###Supplementary Table S1: Collection of alternative acceptor splice site (3'ss) and controls AG (n = 103,972), from RNA-seq data ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= #chr Pos_hg19 Strand Transcript Gene UsedSite Expression_Average_(%) Expression_Average_(read) nbSamp MES SSF bp_pos bp_zsc BPP_class ss_dist svm_scr SVM_class branchpoint_dist branchpoint_prob branchpoint_class LB_pos LB_score LB_class RNABPS_pos RNABPS_score RNABPS_class Cum_class chr22 43089999 - NM_017436 A4GALT 1 0.54 0.15 8 -1.91 0 77 7.94 Yes 17 1.34 Yes 0 0 No -29 0.91 Yes 41 91.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43090677 - NM_017436 A4GALT 1 1.7 0.49 25 6.07 0 17 4.58 No 23 0.64 No 0 0 No -19 0.63 No 54 73.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 43109336 - NM_017436 A4GALT 1 0.5 0.11 7 11.3 97.1 38 6.16 Yes 40 -1.68 No 0 0 No -31 0.33 No 47 63.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 43109983 - NM_017436 A4GALT 1 1 0.17 9 7.73 86.87 26 8 Yes 13 1.41 Yes 0 0 No -25 0.91 Yes 45 95.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43114593 - NM_017436 A4GALT 1 2.39 0.42 23 8.94 94.37 24 6.71 Yes 11 1.48 Yes 0 0 No -23 0.89 Yes 47 89.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53701701 - NM_001173466 AAAS 1 0.79 1.11 45 1.74 78.74 16 4.69 No 15 1.93 Yes 0 0 No -57 0.67 Yes 43 87.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53701711 - NM_001173466 AAAS 1 1.92 2.74 66 -2.82 0 18 7.35 Yes 5 1.97 Yes 0 0 No -24 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 53701756 - NM_001173466 AAAS 1 0.61 0.96 39 3.75 75.72 45 6.93 Yes 32 1.53 Yes 28 0.33 Yes -30 0.48 No 40 35.94 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 53702121 - NM_001173466 AAAS 1 0.31 0.39 20 -6.03 57.92 22 4.68 No 19 2.11 Yes 0 0 No -42 0.65 No 28 54.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 53702636 - NM_001173466 AAAS 1 1.43 1.11 42 6.97 76.18 51 8.74 Yes 38 1.32 Yes 32 0.33 Yes -26 0.52 No 44 55.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 53708628 - NM_001173466 AAAS 1 1.38 0.13 7 -0.3 0 9 3.87 No 7 1.81 Yes 30 0.53 Yes -25 0.83 Yes 45 87.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53708634 - NM_001173466 AAAS 1 1723.67 134.07 72 8.47 76.44 14 6.03 Yes 1 1.84 Yes 27 0.61 Yes -19 0.77 Yes 51 84.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53709271 - NM_001173466 AAAS 1 0.14 0.21 14 7.59 80.02 27 6.04 Yes 48 -1.34 No 30 0.38 Yes -26 0.75 Yes 40 53.26 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 125562641 + NM_023928 AACS 1 0.65 0.56 28 8.39 74.36 26 5.35 No -3 0.89 Yes 25 0.96 Yes -25 0.96 Yes 45 98.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 125566742 + NM_023928 AACS 1 0.16 0.13 8 2.52 0 27 6.24 Yes 14 1.42 Yes 0 0 No -26 0.83 Yes 44 87.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 125593722 + NM_023928 AACS 1 0.57 0.42 20 6.77 91.06 15 4.86 No 63 1.33 Yes 0 0 No -26 0.74 Yes 44 64.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 125594107 + NM_023928 AACS 1 0.29 0.22 11 7.31 84.92 25 6.35 Yes 12 1.09 Yes 0 0 No -28 0.57 No 46 55.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 125612766 + NM_023928 AACS 1 0.93 0.53 27 5.66 77.71 35 8.09 Yes 73 0.46 No 0 0 No -34 0.77 Yes 36 88.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 125613885 + NM_023928 AACS 1 0.19 0.11 7 -2.98 0 28 7.93 Yes 8 0.51 No 0 0 No -27 0.79 Yes 43 93.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 99408302 - NM_153698 AAED1 1 0.62 0.14 10 -0.76 0 28 5.74 Yes 39 -4.23 No 0 0 No -27 0.61 No 43 70.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 67495931 - NM_001271886 AAGAB 1 0.07 0.13 8 -1.82 0 25 4.84 No 39 -1.62 No 0 0 No -25 0.92 Yes 45 90.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 67497385 - NM_001271886 AAGAB 1 1.02 1.71 54 8.93 86.45 25 6.78 Yes 71 0.93 Yes 0 0 No -24 0.84 Yes 46 82.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 67501879 - NM_001271886 AAGAB 1 0.06 0.13 9 3.59 0 25 5.21 No 12 1.21 Yes 0 0 No -28 0.53 No 46 69.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 67512879 - NM_001271886 AAGAB 1 0.15 0.29 15 12.4 96.37 36 7.08 Yes 72 -3.35 No 27 0.68 Yes -27 0.77 Yes 39 66.66 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 67513540 - NM_001271886 AAGAB 1 0.06 0.13 7 5.87 78.74 15 5.57 Yes 2 1.41 Yes 0 0 No -23 0.68 Yes 40 83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 67519289 - NM_001271886 AAGAB 1 0.36 0.69 33 7.64 92.11 24 5.09 No 11 1.54 Yes 23 0.94 Yes -23 0.88 Yes 47 94.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 67523671 - NM_001271886 AAGAB 1 1.81 3.67 68 -2.02 0 17 4.24 No 4 0.39 No 0 0 No -16 0.87 Yes 54 94.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 67524585 - NM_001271886 AAGAB 1 0.1 0.22 14 4.74 84.41 23 6.56 Yes 10 1.33 Yes 0 0 No -22 0.42 No 48 72.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 69736596 - NM_014911 AAK1 1 47.47 15.28 72 10.07 78.56 47 10.4 Yes 34 1.2 Yes 31 0.63 Yes -28 0.48 No 42 59.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 69737629 - NM_014911 AAK1 1 1.24 0.43 26 7.93 85.69 31 6 Yes 59 -1.13 No 0 0 No -23 0.46 No 47 49.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 69748095 - NM_014911 AAK1 1 0.19 0.21 12 5.09 83.23 23 5.2 No 10 1.47 Yes 0 0 No -22 0.73 Yes 48 80.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 69752224 - NM_014911 AAK1 1 0.09 0.13 7 5.96 70.94 31 5.43 No 50 1.48 Yes 0 0 No -23 0.65 No 45 45.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 69753760 - NM_014911 AAK1 1 0.19 0.24 15 9.07 91.05 34 5.28 No 40 1.23 Yes 0 0 No -33 0.47 No 51 59.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 69758600 - NM_014911 AAK1 1 0.13 0.13 8 6.07 91.99 43 7.39 Yes 30 2.35 Yes 0 0 No -27 0.62 No 43 73.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 69766554 - NM_014911 AAK1 1 0.12 0.11 7 9.33 79.14 20 7.1 Yes 7 1.56 Yes 0 0 No -31 0.91 Yes 39 91.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 69827777 - NM_014911 AAK1 1 0.64 0.4 19 3.06 69.62 45 5.16 No 21 1.22 Yes 0 0 No -33 0.45 No 37 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 69830759 - NM_014911 AAK1 1 1.17 0.75 33 9.47 87.86 53 9.91 Yes 69 1.35 Yes 0 0 No -39 0.65 No 31 55.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 77566390 + NM_001316960 AAMDC 1 2.14 0.4 21 2.94 0 39 6.4 Yes 26 0.83 Yes 0 0 No -38 0.86 Yes 32 84.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219129883 - NM_001087 AAMP 1 0.09 0.18 10 0.55 69.27 24 4.9 No 50 1.04 Yes 0 0 No -49 0.63 No 21 76.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 219134261 - NM_001087 AAMP 1 14.58 31.94 72 4.86 70.97 16 6 Yes 3 2.22 Yes 23 0.7 Yes -61 0.36 No 47 44.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 34830094 + NM_015511 AAR2 1 0.39 0.24 17 4.19 0 43 6.63 Yes 30 0.25 No 0 0 No -37 0.52 No 36 47.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 34834122 + NM_015511 AAR2 1 0.66 0.71 34 4.53 70.52 39 6.61 Yes 26 1.36 Yes 0 0 No -38 0.76 Yes 32 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34843522 + NM_015511 AAR2 1 0.33 0.36 19 10.45 85.78 32 5.65 Yes 33 1.35 Yes 0 0 No -25 0.48 No 29 47.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 70288387 - NM_001605 AARS 1 0.34 1.08 46 9.09 80.5 19 7.81 Yes 6 1.8 Yes 18 0.79 Yes -18 0.72 Yes 52 91.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70292148 - NM_001605 AARS 1 0.1 0.43 23 4.81 77.78 16 4.69 No NA NA NA 29 0.66 Yes -21 0.58 No 49 49.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 70296388 - NM_001605 AARS 1 0.3 0.85 35 5.14 80.26 15 5.72 Yes 66 1.95 Yes 0 0 No -20 0.61 No 50 39.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 70302281 - NM_001605 AARS 1 0.16 0.51 27 -16.96 0 21 5.2 No 42 -1.74 No 0 0 No -20 0.45 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 70303738 - NM_001605 AARS 1 0.05 0.21 10 8.78 88.25 20 6.84 Yes 7 2 Yes 0 0 No -19 0.76 Yes 51 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70304308 - NM_001605 AARS 1 0.05 0.17 11 2.22 73.22 39 6.37 Yes 0 -0.89 No 0 0 No -29 0.42 No 41 54.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 70305792 - NM_001605 AARS 1 0.07 0.28 17 6.99 83.67 26 6.4 Yes 74 -5.84 No 0 0 No -25 0.82 Yes 45 89.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 70311083 - NM_001605 AARS 1 0.03 0.14 7 4.74 64.32 24 6.76 Yes 11 1.31 Yes 22 0.55 Yes -23 0.72 Yes 47 74.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70313557 - NM_001605 AARS 1 0.13 0.57 30 2.11 0 43 7.68 Yes 30 1.47 Yes 0 0 No -43 0.61 No 28 73.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 70319129 - NM_001605 AARS 1 0.05 0.11 7 10.45 88.27 28 5.74 Yes 37 0.7 No 0 0 No -27 0.91 Yes 43 94.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 44270942 - NM_020745 AARS2 1 0.6 0.29 16 8.8 86.18 19 5.66 Yes 71 -1.15 No 26 0.94 Yes -25 0.62 No 45 80.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 44272085 - NM_020745 AARS2 1 0.32 0.17 11 6.72 84.43 29 6.54 Yes 16 1.23 Yes 32 0.68 Yes -28 0.84 Yes 42 89.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 44272252 - NM_020745 AARS2 1 0.99 0.35 19 2.54 73.03 22 5.29 No 25 1.54 Yes 0 0 No -21 0.75 Yes 49 70.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 44272255 - NM_020745 AARS2 1 0.34 0.13 8 2.3 79.01 19 5 No 22 1.53 Yes 0 0 No -34 0.51 No 52 71.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 44273787 - NM_020745 AARS2 1 2.29 0.64 32 10.67 83.32 28 5.3 No NA NA NA 0 0 No -23 0.64 No 48 75.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 44274289 - NM_020745 AARS2 1 1.39 0.79 32 6.21 78.71 13 6.71 Yes 0 0.82 Yes 21 0.91 Yes -18 0.21 No 13 60.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 41107385 - NM_001261434 AARSD1 1 2.01 1.58 51 8.79 88.12 25 6.24 Yes 12 0.78 Yes 24 0.86 Yes -24 0.9 Yes 46 90.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 41108343 - NM_001261434 AARSD1 1 0.18 0.14 7 -4.49 70.61 26 5.29 No 29 0.73 No 0 0 No -25 0.9 Yes 45 84.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41114290 - NM_001261434 AARSD1 1 0.15 0.11 8 7.17 87.81 26 5.66 Yes 36 1.01 Yes 25 0.81 Yes -25 0.54 No 22 35.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 41114313 - NM_001261434 AARSD1 1 0.39 0.26 16 4.74 84.41 30 5.35 No 13 1.03 Yes 25 0.49 Yes -25 0.29 No 45 40.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 57219678 - NM_001323890 AASDH 1 2.02 0.42 21 4.62 69.01 37 5.81 Yes 10 0.66 No 0 0 No -22 0.61 No 34 54.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 57247242 - NM_001323890 AASDH 1 2 0.35 16 2.2 77.46 24 3.69 No -4 0.25 No 0 0 No -29 0.57 No 47 33.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 57249196 - NM_001323890 AASDH 1 0.39 0.17 10 6.3 90.92 23 4.97 No 3 0.8 Yes 0 0 No -27 0.46 No 43 51.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 105950896 + NM_015423 AASDHPPT 1 0.1 0.19 11 11.37 78.32 26 5.39 No 28 0.93 Yes 0 0 No -25 0.84 Yes 45 71.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 105963691 + NM_015423 AASDHPPT 1 0.04 0.14 8 6.54 90.79 18 6.36 Yes 5 1.18 Yes 0 0 No -22 0.5 No 48 57.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 35336455 + NM_012138 AATF 1 0.18 0.39 22 4.54 83.68 33 7.79 Yes 20 2.04 Yes 0 0 No -32 0.86 Yes 38 81.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 35351397 + NM_012138 AATF 1 0.23 0.6 26 7.57 82.53 29 4.69 No 4 0.78 Yes 0 0 No -28 0.68 Yes 47 75.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 35352558 + NM_012138 AATF 1 0.17 0.46 17 8.5 88.34 43 5.7 Yes 21 0.93 Yes 0 0 No -33 0.75 Yes 37 82.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 35354150 + NM_012138 AATF 1 0.1 0.28 16 11.27 94.35 22 6.23 Yes -1 1 Yes 0 0 No -21 0.49 No 49 39.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 35378236 + NM_012138 AATF 1 0.05 0.15 8 1.46 0 27 4.82 No 40 0.73 No 0 0 No -29 0.37 No 44 63.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 67260478 - NM_172232 ABCA5 1 0.32 0.11 7 3.23 71.31 28 6.15 Yes 15 1 Yes 0 0 No -28 0.56 No 42 77.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 67260935 - NM_172232 ABCA5 1 1.14 0.28 15 5.99 80.72 40 7.46 Yes 27 1.22 Yes 0 0 No -29 0.75 Yes 41 74.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67261016 - NM_172232 ABCA5 1 6.13 1.49 49 7.61 84.58 22 4.32 No 41 0.5 No 0 0 No -21 0.84 Yes 49 91.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 67261016 - NM_172232 ABCA5 1 0.79 0.17 8 7.61 84.58 22 4.32 No 41 0.5 No 0 0 No -21 0.84 Yes 49 91.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 67281562 - NM_172232 ABCA5 1 10.29 4.81 69 9.09 84.85 27 4.71 No 8 0.93 Yes 26 0.89 Yes -26 0.57 No 50 72.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 67284840 - NM_172232 ABCA5 1 0.34 0.21 11 9.23 87.72 66 8.75 Yes 53 1.86 Yes 0 0 No -59 0.68 Yes 11 67.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 67294159 - NM_172232 ABCA5 1 0.45 0.14 9 9.06 93.53 21 5.45 No 12 1.59 Yes 0 0 No -24 0.75 Yes 46 80.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67300176 - NM_172232 ABCA5 1 0.5 0.31 17 2.38 0 48 11.41 Yes 52 1.35 Yes 0 0 No -28 0.53 No 42 58.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 67306576 - NM_172232 ABCA5 1 0.64 0.33 22 4.84 98.31 20 4.68 No 7 0.45 No 0 0 No -23 0.86 Yes 47 91.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 67307168 - NM_172232 ABCA5 1 2.75 1.78 52 6.53 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.66 No 51 85.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 67309391 - NM_172232 ABCA5 1 0.42 0.14 9 1.55 65.35 55 7.33 Yes 59 0.75 No 0 0 No -33 0.54 No 37 66.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 67313965 - NM_172232 ABCA5 1 4.56 0.31 16 1.06 0 23 6.07 Yes 10 2.14 Yes 22 0.82 Yes -22 0.76 Yes 48 87.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 67321953 - NM_172232 ABCA5 1 2.95 0.1 7 -7.55 0 10 3.84 No -2 -1.96 No 0 0 No -41 0.39 No 29 53.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 67321959 - NM_172232 ABCA5 1 100.27 7.07 71 6.17 84.22 31 5.45 No 31 -1.46 No 24 0.61 Yes -24 0.51 No 35 44.75 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 67075424 - NM_080284 ABCA6 1 0.13 0.11 8 1.29 64.75 29 5.18 No 65 0.85 Yes 24 0.89 Yes -21 0.36 No 49 44.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 67077316 - NM_080284 ABCA6 1 0.31 0.33 20 5.22 74.13 29 7.84 Yes 16 1.95 Yes 24 0.85 Yes -34 0.45 No 36 59.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 67079469 - NM_080284 ABCA6 1 0.09 0.1 7 0.37 0 24 4.2 No 11 0.77 No 0 0 No -39 0.6 No 31 69.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 67080518 - NM_080284 ABCA6 1 0.23 0.17 11 -4.93 0 14 3.54 No 65 -5.48 No 27 0.57 Yes -14 0.56 No 61 34.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 67080644 - NM_080284 ABCA6 1 1.98 0.83 38 0.91 0 36 6.09 Yes 71 1.83 Yes 0 0 No -35 0.85 Yes 35 92.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67084362 - NM_080284 ABCA6 1 1.56 1.13 42 7.91 81.92 29 5.72 Yes 30 0.89 Yes 0 0 No -28 0.76 Yes 42 84.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67092208 - NM_080284 ABCA6 1 0.19 0.17 11 0.49 76.04 21 4.84 No 0 0.73 No 0 0 No -19 0.35 No 38 50.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 67101640 - NM_080284 ABCA6 1 1 0.58 27 3.98 77.77 42 7.79 Yes 55 -2.99 No 0 0 No -42 0.43 No 28 40.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 67102731 - NM_080284 ABCA6 1 0.57 0.71 34 6.14 84.41 40 7.78 Yes 15 0.81 Yes 0 0 No -26 0.35 No 44 36.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 67106034 - NM_080284 ABCA6 1 0.9 0.81 39 12.49 96.68 17 3.96 No 4 1.06 Yes 0 0 No -25 0.71 Yes 47 45.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 67106559 - NM_080284 ABCA6 1 0.45 0.39 20 4.21 74.98 32 5.89 Yes 19 1.36 Yes 0 0 No -31 0.89 Yes 39 94.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67107073 - NM_080284 ABCA6 1 0.12 0.19 12 -0.34 0 18 4.21 No 22 1.1 Yes 0 0 No -30 0.85 Yes 40 82.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67108411 - NM_080284 ABCA6 1 1.26 0.72 34 0.47 0 44 7.54 Yes 74 1.44 Yes 0 0 No -43 0.69 Yes 27 76.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67108411 - NM_080284 ABCA6 1 0.66 0.33 18 0.47 0 44 7.54 Yes 74 1.44 Yes 0 0 No -43 0.69 Yes 27 76.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67109455 - NM_080284 ABCA6 1 1.47 1.54 50 5.3 86.31 32 5.39 No 46 0.22 No 0 0 No -26 0.53 No 44 43.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 67109489 - NM_080284 ABCA6 1 0.52 0.61 29 5.48 81.7 22 4.69 No 67 0.51 No 0 0 No -24 0.83 Yes 46 67.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1041353 + NM_019112 ABCA7 1 4 0.83 33 7.06 77.87 27 7.14 Yes 14 2.38 Yes 26 0.95 Yes -26 0.86 Yes 44 89.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1041514 + NM_019112 ABCA7 1 0.89 0.25 12 -0.14 0 9 3.87 No 73 0.15 No 26 0.73 Yes -32 0.59 No 38 76.24 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 1042284 + NM_019112 ABCA7 1 0.88 0.28 15 4.8 74.69 13 4.25 No 6 0.42 No 25 0.64 Yes -18 0.76 Yes 52 80.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1042318 + NM_019112 ABCA7 1 2.8 0.92 39 -0.61 0 31 6.47 Yes 40 0.56 No 0 0 No -25 0.58 No 40 61.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1047210 + NM_019112 ABCA7 1 0.6 0.1 7 6.29 85.23 31 5.77 Yes 64 1.41 Yes 0 0 No -34 0.75 Yes 36 83.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1049316 + NM_019112 ABCA7 1 8.98 1.63 52 9.44 83.09 24 5.48 No 60 1.08 Yes 0 0 No -23 0.87 Yes 47 83.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1056416 + NM_019112 ABCA7 1 10.54 1.83 59 9.49 85.69 13 6.33 Yes 0 1.83 Yes 0 0 No -31 0.55 No 39 50.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1057864 + NM_019112 ABCA7 1 4.54 1.08 42 7.09 95.4 12 5.1 No 36 -2.28 No 0 0 No -24 0.72 Yes 46 54.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1057967 + NM_019112 ABCA7 1 14.92 3.44 64 8.08 83.06 28 5.83 Yes 23 1.83 Yes 27 0.77 Yes -27 0.7 Yes 43 66.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 1057972 + NM_019112 ABCA7 1 1.1 0.22 12 1.71 0 33 6.24 Yes 28 1.82 Yes 0 0 No -32 0.67 Yes 38 66.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1058803 + NM_019112 ABCA7 1 0.74 0.19 11 1.98 0 10 2.7 No 42 -3.99 No 24 0.78 Yes -15 0.32 No 60 24.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1061966 + NM_019112 ABCA7 1 0.93 0.19 10 7.83 80.85 35 7.35 Yes 22 2.55 Yes 0 0 No -34 0.89 Yes 36 90.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229654601 - NM_012089 ABCB10 1 0.29 0.24 14 7.31 81.17 25 4.93 No 47 0.96 Yes 0 0 No -49 0.47 No 16 46.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 229657142 - NM_012089 ABCB10 1 0.14 0.13 9 0.48 0 16 4.35 No 3 0.22 No 0 0 No -15 0.81 Yes 55 70.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 229657393 - NM_012089 ABCB10 1 0.27 0.21 13 -1.5 0 24 5.48 No 24 0.69 No 33 0.51 Yes -23 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 229666084 - NM_012089 ABCB10 1 0.27 0.17 9 7.41 89.27 25 5.05 No 69 -4.7 No 0 0 No -24 0.51 No 45 61.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 229674655 - NM_012089 ABCB10 1 1.6 0.79 33 3.73 70.31 36 5.16 No 16 0.42 No 0 0 No -28 0.91 Yes 42 92.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 229676496 - NM_012089 ABCB10 1 1.97 1.53 55 2.14 0 43 7.46 Yes 30 1.24 Yes 0 0 No -27 0.47 No 43 42.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 229685332 - NM_012089 ABCB10 1 1.02 0.21 12 -0.51 0 34 7.67 Yes 48 1.44 Yes 0 0 No -33 0.96 Yes 37 96.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87048336 - NM_018849 ABCB4 1 1.99 0.22 12 7.34 80.48 31 4.58 No 4 0.3 No 0 0 No -28 0.45 No 47 55.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 87081034 - NM_018849 ABCB4 1 5.92 0.44 22 5.89 92.59 25 4.8 No 76 0.82 Yes 0 0 No -24 0.72 Yes 50 47.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 87081034 - NM_018849 ABCB4 1 2.25 0.24 12 5.89 92.59 25 4.8 No 76 0.82 Yes 0 0 No -24 0.72 Yes 50 47.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 220074993 - NM_005689 ABCB6 1 0.56 0.43 24 2.3 71.46 38 6.06 Yes 32 1.49 Yes 0 0 No -22 0.79 Yes 48 62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 220075312 - NM_005689 ABCB6 1 0.54 0.36 20 3.44 73.19 19 6.38 Yes 64 0.84 Yes 0 0 No -18 0.45 No 52 80.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 220075539 - NM_005689 ABCB6 1 0.12 0.1 7 -4.33 0 12 4 No 46 2.52 Yes 0 0 No -58 0.62 No 12 59.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220075572 - NM_005689 ABCB6 1 1.32 0.81 37 1.71 72.83 26 6.01 Yes 13 2.56 Yes 25 0.94 Yes -25 0.55 No 45 55.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 74282995 - NM_001271698 ABCB7 1 0.55 0.51 30 8.81 83.26 22 6.34 Yes 9 0.83 Yes 0 0 No -21 0.72 Yes 34 38.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 74285021 - NM_001271698 ABCB7 1 0.16 0.18 10 -1.83 62 38 7.92 Yes 25 0.7 No 0 0 No -23 0.29 No 38 61.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 74285021 - NM_001271698 ABCB7 1 0.93 0.99 43 -1.83 62 38 7.92 Yes 25 0.7 No 0 0 No -23 0.29 No 38 61.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 74291540 - NM_001271698 ABCB7 1 0.4 0.22 13 4.29 73.93 38 4.21 No 5 0.79 Yes 32 0.59 Yes -33 0.56 No 37 55.56 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 74317374 - NM_001271698 ABCB7 1 0.49 0.42 22 6.09 85.75 40 5.52 No 54 0.55 No 0 0 No -28 0.7 Yes 42 89.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 150734327 + NM_001282291 ABCB8 1 21.2 6.56 72 7.46 81.45 34 7.45 Yes 21 1.23 Yes 20 0.8 Yes -33 0.85 Yes 37 87.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 150734370 + NM_001282291 ABCB8 1 7.31 2.32 57 7.33 89.74 46 7.14 Yes 64 1.23 Yes 28 0.76 Yes -28 0.62 No 25 81.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 16110418 + NM_004996 ABCC1 1 0.18 0.22 12 9.5 87.04 42 7.67 Yes 29 1.42 Yes 0 0 No -29 0.57 No 29 65.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 16110440 + NM_004996 ABCC1 1 0.32 0.38 22 10.09 85.26 29 5.56 No 51 1.41 Yes 0 0 No -28 0.95 Yes 42 97.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 16127145 + NM_004996 ABCC1 1 4.47 2.54 55 10.82 89.81 43 6.04 Yes 30 1.68 Yes 0 0 No -28 0.61 No 28 68.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 16134973 + NM_004996 ABCC1 1 2.19 2.13 54 10.07 88.27 24 7.42 Yes 11 1.47 Yes 0 0 No -23 0.92 Yes 47 94.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 16138310 + NM_004996 ABCC1 1 0.17 0.18 9 3.62 0 22 6.74 Yes 9 1.08 Yes 0 0 No -30 0.76 Yes 40 55.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 16151287 + NM_004996 ABCC1 1 0.12 0.18 10 10.78 85.36 29 5.42 No 16 0.32 No 0 0 No -28 0.91 Yes 42 91.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 16192729 + NM_004996 ABCC1 1 0.92 0.63 30 6.08 87.97 30 7.41 Yes 68 1.05 Yes 30 0.85 Yes -29 0.61 No 41 59.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 16197749 + NM_004996 ABCC1 1 0.68 0.54 29 -0.31 0 17 4.12 No 4 0.43 No 0 0 No -16 0.94 Yes 54 65.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 16199256 + NM_004996 ABCC1 1 0.18 0.17 10 7.72 88.31 15 6.68 Yes 2 1.44 Yes 21 0.62 Yes -21 0.7 Yes 49 54.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 16228518 + NM_004996 ABCC1 1 0.32 0.24 11 9.03 88.34 44 9.84 Yes 31 0.99 Yes 0 0 No -43 0.96 Yes 27 97.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43398485 + NM_001198934 ABCC10 1 14.74 1.32 53 7.64 93.81 25 7.21 Yes 47 1.4 Yes 24 0.71 Yes -24 0.78 Yes 46 70.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 43400969 + NM_001198934 ABCC10 1 0.9 0.1 7 4.64 73.46 54 7.19 Yes 9 0.86 Yes 24 0.71 Yes -32 0.77 Yes 49 59.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 43400972 + NM_001198934 ABCC10 1 4.51 0.42 25 6.79 82.6 57 7.37 Yes 12 0.85 Yes 24 0.71 Yes -24 0.69 Yes 46 73.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 43403830 + NM_001198934 ABCC10 1 3.1 0.83 39 8.43 79.6 20 4.18 No 12 0.13 No 24 0.76 Yes -22 0.56 No 48 69.79 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 43406008 + NM_001198934 ABCC10 1 3.23 0.92 39 4.15 0 15 4.58 No 2 0.15 No 0 0 No -20 0.65 No 50 66.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43406074 + NM_001198934 ABCC10 1 4.32 1.21 51 2.59 83.23 21 4.8 No 68 0.09 No 0 0 No -20 0.94 Yes 50 89.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43410650 + NM_001198934 ABCC10 1 0.59 0.22 13 -0.36 71.73 26 6.39 Yes 58 1.78 Yes 0 0 No -25 0.9 Yes 45 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43411639 + NM_001198934 ABCC10 1 0.7 0.17 10 -7.27 0 9 4.47 No 64 -5.68 No 22 0.53 Yes -28 0.43 No 59 34.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 43412909 + NM_001198934 ABCC10 1 0.47 0.14 10 6.17 75.49 25 5.18 No 44 0.52 No 0 0 No -28 0.52 No 47 41.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43412981 + NM_001198934 ABCC10 1 2.76 0.69 35 8.11 82.3 29 8.96 Yes 62 0.74 No 0 0 No -28 0.36 No 41 44.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43413552 + NM_001198934 ABCC10 1 0.76 0.25 15 5.59 75.81 25 4.51 No 12 -1.42 No 0 0 No -24 0.73 Yes 46 78.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43414288 + NM_001198934 ABCC10 1 3.04 0.61 30 6.58 83.31 14 6.01 Yes 73 1.98 Yes 0 0 No -33 0.46 No 37 62.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43415243 + NM_001198934 ABCC10 1 1.74 0.36 19 7.36 81.68 37 7.28 Yes 24 1.54 Yes 0 0 No -36 0.92 Yes 34 96.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 95676454 - NM_005845 ABCC4 1 0.19 0.13 8 3.06 0 32 6.4 Yes 19 1.78 Yes 0 0 No -35 0.53 No 35 69.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 95690991 - NM_005845 ABCC4 1 1.33 0.88 35 9.04 85.52 31 6.87 Yes 18 1.41 Yes 0 0 No -30 0.61 No 40 68.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 95691861 - NM_005845 ABCC4 1 0.55 0.4 22 8.39 80.2 25 6.08 Yes 27 1.02 Yes 0 0 No -25 0.57 No 46 42.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 95696717 - NM_005845 ABCC4 1 0.4 0.24 13 -2.78 68.12 12 4.55 No 19 0.83 Yes 22 0.64 Yes -24 0.35 No 23 22.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 95698297 - NM_005845 ABCC4 1 0.86 0.51 28 8.49 88.14 26 5.98 Yes 13 1.39 Yes 0 0 No -25 0.66 No 45 76.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 95714234 - NM_005845 ABCC4 1 0.24 0.18 10 11.43 90.56 30 8.31 Yes 17 1.84 Yes 0 0 No -29 0.84 Yes 41 84.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 95727765 - NM_005845 ABCC4 1 0.81 0.65 35 9.49 93.42 17 6.08 Yes 56 1.61 Yes 0 0 No -31 0.69 Yes 39 61.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 95748434 - NM_005845 ABCC4 1 13.87 7.86 72 10.74 86.37 27 6.48 Yes 51 1.16 Yes 26 0.52 Yes -26 0.88 Yes 44 68.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 95757358 - NM_005845 ABCC4 1 2.16 1.18 49 9.97 79.76 32 6.72 Yes 19 1.51 Yes 0 0 No -31 0.8 Yes 39 92.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 95765819 - NM_005845 ABCC4 1 0.41 0.28 14 9.33 82.63 29 5.44 No 49 1.12 Yes 0 0 No -28 0.77 Yes 42 82.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 95809577 - NM_005845 ABCC4 1 1.26 0.97 39 7.28 85.02 26 7.55 Yes 13 1.48 Yes 0 0 No -25 0.93 Yes 45 94.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 95830043 - NM_005845 ABCC4 1 2.57 1.57 55 1.01 0 27 6.21 Yes 14 1.6 Yes 0 0 No -26 0.91 Yes 44 91.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 95858970 - NM_005845 ABCC4 1 0.2 0.13 9 7.82 87.16 21 5.58 Yes 32 0.31 No 0 0 No -29 0.73 Yes 41 80.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 95861566 - NM_005845 ABCC4 1 2.38 1.03 37 8.82 78.1 38 7.48 Yes 25 1.19 Yes 0 0 No -37 0.79 Yes 33 80.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 95872432 - NM_005845 ABCC4 1 0.9 0.53 28 5.97 79.63 39 5.08 No 0 0.41 No 0 0 No -26 0.92 Yes 44 91.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 95918519 - NM_005845 ABCC4 1 10.74 4.06 69 12.09 91.25 34 7.53 Yes 38 0.75 No 33 0.74 Yes -33 0.83 Yes 37 94.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 95921677 - NM_005845 ABCC4 1 6.88 2.31 54 2.17 83.95 99 9.78 Yes 39 0.05 No 26 0.28 Yes -26 0.3 No 44 33.08 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153002095 + NM_000033 ABCD1 1 2.13 0.13 8 5.91 75.11 37 6.13 Yes 60 2.71 Yes 0 0 No -36 0.74 Yes 38 76.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 39966845 - NM_005164 ABCD2 1 4.01 0.68 31 10.16 90.58 18 5.83 Yes 5 1.38 Yes 0 0 No -27 0.69 Yes 43 64.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 39966912 - NM_005164 ABCD2 1 10.76 1.6 57 8.27 96.71 27 4.77 No 58 0.95 Yes 0 0 No -26 0.42 No 46 39.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 39971315 - NM_005164 ABCD2 1 1.92 0.24 14 8.02 90.88 22 5 No 25 0.71 No 0 0 No -21 0.65 No 44 62.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 39980127 - NM_005164 ABCD2 1 3.02 0.56 27 8.21 79.22 27 3.77 No 44 1.73 Yes 32 0.24 Yes -26 0.68 Yes 44 66.31 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 39987566 - NM_005164 ABCD2 1 2.62 0.42 21 5.01 88.31 25 5.09 No 37 -1.75 No 0 0 No -25 0.28 No 48 23.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 39991306 - NM_005164 ABCD2 1 0.86 0.17 10 7.92 84.43 28 6.48 Yes 52 1.39 Yes 0 0 No -27 0.88 Yes 43 86.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 94921288 + NM_002858 ABCD3 1 4.04 2.17 58 4.09 71.09 20 4.08 No 69 -5.84 No 29 0.66 Yes -29 0.73 Yes 41 77.99 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 94925883 + NM_002858 ABCD3 1 0.28 0.19 11 12.19 89.72 25 6.98 Yes 70 1.07 Yes 0 0 No -24 0.67 Yes 46 53.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 94944079 + NM_002858 ABCD3 1 10.48 11.56 71 7.96 79.53 30 6.56 Yes 17 1.45 Yes 29 0.92 Yes -29 0.8 Yes 41 88.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 94946964 + NM_002858 ABCD3 1 0.65 0.65 31 7.13 90.95 21 4.86 No 60 1.04 Yes 0 0 No -20 0.78 Yes 50 69.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 94972051 + NM_002858 ABCD3 1 0.18 0.22 13 8.69 81.33 32 5.73 Yes 61 0.66 No 27 0.73 Yes -31 0.73 Yes 39 79.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 74755989 - NR_003256 ABCD4 1 5.6 1.19 46 7.38 85.44 24 5.85 Yes 11 1.72 Yes 23 0.93 Yes -23 0.96 Yes 47 95.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 74756886 - NR_003256 ABCD4 1 0.37 0.13 7 -12.62 0 28 6.4 Yes 41 -0.99 No 0 0 No -32 0.51 No 38 34.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74756890 - NR_003256 ABCD4 1 0.43 0.15 11 0.52 60.97 24 6.08 Yes 37 -0.98 No 0 0 No -28 0.51 No 42 51.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74762678 - NR_003256 ABCD4 1 9.4 1.88 56 2.48 0 43 7.81 Yes 56 0.23 No 18 0.08 Yes -33 0.47 No 30 71.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 146025540 + NM_002940 ABCE1 1 7.48 24.08 72 1.51 79.6 37 7.42 Yes 24 0.98 Yes 33 0.53 Yes -36 0.7 Yes 34 89.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 146029167 + NM_002940 ABCE1 1 0.03 0.17 12 -16.79 0 35 6.8 Yes 10 0.68 No 21 0.54 Yes -34 0.44 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 146036434 + NM_002940 ABCE1 1 0.2 0.74 33 7.78 79 26 6.16 Yes 13 1.68 Yes 0 0 No -25 0.94 Yes 45 92.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 146038446 + NM_002940 ABCE1 1 0.08 0.28 14 -13.88 0 23 5.1 No 10 0.3 No 0 0 No -26 0.76 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 146041119 + NM_002940 ABCE1 1 1.02 3.11 68 5.39 83.21 32 6.38 Yes 60 1.31 Yes 0 0 No -28 0.41 No 42 57.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 146041158 + NM_002940 ABCE1 1 0.09 0.29 15 4.25 78.76 15 5.28 No 58 0.26 No 0 0 No -25 0.89 Yes 45 91.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 146042457 + NM_002940 ABCE1 1 0.2 1.01 41 -3.63 0 15 4 No 49 1.13 Yes 23 0.35 Yes -61 0.46 No 49 48.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 146042755 + NM_002940 ABCE1 1 0.03 0.18 11 3.17 70.84 31 5.94 Yes 48 0.78 Yes 31 0.68 Yes -31 0.81 Yes 39 91.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 146044630 + NM_002940 ABCE1 1 0.02 0.15 11 -12.54 0 14 4.33 No 45 0.09 No 0 0 No -27 0.84 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 146049216 + NM_002940 ABCE1 1 0.04 0.17 10 9.09 92.11 34 4.07 No 9 0.11 No 0 0 No -30 0.43 No 40 67.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 150911292 - NM_007189 ABCF2 1 0.1 0.24 12 -8.17 0 9 4.05 No 43 -3.26 No 21 0.93 Yes -19 0.52 No 63 27.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 150912186 - NM_007189 ABCF2 1 0.3 0.93 41 -1.04 0 19 4.36 No 75 -5.56 No 23 0.83 Yes -18 0.81 Yes 52 58.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 150914875 - NM_007189 ABCF2 1 0.4 1.15 39 6.24 88.76 34 5.93 Yes 21 0.52 No 0 0 No -33 0.45 No 40 62.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 150922069 - NM_007189 ABCF2 1 0.09 0.28 12 -4.47 0 15 3.87 No 28 1.57 Yes 0 0 No -40 0.86 Yes 30 95.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 150923618 - NM_007189 ABCF2 1 2.19 4.14 68 -6.2 0 15 4.24 No 62 -3.85 No 33 0.45 Yes -14 0.65 No 56 62.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 183905151 + NM_018358 ABCF3 1 0.97 0.99 43 8.02 90.31 18 4.36 No 13 0.42 No 25 0.72 Yes -25 0.9 Yes 45 74.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183906381 + NM_018358 ABCF3 1 0.19 0.15 10 11.41 87.87 27 6.15 Yes 42 0.29 No 0 0 No -26 0.88 Yes 44 90.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 183907021 + NM_018358 ABCF3 1 0.2 0.19 10 4.79 73.34 15 5.36 No 2 1.15 Yes 23 0.87 Yes -13 0.49 No 56 47.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 183907152 + NM_018358 ABCF3 1 0.42 0.4 19 4.35 71.01 18 4.62 No 51 0.06 No 26 0.64 Yes -17 0.54 No 53 57.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 183907366 + NM_018358 ABCF3 1 0.3 0.33 17 4.5 70.24 32 5.54 No 52 1.78 Yes 0 0 No -24 0.84 Yes 46 74.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 183907408 + NM_018358 ABCF3 1 0.12 0.14 8 4 77.83 31 4.95 No 61 0.82 Yes 22 0.45 Yes -25 0.63 No 40 55.23 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 111702868 + NM_001272069 ABHD10 1 0.09 0.11 8 5.37 84.16 30 4.85 No 50 0.66 No 0 0 No -29 0.46 No 41 84.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 111705303 + NM_001272069 ABHD10 1 0.09 0.11 8 2.91 83.57 34 5.55 No 33 1.74 Yes 0 0 No -34 0.71 Yes 36 92.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73152403 - NM_148913 ABHD11 1 1.68 0.31 18 6.04 81.14 23 5.29 No 72 -2.53 No 25 0.8 Yes -25 0.71 Yes 45 81.99 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 73152473 - NM_148913 ABHD11 1 4.87 0.65 34 6.79 73.73 56 6.24 Yes 19 1.68 Yes 31 0.92 Yes -31 0.83 Yes 39 89.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 25282015 - NM_001042472 ABHD12 1 0.23 0.25 15 9.28 95.64 23 4.66 No 64 1.11 Yes 0 0 No -23 0.69 Yes 47 62.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 25282975 - NM_001042472 ABHD12 1 0.16 0.19 12 1.78 0 11 4.12 No 12 2.46 Yes 0 0 No -32 0.81 Yes 38 70.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 25287550 - NM_001042472 ABHD12 1 0.16 0.15 9 -9.67 0 28 8.99 Yes 48 1.55 Yes 0 0 No -27 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 25288680 - NM_001042472 ABHD12 1 0.28 0.31 20 -1.01 82.14 25 5.46 No 12 0.89 Yes 0 0 No -24 0.89 Yes 46 89.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 25299792 - NM_001042472 ABHD12 1 1.32 1.11 44 -0.46 58.83 29 5.48 No 16 0.53 No 0 0 No -28 0.8 Yes 42 58.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 25319641 - NM_001042472 ABHD12 1 1.36 1.86 54 4.82 71.53 31 5.57 Yes 51 -2.28 No 24 0.61 Yes -30 0.52 No 42 35.87 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 25369796 - NM_001042472 ABHD12 1 0.41 0.18 10 5.61 83 33 4.99 No 65 1.38 Yes 0 0 No -24 0.52 No 38 48.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 108881771 + NM_032859 ABHD13 1 0.9 0.31 17 9.61 92.06 31 5.57 Yes 59 0.56 No 0 0 No -24 0.42 No 49 37.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52021932 + NM_001316331 ABHD14A-ACY1 1 0.46 0.15 10 3.56 81.52 25 5.1 No 2 1.32 Yes 0 0 No -24 0.72 Yes 46 70.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27890401 - NM_198147 ABHD15 1 0.67 0.14 10 11.15 88.27 24 5.92 Yes 11 1.38 Yes 0 0 No -23 0.8 Yes 47 89.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1877223 - NM_031213 ABHD17A 1 0.09 0.1 7 9.06 90.47 10 5.74 Yes -3 -0.46 No 0 0 No -26 0.63 No 44 83.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1877647 - NM_031213 ABHD17A 1 0.18 0.19 11 3.61 76.65 16 5.29 No 49 2.08 Yes 23 0.65 Yes -23 0.56 No 47 36.19 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 1878904 - NM_031213 ABHD17A 1 0.74 0.85 40 9.39 94.48 48 7.35 Yes 35 1.25 Yes 29 0.54 Yes -47 0.67 Yes 23 53.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 74485137 - NM_016014 ABHD17B 1 0.6 0.57 33 -0.68 61.18 26 7.13 Yes 75 0.44 No 0 0 No -25 0.86 Yes 45 69.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 74521541 - NM_016014 ABHD17B 1 0.29 0.14 10 4.58 85.61 12 5.39 No 33 1.04 Yes 0 0 No -28 0.45 No 40 55.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 74521567 - NM_016014 ABHD17B 1 2.78 1.22 48 2.68 0 20 4.47 No 7 1.03 Yes 0 0 No -19 0.86 Yes 51 95.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 74521700 - NM_016014 ABHD17B 1 0.43 0.15 9 -2.9 0 60 7.87 Yes 47 1.75 Yes 0 0 No -59 0.76 Yes 11 69.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 74521704 - NM_016014 ABHD17B 1 1.35 0.6 33 -0.65 59.38 56 7.62 Yes 43 1.76 Yes 0 0 No -55 0.82 Yes 15 79.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 81026350 + NM_021214 ABHD17C 1 0.89 0.21 10 7.3 92.99 62 5.89 Yes 49 1.27 Yes 0 0 No -31 0.28 No 39 51.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 128887108 + NM_001319305 ABHD18 1 3.46 1.46 51 9.58 88.91 31 6 Yes -4 0.92 Yes 30 0.86 Yes -30 0.92 Yes 40 70.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 128895091 + NM_001319305 ABHD18 1 0.43 0.19 12 5.54 78.41 19 5 No 6 0.24 No 0 0 No -18 0.54 No 52 79.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 128923125 + NM_001319305 ABHD18 1 1.55 0.17 9 -6.37 77.68 54 7.23 Yes 41 0.42 No 0 0 No -53 0.41 No 17 55.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 128923823 + NM_001319305 ABHD18 1 1.97 0.19 12 1.51 0 27 6.24 Yes 14 1.06 Yes 0 0 No -26 0.93 Yes 44 86.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128930703 + NM_001319305 ABHD18 1 16.26 6.86 70 0.04 0 14 5.28 No 1 0.94 Yes 25 0.7 Yes -25 0.53 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 128933155 + NM_001319305 ABHD18 1 2.71 0.93 41 3.8 84.41 30 6.22 Yes 14 0.68 No 0 0 No -25 0.26 No 41 46.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 128933161 + NM_001319305 ABHD18 1 2.5 0.82 39 -0.68 0 9 3.87 No 20 0.67 No 0 0 No -31 0.28 No 35 48.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 128938512 + NM_001319305 ABHD18 1 1.42 0.44 25 2.58 86.57 26 7.01 Yes 13 0.78 Yes 25 0.47 Yes -25 0.71 Yes 45 72.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 128942278 + NM_001319305 ABHD18 1 0.27 0.1 7 4.62 71.69 23 4.75 No 13 -1.52 No 20 0.87 Yes -25 0.94 Yes 45 91.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 128949633 + NM_001319305 ABHD18 1 0.84 0.35 19 4.08 0 32 7.57 Yes 19 1.12 Yes 0 0 No -35 0.64 No 35 57.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 128949633 + NM_001319305 ABHD18 1 2.04 0.83 40 4.08 0 32 7.57 Yes 19 1.12 Yes 0 0 No -35 0.64 No 35 57.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 19235045 - NM_138340 ABHD3 1 4.22 4.46 57 7.22 85.58 19 6.43 Yes 44 0.76 No 26 0.81 Yes -26 0.84 Yes 44 86.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 19266651 - NM_138340 ABHD3 1 0.26 0.14 8 4.1 68.26 49 8.23 Yes 36 2.14 Yes 0 0 No -49 0.37 No 38 84.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 19282116 - NM_138340 ABHD3 1 1.55 1.08 48 13.88 97.28 46 5.43 No 33 1.06 Yes 0 0 No -26 0.57 No 44 46.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 19283458 - NM_138340 ABHD3 1 0.29 0.31 17 3.7 78.59 23 4.8 No 10 0.42 No 0 0 No -22 0.82 Yes 48 79.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 19283639 - NM_138340 ABHD3 1 0.21 0.19 10 7.01 80.85 25 5.47 No 43 0.47 No 26 0.7 Yes -24 0.8 Yes 46 87.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23069008 + NM_022060 ABHD4 1 0.47 0.17 10 6.46 83.06 20 6 Yes 7 1.57 Yes 23 0.75 Yes -19 0.56 No 47 64.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 23074692 + NM_022060 ABHD4 1 1.97 1.49 49 6.84 80.8 27 6.49 Yes 41 1.46 Yes 26 0.94 Yes -26 0.96 Yes 44 95.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 43743403 + NM_016006 ABHD5 1 0.92 0.36 19 8.7 89.3 27 4.81 No 14 1.58 Yes 26 0.8 Yes -26 0.51 No 44 50.33 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 43759257 + NM_016006 ABHD5 1 2.57 1.22 45 3.98 77.97 22 6.32 Yes -3 1.1 Yes 22 0.4 Yes -21 0.43 No 48 47.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 58244129 + NM_020676 ABHD6 1 0.98 0.21 13 3.87 71.6 31 5.37 No 37 0.58 No 34 0.78 Yes -30 0.62 No 36 62.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 58279312 + NM_020676 ABHD6 1 15.27 3.19 62 4.63 85.6 24 5.1 No 25 1.09 Yes 26 0.68 Yes -23 0.83 Yes 47 89.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 27044671 - NM_001178116 ABI1 1 4.02 3.1 64 6.07 79.78 76 12.76 Yes 63 2.53 Yes 30 0.69 Yes -26 0.56 No 31 69.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 27044671 - NM_001178116 ABI1 1 0.31 0.21 12 6.07 79.78 76 12.76 Yes 63 2.53 Yes 30 0.69 Yes -26 0.56 No 31 69.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 27076164 - NM_001178116 ABI1 1 0.1 0.25 16 6.82 80.66 34 5.52 No 4 0.14 No 0 0 No -27 0.49 No 45 66.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 204240654 + NM_001282927 ABI2 1 8.19 0.43 23 12.09 92.28 26 5.57 Yes 13 0.7 No 0 0 No -25 0.86 Yes 45 81.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 204244934 + NM_001282927 ABI2 1 3.62 0.19 11 1.32 0 21 5.67 Yes 51 0.29 No 20 0.54 Yes -40 0.69 Yes 30 89.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 204245202 + NM_001282927 ABI2 1 0.15 0.11 7 10.26 84.34 28 5.55 No 15 0.78 Yes 0 0 No -27 0.8 Yes 43 88.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 204247965 + NM_001282927 ABI2 1 2.05 1.53 51 8.31 74.52 36 6.13 Yes 23 0.79 Yes 28 0.38 Yes -35 0.7 Yes 35 85.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 204247969 + NM_001282927 ABI2 1 0.62 0.49 29 0.11 0 40 6.45 Yes 27 0.79 Yes 28 0.38 Yes -39 0.7 Yes 31 81.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 204254736 + NM_001282927 ABI2 1 0.19 0.15 8 -1.03 0 21 4.58 No 8 0.99 Yes 0 0 No -20 0.8 Yes 38 67.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 204260381 + NM_001282927 ABI2 1 0.45 0.26 18 4.08 89.74 31 8.11 Yes 45 1.43 Yes 27 0.91 Yes -30 0.94 Yes 40 95.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 204260381 + NM_001282927 ABI2 1 7.2 4.17 72 4.08 89.74 31 8.11 Yes 45 1.43 Yes 27 0.91 Yes -30 0.94 Yes 40 95.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 204268039 + NM_001282927 ABI2 1 0.26 0.13 9 8.21 89.51 25 6.65 Yes 12 0.6 No 27 0.82 Yes -24 0.42 No 43 45.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 204272606 + NM_001282927 ABI2 1 1.26 0.58 23 7.86 87.29 23 5.83 Yes 28 0.2 No 0 0 No -22 0.85 Yes 48 73.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 204276007 + NM_001282927 ABI2 1 102.1 46.25 72 8.72 92.4 29 9.02 Yes 33 1.89 Yes 28 0.84 Yes -28 0.61 No 42 79.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 204281636 + NM_001282927 ABI2 1 2.88 1.24 52 3.76 0 9 3.87 No 6 1.34 Yes 0 0 No -24 0.77 Yes 46 78.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 47293870 + NM_016428 ABI3 1 0.06 0.13 8 2.87 72.6 23 4.8 No NA NA NA 24 0.86 Yes -22 0.51 No 48 19.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 47295042 + NM_016428 ABI3 1 0.34 0.43 22 11.74 85.99 18 5.56 Yes 5 -0.43 No 0 0 No -29 0.51 No 46 59.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 47296405 + NM_016428 ABI3 1 0.09 0.15 11 6.43 85.11 25 5.1 No 12 1.15 Yes 0 0 No -24 0.74 Yes 46 85.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 47296878 + NM_016428 ABI3 1 0.45 0.75 40 -2.32 53.85 15 5.48 No 2 0.77 Yes 25 0.83 Yes -27 0.38 No 56 34.6 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 47297533 + NM_016428 ABI3 1 2.74 3.19 64 4.22 76.16 25 6.71 Yes 69 -5.9 No 0 0 No -25 0.64 No 46 81.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 47297602 + NM_016428 ABI3 1 0.39 0.4 27 6.26 79.08 13 4.99 No 62 -1.08 No 0 0 No -24 0.53 No 52 62.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 47299431 + NM_016428 ABI3 1 2.38 2.21 58 6.83 78.09 28 5.48 No 35 -2.9 No 27 0.86 Yes -27 0.8 Yes 43 70.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 133726780 + NM_005157 ABL1 1 0.86 0.21 12 6.59 87.84 22 4.89 No 64 0.42 No 0 0 No -22 0.68 Yes 49 62.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 133729453 + NM_005157 ABL1 1 1.87 0.38 22 4.01 76.32 64 9 Yes 51 2.14 Yes 37 0.09 Yes -40 0.4 No 19 52.53 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 133750326 + NM_005157 ABL1 1 0.25 0.19 12 3.42 82.89 17 4.33 No 14 -1.4 No 0 0 No -26 0.78 Yes 44 61.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 133755104 + NM_005157 ABL1 1 0.15 0.15 10 4.77 93.02 22 4.17 No 74 1.41 Yes 0 0 No -21 0.91 Yes 49 93.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179079981 - NM_001168239 ABL2 1 0.69 0.13 9 6.04 75.22 38 6.5 Yes -3 0.17 No 28 0.69 Yes -23 0.67 Yes 47 74.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 179089406 - NM_001168239 ABL2 1 1.69 0.32 17 1.62 0 54 5.74 Yes 10 1.37 Yes 0 0 No -22 0.91 Yes 48 72.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 116207768 - NM_002313 ABLIM1 1 0.36 0.13 8 -0.15 0 21 4.58 No 18 1.51 Yes 0 0 No -41 0.66 Yes 29 72.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 116207786 - NM_002313 ABLIM1 1 6.17 1.32 44 6.48 77.26 24 4.04 No 0 1.52 Yes 23 0.9 Yes -23 0.73 Yes 47 88.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 116209895 - NM_002313 ABLIM1 1 0.88 0.22 11 -5.34 65.12 102 10.81 Yes -3 0.93 Yes 24 0.9 Yes -24 0.25 No 24 50.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 1005268 - NM_021962 ABR 1 0.7 0.39 21 8.99 92.49 29 6.85 Yes 4 0.26 No 0 0 No -28 0.9 Yes 42 96.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 909361 - NM_021962 ABR 1 2.85 2.47 62 11.49 88.66 31 5.56 Yes NA NA NA 24 0.8 Yes -24 0.43 No 46 76.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 914439 - NM_021962 ABR 1 0.17 0.19 12 3.94 78.11 23 5.1 No 17 -2.01 No 0 0 No -29 0.46 No 48 46.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 914902 - NM_021962 ABR 1 1.65 1.79 56 10.77 89.21 37 7.68 Yes 24 1.42 Yes 22 0.56 Yes -36 0.32 No 34 72.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 915798 - NM_021962 ABR 1 0.83 0.68 38 5.51 70.04 30 5.73 Yes 17 0.77 No 29 0.92 Yes -29 0.89 Yes 41 84.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 936696 - NM_021962 ABR 1 0.09 0.14 9 9.27 85.53 26 5.29 No 46 -2.26 No 0 0 No -25 0.86 Yes 45 77.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 948891 - NM_021962 ABR 1 0.25 0.35 17 5.92 85.9 24 6.48 Yes 11 1.33 Yes 0 0 No -23 0.82 Yes 47 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 962237 - NM_021962 ABR 1 0.13 0.11 7 4.68 73.26 30 5.66 Yes 17 1.5 Yes 0 0 No -29 0.91 Yes 41 97.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 998739 - NM_021962 ABR 1 0.32 0.44 27 7.07 84.76 15 5.31 No 2 1 Yes 0 0 No -24 0.95 Yes 46 96.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 999384 - NM_021962 ABR 1 0.08 0.11 7 5.81 83.93 44 9.33 Yes 31 -0.3 No 0 0 No -21 0.65 No 27 67.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 139354885 + NM_021243 ABRACL 1 0.68 2.54 15 9.61 92.3 34 5.02 No 5 0.99 Yes 0 0 No -33 0.88 Yes 37 94.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 139355295 + NM_021243 ABRACL 1 2.16 10.14 72 4.41 0 33 4.46 No 23 0.38 No 0 0 No -28 0.47 No 42 74.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 139361667 + NM_021243 ABRACL 1 0.02 0.13 8 5.53 73.81 42 6.6 Yes 69 -3.53 No 0 0 No -26 0.74 Yes 38 64.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 139362679 + NM_021243 ABRACL 1 0.16 1.31 29 8.81 90.97 119 11.26 Yes NA NA NA 0 0 No -26 0.39 No 44 46.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 127395155 + NR_033429 ABTB1 1 1 0.18 12 2.45 74.82 16 5.1 No 3 1.23 Yes 0 0 No -15 0.5 No 49 72.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 34181923 - NM_145804 ABTB2 1 0.26 0.11 7 -5.16 0 10 2.86 No 34 1.84 Yes 26 0.98 Yes -46 0.63 No 24 36.21 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 38168116 - NR_024024 ACAA1 1 0.43 0.71 33 -1.66 64.69 39 6.58 Yes 26 -2.1 No 0 0 No -24 0.42 No 27 38.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 38173130 - NR_024024 ACAA1 1 634.24 71.79 72 8.39 96.26 18 4.51 No 8 -0.69 No 20 0.46 Yes -20 0.95 Yes 50 92.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 38176044 - NR_024024 ACAA1 1 1.04 0.68 31 7.94 94.25 29 5.44 No 57 -2.85 No 28 0.82 Yes -28 0.83 Yes 42 80.08 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 38178146 - NR_024024 ACAA1 1 0.21 0.1 7 4.73 84.23 19 4.69 No 44 0.37 No 25 0.73 Yes -18 0.51 No 52 69.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 47311698 - NM_006111 ACAA2 1 0.46 0.64 31 4.1 87.27 18 3.68 No 26 1.25 Yes 0 0 No -21 0.54 No 49 49.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 47314012 - NM_006111 ACAA2 1 0.09 0.11 8 11.82 87.72 31 4.99 No 34 1.64 Yes 0 0 No -24 0.59 No 35 53.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 47328928 - NM_006111 ACAA2 1 0.25 0.29 21 4.74 84.41 27 5.57 Yes 57 0.58 No 0 0 No -24 0.42 No 44 77.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 35562793 - NM_198838 ACACA 1 1.85 0.63 32 -7.41 76.55 28 5.55 No 3 1.06 Yes 21 0.58 Yes -27 0.73 Yes 43 81.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 35564668 - NM_198838 ACACA 1 0.9 0.38 19 0.82 66.68 57 7.44 Yes 61 0.47 No 0 0 No -25 0.56 No 17 59.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 35622419 - NM_198838 ACACA 1 0.54 0.24 15 4.74 78.25 15 5.1 No 2 0.83 Yes 0 0 No -22 0.14 No 53 45.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 35625149 - NM_198838 ACACA 1 0.36 0.19 9 8.67 91.87 29 3.98 No 1 0.68 No 0 0 No -29 0.88 Yes 41 89.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 35631582 - NM_198838 ACACA 1 0.37 0.24 15 6.37 84.69 24 4.88 No 11 0.67 No 0 0 No -26 0.3 No 44 68.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112124154 + NM_025247 ACAD10 1 0.4 0.1 7 10.61 84.39 41 6.48 Yes 28 1.51 Yes 28 0.64 Yes -40 0.68 Yes 30 73.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112128255 + NM_025247 ACAD10 1 0.73 0.14 8 7.36 85.52 30 5.66 Yes 56 0.48 No 29 0.83 Yes -29 0.93 Yes 41 90.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112136121 + NM_025247 ACAD10 1 0.51 0.11 7 11.78 95.65 34 6.6 Yes 69 0.98 Yes 0 0 No -28 0.95 Yes 42 95.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112143588 + NM_025247 ACAD10 1 2.57 0.76 34 6.73 79.87 22 7.07 Yes 69 1.06 Yes 0 0 No -21 0.89 Yes 49 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112146074 + NM_025247 ACAD10 1 0.8 0.21 14 9.11 88.73 31 5.25 No 74 -3.77 No 0 0 No -24 0.86 Yes 46 83.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112147261 + NM_025247 ACAD10 1 0.89 0.25 14 4.63 71.29 34 5.37 No 21 1.07 Yes 0 0 No -33 0.62 No 37 85.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112148076 + NM_025247 ACAD10 1 65.5 10.65 72 6.53 86.16 20 7.14 Yes 7 1.27 Yes 19 0.76 Yes -19 0.75 Yes 51 84.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112148078 + NM_025247 ACAD10 1 0.84 0.13 8 -3.91 83.21 22 7.28 Yes 9 1.26 Yes 0 0 No -21 0.86 Yes 49 84.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112148082 + NM_025247 ACAD10 1 1.25 0.19 11 -5.74 0 14 3.38 No 13 1.25 Yes 0 0 No -25 0.82 Yes 45 86.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112168576 + NM_025247 ACAD10 1 1.61 0.22 14 10.67 88.27 41 5.8 Yes 28 1.03 Yes 0 0 No -34 0.43 No 36 52.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112183993 + NM_025247 ACAD10 1 4.6 0.75 36 7.8 79.79 31 6 Yes 54 1.75 Yes 0 0 No -30 0.76 Yes 40 80.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112185391 + NM_025247 ACAD10 1 1.94 0.61 31 0.66 80.51 19 4.8 No 71 -5.03 No 18 0.91 Yes -18 0.88 Yes 52 89.13 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112186814 + NM_025247 ACAD10 1 13.57 2.39 61 10.31 89.31 23 5.57 Yes 10 1.02 Yes 22 0.7 Yes -26 0.39 No 44 47.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 112194015 + NM_025247 ACAD10 1 3.26 0.44 24 5.52 76.1 15 5 No 6 -1.97 No 0 0 No -24 0.56 No 46 40.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112194439 + NM_025247 ACAD10 1 8.44 1.07 45 10.17 85.9 22 6.09 Yes 9 0.91 Yes 0 0 No -21 0.71 Yes 49 74.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 132297901 - NR_132428 ACAD11 1 23.96 3.31 67 10.21 92.85 32 7.27 Yes 19 0.61 No 31 0.79 Yes -27 0.78 Yes 39 80.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 134126229 + NM_014384 ACAD8 1 0.32 0.11 7 10.33 84.59 13 5.2 No 37 -2.36 No 0 0 No -21 0.64 No 49 79.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 134129922 + NM_014384 ACAD8 1 2.45 1.07 43 7.99 88.05 42 7.54 Yes 29 2.61 Yes 41 0.76 Yes -41 0.86 Yes 29 91.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 134131500 + NM_014384 ACAD8 1 0.32 0.15 9 6.4 82.82 15 4.16 No 2 0.43 No 24 0.93 Yes -24 0.92 Yes 46 90.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 134132025 + NM_014384 ACAD8 1 4.05 1.96 59 8.59 80.6 24 6.07 Yes 11 0.46 No 23 0.9 Yes -31 0.58 No 39 61.34 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 134132663 + NM_014384 ACAD8 1 4.11 2.21 65 10.83 82.02 29 5.92 Yes 33 0.07 No 22 0.67 Yes -22 0.66 No 42 65.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 134133014 + NM_014384 ACAD8 1 0.47 0.25 16 4.04 79.21 32 6.1 Yes 64 0.66 No 0 0 No -24 0.37 No 51 49.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 134133229 + NM_014384 ACAD8 1 1.74 0.93 42 9.29 81.42 27 7.66 Yes 14 0.41 No 0 0 No -27 0.63 No 44 68.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 128603499 + NM_014049 ACAD9 1 0.44 0.35 18 -4.8 0 16 5.7 Yes 54 0.99 Yes 22 0.55 Yes -26 0.52 No 44 45.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 128603517 + NM_014049 ACAD9 1 0.78 0.61 31 5.37 89.67 25 4.9 No 72 1 Yes 24 0.78 Yes -22 0.5 No 40 47.27 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 128617273 + NM_014049 ACAD9 1 0.39 0.32 19 3.99 0 27 6.73 Yes 40 1.16 Yes 26 0.76 Yes -26 0.41 No 37 39.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 128618004 + NM_014049 ACAD9 1 1.68 1.36 50 6.61 84.94 43 6.68 Yes 30 1.36 Yes 0 0 No -21 0.73 Yes 45 68.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 128627790 + NM_014049 ACAD9 1 0.09 0.1 7 -10.08 0 18 4.08 No 11 -0.84 No 23 0.94 Yes -17 0.41 No 56 36.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 128628761 + NM_014049 ACAD9 1 0.22 0.21 14 4.24 80.66 17 5.8 Yes 4 1.5 Yes 0 0 No -20 0.54 No 50 65.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 128629233 + NM_014049 ACAD9 1 0.66 0.65 30 5.53 77.14 23 4.9 No 10 1.09 Yes 0 0 No -22 0.88 Yes 48 86.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 76192510 + NM_001127328 ACADM 1 6.66 0.49 23 3.97 84.41 28 6.78 Yes 15 1.05 Yes 0 0 No -27 0.93 Yes 43 94.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 76194085 + NM_001127328 ACADM 1 6818.78 465.38 72 6.55 0 20 3.56 No 26 0.33 No 22 0.84 Yes -19 0.71 Yes 51 67.86 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 76198330 + NM_001127328 ACADM 1 0.07 0.53 26 -6.02 79.06 28 5.24 No 51 1.26 Yes 0 0 No -27 0.89 Yes 43 90.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 76198522 + NM_001127328 ACADM 1 0.14 1.42 49 2.21 78.09 36 5.2 No 39 -2.91 No 30 0.44 Yes -38 0.59 No 32 52.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 76198735 + NM_001127328 ACADM 1 0.01 0.1 7 9.43 85.78 28 7.81 Yes 15 1.26 Yes 27 0.7 Yes -27 0.48 No 43 66.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 76213661 + NM_001127328 ACADM 1 0.04 0.29 16 6.98 86.13 24 5.38 No 33 -2.9 No 0 0 No -23 0.35 No 46 28.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 76214256 + NM_001127328 ACADM 1 0.04 0.28 15 3.96 80.32 27 4.29 No 74 -5.42 No 0 0 No -27 0.35 No 43 34.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 76216454 + NM_001127328 ACADM 1 0.28 2.07 43 3.66 84.41 34 8.42 Yes 21 1.12 Yes 33 0.93 Yes -33 0.62 No 37 77.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 76217702 + NM_001127328 ACADM 1 0.02 0.18 11 4.19 0 38 6.93 Yes 25 1.22 Yes 0 0 No -37 0.55 No 33 69.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 76220617 + NM_001127328 ACADM 1 0.09 0.64 31 8.2 84.03 21 6.63 Yes 8 1.37 Yes 20 0.75 Yes -20 0.9 Yes 50 91.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 76226935 + NM_001127328 ACADM 1 0.06 0.44 24 3.09 79.76 42 6.31 Yes 5 0.13 No 0 0 No -20 0.43 No 50 62.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7124209 + NM_001270448 ACADVL 1 0.06 0.18 11 -8.11 0 11 3.57 No 38 0.8 Yes 28 0.29 Yes -50 0.49 No 60 58.76 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 7124246 + NM_001270448 ACADVL 1 0.06 0.19 9 -0.6 0 43 6.53 Yes 75 0.82 Yes 23 0.68 Yes -42 0.54 No 28 72.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 7124804 + NM_001270448 ACADVL 1 0.09 0.19 13 6.4 79.13 17 5.67 Yes 57 -2.48 No 18 0.75 Yes -27 0.69 Yes 54 51.58 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 7125255 + NM_001270448 ACADVL 1 0.03 0.11 7 -5.64 55.73 23 5.1 No 7 -2.24 No 22 0.96 Yes -22 0.89 Yes 48 39.72 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 7125910 + NM_001270448 ACADVL 1 0.08 0.15 8 0.46 67.91 38 6.08 Yes 25 0.73 No 0 0 No -37 0.73 Yes 41 54.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7126455 + NM_001270448 ACADVL 1 0.2 0.29 15 1.58 0 37 6.08 Yes 24 0.2 No 0 0 No -30 0.45 No 40 45.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7127134 + NM_001270448 ACADVL 1 0.06 0.18 12 -7.05 82.07 23 5.91 Yes 10 1.17 Yes 19 0.77 Yes -22 0.9 Yes 48 82.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7127138 + NM_001270448 ACADVL 1 0.05 0.15 8 -8.36 0 10 4 No 14 1.18 Yes 19 0.77 Yes -26 0.87 Yes 44 85.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7127802 + NM_001270448 ACADVL 1 4.19 10.85 72 -1.28 0 32 6.16 Yes 19 0.91 Yes 27 0.91 Yes -31 0.88 Yes 39 89.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7127955 + NM_001270448 ACADVL 1 0.36 0.64 31 1.39 0 34 6.78 Yes 21 2.03 Yes 29 0.93 Yes -33 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 7127968 + NM_001270448 ACADVL 1 0.1 0.18 12 -6.48 0 18 4.12 No 34 2 Yes 24 0.52 Yes -46 0.82 Yes 24 81.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7127980 + NM_001270448 ACADVL 1 0.26 0.46 26 4.79 0 18 4.58 No 46 1.99 Yes 24 0.52 Yes -58 0.35 No 12 58.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 7128098 + NM_001270448 ACADVL 1 0.05 0.11 7 -4.74 0 12 4.24 No 50 -4.43 No 25 0.82 Yes -39 0.39 No 59 27.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7240529 + NM_014716 ACAP1 1 0.21 0.25 14 5.92 84.04 19 4.57 No -2 0.2 No 0 0 No -18 0.25 No 52 44.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7240581 + NM_014716 ACAP1 1 1.35 1.6 56 -1.81 0 62 7.81 Yes 50 0.7 No 24 0.32 Yes -35 0.72 Yes 16 67.13 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 7243215 + NM_014716 ACAP1 1 0.3 0.49 31 10.27 92.16 37 7.69 Yes 31 2 Yes 0 0 No -36 0.63 No 34 74.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7243215 + NM_014716 ACAP1 1 0.11 0.19 12 10.27 92.16 37 7.69 Yes 31 2 Yes 0 0 No -36 0.63 No 34 74.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7247151 + NM_014716 ACAP1 1 0.19 0.38 20 -1.42 80.92 10 4.65 No 67 -1.97 No 30 0.89 Yes -25 0.32 No 45 30.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7248553 + NM_014716 ACAP1 1 0.2 0.39 18 12.2 87.53 18 5.11 No 10 1.45 Yes 0 0 No -22 0.77 Yes 48 66.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7249673 + NM_014716 ACAP1 1 1.46 2.78 61 6.57 85.33 16 4.69 No 3 0.98 Yes 18 0.57 Yes -15 0.52 No 55 69.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 7251162 + NM_014716 ACAP1 1 0.46 0.47 21 4.09 82.09 21 4.69 No 60 -0.16 No 0 0 No -20 0.6 No 50 52.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7251481 + NM_014716 ACAP1 1 0.33 0.5 27 4.01 75.63 34 5.7 Yes 68 2.2 Yes 0 0 No -26 0.83 Yes 44 71.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 194999698 - NM_012287 ACAP2 1 0.65 0.88 41 6.71 84.84 29 8.15 Yes 16 0.9 Yes 0 0 No -28 0.79 Yes 38 81.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195004112 - NM_012287 ACAP2 1 0.26 0.35 21 7.81 86.1 13 4.89 No 0 1.26 Yes 0 0 No -29 0.86 Yes 41 91.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195006093 - NM_012287 ACAP2 1 0.17 0.26 16 9.48 98.88 29 6.21 Yes 16 0.35 No 0 0 No -29 0.5 No 42 76.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 195007406 - NM_012287 ACAP2 1 0.07 0.11 7 2.26 71.31 37 6.16 Yes 52 0.44 No 0 0 No -21 0.34 No 49 50.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 195013179 - NM_012287 ACAP2 1 0.18 0.24 15 2.77 82.18 27 6.41 Yes 69 0.87 Yes 0 0 No -30 0.54 No 40 63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 195016030 - NM_012287 ACAP2 1 3.87 5.03 70 5.26 79.03 68 8.83 Yes 55 2.15 Yes 39 0.62 Yes -39 0.9 Yes 31 81.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 195016618 - NM_012287 ACAP2 1 0.13 0.19 13 3.43 0 24 6.27 Yes 11 0.85 Yes 0 0 No -26 0.67 Yes 44 66.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 195022873 - NM_012287 ACAP2 1 0.15 0.18 9 8.28 88.13 22 4.91 No 36 0.79 Yes 27 0.26 Yes -24 0.61 No 46 63.29 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 195022901 - NM_012287 ACAP2 1 0.23 0.29 14 1.21 73.14 21 5.5 No 8 0.82 Yes 0 0 No -21 0.27 No 50 35.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 195027345 - NM_012287 ACAP2 1 0.07 0.11 7 -9.28 0 29 5.85 Yes 29 -1.7 No 0 0 No -28 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 195033370 - NM_012287 ACAP2 1 0.21 0.19 12 2.82 77.6 42 6.94 Yes 29 0.84 Yes 0 0 No -41 0.48 No 33 68.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 195033697 - NM_012287 ACAP2 1 0.54 0.46 25 6.36 88.23 80 5.82 Yes 23 0.96 Yes 0 0 No -35 0.56 No 43 67.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 195063375 - NM_012287 ACAP2 1 0.07 0.11 7 -7.73 0 12 4 No 14 1.16 Yes 20 0.45 Yes -30 0.85 Yes 40 85.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 195063382 - NM_012287 ACAP2 1 0.3 0.44 27 -2.52 83.2 20 4.78 No 7 1.2 Yes 20 0.45 Yes -23 0.87 Yes 47 89.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 195063399 - NM_012287 ACAP2 1 0.28 0.4 26 -5.52 0 15 3.1 No 27 0.93 Yes 21 0.92 Yes -15 0.24 No 53 27.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 195070209 - NM_012287 ACAP2 1 0.64 1.24 47 11.65 94.53 30 7.21 Yes 40 0.57 No 0 0 No -30 0.56 No 40 46.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 195078514 - NM_012287 ACAP2 1 0.67 1.24 45 10.98 85.95 19 5.62 Yes 6 0.76 No 23 0.56 Yes -23 0.69 Yes 47 70.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 195086295 - NM_012287 ACAP2 1 2.68 4.93 68 10.19 88.27 28 5.22 No 8 0.85 Yes 0 0 No -21 0.71 Yes 49 72.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195088469 - NM_012287 ACAP2 1 0.09 0.17 12 7.72 82.29 44 6.56 Yes 58 1.29 Yes 0 0 No -19 0.67 Yes 51 59.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 195112872 - NM_012287 ACAP2 1 1.11 0.94 42 2.1 0 32 7.83 Yes 19 1.2 Yes 0 0 No -27 0.57 No 43 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 195131739 - NM_012287 ACAP2 1 0.45 0.36 19 7.49 89.69 22 5.35 No 9 0.53 No 28 0.61 Yes -28 0.68 Yes 42 84.84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 195133646 - NM_012287 ACAP2 1 1.11 0.9 37 7.96 80.36 21 8.62 Yes 8 1.49 Yes 0 0 No -20 0.6 No 50 75.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 195162850 - NM_012287 ACAP2 1 0.19 0.14 9 6.64 78.21 27 6.4 Yes 14 1.5 Yes 26 0.87 Yes -26 0.76 Yes 44 92.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1229292 - NM_030649 ACAP3 1 1.12 0.28 16 3.44 74.38 25 5.2 No 12 0.91 Yes 0 0 No -24 0.96 Yes 46 89.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1229310 - NM_030649 ACAP3 1 0.37 0.1 7 1.83 0 158 8.57 Yes NA NA NA 0 0 No -31 0.76 Yes 39 30.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 1230222 - NM_030649 ACAP3 1 1.28 0.33 18 10.01 84.66 9 5.39 No NA NA NA 27 0.88 Yes -22 0.61 No 44 74.15 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 1231315 - NM_030649 ACAP3 1 1.49 0.53 28 3.33 0 24 6 Yes 11 1.31 Yes 0 0 No -23 0.94 Yes 47 93.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1235407 - NM_030649 ACAP3 1 0.76 0.22 14 3.61 91.27 21 4.46 No 49 1.25 Yes 0 0 No -20 0.43 No 50 53.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1235643 - NM_030649 ACAP3 1 1.06 0.39 22 3.78 76.11 19 5 No 68 -5.44 No 0 0 No -23 0.76 Yes 47 57.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 1236198 - NM_030649 ACAP3 1 0.52 0.17 10 0.5 80.22 23 5 No 58 -4.02 No 0 0 No -22 0.4 No 48 37.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1236283 - NM_030649 ACAP3 1 0.44 0.15 11 0.94 74.68 31 6.04 Yes 60 1.1 Yes 0 0 No -30 0.39 No 54 29.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1236311 - NM_030649 ACAP3 1 2.63 0.94 37 0.77 54.25 41 6.28 Yes 32 1.1 Yes 0 0 No -19 0.26 No 36 18.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 107998612 + NM_000019 ACAT1 1 1.16 1.68 57 1.63 62.92 21 5.01 No 76 0.48 No 24 0.8 Yes -24 0.79 Yes 46 71.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 108004550 + NM_000019 ACAT1 1 0.03 0.1 7 -3 0 80 6.96 Yes 18 0.5 No 0 0 No -33 0.42 No 37 77.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108009640 + NM_000019 ACAT1 1 0.09 0.17 11 0.72 76.06 11 5 No 34 0.67 No 0 0 No -46 0.91 Yes 24 95.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108006796 + NM_000019 ACAT1 1 0.06 0.13 9 0.01 78.95 25 6.13 Yes 12 1.76 Yes 24 0.93 Yes -24 0.53 No 46 80.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 108010796 + NM_000019 ACAT1 1 0.07 0.22 14 2.7 0 34 6.67 Yes 21 0.51 No 0 0 No -33 0.78 Yes 37 91.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 160188099 + NM_001303253 ACAT2 1 0.04 0.15 11 6.34 84.67 13 5.48 No 31 -1.92 No 0 0 No -23 0.66 No 47 64.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 160196174 + NM_001303253 ACAT2 1 0.19 0.81 38 -1.12 53.1 14 4.81 No 72 -4.99 No 29 0.56 Yes -13 0.43 No 45 38.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 160198354 + NM_001303253 ACAT2 1 0.26 0.83 36 3.25 74.88 17 4.36 No 20 0.92 Yes 0 0 No -25 0.8 Yes 45 49.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 226340309 - NM_022735 ACBD3 1 0.57 1.03 43 3.63 0 15 4.58 No 17 0.73 No 0 0 No -38 0.77 Yes 41 73.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226344482 - NM_022735 ACBD3 1 0.17 0.25 13 9.63 87.23 18 5.73 Yes 5 1.95 Yes 0 0 No -26 0.81 Yes 44 82.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 226347084 - NM_022735 ACBD3 1 0.24 0.49 27 -7.49 0 16 4.24 No 36 0.08 No 26 0.34 Yes -46 0.34 No 22 62.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 226355993 - NM_022735 ACBD3 1 0.25 0.24 14 12.91 89.77 26 6.86 Yes 63 -2.5 No 0 0 No -25 0.76 Yes 45 73.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 43215088 + NM_024722 ACBD4 1 199.8 13.01 72 11.79 82.71 29 5.92 Yes 33 0.81 Yes 23 0.66 Yes -23 0.62 No 47 77.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 43215258 + NM_024722 ACBD4 1 4.01 0.63 34 5.99 78.09 59 7.71 Yes 46 1.2 Yes 23 0.83 Yes -25 0.42 No 24 67.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 43215276 + NM_024722 ACBD4 1 8.69 1.35 53 3.08 77.7 12 3.89 No 8 1.23 Yes 23 0.83 Yes -20 0.72 Yes 50 84.15 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 43215289 + NM_024722 ACBD4 1 0.83 0.14 7 -5.44 0 16 4.36 No 21 1.2 Yes 23 0.83 Yes -33 0.62 No 50 41.69 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 43215642 + NM_024722 ACBD4 1 0.87 0.14 9 8.66 83.41 18 4.66 No 32 -1.03 No 22 0.91 Yes -22 0.79 Yes 48 73.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 43219943 + NM_024722 ACBD4 1 1.62 0.19 10 4.74 84.41 27 6.08 Yes 14 1.53 Yes 32 0.5 Yes -26 0.75 Yes 44 79.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 43219949 + NM_024722 ACBD4 1 10.94 1.07 44 -0.09 0 9 3.87 No 20 1.52 Yes 32 0.5 Yes -32 0.74 Yes 38 81.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 27494206 - NM_001271512 ACBD5 1 0.14 0.13 8 8.23 86.79 27 6.12 Yes 11 0.88 Yes 24 0.86 Yes -23 0.79 Yes 47 70.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 27512169 - NM_001271512 ACBD5 1 61.08 24.36 72 4.05 79.13 43 9.43 Yes 15 1.45 Yes 27 0.89 Yes -42 0.75 Yes 28 87.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 27523418 - NM_001271512 ACBD5 1 0.14 0.11 7 10.15 89.4 36 6.16 Yes 23 0.8 Yes 0 0 No -35 0.68 Yes 35 93.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180272920 - NM_032360 ACBD6 1 0.36 0.5 26 8.85 88.97 32 7.23 Yes 19 1.13 Yes 0 0 No -31 0.87 Yes 39 84.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180281458 - NM_032360 ACBD6 1 0.14 0.21 13 2.89 71.76 41 6.99 Yes 17 0.02 No 0 0 No -30 0.34 No 41 23.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 180295698 - NM_032360 ACBD6 1 0.4 0.79 36 8.02 77.32 26 5.57 Yes 52 0.41 No 25 0.71 Yes -25 0.63 No 44 55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 180366736 - NM_032360 ACBD6 1 0.15 0.28 15 3.44 0 35 6.63 Yes 22 0.39 No 0 0 No -26 0.64 No 36 61.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 180370916 - NM_032360 ACBD6 1 0.8 1.69 54 9.23 92.75 29 8.36 Yes 16 1.59 Yes 0 0 No -28 0.95 Yes 42 96.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180375554 - NM_032360 ACBD6 1 0.07 0.15 10 4.87 85.96 23 4.57 No 63 0.27 No 0 0 No -22 0.94 Yes 48 93.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 180387059 - NM_032360 ACBD6 1 0.44 0.51 27 11.12 92.54 28 5.57 Yes 43 0.59 No 0 0 No -27 0.76 Yes 43 60.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 180465896 - NM_032360 ACBD6 1 0.13 0.17 11 8.11 84.95 32 7.38 Yes 19 1.3 Yes 0 0 No -31 0.89 Yes 39 90.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180469961 - NM_032360 ACBD6 1 0.89 1.11 43 10.8 95.65 30 6.85 Yes 17 1.98 Yes 0 0 No -29 0.95 Yes 41 96.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67691575 - NM_001082487 ACD 1 0.19 0.14 7 6.79 82.65 16 4.69 No 26 1.03 Yes 0 0 No -38 0.66 No 38 70.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 67691605 - NM_001082487 ACD 1 0.18 0.14 9 5.63 80.58 20 3.5 No -4 0.99 Yes 25 0.9 Yes -25 0.55 No 45 58.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 67691932 - NM_001082487 ACD 1 0.51 0.43 21 7.34 87.47 23 5.39 No 65 -1.46 No 23 0.71 Yes -23 0.74 Yes 47 82.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67691932 - NM_001082487 ACD 1 0.14 0.13 7 7.34 87.47 23 5.39 No 65 -1.46 No 23 0.71 Yes -23 0.74 Yes 47 82.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67692736 - NM_001082487 ACD 1 1.4 1.15 49 6.2 80.67 19 5.3 No 6 0.54 No 24 0.67 Yes -18 0.59 No 52 61.42 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67693692 - NM_001082487 ACD 1 0.25 0.11 7 -20.55 0 11 4 No 31 -1.15 No 0 0 No -26 0.87 Yes 44 75.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19411427 + NM_001010887 ACER2 1 0.29 0.13 7 7.53 87.63 18 5.2 No 2 0.39 No 0 0 No -22 0.64 No 48 64.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19424366 + NM_001010887 ACER2 1 3.6 0.78 29 11.49 91.95 52 6.56 Yes 32 1.13 Yes 0 0 No -20 0.58 No 45 60.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 19428189 + NM_001010887 ACER2 1 0.84 0.35 18 3.41 0 28 6.34 Yes 15 0.3 No 0 0 No -27 0.93 Yes 43 81.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19432043 + NM_001010887 ACER2 1 0.34 0.15 7 9.94 94.18 19 3.76 No 66 -4.1 No 0 0 No -23 0.48 No 43 53.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19432790 + NM_001010887 ACER2 1 0.79 0.31 18 8.75 92 20 7 Yes 50 -2.8 No 0 0 No -26 0.59 No 44 52.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19446181 + NM_001010887 ACER2 1 7.33 3.21 54 4.99 79.04 19 5 No 29 1.24 Yes 26 0.4 Yes -18 0.64 No 52 80.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 19446539 + NM_001010887 ACER2 1 1.36 0.28 16 11.31 91.47 22 6.52 Yes 44 -0.94 No 0 0 No -40 0.73 Yes 30 83.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19450285 + NM_001010887 ACER2 1 0.88 0.32 16 7.75 91.46 26 5.55 No 13 0.79 Yes 0 0 No -25 0.62 No 45 84.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 76692840 + NM_001300953 ACER3 1 0.66 0.15 9 3.11 71.27 48 6.88 Yes 75 -2.36 No 0 0 No -26 0.47 No 23 55.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 76705199 + NM_001300953 ACER3 1 1.02 0.13 8 5.63 87.56 27 6.38 Yes 68 1.02 Yes 26 0.69 Yes -26 0.75 Yes 44 75.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 76708249 + NM_001300953 ACER3 1 2.45 0.35 21 10.85 84.24 24 6.42 Yes 11 1.21 Yes 0 0 No -29 0.54 No 41 86.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 76722373 + NM_001300953 ACER3 1 2.68 0.49 24 9.1 88.9 28 5.38 No 54 2.15 Yes 27 0.73 Yes -27 0.77 Yes 43 84.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23531714 - NM_001164815 ACIN1 1 0.18 0.5 29 9.25 86.71 28 5.29 No 28 1.04 Yes 0 0 No -27 0.92 Yes 43 91.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23531714 - NM_001164815 ACIN1 1 0.05 0.14 8 9.25 86.71 28 5.29 No 28 1.04 Yes 0 0 No -27 0.92 Yes 43 91.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23532247 - NM_001164815 ACIN1 1 0.28 0.82 40 1.65 65.01 18 5.82 Yes 5 1.05 Yes 0 0 No -17 0.67 Yes 52 73.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23532275 - NM_001164815 ACIN1 1 0.18 0.54 33 -2.11 0 14 4.24 No 69 -1.53 No 0 0 No -38 0.34 No 29 44.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 23532697 - NM_001164815 ACIN1 1 0.21 0.61 30 9.44 88.74 27 5.39 No 14 0.44 No 0 0 No -26 0.81 Yes 44 48.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 23533386 - NM_001164815 ACIN1 1 0.19 0.49 28 1.72 75.49 21 6.24 Yes 8 1.38 Yes 0 0 No -26 0.68 Yes 50 71.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23533431 - NM_001164815 ACIN1 1 27.05 66.6 72 2.35 72.87 31 6.51 Yes 51 0.67 No 30 0.81 Yes -30 0.81 Yes 40 86.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23533695 - NM_001164815 ACIN1 1 22.59 51.63 72 -2.84 66.76 31 6.84 Yes 18 1.27 Yes 27 0.95 Yes -30 0.92 Yes 40 88.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23536361 - NM_001164815 ACIN1 1 0.06 0.14 8 5.09 76.07 90 9.56 Yes 37 1.37 Yes 0 0 No -36 0.65 No 34 75.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 23537260 - NM_001164815 ACIN1 1 0.05 0.13 8 1.82 71.56 43 6.78 Yes 63 0.91 Yes 0 0 No -42 0.95 Yes 28 98.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23537674 - NM_001164815 ACIN1 1 0.77 1.78 54 6.95 86.4 39 8.49 Yes 26 1.13 Yes 38 0.62 Yes -38 0.83 Yes 32 88.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23537881 - NM_001164815 ACIN1 1 0.87 2.13 61 -0.1 63.73 39 5.11 No 26 -1.25 No 35 0.57 Yes -33 0.76 Yes 32 66.83 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 23537911 - NM_001164815 ACIN1 1 0.8 1.99 62 3.48 81.86 27 5.2 No -4 -1.63 No 26 0.8 Yes -26 0.9 Yes 44 48.92 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 23538230 - NM_001164815 ACIN1 1 0.33 0.79 35 7.8 83.44 31 6.08 Yes 18 0.78 Yes 0 0 No -30 0.77 Yes 40 93.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23538321 - NM_001164815 ACIN1 1 0.13 0.32 18 6.86 75.16 23 5.39 No 18 2.05 Yes 0 0 No -30 0.5 No 40 80.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 23545758 - NM_001164815 ACIN1 1 0.36 0.63 36 4.52 80.58 33 5.07 No 70 0.47 No 30 0.26 Yes -22 0.55 No 40 56.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 23545761 - NM_001164815 ACIN1 1 0.1 0.18 9 6.12 82.13 30 4.84 No 67 0.47 No 30 0.26 Yes -30 0.57 No 43 60.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 40030252 - NM_198830 ACLY 1 0.08 0.22 11 5.33 74.7 27 6.08 Yes 37 -2.61 No 38 0.6 Yes -22 0.59 No 48 54.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 40048222 - NM_198830 ACLY 1 0.05 0.25 12 5.22 73.49 21 5.56 Yes 8 1.25 Yes 0 0 No -16 0.63 No 50 53.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40052903 - NM_198830 ACLY 1 509.89 322.56 72 9.04 91.75 32 5.45 No 15 0.33 No 27 0.86 Yes -27 0.87 Yes 43 73.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40058091 - NM_198830 ACLY 1 0.04 0.14 8 6.4 78.6 24 8.99 Yes 11 1.01 Yes 22 0.78 Yes -23 0.78 Yes 47 70.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40061892 - NM_198830 ACLY 1 0.04 0.11 7 4.99 74.96 19 5.38 No 27 1.97 Yes 0 0 No -39 0.73 Yes 31 51.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 40063823 - NM_198830 ACLY 1 1.27 5.19 72 1.93 67.15 29 6.17 Yes 16 1.31 Yes 0 0 No -28 0.93 Yes 42 95.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40066850 - NM_198830 ACLY 1 0.1 0.36 22 4.59 70.35 52 5.23 No 23 1.13 Yes 0 0 No -35 0.66 No 35 84.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 40067660 - NM_198830 ACLY 1 0.35 1.31 49 11.28 94.43 27 6.67 Yes 9 0.27 No 0 0 No -26 0.39 No 40 29.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40070154 - NM_198830 ACLY 1 56.21 118.31 72 6.96 88.17 20 4.8 No 7 2.13 Yes 19 0.95 Yes -19 0.92 Yes 51 96.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 32386368 + NM_002197 ACO1 1 2.68 0.38 21 10.77 89.84 26 5.1 No 13 1.54 Yes 25 0.88 Yes -25 0.93 Yes 45 92.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 32399539 + NM_002197 ACO1 1 1.22 0.22 12 8.94 82.85 18 7.01 Yes 5 0.92 Yes 0 0 No -33 0.62 No 37 63.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41865351 + NM_001098 ACO2 1 0.26 0.9 39 8.93 77.19 64 9.19 Yes NA NA NA 0 0 No -21 0.66 No 46 66.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 41873916 + NM_001098 ACO2 1 0.12 0.4 22 3.28 69.26 27 6.01 Yes 14 0.44 No 0 0 No -26 0.64 No 44 67.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 41895549 + NM_001098 ACO2 1 0.33 1.17 46 7.46 93.18 29 6.39 Yes 44 0.73 No 0 0 No -29 0.71 Yes 41 77.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 41898633 + NM_001098 ACO2 1 0.18 0.93 40 11.34 85.48 45 6.86 Yes 76 0.75 No 0 0 No -40 0.44 No 26 76.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 41903449 + NM_001098 ACO2 1 0.12 0.6 26 5.41 81.71 38 6.04 Yes 48 1.27 Yes 0 0 No -37 0.75 Yes 33 72.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41913300 + NM_001098 ACO2 1 0.19 0.79 31 5.21 85.08 27 3.85 No 21 1.08 Yes 26 0.93 Yes -26 0.93 Yes 44 96.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 41913600 + NM_001098 ACO2 1 0.03 0.1 7 8.17 83.36 30 5.91 Yes -2 -0.23 No 0 0 No -28 0.5 No 44 39.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 41913946 + NM_001098 ACO2 1 0.15 0.71 39 10.31 88 43 7.62 Yes 30 1.34 Yes 0 0 No -42 0.67 Yes 28 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41917302 + NM_001098 ACO2 1 1.3 5.89 69 5.72 84.06 44 6.83 Yes 12 1.03 Yes 24 0.83 Yes -24 0.77 Yes 46 66.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 41920192 + NM_001098 ACO2 1 0.04 0.18 11 6.44 74.18 37 6.14 Yes 1 1.29 Yes 0 0 No -36 0.83 Yes 34 76.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74040989 + NM_006821 ACOT2 1 2.19 1.24 48 4.74 84.41 33 5.7 Yes 20 0.09 No 20 0.84 Yes -26 0.61 No 44 69.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 6366943 - NM_181864 ACOT7 1 0.06 0.13 9 9.55 95.16 26 6.24 Yes 38 0.89 Yes 25 0.47 Yes -25 0.57 No 45 59.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 6392415 - NM_181864 ACOT7 1 0.09 0.22 13 6.1 71.66 37 6.4 Yes 24 1.11 Yes 0 0 No -36 0.61 No 34 88.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 44472038 - NM_005469 ACOT8 1 0.65 0.28 14 10.37 91.56 23 5.83 Yes 44 1.37 Yes 29 0.81 Yes -29 0.69 Yes 41 80.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 44472412 - NM_005469 ACOT8 1 4.67 3.42 67 10.16 88.13 13 5.92 Yes NA NA NA 28 0.44 Yes -33 0.85 Yes 37 79.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 44482619 - NM_005469 ACOT8 1 2.69 1.82 57 0.19 0 37 9.05 Yes 24 2.06 Yes 31 0.94 Yes -36 0.95 Yes 34 91.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 44482624 - NM_005469 ACOT8 1 6.2 4.11 71 9.49 84.88 32 8.77 Yes 19 2.09 Yes 31 0.94 Yes -31 0.96 Yes 39 93.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 23726641 - NM_001033583 ACOT9 1 0.12 0.17 9 3.41 0 50 7.14 Yes 37 0.77 Yes 0 0 No -49 0.71 Yes 26 63.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 23726641 - NM_001033583 ACOT9 1 0.38 0.43 23 3.41 0 50 7.14 Yes 37 0.77 Yes 0 0 No -49 0.71 Yes 26 63.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 23748549 - NM_001033583 ACOT9 1 0.14 0.25 12 7.57 81.58 37 6 Yes 24 0.94 Yes 0 0 No -31 0.74 Yes 39 75.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 23752485 - NM_001033583 ACOT9 1 440.55 63.4 72 7.33 82 26 6.98 Yes 13 1.59 Yes 25 0.87 Yes -25 0.83 Yes 45 90.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 23752485 - NM_001033583 ACOT9 1 1.86 0.25 17 7.33 82 26 6.98 Yes 13 1.59 Yes 25 0.87 Yes -25 0.83 Yes 45 90.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73939295 - NM_004035 ACOX1 1 0.19 0.29 18 4.74 84.41 24 7.42 Yes 11 1.09 Yes 23 0.81 Yes -23 0.8 Yes 47 81.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73942901 - NM_004035 ACOX1 1 0.13 0.19 11 -0.78 79.29 25 6.62 Yes 12 0.13 No 32 0.54 Yes -24 0.65 No 46 57.08 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 73942904 - NM_004035 ACOX1 1 0.09 0.13 8 0.85 66.27 22 6.39 Yes 9 0.11 No 32 0.54 Yes -21 0.62 No 44 50.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 73964684 - NM_004035 ACOX1 1 0.1 0.11 8 11.89 100 32 7.86 Yes 19 0.96 Yes 0 0 No -32 0.58 No 38 59.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73969867 - NM_004035 ACOX1 1 8.27 8.92 72 11.78 82.32 27 5.74 Yes 14 0.95 Yes 26 0.82 Yes -26 0.84 Yes 44 84.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73972965 - NM_004035 ACOX1 1 0.15 0.17 12 11.92 90.76 29 6.26 Yes 16 0.78 Yes 0 0 No -28 0.92 Yes 42 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 8368610 - NM_003501 ACOX3 1 2.89 0.82 34 6.66 85.37 32 5.91 Yes 3 0.62 No 0 0 No -31 0.83 Yes 39 89.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 8376240 - NM_003501 ACOX3 1 3.63 0.71 30 10.34 93.08 42 6.47 Yes 29 1.15 Yes 0 0 No -27 0.85 Yes 43 86.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 8390100 - NM_003501 ACOX3 1 1.39 0.49 26 6.76 84.25 36 8.03 Yes 71 1.26 Yes 0 0 No -28 0.64 No 35 78.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 8394177 - NM_003501 ACOX3 1 1.1 0.5 27 -1.18 0 48 7.25 Yes 57 1.43 Yes 0 0 No -35 0.68 Yes 23 78.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 8410877 - NM_003501 ACOX3 1 0.26 0.15 8 10.11 91.48 52 6.27 Yes 5 1.57 Yes 0 0 No -39 0.75 Yes 31 78.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 8431400 - NM_003501 ACOX3 1 2.38 0.28 15 4.99 73.43 30 6 Yes 28 2.27 Yes 0 0 No -29 0.63 No 41 65.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 8433171 - NM_003501 ACOX3 1 9.93 1.03 41 6.82 84.08 27 5.2 No 18 1.4 Yes 0 0 No -26 0.96 Yes 44 96.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 8433860 - NM_003501 ACOX3 1 2.13 0.24 16 6.79 73.75 35 8.77 Yes 76 0.22 No 0 0 No -34 0.64 No 36 71.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 269300 + NM_004300 ACP1 1 0.07 0.22 11 8.78 85.84 31 6.55 Yes 18 1.31 Yes 30 0.87 Yes -30 0.86 Yes 40 94.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 271892 + NM_004300 ACP1 1 0.07 0.22 14 5.67 79.9 25 5.56 Yes 48 2.29 Yes 0 0 No -24 0.57 No 46 68.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47261435 - NM_001302490 ACP2 1 0.54 0.18 12 10.41 91.57 39 5.36 No 48 0.96 Yes 0 0 No -38 0.75 Yes 32 62.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 47261718 - NM_001302490 ACP2 1 4.18 1.69 53 8.08 87.61 22 5.41 No 9 1.84 Yes 0 0 No -21 0.86 Yes 49 68.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 47261750 - NM_001302490 ACP2 1 2.58 1.08 40 9.66 76.92 47 7.46 Yes 72 2 Yes 0 0 No -29 0.9 Yes 41 73.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47263622 - NM_001302490 ACP2 1 0.51 0.18 9 7.89 92.81 29 5.32 No 71 1.6 Yes 0 0 No -28 0.71 Yes 42 78.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47266503 - NM_001302490 ACP2 1 3.08 1.42 49 7.07 79.64 44 7.07 Yes -2 0.7 No 0 0 No -43 0.79 Yes 27 87.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 47266974 - NM_001302490 ACP2 1 0.34 0.18 12 3.39 0 27 6.16 Yes 14 1.13 Yes 21 0.95 Yes -26 0.95 Yes 44 86.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11687656 - NM_001111036 ACP5 1 0.27 0.21 11 -10.65 68.89 37 4.65 No 29 1.52 Yes 0 0 No -29 0.44 No 41 40.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 11689473 - NM_001111036 ACP5 1 65.29 8.35 72 7.62 81.84 34 5.07 No 21 0.49 No 29 0.5 Yes -33 0.59 No 37 67.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 11689580 - NM_001111036 ACP5 1 8.32 1.08 37 8.13 90.46 33 7.84 Yes 20 1.14 Yes 32 0.83 Yes -32 0.62 No 38 72.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 147124451 - NM_001323625 ACP6 1 7.44 0.81 36 11.18 92.16 22 5.29 No 28 0.68 No 21 0.79 Yes -21 0.8 Yes 49 86.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89183397 + NM_001284316 ACSF3 1 3.2 1.22 46 5.88 78.1 31 5.11 No 18 0.99 Yes 0 0 No -30 0.84 Yes 40 77.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89183400 + NM_001284316 ACSF3 1 3.28 1.21 48 6.26 83.13 34 5.32 No 21 0.97 Yes 0 0 No -33 0.7 Yes 50 76.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89188781 + NM_001284316 ACSF3 1 0.22 0.11 7 10.39 81.48 55 8.85 Yes 42 0.39 No 24 0.7 Yes -24 0.75 Yes 46 79.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89200222 + NM_001284316 ACSF3 1 0.52 0.22 11 8.65 85.8 24 5.29 No 63 0.43 No 0 0 No -20 0.44 No 48 67.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89206325 + NM_001284316 ACSF3 1 1.49 0.57 26 7.89 93.04 23 6.97 Yes 10 1.66 Yes 0 0 No -22 0.4 No 42 48.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 89206343 + NM_001284316 ACSF3 1 0.54 0.26 13 9.95 85.72 27 5.19 No 28 1.66 Yes 0 0 No -26 0.87 Yes 44 85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89207474 + NM_001284316 ACSF3 1 2.96 1.29 40 5.67 83.78 25 5.25 No 3 0.92 Yes 24 0.77 Yes -25 0.64 No 45 74.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 89211621 + NM_001284316 ACSF3 1 5.96 2.6 60 4.01 88.81 22 4.79 No 62 1.2 Yes 21 0.91 Yes -21 0.92 Yes 49 94.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89213438 + NM_001284316 ACSF3 1 1.08 0.43 24 7.72 86.22 21 5.97 Yes 48 1.06 Yes 0 0 No -20 0.74 Yes 50 74.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89217435 + NM_001284316 ACSF3 1 1.97 0.85 36 -0.87 0 13 4 No 67 -3.7 No 19 0.45 Yes -40 0.93 Yes 30 51.79 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 89218199 + NM_001284316 ACSF3 1 2.02 0.82 42 5.02 80.12 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.66 Yes 51 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185677510 - NM_001286710 ACSL1 1 0.06 0.15 10 10.19 91.34 26 6.24 Yes 13 1.56 Yes 0 0 No -25 0.88 Yes 45 93.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185679047 - NM_001286710 ACSL1 1 0.19 0.42 22 4.17 72.35 32 6.07 Yes 37 1.41 Yes 0 0 No -19 0.56 No 51 62.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 185680215 - NM_001286710 ACSL1 1 0.24 0.5 26 8.66 92.48 22 4.94 No 1 0.5 No 0 0 No -21 0.59 No 49 60.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 185683648 - NM_001286710 ACSL1 1 0.66 1.1 46 5.83 78.72 22 5.08 No 37 1.49 Yes 21 0.88 Yes -49 0.58 No 21 66.93 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 185691631 - NM_001286710 ACSL1 1 3049.79 223.4 72 7.55 91.38 36 6.42 Yes 23 1.15 Yes 35 0.65 Yes -36 0.72 Yes 34 73.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 185696570 - NM_001286710 ACSL1 1 0.09 0.15 10 12.54 85.96 33 6.61 Yes 72 1.49 Yes 0 0 No -27 0.56 No 43 50.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 185697721 - NM_001286710 ACSL1 1 0.09 0.11 7 1.48 66.72 23 4.89 No 32 -3.78 No 0 0 No -22 0.89 Yes 48 82.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 185709668 - NM_001286710 ACSL1 1 0.1 0.18 12 10.46 83.34 38 6.63 Yes 43 -1.51 No 29 0.66 Yes -29 0.55 No 41 72.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 223782787 + NM_004457 ACSL3 1 1.2 1.36 47 5.78 75.76 20 5.1 No 36 0.96 Yes 0 0 No -26 0.46 No 44 45.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 223806218 + NM_004457 ACSL3 1 0.59 0.82 36 -4.41 0 44 5.93 Yes 39 0.73 No 0 0 No -44 0.77 Yes 26 81.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 108908502 - NM_004458 ACSL4 1 0.04 0.1 7 8.81 89.61 51 8.04 Yes 72 0.96 Yes 0 0 No -28 0.39 No 20 60.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 108911487 - NM_004458 ACSL4 1 0.06 0.17 10 2.57 72.93 19 4.61 No 30 0.59 No 0 0 No -42 0.45 No 28 45.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 108926511 - NM_004458 ACSL4 1 0.22 0.13 8 2.52 70.7 20 5.23 No 55 -2.02 No 0 0 No -19 0.45 No 51 46.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 108926605 - NM_004458 ACSL4 1 217.13 107.72 72 -1.28 63.64 37 6.13 Yes 75 1.9 Yes 30 0.64 Yes -30 0.74 Yes 34 82.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 108926605 - NM_004458 ACSL4 1 22.6 11.36 72 -1.28 63.64 37 6.13 Yes 75 1.9 Yes 30 0.64 Yes -30 0.74 Yes 34 82.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 108926648 - NM_004458 ACSL4 1 2.88 1.51 53 1.42 65.7 45 6.14 Yes 32 1.9 Yes 30 0.64 Yes -44 0.77 Yes 26 69.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 108926782 - NM_004458 ACSL4 1 1.01 0.47 26 6.6 86.16 30 8.09 Yes 69 1.77 Yes 29 0.94 Yes -29 0.97 Yes 41 96.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 108926782 - NM_004458 ACSL4 1 0.7 0.36 20 6.6 86.16 30 8.09 Yes 69 1.77 Yes 29 0.94 Yes -29 0.97 Yes 41 96.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 108926896 - NM_004458 ACSL4 1 2.17 1.07 47 8.49 86.4 79 10.85 Yes 66 1.79 Yes 42 0.46 Yes -42 0.34 No 28 42.75 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 108926896 - NM_004458 ACSL4 1 3.54 1.83 46 8.49 86.4 79 10.85 Yes 66 1.79 Yes 42 0.46 Yes -42 0.34 No 28 42.75 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 108934361 - NM_004458 ACSL4 1 4.17 2.14 57 6.68 82.9 33 6.49 Yes 20 0.33 No 0 0 No -32 0.76 Yes 38 85.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 108971044 - NM_004458 ACSL4 1 0.1 0.13 8 0.04 65.4 41 7.78 Yes 28 0.78 Yes 0 0 No -40 0.81 Yes 30 66.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 108976207 - NM_004458 ACSL4 1 0.19 0.25 14 2.91 0 33 5.92 Yes 53 -0.41 No 0 0 No -28 0.51 No 42 85.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 108976211 - NM_004458 ACSL4 1 1.02 1.28 39 -4.15 80.89 29 5.57 Yes 49 -0.4 No 0 0 No -24 0.54 No 46 87.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 114141724 + NM_016234 ACSL5 1 0.1 0.17 9 6.14 82.22 22 5.66 Yes 68 1.15 Yes 0 0 No -21 0.68 Yes 49 56.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 114163090 + NM_016234 ACSL5 1 0.16 0.33 17 5.72 90.92 22 5.23 No 9 1 Yes 0 0 No -21 0.72 Yes 49 72.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 114170015 + NM_016234 ACSL5 1 0.24 0.39 22 6.6 83.73 24 5.99 Yes 70 -4.51 No 23 0.84 Yes -23 0.49 No 47 51.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 24994704 - NM_001252676 ACSS1 1 2.09 1.58 55 -1.25 0 14 3.61 No 22 0.42 No 0 0 No -30 0.67 Yes 40 76.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 25002155 - NM_001252676 ACSS1 1 0.18 0.11 8 3.37 79.8 9 5.2 No 29 1.93 Yes 0 0 No -41 0.72 Yes 29 67.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 25010881 - NM_001252676 ACSS1 1 0.65 0.24 13 4.32 77.38 27 6.48 Yes 14 1.48 Yes 0 0 No -26 0.64 No 44 67.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 90706811 - NM_001320855 ACTA2 1 0.68 1.14 39 7.7 85.1 22 4.93 No 66 1.16 Yes 0 0 No -21 0.8 Yes 49 67.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 90744712 - NM_001320855 ACTA2 1 2.36 0.33 19 9.78 82.54 42 8.31 Yes 29 0.91 Yes 0 0 No -26 0.88 Yes 44 88.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5567520 - NM_001101 ACTB 1 0 0.44 27 -12.08 0 29 6.61 Yes 16 1.75 Yes 0 0 No -28 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 5567555 - NM_001101 ACTB 1 0 0.96 42 1.49 82.63 9 4.69 No 48 -2.88 No 25 0.95 Yes -55 0.7 Yes 62 32.93 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 5567816 - NM_001101 ACTB 1 0 0.64 39 -1.85 0 27 5.5 No 53 1.15 Yes 0 0 No -26 0.87 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 5568303 - NM_001101 ACTB 1 0.01 3.71 65 4.05 83.84 30 5.26 No 60 0.66 No 0 0 No -27 0.46 No 48 59.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 5568951 - NM_001101 ACTB 1 0 0.24 16 -0.46 72.9 24 5.1 No -3 0.87 Yes 0 0 No -24 0.59 No 61 29.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 5569316 - NM_001101 ACTB 1 0.01 3.5 60 3.91 76.5 15 5.73 Yes 39 -3.02 No 25 0.97 Yes -51 0.25 No 37 14.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 5569347 - NM_001101 ACTB 1 0 0.21 12 -5.89 54.37 21 5.2 No 72 1.14 Yes 0 0 No -20 0.36 No 50 18.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 5569365 - NM_001101 ACTB 1 0.09 26.85 72 1.93 66.73 67 9.35 Yes 54 1.15 Yes 37 0.1 Yes -48 0.51 No 34 7.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79477857 - NR_037688 ACTG1 1 0 0.43 23 -15.64 0 29 5.81 Yes 16 0.14 No 0 0 No -28 0.42 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79478134 - NR_037688 ACTG1 1 0 0.15 11 -7.15 0 23 5 No 51 0.67 No 0 0 No -22 0.8 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 79478605 - NR_037688 ACTG1 1 0 0.17 12 4.37 77.29 46 5.12 No 63 1.65 Yes 30 0.61 Yes -30 0.63 No 52 47.05 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79478830 - NR_037688 ACTG1 1 0.01 1.71 51 9.99 93.4 30 5.38 No 17 1.34 Yes 29 0.87 Yes -29 0.76 Yes 41 81.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79479088 - NR_037688 ACTG1 1 0.01 0.44 28 -0.1 72.64 24 4.83 No -3 1.32 Yes 0 0 No -24 0.63 No 47 35.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 79479142 - NR_037688 ACTG1 1 0.01 0.75 41 -4.84 61.39 22 6 Yes 33 1.61 Yes 21 0.74 Yes -45 0.65 No 30 28.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79479145 - NR_037688 ACTG1 1 0.01 0.49 22 -3.94 62.28 19 5.74 Yes 30 1.62 Yes 21 0.74 Yes -42 0.67 Yes 28 26.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 179287870 + NM_178042 ACTL6A 1 0.1 0.15 7 5.98 84.9 21 5 No 14 1.08 Yes 0 0 No -20 0.87 Yes 50 88.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179292168 + NM_178042 ACTL6A 1 0.06 0.21 14 -3.89 0 15 4.47 No 29 1.52 Yes 0 0 No -45 0.43 No 25 47.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 179293190 + NM_178042 ACTL6A 1 0.11 0.22 12 9.39 92.98 18 4.9 No 5 1.29 Yes 23 0.64 Yes -23 0.7 Yes 53 75.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 179294592 + NM_178042 ACTL6A 1 0.05 0.11 7 -0.67 68.31 17 4.37 No 33 0.75 No 25 0.94 Yes -24 0.45 No 25 26.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 69352317 - NM_001130004 ACTN1 1 0.89 0.56 24 -0.72 0 27 5.44 No 0 0.52 No 0 0 No -27 0.63 No 58 58.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69367664 - NM_001130004 ACTN1 1 0.35 0.1 7 12.31 88.65 129 9.91 Yes 12 1.27 Yes 24 0.9 Yes -24 0.9 Yes 46 92.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39195575 + NM_004924 ACTN4 1 0.02 0.1 7 -0.59 67.79 40 7.5 Yes 39 1.53 Yes 0 0 No -39 0.92 Yes 31 91.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39196685 + NM_004924 ACTN4 1 0.03 0.22 13 -2.78 74.36 25 6.14 Yes 12 1.73 Yes 0 0 No -24 0.97 Yes 46 97.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39201915 + NM_004924 ACTN4 1 2.9 13.58 72 13.12 88.16 45 9.11 Yes 32 1.57 Yes 44 0.68 Yes -44 0.8 Yes 26 85.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39210926 + NM_004924 ACTN4 1 0.03 0.17 12 7.9 82.15 31 7.22 Yes 47 0.53 No 0 0 No -30 0.59 No 40 49.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39215076 + NM_004924 ACTN4 1 0.08 0.32 22 -0.53 0 9 3.87 No 24 2.41 Yes 0 0 No -36 0.71 Yes 34 55.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 39218955 + NM_004924 ACTN4 1 0.5 2.06 61 3.96 73.76 180 13.02 Yes NA NA NA 21 0.22 Yes -21 0.6 No 49 72.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 39218955 + NM_004924 ACTN4 1 0.08 0.32 19 3.96 73.76 180 13.02 Yes NA NA NA 21 0.22 Yes -21 0.6 No 49 72.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 58680354 + NM_018477 ACTR10 1 0.15 0.17 11 -8.55 0 16 3.58 No 6 1 Yes 29 0.65 Yes -10 0.24 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 58686417 + NM_018477 ACTR10 1 0.45 0.44 28 -0.63 0 9 3.87 No 13 0.75 No 0 0 No -31 0.33 No 45 48.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 58690318 + NM_018477 ACTR10 1 0.81 0.89 40 -4.19 0 16 4.23 No 38 0.19 No 26 0.55 Yes -15 0.57 No 55 23.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 58697795 + NM_018477 ACTR10 1 0.1 0.13 8 -7.71 0 39 6.61 Yes 70 0.96 Yes 31 0.61 Yes -29 0.49 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 104240747 - NM_005736 ACTR1A 1 0.05 0.14 8 8.6 83.21 18 4.13 No 71 -2.85 No 30 0.88 Yes -21 0.4 No 45 34.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 104240928 - NM_005736 ACTR1A 1 0.03 0.1 7 -12.55 0 30 6 Yes 17 0.73 No 0 0 No -29 0.95 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104241677 - NM_005736 ACTR1A 1 0.39 0.99 42 -0.34 64.37 16 4.69 No -4 0.3 No 29 0.79 Yes -41 0.5 No 18 27.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 104243785 - NM_005736 ACTR1A 1 0.08 0.24 14 5.24 88.14 19 5 No 6 0.49 No 0 0 No -18 0.75 Yes 52 87.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 104248030 - NM_005736 ACTR1A 1 0.31 0.9 40 -8.19 77.6 25 5.57 Yes 24 1.31 Yes 22 0.56 Yes -24 0.81 Yes 46 70.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 104248906 - NM_005736 ACTR1A 1 0.05 0.13 8 -1.04 0 17 8.1 Yes 4 0.74 No 26 0.62 Yes -23 0.42 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 98273457 - NM_005735 ACTR1B 1 0.26 0.24 14 6.06 84.59 26 5.29 No 20 0.05 No 29 0.71 Yes -22 0.66 Yes 48 35.89 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 98275096 - NM_005735 ACTR1B 1 0.18 0.15 8 -3.78 0 16 4.47 No 11 0.52 No 0 0 No -15 0.66 No 47 29.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98276825 - NM_005735 ACTR1B 1 0.29 0.4 21 9.16 79.78 20 5.57 Yes 7 0.88 Yes 0 0 No -19 0.89 Yes 51 86.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 98277286 - NM_005735 ACTR1B 1 0.23 0.29 14 7.84 79.55 26 5.06 No 26 2.27 Yes 0 0 No -25 0.9 Yes 45 88.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 65466986 + NM_001005386 ACTR2 1 0.02 0.15 11 -9.36 0 32 7.28 Yes 19 2.65 Yes 0 0 No -31 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 65478133 + NM_001005386 ACTR2 1 0.01 0.13 7 3.83 77.49 47 6.8 Yes 34 0.71 No 35 0.4 Yes -24 0.87 Yes 46 77.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 65495698 + NM_001005386 ACTR2 1 0.02 0.28 16 -6.82 0 25 6.62 Yes 9 0.14 No 0 0 No -24 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 114673578 + NM_001277140 ACTR3 1 0.03 0.5 25 9.1 85.9 37 6.34 Yes 71 -3.43 No 0 0 No -22 0.52 No 48 59.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 114674474 + NM_001277140 ACTR3 1 0.01 0.14 9 0.51 76.07 24 4.42 No 15 1.66 Yes 0 0 No -23 0.87 Yes 47 58.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 114681838 + NM_001277140 ACTR3 1 0.02 0.38 23 8.29 88.27 27 7.49 Yes 14 0.74 No 0 0 No -26 0.94 Yes 44 96.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 114686302 + NM_001277140 ACTR3 1 0.03 0.53 24 9.41 83.56 25 7.19 Yes 12 0.6 No 0 0 No -28 0.72 Yes 42 65.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 114686740 + NM_001277140 ACTR3 1 0.03 0.67 30 7.66 83.64 53 8.61 Yes 64 1.48 Yes 0 0 No -40 0.67 Yes 30 74.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 114686744 + NM_001277140 ACTR3 1 0.01 0.13 8 2.61 0 57 8.77 Yes 68 1.47 Yes 0 0 No -44 0.65 No 26 75.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 114691734 + NM_001277140 ACTR3 1 0.17 2.99 62 11.65 92.32 25 7.32 Yes 68 0.87 Yes 0 0 No -24 0.82 Yes 46 80.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 114698416 + NM_001277140 ACTR3 1 0.03 0.57 29 9.29 88.27 21 9.63 Yes 25 0.9 Yes 0 0 No -30 0.4 No 40 69.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 114699737 + NM_001277140 ACTR3 1 0.01 0.13 9 -10.42 0 15 4.1 No 70 0.66 No 23 0.74 Yes -46 0.61 No 24 53.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 114709037 + NM_001277140 ACTR3 1 0.01 0.14 9 0.43 0 19 5.37 No 35 1.33 Yes 25 0.33 Yes -18 0.41 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 114709056 + NM_001277140 ACTR3 1 0.02 0.29 16 -11.66 0 33 6.69 Yes 54 1.34 Yes 0 0 No -26 0.38 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152508781 + NR_073000 ACTR3B 1 2.97 1.28 50 8.1 82.82 31 4.52 No 39 0.7 No 25 0.62 Yes -31 0.33 No 40 44.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 152513569 + NR_073000 ACTR3B 1 0.43 0.18 9 4.65 0 20 6 Yes 7 0.61 No 25 0.74 Yes -29 0.84 Yes 41 85.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 152517387 + NR_073000 ACTR3B 1 1.42 0.33 18 3.72 0 37 6.24 Yes 24 2.06 Yes 0 0 No -36 0.91 Yes 34 96.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152523159 + NR_073000 ACTR3B 1 0.59 0.11 8 4.44 81.15 20 4.38 No 3 1.55 Yes 0 0 No -28 0.65 No 42 58.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152539568 + NR_073000 ACTR3B 1 14.77 3.32 61 9.04 92.27 32 6.3 Yes -2 0.51 No 0 0 No -31 0.94 Yes 39 95.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 149945902 - NM_001164459 ACTR3C 1 17.04 0.78 32 7.86 84.91 26 4.73 No 1 0.76 No 0 0 No -25 0.74 Yes 45 81.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 149961964 - NM_001164459 ACTR3C 1 0.65 0.11 8 7.11 87.38 37 5.49 No 37 1.07 Yes 0 0 No -36 0.67 Yes 34 77.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 149964000 - NM_001164459 ACTR3C 1 1.49 0.22 12 7.33 77.1 26 5.48 No 13 0.6 No 0 0 No -25 0.95 Yes 45 96.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 149964385 - NM_001164459 ACTR3C 1 1.83 0.26 16 9.04 92.27 32 6.3 Yes -2 0.51 No 0 0 No -31 0.94 Yes 39 95.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 149980890 - NM_001164459 ACTR3C 1 1.08 0.21 11 4.44 81.15 20 4.38 No 3 1.55 Yes 0 0 No -28 0.65 No 42 58.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 149986679 - NM_001164459 ACTR3C 1 6.64 1.17 47 3.72 0 37 6.24 Yes 24 2.06 Yes 0 0 No -36 0.91 Yes 34 96.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 149990505 - NM_001164459 ACTR3C 1 1.36 0.39 22 4.65 0 20 6 Yes 7 0.61 No 0 0 No -29 0.84 Yes 41 85.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 37378649 + NM_024855 ACTR5 1 3.26 0.82 35 6.26 78.87 26 6.88 Yes 13 1.16 Yes 28 0.86 Yes -25 0.85 Yes 45 80.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 37394899 + NM_024855 ACTR5 1 10.04 3.14 67 4.64 79.51 23 5.25 No 38 0.52 No 0 0 No -23 0.55 No 48 50.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 100602549 + NR_048568 ACTR6 1 0.15 0.13 8 -0.36 0 35 7.76 Yes 60 0.68 No 31 0.39 Yes -31 0.53 No 39 53.87 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 100603943 + NR_048568 ACTR6 1 0.53 0.56 24 4.21 74.27 28 5.66 Yes 15 0.41 No 0 0 No -27 0.84 Yes 43 86.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 100606037 + NR_048568 ACTR6 1 0.46 0.47 28 1.77 0 62 7.46 Yes 32 0.58 No 0 0 No -31 0.46 No 39 59.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 100609057 + NR_048568 ACTR6 1 0.14 0.1 7 5.51 85.55 24 4.76 No 55 -3.36 No 0 0 No -23 0.9 Yes 47 84.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 100613845 + NR_048568 ACTR6 1 1.45 1.19 43 4.71 92.23 26 5.2 No 13 0.41 No 25 0.93 Yes -25 0.94 Yes 45 96.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 53902917 - NM_022899 ACTR8 1 0.64 0.83 41 6.03 77.26 27 5.29 No 55 0.85 Yes 23 0.88 Yes -26 0.65 No 44 77.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 53904671 - NM_022899 ACTR8 1 0.19 0.24 14 9.67 94.39 26 5.35 No 13 0.01 No 0 0 No -26 0.58 No 45 49.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53907174 - NM_022899 ACTR8 1 2.15 2.71 65 5.8 78.01 29 5.01 No 0 0.32 No 28 0.81 Yes -26 0.58 No 42 70.88 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 53907174 - NM_022899 ACTR8 1 0.82 1.04 43 5.8 78.01 29 5.01 No 0 0.32 No 28 0.81 Yes -26 0.58 No 42 70.88 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 53908750 - NM_022899 ACTR8 1 0.1 0.14 10 11.86 88.27 45 8.45 Yes 32 1.19 Yes 0 0 No -44 0.76 Yes 26 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53911318 - NM_022899 ACTR8 1 0.29 0.36 16 8 80.36 28 5.48 No 15 0.27 No 0 0 No -27 0.96 Yes 43 96.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53914100 - NM_022899 ACTR8 1 1.13 1.24 46 5.93 83.76 25 4.04 No 50 0.39 No 25 0.65 Yes -19 0.57 No 51 65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 67410366 - NM_080658 ACY3 1 0.3 0.13 8 10.6 85.06 29 5.48 No NA NA NA 0 0 No -23 0.91 Yes 47 93.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 67412846 - NM_080658 ACY3 1 1.08 0.18 13 -0.52 0 9 3.87 No 15 2.49 Yes 0 0 No -27 0.91 Yes 43 90.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67414397 - NM_080658 ACY3 1 11.83 1.19 44 8.6 78.2 52 7.37 Yes 58 -0.63 No 21 0.55 Yes -21 0.34 No 49 53.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 75523264 - NR_126393 ACYP1 1 42.53 2.97 64 7.9 88.91 49 5.28 No 57 1.49 Yes 0 0 No -31 0.8 Yes 39 85.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75523264 - NR_126393 ACYP1 1 3.04 0.24 11 7.9 88.91 49 5.28 No 57 1.49 Yes 0 0 No -31 0.8 Yes 39 85.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 54365974 + NM_001320587 ACYP2 1 0.42 0.21 12 4.85 84.95 27 5.57 Yes 38 0.05 No 0 0 No -26 0.57 No 44 79.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 54373598 + NM_001320587 ACYP2 1 0.22 0.11 8 9.6 95.65 31 7.55 Yes 18 1.64 Yes 0 0 No -30 0.68 Yes 40 67.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 54374528 + NM_001320587 ACYP2 1 0.85 0.36 19 9.38 87.88 27 5.02 No 59 0.51 No 0 0 No -26 0.67 Yes 44 75.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 54394164 + NM_001320587 ACYP2 1 0.22 0.1 7 8.06 92.15 27 5.82 Yes 14 1.6 Yes 0 0 No -27 0.81 Yes 43 85.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 54450133 + NM_001320587 ACYP2 1 1.82 0.83 42 11.08 91.11 26 5.84 Yes 50 1.03 Yes 25 0.76 Yes -25 0.88 Yes 45 92.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 54500623 + NM_001320587 ACYP2 1 0.29 0.1 7 9.64 87.56 35 6.14 Yes 13 1.5 Yes 0 0 No -25 0.52 No 36 76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 43248492 - NM_000022 ADA 1 0.06 0.31 16 -11.28 57.86 28 6.56 Yes 15 1.58 Yes 30 0.88 Yes -27 0.63 No 31 60.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 43248494 - NM_000022 ADA 1 0.13 0.6 28 -5.56 0 26 6.4 Yes 13 1.6 Yes 30 0.88 Yes -25 0.61 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 43248587 - NM_000022 ADA 1 0.28 1.39 45 6.88 83.38 23 5.39 No NA NA NA 0 0 No -23 0.58 No 47 65.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 43249020 - NM_000022 ADA 1 0.03 0.1 7 1.08 55.49 18 4.95 No 67 1 Yes 0 0 No -51 0.56 No 19 74.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 43251789 - NM_000022 ADA 1 0.47 1.24 47 5.16 83.59 25 5.29 No 12 0.16 No 0 0 No -24 0.69 Yes 46 66.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 43253367 - NM_000022 ADA 1 0.06 0.14 7 2.65 0 14 4.47 No 58 1.08 Yes 0 0 No -19 0.84 Yes 51 85.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43257808 - NM_000022 ADA 1 0.56 1.57 48 -6.54 84.07 20 8.06 Yes 7 1.68 Yes 0 0 No -19 0.83 Yes 51 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43263491 - NM_000022 ADA 1 0.07 0.17 11 -1.98 73.98 20 6.66 Yes 53 0.84 Yes 0 0 No -26 0.25 No 40 41.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 43268888 - NM_000022 ADA 1 0.06 0.11 7 5.45 80.12 20 7.14 Yes 7 1.14 Yes 0 0 No -19 0.65 No 51 85.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 43276075 - NM_000022 ADA 1 0.13 0.26 15 10.47 87.44 23 5.29 No 66 -2.26 No 0 0 No -32 0.57 No 43 78.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 43279875 - NM_000022 ADA 1 0.07 0.14 9 -1.99 0 21 4.5 No 69 -5.5 No 0 0 No -20 0.5 No 56 45.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 43625468 + NM_001324366 ADAL 1 1.3 0.26 15 2.55 63.41 40 6.76 Yes 27 0.42 No 24 0.83 Yes -24 0.78 Yes 46 73.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 43631093 + NM_001324366 ADAL 1 1.3 0.51 33 10.55 93.21 22 5.03 No 52 0.76 No 0 0 No -21 0.89 Yes 49 82.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 43631574 + NM_001324366 ADAL 1 1.11 0.44 24 4.91 84.26 23 4.45 No 35 1.03 Yes 0 0 No -23 0.52 No 40 43.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43639217 + NM_001324366 ADAL 1 1.67 0.51 27 1 0 20 5.77 Yes 23 1.51 Yes 0 0 No -35 0.89 Yes 35 90.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43644026 + NM_001324366 ADAL 1 0.84 0.13 8 1.85 76.83 21 5.66 Yes 62 0.77 Yes 0 0 No -20 0.61 No 45 73.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 58889718 - NM_001110 ADAM10 1 0.84 1.94 61 7.86 79.51 30 5.57 Yes 17 2.14 Yes 29 0.92 Yes -29 0.75 Yes 41 87.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 58930057 - NM_001110 ADAM10 1 0.11 0.15 9 12 87.82 32 4.74 No 39 0.19 No 0 0 No -34 0.45 No 36 60.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 58942815 - NM_001110 ADAM10 1 0.24 0.38 21 9.76 93.71 32 6.86 Yes 19 0.4 No 0 0 No -31 0.69 Yes 39 78.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 58947590 - NM_001110 ADAM10 1 0.07 0.1 7 7.93 83.99 31 5.92 Yes 71 -1.9 No 0 0 No -26 0.56 No 44 58.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 58947616 - NM_001110 ADAM10 1 1.37 2.1 60 10.52 86.24 28 5.57 Yes 45 -1.92 No 27 0.64 Yes -27 0.82 Yes 43 74.32 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 58957424 - NM_001110 ADAM10 1 0.06 0.14 9 2.5 60.1 54 6.87 Yes 27 0.88 Yes 25 0.8 Yes -33 0.59 No 37 69.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 58969009 - NM_001110 ADAM10 1 0.12 0.26 14 -0.25 0 32 4.03 No 54 -1.21 No 0 0 No -24 0.56 No 46 55.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59041236 - NM_001110 ADAM10 1 1.68 1.49 59 7.52 83.48 17 5.37 No 4 1.84 Yes 25 0.95 Yes -25 0.96 Yes 45 93.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155028262 + NM_001261464 ADAM15 1 1.72 0.29 18 5.53 78.38 21 6.09 Yes 8 0.94 Yes 20 0.78 Yes -20 0.57 No 50 84.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 9639840 - NM_003183 ADAM17 1 0.26 0.14 8 2.98 68.25 65 8.77 Yes 52 0.7 No 0 0 No -25 0.53 No 45 66.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 9656713 - NM_003183 ADAM17 1 0.19 0.13 9 9.67 87.56 22 7.21 Yes 9 1.28 Yes 0 0 No -21 0.91 Yes 49 93.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 9658369 - NM_003183 ADAM17 1 0.42 0.18 11 -2.93 0 13 4.11 No 42 1.11 Yes 0 0 No -49 0.54 No 21 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 9661451 - NM_003183 ADAM17 1 7.91 6.24 72 2.4 71.67 20 5.09 No 28 1.71 Yes 24 0.81 Yes -19 0.74 Yes 51 85.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 9661874 - NM_003183 ADAM17 1 0.2 0.18 10 13.17 98.6 39 6.32 Yes 26 1.71 Yes 0 0 No -38 0.75 Yes 32 79.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 9665070 - NM_003183 ADAM17 1 0.46 0.33 21 6.02 77.36 29 6.24 Yes 74 0.26 No 0 0 No -29 0.87 Yes 41 89.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 9666372 - NM_003183 ADAM17 1 0.17 0.11 7 -1.3 68.05 27 4.43 No 44 0.45 No 0 0 No -27 0.59 No 44 76.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 9666394 - NM_003183 ADAM17 1 5.42 3.75 68 1.99 78.18 35 5.25 No 69 0.7 No 24 0.9 Yes -37 0.41 No 30 53.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 9676903 - NM_003183 ADAM17 1 0.43 0.28 17 5.2 65.01 37 5.7 Yes 11 1.32 Yes 0 0 No -23 0.72 Yes 47 62.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 9683356 - NM_003183 ADAM17 1 0.59 0.29 14 3.26 74.46 38 6.57 Yes 71 1.87 Yes 0 0 No -32 0.59 No 33 54.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 9683359 - NM_003183 ADAM17 1 1.3 0.54 29 4.72 78.22 35 6.34 Yes 68 1.87 Yes 0 0 No -29 0.6 No 36 61.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 9683410 - NM_003183 ADAM17 1 0.26 0.13 8 -3.44 0 30 6.63 Yes 17 1.88 Yes 0 0 No -29 0.9 Yes 41 93.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 9683890 - NM_003183 ADAM17 1 0.91 0.42 21 7.63 84.34 44 9.05 Yes 31 2.73 Yes 0 0 No -43 0.73 Yes 27 89.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156904744 - NM_033274 ADAM19 1 0.38 0.25 13 5.45 90.71 20 6.95 Yes 7 1.17 Yes 19 0.54 Yes -23 0.54 No 51 61.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 156915522 - NM_033274 ADAM19 1 0.16 0.11 8 7.68 94.31 15 4.61 No 6 1.11 Yes 26 0.9 Yes -18 0.83 Yes 52 73.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 156916183 - NM_033274 ADAM19 1 0.27 0.19 10 7.09 0 15 4.58 No 43 1.74 Yes 0 0 No -54 0.69 Yes 15 80.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156956641 - NM_033274 ADAM19 1 0.17 0.11 7 7.88 88.03 26 5 No 13 0.3 No 0 0 No -25 0.67 Yes 45 67.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 87564343 + NM_021721 ADAM22 1 6.76 1.6 58 -9.99 61.63 56 7.7 Yes 43 0.51 No 0 0 No -55 0.59 No 18 74.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 87571260 + NM_021721 ADAM22 1 0.59 0.13 8 5.64 74.69 30 5.8 Yes 68 0.27 No 0 0 No -30 0.6 No 40 63.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 87593948 + NM_021721 ADAM22 1 40.75 6.82 72 9.03 86.44 18 6.5 Yes 73 0.99 Yes 30 0.36 Yes -17 0.54 No 53 79.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 87600608 + NM_021721 ADAM22 1 15.08 2.57 63 4.65 79.4 28 6.69 Yes 15 0.95 Yes 0 0 No -27 0.41 No 38 49.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 87635515 + NM_021721 ADAM22 1 7.45 1.89 54 4.15 70.03 55 6.35 Yes 36 0.45 No 0 0 No -51 0.3 No 16 47.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 87647242 + NM_021721 ADAM22 1 0.77 0.24 15 9.47 86.78 40 6.94 Yes 37 -0.52 No 0 0 No -39 0.45 No 47 25.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 87688541 + NM_021721 ADAM22 1 5.81 1.4 52 8.43 77.94 24 6.31 Yes 11 1.23 Yes 0 0 No -23 0.91 Yes 47 92.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87688543 + NM_021721 ADAM22 1 0.35 0.11 7 0.75 73.47 26 6.46 Yes 13 1.23 Yes 0 0 No -25 0.93 Yes 45 92.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87706635 + NM_021721 ADAM22 1 0.27 0.13 9 0.09 60.63 27 5.51 No 14 0.31 No 0 0 No -26 0.8 Yes 44 74.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 87713820 + NM_021721 ADAM22 1 0.69 0.28 15 10.72 89.36 30 8.92 Yes 58 1.81 Yes 0 0 No -29 0.72 Yes 41 92.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87748139 + NM_021721 ADAM22 1 0.43 0.22 14 5.69 91.46 27 5.1 No 29 0.28 No 0 0 No -26 0.59 No 51 58.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 87749661 + NM_021721 ADAM22 1 0.87 0.36 21 7.15 77.21 37 7.55 Yes 24 1.96 Yes 0 0 No -36 0.68 Yes 34 81.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87808249 + NM_021721 ADAM22 1 0.57 0.15 8 4.65 77.46 101 8.3 Yes 14 1.4 Yes 26 0.89 Yes -26 0.89 Yes 44 90.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 135076625 - NM_001109 ADAM8 1 0.44 0.53 30 -5.39 51.21 38 6.63 Yes 74 1.09 Yes 0 0 No -22 0.45 No 40 18.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 135079896 - NM_001109 ADAM8 1 0.86 0.85 35 2.68 61.65 43 6.77 Yes 30 0.29 No 0 0 No -25 0.79 Yes 45 91.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 135081571 - NM_001109 ADAM8 1 1.45 1.69 56 7.84 88.09 18 6.29 Yes 67 1.95 Yes 18 0.53 Yes -31 0.68 Yes 39 55.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 135082295 - NM_001109 ADAM8 1 0.15 0.14 10 6.55 79.73 11 5.48 No -2 0.19 No 0 0 No -29 0.52 No 47 63.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 135082680 - NM_001109 ADAM8 1 0.14 0.14 9 5.91 86.23 17 4.8 No 4 1.05 Yes 0 0 No -16 0.69 Yes 54 76.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 135082694 - NM_001109 ADAM8 1 0.17 0.19 11 -2.45 0 19 4.24 No 74 0.48 No 0 0 No -18 0.74 Yes 52 61.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 135083544 - NM_001109 ADAM8 1 0.11 0.18 11 2.93 0 21 4.51 No 18 1.25 Yes 0 0 No -20 0.61 No 40 40.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 135084302 - NM_001109 ADAM8 1 0.42 0.53 29 -3.3 0 13 4.12 No 16 2.15 Yes 0 0 No -28 0.92 Yes 42 92.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 135084569 - NM_001109 ADAM8 1 0.08 0.11 7 -7.76 0 9 3.87 No 15 0.75 No 21 0.69 Yes -27 0.71 Yes 43 83.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 135085195 - NM_001109 ADAM8 1 0.5 0.47 23 1.26 0 18 4.08 No NA NA NA 0 0 No -36 0.36 No 53 37.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 135085204 - NM_001109 ADAM8 1 0.42 0.39 24 0.56 0 9 3.87 No NA NA NA 0 0 No -27 0.52 No 44 55.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 135085471 - NM_001109 ADAM8 1 0.09 0.17 9 -7.61 0 10 4 No 35 -3.15 No 21 0.93 Yes -9 0.38 No 61 32.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 135085565 - NM_001109 ADAM8 1 0.08 0.13 9 8.09 88.57 16 5.43 No 3 1.13 Yes 0 0 No -22 0.87 Yes 48 89.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 135085740 - NM_001109 ADAM8 1 0.16 0.21 13 3.5 74.82 27 6.91 Yes 41 0.67 No 0 0 No -26 0.9 Yes 44 91.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 135085970 - NM_001109 ADAM8 1 0.08 0.14 8 5.26 84.94 28 5.2 No -3 1.25 Yes 0 0 No -27 0.92 Yes 43 69.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 135086109 - NM_001109 ADAM8 1 4.48 6.57 70 8.6 82.82 43 7.92 Yes -4 1.43 Yes 27 0.91 Yes -28 0.61 No 28 74.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 135086365 - NM_001109 ADAM8 1 0.41 0.57 31 3.48 0 9 3.87 No 12 0.58 No 0 0 No -24 0.86 Yes 46 81.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 135086895 - NM_001109 ADAM8 1 0.12 0.14 9 -1.68 67.31 20 4.69 No 76 0.55 No 0 0 No -19 0.82 Yes 51 56.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 135086935 - NM_001109 ADAM8 1 2.77 3.07 67 7.38 86.05 16 4.69 No 36 0.57 No 24 0.58 Yes -20 0.59 No 33 65.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 135087325 - NM_001109 ADAM8 1 0.09 0.17 9 3.29 86.06 15 5.2 No NA NA NA 0 0 No -27 0.52 No 53 63.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 135087800 - NM_001109 ADAM8 1 0.12 0.19 10 8.4 88.75 19 5 No 6 1.02 Yes 0 0 No -18 0.63 No 52 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 135088495 - NM_001109 ADAM8 1 0.5 0.81 36 8.6 85.13 64 6.02 Yes 58 -2.85 No 26 0.46 Yes -20 0.74 Yes 50 76.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 38871485 + NR_027639 ADAM9 1 0.18 0.13 7 -1.17 78.55 38 6.7 Yes 14 0.28 No 0 0 No -26 0.34 No 44 38.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 38872010 + NR_027639 ADAM9 1 0.21 0.15 10 1.72 80.72 41 8.16 Yes 28 1.1 Yes 32 0.78 Yes -40 0.56 No 30 74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 38873370 + NR_027639 ADAM9 1 0.52 0.38 19 8.24 88.73 28 4.91 No 10 0.76 No 0 0 No -23 0.63 No 48 51.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 38883325 + NR_027639 ADAM9 1 0.77 0.53 27 -3.22 0 25 6.59 Yes 12 1.04 Yes 0 0 No -24 0.88 Yes 46 79.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38918585 + NR_027639 ADAM9 1 0.19 0.14 10 10.05 91.47 24 5.37 No 29 0.97 Yes 0 0 No -24 0.66 Yes 46 75.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38933665 + NR_027639 ADAM9 1 0.22 0.13 8 8.9 93.38 34 5.83 Yes 21 0.37 No 0 0 No -21 0.54 No 49 54.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 38933665 + NR_027639 ADAM9 1 1.62 0.96 41 8.9 93.38 34 5.83 Yes 21 0.37 No 0 0 No -21 0.54 No 49 54.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 38948761 + NR_027639 ADAM9 1 0.25 0.28 15 -5.6 0 15 4.09 No 31 0.69 No 21 0.59 Yes -36 0.84 Yes 34 88.48 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 38949190 + NR_027639 ADAM9 1 0.49 0.39 18 6.15 83.48 20 7.14 Yes 7 1.21 Yes 0 0 No -19 0.8 Yes 51 88.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 64758903 - NR_135689 ADAMTS6 1 0.57 0.13 7 9.63 88.27 29 5.18 No 53 0.85 Yes 0 0 No -25 0.53 No 42 59.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 938815 - NM_001284311 ADAP1 1 0.17 0.1 7 5.93 79.8 36 6.96 Yes 45 -2.18 No 0 0 No -33 0.55 No 37 80.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 938917 - NM_001284311 ADAP1 1 0.44 0.36 22 3.37 74.32 19 4.44 No 63 -2.6 No 0 0 No -23 0.72 Yes 47 47.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 940251 - NM_001284311 ADAP1 1 3.53 2.39 59 -8.63 75.23 35 5.82 Yes 22 0.72 No 0 0 No -34 0.85 Yes 36 75.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154558837 - NM_001025107 ADAR 1 0.09 0.58 31 -12.6 67.35 23 4.9 No -3 0.57 No 0 0 No -22 0.94 Yes 48 82.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154558852 - NM_001025107 ADAR 1 0.08 0.53 26 1.07 59.82 27 6.63 Yes 75 -5.27 No 19 0.96 Yes -26 0.8 Yes 44 81.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154561138 - NM_001025107 ADAR 1 0.09 0.64 36 4.3 0 9 2.58 No 20 1.76 Yes 0 0 No -32 0.86 Yes 38 96.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154561921 - NM_001025107 ADAR 1 0.03 0.15 9 -2.97 70.37 21 5.2 No 65 1.19 Yes 0 0 No -48 0.4 No 19 52.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154569415 - NM_001025107 ADAR 1 1.76 11.42 72 1.19 65.95 27 5.73 Yes 61 0.59 No 0 0 No -26 0.57 No 44 44.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154570667 - NM_001025107 ADAR 1 0.04 0.33 19 3.4 78.23 50 7.07 Yes 37 1.39 Yes 0 0 No -49 0.59 No 21 75.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 154571049 - NM_001025107 ADAR 1 0.03 0.19 13 3.42 83.34 17 4.68 No 42 1.17 Yes 0 0 No -38 0.78 Yes 32 78.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154574725 - NM_001025107 ADAR 1 0.45 0.56 28 10.44 88.72 24 6.16 Yes 11 1.08 Yes 23 0.89 Yes -23 0.9 Yes 47 93.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154578853 - NM_001025107 ADAR 1 0.2 0.22 15 7.35 82.69 69 9.49 Yes 56 0.24 No 0 0 No -30 0.61 No 40 58.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154592466 - NM_001025107 ADAR 1 0.11 0.13 9 9.21 79.57 29 7.49 Yes 16 1.27 Yes 0 0 No -28 0.64 No 42 52.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154597630 - NM_001025107 ADAR 1 1.06 1.31 48 4.43 87.69 38 6.92 Yes 25 1.29 Yes 0 0 No -30 0.58 No 40 55.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154598473 - NM_001025107 ADAR 1 0.21 0.26 16 3.01 0 30 7.81 Yes 17 1.54 Yes 0 0 No -29 0.94 Yes 41 95.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75632230 - NM_001324448 ADAT1 1 0.72 0.36 19 4.22 74.65 25 6.02 Yes 52 -2.63 No 24 0.95 Yes -24 0.97 Yes 46 96.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 75651051 - NM_001324448 ADAT1 1 0.11 0.1 7 9.05 91.01 21 5.76 Yes 8 0.67 No 0 0 No -20 0.67 Yes 50 82.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 75652597 - NM_001324448 ADAT1 1 6.5 4.72 70 11.3 88.73 43 7.61 Yes 73 -3.44 No 21 0.58 Yes -21 0.48 No 49 54.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 75653642 - NM_001324448 ADAT1 1 0.2 0.14 10 7.72 86.24 19 5.45 No 6 1.1 Yes 23 0.65 Yes -29 0.6 No 52 81.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 143751615 - NM_001286259 ADAT2 1 0.61 0.19 11 5.38 74.26 92 7.3 Yes 55 0.71 No 0 0 No -22 0.29 No 48 51.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 143753430 - NM_001286259 ADAT2 1 0.53 0.21 14 9.4 87 26 5.64 Yes 13 0.1 No 0 0 No -28 0.53 No 42 60.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 143753515 - NM_001286259 ADAT2 1 0.38 0.15 9 5.2 89.01 19 5 No 70 0.28 No 0 0 No -22 0.58 No 48 46.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 143762278 - NM_001286259 ADAT2 1 7.45 0.65 33 5.94 83.32 23 4.76 No 35 -2.2 No 0 0 No -23 0.58 No 50 53.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 78366901 + NM_001142545 ADCK1 1 10.43 1.15 42 6.04 81.37 23 4.58 No 75 -4.96 No 22 0.8 Yes -22 0.59 No 48 56.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 78374649 + NM_001142545 ADCK1 1 0.88 0.11 7 9.76 84.36 76 8.77 Yes 63 0.58 No 0 0 No -27 0.6 No 42 60.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145599241 + NM_174922 ADCK5 1 1.21 0.32 19 9.23 90.08 9 5.48 No 38 0.55 No 0 0 No -17 0.6 No 47 47.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145601081 + NM_174922 ADCK5 1 2.18 0.5 29 3.18 87.29 26 5.2 No 13 0.82 Yes 25 0.92 Yes -25 0.68 Yes 45 70.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145614462 + NM_174922 ADCK5 1 9.78 1.63 55 11.7 90.54 22 7.27 Yes 9 1.17 Yes 22 0.89 Yes -21 0.66 No 49 68.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 145616060 + NM_174922 ADCK5 1 13.9 2.68 69 0.18 0 54 7.26 Yes 41 0.25 No 27 0.55 Yes -32 0.55 No 24 65.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 145616097 + NM_174922 ADCK5 1 0.64 0.13 8 6.15 73.82 19 5.48 No 32 -3.31 No 0 0 No -29 0.52 No 52 58.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145616555 + NM_174922 ADCK5 1 2.19 0.53 28 3.2 71.81 18 5.56 Yes 5 1.34 Yes 22 0.88 Yes -17 0.8 Yes 53 92.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145617018 + NM_174922 ADCK5 1 4.49 0.42 24 3.8 62.22 28 6.71 Yes 48 1.48 Yes 0 0 No -27 0.96 Yes 43 55.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 145617144 + NM_174922 ADCK5 1 4.37 0.85 38 2.88 0 24 5.87 Yes 63 -2.2 No 0 0 No -24 0.82 Yes 46 80.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145617176 + NM_174922 ADCK5 1 0.54 0.11 8 1.6 82.56 22 4.89 No 6 -1.93 No 0 0 No -21 0.96 Yes 49 82.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 25043321 - NM_001320613 ADCY3 1 5.2 3.65 63 6.13 75.68 22 8 Yes 18 -1.72 No 21 0.87 Yes -21 0.83 Yes 49 80.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 25044506 - NM_001320613 ADCY3 1 0.32 0.33 18 -7.43 0 33 7.06 Yes 20 2.08 Yes 0 0 No -32 0.91 Yes 38 86.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25050850 - NM_001320613 ADCY3 1 0.13 0.13 8 5.28 84.63 23 5.67 Yes 4 1.55 Yes 0 0 No -22 0.93 Yes 48 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25050893 - NM_001320613 ADCY3 1 6.97 6.58 71 6.59 82.7 51 7.74 Yes 12 1.3 Yes 24 0.89 Yes -24 0.91 Yes 46 78.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 25051026 - NM_001320613 ADCY3 1 0.14 0.13 8 0.66 0 62 8.03 Yes 49 1.32 Yes 0 0 No -39 0.61 No 31 60.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 25051096 - NM_001320613 ADCY3 1 0.13 0.14 9 2.2 71.43 22 5.29 No 62 0.71 No 0 0 No -21 0.8 Yes 49 79.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 25056696 - NM_001320613 ADCY3 1 0.14 0.14 8 4.02 76.31 28 5.82 Yes -1 0.44 No 0 0 No -27 0.79 Yes 43 64.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 25056790 - NM_001320613 ADCY3 1 0.29 0.22 13 3.25 83.21 60 8.46 Yes 47 1.44 Yes 0 0 No -59 0.51 No 11 59.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 25057863 - NM_001320613 ADCY3 1 1.27 1.22 51 9.67 86.94 49 6.32 Yes 60 -2.04 No 0 0 No -22 0.58 No 25 54.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 25061782 - NM_001320613 ADCY3 1 2.98 2.06 57 7.55 82.74 24 8.1 Yes 1 0.45 No 23 0.92 Yes -23 0.94 Yes 47 90.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 25064271 - NM_001320613 ADCY3 1 0.73 0.65 28 -12.69 0 9 4.36 No 63 1.13 Yes 24 0.66 Yes -56 0.26 No 54 11.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 25064486 - NM_001320613 ADCY3 1 0.09 0.14 8 7.63 88.19 24 5.1 No 45 1.1 Yes 0 0 No -23 0.88 Yes 47 93.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25065224 - NM_001320613 ADCY3 1 0.83 0.86 27 2.91 68.86 35 5.55 No 39 2.39 Yes 21 0.73 Yes -21 0.82 Yes 36 74.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 25078455 - NM_001320613 ADCY3 1 0.17 0.21 12 10.03 83.36 28 6.52 Yes 15 1.23 Yes 0 0 No -27 0.86 Yes 43 79.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25110655 - NM_001320613 ADCY3 1 0.53 0.24 16 6.79 92.81 32 6.04 Yes 19 0.12 No 0 0 No -31 0.87 Yes 39 83.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 25112388 - NM_001320613 ADCY3 1 1.13 0.65 33 7.04 89.52 32 5.92 Yes 4 0.45 No 0 0 No -31 0.51 No 39 61.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 25120797 - NM_001320613 ADCY3 1 0.32 0.21 10 7.36 90.55 24 4.93 No 64 1.94 Yes 0 0 No -23 0.92 Yes 47 92.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25128883 - NM_001320613 ADCY3 1 0.32 0.22 11 9.62 81.59 38 6.48 Yes 70 1.56 Yes 0 0 No -28 0.61 No 42 68.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 25142048 - NM_001320613 ADCY3 1 1.12 0.24 14 4.14 0 9 3.87 No 11 0.73 No 0 0 No -23 0.91 Yes 47 91.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50323131 + NM_001114 ADCY7 1 1.02 0.42 23 8.57 86.91 44 7.07 Yes 48 1.42 Yes 43 0.6 Yes -43 0.77 Yes 27 92.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50325699 + NM_001114 ADCY7 1 0.13 0.11 7 4.23 83.22 58 7.85 Yes 59 0.67 No 0 0 No -35 0.8 Yes 35 90.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50334629 + NM_001114 ADCY7 1 0.75 0.5 25 1.59 0 25 6.56 Yes 12 1.01 Yes 0 0 No -24 0.89 Yes 46 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 50335578 + NM_001114 ADCY7 1 0.96 0.47 21 6.07 79.58 24 5.48 No 62 -4.78 No 23 0.91 Yes -23 0.93 Yes 47 77.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50335596 + NM_001114 ADCY7 1 0.24 0.11 7 4.51 82.09 26 5.2 No 13 0.25 No 0 0 No -25 0.89 Yes 45 86.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50339416 + NM_001114 ADCY7 1 1.45 0.72 39 -2.73 70.24 30 5.66 Yes -2 0.24 No 0 0 No -29 0.85 Yes 41 90.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50340944 + NM_001114 ADCY7 1 0.78 0.49 25 5.21 76.67 31 6.08 Yes 48 -3.97 No 20 0.95 Yes -24 0.49 No 46 43.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 50344364 + NM_001114 ADCY7 1 8.31 4.76 72 8.34 83.77 30 5.8 Yes 69 -1.69 No 23 0.92 Yes -23 0.77 Yes 47 70.72 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50346864 + NM_001114 ADCY7 1 0.43 0.22 10 2.67 60.39 43 7.6 Yes 30 0.86 Yes 0 0 No -42 0.54 No 28 57.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 50349251 + NM_001114 ADCY7 1 1.98 1.5 58 -1.85 0 11 4 No 20 0.92 Yes 23 0.77 Yes -32 0.73 Yes 38 71.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2888302 + NM_001286645 ADD1 1 0.16 0.53 28 13.8 89.54 29 5.92 Yes 39 0.81 Yes 0 0 No -28 0.88 Yes 42 92.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2900089 + NM_001286645 ADD1 1 0.1 0.33 20 4.47 82.31 21 6 Yes 70 -5.54 No 0 0 No -20 0.71 Yes 50 78.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 2900886 + NM_001286645 ADD1 1 0.09 0.24 13 7.56 82.4 37 7.12 Yes 35 0.88 Yes 0 0 No -36 0.38 No 34 60.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 2901744 + NM_001286645 ADD1 1 0.04 0.14 8 8.79 90.61 25 4.31 No 68 -3.54 No 0 0 No -21 0.56 No 47 48.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 111865757 + NM_001320591 ADD3 1 1.12 1.42 48 11.77 91.11 25 6.71 Yes 73 -3.79 No 24 0.73 Yes -24 0.72 Yes 46 76.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 14502202 + NM_078481 ADGRE5 1 0.27 0.19 11 5 79.8 25 6.15 Yes 65 0.29 No 27 0.81 Yes -24 0.65 No 46 72.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 14512466 + NM_078481 ADGRE5 1 0.04 0.1 7 0.92 71.83 28 9.45 Yes 15 1.27 Yes 0 0 No -27 0.82 Yes 43 53.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 14517900 + NM_078481 ADGRE5 1 0.29 0.42 23 2.61 69.36 22 6.08 Yes 9 0.79 Yes 0 0 No -21 0.87 Yes 49 84.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14517999 + NM_078481 ADGRE5 1 1.08 1.67 53 6.94 85.73 34 7.21 Yes 21 2.38 Yes 0 0 No -33 0.53 No 37 91.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 14519299 + NM_078481 ADGRE5 1 0.06 0.13 7 10.03 90.2 49 7.12 Yes 3 1.31 Yes 0 0 No -34 0.54 No 36 74.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 57596297 + NM_153837 ADGRG5 1 1 0.6 29 -11.83 68.47 25 5 No 70 -3.73 No 0 0 No -24 0.91 Yes 46 85.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57597069 + NM_153837 ADGRG5 1 0.2 0.17 9 6.17 81.41 15 5.05 No -3 1.02 Yes 0 0 No -25 0.76 Yes 48 50.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 57598922 + NM_153837 ADGRG5 1 0.23 0.13 9 7.08 79.31 33 5.92 Yes 20 0.74 No 25 0.93 Yes -32 0.88 Yes 38 97.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57600497 + NM_153837 ADGRG5 1 0.37 0.29 15 0.23 70.24 39 6.24 Yes 26 1.29 Yes 19 0.97 Yes -38 0.57 No 32 85.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 57600514 + NM_153837 ADGRG5 1 1.94 1.56 52 -5.32 0 24 5.1 No 11 1.83 Yes 0 0 No -23 0.87 Yes 15 61.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 57601362 + NM_153837 ADGRG5 1 0.28 0.22 12 5.68 85.49 23 5.91 Yes 32 0.3 No 21 0.66 Yes -17 0.48 No 53 59.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 100001877 - NM_000671 ADH5 1 0.17 0.6 28 7.8 82.86 31 5.56 Yes 10 0.98 Yes 22 0.91 Yes -22 0.39 No 40 51.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 100006785 - NM_000671 ADH5 1 0.18 0.25 16 8.87 82.69 22 6.57 Yes 9 1.67 Yes 21 0.8 Yes -36 0.6 No 34 59.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 99993613 - NM_000671 ADH5 1 0.05 0.19 12 0.77 63.75 22 5 No 67 -2.78 No 22 0.88 Yes -22 0.88 Yes 48 89.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 99996273 - NM_000671 ADH5 1 0.06 0.17 12 4.03 75.57 56 7.3 Yes 43 1 Yes 0 0 No -29 0.42 No 41 60.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 3513908 - NM_001306077 ADI1 1 0.48 0.83 37 3.01 0 31 6.56 Yes 18 1.57 Yes 0 0 No -30 0.95 Yes 40 95.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 202912992 - NM_001290629 ADIPOR1 1 0.15 0.38 20 8.64 81.22 52 7.12 Yes 42 0.83 Yes 26 0.77 Yes -26 0.71 Yes 44 82.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 202914324 - NM_001290629 ADIPOR1 1 0.84 2.51 60 11.89 99.46 31 5.77 Yes 58 0.28 No 30 0.96 Yes -21 0.58 No 49 53.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 1812051 + NM_024551 ADIPOR2 1 3.98 1.47 52 7.01 87.51 27 5.47 No 14 1.06 Yes 26 0.85 Yes -26 0.88 Yes 44 92.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 1845244 + NM_024551 ADIPOR2 1 1.61 0.54 31 9.55 94.37 31 7.2 Yes 18 1.16 Yes 0 0 No -30 0.88 Yes 40 84.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 1853687 + NM_024551 ADIPOR2 1 0.57 0.22 15 8.51 86.62 21 6.79 Yes 16 1.27 Yes 0 0 No -20 0.69 Yes 50 73.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 1866835 + NM_024551 ADIPOR2 1 0.24 0.38 26 8.14 90.72 23 6.32 Yes 10 1.41 Yes 0 0 No -22 0.96 Yes 48 94.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 1878751 + NM_024551 ADIPOR2 1 0.72 1.13 45 6.81 90.92 43 6.93 Yes 46 1.03 Yes 0 0 No -42 0.75 Yes 28 66.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 1886994 + NM_024551 ADIPOR2 1 0.05 0.11 7 -1.29 58.68 19 6.15 Yes 73 0.12 No 31 0.71 Yes -23 0.36 No 46 21.15 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 1892171 + NM_024551 ADIPOR2 1 1.21 1.64 55 4.74 84.41 77 9.4 Yes 64 2.14 Yes 0 0 No -39 0.09 No 43 15.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 1895187 + NM_024551 ADIPOR2 1 0.36 0.43 24 7.56 85.44 27 6.63 Yes 56 0.82 Yes 0 0 No -26 0.92 Yes 44 96.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 75929679 + NM_001202450 ADK 1 0.6 0.26 12 8.57 90.25 22 6.28 Yes 9 0.51 No 0 0 No -28 0.34 No 42 55.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 75934173 + NM_001202450 ADK 1 1.45 0.63 31 9.78 92.28 29 5.38 No 55 -2.94 No 29 0.51 Yes -29 0.73 Yes 41 43.94 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 76000685 + NM_001202450 ADK 1 0.45 1.01 39 8.64 85.88 34 5.47 No 76 1.28 Yes 0 0 No -31 0.35 No 46 50.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 76002495 + NM_001202450 ADK 1 2.03 4.35 67 3.74 74.25 56 9.52 Yes 43 1.34 Yes 0 0 No -27 0.55 No 47 56.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 76042615 + NM_001202450 ADK 1 0.13 0.28 18 8.52 83.99 35 5.88 Yes 2 0.73 No 0 0 No -34 0.52 No 36 77.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 76077942 + NM_001202450 ADK 1 0.08 0.14 7 1.08 0 40 6.16 Yes 27 0.72 No 0 0 No -26 0.61 No 44 42.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 76079066 + NM_001202450 ADK 1 0.15 0.26 16 5.42 89.97 23 4.9 No 74 -4.35 No 0 0 No -23 0.44 No 50 45.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 76089988 + NM_001202450 ADK 1 0.31 0.54 26 9.14 84.94 27 7.91 Yes 14 1.15 Yes 0 0 No -26 0.54 No 44 66.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 76095649 + NM_001202450 ADK 1 0.11 0.22 12 8.86 94.94 29 6.37 Yes 37 0.23 No 0 0 No -28 0.63 No 42 56.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 76098902 + NM_001202450 ADK 1 0.09 0.13 8 7.73 86.87 26 7.55 Yes 13 1.81 Yes 0 0 No -25 0.92 Yes 45 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 76100378 + NM_001202450 ADK 1 0.68 1.1 45 7.33 81.88 35 4.65 No 70 -1.93 No 0 0 No -25 0.46 No 36 60.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 76106434 + NM_001202450 ADK 1 0.44 0.65 28 10.65 91.54 28 5.83 Yes 15 0.61 No 0 0 No -27 0.64 No 43 83.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 76118201 + NM_001202450 ADK 1 0.17 0.28 17 5.99 86.43 27 7.32 Yes 14 0.9 Yes 0 0 No -26 0.67 Yes 48 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 76140686 + NM_001202450 ADK 1 0.33 0.54 28 11.61 88.85 21 6.63 Yes 8 2.09 Yes 0 0 No -20 0.92 Yes 50 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 76351517 + NM_001202450 ADK 1 0.07 0.21 11 -1.42 70.76 28 7.89 Yes 15 1.78 Yes 0 0 No -27 0.89 Yes 43 90.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 76361545 + NM_001202450 ADK 1 2.23 5.26 70 7.56 81.39 28 4.83 No 15 0.85 Yes 0 0 No -31 0.69 Yes 39 83.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 76390104 + NM_001202450 ADK 1 0.06 0.15 8 9.63 99.43 29 6.75 Yes 16 0.6 No 0 0 No -28 0.36 No 42 67.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 76391798 + NM_001202450 ADK 1 0.06 0.14 9 9.06 82.97 40 4.42 No 47 0.11 No 0 0 No -26 0.45 No 31 32.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 76431000 + NM_001202450 ADK 1 0.29 0.57 31 10.48 98.64 30 5.48 No 26 1.56 Yes 0 0 No -29 0.82 Yes 41 90.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 76440169 + NM_001202450 ADK 1 0.1 0.17 11 9.18 80.24 54 5.47 No 31 0.35 No 0 0 No -28 0.7 Yes 42 61.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 76446456 + NM_001202450 ADK 1 0.08 0.17 10 12.8 87.01 50 7.79 Yes 37 1.44 Yes 0 0 No -49 0.86 Yes 21 90.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 49506495 - NM_001282532 ADNP 1 0.29 0.74 31 11.71 87.74 30 6.34 Yes 17 1.69 Yes 0 0 No -29 0.53 No 41 71.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 49517848 - NM_001282532 ADNP 1 0.34 0.88 36 7.15 82.79 40 7.38 Yes 27 1.41 Yes 0 0 No -39 0.86 Yes 31 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 49519554 - NM_001282532 ADNP 1 0.37 0.82 35 4.05 81.21 27 5.38 No 42 -2.87 No 0 0 No -26 0.64 No 44 44.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 77879984 + NM_014913 ADNP2 1 0.28 0.1 7 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -33 0.46 No 54 52.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 77890072 + NM_014913 ADNP2 1 0.83 0.39 21 7.65 84.04 29 8.5 Yes 16 0.77 No 0 0 No -28 0.83 Yes 42 85.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 77891574 + NM_014913 ADNP2 1 0.49 0.36 18 7.17 87.55 34 5.48 No 32 1.02 Yes 37 0.28 Yes -37 0.93 Yes 33 95.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 77893496 + NM_014913 ADNP2 1 0.15 0.11 7 -6.24 78.14 32 3.62 No 34 1.31 Yes 0 0 No -25 0.91 Yes 45 94.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 73045174 - NR_023318 ADPGK 1 0.93 0.71 30 4.6 86.49 27 5.2 No 18 0.46 No 0 0 No -25 0.5 No 45 52.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 73045237 - NR_023318 ADPGK 1 80.42 63.83 72 4.46 78.52 30 5.63 Yes 66 -2.72 No 29 0.46 Yes -21 0.43 No 49 58.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 73045237 - NR_023318 ADPGK 1 0.97 0.72 31 4.46 78.52 30 5.63 Yes 66 -2.72 No 29 0.46 Yes -21 0.43 No 49 58.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 73045237 - NR_023318 ADPGK 1 0.49 0.39 19 4.46 78.52 30 5.63 Yes 66 -2.72 No 29 0.46 Yes -21 0.43 No 49 58.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 73045483 - NR_023318 ADPGK 1 0.65 0.47 20 10.52 91.36 33 5.74 Yes 75 0.27 No 0 0 No -26 0.73 Yes 46 63.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 73048732 - NR_023318 ADPGK 1 0.2 0.25 15 -4.34 0 14 5.25 No 60 1.19 Yes 0 0 No -21 0.68 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 73050753 - NR_023318 ADPGK 1 0.29 0.35 21 10.54 89.62 42 5.89 Yes 49 1.14 Yes 0 0 No -29 0.68 Yes 41 75.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 73052649 - NR_023318 ADPGK 1 0.35 0.43 24 1.5 71.5 32 7.14 Yes 19 0.58 No 0 0 No -31 0.91 Yes 39 90.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 73055839 - NR_023318 ADPGK 1 0.26 0.31 18 9.19 84.77 44 5.27 No 21 0.93 Yes 0 0 No -43 0.39 No 40 66.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 119299326 + NM_001125 ADPRH 1 1.69 0.25 16 -3.69 69.92 25 7.9 Yes 12 0.28 No 29 0.67 Yes -24 0.62 No 46 75.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 119299331 + NM_001125 ADPRH 1 14.86 2.32 57 -0.72 0 30 8.2 Yes 17 0.25 No 29 0.67 Yes -29 0.58 No 41 67.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 36556847 + NM_017825 ADPRHL2 1 0.23 0.17 11 0.66 68.98 26 6.22 Yes 13 1.41 Yes 0 0 No -25 0.95 Yes 45 93.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 10608402 + NM_020233 ADPRM 1 1.27 0.11 7 9 96.01 9 5 No 42 -3.26 No 0 0 No -24 0.91 Yes 46 86.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 60882716 + NM_007002 ADRM1 1 0.1 0.32 18 4.22 75.11 41 6.86 Yes 28 1.56 Yes 0 0 No -32 0.8 Yes 38 90.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60882630 + NM_007002 ADRM1 1 0.34 1.1 44 5.17 80.38 36 6.24 Yes 70 -5.13 No 23 0.89 Yes -32 0.61 No 38 61.6 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 60883038 + NM_007002 ADRM1 1 0.12 0.38 21 4.94 66.06 37 6.56 Yes 24 1.04 Yes 23 0.95 Yes -36 0.84 Yes 34 71.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 60883348 + NM_007002 ADRM1 1 0.04 0.13 8 8.81 78.47 18 5.64 Yes -4 1.4 Yes 0 0 No -17 0.54 No 53 80.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 40743397 + NR_134256 ADSL 1 0.04 0.11 8 8.06 85.36 28 6.04 Yes 66 1.34 Yes 0 0 No -27 0.74 Yes 43 69.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 40744400 + NR_134256 ADSL 1 0.14 0.26 11 9.27 80.56 28 6.4 Yes 15 1.77 Yes 0 0 No -27 0.89 Yes 43 91.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 40754858 + NR_134256 ADSL 1 0.09 0.36 22 2.3 0 23 5.39 No 10 1.01 Yes 31 0.72 Yes -22 0.92 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 40755267 + NR_134256 ADSL 1 0.12 0.56 29 2.96 0 34 4.2 No 49 0.07 No 0 0 No -28 0.72 Yes 42 77.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 40756407 + NR_134256 ADSL 1 0.05 0.21 12 -2.72 76.77 32 5.49 No 19 1.17 Yes 0 0 No -31 0.63 No 39 92.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 40757091 + NR_134256 ADSL 1 0.17 0.88 34 4.8 83.19 40 5.58 Yes 60 0.61 No 25 0.87 Yes -25 0.87 Yes 45 85.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 40760916 + NR_134256 ADSL 1 0.04 0.11 8 -4.52 0 16 4.47 No 44 1.21 Yes 0 0 No -56 0.5 No 14 71.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 40760919 + NR_134256 ADSL 1 0.04 0.1 7 3.85 92.78 19 4.8 No 47 1.2 Yes 0 0 No -18 0.49 No 11 51.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 40762445 + NR_134256 ADSL 1 0.04 0.14 9 -0.17 0 16 3.87 No 32 1.34 Yes 0 0 No -44 0.47 No 26 79.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 244574727 - NM_001126 ADSS 1 0.05 0.13 8 -8.51 0 21 4.58 No 21 0.59 No 0 0 No -40 0.54 No 30 69.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 244576932 - NM_001126 ADSS 1 0.1 0.24 13 10.32 87.96 34 7.42 Yes 70 1.58 Yes 0 0 No -33 0.83 Yes 37 93.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 244593402 - NM_001126 ADSS 1 0.17 0.43 25 3.74 79.43 19 5.47 No 6 0.39 No 0 0 No -35 0.74 Yes 35 78.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 244595367 - NM_001126 ADSS 1 0.87 2.19 66 13.18 95.02 39 8.52 Yes 51 0.5 No 0 0 No -44 0.37 No 29 52.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 244596799 - NM_001126 ADSS 1 0.16 0.42 25 7.65 93.31 31 7.6 Yes 18 1.3 Yes 0 0 No -30 0.88 Yes 40 78.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 19619681 + NM_001267043 AEBP2 1 2.28 2.92 65 9.49 79.06 22 6.06 Yes 29 1.12 Yes 0 0 No -21 0.8 Yes 49 78.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 19636878 + NM_001267043 AEBP2 1 0.11 0.19 10 7.09 80.22 34 6.12 Yes 12 0.46 No 0 0 No -33 0.48 No 37 69.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 19641246 + NM_001267043 AEBP2 1 0.08 0.15 11 10.07 88.27 32 7.42 Yes 19 1.6 Yes 0 0 No -31 0.94 Yes 39 94.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 19668354 + NM_001267043 AEBP2 1 0.13 0.28 12 10.79 94.4 30 4.52 No 31 1.27 Yes 0 0 No -29 0.6 No 41 59.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 19670647 + NM_001267043 AEBP2 1 0.63 1.33 55 12.32 86.76 26 5.63 Yes 13 0.34 No 0 0 No -25 0.83 Yes 45 68.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 19673658 + NM_001267043 AEBP2 1 0.37 0.11 7 9.72 88.05 32 6.5 Yes 35 0.44 No 0 0 No -31 0.9 Yes 39 82.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 89169348 + NM_022767 AEN 1 0.19 0.22 15 3.47 74.88 21 6.48 Yes NA NA NA 34 0.88 Yes -20 0.65 No 64 32.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 89173285 + NM_022767 AEN 1 2.95 6.11 72 2.29 79.71 20 5.48 No 37 0.95 Yes 22 0.61 Yes -23 0.71 Yes 51 80.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 3053602 - NM_198969 AES 1 0.27 2.85 57 10.78 83.87 54 5.67 Yes NA NA NA 0 0 No -47 0.43 No 40 68.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 3054033 - NM_198969 AES 1 0.01 0.11 7 -3.38 0 10 3.07 No 18 1.65 Yes 0 0 No -30 0.88 Yes 40 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3054036 - NM_198969 AES 1 3.39 38.72 72 1.76 72.23 28 6.24 Yes 15 1.65 Yes 0 0 No -27 0.9 Yes 43 87.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3054205 - NM_198969 AES 1 0.01 0.11 8 4.06 0 21 5.82 Yes 8 0.85 Yes 32 0.71 Yes -20 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 3054239 - NM_198969 AES 1 0.6 6.47 71 11.22 90.31 27 5.74 Yes 14 0.58 No 0 0 No -26 0.9 Yes 44 91.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3054263 - NM_198969 AES 1 0.09 0.97 37 6.94 85.34 31 5.48 No 50 -2.71 No 0 0 No -23 0.68 Yes 47 64.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 3054390 - NM_198969 AES 1 0.01 0.11 8 4.42 82.29 64 5.57 Yes 51 1.16 Yes 0 0 No -39 0.8 Yes 31 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 168271062 + NM_001040000 AFDN 1 146.7 35.29 72 4.64 79.98 39 6.29 Yes 26 1.22 Yes 28 0.87 Yes -28 0.89 Yes 42 84.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 168272896 + NM_001040000 AFDN 1 57.96 23.51 72 2.16 76.79 20 4.64 No 7 0.79 Yes 28 0.67 Yes -22 0.44 No 39 46.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 168281114 + NM_001040000 AFDN 1 0.3 0.25 18 9.33 83.27 20 4.86 No 65 -2.83 No 0 0 No -25 0.73 Yes 45 80.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 168314082 + NM_001040000 AFDN 1 37.68 14.44 72 11.93 97.2 27 6.21 Yes 14 0.71 No 26 0.85 Yes -26 0.53 No 17 76.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 168315760 + NM_001040000 AFDN 1 0.2 0.14 9 6.54 77.7 25 5.5 No 51 0.54 No 0 0 No -20 0.44 No 46 53.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 168333248 + NM_001040000 AFDN 1 0.21 0.15 9 6.28 77.96 20 5.34 No 74 1.03 Yes 24 0.42 Yes -28 0.56 No 42 46.11 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 168335976 + NM_001040000 AFDN 1 0.32 0.25 10 9.15 85.03 35 6.71 Yes 22 1.22 Yes 0 0 No -34 0.89 Yes 36 89.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 168363112 + NM_001040000 AFDN 1 373.57 40.15 72 -1.14 0 19 4.47 No 6 0.69 No 18 0.62 Yes -18 0.9 Yes 52 87.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 87894981 + NM_001166693 AFF1 1 0.68 0.49 27 9.8 83.95 128 11.78 Yes -3 0.04 No 26 0.06 Yes -58 0.38 No 36 8.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 87903006 + NM_001166693 AFF1 1 0.42 0.31 17 8.63 78.8 26 5.37 No 13 2.02 Yes 0 0 No -25 0.9 Yes 45 96.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 87909589 + NM_001166693 AFF1 1 8.86 7.32 71 7.99 84.28 29 6.19 Yes 34 -2.47 No 0 0 No -28 0.36 No 42 38.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 87909620 + NM_001166693 AFF1 1 0.47 0.4 22 5.19 63.26 22 3.39 No 65 -2.47 No 0 0 No -21 0.49 No 49 69.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 87911979 + NM_001166693 AFF1 1 0.15 0.11 8 8.88 89.7 28 5.69 Yes 74 -2.71 No 0 0 No -27 0.78 Yes 43 79.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 87914828 + NM_001166693 AFF1 1 0.11 0.13 7 5.63 78.14 26 6.01 Yes 68 0.4 No 0 0 No -25 0.66 No 45 78.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 87916652 + NM_001166693 AFF1 1 0.22 0.18 13 -2.73 83.84 28 7.42 Yes 15 1.82 Yes 0 0 No -27 0.91 Yes 43 93.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 87916830 + NM_001166693 AFF1 1 0.63 0.49 26 2.97 80.01 32 6.85 Yes 61 -2.65 No 0 0 No -31 0.89 Yes 39 89.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 87941657 + NM_001166693 AFF1 1 0.49 0.47 24 12.11 94.44 36 7.81 Yes 23 1.39 Yes 0 0 No -35 0.8 Yes 35 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 87949662 + NM_001166693 AFF1 1 0.11 0.11 7 11.09 95.4 27 6.92 Yes 14 1.73 Yes 0 0 No -26 0.8 Yes 44 87.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 87967850 + NM_001166693 AFF1 1 1.01 1.94 56 3.69 0 25 4.76 No 12 0.73 No 0 0 No -30 0.71 Yes 40 81.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 87981059 + NM_001166693 AFF1 1 0.08 0.13 7 3.66 0 33 7.23 Yes 20 0.91 Yes 0 0 No -32 0.96 Yes 38 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 88005274 + NM_001166693 AFF1 1 16.65 26.97 72 6.54 86.23 33 8.22 Yes 20 2.69 Yes 29 0.94 Yes -32 0.86 Yes 38 95.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 88010688 + NM_001166693 AFF1 1 0.31 0.64 34 0.31 77.74 25 5.67 Yes 12 1.06 Yes 0 0 No -24 0.58 No 46 85.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 88010732 + NM_001166693 AFF1 1 0.1 0.21 13 5.13 75.53 13 5.97 Yes 56 1.03 Yes 0 0 No -35 0.28 No 35 50.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 88017480 + NM_001166693 AFF1 1 0.05 0.1 7 2.52 0 37 6.09 Yes 34 1.12 Yes 0 0 No -36 0.51 No 24 66.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 88026929 + NM_001166693 AFF1 1 0.26 0.44 24 5.12 0 24 6.63 Yes 11 2.49 Yes 21 0.35 Yes -23 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 88027881 + NM_001166693 AFF1 1 0.33 0.6 31 4.67 75.19 39 5.26 No 13 0.66 No 0 0 No -25 0.52 No 27 38.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 88027977 + NM_001166693 AFF1 1 0.07 0.15 9 4.19 87.4 21 5.8 Yes 50 0.66 No 0 0 No -24 0.78 Yes 46 64.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 88045917 + NM_001166693 AFF1 1 0.17 0.21 12 5.3 82.38 24 5.74 Yes 11 0.65 No 0 0 No -23 0.96 Yes 47 96.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 88055625 + NM_001166693 AFF1 1 0.18 0.35 17 2.47 66.9 38 5.35 No 25 1.74 Yes 30 0.93 Yes -33 0.79 Yes 37 81.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 88054556 + NM_001166693 AFF1 1 0.05 0.1 7 5.41 76.7 22 6.13 Yes 39 0.83 Yes 0 0 No -21 0.96 Yes 49 95.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 88055625 + NM_001166693 AFF1 1 7.43 13.65 72 2.47 66.9 38 5.35 No 25 1.74 Yes 30 0.93 Yes -33 0.79 Yes 37 81.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 88055670 + NM_001166693 AFF1 1 1.43 2.53 67 8.07 85.24 18 6.63 Yes 70 1.75 Yes 0 0 No -36 0.55 No 37 63.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 88055818 + NM_001166693 AFF1 1 0.12 0.24 14 6.23 77.03 61 5.6 Yes 12 1.33 Yes 0 0 No -24 0.9 Yes 46 67.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 88060882 + NM_001166693 AFF1 1 0.09 0.1 7 3.67 77.61 44 7.06 Yes 40 0.73 No 0 0 No -44 0.47 No 27 58.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 132219881 - NM_014423 AFF4 1 0.36 0.18 13 10.88 82.47 19 6.48 Yes 6 0.62 No 0 0 No -26 0.48 No 44 57.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 132234058 - NM_014423 AFF4 1 1.37 0.86 39 1.57 62.73 26 5.98 Yes 26 0.16 No 0 0 No -25 0.67 Yes 45 69.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 132238176 - NM_014423 AFF4 1 0.43 0.32 19 0.11 0 26 6.32 Yes 13 1.62 Yes 0 0 No -25 0.92 Yes 45 95.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 132238207 - NM_014423 AFF4 1 0.19 0.13 9 -0.89 0 17 4.47 No 4 0.55 No 21 0.88 Yes -16 0.73 Yes 54 53.69 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 132249917 - NM_014423 AFF4 1 1.39 0.93 36 8.47 87.15 49 6.36 Yes 70 0.64 No 0 0 No -33 0.81 Yes 37 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 132253724 - NM_014423 AFF4 1 0.44 0.32 18 6.79 77.98 23 6.05 Yes -4 0.46 No 0 0 No -30 0.73 Yes 43 54.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 132273433 - NM_014423 AFF4 1 12.21 4.71 70 5.58 83.06 24 5 No 76 0.5 No 23 0.77 Yes -23 0.89 Yes 47 66.92 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 90046651 + NR_003228 AFG3L1P 1 1.07 0.15 8 0.57 79.87 20 5.1 No 54 1.24 Yes 24 0.78 Yes -19 0.65 No 51 52.03 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 90051853 + NR_003228 AFG3L1P 1 29.97 1.54 57 10.37 89.02 23 5.39 No 10 1.45 Yes 22 0.91 Yes -22 0.61 No 48 84.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 90053538 + NR_003228 AFG3L1P 1 2.38 0.15 10 -2.95 76.25 28 8.36 Yes 15 1.65 Yes 0 0 No -27 0.76 Yes 43 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 90054917 + NR_003228 AFG3L1P 1 2.06 0.13 9 6.91 73.84 21 6.09 Yes 69 0.83 Yes 0 0 No -20 0.78 Yes 50 70.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 90060193 + NR_003228 AFG3L1P 1 1.89 0.39 24 3.89 79.91 24 5.17 No -3 0.01 No 0 0 No -23 0.87 Yes 26 75.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 90060213 + NR_003228 AFG3L1P 1 0.79 0.21 12 6.75 79.33 24 4.99 No 11 0.13 No 0 0 No -23 0.77 Yes 47 54.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 12343722 - NM_006796 AFG3L2 1 0.29 0.53 27 2.61 73.52 23 4.43 No 48 -5.2 No 0 0 No -23 0.89 Yes 47 87.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 12346900 - NM_006796 AFG3L2 1 0.07 0.11 8 4.74 84.41 33 7.21 Yes 20 2.69 Yes 0 0 No -32 0.91 Yes 38 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 12351201 - NM_006796 AFG3L2 1 0.26 0.58 34 -4.89 0 13 4.24 No 42 0.6 No 0 0 No -54 0.51 No 16 82.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 12358380 - NM_006796 AFG3L2 1 0.05 0.13 8 4.02 80.14 23 5 No 61 0.91 Yes 0 0 No -22 0.82 Yes 48 87.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 12358396 - NM_006796 AFG3L2 1 0.15 0.4 21 8.33 67.7 34 7.14 Yes 21 0.91 Yes 0 0 No -33 0.86 Yes 37 90.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 12359256 - NM_006796 AFG3L2 1 0.2 0.57 27 6.19 86.04 29 6.71 Yes 16 0.66 No 0 0 No -28 0.54 No 46 64.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 12360025 - NM_006796 AFG3L2 1 0.09 0.31 19 2.47 79.13 31 5.49 No 66 0.65 No 0 0 No -28 0.55 No 42 40.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 12361756 - NM_006796 AFG3L2 1 0.07 0.22 11 9.91 87.64 23 10.1 Yes 10 1.1 Yes 0 0 No -22 0.86 Yes 48 91.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 12367140 - NM_006796 AFG3L2 1 0.1 0.19 11 6.63 89.3 12 6.16 Yes 56 -1.42 No 27 0.9 Yes -24 0.86 Yes 46 90.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 12367517 - NM_006796 AFG3L2 1 0.05 0.11 7 7.83 80.46 36 5.42 No 23 1.23 Yes 0 0 No -28 0.68 Yes 42 62.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 76184997 + NM_001145526 AFMID 1 0.17 0.18 9 5.24 80.12 20 5.75 Yes 69 0.71 No 0 0 No -19 0.35 No 47 47.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76193226 + NM_001145526 AFMID 1 0.13 0.13 8 3.52 0 18 4.47 No 34 1.04 Yes 23 0.87 Yes -17 0.65 No 53 62.11 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 76188124 + NM_001145526 AFMID 1 0.46 0.4 20 5.5 90.92 28 5.29 No 63 0.12 No 0 0 No -27 0.7 Yes 43 53.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 76188717 + NM_001145526 AFMID 1 0.56 0.53 28 7.96 83.92 20 6.85 Yes 7 1.21 Yes 19 0.52 Yes -25 0.62 No 51 75.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 76190819 + NM_001145526 AFMID 1 2.66 2.35 63 6.26 93.6 28 5.13 No 45 0.99 Yes 0 0 No -27 0.53 No 43 55.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76193215 + NM_001145526 AFMID 1 1.43 1.51 46 0.03 67.32 24 4.98 No 23 1.05 Yes 23 0.87 Yes -24 0.6 No 47 71.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 76193226 + NM_001145526 AFMID 1 3.4 3.36 64 3.52 0 18 4.47 No 34 1.04 Yes 23 0.87 Yes -17 0.65 No 53 62.11 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 76198575 + NM_001145526 AFMID 1 0.93 0.9 41 -5.24 74.39 24 5.29 No 11 1.53 Yes 27 0.92 Yes -23 0.81 Yes 47 94.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 64794699 + NM_203437 AFTPH 1 0.08 0.19 10 -1.6 0 37 6.59 Yes -2 0.08 No 0 0 No -40 0.56 No 30 47.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 64808233 + NM_203437 AFTPH 1 1.95 0.49 24 1.43 68.4 74 9.13 Yes 35 0.62 No 0 0 No -21 0.67 Yes 49 75.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 64819018 + NM_203437 AFTPH 1 211.56 113.49 72 4.65 88.84 29 6.55 Yes 72 2.1 Yes 28 0.8 Yes -28 0.9 Yes 42 88.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 178355636 - NM_000027 AGA 1 0.36 0.25 13 -1.39 0 13 4.12 No 10 0.98 Yes 23 0.61 Yes -30 0.28 No 20 29.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 178358151 - NM_000027 AGA 1 0.5 0.32 17 5.77 87.45 25 4.99 No 62 0.03 No 0 0 No -27 0.37 No 43 59.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 58124395 - NM_001122772 AGAP2 1 0.97 0.64 35 -1.92 68.89 30 5.16 No 17 1.18 Yes 0 0 No -29 0.91 Yes 41 93.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 58125024 - NM_001122772 AGAP2 1 0.2 0.13 8 2.41 0 23 5.39 No 31 2.32 Yes 0 0 No -22 0.49 No 48 61.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 58127950 - NM_001122772 AGAP2 1 0.32 0.21 12 -2.41 0 10 4 No 26 2.02 Yes 0 0 No -38 0.9 Yes 32 90.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 150815560 + NM_001281300 AGAP3 1 1.6 0.67 29 8.74 85.91 26 5.29 No 13 1.24 Yes 25 0.96 Yes -25 0.89 Yes 45 85.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 150819811 + NM_001281300 AGAP3 1 1.04 0.31 16 9.34 85.43 36 6.9 Yes 23 0.33 No 28 0.4 Yes -36 0.45 No 35 62.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 150817606 + NM_001281300 AGAP3 1 7.38 1.93 51 6.83 82.74 29 6.24 Yes 7 2.42 Yes 28 0.92 Yes -28 0.71 Yes 42 87.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 150819811 + NM_001281300 AGAP3 1 24.76 6.68 70 9.34 85.43 36 6.9 Yes 23 0.33 No 28 0.4 Yes -36 0.45 No 35 62.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 150827290 + NM_001281300 AGAP3 1 4.12 1.49 47 5.31 70.9 32 6.71 Yes 19 1.4 Yes 0 0 No -31 0.97 Yes 39 97.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 51763208 + NM_001077665 AGAP6 1 0.53 0.11 8 11.58 83.11 26 6.19 Yes 62 0.44 No 0 0 No -28 0.63 No 27 43.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 51768259 + NM_001077665 AGAP6 1 6.85 0.79 33 4.65 84.56 30 6.4 Yes 17 1.43 Yes 0 0 No -29 0.9 Yes 41 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 51768263 + NM_001077665 AGAP6 1 4.11 0.5 25 0.38 0 34 6.71 Yes 21 1.41 Yes 0 0 No -33 0.89 Yes 37 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27278532 + NR_138023 AGBL5 1 0.2 0.14 8 -1.27 0 15 4.58 No 18 0.74 No 19 0.55 Yes -45 0.59 No 25 54.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 27278554 + NR_138023 AGBL5 1 0.41 0.31 17 0.85 0 25 5.57 Yes 40 0.73 No 0 0 No -24 0.92 Yes 46 93.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 228352332 + NM_001135187 AGFG1 1 0.07 0.17 11 9.6 84.62 27 5.29 No 66 1.67 Yes 0 0 No -26 0.93 Yes 44 89.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 228378564 + NM_001135187 AGFG1 1 0.06 0.11 8 7.28 80.07 14 6.68 Yes 1 0.65 No 0 0 No -31 0.8 Yes 39 83.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 228388454 + NM_001135187 AGFG1 1 0.05 0.18 11 7.31 81.69 29 4.66 No 6 1.04 Yes 21 0.8 Yes -28 0.63 No 42 57.54 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 228388534 + NM_001135187 AGFG1 1 0.08 0.26 15 8.3 88 16 5.17 No 65 1.16 Yes 0 0 No -23 0.68 Yes 47 65.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 228393406 + NM_001135187 AGFG1 1 0.07 0.14 8 7.93 82.31 39 8.44 Yes 57 0.81 Yes 0 0 No -38 0.85 Yes 32 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 228399623 + NM_001135187 AGFG1 1 0.25 0.49 23 6.99 84.54 28 5.74 Yes 73 0.99 Yes 27 0.61 Yes -26 0.5 No 44 69.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 228401306 + NM_001135187 AGFG1 1 0.17 0.49 28 7.22 84.59 27 7.97 Yes 14 1 Yes 24 0.39 Yes -26 0.36 No 43 45.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 228414774 + NM_001135187 AGFG1 1 1.72 5.42 72 4 76 30 6.29 Yes 17 1.26 Yes 29 0.8 Yes -33 0.71 Yes 41 60.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 228418419 + NM_001135187 AGFG1 1 621.48 248.39 72 3.44 78.21 24 6.44 Yes 11 0.02 No 24 0.76 Yes -24 0.69 Yes 47 67.99 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 100141736 + NM_006076 AGFG2 1 0.5 0.35 19 3.8 81.72 61 8.59 Yes 4 0.63 No 0 0 No -32 0.29 No 50 50.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100145302 + NM_006076 AGFG2 1 0.17 0.1 7 9.98 86.98 34 5.88 Yes 53 -3.13 No 0 0 No -30 0.37 No 40 32.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100150948 + NM_006076 AGFG2 1 0.2 0.21 13 11.48 86.18 17 5.27 No 52 1.29 Yes 25 0.87 Yes -24 0.61 No 47 58.43 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 100154216 + NM_006076 AGFG2 1 22.22 16.26 72 4.44 74.94 63 8.54 Yes 50 1.88 Yes 29 0.75 Yes -32 0.47 No 12 57.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 100154220 + NM_006076 AGFG2 1 0.76 0.5 21 -1.06 0 67 8.77 Yes 54 1.87 Yes 0 0 No -36 0.45 No 33 27.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 100157896 + NM_006076 AGFG2 1 0.51 0.35 18 10.03 95.59 22 6.77 Yes 9 1.21 Yes 0 0 No -21 0.95 Yes 49 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100160506 + NM_006076 AGFG2 1 2.27 1.35 46 6.45 81.14 13 5.44 No 0 2.37 Yes 0 0 No -23 0.46 No 54 59.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 76330226 + NM_018046 AGGF1 1 0.2 0.14 8 5.8 81.36 18 5.49 No 72 0.92 Yes 19 0.74 Yes -20 0.72 Yes 50 78.84 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 76335957 + NM_018046 AGGF1 1 0.56 0.71 33 3.01 0 35 6.12 Yes 22 0.37 No 0 0 No -34 0.92 Yes 36 94.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 76355447 + NM_018046 AGGF1 1 0.24 0.29 16 -3.87 0 14 3.85 No 19 0.82 Yes 0 0 No -49 0.43 No 39 62.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 76356294 + NM_018046 AGGF1 1 0.19 0.28 13 9.24 86.98 44 7.95 Yes 31 1.11 Yes 0 0 No -31 0.62 No 40 53.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 141255263 + NM_018238 AGK 1 0.33 0.15 11 -1.74 0 18 4.47 No 5 0.78 Yes 34 0.36 Yes -17 0.39 No 22 50.5 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 141293104 + NM_018238 AGK 1 0.15 0.29 18 3.74 75.69 10 4.97 No 69 0.29 No 26 0.32 Yes -26 0.67 Yes 52 68.52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 141294474 + NM_018238 AGK 1 0.19 0.39 23 10.62 86.91 35 7.63 Yes 22 1.75 Yes 0 0 No -34 0.96 Yes 36 96.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 141301263 + NM_018238 AGK 1 0.08 0.11 7 9.59 93.11 17 4.8 No 63 0.63 No 0 0 No -47 0.29 No 54 39.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 141310998 + NM_018238 AGK 1 0.11 0.15 9 2.22 0 30 5.57 Yes 52 0.44 No 0 0 No -29 0.96 Yes 41 98.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 141315962 + NM_018238 AGK 1 0.19 0.26 15 7.43 89.4 25 4.8 No 45 1.01 Yes 24 0.7 Yes -24 0.53 No 46 51.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 141323979 + NM_018238 AGK 1 1.4 2.04 58 8.57 87.64 26 6.16 Yes 13 1.13 Yes 0 0 No -25 0.88 Yes 45 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 141325174 + NM_018238 AGK 1 0.07 0.1 7 6.42 91.65 21 4.7 No 39 0.57 No 0 0 No -29 0.51 No 46 51.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 141350272 + NM_018238 AGK 1 1.41 1.18 40 13.1 95.68 23 5.39 No 54 -3.52 No 0 0 No -26 0.89 Yes 44 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 141351327 + NM_018238 AGK 1 0.15 0.11 7 -0.63 64.83 29 5.07 No 16 0.53 No 0 0 No -29 0.8 Yes 41 86.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 141352593 + NM_018238 AGK 1 0.16 0.17 8 -4.39 0 10 4 No 33 1.69 Yes 0 0 No -26 0.71 Yes 44 62.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 100340917 + NM_000646 AGL 1 0.12 0.1 7 1.62 0 26 6.65 Yes 13 1.06 Yes 0 0 No -25 0.91 Yes 45 93.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100353545 + NM_000646 AGL 1 0.63 0.58 29 4.79 0 21 3.2 No 22 0.27 No 0 0 No -45 0.66 No 25 62.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100356796 + NM_000646 AGL 1 0.15 0.1 7 5.58 80.41 31 3.87 No 51 -3.19 No 0 0 No -23 0.79 Yes 47 76.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100362391 + NM_000646 AGL 1 0.45 0.35 19 1.53 0 48 6.58 Yes 63 1.84 Yes 0 0 No -48 0.85 Yes 22 89.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100385961 + NM_000646 AGL 1 0.59 0.69 29 4.94 77.79 34 6.07 Yes 21 0.05 No 0 0 No -33 0.49 No 37 58.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100385980 + NM_000646 AGL 1 0.28 0.32 20 8.72 82.15 18 5.29 No 5 1.7 Yes 0 0 No -17 0.37 No 49 50.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 15899410 - NM_024758 AGMAT 1 1.37 0.58 29 7.44 82.21 23 5.39 No 30 0.68 No 0 0 No -22 0.89 Yes 48 78.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36354011 + NM_012199 AGO1 1 0.56 0.24 16 1.21 84.28 12 4.95 No 17 -1.81 No 21 0.94 Yes -26 0.29 No 52 43.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 36359192 + NM_012199 AGO1 1 1.03 1 40 10.54 90.44 25 5.47 No 12 0.25 No 0 0 No -24 0.84 Yes 46 60.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 36366931 + NM_012199 AGO1 1 0.47 0.33 17 2.31 70.28 48 8.66 Yes 46 1.09 Yes 0 0 No -24 0.84 Yes 46 72.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36383547 + NM_012199 AGO1 1 0.51 0.42 25 10.56 76.83 24 7.02 Yes 42 1.19 Yes 0 0 No -23 0.89 Yes 47 92.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36383632 + NM_012199 AGO1 1 0.14 0.13 9 4.92 79.61 20 6.03 Yes 7 0.72 No 0 0 No -23 0.85 Yes 47 82.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36384607 + NM_012199 AGO1 1 0.58 0.49 27 5.45 80.92 28 4.76 No 9 1.19 Yes 0 0 No -28 0.65 No 42 78.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 36384713 + NM_012199 AGO1 1 0.14 0.11 8 4 81.17 37 6.45 Yes 64 1.99 Yes 0 0 No -33 0.6 No 37 62.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36384785 + NM_012199 AGO1 1 0.37 0.28 17 6.95 84.75 34 7.4 Yes 21 0.48 No 0 0 No -33 0.64 No 44 56.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 141545764 - NM_012154 AGO2 1 0.29 0.32 17 3.86 63.02 16 4.01 No 39 1.04 Yes 0 0 No -25 0.59 No 46 70.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 141582703 - NM_012154 AGO2 1 1 1.01 42 5.85 82.29 22 5.66 Yes 72 0.25 No 21 0.85 Yes -21 0.78 Yes 49 84.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 141616014 - NM_012154 AGO2 1 3.46 0.76 37 11.49 93.92 22 5.4 No 9 0.83 Yes 20 0.88 Yes -21 0.94 Yes 49 92.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 36398381 + NM_024852 AGO3 1 1.28 0.46 25 7.56 92.67 53 5.68 Yes 40 1.11 Yes 0 0 No -25 0.48 No 48 45.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36408624 + NM_024852 AGO3 1 0.37 0.14 10 2.68 84.41 25 6.93 Yes 12 1.42 Yes 0 0 No -24 0.87 Yes 46 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36422134 + NM_024852 AGO3 1 1.06 0.36 20 4.84 90.25 18 4.9 No 5 0.57 No 0 0 No -17 0.7 Yes 53 49.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 36433491 + NM_024852 AGO3 1 0.39 0.21 12 10.43 86.79 21 5.02 No 23 0.75 No 0 0 No -23 0.62 No 47 71.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 36435727 + NM_024852 AGO3 1 0.38 0.18 9 6.22 80.21 22 5.29 No 21 1.88 Yes 0 0 No -21 0.78 Yes 49 67.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 36438482 + NM_024852 AGO3 1 0.3 0.25 15 10.07 88.27 38 7.45 Yes 29 1.08 Yes 0 0 No -37 0.84 Yes 33 74.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36439276 + NM_024852 AGO3 1 0.58 0.26 13 6.63 76.67 25 5.74 Yes 1 0.1 No 0 0 No -24 0.65 No 46 61.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 36441573 + NM_024852 AGO3 1 3.6 1.46 62 3.23 0 67 7.53 Yes 59 0.88 Yes 0 0 No -58 0.73 Yes 12 81.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36443018 + NM_024852 AGO3 1 0.52 0.21 15 4.19 0 28 7.01 Yes 15 0.59 No 0 0 No -30 0.48 No 31 50.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 36448221 + NM_024852 AGO3 1 15.43 6.36 72 8.68 94.39 24 5.61 Yes 11 0.62 No 23 0.8 Yes -23 0.81 Yes 47 84.8 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 36466543 + NM_024852 AGO3 1 3.8 1.49 53 11.27 89.71 30 4.43 No 10 0.82 Yes 0 0 No -22 0.8 Yes 48 54.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 36471319 + NM_024852 AGO3 1 16.28 4.14 70 4.76 81.32 53 6.48 Yes 40 0.7 No 0 0 No -20 0.79 Yes 50 76.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36501793 + NM_024852 AGO3 1 0.68 0.36 20 5.79 87.33 19 4.58 No 28 2.04 Yes 0 0 No -40 0.42 No 30 35.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36510715 + NM_024852 AGO3 1 0.39 0.13 9 8.72 90.93 41 4.59 No 48 2.09 Yes 0 0 No -24 0.7 Yes 46 87.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36514493 + NM_024852 AGO3 1 0.71 0.24 14 8.21 86.24 33 6.48 Yes 6 0.08 No 0 0 No -27 0.46 No 43 59.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 36291205 + NM_017629 AGO4 1 1.49 0.18 9 6.4 76.45 22 5.07 No 13 0.24 No 0 0 No -21 0.75 Yes 42 72.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36296666 + NM_017629 AGO4 1 1.94 0.15 10 6.74 81.76 31 5.82 Yes 56 1.72 Yes 0 0 No -27 0.63 No 43 66.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36297040 + NM_017629 AGO4 1 0.65 0.11 8 8.36 91.67 18 4.69 No 23 0.41 No 0 0 No -35 0.72 Yes 35 52.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 36305637 + NM_017629 AGO4 1 1.96 0.15 10 5.22 87.07 27 5.2 No 70 0.23 No 0 0 No -26 0.76 Yes 44 69.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36306781 + NM_017629 AGO4 1 1.06 0.13 8 3.72 79.12 22 5 No 61 0.99 Yes 0 0 No -21 0.83 Yes 49 63.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 139571290 - NM_006412 AGPAT2 1 0.3 0.13 8 9.28 87.55 16 5.69 Yes 39 -0.98 No 0 0 No -29 0.48 No 41 57.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45287019 + NM_020132 AGPAT3 1 4.14 1.89 56 9.06 73.32 32 4.73 No 10 0.91 Yes 31 0.86 Yes -31 0.84 Yes 39 82.57 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45302384 + NM_020132 AGPAT3 1 2.59 1.15 44 11.76 91.77 27 5.37 No 36 0.89 Yes 31 0.59 Yes -27 0.35 No 48 62.99 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 45307048 + NM_020132 AGPAT3 1 0.31 0.15 8 12.35 95.71 30 5.38 No 25 1.65 Yes 0 0 No -22 0.68 Yes 48 76.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45324119 + NM_020132 AGPAT3 1 0.17 0.14 10 2.55 70.14 34 4.88 No 49 1.34 Yes 0 0 No -33 0.8 Yes 37 89.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45341690 + NM_020132 AGPAT3 1 0.15 0.11 7 12.58 97.5 23 5.39 No 10 1.52 Yes 0 0 No -22 0.69 Yes 48 74.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45344089 + NM_020132 AGPAT3 1 1.6 1.01 29 8.56 86.44 30 7.07 Yes 17 1.64 Yes 0 0 No -29 0.85 Yes 41 91.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45360085 + NM_020132 AGPAT3 1 1.84 1.29 39 10.41 87.48 18 5.48 No 5 1.88 Yes 0 0 No -17 0.7 Yes 53 81.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45374430 + NM_020132 AGPAT3 1 0.52 0.38 19 8.89 73.92 30 5.51 No 1 1.16 Yes 27 0.8 Yes -29 0.76 Yes 41 92.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45380512 + NM_020132 AGPAT3 1 8.9 12.4 72 4.41 84.31 22 5.09 No 29 0.7 No 21 0.86 Yes -21 0.9 Yes 49 88.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45380577 + NM_020132 AGPAT3 1 0.2 0.26 14 3.21 77.27 21 5.58 Yes 74 0.07 No 0 0 No -20 0.81 Yes 50 89.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 45386845 + NM_020132 AGPAT3 1 0.15 0.21 14 7.07 77.43 49 7.35 Yes NA NA NA 0 0 No -48 0.53 No 22 77.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 45387749 + NM_020132 AGPAT3 1 0.12 0.17 12 3.15 63.5 36 6.08 Yes 29 0.29 No 24 0.19 Yes -35 0.76 Yes 35 63.1 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr21 45388616 + NM_020132 AGPAT3 1 0.44 0.93 37 10.87 84.77 22 5.72 Yes 9 1.13 Yes 0 0 No -21 0.72 Yes 49 74.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45390534 + NM_020132 AGPAT3 1 0.05 0.11 7 -12.16 0 26 6 Yes 13 1.65 Yes 0 0 No -25 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45391860 + NM_020132 AGPAT3 1 0.17 0.31 16 -3.36 63.22 20 4.69 No 14 1.82 Yes 0 0 No -19 0.84 Yes 44 27.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45391864 + NM_020132 AGPAT3 1 0.16 0.26 14 -4.03 0 24 5.1 No 18 1.82 Yes 0 0 No -23 0.9 Yes 47 42.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45391880 + NM_020132 AGPAT3 1 0.67 1.15 42 2.73 82.7 23 5 No 34 1.81 Yes 0 0 No -39 0.46 No 48 30.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 45403980 + NM_020132 AGPAT3 1 0.06 0.13 8 0.89 82.48 20 4.9 No 44 -1.21 No 0 0 No -19 0.94 Yes 51 88.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 6567001 + NM_018361 AGPAT5 1 1.6 1.78 52 9.98 84.41 33 8.53 Yes 20 1.34 Yes 32 0.92 Yes -32 0.89 Yes 38 90.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 6599172 + NM_018361 AGPAT5 1 0.15 0.44 23 -1.32 0 28 5.86 Yes 15 0.21 No 36 0.42 Yes -27 0.78 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 6599203 + NM_018361 AGPAT5 1 0.12 0.38 22 7.2 87.93 27 5.57 Yes -2 0.5 No 0 0 No -26 0.72 Yes 44 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 6608835 + NM_018361 AGPAT5 1 0.03 0.1 7 3.67 81.61 15 4.72 No 2 0.45 No 0 0 No -26 0.58 No 44 40.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 178297713 + NM_003659 AGPS 1 0.22 0.39 19 13.19 88.05 34 6.61 Yes 10 1.86 Yes 0 0 No -26 0.57 No 44 73.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 178386056 + NM_003659 AGPS 1 0.14 0.33 19 7.03 88.16 47 6.75 Yes 44 0.63 No 29 0.39 Yes -29 0.61 No 41 67.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 178306847 + NM_003659 AGPS 1 0.22 0.5 24 -9.41 77.45 16 5.82 Yes 3 1.11 Yes 0 0 No -27 0.75 Yes 43 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 178329448 + NM_003659 AGPS 1 0.06 0.14 8 6.47 79.76 21 5.91 Yes 8 0.64 No 0 0 No -20 0.74 Yes 50 60.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 178364346 + NM_003659 AGPS 1 0.08 0.21 12 -12.22 0 24 5.51 No 8 0.52 No 0 0 No -27 0.38 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 967164 + NM_001305275 AGRN 1 0.21 0.19 11 10.9 87.32 30 7.56 Yes 62 0.01 No 0 0 No -27 0.65 No 43 85.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 972109 + NM_001305275 AGRN 1 0.16 0.14 7 5.21 78.1 36 7.06 Yes 23 1.13 Yes 0 0 No -24 0.56 No 35 60.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 976540 + NM_001305275 AGRN 1 0.47 0.4 25 -0.53 61.89 11 6.48 Yes -2 1.34 Yes 22 0.94 Yes -10 0.86 Yes 60 29.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 977340 + NM_001305275 AGRN 1 0.34 0.35 20 1.18 0 29 6.82 Yes 8 1.92 Yes 0 0 No -28 0.86 Yes 42 85.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 978070 + NM_001305275 AGRN 1 0.43 0.22 14 9.01 88.74 91 9.06 Yes NA NA NA 0 0 No -31 0.62 No 46 54.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 978623 + NM_001305275 AGRN 1 0.24 0.11 7 4.84 0 26 5.66 Yes 13 1.46 Yes 0 0 No -25 0.77 Yes 45 81.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 978710 + NM_001305275 AGRN 1 1.17 0.5 28 4.16 79.7 12 5.1 No 21 -2.2 No 0 0 No -19 0.78 Yes 51 71.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 979250 + NM_001305275 AGRN 1 0.6 0.38 20 9.39 87.69 34 6.7 Yes NA NA NA 0 0 No -36 0.47 No 32 70.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 982882 + NM_001305275 AGRN 1 0.4 0.31 16 10.04 84.52 19 4.95 No 33 0.07 No 0 0 No -22 0.64 No 48 69.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 983161 + NM_001305275 AGRN 1 0.69 0.61 25 0.74 0 9 3.87 No 13 0.7 No 0 0 No -25 0.94 Yes 45 87.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 986111 + NM_001305275 AGRN 1 0.23 0.24 14 -3.97 0 12 3.87 No 14 1.77 Yes 0 0 No -26 0.95 Yes 44 93.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 986905 + NM_001305275 AGRN 1 0.15 0.13 9 8.35 89.45 14 5.57 Yes 75 1.87 Yes 0 0 No -18 0.43 No 43 45.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 987121 + NM_001305275 AGRN 1 0.11 0.14 9 -9.55 50.77 19 4.8 No 19 1.84 Yes 0 0 No -31 0.64 No 39 45.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 990445 + NM_001305275 AGRN 1 0.55 0.35 21 -10.53 77.26 56 6.82 Yes 24 0.83 Yes 0 0 No -36 0.59 No 34 72.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 990756 + NM_001305275 AGRN 1 1.58 0.94 44 7.49 76.26 31 6.36 Yes 18 1.27 Yes 0 0 No -30 0.92 Yes 40 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 88169188 - NM_001330701 AGTPBP1 1 1.41 0.96 41 10.9 91.87 27 5.93 Yes 14 0.53 No 26 0.8 Yes -24 0.55 No 46 67.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 88201118 - NM_001330701 AGTPBP1 1 0.34 0.28 19 5.37 84.41 21 7.81 Yes 61 0.72 No 0 0 No -34 0.54 No 50 59.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 88209496 - NM_001330701 AGTPBP1 1 0.4 0.28 14 5.06 84.93 21 5.83 Yes 34 0.56 No 0 0 No -32 0.82 Yes 38 84.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 88221031 - NM_001330701 AGTPBP1 1 0.3 0.28 15 8.17 85.58 34 5.33 No 36 1.48 Yes 0 0 No -28 0.54 No 42 61.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 88234018 - NM_001330701 AGTPBP1 1 0.18 0.17 8 4.07 79.37 25 5.34 No 51 1.08 Yes 0 0 No -24 0.3 No 13 74.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 88234070 - NM_001330701 AGTPBP1 1 0.62 0.61 29 6.89 82.97 12 5.48 No -1 1.11 Yes 28 0.9 Yes -25 0.66 Yes 45 67.53 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 88236721 - NM_001330701 AGTPBP1 1 1.47 1.15 50 12.08 81.55 22 5.38 No 17 0.47 No 0 0 No -29 0.89 Yes 41 92.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 88239803 - NM_001330701 AGTPBP1 1 0.16 0.13 8 6.37 74.44 30 5.66 Yes -3 0.33 No 0 0 No -29 0.38 No 44 52.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 88261351 - NM_001330701 AGTPBP1 1 1.14 0.74 34 5.57 73.06 20 5.71 Yes 0 2.17 Yes 21 0.87 Yes -19 0.76 Yes 51 87.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 88269751 - NM_001330701 AGTPBP1 1 0.27 0.19 12 1.22 0 20 5.03 No 28 0.73 No 0 0 No -40 0.85 Yes 30 92.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 88270116 - NM_001330701 AGTPBP1 1 25.84 14.96 72 8.16 90.69 21 4.97 No 8 0.22 No 20 0.59 Yes -20 0.52 No 50 44.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 88281136 - NM_001330701 AGTPBP1 1 0.19 0.11 8 7.78 0 14 4.47 No 15 1 Yes 0 0 No -27 0.86 Yes 43 77.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 88282918 - NM_001330701 AGTPBP1 1 0.25 0.14 10 8.94 83.99 21 4.92 No 8 0.53 No 0 0 No -20 0.6 No 50 61.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 88283006 - NM_001330701 AGTPBP1 1 0.26 0.19 14 9.73 83.96 36 8.28 Yes 67 1.58 Yes 0 0 No -35 0.7 Yes 35 68.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 247015299 - NM_001323343 AHCTF1 1 0.6 0.58 29 6.81 82.48 40 6.32 Yes 72 0.79 Yes 0 0 No -34 0.6 No 31 66.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 247015341 - NM_001323343 AHCTF1 1 0.85 0.79 35 8.8 77.06 43 7.85 Yes 65 1.51 Yes 42 0.56 Yes -42 0.55 No 28 89.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 247028636 - NM_001323343 AHCTF1 1 0.28 0.15 10 -2.25 0 28 5.66 Yes 15 0.71 No 27 0.85 Yes -27 0.86 Yes 43 86.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 247028640 - NM_001323343 AHCTF1 1 0.74 0.36 21 3.6 78.59 24 5.29 No 11 0.72 No 27 0.85 Yes -23 0.86 Yes 47 87.86 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 247053348 - NM_001323343 AHCTF1 1 0.55 0.39 21 1.67 78.45 24 4.64 No 34 0.6 No 0 0 No -24 0.59 No 24 39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 247069713 - NM_001323343 AHCTF1 1 0.23 0.18 9 9.45 88.27 29 5.48 No 21 1.16 Yes 0 0 No -24 0.59 No 46 76.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 247081624 - NM_001323343 AHCTF1 1 0.74 0.21 13 8.22 84.91 26 5.39 No 70 1.1 Yes 0 0 No -25 0.77 Yes 45 80.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 32873318 - NM_000687 AHCY 1 0.84 4.38 70 6.87 83.17 18 4.67 No 5 1.5 Yes 0 0 No -21 0.49 No 46 77.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 32878274 - NM_000687 AHCY 1 0.07 0.28 17 -1.28 0 15 6 Yes 2 0.58 No 32 0.84 Yes -31 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 32880312 - NM_000687 AHCY 1 0.02 0.1 7 -15.26 0 23 6.08 Yes 10 1.59 Yes 0 0 No -22 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 32880360 - NM_000687 AHCY 1 0.39 1.42 52 2.7 79.59 21 5 No 66 -2.97 No 0 0 No -22 0.65 No 52 37.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 110554756 + NM_001242675 AHCYL1 1 0.09 0.13 8 8.36 86.23 19 5.04 No 36 1.81 Yes 0 0 No -25 0.72 Yes 45 71.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 110554907 + NM_001242675 AHCYL1 1 0.17 0.25 15 8.16 79.98 36 5.77 Yes 23 0.27 No 0 0 No -36 0.81 Yes 34 87.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 110555008 + NM_001242675 AHCYL1 1 0.57 0.86 36 7.83 86.17 30 5.82 Yes 34 0.45 No 29 0.88 Yes -29 0.83 Yes 41 89.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 110561496 + NM_001242675 AHCYL1 1 0.67 1.07 44 7.61 90.08 28 5.2 No 15 1.7 Yes 0 0 No -27 0.78 Yes 43 92.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 110563272 + NM_001242675 AHCYL1 1 0.09 0.17 10 4.56 71.46 32 6.44 Yes 25 0.06 No 0 0 No -26 0.64 No 39 68.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 27871833 - NM_001029882 AHDC1 1 3.13 0.38 22 6.92 80.73 40 7.11 Yes 13 0.33 No 0 0 No -25 0.82 Yes 45 72.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 27884880 - NM_001029882 AHDC1 1 1.23 0.19 10 3.29 76.55 11 4.95 No -2 0.72 No 0 0 No -24 0.45 No 45 48.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 27917171 - NM_001029882 AHDC1 1 7.78 1.22 49 6.1 79.01 24 6.66 Yes -1 1.77 Yes 0 0 No -24 0.66 No 46 78.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 135667935 - NM_001134831 AHI1 1 5.56 0.44 24 5.58 68.84 28 6.36 Yes 58 -4.52 No 0 0 No -25 0.71 Yes 45 51.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 135709172 - NM_001134831 AHI1 1 13.78 1.21 42 4.44 89.06 23 4.79 No 65 0.48 No 22 0.83 Yes -22 0.95 Yes 48 91.34 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 135726995 - NM_001134831 AHI1 1 2.2 0.29 18 -0.27 81.99 62 8.25 Yes 71 1.83 Yes 0 0 No -61 0.59 No 12 47.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 135768263 - NM_001134831 AHI1 1 3.19 0.51 26 5.3 84.94 24 5.12 No 11 1.04 Yes 0 0 No -23 0.92 Yes 47 91.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62303760 - NM_001620 AHNAK 1 0.62 0.35 14 -3.49 0 21 4.47 No 70 -1.11 No 35 0.16 Yes -35 0.48 No 35 73.26 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 17382550 + NM_001621 AHR 1 0.29 0.29 15 5.43 0 9 3.87 No 64 1.04 Yes 0 0 No -26 0.71 Yes 44 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 346037 + NM_001242412 AHRR 1 0.54 0.35 22 5.02 85.57 22 5 No 52 0.38 No 0 0 No -22 0.54 No 48 74.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 346671 + NM_001242412 AHRR 1 1.65 1.11 41 1.83 66.83 63 8.06 Yes 50 0.78 Yes 0 0 No -31 0.76 Yes 39 56.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 346855 + NM_001242412 AHRR 1 1.3 0.75 30 2.18 71.77 29 5.83 Yes 26 1.14 Yes 0 0 No -31 0.42 No 39 47.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 355688 + NM_001242412 AHRR 1 2.71 1.18 44 9.73 88.8 18 5.39 No 41 1.7 Yes 0 0 No -17 0.38 No 53 62.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 356555 + NM_001242412 AHRR 1 0.44 0.19 13 6.31 87.06 32 6.16 Yes 49 0.01 No 0 0 No -25 0.41 No 41 71.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 360972 + NM_001242412 AHRR 1 6.2 2.89 67 5.01 78.93 30 5.83 Yes 17 0.86 Yes 0 0 No -29 0.81 Yes 41 50.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 367866 + NM_001242412 AHRR 1 2.04 0.86 38 7.93 78.48 34 6.39 Yes 21 2.3 Yes 0 0 No -33 0.81 Yes 37 93.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 367922 + NM_001242412 AHRR 1 9.78 4.44 72 7.46 85.67 51 8.03 Yes 38 1.21 Yes 24 0.08 Yes -51 0.75 Yes 19 83.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 367927 + NM_001242412 AHRR 1 1.87 0.74 29 -0.01 0 56 8.34 Yes 43 1.19 Yes 0 0 No -56 0.76 Yes 15 77.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 372616 + NM_001242412 AHRR 1 0.6 0.32 17 8.76 85.35 19 8.72 Yes 6 0.59 No 0 0 No -18 0.79 Yes 52 78.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 376559 + NM_001242412 AHRR 1 0.22 0.11 8 6.33 85.53 31 6.08 Yes 36 1.2 Yes 0 0 No -30 0.94 Yes 40 97.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 385314 + NM_001242412 AHRR 1 0.23 0.11 7 4.24 0 43 7.22 Yes 30 1.78 Yes 0 0 No -27 0.92 Yes 43 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 396723 + NM_001242412 AHRR 1 0.31 0.18 10 9.23 71.93 32 5.88 Yes 65 1.06 Yes 0 0 No -31 0.77 Yes 39 86.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 399719 + NM_001242412 AHRR 1 7.48 4.39 70 9.51 87.87 26 5.88 Yes 13 1.98 Yes 0 0 No -25 0.97 Yes 45 96.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 404108 + NM_001242412 AHRR 1 0.3 0.21 9 9.67 90.33 31 8.37 Yes 18 2.27 Yes 0 0 No -30 0.8 Yes 40 88.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 411765 + NM_001242412 AHRR 1 0.87 0.44 24 8.99 92.55 17 6.29 Yes 4 0.49 No 0 0 No -28 0.72 Yes 42 75.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 416000 + NM_001242412 AHRR 1 1.14 0.54 22 10.88 90.08 16 4.53 No 47 0.52 No 0 0 No -31 0.54 No 42 50.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 418522 + NM_001242412 AHRR 1 1.66 1.11 46 7.54 75.82 34 5.82 Yes 28 0.58 No 0 0 No -33 0.67 Yes 37 41.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 418808 + NM_001242412 AHRR 1 4.9 2.85 61 4.87 80.93 24 5 No 55 -3.65 No 0 0 No -23 0.94 Yes 47 96.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 420143 + NM_001242412 AHRR 1 5.55 3.64 69 4.21 79.71 27 7.34 Yes 6 1.02 Yes 0 0 No -26 0.67 Yes 52 55.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 425756 + NM_001242412 AHRR 1 7.78 2.33 61 8.5 86.07 22 7.07 Yes 69 0.74 No 0 0 No -21 0.84 Yes 49 79.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 425942 + NM_001242412 AHRR 1 1.24 0.36 21 6.74 82.03 36 7.76 Yes 23 1.44 Yes 0 0 No -35 0.86 Yes 35 83.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 427751 + NM_001242412 AHRR 1 4.01 1.25 45 6.57 82.58 28 5.31 No 70 -4.62 No 23 0.75 Yes -23 0.85 Yes 47 48.04 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 428370 + NM_001242412 AHRR 1 0.68 0.32 18 5.93 87.37 84 9.62 Yes 4 1.03 Yes 0 0 No -23 0.86 Yes 47 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 430301 + NM_001242412 AHRR 1 1.06 0.5 27 3.54 72.17 32 4.82 No 47 0.77 Yes 0 0 No -25 0.69 Yes 45 67.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 430321 + NM_001242412 AHRR 1 4.69 2.29 66 9.25 84.7 16 5.33 No 67 0.78 Yes 0 0 No -27 0.37 No 39 39.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 77931908 + NM_012111 AHSA1 1 0.02 0.19 11 3.3 73.94 24 5.48 No 11 1.16 Yes 31 0.8 Yes -23 0.71 Yes 47 80.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 77934776 + NM_012111 AHSA1 1 0.02 0.17 8 -0.93 0 21 4.58 No 69 -5.13 No 19 0.79 Yes -19 0.91 Yes 51 86.84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 77934932 + NM_012111 AHSA1 1 2.93 23.65 72 7.96 88.17 29 7.55 Yes 16 1.1 Yes 29 0.78 Yes -29 0.87 Yes 41 90.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 61410681 + NM_001321305 AHSA2 1 17.66 11.65 72 9.06 88.48 42 6.42 Yes -4 0.35 No 34 0.07 Yes -34 0.34 No 36 44.11 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 61412973 + NM_001321305 AHSA2 1 0.36 0.14 9 9.16 89.87 17 3.75 No 4 0.62 No 22 0.78 Yes -20 0.83 Yes 50 88.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 61413114 + NM_001321305 AHSA2 1 1.4 0.6 27 3.7 77.74 20 6.48 Yes 7 0.98 Yes 28 0.56 Yes -23 0.62 No 51 47.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 8760326 - NM_001330343 AICDA 1 0.36 0.33 20 -10.15 81.52 27 5.57 Yes 14 0.33 No 0 0 No -26 0.88 Yes 44 95.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 222843587 - NM_022831 AIDA 1 0.14 0.22 14 0.02 0 16 3.87 No 62 -3.39 No 0 0 No -30 0.87 Yes 40 85.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 222859123 - NM_022831 AIDA 1 0.12 0.14 10 11.34 84.17 34 7.11 Yes 21 0.73 No 0 0 No -33 0.72 Yes 37 78.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 222860376 - NM_022831 AIDA 1 0.35 0.5 24 1.55 78.27 20 6.45 Yes 52 -1 No 0 0 No -37 0.82 Yes 33 87.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 222860411 - NM_022831 AIDA 1 1.13 1.4 52 0.02 0 11 4.12 No 17 -1.7 No 34 0.52 Yes -22 0.92 Yes 48 81.77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 222867177 - NM_022831 AIDA 1 0.16 0.18 12 -0.43 0 17 4.18 No 18 0.49 No 0 0 No -30 0.47 No 40 57.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 222884888 - NM_022831 AIDA 1 0.54 0.31 17 3.19 82.31 50 6.84 Yes 49 0.57 No 35 0.12 Yes -41 0.49 No 35 67.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 129263632 - NR_132647 AIFM1 1 0.06 0.14 8 -11.08 0 15 4.12 No 53 -0.8 No 22 0.76 Yes -45 0.24 No 62 25.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 129264078 - NR_132647 AIFM1 1 0.32 0.75 34 2.87 84.85 15 5.08 No 2 0.23 No 0 0 No -21 0.85 Yes 49 92.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 129281911 - NR_132647 AIFM1 1 0.13 0.29 18 5.91 91.96 16 5.2 No 3 0.46 No 28 0.48 Yes -21 0.66 No 49 72.13 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 71879564 - NM_032797 AIFM2 1 0.08 0.15 10 4.27 81.35 21 4.33 No 8 0.47 No 0 0 No -20 0.9 Yes 50 81.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 71883857 - NM_032797 AIFM2 1 32.68 11.29 72 8.09 88.42 31 6.29 Yes 18 1.91 Yes 28 0.88 Yes -30 0.66 Yes 40 72.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 71886162 - NM_032797 AIFM2 1 0.43 0.15 11 6.57 83.16 17 5.62 Yes 4 0.95 Yes 0 0 No -25 0.85 Yes 45 90.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 71888719 - NM_032797 AIFM2 1 2.63 0.88 40 2.53 0 35 8.18 Yes 22 2.24 Yes 0 0 No -34 0.74 Yes 36 86.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 71889773 - NM_032797 AIFM2 1 0.32 0.13 8 6.53 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.8 Yes 51 91.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 143382350 + NM_001286587 AIG1 1 25.49 12.78 72 8.62 79.92 26 6.24 Yes NA NA NA 25 0.67 Yes -29 0.68 Yes 41 70.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 143417065 + NM_001286587 AIG1 1 0.59 0.29 17 4.74 84.41 45 4.99 No 29 0.95 Yes 0 0 No -30 0.85 Yes 40 91.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 143486629 + NM_001286587 AIG1 1 0.41 0.22 11 4.24 76.38 42 4.81 No 4 0.09 No 0 0 No -25 0.2 No 44 48.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 143507806 + NM_001286587 AIG1 1 0.13 0.13 8 7.44 85.1 38 9.74 Yes 59 1.57 Yes 37 0.78 Yes -37 0.9 Yes 33 94.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 143508524 + NM_001286587 AIG1 1 2.28 1.54 47 8.5 87.87 22 7.45 Yes 9 0.76 No 21 0.83 Yes -21 0.9 Yes 49 92.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 143508765 + NM_001286587 AIG1 1 20.94 14.15 72 10.09 91.3 29 5.71 Yes 58 -3.45 No 28 0.61 Yes -28 0.5 No 42 64.59 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 143609197 + NM_001286587 AIG1 1 0.43 0.14 8 9.17 79.77 30 5.75 Yes -3 0.89 Yes 0 0 No -29 0.87 Yes 41 90.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 143655214 + NM_001286587 AIG1 1 1.1 0.83 38 6.76 82.18 41 7.83 Yes 28 1.22 Yes 28 0.8 Yes -28 0.7 Yes 30 57.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 143656187 + NM_001286587 AIG1 1 1.73 1.47 46 7.76 68.01 25 4.74 No 12 1.78 Yes 24 0.94 Yes -28 0.69 Yes 42 72.99 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 143659114 + NM_001286587 AIG1 1 0.19 0.17 11 9.45 84.44 23 5.26 No 10 1.31 Yes 0 0 No -33 0.84 Yes 37 79.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 106973009 + NM_001624 AIM1 1 0.03 0.1 7 -11.49 0 37 6.6 Yes 24 0.77 Yes 0 0 No -36 0.4 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 107001345 + NM_001624 AIM1 1 0.13 0.39 21 5.14 88.42 13 4.97 No 0 0.82 Yes 0 0 No -47 0.32 No 50 38.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 107009219 + NM_001624 AIM1 1 0.22 0.42 21 0.9 77.47 31 7.2 Yes 61 1.22 Yes 0 0 No -28 0.53 No 40 64.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 107014559 + NM_001624 AIM1 1 0.05 0.14 8 4.55 90.66 17 6.1 Yes 4 0.78 Yes 0 0 No -32 0.71 Yes 38 58.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 159043080 - NM_004833 AIM2 1 0.54 0.4 24 7.3 90.58 25 5.06 No 12 0.61 No 26 0.84 Yes -24 0.64 No 46 75.38 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 159043178 - NM_004833 AIM2 1 2.57 1.74 52 4.96 83.08 24 4.73 No 45 0.22 No 0 0 No -23 0.75 Yes 47 75.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 159044081 - NM_004833 AIM2 1 0.72 0.4 22 5.22 84.57 24 6.66 Yes 73 0.32 No 0 0 No -23 0.43 No 47 42.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 159044333 - NM_004833 AIM2 1 0.6 0.44 27 -1.39 64.24 71 7.04 Yes 58 0.73 No 0 0 No -20 0.64 No 26 37.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 107241904 + NM_001142416 AIMP1 1 0.11 0.15 9 -10.21 0 18 3.62 No 13 0.43 No 0 0 No -12 0.49 No 40 25.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 107242022 + NM_001142416 AIMP1 1 1.83 2.22 62 4.44 83.64 35 7.52 Yes 3 1.45 Yes 0 0 No -34 0.78 Yes 36 84.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67256647 + NM_001302959 AIP 1 0.05 0.13 8 9.77 86.7 30 6.56 Yes 62 0.41 No 0 0 No -29 0.93 Yes 41 93.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 33487063 - NM_001319143 AK2 1 4320.41 747.75 72 7.31 87.57 26 5.6 Yes 55 0.56 No 25 0.91 Yes -25 0.89 Yes 45 95.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 33487063 - NM_001319143 AK2 1 1.52 0.29 16 7.31 87.57 26 5.6 Yes 55 0.56 No 25 0.91 Yes -25 0.89 Yes 45 95.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 33487063 - NM_001319143 AK2 1 0.61 0.15 8 7.31 87.57 26 5.6 Yes 55 0.56 No 25 0.91 Yes -25 0.89 Yes 45 95.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 33497263 - NM_001319143 AK2 1 0.97 5.07 70 10.24 86.05 31 5.83 Yes 18 1.2 Yes 30 0.76 Yes -30 0.69 Yes 46 63.96 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 4722260 - NM_001199853 AK3 1 0.12 0.19 10 5.03 76.25 29 5.48 No 16 1.45 Yes 0 0 No -28 0.78 Yes 42 89.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 65661591 + NM_001330616 AK4 1 0.14 0.17 9 10.97 87.87 27 5.81 Yes 66 -3.98 No 0 0 No -26 0.64 No 44 80.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 68662553 - NM_016283 AK6 1 0.1 0.38 19 3.62 91.63 23 5.1 No 10 0.71 No 0 0 No -22 0.85 Yes 48 95.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 68663819 - NM_016283 AK6 1 0.05 0.19 11 2.23 0 45 6.93 Yes 37 0.79 Yes 0 0 No -49 0.61 No 27 50.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68664815 - NM_016283 AK6 1 0.11 0.36 22 1.84 66.33 32 7.44 Yes 62 0.82 Yes 0 0 No -31 0.6 No 39 77.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 55185306 + NM_001242902 AKAP1 1 1.48 0.79 33 9.06 90.48 22 5.29 No 9 1.14 Yes 21 0.91 Yes -21 0.94 Yes 49 94.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 55189165 + NM_001242902 AKAP1 1 0.17 0.14 8 -5.05 0 15 4 No 26 1.83 Yes 0 0 No -38 0.64 No 32 87.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 55194248 + NM_001242902 AKAP1 1 0.24 0.24 13 9.11 88.14 24 6.08 Yes 11 1.85 Yes 0 0 No -23 0.85 Yes 47 90.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55198639 + NM_001242902 AKAP1 1 0.28 0.17 10 9.26 84.35 32 5.65 Yes 0 0.66 No 31 0.69 Yes -31 0.81 Yes 39 74.62 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 19812609 - NM_007202 AKAP10 1 0.32 0.17 11 2.84 73.12 22 5.66 Yes 2 1.37 Yes 24 0.91 Yes -21 0.85 Yes 49 78.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 19822989 - NM_007202 AKAP10 1 6.38 3.24 68 4.19 0 41 6.89 Yes 28 0.71 No 0 0 No -44 0.58 No 26 45.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 19826705 - NM_007202 AKAP10 1 0.85 0.36 22 6.36 0 21 4.58 No 8 0.72 No 0 0 No -20 0.78 Yes 50 91.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 19834440 - NM_007202 AKAP10 1 1.75 0.9 39 4.03 0 40 6.21 Yes 27 0.17 No 0 0 No -32 0.93 Yes 38 95.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 19834444 - NM_007202 AKAP10 1 1.27 0.67 34 0.44 82.44 36 5.89 Yes 23 0.18 No 0 0 No -28 0.93 Yes 42 95.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 19839187 - NM_007202 AKAP10 1 0.72 0.17 9 7.78 72.36 55 6.41 Yes 24 0.82 Yes 0 0 No -30 0.92 Yes 40 94.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 19850813 - NM_007202 AKAP10 1 0.22 0.18 11 0.09 0 16 3.5 No 75 1 Yes 24 0.43 Yes -28 0.69 Yes 42 75.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 19861881 - NM_007202 AKAP10 1 2.39 1.32 48 2.89 0 28 7.77 Yes 15 1.79 Yes 23 0.89 Yes -27 0.62 No 43 86.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 19866273 - NM_007202 AKAP10 1 0.24 0.11 7 -1.66 0 14 4 No 73 0.48 No 0 0 No -27 0.8 Yes 43 49.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 19866280 - NM_007202 AKAP10 1 0.41 0.18 10 -4.58 74.85 21 5.81 Yes 66 0.48 No 20 0.52 Yes -20 0.74 Yes 50 54.61 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 19866305 - NM_007202 AKAP10 1 3.59 1.54 53 -1.98 57.62 36 5.94 Yes 41 0.49 No 27 0.68 Yes -27 0.8 Yes 37 48.05 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 19871348 - NM_007202 AKAP10 1 0.96 0.4 23 6.67 83.82 19 7.07 Yes 6 1.26 Yes 18 0.71 Yes -18 0.72 Yes 52 84.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 42850566 + NM_016248 AKAP11 1 0.54 0.39 19 6.97 86.24 19 5.48 No 6 1.1 Yes 0 0 No -18 0.62 No 52 73.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 42859364 + NM_016248 AKAP11 1 0.72 0.56 27 11.96 94.25 35 4.81 No 22 1.06 Yes 0 0 No -26 0.79 Yes 44 81.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42865409 + NM_016248 AKAP11 1 0.13 0.25 13 4.08 83.86 33 4.05 No 58 0.62 No 0 0 No -23 0.36 No 43 51.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 42866522 + NM_016248 AKAP11 1 0.1 0.15 10 -1.42 72.3 37 6.11 Yes 46 1.3 Yes 0 0 No -40 0.36 No 44 45.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 42869153 + NM_016248 AKAP11 1 0.44 0.76 37 0.44 73.74 22 4.9 No 63 1.04 Yes 0 0 No -21 0.55 No 49 52.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 42869210 + NM_016248 AKAP11 1 1.15 1.89 55 1.84 75.18 17 3.94 No 53 -4.92 No 0 0 No -25 0.83 Yes 45 66.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 42871214 + NM_016248 AKAP11 1 0.3 0.4 22 5.03 82.19 27 5.2 No 68 0.36 No 0 0 No -26 0.87 Yes 44 80.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 42872670 + NM_016248 AKAP11 1 0.05 0.1 7 -9.43 74.16 36 8.33 Yes 74 0.75 No 0 0 No -35 0.67 Yes 35 68.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 42872670 + NM_016248 AKAP11 1 0.3 0.58 23 -9.43 74.16 36 8.33 Yes 74 0.75 No 0 0 No -35 0.67 Yes 35 68.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 85958342 + NM_006738 AKAP13 1 0.32 0.14 9 3.83 76.47 27 4.43 No 4 0.32 No 0 0 No -26 0.55 No 38 52.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 86030510 + NM_006738 AKAP13 1 5.46 2.29 54 -0.67 63.78 74 8.59 Yes 61 0.33 No 0 0 No -41 0.34 No 29 80.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 86069515 + NM_006738 AKAP13 1 0.9 0.5 24 2.15 0 57 7.78 Yes 51 0.82 Yes 0 0 No -57 0.53 No 14 63.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 86094615 + NM_006738 AKAP13 1 0.56 0.25 14 9.17 84.33 22 5.88 Yes 9 1.12 Yes 0 0 No -21 0.58 No 49 61.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 86120993 + NM_006738 AKAP13 1 2.83 2.69 67 7.44 76.05 40 6.37 Yes 1 1.01 Yes 0 0 No -39 0.7 Yes 31 61.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 86146508 + NM_006738 AKAP13 1 0.28 0.31 17 7.76 85.75 30 6.48 Yes 72 0.43 No 0 0 No -29 0.76 Yes 41 70.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 86196501 + NM_006738 AKAP13 1 0.12 0.11 7 10.01 97.67 24 6.81 Yes 11 1.41 Yes 0 0 No -23 0.61 No 47 86.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 86198758 + NM_006738 AKAP13 1 0.21 0.18 12 10.14 87.99 18 5.01 No 5 1.3 Yes 0 0 No -26 0.96 Yes 44 96.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 86217434 + NM_006738 AKAP13 1 0.1 0.11 8 9.05 86.96 44 6.62 Yes 31 0.61 No 0 0 No -33 0.48 No 37 70.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 86220206 + NM_006738 AKAP13 1 0.79 0.81 37 6.52 80.2 27 6.3 Yes 14 1.76 Yes 0 0 No -26 0.86 Yes 44 91.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 86228007 + NM_006738 AKAP13 1 0.59 0.53 22 5.62 74.18 33 5.59 Yes 4 0.36 No 0 0 No -32 0.37 No 38 40.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 86251479 + NM_006738 AKAP13 1 0.12 0.31 15 5.82 82.73 22 5.65 Yes 9 0.43 No 0 0 No -26 0.6 No 45 76.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 86251986 + NM_006738 AKAP13 1 0.09 0.21 13 4.26 80.11 26 5.63 Yes 13 0.8 Yes 0 0 No -25 0.65 No 44 80.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 86253812 + NM_006738 AKAP13 1 7.07 16.81 72 7.92 88.97 21 6.74 Yes 72 1.33 Yes 26 0.75 Yes -20 0.65 No 50 83.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 86261240 + NM_006738 AKAP13 1 15.07 16.21 72 -15.82 56.43 34 5.83 Yes 15 1.08 Yes 24 0.91 Yes -27 0.71 Yes 43 66.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 86261243 + NM_006738 AKAP13 1 85.72 92.36 72 -5.65 0 9 3.87 No 18 1.07 Yes 24 0.91 Yes -30 0.63 No 40 61.13 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 86262308 + NM_006738 AKAP13 1 0.09 0.17 10 -1.95 75.58 29 6.63 Yes 16 2.18 Yes 0 0 No -28 0.86 Yes 42 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 86265441 + NM_006738 AKAP13 1 0.07 0.18 11 7.73 80.95 32 5.74 Yes 19 0.15 No 23 0.96 Yes -28 0.36 No 44 63.73 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 86265463 + NM_006738 AKAP13 1 0.32 0.74 31 -2.61 71.18 27 5.57 Yes 14 1.13 Yes 0 0 No -26 0.94 Yes 44 98.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 86273722 + NM_006738 AKAP13 1 2.16 4.06 71 3.38 70.42 20 5.02 No 27 0.12 No 25 0.8 Yes -26 0.34 No 44 39.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 86283455 + NM_006738 AKAP13 1 8.38 12 72 5.03 87.21 36 6.9 Yes 23 1.17 Yes 0 0 No -30 0.53 No 40 53.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 86286529 + NM_006738 AKAP13 1 0.23 0.35 18 5.32 72.07 28 5.61 Yes 0 0.65 No 0 0 No -27 0.75 Yes 43 56.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 86287195 + NM_006738 AKAP13 1 0.23 0.33 19 6.98 84.23 30 5.72 Yes 17 0.11 No 0 0 No -29 0.82 Yes 41 74.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 15479988 - NM_005858 AKAP8 1 0.18 0.1 7 -11.88 0 15 3.87 No 55 0.76 No 0 0 No -14 0.54 No 56 36.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 15480036 - NM_005858 AKAP8 1 10.06 5.68 72 8.11 87.32 20 4.53 No 7 0.76 No 30 0.72 Yes -30 0.51 No 40 64.92 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 15492861 - NM_014371 AKAP8L 1 0.25 0.29 19 10.02 89.37 9 5.66 Yes 67 0.71 No 27 0.48 Yes -27 0.48 No 43 75.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 15504708 - NM_014371 AKAP8L 1 0.16 0.18 12 2.87 0 30 6.63 Yes 17 2.16 Yes 0 0 No -29 0.8 Yes 41 86.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 15508015 - NM_014371 AKAP8L 1 0.78 0.76 39 8.24 85.11 21 4.52 No 42 -1.94 No 0 0 No -28 0.74 Yes 42 76.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 15508132 - NM_014371 AKAP8L 1 0.49 0.49 24 5.93 74.91 49 7 Yes 66 -2.21 No 21 0.86 Yes -20 0.55 No 50 60.24 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 15509515 - NM_014371 AKAP8L 1 1.04 0.94 39 3.57 77.42 31 6.08 Yes 18 0.79 Yes 30 0.85 Yes -30 0.92 Yes 40 94.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 15509543 - NM_014371 AKAP8L 1 0.25 0.24 16 6.04 81.91 38 6.63 Yes 62 1.24 Yes 30 0.85 Yes -26 0.4 No 44 58.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 15509578 - NM_014371 AKAP8L 1 8.91 7.93 72 10.57 89.54 32 6.73 Yes 27 1.24 Yes 31 0.74 Yes -31 0.86 Yes 39 95.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 15510703 - NM_014371 AKAP8L 1 0.18 0.15 8 6.03 74.78 32 6.71 Yes 59 -1.28 No 0 0 No -31 0.93 Yes 39 79.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 15514367 - NM_014371 AKAP8L 1 0.52 0.81 35 5.57 88.14 17 5.48 No 72 -3.8 No 23 0.67 Yes -23 0.57 No 47 66.85 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 15518941 - NM_014371 AKAP8L 1 0.14 0.19 11 6.23 85.02 28 5.57 Yes 52 1.08 Yes 0 0 No -24 0.82 Yes 49 74.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 91599786 + NM_147185 AKAP9 1 2.12 0.85 38 11.02 95.65 24 4.99 No 11 0.3 No 23 0.88 Yes -23 0.9 Yes 47 95.43 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 91608749 + NM_147185 AKAP9 1 1.84 0.78 39 10.33 92.05 21 4.89 No 11 1.02 Yes 0 0 No -23 0.96 Yes 47 95.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 91610186 + NM_147185 AKAP9 1 1.65 0.81 39 10.81 85.95 30 5.08 No 29 0.55 No 0 0 No -29 0.85 Yes 41 87.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 91625701 + NM_147185 AKAP9 1 0.33 0.15 10 7.82 86.92 13 5.83 Yes 23 0.75 No 0 0 No -35 0.81 Yes 35 70.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 91635491 + NM_147185 AKAP9 1 0.25 0.17 10 3.52 0 36 7.2 Yes 23 1.74 Yes 0 0 No -35 0.88 Yes 35 92.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 91641814 + NM_147185 AKAP9 1 1.58 1.15 43 2.13 75.36 44 7.47 Yes -1 0.11 No 0 0 No -39 0.38 No 27 61.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 91655693 + NM_147185 AKAP9 1 0.2 0.15 9 -0.45 76.61 79 9.17 Yes 66 1.28 Yes 0 0 No -22 0.49 No 48 24.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 91672595 + NM_147185 AKAP9 1 0.65 0.49 28 6.57 81.26 80 11.75 Yes 2 2.3 Yes 0 0 No -40 0.52 No 36 65.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 91679592 + NM_147185 AKAP9 1 0.22 0.11 8 7.27 83.82 49 7.67 Yes 19 1.12 Yes 0 0 No -31 0.63 No 39 66.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 91682045 + NM_147185 AKAP9 1 1.03 0.56 32 1.7 0 14 3.87 No 66 0.67 No 0 0 No -32 0.48 No 34 55.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 91715137 + NM_147185 AKAP9 1 0.47 0.22 12 0.92 69 82 7.23 Yes 22 0.33 No 0 0 No -34 0.51 No 41 57.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 91722433 + NM_147185 AKAP9 1 0.78 0.31 15 0.74 69.46 9 5.66 Yes 27 0.49 No 0 0 No -39 0.71 Yes 31 34.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 91732000 + NM_147185 AKAP9 1 0.14 0.1 7 6.7 76.87 42 6.48 Yes 74 -2.66 No 29 0.36 Yes -41 0.58 No 41 61.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 91736585 + NM_147185 AKAP9 1 0.22 0.14 8 7.99 87.49 31 5.67 Yes 41 0.67 No 26 0.88 Yes -31 0.7 Yes 40 76.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 88385709 - NM_018064 AKIRIN2 1 0.04 0.1 7 8.88 92.4 23 5.22 No 34 0.32 No 0 0 No -22 0.59 No 48 54.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 88410402 - NM_018064 AKIRIN2 1 0.15 0.19 11 0.93 67.4 46 6.63 Yes 33 0.27 No 0 0 No -32 0.69 Yes 38 69.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 88410562 - NM_018064 AKIRIN2 1 0.17 0.19 13 5.49 94.08 25 4.89 No 12 0.67 No 0 0 No -24 0.82 Yes 46 86.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 117100038 - NM_001317950 AKNA 1 0.81 1.35 45 7.04 87.58 26 5.76 Yes 6 0.61 No 0 0 No -25 0.93 Yes 45 81.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 117104010 - NM_001317950 AKNA 1 0.23 0.44 24 2.43 0 33 6.12 Yes 20 0.17 No 36 0.66 Yes -32 0.84 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 117106648 - NM_001317950 AKNA 1 0.28 0.6 28 5.91 91.23 26 6.32 Yes 13 0.55 No 0 0 No -28 0.61 No 42 82.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 117107253 - NM_001317950 AKNA 1 0.18 0.33 16 4.26 85.14 20 4.78 No 7 0.08 No 0 0 No -23 0.47 No 47 71.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 117109054 - NM_001317950 AKNA 1 0.08 0.14 8 1.67 0 10 4.47 No 25 1.34 Yes 0 0 No -37 0.41 No 35 47.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 117110177 - NM_001317950 AKNA 1 0.23 0.29 19 0.24 0 45 8 Yes 32 1.8 Yes 0 0 No -44 0.97 Yes 26 97.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 117114800 - NM_001317950 AKNA 1 0.12 0.13 8 4.64 83.52 22 5.74 Yes 52 1.51 Yes 0 0 No -21 0.84 Yes 49 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 117114850 - NM_001317950 AKNA 1 0.36 0.36 18 7.07 88.21 15 5.13 No 2 1.55 Yes 0 0 No -45 0.62 No 25 72.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 117114874 - NM_001317950 AKNA 1 0.18 0.19 11 3.32 84.41 22 5.35 No 5 0.67 No 0 0 No -21 0.8 Yes 49 68.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 117118081 - NM_001317950 AKNA 1 0.09 0.1 7 3.49 78.58 17 5.82 Yes 64 -5.53 No 0 0 No -25 0.93 Yes 45 84.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 117118372 - NM_001317950 AKNA 1 0.36 0.64 38 7.34 80.74 31 5.57 Yes 67 1.75 Yes 0 0 No -30 0.53 No 45 72.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 117118409 - NM_001317950 AKNA 1 0.11 0.18 9 -3.03 0 11 4.12 No 30 1.75 Yes 0 0 No -42 0.83 Yes 18 84.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 117118412 - NM_001317950 AKNA 1 1.59 2.97 65 -0.12 0 40 7.24 Yes 27 1.77 Yes 0 0 No -39 0.81 Yes 21 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 117119247 - NM_001317950 AKNA 1 0.66 0.99 44 -10.41 73.43 25 5.48 No 73 -4.14 No 0 0 No -24 0.55 No 39 53.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 117120493 - NM_001317950 AKNA 1 0.16 0.31 19 -0.03 74.88 14 5.08 No 47 1.39 Yes 0 0 No -21 0.49 No 11 35.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 117121000 - NM_001317950 AKNA 1 0.07 0.13 9 6.79 73.02 38 6.6 Yes 43 0.12 No 0 0 No -38 0.3 No 38 60.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 117129966 - NM_001317950 AKNA 1 0.33 0.24 13 -2.99 0 15 4.58 No 73 0.96 Yes 0 0 No -30 0.9 Yes 40 85.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 117129991 - NM_001317950 AKNA 1 0.31 0.22 12 -1.75 0 13 4.36 No 48 0.97 Yes 18 0.8 Yes -31 0.68 Yes 39 68.14 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 117130530 - NM_001317950 AKNA 1 0.4 0.26 16 7.85 81.79 9 5.39 No 22 -1.06 No 27 0.45 Yes -24 0.78 Yes 46 80.1 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 117131066 - NM_001317950 AKNA 1 0.06 0.13 9 12.54 96.04 56 7.47 Yes 58 1.9 Yes 0 0 No -37 0.48 No 33 60.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 117139811 - NM_001317950 AKNA 1 0.43 0.56 28 2.07 80.8 28 4.21 No 8 0.18 No 0 0 No -27 0.76 Yes 43 90.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 117148230 - NM_001317950 AKNA 1 0.44 0.24 14 8.55 88.69 32 5.62 Yes 37 0.63 No 0 0 No -28 0.38 No 42 46.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46018087 + NM_006066 AKR1A1 1 0.22 0.29 20 -7.93 0 14 3.61 No 59 -4.77 No 22 0.52 Yes -32 0.86 Yes 38 65.9 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 46033654 + NM_006066 AKR1A1 1 0.06 0.18 10 -4.63 0 30 7.35 Yes NA NA NA 0 0 No -29 0.61 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46033678 + NM_006066 AKR1A1 1 0.09 0.28 16 0.34 70.49 15 5.1 No 19 0.49 No 0 0 No -31 0.76 Yes 39 60.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 46033720 + NM_006066 AKR1A1 1 0.3 0.94 41 1.9 68.14 36 7.14 Yes 23 0.53 No 0 0 No -35 0.58 No 35 72.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 46034208 + NM_006066 AKR1A1 1 0.04 0.17 9 -3.39 63.85 17 5.23 No 4 1.12 Yes 0 0 No -27 0.56 No 43 50.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 46034834 + NM_006066 AKR1A1 1 0.04 0.17 10 6.79 73.61 14 5.3 No 1 1.04 Yes 0 0 No -22 0.76 Yes 48 72.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 134133219 - NM_001346142 AKR1B1 1 0.11 0.33 19 4.57 84.41 24 5.47 No 11 0.43 No 0 0 No -23 0.7 Yes 47 60.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 134133803 - NM_001346142 AKR1B1 1 0.09 0.18 12 7.15 84.11 37 6.14 Yes 35 -1.4 No 0 0 No -30 0.6 No 46 57.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 134133888 - NM_001346142 AKR1B1 1 0.25 0.53 29 4.93 78.67 38 8.83 Yes 25 1.58 Yes 37 0.47 Yes -37 0.88 Yes 33 93.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 19630187 - NM_001320979 AKR7A2 1 1.36 1.01 45 5.95 72.69 29 5.37 No 71 1.54 Yes 0 0 No -28 0.84 Yes 42 95.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105237161 - NM_001014431 AKT1 1 0.09 0.22 8 1.75 0 10 3.87 No 38 1.23 Yes 0 0 No -53 0.69 Yes 17 84.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105237167 - NM_001014431 AKT1 1 0.15 0.4 19 0.1 68.78 16 4.69 No 32 1.24 Yes 0 0 No -47 0.72 Yes 23 84.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105238154 - NM_001014431 AKT1 1 0.16 0.35 17 9.08 92.44 30 6 Yes -3 0.37 No 22 0.67 Yes -32 0.8 Yes 48 68.57 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 105238937 - NM_001014431 AKT1 1 0.06 0.13 8 7.49 85.33 28 5.83 Yes 15 0.24 No 0 0 No -27 0.84 Yes 43 85.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 105239331 - NM_001014431 AKT1 1 0.08 0.19 13 9.5 85.07 31 6.48 Yes 18 0.14 No 30 0.49 Yes -30 0.51 No 47 42.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 105239693 - NM_001014431 AKT1 1 0.14 0.38 20 -1.4 65.44 13 5.19 No 35 1.9 Yes 23 0.83 Yes -47 0.73 Yes 23 68.16 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 105241577 - NM_001014431 AKT1 1 0.12 0.19 11 0.72 70.23 23 5.1 No 30 1.35 Yes 20 0.95 Yes -22 0.77 Yes 48 62.55 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 105243100 - NM_001014431 AKT1 1 0.18 0.33 21 -9.64 0 16 3.87 No 52 -2.21 No 0 0 No -29 0.47 No 39 30.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 105244029 - NM_001014431 AKT1 1 0.84 1.53 54 8.62 88.11 23 5.39 No 10 1.33 Yes 35 0.4 Yes -22 0.93 Yes 48 93.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105259058 - NM_001014431 AKT1 1 1.04 0.15 9 0.28 80.24 30 5.47 No 17 1.48 Yes 0 0 No -29 0.74 Yes 41 88.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105260599 - NM_001014431 AKT1 1 4.96 0.51 26 7.5 89.7 22 4.8 No 9 0.47 No 21 0.87 Yes -21 0.83 Yes 49 69.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50374408 - NM_001278159 AKT1S1 1 0.39 0.17 11 7.93 77.42 31 6.89 Yes 68 0.45 No 0 0 No -30 0.6 No 40 69.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 40740479 - NM_001330511 AKT2 1 0.49 1.03 44 5.43 73.51 14 5.64 Yes 53 -4.52 No 27 0.54 Yes -27 0.41 No 52 26.28 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 40741031 - NM_001330511 AKT2 1 0.4 0.94 36 7.98 83.24 17 5.73 Yes 30 1.28 Yes 0 0 No -48 0.47 No 44 56.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 40741375 - NM_001330511 AKT2 1 0.19 0.44 25 4.37 72.35 26 5.66 Yes 54 2.18 Yes 25 0.93 Yes -25 0.89 Yes 45 90.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 40746029 - NM_001330511 AKT2 1 0.24 0.6 36 5.85 77.35 20 4.78 No -4 1.2 Yes 19 0.77 Yes -19 0.59 No 51 71.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 40758299 - NM_001330511 AKT2 1 0.06 0.14 9 4.34 77.92 31 5.77 Yes 64 0.91 Yes 0 0 No -30 0.61 No 40 67.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 40761207 - NM_001330511 AKT2 1 0.13 0.32 16 1.05 78.42 20 4.8 No NA NA NA 24 0.75 Yes -19 0.6 No 51 66.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 243706262 - NM_181690 AKT3 1 0.33 0.1 7 5.36 66.13 21 6.52 Yes 8 1.12 Yes 0 0 No -20 0.65 No 50 36.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 243727690 - NM_181690 AKT3 1 3.78 1.35 48 7.03 80.74 35 8.52 Yes 22 0.86 Yes 0 0 No -34 0.76 Yes 36 72.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 243776337 - NM_181690 AKT3 1 4.05 1.13 48 4.74 84.41 24 12.25 Yes 11 0.5 No 24 0.56 Yes -24 0.17 No 44 34.73 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 243799212 - NM_181690 AKT3 1 0.39 0.19 9 3.37 79 54 7.48 Yes 45 0.87 Yes 0 0 No -28 0.5 No 43 61.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 243801011 - NM_181690 AKT3 1 0.32 0.15 10 3.91 72.34 29 4.99 No 37 0.35 No 0 0 No -24 0.53 No 46 43.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 243823698 - NM_181690 AKT3 1 0.74 0.28 16 3.05 68.79 73 8.59 Yes 18 0.36 No 0 0 No -24 0.62 No 46 52.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 243846613 - NM_181690 AKT3 1 2.64 1.26 53 5.98 74.38 31 5.42 No 60 -3.45 No 0 0 No -30 0.83 Yes 40 82.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 243851028 - NM_181690 AKT3 1 0.27 0.11 7 9.11 95.4 27 6.18 Yes 14 0.33 No 0 0 No -26 0.73 Yes 44 81.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 243905346 - NM_181690 AKT3 1 0.92 0.24 14 7.8 83.88 39 8.98 Yes 59 1.37 Yes 0 0 No -38 0.84 Yes 32 72.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53526435 - NM_001012398 AKTIP 1 136.65 19.78 72 6.35 72.73 33 5.01 No 70 1.11 Yes 24 0.61 Yes -39 0.54 No 31 65.32 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 53528868 - NM_001012398 AKTIP 1 0.32 0.13 8 0.71 71.54 58 7.8 Yes 21 1.77 Yes 33 0.74 Yes -33 0.81 Yes 37 87.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 116151591 - NM_001317745 ALAD 1 0.84 0.28 11 10.42 88.24 34 5.19 No 21 0.5 No 0 0 No -34 0.56 No 36 78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52233236 + NM_000688 ALAS1 1 50.47 14.01 72 6.3 0 17 4.44 No 16 1.24 Yes 27 0.87 Yes -38 0.65 No 32 84.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 52233236 + NM_000688 ALAS1 1 10.1 2.72 64 6.3 0 17 4.44 No 16 1.24 Yes 27 0.87 Yes -38 0.65 No 32 84.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 52236525 + NM_000688 ALAS1 1 0.77 1.63 54 2.08 73.29 34 6.77 Yes 21 1.95 Yes 0 0 No -33 0.8 Yes 37 80.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52248037 + NM_000688 ALAS1 1 0.34 0.53 34 -0.35 78.52 28 8.66 Yes 43 0.05 No 0 0 No -27 0.69 Yes 43 78.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 105146655 + NM_001627 ALCAM 1 0.08 0.11 7 10.02 84.4 42 5.99 Yes 29 1.79 Yes 0 0 No -37 0.76 Yes 33 87.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 105245720 + NM_001627 ALCAM 1 0.56 1.44 50 3.1 64.18 37 4.11 No 32 0.89 Yes 0 0 No -32 0.62 No 38 70.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 105264032 + NM_001627 ALCAM 1 0.08 0.21 12 8.38 85.32 53 7.29 Yes 5 0.88 Yes 42 0.41 Yes -28 0.4 No 42 27.32 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 105278242 + NM_001627 ALCAM 1 0.22 0.42 19 7.42 89.33 32 13.78 Yes 50 -3.55 No 0 0 No -32 0.56 No 38 48.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 105293322 + NM_001627 ALCAM 1 0.05 0.15 9 -2.04 80.27 25 5.46 No 12 0.91 Yes 0 0 No -29 0.75 Yes 41 84.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49958907 + NM_153329 ALDH16A1 1 0.24 0.14 7 3.89 75.81 20 5.83 Yes 66 0.51 No 0 0 No -19 0.92 Yes 51 90.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49959830 + NM_153329 ALDH16A1 1 0.24 0.18 10 8.57 87.44 32 7.25 Yes 19 0.81 Yes 0 0 No -31 0.73 Yes 39 60.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 49960072 + NM_153329 ALDH16A1 1 0.54 0.29 15 4.72 84.5 18 5.24 No 61 1.91 Yes 0 0 No -21 0.6 No 49 68.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 49960074 + NM_153329 ALDH16A1 1 2.52 1.47 52 -10.73 73.73 20 5.42 No 63 1.9 Yes 0 0 No -23 0.51 No 47 69.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 49965144 + NM_153329 ALDH16A1 1 1.12 0.53 29 -5.29 0 24 5.38 No 11 -0.54 No 0 0 No -23 0.65 No 47 58.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49969037 + NM_153329 ALDH16A1 1 0.95 0.56 28 4.15 77.52 30 4.79 No 50 1.3 Yes 0 0 No -29 0.67 Yes 41 62.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 97370049 - NM_001323419 ALDH18A1 1 0.06 0.13 9 -14.42 0 30 7.87 Yes 17 1.97 Yes 0 0 No -29 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 97371153 - NM_001323419 ALDH18A1 1 0.13 0.39 21 6.6 82.24 38 6.32 Yes -4 1.97 Yes 0 0 No -37 0.79 Yes 33 66.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 38394473 + NM_000692 ALDH1B1 1 1.41 1.38 46 9.52 87.15 19 7.33 Yes 73 0.68 No 0 0 No -18 0.39 No 52 63.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105422244 - NM_001034173 ALDH1L2 1 0.64 0.14 8 6.77 90.14 28 5.34 No 51 -2.88 No 0 0 No -22 0.85 Yes 48 86.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105425669 - NM_001034173 ALDH1L2 1 3.08 0.72 27 5.46 75.62 32 5.23 No 70 0.68 No 31 0.41 Yes -31 0.64 No 39 26.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 105444486 - NM_001034173 ALDH1L2 1 8.43 1.75 52 3.11 84.35 21 5.19 No 76 0.39 No 20 0.65 Yes -20 0.86 Yes 50 84.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 105460444 - NM_001034173 ALDH1L2 1 0.95 0.29 16 -1.87 0 30 5.63 Yes 17 0.89 Yes 25 0.9 Yes -30 0.71 Yes 40 64.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 105464133 - NM_001034173 ALDH1L2 1 4.46 0.68 27 11.3 88.76 33 5.17 No 56 0.45 No 0 0 No -32 0.65 No 38 65.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112213408 + NM_000690 ALDH2 1 0.48 0.31 15 8.66 90.67 29 5.74 Yes 16 0.16 No 28 0.75 Yes -28 0.75 Yes 42 86.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 19556378 + NM_001031806 ALDH3A2 1 0.31 0.21 13 4.39 84.41 31 4.08 No 76 1.74 Yes 0 0 No -28 0.69 Yes 42 83.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 19558591 + NM_001031806 ALDH3A2 1 0.37 0.22 14 6.34 83.43 20 6.71 Yes 65 0.97 Yes 25 0.34 Yes -23 0.68 Yes 51 50.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 19559711 + NM_001031806 ALDH3A2 1 0.22 0.14 9 -1.57 65.07 36 6.02 Yes 6 -2.2 No 27 0.53 Yes -24 0.39 No 46 74.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 19576512 + NM_001031806 ALDH3A2 1 4.27 0.42 24 5.73 77.93 32 5.55 No 1 0.73 No 31 0.58 Yes -31 0.61 No 39 60.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 19578874 + NM_001031806 ALDH3A2 1 7.78 0.43 22 6.63 0 27 5.67 Yes 14 1.23 Yes 22 0.82 Yes -31 0.35 No 39 54.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 19576716 + NM_001031806 ALDH3A2 1 1.66 0.14 7 9.17 92.67 25 8.48 Yes 58 0.73 No 0 0 No -24 0.73 Yes 46 60.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 19207988 - NM_001161504 ALDH4A1 1 1.02 0.29 18 8.66 89.56 19 5.37 No 37 1.36 Yes 0 0 No -26 0.59 No 52 74.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 19209167 - NM_001161504 ALDH4A1 1 7.43 1.36 47 5.91 81.28 24 5.73 Yes 49 1.35 Yes 18 0.58 Yes -23 0.51 No 47 60.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 19209170 - NM_001161504 ALDH4A1 1 1 0.24 14 6.07 86.98 21 5.48 No 46 1.34 Yes 18 0.58 Yes -25 0.45 No 50 53.56 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 24503545 + NM_170740 ALDH5A1 1 0.26 0.11 8 6.9 78.2 19 6 Yes 73 0.44 No 0 0 No -27 0.32 No 41 41.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 24503547 + NM_170740 ALDH5A1 1 0.93 0.39 22 -10.76 78.9 21 6.16 Yes 75 0.43 No 0 0 No -20 0.44 No 39 43.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 24523832 + NM_170740 ALDH5A1 1 0.58 0.26 16 4.62 78.64 29 4.88 No 31 1.02 Yes 0 0 No -28 0.5 No 42 69.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 165636455 - NM_000696 ALDH9A1 1 0.08 0.14 8 7.95 79.96 21 5.52 No 8 1 Yes 0 0 No -25 0.52 No 45 60.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 165649851 - NM_000696 ALDH9A1 1 0.09 0.14 7 2.05 71.54 68 8.58 Yes 40 0.79 Yes 0 0 No -38 0.63 No 32 84.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 30081090 + NM_001243177 ALDOA 1 0.02 0.38 23 3.05 72.47 58 7.92 Yes 69 1.23 Yes 0 0 No -27 0.48 No 43 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 30081445 + NM_001243177 ALDOA 1 0.01 0.33 18 -1.75 0 11 4.12 No 19 1.72 Yes 0 0 No -31 0.97 Yes 39 96.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26900977 - NM_005165 ALDOC 1 0.31 0.46 24 -9.78 0 10 4.47 No 61 0.91 Yes 26 0.77 Yes -9 0.72 Yes 61 48.31 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 26903036 - NM_005165 ALDOC 1 1.31 1.75 55 2.46 78.16 18 6.72 Yes 46 1.13 Yes 27 0.65 Yes -34 0.49 No 33 61.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 26903039 - NM_005165 ALDOC 1 12.09 16.32 72 8.68 82.18 15 6.58 Yes 43 1.13 Yes 27 0.65 Yes -31 0.53 No 43 62.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 5125398 + NM_019109 ALG1 1 0.18 0.11 8 1.91 0 13 4.36 No 68 1.07 Yes 19 0.52 Yes -29 0.89 Yes 41 92.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 5132556 + NM_019109 ALG1 1 1.71 1.35 49 3.99 71.92 20 5.92 Yes 7 2.37 Yes 22 0.9 Yes -19 0.85 Yes 51 87.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 38717714 + NM_001013620 ALG10B 1 11.47 4.08 71 4.47 81.52 22 4.8 No 30 1.1 Yes 21 0.89 Yes -21 0.89 Yes 49 91.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 38717854 + NM_001013620 ALG10B 1 1.74 0.6 30 5.03 88.13 40 7.28 Yes 27 0.79 Yes 0 0 No -29 0.8 Yes 41 81.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 38717857 + NM_001013620 ALG10B 1 0.25 0.1 7 -7.14 73.93 43 7.48 Yes 30 0.77 Yes 0 0 No -32 0.79 Yes 38 81.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 52589918 + NM_001004127 ALG11 1 6.53 2.67 61 6.34 90.1 20 6.74 Yes 7 0.74 No 0 0 No -24 0.53 No 46 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 52598721 + NM_001004127 ALG11 1 0.33 0.15 9 4.25 81.13 30 7.28 Yes 17 1.78 Yes 0 0 No -29 0.89 Yes 41 96.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 52596854 + NM_001004127 ALG11 1 0.63 0.33 21 13.03 95.65 30 5.68 Yes 61 1.16 Yes 0 0 No -30 0.84 Yes 40 81.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 52597848 + NM_001004127 ALG11 1 5.09 2.67 65 3.26 83 40 8.23 Yes 32 1.48 Yes 0 0 No -44 0.52 No 31 79.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 52598721 + NM_001004127 ALG11 1 3.58 1.86 56 4.25 81.13 30 7.28 Yes 17 1.78 Yes 0 0 No -29 0.89 Yes 41 96.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50297528 - NM_024105 ALG12 1 0.58 0.22 15 7.87 80.04 34 7.11 Yes 21 1.63 Yes 33 0.85 Yes -33 0.58 No 37 75.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 50298033 - NM_024105 ALG12 1 9.07 3.54 67 6.26 85.37 39 6.67 Yes 40 0.52 No 24 0.32 Yes -38 0.91 Yes 32 94.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50304252 - NM_024105 ALG12 1 0.24 0.11 8 -0.32 0 20 5.14 No 7 0.78 Yes 0 0 No -29 0.82 Yes 41 86.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 110928198 + NM_001257230 ALG13 1 0.09 0.13 7 0.17 0 14 3.01 No 38 1.12 Yes 0 0 No -30 0.6 No 40 64.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 110929364 + NM_001257230 ALG13 1 129.13 7.82 72 7.22 82.59 21 4.28 No 8 0.47 No 20 0.47 Yes -20 0.44 No 50 48.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 110931114 + NM_001257230 ALG13 1 2198.64 125.71 72 11.41 85.24 24 7.6 Yes 11 1.31 Yes 23 0.83 Yes -23 0.5 No 47 74.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 110932314 + NM_001257230 ALG13 1 7.92 0.49 27 8.75 85.26 17 6.07 Yes 4 1.37 Yes 25 0.84 Yes -33 0.73 Yes 37 54.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 110960180 + NM_001257230 ALG13 1 8.19 1.1 45 8.65 84.59 34 5.37 No 21 0.25 No 0 0 No -33 0.45 No 37 60.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 110967485 + NM_001257230 ALG13 1 1 0.19 11 1.03 74.8 34 6 Yes 21 1.33 Yes 0 0 No -33 0.86 Yes 37 96.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 110970045 + NM_001257230 ALG13 1 0.84 0.19 10 -3.36 0 14 4.24 No 62 0.61 No 22 0.36 Yes -37 0.83 Yes 33 92.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 110970583 + NM_001257230 ALG13 1 3.74 0.79 35 6.55 79.29 33 4.31 No 67 0.31 No 0 0 No -26 0.89 Yes 44 83.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 110977595 + NM_001257230 ALG13 1 1.76 0.42 23 5.51 93.92 30 5.65 Yes 71 1.1 Yes 0 0 No -29 0.7 Yes 41 73.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 110978317 + NM_001257230 ALG13 1 3.15 0.79 37 11.44 90.83 20 5.48 No 71 1.31 Yes 0 0 No -19 0.76 Yes 51 93.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 111000860 + NM_001257230 ALG13 1 0.63 0.17 9 6.04 82.42 39 6.29 Yes 70 0.71 No 0 0 No -18 0.33 No 45 61.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 95449190 - NM_001305242 ALG14 1 1.12 0.5 27 5.25 70.18 35 5.72 Yes 22 0.58 No 34 0.7 Yes -39 0.68 Yes 31 91.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 95487924 - NM_001305242 ALG14 1 1.08 0.47 24 4.57 83.63 19 8.46 Yes 6 1.31 Yes 0 0 No -18 0.58 No 52 82.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 183961414 - NM_001006941 ALG3 1 0.28 0.36 19 2.55 0 30 6.32 Yes 9 0.88 Yes 28 0.21 Yes -29 0.62 No 41 76.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 183961668 - NM_001006941 ALG3 1 0.16 0.22 15 0.79 78.42 22 5.66 Yes 44 0.66 No 0 0 No -21 0.57 No 49 70.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 183961670 - NM_001006941 ALG3 1 0.74 1.11 47 4.99 83.37 20 5.48 No 42 0.66 No 0 0 No -25 0.58 No 51 71.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 183962440 - NM_001006941 ALG3 1 0.25 0.43 26 8.01 83.52 23 7.73 Yes 10 0.54 No 0 0 No -22 0.9 Yes 48 78.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 37541945 - NM_013338 ALG5 1 1.59 2.18 62 6.22 74.97 75 6.19 Yes 34 1.09 Yes 25 0.54 Yes -25 0.43 No 24 53.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 37549991 - NM_013338 ALG5 1 0.5 0.56 25 5.24 80.12 20 7.12 Yes NA NA NA 0 0 No -30 0.67 Yes 40 72.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 37557705 - NM_013338 ALG5 1 0.82 0.94 36 8.27 89.4 26 5.48 No 13 1.14 Yes 0 0 No -25 0.77 Yes 45 85.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 37563693 - NM_013338 ALG5 1 1.75 3.14 68 1.88 75.04 26 5.1 No 29 1.05 Yes 25 0.85 Yes -25 0.73 Yes 45 87.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 37563710 - NM_013338 ALG5 1 0.07 0.13 7 -0.66 0 36 5.47 No 12 1.07 Yes 25 0.85 Yes -35 0.58 No 35 76.37 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 63842659 + NM_013339 ALG6 1 0.14 0.1 7 3.72 83.95 31 5.74 Yes 18 0.25 No 0 0 No -26 0.85 Yes 44 90.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63863996 + NM_013339 ALG6 1 0.2 0.11 8 10.49 87.76 33 4.13 No -1 0.94 Yes 0 0 No -36 0.53 No 51 54.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 63876831 + NM_013339 ALG6 1 0.19 0.1 7 -7.51 66.35 28 5.48 No 69 0.52 No 0 0 No -27 0.91 Yes 43 84.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63876925 + NM_013339 ALG6 1 0.83 0.46 22 3.09 69.57 20 4.59 No 22 0.38 No 0 0 No -19 0.82 Yes 51 86.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63877352 + NM_013339 ALG6 1 0.28 0.11 7 9.86 89.15 39 7.99 Yes 26 0.37 No 0 0 No -26 0.91 Yes 44 94.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63879738 + NM_013339 ALG6 1 0.7 0.28 16 -9.52 0 10 3.58 No 11 1.03 Yes 0 0 No -23 0.34 No 47 78.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 63881564 + NM_013339 ALG6 1 1.72 0.99 41 0.97 75.55 31 5.48 No 18 0.91 Yes 0 0 No -30 0.8 Yes 40 88.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 63894620 + NM_013339 ALG6 1 0.14 0.11 7 7.69 83.85 27 5.57 Yes 45 0.65 No 0 0 No -26 0.73 Yes 44 83.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63895186 + NM_013339 ALG6 1 0.4 0.26 16 6.29 92.03 23 5.1 No 53 -2.97 No 23 0.9 Yes -23 0.78 Yes 48 60.15 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 77813995 - NM_024079 ALG8 1 10.98 12.11 72 3.97 84.41 29 8.17 Yes 16 1.15 Yes 28 0.89 Yes -28 0.71 Yes 42 84.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77817959 - NM_024079 ALG8 1 2.3 2.4 61 3.53 73.11 29 6.41 Yes 49 1.48 Yes 28 0.46 Yes -36 0.78 Yes 34 84.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77817959 - NM_024079 ALG8 1 0.62 0.72 35 3.53 73.11 29 6.41 Yes 49 1.48 Yes 28 0.46 Yes -36 0.78 Yes 34 84.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77817972 - NM_024079 ALG8 1 0.13 0.14 9 1.47 0 16 5.34 No 36 1.5 Yes 28 0.46 Yes -23 0.79 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 77818811 - NM_024079 ALG8 1 0.48 0.49 27 6.14 88.68 22 5.74 Yes 9 0.99 Yes 21 0.93 Yes -21 0.91 Yes 49 89.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77820587 - NM_024079 ALG8 1 0.09 0.13 9 2.14 68.97 46 6.26 Yes 18 0.16 No 29 0.21 Yes -30 0.58 No 50 39.1 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 77825845 - NM_024079 ALG8 1 0.17 0.26 15 8.16 87.15 29 6.28 Yes 70 1.72 Yes 28 0.87 Yes -28 0.85 Yes 42 92.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77838486 - NM_024079 ALG8 1 0.55 0.39 19 -5.28 72.38 45 7.29 Yes -1 1.11 Yes 0 0 No -25 0.95 Yes 45 92.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77848692 - NM_024079 ALG8 1 0.45 0.33 20 12.28 87.77 21 5.65 Yes 35 1.96 Yes 23 0.8 Yes -36 0.52 No 47 57.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 111659294 - NM_001077691 ALG9 1 3.63 1.94 55 4.24 85.93 28 6.31 Yes 15 1.04 Yes 27 0.85 Yes -27 0.9 Yes 43 95.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 111667524 - NM_001077691 ALG9 1 0.96 0.49 25 3.91 64.22 52 7.28 Yes 39 0.88 Yes 0 0 No -52 0.39 No 19 85.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 111676040 - NM_001077691 ALG9 1 3.93 1.86 56 4.87 87.46 26 7.37 Yes 56 -3.24 No 26 0.76 Yes -26 0.75 Yes 44 86.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 111709102 - NM_001077691 ALG9 1 233.88 48.22 72 7.27 91 24 5 No 57 1.06 Yes 0 0 No -23 0.75 Yes 47 67.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 111709102 - NM_001077691 ALG9 1 3.17 0.65 31 7.27 91 24 5 No 57 1.06 Yes 0 0 No -23 0.75 Yes 47 67.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 111709118 - NM_001077691 ALG9 1 1.1 0.21 11 1.98 0 94 9.37 Yes 41 1.06 Yes 0 0 No -27 0.66 No 43 54.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 111724636 - NM_001077691 ALG9 1 0.21 0.13 7 4.29 82.28 22 5.62 Yes 9 1.12 Yes 0 0 No -25 0.64 No 45 70.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 111731029 - NM_001077691 ALG9 1 0.36 0.22 14 12.37 93.09 27 5.31 No -2 0.39 No 0 0 No -26 0.53 No 44 57.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 78140290 - NM_006020 ALKBH1 1 0.18 0.11 7 8.38 81.18 18 6.16 Yes 21 -2.63 No 0 0 No -17 0.74 Yes 53 63.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 78142138 - NM_006020 ALKBH1 1 2.9 1.82 62 8.63 84.14 19 7.06 Yes 6 1.81 Yes 18 0.81 Yes -34 0.54 No 36 72.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 78154161 - NM_006020 ALKBH1 1 0.48 0.26 14 10.51 83.64 57 7.47 Yes 44 1.11 Yes 0 0 No -21 0.63 No 21 57.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 78158326 - NM_006020 ALKBH1 1 1.72 0.99 42 6.99 80.11 36 5.96 Yes 65 0.65 No 29 0.79 Yes -29 0.8 Yes 41 91.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 78169484 - NM_006020 ALKBH1 1 0.33 0.18 12 7.18 94.37 18 5.8 Yes 34 0.57 No 0 0 No -23 0.8 Yes 47 81.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 78170565 - NM_006020 ALKBH1 1 0.5 0.28 15 5.51 66.78 39 4.72 No 15 0.06 No 0 0 No -35 0.59 No 35 44.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 43908158 + NM_139178 ALKBH3 1 4.66 2.6 66 6.95 91.57 31 5.83 Yes 18 1.33 Yes 27 0.95 Yes -30 0.91 Yes 40 96.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 102100158 - NM_017621 ALKBH4 1 4.83 0.75 33 9.33 89.75 31 5.56 Yes 18 0.93 Yes 30 0.77 Yes -30 0.79 Yes 40 71.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 18089024 + NM_017758 ALKBH5 1 0.12 0.28 13 8.33 84.77 18 6.08 Yes 50 -1.95 No 0 0 No -30 0.9 Yes 40 87.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 18089072 + NM_017758 ALKBH5 1 0.23 0.56 30 6.94 84.48 29 5.92 Yes 53 -1.16 No 0 0 No -28 0.96 Yes 42 96.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36501586 - NM_198867 ALKBH6 1 566.53 64.18 72 5.02 71.19 23 5.38 No 47 0.11 No 22 0.67 Yes -25 0.54 No 48 62.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 36501586 - NM_198867 ALKBH6 1 13.56 1.53 50 5.02 71.19 23 5.38 No 47 0.11 No 22 0.67 Yes -25 0.54 No 48 62.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 36501606 - NM_198867 ALKBH6 1 2.96 0.38 17 5.09 78.78 40 6.21 Yes 62 1.45 Yes 22 0.67 Yes -39 0.93 Yes 31 95.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36501980 - NM_198867 ALKBH6 1 8.72 6.31 71 4.44 81.93 22 6.86 Yes 9 1.25 Yes 0 0 No -21 0.88 Yes 49 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36501980 - NM_198867 ALKBH6 1 0.2 0.15 9 4.44 81.93 22 6.86 Yes 9 1.25 Yes 0 0 No -21 0.88 Yes 49 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36504468 - NM_198867 ALKBH6 1 0.57 0.17 9 5.34 65.16 19 4.82 No 58 0.64 No 0 0 No -25 0.75 Yes 45 31.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 36504491 - NM_198867 ALKBH6 1 6.11 2.38 62 2.12 59.05 48 7.61 Yes 35 0.63 No 24 0.96 Yes -24 0.44 No 46 71.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 107393305 - NM_138775 ALKBH8 1 0.76 0.19 12 -6.68 0 27 5.36 No 49 0.91 Yes 27 0.34 Yes -26 0.73 Yes 44 33.04 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 107406639 - NM_138775 ALKBH8 1 0.24 0.11 8 7.2 81.31 26 4.31 No 13 0.57 No 0 0 No -25 0.69 Yes 45 83.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 107424700 - NM_138775 ALKBH8 1 6.66 2.39 58 0.06 0 31 6.99 Yes 18 0.8 Yes 25 0.79 Yes -27 0.63 No 40 73.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 73651549 + NM_015120 ALMS1 1 0.5 0.14 8 -0.52 0 32 7.09 Yes 19 0.95 Yes 26 0.68 Yes -31 0.49 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 73659256 + NM_015120 ALMS1 1 3.81 1.15 43 10.11 87.05 29 6.86 Yes 16 0.88 Yes 0 0 No -28 0.73 Yes 42 86.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73682339 + NM_015120 ALMS1 1 2.16 0.75 39 6.15 82.1 22 5.99 Yes 60 0.17 No 0 0 No -26 0.53 No 44 72.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 73820875 + NM_015120 ALMS1 1 1.16 0.21 13 5.5 85.42 24 8.37 Yes 11 0.8 Yes 0 0 No -23 0.78 Yes 47 86.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 45882730 + NM_001256153 ALOX5 1 0.05 0.1 7 6.75 78.68 21 5.57 Yes 8 0.85 Yes 0 0 No -20 0.92 Yes 50 95.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 45898064 + NM_001256153 ALOX5 1 0.17 0.19 10 6.36 92.52 14 4.99 No 1 0.32 No 0 0 No -20 0.62 No 52 78.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 45908073 + NM_001256153 ALOX5 1 0.24 0.32 19 4.4 72.43 25 7.14 Yes 12 1.18 Yes 0 0 No -24 0.93 Yes 46 86.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 45913119 + NM_001256153 ALOX5 1 6.74 9.22 70 6.9 82.77 38 4.8 No 46 0.15 No 0 0 No -37 0.56 No 33 41.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 45919025 + NM_001256153 ALOX5 1 0.09 0.11 7 8.55 85.86 44 6.21 Yes 72 1.43 Yes 0 0 No -43 0.52 No 30 58.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 45920430 + NM_001256153 ALOX5 1 0.42 0.44 23 2.66 77.4 16 5.06 No 3 -1.06 No 0 0 No -23 0.61 No 19 69.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 45921045 + NM_001256153 ALOX5 1 0.16 0.11 7 4.12 78.92 14 4.66 No 1 0.52 No 0 0 No -26 0.41 No 45 75.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 45921098 + NM_001256153 ALOX5 1 0.49 0.42 18 9.21 82.05 40 7.76 Yes -4 1.12 Yes 0 0 No -42 0.64 No 31 72.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 45923119 + NM_001256153 ALOX5 1 0.91 0.49 24 9.46 88.18 22 6.4 Yes 32 2.17 Yes 0 0 No -21 0.86 Yes 49 90.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 45923768 + NM_001256153 ALOX5 1 3.47 2.25 62 6.29 80.46 17 8.15 Yes 4 2.04 Yes 33 0.65 Yes -21 0.83 Yes 49 63.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 45923808 + NM_001256153 ALOX5 1 2.13 1.29 53 7.84 82.18 34 6.99 Yes 44 2.01 Yes 33 0.65 Yes -33 0.89 Yes 37 91.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 45924006 + NM_001256153 ALOX5 1 1.35 0.94 35 8.59 89.6 17 4.3 No 1 0.5 No 0 0 No -23 0.6 No 54 72.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 45925488 + NM_001256153 ALOX5 1 0.11 0.13 7 7.11 83.68 26 5.2 No 60 1.34 Yes 0 0 No -25 0.92 Yes 45 93.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 45935850 + NM_001256153 ALOX5 1 0.16 0.18 10 -4.44 61.82 17 4.69 No 66 -5.76 No 29 0.47 Yes -22 0.46 No 40 21.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 31318954 + NM_001629 ALOX5AP 1 0.09 0.14 8 9.19 91.97 36 8.28 Yes 13 0.22 No 0 0 No -25 0.78 Yes 45 68.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 31320761 + NM_001629 ALOX5AP 1 0.28 0.29 19 6.78 80.49 30 6.63 Yes NA NA NA 0 0 No -23 0.52 No 41 66.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 31326192 + NM_001629 ALOX5AP 1 0.39 0.46 27 0.44 0 49 8.29 Yes 36 1.9 Yes 0 0 No -36 0.81 Yes 34 84.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 113223494 + NM_001253884 ALPK1 1 10.67 1.78 54 3.57 73.29 29 5.38 No 67 -5.27 No 22 0.67 Yes -28 0.37 No 42 70.61 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 113298833 + NM_001253884 ALPK1 1 2 0.11 7 10.85 94.69 30 6.1 Yes 17 0.9 Yes 0 0 No -26 0.6 No 41 81.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 113239659 + NM_001253884 ALPK1 1 2.68 0.15 10 11.2 94.45 22 4.58 No 15 1.3 Yes 0 0 No -21 0.8 Yes 49 93.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 113245654 + NM_001253884 ALPK1 1 7.73 0.38 21 10.36 94.82 73 8.6 Yes 75 0.33 No 0 0 No -31 0.12 No 39 53.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 113245824 + NM_001253884 ALPK1 1 25.7 1.33 44 7.44 85.52 27 6.24 Yes 14 1.5 Yes 0 0 No -26 0.85 Yes 44 90.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 113264167 + NM_001253884 ALPK1 1 21.97 1.15 45 10.77 85.48 36 6 Yes 23 0.77 Yes 29 0.54 Yes -29 0.46 No 41 59.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 113282180 + NM_001253884 ALPK1 1 1.59 0.11 7 4.59 79.17 52 7.63 Yes 27 0.7 No 0 0 No -39 0.48 No 31 63.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 113282272 + NM_001253884 ALPK1 1 4.88 0.26 12 0.23 0 20 4.47 No 7 1.28 Yes 0 0 No -19 0.95 Yes 51 90.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 113298833 + NM_001253884 ALPK1 1 218.84 11.67 72 10.85 94.69 30 6.1 Yes 17 0.9 Yes 0 0 No -26 0.6 No 41 81.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 113335420 + NM_001253884 ALPK1 1 23.18 2.54 64 8.03 80.99 29 5.57 Yes 25 -2.71 No 28 0.92 Yes -28 0.73 Yes 42 82.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 113350286 + NM_001253884 ALPK1 1 1.34 0.26 16 2.78 68.81 50 6.52 Yes 19 0.7 No 20 0.83 Yes -31 0.63 No 39 82.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr18 56187875 - NM_052947 ALPK2 1 1.6 0.17 8 5.5 70.2 32 5.97 Yes 19 0.94 Yes 0 0 No -34 0.73 Yes 36 80.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 56189884 - NM_052947 ALPK2 1 1.83 0.18 13 9.91 90.22 38 6.02 Yes 62 0.68 No 0 0 No -32 0.76 Yes 38 89.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 56195600 - NM_052947 ALPK2 1 2.98 0.22 14 6.91 85.02 21 7 Yes 8 1.32 Yes 0 0 No -20 0.84 Yes 50 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 202569307 - NM_020919 ALS2 1 3.19 0.56 31 3.95 82.78 25 5.38 No 12 0.77 Yes 0 0 No -25 0.81 Yes 45 68.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 202579902 - NM_020919 ALS2 1 5.13 0.6 31 1.85 70.99 43 7 Yes 30 1.31 Yes 0 0 No -42 0.86 Yes 28 96.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 202580560 - NM_020919 ALS2 1 13.19 2.22 64 4.54 84.76 30 4.69 No 1 0.57 No 0 0 No -29 0.82 Yes 41 85.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 202581435 - NM_020919 ALS2 1 0.94 0.14 10 2.96 84.41 28 6.28 Yes 48 1.53 Yes 27 0.77 Yes -27 0.83 Yes 43 81.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 202584852 - NM_020919 ALS2 1 1.39 0.31 15 8.37 85.71 27 6.93 Yes 14 1.18 Yes 26 0.75 Yes -32 0.63 No 44 64.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 202585259 - NM_020919 ALS2 1 0.8 0.17 9 10.07 88.27 31 7.87 Yes 18 1.68 Yes 0 0 No -30 0.95 Yes 40 96.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 202630327 - NM_020919 ALS2 1 1.29 0.33 16 10.56 92 24 6.03 Yes 56 0.8 Yes 27 0.57 Yes -27 0.69 Yes 43 62.33 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 202630551 - NM_020919 ALS2 1 5.27 1.39 48 9.13 99.55 30 6.36 Yes 50 0.58 No 29 0.76 Yes -29 0.41 No 41 73.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 202645215 - NM_020919 ALS2 1 0.72 0.1 7 3.12 66.73 29 5.06 No 16 0.58 No 0 0 No -28 0.9 Yes 42 69.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79846286 - NM_005782 ALYREF 1 1.18 10.97 72 -1.72 0 12 4.24 No 20 0.67 No 0 0 No -32 0.79 Yes 38 77.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79846866 - NM_005782 ALYREF 1 0.53 5.75 72 4.3 71.14 99 10.23 Yes 35 1.26 Yes 24 0.78 Yes -23 0.48 No 43 54.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79847846 - NM_005782 ALYREF 1 0.13 1.43 50 6.38 81.64 26 5.46 No 3 0.79 Yes 25 0.97 Yes -25 0.95 Yes 45 97.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46452638 - NM_017749 AMBRA1 1 0.54 0.29 16 6.9 95.5 25 5 No 30 0.13 No 0 0 No -22 0.83 Yes 48 86.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 46460654 - NM_017749 AMBRA1 1 0.23 0.18 11 8.36 87.82 23 7.32 Yes 10 1.02 Yes 0 0 No -22 0.83 Yes 48 90.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46515773 - NM_017749 AMBRA1 1 0.27 0.19 9 4.13 79.27 17 5.19 No 4 1.41 Yes 26 0.89 Yes -20 0.62 No 50 79.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 46539977 - NM_017749 AMBRA1 1 1.54 0.57 24 3.97 84.41 33 6.52 Yes 20 1.56 Yes 0 0 No -32 0.85 Yes 38 87.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46568836 - NM_017749 AMBRA1 1 0.29 0.24 13 -2.38 0 21 4.47 No 46 0.77 Yes 0 0 No -34 0.54 No 36 83.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 111201189 + NM_001634 AMD1 1 0.04 0.14 8 7.82 91.39 30 5.18 No 37 1.54 Yes 0 0 No -30 0.63 No 40 90.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 111210666 + NM_001634 AMD1 1 0.11 0.32 19 2.91 83 43 6.04 Yes 30 0.5 No 0 0 No -27 0.85 Yes 43 93.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 111210691 + NM_001634 AMD1 1 0.11 0.29 17 8.37 93.31 28 5.29 No 55 0.5 No 0 0 No -52 0.47 No 18 87.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 111211477 + NM_001634 AMD1 1 0.64 2.25 61 2.16 80.08 28 4.12 No 49 1.25 Yes 0 0 No -27 0.45 No 43 53.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 111213527 + NM_001634 AMD1 1 0.17 0.28 17 5.28 82.66 21 5.86 Yes 26 0.35 No 0 0 No -20 0.67 Yes 50 75.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 111214680 + NM_001634 AMD1 1 0.06 0.26 15 -7.44 77.09 28 9.37 Yes 15 2.15 Yes 0 0 No -27 0.9 Yes 43 96.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2577865 + NM_001145815 AMDHD2 1 0.89 0.36 19 3.39 85.36 12 3.57 No 54 -1.88 No 25 0.25 Yes -38 0.54 No 53 35.92 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 2578069 + NM_001145815 AMDHD2 1 1.21 0.32 14 -7.37 0 16 4.24 No 68 -5.37 No 0 0 No -25 0.55 No 45 32.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 56397016 - NM_001323511 AMFR 1 0.35 0.36 23 8.38 80.3 29 5.35 No 16 0.12 No 0 0 No -23 0.69 Yes 47 63.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 56403210 - NM_001323511 AMFR 1 0.1 0.18 10 2.2 0 18 4.58 No 54 0.87 Yes 0 0 No -17 0.75 Yes 53 75.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56408943 - NM_001323511 AMFR 1 0.07 0.14 7 7.96 92.02 17 6.93 Yes 4 1.29 Yes 0 0 No -29 0.32 No 49 38.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 56422766 - NM_001323511 AMFR 1 0.5 0.75 38 4.36 86.14 18 4.89 No 75 -3.65 No 23 0.68 Yes -23 0.68 Yes 47 56.81 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 56442051 - NM_001323511 AMFR 1 0.08 0.13 7 -13.35 0 16 4.24 No 14 0.97 Yes 27 0.71 Yes -37 0.61 No 33 27.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 56443429 - NM_001323511 AMFR 1 0.86 0.58 29 2.24 75.27 31 6.47 Yes -3 0.44 No 0 0 No -30 0.51 No 40 62.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 56443462 - NM_001323511 AMFR 1 0.19 0.13 9 1.59 79.37 34 6.15 Yes 54 1.21 Yes 0 0 No -29 0.49 No 37 44.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 109453478 - NM_015365 AMMECR1 1 0.31 0.13 7 8.74 82.63 35 6.31 Yes 22 1.06 Yes 0 0 No -27 0.47 No 43 63.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 109552766 - NM_015365 AMMECR1 1 6.93 1.83 59 11.79 92.08 36 5.26 No 63 1.42 Yes 38 0.49 Yes -35 0.48 No 41 58.8 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 128623385 - NM_001199140 AMMECR1L 1 1.33 0.58 32 6.62 84.09 19 7.14 Yes 28 1.5 Yes 0 0 No -18 0.61 No 52 75.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128623534 - NM_001199140 AMMECR1L 1 0.21 0.1 7 7.06 77.75 28 5.57 Yes 24 0.22 No 0 0 No -27 0.73 Yes 43 43.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 128624854 - NM_001199140 AMMECR1L 1 14.92 4.9 71 5.12 79.19 25 5.57 Yes 12 0.25 No 0 0 No -24 0.9 Yes 46 90.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128628532 - NM_001199140 AMMECR1L 1 0.52 0.19 11 -4.4 0 26 8.04 Yes 0 0.92 Yes 25 0.95 Yes -25 0.32 No 45 38.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 128630652 - NM_001199140 AMMECR1L 1 2.6 1.01 40 4.57 85.67 24 4.99 No 11 0.5 No 0 0 No -23 0.9 Yes 47 80.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128641881 - NM_001199140 AMMECR1L 1 0.51 0.11 7 0.21 0 9 3.87 No 18 0.97 Yes 0 0 No -30 0.85 Yes 40 91.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 31845624 - NM_001278412 AMN1 1 1.92 0.26 12 5.75 82.29 25 5.19 No 37 1.05 Yes 0 0 No -24 0.81 Yes 46 88.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 31862102 - NM_001278412 AMN1 1 12.96 1.58 53 9.44 99.52 31 5.91 Yes 18 1.39 Yes 30 0.71 Yes -27 0.86 Yes 43 81.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 110163535 + NM_139156 AMPD2 1 6.79 2.11 56 8.31 81.6 40 7.74 Yes 73 -1.28 No 27 0.78 Yes -26 0.64 No 31 82.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 110170034 + NM_139156 AMPD2 1 0.26 0.14 8 3.97 71.86 31 5.92 Yes NA NA NA 23 0.97 Yes -28 0.65 No 42 74.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 110170399 + NM_139156 AMPD2 1 0.26 0.18 10 -3.29 0 34 6.32 Yes 65 1.47 Yes 0 0 No -33 0.87 Yes 37 87.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 110170990 + NM_139156 AMPD2 1 0.36 0.28 15 3.07 0 31 5.57 Yes 18 1.24 Yes 25 0.94 Yes -30 0.81 Yes 40 91.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 110172421 + NM_139156 AMPD2 1 0.61 0.46 26 2.28 0 27 6.16 Yes 14 1.66 Yes 22 0.96 Yes -26 0.89 Yes 44 95.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 10485354 + NM_001172430 AMPD3 1 2.41 0.58 25 10.51 81.43 26 5.63 Yes 60 -1.34 No 0 0 No -26 0.69 Yes 44 49.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 10516454 + NM_001172430 AMPD3 1 0.3 0.14 9 -1.15 0 12 4.24 No 20 0.57 No 0 0 No -32 0.92 Yes 38 90.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 10518307 + NM_001172430 AMPD3 1 0.62 0.28 18 6.17 86.04 22 5.61 Yes 51 -3.97 No 21 0.9 Yes -21 0.9 Yes 49 83.92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 10519856 + NM_001172430 AMPD3 1 1.04 0.46 27 5.84 86.78 19 5 No 40 -2.66 No 0 0 No -21 0.7 Yes 52 31.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 10520791 + NM_001172430 AMPD3 1 0.31 0.13 7 11.87 86.87 50 4.92 No NA NA NA 40 0.16 Yes -40 0.41 No 30 40.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 10521616 + NM_001172430 AMPD3 1 3.22 1.24 41 5.14 74.28 32 6.16 Yes 19 1.08 Yes 18 0.73 Yes -31 0.87 Yes 39 82.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 10524329 + NM_001172430 AMPD3 1 0.43 0.19 12 5.91 77.78 29 5.9 Yes 16 0.61 No 28 0.88 Yes -28 0.86 Yes 42 94.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 10526076 + NM_001172430 AMPD3 1 0.37 0.21 14 0.99 0 30 7.79 Yes 17 0.92 Yes 27 0.79 Yes -8 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 10526088 + NM_001172430 AMPD3 1 1.12 0.57 26 -3.2 66.32 42 8.51 Yes 29 0.88 Yes 27 0.79 Yes -20 0.77 Yes 29 72.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 10526126 + NM_001172430 AMPD3 1 4.35 2.26 57 1.01 78.09 23 4.9 No 67 0.86 Yes 22 0.92 Yes -22 0.96 Yes 48 94.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 104115742 + NM_020978 AMY2B 1 2.07 0.22 12 -1.38 0 31 7.4 Yes 68 0.64 No 0 0 No -30 0.78 Yes 40 61.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 66245151 + NR_144443 AMZ2 1 0.21 0.58 32 2.12 65.21 24 6.01 Yes 11 0.66 No 23 0.78 Yes -23 0.88 Yes 47 50.43 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 66246500 + NR_144443 AMZ2 1 0.14 0.43 23 7.51 81.49 37 6.7 Yes 24 1.02 Yes 26 0.68 Yes -36 0.53 No 48 56.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 66252930 + NR_144443 AMZ2 1 0.1 0.18 8 4.35 69.91 58 7.3 Yes 15 1.35 Yes 27 0.74 Yes -27 0.82 Yes 43 89.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62967282 - NR_026903 AMZ2P1 1 7.75 1.29 48 8.9 96.4 35 7.84 Yes 22 0.81 Yes 0 0 No -34 0.7 Yes 36 72.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 112530095 - NM_022662 ANAPC1 1 0.15 0.21 13 7.14 84.42 28 5.39 No 15 0.36 No 35 0.39 Yes -27 0.65 No 43 88.75 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 112536317 - NM_022662 ANAPC1 1 0.08 0.13 8 6.04 89.97 20 4.42 No 30 1.07 Yes 0 0 No -24 0.51 No 46 60.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 112536342 - NM_022662 ANAPC1 1 0.38 0.63 32 -0.89 0 10 3.61 No 5 1.02 Yes 0 0 No -27 0.81 Yes 43 67.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 112537959 - NM_022662 ANAPC1 1 0.08 0.14 7 2 0 33 5.99 Yes 35 0.81 Yes 0 0 No -32 0.94 Yes 38 91.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 112547659 - NM_022662 ANAPC1 1 0.19 0.35 17 7.89 77.69 21 5.74 Yes 8 1.37 Yes 0 0 No -20 0.83 Yes 50 92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 112550129 - NM_022662 ANAPC1 1 0.07 0.13 8 2.45 0 27 5.83 Yes 14 1.13 Yes 0 0 No -30 0.64 No 38 66.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 112550129 - NM_022662 ANAPC1 1 0.18 0.33 15 2.45 0 27 5.83 Yes 14 1.13 Yes 0 0 No -30 0.64 No 38 66.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 112550129 - NM_022662 ANAPC1 1 0.17 0.29 15 2.45 0 27 5.83 Yes 14 1.13 Yes 0 0 No -30 0.64 No 38 66.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 112551875 - NM_022662 ANAPC1 1 0.24 0.44 26 5.64 81.87 29 4.93 No 26 0.84 Yes 0 0 No -28 0.78 Yes 42 56.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 112552471 - NM_022662 ANAPC1 1 0.08 0.15 7 -15.18 0 35 5.66 Yes 15 0.64 No 0 0 No -27 0.71 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 112557277 - NM_022662 ANAPC1 1 0.17 0.31 15 9 89.09 25 5.34 No 12 0.73 No 0 0 No -24 0.81 Yes 46 90.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 112579006 - NM_022662 ANAPC1 1 0.67 0.6 31 6.26 0 18 4.57 No 55 1.46 Yes 0 0 No -17 0.76 Yes 53 67.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 112579018 - NM_022662 ANAPC1 1 0.62 0.54 28 4.06 77.64 16 3.5 No 43 1.46 Yes 0 0 No -55 0.52 No 51 52.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 112579043 - NM_022662 ANAPC1 1 2.93 2.58 62 -1.67 68.81 31 6.92 Yes 18 1.46 Yes 21 0.62 Yes -30 0.92 Yes 40 85.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 112582766 - NM_022662 ANAPC1 1 0.34 0.44 21 -1.41 60.06 16 5.23 No 59 1.3 Yes 23 0.82 Yes -42 0.61 No 28 63.09 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 112589003 - NM_022662 ANAPC1 1 0.06 0.13 9 -1.25 0 19 4.23 No 75 0.9 Yes 0 0 No -52 0.76 Yes 18 81.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 112598593 - NM_022662 ANAPC1 1 0.12 0.17 8 5.76 79.47 27 5.57 Yes 15 -1.66 No 0 0 No -26 0.62 No 44 53.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112605356 - NM_022662 ANAPC1 1 0.21 0.21 13 6.3 80.66 24 4.95 No 23 0.5 No 0 0 No -24 0.83 Yes 46 88.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 112608131 - NM_022662 ANAPC1 1 0.45 0.49 27 8.27 89.58 21 6.16 Yes 62 2.27 Yes 0 0 No -20 0.68 Yes 50 59.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 112615977 - NM_022662 ANAPC1 1 0.06 0.11 7 -14.56 73.87 33 6.07 Yes 20 1.64 Yes 0 0 No -32 0.65 No 38 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 112616169 - NM_022662 ANAPC1 1 0.08 0.18 8 3.43 80.12 23 7.24 Yes 10 1.21 Yes 0 0 No -22 0.86 Yes 48 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 112616172 - NM_022662 ANAPC1 1 0.15 0.26 14 4.96 85.02 20 7.04 Yes 7 1.23 Yes 0 0 No -19 0.69 Yes 51 82.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 112620033 - NM_022662 ANAPC1 1 0.14 0.24 14 7.04 88.41 22 4.66 No 9 1.49 Yes 0 0 No -27 0.41 No 43 60.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 112625672 - NM_022662 ANAPC1 1 0.84 1.71 58 -3.95 77.19 26 5.28 No 13 0.43 No 0 0 No -25 0.6 No 45 81.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 112627609 - NM_022662 ANAPC1 1 0.1 0.22 11 7.82 84.21 30 5.37 No 1 0.88 Yes 0 0 No -29 0.76 Yes 40 64.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 112630982 - NM_022662 ANAPC1 1 0.16 0.15 10 1.32 0 31 6.08 Yes 68 -3.82 No 0 0 No -30 0.43 No 37 54.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112630982 - NM_022662 ANAPC1 1 0.14 0.15 9 1.32 0 31 6.08 Yes 68 -3.82 No 0 0 No -30 0.43 No 37 54.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112636544 - NM_022662 ANAPC1 1 0.76 1.13 48 -2.21 0 35 6.67 Yes 2 0.58 No 0 0 No -34 0.5 No 36 48.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112638471 - NM_022662 ANAPC1 1 1.48 1.92 60 6.62 85.14 31 5.85 Yes 18 1.12 Yes 22 0.65 Yes -33 0.69 Yes 40 55.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 145920447 - NM_001318367 ANAPC10 1 8.27 9.01 72 8.41 88.97 32 8.33 Yes 19 1.13 Yes 31 0.71 Yes -31 0.85 Yes 39 81.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 145920447 - NM_001318367 ANAPC10 1 0.1 0.14 7 8.41 88.97 32 8.33 Yes 19 1.13 Yes 31 0.71 Yes -31 0.85 Yes 39 81.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 145954524 - NM_001318367 ANAPC10 1 8.2 8.57 71 9.59 92.63 25 5.98 Yes 24 0.93 Yes 24 0.69 Yes -24 0.82 Yes 46 85.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 145962568 - NM_001318367 ANAPC10 1 0.15 0.15 9 9.49 89.22 37 6.18 Yes 24 -0.48 No 0 0 No -31 0.37 No 45 31.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 145983208 - NM_001318367 ANAPC10 1 0.1 0.13 7 9.11 93.66 29 7.5 Yes 16 1.11 Yes 0 0 No -28 0.36 No 39 50.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 145985514 - NM_001318367 ANAPC10 1 0.13 0.14 8 5.4 77.16 49 8.35 Yes 36 1.58 Yes 27 0.55 Yes -48 0.63 No 22 81.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 145985842 - NM_001318367 ANAPC10 1 0.43 0.58 31 -0.05 74.4 40 5.47 No 73 0.19 No 0 0 No -30 0.73 Yes 40 70.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 71820845 - NM_001278488 ANAPC15 1 0.07 0.14 9 9.05 78.98 22 6.22 Yes 76 -2.64 No 0 0 No -34 0.42 No 36 53.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71820987 - NM_001278488 ANAPC15 1 2.75 5.46 70 3.53 70.68 25 5.57 Yes 12 0.84 Yes 24 0.91 Yes -24 0.81 Yes 46 61.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 71821308 - NM_001278488 ANAPC15 1 0.88 1.26 44 5.55 82.51 16 4.75 No 45 -3.74 No 23 0.81 Yes -23 0.73 Yes 47 54.7 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 71822333 - NM_001278488 ANAPC15 1 245.69 100.36 72 6.8 81.15 15 5.23 No 2 1.36 Yes 19 0.61 Yes -19 0.74 Yes 51 58.41 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 73979817 + NM_001242546 ANAPC16 1 1.45 0.51 26 -6.91 0 9 3.87 No 25 1.39 Yes 0 0 No -37 0.62 No 25 80.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 73989756 + NM_001242546 ANAPC16 1 0.05 0.13 8 4.99 91.39 41 5.92 Yes 53 0.99 Yes 0 0 No -23 0.53 No 46 56.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 73983650 + NM_001242546 ANAPC16 1 0.43 0.4 23 -1.42 0 39 8.46 Yes 41 0.74 No 0 0 No -30 0.44 No 41 54.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 73989756 + NM_001242546 ANAPC16 1 0.09 0.21 13 4.99 91.39 41 5.92 Yes 53 0.99 Yes 0 0 No -23 0.53 No 46 56.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 73989756 + NM_001242546 ANAPC16 1 0.1 0.22 13 4.99 91.39 41 5.92 Yes 53 0.99 Yes 0 0 No -23 0.53 No 46 56.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 140069921 - NM_013366 ANAPC2 1 0.67 0.43 24 -2.66 0 18 6 Yes 57 0.5 No 25 0.78 Yes -32 0.5 No 41 38.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 140069968 - NM_013366 ANAPC2 1 0.32 0.22 13 -16.59 0 14 3.57 No 10 0.21 No 25 0.78 Yes -22 0.53 No 48 63.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 140070167 - NM_013366 ANAPC2 1 0.12 0.11 8 8.88 90.74 19 5.74 Yes 6 0.71 No 0 0 No -26 0.57 No 52 65.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140071722 - NM_013366 ANAPC2 1 0.2 0.17 10 5.55 87.88 21 5.54 No -4 0.01 No 0 0 No -25 0.68 Yes 45 78.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140072569 - NM_013366 ANAPC2 1 1.04 0.93 40 2.82 83.59 23 5.1 No 35 2.31 Yes 0 0 No -47 0.34 No 47 52.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 140074996 - NM_013366 ANAPC2 1 0.46 0.31 18 3.14 74.36 20 6.57 Yes 7 0.48 No 21 0.42 Yes -19 0.92 Yes 51 95.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140076253 - NM_013366 ANAPC2 1 0.24 0.22 14 -3.74 68.54 23 6.78 Yes 10 0.2 No 0 0 No -22 0.78 Yes 48 57.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 140078235 - NM_013366 ANAPC2 1 2.31 2.1 62 -0.65 0 17 4.24 No 19 0.78 Yes 0 0 No -31 0.9 Yes 39 92.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140079564 - NM_013366 ANAPC2 1 0.63 0.4 23 8.97 83.09 18 5.99 Yes 5 1.33 Yes 21 0.96 Yes -29 0.57 No 53 80.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 140079799 - NM_013366 ANAPC2 1 0.25 0.17 10 8.78 74.83 15 6.24 Yes 76 0.21 No 0 0 No -32 0.47 No 36 66.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140080458 - NM_013366 ANAPC2 1 0.58 0.35 19 6.38 75.5 26 5.66 Yes 67 -4.41 No 0 0 No -25 0.88 Yes 45 76.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140080748 - NM_013366 ANAPC2 1 0.27 0.18 11 5.38 78.2 19 5.74 Yes 6 1.42 Yes 0 0 No -18 0.64 No 52 70.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140080803 - NM_013366 ANAPC2 1 2.08 1.26 47 -1.69 0 9 3.87 No NA NA NA 0 0 No -27 0.57 No 43 59.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 25385909 + NM_001286756 ANAPC4 1 0.3 0.18 12 8.86 83.3 29 5.48 No 16 1.61 Yes 0 0 No -28 0.79 Yes 42 91.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25393996 + NM_001286756 ANAPC4 1 0.9 0.74 39 4.01 79.3 28 6.77 Yes 48 1.45 Yes 0 0 No -27 0.76 Yes 43 93.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25394384 + NM_001286756 ANAPC4 1 1.2 0.67 33 8.93 80.88 36 4.94 No 5 0.73 No 0 0 No -38 0.38 No 32 51.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 25395460 + NM_001286756 ANAPC4 1 0.66 0.35 22 2.19 65.31 39 6.09 Yes 26 0.67 No 21 0.65 Yes -38 0.44 No 32 76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 25395504 + NM_001286756 ANAPC4 1 0.25 0.11 8 2.01 69.83 28 5.48 No 15 1.19 Yes 0 0 No -27 0.91 Yes 43 94.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25398472 + NM_001286756 ANAPC4 1 0.51 0.22 12 3.97 75.88 29 6.78 Yes 16 1.52 Yes 0 0 No -35 0.36 No 42 56.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 25403406 + NM_001286756 ANAPC4 1 0.47 0.24 15 9.49 82.05 27 6.4 Yes 14 1.61 Yes 0 0 No -26 0.94 Yes 44 93.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25415270 + NM_001286756 ANAPC4 1 0.15 0.13 7 -6.01 0 35 7.14 Yes 69 1.47 Yes 0 0 No -44 0.91 Yes 26 95.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25416270 + NM_001286756 ANAPC4 1 2.63 1.06 46 9.31 85.27 40 7.45 Yes 55 0.52 No 0 0 No -24 0.82 Yes 46 80.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 25417021 + NM_001286756 ANAPC4 1 2.53 2.49 68 4.82 77.78 26 5.88 Yes 13 1.46 Yes 0 0 No -25 0.84 Yes 45 88.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121747815 - NM_001137559 ANAPC5 1 0.15 0.72 31 11.41 85.43 32 5.11 No 49 1.66 Yes 31 0.55 Yes -31 0.59 No 52 57.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 121755954 - NM_001137559 ANAPC5 1 0.03 0.13 8 -6.95 0 41 5.21 No 28 0.63 No 0 0 No -40 0.62 No 30 72.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 121755958 - NM_001137559 ANAPC5 1 0.15 0.68 36 3.04 65.22 37 4.96 No 24 0.63 No 26 0.81 Yes -36 0.63 No 34 75.16 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 121756155 - NM_001137559 ANAPC5 1 0.13 0.53 30 9.93 89.19 41 7.74 Yes 63 0.48 No 24 0.66 Yes -24 0.54 No 46 76.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 121756208 - NM_001137559 ANAPC5 1 0.27 1.06 42 7.62 76.68 29 5.24 No 35 1.3 Yes 22 0.85 Yes -47 0.82 Yes 42 70.57 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 121756226 - NM_001137559 ANAPC5 1 0.02 0.1 7 -16.19 0 30 7.56 Yes 17 1.33 Yes 22 0.85 Yes -29 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 121766277 - NM_001137559 ANAPC5 1 3.84 3.24 65 0.39 68.93 27 5.74 Yes 50 0.83 Yes 22 0.59 Yes -26 0.66 Yes 44 66.88 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 121766301 - NM_001137559 ANAPC5 1 309.37 251.72 72 5.78 75.8 39 6.02 Yes 26 0.84 Yes 32 0.35 Yes -38 0.43 No 32 70.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 121766301 - NM_001137559 ANAPC5 1 0.34 0.29 15 5.78 75.8 39 6.02 Yes 26 0.84 Yes 32 0.35 Yes -38 0.43 No 32 70.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 121766650 - NM_001137559 ANAPC5 1 0.2 0.17 10 6.35 82.07 47 6.76 Yes 34 0.96 Yes 18 0.71 Yes -20 0.47 No 50 77.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 121769243 - NM_001137559 ANAPC5 1 0.03 0.13 8 2.14 67.61 60 6.94 Yes 47 0.62 No 19 0.52 Yes -26 0.47 No 51 56.14 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 110815649 - NM_001137664 ANAPC7 1 0.56 0.93 37 7.14 73.43 32 6.86 Yes -4 0.62 No 0 0 No -31 0.91 Yes 39 96.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110816456 - NM_001137664 ANAPC7 1 0.25 0.44 27 -1.56 68.81 35 6.63 Yes 64 0.47 No 0 0 No -34 0.5 No 28 65.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110824172 - NM_001137664 ANAPC7 1 0.65 0.71 33 1.97 73.52 18 5.65 Yes 5 0.12 No 0 0 No -25 0.66 No 49 55.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110824172 - NM_001137664 ANAPC7 1 0.77 0.69 37 1.97 73.52 18 5.65 Yes 5 0.12 No 0 0 No -25 0.66 No 49 55.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110824224 - NM_001137664 ANAPC7 1 1.02 1.15 45 -1.36 57.87 20 5.48 No 70 -3.7 No 0 0 No -19 0.51 No 51 34.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110824267 - NM_001137664 ANAPC7 1 0.16 0.21 12 -2.3 0 12 3.96 No 65 -4.81 No 0 0 No -23 0.36 No 47 42.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110824267 - NM_001137664 ANAPC7 1 0.11 0.14 8 -2.3 0 12 3.96 No 65 -4.81 No 0 0 No -23 0.36 No 47 42.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110830951 - NM_001137664 ANAPC7 1 1 1.54 55 5.97 80.98 36 6 Yes 43 0.43 No 0 0 No -35 0.88 Yes 35 82.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110834188 - NM_001137664 ANAPC7 1 0.43 0.53 25 6.02 77.9 27 5.39 No 56 0.35 No 0 0 No -26 0.79 Yes 44 90.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110839310 - NM_001137664 ANAPC7 1 0.59 0.72 34 10.13 89.34 26 5.14 No 8 0.93 Yes 0 0 No -25 0.87 Yes 45 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 77270759 - NM_015305 ANGEL1 1 4.83 1.04 48 9.35 91.63 44 7 Yes 31 1.07 Yes 22 0.47 Yes -43 0.54 No 27 80.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 77271346 - NM_015305 ANGEL1 1 3.38 0.74 33 1.83 0 35 4.51 No 66 0.63 No 0 0 No -34 0.23 No 36 41.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 77276598 - NM_015305 ANGEL1 1 1.23 0.29 17 6.5 85.67 19 7.62 Yes 6 1.18 Yes 18 0.6 Yes -18 0.59 No 52 85.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 213176253 - NM_001300755 ANGEL2 1 0.5 0.26 15 4.62 0 36 4.47 No 23 0.82 Yes 0 0 No -35 0.52 No 39 69.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 213178043 - NM_001300755 ANGEL2 1 0.76 0.46 26 2.24 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.74 Yes 51 83.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 213178046 - NM_001300755 ANGEL2 1 0.39 0.19 11 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -16 0.42 No 54 65.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10203242 - NM_001321411 ANGPTL6 1 0.24 0.15 8 12.15 81.23 25 5.01 No 12 1.68 Yes 0 0 No -24 0.67 Yes 46 72.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10204140 - NM_001321411 ANGPTL6 1 0.41 0.14 7 -9.11 61.6 24 6.84 Yes 11 0.58 No 0 0 No -29 0.72 Yes 41 53.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 10204239 - NM_001321411 ANGPTL6 1 2.16 0.78 39 3.27 66.5 15 6.4 Yes 63 1.75 Yes 0 0 No -14 0.34 No 56 30.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 41529945 - NM_020476 ANK1 1 34.41 5.71 68 8.42 93.95 19 4.9 No 6 0.29 No 26 0.82 Yes -26 0.59 No 44 68.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 4067468 - NM_001257999 ANKFY1 1 2.68 1.51 52 8.81 90.91 20 6.03 Yes 7 1.1 Yes 0 0 No -22 0.77 Yes 48 83.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4070488 - NM_001257999 ANKFY1 1 0.6 0.35 15 6.44 94.1 17 4.25 No 42 1.25 Yes 0 0 No -24 0.73 Yes 46 70.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4074573 - NM_001257999 ANKFY1 1 0.27 0.11 7 5.22 70.73 39 5.75 Yes 26 1.5 Yes 0 0 No -38 0.54 No 32 79.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 4076683 - NM_001257999 ANKFY1 1 0.4 0.25 13 8.42 84.18 67 7.82 Yes 39 0.31 No 0 0 No -25 0.85 Yes 45 69.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 4085128 - NM_001257999 ANKFY1 1 0.63 0.29 18 2.34 0 35 5.4 No 22 0.47 No 0 0 No -28 0.77 Yes 42 75.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4085286 - NM_001257999 ANKFY1 1 1.36 0.63 30 9.51 89.74 16 6.56 Yes 3 2.24 Yes 0 0 No -31 0.71 Yes 42 63.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 4085648 - NM_001257999 ANKFY1 1 24.57 6.26 72 2.28 68.9 36 7.36 Yes 23 -2.05 No 35 0.43 Yes -35 0.37 No 35 42.97 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 4096156 - NM_001257999 ANKFY1 1 0.91 0.31 18 8.31 88.85 31 5.27 No 41 1.14 Yes 0 0 No -30 0.68 Yes 40 71.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4098081 - NM_001257999 ANKFY1 1 0.94 0.31 19 -0.38 60.11 52 7.44 Yes 69 0.1 No 0 0 No -36 0.58 No 34 85.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 4098134 - NM_001257999 ANKFY1 1 0.72 0.26 16 3.52 81.37 29 6.31 Yes 64 0.39 No 0 0 No -28 0.55 No 42 55.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4110871 - NM_001257999 ANKFY1 1 2.84 2.11 58 7.46 84.48 28 5.04 No 42 -2.46 No 0 0 No -28 0.53 No 42 45.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4122984 - NM_001257999 ANKFY1 1 0.28 0.11 8 8.5 82.86 55 8.37 Yes 42 1.12 Yes 0 0 No -54 0.79 Yes 16 87.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4135225 - NM_001257999 ANKFY1 1 0.65 0.29 16 11.62 98.16 38 7.26 Yes 29 1.71 Yes 0 0 No -41 0.9 Yes 29 89.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 14741488 - NM_054027 ANKH 1 4.3 1.15 44 7.36 75.14 37 6.14 Yes 24 1.45 Yes 23 0.96 Yes -23 0.82 Yes 47 81.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 14741766 - NM_054027 ANKH 1 0.42 0.11 8 2 77.76 57 7.65 Yes 5 0.31 No 0 0 No -24 0.63 No 29 49.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 14747522 - NM_054027 ANKH 1 1.44 0.58 29 7.39 85.02 22 6.78 Yes 9 0.63 No 0 0 No -21 0.75 Yes 49 80.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 14753806 - NM_054027 ANKH 1 0.62 0.36 21 6.93 82.96 40 5.98 Yes 53 0.58 No 0 0 No -32 0.84 Yes 38 80.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 139790329 + NM_017747 ANKHD1 1 1.26 1.94 59 10.85 84.06 24 4.92 No 11 0.98 Yes 0 0 No -23 0.51 No 47 53.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 139818078 + NM_017747 ANKHD1 1 2.03 3.1 63 -1.17 62.65 37 6.48 Yes -3 0.87 Yes 0 0 No -36 0.49 No 38 26.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 139818087 + NM_017747 ANKHD1 1 14.21 21.26 72 0.09 0 19 4.19 No 6 0.32 No 0 0 No -18 0.84 Yes 52 85.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 139820568 + NM_017747 ANKHD1 1 0.07 0.17 10 0.16 0 22 5.84 Yes 9 0.66 No 0 0 No -21 0.87 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 139820970 + NM_017747 ANKHD1 1 0.13 0.26 17 1.86 70.71 38 4.84 No 25 0.79 Yes 0 0 No -22 0.44 No 49 56.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 139851823 + NM_017747 ANKHD1 1 1.33 0.53 30 12.3 95.86 24 5.48 No 11 0.74 No 23 0.59 Yes -23 0.82 Yes 47 78.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 139851823 + NM_017747 ANKHD1 1 319.61 124.24 72 12.3 95.86 24 5.48 No 11 0.74 No 23 0.59 Yes -23 0.82 Yes 47 78.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 139864260 + NM_017747 ANKHD1 1 0.47 0.72 36 4.39 76.63 26 7.35 Yes 13 1.21 Yes 0 0 No -25 0.66 No 39 69.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 139870773 + NM_017747 ANKHD1 1 0.3 0.38 21 4.19 0 174 10.03 Yes NA NA NA 0 0 No -41 0.25 No 39 35.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 139877622 + NM_017747 ANKHD1 1 0.12 0.15 10 10.34 88.17 26 6.08 Yes 1 0.25 No 0 0 No -25 0.92 Yes 45 90.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 139887352 + NM_017747 ANKHD1 1 0.08 0.11 8 3.51 78.22 31 5.6 Yes 34 1.05 Yes 0 0 No -24 0.5 No 46 44.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 139916922 + NM_017747 ANKHD1 1 156.07 68.81 72 5.81 91.34 24 5.1 No 44 0.81 Yes 24 0.44 Yes -24 0.4 No 46 52.04 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 91926480 + NM_019004 ANKIB1 1 0.47 0.67 30 11.03 88.08 19 3.82 No 29 0.13 No 0 0 No -27 0.65 No 43 52.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 91942584 + NM_019004 ANKIB1 1 1 0.94 43 10.43 91.67 18 5.1 No 9 0.7 No 0 0 No -21 0.7 Yes 53 64.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 91948650 + NM_019004 ANKIB1 1 0.21 0.18 12 -0.11 0 10 4 No 43 0.91 Yes 0 0 No -24 0.75 Yes 37 78.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 91948933 + NM_019004 ANKIB1 1 0.83 0.97 42 9.94 90.23 30 4.37 No 11 0.67 No 23 0.9 Yes -23 0.89 Yes 47 91.3 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 91955241 + NM_019004 ANKIB1 1 0.58 0.69 33 7.12 88.28 32 5.82 Yes 55 1.79 Yes 31 0.77 Yes -31 0.6 No 39 79.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 91962941 + NM_019004 ANKIB1 1 0.39 0.49 25 8.48 82.37 20 7.15 Yes 7 1.44 Yes 0 0 No -36 0.54 No 34 58.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 91972311 + NM_019004 ANKIB1 1 0.4 0.49 27 -3.39 83.57 26 6.38 Yes 47 1.05 Yes 28 0.74 Yes -26 0.5 No 45 70.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 91977260 + NM_019004 ANKIB1 1 8.48 5.39 71 2.63 68.73 39 5.96 Yes 26 0.21 No 21 0.37 Yes -31 0.36 No 39 49.23 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 91980286 + NM_019004 ANKIB1 1 0.26 0.18 11 -2.02 64.49 28 5.65 Yes 25 1.04 Yes 0 0 No -27 0.8 Yes 43 71.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 92020483 + NM_019004 ANKIB1 1 0.99 1.1 51 0.33 0 33 6.34 Yes 20 0.96 Yes 0 0 No -32 0.37 No 38 68.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 92020735 + NM_019004 ANKIB1 1 0.18 0.17 10 8.97 82.67 27 5.48 No -2 -1.53 No 0 0 No -26 0.85 Yes 44 79.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 92022527 + NM_019004 ANKIB1 1 0.4 0.36 18 9.01 91.39 24 4.8 No 26 0.7 No 0 0 No -24 0.43 No 46 58.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 92025696 + NM_019004 ANKIB1 1 5.37 4.9 72 1.6 72.47 25 5.2 No 23 1.25 Yes 0 0 No -24 0.9 Yes 46 91.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17392870 + NM_152363 ANKLE1 1 10.28 1.72 53 -1.03 0 22 7.62 Yes 9 0.71 No 0 0 No -21 0.91 Yes 49 83.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17392873 + NM_152363 ANKLE1 1 1.82 0.33 21 -8.63 0 12 4.12 No 12 0.5 No 26 0.47 Yes -24 0.89 Yes 46 84.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17396243 + NM_152363 ANKLE1 1 0.43 0.14 10 -9.94 0 24 5.48 No 11 1.2 Yes 0 0 No -23 0.85 Yes 47 70.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133306878 - NM_015114 ANKLE2 1 0.09 0.11 7 3.49 70.38 11 6.48 Yes 52 -1.58 No 24 0.91 Yes -22 0.64 No 35 58.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 133310386 - NM_015114 ANKLE2 1 0.13 0.14 9 5.04 87.62 27 5.1 No 14 1.16 Yes 0 0 No -26 0.8 Yes 44 74.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133310658 - NM_015114 ANKLE2 1 8.76 9.82 72 8.13 85.86 26 7.55 Yes 13 1.47 Yes 25 0.95 Yes -25 0.94 Yes 45 95.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133311079 - NM_015114 ANKLE2 1 0.94 0.76 40 0.92 0 19 7.99 Yes 6 1.04 Yes 0 0 No -18 0.23 No 40 61.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133311083 - NM_015114 ANKLE2 1 7.95 6.67 71 9.57 91.87 15 7.77 Yes 2 1.05 Yes 0 0 No -35 0.27 No 44 68.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133312936 - NM_015114 ANKLE2 1 2.73 2.26 61 7.56 93.23 28 5.63 Yes 47 -2.32 No 0 0 No -26 0.48 No 43 45.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133313807 - NM_015114 ANKLE2 1 0.38 0.38 22 2.78 70.65 33 6.34 Yes 20 1.22 Yes 0 0 No -32 0.91 Yes 38 93.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133316849 - NM_015114 ANKLE2 1 0.26 0.33 20 5.15 84.37 16 5.47 No 33 1.69 Yes 0 0 No -24 0.56 No 47 62.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133317265 - NM_015114 ANKLE2 1 0.29 0.31 16 10.35 87.12 39 6.6 Yes 41 -1.04 No 0 0 No -38 0.67 Yes 32 81.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133318478 - NM_015114 ANKLE2 1 3.02 4.08 67 6.1 77.03 19 5.82 Yes 35 0.32 No 25 0.43 Yes -25 0.6 No 45 58.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 133319187 - NM_015114 ANKLE2 1 0.08 0.1 7 2.61 73.64 34 6.32 Yes -1 0.2 No 32 0.51 Yes -25 0.91 Yes 45 89.78 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133319246 - NM_015114 ANKLE2 1 1.58 2.07 59 1.46 74.76 23 3.91 No 70 -5.31 No 0 0 No -21 0.75 Yes 48 54.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 133324603 - NM_015114 ANKLE2 1 0.54 0.74 34 -0.83 0 27 5.57 Yes 27 -2.27 No 0 0 No -26 0.93 Yes 44 87.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133324894 - NM_015114 ANKLE2 1 0.33 0.46 20 4.92 73.12 29 5.73 Yes 16 1.22 Yes 0 0 No -28 0.76 Yes 42 78.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133327432 - NM_015114 ANKLE2 1 0.08 0.11 7 -0.38 0 33 6.86 Yes 20 1.46 Yes 0 0 No -32 0.7 Yes 38 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133333345 - NM_015114 ANKLE2 1 1.25 0.67 34 4.48 87 25 7.48 Yes 12 1.36 Yes 0 0 No -24 0.94 Yes 46 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133333348 - NM_015114 ANKLE2 1 5.61 2.63 62 7.09 85.23 22 7.28 Yes 9 1.38 Yes 0 0 No -21 0.94 Yes 49 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 241456826 - NM_001282771 ANKMY1 1 1.87 0.15 9 7.27 84.47 22 3.62 No 43 0.46 No 0 0 No -26 0.51 No 44 65.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 241459872 - NM_001282771 ANKMY1 1 2.54 0.19 12 9.51 80.95 24 6.72 Yes 69 -5.44 No 24 0.66 Yes -23 0.61 No 46 41.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 72848670 - NM_023039 ANKRA2 1 1.24 0.43 22 4.04 0 11 4.12 No 11 0.75 No 0 0 No -26 0.53 No 37 60.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 72849331 - NM_023039 ANKRA2 1 0.18 0.13 8 6.35 80.86 40 6.63 Yes 27 0.82 Yes 25 0.87 Yes -21 0.49 No 41 56.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 72852515 - NM_023039 ANKRA2 1 0.89 0.89 42 6.03 82.92 47 7.19 Yes 47 0.65 No 0 0 No -23 0.89 Yes 47 73.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 111536159 - NR_104587 ANKRD10 1 0.42 0.46 25 -1.46 52.77 17 4.69 No 26 1.04 Yes 24 0.85 Yes -38 0.37 No 32 42.35 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 111546741 - NR_104587 ANKRD10 1 25.53 1.99 58 7.49 84.1 45 5.98 Yes 52 1.11 Yes 0 0 No -44 0.64 No 26 82.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 111553009 - NR_104587 ANKRD10 1 15.98 1 44 2.55 80.02 17 6.12 Yes 4 1.09 Yes 26 0.71 Yes -26 0.75 Yes 44 83.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111553042 - NR_104587 ANKRD10 1 11.41 1.03 42 6.77 83.28 28 6.4 Yes 59 0.37 No 27 0.4 Yes -19 0.59 No 51 69.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr13 111553425 - NR_104587 ANKRD10 1 5.65 0.47 24 10.06 89.09 53 7.9 Yes 72 1.87 Yes 0 0 No -32 0.8 Yes 38 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 111555887 - NR_104587 ANKRD10 1 59.71 4.63 66 5.71 78.18 19 6.32 Yes 6 0.67 No 23 0.66 Yes -21 0.54 No 49 63.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 111556663 - NR_104587 ANKRD10 1 2.1 0.17 8 9.48 93.34 21 5.1 No 8 0.83 Yes 0 0 No -20 0.85 Yes 50 86.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 111556690 - NR_104587 ANKRD10 1 11.71 0.89 39 8.53 88.22 37 4.58 No 32 -1.81 No 22 0.82 Yes -22 0.94 Yes 48 93.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111557128 - NR_104587 ANKRD10 1 39.74 2.86 60 8.56 89.9 45 7.22 Yes 59 -3.19 No 0 0 No -32 0.65 No 38 59.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111557581 - NR_104587 ANKRD10 1 26.14 2.28 55 8.83 92.12 45 8.29 Yes 32 1.25 Yes 26 0.67 Yes -26 0.72 Yes 44 73.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111564119 - NR_104587 ANKRD10 1 4.25 3.56 67 3.67 0 47 6.19 Yes 48 -1.54 No 29 0.03 Yes -49 0.9 Yes 21 87.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89337000 - NM_001256182 ANKRD11 1 2.22 0.54 27 8.56 79.87 28 5.83 Yes 15 1.02 Yes 0 0 No -27 0.88 Yes 43 95.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89353522 - NM_001256182 ANKRD11 1 1.45 0.64 30 2.31 77.07 15 5.39 No 47 0.18 No 23 0.61 Yes -23 0.85 Yes 47 64.52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 89354771 - NM_001256182 ANKRD11 1 0.73 0.31 15 10.98 83.35 33 5.65 Yes 20 0.26 No 0 0 No -32 0.74 Yes 45 73.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89357269 - NM_001256182 ANKRD11 1 0.11 0.11 8 -2.93 69.18 20 4.69 No 67 -3.71 No 30 0.72 Yes -20 0.34 No 58 30.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 89374138 - NM_001256182 ANKRD11 1 0.99 1.22 45 8.67 92.99 25 4.56 No 68 -1.77 No 0 0 No -25 0.65 No 45 61.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89379998 - NM_001256182 ANKRD11 1 5.67 6.99 71 3.79 73.09 28 4.58 No 56 1.04 Yes 27 0.67 Yes -27 0.65 No 48 65.24 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 9191965 + NM_001204056 ANKRD12 1 0.1 0.18 10 9.96 87.71 29 5.91 Yes 16 1.64 Yes 0 0 No -28 0.94 Yes 42 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 9195550 + NM_001204056 ANKRD12 1 0.06 0.1 7 -12 73.32 41 4.65 No 17 0.87 Yes 0 0 No -34 0.49 No 36 53.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 9200511 + NM_001204056 ANKRD12 1 0.76 0.67 33 9.41 79.1 37 7.74 Yes 24 1.86 Yes 30 0.79 Yes -36 0.61 No 34 84.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr18 9204473 + NM_001204056 ANKRD12 1 69.11 58.22 72 10.47 82.89 93 8.13 Yes 47 0.64 No 22 0.08 Yes -51 0.48 No 19 81.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr18 9204705 + NM_001204056 ANKRD12 1 0.65 0.54 34 10.68 88.72 30 8.47 Yes 17 1.24 Yes 0 0 No -29 0.8 Yes 41 91.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 9208656 + NM_001204056 ANKRD12 1 0.12 0.13 8 -6.21 66.83 51 6.66 Yes 12 0.49 No 0 0 No -24 0.94 Yes 46 92.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 9221853 + NM_001204056 ANKRD12 1 0.1 0.15 11 -0.76 0 31 6.08 Yes 18 1.29 Yes 0 0 No -30 0.83 Yes 40 92.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 9234101 + NM_001204056 ANKRD12 1 0.26 0.15 11 6.87 84.51 15 4.17 No 12 0.82 Yes 0 0 No -24 0.94 Yes 46 92.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 9235635 + NM_001204056 ANKRD12 1 2.48 1.42 49 8.5 90.72 25 4.58 No 58 0.1 No 24 0.39 Yes -24 0.38 No 48 38.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 9239474 + NM_001204056 ANKRD12 1 3.44 1.94 55 6.95 88.61 25 5.26 No 34 1.27 Yes 24 0.91 Yes -24 0.93 Yes 46 94.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 9264814 + NM_001204056 ANKRD12 1 0.53 0.26 18 7.84 84.15 19 5.98 Yes 6 0.59 No 0 0 No -24 0.53 No 46 65.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 9271899 + NM_001204056 ANKRD12 1 1.71 0.96 44 10.29 95.74 32 6.32 Yes 19 1.08 Yes 0 0 No -31 0.66 No 39 77.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 9283812 + NM_001204056 ANKRD12 1 0.35 0.19 11 5.31 83.61 32 7.33 Yes 19 2.21 Yes 0 0 No -31 0.88 Yes 39 96.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110449795 + NM_033121 ANKRD13A 1 0.75 0.51 30 2.15 68.91 51 6.58 Yes 75 0.02 No 22 0.62 Yes -30 0.74 Yes 40 59.13 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 110458912 + NM_033121 ANKRD13A 1 2.85 3.92 68 10.91 94.57 30 6 Yes 17 0.74 No 29 0.81 Yes -29 0.83 Yes 41 88.8 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110465512 + NM_033121 ANKRD13A 1 14.47 17.15 72 4.85 80.81 37 4.5 No 11 0.58 No 21 0.34 Yes -23 0.29 No 34 29.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 110466313 + NM_033121 ANKRD13A 1 8.85 12.69 72 -0.7 0 14 4.47 No 74 1.08 Yes 25 0.8 Yes -39 0.37 No 34 47.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 110470251 + NM_033121 ANKRD13A 1 0.41 0.47 25 7.28 72.71 27 8.03 Yes 14 0.62 No 0 0 No -26 0.64 No 44 48.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110474075 + NM_033121 ANKRD13A 1 0.09 0.1 7 0.95 0 13 4.36 No 34 0.69 No 0 0 No -36 0.89 Yes 34 92.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 27938945 + NM_152345 ANKRD13B 1 3.53 0.28 15 6.04 80.5 32 5.62 Yes 19 0.66 No 0 0 No -31 0.59 No 39 41.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 27939100 + NM_152345 ANKRD13B 1 2.19 0.19 13 2.29 80.81 15 5.1 No 61 -4.78 No 25 0.9 Yes -19 0.47 No 51 45.75 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 27939188 + NM_152345 ANKRD13B 1 1.91 0.18 11 7.5 79.84 30 5.74 Yes 68 -2.06 No 0 0 No -26 0.63 No 44 70.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 70728487 - NM_030816 ANKRD13C 1 5.47 4.86 72 6.8 89.15 22 5.1 No 47 1.3 Yes 21 0.72 Yes -21 0.87 Yes 49 79.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 70728487 - NM_030816 ANKRD13C 1 0.92 0.82 37 6.8 89.15 22 5.1 No 47 1.3 Yes 21 0.72 Yes -21 0.87 Yes 49 79.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 70728487 - NM_030816 ANKRD13C 1 0.42 0.4 19 6.8 89.15 22 5.1 No 47 1.3 Yes 21 0.72 Yes -21 0.87 Yes 49 79.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 70757489 - NM_030816 ANKRD13C 1 0.42 0.42 21 7.53 81.27 19 4.61 No 36 0.01 No 0 0 No -22 0.59 No 48 68.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 70759304 - NM_030816 ANKRD13C 1 7.12 5.86 72 6.84 82.16 37 5.73 Yes 24 0.42 No 0 0 No -29 0.9 Yes 41 94.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 70771641 - NM_030816 ANKRD13C 1 1.67 1.47 54 7.12 88.24 32 5.66 Yes 19 0.49 No 27 0.58 Yes -31 0.69 Yes 39 70.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 70773053 - NM_030816 ANKRD13C 1 0.18 0.17 12 4.07 74.7 20 5.97 Yes 7 1.03 Yes 0 0 No -19 0.48 No 51 68.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 70774651 - NM_030816 ANKRD13C 1 0.18 0.17 10 7.86 83.6 28 5.14 No 22 -1.26 No 0 0 No -28 0.57 No 42 58.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 70781244 - NM_030816 ANKRD13C 1 0.18 0.14 8 0.19 0 15 3.7 No 59 0.11 No 0 0 No -37 0.4 No 42 66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 70782375 - NM_030816 ANKRD13C 1 0.58 0.47 27 0.11 61.2 22 4.99 No 72 -3.22 No 0 0 No -21 0.89 Yes 49 94.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 70799840 - NM_030816 ANKRD13C 1 1.77 1.71 51 7.97 75.77 21 6.52 Yes 8 1.08 Yes 0 0 No -24 0.48 No 46 68.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67057299 + NM_207354 ANKRD13D 1 8.87 1.81 55 8.56 83.85 30 5.48 No 27 1.13 Yes 29 0.76 Yes -29 0.71 Yes 43 39.9 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 67057778 + NM_207354 ANKRD13D 1 0.77 0.33 20 1.44 79.13 24 4.9 No 53 -3.33 No 19 0.95 Yes -23 0.93 Yes 47 71.02 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67057800 + NM_207354 ANKRD13D 1 0.53 0.22 13 0.58 0 16 4.12 No 75 -4.72 No 25 0.54 Yes -27 0.68 Yes 46 61.24 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 67058062 + NM_207354 ANKRD13D 1 13.53 3.75 71 6.75 80.94 27 5.44 No NA NA NA 27 0.46 Yes -27 0.45 No 43 60.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 67059090 + NM_207354 ANKRD13D 1 0.63 0.26 16 3.31 73.95 16 4.82 No 24 0.64 No 0 0 No -19 0.37 No 34 54.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67059467 + NM_207354 ANKRD13D 1 1.59 0.69 37 -10.46 0 9 3.87 No 31 1.45 Yes 0 0 No -43 0.9 Yes 27 89.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67064277 + NM_207354 ANKRD13D 1 0.33 0.11 8 8.04 87.15 18 5.39 No 5 1.12 Yes 0 0 No -17 0.59 No 53 83.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 67067503 + NM_207354 ANKRD13D 1 0.25 0.1 7 3.62 71.98 14 4.28 No 64 -4.13 No 0 0 No -23 0.67 Yes 51 56.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67068219 + NM_207354 ANKRD13D 1 0.71 0.32 20 6.79 84.52 30 5.83 Yes 59 -2.68 No 24 0.59 Yes -27 0.55 No 51 58.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 67068795 + NM_207354 ANKRD13D 1 0.65 0.38 21 5.72 77.71 48 7.07 Yes 35 0.99 Yes 0 0 No -20 0.52 No 23 66.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67069599 + NM_207354 ANKRD13D 1 0.69 0.29 16 -2.34 0 19 4.36 No 35 1.91 Yes 0 0 No -47 0.97 Yes 23 96.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 73951083 - NM_198889 ANKRD17 1 1.59 2.88 65 7.86 82.52 47 9.42 Yes 34 1.49 Yes 0 0 No -35 0.8 Yes 35 66.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 73961292 - NM_198889 ANKRD17 1 0.08 0.13 9 5.4 90.92 28 5.08 No 3 0.02 No 0 0 No -27 0.58 No 13 52.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 73966891 - NM_198889 ANKRD17 1 1.25 2.46 65 10.29 93.09 24 5.83 Yes 11 1.15 Yes 23 0.88 Yes -23 0.5 No 47 77.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 73975608 - NM_198889 ANKRD17 1 0.1 0.15 10 8.02 82.97 39 9.03 Yes 26 1.52 Yes 0 0 No -38 0.85 Yes 32 83.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 73979025 - NM_198889 ANKRD17 1 1 1.32 53 3.06 0 31 7.6 Yes 18 1.5 Yes 0 0 No -30 0.73 Yes 40 67.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 73979029 - NM_198889 ANKRD17 1 13.85 18.54 72 11.56 98.13 27 7.33 Yes 14 1.51 Yes 26 0.91 Yes -26 0.71 Yes 44 69.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 74000980 - NM_198889 ANKRD17 1 16.07 8.65 72 1.86 77.43 27 5.27 No 34 0.33 No 23 0.86 Yes -26 0.91 Yes 44 82.02 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 74006001 - NM_198889 ANKRD17 1 279.68 142.33 72 6.66 89.16 23 5.39 No 10 0.48 No 22 0.93 Yes -22 0.84 Yes 48 87.99 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 74008688 - NM_198889 ANKRD17 1 0.06 0.11 7 5.45 85.64 84 9.45 Yes 71 0.4 No 0 0 No -31 0.8 Yes 39 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 74013164 - NM_198889 ANKRD17 1 0.1 0.19 11 3.74 66.94 23 5.34 No 7 1.12 Yes 19 0.58 Yes -22 0.55 No 48 52.11 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 74017206 - NM_198889 ANKRD17 1 0.17 0.24 13 2.47 85.66 30 5.83 Yes 46 0.33 No 0 0 No -29 0.8 Yes 41 79.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 74029150 - NM_198889 ANKRD17 1 1.36 1.94 60 5.79 88.65 56 6.63 Yes 66 0.5 No 0 0 No -26 0.8 Yes 44 89.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 74034808 - NM_198889 ANKRD17 1 0.89 1.19 50 7.7 86.29 19 4.76 No 1 0.18 No 28 0.31 Yes -25 0.19 No 41 29.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 74123434 - NM_198889 ANKRD17 1 0.1 0.11 8 8.44 88.18 32 5.92 Yes 46 0.77 No 0 0 No -22 0.58 No 48 40.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 27300579 - NM_014915 ANKRD26 1 1.52 0.42 19 10.72 83.86 22 5.2 No 58 -3.21 No 0 0 No -26 0.79 Yes 44 78.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 27319530 - NM_014915 ANKRD26 1 2.01 0.82 36 6.01 80.15 37 6.32 Yes 39 1.47 Yes 0 0 No -23 0.85 Yes 47 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27322326 - NM_014915 ANKRD26 1 0.41 0.17 11 -0.46 69.28 23 4.24 No 40 0.83 Yes 21 0.4 Yes -25 0.37 No 44 28.79 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 27326712 - NM_014915 ANKRD26 1 0.35 0.13 8 5.55 79.41 81 7.29 Yes 41 1.08 Yes 0 0 No -20 0.42 No 39 66.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 27327012 - NM_014915 ANKRD26 1 0.42 0.19 12 4.86 75.97 26 6.04 Yes 13 0.83 Yes 23 0.67 Yes -31 0.35 No 37 73.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 27335450 - NM_014915 ANKRD26 1 94.99 29.17 72 0.24 73.24 77 10.27 Yes 64 1.5 Yes 0 0 No -36 0.68 Yes 39 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 27341074 - NM_014915 ANKRD26 1 18.53 4.35 70 2.82 78.73 32 6.79 Yes 19 1.29 Yes 0 0 No -42 0.55 No 28 63.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 27342031 - NM_014915 ANKRD26 1 1.14 0.21 11 8.38 85.14 33 5.96 Yes 20 1.7 Yes 0 0 No -32 0.82 Yes 38 93.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27366467 - NM_014915 ANKRD26 1 0.35 0.18 11 2.97 78.75 55 7.44 Yes 42 1.02 Yes 0 0 No -32 0.66 No 38 69.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 27368090 - NM_014915 ANKRD26 1 0.22 0.11 7 -2.88 0 31 4.55 No 18 1.16 Yes 0 0 No -30 0.69 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 27369083 - NM_014915 ANKRD26 1 0.34 0.19 12 0.51 83.28 33 6.16 Yes 40 0.12 No 0 0 No -32 0.51 No 38 50.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 27369701 - NM_014915 ANKRD26 1 0.79 0.47 25 6.03 0 15 4.55 No 61 -3.65 No 0 0 No -18 0.82 Yes 52 75.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 27373145 - NM_014915 ANKRD26 1 0.26 0.14 9 4.74 84.41 33 5.56 Yes 43 1.73 Yes 0 0 No -32 0.61 No 31 39.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 27375536 - NM_014915 ANKRD26 1 2.43 0.89 37 1.95 75.83 35 6.8 Yes 22 0.79 Yes 0 0 No -34 0.9 Yes 36 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27382011 - NM_014915 ANKRD26 1 0.89 0.29 17 2.9 0 30 5.9 Yes 17 0.21 No 0 0 No -29 0.77 Yes 41 79.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 27387256 - NM_014915 ANKRD26 1 0.94 0.31 17 8.66 92.55 69 7.52 Yes 8 1.42 Yes 0 0 No -20 0.86 Yes 50 83.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 33089281 - NM_032139 ANKRD27 1 2.69 2.13 61 2.6 0 25 6.7 Yes 71 0.33 No 0 0 No -24 0.69 Yes 46 50.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 33108536 - NM_032139 ANKRD27 1 1.54 0.79 35 0.31 0 28 9.19 Yes 15 1.85 Yes 0 0 No -27 0.84 Yes 43 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 33114848 - NM_032139 ANKRD27 1 0.29 0.21 11 6.55 81.1 21 5 No 8 0.76 No 0 0 No -20 0.95 Yes 50 96.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 33121058 - NM_032139 ANKRD27 1 0.17 0.14 9 12.52 97.68 28 5.39 No 31 0.93 Yes 0 0 No -27 0.94 Yes 43 95.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 33135383 - NM_032139 ANKRD27 1 0.83 0.61 26 1.68 81.42 25 6.4 Yes 12 2.35 Yes 21 0.91 Yes -24 0.88 Yes 46 91.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 33135383 - NM_032139 ANKRD27 1 0.26 0.18 10 1.68 81.42 25 6.4 Yes 12 2.35 Yes 21 0.91 Yes -24 0.88 Yes 46 91.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 33137461 - NM_032139 ANKRD27 1 0.2 0.13 8 11.03 85.63 34 5.68 Yes 68 1.05 Yes 0 0 No -33 0.46 No 37 62.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 33157511 - NM_032139 ANKRD27 1 0.16 0.13 8 8.43 82.25 28 6.56 Yes 15 1.2 Yes 0 0 No -27 0.9 Yes 43 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15711723 - NM_015199 ANKRD28 1 0.17 0.15 10 10.1 93.62 31 4.3 No 69 0.59 No 0 0 No -30 0.74 Yes 40 78.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 15714698 - NM_015199 ANKRD28 1 1.12 1.15 49 9.12 94.25 29 4.26 No 73 -4.54 No 0 0 No -28 0.94 Yes 42 96.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 15718219 - NM_015199 ANKRD28 1 0.2 0.15 10 5.99 83.39 48 8.23 Yes 29 1.46 Yes 0 0 No -24 0.27 No 46 48.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 15719068 - NM_015199 ANKRD28 1 0.55 0.5 26 -0.85 78.34 22 5.8 Yes 9 1.07 Yes 0 0 No -21 0.82 Yes 49 74.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15719135 - NM_015199 ANKRD28 1 0.61 0.63 30 7.38 89.19 40 6.63 Yes 27 0.21 No 23 0.81 Yes -39 0.43 No 33 34.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 15720875 - NM_015199 ANKRD28 1 0.32 0.35 19 -4.15 55.71 24 3.48 No 27 0.66 No 0 0 No -23 0.55 No 25 20.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 15726949 - NM_015199 ANKRD28 1 0.19 0.15 8 2.36 0 31 6.99 Yes 18 0.24 No 0 0 No -30 0.67 Yes 40 70.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 15736320 - NM_015199 ANKRD28 1 0.15 0.17 10 -10.58 0 29 6.97 Yes 16 1.3 Yes 0 0 No -28 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 15753756 - NM_015199 ANKRD28 1 0.21 0.24 15 3.04 62.39 29 7.37 Yes 16 1.02 Yes 29 0.37 Yes -28 0.42 No 38 58.38 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 15761213 - NM_015199 ANKRD28 1 0.7 0.63 34 4.07 70.75 16 7.13 Yes 75 -2.86 No 0 0 No -30 0.42 No 42 41.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 15766817 - NM_015199 ANKRD28 1 0.72 0.63 30 10.37 85.15 25 5.39 No 55 -2.64 No 0 0 No -24 0.63 No 48 80.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 15776297 - NM_015199 ANKRD28 1 0.49 0.42 19 8.11 87.16 27 5.53 No 68 -4.65 No 0 0 No -26 0.94 Yes 44 96.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 15810156 - NM_015199 ANKRD28 1 0.12 0.14 9 5.47 77.25 55 5.47 No 29 0.12 No 0 0 No -39 0.67 Yes 19 36.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 15822888 - NM_015199 ANKRD28 1 0.21 0.22 13 8.61 91.83 46 6.21 Yes 7 1.36 Yes 0 0 No -45 0.69 Yes 25 85.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15823163 - NM_015199 ANKRD28 1 0.33 0.4 20 6.91 90.93 20 6.85 Yes 60 1.44 Yes 27 0.56 Yes -27 0.44 No 43 47.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 15855817 - NM_015199 ANKRD28 1 25.02 5.78 72 10.68 96.23 21 6.34 Yes 50 0.65 No 20 0.28 Yes -38 0.46 No 32 61.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 15864887 - NM_015199 ANKRD28 1 0.51 0.14 9 5.87 84.96 32 6.67 Yes 19 0.86 Yes 0 0 No -31 0.71 Yes 39 76.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 21189256 - NM_173505 ANKRD29 1 6.74 0.46 24 11.87 91.79 18 5.8 Yes 5 1.01 Yes 18 0.51 Yes -18 0.57 No 42 55.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 21189256 - NM_173505 ANKRD29 1 2.65 0.15 10 11.87 91.79 18 5.8 Yes 5 1.01 Yes 18 0.51 Yes -18 0.57 No 42 55.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 10572819 + NM_001164440 ANKRD33B 1 0.26 0.39 22 9.29 89 24 6.93 Yes 11 1.22 Yes 0 0 No -23 0.89 Yes 47 85.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10607748 + NM_001164440 ANKRD33B 1 0.13 0.24 14 6.14 82.03 31 5.71 Yes 69 -3.2 No 0 0 No -30 0.71 Yes 40 77.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 10638069 + NM_001164440 ANKRD33B 1 0.15 0.29 16 14.28 89.05 26 5.29 No 13 1.84 Yes 0 0 No -25 0.84 Yes 45 91.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10619313 + NM_001164440 ANKRD33B 1 3.12 6.63 70 7.55 76.71 30 6.99 Yes 17 2.63 Yes 0 0 No -29 0.84 Yes 41 75.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10621189 + NM_001164440 ANKRD33B 1 0.12 0.19 12 9.46 91.83 20 9.48 Yes 7 1.9 Yes 0 0 No -23 0.71 Yes 47 47.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 10626777 + NM_001164440 ANKRD33B 1 0.63 1.4 40 7.92 75.77 36 6.47 Yes 48 0.2 No 0 0 No -27 0.76 Yes 43 80.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 10637703 + NM_001164440 ANKRD33B 1 0.05 0.11 7 12.32 88.51 19 6.18 Yes 6 1.17 Yes 0 0 No -27 0.52 No 43 66.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 10638069 + NM_001164440 ANKRD33B 1 0.62 1.19 43 14.28 89.05 26 5.29 No 13 1.84 Yes 0 0 No -25 0.84 Yes 45 91.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10638197 + NM_001164440 ANKRD33B 1 0.08 0.21 11 3.44 75.45 41 8.18 Yes 28 1.72 Yes 0 0 No -40 0.64 No 30 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 97784687 + NM_001164315 ANKRD36 1 2.1 0.18 9 2.97 67.48 27 5.98 Yes 14 0.07 No 0 0 No -32 0.74 Yes 38 69.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 97808679 + NM_001164315 ANKRD36 1 1.11 0.29 11 4.94 76.69 26 5.15 No 74 0.27 No 0 0 No -25 0.96 Yes 45 96.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 97808779 + NM_001164315 ANKRD36 1 5.23 1.36 21 10.28 85.63 22 4.78 No 61 -3.41 No 0 0 No -21 0.79 Yes 49 73.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 97824327 + NM_001164315 ANKRD36 1 2.64 0.47 23 4.37 78.75 22 9.25 Yes 9 1.06 Yes 0 0 No -32 0.73 Yes 38 72.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97830554 + NM_001164315 ANKRD36 1 1 0.13 7 8.36 83.81 32 7.28 Yes 43 0.87 Yes 0 0 No -31 0.76 Yes 39 85.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97890545 + NM_001164315 ANKRD36 1 0.82 0.11 7 4.73 88.06 22 4.96 No 53 1.98 Yes 28 0.82 Yes -25 0.8 Yes 45 68.19 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 97890545 + NM_001164315 ANKRD36 1 55.8 8.6 72 4.73 88.06 22 4.96 No 53 1.98 Yes 28 0.82 Yes -25 0.8 Yes 45 68.19 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 98164739 - NM_025190 ANKRD36B 1 1.17 0.17 9 2.75 75.49 26 5.73 Yes 39 -2.97 No 0 0 No -25 0.69 Yes 45 77.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 98200973 - NM_025190 ANKRD36B 1 0.71 0.13 9 1.07 65.62 28 6.06 Yes 15 0.08 No 0 0 No -33 0.72 Yes 37 69.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 89089570 + NR_015424 ANKRD36BP2 1 1.96 0.94 34 7.37 76.53 25 5.57 Yes 20 0.32 No 0 0 No -24 0.66 Yes 46 42.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 89091940 + NR_015424 ANKRD36BP2 1 6.28 3.72 52 1.68 83.24 23 5.03 No 37 1.72 Yes 0 0 No -26 0.78 Yes 44 72.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 96519606 - NM_001310154 ANKRD36C 1 1.64 0.21 15 -1.4 0 26 5.42 No 4 0.86 Yes 0 0 No -25 0.73 Yes 45 57.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 96610440 - NM_001310154 ANKRD36C 1 4.34 0.46 23 4.37 78.75 22 9.19 Yes 9 1.06 Yes 0 0 No -32 0.73 Yes 38 73.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186320100 + NM_181726 ANKRD37 1 1.43 0.61 30 1.28 0 19 4.05 No 20 0.6 No 22 0.8 Yes -18 0.86 Yes 52 72.21 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 97520351 - NM_016466 ANKRD39 1 2.12 0.71 31 8.85 86.91 31 5.81 Yes 18 1 Yes 0 0 No -30 0.84 Yes 40 87.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 48778013 - NM_052855 ANKRD40 1 0.26 0.24 16 4.56 76.81 28 5.5 No 76 0.13 No 0 0 No -27 0.79 Yes 43 60.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 48779370 - NM_052855 ANKRD40 1 2.68 2.4 58 5.25 73.79 28 5.52 No 15 0.55 No 0 0 No -28 0.62 No 42 89.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 197861074 - NM_001195144 ANKRD44 1 0.21 0.14 10 2.09 63.39 29 6.87 Yes 36 1.47 Yes 0 0 No -28 0.8 Yes 42 90.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 197862940 - NM_001195144 ANKRD44 1 0.11 0.1 7 4.35 86.54 23 4.66 No 45 0.95 Yes 0 0 No -23 0.63 No 47 61.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 197870568 - NM_001195144 ANKRD44 1 0.23 0.25 18 3.73 74.7 15 5.16 No 71 -5.26 No 0 0 No -27 0.55 No 43 59.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 197870625 - NM_001195144 ANKRD44 1 0.11 0.14 7 -2.47 0 13 3.89 No 67 0.92 Yes 0 0 No -45 0.76 Yes 25 72.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 197934690 - NM_001195144 ANKRD44 1 1.51 1.82 58 4.06 66.12 60 7.27 Yes 1 1.54 Yes 0 0 No -35 0.16 No 53 34.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 197942435 - NM_001195144 ANKRD44 1 1.02 1.21 47 11.65 98.1 19 5.57 Yes 6 0.39 No 0 0 No -25 0.41 No 52 42.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 197946453 - NM_001195144 ANKRD44 1 0.36 0.53 28 -2.67 75.71 34 7.78 Yes 45 1.14 Yes 36 0.63 Yes -33 0.84 Yes 37 89.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 197951445 - NM_001195144 ANKRD44 1 0.14 0.15 9 5.7 78.13 27 6.06 Yes 37 1.17 Yes 0 0 No -27 0.45 No 44 58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 197953553 - NM_001195144 ANKRD44 1 4.07 6.17 68 8.07 73.26 44 9.66 Yes 31 2.08 Yes 23 0.77 Yes -43 0.61 No 27 84.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 197981370 - NM_001195144 ANKRD44 1 0.3 0.43 23 4.05 83.28 21 4.8 No 8 0.14 No 0 0 No -20 0.61 No 50 73.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 198006975 - NM_001195144 ANKRD44 1 0.97 1.57 53 9.29 82.35 41 5.68 Yes 39 1.11 Yes 0 0 No -37 0.43 No 33 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 198039008 - NM_001195144 ANKRD44 1 0.29 0.42 21 9.01 86.24 33 5.98 Yes 74 0.41 No 0 0 No -32 0.85 Yes 38 85.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 101544689 - NM_001270378 ANKRD46 1 7.25 5.43 71 1.98 0 61 6.96 Yes 74 0.88 Yes 25 0.03 Yes -60 0.84 Yes 10 77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 94231067 + NM_017704 ANKRD49 1 1.63 0.93 39 3.34 75.65 22 6.01 Yes 9 1.95 Yes 21 0.92 Yes -27 0.6 No 43 77.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 56637342 - NM_173595 ANKRD52 1 0.12 0.13 8 5.51 65.17 33 6.86 Yes 20 1.45 Yes 0 0 No -32 0.3 No 38 60.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56637465 - NM_173595 ANKRD52 1 0.5 0.54 25 6.89 84.5 32 7.1 Yes 27 1.07 Yes 0 0 No -31 0.43 No 38 53.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56642674 - NM_173595 ANKRD52 1 0.11 0.11 8 7.63 81.14 43 7 Yes NA NA NA 23 0.94 Yes -40 0.42 No 30 67.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56643524 - NM_173595 ANKRD52 1 0.18 0.17 11 4.45 85.02 17 5.39 No 4 1.24 Yes 0 0 No -22 0.7 Yes 48 68.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 56644501 - NM_173595 ANKRD52 1 0.39 0.33 18 8.74 85.76 54 8.96 Yes 41 0.88 Yes 0 0 No -53 0.82 Yes 17 86.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56646712 - NM_173595 ANKRD52 1 0.17 0.18 10 4.73 74.32 33 6.02 Yes -1 0.34 No 25 0.9 Yes -10 0.48 No 37 51.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56651513 - NM_173595 ANKRD52 1 0.6 0.61 30 9.3 84.95 35 8.94 Yes NA NA NA 0 0 No -34 0.57 No 36 85.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 38229758 - NR_036556 ANKRD54 1 2.11 0.58 30 6.67 0 36 6.15 Yes 56 -3.9 No 30 0.28 Yes -33 0.67 Yes 37 73.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38229985 - NR_036556 ANKRD54 1 0.72 0.18 9 5.65 73.04 33 7.09 Yes 6 0.78 Yes 0 0 No -33 0.7 Yes 37 84.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34940357 + NM_015245 ANKS1A 1 7.13 1.67 52 11.22 83.67 29 7.37 Yes 40 1.16 Yes 0 0 No -31 0.84 Yes 39 86.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34950474 + NM_015245 ANKS1A 1 0.7 0.15 8 3.82 73.51 44 7.75 Yes 57 0.6 No 0 0 No -43 0.81 Yes 27 83.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 34965486 + NM_015245 ANKS1A 1 0.71 0.14 8 10.48 84.01 26 5.66 Yes 43 0.49 No 0 0 No -25 0.85 Yes 45 84.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 34973477 + NM_015245 ANKS1A 1 1.15 0.15 9 6.56 83.39 32 4.21 No 12 0.23 No 0 0 No -24 0.61 No 42 52.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35051894 + NM_015245 ANKS1A 1 5.7 1.31 49 0.13 77 20 5.1 No 65 -4.12 No 30 0.41 Yes -19 0.44 No 43 31.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 4751647 - NM_133450 ANKS3 1 3.42 0.24 14 -3.38 0 19 4.57 No 32 -4.33 No 20 0.65 Yes -19 0.75 Yes 51 33.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 4752239 - NM_133450 ANKS3 1 0.97 0.14 10 -3.43 0 28 6.43 Yes 76 0.74 No 22 0.91 Yes -27 0.96 Yes 43 90.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4757093 - NM_133450 ANKS3 1 1.91 0.22 14 10.14 89.51 30 6.73 Yes 40 1.4 Yes 0 0 No -29 0.97 Yes 41 96.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4767555 - NM_133450 ANKS3 1 6.53 0.74 37 0.98 83.92 27 4.48 No 42 0.16 No 27 0.79 Yes -27 0.73 Yes 43 83.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4776778 - NM_133450 ANKS3 1 2.34 0.14 7 -0.21 0 30 6.62 Yes 17 1.69 Yes 26 0.85 Yes -29 0.7 Yes 41 80.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4776856 - NM_133450 ANKS3 1 56.51 2.25 60 8.28 88.21 21 5.68 Yes 8 0.91 Yes 20 0.54 Yes -26 0.45 No 53 68.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 220097810 + NM_001042410 ANKZF1 1 0.33 0.15 9 -0.02 0 17 4.06 No 17 1.81 Yes 0 0 No -45 0.57 No 25 72.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 220098010 + NM_001042410 ANKZF1 1 0.55 0.25 15 0.18 66.44 22 5.29 No 61 -4.88 No 0 0 No -21 0.83 Yes 49 76.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 220098857 + NM_001042410 ANKZF1 1 2.71 1.21 49 -2.72 71.72 29 5.57 Yes -2 -1.45 No 0 0 No -28 0.84 Yes 42 74.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 220099553 + NM_001042410 ANKZF1 1 0.39 0.15 9 0.07 0 9 3.87 No 58 0.67 No 0 0 No -27 0.89 Yes 43 71.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 220100182 + NM_001042410 ANKZF1 1 1.15 0.32 18 -10.37 71.49 16 5.13 No 3 0.48 No 28 0.25 Yes -21 0.66 No 49 61.13 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 36438827 + NM_001284302 ANLN 1 0.98 0.35 20 10.28 90.83 19 4.9 No 74 0.58 No 0 0 No -19 0.56 No 51 57.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 36460220 + NM_001284302 ANLN 1 2.31 1.26 44 0.89 69.39 19 4.9 No 18 1.24 Yes 25 0.96 Yes -40 0.62 No 30 69.27 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 36464924 + NM_001284302 ANLN 1 0.29 0.18 13 3.97 84.41 27 6.23 Yes 14 1.29 Yes 0 0 No -26 0.91 Yes 44 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 36467915 + NM_001284302 ANLN 1 6.15 1.9 46 12.92 84.7 45 7.36 Yes 73 1.33 Yes 44 0.4 Yes -44 0.89 Yes 26 92.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 36473941 + NM_001284302 ANLN 1 1.18 0.33 21 8.03 82.67 25 4.95 No 45 -1.94 No 0 0 No -22 0.9 Yes 48 87.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 43488893 - NM_001346467 ANO10 1 0.53 0.29 15 7.22 81.32 30 5.37 No 12 0.93 Yes 0 0 No -29 0.37 No 41 65.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 43554501 - NM_001346467 ANO10 1 0.6 0.28 16 8.51 80.36 39 5.27 No 38 1.19 Yes 0 0 No -32 0.85 Yes 38 94.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 43556502 - NM_001346467 ANO10 1 0.43 0.19 12 9.7 85.02 87 7.57 Yes 57 0.83 Yes 0 0 No -32 0.93 Yes 38 92.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 43578161 - NM_001346467 ANO10 1 0.39 0.25 13 7.39 74.93 24 4.06 No 56 0.22 No 0 0 No -27 0.34 No 47 39.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 43602818 - NM_001346467 ANO10 1 0.21 0.15 9 6.86 77.55 42 5.23 No 47 0.96 Yes 0 0 No -41 0.54 No 29 78.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 22232812 + NM_213599 ANO5 1 0.86 0.21 11 3.48 75.1 38 4.64 No 62 0.6 No 0 0 No -37 0.49 No 33 58.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 22232812 + NM_213599 ANO5 1 52.24 15.35 71 3.48 75.1 38 4.64 No 62 0.6 No 0 0 No -37 0.49 No 33 58.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 22243004 + NM_213599 ANO5 1 0.3 0.18 11 7.1 82.79 18 5.19 No 31 2.06 Yes 0 0 No -43 0.6 No 27 79.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 22255631 + NM_213599 ANO5 1 1.84 0.72 33 10.01 95.9 21 4.5 No 34 0.75 No 0 0 No -24 0.82 Yes 46 81.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 22283770 + NM_213599 ANO5 1 0.66 0.33 16 6.08 75.16 18 5.57 Yes 5 1.16 Yes 0 0 No -36 0.4 No 42 61.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 22297645 + NM_213599 ANO5 1 0.39 0.18 11 0.83 0 16 3.85 No 37 1.39 Yes 0 0 No -50 0.7 Yes 20 80.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 22299331 + NM_213599 ANO5 1 0.56 0.24 13 7.8 86.05 69 7.47 Yes 8 0.69 No 33 0.43 Yes -33 0.81 Yes 37 77.68 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 45621950 + NM_001025356 ANO6 1 5.62 2.99 64 7.36 93.98 24 5.29 No 11 0.73 No 23 0.92 Yes -23 0.92 Yes 47 89.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 45664244 + NM_001025356 ANO6 1 20.24 10.99 72 10.73 91.33 55 7.67 Yes 42 1.79 Yes 23 0.65 Yes -23 0.93 Yes 47 93.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 45676117 + NM_001025356 ANO6 1 0.19 0.11 7 4.21 75.36 20 5.09 No 60 -2.54 No 0 0 No -26 0.53 No 44 61.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 45725081 + NM_001025356 ANO6 1 0.23 0.18 13 -3.84 0 38 6.04 Yes 57 0.29 No 0 0 No -28 0.69 Yes 35 49.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 45706981 + NM_001025356 ANO6 1 1.85 1.42 50 10.73 90.02 25 5.15 No 35 0.74 No 24 0.83 Yes -24 0.9 Yes 46 94.78 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 45716700 + NM_001025356 ANO6 1 0.34 0.22 14 7.59 82.7 25 5.36 No 33 0.71 No 0 0 No -24 0.51 No 46 50.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 45725081 + NM_001025356 ANO6 1 0.45 0.35 19 -3.84 0 38 6.04 Yes 57 0.29 No 0 0 No -28 0.69 Yes 35 49.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 45735818 + NM_001025356 ANO6 1 0.16 0.14 9 11.78 80.69 28 5.74 Yes 15 0.51 No 0 0 No -26 0.41 No 44 55.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 45749296 + NM_001025356 ANO6 1 0.8 0.47 24 5.55 85.16 34 6.25 Yes 21 0.69 No 0 0 No -33 0.77 Yes 37 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 45753009 + NM_001025356 ANO6 1 0.34 0.14 9 10.16 89.69 24 6.93 Yes 11 1.84 Yes 0 0 No -23 0.88 Yes 47 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 45764609 + NM_001025356 ANO6 1 0.34 0.25 17 2.95 84.79 16 5.83 Yes 65 -1.79 No 0 0 No -19 0.72 Yes 51 62.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 45764618 + NM_001025356 ANO6 1 0.71 0.58 32 0.89 0 12 4.24 No -1 0.04 No 0 0 No -28 0.73 Yes 46 67.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 45776977 + NM_001025356 ANO6 1 0.16 0.13 9 7.62 90.49 22 5.19 No 67 1.21 Yes 21 0.81 Yes -21 0.81 Yes 44 74.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 45816382 + NM_001025356 ANO6 1 0.27 0.15 11 3.42 0 26 6.15 Yes 13 0.98 Yes 0 0 No -25 0.43 No 38 49.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 45817826 + NM_001025356 ANO6 1 1 0.64 36 8.61 84.6 31 5.66 Yes 18 0.58 No 0 0 No -30 0.83 Yes 40 91.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 45825032 + NM_001025356 ANO6 1 0.3 0.19 14 7.83 87.65 25 5.48 No 12 0.79 Yes 0 0 No -24 0.91 Yes 46 87.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 418808 - NM_001347882 ANO9 1 0.78 0.24 14 0.61 0 14 3.87 No 25 2.12 Yes 0 0 No -30 0.83 Yes 40 87.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 421079 - NM_001347882 ANO9 1 0.56 0.22 12 9.02 82.17 29 4.24 No 0 2.43 Yes 24 0.88 Yes -28 0.81 Yes 42 86.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 422104 - NM_001347882 ANO9 1 1 0.25 15 10.43 86.5 34 8.85 Yes 21 1.47 Yes 0 0 No -33 0.55 No 37 67.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 424072 - NM_001347882 ANO9 1 2.69 0.63 31 1.59 73.02 22 4.44 No 38 -2.79 No 0 0 No -26 0.57 No 44 54.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 424188 - NM_001347882 ANO9 1 12.01 3.13 62 6.1 69.31 26 6.01 Yes 61 0.77 No 0 0 No -25 0.84 Yes 45 79.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 424188 - NM_001347882 ANO9 1 1.78 0.32 18 6.1 69.31 26 6.01 Yes 61 0.77 No 0 0 No -25 0.84 Yes 45 79.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 425318 - NM_001347882 ANO9 1 0.84 0.25 15 6.8 90.77 23 3.61 No 59 0.34 No 0 0 No -21 0.85 Yes 49 93.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 427565 - NM_001347882 ANO9 1 0.43 0.11 8 5.52 80.56 20 5.56 Yes 76 1.07 Yes 0 0 No -19 0.73 Yes 51 87.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 428138 - NM_001347882 ANO9 1 0.73 0.19 12 6.7 85.4 25 6.08 Yes 12 1.06 Yes 0 0 No -24 0.87 Yes 46 86.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 428230 - NM_001347882 ANO9 1 1.75 0.51 28 3.34 84.51 21 5.2 No 68 -2.15 No 19 0.52 Yes -24 0.86 Yes 50 39.59 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 428248 - NM_001347882 ANO9 1 2.44 0.63 30 7.98 87.64 14 5.43 No 50 -2.16 No 0 0 No -29 0.37 No 51 40.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 429680 - NM_001347882 ANO9 1 1.07 0.21 12 -1.6 0 30 4.53 No 63 -0.55 No 25 0.77 Yes -25 0.23 No 41 28.42 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 429859 - NM_001347882 ANO9 1 1.71 0.28 15 9.61 76.89 19 8.46 Yes 6 1.83 Yes 37 0.54 Yes -18 0.88 Yes 52 89.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 430126 - NM_001347882 ANO9 1 0.69 0.21 12 4.39 70.62 24 6.34 Yes 11 1.22 Yes 19 0.5 Yes -23 0.83 Yes 47 66.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 431768 - NM_001347882 ANO9 1 0.79 0.14 8 1.36 0 22 8 Yes 9 1.59 Yes 21 0.81 Yes -21 0.83 Yes 49 85.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 431905 - NM_001347882 ANO9 1 1.18 0.14 9 -6.76 68.22 26 5.21 No 23 1.25 Yes 0 0 No -25 0.9 Yes 45 67.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 432049 - NM_001347882 ANO9 1 29.11 2.75 67 0.35 0 9 3.87 No 24 0.45 No 0 0 No -36 0.71 Yes 34 85.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 69072479 - NM_006305 ANP32A 1 0.2 1.04 41 1.48 78.1 33 6.83 Yes 66 1.87 Yes 0 0 No -32 0.34 No 38 76.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 69072810 - NM_006305 ANP32A 1 0.13 0.32 20 -1.93 82.62 32 7.07 Yes 19 1.31 Yes 28 0.88 Yes -31 0.94 Yes 39 93.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 69075402 - NM_006305 ANP32A 1 0.04 0.19 12 3.22 0 32 5.66 Yes 19 1.19 Yes 40 0.57 Yes -31 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 69076933 - NM_006305 ANP32A 1 0.02 0.24 17 -13.02 0 31 7.22 Yes 76 0.95 Yes 0 0 No -30 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 100751247 + NM_006401 ANP32B 1 0.03 0.25 15 8.16 88.75 34 6.99 Yes 21 0.99 Yes 0 0 No -33 0.67 Yes 37 75.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100759646 + NM_006401 ANP32B 1 0.01 0.13 8 7.49 89.77 29 6.32 Yes 16 2.19 Yes 0 0 No -28 0.72 Yes 42 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100764557 + NM_006401 ANP32B 1 0.09 1.5 48 7.3 92.38 27 6.68 Yes 8 0.51 No 26 0.54 Yes -26 0.69 Yes 44 63.56 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 100767216 + NM_006401 ANP32B 1 0.04 0.68 34 8.13 85.43 18 6.12 Yes 9 0.24 No 28 0.57 Yes -28 0.39 No 49 61.63 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 100767246 + NM_006401 ANP32B 1 0.02 0.28 19 -11.84 0 16 5.99 Yes 3 0.8 Yes 0 0 No -32 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 100767290 + NM_006401 ANP32B 1 0.03 0.44 27 0.6 78.5 28 5.57 Yes 47 0.76 No 0 0 No -27 0.78 Yes 62 44.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 100769783 + NM_006401 ANP32B 1 0.26 2.44 62 6.65 84.82 44 8.06 Yes 31 0.19 No 0 0 No -30 0.73 Yes 40 54.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 100769915 + NM_006401 ANP32B 1 0.03 0.26 15 5.55 77.86 31 6.85 Yes 18 0.44 No 0 0 No -30 0.79 Yes 40 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 100773555 + NM_006401 ANP32B 1 0.21 1.92 58 -0.55 78.53 30 5.9 Yes 53 0.77 Yes 0 0 No -30 0.6 No 40 70.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 100777676 + NM_006401 ANP32B 1 0.02 0.14 7 -23.63 0 14 3.59 No 68 0.51 No 0 0 No -55 0.73 Yes 15 50.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 100777060 + NM_006401 ANP32B 1 0.04 0.22 13 1.78 0 31 6.08 Yes 76 -4.38 No 0 0 No -33 0.74 Yes 37 91.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 100777079 + NM_006401 ANP32B 1 0.11 0.67 32 6.68 90.14 10 5.29 No 74 -2.45 No 0 0 No -25 0.59 No 49 58.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 100777371 + NM_006401 ANP32B 1 0.03 0.18 12 2.38 68.04 24 3.82 No 51 -4.73 No 0 0 No -26 0.6 No 44 61.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 100777624 + NM_006401 ANP32B 1 0.05 0.29 15 4.03 70.59 34 5.77 Yes 61 1.43 Yes 24 0.8 Yes -28 0.78 Yes 42 89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 100777647 + NM_006401 ANP32B 1 0.02 0.14 8 -6.42 71.73 27 5.6 Yes 39 0.57 No 0 0 No -26 0.79 Yes 44 68.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 150193061 - NM_001136478 ANP32E 1 6.74 27 72 0.44 69.61 42 5.21 No 73 1.33 Yes 32 0.74 Yes -35 0.72 Yes 35 81.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150193061 - NM_001136478 ANP32E 1 0.07 0.26 18 0.44 69.61 42 5.21 No 73 1.33 Yes 32 0.74 Yes -35 0.72 Yes 35 81.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150195621 - NM_001136478 ANP32E 1 1.31 6.21 70 -8.69 0 43 6.63 Yes 30 1.15 Yes 42 0.3 Yes -42 0.88 Yes 28 87.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150204258 - NM_001136478 ANP32E 1 0.03 0.15 9 -3.97 0 12 4 No 13 1.04 Yes 0 0 No -29 0.57 No 41 48.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 81915665 - NM_001278408 ANXA11 1 0.05 0.18 12 -11.99 0 34 6.46 Yes 21 1.3 Yes 0 0 No -33 0.69 Yes 37 84.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 81916255 - NM_001278408 ANXA11 1 0.94 3.38 69 3.34 81.2 15 4.99 No 41 0.6 No 21 0.28 Yes -19 0.18 No 56 35.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 81918951 - NM_001278408 ANXA11 1 0.04 0.22 12 -12.83 0 27 5.24 No 9 0.23 No 0 0 No -26 0.43 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 81933133 - NM_001278408 ANXA11 1 0.05 0.11 7 7.71 83.39 18 5.82 Yes 74 0.88 Yes 0 0 No -29 0.48 No 50 37.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 81933158 - NM_001278408 ANXA11 1 0.33 0.78 40 8.6 91.39 21 5.2 No 59 1.3 Yes 0 0 No -20 0.8 Yes 50 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 60677830 - NM_004039 ANXA2 1 0.24 1.42 36 7.73 84.44 28 7.07 Yes 15 1.28 Yes 0 0 No -27 0.87 Yes 43 92.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 60682517 - NM_004039 ANXA2 1 0.25 1.03 44 8.33 92 16 5.39 No 46 0.91 Yes 24 0.71 Yes -24 0.6 No 46 39.61 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 60685640 - NM_004039 ANXA2 1 0.17 0.67 27 5.99 90.32 22 4.8 No 9 1.46 Yes 21 0.96 Yes -21 0.82 Yes 49 96.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 60688627 - NM_004039 ANXA2 1 0.18 0.76 31 8.11 75.96 82 5.9 Yes 38 0.8 Yes 31 0.67 Yes -31 0.66 No 39 83.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 60689538 - NM_004039 ANXA2 1 16.68 65.89 72 8.33 81.97 28 5.15 No 15 0.38 No 27 0.54 Yes -27 0.6 No 50 35.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 70009887 + NM_001320698 ANXA4 1 0.36 1 43 7.29 86.53 25 5.26 No 12 0.51 No 0 0 No -24 0.92 Yes 46 95.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 70009890 + NM_001320698 ANXA4 1 0.04 0.14 9 7.41 89.25 28 5.53 No 15 0.51 No 0 0 No -27 0.92 Yes 43 95.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 70014041 + NM_001320698 ANXA4 1 0.05 0.17 8 8.61 81.08 23 5.83 Yes 10 0.97 Yes 0 0 No -22 0.66 Yes 48 83.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 70016355 + NM_001320698 ANXA4 1 0.27 1.07 47 5.8 79.96 29 5.48 No 16 0.16 No 0 0 No -23 0.68 Yes 47 83.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 70030524 + NM_001320698 ANXA4 1 0.3 1.29 49 5.62 73.97 26 5.13 No 13 1.08 Yes 25 0.73 Yes -25 0.64 No 38 42.4 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 70038465 + NM_001320698 ANXA4 1 0.22 0.67 32 0.34 74.88 23 5.83 Yes 4 0.09 No 25 0.68 Yes -20 0.51 No 48 80.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 70044124 + NM_001320698 ANXA4 1 0.29 0.79 32 6.04 87.11 19 4.9 No -2 0.51 No 0 0 No -18 0.6 No 52 61.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 70044135 + NM_001320698 ANXA4 1 0.05 0.11 7 2.88 0 19 4.44 No 9 0.49 No 0 0 No -29 0.53 No 41 60.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 122590876 - NM_001154 ANXA5 1 0.05 0.26 16 -7.99 0 41 6.71 Yes 70 1.17 Yes 0 0 No -37 0.47 No 30 79.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 122591378 - NM_001154 ANXA5 1 0.1 0.69 23 8.11 88.03 24 6.93 Yes 11 0.6 No 0 0 No -23 0.87 Yes 47 82.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 122592771 - NM_001154 ANXA5 1 0.02 0.15 9 1.21 76.12 22 4.99 No 26 -0.97 No 0 0 No -21 0.91 Yes 49 80.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 122593770 - NM_001154 ANXA5 1 0.07 0.38 18 3.65 0 16 4.58 No 58 -2.74 No 0 0 No -34 0.94 Yes 36 95.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 122598248 - NM_001154 ANXA5 1 0.02 0.13 8 7.78 87.19 34 6.38 Yes 38 -1.55 No 0 0 No -25 0.66 No 45 57.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 122599649 - NM_001154 ANXA5 1 0.02 0.13 7 -14.72 0 25 3.63 No 54 0.43 No 0 0 No -28 0.36 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 122601964 - NM_001154 ANXA5 1 0.1 0.56 29 10.11 90.59 31 6.34 Yes 18 1.5 Yes 0 0 No -30 0.72 Yes 40 75.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 122605921 - NM_001154 ANXA5 1 0.07 0.22 12 -3.15 0 15 3.87 No 73 -4.48 No 0 0 No -27 0.58 No 43 78.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 122617804 - NM_001154 ANXA5 1 0.03 0.1 7 -3.92 54 22 5.11 No 52 -0.11 No 26 0.94 Yes -15 0.33 No 61 24.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 150483204 - NM_001155 ANXA6 1 0.01 0.14 9 3.58 75.04 24 5.19 No 11 0.33 No 0 0 No -23 0.91 Yes 47 92.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 150485984 - NM_001155 ANXA6 1 0.1 1.19 48 10.44 91.42 19 5.74 Yes 6 0.72 No 0 0 No -27 0.63 No 52 63.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 150488104 - NM_001155 ANXA6 1 0.01 0.13 7 1.3 0 11 4.12 No 28 1.56 Yes 0 0 No -40 0.86 Yes 30 95.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 150489398 - NM_001155 ANXA6 1 0.01 0.13 9 -8.12 0 14 4.36 No 41 1.31 Yes 0 0 No -53 0.85 Yes 17 67.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 150489401 - NM_001155 ANXA6 1 0.02 0.28 17 -7.77 0 11 4 No 38 1.31 Yes 0 0 No -50 0.82 Yes 20 75.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 150496745 - NM_001155 ANXA6 1 0.01 0.11 8 -0.12 0 23 7.28 Yes 10 1.41 Yes 25 0.92 Yes -22 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 150501881 - NM_001155 ANXA6 1 0.01 0.15 7 -0.65 0 38 7.2 Yes 25 1.5 Yes 0 0 No -37 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 150502530 - NM_001155 ANXA6 1 0.02 0.31 18 1.7 70.91 38 6.31 Yes 55 -3.64 No 0 0 No -23 0.66 No 33 43.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 150503701 - NM_001155 ANXA6 1 0.01 0.29 12 3.87 74.49 24 4.76 No 6 0.5 No 0 0 No -23 0.83 Yes 52 62.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 150503985 - NM_001155 ANXA6 1 0.01 0.11 7 6.98 82.36 31 6.06 Yes 68 1.22 Yes 0 0 No -30 0.63 No 40 78.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 150506057 - NM_001155 ANXA6 1 0.05 0.72 35 3.55 0 26 6.43 Yes 13 1.23 Yes 40 0.48 Yes -25 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 150506069 - NM_001155 ANXA6 1 0.04 0.5 31 -1.95 0 14 5.53 No 1 1.09 Yes 40 0.48 Yes -22 0.54 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 150509041 - NM_001155 ANXA6 1 0.01 0.14 9 5.17 71.16 24 7.66 Yes 72 0.6 No 23 0.88 Yes -23 0.9 Yes 47 92.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 150512131 - NM_001155 ANXA6 1 0.01 0.18 12 -19.66 0 32 6.92 Yes -4 1.4 Yes 0 0 No -31 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 150517539 - NM_001155 ANXA6 1 0.11 1.94 56 8.27 88.62 21 5.91 Yes 8 0.99 Yes 0 0 No -20 0.83 Yes 50 88.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 150518097 - NM_001155 ANXA6 1 0.04 0.75 26 4.45 79.37 13 5.36 No 48 0.76 No 0 0 No -25 0.9 Yes 45 85.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 150519005 - NM_001155 ANXA6 1 0.02 0.28 15 1.57 0 28 4.67 No 12 0.69 No 0 0 No -24 0.73 Yes 46 68.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 150522036 - NM_001155 ANXA6 1 0.04 0.54 26 3.01 0 36 7.05 Yes 23 1.83 Yes 0 0 No -35 0.6 No 35 75.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 150535263 - NM_001155 ANXA6 1 0.16 1.47 51 10.67 83.27 26 7.53 Yes 13 1.02 Yes 25 0.91 Yes -25 0.89 Yes 45 62.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 75135809 - NM_001320879 ANXA7 1 0.13 0.5 27 5.06 80.83 25 5.86 Yes 67 0.11 No 0 0 No -24 0.78 Yes 46 85.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 75137301 - NM_001320879 ANXA7 1 0.09 0.32 20 4.42 84.17 27 5.2 No 65 1.12 Yes 0 0 No -26 0.61 No 11 65.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75137325 - NM_001320879 ANXA7 1 0.08 0.32 17 4.74 84.41 54 4.72 No 41 1.13 Yes 40 0.44 Yes -40 0.58 No 30 57.64 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 75138777 - NM_001320879 ANXA7 1 0.15 0.97 39 1.04 0 37 6.34 Yes 12 0.93 Yes 0 0 No -24 0.45 No 39 69.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 75147536 - NM_001320879 ANXA7 1 0.37 2.06 59 0.59 0 9 3.87 No 14 -1.84 No 0 0 No -27 0.65 No 39 90.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 75149807 - NM_001320879 ANXA7 1 0.04 0.26 14 7.67 82.71 14 4.87 No 1 1.21 Yes 0 0 No -20 0.61 No 48 68.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75155868 - NM_001320879 ANXA7 1 0.26 1.54 55 12.2 89.07 21 7.38 Yes 8 1.14 Yes 29 0.86 Yes -29 0.73 Yes 41 73.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 75157024 - NM_001320879 ANXA7 1 0.6 2.49 63 5.37 0 12 4.24 No 15 1.32 Yes 0 0 No -27 0.85 Yes 43 72.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 75158137 - NM_001320879 ANXA7 1 0.67 0.13 7 3.74 0 17 4 No 75 1.81 Yes 0 0 No -29 0.59 No 41 78.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 75159553 - NM_001320879 ANXA7 1 0.84 0.15 10 6.74 84.41 26 5.1 No 46 0.25 No 0 0 No -58 0.72 Yes 12 83.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 75160616 - NM_001320879 ANXA7 1 1273.46 273.79 72 7.85 89.16 30 5.66 Yes 76 0.6 No 29 0.87 Yes -29 0.94 Yes 41 98.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 75168044 - NM_001320879 ANXA7 1 2.48 0.57 28 -9.99 76.25 127 10.86 Yes -4 -0.5 No 0 0 No -68 0.1 No 11 17.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 75168162 - NM_001320879 ANXA7 1 9.54 1.99 57 7.14 82.16 25 8.67 Yes 41 1.1 Yes 0 0 No -28 0.55 No 42 65.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 113179488 + NM_001128426 AP1AR 1 1.76 0.88 37 6.92 81.43 18 7.6 Yes 5 0.99 Yes 0 0 No -28 0.34 No 46 53.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 113186458 + NM_001128426 AP1AR 1 0.49 0.46 20 7.73 80.89 25 5.22 No 29 1.53 Yes 0 0 No -24 0.6 No 46 55.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29726520 - NM_001127 AP1B1 1 0.07 0.22 14 -9.04 66.39 36 7.48 Yes -1 0.45 No 0 0 No -22 0.76 Yes 35 77.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29727571 - NM_001127 AP1B1 1 0.04 0.11 7 4.24 75.21 22 5.65 Yes 9 1.46 Yes 25 0.92 Yes -25 0.85 Yes 49 78.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29730340 - NM_001127 AP1B1 1 4.75 10.13 72 6.43 87.86 20 5.1 No -3 0.4 No 19 0.67 Yes -19 0.91 Yes 51 89.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29732766 - NM_001127 AP1B1 1 0.24 0.53 30 7.37 90.14 28 5.29 No 38 1.11 Yes 0 0 No -50 0.56 No 20 96.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29737743 - NM_001127 AP1B1 1 0.03 0.1 7 -4.49 0 13 3.99 No 69 0.48 No 0 0 No -32 0.85 Yes 38 80.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29746320 - NM_001127 AP1B1 1 0.06 0.14 8 7.01 74.5 26 5.88 Yes 13 1.11 Yes 0 0 No -25 0.77 Yes 45 82.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29747409 - NM_001127 AP1B1 1 0.1 0.36 19 10.28 97.68 21 5.2 No 73 0.56 No 20 0.34 Yes -20 0.6 No 50 75.87 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 29750794 - NM_001127 AP1B1 1 0.08 0.22 15 5.13 81.12 52 6.51 Yes 39 0.39 No 0 0 No -29 0.73 Yes 41 77.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29750794 - NM_001127 AP1B1 1 0.12 0.35 16 5.13 81.12 52 6.51 Yes 39 0.39 No 0 0 No -29 0.73 Yes 41 77.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29750913 - NM_001127 AP1B1 1 0.05 0.14 8 0.94 62.57 41 7.77 Yes -1 0.3 No 0 0 No -27 0.55 No 59 27.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29752525 - NM_001127 AP1B1 1 0.16 0.42 24 6.5 73.68 24 5.81 Yes -3 0.35 No 0 0 No -24 0.8 Yes 46 61.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29754462 - NM_001127 AP1B1 1 0.06 0.15 10 6.69 88.19 22 5.29 No 47 1.66 Yes 0 0 No -21 0.56 No 49 74.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29762914 - NM_001127 AP1B1 1 0.04 0.11 7 9.14 98.34 18 7.19 Yes 2 0.3 No 0 0 No -23 0.93 Yes 47 90.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29763257 - NM_001127 AP1B1 1 0.39 1.15 45 1.15 72.94 34 4.26 No 15 1.06 Yes 25 0.86 Yes -27 0.66 No 43 62.71 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 29765379 - NM_001127 AP1B1 1 0.2 0.64 31 10.47 96.71 27 5.62 Yes 14 0.83 Yes 0 0 No -30 0.7 Yes 40 66.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 71767057 - NM_001030007 AP1G1 1 0.16 0.29 14 1.46 0 11 3.87 No 21 0.4 No 0 0 No -33 0.62 No 37 71.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 71767096 - NM_001030007 AP1G1 1 0.06 0.13 9 1.65 0 19 4.58 No 71 0.48 No 28 0.65 Yes -21 0.37 No 49 44.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 71779528 - NM_001030007 AP1G1 1 0.25 0.58 25 2.55 83.86 26 5 No 40 0.53 No 20 0.75 Yes -25 0.9 Yes 45 90.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 71784232 - NM_001030007 AP1G1 1 0.25 0.44 24 1.52 0 26 6.24 Yes 51 1.95 Yes 0 0 No -25 0.89 Yes 45 81.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 71786022 - NM_001030007 AP1G1 1 0.08 0.14 9 7.05 84.47 59 5.02 No 32 1.79 Yes 0 0 No -26 0.64 No 44 70.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 71797549 - NM_001030007 AP1G1 1 0.11 0.24 12 9.39 83.75 28 5.14 No 25 0.74 No 0 0 No -27 0.64 No 37 67.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 71806957 - NM_001030007 AP1G1 1 0.06 0.11 8 7.62 83.88 24 7.47 Yes 11 1.82 Yes 23 0.88 Yes -23 0.78 Yes 47 92.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 71823390 - NM_001030007 AP1G1 1 0.25 0.24 14 -0.12 0 15 4.71 No 2 0.77 Yes 23 0.32 Yes -15 0.42 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 71842581 - NM_001030007 AP1G1 1 4.1 3.83 69 1.5 0 20 4.47 No 51 0.86 Yes 19 0.76 Yes -19 0.55 No 51 66.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 24031263 - NM_001282474 AP1G2 1 1.5 1.49 50 2.37 76.63 16 4.69 No 20 -1.41 No 0 0 No -23 0.38 No 55 36.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24031317 - NM_001282474 AP1G2 1 0.41 0.38 20 6.15 76.09 59 7.74 Yes 61 0.01 No 19 0.74 Yes -40 0.61 No 39 61.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 24031395 - NM_001282474 AP1G2 1 0.28 0.28 17 5.89 73.21 20 5.1 No 52 0.5 No 0 0 No -25 0.73 Yes 45 82.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 24031788 - NM_001282474 AP1G2 1 0.97 0.71 33 2.87 73.22 14 3.91 No 56 -2.08 No 0 0 No -34 0.56 No 36 36.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24032492 - NM_001282474 AP1G2 1 9.47 6.51 72 8.91 87.8 15 4.98 No NA NA NA 25 0.72 Yes -25 0.43 No 48 59.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 24032512 - NM_001282474 AP1G2 1 0.72 0.56 29 5.44 76.29 42 6.39 Yes NA NA NA 25 0.72 Yes -26 0.7 Yes 44 61.57 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 24032819 - NM_001282474 AP1G2 1 0.78 1.35 51 -1.12 61.38 32 6.12 Yes 50 -4.42 No 20 0.58 Yes -49 0.64 No 21 62.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 24033030 - NM_001282474 AP1G2 1 0.19 0.22 13 1.21 63.17 21 5.2 No 8 -0.45 No 25 0.57 Yes -20 0.75 Yes 50 72.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24033369 - NM_001282474 AP1G2 1 687.05 103.07 72 8.16 80.37 26 5.48 No 69 0.44 No 25 0.72 Yes -25 0.88 Yes 45 76.06 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24033426 - NM_001282474 AP1G2 1 0.67 0.11 7 0.91 0 40 7.42 Yes 67 1.97 Yes 0 0 No -39 0.67 Yes 31 87.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16313799 + NM_001130524 AP1M1 1 0.27 0.21 13 7.79 82.9 9 6.4 Yes -4 1.4 Yes 23 0.37 Yes -23 0.68 Yes 47 81.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 16317147 + NM_001130524 AP1M1 1 0.37 0.5 27 -3.88 0 26 6.25 Yes 13 1.13 Yes 29 0.72 Yes -14 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 16339592 + NM_001130524 AP1M1 1 0.1 0.19 12 -10.49 0 9 4.56 No 44 1.48 Yes 0 0 No -56 0.6 No 14 45.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 16344922 + NM_001130524 AP1M1 1 0.24 0.39 23 6.05 80.05 29 6.65 Yes 16 1.26 Yes 0 0 No -28 0.96 Yes 42 96.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100799897 + NM_001283 AP1S1 1 0.32 0.42 21 2.6 77.35 15 5.64 Yes 42 1 Yes 0 0 No -23 0.5 No 43 56.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 15844108 - NM_003916 AP1S2 1 0.25 0.96 42 8.46 92.07 29 5.33 No 1 0.86 Yes 0 0 No -28 0.61 No 42 76.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 15846324 - NM_003916 AP1S2 1 0.04 0.13 8 5.85 68.91 44 6.47 Yes 31 0.41 No 0 0 No -43 0.58 No 27 79.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 15849692 - NM_003916 AP1S2 1 3.42 12.26 72 7.28 83.19 25 5.57 Yes 45 1.1 Yes 24 0.81 Yes -24 0.65 No 46 57.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 15851131 - NM_003916 AP1S2 1 1.02 3.79 67 11.73 91.9 33 5.58 Yes 11 0.45 No 24 0.9 Yes -24 0.66 No 46 82.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 15851648 - NM_003916 AP1S2 1 2.56 9.28 71 9.65 80.31 26 7.07 Yes 13 0.64 No 25 0.38 Yes -21 0.35 No 45 58.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 15861145 - NM_003916 AP1S2 1 0.15 0.51 28 4.74 84.41 39 4.81 No 44 0.49 No 0 0 No -31 0.66 No 39 69.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 15871194 - NM_003916 AP1S2 1 0.22 0.15 10 5.67 73.87 31 5.05 No 18 0.46 No 0 0 No -30 0.92 Yes 40 92.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 50274713 + NM_130787 AP2A1 1 0.1 0.17 10 8.52 91.87 28 7.25 Yes 53 1.19 Yes 0 0 No -27 0.47 No 49 48.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 50283052 + NM_130787 AP2A1 1 0.19 0.31 16 5.53 83.82 63 9.28 Yes 50 1.02 Yes 0 0 No -27 0.77 Yes 43 58.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 50285206 + NM_130787 AP2A1 1 0.08 0.11 7 -9.28 73 50 6.79 Yes 37 2.36 Yes 0 0 No -39 0.89 Yes 31 89.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50304647 + NM_130787 AP2A1 1 0.07 0.1 7 -16.88 0 22 6.93 Yes 9 2.26 Yes 20 0.95 Yes -21 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 50305790 + NM_130787 AP2A1 1 0.23 0.18 11 -0.55 67.05 144 12.24 Yes NA NA NA 30 0.43 Yes -44 0.67 Yes 28 82.23 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50306121 + NM_130787 AP2A1 1 0.27 0.26 17 10.84 80.54 39 6.71 Yes 26 -1.39 No 0 0 No -28 0.62 No 42 66.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50309666 + NM_130787 AP2A1 1 0.07 0.11 8 7.02 88.04 54 9.17 Yes 70 2.61 Yes 0 0 No -39 0.87 Yes 31 97.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 1004066 + NR_144509 AP2A2 1 0.6 0.51 29 -1.24 80.08 20 4.79 No 69 -1.22 No 0 0 No -19 0.84 Yes 51 40.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 1008013 + NR_144509 AP2A2 1 0.53 0.49 28 -5.04 0 27 5.74 Yes 0 0.59 No 24 0.94 Yes -12 0.86 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 1008830 + NR_144509 AP2A2 1 0.17 0.13 8 3.85 80.47 29 4.32 No 46 0.18 No 0 0 No -28 0.51 No 42 59.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 1009027 + NR_144509 AP2A2 1 0.4 0.33 19 6.04 92.27 14 5.57 Yes 50 0.78 Yes 0 0 No -24 0.47 No 48 55.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 1009163 + NR_144509 AP2A2 1 0.21 0.14 9 4.3 76.09 22 5.57 Yes 3 0.58 No 0 0 No -21 0.77 Yes 49 73.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 927091 + NR_144509 AP2A2 1 0.25 0.17 10 4.37 0 37 6.6 Yes 55 1.1 Yes 0 0 No -31 0.79 Yes 39 80.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 943604 + NR_144509 AP2A2 1 0.57 0.39 20 0.47 66.58 26 5.16 No 13 1.07 Yes 0 0 No -25 0.71 Yes 45 79.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 946224 + NR_144509 AP2A2 1 0.49 0.31 15 9.54 86.82 32 8.37 Yes 19 2.45 Yes 0 0 No -31 0.69 Yes 39 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 956785 + NR_144509 AP2A2 1 0.16 0.1 7 -2.49 70.7 32 7.64 Yes 19 1.38 Yes 0 0 No -31 0.9 Yes 39 91.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 984042 + NR_144509 AP2A2 1 0.15 0.14 10 1.46 0 18 4.12 No 34 0.74 No 0 0 No -17 0.54 No 53 45.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 984135 + NR_144509 AP2A2 1 0.26 0.25 14 6.04 87.52 17 5.48 No 4 0.69 No 0 0 No -16 0.45 No 54 47.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 984666 + NR_144509 AP2A2 1 0.5 0.47 27 8.14 80.72 17 5.06 No 4 1.35 Yes 0 0 No -26 0.73 Yes 44 87.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 985431 + NR_144509 AP2A2 1 33.02 20.9 72 7.57 86.41 23 5.39 No 10 0.54 No 22 0.87 Yes -19 0.71 Yes 48 66.16 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 33923226 + NM_001282 AP2B1 1 0.05 0.14 8 4.93 80.41 95 9.12 Yes 13 1.11 Yes 0 0 No -26 0.71 Yes 44 74.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33923556 + NM_001282 AP2B1 1 0.14 0.38 19 3.33 88.76 48 5.24 No 71 1.24 Yes 0 0 No -27 0.65 No 43 80.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33927955 + NM_001282 AP2B1 1 0.19 0.61 33 10.86 95.17 25 6.24 Yes 12 1.4 Yes 24 0.73 Yes -24 0.82 Yes 46 86.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 33928004 + NM_001282 AP2B1 1 0.13 0.4 23 5.75 82.28 31 5.43 No 61 1.39 Yes 35 0.58 Yes -35 0.61 No 35 66.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 33952245 + NM_001282 AP2B1 1 0.22 0.63 30 5.51 93.75 19 4.67 No 16 1.3 Yes 0 0 No -22 0.92 Yes 48 56.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33969480 + NM_001282 AP2B1 1 0.07 0.24 12 8.32 91.26 15 7.88 Yes 66 0.49 No 0 0 No -34 0.51 No 36 62.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33977621 + NM_001282 AP2B1 1 0.04 0.1 7 5.73 79.04 58 6.33 Yes 0 1.03 Yes 33 0.48 Yes -33 0.88 Yes 37 89.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 33986782 + NM_001282 AP2B1 1 3.14 5.22 71 7.06 82.72 60 6.97 Yes 34 0.91 Yes 23 0.79 Yes -23 0.8 Yes 47 65.66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 33997875 + NM_001282 AP2B1 1 48.03 79.29 72 13.24 91 46 6.77 Yes 33 1.4 Yes 35 0.27 Yes -45 0.36 No 35 54.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 34021283 + NM_001282 AP2B1 1 0.07 0.17 9 9.59 92.11 26 6.55 Yes 66 1.07 Yes 0 0 No -25 0.71 Yes 45 65.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 34034925 + NM_001282 AP2B1 1 0.2 0.5 25 -2.63 0 19 4.24 No 68 0.15 No 0 0 No -30 0.34 No 49 29.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 34034932 + NM_001282 AP2B1 1 3.35 7.93 72 -0.02 0 10 4 No 75 0.15 No 0 0 No -21 0.27 No 52 45.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 34046872 + NM_001282 AP2B1 1 0.17 0.29 19 4.4 84.42 20 6.76 Yes 7 0.36 No 23 0.64 Yes -23 0.88 Yes 47 88.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183897965 + NM_001311198 AP2M1 1 0.03 0.21 14 -8.81 0 13 4 No 18 1.52 Yes 25 0.6 Yes -30 0.92 Yes 40 95.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183898877 + NM_001311198 AP2M1 1 0.02 0.1 7 2.94 0 42 8.43 Yes 29 2.25 Yes 0 0 No -41 0.59 No 29 84.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 183901255 + NM_001311198 AP2M1 1 0.01 0.1 7 1.45 68.92 26 5.09 No 57 -4.27 No 19 0.97 Yes -26 0.57 No 44 40.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 77298902 - NM_001271769 AP3B1 1 0.8 1.11 49 3.51 74.78 54 7.63 Yes 41 0.69 No 24 0.75 Yes -33 0.31 No 17 62.99 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 77299319 - NM_001271769 AP3B1 1 0.46 0.63 30 7.54 80.29 24 7.64 Yes 11 0.77 No 0 0 No -23 0.73 Yes 47 58.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 77315328 - NM_001271769 AP3B1 1 0.13 0.21 14 1.88 73.35 70 7.89 Yes 6 1.21 Yes 0 0 No -33 0.65 No 37 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 77339841 - NM_001271769 AP3B1 1 0.15 0.24 11 1.92 0 21 4.58 No 39 1.12 Yes 0 0 No -20 0.86 Yes 50 93.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77383243 - NM_001271769 AP3B1 1 0.29 0.51 28 6.2 85.61 16 4.2 No 3 0.53 No 0 0 No -21 0.39 No 50 47.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 77383492 - NM_001271769 AP3B1 1 1.32 2.35 69 4.76 81.34 18 3.63 No 35 1.69 Yes 21 0.88 Yes -21 0.95 Yes 49 93.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 77383523 - NM_001271769 AP3B1 1 0.14 0.26 16 4.93 81.48 25 4.27 No 4 1.71 Yes 21 0.88 Yes -24 0.87 Yes 46 79.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 77385323 - NM_001271769 AP3B1 1 0.04 0.1 7 -12.93 0 22 8.69 Yes 9 0.81 Yes 0 0 No -21 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 77386485 - NM_001271769 AP3B1 1 0.08 0.17 10 5.94 82.61 23 6.77 Yes 49 1.03 Yes 0 0 No -22 0.7 Yes 48 75.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77398770 - NM_001271769 AP3B1 1 0.08 0.13 8 13.57 86.55 26 5.48 No 61 0.65 No 0 0 No -25 0.6 No 45 60.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 77399240 - NM_001271769 AP3B1 1 0.11 0.14 10 11.14 90.44 32 4.92 No 67 0.75 No 0 0 No -27 0.41 No 43 65.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 77417698 - NM_001271769 AP3B1 1 0.51 0.83 37 7.51 88.97 33 7.21 Yes 20 1.11 Yes 32 0.67 Yes -32 0.88 Yes 38 87.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 77423981 - NM_001271769 AP3B1 1 0.14 0.26 16 -0.83 0 42 7.22 Yes 29 0.94 Yes 0 0 No -41 0.66 No 29 76.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 77430928 - NM_001271769 AP3B1 1 0.65 1.15 43 8.29 79.5 31 5.59 Yes 45 1.72 Yes 0 0 No -30 0.8 Yes 40 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77439516 - NM_001271769 AP3B1 1 0.12 0.21 11 11.14 94.85 26 5.35 No 13 1.48 Yes 0 0 No -25 0.58 No 45 76.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 77452186 - NM_001271769 AP3B1 1 0.29 0.28 16 0.12 0 9 3.87 No 76 0.72 No 0 0 No -33 0.69 Yes 37 70.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 77459149 - NM_001271769 AP3B1 1 0.1 0.18 11 7.59 84.43 17 5.05 No 4 1.58 Yes 0 0 No -24 0.88 Yes 46 78.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77503244 - NM_001271769 AP3B1 1 0.23 0.38 21 4.8 0 33 7.27 Yes 20 1.32 Yes 0 0 No -33 0.78 Yes 37 70.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77510101 - NM_001271769 AP3B1 1 0.13 0.24 13 7.94 93.17 23 4.25 No 47 -3.55 No 0 0 No -30 0.43 No 40 51.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 77517551 - NM_001271769 AP3B1 1 0.1 0.18 12 13.46 99.45 27 7.28 Yes 14 1.2 Yes 0 0 No -26 0.87 Yes 44 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2108876 - NM_001261826 AP3D1 1 0.73 1.9 60 8.44 89.19 24 5.44 No 11 0.22 No 23 0.93 Yes -23 0.91 Yes 47 92.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2109125 - NM_001261826 AP3D1 1 0.09 0.18 10 7.56 81.21 31 5.81 Yes 68 1.66 Yes 23 0.6 Yes -34 0.6 No 36 71.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 2109231 - NM_001261826 AP3D1 1 0.14 0.24 13 1.18 71.32 22 5 No 9 -1.08 No 22 0.86 Yes -21 0.9 Yes 49 68.24 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 2109344 - NM_001261826 AP3D1 1 0.2 0.38 21 3.05 82.94 22 3.37 No 56 -5.53 No 0 0 No -37 0.38 No 33 25.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2112931 - NM_001261826 AP3D1 1 85.47 19.99 72 4.54 75.88 22 4.39 No 9 0.31 No 27 0.92 Yes -27 0.82 Yes 43 72.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2115544 - NM_001261826 AP3D1 1 0.06 0.11 7 10.76 78.89 21 5.74 Yes 8 1.77 Yes 0 0 No -20 0.7 Yes 50 68.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2116704 - NM_001261826 AP3D1 1 0.25 0.5 22 1.88 74.23 17 4.29 No 66 0.72 No 0 0 No -20 0.78 Yes 50 53.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 2116796 - NM_001261826 AP3D1 1 0.21 0.43 26 0.09 75.19 18 4.9 No 34 -3.32 No 26 0.6 Yes -17 0.65 No 53 74.96 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 2121996 - NM_001261826 AP3D1 1 0.42 1.15 47 10.95 87.45 37 6.08 Yes 24 0.1 No 0 0 No -30 0.87 Yes 40 72.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2129118 - NM_001261826 AP3D1 1 0.04 0.13 8 -17.94 0 9 3.87 No 57 1.31 Yes 0 0 No -33 0.14 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 2129499 - NM_001261826 AP3D1 1 0.32 0.72 37 4.31 74.61 23 3.11 No 54 -1.1 No 22 0.96 Yes -18 0.67 Yes 52 59.41 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 2130507 - NM_001261826 AP3D1 1 0.13 0.26 16 -10.6 0 18 4.88 No 36 0.86 Yes 0 0 No -25 0.57 No 58 23.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 2130511 - NM_001261826 AP3D1 1 0.82 1.65 58 -2.65 0 14 4.46 No 32 0.87 Yes 0 0 No -21 0.68 Yes 49 21.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2133484 - NM_001261826 AP3D1 1 0.08 0.19 13 6.51 86.37 16 5.92 Yes 76 -4.14 No 28 0.12 Yes -28 0.2 No 47 38.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 2137801 - NM_001261826 AP3D1 1 0.09 0.14 8 -0.89 0 11 3.86 No 51 0.38 No 0 0 No -30 0.55 No 60 75.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 2145213 - NM_001261826 AP3D1 1 0.22 0.26 15 8.21 89.3 25 5.57 Yes 42 2.04 Yes 0 0 No -24 0.77 Yes 46 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 75896971 - NM_001320265 AP3M1 1 0.71 1.08 50 7.2 81.62 15 5.06 No 2 1.57 Yes 0 0 No -26 0.62 No 44 47.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75898089 - NM_001320265 AP3M1 1 0.53 0.35 22 3.58 72.18 47 6.69 Yes 0 1.3 Yes 0 0 No -28 0.95 Yes 42 94.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 75898686 - NM_001320265 AP3M1 1 1.78 1.13 43 2.92 0 39 6.52 Yes 26 0.14 No 0 0 No -38 0.77 Yes 32 85.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 75898690 - NM_001320265 AP3M1 1 133.48 86.17 72 12.17 88.27 35 6.22 Yes 22 0.15 No 34 0.48 Yes -34 0.77 Yes 36 85.92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 75902036 - NM_001320265 AP3M1 1 0.31 0.18 9 7.2 84.73 27 4.29 No 4 0.27 No 0 0 No -26 0.95 Yes 44 95.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 75905910 - NM_001320265 AP3M1 1 0.46 0.32 16 6.51 72.2 47 8.68 Yes -3 0.98 Yes 0 0 No -30 0.52 No 40 69.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75910254 - NM_001320265 AP3M1 1 2.14 1.35 50 6.42 76.47 21 5.61 Yes 8 0.54 No 0 0 No -20 0.91 Yes 50 85.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 42013496 + NM_001134296 AP3M2 1 0.5 0.22 9 3.67 67.48 38 7.1 Yes 25 0.18 No 31 0.6 Yes -37 0.46 No 33 52.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 42014185 + NM_001134296 AP3M2 1 1.33 0.4 20 7.77 91.91 24 4.99 No 59 1.31 Yes 0 0 No -24 0.87 Yes 46 94.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42025714 + NM_001134296 AP3M2 1 1.07 0.42 23 10.2 92.53 35 4.53 No 15 1.01 Yes 27 0.87 Yes -27 0.82 Yes 43 79.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 115203501 + NM_001002924 AP3S1 1 0.4 1.4 48 8.76 87.41 31 5.24 No 18 1.45 Yes 0 0 No -30 0.91 Yes 40 88.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 115234345 + NM_001002924 AP3S1 1 0.12 0.5 29 3.5 66.88 14 5.08 No 1 1.22 Yes 23 0.91 Yes -23 0.95 Yes 47 93.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 115242517 + NM_001002924 AP3S1 1 0.04 0.18 12 12.07 90.84 18 5.79 Yes 23 1.89 Yes 27 0.66 Yes -27 0.77 Yes 43 83.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 115247785 + NM_001002924 AP3S1 1 0.15 0.71 36 6.3 79.16 83 6.48 Yes 70 1.36 Yes 24 0.88 Yes -25 0.49 No 45 79.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 114438533 - NM_001253853 AP4B1 1 0.25 0.15 9 0.47 78.28 24 6.07 Yes 11 2 Yes 0 0 No -23 0.81 Yes 47 81.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 114440669 - NM_001253853 AP4B1 1 0.4 0.14 9 4.26 79.67 28 6.74 Yes 15 0.7 No 0 0 No -27 0.84 Yes 43 77.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 51203700 + NM_007347 AP4E1 1 3.66 1.11 41 12.22 88.27 26 7.67 Yes 13 0.91 Yes 0 0 No -25 0.59 No 45 66.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 51204875 + NM_007347 AP4E1 1 1.54 0.57 32 3.97 84.41 35 4.01 No 16 0.92 Yes 0 0 No -28 0.84 Yes 42 85.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 51207621 + NM_007347 AP4E1 1 6.89 2.76 66 6.89 87.26 23 5.51 No 10 0.64 No 22 0.72 Yes -22 0.46 No 38 28.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 51208311 + NM_007347 AP4E1 1 2.4 0.83 40 8.79 87.44 24 7.42 Yes 11 1.29 Yes 0 0 No -23 0.94 Yes 47 93.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 51212648 + NM_007347 AP4E1 1 0.32 0.13 8 3.31 81.95 23 4.8 No 44 0.66 No 0 0 No -22 0.79 Yes 48 58.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 51218816 + NM_007347 AP4E1 1 0.18 0.1 7 3.59 84.41 29 5.74 Yes 58 0.08 No 0 0 No -26 0.63 No 44 83.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 51219426 + NM_007347 AP4E1 1 0.2 0.11 7 6 76.94 44 6.88 Yes 74 1.76 Yes 0 0 No -29 0.75 Yes 41 83.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 51226732 + NM_007347 AP4E1 1 0.71 0.26 14 10.61 83.1 42 6.06 Yes 3 0.73 No 36 0.33 Yes -36 0.57 No 34 42.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 51228642 + NM_007347 AP4E1 1 2.01 0.76 34 9.93 85.18 37 5.8 Yes 24 1.34 Yes 0 0 No -29 0.76 Yes 41 80.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 51242020 + NM_007347 AP4E1 1 1.93 0.69 35 -14.23 0 12 5.82 Yes -1 0.14 No 22 0.39 Yes -11 0.77 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 51251591 + NM_007347 AP4E1 1 0.78 0.24 16 3.44 86 22 5 No 57 -1.65 No 0 0 No -21 0.93 Yes 49 94.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 51260463 + NM_007347 AP4E1 1 0.64 0.19 8 -2.09 0 28 6.64 Yes 15 1.1 Yes 0 0 No -35 0.28 No 35 47.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 51272856 + NM_007347 AP4E1 1 2.04 0.88 41 10.77 92.61 24 5.29 No 11 0.3 No 0 0 No -23 0.96 Yes 47 94.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 51281730 + NM_007347 AP4E1 1 0.87 0.29 14 10.48 91.89 23 7.3 Yes 10 1.98 Yes 0 0 No -22 0.79 Yes 48 62.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 51292364 + NM_007347 AP4E1 1 0.65 0.26 18 11.05 98.16 31 10.9 Yes 18 1.09 Yes 0 0 No -30 0.95 Yes 40 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 51294100 + NM_007347 AP4E1 1 1.78 0.92 36 0.83 0 32 5.11 No 7 0.26 No 0 0 No -31 0.71 Yes 39 56.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 99699868 + NM_004722 AP4M1 1 0.88 0.15 10 -3.31 41.45 27 5.63 Yes 31 0.6 No 26 0.83 Yes -26 0.39 No 44 13.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 99700850 + NM_004722 AP4M1 1 0.51 0.13 9 5.56 86.87 19 5.48 No 6 1.25 Yes 18 0.8 Yes -18 0.61 No 52 77.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 99704035 + NM_004722 AP4M1 1 1.83 0.44 24 -0.51 0 19 4.34 No 64 -1.96 No 0 0 No -35 0.38 No 38 41.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99704403 + NM_004722 AP4M1 1 2.14 0.56 30 9.2 86.26 33 6.24 Yes NA NA NA 27 0.59 Yes -27 0.57 No 50 76.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 31544050 + NM_001254728 AP4S1 1 0.34 0.1 7 6.14 79.75 24 6.52 Yes 11 0.89 Yes 0 0 No -23 0.47 No 30 59.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 31545819 + NM_001254728 AP4S1 1 0.58 0.18 11 11.7 81.03 33 6.34 Yes 46 0.36 No 0 0 No -27 0.56 No 38 62.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31553974 + NM_001254728 AP4S1 1 0.36 0.11 8 7.04 85.35 16 4.01 No 30 -1.7 No 20 0.42 Yes -23 0.65 No 47 53.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 31558388 + NM_001254728 AP4S1 1 0.93 0.26 15 -7.79 33.6 36 6.48 Yes 23 0.28 No 0 0 No -22 0.66 No 48 42.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 57740426 + NM_018229 AP5M1 1 0.67 0.96 43 9.02 85.83 25 5.78 Yes 76 1.34 Yes 24 0.78 Yes -24 0.58 No 46 52.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 57749837 + NM_018229 AP5M1 1 0.14 0.17 11 -8.24 0 11 4.12 No 67 0.87 Yes 0 0 No -44 0.59 No 41 66.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 57750823 + NM_018229 AP5M1 1 0.15 0.19 11 1.22 77.87 20 4.9 No 7 0.38 No 0 0 No -19 0.86 Yes 51 91.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 3804521 + NM_001204446 AP5S1 1 3.24 1.22 48 6.26 0 24 6 Yes 11 2.22 Yes 19 0.85 Yes -23 0.85 Yes 47 85.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 4820809 + NM_014855 AP5Z1 1 0.27 0.18 10 -11.05 0 25 5.48 No 12 0.98 Yes 0 0 No -24 0.88 Yes 46 88.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 4821869 + NM_014855 AP5Z1 1 0.26 0.14 9 9.76 90.97 21 5.65 Yes 8 0.98 Yes 0 0 No -20 0.69 Yes 50 81.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 4822426 + NM_014855 AP5Z1 1 1.45 0.82 37 3.76 88.37 21 4.64 No 48 1.38 Yes 0 0 No -20 0.69 Yes 50 74.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 4825421 + NM_014855 AP5Z1 1 0.2 0.11 8 5.53 74.76 52 7.21 Yes 69 2.1 Yes 0 0 No -33 0.67 Yes 22 45.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 4825631 + NM_014855 AP5Z1 1 6.4 3.47 68 8.73 73.36 28 5.57 Yes 42 0.79 Yes 0 0 No -27 0.45 No 44 52.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 4827226 + NM_014855 AP5Z1 1 4.01 3.24 68 8.04 78.79 34 6.32 Yes NA NA NA 33 0.43 Yes -22 0.57 No 37 56.63 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 4827743 + NM_014855 AP5Z1 1 0.24 0.11 7 -0.38 0 54 7.28 Yes 10 0.47 No 29 0.65 Yes -22 0.8 Yes 48 68.2 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 4828872 + NM_014855 AP5Z1 1 0.59 0.25 13 10.75 88.97 31 7.12 Yes 41 0.1 No 0 0 No -30 0.33 No 40 58.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 4830440 + NM_014855 AP5Z1 1 0.52 0.29 18 9.78 82.06 33 5.92 Yes 20 0.47 No 32 0.91 Yes -32 0.67 Yes 42 73.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 4830440 + NM_014855 AP5Z1 1 1.15 0.78 41 9.78 82.06 33 5.92 Yes 20 0.47 No 32 0.91 Yes -32 0.67 Yes 42 73.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 99042977 + NM_181861 APAF1 1 0.12 0.11 7 8.13 83.54 32 5.58 Yes 19 0.86 Yes 0 0 No -34 0.76 Yes 36 76.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 99043990 + NM_181861 APAF1 1 1 0.67 31 4.09 84.69 17 4.22 No 1 0.67 No 0 0 No -24 0.57 No 46 52.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 99043993 + NM_181861 APAF1 1 0.46 0.31 18 4.86 91.35 20 4.45 No 4 0.67 No 0 0 No -27 0.4 No 51 52.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 99044515 + NM_181861 APAF1 1 0.34 0.19 13 9.67 88.38 31 6.72 Yes 18 2.43 Yes 0 0 No -30 0.79 Yes 40 91.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 99053224 + NM_181861 APAF1 1 0.79 0.4 23 9.53 83.87 26 5.28 No 29 1.33 Yes 0 0 No -28 0.54 No 42 68.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 99057842 + NM_181861 APAF1 1 0.18 0.14 9 2.86 84 15 4.61 No 2 1.5 Yes 0 0 No -54 0.5 No 20 54.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 99058828 + NM_181861 APAF1 1 1.37 0.97 35 7.5 84.33 25 6.8 Yes 18 0.67 No 0 0 No -25 0.5 No 45 80.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 99058832 + NM_181861 APAF1 1 0.95 0.67 25 2.25 0 29 7.02 Yes 22 0.65 No 0 0 No -29 0.51 No 41 81.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 99059345 + NM_181861 APAF1 1 0.63 0.42 22 5.76 77.78 19 4.86 No 23 1.36 Yes 0 0 No -35 0.6 No 35 48.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 99065378 + NM_181861 APAF1 1 0.23 0.19 11 2.24 78.11 42 4.56 No 76 0.11 No 0 0 No -31 0.52 No 39 50.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 99066577 + NM_181861 APAF1 1 0.19 0.18 11 5.15 90.14 28 5.45 No 52 0.82 Yes 0 0 No -27 0.48 No 12 50.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 99071237 + NM_181861 APAF1 1 0.3 0.28 16 4.3 78.06 20 6.63 Yes 61 1.23 Yes 0 0 No -22 0.78 Yes 48 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 99097126 + NM_181861 APAF1 1 0.15 0.11 7 7.34 87.43 20 4.8 No 71 0.66 No 26 0.86 Yes -20 0.79 Yes 43 75.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 99109237 + NM_181861 APAF1 1 0.56 0.39 21 -2.27 0 19 4.32 No 76 1.18 Yes 0 0 No -59 0.44 No 52 27.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 99117467 + NM_181861 APAF1 1 0.89 0.69 34 6.96 89.14 27 5.1 No 27 -2.29 No 0 0 No -26 0.52 No 44 42.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 99121002 + NM_181861 APAF1 1 6.14 3.51 65 9.4 86.63 31 6.04 Yes 18 1.22 Yes 0 0 No -21 0.66 No 49 75.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 3751050 - NM_004886 APBA3 1 0.48 0.28 15 9.33 90.56 32 5.47 No 60 1.54 Yes 0 0 No -26 0.66 No 45 57.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 3751084 - NM_004886 APBA3 1 0.23 0.13 8 -3.96 0 22 4.48 No 26 1.54 Yes 0 0 No -38 0.87 Yes 32 79.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3753944 - NM_004886 APBA3 1 0.32 0.18 12 3.91 77.36 34 6 Yes 21 0 No 25 0.84 Yes -33 0.6 No 49 59.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 26780711 + NM_019043 APBB1IP 1 0.14 0.14 10 2.11 84.41 27 5.74 Yes 30 1.11 Yes 0 0 No -27 0.62 No 43 81.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 26781239 + NM_019043 APBB1IP 1 0.16 0.14 8 2.28 75.49 22 3.57 No -3 0.64 No 25 0.8 Yes -21 0.83 Yes 49 80.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 26785836 + NM_019043 APBB1IP 1 0.74 1.31 47 2.24 67.55 58 7.91 Yes 25 1.37 Yes 0 0 No -29 0.5 No 33 63.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 26789795 + NM_019043 APBB1IP 1 0.08 0.13 9 6.44 82.32 18 4.35 No 55 0.96 Yes 0 0 No -24 0.27 No 53 47.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 26802469 + NM_019043 APBB1IP 1 0.06 0.14 7 -4.96 79.47 30 5.83 Yes 67 0.94 Yes 0 0 No -29 0.89 Yes 41 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 26814370 + NM_019043 APBB1IP 1 0.07 0.14 7 11.31 86.68 44 7.28 Yes 7 0.56 No 0 0 No -46 0.44 No 24 53.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 26824654 + NM_019043 APBB1IP 1 0.28 0.68 29 3.29 85.65 52 4.7 No 63 1.54 Yes 0 0 No -22 0.34 No 48 49.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 26833807 + NM_019043 APBB1IP 1 0.11 0.22 11 3.5 78.19 20 4.26 No 7 1.06 Yes 0 0 No -33 0.59 No 37 66.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 26841655 + NM_019043 APBB1IP 1 0.07 0.17 9 4.16 84.66 35 6.59 Yes 4 0.82 Yes 0 0 No -23 0.61 No 36 59.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 40925313 - NM_004307 APBB2 1 1.22 0.35 17 8.43 89.57 28 5.99 Yes 64 0.6 No 0 0 No -27 0.83 Yes 43 92.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 41067598 - NM_004307 APBB2 1 0.74 0.1 7 2.82 0 34 7.61 Yes 4 1.4 Yes 0 0 No -33 0.82 Yes 37 90.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 41095133 - NM_004307 APBB2 1 2.42 0.35 19 10.09 95.65 31 7.87 Yes 66 -1.97 No 0 0 No -30 0.38 No 40 32.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 41120223 - NM_004307 APBB2 1 5.62 1.33 40 8.62 90.44 41 6.86 Yes 46 0.35 No 40 0.49 Yes -40 0.93 Yes 30 97.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 139940086 - NM_133174 APBB3 1 1.5 0.28 15 -4.11 0 25 5.29 No 67 0.61 No 0 0 No -24 0.82 Yes 46 88.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 139940112 - NM_133174 APBB3 1 8.15 1.33 52 6.25 73.74 31 5.78 Yes 41 0.63 No 20 0.94 Yes -30 0.81 Yes 40 83.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 112145822 + NM_001127511 APC 1 0.25 0.11 8 7.64 83.01 16 4.3 No 63 -2.94 No 26 0.8 Yes -26 0.78 Yes 44 89.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 112154803 + NM_001127511 APC 1 0.56 0.1 7 8.53 84.52 32 5.72 Yes NA NA NA 0 0 No -29 0.54 No 39 55.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 112154965 + NM_001127511 APC 1 33.92 5.86 70 7.63 79.93 30 5.38 No 2 0.51 No 0 0 No -28 0.37 No 41 41.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 112159003 + NM_001127511 APC 1 32.72 9.08 72 13.05 95.22 27 5.74 Yes 14 0.88 Yes 26 0.92 Yes -26 0.93 Yes 44 94.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 112164880 + NM_001127511 APC 1 0.98 0.43 25 7.09 92.49 27 5.74 Yes 26 1.44 Yes 0 0 No -26 0.69 Yes 44 54.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 112166827 + NM_001127511 APC 1 0.27 0.13 7 2.17 84.41 32 6.57 Yes 54 1.48 Yes 0 0 No -31 0.55 No 39 59.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 112169671 + NM_001127511 APC 1 0.32 0.15 9 0.47 83.95 27 6.22 Yes 63 0.27 No 0 0 No -26 0.78 Yes 44 71.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 112169675 + NM_001127511 APC 1 1.93 0.92 39 3.74 0 31 6.51 Yes 67 0.26 No 0 0 No -30 0.8 Yes 40 71.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 112171294 + NM_001127511 APC 1 4.01 1.28 49 4.19 0 30 4.77 No 14 0.89 Yes 0 0 No -27 0.22 No 41 52.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49713545 + NM_001640 APEH 1 0.18 0.53 28 5.57 76.99 30 4.33 No 66 1.53 Yes 0 0 No -20 0.38 No 50 74.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 49713819 + NM_001640 APEH 1 0.13 0.24 14 -5.48 0 12 4.24 No 15 0.39 No 0 0 No -27 0.71 Yes 39 76.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49714337 + NM_001640 APEH 1 0.05 0.15 8 -6.51 66.11 28 6.07 Yes 64 1.78 Yes 0 0 No -27 0.75 Yes 49 70.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49715772 + NM_001640 APEH 1 0.1 0.21 9 3.04 0 19 4.58 No 6 0.75 No 0 0 No -18 0.78 Yes 52 61.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 49717508 + NM_001640 APEH 1 0.07 0.19 13 8.2 78.27 26 6.24 Yes 13 1.78 Yes 0 0 No -25 0.93 Yes 45 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49717982 + NM_001640 APEH 1 0.05 0.13 9 -9.54 0 12 3.87 No 25 0.55 No 28 0.9 Yes -30 0.74 Yes 33 69.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 49718400 + NM_001640 APEH 1 0.26 0.39 23 6.56 80.81 31 6.39 Yes 24 -1.57 No 0 0 No -29 0.43 No 41 62.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 49718537 + NM_001640 APEH 1 0.08 0.14 10 -3.12 0 27 6.71 Yes 14 1.06 Yes 0 0 No -26 0.79 Yes 44 71.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49718558 + NM_001640 APEH 1 0.26 0.38 19 10.1 89.91 15 4.61 No 35 1.05 Yes 0 0 No -27 0.59 No 43 38.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49718973 + NM_001640 APEH 1 0.09 0.21 15 5.12 89.51 33 6.53 Yes 20 1.34 Yes 0 0 No -22 0.61 No 38 68.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49720083 + NM_001640 APEH 1 0.07 0.13 8 2.46 71.61 49 8.16 Yes 12 0.1 No 0 0 No -24 0.67 Yes 46 91.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49720260 + NM_001640 APEH 1 0.08 0.13 8 0.66 65.55 23 5.39 No 36 -2.95 No 22 0.46 Yes -40 0.43 No 42 12.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 49720690 + NM_001640 APEH 1 0.05 0.11 8 5.25 72.75 26 5.48 No 23 0.95 Yes 0 0 No -23 0.68 Yes 47 37.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 20923880 + NM_001641 APEX1 1 0.03 0.13 7 -7.55 52.22 16 4.69 No 70 -4.07 No 20 0.54 Yes -16 0.27 No 17 76.63 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 20923893 + NM_001641 APEX1 1 0.23 0.96 40 3.17 77.06 21 4.64 No 8 0.27 No 20 0.54 Yes -20 0.54 No 24 76.51 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 20923896 + NM_001641 APEX1 1 0.07 0.29 18 1.35 76.35 24 4.95 No 11 0.27 No 20 0.54 Yes -23 0.46 No 37 88.6 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 20923960 + NM_001641 APEX1 1 0.11 0.46 28 5.6 92.53 26 5.32 No -2 0.66 No 25 0.77 Yes -22 0.6 No 48 73.5 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 20924074 + NM_001641 APEX1 1 0.05 0.19 13 -9.15 75.31 16 5.1 No -1 0.65 No 0 0 No -25 0.79 Yes 45 80.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 20925218 + NM_001641 APEX1 1 0.03 0.17 10 3.82 73.47 38 4.64 No 9 0.96 Yes 27 0.84 Yes -21 0.55 No 49 62.55 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 20925236 + NM_001641 APEX1 1 0.17 1 39 4.31 82.89 23 5.2 No 27 0.95 Yes 22 0.94 Yes -23 0.5 No 48 45.73 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 55029303 + NM_014481 APEX2 1 0.13 0.18 12 9.65 89.29 23 6.86 Yes 10 1.72 Yes 0 0 No -22 0.62 No 48 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 55033311 + NM_014481 APEX2 1 0.14 0.15 11 4.68 0 10 4 No 55 0.36 No 0 0 No -35 0.59 No 35 66.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 150239588 - NR_045034 APH1A 1 0.03 0.17 11 1.48 81.82 23 4.04 No 57 -1.17 No 0 0 No -42 0.69 Yes 28 64.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 150239655 - NR_045034 APH1A 1 0.04 0.21 11 3.8 78.37 28 5.66 Yes 38 1.37 Yes 27 0.86 Yes -27 0.84 Yes 43 80.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 63570489 + NM_031301 APH1B 1 0.55 0.19 12 4.44 81.46 30 5.02 No 17 0.17 No 29 0.76 Yes -30 0.59 No 40 54.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 63594922 + NM_031301 APH1B 1 0.7 0.19 12 11.13 81.2 22 5.61 Yes 9 0.83 Yes 0 0 No -31 0.54 No 45 70.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 43340282 + NR_024625 API5 1 1.78 0.26 13 4.23 65.95 24 5.36 No 11 0.36 No 0 0 No -23 0.55 No 42 75.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 43343514 + NR_024625 API5 1 0.04 0.19 12 1.59 88.74 26 4.28 No 64 1.24 Yes 24 0.82 Yes -23 0.75 Yes 47 70.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 43346734 + NR_024625 API5 1 0.1 0.32 18 7.55 76.71 52 9 Yes 16 0.39 No 0 0 No -28 0.48 No 33 61.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 43348101 + NR_024625 API5 1 0.11 0.42 22 5.85 85.32 19 5.83 Yes 6 0.93 Yes 0 0 No -28 0.58 No 40 52.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 43363982 + NR_024625 API5 1 0.05 0.11 7 -2.03 0 29 6.21 Yes 16 1.11 Yes 23 0.83 Yes -28 0.75 Yes 42 80.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 43348640 + NR_024625 API5 1 0.14 0.57 28 7.79 85.71 63 7.89 Yes 8 1.25 Yes 0 0 No -30 0.4 No 40 51.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 43356857 + NR_024625 API5 1 0.08 0.46 23 4.54 75.94 21 6.24 Yes 34 1.18 Yes 0 0 No -22 0.68 Yes 38 74.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 43360790 + NR_024625 API5 1 6.49 14.4 72 9.89 94.25 21 5.04 No 4 0.57 No 27 0.85 Yes -27 0.85 Yes 43 92.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 43363982 + NR_024625 API5 1 89.25 195.56 72 -2.03 0 29 6.21 Yes 16 1.11 Yes 23 0.83 Yes -28 0.75 Yes 42 80.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 34905050 - NM_015957 APIP 1 0.08 0.19 12 -13.77 0 34 10.01 Yes 31 0.35 No 0 0 No -33 0.89 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 34909913 - NM_015957 APIP 1 0.23 0.58 31 8.83 95.29 23 4.62 No 37 0.92 Yes 0 0 No -22 0.77 Yes 48 79.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 34912236 - NM_015957 APIP 1 0.06 0.13 8 8.67 91.06 28 5.48 No 15 1.09 Yes 0 0 No -27 0.84 Yes 43 79.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 34913531 - NM_015957 APIP 1 0.15 0.25 13 -0.31 72.03 31 5.57 Yes 18 0.64 No 0 0 No -30 0.91 Yes 40 94.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 68727862 + NM_173545 APLF 1 9.34 1.1 40 7.99 77.21 21 7 Yes 8 2.18 Yes 0 0 No -20 0.89 Yes 50 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 68742716 + NM_173545 APLF 1 36.13 5.17 72 9.9 80.83 31 5.66 Yes 43 -1.01 No 0 0 No -30 0.84 Yes 40 93.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 68753741 + NM_173545 APLF 1 4.02 0.46 26 5.02 82.56 24 5.19 No 55 0.48 No 0 0 No -21 0.73 Yes 49 69.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 68758479 + NM_173545 APLF 1 0.71 0.13 8 5.45 69.15 24 5.48 No 44 0.73 No 23 0.91 Yes -23 0.74 Yes 47 92.43 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 68794476 + NM_173545 APLF 1 1.36 0.17 10 -2.89 0 26 6.24 Yes 31 0.39 No 0 0 No -25 0.83 Yes 45 80.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 129993506 + NR_024516 APLP2 1 137.36 38.35 72 6.2 83.91 47 6.6 Yes 3 2.05 Yes 23 0.96 Yes -23 0.82 Yes 47 95.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 129997188 + NR_024516 APLP2 1 0.23 0.11 8 9.16 85.12 26 5.48 No 19 0.67 No 0 0 No -25 0.95 Yes 45 95.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 24944651 - NM_020531 APMAP 1 0.22 0.28 19 0.13 0 11 4.12 No 25 0.89 Yes 0 0 No -37 0.56 No 33 80.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 24945035 - NM_020531 APMAP 1 0.44 0.54 30 4.07 90.84 24 4.9 No 58 0.77 Yes 23 0.85 Yes -23 0.8 Yes 47 85.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 24945226 - NM_020531 APMAP 1 0.22 0.29 18 11.39 82.03 26 5.66 Yes 13 1.34 Yes 0 0 No -25 0.9 Yes 45 93.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 24952212 - NM_020531 APMAP 1 0.06 0.11 8 -10.31 0 26 6.26 Yes 64 -3.23 No 0 0 No -26 0.48 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 39381879 + NM_004900 APOBEC3B 1 0.06 0.1 7 3.1 72.16 42 6.63 Yes 42 -1.42 No 0 0 No -25 0.62 No 29 79.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 39381903 + NM_004900 APOBEC3B 1 0.1 0.14 8 1.2 0 15 4.24 No 66 -1.42 No 0 0 No -14 0.7 Yes 56 89.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39411625 + NM_014508 APOBEC3C 1 0.01 0.11 8 -1.72 73.42 17 4.65 No 73 -2.28 No 0 0 No -53 0.72 Yes 17 86.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39413977 + NM_014508 APOBEC3C 1 0.34 3.1 67 5.92 86.05 34 6.84 Yes 21 1.64 Yes 0 0 No -24 0.78 Yes 37 74.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39425221 + NM_152426 APOBEC3D 1 0.21 0.17 11 10.24 87.74 29 5.92 Yes 39 0.97 Yes 0 0 No -28 0.64 No 42 71.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 39421600 + NM_152426 APOBEC3D 1 0.26 0.14 9 3.33 70.6 47 5.97 Yes 52 1.23 Yes 0 0 No -32 0.42 No 24 74.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 39425221 + NM_152426 APOBEC3D 1 0.13 0.17 10 10.24 87.74 29 5.92 Yes 39 0.97 Yes 0 0 No -28 0.64 No 42 71.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 39425429 + NM_152426 APOBEC3D 1 0.21 0.24 14 -0.8 57.38 39 6.7 Yes 4 -2.74 No 0 0 No -38 0.72 Yes 32 89.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39425663 + NM_152426 APOBEC3D 1 0.31 0.17 10 7.92 85.05 29 9.59 Yes 16 1.26 Yes 0 0 No -28 0.95 Yes 42 97.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39440087 + NM_145298 APOBEC3F 1 17.22 21.19 72 10.68 87.41 29 4.93 No 57 -3.19 No 24 0.72 Yes -24 0.38 No 46 62.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 39441763 + NM_145298 APOBEC3F 1 1.69 2.1 56 7.57 88.35 22 4.75 No 76 2.66 Yes 0 0 No -21 0.72 Yes 49 56.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 39449756 + NM_145298 APOBEC3F 1 1.11 0.72 35 5.83 78.19 41 7.63 Yes 28 1.3 Yes 0 0 No -27 0.58 No 43 48.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39475367 + NM_021822 APOBEC3G 1 0.06 0.17 8 5.7 90.92 28 3.92 No 3 0.81 Yes 0 0 No -27 0.52 No 43 22.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39477154 + NM_021822 APOBEC3G 1 0.07 0.18 11 3.05 76.39 41 7.59 Yes 28 2.48 Yes 0 0 No -40 0.68 Yes 30 80.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39478347 + NM_021822 APOBEC3G 1 0.04 0.19 12 2.98 81.1 21 4.6 No 34 0.85 Yes 0 0 No -20 0.88 Yes 50 79.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39481455 + NM_021822 APOBEC3G 1 0.05 0.22 13 10.55 80.27 27 5.74 Yes 14 0.73 No 0 0 No -26 0.93 Yes 44 93.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39483344 + NM_021822 APOBEC3G 1 0.25 1.06 48 9.15 84.11 68 8.48 Yes 55 1.93 Yes 0 0 No -28 0.35 No 32 57.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 36655714 + NM_145343 APOL1 1 1.04 1.4 47 5.64 82.03 20 5.57 Yes 36 0.07 No 25 0.34 Yes -25 0.44 No 45 28.88 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 36660357 + NM_145343 APOL1 1 0.08 0.15 8 4.95 78.1 29 5.2 No 59 2.19 Yes 0 0 No -25 0.59 No 45 65.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 36627481 - NM_030882 APOL2 1 0.3 0.44 21 -3.06 0 15 4.18 No 42 0.29 No 0 0 No -18 0.84 Yes 11 44.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 36630382 - NM_030882 APOL2 1 1.24 1.65 54 6.73 82.7 30 6.53 Yes 17 1.36 Yes 29 0.53 Yes -29 0.74 Yes 41 77.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36633407 - NM_030882 APOL2 1 0.08 0.13 7 -8.73 69.42 31 6.58 Yes 36 0.3 No 27 0.57 Yes -30 0.8 Yes 40 76.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36633410 - NM_030882 APOL2 1 1.93 2.63 61 5.08 79.52 28 6.35 Yes 33 0.3 No 27 0.57 Yes -27 0.78 Yes 43 78.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36541651 - NM_145639 APOL3 1 4.17 4.46 72 4.53 80.72 19 6.67 Yes 65 1.2 Yes 21 0.71 Yes -26 0.65 No 34 53.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 36541651 - NM_145639 APOL3 1 0.46 0.39 19 4.53 80.72 19 6.67 Yes 65 1.2 Yes 21 0.71 Yes -26 0.65 No 34 53.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 36545234 - NM_145639 APOL3 1 0.86 0.57 26 13.32 87.81 19 5.91 Yes 41 0.9 Yes 28 0.65 Yes -28 0.67 Yes 42 73.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36545420 - NM_145639 APOL3 1 31.53 21.89 72 9.74 90.38 27 7.31 Yes 14 1.28 Yes 26 0.92 Yes -26 0.91 Yes 44 83.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36546013 - NM_145639 APOL3 1 0.46 0.35 20 6.33 70.77 28 7 Yes 15 0.41 No 27 0.73 Yes -27 0.85 Yes 43 79.66 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36549472 - NM_145639 APOL3 1 0.29 0.19 11 4.66 88.44 26 6.87 Yes 13 0.61 No 25 0.72 Yes -25 0.55 No 47 53.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 36549475 - NM_145639 APOL3 1 0.26 0.21 13 3.7 76.91 23 6.65 Yes 10 0.59 No 25 0.72 Yes -22 0.57 No 48 48.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 36550677 - NM_145639 APOL3 1 1.25 0.85 34 9.54 85.87 20 7.21 Yes 68 1.46 Yes 30 0.64 Yes -27 0.72 Yes 43 78.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36553055 - NM_145639 APOL3 1 0.23 0.15 10 3.91 74.29 29 5.54 No 16 0.38 No 28 0.86 Yes -28 0.78 Yes 42 91.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36555729 - NM_145639 APOL3 1 3.41 2.25 63 10.39 95.02 24 5.94 Yes 11 2.25 Yes 23 0.94 Yes -23 0.8 Yes 47 92.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36049650 + NM_030641 APOL6 1 0.92 0.75 32 4.76 82.36 32 6.16 Yes 37 -1.79 No 0 0 No -32 0.64 No 38 71.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 36052396 + NM_030641 APOL6 1 0.17 0.14 10 1.69 75.09 24 4.26 No 55 -2.07 No 27 0.81 Yes -23 0.93 Yes 47 90.75 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36063852 + NM_030641 APOL6 1 0.3 0.36 17 12.47 100 40 6.33 Yes 71 0.93 Yes 0 0 No -36 0.61 No 34 52.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 23851628 - NM_024122 APOO 1 89.51 46.53 72 8.95 95.6 20 5.04 No 7 0.43 No 0 0 No -28 0.76 Yes 42 61.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 23857078 - NM_024122 APOO 1 0.19 0.1 7 -1.42 0 44 5.73 Yes 60 0.24 No 0 0 No -43 0.66 No 27 70.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 23857082 - NM_024122 APOO 1 0.34 0.19 13 4.39 74.79 40 5.55 No 56 0.25 No 0 0 No -39 0.62 No 31 61.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 23858491 - NM_024122 APOO 1 0.14 0.13 8 0.87 0 29 5.83 Yes 16 0.52 No 0 0 No -32 0.71 Yes 38 81.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 23860339 - NM_024122 APOO 1 0.52 0.51 22 7.61 86.16 20 7.14 Yes 7 1.28 Yes 0 0 No -19 0.74 Yes 51 91.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 23869618 - NM_024122 APOO 1 0.19 0.17 11 7.37 69.41 41 7.7 Yes 28 0.17 No 0 0 No -25 0.49 No 45 63.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 23903349 - NM_024122 APOO 1 0.48 0.17 11 8.08 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.83 Yes 51 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 84264666 + NM_198450 APOOL 1 7.69 2.97 64 11.82 81.19 27 5.48 No 40 1.34 Yes 0 0 No -34 0.65 No 44 76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 84273227 + NM_198450 APOOL 1 2.88 1.14 50 7.04 91.9 28 5.39 No 22 0.12 No 0 0 No -27 0.71 Yes 43 69.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 84303321 + NM_198450 APOOL 1 2.86 1.68 51 6.84 83.4 42 6.45 Yes 33 1.95 Yes 0 0 No -35 0.67 Yes 35 82.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104029551 + NM_032374 APOPT1 1 1.41 0.89 39 6.84 83.35 19 5.96 Yes 75 -3.6 No 18 0.23 Yes -37 0.35 No 34 27.21 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 104040726 + NM_032374 APOPT1 1 0.62 0.74 32 10.24 78.66 29 5.24 No 16 1.03 Yes 28 0.89 Yes -28 0.91 Yes 42 92.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 104045707 + NM_032374 APOPT1 1 1.14 1.31 54 9.17 88.27 25 7.03 Yes 76 -4.23 No 30 0.29 Yes -30 0.6 No 45 34.96 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 104047905 + NM_032374 APOPT1 1 0.48 0.58 31 8.11 88.27 40 6.9 Yes 27 0.92 Yes 31 0.71 Yes -31 0.79 Yes 39 89.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 104051200 + NM_032374 APOPT1 1 0.73 0.9 35 0.12 74.55 21 4.95 No 26 0.35 No 0 0 No -20 0.62 No 50 52.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104053615 + NM_032374 APOPT1 1 0.14 0.15 11 -1.67 0 20 4.12 No 54 1.51 Yes 0 0 No -24 0.41 No 45 55.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104056519 + NM_032374 APOPT1 1 0.18 0.24 14 -2.66 77.17 30 7.35 Yes 35 0.89 Yes 0 0 No -29 0.84 Yes 41 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58531752 - NM_006380 APPBP2 1 0.1 0.13 7 6.07 70.4 31 5.28 No 18 0.79 Yes 0 0 No -30 0.95 Yes 40 96.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58532766 - NM_006380 APPBP2 1 0.14 0.15 10 11.87 89.87 19 5 No 74 1.29 Yes 0 0 No -23 0.56 No 52 53.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 58545872 - NM_006380 APPBP2 1 0.19 0.17 11 7.56 78.09 15 7.17 Yes 20 -2.34 No 32 0.72 Yes -22 0.51 No 38 55.97 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 58573803 - NM_006380 APPBP2 1 0.89 0.35 21 11.49 87.71 36 5.63 Yes 16 0.31 No 28 0.81 Yes -28 0.87 Yes 42 83.78 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 58597927 - NM_006380 APPBP2 1 0.31 0.21 12 10.6 94.37 28 7.69 Yes 15 0.82 Yes 0 0 No -28 0.49 No 42 76.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 57264722 + NM_012096 APPL1 1 0.33 0.21 10 5.37 88.33 15 5.2 No 17 0.36 No 21 0.79 Yes -29 0.82 Yes 41 78.07 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 57264741 + NM_012096 APPL1 1 7.56 4.56 70 3.93 78.2 16 4.93 No 3 0.45 No 21 0.79 Yes -21 0.85 Yes 49 85.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 57264746 + NM_012096 APPL1 1 0.19 0.11 8 0.09 0 21 5.35 No 8 0.42 No 0 0 No -26 0.86 Yes 44 87.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 57269609 + NM_012096 APPL1 1 0.14 0.1 7 -0.56 0 14 4.47 No 34 0.84 Yes 0 0 No -46 0.7 Yes 24 86.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 57272518 + NM_012096 APPL1 1 0.22 0.33 22 5.91 74.32 38 5.91 Yes 7 0.97 Yes 0 0 No -19 0.58 No 47 49.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 57274497 + NM_012096 APPL1 1 0.06 0.13 7 4.2 0 36 6.78 Yes 40 0.39 No 0 0 No -35 0.62 No 35 87.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 57276129 + NM_012096 APPL1 1 0.12 0.15 7 -13.57 0 77 5.7 Yes 0 0.47 No 0 0 No -24 0.75 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 57282229 + NM_012096 APPL1 1 0.14 0.24 13 2.66 0 12 4.24 No 13 0.69 No 0 0 No -30 0.57 No 37 63.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105583930 - NM_001251905 APPL2 1 0.64 0.1 7 3.51 0 22 5.64 Yes 66 0.66 No 0 0 No -30 0.8 Yes 40 88.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105589305 - NM_001251905 APPL2 1 1.99 0.28 15 3.05 74.39 56 7.48 Yes 28 0.13 No 27 0.89 Yes -26 0.7 Yes 44 72.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 105593303 - NM_001251905 APPL2 1 0.92 0.13 7 2.22 0 10 2.97 No 17 1.75 Yes 22 0.92 Yes -29 0.57 No 41 65.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 105601826 - NM_001251905 APPL2 1 2.4 0.51 31 6.42 78.54 42 7.69 Yes 6 0.99 Yes 18 0.75 Yes -41 0.6 No 52 53.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 105601975 - NM_001251905 APPL2 1 0.7 0.15 9 1.36 73.44 29 5.92 Yes 16 0.97 Yes 0 0 No -28 0.82 Yes 42 84.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 105610507 - NM_001251905 APPL2 1 0.96 0.15 9 5.29 86.96 28 3.72 No 74 0.18 No 0 0 No -27 0.65 No 47 52.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105611714 - NM_001251905 APPL2 1 2.53 0.31 17 8.77 95.1 25 6.45 Yes 61 -1.9 No 0 0 No -20 0.32 No 46 50.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 88876249 - NM_001030018 APRT 1 216.83 368.01 72 10.32 85.45 17 6.25 Yes 4 1.5 Yes 29 0.78 Yes -28 0.69 Yes 42 81.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88877058 - NM_001030018 APRT 1 0.21 1.03 40 6.04 79.72 37 5.66 Yes 1 0.49 No 0 0 No -27 0.61 No 43 67.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 88877770 - NM_001030018 APRT 1 0.03 0.11 8 2.8 78.37 20 5.1 No 71 -5.71 No 0 0 No -27 0.48 No 51 28.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 77313651 - NR_038361 APTR 1 3 0.81 38 3.18 85.84 24 7.68 Yes 70 -6.14 No 23 0.95 Yes -23 0.92 Yes 47 92.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 32973682 - NM_001195250 APTX 1 0.29 0.51 30 -0.8 0 66 6.19 Yes 44 1.22 Yes 21 0.73 Yes -47 0.68 Yes 23 79.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 32973687 - NM_001195250 APTX 1 4.16 7.53 72 6.94 88.68 61 5.95 Yes 39 1.23 Yes 42 0.51 Yes -42 0.85 Yes 28 81.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 32980436 - NM_001195250 APTX 1 0.42 0.86 40 8.43 86.14 20 4.69 No 43 1.33 Yes 25 0.82 Yes -25 0.43 No 45 57.21 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 32980459 - NM_001195250 APTX 1 0.47 1.03 42 7.55 83.3 33 6.24 Yes 20 1.26 Yes 25 0.82 Yes -32 0.9 Yes 38 89.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 32982713 - NM_001195250 APTX 1 0.06 0.14 8 8.42 90.14 30 5.63 Yes 35 1.36 Yes 0 0 No -29 0.75 Yes 41 77.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 32985680 - NM_001195250 APTX 1 0.26 0.5 20 6.51 90.14 23 4.9 No 10 1.06 Yes 0 0 No -22 0.9 Yes 48 90.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 32987845 - NM_001195250 APTX 1 36.32 5.9 71 9.71 87.55 28 5.49 No 4 1.34 Yes 27 0.49 Yes -28 0.65 No 42 54.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 32988123 - NM_001195250 APTX 1 213.91 34.35 72 2.42 0 27 7.99 Yes 14 1.12 Yes 27 0.73 Yes -26 0.59 No 43 70.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 32988128 - NM_001195250 APTX 1 426.23 70.4 72 9.84 82.99 22 7.67 Yes 9 1.14 Yes 27 0.73 Yes -21 0.52 No 48 69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 32988128 - NM_001195250 APTX 1 1.22 0.21 15 9.84 82.99 22 7.67 Yes 9 1.14 Yes 27 0.73 Yes -21 0.52 No 48 69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 32989479 - NM_001195250 APTX 1 0.91 0.15 10 11.69 89.32 23 5.39 No 10 0.6 No 0 0 No -22 0.88 Yes 48 85.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 32989918 - NM_001195250 APTX 1 0.43 0.19 11 3.59 81.46 20 5.1 No 71 -3.92 No 22 0.66 Yes -19 0.76 Yes 51 80.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 32997347 - NM_001195250 APTX 1 33.85 17.01 72 4.85 76.07 33 8.18 Yes 20 1.07 Yes 22 0.55 Yes -32 0.68 Yes 38 69.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 58471379 + NM_001320636 AQP9 1 2.93 0.57 27 7.13 86.19 27 5.31 No 58 1 Yes 0 0 No -26 0.56 No 44 65.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 35163019 - NM_014691 AQR 1 0.23 0.35 19 -3.35 56.24 22 6.04 Yes 18 -2.64 No 0 0 No -21 0.72 Yes 49 48.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 35175484 - NM_014691 AQR 1 0.06 0.11 7 9.01 94.28 97 7.63 Yes 10 0.53 No 0 0 No -22 0.72 Yes 48 73.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 35180891 - NM_014691 AQR 1 0.26 0.24 15 2.49 0 36 8.33 Yes 38 1.25 Yes 0 0 No -36 0.52 No 34 50.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 35181381 - NM_014691 AQR 1 0.14 0.15 10 9.65 78.68 24 5.82 Yes 11 1.12 Yes 0 0 No -24 0.47 No 47 62.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 35182811 - NM_014691 AQR 1 0.15 0.19 12 7.58 85.98 27 4.76 No 8 0.4 No 0 0 No -20 0.87 Yes 50 94.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 35219824 - NM_014691 AQR 1 0.07 0.14 10 11.13 91.37 37 6.85 Yes 70 0.76 No 0 0 No -21 0.55 No 49 54.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 35224638 - NM_014691 AQR 1 0.05 0.1 7 -6.63 0 25 6.08 Yes 3 0.85 Yes 26 0.94 Yes -24 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 35236245 - NM_014691 AQR 1 0.18 0.21 12 7.44 87.79 23 6.35 Yes 10 0.94 Yes 0 0 No -22 0.83 Yes 48 80.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 35244107 - NM_014691 AQR 1 0.6 0.74 34 8.23 88.36 21 5.2 No 39 0.6 No 0 0 No -24 0.52 No 49 68.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 35244566 - NM_014691 AQR 1 0.15 0.15 10 7.9 82.86 32 4.09 No 19 0.44 No 0 0 No -22 0.49 No 48 66.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 35256184 - NM_014691 AQR 1 0.76 0.5 26 6.69 80.77 26 5.29 No 22 1.29 Yes 0 0 No -25 0.9 Yes 45 71.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 35256488 - NM_014691 AQR 1 0.7 0.6 30 -1.38 0 30 7.03 Yes 61 1.11 Yes 0 0 No -29 0.92 Yes 41 96.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 35256544 - NM_014691 AQR 1 0.25 0.21 10 7.52 83.02 18 5.87 Yes 5 1.11 Yes 0 0 No -24 0.83 Yes 46 87.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47422080 + NM_001256196 ARAF 1 0.99 0.83 39 4.91 71.45 54 7.32 Yes NA NA NA 0 0 No -41 0.48 No 24 58.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 47423500 + NM_001256196 ARAF 1 0.13 0.15 9 6.53 79.11 70 7.1 Yes 14 0.53 No 0 0 No -32 0.4 No 38 44.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 47425839 + NM_001256196 ARAF 1 0.23 0.17 11 9.71 92.15 15 5.45 No 31 -1.01 No 0 0 No -21 0.28 No 49 38.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 47426022 + NM_001256196 ARAF 1 1.15 0.9 41 1 0 10 4.47 No 49 -1.38 No 19 0.91 Yes -22 0.67 Yes 48 80.43 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 47426087 + NM_001256196 ARAF 1 0.2 0.15 10 7.71 81.68 31 5.57 Yes 18 1.42 Yes 0 0 No -30 0.77 Yes 40 89.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47426631 + NM_001256196 ARAF 1 0.17 0.15 10 -2.6 62.15 28 5.81 Yes 36 -1.92 No 0 0 No -27 0.94 Yes 43 85.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 47428355 + NM_001256196 ARAF 1 0.17 0.29 18 -5.29 0 14 4.47 No -4 0.85 Yes 28 0.47 Yes -8 0.23 No 62 31.54 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 47429315 + NM_001256196 ARAF 1 0.28 0.46 24 4.5 83.59 18 4.81 No 50 1.72 Yes 0 0 No -22 0.55 No 48 41.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 47430320 + NM_001256196 ARAF 1 0.18 0.21 14 3.47 73 36 7.28 Yes 71 2.22 Yes 0 0 No -35 0.69 Yes 35 83.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47430856 + NM_001256196 ARAF 1 0.16 0.19 14 6.51 77.48 25 5.1 No 12 0.82 Yes 0 0 No -24 0.96 Yes 46 92.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72398648 - NM_001040118 ARAP1 1 0.08 0.17 10 6.95 79.34 52 5.64 Yes 0 1.05 Yes 0 0 No -24 0.95 Yes 46 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72403979 - NM_001040118 ARAP1 1 1.15 0.74 34 9.91 85.76 47 9.26 Yes 5 1.11 Yes 0 0 No -29 0.35 No 24 41.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 72404269 - NM_001040118 ARAP1 1 0.19 0.17 11 5.93 93.65 23 5.39 No 31 0.54 No 23 0.78 Yes -23 0.87 Yes 47 88.13 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 72404512 - NM_001040118 ARAP1 1 1.41 1.15 50 -2.17 0 25 5.1 No 57 -1.49 No 0 0 No -24 0.79 Yes 46 73.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 72404958 - NM_001040118 ARAP1 1 0.45 0.56 28 -0.12 0 32 6.43 Yes 19 0.31 No 0 0 No -34 0.76 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 72407698 - NM_001040118 ARAP1 1 1.77 2.78 65 -0.59 73.83 27 6.56 Yes 14 1.55 Yes 0 0 No -26 0.86 Yes 44 77.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72408516 - NM_001040118 ARAP1 1 0.15 0.22 14 1.55 81.9 19 5 No 20 1.91 Yes 0 0 No -36 0.88 Yes 34 76.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72412230 - NM_001040118 ARAP1 1 0.65 0.72 35 7.06 85.12 33 7.68 Yes 20 1.77 Yes 0 0 No -32 0.89 Yes 38 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72412827 - NM_001040118 ARAP1 1 0.26 0.36 21 -8.14 64.08 31 6.56 Yes 18 1.47 Yes 0 0 No -30 0.71 Yes 40 62.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 72415939 - NM_001040118 ARAP1 1 0.15 0.18 12 3.67 78.58 37 6.56 Yes 60 -1.35 No 0 0 No -37 0.86 Yes 33 87.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 72422205 - NM_001040118 ARAP1 1 0.08 0.14 10 1.73 60.23 28 5.46 No 70 0.37 No 27 0.45 Yes -27 0.86 Yes 43 45.15 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 72423343 - NM_001040118 ARAP1 1 0.06 0.14 9 4.12 84.88 18 4.9 No 42 1.22 Yes 0 0 No -23 0.51 No 47 57.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 72423364 - NM_001040118 ARAP1 1 0.06 0.15 8 -2.48 69.49 24 5.48 No 66 1.32 Yes 0 0 No -54 0.65 No 16 70.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 72423367 - NM_001040118 ARAP1 1 0.3 0.67 31 -1.73 63.35 21 5.2 No 63 1.32 Yes 0 0 No -51 0.67 Yes 19 68.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 72423611 - NM_001040118 ARAP1 1 0.15 0.22 13 -16.37 58.68 28 5.15 No 39 -2.74 No 0 0 No -21 0.62 No 37 46.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 72449236 - NM_001040118 ARAP1 1 1.01 0.29 16 6.02 72.79 27 6.04 Yes 14 1.86 Yes 0 0 No -26 0.87 Yes 44 87.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 36095469 - NM_015230 ARAP2 1 1.04 0.54 30 11.24 89.91 29 6.76 Yes -4 0.95 Yes 0 0 No -28 0.75 Yes 42 91.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 36126530 - NM_015230 ARAP2 1 0.44 0.25 15 9.36 92.97 17 5.48 No 73 0.28 No 0 0 No -23 0.48 No 43 66.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 36149335 - NM_015230 ARAP2 1 4.01 2.25 62 3.04 67.75 39 6.56 Yes 58 1.11 Yes 0 0 No -38 0.81 Yes 32 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 36161913 - NM_015230 ARAP2 1 1 0.43 24 9.89 87.13 33 5.56 Yes 25 0.95 Yes 0 0 No -27 0.87 Yes 43 84.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 36168695 - NM_015230 ARAP2 1 0.7 0.42 24 10.6 84.73 39 7.1 Yes 73 1.07 Yes 29 0.69 Yes -27 0.35 No 43 44.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 36179273 - NM_015230 ARAP2 1 0.35 0.19 12 6.8 76.49 33 6.48 Yes 20 0.49 No 0 0 No -32 0.78 Yes 38 85.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 36187594 - NM_015230 ARAP2 1 1.67 0.86 40 2.9 0 32 6.37 Yes 61 1.27 Yes 0 0 No -31 0.64 No 35 53.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 36214077 - NM_015230 ARAP2 1 8.23 5.38 72 2.94 85.34 22 4 No 2 0.2 No 0 0 No -22 0.81 Yes 48 80.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 36214107 - NM_015230 ARAP2 1 0.43 0.29 15 0.82 76.79 43 6.71 Yes -4 -2.01 No 0 0 No -35 0.62 No 35 72.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 118444334 + NM_001655 ARCN1 1 0.15 0.31 20 8.4 83.35 43 6.92 Yes 69 0.72 No 42 0.38 Yes -42 0.44 No 28 52.34 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 118462655 + NM_001655 ARCN1 1 0.04 0.15 8 1.81 83.57 30 3.49 No -2 -1 No 0 0 No -33 0.58 No 37 50.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118462680 + NM_001655 ARCN1 1 0.03 0.15 10 8.4 90.23 16 4.19 No 3 0.85 Yes 0 0 No -54 0.42 No 12 48.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 118463460 + NM_001655 ARCN1 1 0.09 0.42 25 6.9 90.4 19 6.74 Yes 59 0.8 Yes 0 0 No -28 0.41 No 49 40.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 118464718 + NM_001655 ARCN1 1 0.34 1.28 53 6.87 84.38 24 5.48 No 53 -3.21 No 0 0 No -23 0.68 Yes 49 56.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75130798 - NM_001039479 AREL1 1 0.5 0.38 21 3.76 74.26 32 5.74 Yes 70 1.16 Yes 27 0.89 Yes -31 0.74 Yes 39 86.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75136733 - NM_001039479 AREL1 1 0.16 0.14 8 4.03 0 13 4.36 No 69 1.82 Yes 0 0 No -15 0.52 No 55 41.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75136846 - NM_001039479 AREL1 1 0.72 0.67 32 -0.52 0 13 4.36 No 73 1.29 Yes 26 0.59 Yes -26 0.42 No 44 39.62 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 75139653 - NM_001039479 AREL1 1 0.31 0.33 20 -7.47 78.95 25 5.43 No 12 0.76 No 0 0 No -28 0.52 No 42 74.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75142513 - NM_001039479 AREL1 1 0.18 0.17 9 4.87 82.16 13 7.21 Yes 0 1.09 Yes 0 0 No -24 0.43 No 49 66.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75142657 - NM_001039479 AREL1 1 0.1 0.1 7 -3.61 0 47 6.47 Yes 18 1.87 Yes 25 0.71 Yes -30 0.41 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 75145033 - NM_001039479 AREL1 1 0.3 0.26 16 10.09 90.51 21 5.66 Yes 8 1.16 Yes 25 0.83 Yes -25 0.78 Yes 45 87.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75150261 - NM_001039479 AREL1 1 0.65 0.42 24 10.81 86.14 37 6.24 Yes 29 1 Yes 28 0.98 Yes -34 0.85 Yes 36 90.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75150261 - NM_001039479 AREL1 1 0.17 0.13 8 10.81 86.14 37 6.24 Yes 29 1 Yes 28 0.98 Yes -34 0.85 Yes 36 90.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75150981 - NM_001039479 AREL1 1 0.17 0.13 9 9.01 84.95 31 5.27 No 40 0.27 No 0 0 No -30 0.88 Yes 40 93.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75157854 - NM_001039479 AREL1 1 3.33 2.4 63 8.14 86.16 25 6.47 Yes 12 1.39 Yes 24 0.9 Yes -24 0.82 Yes 46 81.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75165560 - NM_001039479 AREL1 1 4.22 2.36 58 11.15 88.27 31 4.81 No 69 0.81 Yes 24 0.55 Yes -24 0.49 No 46 81.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 75168478 - NM_001039479 AREL1 1 2.9 1.74 61 8.68 98.54 21 5.52 No 8 1.25 Yes 20 0.79 Yes -24 0.49 No 46 59.6 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 49333541 - NM_001659 ARF3 1 0.03 0.15 10 4.38 79.74 18 5.57 Yes 49 0.53 No 0 0 No -24 0.53 No 46 57.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 49337090 - NM_001659 ARF3 1 0.09 0.29 19 6.59 80.62 34 6.39 Yes 64 1.95 Yes 0 0 No -27 0.6 No 43 54.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49349981 - NM_001659 ARF3 1 0.6 2.17 53 1.35 60.47 60 7.08 Yes 47 1.12 Yes 23 0.9 Yes -54 0.55 No 11 73.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 49350134 - NM_001659 ARF3 1 0.16 0.57 29 7.76 91.33 23 5.35 No 10 0.2 No 22 0.88 Yes -26 0.56 No 44 61.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 49350319 - NM_001659 ARF3 1 0.31 1.15 43 11.18 90.11 35 5.19 No 22 1.24 Yes 34 0.43 Yes -34 0.83 Yes 36 84.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 57558050 - NM_001660 ARF4 1 0.04 0.22 10 -0.46 74.04 16 4.95 No 3 1.14 Yes 30 0.86 Yes -21 0.5 No 49 48.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 57563096 - NM_001660 ARF4 1 0.05 0.31 16 5.64 81.1 22 4.05 No 24 0.88 Yes 0 0 No -21 0.35 No 30 73.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 57569690 - NM_001660 ARF4 1 0.04 0.19 13 3.58 87.04 19 5 No 69 0.91 Yes 0 0 No -19 0.63 No 51 66.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 57569760 - NM_001660 ARF4 1 0.41 2.03 57 2.61 68.45 33 6.08 Yes -1 0.55 No 23 0.72 Yes -33 0.49 No 37 45.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 57581676 - NM_001660 ARF4 1 0.03 0.14 8 11.38 95.65 30 6.56 Yes 68 -0.8 No 0 0 No -29 0.82 Yes 41 89.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 57582360 - NM_001660 ARF4 1 0.02 0.13 8 9.03 83.01 41 6.48 Yes 45 -0.78 No 0 0 No -35 0.85 Yes 35 84.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 127231022 + NM_001662 ARF5 1 0.06 0.24 13 4.47 0 9 3.87 No -4 0.25 No 22 0.76 Yes -28 0.82 Yes 42 89.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 61905312 + NM_001281483 ARFGAP1 1 0.65 0.15 10 9.85 84.94 24 4.26 No 11 0.83 Yes 26 0.75 Yes -23 0.88 Yes 47 80.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 61909229 + NM_001281483 ARFGAP1 1 0.34 0.4 21 9.63 85.96 29 7.33 Yes 16 1.87 Yes 0 0 No -28 0.93 Yes 42 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61910571 + NM_001281483 ARFGAP1 1 0.46 0.51 27 7.93 85.05 27 7.19 Yes 14 1.02 Yes 30 0.74 Yes -30 0.65 No 40 76.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr20 61913456 + NM_001281483 ARFGAP1 1 1.68 1.54 59 8.47 80.99 31 7.87 Yes 41 1.44 Yes 0 0 No -30 0.87 Yes 40 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47189569 - NM_001242832 ARFGAP2 1 0.16 0.29 15 5.45 83.69 16 5.26 No 36 1.36 Yes 0 0 No -22 0.79 Yes 48 78.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47193340 - NM_001242832 ARFGAP2 1 0.13 0.14 9 -4.43 0 15 4.58 No 18 0.57 No 0 0 No -30 0.86 Yes 40 86.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 47194303 - NM_001242832 ARFGAP2 1 4.56 5.93 70 8.81 92.46 22 3.52 No 68 -2.66 No 25 0.76 Yes -25 0.76 Yes 46 71.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 43194051 - NM_014570 ARFGAP3 1 0.14 0.11 8 10.29 89.94 18 4.62 No 56 1.12 Yes 0 0 No -23 0.48 No 36 48.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 43221688 - NM_014570 ARFGAP3 1 0.06 0.1 7 0.3 84.41 40 4.48 No 69 0.81 Yes 0 0 No -27 0.87 Yes 43 93.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43225538 - NM_014570 ARFGAP3 1 3.39 4.94 71 11.15 88.97 43 7.7 Yes 50 1.38 Yes 0 0 No -28 0.86 Yes 42 90.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43225538 - NM_014570 ARFGAP3 1 0.36 0.53 30 11.15 88.97 43 7.7 Yes 50 1.38 Yes 0 0 No -28 0.86 Yes 42 90.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43228964 - NM_014570 ARFGAP3 1 0.08 0.14 9 10.5 93.31 30 5.39 No 66 0.86 Yes 0 0 No -29 0.55 No 41 34.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 68115403 - NM_006421 ARFGEF1 1 0.28 0.29 20 1.95 64.35 22 6.36 Yes 9 0.15 No 0 0 No -21 0.88 Yes 49 82.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 68116959 - NM_006421 ARFGEF1 1 2.79 2.44 64 5.05 87.96 35 6 Yes 46 -3.03 No 0 0 No -34 0.68 Yes 36 68.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 68117002 - NM_006421 ARFGEF1 1 1.28 1.14 43 5.86 75.24 19 6.64 Yes 45 0.01 No 26 0.31 Yes -18 0.55 No 52 59.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 68129610 - NM_006421 ARFGEF1 1 0.31 0.32 17 6.87 79.87 50 6.6 Yes 48 1.39 Yes 0 0 No -30 0.92 Yes 40 96.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 68130370 - NM_006421 ARFGEF1 1 0.35 0.31 17 1.11 0 22 5.38 No 6 1.2 Yes 0 0 No -25 0.87 Yes 45 90.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 68139435 - NM_006421 ARFGEF1 1 0.27 0.19 11 8.58 78.29 18 5.83 Yes 33 0.67 No 0 0 No -28 0.41 No 48 55.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 68163680 - NM_006421 ARFGEF1 1 0.26 0.36 20 -0.45 0 9 3.87 No 13 1.25 Yes 0 0 No -25 0.73 Yes 45 90.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 68163701 - NM_006421 ARFGEF1 1 0.21 0.28 15 1.08 58.96 28 6.26 Yes 15 0.29 No 19 0.93 Yes -28 0.8 Yes 42 78.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 68188110 - NM_006421 ARFGEF1 1 0.09 0.11 7 10.37 86.5 37 6.58 Yes 24 0.91 Yes 0 0 No -36 0.49 No 34 82.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 68219515 - NM_006421 ARFGEF1 1 0.25 0.21 14 9.58 83.56 30 6.98 Yes 1 0.65 No 0 0 No -29 0.88 Yes 41 93.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 68232748 - NM_006421 ARFGEF1 1 1.23 1.01 43 5.91 82.66 26 3.78 No 0 0.48 No 0 0 No -20 0.68 Yes 50 82.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47557021 + NM_006420 ARFGEF2 1 0.19 0.13 7 8.2 84.74 54 5.81 Yes 22 -1.59 No 0 0 No -25 0.63 No 45 59.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 47568649 + NM_006420 ARFGEF2 1 0.15 0.18 12 9.66 84.48 24 5.83 Yes 11 0.24 No 0 0 No -23 0.65 No 47 79.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 47570098 + NM_006420 ARFGEF2 1 0.29 0.51 27 3.11 0 9 3.87 No 30 0.56 No 0 0 No -42 0.52 No 28 76.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 47573667 + NM_006420 ARFGEF2 1 0.57 0.63 30 9.9 96.29 31 4.68 No 41 1.02 Yes 0 0 No -23 0.89 Yes 47 90.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47582411 + NM_006420 ARFGEF2 1 22.17 22.24 72 0.28 69.62 36 6.84 Yes 12 0.97 Yes 0 0 No -35 0.77 Yes 35 92.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47582414 + NM_006420 ARFGEF2 1 0.36 0.36 21 -3.12 0 9 3.7 No 15 0.97 Yes 0 0 No -38 0.77 Yes 32 91.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47587625 + NM_006420 ARFGEF2 1 0.1 0.17 10 9.02 85.91 17 6.24 Yes 4 1.07 Yes 30 0.33 Yes -33 0.51 No 37 57.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 47589527 + NM_006420 ARFGEF2 1 0.08 0.11 8 7.46 85.71 23 5.99 Yes 10 0.49 No 0 0 No -22 0.86 Yes 48 76.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47589782 + NM_006420 ARFGEF2 1 0.15 0.26 18 3.91 71.91 25 4.94 No 32 1.77 Yes 0 0 No -24 0.6 No 46 58.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 47607628 + NM_006420 ARFGEF2 1 0.22 0.35 20 8.02 81.18 31 6 Yes 18 0.46 No 0 0 No -30 0.92 Yes 40 89.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47614419 + NM_006420 ARFGEF2 1 0.38 0.43 24 2.49 0 29 7.06 Yes 16 1.72 Yes 0 0 No -28 0.91 Yes 42 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47621938 + NM_006420 ARFGEF2 1 0.11 0.18 8 4.49 65.78 45 6.4 Yes 2 0.87 Yes 0 0 No -18 0.58 No 41 55.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 47626140 + NM_006420 ARFGEF2 1 0.15 0.22 14 9.2 85.53 34 5.64 Yes 18 0.01 No 0 0 No -31 0.57 No 39 66.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 47628507 + NM_006420 ARFGEF2 1 0.38 0.54 29 7.05 93.04 16 4.97 No 75 1.09 Yes 0 0 No -19 0.6 No 51 89.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 47639562 + NM_006420 ARFGEF2 1 0.22 0.33 19 4.66 70.81 13 5.47 No 0 0.98 Yes 20 0.44 Yes -23 0.81 Yes 47 80.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 47639592 + NM_006420 ARFGEF2 1 0.24 0.38 21 -1.71 0 39 4.58 No 30 0.98 Yes 0 0 No -35 0.42 No 35 44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 47639606 + NM_006420 ARFGEF2 1 0.92 1.42 51 -1.21 70.9 17 4.8 No 44 0.99 Yes 0 0 No -25 0.73 Yes 45 81.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 153711910 + NM_014447 ARFIP1 1 5.78 0.69 34 3.31 0 42 7.34 Yes 29 2.27 Yes 0 0 No -33 0.7 Yes 37 64.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 153728355 + NM_014447 ARFIP1 1 3.57 0.39 18 9.44 85.86 32 5.46 No 19 1.32 Yes 23 0.75 Yes -31 0.66 No 47 48.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 153752616 + NM_014447 ARFIP1 1 0.34 0.18 10 -1.5 85.08 34 5.41 No 21 0.91 Yes 0 0 No -34 0.4 No 36 77.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 153752622 + NM_014447 ARFIP1 1 0.67 0.31 16 -1.65 0 13 3.84 No 27 0.91 Yes 0 0 No -40 0.44 No 30 83.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 153757204 + NM_014447 ARFIP1 1 0.29 0.17 12 4.15 72.43 22 2.89 No 1 1.12 Yes 0 0 No -24 0.84 Yes 46 86.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 153791904 + NM_014447 ARFIP1 1 45.01 20.53 72 10.02 92.45 19 4.5 No 60 1.78 Yes 25 0.88 Yes -25 0.95 Yes 45 96.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 153803878 + NM_014447 ARFIP1 1 0.28 0.17 10 -2.96 0 20 5.23 No 7 1.09 Yes 0 0 No -24 0.63 No 46 59.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 153806550 + NM_014447 ARFIP1 1 1.08 0.63 31 4.8 81.18 27 5.53 No 14 0.47 No 0 0 No -26 0.62 No 44 70.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 153806553 + NM_014447 ARFIP1 1 0.55 0.33 23 1.97 82.31 30 5.79 Yes 17 0.47 No 0 0 No -29 0.58 No 41 71.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 153818837 + NM_014447 ARFIP1 1 0.41 0.19 12 9.15 86.01 79 7.66 Yes 30 0.97 Yes 0 0 No -28 0.85 Yes 42 91.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 6498092 - NM_001242854 ARFIP2 1 0.13 0.14 8 8.4 83.3 31 5.57 Yes 18 0 No 0 0 No -30 0.93 Yes 40 95.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 6498631 - NM_001242854 ARFIP2 1 0.26 0.28 16 6.02 66.79 28 7.34 Yes 15 2.4 Yes 0 0 No -27 0.81 Yes 43 89.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 6499883 - NM_001242854 ARFIP2 1 3.06 3.11 67 11.34 82.94 21 4.6 No 8 1.3 Yes 20 0.81 Yes -20 0.82 Yes 50 74.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 6501654 - NM_001242854 ARFIP2 1 112.05 40.29 72 1.77 71.48 20 5.5 No 7 -0.36 No 27 0.63 Yes -19 0.62 No 51 70.93 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr20 62332107 - NM_001267548 ARFRP1 1 0.15 0.22 13 3.44 80.05 19 4.8 No 6 -0.63 No 0 0 No -18 0.76 Yes 52 67.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 62333248 - NM_001267548 ARFRP1 1 2.36 2.64 64 -0.72 0 33 6.24 Yes 74 0.24 No 0 0 No -32 0.91 Yes 38 86.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62333251 - NM_001267548 ARFRP1 1 3.58 4.06 67 -0.2 71.11 30 6 Yes 71 0.25 No 27 0.89 Yes -29 0.91 Yes 41 88.28 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 62333609 - NM_001267548 ARFRP1 1 0.09 0.13 9 5.93 83.28 32 5.83 Yes 44 0.81 Yes 28 0.85 Yes -31 0.82 Yes 39 72.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 62337144 - NM_001267548 ARFRP1 1 0.68 1 42 7.38 89.29 24 5 No 68 -3.41 No 23 0.93 Yes -23 0.89 Yes 47 79.9 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 107209965 - NM_018011 ARGLU1 1 3.48 6.08 72 0.08 69.38 22 5.1 No 9 0.86 Yes 21 0.95 Yes -21 0.88 Yes 49 95.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46700795 - NM_004308 ARHGAP1 1 0.24 0.32 16 7.44 84.48 11 5.52 No 34 0.24 No 21 0.69 Yes -21 0.78 Yes 49 81.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46701382 - NM_004308 ARHGAP1 1 0.09 0.11 7 9.2 82.41 28 5.48 No 63 -5.26 No 27 0.84 Yes -23 0.85 Yes 47 79.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46701922 - NM_004308 ARHGAP1 1 0.5 0.47 24 3.85 75.05 16 5.21 No 3 1.04 Yes 0 0 No -22 0.79 Yes 48 50.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 46716015 - NM_004308 ARHGAP1 1 0.12 0.15 9 9.19 82.42 21 5.83 Yes 44 1.4 Yes 0 0 No -21 0.88 Yes 49 86.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 148744081 + NM_024605 ARHGAP10 1 0.83 0.68 34 4.42 74.36 26 5.81 Yes 41 0.77 Yes 0 0 No -25 0.83 Yes 45 91.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 148775826 + NM_024605 ARHGAP10 1 3.69 3.4 67 6.57 85.69 33 5.99 Yes 35 -1.93 No 0 0 No -32 0.57 No 41 55.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 148786000 + NM_024605 ARHGAP10 1 0.69 1.08 43 -0.16 0 26 6.41 Yes 51 1.59 Yes 0 0 No -25 0.67 Yes 45 80.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 148787880 + NM_024605 ARHGAP10 1 0.66 0.74 34 7.85 94.86 21 5.2 No 32 1.71 Yes 0 0 No -20 0.52 No 26 45.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 148787904 + NM_024605 ARHGAP10 1 0.24 0.28 15 9.35 90.33 16 4.9 No 56 1.71 Yes 0 0 No -26 0.74 Yes 44 81.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 148802985 + NM_024605 ARHGAP10 1 0.14 0.19 12 -8.96 0 24 3.18 No 41 0.47 No 26 0.74 Yes -23 0.55 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 148822925 + NM_024605 ARHGAP10 1 0.19 0.17 11 10.55 88.4 27 3.18 No 75 0.84 Yes 0 0 No -22 0.84 Yes 48 79.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 148828161 + NM_024605 ARHGAP10 1 0.1 0.14 9 6.5 83.63 32 6.35 Yes 46 1.22 Yes 0 0 No -31 0.47 No 39 65.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 148831203 + NM_024605 ARHGAP10 1 0.22 0.29 17 3.75 84.95 27 5.2 No 53 1.12 Yes 0 0 No -26 0.75 Yes 44 68.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 148886178 + NM_024605 ARHGAP10 1 0.78 1.13 43 -5.62 0 60 8.81 Yes 47 1.98 Yes 0 0 No -59 0.81 Yes 11 69.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 148887852 + NM_024605 ARHGAP10 1 0.27 0.22 14 3.18 74 30 5.42 No 40 0.31 No 0 0 No -29 0.57 No 41 46.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 148896641 + NM_024605 ARHGAP10 1 0.23 0.25 13 5.18 89.84 12 5 No 31 -1.71 No 0 0 No -23 0.48 No 50 41.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 148911169 + NM_024605 ARHGAP10 1 0.24 0.28 17 6.78 78.01 31 5.58 Yes 18 0.22 No 0 0 No -30 0.89 Yes 40 93.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 148913084 + NM_024605 ARHGAP10 1 0.14 0.15 10 8.5 95.72 28 5.66 Yes 55 0.78 Yes 0 0 No -27 0.93 Yes 43 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 148918554 + NM_024605 ARHGAP10 1 0.2 0.24 14 3.11 80.72 21 4.48 No 4 0.36 No 0 0 No -20 0.39 No 50 48.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 148984303 + NM_024605 ARHGAP10 1 0.2 0.13 7 -0.44 0 34 9.78 Yes 21 1.01 Yes 28 0.79 Yes -33 0.77 Yes 33 54.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 32917286 + NM_014783 ARHGAP11A 1 0.2 0.36 21 -2.09 0 14 3.87 No 49 1.34 Yes 0 0 No -28 0.9 Yes 42 86.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 32925263 + NM_014783 ARHGAP11A 1 4.05 4.67 66 7.29 90.53 57 5.19 No 32 0.9 Yes 28 0.89 Yes -28 0.96 Yes 42 96.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 30924013 + NM_001039841 ARHGAP11B 1 0.81 0.19 14 3.01 0 35 8.52 Yes 22 1.9 Yes 0 0 No -34 0.63 No 36 66.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 30927266 + NM_001039841 ARHGAP11B 1 0.31 0.1 7 3.12 68.45 40 8.77 Yes 27 1.35 Yes 22 0.96 Yes -39 0.63 No 31 68.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 30927511 + NM_001039841 ARHGAP11B 1 13.75 3.56 61 8.85 85.46 30 4.27 No 31 0.78 Yes 29 0.66 Yes -29 0.62 No 41 60.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 30928813 + NM_001039841 ARHGAP11B 1 1.01 0.33 18 6.29 82.05 25 5.73 Yes 12 0.5 No 0 0 No -24 0.77 Yes 46 89.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 32128248 - NM_001270699 ARHGAP12 1 174.43 14.67 72 10.95 97.05 30 6.84 Yes 17 0.85 Yes 29 0.73 Yes -29 0.4 No 41 38.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 32139793 - NM_001270699 ARHGAP12 1 0.63 0.22 13 8.38 81.06 52 10.17 Yes 2 0.61 No 0 0 No -30 0.68 Yes 40 53.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 32143135 - NM_001270699 ARHGAP12 1 101 18.24 72 6.89 74.14 38 6.01 Yes -1 1.58 Yes 20 0.49 Yes -37 0.53 No 50 73.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 32168170 - NM_001270699 ARHGAP12 1 0.41 0.17 12 5.74 84.03 23 5.83 Yes 10 1.15 Yes 0 0 No -22 0.81 Yes 48 89.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 143897359 + NM_018460 ARHGAP15 1 0.15 0.24 14 10.25 94.16 35 5.79 Yes 38 0.56 No 0 0 No -27 0.7 Yes 46 70.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 143901159 + NM_018460 ARHGAP15 1 0.18 0.32 15 10.69 91.82 44 6.48 Yes 57 1.17 Yes 0 0 No -33 0.68 Yes 37 72.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 143913050 + NM_018460 ARHGAP15 1 0.16 0.26 15 1.03 0 32 6.41 Yes 19 0.69 No 0 0 No -31 0.45 No 39 58.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 143925456 + NM_018460 ARHGAP15 1 0.11 0.21 11 10.44 96.42 27 5.27 No 39 -2.29 No 0 0 No -26 0.64 No 44 84.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 143914600 + NM_018460 ARHGAP15 1 0.08 0.13 9 2.4 70.53 31 7.31 Yes 18 1.5 Yes 0 0 No -30 0.78 Yes 40 88.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 143925456 + NM_018460 ARHGAP15 1 0.54 0.89 31 10.44 96.42 27 5.27 No 39 -2.29 No 0 0 No -26 0.64 No 44 84.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 143981580 + NM_018460 ARHGAP15 1 0.16 0.32 18 10.18 86.18 20 5.16 No 7 0.28 No 0 0 No -30 0.86 Yes 40 78.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 144003919 + NM_018460 ARHGAP15 1 0.14 0.26 15 4.74 79.73 36 6.82 Yes 23 1.01 Yes 0 0 No -35 0.57 No 47 49.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 144013483 + NM_018460 ARHGAP15 1 0.14 0.11 8 8.33 91.34 25 5.2 No 12 1.69 Yes 0 0 No -24 0.94 Yes 46 97.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 144014983 + NM_018460 ARHGAP15 1 0.19 0.17 12 6.49 83.08 32 6.11 Yes -3 0.85 Yes 0 0 No -31 0.85 Yes 39 89.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 144015296 + NM_018460 ARHGAP15 1 0.33 0.33 20 5.85 80.58 30 8.49 Yes 74 -3.24 No 0 0 No -30 0.9 Yes 40 81.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 144053684 + NM_018460 ARHGAP15 1 0.27 0.32 21 9.83 85.66 50 5.49 No 37 1.82 Yes 0 0 No -30 0.53 No 30 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 144075596 + NM_018460 ARHGAP15 1 1.22 1.43 57 8.76 86.37 31 9.98 Yes 18 0.59 No 0 0 No -23 0.45 No 33 44.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 144088611 + NM_018460 ARHGAP15 1 0.2 0.22 14 6.19 83.7 22 5.4 No 53 0.53 No 0 0 No -21 0.86 Yes 49 91.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 144092380 + NM_018460 ARHGAP15 1 0.14 0.18 10 2.01 74.19 79 8.82 Yes 66 0.65 No 0 0 No -32 0.5 No 38 66.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 144146936 + NM_018460 ARHGAP15 1 0.1 0.13 8 9.31 88.16 22 5.53 No 57 1.08 Yes 0 0 No -21 0.8 Yes 41 61.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 144194459 + NM_018460 ARHGAP15 1 0.18 0.21 9 0.44 67.42 12 4.69 No 17 0.86 Yes 24 0.84 Yes -35 0.63 No 35 82.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 144261319 + NM_018460 ARHGAP15 1 0.15 0.14 9 7.39 89.77 17 5.45 No -2 0.89 Yes 0 0 No -22 0.45 No 48 62.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 144290821 + NM_018460 ARHGAP15 1 1.19 1.49 53 4.69 71.6 29 5.63 Yes 37 0.65 No 28 0.66 Yes -28 0.81 Yes 42 80.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 144318524 + NM_018460 ARHGAP15 1 0.09 0.11 8 4.06 82.44 25 5.2 No 12 1.36 Yes 0 0 No -24 0.79 Yes 46 94.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 144381704 + NM_018460 ARHGAP15 1 0.34 0.42 25 2.19 80.07 40 6.4 Yes 39 0.87 Yes 0 0 No -39 0.58 No 45 41.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 144382626 + NM_018460 ARHGAP15 1 0.18 0.18 9 6.89 77.71 16 6.61 Yes 73 0.07 No 0 0 No -30 0.47 No 46 61.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 144463120 + NM_018460 ARHGAP15 1 0.67 0.85 42 10.56 88.22 16 5.72 Yes 3 1.08 Yes 0 0 No -23 0.69 Yes 47 73.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 24939054 - NM_001006634 ARHGAP17 1 22.49 34.75 72 4.64 63.35 28 6.49 Yes 15 0.69 No 27 0.83 Yes -27 0.84 Yes 43 90.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 24940982 - NM_001006634 ARHGAP17 1 13.17 19.75 72 10.52 82.81 40 6.08 Yes 68 1.21 Yes 31 0.37 Yes -31 0.78 Yes 39 71.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 24958915 - NM_001006634 ARHGAP17 1 0.04 0.18 10 -10.32 0 39 6.32 Yes -2 0.55 No 0 0 No -38 0.33 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 24960799 - NM_001006634 ARHGAP17 1 0.1 0.36 23 4.23 0 10 4 No 69 0.66 No 0 0 No -25 0.89 Yes 45 92.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 24960804 - NM_001006634 ARHGAP17 1 0.04 0.13 8 -23.44 0 20 4.16 No 64 0.67 No 0 0 No -20 0.83 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 24960819 - NM_001006634 ARHGAP17 1 0.04 0.17 11 2.37 68.15 22 4.94 No 49 0.66 No 18 0.79 Yes -22 0.82 Yes 48 71.46 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 24966370 - NM_001006634 ARHGAP17 1 0.3 0.93 40 5.01 84.64 54 8.12 Yes 41 0.32 No 0 0 No -26 0.53 No 49 35.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 24971067 - NM_001006634 ARHGAP17 1 0.06 0.18 11 -2.05 0 10 4 No 32 2.16 Yes 0 0 No -44 0.85 Yes 26 96.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 24979092 - NM_001006634 ARHGAP17 1 0.18 0.42 24 2.11 0 62 8 Yes 49 1.79 Yes 0 0 No -57 0.75 Yes 13 65.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 24980090 - NM_001006634 ARHGAP17 1 0.77 1.26 52 -4.07 0 41 5.13 No 36 0.2 No 36 0.25 Yes -43 0.67 Yes 27 80.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 25025278 - NM_001006634 ARHGAP17 1 2.37 3.75 69 10.09 96.09 36 6 Yes 55 1.3 Yes 29 0.41 Yes -23 0.41 No 47 54.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 129906425 - NM_033515 ARHGAP18 1 0.17 0.13 9 2.3 83.14 45 7.82 Yes 32 1.5 Yes 0 0 No -37 0.55 No 33 70.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 129927556 - NM_033515 ARHGAP18 1 0.35 0.22 13 6.93 91.12 23 4.58 No 29 1.11 Yes 0 0 No -22 0.92 Yes 48 85.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 129961584 - NM_033515 ARHGAP18 1 0.32 0.25 14 6.4 75.33 38 5.45 No 13 2.08 Yes 0 0 No -25 0.74 Yes 33 59.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 130009481 - NM_033515 ARHGAP18 1 0.21 0.17 10 7.56 72.77 31 4.89 No 18 0.33 No 0 0 No -23 0.51 No 39 36.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 99025092 - NR_037909 ARHGAP19-SLIT1 1 0.22 0.14 8 8.35 86.16 22 6.74 Yes 9 2.11 Yes 0 0 No -21 0.87 Yes 49 89.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 24887169 - NM_020824 ARHGAP21 1 0.34 0.18 10 6.43 75.4 31 5.63 Yes 18 0.14 No 0 0 No -30 0.63 No 40 64.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 24889718 - NM_020824 ARHGAP21 1 0.43 0.14 9 5.32 76.88 16 5.38 No 3 1.28 Yes 25 0.76 Yes -22 0.83 Yes 48 81.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 24898461 - NM_020824 ARHGAP21 1 2.64 1 41 4.12 78.91 32 6.16 Yes 50 0.77 Yes 0 0 No -31 0.84 Yes 39 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 24899295 - NM_020824 ARHGAP21 1 0.65 0.25 15 8.87 94.29 34 4.75 No 70 1.39 Yes 0 0 No -33 0.31 No 42 38.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 24939885 - NM_020824 ARHGAP21 1 1.02 0.46 25 9.43 89.42 29 5.83 Yes 16 1.5 Yes 0 0 No -28 0.9 Yes 42 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 24954706 - NM_020824 ARHGAP21 1 0.61 0.17 11 9.35 81.66 16 5.52 No 3 1.63 Yes 0 0 No -31 0.8 Yes 39 82.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 25011155 - NM_020824 ARHGAP21 1 2.18 0.39 22 7.28 89.1 24 6.87 Yes 66 1.49 Yes 0 0 No -23 0.88 Yes 47 81.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 142421089 + NM_001135608 ARHGAP26 1 1.12 0.14 9 6.83 82.97 26 5.28 No 65 0.7 No 25 0.7 Yes -26 0.64 No 44 78.65 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 142437386 + NM_001135608 ARHGAP26 1 5.25 2.1 60 -5.07 0 14 4.36 No 22 1 Yes 38 0.64 Yes -41 0.62 No 17 37.49 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 142437422 + NM_001135608 ARHGAP26 1 2.36 1.07 40 6.49 80.31 39 6.71 Yes 26 1.05 Yes 38 0.64 Yes -38 0.95 Yes 32 95.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 142447930 + NM_001135608 ARHGAP26 1 15.73 6.21 72 10.49 90.37 29 5.2 No 11 0.22 No 0 0 No -28 0.81 Yes 42 74.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 142482753 + NM_001135608 ARHGAP26 1 1.36 0.58 31 8.04 89.7 30 8.05 Yes 17 0.44 No 0 0 No -29 0.87 Yes 41 93.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 142587008 + NM_001135608 ARHGAP26 1 0.92 0.26 12 6.94 93.92 45 5.42 No 75 0.88 Yes 24 0.53 Yes -24 0.36 No 42 48.62 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 142588068 + NM_001135608 ARHGAP26 1 0.99 0.25 15 7.39 85.07 18 6.05 Yes 5 0.09 No 0 0 No -24 0.53 No 46 66.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 142595751 + NM_001135608 ARHGAP26 1 4.9 1.28 51 6.39 90.86 26 5 No 13 1.18 Yes 25 0.86 Yes -25 0.95 Yes 45 93.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 142595754 + NM_001135608 ARHGAP26 1 6.06 1.93 55 7.87 90.75 29 5.29 No 16 1.17 Yes 0 0 No -28 0.93 Yes 42 90.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161021199 - NM_001287602 ARHGAP30 1 0.11 0.22 14 6.29 88.43 17 6.92 Yes 4 2.12 Yes 0 0 No -23 0.72 Yes 47 63.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 119014481 + NM_020754 ARHGAP31 1 0.62 0.33 14 11.17 89.03 29 5.92 Yes 71 0.85 Yes 0 0 No -29 0.72 Yes 41 72.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119021702 + NM_020754 ARHGAP31 1 0.22 0.13 8 10.13 89.9 33 6.55 Yes 20 0.77 Yes 0 0 No -32 0.71 Yes 38 89.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119030446 + NM_020754 ARHGAP31 1 0.72 0.36 19 10.17 95.59 20 3.69 No 15 0.19 No 0 0 No -27 0.6 No 43 67.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 119041241 + NM_020754 ARHGAP31 1 0.29 0.17 10 8.6 82.13 33 4.02 No 20 1.44 Yes 0 0 No -22 0.79 Yes 48 83.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119086288 + NM_020754 ARHGAP31 1 0.35 0.24 14 9.15 86.15 13 5.82 Yes 23 1.49 Yes 0 0 No -24 0.42 No 43 52.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 119089030 + NM_020754 ARHGAP31 1 0.2 0.11 7 4.02 0 20 4.58 No 31 0.64 No 0 0 No -19 0.41 No 51 69.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 119120728 + NM_020754 ARHGAP31 1 4.27 2.94 64 6.16 92.22 26 6 Yes 74 1.94 Yes 0 0 No -22 0.58 No 48 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 47449813 + NM_004491 ARHGAP35 1 0.88 0.61 28 9.7 93.04 46 6.04 Yes 33 1.36 Yes 0 0 No -33 0.66 Yes 37 75.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47472671 + NM_004491 ARHGAP35 1 0.33 0.21 11 5.48 85.01 30 5.39 No 17 0.69 No 0 0 No -22 0.89 Yes 48 90.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 47500753 + NM_004491 ARHGAP35 1 0.31 0.26 17 7.67 84.95 22 5.92 Yes 9 0.74 No 28 0.51 Yes -28 0.65 No 42 73.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 153176472 - NM_001666 ARHGAP4 1 0.12 0.1 7 -2.69 0 13 4.36 No 0 0.1 No 23 0.86 Yes -18 0.37 No 58 47.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153176642 - NM_001666 ARHGAP4 1 0.11 0.13 8 -3.42 72.62 21 4.88 No 8 0.49 No 0 0 No -24 0.48 No 46 44.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153177018 - NM_001666 ARHGAP4 1 1.12 1.17 51 5.99 86.83 22 5.91 Yes 71 -5.1 No 0 0 No -21 0.53 No 49 52.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153178549 - NM_001666 ARHGAP4 1 0.21 0.17 8 3.38 64.62 33 8.76 Yes 20 0.6 No 25 0.58 Yes -32 0.76 Yes 38 91.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153178748 - NM_001666 ARHGAP4 1 0.19 0.13 8 -9.35 0 12 3.87 No 27 1.28 Yes 0 0 No -39 0.92 Yes 31 95.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153178754 - NM_001666 ARHGAP4 1 0.78 0.54 31 -2.68 58.17 34 6.86 Yes 21 1.3 Yes 0 0 No -33 0.96 Yes 37 96.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153178971 - NM_001666 ARHGAP4 1 0.76 0.83 38 8.88 91.2 27 7.14 Yes 14 0.57 No 26 0.9 Yes -26 0.88 Yes 44 85.97 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153179706 - NM_001666 ARHGAP4 1 0.29 0.25 13 9.92 87.58 33 5.91 Yes 20 1.06 Yes 0 0 No -32 0.51 No 38 54.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153179986 - NM_001666 ARHGAP4 1 0.14 0.17 11 7.85 85.61 18 5.37 No 5 0.49 No 0 0 No -22 0.58 No 48 57.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153184741 - NM_001666 ARHGAP4 1 0.27 0.22 16 -6.38 71.01 28 7.35 Yes 15 0.52 No 30 0.78 Yes -27 0.86 Yes 43 87.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153185141 - NM_001666 ARHGAP4 1 4.15 3.39 68 5.45 84.23 39 5.91 Yes 26 0.81 Yes 28 0.66 Yes -41 0.54 No 29 75.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 153186977 - NM_001666 ARHGAP4 1 0.35 0.26 17 -2.43 0 24 5.48 No 11 0.89 Yes 0 0 No -23 0.95 Yes 47 93.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153187686 - NM_001666 ARHGAP4 1 1.15 0.56 29 5.33 73.56 33 6.58 Yes 20 0.98 Yes 0 0 No -32 0.88 Yes 38 92.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1080691 + NM_001282334 ARHGAP45 1 0.15 0.25 15 -5.58 0 14 4.47 No 11 1.23 Yes 0 0 No -33 0.82 Yes 37 59.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1083151 + NM_001282334 ARHGAP45 1 0.32 0.47 23 -10.88 0 20 4.36 No 25 1.21 Yes 0 0 No -37 0.75 Yes 33 73.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1083274 + NM_001282334 ARHGAP45 1 0.38 0.53 24 3.62 86.56 49 6.1 Yes -1 -1.17 No 23 0.27 Yes -23 0.53 No 31 61.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1083924 + NM_001282334 ARHGAP45 1 0.58 0.85 38 6.92 87.49 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.74 Yes 51 87.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1083950 + NM_001282334 ARHGAP45 1 0.32 0.54 26 3.39 84.63 31 5.74 Yes 33 1.17 Yes 0 0 No -30 0.91 Yes 40 90.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 32586348 + NM_001030055 ARHGAP5 1 0.4 0.18 11 4.1 91.81 26 5.91 Yes 13 0.78 Yes 31 0.72 Yes -25 0.76 Yes 45 73.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 32585953 + NM_001030055 ARHGAP5 1 0.24 0.13 7 5.9 72.05 31 5.58 Yes 6 1.05 Yes 0 0 No -30 0.63 No 40 58.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 32586348 + NM_001030055 ARHGAP5 1 25.32 10.18 72 4.1 91.81 26 5.91 Yes 13 0.78 Yes 31 0.72 Yes -25 0.76 Yes 45 73.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 11191691 - NR_109776 ARHGAP6 1 0.39 0.15 8 9.84 84.16 27 5.74 Yes 66 0.61 No 0 0 No -26 0.86 Yes 44 82.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 11216043 - NR_109776 ARHGAP6 1 0.17 0.1 7 6.31 82.35 63 9.63 Yes 50 0.64 No 0 0 No -21 0.68 Yes 49 55.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 57866350 - NM_001319850 ARHGAP9 1 0.17 0.13 8 7.74 89.55 28 5.2 No 15 1.54 Yes 0 0 No -27 0.57 No 43 68.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 57867957 - NM_001319850 ARHGAP9 1 2.64 1.53 54 5.81 77.64 34 5.45 No 53 1.53 Yes 0 0 No -33 0.79 Yes 37 88.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57868752 - NM_001319850 ARHGAP9 1 0.53 0.32 20 3.27 0 45 6.59 Yes 8 1.56 Yes 23 0.38 Yes -28 0.66 No 26 54.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57869943 - NM_001319850 ARHGAP9 1 1.9 0.89 41 -3.79 0 16 4 No 16 0.8 Yes 21 0.84 Yes -28 0.77 Yes 42 87.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79826820 - NR_125441 ARHGDIA 1 0.14 1.82 55 4.19 81.71 17 4.67 No 58 -1.45 No 22 0.79 Yes -19 0.77 Yes 51 64.94 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 79826928 - NR_125441 ARHGDIA 1 0.14 1.78 52 -1.64 69.02 22 4.6 No 36 2.71 Yes 0 0 No -48 0.65 No 22 39.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 15095628 - NM_001175 ARHGDIB 1 0.02 0.21 12 2.3 80.89 23 5.28 No 38 1.53 Yes 0 0 No -50 0.37 No 20 67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 15098390 - NM_001175 ARHGDIB 1 0.01 0.17 8 4.46 85.5 16 7.58 Yes 3 0.91 Yes 0 0 No -29 0.78 Yes 41 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 15100881 - NM_001175 ARHGDIB 1 0.09 1.47 53 -10.63 76.79 30 5.11 No 42 1.27 Yes 32 0.58 Yes -29 0.31 No 41 33.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 15103653 - NM_001175 ARHGDIB 1 0.17 1.89 58 0.33 0 9 3.87 No 48 1.89 Yes 23 0.66 Yes -30 0.72 Yes 40 88.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 15103658 - NM_001175 ARHGDIB 1 0.01 0.14 9 -9.58 0 26 7.46 Yes 43 1.9 Yes 23 0.66 Yes -25 0.72 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 15105883 - NM_001175 ARHGDIB 1 0.02 0.28 14 -2.87 74.96 54 9.27 Yes 41 2.09 Yes 0 0 No -53 0.67 Yes 17 92.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 15109268 - NM_001175 ARHGDIB 1 0.32 3.69 64 7.88 92 23 6.23 Yes 10 1 Yes 22 0.85 Yes -22 0.94 Yes 48 95.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42401463 + NM_198977 ARHGEF1 1 6.83 2.54 65 12.2 84.19 24 7.35 Yes 11 2.45 Yes 23 0.97 Yes -23 0.95 Yes 47 93.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42402094 + NM_198977 ARHGEF1 1 9 3.4 67 3.23 76.09 27 13.94 Yes 14 2.04 Yes 26 0.94 Yes -26 0.75 Yes 44 86.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42406735 + NM_198977 ARHGEF1 1 2.33 2.96 64 8.9 82.73 26 5.66 Yes 72 0.94 Yes 0 0 No -25 0.62 No 45 77.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 42407459 + NM_198977 ARHGEF1 1 0.11 0.18 12 -2.07 69.36 33 5.83 Yes 20 0.73 No 0 0 No -32 0.91 Yes 38 97.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 42407807 + NM_198977 ARHGEF1 1 1.38 2.19 63 6.34 79.31 46 6.87 Yes 47 1.08 Yes 20 0.89 Yes -25 0.76 Yes 45 84.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42407860 + NM_198977 ARHGEF1 1 0.3 0.53 28 0.64 78.56 24 6.62 Yes 11 1.29 Yes 0 0 No -23 0.46 No 33 74.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 42408411 + NM_198977 ARHGEF1 1 0.08 0.1 7 5.51 81.24 21 7.14 Yes 51 0.25 No 0 0 No -23 0.83 Yes 47 75.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 42409305 + NM_198977 ARHGEF1 1 0.07 0.11 7 4.51 84.09 10 5.74 Yes -3 1.15 Yes 30 0.71 Yes -28 0.61 No 42 51.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 156925595 - NM_198236 ARHGEF11 1 7.04 1.53 42 4.46 83 24 4.87 No 44 -2.78 No 23 0.52 Yes -22 0.58 No 48 55.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 120288237 + NM_001301084 ARHGEF12 1 10.83 1.07 43 4.74 84.41 28 5.2 No 15 1.29 Yes 0 0 No -27 0.91 Yes 43 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 120289707 + NM_001301084 ARHGEF12 1 1.86 0.21 10 8.71 94.29 39 9.35 Yes 26 0.69 No 0 0 No -38 0.94 Yes 32 93.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 120288237 + NM_001301084 ARHGEF12 1 2.28 0.21 10 4.74 84.41 28 5.2 No 15 1.29 Yes 0 0 No -27 0.91 Yes 43 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 120298792 + NM_001301084 ARHGEF12 1 0.13 0.14 8 3.72 76.21 24 4.45 No 52 1.1 Yes 0 0 No -56 0.36 No 14 58.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 120317660 + NM_001301084 ARHGEF12 1 0.07 0.11 7 2.62 0 29 5.91 Yes 69 -1.84 No 0 0 No -28 0.43 No 42 75.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 120336200 + NM_001301084 ARHGEF12 1 0.27 0.33 19 3.83 0 21 6.59 Yes 8 1.44 Yes 0 0 No -30 0.89 Yes 40 94.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 120348942 + NM_001301084 ARHGEF12 1 1.56 1.08 48 -3.43 67.4 24 4.3 No 21 0.57 No 0 0 No -23 0.75 Yes 43 63.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 120355149 + NM_001301084 ARHGEF12 1 0.38 0.31 18 1.41 79.54 67 8.37 Yes 54 1.1 Yes 0 0 No -33 0.38 No 49 36.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7466616 + NM_015318 ARHGEF18 1 0.25 0.1 7 9.48 86.68 26 5.29 No 13 0.99 Yes 0 0 No -25 0.84 Yes 45 96.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7475411 + NM_015318 ARHGEF18 1 0.33 0.14 8 7.27 80.55 30 5.27 No 31 0.9 Yes 0 0 No -29 0.49 No 41 73.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 7486001 + NM_015318 ARHGEF18 1 0.47 0.22 13 7.66 90.51 20 5.56 Yes 7 1.07 Yes 0 0 No -24 0.88 Yes 46 86.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7502011 + NM_015318 ARHGEF18 1 0.59 0.25 16 7.25 86.02 22 5.69 Yes 21 1.82 Yes 0 0 No -21 0.61 No 49 59.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7505074 + NM_015318 ARHGEF18 1 11.21 4.79 72 11.1 89.5 17 5.89 Yes 4 -0.13 No 28 0.36 Yes -28 0.67 Yes 42 79.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 7518315 + NM_015318 ARHGEF18 1 0.14 0.14 9 4.87 73.75 28 5.83 Yes 15 0.55 No 0 0 No -27 0.79 Yes 43 85.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 7523430 + NM_015318 ARHGEF18 1 0.36 0.44 28 2.01 68.84 29 5.73 Yes 49 1.01 Yes 0 0 No -28 0.81 Yes 42 51.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 7528039 + NM_015318 ARHGEF18 1 0.24 0.18 12 8.36 84.58 19 6.42 Yes 6 0.84 Yes 0 0 No -18 0.63 No 52 81.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 7534988 + NM_015318 ARHGEF18 1 4.3 2.35 60 0.44 65.21 40 5.83 Yes 58 0.46 No 0 0 No -55 0.19 No 59 21.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 16532063 - NM_153213 ARHGEF19 1 5.13 0.21 15 9.07 87.17 28 6.91 Yes 15 1.68 Yes 0 0 No -27 0.93 Yes 43 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155921322 - NM_001162384 ARHGEF2 1 0.06 0.1 7 -5.93 79.2 40 6.71 Yes 27 0.76 No 0 0 No -39 0.7 Yes 31 79.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155921374 - NM_001162384 ARHGEF2 1 0.07 0.11 8 5.53 73.2 58 7.87 Yes 1 -0.47 No 0 0 No -23 0.68 Yes 47 70.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155932133 - NM_001162384 ARHGEF2 1 0.1 0.17 12 9.03 85.59 38 7.07 Yes 25 0.12 No 0 0 No -37 0.74 Yes 33 79.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155932503 - NM_001162384 ARHGEF2 1 0.07 0.13 7 1.52 0 16 4 No 22 1.13 Yes 0 0 No -29 0.45 No 41 64.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155934923 - NM_001162384 ARHGEF2 1 181.24 96.21 72 3.18 75.63 26 5.66 Yes -4 1.02 Yes 25 0.88 Yes -25 0.85 Yes 45 71.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155935155 - NM_001162384 ARHGEF2 1 0.16 0.21 10 7.38 78.21 39 6.44 Yes 63 0.71 No 0 0 No -38 0.8 Yes 32 72.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155936265 - NM_001162384 ARHGEF2 1 0.13 0.28 15 0.62 0 11 3.87 No 36 0.58 No 0 0 No -48 0.59 No 22 79.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 56789951 - NM_001289698 ARHGEF3 1 0.25 0.15 9 8.82 95.26 24 5.48 No 11 0.39 No 0 0 No -23 0.88 Yes 47 90.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35661997 - NM_032818 ARHGEF39 1 4.91 2.06 56 5.77 82.06 22 6.37 Yes 9 1.89 Yes 0 0 No -21 0.69 Yes 49 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 35662225 - NM_032818 ARHGEF39 1 0.29 0.11 7 7.95 83.34 28 5.21 No 47 0.97 Yes 27 0.83 Yes -27 0.86 Yes 43 96.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 35662342 - NM_032818 ARHGEF39 1 0.72 0.29 15 4.84 63.11 22 4.38 No 9 0.2 No 0 0 No -31 0.75 Yes 39 59.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 135761832 - NM_001306177 ARHGEF6 1 3.64 1.94 55 2.8 73.07 13 3.93 No 67 1.12 Yes 25 0.42 Yes -21 0.43 No 49 57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 135787445 - NM_001306177 ARHGEF6 1 0.2 0.11 7 9.29 94.37 58 8.22 Yes 45 1.52 Yes 0 0 No -57 0.73 Yes 13 77.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 135803028 - NM_001306177 ARHGEF6 1 0.26 0.11 8 11.47 95.65 27 6.25 Yes 14 1.26 Yes 0 0 No -26 0.73 Yes 44 91.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 135813867 - NM_001306177 ARHGEF6 1 0.31 0.18 10 6.67 80.12 13 4.19 No 0 0.68 No 0 0 No -29 0.62 No 41 78.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 135819624 - NM_001306177 ARHGEF6 1 0.62 0.35 19 4.62 84.41 33 5.59 Yes 12 0.78 Yes 24 0.51 Yes -24 0.46 No 42 66.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 135819820 - NM_001306177 ARHGEF6 1 5.36 2.82 65 1.77 81.83 54 7.18 Yes 41 1.2 Yes 0 0 No -26 0.63 No 13 71.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 111860432 + NM_001113512 ARHGEF7 1 0.41 0.53 25 5.98 93.18 28 5.29 No 54 -1.31 No 0 0 No -27 0.55 No 43 64.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111885553 + NM_001113512 ARHGEF7 1 0.13 0.18 7 -2.29 80.27 35 6.05 Yes 22 0.21 No 0 0 No -34 0.51 No 36 55.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111885556 + NM_001113512 ARHGEF7 1 0.1 0.15 8 -4.56 0 38 6.29 Yes 25 0.22 No 0 0 No -37 0.64 No 33 58.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111909913 + NM_001113512 ARHGEF7 1 1.19 2.18 65 11.35 89.74 17 6.08 Yes 4 1.5 Yes 0 0 No -20 0.33 No 50 44.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 111917830 + NM_001113512 ARHGEF7 1 0.1 0.21 12 4.24 82.1 18 6.12 Yes 14 1.51 Yes 26 0.84 Yes -26 0.74 Yes 44 75.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111919173 + NM_001113512 ARHGEF7 1 0.22 0.43 25 9.26 87.42 22 5.41 No 9 0.67 No 21 0.87 Yes -21 0.85 Yes 49 84.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111933166 + NM_001113512 ARHGEF7 1 1.14 0.43 21 10.57 89.28 15 6.24 Yes 2 0.57 No 0 0 No -28 0.52 No 42 52.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111936751 + NM_001113512 ARHGEF7 1 0.29 0.25 14 10.13 85.43 28 5.83 Yes 15 1.18 Yes 0 0 No -27 0.89 Yes 43 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 62862791 - NM_001330495 ARHGEF9 1 0.47 0.19 13 10.56 87.93 36 5.93 Yes 23 0.81 Yes 0 0 No -31 0.72 Yes 39 86.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 62877945 - NM_001330495 ARHGEF9 1 4.94 1.49 52 2.9 69.19 31 6.48 Yes 43 1.03 Yes 0 0 No -30 0.83 Yes 40 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 62923165 - NM_001330495 ARHGEF9 1 1.31 0.36 19 7.11 93.22 15 4.78 No 62 0.56 No 24 0.57 Yes -24 0.84 Yes 46 67.88 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 62923284 - NM_001330495 ARHGEF9 1 6.06 1.75 52 2.52 85.83 23 5.1 No 10 0.04 No 0 0 No -22 0.78 Yes 48 81.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 62923326 - NM_001330495 ARHGEF9 1 1.46 0.46 24 9.79 83.21 22 4.58 No 51 0.34 No 0 0 No -21 0.62 No 49 76.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 62936000 - NM_001330495 ARHGEF9 1 0.66 0.11 7 8.87 86.16 21 5.66 Yes 8 1.12 Yes 0 0 No -20 0.81 Yes 50 89.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 62942778 - NM_001330495 ARHGEF9 1 6.01 1.28 50 7.67 90.68 31 6.76 Yes 18 1.37 Yes 0 0 No -30 0.94 Yes 40 95.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27060598 + NM_006015 ARID1A 1 0.57 0.99 39 7.88 75.35 27 4.8 No 61 1.29 Yes 0 0 No -23 0.69 Yes 47 72.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27087871 + NM_006015 ARID1A 1 1.29 2.49 68 -1.04 80.31 29 5.56 Yes 49 0.99 Yes 23 0.89 Yes -20 0.8 Yes 35 75.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 27099305 + NM_006015 ARID1A 1 66.04 69.39 72 4.74 78.21 27 6.46 Yes 64 1.03 Yes 23 0.91 Yes -26 0.67 Yes 33 68.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 27099866 + NM_006015 ARID1A 1 1.52 2.53 66 8.63 89.5 19 5.39 No 41 1.55 Yes 0 0 No -26 0.43 No 44 54.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 27101470 + NM_006015 ARID1A 1 0.43 0.83 39 3.23 83.03 12 4.76 No 48 0.56 No 21 0.61 Yes -24 0.51 No 49 42.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 27102307 + NM_006015 ARID1A 1 0.1 0.21 12 13.26 85.46 40 6.3 Yes 27 1 Yes 29 0.6 Yes -33 0.67 Yes 37 70.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 27105585 + NM_006015 ARID1A 1 0.05 0.11 7 3.57 78.81 25 5.16 No 62 -5.65 No 0 0 No -24 0.89 Yes 46 94.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 157155786 + NM_001346813 ARID1B 1 0.56 0.64 29 8.01 86.95 34 5.2 No 68 -4.39 No 0 0 No -26 0.58 No 44 69.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 157164543 + NM_001346813 ARID1B 1 0.15 0.18 10 6.68 81.99 31 5.68 Yes 34 0.56 No 0 0 No -26 0.52 No 44 78.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 157191253 + NM_001346813 ARID1B 1 0.27 0.31 16 11.17 89.27 24 5.48 No 11 0.03 No 0 0 No -23 0.89 Yes 47 93.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 157192747 + NM_001346813 ARID1B 1 3.79 4.79 71 11.32 85.13 25 7.21 Yes 33 1.49 Yes 24 0.89 Yes -24 0.51 No 46 49.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 157206417 + NM_001346813 ARID1B 1 0.17 0.18 11 4.8 80.39 23 3.56 No 0 0.18 No 0 0 No -26 0.58 No 48 62.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 157257139 + NM_001346813 ARID1B 1 0.54 0.21 12 8.24 83.84 24 4.09 No 5 0.3 No 0 0 No -23 0.74 Yes 47 76.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 157257635 + NM_001346813 ARID1B 1 1.82 0.78 32 7.96 82.02 19 5.87 Yes 34 0.54 No 0 0 No -19 0.42 No 41 67.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 157276719 + NM_001346813 ARID1B 1 0.35 0.15 9 3.56 78.46 23 6.67 Yes 10 0.94 Yes 0 0 No -22 0.58 No 44 48.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 157305431 + NM_001346813 ARID1B 1 1.32 0.67 28 5.13 89.1 14 5.04 No 1 1.38 Yes 0 0 No -23 0.45 No 41 48.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 157311330 + NM_001346813 ARID1B 1 3.11 1.32 49 7.63 85.05 26 6.54 Yes 13 1.59 Yes 0 0 No -26 0.7 Yes 44 93.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 157316155 + NM_001346813 ARID1B 1 0.32 0.11 8 2.76 83.72 19 4.68 No -3 0.88 Yes 0 0 No -18 0.91 Yes 52 80.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 157347429 + NM_001346813 ARID1B 1 0.45 0.21 12 9.41 94.82 18 5.16 No 5 1.21 Yes 0 0 No -17 0.52 No 49 63.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 157357968 + NM_001346813 ARID1B 1 143.49 66.74 72 8.56 89.57 27 5.41 No 14 0.77 Yes 0 0 No -26 0.6 No 44 62.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 157406137 + NM_001346813 ARID1B 1 0.15 0.21 14 3.44 66.01 31 5.36 No 71 1.35 Yes 0 0 No -26 0.86 Yes 44 90.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 157431636 + NM_001346813 ARID1B 1 0.08 0.11 7 -12.57 0 10 4.47 No 65 1.07 Yes 0 0 No -54 0.54 No 16 69.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 157450445 + NM_001346813 ARID1B 1 0.3 0.38 19 9.34 77.02 23 5.6 Yes 67 0.16 No 0 0 No -26 0.75 Yes 48 69.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 157471858 + NM_001346813 ARID1B 1 1.34 1.22 51 10.28 84.87 28 5.12 No 58 0.25 No 28 0.51 Yes -28 0.51 No 42 57.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 157475188 + NM_001346813 ARID1B 1 0.12 0.11 7 6.28 75.53 44 7.4 Yes 31 1.64 Yes 0 0 No -29 0.89 Yes 41 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 157495159 + NM_001346813 ARID1B 1 1.94 1.42 53 7.76 81.73 21 4.64 No 31 1.39 Yes 0 0 No -49 0.29 No 21 57.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 157507239 + NM_001346813 ARID1B 1 0.46 0.38 21 5.13 92.49 22 5.29 No 9 0.18 No 0 0 No -21 0.85 Yes 49 86.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 157511174 + NM_001346813 ARID1B 1 1.73 1.69 57 0.9 72.46 30 5.08 No 17 1.03 Yes 0 0 No -29 0.82 Yes 41 72.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 157529608 + NM_001346813 ARID1B 1 0.13 0.14 10 10.53 93.29 19 6.46 Yes 6 0.51 No 0 0 No -26 0.46 No 44 47.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46139911 + NM_152641 ARID2 1 0.49 0.4 21 2.71 0 30 5.44 No 17 0.7 No 0 0 No -29 0.83 Yes 41 77.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 46149713 + NM_152641 ARID2 1 0.46 0.32 19 9.16 94.73 30 6 Yes 74 -2.3 No 29 0.54 Yes -29 0.7 Yes 41 81.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 46169863 + NM_152641 ARID2 1 0.4 0.28 14 8.5 93.69 24 6.25 Yes 11 0.32 No 23 0.78 Yes -21 0.59 No 47 65.42 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 46197894 + NM_152641 ARID2 1 0.78 0.53 25 4.11 91.25 20 4.97 No 52 0.44 No 0 0 No -19 0.8 Yes 51 66.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 46221476 + NM_152641 ARID2 1 0.33 0.25 17 2.13 70.63 19 5.41 No -1 0.96 Yes 0 0 No -26 0.71 Yes 44 84.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 46221479 + NM_152641 ARID2 1 0.17 0.15 9 2.93 78.11 22 5.68 Yes 2 0.97 Yes 0 0 No -21 0.52 No 49 63.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 46266579 + NM_152641 ARID2 1 0.38 0.21 13 7.52 87.19 21 5.2 No 8 0.79 Yes 0 0 No -20 0.67 Yes 50 83.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 46287758 + NM_152641 ARID2 1 0.17 0.14 9 5.3 64.09 33 4.98 No 2 0.84 Yes 0 0 No -32 0.57 No 38 48.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 46298124 + NM_152641 ARID2 1 1.1 0.78 33 8 77.55 24 6.48 Yes 11 1.77 Yes 23 0.9 Yes -23 0.92 Yes 47 93.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 947530 + NM_005224 ARID3A 1 0.11 0.14 9 5.86 76.35 30 5.66 Yes 17 0.85 Yes 0 0 No -29 0.82 Yes 41 86.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 966573 + NM_005224 ARID3A 1 0.16 0.21 12 2.11 82.94 25 6.96 Yes 47 0.16 No 0 0 No -25 0.6 No 46 67.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 968602 + NM_005224 ARID3A 1 0.11 0.19 12 7.08 72.63 33 6.24 Yes 75 0.72 No 0 0 No -32 0.82 Yes 38 58.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 74885478 + NM_001307939 ARID3B 1 422.74 42.58 72 6.94 83.05 32 5.92 Yes 19 1.09 Yes 31 0.89 Yes -31 0.84 Yes 39 81.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 74885922 + NM_001307939 ARID3B 1 0.34 0.29 16 12.89 92.02 27 5.36 No 20 1.92 Yes 0 0 No -22 0.66 No 48 82.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 74887777 + NM_001307939 ARID3B 1 0.13 0.11 7 10.02 79.39 32 6.8 Yes 19 0.16 No 0 0 No -37 0.42 No 33 51.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 74889167 + NM_001307939 ARID3B 1 0.21 0.19 12 5.59 77.45 39 9.33 Yes 26 2.23 Yes 0 0 No -38 0.75 Yes 32 93.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 58788117 + NM_023001 ARID4A 1 0.83 0.33 20 3.63 75.94 59 6.2 Yes 29 1.61 Yes 0 0 No -26 0.58 No 44 69.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58791184 + NM_023001 ARID4A 1 0.28 0.13 8 8.64 86.87 19 7.21 Yes 62 -1.6 No 0 0 No -26 0.72 Yes 44 78.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 58818170 + NM_023001 ARID4A 1 0.83 0.25 17 7.13 78.14 33 4.7 No 20 0.01 No 0 0 No -32 0.96 Yes 38 95.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 58818262 + NM_023001 ARID4A 1 1.16 0.46 22 4.91 74.01 23 5.19 No 10 0.24 No 0 0 No -22 0.68 Yes 48 79.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 58821736 + NM_023001 ARID4A 1 0.3 0.13 7 6.22 81.91 38 6.86 Yes 19 1.31 Yes 0 0 No -31 0.77 Yes 39 81.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 235336094 - NM_001206794 ARID4B 1 0.34 0.26 15 1.33 67.93 33 8.43 Yes 20 0.37 No 21 0.85 Yes -32 0.61 No 32 57.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 235340186 - NM_001206794 ARID4B 1 1.29 0.92 38 10.13 92.55 21 6.48 Yes 8 2.44 Yes 0 0 No -20 0.81 Yes 50 90.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 235340219 - NM_001206794 ARID4B 1 3.21 2.31 56 6.18 93.01 17 4.69 No 60 0.34 No 21 0.36 Yes -21 0.71 Yes 49 71.4 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 235344500 - NM_001206794 ARID4B 1 1.81 1.28 47 6.21 82.71 25 5.63 Yes 46 1.14 Yes 24 0.94 Yes -24 0.97 Yes 46 97.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 235401456 - NM_001206794 ARID4B 1 0.39 0.22 11 4.3 84.41 51 8.04 Yes 35 1.63 Yes 0 0 No -50 0.8 Yes 20 86.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 235416124 - NM_001206794 ARID4B 1 0.1 0.11 7 -11.62 0 32 4.42 No 56 0.77 Yes 0 0 No -31 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 235421157 - NM_001206794 ARID4B 1 0.23 0.22 9 13.56 88.39 41 5.62 Yes 20 1.2 Yes 0 0 No -32 0.33 No 38 55.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 235437276 - NM_001206794 ARID4B 1 0.46 0.42 20 8.32 93 26 4.95 No 46 0.68 No 0 0 No -25 0.75 Yes 45 71.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 235451597 - NM_001206794 ARID4B 1 0.22 0.18 10 7.2 92.81 15 4.99 No 2 1.59 Yes 0 0 No -26 0.39 No 44 42.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 235475597 - NM_001206794 ARID4B 1 0.1 0.1 7 3.62 83.2 28 9.8 Yes 15 1.11 Yes 0 0 No -27 0.61 No 43 68.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 235483438 - NM_001206794 ARID4B 1 0.15 0.13 9 10.07 88.27 35 8.12 Yes 22 1.7 Yes 0 0 No -34 0.93 Yes 36 95.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 235489987 - NM_001206794 ARID4B 1 0.13 0.13 7 8.18 88.48 32 5.77 Yes 5 0.62 No 0 0 No -26 0.4 No 49 39.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 97214637 + NM_001319092 ARID5A 1 0.14 0.11 7 6.43 90.52 20 5.08 No 31 0.24 No 0 0 No -23 0.77 Yes 47 87.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 97215711 + NM_001319092 ARID5A 1 0.14 0.17 10 -6.93 0 16 4.12 No 3 0.43 No 0 0 No -15 0.7 Yes 55 72.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 97215762 + NM_001319092 ARID5A 1 0.6 0.71 35 -3.73 69.78 54 7.67 Yes 54 0.78 Yes 0 0 No -53 0.85 Yes 17 85.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97215765 + NM_001319092 ARID5A 1 5.86 7.29 71 0.2 71.28 57 7.86 Yes 57 0.79 Yes 0 0 No -56 0.81 Yes 14 83.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97216341 + NM_001319092 ARID5A 1 0.1 0.17 10 0.98 69.78 37 6.32 Yes 24 -1.05 No 0 0 No -36 0.91 Yes 34 52.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 63805226 + NM_032199 ARID5B 1 0.37 0.13 8 10.62 88.27 27 5.74 Yes 23 0.91 Yes 0 0 No -26 0.43 No 41 70.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 63832434 + NM_032199 ARID5B 1 0.35 0.19 12 7.61 85.31 50 5.73 Yes 21 0.49 No 0 0 No -33 0.89 Yes 37 93.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 63837539 + NM_032199 ARID5B 1 0.3 0.18 11 10.93 95.35 36 5.98 Yes 3 0.62 No 0 0 No -35 0.58 No 35 74.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 72768888 + NM_005744 ARIH1 1 0.33 0.46 25 5.2 85.02 18 5.37 No 10 1.25 Yes 0 0 No -22 0.93 Yes 48 91.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72768891 + NM_005744 ARIH1 1 0.1 0.14 10 3.25 80.12 21 5.64 Yes 13 1.23 Yes 0 0 No -25 0.87 Yes 45 89.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72789131 + NM_005744 ARIH1 1 2.93 4.17 70 10.38 87.15 24 7.78 Yes 11 1.18 Yes 23 0.7 Yes -23 0.72 Yes 43 60.66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 72814741 + NM_005744 ARIH1 1 0.08 0.14 7 2.3 81.97 21 6.08 Yes 8 0.93 Yes 0 0 No -20 0.85 Yes 50 89.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72854524 + NM_005744 ARIH1 1 0.07 0.13 7 10.45 85.09 28 6.48 Yes 15 2.46 Yes 0 0 No -27 0.9 Yes 43 94.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72862504 + NM_005744 ARIH1 1 0.46 1.03 44 2.25 68.62 16 5.39 No 3 0.36 No 22 0.52 Yes -22 0.46 No 51 77.74 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 72864603 + NM_005744 ARIH1 1 0.24 0.35 19 3.28 0 27 6.06 Yes 14 0.9 Yes 26 0.47 Yes -37 0.62 No 33 64.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 72873134 + NM_005744 ARIH1 1 0.21 0.31 18 2.14 71.35 24 6.97 Yes 75 0.41 No 0 0 No -24 0.57 No 41 67.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 48963173 + NM_001317333 ARIH2 1 4.4 0.5 27 3.97 84.41 23 3.96 No 34 0.35 No 0 0 No -22 0.4 No 48 59.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 48964897 + NM_001317333 ARIH2 1 5.31 0.5 27 4.24 74.43 31 6.35 Yes 18 1.63 Yes 0 0 No -30 0.68 Yes 40 88.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48965011 + NM_001317333 ARIH2 1 1.42 0.17 11 -3.18 53.52 23 4.69 No 33 -1.74 No 0 0 No -22 0.52 No 60 25.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 48970998 + NM_001317333 ARIH2 1 0.15 0.17 10 10.75 85.86 27 6.63 Yes 14 1.99 Yes 0 0 No -26 0.95 Yes 44 97.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48980733 + NM_001317333 ARIH2 1 0.09 0.1 7 3.63 72.11 66 7.89 Yes 29 1.51 Yes 0 0 No -22 0.6 No 48 44.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 48982568 + NM_001317333 ARIH2 1 3.16 3.39 69 8.91 95.71 25 5.26 No 12 0.48 No 24 0.54 Yes -24 0.52 No 51 50.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 48964897 + NM_001317333 ARIH2 1 11.25 1.08 44 4.24 74.43 31 6.35 Yes 18 1.63 Yes 0 0 No -30 0.68 Yes 40 88.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48982568 + NM_001317333 ARIH2 1 0.56 0.64 32 8.91 95.71 25 5.26 No 12 0.48 No 24 0.54 Yes -24 0.52 No 51 50.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 48970998 + NM_001317333 ARIH2 1 10.36 11.18 72 10.75 85.86 27 6.63 Yes 14 1.99 Yes 0 0 No -26 0.95 Yes 44 97.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48982568 + NM_001317333 ARIH2 1 14.1 15.38 72 8.91 95.71 25 5.26 No 12 0.48 No 24 0.54 Yes -24 0.52 No 51 50.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 49005493 + NM_001317333 ARIH2 1 0.18 0.11 8 3.32 0 56 8.83 Yes 43 0.42 No 31 0.03 Yes -55 0.82 Yes 15 70.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 49005512 + NM_001317333 ARIH2 1 0.71 0.39 23 5.5 90.92 26 5.29 No 62 0.42 No 0 0 No -25 0.79 Yes 45 73.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49005969 + NM_001317333 ARIH2 1 0.3 0.15 10 -11.88 66.19 24 5.14 No 42 -1.95 No 0 0 No -26 0.86 Yes 44 87.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49019066 + NM_001317333 ARIH2 1 0.36 0.67 35 -6 0 11 3.87 No 45 -3.63 No 28 0.39 Yes -16 0.5 No 60 38.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 49020272 + NM_001317333 ARIH2 1 0.1 0.15 11 6.39 80.53 32 5.95 Yes 71 1.16 Yes 0 0 No -22 0.84 Yes 48 77.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 101789444 - NM_001177 ARL1 1 0.07 0.25 14 1.27 0 30 4.04 No 25 0.36 No 0 0 No -30 0.51 No 43 25.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 101789467 - NM_001177 ARL1 1 0.12 0.44 22 3.71 74.72 39 5.37 No 2 0.34 No 25 0.69 Yes -28 0.64 No 42 79.77 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 101794160 - NM_001177 ARL1 1 0.03 0.11 8 9.81 87.82 56 6.3 Yes 73 1.95 Yes 26 0.05 Yes -55 0.53 No 15 72.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 101797034 - NM_001177 ARL1 1 0.12 0.39 18 7.73 91.99 23 5.69 Yes 69 0.56 No 22 0.8 Yes -22 0.59 No 48 65.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 101801260 - NM_001177 ARL1 1 0.13 0.15 9 8.57 85.91 22 4.82 No 9 0.83 Yes 26 0.84 Yes -21 0.84 Yes 49 92.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 175798815 + NM_173664 ARL10 1 5.61 0.33 19 3.98 87.51 25 5 No 15 0.84 Yes 0 0 No -27 0.84 Yes 46 54.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 175799224 + NM_173664 ARL10 1 7.18 0.56 24 7.37 88.54 16 4.79 No 12 0.77 Yes 0 0 No -24 0.93 Yes 46 95.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 50204169 + NM_138450 ARL11 1 8.82 1.75 61 8.27 91.4 40 7.53 Yes 27 1.9 Yes 28 0.86 Yes -28 0.83 Yes 42 89.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 30348552 + NM_152316 ARL14EP 1 0.22 0.31 15 5.03 81.26 30 6.25 Yes 17 0.67 No 0 0 No -29 0.71 Yes 41 79.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 53407311 - NM_019087 ARL15 1 2.26 0.15 10 7.01 81.24 29 4.86 No 33 0.83 Yes 0 0 No -28 0.77 Yes 42 90.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 53421308 - NM_019087 ARL15 1 0.81 0.14 10 8.86 89.22 21 6.25 Yes 8 1.48 Yes 0 0 No -20 0.87 Yes 50 86.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 53433594 - NM_019087 ARL15 1 1.93 0.28 16 4.23 83.85 33 6.48 Yes 14 0.42 No 0 0 No -32 0.67 Yes 38 93.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 53578158 - NM_019087 ARL15 1 1.75 0.21 11 7.39 86.03 30 6.34 Yes 17 0.55 No 0 0 No -29 0.95 Yes 41 91.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 53603777 - NM_019087 ARL15 1 5.67 0.64 33 10.32 93.86 23 5.39 No 10 0.97 Yes 22 0.79 Yes -22 0.71 Yes 48 78.22 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79649706 - NM_001040025 ARL16 1 43.19 16.81 72 2.14 73.34 67 8.96 Yes -1 0.08 No 33 0.69 Yes -33 0.82 Yes 37 92.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79650149 - NM_001040025 ARL16 1 1.89 0.57 28 -9.58 0 13 4.12 No 56 -2.03 No 0 0 No -41 0.71 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 64805382 + NR_037650 ARL2-SNX15 1 0.3 0.11 8 11.97 96.33 18 4.43 No 49 -1.72 No 0 0 No -27 0.75 Yes 43 66.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 57282326 + NM_012106 ARL2BP 1 0.59 0.71 31 1.17 69.58 21 6.03 Yes 8 0.49 No 0 0 No -20 0.47 No 45 57.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 57282338 + NM_012106 ARL2BP 1 0.22 0.26 15 5.1 0 22 4.56 No 20 0.48 No 0 0 No -17 0.42 No 49 48.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 57282422 + NM_012106 ARL2BP 1 0.11 0.13 8 0.35 68.72 55 5.24 No 42 1.45 Yes 0 0 No -35 0.62 No 35 72.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 57282471 + NM_012106 ARL2BP 1 0.07 0.1 7 -3.1 0 18 4.19 No 33 0.28 No 0 0 No -54 0.44 No 53 47.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 57284303 + NM_012106 ARL2BP 1 0.56 0.75 36 2.81 69.21 21 4.38 No 8 0.86 Yes 28 0.77 Yes -28 0.43 No 50 67.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 57286060 + NM_012106 ARL2BP 1 0.16 0.19 12 -2.09 0 14 4.47 No 52 0.55 No 30 0.23 Yes -13 0.23 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57286064 + NM_012106 ARL2BP 1 0.11 0.14 8 -2.87 0 18 4.9 No 56 0.55 No 30 0.23 Yes -17 0.46 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57286153 + NM_012106 ARL2BP 1 0.93 1.14 49 5.55 86.1 32 6.65 Yes 19 0.55 No 26 0.9 Yes -26 0.84 Yes 44 84.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 104449699 - NM_004311 ARL3 1 0.08 0.14 10 -14.04 0 25 6.89 Yes 12 1.68 Yes 0 0 No -33 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 152663505 - NM_012097 ARL5A 1 0.04 0.18 10 5.77 82.37 34 5.44 No 31 -3.38 No 22 0.83 Yes -27 0.59 No 43 63.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 152667076 - NM_012097 ARL5A 1 0.24 1.11 45 2.39 89.09 22 4.83 No 55 0.62 No 21 0.93 Yes -21 0.96 Yes 49 96.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 152667079 - NM_012097 ARL5A 1 0.08 0.39 19 -0.68 0 19 4.52 No 52 0.63 No 21 0.93 Yes -18 0.93 Yes 52 96.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 152668954 - NM_012097 ARL5A 1 0.06 0.18 11 -10.42 0 26 7.34 Yes 13 1.08 Yes 0 0 No -25 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 152674055 - NM_012097 ARL5A 1 0.35 0.68 31 7.56 85.85 42 7.16 Yes 29 0.58 No 0 0 No -28 0.77 Yes 42 89.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 152684314 - NM_012097 ARL5A 1 0.41 0.85 43 8.15 79.98 28 5.57 Yes 46 0.49 No 0 0 No -27 0.64 No 49 78.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 152684355 - NM_012097 ARL5A 1 0.99 1.99 60 6.22 85.79 18 4.8 No 41 0.77 No 18 0.66 Yes -24 0.49 No 52 47.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 152684436 - NM_012097 ARL5A 1 0.12 0.22 12 4.5 80.28 22 4.69 No 9 1.54 Yes 0 0 No -21 0.93 Yes 49 90.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 18957496 + NM_178815 ARL5B 1 0.54 0.36 20 7.61 81.21 28 3.84 No 6 0.48 No 0 0 No -31 0.37 No 40 54.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 123466141 + NM_001278380 ARL6IP4 1 719.93 196.31 72 7.32 82.15 21 5.74 Yes 8 1.74 Yes 20 0.91 Yes -20 0.78 Yes 45 58.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 123466202 + NM_001278380 ARL6IP4 1 1.37 0.44 20 10.9 88.13 30 5.3 No 69 1.71 Yes 23 0.87 Yes -23 0.86 Yes 47 76.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 123466250 + NM_001278380 ARL6IP4 1 0.41 0.14 9 10.04 86.98 42 6.93 Yes NA NA NA 0 0 No -41 0.67 Yes 29 82.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123466970 + NM_001278380 ARL6IP4 1 0.02 0.1 7 5.85 77.35 35 5.86 Yes 56 -0.84 No 0 0 No -34 0.75 Yes 46 71.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123467170 + NM_001278380 ARL6IP4 1 0.28 1 43 -2.32 0 39 7.62 Yes 26 1.27 Yes 0 0 No -38 0.81 Yes 32 91.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 69138962 + NM_006407 ARL6IP5 1 0.21 0.83 34 10.52 76.55 31 7.28 Yes 18 0.2 No 30 0.83 Yes -30 0.88 Yes 40 89.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 69140632 + NM_006407 ARL6IP5 1 0.04 0.15 11 8.58 87.82 23 6.24 Yes 10 1.01 Yes 0 0 No -22 0.96 Yes 48 96.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 69149122 + NM_006407 ARL6IP5 1 0.04 0.14 8 5.72 90.92 28 5.29 No 42 1.13 Yes 27 0.72 Yes -27 0.78 Yes 43 81.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 69153196 + NM_006407 ARL6IP5 1 0.07 0.29 18 9.36 86.05 15 5.59 Yes 2 1.36 Yes 0 0 No -18 0.3 No 40 51.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 69153597 + NM_006407 ARL6IP5 1 0.03 0.11 8 6.95 80.24 31 5.74 Yes 59 -3.46 No 22 0.96 Yes -31 0.48 No 39 61.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 153576411 + NM_152522 ARL6IP6 1 0.57 0.53 24 6.54 85.82 35 5.99 Yes 22 1.34 Yes 34 0.77 Yes -34 0.61 No 36 74.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 153589044 + NM_152522 ARL6IP6 1 1.41 1.96 61 10.39 85.34 52 9.06 Yes 39 0.76 No 31 0.23 Yes -31 0.67 Yes 39 58.97 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 153591559 + NM_152522 ARL6IP6 1 2.5 3.58 70 5.61 88.04 24 7.74 Yes 11 1.68 Yes 0 0 No -23 0.75 Yes 47 83.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 153591600 + NM_152522 ARL6IP6 1 0.29 0.4 22 7.56 89.88 26 5.55 No 52 1.65 Yes 0 0 No -21 0.89 Yes 49 95.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 153613410 + NM_152522 ARL6IP6 1 0.41 0.58 29 1.39 74.02 25 4.81 No 12 1.38 Yes 0 0 No -24 0.7 Yes 46 60.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 153613413 + NM_152522 ARL6IP6 1 0.32 0.5 28 2.63 76.79 28 5 No 15 1.39 Yes 0 0 No -27 0.78 Yes 43 65.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 153613425 + NM_152522 ARL6IP6 1 0.28 0.42 24 3.65 0 22 4.52 No 27 1.39 Yes 0 0 No -17 0.58 No 53 64.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 202107573 - NM_138795 ARL8A 1 0.14 0.18 11 3.49 0 19 5 No 6 1.17 Yes 0 0 No -24 0.55 No 46 91.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 5170144 + NM_018184 ARL8B 1 0.07 0.13 9 12.92 94.41 34 6.29 Yes 21 0.63 No 22 0.55 Yes -22 0.67 Yes 48 69.16 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 5212191 + NM_018184 ARL8B 1 0.44 0.89 38 3.83 0 30 6.47 Yes 17 1.39 Yes 0 0 No -29 0.75 Yes 41 87.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 5213055 + NM_018184 ARL8B 1 0.08 0.22 13 2.75 83 27 8.91 Yes 14 0.69 No 0 0 No -26 0.77 Yes 44 70.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 5214342 + NM_018184 ARL8B 1 0.06 0.15 10 1.04 0 14 4.33 No 62 0.58 No 0 0 No -32 0.75 Yes 43 51.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 66545233 - NM_018120 ARMC1 1 1.05 1.35 52 7.66 93.92 24 5.09 No 11 0.88 Yes 23 0.94 Yes -23 0.73 Yes 47 52.85 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 102722328 + NM_031905 ARMC10 1 0.71 0.18 11 9.54 92.76 22 4.76 No 9 0.68 No 21 0.67 Yes -21 0.74 Yes 49 69.53 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 102724131 + NM_031905 ARMC10 1 1.7 0.33 21 -0.96 73.72 21 5.18 No 8 1.06 Yes 0 0 No -31 0.44 No 39 77.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 102722328 + NM_031905 ARMC10 1 1.21 0.25 13 9.54 92.76 22 4.76 No 9 0.68 No 21 0.67 Yes -21 0.74 Yes 49 69.53 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 102724131 + NM_031905 ARMC10 1 0.78 0.17 9 -0.96 73.72 21 5.18 No 8 1.06 Yes 0 0 No -31 0.44 No 39 77.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 102724476 + NM_031905 ARMC10 1 1.52 2.67 63 2.51 70.74 31 5.36 No 49 0.62 No 30 0.88 Yes -30 0.69 Yes 40 64.19 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 102727293 + NM_031905 ARMC10 1 0.1 0.1 7 -2.3 65.24 16 5.05 No 29 -2.92 No 27 0.77 Yes -19 0.41 No 55 34.13 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 102727315 + NM_031905 ARMC10 1 3.46 3.38 69 8.51 86.2 28 5.56 Yes 51 -2.63 No 27 0.77 Yes -27 0.67 Yes 43 50.67 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 102733915 + NM_031905 ARMC10 1 0.32 0.47 23 8 84.69 29 5.48 No 16 0.72 No 0 0 No -28 0.95 Yes 42 95.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 102735572 + NM_031905 ARMC10 1 0.67 0.93 36 8.33 90.15 29 6.78 Yes 16 1.34 Yes 0 0 No -28 0.7 Yes 42 83.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 102738112 + NM_031905 ARMC10 1 0.07 0.18 9 5.72 67.44 84 8.54 Yes 71 1.02 Yes 0 0 No -27 0.48 No 36 68.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19148360 + NM_001199196 ARMC6 1 0.45 0.14 9 5.22 81 20 7.14 Yes 7 0.7 No 19 0.73 Yes -19 0.81 Yes 51 87.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19153494 + NM_001199196 ARMC6 1 0.48 0.13 7 1.14 0 25 5.25 No 1 0.81 Yes 31 0.68 Yes -24 0.5 No 46 47.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 19153524 + NM_001199196 ARMC6 1 1.9 0.56 26 0.58 0 37 6.24 Yes 2 2.29 Yes 31 0.68 Yes -36 0.63 No 34 69.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 19148360 + NM_001199196 ARMC6 1 3.2 0.88 37 5.22 81 20 7.14 Yes 7 0.7 No 19 0.73 Yes -19 0.81 Yes 51 87.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19153494 + NM_001199196 ARMC6 1 1.33 0.35 19 1.14 0 25 5.25 No 1 0.81 Yes 31 0.68 Yes -24 0.5 No 46 47.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 19153524 + NM_001199196 ARMC6 1 2.19 0.65 30 0.58 0 37 6.24 Yes 2 2.29 Yes 31 0.68 Yes -36 0.63 No 34 69.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 19156804 + NM_001199196 ARMC6 1 0.09 0.14 10 5.91 76.4 36 8.01 Yes 0 0.66 No 0 0 No -28 0.85 Yes 42 75.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19160474 + NM_001199196 ARMC6 1 3.27 4.81 70 8.94 83.78 31 9.54 Yes 18 1.06 Yes 0 0 No -30 0.6 No 40 58.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19165503 + NM_001199196 ARMC6 1 0.44 0.54 27 5.93 75.55 28 4.85 No 15 0.71 No 0 0 No -27 0.74 Yes 43 82.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19168201 + NM_001199196 ARMC6 1 2.65 2.81 63 1.69 74.35 23 3.5 No 56 0.69 No 20 0.96 Yes -22 0.43 No 53 31.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 19168230 + NM_001199196 ARMC6 1 0.24 0.22 15 -1.09 0 11 3.87 No 14 0.93 Yes 0 0 No -26 0.94 Yes 44 95.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73108869 + NM_001304273 ARMC7 1 11.21 1.07 41 7.61 92.87 34 6.71 Yes 21 1.36 Yes 0 0 No -33 0.91 Yes 37 96.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73110823 + NM_001304273 ARMC7 1 7.55 0.86 38 9.03 86.71 45 6.19 Yes 51 1.12 Yes 30 0.33 Yes -44 0.54 No 26 80 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 137907242 + NM_015396 ARMC8 1 14.01 6.33 72 3.6 70.55 30 6.32 Yes 17 0.65 No 29 0.58 Yes -29 0.54 No 41 57.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 137925516 + NM_015396 ARMC8 1 0.54 0.29 15 8.88 89.29 46 8.95 Yes 70 0.72 No 0 0 No -37 0.26 No 36 26.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 137942249 + NM_015396 ARMC8 1 0.16 0.18 9 3.58 83.3 22 5.29 No 59 0.73 No 0 0 No -39 0.51 No 49 37.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 137943440 + NM_015396 ARMC8 1 0.16 0.24 12 3.86 76.98 28 6.73 Yes 15 0.9 Yes 0 0 No -27 0.46 No 35 46.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 137956324 + NM_015396 ARMC8 1 0.15 0.18 11 -8.86 0 28 6.33 Yes 15 1.09 Yes 0 0 No -27 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 137990878 + NM_015396 ARMC8 1 0.21 0.17 11 8.85 93.68 24 5.44 No 29 0.34 No 0 0 No -23 0.87 Yes 47 92.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 137991893 + NM_015396 ARMC8 1 1.36 1.1 42 4.61 77.11 25 5.29 No 12 0.26 No 24 0.72 Yes -24 0.8 Yes 46 84.25 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 138006473 + NM_015396 ARMC8 1 1.02 0.69 32 9.26 87.62 25 5.38 No 59 0.48 No 24 0.38 Yes -27 0.35 No 43 54.19 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 232079546 + NM_001291656 ARMC9 1 1.28 0.31 16 1.48 77.9 19 5.57 Yes 6 1.61 Yes 0 0 No -24 0.71 Yes 46 58.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 232089842 + NM_001291656 ARMC9 1 0.33 0.1 7 -6.19 50.16 18 4.69 No 44 1.07 Yes 0 0 No -36 0.46 No 34 48.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 232123911 + NM_001291656 ARMC9 1 1.26 0.26 15 8.1 78.89 24 6.05 Yes 1 1.37 Yes 0 0 No -23 0.91 Yes 47 96.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 232134956 + NM_001291656 ARMC9 1 1.3 0.14 8 10.45 82.31 25 6.24 Yes 12 2.61 Yes 0 0 No -24 0.87 Yes 46 91.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 232143345 + NM_001291656 ARMC9 1 0.71 0.13 8 6.86 81.18 33 4.04 No -4 0.22 No 0 0 No -26 0.76 Yes 44 79.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 232153372 + NM_001291656 ARMC9 1 2.1 0.46 21 6.79 80.19 17 6.05 Yes 4 0.8 Yes 28 0.14 Yes -33 0.53 No 37 75.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 232170326 + NM_001291656 ARMC9 1 0.58 0.11 7 6.29 82.14 31 6.1 Yes 18 1.56 Yes 0 0 No -30 0.74 Yes 40 90.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150786713 - NM_001286035 ARNT 1 17.18 12.86 72 9.1 92.65 45 7.66 Yes 32 1.47 Yes 0 0 No -44 0.72 Yes 26 79.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150788877 - NM_001286035 ARNT 1 0.83 0.56 30 -3.57 0 15 3.87 No 22 0.92 Yes 28 0.88 Yes -34 0.65 No 36 73.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 150801652 - NM_001286035 ARNT 1 0.36 0.4 22 4.51 78.12 19 4.51 No 6 1.09 Yes 0 0 No -19 0.43 No 45 41.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150804358 - NM_001286035 ARNT 1 0.08 0.1 7 2.53 77.81 25 5.57 Yes 31 -2.88 No 0 0 No -43 0.35 No 27 19.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 150807141 - NM_001286035 ARNT 1 1.31 1.19 44 1.12 68.82 44 7.07 Yes 47 1.04 Yes 26 0.58 Yes -43 0.7 Yes 27 71.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150815369 - NM_001286035 ARNT 1 0.41 0.19 13 6.95 93.42 14 5.99 Yes 51 1.02 Yes 0 0 No -26 0.63 No 44 81.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 150815401 - NM_001286035 ARNT 1 0.39 0.21 14 7.74 85.73 32 6.81 Yes 19 1.03 Yes 0 0 No -31 0.66 No 39 58.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150825314 - NM_001286035 ARNT 1 1.13 0.47 24 5.64 85.63 29 6.51 Yes 8 0.83 Yes 27 0.9 Yes -28 0.77 Yes 42 81.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150825317 - NM_001286035 ARNT 1 1.48 0.69 34 4.7 86.77 26 6.29 Yes 5 0.82 Yes 25 0.87 Yes -25 0.78 Yes 45 81.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150829511 - NM_001286035 ARNT 1 1.16 0.46 24 11.24 94.18 33 6.15 Yes 16 1.15 Yes 0 0 No -28 0.93 Yes 42 94.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 13343367 + NM_001030272 ARNTL 1 1.85 0.24 13 8.74 79.78 37 7.19 Yes 24 1.82 Yes 0 0 No -36 0.86 Yes 34 88.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 13347959 + NM_001030272 ARNTL 1 52.55 7.38 71 10.99 78.89 30 6.93 Yes 17 2.05 Yes 29 0.92 Yes -29 0.97 Yes 41 96.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 13356517 + NM_001030272 ARNTL 1 0.82 0.11 8 5 0 14 4.47 No 20 0.9 Yes 0 0 No -32 0.66 No 38 61.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 13376719 + NM_001030272 ARNTL 1 1.25 0.19 13 -11.78 81.15 25 4.55 No 29 0.59 No 0 0 No -25 0.64 No 45 81.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 13376772 + NM_001030272 ARNTL 1 18.44 3.35 67 2.47 76.43 26 5.2 No 47 -2.11 No 23 0.83 Yes -23 0.93 Yes 47 78.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 13387074 + NM_001030272 ARNTL 1 2.21 0.58 29 8.52 88.47 31 5.48 No 38 0.4 No 0 0 No -26 0.52 No 47 62.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 13388612 + NM_001030272 ARNTL 1 1.96 0.58 29 12.14 95.11 29 5.38 No 16 1.11 Yes 0 0 No -28 0.64 No 42 79.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 13391243 + NM_001030272 ARNTL 1 2.58 0.71 36 11.17 90.22 19 5.57 Yes 75 -3.69 No 24 0.62 Yes -24 0.62 No 46 62.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 13393709 + NM_001030272 ARNTL 1 182.93 18.63 72 5.31 81.79 22 5.62 Yes 9 1.77 Yes 21 0.94 Yes -21 0.74 Yes 49 78.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 13398091 + NM_001030272 ARNTL 1 1.05 0.26 16 9.28 86.61 32 5.81 Yes 19 0.71 No 31 0.9 Yes -31 0.57 No 39 80.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 13399868 + NM_001030272 ARNTL 1 4.83 1.18 45 10.19 88.3 25 5.57 Yes 12 0.96 Yes 23 0.61 Yes -24 0.6 No 46 91.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 27523061 + NM_001248003 ARNTL2 1 47.88 83.99 72 9.29 93.29 24 5 No 11 1.3 Yes 23 0.95 Yes -23 0.91 Yes 47 95.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 27524304 + NM_001248003 ARNTL2 1 0.4 0.78 38 2.38 73.3 20 5.69 Yes 67 -4.52 No 0 0 No -22 0.43 No 45 48.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27529278 + NM_001248003 ARNTL2 1 5.74 10.32 72 8.73 83.41 25 5.86 Yes 62 1.12 Yes 24 0.75 Yes -34 0.65 No 46 65.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 27530373 + NM_001248003 ARNTL2 1 0.06 0.1 7 11.66 89.12 13 6.68 Yes 37 1.83 Yes 23 0.71 Yes -25 0.53 No 47 69.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 27533181 + NM_001248003 ARNTL2 1 1.55 2.72 64 1.54 79.22 27 5.29 No 73 0.7 No 0 0 No -27 0.66 Yes 43 57.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 27533184 + NM_001248003 ARNTL2 1 0.09 0.14 8 -2.49 0 30 5.57 Yes 76 0.7 No 0 0 No -30 0.63 No 40 50.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27538767 + NM_001248003 ARNTL2 1 0.09 0.21 13 8.43 80.5 33 6.2 Yes 20 1.09 Yes 0 0 No -32 0.65 No 38 84.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 27542116 + NM_001248003 ARNTL2 1 0.03 0.13 8 -1.96 0 36 7.3 Yes 23 0.37 No 0 0 No -35 0.7 Yes 35 66.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 27542206 + NM_001248003 ARNTL2 1 0.25 0.93 37 0.56 68.64 36 6.38 Yes 55 0.77 No 0 0 No -28 0.51 No 42 51.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27553815 + NM_001248003 ARNTL2 1 0.04 0.15 9 13.61 95.02 30 6 Yes 29 0.01 No 0 0 No -29 0.7 Yes 41 84.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 27554464 + NM_001248003 ARNTL2 1 0.13 0.38 18 0.23 0 12 4.11 No 18 1.13 Yes 0 0 No -30 0.7 Yes 40 89.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27557507 + NM_001248003 ARNTL2 1 0.14 0.35 19 3.49 65.48 45 6.74 Yes 75 -3.88 No 0 0 No -32 0.59 No 38 52.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27570650 + NM_001248003 ARNTL2 1 0.03 0.1 7 3.2 89.21 22 5 No 9 0.59 No 0 0 No -21 0.79 Yes 49 73.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 27571023 + NM_001248003 ARNTL2 1 0.08 0.31 18 -7.41 0 33 6.89 Yes 20 1.27 Yes 0 0 No -32 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 98936586 + NM_001190996 ARPC1A 1 0.1 0.26 15 10.01 89.54 23 5.18 No 62 -3.73 No 0 0 No -25 0.72 Yes 47 78.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 98937497 + NM_001190996 ARPC1A 1 0.04 0.11 7 2.24 75.91 27 5.1 No 74 0.68 No 0 0 No -26 0.74 Yes 44 71.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 98946870 + NM_001190996 ARPC1A 1 0.11 0.1 7 7.74 86.87 32 7.92 Yes 19 1.11 Yes 0 0 No -31 0.83 Yes 39 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98946870 + NM_001190996 ARPC1A 1 0.51 0.44 20 7.74 86.87 32 7.92 Yes 19 1.11 Yes 0 0 No -31 0.83 Yes 39 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98951533 + NM_001190996 ARPC1A 1 0.18 0.15 8 -13.84 65.89 39 9.06 Yes 26 0.49 No 31 0.28 Yes -38 0.87 Yes 32 91.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 98955137 + NM_001190996 ARPC1A 1 0.13 0.15 11 8.44 82.99 29 6.4 Yes 16 1.5 Yes 0 0 No -28 0.92 Yes 42 94.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98963095 + NM_001190996 ARPC1A 1 0.09 0.25 15 5.85 82.02 33 5.89 Yes 38 0.26 No 0 0 No -23 0.43 No 37 46.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 98963117 + NM_001190996 ARPC1A 1 0.08 0.21 13 1.36 65.56 15 5 No 2 0.61 No 0 0 No -45 0.35 No 56 60.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 98963534 + NM_001190996 ARPC1A 1 0.62 1.56 58 5.51 0 15 4.58 No 38 1.07 Yes 0 0 No -50 0.73 Yes 20 87.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98974055 + NM_005720 ARPC1B 1 0.13 0.6 34 3.82 68.84 40 6.62 Yes 27 1.3 Yes 31 0.45 Yes -39 0.59 No 31 66.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 98974066 + NM_005720 ARPC1B 1 0.24 1.14 46 5.93 0 19 4.22 No 38 1.31 Yes 31 0.45 Yes -18 0.68 Yes 46 81.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 98974956 + NM_005720 ARPC1B 1 0.11 0.51 30 2.3 84.41 35 7.68 Yes 22 0.66 No 34 0.86 Yes -34 0.94 Yes 36 92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 98974960 + NM_005720 ARPC1B 1 3.8 17.93 72 3.28 0 39 7.94 Yes 26 0.65 No 34 0.86 Yes -38 0.95 Yes 32 91.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 98974980 + NM_005720 ARPC1B 1 3.9 18.57 72 6.55 87.46 27 5.39 No 46 0.64 No 26 0.89 Yes -58 0.61 No 12 83.12 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 98984130 + NM_005720 ARPC1B 1 0.01 0.11 8 -10.51 0 9 3.87 No 19 -1.91 No 0 0 No -14 0.47 No 52 22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 98986277 + NM_005720 ARPC1B 1 0.08 1.17 46 11.94 95.65 28 6.16 Yes 29 0.99 Yes 25 0.63 Yes -25 0.87 Yes 45 89.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 98988649 + NM_005720 ARPC1B 1 0.02 0.14 7 4.83 84.03 41 6.4 Yes 40 -0.87 No 0 0 No -18 0.8 Yes 52 92.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 98989825 + NM_005720 ARPC1B 1 0.02 0.19 11 8.43 90.69 28 8.18 Yes 15 1.03 Yes 0 0 No -27 0.6 No 43 69.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 98991655 + NM_005720 ARPC1B 1 0.71 5.64 71 3.86 0 29 5.4 No 13 0.53 No 24 0.94 Yes -28 0.93 Yes 42 91.46 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 98991924 + NM_005720 ARPC1B 1 0.06 0.35 20 6.43 81.9 21 6.42 Yes 8 1.22 Yes 19 0.96 Yes -20 0.91 Yes 50 93.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 98991965 + NM_005720 ARPC1B 1 0.06 0.35 20 2.56 78.27 20 4.9 No 49 1.21 Yes 19 0.96 Yes -19 0.79 Yes 51 83.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 219091718 + NM_005731 ARPC2 1 0.06 0.82 35 5.64 83.84 34 5.67 Yes 59 -1.27 No 26 0.48 Yes -26 0.43 No 44 57.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 219093502 + NM_005731 ARPC2 1 0.01 0.13 7 -8.45 61.55 47 7.14 Yes 57 0.39 No 29 0.77 Yes -24 0.52 No 24 72.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 219099077 + NM_005731 ARPC2 1 0.02 0.33 19 -13.16 0 38 9.22 Yes 25 1.3 Yes 0 0 No -37 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 219099571 + NM_005731 ARPC2 1 0.11 1.32 50 3.53 87.92 26 5.06 No 43 0.73 No 25 0.48 Yes -25 0.57 No 45 31.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 219099582 + NM_005731 ARPC2 1 0.03 0.43 21 5.19 0 18 4.45 No 54 0.73 No 0 0 No -18 0.81 Yes 53 62.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 219110145 + NM_005731 ARPC2 1 0.01 0.15 11 -19.01 65.75 51 7.47 Yes 38 1.73 Yes 42 0.16 Yes -45 0.91 Yes 25 96.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 219114521 + NM_005731 ARPC2 1 0.01 0.28 15 1.9 69.09 13 5.2 No 34 0.5 No 24 0.8 Yes -18 0.54 No 52 53.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 219117667 + NM_005731 ARPC2 1 0.09 1.96 60 8.8 86.19 35 4.99 No 41 0.4 No 25 0.64 Yes -25 0.81 Yes 36 54.39 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 110873730 - NM_001287222 ARPC3 1 0.13 1.43 55 3.95 76.13 26 3.81 No 53 -3.9 No 0 0 No -21 0.67 Yes 49 73.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110873984 - NM_001287222 ARPC3 1 3.59 0.94 37 0.3 79.97 22 4.77 No 9 0.17 No 0 0 No -21 0.64 No 49 71.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 110874010 - NM_001287222 ARPC3 1 8737.79 2252.81 72 8.88 84.98 17 5.75 Yes 4 0.1 No 27 0.57 Yes -27 0.6 No 43 58.54 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 110874010 - NM_001287222 ARPC3 1 3.42 0.78 25 8.88 84.98 17 5.75 Yes 4 0.1 No 27 0.57 Yes -27 0.6 No 43 58.54 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 110874035 - NM_001287222 ARPC3 1 3.82 0.99 37 0.89 74.14 34 6.08 Yes 65 -4.91 No 27 0.57 Yes -25 0.67 Yes 36 56.19 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 110877632 - NM_001287222 ARPC3 1 0.01 0.15 7 3.33 0 33 5.33 No 48 -2.38 No 0 0 No -32 0.6 No 46 62.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110878188 - NM_001287222 ARPC3 1 0.02 0.26 15 -3.42 0 9 3.87 No 30 1.99 Yes 0 0 No -42 0.89 Yes 28 95.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110880873 - NM_001287222 ARPC3 1 0.26 3.63 71 9.3 86.66 15 5.42 No 2 0.38 No 26 0.78 Yes -24 0.76 Yes 46 55.04 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 110883049 - NM_001287222 ARPC3 1 0.03 0.38 20 10.67 91.95 36 6.29 Yes -2 0.85 Yes 35 0.61 Yes -30 0.28 No 35 60.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 9841562 + NM_001198780 ARPC4 1 0.35 2.78 63 9.29 85.08 22 6.08 Yes 9 1.49 Yes 21 0.77 Yes -28 0.58 No 49 48.85 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 9841624 + NM_001198780 ARPC4 1 0.02 0.14 8 -0.52 0 13 4.36 No 71 1.46 Yes 0 0 No -17 0.2 No 51 17.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 9841910 + NM_001198780 ARPC4 1 0.03 0.28 17 3.19 75.15 35 4.56 No -1 0.47 No 0 0 No -35 0.44 No 35 44.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9845219 + NM_001198780 ARPC4 1 0.07 0.9 42 6.86 75.26 24 8.34 Yes 11 1.17 Yes 0 0 No -23 0.86 Yes 47 74.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9845283 + NM_001198780 ARPC4 1 0.02 0.24 16 3.19 82.95 24 4.8 No 75 1.14 Yes 0 0 No -23 0.76 Yes 47 69.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9845571 + NM_001198780 ARPC4 1 0.03 0.35 22 -2.37 0 39 5.61 Yes 26 0.19 No 0 0 No -24 0.76 Yes 46 54.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 183599727 - NM_005717 ARPC5 1 0.02 0.1 7 6.77 76.75 23 4.99 No 1 1.25 Yes 0 0 No -22 0.87 Yes 48 75.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183602288 - NM_005717 ARPC5 1 0.66 6.15 71 7.66 84.83 53 7.91 Yes 40 0.93 Yes 0 0 No -22 0.46 No 48 81.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 183602299 - NM_005717 ARPC5 1 0.04 0.42 24 -5.79 0 42 7.27 Yes 29 0.95 Yes 24 0.61 Yes -42 0.37 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 127635966 + NM_030978 ARPC5L 1 0.06 0.1 7 -13.4 0 29 5.36 No 74 1.78 Yes 32 0.58 Yes -12 0.78 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 4620992 + NM_001257328 ARRB2 1 0.28 0.18 10 0.31 61.37 16 4.69 No 29 0.45 No 0 0 No -41 0.62 No 31 54.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4623844 + NM_001257328 ARRB2 1 0.95 0.43 20 2.04 79.67 26 5.2 No 37 -1.51 No 25 0.74 Yes -20 0.48 No 46 39.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 140507864 + NM_001317968 ARRDC1 1 4.65 1.58 58 4.33 80.38 25 5.21 No 12 0.44 No 24 0.93 Yes -24 0.78 Yes 46 81.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140507874 + NM_001317968 ARRDC1 1 0.5 0.17 8 -2.73 0 13 4.33 No 22 0.42 No 24 0.93 Yes -47 0.47 No 36 74.19 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 140508432 + NM_001317968 ARRDC1 1 1.7 0.76 37 6.51 80.34 24 5.48 No 52 -2.96 No 23 0.94 Yes -23 0.88 Yes 47 77.53 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140508591 + NM_001317968 ARRDC1 1 1.11 0.53 31 1.78 69.97 40 5.91 Yes 48 -3.75 No 26 0.87 Yes -26 0.74 Yes 44 73.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140512602 - NR_122035 ARRDC1-AS1 1 2.09 0.35 19 3.08 86.71 17 4.69 No 55 0.86 Yes 0 0 No -23 0.57 No 47 50.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18123724 + NM_015683 ARRDC2 1 0.74 0.13 7 -7.06 83.4 23 5.65 Yes 41 0.92 Yes 0 0 No -23 0.87 Yes 47 79.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 51065171 - NM_001085427 ARSA 1 1.6 0.54 27 3.94 76.95 21 4.49 No 26 2.22 Yes 0 0 No -38 0.86 Yes 32 82.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 51065171 - NM_001085427 ARSA 1 0.32 0.13 9 3.94 76.95 21 4.49 No 26 2.22 Yes 0 0 No -38 0.86 Yes 32 82.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 51065418 - NM_001085427 ARSA 1 3.67 1.4 52 2.17 73.26 46 7.75 Yes 33 1.86 Yes 0 0 No -45 0.74 Yes 25 63.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 51065469 - NM_001085427 ARSA 1 0.46 0.19 12 -0.37 0 15 4.58 No 20 1.3 Yes 0 0 No -32 0.96 Yes 38 67.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 78079321 - NM_000046 ARSB 1 0.67 0.25 16 4.41 75.31 29 6.23 Yes 16 -0.7 No 31 0.4 Yes -28 0.8 Yes 42 77.56 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 78111938 - NM_000046 ARSB 1 11.5 4.46 69 10.44 88.21 19 5.35 No 49 -1.05 No 27 0.67 Yes -27 0.77 Yes 43 82.22 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 78120005 - NM_000046 ARSB 1 1.4 0.56 29 8.83 88.82 32 5.59 Yes 0 0.37 No 0 0 No -32 0.68 Yes 38 77.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 78128515 - NM_000046 ARSB 1 0.91 0.33 21 7.67 78.88 31 5.8 Yes 18 1.05 Yes 0 0 No -30 0.92 Yes 40 96.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78131731 - NM_000046 ARSB 1 0.72 0.26 16 8.08 88.59 32 5.74 Yes 74 -4.6 No 0 0 No -31 0.77 Yes 39 90.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 78180952 - NM_000046 ARSB 1 2.17 1.14 40 8.48 79.75 35 6.12 Yes 22 0.09 No 24 0.64 Yes -34 0.82 Yes 36 79.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 78196628 - NM_000046 ARSB 1 0.26 0.15 11 8.62 81.26 23 6.94 Yes 10 1.68 Yes 0 0 No -22 0.86 Yes 48 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78204387 - NM_000046 ARSB 1 0.23 0.14 10 4.68 79.41 34 5.84 Yes 21 1.73 Yes 0 0 No -33 0.87 Yes 37 93.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78251299 - NM_000046 ARSB 1 0.46 0.33 18 7.23 84.4 30 4.99 No 42 0.85 Yes 0 0 No -29 0.77 Yes 41 79.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78254148 - NM_000046 ARSB 1 0.45 0.36 17 11.49 89.55 35 8.12 Yes 22 1.32 Yes 0 0 No -34 0.79 Yes 36 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 66337415 + NM_014960 ARSG 1 2.84 0.38 21 9.11 92.63 33 6.24 Yes 20 0.67 No 0 0 No -32 0.94 Yes 38 95.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 66355628 + NM_014960 ARSG 1 5.36 0.36 17 9.62 85.99 34 8.11 Yes 45 1.28 Yes 36 0.73 Yes -36 0.74 Yes 34 68.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 66364691 + NM_014960 ARSG 1 5.36 0.32 15 -3.94 0 27 6.08 Yes 14 1.08 Yes 0 0 No -26 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 66366789 + NM_014960 ARSG 1 1.6 0.15 8 3.04 78.48 22 4.53 No 69 0.09 No 0 0 No -21 0.83 Yes 49 80.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 66366808 + NM_014960 ARSG 1 2.85 0.15 7 1.28 81.95 26 5.29 No 41 -2.47 No 0 0 No -25 0.66 No 45 52.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 66366896 + NM_014960 ARSG 1 2.02 0.18 11 10.58 81.92 36 6.47 Yes 23 0.78 Yes 0 0 No -35 0.64 No 35 82.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 66375986 + NM_014960 ARSG 1 7.26 0.43 22 12.94 97.24 25 6.24 Yes 12 1.07 Yes 0 0 No -24 0.87 Yes 46 93.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 66392635 + NM_014960 ARSG 1 13.26 0.68 32 7.17 79.35 46 7.68 Yes 33 1.58 Yes 0 0 No -45 0.96 Yes 25 94.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 66395225 + NM_014960 ARSG 1 1.72 0.1 7 7.21 85.59 26 3.84 No 76 0.09 No 0 0 No -25 0.84 Yes 45 82.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94891911 + NM_198150 ARSK 1 56.01 3.03 69 9.85 82.21 29 5.81 Yes 29 0.55 No 28 0.8 Yes -28 0.72 Yes 42 69.11 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 94892046 + NM_198150 ARSK 1 3.14 0.21 12 2.71 86.78 23 5.1 No 10 0.36 No 0 0 No -22 0.93 Yes 48 92.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94916595 + NM_198150 ARSK 1 8.92 0.88 41 6.64 84.19 22 5.92 Yes 40 1.33 Yes 22 0.3 Yes -30 0.48 No 40 34.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 94936328 + NM_198150 ARSK 1 3.6 0.4 19 9.92 87.27 34 5.52 No 3 0.56 No 28 0.39 Yes -28 0.38 No 42 49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 231125895 + NM_001346992 ARV1 1 2.57 2.04 64 3.86 78.76 37 6.11 Yes 56 0.29 No 0 0 No -22 0.62 No 34 60.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 231135368 + NM_001346992 ARV1 1 2.78 3.07 67 10.62 83.15 14 6.02 Yes 74 1.44 Yes 24 0.54 Yes -24 0.61 No 46 66.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 17915154 - NM_177924 ASAH1 1 0.05 0.11 7 0.11 63.98 21 4.58 No 76 -6.74 No 25 0.91 Yes -20 0.54 No 50 48.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 131128261 - NM_001247996 ASAP1 1 0.27 0.1 7 6.83 90.89 23 5.18 No 31 0.18 No 0 0 No -22 0.85 Yes 48 88.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 131220993 - NM_001247996 ASAP1 1 0.37 0.15 8 5.3 80.45 23 5.51 No 10 0.53 No 22 0.65 Yes -22 0.84 Yes 48 88.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 239341953 + NM_001040445 ASB1 1 0.77 0.14 10 9.7 94.82 24 6.97 Yes 11 0.84 Yes 23 0.54 Yes -33 0.49 No 37 62.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 239342189 + NM_001040445 ASB1 1 19.3 3.5 67 2.92 81.06 21 4.69 No 8 1.23 Yes 20 0.97 Yes -20 0.91 Yes 50 95.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42254119 - NR_049729 ASB16-AS1 1 3.03 0.22 13 4.45 81.88 24 6 Yes 11 1.32 Yes 0 0 No -23 0.95 Yes 47 95.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42254122 - NR_049729 ASB16-AS1 1 4.04 0.31 20 8.36 83.99 21 5.74 Yes 8 1.33 Yes 0 0 No -20 0.92 Yes 50 94.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42254667 - NR_049729 ASB16-AS1 1 3.73 0.31 16 8.38 87.63 29 5.92 Yes 29 0.48 No 0 0 No -28 0.92 Yes 42 92.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42257786 - NR_049729 ASB16-AS1 1 2.04 0.18 10 6.62 85.17 27 5.12 No -3 0.45 No 0 0 No -26 0.51 No 44 53.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 42259110 - NR_049729 ASB16-AS1 1 5.54 0.74 34 2.4 0 41 6.86 Yes 28 1.31 Yes 40 0.66 Yes -40 0.56 No 26 76.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 42259110 - NR_049729 ASB16-AS1 1 10.61 1.56 52 2.4 0 41 6.86 Yes 28 1.31 Yes 40 0.66 Yes -40 0.56 No 26 76.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 42260438 - NR_049729 ASB16-AS1 1 10.46 1.08 46 3.08 84 15 5.08 No 2 1.5 Yes 26 0.8 Yes -45 0.61 No 25 74.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 94417637 - NM_001202429 ASB2 1 0.38 0.1 7 2.31 78.81 22 4.8 No 64 -5.41 No 0 0 No -21 0.79 Yes 50 46.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 53912872 - NM_001201965 ASB3 1 0.19 0.17 10 3.26 81.03 25 7.71 Yes 12 0.92 Yes 0 0 No -24 0.65 No 46 65.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 53927680 - NM_001201965 ASB3 1 0.4 0.18 13 1.95 0 24 6 Yes 11 2.22 Yes 0 0 No -23 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 53935092 - NM_001201965 ASB3 1 0.28 0.13 9 3.01 0 70 9.43 Yes 57 2.62 Yes 0 0 No -60 0.81 Yes 10 78.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 53961475 - NM_001201965 ASB3 1 3.31 2.13 59 10.36 92 9 6.08 Yes 58 -2.22 No 0 0 No -31 0.76 Yes 39 70.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 53975505 - NM_001201965 ASB3 1 0.62 0.36 24 3.05 78.03 61 7.81 Yes 65 0.8 Yes 0 0 No -30 0.66 No 40 74.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 48541708 - NM_001319297 ASB8 1 0.86 0.65 31 7.06 83.21 21 6.98 Yes 56 0.16 No 0 0 No -27 0.56 No 43 71.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 48543924 - NM_001319297 ASB8 1 3.03 2.32 61 9.75 88.95 33 6.02 Yes 56 0.94 Yes 32 0.88 Yes -22 0.57 No 48 62.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 48545449 - NM_001319297 ASB8 1 1.05 1.17 44 9.79 89.02 27 4.95 No 14 1.66 Yes 26 0.96 Yes -26 0.91 Yes 44 91.01 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 48547313 - NM_001319297 ASB8 1 665.89 71.56 72 6.59 96.26 34 6.63 Yes 75 -5.28 No 24 0.36 Yes -26 0.6 No 33 65.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 48551041 - NM_001319297 ASB8 1 1.55 0.13 9 7.26 88.53 13 5.83 Yes 0 0.83 Yes 27 0.58 Yes -22 0.66 No 48 42.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 73862171 - NM_001198798 ASCC1 1 2.16 2.56 65 7.71 82.81 28 6.1 Yes 15 0.89 Yes 27 0.85 Yes -27 0.77 Yes 43 85.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 73862726 - NM_001198798 ASCC1 1 17.18 20.75 72 2.52 0 35 4.86 No 16 1.02 Yes 34 0.72 Yes -34 0.7 Yes 36 76.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 73892100 - NM_001198798 ASCC1 1 0.6 0.89 41 6.54 70.95 41 6.3 Yes 57 0.68 No 0 0 No -40 0.69 Yes 30 80.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 73897283 - NM_001198798 ASCC1 1 0.19 0.22 15 4.74 84.41 34 7.81 Yes 21 1.16 Yes 0 0 No -33 0.96 Yes 37 94.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 73939141 - NM_001198798 ASCC1 1 0.24 0.22 14 4.46 79.12 23 8.23 Yes 10 1.54 Yes 0 0 No -22 0.75 Yes 48 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 73958424 - NM_001198798 ASCC1 1 0.29 0.42 24 6.06 68.5 34 7.7 Yes 21 1.45 Yes 29 0.82 Yes -29 0.75 Yes 41 78.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 73964264 - NM_001198798 ASCC1 1 0.47 0.63 31 1.86 64.53 26 6.22 Yes 13 1.18 Yes 25 0.71 Yes -25 0.62 No 45 68.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 73970667 - NM_001198798 ASCC1 1 0.18 0.25 13 6.97 73.98 35 7.68 Yes 74 -3.03 No 0 0 No -34 0.92 Yes 36 91.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 73972044 - NM_001198798 ASCC1 1 0.28 0.42 19 6.27 90.14 28 5.29 No 22 0.54 No 27 0.82 Yes -27 0.65 No 43 67.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 30188506 - NM_032204 ASCC2 1 0.08 0.11 8 6.62 85.06 13 4.97 No 0 1.2 Yes 0 0 No -44 0.54 No 26 60.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 30189468 - NM_032204 ASCC2 1 0.35 0.36 18 0.01 0 20 4.58 No 32 0.75 No 0 0 No -19 0.35 No 46 73.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 30189660 - NM_032204 ASCC2 1 0.16 0.18 13 2.17 0 9 3.87 No 32 1.95 Yes 0 0 No -44 0.89 Yes 26 94.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 30189771 - NM_032204 ASCC2 1 0.1 0.11 8 6.66 79.73 34 6.92 Yes 45 1.25 Yes 0 0 No -33 0.56 No 37 77.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 30198123 - NM_032204 ASCC2 1 1.03 0.86 38 1.55 0 43 8.39 Yes 70 -2.46 No 18 0.2 Yes -29 0.57 No 41 61.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 30198128 - NM_032204 ASCC2 1 0.4 0.38 24 3.97 72.93 38 8.09 Yes -2 0.24 No 18 0.2 Yes -24 0.65 No 52 64.1 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 30198231 - NM_032204 ASCC2 1 0.18 0.15 11 0.96 61.15 15 6.83 Yes 67 -2.64 No 35 0.66 Yes -47 0.32 No 23 31.87 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 30211283 - NM_032204 ASCC2 1 0.25 0.46 24 8.11 84.59 35 4.83 No 74 0.24 No 26 0.57 Yes -29 0.39 No 40 70.46 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 30218065 - NM_032204 ASCC2 1 0.36 0.54 23 11.77 98.88 38 6.63 Yes 73 -2.18 No 27 0.5 Yes -27 0.76 Yes 43 74.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 30218385 - NM_032204 ASCC2 1 0.08 0.14 9 5.69 70.56 24 6.86 Yes 11 1.38 Yes 23 0.55 Yes -27 0.79 Yes 43 79.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 30220169 - NM_032204 ASCC2 1 0.07 0.11 8 10.69 87.15 38 7.25 Yes 25 0.51 No 0 0 No -38 0.39 No 35 63.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 30221697 - NM_032204 ASCC2 1 1.1 0.9 43 2.93 73.44 22 5.19 No 9 0.5 No 0 0 No -21 0.85 Yes 49 78.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 30223590 - NM_032204 ASCC2 1 2.03 1.74 57 7.69 92.03 27 5.09 No 36 1.47 Yes 26 0.87 Yes -26 0.86 Yes 44 52.12 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 30229604 - NM_032204 ASCC2 1 0.75 0.13 8 5.1 81.64 27 6.04 Yes 41 1.39 Yes 26 0.93 Yes -26 0.68 Yes 44 64.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 30230540 - NM_032204 ASCC2 1 107.02 18.78 72 9.83 98.16 46 4.49 No 28 1.21 Yes 32 0.59 Yes -29 0.59 No 41 73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 100960680 - NM_006828 ASCC3 1 1.06 2.08 53 6.2 77.92 31 5.46 No 15 0.69 No 0 0 No -30 0.46 No 44 50.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 101022921 - NM_006828 ASCC3 1 0.05 0.14 9 4.67 80.48 17 6.08 Yes 56 1.03 Yes 0 0 No -16 0.54 No 54 54.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 101075378 - NM_006828 ASCC3 1 0.22 0.65 28 4.6 80.17 24 7 Yes 45 1.48 Yes 0 0 No -23 0.84 Yes 47 84.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 101077056 - NM_006828 ASCC3 1 0.17 0.28 17 -7.13 73.66 23 5.46 No 74 -2.13 No 0 0 No -22 0.76 Yes 48 78.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 101078516 - NM_006828 ASCC3 1 0.19 0.26 8 2.05 72.15 23 4.9 No 57 0.11 No 0 0 No -22 0.97 Yes 48 97.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 101084861 - NM_006828 ASCC3 1 0.97 2.85 67 9.34 85.95 28 5.68 Yes 44 0.7 No 0 0 No -27 0.88 Yes 43 88.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 101090643 - NM_006828 ASCC3 1 0.1 0.26 15 -2.12 0 23 4.64 No 46 -2.5 No 24 0.73 Yes -25 0.75 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 101091993 - NM_006828 ASCC3 1 0.1 0.18 10 -4 60.34 16 4.69 No 48 -1.68 No 0 0 No -34 0.66 No 33 73.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 101099489 - NM_006828 ASCC3 1 0.05 0.13 9 2.07 70.76 28 6.09 Yes 38 0.81 Yes 0 0 No -27 0.59 No 43 74.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 101111584 - NM_006828 ASCC3 1 0.11 0.29 17 4.61 67.08 41 7.55 Yes 28 1.59 Yes 0 0 No -40 0.94 Yes 30 97.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 101135806 - NM_006828 ASCC3 1 0.24 0.61 31 11.1 97.47 23 3.45 No 42 0.6 No 0 0 No -25 0.89 Yes 45 78.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 101162051 - NM_006828 ASCC3 1 0.58 1.47 49 11.72 91.19 17 3.79 No 4 0.61 No 0 0 No -25 0.77 Yes 45 69.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 101163404 - NM_006828 ASCC3 1 0.16 0.5 27 -2.72 0 10 3.87 No 35 0.43 No 0 0 No -39 0.79 Yes 31 84.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 101164685 - NM_006828 ASCC3 1 0.03 0.11 7 8.56 92.03 19 5.51 No 6 0.89 Yes 0 0 No -19 0.44 No 46 59.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 101182401 - NM_006828 ASCC3 1 0.09 0.22 13 9.74 88.62 35 5.02 No 3 0.69 No 0 0 No -27 0.56 No 46 66.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 101197050 - NM_006828 ASCC3 1 0.11 0.28 15 8.21 82.58 26 5.98 Yes 13 1.59 Yes 0 0 No -35 0.77 Yes 35 71.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 101211080 - NM_006828 ASCC3 1 0.25 0.58 24 9.76 84.56 35 6.97 Yes 22 1.91 Yes 0 0 No -34 0.76 Yes 36 92.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 101213062 - NM_006828 ASCC3 1 0.04 0.11 7 7.8 85.85 27 5.26 No 0 0.61 No 0 0 No -27 0.83 Yes 43 80.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 101214598 - NM_006828 ASCC3 1 0.07 0.24 14 -1.69 0 33 5.66 Yes 20 0.41 No 26 0.83 Yes -30 0.69 Yes 40 59.42 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 101215113 - NM_006828 ASCC3 1 1.3 4.1 70 7.9 92.89 17 5.76 Yes 4 1.23 Yes 0 0 No -25 0.41 No 48 43.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 101218350 - NM_006828 ASCC3 1 1.03 3.13 66 5.35 76.34 50 7.49 Yes 37 1.87 Yes 0 0 No -52 0.8 Yes 18 83.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 101247469 - NM_006828 ASCC3 1 0.04 0.14 10 2.43 69.93 16 5.05 No 41 0.51 No 27 0.75 Yes -54 0.25 No 49 63.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 101248360 - NM_006828 ASCC3 1 0.36 1.06 38 2.88 61.84 13 5.2 No 23 0.08 No 0 0 No -55 0.5 No 47 75.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 101253373 - NM_006828 ASCC3 1 0.1 0.28 15 6.98 85.9 37 6.28 Yes 34 -2.06 No 0 0 No -29 0.57 No 41 57.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 101253947 - NM_006828 ASCC3 1 0.07 0.24 16 5.5 83.61 26 5.85 Yes 13 1.05 Yes 0 0 No -29 0.43 No 45 54.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 101295610 - NM_006828 ASCC3 1 0.22 0.67 30 4.25 77.87 48 6.72 Yes -3 0.49 No 0 0 No -19 0.68 Yes 51 55.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 101296973 - NM_006828 ASCC3 1 0.49 1.65 53 8.18 87.59 32 7.09 Yes 37 0.19 No 0 0 No -31 0.87 Yes 39 89.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 101296973 - NM_006828 ASCC3 1 0.06 0.24 12 8.18 87.59 32 7.09 Yes 37 0.19 No 0 0 No -31 0.87 Yes 39 89.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 101297970 - NM_006828 ASCC3 1 0.15 0.57 24 8.11 87 39 6.81 Yes 26 1.16 Yes 0 0 No -38 0.8 Yes 32 84.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 101301775 - NM_006828 ASCC3 1 0.04 0.15 10 8.51 77.28 54 5.27 No 16 0.72 No 0 0 No -32 0.62 No 38 50.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 101307076 - NM_006828 ASCC3 1 0.43 1.39 47 -0.29 78.98 33 7 Yes 70 0.02 No 0 0 No -32 0.75 Yes 38 65.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 101307079 - NM_006828 ASCC3 1 9.53 32.56 72 4.9 80.73 30 6.78 Yes 67 0.02 No 29 0.66 Yes -29 0.81 Yes 41 74.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 101307299 - NM_006828 ASCC3 1 0.75 2.42 60 5.17 77.59 23 5.2 No 10 0.88 Yes 0 0 No -22 0.87 Yes 48 94.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 101313301 - NM_006828 ASCC3 1 0.05 0.13 8 5.59 77.62 29 7.2 Yes 16 0.91 Yes 0 0 No -35 0.35 No 35 58.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 101315909 - NM_006828 ASCC3 1 1.91 4.94 70 6.16 0 9 3.87 No 61 0.89 Yes 23 0.25 Yes -26 0.59 No 44 75.74 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 101320929 - NM_006828 ASCC3 1 0.48 1.29 44 11.45 90.92 26 6 Yes 13 1.34 Yes 0 0 No -25 0.47 No 45 63.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 101324302 - NM_006828 ASCC3 1 0.05 0.14 9 6.39 84.32 36 8.54 Yes 76 1.63 Yes 0 0 No -25 0.81 Yes 45 89.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14231472 - NM_018154 ASF1B 1 0.16 0.49 27 0.35 0 9 3.87 No 15 1.64 Yes 0 0 No -27 0.86 Yes 43 88.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14231770 - NM_018154 ASF1B 1 0.07 0.24 15 6.64 76.25 29 5.57 Yes 47 0.37 No 0 0 No -28 0.84 Yes 42 48.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 14232434 - NM_018154 ASF1B 1 0.05 0.14 10 3.5 76.9 51 7.44 Yes 24 1.02 Yes 0 0 No -24 0.72 Yes 46 84.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14232490 - NM_018154 ASF1B 1 0.11 0.36 20 4.7 82.27 28 5.46 No 43 0.48 No 27 0.49 Yes -27 0.52 No 43 64.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 14243020 - NM_018154 ASF1B 1 0.1 0.14 8 6.71 89.64 26 5.29 No 13 0.56 No 0 0 No -25 0.82 Yes 45 82.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155308197 - NM_018489 ASH1L 1 2.4 1.67 53 5.86 72.1 23 5.22 No 27 0.81 Yes 22 0.89 Yes -22 0.41 No 48 38.29 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 155317693 - NM_018489 ASH1L 1 0.72 0.46 29 1.35 75.08 27 6.55 Yes 73 0.39 No 0 0 No -26 0.67 Yes 41 47.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 155349903 - NM_018489 ASH1L 1 0.57 0.31 17 -1.3 0 25 5.38 No 54 1.02 Yes 0 0 No -24 0.69 Yes 46 87.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155364694 - NM_018489 ASH1L 1 0.34 0.14 9 12.08 89.29 31 8.3 Yes 18 1 Yes 0 0 No -30 0.64 No 40 81.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 155365971 - NM_018489 ASH1L 1 0.24 0.11 7 -3.8 67.97 63 8.36 Yes 65 1.84 Yes 0 0 No -23 0.43 No 47 15.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155368410 - NM_018489 ASH1L 1 0.23 0.11 7 0.83 0 20 4.43 No 57 0.07 No 0 0 No -20 0.4 No 20 38.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155373675 - NM_018489 ASH1L 1 0.51 0.21 12 7.94 86.21 38 7.48 Yes 25 0.1 No 0 0 No -32 0.42 No 38 53.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155374142 - NM_018489 ASH1L 1 1.83 0.88 38 6.43 83.64 32 7.95 Yes 19 0.06 No 0 0 No -31 0.4 No 38 47.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155378037 - NM_018489 ASH1L 1 0.81 0.39 23 8.19 90.44 27 5.27 No 34 -1.65 No 0 0 No -23 0.43 No 43 57.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155378194 - NM_018489 ASH1L 1 1.99 0.97 35 9.28 87.53 27 6.39 Yes 14 0.71 No 0 0 No -26 0.84 Yes 44 75.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155410385 - NM_018489 ASH1L 1 9.59 5.11 71 8.3 82.59 25 6.16 Yes -4 0.09 No 0 0 No -24 0.8 Yes 46 79.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155430952 - NM_018489 ASH1L 1 0.12 0.11 7 9.37 85.19 18 5.25 No 29 1.74 Yes 0 0 No -26 0.68 Yes 44 86.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155432391 - NM_018489 ASH1L 1 1.73 1.43 50 9.06 80.38 31 5.18 No 14 0.76 No 0 0 No -30 0.69 Yes 40 77.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155438236 - NM_018489 ASH1L 1 0.12 0.11 8 1.39 75.46 10 4.66 No 29 -2.18 No 0 0 No -41 0.55 No 51 59.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155452157 - NM_018489 ASH1L 1 0.32 0.33 21 10.42 91.76 27 4.5 No 14 0.44 No 0 0 No -26 0.87 Yes 44 77.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155482826 - NM_018489 ASH1L 1 0.81 0.82 38 4.92 79.09 25 5.2 No 76 0.95 Yes 0 0 No -24 0.64 No 46 67.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155489773 - NM_018489 ASH1L 1 1.94 1.97 57 10.07 89.56 27 6.73 Yes 59 1.38 Yes 0 0 No -30 0.43 No 44 61.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 37964517 + NM_001105214 ASH2L 1 0.24 0.33 22 -8.08 64.47 18 3.93 No 34 -3.35 No 28 0.88 Yes -21 0.69 Yes 49 55.75 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 37964532 + NM_001105214 ASH2L 1 0.21 0.29 15 -6.65 0 23 4.9 No 49 -4.29 No 28 0.88 Yes -22 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 37967386 + NM_001105214 ASH2L 1 0.9 1.39 57 8.18 87.19 28 5.17 No 55 0.14 No 0 0 No -25 0.91 Yes 45 74.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 37968498 + NM_001105214 ASH2L 1 0.45 0.4 24 8.73 84.59 28 6.06 Yes 66 1.64 Yes 0 0 No -31 0.62 No 46 71.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 37974136 + NM_001105214 ASH2L 1 0.1 0.11 7 2.38 67.65 15 5.14 No -2 0.86 Yes 37 0.48 Yes -24 0.43 No 56 37.48 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 37974969 + NM_001105214 ASH2L 1 1.71 1.97 57 10.83 97.18 33 9.43 Yes 35 -2.75 No 24 0.79 Yes -32 0.6 No 46 74.62 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 37978471 + NM_001105214 ASH2L 1 0.19 0.19 12 8.05 88.88 21 5.57 Yes 8 1.95 Yes 0 0 No -24 0.76 Yes 46 84.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 37978538 + NM_001105214 ASH2L 1 0.43 0.44 20 5.14 70.8 28 5.47 No 75 1.9 Yes 0 0 No -27 0.89 Yes 43 91.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 37985781 + NM_001105214 ASH2L 1 0.16 0.21 12 -1.49 0 14 3.5 No 33 1.62 Yes 0 0 No -45 0.72 Yes 25 58.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 65543642 + NM_001024943 ASL 1 0.37 0.22 14 5.85 83.29 33 5.51 No 20 0.59 No 0 0 No -27 0.9 Yes 43 82.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 65548886 + NM_001024943 ASL 1 0.33 0.18 11 7.16 86.25 30 5.88 Yes 61 1.19 Yes 0 0 No -22 0.63 No 42 31.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 65552746 + NM_001024943 ASL 1 0.16 0.14 7 3.78 77.73 27 6.3 Yes 45 0.32 No 0 0 No -26 0.93 Yes 44 87.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 65554237 + NM_001024943 ASL 1 0.2 0.22 13 -1.38 69.36 11 4.8 No 60 -4.4 No 27 0.82 Yes -37 0.5 No 33 38.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 12850163 + NM_004317 ASNA1 1 0.04 0.11 8 9.15 91.22 17 6.93 Yes 4 0.83 Yes 0 0 No -23 0.58 No 43 47.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 12856193 + NM_004317 ASNA1 1 0.45 1.33 44 -11.06 68.01 27 3.78 No 8 1.14 Yes 0 0 No -26 0.88 Yes 44 89.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12858214 + NM_004317 ASNA1 1 0.14 0.29 18 -3.83 0 15 3.87 No 18 1.81 Yes 0 0 No -30 0.97 Yes 40 95.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 97484067 - NM_001178076 ASNS 1 0.68 1.32 49 11.3 85.01 25 5.78 Yes 22 1.41 Yes 24 0.92 Yes -34 0.54 No 36 56.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 190530082 + NM_019048 ASNSD1 1 0.15 0.28 14 -1.41 62.61 16 5.05 No 21 0.51 No 20 0.26 Yes -27 0.33 No 28 40.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 190530105 + NM_019048 ASNSD1 1 0.15 0.26 15 -2.41 0 20 4.68 No 7 0.63 No 25 0.48 Yes -25 0.57 No 45 60.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 190530147 + NM_019048 ASNSD1 1 14.86 28.6 72 9.63 92.93 30 4.65 No 49 0.62 No 25 0.48 Yes -19 0.53 No 51 62.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 190531894 + NM_019048 ASNSD1 1 0.04 0.1 7 7.98 81.8 19 9.29 Yes 6 2.06 Yes 29 0.55 Yes -18 0.67 Yes 52 89.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 190531921 + NM_019048 ASNSD1 1 0.23 0.6 29 4.69 80.88 25 4.61 No 33 2.05 Yes 29 0.55 Yes -23 0.41 No 47 61.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 190532493 + NM_019048 ASNSD1 1 0.14 0.14 8 -2.43 0 38 6.31 Yes 25 0.93 Yes 0 0 No -27 0.28 No 33 56.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 62489227 - NM_001164750 ASPH 1 0.9 0.1 7 10.02 91.61 30 8.27 Yes 17 1.46 Yes 0 0 No -26 0.57 No 41 69.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 62559617 - NM_001164750 ASPH 1 3.51 0.93 42 3.58 68.62 37 6.14 Yes 24 0.73 No 0 0 No -36 0.83 Yes 34 91.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 62565071 - NM_001164750 ASPH 1 0.33 0.13 9 4.48 79.92 38 6.58 Yes 38 0.84 Yes 0 0 No -30 0.74 Yes 40 70.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 62574486 - NM_001164750 ASPH 1 4.28 1.61 53 11.44 91.54 28 5.31 No 52 1.27 Yes 27 0.71 Yes -27 0.7 Yes 43 70.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 62588879 - NM_001164750 ASPH 1 0.73 0.31 13 9.29 88.85 46 9.23 Yes 33 2.36 Yes 33 0.78 Yes -33 0.78 Yes 25 72.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 62595043 - NM_001164750 ASPH 1 31.39 7.68 71 5.56 76.78 30 5.83 Yes 17 0.85 Yes 29 0.8 Yes -29 0.6 No 41 76.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 197062390 - NM_018136 ASPM 1 0.18 0.17 11 -8.47 80.92 30 8.28 Yes 17 1.07 Yes 0 0 No -29 0.89 Yes 41 75.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 197066634 - NM_018136 ASPM 1 0.85 0.51 29 4.97 75.44 26 6.03 Yes 72 -5.48 No 0 0 No -25 0.64 No 45 78.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 197091139 - NM_018136 ASPM 1 0.27 0.17 10 4.04 84.45 30 4.68 No 58 1.05 Yes 0 0 No -26 0.53 No 44 59.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 197091139 - NM_018136 ASPM 1 0.29 0.21 9 4.04 84.45 30 4.68 No 58 1.05 Yes 0 0 No -26 0.53 No 44 59.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 197097471 - NM_018136 ASPM 1 0.35 0.44 18 10.68 100 22 5.29 No 58 0.37 No 0 0 No -21 0.76 Yes 49 61.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 197104363 - NM_018136 ASPM 1 0.15 0.13 8 -0.09 0 13 4.36 No 16 1.27 Yes 0 0 No -23 0.54 No 47 78.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 197111560 - NM_018136 ASPM 1 0.27 0.14 7 10.31 91.82 26 5.35 No 52 -2.71 No 0 0 No -25 0.78 Yes 45 71.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79939112 + NM_001251888 ASPSCR1 1 0.39 0.21 14 10.69 86.76 10 5.73 Yes 40 -2.09 No 0 0 No -28 0.66 No 42 49.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79940489 + NM_001251888 ASPSCR1 1 0.64 0.36 19 9.16 90.29 28 5.58 Yes 42 1.29 Yes 28 0.42 Yes -31 0.72 Yes 42 76.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79966893 + NM_001251888 ASPSCR1 1 0.48 0.18 11 1.21 68.39 15 5.39 No 2 1.42 Yes 21 0.71 Yes -14 0.42 No 56 57.56 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79952833 + NM_001251888 ASPSCR1 1 0.78 0.22 14 7.1 81.61 44 6.63 Yes 46 2.13 Yes 25 0.83 Yes -25 0.73 Yes 45 65.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 79967982 + NM_001251888 ASPSCR1 1 0.2 0.1 7 7.92 87 30 6.78 Yes 17 1.53 Yes 0 0 No -29 0.95 Yes 41 94.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79970031 + NM_001251888 ASPSCR1 1 1.9 1.18 42 6.92 84.7 22 4.47 No 2 0.89 Yes 21 0.77 Yes -21 0.86 Yes 49 73.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 130735894 - NM_001288950 ASTE1 1 11.27 1.49 50 12.03 91.42 25 5.46 No 46 0.27 No 24 0.84 Yes -24 0.79 Yes 46 73.3 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 119199871 - NM_014010 ASTN2 1 0.75 0.18 12 9.26 91.39 16 5.56 Yes 3 1.82 Yes 22 0.53 Yes -22 0.59 No 48 61.38 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 119204884 - NM_014010 ASTN2 1 0.4 0.14 10 6.88 82.39 29 6.27 Yes 16 1.52 Yes 0 0 No -38 0.53 No 32 59.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 119247642 - NM_014010 ASTN2 1 1.4 0.42 23 11.45 81.06 32 6 Yes 19 1.08 Yes 0 0 No -31 0.9 Yes 39 93.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 119331134 - NM_014010 ASTN2 1 1.29 0.42 19 11.35 95.43 22 5.29 No 9 1.33 Yes 0 0 No -21 0.81 Yes 49 86.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 119375885 - NM_014010 ASTN2 1 6.85 2.72 55 10.12 88.92 28 5.95 Yes 12 0.63 No 27 0.55 Yes -24 0.64 No 46 65.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 30948596 + NM_015338 ASXL1 1 0.16 0.13 8 1.83 65.43 47 6.33 Yes 74 0.62 No 0 0 No -31 0.58 No 39 67.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 30957070 + NM_015338 ASXL1 1 0.84 0.69 33 9.42 86.87 20 5.46 No 7 2.05 Yes 0 0 No -25 0.74 Yes 45 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30957552 + NM_015338 ASXL1 1 0.27 0.22 13 1.53 83.13 46 6.86 Yes 33 0.49 No 0 0 No -33 0.55 No 30 79.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 30957576 + NM_015338 ASXL1 1 0.18 0.17 10 2.71 84.79 27 3.93 No 2 1.51 Yes 0 0 No -26 0.7 Yes 44 47.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 30957626 + NM_015338 ASXL1 1 0.23 0.22 11 7.85 86.2 22 5.71 Yes 52 1.48 Yes 0 0 No -21 0.81 Yes 49 92.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30959580 + NM_015338 ASXL1 1 18.83 16.96 72 6.9 78.16 21 5.62 Yes 8 0.91 Yes 20 0.69 Yes -20 0.73 Yes 50 90.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 30959582 + NM_015338 ASXL1 1 0.43 0.4 19 -0.3 82.73 23 5.79 Yes 10 0.91 Yes 0 0 No -22 0.84 Yes 48 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30959966 + NM_015338 ASXL1 1 59.85 56.01 72 11.07 96.03 30 7.66 Yes 17 0.7 No 29 0.81 Yes -29 0.46 No 47 54.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 30978877 + NM_015338 ASXL1 1 1.82 1.57 57 8.24 87 22 5.74 Yes 9 1.2 Yes 0 0 No -26 0.69 Yes 44 82.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30989802 + NM_015338 ASXL1 1 0.8 0.76 35 4.88 87.22 50 5.5 No -2 0.84 Yes 0 0 No -38 0.53 No 32 42.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 30998117 + NM_015338 ASXL1 1 0.18 0.17 10 6.79 78.76 32 7.37 Yes 16 0.47 No 0 0 No -28 0.32 No 43 37.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 31015885 + NM_015338 ASXL1 1 0.14 0.15 8 4.47 77.01 17 5.48 No 4 1.34 Yes 0 0 No -23 0.73 Yes 47 67.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 31015933 + NM_015338 ASXL1 1 1.02 0.99 41 -0.32 71.63 30 4.67 No 52 1.33 Yes 0 0 No -29 0.89 Yes 41 92.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 31016485 + NM_015338 ASXL1 1 0.12 0.13 9 4.74 84.41 44 6.68 Yes 35 1.69 Yes 0 0 No -34 0.95 Yes 36 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25991756 - NM_018263 ASXL2 1 0.5 0.22 15 7.21 84.37 21 6.77 Yes 8 1.01 Yes 22 0.92 Yes -20 0.56 No 42 48.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 26009834 - NM_018263 ASXL2 1 1.17 0.43 24 5.39 81.33 46 9.73 Yes 33 1.26 Yes 0 0 No -45 0.51 No 30 60.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 26027910 - NM_018263 ASXL2 1 0.46 0.21 10 9.2 88.94 36 6.91 Yes 23 1.94 Yes 0 0 No -35 0.87 Yes 35 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 26079835 - NM_018263 ASXL2 1 0.54 0.22 12 4.94 72.21 42 5.42 No 11 0.4 No 0 0 No -26 0.46 No 44 66.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 26092780 - NM_018263 ASXL2 1 0.27 0.1 7 10.87 85.86 44 7.07 Yes 31 1.93 Yes 0 0 No -27 0.56 No 34 62.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89519545 - NM_032810 ATAD1 1 1.23 2.92 69 7.14 86.1 16 4.69 No 25 0.65 No 28 0.64 Yes -20 0.68 Yes 50 74.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 89519558 - NM_032810 ATAD1 1 0.28 0.64 29 -8.67 0 16 4.36 No 12 0.64 No 28 0.64 Yes -45 0.48 No 25 43.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 89519571 - NM_032810 ATAD1 1 0.08 0.19 11 3.9 79.95 39 6.59 Yes -1 0.62 No 28 0.64 Yes -32 0.58 No 38 59.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 89525768 - NM_032810 ATAD1 1 0.07 0.17 9 4.48 76.55 25 6.33 Yes 12 0.94 Yes 0 0 No -24 0.9 Yes 46 86.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89526163 - NM_032810 ATAD1 1 1.45 3.56 67 6.31 78.54 36 7.14 Yes 23 0.54 No 0 0 No -35 0.94 Yes 35 94.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89529223 - NM_032810 ATAD1 1 0.51 1.11 40 2.61 84.69 13 5.57 Yes 0 1.03 Yes 0 0 No -22 0.88 Yes 48 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89536207 - NM_032810 ATAD1 1 0.08 0.19 11 6.59 82.75 21 4.43 No 4 0.71 No 24 0.82 Yes -23 0.37 No 47 44.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 89538489 - NM_032810 ATAD1 1 0.34 0.85 40 11.26 89.66 39 6.01 Yes 35 0.11 No 0 0 No -26 0.46 No 44 67.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89543126 - NM_032810 ATAD1 1 0.05 0.14 10 7.22 84.42 25 6 Yes 76 -1.22 No 0 0 No -24 0.52 No 41 56.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89548887 - NM_032810 ATAD1 1 1.8 4.4 72 7.99 84.26 28 5.85 Yes 76 0.68 No 0 0 No -28 0.52 No 49 72.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89557066 - NM_032810 ATAD1 1 0.06 0.14 9 13.46 89.12 48 7.27 Yes 61 -2.82 No 0 0 No -42 0.54 No 23 53.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89577072 - NM_032810 ATAD1 1 0.97 0.29 16 6.3 86.72 28 5.92 Yes 0 1.26 Yes 0 0 No -27 0.92 Yes 43 88.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 124340815 - NM_014109 ATAD2 1 0.83 1.46 51 -2.1 0 43 7 Yes 30 0.76 No 0 0 No -31 0.76 Yes 39 77.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 124347614 - NM_014109 ATAD2 1 0.11 0.15 10 8.89 87.45 20 4.63 No 34 0.86 Yes 0 0 No -19 0.52 No 51 84.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 124361662 - NM_014109 ATAD2 1 1.54 1.99 58 5.95 73.69 32 5.56 Yes 40 1.21 Yes 25 0.62 Yes -25 0.38 No 39 31.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 124367273 - NM_014109 ATAD2 1 0.14 0.18 11 7.13 84.45 25 5.73 Yes 31 1.24 Yes 0 0 No -24 0.76 Yes 46 79.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 124382253 - NM_014109 ATAD2 1 0.87 1.18 42 -7.69 0 20 4.36 No 47 1.16 Yes 0 0 No -19 0.74 Yes 51 65.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 124382263 - NM_014109 ATAD2 1 0.14 0.21 13 -10.58 72.19 21 5.2 No 37 1.17 Yes 19 0.57 Yes -20 0.51 No 45 46.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 23977606 - NR_125717 ATAD2B 1 2.39 0.79 35 4.97 69.61 31 3.88 No 68 0.97 Yes 0 0 No -25 0.34 No 45 42.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24000859 - NR_125717 ATAD2B 1 0.2 0.11 7 10.17 91.62 20 4.9 No 7 0.44 No 0 0 No -19 0.94 Yes 51 97.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24018936 - NR_125717 ATAD2B 1 0.29 0.14 10 8.02 82.31 35 6.92 Yes 22 1.26 Yes 0 0 No -34 0.51 No 36 74.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 24022864 - NR_125717 ATAD2B 1 0.36 0.18 12 2.57 70.81 34 8.76 Yes 67 0.79 Yes 33 0.64 Yes -33 0.94 Yes 37 93.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24024368 - NR_125717 ATAD2B 1 11.61 5.58 72 9.41 89.79 36 6.78 Yes 23 0.84 Yes 0 0 No -26 0.6 No 44 61.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24029099 - NR_125717 ATAD2B 1 0.93 0.44 23 9 84.13 30 7 Yes 17 0.1 No 29 0.3 Yes -28 0.33 No 48 37.54 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 24032047 - NR_125717 ATAD2B 1 0.68 0.36 21 8 87.82 33 6.51 Yes 4 1.19 Yes 28 0.85 Yes -32 0.57 No 42 82.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 24050731 - NR_125717 ATAD2B 1 26.61 12.69 72 10.92 90.72 37 4.01 No 70 0.79 Yes 26 0.87 Yes -26 0.89 Yes 44 96.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24056854 - NR_125717 ATAD2B 1 0.26 0.13 8 3.44 76.71 20 3.97 No 30 0.2 No 0 0 No -20 0.89 Yes 50 44.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 24058804 - NR_125717 ATAD2B 1 0.48 0.22 14 3.94 84.41 19 5 No 6 1.15 Yes 0 0 No -22 0.78 Yes 48 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24078592 - NR_125717 ATAD2B 1 0.48 0.26 18 6.43 81.39 20 6.56 Yes 7 1.15 Yes 0 0 No -19 0.7 Yes 51 85.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24079313 - NR_125717 ATAD2B 1 0.27 0.14 8 9.15 81 31 5.66 Yes 18 1.19 Yes 30 0.92 Yes -30 0.87 Yes 40 93.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24079912 - NR_125717 ATAD2B 1 0.54 0.29 15 9.66 80.49 28 7.2 Yes 15 0.71 No 0 0 No -27 0.66 No 43 63.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24088844 - NR_125717 ATAD2B 1 0.58 0.31 13 0.78 60.22 28 6.14 Yes 68 0.99 Yes 0 0 No -27 0.7 Yes 43 77.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24088873 - NR_125717 ATAD2B 1 1.1 0.54 28 7.33 82.55 30 5.72 Yes 39 1.01 Yes 0 0 No -29 0.65 No 41 66.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24089273 - NR_125717 ATAD2B 1 0.2 0.11 7 4.48 83.86 31 6.56 Yes 18 1.37 Yes 0 0 No -30 0.71 Yes 40 87.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24096050 - NR_125717 ATAD2B 1 0.22 0.14 9 8.11 82.84 73 8.21 Yes 7 0.1 No 0 0 No -22 0.58 No 42 46.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24102311 - NR_125717 ATAD2B 1 0.19 0.15 10 6.6 87.11 18 5.38 No 5 0.89 Yes 0 0 No -22 0.6 No 53 62.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24106506 - NR_125717 ATAD2B 1 1.59 1.22 51 5.55 87.33 24 4.93 No 28 0.98 Yes 27 0.84 Yes -23 0.67 Yes 47 70.68 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24107761 - NR_125717 ATAD2B 1 0.17 0.11 7 6.15 83.99 24 5.87 Yes 64 0.37 No 21 0.93 Yes -23 0.62 No 47 43.4 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 24128387 - NR_125717 ATAD2B 1 0.35 0.15 11 10.21 92.91 44 6.54 Yes 61 0.54 No 0 0 No -31 0.69 Yes 39 84.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1459223 + NM_001170536 ATAD3A 1 0.11 0.17 10 -3.78 0 27 6.75 Yes 45 -0.1 No 0 0 No -41 0.51 No 29 68.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1462540 + NM_001170536 ATAD3A 1 0.17 0.21 11 4.43 78.1 36 6 Yes 66 1.64 Yes 29 0.69 Yes -35 0.84 Yes 35 96.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1463359 + NM_001170536 ATAD3A 1 0.11 0.15 9 2.3 84.41 29 7.47 Yes 16 1.43 Yes 0 0 No -28 0.69 Yes 42 89.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1421494 + NM_001317238 ATAD3B 1 0.21 0.21 12 -3.78 0 27 6.61 Yes 49 -0.39 No 0 0 No -31 0.51 No 29 34.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1422574 + NM_001317238 ATAD3B 1 1.14 0.51 24 7.71 80 44 8.75 Yes 2 1.49 Yes 0 0 No -43 0.89 Yes 27 94.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1425071 + NM_001317238 ATAD3B 1 0.62 0.53 25 4.43 78.1 36 5.95 Yes 67 1.43 Yes 29 0.69 Yes -35 0.64 No 35 85.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 1425693 + NM_001317238 ATAD3B 1 0.47 0.47 20 5.37 75.07 26 5.38 No 41 -2.7 No 0 0 No -25 0.8 Yes 45 73.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29163604 + NM_024857 ATAD5 1 3.32 2.11 58 0.47 83.78 59 6.94 Yes 42 0.5 No 0 0 No -28 0.49 No 42 53.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 29171886 + NM_024857 ATAD5 1 0.41 0.25 13 6.13 92.11 27 5.57 Yes 45 1.86 Yes 0 0 No -26 0.33 No 46 30.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29183491 + NM_024857 ATAD5 1 3.5 1.01 41 7.72 88.3 37 6.18 Yes 35 2.09 Yes 0 0 No -37 0.85 Yes 33 82.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29187447 + NM_024857 ATAD5 1 9 4.78 72 2.42 76.3 36 5.65 Yes 16 0.2 No 31 0.65 Yes -28 0.49 No 45 68.52 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 29187777 + NM_024857 ATAD5 1 0.19 0.11 8 2.54 83.57 29 5.47 No 54 0.34 No 0 0 No -28 0.7 Yes 42 91.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29187802 + NM_024857 ATAD5 1 2.09 1.33 57 7.32 90.14 28 5.29 No 41 0.2 No 0 0 No -27 0.31 No 17 72.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 29188570 + NM_024857 ATAD5 1 0.37 0.24 13 2.23 0 45 8.31 Yes 73 0.94 Yes 0 0 No -39 0.73 Yes 31 78.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29191959 + NM_024857 ATAD5 1 0.81 0.42 21 3.75 84.41 30 6.47 Yes 17 1.17 Yes 0 0 No -29 0.84 Yes 41 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29195899 + NM_024857 ATAD5 1 0.37 0.24 16 6.69 84 42 9.81 Yes 47 1.13 Yes 0 0 No -41 0.61 No 36 55.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29197596 + NM_024857 ATAD5 1 0.2 0.11 7 6.76 77.53 35 5.35 No 11 0.74 No 0 0 No -31 0.68 Yes 39 47.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 29204456 + NM_024857 ATAD5 1 4.57 2.42 58 5.82 84.61 19 5.32 No 46 0.28 No 0 0 No -29 0.93 Yes 41 94.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29218888 + NM_024857 ATAD5 1 0.17 0.11 8 4.07 74.19 20 7.08 Yes 7 1.12 Yes 0 0 No -19 0.64 No 51 80.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 123523995 - NM_001001976 ATE1 1 0.59 0.51 24 12.79 100 40 6.18 Yes 15 1.22 Yes 0 0 No -27 0.79 Yes 43 92.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123542215 - NM_001001976 ATE1 1 0.52 0.44 26 6.69 86.49 27 7.73 Yes 14 1.84 Yes 26 0.85 Yes -26 0.76 Yes 44 87.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 123594100 - NM_001001976 ATE1 1 0.47 0.42 17 10.83 84.69 32 6.63 Yes 47 2.06 Yes 0 0 No -31 0.87 Yes 39 80.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123594997 - NM_001001976 ATE1 1 0.32 0.25 14 7.98 77.27 23 6.87 Yes 10 0.89 Yes 0 0 No -26 0.49 No 44 42.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 123600775 - NM_001001976 ATE1 1 0.16 0.15 10 2.96 0 63 6.77 Yes 34 -2.04 No 0 0 No -39 0.71 Yes 31 70.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 123610928 - NM_001001976 ATE1 1 0.44 0.36 19 8.56 87.31 38 7.15 Yes 64 1.51 Yes 0 0 No -37 0.71 Yes 33 50.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 123617122 - NM_001001976 ATE1 1 0.11 0.11 7 10.13 90.28 25 4.17 No 75 0.86 Yes 0 0 No -24 0.9 Yes 46 92.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123658485 - NM_001001976 ATE1 1 19.9 4.49 67 7.73 82.93 35 6 Yes 64 0.4 No 34 0.77 Yes -34 0.71 Yes 36 74.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 123658485 - NM_001001976 ATE1 1 237.69 52.58 72 7.73 82.93 35 6 Yes 64 0.4 No 34 0.77 Yes -34 0.71 Yes 36 74.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 123680508 - NM_001001976 ATE1 1 1.81 1.35 52 7.63 85.05 32 5.57 Yes 25 0.88 Yes 0 0 No -31 0.79 Yes 39 80.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123686043 - NM_001001976 ATE1 1 1.83 0.89 36 2.38 73.18 35 7.34 Yes 22 1.39 Yes 0 0 No -34 0.89 Yes 36 97.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 51181990 + NM_005171 ATF1 1 0.26 0.26 17 9.77 89.39 31 4.53 No 26 0.89 Yes 30 0.6 Yes -28 0.6 No 42 75.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 51189680 + NM_005171 ATF1 1 1.95 1.83 59 3.74 72.4 53 7.16 Yes 46 0.26 No 18 0.64 Yes -45 0.65 No 25 86.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 51207769 + NM_005171 ATF1 1 0.18 0.22 12 2.43 65.74 30 5.51 No 65 0.74 No 30 0.87 Yes -29 0.59 No 45 49.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 51213419 + NM_005171 ATF1 1 0.26 0.17 11 -2.86 72.32 31 6.89 Yes 18 1.6 Yes 0 0 No -30 0.91 Yes 40 94.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 175979486 - NR_045769 ATF2 1 0.18 0.42 26 -0.69 75.21 21 4.64 No 8 0.42 No 0 0 No -20 0.93 Yes 50 90.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 175982846 - NR_045769 ATF2 1 0.15 0.39 23 -15.23 0 29 6.55 Yes 16 1.46 Yes 0 0 No -31 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 175983093 - NR_045769 ATF2 1 0.39 0.5 28 0.3 0 19 6.69 Yes 71 1.21 Yes 0 0 No -32 0.55 No 38 56.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 175983093 - NR_045769 ATF2 1 0.39 0.49 20 0.3 0 19 6.69 Yes 71 1.21 Yes 0 0 No -32 0.55 No 38 56.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 175991960 - NR_045769 ATF2 1 1.36 1.83 57 4.72 0 29 6.52 Yes 16 1.39 Yes 28 0.74 Yes -29 0.61 No 36 79.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 175991964 - NR_045769 ATF2 1 0.11 0.15 10 2.32 83.92 25 6.24 Yes 12 1.42 Yes 28 0.74 Yes -25 0.59 No 40 80.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 39917376 + NM_182810 ATF4 1 0.21 1.46 53 0.25 73.12 25 5.16 No 18 1.33 Yes 0 0 No -24 0.66 No 46 94.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 39917379 + NM_182810 ATF4 1 0.18 1.29 48 -0.94 67.67 28 5.44 No 21 1.33 Yes 0 0 No -27 0.85 Yes 43 90.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39917436 + NM_182810 ATF4 1 0.05 0.42 21 5.25 85.1 21 5.07 No 8 0.17 No 0 0 No -20 0.58 No 50 67.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 161748459 + NM_007348 ATF6 1 1.12 1.76 55 9.22 91.07 27 6.38 Yes 14 2.5 Yes 0 0 No -26 0.88 Yes 44 94.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161757937 + NM_007348 ATF6 1 0.09 0.22 13 9.34 96.14 27 5.48 No 14 0.44 No 0 0 No -26 0.91 Yes 44 85.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 161761200 + NM_007348 ATF6 1 0.07 0.15 9 -8.89 72.1 28 5.82 Yes 15 0.83 Yes 0 0 No -31 0.94 Yes 39 95.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161772401 + NM_007348 ATF6 1 0.1 0.22 13 8.16 84.89 20 4.72 No -1 1.37 Yes 0 0 No -28 0.58 No 42 64.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 161821454 + NM_007348 ATF6 1 1.1 2.25 59 4.79 83.82 19 5.25 No 6 1.2 Yes 0 0 No -24 0.74 Yes 46 82.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161832990 + NM_007348 ATF6 1 0.08 0.13 9 7.02 93.22 29 6.16 Yes 16 1.23 Yes 0 0 No -28 0.43 No 42 61.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 161832990 + NM_007348 ATF6 1 4.31 7.46 72 7.02 93.22 29 6.16 Yes 16 1.23 Yes 0 0 No -28 0.43 No 42 61.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 161834530 + NM_007348 ATF6 1 0.58 1.1 46 8.19 91.77 21 5.83 Yes 28 1.31 Yes 0 0 No -20 0.67 Yes 50 63.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 161836150 + NM_007348 ATF6 1 0.7 1.39 48 10.12 87.85 68 5.49 No 25 1.96 Yes 0 0 No -28 0.59 No 33 88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 161840761 + NM_007348 ATF6 1 0.11 0.22 11 11.02 92.25 16 4.47 No 3 0.8 Yes 0 0 No -30 0.88 Yes 40 83.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161857051 + NM_007348 ATF6 1 2.25 4.61 69 8.28 85.86 25 7.48 Yes 12 1.44 Yes 0 0 No -24 0.92 Yes 46 95.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161857054 + NM_007348 ATF6 1 0.14 0.29 18 5.03 87 28 7.68 Yes 15 1.42 Yes 0 0 No -27 0.93 Yes 43 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161905900 + NM_007348 ATF6 1 0.08 0.13 9 10.8 78.47 22 6.08 Yes 28 0.57 No 0 0 No -21 0.69 Yes 49 76.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 161906167 + NM_007348 ATF6 1 0.14 0.21 12 8.72 87.68 17 6.69 Yes 4 0.7 No 0 0 No -28 0.95 Yes 42 91.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 161912008 + NM_007348 ATF6 1 0.12 0.18 10 4.42 84.46 27 5.1 No 14 1.6 Yes 0 0 No -26 0.57 No 44 72.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 53956392 - NR_073163 ATF7 1 0.35 0.21 14 9.45 91.39 23 5.09 No 70 0.04 No 0 0 No -27 0.59 No 43 48.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 53993704 - NR_073163 ATF7 1 0.23 0.18 12 8.11 80.09 58 8.04 Yes 2 1.34 Yes 0 0 No -30 0.76 Yes 40 81.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 14548063 + NM_181352 ATF7IP 1 0.56 0.28 17 -3.22 52.1 48 7.57 Yes 70 0.42 No 0 0 No -38 0.58 No 23 66.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 14579484 + NM_181352 ATF7IP 1 0.09 0.13 7 9.45 98.16 31 6.89 Yes 18 0.01 No 0 0 No -34 0.85 Yes 36 83.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 14587273 + NM_181352 ATF7IP 1 29.12 41.38 72 2.92 81.73 32 6.16 Yes 19 0.2 No 28 0.58 Yes -31 0.43 No 39 60.14 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 14589296 + NM_181352 ATF7IP 1 0.12 0.13 7 5.11 72.89 43 7.6 Yes 30 1.64 Yes 0 0 No -21 0.71 Yes 49 57.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 14634541 + NM_181352 ATF7IP 1 0.1 0.14 9 10.18 88.51 27 6.94 Yes 14 1.6 Yes 26 0.94 Yes -26 0.85 Yes 44 93.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 14635280 + NM_181352 ATF7IP 1 0.17 0.19 14 3.19 66.16 25 4.57 No 39 -3.65 No 0 0 No -24 0.61 No 46 68.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 14650569 + NM_181352 ATF7IP 1 0.2 0.24 13 2.57 73.99 33 5.92 Yes 28 0.9 Yes 23 0.91 Yes -32 0.77 Yes 38 79.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 10523228 + NR_045816 ATF7IP2 1 7.3 2.43 62 6.63 78.77 27 5.74 Yes 73 -2.66 No 0 0 No -29 0.5 No 44 57.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 10523232 + NR_045816 ATF7IP2 1 1.61 0.58 27 0.72 0 31 6.08 Yes 34 -1.74 No 0 0 No -33 0.5 No 40 60.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 10523252 + NR_045816 ATF7IP2 1 3.23 1.1 45 5.18 86.84 27 5.02 No 54 -1.73 No 0 0 No -26 0.64 No 44 72.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 10527370 + NR_045816 ATF7IP2 1 0.46 0.28 15 1.68 0 44 7.91 Yes 31 1.64 Yes 19 0.66 Yes -26 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 10530590 + NR_045816 ATF7IP2 1 0.33 0.13 7 7.15 79.82 34 5.58 Yes 59 -4.51 No 0 0 No -25 0.5 No 45 42.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 10532294 + NR_045816 ATF7IP2 1 8.77 3.5 68 9.03 88.27 28 7.68 Yes 15 1.27 Yes 0 0 No -27 0.89 Yes 43 95.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 10575514 + NR_045816 ATF7IP2 1 0.72 0.19 13 4.07 87.79 28 8.21 Yes 36 -3.65 No 0 0 No -27 0.84 Yes 43 91.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 81305529 + NM_031482 ATG10 1 5.97 1.11 47 10.09 84.52 40 7.06 Yes 27 1.17 Yes 0 0 No -24 0.94 Yes 46 93.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 81307033 + NM_031482 ATG10 1 0.59 0.13 7 9.5 87.82 19 8.08 Yes 42 1.25 Yes 0 0 No -31 0.63 No 39 71.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 81315239 + NM_031482 ATG10 1 8.55 1.44 55 10.14 91.96 27 5.74 Yes 14 0.48 No 0 0 No -26 0.91 Yes 44 92.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 81425430 + NM_031482 ATG10 1 1.58 0.19 11 7.61 90.52 24 4.9 No 45 1.63 Yes 0 0 No -23 0.83 Yes 47 75.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 81443008 + NM_031482 ATG10 1 7.11 0.86 35 11.82 88.57 28 7.32 Yes 15 1.65 Yes 27 0.78 Yes -27 0.52 No 43 62.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 81461296 + NM_031482 ATG10 1 4.12 0.35 20 7.73 86.48 43 5.19 No 7 0.63 No 0 0 No -27 0.56 No 43 65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 115169296 - NR_073603 ATG12 1 0.07 0.11 7 11.25 88.96 39 5.74 Yes 7 0.69 No 19 0.7 Yes -32 0.61 No 38 61.69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 46652446 + NM_001346319 ATG13 1 0.21 0.13 8 7.39 86.87 30 7.8 Yes 17 1.48 Yes 29 0.88 Yes -29 0.93 Yes 41 94.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46653872 + NM_001346319 ATG13 1 0.25 0.17 10 7.11 77.42 19 5.34 No 41 0.06 No 24 0.67 Yes -26 0.52 No 44 54.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 46690385 + NM_001346319 ATG13 1 1.3 1.74 57 6.79 90.95 15 5.2 No 52 1.69 Yes 0 0 No -18 0.45 No 50 57.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 55861434 - NM_014924 ATG14 1 2.03 0.31 17 7.15 78.95 30 7.15 Yes 27 0.55 No 0 0 No -29 0.6 No 41 64.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 234172641 + NM_001190266 ATG16L1 1 0.76 0.39 22 1.67 0 32 4.3 No 31 0.84 Yes 0 0 No -31 0.95 Yes 39 97.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234173377 + NM_001190266 ATG16L1 1 0.33 0.13 8 4.58 75.58 22 4.94 No 33 0.49 No 0 0 No -21 0.85 Yes 49 88.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 234173658 + NM_001190266 ATG16L1 1 2.18 0.79 39 6.64 79.15 25 5.02 No 47 -2.67 No 0 0 No -24 0.87 Yes 46 72.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 234200778 + NM_001190266 ATG16L1 1 0.37 0.13 8 2.41 0 26 5.66 Yes 13 0.6 No 20 0.71 Yes -25 0.86 Yes 45 83.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 72527207 + NM_033388 ATG16L2 1 1.01 0.26 15 6.67 83.82 19 7.07 Yes 6 1.26 Yes 0 0 No -18 0.63 No 52 87.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 72527210 + NM_033388 ATG16L2 1 1.57 0.46 22 5.01 80.64 22 7.28 Yes 9 1.23 Yes 0 0 No -21 0.88 Yes 49 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72531181 + NM_033388 ATG16L2 1 6.66 0.51 30 5.01 63.38 26 7.18 Yes 13 1.25 Yes 25 0.85 Yes -25 0.69 Yes 45 39.92 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 72532243 + NM_033388 ATG16L2 1 8.91 0.82 33 4.79 75.41 32 5.69 Yes 20 0.25 No 32 0.8 Yes -32 0.91 Yes 38 92.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 72532592 + NM_033388 ATG16L2 1 22.79 1.67 61 2.76 68.65 19 5.45 No 70 0.93 Yes 27 0.62 Yes -27 0.43 No 43 39.33 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 72533532 + NM_033388 ATG16L2 1 1.78 0.32 19 -6.96 0 16 4.34 No 20 0.11 No 0 0 No -32 0.91 Yes 38 80.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 72534588 + NM_033388 ATG16L2 1 8.64 1.15 43 2.88 79.25 15 5.2 No 2 2.03 Yes 20 0.42 Yes -20 0.47 No 50 59.55 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 72534601 + NM_033388 ATG16L2 1 1.76 0.25 14 11.55 96.5 16 4.69 No 15 2.16 Yes 0 0 No -27 0.69 Yes 43 95.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72534810 + NM_033388 ATG16L2 1 1.56 0.25 15 10.92 85.04 21 5.2 No 8 0.74 No 20 0.78 Yes -20 0.88 Yes 50 92.79 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 72535391 + NM_033388 ATG16L2 1 0.28 0.14 8 4.77 81.35 24 5.2 No 52 0.95 Yes 0 0 No -23 0.96 Yes 47 96.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72536393 + NM_033388 ATG16L2 1 5.19 2.29 58 5.05 80.21 32 5.77 Yes 19 0.36 No 26 0.78 Yes -31 0.73 Yes 39 63.42 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 72540208 + NM_033388 ATG16L2 1 0.33 0.17 10 9.01 83.14 44 6.85 Yes 31 -0.01 No 0 0 No -27 0.68 Yes 43 72.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 64669601 - NM_015104 ATG2A 1 0.8 0.14 8 9.09 87.87 34 6.28 Yes 21 0.86 Yes 0 0 No -33 0.82 Yes 37 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64671149 - NM_015104 ATG2A 1 1.08 0.24 14 3.49 75.24 17 5.09 No NA NA NA 18 0.7 Yes -23 0.9 Yes 47 89.84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64676618 - NM_015104 ATG2A 1 1.51 0.4 21 -1.84 0 26 5.48 No 13 1.04 Yes 0 0 No -25 0.84 Yes 45 79.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64679380 - NM_015104 ATG2A 1 1.17 0.18 11 8.06 76.2 22 5.29 No 9 1.33 Yes 0 0 No -21 0.83 Yes 49 88.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64680851 - NM_015104 ATG2A 1 0.49 0.14 8 -5.98 0 10 4.99 No 27 2.12 Yes 0 0 No -39 0.78 Yes 31 29.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 96755043 - NM_018036 ATG2B 1 1.14 0.46 25 11.2 81.34 21 5.03 No 50 0.92 Yes 0 0 No -25 0.55 No 45 72.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 96756892 - NM_018036 ATG2B 1 0.36 0.15 10 6.81 71.71 26 5.57 Yes 51 1.35 Yes 0 0 No -25 0.9 Yes 45 68.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 96761877 - NM_018036 ATG2B 1 0.45 0.15 10 7.4 85.93 29 5.45 No 51 0.81 Yes 0 0 No -28 0.68 Yes 42 88.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 96770938 - NM_018036 ATG2B 1 1.23 0.79 37 2.85 77.81 39 6.32 Yes 48 1.42 Yes 0 0 No -38 0.78 Yes 32 87.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 96772006 - NM_018036 ATG2B 1 0.45 0.18 11 0.21 69.1 38 7.28 Yes 25 1.2 Yes 0 0 No -37 0.91 Yes 33 81.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 96775928 - NM_018036 ATG2B 1 1.26 0.6 30 -1.32 0 25 5.28 No 35 -2.06 No 0 0 No -24 0.77 Yes 46 58.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 96779547 - NM_018036 ATG2B 1 0.46 0.24 11 6.69 80.36 32 5.39 No 19 0.11 No 0 0 No -31 0.53 No 39 55.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 96779799 - NM_018036 ATG2B 1 0.61 0.26 15 6.68 87.87 39 5.21 No 64 0.34 No 32 0.54 Yes -28 0.64 No 42 73.39 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 96779802 - NM_018036 ATG2B 1 0.57 0.28 15 7.74 82.1 36 5.03 No 61 0.34 No 32 0.54 Yes -25 0.64 No 45 73.1 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 96783017 - NM_018036 ATG2B 1 0.48 0.13 8 -2.01 0 35 5.93 Yes 22 1.45 Yes 0 0 No -35 0.39 No 36 50.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 96784636 - NM_018036 ATG2B 1 0.43 0.14 10 6.32 78.27 27 5.64 Yes 11 0.68 No 26 0.49 Yes -26 0.48 No 44 63.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 96798861 - NM_018036 ATG2B 1 0.28 0.1 7 2.32 74.8 29 5.65 Yes 27 0.22 No 0 0 No -28 0.92 Yes 42 66.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 96798864 - NM_018036 ATG2B 1 1.38 0.5 29 0.9 67.75 26 5.38 No 75 0.98 Yes 0 0 No -25 0.93 Yes 45 67.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 96798990 - NM_018036 ATG2B 1 11.36 4.13 71 -0.57 76.77 25 5.19 No 12 0.64 No 0 0 No -24 0.63 No 46 72.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 96803367 - NM_018036 ATG2B 1 0.34 0.11 7 5.63 76.7 15 6.18 Yes -3 0.26 No 0 0 No -29 0.7 Yes 41 57.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 96809543 - NM_018036 ATG2B 1 0.79 0.53 29 2.81 76.26 33 6.84 Yes 20 0.37 No 0 0 No -32 0.59 No 38 82.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 112251742 - NM_022488 ATG3 1 0.05 0.13 8 -0.18 0 17 4.58 No 13 0.09 No 0 0 No -17 0.57 No 54 42.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 112267758 - NM_022488 ATG3 1 0.06 0.14 7 8.27 87.47 25 5.1 No 12 1.43 Yes 0 0 No -24 0.91 Yes 46 94.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 112269102 - NM_022488 ATG3 1 0.09 0.17 10 -1.91 0 12 4.09 No 9 0.68 No 0 0 No -49 0.5 No 21 55.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 112272176 - NM_022488 ATG3 1 0.07 0.13 8 -16.82 0 55 7.55 Yes 42 1.67 Yes 0 0 No -47 0.5 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242578328 + NM_178326 ATG4B 1 0.56 0.65 29 9.16 89.53 27 7.42 Yes 71 1.62 Yes 0 0 No -24 0.59 No 46 50.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242590683 + NM_178326 ATG4B 1 0.08 0.13 7 -3.12 0 51 5.62 Yes 50 0.31 No 0 0 No -50 0.93 Yes 20 94.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242591298 + NM_178326 ATG4B 1 1.38 1.54 52 2.02 71.74 26 4.24 No 28 0.74 No 25 0.91 Yes -25 0.48 No 45 69.19 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242591691 + NM_178326 ATG4B 1 0.23 0.28 18 7.78 84.59 28 5.2 No 52 0.88 Yes 0 0 No -27 0.87 Yes 43 96.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242592721 + NM_178326 ATG4B 1 10.42 12.07 72 4.2 79.47 30 7.7 Yes 17 1.93 Yes 29 0.91 Yes -29 0.85 Yes 41 93.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 242592724 + NM_178326 ATG4B 1 0.11 0.14 10 -8.63 72.28 33 7.89 Yes 20 1.94 Yes 0 0 No -32 0.78 Yes 38 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242606063 + NM_178326 ATG4B 1 0.6 0.79 41 2.84 0 26 5.47 No 67 0.32 No 0 0 No -25 0.74 Yes 41 64.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 242609108 + NM_178326 ATG4B 1 0.18 0.15 9 7 80.12 21 7.21 Yes 8 1.19 Yes 0 0 No -20 0.87 Yes 50 89.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242610155 + NM_178326 ATG4B 1 0.12 0.1 7 0.05 77.12 18 4.9 No 21 1.41 Yes 0 0 No -33 0.86 Yes 37 96.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242610742 + NM_178326 ATG4B 1 0.27 0.31 18 0.43 82.01 21 4.98 No 8 1.69 Yes 0 0 No -24 0.56 No 50 77.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 63250756 + NM_032852 ATG4C 1 0.93 0.11 7 4.4 70.76 28 6.97 Yes 52 1.41 Yes 0 0 No -27 0.95 Yes 43 94.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 63269393 + NM_032852 ATG4C 1 0.6 0.14 10 -0.96 0 28 5.23 No 15 1.34 Yes 0 0 No -27 0.31 No 43 47.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 63269448 + NM_032852 ATG4C 1 2.21 0.42 23 6.62 82.15 17 5.17 No 70 1.29 Yes 25 0.61 Yes -25 0.77 Yes 45 56.21 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 63274645 + NM_032852 ATG4C 1 0.54 0.28 15 6.41 84.95 27 5.39 No 14 0.66 No 0 0 No -26 0.87 Yes 44 87.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63286814 + NM_032852 ATG4C 1 0.22 0.22 13 -2.15 0 25 5.91 Yes 12 0.8 Yes 26 0.47 Yes -24 0.52 No 46 61.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 63294791 + NM_032852 ATG4C 1 2.27 1.38 49 4.92 79.54 22 4.9 No 57 0.41 No 0 0 No -21 0.65 No 49 64.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 63297030 + NM_032852 ATG4C 1 0.36 0.29 17 3.03 72.12 30 5.53 No 28 0.7 No 0 0 No -29 0.54 No 41 56.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 63301056 + NM_032852 ATG4C 1 0.14 0.17 11 11.43 95.55 24 6.68 Yes 11 1.65 Yes 24 0.93 Yes -24 0.71 Yes 46 75.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 63303091 + NM_032852 ATG4C 1 0.25 0.28 15 6.79 80.69 21 5.7 Yes 66 -6.06 No 0 0 No -20 0.91 Yes 50 96.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63307125 + NM_032852 ATG4C 1 0.23 0.22 11 5.44 73.42 32 6 Yes 19 0.14 No 0 0 No -31 0.54 No 39 67.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 63327655 + NM_032852 ATG4C 1 1.01 0.79 41 7.34 86.37 27 6.48 Yes 14 2.4 Yes 0 0 No -26 0.91 Yes 44 94.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10655304 + NM_001281504 ATG4D 1 4.14 0.14 10 2.37 66.24 50 7.27 Yes 37 0.61 No 0 0 No -19 0.54 No 51 62.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10655458 + NM_001281504 ATG4D 1 715.07 29.81 72 9.91 87.23 34 5.87 Yes 34 0.31 No 33 0.74 Yes -33 0.92 Yes 37 88.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 106634338 - NR_104402 ATG5 1 4.01 5.13 70 8.58 88.54 20 4.5 No 7 0.83 Yes 0 0 No -32 0.72 Yes 38 86.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 106643682 - NR_104402 ATG5 1 0.3 0.4 24 10.73 88.27 40 7.21 Yes 27 1.21 Yes 0 0 No -39 0.82 Yes 31 86.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 106727697 - NR_104402 ATG5 1 0.07 0.1 7 -9.19 74.8 28 5.42 No 33 1.25 Yes 0 0 No -25 0.53 No 45 54.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 106728125 - NR_104402 ATG5 1 0.66 1.01 40 9.36 86.56 62 9.64 Yes 49 1.18 Yes 0 0 No -24 0.9 Yes 46 83.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 106759387 - NR_104402 ATG5 1 0.1 0.11 7 9.88 91.36 54 6.15 Yes 41 1.11 Yes 0 0 No -23 0.97 Yes 47 95.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 11322679 + NM_001144912 ATG7 1 18.73 3.21 64 4.67 83.28 20 4.92 No 7 0.72 No 30 0.76 Yes -30 0.46 No 40 59.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 11323878 + NM_001144912 ATG7 1 5.18 0.89 40 10.25 81.19 19 5.4 No 13 1.07 Yes 25 0.93 Yes -25 0.88 Yes 45 92.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 11330334 + NM_001144912 ATG7 1 0.69 0.11 8 5.57 80.9 44 5.24 No 25 0.72 No 25 0.46 Yes -31 0.31 No 32 56.92 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 11345977 + NM_001144912 ATG7 1 0.83 0.6 30 5.81 81.9 24 7.45 Yes 11 0.09 No 23 0.93 Yes -23 0.88 Yes 47 93.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 11388120 + NM_001144912 ATG7 1 0.9 0.67 28 4.33 79.85 30 8.5 Yes 35 1.52 Yes 0 0 No -29 0.8 Yes 41 77.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 11402779 + NM_001144912 ATG7 1 0.27 0.17 9 2.2 84.41 28 4.68 No 15 0.95 Yes 0 0 No -27 0.53 No 43 68.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 11402783 + NM_001144912 ATG7 1 2.47 1.29 50 3.01 0 32 4.9 No 19 0.93 Yes 0 0 No -31 0.55 No 39 66.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220089642 - NM_024085 ATG9A 1 0.24 0.11 7 5.43 78.88 30 5.93 Yes 7 1.3 Yes 0 0 No -29 0.86 Yes 41 88.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 220090291 - NM_024085 ATG9A 1 2.27 1.56 51 2.43 0 35 6.4 Yes 22 0.75 No 0 0 No -34 0.62 No 36 85.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 216182881 + NM_004044 ATIC 1 0.05 0.18 12 -0.65 79.62 16 6.08 Yes 73 -3.31 No 0 0 No -24 0.56 No 43 72.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 216189965 + NM_004044 ATIC 1 0.02 0.13 9 -9.34 80.02 30 5.48 No 68 1.86 Yes 0 0 No -29 0.83 Yes 41 82.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 216190473 + NM_004044 ATIC 1 0.09 0.61 23 8.06 86.16 23 7.35 Yes 10 1.32 Yes 0 0 No -22 0.92 Yes 48 92.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 216198941 + NM_004044 ATIC 1 0.08 0.39 21 3.87 0 44 6.63 Yes 73 0.49 No 0 0 No -41 0.59 No 37 65.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 216212343 + NM_004044 ATIC 1 0.06 0.47 24 5.77 0 15 4.58 No 11 1.08 Yes 23 0.71 Yes -20 0.54 No 50 73.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 216213334 + NM_004044 ATIC 1 0.02 0.11 8 0.77 68.25 34 5.32 No 32 0.63 No 0 0 No -39 0.72 Yes 31 61.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 216214260 + NM_004044 ATIC 1 0.13 0.81 42 -13.06 72.41 25 6.14 Yes 60 -2.69 No 0 0 No -24 0.82 Yes 46 38.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 38544492 - NM_001330462 ATL2 1 0.53 0.38 23 0.18 82.22 33 5.87 Yes 54 -3.18 No 0 0 No -32 0.84 Yes 38 90.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 63415586 - NM_015459 ATL3 1 0.26 0.28 18 7.72 92.47 35 6 Yes 52 0.99 Yes 0 0 No -34 0.67 Yes 36 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 63437985 - NM_015459 ATL3 1 0.34 0.15 10 6.64 75.66 35 6.04 Yes 22 0.7 No 34 0.83 Yes -34 0.75 Yes 36 67.78 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 108094262 + NM_000051 ATM 1 0.43 0.21 11 4.32 84.81 16 5.16 No 48 0.8 Yes 0 0 No -30 0.66 Yes 40 73.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108095510 + NM_000051 ATM 1 13.29 7.6 71 9.94 92.32 32 5.39 No 51 1.69 Yes 21 0.73 Yes -35 0.58 No 35 66.86 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 108096227 + NM_000051 ATM 1 0.68 0.42 24 2.09 0 42 6.93 Yes 44 0.98 Yes 41 0.6 Yes -41 0.95 Yes 29 95.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 108096890 + NM_000051 ATM 1 0.2 0.11 8 11.5 88.02 46 6.93 Yes 33 0.7 No 0 0 No -41 0.23 No 37 51.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108097112 + NM_000051 ATM 1 0.46 0.24 13 5.95 85.23 18 6.08 Yes 63 1.09 Yes 0 0 No -30 0.49 No 53 47.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108098506 + NM_000051 ATM 1 0.39 0.47 25 -2.82 0 34 6.61 Yes 21 2.02 Yes 0 0 No -33 0.58 No 37 80.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108103153 + NM_000051 ATM 1 0.15 0.13 7 5.76 75.23 33 6.16 Yes 9 1.34 Yes 0 0 No -32 0.49 No 38 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108106733 + NM_000051 ATM 1 0.3 0.18 11 5.07 79.5 27 7.66 Yes 14 2.19 Yes 0 0 No -26 0.82 Yes 44 86.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108114701 + NM_000051 ATM 1 4.82 2.74 63 8.54 89.45 25 5.4 No 32 1.16 Yes 0 0 No -44 0.5 No 26 81.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108114828 + NM_000051 ATM 1 0.21 0.11 7 5.6 85.56 31 7.02 Yes 26 0.94 Yes 0 0 No -30 0.46 No 40 52.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108115495 + NM_000051 ATM 1 0.18 0.14 8 -3.67 0 14 6.08 Yes 34 0.16 No 21 0.82 Yes -30 0.66 Yes 40 74.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 108124523 + NM_000051 ATM 1 0.1 0.11 7 4.33 77.84 25 4.8 No 59 1.06 Yes 20 0.67 Yes -24 0.47 No 46 55.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 108124581 + NM_000051 ATM 1 0.39 0.46 22 2.92 87.93 22 4.9 No 41 0.52 No 21 0.55 Yes -21 0.62 No 49 40.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 108128226 + NM_000051 ATM 1 0.31 0.25 16 3.92 73.56 27 5.26 No 42 0.97 Yes 0 0 No -26 0.65 No 44 89.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108129715 + NM_000051 ATM 1 0.59 0.71 35 -3.56 67.37 53 8.06 Yes 40 1.29 Yes 0 0 No -52 0.71 Yes 18 81.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108141808 + NM_000051 ATM 1 1.56 1.49 54 3.73 79.71 13 5.18 No 0 1.51 Yes 0 0 No -25 0.55 No 45 58.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108143434 + NM_000051 ATM 1 0.16 0.11 7 5.95 77.54 37 4.81 No 17 0.91 Yes 21 0.94 Yes -36 0.61 No 34 62.38 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 108144088 + NM_000051 ATM 1 0.49 0.4 22 4.74 84.41 40 8.21 Yes 27 1.39 Yes 0 0 No -39 0.78 Yes 31 84.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108144583 + NM_000051 ATM 1 0.14 0.13 9 11.24 88.97 38 7.11 Yes 17 1.16 Yes 0 0 No -29 0.62 No 41 70.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108151813 + NM_000051 ATM 1 0.64 0.57 32 7.53 83.43 24 5.29 No 17 1.1 Yes 0 0 No -23 0.57 No 49 57.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108153595 + NM_000051 ATM 1 0.21 0.17 8 -7.12 58.18 54 7.23 Yes 41 0.84 Yes 0 0 No -43 0.74 Yes 27 64.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108155110 + NM_000051 ATM 1 0.54 0.24 16 -6.77 79.68 28 6.7 Yes 42 1.46 Yes 0 0 No -28 0.46 No 46 51.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108158136 + NM_000051 ATM 1 1.52 1.26 48 7.71 82.2 24 6.99 Yes 11 1.41 Yes 0 0 No -23 0.79 Yes 47 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108164144 + NM_000051 ATM 1 0.13 0.1 7 8.86 82.32 18 6.15 Yes 5 1.65 Yes 0 0 No -17 0.42 No 53 78.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108167004 + NM_000051 ATM 1 1 0.61 32 1.3 68.91 34 9.74 Yes 21 0.8 Yes 0 0 No -33 0.5 No 33 47.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108171634 + NM_000051 ATM 1 0.19 0.24 15 4.19 0 43 8.57 Yes 30 1.55 Yes 0 0 No -42 0.8 Yes 28 91.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108171923 + NM_000051 ATM 1 0.13 0.15 9 7.05 86.48 27 6.04 Yes 37 0.75 No 0 0 No -26 0.56 No 44 71.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108183065 + NM_000051 ATM 1 0.17 0.13 8 4.12 79.32 22 4.99 No 36 0.91 Yes 0 0 No -21 0.75 Yes 49 76.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108183116 + NM_000051 ATM 1 0.46 0.38 22 2.07 72.93 23 5.08 No 60 0.2 No 25 0.72 Yes -25 0.52 No 47 53.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 108183140 + NM_000051 ATM 1 0.22 0.21 14 -6.77 48.8 29 5.56 Yes 16 0.1 No 0 0 No -32 0.64 No 38 29.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108184863 + NM_000051 ATM 1 2.16 1.99 59 10.89 95.2 30 5.48 No 17 1.53 Yes 0 0 No -29 0.85 Yes 41 84.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108188148 + NM_000051 ATM 1 0.75 0.6 31 6.55 76.24 25 7 Yes 49 1.2 Yes 0 0 No -32 0.49 No 48 62.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108190685 + NM_000051 ATM 1 0.15 0.13 8 -5.09 0 37 6.36 Yes 6 0.95 Yes 0 0 No -36 0.78 Yes 34 73.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108192002 + NM_000051 ATM 1 0.63 0.4 22 9.18 94.53 23 7.04 Yes 10 0.95 Yes 27 0.9 Yes -31 0.41 No 39 52.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 108196117 + NM_000051 ATM 1 0.9 0.82 39 -7.91 0 18 4.24 No 66 -3.25 No 0 0 No -17 0.45 No 57 24.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108199829 + NM_000051 ATM 1 0.28 0.19 11 2.82 79.94 20 5 No 7 0.01 No 0 0 No -19 0.52 No 51 33.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108200948 + NM_000051 ATM 1 0.33 0.36 17 -6.21 0 16 3.93 No 56 0.43 No 0 0 No -45 0.82 Yes 25 75.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108204615 + NM_000051 ATM 1 0.4 0.36 22 -2.17 68.15 28 6.69 Yes 60 1.87 Yes 0 0 No -27 0.53 No 39 72.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108206992 + NM_000051 ATM 1 0.18 0.15 8 0.64 77.52 17 4.69 No 64 -4.62 No 0 0 No -20 0.9 Yes 50 82.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108213463 + NM_000051 ATM 1 0.18 0.15 9 6.65 86.37 23 5.19 No 69 0.79 Yes 0 0 No -26 0.49 No 47 50.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108219678 + NM_000051 ATM 1 0.26 0.24 16 3.55 74.54 35 7.6 Yes 22 1.79 Yes 0 0 No -34 0.71 Yes 36 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81075864 + NM_001300728 ATMIN 1 1.05 1.13 45 6.77 80.44 25 5.29 No 12 1.13 Yes 28 0.92 Yes -24 0.92 Yes 46 92.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7043018 + NM_001940 ATN1 1 8.14 4.86 72 2.82 74.01 21 5 No 22 1.49 Yes 0 0 No -20 0.84 Yes 50 87.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7043030 + NM_001940 ATN1 1 1.82 1.06 45 -5.9 0 20 4.58 No 34 1.49 Yes 0 0 No -32 0.45 No 38 64.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 7043630 + NM_001940 ATN1 1 0.19 0.31 15 2.71 74.06 9 5.58 Yes 47 -0.47 No 0 0 No -31 0.63 No 39 62.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 7044712 + NM_001940 ATN1 1 14.14 16.67 72 7.21 93.16 23 5.39 No 10 0.43 No 0 0 No -22 0.52 No 45 25.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 7047646 + NM_001940 ATN1 1 0.71 0.57 31 -1.3 63.04 42 6.23 Yes 17 1.46 Yes 0 0 No -29 0.84 Yes 41 73.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7048285 + NM_001940 ATN1 1 0.15 0.13 8 4.45 74.18 19 5.52 No 6 1.23 Yes 0 0 No -24 0.94 Yes 46 89.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7049615 + NM_001940 ATN1 1 0.39 0.43 25 8.92 86.16 22 7.28 Yes 9 1.28 Yes 0 0 No -21 0.9 Yes 49 92.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7050584 + NM_001940 ATN1 1 0.2 0.25 14 2.44 71.11 40 7.3 Yes 27 1.29 Yes 0 0 No -39 0.65 No 31 65.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 7050587 + NM_001940 ATN1 1 0.15 0.19 11 3.23 71.58 43 7.49 Yes 30 1.3 Yes 0 0 No -42 0.61 No 28 59.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 151131338 - NM_004045 ATOX1 1 1.03 3.32 70 2.69 74.72 28 6.78 Yes 67 0.95 Yes 0 0 No -27 0.9 Yes 43 91.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 151133456 - NM_004045 ATOX1 1 1.59 4.92 70 8.26 82.82 27 6.39 Yes 14 0.86 Yes 0 0 No -27 0.7 Yes 43 68.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 47488398 + NM_020453 ATP10D 1 0.29 0.17 11 2.6 65.12 44 6.49 Yes 56 0.21 No 0 0 No -41 0.58 No 29 52.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 47488401 + NM_020453 ATP10D 1 1.25 0.64 29 4.66 82.34 47 6.71 Yes 59 0.2 No 0 0 No -44 0.56 No 30 54.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 47488528 + NM_020453 ATP10D 1 0.29 0.17 9 4.97 77.7 19 5 No 29 0.54 No 0 0 No -41 0.42 No 43 68.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 47493018 + NM_020453 ATP10D 1 0.27 0.15 8 7.54 78.4 56 6.47 Yes 5 1.39 Yes 0 0 No -26 0.86 Yes 44 82.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 47514525 + NM_020453 ATP10D 1 0.18 0.11 8 -0.07 0 36 6.08 Yes 23 0.43 No 0 0 No -35 0.96 Yes 35 97.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 47515979 + NM_020453 ATP10D 1 0.31 0.24 13 4.03 85.01 24 4.81 No 51 -3.8 No 0 0 No -23 0.65 No 52 30.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 47517766 + NM_020453 ATP10D 1 0.18 0.14 7 12.4 90.21 17 5.57 Yes 4 0.15 No 0 0 No -28 0.39 No 42 54.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 47519503 + NM_020453 ATP10D 1 0.27 0.15 10 11.86 89.17 28 5.65 Yes 15 0.5 No 0 0 No -27 0.82 Yes 43 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 47530130 + NM_020453 ATP10D 1 0.43 0.35 19 9.9 91.79 32 5.02 No 3 0.42 No 0 0 No -26 0.36 No 44 62.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 47538747 + NM_020453 ATP10D 1 6.05 3.36 65 2.1 60.41 40 7.34 Yes 27 0.9 Yes 39 0.61 Yes -39 0.73 Yes 31 83.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 47547419 + NM_020453 ATP10D 1 3.82 2.19 56 12.1 88.25 24 4.25 No 6 1.38 Yes 0 0 No -23 0.72 Yes 47 87.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 47578838 + NM_020453 ATP10D 1 1.2 0.69 31 8.41 87.69 22 5.29 No 60 1.09 Yes 0 0 No -21 0.55 No 49 80.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 47584885 + NM_020453 ATP10D 1 6.46 3.35 68 5 80.31 91 8.12 Yes 63 1.61 Yes 23 0.7 Yes -33 0.25 No 37 53.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 47589096 + NM_020453 ATP10D 1 2.39 1.24 41 7.47 80.55 38 4.59 No 76 0.71 No 0 0 No -28 0.81 Yes 42 84.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 47590013 + NM_020453 ATP10D 1 0.29 0.15 8 5.97 83.88 34 7.2 Yes 21 -0.51 No 0 0 No -33 0.8 Yes 37 82.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113464064 + NM_032189 ATP11A 1 0.81 0.4 24 5.05 77.67 29 5.77 Yes 37 0.52 No 0 0 No -28 0.88 Yes 42 70.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113479788 + NM_032189 ATP11A 1 0.77 0.43 22 4.87 75.64 27 5.46 No 57 1.07 Yes 0 0 No -26 0.97 Yes 44 96.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 113532530 + NM_032189 ATP11A 1 291.96 21.32 72 -1.99 58.02 124 11.22 Yes 39 1.38 Yes 40 0.27 Yes -40 0.51 No 19 64.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 113536126 + NM_032189 ATP11A 1 50.44 4.44 71 8.22 85.54 23 5.91 Yes 10 1.92 Yes 22 0.97 Yes -22 0.85 Yes 48 93.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 182547710 + NM_014616 ATP11B 1 0.08 0.15 9 10.13 90.96 26 5.29 No 13 0.43 No 0 0 No -25 0.72 Yes 45 50.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 182551301 + NM_014616 ATP11B 1 0.16 0.29 16 8.24 87.64 23 5.83 Yes 10 1.17 Yes 0 0 No -22 0.85 Yes 48 93.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 182554175 + NM_014616 ATP11B 1 0.17 0.39 21 7.26 92.56 16 5.18 No 58 0.85 Yes 0 0 No -22 0.46 No 49 50.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182554740 + NM_014616 ATP11B 1 0.18 0.33 21 7.68 79.47 29 4.77 No 47 0.6 No 0 0 No -33 0.83 Yes 37 62.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 182554839 + NM_014616 ATP11B 1 0.22 0.36 20 2.71 70.9 39 6.08 Yes 58 0.37 No 23 0.79 Yes -32 0.84 Yes 38 73.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 182554860 + NM_014616 ATP11B 1 0.06 0.13 8 -11.87 0 18 5.46 No 5 0.65 No 0 0 No -23 0.55 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 182562301 + NM_014616 ATP11B 1 0.15 0.33 15 5.5 81.54 23 4.83 No 46 0.93 Yes 0 0 No -22 0.84 Yes 48 89.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 182563739 + NM_014616 ATP11B 1 0.11 0.21 11 4.67 66.88 64 7.88 Yes 51 0.9 Yes 0 0 No -23 0.61 No 38 49.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182566967 + NM_014616 ATP11B 1 1.41 1.67 55 4.86 81.96 32 6.78 Yes 64 0.97 Yes 0 0 No -31 0.52 No 39 74.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 182590147 + NM_014616 ATP11B 1 0.25 0.53 27 -0.62 0 72 7.69 Yes 59 2.03 Yes 0 0 No -39 0.44 No 31 68.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182605444 + NM_014616 ATP11B 1 0.05 0.11 7 3 70.76 48 8.12 Yes 35 1.12 Yes 0 0 No -42 0.44 No 28 54.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182603902 + NM_014616 ATP11B 1 0.06 0.14 8 8.28 80.57 26 5.57 Yes -1 0.13 No 0 0 No -25 0.7 Yes 45 70.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 182605444 + NM_014616 ATP11B 1 0.16 0.36 17 3 70.76 48 8.12 Yes 35 1.12 Yes 0 0 No -42 0.44 No 28 54.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182620268 + NM_014616 ATP11B 1 0.08 0.13 9 10.6 79.54 39 7.33 Yes 26 2.25 Yes 38 0.65 Yes -38 0.81 Yes 32 92.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 182623141 + NM_014616 ATP11B 1 0.07 0.13 8 6.6 68.54 23 5.24 No 45 0.8 Yes 0 0 No -29 0.51 No 41 53.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182623581 + NM_014616 ATP11B 1 0.23 0.4 24 11.99 91.77 33 5.78 Yes 20 0.66 No 32 0.63 Yes -27 0.47 No 37 51.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 182625756 + NM_014616 ATP11B 1 0.06 0.11 8 7.03 89.01 23 4.7 No 3 0.22 No 0 0 No -22 0.8 Yes 48 79.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 138811138 - NM_173694 ATP11C 1 0.39 0.15 9 -2.5 0 24 4.58 No 65 0.43 No 25 0.59 Yes -23 0.64 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 138814685 - NM_173694 ATP11C 1 3.36 0.89 42 2.27 62.3 79 8.8 Yes 66 0.77 Yes 32 0.48 Yes -52 0.54 No 18 75.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 138819956 - NM_173694 ATP11C 1 4.09 1.32 48 9.31 88.19 16 4.12 No 3 0.85 Yes 26 0.89 Yes -24 0.73 Yes 46 70.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 138850613 - NM_173694 ATP11C 1 0.28 0.22 13 0.91 55.85 31 5.82 Yes 74 1.22 Yes 27 0.37 Yes -30 0.76 Yes 40 51.8 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 138869384 - NM_173694 ATP11C 1 0.13 0.11 7 7.6 80.95 25 5.39 No 54 0.59 No 0 0 No -24 0.76 Yes 46 72.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 138879436 - NM_173694 ATP11C 1 0.3 0.22 15 1.43 68.42 32 5.97 Yes 30 1.27 Yes 0 0 No -31 0.6 No 39 60.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 138880255 - NM_173694 ATP11C 1 0.38 0.32 13 4.96 70.23 25 6.69 Yes -1 0.17 No 0 0 No -28 0.91 Yes 42 91.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 138883241 - NM_173694 ATP11C 1 0.29 0.25 15 6.64 80.65 18 5.39 No -2 0.01 No 0 0 No -29 0.84 Yes 41 60.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 138884257 - NM_173694 ATP11C 1 3.18 2.53 63 7.69 87.36 52 6.92 Yes 39 1.13 Yes 0 0 No -25 0.6 No 33 67.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 138893960 - NM_173694 ATP11C 1 1 0.72 32 12.35 90.27 33 5.61 Yes 50 1.53 Yes 0 0 No -31 0.48 No 39 49.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 138906272 - NM_173694 ATP11C 1 0.59 0.26 17 5.88 78.68 36 5.76 Yes 19 0.82 Yes 0 0 No -35 0.58 No 35 57.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19756321 - NM_020410 ATP13A1 1 1.21 1.44 52 3.26 82.18 19 4.9 No 32 1.47 Yes 0 0 No -44 0.56 No 26 69.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19756376 - NM_020410 ATP13A1 1 0.45 0.53 25 1.12 0 20 4.46 No 29 0.6 No 23 0.95 Yes -41 0.42 No 57 39.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 19756623 - NM_020410 ATP13A1 1 0.34 0.5 28 0.78 67.03 22 4.86 No 20 1.17 Yes 29 0.54 Yes -21 0.48 No 31 43.37 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 19760492 - NM_020410 ATP13A1 1 0.23 0.21 12 -3.65 0 15 3.14 No 23 -1.8 No 21 0.92 Yes -17 0.42 No 53 39.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 19760625 - NM_020410 ATP13A1 1 0.1 0.13 7 6.67 83.38 28 5.65 Yes 15 0.21 No 0 0 No -27 0.95 Yes 43 95.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19760648 - NM_020410 ATP13A1 1 0.42 0.47 27 6.15 85.62 18 5.29 No 63 0.75 No 0 0 No -21 0.67 Yes 49 80 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19764695 - NM_020410 ATP13A1 1 0.07 0.13 9 1.3 0 17 3 No 20 1.41 Yes 0 0 No -32 0.84 Yes 38 84.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19764884 - NM_020410 ATP13A1 1 10.73 11.72 72 4.64 87.45 23 5.1 No 10 0.71 No 22 0.97 Yes -22 0.96 Yes 48 97.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19766005 - NM_020410 ATP13A1 1 0.39 0.58 31 2.06 76.31 35 5.55 No 51 2.41 Yes 0 0 No -33 0.89 Yes 37 84.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19766247 - NM_020410 ATP13A1 1 0.06 0.1 7 -8.23 0 11 4.02 No 75 -0.34 No 0 0 No -33 0.55 No 37 24.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19766278 - NM_020410 ATP13A1 1 0.14 0.18 10 -4.5 0 18 4.12 No 50 -1.03 No 25 0.43 Yes -56 0.73 Yes 14 61.66 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 19767078 - NM_020410 ATP13A1 1 0.16 0.19 12 5.34 80.45 18 7.54 Yes 54 -2.75 No 0 0 No -35 0.7 Yes 31 47.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 19768450 - NM_020410 ATP13A1 1 0.4 0.49 24 6.8 91.17 25 5.18 No 68 0.59 No 0 0 No -24 0.73 Yes 49 65.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 19770634 - NM_020410 ATP13A1 1 5.69 4.63 70 -2.93 0 16 5.48 No 3 1.01 Yes 20 0.43 Yes -15 0.6 No 55 70.51 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 19773243 - NM_020410 ATP13A1 1 0.79 0.82 34 7.24 89.72 25 5.2 No 21 0.1 No 0 0 No -27 0.85 Yes 43 83.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19773309 - NM_020410 ATP13A1 1 0.81 0.78 36 6.67 78.65 32 6.24 Yes 19 1.63 Yes 0 0 No -31 0.88 Yes 39 85.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 17318838 - NM_022089 ATP13A2 1 1.13 0.33 21 8.96 84.29 40 6.74 Yes 27 0.83 Yes 29 0.65 Yes -29 0.62 No 41 82.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 17318895 - NM_022089 ATP13A2 1 0.38 0.11 7 -10.77 63.64 26 5.66 Yes 13 0.69 No 0 0 No -25 0.92 Yes 45 91.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 17322974 - NM_022089 ATP13A2 1 0.74 0.21 11 -3.54 61.98 21 5.2 No 47 2.01 Yes 20 0.32 Yes -59 0.92 Yes 11 75.8 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 17327003 - NM_022089 ATP13A2 1 7.25 2.28 61 4.76 80.24 22 6 Yes 40 2.39 Yes 21 0.72 Yes -52 0.5 No 18 55.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 17330904 - NM_022089 ATP13A2 1 22.45 3.17 68 0.93 66.95 31 6.43 Yes 52 -1.12 No 28 0.76 Yes -31 0.66 Yes 40 75.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 194130019 - NM_024524 ATP13A3 1 2.26 0.49 27 9.49 94.12 27 5.06 No 14 1.33 Yes 0 0 No -32 0.69 Yes 38 86.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 194133018 - NM_024524 ATP13A3 1 594.85 101.39 72 5.31 73.13 44 4.43 No 16 0.81 Yes 22 0.81 Yes -28 0.49 No 42 59.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 194133790 - NM_024524 ATP13A3 1 1.27 0.21 14 4.97 82.64 50 6.99 Yes 34 0.68 No 0 0 No -27 0.57 No 47 59.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 194140542 - NM_024524 ATP13A3 1 0.18 0.31 16 9.23 98.88 27 6.24 Yes 14 1.83 Yes 0 0 No -26 0.92 Yes 44 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 194140634 - NM_024524 ATP13A3 1 0.25 0.39 20 5.05 78.67 44 8.46 Yes 31 0.63 No 0 0 No -25 0.36 No 37 42.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 194146142 - NM_024524 ATP13A3 1 0.42 1.1 42 7.99 93.23 21 5 No 66 -3.02 No 29 0.87 Yes -23 0.44 No 52 62.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 194146787 - NM_024524 ATP13A3 1 0.04 0.11 8 1.71 76.08 29 5.04 No 44 1.29 Yes 0 0 No -25 0.49 No 38 51.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 194147890 - NM_024524 ATP13A3 1 0.06 0.14 7 9.66 87.01 37 7.81 Yes 73 -3.78 No 0 0 No -36 0.94 Yes 34 93.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 194147890 - NM_024524 ATP13A3 1 0.06 0.15 10 9.66 87.01 37 7.81 Yes 73 -3.78 No 0 0 No -36 0.94 Yes 34 93.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 194154624 - NM_024524 ATP13A3 1 0.05 0.17 12 -2.91 79.65 36 7.65 Yes 8 0.67 No 0 0 No -35 0.38 No 35 77.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 194158205 - NM_024524 ATP13A3 1 0.05 0.1 7 -0.83 0 21 5.17 No 40 0.72 No 31 0.78 Yes -20 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 194159501 - NM_024524 ATP13A3 1 0.12 0.19 10 6.68 86.87 41 5.39 No 32 0.88 Yes 0 0 No -34 0.55 No 36 76.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 194168732 - NM_024524 ATP13A3 1 0.14 0.43 24 -3.58 0 12 4 No 16 1.08 Yes 0 0 No -43 0.52 No 27 57.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 194169363 - NM_024524 ATP13A3 1 0.06 0.14 7 -13.02 72.24 44 8.55 Yes 53 1.45 Yes 0 0 No -43 0.41 No 34 47.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 194170399 - NM_024524 ATP13A3 1 0.2 0.44 23 1.52 0 43 7.38 Yes 30 1 Yes 0 0 No -42 0.89 Yes 28 85.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 194171000 - NM_024524 ATP13A3 1 0.08 0.24 10 -2.02 0 14 3.82 No 22 0.06 No 0 0 No -34 0.7 Yes 36 81.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 194171005 - NM_024524 ATP13A3 1 0.06 0.17 12 -9.51 0 30 6 Yes 17 0.09 No 0 0 No -29 0.82 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 194175095 - NM_024524 ATP13A3 1 0.04 0.15 9 7.36 89.29 22 5.85 Yes 9 1.1 Yes 0 0 No -21 0.82 Yes 49 83.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 194175148 - NM_024524 ATP13A3 1 0.04 0.14 9 3.04 74.48 14 6.52 Yes 1 1.1 Yes 32 0.85 Yes -23 0.65 No 47 62.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 116930073 + NM_001160234 ATP1A1 1 0.03 0.33 15 7.44 82.08 24 5.83 Yes 73 0.44 No 0 0 No -27 0.81 Yes 43 78.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 116931263 + NM_001160234 ATP1A1 1 0.01 0.14 10 -3.6 0 32 9.87 Yes 19 1.52 Yes 0 0 No -31 0.87 Yes 39 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 116931519 + NM_001160234 ATP1A1 1 0.02 0.18 10 3.91 0 25 5.99 Yes 12 0.88 Yes 33 0.83 Yes -29 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 116937712 + NM_001160234 ATP1A1 1 0.02 0.24 14 3.66 72.5 13 4.27 No 40 0.64 No 23 0.88 Yes -25 0.48 No 41 79.07 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 116937755 + NM_001160234 ATP1A1 1 0.02 0.24 13 9.1 87.34 16 5.74 Yes 43 0.46 No 0 0 No -32 0.46 No 23 44.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 116947006 + NM_001160234 ATP1A1 1 0.04 0.36 19 -6.68 0 18 4.47 No 71 1.07 Yes 33 0.51 Yes -47 0.89 Yes 23 53.97 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 141620977 + NM_001679 ATP1B3 1 0.06 0.22 14 10.82 95.41 29 5.92 Yes 16 0.15 No 28 0.61 Yes -26 0.44 No 42 52.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 141623575 + NM_001679 ATP1B3 1 0.05 0.29 19 4.49 0 38 6.36 Yes 61 1.29 Yes 0 0 No -37 0.67 Yes 33 61.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 141632448 + NM_001679 ATP1B3 1 0.04 0.29 10 6.65 76.24 23 5.91 Yes 56 0.61 No 0 0 No -22 0.87 Yes 48 82.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 141633877 + NM_001679 ATP1B3 1 0.08 0.26 16 4.5 88.3 21 3.98 No 3 0.08 No 0 0 No -20 0.28 No 42 36.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 141634742 + NM_001679 ATP1B3 1 0.05 0.17 8 5.78 81.94 30 5.19 No 3 1.09 Yes 0 0 No -29 0.58 No 41 86.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 141635217 + NM_001679 ATP1B3 1 0.03 0.13 8 8.67 80.06 23 7.6 Yes 10 1.06 Yes 28 0.73 Yes -28 0.46 No 42 54.38 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 58344496 + NM_001320408 ATP23 1 0.69 0.47 25 8.03 87.15 24 7.42 Yes 11 1.35 Yes 0 0 No -23 0.94 Yes 47 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 58345544 + NM_001320408 ATP23 1 0.6 0.42 18 2.18 0 32 6.25 Yes 19 1.53 Yes 27 0.82 Yes -31 0.55 No 39 71.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 28890429 - NR_046290 ATP2A1-AS1 1 38.74 3.03 66 1.58 83.49 16 5.09 No 3 1.5 Yes 24 0.53 Yes -19 0.72 Yes 51 56.02 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 110733508 + NM_170665 ATP2A2 1 0.15 0.71 35 9.55 87.81 28 4.77 No 15 0.65 No 0 0 No -27 0.83 Yes 43 83.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110742099 + NM_170665 ATP2A2 1 0.02 0.15 9 9.7 87 36 7.72 Yes 23 1.11 Yes 0 0 No -35 0.4 No 35 51.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 110763479 + NM_170665 ATP2A2 1 0.03 0.25 14 7.41 81.42 19 5.87 Yes 10 -2.57 No 0 0 No -22 0.61 No 48 54.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110764161 + NM_170665 ATP2A2 1 0.02 0.13 7 5.79 70.77 23 5.39 No 62 -3.55 No 31 0.16 Yes -22 0.66 No 48 66.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 110764217 + NM_170665 ATP2A2 1 0.16 1.1 46 3.01 75.21 21 5.53 No 8 0.45 No 0 0 No -25 0.92 Yes 45 90.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110769776 + NM_170665 ATP2A2 1 0.13 0.47 29 8.47 82.65 27 5.74 Yes 14 0.84 Yes 26 0.88 Yes -26 0.76 Yes 44 87.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110777333 + NM_170665 ATP2A2 1 0.04 0.18 11 4.66 79.73 17 4.69 No 51 0.23 No 0 0 No -49 0.36 No 21 58.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110781050 + NM_170665 ATP2A2 1 0.08 0.4 20 3.31 89.98 9 4.08 No 69 0.97 Yes 30 0.21 Yes -54 0.59 No 16 73.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 110781053 + NM_170665 ATP2A2 1 0.02 0.13 7 0.69 80.49 12 4.35 No 72 0.97 Yes 30 0.21 Yes -57 0.63 No 13 85.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 110781949 + NM_170665 ATP2A2 1 0.28 0.96 39 9.2 86.05 32 8 Yes 19 2.14 Yes 0 0 No -31 0.88 Yes 39 91.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110783029 + NM_170665 ATP2A2 1 0.06 0.26 14 1.24 70.88 13 6.32 Yes 55 -4.17 No 28 0.92 Yes -26 0.5 No 44 44.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 110783736 + NM_170665 ATP2A2 1 0.02 0.1 7 -2.88 0 17 4.12 No 19 1.06 Yes 0 0 No -31 0.3 No 50 80.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 110784017 + NM_170665 ATP2A2 1 0.08 0.57 29 7.04 0 15 4.58 No 22 1.26 Yes 0 0 No -34 0.88 Yes 36 93.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3828736 - NM_174957 ATP2A3 1 513.6 132.42 72 9.07 93.7 26 8.23 Yes 13 0.71 No 26 0.92 Yes -25 0.64 No 44 69.02 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 3831607 - NM_174957 ATP2A3 1 1.75 0.47 25 8.05 93.57 18 4.9 No 19 2.3 Yes 0 0 No -21 0.81 Yes 49 71.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3831622 - NM_174957 ATP2A3 1 10.11 2.79 56 5.62 79.6 17 5.56 No 4 2.31 Yes 24 0.95 Yes -24 0.84 Yes 46 89.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 3832063 - NM_174957 ATP2A3 1 0.06 0.11 8 7.18 0 15 4.58 No 28 1.18 Yes 0 0 No -40 0.81 Yes 30 90.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3833777 - NM_174957 ATP2A3 1 0.21 0.31 17 6.26 77.55 26 5.66 Yes 13 0.02 No 0 0 No -28 0.44 No 42 57.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 3834217 - NM_174957 ATP2A3 1 0.15 0.25 12 5.93 82.31 32 5.51 No 58 1.16 Yes 0 0 No -31 0.72 Yes 39 60.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 3838563 - NM_174957 ATP2A3 1 0.48 0.65 33 1.77 0 18 3.51 No 76 -2.4 No 0 0 No -34 0.82 Yes 36 83.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 3839729 - NM_174957 ATP2A3 1 0.16 0.26 15 2.86 60.85 26 6.63 Yes 35 1.11 Yes 0 0 No -25 0.96 Yes 45 94.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3848673 - NM_174957 ATP2A3 1 0.19 0.18 10 4.3 74.75 25 5.48 No 50 -3.85 No 26 0.76 Yes -24 0.88 Yes 46 74.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 3855071 - NM_174957 ATP2A3 1 0.05 0.1 7 4.78 81.25 22 5.29 No NA NA NA 0 0 No -24 0.7 Yes 49 50.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 3855074 - NM_174957 ATP2A3 1 0.1 0.17 11 4.24 73.41 19 5 No NA NA NA 0 0 No -21 0.73 Yes 52 47.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 89997721 - NM_001001323 ATP2B1 1 0.1 0.21 13 3.31 71.75 23 4.75 No 72 0.56 No 23 0.79 Yes -22 0.66 No 48 72.1 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 90011258 - NM_001001323 ATP2B1 1 0.08 0.19 11 2.49 65.73 43 6.39 Yes 59 1.58 Yes 0 0 No -42 0.88 Yes 28 85.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 130636155 + NM_001001486 ATP2C1 1 0.35 0.38 22 6.02 86.39 53 7.89 Yes 40 1.04 Yes 0 0 No -34 0.9 Yes 36 94.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 130653466 + NM_001001486 ATP2C1 1 0.05 0.17 10 -9.84 0 27 7.74 Yes 14 0.74 No 0 0 No -26 0.69 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 130658746 + NM_001001486 ATP2C1 1 0.03 0.11 7 10.11 81.95 62 6.03 Yes 49 0.2 No 0 0 No -27 0.58 No 43 63.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 130669098 + NM_001001486 ATP2C1 1 0.04 0.11 7 6.75 70.43 39 6.1 Yes 8 1.07 Yes 0 0 No -32 0.58 No 42 62.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 130680158 + NM_001001486 ATP2C1 1 0.06 0.18 10 11.12 86.68 31 5.85 Yes 8 1.14 Yes 0 0 No -30 0.33 No 40 50.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 130680338 + NM_001001486 ATP2C1 1 0.58 1.63 51 9.72 86.26 28 4.98 No 37 1.14 Yes 0 0 No -27 0.51 No 43 54.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 130682815 + NM_001001486 ATP2C1 1 0.05 0.13 7 -13.93 0 38 7.17 Yes 25 1.3 Yes 28 0.26 Yes -25 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 130685026 + NM_001001486 ATP2C1 1 0.29 0.75 32 8.1 82.45 43 6.62 Yes 5 0.3 No 0 0 No -31 0.46 No 53 48.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 130698956 + NM_001001486 ATP2C1 1 0.15 0.44 27 4.26 76.5 50 7.87 Yes 37 0.74 No 0 0 No -29 0.39 No 35 49.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 130699025 + NM_001001486 ATP2C1 1 0.18 0.54 23 7.32 83.47 77 7.83 Yes 6 1.5 Yes 0 0 No -31 0.87 Yes 39 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 130699429 + NM_001001486 ATP2C1 1 0.04 0.15 9 0.28 0 33 5.69 Yes 3 0.8 Yes 0 0 No -32 0.66 Yes 38 76.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 130711774 + NM_001001486 ATP2C1 1 0.04 0.15 9 -1.14 0 18 3.57 No 58 0.47 No 18 0.43 Yes -18 0.54 No 53 70.4 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 130712784 + NM_001001486 ATP2C1 1 0.17 0.69 34 -1.56 0 17 4.24 No 39 -0.71 No 0 0 No -51 0.83 Yes 19 77.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 130715596 + NM_001001486 ATP2C1 1 0.13 0.43 23 5.82 77.4 58 7.02 Yes 45 1.36 Yes 20 0.79 Yes -37 0.57 No 37 58.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 130718416 + NM_001001486 ATP2C1 1 0.1 0.21 13 4.61 85.9 22 5.1 No 9 0.62 No 0 0 No -22 0.64 No 49 76.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 43664365 - NM_001001937 ATP5A1 1 0.05 0.67 31 6.99 83.48 14 4.49 No 1 0.67 No 25 0.94 Yes -26 0.61 No 50 60.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 43666220 - NM_001001937 ATP5A1 1 0.01 0.13 9 -3.48 0 20 5.08 No 52 0.77 Yes 0 0 No -28 0.55 No 45 73.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 43666445 - NM_001001937 ATP5A1 1 0.01 0.11 7 1.77 77.96 26 4.92 No 51 0.41 No 0 0 No -25 0.75 Yes 45 91.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 43668223 - NM_001001937 ATP5A1 1 0.01 0.17 11 -1.41 0 19 5.01 No 63 1.65 Yes 0 0 No -24 0.75 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 43673332 - NM_001001937 ATP5A1 1 0.03 0.32 17 8.14 84.02 24 6.24 Yes 11 1.52 Yes 23 0.91 Yes -23 0.92 Yes 47 92.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 43675090 - NM_001001937 ATP5A1 1 0.04 0.58 28 -0.58 0 11 4.12 No 74 0.98 Yes 19 0.39 Yes -26 0.65 No 44 47.8 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 43677775 - NM_001001937 ATP5A1 1 0.02 0.29 15 10.11 84.66 25 5.57 Yes 20 0.75 No 0 0 No -24 0.51 No 46 64.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57032212 - NM_001686 ATP5B 1 0.01 0.26 18 0.13 0 28 6.27 Yes 15 1.44 Yes 31 0.95 Yes -27 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 57032981 - NM_001686 ATP5B 1 0.02 0.38 22 4.86 88.12 19 4.9 No 53 -2.75 No 19 0.4 Yes -17 0.72 Yes 53 77.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57036469 - NM_001686 ATP5B 1 0.22 5.81 71 7.01 89.06 24 5.39 No 8 1.08 Yes 23 0.82 Yes -27 0.83 Yes 43 80.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57036644 - NM_001686 ATP5B 1 0.01 0.15 10 8.21 90.41 30 6 Yes 67 0.81 Yes 23 0.84 Yes -26 0.75 Yes 41 77.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57036752 - NM_001686 ATP5B 1 0.03 0.72 35 6.43 78.57 39 6.48 Yes 31 0.86 Yes 0 0 No -43 0.79 Yes 27 90.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57037770 - NM_001686 ATP5B 1 0.05 1.75 54 -6.61 0 15 3.82 No 63 -2.31 No 22 0.65 Yes -35 0.52 No 37 59.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 57039099 - NM_001686 ATP5B 1 0.01 0.15 9 1.31 72.39 38 6.59 Yes 61 2.21 Yes 24 0.74 Yes -30 0.5 No 13 16.32 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57039165 - NM_001686 ATP5B 1 0.01 0.18 10 4.49 72.56 24 6.14 Yes 61 1.25 Yes 29 0.51 Yes -16 0.44 No 47 72.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 7839016 + NM_001001973 ATP5C1 1 0.07 0.5 23 1.31 0 10 3.67 No 31 1.05 Yes 0 0 No -29 0.7 Yes 40 73.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7839016 + NM_001001973 ATP5C1 1 0.01 0.11 7 1.31 0 10 3.67 No 31 1.05 Yes 0 0 No -29 0.7 Yes 40 73.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7840954 + NM_001001973 ATP5C1 1 0.02 0.21 14 -20.05 0 25 6.08 Yes 71 0.93 Yes 0 0 No -37 0.39 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 7841553 + NM_001001973 ATP5C1 1 0.19 1.54 49 2.58 0 16 4 No 3 0.58 No 0 0 No -27 0.36 No 43 48.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 7841707 + NM_001001973 ATP5C1 1 0.08 0.69 27 0.36 70.65 23 5.1 No 46 1.29 Yes 25 0.7 Yes -58 0.64 No 12 72.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 7842181 + NM_001001973 ATP5C1 1 0.01 0.15 10 10.72 87.01 24 6.16 Yes 40 -2.6 No 0 0 No -31 0.62 No 39 71.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 7843475 + NM_001001973 ATP5C1 1 0.29 2.74 66 12.79 89.15 28 5.66 Yes 54 0.5 No 27 0.75 Yes -27 0.71 Yes 43 73.64 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 7844236 + NM_001001973 ATP5C1 1 0.14 1.38 45 0.28 0 37 4.24 No 9 0.76 No 27 0.78 Yes -21 0.86 Yes 49 81.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 7844324 + NM_001001973 ATP5C1 1 0.02 0.17 9 3.89 80.26 19 5.36 No 72 -3.99 No 0 0 No -23 0.48 No 47 60.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 7849660 + NM_001001973 ATP5C1 1 0.01 0.13 7 6.34 80.65 14 4.97 No 52 0.96 Yes 0 0 No -22 0.96 Yes 48 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1242484 + NM_001687 ATP5D 1 0.33 0.79 34 6.88 76.13 22 5.28 No 9 -1.23 No 0 0 No -21 0.87 Yes 49 59.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1244317 + NM_001687 ATP5D 1 0.17 0.94 37 -2.52 0 27 7.87 Yes 14 2.07 Yes 0 0 No -26 0.96 Yes 44 93.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111996796 + NM_001688 ATP5F1 1 0.01 0.15 10 6.06 81.66 30 6.72 Yes 17 0.7 No 25 0.76 Yes -22 0.66 Yes 41 67.5 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 111996842 + NM_001688 ATP5F1 1 0.17 2.07 62 0.54 0 19 4.36 No 63 0.68 No 0 0 No -35 0.51 No 35 81.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 111996864 + NM_001688 ATP5F1 1 0.01 0.1 7 3.31 86.24 20 4.76 No 31 -2.53 No 0 0 No -20 0.61 No 50 42.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 111998848 + NM_001688 ATP5F1 1 0.01 0.15 10 8.36 88.63 25 7.31 Yes 52 0.92 Yes 24 0.62 Yes -24 0.76 Yes 46 69.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 111998848 + NM_001688 ATP5F1 1 0.13 1.79 60 8.36 88.63 25 7.31 Yes 52 0.92 Yes 24 0.62 Yes -24 0.76 Yes 46 69.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 112000663 + NM_001688 ATP5F1 1 0.02 0.26 15 5.8 83.44 17 3.47 No 49 0.49 No 0 0 No -20 0.94 Yes 50 96.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 46971710 + NM_005175 ATP5G1 1 0.11 0.99 43 3.61 70.94 38 5.77 Yes 68 0.91 Yes 27 0.34 Yes -34 0.75 Yes 36 69.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 46972544 + NM_005175 ATP5G1 1 0.01 0.13 8 7.07 90.18 15 4.92 No 64 0.87 Yes 20 0.76 Yes -18 0.49 No 52 56.53 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 46972157 + NM_005175 ATP5G1 1 0.05 0.46 25 4.57 83.77 22 6.15 Yes 27 1.05 Yes 0 0 No -35 0.7 Yes 35 67.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 46972169 + NM_005175 ATP5G1 1 0.05 0.53 27 -1.93 0 20 4.01 No 39 1.05 Yes 0 0 No -47 0.61 No 23 65.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 46972528 + NM_005175 ATP5G1 1 0.02 0.22 12 5.02 0 14 4.47 No 48 0.87 Yes 20 0.76 Yes -60 0.53 No 20 63.33 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 46972544 + NM_005175 ATP5G1 1 1.26 12.32 72 7.07 90.18 15 4.92 No 64 0.87 Yes 20 0.76 Yes -18 0.49 No 52 56.53 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 46972810 + NM_005175 ATP5G1 1 0.04 0.53 21 3.3 69.83 19 4.94 No 6 0.5 No 0 0 No -24 0.8 Yes 46 82.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 54060537 - NM_001002031 ATP5G2 1 0.11 2.14 53 1.73 0 46 8.77 Yes 33 1.74 Yes 0 0 No -45 0.7 Yes 25 79.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 54063076 - NM_001002031 ATP5G2 1 0.09 1.6 54 6.76 78.07 13 3.87 No 15 1.51 Yes 0 0 No -27 0.91 Yes 43 95.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 54063124 - NM_001002031 ATP5G2 1 0.06 1.03 39 -4.79 77.92 29 6.88 Yes 16 0.21 No 0 0 No -28 0.89 Yes 42 87.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 54063727 - NM_001002031 ATP5G2 1 0.04 0.78 38 -7.1 0 9 3.87 No 26 1.7 Yes 0 0 No -38 0.85 Yes 32 90.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 54063737 - NM_001002031 ATP5G2 1 0.04 0.64 29 -2.19 0 29 6.78 Yes 16 1.73 Yes 32 0.83 Yes -28 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 54063774 - NM_001002031 ATP5G2 1 0.02 0.32 11 3.68 77.91 15 5.29 No 2 1.14 Yes 32 0.83 Yes -23 0.65 No 47 44.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 54063899 - NM_001002031 ATP5G2 1 0.18 3.08 67 5.44 78.95 29 5.74 Yes 36 -2.19 No 29 0.31 Yes -29 0.43 No 41 49.87 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 54065861 - NM_001002031 ATP5G2 1 0.01 0.13 8 3.01 0 31 6.47 Yes 18 0.83 Yes 0 0 No -30 0.9 Yes 40 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 176043130 - NM_001689 ATP5G3 1 0 0.11 8 -9.81 0 26 5.44 No 59 1.1 Yes 0 0 No -25 0.74 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 176043864 - NM_001689 ATP5G3 1 0.03 0.39 18 6.91 87.75 28 6.48 Yes 15 0.18 No 0 0 No -27 0.84 Yes 43 78.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 176046191 - NM_001689 ATP5G3 1 0.03 0.28 15 -9.43 0 30 5.42 No 17 0.8 Yes 0 0 No -29 0.55 No 46 68.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 176046193 - NM_001689 ATP5G3 1 0.02 0.17 9 -7.31 75.43 28 5.24 No 15 0.81 Yes 0 0 No -27 0.58 No 48 66.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 176046212 - NM_001689 ATP5G3 1 0.86 9.03 72 -2.97 69.95 9 5 No -4 0.41 No 18 0.19 Yes -18 0.78 Yes 62 56.6 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 73038783 - NM_001003785 ATP5H 1 0.06 0.29 16 -2.12 56.68 60 5.53 No 47 1.02 Yes 32 0.28 Yes -38 0.4 No 20 78.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 666302 - NR_033743 ATP5I 1 0.03 0.46 25 -5.36 0 10 3.14 No 10 2.09 Yes 0 0 No -40 0.76 Yes 30 86.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 666357 - NR_033743 ATP5I 1 0.03 0.36 22 4 0 16 4.58 No 3 0.47 No 0 0 No -15 0.48 No 55 38.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 667756 - NR_033743 ATP5I 1 2688.37 1271.22 72 6.82 81.26 18 6.86 Yes 5 2.12 Yes 19 0.26 Yes -17 0.83 Yes 53 88.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 27107342 - NM_001003697 ATP5J 1 0.41 0.1 7 7.95 78.26 43 7.48 Yes 30 1.89 Yes 39 0.87 Yes -42 0.63 No 28 90.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 27107701 - NM_001003697 ATP5J 1 3.6 0.99 47 9.71 85.67 31 5.75 Yes 18 0.85 Yes 0 0 No -30 0.86 Yes 40 81.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99056887 - NM_001039178 ATP5J2 1 4736.2 1280.51 72 10.16 94.58 21 5.2 No 8 0.88 Yes 20 0.79 Yes -20 0.85 Yes 50 85.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 99056887 - NM_001039178 ATP5J2 1 3.05 0.82 36 10.16 94.58 21 5.2 No 8 0.88 Yes 20 0.79 Yes -20 0.85 Yes 50 85.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 99057811 - NM_001039178 ATP5J2 1 0.03 0.18 12 1.36 0 9 3.87 No 9 1.59 Yes 0 0 No -38 0.82 Yes 32 94.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99057847 - NM_001039178 ATP5J2 1 0.03 0.15 10 -6.24 0 18 4.24 No 67 0.15 No 24 0.18 Yes -17 0.71 Yes 53 40.74 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 99061833 - NM_001039178 ATP5J2 1 0.03 0.15 9 3.69 74.35 24 5.39 No 34 -2.76 No 0 0 No -22 0.44 No 47 52.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118274638 + NR_033759 ATP5L 1 55.56 5.31 71 9.46 85.07 41 6.77 Yes -1 0.55 No 34 0.07 Yes -40 0.82 Yes 30 79.66 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 118277459 + NR_033759 ATP5L 1 2.79 0.54 31 5.51 82.21 23 6.16 Yes 10 0.9 Yes 0 0 No -22 0.7 Yes 48 77.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118277459 + NR_033759 ATP5L 1 1.49 0.31 20 5.51 82.21 23 6.16 Yes 10 0.9 Yes 0 0 No -22 0.7 Yes 48 77.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118279684 + NR_033759 ATP5L 1 0.01 0.19 12 3.18 69.75 21 7.02 Yes 51 -4.32 No 23 0.82 Yes -33 0.29 No 39 28.48 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 118279718 + NR_033759 ATP5L 1 0.04 0.79 32 -1.22 0 27 6.17 Yes 14 0.09 No 0 0 No -27 0.78 Yes 43 83.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 35275961 - NM_001697 ATP5O 1 0.29 3.07 66 6.4 86.72 25 5.29 No 73 1.33 Yes 24 0.93 Yes -24 0.67 Yes 49 64.26 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr21 35276319 - NM_001697 ATP5O 1 0.01 0.19 9 2.68 0 10 4 No 52 0.77 No 0 0 No -34 0.64 No 36 45.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 35276344 - NM_001697 ATP5O 1 0.03 0.46 16 3.48 67.62 15 6.07 Yes 27 0.76 No 22 0.78 Yes -39 0.75 Yes 31 81.96 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 35278805 - NM_001697 ATP5O 1 0.1 1.43 53 8.62 86.54 15 5.42 No 2 1.43 Yes 25 0.66 Yes -19 0.45 No 52 51.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 35279099 - NM_001697 ATP5O 1 0.06 0.83 41 7.19 88.99 26 5.28 No 36 1.23 Yes 25 0.95 Yes -25 0.7 Yes 45 87.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 35281504 - NM_001697 ATP5O 1 0.01 0.1 7 -0.88 0 15 4.58 No 46 0.19 No 0 0 No -38 0.69 Yes 32 72.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 35281514 - NM_001697 ATP5O 1 0.01 0.15 9 -18.69 0 28 4.93 No 36 0.2 No 0 0 No -28 0.71 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 35284692 - NM_001697 ATP5O 1 0.08 0.54 29 4.64 0 16 4.55 No 48 2.18 Yes 0 0 No -56 0.56 No 14 79.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 35286813 - NM_001697 ATP5O 1 0.08 0.65 31 1.65 0 29 5.99 Yes 6 0.92 Yes 26 0.89 Yes -28 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 35286815 - NM_001697 ATP5O 1 0.03 0.22 13 -0.2 0 27 5.83 Yes 4 0.86 Yes 26 0.89 Yes -26 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 50788028 + NR_033761 ATP5S 1 1.4 0.25 17 7.66 91.98 20 5.17 No 0 0.95 Yes 20 0.56 Yes -25 0.45 No 46 58.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 50791264 + NR_033761 ATP5S 1 0.35 0.14 8 9.86 84.19 17 6.03 Yes 4 1.33 Yes 24 0.61 Yes -24 0.55 No 46 48.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 50791264 + NR_033761 ATP5S 1 2.97 1.1 44 9.86 84.19 17 6.03 Yes 4 1.33 Yes 24 0.61 Yes -24 0.55 No 46 48.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 50791538 + NR_033761 ATP5S 1 0.89 0.31 18 6.73 93.95 28 5.29 No 57 0.02 No 0 0 No -27 0.75 Yes 43 63.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 41942378 - NM_001320844 ATP5SL 1 661.34 93.43 72 9.33 92.28 27 5.19 No 14 1.39 Yes 26 0.93 Yes -26 0.73 Yes 44 74.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 41944003 - NM_001320844 ATP5SL 1 1.18 0.11 8 8.47 83.67 14 5.2 No 1 1.12 Yes 0 0 No -20 0.75 Yes 51 79.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153664033 + NM_001183 ATP6AP1 1 0.12 0.21 14 0.09 0 9 3.87 No 17 2.22 Yes 0 0 No -29 0.88 Yes 41 88.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 81590120 + NM_001017971 ATP6AP1L 1 5.98 0.39 19 10.67 98.91 31 5.29 No 50 0.31 No 0 0 No -30 0.85 Yes 40 83.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 81607613 + NM_001017971 ATP6AP1L 1 1.91 0.29 16 5.53 70.58 46 6.28 Yes 19 1.14 Yes 0 0 No -21 0.61 No 49 46.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 81608215 + NM_001017971 ATP6AP1L 1 4.62 0.67 32 11.26 90.72 27 6.03 Yes 76 -3.77 No 0 0 No -26 0.3 No 43 27.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 40449655 + NM_005765 ATP6AP2 1 0.2 0.47 22 10.17 98.32 41 7.68 Yes 28 1.67 Yes 0 0 No -40 0.78 Yes 30 91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 40456504 + NM_005765 ATP6AP2 1 0.11 0.28 17 0.03 0 61 6.72 Yes 52 0.91 Yes 0 0 No -30 0.79 Yes 40 72.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 40457920 + NM_005765 ATP6AP2 1 0.07 0.19 9 0.19 0 22 4.89 No 63 0.84 Yes 33 0.57 Yes -21 0.34 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 40458187 + NM_005765 ATP6AP2 1 0.16 0.6 31 9.75 89.53 23 4.2 No 71 -3.38 No 27 0.68 Yes -31 0.52 No 39 70.01 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 40458900 + NM_005765 ATP6AP2 1 0.03 0.1 7 -2.03 73.08 18 4.47 No 47 1.07 Yes 0 0 No -26 0.68 Yes 44 66.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 40460014 + NM_005765 ATP6AP2 1 0.07 0.21 12 -14.94 0 14 4.62 No -3 1.6 Yes 0 0 No -22 0.59 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 40460020 + NM_005765 ATP6AP2 1 0.13 0.42 23 2.92 0 16 4 No 3 1.55 Yes 0 0 No -28 0.53 No 48 52.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 40464815 + NM_005765 ATP6AP2 1 0.21 0.83 36 0 68.84 30 8.27 Yes 17 0.63 No 0 0 No -29 0.6 No 25 43.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40629656 + NM_005177 ATP6V0A1 1 1.5 0.72 36 2.8 83.31 19 5.57 Yes 26 1.78 Yes 29 0.77 Yes -29 0.58 No 41 71.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 40629674 + NM_005177 ATP6V0A1 1 0.55 0.28 16 -0.88 72.16 15 3.7 No 44 1.76 Yes 22 0.54 Yes -20 0.67 Yes 50 69.56 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 40629656 + NM_005177 ATP6V0A1 1 57.46 29.72 72 2.8 83.31 19 5.57 Yes 26 1.78 Yes 29 0.77 Yes -29 0.58 No 41 71.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 40629674 + NM_005177 ATP6V0A1 1 1.69 0.92 39 -0.88 72.16 15 3.7 No 44 1.76 Yes 22 0.54 Yes -20 0.67 Yes 50 69.56 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 40630944 + NM_005177 ATP6V0A1 1 0.67 0.69 32 3.84 88.76 18 6.93 Yes 5 1.07 Yes 27 0.69 Yes -27 0.6 No 43 77.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 40633284 + NM_005177 ATP6V0A1 1 0.23 0.21 13 4.56 83.69 24 5.1 No 11 2.03 Yes 21 0.4 Yes -53 0.6 No 17 83.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 40662076 + NM_005177 ATP6V0A1 1 0.3 0.28 16 8.58 94.1 23 7.34 Yes 48 0.67 No 22 0.58 Yes -22 0.64 No 48 61.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 40666561 + NM_005177 ATP6V0A1 1 0.88 0.53 28 6.7 79.2 28 5.2 No 15 0.16 No 0 0 No -25 0.69 Yes 45 55.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 40668789 + NM_005177 ATP6V0A1 1 5.67 3.31 67 10.48 89.46 28 6.32 Yes 15 1.35 Yes 0 0 No -27 0.96 Yes 43 95.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40671509 + NM_005177 ATP6V0A1 1 0.53 0.28 15 6.9 77.64 29 4.7 No 50 1.05 Yes 0 0 No -27 0.28 No 52 45.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 124209203 + NM_012463 ATP6V0A2 1 0.4 0.33 23 -8.18 80.38 22 5.65 Yes 9 1.42 Yes 0 0 No -26 0.55 No 44 71.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 124209206 + NM_012463 ATP6V0A2 1 0.64 0.54 29 -2.49 0 9 3.87 No 12 1.43 Yes 0 0 No -29 0.59 No 41 65.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 124212298 + NM_012463 ATP6V0A2 1 0.48 0.35 21 7.09 91.05 18 4.96 No 5 1.02 Yes 28 0.78 Yes -31 0.59 No 39 63.38 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 124220439 + NM_012463 ATP6V0A2 1 0.56 0.57 27 10.25 95.1 20 7.3 Yes 7 1.32 Yes 0 0 No -19 0.7 Yes 51 67.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 124220443 + NM_012463 ATP6V0A2 1 0.29 0.26 18 3.74 0 24 7.54 Yes 11 1.31 Yes 0 0 No -23 0.79 Yes 47 68.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 124228333 + NM_012463 ATP6V0A2 1 0.2 0.11 8 -16.53 65.06 33 6.56 Yes 20 0.91 Yes 0 0 No -32 0.65 No 38 83.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 124228335 + NM_012463 ATP6V0A2 1 0.23 0.13 7 -19.96 0 35 6.71 Yes 22 0.9 Yes 0 0 No -34 0.64 No 36 83.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 124233130 + NM_012463 ATP6V0A2 1 0.15 0.13 8 -0.41 0 12 4.24 No 36 1.38 Yes 0 0 No -31 0.84 Yes 39 86.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124241344 + NM_012463 ATP6V0A2 1 0.22 0.13 8 0.35 81.02 21 4.79 No -2 0.42 No 27 0.52 Yes -23 0.41 No 50 32.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 124242478 + NM_012463 ATP6V0A2 1 1.12 0.65 34 3.06 0 30 7.92 Yes 17 0.85 Yes 0 0 No -29 0.69 Yes 41 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 44441336 + NM_001294333 ATP6V0B 1 0.17 0.36 24 2.68 80.26 24 5 No 11 0.39 No 23 0.96 Yes -23 0.87 Yes 47 84.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 44441954 + NM_001294333 ATP6V0B 1 0.05 0.18 12 3.07 77.86 24 5.29 No 11 0.71 No 24 0.97 Yes -23 0.56 No 49 72.35 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 44443652 + NM_001294333 ATP6V0B 1 0.09 0.22 14 11.79 94.53 25 9.26 Yes 35 1.81 Yes 24 0.91 Yes -24 0.83 Yes 46 87.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2569507 + NM_001694 ATP6V0C 1 0.14 0.68 33 5.98 81.95 32 8.06 Yes 19 1.56 Yes 0 0 No -31 0.87 Yes 39 90.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2569521 + NM_001694 ATP6V0C 1 0.04 0.19 10 -2.09 70.63 11 4.8 No 33 1.55 Yes 0 0 No -45 0.85 Yes 25 89.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67472527 - NM_004691 ATP6V0D1 1 0.06 0.14 9 4.2 69.18 40 6.48 Yes 27 1 Yes 0 0 No -29 0.6 No 31 51.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67472999 - NM_004691 ATP6V0D1 1 0.99 3.18 67 5.24 88.32 23 5.37 No 16 0.5 No 22 0.77 Yes -25 0.58 No 42 71.78 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 67473050 - NM_004691 ATP6V0D1 1 0.04 0.11 8 -15.66 0 59 8.94 Yes 46 2.09 Yes 0 0 No -58 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67477079 - NM_004691 ATP6V0D1 1 0.04 0.13 8 -2.33 0 24 6.99 Yes 11 0.81 Yes 0 0 No -23 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 67486264 - NM_004691 ATP6V0D1 1 0.19 0.43 25 2.8 83.94 18 4.77 No 71 1.37 Yes 22 0.89 Yes -22 0.94 Yes 48 71.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67486330 - NM_004691 ATP6V0D1 1 0.13 0.29 18 8.08 86.22 18 6.71 Yes 5 1.43 Yes 26 0.4 Yes -26 0.8 Yes 53 47.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 67491555 - NM_004691 ATP6V0D1 1 0.19 0.49 25 9.85 82.31 28 6.76 Yes 15 0.81 Yes 27 0.86 Yes -27 0.95 Yes 43 92.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 172411134 + NM_003945 ATP6V0E1 1 0.09 0.46 26 9.1 86.72 34 7 Yes 68 -1.29 No 0 0 No -20 0.42 No 46 48.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 172413698 + NM_003945 ATP6V0E1 1 0.49 2.5 57 8.05 84.98 17 5.48 No 70 0.43 No 0 0 No -23 0.91 Yes 47 90.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 149573061 + NR_110612 ATP6V0E2 1 0.43 0.15 10 1.09 76.69 26 5.01 No 38 0.42 No 25 0.94 Yes -25 0.82 Yes 51 51.29 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 113487323 + NM_001690 ATP6V1A 1 0.65 0.96 42 7.44 79.13 36 6.48 Yes 23 0.87 Yes 0 0 No -35 0.94 Yes 35 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 113497615 + NM_001690 ATP6V1A 1 0.26 0.33 17 3.4 72.53 21 6.08 Yes 43 1.05 Yes 20 0.8 Yes -20 0.61 No 50 80.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 113499578 + NM_001690 ATP6V1A 1 1.14 2.33 61 7.13 77.64 25 5.34 No 12 0.15 No 24 0.77 Yes -24 0.52 No 45 49.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 113517157 + NM_001690 ATP6V1A 1 0.18 0.35 21 3.41 72.83 38 5.49 No 25 0.57 No 0 0 No -37 0.53 No 33 71.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 113517157 + NM_001690 ATP6V1A 1 0.09 0.18 12 3.41 72.83 38 5.49 No 25 0.57 No 0 0 No -37 0.53 No 33 71.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 20066944 + NM_001693 ATP6V1B2 1 0.04 0.11 7 -7.03 0 25 8.11 Yes 12 1.4 Yes 23 0.78 Yes -24 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 20073925 + NM_001693 ATP6V1B2 1 0.1 0.19 12 -10.86 0 27 6.72 Yes 14 0.73 No 0 0 No -27 0.84 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 104069776 + NM_001695 ATP6V1C1 1 0.74 0.72 38 7.26 78.69 22 5.29 No 27 -1.1 No 0 0 No -21 0.81 Yes 49 85.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 67820677 - NM_015994 ATP6V1D 1 0.34 0.47 25 9.12 88.92 28 5.99 Yes 62 -3.22 No 27 0.69 Yes -26 0.67 Yes 46 56.36 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 18081223 - NM_001696 ATP6V1E1 1 0.1 0.39 22 9.36 84.32 38 6.48 Yes 25 0.82 Yes 0 0 No -37 0.69 Yes 42 65.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 18090385 - NM_001696 ATP6V1E1 1 0.03 0.14 8 7.78 88.7 25 5.27 No -3 0.35 No 0 0 No -25 0.59 No 45 45.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 18101894 - NM_001696 ATP6V1E1 1 0.03 0.11 7 3.14 79.63 17 5.29 No 4 1.13 Yes 21 0.55 Yes -21 0.38 No 54 60.76 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 46764716 - NM_001318063 ATP6V1E2 1 3.04 0.26 16 6.81 76.82 39 6.48 Yes 26 0.57 No 38 0.44 Yes -38 0.92 Yes 32 92.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 54665030 - NM_213620 ATP6V1H 1 0.4 0.44 22 6.86 89.14 23 6.25 Yes 10 1.91 Yes 0 0 No -22 0.84 Yes 48 87.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 54698938 - NM_213620 ATP6V1H 1 0.59 0.89 38 9.6 90.8 21 7.62 Yes 8 1.35 Yes 0 0 No -20 0.88 Yes 50 90.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 54719419 - NM_213620 ATP6V1H 1 0.81 0.89 42 8.88 90.49 24 6.24 Yes 11 0.43 No 23 0.7 Yes -23 0.7 Yes 47 79.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 54729352 - NM_213620 ATP6V1H 1 0.14 0.15 10 1.84 83.95 26 7.42 Yes 32 1.04 Yes 0 0 No -26 0.7 Yes 44 73.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 54739936 - NM_213620 ATP6V1H 1 0.09 0.13 7 2.87 0 40 5.97 Yes 42 1.08 Yes 0 0 No -36 0.35 No 31 41.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 54752280 - NM_213620 ATP6V1H 1 0.17 0.13 9 3.71 76.29 14 5.31 No 1 1.18 Yes 0 0 No -22 0.88 Yes 48 83.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77230241 + NM_000052 ATP7A 1 1.7 1.01 41 8.16 84.08 24 5.71 Yes 46 0.43 No 0 0 No -20 0.72 Yes 50 68.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 77231006 + NM_000052 ATP7A 1 0.91 0.6 27 12.22 88.27 32 7.66 Yes 19 1.59 Yes 0 0 No -31 0.94 Yes 39 96.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77232416 + NM_000052 ATP7A 1 0.28 0.17 11 2.59 72.31 53 7.31 Yes 13 1.07 Yes 0 0 No -25 0.95 Yes 45 89.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77254058 + NM_000052 ATP7A 1 3.46 1.67 51 2.16 82.02 19 7.43 Yes 6 0.88 Yes 0 0 No -23 0.59 No 47 59.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 77257763 + NM_000052 ATP7A 1 0.3 0.13 9 10.07 88.27 32 6.56 Yes 19 1.45 Yes 0 0 No -31 0.93 Yes 39 95.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77300998 + NM_000052 ATP7A 1 0.53 0.17 11 7.8 87.19 25 5.54 No 43 1.53 Yes 0 0 No -34 0.78 Yes 36 86.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42457395 - NM_001105529 ATP8A1 1 0.09 0.15 11 -7.44 65.26 37 6.31 Yes 7 -1.92 No 0 0 No -36 0.47 No 34 66.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42457451 - NM_001105529 ATP8A1 1 0.55 0.89 39 1.49 59.58 41 4.99 No 21 1.12 Yes 33 0.67 Yes -33 0.79 Yes 37 43.05 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 42486118 - NM_001105529 ATP8A1 1 0.13 0.14 10 5.53 80.32 28 6.41 Yes 2 1.2 Yes 0 0 No -27 0.52 No 43 79.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 42486190 - NM_001105529 ATP8A1 1 1.7 1.56 54 7.77 89.78 51 5.89 Yes 14 1.38 Yes 0 0 No -26 0.94 Yes 44 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42504842 - NM_001105529 ATP8A1 1 2.27 2.64 62 6.35 86.32 24 5.1 No 55 -3.62 No 0 0 No -23 0.47 No 46 40.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42517128 - NM_001105529 ATP8A1 1 0.26 0.54 29 5.51 71.17 38 6.08 Yes -3 1.12 Yes 0 0 No -37 0.71 Yes 33 75.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42523584 - NM_001105529 ATP8A1 1 0.21 0.39 20 10 88.9 28 4.35 No 6 0.71 No 0 0 No -27 0.48 No 43 65.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42524285 - NM_001105529 ATP8A1 1 0.07 0.1 7 -2.19 66 28 5.62 Yes 40 0.71 No 0 0 No -27 0.49 No 43 55.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42524310 - NM_001105529 ATP8A1 1 0.25 0.38 18 -3.84 0 10 4 No 15 0.7 No 0 0 No -27 0.71 Yes 43 80.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 42527997 - NM_001105529 ATP8A1 1 0.14 0.26 16 9 91.58 18 4.45 No 5 0.68 No 0 0 No -24 0.88 Yes 46 92.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 42532980 - NM_001105529 ATP8A1 1 0.44 0.86 38 4.57 78.54 32 4.92 No 31 0.93 Yes 0 0 No -31 0.73 Yes 39 71.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42550129 - NM_001105529 ATP8A1 1 0.12 0.22 14 7.79 88 28 6.11 Yes 15 0.83 Yes 0 0 No -27 0.79 Yes 43 84.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42550861 - NM_001105529 ATP8A1 1 0.08 0.15 9 8.62 80.44 30 5.98 Yes 52 0.66 No 0 0 No -29 0.66 No 46 66.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42558054 - NM_001105529 ATP8A1 1 0.31 0.35 23 2.56 0 38 6.29 Yes 25 0.4 No 0 0 No -27 0.71 Yes 43 72.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 42562207 - NM_001105529 ATP8A1 1 0.28 0.32 21 11.02 94.1 33 7.11 Yes 20 0.85 Yes 0 0 No -32 0.9 Yes 38 87.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42565796 - NM_001105529 ATP8A1 1 0.37 0.47 25 10.11 86.25 27 6.04 Yes 14 0.39 No 0 0 No -26 0.86 Yes 44 88.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 42571223 - NM_001105529 ATP8A1 1 3.33 3.85 69 6.47 77.65 44 7.7 Yes 31 1.16 Yes 43 0.44 Yes -43 0.57 No 27 82.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 42577689 - NM_001105529 ATP8A1 1 0.06 0.13 9 6.38 76.2 32 5.85 Yes 69 1 Yes 0 0 No -21 0.79 Yes 49 66.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 42581881 - NM_001105529 ATP8A1 1 0.4 0.81 37 4.74 77.02 35 7.24 Yes 40 0.47 No 0 0 No -34 0.62 No 36 64.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42585899 - NM_001105529 ATP8A1 1 2.14 3.29 64 7.39 79.16 27 5.1 No 14 1.45 Yes 0 0 No -26 0.89 Yes 44 91.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42592902 - NM_001105529 ATP8A1 1 0.22 0.33 21 2.77 65.71 47 8.9 Yes 34 0.57 No 24 0.67 Yes -46 0.61 No 24 46.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 42592902 - NM_001105529 ATP8A1 1 2.43 3.36 66 2.77 65.71 47 8.9 Yes 34 0.57 No 24 0.67 Yes -46 0.61 No 24 46.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 42601929 - NM_001105529 ATP8A1 1 0.15 0.15 10 5.87 92.41 24 3.91 No 72 0.55 No 0 0 No -23 0.65 No 51 64.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42601946 - NM_001105529 ATP8A1 1 0.09 0.1 7 4.85 78.02 16 4.78 No 55 0.52 No 0 0 No -20 0.34 No 47 65.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42613260 - NM_001105529 ATP8A1 1 0.88 1.13 28 11.39 88.2 27 6.12 Yes 8 1.42 Yes 0 0 No -26 0.87 Yes 44 86.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42626588 - NM_001105529 ATP8A1 1 0.07 0.14 10 9 82.7 34 5.99 Yes 42 1.25 Yes 0 0 No -29 0.63 No 42 52.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 42626588 - NM_001105529 ATP8A1 1 0.09 0.18 10 9 82.7 34 5.99 Yes 42 1.25 Yes 0 0 No -29 0.63 No 42 52.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 42629140 - NM_001105529 ATP8A1 1 0.19 0.13 8 -2.8 57.52 53 5 No 65 0.65 No 22 0.55 Yes -30 0.42 No 40 34.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 42629143 - NM_001105529 ATP8A1 1 0.17 0.1 7 -0.58 69.08 50 4.87 No 62 0.65 No 22 0.55 Yes -27 0.51 No 43 65.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 154301661 + NM_020452 ATP8B2 1 0.31 0.17 9 9.49 87.34 14 6.4 Yes 32 1.45 Yes 0 0 No -22 0.53 No 47 51.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154302800 + NM_020452 ATP8B2 1 1.8 0.64 31 0.1 58.09 35 6.77 Yes 43 1.35 Yes 0 0 No -27 0.63 No 36 75.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 154303292 + NM_020452 ATP8B2 1 0.16 0.14 9 -13.1 67.18 28 6.53 Yes 15 0.94 Yes 0 0 No -27 0.92 Yes 43 93.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154303356 + NM_020452 ATP8B2 1 0.45 0.29 18 4.24 77.77 31 7.14 Yes 18 1.91 Yes 0 0 No -30 0.95 Yes 40 94.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154304053 + NM_020452 ATP8B2 1 0.13 0.14 8 2.16 0 13 4.36 No 68 -3.96 No 32 0.94 Yes -24 0.73 Yes 49 41.91 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 154304416 + NM_020452 ATP8B2 1 0.1 0.1 7 3.58 67.02 22 5.92 Yes 71 -3.64 No 18 0.93 Yes -20 0.67 Yes 50 69.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154316597 + NM_020452 ATP8B2 1 0.26 0.21 10 6.23 84.74 23 6 Yes 10 0.72 No 23 0.5 Yes -22 0.97 Yes 48 94.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154316642 + NM_020452 ATP8B2 1 0.14 0.11 7 -8.1 62.36 27 5.7 Yes 55 0.72 No 0 0 No -26 0.75 Yes 23 44.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 154316848 + NM_020452 ATP8B2 1 1.52 0.96 40 7.18 70.26 25 6.32 Yes 12 1.62 Yes 24 0.66 Yes -24 0.77 Yes 46 92.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154317355 + NM_020452 ATP8B2 1 0.19 0.13 8 7.03 84.03 18 6.43 Yes 5 1.21 Yes 0 0 No -28 0.6 No 40 62.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154317429 + NM_020452 ATP8B2 1 0.25 0.13 7 1.46 84.24 23 4.8 No 64 -4.29 No 19 0.69 Yes -18 0.51 No 52 62.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 76837981 + NM_001306085 ATP9B 1 4.37 1.15 45 7.18 76.97 22 6.59 Yes 9 0.65 No 21 0.49 Yes -26 0.41 No 43 42.69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 76867053 + NM_001306085 ATP9B 1 0.27 0.1 7 6.16 79.24 46 6.79 Yes 3 1.67 Yes 0 0 No -31 0.76 Yes 39 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 76869586 + NM_001306085 ATP9B 1 0.43 0.18 9 10.11 85.05 30 6 Yes 17 1.11 Yes 0 0 No -29 0.86 Yes 41 89.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 76873286 + NM_001306085 ATP9B 1 0.87 0.44 21 4.76 81.32 29 5.52 No 55 0.99 Yes 21 0.37 Yes -28 0.72 Yes 42 77.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 76874993 + NM_001306085 ATP9B 1 10.95 5.76 72 9.45 86.08 57 5.79 Yes 60 1.43 Yes 24 0.91 Yes -24 0.78 Yes 46 85.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 76916888 + NM_001306085 ATP9B 1 0.4 0.11 8 4.76 80.66 25 4.51 No 16 1.31 Yes 0 0 No -24 0.74 Yes 46 78.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 76933701 + NM_001306085 ATP9B 1 0.4 0.14 8 9.8 88.46 26 9.47 Yes 13 1.36 Yes 25 0.74 Yes -25 0.78 Yes 41 75.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 76954385 + NM_001306085 ATP9B 1 0.25 0.1 7 -0.79 59.71 74 7.43 Yes 61 0.48 No 27 0.82 Yes -27 0.67 Yes 43 72.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 76964747 + NM_001306085 ATP9B 1 0.78 0.35 23 5.33 96.47 23 3.91 No 40 -1.48 No 0 0 No -21 0.88 Yes 49 90.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 76966940 + NM_001306085 ATP9B 1 0.31 0.13 7 -4.43 0 38 7.39 Yes 25 1.18 Yes 18 0.6 Yes -37 0.87 Yes 33 94.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 76969547 + NM_001306085 ATP9B 1 0.6 0.22 12 7.61 80.83 27 5.29 No 14 1.12 Yes 26 0.84 Yes -26 0.77 Yes 44 79.71 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 76969650 + NM_001306085 ATP9B 1 0.42 0.13 9 7.74 80.97 46 7.68 Yes 33 1.07 Yes 0 0 No -32 0.45 No 38 45.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 77021407 + NM_001306085 ATP9B 1 1.51 0.43 26 0.22 76.19 29 4.27 No 7 0.56 No 0 0 No -28 0.89 Yes 42 61.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 77036104 + NM_001306085 ATP9B 1 2.5 0.71 32 11.06 93.92 28 5.83 Yes 74 0.11 No 0 0 No -22 0.53 No 42 63.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 77092827 + NM_001306085 ATP9B 1 0.45 0.11 7 3.75 69.65 42 6.33 Yes 29 1.24 Yes 35 0.65 Yes -47 0.59 No 23 78.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr18 77097200 + NM_001306085 ATP9B 1 4.47 1.08 44 12.87 83.86 23 5.74 Yes 10 1.08 Yes 0 0 No -22 0.91 Yes 48 83.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 77097316 + NM_001306085 ATP9B 1 0.45 0.13 9 -0.4 0 15 4.58 No 13 -0.93 No 25 0.87 Yes -14 0.34 No 56 21.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 77119971 + NM_001306085 ATP9B 1 0.73 0.17 10 11.95 80.04 19 4.45 No 6 0.83 Yes 0 0 No -28 0.5 No 49 49.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 77130729 + NM_001306085 ATP9B 1 0.51 0.1 7 4.3 72.79 124 10.64 Yes 67 1.61 Yes 0 0 No -40 0.72 Yes 30 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 77135393 + NM_001306085 ATP9B 1 30.17 6.71 72 8.57 84.51 39 9.09 Yes 56 1.76 Yes 38 0.68 Yes -38 0.6 No 32 87.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 47108974 - NM_001042546 ATPAF1 1 1.11 0.26 12 7.98 86.64 21 4.76 No 29 0.76 No 20 0.8 Yes -20 0.7 Yes 50 57.3 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 47110929 - NM_001042546 ATPAF1 1 764.33 168.96 72 7.94 88.44 45 6.37 Yes 19 0.68 No 31 0.83 Yes -31 0.91 Yes 39 93.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 47124406 - NM_001042546 ATPAF1 1 0.12 0.15 10 2.77 0 28 6 Yes 15 0.74 No 23 0.66 Yes -27 0.81 Yes 43 83.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 47129596 - NM_001042546 ATPAF1 1 0.8 1.04 41 4.22 69.58 94 8.66 Yes 29 0.44 No 31 0.83 Yes -31 0.72 Yes 39 60.18 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 17924313 - NM_145691 ATPAF2 1 0.32 0.11 8 6.96 79.67 39 6.19 Yes 45 0.68 No 21 0.41 Yes -34 0.79 Yes 36 84.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17924887 - NM_145691 ATPAF2 1 0.49 0.14 7 4.86 78.08 28 5.38 No 15 1.22 Yes 0 0 No -27 0.6 No 49 75.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 17924978 - NM_145691 ATPAF2 1 3.94 1.17 51 9.69 87.94 25 5.48 No 12 1.1 Yes 24 0.91 Yes -24 0.84 Yes 46 84.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17925187 - NM_145691 ATPAF2 1 0.2 0.1 7 -9.76 0 18 4.47 No 60 0.68 No 24 0.38 Yes -17 0.74 Yes 53 43.05 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 17927739 - NM_145691 ATPAF2 1 0.45 0.22 13 4.34 76.14 15 5.38 No 35 -3.76 No 0 0 No -19 0.42 No 51 71.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 17928740 - NM_145691 ATPAF2 1 0.36 0.17 10 -0.85 73.71 37 5.29 No 17 1.53 Yes 0 0 No -32 0.94 Yes 38 94.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28562852 + NM_178191 ATPIF1 1 0.03 0.24 15 6.29 78.24 26 7.13 Yes 61 -1.56 No 24 0.93 Yes -25 0.81 Yes 45 86.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 142169394 - NM_001184 ATR 1 0.44 0.38 17 3.64 83.63 23 4.78 No 75 1.9 Yes 0 0 No -22 0.81 Yes 48 85.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 142169445 - NM_001184 ATR 1 2.29 1.9 58 4.51 73.82 56 8.38 Yes 24 1.94 Yes 36 0.87 Yes -36 0.7 Yes 34 68.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 142176582 - NM_001184 ATR 1 0.43 0.19 13 -5.82 0 19 4.58 No 41 0.06 No 25 0.63 Yes -18 0.43 No 17 44.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 142177948 - NM_001184 ATR 1 0.46 0.24 11 -1.23 0 9 3.87 No 73 0.51 No 0 0 No -28 0.94 Yes 42 95.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142191059 - NM_001184 ATR 1 0.85 0.49 28 6.72 83.43 33 6 Yes 20 0.08 No 0 0 No -32 0.67 Yes 38 64.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 142193508 - NM_001184 ATR 1 1.45 0.79 35 9.1 94.82 23 5.68 Yes 10 0.09 No 0 0 No -22 0.92 Yes 48 93.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142200084 - NM_001184 ATR 1 0.28 0.17 10 1.9 61.55 33 6.82 Yes 56 0.19 No 0 0 No -32 0.66 No 38 67.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 142200134 - NM_001184 ATR 1 0.31 0.18 9 8.13 77.78 19 6.21 Yes 6 0.22 No 0 0 No -21 0.56 No 49 72.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 142203718 - NM_001184 ATR 1 0.3 0.17 11 3.27 68.81 35 7.78 Yes 22 1.5 Yes 0 0 No -34 0.95 Yes 36 95.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 142204173 - NM_001184 ATR 1 0.55 0.36 20 4.99 88.99 28 7.32 Yes 15 1.73 Yes 0 0 No -27 0.9 Yes 43 87.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 142241690 - NM_001184 ATR 1 1.13 0.74 33 4.8 0 30 6.17 Yes 65 -4.01 No 35 0.53 Yes -29 0.49 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 142259824 - NM_001184 ATR 1 0.32 0.24 14 -0.16 64.27 21 4.88 No 26 0.77 No 0 0 No -20 0.7 Yes 50 75.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142266616 - NM_001184 ATR 1 1.77 1.38 45 5.56 83.51 35 6.72 Yes 0 0.67 No 0 0 No -34 0.73 Yes 36 83.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142268353 - NM_001184 ATR 1 0.21 0.22 13 6.29 79.47 53 6.02 Yes 12 0.5 No 0 0 No -24 0.9 Yes 46 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142273597 - NM_001184 ATR 1 0.32 0.19 12 5.96 79.84 20 5.57 Yes 7 0.89 Yes 0 0 No -19 0.5 No 51 86.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 142275410 - NM_001184 ATR 1 0.12 0.13 8 0.61 0 11 4.12 No 15 0.25 No 0 0 No -27 0.73 Yes 43 79.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142278271 - NM_001184 ATR 1 0.59 0.47 23 3.37 75.61 21 4.69 No 51 0.4 No 0 0 No -20 0.85 Yes 50 85.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142280239 - NM_001184 ATR 1 0.5 0.5 24 3.79 81.57 28 5.83 Yes 15 0.5 No 0 0 No -27 0.83 Yes 43 51.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 142283469 - NM_001184 ATR 1 0.6 0.44 25 8.86 91.75 84 7.83 Yes 68 0.68 No 0 0 No -23 0.43 No 43 46.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 142285036 - NM_001184 ATR 1 0.1 0.1 7 5.58 84.91 42 6.15 Yes 72 0.35 No 0 0 No -30 0.46 No 35 68.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 142285095 - NM_001184 ATR 1 0.21 0.19 13 0.67 0 12 4.24 No 13 0.36 No 0 0 No -31 0.4 No 39 52.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27438465 + NM_016085 ATRAID 1 0.04 0.14 7 -4.57 0 27 4.19 No 57 -4.65 No 25 0.63 Yes -26 0.64 No 52 41.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 48500761 + NM_001271022 ATRIP 1 0.33 0.15 9 -1.14 0 36 5 No 45 1.13 Yes 0 0 No -27 0.73 Yes 43 66.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 48501573 + NM_001271022 ATRIP 1 0.27 0.11 7 7.35 88.21 22 5.41 No 9 0.61 No 0 0 No -24 0.97 Yes 46 97.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48502759 + NM_001271022 ATRIP 1 1.78 0.6 32 5.44 79.8 29 4.97 No 16 0.37 No 0 0 No -25 0.78 Yes 45 73.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48505442 + NM_001271022 ATRIP 1 5.99 1.56 55 4.42 79.82 30 4.52 No 17 0.56 No 0 0 No -25 0.89 Yes 45 81.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48506887 + NM_001271022 ATRIP 1 0.57 0.18 13 0.15 86.07 30 5.74 Yes 17 1.48 Yes 0 0 No -29 0.92 Yes 41 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3517408 + NM_139321 ATRN 1 0.71 0.22 14 5.84 85.92 46 5.53 No 0 0.92 Yes 0 0 No -27 0.77 Yes 43 85.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3557519 + NM_139321 ATRN 1 0.41 0.17 8 8.31 84.57 17 4.8 No 57 1.09 Yes 0 0 No -26 0.3 No 44 32.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 3559325 + NM_139321 ATRN 1 1.53 0.47 27 7.01 78.62 14 4.41 No 1 0.94 Yes 0 0 No -20 0.45 No 48 58.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 3596474 + NM_139321 ATRN 1 119.17 18.13 72 9.95 83.82 25 6.71 Yes 12 0.88 Yes 24 0.78 Yes -24 0.69 Yes 46 85.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 3615000 + NM_139321 ATRN 1 1.03 0.18 12 4.03 69.12 48 7.21 Yes 35 1.33 Yes 0 0 No -47 0.95 Yes 23 98.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3615707 + NM_139321 ATRN 1 1.08 0.17 9 7.25 79.03 64 7.88 Yes 67 -3.91 No 0 0 No -28 0.54 No 42 51.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 76786782 - NM_000489 ATRX 1 0.11 0.15 9 9.08 88.97 32 6.08 Yes 19 1.07 Yes 0 0 No -31 0.82 Yes 39 86.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 76831219 - NM_000489 ATRX 1 0.99 0.71 31 10.52 91.9 19 5.9 Yes 6 1.13 Yes 0 0 No -31 0.62 No 52 39.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 76849254 - NM_000489 ATRX 1 0.55 0.51 25 3.56 0 16 4.58 No 76 0.68 No 0 0 No -18 0.28 No 52 61.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 76851256 - NM_000489 ATRX 1 4.99 4.31 67 6.9 83.23 27 6.25 Yes 14 0.83 Yes 0 0 No -26 0.9 Yes 44 87.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 76856033 - NM_000489 ATRX 1 0.11 0.1 7 -5.62 0 22 6.87 Yes 9 1.14 Yes 0 0 No -21 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 76871980 - NM_000489 ATRX 1 2.37 1.72 51 11.68 91.48 25 4.74 No 69 0.81 Yes 24 0.94 Yes -24 0.94 Yes 46 92.85 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 76890010 - NM_000489 ATRX 1 0.92 1.01 42 8.39 90.74 29 7.37 Yes 16 0.12 No 0 0 No -28 0.52 No 46 43.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 76907568 - NM_000489 ATRX 1 0.27 0.14 7 11.1 85.89 30 6.01 Yes 21 1.53 Yes 0 0 No -29 0.73 Yes 41 87.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 76924084 - NM_000489 ATRX 1 0.23 0.19 13 14.16 90.96 94 6.56 Yes 43 0.34 No 0 0 No -43 0.39 No 29 81.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 76944418 - NM_000489 ATRX 1 21.73 15.08 72 4.17 78.91 25 5.34 No 53 1.19 Yes 0 0 No -22 0.48 No 46 60.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 76944418 - NM_000489 ATRX 1 14.92 10.25 72 4.17 78.91 25 5.34 No 53 1.19 Yes 0 0 No -22 0.48 No 46 60.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 76946419 - NM_000489 ATRX 1 0.17 0.11 7 7.28 71.53 36 6.31 Yes 1 1.14 Yes 21 0.48 Yes -21 0.49 No 35 51.96 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 76949421 - NM_000489 ATRX 1 0.37 0.47 24 -3.45 0 14 3.87 No 21 0.88 Yes 0 0 No -33 0.62 No 37 60.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 76950727 - NM_000489 ATRX 1 0.22 0.26 16 4.75 86.86 25 3.95 No 41 1.29 Yes 0 0 No -25 0.85 Yes 45 87.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 76955036 - NM_000489 ATRX 1 1.63 1.33 45 6.8 89.3 34 5.91 Yes 51 1.5 Yes 0 0 No -34 0.61 No 42 58.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 76991484 - NM_000489 ATRX 1 0.19 0.13 9 6.24 88.76 29 5.92 Yes 61 0.89 Yes 0 0 No -28 0.71 Yes 42 76.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77023832 - NM_000489 ATRX 1 0.2 0.14 7 8.06 85.05 44 6.46 Yes 34 0.54 No 0 0 No -39 0.36 No 32 72.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 16307043 - NM_000332 ATXN1 1 1.26 0.18 8 8.79 86.24 21 5.74 Yes 26 0.09 No 0 0 No -26 0.76 Yes 44 74.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 16409525 - NM_000332 ATXN1 1 1.69 0.89 32 9.81 85.86 22 5.59 Yes 9 0.37 No 0 0 No -21 0.63 No 45 72.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 16433328 - NM_000332 ATXN1 1 2.01 0.85 40 11 76.27 40 6.25 Yes 1 1.78 Yes 27 0.74 Yes -27 0.85 Yes 43 76.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 16480382 - NM_000332 ATXN1 1 1.51 0.74 33 13.13 95.65 38 6.23 Yes 71 -1.82 No 0 0 No -32 0.45 No 42 60.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 16498051 - NM_000332 ATXN1 1 2.77 0.85 43 8.25 89.5 14 6.25 Yes 40 1.73 Yes 0 0 No -23 0.76 Yes 47 82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 16550662 - NM_000332 ATXN1 1 0.35 0.11 7 10.08 86.12 28 6.19 Yes 69 1.07 Yes 0 0 No -25 0.31 No 40 41.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 16558525 - NM_000332 ATXN1 1 0.84 0.29 19 9.41 96.76 40 8.42 Yes 27 1.74 Yes 0 0 No -39 0.93 Yes 31 97.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 16611086 - NM_000332 ATXN1 1 0.52 0.24 12 11.32 88.27 29 7.21 Yes 16 2.17 Yes 0 0 No -28 0.91 Yes 42 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 16616351 - NM_000332 ATXN1 1 2.63 1.14 42 8.31 91.41 20 5.38 No 7 1.12 Yes 0 0 No -28 0.66 No 42 81.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 16618950 - NM_000332 ATXN1 1 1.48 0.65 31 3.97 84.41 26 6.08 Yes 13 0.77 Yes 0 0 No -25 0.73 Yes 45 52.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 16645589 - NM_000332 ATXN1 1 0.37 0.15 9 8.72 87.11 13 5.58 Yes 0 1.01 Yes 0 0 No -22 0.4 No 48 63.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 16646283 - NM_000332 ATXN1 1 0.24 0.1 7 8.54 88.27 23 6.44 Yes 10 0.92 Yes 0 0 No -22 0.97 Yes 48 96.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 16655892 - NM_000332 ATXN1 1 1.95 0.74 37 7.37 93.7 36 5.42 No 43 0.58 No 0 0 No -30 0.57 No 35 70.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 16740150 - NM_000332 ATXN1 1 59.83 15.65 72 10.2 94.37 21 5.2 No 20 0.26 No 20 0.75 Yes -20 0.78 Yes 50 80.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 16740846 - NM_000332 ATXN1 1 2.56 0.74 31 7.11 92.35 16 4.57 No 3 0.55 No 0 0 No -26 0.46 No 45 63.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 46089640 + NM_013236 ATXN10 1 0.05 0.31 18 8.37 83.35 17 5.15 No 4 0.54 No 0 0 No -26 0.29 No 39 30.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 46097108 + NM_013236 ATXN10 1 0.02 0.17 11 8.19 75 42 8.17 Yes 29 0.56 No 0 0 No -30 0.68 Yes 40 71.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 46098565 + NM_013236 ATXN10 1 0.16 1.1 45 -1.74 0 23 8.83 Yes 10 1.4 Yes 25 0.95 Yes -22 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 46098646 + NM_013236 ATXN10 1 0.07 0.47 26 -0.1 67.52 30 7.95 Yes 17 0.74 No 0 0 No -33 0.68 Yes 37 72.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 46099745 + NM_013236 ATXN10 1 0.06 0.43 25 4.42 78.42 23 5.1 No 10 0.02 No 0 0 No -22 0.96 Yes 48 98.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 46103064 + NM_013236 ATXN10 1 0.02 0.11 8 3.63 79.41 52 8.63 Yes 39 0.58 No 0 0 No -34 0.5 No 37 61.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 46108998 + NM_013236 ATXN10 1 0.02 0.15 9 7.75 77.71 45 6.92 Yes 5 1.28 Yes 0 0 No -34 0.82 Yes 32 63.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 46132847 + NM_013236 ATXN10 1 1.22 5.33 72 7.17 71.23 30 4.9 No 0 1.2 Yes 0 0 No -29 0.66 Yes 41 51.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 46136229 + NM_013236 ATXN10 1 0.06 0.22 13 -1.51 53.75 28 5.62 Yes 15 0.79 Yes 22 0.37 Yes -27 0.84 Yes 43 79.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 46207577 + NM_013236 ATXN10 1 0.04 0.21 12 8.44 83.44 23 5.77 Yes 10 0.68 No 30 0.7 Yes -30 0.74 Yes 40 81.34 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 46238822 + NM_013236 ATXN10 1 0.02 0.13 8 1.77 72.95 62 9.12 Yes 49 0.94 Yes 0 0 No -26 0.42 No 16 42.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 46238833 + NM_013236 ATXN10 1 0.04 0.24 15 2.43 0 20 3.48 No 60 0.92 Yes 23 0.78 Yes -19 0.93 Yes 51 64.98 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 46204258 + NM_013236 ATXN10 1 0.08 0.46 20 6.51 78.75 38 6.09 Yes 25 1.38 Yes 0 0 No -37 0.78 Yes 33 95.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 46218997 + NM_013236 ATXN10 1 0.02 0.13 9 -2 0 26 5.48 No 72 1.05 Yes 25 0.49 Yes -25 0.49 No 58 43.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 46238822 + NM_013236 ATXN10 1 0.02 0.1 7 1.77 72.95 62 9.12 Yes 49 0.94 Yes 0 0 No -26 0.42 No 16 42.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 71881702 + NM_001137675 ATXN1L 1 6.05 2.24 56 7.08 92.56 23 6.24 Yes 76 -5.35 No 0 0 No -22 0.61 No 52 80.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 71885057 + NM_001137675 ATXN1L 1 0.96 0.42 20 4.27 75.92 25 6.65 Yes 12 1.47 Yes 0 0 No -24 0.94 Yes 46 94.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 111899110 - NM_001310121 ATXN2 1 1.37 0.26 18 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -16 0.48 No 54 74.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 111899110 - NM_001310121 ATXN2 1 1.18 0.19 12 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -16 0.48 No 54 74.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 111916907 - NM_001310121 ATXN2 1 9.38 2.29 62 9.18 84.37 12 4.95 No 28 0.43 No 0 0 No -27 0.63 No 43 72.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 111920636 - NM_001310121 ATXN2 1 1.53 0.4 23 7.57 86.44 26 5.66 Yes 36 1.1 Yes 25 0.9 Yes -25 0.93 Yes 45 92.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 111926579 - NM_001310121 ATXN2 1 0.24 0.19 11 2.3 0 13 3.86 No 37 0.76 No 0 0 No -24 0.36 No 39 74.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 111945570 - NM_001310121 ATXN2 1 0.24 0.18 10 11.18 90.96 34 6.08 Yes 68 -1.92 No 0 0 No -25 0.44 No 48 59.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 111948249 - NM_001310121 ATXN2 1 6.57 3.63 68 8.06 79.92 25 5.47 No 12 0.22 No 0 0 No -24 0.57 No 46 52.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 111950084 - NM_001310121 ATXN2 1 0.22 0.13 9 7.99 85.29 29 4.85 No 71 -2.42 No 0 0 No -29 0.33 No 39 44.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 111954204 - NM_001310121 ATXN2 1 0.32 0.19 10 9.3 84.84 15 5.49 No 2 1.17 Yes 31 0.64 Yes -27 0.68 Yes 23 63.67 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 111961700 - NM_001310121 ATXN2 1 0.18 0.11 8 11.7 93.96 29 5.83 Yes 66 0.77 Yes 0 0 No -33 0.62 No 42 61.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 111983764 - NM_001310121 ATXN2 1 0.31 0.28 19 13.03 95.65 42 7.66 Yes 56 2 Yes 0 0 No -23 0.67 Yes 47 81.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 111988934 - NM_001310121 ATXN2 1 0.14 0.13 8 6.53 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.59 No 51 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 111992879 - NM_001310121 ATXN2 1 0.6 0.28 16 -3.25 58.94 94 11.23 Yes 57 0.35 No 0 0 No -42 0.62 No 28 47.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28836221 + NM_001308230 ATXN2L 1 0.08 0.1 7 9 82.06 28 7.44 Yes 15 1.41 Yes 0 0 No -27 0.79 Yes 43 80.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28837561 + NM_001308230 ATXN2L 1 0.05 0.24 13 -17.59 0 50 8.15 Yes 37 0.77 No 0 0 No -33 0.84 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 28838882 + NM_001308230 ATXN2L 1 0.03 0.13 9 4.81 71.31 33 5.74 Yes 20 0.73 No 0 0 No -32 0.94 Yes 38 92.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 28842305 + NM_001308230 ATXN2L 1 1.01 3.9 67 7.34 74.04 29 5.64 Yes 49 1.69 Yes 29 0.55 Yes -28 0.46 No 42 25.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 28843525 + NM_001308230 ATXN2L 1 1.33 0.44 22 8.16 88.36 23 4.13 No 18 1.66 Yes 22 0.78 Yes -20 0.85 Yes 50 77.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 28843525 + NM_001308230 ATXN2L 1 1269.46 375.01 72 8.16 88.36 23 4.13 No 18 1.66 Yes 22 0.78 Yes -20 0.85 Yes 50 77.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 28843582 + NM_001308230 ATXN2L 1 0.31 0.1 7 5.45 74.54 28 5.36 No 75 1.64 Yes 0 0 No -18 0.54 No 42 51.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 28843594 + NM_001308230 ATXN2L 1 0.97 0.24 14 3.15 0 15 3.8 No 2 0.8 Yes 0 0 No -20 0.58 No 50 62.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 28844151 + NM_001308230 ATXN2L 1 0.06 0.22 13 4.21 84.82 19 4.8 No 17 1.23 Yes 0 0 No -18 0.89 Yes 52 70.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28844439 + NM_001308230 ATXN2L 1 0.03 0.21 13 5.17 73.01 39 6.32 Yes 26 0.12 No 0 0 No -33 0.54 No 37 67.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28844517 + NM_001308230 ATXN2L 1 0.02 0.15 9 4.6 73.95 37 5.94 Yes 24 0.35 No 0 0 No -31 0.63 No 39 68.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28845639 + NM_001308230 ATXN2L 1 0.06 0.22 11 -7.6 0 15 4.12 No 64 -5.29 No 24 0.89 Yes -14 0.72 Yes 56 52.99 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 28845843 + NM_001308230 ATXN2L 1 0.03 0.1 7 10.06 82.76 20 5.1 No 32 0.83 Yes 27 0.86 Yes -44 0.6 No 26 70.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 28846273 + NM_001308230 ATXN2L 1 0.43 1.28 51 4.3 73.34 17 5.92 Yes 72 0.27 No 0 0 No -19 0.53 No 51 61.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28846933 + NM_001308230 ATXN2L 1 0.06 0.14 8 0.54 85.51 24 5 No 72 1.17 Yes 0 0 No -21 0.66 No 52 60.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 28846866 + NM_001308230 ATXN2L 1 9.31 19.43 51 6.88 82.43 18 6.84 Yes 5 1.25 Yes 21 0.5 Yes -21 0.5 No 53 71.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 28846875 + NM_001308230 ATXN2L 1 0.29 0.56 28 -9.51 0 12 3.87 No 14 1.22 Yes 21 0.5 Yes -26 0.63 No 44 76.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 28846933 + NM_001308230 ATXN2L 1 0.27 0.57 31 0.54 85.51 24 5 No 72 1.17 Yes 0 0 No -21 0.66 No 52 60.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 28847646 + NM_001308230 ATXN2L 1 37.08 2.25 61 3.42 69.24 21 6.32 Yes 49 -1.11 No 20 0.51 Yes -20 0.82 Yes 50 81.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 28847769 + NM_001308230 ATXN2L 1 10.25 0.72 37 8.18 80.02 34 5.74 Yes 21 0.64 No 26 0.91 Yes -29 0.63 No 41 64.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 28848071 + NM_001308230 ATXN2L 1 215.68 12.33 72 5.24 79.9 21 4.29 No 46 2.23 Yes 26 0.83 Yes -58 0.31 No 12 74.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 92547402 - NR_028459 ATXN3 1 0.39 0.32 17 2.47 0 38 6.9 Yes 25 0.9 Yes 33 0.37 Yes -37 0.53 No 29 71.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 92549580 - NR_028459 ATXN3 1 0.77 0.57 29 3.92 82 21 5.61 Yes 45 1.4 Yes 25 0.69 Yes -25 0.56 No 26 40.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 92549848 - NR_028459 ATXN3 1 0.52 0.38 22 6.95 89.69 24 5.29 No 75 -3.76 No 23 0.82 Yes -23 0.62 No 47 81.04 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 92556912 - NR_028459 ATXN3 1 1.42 1.19 38 3.73 84.52 27 5.29 No 45 1.25 Yes 26 0.87 Yes -26 0.9 Yes 44 92.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 92562479 - NR_028459 ATXN3 1 0.41 0.26 17 0.8 61.74 69 6.99 Yes 56 1.86 Yes 22 0.71 Yes -25 0.82 Yes 45 25.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 92562479 - NR_028459 ATXN3 1 0.18 0.14 8 0.8 61.74 69 6.99 Yes 56 1.86 Yes 22 0.71 Yes -25 0.82 Yes 45 25.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 92563179 - NR_028459 ATXN3 1 0.52 0.22 14 -10.13 0 43 5.6 Yes 23 0.42 No 0 0 No -42 0.49 No 28 59.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 63889380 + NM_000333 ATXN7 1 14.73 2 62 11.11 92.02 36 5.83 Yes 23 0.68 No 0 0 No -21 0.5 No 49 62.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 63889708 + NM_000333 ATXN7 1 1.77 0.26 14 10.8 89.59 27 4.53 No 6 1.22 Yes 0 0 No -26 0.91 Yes 44 90.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 63898838 + NM_000333 ATXN7 1 3.18 1.18 42 -2.4 0 9 3.87 No 34 2.57 Yes 0 0 No -46 0.85 Yes 24 93.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 63901542 + NM_000333 ATXN7 1 0.2 0.11 7 6.28 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.74 Yes 51 87.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 63906951 + NM_000333 ATXN7 1 1.35 0.6 32 6.5 94.22 25 4.99 No 34 -2.18 No 0 0 No -25 0.81 Yes 45 72.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 63964041 + NM_000333 ATXN7 1 0.18 0.13 8 8.15 83.97 30 5.16 No 60 0.46 No 0 0 No -29 0.91 Yes 41 94.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 63965675 + NM_000333 ATXN7 1 0.17 0.11 8 5.37 73.28 34 5.78 Yes 75 -2.59 No 0 0 No -33 0.87 Yes 37 94.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 63968024 + NM_000333 ATXN7 1 0.18 0.11 8 7.67 78.53 22 5.44 No 32 1.35 Yes 0 0 No -28 0.45 No 49 57.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 63975791 + NM_000333 ATXN7 1 0.75 0.33 17 5.39 81.68 32 6.16 Yes 66 -0.32 No 0 0 No -19 0.62 No 51 75.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 63983296 + NM_000333 ATXN7 1 16.19 6.19 71 7.76 91.35 41 5.38 No 28 2.22 Yes 29 0.94 Yes -29 0.85 Yes 41 87.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 110031904 + NM_153340 ATXN7L2 1 4.91 0.53 29 9.86 87.91 17 5.39 No 29 0.39 No 0 0 No -29 0.43 No 48 55.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 110034648 + NM_153340 ATXN7L2 1 11.15 1.15 41 8.17 83.96 47 6.8 Yes 1 1.68 Yes 24 0.9 Yes -24 0.66 Yes 46 54.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 42271924 - NM_001098833 ATXN7L3 1 0.2 0.19 12 7.26 82.61 22 6.75 Yes 9 2.35 Yes 0 0 No -21 0.88 Yes 49 86.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42272236 - NM_001098833 ATXN7L3 1 0.06 0.14 9 -0.14 0 16 4.12 No 56 1.55 Yes 30 0.87 Yes -15 0.64 No 55 62.79 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 42272527 - NM_001098833 ATXN7L3 1 1.25 1.97 60 10.63 84.52 15 5 No 24 0.99 Yes 28 0.58 Yes -28 0.51 No 34 39.71 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 42272550 - NM_001098833 ATXN7L3 1 0.11 0.17 9 -1.03 0 14 5.57 Yes 1 0.39 No 28 0.58 Yes -28 0.28 No 57 54.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 42273254 - NM_001098833 ATXN7L3 1 5.19 7.29 72 10.11 90.27 41 6.35 Yes 28 1.43 Yes 29 0.83 Yes -29 0.59 No 41 75.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 42273469 - NM_001098833 ATXN7L3 1 17.21 25.72 72 6.13 73.46 60 6.31 Yes 3 0.6 No 27 0.65 Yes -27 0.41 No 11 44.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 42274683 - NM_001098833 ATXN7L3 1 0.11 0.14 9 6.86 76.63 26 5.39 No 29 -1.06 No 0 0 No -26 0.7 Yes 44 47.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 42274730 - NM_001098833 ATXN7L3 1 1.58 2.06 56 4.58 81.05 27 5.74 Yes 50 1.84 Yes 0 0 No -26 0.73 Yes 45 57.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 42274766 - NM_001098833 ATXN7L3 1 2.34 2.99 65 -3.45 74.2 27 5.2 No 14 1.87 Yes 0 0 No -26 0.93 Yes 44 93.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42275120 - NM_001098833 ATXN7L3 1 2.02 2.4 67 7.55 76.29 35 4.76 No 62 0.18 No 28 0.93 Yes -27 0.64 No 54 45.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 93981240 - NM_001698 AUH 1 2.52 0.15 10 9.1 96.24 26 4.93 No 48 0.86 Yes 0 0 No -25 0.92 Yes 45 94.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 94057080 - NM_001698 AUH 1 183.51 15.79 72 3.57 67.13 37 7.49 Yes 24 1.7 Yes 36 0.81 Yes -36 0.9 Yes 34 92.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 94089986 - NM_001698 AUH 1 1.72 0.42 22 6.76 75.85 29 5.74 Yes 5 -1.98 No 0 0 No -26 0.9 Yes 44 95.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 94106393 - NM_001698 AUH 1 4.3 0.96 41 1.71 79.57 19 4.1 No 26 0.62 No 0 0 No -19 0.87 Yes 51 83.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 94122723 - NM_001698 AUH 1 7.54 1.11 40 6.56 86.63 27 6.37 Yes 14 1.36 Yes 26 0.76 Yes -33 0.43 No 44 57.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 74754179 - NM_181575 AUP1 1 0.06 0.29 14 -1.09 0 16 4.12 No 14 1.33 Yes 0 0 No -26 0.89 Yes 44 89.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74754212 - NM_181575 AUP1 1 0.02 0.11 7 -4.42 59.68 17 5 No -2 0.34 No 18 0.81 Yes -19 0.63 No 51 43.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 74754249 - NM_181575 AUP1 1 5.92 30.72 72 4.56 73.84 27 5.29 No 41 2.52 Yes 26 0.68 Yes -53 0.36 No 47 48.37 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 74754252 - NM_181575 AUP1 1 0.15 0.82 35 0.56 71.14 24 5 No 38 2.52 Yes 26 0.68 Yes -57 0.31 No 50 50.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 74754280 - NM_181575 AUP1 1 0.15 0.75 37 -1.45 80.04 23 7.25 Yes 10 2.56 Yes 26 0.68 Yes -22 0.72 Yes 48 85.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 74754437 - NM_181575 AUP1 1 0.54 2.61 63 -3.93 0 13 4.36 No 9 0.01 No 0 0 No -31 0.51 No 39 42.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 74754521 - NM_181575 AUP1 1 0.24 1.19 47 -18 0 15 2.94 No 6 -1.2 No 23 0.51 Yes -6 0.47 No 59 25.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 74754984 - NM_181575 AUP1 1 0.25 1.08 49 2.83 80.92 19 4.99 No -2 1.17 Yes 28 0.47 Yes -18 0.54 No 52 60.1 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 74756378 - NM_181575 AUP1 1 0.04 0.14 10 4.94 67.36 17 5.74 Yes 40 0.93 Yes 0 0 No -52 0.69 Yes 51 44.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 74756402 - NM_181575 AUP1 1 0.08 0.25 15 -1.29 0 11 4.12 No 16 0.96 Yes 0 0 No -28 0.9 Yes 42 87.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 54958230 - NM_198433 AURKA 1 0.17 0.15 9 -10.48 79.02 25 5.43 No 54 0.43 No 0 0 No -24 0.81 Yes 46 73.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 54965726 - NM_198433 AURKA 1 3.48 0.24 15 0.43 84.41 22 7.57 Yes 9 1.39 Yes 25 0.67 Yes -21 0.53 No 49 49.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 1309621 - NM_017900 AURKAIP1 1 0.03 0.14 8 6 85.6 24 6.24 Yes 11 1.39 Yes 0 0 No -23 0.97 Yes 47 96.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1309742 - NM_017900 AURKAIP1 1 0.13 0.56 25 1.99 70.79 25 5.39 No 12 -1.81 No 0 0 No -24 0.48 No 48 67.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1309971 - NM_017900 AURKAIP1 1 0.3 1.22 49 6.96 75.24 26 6.71 Yes 58 -3.94 No 25 0.52 Yes -23 0.73 Yes 47 84.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8110253 - NM_001256834 AURKB 1 0.33 0.74 32 8.26 86.76 31 5.66 Yes 18 2.07 Yes 30 0.96 Yes -30 0.92 Yes 40 95.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8110689 - NM_001256834 AURKB 1 5.3 9.19 72 3.12 70.85 25 5.57 Yes 12 1.06 Yes 24 0.91 Yes -24 0.89 Yes 46 90.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8111220 - NM_001256834 AURKB 1 12.26 2.42 59 2.61 78.08 16 5.48 No 64 0.12 No 27 0.84 Yes -24 0.64 No 43 70.59 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 8113328 - NM_001256834 AURKB 1 1.79 0.36 22 7.83 74.62 30 5.57 Yes 63 0.37 No 0 0 No -29 0.89 Yes 41 86.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 8113544 - NM_001256834 AURKB 1 15.41 3.15 65 10.36 82.69 27 5.74 Yes 37 2.01 Yes 26 0.74 Yes -49 0.78 Yes 21 76.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8113568 - NM_001256834 AURKB 1 635.53 126.68 72 8.14 83.36 26 7.33 Yes 13 1.57 Yes 20 0.96 Yes -25 0.95 Yes 45 95.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 70189456 + NM_001127231 AUTS2 1 0.36 0.17 8 3.01 0 30 7.64 Yes 17 2.15 Yes 0 0 No -29 0.68 Yes 41 68.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 32546197 + NM_015060 AVL9 1 0.22 0.14 9 8.01 82.37 25 6.42 Yes 12 1.06 Yes 0 0 No -24 0.43 No 42 36.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 32554745 + NM_015060 AVL9 1 0.22 0.14 7 -0.91 51.92 62 7.76 Yes 41 1.46 Yes 0 0 No -53 0.47 No 17 64.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 32571226 + NM_015060 AVL9 1 1.08 0.71 30 7.84 87.88 31 4.21 No 54 2.35 Yes 26 0.86 Yes -26 0.89 Yes 44 93.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 32582783 + NM_015060 AVL9 1 0.87 0.57 31 8.13 83.23 28 6.27 Yes 38 1.75 Yes 0 0 No -18 0.42 No 32 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 32584333 + NM_015060 AVL9 1 0.29 0.28 15 6.02 79.23 31 6.07 Yes 51 1.23 Yes 0 0 No -30 0.86 Yes 40 77.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 32588678 + NM_015060 AVL9 1 0.52 0.53 29 11.1 90.71 19 5.42 No 6 1.18 Yes 0 0 No -26 0.64 No 44 69.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 32588681 + NM_015060 AVL9 1 0.15 0.17 11 7.4 83.81 22 5.64 Yes 9 1.19 Yes 0 0 No -21 0.73 Yes 41 66.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 32598192 + NM_015060 AVL9 1 0.21 0.19 10 8.5 90.05 30 4.04 No 22 1.47 Yes 0 0 No -29 0.76 Yes 41 85.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 32598834 + NM_015060 AVL9 1 4.36 3.07 67 7.91 82.71 43 6.65 Yes 13 0.24 No 0 0 No -37 0.37 No 34 51.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 32602169 + NM_015060 AVL9 1 1.31 0.82 34 4.6 87.5 27 4.68 No 4 0.43 No 0 0 No -26 0.38 No 44 53.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 32607662 + NM_015060 AVL9 1 0.28 0.15 10 9.44 86.87 23 4.79 No 36 0.72 No 0 0 No -22 0.8 Yes 48 82.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 32612721 + NM_015060 AVL9 1 1.83 1.49 52 9.03 93.82 18 5.77 Yes 28 1.14 Yes 0 0 No -32 0.46 No 53 44.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 32615338 + NM_015060 AVL9 1 0.59 0.63 34 9.05 89.22 19 7.02 Yes 6 1.09 Yes 0 0 No -27 0.67 Yes 52 64.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 338307 - NM_003502 AXIN1 1 0.62 0.29 17 8.57 84.45 39 6.07 Yes NA NA NA 21 0.45 Yes -21 0.8 Yes 49 78.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 346315 - NM_003502 AXIN1 1 0.36 0.15 10 7.44 81.92 24 6.13 Yes 11 1.56 Yes 0 0 No -23 0.7 Yes 47 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 348299 - NM_003502 AXIN1 1 0.83 0.26 15 6.82 78.22 22 5.91 Yes 9 1.96 Yes 0 0 No -21 0.64 No 49 86.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 349205 - NM_003502 AXIN1 1 0.64 0.19 12 8.52 85.43 22 5.06 No 9 0.17 No 0 0 No -21 0.47 No 49 56.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 354457 - NM_003502 AXIN1 1 2.88 0.71 31 6.89 78.88 26 6.32 Yes 13 1.76 Yes 19 0.92 Yes -33 0.51 No 45 76.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 358626 - NM_003502 AXIN1 1 2.88 0.81 29 5.12 75.88 21 5.57 Yes -3 0.36 No 0 0 No -24 0.71 Yes 46 58.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 369977 - NM_003502 AXIN1 1 4.62 1.78 55 8.13 92.19 30 5.74 Yes -2 0.16 No 0 0 No -25 0.37 No 38 40.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 373883 - NM_003502 AXIN1 1 0.39 0.18 11 9.21 83.46 26 6.08 Yes 13 1.33 Yes 0 0 No -25 0.81 Yes 45 88.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 28369967 - NM_001271650 AZI2 1 0.16 0.13 8 9.83 87.3 30 6 Yes 17 0.09 No 0 0 No -29 0.92 Yes 41 87.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 28373442 - NM_001271650 AZI2 1 14.95 11.18 72 2.84 0 38 5.92 Yes 25 0.44 No 27 0.82 Yes -31 0.87 Yes 39 93.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 28373446 - NM_001271650 AZI2 1 14.11 10.44 72 0.86 83.57 34 5.68 Yes 76 1.18 Yes 27 0.82 Yes -27 0.9 Yes 43 92.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 28379199 - NM_001271650 AZI2 1 0.25 0.17 10 7.88 92.91 16 5.66 Yes 47 1.05 Yes 0 0 No -27 0.47 No 43 57.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103842162 - NM_001301668 AZIN1 1 5.49 33.18 72 5.34 84.16 38 6.57 Yes 52 0.74 No 0 0 No -30 0.69 Yes 33 51.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 103842162 - NM_001301668 AZIN1 1 0.05 0.28 17 5.34 84.16 38 6.57 Yes 52 0.74 No 0 0 No -30 0.69 Yes 33 51.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 103842447 - NM_001301668 AZIN1 1 0.19 1.08 47 2.24 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.59 No 51 74.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 103842450 - NM_001301668 AZIN1 1 0.13 0.76 33 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -25 0.36 No 45 63.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103842623 - NM_001301668 AZIN1 1 0.03 0.19 11 4.19 0 38 7.25 Yes 25 1.33 Yes 0 0 No -37 0.57 No 33 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 103842627 - NM_001301668 AZIN1 1 0.07 0.43 22 2.3 84.41 34 6.97 Yes 21 1.35 Yes 0 0 No -33 0.56 No 37 78.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 103843867 - NM_001301668 AZIN1 1 0.02 0.11 7 4.78 84.41 27 6.14 Yes 14 0.72 No 0 0 No -29 0.94 Yes 41 95.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103846975 - NM_001301668 AZIN1 1 0.02 0.11 7 -12.79 0 26 5.09 No 76 -2.45 No 0 0 No -26 0.5 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 103848754 - NM_001301668 AZIN1 1 0.06 0.4 20 5.76 89 23 5 No 28 1.68 Yes 0 0 No -40 0.43 No 50 64.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103848770 - NM_001301668 AZIN1 1 1.78 11.94 72 9.06 97.54 25 5 No 12 1.68 Yes 24 0.88 Yes -24 0.91 Yes 46 91.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 103854407 - NM_001301668 AZIN1 1 0.05 0.25 16 9.19 83.19 18 3.98 No 5 1.07 Yes 0 0 No -30 0.56 No 40 72.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 103855958 - NM_001301668 AZIN1 1 1.6 6.58 72 3.15 76.15 23 5.2 No 65 0.83 Yes 0 0 No -22 0.86 Yes 48 74.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 103855975 - NM_001301668 AZIN1 1 0.03 0.14 10 -15.46 0 35 5.23 No 48 0.83 Yes 0 0 No -22 0.32 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103856003 - NM_001301668 AZIN1 1 0.03 0.14 7 2.85 70.18 33 7.31 Yes 20 0.82 Yes 29 0.36 Yes -32 0.8 Yes 38 81.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 103862356 - NM_001301668 AZIN1 1 0.03 0.13 8 1.52 83.98 20 4.69 No 49 1.29 Yes 0 0 No -40 0.67 Yes 22 67.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 103862373 - NM_001301668 AZIN1 1 32.15 128.11 72 11.3 96.1 31 4.27 No 32 1.3 Yes 23 0.76 Yes -23 0.65 No 47 77.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 103862394 - NM_001301668 AZIN1 1 0.81 3.18 67 6.33 84.4 24 5.1 No 11 1.01 Yes 23 0.84 Yes -23 0.84 Yes 47 63.57 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 103871417 - NM_001301668 AZIN1 1 0.07 0.42 22 6.2 82.24 35 5.89 Yes 22 1 Yes 29 0.39 Yes -34 0.72 Yes 36 65.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 103872057 - NM_001301668 AZIN1 1 0.02 0.11 7 4.11 0 34 7.82 Yes 21 1.21 Yes 0 0 No -33 0.95 Yes 37 96.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 45004617 + NM_004048 B2M 1 0 0.15 7 11.16 85.5 31 6.47 Yes 18 0.11 No 0 0 No -30 0.57 No 43 59.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 45008480 + NM_004048 B2M 1 0 0.25 10 -0.34 68.89 21 5.2 No 27 1.28 Yes 0 0 No -20 0.42 No 50 59.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 45008670 + NM_004048 B2M 1 0.01 0.93 39 -4.85 0 18 4.47 No -3 0.38 No 0 0 No -17 0.82 Yes 53 57.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 45009606 + NM_004048 B2M 1 0 0.15 10 0.88 63.86 19 6.07 Yes 6 0.22 No 0 0 No -18 0.49 No 48 64.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 45009622 + NM_004048 B2M 1 0.02 2.44 61 6 83.77 24 4.95 No 22 0.67 No 0 0 No -23 0.83 Yes 47 77.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 45009812 + NM_004048 B2M 1 0 0.17 10 0.95 0 11 4.12 No 17 2.6 Yes 0 0 No -29 0.57 No 41 78.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 160821303 - NM_033169 B3GALNT1 1 4.65 0.69 29 3.64 76.95 46 6.5 Yes 21 0.96 Yes 30 0.94 Yes -33 0.91 Yes 37 93.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 160821894 - NM_033169 B3GALNT1 1 2.12 0.26 16 9.88 82.29 19 5.5 No 6 1.1 Yes 28 0.5 Yes -26 0.47 No 49 53.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 235647821 - NM_001277155 B3GALNT2 1 0.87 0.49 30 2.27 0 21 4.11 No 19 0.28 No 0 0 No -20 0.7 Yes 50 59.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 235652551 - NM_001277155 B3GALNT2 1 0.31 0.13 8 -0.08 0 14 4.36 No 73 -5.99 No 0 0 No -42 0.43 No 22 29.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235652561 - NM_001277155 B3GALNT2 1 0.23 0.11 7 2.17 67.93 16 4.69 No 63 -5.35 No 0 0 No -38 0.34 No 38 54.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235652658 - NM_001277155 B3GALNT2 1 1.13 0.43 24 1.86 74.88 28 6.07 Yes 9 0.34 No 0 0 No -27 0.54 No 43 72.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 235658134 - NM_001277155 B3GALNT2 1 1.43 0.14 8 1.94 0 38 5.58 Yes 14 1.12 Yes 0 0 No -33 0.75 Yes 37 70.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62383709 - NR_109991 B3GAT3 1 0.17 0.15 7 3.99 0 38 6.63 Yes 25 0.62 No 33 0.49 Yes -37 0.61 No 33 46.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 62383713 - NR_109991 B3GAT3 1 2.25 2.1 29 11.01 95.65 34 6.32 Yes 21 0.63 No 33 0.49 Yes -33 0.6 No 37 50.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 62384810 - NR_109991 B3GAT3 1 0.27 0.18 12 -1.79 0 19 3.89 No NA NA NA 0 0 No -48 0.6 No 45 67.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62386452 - NR_109991 B3GAT3 1 0.28 0.17 10 4.21 82.57 24 6 Yes 11 1.47 Yes 0 0 No -23 0.9 Yes 47 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80901952 - NM_001320742 B3GNTL1 1 1.91 0.15 9 5.87 88.6 27 4.96 No 74 0.92 Yes 28 0.89 Yes -26 0.85 Yes 44 77.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80907516 - NM_001320742 B3GNTL1 1 1.29 0.11 7 6.88 76.61 22 8.25 Yes 9 2.13 Yes 0 0 No -21 0.88 Yes 49 90.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80909926 - NM_001320742 B3GNTL1 1 1.8 0.11 8 5.56 87.73 39 7.9 Yes 26 0.41 No 0 0 No -23 0.81 Yes 47 81.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80914278 - NM_001320742 B3GNTL1 1 4.54 0.33 14 -2.92 65.86 18 4.77 No 17 -1.47 No 0 0 No -20 0.54 No 50 75.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 80924741 - NM_001320742 B3GNTL1 1 0.61 0.1 7 12.13 97.77 22 6.16 Yes 76 -2.61 No 0 0 No -24 0.53 No 39 63.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 80936653 - NM_001320742 B3GNTL1 1 1.16 0.15 7 8.93 80.44 26 6 Yes 26 0.33 No 0 0 No -26 0.82 Yes 44 59.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80959294 - NM_001320742 B3GNTL1 1 3.74 0.44 20 10.81 91.96 25 7.39 Yes 12 1.44 Yes 0 0 No -24 0.97 Yes 46 96.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80960659 - NM_001320742 B3GNTL1 1 4.42 0.58 34 9.59 77.67 29 5.92 Yes 16 0.37 No 0 0 No -28 0.95 Yes 42 95.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80966798 - NM_001320742 B3GNTL1 1 2.28 0.25 15 9.64 89.27 29 5.57 Yes 36 0.88 Yes 0 0 No -25 0.6 No 45 59.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80970205 - NM_001320742 B3GNTL1 1 11.73 1.74 50 2.25 80.74 20 4.69 No 7 0.87 Yes 0 0 No -19 0.7 Yes 47 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80970483 - NM_001320742 B3GNTL1 1 9 1.01 43 12.59 85.19 25 6.21 Yes 70 -2 No 0 0 No -28 0.74 Yes 46 55.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80983885 - NM_001320742 B3GNTL1 1 0.76 0.18 11 3.9 74.22 29 6.27 Yes 16 1.12 Yes 0 0 No -28 0.74 Yes 28 71.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80985551 - NM_001320742 B3GNTL1 1 1.92 0.36 20 5.82 87.6 15 4.46 No 2 1.28 Yes 0 0 No -24 0.65 No 18 51.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80987031 - NM_001320742 B3GNTL1 1 0.68 0.13 8 7.18 80.41 17 7.68 Yes 4 0.7 No 0 0 No -26 0.67 Yes 44 71.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80987466 - NM_001320742 B3GNTL1 1 2.86 0.5 25 9.84 82.65 20 5.66 Yes 7 1.89 Yes 0 0 No -19 0.47 No 51 51.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80988779 - NM_001320742 B3GNTL1 1 3.6 0.67 34 12.03 91.01 31 5.83 Yes 23 0.96 Yes 30 0.51 Yes -30 0.7 Yes 40 83.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80990958 - NM_001320742 B3GNTL1 1 1.14 0.25 12 9.67 85.39 30 6.52 Yes 33 0.13 No 0 0 No -29 0.71 Yes 41 77.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80995644 - NM_001320742 B3GNTL1 1 1.56 0.4 25 5.54 88.96 26 3.89 No 8 0.15 No 0 0 No -25 0.82 Yes 45 75.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80995703 - NM_001320742 B3GNTL1 1 0.58 0.13 8 5.97 78.27 37 5.58 Yes 42 0.77 Yes 0 0 No -30 0.77 Yes 40 75.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33113872 - NM_001497 B4GALT1 1 0.08 0.29 17 -0.04 0 28 5.65 Yes 15 1.34 Yes 0 0 No -33 0.55 No 37 71.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 33155517 - NM_001497 B4GALT1 1 0.06 0.1 7 10.15 95.07 17 7.06 Yes 4 1.5 Yes 0 0 No -26 0.85 Yes 44 67.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 33165617 - NM_001497 B4GALT1 1 0.08 0.15 10 11.41 85.93 29 5.26 No 27 0.66 No 0 0 No -28 0.64 No 42 76.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 44448488 + NM_001005417 B4GALT2 1 0.63 0.49 30 9.27 85.95 22 5.65 Yes 9 0.76 No 0 0 No -21 0.89 Yes 49 89.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 161141855 - NM_001199873 B4GALT3 1 4.9 7.32 72 6.73 76.57 34 5.79 Yes 21 1.82 Yes 0 0 No -33 0.62 No 37 70.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 161144920 - NM_001199873 B4GALT3 1 0.09 0.13 8 5.74 84.02 24 5.48 No 64 -4.58 No 0 0 No -27 0.57 No 43 39.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 161145684 - NM_001199873 B4GALT3 1 15.56 4.33 68 5.33 77.36 29 6.98 Yes 53 0.83 Yes 28 0.83 Yes -28 0.62 No 42 61.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 161145852 - NM_001199873 B4GALT3 1 0.39 0.14 9 6.86 83.93 16 4.09 No 61 2.2 Yes 0 0 No -41 0.32 No 36 41.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 161145865 - NM_001199873 B4GALT3 1 370.77 103.64 72 13.18 77.17 30 5.43 No 48 2.21 Yes 29 0.58 Yes -29 0.44 No 41 36.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 161146299 - NM_001199873 B4GALT3 1 4.91 3.44 69 9.69 78.1 17 6.63 Yes 4 1.19 Yes 25 0.43 Yes -25 0.65 No 54 72.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 161146897 - NM_001199873 B4GALT3 1 0.93 0.64 32 10.25 87.52 41 7.62 Yes 28 2.75 Yes 40 0.86 Yes -40 0.78 Yes 30 94.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 118938513 - NM_212543 B4GALT4 1 1.2 0.33 20 7.96 79.75 42 7.99 Yes 43 2.56 Yes 0 0 No -55 0.43 No 29 81.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 118948137 - NM_212543 B4GALT4 1 0.35 0.14 9 3.56 74.2 21 4.9 No 42 -4.73 No 0 0 No -20 0.64 No 53 64.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 118955099 - NM_212543 B4GALT4 1 1.45 0.14 7 7.61 81.17 24 4.75 No 65 2.05 Yes 23 0.88 Yes -23 0.75 Yes 47 69.8 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 118959378 - NM_212543 B4GALT4 1 2.17 0.36 22 5.85 85 14 5.2 No 1 0.9 Yes 20 0.4 Yes -20 0.38 No 46 24.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 48264430 - NM_004776 B4GALT5 1 0.44 0.39 21 9.66 89.96 30 6.54 Yes 17 1.4 Yes 0 0 No -29 0.9 Yes 41 89.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 48266114 - NM_004776 B4GALT5 1 0.93 0.83 39 9.11 84.42 28 7.13 Yes 15 1.05 Yes 0 0 No -27 0.94 Yes 43 95.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29202947 - NM_004775 B4GALT6 1 0.17 0.22 11 8.76 75.99 23 5.17 No 10 1.04 Yes 0 0 No -25 0.81 Yes 45 83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29206362 - NM_004775 B4GALT6 1 0.12 0.11 7 1.97 0 47 7.13 Yes 29 1.63 Yes 22 0.72 Yes -31 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 29215774 - NM_004775 B4GALT6 1 0.11 0.1 7 -0.36 0 24 5 No 11 0.09 No 0 0 No -23 0.95 Yes 47 92.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 29217874 - NM_004775 B4GALT6 1 0.29 0.32 16 10.4 84.37 30 5.33 No 54 0.76 No 0 0 No -25 0.54 No 41 59.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 29224392 - NM_004775 B4GALT6 1 0.13 0.15 9 -2.98 61.51 35 7.62 Yes 22 0.99 Yes 0 0 No -34 0.47 No 13 43.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 29238041 - NM_004775 B4GALT6 1 0.09 0.11 7 1.54 0 15 4.26 No 21 1.75 Yes 0 0 No -33 0.62 No 37 76.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 29240472 - NM_004775 B4GALT6 1 0.15 0.22 12 12.22 95.19 25 3.87 No 35 1.07 Yes 0 0 No -29 0.59 No 41 54.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 29240922 - NM_004775 B4GALT6 1 0.09 0.14 8 11.33 88.42 33 5.51 No 67 1.5 Yes 0 0 No -24 0.56 No 46 78.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 29256581 - NM_004775 B4GALT6 1 2.09 1.6 57 1.18 71.89 35 6.94 Yes 47 1.27 Yes 0 0 No -34 0.56 No 36 79.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 177028426 + NM_007255 B4GALT7 1 3.02 0.75 35 9.59 86.28 26 5.65 Yes 68 -4.03 No 25 0.67 Yes -25 0.79 Yes 45 80.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 177030252 + NM_007255 B4GALT7 1 1.02 0.26 18 6.83 85.51 19 4.9 No 21 0.97 Yes 0 0 No -27 0.41 No 43 62.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 177031066 + NM_007255 B4GALT7 1 1.5 0.39 24 7.12 81.76 26 5.56 Yes -4 0.61 No 25 0.63 Yes -25 0.74 Yes 45 78.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 177032045 + NM_007255 B4GALT7 1 2.46 1.29 47 13.37 87.8 32 5.56 Yes 19 1.3 Yes 31 0.86 Yes -31 0.6 No 39 59.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 177034283 + NM_007255 B4GALT7 1 0.78 0.39 23 5.25 77.97 25 5.57 Yes 12 0.26 No 24 0.82 Yes -24 0.75 Yes 46 84.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 177035192 + NM_007255 B4GALT7 1 0.3 0.15 10 7.05 81.89 33 7.42 Yes -2 0.55 No 0 0 No -32 0.53 No 38 91.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 177035340 + NM_007255 B4GALT7 1 0.2 0.14 9 1.89 0 15 4.58 No 10 -1.88 No 0 0 No -22 0.78 Yes 50 33.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 177035694 + NM_007255 B4GALT7 1 0.59 0.33 20 10.8 89.79 23 5.39 No 10 1.07 Yes 0 0 No -22 0.58 No 48 64.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 177036543 + NM_007255 B4GALT7 1 0.36 0.15 9 -8.7 71.71 35 6.4 Yes 22 1.66 Yes 0 0 No -34 0.86 Yes 36 84.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 19251186 - NM_001321216 B9D1 1 0.53 0.13 8 -1.06 0 12 3.49 No 28 1.35 Yes 0 0 No -40 0.75 Yes 30 91.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 41867109 - NM_030578 B9D2 1 10.69 1.69 55 8.33 99.09 22 5.97 Yes 9 2.26 Yes 21 0.93 Yes -21 0.63 No 49 77.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 41868983 - NM_030578 B9D2 1 1.94 0.32 17 8.04 86.87 21 7.21 Yes 8 1.31 Yes 20 0.85 Yes -20 0.74 Yes 50 84.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17379602 + NM_001033549 BABAM1 1 389.89 125.82 72 7.85 74.97 41 6.33 Yes 50 1.35 Yes 22 0.77 Yes -22 0.77 Yes 43 51.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 17379610 + NM_001033549 BABAM1 1 4.68 1.64 57 0.64 0 15 4.08 No 58 1.33 Yes 22 0.77 Yes -30 0.8 Yes 35 38.67 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 17384136 + NM_001033549 BABAM1 1 0.07 0.22 13 8.31 85.63 19 5.38 No 6 1.33 Yes 0 0 No -24 0.66 No 52 79.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17386576 + NM_001033549 BABAM1 1 0.13 0.24 15 -6.99 0 23 5.74 Yes 66 -2.77 No 0 0 No -22 0.46 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17386585 + NM_001033549 BABAM1 1 1.06 1.92 61 3.07 72.82 17 5.82 Yes 4 1.9 Yes 0 0 No -23 0.49 No 54 83.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17386597 + NM_001033549 BABAM1 1 0.47 0.9 41 2.3 0 18 4.57 No 16 2.1 Yes 0 0 No -17 0.57 No 42 84.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17386615 + NM_001033549 BABAM1 1 0.07 0.14 8 -11.79 0 12 3.87 No 34 2.07 Yes 0 0 No -20 0.45 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17387326 + NM_001033549 BABAM1 1 0.07 0.17 11 -14.45 0 10 4 No 37 2.1 Yes 0 0 No -49 0.73 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 17387332 + NM_001033549 BABAM1 1 0.37 0.92 38 3.66 80.74 16 4.69 No 43 2.09 Yes 0 0 No -55 0.45 No 15 52.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17387673 + NM_001033549 BABAM1 1 0.17 0.57 25 -1.65 0 26 4.74 No -1 1.17 Yes 0 0 No -25 0.46 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17387675 + NM_001033549 BABAM1 1 0.07 0.21 12 -1.28 0 14 4.47 No 1 1.21 Yes 0 0 No -13 0.46 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17389480 + NM_001033549 BABAM1 1 0.08 0.19 11 -6.65 0 14 5.35 No 1 0.25 No 0 0 No -13 0.88 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 17387633 + NM_001033549 BABAM1 1 0.03 0.1 7 -9.51 0 16 6.05 Yes 31 0.53 No 0 0 No -32 0.54 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17387643 + NM_001033549 BABAM1 1 0.04 0.14 8 0.17 0 22 3.56 No 41 0.53 No 0 0 No -42 0.49 No 30 48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17388192 + NM_001033549 BABAM1 1 0.11 0.28 18 4.04 85.02 17 5.25 No 4 0.6 No 25 0.57 Yes -27 0.83 Yes 43 56.43 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 17388195 + NM_001033549 BABAM1 1 0.08 0.19 13 2.24 80.12 20 5.52 No 7 0.57 No 0 0 No -30 0.75 Yes 40 50.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 17389779 + NM_001033549 BABAM1 1 0.14 0.33 18 7.59 78.88 36 6.59 Yes 59 -3.76 No 0 0 No -30 0.79 Yes 40 90.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 30698551 + NR_027655 BACH1 1 0.49 0.28 16 6.26 76 29 5.14 No 16 0.39 No 0 0 No -28 0.77 Yes 48 45.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 30699601 + NR_027655 BACH1 1 0.89 0.47 25 5.42 83.25 13 6.53 Yes 67 0.16 No 0 0 No -20 0.37 No 43 35.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30701864 + NR_027655 BACH1 1 0.21 0.18 11 4.54 69.16 28 7.98 Yes 65 0.87 Yes 0 0 No -22 0.71 Yes 48 65.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 30704242 + NR_027655 BACH1 1 1.8 0.13 9 6.87 87.15 92 7.56 Yes 68 0.33 No 0 0 No -29 0.67 Yes 41 39.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 30704436 + NR_027655 BACH1 1 2.05 0.13 8 6.52 85.02 18 7 Yes 5 1.11 Yes 0 0 No -17 0.43 No 53 55.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 30714719 + NR_027655 BACH1 1 750.83 44.44 72 8.41 80.02 38 6.16 Yes 28 0.5 No 27 0.51 Yes -27 0.57 No 36 41.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 64037807 - NM_004322 BAD 1 0.16 0.15 9 4.01 73.83 34 6.73 Yes 12 1.72 Yes 0 0 No -33 0.5 No 41 64.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 64039784 - NM_004322 BAD 1 0.18 0.13 7 3.65 84.41 36 6.98 Yes 23 1.55 Yes 0 0 No -35 0.79 Yes 35 83.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64040371 - NM_004322 BAD 1 0.74 0.4 20 5.29 77.5 33 6.91 Yes 20 0.64 No 30 0.54 Yes -32 0.62 No 38 84.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 64044516 - NM_004322 BAD 1 3.22 1.86 56 6.62 75.41 37 5.6 Yes 20 0.35 No 32 0.69 Yes -32 0.54 No 38 76.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 33259353 - NM_001172415 BAG1 1 0.16 0.39 18 2.96 0 38 7.87 Yes 25 1.52 Yes 0 0 No -37 0.86 Yes 33 77.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33262245 - NM_001172415 BAG1 1 1.83 3.24 65 7.15 85.89 57 7.58 Yes 55 1.41 Yes 22 0.62 Yes -31 0.41 No 38 31.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 57039000 + NM_004282 BAG2 1 0.59 0.57 30 9.64 89.91 22 5.93 Yes 9 1.63 Yes 21 0.95 Yes -21 0.93 Yes 49 95.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 57039088 + NM_004282 BAG2 1 0.13 0.14 10 7.44 74.89 18 5 No 14 1.26 Yes 0 0 No -26 0.92 Yes 44 92.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38055011 + NM_004874 BAG4 1 0.23 0.17 11 5.56 83.9 28 6.14 Yes 64 -4.18 No 0 0 No -27 0.68 Yes 43 74.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 38066594 + NM_004874 BAG4 1 0.72 0.6 29 4.8 82.34 22 4.8 No 40 1.65 Yes 0 0 No -21 0.88 Yes 49 84.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38067587 + NM_004874 BAG4 1 0.45 0.31 19 6.36 87.19 24 5.5 No 42 0.3 No 0 0 No -26 0.56 No 48 56.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40737650 + NM_014952 BAHD1 1 0.69 0.17 10 8.98 85.48 16 7.27 Yes 3 1.76 Yes 0 0 No -37 0.78 Yes 33 59.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40754113 + NM_014952 BAHD1 1 44.64 15.94 72 5.43 80.31 25 8.18 Yes 12 2.2 Yes 21 0.89 Yes -24 0.9 Yes 46 93.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40757542 + NM_014952 BAHD1 1 99.32 33.79 72 4.44 0 12 4.24 No 23 1.21 Yes 26 0.9 Yes -35 0.69 Yes 35 70.38 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 97933678 - NM_018842 BAIAP2L1 1 1 0.61 28 -3.07 0 14 4.47 No 28 1.4 Yes 29 0.95 Yes -40 0.96 Yes 30 96.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 97935826 - NM_018842 BAIAP2L1 1 0.23 0.17 9 -14.56 71.73 34 6.16 Yes 21 1.32 Yes 0 0 No -33 0.83 Yes 37 93.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 97939917 - NM_018842 BAIAP2L1 1 0.11 0.1 7 -1.38 63.88 40 7.84 Yes 27 0.82 Yes 18 0.92 Yes -17 0.28 No 44 50.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 33543396 - NM_001188 BAK1 1 0.09 0.17 11 6.39 81.18 26 5.25 No 49 1.24 Yes 0 0 No -25 0.59 No 45 76.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 33543641 - NM_001188 BAK1 1 0.08 0.13 8 5.46 75.52 24 5.83 Yes 74 2.18 Yes 0 0 No -27 0.79 Yes 43 77.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 33543644 - NM_001188 BAK1 1 1.91 3.14 64 2.44 79.81 21 5.57 Yes 71 2.19 Yes 0 0 No -24 0.8 Yes 46 84.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 33545686 - NM_001188 BAK1 1 1.04 1.72 55 5.79 87.42 20 5.03 No 48 1.9 Yes 23 0.9 Yes -23 0.93 Yes 47 82.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 33545689 - NM_001188 BAK1 1 0.37 0.67 33 2.2 89.49 17 4.73 No 45 1.9 Yes 23 0.9 Yes -20 0.92 Yes 50 85.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65770310 + NM_003860 BANF1 1 0.03 0.19 11 11.09 83.56 23 5.39 No 45 -1.92 No 26 0.57 Yes -28 0.6 No 48 46.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 88012045 + NM_001173543 BANP 1 0.26 0.13 8 11.69 94.92 30 5.48 No 67 1.02 Yes 23 0.54 Yes -23 0.74 Yes 47 74.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88021416 + NM_001173543 BANP 1 1.04 0.15 10 4.12 82.31 27 4.73 No 42 1.72 Yes 0 0 No -26 0.67 Yes 44 60.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 88037087 + NM_001173543 BANP 1 6.6 1.25 50 7.98 87.57 25 3.5 No 25 0.6 No 24 0.49 Yes -24 0.77 Yes 46 69.22 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 88037416 + NM_001173543 BANP 1 0.99 0.21 15 11.5 94.85 23 6.28 Yes 10 0.98 Yes 28 0.9 Yes -27 0.49 No 43 62.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 88041604 + NM_001173543 BANP 1 1.25 0.4 22 7.82 89.65 29 5.48 No 16 0.97 Yes 0 0 No -28 0.88 Yes 42 94.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88061118 + NM_001173543 BANP 1 0.52 0.17 9 3.49 80.19 28 6.24 Yes 47 1.87 Yes 0 0 No -27 0.8 Yes 43 77.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88068928 + NM_001173543 BANP 1 246 38.33 72 1.62 0 30 8.53 Yes 17 1.77 Yes 29 0.85 Yes -29 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 88069909 + NM_001173543 BANP 1 1.81 0.47 23 -0.29 64.33 25 5.57 Yes 12 0.35 No 0 0 No -24 0.92 Yes 46 87.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88069998 + NM_001173543 BANP 1 0.54 0.15 8 2.89 77.77 14 5 No 1 0.08 No 0 0 No -49 0.75 Yes 57 54.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 88105426 + NM_001173543 BANP 1 3.24 0.15 9 11.51 88.38 39 7.07 Yes NA NA NA 0 0 No -38 0.47 No 36 43.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52436709 - NM_004656 BAP1 1 0.16 0.35 21 -1.11 0 12 4.24 No 50 1.45 Yes 20 0.79 Yes -41 0.34 No 23 22.78 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52436718 - NM_004656 BAP1 1 0.31 0.65 33 -2.61 0 14 4.47 No 41 1.44 Yes 20 0.79 Yes -53 0.34 No 17 45.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52436885 - NM_004656 BAP1 1 0.23 0.35 18 -14 64.77 30 4.2 No 74 1.27 Yes 29 0.29 Yes -21 0.37 No 49 46.03 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52436957 - NM_004656 BAP1 1 3.6 5.88 71 7.75 77.43 15 5.88 Yes 2 1.33 Yes 25 0.53 Yes -35 0.5 No 49 57.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52437488 - NM_004656 BAP1 1 0.37 0.38 21 3.81 74.76 50 6.5 Yes 7 0.61 No 0 0 No -35 0.79 Yes 35 57.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52437574 - NM_004656 BAP1 1 0.43 0.4 21 6.85 73.63 19 5.83 Yes 6 0.99 Yes 24 0.67 Yes -27 0.78 Yes 43 58.99 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 52437695 - NM_004656 BAP1 1 0.33 0.31 19 3.52 77.42 13 5.1 No 0 1.88 Yes 21 0.52 Yes -21 0.35 No 49 57.72 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52438600 - NM_004656 BAP1 1 0.13 0.14 10 -7.04 81.32 26 6.78 Yes 13 1.55 Yes 0 0 No -25 0.72 Yes 45 75.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52440339 - NM_004656 BAP1 1 5.49 8.38 72 4.79 76.91 24 5 No 49 0.03 No 23 0.94 Yes -23 0.88 Yes 47 45.3 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 52440355 - NM_004656 BAP1 1 0.93 1.42 50 2.73 66.67 25 5.62 Yes 33 0.03 No 23 0.94 Yes -27 0.37 No 46 37.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 52440475 - NM_004656 BAP1 1 0.11 0.17 10 -0.36 0 16 3.36 No 67 -1.01 No 0 0 No -20 0.78 Yes 50 59.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52440493 - NM_004656 BAP1 1 0.22 0.35 19 4.05 80.36 41 6.85 Yes 76 -1.83 No 0 0 No -32 0.6 No 30 80.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215603846 - NM_000465 BARD1 1 1.61 1.01 42 6.85 84 38 6.04 Yes 25 1.11 Yes 0 0 No -37 0.66 No 33 78.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215617245 - NM_000465 BARD1 1 0.36 0.32 18 4.55 79.77 34 6.53 Yes 53 0.31 No 28 0.23 Yes -40 0.56 No 30 53.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 215626352 - NM_000465 BARD1 1 0.23 0.19 12 3.39 0 36 6.62 Yes 73 1.06 Yes 0 0 No -30 0.95 Yes 40 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215657950 - NM_000465 BARD1 1 1.36 0.92 35 6.69 87.86 21 4.03 No 28 -1.71 No 0 0 No -24 0.92 Yes 46 85.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215669858 - NM_000465 BARD1 1 0.22 0.1 7 5.08 87.07 27 5.2 No 14 0.64 No 0 0 No -26 0.86 Yes 44 80.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75991208 + NM_006399 BATF 1 0.17 0.35 22 10.4 84.58 26 5.57 Yes 58 1.71 Yes 0 0 No -25 0.89 Yes 45 92.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 76001191 + NM_006399 BATF 1 0.08 0.18 12 8.71 84.98 35 6.32 Yes 61 1.13 Yes 0 0 No -34 0.69 Yes 53 59.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 76001881 + NM_006399 BATF 1 0.05 0.11 8 5.87 84.22 34 5.79 Yes 21 0.23 No 0 0 No -33 0.46 No 45 57.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 76012769 + NM_006399 BATF 1 0.18 0.39 23 7.82 77.3 54 8.46 Yes 41 1.88 Yes 29 0.87 Yes -53 0.73 Yes 17 81.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 212861764 - NM_018664 BATF3 1 2.44 2.81 54 6.98 93.63 21 5.1 No 65 0.06 No 0 0 No -25 0.55 No 45 40.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 212862034 - NM_018664 BATF3 1 0.23 0.21 13 5.94 83.83 19 5.83 Yes 61 -2.38 No 0 0 No -27 0.75 Yes 43 76.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 212869255 - NM_018664 BATF3 1 0.99 0.85 45 6.23 81.4 34 4.86 No 21 1.32 Yes 0 0 No -33 0.78 Yes 37 78.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 212870421 - NM_018664 BATF3 1 3.14 1.15 42 1.49 72.61 13 5.62 Yes 67 -4.07 No 19 0.65 Yes -32 0.54 No 50 22.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 49458814 + NR_027882 BAX 1 0.07 0.17 10 -0.81 0 13 4.36 No 50 0.31 No 0 0 No -40 0.55 No 30 69.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 49464554 + NR_027882 BAX 1 0.03 0.19 12 2.68 82.27 27 5.47 No 50 2.8 Yes 0 0 No -26 0.81 Yes 13 64.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 49464676 + NR_027882 BAX 1 0.02 0.19 10 5.45 80.22 32 4.38 No 5 1.11 Yes 0 0 No -26 0.66 No 45 55.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 49464739 + NR_027882 BAX 1 8.89 68.88 72 7.94 87.49 22 8.34 Yes 9 1.75 Yes 0 0 No -21 0.81 Yes 49 91.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49464827 + NR_027882 BAX 1 0.02 0.19 12 -0.01 70.67 42 6.92 Yes 43 1.68 Yes 23 0.59 Yes -41 0.33 No 32 56.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 35231233 - NM_182648 BAZ1A 1 0.2 0.53 27 8.01 87.32 29 3.93 No 7 0.23 No 0 0 No -28 0.75 Yes 42 86.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 35238177 - NM_182648 BAZ1A 1 0.09 0.18 12 7.5 82.31 21 8.27 Yes 8 1.33 Yes 0 0 No -36 0.56 No 34 70.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 35242463 - NM_182648 BAZ1A 1 0.13 0.28 15 9.99 89.54 29 6.21 Yes 76 0.38 No 0 0 No -28 0.4 No 42 54.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 35255163 - NM_182648 BAZ1A 1 0.43 0.18 11 4.23 84.89 19 4.8 No 62 0.93 Yes 0 0 No -18 0.74 Yes 52 81.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35255419 - NM_182648 BAZ1A 1 1.45 0.5 28 0.1 0 13 4.05 No 17 0.27 No 0 0 No -33 0.32 No 49 66.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 35255428 - NM_182648 BAZ1A 1 446.31 141.65 72 4.48 83.14 21 5.1 No 8 0.31 No 24 0.41 Yes -24 0.47 No 50 32.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 35255428 - NM_182648 BAZ1A 1 2.7 0.88 42 4.48 83.14 21 5.1 No 8 0.31 No 24 0.41 Yes -24 0.47 No 50 32.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 35260322 - NM_182648 BAZ1A 1 0.63 0.21 12 2.57 0 55 8.93 Yes 42 1.32 Yes 0 0 No -51 0.74 Yes 19 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35262042 - NM_182648 BAZ1A 1 1.37 2.89 66 5.68 85.75 36 5.47 No 3 0.72 No 0 0 No -35 0.68 Yes 35 63.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 35262042 - NM_182648 BAZ1A 1 0.23 0.5 24 5.68 85.75 36 5.47 No 3 0.72 No 0 0 No -35 0.68 Yes 35 63.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 35280239 - NM_182648 BAZ1A 1 0.15 0.39 19 -1.94 0 33 7.79 Yes 24 1.53 Yes 0 0 No -36 0.85 Yes 34 85.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35297930 - NM_182648 BAZ1A 1 0.1 0.29 17 0.75 85.2 21 4.9 No 75 -4.76 No 0 0 No -20 0.91 Yes 50 85.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 35313816 - NM_182648 BAZ1A 1 0.06 0.17 9 9.25 88.27 25 7.4 Yes 12 1.38 Yes 0 0 No -24 0.91 Yes 46 95.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35343873 - NM_182648 BAZ1A 1 0.53 0.53 29 1.6 0 28 7 Yes 15 1.3 Yes 31 0.95 Yes -27 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 72858472 - NM_032408 BAZ1B 1 0.1 0.18 12 5.16 67.29 31 7.28 Yes 18 1.37 Yes 21 0.76 Yes -30 0.96 Yes 40 95.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 72863956 - NM_032408 BAZ1B 1 0.06 0.14 10 0.05 82.62 29 4.34 No 70 0.78 Yes 0 0 No -28 0.5 No 42 64.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72865759 - NM_032408 BAZ1B 1 0.04 0.1 7 8.68 89.04 20 5.32 No 7 0.86 Yes 0 0 No -19 0.7 Yes 51 81.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72875097 - NM_032408 BAZ1B 1 0.19 0.47 29 9.91 89.29 29 4.33 No 11 0.96 Yes 0 0 No -23 0.52 No 47 60.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72877331 - NM_032408 BAZ1B 1 0.09 0.22 12 6.77 75.84 15 5.19 No 70 1.02 Yes 0 0 No -29 0.66 No 41 67.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72878527 - NM_032408 BAZ1B 1 0.68 1.94 55 4.79 66.7 51 6.62 Yes 19 2.08 Yes 0 0 No -31 0.46 No 39 79.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 72879896 - NM_032408 BAZ1B 1 0.21 0.47 27 10.33 95.65 27 6.03 Yes 8 0.42 No 24 0.94 Yes -26 0.87 Yes 44 88.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 72883433 - NM_032408 BAZ1B 1 0.03 0.1 7 5.67 90.92 28 4.66 No 3 0.64 No 0 0 No -27 0.71 Yes 43 64.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 72890251 - NM_032408 BAZ1B 1 0.19 0.53 30 4.74 84.41 28 6.4 Yes 15 1.41 Yes 0 0 No -27 0.76 Yes 43 76.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72897293 - NM_032408 BAZ1B 1 0.26 0.78 42 9.89 91.52 22 5.07 No 50 -3.23 No 0 0 No -26 0.72 Yes 44 84.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 72911282 - NM_032408 BAZ1B 1 0.2 0.53 27 10.02 91.49 17 3.92 No 30 1.76 Yes 0 0 No -28 0.6 No 42 50.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72911304 - NM_032408 BAZ1B 1 0.07 0.18 12 9.94 92.91 21 6.71 Yes 8 1.75 Yes 0 0 No -20 0.71 Yes 50 72.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72921179 - NM_032408 BAZ1B 1 0.1 0.32 15 6.17 88.76 27 5.48 No 14 0.52 No 0 0 No -27 0.73 Yes 43 73.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 72921874 - NM_032408 BAZ1B 1 0.15 0.46 20 2.3 0 35 11.39 Yes 50 1.55 Yes 0 0 No -34 0.9 Yes 36 82.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72922795 - NM_032408 BAZ1B 1 0.14 0.35 20 -1.16 0 14 3.99 No 10 0.59 No 0 0 No -22 0.57 No 48 74.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 72923625 - NM_032408 BAZ1B 1 0.25 0.6 30 4.72 90.11 21 5.14 No 8 1.24 Yes 0 0 No -20 0.63 No 15 60.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72935040 - NM_032408 BAZ1B 1 0.24 0.29 18 -2.8 0 15 4.12 No 14 1.66 Yes 0 0 No -48 0.61 No 56 43.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56993140 - NM_001300905 BAZ2A 1 14.25 13.25 72 5.1 79.59 28 6.53 Yes 15 1.71 Yes 0 0 No -27 0.81 Yes 43 89.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56993902 - NM_001300905 BAZ2A 1 3.74 4.79 71 7.93 75.3 25 5.57 Yes 64 1.58 Yes 25 0.79 Yes -24 0.86 Yes 46 81.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56994304 - NM_001300905 BAZ2A 1 0.14 0.21 11 8.44 86.82 57 6.63 Yes 54 0.91 Yes 27 0.69 Yes -25 0.65 No 45 66.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 56994871 - NM_001300905 BAZ2A 1 3.22 4.61 70 -5.89 0 17 4.36 No 12 0.8 Yes 23 0.61 Yes -16 0.8 Yes 21 43.48 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 57000154 - NM_001300905 BAZ2A 1 0.06 0.14 8 6.55 78.35 29 5.92 Yes 29 1.88 Yes 0 0 No -28 0.44 No 17 64.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 57000180 - NM_001300905 BAZ2A 1 0.49 0.85 34 8.06 82.48 16 5.24 No 3 1.9 Yes 28 0.8 Yes -27 0.86 Yes 43 89.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57000791 - NM_001300905 BAZ2A 1 0.16 0.25 16 7.43 95.1 34 5.41 No 54 -2.16 No 0 0 No -25 0.74 Yes 45 86.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57000794 - NM_001300905 BAZ2A 1 0.09 0.17 9 7.24 88.3 31 5.23 No 51 -2.16 No 0 0 No -22 0.71 Yes 48 83.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57003722 - NM_001300905 BAZ2A 1 0.22 0.28 17 -2.52 0 12 4.22 No 35 1.52 Yes 22 0.93 Yes -32 0.56 No 33 48.57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57003749 - NM_001300905 BAZ2A 1 0.07 0.1 7 4.62 74.86 21 6.93 Yes 8 1.54 Yes 22 0.93 Yes -20 0.78 Yes 50 85.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57004324 - NM_001300905 BAZ2A 1 2.17 3.33 69 1.72 74.9 13 5.29 No 0 0.48 No 21 0.42 Yes -56 0.4 No 58 42.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 57006056 - NM_001300905 BAZ2A 1 0.19 0.26 17 8.28 83.21 22 6.73 Yes 9 1.25 Yes 29 0.74 Yes -26 0.83 Yes 44 83.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57015038 - NM_001300905 BAZ2A 1 1.29 0.54 28 8.07 89.27 28 5.39 No 55 1.1 Yes 0 0 No -30 0.71 Yes 40 58.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 57015058 - NM_001300905 BAZ2A 1 0.46 0.19 13 4.05 73.96 39 5.53 No 60 1.33 Yes 0 0 No -28 0.5 No 42 47.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 57017017 - NM_001300905 BAZ2A 1 0.5 0.18 12 4.93 84.41 26 5.66 Yes 13 0.6 No 0 0 No -25 0.67 Yes 45 82.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57020899 - NM_001300905 BAZ2A 1 0.69 0.26 16 9.83 98.74 25 4.16 No 4 0.5 No 0 0 No -29 0.6 No 37 50.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57022528 - NM_001300905 BAZ2A 1 0.58 0.29 14 6.95 91.42 19 4.78 No 6 0.57 No 0 0 No -21 0.52 No 49 58.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 160178539 - NM_001329858 BAZ2B 1 3.6 0.64 30 10.15 97.68 45 6.44 Yes 32 1.08 Yes 22 0.57 Yes -22 0.63 No 48 59.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 160192048 - NM_001329858 BAZ2B 1 1.94 0.15 8 3.01 0 29 5.98 Yes 16 0.75 No 0 0 No -34 0.67 Yes 36 77.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 160268507 - NM_001329858 BAZ2B 1 2.6 0.53 24 5.2 85.52 28 6.69 Yes 73 -4.44 No 0 0 No -27 0.78 Yes 43 80.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 160294421 - NM_001329858 BAZ2B 1 0.66 0.26 16 2.96 0 37 9.39 Yes 24 1.75 Yes 0 0 No -36 0.42 No 34 71.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 160304915 - NM_001329858 BAZ2B 1 18.66 2.67 56 -0.82 0 9 3.87 No 46 0.58 No 40 0.23 Yes -46 0.66 No 28 82.69 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 160304915 - NM_001329858 BAZ2B 1 1.69 0.22 14 -0.82 0 9 3.87 No 46 0.58 No 40 0.23 Yes -46 0.66 No 28 82.69 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 160396887 - NM_001329858 BAZ2B 1 0.74 0.11 8 7.16 82.51 27 6.91 Yes 19 0.71 No 0 0 No -31 0.86 Yes 39 84.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 160399147 - NM_001329858 BAZ2B 1 0.95 0.13 9 9.01 87.82 31 6.28 Yes 27 1.55 Yes 0 0 No -30 0.85 Yes 40 94.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 160405309 - NM_001329858 BAZ2B 1 4.52 0.74 34 7.9 87.82 43 6.5 Yes 54 0.33 No 0 0 No -36 0.76 Yes 34 70.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 112660881 - NM_001195306 BBIP1 1 1.33 1.24 50 7.83 86.73 21 7.21 Yes 8 1.24 Yes 20 0.87 Yes -20 0.87 Yes 50 91.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 112667595 - NM_001195306 BBIP1 1 8.67 5.75 71 11.16 97.03 18 5.06 No 5 0.96 Yes 30 0.35 Yes -30 0.53 No 40 43.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 66287091 + NM_024649 BBS1 1 1.23 0.33 18 -0.51 0 22 4.51 No 13 1.02 Yes 21 0.78 Yes -25 0.92 Yes 45 92.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66290642 + NM_024649 BBS1 1 1.48 0.21 14 3.86 67.72 25 5.29 No 51 1.05 Yes 24 0.91 Yes -24 0.93 Yes 46 94.28 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66291173 + NM_024649 BBS1 1 1.43 0.33 16 -0.6 0 13 4.07 No 0 0.43 No 0 0 No -19 0.39 No 51 46.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 66295590 + NM_024649 BBS1 1 0.75 0.18 11 8.34 80.03 11 6.58 Yes 55 0.64 No 0 0 No -21 0.73 Yes 49 79.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66299766 + NM_024649 BBS1 1 1.34 0.21 14 8.44 79.99 29 5.83 Yes 54 0.89 Yes 28 0.86 Yes -28 0.67 Yes 52 45.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 76741481 - NM_024685 BBS10 1 9.9 0.76 40 4.82 72.18 27 7.06 Yes 49 -1.18 No 0 0 No -26 0.82 Yes 44 79.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 56526495 - NM_031885 BBS2 1 0.59 0.11 8 6.78 76.81 22 5.87 Yes 28 0.94 Yes 0 0 No -29 0.6 No 41 78.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 56532606 - NM_031885 BBS2 1 5.28 1.06 43 1.39 66.88 30 5.67 Yes 17 0.8 Yes 26 0.6 Yes -29 0.58 No 41 80.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 56532609 - NM_031885 BBS2 1 1.95 0.38 24 3.15 76.43 27 5.47 No 14 0.81 Yes 26 0.6 Yes -26 0.57 No 44 79.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 56534890 - NM_031885 BBS2 1 0.41 0.1 7 0.16 0 19 4.58 No 60 0.6 No 25 0.37 Yes -40 0.43 No 53 51.85 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 56543407 - NM_031885 BBS2 1 1.3 0.4 19 1.17 0 53 7.68 Yes 74 0.77 Yes 0 0 No -38 0.38 No 21 30.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 170344301 + NM_152384 BBS5 1 1.45 0.14 9 -1.69 0 20 4.97 No 20 0.33 No 0 0 No -22 0.62 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 122748131 - NM_176824 BBS7 1 3.51 0.43 25 2.33 0 56 7.55 Yes 43 1.02 Yes 0 0 No -43 0.52 No 27 57.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 122749828 - NM_176824 BBS7 1 0.86 0.28 18 4.19 72.13 31 7.12 Yes 18 1.26 Yes 0 0 No -30 0.81 Yes 40 88.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 122749916 - NM_176824 BBS7 1 0.31 0.11 8 7.56 89.22 35 7.2 Yes 25 -1.65 No 22 0.41 Yes -40 0.46 No 30 54.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 122760056 - NM_176824 BBS7 1 0.25 0.13 8 4.56 84.41 30 4.96 No 40 1.19 Yes 0 0 No -29 0.69 Yes 41 87.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 122770818 - NM_176824 BBS7 1 0.35 0.11 8 5.5 85.02 20 7.14 Yes 7 1.29 Yes 0 0 No -19 0.85 Yes 51 90 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 122774426 - NM_176824 BBS7 1 0.86 0.19 13 4.65 83.65 25 5.1 No 72 -4.42 No 0 0 No -25 0.52 No 46 39.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 122775979 - NM_176824 BBS7 1 9.16 1.85 55 0.48 67.55 23 3.79 No 69 0.37 No 26 0.54 Yes -23 0.35 No 31 39.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 33222886 + NM_001348036 BBS9 1 1.26 0.13 8 5.61 71.32 14 5.28 No 1 0.13 No 0 0 No -22 0.45 No 48 56.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 33390638 + NM_001348036 BBS9 1 1.06 0.11 8 10.03 86.5 18 5.53 No 5 0.82 Yes 0 0 No -31 0.67 Yes 39 81.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 33405175 + NM_001348036 BBS9 1 1.73 0.17 9 11.45 94.82 21 6.22 Yes 73 -2.71 No 0 0 No -23 0.76 Yes 38 64.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 33644809 + NM_001348036 BBS9 1 4.08 0.43 21 2.92 80.13 21 5.19 No 8 1.28 Yes 0 0 No -50 0.51 No 24 74.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 107242366 + NM_001276286 BBX 1 0.71 0.24 13 3.79 82.91 23 5.09 No NA NA NA 0 0 No -23 0.82 Yes 47 72.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 107252280 + NM_001276286 BBX 1 0.16 0.11 8 3.16 76.01 39 6.13 Yes 33 0.38 No 0 0 No -23 0.85 Yes 47 77.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 107278614 + NM_001276286 BBX 1 0.52 0.33 20 9.91 91.32 31 5.66 Yes 70 -2.92 No 0 0 No -28 0.69 Yes 48 50.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 107357253 + NM_001276286 BBX 1 0.23 0.17 12 7.13 84.46 29 7.59 Yes 5 0.73 No 0 0 No -28 0.83 Yes 42 84.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 107357348 + NM_001276286 BBX 1 0.46 0.29 16 11.16 92.01 30 5.74 Yes 40 0.35 No 29 0.78 Yes -29 0.6 No 41 68.99 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 107360637 + NM_001276286 BBX 1 1.92 1.21 48 4.31 79.43 26 4.54 No 51 0.47 No 25 0.9 Yes -25 0.9 Yes 45 88.83 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 107380674 + NM_001276286 BBX 1 1.74 1.29 51 9.09 96.41 35 12.51 Yes 22 2.28 Yes 34 0.64 Yes -34 0.81 Yes 36 88.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 107396273 + NM_001276286 BBX 1 0.32 0.22 12 7.03 87.93 21 5.79 Yes 40 2.3 Yes 27 0.86 Yes -27 0.94 Yes 43 95.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 107470523 + NM_001276286 BBX 1 0.6 0.46 25 5.77 86.22 23 4.55 No 6 0.2 No 0 0 No -22 0.84 Yes 48 87.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 107517447 + NM_001276286 BBX 1 3.61 2.94 65 3.95 83.21 31 5.66 Yes 56 -1.77 No 29 0.76 Yes -30 0.74 Yes 40 60.88 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 107225007 + NM_001008405 BCAP29 1 0.25 0.28 17 -1.96 50.69 41 6.33 Yes 7 -1.99 No 0 0 No -25 0.43 No 45 45.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 107227855 + NM_001008405 BCAP29 1 0.24 0.28 13 4.64 80.57 41 6.41 Yes -4 0.85 Yes 21 0.42 Yes -34 0.58 No 36 70.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 107235742 + NM_001008405 BCAP29 1 0.1 0.11 7 8.23 72.71 21 5.12 No 8 0.97 Yes 0 0 No -32 0.34 No 34 66.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 107236313 + NM_001008405 BCAP29 1 0.1 0.11 7 -3.97 81.99 30 6.31 Yes 53 1.43 Yes 27 0.6 Yes -25 0.68 Yes 45 77.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 107239206 + NM_001008405 BCAP29 1 0.1 0.17 9 6.34 75.1 36 7.02 Yes 49 0.43 No 0 0 No -36 0.44 No 34 45.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 152966366 - NM_001256447 BCAP31 1 0.15 0.46 25 11.44 82.46 28 5.83 Yes 15 0.28 No 0 0 No -27 0.81 Yes 43 69.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 152967557 - NM_001256447 BCAP31 1 0.22 0.89 42 -4.56 0 15 3.87 No 43 2.02 Yes 0 0 No -55 0.93 Yes 15 93.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 152967561 - NM_001256447 BCAP31 1 0.03 0.13 7 -19.9 0 52 8.83 Yes 39 2.04 Yes 0 0 No -51 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 152967562 - NM_001256447 BCAP31 1 0.05 0.21 14 -11.8 0 51 8.77 Yes 38 2.04 Yes 0 0 No -50 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 152970557 - NM_001256447 BCAP31 1 0.08 0.31 16 12.51 90.98 28 5.57 Yes 15 1.01 Yes 0 0 No -27 0.81 Yes 43 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 152989018 - NM_001256447 BCAP31 1 0.09 0.21 11 5.84 80.68 36 6.82 Yes 24 -2.86 No 0 0 No -35 0.65 No 35 46.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 75267897 - NM_001170715 BCAR1 1 0.18 0.11 8 4.98 80.63 17 5.09 No 4 0.03 No 0 0 No -21 0.76 Yes 49 71.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 52631409 - NM_001323347 BCAS1 1 1.74 0.15 9 3.14 75.47 47 9.48 Yes 34 1.13 Yes 0 0 No -46 0.9 Yes 24 94.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 115112693 - NM_005872 BCAS2 1 0.07 0.19 11 -15.3 0 30 7.08 Yes 0 0.32 No 0 0 No -29 0.77 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 115117000 - NM_005872 BCAS2 1 0.37 0.93 45 6.38 76.99 28 5.74 Yes 15 1.09 Yes 0 0 No -27 0.77 Yes 43 72.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58765380 + NM_001330414 BCAS3 1 1.48 0.18 12 5.29 75.89 43 5.85 Yes 16 1.54 Yes 28 0.84 Yes -28 0.92 Yes 42 76.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 58766292 + NM_001330414 BCAS3 1 7.41 0.96 40 9.76 95.84 25 8.1 Yes 12 1.55 Yes 24 0.79 Yes -24 0.71 Yes 46 76.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 58786776 + NM_001330414 BCAS3 1 0.93 0.13 7 2.65 0 20 5.57 Yes 75 -3.61 No 25 0.9 Yes -24 0.53 No 46 53.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 58804830 + NM_001330414 BCAS3 1 0.62 0.1 7 6.1 82.25 24 5 No 29 1.11 Yes 0 0 No -23 0.96 Yes 47 98.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59081160 + NM_001330414 BCAS3 1 3.83 0.57 28 6.8 89.62 65 8 Yes 52 1.28 Yes 27 0.86 Yes -27 0.68 Yes 43 65.99 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 59104226 + NM_001330414 BCAS3 1 1.65 0.19 13 8.15 84.1 35 6.93 Yes 44 1.33 Yes 34 0.75 Yes -34 0.72 Yes 36 84.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 59134904 + NM_001330414 BCAS3 1 4.06 0.97 32 8.9 91.83 34 5.01 No 30 1.01 Yes 0 0 No -29 0.57 No 41 74.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 49446820 + NM_017843 BCAS4 1 0.45 1.22 47 0.69 0 29 5.64 Yes 16 1.21 Yes 0 0 No -28 0.93 Yes 42 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 49449245 + NM_017843 BCAS4 1 0.59 1.17 50 11.68 89.14 33 5.59 Yes 69 -2.44 No 39 0.13 Yes -32 0.53 No 47 35.59 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 49453286 + NM_017843 BCAS4 1 0.12 0.22 15 -4.82 0 18 6.48 Yes 5 1.64 Yes 0 0 No -27 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 49457073 + NM_017843 BCAS4 1 0.63 1.19 46 6.84 90.35 25 5.65 Yes 12 0.57 No 24 0.73 Yes -35 0.48 No 39 51.45 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 49458173 + NM_017843 BCAS4 1 0.07 0.18 11 7.3 90.55 23 5.1 No 10 0.53 No 0 0 No -22 0.85 Yes 48 88.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 49468478 + NM_017843 BCAS4 1 20.14 2.93 58 9.18 80.3 30 9.83 Yes 57 2.08 Yes 0 0 No -29 0.95 Yes 41 96.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 49468615 + NM_017843 BCAS4 1 1.1 0.24 15 7.75 87.58 27 6.32 Yes 14 1.37 Yes 0 0 No -26 0.95 Yes 44 93.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 49493025 + NM_017843 BCAS4 1 6.88 1.36 50 -0.17 69.52 31 5.74 Yes 18 1.47 Yes 0 0 No -30 0.76 Yes 40 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 24987742 - NM_001178092 BCAT1 1 0.26 0.24 13 14.11 98.91 33 5.66 Yes 58 -1.84 No 32 0.6 Yes -32 0.83 Yes 38 95.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 24989528 - NM_001178092 BCAT1 1 0.13 0.18 8 -5.34 62.81 38 5.88 Yes 76 0.74 No 0 0 No -29 0.54 No 33 35.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 25029889 - NM_001178092 BCAT1 1 0.49 0.83 31 7.4 93.82 21 5.14 No 4 0.45 No 0 0 No -20 0.48 No 45 57.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49299706 - NM_001284325 BCAT2 1 0.43 0.64 33 5.94 86.67 16 5.06 No 61 1.62 Yes 0 0 No -20 0.84 Yes 50 77.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49303370 - NM_001284325 BCAT2 1 0.13 0.11 7 4.08 82.77 22 5.27 No -2 0.55 No 18 0.93 Yes -22 0.86 Yes 48 44.28 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 127520473 + NM_078469 BCCIP 1 0.03 0.13 7 7.75 87.51 24 3.71 No 7 0.41 No 0 0 No -23 0.94 Yes 47 90.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 127524672 + NM_078469 BCCIP 1 78.86 202.29 72 3.6 78.8 61 6.49 Yes 67 0.49 No 21 0.76 Yes -25 0.73 Yes 45 77.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 127524675 + NM_078469 BCCIP 1 0.74 2.01 51 1.92 76.4 64 6.62 Yes 70 0.49 No 0 0 No -28 0.66 Yes 42 75.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 127524705 + NM_078469 BCCIP 1 0.07 0.19 12 -1.48 0 22 5.12 No 42 0.34 No 0 0 No -58 0.36 No 12 60.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 127529782 + NM_078469 BCCIP 1 0.09 0.24 15 8.72 84.41 43 7.51 Yes 30 1.85 Yes 23 0.77 Yes -42 0.82 Yes 28 95.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 127529829 + NM_078469 BCCIP 1 0.58 1.5 50 -6.04 0 14 3.56 No 17 0.7 No 0 0 No -29 0.62 No 41 70.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 41924629 + NM_001164783 BCKDHA 1 0.16 0.14 9 9.08 88.27 29 7.68 Yes 16 1.98 Yes 28 0.88 Yes -28 0.94 Yes 42 95.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 41928863 + NM_001164783 BCKDHA 1 0.12 0.13 8 7.95 80.73 34 5.3 No 75 2.16 Yes 0 0 No -33 0.78 Yes 37 91.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 41930406 + NM_001164783 BCKDHA 1 1.54 1.5 49 5.27 85.05 22 4.43 No 49 -2.03 No 22 0.69 Yes -22 0.47 No 48 50.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 80845561 + NM_001318975 BCKDHB 1 0.38 0.38 15 9.84 86.46 30 7.04 Yes 11 1.75 Yes 29 0.9 Yes -29 0.78 Yes 41 88.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 80879527 + NM_001318975 BCKDHB 1 0.53 0.56 29 10.69 93.06 33 4.96 No 38 0.96 Yes 32 0.8 Yes -32 0.8 Yes 38 62.84 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 80914624 + NM_001318975 BCKDHB 1 0.44 0.46 24 6.28 83.69 25 4.42 No 17 0.63 No 0 0 No -22 0.51 No 53 38.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 80965113 + NM_001318975 BCKDHB 1 0.27 0.26 14 6.43 76.94 27 5.85 Yes 14 0.76 No 0 0 No -26 0.43 No 41 64.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 80974389 + NM_001318975 BCKDHB 1 0.2 0.21 13 13.97 90.66 35 5.99 Yes 22 0.4 No 0 0 No -29 0.73 Yes 41 78.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 80984920 + NM_001318975 BCKDHB 1 2.66 1.56 51 9.57 92 29 5.8 Yes 11 0.66 No 0 0 No -23 0.48 No 42 47.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 80991188 + NM_001318975 BCKDHB 1 1.88 1.06 42 4.35 73.08 22 5.6 Yes 9 1.41 Yes 0 0 No -21 0.74 Yes 49 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 80998159 + NM_001318975 BCKDHB 1 0.46 0.26 13 8.43 77.14 26 7.75 Yes 13 1.43 Yes 0 0 No -25 0.84 Yes 45 92.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 81017202 + NM_001318975 BCKDHB 1 2.13 1.39 48 9.14 90.5 27 5.99 Yes 14 1.42 Yes 0 0 No -26 0.87 Yes 44 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 81018800 + NM_001318975 BCKDHB 1 0.23 0.13 9 10.45 87.82 38 6.08 Yes 57 0.69 No 0 0 No -30 0.78 Yes 40 70.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 31121424 + NM_001122957 BCKDK 1 0.17 0.22 12 6.9 86.23 24 5.47 No 39 0.45 No 23 0.68 Yes -26 0.74 Yes 44 62.86 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 85732388 - NM_003921 BCL10 1 0.06 0.13 8 6.86 86.73 22 7.02 Yes 68 1.74 Yes 0 0 No -25 0.87 Yes 45 85.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85733480 - NM_003921 BCL10 1 0.05 0.1 7 6.24 82.22 28 7.67 Yes 15 1.42 Yes 0 0 No -27 0.81 Yes 43 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85733633 - NM_003921 BCL10 1 3.95 8.22 72 5.73 83.07 13 5.1 No 73 1.91 Yes 0 0 No -22 0.71 Yes 51 55.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 85733650 - NM_003921 BCL10 1 3.38 7.01 72 -5.01 64.29 24 4.87 No 56 1.91 Yes 0 0 No -39 0.79 Yes 31 77.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85734898 - NM_003921 BCL10 1 0.1 0.21 10 8.16 89.84 30 5.43 No 61 0.67 No 0 0 No -29 0.42 No 41 34.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 80253539 - NM_004049 BCL2A1 1 0.06 0.26 14 1.43 64.38 21 5.89 Yes -2 0.24 No 26 0.7 Yes -21 0.74 Yes 49 71.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 80260035 - NM_004049 BCL2A1 1 21.01 73.6 72 6.32 85.7 32 4.58 No -1 0.66 No 22 0.69 Yes -22 0.79 Yes 48 86.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50170253 + NR_104201 BCL2L12 1 0.11 0.15 10 0.01 66.77 28 5.37 No 49 -3.07 No 24 0.58 Yes -22 0.41 No 48 62.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 50170262 + NR_104201 BCL2L12 1 0.07 0.11 7 -5.96 0 12 4.24 No 58 -3.63 No 24 0.58 Yes -31 0.56 No 39 56.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 50170278 + NR_104201 BCL2L12 1 8.19 12.19 72 -1.58 71.15 20 5 No 7 1 Yes 24 0.58 Yes -19 0.88 Yes 51 75.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50175363 + NR_104201 BCL2L12 1 0.09 0.11 7 9.42 88.43 14 6.06 Yes 48 0.82 Yes 31 0.34 Yes -29 0.8 Yes 32 35.02 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 50177017 + NR_104201 BCL2L12 1 0.13 0.14 10 0.64 0 14 4.47 No 1 1.19 Yes 0 0 No -17 0.7 Yes 53 68.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 18186879 + NM_001270730 BCL2L13 1 0.29 0.21 12 7.91 86.15 37 4.7 No 12 1.33 Yes 0 0 No -24 0.57 No 46 64.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 18188084 + NM_001270730 BCL2L13 1 0.36 0.26 12 11.95 95.65 29 4.22 No 33 -1.6 No 0 0 No -19 0.81 Yes 51 88.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 18205039 + NM_001270730 BCL2L13 1 0.32 0.22 15 6.46 86.84 27 5.29 No 39 1.5 Yes 0 0 No -26 0.69 Yes 19 61.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 23780181 + NM_001199839 BCL2L2 1 5.11 0.56 28 12.52 90.45 28 5.26 No 33 0.31 No 28 0.48 Yes -28 0.56 No 42 73.02 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 23793319 + NM_001199864 BCL2L2-PABPN1 1 0.05 0.44 26 3.28 0 15 4.58 No 43 0.66 No 0 0 No -55 0.4 No 37 64.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 45263070 + NM_005178 BCL3 1 0.7 0.38 23 9.08 88.28 35 5.98 Yes 22 0.87 Yes 0 0 No -34 0.76 Yes 36 67.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 122473414 + NM_001024808 BCL7A 1 0.47 0.21 13 7.76 92.42 19 5.99 Yes 6 1 Yes 0 0 No -18 0.55 No 41 65.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 122473417 + NM_001024808 BCL7A 1 0.8 0.36 21 8.65 94 22 6.24 Yes 9 1 Yes 0 0 No -21 0.84 Yes 49 76.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122481020 + NM_001024808 BCL7A 1 0.29 0.15 9 4.93 78.29 41 8.7 Yes 62 -2.71 No 0 0 No -36 0.59 No 30 73.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 122484004 + NM_001024808 BCL7A 1 0.46 0.17 10 5.49 88.62 10 4.7 No 74 -3.81 No 0 0 No -22 0.16 No 33 29.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 72966590 - NM_001197244 BCL7B 1 0.42 0.31 13 4.58 76.68 41 6.09 Yes 65 -3.16 No 19 0.91 Yes -25 0.58 No 45 74.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 72967976 - NM_001197244 BCL7B 1 0.38 0.25 16 5.01 84.17 27 5.74 Yes 67 -1.37 No 0 0 No -26 0.71 Yes 21 78.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 72968000 - NM_001197244 BCL7B 1 8.41 5.35 71 4.02 84.41 31 5.65 Yes 43 -1.37 No 30 0.61 Yes -25 0.55 No 45 80.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 147084684 + NM_004326 BCL9 1 0.86 0.22 15 5.35 82.15 32 7.47 Yes 19 1.81 Yes 0 0 No -31 0.92 Yes 39 92.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 147089695 + NM_004326 BCL9 1 2.05 0.56 29 7.67 87.89 24 5.17 No 11 0.37 No 0 0 No -23 0.95 Yes 47 97.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 147089698 + NM_004326 BCL9 1 0.44 0.14 9 5.33 83.39 27 5.45 No 14 0.37 No 0 0 No -26 0.94 Yes 44 97.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 147095678 + NM_004326 BCL9 1 13.45 3.53 71 4.37 86.56 25 5 No 42 0.65 No 0 0 No -24 0.86 Yes 46 81.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 136588301 - NM_001077440 BCLAF1 1 0.06 0.13 9 -4.39 75.7 19 4.68 No 25 0.96 Yes 0 0 No -18 0.6 No 33 64.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 136588314 - NM_001077440 BCLAF1 1 137.42 269.69 72 3.78 72.61 48 5.8 Yes 12 0.99 Yes 24 0.85 Yes -24 0.75 Yes 46 69.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 136589412 - NM_001077440 BCLAF1 1 0.23 0.89 37 6.99 86.12 16 5.26 No 3 0.81 Yes 21 0.85 Yes -21 0.92 Yes 49 85.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 136590331 - NM_001077440 BCLAF1 1 0.03 0.11 8 5.81 87.1 27 6.61 Yes 6 0.97 Yes 0 0 No -26 0.73 Yes 44 76.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 136590442 - NM_001077440 BCLAF1 1 1.81 7.19 72 7.49 92.55 19 7.54 Yes 56 0.62 No 26 0.68 Yes -26 0.49 No 44 53.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 136591522 - NM_001077440 BCLAF1 1 0.13 0.42 22 8.33 80.13 26 6.57 Yes 13 1.35 Yes 25 0.89 Yes -25 0.71 Yes 45 83.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 136593215 - NM_001077440 BCLAF1 1 0.58 2.53 64 -13.57 67.34 29 4.57 No 16 0.42 No 25 0.87 Yes -28 0.75 Yes 42 60.86 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 136595328 - NM_001077440 BCLAF1 1 0.55 2.61 63 9.1 76.16 26 6 Yes 13 1.38 Yes 25 0.71 Yes -25 0.75 Yes 45 84.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 136597128 - NM_001077440 BCLAF1 1 7.37 25.76 72 2.93 87.94 21 5 No 8 0.24 No 20 0.91 Yes -20 0.91 Yes 50 92.27 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 136599915 - NM_001077440 BCLAF1 1 1890.32 289.21 72 7.57 83.14 20 7.46 Yes 7 1.08 Yes 23 0.63 Yes -23 0.48 No 47 64.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 39923206 - NM_001123383 BCOR 1 28.51 9.64 72 4.65 82.27 24 4.9 No 54 0.48 No 23 0.91 Yes -23 0.91 Yes 47 93.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 23659868 + NM_021574 BCR 1 0.25 0.13 8 9.53 88.45 21 5 No 29 0.95 Yes 0 0 No -20 0.86 Yes 50 85.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219526108 + NM_001320717 BCS1L 1 0.44 0.26 13 4.53 77.09 35 5.63 Yes 6 1.46 Yes 26 0.94 Yes -18 0.63 No 52 64.92 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 219527196 + NM_001320717 BCS1L 1 0.36 0.26 12 -3.9 0 16 4.24 No 72 -6.47 No 26 0.69 Yes -15 0.79 Yes 55 47.26 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 219527237 + NM_001320717 BCS1L 1 2.5 2.01 61 0.24 0 32 6.64 Yes 63 -1.6 No 26 0.69 Yes -30 0.73 Yes 39 55.94 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 219527965 + NM_001320717 BCS1L 1 4.48 3.11 66 -0.37 0 21 5 No 34 -1.6 No 20 0.68 Yes -20 0.31 No 44 30.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 197239258 - NM_203314 BDH1 1 0.13 0.11 7 -2.16 75.85 24 4.06 No 0 0.61 No 27 0.95 Yes -23 0.64 No 58 26.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 197247153 - NM_203314 BDH1 1 1.65 1.49 44 5.08 82.31 32 8.52 Yes 35 1.63 Yes 0 0 No -31 0.7 Yes 39 83.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 197247725 - NM_203314 BDH1 1 0.21 0.22 11 6.05 79.77 53 7.53 Yes 11 1.37 Yes 0 0 No -23 0.42 No 18 69.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 197254859 - NM_203314 BDH1 1 0.45 0.39 22 6.71 95.19 17 4.56 No 4 0.25 No 0 0 No -25 0.51 No 47 41.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 197257616 - NM_203314 BDH1 1 1.56 1.44 46 8.81 85.22 29 5.57 Yes 16 0.78 Yes 28 0.93 Yes -28 0.91 Yes 42 97.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 197259035 - NM_203314 BDH1 1 0.1 0.11 7 5.72 72.84 101 7.25 Yes 0 1.55 Yes 0 0 No -24 0.56 No 46 54.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 197261025 - NM_203314 BDH1 1 0.16 0.11 7 4.84 76.68 37 7.6 Yes 24 0.93 Yes 0 0 No -36 0.86 Yes 34 95.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 197265824 - NM_203314 BDH1 1 7.2 4.71 69 11.34 90.85 24 7.48 Yes 11 1.63 Yes 27 0.65 Yes -27 0.55 No 43 63.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 197270115 - NM_203314 BDH1 1 0.39 0.26 15 6.38 91.81 15 5.17 No 57 0.91 Yes 0 0 No -24 0.63 No 48 52.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 104006898 - NM_020139 BDH2 1 0.68 0.38 19 -14.14 63.54 33 8.52 Yes 20 1.08 Yes 0 0 No -32 0.82 Yes 38 81.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 104018912 - NM_020139 BDH2 1 0.55 0.28 18 3.51 73.23 30 7.81 Yes 17 1.43 Yes 29 0.95 Yes -29 0.87 Yes 41 87.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 104019960 - NM_020139 BDH2 1 2 0.99 39 3.25 72.33 22 5.88 Yes 61 0.28 No 26 0.5 Yes -21 0.61 No 49 43.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 70769284 + NM_018429 BDP1 1 0.18 0.13 8 6.99 85.02 18 5.39 No 5 1.1 Yes 0 0 No -17 0.61 No 53 80.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 70782357 + NM_018429 BDP1 1 0.37 0.22 13 7.6 87.73 30 6.93 Yes 17 1.24 Yes 0 0 No -29 0.93 Yes 41 93.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 70782357 + NM_018429 BDP1 1 5.29 3.31 69 7.6 87.73 30 6.93 Yes 17 1.24 Yes 0 0 No -29 0.93 Yes 41 93.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 70782361 + NM_018429 BDP1 1 0.7 0.43 24 -2.64 0 34 7.21 Yes 21 1.24 Yes 0 0 No -33 0.93 Yes 37 92.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 70783917 + NM_018429 BDP1 1 0.16 0.13 7 11.2 90.76 24 5.92 Yes 74 0.44 No 0 0 No -23 0.44 No 47 49.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 70784300 + NM_018429 BDP1 1 2.63 1.92 58 5.72 90.92 28 5.29 No 52 -0.38 No 0 0 No -27 0.72 Yes 43 61.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 70793630 + NM_018429 BDP1 1 1.13 0.83 38 2.97 0 32 5.89 Yes 36 0.89 Yes 0 0 No -31 0.52 No 39 46.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70809028 + NM_018429 BDP1 1 0.15 0.15 11 0.8 78.98 22 3.85 No 66 1.16 Yes 0 0 No -22 0.65 No 48 61.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70809033 + NM_018429 BDP1 1 0.65 0.58 35 -0.28 0 27 4.21 No 71 1.14 Yes 0 0 No -27 0.59 No 22 42.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70811912 + NM_018429 BDP1 1 0.44 0.32 19 2.55 75.94 21 5.58 Yes 48 0.36 No 0 0 No -20 0.82 Yes 50 72.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 70818142 + NM_018429 BDP1 1 1.25 1.19 41 3.74 71.63 17 5.55 No 52 1.19 Yes 0 0 No -27 0.57 No 43 33.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70819186 + NM_018429 BDP1 1 0.17 0.18 11 8.56 90.51 26 5.19 No 3 0.79 Yes 0 0 No -25 0.65 No 17 65.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70837283 + NM_018429 BDP1 1 3.38 1.29 54 7.67 89.58 30 7.65 Yes 17 0.77 No 26 0.82 Yes -29 0.89 Yes 41 79.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 70837338 + NM_018429 BDP1 1 0.56 0.19 13 3.33 80.22 20 4.9 No 25 1.18 Yes 0 0 No -19 0.24 No 51 32.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70840189 + NM_018429 BDP1 1 6.81 5.5 71 -2.59 0 10 3.39 No 13 0.41 No 0 0 No -31 0.64 No 39 61.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 70845255 + NM_018429 BDP1 1 0.22 0.17 12 -5.27 0 14 4.24 No 53 0.88 Yes 0 0 No -43 0.44 No 43 46.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70846313 + NM_018429 BDP1 1 3.11 1.5 55 11.48 94.82 33 6.52 Yes 20 0.43 No 0 0 No -32 0.75 Yes 38 76.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 70848920 + NM_018429 BDP1 1 0.47 0.25 12 -1.47 0 15 4.12 No 62 0.96 Yes 24 0.71 Yes -14 0.69 Yes 56 48.33 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 70855847 + NM_018429 BDP1 1 0.23 0.19 13 5.95 95.27 21 4.3 No 68 1.21 Yes 0 0 No -30 0.55 No 40 40.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70858601 + NM_018429 BDP1 1 34.82 17.94 72 4.17 81.08 22 4.96 No 27 0.53 No 22 0.93 Yes -22 0.87 Yes 48 76.86 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40963816 - NM_001314000 BECN1 1 1475.93 152.18 72 6.45 90.78 27 5.14 No 68 -2.31 No 26 0.78 Yes -24 0.86 Yes 46 86.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40963816 - NM_001314000 BECN1 1 3.34 0.38 22 6.45 90.78 27 5.14 No 68 -2.31 No 26 0.78 Yes -24 0.86 Yes 46 86.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40964375 - NM_001314000 BECN1 1 51.2 5.21 71 5.5 90.92 28 5.29 No 56 -0.57 No 27 0.66 Yes -27 0.46 No 43 44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 40967791 - NM_001314000 BECN1 1 0.8 1.5 57 5.66 80.47 23 5.08 No 62 0.94 Yes 23 0.85 Yes -23 0.54 No 47 59.22 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 107408938 - NM_001080450 BEND3 1 1.56 0.28 17 3.77 83.28 36 8.19 Yes 23 2.04 Yes 0 0 No -35 0.89 Yes 35 93.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42114855 - NM_001159547 BEND4 1 4.56 1.22 47 7.91 87.64 27 6.78 Yes 18 -1.38 No 0 0 No -26 0.95 Yes 44 96.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 42114855 - NM_001159547 BEND4 1 0.39 0.11 7 7.91 87.64 27 6.78 Yes 18 -1.38 No 0 0 No -26 0.95 Yes 44 96.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 42117128 - NM_001159547 BEND4 1 0.33 0.1 7 1.35 81.61 27 6.24 Yes 14 0.87 Yes 0 0 No -26 0.84 Yes 44 94.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42124537 - NM_001159547 BEND4 1 0.25 0.21 12 3.44 81.25 18 4.9 No 70 0.68 No 0 0 No -26 0.49 No 52 39.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42147704 - NM_001159547 BEND4 1 1.24 0.26 16 4.74 84.41 33 9.06 Yes 20 -0.2 No 0 0 No -32 0.51 No 38 70.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 205315 - NM_001098787 BET1L 1 0.36 0.29 17 8.98 93.69 39 8.59 Yes 26 1.36 Yes 0 0 No -23 0.64 No 32 84.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 206039 - NM_001098787 BET1L 1 4.56 2.72 65 3.71 0 25 4.42 No 32 1.44 Yes 0 0 No -24 0.93 Yes 46 90.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 206061 - NM_001098787 BET1L 1 2.13 1.22 49 0.72 74.01 23 6.46 Yes 10 1.1 Yes 19 0.6 Yes -22 0.96 Yes 48 95.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 14731795 + NM_016561 BFAR 1 1.74 2.28 56 10.36 92.78 28 5.64 Yes 15 0.8 Yes 0 0 No -27 0.71 Yes 43 82.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14759893 + NM_016561 BFAR 1 0.09 0.13 8 9.84 93.56 35 6.24 Yes 40 2.19 Yes 0 0 No -34 0.9 Yes 36 93.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 133185677 + NM_003571 BFSP2 1 2.31 0.24 13 -1.12 0 11 3.87 No 18 1.25 Yes 24 0.92 Yes -30 0.65 No 40 91.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 32260595 + NM_001003398 BICD1 1 21.26 7.13 71 9.38 92.09 27 4.6 No 69 1.69 Yes 22 0.89 Yes -22 0.79 Yes 48 65.29 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 32260824 + NM_001003398 BICD1 1 1.35 0.47 24 6.18 80.21 39 5.86 Yes 13 0.24 No 0 0 No -25 0.85 Yes 45 67.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 32261578 + NM_001003398 BICD1 1 0.3 0.13 8 7.42 84.17 38 8.82 Yes 43 0.53 No 24 0.57 Yes -32 0.38 No 38 47.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 32271726 + NM_001003398 BICD1 1 0.55 0.19 13 10.89 86.42 21 7.75 Yes 8 1.93 Yes 0 0 No -38 0.66 No 50 57.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 32370508 + NM_001003398 BICD1 1 1.6 0.35 17 0.71 60.89 33 5.74 Yes 20 0.4 No 0 0 No -32 0.91 Yes 38 92.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 32370676 + NM_001003398 BICD1 1 2.45 0.53 27 3.35 0 40 6.23 Yes 54 0.72 No 0 0 No -28 0.42 No 42 55.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 32375737 + NM_001003398 BICD1 1 3.57 0.86 37 10.2 90.72 30 4.58 No 68 -3.31 No 0 0 No -33 0.58 No 37 67.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 32376128 + NM_001003398 BICD1 1 9.16 2.03 58 9.98 92.73 33 8.43 Yes 20 1.01 Yes 0 0 No -32 0.85 Yes 38 94.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 32402403 + NM_001003398 BICD1 1 0.76 0.17 11 8.34 73.52 38 6.98 Yes 25 0.6 No 0 0 No -37 0.54 No 33 56.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 32457354 + NM_001003398 BICD1 1 1.22 0.46 19 9.42 78.37 44 6.71 Yes 31 1.62 Yes 0 0 No -33 0.55 No 37 69.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 32458597 + NM_001003398 BICD1 1 0.8 0.25 14 2.53 67.12 16 4.69 No 59 0.91 Yes 29 0.63 Yes -29 0.42 No 41 36.23 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 32485387 + NM_001003398 BICD1 1 14.14 2.03 61 4.39 82.96 21 3.95 No 12 0.68 No 20 0.72 Yes -20 0.78 Yes 46 60.19 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 32486171 + NM_001003398 BICD1 1 1.55 0.18 11 9.98 92.09 23 6.64 Yes 10 1.14 Yes 0 0 No -22 0.59 No 48 76.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 120430223 + NM_207311 BICDL1 1 0.81 0.17 9 10.89 87.72 46 6.31 Yes 33 1.14 Yes 24 0.69 Yes -24 0.77 Yes 46 82.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 120437402 + NM_207311 BICDL1 1 1.15 0.32 20 6.89 80.04 28 6.15 Yes 15 0.82 Yes 0 0 No -27 0.48 No 43 57.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 120437564 + NM_207311 BICDL1 1 4.31 1.35 47 7.71 79.16 32 7.06 Yes 4 0.32 No 31 0.79 Yes -31 0.91 Yes 39 86.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 120437598 + NM_207311 BICDL1 1 0.36 0.17 10 4.6 84.45 28 5.19 No 38 0.33 No 0 0 No -27 0.87 Yes 43 87.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 120451967 + NM_207311 BICDL1 1 1.52 0.49 21 7.14 91.26 26 4.28 No 27 0.77 Yes 0 0 No -26 0.85 Yes 44 85.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120499546 + NM_207311 BICDL1 1 0.69 0.24 14 5.15 85.84 21 5 No 76 0.82 Yes 0 0 No -20 0.89 Yes 50 79.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120509476 + NM_207311 BICDL1 1 1.24 0.26 16 9.3 82.03 27 5.48 No 63 0.81 Yes 21 0.62 Yes -26 0.92 Yes 44 87.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 120527758 + NM_207311 BICDL1 1 0.92 0.19 12 -3.15 0 27 6.86 Yes 14 1 Yes 0 0 No -26 0.94 Yes 44 91.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120528714 + NM_207311 BICDL1 1 0.29 0.11 8 7.18 81.41 34 7.75 Yes 21 2.57 Yes 33 0.96 Yes -33 0.86 Yes 37 95.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 120529050 + NM_207311 BICDL1 1 0.61 0.28 17 9.04 78.24 25 6.16 Yes 12 1.58 Yes 24 0.98 Yes -24 0.92 Yes 46 94.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 18222943 - NM_001244567 BID 1 0.1 0.22 14 3.39 90.66 13 3.76 No 27 -2.47 No 21 0.87 Yes -21 0.92 Yes 49 89.79 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 18232750 - NM_001244567 BID 1 0.08 0.14 8 6.33 75.02 30 3.84 No 11 1.19 Yes 0 0 No -23 0.83 Yes 47 85.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43511005 + NM_001197 BIK 1 0.29 0.17 10 10.96 88.3 21 5.57 Yes 8 1.92 Yes 0 0 No -20 0.79 Yes 50 80.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43520054 + NM_001197 BIK 1 3.05 1.4 52 -1.14 0 20 4.05 No 7 0.48 No 0 0 No -19 0.84 Yes 51 50.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 127808820 - NM_001320634 BIN1 1 120.69 17.13 71 6.3 85.1 27 5.2 No 14 0.26 No 26 0.95 Yes -26 0.89 Yes 44 94.88 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 127809939 - NM_001320634 BIN1 1 0.95 0.14 8 4.27 75.11 92 10.39 Yes 59 1.64 Yes 29 0.11 Yes -41 0.55 No 19 22.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 127815178 - NM_001320634 BIN1 1 69.59 8.97 72 6.01 71.83 89 10.27 Yes 76 2.16 Yes 19 0.82 Yes -19 0.85 Yes 51 83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 127820611 - NM_001320634 BIN1 1 0.17 0.15 8 3.82 79.19 20 4.26 No 68 0.95 Yes 0 0 No -26 0.76 Yes 44 70.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 127825832 - NM_001320634 BIN1 1 2.39 1.47 45 5.1 78.12 77 11.74 Yes 3 1.7 Yes 31 0.6 Yes -31 0.49 No 39 71.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 51681817 - NM_001290007 BIN2 1 1.13 0.82 32 9.18 94.82 23 7.91 Yes 33 1.12 Yes 0 0 No -26 0.62 No 44 75.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 51686123 - NM_001290007 BIN2 1 0.18 0.14 8 -1.39 0 9 3.87 No 12 1.03 Yes 28 0.12 Yes -30 0.48 No 46 45.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 51686126 - NM_001290007 BIN2 1 4.97 4.35 69 5.54 88.83 22 4.8 No 9 1.04 Yes 28 0.12 Yes -27 0.64 No 43 48.45 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 51696389 - NM_001290007 BIN2 1 0.31 0.19 12 0.83 76.54 22 4.34 No 32 1.28 Yes 0 0 No -21 0.89 Yes 49 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 51696403 - NM_001290007 BIN2 1 1.01 0.61 31 -1.87 0 31 6.4 Yes 18 1.3 Yes 0 0 No -30 0.9 Yes 40 79.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 51696922 - NM_001290007 BIN2 1 0.42 0.28 13 2.27 0 29 6.23 Yes 73 1.53 Yes 0 0 No -28 0.85 Yes 42 96.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22480211 - NM_018688 BIN3 1 0.51 0.4 21 9.49 90.38 76 8.34 Yes 35 1.42 Yes 23 0.72 Yes -29 0.78 Yes 23 74.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 22492039 - NM_018688 BIN3 1 0.34 0.29 17 6.5 81.4 29 6.18 Yes 16 0.41 No 28 0.63 Yes -23 0.65 No 42 57.88 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 22494177 - NM_018688 BIN3 1 0.24 0.17 10 9.75 88.8 23 5.82 Yes 76 0.09 No 0 0 No -30 0.5 No 40 58.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 22505474 - NM_018688 BIN3 1 0.25 0.14 10 6.35 83.74 27 6.16 Yes 14 1.31 Yes 0 0 No -26 0.9 Yes 44 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 102230220 + NM_001256163 BIRC2 1 0.56 0.79 33 8.46 89.04 22 5 No 9 1.03 Yes 0 0 No -21 0.86 Yes 49 95.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 102248409 + NM_001256163 BIRC2 1 1.14 1.25 52 3.73 81.68 23 5.67 Yes 73 -3.03 No 0 0 No -22 0.92 Yes 48 90.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 102248554 + NM_001256163 BIRC2 1 0.23 0.31 15 1.05 0 15 4.58 No 2 0.62 No 26 0.9 Yes -14 0.25 No 56 48.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 102190607 + NM_001165 BIRC3 1 5.66 6.88 71 5.26 78.92 36 6.99 Yes 23 0.37 No 25 0.41 Yes -25 0.51 No 35 86.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 102190651 + NM_001165 BIRC3 1 0.36 0.51 27 -0.91 0 35 6.5 Yes 67 0.36 No 0 0 No -27 0.33 No 36 48.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 102192110 + NM_001165 BIRC3 1 0.15 0.14 7 1.09 0 44 6.51 Yes 31 0.08 No 0 0 No -28 0.75 Yes 42 71.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 102196173 + NM_001165 BIRC3 1 0.36 0.99 40 0.8 67.83 16 5.1 No 48 0.4 No 28 0.84 Yes -32 0.64 No 43 27.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 102197459 + NM_001165 BIRC3 1 0.21 0.92 43 5.33 83.78 39 7.41 Yes 26 1 Yes 34 0.85 Yes -34 0.57 No 36 86.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 102198784 + NM_001165 BIRC3 1 0.04 0.19 11 -15.7 0 35 8.94 Yes 15 0.94 Yes 0 0 No -27 0.42 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 102206772 + NM_001165 BIRC3 1 0.13 0.61 32 2.9 62.73 27 7.15 Yes 5 0.84 Yes 0 0 No -26 0.73 Yes 44 63.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 102207464 + NM_001165 BIRC3 1 0.03 0.24 12 3.43 79.44 17 5.07 No 4 1.6 Yes 24 0.87 Yes -23 0.75 Yes 47 76.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 102207498 + NM_001165 BIRC3 1 0.26 1.57 50 2.67 0 11 4.12 No 20 1.65 Yes 0 0 No -32 0.52 No 38 70.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 76218908 + NM_001012271 BIRC5 1 0.08 0.24 15 7.37 83.44 25 7.16 Yes 12 1.56 Yes 24 0.88 Yes -24 0.88 Yes 46 90.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 76216827 + NM_001012271 BIRC5 1 0.05 0.18 10 -4.78 0 30 6.59 Yes 17 0.74 No 0 0 No -30 0.35 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76218908 + NM_001012271 BIRC5 1 0.57 1.6 50 7.37 83.44 25 7.16 Yes 12 1.56 Yes 24 0.88 Yes -24 0.88 Yes 46 90.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 32583345 + NM_016252 BIRC6 1 0.76 0.79 38 10.14 89.41 33 5.83 Yes 20 1.01 Yes 0 0 No -27 0.66 Yes 43 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32611536 + NM_016252 BIRC6 1 0.19 0.42 22 9.9 96.29 37 6.33 Yes 40 0.86 Yes 0 0 No -36 0.47 No 34 67.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32617091 + NM_016252 BIRC6 1 0.31 0.36 18 -0.59 65.8 48 4.66 No 64 0.82 Yes 23 0.6 Yes -24 0.49 No 53 32.73 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 32621812 + NM_016252 BIRC6 1 1.25 2.32 61 11.2 94.5 30 6.36 Yes 8 0.62 No 0 0 No -29 0.83 Yes 41 92.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32625047 + NM_016252 BIRC6 1 0.58 1.03 40 7.58 85.04 27 6.16 Yes 14 1.14 Yes 0 0 No -26 0.93 Yes 44 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32626200 + NM_016252 BIRC6 1 0.09 0.18 11 4.86 82.19 18 5.84 Yes 5 0.81 Yes 28 0.54 Yes -29 0.54 No 41 41.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 32633060 + NM_016252 BIRC6 1 0.07 0.17 8 2.56 0 52 7.45 Yes 39 0.25 No 0 0 No -43 0.82 Yes 27 81.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32633365 + NM_016252 BIRC6 1 0.18 0.32 16 4.38 83 31 6.08 Yes 57 -1.37 No 0 0 No -28 0.7 Yes 42 70.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32640357 + NM_016252 BIRC6 1 0.14 0.32 19 9.16 86.48 21 4.2 No 8 0.68 No 0 0 No -26 0.8 Yes 44 86.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32655935 + NM_016252 BIRC6 1 0.06 0.13 7 -20.45 59.12 77 7.79 Yes 71 1.23 Yes 0 0 No -28 0.6 No 59 20.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32658717 + NM_016252 BIRC6 1 0.92 1.11 47 -1.98 0 11 2.92 No 40 0.36 No 0 0 No -34 0.76 Yes 36 70.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32660521 + NM_016252 BIRC6 1 68.32 41.4 72 9 86.5 18 5.67 Yes 5 1.37 Yes 19 0.46 Yes -21 0.49 No 44 49.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 32664740 + NM_016252 BIRC6 1 0.07 0.11 7 1.63 73.7 37 6.19 Yes 11 0.89 Yes 0 0 No -23 0.58 No 34 71.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 32667198 + NM_016252 BIRC6 1 0.94 1.64 54 7.07 84.38 14 5.19 No 1 0.99 Yes 0 0 No -28 0.86 Yes 42 93.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32669121 + NM_016252 BIRC6 1 0.32 0.31 16 9.15 83.21 28 5.83 Yes 24 0.44 No 0 0 No -27 0.4 No 44 69.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32671359 + NM_016252 BIRC6 1 0.25 0.31 15 9.75 81.64 30 6.63 Yes 17 1.1 Yes 0 0 No -29 0.74 Yes 41 77.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32673842 + NM_016252 BIRC6 1 0.34 0.4 22 -8.57 0 17 4.58 No 24 0.39 No 22 0.66 Yes -16 0.52 No 54 34.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 32674301 + NM_016252 BIRC6 1 0.14 0.13 8 6.54 79.56 31 4.86 No 72 1.37 Yes 0 0 No -30 0.85 Yes 40 88.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32685391 + NM_016252 BIRC6 1 0.13 0.11 7 5.08 85.55 26 5.1 No 13 0.51 No 0 0 No -25 0.65 No 16 31.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32694480 + NM_016252 BIRC6 1 6.1 9.1 72 6.35 87.01 23 5.2 No 10 0.53 No 0 0 No -23 0.52 No 48 57.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32704509 + NM_016252 BIRC6 1 0.12 0.22 13 4.82 75.29 37 6.34 Yes 65 -5.52 No 26 0.83 Yes -32 0.54 No 38 84.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 32707475 + NM_016252 BIRC6 1 0.09 0.13 8 -2.28 59.25 27 4.95 No 39 -4.51 No 25 0.66 Yes -26 0.71 Yes 44 37.92 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 32710544 + NM_016252 BIRC6 1 0.46 0.63 30 11.23 84.97 90 8.45 Yes 21 0.98 Yes 0 0 No -33 0.38 No 37 57.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32716548 + NM_016252 BIRC6 1 2.05 2.74 69 9.74 89.41 16 4.92 No 3 0.84 Yes 0 0 No -30 0.63 No 40 88.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 32726782 + NM_016252 BIRC6 1 0.16 0.21 12 -7.87 79.7 29 8.3 Yes 16 0.72 No 0 0 No -29 0.51 No 42 48.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32733030 + NM_016252 BIRC6 1 0.14 0.18 12 6.31 74.95 35 5.94 Yes 59 0.28 No 25 0.65 Yes -34 0.49 No 36 52.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 32734849 + NM_016252 BIRC6 1 0.13 0.15 8 -0.19 67.75 34 5.94 Yes 60 0.27 No 0 0 No -22 0.69 Yes 37 50.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 32734904 + NM_016252 BIRC6 1 0.2 0.26 14 6.05 82.31 12 5.79 Yes -1 0.67 No 0 0 No -22 0.69 Yes 48 72.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32735652 + NM_016252 BIRC6 1 0.14 0.22 13 5.77 68.39 29 6.4 Yes 0 0.93 Yes 0 0 No -28 0.84 Yes 42 80.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32735602 + NM_016252 BIRC6 1 0.2 0.32 17 -3.42 0 13 4.36 No 43 1.12 Yes 0 0 No -43 0.69 Yes 27 85.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32735652 + NM_016252 BIRC6 1 4.09 6.15 72 5.77 68.39 29 6.4 Yes 0 0.93 Yes 0 0 No -28 0.84 Yes 42 80.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32738006 + NM_016252 BIRC6 1 0.94 1.28 48 -1.19 0 11 3.27 No 58 -3 No 0 0 No -31 0.75 Yes 39 90.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32738145 + NM_016252 BIRC6 1 1.21 1.63 52 3.98 75.42 32 7.21 Yes 19 1.79 Yes 0 0 No -31 0.84 Yes 39 82.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32740795 + NM_016252 BIRC6 1 0.09 0.11 7 10.28 88.44 30 5.91 Yes 61 -3.36 No 34 0.22 Yes -22 0.69 Yes 41 68.89 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 32746728 + NM_016252 BIRC6 1 0.9 1.13 45 7.75 85.86 28 7.68 Yes 15 1.54 Yes 0 0 No -27 0.93 Yes 43 95.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32746731 + NM_016252 BIRC6 1 0.98 1.24 50 5.79 87 31 7.87 Yes 18 1.52 Yes 0 0 No -30 0.93 Yes 40 95.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32751544 + NM_016252 BIRC6 1 0.08 0.13 8 7.77 78.69 15 5.29 No 56 -2.11 No 0 0 No -29 0.3 No 39 27.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32754788 + NM_016252 BIRC6 1 0.13 0.24 13 3.96 74.29 31 5.94 Yes 36 1.27 Yes 0 0 No -30 0.78 Yes 40 79.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32770773 + NM_016252 BIRC6 1 0.08 0.11 8 6.96 73.21 38 4.91 No 76 0.6 No 0 0 No -29 0.62 No 28 50.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32772922 + NM_016252 BIRC6 1 0.79 1.54 57 2.55 0 15 3.8 No 22 1.12 Yes 0 0 No -34 0.76 Yes 36 84.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32800516 + NM_016252 BIRC6 1 0.65 0.78 35 9.42 92.68 27 7.81 Yes 31 1.33 Yes 0 0 No -21 0.4 No 44 62.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32809806 + NM_016252 BIRC6 1 0.21 0.26 14 6.97 94.44 24 5.14 No 51 1.03 Yes 0 0 No -23 0.76 Yes 47 76.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32815872 + NM_016252 BIRC6 1 6.32 7.26 72 8.6 94.31 25 5.57 Yes 75 -4.63 No 24 0.77 Yes -24 0.9 Yes 46 93.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 32815877 + NM_016252 BIRC6 1 0.07 0.1 7 1.54 0 30 6 Yes 69 -2.59 No 0 0 No -29 0.86 Yes 41 94.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32822891 + NM_016252 BIRC6 1 0.14 0.17 9 4.01 79.45 22 4.61 No 64 -6.18 No 0 0 No -27 0.71 Yes 43 63.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 32824799 + NM_016252 BIRC6 1 0.1 0.13 9 -0.44 0 27 5.38 No 14 0.82 Yes 32 0.85 Yes -26 0.8 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 32826311 + NM_016252 BIRC6 1 0.18 0.19 13 9.93 89.34 28 8.92 Yes 15 1.36 Yes 0 0 No -27 0.89 Yes 43 90.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32826752 + NM_016252 BIRC6 1 1.35 1.75 55 2.7 81.34 24 5.18 No 11 0.74 No 0 0 No -23 0.95 Yes 47 94.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32828455 + NM_016252 BIRC6 1 0.5 0.61 30 9.06 82.25 33 6.43 Yes 20 0.96 Yes 0 0 No -32 0.72 Yes 38 69.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 17517350 + NR_130765 BISPR 1 2.11 0.61 30 10.04 93.82 36 5.8 Yes 43 1.2 Yes 0 0 No -28 0.5 No 44 75.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17520749 + NR_130765 BISPR 1 0.63 0.17 10 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -16 0.47 No 54 70.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17522351 + NR_130765 BISPR 1 1.76 0.5 26 8.41 86.44 22 6.71 Yes 9 1.34 Yes 0 0 No -21 0.85 Yes 49 89.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17526008 + NR_130765 BISPR 1 0.87 0.31 16 4.71 71.71 45 7.05 Yes 58 2.44 Yes 0 0 No -44 0.56 No 26 87.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17525178 + NR_130765 BISPR 1 0.83 0.35 21 8.22 80.18 38 5.48 No 48 1.04 Yes 25 0.85 Yes -24 0.49 No 46 65.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 17526008 + NR_130765 BISPR 1 4.49 1.78 52 4.71 71.71 45 7.05 Yes 58 2.44 Yes 0 0 No -44 0.56 No 26 87.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 103506327 + NM_001204425 BIVM-ERCC5 1 0.14 0.13 7 7.85 82.05 46 6.46 Yes 5 0.93 Yes 0 0 No -35 0.29 No 35 51.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 103507624 + NM_001204425 BIVM-ERCC5 1 0.16 0.15 11 4.09 83.95 27 6.86 Yes 14 1.22 Yes 0 0 No -26 0.96 Yes 44 95.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 11412899 + NM_001330465 BLK 1 0.15 0.11 8 8.85 74.23 31 6.56 Yes 18 2.13 Yes 0 0 No -30 0.91 Yes 40 92.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 11413094 + NM_001330465 BLK 1 3.2 1.57 50 8.64 82.1 24 4.69 No 31 0.32 No 0 0 No -23 0.93 Yes 47 93.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 11413097 + NM_001330465 BLK 1 2.68 1.46 42 1.76 67.83 27 4.93 No 4 0.33 No 0 0 No -26 0.93 Yes 44 93.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 11415931 + NM_001330465 BLK 1 0.36 0.28 14 9.59 78 19 6.18 Yes 6 1.73 Yes 0 0 No -35 0.64 No 52 74.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 11417113 + NM_001330465 BLK 1 0.9 0.44 23 11.73 85.99 50 7.28 Yes -3 0.13 No 0 0 No -38 0.51 No 32 58.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 11420466 + NM_001330465 BLK 1 0.3 0.19 12 2.62 66.28 22 5.92 Yes 60 -4.03 No 25 0.56 Yes -21 0.33 No 49 18.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 91261685 + NM_001287247 BLM 1 0.81 0.28 14 8.09 78.29 26 5.3 No 75 1.83 Yes 0 0 No -25 0.88 Yes 45 92.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91267264 + NM_001287247 BLM 1 15.4 5.28 71 9.01 93.89 70 8.05 Yes 57 0.8 Yes 0 0 No -28 0.31 No 42 59.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91277539 + NM_001287247 BLM 1 1.47 0.47 28 4.17 84.41 28 6.79 Yes 15 0.91 Yes 0 0 No -27 0.54 No 43 68.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91293562 + NM_001287247 BLM 1 0.3 0.15 9 7.95 80.8 24 5.08 No 32 0.5 No 0 0 No -22 0.55 No 48 63.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 91303380 + NM_001287247 BLM 1 1.34 0.74 32 -1.71 0 25 6.54 Yes 12 0.38 No 0 0 No -24 0.92 Yes 46 89.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 91303826 + NM_001287247 BLM 1 0.21 0.13 8 5.63 80.9 31 6.41 Yes 33 0.75 No 0 0 No -30 0.46 No 33 52.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 91314854 + NM_001287247 BLM 1 0.24 0.21 13 4.43 0 38 6.89 Yes 64 1.34 Yes 0 0 No -31 0.63 No 39 63.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91320988 + NM_001287247 BLM 1 0.66 0.57 29 9.78 88.68 32 5.83 Yes 57 0.03 No 0 0 No -31 0.58 No 39 73.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 91328181 + NM_001287247 BLM 1 0.14 0.11 8 6.74 91.13 18 4.13 No 41 0.61 No 0 0 No -24 0.9 Yes 46 93.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 91328181 + NM_001287247 BLM 1 0.24 0.24 13 6.74 91.13 18 4.13 No 41 0.61 No 0 0 No -24 0.9 Yes 46 93.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 91328798 + NM_001287247 BLM 1 0.99 0.47 23 0.78 0 34 7.55 Yes 21 1.65 Yes 0 0 No -33 0.86 Yes 37 90.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91334369 + NM_001287247 BLM 1 0.22 0.15 8 11.4 91.77 35 5.99 Yes 22 1.1 Yes 0 0 No -34 0.62 No 36 58.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 28588783 - NM_000386 BLMH 1 0.31 0.46 25 7.56 78.25 21 6.36 Yes 8 0.81 Yes 0 0 No -28 0.47 No 42 70.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 28591035 - NM_000386 BLMH 1 0.05 0.1 7 7.4 89.67 33 5.06 No 64 -4.64 No 0 0 No -29 0.57 No 33 50.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 28600498 - NM_000386 BLMH 1 0.28 0.58 32 7.06 88.41 24 4.67 No 32 0.61 No 23 0.96 Yes -23 0.91 Yes 47 94.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 28613920 - NM_000386 BLMH 1 0.06 0.14 10 -11.77 0 26 5.19 No 30 1.31 Yes 0 0 No -25 0.88 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 97953032 - NM_001114094 BLNK 1 0.07 0.29 19 4.63 70.8 30 5.58 Yes 17 1.13 Yes 0 0 No -24 0.46 No 46 71.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 97959290 - NM_001114094 BLNK 1 0.26 1.15 45 9.23 82.78 30 7.01 Yes 17 0.89 Yes 29 0.93 Yes -29 0.95 Yes 41 90.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 97960743 - NM_001114094 BLNK 1 0.03 0.11 7 7.04 86.02 16 5.84 Yes 3 1.22 Yes 0 0 No -20 0.55 No 42 58.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 97964371 - NM_001114094 BLNK 1 0.03 0.17 10 -13.9 0 26 5.38 No 13 0.72 No 0 0 No -25 0.48 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 97964372 - NM_001114094 BLNK 1 0.11 0.6 30 -15.6 0 25 5.33 No 12 0.73 No 0 0 No -24 0.44 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 97965724 - NM_001114094 BLNK 1 0.1 0.47 24 9.98 86.86 37 6.56 Yes 72 0.8 Yes 0 0 No -36 0.84 Yes 34 82.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97969494 - NM_001114094 BLNK 1 0.26 1.01 43 4.2 86.91 24 4.89 No 35 1.11 Yes 0 0 No -23 0.93 Yes 47 95.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97975089 - NM_001114094 BLNK 1 0.18 0.24 14 9.7 88.58 21 6.17 Yes 8 1.1 Yes 0 0 No -20 0.9 Yes 50 85.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97975146 - NM_001114094 BLNK 1 338.17 413.11 72 7.45 78.99 87 8.44 Yes 41 0.95 Yes 21 0.51 Yes -21 0.36 No 49 44.82 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 97976508 - NM_001114094 BLNK 1 0.04 0.19 11 6.66 88.67 26 5 No 56 1.34 Yes 23 0.93 Yes -18 0.53 No 52 44.75 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 97983236 - NM_001114094 BLNK 1 0.18 0.86 39 7.25 80.25 59 8.01 Yes 46 1.41 Yes 0 0 No -37 0.53 No 33 68.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 97987395 - NM_001114094 BLNK 1 0.02 0.1 7 5.23 77.61 20 5.18 No 7 0.77 Yes 0 0 No -36 0.62 No 34 75.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 97990589 - NM_001114094 BLNK 1 0.1 0.58 29 -10.38 68.77 39 7.09 Yes 26 1.72 Yes 0 0 No -38 0.96 Yes 32 97.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97998128 - NM_001114094 BLNK 1 0.29 1.63 52 9.02 87.57 16 7.02 Yes 40 0.38 No 0 0 No -24 0.79 Yes 46 72.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97998921 - NM_001114094 BLNK 1 0.26 1.38 45 10.66 93.23 25 5.48 No 62 1.71 Yes 24 0.8 Yes -24 0.51 No 46 66.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 98004956 - NM_001114094 BLNK 1 0.02 0.13 7 5.33 77.92 34 4.47 No 47 0.19 No 0 0 No -27 0.35 No 50 45.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 98006802 - NM_001114094 BLNK 1 0.04 0.25 15 2.2 0 35 7.02 Yes 22 0.75 No 0 0 No -34 0.7 Yes 36 80.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 98016898 - NM_001114094 BLNK 1 0.89 4.32 65 4.17 76.32 52 7.75 Yes 67 1.22 Yes 0 0 No -26 0.9 Yes 44 88.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 98025941 - NM_001114094 BLNK 1 0.07 0.36 21 13.77 97.24 30 5.82 Yes 67 -3.25 No 0 0 No -29 0.96 Yes 41 97.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56113195 + NR_037656 BLOC1S1 1 0.1 0.32 18 -1.75 0 14 4.36 No 46 -4.46 No 0 0 No -17 0.59 No 53 38.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56113220 + NR_037656 BLOC1S1 1 0.09 0.28 16 3.64 75.58 16 4.72 No 71 -6.02 No 0 0 No -19 0.48 No 52 53.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 102035251 - NM_001282439 BLOC1S2 1 4220.48 364.5 72 8.84 84.18 22 5.49 No 9 1.47 Yes 22 0.73 Yes -21 0.5 No 49 56.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 102035251 - NM_001282439 BLOC1S2 1 2.96 0.24 14 8.84 84.18 22 5.49 No 9 1.47 Yes 22 0.73 Yes -21 0.5 No 49 56.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 102038136 - NM_001282439 BLOC1S2 1 3.1 0.29 15 11.2 93.03 37 7.86 Yes 24 1.29 Yes 0 0 No -36 0.81 Yes 34 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 102040296 - NM_001282439 BLOC1S2 1 0.1 0.4 21 12.02 90.66 31 7.59 Yes 18 1.77 Yes 0 0 No -26 0.92 Yes 44 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 102040804 - NM_001282439 BLOC1S2 1 0.11 0.39 22 -2.69 0 17 4 No 67 0.47 No 0 0 No -39 0.58 No 42 52.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 102042771 - NM_001282439 BLOC1S2 1 1.4 5.17 70 4.54 76.17 21 5.57 Yes 30 -1.74 No 0 0 No -20 0.6 No 45 83.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 102046090 - NM_001282439 BLOC1S2 1 1.22 2.71 54 2.61 69.53 22 5.2 No 29 -3.18 No 25 0.76 Yes -25 0.6 No 53 34.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 7884743 - NR_037616 BLOC1S5-TXNDC5 1 0.01 0.18 10 -2.07 62.06 20 4.65 No 68 1.41 Yes 0 0 No -19 0.5 No 33 41.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 7885766 - NR_037616 BLOC1S5-TXNDC5 1 0.03 0.44 20 6.04 85.02 23 5.2 No 37 0.64 No 0 0 No -22 0.45 No 48 59.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 7889205 - NR_037616 BLOC1S5-TXNDC5 1 0.02 0.24 12 3.28 70.84 42 6.45 Yes 47 0.59 No 0 0 No -41 0.36 No 29 70.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 7891663 - NR_037616 BLOC1S5-TXNDC5 1 0.09 1.15 44 8.34 84.57 29 5.38 No 71 0.8 Yes 0 0 No -28 0.79 Yes 42 92.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 7895137 - NR_037616 BLOC1S5-TXNDC5 1 0.2 3.01 60 9.93 80.05 36 5.85 Yes 23 0.95 Yes 0 0 No -35 0.81 Yes 35 78.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 7895434 - NR_037616 BLOC1S5-TXNDC5 1 0.01 0.21 12 -9.07 0 37 8.77 Yes 24 1.58 Yes 0 0 No -25 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 7899419 - NR_037616 BLOC1S5-TXNDC5 1 0.02 0.38 16 7.49 82.3 52 5.34 No 14 1.35 Yes 0 0 No -26 0.92 Yes 44 88.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 8027633 - NR_037616 BLOC1S5-TXNDC5 1 6.52 4.46 70 10.61 91.9 26 4.31 No 23 0.95 Yes 0 0 No -22 0.54 No 48 75.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 8027633 - NR_037616 BLOC1S5-TXNDC5 1 0.23 0.17 11 10.61 91.9 26 4.31 No 23 0.95 Yes 0 0 No -22 0.54 No 48 75.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 8040474 - NR_037616 BLOC1S5-TXNDC5 1 0.23 0.15 10 9.64 81.33 29 4.88 No 58 1.21 Yes 0 0 No -28 0.24 No 39 43.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 45890077 + NR_132356 BLOC1S6 1 0.31 0.32 19 5.82 74.72 45 7.95 Yes 32 0.63 No 44 0.58 Yes -44 0.64 No 26 77.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 45890077 + NR_132356 BLOC1S6 1 1 1.08 47 5.82 74.72 45 7.95 Yes 32 0.63 No 44 0.58 Yes -44 0.64 No 26 77.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 45893431 + NR_132356 BLOC1S6 1 1.22 1.42 47 5.78 68.16 74 5.86 Yes 9 1.23 Yes 21 0.87 Yes -35 0.69 Yes 35 86.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 45895301 + NR_132356 BLOC1S6 1 9.1 10.08 72 4.03 0 30 5.97 Yes 73 0.66 No 31 0.2 Yes -37 0.45 No 29 57.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 43832317 + NM_001253823 BLVRA 1 0.2 0.24 12 -2.16 0 47 6.86 Yes 75 0.92 Yes 0 0 No -46 0.82 Yes 24 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40961852 - NM_000713 BLVRB 1 0.16 0.13 7 3.66 80.12 20 5.99 Yes 7 1.16 Yes 0 0 No -30 0.62 No 51 64.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169346375 + NM_003666 BLZF1 1 1.03 0.5 24 8.2 86.64 36 4.6 No 0 1.13 Yes 0 0 No -21 0.45 No 35 54.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40386077 - NM_033503 BMF 1 0.48 0.32 19 6.62 88.89 22 8.02 Yes 9 1.3 Yes 0 0 No -21 0.79 Yes 49 90.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40386077 - NM_033503 BMF 1 0.19 0.13 8 6.62 88.89 22 8.02 Yes 9 1.3 Yes 0 0 No -21 0.79 Yes 49 90.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40393957 - NM_033503 BMF 1 0.31 0.24 13 7.35 72.59 32 7.35 Yes 1 2.33 Yes 0 0 No -31 0.8 Yes 39 73.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 79754739 + NM_198892 BMP2K 1 0.07 0.1 7 0.7 0 25 6.16 Yes 47 1.42 Yes 0 0 No -31 0.63 No 39 64.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 79766085 + NM_198892 BMP2K 1 1.23 1.71 58 1.13 0 28 6.17 Yes 69 1.23 Yes 0 0 No -27 0.91 Yes 43 87.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 79766169 + NM_198892 BMP2K 1 0.17 0.22 16 2.25 65.52 25 6.4 Yes 12 1 Yes 0 0 No -24 0.89 Yes 46 87.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 79768362 + NM_198892 BMP2K 1 0.91 1.56 54 5 82.32 30 5.47 No 21 0.82 Yes 0 0 No -29 0.77 Yes 41 70.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 79773777 + NM_198892 BMP2K 1 0.56 0.69 33 7.05 82.23 43 6.47 Yes 70 1.14 Yes 0 0 No -31 0.67 Yes 39 60.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 79793800 + NM_198892 BMP2K 1 0.2 0.31 18 5.22 88.38 21 4.9 No 74 0.51 No 0 0 No -20 0.85 Yes 50 85.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 79793803 + NM_198892 BMP2K 1 0.13 0.14 9 4.24 83.49 24 5.2 No 43 0.39 No 0 0 No -23 0.85 Yes 47 82.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 79808331 + NM_198892 BMP2K 1 0.27 0.17 9 1.43 0 64 5.7 Yes 51 0.52 No 0 0 No -41 0.65 No 29 61.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 79808331 + NM_198892 BMP2K 1 0.45 0.32 20 1.43 0 64 5.7 Yes 51 0.52 No 0 0 No -41 0.65 No 29 61.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 79809153 + NM_198892 BMP2K 1 1.72 0.89 40 8.78 93.26 29 5.92 Yes 35 1.47 Yes 0 0 No -28 0.9 Yes 42 95.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 88603162 + NM_004329 BMPR1A 1 38.23 9.89 71 10.16 98.88 16 5.3 No 76 1.1 Yes 24 0.49 Yes -19 0.6 No 51 75.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 88611234 + NM_004329 BMPR1A 1 1.05 0.22 13 3.61 66 28 6.06 Yes 15 0.55 No 0 0 No -27 0.78 Yes 43 89.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88649823 + NM_004329 BMPR1A 1 0.39 0.19 10 -2.59 0 37 5.53 No 76 0.6 No 0 0 No -28 0.78 Yes 42 92.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88660213 + NM_004329 BMPR1A 1 0.62 0.22 15 6.18 79.2 36 7.71 Yes 62 0.99 Yes 0 0 No -36 0.75 Yes 34 67.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 88663393 + NM_004329 BMPR1A 1 0.57 0.17 11 0.18 0 52 5.36 No 45 0.4 No 0 0 No -28 0.79 Yes 42 55.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 203265057 + NM_001204 BMPR2 1 0.94 0.58 26 7.2 87 28 6.24 Yes 15 1.4 Yes 0 0 No -27 0.86 Yes 43 93.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203308307 + NM_001204 BMPR2 1 0.23 0.13 8 7.32 84.59 106 12.07 Yes NA NA NA 0 0 No -40 0.1 No 29 17.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 203321258 + NM_001204 BMPR2 1 0.5 0.28 17 10.72 95.65 45 6.86 Yes 32 0.25 No 0 0 No -40 0.7 Yes 30 78.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 203339430 + NM_001204 BMPR2 1 0.14 0.1 7 6.58 80.12 24 7.42 Yes 11 1.24 Yes 23 0.88 Yes -23 0.92 Yes 47 94.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 203352816 + NM_001204 BMPR2 1 0.31 0.24 14 9.24 86.39 54 4.75 No 13 0.71 No 0 0 No -29 0.88 Yes 41 81.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 203353744 + NM_001204 BMPR2 1 0.31 0.19 11 6.4 88.76 23 6.85 Yes 72 1.14 Yes 0 0 No -22 0.49 No 26 49.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 203379613 + NM_001204 BMPR2 1 0.37 0.31 17 -7.16 75.17 25 5.92 Yes 12 1.82 Yes 0 0 No -25 0.51 No 43 44.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 203424421 + NM_001204 BMPR2 1 1.4 0.69 32 6.16 88.72 28 5.24 No 47 1.47 Yes 0 0 No -27 0.9 Yes 43 92.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203424421 + NM_001204 BMPR2 1 3.41 1.67 50 6.16 88.72 28 5.24 No 47 1.47 Yes 0 0 No -27 0.9 Yes 43 92.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 43288410 + NM_014753 BMS1 1 0.06 0.11 7 -0.24 0 9 3.87 No 37 1.71 Yes 0 0 No -34 0.59 No 36 79.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 43288446 + NM_014753 BMS1 1 0.51 0.9 36 4.3 0 19 4.47 No 73 1.72 Yes 0 0 No -18 0.89 Yes 52 90.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 43290953 + NM_014753 BMS1 1 1.49 2.38 66 9.81 88.27 21 5.66 Yes 8 1.28 Yes 0 0 No -20 0.68 Yes 50 79.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 43297435 + NM_014753 BMS1 1 0.09 0.14 9 7.2 79.27 40 6.51 Yes 27 0.97 Yes 0 0 No -40 0.79 Yes 30 87.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 43305426 + NM_014753 BMS1 1 0.07 0.17 11 10.51 88.27 28 7.61 Yes 15 1.6 Yes 0 0 No -27 0.93 Yes 43 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 43315643 + NM_014753 BMS1 1 0.36 0.74 36 7.69 88.58 19 5.54 No 6 1.04 Yes 28 0.3 Yes -32 0.72 Yes 38 73.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 22657468 + NR_027293 BMS1P20 1 5.82 4.03 69 5.85 74.33 22 5.1 No 37 1.9 Yes 0 0 No -22 0.63 No 48 65.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 22657590 + NR_027293 BMS1P20 1 0.46 0.35 22 0.56 84.35 34 5.74 Yes 21 0.71 No 0 0 No -33 0.61 No 37 88.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 22658781 + NR_027293 BMS1P20 1 0.15 0.1 7 4.17 85.29 21 4.8 No 52 0.58 No 0 0 No -20 0.88 Yes 50 78.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 22658832 + NR_027293 BMS1P20 1 0.65 0.51 28 7.56 77.2 43 6.5 Yes 59 0.25 No 0 0 No -27 0.55 No 43 61.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 22661197 + NR_027293 BMS1P20 1 40.42 30.99 71 6.47 77.1 17 6.16 Yes 49 0.97 Yes 31 0.3 Yes -35 0.71 Yes 35 87.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 22663862 + NR_027293 BMS1P20 1 0.58 0.1 7 8.93 86.66 31 6.4 Yes 18 1.06 Yes 0 0 No -31 0.47 No 39 55.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 22663862 + NR_027293 BMS1P20 1 1.38 0.25 16 8.93 86.66 31 6.4 Yes 18 1.06 Yes 0 0 No -31 0.47 No 39 55.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 22664632 + NR_027293 BMS1P20 1 0.45 0.19 12 6.41 87.28 32 7.1 Yes 42 0.75 No 0 0 No -31 0.88 Yes 39 84.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 22667329 + NR_027293 BMS1P20 1 0.62 0.22 14 6.82 80.72 44 6.48 Yes 31 0.45 No 0 0 No -27 0.49 No 43 62.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 75484587 - NR_026592 BMS1P4 1 2.76 0.22 15 4.55 0 17 4.06 No 30 0.97 Yes 0 0 No -22 0.78 Yes 48 68.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 75484597 - NR_026592 BMS1P4 1 19.78 1.74 54 7.56 81.66 33 6.08 Yes 20 0.8 Yes 0 0 No -32 0.68 Yes 38 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 112555265 - NM_152556 BMT2 1 0.28 0.1 7 4.71 84.17 27 5.2 No 35 1.61 Yes 0 0 No -26 0.51 No 22 73.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 112555289 - NM_152556 BMT2 1 0.56 0.21 13 1.22 82.57 24 8.71 Yes 11 1.64 Yes 0 0 No -24 0.62 No 46 74.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 172589075 + NM_013979 BNIP1 1 0.67 0.35 18 5.14 75.22 24 4.25 No 31 1.06 Yes 0 0 No -23 0.89 Yes 47 93.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59957642 - NM_001320675 BNIP2 1 0.97 2.57 59 6.53 86.16 20 7.07 Yes 7 1.22 Yes 19 0.67 Yes -19 0.69 Yes 51 84.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 59957802 - NM_001320675 BNIP2 1 0.04 0.11 7 2.9 0 31 5.79 Yes 53 1.1 Yes 0 0 No -30 0.8 Yes 40 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59960338 - NM_001320675 BNIP2 1 4.36 12.06 72 7.52 79.9 17 5.72 Yes 4 1.23 Yes 25 0.86 Yes -25 0.92 Yes 45 90.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 59961508 - NM_001320675 BNIP2 1 0.05 0.18 11 7.84 85.53 30 7.7 Yes 17 1.1 Yes 0 0 No -29 0.81 Yes 41 87.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59969289 - NM_001320675 BNIP2 1 0.08 0.15 10 7.44 81.89 34 5.66 Yes 9 1.68 Yes 0 0 No -21 0.72 Yes 37 57.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 59969621 - NM_001320675 BNIP2 1 0.08 0.14 9 5.26 71.57 30 5.99 Yes 35 0.98 Yes 0 0 No -29 0.55 No 47 72.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 59971034 - NM_001320675 BNIP2 1 0.11 0.33 17 3.91 69.83 54 7.48 Yes 41 1.09 Yes 37 0.4 Yes -37 0.59 No 33 58.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 59972526 - NM_001320675 BNIP2 1 0.05 0.15 8 1.15 60.26 43 7.32 Yes 63 0.21 No 23 0.81 Yes -36 0.87 Yes 34 82.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 133783516 - NM_004052 BNIP3 1 0.23 0.38 20 5.24 80.12 20 6.08 Yes 7 1.16 Yes 0 0 No -19 0.81 Yes 51 88.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 173036674 - NM_138369 BOD1 1 13.48 6.63 72 5.21 85.01 33 5.91 Yes 57 1.4 Yes 32 0.87 Yes -28 0.73 Yes 42 84.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 173042033 - NM_138369 BOD1 1 0.35 0.15 10 7.8 82 22 6.32 Yes 47 1.01 Yes 0 0 No -25 0.82 Yes 45 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 13574467 - NM_148894 BOD1L1 1 48.45 33.47 72 8.04 80.11 12 5.44 No 62 1.04 Yes 23 0.44 Yes -23 0.67 Yes 47 69.42 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 13576376 - NM_148894 BOD1L1 1 0.44 0.32 19 11.32 91.26 17 5.09 No 4 0.97 Yes 0 0 No -27 0.85 Yes 43 80.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 13580581 - NM_148894 BOD1L1 1 0.19 0.21 11 4.2 74.32 28 6.89 Yes 15 1.48 Yes 0 0 No -27 0.76 Yes 43 92.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 13582166 - NM_148894 BOD1L1 1 0.08 0.1 7 4.14 77.55 67 8.66 Yes 40 0.7 No 0 0 No -29 0.72 Yes 41 74.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 13582676 - NM_148894 BOD1L1 1 9.93 8.07 71 0.95 83.77 20 4.51 No 11 0.94 Yes 20 0.87 Yes -23 0.81 Yes 47 88.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 13582678 - NM_148894 BOD1L1 1 0.15 0.13 7 -10.6 0 18 4.35 No 9 0.94 Yes 20 0.87 Yes -21 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 13611049 - NM_148894 BOD1L1 1 0.72 0.72 30 4.51 71.42 35 4.52 No 22 0.27 No 30 0.45 Yes -34 0.92 Yes 36 89.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 13627937 - NM_148894 BOD1L1 1 8.08 3.99 67 3.01 0 41 5.05 No 36 0.55 No 40 0.34 Yes -40 0.55 No 30 59.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 74371965 - NM_212552 BOLA3 1 0.13 0.24 16 7.09 78.31 29 6.78 Yes 16 1.42 Yes 0 0 No -28 0.68 Yes 42 84.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 73312575 + NM_001286746 BORA 1 0.23 0.24 14 7.29 80.96 22 7.67 Yes 9 1.33 Yes 0 0 No -21 0.8 Yes 49 85.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 73320881 + NM_001286746 BORA 1 0.24 0.14 9 5.65 88.2 22 5 No 58 0.54 No 0 0 No -21 0.61 No 49 41.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 73327059 + NM_001286746 BORA 1 0.11 0.11 7 5.18 82.77 34 7.68 Yes 75 0.56 No 0 0 No -30 0.38 No 31 60.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 73329292 + NM_001286746 BORA 1 0.22 0.22 14 -2.28 0 34 5.83 Yes 21 0.07 No 0 0 No -33 0.68 Yes 37 54.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 12515598 + NM_001300742 BORCS5 1 0.32 0.15 9 11.81 88.27 32 9.65 Yes 19 1.74 Yes 0 0 No -31 0.95 Yes 39 96.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 12520227 + NM_001300742 BORCS5 1 0.37 0.18 10 3.64 83.76 21 5 No 46 1.44 Yes 0 0 No -27 0.28 No 43 34.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 12525297 + NM_001300742 BORCS5 1 0.23 0.13 8 9.87 88.27 20 7.03 Yes 7 1.43 Yes 0 0 No -23 0.76 Yes 47 88.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 12548402 + NM_001300742 BORCS5 1 0.26 0.13 8 7.28 85.02 35 6.78 Yes 22 1.61 Yes 0 0 No -34 0.88 Yes 36 95.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 12557821 + NM_001300742 BORCS5 1 0.31 0.15 10 9.2 94.94 24 7.42 Yes 11 1.29 Yes 0 0 No -23 0.9 Yes 47 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 12584679 + NM_001300742 BORCS5 1 0.35 0.15 11 10.32 86.73 31 6.69 Yes 18 0.71 No 0 0 No -30 0.78 Yes 40 91.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 12590252 + NM_001300742 BORCS5 1 0.47 0.28 12 8.3 79.94 25 6.09 Yes 12 1.22 Yes 0 0 No -24 0.8 Yes 46 86.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 12614290 + NM_001300742 BORCS5 1 0.77 0.43 26 8.08 86.87 23 7.31 Yes 64 1.65 Yes 0 0 No -22 0.89 Yes 48 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104621910 + NM_144591 BORCS7 1 0.59 0.38 22 6.2 0 28 4.76 No 15 1.12 Yes 33 0.87 Yes -27 0.65 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 134331886 + NM_001724 BPGM 1 0.3 0.11 7 8.63 84.09 40 6.42 Yes 27 1.9 Yes 35 0.72 Yes -35 0.95 Yes 35 96.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 134343099 + NM_001724 BPGM 1 4.49 1.49 54 10.85 95.1 26 4.52 No 53 1.66 Yes 29 0.71 Yes -29 0.7 Yes 41 69.08 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 134350650 + NM_001724 BPGM 1 3.23 1.11 45 11.67 87.19 37 5.89 Yes 52 1.8 Yes 0 0 No -39 0.62 No 34 57.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 3119518 + NR_026649 BPHL 1 10.77 1.03 38 7.36 88.78 24 6.22 Yes 11 1.25 Yes 23 0.54 Yes -24 0.48 No 46 46.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 3150179 + NR_026649 BPHL 1 0.54 0.15 10 5.39 84.8 22 4.7 No 76 1.55 Yes 0 0 No -21 0.75 Yes 49 69.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 3150256 + NR_026649 BPHL 1 0.75 0.21 13 1.36 78.44 23 3.57 No 22 -3.19 No 0 0 No -26 0.5 No 44 26.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 3152771 + NR_026649 BPHL 1 2.68 0.74 29 9.73 91.13 22 5.92 Yes 67 1.55 Yes 22 0.51 Yes -22 0.36 No 44 63.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 220235213 - NM_001286149 BPNT1 1 0.09 0.18 11 9.1 94.6 54 5.86 Yes 41 0.94 Yes 0 0 No -30 0.57 No 43 70.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 220237758 - NM_001286149 BPNT1 1 0.55 1 44 13.69 89.78 48 5.85 Yes 35 0.56 No 0 0 No -26 0.41 No 30 65.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 220239460 - NM_001286149 BPNT1 1 2.14 4.04 70 8.89 89.22 32 5.72 Yes 33 0.86 Yes 31 0.71 Yes -24 0.51 No 46 37.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 220240468 - NM_001286149 BPNT1 1 0.23 0.42 23 7.95 82.24 14 9.18 Yes 1 1.09 Yes 24 0.73 Yes -32 0.51 No 42 49.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 220253197 - NM_001286149 BPNT1 1 1121.1 118.71 72 9.81 82.89 30 5.74 Yes 17 1.25 Yes 29 0.92 Yes -29 0.89 Yes 41 96.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 65823078 + NM_004459 BPTF 1 0.22 0.25 17 -8.07 81.08 35 7.21 Yes 22 0.02 No 0 0 No -34 0.9 Yes 36 91.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 65823913 + NM_004459 BPTF 1 0.12 0.15 8 3.05 88.59 26 5.16 No 3 0.62 No 0 0 No -25 0.84 Yes 45 79.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 65846513 + NM_004459 BPTF 1 0.49 0.56 28 2.57 0 54 9.47 Yes 25 1.34 Yes 0 0 No -37 0.91 Yes 33 96.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 65850059 + NM_004459 BPTF 1 0.15 0.19 11 0.75 0 36 5.11 No 13 0.67 No 0 0 No -28 0.56 No 42 55.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65866400 + NM_004459 BPTF 1 0.19 0.28 12 6.58 85.1 50 8.57 Yes 37 1.27 Yes 0 0 No -49 0.74 Yes 21 82.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 65871524 + NM_004459 BPTF 1 0.55 0.17 9 5.72 82.16 48 5.53 No 3 0.88 Yes 0 0 No -27 0.72 Yes 43 56.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 65882246 + NM_004459 BPTF 1 14.64 2.07 61 1.47 82.28 29 5.04 No 50 1.37 Yes 0 0 No -28 0.39 No 48 37.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65887962 + NM_004459 BPTF 1 3.12 1.65 56 2.46 76.57 42 6.46 Yes 40 0.2 No 0 0 No -35 0.58 No 29 77.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 65882246 + NM_004459 BPTF 1 5.26 0.85 40 1.47 82.28 29 5.04 No 50 1.37 Yes 0 0 No -28 0.39 No 48 37.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65887962 + NM_004459 BPTF 1 0.3 0.15 9 2.46 76.57 42 6.46 Yes 40 0.2 No 0 0 No -35 0.58 No 29 77.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 65887962 + NM_004459 BPTF 1 2.88 1.58 53 2.46 76.57 42 6.46 Yes 40 0.2 No 0 0 No -35 0.58 No 29 77.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 65891604 + NM_004459 BPTF 1 0.45 0.56 28 9.41 96.76 34 5.95 Yes 75 0.95 Yes 0 0 No -27 0.8 Yes 39 55.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 65905685 + NM_004459 BPTF 1 0.17 0.17 11 -2.75 0 34 5.13 No 7 0.8 Yes 31 0.48 Yes -19 0.77 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 65910539 + NM_004459 BPTF 1 0.27 0.24 15 6.63 93.7 22 5 No 71 1.14 Yes 0 0 No -21 0.64 No 49 59.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65925074 + NM_004459 BPTF 1 11.64 12.32 72 2.36 72.67 31 4.84 No 8 0.57 No 24 0.9 Yes -24 0.74 Yes 46 81.4 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 65925534 + NM_004459 BPTF 1 0.14 0.13 8 5.58 87.95 24 4.27 No 0 0.05 No 0 0 No -27 0.56 No 44 60.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65929887 + NM_004459 BPTF 1 0.16 0.13 9 5.24 72.91 58 7.79 Yes 17 0.5 No 0 0 No -23 0.54 No 47 55.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65942165 + NM_004459 BPTF 1 0.17 0.18 9 2.38 0 20 4.5 No 65 -3.1 No 0 0 No -20 0.47 No 50 50.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65944243 + NM_004459 BPTF 1 0.1 0.15 9 -4.08 0 26 5.04 No 31 0.57 No 0 0 No -25 0.52 No 48 23.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65947845 + NM_004459 BPTF 1 0.25 0.28 18 5.76 88.92 24 5.83 Yes 4 0.16 No 0 0 No -23 0.91 Yes 47 90.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 65957513 + NM_004459 BPTF 1 0.46 0.26 14 6.52 73.83 20 4.96 No 57 1.21 Yes 0 0 No -33 0.81 Yes 37 86.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 65959448 + NM_004459 BPTF 1 122.25 62.04 72 6.67 73.15 38 7.28 Yes 19 0.49 No 23 0.68 Yes -29 0.62 No 41 85.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 65960430 + NM_004459 BPTF 1 0.73 0.38 16 7.21 80.52 21 4.19 No 8 0.58 No 21 0.84 Yes -24 0.74 Yes 46 93.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 65977551 + NM_004459 BPTF 1 0.2 0.13 8 12.08 94.44 31 6.9 Yes 29 0.54 No 0 0 No -30 0.62 No 40 71.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 65977551 + NM_004459 BPTF 1 41.23 24.83 72 12.08 94.44 31 6.9 Yes 29 0.54 No 0 0 No -30 0.62 No 40 71.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 65978248 + NM_004459 BPTF 1 1.47 0.92 41 5.18 74.25 28 5.72 Yes 15 1.04 Yes 27 0.93 Yes -28 0.55 No 43 67.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 140447248 - NM_004333 BRAF 1 1.87 1.69 55 8.87 82.72 22 6.27 Yes 9 1.2 Yes 21 0.81 Yes -21 0.85 Yes 49 91.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 140494216 - NM_004333 BRAF 1 0.28 0.36 20 7.27 81.9 40 6.56 Yes 27 1.37 Yes 0 0 No -39 0.82 Yes 31 87.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 140500263 - NM_004333 BRAF 1 2.16 3.26 66 6.16 77.91 24 5.29 No 11 1.19 Yes 0 0 No -23 0.94 Yes 47 97.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 140502403 - NM_004333 BRAF 1 0.16 0.22 11 1.17 62.12 44 9.39 Yes 31 0.62 No 0 0 No -43 0.66 No 27 74.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 140508117 - NM_004333 BRAF 1 4.13 4.42 67 9.3 86.59 22 5.87 Yes 50 1.17 Yes 25 0.56 Yes -22 0.6 No 49 33.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 140518888 - NM_004333 BRAF 1 0.07 0.11 7 2.8 84.41 17 4.57 No 51 -2.75 No 0 0 No -21 0.76 Yes 49 70.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 140522253 - NM_004333 BRAF 1 0.41 0.56 32 6.08 79.78 30 5.57 Yes 17 0.45 No 0 0 No -29 0.68 Yes 41 71.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 140524447 - NM_004333 BRAF 1 0.35 0.42 20 11.13 93.81 26 6.84 Yes 40 -2.63 No 0 0 No -26 0.53 No 45 68.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 140534504 - NM_004333 BRAF 1 0.63 0.65 33 9.04 87.75 24 5.28 No 75 1.15 Yes 0 0 No -23 0.85 Yes 47 88.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 140543640 - NM_004333 BRAF 1 0.3 0.32 20 6.73 85.02 22 7.28 Yes 76 1.17 Yes 0 0 No -21 0.89 Yes 49 82.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112108069 - NM_006768 BRAP 1 1.84 1.83 62 4.91 88 17 6.52 Yes 4 0.91 Yes 0 0 No -16 0.26 No 54 39.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112117141 - NM_006768 BRAP 1 0.12 0.1 7 -1.53 0 21 6.05 Yes 37 1.68 Yes 0 0 No -31 0.57 No 39 46.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112118334 - NM_006768 BRAP 1 0.3 0.26 15 8.93 94.37 23 5.82 Yes 10 0.65 No 0 0 No -22 0.86 Yes 48 85.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2578579 - NM_152743 BRAT1 1 8.58 3.88 68 6.52 82.9 16 5.01 No 3 0.71 No 0 0 No -25 0.93 Yes 45 94.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2578981 - NM_152743 BRAT1 1 0.39 0.26 16 -0.12 0 36 6.29 Yes 27 0.05 No 0 0 No -35 0.75 Yes 35 68.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 2579542 - NM_152743 BRAT1 1 0.46 0.22 12 9.02 78.61 27 6.24 Yes 42 -1.15 No 21 0.69 Yes -32 0.8 Yes 38 66.38 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 2580529 - NM_152743 BRAT1 1 0.91 0.38 23 7.76 86.31 22 6.71 Yes 9 2.22 Yes 21 0.89 Yes -21 0.82 Yes 49 87.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2581257 - NM_152743 BRAT1 1 0.58 0.35 21 6.32 82.23 27 6.24 Yes 14 2.3 Yes 0 0 No -26 0.86 Yes 44 90.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2584688 - NM_152743 BRAT1 1 6.96 4.58 69 9.38 90.94 25 7.35 Yes 12 1.72 Yes 0 0 No -24 0.9 Yes 46 93.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2588759 - NM_152743 BRAT1 1 0.94 0.72 34 9.95 93 26 5.38 No 19 0.4 No 0 0 No -25 0.9 Yes 45 91.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41202208 - NM_007294 BRCA1 1 0.28 0.15 11 7.58 89.6 24 7 Yes 59 0.14 No 23 0.53 Yes -24 0.54 No 47 33.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 41202623 - NM_007294 BRCA1 1 0.32 0.18 13 4.53 88.13 33 7.14 Yes 20 1.48 Yes 0 0 No -29 0.56 No 39 63.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41203127 - NM_007294 BRCA1 1 0.12 0.1 7 1.96 0 11 4.12 No 52 1.35 Yes 0 0 No -44 0.55 No 26 83.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41210384 - NM_007294 BRCA1 1 0.1 0.11 7 7.62 94.37 34 6.66 Yes 21 -0.33 No 0 0 No -33 0.87 Yes 37 71.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41228629 - NM_007294 BRCA1 1 32.73 20.19 72 1.93 73.83 35 6.08 Yes 54 1.69 Yes 31 0.33 Yes -35 0.55 No 35 63.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 41231417 - NM_007294 BRCA1 1 4.82 3.03 66 8.58 87.46 28 6.99 Yes 58 0.99 Yes 27 0.66 Yes -27 0.57 No 43 67.55 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 41234590 - NM_007294 BRCA1 1 8.54 8.32 72 3.17 80.91 45 6.95 Yes 32 0.57 No 0 0 No -34 0.66 No 36 81.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41247961 - NM_007294 BRCA1 1 0.43 0.33 19 6.71 83.93 19 4.69 No 6 0.73 No 26 0.94 Yes -18 0.7 Yes 52 69.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 41251895 - NM_007294 BRCA1 1 37.51 28.76 72 4.78 82.9 28 7.42 Yes 15 1.24 Yes 24 0.88 Yes -27 0.87 Yes 43 85.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 41262598 - NM_007294 BRCA1 1 0.99 0.76 35 4.19 0 34 5.47 No 34 0.7 No 33 0.61 Yes -33 0.79 Yes 40 64.82 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 41271283 - NM_007294 BRCA1 1 0.23 0.22 14 4.86 83 33 7.21 Yes 20 1.52 Yes 0 0 No -32 0.63 No 38 80.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41273694 - NM_007294 BRCA1 1 4.29 3.94 67 3.2 0 38 7.04 Yes 25 1.27 Yes 0 0 No -37 0.84 Yes 33 85.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41273698 - NM_007294 BRCA1 1 0.58 0.57 29 2.3 84.41 34 6.76 Yes 21 1.28 Yes 0 0 No -33 0.86 Yes 37 83.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41276120 - NM_007294 BRCA1 1 1.53 0.35 18 0.23 73.54 17 4.68 No 63 0.02 No 0 0 No -24 0.6 No 29 47.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32899216 + NM_000059 BRCA2 1 0.84 0.51 23 -2.72 0 24 5.8 Yes 64 -3.45 No 0 0 No -27 0.91 Yes 43 94.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32910039 + NM_000059 BRCA2 1 0.19 0.1 7 9.37 87.72 24 6.4 Yes 11 0.68 No 0 0 No -27 0.54 No 43 62.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32918697 + NM_000059 BRCA2 1 0.63 0.14 9 -9.97 81.65 32 6.66 Yes 34 0.94 Yes 0 0 No -26 0.51 No 44 60.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32938053 + NM_000059 BRCA2 1 0.19 0.11 8 8.84 83.04 28 5.66 Yes 15 0.36 No 0 0 No -27 0.79 Yes 43 89.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32949479 + NM_000059 BRCA2 1 0.91 0.47 21 3.34 72.06 37 6.16 Yes 24 1.6 Yes 36 0.65 Yes -36 0.68 Yes 34 90.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 32953937 + NM_000059 BRCA2 1 0.54 0.25 15 7.86 88.86 27 4.23 No 55 1.08 Yes 25 0.74 Yes -26 0.85 Yes 44 59.37 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 32957175 + NM_000059 BRCA2 1 0.63 0.36 18 7.43 76.7 27 6.71 Yes 14 0.67 No 0 0 No -26 0.87 Yes 44 81.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32958029 + NM_000059 BRCA2 1 1.55 0.96 42 6.18 83.02 26 5.48 No 67 -5.19 No 0 0 No -25 0.59 No 45 43.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32970127 + NM_000059 BRCA2 1 2.86 1.21 46 11.15 88.27 62 9.1 Yes 49 1.58 Yes 32 0.04 Yes -52 0.53 No 18 70.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 32972360 + NM_000059 BRCA2 1 0.6 0.18 10 2.1 69.15 35 4.51 No 37 0.04 No 0 0 No -31 0.65 No 36 59.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 154301648 + NM_001018055 BRCC3 1 13.42 11.57 72 5.64 83.66 76 7.97 Yes 63 1.17 Yes 26 0.51 Yes -28 0.55 No 38 55.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 154321006 + NM_001018055 BRCC3 1 0.15 0.21 13 9.45 82.12 19 7.73 Yes 6 1.35 Yes 0 0 No -24 0.92 Yes 46 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 154323085 + NM_001018055 BRCC3 1 0.13 0.15 10 4.56 72.64 17 5.19 No 4 0.61 No 0 0 No -23 0.72 Yes 47 68.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 154327486 + NM_001018055 BRCC3 1 0.16 0.19 13 0.79 73.17 39 6.31 Yes 71 -3.97 No 0 0 No -31 0.43 No 39 34.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 154327589 + NM_001018055 BRCC3 1 27.85 36.01 72 8.68 80.56 31 7.53 Yes 72 -2.79 No 30 0.81 Yes -30 0.95 Yes 40 96.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50168061 - NM_001304809 BRD1 1 1.09 0.67 34 -1.27 0 34 6.85 Yes 21 0.92 Yes 0 0 No -33 0.78 Yes 37 61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 50171752 - NM_001304809 BRD1 1 1.95 1.11 45 10.93 88.46 27 6.24 Yes 14 1.49 Yes 0 0 No -26 0.96 Yes 44 96.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50177628 - NM_001304809 BRD1 1 5.56 3.04 61 10.06 92.14 25 6.07 Yes 39 1.27 Yes 0 0 No -24 0.76 Yes 46 82.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50181171 - NM_001304809 BRD1 1 0.41 0.1 7 3.96 81.25 24 4.89 No 11 0.92 Yes 23 0.89 Yes -23 0.79 Yes 47 47.28 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 50181536 - NM_001304809 BRD1 1 73.7 16.94 72 7.75 91.86 23 5.72 Yes 30 0.63 No 29 0.52 Yes -29 0.61 No 48 50.75 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50191645 - NM_001304809 BRD1 1 0.96 0.63 32 5.32 78.12 25 5.03 No 58 -3.28 No 0 0 No -24 0.82 Yes 46 69.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50191800 - NM_001304809 BRD1 1 0.42 0.26 17 7.53 74.48 15 5.44 No 2 1.17 Yes 28 0.67 Yes -25 0.39 No 43 46.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 50192329 - NM_001304809 BRD1 1 3.08 1.17 42 -2.37 0 9 3.87 No 43 -2.82 No 0 0 No -28 0.49 No 42 48.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50214635 - NM_001304809 BRD1 1 2.45 1.6 46 2.57 78.46 59 7.01 Yes 13 0.92 Yes 25 0.92 Yes -25 0.83 Yes 45 92.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 136899949 - NM_007371 BRD3 1 23.81 7 72 1.08 75.37 27 5.74 Yes 14 1.1 Yes 0 0 No -26 0.88 Yes 44 74.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136899949 - NM_007371 BRD3 1 0.32 0.1 7 1.08 75.37 27 5.74 Yes 14 1.1 Yes 0 0 No -26 0.88 Yes 44 74.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136901714 - NM_007371 BRD3 1 2.74 0.31 15 -0.07 77.96 83 11.42 Yes 70 1.99 Yes 26 0.04 Yes -38 0.19 No 27 11.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 136901714 - NM_007371 BRD3 1 1.37 0.18 11 -0.07 77.96 83 11.42 Yes 70 1.99 Yes 26 0.04 Yes -38 0.19 No 27 11.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 136914880 - NM_007371 BRD3 1 3.29 0.85 39 5.43 86.98 35 7 Yes 59 0.73 No 0 0 No -34 0.95 Yes 36 96.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 136915672 - NM_007371 BRD3 1 0.62 0.14 9 10.76 84.64 30 6 Yes 50 0.8 Yes 0 0 No -35 0.55 No 40 57.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 15349789 - NM_058243 BRD4 1 0.23 0.31 16 -12.51 69.32 23 5.92 Yes 10 1.49 Yes 0 0 No -22 0.89 Yes 48 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 15350787 - NM_058243 BRD4 1 0.33 0.11 7 8.73 84.84 16 4.64 No 60 1.48 Yes 0 0 No -18 0.63 No 52 89.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 15360102 - NM_058243 BRD4 1 54.86 60.04 72 11.43 79.15 29 9.5 Yes 16 1.62 Yes 28 0.92 Yes -28 0.95 Yes 42 97.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 15364595 - NM_058243 BRD4 1 0.71 0.78 35 -0.22 67.45 23 6.54 Yes -1 0.32 No 22 0.91 Yes -22 0.81 Yes 48 69.64 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 15366400 - NM_058243 BRD4 1 0.16 0.31 17 -4.05 0 31 7.19 Yes 50 0.44 No 0 0 No -30 0.91 Yes 40 84.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 15366444 - NM_058243 BRD4 1 0.23 0.46 28 6.86 87.02 19 5 No 6 0.43 No 26 0.92 Yes -18 0.68 Yes 45 57.6 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 15370674 - NM_058243 BRD4 1 0.08 0.13 8 11.56 86.63 23 6.24 Yes 10 2.35 Yes 0 0 No -22 0.89 Yes 48 94.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 15379052 - NM_058243 BRD4 1 1.31 3.17 67 4.15 70.91 21 4.57 No 8 0.22 No 24 0.77 Yes -24 0.75 Yes 46 88.86 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 15379093 - NM_058243 BRD4 1 3.95 9.58 72 3.5 89.6 23 4.88 No 47 1.32 Yes 25 0.67 Yes -22 0.62 No 49 40.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 15382204 - NM_058243 BRD4 1 1.5 4.54 71 8.32 81.9 21 6.38 Yes 8 0.97 Yes 0 0 No -20 0.61 No 50 65.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 15383412 - NM_058243 BRD4 1 0.09 0.26 16 3.9 70.21 29 4.74 No 1 1.49 Yes 0 0 No -19 0.44 No 42 74.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 50353343 - NM_001173984 BRD7 1 0.27 0.53 32 4.69 89.08 22 4.69 No 56 0.67 No 0 0 No -21 0.88 Yes 49 90.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50353369 - NM_001173984 BRD7 1 0.13 0.24 15 5.67 79.68 26 5.57 Yes 30 0.7 No 0 0 No -25 0.55 No 45 65.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 50353484 - NM_001173984 BRD7 1 0.13 0.29 12 5.28 86.26 84 8.91 Yes 71 0.44 No 0 0 No -35 0.86 Yes 35 89.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50354300 - NM_001173984 BRD7 1 0.24 0.6 29 -3.71 61.38 37 5.94 Yes 67 -3.31 No 26 0.3 Yes -36 0.32 No 36 63.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 50354686 - NM_001173984 BRD7 1 220.21 171.56 72 6.07 83.02 27 6.08 Yes 14 1.23 Yes 23 0.83 Yes -26 0.76 Yes 44 73.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50354686 - NM_001173984 BRD7 1 0.15 0.13 7 6.07 83.02 27 6.08 Yes 14 1.23 Yes 23 0.83 Yes -26 0.76 Yes 44 73.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50357729 - NM_001173984 BRD7 1 0.06 0.14 8 3.77 78.07 27 5.19 No 30 0.71 No 0 0 No -26 0.64 No 44 50.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 50358800 - NM_001173984 BRD7 1 0.04 0.1 7 5.66 80.42 20 4.78 No -3 0.49 No 0 0 No -24 0.81 Yes 46 81.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50359767 - NM_001173984 BRD7 1 0.57 1.47 57 4.01 76.94 34 5.42 No 29 0.15 No 0 0 No -33 0.71 Yes 37 69.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50360301 - NM_001173984 BRD7 1 0.11 0.22 13 -4.7 75.18 27 6.63 Yes 14 0.83 Yes 0 0 No -26 0.96 Yes 44 97.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 50360336 - NM_001173984 BRD7 1 0.07 0.14 10 4.29 75.4 13 5.83 Yes 63 -4 No 24 0.91 Yes -60 0.36 No 58 21.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 50367628 - NM_001173984 BRD7 1 0.06 0.11 7 6.81 84.02 24 5.74 Yes 15 0.96 Yes 25 0.87 Yes -23 0.72 Yes 47 81.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50368802 - NM_001173984 BRD7 1 0.08 0.17 10 -7.83 0 32 5.5 No 41 -3.32 No 0 0 No -29 0.38 No 41 38.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 50371787 - NM_001173984 BRD7 1 0.31 0.63 33 11.47 93.04 68 6.18 Yes 44 1.68 Yes 0 0 No -56 0.87 Yes 14 89.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 50374296 - NM_001173984 BRD7 1 0.47 0.76 35 5.95 92.75 20 6.07 Yes 74 0.9 Yes 0 0 No -19 0.52 No 42 55.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 50383474 - NM_001173984 BRD7 1 0.35 0.54 27 1.15 0 17 3.46 No 73 0.91 Yes 0 0 No -16 0.83 Yes 54 68.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 50383482 - NM_001173984 BRD7 1 0.47 0.74 34 3.58 77.56 13 4.99 No 65 0.91 Yes 0 0 No -30 0.44 No 62 31.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 50383535 - NM_001173984 BRD7 1 1.02 1.56 57 3.63 73.29 25 6.97 Yes 12 0.95 Yes 24 0.87 Yes -24 0.74 Yes 46 47.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 50383989 - NM_001173984 BRD7 1 0.06 0.15 9 0.91 63.14 57 7.03 Yes 44 1.24 Yes 0 0 No -23 0.32 No 47 55.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 50384078 - NM_001173984 BRD7 1 0.08 0.21 10 -14.66 0 43 4.88 No 63 1.82 Yes 0 0 No -25 0.85 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 50395844 - NM_001173984 BRD7 1 0.13 0.24 14 7.83 77.06 34 5.22 No 21 0.41 No 0 0 No -33 0.69 Yes 37 68.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 50402201 - NM_001173984 BRD7 1 0.18 0.18 11 -7.87 0 12 3.85 No 36 0.94 Yes 0 0 No -48 0.85 Yes 22 94.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137495898 - NM_139199 BRD8 1 0.23 0.18 11 6.23 76.83 32 4.67 No 8 0.12 No 22 0.82 Yes -32 0.71 Yes 38 78.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137497824 - NM_139199 BRD8 1 0.14 0.11 8 4.1 0 15 4.58 No 37 0.88 Yes 0 0 No -39 0.52 No 45 66.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 137499333 - NM_139199 BRD8 1 0.53 0.44 24 5.38 82.75 30 6.46 Yes 1 0.97 Yes 23 0.43 Yes -29 0.46 No 41 40.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 137502300 - NM_139199 BRD8 1 8.71 3.43 65 7.46 73.24 22 5.25 No 58 0.89 Yes 21 0.58 Yes -21 0.62 No 49 76.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 137502335 - NM_139199 BRD8 1 0.41 0.18 10 2.8 75.13 36 6.85 Yes 23 0.91 Yes 21 0.58 Yes -35 0.63 No 35 76.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 137504378 - NM_139199 BRD8 1 718.33 57.07 72 9.36 85.16 23 5.22 No 68 -4.31 No 27 0.72 Yes -22 0.45 No 43 52.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 137504985 - NM_139199 BRD8 1 0.21 0.13 7 7.91 79.15 20 5.63 Yes 7 0.94 Yes 0 0 No -25 0.76 Yes 45 64.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 871675 - NR_134296 BRD9 1 0.12 0.11 7 -4.69 0 19 6.16 Yes 6 0.69 No 0 0 No -31 0.6 No 39 56.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 871704 - NR_134296 BRD9 1 0.12 0.13 7 -1.92 53.25 48 6.99 Yes 35 0.55 No 26 0.36 Yes -47 0.65 No 28 53.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 875409 - NR_134296 BRD9 1 0.13 0.14 9 7.77 84.84 50 5.53 No 6 1.16 Yes 0 0 No -44 0.4 No 32 65.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 876321 - NR_134296 BRD9 1 0.26 0.17 9 1.02 0 10 4 No 23 0.33 No 28 0.81 Yes -35 0.92 Yes 35 91.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 883566 - NR_134296 BRD9 1 6.38 3.22 65 9.35 91.17 23 5.83 Yes 10 1.71 Yes 22 0.97 Yes -22 0.78 Yes 48 88.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 886252 - NR_134296 BRD9 1 0.4 0.38 21 8.7 77.49 27 6.93 Yes 14 1.3 Yes 0 0 No -26 0.69 Yes 44 82.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 886820 - NR_134296 BRD9 1 16.84 11.13 72 6.7 95.98 28 5.48 No 40 -1.48 No 0 0 No -27 0.95 Yes 43 93.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 886883 - NR_134296 BRD9 1 11.69 8.06 71 10.69 87.88 33 6.63 Yes 73 1.61 Yes 32 0.58 Yes -31 0.49 No 39 59.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 887583 - NR_134296 BRD9 1 1 0.9 42 5.08 0 31 5.81 Yes 18 0.79 Yes 0 0 No -30 0.82 Yes 40 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 889276 - NR_134296 BRD9 1 1.99 1.44 52 -0.65 0 24 5.23 No 35 -1.49 No 19 0.74 Yes -24 0.63 No 46 82.07 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 889763 - NR_134296 BRD9 1 1044.1 74.9 72 3.5 75.9 26 6.41 Yes 40 0.76 No 25 0.7 Yes -25 0.8 Yes 45 82.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 891399 - NR_134296 BRD9 1 0.22 0.13 8 -5.24 0 28 7.81 Yes 15 1.58 Yes 0 0 No -27 0.95 Yes 43 73.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 28137448 + NM_001329112 BRE 1 0.06 0.1 7 11.78 96.25 25 5.48 No 12 0.34 No 0 0 No -24 0.88 Yes 46 84.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 28141120 + NM_001329112 BRE 1 0.08 0.11 7 10.16 82.36 33 5.74 Yes 20 0.81 Yes 0 0 No -26 0.75 Yes 44 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 28153043 + NM_001329112 BRE 1 0.19 0.19 13 11.23 92.14 27 6.84 Yes 14 1.35 Yes 0 0 No -26 0.89 Yes 44 78.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 28165252 + NM_001329112 BRE 1 3.67 4.01 70 2.44 0 82 5.16 No 69 0.5 No 0 0 No -29 0.52 No 33 52.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 28271398 + NM_001329112 BRE 1 0.14 0.14 9 7.59 95.76 22 4.99 No 38 0.94 Yes 0 0 No -21 0.9 Yes 49 94.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 28274330 + NM_001329112 BRE 1 0.61 0.6 28 5.3 79.84 30 5.83 Yes 17 0.89 Yes 0 0 No -29 0.92 Yes 41 94.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 28523731 + NM_001329112 BRE 1 0.32 0.24 16 7.3 80.17 30 5.93 Yes 17 0.35 No 0 0 No -29 0.63 No 41 72.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 28550140 + NM_001329112 BRE 1 11.85 8.61 72 5.31 81.01 49 7.13 Yes 63 -0.64 No 44 0.16 Yes -48 0.46 No 26 78.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 28561344 + NM_001329112 BRE 1 1.16 0.82 37 6.23 85.11 24 6.02 Yes 51 2.22 Yes 0 0 No -23 0.95 Yes 47 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105683616 - NM_001242786 BRF1 1 0.36 0.17 10 6.09 84.95 21 5.2 No 76 0.9 Yes 25 0.86 Yes -25 0.91 Yes 45 83.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105686465 - NM_001242786 BRF1 1 17.1 3.29 63 2.04 73.53 29 6.19 Yes 16 0.88 Yes 25 0.93 Yes -28 0.92 Yes 42 88.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105688452 - NM_001242786 BRF1 1 0.37 0.13 8 11.09 80.28 59 7.74 Yes 1 1.33 Yes 0 0 No -29 0.72 Yes 41 58.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 105693751 - NM_001242786 BRF1 1 0.53 0.21 13 7.23 92.41 20 4.68 No 3 0.28 No 0 0 No -29 0.8 Yes 41 76.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 37703293 - NM_018310 BRF2 1 1.03 0.35 19 3.84 85.88 24 4.96 No 31 1.09 Yes 24 0.78 Yes -23 0.63 No 47 50.83 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 37703313 - NM_018310 BRF2 1 0.37 0.17 9 2.17 0 14 4.47 No 11 1.08 Yes 24 0.78 Yes -23 0.78 Yes 47 88.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 97912131 + NM_015379 BRI3 1 0.16 0.26 17 4.47 72.12 33 6.24 Yes 71 0.45 No 24 0.63 Yes -32 0.7 Yes 38 77.57 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 125495001 + NM_080626 BRI3BP 1 0.18 0.17 10 10.63 83.9 35 6.06 Yes 22 1.49 Yes 0 0 No -30 0.78 Yes 40 85.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 125499791 + NM_080626 BRI3BP 1 0.3 0.61 33 3.25 74.4 22 4.42 No 51 0.54 No 0 0 No -21 0.71 Yes 49 71.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 125502212 + NM_080626 BRI3BP 1 0.06 0.11 7 8.69 78.33 22 5.2 No 68 -3.71 No 0 0 No -22 0.5 No 48 76.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 125509663 + NM_080626 BRI3BP 1 1.26 2.6 63 9.23 82.13 21 9.49 Yes 8 1.97 Yes 0 0 No -20 0.88 Yes 50 90.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59778297 - NM_032043 BRIP1 1 0.6 0.24 11 3.78 86.05 21 4.9 No 8 0.17 No 0 0 No -25 0.4 No 50 47.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59806613 - NM_032043 BRIP1 1 0.26 0.17 9 6.9 96.24 27 5.2 No 72 1.24 Yes 0 0 No -26 0.81 Yes 44 67.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59816772 - NM_032043 BRIP1 1 1.92 1 43 8.35 84.74 31 6.4 Yes 39 1.57 Yes 30 0.73 Yes -30 0.74 Yes 40 77.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 59832145 - NM_032043 BRIP1 1 0.31 0.1 7 8 77.35 33 7 Yes 62 0.47 No 0 0 No -32 0.94 Yes 38 95.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59840127 - NM_032043 BRIP1 1 0.92 0.35 18 7.63 80.84 21 6.79 Yes 41 1.28 Yes 0 0 No -20 0.58 No 50 74.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59853864 - NM_032043 BRIP1 1 5.23 1 42 8.71 83.3 30 5.41 No 65 0.91 Yes 24 0.22 Yes -29 0.59 No 40 51.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 59855541 - NM_032043 BRIP1 1 5.4 1.15 46 5.69 83.54 21 5.1 No 37 1.14 Yes 0 0 No -20 0.79 Yes 50 80.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59856140 - NM_032043 BRIP1 1 8.7 1.86 62 3.47 77.42 29 4.63 No 73 -2.19 No 0 0 No -28 0.53 No 42 71.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59857450 - NM_032043 BRIP1 1 2.42 0.24 14 4.6 76.11 16 5.1 No 46 0.07 No 0 0 No -24 0.74 Yes 46 87.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59857922 - NM_032043 BRIP1 1 0.58 0.22 12 6.53 86.16 20 7.12 Yes 7 1.22 Yes 0 0 No -19 0.78 Yes 51 89.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59870601 - NM_032043 BRIP1 1 0.49 0.22 12 6.89 76.42 13 6.14 Yes 56 -2.67 No 0 0 No -21 0.52 No 49 60.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59873902 - NM_032043 BRIP1 1 0.63 0.25 15 6.72 88.68 19 5.37 No 6 0.78 Yes 0 0 No -22 0.8 Yes 48 77.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59879352 - NM_032043 BRIP1 1 0.84 0.43 24 13.53 89.43 31 4.71 No 9 1.17 Yes 0 0 No -21 0.43 No 49 65.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59885913 - NM_032043 BRIP1 1 0.2 0.13 7 4.03 88.31 15 5.83 Yes 2 1.21 Yes 0 0 No -27 0.93 Yes 43 94.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59886937 - NM_032043 BRIP1 1 0.46 0.25 16 7.08 84.69 29 5.09 No 3 0.99 Yes 0 0 No -28 0.48 No 42 65.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59923181 - NM_032043 BRIP1 1 0.78 0.44 24 3.68 84.87 28 4.28 No 5 1.15 Yes 0 0 No -21 0.47 No 49 52.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59934611 - NM_032043 BRIP1 1 1.13 0.53 28 1.99 68.7 21 4.87 No 19 1.05 Yes 24 0.64 Yes -21 0.61 No 49 53.67 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 59938927 - NM_032043 BRIP1 1 32.3 8.21 71 2.23 0 26 7.06 Yes 13 0.83 Yes 19 0.58 Yes -25 0.64 No 45 62.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 59939437 - NM_032043 BRIP1 1 0.85 0.19 13 4.45 80.16 16 6.24 Yes 3 0.53 No 25 0.48 Yes -25 0.34 No 40 57.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 59940103 - NM_032043 BRIP1 1 0.77 0.21 11 10.61 90.72 20 6.78 Yes 7 1.34 Yes 0 0 No -19 0.56 No 45 68.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 34922624 + NM_018321 BRIX1 1 0.16 0.54 28 -6.25 0 15 4.24 No 43 -4.52 No 25 0.86 Yes -14 0.72 Yes 56 45.34 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 34922787 + NM_018321 BRIX1 1 0.02 0.11 8 -2.79 0 23 5.73 Yes 37 0.78 Yes 34 0.67 Yes -20 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 10160589 + NM_018462 BRK1 1 2.42 16.86 72 8.41 83.82 28 6.24 Yes 29 -0.08 No 0 0 No -27 0.75 Yes 43 75.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 10167311 + NM_018462 BRK1 1 0.1 0.74 33 -9.94 0 25 5 No 12 1.07 Yes 0 0 No -24 0.71 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 66105338 - NM_001024957 BRMS1 1 2.95 0.13 9 6.87 82.49 17 5.66 Yes 4 1.66 Yes 0 0 No -27 0.5 No 18 57.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 66105361 - NM_001024957 BRMS1 1 4015.57 209 72 5.32 75.99 30 5.83 Yes 24 1.42 Yes 29 0.93 Yes -29 0.64 No 41 88.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 66105361 - NM_001024957 BRMS1 1 30.84 1.76 58 5.32 75.99 30 5.83 Yes 24 1.42 Yes 29 0.93 Yes -29 0.64 No 41 88.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 66105361 - NM_001024957 BRMS1 1 2.39 0.17 11 5.32 75.99 30 5.83 Yes 24 1.42 Yes 29 0.93 Yes -29 0.64 No 41 88.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 66105386 - NM_001024957 BRMS1 1 2.72 0.17 11 2.05 69.22 12 4.55 No -1 0.96 Yes 29 0.93 Yes -41 0.46 No 29 58 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 66105780 - NM_001024957 BRMS1 1 0.07 0.13 7 -0.91 0 21 4.56 No 58 -3.71 No 28 0.92 Yes -20 0.67 Yes 56 40.46 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 66109093 - NM_001024957 BRMS1 1 0.29 0.51 24 -1.14 75.79 21 5.83 Yes 8 1.19 Yes 0 0 No -20 0.92 Yes 50 80.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66109706 - NM_001024957 BRMS1 1 0.2 0.33 19 -3.78 0 10 4 No 66 0.71 No 0 0 No -29 0.72 Yes 41 85.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 36299000 + NM_032352 BRMS1L 1 0.43 0.21 14 6.24 77.96 30 5.95 Yes 2 1.09 Yes 25 0.68 Yes -29 0.42 No 41 50.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 36300169 + NM_032352 BRMS1L 1 1.28 0.67 30 11.22 88.27 36 5.92 Yes 40 1.08 Yes 0 0 No -28 0.81 Yes 42 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 36327782 + NM_032352 BRMS1L 1 0.7 0.75 31 6.21 91.48 31 6.4 Yes 7 0.69 No 31 0.65 Yes -30 0.51 No 40 36.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 36330903 + NM_032352 BRMS1L 1 0.48 0.43 21 5.92 86.36 16 5.14 No 48 0.78 Yes 0 0 No -22 0.64 No 48 61.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 36337090 + NM_032352 BRMS1L 1 3.17 2.5 58 4.65 74.15 24 5.29 No 27 2.32 Yes 25 0.8 Yes -23 0.73 Yes 47 87.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 222886929 + NM_001288581 BROX 1 3.67 0.14 10 9.9 79.71 53 7.62 Yes 40 0.82 Yes 28 0.06 Yes -52 0.69 Yes 18 69.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 222888486 + NM_001288581 BROX 1 5.7 0.21 13 10.57 92 30 6.95 Yes 17 0.76 No 29 0.88 Yes -29 0.96 Yes 41 87.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 222891199 + NM_001288581 BROX 1 0.66 0.35 19 6.83 79.99 26 5.84 Yes 72 -2.06 No 25 0.73 Yes -33 0.68 Yes 45 70.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 222897441 + NM_001288581 BROX 1 0.23 0.15 10 -1.49 0 11 3.04 No 11 1.53 Yes 24 0.88 Yes -32 0.67 Yes 38 79.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 222902100 + NM_001288581 BROX 1 2.26 1.92 61 1.99 80.7 24 4.97 No 11 0.45 No 0 0 No -23 0.77 Yes 47 82.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 9783691 + NM_001003694 BRPF1 1 0.72 0.22 11 -0.39 75.21 17 4.8 No 30 0.67 No 22 0.98 Yes -42 0.84 Yes 28 52.55 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 9785264 + NM_001003694 BRPF1 1 101.83 13.83 72 3.49 79.88 31 6.49 Yes 18 2.38 Yes 27 0.95 Yes -30 0.82 Yes 40 87.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 9788853 + NM_001003694 BRPF1 1 0.36 0.13 9 0.41 0 39 5.24 No 6 0.95 Yes 0 0 No -29 0.55 No 41 77.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 36172134 + NM_015695 BRPF3 1 0.49 0.21 13 3.75 83.78 22 4.69 No 73 1.6 Yes 0 0 No -21 0.91 Yes 49 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36177977 + NM_015695 BRPF3 1 5.45 2.07 56 6.17 86.55 23 5.74 Yes 34 0.22 No 22 0.78 Yes -23 0.5 No 45 67.17 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 36177999 + NM_015695 BRPF3 1 1.77 0.64 27 1.77 0 10 4 No 56 0.23 No 0 0 No -26 0.52 No 39 66.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36178161 + NM_015695 BRPF3 1 0.71 0.25 15 2.38 78.15 25 4.86 No 12 0.32 No 0 0 No -24 0.63 No 46 74.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 36178878 + NM_015695 BRPF3 1 0.31 0.14 9 5.94 78.3 31 6.71 Yes 18 2.15 Yes 0 0 No -30 0.91 Yes 40 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36179079 + NM_015695 BRPF3 1 0.73 0.26 16 8.52 85.95 32 5.57 Yes 64 0.83 Yes 0 0 No -31 0.82 Yes 39 94.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36181636 + NM_015695 BRPF3 1 2.82 0.71 39 4.69 69.32 15 5.74 Yes 69 0.44 No 29 0.42 Yes -29 0.6 No 41 69.61 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 36193047 + NM_015695 BRPF3 1 1.83 0.79 36 1.44 0 47 7.02 Yes 73 -3.1 No 21 0.06 Yes -47 0.62 No 23 79.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 36197635 + NM_015695 BRPF3 1 0.73 0.24 15 8 82.7 25 5.76 Yes 44 1.44 Yes 0 0 No -24 0.52 No 42 51.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 40591339 - NM_033656 BRWD1 1 0.32 0.13 7 3.01 0 32 6.16 Yes 19 0.84 Yes 0 0 No -31 0.68 Yes 39 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 40601146 - NM_033656 BRWD1 1 1.59 0.53 29 8.6 87.83 30 5.33 No 25 0.63 No 0 0 No -23 0.45 No 47 51.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 40602235 - NM_033656 BRWD1 1 3.25 0.89 41 5.98 76.95 18 4.91 No 35 1.02 Yes 0 0 No -29 0.59 No 41 45.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 40608696 - NM_033656 BRWD1 1 0.83 0.29 17 4.34 75.62 14 4.9 No 1 1.41 Yes 0 0 No -35 0.56 No 53 51.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 40636542 - NM_033656 BRWD1 1 0.46 0.18 12 5.54 72.78 16 4.68 No 30 1.11 Yes 0 0 No -28 0.78 Yes 42 92.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 40641893 - NM_033656 BRWD1 1 0.32 0.15 11 6.99 91.87 25 5.09 No 45 1.2 Yes 0 0 No -24 0.93 Yes 46 93.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 40650234 - NM_033656 BRWD1 1 0.5 0.13 8 10.17 87.75 23 6.6 Yes 10 2.1 Yes 0 0 No -22 0.84 Yes 48 83.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 40653794 - NM_033656 BRWD1 1 0.3 0.13 7 7.32 90.82 143 12.4 Yes NA NA NA 0 0 No -26 0.67 Yes 44 45.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 40660754 - NM_033656 BRWD1 1 2.27 0.86 36 8.1 84.66 31 4.63 No 32 0.79 Yes 0 0 No -30 0.65 No 40 69.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 40676537 - NM_033656 BRWD1 1 2.29 0.71 35 10.3 95.1 38 6.7 Yes 25 1.02 Yes 0 0 No -26 0.88 Yes 44 88.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 40683956 - NM_033656 BRWD1 1 0.87 0.28 15 10.79 81.61 31 6.08 Yes 73 -2.08 No 0 0 No -30 0.74 Yes 40 80.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 79936993 - NM_153252 BRWD3 1 2.34 1.03 39 1.15 0 16 3.87 No 13 0.2 No 0 0 No -37 0.53 No 33 58.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 79956232 - NM_153252 BRWD3 1 0.52 0.22 13 7.31 97.52 33 6.6 Yes 63 0.76 No 0 0 No -28 0.68 Yes 42 75.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 79960314 - NM_153252 BRWD3 1 0.49 0.21 14 2.18 77.27 27 5.01 No 71 0.52 No 0 0 No -26 0.97 Yes 44 97.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 79971743 - NM_153252 BRWD3 1 0.5 0.22 15 -1.58 0 13 3.99 No 14 1.46 Yes 0 0 No -58 0.48 No 38 37.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 79986711 - NM_153252 BRWD3 1 4.22 1.74 55 11.03 95.65 24 5.04 No 11 1.02 Yes 0 0 No -23 0.51 No 47 79.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 79999227 - NM_153252 BRWD3 1 0.29 0.15 9 8.06 86.04 23 4.26 No 61 0.13 No 0 0 No -23 0.78 Yes 47 79.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 80001680 - NM_153252 BRWD3 1 0.56 0.21 11 8.51 83.8 44 6.56 Yes 56 0.85 Yes 0 0 No -25 0.66 No 45 70.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 80041521 - NM_153252 BRWD3 1 0.49 0.19 11 3.18 0 28 5.35 No 15 0.51 No 0 0 No -41 0.38 No 29 37.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 80046931 - NM_153252 BRWD3 1 1.29 0.5 29 7.53 89.64 18 5.29 No 5 0.83 Yes 0 0 No -29 0.7 Yes 41 47.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 80061266 - NM_153252 BRWD3 1 0.56 0.19 12 4.23 80.64 21 5.66 Yes 8 1.06 Yes 0 0 No -20 0.83 Yes 50 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 80061269 - NM_153252 BRWD3 1 0.68 0.25 15 6.74 83.82 18 5.39 No 5 1.09 Yes 0 0 No -17 0.61 No 53 81.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 62458021 - NM_032667 BSCL2 1 0.27 0.31 16 2.7 71.97 15 5.97 Yes 2 1.07 Yes 0 0 No -19 0.84 Yes 51 86.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62458346 - NM_032667 BSCL2 1 3.6 3.54 66 5.01 80.35 30 4.83 No 11 2.56 Yes 23 0.94 Yes -29 0.48 No 41 74.91 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 32834940 - NM_001300958 BSDC1 1 0.83 0.65 31 7.57 80.84 21 7.2 Yes 8 1.06 Yes 20 0.72 Yes -20 0.86 Yes 50 94.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32849508 - NM_001300958 BSDC1 1 4.27 0.21 14 4.75 81.32 29 5.46 No 11 0.6 No 23 0.91 Yes -23 0.91 Yes 47 82.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32849541 - NM_001300958 BSDC1 1 34.5 1.71 60 5.59 79 26 5.13 No -3 0.72 No 25 0.42 Yes -24 0.38 No 46 28.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 32849599 - NM_001300958 BSDC1 1 1258.02 64.49 72 10.61 88.65 54 7.28 Yes 54 0.19 No 22 0.44 Yes -22 0.81 Yes 24 77.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32849599 - NM_001300958 BSDC1 1 9.2 0.42 19 10.61 88.65 54 7.28 Yes 54 0.19 No 22 0.44 Yes -22 0.81 Yes 24 77.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32849927 - NM_001300958 BSDC1 1 4.66 0.17 11 9.44 79.62 34 5.9 Yes 27 1.35 Yes 0 0 No -28 0.47 No 43 69.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 580312 + NM_001728 BSG 1 0.02 0.13 8 -7.42 70.95 27 6.86 Yes 36 0.47 No 0 0 No -26 0.86 Yes 28 51.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 580372 + NM_001728 BSG 1 0.02 0.15 7 -4.47 0 16 6.16 Yes 3 1.62 Yes 21 0.93 Yes -15 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 580655 + NM_001728 BSG 1 0.05 0.51 27 -0.98 0 13 4.36 No 11 1.8 Yes 0 0 No -38 0.75 Yes 47 58.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 581362 + NM_001728 BSG 1 0.01 0.1 7 2.58 0 13 4.36 No 59 1.14 Yes 0 0 No -29 0.35 No 43 50.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 582517 + NM_001728 BSG 1 0.09 0.74 37 -3.62 0 47 7.51 Yes 13 1.8 Yes 0 0 No -25 0.97 Yes 45 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17514167 - NM_004335 BST2 1 0.01 0.1 7 5.37 84.91 19 5 No 69 -3.59 No 22 0.87 Yes -27 0.59 No 43 37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 17514631 - NM_004335 BST2 1 0.04 0.58 28 -3.82 64.91 24 6.24 Yes 11 1.04 Yes 0 0 No -23 0.8 Yes 47 85.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17514633 - NM_004335 BST2 1 0.01 0.13 9 -16.03 0 22 6.08 Yes 9 1.06 Yes 0 0 No -21 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 17515219 - NM_004335 BST2 1 0.05 0.83 42 4.51 81.22 20 6.08 Yes 27 1.97 Yes 0 0 No -19 0.56 No 51 54.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93691208 + NM_003972 BTAF1 1 0.13 0.1 7 9.69 88.86 46 8.82 Yes 33 1.15 Yes 0 0 No -36 0.5 No 25 65.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93696521 + NM_003972 BTAF1 1 0.14 0.14 9 7.73 81.47 20 5.57 Yes 20 0.67 No 0 0 No -20 0.73 Yes 38 56.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 93703582 + NM_003972 BTAF1 1 0.39 0.57 26 8.81 83.85 38 6.54 Yes 71 -3.48 No 0 0 No -35 0.64 No 35 77.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 93705220 + NM_003972 BTAF1 1 1.27 1.81 59 9.05 80.14 33 8.44 Yes 33 0.86 Yes 0 0 No -32 0.83 Yes 38 63.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 93710614 + NM_003972 BTAF1 1 1.27 1.9 57 4.19 0 37 6.24 Yes 34 0.44 No 0 0 No -26 0.55 No 44 55.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 93711165 + NM_003972 BTAF1 1 0.84 1.26 48 -7.77 0 11 3.87 No 28 0.19 No 0 0 No -40 0.67 Yes 30 79.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 93714345 + NM_003972 BTAF1 1 0.39 0.64 34 6.82 86.87 50 8.19 Yes 37 0.08 No 0 0 No -50 0.19 No 21 30.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 93715074 + NM_003972 BTAF1 1 0.3 0.53 26 4.96 92.24 34 5.58 Yes 21 0.38 No 0 0 No -23 0.69 Yes 47 67.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 93719711 + NM_003972 BTAF1 1 0.07 0.14 9 -9.43 61.01 61 5.2 No 64 -3.38 No 25 0.45 Yes -25 0.83 Yes 45 60.5 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 93721484 + NM_003972 BTAF1 1 0.1 0.11 7 5.66 75.61 34 6.93 Yes 54 -0.92 No 0 0 No -33 0.6 No 37 85.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 93722322 + NM_003972 BTAF1 1 0.26 0.32 19 1.63 79.3 19 5.35 No 6 0.8 Yes 0 0 No -22 0.73 Yes 48 66.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 93723904 + NM_003972 BTAF1 1 0.14 0.21 14 0.79 62.13 18 4.5 No 68 0.66 No 0 0 No -17 0.83 Yes 53 80.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 93723944 + NM_003972 BTAF1 1 1.7 2.64 65 9.12 84.9 34 6.92 Yes 21 1.31 Yes 0 0 No -22 0.67 Yes 37 52.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 93737193 + NM_003972 BTAF1 1 0.07 0.13 8 6.28 83.63 26 4.13 No 13 0.53 No 0 0 No -20 0.77 Yes 50 70.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 93744765 + NM_003972 BTAF1 1 0.08 0.11 7 1.95 82.2 39 6.24 Yes 26 0.66 No 0 0 No -32 0.82 Yes 38 71.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 93756836 + NM_003972 BTAF1 1 8.82 11.92 72 -4.72 0 19 4.18 No 16 1.47 Yes 28 0.78 Yes -18 0.58 No 52 42.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 93765653 + NM_003972 BTAF1 1 0.11 0.25 14 9.45 86.83 42 8.32 Yes 61 -0.78 No 0 0 No -41 0.83 Yes 29 87.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 93766382 + NM_003972 BTAF1 1 0.06 0.14 9 5.78 84.85 32 6.82 Yes 5 0.17 No 0 0 No -29 0.27 No 39 31.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 93767883 + NM_003972 BTAF1 1 0.36 0.83 38 -2.2 0 26 6.3 Yes 13 0.35 No 0 0 No -28 0.41 No 42 58.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 93773372 + NM_003972 BTAF1 1 0.15 0.22 14 7.36 82.23 30 5.63 Yes 3 1.23 Yes 0 0 No -29 0.39 No 41 65.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93773469 + NM_003972 BTAF1 1 0.08 0.13 8 6.81 91.5 24 5.95 Yes 3 0.16 No 0 0 No -23 0.84 Yes 47 77.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 93785029 + NM_003972 BTAF1 1 0.14 0.21 12 -3.53 0 15 3.65 No 7 1.31 Yes 0 0 No -34 0.68 Yes 36 66.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 83687570 - NM_025238 BTBD1 1 0.14 0.33 19 -2 62.46 24 4.89 No 46 1.04 Yes 0 0 No -59 0.32 No 12 50.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 83689016 - NM_025238 BTBD1 1 0.08 0.22 15 1.97 0 18 6.07 Yes 30 0.82 Yes 0 0 No -27 0.92 Yes 43 87.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 83697481 - NM_025238 BTBD1 1 2.87 6.64 71 4.98 77.83 75 10.4 Yes 62 1.93 Yes 21 0.78 Yes -21 0.64 No 49 50.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 83699054 - NM_025238 BTBD1 1 0.11 0.28 16 4.78 75.06 19 5.99 Yes 33 0.59 No 0 0 No -18 0.57 No 52 76.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 13425563 - NM_032320 BTBD10 1 0.27 0.25 15 3.93 69.83 36 6.48 Yes 23 0.68 No 0 0 No -35 0.85 Yes 35 89.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 13426203 - NM_032320 BTBD10 1 2.32 2.1 59 6.79 84.84 29 5.74 Yes 16 0.8 Yes 0 0 No -28 0.59 No 42 85.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 13443363 - NM_032320 BTBD10 1 1.7 1.08 47 2.2 73.53 33 5.58 Yes 20 1.2 Yes 28 0.9 Yes -28 0.68 Yes 42 73.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 13443363 - NM_032320 BTBD10 1 0.43 0.28 16 2.2 73.53 33 5.58 Yes 20 1.2 Yes 28 0.9 Yes -28 0.68 Yes 42 73.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 13453015 - NM_032320 BTBD10 1 0.2 0.13 9 9.75 86.51 31 6.85 Yes 75 -4.1 No 0 0 No -31 0.57 No 39 64.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 13466701 - NM_032320 BTBD10 1 0.56 0.19 12 8.61 82.69 26 6.07 Yes 71 0.81 Yes 0 0 No -25 0.6 No 45 62.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 13481284 - NM_032320 BTBD10 1 0.59 0.19 10 5.55 77.79 41 5.18 No 48 0.43 No 24 0.61 Yes -26 0.6 No 44 70.24 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 13484345 - NM_032320 BTBD10 1 1.44 0.49 24 10.25 92.53 27 4.68 No 0 1.35 Yes 26 0.7 Yes -26 0.65 No 45 39.75 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 1992056 - NM_017797 BTBD2 1 0.84 1.17 46 5.24 90.92 26 5.66 Yes 62 0.47 No 25 0.87 Yes -25 0.72 Yes 45 73.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2013668 - NM_017797 BTBD2 1 0.32 0.21 12 2.5 75.92 19 4.8 No 70 -1.63 No 0 0 No -18 0.72 Yes 52 73.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2013718 - NM_017797 BTBD2 1 2.4 1.85 59 9.43 90.06 23 5.73 Yes 62 -1.97 No 0 0 No -22 0.89 Yes 48 77.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2013880 - NM_017797 BTBD2 1 1.24 0.96 41 8.49 83.16 36 6 Yes 23 1.11 Yes 27 0.34 Yes -30 0.6 No 35 55.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 105715518 + NM_033271 BTBD6 1 0.75 0.13 8 -12.6 61.11 16 5.83 Yes 3 0.4 No 21 0.7 Yes -24 0.56 No 22 43.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 105715916 + NM_033271 BTBD6 1 0.15 0.13 8 6.31 87.78 18 5.39 No 5 1.21 Yes 0 0 No -17 0.69 Yes 53 83.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 93708782 - NM_001002860 BTBD7 1 0.84 0.21 12 7.23 80.43 26 5.48 No 37 1.57 Yes 0 0 No -25 0.91 Yes 45 95.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 93717995 - NM_001002860 BTBD7 1 0.3 0.1 7 -2.33 0 38 6.94 Yes 25 1.04 Yes 0 0 No -24 0.85 Yes 46 84.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 93718654 - NM_001002860 BTBD7 1 1.25 0.51 28 7.14 85.05 28 6.8 Yes 15 0.64 No 0 0 No -27 0.8 Yes 43 85.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 93728171 - NM_001002860 BTBD7 1 0.36 0.13 8 4.9 74.03 37 6.24 Yes 24 0.38 No 0 0 No -36 0.66 No 34 71.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 93755054 - NM_001002860 BTBD7 1 63.08 15.13 72 9.11 92.13 26 5.38 No 68 1.54 Yes 25 0.57 Yes -25 0.7 Yes 45 70.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 93791212 - NM_001002860 BTBD7 1 13.59 2.38 58 12.03 91.32 30 7 Yes 17 1.81 Yes 0 0 No -29 0.92 Yes 41 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 93797738 - NM_001002860 BTBD7 1 0.76 0.15 10 4.8 70.01 22 5.03 No 70 0.36 No 0 0 No -21 0.91 Yes 49 81.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 72798305 + NM_001037637 BTF3 1 0.01 0.21 14 1.4 0 31 9.33 Yes 18 0.35 No 37 0.5 Yes -31 0.49 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 72798831 + NM_001037637 BTF3 1 0.02 0.6 29 7.04 92.34 20 5.41 No 76 -4.37 No 0 0 No -23 0.72 Yes 47 90.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 72799761 + NM_001037637 BTF3 1 0.03 0.78 36 8.75 93.23 43 5.91 Yes 30 1.66 Yes 0 0 No -30 0.61 No 39 60.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 72800990 + NM_001037637 BTF3 1 0.01 0.32 12 2.36 79.95 25 5 No 36 0.64 No 28 0.78 Yes -24 0.8 Yes 46 80.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 52524293 + NM_152265 BTF3L4 1 0.12 0.21 10 2.31 84.41 25 6.25 Yes 53 0.83 Yes 0 0 No -24 0.71 Yes 46 74.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52526099 + NM_152265 BTF3L4 1 0.18 0.33 17 7.99 90.49 25 5.85 Yes 62 0.72 No 30 0.84 Yes -24 0.74 Yes 40 58.83 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 52526180 + NM_152265 BTF3L4 1 0.09 0.17 8 5.91 78.61 36 5.3 No 50 1.23 Yes 0 0 No -29 0.74 Yes 41 73.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52536821 + NM_152265 BTF3L4 1 0.13 0.22 12 7.82 91.89 27 5.29 No 57 1.23 Yes 26 0.83 Yes -26 0.92 Yes 44 89.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 52539248 + NM_152265 BTF3L4 1 0.17 0.28 14 6.89 98.19 21 4.9 No 30 -1.58 No 0 0 No -25 0.73 Yes 45 65.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 92538510 - NM_001731 BTG1 1 0.01 0.11 8 6.85 74.27 24 5.2 No 11 0.24 No 0 0 No -23 0.64 No 47 63.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 92538987 - NM_001731 BTG1 1 0.02 0.15 9 -3.67 0 10 4 No 13 0.21 No 0 0 No -25 0.88 Yes 45 88.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 18971021 - NM_001130914 BTG3 1 1.77 0.17 10 7.43 86.23 28 5.12 No 0 1 Yes 0 0 No -27 0.56 No 43 50.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 18973841 - NM_001130914 BTG3 1 1.47 0.14 10 10.68 87.07 29 6.52 Yes 32 0.36 No 0 0 No -28 0.77 Yes 42 83.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 18973841 - NM_001130914 BTG3 1 6.52 0.71 34 10.68 87.07 29 6.52 Yes 32 0.36 No 0 0 No -28 0.77 Yes 42 83.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 18976592 - NM_001130914 BTG3 1 8.81 1.42 49 2.93 74.45 24 7.42 Yes 11 1.24 Yes 0 0 No -23 0.91 Yes 47 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 18979989 - NM_001130914 BTG3 1 0.23 0.35 16 3.87 81.11 24 6.08 Yes 71 0.39 No 0 0 No -30 0.5 No 48 68.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 18980515 - NM_001130914 BTG3 1 0.46 0.72 38 6.31 87.79 29 6.38 Yes 16 0.38 No 0 0 No -28 0.84 Yes 42 95.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 18984093 - NM_001130914 BTG3 1 6.2 3.97 68 6.58 87.9 34 6.78 Yes 21 0.2 No 33 0.5 Yes -33 0.85 Yes 37 86.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 100606115 - NM_001287344 BTK 1 0.18 0.42 21 3.21 74.68 34 5.99 Yes 8 1.15 Yes 0 0 No -33 0.87 Yes 37 86.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 100610487 - NM_001287344 BTK 1 0.05 0.13 7 10.11 85.83 24 6.63 Yes 11 1.25 Yes 0 0 No -23 0.97 Yes 47 96.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 100611338 - NM_001287344 BTK 1 0.21 0.57 30 7.33 83.02 16 5.24 No 3 1.63 Yes 0 0 No -27 0.82 Yes 43 81.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 100612016 - NM_001287344 BTK 1 0.04 0.11 7 6.73 86.61 26 5.39 No 27 0.99 Yes 0 0 No -22 0.72 Yes 48 84.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 100625089 - NM_001287344 BTK 1 0.04 0.11 7 -1.54 67.07 40 6.7 Yes -2 1.04 Yes 24 0.85 Yes -39 0.8 Yes 31 80.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 100629618 - NM_001287344 BTK 1 0.31 0.68 28 -6.12 0 42 6.84 Yes 39 1.42 Yes 0 0 No -41 0.4 No 29 78.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 100629621 - NM_001287344 BTK 1 0.23 0.43 26 -4.28 76.35 39 6.72 Yes 36 1.43 Yes 0 0 No -38 0.46 No 32 82.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 112185234 - NM_181780 BTLA 1 0.06 0.22 11 -2.64 0 22 3.96 No 14 0.19 No 25 0.77 Yes -22 0.78 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 112190221 - NM_181780 BTLA 1 2.06 5.42 72 6.53 76.88 12 5.25 No -1 2.01 Yes 29 0.66 Yes -26 0.65 No 49 70.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 112206426 - NM_181780 BTLA 1 0.4 0.97 44 9.11 92.41 34 5.36 No 21 0.96 Yes 0 0 No -26 0.63 No 37 65.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 112216877 - NM_181780 BTLA 1 0.05 0.13 8 5.35 78.14 36 6.44 Yes 33 1.11 Yes 0 0 No -35 0.93 Yes 35 90.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 26462996 + NM_078476 BTN2A1 1 0.97 0.15 8 5.75 77.39 22 5.29 No 52 0.07 No 28 0.28 Yes -21 0.84 Yes 49 87.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 26465445 + NM_078476 BTN2A1 1 0.72 0.28 16 7.66 83.55 26 5.1 No 73 0.85 Yes 28 0.25 Yes -25 0.9 Yes 45 87.68 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 26385195 + NM_001197237 BTN2A2 1 1.13 0.36 23 10.4 83.25 56 7.55 Yes 46 0.67 No 0 0 No -50 0.63 No 20 77.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 26388426 + NM_001197237 BTN2A2 1 0.38 0.19 8 5.17 73.84 25 6.17 Yes 12 1.94 Yes 0 0 No -24 0.58 No 46 90.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 26388426 + NM_001197237 BTN2A2 1 2.68 1.31 50 5.17 73.84 25 6.17 Yes 12 1.94 Yes 0 0 No -24 0.58 No 46 90.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 26392373 + NM_001197237 BTN2A2 1 2.81 1.22 50 5.24 75.29 38 7.63 Yes 25 0.38 No 0 0 No -27 0.85 Yes 43 91.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 26392449 + NM_001197237 BTN2A2 1 2.22 0.99 38 6.36 84.89 9 5 No 48 0.37 No 24 0.59 Yes -18 0.61 No 52 80.16 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 26393124 + NM_001197237 BTN2A2 1 1.42 0.71 34 7.7 85.83 34 4.38 No 24 1.16 Yes 0 0 No -31 0.51 No 39 67.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 26394525 + NM_001197237 BTN2A2 1 4.74 2.01 61 7.71 73.51 24 5.91 Yes 39 -3.13 No 23 0.83 Yes -23 0.85 Yes 47 90.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 26404767 + NM_001145009 BTN3A1 1 1.22 0.5 27 8.02 82.92 28 3.86 No 8 0.38 No 0 0 No -20 0.72 Yes 50 81.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 26405585 + NM_001145009 BTN3A1 1 0.65 0.28 18 3.5 74.42 22 5.1 No 61 -2.42 No 21 0.87 Yes -21 0.75 Yes 49 74.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 26405731 + NM_001145009 BTN3A1 1 0.28 0.13 8 4.59 71.33 17 5.57 Yes 32 -1.51 No 24 0.42 Yes -24 0.4 No 46 56.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 26405769 + NM_001145009 BTN3A1 1 1.4 0.53 24 7.71 79.07 26 5.48 No 70 -1.49 No 25 0.93 Yes -23 0.62 No 45 70.36 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 26408054 + NM_001145009 BTN3A1 1 11.98 1.75 57 1.27 79.06 14 4.9 No NA NA NA 25 0.31 Yes -25 0.51 No 45 38.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 26408919 + NM_001145009 BTN3A1 1 0.4 0.15 11 4 84.5 19 4.69 No 74 0.42 No 0 0 No -23 0.62 No 47 78.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 26410126 + NM_001145009 BTN3A1 1 0.3 0.11 7 1.6 0 38 6.3 Yes 32 1.52 Yes 0 0 No -37 0.51 No 33 70.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 26368948 + NM_001197246 BTN3A2 1 0.99 0.29 16 3.13 68.86 26 4.81 No 72 0.86 Yes 25 0.93 Yes -25 0.86 Yes 45 55.23 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 26373109 + NM_001197246 BTN3A2 1 3.24 1.82 53 4.16 77.27 9 4.99 No -4 0.78 Yes 23 0.74 Yes -21 0.46 No 49 39.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 26374181 + NM_001197246 BTN3A2 1 0.19 0.21 14 7.56 76.53 26 5.31 No 22 0.97 Yes 0 0 No -25 0.93 Yes 45 95.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 26443594 + NM_006994 BTN3A3 1 4.83 2.54 58 -3.58 0 13 4 No 33 0.35 No 24 0.79 Yes -12 0.76 Yes 58 60.1 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 26443868 + NM_006994 BTN3A3 1 6.65 1.69 58 8.41 88.26 31 6.99 Yes 18 1.38 Yes 30 0.91 Yes -30 0.92 Yes 40 90.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 26448553 + NM_006994 BTN3A3 1 0.68 0.24 16 7.7 89.61 23 6.48 Yes 55 -2.45 No 0 0 No -22 0.69 Yes 48 78.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 26448849 + NM_006994 BTN3A3 1 0.45 0.13 8 -3.29 0 46 8.96 Yes 33 2.04 Yes 0 0 No -52 0.42 No 25 69.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 26451187 + NM_006994 BTN3A3 1 7.38 2.5 64 9.8 86.17 45 6.93 Yes 32 0.83 Yes 0 0 No -44 0.53 No 27 58.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 26451459 + NM_006994 BTN3A3 1 0.6 0.19 13 11.29 89.94 24 5.8 Yes 68 0.83 Yes 0 0 No -23 0.84 Yes 47 89.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 26453017 + NM_006994 BTN3A3 1 0.89 0.32 16 8.45 90.07 20 6.16 Yes 7 1.52 Yes 0 0 No -19 0.91 Yes 51 95.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 26453037 + NM_006994 BTN3A3 1 3.22 1.06 43 11.62 97.5 17 5.39 No 27 1.73 Yes 0 0 No -22 0.54 No 48 70.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 103124850 + NM_003939 BTRC 1 1.23 0.11 7 8.76 84.59 61 7.5 Yes 42 1.03 Yes 0 0 No -30 0.33 No 16 23.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 103167197 + NM_003939 BTRC 1 24.01 1.81 57 5.53 78.36 46 6.9 Yes 23 1.27 Yes 0 0 No -35 0.68 Yes 35 72.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103167507 + NM_003939 BTRC 1 2.33 0.18 12 2.36 0 38 7.53 Yes 47 1.37 Yes 0 0 No -37 0.64 No 33 78.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 103190101 + NM_003939 BTRC 1 176.15 13.22 72 8.23 86.71 22 5.1 No 24 1 Yes 21 0.89 Yes -21 0.95 Yes 49 96.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 103213257 + NM_003939 BTRC 1 1.23 0.11 7 8.12 86.7 21 4.92 No 8 0.58 No 23 0.77 Yes -23 0.77 Yes 47 76.05 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 103282677 + NM_003939 BTRC 1 0.18 0.1 7 5.44 86.29 23 3.95 No 66 0.63 No 0 0 No -23 0.54 No 47 68.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 111399267 - NM_004336 BUB1 1 0.11 0.22 15 6.55 83.88 28 4.34 No 15 0.14 No 0 0 No -30 0.94 Yes 40 96.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 111399422 - NM_004336 BUB1 1 0.61 1.11 45 9.64 89.15 19 5.92 Yes 60 0 No 28 0.4 Yes -18 0.63 No 52 79.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 111410939 - NM_004336 BUB1 1 0.14 0.29 15 7.41 82.41 26 8.43 Yes 13 1.76 Yes 0 0 No -25 0.83 Yes 45 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 111414710 - NM_004336 BUB1 1 0.81 1.64 51 5.88 74.33 27 4.1 No 42 0.78 Yes 24 0.71 Yes -26 0.77 Yes 44 90.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 111416075 - NM_004336 BUB1 1 0.05 0.11 7 5.85 80.85 26 2.79 No 30 0.28 No 0 0 No -26 0.42 No 22 87.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 111417629 - NM_004336 BUB1 1 0.22 0.4 22 -0.41 0 21 4.47 No 8 -2.45 No 18 0.91 Yes -20 0.49 No 38 57.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 111427127 - NM_004336 BUB1 1 0.08 0.21 12 1.84 0 39 9.26 Yes 41 1.45 Yes 0 0 No -53 0.34 No 31 59.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40458559 + NM_001211 BUB1B 1 0.61 0.76 34 11.32 88.27 36 7 Yes 23 0.77 Yes 35 0.48 Yes -35 0.61 No 35 52.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 40466086 + NM_001211 BUB1B 1 0.16 0.11 8 9.94 91.02 40 6.32 Yes 67 0.81 Yes 0 0 No -24 0.9 Yes 46 94.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40468583 + NM_001211 BUB1B 1 3.17 2.56 64 7.12 98.37 23 4.74 No 63 1.2 Yes 0 0 No -22 0.45 No 45 55.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40477732 + NM_001211 BUB1B 1 0.29 0.19 13 2.4 67.96 19 4.08 No 56 0.56 No 26 0.83 Yes -26 0.6 No 49 37.19 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 40479129 + NM_001211 BUB1B 1 0.3 0.38 21 9.78 90.78 36 5.94 Yes 47 0.4 No 35 0.24 Yes -35 0.5 No 35 72.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 40481381 + NM_001211 BUB1B 1 0.07 0.1 7 9.84 87.64 53 7.96 Yes 35 0.38 No 0 0 No -48 0.43 No 25 64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40494590 + NM_001211 BUB1B 1 5.36 6.18 67 -4.18 0 16 4.47 No 42 0.53 No 21 0.69 Yes -21 0.56 No 49 59.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 40494650 + NM_001211 BUB1B 1 2.32 2.51 66 8.11 93.5 19 4.53 No 6 0.47 No 0 0 No -18 0.9 Yes 52 77.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40501867 + NM_001211 BUB1B 1 0.16 0.15 10 2.67 75.66 17 4.99 No 41 1.06 Yes 0 0 No -20 0.88 Yes 50 83.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40505605 + NM_001211 BUB1B 1 0.07 0.11 8 1.49 73.84 35 6.18 Yes 13 0.5 No 0 0 No -25 0.48 No 36 48.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40510660 + NM_001211 BUB1B 1 0.39 0.4 22 1.57 0 27 6.15 Yes 14 1.2 Yes 18 0.61 Yes -26 0.76 Yes 44 84.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 124914466 + NM_004725 BUB3 1 0.48 2.61 61 -7.02 0 13 4.24 No 8 0.24 No 0 0 No -20 0.61 No 50 48.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 124916849 + NM_004725 BUB3 1 0.08 0.46 25 8 87.2 18 6 Yes 5 0.42 No 0 0 No -21 0.75 Yes 49 74.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 124917245 + NM_004725 BUB3 1 0.04 0.26 15 -10.43 0 44 6.78 Yes 66 0.56 No 0 0 No -37 0.44 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 124919938 + NM_004725 BUB3 1 0.04 0.29 14 2.83 78.99 21 4.96 No 18 0.69 No 0 0 No -41 0.49 No 50 54.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 124924562 + NM_004725 BUB3 1 62.32 228.97 72 10.93 97.45 36 6.55 Yes 23 1.28 Yes 22 0.59 Yes -30 0.38 No 40 61.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 116627060 - NM_032725 BUD13 1 3.8 1.9 56 6.58 78.03 21 5.66 Yes 8 1.05 Yes 0 0 No -20 0.77 Yes 50 87.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 116636392 - NM_032725 BUD13 1 0.27 0.17 11 5.67 88.93 24 4.58 No -2 0.54 No 0 0 No -23 0.73 Yes 47 81.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99007659 + NM_003910 BUD31 1 2.79 1.89 64 -0.97 73.74 26 4.38 No 63 0.47 No 27 0.56 Yes -25 0.49 No 45 73.38 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 99009372 + NM_003910 BUD31 1 0.32 1.11 48 8.41 92.03 27 5.2 No 36 1.36 Yes 26 0.84 Yes -26 0.35 No 18 58.01 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 99012672 + NM_003910 BUD31 1 0.08 0.32 17 2.78 0 18 4.24 No 22 -2.81 No 0 0 No -17 0.8 Yes 53 44.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 99013769 + NM_003910 BUD31 1 0.05 0.19 11 -0.42 0 12 4.24 No 72 -2.87 No 0 0 No -30 0.47 No 40 74.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 41895096 + NM_004053 BYSL 1 0.31 0.29 13 6.82 71.36 31 6.07 Yes 30 1.46 Yes 25 0.79 Yes -30 0.82 Yes 40 93.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 41899155 + NM_004053 BYSL 1 0.19 0.33 19 6.21 78.56 28 5.57 Yes -4 1.36 Yes 0 0 No -29 0.55 No 62 49.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 41899441 + NM_004053 BYSL 1 0.3 0.4 21 5.2 78.02 29 8.54 Yes 16 1.77 Yes 29 0.84 Yes -29 0.87 Yes 41 81.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 201680390 + NM_001207068 BZW1 1 0.02 0.25 15 -12.15 0 44 6.41 Yes 31 0.68 No 0 0 No -43 0.71 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 201680395 + NM_001207068 BZW1 1 0.01 0.11 7 2.81 0 14 3.87 No 36 0.66 No 0 0 No -48 0.6 No 22 80.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 201682699 + NM_001207068 BZW1 1 0.06 0.24 15 -13.85 76.46 26 5.12 No 9 0.53 No 0 0 No -25 0.9 Yes 45 86.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 201682705 + NM_001207068 BZW1 1 0.04 0.15 10 -9.36 0 14 3.87 No 15 0.51 No 0 0 No -31 0.9 Yes 39 85.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 201685893 + NM_001207068 BZW1 1 0.19 0.88 34 -18.56 59.24 22 4.3 No -2 0.32 No 23 0.73 Yes -21 0.42 No 60 61.19 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 201685911 + NM_001207068 BZW1 1 0.06 0.26 15 -4.25 0 9 3.87 No 16 0.74 No 0 0 No -24 0.64 No 46 58.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 50374002 - NM_001288743 C10orf128 1 0.57 0.19 11 0.14 63.81 42 5.95 Yes 13 0.55 No 0 0 No -25 0.69 Yes 45 65.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 50391020 - NM_001288743 C10orf128 1 2.03 0.69 31 12.76 92.45 25 5.83 Yes 63 1.53 Yes 0 0 No -24 0.81 Yes 46 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103624107 - NM_024541 C10orf76 1 0.35 0.31 18 8.73 85.25 22 6.12 Yes 25 0 No 0 0 No -21 0.56 No 46 53.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 103631748 - NM_024541 C10orf76 1 0.24 0.18 8 -1.34 80.72 34 9.95 Yes 21 0.85 Yes 0 0 No -33 0.97 Yes 37 97.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103631750 - NM_024541 C10orf76 1 1.33 1.13 46 0.15 83.78 32 9.85 Yes 19 0.85 Yes 0 0 No -31 0.97 Yes 39 97.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103637681 - NM_024541 C10orf76 1 0.62 0.61 30 6.02 85.39 27 5.32 No 24 0.52 No 0 0 No -26 0.5 No 44 49.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 103640042 - NM_024541 C10orf76 1 0.66 0.63 26 7.86 83.62 30 5.97 Yes 56 -2.7 No 0 0 No -29 0.88 Yes 41 88.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 103664208 - NM_024541 C10orf76 1 0.18 0.17 9 11.04 94.82 26 5.38 No 64 0.31 No 0 0 No -25 0.56 No 45 74.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 103689852 - NM_024541 C10orf76 1 0.18 0.15 10 9.35 97.96 18 7.21 Yes 49 0.81 Yes 0 0 No -27 0.84 Yes 43 90.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103732264 - NM_024541 C10orf76 1 1.39 0.92 36 9.36 85.17 29 7.65 Yes 16 1.79 Yes 0 0 No -28 0.97 Yes 42 96.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103749119 - NM_024541 C10orf76 1 0.46 0.38 22 8.63 88.68 29 5.13 No 16 0.05 No 0 0 No -28 0.84 Yes 42 78.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 103752859 - NM_024541 C10orf76 1 1.84 1.64 52 10.28 93.87 22 7.28 Yes 9 1.22 Yes 0 0 No -21 0.91 Yes 49 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103752859 - NM_024541 C10orf76 1 0.16 0.13 9 10.28 93.87 22 7.28 Yes 9 1.22 Yes 0 0 No -21 0.91 Yes 49 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103764241 - NM_024541 C10orf76 1 0.39 0.29 17 6.55 84.45 19 4.97 No 6 0.89 Yes 0 0 No -26 0.67 Yes 44 52.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 103771537 - NM_024541 C10orf76 1 0.25 0.15 10 -0.57 0 26 5.17 No 19 0.63 No 0 0 No -25 0.74 Yes 45 58.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 103771555 - NM_024541 C10orf76 1 0.98 0.58 28 -2.58 0 14 4.36 No 33 -3.53 No 21 0.72 Yes -30 0.36 No 57 30.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 103774562 - NM_024541 C10orf76 1 0.57 0.43 21 8.57 81.84 24 5.41 No 1 1.1 Yes 0 0 No -23 0.81 Yes 47 80.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103774600 - NM_024541 C10orf76 1 0.44 0.32 13 10.63 78.22 33 7.21 Yes 64 0.57 No 0 0 No -28 0.53 No 42 66.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 103784569 - NM_024541 C10orf76 1 0.28 0.26 16 3.01 0 26 5.6 Yes 13 0.98 Yes 0 0 No -29 0.67 Yes 41 67.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 103788944 - NM_024541 C10orf76 1 0.54 0.29 19 6.54 76.35 26 4.35 No 47 1.02 Yes 0 0 No -25 0.93 Yes 45 79.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103813982 - NM_024541 C10orf76 1 0.36 0.14 9 5.18 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -27 0.45 No 54 63.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 103814589 - NM_024541 C10orf76 1 0.56 0.25 17 3.6 85.02 17 6.4 Yes 4 1.2 Yes 0 0 No -29 0.61 No 43 60.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 124701312 - NM_024942 C10orf88 1 0.43 0.18 10 5.86 76.63 29 8.46 Yes 16 1.46 Yes 0 0 No -29 0.61 No 46 43.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 124708272 - NM_024942 C10orf88 1 2.31 0.75 37 7.22 83.45 21 4.43 No 52 -2.28 No 20 0.82 Yes -20 0.95 Yes 50 92.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 124712545 - NM_024942 C10orf88 1 1.93 0.51 27 1.8 0 30 6.32 Yes 17 1.25 Yes 25 0.86 Yes -21 0.64 No 33 71.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 111752208 + NM_022761 C11orf1 1 1.48 1.35 49 -1.66 82.5 29 7.57 Yes 7 0.9 Yes 28 0.81 Yes -28 0.81 Yes 42 86.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 111753093 + NM_022761 C11orf1 1 0.12 0.13 7 -2.54 78.15 30 5.99 Yes 17 1.03 Yes 0 0 No -33 0.66 Yes 40 50.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 111753097 + NM_022761 C11orf1 1 0.15 0.13 9 -4.59 0 9 3.87 No 21 1.02 Yes 0 0 No -37 0.7 Yes 36 55.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 68031183 - NM_022338 C11orf24 1 1.18 1.79 54 4.24 74.99 33 7.21 Yes 20 0.75 No 32 0.9 Yes -32 0.96 Yes 38 96.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 68034788 - NM_022338 C11orf24 1 0.93 1.28 34 5.73 89.25 23 4.63 No 52 -2.14 No 0 0 No -22 0.76 Yes 48 84.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 68034866 - NM_022338 C11orf24 1 3.62 5.03 42 6.4 89.86 25 5.1 No 12 1.01 Yes 24 0.96 Yes -24 0.97 Yes 46 97.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 68035154 - NM_022338 C11orf24 1 0.27 0.36 22 6.89 86.16 20 6.08 Yes 74 0.23 No 20 0.25 Yes -30 0.48 No 47 57.14 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68038413 - NM_022338 C11orf24 1 0.18 0.22 14 7.43 74.13 31 5.16 No 58 -4.35 No 0 0 No -30 0.58 No 40 54.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 46969576 + NM_001003678 C11orf49 1 1.23 0.49 22 6.17 73.94 29 6.61 Yes 16 0.53 No 28 0.8 Yes -28 0.84 Yes 42 77.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47013093 + NM_001003678 C11orf49 1 1.4 0.6 30 8.9 89.69 24 5.2 No 17 0.21 No 23 0.78 Yes -23 0.86 Yes 47 53.67 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 47032417 + NM_001003678 C11orf49 1 0.29 0.13 9 8.26 80.67 38 7.69 Yes 10 0.92 Yes 0 0 No -37 0.7 Yes 33 79.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47044889 + NM_001003678 C11orf49 1 0.81 0.33 18 7.79 85.7 30 5.16 No 69 -3.4 No 29 0.54 Yes -30 0.8 Yes 40 86.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47087013 + NM_001003678 C11orf49 1 0.24 0.11 7 8.01 86.79 19 5.48 No 6 1.16 Yes 0 0 No -18 0.67 Yes 52 84.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47101349 + NM_001003678 C11orf49 1 1.56 0.69 34 9.16 91.12 29 6.69 Yes 16 0.69 No 0 0 No -28 0.75 Yes 42 49.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 47130604 + NM_001003678 C11orf49 1 1.29 0.6 29 9.91 78.36 25 4.6 No 12 0.88 Yes 27 0.72 Yes -24 0.7 Yes 46 71.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47158866 + NM_001003678 C11orf49 1 1.42 0.71 31 7.6 90.99 15 5.51 No 2 1.03 Yes 29 0.84 Yes -29 0.83 Yes 41 91.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47181180 + NM_001003678 C11orf49 1 1.47 0.6 28 7.93 87.48 22 8.5 Yes 9 1.28 Yes 27 0.7 Yes -24 0.63 No 49 73.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 47181183 + NM_001003678 C11orf49 1 1.83 0.72 37 3.84 72.82 25 8.67 Yes 12 1.27 Yes 27 0.7 Yes -24 0.62 No 46 77.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 93483213 + NM_001286067 C11orf54 1 0.29 0.29 16 8.12 86.14 26 3.9 No 21 0.88 Yes 0 0 No -25 0.48 No 45 50.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 93491178 + NM_001286067 C11orf54 1 0.53 0.38 22 7.72 83.78 25 6.16 Yes 70 0.32 No 0 0 No -24 0.6 No 46 78.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 111953191 + NR_103469 C11orf57 1 16.1 15.65 72 3.01 80.99 35 4.66 No 5 1 Yes 22 0.38 Yes -25 0.36 No 45 47.74 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 16765130 + NM_014267 C11orf58 1 0.27 1.93 53 6.22 78.41 25 5.44 No 26 1.44 Yes 0 0 No -24 0.89 Yes 46 80.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 16769644 + NM_014267 C11orf58 1 0.04 0.28 14 -14.95 0 25 6.92 Yes 12 1.59 Yes 0 0 No -24 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 16771776 + NM_014267 C11orf58 1 0.03 0.18 11 -0.09 69.32 45 5.93 Yes 32 0.62 No 0 0 No -40 0.51 No 30 92.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 16772367 + NM_014267 C11orf58 1 0.05 0.25 15 5.53 78.55 30 6.78 Yes 17 0.39 No 0 0 No -29 0.82 Yes 41 76.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 16775430 + NM_014267 C11orf58 1 0.02 0.11 8 6.53 86.16 20 5.57 Yes 66 1.52 Yes 19 0.67 Yes -19 0.6 No 51 71.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 16776395 + NM_014267 C11orf58 1 0.05 0.31 13 3.11 82.29 18 6.4 Yes 5 1.62 Yes 26 0.77 Yes -34 0.55 No 36 73.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 16776421 + NM_014267 C11orf58 1 0.09 0.56 34 -2.7 0 18 5.28 No 31 1.61 Yes 0 0 No -30 0.62 No 40 63.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65685687 - NM_001135635 C11orf68 1 221.4 25.22 72 5.84 87.32 21 6.31 Yes 8 2.15 Yes 30 0.84 Yes -20 0.72 Yes 50 69.43 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 66520108 + NM_024650 C11orf80 1 3.82 0.26 17 6.15 83.48 20 7.21 Yes 7 1.21 Yes 0 0 No -19 0.77 Yes 51 88.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66520108 + NM_024650 C11orf80 1 13.94 0.96 36 6.15 83.48 20 7.21 Yes 7 1.21 Yes 0 0 No -19 0.77 Yes 51 88.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66524227 + NM_024650 C11orf80 1 1.39 0.21 11 4.64 76.83 29 5.92 Yes 16 0.36 No 0 0 No -28 0.81 Yes 42 76.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66529549 + NM_024650 C11orf80 1 60.83 9.39 72 7.55 84.83 23 5 No 10 1.44 Yes 22 0.91 Yes -22 0.85 Yes 48 92.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66529630 + NM_024650 C11orf80 1 0.82 0.13 8 6.01 87.34 43 7.55 Yes 3 0.83 Yes 0 0 No -42 0.69 Yes 38 66.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 66529674 + NM_024650 C11orf80 1 9.34 1.53 50 3.63 72.01 39 4.26 No 47 0.85 Yes 0 0 No -38 0.41 No 32 59.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 66545582 + NM_024650 C11orf80 1 11.53 1.79 57 8.63 85.05 45 8.98 Yes 32 2.06 Yes 0 0 No -44 0.82 Yes 26 84.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66556815 + NM_024650 C11orf80 1 0.76 0.11 7 10.46 90.02 26 4.4 No 13 0.86 Yes 0 0 No -25 0.53 No 49 56.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 66563890 + NM_024650 C11orf80 1 0.58 0.19 11 5.12 91.39 22 3.91 No 20 0.86 Yes 0 0 No -21 0.87 Yes 49 85.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66563973 + NM_024650 C11orf80 1 0.51 0.14 7 1.62 76.96 23 4.39 No 38 0.7 No 0 0 No -22 0.6 No 20 41.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 66571465 + NM_024650 C11orf80 1 1.15 0.14 8 7.52 87.71 21 6.31 Yes 8 0.88 Yes 20 0.61 Yes -26 0.75 Yes 44 70.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66571465 + NM_024650 C11orf80 1 7.49 0.71 32 7.52 87.71 21 6.31 Yes 8 0.88 Yes 20 0.61 Yes -26 0.75 Yes 44 70.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66569960 + NM_024650 C11orf80 1 1.75 0.18 10 6.47 87.82 26 6.9 Yes 13 0.62 No 0 0 No -25 0.75 Yes 45 83.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66571465 + NM_024650 C11orf80 1 231.83 22.54 72 7.52 87.71 21 6.31 Yes 8 0.88 Yes 20 0.61 Yes -26 0.75 Yes 44 70.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66596186 + NM_024650 C11orf80 1 3.58 0.65 30 7.15 77.4 45 7.39 Yes 20 0.83 Yes 23 0.85 Yes -39 0.41 No 31 63.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 66598725 + NM_024650 C11orf80 1 1.15 0.21 14 8.81 86.45 22 4.9 No 9 1.2 Yes 0 0 No -21 0.75 Yes 49 62.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 66605840 + NM_024650 C11orf80 1 76.45 14.47 72 4.97 86.37 29 5.49 No 2 1.15 Yes 25 0.91 Yes -28 0.91 Yes 42 95.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66606602 + NM_024650 C11orf80 1 7.33 1.92 60 7.38 84.84 31 5.95 Yes 18 0.95 Yes 30 0.88 Yes -30 0.77 Yes 40 89.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 63590060 + NM_138471 C11orf84 1 0.59 0.42 24 2.77 0 35 5.88 Yes 22 0.61 No 28 0.72 Yes -28 0.79 Yes 42 60.48 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 63590102 + NM_138471 C11orf84 1 6.97 5.08 70 2.57 71.64 21 5 No 25 1.71 Yes 0 0 No -20 0.74 Yes 50 83.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63590108 + NM_138471 C11orf84 1 0.25 0.15 11 2.89 0 10 3.87 No 31 1.71 Yes 0 0 No -26 0.73 Yes 44 77.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63590262 + NM_138471 C11orf84 1 2.78 2.14 59 5.07 81.4 29 7.14 Yes 33 2.18 Yes 28 0.89 Yes -28 0.92 Yes 42 93.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 63594437 + NM_138471 C11orf84 1 4.28 3.13 66 1.65 81.75 41 6.86 Yes 54 2.42 Yes 0 0 No -40 0.26 No 55 25.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 53699985 + NM_021640 C12orf10 1 0.41 0.44 25 1.88 0 22 6.31 Yes 9 1.42 Yes 0 0 No -21 0.58 No 40 63.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 53700443 + NM_021640 C12orf10 1 0.52 0.65 36 4.17 74.12 17 3.64 No 65 1.42 Yes 22 0.69 Yes -21 0.44 No 49 62.49 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 88429818 + NM_001009894 C12orf29 1 1.02 0.54 29 11.83 92.76 24 5.29 No 21 1.01 Yes 23 0.77 Yes -21 0.5 No 41 70.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 88431720 + NM_001009894 C12orf29 1 0.29 0.17 11 8.24 86.37 30 7.35 Yes 17 0.82 Yes 0 0 No -29 0.96 Yes 41 96.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 88440589 + NM_001009894 C12orf29 1 0.12 0.13 8 -1.33 0 13 2.71 No 15 1.13 Yes 0 0 No -27 0.89 Yes 43 93.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 4611649 - NM_020374 C12orf4 1 0.16 0.17 9 6.26 83.12 49 7.4 Yes 36 0.42 No 32 0.41 Yes -32 0.61 No 38 66.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 4615209 - NM_020374 C12orf4 1 0.18 0.19 13 4.74 81.23 27 6.46 Yes 14 1.07 Yes 0 0 No -33 0.47 No 37 66.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 4618177 - NM_020374 C12orf4 1 0.12 0.15 10 5.36 68.13 30 8.65 Yes 17 2.32 Yes 0 0 No -29 0.89 Yes 41 92.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 4638667 - NM_020374 C12orf4 1 0.75 0.46 20 10.27 91.13 27 8.96 Yes 14 1.76 Yes 0 0 No -27 0.46 No 43 43.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 4641112 - NM_020374 C12orf4 1 0.18 0.18 11 5.86 78.68 46 5.5 No 26 0.68 No 0 0 No -38 0.82 Yes 32 87.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 4645378 - NM_020374 C12orf4 1 4.01 2.17 58 2.48 0 11 4.12 No 16 1.4 Yes 23 0.89 Yes -31 0.71 Yes 39 73.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 4646681 - NM_020374 C12orf4 1 0.35 0.19 10 8.36 91.86 25 5.71 Yes 24 1.05 Yes 0 0 No -24 0.46 No 46 53.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 121442293 - NM_001286197 C12orf43 1 57.2 20.17 72 3.34 78.86 28 5.48 No 15 1.55 Yes 24 0.98 Yes -27 0.92 Yes 43 96.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 121442864 - NM_001286197 C12orf43 1 0.63 0.32 20 -2.08 81.37 42 6.44 Yes 43 1.21 Yes 35 0.77 Yes -35 0.9 Yes 35 90.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 121450487 - NM_001286197 C12orf43 1 0.34 0.15 8 4.23 80.64 21 5.66 Yes 8 1.06 Yes 0 0 No -20 0.69 Yes 50 88.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 105386109 + NM_152318 C12orf45 1 0.39 0.53 24 3.98 80.09 23 4.59 No 10 0.7 No 0 0 No -22 0.65 No 48 73.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 117168424 - NM_024738 C12orf49 1 0.43 0.25 17 5.2 78.22 13 4.49 No 74 -6.22 No 0 0 No -27 0.42 No 43 67.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 117168536 - NM_024738 C12orf49 1 0.38 0.24 11 5.22 78.09 21 4.9 No -1 0.59 No 0 0 No -20 0.82 Yes 50 90.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 117172468 - NM_024738 C12orf49 1 0.26 0.18 12 9.84 80.96 15 6.52 Yes 2 1.66 Yes 0 0 No -28 0.74 Yes 42 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 117173102 - NM_024738 C12orf49 1 0.73 0.43 23 9.27 82.65 26 7.24 Yes 13 1.91 Yes 0 0 No -31 0.3 No 39 51.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 7053638 + NM_001301838 C12orf57 1 4254.4 485.53 72 2.49 78.06 84 10.23 Yes 71 1.63 Yes 24 0.26 Yes -24 0.45 No 40 33.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 104347313 - NM_001135570 C12orf73 1 16.17 6.9 72 6.71 85.04 30 6.35 Yes 71 0.98 Yes 29 0.8 Yes -20 0.54 No 41 79.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 104348747 - NM_001135570 C12orf73 1 1.48 0.64 31 9.4 92.71 23 5.09 No 39 -2.87 No 22 0.85 Yes -22 0.77 Yes 48 60.17 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 105742388 + NM_001145199 C12orf75 1 0.04 0.11 7 3.16 0 12 4.24 No 70 -2.24 No 0 0 No -34 0.37 No 32 47.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105759589 + NM_001145199 C12orf75 1 0.23 0.6 26 0.88 0 31 5.92 Yes 2 0.96 Yes 0 0 No -30 0.94 Yes 40 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 105759711 + NM_001145199 C12orf75 1 0.05 0.15 10 2.81 71.37 10 5.26 No 53 -5.31 No 0 0 No -30 0.53 No 40 52.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105761254 + NM_001145199 C12orf75 1 0.75 4.38 66 -0.93 0 30 6.82 Yes 25 1.2 Yes 24 0.85 Yes -29 0.5 No 41 66.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 76117997 - NM_007176 C14orf1 1 0.05 0.11 7 -2.89 0 10 4 No -3 -1.37 No 24 0.94 Yes -23 0.42 No 52 35.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 76121474 - NM_007176 C14orf1 1 0.11 0.26 14 8.66 81.9 29 5.76 Yes 16 0.74 No 0 0 No -28 0.97 Yes 42 97.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 76123679 - NM_007176 C14orf1 1 0.1 0.24 13 8.98 84.33 25 5.36 No 52 -2.88 No 0 0 No -24 0.66 No 46 69.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 57947487 - NM_001283060 C14orf105 1 0.47 0.35 21 3.03 76.22 12 5.2 No -1 0.86 Yes 18 0.6 Yes -29 0.49 No 41 33.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 23565830 + NM_017924 C14orf119 1 0.07 0.14 9 6.4 79.95 60 8.89 Yes 20 0.69 No 0 0 No -59 0.84 Yes 11 67.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 23566850 + NM_017924 C14orf119 1 0.49 0.97 46 -8.34 0 20 4.36 No 60 0.53 No 20 0.59 Yes -42 0.73 Yes 28 77.39 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23566978 + NM_017924 C14orf119 1 0.81 1.65 52 7.18 83.13 39 7.87 Yes 26 2.37 Yes 0 0 No -38 0.76 Yes 32 94.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91631590 + NM_001286471 C14orf159 1 0.13 0.14 9 4.79 73.33 48 7.19 Yes 35 0.71 No 25 0.81 Yes -25 0.6 No 45 57.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 91633812 + NM_001286471 C14orf159 1 6.42 2.53 62 4.4 83.71 22 6.4 Yes 75 -3.36 No 21 0.82 Yes -21 0.61 No 49 86.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 91633867 + NM_001286471 C14orf159 1 1.34 0.53 28 3.16 81.22 20 4.08 No 0 1 Yes 19 0.74 Yes -19 0.87 Yes 51 87.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 91636326 + NM_001286471 C14orf159 1 0.63 0.24 14 0.18 73.43 21 5 No 21 -2.12 No 22 0.53 Yes -20 0.67 Yes 46 49.57 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 91639889 + NM_001286471 C14orf159 1 1.1 0.5 22 3.13 72.83 28 7.04 Yes 15 0.86 Yes 0 0 No -50 0.36 No 40 49.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 91640007 + NM_001286471 C14orf159 1 0.32 0.15 10 10.14 97.24 32 6.16 Yes 19 0.7 No 31 0.8 Yes -31 0.61 No 39 84.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 91641188 + NM_001286471 C14orf159 1 0.21 0.1 7 7.45 84.23 14 6.1 Yes 23 1.14 Yes 0 0 No -28 0.89 Yes 42 83.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91653667 + NM_001286471 C14orf159 1 0.31 0.17 9 10.13 93.79 26 6.08 Yes 75 0.83 Yes 0 0 No -25 0.71 Yes 45 75.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91654012 + NM_001286471 C14orf159 1 0.58 0.33 15 10.07 88.37 23 5.38 No 28 0.48 No 0 0 No -22 0.7 Yes 43 67.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 91655331 + NM_001286471 C14orf159 1 0.83 0.47 26 6.36 74.4 35 6.32 Yes 22 1.15 Yes 34 0.67 Yes -34 0.76 Yes 36 83.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 91655429 + NM_001286471 C14orf159 1 0.59 0.31 15 10.17 92.98 35 5.91 Yes 54 -2.57 No 0 0 No -34 0.5 No 36 77.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 91655613 + NM_001286471 C14orf159 1 0.4 0.32 19 5.56 88.32 20 4.8 No 20 -0.99 No 0 0 No -23 0.69 Yes 50 68.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 91655959 + NM_001286471 C14orf159 1 2.46 1.94 56 6.34 82.91 22 5.29 No 68 -3.41 No 0 0 No -25 0.54 No 42 41.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 91655999 + NM_001286471 C14orf159 1 1.71 1.4 40 3.16 72.09 19 5.74 Yes 6 0.96 Yes 0 0 No -19 0.73 Yes 51 76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91656058 + NM_001286471 C14orf159 1 2.46 1.89 57 10.4 88.79 21 7.01 Yes 8 1.91 Yes 0 0 No -20 0.89 Yes 50 82.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91668788 + NM_001286471 C14orf159 1 0.38 0.32 14 2.87 83.97 24 5.2 No 11 0.77 Yes 0 0 No -23 0.97 Yes 47 98.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91669315 + NM_001286471 C14orf159 1 0.82 0.67 27 5.81 86.35 47 8.12 Yes 34 1.38 Yes 0 0 No -46 0.75 Yes 24 88.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91670041 + NM_001286471 C14orf159 1 0.52 0.43 19 12.22 88.27 38 6.48 Yes 25 0.86 Yes 0 0 No -37 0.92 Yes 33 85.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91683377 + NM_001286471 C14orf159 1 0.33 0.11 7 3.18 74.44 33 5.55 No 38 -0.97 No 0 0 No -32 0.49 No 40 41.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 91688566 + NM_001286471 C14orf159 1 0.82 0.26 12 4.86 80.97 27 6.65 Yes 62 1.35 Yes 0 0 No -26 0.94 Yes 44 87.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91690019 + NM_001286471 C14orf159 1 2.52 0.99 42 7.38 91.97 27 6.12 Yes 46 -1.26 No 29 0.35 Yes -26 0.37 No 46 50.15 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 91690022 + NM_001286471 C14orf159 1 3.63 1.32 45 7.13 91.1 30 6.35 Yes -4 0.35 No 29 0.35 Yes -27 0.36 No 43 54.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 52471058 + NM_016039 C14orf166 1 0.02 0.21 12 0.29 68.12 37 6.04 Yes 64 0.1 No 27 0.73 Yes -27 0.56 No 43 69.23 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 104379026 - NM_004894 C14orf2 1 0.03 0.39 19 -0.44 0 12 3.87 No 70 0.67 No 0 0 No -28 0.49 No 42 67.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104380971 - NM_004894 C14orf2 1 0.37 3.31 66 8.85 88.27 31 6.48 Yes 18 1.41 Yes 30 0.91 Yes -30 0.86 Yes 40 92.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 104380971 - NM_004894 C14orf2 1 0.03 0.21 11 8.85 88.27 31 6.48 Yes 18 1.41 Yes 30 0.91 Yes -30 0.86 Yes 40 92.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 104384462 - NM_004894 C14orf2 1 0.04 0.28 14 3.37 81.53 18 7.42 Yes 62 1.25 Yes 24 0.52 Yes -24 0.69 Yes 46 81.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 104384465 - NM_004894 C14orf2 1 0.02 0.14 8 2.73 68.47 15 7.23 Yes 59 1.26 Yes 24 0.52 Yes -21 0.7 Yes 49 81.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 104387420 - NM_004894 C14orf2 1 0.02 0.21 12 3.5 73.25 34 5.74 Yes 26 2.36 Yes 0 0 No -33 0.49 No 37 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104387546 - NM_004894 C14orf2 1 1.01 7.89 71 5.73 80.6 23 6.1 Yes 20 0.56 No 32 0.8 Yes -32 0.59 No 43 66.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 45372725 + NM_001017923 C14orf28 1 1.38 0.21 12 2.63 69.43 49 6.92 Yes 39 0.3 No 34 0.22 Yes -43 0.61 No 27 57.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 105958445 + NM_001134875 C14orf80 1 0.51 0.29 18 -2.87 82.54 25 5.57 Yes 12 0.45 No 21 0.74 Yes -24 0.85 Yes 46 83.72 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105958484 + NM_001134875 C14orf80 1 4.97 2.69 70 1.71 84.96 22 4.7 No 51 0.45 No 21 0.74 Yes -21 0.69 Yes 49 64.26 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 105962216 + NM_001134875 C14orf80 1 23.55 6.1 71 6.5 79.38 21 6.48 Yes 63 0.08 No 29 0.6 Yes -29 0.5 No 50 58.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 83677339 - NM_001160113 C15orf40 1 2.35 1.53 53 7.89 77.37 30 5.44 No 11 0.74 No 0 0 No -29 0.4 No 41 77.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 83677543 - NM_001160113 C15orf40 1 0.14 0.1 7 7.74 85.19 25 4.49 No 37 0.87 Yes 0 0 No -24 0.72 Yes 46 63.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 36939769 + NM_001290233 C15orf41 1 0.58 0.22 15 7.92 77.94 28 7.44 Yes 47 2.08 Yes 27 0.93 Yes -27 0.66 Yes 43 67.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 36950461 + NM_001290233 C15orf41 1 5.22 1.38 51 6.74 86.95 34 5.43 No 9 0.92 Yes 0 0 No -33 0.76 Yes 49 61.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 36960311 + NM_001290233 C15orf41 1 0.61 0.19 12 9.5 93.27 30 6.67 Yes 26 1.77 Yes 0 0 No -29 0.7 Yes 41 91.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 36986813 + NM_001290233 C15orf41 1 0.79 0.22 14 9.01 91.64 54 6.16 Yes 38 0.06 No 0 0 No -21 0.53 No 17 67.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 36986817 + NM_001290233 C15orf41 1 2 0.58 32 -7.37 0 58 6.33 Yes 42 0.06 No 0 0 No -54 0.43 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 37002038 + NM_001290233 C15orf41 1 0.44 0.17 9 5.51 70.49 30 4.73 No 73 1.1 Yes 29 0.79 Yes -29 0.78 Yes 41 79.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 37002062 + NM_001290233 C15orf41 1 0.41 0.13 7 1.08 0 9 3.87 No 10 1.37 Yes 0 0 No -26 0.64 No 41 42.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40849567 - NM_001080792 C15orf57 1 0.26 0.35 19 -5.12 0 26 5.61 Yes 26 0.95 Yes 0 0 No -25 0.61 No 45 70.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40849570 - NM_001080792 C15orf57 1 0.3 0.31 17 -0.11 80.16 23 5.34 No 23 0.97 Yes 0 0 No -22 0.8 Yes 48 74.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40849590 - NM_001080792 C15orf57 1 0.35 0.43 24 6.75 79.73 34 5.77 Yes 3 1 Yes 21 0.57 Yes -26 0.77 Yes 44 61.55 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 40854207 - NM_001080792 C15orf57 1 3.4 3.35 52 5.22 74.56 29 5.43 No 16 0.87 Yes 28 0.9 Yes -28 0.83 Yes 42 91.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40854406 - NM_001080792 C15orf57 1 0.25 0.21 14 5.21 76.54 33 6.46 Yes 20 0.81 Yes 32 0.74 Yes -32 0.59 No 38 67.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 40855222 - NM_001080792 C15orf57 1 0.97 1.93 55 2.37 0 27 5.28 No 14 0.96 Yes 21 0.94 Yes -26 0.91 Yes 44 91.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40857072 - NM_001080792 C15orf57 1 0.24 0.36 9 5.18 86.72 16 6.08 Yes 3 1.06 Yes 0 0 No -34 0.53 No 36 47.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 22075658 + NM_001164579 C16orf52 1 0.73 0.18 11 8.01 85.74 35 6.39 Yes 22 1.09 Yes 20 0.53 Yes -34 0.6 No 36 40.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 22084888 + NM_001164579 C16orf52 1 1.26 0.31 18 9.67 88.85 26 5.57 Yes 13 1.04 Yes 0 0 No -25 0.87 Yes 45 95.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31503573 - NM_022744 C16orf58 1 0.13 0.17 10 5.63 83.21 19 6.61 Yes 6 0.29 No 0 0 No -18 0.59 No 52 51.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31505103 - NM_022744 C16orf58 1 0.52 0.67 34 -0.25 0 14 3.87 No 1 1.79 Yes 24 0.87 Yes -30 0.77 Yes 40 81.22 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 31505131 - NM_022744 C16orf58 1 0.58 0.74 29 5.25 83.05 24 5.48 No 73 1.71 Yes 24 0.87 Yes -23 0.83 Yes 47 71.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 19580565 + NM_020314 C16orf62 1 0.71 0.71 34 9.6 82.84 27 5.27 No 20 2.5 Yes 26 0.87 Yes -26 0.4 No 38 88.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 19580730 + NM_020314 C16orf62 1 0.18 0.18 9 7.95 90.83 9 5.1 No 65 -1.53 No 23 0.84 Yes -19 0.53 No 51 66.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 19584445 + NM_020314 C16orf62 1 1.73 1.64 52 3.62 0 31 5.78 Yes 18 0.73 No 25 0.87 Yes -30 0.61 No 40 76.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 19599548 + NM_020314 C16orf62 1 0.07 0.11 7 4.29 87.63 27 5.2 No 14 0.1 No 0 0 No -26 0.83 Yes 44 80.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 19623049 + NM_020314 C16orf62 1 1.77 1.6 48 9.82 87.66 26 5.13 No 62 -1.05 No 25 0.88 Yes -26 0.81 Yes 44 77.31 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 19642391 + NM_020314 C16orf62 1 0.27 0.29 15 -3.7 76.95 24 5.68 Yes 11 1.78 Yes 0 0 No -23 0.92 Yes 47 92.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 19651316 + NM_020314 C16orf62 1 0.34 0.29 16 4.91 78.55 22 6.8 Yes 9 1.27 Yes 26 0.58 Yes -22 0.46 No 48 48.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 19656156 + NM_020314 C16orf62 1 0.59 0.49 28 9.23 87.25 26 7.66 Yes 13 1.49 Yes 0 0 No -25 0.91 Yes 45 92.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 19660330 + NM_020314 C16orf62 1 0.29 0.32 15 5.35 81.49 28 6.43 Yes 15 1.17 Yes 0 0 No -27 0.66 No 43 79.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 19663676 + NM_020314 C16orf62 1 0.11 0.1 7 7.49 86.87 26 6.08 Yes 13 1.74 Yes 25 0.94 Yes -25 0.88 Yes 45 94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67155507 + NM_001320540 C16orf70 1 1.42 0.56 30 3.01 0 33 7.14 Yes 20 0.83 Yes 0 0 No -32 0.42 No 38 54.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67158900 + NM_001320540 C16orf70 1 0.25 0.1 7 4.05 73.71 32 6.16 Yes 64 -2.05 No 0 0 No -31 0.64 No 41 72.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 67166781 + NM_001320540 C16orf70 1 0.52 0.24 11 11.26 90.8 25 3.93 No 35 1.31 Yes 0 0 No -24 0.89 Yes 46 85.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67168530 + NM_001320540 C16orf70 1 3.48 1.13 49 6.64 91.75 26 6.5 Yes 13 0.68 No 25 0.89 Yes -25 0.63 No 45 80.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 67177540 + NM_001320540 C16orf70 1 0.37 0.18 11 3.79 81 20 4.65 No 18 0.75 No 0 0 No -23 0.83 Yes 47 85.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 9194781 + NM_014117 C16orf72 1 0.32 0.9 38 11.91 94.56 27 5.73 Yes 48 0.28 No 0 0 No -26 0.87 Yes 44 90.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 9202227 + NM_014117 C16orf72 1 0.35 0.49 27 8.39 86.3 41 8.84 Yes 28 0.9 Yes 0 0 No -25 0.82 Yes 45 86.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 46838321 - NM_001001436 C16orf87 1 0.09 0.11 8 7.47 88.31 17 5.03 No 47 0.51 No 0 0 No -32 0.87 Yes 38 82.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 46838321 - NM_001001436 C16orf87 1 0.19 0.29 16 7.47 88.31 17 5.03 No 47 0.51 No 0 0 No -32 0.87 Yes 38 82.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 46838359 - NM_001001436 C16orf87 1 1.05 1.39 48 5.09 89.72 22 5.2 No -4 0.9 Yes 0 0 No -21 0.7 Yes 49 81.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 46838359 - NM_001001436 C16orf87 1 1.26 1.69 53 5.09 89.72 22 5.2 No -4 0.9 Yes 0 0 No -21 0.7 Yes 49 81.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 46839740 - NM_001001436 C16orf87 1 0.45 0.63 34 5.23 80.67 27 5.11 No 4 0.18 No 0 0 No -26 0.65 No 44 46.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 46842047 - NM_001001436 C16orf87 1 0.34 0.47 24 6.57 82.03 26 5.91 Yes 70 0.97 Yes 25 0.67 Yes -25 0.51 No 37 70.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 46850131 - NM_001001436 C16orf87 1 0.11 0.14 10 8.35 81.67 31 5.92 Yes 18 1.3 Yes 0 0 No -30 0.56 No 42 66.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 87342861 - NM_001256917 C16orf95 1 5.69 0.68 34 6.48 76.2 58 7.86 Yes 63 0.02 No 0 0 No -24 0.62 No 46 80.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 87343940 - NM_001256917 C16orf95 1 0.94 0.11 7 11.45 85.74 29 6.4 Yes 16 2.2 Yes 28 0.97 Yes -28 0.87 Yes 42 92.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 87344903 - NM_001256917 C16orf95 1 21.73 2.86 60 6.91 76.97 29 7.62 Yes 16 1.46 Yes 0 0 No -28 0.83 Yes 42 84.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42219954 + NM_024032 C17orf53 1 1.2 0.18 10 7.77 71.7 47 8.17 Yes 34 1.63 Yes 0 0 No -46 0.59 No 24 84.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 42220045 + NM_024032 C17orf53 1 1.73 0.21 14 2.91 80.5 23 6.54 Yes -1 0.13 No 0 0 No -22 0.9 Yes 48 91.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42224829 + NM_024032 C17orf53 1 0.5 0.13 8 3.01 0 60 9.27 Yes 47 1.84 Yes 0 0 No -59 0.93 Yes 11 82.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42225494 + NM_024032 C17orf53 1 0.59 0.18 11 6.86 87.06 21 5.2 No 43 1.6 Yes 0 0 No -20 0.83 Yes 50 82.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42228331 + NM_024032 C17orf53 1 24.36 4.46 72 8.49 83.8 40 5.5 No 27 1.82 Yes 0 0 No -28 0.84 Yes 31 78.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42232116 + NM_024032 C17orf53 1 5.66 1.47 55 12.71 88.36 18 5.43 No 5 0.97 Yes 0 0 No -27 0.86 Yes 43 83.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30662369 - NM_022344 C17orf75 1 2.4 1.72 55 11.65 97.46 28 5.03 No 57 -3.25 No 0 0 No -23 0.42 No 48 42.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 30664981 - NM_022344 C17orf75 1 0.45 0.24 14 4.79 78.7 42 5.49 No 68 0.86 Yes 33 0.79 Yes -28 0.88 Yes 42 80.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 30664982 - NM_022344 C17orf75 1 0.3 0.13 8 -0.33 0 41 5.44 No 67 0.86 Yes 33 0.79 Yes -27 0.86 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 30666944 - NM_022344 C17orf75 1 2.97 1.42 53 5.67 84.98 18 4.78 No 29 0.27 No 27 0.69 Yes -24 0.64 No 46 53.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 71241306 + NM_017941 C17orf80 1 4.5 2.03 49 6.88 77.85 25 7.07 Yes 12 0.81 Yes 0 0 No -24 0.94 Yes 46 97.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 33553554 + NM_001201475 C18orf21 1 2.37 1.44 48 11.38 89.17 20 6.35 Yes 7 2.4 Yes 27 0.88 Yes -27 0.82 Yes 43 89.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 33554902 + NM_001201475 C18orf21 1 4.58 2.61 63 7.6 82.21 27 5.66 Yes 61 0.56 No 0 0 No -25 0.36 No 44 64.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 33557398 + NM_001201475 C18orf21 1 0.27 0.39 22 0.81 60.18 24 5.57 Yes 36 1.34 Yes 0 0 No -23 0.47 No 47 45.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 43804883 + NM_145055 C18orf25 1 4.94 0.24 12 3.58 65.19 23 5.62 Yes 10 1.14 Yes 0 0 No -23 0.52 No 47 49.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 47013154 - NM_001035005 C18orf32 1 1.61 0.49 25 7.23 74.1 37 8.53 Yes 24 1.57 Yes 0 0 No -36 0.54 No 34 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 51901585 + NR_110234 C18orf54 1 1.03 0.46 27 2.89 75.16 26 5.93 Yes 60 0.73 No 0 0 No -25 0.64 No 45 92.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 21087981 + NM_013326 C18orf8 1 0.45 0.53 28 4.48 75.63 24 6.17 Yes 59 1.4 Yes 0 0 No -24 0.62 No 47 60.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 21089568 + NM_013326 C18orf8 1 0.27 0.33 20 5.5 90.92 28 5.29 No 57 1.77 Yes 27 0.84 Yes -57 0.48 No 16 48.06 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 21091005 + NM_013326 C18orf8 1 0.14 0.18 9 6.06 80.08 31 4.79 No 76 0.76 No 0 0 No -23 0.47 No 47 45.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 21095793 + NM_013326 C18orf8 1 0.18 0.17 8 4.24 79.42 24 5.48 No 56 1.55 Yes 29 0.28 Yes -23 0.46 No 47 64.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 21097158 + NM_013326 C18orf8 1 1.52 1.64 61 4.64 87.81 24 5.1 No 11 0.74 No 0 0 No -23 0.71 Yes 47 78.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 21101364 + NM_013326 C18orf8 1 0.18 0.19 13 5.21 77.39 26 5.05 No 40 1.92 Yes 0 0 No -25 0.46 No 45 59.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 21101418 + NM_013326 C18orf8 1 0.34 0.33 19 5.34 74.77 42 7.52 Yes 29 1.58 Yes 0 0 No -31 0.68 Yes 39 74.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 21101681 + NM_013326 C18orf8 1 0.09 0.1 7 10.4 89.24 40 6.6 Yes 27 0.54 No 0 0 No -39 0.59 No 31 68.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 21107677 + NM_013326 C18orf8 1 0.15 0.18 11 -2.15 0 16 6.11 Yes 3 0.68 No 0 0 No -36 0.7 Yes 34 66.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 21107689 + NM_013326 C18orf8 1 0.11 0.14 9 -0.72 0 20 4.51 No 15 0.95 Yes 0 0 No -19 0.63 No 51 57.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 21109601 + NM_013326 C18orf8 1 0.19 0.21 14 -6.4 77.72 27 5.72 Yes 14 0.33 No 0 0 No -27 0.49 No 43 47.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 21110030 + NM_013326 C18orf8 1 0.1 0.14 9 3.4 72.54 27 6.47 Yes 48 0.81 Yes 0 0 No -29 0.7 Yes 41 72.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 21110170 + NM_013326 C18orf8 1 1.05 1.39 48 2.56 74.66 23 8.08 Yes 10 1.51 Yes 25 0.9 Yes -22 0.85 Yes 48 75.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 21110363 + NM_013326 C18orf8 1 0.22 0.28 19 2.06 73.61 22 4.69 No 28 2.09 Yes 0 0 No -40 0.8 Yes 30 55.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 21110474 + NM_013326 C18orf8 1 6.86 9.08 72 2.81 60.74 28 7.87 Yes 15 0.58 No 27 0.66 Yes -27 0.54 No 45 43.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 21110536 + NM_013326 C18orf8 1 0.18 0.26 13 7.39 84.31 45 7.07 Yes 32 0.24 No 0 0 No -24 0.81 Yes 34 43.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 30203790 - NM_001282931 C19orf12 1 5.42 0.53 25 9.26 84.69 28 5.66 Yes 46 1.45 Yes 0 0 No -27 0.7 Yes 45 71.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 30204093 - NM_001282931 C19orf12 1 6.34 0.63 30 9.01 87.4 49 6.36 Yes 11 1.83 Yes 0 0 No -23 0.94 Yes 47 95.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 30204360 - NM_001282931 C19orf12 1 1.75 0.15 9 2.99 71.23 45 7.07 Yes 32 1.08 Yes 0 0 No -27 0.61 No 26 62.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1475239 - NM_152482 C19orf25 1 0.37 0.24 14 3.66 0 13 4.36 No 29 1.28 Yes 21 0.82 Yes -41 0.71 Yes 29 53.37 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 1475514 - NM_152482 C19orf25 1 3.01 1.99 62 5.33 80.64 27 6.16 Yes 14 1.14 Yes 26 0.93 Yes -26 0.9 Yes 44 94.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1478580 - NM_152482 C19orf25 1 1.22 0.76 35 4.17 89.59 19 4.8 No 6 -0.5 No 18 0.8 Yes -18 0.84 Yes 52 60.72 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 16623820 + NM_032207 C19orf44 1 1.94 0.11 7 0.55 78.54 22 7.41 Yes 9 1.56 Yes 25 0.91 Yes -21 0.89 Yes 49 78.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 16625323 + NM_032207 C19orf44 1 2.91 0.17 11 4.88 78.85 12 4.34 No -1 1.54 Yes 41 0.21 Yes -18 0.44 No 37 42.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 16628048 + NM_032207 C19orf44 1 1.87 0.15 11 -1.42 0 13 4.12 No 24 0.74 No 0 0 No -36 0.8 Yes 34 74.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 40832391 - NR_046202 C19orf47 1 9.33 4.13 67 7.31 84.27 27 6.32 Yes 14 1.85 Yes 0 0 No -26 0.79 Yes 44 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40838551 - NR_046202 C19orf47 1 2.71 1.75 54 4.93 84.41 41 7.2 Yes 28 1.88 Yes 31 0.78 Yes -31 0.66 No 39 76.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 40840812 - NR_046202 C19orf47 1 1.04 0.74 30 0.96 0 29 12.97 Yes 16 0.75 No 28 0.88 Yes -28 0.89 Yes 42 95.97 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 40853219 - NR_046202 C19orf47 1 5.36 1.72 59 6.75 88.58 28 5.81 Yes 60 1.22 Yes 0 0 No -27 0.88 Yes 43 78.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40853273 - NR_046202 C19orf47 1 0.73 0.24 14 6.44 85.22 19 7.07 Yes 6 1.26 Yes 0 0 No -18 0.77 Yes 52 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13886284 + NM_014047 C19orf53 1 0.23 0.65 27 5.44 80.12 28 7.55 Yes 15 1.37 Yes 27 0.93 Yes -27 0.92 Yes 43 94.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 13888872 + NM_014047 C19orf53 1 0.03 0.11 8 -1.26 0 10 4 No 18 1.91 Yes 0 0 No -30 0.89 Yes 40 89.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 41246914 - NM_198476 C19orf54 1 0.98 0.31 20 2.97 78.42 34 7.07 Yes 21 1.7 Yes 33 0.92 Yes -33 0.97 Yes 37 97.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 41246971 - NM_198476 C19orf54 1 0.85 0.26 17 4.42 78.35 31 5.83 Yes 18 1.2 Yes 30 0.85 Yes -30 0.91 Yes 40 91.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 41249887 - NM_198476 C19orf54 1 2.12 0.69 31 3.95 74.96 28 6.02 Yes 1 -0.9 No 22 0.6 Yes -25 0.74 Yes 45 56.31 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 41249887 - NM_198476 C19orf54 1 39.58 12.14 72 3.95 74.96 28 6.02 Yes 1 -0.9 No 22 0.6 Yes -25 0.74 Yes 45 56.31 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 18699808 + NM_001100418 C19orf60 1 0.38 0.25 15 -4.31 0 34 5.74 Yes 21 0.02 No 0 0 No -26 0.76 Yes 44 55.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 18700114 + NM_001100418 C19orf60 1 0.91 0.35 17 6.25 74.22 31 7.93 Yes 18 1.1 Yes 0 0 No -30 0.98 Yes 40 96.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18700270 + NM_001100418 C19orf60 1 2.29 0.89 36 1.98 68.22 24 5.29 No 38 -3.56 No 20 0.9 Yes -23 0.78 Yes 47 62.86 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 18700288 + NM_001100418 C19orf60 1 57.53 22.21 72 3.72 74.27 21 5.2 No 56 -4.7 No 20 0.9 Yes -20 0.87 Yes 50 82.99 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18701678 + NM_001100418 C19orf60 1 0.33 0.32 17 2 77.32 21 4.9 No 16 1.11 Yes 0 0 No -44 0.56 No 26 63.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18702898 + NM_001100418 C19orf60 1 0.9 0.94 40 6.34 80.07 29 6.18 Yes 16 1.21 Yes 24 0.9 Yes -28 0.76 Yes 42 88.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10198151 + NM_001308277 C19orf66 1 0.15 0.24 13 6.85 84.94 51 6.14 Yes 21 1.39 Yes 0 0 No -33 0.8 Yes 37 84.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10199786 + NM_001308277 C19orf66 1 4.14 5.79 71 7.59 82.92 16 5.06 No 29 1.04 Yes 22 0.66 Yes -22 0.64 No 48 70.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 10200577 + NM_001308277 C19orf66 1 0.21 0.36 22 1.02 0 44 7.46 Yes 31 1.62 Yes 22 0.6 Yes -28 0.8 Yes 42 73.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10200636 + NM_001308277 C19orf66 1 0.56 0.96 44 5.15 79.21 37 6.16 Yes 75 0.91 Yes 0 0 No -26 0.63 No 34 60.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10202135 + NM_001308277 C19orf66 1 10.23 0.86 35 3.95 76.31 25 5.57 Yes 65 1.65 Yes 20 0.95 Yes -24 0.59 No 46 69.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 10202151 + NM_001308277 C19orf66 1 615.22 47.31 72 8.08 83.85 21 5 No 8 1.27 Yes 20 0.95 Yes -20 0.93 Yes 50 90.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10202164 + NM_001308277 C19orf66 1 7.24 0.56 24 0.52 62.12 16 4.69 No 21 1.25 Yes 0 0 No -33 0.91 Yes 37 85.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10202282 + NM_001308277 C19orf66 1 8.8 0.68 38 3.19 80.2 13 5.64 Yes 0 1.68 Yes 0 0 No -25 0.64 No 52 47.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10202383 + NM_001308277 C19orf66 1 0.16 0.18 11 4.37 73.12 22 5.01 No 62 0.15 No 0 0 No -22 0.56 No 48 67.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10202402 + NM_001308277 C19orf66 1 0.16 0.17 12 8.48 87.18 22 5.28 No 9 1.15 Yes 0 0 No -21 0.65 No 49 87.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 48677949 + NM_199341 C19orf68 1 3.19 0.5 28 6.07 76.2 41 8.24 Yes 2 1.15 Yes 0 0 No -26 0.81 Yes 44 73.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48682610 + NM_199341 C19orf68 1 0.9 0.18 12 7.79 85.67 31 8.12 Yes 18 1.91 Yes 0 0 No -30 0.81 Yes 40 86.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48690918 + NM_199341 C19orf68 1 4.02 0.18 11 2.44 67.45 167 7.45 Yes 70 -6.08 No 0 0 No -25 0.41 No 38 49.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 48693669 + NM_199341 C19orf68 1 2.63 0.21 13 6.35 76.4 32 5 No 24 0.81 Yes 0 0 No -31 0.91 Yes 39 95.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5678890 - NM_001308240 C19orf70 1 0.07 0.18 10 1.86 67.1 27 5.71 Yes 36 -3.08 No 0 0 No -26 0.62 No 45 61.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 5679242 - NM_001308240 C19orf70 1 1.05 2.19 63 5.78 76.34 16 6.91 Yes NA NA NA 32 0.47 Yes -19 0.34 No 24 62.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 68270181 - NM_001190265 C1D 1 0.08 0.24 15 -3.46 0 36 6.74 Yes 23 0.91 Yes 0 0 No -39 0.56 No 31 76.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 68274448 - NM_001190265 C1D 1 1.74 0.31 17 -0.22 0 31 3.94 No 71 1.24 Yes 21 0.7 Yes -25 0.74 Yes 45 71.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 68274448 - NM_001190265 C1D 1 9.85 1.25 46 -0.22 0 31 3.94 No 71 1.24 Yes 21 0.7 Yes -25 0.74 Yes 45 71.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 7223056 + NM_020156 C1GALT1 1 0.3 0.18 11 4.62 81.14 16 5.2 No 3 1.04 Yes 0 0 No -20 0.86 Yes 50 86.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 7224427 + NM_020156 C1GALT1 1 0.91 0.57 27 8.16 85.83 32 5.43 No 76 -4.68 No 0 0 No -26 0.55 No 39 40.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 7225014 + NM_020156 C1GALT1 1 0.38 0.25 14 8.85 85.19 31 4.56 No 2 0.13 No 0 0 No -24 0.65 No 46 70.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 7231047 + NM_020156 C1GALT1 1 0.36 0.24 12 7.68 74.6 27 4.76 No 28 0.58 No 0 0 No -30 0.44 No 45 57.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 7249057 + NM_020156 C1GALT1 1 0.57 0.38 20 9.89 87.09 49 4.66 No 36 1.16 Yes 30 0.69 Yes -30 0.61 No 30 53.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 7250076 + NM_020156 C1GALT1 1 0.36 0.22 12 8.84 88.85 32 6.56 Yes 33 0.18 No 36 0.21 Yes -36 0.35 No 34 50.13 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 7254672 + NM_020156 C1GALT1 1 7.23 4.32 68 5.62 81.29 34 6.92 Yes 21 1.06 Yes 0 0 No -33 0.78 Yes 37 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 7254750 + NM_020156 C1GALT1 1 1.75 1.13 44 5.26 73.48 28 5.29 No 56 -4.44 No 0 0 No -27 0.83 Yes 43 76.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 7254888 + NM_020156 C1GALT1 1 1 0.67 36 6.61 89.32 26 5.17 No 13 1.74 Yes 0 0 No -25 0.85 Yes 45 94.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 7274607 + NM_020156 C1GALT1 1 0.22 0.29 17 4.1 84.48 19 5.43 No 6 1.49 Yes 0 0 No -27 0.72 Yes 43 85.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 7275885 + NM_020156 C1GALT1 1 1.6 1.92 60 6.11 79.25 28 6.55 Yes 15 1.25 Yes 0 0 No -27 0.92 Yes 43 92.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 7277169 + NM_020156 C1GALT1 1 0.3 0.39 13 4.47 67.66 29 5.85 Yes 41 1.14 Yes 0 0 No -28 0.55 No 42 69.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 7283267 + NM_020156 C1GALT1 1 1.7 1.83 52 5.57 83.69 32 5.13 No 64 -1.58 No 0 0 No -31 0.85 Yes 39 85.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 200877243 + NM_001142569 C1orf106 1 0.32 0.14 8 4.99 96.2 14 5 No 1 0.4 No 19 0.49 Yes -26 0.56 No 51 51.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 200878354 + NM_001142569 C1orf106 1 1.63 0.64 30 2.05 85.78 27 7.07 Yes 14 2.46 Yes 0 0 No -26 0.79 Yes 44 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38149114 - NM_017850 C1orf109 1 14.62 4.64 71 4.19 88.78 20 4.8 No 51 1.32 Yes 19 0.75 Yes -19 0.42 No 30 42.67 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 169773220 + NM_018186 C1orf112 1 0.28 0.17 12 -0.7 0 44 7.35 Yes 15 0.86 Yes 30 0.61 Yes -43 0.59 No 27 63.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 169773252 + NM_018186 C1orf112 1 6.22 4.08 69 3.87 70.61 31 6.36 Yes 47 0.88 Yes 30 0.61 Yes -30 0.73 Yes 40 80.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 169777037 + NM_018186 C1orf112 1 0.29 0.26 12 8.09 89.18 36 6.4 Yes 23 0.34 No 0 0 No -30 0.41 No 38 52.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 169790540 + NM_018186 C1orf112 1 0.91 0.63 27 11.59 92.15 28 4.48 No 52 1.15 Yes 0 0 No -27 0.34 No 51 43.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169792605 + NM_018186 C1orf112 1 0.23 0.18 11 6.78 79.47 65 7.73 Yes 23 1.39 Yes 0 0 No -35 0.71 Yes 35 77.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 169795233 + NM_018186 C1orf112 1 1.14 0.83 37 4.7 83.57 27 6.9 Yes 14 0.33 No 26 0.55 Yes -26 0.34 No 38 50.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 169796195 + NM_018186 C1orf112 1 0.13 0.13 9 0.51 0 36 5.69 Yes 23 0.7 No 0 0 No -35 0.9 Yes 35 85.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 169798479 + NM_018186 C1orf112 1 3.12 1.25 46 9.55 94.53 27 6.47 Yes 14 1.02 Yes 0 0 No -26 0.43 No 44 57.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169799829 + NM_018186 C1orf112 1 0.19 0.15 7 1.6 0 24 5 No 32 0.49 No 30 0.52 Yes -23 0.35 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 169814771 + NM_018186 C1orf112 1 0.4 0.33 20 6.86 87.92 49 6.08 Yes 36 1.12 Yes 0 0 No -26 0.45 No 51 40.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169818645 + NM_018186 C1orf112 1 2.1 1 39 -0.62 0 26 4.92 No 10 0.17 No 0 0 No -26 0.53 No 44 39.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 169819578 + NM_018186 C1orf112 1 2.1 1.25 41 1.38 0 14 3.7 No 60 1.73 Yes 18 0.59 Yes -18 0.57 No 52 43.73 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 38274619 + NM_198446 C1orf122 1 0.11 0.13 7 2.48 82.67 22 4.8 No 9 1.12 Yes 26 0.94 Yes -21 0.85 Yes 49 90.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 231362239 - NM_152379 C1orf131 1 0.34 0.25 15 6.17 81.23 24 5.48 No 11 0.21 No 23 0.94 Yes -23 0.93 Yes 47 89.1 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 231364338 - NM_152379 C1orf131 1 0.16 0.17 11 3.03 0 28 6.78 Yes 15 1.33 Yes 0 0 No -31 0.84 Yes 39 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 231364953 - NM_152379 C1orf131 1 52.54 27.94 72 6.08 95.61 25 4.87 No 69 0.36 No 21 0.82 Yes -24 0.85 Yes 46 82.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1026990 - NM_001330306 C1orf159 1 4.71 0.58 31 4.08 75.86 38 10.45 Yes 25 1.55 Yes 26 0.86 Yes -37 0.71 Yes 33 85.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 3807603 - NM_207356 C1orf174 1 0.17 0.14 10 1.96 69.35 24 5.29 No 26 1.05 Yes 0 0 No -23 0.83 Yes 47 84.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 3808344 - NM_207356 C1orf174 1 0.89 0.76 23 6.7 74.58 17 5.67 Yes 4 1.42 Yes 0 0 No -31 0.74 Yes 39 63.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 3808381 - NM_207356 C1orf174 1 0.24 0.24 12 7.66 79.15 40 6.4 Yes 73 1.37 Yes 0 0 No -23 0.5 No 36 60.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 3812748 - NM_207356 C1orf174 1 0.3 0.19 11 -0.35 67.97 20 4.67 No 17 0.81 Yes 19 0.92 Yes -19 0.92 Yes 51 87.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 36182277 - NM_152374 C1orf216 1 0.99 0.22 15 3.75 82.21 23 5.1 No 53 -4.31 No 22 0.85 Yes -22 0.84 Yes 48 59.75 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 186352191 + NM_017847 C1orf27 1 2.68 1.88 58 7.07 76.19 31 5.27 No 52 1.38 Yes 0 0 No -30 0.84 Yes 40 93.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 186358714 + NM_017847 C1orf27 1 5.59 2.6 63 6.93 71.04 34 7.06 Yes 21 1.64 Yes 23 0.33 Yes -40 0.47 No 30 53.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 186367430 + NM_017847 C1orf27 1 2.08 1.67 54 -1.97 0 17 4.46 No 46 0.77 No 20 0.84 Yes -58 0.39 No 41 50.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 186380942 + NM_017847 C1orf27 1 13.91 6.44 71 6.44 85.51 33 7.21 Yes 20 0.51 No 32 0.83 Yes -32 0.95 Yes 38 93.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 186380947 + NM_017847 C1orf27 1 0.54 0.24 16 -1.74 0 38 7.45 Yes -3 1.04 Yes 0 0 No -37 0.94 Yes 33 93.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154185780 - NM_001297721 C1orf43 1 0.04 0.21 11 2.74 83.86 29 5.63 Yes 34 1.8 Yes 28 0.91 Yes -28 0.69 Yes 42 62.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 43239211 + NM_024097 C1orf50 1 1.28 0.5 30 10.41 83.34 31 5.66 Yes 67 -4.53 No 35 0.17 Yes -30 0.72 Yes 40 74.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 43239216 + NM_024097 C1orf50 1 1.15 0.44 24 -0.23 0 36 6.08 Yes 72 -4.52 No 35 0.17 Yes -35 0.69 Yes 35 79.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 43234658 + NM_024097 C1orf50 1 3.45 1.29 49 5.46 89.31 28 7.67 Yes 7 0.46 No 0 0 No -27 0.93 Yes 43 87.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43239211 + NM_024097 C1orf50 1 0.33 0.13 9 10.41 83.34 31 5.66 Yes 67 -4.53 No 35 0.17 Yes -30 0.72 Yes 40 74.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 43239216 + NM_024097 C1orf50 1 0.71 0.28 18 -0.23 0 36 6.08 Yes 72 -4.52 No 35 0.17 Yes -35 0.69 Yes 35 79.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 85724517 - NR_024113 C1orf52 1 1.06 0.21 14 5.15 78.14 30 4.97 No 17 0.29 No 0 0 No -29 0.84 Yes 41 69.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 151022056 + NM_017860 C1orf56 1 3.59 0.25 14 1.95 0 27 5.19 No 14 1.74 Yes 26 0.91 Yes -26 0.84 Yes 44 93.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 209956967 - NM_152485 C1orf74 1 0.6 0.14 8 6.89 75.47 29 5.07 No 1 0.76 No 0 0 No -28 0.85 Yes 42 79.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5336760 - NM_001212 C1QBP 1 0.02 0.31 19 -3.34 0 17 4.36 No 39 0.14 No 26 0.78 Yes -29 0.65 No 19 53.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 5337719 - NM_001212 C1QBP 1 0.01 0.11 7 8.28 82.52 33 6.72 Yes 20 0.71 No 0 0 No -33 0.46 No 43 54.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 5338257 - NM_001212 C1QBP 1 0.01 0.14 7 3.1 65.22 27 6.2 Yes 68 0.73 No 0 0 No -26 0.72 Yes 44 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5338285 - NM_001212 C1QBP 1 0.02 0.31 17 -14.08 0 53 9.32 Yes 53 1.1 Yes 0 0 No -47 0.46 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5338286 - NM_001212 C1QBP 1 0.04 0.42 24 -6.78 0 52 9.27 Yes 52 1.1 Yes 0 0 No -46 0.48 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5339358 - NM_001212 C1QBP 1 0.48 5.89 60 9.92 94.29 36 7.42 Yes 23 0.72 No 0 0 No -35 0.94 Yes 35 95.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 33997624 - NR_037951 C1QTNF3-AMACR 1 0.3 0.15 9 5.2 82.04 20 5.1 No 7 0.86 Yes 0 0 No -27 0.67 Yes 43 75.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7249702 - NM_001297642 C1RL 1 0.93 0.13 8 7.21 87.26 23 4.67 No 76 2.37 Yes 0 0 No -22 0.77 Yes 48 64.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 7251009 - NM_001297642 C1RL 1 6.08 0.76 29 1.61 84.35 24 6.09 Yes 8 0.87 Yes 23 0.5 Yes -24 0.33 No 50 39.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 7252096 - NM_001297642 C1RL 1 2.29 0.29 17 8.53 92.11 10 5.29 No -3 0.1 No 0 0 No -21 0.83 Yes 49 69.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 7263818 + NR_026947 C1RL-AS1 1 17.33 1.42 50 3.12 57.11 28 7.09 Yes 56 0.65 No 0 0 No -33 0.7 Yes 37 75.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 7263963 + NR_026947 C1RL-AS1 1 3.08 0.29 16 -0.23 82.52 12 4.8 No 61 0.13 No 21 0.33 Yes -23 0.26 No 52 40.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 7263966 + NR_026947 C1RL-AS1 1 19.05 1.56 56 3.93 81.87 15 5.1 No 64 0.14 No 21 0.33 Yes -21 0.28 No 49 42.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 7270862 + NR_026947 C1RL-AS1 1 1.31 0.13 8 4.71 0 19 4.47 No 67 0.67 No 0 0 No -18 0.68 Yes 52 87.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 7270862 + NR_026947 C1RL-AS1 1 1.97 0.18 11 4.71 0 19 4.47 No 67 0.67 No 0 0 No -18 0.68 Yes 52 87.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 7270862 + NR_026947 C1RL-AS1 1 25.07 2.31 61 4.71 0 19 4.47 No 67 0.67 No 0 0 No -18 0.68 Yes 52 87.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 7271497 + NR_026947 C1RL-AS1 1 1.27 0.14 9 -2.35 67.84 31 5.08 No 53 -3.23 No 0 0 No -30 0.9 Yes 40 94.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 7273075 + NR_026947 C1RL-AS1 1 68.86 5.82 72 5.43 72.78 56 6.63 Yes 43 0.4 No 28 0.69 Yes -41 0.76 Yes 31 84.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 5737357 + NM_152504 C20orf196 1 2.61 1.11 48 4.74 84.41 41 7.44 Yes 28 0.87 Yes 40 0.63 Yes -40 0.89 Yes 30 84.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 5745739 + NM_152504 C20orf196 1 0.23 0.11 7 8.47 94.48 27 4.03 No 1 0.39 No 30 0.57 Yes -26 0.74 Yes 44 78.46 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 5751370 + NM_152504 C20orf196 1 1.12 0.47 22 2.45 83.02 26 5.1 No 63 0.51 No 0 0 No -25 0.57 No 51 60.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5753780 + NM_152504 C20orf196 1 7.06 2.04 57 7.48 82.15 31 5.92 Yes 18 0.73 No 0 0 No -30 0.87 Yes 40 94.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5769288 + NM_152504 C20orf196 1 0.7 0.21 13 10.3 94.25 26 6.24 Yes 13 1.05 Yes 0 0 No -25 0.71 Yes 45 62.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 5798130 + NM_152504 C20orf196 1 10.45 2.96 63 4.73 83.52 102 10.61 Yes NA NA NA 0 0 No -70 0.06 No 21 2.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 35240394 + NR_026562 C20orf24 1 0.08 0.39 23 0.45 68.34 13 4.68 No 46 0.78 Yes 0 0 No -58 0.86 Yes 12 46.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 35239419 + NR_026562 C20orf24 1 0.44 2.08 53 7.21 96.76 29 6.43 Yes 72 1.11 Yes 0 0 No -28 0.9 Yes 42 92.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35240394 + NR_026562 C20orf24 1 1.65 8.69 72 0.45 68.34 13 4.68 No 46 0.78 Yes 0 0 No -58 0.86 Yes 12 46.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 35240510 + NR_026562 C20orf24 1 0.02 0.1 7 2.97 85.46 21 5.02 No 45 0.45 No 0 0 No -26 0.33 No 44 54.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 3735933 - NM_001258430 C20orf27 1 0.25 0.19 10 7.83 79.54 33 5.65 Yes 50 -1.01 No 0 0 No -25 0.6 No 45 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 3740095 - NM_001258430 C20orf27 1 0.17 0.15 9 -2.57 0 14 4.47 No 1 0.97 Yes 0 0 No -19 0.92 Yes 51 82.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45750803 - NM_001271440 C21orf2 1 118.91 14.56 72 7.13 85.09 30 6.44 Yes 17 2.05 Yes 23 0.96 Yes -23 0.85 Yes 47 82.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45753137 - NM_001271440 C21orf2 1 3.33 0.74 32 0.64 0 13 3.56 No 18 0.15 No 21 0.95 Yes -30 0.85 Yes 40 94.04 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45756804 - NM_001271440 C21orf2 1 2.05 0.5 24 5.46 82.76 18 7 Yes 5 1.22 Yes 28 0.33 Yes -28 0.33 No 53 78.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 45756941 - NM_001271440 C21orf2 1 0.82 0.18 10 4.72 90.11 27 5.2 No 61 0.1 No 0 0 No -26 0.49 No 16 79.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 45554730 + NM_004649 C21orf33 1 0.08 0.15 9 4.83 76.62 29 5.74 Yes 63 1.39 Yes 0 0 No -28 0.91 Yes 42 92.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45556775 + NM_004649 C21orf33 1 0.07 0.15 10 6.43 81.05 27 5.1 No 59 1.32 Yes 0 0 No -21 0.68 Yes 49 71.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45559734 + NM_004649 C21orf33 1 0.13 0.24 13 4.77 80.91 21 5 No 52 -2.64 No 0 0 No -20 0.5 No 47 47.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45560823 + NM_004649 C21orf33 1 4.03 6.57 71 7.02 86.89 23 4.39 No 18 0.59 No 26 0.81 Yes -23 0.61 No 47 46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 45560894 + NM_004649 C21orf33 1 0.24 0.38 18 6.85 83.89 59 7.44 Yes 54 1.1 Yes 0 0 No -22 0.77 Yes 48 74.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45561045 + NM_004649 C21orf33 1 3.76 6.19 72 9.28 78.15 37 6.55 Yes 39 -1.34 No 29 0.85 Yes -29 0.71 Yes 41 81.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45561080 + NM_004649 C21orf33 1 0.19 0.33 17 6.17 83.79 30 5.53 No 17 0.27 No 0 0 No -29 0.86 Yes 41 89.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47721628 - NM_058180 C21orf58 1 2.09 0.25 16 8.84 85.83 23 5.39 No 48 -2.27 No 22 0.58 Yes -24 0.54 No 48 73.62 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr21 47731407 - NM_058180 C21orf58 1 0.99 0.1 7 7.14 90.43 25 4.9 No 12 0.59 No 0 0 No -24 0.96 Yes 46 86.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47736882 - NM_058180 C21orf58 1 3.42 0.67 33 10.8 88.1 19 5.84 Yes 6 0.52 No 0 0 No -18 0.61 No 52 77.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 47737180 - NM_058180 C21orf58 1 8.22 0.43 26 1.51 71.31 24 6.77 Yes 11 0.71 No 0 0 No -23 0.59 No 47 87.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 47737263 - NM_058180 C21orf58 1 123.54 8.9 71 6.9 90.5 23 6.76 Yes 10 1.85 Yes 22 0.93 Yes -22 0.7 Yes 48 77.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 47737719 - NM_058180 C21orf58 1 1.52 0.11 8 10.7 88.58 23 6.88 Yes 10 1.41 Yes 0 0 No -22 0.65 No 48 54.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 33975151 - NM_021254 C21orf59 1 0.28 0.42 23 5.27 83.09 50 7.19 Yes 13 0.18 No 0 0 No -26 0.42 No 45 46.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 33975599 - NM_021254 C21orf59 1 0.15 0.25 15 -0.29 0 19 4.88 No 53 0.59 No 0 0 No -29 0.79 Yes 41 59.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 33981911 - NM_021254 C21orf59 1 0.13 0.19 11 4.75 85.02 17 4.9 No 4 1.24 Yes 0 0 No -20 0.71 Yes 50 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33982265 - NM_021254 C21orf59 1 2.75 2.92 68 3.86 70.6 39 5.54 No 64 0.9 Yes 25 0.42 Yes -25 0.48 No 40 51.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 19169810 - NM_001100421 C21orf91 1 0.06 0.13 9 5.62 72.66 35 6.39 Yes 22 0.18 No 0 0 No -34 0.74 Yes 48 52.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 19169860 - NM_001100421 C21orf91 1 0.4 0.86 39 9.82 82.4 30 4.19 No 68 1.53 Yes 0 0 No -25 0.41 No 45 59.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 19183789 - NM_001100421 C21orf91 1 0.42 0.9 43 -0.38 62.98 48 7.18 Yes 35 0.84 Yes 30 0.75 Yes -47 0.45 No 23 64.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 19186247 - NM_001100421 C21orf91 1 0.06 0.14 10 2.57 74.46 28 4.67 No 53 0.6 No 27 0.55 Yes -27 0.79 Yes 43 73.08 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 43319457 - NM_199050 C2CD2 1 4.14 0.76 33 4.6 85.97 20 4.9 No 7 1.65 Yes 23 0.79 Yes -19 0.76 Yes 51 84.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 43340498 - NM_199050 C2CD2 1 4.33 0.68 33 9.62 85.12 25 5.48 No 59 1.28 Yes 0 0 No -24 0.86 Yes 46 87.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118979893 + NM_001290474 C2CD2L 1 0.63 0.1 7 5 74.86 33 6.13 Yes 71 1.03 Yes 0 0 No -32 0.76 Yes 46 64.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 118984346 + NM_001290474 C2CD2L 1 1.9 0.31 16 6.83 74.46 32 5.3 No 33 2.44 Yes 31 0.54 Yes -31 0.57 No 21 67.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 118984346 + NM_001290474 C2CD2L 1 7.67 1.18 46 6.83 74.46 32 5.3 No 33 2.44 Yes 31 0.54 Yes -31 0.57 No 21 67.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 118984561 + NM_001290474 C2CD2L 1 30.49 4.46 71 5.68 73.63 22 4.24 No 5 0.56 No 26 0.75 Yes -26 0.61 No 53 45.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 73723819 - NM_001286577 C2CD3 1 0.48 0.13 8 4.58 89.45 32 8.83 Yes 19 2.04 Yes 0 0 No -31 0.86 Yes 39 95.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73727847 - NM_001286577 C2CD3 1 0.59 0.15 9 10.71 92.06 22 6.63 Yes 9 1.57 Yes 21 0.88 Yes -21 0.77 Yes 49 87.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 73738005 - NM_001286577 C2CD3 1 1.89 0.47 27 6.16 88.76 27 5.28 No 14 1.16 Yes 0 0 No -26 0.65 No 44 65.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 73739439 - NM_001286577 C2CD3 1 0.43 0.13 8 -0.8 0 19 6.51 Yes 72 -2.47 No 0 0 No -19 0.61 No 52 66.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 73745654 - NM_001286577 C2CD3 1 0.57 0.17 11 6.92 81.1 35 4.48 No 7 0.76 No 19 0.69 Yes -34 0.36 No 51 50.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 73748669 - NM_001286577 C2CD3 1 0.74 0.24 14 5.42 83.09 24 5.1 No 11 1.22 Yes 23 0.96 Yes -23 0.96 Yes 47 97.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 73753261 - NM_001286577 C2CD3 1 2.36 0.85 40 -1.19 75.38 41 8.26 Yes 39 1.15 Yes 37 0.67 Yes -40 0.62 No 30 87.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 73780958 - NM_001286577 C2CD3 1 1.01 0.32 19 13.79 89.01 29 7.32 Yes 16 0.74 No 0 0 No -28 0.61 No 42 67.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 73798607 - NM_001286577 C2CD3 1 0.41 0.15 10 4.64 84.41 18 5.92 Yes 43 1.36 Yes 0 0 No -31 0.58 No 47 51.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 73814243 - NM_001286577 C2CD3 1 0.52 0.17 11 3.2 78 37 6.83 Yes 24 0.27 No 0 0 No -22 0.47 No 48 44.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 73817535 - NM_001286577 C2CD3 1 1.94 0.58 29 3.37 0 35 7.31 Yes 17 1.23 Yes 0 0 No -29 0.36 No 36 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 73819189 - NM_001286577 C2CD3 1 2.07 0.64 30 8.24 92.41 44 7.6 Yes 31 1.41 Yes 43 0.59 Yes -43 0.67 Yes 27 65.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 73823139 - NM_001286577 C2CD3 1 4.81 1.47 48 7.9 76.43 55 5.6 Yes 64 1.05 Yes 0 0 No -33 0.58 No 37 53.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 73840591 - NM_001286577 C2CD3 1 0.29 0.13 8 8.2 76.03 35 6.16 Yes 59 -0.4 No 0 0 No -21 0.68 Yes 36 78.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73840771 - NM_001286577 C2CD3 1 1.77 0.71 32 3.82 80.01 32 6.85 Yes 61 -2.13 No 0 0 No -31 0.77 Yes 39 75.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73840838 - NM_001286577 C2CD3 1 2.74 1.04 42 4.44 82.27 24 4.8 No 57 1.02 Yes 0 0 No -22 0.88 Yes 48 48.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 73840888 - NM_001286577 C2CD3 1 0.57 0.24 15 -3.99 0 20 4.47 No 75 1.82 Yes 19 0.94 Yes -19 0.91 Yes 51 87.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 73841018 - NM_001286577 C2CD3 1 0.33 0.14 9 3.68 84.22 34 8 Yes 3 1.6 Yes 28 0.66 Yes -33 0.8 Yes 37 89.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 73850778 - NM_001286577 C2CD3 1 0.65 0.29 15 7.26 90.82 33 5.58 Yes 20 0.91 Yes 0 0 No -27 0.77 Yes 43 64.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 73867848 - NM_001286577 C2CD3 1 0.65 0.28 16 5.64 80.64 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.88 Yes 50 92.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73869740 - NM_001286577 C2CD3 1 2.81 1.28 47 8.09 93.6 28 5.28 No 49 1.23 Yes 0 0 No -27 0.62 No 43 31.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 73875391 - NM_001286577 C2CD3 1 0.96 0.39 12 10.2 92.36 44 5.7 Yes 31 1.59 Yes 0 0 No -35 0.68 Yes 35 92.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73876108 - NM_001286577 C2CD3 1 0.56 0.18 11 -0.96 0 65 6.61 Yes 52 0.77 No 0 0 No -43 0.85 Yes 27 89.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73879140 - NM_001286577 C2CD3 1 0.32 0.1 7 8.81 83.73 29 5.39 No 22 0.97 Yes 0 0 No -28 0.72 Yes 42 61.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 22622236 - NM_001286174 C2CD5 1 1.87 0.25 15 7.97 95.65 24 5.29 No 66 0.57 No 0 0 No -26 0.49 No 47 43.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 22627823 - NM_001286174 C2CD5 1 0.21 0.21 12 -10.34 80.11 30 4.97 No 4 0.02 No 0 0 No -34 0.44 No 36 61.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 22631402 - NM_001286174 C2CD5 1 0.22 0.24 12 3.07 0 16 4.36 No 24 1.2 Yes 0 0 No -36 0.87 Yes 34 91.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 22637280 - NM_001286174 C2CD5 1 0.49 0.38 21 9.51 84.5 23 5.83 Yes 10 1.52 Yes 0 0 No -22 0.82 Yes 48 83.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 22650562 - NM_001286174 C2CD5 1 0.26 0.32 19 7.68 89 17 5.85 Yes 53 1.44 Yes 0 0 No -25 0.57 No 45 56.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 22672174 - NM_001286174 C2CD5 1 3.3 3.33 66 5.85 78.46 94 8.52 Yes 66 0.1 No 23 0.34 Yes -45 0.58 No 15 73.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 22676141 - NM_001286174 C2CD5 1 0.12 0.11 7 8.41 93.04 52 10.12 Yes 39 1.29 Yes 0 0 No -26 0.69 Yes 44 67.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 22677537 - NM_001286174 C2CD5 1 1 0.58 28 3.47 62.39 30 5.82 Yes 27 0.51 No 0 0 No -29 0.81 Yes 41 87.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 22680791 - NM_001286174 C2CD5 1 0.33 0.38 20 3.02 78.43 20 4.78 No 45 -4.93 No 0 0 No -19 0.94 Yes 51 96.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 22680839 - NM_001286174 C2CD5 1 0.14 0.17 8 7.18 83.69 16 4.69 No 61 0.32 No 20 0.57 Yes -18 0.54 No 52 82.61 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 70380001 - NM_017880 C2orf42 1 0.99 0.53 25 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -27 0.41 No 54 67.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 70386343 - NM_017880 C2orf42 1 0.49 0.28 10 7.2 85.61 32 9.25 Yes 19 1.29 Yes 0 0 No -31 0.85 Yes 39 92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 70388365 - NM_017880 C2orf42 1 0.35 0.15 8 4.86 73.35 33 5.48 No 52 1.31 Yes 0 0 No -32 0.88 Yes 38 81.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 70393634 - NM_017880 C2orf42 1 0.56 0.18 11 8.95 85.86 27 6.16 Yes 14 1.49 Yes 0 0 No -26 0.91 Yes 44 95.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 105956042 + NM_001286537 C2orf49 1 0.92 0.5 26 -0.13 74.66 45 5.77 Yes 74 1.27 Yes 0 0 No -30 0.7 Yes 40 46.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 105958001 + NM_001286537 C2orf49 1 0.35 0.36 20 7.31 77.15 21 6.66 Yes 8 0.78 Yes 0 0 No -21 0.54 No 42 72.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 105958053 + NM_001286537 C2orf49 1 0.16 0.18 11 7.3 78.16 25 5.57 Yes 12 1.14 Yes 0 0 No -24 0.91 Yes 46 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 105958057 + NM_001286537 C2orf49 1 0.2 0.21 13 0.27 0 29 5.92 Yes 16 1.12 Yes 0 0 No -28 0.89 Yes 42 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 105959577 + NM_001286537 C2orf49 1 2.83 0.63 35 3.25 68.98 26 5.38 No 71 1.42 Yes 0 0 No -25 0.71 Yes 45 48.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 105961227 + NM_001286537 C2orf49 1 0.32 0.31 19 9 87.44 26 6.08 Yes 13 1.33 Yes 0 0 No -25 0.87 Yes 45 94.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85838697 - NM_001013649 C2orf68 1 3.61 2.21 62 6.28 82.76 17 5.65 Yes -3 0.19 No 29 0.54 Yes -29 0.54 No 43 69.4 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 200783105 + NM_153689 C2orf69 1 0.53 0.38 24 6.11 86.78 62 8.31 Yes 15 0.41 No 0 0 No -27 0.71 Yes 43 76.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 200788553 + NM_153689 C2orf69 1 0.32 0.25 14 6.07 82.37 23 6.77 Yes 58 1.4 Yes 0 0 No -22 0.68 Yes 48 79.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 120064405 - NM_001017927 C2orf76 1 0.35 0.29 19 8.48 83.71 29 6.32 Yes 16 0.56 No 0 0 No -28 0.93 Yes 42 86.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 120069061 - NM_001017927 C2orf76 1 1.09 0.88 38 3.52 73.48 56 6.97 Yes -3 1.01 Yes 0 0 No -22 0.78 Yes 48 84.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 120093959 - NM_001017927 C2orf76 1 0.16 0.13 8 0.18 0 36 9.49 Yes 23 1.03 Yes 0 0 No -35 0.45 No 35 52.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 88200030 + NM_173824 C3orf38 1 0.09 0.13 8 3.56 74.6 15 5.27 No 51 1.01 Yes 0 0 No -22 0.53 No 43 55.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 88200066 + NM_173824 C3orf38 1 0.3 0.39 20 2.68 80.85 26 5.32 No 76 -2.97 No 0 0 No -25 0.81 Yes 45 76.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 88200091 + NM_173824 C3orf38 1 0.41 0.56 25 3.03 77.65 28 4.16 No 15 0.01 No 0 0 No -28 0.81 Yes 42 89.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 88205173 + NM_173824 C3orf38 1 15.93 15.06 71 7.28 84.24 47 6.24 Yes 34 0.26 No 0 0 No -34 0.58 No 36 64.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 88205276 + NM_173824 C3orf38 1 0.69 0.63 35 7.38 81.06 22 4.65 No 60 0.37 No 21 0.76 Yes -21 0.77 Yes 49 86.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 113096962 + NM_152400 C4orf32 1 0.43 0.31 16 4.64 89.23 20 5.83 Yes 72 -4.28 No 0 0 No -25 0.31 No 48 19.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 113101829 + NM_152400 C4orf32 1 2.57 1.78 49 5.88 84.71 32 6.28 Yes 19 0.1 No 0 0 No -31 0.52 No 39 53.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 130021353 + NM_001099783 C4orf33 1 0.7 0.15 8 11.65 93.11 35 6.36 Yes 22 1.93 Yes 0 0 No -34 0.76 Yes 36 76.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 130021821 + NM_001099783 C4orf33 1 1.2 0.28 16 5.02 82.65 28 5.41 No 19 0.33 No 27 0.77 Yes -27 0.83 Yes 43 74.91 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 130023758 + NM_001099783 C4orf33 1 1.29 0.43 18 1.28 83.32 19 5.43 No 6 0.84 Yes 0 0 No -32 0.59 No 38 66.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 130031145 + NM_001099783 C4orf33 1 1.37 0.69 38 8.6 80.83 27 4.64 No 14 0.11 No 0 0 No -26 0.78 Yes 44 75.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 130031285 + NM_001099783 C4orf33 1 2.08 0.99 40 5.62 77.7 32 4.44 No 60 1.11 Yes 0 0 No -31 0.64 No 45 52.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 130031546 + NM_001099783 C4orf33 1 0.72 0.39 18 8.95 76.83 31 4.67 No 18 0.36 No 0 0 No -30 0.77 Yes 40 91.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 159590917 - NM_001008393 C4orf46 1 0.14 0.13 7 1.29 0 20 6.21 Yes 7 1.14 Yes 22 0.33 Yes -37 0.34 No 44 43.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 133293047 - NM_020199 C5orf15 1 0.14 0.19 10 4.19 0 35 6.08 Yes 37 -1.4 No 0 0 No -35 0.57 No 40 78.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 133295597 - NM_020199 C5orf15 1 0.09 0.15 11 5.5 75.57 73 9.2 Yes 60 0.94 Yes 0 0 No -28 0.29 No 43 39.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 133303151 - NM_020199 C5orf15 1 0.25 0.42 23 7.62 98.05 23 4.96 No 25 0.63 No 22 0.89 Yes -22 0.89 Yes 48 87.44 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 31535065 + NM_018356 C5orf22 1 0.95 0.76 36 7.7 83.76 26 5.41 No 13 0.68 No 25 0.9 Yes -25 0.61 No 45 80.23 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 31538587 + NM_018356 C5orf22 1 6.38 4.83 71 5.98 86.99 19 7.13 Yes 6 1.6 Yes 18 0.86 Yes -18 0.77 Yes 52 80.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 31538590 + NM_018356 C5orf22 1 4.52 3.32 68 2.79 81.43 22 7.33 Yes 9 1.59 Yes 18 0.86 Yes -21 0.82 Yes 49 80.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 31548596 + NM_018356 C5orf22 1 4.06 4.04 70 4.19 83.63 23 4.63 No 1 0.95 Yes 22 0.81 Yes -22 0.81 Yes 48 77.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 134182352 + NM_001135586 C5orf24 1 0.31 0.14 9 0.93 0 15 4.36 No 2 0.54 No 29 0.4 Yes -14 0.59 No 56 63.55 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 43492100 - NM_198566 C5orf34 1 1.91 0.43 22 3.01 0 37 4.99 No 32 0.46 No 0 0 No -31 0.8 Yes 39 92.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 43510154 - NM_198566 C5orf34 1 3.39 0.32 20 4.7 82.65 26 4.51 No -1 0.19 No 0 0 No -21 0.82 Yes 49 96.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 37125491 - NM_023073 C5orf42 1 1.5 0.28 11 2.35 84.6 24 3.46 No 34 0.85 Yes 0 0 No -23 0.77 Yes 47 55.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 37157523 - NM_023073 C5orf42 1 31.06 4.08 69 8.03 84.16 34 5.13 No -3 0.43 No 25 0.58 Yes -25 0.4 No 37 51.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 37167228 - NM_023073 C5orf42 1 0.27 0.11 7 2.51 75.47 23 6.08 Yes 10 1.22 Yes 0 0 No -22 0.9 Yes 48 95.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37179543 - NM_023073 C5orf42 1 17.02 2.11 59 -1.74 72.41 37 6.2 Yes 24 0.8 Yes 33 0.66 Yes -36 0.61 No 34 56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 37180283 - NM_023073 C5orf42 1 18.97 2.29 61 5.46 85.32 29 5.48 No 47 0.79 Yes 25 0.89 Yes -28 0.7 Yes 42 84.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 37190638 - NM_023073 C5orf42 1 0.89 0.17 9 7.92 83.82 27 7.62 Yes 14 0.31 No 0 0 No -26 0.74 Yes 44 84.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 37197019 - NM_023073 C5orf42 1 0.98 0.13 8 2.54 0 42 7.27 Yes 73 1.05 Yes 0 0 No -41 0.66 No 29 72.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 37203573 - NM_023073 C5orf42 1 5.13 0.86 37 2.85 81.77 22 5.01 No 69 0.47 No 0 0 No -21 0.92 Yes 49 88.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 37206399 - NM_023073 C5orf42 1 5.41 0.71 35 3.25 78.22 43 5.11 No 14 0.28 No 26 0.55 Yes -23 0.43 No 47 63.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 37214159 - NM_023073 C5orf42 1 3.44 0.4 17 8.82 79.84 35 7.91 Yes 22 1.1 Yes 0 0 No -37 0.54 No 38 47.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 37224695 - NM_023073 C5orf42 1 0.74 0.14 10 10.06 90.93 25 5.36 No 33 0.17 No 0 0 No -24 0.54 No 46 83.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 37226504 - NM_023073 C5orf42 1 2.68 0.67 32 7.7 87.76 23 5.7 Yes 10 0.54 No 0 0 No -22 0.95 Yes 48 96.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 37227384 - NM_023073 C5orf42 1 1.12 0.28 18 7.94 85.62 39 5.88 Yes 19 0.07 No 0 0 No -21 0.86 Yes 49 79.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 37230821 - NM_023073 C5orf42 1 5.77 1.33 47 7.97 84.45 23 4.41 No 35 0.87 Yes 0 0 No -22 0.8 Yes 48 74.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37231018 - NM_023073 C5orf42 1 1.89 0.18 9 6.34 78.91 29 6.84 Yes 16 0.77 Yes 0 0 No -28 0.7 Yes 42 93.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37244586 - NM_023073 C5orf42 1 1.2 0.28 16 4.3 77.47 24 5.36 No 53 0.13 No 0 0 No -23 0.75 Yes 47 73.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 41904677 + NM_175921 C5orf51 1 0.47 0.4 22 8.27 87.18 26 5.66 Yes 13 0.79 Yes 0 0 No -25 0.91 Yes 45 91.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 41905459 + NM_175921 C5orf51 1 1.43 1.18 49 9.01 87.64 33 5.7 Yes 45 0.34 No 0 0 No -32 0.95 Yes 38 87.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 41908410 + NM_175921 C5orf51 1 3 3.65 65 6.59 85.07 37 7.08 Yes 24 1.67 Yes 36 0.77 Yes -36 0.79 Yes 34 89.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 41913514 + NM_175921 C5orf51 1 1.15 0.81 37 5.76 72.31 30 5.29 No 74 -4.29 No 0 0 No -31 0.46 No 41 52.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 41913546 + NM_175921 C5orf51 1 0.25 0.17 9 4.24 71.54 27 5.08 No 30 -3.2 No 0 0 No -21 0.32 No 44 40.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 41916407 + NM_175921 C5orf51 1 3.07 2.21 62 7.92 92.09 25 5 No 16 0.78 Yes 0 0 No -24 0.96 Yes 46 96.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131758517 + NR_045116 C5orf56 1 0.47 0.21 12 6.84 84.67 30 7.28 Yes 17 0.47 No 0 0 No -29 0.88 Yes 41 92.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131791450 + NR_045116 C5orf56 1 0.74 0.18 10 9.63 85.63 29 6.32 Yes 70 1.2 Yes 0 0 No -28 0.73 Yes 37 69.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131792703 + NR_045116 C5orf56 1 8.17 2.03 60 8.67 88.91 18 4.53 No 74 1.01 Yes 25 0.81 Yes -25 0.73 Yes 45 59.54 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 131793484 + NR_045116 C5orf56 1 1.71 0.39 23 -0.45 0 16 4.36 No 67 1.02 Yes 0 0 No -20 0.66 No 50 52.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131796253 + NR_045116 C5orf56 1 3.08 0.76 37 8.99 86.09 25 6.13 Yes 63 1.65 Yes 24 0.56 Yes -24 0.72 Yes 46 56.92 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 131800379 + NR_045116 C5orf56 1 1.76 0.39 22 4.22 78.07 16 5.62 Yes 3 0.62 No 0 0 No -21 0.72 Yes 49 65.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131800446 + NR_045116 C5orf56 1 1.54 0.33 20 6 84.74 36 7.86 Yes 70 0.64 No 0 0 No -35 0.58 No 35 85.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131805731 + NR_045116 C5orf56 1 4.05 1 38 5.28 75.2 32 4.38 No 69 0.61 No 0 0 No -31 0.48 No 51 56.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 126383213 - NM_001164479 C5orf63 1 5.56 0.82 38 7.13 86.85 22 4.51 No 14 0.74 No 0 0 No -21 0.81 Yes 49 83.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 126383365 - NM_001164479 C5orf63 1 1 0.18 12 6.35 81.4 30 5.82 Yes 12 1.18 Yes 0 0 No -24 0.63 No 41 56.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 126387177 - NM_001164479 C5orf63 1 1.78 0.38 15 6.36 81.23 24 6.14 Yes 11 0.1 No 23 0.88 Yes -23 0.93 Yes 47 89.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 126387640 - NM_001164479 C5orf63 1 33.28 5.35 69 10.28 86.84 19 5 No 20 0.05 No 24 0.47 Yes -18 0.63 No 52 71.26 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 126392199 - NM_001164479 C5orf63 1 40.95 8.03 72 4.36 77.68 27 4.77 No 54 0.49 No 26 0.94 Yes -26 0.96 Yes 44 95.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 34214888 - NM_001008704 C6orf1 1 0.63 0.22 13 7.31 79.88 20 6.93 Yes 49 1.07 Yes 0 0 No -22 0.62 No 48 64.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 34563726 - NM_024294 C6orf106 1 0.66 2.39 63 8.87 80.85 31 6.63 Yes 18 1.49 Yes 0 0 No -30 0.53 No 40 74.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 34573947 - NM_024294 C6orf106 1 0.04 0.13 7 7.1 84.73 63 9.04 Yes 0 1.3 Yes 0 0 No -34 0.89 Yes 36 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34617608 - NM_024294 C6orf106 1 3.47 8.92 72 7.09 86.23 41 7.2 Yes 10 0.3 No 0 0 No -22 0.74 Yes 48 74.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 107361584 + NM_001142470 C6orf203 1 12.86 6.97 71 8.07 84.7 28 6.24 Yes 15 0.97 Yes 27 0.88 Yes -27 0.8 Yes 43 90.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 43968753 + NM_001171992 C6orf223 1 163.91 19.21 72 4 86.59 12 3.96 No 25 -1.41 No 23 0.64 Yes -21 0.75 Yes 49 76.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 43968756 + NM_001171992 C6orf223 1 15.28 1.92 48 -0.49 77.5 9 5.2 No 28 -1.4 No 0 0 No -24 0.73 Yes 46 60.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 43970204 + NM_001171992 C6orf223 1 0.24 0.15 10 5.12 80.53 31 6.6 Yes 9 0.58 No 0 0 No -21 0.76 Yes 49 83.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43970331 + NM_001171992 C6orf223 1 0.83 0.53 14 8.71 73.88 26 6.08 Yes 13 1.95 Yes 0 0 No -25 0.78 Yes 45 93.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 24709018 - NM_030939 C6orf62 1 0.05 0.42 23 8.72 87 29 5.29 No 16 1.56 Yes 0 0 No -28 0.9 Yes 42 95.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 24709170 - NM_030939 C6orf62 1 0.01 0.13 8 1.64 75.68 13 5 No 0 0.86 Yes 26 0.72 Yes -18 0.44 No 52 47.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 24710818 - NM_030939 C6orf62 1 1.82 13.86 72 9.86 84.08 30 8.37 Yes 17 1.39 Yes 0 0 No -29 0.96 Yes 41 97.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 24711225 - NM_030939 C6orf62 1 0.19 1.47 53 3.55 83.78 32 6.16 Yes 51 1.07 Yes 0 0 No -31 0.73 Yes 39 77.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 24712441 - NM_030939 C6orf62 1 0.04 0.35 21 8.2 87.64 22 5.55 No 9 1.14 Yes 0 0 No -21 0.82 Yes 49 94.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 24712733 - NM_030939 C6orf62 1 0.02 0.14 10 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -16 0.43 No 54 69.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 24712912 - NM_030939 C6orf62 1 0.01 0.13 7 3.01 0 31 6.08 Yes 49 1.55 Yes 0 0 No -30 0.85 Yes 40 91.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 24714583 - NM_030939 C6orf62 1 0.02 0.13 7 11.64 85.3 29 5.97 Yes 16 0.1 No 0 0 No -28 0.8 Yes 42 71.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 24716550 - NM_030939 C6orf62 1 1.59 11.46 72 2.95 82.08 28 7.48 Yes 15 0.8 Yes 0 0 No -27 0.83 Yes 43 87.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36865877 + NM_001286635 C6orf89 1 0.5 0.17 10 8.34 86.88 29 6.37 Yes 45 0.96 Yes 0 0 No -28 0.5 No 42 64.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36865877 + NM_001286635 C6orf89 1 0.66 0.21 14 8.34 86.88 29 6.37 Yes 45 0.96 Yes 0 0 No -28 0.5 No 42 64.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36866572 + NM_001286635 C6orf89 1 0.48 0.14 9 5.8 76.27 35 7.18 Yes 3 0.48 No 0 0 No -32 0.28 No 31 25.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36867708 + NM_001286635 C6orf89 1 0.09 0.1 7 6.74 83.55 16 4.76 No 3 1.55 Yes 0 0 No -27 0.49 No 43 36.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36870055 + NM_001286635 C6orf89 1 3.48 4.24 72 6.41 81.31 30 6.04 Yes 17 1.68 Yes 29 0.93 Yes -29 0.94 Yes 41 95.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 36887388 + NM_001286635 C6orf89 1 0.54 0.75 33 5.38 83.91 20 5.91 Yes 7 2.14 Yes 0 0 No -19 0.47 No 51 64.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6633300 + NM_001303039 C7orf26 1 0.16 0.17 10 3.97 84.41 37 6.56 Yes 24 0.1 No 0 0 No -36 0.8 Yes 34 81.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6633334 + NM_001303039 C7orf26 1 0.14 0.11 8 -2.44 0 37 6.56 Yes 2 0.34 No 0 0 No -36 0.52 No 34 32.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6633375 + NM_001303039 C7orf26 1 0.29 0.28 16 4.12 79.2 23 4.88 No 10 1.02 Yes 0 0 No -22 0.97 Yes 48 93.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6633466 + NM_001303039 C7orf26 1 0.39 0.38 19 7.69 86.16 21 7.21 Yes 8 1.3 Yes 0 0 No -20 0.84 Yes 50 83.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6639237 + NM_001303039 C7orf26 1 0.14 0.11 7 8.43 89.6 21 4.78 No 76 -4.08 No 0 0 No -19 0.75 Yes 51 79.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6640947 + NM_001303039 C7orf26 1 1.18 0.67 29 5.01 88.31 33 5.94 Yes 20 0.78 Yes 0 0 No -28 0.8 Yes 42 84.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6642294 + NM_001303039 C7orf26 1 1.19 0.47 24 7.25 86.86 22 7.19 Yes 53 1.45 Yes 21 0.78 Yes -21 0.32 No 38 38.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 6647167 + NM_001303039 C7orf26 1 9.41 4.18 70 6.29 85.39 15 6.32 Yes -4 0.16 No 23 0.66 Yes -23 0.58 No 47 58.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 6647779 + NM_001303039 C7orf26 1 0.95 0.39 21 9.29 92.85 15 12.35 Yes 2 1.68 Yes 0 0 No -26 0.94 Yes 44 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 25179725 - NM_138811 C7orf31 1 0.95 0.21 10 4.19 78.44 36 4.64 No 71 0.76 No 0 0 No -35 0.45 No 52 45.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99752805 - NM_018275 C7orf43 1 1.64 0.58 32 -2.64 0 15 4.24 No 2 0.86 Yes 21 0.72 Yes -14 0.91 Yes 56 75.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 99753070 - NM_018275 C7orf43 1 0.36 0.19 14 -8.34 0 12 4.24 No 15 2.38 Yes 18 0.84 Yes -27 0.7 Yes 43 78.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 99753543 - NM_018275 C7orf43 1 0.63 0.22 13 5.45 0 15 4.58 No 12 0.92 Yes 22 0.74 Yes -24 0.63 No 46 89.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 99753555 - NM_018275 C7orf43 1 4.89 1.58 54 0.06 73.68 13 4.9 No 0 0.95 Yes 22 0.74 Yes -22 0.38 No 48 38.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 99754620 - NM_018275 C7orf43 1 3.22 1.5 53 -1.92 75.58 23 5.83 Yes 30 0.07 No 25 0.46 Yes -22 0.69 Yes 48 70.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 134853620 - NM_001243754 C7orf49 1 2.32 0.54 29 5.56 74.82 31 5.66 Yes 69 2.17 Yes 0 0 No -30 0.87 Yes 40 77.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 1040065 - NM_001318252 C7orf50 1 0.12 0.22 13 -5.91 64.04 13 4.07 No 40 -2.79 No 0 0 No -46 0.38 No 24 26.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 1044451 - NM_001318252 C7orf50 1 0.08 0.21 13 6.79 80.06 24 6.71 Yes 11 2.29 Yes 0 0 No -23 0.95 Yes 47 95.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 1047294 - NM_001318252 C7orf50 1 0.11 0.25 14 5.27 85.44 20 4.69 No 14 -0.42 No 0 0 No -20 0.65 No 55 48.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 146278685 + NM_023080 C8orf33 1 0.61 0.78 38 -1.8 74.84 29 5.66 Yes 16 0.93 Yes 0 0 No -28 0.93 Yes 42 90.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 67738230 + NM_001204173 C8orf44-SGK3 1 4.5 0.36 21 2.98 83.95 30 8.06 Yes 17 0.98 Yes 0 0 No -29 0.49 No 41 66.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 86130356 - NR_120681 C8orf59 1 0.24 0.13 7 2.72 72.99 43 7.82 Yes 30 0.89 Yes 0 0 No -42 0.28 No 32 52.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 86131054 - NR_120681 C8orf59 1 0.84 0.33 22 -0.12 0 53 6.75 Yes 25 0.58 No 0 0 No -23 0.43 No 39 56.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 86131590 - NR_120681 C8orf59 1 13.96 13.21 72 3.96 88.28 36 9.31 Yes 23 1.11 Yes 32 0.78 Yes -35 0.61 No 35 68.08 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 124233307 - NM_032847 C8orf76 1 0.24 0.28 14 5.88 81.84 42 6.53 Yes 51 0.28 No 0 0 No -29 0.77 Yes 41 57.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 124238385 - NM_032847 C8orf76 1 0.16 0.18 10 5.64 76.19 29 6.4 Yes 35 0.82 Yes 0 0 No -37 0.54 No 36 70.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 124238598 - NM_032847 C8orf76 1 1.62 1.76 57 5.29 83.47 43 6.93 Yes 70 1.14 Yes 0 0 No -42 0.71 Yes 28 60.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 124238637 - NM_032847 C8orf76 1 0.71 0.79 39 2.82 78.39 29 5.19 No 31 1.1 Yes 0 0 No -29 0.57 No 59 25.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 124238659 - NM_032847 C8orf76 1 5.84 6.44 72 1.67 87.09 22 5.1 No 9 1.11 Yes 21 0.91 Yes -21 0.88 Yes 49 81.15 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 124238662 - NM_032847 C8orf76 1 0.84 0.9 39 -0.64 79.76 19 4.8 No 6 1.11 Yes 21 0.91 Yes -18 0.78 Yes 52 80.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145753575 - NM_001001795 C8orf82 1 0.37 0.21 12 4.94 72.05 30 5.12 No 17 0.86 Yes 0 0 No -29 0.67 Yes 34 66.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 91972372 - NM_001190972 C8orf88 1 0.32 0.18 11 5.65 76.81 26 6.99 Yes 68 0.51 No 0 0 No -22 0.28 No 48 31.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 91974425 - NM_001190972 C8orf88 1 0.25 0.13 8 3.93 72.56 51 8.2 Yes 61 0.46 No 0 0 No -28 0.91 Yes 42 83.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 91990173 - NM_001190972 C8orf88 1 0.3 0.19 11 4.16 83.32 59 7.81 Yes 46 1.47 Yes 0 0 No -47 0.68 Yes 23 90.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139887480 + NR_138077 C9orf142 1 2.15 0.43 25 -3.64 0 21 2.63 No 56 0.23 No 26 0.57 Yes -20 0.32 No 60 20.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 139887509 + NR_138077 C9orf142 1 0.88 0.13 7 4.17 0 34 6.16 Yes 73 -3.33 No 0 0 No -31 0.56 No 39 66.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139887544 + NR_138077 C9orf142 1 6.22 1.19 43 8.62 91.04 30 5.37 No -3 1.17 Yes 0 0 No -26 0.68 Yes 41 64.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 139887572 + NR_138077 C9orf142 1 1.04 0.21 12 5.9 85.3 11 5.2 No -2 1.44 Yes 0 0 No -20 0.46 No 50 35.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139887800 + NR_138077 C9orf142 1 0.91 0.32 19 1.07 0 9 3.87 No 62 0.84 Yes 18 0.76 Yes -36 0.85 Yes 34 80.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 139888221 + NR_138077 C9orf142 1 3.5 2.01 58 -0.95 0 25 5.92 Yes 12 1.47 Yes 0 0 No -24 0.86 Yes 46 92.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130924282 + NM_024112 C9orf16 1 1.24 1.64 54 10.45 90.53 31 9.13 Yes 18 1.25 Yes 30 0.92 Yes -30 0.89 Yes 40 95.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 97495413 + NM_001193331 C9orf3 1 2.37 0.24 15 3.28 0 42 8.09 Yes 29 1.22 Yes 0 0 No -41 0.85 Yes 29 87.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 97552176 + NM_001193331 C9orf3 1 2.22 0.19 13 10.23 88.27 24 5.99 Yes 11 0.76 No 0 0 No -23 0.95 Yes 47 94.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 86560152 - NM_032307 C9orf64 1 0.28 0.17 9 8.47 88.27 18 5.39 No 71 1.2 Yes 0 0 No -22 0.61 No 53 82.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 86560309 - NM_032307 C9orf64 1 0.72 0.35 19 4.19 0 39 4.69 No 45 0.86 Yes 0 0 No -30 0.54 No 40 66.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 86567223 - NM_032307 C9orf64 1 0.25 0.17 11 5 82.67 26 5.24 No 63 1.32 Yes 0 0 No -25 0.97 Yes 45 97.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86568759 - NM_032307 C9orf64 1 0.28 0.17 10 8.52 87.99 44 7.07 Yes 39 -1.15 No 27 0.42 Yes -33 0.66 No 37 74.66 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 86570457 - NM_032307 C9orf64 1 0.47 0.25 14 2.19 73.1 28 5.48 No 15 1.55 Yes 0 0 No -27 0.94 Yes 43 95.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86570460 - NM_032307 C9orf64 1 0.37 0.17 11 2.96 76.47 25 5.2 No 12 1.57 Yes 0 0 No -24 0.95 Yes 46 95.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 132596608 - NM_016520 C9orf78 1 0.24 0.26 14 10.96 95.65 20 5.02 No 7 1.41 Yes 0 0 No -29 0.62 No 44 53.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 74533340 + NM_182505 C9orf85 1 2 1.03 38 2.35 74.01 31 5.01 No 18 1.71 Yes 30 0.9 Yes -30 0.74 Yes 40 91.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 74556720 + NM_182505 C9orf85 1 0.86 0.42 17 10.88 87.34 26 4.62 No 19 0.82 Yes 25 0.79 Yes -25 0.76 Yes 45 53.89 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 74564377 + NM_182505 C9orf85 1 1.86 0.67 33 7.72 89.6 25 4.89 No 17 0.95 Yes 0 0 No -24 0.87 Yes 46 90.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 74566957 + NM_182505 C9orf85 1 1.73 0.6 31 5.1 76.17 25 5.28 No 12 0.06 No 0 0 No -25 0.8 Yes 45 68.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 74566960 + NM_182505 C9orf85 1 0.9 0.31 16 6.01 83.78 28 5.54 No 15 0.06 No 0 0 No -28 0.77 Yes 42 67.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 15772082 + NM_007220 CA5B 1 2.58 0.13 7 9.19 92.26 22 8.38 Yes -1 0.45 No 0 0 No -32 0.26 No 53 18.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 15709260 + NR_026551 CA5BP1 1 1.88 0.83 39 5.37 83.95 22 5.83 Yes 71 0.7 No 0 0 No -21 0.83 Yes 49 78.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 15715362 + NR_026551 CA5BP1 1 29.78 4.76 66 5.21 77.46 34 8.3 Yes 42 1.09 Yes 33 0.79 Yes -33 0.81 Yes 37 90.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 15720549 + NR_026551 CA5BP1 1 0.81 0.15 11 8.85 90.33 26 5.04 No 16 0.77 No 0 0 No -28 0.55 No 42 53.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 15715362 + NR_026551 CA5BP1 1 118.8 20.38 72 5.21 77.46 34 8.3 Yes 42 1.09 Yes 33 0.79 Yes -33 0.81 Yes 37 90.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 15720549 + NR_026551 CA5BP1 1 1.25 0.24 13 8.85 90.33 26 5.04 No 16 0.77 No 0 0 No -28 0.55 No 42 53.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 26861162 - NM_001167575 CAAP1 1 0.13 0.14 9 0.57 0 16 4.11 No 40 -3.75 No 28 0.63 Yes -30 0.43 No 39 38.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 26866779 - NM_001167575 CAAP1 1 0.11 0.14 7 7.08 91.48 23 5.2 No 10 0.15 No 0 0 No -22 0.76 Yes 48 79.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 26869976 - NM_001167575 CAAP1 1 3.66 3.82 71 5.95 87.06 37 7.14 Yes 24 0.93 Yes 0 0 No -36 0.61 No 34 76.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 26884901 - NM_001167575 CAAP1 1 0.51 0.54 27 4.54 74.07 17 3.55 No 15 0.84 Yes 19 0.62 Yes -27 0.5 No 34 56.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 231647210 + NM_001130849 CAB39 1 0.08 0.38 19 2.21 56.56 41 5.97 Yes 19 1.08 Yes 0 0 No -36 0.81 Yes 34 87.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231654497 + NM_001130849 CAB39 1 0.03 0.14 10 7.38 79.85 35 5.92 Yes 22 0.93 Yes 0 0 No -34 0.54 No 36 70.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 231664024 + NM_001130849 CAB39 1 0.07 0.36 19 2.49 65.73 43 4.76 No 19 -3.07 No 0 0 No -30 0.83 Yes 40 88.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231671184 + NM_001130849 CAB39 1 0.02 0.14 8 8.61 90.49 28 6.18 Yes 51 1.3 Yes 0 0 No -25 0.45 No 43 53.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 231675353 + NM_001130849 CAB39 1 0.14 0.43 23 9.59 86.32 32 6.74 Yes 19 2 Yes 0 0 No -31 0.76 Yes 39 83.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231678764 + NM_001130849 CAB39 1 0.05 0.17 9 -7.45 0 83 8.47 Yes 18 1.7 Yes 0 0 No -24 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 231683564 + NM_001130849 CAB39 1 0.02 0.15 9 10.72 92.15 34 5.94 Yes 36 1.59 Yes 0 0 No -22 0.9 Yes 48 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24408166 + NM_001201429 CABIN1 1 0.45 0.11 7 6.67 83.42 37 7.2 Yes 24 2.58 Yes 0 0 No -36 0.65 No 34 71.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 24408207 + NM_001201429 CABIN1 1 3.42 0.79 38 6.39 83.47 27 5.74 Yes 65 2.54 Yes 0 0 No -26 0.61 No 44 66.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 24414260 + NM_001201429 CABIN1 1 0.69 0.17 9 8.22 85.17 23 6.63 Yes 10 1.28 Yes 0 0 No -22 0.74 Yes 48 88.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24422147 + NM_001201429 CABIN1 1 0.92 0.19 11 3.54 0 39 6.63 Yes 70 0.69 No 0 0 No -39 0.89 Yes 31 89.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 24433356 + NM_001201429 CABIN1 1 1.16 1.1 41 11.8 86.46 26 5.22 No 55 0.88 Yes 0 0 No -25 0.52 No 45 59.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 24438588 + NM_001201429 CABIN1 1 1.15 0.54 28 3.67 80.12 21 5.66 Yes 8 1.65 Yes 0 0 No -20 0.76 Yes 50 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24445466 + NM_001201429 CABIN1 1 0.64 0.35 21 5.8 89.59 24 5.2 No 51 0.8 Yes 0 0 No -23 0.82 Yes 47 76.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24456391 + NM_001201429 CABIN1 1 0.39 0.32 15 -8.38 0 35 5.39 No 72 -2.35 No 0 0 No -34 0.92 Yes 36 93.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 24464412 + NM_001201429 CABIN1 1 0.55 0.22 15 10.42 85.74 31 4.92 No 18 0.49 No 0 0 No -30 0.93 Yes 40 95.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 24477702 + NM_001201429 CABIN1 1 0.18 0.1 7 6.18 74.98 54 8.1 Yes 41 1.71 Yes 0 0 No -53 0.93 Yes 17 96.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24484933 + NM_001201429 CABIN1 1 3.38 1.18 44 7.48 87.2 33 6.16 Yes 50 1.81 Yes 0 0 No -32 0.64 No 38 74.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 24561501 + NM_001201429 CABIN1 1 1.27 0.63 30 -8.92 0 26 5.2 No 13 1.61 Yes 0 0 No -25 0.63 No 45 79.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 24564399 + NM_001201429 CABIN1 1 4.24 2.11 62 6.59 81.09 32 6.63 Yes 19 1.46 Yes 23 0.91 Yes -31 0.82 Yes 39 88.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 24569044 + NM_001201429 CABIN1 1 0.47 0.29 17 10.03 88.59 15 4.83 No 53 -0.27 No 27 0.64 Yes -27 0.64 No 43 63.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 24569076 + NM_001201429 CABIN1 1 0.57 0.35 17 8.18 78.3 35 6.4 Yes 22 0.3 No 0 0 No -34 0.84 Yes 36 92.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 24569101 + NM_001201429 CABIN1 1 0.23 0.14 10 8.99 87.86 21 3.96 No 47 0.29 No 0 0 No -20 0.55 No 50 64.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 24571977 + NM_001201429 CABIN1 1 0.3 0.13 8 3.37 77.8 17 5.62 Yes 61 0.45 No 0 0 No -23 0.74 Yes 47 86.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 24572059 + NM_001201429 CABIN1 1 0.27 0.19 14 3.39 87.4 17 4.8 No 4 0.09 No 21 0.68 Yes -19 0.69 Yes 51 72.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 24573558 + NM_001201429 CABIN1 1 7.92 3.5 66 7.46 81.52 17 4.8 No 4 1.36 Yes 0 0 No -24 0.78 Yes 46 89.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24573750 + NM_001201429 CABIN1 1 0.49 0.24 14 7.94 77.21 35 6.64 Yes 22 1.13 Yes 0 0 No -34 0.42 No 45 47.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 24573996 + NM_001201429 CABIN1 1 0.3 0.18 12 3.46 75.54 17 4.18 No 64 -5.01 No 29 0.88 Yes -21 0.41 No 55 26.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 24574024 + NM_001201429 CABIN1 1 0.35 0.24 14 -0.77 0 34 6.08 Yes 21 1.3 Yes 0 0 No -33 0.91 Yes 37 88.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 20770268 + NM_138375 CABLES1 1 0.95 0.65 26 9.73 85.61 30 5.53 No 17 1.47 Yes 29 0.96 Yes -29 0.76 Yes 41 89.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 20772036 + NM_138375 CABLES1 1 0.48 0.24 12 6.21 79.65 21 4.99 No 45 0.51 No 0 0 No -20 0.66 No 50 72.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 20773176 + NM_138375 CABLES1 1 0.28 0.21 13 10.59 95.65 31 5.85 Yes 18 0.36 No 0 0 No -31 0.55 No 40 64.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 20776812 + NM_138375 CABLES1 1 0.2 0.21 12 3.06 70.47 27 6.02 Yes 14 -1.32 No 26 0.77 Yes -26 0.92 Yes 44 86.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 20815945 + NM_138375 CABLES1 1 0.16 0.19 11 8.95 85.4 19 5.25 No 49 -1.5 No 0 0 No -25 0.44 No 45 50.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 20835548 + NM_138375 CABLES1 1 3.07 2.4 56 4.19 0 32 7.12 Yes 19 1.48 Yes 0 0 No -31 0.65 No 39 86.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 136328528 + NM_001135775 CACFD1 1 7.91 0.49 25 7.35 85.22 25 4.74 No 18 0.51 No 0 0 No -21 0.52 No 49 57.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 181481801 + NM_001205294 CACNA1E 1 6.13 2.13 51 -3.46 59.88 38 7.33 Yes 68 0.49 No 0 0 No -37 0.3 No 33 75.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 181542977 + NM_001205294 CACNA1E 1 0.36 0.11 7 6.59 85.69 34 4.93 No 75 0.66 No 0 0 No -23 0.7 Yes 47 65.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 181549277 + NM_001205294 CACNA1E 1 2.32 0.64 31 6.77 79.32 26 6.94 Yes 47 0.13 No 0 0 No -25 0.65 No 38 76.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 181615207 + NM_001205294 CACNA1E 1 1.43 0.49 23 10.07 86.49 29 7.83 Yes 16 1.62 Yes 0 0 No -28 0.98 Yes 42 97.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37350051 - NM_000723 CACNB1 1 6.97 0.44 20 10.59 89.46 25 6.39 Yes 4 1.34 Yes 24 0.79 Yes -28 0.77 Yes 42 78.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 152698254 - NM_001330118 CACNB4 1 6.57 2.32 55 4.77 70.28 18 7.44 Yes 68 0.23 No 0 0 No -29 0.54 No 41 48.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 152726250 - NM_001330118 CACNB4 1 3.71 0.57 27 11.36 88.95 47 7.28 Yes 34 0.84 Yes 0 0 No -32 0.58 No 38 84.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 152732775 - NM_001330118 CACNB4 1 0.99 0.32 20 0.42 67.2 33 5.92 Yes 35 0.56 No 0 0 No -32 0.84 Yes 38 78.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3614493 - NM_001080543 CACTIN 1 0.64 0.28 13 2.82 0 21 4.51 No 63 0.15 No 24 0.59 Yes -20 0.78 Yes 50 46.42 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 3617276 - NM_001080543 CACTIN 1 0.51 0.22 13 10.95 94.18 34 8.16 Yes 21 0.62 No 0 0 No -33 0.9 Yes 37 93.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3617914 - NM_001080543 CACTIN 1 0.59 0.25 13 9.59 88.54 33 5.66 Yes 65 -3.51 No 0 0 No -25 0.68 Yes 45 55.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 3619375 - NM_001080543 CACTIN 1 0.16 0.1 7 12.18 91.67 36 10.35 Yes 32 2.33 Yes 0 0 No -35 0.64 No 35 77.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 3619545 - NM_001080543 CACTIN 1 1.08 0.5 27 8.05 81.77 27 5.72 Yes 46 1.77 Yes 0 0 No -26 0.95 Yes 44 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120445677 - NM_153810 CACUL1 1 0.34 0.28 16 2.65 0 35 6.13 Yes 4 1.66 Yes 0 0 No -34 0.9 Yes 36 92.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120445690 - NM_153810 CACUL1 1 0.51 0.39 17 -3.83 0 22 7.79 Yes 9 0.57 No 30 0.86 Yes -21 0.85 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 120445693 - NM_153810 CACUL1 1 0.25 0.18 11 1.84 0 19 7.6 Yes 6 0.56 No 30 0.86 Yes -18 0.76 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 120453262 - NM_153810 CACUL1 1 0.28 0.31 14 7.43 82.89 19 7.25 Yes 6 1.42 Yes 18 0.58 Yes -26 0.37 No 44 53.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 120453676 - NM_153810 CACUL1 1 0.11 0.1 7 3 73.34 22 4.8 No 9 0.53 No 0 0 No -21 0.9 Yes 49 94.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 174973755 + NM_014412 CACYBP 1 0.09 0.42 22 -2.28 0 13 3.86 No 17 1.67 Yes 0 0 No -29 0.58 No 41 79.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 174979062 + NM_014412 CACYBP 1 0.21 1.31 50 -3.17 0 61 6.68 Yes 48 0.01 No 0 0 No -31 0.66 No 39 71.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 27445064 + NM_004341 CAD 1 0.12 0.14 10 -14.95 68.94 31 4.27 No 11 0.63 No 0 0 No -23 0.84 Yes 47 88.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 27447580 + NM_004341 CAD 1 0.23 0.33 18 5.66 91.21 28 5.83 Yes 15 0.28 No 23 0.93 Yes -27 0.75 Yes 43 74.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27448219 + NM_004341 CAD 1 0.39 0.38 22 7.23 90.92 28 5.29 No 76 -0.38 No 0 0 No -27 0.64 No 16 73.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 27450264 + NM_004341 CAD 1 0.27 0.36 21 7.14 75.43 33 5.86 Yes 76 -4.35 No 0 0 No -32 0.72 Yes 45 62.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 27452326 + NM_004341 CAD 1 0.27 0.36 23 6.03 81.27 28 7.68 Yes 15 1.55 Yes 0 0 No -27 0.86 Yes 43 93.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27454890 + NM_004341 CAD 1 0.47 0.74 38 3.25 81.94 22 4.91 No 33 -2.68 No 0 0 No -21 0.47 No 49 49.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27455297 + NM_004341 CAD 1 0.77 0.83 35 8.69 77.83 23 5.59 Yes 52 1.12 Yes 20 0.74 Yes -22 0.41 No 36 64.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 27455320 + NM_004341 CAD 1 0.11 0.11 7 2.41 0 26 5.66 Yes 75 1.11 Yes 0 0 No -25 0.92 Yes 45 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27457283 + NM_004341 CAD 1 0.08 0.14 9 3.02 71.04 19 4.87 No 0 0.55 No 0 0 No -18 0.74 Yes 52 73.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 27459595 + NM_004341 CAD 1 0.25 0.33 21 5.68 75.19 16 5.27 No 3 0.59 No 21 0.42 Yes -28 0.66 No 42 38.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 27459914 + NM_004341 CAD 1 2.7 3.64 67 3.01 0 35 6.4 Yes 67 1.67 Yes 0 0 No -34 0.93 Yes 36 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27462963 + NM_004341 CAD 1 0.11 0.15 11 -4.21 43.92 34 5.87 Yes 21 0.62 No 33 0.58 Yes -33 0.26 No 37 30.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 27463434 + NM_004341 CAD 1 1.73 1.93 55 9.4 80.87 36 4.62 No 13 1.2 Yes 25 0.96 Yes -25 0.9 Yes 45 90.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54106631 - NM_020898 CALCOCO1 1 5.22 1.26 51 8.26 77.21 23 6.51 Yes 55 1.03 Yes 22 0.92 Yes -22 0.77 Yes 48 75.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54113796 - NM_020898 CALCOCO1 1 0.41 0.13 9 8.08 74.27 14 5.49 No 1 0.85 Yes 0 0 No -24 0.41 No 46 49.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 54117547 - NM_020898 CALCOCO1 1 1.96 0.5 29 3.17 76.24 26 5.08 No 42 -1.11 No 25 0.74 Yes -54 0.32 No 16 52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 54119048 - NM_020898 CALCOCO1 1 0.37 0.11 7 -4.82 83.31 20 4.33 No 67 -2.68 No 24 0.74 Yes -23 0.53 No 47 64.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 54119544 - NM_020898 CALCOCO1 1 4.71 1.21 47 6.27 86.33 23 4.86 No 3 0.83 Yes 22 0.83 Yes -22 0.81 Yes 42 53.02 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 46916737 + NM_001261391 CALCOCO2 1 0.23 0.21 13 9.2 91.96 41 9.64 Yes 28 0.99 Yes 35 0.23 Yes -35 0.55 No 30 74.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 46919135 + NM_001261391 CALCOCO2 1 1.2 1.11 46 10.32 91.57 18 6.4 Yes 5 0.39 No 20 0.39 Yes -34 0.61 No 50 67.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 46928902 + NM_001261391 CALCOCO2 1 0.08 0.13 9 3.75 75.6 15 4.72 No 16 0.96 Yes 24 0.95 Yes -18 0.48 No 52 54.4 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 46933940 + NM_001261391 CALCOCO2 1 0.06 0.13 8 5.28 75.64 38 5.07 No 25 0.11 No 37 0.73 Yes -37 0.88 Yes 33 92.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 188252193 - NM_005795 CALCRL 1 3.42 0.4 18 -0.63 54.94 21 4.98 No 44 0.48 No 20 0.84 Yes -20 0.81 Yes 14 71.48 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 105207793 - NM_015916 CALHM2 1 1.42 0.24 14 5.94 74.96 33 5.9 Yes 20 0.62 No 0 0 No -26 0.75 Yes 44 93.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 105209692 - NM_015916 CALHM2 1 0.63 0.1 7 3 74.14 63 7.37 Yes 50 0.25 No 27 0.61 Yes -32 0.23 No 51 14.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 105210331 - NM_015916 CALHM2 1 1.83 0.53 28 1.39 81.89 24 5 No 11 1.56 Yes 0 0 No -23 0.95 Yes 47 91.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105210558 - NM_015916 CALHM2 1 17.3 4.51 68 9.92 73.8 30 4.91 No 43 0.26 No 29 0.69 Yes -36 0.65 No 34 70.52 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 105210558 - NM_015916 CALHM2 1 3.84 0.93 41 9.92 73.8 30 4.91 No 43 0.26 No 29 0.69 Yes -36 0.65 No 34 70.52 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 105210940 - NM_015916 CALHM2 1 96.24 9.11 70 5.74 86.95 25 5.29 No 25 1.56 Yes 24 0.99 Yes -24 0.97 Yes 46 97.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 105210959 - NM_015916 CALHM2 1 22.07 1.96 57 7.43 89.26 19 5 No 6 1.56 Yes 24 0.99 Yes -18 0.58 No 52 65.65 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 105211794 - NM_015916 CALHM2 1 3.1 0.31 21 4.76 72.23 26 5.66 Yes 13 0.46 No 25 0.88 Yes -25 0.67 Yes 45 66.48 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 90864795 + NM_006888 CALM1 1 0.31 1.61 49 10.58 89.77 22 6.24 Yes NA NA NA 21 0.32 Yes -21 0.62 No 49 90.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 90865334 + NM_006888 CALM1 1 0.38 2.11 60 6.53 76.53 22 5.18 No 1 0.85 Yes 21 0.85 Yes -21 0.75 Yes 49 83.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 90870742 + NM_006888 CALM1 1 0.01 0.1 7 0.4 68.34 25 5.38 No 69 0.43 No 24 0.96 Yes -24 0.95 Yes 46 84.86 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 47387942 - NM_001305625 CALM2 1 0.02 0.35 20 -5.73 77.38 88 6.35 Yes 21 1.86 Yes 0 0 No -29 0.93 Yes 41 89.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47389769 - NM_001305625 CALM2 1 0.05 0.74 35 1.49 67.05 29 5.47 No 58 0.86 Yes 0 0 No -28 0.84 Yes 42 81.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47394830 - NM_001305625 CALM2 1 0.05 0.68 31 3.97 84.41 41 7.25 Yes 54 2.04 Yes 40 0.58 Yes -40 0.56 No 30 83.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 47109250 + NM_001329922 CALM3 1 0.02 0.15 8 5.89 73.09 54 6.76 Yes 8 1.27 Yes 0 0 No -20 0.59 No 50 84.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 47111122 + NM_001329922 CALM3 1 0.04 0.46 20 5.58 82.88 27 5.82 Yes 26 1.01 Yes 0 0 No -34 0.42 No 36 66.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 47111455 + NM_001329922 CALM3 1 0.06 0.56 27 -5.95 74.57 26 7.4 Yes 13 2.36 Yes 23 0.92 Yes -25 0.82 Yes 45 81.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 47112069 + NM_001329922 CALM3 1 0.05 0.6 29 -3.9 51.59 42 5.62 Yes 14 1.66 Yes 24 0.82 Yes -26 0.91 Yes 44 77.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 47112122 + NM_001329922 CALM3 1 0.02 0.22 11 -2.67 65.7 29 5.38 No 67 1.63 Yes 0 0 No -44 0.48 No 26 51.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 47112383 + NM_001329922 CALM3 1 0.01 0.13 9 -11.58 69.99 32 7.21 Yes 19 2.47 Yes 0 0 No -31 0.91 Yes 39 91.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13050011 + NM_004343 CALR 1 0 0.1 7 6.36 76.29 25 5.55 No 65 1.54 Yes 0 0 No -22 0.52 No 46 65.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 13051059 + NM_004343 CALR 1 0.01 0.33 21 -12.53 0 22 7.42 Yes 9 2.26 Yes 0 0 No -21 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 13051099 + NM_004343 CALR 1 0 0.21 12 2.65 71.53 40 5.73 Yes 49 2.21 Yes 0 0 No -29 0.46 No 39 46.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 13051578 + NM_004343 CALR 1 0 0.17 11 -3.22 0 18 4.24 No 38 2.03 Yes 0 0 No -50 0.86 Yes 20 89.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13054349 + NM_004343 CALR 1 0.01 0.54 28 -6.15 0 25 7.32 Yes 12 2.3 Yes 25 0.94 Yes -24 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 13052133 + NM_004343 CALR 1 0.01 0.29 14 1.22 0 35 4.82 No 75 -2.9 No 0 0 No -26 0.82 Yes 44 76.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 13053429 + NM_004343 CALR 1 0.01 0.25 15 8.36 85.05 35 6.4 Yes 22 1.39 Yes 0 0 No -25 0.62 No 36 67.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 13053433 + NM_004343 CALR 1 0 0.13 7 1.94 0 39 6.71 Yes 26 1.38 Yes 0 0 No -29 0.6 No 32 63.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 13054244 + NM_004343 CALR 1 0 0.13 7 11.34 91.33 27 5.74 Yes 47 1.59 Yes 0 0 No -26 0.93 Yes 44 89.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13054529 + NM_004343 CALR 1 0 0.13 9 -28.29 0 25 5.57 Yes 12 0.78 Yes 0 0 No -24 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 13054530 + NM_004343 CALR 1 0.21 8.56 72 0.99 0 26 5.66 Yes 13 0.77 Yes 0 0 No -25 0.92 Yes 45 85.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13055025 + NM_004343 CALR 1 0.01 0.46 25 9.72 76.49 45 6.91 Yes 55 2.18 Yes 44 0.54 Yes -44 0.55 No 32 65.33 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 128393871 + NM_001199671 CALU 1 0.19 0.24 15 7.18 81.95 24 5.19 No 74 1.35 Yes 0 0 No -23 0.84 Yes 47 84.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128394319 + NM_001199671 CALU 1 0.21 0.31 19 -1.83 0 38 5.73 Yes 25 1.35 Yes 0 0 No -37 0.82 Yes 33 88.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128394582 + NM_001199671 CALU 1 23.48 38.14 72 9.17 86.41 18 6.53 Yes 5 1.23 Yes 24 0.7 Yes -24 0.69 Yes 46 57.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 128394582 + NM_001199671 CALU 1 0.71 1.17 46 9.17 86.41 18 6.53 Yes 5 1.23 Yes 24 0.7 Yes -24 0.69 Yes 46 57.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 128407491 + NM_001199671 CALU 1 0.04 0.11 8 -0.15 0 17 5.29 No 55 -3.72 No 0 0 No -19 0.39 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 12396042 + NM_020397 CAMK1D 1 0.66 0.24 12 6.63 88.11 27 5.07 No 14 0.49 No 0 0 No -26 0.97 Yes 44 98.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 12442014 + NM_020397 CAMK1D 1 0.46 0.13 7 9.06 86.76 20 5.1 No 61 -3.39 No 0 0 No -24 0.7 Yes 46 67.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 12445097 + NM_020397 CAMK1D 1 0.54 0.14 9 2.63 70.28 14 5.06 No 1 1 Yes 0 0 No -28 0.81 Yes 42 87.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12445100 + NM_020397 CAMK1D 1 1.27 0.43 21 4.21 86.16 17 5.28 No 4 0.97 Yes 0 0 No -31 0.75 Yes 39 85.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12515579 + NM_020397 CAMK1D 1 0.38 0.13 8 10.61 88.62 19 5.92 Yes 49 0.82 Yes 0 0 No -25 0.68 Yes 52 72.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12571820 + NM_020397 CAMK1D 1 1.19 0.44 22 8.12 98.16 16 5.34 No 3 0.82 Yes 0 0 No -28 0.58 No 49 47.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12822440 + NM_020397 CAMK1D 1 0.41 0.25 16 8.01 79.94 52 9.42 Yes 7 0.78 Yes 0 0 No -19 0.83 Yes 51 43.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 12856493 + NM_020397 CAMK1D 1 0.36 0.19 9 7.25 89.21 27 5.38 No 67 0.47 No 0 0 No -26 0.82 Yes 44 87.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 12857977 + NM_020397 CAMK1D 1 0.57 0.33 20 8.2 77.39 34 5.72 Yes 21 0.6 No 0 0 No -33 0.76 Yes 37 83.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 114376978 - NM_001321585 CAMK2D 1 16.66 10.96 72 8.43 84.76 21 5.48 No 65 0.92 Yes 21 0.85 Yes -21 0.85 Yes 49 86.63 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 114430829 - NM_001321585 CAMK2D 1 3.89 4.03 70 4.01 82.51 24 6.02 Yes 60 1.7 Yes 29 0.85 Yes -32 0.41 No 38 63.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 114468873 - NM_001321585 CAMK2D 1 8.78 6.6 72 6.25 80.85 29 6.86 Yes 65 1.42 Yes 28 0.95 Yes -28 0.95 Yes 42 95.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 114468873 - NM_001321585 CAMK2D 1 3.2 2.1 61 6.25 80.85 29 6.86 Yes 65 1.42 Yes 28 0.95 Yes -28 0.95 Yes 42 95.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 114484383 - NM_001321585 CAMK2D 1 0.14 0.17 10 7.45 95.84 28 5.29 No 49 0.15 No 0 0 No -27 0.54 No 16 54.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 114486800 - NM_001321585 CAMK2D 1 0.28 0.36 21 3.01 0 29 9.89 Yes 16 1.53 Yes 0 0 No -28 0.83 Yes 42 84.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 114570075 - NM_001321585 CAMK2D 1 0.19 0.21 14 5.28 87.46 25 6.6 Yes 12 0.65 No 0 0 No -24 0.73 Yes 46 90.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 114681524 - NM_001321585 CAMK2D 1 0.15 0.14 9 8.2 83.92 18 5.92 Yes 5 1.99 Yes 0 0 No -24 0.61 No 46 67.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75574255 - NM_172169 CAMK2G 1 1.47 0.22 12 -3.75 0 14 4.24 No 39 1.24 Yes 0 0 No -51 0.85 Yes 19 90.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 75579404 - NM_172169 CAMK2G 1 12.81 3.89 71 5.25 64.55 68 10.58 Yes 55 2.29 Yes 24 0.18 Yes -34 0.37 No 27 6.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 75608195 - NM_172169 CAMK2G 1 0.45 0.17 8 8.25 93.71 28 5.29 No 74 1.32 Yes 0 0 No -17 0.53 No 53 52.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75632818 - NM_172169 CAMK2G 1 10.81 1.79 59 11.44 86.89 27 5.74 Yes 59 1.28 Yes 0 0 No -26 0.6 No 44 69.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 110564974 + NM_001323375 CAMK4 1 2.57 1.93 63 8.16 91.11 24 4.76 No 11 0.3 No 0 0 No -23 0.95 Yes 47 96.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 110579680 + NM_001323375 CAMK4 1 0.29 0.24 13 8.45 95.08 38 5.46 No 34 0.12 No 0 0 No -37 0.78 Yes 33 80.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 110679745 + NM_001323375 CAMK4 1 0.12 0.11 7 4.55 83.39 28 5.74 Yes 43 1.3 Yes 0 0 No -55 0.33 No 15 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 110684451 + NM_001323375 CAMK4 1 0.39 0.32 15 6.64 84.35 44 6.21 Yes 54 -2.48 No 0 0 No -23 0.85 Yes 47 81.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 110700640 + NM_001323375 CAMK4 1 0.75 0.54 28 7.62 88.36 20 4.53 No 15 0.35 No 27 0.72 Yes -22 0.69 Yes 43 74.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 110737584 + NM_001323375 CAMK4 1 0.12 0.11 7 8.2 77.85 29 5.66 Yes 65 -3.01 No 0 0 No -25 0.62 No 45 49.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 110752203 + NM_001323375 CAMK4 1 0.32 0.32 19 2.26 81.83 23 4.8 No 75 -6.25 No 22 0.57 Yes -22 0.39 No 47 42.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 110774801 + NM_001323375 CAMK4 1 0.36 0.35 17 10.14 87.27 31 5.81 Yes -2 0.49 No 0 0 No -25 0.52 No 45 74.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 110800625 + NM_001323375 CAMK4 1 1 0.53 27 7.01 81.35 34 5.87 Yes 73 0.65 No 0 0 No -34 0.55 No 36 83.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 110812848 + NM_001323375 CAMK4 1 0.15 0.11 7 8.25 89.23 23 4.89 No 10 1.24 Yes 0 0 No -22 0.97 Yes 48 97.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121686665 - NM_001270486 CAMKK2 1 4.17 1.65 54 7.27 81.34 23 8.78 Yes 10 2.02 Yes 0 0 No -22 0.93 Yes 48 87.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121706775 - NM_001270486 CAMKK2 1 0.43 0.31 18 3.64 73.93 25 6 Yes 12 1.07 Yes 0 0 No -24 0.92 Yes 46 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121707431 - NM_001270486 CAMKK2 1 1.82 1.19 44 8.68 91.41 19 5 No 39 -1.21 No 21 0.72 Yes -21 0.89 Yes 49 87.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 121707688 - NM_001270486 CAMKK2 1 0.23 0.15 10 3.6 85.02 17 7 Yes 4 1.2 Yes 28 0.3 Yes -30 0.44 No 54 59.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 121708385 - NM_001270486 CAMKK2 1 1.39 0.86 42 6.49 82.7 26 5.1 No 13 1.48 Yes 0 0 No -25 0.76 Yes 45 87.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44599933 + NM_024766 CAMKMT 1 0.33 0.11 7 6.47 84.16 18 3.87 No 0 0.49 No 31 0.49 Yes -32 0.44 No 53 60.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 44619023 + NM_024766 CAMKMT 1 15.71 2.71 64 6.82 81.08 23 6.17 Yes 10 0.84 Yes 22 0.89 Yes -22 0.76 Yes 48 76.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 44619027 + NM_024766 CAMKMT 1 2.39 0.38 22 -0.43 0 27 6.45 Yes 14 0.84 Yes 0 0 No -39 0.77 Yes 31 78.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44628158 + NM_024766 CAMKMT 1 1.36 0.24 14 8.15 87.15 35 6.77 Yes 22 1.31 Yes 23 0.87 Yes -34 0.64 No 36 78.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 44639151 + NM_024766 CAMKMT 1 2.58 0.44 27 9.77 86.44 53 8.63 Yes 40 1.56 Yes 0 0 No -35 0.86 Yes 35 79.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44669079 + NM_024766 CAMKMT 1 2.38 0.39 19 9.87 91.2 41 5 No 21 0.9 Yes 0 0 No -34 0.77 Yes 36 90.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44670730 + NM_024766 CAMKMT 1 1 0.17 11 6.28 83.04 29 5.64 Yes 31 0.61 No 0 0 No -28 0.85 Yes 42 74.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 44683706 + NM_024766 CAMKMT 1 22.1 3.86 69 12.78 88.59 17 6.07 Yes 37 0.29 No 34 0.74 Yes -23 0.65 No 47 75.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 44702919 + NM_024766 CAMKMT 1 3.97 0.64 35 6.46 83.08 20 3.99 No 46 0.8 Yes 0 0 No -33 0.57 No 51 67.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 44732771 + NM_024766 CAMKMT 1 4.95 0.83 39 6.48 84.99 32 5.66 Yes 19 1.46 Yes 0 0 No -31 0.77 Yes 39 78.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44776693 + NM_024766 CAMKMT 1 9.63 1.74 57 9.72 86.29 36 8.05 Yes 10 0.49 No 29 0.33 Yes -23 0.25 No 48 35.96 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 44942422 + NM_024766 CAMKMT 1 0.86 0.17 9 -4.4 0 12 4.18 No -1 1.13 Yes 27 0.42 Yes -12 0.65 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 44968374 + NM_024766 CAMKMT 1 0.84 0.19 12 7.31 80.51 22 4.8 No 56 0.75 No 0 0 No -26 0.63 No 45 50.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 44974483 + NM_024766 CAMKMT 1 1.29 0.26 15 9.48 94.44 20 5.1 No 54 0.85 Yes 0 0 No -26 0.81 Yes 44 64.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 134076755 + NM_001745 CAMLG 1 0.66 0.39 21 1.26 80.85 20 4.38 No 61 -4.26 No 0 0 No -30 0.6 No 40 68.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 138749520 - NM_015447 CAMSAP1 1 0.57 0.28 15 5.4 81.96 17 3.59 No 4 1.57 Yes 0 0 No -22 0.95 Yes 48 97.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 138755694 - NM_015447 CAMSAP1 1 0.46 0.24 15 3.03 67.44 69 7.25 Yes 12 1.64 Yes 0 0 No -24 0.95 Yes 46 96.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 138773639 - NM_015447 CAMSAP1 1 0.43 0.28 16 -12.81 72.62 26 5.48 No 63 -3.17 No 0 0 No -23 0.83 Yes 47 82.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 138774223 - NM_015447 CAMSAP1 1 1.15 0.71 35 7.85 88.96 30 5.92 Yes 67 1.11 Yes 0 0 No -29 0.78 Yes 41 66.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 138774275 - NM_015447 CAMSAP1 1 0.64 0.4 21 6.59 77.45 28 5.47 No 15 1.13 Yes 0 0 No -23 0.77 Yes 47 90.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 138780120 - NM_015447 CAMSAP1 1 1.17 0.32 16 8.03 83.12 26 6.93 Yes 13 2.31 Yes 0 0 No -25 0.81 Yes 45 93.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 200801886 + NM_001297707 CAMSAP2 1 0.65 0.15 7 5.52 80.17 21 5 No 68 0.78 Yes 0 0 No -20 0.86 Yes 50 90.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 200816385 + NM_001297707 CAMSAP2 1 23 10.21 72 9.92 87.26 20 3.87 No 7 1 Yes 29 0.86 Yes -29 0.58 No 51 62.35 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 6860029 + NM_015215 CAMTA1 1 0.14 0.19 11 4.32 86.61 22 6.48 Yes 9 1.06 Yes 0 0 No -35 0.36 No 35 61.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 6867042 + NM_015215 CAMTA1 1 1.02 1.32 47 3.73 85.15 23 5 No 10 0.34 No 22 0.78 Yes -22 0.78 Yes 48 79.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4872275 - NM_001171166 CAMTA2 1 0.51 0.26 17 2.4 82.67 30 5.99 Yes 75 1.54 Yes 27 0.71 Yes -29 0.62 No 41 64.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 4872816 - NM_001171166 CAMTA2 1 0.3 0.14 9 6.46 73.94 23 6 Yes 10 2.39 Yes 22 0.92 Yes -22 0.92 Yes 48 92.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4876987 - NM_001171166 CAMTA2 1 0.44 0.22 15 2.55 71.9 22 5.83 Yes 9 0.63 No 0 0 No -24 0.58 No 46 51.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4885035 - NM_001171166 CAMTA2 1 0.18 0.13 9 5.42 81.43 21 5.74 Yes 73 1.71 Yes 0 0 No -26 0.94 Yes 44 90.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4885038 - NM_001171166 CAMTA2 1 0.59 0.4 22 6.21 89.7 18 5.48 No 70 1.71 Yes 23 0.93 Yes -23 0.94 Yes 47 91.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4885038 - NM_001171166 CAMTA2 1 2.65 1.72 56 6.21 89.7 18 5.48 No 70 1.71 Yes 23 0.93 Yes -23 0.94 Yes 47 91.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4885471 - NM_001171166 CAMTA2 1 9.68 4.15 70 3.36 77.34 20 5.1 No 34 -0.32 No 24 0.74 Yes -24 0.59 No 51 55.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 4885523 - NM_001171166 CAMTA2 1 7.44 3.18 70 0.92 71.33 9 4.13 No 70 -5.59 No 22 0.81 Yes -18 0.45 No 48 34.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 4886151 - NM_001171166 CAMTA2 1 0.18 0.14 8 -2.89 65.19 33 6.23 Yes 20 0.03 No 0 0 No -32 0.66 No 38 45.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4886336 - NM_001171166 CAMTA2 1 0.23 0.13 7 -7.11 72.05 23 5.39 No 10 0.96 Yes 0 0 No -22 0.8 Yes 48 78.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 67685297 + NM_001329674 CAND1 1 0.09 0.21 13 8.8 93.61 33 5.71 Yes 20 1.25 Yes 0 0 No -32 0.64 No 38 70.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 67688019 + NM_001329674 CAND1 1 0.29 0.99 41 6 86.93 26 4.99 No 13 0.69 No 0 0 No -25 0.94 Yes 45 88.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 67688047 + NM_001329674 CAND1 1 0.04 0.13 8 8.62 86.55 27 6.04 Yes 14 1.66 Yes 0 0 No -26 0.67 Yes 44 74.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 67691244 + NM_001329674 CAND1 1 0.09 0.47 23 8.72 82.93 19 6.93 Yes 6 2.28 Yes 0 0 No -25 0.46 No 45 63.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76988223 - NM_001159772 CANT1 1 0.44 0.36 22 8.18 74.81 32 7.28 Yes 19 1.27 Yes 31 0.94 Yes -31 0.97 Yes 39 97.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 76993816 - NM_001159772 CANT1 1 0.46 0.33 19 0.78 70.43 24 5.83 Yes 11 0.13 No 0 0 No -23 0.77 Yes 47 61.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 179126575 + NM_001746 CANX 1 0.36 2.72 57 0.55 59.97 27 5.43 No 45 -4.42 No 26 0.88 Yes -26 0.6 No 44 68.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179129492 + NM_001746 CANX 1 0.03 0.24 11 -0.72 0 126 9.8 Yes 5 0.7 No 0 0 No -26 0.76 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 179131155 + NM_001746 CANX 1 0.13 1.07 42 7.95 86.88 18 4.9 No 5 0.65 No 22 0.67 Yes -22 0.82 Yes 48 76.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179131216 + NM_001746 CANX 1 0.08 0.6 29 4.13 72.97 14 5.53 No 66 0.59 No 0 0 No -29 0.3 No 57 27.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179133249 + NM_001746 CANX 1 0.01 0.17 11 -3.68 0 31 6.84 Yes 2 0.55 No 23 0.79 Yes -29 0.38 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179135188 + NM_001746 CANX 1 0.02 0.39 14 7.01 80.14 31 5.57 Yes 31 0.15 No 0 0 No -31 0.74 Yes 39 61.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 179135203 + NM_001746 CANX 1 0.01 0.19 11 -10.54 0 9 3.87 No 46 0.14 No 31 0.74 Yes -46 0.61 No 24 62.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179136879 + NM_001746 CANX 1 0.05 0.97 45 -3.46 0 10 3.87 No 14 0.93 Yes 21 0.8 Yes -31 0.84 Yes 39 85.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179136919 + NM_001746 CANX 1 0.09 1.88 59 5.45 82.91 34 5.87 Yes 54 0.9 Yes 21 0.8 Yes -21 0.83 Yes 49 84.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179142937 + NM_001746 CANX 1 0.02 0.33 19 2.24 73.84 24 6.16 Yes 11 1.33 Yes 0 0 No -23 0.88 Yes 47 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179142899 + NM_001746 CANX 1 0.07 1.31 47 6.93 71.03 25 5.75 Yes 12 0.79 Yes 24 0.76 Yes -24 0.8 Yes 46 77.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179142937 + NM_001746 CANX 1 0.02 0.26 14 2.24 73.84 24 6.16 Yes 11 1.33 Yes 0 0 No -23 0.88 Yes 47 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179150642 + NM_001746 CANX 1 0.03 0.57 21 -0.24 70.11 23 5.03 No 10 -2.06 No 24 0.86 Yes -22 0.68 Yes 48 63.73 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 179150664 + NM_001746 CANX 1 0.02 0.31 19 3.62 0 25 3.85 No 12 0.41 No 0 0 No -24 0.74 Yes 42 69.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 179151658 + NM_001746 CANX 1 0.02 0.36 23 -18.22 0 32 6.06 Yes 51 -4.28 No 0 0 No -28 0.41 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179151663 + NM_001746 CANX 1 0.03 0.58 25 -4.62 0 9 3.87 No 56 -4.6 No 0 0 No -33 0.41 No 37 33.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179153681 + NM_001746 CANX 1 0.01 0.11 7 -11.4 0 15 5.43 No 2 0.92 Yes 27 0.79 Yes -23 0.87 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 179153683 + NM_001746 CANX 1 0.47 8.96 72 2.17 78.76 17 5.61 Yes 4 0.9 Yes 27 0.79 Yes -25 0.88 Yes 45 94.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 40507100 + NM_006367 CAP1 1 5.09 13.15 66 6.94 94.4 33 5.71 Yes 21 -2.2 No 28 0.23 Yes -32 0.51 No 38 34.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 40508093 + NM_006367 CAP1 1 0.09 0.24 14 3.77 67.11 22 5.83 Yes 9 1.33 Yes 0 0 No -21 0.93 Yes 49 94.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 40508389 + NM_006367 CAP1 1 0.07 0.19 12 0.6 75.38 24 4.32 No 32 0.16 No 0 0 No -23 0.83 Yes 42 49.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 40523117 + NM_006367 CAP1 1 0.06 0.17 10 -0.31 0 32 6.7 Yes 19 0.91 Yes 24 0.79 Yes -31 0.84 Yes 39 86.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 40525005 + NM_006367 CAP1 1 28.44 75.14 72 7.19 84.09 26 5.79 Yes 64 0.85 Yes 25 0.68 Yes -25 0.53 No 45 80.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 40525741 + NM_006367 CAP1 1 6.57 44.21 72 6.31 95.15 30 7.6 Yes 28 1.3 Yes 26 0.94 Yes -29 0.86 Yes 41 90.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 85623134 - NM_001256139 CAPG 1 0.27 0.18 12 8.66 81.8 28 5.34 No 28 0.61 No 28 0.46 Yes -28 0.76 Yes 42 74.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 85628381 - NM_001256139 CAPG 1 0.11 0.11 7 0.95 0 16 4.56 No 43 -3.68 No 0 0 No -20 0.7 Yes 52 66.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 64953361 + NM_005186 CAPN1 1 0.04 0.11 7 1.37 72.77 24 5.48 No 23 -2.5 No 23 0.78 Yes -23 0.85 Yes 47 56.43 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 64963202 + NM_005186 CAPN1 1 0.08 0.18 12 8.54 79.01 51 7.21 Yes 25 1.2 Yes 0 0 No -38 0.65 No 32 72.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 241534014 + NM_023083 CAPN10 1 2.61 0.38 21 2.66 0 15 4.58 No 2 1.01 Yes 0 0 No -19 0.9 Yes 51 89.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 241534592 + NM_023083 CAPN10 1 1.33 0.43 20 8.19 85.89 24 5.47 No 22 -0.92 No 0 0 No -23 0.71 Yes 43 39.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 241535350 + NM_023083 CAPN10 1 21.84 5.31 70 9.37 85.53 35 5.53 No 22 0.44 No 34 0.65 Yes -34 0.83 Yes 36 76.88 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 241536266 + NM_023083 CAPN10 1 6.91 1.57 51 -2.77 76.59 41 7.15 Yes 28 1.05 Yes 30 0.53 Yes -29 0.46 No 41 59.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 241536305 + NM_023083 CAPN10 1 0.57 0.13 8 1.38 76.76 13 6.68 Yes 67 1.04 Yes 0 0 No -21 0.45 No 49 71.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 599620 + NM_005632 CAPN15 1 1.49 1.13 39 -1.49 0 10 3.87 No 10 2.2 Yes 0 0 No -22 0.84 Yes 48 65.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 599692 + NM_005632 CAPN15 1 0.63 0.42 21 6.24 89.33 30 5.92 Yes 36 -0.35 No 0 0 No -23 0.83 Yes 47 88.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 600039 + NM_005632 CAPN15 1 0.16 0.11 7 6.62 90.33 11 5.19 No 34 1.03 Yes 0 0 No -20 0.61 No 50 51.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 602622 + NM_005632 CAPN15 1 3.03 2.39 60 0.46 0 14 4.47 No 24 0.73 No 0 0 No -36 0.93 Yes 50 59.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 602674 + NM_005632 CAPN15 1 0.28 0.24 12 6.47 76.28 20 6.06 Yes 76 0.73 No 0 0 No -19 0.43 No 51 37.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 603314 + NM_005632 CAPN15 1 2.48 1.99 56 11.17 86.18 23 5.07 No 59 1.11 Yes 18 0.9 Yes -27 0.69 Yes 48 61.61 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 603342 + NM_005632 CAPN15 1 10.98 8.29 72 5.07 0 23 6.08 Yes 10 1.85 Yes 0 0 No -22 0.97 Yes 48 95.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 223945406 + NM_001146068 CAPN2 1 0.19 0.11 8 5.74 85.68 24 5.1 No 11 0.08 No 0 0 No -23 0.85 Yes 47 92.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 223960111 + NM_001146068 CAPN2 1 0.17 0.17 9 6.96 89.49 29 5.79 Yes 26 0.47 No 28 0.57 Yes -29 0.31 No 42 44.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 42704283 + NM_173087 CAPN3 1 3.73 0.25 13 8.32 84.2 31 5.51 No 0 1.34 Yes 30 0.78 Yes -30 0.72 Yes 40 69.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 15252308 + NM_014296 CAPN7 1 2.39 1.15 41 6.94 81.33 29 6.4 Yes 16 0.48 No 28 0.74 Yes -28 0.69 Yes 50 58.04 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 15252467 + NM_014296 CAPN7 1 0.32 0.17 10 12.64 89.17 31 5.57 Yes 67 -2.22 No 0 0 No -30 0.29 No 44 71.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 15261396 + NM_014296 CAPN7 1 0.25 0.22 13 7.18 88.91 35 6.86 Yes 51 1.69 Yes 0 0 No -34 0.94 Yes 36 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15262292 + NM_014296 CAPN7 1 0.39 0.35 21 -0.64 0 36 6.08 Yes 64 0.24 No 0 0 No -33 0.68 Yes 37 68.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 15267157 + NM_014296 CAPN7 1 0.42 0.36 19 12.4 88.77 34 6.16 Yes 21 0.26 No 0 0 No -33 0.63 No 37 83.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 15273617 + NM_014296 CAPN7 1 6.3 5.76 71 6.02 88.27 23 5.19 No 10 0.63 No 22 0.91 Yes -22 0.83 Yes 48 92.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 15292481 + NM_014296 CAPN7 1 0.86 0.33 21 6.94 0 17 4.58 No 55 1.08 Yes 24 0.49 Yes -16 0.66 Yes 54 71.8 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36636677 + NM_001302633 CAPNS1 1 0.13 1.06 47 3.48 64.61 21 6.08 Yes 32 -2.68 No 25 0.53 Yes -25 0.59 No 50 74.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 34098713 + NM_005898 CAPRIN1 1 0.02 0.19 12 0.96 60.69 61 8.8 Yes 59 0.82 Yes 0 0 No -60 0.51 No 22 73.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 34103779 + NM_005898 CAPRIN1 1 0.03 0.26 14 9.47 93.31 28 5.29 No 54 0.78 Yes 0 0 No -54 0.47 No 16 56.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 34107908 + NM_005898 CAPRIN1 1 0.09 0.68 30 6.55 82.53 24 6.13 Yes 74 0.86 Yes 0 0 No -23 0.71 Yes 47 88.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 34112097 + NM_005898 CAPRIN1 1 0.05 0.39 19 5.01 84.73 20 4.89 No 37 1.16 Yes 0 0 No -24 0.71 Yes 46 79.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 34119232 + NM_005898 CAPRIN1 1 0.03 0.21 12 3.84 61.78 27 5.44 No 25 0.51 No 18 0.92 Yes -26 0.77 Yes 44 65.72 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 30863402 - NM_001002259 CAPRIN2 1 3.28 0.36 22 0.25 68.2 23 4.53 No 32 1.7 Yes 0 0 No -22 0.89 Yes 48 48.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 30863449 - NM_001002259 CAPRIN2 1 29.16 2.49 63 2.96 74.25 23 6.14 Yes 10 1 Yes 22 0.9 Yes -22 0.8 Yes 48 84.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 30864717 - NM_001002259 CAPRIN2 1 2.9 0.29 17 9.5 83.1 34 6.63 Yes 21 1.36 Yes 33 0.69 Yes -28 0.66 No 42 64.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 30868016 - NM_001002259 CAPRIN2 1 60.43 2.32 58 2.77 83.32 25 5.1 No 68 1.04 Yes 25 0.6 Yes -25 0.67 Yes 45 62.76 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 30868076 - NM_001002259 CAPRIN2 1 165.66 6.22 72 3.02 89.89 35 6.25 Yes 8 1.04 Yes 31 0.76 Yes -34 0.37 No 36 67.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 30868889 - NM_001002259 CAPRIN2 1 6.97 0.28 14 7.88 83.74 30 5.57 Yes 54 1.28 Yes 0 0 No -30 0.32 No 46 60.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 30888908 - NM_001002259 CAPRIN2 1 1.07 0.13 8 6.53 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.71 Yes 51 88.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 30894037 - NM_001002259 CAPRIN2 1 1.11 0.13 8 -3.44 0 38 6.14 Yes 6 0.33 No 0 0 No -37 0.58 No 33 82.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 113162982 + NM_006135 CAPZA1 1 0.11 0.99 39 11.11 89.78 28 6.91 Yes 15 1.35 Yes 0 0 No -28 0.59 No 42 80.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 113185020 + NM_006135 CAPZA1 1 0.01 0.13 7 5.41 83.74 20 7.14 Yes 7 1.29 Yes 0 0 No -19 0.84 Yes 51 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 113186489 + NM_006135 CAPZA1 1 0.02 0.13 7 1.25 83.57 35 6.01 Yes 22 0.78 Yes 0 0 No -35 0.66 Yes 35 74.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 113186493 + NM_006135 CAPZA1 1 0.04 0.28 16 1.59 0 39 6.3 Yes 26 0.79 Yes 0 0 No -39 0.68 Yes 31 74.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 113189376 + NM_006135 CAPZA1 1 0.14 1.28 49 9.48 93.82 20 5.83 Yes 7 1.02 Yes 27 0.36 Yes -19 0.77 Yes 51 80.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 113201642 + NM_006135 CAPZA1 1 0.02 0.43 22 -11.85 0 24 6.16 Yes 11 1.06 Yes 24 0.74 Yes -23 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 113203491 + NM_006135 CAPZA1 1 0.01 0.18 10 3.58 87.56 45 6.69 Yes 32 1.05 Yes 0 0 No -41 0.61 No 29 72.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 113212517 + NM_006135 CAPZA1 1 0.77 7.14 72 8.83 92.06 25 5.88 Yes 59 0.54 No 0 0 No -34 0.5 No 36 67.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 113212569 + NM_006135 CAPZA1 1 0.29 2.74 60 6.43 75.63 32 5.74 Yes 19 0.85 Yes 0 0 No -31 0.64 No 39 71.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 113212617 + NM_006135 CAPZA1 1 0.3 2.74 63 -2.5 0 26 6.12 Yes 67 0.84 Yes 0 0 No -25 0.94 Yes 45 94.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 113212676 + NM_006135 CAPZA1 1 0.02 0.15 9 3.67 78.1 19 4.89 No 72 0.39 No 0 0 No -22 0.69 Yes 48 76.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 116520120 + NM_006136 CAPZA2 1 0.26 1.11 49 9.27 94.37 23 5.76 Yes 10 1.66 Yes 22 0.81 Yes -22 0.93 Yes 48 92.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 116524921 + NM_006136 CAPZA2 1 0.12 0.51 27 9 86.2 18 6.3 Yes 5 0.5 No 0 0 No -29 0.46 No 39 44.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 116538801 + NM_006136 CAPZA2 1 0.04 0.21 8 1.37 69.71 56 6.94 Yes 27 1.21 Yes 22 0.75 Yes -26 0.62 No 44 48.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 116550266 + NM_006136 CAPZA2 1 0.08 0.32 19 10.18 86.56 32 7.82 Yes 74 0.7 No 27 0.67 Yes -31 0.8 Yes 39 87.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 116550266 + NM_006136 CAPZA2 1 0.54 2.21 62 10.18 86.56 32 7.82 Yes 74 0.7 No 27 0.67 Yes -31 0.8 Yes 39 87.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 116554997 + NM_006136 CAPZA2 1 0.04 0.22 14 0.37 62.18 33 6.63 Yes 70 1.67 Yes 0 0 No -32 0.42 No 38 38.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19738806 - NM_001313932 CAPZB 1 0.01 0.15 10 8.83 78.07 42 6.9 Yes 72 0.06 No 0 0 No -21 0.53 No 29 62.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 19754116 - NM_001313932 CAPZB 1 0.03 0.17 12 2.34 68.49 16 6.35 Yes 35 0.1 No 0 0 No -31 0.54 No 39 70.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 2946473 - NM_001324281 CARD11 1 1.19 0.76 31 -0.22 0 30 5.83 Yes 71 -3.1 No 0 0 No -27 0.64 No 43 64.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 2958564 - NM_001324281 CARD11 1 1.07 0.75 35 3.31 75.22 23 6.03 Yes 67 -4.21 No 0 0 No -23 0.71 Yes 48 57.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 2958697 - NM_001324281 CARD11 1 0.56 0.39 21 7.9 84.37 23 4.98 No 10 0.47 No 0 0 No -22 0.87 Yes 48 80.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2962391 - NM_001324281 CARD11 1 0.5 0.17 10 3.26 0 26 6.04 Yes NA NA NA 0 0 No -26 0.53 No 46 54.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 2962443 - NM_001324281 CARD11 1 0.48 0.17 12 8.75 82.31 25 5.1 No 55 1.04 Yes 0 0 No -23 0.77 Yes 47 71.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2962464 - NM_001324281 CARD11 1 0.27 0.14 9 5.29 80.36 32 5.66 Yes 65 1.09 Yes 0 0 No -31 0.5 No 39 67.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 2968330 - NM_001324281 CARD11 1 17.09 8.18 72 5.88 72.89 28 8.17 Yes 15 1.59 Yes 24 0.82 Yes -27 0.72 Yes 43 71.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2972215 - NM_001324281 CARD11 1 0.5 0.4 25 3.75 0 9 3.87 No 38 0.97 Yes 0 0 No -50 0.88 Yes 20 94.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2984206 - NM_001324281 CARD11 1 1.34 0.99 38 7.62 84.98 51 5.28 No 34 0.31 No 22 0.96 Yes -23 0.74 Yes 47 79.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 104914273 - NM_001017534 CARD16 1 116.79 40.92 72 11.01 88.31 38 5.82 Yes 0 0.4 No 22 0.82 Yes -22 0.74 Yes 43 53.32 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 104915300 - NM_001017534 CARD16 1 1.3 0.46 21 1.27 76.4 20 5.16 No 63 0.01 No 0 0 No -19 0.87 Yes 51 69.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 95869960 + NR_134464 CARD19 1 0.3 0.1 7 1.59 0 27 6.83 Yes 14 0.91 Yes 0 0 No -29 0.78 Yes 41 90.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95871272 + NR_134464 CARD19 1 1.05 0.11 7 8.96 92.12 21 5.19 No 8 1.38 Yes 20 0.86 Yes -20 0.88 Yes 50 89.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 95874160 + NR_134464 CARD19 1 12.14 0.79 34 9.01 89.86 27 9.38 Yes 47 1.21 Yes 26 0.96 Yes -26 0.86 Yes 44 91.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 95874499 + NR_134464 CARD19 1 5.08 0.49 23 10.31 93.29 19 5.92 Yes 6 1.25 Yes 18 0.68 Yes -18 0.87 Yes 52 96.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 40844996 + NM_032587 CARD6 1 5.51 0.65 34 8.59 88.56 44 6.93 Yes 31 2.02 Yes 0 0 No -43 0.78 Yes 27 95.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48715668 - NM_001184902 CARD8 1 0.37 0.36 20 8.07 80.02 18 5.32 No 5 0.47 No 0 0 No -22 0.67 Yes 48 77.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48722270 - NM_001184902 CARD8 1 533.65 103.94 72 9.46 88.58 16 5.56 Yes 3 1.49 Yes 25 0.77 Yes -25 0.83 Yes 45 79.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48722270 - NM_001184902 CARD8 1 1.82 0.35 21 9.46 88.58 16 5.56 Yes 3 1.49 Yes 25 0.77 Yes -25 0.83 Yes 45 79.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48722270 - NM_001184902 CARD8 1 0.69 0.17 11 9.46 88.58 16 5.56 Yes 3 1.49 Yes 25 0.77 Yes -25 0.83 Yes 45 79.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48722378 - NM_001184902 CARD8 1 4.19 0.79 39 5.2 73.7 32 5.08 No 44 0.9 Yes 0 0 No -31 0.63 No 39 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 48727126 - NM_001184902 CARD8 1 7.22 7.03 71 7.66 86.18 31 6.29 Yes 18 0.35 No 30 0.16 Yes -38 0.63 No 32 82.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 48727126 - NM_001184902 CARD8 1 0.55 0.57 27 7.66 86.18 31 6.29 Yes 18 0.35 No 30 0.16 Yes -38 0.63 No 32 82.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 48732874 - NM_001184902 CARD8 1 0.75 0.81 28 8.38 89.93 24 5.38 No 11 0.13 No 0 0 No -23 0.44 No 48 49.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 48733914 - NM_001184902 CARD8 1 0.9 0.61 32 5.82 75.76 39 6.71 Yes 56 0.7 No 35 0.06 Yes -32 0.55 No 38 85.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 48733955 - NM_001184902 CARD8 1 19.94 13.82 72 4.52 89.9 28 8.25 Yes 15 0.7 No 24 0.95 Yes -27 0.97 Yes 43 95.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48735017 - NM_001184902 CARD8 1 0.67 0.39 22 4.65 77.36 28 5.45 No 63 0.29 No 0 0 No -27 0.59 No 43 49.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 48735065 - NM_001184902 CARD8 1 0.24 0.15 10 -11.68 80.5 20 5.1 No 15 0.3 No 0 0 No -27 0.76 Yes 43 83.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48736047 - NM_001184902 CARD8 1 0.78 0.42 21 8.12 80.06 40 5.4 No 66 0.29 No 28 0.86 Yes -28 0.82 Yes 42 92.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48736662 - NM_001184902 CARD8 1 0.18 0.13 7 10.15 81.54 30 5.92 Yes 17 0.9 Yes 30 0.73 Yes -30 0.86 Yes 40 83.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48737154 - NM_001184902 CARD8 1 2.04 1.13 48 8.02 85.27 21 5.92 Yes 8 0.4 No 0 0 No -20 0.7 Yes 50 76.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48737238 - NM_001184902 CARD8 1 21.02 12.18 72 5.17 75.83 20 5.63 Yes 7 0.1 No 27 0.7 Yes -27 0.6 No 43 61.44 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 48739022 - NM_001184902 CARD8 1 0.43 0.28 15 7.24 83.95 33 7.4 Yes 49 0.69 No 0 0 No -27 0.72 Yes 38 81.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48741784 - NM_001184902 CARD8 1 3.81 3.6 69 -1.31 0 9 3.87 No 31 1.88 Yes 29 0.93 Yes -35 0.85 Yes 35 96.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48745902 - NM_001184902 CARD8 1 10.42 7.9 72 5.38 85.8 23 5.2 No 44 0.62 No 22 0.91 Yes -22 0.96 Yes 48 97.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48745902 - NM_001184902 CARD8 1 3.1 2.4 63 5.38 85.8 23 5.2 No 44 0.62 No 22 0.91 Yes -22 0.96 Yes 48 97.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48749553 - NM_001184902 CARD8 1 0.61 0.49 24 0.97 77.67 26 6.16 Yes 46 -3.66 No 0 0 No -25 0.55 No 45 75.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 48749639 - NM_001184902 CARD8 1 1.9 1.6 43 2.66 77.56 22 6.56 Yes 9 0.55 No 0 0 No -21 0.72 Yes 49 62.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 48751599 - NM_001184902 CARD8 1 0.28 0.22 13 4.7 87.86 23 5.39 No 39 0.66 No 0 0 No -22 0.54 No 48 55.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 48752451 - NM_001184902 CARD8 1 0.59 0.44 24 2.35 84.41 29 6.64 Yes 33 1.09 Yes 0 0 No -28 0.75 Yes 42 88.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48752889 - NM_001184902 CARD8 1 0.31 0.22 14 -9.75 70.34 29 6.46 Yes 16 0.9 Yes 23 0.91 Yes -28 0.94 Yes 42 90.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48752922 - NM_001184902 CARD8 1 0.26 0.17 12 5.51 79.36 18 3.98 No 5 0.71 No 26 0.86 Yes -17 0.56 No 52 71.41 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 48759613 + NR_040599 CARD8-AS1 1 1.04 0.28 16 -4.28 0 9 3.87 No 39 1.1 Yes 0 0 No -34 0.78 Yes 36 89.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48759681 + NR_040599 CARD8-AS1 1 0.99 0.28 17 6.14 88.68 22 6.48 Yes 9 1.13 Yes 0 0 No -21 0.94 Yes 49 93.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203807610 + NM_001322428 CARF 1 1.41 0.14 10 5.81 87.82 22 4.69 No 13 1.39 Yes 0 0 No -21 0.96 Yes 49 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203807241 + NM_001322428 CARF 1 1.44 0.13 8 4.84 93.02 17 5.35 No 0 0.08 No 0 0 No -22 0.67 Yes 48 80.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 203807610 + NM_001322428 CARF 1 3.76 0.4 23 5.81 87.82 22 4.69 No 13 1.39 Yes 0 0 No -21 0.96 Yes 49 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203809532 + NM_001322428 CARF 1 4.03 0.17 9 10.16 87.56 30 5.66 Yes 47 0.84 Yes 0 0 No -29 0.72 Yes 41 73.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203816580 + NM_001322428 CARF 1 1.37 0.19 11 3.01 0 25 5.1 No 12 0.64 No 0 0 No -32 0.71 Yes 38 90.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 203835611 + NM_001322428 CARF 1 3.55 0.47 28 2.53 69.36 52 7.79 Yes 39 0.72 No 0 0 No -43 0.65 No 27 82.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 203838204 + NM_001322428 CARF 1 3.09 0.29 17 1.57 60.2 52 7.38 Yes 39 1.09 Yes 30 0.5 Yes -51 0.53 No 19 85.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 8954076 - NM_014316 CARHSP1 1 1.23 0.24 14 6.83 79.89 41 4.9 No 41 0.26 No 31 0.23 Yes -31 0.54 No 31 71.88 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 11014260 + NM_199141 CARM1 1 0.11 0.11 7 11.47 91.35 28 5.83 Yes 25 1.89 Yes 0 0 No -27 0.43 No 43 63.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 11019225 + NM_199141 CARM1 1 0.79 2.56 63 10.63 85.59 28 5.71 Yes 15 0.43 No 27 0.84 Yes -27 0.61 No 43 65.47 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 11024606 + NM_199141 CARM1 1 0.15 0.42 20 0.8 67.66 31 6.73 Yes 33 -2.81 No 0 0 No -30 0.81 Yes 44 38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 11028941 + NM_199141 CARM1 1 0.1 0.26 15 7.17 88.99 15 4.81 No 2 1.4 Yes 0 0 No -26 0.61 No 44 57.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 11030508 + NM_199141 CARM1 1 0.1 0.26 13 10.86 86.65 40 6.78 Yes NA NA NA 29 0.78 Yes -29 0.69 Yes 41 70.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11031134 + NM_199141 CARM1 1 0.09 0.25 16 8.48 75 20 5.66 Yes 7 0.2 No 0 0 No -19 0.77 Yes 51 68.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 11031338 + NM_199141 CARM1 1 0.36 0.76 38 1.14 0 32 6.56 Yes 19 0.68 No 27 0.88 Yes -31 0.88 Yes 39 90.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 25430678 + NM_001173977 CARMIL1 1 0.42 0.17 12 10.29 95.65 26 5.39 No 26 0.43 No 0 0 No -25 0.66 Yes 45 63.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 25479335 + NM_001173977 CARMIL1 1 0.18 0.11 8 7.51 92.11 23 4.62 No 62 1.64 Yes 29 0.81 Yes -29 0.84 Yes 41 94.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 25556822 + NM_001173977 CARMIL1 1 0.21 0.11 8 4.41 81.07 25 5.54 No 76 0.26 No 0 0 No -24 0.68 Yes 46 68.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 25612964 + NM_001173977 CARMIL1 1 2.27 0.54 24 3.57 84.3 17 3.67 No 4 0.47 No 24 0.47 Yes -29 0.62 No 39 32.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67682304 + NM_001013838 CARMIL2 1 1.04 0.42 24 -1.97 0 24 5.91 Yes 72 -2.37 No 0 0 No -23 0.72 Yes 47 77.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67683322 + NM_001013838 CARMIL2 1 0.16 0.13 7 3.94 75.77 15 4.95 No 2 2.33 Yes 29 0.6 Yes -18 0.53 No 42 72.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 67683766 + NM_001013838 CARMIL2 1 1.08 0.4 23 2.13 70.66 36 8.19 Yes 64 -1.67 No 0 0 No -33 0.76 Yes 37 80.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67685110 + NM_001013838 CARMIL2 1 0.52 0.29 14 -2.27 67.2 16 4.81 No 27 1.51 Yes 0 0 No -39 0.42 No 50 32.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67690096 + NM_001013838 CARMIL2 1 0.73 0.56 27 8.65 75.88 27 5.74 Yes -3 1.07 Yes 26 0.43 Yes -31 0.31 No 44 52.33 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 67690736 + NM_001013838 CARMIL2 1 19.25 6.85 71 5.67 87.96 23 4.79 No 40 1.6 Yes 22 0.93 Yes -22 0.85 Yes 48 76.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67691123 + NM_001013838 CARMIL2 1 0.37 0.21 10 -2.36 61.29 17 4.64 No 68 -4.85 No 26 0.71 Yes -16 0.6 No 54 49.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67690958 + NM_001013838 CARMIL2 1 0.65 0.31 15 -0.57 68.47 22 4.69 No 9 0.45 No 0 0 No -21 0.92 Yes 49 79.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67691123 + NM_001013838 CARMIL2 1 1.42 0.86 39 -2.36 61.29 17 4.64 No 68 -4.85 No 26 0.71 Yes -16 0.6 No 54 49.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 77613647 - NM_001320497 CARNMT1 1 0.42 0.36 16 4.04 75.02 33 6.8 Yes 56 0.89 Yes 0 0 No -32 0.78 Yes 38 84.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 77620896 - NM_001320497 CARNMT1 1 0.63 0.31 16 11.16 97.18 28 6.04 Yes 5 0.37 No 0 0 No -26 0.36 No 44 34.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 77631722 - NM_001320497 CARNMT1 1 1.14 1.17 46 11.58 95.35 24 5.39 No 11 0.82 Yes 0 0 No -23 0.84 Yes 47 87.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 3023405 - NR_036542 CARS 1 1.16 1.21 46 8.63 74.31 71 8.93 Yes 40 0.1 No 31 0.63 Yes -58 0.7 Yes 12 64.94 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 3039771 - NR_036542 CARS 1 1.48 1.57 51 -12.67 0 15 3.87 No 69 0.21 No 26 0.59 Yes -37 0.75 Yes 22 40.6 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 3047462 - NR_036542 CARS 1 0.13 0.18 12 8.42 74.01 43 6.56 Yes 30 1.1 Yes 0 0 No -29 0.56 No 41 58.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 3050061 - NR_036542 CARS 1 0.18 0.25 15 3.69 77.32 36 4.53 No 75 -2.72 No 0 0 No -26 0.54 No 35 56.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 3061812 - NR_036542 CARS 1 0.58 0.44 24 7.05 75.4 23 5.02 No 20 0.66 No 23 0.92 Yes -23 0.87 Yes 47 83.13 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 3063561 - NR_036542 CARS 1 1.3 0.14 9 -2.82 56.27 70 8.19 Yes 57 0.37 No 33 0.44 Yes -33 0.75 Yes 21 48.28 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr13 111293951 - NM_024537 CARS2 1 1.54 2.39 61 1.91 0 21 6.09 Yes 8 1.31 Yes 0 0 No -33 0.75 Yes 37 77.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 111294527 - NM_024537 CARS2 1 0.14 0.19 12 5.96 90.14 28 4.69 No 32 1.52 Yes 0 0 No -27 0.58 No 43 77.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 111296530 - NM_024537 CARS2 1 18.58 16.93 72 4.87 87.96 30 6.83 Yes 34 0.26 No 29 0.89 Yes -33 0.81 Yes 37 86.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111296951 - NM_024537 CARS2 1 0.29 0.26 13 1.42 69.58 32 5.57 Yes 75 -3.27 No 0 0 No -26 0.69 Yes 46 59.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 111296954 - NM_024537 CARS2 1 1.51 1.42 53 9.61 76.99 29 5.29 No 72 -3.27 No 23 0.62 Yes -23 0.71 Yes 49 71.34 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111298979 - NM_024537 CARS2 1 0.55 0.67 30 1.58 71.52 28 5.54 No 37 1.26 Yes 27 0.77 Yes -33 0.51 No 43 15.94 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 111301785 - NM_024537 CARS2 1 0.62 1.11 39 10.25 84.46 53 5.12 No 40 0.38 No 0 0 No -28 0.61 No 42 75.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 111312616 - NM_024537 CARS2 1 0.08 0.15 8 -2.83 0 17 4.12 No 23 0.23 No 0 0 No -35 0.44 No 47 55.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111312624 - NM_024537 CARS2 1 0.06 0.1 7 -4.06 76.03 16 4.16 No -4 0.31 No 0 0 No -27 0.47 No 43 72.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 111315398 - NM_024537 CARS2 1 1.1 1.67 48 8.2 84.23 26 5.66 Yes 69 2.24 Yes 25 0.79 Yes -25 0.78 Yes 45 83.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111315421 - NM_024537 CARS2 1 0.11 0.19 10 5.82 73.32 59 11.05 Yes 46 2.25 Yes 25 0.79 Yes -27 0.94 Yes 43 89.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111316394 - NM_024537 CARS2 1 1.57 3.22 62 7.63 77.81 39 5.16 No 26 0.5 No 0 0 No -39 0.62 No 36 59.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111319276 - NM_024537 CARS2 1 3.71 7.46 72 2.21 69.62 49 7.32 Yes 36 1.17 Yes 0 0 No -51 0.74 Yes 19 80.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 111336197 - NM_024537 CARS2 1 0.18 0.21 12 6.72 86.46 27 6.16 Yes 14 0.25 No 0 0 No -35 0.44 No 39 61.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111336468 - NM_024537 CARS2 1 0.16 0.21 10 5.63 81.66 20 5.1 No 7 0.01 No 0 0 No -19 0.6 No 51 55.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111337946 - NM_024537 CARS2 1 0.89 1.06 31 8.88 80.17 28 6.37 Yes 15 0.88 Yes 0 0 No -27 0.56 No 43 64.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 111339548 - NM_024537 CARS2 1 0.2 0.26 16 7.72 90.2 15 4.56 No 2 0.76 No 0 0 No -25 0.65 No 45 55.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111347085 - NM_024537 CARS2 1 0.13 0.22 14 7.53 77.13 28 5.74 Yes 28 1.25 Yes 0 0 No -27 0.77 Yes 43 86.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 111348565 - NM_024537 CARS2 1 2.47 4.44 67 6.76 86.75 31 6 Yes 75 0.63 No 0 0 No -19 0.39 No 51 33.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111350315 - NM_024537 CARS2 1 0.94 1.58 55 9.52 85.16 27 5.29 No 35 1.24 Yes 26 0.71 Yes -26 0.46 No 45 64.54 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 111351184 - NM_024537 CARS2 1 0.13 0.21 14 4.33 83.01 29 7.45 Yes 16 1.54 Yes 0 0 No -28 0.79 Yes 42 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 111351187 - NM_024537 CARS2 1 0.64 1.15 36 8.09 85.02 26 7.26 Yes 13 1.57 Yes 0 0 No -25 0.78 Yes 45 91.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 111357913 - NM_024537 CARS2 1 0.87 1.01 43 0.08 0 9 3.87 No 7 0.96 Yes 0 0 No -32 0.42 No 38 65.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38298306 + NM_007359 CASC3 1 0.59 0.99 45 7.48 91.79 32 4.95 No 14 -1.53 No 0 0 No -26 0.82 Yes 44 63.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 38309211 + NM_007359 CASC3 1 0.1 0.17 8 4.48 85.86 17 6.86 Yes 4 1.26 Yes 0 0 No -29 0.49 No 54 60.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38317990 + NM_007359 CASC3 1 0.28 0.49 28 5.09 81.19 25 5.44 No 67 0.71 No 0 0 No -24 0.49 No 46 51.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 38321670 + NM_007359 CASC3 1 0.08 0.11 8 3.29 81.8 24 5.83 Yes 35 0.89 Yes 0 0 No -23 0.74 Yes 47 80.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38323623 + NM_007359 CASC3 1 0.51 0.78 35 10.09 89.55 23 6.45 Yes 10 0.77 No 25 0.81 Yes -22 0.46 No 48 58.97 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 38324497 + NM_007359 CASC3 1 0.26 0.39 19 5.77 84.94 28 3.67 No 71 1.26 Yes 0 0 No -25 0.49 No 50 44.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38324581 + NM_007359 CASC3 1 0.36 0.56 27 8.66 96.23 16 6.28 Yes 3 0.86 Yes 0 0 No -19 0.41 No 45 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38326704 + NM_007359 CASC3 1 0.17 0.18 13 -2.59 0 45 7.81 Yes 32 1.66 Yes 0 0 No -44 0.95 Yes 26 97.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38326704 + NM_007359 CASC3 1 17.59 18.49 72 -2.59 0 45 7.81 Yes 32 1.66 Yes 0 0 No -44 0.95 Yes 26 97.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38326707 + NM_007359 CASC3 1 0.84 0.92 33 -11.9 0 11 3.87 No 35 1.64 Yes 0 0 No -47 0.95 Yes 23 97.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44585807 + NM_138423 CASC4 1 0.07 0.14 9 5.09 0 14 4.47 No 1 1.13 Yes 0 0 No -29 0.69 Yes 41 89.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44589451 + NM_138423 CASC4 1 0.1 0.22 14 8.26 90.47 40 6.56 Yes 27 2.3 Yes 0 0 No -39 0.9 Yes 31 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44599431 + NM_138423 CASC4 1 0.05 0.11 7 2.3 84.41 37 5.92 Yes 13 1.83 Yes 0 0 No -25 0.65 No 45 91.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 44599435 + NM_138423 CASC4 1 0.28 0.61 32 3.01 0 41 6.13 Yes 17 1.8 Yes 0 0 No -29 0.65 No 41 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 44611604 + NM_138423 CASC4 1 0.11 0.26 16 5.74 85.79 29 7.74 Yes 16 1.76 Yes 0 0 No -28 0.87 Yes 42 92.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44621273 + NM_138423 CASC4 1 0.07 0.18 9 -1.21 0 12 4.24 No -1 0.87 Yes 0 0 No -21 0.53 No 49 87.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 44630407 + NM_138423 CASC4 1 0.13 0.32 19 -6.74 0 19 3.77 No 38 0.72 No 27 0.61 Yes -34 0.35 No 26 45.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 44631581 + NM_138423 CASC4 1 0.25 0.74 33 4.72 90.11 27 5.2 No 46 0.65 No 0 0 No -26 0.6 No 50 53.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 44637197 + NM_138423 CASC4 1 0.2 0.61 32 7.48 95.08 28 7.68 Yes 15 1.48 Yes 0 0 No -27 0.95 Yes 43 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44638072 + NM_138423 CASC4 1 0.15 0.44 23 9.45 88.91 53 5.84 Yes 40 1.27 Yes 37 0.74 Yes -37 0.88 Yes 33 93.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 44639404 + NM_138423 CASC4 1 0.06 0.21 13 7.59 85.64 17 5.54 No 4 1.52 Yes 0 0 No -33 0.39 No 50 36.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 44640740 + NM_138423 CASC4 1 0.09 0.25 16 9.7 82.46 17 5.66 Yes 4 1.71 Yes 23 0.44 Yes -23 0.36 No 47 61.94 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 44641765 + NM_138423 CASC4 1 0.07 0.19 11 5.67 78.95 25 5.46 No 53 -4.08 No 0 0 No -24 0.45 No 46 57.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 44647124 + NM_138423 CASC4 1 0.05 0.14 9 9.56 92.19 31 5.72 Yes 74 -2.75 No 0 0 No -30 0.82 Yes 40 90.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44690528 + NM_138423 CASC4 1 0.14 0.24 14 1.26 0 46 5.72 Yes 76 1.39 Yes 0 0 No -32 0.67 Yes 38 78.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44706711 + NM_138423 CASC4 1 0.27 0.29 17 7.67 94.82 19 6 Yes 75 0.89 Yes 18 0.54 Yes -33 0.44 No 52 56.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 94152156 + NM_022900 CASD1 1 2.02 1.22 47 6.73 85.02 22 5.74 Yes 76 1.18 Yes 0 0 No -21 0.88 Yes 49 91.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 94162500 + NM_022900 CASD1 1 1.32 0.79 44 -0.36 63.02 34 5.31 No 36 0.62 No 22 0.56 Yes -20 0.53 No 50 59.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 94166583 + NM_022900 CASD1 1 0.43 0.19 10 7.62 77.93 23 5.22 No 36 0.89 Yes 0 0 No -28 0.43 No 42 68.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 94168667 + NM_022900 CASD1 1 0.24 0.14 9 6.72 77.44 40 6.19 Yes 52 0.5 No 0 0 No -32 0.66 Yes 38 87.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 94172264 + NM_022900 CASD1 1 0.73 0.43 20 5.94 76.97 28 4.28 No 72 0.62 No 0 0 No -24 0.25 No 42 32.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 94180653 + NM_022900 CASD1 1 0.95 0.58 27 1.06 0 41 7.11 Yes 59 2.03 Yes 0 0 No -40 0.33 No 30 38.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 41495023 - NM_003688 CASK 1 0.18 0.14 10 10.7 88.8 21 4.86 No 8 1.93 Yes 20 0.88 Yes -20 0.58 No 50 73.74 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 41530005 - NM_003688 CASK 1 0.26 0.18 12 11.89 95.65 22 5.25 No 9 1.03 Yes 0 0 No -30 0.5 No 40 68.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 41602990 - NM_003688 CASK 1 12.35 12.17 72 7 78.38 37 7.13 Yes 10 1.08 Yes 22 0.93 Yes -22 0.55 No 30 40 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 41626133 - NM_003688 CASK 1 0.53 0.35 21 9.39 92.91 30 6.9 Yes 17 1.25 Yes 0 0 No -36 0.63 No 34 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 41661703 - NM_003688 CASK 1 0.44 0.47 24 11.76 97 24 5.48 No 25 1.17 Yes 0 0 No -23 0.68 Yes 47 74.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 41774056 - NM_003688 CASK 1 0.21 0.15 11 9.96 88.29 15 5.99 Yes 2 1.39 Yes 0 0 No -20 0.75 Yes 50 55.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 104896328 - NM_001257118 CASP1 1 0.1 0.11 7 9.48 89.86 51 11.27 Yes 38 1.65 Yes 20 0.53 Yes -20 0.48 No 20 64.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 104897063 - NM_001257118 CASP1 1 0.07 0.11 7 2.65 82.1 24 5.1 No 19 0.97 Yes 0 0 No -31 0.75 Yes 39 86.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 104897721 - NM_001257118 CASP1 1 0.24 0.11 7 9.4 96.82 29 5.39 No 28 0.1 No 22 0.55 Yes -22 0.73 Yes 48 75.44 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 104905116 - NM_001257118 CASP1 1 1.68 0.99 35 1.27 76.4 20 5.16 No 63 0.01 No 19 0.9 Yes -19 0.87 Yes 51 67.97 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 202050741 + NM_032974 CASP10 1 1.92 0.47 27 8.27 91.04 25 5.2 No 16 0.71 No 0 0 No -28 0.64 No 46 82.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 202065096 + NM_032974 CASP10 1 1.69 0.36 23 4.16 89.6 24 5.54 No 51 1.32 Yes 0 0 No -24 0.41 No 35 42.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 202065165 + NM_032974 CASP10 1 27.31 6.51 71 10.35 93.29 26 5.29 No 64 1.67 Yes 25 0.63 Yes -26 0.85 Yes 44 91.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 202065193 + NM_032974 CASP10 1 2.03 0.47 26 4.43 83.77 31 5.74 Yes 55 0.82 Yes 0 0 No -27 0.64 No 43 65.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 202068455 + NM_032974 CASP10 1 19.9 4.93 67 9.69 97.58 28 8.51 Yes 38 1.79 Yes 0 0 No -27 0.93 Yes 43 94.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 202073012 + NM_032974 CASP10 1 3.84 0.83 37 0.44 66.36 61 6.66 Yes 14 1.3 Yes 0 0 No -42 0.63 No 28 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 142990239 + NM_001224 CASP2 1 0.17 0.25 12 10.97 93.99 52 7.27 Yes 39 2.1 Yes 33 0.03 Yes -51 0.82 Yes 19 92.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 142991799 + NM_001224 CASP2 1 0.12 0.13 9 -3.01 67.02 25 4.93 No 53 0.02 No 0 0 No -37 0.5 No 33 24.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 185556569 - NM_004346 CASP3 1 0.26 0.85 35 -5.05 0 30 5.9 Yes 17 0.51 No 0 0 No -28 0.3 No 40 44.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 185567028 - NM_004346 CASP3 1 0.29 0.18 11 6.43 81.27 29 4.51 No 31 1.06 Yes 0 0 No -23 0.65 No 47 83.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 185569083 - NM_004346 CASP3 1 0.7 0.49 24 9.77 91.13 30 6.42 Yes 17 0.49 No 0 0 No -29 0.55 No 41 59.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 104822791 - NM_001225 CASP4 1 0.66 1.38 47 10.07 81.28 29 5.92 Yes 55 -2.76 No 28 0.4 Yes -31 0.53 No 45 78.56 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 104825726 - NM_001225 CASP4 1 4.25 5.15 70 1.25 73.75 28 5.68 Yes 68 -4.22 No 0 0 No -27 0.68 Yes 43 76.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 104827423 - NM_001225 CASP4 1 3.09 3.83 66 7.14 84.56 24 6 Yes 11 1.89 Yes 0 0 No -23 0.9 Yes 47 95.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 110618905 - NM_001226 CASP6 1 0.28 0.14 10 3.44 80.89 25 5.2 No 34 0.69 No 0 0 No -24 0.9 Yes 46 92.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 110623939 - NM_001226 CASP6 1 0.84 0.36 20 10.21 95.54 33 6.24 Yes 48 -1.97 No 0 0 No -29 0.49 No 41 67.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 115485575 + NM_001267058 CASP7 1 1.25 1.35 45 4.33 84.41 30 4.11 No 54 0.45 No 29 0.64 Yes -26 0.66 No 41 56.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 115490190 + NM_001267058 CASP7 1 0.12 0.11 8 6.42 78.82 30 6.94 Yes 17 1.9 Yes 0 0 No -29 0.96 Yes 41 96.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 202104992 + NM_033358 CASP8 1 98.55 15.88 72 11.24 79.37 48 7.48 Yes 35 1.74 Yes 35 0.51 Yes -47 0.92 Yes 23 96.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 90540948 + NM_012115 CASP8AP2 1 6.19 0.13 8 4.39 83.24 34 6.18 Yes 24 1.39 Yes 0 0 No -36 0.6 No 34 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 90540955 + NM_012115 CASP8AP2 1 6.73 0.22 14 -2.16 0 10 4 No 31 1.38 Yes 0 0 No -43 0.63 No 27 84.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 90541982 + NM_012115 CASP8AP2 1 8.36 0.18 11 8.92 87.35 43 6.45 Yes 74 0.83 Yes 0 0 No -33 0.92 Yes 37 95.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 90556580 + NM_012115 CASP8AP2 1 0.25 0.11 8 6.3 86.87 20 7.1 Yes 7 1.25 Yes 0 0 No -19 0.89 Yes 51 84.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 90563101 + NM_012115 CASP8AP2 1 0.61 0.22 14 10.41 86.48 27 5.14 No 14 1.15 Yes 0 0 No -26 0.63 No 44 74.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 90571134 + NM_012115 CASP8AP2 1 6.7 2.83 68 11.99 90.69 25 6.24 Yes 12 1.29 Yes 0 0 No -24 0.7 Yes 45 71.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 15820481 - NR_102732 CASP9 1 0.83 0.24 12 -9.04 86.13 20 4.97 No 23 0.72 No 0 0 No -26 0.58 No 50 71.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 15823803 - NR_102732 CASP9 1 1.27 0.19 11 12.22 88.27 44 8.86 Yes 60 0.97 Yes 0 0 No -43 0.76 Yes 27 84.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 15827276 - NR_102732 CASP9 1 3.34 0.43 24 8.51 84.64 23 5.26 No 51 2.1 Yes 0 0 No -22 0.89 Yes 48 91.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 96073556 + NM_001042443 CAST 1 0.13 0.35 21 3.07 0 35 7.96 Yes 22 0.66 No 0 0 No -28 0.34 No 36 56.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 96076449 + NM_001042443 CAST 1 0.06 0.13 8 -13.25 0 15 7.34 Yes 30 0.87 Yes 0 0 No -29 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 96089766 + NM_001042443 CAST 1 0.21 0.4 20 -0.7 74.58 40 6.43 Yes 27 1.4 Yes 0 0 No -28 0.75 Yes 31 69.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 96090364 + NM_001042443 CAST 1 0.05 0.13 8 -10.47 80.39 32 7.33 Yes 19 0.52 No 0 0 No -31 0.8 Yes 39 95.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 96108494 + NM_001042443 CAST 1 0.12 0.24 15 8.36 93.89 27 7.05 Yes 14 0.49 No 0 0 No -26 0.62 No 44 78.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 10746595 - NM_001079843 CASZ1 1 0.75 0.13 8 9.63 88.24 26 6.08 Yes 13 1.33 Yes 0 0 No -25 0.89 Yes 45 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 34474656 + NM_001752 CAT 1 0.39 0.61 28 10.14 89.37 23 5.38 No 49 0.86 Yes 0 0 No -26 0.65 No 14 54.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 34479322 + NM_001752 CAT 1 0.24 0.42 26 7.79 82.61 34 6.46 Yes 10 0.22 No 0 0 No -30 0.64 No 45 63.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 32206253 + NM_005093 CBFA2T2 1 1.34 0.14 8 5.78 78.17 34 6.24 Yes 28 0.12 No 33 0.38 Yes -25 0.47 No 45 55.42 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 32211578 + NM_005093 CBFA2T2 1 3.5 0.5 30 3.72 65.9 41 5.11 No 28 0.66 No 25 0.73 Yes -40 0.85 Yes 30 93.97 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 32219194 + NM_005093 CBFA2T2 1 1.07 0.19 9 7.49 77.77 37 6.93 Yes 24 1.54 Yes 0 0 No -36 0.89 Yes 34 95.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 32220299 + NM_005093 CBFA2T2 1 0.93 0.17 10 10.6 94.37 25 6.71 Yes 12 1.62 Yes 0 0 No -31 0.63 No 39 78.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 32225493 + NM_005093 CBFA2T2 1 2.6 0.32 15 4.58 84.41 26 6.87 Yes 13 1.7 Yes 0 0 No -25 0.95 Yes 45 94.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 32226615 + NM_005093 CBFA2T2 1 1.57 0.19 12 8.66 86.9 28 4.75 No 38 0.85 Yes 0 0 No -27 0.87 Yes 43 79.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 32228149 + NM_005093 CBFA2T2 1 22.53 2.51 65 1.49 79.97 27 6.01 Yes 3 0.55 No 23 0.79 Yes -21 0.67 Yes 49 84.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88947557 - NM_005187 CBFA2T3 1 0.72 0.24 16 9.36 90.1 29 5.39 No 60 -2.27 No 19 0.83 Yes -28 0.57 No 42 57.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67070557 + NM_022845 CBFB 1 0.06 0.1 7 5.73 90.52 21 5 No 32 1.41 Yes 0 0 No -20 0.56 No 26 68.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67070577 + NM_022845 CBFB 1 0.25 0.49 25 7.22 86.63 15 5.34 No 52 1.43 Yes 0 0 No -22 0.36 No 46 58.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67070846 + NM_022845 CBFB 1 0.06 0.11 8 5.5 90.92 45 6.11 Yes 13 0.74 No 0 0 No -25 0.5 No 45 52.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67074103 + NM_022845 CBFB 1 1.35 2.58 63 13.08 92.3 30 5.48 No 17 0.77 Yes 0 0 No -29 0.59 No 41 66.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67080054 + NM_022845 CBFB 1 0.05 0.11 7 6.03 89.33 27 5.29 No 58 1.29 Yes 0 0 No -26 0.69 Yes 49 30.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 67103430 + NM_022845 CBFB 1 0.04 0.11 7 -2.09 52.72 19 6.16 Yes 73 -5.96 No 0 0 No -18 0.81 Yes 52 55.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 67106390 + NM_022845 CBFB 1 0.85 2.03 61 11.46 95.65 43 7.36 Yes 60 1.13 Yes 0 0 No -42 0.73 Yes 28 74.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67113526 + NM_022845 CBFB 1 0.24 0.51 23 2.14 71.27 29 7.02 Yes 16 1.38 Yes 0 0 No -28 0.92 Yes 42 77.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67116118 + NM_022845 CBFB 1 0.85 2.19 63 2.31 84.46 31 5.71 Yes 32 -2.43 No 0 0 No -30 0.72 Yes 40 66.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 67126269 + NM_022845 CBFB 1 0.17 0.17 11 9.91 89.52 27 4.9 No 68 1.34 Yes 0 0 No -27 0.85 Yes 43 87.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67133604 + NM_022845 CBFB 1 0.18 0.19 13 9.19 95.52 26 5.48 No 41 0.3 No 0 0 No -25 0.86 Yes 45 94.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 119145561 + NM_005188 CBL 1 0.49 0.51 28 7.48 90.65 23 5.39 No 23 1.28 Yes 0 0 No -22 0.81 Yes 48 82.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 119149646 + NM_005188 CBL 1 0.52 0.42 25 9.41 88.2 32 5.86 Yes 63 0.85 Yes 0 0 No -26 0.69 Yes 49 59.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 105378099 - NM_001321813 CBLB 1 0.16 0.1 7 5.03 67.13 49 6.15 Yes 36 0.47 No 31 0.55 Yes -24 0.56 No 46 73.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 105389891 - NM_001321813 CBLB 1 0.75 0.42 22 9.74 92.65 26 5.97 Yes 50 1.64 Yes 0 0 No -25 0.6 No 45 58.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 105391307 - NM_001321813 CBLB 1 0.21 0.1 7 7.73 78.7 19 6.62 Yes 6 1.47 Yes 0 0 No -23 0.53 No 47 72.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 105434146 - NM_001321813 CBLB 1 0.49 0.35 22 1.86 0 18 4.58 No 5 1.03 Yes 0 0 No -17 0.75 Yes 53 89.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 105459500 - NM_001321813 CBLB 1 0.29 0.17 10 3.3 60.16 24 6.06 Yes 64 1.03 Yes 29 0.66 Yes -23 0.65 No 40 56.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 105481245 - NM_001321813 CBLB 1 6.43 3.47 69 9.41 91.35 21 5.84 Yes 8 0.75 No 0 0 No -28 0.53 No 42 83.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 105493215 - NM_001321813 CBLB 1 0.2 0.11 7 9.36 88.8 12 5.39 No 38 0.37 No 0 0 No -26 0.75 Yes 44 79.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 107385681 + NR_024199 CBLL1 1 0.27 0.11 7 4.36 72.74 40 6.17 Yes 27 0.17 No 0 0 No -22 0.31 No 36 56.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 107387866 + NR_024199 CBLL1 1 0.44 0.21 14 6.38 75.34 31 7 Yes 69 -4.28 No 0 0 No -30 0.77 Yes 40 76.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 169919437 - NM_032783 CBR4 1 29.85 18.81 72 2.11 66.23 30 6.9 Yes 17 1.27 Yes 0 0 No -29 0.7 Yes 41 61.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 169927066 - NM_032783 CBR4 1 4.85 4.14 70 0.49 71.73 48 7.21 Yes 72 0.49 No 26 0.64 Yes -40 0.54 No 28 47.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 169930206 - NM_032783 CBR4 1 1.63 0.86 36 -3.78 87.48 43 8.43 Yes 30 1.6 Yes 29 0.7 Yes -29 0.65 No 28 89.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 169930208 - NM_032783 CBR4 1 1.45 0.83 34 -1.01 84.41 41 8.31 Yes 28 1.61 Yes 29 0.7 Yes -27 0.64 No 30 89.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 121570 - NM_001145355 CBWD1 1 0.54 0.19 14 2.2 0 38 4.28 No 49 0.47 No 0 0 No -32 0.76 Yes 41 68.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 151428 - NM_001145355 CBWD1 1 28.28 3.71 67 -2.61 0 37 6.56 Yes 29 1.19 Yes 36 0.89 Yes -36 0.67 Yes 34 79.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 160141 - NM_001145355 CBWD1 1 0.14 0.21 12 6.59 89.95 29 9.16 Yes 35 1.4 Yes 28 0.7 Yes -28 0.79 Yes 42 79.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 164032 - NM_001145355 CBWD1 1 0.1 0.1 7 0.93 0 9 3.87 No 48 0.32 No 0 0 No -27 0.71 Yes 38 47.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 164449 - NM_001145355 CBWD1 1 0.55 0.54 25 10.86 84.51 41 6.84 Yes 17 0.45 No 0 0 No -25 0.52 No 45 64.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 114210304 + NM_001330340 CBWD2 1 0.11 0.13 9 10.86 84.51 41 6.84 Yes 17 0.45 No 0 0 No -25 0.52 No 45 64.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 114223609 + NM_001330340 CBWD2 1 0.28 0.1 7 3.62 83.19 20 6.15 Yes 58 -5.33 No 0 0 No -19 0.63 No 51 60.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 114224059 + NM_001330340 CBWD2 1 22.6 6.57 71 7.24 83.47 32 7.09 Yes 19 1.82 Yes 0 0 No -31 0.85 Yes 39 91.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 114226745 + NM_001330340 CBWD2 1 0.79 0.25 13 2.56 0 53 7.3 Yes 40 0.74 No 0 0 No -43 0.37 No 27 55.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 70871836 + NM_001291821 CBWD3 1 80.46 16.51 72 0.64 0 40 5.05 No 42 0.34 No 21 0.6 Yes -21 0.71 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 70457144 - NM_001024916 CBWD5 1 16.37 1.1 42 8.16 86.09 23 4.9 No 10 1.81 Yes 22 0.95 Yes -22 0.96 Yes 48 98.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 70459033 - NM_001024916 CBWD5 1 2.03 0.13 9 1.31 0 47 7.19 Yes 34 0.61 No 37 0.7 Yes -37 0.44 No 33 77.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 70461715 - NM_001024916 CBWD5 1 285.94 16.49 72 7.24 83.47 32 7.09 Yes 19 1.82 Yes 31 0.89 Yes -31 0.85 Yes 39 91.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 70462166 - NM_001024916 CBWD5 1 16.14 0.96 42 3.62 83.19 20 6.15 Yes 65 -5.48 No 0 0 No -19 0.63 No 51 60.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 70462419 - NM_001024916 CBWD5 1 16.25 0.88 41 -2.42 0 43 7.06 Yes 35 1.32 Yes 0 0 No -42 0.65 No 28 79.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 70465795 - NM_001024916 CBWD5 1 188.02 37.4 72 9.82 84.47 27 8.26 Yes 70 1.33 Yes 27 0.91 Yes -27 0.57 No 43 66.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 70472660 - NM_001024916 CBWD5 1 810.22 101.1 72 8.63 88.7 20 5.42 No 7 1.32 Yes 25 0.59 Yes -32 0.44 No 51 46.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 70475490 - NM_001024916 CBWD5 1 1.84 0.68 36 10.86 84.51 41 6.84 Yes 17 0.45 No 25 0.52 Yes -25 0.52 No 45 64.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 70488918 - NM_001024916 CBWD5 1 15.05 2.74 68 9.21 83.41 31 5.59 Yes 55 0.64 No 21 0.46 Yes -31 0.6 No 39 40.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 69215520 - NM_001085457 CBWD6 1 0.67 0.19 12 3.62 98.19 23 4.9 No 10 0.71 No 0 0 No -22 0.95 Yes 48 94.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 46154401 - NM_001127228 CBX1 1 1.2 1.81 58 4.28 82.21 34 7.11 Yes 21 2.31 Yes 0 0 No -33 0.89 Yes 37 94.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46173202 - NM_001127228 CBX1 1 0.09 0.15 9 5.03 80.92 21 5.2 No 23 1.23 Yes 23 0.66 Yes -23 0.68 Yes 47 85.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 26242160 + NM_016587 CBX3 1 0.11 0.54 30 -3.91 59.09 39 5.68 Yes 69 0.66 No 0 0 No -39 0.59 No 31 86.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 26242596 + NM_016587 CBX3 1 0.23 1.28 50 -1.8 0 9 3.87 No 14 0.9 Yes 0 0 No -32 0.61 No 38 71.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 26246227 + NM_016587 CBX3 1 0.02 0.22 12 11.6 85.83 30 7.04 Yes 17 1.6 Yes 0 0 No -29 0.87 Yes 41 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 26248085 + NM_016587 CBX3 1 2.21 25.49 72 5.47 88.61 25 4.79 No 8 0.5 No 24 0.91 Yes -24 0.9 Yes 46 93.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 26249559 + NM_016587 CBX3 1 0.27 4.18 69 6.3 87.79 16 4.63 No 3 0.41 No 24 0.91 Yes -24 0.71 Yes 46 63.86 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 26249617 + NM_016587 CBX3 1 0.03 0.42 23 2.96 74.15 42 7.35 Yes 61 0.36 No 0 0 No -23 0.71 Yes 34 59.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 26251269 + NM_016587 CBX3 1 0.06 0.94 46 -9.99 0 22 5.29 No 62 0.41 No 23 0.68 Yes -27 0.38 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 26251706 + NM_016587 CBX3 1 0.06 0.53 27 -4.19 0 29 8.13 Yes 20 1.33 Yes 0 0 No -33 0.56 No 37 53.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 77809320 - NM_003655 CBX4 1 2.15 1.53 53 8.76 79.19 22 6.08 Yes 9 2.58 Yes 21 0.92 Yes -21 0.88 Yes 49 89.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54635685 - NM_001127321 CBX5 1 0.03 0.22 12 -2.07 0 23 5.69 Yes 34 1.07 Yes 0 0 No -28 0.56 No 42 57.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 54635711 - NM_001127321 CBX5 1 0.08 0.44 18 8.29 75.11 21 6.08 Yes 8 1.12 Yes 23 0.71 Yes -32 0.68 Yes 50 85.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54639997 - NM_001127321 CBX5 1 1.34 9.08 72 5.17 85.21 29 6.48 Yes 16 2.01 Yes 0 0 No -29 0.85 Yes 41 80.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 54639997 - NM_001127321 CBX5 1 0.02 0.13 9 5.17 85.21 29 6.48 Yes 16 2.01 Yes 0 0 No -29 0.85 Yes 41 80.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 54643425 - NM_001127321 CBX5 1 0.03 0.25 11 8.78 88.28 22 4.51 No 68 0.26 No 0 0 No -28 0.6 No 42 63.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 54646757 - NM_001127321 CBX5 1 0.07 0.25 18 3.01 0 36 7.26 Yes 23 2.14 Yes 0 0 No -35 0.81 Yes 35 82.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 54649336 - NM_001127321 CBX5 1 0.04 0.15 9 3.01 0 40 7.37 Yes 51 0.8 Yes 0 0 No -29 0.59 No 33 56.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39263207 - NM_001303494 CBX6 1 1003.51 335.06 72 14.16 87.03 32 6.13 Yes 19 0.83 Yes 31 0.76 Yes -31 0.73 Yes 39 66.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 39263207 - NM_001303494 CBX6 1 0.55 0.19 13 14.16 87.03 32 6.13 Yes 19 0.83 Yes 31 0.76 Yes -31 0.73 Yes 39 66.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 39266349 - NM_001303494 CBX6 1 0.58 0.19 11 8.5 84.58 30 5.48 No 17 0.66 No 0 0 No -25 0.73 Yes 45 91.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39266675 - NM_001303494 CBX6 1 2.68 1 41 8.42 79.79 25 5.57 Yes 12 0.75 No 0 0 No -24 0.93 Yes 46 94.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39534755 - NM_001346744 CBX7 1 1.18 0.1 7 10.05 78.58 26 5.57 Yes 34 0.3 No 0 0 No -24 0.46 No 51 36.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 39545188 - NM_001346744 CBX7 1 6.97 1.03 46 10.43 94.91 23 5 No 10 0.05 No 0 0 No -22 0.77 Yes 48 59.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 39066771 + NM_001002880 CBY1 1 7.18 2.08 61 2.81 62.91 59 6.2 Yes 74 0.64 No 24 0.7 Yes -29 0.4 No 12 64.75 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 39067080 + NM_001002880 CBY1 1 1.59 0.33 17 -3.59 0 9 3.87 No 16 1.07 Yes 0 0 No -28 0.76 Yes 42 84.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14020663 + NM_017721 CC2D1A 1 0.27 0.14 9 6.49 82.85 13 6.08 Yes 40 1.73 Yes 0 0 No -52 0.78 Yes 18 57.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 14023304 + NM_017721 CC2D1A 1 0.17 0.11 7 5.44 82.29 24 7.05 Yes 11 1.23 Yes 30 0.82 Yes -23 0.89 Yes 47 63.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 14024249 + NM_017721 CC2D1A 1 0.58 0.33 23 1.66 74.72 36 4.63 No 35 1.7 Yes 0 0 No -35 0.63 No 44 34.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 14030611 + NM_017721 CC2D1A 1 0.51 0.19 14 2.15 66.76 33 6.18 Yes 3 0.64 No 24 0.91 Yes -32 0.62 No 55 49.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 14031372 + NM_017721 CC2D1A 1 12.93 2.63 63 6.23 84.43 27 7.21 Yes 14 1.98 Yes 0 0 No -26 0.91 Yes 44 93.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14037347 + NM_017721 CC2D1A 1 0.16 0.13 7 2.08 80.89 28 5.2 No 57 1.04 Yes 0 0 No -27 0.65 No 23 16.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 14038939 + NM_017721 CC2D1A 1 6.73 2.29 62 4.58 81.94 29 5.74 Yes 16 1.03 Yes 25 0.97 Yes -28 0.96 Yes 42 97.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 52818933 - NM_001330585 CC2D1B 1 0.3 0.11 7 9.13 90.31 24 6.7 Yes 51 1.01 Yes 28 0.96 Yes -23 0.74 Yes 47 73.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 52820127 - NM_001330585 CC2D1B 1 4.54 3.31 70 5.8 86.23 28 5.39 No 46 -2.52 No 27 0.88 Yes -27 0.92 Yes 43 89.97 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 52821116 - NM_001330585 CC2D1B 1 0.51 0.29 11 -2.81 0 16 3.87 No 17 1.93 Yes 0 0 No -29 0.62 No 28 77.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 52822631 - NM_001330585 CC2D1B 1 0.63 0.39 20 10.87 83.09 40 6.56 Yes 27 -0.05 No 0 0 No -39 0.85 Yes 31 79.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 52822819 - NM_001330585 CC2D1B 1 2.1 1 45 -6.36 71.35 22 5.62 Yes 9 0.92 Yes 22 0.66 Yes -21 0.56 No 49 69.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 52823589 - NM_001330585 CC2D1B 1 17.99 6.14 72 7.95 81.19 30 5.53 No 20 0.03 No 24 0.67 Yes -29 0.64 No 46 50.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52825499 - NM_001330585 CC2D1B 1 0.65 0.31 18 2.22 0 13 4.36 No 27 0.56 No 29 0.84 Yes -39 0.48 No 36 49.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52825509 - NM_001330585 CC2D1B 1 5.97 3.19 70 4.73 80.73 30 5.57 Yes 69 0.62 No 29 0.84 Yes -29 0.61 No 46 63.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52825919 - NM_001330585 CC2D1B 1 0.51 0.24 15 4.58 73.5 28 5.83 Yes 15 -1.25 No 18 0.68 Yes -27 0.77 Yes 43 63.4 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 70492503 + NR_104262 CCAR1 1 0.08 0.21 12 7.39 78.22 41 6.7 Yes 48 0.43 No 0 0 No -26 0.76 Yes 44 83.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 70500391 + NR_104262 CCAR1 1 0.36 0.6 31 4.92 0 9 3.87 No 30 2.11 Yes 0 0 No -46 0.73 Yes 24 65.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 70502136 + NR_104262 CCAR1 1 0.05 0.11 8 0.95 0 30 5.64 Yes 6 0.73 No 0 0 No -30 0.47 No 40 71.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 70507136 + NR_104262 CCAR1 1 0.14 0.44 25 -5.52 0 14 3.74 No 39 1.18 Yes 0 0 No -47 0.8 Yes 23 94.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70514435 + NR_104262 CCAR1 1 1.29 3.82 70 7.07 73.82 37 6.08 Yes 8 0.78 Yes 28 0.91 Yes -30 0.65 No 40 70.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 70516029 + NR_104262 CCAR1 1 4486.85 246.19 72 9.07 88.39 39 5.85 Yes 70 -2.63 No 24 0.86 Yes -24 0.6 No 47 64.6 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 70516282 + NR_104262 CCAR1 1 3.96 0.22 13 8.7 88.94 30 6.58 Yes 17 2.22 Yes 29 0.92 Yes -29 0.74 Yes 41 87.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 70528776 + NR_104262 CCAR1 1 0.07 0.11 8 1.93 80.97 15 4.39 No 2 1.7 Yes 0 0 No -24 0.84 Yes 46 69.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 70533010 + NR_104262 CCAR1 1 0.05 0.17 10 8.41 88.48 23 5 No -4 1.06 Yes 0 0 No -22 0.76 Yes 48 83.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70533670 + NR_104262 CCAR1 1 0.13 0.38 20 9.93 95.02 36 8.13 Yes 23 1.09 Yes 0 0 No -35 0.7 Yes 35 84.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70534708 + NR_104262 CCAR1 1 0.49 1.43 50 10.6 93.23 32 5.01 No 31 0.43 No 0 0 No -29 0.74 Yes 41 84.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 70536027 + NR_104262 CCAR1 1 0.05 0.14 8 8.99 85.05 43 9.36 Yes 30 2.05 Yes 0 0 No -42 0.85 Yes 28 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70537112 + NR_104262 CCAR1 1 0.04 0.11 8 7.3 81.11 30 5.88 Yes 12 0.15 No 0 0 No -29 0.68 Yes 41 65.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 70547259 + NR_104262 CCAR1 1 0.04 0.13 7 2.17 80.79 26 4.71 No 7 0.48 No 0 0 No -25 0.86 Yes 45 85.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 22463867 + NM_021174 CCAR2 1 0.06 0.11 8 9.28 94.77 31 5.96 Yes 66 1.47 Yes 0 0 No -30 0.81 Yes 40 79.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22464748 + NM_021174 CCAR2 1 0.08 0.22 13 6.7 80.18 24 5.48 No 52 1.22 Yes 23 0.75 Yes -23 0.59 No 47 64.74 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 22471565 + NM_021174 CCAR2 1 0.08 0.22 8 6.95 69.76 57 7.92 Yes 12 0.71 No 30 0.89 Yes -24 0.83 Yes 46 79.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 22471736 + NM_021174 CCAR2 1 0.08 0.21 15 3.44 69.68 30 5.66 Yes 17 1.6 Yes 0 0 No -29 0.77 Yes 41 68.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 22472818 + NM_021174 CCAR2 1 0.54 0.63 27 8.24 77.44 19 4.28 No 41 1.87 Yes 0 0 No -24 0.92 Yes 46 96.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22473182 + NM_021174 CCAR2 1 0.06 0.13 7 3.1 78.51 18 4.69 No 17 0.39 No 19 0.93 Yes -29 0.3 No 49 42.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 22475211 + NM_021174 CCAR2 1 3.25 5.82 71 5.9 91.79 22 7.35 Yes 9 -0.2 No 22 0.48 Yes -21 0.81 Yes 49 70.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 22476114 + NM_021174 CCAR2 1 0.18 0.36 21 4.38 81.96 38 6.06 Yes 48 1.13 Yes 23 0.95 Yes -21 0.35 No 62 42.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 22477024 + NM_021174 CCAR2 1 0.17 0.25 14 6.94 83.23 24 5.1 No 56 0.17 No 0 0 No -50 0.35 No 51 59.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 22477516 + NM_021174 CCAR2 1 0.62 0.99 38 12.1 86.22 23 6.4 Yes 10 2.24 Yes 0 0 No -22 0.81 Yes 48 93.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56160123 + NM_013301 CCDC106 1 10.42 1.25 46 6.65 84.18 26 5.66 Yes 13 0.46 No 25 0.94 Yes -25 0.95 Yes 45 95.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 56160311 + NM_013301 CCDC106 1 12.73 1.72 50 8.2 88.22 17 6.17 Yes 4 1.35 Yes 24 0.27 Yes -24 0.51 No 54 74.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 56160575 + NM_013301 CCDC106 1 0.35 0.15 10 2.85 0 28 7.62 Yes 15 1.34 Yes 0 0 No -27 0.89 Yes 43 87.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56160775 + NM_013301 CCDC106 1 1.43 0.96 37 0.09 75.29 35 6.99 Yes 22 1.78 Yes 0 0 No -34 0.9 Yes 36 94.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56163800 + NM_013301 CCDC106 1 0.23 0.11 8 -0.37 0 35 7.74 Yes 22 1.71 Yes 0 0 No -34 0.95 Yes 36 95.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 131097275 - NM_001321119 CCDC115 1 0.69 0.42 22 2.79 66.86 18 5.29 No 70 -2.64 No 0 0 No -17 0.47 No 45 58.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 131097336 - NM_001321119 CCDC115 1 8 4.74 72 -1.3 67.46 22 4.99 No 44 -3.92 No 21 0.92 Yes -21 0.83 Yes 49 63.83 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 29179050 + NM_001284265 CCDC117 1 0.1 0.18 13 0.15 84.41 25 5.1 No 12 0.65 No 0 0 No -24 0.92 Yes 46 91.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29182057 + NM_001284265 CCDC117 1 0.19 0.46 21 -0.73 76.53 46 4.67 No 46 0.94 Yes 26 0.73 Yes -25 0.8 Yes 32 77.01 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29184426 + NM_001284265 CCDC117 1 0.12 0.28 17 7.68 94.83 17 4.78 No 14 0.06 No 0 0 No -22 0.61 No 48 72.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 46963925 - NR_102269 CCDC12 1 0.05 0.11 7 10.26 86.3 32 5.46 No 62 -2.37 No 0 0 No -30 0.58 No 40 42.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 46968650 - NR_102269 CCDC12 1 0.1 0.14 8 7 88.77 23 5.29 No 55 -3.11 No 0 0 No -21 0.73 Yes 49 71.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 46978201 - NR_102269 CCDC12 1 0.11 0.14 9 10.17 80.06 38 4.76 No 73 1.05 Yes 0 0 No -27 0.49 No 36 60.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 46980339 - NR_102269 CCDC12 1 0.23 0.29 17 4.8 83.28 31 5.07 No 11 0.9 Yes 0 0 No -23 0.64 No 47 66.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 44413225 - NM_144974 CCDC122 1 34.96 1.71 53 4.16 75.29 32 8.48 Yes 19 1.56 Yes 0 0 No -31 0.9 Yes 39 93.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 44430759 - NM_144974 CCDC122 1 4.92 0.22 16 3.01 0 39 5.98 Yes 26 0.59 No 38 0.45 Yes -38 0.92 Yes 32 92.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18053203 + NM_138442 CCDC124 1 0.17 0.43 17 4.98 82.67 21 5.2 No 8 0.57 No 0 0 No -20 0.71 Yes 50 69.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 68581914 - NM_001297697 CCDC125 1 1.26 0.24 14 10.55 92.93 15 5.66 Yes 35 1.53 Yes 0 0 No -25 0.56 No 40 52.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68588175 - NM_001297697 CCDC125 1 3.38 0.31 20 2.04 75.88 24 3.44 No 32 1.25 Yes 0 0 No -23 0.57 No 26 57.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68605721 - NM_001297697 CCDC125 1 0.66 0.31 19 8.69 93.32 31 4.29 No 5 0.73 No 0 0 No -23 0.56 No 47 48.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 68609734 - NM_001297697 CCDC125 1 0.83 0.24 14 10.23 85.72 22 4.36 No 70 -5.27 No 20 0.7 Yes -20 0.93 Yes 50 93.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 68609874 - NM_001297697 CCDC125 1 15.02 3.67 72 5.9 71.34 28 5.66 Yes 15 1.53 Yes 27 0.85 Yes -27 0.86 Yes 43 95.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 68610283 - NM_001297697 CCDC125 1 1.02 0.28 13 8.59 88.56 37 8.16 Yes 9 0.46 No 0 0 No -22 0.57 No 33 38.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 23637590 + NM_138771 CCDC126 1 1.75 0.26 14 -1.08 0 29 7.62 Yes 16 1.71 Yes 0 0 No -28 0.95 Yes 42 96.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 23641489 + NM_138771 CCDC126 1 63.42 4.83 70 8.56 85.86 22 7.28 Yes 9 1.36 Yes 21 0.8 Yes -21 0.93 Yes 49 94.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 23643704 + NM_138771 CCDC126 1 76.17 5.9 71 10.91 89.48 30 4.85 No 5 0.14 No 29 0.76 Yes -29 0.57 No 41 51.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 23661684 + NM_138771 CCDC126 1 2.48 0.57 27 8.85 88.97 32 7.25 Yes 19 1.13 Yes 0 0 No -31 0.88 Yes 39 85.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 23668188 + NM_138771 CCDC126 1 1.53 0.31 19 5.13 86.3 25 5.1 No 12 0.63 No 0 0 No -24 0.84 Yes 46 84.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 216808 - NM_145265 CCDC127 1 0.94 0.42 25 7.99 94.93 30 5.89 Yes 63 0.32 No 0 0 No -29 0.78 Yes 41 78.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 217495 - NM_145265 CCDC127 1 0.68 0.11 7 2.7 74.66 26 6.06 Yes 13 0.7 No 0 0 No -25 0.74 Yes 45 84.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 13872304 + NM_001320567 CCDC130 1 3.3 1.14 43 6.77 73.99 46 7.94 Yes -4 0.71 No 19 0.64 Yes -34 0.73 Yes 36 86.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 42197002 + NM_024821 CCDC134 1 8.13 4.75 67 7.46 88.27 31 6 Yes 18 0.34 No 0 0 No -30 0.79 Yes 40 77.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 42205859 + NM_024821 CCDC134 1 0.18 0.17 9 -2.97 73.47 22 4.71 No 47 -4.3 No 25 0.69 Yes -43 0.52 No 27 43.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 42205877 + NM_024821 CCDC134 1 0.12 0.13 8 -6.09 0 26 3.99 No 13 1.14 Yes 25 0.69 Yes -25 0.37 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 42209253 + NM_024821 CCDC134 1 0.89 0.51 27 3.37 78.26 31 5.66 Yes 26 -0.51 No 19 0.94 Yes -22 0.75 Yes 48 42.79 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 42219411 + NM_024821 CCDC134 1 0.12 0.11 7 7.41 91.2 18 5.13 No 5 1.27 Yes 0 0 No -21 0.67 Yes 49 69.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 79637031 + NM_199287 CCDC137 1 0.26 0.21 14 12.93 90.36 27 5.74 Yes 55 -2.87 No 26 0.4 Yes -31 0.6 No 44 64.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79637259 + NM_199287 CCDC137 1 1.05 0.85 41 3.69 0 26 5.66 Yes 48 1.21 Yes 20 0.82 Yes -25 0.91 Yes 45 86.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79637563 + NM_199287 CCDC137 1 1.71 1.36 52 6.2 82.71 15 6.24 Yes 2 0.2 No 0 0 No -28 0.53 No 53 42.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 109408814 + NR_130121 CCDC138 1 0.5 0.28 14 -5.1 0 63 11.12 Yes 50 1.35 Yes 0 0 No -62 0.67 Yes 47 12.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 109421347 + NR_130121 CCDC138 1 8.1 3.22 69 8.32 84.22 28 5.63 Yes 65 0.62 No 24 0.5 Yes -25 0.58 No 40 78.09 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 109441834 + NR_130121 CCDC138 1 0.32 0.15 10 10.03 91.85 26 5.55 No 69 1.2 Yes 0 0 No -25 0.92 Yes 45 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 109443209 + NR_130121 CCDC138 1 0.23 0.13 8 6.1 79.97 69 8.46 Yes 56 0.82 Yes 0 0 No -25 0.53 No 45 52.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 109489906 + NR_130121 CCDC138 1 4.73 0.33 20 9.48 89.23 31 5.32 No 58 1.14 Yes 24 0.59 Yes -30 0.52 No 46 38.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 109489906 + NR_130121 CCDC138 1 1.76 0.17 9 9.48 89.23 31 5.32 No 58 1.14 Yes 24 0.59 Yes -30 0.52 No 46 38.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 109467090 + NR_130121 CCDC138 1 1.78 0.64 31 5.87 83.88 18 7 Yes 5 1.46 Yes 0 0 No -26 0.31 No 53 73.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 109467093 + NR_130121 CCDC138 1 1.48 0.42 25 4.89 80.92 21 7.21 Yes 8 1.45 Yes 0 0 No -20 0.61 No 50 82.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 109470001 + NR_130121 CCDC138 1 0.38 0.13 9 -2.94 84.41 27 5.55 No 14 1.45 Yes 0 0 No -26 0.75 Yes 44 84.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 109489906 + NR_130121 CCDC138 1 11.98 1.01 46 9.48 89.23 31 5.32 No 58 1.14 Yes 24 0.59 Yes -30 0.52 No 46 38.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 109475175 + NR_130121 CCDC138 1 1.64 0.17 8 11.16 88.27 34 7.3 Yes 21 1.78 Yes 0 0 No -33 0.81 Yes 37 94.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 109481952 + NR_130121 CCDC138 1 8.74 0.71 32 8.07 83.82 31 8.39 Yes 5 1.18 Yes 0 0 No -30 0.85 Yes 40 92.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 109489906 + NR_130121 CCDC138 1 318.84 23.69 72 9.48 89.23 31 5.32 No 58 1.14 Yes 24 0.59 Yes -30 0.52 No 46 38.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 123633980 - NM_001308317 CCDC14 1 1.33 0.85 36 5.17 76.74 22 6.82 Yes 9 1.12 Yes 28 0.65 Yes -28 0.51 No 42 55.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 123634137 - NM_001308317 CCDC14 1 5.1 3.24 64 4.63 80.38 26 5.8 Yes 13 0.36 No 25 0.44 Yes -21 0.43 No 47 47.11 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 123634137 - NM_001308317 CCDC14 1 0.18 0.13 7 4.63 80.38 26 5.8 Yes 13 0.36 No 25 0.44 Yes -21 0.43 No 47 47.11 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 123634220 - NM_001308317 CCDC14 1 0.29 0.18 13 10.11 84.13 22 6.86 Yes 47 0.06 No 0 0 No -31 0.74 Yes 39 74.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 123650360 - NM_001308317 CCDC14 1 1.36 1.03 40 6.12 91.46 19 4.79 No 6 0.88 Yes 0 0 No -19 0.84 Yes 51 69.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 123650604 - NM_001308317 CCDC14 1 0.61 0.43 24 8.07 85.1 30 5.09 No 68 0.24 No 0 0 No -29 0.46 No 41 38.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 123652599 - NM_001308317 CCDC14 1 0.22 0.24 12 1.34 0 28 5.4 No 15 0.58 No 0 0 No -27 0.91 Yes 43 95.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 123662143 - NM_001308317 CCDC14 1 0.47 0.42 23 5.43 77.84 34 7.26 Yes 4 1.01 Yes 0 0 No -33 0.91 Yes 37 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 123672018 - NM_001308317 CCDC14 1 2.33 1.06 46 6.32 89.67 20 5 No 7 0.2 No 0 0 No -19 0.61 No 47 65.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 123672018 - NM_001308317 CCDC14 1 0.61 0.31 17 6.32 89.67 20 5 No 7 0.2 No 0 0 No -19 0.61 No 47 65.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 123672156 - NM_001308317 CCDC14 1 0.26 0.11 7 4.56 83.61 23 4.99 No 46 0.69 No 0 0 No -22 0.62 No 48 77.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 179765016 - NM_173648 CCDC141 1 1.62 0.18 9 4.16 80.43 29 6.16 Yes 61 0.68 No 0 0 No -29 0.52 No 41 54.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 179862148 - NM_173648 CCDC141 1 0.77 0.1 7 10.07 93.97 20 5.83 Yes 7 1.07 Yes 0 0 No -19 0.65 No 51 69.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 179896924 - NM_173648 CCDC141 1 1.15 0.21 11 10.48 88.95 49 7.3 Yes 36 1 Yes 0 0 No -48 0.86 Yes 22 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 179910619 - NM_173648 CCDC141 1 2.03 0.22 12 8.95 75.82 25 5.32 No 12 0.79 Yes 0 0 No -24 0.76 Yes 46 83.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74702236 - NM_032779 CCDC142 1 0.83 0.1 7 4.54 0 10 4 No 72 -3.31 No 0 0 No -26 0.58 No 44 58.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 124860990 + NM_025004 CCDC15 1 3.47 0.24 13 9.06 83.85 26 5.52 No 39 1.38 Yes 0 0 No -25 0.58 No 45 72.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 124881153 + NM_025004 CCDC15 1 1.04 0.17 11 6.05 83.5 46 3.87 No 72 1.37 Yes 0 0 No -34 0.35 No 39 38.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 197523518 + NM_001080539 CCDC150 1 1.47 0.15 9 2.1 77.3 34 5.81 Yes 59 0.28 No 0 0 No -29 0.95 Yes 41 92.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 197540870 + NM_001080539 CCDC150 1 1.2 0.11 7 -2.41 0 25 6.7 Yes 12 1.11 Yes 28 0.76 Yes -32 0.69 Yes 38 60.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 11457506 + NM_001080503 CCDC159 1 1.06 0.15 11 6.29 77.23 38 5.74 Yes 14 0.8 Yes 0 0 No -26 0.92 Yes 44 88.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11460251 + NM_001080503 CCDC159 1 3.23 0.39 19 2.59 78.36 23 5.1 No 10 0.05 No 22 0.95 Yes -22 0.86 Yes 48 90.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11460332 + NM_001080503 CCDC159 1 2.77 0.32 20 3.75 75.33 19 7.06 Yes 6 1.03 Yes 26 0.71 Yes -29 0.62 No 41 67.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 11462740 + NM_001080503 CCDC159 1 0.84 0.14 8 -7.31 0 13 4.12 No 14 1.23 Yes 0 0 No -26 0.65 No 44 63.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45965113 - NR_033297 CCDC163 1 7.95 0.26 15 4.47 88.84 33 6.63 Yes 76 -0.96 No 29 0.9 Yes -32 0.94 Yes 38 96.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 37451061 - NM_138493 CCDC167 1 0.63 1.88 55 -1.18 0 23 7.67 Yes 32 1.63 Yes 0 0 No -44 0.47 No 26 66.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 37451064 - NM_138493 CCDC167 1 0.06 0.18 10 -0.11 76.35 20 7.48 Yes 29 1.64 Yes 0 0 No -28 0.45 No 29 64.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 37451581 - NM_138493 CCDC167 1 0.06 0.19 13 0.28 61.08 23 6.14 Yes 40 1.11 Yes 0 0 No -22 0.94 Yes 48 89.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 15573778 + NM_173550 CCDC171 1 1.35 0.18 11 6.37 80.84 33 5.14 No 20 0.6 No 0 0 No -32 0.4 No 41 54.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 15587529 + NM_173550 CCDC171 1 1.32 0.13 9 3.24 71.02 28 6.4 Yes 15 0.98 Yes 0 0 No -31 0.58 No 40 63.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 15587559 + NM_173550 CCDC171 1 1.74 0.19 10 2.37 59.17 27 5.74 Yes 45 0.93 Yes 0 0 No -26 0.86 Yes 44 77.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 15782406 + NM_173550 CCDC171 1 4.18 0.25 16 7.6 93.32 61 6.52 Yes 60 0.93 Yes 0 0 No -27 0.78 Yes 43 79.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93649579 + NM_001306076 CCDC18 1 0.83 0.28 18 6.54 80.47 32 4.65 No 10 0.84 Yes 0 0 No -22 0.83 Yes 48 85.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93655735 + NM_001306076 CCDC18 1 0.64 0.36 20 10.05 90.66 49 4.87 No 70 1.43 Yes 0 0 No -23 0.62 No 36 68.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 93662672 + NM_001306076 CCDC18 1 0.73 0.29 17 2.11 81.82 23 5 No 10 0.25 No 0 0 No -22 0.76 Yes 48 69.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93666241 + NM_001306076 CCDC18 1 1.11 0.56 27 9.05 83.26 23 6.63 Yes 10 0.99 Yes 0 0 No -29 0.81 Yes 41 80.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93668593 + NM_001306076 CCDC18 1 1.5 0.64 36 7.49 76.97 33 4.31 No 41 0.43 No 0 0 No -32 0.78 Yes 38 82.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93672667 + NM_001306076 CCDC18 1 0.53 0.24 16 2.66 0 56 5.59 Yes 16 0.31 No 0 0 No -28 0.52 No 42 49.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 93674994 + NM_001306076 CCDC18 1 0.63 0.29 21 7.73 77.86 23 5.76 Yes 67 -5.47 No 0 0 No -22 0.43 No 43 77.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 93676406 + NM_001306076 CCDC18 1 8.51 3.74 70 5.69 79.91 24 3.97 No 11 0.16 No 0 0 No -24 0.6 No 46 55.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 93680299 + NM_001306076 CCDC18 1 1.62 0.46 24 5.27 78.26 29 5.65 Yes 62 1.15 Yes 28 0.73 Yes -28 0.68 Yes 42 71.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 93680299 + NM_001306076 CCDC18 1 0.64 0.18 11 5.27 78.26 29 5.65 Yes 62 1.15 Yes 28 0.73 Yes -28 0.68 Yes 42 71.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 93680299 + NM_001306076 CCDC18 1 228.35 62.79 72 5.27 78.26 29 5.65 Yes 62 1.15 Yes 28 0.73 Yes -28 0.68 Yes 42 71.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 93683278 + NM_001306076 CCDC18 1 0.46 0.21 12 4.29 74.23 15 4.79 No 2 0.22 No 20 0.75 Yes -26 0.39 No 52 62.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 93683300 + NM_001306076 CCDC18 1 0.39 0.17 11 -4.55 0 9 3.87 No 24 0.19 No 0 0 No -31 0.39 No 44 54.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 93685854 + NM_001306076 CCDC18 1 0.23 0.13 7 4.32 70.49 53 7.36 Yes 40 0.45 No 0 0 No -34 0.43 No 36 71.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 93684059 + NM_001306076 CCDC18 1 9.14 3.81 63 9.43 76.12 32 4.84 No 19 0.49 No 0 0 No -31 0.97 Yes 39 98.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93684903 + NM_001306076 CCDC18 1 0.32 0.14 10 5.61 76.26 32 5.57 Yes 19 0.39 No 0 0 No -28 0.78 Yes 42 88.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93684931 + NM_001306076 CCDC18 1 0.39 0.19 10 8.57 86.08 31 4.19 No 4 1.22 Yes 0 0 No -30 0.64 No 40 70.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 93685245 + NM_001306076 CCDC18 1 0.28 0.14 8 4.75 77.21 31 6.59 Yes 63 -3.01 No 0 0 No -22 0.68 Yes 48 71.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93685854 + NM_001306076 CCDC18 1 0.72 0.35 20 4.32 70.49 53 7.36 Yes 40 0.45 No 0 0 No -34 0.43 No 36 71.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 93686356 + NM_001306076 CCDC18 1 0.25 0.11 8 9.25 80.18 34 7.35 Yes 21 2.11 Yes 0 0 No -33 0.62 No 37 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 93687571 + NM_001306076 CCDC18 1 0.16 0.14 8 6.68 82.45 29 5.38 No 54 2.37 Yes 0 0 No -28 0.8 Yes 42 55.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 93702818 + NM_001306076 CCDC18 1 12.51 6.71 72 10.47 87.3 40 5.35 No 27 0.74 No 0 0 No -24 0.93 Yes 46 95.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93705244 + NM_001306076 CCDC18 1 0.39 0.22 11 -0.85 0 42 3.88 No 16 0.07 No 0 0 No -31 0.61 No 39 74.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 93710986 + NM_001306076 CCDC18 1 0.74 0.35 20 5.31 86.93 24 5.18 No 11 0.07 No 0 0 No -23 0.86 Yes 47 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93712376 + NM_001306076 CCDC18 1 0.6 0.22 13 -0.59 62.53 15 4.59 No 28 0.41 No 26 0.56 Yes -25 0.7 Yes 45 39.61 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 93712382 + NM_001306076 CCDC18 1 0.6 0.24 14 -5.23 0 15 3.86 No 34 0.41 No 26 0.56 Yes -31 0.42 No 60 20.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 93719454 + NM_001306076 CCDC18 1 0.89 0.42 21 8.9 91.34 28 8.08 Yes 15 1.31 Yes 0 0 No -27 0.88 Yes 43 83.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93719931 + NM_001306076 CCDC18 1 0.28 0.13 8 8.34 86.86 24 6.82 Yes 11 1.77 Yes 0 0 No -24 0.61 No 46 56.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 93731330 + NM_001306076 CCDC18 1 1.64 0.26 16 4.37 78.79 32 6.55 Yes 57 -4.29 No 0 0 No -31 0.78 Yes 39 92.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93780824 - NR_034089 CCDC18-AS1 1 9.09 0.79 32 2.24 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.65 No 51 79.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 93780827 - NR_034089 CCDC18-AS1 1 34.7 3.15 63 3.6 85.02 17 6.93 Yes 4 1.2 Yes 30 0.27 Yes -27 0.53 No 54 55.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 93780827 - NR_034089 CCDC18-AS1 1 1.87 0.13 8 3.6 85.02 17 6.93 Yes 4 1.2 Yes 30 0.27 Yes -27 0.53 No 54 55.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 93783786 - NR_034089 CCDC18-AS1 1 21.82 1.71 39 8.07 82.45 43 6.66 Yes 45 0.27 No 24 0.77 Yes -24 0.72 Yes 46 89.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 93789149 - NR_034089 CCDC18-AS1 1 2.52 0.17 11 5 80.72 24 6.04 Yes 11 0.34 No 0 0 No -28 0.82 Yes 42 82.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 115910976 - NR_135815 CCDC186 1 0.18 0.1 7 0.09 0 29 6.83 Yes 5 0.41 No 0 0 No -28 0.64 No 42 62.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 115920026 - NR_135815 CCDC186 1 0.39 0.14 10 5.62 88.76 34 6.11 Yes 50 0.36 No 0 0 No -26 0.57 No 45 81.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 113761689 - NM_020817 CCDC191 1 4.64 0.21 13 0.78 0 41 5.72 Yes 15 0.62 No 23 0.89 Yes -28 0.79 Yes 42 88.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 49093557 + NM_014008 CCDC22 1 0.27 0.13 9 2.08 0 29 5.49 No 28 1.6 Yes 0 0 No -28 0.67 Yes 42 70.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 49097478 + NM_014008 CCDC22 1 1.14 0.61 34 7.7 88.74 29 5.28 No 5 1.56 Yes 0 0 No -28 0.45 No 42 56.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 49098463 + NM_014008 CCDC22 1 0.17 0.1 7 7.14 76.26 16 5.57 Yes 40 -1.58 No 22 0.88 Yes -21 0.34 No 46 39.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 49098531 + NM_014008 CCDC22 1 0.2 0.13 9 3.99 82.81 20 5.07 No 60 0.97 Yes 22 0.63 Yes -22 0.55 No 48 64.99 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 49099107 + NM_014008 CCDC22 1 0.25 0.14 10 7.58 76.35 19 4.59 No 53 1.42 Yes 0 0 No -21 0.64 No 49 73.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 49099788 + NM_014008 CCDC22 1 0.26 0.13 9 4.44 83.8 20 5.01 No 46 1.89 Yes 0 0 No -24 0.58 No 46 38.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 49104655 + NM_014008 CCDC22 1 1.01 0.43 26 -3.4 0 25 7.48 Yes 45 -3.51 No 0 0 No -24 0.79 Yes 46 63.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 49105951 + NM_014008 CCDC22 1 0.29 0.17 9 -2.35 76.47 12 4.7 No -1 0.68 No 29 0.62 Yes -26 0.77 Yes 59 46.01 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 27619682 - NM_018246 CCDC25 1 0.12 0.17 11 4.31 71.76 46 6.71 Yes 75 0.8 Yes 0 0 No -42 0.59 No 30 63.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 27619975 - NM_018246 CCDC25 1 0.15 0.19 10 -14.2 0 41 6.61 Yes 70 1.66 Yes 0 0 No -40 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 27619988 - NM_018246 CCDC25 1 0.07 0.1 7 2.82 0 28 5.57 Yes 57 1.67 Yes 39 0.6 Yes -27 0.72 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 27622051 - NM_018246 CCDC25 1 0.46 0.63 28 1.48 77.54 28 5.06 No 61 -3.5 No 27 0.9 Yes -27 0.91 Yes 43 94.56 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 27627492 - NM_018246 CCDC25 1 0.2 0.18 12 3.47 81.54 22 7.28 Yes 9 1.17 Yes 0 0 No -21 0.85 Yes 49 90.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 139114243 + NM_015439 CCDC28A 1 0.22 0.15 9 8.41 85.44 83 8.61 Yes 1 1.71 Yes 0 0 No -22 0.58 No 48 55.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 139114131 + NM_015439 CCDC28A 1 0.4 0.28 16 -6.5 0 14 3.87 No 53 1.24 Yes 0 0 No -33 0.5 No 57 44.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 139114287 + NM_015439 CCDC28A 1 0.22 0.15 11 4.14 74.88 17 5.17 No 45 1.73 Yes 0 0 No -21 0.57 No 54 76.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 32669484 + NM_001301011 CCDC28B 1 0.17 0.4 23 -2.31 0 50 7.72 Yes 37 1.99 Yes 0 0 No -28 0.79 Yes 42 64.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 27360573 - NM_030771 CCDC34 1 0.2 0.29 14 1.24 0 18 4.36 No 16 0.89 Yes 0 0 No -28 0.51 No 42 73.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 42756359 - NM_144609 CCDC43 1 0.14 0.19 8 -12.47 55.58 36 5.91 Yes 61 1.7 Yes 0 0 No -17 0.68 Yes 53 53.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 42756364 - NM_144609 CCDC43 1 0.15 0.19 10 -8 0 31 5.48 No 56 1.71 Yes 0 0 No -12 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 42759757 - NM_144609 CCDC43 1 0.27 0.39 23 10.15 89.4 44 6.73 Yes 31 2.12 Yes 0 0 No -29 0.84 Yes 41 84.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42766564 - NM_144609 CCDC43 1 0.25 0.26 16 9.27 82.77 31 8.03 Yes 18 1.32 Yes 0 0 No -30 0.85 Yes 40 90.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 61830428 - NM_020198 CCDC47 1 0.05 0.17 10 8.11 90.62 28 4.29 No 4 0.74 No 0 0 No -28 0.84 Yes 42 89.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 61838727 - NM_020198 CCDC47 1 0.08 0.24 13 -4.37 0 13 4.36 No 13 1.16 Yes 23 0.86 Yes -25 0.53 No 45 67.62 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 61842257 - NM_020198 CCDC47 1 0.11 0.38 22 -7.78 0 9 2.77 No 63 1.21 Yes 0 0 No -49 0.92 Yes 21 85.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 61843541 - NM_020198 CCDC47 1 0.16 0.24 14 6.61 88.38 17 4.64 No 4 0.46 No 0 0 No -40 0.59 No 30 83.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 61850224 - NM_020198 CCDC47 1 1 1.53 50 8.5 89.73 33 7.12 Yes 20 0.55 No 32 0.46 Yes -32 0.65 No 38 79.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 61850327 - NM_020198 CCDC47 1 0.43 0.63 27 4.17 0 27 5.29 No 14 1.67 Yes 0 0 No -26 0.91 Yes 44 94.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 61850332 - NM_020198 CCDC47 1 0.44 0.61 30 3.49 76.33 22 4.82 No 9 1.69 Yes 0 0 No -21 0.93 Yes 49 95.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 191097449 + NM_178335 CCDC50 1 1.71 0.18 10 9.01 92.25 17 3.96 No 51 0.48 No 0 0 No -19 0.57 No 48 57.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 191104472 + NM_178335 CCDC50 1 0.05 0.22 12 3.6 89 22 5 No 73 -3.71 No 0 0 No -21 0.68 Yes 52 82.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 191109487 + NM_178335 CCDC50 1 0.06 0.18 10 -0.92 0 11 4.12 No 35 0.04 No 31 0.81 Yes -19 0.28 No 60 39.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 48475387 - NM_001256964 CCDC51 1 1.25 0.63 30 10.18 83.07 27 5.74 Yes 14 0.4 No 26 0.91 Yes -26 0.87 Yes 44 87.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48476421 - NM_001256964 CCDC51 1 5.16 1.17 46 -2.76 0 23 5.02 No 13 -1.54 No 0 0 No -22 0.8 Yes 48 65.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 48476426 - NM_001256964 CCDC51 1 79.61 18.56 72 0.25 0 18 4.51 No 8 -1.21 No 20 0.76 Yes -17 0.76 Yes 50 69.56 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 80118743 - NM_198082 CCDC57 1 5.92 0.39 20 3.01 0 41 9.79 Yes 28 1.29 Yes 0 0 No -40 0.93 Yes 30 91.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80121267 - NM_198082 CCDC57 1 9.85 0.69 29 9.43 93.7 25 5.2 No 32 0.69 No 24 0.5 Yes -27 0.36 No 46 39.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 80154973 - NM_198082 CCDC57 1 2.4 0.25 16 8.4 89.81 23 4.93 No 43 0 No 0 0 No -22 0.73 Yes 48 85.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 122078675 - NM_001308326 CCDC58 1 0.43 1.26 37 11.44 89.4 43 6.63 Yes 30 0.4 No 35 0.15 Yes -42 0.27 No 31 34.74 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 122084314 - NM_001308326 CCDC58 1 0.81 1.71 62 7.15 77.57 34 5.1 No 11 0.37 No 23 0.6 Yes -30 0.3 No 47 45.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 122084481 - NM_001308326 CCDC58 1 0.09 0.19 13 11.75 85.89 30 3.89 No 17 0.76 No 29 0.78 Yes -29 0.62 No 41 66.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 122085315 - NM_001308326 CCDC58 1 0.12 0.22 14 6.86 82.94 13 5.2 No 61 0.13 No 0 0 No -23 0.29 No 47 21.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 122085397 - NM_001308326 CCDC58 1 0.06 0.17 10 5.55 81.6 26 4.62 No 35 0.56 No 0 0 No -25 0.9 Yes 45 88.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 122085400 - NM_001308326 CCDC58 1 0.09 0.21 12 1.68 75.55 23 4.37 No 32 0.57 No 0 0 No -22 0.91 Yes 48 88.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 122087205 - NM_001308326 CCDC58 1 0.07 0.21 13 2.64 72.87 45 7 Yes 32 0.32 No 41 0.44 Yes -21 0.77 Yes 49 70.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 82747114 - NR_033192 CCDC59 1 0.07 0.21 10 1.85 62.21 32 7.06 Yes 19 1.08 Yes 29 0.9 Yes -31 0.71 Yes 39 81.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 82748355 - NR_033192 CCDC59 1 0.07 0.17 8 2.73 69.7 24 5.25 No 23 1.01 Yes 0 0 No -23 0.65 No 17 69.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 61577382 - NM_005436 CCDC6 1 0.13 0.28 16 3.97 80.02 25 5.14 No 65 0.39 No 0 0 No -24 0.82 Yes 46 84.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 61591282 - NM_005436 CCDC6 1 0.08 0.15 10 7.58 87.27 28 4.22 No 5 1.14 Yes 0 0 No -31 0.85 Yes 39 91.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46504509 + NM_001267723 CCDC61 1 1.34 0.21 11 2.42 0 35 5.11 No 69 -1.73 No 0 0 No -31 0.52 No 39 72.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 46504529 + NM_001267723 CCDC61 1 1.79 0.24 14 4.84 84.95 27 5.39 No 14 0.61 No 0 0 No -26 0.78 Yes 44 61.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 46506240 + NM_001267723 CCDC61 1 4.37 0.6 26 3.15 0 12 4.24 No -1 0.37 No 25 0.35 Yes -27 0.69 Yes 43 84.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 46509821 + NM_001267723 CCDC61 1 1.27 0.64 33 -4.21 0 10 6.08 Yes -3 0.77 Yes 0 0 No -30 0.58 No 40 73.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 46511428 + NM_001267723 CCDC61 1 0.9 0.42 23 8.65 85.22 27 6.28 Yes 34 0.8 Yes 0 0 No -26 0.61 No 44 70.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 46521338 + NM_001267723 CCDC61 1 0.47 0.21 13 -0.97 63 33 7.28 Yes 20 1.91 Yes 0 0 No -32 0.92 Yes 38 90.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 56594889 + NM_001141947 CCDC66 1 20.52 4.44 71 10.01 92.4 27 5.29 No 18 0.66 No 26 0.94 Yes -26 0.8 Yes 44 82.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 56594985 + NM_001141947 CCDC66 1 0.65 0.13 9 7.86 90.4 17 4.83 No 4 0.85 Yes 0 0 No -24 0.78 Yes 46 85.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 56595284 + NM_001141947 CCDC66 1 1.07 0.25 13 8.97 96.82 18 4.84 No 12 0.85 Yes 24 0.89 Yes -24 0.77 Yes 46 81.84 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 56599161 + NM_001141947 CCDC66 1 19.38 3.71 50 5.27 80.04 25 5.95 Yes 33 0.35 No 24 0.8 Yes -24 0.7 Yes 46 68.04 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 56603340 + NM_001141947 CCDC66 1 22.22 3.47 70 5.07 82.62 27 4.91 No 40 -2.18 No 26 0.75 Yes -26 0.77 Yes 44 82.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 56603771 + NM_001141947 CCDC66 1 1.2 0.18 10 8.5 91.37 31 5.48 No 33 0.84 Yes 0 0 No -22 0.85 Yes 48 77.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 56605194 + NM_001141947 CCDC66 1 4.91 0.75 37 6.82 81.96 28 5.66 Yes 50 -1.48 No 20 0.74 Yes -27 0.62 No 43 80.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 56605454 + NM_001141947 CCDC66 1 2.52 0.43 28 6.77 90.92 28 5.29 No 48 -2.22 No 0 0 No -27 0.74 Yes 43 72.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 56606364 + NM_001141947 CCDC66 1 19.89 3.46 68 4.67 71.56 35 5.73 Yes 22 1.06 Yes 34 0.89 Yes -34 0.9 Yes 36 89.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 56627587 + NM_001141947 CCDC66 1 4 0.81 36 6.19 80.3 28 4.62 No 15 0.16 No 0 0 No -31 0.68 Yes 39 93.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 56627647 + NM_001141947 CCDC66 1 9.27 1.92 61 5.49 81.76 30 5.91 Yes -4 1.06 Yes 0 0 No -35 0.57 No 35 61.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 56632217 + NM_001141947 CCDC66 1 8.82 1.81 55 2.51 0 62 7.93 Yes 49 0.65 No 0 0 No -56 0.82 Yes 14 74.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 56647620 + NM_001141947 CCDC66 1 0.62 0.13 9 -5.98 0 50 7.44 Yes 7 0.32 No 27 0.54 Yes -24 0.84 Yes 36 59.76 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 56647634 + NM_001141947 CCDC66 1 5.52 1.25 52 0.46 81.43 24 4.8 No 21 0.34 No 27 0.54 Yes -20 0.37 No 44 45.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 56647638 + NM_001141947 CCDC66 1 0.82 0.17 8 -3.87 0 28 5.2 No 25 0.32 No 27 0.54 Yes -24 0.29 No 18 46.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 56649917 + NM_001141947 CCDC66 1 3.46 0.51 26 3.39 72.84 23 6.39 Yes 0 0.71 No 23 0.95 Yes -27 0.71 Yes 43 84.62 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 56649931 + NM_001141947 CCDC66 1 9.8 1.63 52 6.23 92.41 17 3.97 No 14 0.7 No 23 0.95 Yes -26 0.52 No 44 76.03 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 150563172 - NM_015621 CCDC69 1 0.15 0.43 28 1.8 0 31 6.48 Yes 74 -5.39 No 0 0 No -31 0.79 Yes 39 70.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 150564002 - NM_015621 CCDC69 1 0.1 0.22 9 -15.25 0 23 4.23 No 10 1.19 Yes 0 0 No -22 0.86 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 150565683 - NM_015621 CCDC69 1 0.03 0.13 8 -10.78 70.41 32 5.78 Yes 19 0.85 Yes 0 0 No -31 0.89 Yes 39 83.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 150565720 - NM_015621 CCDC69 1 0.21 0.64 34 -4.46 0 23 4.79 No -3 -1.17 No 28 0.85 Yes -22 0.84 Yes 16 27.07 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 150567759 - NM_015621 CCDC69 1 0.21 0.72 35 10.6 91.78 30 5.48 No 17 0.87 Yes 0 0 No -23 0.67 Yes 47 79.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 150576357 - NM_015621 CCDC69 1 0.14 0.43 26 8.2 91.74 35 8.4 Yes 22 0.94 Yes 0 0 No -23 0.37 No 35 56.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 150578672 - NM_015621 CCDC69 1 0.08 0.22 15 5.63 76.47 18 5.8 Yes 5 0.34 No 28 0.77 Yes -17 0.33 No 53 69.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 150584237 - NM_015621 CCDC69 1 0.07 0.25 13 1.43 79.75 61 8.44 Yes 48 0.72 No 0 0 No -23 0.43 No 10 28.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 150585034 - NM_015621 CCDC69 1 0.89 1.51 56 2.55 76.99 51 8.45 Yes 38 2.3 Yes 0 0 No -35 0.52 No 38 76.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 150594982 - NM_015621 CCDC69 1 0.08 0.14 7 9.34 80.99 33 5.77 Yes 15 1.5 Yes 0 0 No -27 0.9 Yes 43 88.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 150595248 - NM_015621 CCDC69 1 3.78 5.57 70 10.76 95.61 25 5.42 No 12 1.31 Yes 24 0.89 Yes -24 0.85 Yes 46 93.22 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 150595321 - NM_015621 CCDC69 1 0.58 0.9 40 8.02 87.62 25 7.71 Yes 12 1.59 Yes 0 0 No -24 0.65 No 42 71.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 150596969 - NM_015621 CCDC69 1 0.13 0.22 12 8.32 80.96 31 6.34 Yes -4 1.79 Yes 0 0 No -30 0.84 Yes 40 90.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 32745441 + NM_001321115 CCDC7 1 0.7 0.13 8 4.08 72.72 38 5.85 Yes 1 -1.89 No 0 0 No -37 0.83 Yes 33 83.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 32750719 + NM_001321115 CCDC7 1 1.16 0.22 13 8.42 85.05 132 11.12 Yes NA NA NA 0 0 No -25 0.5 No 45 68.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 32758312 + NM_001321115 CCDC7 1 2.5 0.15 10 4.3 85.38 26 4.65 No 0 0.28 No 0 0 No -25 0.51 No 46 57.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 32758312 + NM_001321115 CCDC7 1 15.58 0.76 34 4.3 85.38 26 4.65 No 0 0.28 No 0 0 No -25 0.51 No 46 57.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 32760064 + NM_001321115 CCDC7 1 8.86 0.67 33 5.39 82.26 28 5.2 No 15 0.59 No 0 0 No -27 0.6 No 43 78.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 32833661 + NM_001321115 CCDC7 1 3.85 0.32 17 7.72 79.12 32 5.52 No 68 0.29 No 0 0 No -20 0.39 No 46 51.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 32847435 + NM_001321115 CCDC7 1 1.08 0.11 8 9.14 85.26 41 8.28 Yes -2 1.35 Yes 0 0 No -40 0.92 Yes 30 94.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 32847557 + NM_001321115 CCDC7 1 1.12 0.1 7 0.97 0 15 4.58 No 70 -6.49 No 0 0 No -21 0.4 No 49 35.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 32847913 + NM_001321115 CCDC7 1 5.63 0.54 26 9.27 90.2 21 6.4 Yes 20 0.55 No 0 0 No -20 0.89 Yes 50 89.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 32858399 + NM_001321115 CCDC7 1 3.65 0.28 17 7.81 93.95 28 5.29 No 59 0.65 No 0 0 No -27 0.69 Yes 43 60.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 32860769 + NM_001321115 CCDC7 1 1.33 0.13 7 3.33 74.63 133 10.43 Yes 46 0.44 No 0 0 No -29 0.54 No 41 59.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 132289210 + NM_001258304 CCDC74A 1 1.71 0.13 8 4.44 72.03 14 4.9 No 1 0.74 No 20 0.94 Yes -13 0.48 No 57 68.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 132289224 + NM_001258304 CCDC74A 1 1.53 0.14 8 4.84 78.33 9 4.8 No -4 0.96 Yes 20 0.94 Yes -27 0.68 Yes 43 88.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 531587 + NM_032358 CCDC77 1 3.68 1.26 48 3.79 78.84 54 6.55 Yes 15 0.4 No 0 0 No -27 0.48 No 43 69.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 531964 + NM_032358 CCDC77 1 0.75 0.25 14 7.5 79.41 23 6.8 Yes 10 1.14 Yes 0 0 No -22 0.76 Yes 48 85.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 537926 + NM_032358 CCDC77 1 0.51 0.18 12 -3.87 76.4 23 6.6 Yes 10 0.44 No 30 0.22 Yes -22 0.54 No 48 45.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 541322 + NM_032358 CCDC77 1 0.96 0.42 22 3.92 71.87 41 6.06 Yes 35 0.6 No 0 0 No -40 0.44 No 30 74.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 542572 + NM_032358 CCDC77 1 2.39 1.06 40 2.74 71.99 35 5.37 No 46 1.11 Yes 30 0.81 Yes -30 0.7 Yes 48 64.45 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 96091784 - NM_001318736 CCDC82 1 3.77 1.93 59 8.32 82.06 31 6.63 Yes 18 2.04 Yes 0 0 No -30 0.96 Yes 40 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 96091826 - NM_001318736 CCDC82 1 0.79 0.42 23 9.23 94.37 24 6.16 Yes 11 1.63 Yes 0 0 No -32 0.65 No 38 67.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 96092262 - NM_001318736 CCDC82 1 3.14 1.85 63 4.8 74.69 28 6.95 Yes 63 -3.93 No 0 0 No -27 0.62 No 43 65.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 96119185 - NM_001318736 CCDC82 1 2.24 1.68 55 8.49 83.85 27 5.05 No 7 0.53 No 26 0.52 Yes -25 0.47 No 45 44.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 118882824 + NM_198489 CCDC84 1 11.67 2.21 63 2.61 74.23 26 6.24 Yes 13 1.34 Yes 28 0.82 Yes -25 0.9 Yes 45 90.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 118885997 + NM_198489 CCDC84 1 0.58 0.25 13 -9.03 0 15 4.43 No 28 0.37 No 18 0.61 Yes -40 0.85 Yes 30 77.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 55515492 - NM_001254943 CCDC88A 1 22.47 12.71 72 11.78 93.36 24 5.87 Yes 46 1.01 Yes 30 0.7 Yes -30 0.72 Yes 40 66.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 55522429 - NM_001254943 CCDC88A 1 0.11 0.1 7 3.84 75.8 23 4.89 No 46 0.87 Yes 0 0 No -22 0.82 Yes 48 85.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55522867 - NM_001254943 CCDC88A 1 2.16 0.19 11 -2.28 68.35 29 6.22 Yes 16 1 Yes 25 0.85 Yes -29 0.5 No 42 73.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 55523657 - NM_001254943 CCDC88A 1 1.37 1.08 46 3.13 74.5 51 5.86 Yes 38 0.95 Yes 0 0 No -25 0.5 No 20 78.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 55525171 - NM_001254943 CCDC88A 1 0.11 0.1 7 3.03 0 12 4.2 No -1 0.9 Yes 0 0 No -22 0.37 No 48 66.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 55541260 - NM_001254943 CCDC88A 1 0.07 0.1 7 7.31 84.86 38 8.89 Yes 25 1.41 Yes 22 0.72 Yes -37 0.59 No 33 79.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 55555572 - NM_001254943 CCDC88A 1 397.57 77.99 72 1.79 69.5 40 5.99 Yes 27 0.94 Yes 22 0.39 Yes -29 0.49 No 41 52.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 55556697 - NM_001254943 CCDC88A 1 0.56 0.14 7 8.83 90.88 46 6.37 Yes 33 1.39 Yes 0 0 No -45 0.82 Yes 25 95.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55570964 - NM_001254943 CCDC88A 1 0.38 0.5 22 5.09 73.26 21 5.23 No 64 0.23 No 37 0.73 Yes -20 0.7 Yes 50 73.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 55589570 - NM_001254943 CCDC88A 1 0.24 0.19 12 1.06 75.08 19 3.47 No 15 0.61 No 0 0 No -56 0.51 No 52 35.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 55603761 - NM_001254943 CCDC88A 1 0.3 0.28 16 7.15 91.34 26 5.66 Yes 30 0.33 No 0 0 No -25 0.88 Yes 45 79.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55605632 - NM_001254943 CCDC88A 1 0.11 0.1 7 5.23 71.46 77 4.97 No 64 1.04 Yes 0 0 No -44 0.47 No 19 60.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 55633295 - NM_001254943 CCDC88A 1 0.23 0.29 15 12.52 100 34 5.59 Yes 21 0.65 No 29 0.74 Yes -33 0.66 Yes 41 63.72 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 64108387 + NM_032251 CCDC88B 1 3.95 6.56 71 0.46 0 14 4.24 No 1 0.64 No 0 0 No -13 0.46 No 57 57.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64108561 + NM_032251 CCDC88B 1 0.14 0.29 19 -2.87 64.95 21 4.69 No 74 -5.04 No 25 0.95 Yes -16 0.61 No 64 28.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 64108583 + NM_032251 CCDC88B 1 0.17 0.39 21 -7.79 76.99 29 5.57 Yes 16 0.66 No 0 0 No -28 0.9 Yes 42 90.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 64109973 + NM_032251 CCDC88B 1 3.76 4.06 70 5.39 79.04 89 9.86 Yes 76 2.37 Yes 31 0.8 Yes -31 0.84 Yes 39 87.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64117029 + NM_032251 CCDC88B 1 0.53 0.67 33 -3.38 0 15 4 No 72 -4.99 No 0 0 No -23 0.54 No 47 59.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64117362 + NM_032251 CCDC88B 1 1.12 0.69 36 2.72 68.38 43 7.54 Yes 14 0.81 Yes 26 0.94 Yes -38 0.67 Yes 32 84.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64120198 + NM_032251 CCDC88B 1 0.87 0.86 35 -4.15 0 16 4.24 No 64 0.74 No 19 0.8 Yes -15 0.91 Yes 55 78.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64122977 + NM_032251 CCDC88B 1 0.07 0.11 8 7.24 71.25 29 5.97 Yes NA NA NA 0 0 No -28 0.74 Yes 49 31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 64123010 + NM_032251 CCDC88B 1 0.36 0.54 28 3.21 65.57 36 6.31 Yes NA NA NA 23 0.73 Yes -36 0.41 No 34 62.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 91744542 - NM_001080414 CCDC88C 1 0.27 0.15 9 2.48 76.39 23 4.8 No 36 1.18 Yes 0 0 No -22 0.72 Yes 48 70.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91746259 - NM_001080414 CCDC88C 1 1.19 0.64 32 8.92 81.93 21 5.33 No 15 0.84 Yes 0 0 No -33 0.41 No 43 37.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 91747616 - NM_001080414 CCDC88C 1 0.2 0.13 7 5.75 80.61 31 5.47 No 18 0.78 Yes 0 0 No -30 0.54 No 47 60.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 91747653 - NM_001080414 CCDC88C 1 5.99 3.53 69 11.4 88.61 42 6.78 Yes 64 -3.61 No 25 0.62 Yes -21 0.67 Yes 49 57.73 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 91747726 - NM_001080414 CCDC88C 1 0.64 0.36 23 6.19 77.21 24 6.38 Yes 11 -0.97 No 0 0 No -23 0.92 Yes 47 86.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 91755684 - NM_001080414 CCDC88C 1 0.14 0.13 7 -5.95 0 24 6.93 Yes -3 1.08 Yes 19 0.53 Yes -23 0.76 Yes 47 55.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 91772419 - NM_001080414 CCDC88C 1 1.1 0.56 29 3.16 80.26 17 6.73 Yes 75 1.32 Yes 0 0 No -32 0.45 No 38 58.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 91776526 - NM_001080414 CCDC88C 1 0.49 0.19 12 8.45 84.2 32 5.66 Yes 19 0.38 No 0 0 No -31 0.75 Yes 39 79.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 91787642 - NM_001080414 CCDC88C 1 0.29 0.17 11 4.17 0 10 4 No 13 1.78 Yes 0 0 No -25 0.92 Yes 45 90.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91804998 - NM_001080414 CCDC88C 1 0.62 0.24 12 12.72 93.56 29 4.98 No 60 1.34 Yes 0 0 No -21 0.52 No 49 58.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 91845445 - NM_001080414 CCDC88C 1 1.92 1.76 54 8.15 85.13 28 5.83 Yes 64 -3.31 No 0 0 No -28 0.62 No 42 87.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 91846230 - NM_001080414 CCDC88C 1 20.21 17.38 72 11.49 91.03 24 5.27 No 1 1.14 Yes 27 0.49 Yes -27 0.65 No 43 63.47 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 91848356 - NM_001080414 CCDC88C 1 0.16 0.15 10 6.36 80.39 35 6.07 Yes -3 1.01 Yes 0 0 No -35 0.56 No 36 83.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 91850896 - NM_001080414 CCDC88C 1 9.51 8.35 72 5.41 83.29 27 5.74 Yes 14 0.24 No 26 0.75 Yes -26 0.4 No 44 72.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 91873952 - NM_001080414 CCDC88C 1 0.19 0.17 11 -1.98 0 10 4 No 73 1 Yes 0 0 No -44 0.64 No 26 78.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 91873959 - NM_001080414 CCDC88C 1 0.46 0.43 23 0.04 81.43 31 6.4 Yes 66 1 Yes 0 0 No -37 0.46 No 33 73.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 91875110 - NM_001080414 CCDC88C 1 0.46 0.49 26 -2.51 79.66 31 6.48 Yes NA NA NA 29 0.67 Yes -31 0.69 Yes 46 64.1 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 47761842 + NM_015603 CCDC9 1 0.74 0.28 17 -0.92 69.66 30 5.57 Yes 34 1.1 Yes 0 0 No -29 0.79 Yes 41 31.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 82978053 - NM_001286116 CCDC90B 1 0.05 0.21 11 -5.74 0 18 4.24 No 40 1.63 Yes 0 0 No -17 0.55 No 18 49.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 82978081 - NM_001286116 CCDC90B 1 0.15 0.57 27 6.88 80.35 31 4.74 No 12 1.44 Yes 24 0.75 Yes -24 0.64 No 46 63.81 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 82984743 - NM_001286116 CCDC90B 1 0.03 0.1 7 -15.07 0 48 6.81 Yes 46 1.24 Yes 0 0 No -27 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 82984782 - NM_001286116 CCDC90B 1 0.07 0.25 16 8.35 88.27 20 6.76 Yes 39 1.43 Yes 19 0.82 Yes -19 0.84 Yes 51 93.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 82985035 - NM_001286116 CCDC90B 1 0.07 0.28 11 -13.07 0 29 7.11 Yes 16 0.91 Yes 0 0 No -28 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 82985807 - NM_001286116 CCDC90B 1 0.13 0.35 20 0.08 0 13 4.12 No 55 0.71 No 27 0.25 Yes -28 0.3 No 38 26.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 28351875 + NM_001330367 CCDC91 1 14.89 0.81 36 8.55 85.05 26 6.85 Yes 35 1.53 Yes 25 0.68 Yes -34 0.65 No 36 65.43 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 28363895 + NM_001330367 CCDC91 1 3.3 0.18 9 14.03 99.09 35 5.97 Yes 22 1.29 Yes 0 0 No -34 0.82 Yes 36 89.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 28378727 + NM_001330367 CCDC91 1 183.6 9.47 72 6.86 90.66 23 5.2 No 10 1.61 Yes 22 0.94 Yes -22 0.91 Yes 48 96.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 28408513 + NM_001330367 CCDC91 1 9.1 0.39 21 9.42 90.59 24 5.29 No 53 0.66 No 23 0.84 Yes -23 0.87 Yes 47 87.06 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 28457558 + NM_001330367 CCDC91 1 3.66 2.69 62 9.89 94.71 27 6.29 Yes 41 1 Yes 26 0.92 Yes -26 0.89 Yes 44 86.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 28459742 + NM_001330367 CCDC91 1 0.4 0.31 18 -5.66 50.13 47 8.07 Yes 21 1.11 Yes 0 0 No -46 0.81 Yes 24 95.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 28468143 + NM_001330367 CCDC91 1 0.57 0.35 19 6.57 83.55 28 5.29 No 72 0.05 No 0 0 No -27 0.55 No 43 48.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 124428164 - NM_001304960 CCDC92 1 0.4 0.11 7 5.85 86.79 17 6.16 Yes 29 0.16 No 0 0 No -31 0.65 No 39 60.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 118705112 - NM_019044 CCDC93 1 0.28 0.17 12 4.59 88.91 35 4.6 No 53 -1.67 No 0 0 No -34 0.91 Yes 36 92.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 118709278 - NM_019044 CCDC93 1 10.26 4.6 69 9.72 87.26 21 5.11 No 57 1.07 Yes 28 0.49 Yes -26 0.61 No 44 86.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 118711463 - NM_019044 CCDC93 1 1.18 0.75 39 3.69 0 33 6.13 Yes 20 1.15 Yes 0 0 No -32 0.83 Yes 38 86.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 118715113 - NM_019044 CCDC93 1 0.29 0.19 11 8.72 94.86 23 5.29 No 10 0.06 No 0 0 No -23 0.8 Yes 47 89.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 118716055 - NM_019044 CCDC93 1 4.15 2.03 60 4.64 87.58 38 6.99 Yes 29 0.79 Yes 24 0.36 Yes -41 0.63 No 29 80.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 118731569 - NM_019044 CCDC93 1 0.36 0.15 10 -4.05 64.3 29 5.92 Yes 72 -3.34 No 0 0 No -28 0.67 Yes 42 58.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 118732474 - NM_019044 CCDC93 1 2.8 1.36 51 5.74 85.2 33 7 Yes 20 1.99 Yes 0 0 No -32 0.97 Yes 38 96.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 118742983 - NM_019044 CCDC93 1 0.34 0.18 10 8.97 92.61 30 9.06 Yes 17 1.6 Yes 0 0 No -29 0.87 Yes 41 94.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 118751640 - NM_019044 CCDC93 1 0.61 0.33 18 8.26 74.8 31 6.28 Yes -2 0.22 No 0 0 No -30 0.54 No 33 82.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 118762361 - NM_019044 CCDC93 1 1.25 0.9 41 5.19 73.23 17 5.32 No 4 0.91 Yes 0 0 No -24 0.75 Yes 46 67.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 4264809 + NM_018074 CCDC94 1 0.45 0.25 14 9.59 92 23 7.07 Yes 10 1.3 Yes 0 0 No -22 0.91 Yes 48 92.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 41828504 + NM_001346100 CCDC97 1 2.04 2.03 63 -1.64 0 26 5.48 No 13 1.09 Yes 0 0 No -25 0.93 Yes 45 91.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57449692 + NM_002987 CCL17 1 0.35 0.13 8 4.85 85.49 10 5 No 23 1.83 Yes 0 0 No -35 0.71 Yes 35 85.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57394317 + NM_002990 CCL22 1 0.03 0.26 17 4.6 81.19 18 5.48 No 5 0.28 No 20 0.88 Yes -23 0.53 No 53 62.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57398739 + NM_002990 CCL22 1 0.02 0.24 16 8.67 98.64 24 7.98 Yes 54 1.01 Yes 0 0 No -24 0.61 No 46 77.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 43384165 - NM_148672 CCL28 1 1.45 0.14 9 7.13 93.6 28 5.29 No 67 0.71 No 27 0.74 Yes -27 0.51 No 14 88.08 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 43384190 - NM_148672 CCL28 1 0.98 0.13 9 4.94 83.86 32 6 Yes 42 0.7 No 27 0.74 Yes -31 0.78 Yes 39 92.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 34202647 - NM_002985 CCL5 1 4.47 6.35 72 5.78 81.24 39 6.26 Yes 36 1.2 Yes 33 0.53 Yes -33 0.84 Yes 37 79.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 45099801 + NM_001029835 CCM2 1 0.3 0.49 29 10.05 84.99 34 7.05 Yes 37 1.19 Yes 0 0 No -33 0.81 Yes 37 83.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 45108046 + NM_001029835 CCM2 1 0.22 0.42 23 2.15 0 31 4.94 No 2 1.3 Yes 0 0 No -30 0.49 No 40 83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 45109987 + NM_001029835 CCM2 1 0.81 1.92 57 6.69 82.08 19 6.35 Yes 33 -3.23 No 19 0.77 Yes -18 0.64 No 51 64.88 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 45111348 + NM_001029835 CCM2 1 1.88 4.71 67 10.52 85.79 25 7.28 Yes 12 1.17 Yes 24 0.97 Yes -24 0.97 Yes 46 96.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 45112839 + NM_001029835 CCM2 1 0.16 0.33 19 7.82 85.76 28 10.84 Yes 15 1.85 Yes 0 0 No -27 0.83 Yes 43 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 45113840 + NM_001029835 CCM2 1 0.23 0.57 30 4.3 77.18 22 4.77 No 73 -3.69 No 22 0.71 Yes -21 0.56 No 49 68.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 122740084 - NM_001237 CCNA2 1 0.3 1.08 40 1.42 68.81 36 6.25 Yes 9 1.27 Yes 24 0.81 Yes -35 0.66 No 35 80.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 122740682 - NM_001237 CCNA2 1 0.07 0.15 8 4.73 82.2 9 5 No 67 0.38 No 0 0 No -23 0.68 Yes 47 66.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 122740731 - NM_001237 CCNA2 1 0.06 0.22 11 -1.02 0 31 6.59 Yes 18 0.41 No 0 0 No -30 0.53 No 47 75.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 122743787 - NM_001237 CCNA2 1 0.07 0.14 8 3.01 78.69 18 4.9 No 15 0.67 No 0 0 No -41 0.58 No 29 79.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 68467078 + NM_031966 CCNB1 1 0.06 0.31 15 5.26 81.16 22 5.91 Yes 40 1.28 Yes 21 0.68 Yes -21 0.72 Yes 49 85.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 68470062 + NM_031966 CCNB1 1 0.03 0.15 9 -4.13 0 12 4.24 No 45 1.76 Yes 20 0.68 Yes -30 0.65 No 40 52.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 68473102 + NM_031966 CCNB1 1 0.12 0.47 25 4.66 68.5 32 6.49 Yes 39 1.33 Yes 18 0.75 Yes -24 0.79 Yes 46 59.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 68473117 + NM_031966 CCNB1 1 2.83 10.56 72 5.38 88.31 19 4.9 No 54 1.35 Yes 18 0.75 Yes -18 0.43 No 52 73.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 20783778 - NM_182852 CCNB1IP1 1 3.58 4.35 68 7.45 82.14 31 7.91 Yes 18 1.36 Yes 31 0.85 Yes -30 0.7 Yes 39 81.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 20784010 - NM_182852 CCNB1IP1 1 4.08 4.93 71 5.08 87.68 27 5.74 Yes 31 0.17 No 26 0.88 Yes -26 0.68 Yes 44 72.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 20799047 - NM_182852 CCNB1IP1 1 0.2 0.11 7 8.57 89.4 25 5.92 Yes 41 -2.45 No 0 0 No -25 0.76 Yes 45 40.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 59399759 + NM_004701 CCNB2 1 0.06 0.14 8 0.3 0 25 7.94 Yes 12 0.98 Yes 0 0 No -24 0.65 No 46 68.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 99991481 - NM_001013399 CCNC 1 0.18 0.82 32 -3.03 0 42 7.97 Yes 20 0.12 No 0 0 No -41 0.57 No 29 86.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 99991491 - NM_001013399 CCNC 1 0.03 0.11 7 0.32 0 32 7.39 Yes 10 0.19 No 28 0.66 Yes -31 0.54 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 99992150 - NM_001013399 CCNC 1 3.88 16.86 72 6.37 90.5 32 5.82 Yes 55 0.66 No 31 0.65 Yes -31 0.54 No 39 54.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 99994336 - NM_001013399 CCNC 1 0.22 1.06 45 3.62 72.94 23 4.89 No 16 0.87 Yes 0 0 No -22 0.92 Yes 42 59.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 99997276 - NM_001013399 CCNC 1 0.42 1.94 59 2.39 73.24 43 7.69 Yes 35 0.9 Yes 26 0.48 Yes -36 0.62 No 34 62.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 99997449 - NM_001013399 CCNC 1 0.44 1.64 55 -5.15 77.25 28 4.7 No 12 0.35 No 24 0.75 Yes -28 0.49 No 42 41.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 99998141 - NM_001013399 CCNC 1 0.05 0.17 9 1.97 79.59 18 4.69 No 75 0.56 No 0 0 No -17 0.53 No 53 57.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99998170 - NM_001013399 CCNC 1 0.13 0.42 23 2.69 76.9 19 5 No 65 0.96 Yes 0 0 No -46 0.32 No 28 49.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 99998459 - NM_001013399 CCNC 1 0.15 0.49 25 3.78 0 13 4.36 No 20 -3.06 No 0 0 No -24 0.84 Yes 46 94.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 99998469 - NM_001013399 CCNC 1 0.71 2.19 63 -11.67 0 15 4 No 10 -2.42 No 0 0 No -14 0.84 Yes 56 83.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 4386055 + NM_001759 CCND2 1 0.02 0.26 14 10.25 89.66 18 5.98 Yes 5 1.96 Yes 0 0 No -22 0.51 No 53 59.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 4387892 + NM_001759 CCND2 1 0.05 0.97 27 0.76 66.42 17 4.8 No 4 -1.18 No 35 0.52 Yes -24 0.49 No 54 25.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 4387928 + NM_001759 CCND2 1 0.03 0.46 19 -18.02 69.7 39 6.71 Yes 26 -0.66 No 33 0.07 Yes -38 0.75 Yes 32 75.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 4388428 + NM_001759 CCND2 1 0.18 4.42 66 6.52 86.02 33 7.52 Yes 20 1.31 Yes 0 0 No -32 0.9 Yes 38 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 4388583 + NM_001759 CCND2 1 0.02 0.47 25 10.77 92.06 33 6.16 Yes 64 -1.42 No 0 0 No -32 0.33 No 38 43.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 4388908 + NM_001759 CCND2 1 0 0.13 7 6.7 84.58 32 6.67 Yes 39 0.15 No 0 0 No -31 0.72 Yes 39 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 4391593 + NM_001759 CCND2 1 0.04 1.08 44 11.58 89.25 27 5.74 Yes 37 0.49 No 0 0 No -26 0.38 No 44 60.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 4394440 + NM_001759 CCND2 1 2.54 64.97 72 10.97 92.78 31 7.1 Yes 18 1.87 Yes 30 0.89 Yes -30 0.7 Yes 40 89.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 4398270 + NM_001759 CCND2 1 0.21 3.35 64 6.85 79.86 30 5.83 Yes 76 0.7 No 0 0 No -29 0.78 Yes 41 83.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 4398478 + NM_001759 CCND2 1 0.13 2.11 56 3.44 74.93 39 7.34 Yes 26 0.91 Yes 0 0 No -26 0.85 Yes 44 76.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 4406806 + NM_001759 CCND2 1 0.01 0.22 13 5.75 77.57 24 6.22 Yes 3 1.2 Yes 0 0 No -26 0.36 No 44 39.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43486278 + NM_012142 CCNDBP1 1 2.5 4.54 72 10.53 89.4 41 11.95 Yes 28 1.62 Yes 41 0.77 Yes -41 0.7 Yes 29 76.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 43488971 + NM_012142 CCNDBP1 1 0.05 0.13 7 6.05 82.95 26 5.11 No 62 -5.59 No 0 0 No -25 0.63 No 45 63.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 30303884 + NM_001238 CCNE1 1 7.34 4.35 68 2.59 0 17 4.24 No 75 1.55 Yes 21 0.9 Yes -30 0.89 Yes 54 65.81 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 30311713 + NM_001238 CCNE1 1 0.2 0.21 14 6.54 80.69 16 5.91 Yes 3 0.09 No 0 0 No -23 0.35 No 39 49.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 95893998 - NM_057749 CCNE2 1 0.96 0.42 23 3.17 69.59 21 6.16 Yes 67 -5.64 No 20 0.79 Yes -20 0.78 Yes 50 77.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 95906201 - NM_057749 CCNE2 1 0.44 0.13 8 1.47 65.2 23 5.98 Yes 68 -4.96 No 26 0.58 Yes -26 0.5 No 44 33.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 95906345 - NM_057749 CCNE2 1 3.63 0.97 43 -0.05 66.65 35 7.39 Yes 76 0.96 Yes 0 0 No -34 0.61 No 32 65.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 2496705 + NM_001761 CCNF 1 0.81 0.53 22 10.82 94.04 28 5.48 No 19 0.21 No 0 0 No -25 0.88 Yes 45 87.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2499111 + NM_001761 CCNF 1 0.08 0.11 7 5.38 69.35 31 5.48 No 51 0.63 No 23 0.63 Yes -23 0.63 No 47 62.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 2499833 + NM_001761 CCNF 1 0.2 0.22 14 3.28 0 81 8.95 Yes 68 1.37 Yes 0 0 No -30 0.45 No 31 61.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 2501935 + NM_001761 CCNF 1 0.28 0.17 10 6.39 76.53 21 6.72 Yes 8 1.69 Yes 0 0 No -27 0.68 Yes 43 74.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 162868894 + NM_004060 CCNG1 1 0.35 2.21 61 -11.83 74.89 33 4.71 No 11 0.8 Yes 0 0 No -32 0.44 No 38 74.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 162868900 + NM_004060 CCNG1 1 0.04 0.25 12 -12.3 0 13 3.84 No 17 0.79 Yes 0 0 No -38 0.44 No 32 78.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 162870690 + NM_004060 CCNG1 1 0.02 0.22 13 -1.79 0 17 4.31 No 33 0.33 No 0 0 No -45 0.59 No 24 79.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 86690298 - NM_001239 CCNH 1 1.2 1.46 52 -1.38 0 28 6.69 Yes 15 1.03 Yes 0 0 No -27 0.88 Yes 43 93.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 86697614 - NM_001239 CCNH 1 0.09 0.13 7 7.89 78.79 46 7.4 Yes 62 0.49 No 27 0.75 Yes -23 0.77 Yes 47 66.76 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 86703824 - NM_001239 CCNH 1 0.53 0.78 30 7.34 80.38 32 5.73 Yes 19 0.22 No 32 0.83 Yes -32 0.5 No 38 71.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 86703953 - NM_001239 CCNH 1 0.25 0.35 19 1.73 69.83 17 5.28 No 35 0.83 Yes 0 0 No -26 0.41 No 51 44.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 86704947 - NM_001239 CCNH 1 0.94 1.25 49 9.29 95.16 38 6 Yes 35 0.39 No 26 0.62 Yes -33 0.68 Yes 37 83.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 86708339 - NM_001239 CCNH 1 0.09 0.13 8 -2.55 0 18 4.47 No 5 0.16 No 0 0 No -17 0.63 No 53 43.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 77969650 - NM_001348134 CCNI 1 0.28 2.54 59 8.61 88.47 21 5.55 No 76 1.14 Yes 0 0 No -25 0.74 Yes 45 72.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 77969808 - NM_001348134 CCNI 1 0.02 0.21 12 -4.8 0 11 4.12 No 33 0.01 No 0 0 No -52 0.42 No 22 53.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 77971991 - NM_001348134 CCNI 1 0.02 0.11 7 11.17 92.63 17 4.02 No 68 0.89 Yes 0 0 No -32 0.82 Yes 38 90.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 77973430 - NM_001348134 CCNI 1 0.04 0.29 15 6.75 86.29 29 4.81 No 1 0.18 No 0 0 No -26 0.33 No 44 45.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 77973859 - NM_001348134 CCNI 1 0.03 0.26 14 7.99 80.51 22 5.29 No 60 1.27 Yes 0 0 No -24 0.72 Yes 49 50.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 77974592 - NM_001348134 CCNI 1 0.15 1.31 51 7.06 85.17 21 5.48 No 8 1.47 Yes 0 0 No -24 0.94 Yes 46 96.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 77976455 - NM_001348134 CCNI 1 0.14 1.75 54 3.88 73.07 23 5.36 No 36 0.76 No 0 0 No -22 0.8 Yes 48 74.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 77976533 - NM_001348134 CCNI 1 0.02 0.19 12 -10.73 0 21 4.27 No 8 0.84 Yes 0 0 No -25 0.41 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 77977254 - NM_001348134 CCNI 1 0.05 0.32 19 -5.84 70.66 63 4.89 No 61 0.85 Yes 30 0.36 Yes -55 0.56 No 15 48.8 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 97816649 + NM_001134375 CCNJ 1 1.2 0.18 10 3.58 78.97 19 4.09 No 6 0.25 No 0 0 No -22 0.95 Yes 48 94.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97816652 + NM_001134375 CCNJ 1 3.9 0.6 33 3.31 77.96 22 4.33 No 9 0.25 No 0 0 No -25 0.94 Yes 45 94.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97816877 + NM_001134375 CCNJ 1 5.4 1.22 43 1.99 74.99 20 6.09 Yes 66 1.08 Yes 19 0.55 Yes -19 0.46 No 51 49.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 97816880 + NM_001134375 CCNJ 1 23.39 4.97 70 3.37 77.01 23 6.3 Yes 69 1.08 Yes 19 0.55 Yes -22 0.77 Yes 48 65.02 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 99958979 + NM_001099402 CCNK 1 0.21 0.44 25 4.49 83.68 22 5.1 No -2 0.78 Yes 0 0 No -21 0.84 Yes 49 92.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 99960128 + NM_001099402 CCNK 1 0.11 0.36 20 5.89 85.12 17 4.92 No 33 0.57 No 0 0 No -30 0.39 No 48 54.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 99961841 + NM_001099402 CCNK 1 0.05 0.17 11 -0.95 0 10 4 No 37 0.23 No 23 0.5 Yes -30 0.74 Yes 40 61.67 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 99968568 + NM_001099402 CCNK 1 0.03 0.11 7 4.58 85.35 32 5.83 Yes 38 2.21 Yes 0 0 No -50 0.48 No 20 44.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 99968568 + NM_001099402 CCNK 1 0.1 0.42 23 4.58 85.35 32 5.83 Yes 38 2.21 Yes 0 0 No -50 0.48 No 20 44.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 99969091 + NM_001099402 CCNK 1 0.09 0.33 17 2.9 82.78 43 4.72 No 43 0.19 No 0 0 No -27 0.46 No 43 34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 156867169 - NM_001308185 CCNL1 1 0.13 0.24 16 -8.06 0 10 3.87 No 15 0.41 No 0 0 No -27 0.49 No 43 53.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 156867910 - NM_001308185 CCNL1 1 0.14 0.28 17 5.19 88.17 38 7.59 Yes 61 0.1 No 0 0 No -27 0.56 No 33 59.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 156869720 - NM_001308185 CCNL1 1 22.09 12.1 72 6.17 84.11 33 6.88 Yes 20 1.12 Yes 32 0.87 Yes -32 0.79 Yes 38 75.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 156874873 - NM_001308185 CCNL1 1 96.22 51.74 72 2.75 67.81 38 8.3 Yes 25 1.43 Yes 32 0.71 Yes -37 0.78 Yes 33 84.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1326246 - NR_135154 CCNL2 1 104.1 63.49 72 10.39 93.27 27 5.6 Yes 52 -1.68 No 25 0.67 Yes -25 0.75 Yes 45 86.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1326246 - NR_135154 CCNL2 1 0.14 0.11 7 10.39 93.27 27 5.6 Yes 52 -1.68 No 25 0.67 Yes -25 0.75 Yes 45 86.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1328179 - NR_135154 CCNL2 1 0.74 0.47 26 -1.67 0 37 6.15 Yes 24 1.28 Yes 0 0 No -36 0.87 Yes 34 91.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1328820 - NR_135154 CCNL2 1 0.07 0.11 8 7.23 91.18 19 5.48 No 24 2.19 Yes 0 0 No -25 0.55 No 52 45.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1330891 - NR_135154 CCNL2 1 0.09 0.14 10 -4.97 0 31 4.88 No 27 0.59 No 0 0 No -29 0.72 Yes 43 65.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 1330918 - NR_135154 CCNL2 1 0.56 0.89 42 5.03 74.3 32 5.91 Yes 0 0.19 No 31 0.83 Yes -31 0.91 Yes 39 78.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1330981 - NR_135154 CCNL2 1 0.07 0.11 7 6.93 68.21 33 5.8 Yes 36 -2.15 No 0 0 No -32 0.85 Yes 38 93.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1333234 - NR_135154 CCNL2 1 0.08 0.13 7 4.39 0 41 5.75 Yes 12 0.79 Yes 0 0 No -34 0.53 No 36 56.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1333799 - NR_135154 CCNL2 1 1.18 1.53 54 7.25 71.41 45 8.19 Yes 32 1.22 Yes 0 0 No -44 0.72 Yes 26 88.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49089925 - NM_001277842 CCNT1 1 7.72 0.67 30 1.89 67.9 29 5.48 No 40 1.34 Yes 0 0 No -55 0.62 No 15 78.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 49089946 - NM_001277842 CCNT1 1 1135.76 104.65 72 5.05 77.43 32 5.32 No 19 1.36 Yes 34 0.82 Yes -34 0.84 Yes 36 94.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49089946 - NM_001277842 CCNT1 1 1.37 0.13 8 5.05 77.43 32 5.32 No 19 1.36 Yes 34 0.82 Yes -34 0.84 Yes 36 94.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49091963 - NM_001277842 CCNT1 1 0.21 0.31 15 -1.78 0 26 8.52 Yes 13 2.27 Yes 0 0 No -25 0.52 No 45 64.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49106360 - NM_001277842 CCNT1 1 1 0.94 32 10.13 89.4 57 6.74 Yes 48 1.28 Yes 0 0 No -48 0.67 Yes 14 55.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 49107084 - NM_001277842 CCNT1 1 0.12 0.11 7 3.14 73.41 21 6.78 Yes 8 0.88 Yes 0 0 No -20 0.9 Yes 50 89.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 135677386 + NM_001320748 CCNT2 1 0.57 0.28 16 0.21 0 17 4 No 10 0.45 No 0 0 No -26 0.48 No 48 54.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 135692197 + NM_001320748 CCNT2 1 0.46 0.31 17 9.2 92.98 28 5.57 Yes 76 0.77 Yes 0 0 No -27 0.79 Yes 43 73.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 135698166 + NM_001320748 CCNT2 1 0.2 0.15 11 5.2 73.11 27 5.28 No -3 0.35 No 0 0 No -26 0.47 No 44 75.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 135698620 + NM_001320748 CCNT2 1 0.4 0.26 16 2.53 82.62 27 3.66 No 8 0.09 No 0 0 No -26 0.88 Yes 44 65.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 135705333 + NM_001320748 CCNT2 1 0.34 0.14 8 7.52 86.71 19 6.07 Yes 6 0.24 No 0 0 No -23 0.81 Yes 47 77.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 135712050 + NM_001320748 CCNT2 1 0.78 0.57 25 8.26 80.96 54 5.87 Yes 16 1.6 Yes 28 0.93 Yes -38 0.44 No 32 83.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 35789555 + NM_001282853 CCNY 1 0.09 0.13 7 8.38 86.77 27 6.3 Yes 14 0.59 No 0 0 No -25 0.41 No 50 41.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 35856846 + NM_001282853 CCNY 1 0.15 0.28 16 7.16 89.13 30 4.48 No 26 -1.56 No 0 0 No -22 0.38 No 48 27.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 208579065 + NM_001330218 CCNYL1 1 1.53 0.53 25 8.81 85.05 37 7.35 Yes 24 1.58 Yes 36 0.87 Yes -36 0.91 Yes 34 96.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 208595176 + NM_001330218 CCNYL1 1 0.25 0.11 7 8.39 81.67 31 6.39 Yes 76 1.26 Yes 0 0 No -30 0.64 No 40 79.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 208611755 + NM_001330218 CCNYL1 1 0.3 0.19 11 -5.04 0 38 6.14 Yes 56 0.36 No 24 0.47 Yes -37 0.39 No 33 29.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 19551982 + NM_001323570 CCP110 1 0.18 0.31 16 -1.68 0 31 5.32 No 27 0.23 No 0 0 No -30 0.7 Yes 40 60.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 19557844 + NM_001323570 CCP110 1 0.31 0.44 23 7.45 86.87 26 5.03 No 13 0.31 No 0 0 No -26 0.59 No 44 87.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 19559836 + NM_001323570 CCP110 1 71.44 45.15 72 5.85 72.87 29 5.74 Yes 16 1.46 Yes 24 0.92 Yes -24 0.92 Yes 46 91.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 55692125 - NM_001204451 CCPG1 1 0.3 0.11 8 2.74 80.12 21 6.71 Yes 8 1.05 Yes 20 0.6 Yes -20 0.78 Yes 50 73.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66361080 + NM_005125 CCS 1 0.96 0.49 26 -0.98 0 21 4.58 No 66 0.04 No 20 0.84 Yes -20 0.75 Yes 50 64.88 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 66372624 + NM_005125 CCS 1 3.82 2.58 66 7.4 89.84 16 5.46 No 76 0.3 No 23 0.22 Yes -23 0.64 No 52 64.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 66372628 + NM_005125 CCS 1 0.58 0.42 23 3.31 0 20 5.7 Yes 52 -2.81 No 0 0 No -27 0.55 No 48 75.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 229463306 - NM_145257 CCSAP 1 0.57 0.17 8 10.39 88.72 21 6.74 Yes 1 1.16 Yes 20 0.6 Yes -20 0.88 Yes 50 94.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 229472097 - NM_145257 CCSAP 1 0.42 0.13 8 11.64 82.41 36 6.16 Yes 34 1.13 Yes 0 0 No -35 0.69 Yes 35 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 86133378 + NM_001284240 CCSER2 1 2.64 0.85 41 1.36 0 23 5.73 Yes 10 1.96 Yes 0 0 No -26 0.51 No 47 44.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 86133425 + NM_001284240 CCSER2 1 0.52 0.17 10 5.05 85.97 16 7.27 Yes 57 1.93 Yes 0 0 No -24 0.43 No 42 40.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 86139853 + NM_001284240 CCSER2 1 0.58 0.18 11 3.25 71.67 37 6.72 Yes 24 0 No 0 0 No -31 0.37 No 39 41.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 86178199 + NM_001284240 CCSER2 1 0.36 0.17 10 4.85 84.42 10 5.29 No 22 0.36 No 0 0 No -21 0.51 No 43 64.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 86191778 + NM_001284240 CCSER2 1 1.91 0.42 27 8.08 80.7 22 5.95 Yes 9 0.4 No 0 0 No -21 0.6 No 49 75.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 86198334 + NM_001284240 CCSER2 1 1.39 0.32 21 3.37 92.37 24 5.1 No 23 -1.31 No 0 0 No -23 0.6 No 47 73.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 86218786 + NM_001284240 CCSER2 1 0.43 0.13 7 3.23 83.77 26 5.39 No 55 1.64 Yes 0 0 No -25 0.75 Yes 45 72.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 86232787 + NM_001284240 CCSER2 1 1.12 0.5 25 2.98 77.41 46 6.91 Yes -1 0.45 No 41 0.37 Yes -45 0.57 No 25 78.23 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 86259630 + NM_001284240 CCSER2 1 3.25 1.22 45 10.34 89.83 68 8.57 Yes 55 1.33 Yes 34 0.55 Yes -34 0.7 Yes 39 63.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 69981711 + NM_001198842 CCT2 1 0.06 0.67 34 -10.14 0 21 4.11 No 8 1.16 Yes 0 0 No -23 0.36 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 69982117 + NM_001198842 CCT2 1 0.06 0.57 30 -2.55 0 18 4.3 No 35 0.62 No 0 0 No -18 0.56 No 53 51.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 69983624 + NM_001198842 CCT2 1 0.13 1.6 54 6.97 83.92 35 6.99 Yes 72 -3.41 No 0 0 No -26 0.66 No 44 62.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 69984517 + NM_001198842 CCT2 1 0.05 0.54 27 3.78 84.41 20 5.74 Yes 72 -4.81 No 0 0 No -23 0.85 Yes 47 90.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 69986757 + NM_001198842 CCT2 1 0.05 0.65 26 -8.29 0 32 7.99 Yes 19 1.9 Yes 0 0 No -31 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 69987317 + NM_001198842 CCT2 1 0.03 0.24 13 6.4 76.38 22 5.47 No 73 1.31 Yes 0 0 No -32 0.67 Yes 38 65.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 69993621 + NM_001198842 CCT2 1 0.03 0.28 16 1.11 68.34 27 3.75 No 63 1.05 Yes 23 0.65 Yes -26 0.58 No 51 74.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 69993644 + NM_001198842 CCT2 1 0.07 0.72 36 -10.55 0 22 5.66 Yes 68 0.57 No 0 0 No -25 0.83 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 69994383 + NM_001198842 CCT2 1 0.01 0.11 8 5.77 94.48 20 4.8 No 67 1.16 Yes 0 0 No -25 0.89 Yes 45 87.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156285661 - NM_001008800 CCT3 1 0.02 0.42 21 12.43 98.6 31 6.85 Yes 18 1.2 Yes 0 0 No -30 0.92 Yes 40 93.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156287360 - NM_001008800 CCT3 1 0.01 0.11 8 0.77 70.17 18 4.22 No 65 -4.35 No 23 0.66 Yes -25 0.79 Yes 45 47.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 156288824 - NM_001008800 CCT3 1 0.04 0.47 26 -2.08 0 35 6.25 Yes 67 -2.27 No 23 0.74 Yes -34 0.78 Yes 36 79.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156293100 - NM_001008800 CCT3 1 0.04 0.47 27 1.8 83.92 37 5.64 Yes 74 -2.37 No 0 0 No -29 0.73 Yes 41 73.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 156294878 - NM_001008800 CCT3 1 0.31 3.01 65 5.99 94.01 35 6.18 Yes 52 0.12 No 25 0.58 Yes -25 0.63 No 45 64.14 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156303076 - NM_001008800 CCT3 1 0.16 1.81 18 3.01 0 32 5.92 Yes 52 1.09 Yes 32 0.66 Yes -32 0.57 No 38 48.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 156304700 - NM_001008800 CCT3 1 15.77 1.72 53 3.2 0 13 4.2 No 48 1.44 Yes 0 0 No -47 0.71 Yes 23 90.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156304710 - NM_001008800 CCT3 1 15880.06 1615.89 72 7.34 78.05 100 11.8 Yes 38 1.46 Yes 37 0.77 Yes -37 0.75 Yes 33 82.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 62095841 - NM_001256721 CCT4 1 0.01 0.15 11 -5.24 0 19 4.28 No 6 0.78 Yes 0 0 No -25 0.6 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 62099438 - NM_001256721 CCT4 1 0.05 0.33 19 5.6 88.61 23 4.74 No 49 0.39 No 0 0 No -22 0.63 No 34 46.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 62099717 - NM_001256721 CCT4 1 0.03 0.24 14 -2.41 0 11 3.9 No 69 -0.96 No 0 0 No -30 0.82 Yes 40 88.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 62100427 - NM_001256721 CCT4 1 0.03 0.21 10 0.34 82.37 17 4.73 No 4 1.27 Yes 0 0 No -28 0.63 No 42 69.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 62115390 - NM_001256721 CCT4 1 0.07 0.56 26 1.15 68.93 27 7.05 Yes 14 1.11 Yes 0 0 No -46 0.66 No 44 71.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 62115393 - NM_001256721 CCT4 1 3.89 27.9 72 9.71 80.68 24 6.89 Yes 11 1.12 Yes 23 0.87 Yes -43 0.63 No 47 68.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 10254877 + NM_001306156 CCT5 1 0.04 0.38 22 3.38 76.06 19 5.28 No 32 0.67 No 25 0.9 Yes -25 0.78 Yes 45 50.14 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 10258198 + NM_001306156 CCT5 1 0.03 0.32 17 -2.12 54.15 19 5.38 No 40 0.98 Yes 27 0.31 Yes -52 0.31 No 18 81.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 10258231 + NM_001306156 CCT5 1 0.08 0.72 35 -2.3 0 12 4.24 No 73 0.99 Yes 0 0 No -39 0.57 No 31 88.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 10258515 + NM_001306156 CCT5 1 0.01 0.14 10 -13.71 0 12 2.89 No 50 1.31 Yes 0 0 No -42 0.55 No 28 34.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 10260888 + NM_001306156 CCT5 1 0.02 0.24 14 -5.2 0 41 4.38 No 65 0.46 No 28 0.81 Yes -13 0.43 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 10264740 + NM_001306156 CCT5 1 0.01 0.11 8 9.34 78.41 25 5.35 No 12 0.5 No 23 0.79 Yes -24 0.86 Yes 46 88.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 10264749 + NM_001306156 CCT5 1 0.21 2.81 62 -4.62 0 12 4.11 No 21 0.49 No 23 0.79 Yes -33 0.85 Yes 37 89.43 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 10264769 + NM_001306156 CCT5 1 0.09 1.03 40 -9.12 0 26 5.38 No 41 0.5 No 0 0 No -25 0.6 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 56120087 + NM_001762 CCT6A 1 0.01 0.14 9 -6.08 0 13 3.87 No 22 0.76 No 31 0.83 Yes -34 0.57 No 36 59.92 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 56120507 + NM_001762 CCT6A 1 0.03 0.42 25 7.44 86.43 39 7.13 Yes 26 0.9 Yes 0 0 No -38 0.75 Yes 32 74.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 56123294 + NM_001762 CCT6A 1 0.01 0.13 8 -10.14 0 15 3.94 No 60 0.21 No 0 0 No -14 0.64 No 56 26.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 56126056 + NM_001762 CCT6A 1 0.02 0.14 9 -3.49 81.36 23 7.87 Yes 10 1.53 Yes 0 0 No -23 0.45 No 27 60.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 56126084 + NM_001762 CCT6A 1 0.02 0.11 7 -15.53 79.49 35 5.01 No 38 1.52 Yes 0 0 No -23 0.55 No 36 54.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 56126281 + NM_001762 CCT6A 1 0.03 0.51 29 -5.17 0 17 3.99 No 26 0.15 No 25 0.62 Yes -38 0.77 Yes 32 61.41 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 56130358 + NM_001762 CCT6A 1 0.02 0.29 20 5.15 69.4 18 7.2 Yes 5 1.61 Yes 25 0.9 Yes -21 0.87 Yes 49 78.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 73467630 + NM_001166285 CCT7 1 0.08 1.21 45 6.98 84.54 29 5.24 No 6 0.75 No 0 0 No -28 0.87 Yes 42 73.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 73470173 + NM_001166285 CCT7 1 2.12 16.19 72 -9.18 63.01 19 5.36 No 69 0.53 No 22 0.82 Yes -22 0.71 Yes 48 29.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 73471128 + NM_001166285 CCT7 1 0.02 0.22 13 0.91 0 27 6.16 Yes 14 1.06 Yes 0 0 No -26 0.95 Yes 44 97.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73476992 + NM_001166285 CCT7 1 0.02 0.19 11 5.26 82.32 17 5.38 No 65 0.68 No 0 0 No -25 0.57 No 45 54.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 73477461 + NM_001166285 CCT7 1 0.01 0.15 9 5.6 72.7 16 5.39 No 30 -1.59 No 0 0 No -24 0.66 No 46 72.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 73478435 + NM_001166285 CCT7 1 0.01 0.13 8 0.05 0 15 3.68 No 66 -4.53 No 0 0 No -14 0.61 No 56 50.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 73479480 + NM_001166285 CCT7 1 0.04 0.6 7 2.9 67.28 37 6.51 Yes 24 0.7 No 0 0 No -28 0.56 No 34 57.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30428904 - NM_001282909 CCT8 1 0.01 0.21 10 -12.36 0 18 4.11 No 28 1.15 Yes 0 0 No -40 0.89 Yes 30 93.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30433718 - NM_001282909 CCT8 1 0.01 0.17 11 4.1 68.27 24 5.48 No 26 1.37 Yes 25 0.72 Yes -38 0.72 Yes 32 78.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 30434535 - NM_001282909 CCT8 1 0.02 0.18 11 5.6 76.98 14 5.48 No 44 0.22 No 0 0 No -24 0.38 No 14 47.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30434556 - NM_001282909 CCT8 1 0.24 2.74 63 -14.71 0 14 4.24 No 23 0.19 No 0 0 No -38 0.58 No 35 63.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30434560 - NM_001282909 CCT8 1 0.02 0.26 13 -3.36 0 35 5.61 Yes 19 0.2 No 0 0 No -34 0.55 No 39 72.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 30434563 - NM_001282909 CCT8 1 0.03 0.29 16 -14.99 0 32 5.45 No 16 0.21 No 0 0 No -31 0.51 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30434564 - NM_001282909 CCT8 1 0.08 0.89 43 -15.53 0 31 5.4 No 15 0.22 No 0 0 No -30 0.51 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30437158 - NM_001282909 CCT8 1 0.06 0.79 40 7.06 94.29 20 5.83 Yes 7 1.09 Yes 0 0 No -19 0.73 Yes 51 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30438833 - NM_001282909 CCT8 1 0.01 0.17 10 6.62 90.92 28 5.29 No 26 0.05 No 0 0 No -27 0.43 No 20 49.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30439414 - NM_001282909 CCT8 1 0.01 0.11 7 -1.8 0 17 3.5 No 51 -5.02 No 28 0.69 Yes -12 0.47 No 58 47.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 30442649 - NM_001282909 CCT8 1 0.03 0.22 13 1.74 0 15 4.36 No 45 0.74 No 0 0 No -44 0.9 Yes 26 85.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 30444310 - NM_001282909 CCT8 1 0.15 1.21 42 -0.1 63.04 44 5.77 Yes 25 1.49 Yes 37 0.73 Yes -37 0.89 Yes 33 78.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 5945559 + NM_015622 CCZ1 1 0.91 0.5 28 10.61 86.79 46 5.7 Yes 41 0.53 No 0 0 No -31 0.91 Yes 39 91.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 5946519 + NM_015622 CCZ1 1 6.3 0.29 7 4.67 83.86 32 7.19 Yes 19 0.82 Yes 0 0 No -25 0.66 No 45 80.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 5959393 + NM_015622 CCZ1 1 0.31 0.14 10 8.75 91.61 18 4.19 No 65 2.02 Yes 0 0 No -24 0.8 Yes 46 75.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5965265 + NM_015622 CCZ1 1 0.91 0.19 12 -1.5 72.01 43 7.26 Yes 30 1.59 Yes 0 0 No -24 0.73 Yes 46 90.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6858748 - NM_198097 CCZ1B 1 0.25 0.31 16 10.08 88.27 50 5.14 No 37 0.76 No 0 0 No -35 0.9 Yes 35 92.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 74473217 + NM_133493 CD109 1 3.54 0.42 24 9.37 85.36 26 6.5 Yes 13 1.58 Yes 0 0 No -25 0.56 No 35 57.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 74531295 + NM_133493 CD109 1 1.05 0.18 10 8 89.61 18 5.49 No 5 0.49 No 0 0 No -22 0.2 No 53 29.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 833987 + NM_004357 CD151 1 0.65 0.14 9 5.73 90.09 16 6 Yes 3 1.22 Yes 23 0.75 Yes -29 0.62 No 41 67.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 836804 + NM_004357 CD151 1 0.31 0.22 15 -3.18 80.46 19 5.96 Yes 6 0.96 Yes 0 0 No -30 0.86 Yes 40 93.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 109689529 - NM_001142401 CD164 1 0.11 0.71 29 5.12 83.69 23 4.9 No 10 0.85 Yes 25 0.92 Yes -25 0.41 No 50 53.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 109700854 - NM_001142401 CD164 1 0.03 0.18 11 -0.89 0 22 4.58 No 26 0.49 No 0 0 No -55 0.55 No 15 85.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 66481842 - NM_005582 CD180 1 0.44 0.42 23 -4.67 0 34 5.26 No 21 1.04 Yes 0 0 No -33 0.56 No 37 69.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 66486920 - NM_005582 CD180 1 2.03 2.1 52 8.39 95.02 25 5.2 No 74 0.88 Yes 0 0 No -24 0.57 No 46 86.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 66488400 - NM_005582 CD180 1 0.8 0.69 35 8.66 86.11 30 6.75 Yes 17 0.52 No 0 0 No -29 0.7 Yes 41 89.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 28944264 + NM_001178098 CD19 1 0.18 0.25 16 5.85 77.15 36 6.08 Yes NA NA NA 0 0 No -57 0.37 No 13 72.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 28944523 + NM_001178098 CD19 1 0.29 0.58 31 -9.79 0 9 3.87 No 68 -4.42 No 33 0.38 Yes -8 0.38 No 40 27.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 28944752 + NM_001178098 CD19 1 0.53 1.28 51 3.65 67.84 35 6.08 Yes 22 0.51 No 0 0 No -34 0.83 Yes 36 88.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 28944992 + NM_001178098 CD19 1 0.12 0.22 14 8.58 93.84 28 5.29 No 15 1.9 Yes 0 0 No -27 0.87 Yes 43 91.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28946750 + NM_001178098 CD19 1 0.99 1.78 56 6.06 76.24 31 5.48 No 56 -2.56 No 18 0.92 Yes -23 0.8 Yes 48 76.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 28947233 + NM_001178098 CD19 1 0.2 0.5 25 4.61 85.02 18 6.75 Yes 67 0.69 No 0 0 No -26 0.37 No 44 51.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28947600 + NM_001178098 CD19 1 0.04 0.11 7 9.08 91.81 19 8.11 Yes 39 2.37 Yes 0 0 No -18 0.48 No 52 65.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 28947600 + NM_001178098 CD19 1 0.46 1.4 46 9.08 91.81 19 8.11 Yes 39 2.37 Yes 0 0 No -18 0.48 No 52 65.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 28948912 + NM_001178098 CD19 1 0.1 0.24 13 0.44 68.3 28 5.39 No 1 0.25 No 22 0.39 Yes -27 0.62 No 43 58.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 28949376 + NM_001178098 CD19 1 8.51 1.31 48 3.22 73.08 57 9.02 Yes 44 1.83 Yes 0 0 No -31 0.87 Yes 39 68.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 28949996 + NM_001178098 CD19 1 1446.08 257.56 72 5.35 77.07 25 6.06 Yes 76 2.07 Yes 29 0.7 Yes -32 0.43 No 39 69.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 28950198 + NM_001178098 CD19 1 0.1 0.29 15 0.91 0 13 3.87 No 56 1.88 Yes 0 0 No -38 0.41 No 31 61.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 28950415 + NM_001178098 CD19 1 0.04 0.13 7 0.5 70.81 17 4.8 No 30 -3.15 No 0 0 No -16 0.39 No 54 32.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 112066381 + NM_001004196 CD200 1 1.9 2.13 62 1.72 73.97 26 5.1 No 53 0.22 No 30 0.87 Yes -25 0.8 Yes 45 59.52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 112066409 + NM_001004196 CD200 1 11.65 12.97 72 3.17 0 36 5.38 No 20 0.69 No 30 0.87 Yes -35 0.43 No 38 56.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 35821475 + NM_001771 CD22 1 6.49 5.67 69 3.86 65.96 25 5.57 Yes 12 -1.65 No 24 0.93 Yes -24 0.87 Yes 46 87.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 35822808 + NM_001771 CD22 1 0.37 0.39 20 2.35 67.08 37 6.49 Yes -2 0.27 No 0 0 No -33 0.54 No 60 30.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 35822829 + NM_001771 CD22 1 3.08 2.92 61 7.63 81.76 27 5.47 No 19 0.5 No 0 0 No -27 0.81 Yes 44 38.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 35823423 + NM_001771 CD22 1 0.43 0.32 15 3.46 73.57 26 5.02 No 0 1.45 Yes 23 0.82 Yes -25 0.56 No 45 45.42 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35823455 + NM_001771 CD22 1 24.74 17.42 71 0.67 0 9 3.87 No 32 1.44 Yes 23 0.82 Yes -30 0.66 No 40 81.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 35823480 + NM_001771 CD22 1 0.54 0.4 20 1.27 75.97 34 5.83 Yes 57 1.44 Yes 27 0.66 Yes -25 0.43 No 37 41.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35823496 + NM_001771 CD22 1 3.92 2.56 61 -5.91 63.86 24 4.86 No 73 1.43 Yes 27 0.66 Yes -23 0.89 Yes 47 87.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 35823523 + NM_001771 CD22 1 0.11 0.1 7 -9.3 73.74 21 5.89 Yes 8 1.18 Yes 24 0.1 Yes -29 0.65 No 20 88.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 35823555 + NM_001771 CD22 1 0.74 0.51 24 6.77 83.01 25 6.4 Yes 40 1.2 Yes 24 0.1 Yes -17 0.4 No 53 26.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35827051 + NM_001771 CD22 1 0.2 0.53 26 4.95 74.74 49 7.6 Yes 36 2.18 Yes 36 0.62 Yes -35 0.59 No 22 59.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35823423 + NM_001771 CD22 1 0.55 0.31 19 3.46 73.57 26 5.02 No 0 1.45 Yes 23 0.82 Yes -25 0.56 No 45 45.42 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35823455 + NM_001771 CD22 1 38.53 27.44 72 0.67 0 9 3.87 No 32 1.44 Yes 23 0.82 Yes -30 0.66 No 40 81.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 35823480 + NM_001771 CD22 1 1.73 1.28 48 1.27 75.97 34 5.83 Yes 57 1.44 Yes 27 0.66 Yes -25 0.43 No 37 41.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35823496 + NM_001771 CD22 1 7.07 5.19 69 -5.91 63.86 24 4.86 No 73 1.43 Yes 27 0.66 Yes -23 0.89 Yes 47 87.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 35823555 + NM_001771 CD22 1 4.71 3.46 64 6.77 83.01 25 6.4 Yes 40 1.2 Yes 24 0.1 Yes -17 0.4 No 53 26.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35823756 + NM_001771 CD22 1 0.18 0.13 8 3.46 70.03 30 6 Yes 17 0.79 Yes 0 0 No -29 0.74 Yes 41 70.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 35826942 + NM_001771 CD22 1 0.55 1.4 52 -0.72 0 36 6.48 Yes 39 1.96 Yes 0 0 No -25 0.6 No 45 91.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 35826964 + NM_001771 CD22 1 0.07 0.24 15 6.15 76.58 14 5.45 No 61 1.97 Yes 0 0 No -28 0.45 No 42 43.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 35827051 + NM_001771 CD22 1 2.75 7.64 71 4.95 74.74 49 7.6 Yes 36 2.18 Yes 36 0.62 Yes -35 0.59 No 22 59.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35827153 + NM_001771 CD22 1 0.14 0.36 23 5.34 0 16 4.58 No 51 0.99 Yes 24 0.65 Yes -20 0.65 No 50 55.4 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35832339 + NM_001771 CD22 1 0.13 0.33 19 1.72 75.1 27 4.62 No 31 -1.95 No 0 0 No -26 0.71 Yes 44 72.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 35832428 + NM_001771 CD22 1 2.78 7.07 72 7.49 83.16 23 4.38 No 3 1.24 Yes 22 0.83 Yes -22 0.56 No 48 55.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35832431 + NM_001771 CD22 1 1.26 3.15 67 0.99 72.13 26 4.57 No 6 1.22 Yes 0 0 No -25 0.6 No 45 63.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 35834745 + NM_001771 CD22 1 0.09 0.17 11 9.15 91.52 24 5.36 No 11 0.43 No 0 0 No -23 0.73 Yes 47 83.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 35835735 + NM_001771 CD22 1 0.45 1.07 40 1.37 0 32 5.59 Yes 24 0.42 No 0 0 No -31 0.77 Yes 39 77.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 35836763 + NM_001771 CD22 1 0.21 0.53 21 -1.95 56.83 36 7.2 Yes 23 1.53 Yes 0 0 No -31 0.77 Yes 39 80 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 35837055 + NM_001771 CD22 1 0.06 0.11 7 0.18 74.49 35 7.07 Yes 22 0.43 No 0 0 No -34 0.95 Yes 36 96.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 35837061 + NM_001771 CD22 1 0.06 0.15 9 -6.33 0 11 3.87 No 28 0.42 No 0 0 No -40 0.95 Yes 30 96.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 67534307 - NM_001303618 CD226 1 0.46 1.64 47 10.88 88.99 21 8.34 Yes 8 1.51 Yes 0 0 No -20 0.41 No 50 44.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67534645 - NM_001303618 CD226 1 0.28 0.9 43 -0.96 69.93 58 7.54 Yes 9 -2.17 No 0 0 No -30 0.53 No 32 80.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 67534662 - NM_001303618 CD226 1 0.24 0.74 38 0.02 0 41 6.37 Yes 49 -2.1 No 27 0.59 Yes -21 0.63 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 67535298 - NM_001303618 CD226 1 0.23 0.78 27 3.42 81.38 17 5.48 No 57 0.47 No 0 0 No -20 0.73 Yes 50 57.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 67535353 - NM_001303618 CD226 1 0.49 1.68 36 6.96 75.95 58 7.68 Yes 2 0.52 No 0 0 No -55 0.54 No 18 81.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 67546052 - NM_001303618 CD226 1 0.5 1.36 45 8.88 90.67 25 6.6 Yes 12 0.34 No 0 0 No -24 0.41 No 46 50.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 67563278 - NM_001303618 CD226 1 0.53 1.13 44 2.86 0 27 8.13 Yes 14 1.39 Yes 0 0 No -26 0.88 Yes 44 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 67571280 - NM_001303618 CD226 1 0.21 0.46 23 8.45 76.34 45 7.41 Yes 48 1.02 Yes 0 0 No -44 0.59 No 26 85.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 67577839 - NM_001303618 CD226 1 3.43 7.17 71 12.59 97.68 29 6.22 Yes 49 0.97 Yes 0 0 No -28 0.75 Yes 42 77.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 67603082 - NM_001303618 CD226 1 1.56 3.14 68 10.07 87.17 24 5.81 Yes 35 -2.42 No 0 0 No -29 0.51 No 41 57.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 67611805 - NM_001303618 CD226 1 0.17 0.38 24 9.95 89.37 24 4.98 No 30 -1.93 No 28 0.54 Yes -23 0.46 No 47 62.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 6555310 + NM_001242 CD27 1 0.88 4.49 70 6.53 76.9 43 7.02 Yes 30 0.31 No 0 0 No -42 0.89 Yes 28 86.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6559708 + NM_001242 CD27 1 0.17 0.53 27 1.18 78.93 24 7.94 Yes 11 1.17 Yes 0 0 No -23 0.88 Yes 47 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6560321 + NM_001242 CD27 1 0.83 3.51 63 9.86 78.74 35 6.16 Yes 73 0.95 Yes 0 0 No -34 0.91 Yes 36 87.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6560410 + NM_001242 CD27 1 0.03 0.11 7 -1.14 62.84 43 7.99 Yes 63 1.94 Yes 19 0.91 Yes -45 0.67 Yes 24 70.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6560479 + NM_001242 CD27 1 0.07 0.25 16 2.34 87.08 20 4.8 No 53 0.87 Yes 0 0 No -18 0.59 No 52 63.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 5456072 + NM_014143 CD274 1 0.67 0.42 18 -7.73 0 18 4.06 No 60 -5.73 No 29 0.41 Yes -39 0.4 No 39 43.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 5466773 + NM_014143 CD274 1 0.26 0.19 12 -6.05 0 21 5.52 No 8 0.42 No 0 0 No -35 0.63 No 35 72.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 47471730 + NM_012120 CD2AP 1 2.03 4.86 67 9.65 93.18 61 7.59 Yes 6 0.58 No 0 0 No -26 0.84 Yes 44 81.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 47472412 + NM_012120 CD2AP 1 0.16 0.43 21 8.18 95.57 23 6 Yes 67 -3.74 No 0 0 No -22 0.77 Yes 48 75.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 47483518 + NM_012120 CD2AP 1 0.13 0.33 20 9.67 85.23 24 5.26 No 11 0.02 No 0 0 No -23 0.72 Yes 47 76.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 47494363 + NM_012120 CD2AP 1 0.69 1.71 57 7.73 84.23 15 6.53 Yes 2 1.07 Yes 0 0 No -27 0.89 Yes 43 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 47512343 + NM_012120 CD2AP 1 0.09 0.17 9 -1.35 81.51 29 8.67 Yes 16 0.99 Yes 0 0 No -28 0.46 No 42 51.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 47547123 + NM_012120 CD2AP 1 0.1 0.22 11 -7.1 78.33 26 6.71 Yes 13 0.44 No 23 0.81 Yes -26 0.64 No 44 68.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 47548572 + NM_012120 CD2AP 1 0.06 0.14 8 -2.56 60.12 43 6.63 Yes 30 0.6 No 29 0.84 Yes -42 0.59 No 28 83.2 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 47571494 + NM_012120 CD2AP 1 0.14 0.31 16 10.39 93.42 15 6.16 Yes 2 1.36 Yes 0 0 No -21 0.49 No 49 62.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 47580213 + NM_012120 CD2AP 1 0.16 0.36 21 -4.6 0 25 5.23 No 12 0.5 No 0 0 No -24 0.55 No 45 63.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30363911 - NM_006110 CD2BP2 1 0.12 0.21 13 5.5 83.23 20 5.1 No 7 0.28 No 0 0 No -19 0.65 No 51 85.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 30364436 - NM_006110 CD2BP2 1 0.17 0.33 20 3.63 0 14 4.47 No 51 1.14 Yes 21 0.52 Yes -19 0.53 No 48 39.31 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 30364606 - NM_006110 CD2BP2 1 0.57 0.6 29 1.51 75.63 27 6.22 Yes 68 -3.17 No 0 0 No -26 0.48 No 44 46.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30365318 - NM_006110 CD2BP2 1 0.17 0.39 22 9.43 92.76 19 6.48 Yes -4 0.59 No 0 0 No -21 0.6 No 52 63.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30365318 - NM_006110 CD2BP2 1 0.07 0.19 11 9.43 92.76 19 6.48 Yes -4 0.59 No 0 0 No -21 0.6 No 52 63.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30365375 - NM_006110 CD2BP2 1 0.07 0.17 10 0.01 0 24 6 Yes NA NA NA 0 0 No -32 0.58 No 38 45.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30365402 - NM_006110 CD2BP2 1 0.04 0.1 7 2.09 63.31 39 6.4 Yes NA NA NA 27 0.52 Yes -29 0.45 No 43 39.96 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 30366264 - NM_006110 CD2BP2 1 0.1 0.19 9 8.14 87.83 19 4.9 No 6 0.7 No 26 0.62 Yes -26 0.48 No 52 58.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72470940 + NM_007261 CD300A 1 0.17 0.13 8 8.94 89.16 34 5.83 Yes 61 -2.43 No 0 0 No -19 0.69 Yes 43 68.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 72473987 + NM_007261 CD300A 1 0.31 0.31 17 2.72 70.58 20 5 No 47 1.78 Yes 0 0 No -59 0.33 No 52 59.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 72480632 + NM_007261 CD300A 1 0.37 0.28 16 5.32 82.7 20 4.9 No 26 -1.13 No 0 0 No -20 0.66 No 51 54.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8368838 - NM_016579 CD320 1 1.93 2.36 58 4.86 79.07 28 5.39 No 52 -4.23 No 0 0 No -22 0.9 Yes 48 64.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 8368841 - NM_016579 CD320 1 0.17 0.19 14 1.65 68.12 25 5.1 No 49 -4.04 No 0 0 No -19 0.78 Yes 51 71.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 8368858 - NM_016579 CD320 1 0.54 0.6 25 0.87 72.81 23 5.1 No 32 -2.98 No 22 0.97 Yes -22 0.92 Yes 48 72.35 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8370186 - NM_016579 CD320 1 0.08 0.11 8 4.68 73.28 18 6.46 Yes 5 1.26 Yes 0 0 No -23 0.81 Yes 47 83.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8370423 - NM_016579 CD320 1 0.27 0.22 14 6.92 87.49 20 7.14 Yes 63 1.39 Yes 0 0 No -19 0.7 Yes 51 88.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49839142 + NM_001774 CD37 1 0.16 1.03 41 7.44 87.58 30 5.46 No 17 -0.35 No 29 0.9 Yes -29 0.7 Yes 41 71.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 49839857 + NM_001774 CD37 1 0.01 0.1 7 7.77 86.67 30 5.47 No 17 0.14 No 0 0 No -29 0.67 Yes 41 63.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 49840439 + NM_001774 CD37 1 0.09 0.65 32 8.7 84.62 39 6.71 Yes 46 1.6 Yes 29 0.76 Yes -41 0.54 No 43 43.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 49840882 + NM_001774 CD37 1 0.03 0.19 11 0.07 57.19 30 6 Yes 25 0.4 No 29 0.73 Yes -27 0.57 No 53 54.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 49841192 + NM_001774 CD37 1 0.01 0.11 7 -8.18 0 14 4.47 No 15 0.98 Yes 0 0 No -27 0.77 Yes 43 59.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 49841209 + NM_001774 CD37 1 0.02 0.14 8 -1.82 57.97 21 5.1 No 32 0.95 Yes 0 0 No -44 0.77 Yes 61 42.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 49841412 + NM_001774 CD37 1 0.33 2.06 62 6.37 86.02 22 6.56 Yes 9 1.81 Yes 21 0.92 Yes -21 0.91 Yes 49 92.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 49841986 + NM_001774 CD37 1 0.23 1.35 48 6.73 77.92 33 6.24 Yes 37 2.14 Yes 0 0 No -49 0.76 Yes 21 79.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49842598 + NM_001774 CD37 1 0.05 0.25 11 1.4 0 15 4.58 No 21 1.13 Yes 0 0 No -33 0.58 No 36 66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 49842914 + NM_001774 CD37 1 0.14 0.46 23 14.32 86.68 24 7.03 Yes 51 0.25 No 23 0.56 Yes -33 0.57 No 37 63.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 49842914 + NM_001774 CD37 1 3.08 9.67 71 14.32 86.68 24 7.03 Yes 51 0.25 No 23 0.56 Yes -33 0.57 No 37 63.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 49843672 + NM_001774 CD37 1 0.21 0.68 32 6.24 83.47 21 8.04 Yes -4 0.7 No 0 0 No -26 0.86 Yes 49 41.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 15782426 + NM_001775 CD38 1 0.58 0.93 38 6.2 78.31 39 6.43 Yes 46 0.62 No 0 0 No -31 0.53 No 39 60.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 15819998 + NM_001775 CD38 1 0.17 0.35 20 6.97 77.89 31 5.92 Yes 18 0.17 No 0 0 No -30 0.86 Yes 40 95.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 15835863 + NM_001775 CD38 1 0.07 0.11 8 3.28 79.9 20 5.73 Yes 62 0.24 No 0 0 No -26 0.36 No 44 46.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 15839416 + NM_001775 CD38 1 0.12 0.21 11 10.79 81.65 29 5.54 No 71 1.37 Yes 0 0 No -28 0.87 Yes 42 92.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 15839884 + NM_001775 CD38 1 0.05 0.1 7 11.25 96.88 28 5.48 No 29 0.35 No 0 0 No -25 0.64 No 45 58.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 15842076 + NM_001775 CD38 1 0.62 1.17 46 1.37 78.66 26 4.95 No 13 1 Yes 0 0 No -25 0.69 Yes 45 69.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 15849897 + NM_001775 CD38 1 0.1 0.11 7 6.22 81.69 25 6.7 Yes 12 1.46 Yes 0 0 No -24 0.93 Yes 46 90.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 15853916 + NM_001775 CD38 1 0.16 0.22 12 10.09 79.75 21 8.86 Yes 8 1.62 Yes 0 0 No -20 0.78 Yes 50 75.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44750362 + NM_001302753 CD40 1 0.05 0.25 12 5.49 76.7 38 6.32 Yes 1 0.97 Yes 26 0.57 Yes -37 0.73 Yes 44 54.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 44750689 + NM_001302753 CD40 1 0.45 2.33 63 9.65 88.83 34 5.81 Yes 48 0.85 Yes 0 0 No -33 0.84 Yes 37 92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44750876 + NM_001302753 CD40 1 0.5 2.31 61 2.02 0 25 6.39 Yes 4 1.53 Yes 0 0 No -24 0.92 Yes 46 96.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44751254 + NM_001302753 CD40 1 0.08 0.58 29 3.37 0 9 3.87 No 51 -0.96 No 0 0 No -31 0.73 Yes 39 83.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 44751770 + NM_001302753 CD40 1 0.24 1.22 41 -0.29 0 15 3.87 No 20 1.21 Yes 0 0 No -32 0.74 Yes 38 70.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44756784 + NM_001302753 CD40 1 1.09 0.14 9 1.62 0 11 4.12 No 14 1.04 Yes 0 0 No -26 0.68 Yes 44 72.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44752656 + NM_001302753 CD40 1 0.13 0.57 26 3.92 70.07 65 9.67 Yes 52 1.05 Yes 0 0 No -33 0.67 Yes 18 52.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 44756784 + NM_001302753 CD40 1 4.49 0.35 21 1.62 0 11 4.12 No 14 1.04 Yes 0 0 No -26 0.68 Yes 44 72.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44756973 + NM_001302753 CD40 1 2.76 14.22 72 1.97 0 42 8.65 Yes 43 1.17 Yes 0 0 No -42 0.48 No 28 76.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 44757101 + NM_001302753 CD40 1 0.05 0.22 14 4.81 87.21 22 4.69 No 9 0.72 No 0 0 No -21 0.92 Yes 49 95.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 44757596 + NM_001302753 CD40 1 0.11 0.61 27 2.23 78.23 44 5.8 Yes 31 -1.49 No 0 0 No -25 0.56 No 37 47.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 35198148 + NM_000610 CD44 1 0.15 0.99 40 10.09 88.84 17 5.89 Yes 37 1.67 Yes 22 0.22 Yes -49 0.24 No 21 34.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 35211416 + NM_000610 CD44 1 0.02 0.18 10 2.23 78.53 27 6.41 Yes 44 0.58 No 32 0.28 Yes -26 0.9 Yes 44 85.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 35243251 + NM_000610 CD44 1 0.04 0.26 15 7.56 90.13 44 7.7 Yes 31 0.93 Yes 32 0.27 Yes -43 0.71 Yes 27 69.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 35243263 + NM_000610 CD44 1 0.04 0.29 17 4.76 0 16 4.04 No 43 0.91 Yes 0 0 No -22 0.65 No 48 81.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 35208348 + NM_000610 CD44 1 0.01 0.14 8 8.58 84.86 29 5.32 No 0 1.17 Yes 23 0.89 Yes -28 0.6 No 42 52.62 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 35209692 + NM_000610 CD44 1 0.02 0.19 12 9.43 84.43 19 5.57 Yes 68 2.29 Yes 0 0 No -27 0.71 Yes 43 56.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 35211416 + NM_000610 CD44 1 0.02 0.11 7 2.23 78.53 27 6.41 Yes 44 0.58 No 32 0.28 Yes -26 0.9 Yes 44 85.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 35239519 + NM_000610 CD44 1 0.03 0.22 13 8.49 97.24 25 4.7 No 74 -2.01 No 0 0 No -24 0.74 Yes 46 70.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 35240843 + NM_000610 CD44 1 0.04 0.29 13 -2.58 69.92 32 6.63 Yes 40 -3.66 No 23 0.84 Yes -31 0.47 No 39 69.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 35243921 + NM_000610 CD44 1 0.3 2.85 57 1.86 64.66 31 9.22 Yes 21 0.78 Yes 33 0.77 Yes -34 0.52 No 37 60.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 35250677 + NM_000610 CD44 1 0.04 0.35 18 -14.73 0 29 6.17 Yes 16 0.76 No 0 0 No -28 0.87 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 207934595 + NM_002389 CD46 1 0.12 0.36 26 -1.31 82.97 54 6.91 Yes 41 2.41 Yes 0 0 No -35 0.29 No 35 46.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 207943672 + NM_002389 CD46 1 0.06 0.11 8 1.92 0 10 4 No 49 0.23 No 28 0.51 Yes -31 0.58 No 39 81.85 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 207948954 + NM_002389 CD46 1 0.14 0.38 17 10.09 86.06 40 9.23 Yes 27 1.64 Yes 0 0 No -34 0.58 No 36 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 207959000 + NM_002389 CD46 1 0.46 1.28 52 9.42 84.59 21 5.57 Yes 8 0.82 Yes 24 0.79 Yes -24 0.78 Yes 46 71.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 107769446 - NM_198793 CD47 1 0.05 0.15 9 -1.77 0 55 7.71 Yes 76 -2.13 No 0 0 No -32 0.5 No 32 48.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 107769450 - NM_198793 CD47 1 14.61 41.54 72 8.28 81.32 51 7.51 Yes 72 -2.13 No 28 0.6 Yes -28 0.58 No 42 47.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 107770501 - NM_198793 CD47 1 0.05 0.13 9 4.5 77.16 26 6.24 Yes 46 1.69 Yes 0 0 No -25 0.69 Yes 45 80.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 107770600 - NM_198793 CD47 1 0.11 0.35 20 7.4 77.54 24 6.43 Yes 11 0.18 No 0 0 No -29 0.56 No 41 79.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 107773063 - NM_198793 CD47 1 0.03 0.11 7 9.43 87.64 31 5.65 Yes 22 0.03 No 0 0 No -31 0.58 No 47 59.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 107773196 - NM_198793 CD47 1 0.14 0.49 24 8.89 95.02 17 4.78 No 32 1.65 Yes 0 0 No -19 0.69 Yes 51 83.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 107774414 - NM_198793 CD47 1 0.71 2.28 63 4.06 85.26 30 5.36 No 42 1.06 Yes 29 0.78 Yes -29 0.75 Yes 41 76.23 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 107776381 - NM_198793 CD47 1 1.03 3.89 67 9.42 95.01 26 6.71 Yes 50 1.16 Yes 0 0 No -26 0.59 No 45 67.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 107777233 - NM_198793 CD47 1 0.11 0.39 21 6.75 87.61 34 7.25 Yes 21 1.69 Yes 21 0.9 Yes -33 0.83 Yes 37 89.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 107809187 - NM_198793 CD47 1 0.42 0.78 43 3.44 63.76 40 6.56 Yes 27 0.05 No 0 0 No -37 0.63 No 31 52.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160652072 - NM_001256030 CD48 1 0.01 0.21 12 11.54 88.27 36 6.02 Yes 48 0.32 No 0 0 No -35 0.66 No 35 66.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160652646 - NM_001256030 CD48 1 0.05 0.93 42 -7.61 0 13 4.12 No 41 0.34 No 0 0 No -12 0.55 No 58 19.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160652690 - NM_001256030 CD48 1 0 0.11 8 6.32 85.21 20 5.1 No 49 1.17 Yes 0 0 No -19 0.56 No 41 43.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160680304 - NM_001256030 CD48 1 0.82 11.54 71 10.83 86.34 32 4.9 No 1 1.94 Yes 0 0 No -31 0.58 No 39 77.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 26645018 + NM_001803 CD52 1 0.24 2.74 70 6.8 81.96 20 6.1 Yes 7 2.33 Yes 19 0.89 Yes -19 0.66 Yes 51 65.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 26645071 + NM_001803 CD52 1 0.01 0.14 8 6.75 86.55 13 4.68 No 60 2.27 Yes 0 0 No -20 0.63 No 52 34.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 26646628 + NM_001803 CD52 1 0.01 0.13 9 -6.36 33.6 31 5.9 Yes 26 0.42 No 26 0.86 Yes -16 0.4 No 40 24.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 111419774 + NM_000560 CD53 1 0.11 1.15 42 8.86 81.89 18 6.19 Yes 5 0.77 Yes 0 0 No -24 0.9 Yes 46 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111434265 + NM_000560 CD53 1 0.04 0.42 20 9.92 86.55 28 5.38 No 12 0.8 Yes 0 0 No -27 0.71 Yes 43 79.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111434431 + NM_000560 CD53 1 0.09 1.13 46 11.31 86.62 33 6.24 Yes 20 1.01 Yes 0 0 No -32 0.93 Yes 38 91.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111434941 + NM_000560 CD53 1 0.03 0.31 13 5.29 89.54 15 3.83 No 48 0.5 No 27 0.8 Yes -21 0.46 No 49 67.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 111436918 + NM_000560 CD53 1 0.01 0.13 8 -8.98 0 15 4.58 No 17 -1.25 No 24 0.21 Yes -17 0.27 No 15 24.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 111439280 + NM_000560 CD53 1 0.09 0.76 30 -1.03 0 9 3.87 No 25 2 Yes 0 0 No -37 0.78 Yes 33 94.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111440446 + NM_000560 CD53 1 0.02 0.28 19 -5.36 65.17 19 4.99 No 21 1.02 Yes 0 0 No -33 0.74 Yes 37 51.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 111440450 + NM_000560 CD53 1 0.02 0.15 11 -11.27 0 23 5.36 No 25 1.02 Yes 0 0 No -37 0.74 Yes 23 34.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 111441937 + NM_000560 CD53 1 0.01 0.21 13 14.27 88.11 29 6.34 Yes 16 0.95 Yes 0 0 No -23 0.54 No 36 55.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 111441747 + NM_000560 CD53 1 0.03 0.42 25 -22.15 0 35 5.55 No 66 -1.39 No 0 0 No -37 0.74 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 111441937 + NM_000560 CD53 1 0.02 0.25 15 14.27 88.11 29 6.34 Yes 16 0.95 Yes 0 0 No -23 0.54 No 36 55.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 207497978 + NM_001114752 CD55 1 0.12 0.13 9 3.44 80.5 20 3.79 No 73 0.98 Yes 26 0.6 Yes -19 0.76 Yes 51 76.94 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 207498968 + NM_001114752 CD55 1 0.15 0.13 8 -3.95 78.58 43 5.94 Yes 76 0.82 Yes 0 0 No -34 0.39 No 36 52.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 207500140 + NM_001114752 CD55 1 0.48 0.46 21 7.43 96.31 26 5.1 No 64 0.96 Yes 0 0 No -25 0.5 No 51 62.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 207513731 + NM_001114752 CD55 1 4.88 0.29 14 0.95 83.95 21 6.47 Yes 61 0.99 Yes 24 0.45 Yes -47 0.45 No 23 72.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 117061890 - NR_026665 CD58 1 1740.25 268.07 72 10.7 89.42 29 5.01 No 50 2.07 Yes 24 0.87 Yes -28 0.57 No 46 72.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 117063952 - NR_026665 CD58 1 0.95 0.14 7 6.07 71.29 28 5.45 No 56 0.64 No 0 0 No -27 0.61 No 43 64.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 117075990 - NR_026665 CD58 1 0.06 0.24 17 11.69 97.46 19 5.55 No 6 1.57 Yes 0 0 No -18 0.43 No 52 72.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 33733052 - NM_000611 CD59 1 0.13 0.63 30 8.4 87.44 26 7.42 Yes 13 1.42 Yes 25 0.89 Yes -25 0.93 Yes 45 93.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 33739011 - NM_000611 CD59 1 0.03 0.15 9 -1.79 0 15 4 No 14 1.87 Yes 0 0 No -26 0.41 No 44 87.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 33753015 - NM_000611 CD59 1 9.33 33.85 72 7.6 81.41 24 6.66 Yes 11 1.58 Yes 23 0.75 Yes -23 0.69 Yes 47 71.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 33755157 - NM_000611 CD59 1 0.88 3.08 67 1.04 0 35 5.26 No 13 0.76 No 28 0.69 Yes -38 0.41 No 42 50.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 33755161 - NM_000611 CD59 1 0.06 0.18 11 1.36 83.86 31 5.06 No 9 0.76 No 28 0.69 Yes -34 0.37 No 46 44.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56120748 - NM_001257389 CD63 1 0.04 0.1 7 -11.71 0 25 6.68 Yes 12 0.94 Yes 23 0.82 Yes -24 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 56121055 - NM_001257389 CD63 1 0.03 0.13 8 -2.56 0 19 4.5 No 74 1.71 Yes 18 0.91 Yes -18 0.81 Yes 52 43.53 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 9907265 - NM_001781 CD69 1 0.57 0.65 32 2.84 64.45 25 5.33 No 36 0.75 No 0 0 No -48 0.33 No 22 80.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 6586286 - NM_001252 CD70 1 1.87 17.49 72 4.44 79.12 27 7.14 Yes 14 -0.96 No 0 0 No -26 0.74 Yes 44 78.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 6586286 - NM_001252 CD70 1 0.02 0.19 12 4.44 79.12 27 7.14 Yes 14 -0.96 No 0 0 No -26 0.74 Yes 44 78.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 6586464 - NM_001252 CD70 1 0.27 2.58 66 5.3 77.39 49 9.09 Yes 36 2.32 Yes 0 0 No -28 0.5 No 22 58.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 6586643 - NM_001252 CD70 1 0.04 0.4 24 7.91 86.87 19 7.07 Yes 6 1.84 Yes 0 0 No -18 0.53 No 52 80.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 6586800 - NM_001252 CD70 1 0.03 0.28 15 4.06 0 34 7 Yes 21 2.62 Yes 0 0 No -33 0.89 Yes 37 94.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6588928 - NM_001252 CD70 1 0.09 0.88 36 3.93 82.9 16 5.38 No 45 1.16 Yes 0 0 No -23 0.85 Yes 47 72.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6589050 - NM_001252 CD70 1 0.1 0.93 35 11.01 85.46 29 7.36 Yes NA NA NA 0 0 No -25 0.64 No 45 82.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 35610281 - NM_001782 CD72 1 1.32 0.29 11 -2.97 63.81 12 5.09 No 22 1.69 Yes 0 0 No -38 0.94 Yes 32 93.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149781584 - NM_001025158 CD74 1 0.3 33.14 72 7.6 84.38 19 5.87 Yes 70 -2.28 No 21 0.83 Yes -22 0.85 Yes 36 40.69 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 149781736 - NM_001025158 CD74 1 0.02 1.85 59 7.2 86.4 23 5.2 No 35 0.03 No 0 0 No -20 0.88 Yes 50 87.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 149782876 - NM_001025158 CD74 1 8.48 2.25 63 4.8 79.42 35 5.27 No 22 1.74 Yes 30 0.94 Yes -30 0.8 Yes 40 90.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 149784331 - NM_001025158 CD74 1 3.47 0.89 37 7.57 78.97 24 7.62 Yes 11 1.96 Yes 23 0.95 Yes -23 0.85 Yes 47 88.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 149784726 - NM_001025158 CD74 1 3.59 1.03 46 2.09 76.97 12 5.2 No -1 1.37 Yes 0 0 No -48 0.43 No 22 74.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 149784743 - NM_001025158 CD74 1 1.62 0.44 23 -12.87 0 32 7 Yes 19 0.74 No 0 0 No -31 0.72 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 149784744 - NM_001025158 CD74 1 49140.04 13261.38 72 7.85 77.68 31 6.93 Yes 18 0.74 No 30 0.65 Yes -30 0.73 Yes 40 76.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 149784744 - NM_001025158 CD74 1 0.5 0.13 8 7.85 77.68 31 6.93 Yes 18 0.74 No 30 0.65 Yes -30 0.73 Yes 40 76.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 149784787 - NM_001025158 CD74 1 0.53 0.14 10 5.39 78.55 15 6.61 Yes 2 0.3 No 30 0.65 Yes -21 0.83 Yes 49 88.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 149784836 - NM_001025158 CD74 1 0.4 0.11 8 5.74 79.33 10 5.2 No 66 1.65 Yes 0 0 No -20 0.71 Yes 50 81.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149785235 - NM_001025158 CD74 1 1.5 0.42 21 5.42 79.48 54 7.68 Yes 41 0.6 No 23 0.7 Yes -23 0.53 No 17 70.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 149785876 - NM_001025158 CD74 1 0 0.39 21 0.4 0 14 4.24 No 21 2.06 Yes 0 0 No -33 0.86 Yes 37 72.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149785884 - NM_001025158 CD74 1 0.01 1.42 52 -12.51 0 26 6.48 Yes 13 2.09 Yes 0 0 No -25 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 149785976 - NM_001025158 CD74 1 0 0.18 11 1.11 74.79 22 4.9 No 56 0.32 No 0 0 No -21 0.92 Yes 49 87.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 149786879 - NM_001025158 CD74 1 0 0.31 15 -6.86 0 14 4.24 No 21 2.36 Yes 0 0 No -33 0.91 Yes 37 88.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149790669 - NM_001025158 CD74 1 0 0.11 7 9.46 88.19 32 5.52 No 51 0.88 Yes 0 0 No -31 0.38 No 40 49.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 149790710 - NM_001025158 CD74 1 0 0.29 19 5.57 90.13 23 5.56 Yes 10 0.89 Yes 0 0 No -22 0.76 Yes 48 83.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42382823 + NM_001783 CD79A 1 0.01 0.19 11 9.83 92.42 16 5.29 No 3 1.09 Yes 0 0 No -30 0.43 No 55 48.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 42383617 + NM_001783 CD79A 1 0.02 0.25 17 -0.07 0 21 4.05 No 22 0.96 Yes 0 0 No -34 0.87 Yes 36 74.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 62006667 - NM_021602 CD79B 1 0.07 0.22 14 -1.74 67.03 21 5.2 No 27 -1.82 No 0 0 No -39 0.74 Yes 31 69.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 62007658 - NM_021602 CD79B 1 0.4 0.14 9 3.24 70.12 30 5.46 No 38 -3.32 No 0 0 No -29 0.76 Yes 41 48.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 62007704 - NM_021602 CD79B 1 0.38 0.14 8 -1.29 71.45 12 4.8 No 76 -2.68 No 0 0 No -18 0.43 No 52 54.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 62007746 - NM_021602 CD79B 1 589.71 227.42 72 8.69 83.88 23 5.39 No 34 -2.72 No 22 0.94 Yes -22 0.75 Yes 48 87.08 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62007884 - NM_021602 CD79B 1 1.97 0.83 36 3.71 71.02 32 6.69 Yes 19 1.48 Yes 40 0.48 Yes -31 0.97 Yes 39 97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62008749 - NM_021602 CD79B 1 113.66 126.24 72 4.28 82.21 30 6.63 Yes 17 2.06 Yes 29 0.96 Yes -29 0.9 Yes 41 87.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 119249570 - NM_005191 CD80 1 0.07 0.13 9 10.62 87.47 26 6.36 Yes 13 0.55 No 0 0 No -26 0.83 Yes 44 81.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119251856 - NM_005191 CD80 1 2.31 4.94 69 6.42 77.39 43 6.85 Yes -4 0.64 No 0 0 No -42 0.5 No 28 61.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 119251979 - NM_005191 CD80 1 0.29 0.6 28 8.85 83.56 39 5.45 No 7 1.29 Yes 0 0 No -38 0.63 No 51 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 119254661 - NM_005191 CD80 1 0.93 1.94 52 9.39 86.59 24 5.48 No 36 0.44 No 0 0 No -23 0.87 Yes 47 82.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119256176 - NM_005191 CD80 1 0.11 0.33 17 -0.74 0 16 4.24 No 75 1.56 Yes 0 0 No -20 0.32 No 50 66.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 119256185 - NM_005191 CD80 1 0.2 0.56 31 -3.63 76.86 20 5.64 Yes 66 1.56 Yes 0 0 No -33 0.35 No 37 48.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 119265553 - NM_005191 CD80 1 0.19 0.39 21 6.05 84.45 23 5.34 No 10 0.58 No 0 0 No -28 0.83 Yes 42 97.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119268634 - NM_005191 CD80 1 0.46 0.88 38 10.34 89.84 34 4.99 No 52 0.8 Yes 0 0 No -33 0.76 Yes 37 77.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119274856 - NM_005191 CD80 1 0.05 0.1 7 5.71 78.11 23 5.98 Yes 10 0.31 No 0 0 No -26 0.69 Yes 44 56.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 119277610 - NM_005191 CD80 1 0.23 0.54 16 4.74 84.41 35 4.63 No 63 0.73 No 0 0 No -24 0.48 No 46 50.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 2407784 + NM_004356 CD81 1 0.05 0.15 10 5.25 75.88 28 6.11 Yes 15 1.66 Yes 27 0.84 Yes -27 0.87 Yes 43 89.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 2414585 + NM_004356 CD81 1 0.04 0.15 9 11.42 91 31 6.92 Yes NA NA NA 0 0 No -22 0.6 No 48 84.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 2416078 + NM_004356 CD81 1 0.13 0.71 34 5 82.4 13 5.19 No 41 1.29 Yes 26 0.8 Yes -25 0.56 No 50 41.76 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 44587822 + NM_002231 CD82 1 0.46 3.25 61 6 72.28 26 7.14 Yes 13 1.73 Yes 25 0.96 Yes -25 0.96 Yes 45 93.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 44606692 + NM_002231 CD82 1 0.18 1.08 42 7.33 85.29 14 4.9 No 76 -1.7 No 24 0.56 Yes -29 0.6 No 46 61.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 44609259 + NM_002231 CD82 1 0.13 0.92 37 9.51 84.98 29 6.48 Yes 40 0.19 No 28 0.47 Yes -21 0.66 Yes 42 70.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 44616196 + NM_002231 CD82 1 0.1 0.72 36 1.14 0 33 6.9 Yes 20 1.67 Yes 0 0 No -32 0.93 Yes 38 90.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 44621743 + NM_002231 CD82 1 0.02 0.15 9 -3.9 0 22 5.66 Yes 45 1.74 Yes 0 0 No -57 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 44627217 + NM_002231 CD82 1 0.02 0.15 9 8.21 75.55 18 5.48 No 5 2.34 Yes 0 0 No -23 0.9 Yes 47 92.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 44629152 + NM_002231 CD82 1 0.02 0.17 9 4.88 77.74 19 3.72 No 20 0.97 Yes 0 0 No -24 0.96 Yes 46 97.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 44639717 + NM_002231 CD82 1 0.09 0.58 29 -5.11 0 9 3.87 No 26 0.13 No 0 0 No -29 0.45 No 41 59.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 44639810 + NM_002231 CD82 1 0.02 0.14 9 -3.41 0 28 5.1 No 20 0.9 Yes 36 0.28 Yes -32 0.71 Yes 36 66.19 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 14118882 + NM_004233 CD83 1 0.11 0.15 9 9.85 84.22 27 5.74 Yes 49 0.52 No 0 0 No -26 0.74 Yes 45 80.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 14121425 + NM_004233 CD83 1 0.17 0.26 15 1.56 0 32 5.46 No 19 0.21 No 0 0 No -31 0.75 Yes 39 76.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 14125185 + NM_004233 CD83 1 0.1 0.11 7 4.79 77.13 17 4.13 No 30 0.62 No 0 0 No -22 0.88 Yes 48 85.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 14133893 + NM_004233 CD83 1 0.07 0.19 14 1.27 72.8 18 4.76 No 14 1.12 Yes 0 0 No -37 0.8 Yes 33 90.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 14135341 + NM_004233 CD83 1 7.07 21.96 72 3.44 79.87 32 7.21 Yes 36 1.63 Yes 0 0 No -31 0.78 Yes 39 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 14135482 + NM_004233 CD83 1 0.06 0.24 12 -0.68 0 17 4.47 No 40 -4.36 No 0 0 No -16 0.77 Yes 54 62.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 160520637 - NM_001184879 CD84 1 1.81 0.38 22 6.69 81.17 36 6 Yes 71 0.67 No 0 0 No -21 0.62 No 35 56.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160545524 - NM_001184879 CD84 1 0.91 0.24 12 8.54 75.24 30 6.71 Yes 17 0.85 Yes 0 0 No -29 0.68 Yes 41 68.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 121799313 + NM_006889 CD86 1 1.72 1.35 49 11.25 84.91 34 6.71 Yes 21 0 No 0 0 No -33 0.49 No 43 58.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121799352 + NM_006889 CD86 1 2.43 1.93 51 8.13 86.59 33 6.22 Yes -2 -2.19 No 0 0 No -22 0.56 No 48 41.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121812638 + NM_006889 CD86 1 0.35 0.64 33 9.85 82.76 15 4.62 No 2 1.61 Yes 0 0 No -20 0.6 No 50 72.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 121828113 + NM_006889 CD86 1 0.1 0.19 11 -3.72 67.02 28 6.05 Yes 28 1.14 Yes 0 0 No -27 0.81 Yes 43 94.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121836854 + NM_006889 CD86 1 0.19 0.31 14 8.22 84.5 36 6.19 Yes 13 0.15 No 24 0.56 Yes -25 0.57 No 46 45.88 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 121838286 + NM_006889 CD86 1 0.1 0.17 9 -0.56 77.87 25 7.29 Yes 12 1.44 Yes 0 0 No -24 0.72 Yes 46 74.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6346975 + NM_001330312 CD9 1 0.27 0.11 7 10.85 86.9 36 5.41 No 62 1.93 Yes 0 0 No -29 0.89 Yes 41 91.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 149945444 - NM_001242614 CD99L2 1 0.22 0.13 7 0.65 64.96 52 7.36 Yes -3 0.45 No 0 0 No -41 0.77 Yes 29 76.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 149984929 - NM_001242614 CD99L2 1 0.27 0.18 12 1.51 73.48 24 5.03 No 74 1.53 Yes 23 0.91 Yes -23 0.82 Yes 47 85.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 149996842 - NM_001242614 CD99L2 1 8.71 4.64 70 1.88 77.89 22 4.58 No 51 1.73 Yes 0 0 No -21 0.52 No 49 57.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 150066444 - NM_001242614 CD99L2 1 0.71 0.18 11 2.77 76.92 25 5.47 No 53 1.95 Yes 0 0 No -24 0.88 Yes 46 82.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 49843833 + NR_036439 CDADC1 1 2.65 0.26 17 5.16 72.23 20 6.13 Yes 7 1.19 Yes 0 0 No -23 0.38 No 47 76.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 49866913 + NR_036439 CDADC1 1 1.63 0.18 12 11.25 85.43 27 5.65 Yes 60 1.27 Yes 0 0 No -26 0.65 No 51 61.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43017845 - NM_138477 CDAN1 1 2.52 0.53 30 5.83 79.07 16 5.16 No 65 0.48 No 29 0.39 Yes -20 0.36 No 50 50.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 43025369 - NM_138477 CDAN1 1 0.99 0.24 15 -5.64 75.03 26 4.94 No 26 0.85 Yes 0 0 No -25 0.83 Yes 45 70.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43026201 - NM_138477 CDAN1 1 1.33 0.29 15 6.46 87.83 18 4.8 No 53 2.01 Yes 0 0 No -21 0.54 No 53 79.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 43027526 - NM_138477 CDAN1 1 3.28 0.81 34 9.63 89.29 26 5.2 No NA NA NA 0 0 No -20 0.72 Yes 50 68.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 43027571 - NM_138477 CDAN1 1 0.62 0.17 11 -1.4 74.5 35 6.69 Yes 45 0.98 Yes 0 0 No -29 0.81 Yes 41 81.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43028280 - NM_138477 CDAN1 1 145.21 10.35 72 1.55 75.24 25 5.57 Yes 26 -2.77 No 27 0.69 Yes -24 0.85 Yes 46 70.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 43028280 - NM_138477 CDAN1 1 1.93 0.15 9 1.55 75.24 25 5.57 Yes 26 -2.77 No 27 0.69 Yes -24 0.85 Yes 46 70.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 12241473 + NM_006023 CDC123 1 0.04 0.25 15 5.34 72.99 64 8.48 Yes 51 2.54 Yes 0 0 No -23 0.69 Yes 47 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12259296 + NM_006023 CDC123 1 0.03 0.17 11 7.53 86.02 26 5.86 Yes 39 0.82 Yes 0 0 No -25 0.76 Yes 45 85.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12260625 + NM_006023 CDC123 1 0.05 0.29 16 8.1 75.91 26 7 Yes 13 1.1 Yes 0 0 No -25 0.83 Yes 45 64.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 12266987 + NM_006023 CDC123 1 0.05 0.26 14 5.91 77.84 40 7.21 Yes 27 1.61 Yes 0 0 No -39 0.68 Yes 31 78.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12272922 + NM_006023 CDC123 1 0.04 0.26 10 -7.66 0 15 3.87 No 58 0.35 No 26 0.81 Yes -14 0.44 No 56 53.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 12273871 + NM_006023 CDC123 1 0.04 0.18 13 0.08 0 9 3.87 No 59 1.74 Yes 0 0 No -41 0.43 No 36 56.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12276797 + NM_006023 CDC123 1 0.03 0.21 13 8.59 93.31 28 5.29 No 46 0.91 Yes 0 0 No -27 0.64 No 12 72.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 12277242 + NM_006023 CDC123 1 0.25 1.4 50 9.02 91.2 19 5.02 No 62 -1.99 No 0 0 No -18 0.59 No 52 66.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 12277293 + NM_006023 CDC123 1 0.02 0.14 9 2.81 84.63 26 5.09 No 27 1.37 Yes 0 0 No -25 0.68 Yes 45 82.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12292312 + NM_006023 CDC123 1 0.21 0.71 32 -2.66 74.77 29 7.14 Yes 16 1.03 Yes 0 0 No -28 0.73 Yes 36 57.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 100857916 + NM_001319211 CDC14A 1 0.95 0.14 8 10.13 98.14 23 5.33 No 10 0.3 No 0 0 No -23 0.44 No 48 52.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100901688 + NM_001319211 CDC14A 1 3.12 0.51 24 7.3 81.96 33 6.04 Yes 13 2.13 Yes 0 0 No -25 0.45 No 45 50.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 100922523 + NM_001319211 CDC14A 1 0.94 0.24 13 5.8 80.27 59 7.13 Yes 12 1.47 Yes 0 0 No -24 0.55 No 46 66.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 100951381 + NM_001319211 CDC14A 1 1.28 0.19 13 6.82 92.23 14 5.1 No 69 0.25 No 0 0 No -19 0.5 No 51 59.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 115001194 + NM_001078645 CDC16 1 0.18 0.19 9 10.53 93.26 46 6.61 Yes 6 0.44 No 0 0 No -29 0.62 No 41 84.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 115002276 + NM_001078645 CDC16 1 0.43 0.56 30 0.97 75.79 31 9.44 Yes 72 2.12 Yes 27 0.92 Yes -23 0.64 No 40 71.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 115002276 + NM_001078645 CDC16 1 9 12.39 72 0.97 75.79 31 9.44 Yes 72 2.12 Yes 27 0.92 Yes -23 0.64 No 40 71.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 115004784 + NM_001078645 CDC16 1 0.32 0.57 32 5.05 74.55 29 6.89 Yes 47 -1.9 No 28 0.47 Yes -29 0.4 No 34 44.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 115004787 + NM_001078645 CDC16 1 0.17 0.32 18 0.83 72.1 32 7.08 Yes 50 -1.89 No 28 0.85 Yes -32 0.39 No 31 44.1 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 115008733 + NM_001078645 CDC16 1 0.06 0.1 7 -16 0 35 4.63 No 2 1.47 Yes 0 0 No -37 0.59 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 115008737 + NM_001078645 CDC16 1 0.2 0.31 16 -5.61 0 16 3.69 No 6 1.46 Yes 0 0 No -41 0.58 No 29 64.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 115008762 + NM_001078645 CDC16 1 0.38 0.57 28 0.29 72.92 34 4.43 No 31 1.5 Yes 0 0 No -33 0.5 No 37 36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 115009321 + NM_001078645 CDC16 1 0.13 0.22 10 1.23 0 26 5.04 No 13 0.88 Yes 25 0.79 Yes -25 0.91 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 115012421 + NM_001078645 CDC16 1 0.19 0.29 17 5.37 84.49 19 5 No 73 1.25 Yes 0 0 No -26 0.7 Yes 44 56.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 115028357 + NM_001078645 CDC16 1 0.12 0.28 16 -1.94 0 24 6.12 Yes 11 0.97 Yes 0 0 No -31 0.59 No 39 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 115037752 + NM_001078645 CDC16 1 0.28 0.58 26 5.99 78.09 33 6.66 Yes 20 0.54 No 0 0 No -32 0.8 Yes 38 76.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 115028357 + NM_001078645 CDC16 1 0.1 0.22 15 -1.94 0 24 6.12 Yes 11 0.97 Yes 0 0 No -31 0.59 No 39 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 115037752 + NM_001078645 CDC16 1 0.07 0.14 10 5.99 78.09 33 6.66 Yes 20 0.54 No 0 0 No -32 0.8 Yes 38 76.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 115031310 + NM_001078645 CDC16 1 0.05 0.1 7 2.59 84.41 24 4.03 No 27 2.19 Yes 0 0 No -23 0.5 No 46 60.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 115035037 + NM_001078645 CDC16 1 0.94 1.78 52 5.8 91.27 20 4.9 No 7 0.25 No 0 0 No -19 0.94 Yes 51 95.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 115037645 + NM_001078645 CDC16 1 0.15 0.28 17 5.2 77.6 31 4.69 No 18 0.68 No 20 0.89 Yes -30 0.75 Yes 40 91.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 115037664 + NM_001078645 CDC16 1 0.2 0.36 21 -2.74 0 9 3.87 No 14 0.68 No 0 0 No -26 0.86 Yes 44 88.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 115037752 + NM_001078645 CDC16 1 2.41 4.4 67 5.99 78.09 33 6.66 Yes 20 0.54 No 0 0 No -32 0.8 Yes 38 76.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43825404 + NM_001255 CDC20 1 0.05 0.15 10 -7.62 0 17 4.24 No 47 1.66 Yes 18 0.42 Yes -42 0.43 No 28 64.72 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 43827852 + NM_001255 CDC20 1 0.06 0.22 13 2.54 71.27 34 5.05 No 76 -4.63 No 20 0.7 Yes -33 0.52 No 40 63.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 43827867 + NM_001255 CDC20 1 0.03 0.13 9 -21.63 0 23 4.9 No 37 -2.55 No 0 0 No -22 0.76 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 137525608 - NM_004661 CDC23 1 0.19 0.22 14 -2.8 0 37 6.22 Yes 24 0.93 Yes 21 0.7 Yes -36 0.55 No 34 51.33 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 137527241 - NM_004661 CDC23 1 0.16 0.21 15 -0.75 59.12 30 4.68 No 24 -3.31 No 21 0.91 Yes -29 0.5 No 41 42.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 137537158 - NM_004661 CDC23 1 0.19 0.25 17 -2.32 0 28 5.29 No 0 1.03 Yes 27 0.8 Yes -12 0.43 No 58 74.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 137542370 - NM_004661 CDC23 1 0.09 0.11 7 -0.9 0 28 5.34 No 66 0.69 No 23 0.92 Yes -27 0.91 Yes 43 97.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48209253 - NM_001789 CDC25A 1 0.17 0.21 13 10.31 88.89 20 5.08 No 7 1.3 Yes 0 0 No -19 0.85 Yes 51 91.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48215907 - NM_001789 CDC25A 1 0.61 0.65 27 9.23 77.35 20 5.89 Yes 7 1.34 Yes 0 0 No -29 0.66 No 42 40.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 48224518 - NM_001789 CDC25A 1 38.68 33.78 72 2.58 80.71 30 6.51 Yes 38 1.08 Yes 27 0.85 Yes -30 0.58 No 40 58.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 3781389 + NM_001287524 CDC25B 1 1738.97 117.61 72 10.58 78.26 35 6.93 Yes 22 0.77 Yes 34 0.81 Yes -34 0.87 Yes 36 87.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 3782587 + NM_001287524 CDC25B 1 0.1 0.13 7 3.33 79.6 20 3.89 No 23 2.35 Yes 0 0 No -35 0.61 No 35 48.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 3782629 + NM_001287524 CDC25B 1 0.13 0.15 9 9.18 83.25 41 6.37 Yes 65 2.36 Yes 0 0 No -34 0.86 Yes 36 82.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3783376 + NM_001287524 CDC25B 1 1.09 1.38 54 8.73 81.01 44 5.62 Yes 31 1.03 Yes 43 0.71 Yes -36 0.68 Yes 27 67.54 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 137626379 - NM_001287583 CDC25C 1 1.57 0.28 17 4.33 81.01 18 6.16 Yes 5 0.93 Yes 0 0 No -31 0.36 No 39 33.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 116033218 - NM_139286 CDC26 1 1.26 1.61 55 11.99 90.41 35 7.28 Yes 22 2.34 Yes 0 0 No -34 0.85 Yes 36 91.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 116034801 - NM_139286 CDC26 1 1.98 4.14 71 7.26 70.15 26 5.43 No 63 0.75 No 0 0 No -25 0.77 Yes 45 80.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 116035691 - NM_139286 CDC26 1 8.01 8.86 65 8.3 83.91 23 6.01 Yes 10 0.93 Yes 0 0 No -22 0.75 Yes 48 76.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 116036906 - NM_139286 CDC26 1 0.22 0.18 12 6.91 87.21 27 6.54 Yes 14 0.58 No 0 0 No -26 0.77 Yes 44 49.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 45198433 - NM_001293091 CDC27 1 0.08 0.19 10 7.81 76.36 37 6.53 Yes 10 0.76 No 0 0 No -36 0.42 No 34 43.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 45199846 - NM_001293091 CDC27 1 0.06 0.11 7 6.28 85.45 19 4.65 No 73 1.31 Yes 0 0 No -18 0.49 No 52 54.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 45199903 - NM_001293091 CDC27 1 3.47 8.19 72 5.16 63.29 29 7.47 Yes 16 1.34 Yes 28 0.83 Yes -28 0.9 Yes 42 90.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45199986 - NM_001293091 CDC27 1 1.52 3.57 70 -1.51 50.55 22 5.18 No 72 0.2 No 21 0.9 Yes -14 0.49 No 49 79.18 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 45216273 - NM_001293091 CDC27 1 0.06 0.11 7 7.15 82.61 30 5.87 Yes 45 1.03 Yes 20 0.95 Yes -23 0.22 No 42 33.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 45217340 - NM_001293091 CDC27 1 0.16 0.31 18 8.91 84.48 46 8.02 Yes 33 1.09 Yes 38 0.35 Yes -45 0.45 No 25 61.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 45219389 - NM_001293091 CDC27 1 79.11 83.89 72 5.49 85.37 24 5.26 No 59 0.88 Yes 20 0.76 Yes -23 0.82 Yes 47 64.99 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 45221622 - NM_001293091 CDC27 1 0.05 0.17 10 6.6 88.92 35 6.13 Yes 22 1.33 Yes 0 0 No -34 0.68 Yes 36 76.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45227318 - NM_001293091 CDC27 1 0.08 0.21 14 9.85 87.56 36 6.16 Yes 42 0.14 No 0 0 No -35 0.62 No 35 69.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 45229237 - NM_001293091 CDC27 1 0.12 0.31 17 7.19 88.05 19 4.9 No 40 -0.55 No 0 0 No -22 0.84 Yes 48 79.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 45229303 - NM_001293091 CDC27 1 7.23 17.57 72 2.11 66.67 31 4.84 No 25 -3.33 No 30 0.61 Yes -30 0.57 No 55 39.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 45232231 - NM_001293091 CDC27 1 1.32 2.85 65 10.44 84.31 24 5.96 Yes 11 1.4 Yes 23 0.9 Yes -23 0.69 Yes 47 85.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45234350 - NM_001293091 CDC27 1 3.92 6.11 71 9.89 85 16 5.61 Yes 32 0.97 Yes 28 0.57 Yes -28 0.55 No 48 44.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 45234507 - NM_001293091 CDC27 1 0.45 0.67 34 1.04 62.09 28 5.61 Yes 74 0.55 No 25 0.78 Yes -27 0.59 No 43 65.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 45249000 - NM_001293091 CDC27 1 0.83 0.11 8 9.74 91.33 32 7.72 Yes 45 1.28 Yes 0 0 No -28 0.79 Yes 42 75.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45249380 - NM_001293091 CDC27 1 4.27 0.58 27 4.79 87.9 45 6.71 Yes 73 0.69 No 0 0 No -26 0.9 Yes 44 82.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 45249431 - NM_001293091 CDC27 1 1742.77 209.82 72 6.68 76.97 35 4.93 No 66 1.34 Yes 28 0.27 Yes -34 0.42 No 42 60.03 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 45249431 - NM_001293091 CDC27 1 1.2 0.17 7 6.68 76.97 35 4.93 No 66 1.34 Yes 28 0.27 Yes -34 0.42 No 42 60.03 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 45266304 - NM_001293091 CDC27 1 0.07 0.15 8 5.11 76.09 40 5.97 Yes 27 0.9 Yes 31 0.82 Yes -39 0.61 No 31 70.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 538677 + NM_004359 CDC34 1 3.68 4.33 72 10.21 88.89 25 8.26 Yes 12 0.55 No 24 0.45 Yes -31 0.46 No 39 63.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 541183 + NM_004359 CDC34 1 0.09 0.13 7 -7.62 74.88 17 6.2 Yes 69 1.19 Yes 32 0.36 Yes -32 0.43 No 38 80.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 541342 + NM_004359 CDC34 1 2.57 3.17 70 -2.25 0 24 7.14 Yes 11 1.98 Yes 19 0.84 Yes -23 0.92 Yes 47 91.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 541345 + NM_004359 CDC34 1 1.33 1.53 57 -3.41 0 10 4 No 14 1.98 Yes 19 0.84 Yes -26 0.9 Yes 44 91.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10503374 - NM_007065 CDC37 1 0.03 0.13 8 -6.49 0 9 3.87 No 21 0.72 No 0 0 No -33 0.86 Yes 37 88.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10504114 - NM_007065 CDC37 1 0.14 0.65 37 -1.68 0 26 5.66 Yes 13 0.4 No 21 0.46 Yes -25 0.68 Yes 45 69.17 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 10505915 - NM_007065 CDC37 1 0.03 0.19 12 2.31 64.05 28 6.28 Yes 7 -1.38 No 0 0 No -27 0.82 Yes 43 62.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 10506044 - NM_007065 CDC37 1 0.02 0.11 8 -0.22 0 13 4.36 No 65 -3.85 No 23 0.37 Yes -31 0.67 Yes 39 53.81 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 10506373 - NM_007065 CDC37 1 3.62 18.68 72 7.02 75.79 39 8.08 Yes 0 0.5 No 29 0.74 Yes -29 0.33 No 41 55.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 10511366 - NM_007065 CDC37 1 0.4 1.51 55 5.1 0 35 6.4 Yes 34 0.56 No 0 0 No -35 0.71 Yes 35 67.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 10511370 - NM_007065 CDC37 1 0.05 0.17 9 3.75 84.41 31 6.08 Yes 30 0.57 No 28 0.39 Yes -31 0.71 Yes 39 67.66 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 4690889 + NM_017913 CDC37L1 1 0.49 0.4 20 4.79 64.23 29 5.89 Yes 16 1.02 Yes 0 0 No -37 0.7 Yes 42 72.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 110502432 + NM_015891 CDC40 1 1.17 1.15 45 3.21 75.59 31 5.94 Yes 18 0.67 No 0 0 No -34 0.55 No 36 58.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 110514388 + NM_015891 CDC40 1 0.18 0.15 8 -2.88 0 29 6.52 Yes 16 0.85 Yes 0 0 No -28 0.84 Yes 42 82.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 110532985 + NM_015891 CDC40 1 0.55 0.69 36 7.25 86.13 61 7.25 Yes 16 1.67 Yes 0 0 No -29 0.55 No 41 65.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 110540571 + NM_015891 CDC40 1 0.21 0.24 13 -1.57 0 26 5.13 No 72 0.89 Yes 0 0 No -25 0.7 Yes 45 70.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 22390966 + NM_001039802 CDC42 1 1.14 0.21 14 4.39 85.02 17 6.84 Yes 4 1.4 Yes 0 0 No -29 0.74 Yes 41 64.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 22405198 + NM_001039802 CDC42 1 0.07 0.96 38 7.97 80.5 42 10.17 Yes 29 1.44 Yes 41 0.62 Yes -41 0.73 Yes 29 87.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 22405239 + NM_001039802 CDC42 1 0.04 0.56 29 4.99 73.79 45 5.71 Yes 70 1.4 Yes 0 0 No -28 0.9 Yes 42 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 22416435 + NM_001039802 CDC42 1 1.34 26.26 72 9.03 80.69 40 7.8 Yes 27 2.31 Yes 39 0.79 Yes -39 0.74 Yes 31 92.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 22417888 + NM_001039802 CDC42 1 0.07 1.42 52 1.58 62.44 78 9.67 Yes 65 0.99 Yes 25 0.56 Yes -23 0.37 No 47 45.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 22417921 + NM_001039802 CDC42 1 0.02 0.31 18 -11.61 0 42 6.47 Yes 29 0.64 No 0 0 No -35 0.43 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 22417924 + NM_001039802 CDC42 1 0.31 6.04 72 -0.83 0 45 6.7 Yes 32 0.64 No 0 0 No -38 0.52 No 41 59.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 227198765 - NM_003607 CDC42BPA 1 0.36 0.13 7 8.07 83.68 36 7.82 Yes 28 1.14 Yes 35 0.72 Yes -35 0.77 Yes 35 90.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 227223252 - NM_003607 CDC42BPA 1 0.35 0.11 8 1.88 71.69 26 5.11 No 49 -2.06 No 0 0 No -25 0.52 No 45 48.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 227272431 - NM_003607 CDC42BPA 1 0.15 0.1 7 3.11 57.67 42 6.86 Yes 23 0.25 No 0 0 No -35 0.63 No 29 77.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 227279237 - NM_003607 CDC42BPA 1 0.69 0.19 13 8.75 91.4 33 5.92 Yes 59 -2.89 No 0 0 No -22 0.68 Yes 48 77.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 227289633 - NM_003607 CDC42BPA 1 1.16 0.18 12 9.71 88.37 35 5.92 Yes 68 -3.89 No 0 0 No -28 0.53 No 42 61.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 227322036 - NM_003607 CDC42BPA 1 0.29 0.11 8 8.01 91.7 19 5.95 Yes 6 1.26 Yes 0 0 No -32 0.6 No 48 47.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 227387350 - NM_003607 CDC42BPA 1 0.49 0.28 15 3.07 0 28 6.29 Yes 56 0.88 Yes 0 0 No -27 0.69 Yes 43 64.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 103399537 - NM_006035 CDC42BPB 1 0.56 0.1 7 6.16 85.87 26 5.66 Yes 45 -2.11 No 0 0 No -25 0.76 Yes 45 66.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 103413003 - NM_006035 CDC42BPB 1 0.76 0.21 14 6.44 79.29 17 5.24 No 41 1.39 Yes 0 0 No -56 0.53 No 17 68.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 103422628 - NM_006035 CDC42BPB 1 0.51 0.17 11 6.62 80.87 47 5.8 Yes 19 1.12 Yes 0 0 No -31 0.81 Yes 39 77.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151026794 - NM_020239 CDC42SE1 1 0.12 0.46 26 4.91 0 36 6.16 Yes 23 0.59 No 0 0 No -35 0.94 Yes 35 98.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 151027606 - NM_020239 CDC42SE1 1 2.34 7.56 72 1.98 77.72 20 5.67 Yes 7 1 Yes 30 0.83 Yes -27 0.4 No 43 47.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 151027630 - NM_020239 CDC42SE1 1 0.09 0.29 18 -12.63 0 16 4.26 No 8 0.49 No 30 0.83 Yes -47 0.63 No 23 72.74 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 151027701 - NM_020239 CDC42SE1 1 0.19 0.64 30 9.59 89.49 28 6.75 Yes 27 0.57 No 0 0 No -27 0.5 No 43 46.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151029263 - NM_020239 CDC42SE1 1 13.03 25.56 72 5.74 72.38 16 6.32 Yes 34 -2.02 No 23 0.32 Yes -23 0.39 No 45 55.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 130600035 + NM_020240 CDC42SE2 1 0.1 0.17 10 12.37 93.29 22 5.29 No 9 1.27 Yes 0 0 No -21 0.85 Yes 49 92.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130622357 + NM_020240 CDC42SE2 1 0.2 0.32 18 9.25 86.16 28 6.32 Yes 29 0.99 Yes 0 0 No -27 0.71 Yes 43 82.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130623182 + NM_020240 CDC42SE2 1 0.42 0.63 29 4.52 0 27 5.71 Yes 39 0.12 No 0 0 No -38 0.54 No 32 54.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 130623351 + NM_020240 CDC42SE2 1 1.04 1.63 51 8.52 84.11 42 5.19 No 67 -1.07 No 0 0 No -35 0.87 Yes 35 89.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 130651672 + NM_020240 CDC42SE2 1 1.06 1.69 52 0.78 0 26 6.93 Yes 13 1 Yes 0 0 No -25 0.86 Yes 45 87.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130662490 + NM_020240 CDC42SE2 1 0.39 1.39 55 9.82 91.26 42 6.6 Yes 59 1.23 Yes 0 0 No -26 0.77 Yes 44 73.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130667424 + NM_020240 CDC42SE2 1 0.04 0.17 10 7.23 79.47 34 6.95 Yes 21 1.16 Yes 0 0 No -33 0.37 No 37 47.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 130679694 + NM_020240 CDC42SE2 1 0.05 0.18 11 6.19 75.96 62 6.22 Yes 19 0.63 No 0 0 No -31 0.43 No 39 64.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 130680797 + NM_020240 CDC42SE2 1 0.04 0.14 8 7.98 81.56 24 5.29 No 17 0.26 No 0 0 No -23 0.62 No 41 46.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 130690343 + NM_020240 CDC42SE2 1 0.52 1.89 57 10.17 86.44 32 7.03 Yes 19 1.56 Yes 31 0.85 Yes -31 0.91 Yes 39 95.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 130690347 + NM_020240 CDC42SE2 1 0.08 0.31 19 3.58 0 36 7.21 Yes 23 1.55 Yes 0 0 No -35 0.86 Yes 35 95.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130721240 + NM_020240 CDC42SE2 1 0.17 0.94 38 -2.38 0 39 5.53 No 18 0.75 No 0 0 No -30 0.83 Yes 40 83.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 130725273 + NM_020240 CDC42SE2 1 0.03 0.13 9 8.37 89.49 45 6.42 Yes 48 0.49 No 0 0 No -32 0.49 No 34 61.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 130727521 + NM_020240 CDC42SE2 1 0.47 0.43 23 9.48 92.08 27 5.19 No 14 0.12 No 0 0 No -26 0.64 No 44 78.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 130727503 + NM_020240 CDC42SE2 1 0.31 0.31 15 -1.43 58.08 23 4.69 No 76 0.04 No 0 0 No -22 0.82 Yes 48 27.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 130727521 + NM_020240 CDC42SE2 1 320.09 280.92 72 9.48 92.08 27 5.19 No 14 0.12 No 0 0 No -26 0.64 No 44 78.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 130727613 + NM_020240 CDC42SE2 1 1.22 1.04 49 -7.95 48.27 50 9.69 Yes 37 0.87 Yes 0 0 No -57 0.53 No 20 69.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 130727652 + NM_020240 CDC42SE2 1 2.54 2.22 64 6.05 78.31 36 6.93 Yes 76 0.87 Yes 0 0 No -35 0.71 Yes 35 81.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130729078 + NM_020240 CDC42SE2 1 0.54 0.54 24 9.38 91.2 18 5.34 No 5 0.51 No 22 0.65 Yes -22 0.7 Yes 48 65.55 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 19468208 + NM_001178011 CDC45 1 0.65 0.42 19 5.38 86.65 17 5.48 No 4 0.15 No 0 0 No -16 0.5 No 54 74.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 19470212 + NM_001178011 CDC45 1 741.19 97.19 72 9.19 90.62 23 6.15 Yes 72 -4.32 No 22 0.75 Yes -22 0.67 Yes 48 83.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 19470313 + NM_001178011 CDC45 1 1.15 0.14 10 7.9 73.35 38 6.25 Yes 55 0.51 No 0 0 No -37 0.37 No 33 55.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 19481852 + NM_001178011 CDC45 1 0.21 0.22 15 -10.55 68.42 93 10.7 Yes 41 -0.22 No 0 0 No -32 0.76 Yes 38 88.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 19481996 + NM_001178011 CDC45 1 0.19 0.19 11 9.25 89.71 15 7.94 Yes 2 1.86 Yes 27 0.65 Yes -29 0.47 No 43 68.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 19482015 + NM_001178011 CDC45 1 0.11 0.11 7 -1.54 0 22 5.28 No 21 1.82 Yes 21 0.86 Yes -21 0.52 No 49 84.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 19482029 + NM_001178011 CDC45 1 0.51 0.49 29 -0.18 68.09 22 4.79 No 35 1.82 Yes 21 0.86 Yes -21 0.83 Yes 49 72.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 19492918 + NM_001178011 CDC45 1 0.12 0.11 7 8.51 83.86 18 6.07 Yes 5 0.31 No 0 0 No -21 0.72 Yes 49 76.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 19494902 + NM_001178011 CDC45 1 0.22 0.29 15 7.03 89.97 31 6.08 Yes 39 -2.02 No 23 0.24 Yes -17 0.58 No 53 42.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 19494950 + NM_001178011 CDC45 1 0.09 0.1 7 5.26 80.18 26 5.34 No 43 0.97 Yes 0 0 No -25 0.6 No 48 59.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 19504291 + NM_001178011 CDC45 1 0.43 0.28 11 -4.1 51.46 31 6.08 Yes 39 0.32 No 0 0 No -51 0.62 No 19 65.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 19504303 + NM_001178011 CDC45 1 0.23 0.18 10 -0.28 0 9 4.58 No 51 0.33 No 21 0.23 Yes -42 0.65 No 28 74.76 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 19504336 + NM_001178011 CDC45 1 4.89 3.82 66 3.45 78.85 19 6.48 Yes NA NA NA 21 0.23 Yes -18 0.42 No 52 46.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 19504860 + NM_001178011 CDC45 1 0.39 0.38 19 7.95 73.13 27 5.57 Yes 76 -3.15 No 0 0 No -26 0.74 Yes 44 37.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 44366560 + NM_001253 CDC5L 1 0.16 0.28 15 10.15 76.2 24 7.98 Yes 11 1.39 Yes 0 0 No -23 0.62 No 38 66.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 44395029 + NM_001253 CDC5L 1 0.15 0.38 21 7.53 90.43 61 5.44 No 55 0.31 No 0 0 No -28 0.83 Yes 42 88.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 38449710 + NM_001254 CDC6 1 1.27 2.06 59 3.87 86.9 32 7 Yes 19 1.48 Yes 0 0 No -31 0.75 Yes 39 80.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38451832 + NM_001254 CDC6 1 0.35 0.58 25 5.17 91.71 35 4.3 No 54 0.84 Yes 0 0 No -34 0.82 Yes 36 93.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38452939 + NM_001254 CDC6 1 0.5 0.81 38 3.78 69.61 13 4.98 No 66 -2.4 No 22 0.87 Yes -18 0.63 No 52 90.02 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 38457692 + NM_001254 CDC6 1 0.11 0.15 10 1.24 76.47 22 5.08 No 36 0.39 No 32 0.85 Yes -22 0.75 Yes 48 72.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 91970651 + NM_001134420 CDC7 1 1.32 0.58 32 -1.89 66.46 23 5.2 No -3 0.45 No 0 0 No -22 0.95 Yes 48 96.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 91970656 + NM_001134420 CDC7 1 0.34 0.18 11 -4.85 0 28 5.66 Yes 2 0.12 No 0 0 No -27 0.95 Yes 43 89.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 91981298 + NM_001134420 CDC7 1 0.86 0.4 26 7.23 81.04 24 5.57 Yes 6 0.35 No 0 0 No -23 0.72 Yes 47 73.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 193091863 + NM_024529 CDC73 1 0.13 0.18 8 12.63 97.96 23 7.07 Yes 69 -1 No 0 0 No -22 0.75 Yes 48 84.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 193096977 + NM_024529 CDC73 1 0.27 0.36 20 3 0 30 6.71 Yes 17 1.31 Yes 29 0.85 Yes -29 0.97 Yes 41 97.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 193206837 + NM_024529 CDC73 1 0.17 0.21 14 -0.04 63.39 37 5.93 Yes 24 1.07 Yes 0 0 No -32 0.69 Yes 34 59.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 193216535 + NM_024529 CDC73 1 0.08 0.11 7 14.12 93.65 40 6.16 Yes 27 2.41 Yes 0 0 No -24 0.9 Yes 46 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 25317899 + NM_001317906 CDCA2 1 0.69 0.4 23 9.73 87.18 28 6.63 Yes 15 0.87 Yes 27 0.91 Yes -27 0.89 Yes 43 94.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 25319554 + NM_001317906 CDCA2 1 1.41 1.85 54 2.48 70.33 32 7.41 Yes 19 1.32 Yes 20 0.74 Yes -31 0.85 Yes 39 93.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 25329628 + NM_001317906 CDCA2 1 10.15 9.33 70 7.81 81.89 43 7.03 Yes 30 2.04 Yes 33 0.76 Yes -42 0.69 Yes 28 78.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 25337497 + NM_001317906 CDCA2 1 0.16 0.15 10 3.32 73.27 28 5.57 Yes 0 0.87 Yes 0 0 No -27 0.69 Yes 43 56.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 25337500 + NM_001317906 CDCA2 1 0.18 0.17 10 1.13 74.64 31 5.78 Yes 18 0.84 Yes 0 0 No -30 0.66 No 36 52.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 25341484 + NM_001317906 CDCA2 1 0.7 0.63 33 -0.47 68.33 40 5.89 Yes 10 0.76 No 0 0 No -33 0.32 No 42 40.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 25358546 + NM_001317906 CDCA2 1 0.45 0.5 24 11.75 93.38 28 5.53 No 15 0.2 No 0 0 No -27 0.76 Yes 43 86.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6958523 - NM_001331019 CDCA3 1 0.94 0.11 8 9.74 87.73 13 5.57 Yes 0 1.65 Yes 0 0 No -28 0.85 Yes 42 87.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6958578 - NM_001331019 CDCA3 1 42.56 3.85 65 1.28 70.14 24 5 No 22 1.43 Yes 18 0.51 Yes -23 0.57 No 47 55.73 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 6958594 - NM_001331019 CDCA3 1 931.84 90.71 72 6.04 86.81 19 6.61 Yes 6 1.47 Yes 18 0.51 Yes -19 0.78 Yes 51 61.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 6958829 - NM_001331019 CDCA3 1 1.12 0.9 38 9.68 84.7 18 4.9 No 5 0.86 Yes 0 0 No -17 0.44 No 53 57.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6958948 - NM_001331019 CDCA3 1 2.18 1.97 56 7.47 81.13 28 5.08 No 6 0.86 Yes 27 0.85 Yes -27 0.58 No 43 70.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 105486736 - NM_145701 CDCA4 1 0.16 0.15 9 6.51 73.77 25 5.57 Yes 38 -0.58 No 0 0 No -24 0.9 Yes 46 61.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 105486758 - NM_145701 CDCA4 1 1.29 1.07 36 7.26 82.7 29 5.29 No 16 -0.58 No 0 0 No -26 0.52 No 44 46.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64845231 - NM_080668 CDCA5 1 0.06 0.13 8 5.85 77.15 18 5.87 Yes 5 0.91 Yes 0 0 No -17 0.79 Yes 53 84.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64847022 - NM_080668 CDCA5 1 0.39 0.5 26 7.53 85.69 14 6.32 Yes 43 -0.46 No 31 0.21 Yes -33 0.74 Yes 37 82.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 174223442 + NM_031942 CDCA7 1 1.37 0.56 31 2.79 80.96 29 5.66 Yes 51 0.75 No 0 0 No -29 0.76 Yes 41 77.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 174228727 + NM_031942 CDCA7 1 4.92 2.82 64 8.55 73.82 27 7.68 Yes 14 1.06 Yes 26 0.89 Yes -26 0.71 Yes 44 84.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 21951370 - NM_001127370 CDCA7L 1 48.93 21.07 72 6.1 89.66 27 8.25 Yes 39 2.12 Yes 23 0.8 Yes -26 0.91 Yes 44 88.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 38169791 + NM_001256875 CDCA8 1 0.78 1.28 44 8.53 85.32 20 6.93 Yes 7 1.29 Yes 0 0 No -19 0.77 Yes 51 90.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4562949 - NM_001199054 CDIP1 1 0.29 0.14 9 7.28 89.93 20 4.9 No NA NA NA 19 0.53 Yes -19 0.42 No 51 62.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 62540520 + NM_001786 CDK1 1 0.24 0.96 42 6 76.04 41 6.5 Yes 15 0.59 No 0 0 No -36 0.7 Yes 34 83.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 62547841 + NM_001786 CDK1 1 0.12 0.38 20 5.38 78.72 21 4.5 No 33 1.92 Yes 0 0 No -45 0.28 No 25 79.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 62547864 + NM_001786 CDK1 1 0.17 0.76 30 6.85 85.15 28 5.66 Yes 56 1.91 Yes 0 0 No -25 0.69 Yes 45 85.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 62551880 + NM_001786 CDK1 1 0.13 0.68 33 3.22 78.15 28 5.21 No 15 0.09 No 27 0.61 Yes -27 0.81 Yes 43 85.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 62551907 + NM_001786 CDK1 1 0.03 0.18 10 -0.42 78.2 19 5.68 Yes 6 0.49 No 0 0 No -30 0.77 Yes 40 88.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89753996 + NM_001098533 CDK10 1 13.87 0.78 42 3.17 0 38 6.63 Yes 25 0.67 No 37 0.62 Yes -37 0.84 Yes 33 88.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89760835 + NM_001098533 CDK10 1 0.76 0.36 18 5.24 91.18 17 3.47 No 4 0.13 No 0 0 No -21 0.5 No 54 57.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89760976 + NM_001098533 CDK10 1 0.37 0.19 11 5.19 81.52 25 5.2 No 12 0.59 No 24 0.96 Yes -24 0.87 Yes 46 93.44 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89762136 + NM_001098533 CDK10 1 4.95 2.96 67 7.1 86.06 38 7.75 Yes 25 1.14 Yes 23 0.56 Yes -37 0.61 No 47 38.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 1635435 - NM_033529 CDK11A 1 23.56 5.6 71 9.3 82.61 26 5.66 Yes 13 1.2 Yes 25 0.94 Yes -25 0.9 Yes 45 89.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1654074 - NM_033529 CDK11A 1 5.92 8.75 71 8.27 82.1 28 5.64 Yes 1 0.97 Yes 27 0.8 Yes -27 0.66 No 43 73.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 1572216 - NM_001291345 CDK11B 1 0.78 0.47 25 8.52 79.93 26 5.66 Yes 13 1.19 Yes 0 0 No -25 0.9 Yes 45 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1572598 - NM_001291345 CDK11B 1 0.39 0.42 24 1.37 61.59 22 5.28 No 48 0.48 No 25 0.68 Yes -21 0.61 No 49 60.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 1572891 - NM_001291345 CDK11B 1 0.13 0.18 10 -1.01 0 12 4.24 No 56 0.88 Yes 19 0.64 Yes -14 0.4 No 15 33.79 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 1575808 - NM_001291345 CDK11B 1 0.63 0.15 9 2.27 0 9 3.87 No 29 1.15 Yes 0 0 No -23 0.49 No 44 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 1575829 - NM_001291345 CDK11B 1 1.09 0.22 15 4.05 0 21 4.58 No 8 1.15 Yes 20 0.9 Yes -20 0.88 Yes 50 89.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 37627134 + NM_016507 CDK12 1 21.62 22.54 72 6.65 88.71 32 5.66 Yes 54 1.02 Yes 28 0.54 Yes -31 0.52 No 39 60.85 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 37646103 + NM_016507 CDK12 1 0.07 0.13 7 7.32 90.14 25 4.52 No 45 1.62 Yes 0 0 No -57 0.55 No 46 84.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 37670333 + NM_016507 CDK12 1 0.08 0.14 10 10.23 87.44 28 6.01 Yes 15 0.55 No 0 0 No -27 0.64 No 43 73.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 37686825 + NM_016507 CDK12 1 0.75 0.32 19 5.84 75.53 17 4.9 No 48 0.7 No 22 0.71 Yes -22 0.5 No 48 69.76 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 37686883 + NM_016507 CDK12 1 62.69 26.6 72 7.97 86.99 16 6 Yes 27 1.53 Yes 26 0.45 Yes -29 0.72 Yes 44 77.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 40023669 + NM_031267 CDK13 1 0.41 0.26 14 8.69 84.89 25 6.49 Yes 12 1.24 Yes 0 0 No -24 0.71 Yes 46 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 40036288 + NM_031267 CDK13 1 0.2 0.28 15 9.33 84.62 59 7.72 Yes 10 0.8 Yes 0 0 No -28 0.95 Yes 42 96.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 40037642 + NM_031267 CDK13 1 0.5 0.67 35 8.58 82.03 32 5.57 Yes 19 0.87 Yes 0 0 No -31 0.69 Yes 46 39.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 40038944 + NM_031267 CDK13 1 0.49 0.64 32 2.84 62.86 47 5.97 Yes 18 0.01 No 25 0.17 Yes -30 0.72 Yes 40 86.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 40058071 + NM_031267 CDK13 1 1.33 0.97 44 9.82 86.93 34 6 Yes 62 -3.95 No 0 0 No -25 0.57 No 45 74.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 40092417 + NM_031267 CDK13 1 0.32 0.4 23 1.3 59.47 61 8.07 Yes 48 0.59 No 0 0 No -25 0.47 No 13 54.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 40093207 + NM_031267 CDK13 1 0.15 0.19 12 9.7 93.23 23 4.77 No 21 0.98 Yes 0 0 No -22 0.87 Yes 48 84.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 40096952 + NM_031267 CDK13 1 0.16 0.19 10 3.98 80.18 16 4.38 No 3 0.35 No 0 0 No -23 0.31 No 55 30.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 40102786 + NM_031267 CDK13 1 0.27 0.28 15 8.51 97.57 16 4.3 No 61 -4.2 No 0 0 No -26 0.4 No 45 58.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 40118372 + NM_031267 CDK13 1 0.11 0.13 9 3.05 67.11 31 4.45 No 66 1.52 Yes 0 0 No -30 0.57 No 40 73.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 40125297 + NM_031267 CDK13 1 0.48 0.46 26 8.52 92.79 28 6.54 Yes 49 -2.62 No 0 0 No -27 0.78 Yes 43 69.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 40132383 + NM_031267 CDK13 1 44.64 27.89 72 5.01 78.8 23 4.01 No 10 0.47 No 22 0.81 Yes -22 0.9 Yes 48 87.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 40132392 + NM_031267 CDK13 1 0.58 0.36 17 -0.86 0 12 4.24 No 19 0.45 No 0 0 No -31 0.88 Yes 39 84.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 90237843 + NM_001287135 CDK14 1 3.83 1.03 42 9.79 79.64 33 5.89 Yes 20 1.3 Yes 32 0.91 Yes -32 0.95 Yes 38 96.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 90251141 + NM_001287135 CDK14 1 1.98 0.51 26 9.99 93.61 31 6.4 Yes 18 0.97 Yes 0 0 No -30 0.55 No 40 64.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 90252749 + NM_001287135 CDK14 1 1.13 0.38 21 6.08 90.07 38 6.5 Yes 54 0.45 No 0 0 No -37 0.49 No 32 51.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 90321886 + NM_001287135 CDK14 1 1.63 0.53 26 9.45 92.45 24 6.7 Yes 76 0.55 No 0 0 No -23 0.81 Yes 47 81.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 90345653 + NM_001287135 CDK14 1 0.77 0.24 14 11.36 85.02 27 4.62 No 70 0.41 No 26 0.62 Yes -27 0.66 Yes 43 77.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 90364362 + NM_001287135 CDK14 1 0.18 0.15 7 7.88 80.35 31 5.29 No 12 1.44 Yes 0 0 No -24 0.79 Yes 46 76.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 90364392 + NM_001287135 CDK14 1 2.5 2.22 64 6.72 90.77 20 4.9 No 42 1.64 Yes 0 0 No -19 0.71 Yes 51 89.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 90398826 + NM_001287135 CDK14 1 0.65 0.53 29 7.08 86.51 26 4.4 No 54 1.66 Yes 0 0 No -57 0.52 No 13 64.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 90412749 + NM_001287135 CDK14 1 0.41 0.35 17 7.02 83.42 27 5.64 Yes 42 0.45 No 0 0 No -26 0.84 Yes 44 83.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 90432438 + NM_001287135 CDK14 1 1.29 1.44 44 9.91 93.23 23 5.82 Yes 10 1.5 Yes 0 0 No -22 0.88 Yes 48 91.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 90492218 + NM_001287135 CDK14 1 0.11 0.13 8 6.93 91.94 27 5.16 No 14 0.59 No 0 0 No -26 0.71 Yes 44 72.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 90537632 + NM_001287135 CDK14 1 2.06 1.38 50 10.04 93.26 25 5.57 Yes 52 0.27 No 0 0 No -24 0.69 Yes 48 50.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 90537715 + NM_001287135 CDK14 1 0.35 0.25 15 3.49 75.75 25 4.82 No 59 1.39 Yes 0 0 No -20 0.66 Yes 46 58.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 90551172 + NM_001287135 CDK14 1 0.4 0.24 15 4.84 0 17 4.58 No 10 1.14 Yes 0 0 No -22 0.84 Yes 48 88.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 90576408 + NM_001287135 CDK14 1 0.57 0.31 19 11.35 96.95 24 6.47 Yes 11 1.3 Yes 0 0 No -24 0.62 No 46 84.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 90578539 + NM_001287135 CDK14 1 1.64 1.11 43 9.56 86.3 35 7.07 Yes 60 -1.86 No 0 0 No -34 0.77 Yes 36 82.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 90748176 + NM_001287135 CDK14 1 0.24 0.11 8 8.15 82.21 53 6.41 Yes 75 1.42 Yes 0 0 No -31 0.45 No 39 73.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 90753256 + NM_001287135 CDK14 1 0.58 0.22 11 7.59 83.92 52 7.06 Yes 39 0.92 Yes 0 0 No -24 0.73 Yes 18 55.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 90753842 + NM_001287135 CDK14 1 1.28 0.53 27 10.09 83.15 42 6.34 Yes 29 0.95 Yes 0 0 No -41 0.28 No 26 47.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 90760555 + NM_001287135 CDK14 1 0.55 0.26 17 3.33 70.37 34 6.62 Yes 42 1.69 Yes 0 0 No -33 0.62 No 37 69.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 47083785 + NM_001170460 CDK16 1 0.23 0.18 12 -0.66 68.73 42 11.34 Yes 29 1.76 Yes 20 0.54 Yes -26 0.37 No 29 77.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 47085692 + NM_001170460 CDK16 1 0.11 0.19 12 8.67 88.53 18 4.9 No 32 1.57 Yes 0 0 No -44 0.6 No 53 53.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 47086558 + NM_001170460 CDK16 1 1.68 1.82 57 4.76 83.97 13 5.56 No 62 -3.26 No 27 0.51 Yes -25 0.46 No 52 36.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 47086778 + NM_001170460 CDK16 1 0.12 0.13 8 -12.98 0 42 6.72 Yes 74 -1.09 No 0 0 No -33 0.52 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 47088104 + NM_001170460 CDK16 1 0.71 1.03 43 6.02 76.18 25 5.64 Yes 55 1.52 Yes 28 0.65 Yes -53 0.46 No 46 58.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 47088133 + NM_001170460 CDK16 1 0.17 0.24 13 2.67 0 34 6.05 Yes 29 0.84 Yes 0 0 No -33 0.53 No 37 65.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 96677419 - NM_001170464 CDK17 1 0.22 0.17 11 1.33 0 35 4.69 No 22 0.4 No 22 0.75 Yes -27 0.7 Yes 43 65.98 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 96677423 - NM_001170464 CDK17 1 0.21 0.15 11 -0.83 0 31 4.48 No 18 0.41 No 22 0.75 Yes -23 0.73 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 96691129 - NM_001170464 CDK17 1 0.06 0.1 7 1.33 73.39 34 5.77 Yes 63 -5.04 No 27 0.66 Yes -22 0.54 No 42 61.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 96691132 - NM_001170464 CDK17 1 0.21 0.33 19 1.3 64.96 31 5.57 Yes 60 -4.85 No 27 0.66 Yes -25 0.43 No 45 68.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 96691437 - NM_001170464 CDK17 1 0.24 0.33 22 6.08 82.97 26 5.83 Yes 41 -4.13 No 0 0 No -25 0.58 No 45 65.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 96691499 - NM_001170464 CDK17 1 0.07 0.11 7 -11.23 0 28 6.32 Yes 15 1.17 Yes 0 0 No -27 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 96694135 - NM_001170464 CDK17 1 0.13 0.14 8 -0.44 0 36 6.76 Yes 8 0.28 No 0 0 No -27 0.67 Yes 43 83.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 96707231 - NM_001170464 CDK17 1 0.12 0.15 10 -15.16 0 38 6.54 Yes 11 0.94 Yes 0 0 No -37 0.41 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 96717623 - NM_001170464 CDK17 1 1.37 1.54 54 8.98 90.57 33 4.7 No 63 0.53 No 0 0 No -29 0.37 No 38 57.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 96717829 - NM_001170464 CDK17 1 0.29 0.4 23 7.7 82.49 27 5.57 Yes 14 0.92 Yes 0 0 No -26 0.96 Yes 44 97.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 96742295 - NM_001170464 CDK17 1 0.46 0.31 17 3.01 0 46 7.09 Yes 33 1.54 Yes 0 0 No -54 0.6 No 25 75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 96789696 - NM_001170464 CDK17 1 0.44 0.29 19 8.47 94.89 25 4.5 No 70 0.4 No 0 0 No -20 0.41 No 50 46.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 110939053 - NM_015076 CDK19 1 0.23 0.1 7 3.01 0 45 6.86 Yes 32 0.92 Yes 0 0 No -44 0.92 Yes 26 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 110944682 - NM_015076 CDK19 1 0.9 0.43 25 8.82 91.87 31 7.62 Yes 8 1.51 Yes 0 0 No -30 0.86 Yes 40 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 110948043 - NM_015076 CDK19 1 0.77 0.36 20 -6.21 0 9 3.87 No 34 0.95 Yes 0 0 No -30 0.41 No 40 70.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 110985715 - NM_015076 CDK19 1 0.65 0.26 14 4.19 70.92 34 7.21 Yes 21 0.77 Yes 0 0 No -33 0.57 No 36 78.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 111020250 - NM_015076 CDK19 1 0.32 0.15 10 4.19 0 43 7.52 Yes 73 0.5 No 0 0 No -31 0.53 No 28 52.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 111020254 - NM_015076 CDK19 1 0.23 0.11 7 2.3 84.41 39 7.26 Yes 69 0.51 No 0 0 No -27 0.54 No 32 57.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 111031858 - NM_015076 CDK19 1 0.36 0.15 10 4.41 71.62 34 5.83 Yes 60 -2.14 No 0 0 No -25 0.42 No 39 41.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 111031992 - NM_015076 CDK19 1 1.29 0.6 30 3.08 71.97 42 7.81 Yes 29 1.13 Yes 0 0 No -41 0.34 No 46 56.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 111057517 - NM_015076 CDK19 1 3.04 1.35 50 5.72 90.92 53 6.48 Yes 21 -1.45 No 0 0 No -33 0.62 No 37 81.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 111067125 - NM_015076 CDK19 1 0.56 0.19 11 5.02 90.89 27 5.33 No 41 0.62 No 0 0 No -26 0.58 No 14 62.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56362539 + NM_001798 CDK2 1 0.05 0.13 8 -8.18 0 15 4.12 No 8 0.07 No 26 0.57 Yes -15 0.7 Yes 56 32.47 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 56362658 + NM_001798 CDK2 1 0.05 0.11 8 1.93 78.74 28 4.83 No 39 0.81 Yes 0 0 No -21 0.39 No 49 65.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56363680 + NM_001798 CDK2 1 0.26 0.43 24 7.37 96.54 20 5.08 No 16 0.72 No 0 0 No -23 0.76 Yes 47 91.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 67274413 - NM_005851 CDK2AP2 1 0.03 0.1 7 1.5 75.15 15 5.42 No 33 -3.38 No 0 0 No -23 0.48 No 52 21.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67274456 - NM_005851 CDK2AP2 1 0.07 0.24 12 -1.78 0 24 5.64 Yes 36 1.03 Yes 0 0 No -36 0.39 No 47 41.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67274460 - NM_005851 CDK2AP2 1 0.12 0.39 17 3.72 62.15 20 5.32 No 32 1.04 Yes 0 0 No -32 0.49 No 51 39.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 58144342 - NM_000075 CDK4 1 0.08 0.29 18 2.54 0 22 7.48 Yes 30 0.57 No 0 0 No -30 0.54 No 34 63.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 58145443 - NM_000075 CDK4 1 0.05 0.21 12 2.65 68.22 28 6.45 Yes 72 0.3 No 27 0.82 Yes -27 0.75 Yes 43 70.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58145536 - NM_000075 CDK4 1 0.07 0.24 16 2.02 78.41 19 4.97 No 25 0.89 Yes 26 0.79 Yes -26 0.73 Yes 44 68.48 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 150751551 - NM_004935 CDK5 1 0.93 0.63 29 -5.44 0 23 5.74 Yes 51 1.9 Yes 0 0 No -15 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 150753920 - NM_004935 CDK5 1 0.55 0.33 20 2.88 77 19 6.08 Yes 6 0.45 No 19 0.85 Yes -18 0.88 Yes 52 87.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31946883 - NM_016408 CDK5RAP1 1 0.36 0.31 18 5.82 93.42 21 5.2 No 37 -2.41 No 0 0 No -20 0.87 Yes 50 94.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 31947947 - NM_016408 CDK5RAP1 1 0.7 0.64 33 4.51 71.56 42 7.95 Yes 29 2.28 Yes 0 0 No -41 0.54 No 29 93.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 31954812 - NM_016408 CDK5RAP1 1 1.39 1.08 44 1.14 78.63 39 7.48 Yes 26 2.3 Yes 35 0.77 Yes -38 0.8 Yes 32 92.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31969986 - NM_016408 CDK5RAP1 1 0.27 0.19 12 6.72 94.82 38 6.33 Yes 3 1.07 Yes 0 0 No -37 0.64 No 33 65.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 31971328 - NM_016408 CDK5RAP1 1 0.42 0.31 18 7.98 85.51 28 5.83 Yes 59 1.17 Yes 27 0.79 Yes -27 0.92 Yes 43 89.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31971379 - NM_016408 CDK5RAP1 1 0.16 0.13 9 2.65 80.61 21 7.21 Yes 8 1.16 Yes 0 0 No -20 0.77 Yes 50 84.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 31971679 - NM_016408 CDK5RAP1 1 0.45 0.22 13 -1.98 0 37 9.03 Yes 24 0.52 No 0 0 No -40 0.83 Yes 30 88.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 31972680 - NM_016408 CDK5RAP1 1 0.57 0.39 20 3.7 72.13 35 3.85 No 3 0.83 Yes 0 0 No -27 0.68 Yes 17 69.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 31972768 - NM_016408 CDK5RAP1 1 0.59 0.39 20 6.46 88.15 40 6.63 Yes 27 1.58 Yes 0 0 No -39 0.79 Yes 31 95.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 31981869 - NM_016408 CDK5RAP1 1 0.24 0.17 9 5.45 0 36 5.37 No 23 0.96 Yes 0 0 No -35 0.71 Yes 35 58.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 31983105 - NM_016408 CDK5RAP1 1 0.21 0.11 7 7.66 87.17 26 6.16 Yes 13 1.08 Yes 0 0 No -25 0.93 Yes 45 90.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 31984659 - NM_016408 CDK5RAP1 1 8.59 2.63 68 3.36 72.71 24 6.47 Yes 35 -1.2 No 0 0 No -27 0.83 Yes 43 83.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 31984743 - NM_016408 CDK5RAP1 1 1.37 0.42 26 1.56 72.51 18 4.78 No 35 -2.36 No 26 0.15 Yes -17 0.38 No 44 58.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 31987676 - NM_016408 CDK5RAP1 1 1.42 0.39 20 7.35 80.42 27 7.62 Yes 14 1.32 Yes 0 0 No -26 0.92 Yes 44 93.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123151566 - NR_073557 CDK5RAP2 1 0.25 0.19 11 5.04 0 37 6.71 Yes 24 0.35 No 0 0 No -37 0.85 Yes 33 91.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123169525 - NR_073557 CDK5RAP2 1 1.39 0.44 28 -0.57 74.31 30 6 Yes 40 2.1 Yes 0 0 No -29 0.88 Yes 41 68.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 123182180 - NR_073557 CDK5RAP2 1 0.13 0.11 7 -0.82 0 10 4 No -3 1.16 Yes 0 0 No -40 0.4 No 30 59.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123232496 - NR_073557 CDK5RAP2 1 27.48 8.85 72 -2.01 72.38 56 8.69 Yes 43 2.13 Yes 0 0 No -55 0.85 Yes 15 93.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123234141 - NR_073557 CDK5RAP2 1 1.5 1.15 48 3.25 79.51 23 4.94 No 32 -1.82 No 0 0 No -22 0.46 No 48 42.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123237560 - NR_073557 CDK5RAP2 1 0.46 0.32 18 8.01 89.04 24 5.11 No 34 1.29 Yes 0 0 No -24 0.89 Yes 46 90.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123238008 - NR_073557 CDK5RAP2 1 0.24 0.17 10 5.02 0 21 4.58 No 16 -1.2 No 0 0 No -20 0.67 Yes 50 82.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123276847 - NR_073557 CDK5RAP2 1 0.23 0.15 10 4.38 77.31 36 6.32 Yes 23 0.9 Yes 0 0 No -35 0.87 Yes 35 84.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123280165 - NR_073557 CDK5RAP2 1 2.6 1.5 49 3.34 0 27 8.23 Yes 14 1.72 Yes 26 0.88 Yes -34 0.66 Yes 36 79.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 123289724 - NR_073557 CDK5RAP2 1 0.11 0.1 7 9.46 95.2 27 4.55 No 46 0.18 No 0 0 No -26 0.86 Yes 44 70.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123299964 - NR_073557 CDK5RAP2 1 0.15 0.17 11 11.09 93.81 30 6.76 Yes 27 1.04 Yes 0 0 No -29 0.91 Yes 41 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123333270 - NR_073557 CDK5RAP2 1 0.27 0.21 12 9.23 97.88 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.77 Yes 51 92.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123333589 - NR_073557 CDK5RAP2 1 0.74 0.54 22 12.14 86.24 30 6.56 Yes 17 1.42 Yes 0 0 No -29 0.76 Yes 41 83.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46055869 + NM_001278216 CDK5RAP3 1 0.28 0.65 31 5.77 75.16 22 4.24 No 4 1.03 Yes 0 0 No -21 0.88 Yes 49 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46056200 + NM_001278216 CDK5RAP3 1 0.05 0.13 8 -0.15 0 15 3.58 No 27 1.91 Yes 33 0.87 Yes -39 0.64 No 31 93.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 46058809 + NM_001278216 CDK5RAP3 1 0.11 0.19 11 -1.41 0 10 4 No 34 1.33 Yes 0 0 No -33 0.44 No 43 48.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 92244532 - NM_001259 CDK6 1 0.19 0.81 37 7.9 83.65 15 4.25 No 2 1.69 Yes 0 0 No -27 0.81 Yes 43 78.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 92244598 - NM_001259 CDK6 1 0.24 0.94 46 -0.63 71.87 45 5.16 No 32 0.26 No 0 0 No -30 0.53 No 41 56.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 92257969 - NM_001259 CDK6 1 0.11 0.32 17 8.18 83.84 24 7.55 Yes 11 0.63 No 0 0 No -23 0.84 Yes 47 85.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 92282768 - NM_001259 CDK6 1 0.04 0.14 7 4.6 74.63 35 7.48 Yes 22 1.97 Yes 0 0 No -34 0.88 Yes 36 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 92290579 - NM_001259 CDK6 1 0.23 0.53 29 8.29 88.96 31 4.22 No 26 0.33 No 0 0 No -33 0.56 No 37 59.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 92340189 - NM_001259 CDK6 1 0.12 0.42 23 10.48 82.92 29 5.48 No 16 1.89 Yes 0 0 No -28 0.86 Yes 42 94.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 92462244 - NM_001259 CDK6 1 0.09 0.21 14 2.22 0 22 4.27 No 3 -0.82 No 0 0 No -19 0.77 Yes 51 51.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 68552205 + NM_001324069 CDK7 1 0.18 0.31 14 1.72 0 53 7.16 Yes 54 1.11 Yes 0 0 No -45 0.33 No 24 51.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 26898908 + NM_001346501 CDK8 1 0.8 0.31 16 7.15 87 26 4.02 No 7 0.21 No 0 0 No -29 0.51 No 41 51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 26967518 + NM_001346501 CDK8 1 1.57 1.19 47 2.28 80.6 19 4.86 No 74 0.16 No 0 0 No -52 0.51 No 18 68.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 26967533 + NM_001346501 CDK8 1 1.91 1.42 51 4.03 83.51 20 4.9 No 22 -3.44 No 0 0 No -19 0.32 No 53 47.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 26967572 + NM_001346501 CDK8 1 0.26 0.21 13 -2.57 64.39 32 5.74 Yes 19 1.21 Yes 0 0 No -31 0.92 Yes 39 83.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 26971275 + NM_001346501 CDK8 1 0.22 0.19 14 -0.56 0 18 4.47 No 5 0.89 Yes 18 0.77 Yes -17 0.88 Yes 53 76.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 26975605 + NM_001346501 CDK8 1 23.23 12.31 72 -3.29 52.98 29 6.09 Yes 16 1.11 Yes 25 0.87 Yes -33 0.66 No 37 80.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 130550031 + NM_001261 CDK9 1 0.09 0.21 11 8.14 79.24 31 7.25 Yes 18 1.86 Yes 0 0 No -30 0.92 Yes 40 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130550468 + NM_001261 CDK9 1 0.08 0.18 13 0.14 69.66 49 7.4 Yes NA NA NA 27 0.88 Yes -26 0.62 No 46 51.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 130550879 + NM_001261 CDK9 1 0.52 0.76 36 3.07 72.32 31 7.81 Yes 18 -0.43 No 0 0 No -30 0.93 Yes 40 89.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 20535317 + NM_017774 CDKAL1 1 4.2 3.78 66 5.08 78.14 20 8.21 Yes 7 0.92 Yes 0 0 No -19 0.75 Yes 47 59.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 20546569 + NM_017774 CDKAL1 1 2.01 1.85 57 0.73 0 21 3.7 No 27 1.06 Yes 30 0.73 Yes -28 0.56 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 20546578 + NM_017774 CDKAL1 1 1 0.92 42 -3.89 71.77 30 4.24 No 36 1.04 Yes 0 0 No -37 0.52 No 33 58.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 20550230 + NM_017774 CDKAL1 1 1.28 1.22 51 7.71 88.27 25 4.96 No 63 0.47 No 0 0 No -24 0.39 No 46 50.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 20558772 + NM_017774 CDKAL1 1 1.25 1.24 47 6.06 81.13 20 4.8 No 7 0.84 Yes 0 0 No -19 0.93 Yes 51 92.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20573977 + NM_017774 CDKAL1 1 0.35 0.32 19 7.11 85.65 33 5.82 Yes 56 0.46 No 0 0 No -32 0.69 Yes 38 78.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 20576609 + NM_017774 CDKAL1 1 0.32 0.33 17 2.85 75.91 29 6.31 Yes 51 1.35 Yes 0 0 No -28 0.75 Yes 42 73.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20577276 + NM_017774 CDKAL1 1 0.4 0.44 27 11.94 97.47 21 5.66 Yes 47 0.36 No 0 0 No -25 0.54 No 50 56.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 20596152 + NM_017774 CDKAL1 1 0.11 0.13 8 7.39 87.2 40 5.96 Yes 27 1.65 Yes 0 0 No -34 0.58 No 36 80.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 20599599 + NM_017774 CDKAL1 1 2.01 2.07 50 8.04 86.88 25 6.76 Yes 4 0.36 No 0 0 No -24 0.56 No 46 54.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 20653707 + NM_017774 CDKAL1 1 0.17 0.17 10 3.8 0 35 7.58 Yes 22 0.78 Yes 0 0 No -34 0.61 No 40 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 20673957 + NM_017774 CDKAL1 1 1.18 1.06 43 4.02 76.87 18 5.16 No 48 0.24 No 0 0 No -27 0.96 Yes 43 97.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 20674005 + NM_017774 CDKAL1 1 0.17 0.15 10 7.75 72.23 38 6.32 Yes 25 1.37 Yes 0 0 No -37 0.66 Yes 33 69.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20772037 + NM_017774 CDKAL1 1 0.37 0.28 15 8.96 81.61 50 7.07 Yes 49 0.59 No 0 0 No -49 0.57 No 21 77.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 20785228 + NM_017774 CDKAL1 1 0.33 0.36 18 9.76 83.09 41 4.98 No 28 0.21 No 0 0 No -31 0.71 Yes 39 48.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 20786911 + NM_017774 CDKAL1 1 0.12 0.13 9 6.52 85.02 18 7 Yes 5 1.23 Yes 0 0 No -28 0.51 No 53 82.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 20790206 + NM_017774 CDKAL1 1 0.57 0.6 32 7.16 86.44 34 6.73 Yes 21 1.09 Yes 0 0 No -33 0.87 Yes 37 83.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20820815 + NM_017774 CDKAL1 1 0.09 0.11 7 8 89.62 17 5.39 No 49 1.71 Yes 0 0 No -26 0.44 No 44 51.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 20859480 + NM_017774 CDKAL1 1 0.18 0.14 9 2.87 78.88 52 7.81 Yes 39 0.63 No 0 0 No -29 0.89 Yes 41 72.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 20874553 + NM_017774 CDKAL1 1 0.64 0.56 23 4.07 83.95 36 6.48 Yes 44 -1.3 No 0 0 No -39 0.7 Yes 34 82.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 20895238 + NM_017774 CDKAL1 1 0.59 0.56 26 8.43 87.09 31 4.03 No 0 0.6 No 0 0 No -24 0.68 Yes 46 69.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 20929948 + NM_017774 CDKAL1 1 0.36 0.32 16 1.12 66.19 44 7.42 Yes 31 1.4 Yes 0 0 No -43 0.65 No 27 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 20951669 + NM_017774 CDKAL1 1 0.13 0.13 7 8.85 75.9 36 5.81 Yes 37 0.47 No 0 0 No -35 0.82 Yes 35 75.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 20956511 + NM_017774 CDKAL1 1 0.19 0.14 8 10.9 86.58 26 5.17 No 13 1.54 Yes 0 0 No -25 0.8 Yes 45 82.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 21032203 + NM_017774 CDKAL1 1 0.42 0.22 13 8.02 85.44 26 5.19 No 3 1 Yes 0 0 No -25 0.77 Yes 45 75.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 21066873 + NM_017774 CDKAL1 1 0.18 0.1 7 9.5 94.24 42 6.2 Yes 42 1.24 Yes 0 0 No -41 0.69 Yes 29 75.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 21135873 + NM_017774 CDKAL1 1 0.45 0.28 17 8.1 92.9 32 4.58 No 3 0.31 No 0 0 No -26 0.82 Yes 44 74.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 21153025 + NM_017774 CDKAL1 1 2.39 1.31 44 8.72 91.24 37 7.55 Yes 24 0.91 Yes 0 0 No -36 0.65 No 38 59.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 21199321 + NM_017774 CDKAL1 1 1.91 1.15 43 10.67 92.11 39 6.12 Yes 31 0.03 No 0 0 No -27 0.56 No 46 65.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50799238 - NM_004196 CDKL1 1 1.88 0.24 13 1.56 67.85 47 6.6 Yes 34 1.28 Yes 0 0 No -46 0.64 No 24 77.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 50799411 - NM_004196 CDKL1 1 1.02 0.11 7 8.39 92.91 23 5.09 No 47 0.76 No 22 0.72 Yes -22 0.39 No 41 45.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 50802257 - NM_004196 CDKL1 1 0.92 0.24 15 6.9 83.06 12 4.11 No 36 1.34 Yes 0 0 No -26 0.86 Yes 44 94.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50808005 - NM_004196 CDKL1 1 0.94 0.15 11 5.21 80.72 23 4.6 No 3 0.78 Yes 0 0 No -22 0.94 Yes 48 93.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50819939 - NM_004196 CDKL1 1 4.32 0.61 33 8.61 80.73 31 5.86 Yes 1 1.09 Yes 0 0 No -30 0.73 Yes 40 91.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50823954 - NM_004196 CDKL1 1 0.69 0.15 8 6.95 92.53 26 5 No 16 0.7 No 0 0 No -23 0.75 Yes 50 72.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 36646941 + NM_001220778 CDKN1A 1 0.4 0.13 8 5.22 78.89 14 5.41 No NA NA NA 0 0 No -29 0.5 No 41 50.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36647088 + NM_001220778 CDKN1A 1 0.36 0.25 13 5.82 77.68 22 7.59 Yes 48 -3.62 No 0 0 No -22 0.51 No 48 65.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36647997 + NM_001220778 CDKN1A 1 0.11 0.1 7 10.54 99.45 16 5.03 No -3 -1.82 No 0 0 No -22 0.63 No 27 71.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 36648250 + NM_001220778 CDKN1A 1 7.98 5.31 51 9.93 84.3 52 8 Yes 39 1.2 Yes 22 0.41 Yes -51 0.66 Yes 19 65.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 36648332 + NM_001220778 CDKN1A 1 1.59 0.85 31 5.77 83.9 22 6.01 Yes 9 1.92 Yes 0 0 No -21 0.87 Yes 49 85.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36650416 + NM_001220778 CDKN1A 1 0.26 0.24 10 3.67 86 21 4.69 No 8 0.5 No 20 0.94 Yes -20 0.95 Yes 50 92.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 12873998 + NM_004064 CDKN1B 1 0.33 0.4 24 8.71 88.2 25 5.44 No 69 1.59 Yes 24 0.73 Yes -24 0.55 No 46 50.84 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 21989955 - NM_058195 CDKN2A 1 0.59 0.21 13 8.7 77.28 26 7.81 Yes 13 1.93 Yes 25 0.88 Yes -25 0.9 Yes 45 91.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 21992480 - NM_058195 CDKN2A 1 0.26 0.14 9 8.58 91.51 26 5.05 No 13 0.31 No 0 0 No -25 0.75 Yes 41 56.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21994053 - NM_058195 CDKN2A 1 0.48 0.22 15 3.1 76.63 13 4.26 No 0 0.37 No 32 0.26 Yes -20 0.55 No 50 59.03 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 184367243 + NM_017632 CDKN2AIP 1 0.52 0.22 11 3.39 84.38 31 6.39 Yes 64 1.04 Yes 0 0 No -30 0.77 Yes 40 81.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 133746774 - NM_080656 CDKN2AIPNL 1 0.28 0.31 17 11.36 82.19 37 7.13 Yes 24 0.84 Yes 25 0.75 Yes -36 0.65 No 34 68.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 54866616 + NM_005192 CDKN3 1 1.97 1.14 48 -1.3 0 21 4.55 No 8 0.66 No 19 0.44 Yes -25 0.69 Yes 45 66.8 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 54873113 + NM_005192 CDKN3 1 0.2 0.22 14 10.23 84.66 28 7.69 Yes 15 0.14 No 0 0 No -21 0.68 Yes 43 51.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 54873829 + NM_005192 CDKN3 1 0.16 0.24 15 8.07 89.4 24 4.89 No 46 1.56 Yes 0 0 No -23 0.53 No 47 70.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 54878204 + NM_005192 CDKN3 1 1.95 3.38 67 -4.94 68.64 87 7.04 Yes 36 1.19 Yes 0 0 No -57 0.4 No 22 67.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 54878250 + NM_005192 CDKN3 1 0.08 0.18 8 6.81 85.91 25 5.57 Yes 29 -0.76 No 0 0 No -27 0.61 No 43 71.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 54884568 + NM_005192 CDKN3 1 2.27 5.08 69 4.38 75.2 34 6.95 Yes 21 0.93 Yes 30 0.61 Yes -37 0.5 No 37 67.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 54884931 + NM_005192 CDKN3 1 2.58 4.18 70 9.45 96.55 35 5.19 No 11 0.45 No 23 0.72 Yes -23 0.48 No 47 34.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 46641128 - NM_207327 CDPF1 1 2.17 0.24 11 -5.38 0 11 3.41 No 25 0.92 Yes 0 0 No -37 0.91 Yes 33 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 46642693 - NM_207327 CDPF1 1 2.07 0.26 16 7.06 77.76 14 4.46 No 1 1.38 Yes 25 0.98 Yes -25 0.97 Yes 45 98.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 22360788 - NM_001802 CDR2 1 0.64 0.76 31 -11.23 0 12 3.87 No 25 1.86 Yes 25 0.77 Yes -37 0.78 Yes 23 46.52 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 22360791 - NM_001802 CDR2 1 0.38 0.47 20 -2.64 62.44 45 7.99 Yes 22 1.87 Yes 25 0.77 Yes -34 0.8 Yes 26 53.94 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 5108795 + NM_003818 CDS2 1 2.29 1.88 60 6.61 77.29 28 6.66 Yes 73 1.11 Yes 27 0.94 Yes -27 0.85 Yes 43 94.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 5115211 + NM_003818 CDS2 1 0.19 0.17 12 6.77 90.92 28 5.29 No 56 0.6 No 0 0 No -27 0.49 No 43 64.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5170749 + NM_003818 CDS2 1 0.24 0.47 27 -2.77 80.26 31 5.32 No 18 0.77 No 0 0 No -30 0.94 Yes 40 96.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 133302848 + NM_001282764 CDV3 1 7.82 45.08 72 5.44 86.29 66 9.38 Yes 17 0.77 Yes 27 0.75 Yes -29 0.5 No 40 54.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 133305412 + NM_001282764 CDV3 1 0.2 2.64 60 -1.36 0 16 3.87 No 36 0.37 No 26 0.66 Yes -27 0.81 Yes 38 62.13 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 133306002 + NM_001282764 CDV3 1 553.27 705.49 72 4.32 84.32 24 6.85 Yes 0 0.71 No 23 0.88 Yes -23 0.77 Yes 47 85.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 133306005 + NM_001282764 CDV3 1 72.63 93.06 72 4.61 94.16 27 7.04 Yes 3 0.69 No 23 0.88 Yes -26 0.8 Yes 44 87.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 133306739 + NM_001282764 CDV3 1 234.65 298.63 72 10.87 88.22 22 6.43 Yes 9 0.97 Yes 21 0.87 Yes -25 0.77 Yes 45 85.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 4935814 + NM_001143971 CDYL 1 10.49 7.51 71 4.27 82.42 22 4.69 No 29 -3.22 No 0 0 No -19 0.42 No 51 46.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 4945030 + NM_001143971 CDYL 1 0.37 0.22 16 7.36 86.54 37 6.08 Yes -1 0.6 No 0 0 No -19 0.44 No 45 51.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 4952755 + NM_001143971 CDYL 1 0.18 0.11 8 9.31 88.6 26 4.74 No 13 1.18 Yes 0 0 No -25 0.61 No 45 74.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 43016359 - NM_001712 CEACAM1 1 1.32 0.17 12 6.77 84.97 32 8.55 Yes 19 1.44 Yes 0 0 No -31 0.71 Yes 39 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42085705 + NM_001288773 CEACAM21 1 86.97 5.6 71 8.04 83.43 32 5.17 No 1 0.84 Yes 27 0.21 Yes -29 0.39 No 41 59.84 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 42085809 + NM_001288773 CEACAM21 1 0.96 0.11 8 5.05 79.1 21 7.75 Yes 8 0.65 No 0 0 No -20 0.8 Yes 50 83.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37433249 - NM_005760 CEBPZ 1 0.41 0.94 45 12.04 97.45 34 5.4 No 53 0.75 No 0 0 No -30 0.65 No 40 70.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 37436818 - NM_005760 CEBPZ 1 0.16 0.35 21 1.38 0 21 4.47 No 65 -3.47 No 0 0 No -18 0.71 Yes 52 58.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 37439441 - NM_005760 CEBPZ 1 0.07 0.17 10 9.63 81.9 35 8.12 Yes 22 1.56 Yes 0 0 No -32 0.58 No 38 60.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 37439534 - NM_005760 CEBPZ 1 0.12 0.25 13 -12.91 0 25 6.28 Yes 12 1 Yes 0 0 No -24 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 37443351 - NM_005760 CEBPZ 1 0.07 0.17 8 -12.36 0 42 5.62 Yes 3 0.29 No 0 0 No -29 0.6 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37448880 - NM_005760 CEBPZ 1 0.07 0.17 11 4.09 75.97 32 5.85 Yes 7 0.61 No 0 0 No -31 0.76 Yes 39 82.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37449704 - NM_005760 CEBPZ 1 0.1 0.24 13 -13.96 72.93 25 3.8 No 43 -3.49 No 0 0 No -24 0.72 Yes 46 81.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37456176 - NM_005760 CEBPZ 1 0.06 0.14 9 -5 0 24 7.44 Yes 22 1.19 Yes 0 0 No -34 0.67 Yes 36 68.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 37424396 + NM_001322375 CEBPZOS 1 0.36 0.35 21 7.19 76.07 27 4.35 No 8 0.96 Yes 20 0.78 Yes -26 0.49 No 44 56.57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 37425636 + NM_001322375 CEBPZOS 1 2.87 3 68 5.75 78.01 18 5.25 No 2 0.45 No 22 0.63 Yes -34 0.4 No 36 51.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 17663631 - NM_177405 CECR1 1 0.17 0.19 10 1.32 69.78 10 4.69 No 11 -0.38 No 0 0 No -23 0.59 No 55 45.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 17666825 - NM_177405 CECR1 1 0.24 0.22 12 4.56 74.2 26 4.6 No 67 1.47 Yes 0 0 No -25 0.73 Yes 45 63.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 17622054 - NM_033070 CECR5 1 0.19 0.17 10 3.21 79.58 21 5.64 Yes 8 0.66 No 0 0 No -20 0.73 Yes 50 78.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 17622109 - NM_033070 CECR5 1 3.01 2.11 59 3.84 78.35 19 4.85 No 26 1.99 Yes 0 0 No -38 0.9 Yes 32 58.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 17622364 - NM_033070 CECR5 1 0.14 0.11 7 3.08 75.42 39 6.65 Yes 3 1.7 Yes 0 0 No -38 0.63 No 36 75.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 17623099 - NM_033070 CECR5 1 1.47 1.01 49 9.33 86.52 25 5.22 No 55 -2.63 No 0 0 No -34 0.36 No 36 39.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 17624645 - NM_033070 CECR5 1 0.22 0.18 12 8.84 86.15 19 3.5 No 34 0.83 Yes 0 0 No -23 0.68 Yes 47 64.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 17626060 - NM_033070 CECR5 1 3.11 1.96 60 3.9 82.37 48 6.91 Yes 32 -1.1 No 0 0 No -22 0.79 Yes 48 83.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 17626277 - NM_033070 CECR5 1 0.22 0.14 9 10.43 83.44 20 5.83 Yes 7 0.51 No 0 0 No -19 0.94 Yes 51 93.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 17629419 - NM_033070 CECR5 1 1.08 0.74 32 7.44 83.3 15 4.95 No 68 1.17 Yes 0 0 No -24 0.73 Yes 46 56.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 17629494 - NM_033070 CECR5 1 0.31 0.17 9 8.42 84.64 38 5.93 Yes 51 1.21 Yes 28 0.4 Yes -28 0.35 No 33 44.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 17629535 - NM_033070 CECR5 1 0.93 0.63 31 10.86 87.34 23 5.39 No 10 1.22 Yes 0 0 No -22 0.9 Yes 48 91.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47493930 - NM_001172639 CELF1 1 0.33 0.89 39 8.96 79.81 35 6.29 Yes 22 0.51 No 26 0.95 Yes -34 0.79 Yes 36 60.8 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 47494778 - NM_001172639 CELF1 1 0.4 0.9 40 -5.18 0 10 3.87 No 24 1.68 Yes 0 0 No -36 0.72 Yes 34 76.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47498512 - NM_001172639 CELF1 1 82.41 102.46 72 4.98 79.58 35 4.98 No 56 1.43 Yes 26 0.77 Yes -19 0.66 No 51 58.89 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 47498512 - NM_001172639 CELF1 1 0.12 0.15 11 4.98 79.58 35 4.98 No 56 1.43 Yes 26 0.77 Yes -19 0.66 No 51 58.89 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 47500493 - NM_001172639 CELF1 1 19.58 42.03 72 5.52 0 21 4.58 No 38 2 Yes 32 0.87 Yes -50 0.46 No 20 47.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 47514889 - NM_001172639 CELF1 1 1.04 0.89 39 7.01 82.63 24 5.92 Yes 11 1.36 Yes 0 0 No -23 0.82 Yes 47 93.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47515996 - NM_001172639 CELF1 1 0.72 0.57 26 6.3 80.74 65 8.31 Yes 52 1.23 Yes 23 0.47 Yes -28 0.49 No 42 67.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 47517605 - NM_001172639 CELF1 1 1.78 1.47 48 7.94 85.14 18 5.72 Yes 5 1.64 Yes 0 0 No -17 0.67 Yes 47 63.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 47519792 - NM_001172639 CELF1 1 0.64 0.56 28 6.38 77.36 20 6.99 Yes 7 1.05 Yes 0 0 No -19 0.67 Yes 51 91.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11245263 + NM_001326317 CELF2 1 0.16 0.4 22 2.19 83.16 34 5.63 Yes 21 0.39 No 0 0 No -28 0.79 Yes 42 71.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 11252633 + NM_001326317 CELF2 1 0.44 1.13 48 5.83 92.38 14 4.02 No 15 0.11 No 0 0 No -25 0.63 No 43 85.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 11260036 + NM_001326317 CELF2 1 0.4 1.28 56 9.86 86.24 29 6.32 Yes 16 0.51 No 0 0 No -28 0.94 Yes 42 96.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 11268913 + NM_001326317 CELF2 1 0.06 0.17 8 8.93 84.84 33 5.93 Yes 31 0.23 No 0 0 No -32 0.59 No 38 67.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 11270350 + NM_001326317 CELF2 1 0.26 0.82 39 7.09 74.96 36 6.61 Yes 10 1.26 Yes 0 0 No -36 0.61 No 35 77.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 11285457 + NM_001326317 CELF2 1 0.23 0.72 36 9.19 81.31 26 6.46 Yes 13 1.17 Yes 0 0 No -25 0.81 Yes 45 81.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11295974 + NM_001326317 CELF2 1 0.07 0.15 8 9.33 85.27 13 6.17 Yes 0 1.6 Yes 0 0 No -22 0.87 Yes 48 76.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11300694 + NM_001326317 CELF2 1 0.27 0.49 25 8.74 86.67 37 6.24 Yes 67 1.71 Yes 0 0 No -23 0.36 No 31 36.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 11302151 + NM_001326317 CELF2 1 1.01 1.96 53 12.18 95.3 28 6.29 Yes 15 1.29 Yes 0 0 No -27 0.6 No 48 59.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 11309926 + NM_001326317 CELF2 1 0.13 0.33 18 11.97 91.82 36 7.31 Yes 23 1.5 Yes 0 0 No -26 0.74 Yes 44 77.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11311321 + NM_001326317 CELF2 1 0.18 0.43 24 9.08 94.37 19 5.2 No 28 1.43 Yes 0 0 No -32 0.71 Yes 38 87.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11313380 + NM_001326317 CELF2 1 0.08 0.17 10 2.37 73.21 40 7.71 Yes 27 1.69 Yes 0 0 No -39 0.74 Yes 31 96.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11317264 + NM_001326317 CELF2 1 1.04 1.56 57 10.95 85.94 23 5.29 No 10 1.06 Yes 0 0 No -22 0.76 Yes 48 80.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11368989 + NM_001326317 CELF2 1 0.06 0.18 10 5.99 80.52 32 5.53 No 27 0.97 Yes 0 0 No -25 0.37 No 39 60.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 11372418 + NM_001326317 CELF2 1 0.24 0.64 27 10.93 85.14 31 6.96 Yes 18 1.72 Yes 30 0.87 Yes -30 0.77 Yes 40 75.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 68357970 - NM_001812 CENPC 1 6.13 3.54 66 2.65 63.46 19 5.55 No 6 0.31 No 0 0 No -18 0.55 No 52 71.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 68358540 - NM_001812 CENPC 1 0.76 0.46 23 5.02 83.94 25 5 No 12 0.59 No 0 0 No -24 0.86 Yes 46 90.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 68359420 - NM_001812 CENPC 1 0.5 0.14 9 6.97 81.59 19 4.69 No 6 1.51 Yes 0 0 No -32 0.46 No 52 63.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 68359676 - NM_001812 CENPC 1 0.19 0.17 11 4.29 78.98 36 6.32 Yes 33 1.68 Yes 0 0 No -33 0.29 No 37 47.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 68376547 - NM_001812 CENPC 1 0.31 0.17 12 3.62 71.39 14 5.48 No 56 0 No 0 0 No -23 0.62 No 47 65.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 68376589 - NM_001812 CENPC 1 0.63 0.32 17 1.82 71.67 27 5.39 No 47 0.32 No 0 0 No -26 0.79 Yes 44 60.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 68380394 - NM_001812 CENPC 1 0.27 0.15 9 2.28 0 15 4.58 No 12 0.68 No 0 0 No -58 0.42 No 43 51.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 68385216 - NM_001812 CENPC 1 0.19 0.13 9 3.95 0 35 8.55 Yes 46 0.86 Yes 0 0 No -34 0.8 Yes 36 87.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68403695 - NM_001812 CENPC 1 0.65 0.54 30 3.25 0 35 7.6 Yes 22 1.45 Yes 0 0 No -34 0.56 No 36 81.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 104059607 - NM_001286734 CENPE 1 182.93 39.89 72 6.4 83.56 37 6.15 Yes 24 0.48 No 33 0.58 Yes -36 0.59 No 34 77.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 104061237 - NM_001286734 CENPE 1 17.15 3.93 64 4.1 68.12 24 6.41 Yes 11 1.73 Yes 23 0.93 Yes -31 0.63 No 39 87.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 104070560 - NM_001286734 CENPE 1 0.16 0.18 9 -8.67 0 10 3.27 No 60 0.67 No 0 0 No -30 0.69 Yes 40 60.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 104070564 - NM_001286734 CENPE 1 0.12 0.17 10 -9.66 65.48 27 5.89 Yes 56 0.67 No 0 0 No -26 0.74 Yes 44 66.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 104082385 - NM_001286734 CENPE 1 0.12 0.17 10 -4.74 56.93 30 5.35 No 56 0.33 No 0 0 No -29 0.74 Yes 23 25.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 104082405 - NM_001286734 CENPE 1 0.58 0.54 28 -3.42 0 46 6.1 Yes 59 0.68 No 0 0 No -45 0.68 Yes 25 70.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 104084711 - NM_001286734 CENPE 1 180.42 55.51 72 10.81 82.84 99 10.04 Yes 29 0.76 No 22 0.7 Yes -41 0.75 Yes 29 85.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 104089927 - NM_001286734 CENPE 1 2.21 0.68 34 8.87 86.26 22 5.92 Yes 33 0.23 No 0 0 No -21 0.63 No 49 71.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 104106459 - NM_001286734 CENPE 1 0.56 0.26 14 8.76 88.12 37 6.06 Yes 24 0.95 Yes 0 0 No -32 0.57 No 38 49.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 214798277 + NM_016343 CENPF 1 0.28 0.24 13 9.75 89.84 38 6.44 Yes 25 1.22 Yes 0 0 No -38 0.67 Yes 32 78.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 214826827 + NM_016343 CENPF 1 0.72 0.88 40 11.4 92.63 25 5.39 No 23 0.23 No 24 0.8 Yes -24 0.8 Yes 46 84.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 68490774 + NM_022909 CENPH 1 0.52 0.79 34 10.5 79.24 40 8.18 Yes 27 2.06 Yes 0 0 No -39 0.83 Yes 31 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 100353700 + NM_001318521 CENPI 1 1.85 0.36 20 8.04 78.75 112 10.83 Yes 37 0.59 No 26 0.62 Yes -25 0.55 No 45 57.6 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 100354797 + NM_001318521 CENPI 1 38.66 7.08 70 10.86 88.27 34 9.59 Yes 31 0.97 Yes 33 0.83 Yes -33 0.77 Yes 27 57.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 100360950 + NM_001318521 CENPI 1 0.44 0.22 11 8.45 79.89 26 7.19 Yes 13 1.14 Yes 0 0 No -25 0.71 Yes 45 74.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 100377173 + NM_001318521 CENPI 1 2.36 0.97 40 9.05 87.15 24 6.51 Yes 11 2.14 Yes 0 0 No -23 0.84 Yes 47 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 100377207 + NM_001318521 CENPI 1 0.23 0.13 7 8.6 88.14 39 6.56 Yes 45 2.13 Yes 0 0 No -38 0.66 No 32 92.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 100391920 + NM_001318521 CENPI 1 1.77 0.43 20 11.58 84.13 31 7.07 Yes 18 0.97 Yes 0 0 No -26 0.43 No 44 51.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 100395659 + NM_001318521 CENPI 1 0.41 0.11 8 4.09 0 42 7.73 Yes 33 0.56 No 0 0 No -36 0.92 Yes 34 94.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 100396373 + NM_001318521 CENPI 1 3.53 0.81 33 3.88 84 15 4.59 No 66 1.28 Yes 0 0 No -24 0.71 Yes 46 58.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 100400808 + NM_001318521 CENPI 1 0.7 0.26 15 12 89.11 26 5.39 No 72 1.58 Yes 0 0 No -25 0.94 Yes 45 94.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 25458207 - NR_047594 CENPJ 1 0.33 0.18 10 -0.84 64.69 21 4.86 No 19 0.83 Yes 0 0 No -20 0.69 Yes 33 73.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 25458932 - NR_047594 CENPJ 1 1.88 0.79 35 4.37 75.35 29 8.2 Yes 16 0.87 Yes 0 0 No -28 0.82 Yes 42 91.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 25465634 - NR_047594 CENPJ 1 0.52 0.21 12 7.24 78.49 26 5.66 Yes 75 0.59 No 0 0 No -25 0.93 Yes 45 88.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25466994 - NR_047594 CENPJ 1 0.41 0.17 11 -3.28 0 17 4.58 No 34 1.42 Yes 0 0 No -46 0.64 No 24 88.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 25467008 - NR_047594 CENPJ 1 2.6 1.22 46 -3.04 84.41 33 6.37 Yes 20 1.45 Yes 34 0.7 Yes -32 0.67 Yes 38 86.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 25471603 - NR_047594 CENPJ 1 0.55 0.26 15 6.18 83.53 36 5.78 Yes 16 1.12 Yes 0 0 No -28 0.82 Yes 42 89.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 25471677 - NR_047594 CENPJ 1 5.67 2.56 63 4.59 79.54 42 4.9 No 29 1.15 Yes 0 0 No -41 0.56 No 29 76.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 25473718 - NR_047594 CENPJ 1 0.15 0.11 7 -6.9 0 26 4.74 No 13 0.22 No 0 0 No -25 0.75 Yes 45 71.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25485681 - NR_047594 CENPJ 1 0.15 0.1 7 6.54 67.62 23 5.39 No 10 0.28 No 0 0 No -22 0.84 Yes 48 54.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 64814277 - NM_022145 CENPK 1 0.18 0.26 16 7.27 88.76 27 5.56 Yes 14 0.46 No 0 0 No -27 0.48 No 43 69.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 64814380 - NM_022145 CENPK 1 0.79 1 39 -2.62 67.43 27 5.93 Yes 14 0.87 Yes 0 0 No -26 0.79 Yes 44 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 64814408 - NM_022145 CENPK 1 0.39 0.5 24 2.46 59.52 48 4.51 No 55 0.65 No 0 0 No -31 0.45 No 48 49.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 64815414 - NM_022145 CENPK 1 0.26 0.32 17 3.54 63.35 48 7.41 Yes 23 0.32 No 0 0 No -47 0.41 No 23 52.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 64820505 - NM_022145 CENPK 1 1.08 1.19 44 3.92 84.41 23 5.94 Yes 10 1.08 Yes 22 0.88 Yes -22 0.97 Yes 48 97.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 64823237 - NM_022145 CENPK 1 0.35 0.42 24 10.4 83.2 22 5.15 No 0 0.57 No 0 0 No -27 0.8 Yes 43 76.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 64824877 - NM_022145 CENPK 1 0.5 0.68 29 1.73 0 14 4.18 No 8 0.34 No 20 0.66 Yes -20 0.62 No 50 59.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 64833677 - NM_022145 CENPK 1 0.11 0.11 8 7.87 98.05 22 5.09 No 9 0.27 No 0 0 No -21 0.93 Yes 49 91.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 64834932 - NM_022145 CENPK 1 0.34 0.36 20 4.82 78.09 18 7.11 Yes 5 0.86 Yes 0 0 No -28 0.62 No 42 81.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 64837264 - NM_022145 CENPK 1 0.29 0.31 19 5.04 83 24 5.18 No 11 1.07 Yes 23 0.97 Yes -23 0.94 Yes 47 95.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 64838455 - NM_022145 CENPK 1 0.13 0.13 8 -12.85 62.5 31 7.63 Yes 64 0.76 No 0 0 No -36 0.49 No 34 58.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 64844990 - NM_022145 CENPK 1 0.4 0.49 26 8.59 84.71 28 6.63 Yes 15 0.42 No 0 0 No -27 0.63 No 43 50.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 64847070 - NM_022145 CENPK 1 4.27 5.36 69 4.19 0 40 7.48 Yes 27 1.23 Yes 39 0.55 Yes -38 0.38 No 32 72.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 64847074 - NM_022145 CENPK 1 0.26 0.33 17 2.3 84.41 36 7.21 Yes 23 1.24 Yes 39 0.55 Yes -34 0.39 No 36 71.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 64850726 - NM_022145 CENPK 1 6.15 4.07 67 0.54 71.33 25 5.2 No 61 0.96 Yes 24 0.9 Yes -24 0.96 Yes 46 95.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 64850761 - NM_022145 CENPK 1 0.25 0.15 11 4.13 86.53 16 4.69 No 26 1 Yes 24 0.9 Yes -33 0.26 No 32 46.76 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 64853205 - NM_022145 CENPK 1 0.57 0.43 17 2.77 80.87 37 3.84 No 8 0.05 No 0 0 No -26 0.65 No 44 73.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 173772327 - NM_033319 CENPL 1 0.34 0.17 10 6.67 78.91 26 10.33 Yes 13 1.04 Yes 0 0 No -25 0.49 No 41 64.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 173775695 - NM_033319 CENPL 1 0.23 0.1 7 4.91 90.11 27 5.3 No 2 0.74 No 0 0 No -26 0.59 No 44 51.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 173775715 - NM_033319 CENPL 1 13.98 5.92 70 2.92 0 44 5.5 No 57 -1.52 No 30 0.64 Yes -30 0.43 No 45 52.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 173775719 - NM_033319 CENPL 1 1.22 0.54 25 0.31 83 40 5.31 No 53 -1.52 No 30 0.64 Yes -26 0.57 No 44 46.14 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 173776449 - NM_033319 CENPL 1 3.57 2.13 62 8.52 85.05 20 5 No 7 0.55 No 25 0.55 Yes -25 0.68 Yes 45 61.24 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 173776653 - NM_033319 CENPL 1 0.2 0.14 9 -1.38 0 42 6.27 Yes 29 1.17 Yes 0 0 No -35 0.61 No 35 72.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 173793148 - NM_033319 CENPL 1 0.76 0.1 7 -1.94 0 13 4.36 No 35 0.25 No 0 0 No -47 0.78 Yes 30 86.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 42341394 - NM_001304371 CENPM 1 1.14 2.65 64 9.91 84.05 28 6.16 Yes 15 0.99 Yes 27 0.91 Yes -27 0.93 Yes 43 93.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 42341926 - NM_001304371 CENPM 1 0.18 0.4 21 4.5 82.61 32 6.37 Yes 14 0.98 Yes 0 0 No -31 0.71 Yes 39 79.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42341977 - NM_001304371 CENPM 1 0.51 1.13 48 9.5 86.72 24 5.39 No 46 0.03 No 0 0 No -24 0.62 No 46 71.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 42342215 - NM_001304371 CENPM 1 0.43 1.01 41 1.78 84.31 22 4.8 No 9 0.7 No 0 0 No -21 0.79 Yes 49 69.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 81047864 + NM_001100625 CENPN 1 0.19 0.36 19 3.1 0 37 6.09 Yes 53 0.7 No 0 0 No -31 0.42 No 34 57.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81047864 + NM_001100625 CENPN 1 0.18 0.32 18 3.1 0 37 6.09 Yes 53 0.7 No 0 0 No -31 0.42 No 34 57.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81047884 + NM_001100625 CENPN 1 0.12 0.17 10 4.49 87.07 27 5.39 No 73 0.71 No 0 0 No -26 0.59 No 48 45.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81050974 + NM_001100625 CENPN 1 0.06 0.1 7 -2.22 0 12 4.06 No 53 0.55 No 0 0 No -46 0.49 No 44 35.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81052517 + NM_001100625 CENPN 1 0.09 0.14 9 6.75 84.36 22 4.32 No 9 1.09 Yes 0 0 No -21 0.91 Yes 49 86.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81055545 + NM_001100625 CENPN 1 0.32 0.33 19 8.23 85.02 21 6.97 Yes 8 1.91 Yes 0 0 No -20 0.88 Yes 50 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81056359 + NM_001100625 CENPN 1 52.58 47.13 72 8.36 90.66 26 5.18 No 29 1.54 Yes 32 0.67 Yes -31 0.6 No 39 52.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 81056943 + NM_001100625 CENPN 1 0.24 0.19 12 6.35 83.89 32 6.68 Yes 55 1.27 Yes 0 0 No -29 0.69 Yes 41 75.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81058696 + NM_001100625 CENPN 1 0.22 0.18 7 5.49 84.92 37 6.47 Yes 24 0.72 No 0 0 No -28 0.83 Yes 34 57.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 25018618 + NM_024322 CENPO 1 0.33 0.1 7 11.23 84.12 29 7.18 Yes 16 1.05 Yes 0 0 No -28 0.55 No 42 62.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 25038466 + NM_024322 CENPO 1 8.52 5.63 69 4.87 82.89 45 7.08 Yes 72 1.02 Yes 23 0.59 Yes -23 0.52 No 36 61.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 25039599 + NM_024322 CENPO 1 4.42 2.54 61 2.05 70.96 34 7.48 Yes 21 1.29 Yes 33 0.74 Yes -34 0.48 No 37 59.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 25039627 + NM_024322 CENPO 1 4 2.35 60 8.95 73.92 23 5.39 No 49 1.31 Yes 22 0.85 Yes -22 0.69 Yes 48 74.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 95109693 + NM_001286969 CENPP 1 4.18 1.88 55 3.95 66.51 28 5.36 No 15 0.55 No 0 0 No -27 0.55 No 43 69.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95112197 + NM_001286969 CENPP 1 0.43 0.19 12 8.33 90.66 24 4.19 No 5 0.38 No 0 0 No -23 0.86 Yes 47 68.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 95127717 + NM_001286969 CENPP 1 0.2 0.1 7 3.01 0 37 9.63 Yes 24 1.33 Yes 0 0 No -37 0.81 Yes 33 81.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95142049 + NM_001286969 CENPP 1 0.57 0.25 15 -2.92 0 31 5.64 Yes 28 0.52 No 0 0 No -30 0.95 Yes 40 93.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 49431489 + NM_018132 CENPQ 1 1.34 0.42 20 8.72 94.56 20 5.1 No 67 1.04 Yes 0 0 No -24 0.61 No 46 79.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 49437852 + NM_018132 CENPQ 1 14.46 5.01 68 10.5 92.27 32 5.85 Yes 43 -1.88 No 23 0.83 Yes -31 0.94 Yes 39 93.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 49441204 + NM_018132 CENPQ 1 0.37 0.33 18 4.78 88.36 21 5 No 8 0.68 No 0 0 No -20 0.73 Yes 50 90.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 49445805 + NM_018132 CENPQ 1 0.26 0.25 17 8.62 89.68 31 6.63 Yes 18 1.99 Yes 0 0 No -30 0.88 Yes 40 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 49456303 + NM_018132 CENPQ 1 0.31 0.29 19 5.18 60.75 23 5.32 No 63 -4.03 No 24 0.64 Yes -22 0.77 Yes 48 85.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67862463 - NM_025082 CENPT 1 1.47 0.54 27 0.13 74.32 24 4.77 No 36 0.83 Yes 23 0.92 Yes -23 0.81 Yes 47 84.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67862509 - NM_025082 CENPT 1 0.43 0.14 10 -4.6 0 15 3.78 No 65 -5.16 No 30 0.13 Yes -14 0.64 No 53 72.03 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 67862624 - NM_025082 CENPT 1 0.78 0.29 19 3.04 64.71 24 5.47 No 11 0.38 No 0 0 No -23 0.78 Yes 47 58.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 67863962 - NM_025082 CENPT 1 0.5 0.17 11 0.43 0 13 3.77 No 75 0.18 No 0 0 No -17 0.65 No 53 49.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67864215 - NM_025082 CENPT 1 0.51 0.17 10 1.79 78.97 23 4.9 No 13 0.3 No 0 0 No -25 0.83 Yes 45 86.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67864596 - NM_025082 CENPT 1 0.32 0.14 8 8.39 87.13 23 5.39 No 47 -1.91 No 22 0.72 Yes -22 0.78 Yes 48 78.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67864792 - NM_025082 CENPT 1 2.58 1.18 48 0.04 0 21 4.47 No 8 0.4 No 0 0 No -20 0.89 Yes 50 80.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67864835 - NM_025082 CENPT 1 0.52 0.18 9 -6.42 0 10 4 No 61 -4.88 No 0 0 No -51 0.45 No 52 27.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67865228 - NM_025082 CENPT 1 0.23 0.17 10 4.36 79.13 22 5.9 Yes 52 1.74 Yes 0 0 No -27 0.63 No 49 57.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67866040 - NM_025082 CENPT 1 0.35 0.26 16 2.27 80.15 25 4.1 No 76 -1.8 No 24 0.83 Yes -20 0.74 Yes 50 89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67866254 - NM_025082 CENPT 1 0.92 0.4 23 -4.01 0 18 4.74 No 5 -1.42 No 19 0.56 Yes -23 0.42 No 42 23.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67866258 - NM_025082 CENPT 1 3 1.29 49 -5.97 0 14 4.32 No 1 -1.16 No 19 0.56 Yes -19 0.41 No 57 26.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 185624228 - NR_104593 CENPU 1 0.26 0.44 22 10.17 92.73 53 7.62 Yes 40 0.85 Yes 0 0 No -26 0.73 Yes 44 84.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185627102 - NR_104593 CENPU 1 0.06 0.1 7 6.81 78 31 6.73 Yes 39 1.56 Yes 0 0 No -30 0.86 Yes 40 87.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185631302 - NR_104593 CENPU 1 0.13 0.21 12 3.82 82.03 25 6.39 Yes 40 1.25 Yes 0 0 No -24 0.75 Yes 46 88.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185637784 - NR_104593 CENPU 1 0.12 0.24 12 2.51 0 32 6.16 Yes 40 0.23 No 0 0 No -34 0.86 Yes 36 90.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 185650186 - NR_104593 CENPU 1 0.15 0.13 9 -1.85 0 27 6.61 Yes 14 1.26 Yes 0 0 No -30 0.48 No 40 57.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 16251994 - NM_181716 CENPV 1 0.23 0.15 10 2.99 0 13 3.87 No 25 0.7 No 0 0 No -37 0.89 Yes 33 95.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 16252648 - NM_181716 CENPV 1 32.91 20.85 72 11.01 87.57 19 5 No 23 0.78 Yes 22 0.8 Yes -27 0.72 Yes 48 59.22 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 16252664 - NM_181716 CENPV 1 0.5 0.35 22 -4.81 0 12 3.2 No 7 0.77 No 22 0.8 Yes -11 0.54 No 51 57.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 16252671 - NM_181716 CENPV 1 0.6 0.39 22 4.18 79.62 13 4.9 No 0 0.75 No 22 0.8 Yes -21 0.57 No 49 68.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79977081 - NM_001330536 CENPX 1 1.3 1.04 37 4.52 80.05 20 4.9 No 23 1.35 Yes 0 0 No -35 0.85 Yes 35 82.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 3743368 - NM_014704 CEP104 1 0.24 0.13 7 5.44 85.93 22 6 Yes 66 0.26 No 0 0 No -21 0.68 Yes 49 80.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 3745536 - NM_014704 CEP104 1 0.75 0.43 25 7.95 82.41 21 5 No 63 -4.03 No 0 0 No -20 0.44 No 52 54.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 3753910 - NM_014704 CEP104 1 5.28 3.85 67 5.99 87.28 16 6.46 Yes 3 1.8 Yes 28 0.7 Yes -28 0.89 Yes 42 89.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 3757734 - NM_014704 CEP104 1 0.2 0.13 9 4.62 78.05 39 5.92 Yes 41 0.55 No 0 0 No -23 0.8 Yes 47 85.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 3758632 - NM_014704 CEP104 1 2.8 2.08 58 -5.31 0 16 4.12 No 3 1.04 Yes 0 0 No -15 0.52 No 55 61.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 3764196 - NM_014704 CEP104 1 2.03 1.33 48 6.24 80.84 26 5.3 No 71 -2.79 No 20 0.6 Yes -25 0.85 Yes 45 79.91 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 3764650 - NM_014704 CEP104 1 0.48 0.31 17 7.55 87.4 29 4.75 No 67 1.17 Yes 0 0 No -38 0.47 No 51 56.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 3772566 - NM_014704 CEP104 1 0.63 0.15 11 5.41 83.3 32 4.32 No 31 1.03 Yes 0 0 No -27 0.8 Yes 43 88.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 122682504 - NM_153223 CEP120 1 0.28 0.22 10 6.47 77.87 22 6.92 Yes 28 1.08 Yes 0 0 No -28 0.95 Yes 42 96.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 122696122 - NM_153223 CEP120 1 0.41 0.22 14 5.92 82 58 7.22 Yes 45 1.18 Yes 0 0 No -29 0.62 No 41 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 122713246 - NM_153223 CEP120 1 1.14 0.68 33 2.7 72.32 17 5.47 No 4 0.74 No 20 0.88 Yes -27 0.74 Yes 43 38.32 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 122725700 - NM_153223 CEP120 1 6.74 3.57 69 5.46 71.78 35 5.69 Yes 22 0.16 No 0 0 No -30 0.53 No 40 80.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 122725726 - NM_153223 CEP120 1 0.23 0.14 7 1.33 63.46 23 5.61 Yes 35 -3.91 No 0 0 No -22 0.95 Yes 48 90.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 122725760 - NM_153223 CEP120 1 0.48 0.24 14 0.93 71.88 13 5.09 No 0 0.32 No 0 0 No -28 0.54 No 42 46.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 122725817 - NM_153223 CEP120 1 0.59 0.33 19 0.18 67.55 21 5.19 No 8 -2.3 No 0 0 No -37 0.26 No 33 79.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 122725993 - NM_153223 CEP120 1 0.46 0.25 17 9.78 83.12 23 5.92 Yes 10 0.92 Yes 0 0 No -37 0.55 No 33 69.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 122738709 - NM_153223 CEP120 1 2.14 1.06 42 6.48 89.69 24 3.77 No 60 1.11 Yes 0 0 No -26 0.9 Yes 44 94.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 122739039 - NM_153223 CEP120 1 0.23 0.13 8 4.28 78 65 8.03 Yes 19 0.65 No 18 0.66 Yes -18 0.78 Yes 52 91.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 122739459 - NM_153223 CEP120 1 1.16 0.56 28 6.98 79.84 23 4.88 No 72 0.88 Yes 26 0.52 Yes -25 0.62 No 45 71.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 122758270 - NM_153223 CEP120 1 1.31 0.53 26 0.88 79.39 22 5.1 No 76 -6.63 No 21 0.87 Yes -22 0.48 No 48 28.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 80993606 - NM_152446 CEP128 1 0.74 0.1 7 8.23 86.62 25 5.29 No 12 1.34 Yes 24 0.94 Yes -24 0.92 Yes 46 95.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 81156733 - NM_152446 CEP128 1 1.05 0.11 7 6.7 86.01 28 5.29 No 60 -1.97 No 0 0 No -27 0.39 No 17 72.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 81221453 - NM_152446 CEP128 1 1.28 0.28 18 8.98 87.65 28 6.28 Yes 15 0.43 No 0 0 No -27 0.9 Yes 43 85.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 81302878 - NM_152446 CEP128 1 1.01 0.26 12 6.2 85.28 22 5.66 Yes 9 0.56 No 0 0 No -21 0.63 No 49 68.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 81345308 - NM_152446 CEP128 1 0.57 0.15 9 11.8 82.42 30 6 Yes 70 -2.47 No 0 0 No -29 0.9 Yes 41 90.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 81362130 - NM_152446 CEP128 1 0.49 0.1 7 3.84 0 46 8.29 Yes 54 0.74 No 0 0 No -32 0.39 No 39 42.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 81373838 - NM_152446 CEP128 1 3.26 0.49 26 8.17 91.99 17 6.37 Yes 4 1.18 Yes 0 0 No -27 0.82 Yes 43 83.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 81373995 - NM_152446 CEP128 1 2.61 0.47 22 8.59 88.56 39 5.82 Yes 20 1.25 Yes 0 0 No -32 0.72 Yes 38 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79165133 - NM_001319228 CEP131 1 5.5 0.81 40 -10.08 75.62 25 5.2 No 56 0.61 No 21 0.63 Yes -20 0.77 Yes 50 53.87 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 79165151 - NM_001319228 CEP131 1 11.5 1.72 54 -2.82 0 51 7.55 Yes 38 0.62 No 25 0.05 Yes -50 0.72 Yes 20 41.71 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 79172083 - NM_001319228 CEP131 1 1.59 0.24 16 2.64 85.56 19 4.9 No 48 0.1 No 0 0 No -39 0.93 Yes 31 95.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79172751 - NM_001319228 CEP131 1 0.87 0.14 7 8.23 88.04 30 5.43 No NA NA NA 0 0 No -23 0.56 No 47 61.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79173630 - NM_001319228 CEP131 1 0.65 0.11 7 -6.66 0 16 3.87 No 24 -0.12 No 0 0 No -28 0.39 No 34 51.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 56819258 + NM_025009 CEP135 1 1.02 0.31 17 -0.23 0 11 4.12 No 36 0.31 No 0 0 No -27 0.63 No 43 69.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 56825837 + NM_025009 CEP135 1 0.49 0.17 9 2.54 68.15 29 5.47 No 52 0.86 Yes 18 0.47 Yes -28 0.59 No 41 65.33 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 56830422 + NM_025009 CEP135 1 0.53 0.22 15 0.86 75.49 26 5.1 No 43 0.2 No 21 0.76 Yes -25 0.62 No 45 44.85 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 56835232 + NM_025009 CEP135 1 3.4 1.03 42 -3.1 0 24 5.29 No 11 0.8 Yes 0 0 No -23 0.74 Yes 47 91.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 56835261 + NM_025009 CEP135 1 2.92 0.78 37 3.16 82.85 24 4.88 No 40 0.78 Yes 0 0 No -23 0.86 Yes 47 65.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 56865685 + NM_025009 CEP135 1 0.29 0.13 8 3.53 0 22 4.56 No 55 1.47 Yes 0 0 No -21 0.49 No 17 87.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 56875878 + NM_025009 CEP135 1 0.24 0.11 8 5.15 81.96 18 4.66 No 35 0.12 No 27 0.8 Yes -25 0.39 No 45 78.29 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 56879150 + NM_025009 CEP135 1 0.56 0.35 18 9.96 86.97 28 5.28 No 35 0.74 No 0 0 No -47 0.39 No 49 48.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 56896629 + NM_025009 CEP135 1 0.86 0.24 16 10.68 87.07 42 9.27 Yes 29 1.12 Yes 0 0 No -36 0.62 No 34 50.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 49030724 - NM_001194998 CEP152 1 0.99 0.18 10 10.37 85.45 21 5.82 Yes 8 0.32 No 0 0 No -20 0.83 Yes 50 72.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 49044681 - NM_001194998 CEP152 1 0.22 0.1 7 1.08 74.44 17 4.71 No -3 0.48 No 23 0.77 Yes -20 0.66 Yes 54 58.48 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 49049508 - NM_001194998 CEP152 1 0.35 0.15 10 6.92 78.22 19 6.75 Yes 6 0.61 No 0 0 No -24 0.58 No 46 57.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 49062479 - NM_001194998 CEP152 1 5.21 2.15 62 3.12 78.01 21 6.24 Yes 8 1.11 Yes 0 0 No -25 0.61 No 45 70.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 49063506 - NM_001194998 CEP152 1 1.98 0.76 33 8.57 87.55 24 4.87 No 11 0.65 No 0 0 No -23 0.7 Yes 43 71.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 49073918 - NM_001194998 CEP152 1 0.7 0.28 16 5.83 82.65 26 5.2 No 13 0.73 No 0 0 No -31 0.52 No 45 59.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 49076956 - NM_001194998 CEP152 1 0.23 0.14 9 6.08 81.26 33 8.06 Yes 20 1.03 Yes 0 0 No -32 0.73 Yes 38 82.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 49089930 - NM_001194998 CEP152 1 0.26 0.13 8 -3.97 0 25 4.9 No 12 0.04 No 21 0.67 Yes -24 0.32 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 49089945 - NM_001194998 CEP152 1 0.51 0.22 15 -2.63 66.08 61 8.46 Yes 26 -3.01 No 21 0.67 Yes -19 0.39 No 36 22.74 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 84879115 - NM_014895 CEP162 1 9.63 1.5 54 4.14 72.29 25 5.39 No 44 -3.17 No 0 0 No -25 0.39 No 43 54.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 84879118 - NM_014895 CEP162 1 3.04 0.49 26 1.1 80.65 22 5.1 No 41 -3.17 No 0 0 No -24 0.45 No 46 64.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 84883903 - NM_014895 CEP162 1 2.08 0.36 21 -3.1 0 90 7.38 Yes 43 1.86 Yes 0 0 No -55 0.27 No 15 59.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 84902365 - NM_014895 CEP162 1 2.61 0.53 26 9.54 84.26 34 6.79 Yes 21 1.01 Yes 0 0 No -33 0.74 Yes 37 74.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 84928933 - NM_014895 CEP162 1 21.61 2.71 66 5.95 71.73 27 5.18 No 46 1.52 Yes 26 0.88 Yes -26 0.67 Yes 44 82.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 84932787 - NM_014895 CEP162 1 1.79 0.26 15 4.04 69.1 36 6.98 Yes 23 0.39 No 0 0 No -35 0.93 Yes 35 94.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 117222474 + NM_001271933 CEP164 1 0.27 0.15 8 7.02 84.67 62 11.14 Yes 49 2.17 Yes 25 0.91 Yes -61 0.58 No 29 15.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 117222509 + NM_001271933 CEP164 1 0.32 0.18 10 4.22 0 30 6.62 Yes 17 1.28 Yes 0 0 No -29 0.87 Yes 41 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 117225647 + NM_001271933 CEP164 1 4.89 1.28 45 8.03 75.18 53 6.17 Yes 40 0.39 No 0 0 No -52 0.24 No 18 51.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 117226907 + NM_001271933 CEP164 1 0.96 0.26 16 7.55 80.82 18 5.61 Yes 39 0.17 No 0 0 No -25 0.92 Yes 45 90.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 117230147 + NM_001271933 CEP164 1 8.39 2.29 51 5.84 83.66 41 6.52 Yes 59 -2.38 No 0 0 No -37 0.75 Yes 33 77.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 117233897 + NM_001271933 CEP164 1 1.33 0.38 22 6.6 80.13 23 5.1 No 70 0.88 Yes 0 0 No -22 0.82 Yes 48 88.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 117234668 + NM_001271933 CEP164 1 0.7 0.22 12 9.1 90.5 14 5.98 Yes 68 0.83 Yes 32 0.44 Yes -30 0.58 No 40 65.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 117265640 + NM_001271933 CEP164 1 0.43 0.19 12 -3.99 0 52 7.32 Yes 39 2.04 Yes 0 0 No -44 0.53 No 26 87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 117265841 + NM_001271933 CEP164 1 1.45 0.58 34 -10.69 72.27 34 6 Yes 75 -1.38 No 0 0 No -33 0.75 Yes 37 79.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 117266772 + NM_001271933 CEP164 1 22.95 8.08 72 4.21 82.63 24 5.36 No 58 2.45 Yes 0 0 No -23 0.94 Yes 47 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 117267301 + NM_001271933 CEP164 1 0.77 0.56 28 11.54 88.17 27 5.47 No 52 0.8 Yes 0 0 No -26 0.45 No 44 47.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 117279241 + NM_001271933 CEP164 1 1.21 0.53 26 8.45 90.93 25 7.62 Yes 12 1.07 Yes 24 0.93 Yes -24 0.8 Yes 46 79.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 117282013 + NM_001271933 CEP164 1 1.43 0.49 26 8.15 84.83 40 6.78 Yes 27 0.81 Yes 0 0 No -24 0.68 Yes 31 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 117282143 + NM_001271933 CEP164 1 0.64 0.22 14 11.8 81.34 38 7.17 Yes 41 0.88 Yes 27 0.63 Yes -37 0.66 Yes 33 84.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 243319650 - NM_014812 CEP170 1 29.32 15.94 72 5.4 80.56 28 8.06 Yes 15 1.1 Yes 27 0.72 Yes -27 0.42 No 43 65.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 196435596 - NM_032898 CEP19 1 14.71 3.39 65 8.67 92.67 29 5.38 No 27 1.02 Yes 0 0 No -28 0.7 Yes 42 74.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 12993515 + NM_032142 CEP192 1 1.46 0.19 12 4.85 81.01 27 3.54 No 2 1.29 Yes 0 0 No -27 0.53 No 43 46.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13000310 + NM_032142 CEP192 1 0.26 0.42 22 11.21 91.9 39 8.68 Yes 26 0.5 No 25 0.84 Yes -25 0.61 No 45 67.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 13008466 + NM_032142 CEP192 1 0.1 0.13 9 6.99 0 22 4.46 No 35 1.77 Yes 21 0.26 Yes -21 0.51 No 49 52 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 13002591 + NM_032142 CEP192 1 0.11 0.14 10 5.14 76.48 17 6.23 Yes 4 0.93 Yes 0 0 No -22 0.43 No 48 44.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13006175 + NM_032142 CEP192 1 0.37 0.4 23 12.07 85.22 30 8.45 Yes NA NA NA 0 0 No -33 0.74 Yes 37 86.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 13007079 + NM_032142 CEP192 1 0.21 0.22 11 11.73 88.96 31 6 Yes 27 1.22 Yes 0 0 No -30 0.72 Yes 40 57.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 13008466 + NM_032142 CEP192 1 4.72 5.39 71 6.99 0 22 4.46 No 35 1.77 Yes 21 0.26 Yes -21 0.51 No 49 52 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 13012948 + NM_032142 CEP192 1 0.49 0.76 35 4.06 77.45 15 6.7 Yes 2 1.46 Yes 25 0.85 Yes -22 0.74 Yes 48 83.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 13012997 + NM_032142 CEP192 1 4.51 7.22 71 8.8 90.69 23 5.6 Yes 51 1.73 Yes 0 0 No -22 0.93 Yes 48 94.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 13038372 + NM_032142 CEP192 1 0.68 0.24 15 -1.88 0 18 6.24 Yes 5 1.32 Yes 0 0 No -24 0.41 No 46 31.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13038513 + NM_032142 CEP192 1 4.59 1.56 54 9.54 80.08 28 4.89 No 15 0.39 No 27 0.53 Yes -22 0.52 No 48 60.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 13053709 + NM_032142 CEP192 1 0.35 0.24 13 10.13 86.24 38 5.43 No 25 1.03 Yes 0 0 No -27 0.88 Yes 43 58.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 13057269 + NM_032142 CEP192 1 0.2 0.1 7 12.91 92.17 34 6 Yes 52 0.97 Yes 0 0 No -29 0.69 Yes 41 86.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 13059231 + NM_032142 CEP192 1 0.51 0.18 12 5.97 75.63 29 5.92 Yes 16 0.42 No 0 0 No -28 0.86 Yes 42 80.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 13058292 + NM_032142 CEP192 1 0.65 0.26 14 6.85 84.64 22 4.44 No 9 1.28 Yes 21 0.77 Yes -21 0.47 No 49 63.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 13059231 + NM_032142 CEP192 1 1.83 0.67 25 5.97 75.63 29 5.92 Yes 16 0.42 No 0 0 No -28 0.86 Yes 42 80.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 13063335 + NM_032142 CEP192 1 0.91 0.43 18 6.1 79.53 21 6.26 Yes 8 1.4 Yes 0 0 No -20 0.77 Yes 50 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 13067833 + NM_032142 CEP192 1 0.25 0.13 8 -3.26 0 48 6.58 Yes 35 0.48 No 0 0 No -33 0.68 Yes 37 65.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 13088717 + NM_032142 CEP192 1 0.28 0.17 10 7.5 86.7 37 7.56 Yes 24 2.22 Yes 27 0.43 Yes -22 0.71 Yes 48 66.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 13088752 + NM_032142 CEP192 1 1.06 0.76 39 -3.35 80.51 42 6.63 Yes 59 2.21 Yes 27 0.43 Yes -27 0.49 No 29 58.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 13100276 + NM_032142 CEP192 1 0.28 0.13 9 -0.84 0 17 4.49 No 72 1.18 Yes 24 0.92 Yes -22 0.41 No 54 49.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 13100394 + NM_032142 CEP192 1 1.48 0.72 35 5.93 85.76 32 7.73 Yes 28 1.2 Yes 0 0 No -31 0.67 Yes 39 74.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 13103509 + NM_032142 CEP192 1 0.26 0.22 11 -5.57 80.78 22 5.35 No 47 0.59 No 0 0 No -24 0.52 No 46 54.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 13103873 + NM_032142 CEP192 1 8.24 2.88 62 8.36 87.15 20 5.57 Yes 7 1.73 Yes 19 0.84 Yes -19 0.64 No 51 77.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr18 13116372 + NM_032142 CEP192 1 2.9 0.51 27 3.14 71.71 23 6.12 Yes 10 1.05 Yes 23 0.86 Yes -23 0.75 Yes 47 84.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 13114087 + NM_032142 CEP192 1 0.18 0.11 8 5.62 75.54 22 5.05 No 58 0.06 No 22 0.87 Yes -30 0.4 No 45 35.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 13116372 + NM_032142 CEP192 1 14.81 2.93 63 3.14 71.71 23 6.12 Yes 10 1.05 Yes 23 0.86 Yes -23 0.75 Yes 47 84.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 13116372 + NM_032142 CEP192 1 127.74 24.85 72 3.14 71.71 23 6.12 Yes 10 1.05 Yes 23 0.86 Yes -23 0.75 Yes 47 84.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 13117563 + NM_032142 CEP192 1 0.29 0.14 10 1.57 66.06 30 5.6 Yes 8 0.9 Yes 26 0.84 Yes -29 0.61 No 41 74.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr18 13119290 + NM_032142 CEP192 1 0.74 0.38 22 8.44 87.71 28 9.11 Yes 15 1 Yes 0 0 No -22 0.46 No 48 56.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13124485 + NM_032142 CEP192 1 1.85 0.88 38 4.19 65.32 53 9.07 Yes 40 0.92 Yes 42 0.55 Yes -52 0.5 No 28 66.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 34050162 + NM_001318219 CEP250 1 0.53 0.11 8 6.16 76.78 21 6.62 Yes 8 0.48 No 0 0 No -20 0.47 No 45 50.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 34053858 + NM_001318219 CEP250 1 4.87 0.69 31 8 81.17 30 5.47 No 0 0.33 No 34 0.71 Yes -29 0.7 Yes 41 83.93 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 34055096 + NM_001318219 CEP250 1 2.75 0.39 25 7.43 73.5 29 6.92 Yes 16 1.06 Yes 28 0.9 Yes -28 0.77 Yes 42 81.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 34067383 + NM_001318219 CEP250 1 1.19 0.13 9 9.22 89.69 37 5.01 No -2 1.07 Yes 0 0 No -22 0.32 No 45 70.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 34089673 + NM_001318219 CEP250 1 0.5 0.26 14 -9.1 74.41 130 9.81 Yes 27 1.47 Yes 0 0 No -39 0.81 Yes 31 95.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34095850 + NM_001318219 CEP250 1 0.39 0.18 9 -2.49 0 11 4.11 No 70 0.08 No 23 0.51 Yes -26 0.13 No 60 19.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 88448163 - NM_025114 CEP290 1 3.21 0.82 35 5.95 77.54 25 4.26 No 36 1.82 Yes 0 0 No -24 0.81 Yes 46 77.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 88451883 - NM_025114 CEP290 1 0.68 0.22 13 3.91 73.86 41 6.64 Yes 6 0.75 No 0 0 No -24 0.81 Yes 46 67.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 88487661 - NM_025114 CEP290 1 1.35 0.32 18 -2.05 64.15 55 5.67 Yes 32 1.13 Yes 0 0 No -44 0.38 No 26 39.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 88496719 - NM_025114 CEP290 1 0.74 0.22 13 8.32 72.75 25 5.39 No 12 0.11 No 0 0 No -22 0.56 No 46 68.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 88505125 - NM_025114 CEP290 1 2.1 0.56 30 2.22 0 33 5.15 No 20 0.77 Yes 0 0 No -26 0.96 Yes 44 96.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 88506870 - NM_025114 CEP290 1 0.34 0.11 7 9.47 91.85 33 6.72 Yes 47 0.91 Yes 0 0 No -32 0.54 No 34 70.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 88508398 - NM_025114 CEP290 1 1.11 0.31 19 5.13 74.99 81 6.64 Yes 27 1.1 Yes 0 0 No -26 0.86 Yes 44 83.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 88509348 - NM_025114 CEP290 1 5.12 1.63 49 8.06 79.69 31 6.12 Yes 9 1.07 Yes 21 0.8 Yes -21 0.64 No 36 44.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 88512928 - NM_025114 CEP290 1 3.53 1.31 48 4.25 67.89 15 5.25 No 2 0.41 No 0 0 No -25 0.65 No 45 52.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 93399825 + NM_033395 CEP295 1 0.78 0.22 12 5.63 84.47 21 8.01 Yes 28 1.61 Yes 26 0.74 Yes -20 0.4 No 50 52.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 93405208 + NM_033395 CEP295 1 1.71 0.89 44 1.33 70.03 42 6.49 Yes 58 0.83 Yes 0 0 No -41 0.76 Yes 48 50.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 93407143 + NM_033395 CEP295 1 2.71 1.25 52 4.61 0 37 8.51 Yes 24 1.31 Yes 0 0 No -36 0.63 No 33 66.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 93410256 + NM_033395 CEP295 1 0.51 0.14 9 7.06 73.59 56 8.98 Yes 43 0.99 Yes 0 0 No -44 0.67 Yes 26 77.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 93412581 + NM_033395 CEP295 1 26.79 7.65 70 -1.74 0 47 6.71 Yes 34 0.7 No 0 0 No -46 0.66 No 24 87.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 93428647 + NM_033395 CEP295 1 0.52 0.18 11 -4.02 0 13 4.12 No 54 0.86 Yes 27 0.65 Yes -12 0.5 No 58 60.43 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 93428647 + NM_033395 CEP295 1 10.72 2.99 69 -4.02 0 13 4.12 No 54 0.86 Yes 27 0.65 Yes -12 0.5 No 58 60.43 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 93456218 + NM_033395 CEP295 1 1.82 0.86 39 0.59 0 15 4.36 No 14 0.79 Yes 0 0 No -40 0.69 Yes 30 57.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 93456359 + NM_033395 CEP295 1 0.57 0.31 18 7.13 87.4 22 4.54 No 6 0.29 No 0 0 No -21 0.72 Yes 49 83.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 93457401 + NM_033395 CEP295 1 0.33 0.15 7 4.87 65.48 36 5.95 Yes 55 0.79 Yes 22 0.97 Yes -30 0.54 No 40 79.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 93462627 + NM_033395 CEP295 1 0.51 0.21 11 6.23 79.28 22 4.1 No 9 0.36 No 0 0 No -25 0.7 Yes 45 74.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 93462776 + NM_033395 CEP295 1 31.78 7.53 72 6.75 89.41 18 5.91 Yes 39 1.04 Yes 20 0.52 Yes -29 0.54 No 50 79.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 179954306 + NM_014810 CEP350 1 0.38 0.25 14 8.62 89.1 26 5.89 Yes 13 2.05 Yes 0 0 No -25 0.42 No 44 65.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 179955315 + NM_014810 CEP350 1 0.46 0.29 17 -2.53 0 20 4.57 No 66 0.49 No 0 0 No -19 0.78 Yes 51 59.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 179956377 + NM_014810 CEP350 1 668.11 63.6 72 8.7 92.45 32 5.14 No 11 0.12 No 28 0.86 Yes -31 0.53 No 39 64.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 179956379 + NM_014810 CEP350 1 1.12 0.15 8 -15.56 0 34 5.29 No 13 0.11 No 0 0 No -33 0.53 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 179959876 + NM_014810 CEP350 1 0.95 0.93 45 9.76 86.24 22 7.28 Yes 9 1.65 Yes 0 0 No -21 0.9 Yes 49 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179981045 + NM_014810 CEP350 1 0.35 0.25 13 4.3 0 22 4.48 No 54 -2.81 No 25 0.71 Yes -28 0.43 No 42 85.15 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 179981067 + NM_014810 CEP350 1 0.23 0.18 13 -2.6 0 30 5.56 Yes 76 -2.8 No 0 0 No -29 0.73 Yes 41 74.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 179982967 + NM_014810 CEP350 1 0.11 0.14 10 5.62 76.72 30 5.57 Yes 51 1.21 Yes 18 0.93 Yes -24 0.38 No 46 45.08 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 179984230 + NM_014810 CEP350 1 0.34 0.39 20 2.5 75.49 39 5.98 Yes 51 1.04 Yes 0 0 No -35 0.65 No 44 61.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 179993556 + NM_014810 CEP350 1 10.9 8.96 72 0.96 76.16 46 7.21 Yes 33 0.49 No 0 0 No -25 0.4 No 45 63.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 179993565 + NM_014810 CEP350 1 15.67 12.83 72 -6.96 0 17 4.24 No 42 0.49 No 0 0 No -16 0.61 No 36 42.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 179993572 + NM_014810 CEP350 1 0.14 0.11 7 -2.97 0 10 2.87 No 49 0.48 No 0 0 No -23 0.74 Yes 47 62.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 179993632 + NM_014810 CEP350 1 0.21 0.17 10 4.49 82.06 48 6.85 Yes 35 1.23 Yes 0 0 No -32 0.4 No 23 57.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 180003085 + NM_014810 CEP350 1 0.82 0.96 44 4.2 87.38 21 4.69 No -3 0.35 No 0 0 No -20 0.94 Yes 50 91.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 180006970 + NM_014810 CEP350 1 0.41 0.4 22 6.15 80.12 21 6.24 Yes 8 1.24 Yes 0 0 No -20 0.85 Yes 50 91.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180017673 + NM_014810 CEP350 1 0.35 0.26 16 -6.48 52.27 40 6.88 Yes 27 0.81 Yes 0 0 No -48 0.5 No 22 83.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 180017676 + NM_014810 CEP350 1 0.21 0.17 12 -12.4 0 12 3.87 No 30 0.81 Yes 0 0 No -51 0.39 No 19 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 180021358 + NM_014810 CEP350 1 4.45 4.31 66 8.65 83.64 41 4.54 No 70 -1.95 No 28 0.42 Yes -28 0.52 No 40 71.63 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 180025629 + NM_014810 CEP350 1 0.6 0.58 31 4.07 0 49 7.85 Yes 36 0.92 Yes 0 0 No -48 0.92 Yes 22 96.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180030355 + NM_014810 CEP350 1 0.38 0.35 21 -1.34 0 31 4.34 No 54 0.77 Yes 0 0 No -26 0.82 Yes 60 39.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 180047603 + NM_014810 CEP350 1 0.2 0.21 13 0.36 0 9 3.87 No 40 1.6 Yes 0 0 No -52 0.78 Yes 18 84.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180049624 + NM_014810 CEP350 1 3.41 2.22 58 0.73 53.28 32 5.7 Yes 55 0.44 No 22 0.46 Yes -31 0.65 No 39 48.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 180056733 + NM_014810 CEP350 1 0.82 0.88 41 -0.92 65.05 29 4.1 No 34 1.49 Yes 0 0 No -28 0.44 No 42 60.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 180067125 + NM_014810 CEP350 1 0.29 0.35 17 4.51 87.07 41 6.48 Yes 28 1.53 Yes 0 0 No -40 0.81 Yes 30 92.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180078791 + NM_014810 CEP350 1 0.53 0.47 27 9.04 87.01 35 7.14 Yes 22 1.92 Yes 0 0 No -34 0.93 Yes 36 95.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180080137 + NM_014810 CEP350 1 0.11 0.11 8 -1.36 0 15 3.87 No 18 2.22 Yes 0 0 No -30 0.83 Yes 40 89.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 130061849 - NM_018718 CEP41 1 18.74 4.44 67 11.05 87.72 29 4.83 No 16 0.15 No 28 0.53 Yes -22 0.6 No 42 54.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 130066601 - NM_018718 CEP41 1 6.76 1.43 47 7.86 79.44 23 5.36 No 75 -5.01 No 23 0.7 Yes -23 0.69 Yes 47 75.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 130073883 - NM_018718 CEP41 1 0.27 0.13 8 10.09 93.23 60 8.98 Yes 76 0.51 No 0 0 No -30 0.75 Yes 40 79.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 175218701 + NM_001040157 CEP44 1 1.21 0.1 7 11 90.32 17 5.47 No 4 0.85 Yes 0 0 No -25 0.76 Yes 45 67.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 175224621 + NM_001040157 CEP44 1 0.75 0.31 17 9.37 81.63 28 7.16 Yes 15 1.08 Yes 0 0 No -27 0.79 Yes 43 72.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 175229842 + NM_001040157 CEP44 1 1.2 0.56 30 -2.12 70.65 35 5.27 No 11 0.63 No 0 0 No -23 0.86 Yes 47 85.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 175237320 + NM_001040157 CEP44 1 0.17 0.1 7 0.21 0 29 5.42 No 40 0.96 Yes 0 0 No -23 0.4 No 42 66.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 175239690 + NM_001040157 CEP44 1 0.72 0.22 12 7.95 80.96 41 4.96 No 8 0.1 No 0 0 No -27 0.6 No 43 53.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 175239690 + NM_001040157 CEP44 1 1.62 0.4 17 7.95 80.96 41 4.96 No 8 0.1 No 0 0 No -27 0.6 No 43 53.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 95262847 + NM_018131 CEP55 1 0.18 0.19 11 7.4 73.55 19 5.83 Yes 6 1.06 Yes 24 0.62 Yes -18 0.75 Yes 39 70.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 95262858 + NM_018131 CEP55 1 3.29 3.69 64 1.24 0 14 4.47 No 17 1.07 Yes 24 0.62 Yes -29 0.75 Yes 41 76.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 95267408 + NM_018131 CEP55 1 0.16 0.18 12 8.93 91.69 38 8.46 Yes 58 1.4 Yes 0 0 No -25 0.57 No 45 53.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 95287712 + NM_018131 CEP55 1 0.39 0.51 26 -0.55 0 16 3.87 No 42 0.49 No 0 0 No -38 0.81 Yes 32 88.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 95546067 + NM_001243776 CEP57 1 0.17 0.21 13 6.52 79.15 46 5.19 No 62 0.77 No 30 0.71 Yes -30 0.63 No 40 48.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 95555040 + NM_001243776 CEP57 1 0.93 1.17 46 2.56 0 9 3.87 No 18 1.05 Yes 0 0 No -30 0.76 Yes 40 87.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 109466766 + NM_173830 CEP57L1 1 0.5 0.22 13 7.02 88.27 26 6.52 Yes 62 1.76 Yes 0 0 No -25 0.76 Yes 45 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 109471368 + NM_173830 CEP57L1 1 6.01 2.78 63 6.66 83.37 27 5.29 No 59 1.04 Yes 26 0.92 Yes -26 0.95 Yes 44 95.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 109472109 + NM_173830 CEP57L1 1 1.42 0.54 30 1.58 73.03 19 5 No 6 0.47 No 0 0 No -18 0.62 No 52 50.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 109472112 + NM_173830 CEP57L1 1 1.71 0.63 32 3.14 84.22 22 5.29 No 9 0.48 No 0 0 No -21 0.76 Yes 49 57.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 109479802 + NM_173830 CEP57L1 1 1.33 0.64 33 8.46 90.31 24 4.03 No 37 0.17 No 23 0.78 Yes -23 0.74 Yes 47 60.46 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 109480420 + NM_173830 CEP57L1 1 1.75 0.78 36 2.98 77.65 28 4.91 No 9 0.85 Yes 21 0.83 Yes -21 0.51 No 49 61.12 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 109480543 + NM_173830 CEP57L1 1 0.24 0.13 7 -2.37 69.25 21 4.69 No 8 0.53 No 20 0.94 Yes -20 0.85 Yes 50 66.03 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 134232154 + NM_025180 CEP63 1 0.73 0.46 22 8.63 96.88 20 6.12 Yes 7 0.89 Yes 0 0 No -25 0.8 Yes 45 54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 134251601 + NM_025180 CEP63 1 0.56 0.33 19 3.87 68.21 54 8.34 Yes 26 1.53 Yes 25 0.93 Yes -25 0.79 Yes 45 73.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 134257153 + NM_025180 CEP63 1 3.78 2.32 67 0.95 68.1 30 6.27 Yes 17 1.53 Yes 0 0 No -33 0.36 No 37 61.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 134257156 + NM_025180 CEP63 1 0.49 0.31 17 2.55 66.08 33 6.45 Yes 20 1.54 Yes 0 0 No -36 0.36 No 34 63.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 134264414 + NM_025180 CEP63 1 0.45 0.28 14 5.17 70.64 39 7.16 Yes 26 0.97 Yes 21 0.76 Yes -42 0.75 Yes 28 79.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 134265226 + NM_025180 CEP63 1 1.19 0.18 10 9.59 95.02 32 6.06 Yes 31 0.5 No 0 0 No -31 0.9 Yes 39 91.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 65307409 + NM_015147 CEP68 1 1.94 0.22 12 9.24 92.59 31 6.77 Yes 65 0.98 Yes 0 0 No -30 0.78 Yes 40 62.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 138216170 - NM_001320598 CEP70 1 6.15 0.67 30 7.82 85.05 30 5.21 No 43 0.6 No 24 0.84 Yes -29 0.77 Yes 41 94.37 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 138222720 - NM_001320598 CEP70 1 3.12 0.46 25 4.4 81.05 20 4.76 No 7 0.56 No 0 0 No -19 0.56 No 51 37.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 138241745 - NM_001320598 CEP70 1 0.68 0.14 10 8.52 88.97 32 7.25 Yes 19 1.14 Yes 0 0 No -31 0.88 Yes 39 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 138250466 - NM_001320598 CEP70 1 1.21 0.18 11 9.68 92.47 37 5.79 Yes 24 0.39 No 26 0.78 Yes -32 0.58 No 44 57.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 138261632 - NM_001320598 CEP70 1 1.65 0.31 18 6.55 83.67 23 6.43 Yes 30 1.89 Yes 0 0 No -22 0.63 No 48 53.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 138289328 - NM_001320598 CEP70 1 0.32 0.21 10 -1.31 63.43 20 4.69 No 53 0.75 No 0 0 No -19 0.75 Yes 51 69.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 138289369 - NM_001320598 CEP70 1 1.37 0.63 25 4.2 80.55 25 8 Yes 12 0.76 No 30 0.87 Yes -24 0.8 Yes 46 76.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 138289977 - NM_001320598 CEP70 1 2.18 0.64 34 4.79 80.13 31 4.99 No 6 0.71 No 0 0 No -30 0.46 No 40 47.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 614584 + NM_018140 CEP72 1 1.02 0.11 7 6.4 88.76 35 8.06 Yes 22 1.33 Yes 0 0 No -34 0.84 Yes 36 91.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 620250 + NM_018140 CEP72 1 0.57 0.21 12 5.12 83.4 35 6.75 Yes 75 0.88 Yes 0 0 No -22 0.83 Yes 48 70.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 621646 + NM_018140 CEP72 1 0.37 0.1 7 4.66 78.52 31 5.57 Yes 63 0.85 Yes 0 0 No -30 0.7 Yes 47 58.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 648214 + NM_018140 CEP72 1 1.15 0.31 15 -7.11 63.67 40 7.6 Yes 11 0.46 No 0 0 No -39 0.51 No 31 87.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 12678342 - NM_001271989 CEP76 1 0.63 0.18 11 5.98 84.27 25 6.03 Yes 59 -2.68 No 0 0 No -27 0.32 No 42 53.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 12693418 - NM_001271989 CEP76 1 0.48 0.21 15 6.94 87.44 21 4.71 No 4 0.26 No 0 0 No -20 0.75 Yes 50 65.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 12699900 - NM_001271989 CEP76 1 1.36 0.96 37 3.04 0 39 9 Yes 44 1.75 Yes 23 0.79 Yes -38 0.76 Yes 32 93.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 12701096 - NM_001271989 CEP76 1 0.36 0.1 7 0.72 66.45 24 5.1 No 50 0.92 Yes 0 0 No -21 0.48 No 49 78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 80866823 + NM_001098802 CEP78 1 177.85 41.75 72 3.68 76.81 30 6.85 Yes 17 0.74 No 26 0.78 Yes -35 0.8 Yes 35 84.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 80869758 + NM_001098802 CEP78 1 0.23 0.17 10 -0.25 0 10 3.86 No 48 -2.67 No 22 0.56 Yes -31 0.48 No 37 36.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 80879117 + NM_001098802 CEP78 1 0.5 0.25 11 4.61 78.69 29 4.04 No 65 0.46 No 0 0 No -28 0.7 Yes 42 74.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 80881532 + NM_001098802 CEP78 1 0.89 0.32 17 9.27 87.45 29 5.39 No 45 0.2 No 28 0.8 Yes -28 0.81 Yes 42 70.34 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 94706505 - NM_001346457 CEP83 1 2.18 0.69 26 4.23 72.07 26 5.83 Yes 13 1.81 Yes 0 0 No -25 0.71 Yes 45 69.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94722085 - NM_001346457 CEP83 1 2.35 0.68 38 1.99 69.77 32 7.17 Yes 19 0.85 Yes 31 0.31 Yes -35 0.45 No 35 66.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 94727405 - NM_001346457 CEP83 1 1.9 0.53 30 -6.69 0 14 4.28 No 56 1.12 Yes 0 0 No -48 0.41 No 37 68.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 94727408 - NM_001346457 CEP83 1 0.63 0.15 11 -4.49 0 11 3.91 No 53 1.12 Yes 0 0 No -30 0.44 No 40 74.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 94760611 - NM_001346457 CEP83 1 16.32 4.25 71 9.53 94.99 39 5.82 Yes 8 1.29 Yes 0 0 No -26 0.93 Yes 44 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94762005 - NM_001346457 CEP83 1 0.23 0.1 7 -0.99 59.51 36 6.62 Yes 57 0.4 No 24 0.57 Yes -35 0.5 No 48 37.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 94773844 - NM_001346457 CEP83 1 0.98 0.54 25 12.32 100 48 7.35 Yes 55 1.13 Yes 0 0 No -47 0.88 Yes 23 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94795058 - NM_001346457 CEP83 1 0.4 0.15 8 3.98 81.43 20 6.56 Yes 7 0.52 No 25 0.81 Yes -25 0.78 Yes 45 79.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 94796111 - NM_001346457 CEP83 1 14.57 4.07 65 7.43 80.37 103 10.68 Yes 32 0.76 No 0 0 No -36 0.76 Yes 34 82.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 94796353 - NM_001346457 CEP83 1 0.43 0.14 9 7.52 88.34 40 7.2 Yes 27 1.08 Yes 0 0 No -39 0.89 Yes 31 85.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94796668 - NM_001346457 CEP83 1 5.64 1.61 53 6.81 93.15 33 8.19 Yes 70 1.67 Yes 0 0 No -32 0.69 Yes 38 67.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 94804456 - NM_001346457 CEP83 1 7.37 3.72 69 4.12 60.99 22 5.98 Yes 9 0.7 No 0 0 No -30 0.48 No 40 48.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 94829104 - NM_001346457 CEP83 1 64.17 12.57 72 13.44 94.05 31 6.08 Yes 32 0.66 No 30 0.67 Yes -30 0.84 Yes 40 94.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 94852105 - NM_001346457 CEP83 1 0.96 0.18 12 9.19 95.02 23 4.72 No 10 0.62 No 0 0 No -22 0.95 Yes 48 95.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 26564201 + NM_001281517 CEP85 1 0.92 0.31 19 4.9 74.55 38 6.39 Yes 25 0.98 Yes 0 0 No -37 0.66 No 33 73.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 26564275 + NM_001281517 CEP85 1 0.39 0.11 8 5.89 74.32 50 7.07 Yes 37 1.16 Yes 0 0 No -28 0.57 No 42 86.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 26583110 + NM_001281517 CEP85 1 0.53 0.25 15 4.64 84.41 34 6.57 Yes 42 1.35 Yes 0 0 No -35 0.58 No 45 80.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 26583271 + NM_001281517 CEP85 1 0.4 0.18 11 3.32 78.81 22 5.29 No 66 0.72 No 0 0 No -21 0.41 No 41 50.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 26601024 + NM_001281517 CEP85 1 1 0.4 23 4.37 80.85 19 4.69 No -4 0.17 No 0 0 No -18 0.89 Yes 52 87.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 26601406 + NM_001281517 CEP85 1 0.29 0.14 7 3.07 74.52 17 5.47 No 67 0.56 No 0 0 No -23 0.43 No 47 61.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 26603626 + NM_001281517 CEP85 1 178.21 26.64 72 6.01 83.72 33 9.45 Yes 20 1.54 Yes 29 0.94 Yes -32 0.8 Yes 38 95.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 118794381 - NM_001042475 CEP85L 1 0.3 0.13 8 7.07 83.26 44 8.63 Yes 31 1.4 Yes 0 0 No -31 0.88 Yes 39 92.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 33372938 - NM_032816 CEP89 1 0.92 0.14 7 6.72 81.69 9 5.1 No -4 0.37 No 22 0.91 Yes -19 0.67 Yes 51 86.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 33383576 - NM_032816 CEP89 1 1.82 0.26 13 10.88 86.44 31 5.92 Yes 18 1.97 Yes 0 0 No -30 0.86 Yes 40 94.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 33408718 - NM_032816 CEP89 1 5.78 0.92 41 12.13 89.3 32 5.92 Yes 19 1.22 Yes 0 0 No -31 0.81 Yes 39 86.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 33428027 - NM_032816 CEP89 1 6.26 1.25 51 6.97 85.28 15 4.16 No 2 0.32 No 22 0.45 Yes -22 0.43 No 48 57.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 33462556 - NM_032816 CEP89 1 0.88 0.15 9 1.17 0 9 3.51 No 16 1.51 Yes 22 0.86 Yes -28 0.88 Yes 42 87.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 33462562 - NM_032816 CEP89 1 24.78 4.14 71 8.95 85.05 23 6.45 Yes 10 1.53 Yes 22 0.86 Yes -22 0.87 Yes 48 86.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62503891 + NR_133644 CEP95 1 0.78 0.25 14 10.09 89.93 36 7.03 Yes 0 1.04 Yes 0 0 No -29 0.72 Yes 41 54.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 62504813 + NR_133644 CEP95 1 6.39 1.97 55 7.37 85.07 24 6.49 Yes 11 2.02 Yes 23 0.91 Yes -23 0.73 Yes 47 89.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62511840 + NR_133644 CEP95 1 1.88 0.83 37 12.18 94.11 25 5.39 No 12 0.71 No 24 0.97 Yes -24 0.96 Yes 46 98.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62513836 + NR_133644 CEP95 1 1.27 0.43 23 10.47 94.37 30 7.81 Yes 17 1.6 Yes 0 0 No -29 0.92 Yes 41 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 62513836 + NR_133644 CEP95 1 3.49 1.24 42 10.47 94.37 30 7.81 Yes 17 1.6 Yes 0 0 No -29 0.92 Yes 41 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 62515365 + NR_133644 CEP95 1 0.31 0.1 7 6.91 87.39 18 5.37 No 28 0.41 No 0 0 No -27 0.54 No 43 57.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 62516603 + NR_133644 CEP95 1 0.54 0.32 18 9.12 85.38 34 6.16 Yes 76 -3.52 No 31 0.26 Yes -36 0.73 Yes 34 76.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62522237 + NR_133644 CEP95 1 0.19 0.11 7 6.85 83.64 14 4.36 No 1 1.09 Yes 0 0 No -25 0.9 Yes 45 88.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 62529238 + NR_133644 CEP95 1 0.56 0.39 20 0.68 0 34 6.31 Yes 21 1.12 Yes 0 0 No -33 0.78 Yes 37 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 101447657 + NM_024548 CEP97 1 0.91 0.47 23 5.92 75.63 34 6.85 Yes 21 0.86 Yes 28 0.66 Yes -33 0.77 Yes 37 78.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 101476654 + NM_024548 CEP97 1 22.24 7.83 72 8.14 91.9 23 4.74 No 51 0.53 No 22 0.82 Yes -22 0.68 Yes 48 72.66 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 101485289 + NM_024548 CEP97 1 3.18 1.07 46 6.79 84.35 51 7.71 Yes 38 1.14 Yes 0 0 No -40 0.35 No 30 58.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 101485292 + NM_024548 CEP97 1 0.56 0.21 14 4.96 80.2 54 7.88 Yes 41 1.13 Yes 0 0 No -24 0.79 Yes 27 56.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 101481952 + NM_024548 CEP97 1 0.88 0.35 21 8.7 86.34 30 7.33 Yes 14 0.52 No 29 0.81 Yes -29 0.66 No 41 86.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 101485289 + NM_024548 CEP97 1 0.4 0.15 11 6.79 84.35 51 7.71 Yes 38 1.14 Yes 0 0 No -40 0.35 No 30 58.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 111686104 + NR_138483 CEPT1 1 0.13 0.11 7 5.24 67.71 34 6.07 Yes 41 0.89 Yes 0 0 No -33 0.71 Yes 37 75.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111695895 + NR_138483 CEPT1 1 2.66 5.97 71 5.83 85.71 17 6.1 Yes 18 0.44 No 0 0 No -21 0.43 No 49 54.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 111702052 + NR_138483 CEPT1 1 0.06 0.14 8 5.87 88.84 56 7.63 Yes 71 1.07 Yes 0 0 No -33 0.37 No 44 59.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 111703806 + NR_138483 CEPT1 1 0.39 0.67 34 5.38 78.47 34 5.79 Yes 33 0.89 Yes 0 0 No -32 0.63 No 38 73.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 111720721 + NR_138483 CEPT1 1 0.15 0.29 15 4.74 90.63 36 7.3 Yes 23 0.44 No 0 0 No -35 0.71 Yes 35 70.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 111724908 + NR_138483 CEPT1 1 0.88 1.86 60 9.89 88.55 22 7.03 Yes 76 0.13 No 0 0 No -24 0.34 No 42 45.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 47086076 - NM_022766 CERK 1 0.2 0.17 10 4.67 76.63 19 5.56 Yes 25 1.58 Yes 0 0 No -18 0.66 No 52 58.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 47087920 - NM_022766 CERK 1 0.34 0.25 15 1.62 61.38 26 6.6 Yes 13 2.34 Yes 0 0 No -25 0.73 Yes 45 85.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 47131406 - NM_022766 CERK 1 1.85 0.83 36 9.93 82.25 28 5.52 No 19 0.62 No 27 0.75 Yes -27 0.87 Yes 43 89.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150940651 - NM_022075 CERS2 1 0.92 1.4 46 6.33 90.47 24 4.65 No 26 -0.64 No 23 0.74 Yes -17 0.39 No 47 66.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 150941608 - NM_022075 CERS2 1 4.13 3.81 66 9.05 77.82 34 8 Yes 21 0.88 Yes 33 0.64 Yes -20 0.79 Yes 50 60.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 150944534 - NM_022075 CERS2 1 0.1 0.1 7 8.27 90.17 33 5.73 Yes 37 1.12 Yes 0 0 No -32 0.6 No 38 65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150945213 - NM_022075 CERS2 1 0.1 0.11 8 6.17 81.61 39 5.6 Yes 26 1.21 Yes 0 0 No -38 0.83 Yes 32 72.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8275566 + NM_024552 CERS4 1 0.66 0.13 7 1.65 79.53 21 5.1 No 8 0.39 No 20 0.66 Yes -20 0.75 Yes 50 56.04 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 8306224 + NM_024552 CERS4 1 2.56 0.49 24 7.47 89.77 34 6.32 Yes 21 1.12 Yes 33 0.67 Yes -33 0.86 Yes 37 92.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8315656 + NM_024552 CERS4 1 0.59 0.11 7 8.95 88.46 32 6.27 Yes 67 0.93 Yes 0 0 No -32 0.65 No 38 66.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8315927 + NM_024552 CERS4 1 3.46 0.67 34 10.16 89.49 34 6.06 Yes 21 0.86 Yes 33 0.69 Yes -33 0.79 Yes 37 86.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8315998 + NM_024552 CERS4 1 0.9 0.18 8 -2.04 0 24 4.65 No 47 1.29 Yes 0 0 No -23 0.65 No 47 33.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8279249 + NM_024552 CERS4 1 3.32 0.74 32 7.79 86.9 22 4.04 No 0 1.34 Yes 21 0.93 Yes -21 0.95 Yes 49 93.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8305268 + NM_024552 CERS4 1 0.46 0.11 7 3.93 73.59 25 6.92 Yes 12 1.26 Yes 0 0 No -24 0.91 Yes 46 90.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8305369 + NM_024552 CERS4 1 4.37 0.93 38 6.79 84.6 21 4.9 No 15 -0.67 No 21 0.67 Yes -21 0.83 Yes 49 64.1 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 8306224 + NM_024552 CERS4 1 20.59 4.06 70 7.47 89.77 34 6.32 Yes 21 1.12 Yes 33 0.67 Yes -33 0.86 Yes 37 92.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8315656 + NM_024552 CERS4 1 2.95 0.63 30 8.95 88.46 32 6.27 Yes 67 0.93 Yes 0 0 No -32 0.65 No 38 66.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8315733 + NM_024552 CERS4 1 1.24 0.22 14 4.03 75.36 25 6.06 Yes -1 0.12 No 0 0 No -25 0.47 No 45 60.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8315927 + NM_024552 CERS4 1 24.7 4.83 70 10.16 89.49 34 6.06 Yes 21 0.86 Yes 33 0.69 Yes -33 0.79 Yes 37 86.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8315993 + NM_024552 CERS4 1 7.14 1.46 52 0.98 0 19 4.18 No 42 1.29 Yes 18 0.73 Yes -18 0.85 Yes 52 55.66 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 8315998 + NM_024552 CERS4 1 5.86 1.06 44 -2.04 0 24 4.65 No 47 1.29 Yes 0 0 No -23 0.65 No 47 33.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8319433 + NM_024552 CERS4 1 0.21 0.17 12 -7.57 0 15 4.58 No 65 1.08 Yes 0 0 No -32 0.55 No 61 42.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8320687 + NM_024552 CERS4 1 1.03 0.67 27 7.19 86.56 11 7.14 Yes 73 -3.82 No 22 0.94 Yes -49 0.4 No 21 72.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 8321476 + NM_024552 CERS4 1 0.13 0.1 7 6.41 83.06 24 5 No 74 0.32 No 22 0.96 Yes -23 0.62 No 47 84.4 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 8321706 + NM_024552 CERS4 1 0.72 0.63 27 9.89 86.23 25 5.39 No 26 -1.12 No 0 0 No -24 0.67 Yes 46 64.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 8321774 + NM_024552 CERS4 1 5.39 4.76 72 8.58 84.44 26 5.48 No 13 0.86 Yes 0 0 No -25 0.8 Yes 45 69.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 8321894 + NM_024552 CERS4 1 0.23 0.21 13 8.24 85.05 18 6.78 Yes 2 1.45 Yes 0 0 No -23 0.75 Yes 47 64.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 8323580 + NM_024552 CERS4 1 0.21 0.21 12 -0.95 50.53 33 6.99 Yes 20 0.66 No 0 0 No -32 0.42 No 30 43.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8325272 + NM_024552 CERS4 1 0.29 0.26 16 8.18 85.86 29 7.75 Yes 16 1.57 Yes 0 0 No -28 0.93 Yes 42 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8325516 + NM_024552 CERS4 1 0.17 0.14 8 2.21 64.01 45 6.15 Yes 25 0.93 Yes 0 0 No -37 0.82 Yes 33 82.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8326662 + NM_024552 CERS4 1 0.41 0.39 21 6.51 80.3 57 6.93 Yes 0 0.61 No 0 0 No -24 0.93 Yes 46 85.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 50529647 - NR_138532 CERS5 1 1.24 0.97 41 5.05 84.74 14 5.19 No 1 1.26 Yes 22 0.82 Yes -52 0.7 Yes 18 65.12 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 50538148 - NR_138532 CERS5 1 0.52 0.25 16 4.07 78.14 49 5.75 Yes 13 0.21 No 18 0.86 Yes -25 0.87 Yes 45 87.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50538750 - NR_138532 CERS5 1 1.16 0.53 27 4.02 80.12 24 5.92 Yes 11 0.28 No 0 0 No -23 0.7 Yes 47 68.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 50538753 - NR_138532 CERS5 1 6.98 3.36 68 6.5 85.02 21 5.66 Yes 8 0.3 No 25 0.35 Yes -20 0.6 No 50 64.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 50548104 - NR_138532 CERS5 1 0.33 0.17 10 6.83 91.18 26 5.1 No 73 -2.08 No 25 0.81 Yes -25 0.84 Yes 45 63.85 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 50551404 - NR_138532 CERS5 1 0.38 0.19 13 3.13 74.33 21 4.69 No 61 1.05 Yes 0 0 No -20 0.8 Yes 50 83.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50560100 - NR_138532 CERS5 1 0.27 0.13 8 3.01 0 50 7.21 Yes 37 1.18 Yes 43 0.13 Yes -49 0.91 Yes 21 83.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 169314229 + NM_203463 CERS6 1 0.11 0.19 14 6.36 81.82 22 8.77 Yes 9 1.69 Yes 0 0 No -21 0.78 Yes 49 73.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 169349731 + NM_203463 CERS6 1 0.82 1.39 45 10.59 95.65 24 10.54 Yes 17 -1.82 No 0 0 No -23 0.28 No 47 31.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 169414601 + NM_203463 CERS6 1 0.19 0.26 16 5.8 75.97 22 4.16 No 9 0.5 No 0 0 No -21 0.7 Yes 49 75.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 169506758 + NM_203463 CERS6 1 0.07 0.13 7 12.04 92.26 28 6.99 Yes 55 0.22 No 0 0 No -30 0.88 Yes 40 91.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 169541832 + NM_203463 CERS6 1 0.08 0.14 9 2.35 83.82 27 5.17 No 49 0.62 No 0 0 No -26 0.9 Yes 44 93.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 169548753 + NM_203463 CERS6 1 0.12 0.21 10 5.48 84.82 32 5.8 Yes 25 0.9 Yes 0 0 No -24 0.83 Yes 46 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 169602913 + NM_203463 CERS6 1 0.12 0.13 7 -1.04 68.01 42 6.31 Yes 26 0.36 No 0 0 No -41 0.59 No 37 53.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 169602916 + NM_203463 CERS6 1 0.25 0.29 13 -3.05 56.83 45 6.51 Yes 29 0.35 No 0 0 No -44 0.72 Yes 26 59.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 169613680 + NM_203463 CERS6 1 0.09 0.1 7 7.29 76.65 29 4.29 No 59 -2.85 No 0 0 No -28 0.36 No 42 58.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 169622831 + NM_203463 CERS6 1 0.15 0.17 9 3.87 74.85 46 7.51 Yes 33 1.73 Yes 35 0.93 Yes -35 0.95 Yes 35 91.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 66973129 + NR_036684 CES2 1 0.28 0.19 11 1.18 0 16 4.36 No 19 0.98 Yes 0 0 No -31 0.52 No 39 90.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 66975644 + NR_036684 CES2 1 0.58 0.42 23 5.52 78.94 14 5.1 No 1 1.09 Yes 22 0.7 Yes -27 0.41 No 51 59.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 66975650 + NR_036684 CES2 1 0.71 0.5 23 -1.11 0 15 3.87 No 7 1.06 Yes 22 0.7 Yes -25 0.54 No 51 76.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 89695370 - NM_001297768 CETN3 1 0.21 0.44 24 -3.02 0 23 6.04 Yes 73 0.6 No 29 0.6 Yes -22 0.69 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 89701160 - NM_001297768 CETN3 1 0.06 0.13 7 3.7 68.8 32 6.37 Yes 19 0.19 No 0 0 No -31 0.64 No 39 86.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 89703649 - NM_001297768 CETN3 1 0.27 0.36 24 0.22 69.15 29 5.92 Yes 49 1.04 Yes 25 0.91 Yes -28 0.74 Yes 42 90.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57016081 + NM_001286085 CETP 1 2.02 0.4 23 -5.89 0 28 6.4 Yes 39 0.45 No 0 0 No -27 0.93 Yes 43 89.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 58148785 - NM_013242 CFAP20 1 0.37 0.44 21 5.12 85.49 45 6.02 Yes 64 0.58 No 0 0 No -22 0.48 No 48 48.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 58148842 - NM_013242 CFAP20 1 0.08 0.1 7 3.17 71.78 20 5.48 No 67 0.87 Yes 22 0.91 Yes -19 0.54 No 51 59.65 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 58148960 - NM_013242 CFAP20 1 1.31 1.64 55 5.14 84.05 19 5 No 6 0.28 No 23 0.65 Yes -23 0.56 No 47 53.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 55752790 + NM_001282761 CFAP36 1 0.2 0.13 9 2.83 0 33 6.63 Yes 20 1.56 Yes 0 0 No -32 0.84 Yes 38 80.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55771099 + NM_001282761 CFAP36 1 0.22 0.15 10 2.61 79.31 21 5.59 Yes 42 1.52 Yes 0 0 No -20 0.45 No 16 38.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 55765900 + NM_001282761 CFAP36 1 0.79 0.51 31 8.05 85.05 40 4.72 No 71 0.85 Yes 26 0.68 Yes -26 0.69 Yes 44 89.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 55771076 + NM_001282761 CFAP36 1 0.36 0.21 11 -1.81 70.94 61 8.28 Yes 19 1.53 Yes 0 0 No -31 0.67 Yes 39 75.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55771099 + NM_001282761 CFAP36 1 0.71 0.47 21 2.61 79.31 21 5.59 Yes 42 1.52 Yes 0 0 No -20 0.45 No 16 38.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 113017245 - NM_001164496 CFAP44 1 5.95 0.32 17 11.59 81.44 27 5.74 Yes 25 0.8 Yes 0 0 No -26 0.73 Yes 44 73.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 96898373 + NM_001306084 CFAP54 1 1.46 0.42 22 6.18 92.77 20 4.9 No 64 0.87 Yes 0 0 No -19 0.82 Yes 51 82.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 96902592 + NM_001306084 CFAP54 1 1.35 0.22 12 8.27 77.74 35 7.1 Yes 14 0.95 Yes 0 0 No -34 0.5 No 36 50.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 96927845 + NM_001306084 CFAP54 1 0.62 0.11 7 -7.03 0 10 3.46 No 18 0.54 No 0 0 No -34 0.68 Yes 36 63.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 96935418 + NM_001306084 CFAP54 1 1.61 0.17 9 4.65 74.82 40 7.46 Yes 60 0.54 No 0 0 No -39 0.64 No 12 64.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 96948006 + NM_001306084 CFAP54 1 3.27 0.38 23 4.7 77.09 28 6.15 Yes 15 0.33 No 0 0 No -34 0.39 No 47 36.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 43689721 + NM_001195831 CFAP57 1 0.86 0.19 9 2.39 0 44 6.71 Yes 31 1.49 Yes 0 0 No -43 0.78 Yes 32 71.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186091473 - NM_020827 CFAP97 1 0.07 0.11 8 6.03 84.17 29 5.49 No 34 1.5 Yes 0 0 No -28 0.75 Yes 42 80.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186091495 - NM_020827 CFAP97 1 0.43 0.71 32 6.34 81.27 25 5.92 Yes 12 1.51 Yes 24 0.81 Yes -24 0.82 Yes 46 78.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 186098987 - NM_020827 CFAP97 1 0.16 0.36 21 3.34 83.32 44 8.13 Yes 31 1.38 Yes 0 0 No -43 0.45 No 36 70.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 186110224 - NM_020827 CFAP97 1 2.2 4.92 71 6.73 87.44 20 7.14 Yes 7 1.36 Yes 0 0 No -19 0.77 Yes 51 87.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75335804 - NM_006324 CFDP1 1 0.77 0.86 40 11.95 86.81 25 7 Yes 12 1.89 Yes 24 0.9 Yes -24 0.94 Yes 46 94.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 75396934 - NM_006324 CFDP1 1 0.14 0.18 10 5.28 79.58 31 7.26 Yes 57 1.37 Yes 30 0.84 Yes -30 0.96 Yes 40 97.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 75406467 - NM_006324 CFDP1 1 1.8 2.22 62 11.66 97.85 28 5.47 No 19 0.96 Yes 0 0 No -27 0.91 Yes 43 92.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75414033 - NM_006324 CFDP1 1 1.06 1.35 50 13.25 95.65 32 5.83 Yes 34 -1.74 No 27 0.76 Yes -27 0.74 Yes 43 75.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 75415169 - NM_006324 CFDP1 1 0.16 0.19 9 4.18 88.38 27 4.67 No 2 1.28 Yes 0 0 No -26 0.85 Yes 44 75.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75415189 - NM_006324 CFDP1 1 2.52 3 41 1.43 0 54 10.16 Yes 62 1.14 Yes 0 0 No -23 0.52 No 41 45.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 75428909 - NM_006324 CFDP1 1 0.09 0.11 7 9.39 89.7 27 5.66 Yes 56 0.14 No 0 0 No -26 0.73 Yes 44 76.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 75440597 - NM_006324 CFDP1 1 0.55 0.85 32 -2.95 81.16 26 4.66 No 45 0.43 No 0 0 No -25 0.81 Yes 45 74.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 75445113 - NM_006324 CFDP1 1 0.32 0.49 26 11.73 87.15 40 6.24 Yes 30 1.24 Yes 0 0 No -32 0.5 No 38 61.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65623273 - NM_005507 CFL1 1 0.04 1.96 62 1.37 80.79 23 4.9 No -4 0.75 No 0 0 No -22 0.83 Yes 48 80.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65623678 - NM_005507 CFL1 1 0.01 0.31 15 4.19 69.67 15 6.7 Yes 2 0.47 No 0 0 No -38 0.35 No 56 61.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65623853 - NM_005507 CFL1 1 0.02 0.63 19 6.76 83.27 30 6 Yes 17 0.75 No 0 0 No -29 0.92 Yes 41 88.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65624148 - NM_005507 CFL1 1 0.01 0.17 11 4.22 63.91 31 7.49 Yes 43 -1.46 No 0 0 No -30 0.74 Yes 40 83.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 202000377 + NM_001202518 CFLAR 1 0.19 0.72 36 3.41 0 34 5.68 Yes 40 0.61 No 0 0 No -26 0.88 Yes 44 87.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 202000696 + NM_001202518 CFLAR 1 0.02 0.11 7 -5.59 77.29 33 7 Yes 20 1.28 Yes 0 0 No -32 0.91 Yes 38 90.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 202028557 + NM_001202518 CFLAR 1 2.25 0.35 16 10.82 92.57 62 5.74 Yes 49 1.32 Yes 26 0.65 Yes -26 0.8 Yes 44 68.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 202027339 + NM_001202518 CFLAR 1 0.91 0.14 10 8.35 83.79 32 5.88 Yes 19 0.66 No 0 0 No -31 0.9 Yes 39 93.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 202028557 + NM_001202518 CFLAR 1 1597.21 216.14 72 10.82 92.57 62 5.74 Yes 49 1.32 Yes 26 0.65 Yes -26 0.8 Yes 44 68.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 88106462 - NM_001008390 CGGBP1 1 0.53 0.14 7 2.54 67.78 19 6.16 Yes 47 -2.87 No 28 0.34 Yes -26 0.5 No 44 25.14 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 54981432 + NM_006568 CGRRF1 1 3.97 1.22 47 10.4 95.47 32 6.14 Yes 44 0.97 Yes 0 0 No -19 0.37 No 44 63.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 54981993 + NM_006568 CGRRF1 1 4.33 1.46 51 8.01 85.31 22 7.28 Yes 9 1.24 Yes 0 0 No -21 0.71 Yes 49 77.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 54981996 + NM_006568 CGRRF1 1 0.48 0.14 9 4.38 79 25 7.48 Yes 12 1.21 Yes 0 0 No -24 0.76 Yes 46 83.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 54989710 + NM_006568 CGRRF1 1 0.32 0.18 10 3.99 0 35 6.05 Yes 30 1.58 Yes 0 0 No -31 0.37 No 39 40.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 54989867 + NM_006568 CGRRF1 1 3.26 1.86 62 4.73 85.02 17 6.93 Yes 4 1.26 Yes 25 0.53 Yes -25 0.36 No 45 63.82 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 54989870 + NM_006568 CGRRF1 1 0.24 0.15 9 3.3 86.29 20 7.14 Yes 7 1.23 Yes 0 0 No -19 0.63 No 51 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 54994501 + NM_006568 CGRRF1 1 0.49 0.26 17 10.31 92.91 44 7.47 Yes 31 1.05 Yes 0 0 No -43 0.62 No 27 69.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 55004835 + NM_006568 CGRRF1 1 1.35 0.79 38 4.84 87.26 31 7.34 Yes 18 0.63 No 25 0.86 Yes -30 0.6 No 45 45.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 4410404 + NM_005483 CHAF1A 1 2.94 2.39 66 9.23 94.37 24 6.59 Yes 11 0.62 No 0 0 No -23 0.68 Yes 47 65.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 4412194 + NM_005483 CHAF1A 1 1.29 1.08 43 6.98 91.21 18 5.71 Yes 46 0.16 No 0 0 No -25 0.57 No 45 63.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 4422476 + NM_005483 CHAF1A 1 0.2 0.17 10 7.45 91.07 22 6.47 Yes 9 0.88 Yes 0 0 No -21 0.77 Yes 49 79.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4423286 + NM_005483 CHAF1A 1 0.32 0.35 21 6.81 81.45 28 5.2 No 59 0.97 Yes 0 0 No -27 0.88 Yes 43 96.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4429707 + NM_005483 CHAF1A 1 4.19 3.85 67 4.3 79.02 28 5.8 Yes 52 1.42 Yes 0 0 No -27 0.8 Yes 43 83.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4439917 + NM_005483 CHAF1A 1 2.17 1.47 48 12.61 91.19 26 5.66 Yes 21 0.61 No 0 0 No -33 0.65 No 37 69.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 37765769 + NM_005441 CHAF1B 1 2.47 1.21 44 12.22 88.27 41 6.32 Yes 28 0.01 No 0 0 No -33 0.77 Yes 37 80.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 37767054 + NM_005441 CHAF1B 1 0.27 0.15 8 4.62 0 39 6.52 Yes 26 2.25 Yes 0 0 No -38 0.44 No 32 69.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 37770040 + NM_005441 CHAF1B 1 0.68 0.26 14 10.86 88.27 28 6.08 Yes 15 1.14 Yes 31 0.85 Yes -31 0.89 Yes 39 94.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 37770040 + NM_005441 CHAF1B 1 9.05 4.19 67 10.86 88.27 28 6.08 Yes 15 1.14 Yes 31 0.85 Yes -31 0.89 Yes 39 94.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 37773117 + NM_005441 CHAF1B 1 0.34 0.18 11 1.19 82.95 24 5 No 52 -2 No 0 0 No -18 0.41 No 52 33.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 37774454 + NM_005441 CHAF1B 1 0.27 0.15 10 8.45 88.28 25 5.64 Yes 12 1.15 Yes 0 0 No -24 0.58 No 46 64.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 37776777 + NM_005441 CHAF1B 1 0.21 0.11 7 5.89 90.92 28 5.29 No 29 0.65 No 0 0 No -27 0.47 No 12 52.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 37781810 + NM_005441 CHAF1B 1 0.28 0.19 12 10.44 83.66 32 5.12 No 59 -2.61 No 0 0 No -31 0.92 Yes 39 95.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 37781810 + NM_005441 CHAF1B 1 0.4 0.24 13 10.44 83.66 32 5.12 No 59 -2.61 No 0 0 No -31 0.92 Yes 39 95.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 37788071 + NM_005441 CHAF1B 1 1.07 0.75 37 4.8 83.28 32 8.25 Yes 19 1.61 Yes 0 0 No -29 0.51 No 39 73.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 37788077 + NM_005441 CHAF1B 1 0.37 0.32 15 -0.53 0 9 3.87 No 25 1.6 Yes 0 0 No -37 0.5 No 33 79.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 115086623 + NM_032436 CHAMP1 1 6.29 1.97 56 7.88 81.24 28 6.57 Yes 15 1.26 Yes 0 0 No -27 0.88 Yes 43 92.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 115087537 + NM_032436 CHAMP1 1 8.91 8.56 70 4.74 84.41 28 6.63 Yes 15 1.21 Yes 27 0.86 Yes -27 0.9 Yes 43 90.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 115089265 + NM_032436 CHAMP1 1 11.22 10.6 72 2.27 82.4 26 6.04 Yes 49 1.51 Yes 31 0.74 Yes -34 0.51 No 45 52.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 115089309 + NM_032436 CHAMP1 1 1.87 1.82 54 6.99 77.79 21 5.78 Yes 8 0.89 Yes 0 0 No -20 0.64 No 50 57.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 132526016 - NR_133671 CHCHD3 1 0.05 0.17 10 8.46 85.63 24 6.56 Yes 61 1.55 Yes 0 0 No -23 0.47 No 47 69.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 132540979 - NR_133671 CHCHD3 1 0.06 0.17 9 7.26 87.79 52 7.48 Yes 39 0.91 Yes 0 0 No -26 0.95 Yes 44 94.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 132612292 - NR_133671 CHCHD3 1 0.04 0.14 10 5.75 76.03 40 5.18 No 15 0.95 Yes 0 0 No -27 0.93 Yes 43 87.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 132633105 - NR_133671 CHCHD3 1 0.09 0.32 16 6.27 79.56 50 9.74 Yes 37 2.5 Yes 0 0 No -49 0.7 Yes 21 83.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 132634786 - NR_133671 CHCHD3 1 0.15 0.47 26 6.62 81.4 34 7.23 Yes 21 1.2 Yes 0 0 No -33 0.71 Yes 37 76.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 132658785 - NR_133671 CHCHD3 1 0.52 1.67 60 7.08 80.22 27 4.54 No 48 1.19 Yes 26 0.86 Yes -30 0.78 Yes 40 76.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 132765809 - NR_133671 CHCHD3 1 3.22 8.32 71 8.47 89.65 21 7.29 Yes 68 1.2 Yes 0 0 No -28 0.46 No 42 65.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 132766025 - NR_133671 CHCHD3 1 0.06 0.19 11 8.48 90.37 19 7.16 Yes 53 1.63 Yes 0 0 No -29 0.74 Yes 41 81.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 113343792 + NM_001304354 CHCHD5 1 0.69 0.53 24 5.27 74.78 21 4.62 No 23 1.21 Yes 0 0 No -22 0.35 No 35 47.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 126602036 + NM_001320610 CHCHD6 1 2.5 0.31 18 9.13 89.27 30 6.48 Yes 71 -1.86 No 0 0 No -29 0.73 Yes 41 91.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 126606509 + NM_001320610 CHCHD6 1 1.26 0.13 9 10.4 88.77 61 6.46 Yes 32 1.94 Yes 0 0 No -44 0.37 No 45 74.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 126607298 + NM_001320610 CHCHD6 1 0.93 0.1 7 4.81 77.6 45 7.02 Yes 73 0.18 No 0 0 No -20 0.69 Yes 50 63.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 126653938 + NM_001320610 CHCHD6 1 1.69 0.43 20 8.1 86.76 20 5.91 Yes 41 0.4 No 30 0.25 Yes -30 0.6 No 51 63.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 126666615 + NM_001320610 CHCHD6 1 0.5 0.11 7 8.17 85.96 23 4.8 No 10 1.67 Yes 0 0 No -22 0.89 Yes 48 84.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 126668100 + NM_001320610 CHCHD6 1 0.7 0.18 11 7.35 86.02 23 5.19 No 20 1.16 Yes 23 0.77 Yes -22 0.69 Yes 48 82.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 126671867 + NM_001320610 CHCHD6 1 0.64 0.17 10 5.71 84.57 21 7.68 Yes 65 -1.87 No 24 0.75 Yes -24 0.58 No 46 51.74 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 57127160 + NR_133934 CHCHD7 1 0.21 0.14 9 -5.5 0 31 8.29 Yes 44 0.67 No 0 0 No -33 0.58 No 37 64.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 57127160 + NR_133934 CHCHD7 1 0.24 0.14 9 -5.5 0 31 8.29 Yes 44 0.67 No 0 0 No -33 0.58 No 37 64.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 57128991 + NR_133934 CHCHD7 1 245.43 168.5 72 3.61 77.7 23 7.09 Yes 10 1.05 Yes 26 0.71 Yes -26 0.52 No 44 63.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 98194712 - NM_001270 CHD1 1 0.11 0.15 11 -2.22 0 16 4.12 No 17 0.58 No 0 0 No -29 0.67 Yes 40 69.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 98204982 - NM_001270 CHD1 1 11.11 12.22 72 6.88 92.16 29 6.24 Yes 16 0.33 No 24 0.72 Yes -28 0.53 No 46 66.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 98207925 - NM_001270 CHD1 1 0.06 0.11 8 1.02 62.15 17 4.48 No 40 1.55 Yes 27 0.86 Yes -24 0.47 No 46 35.01 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 98222046 - NM_001270 CHD1 1 0.22 0.28 14 7.66 82.58 20 4.94 No 46 1.19 Yes 0 0 No -25 0.48 No 48 81.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 98222331 - NM_001270 CHD1 1 0.28 0.33 20 10.81 94.37 26 5.11 No 41 -1.98 No 0 0 No -26 0.46 No 37 53.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 98229217 - NM_001270 CHD1 1 0.1 0.13 7 3.96 64.82 31 4.35 No 15 1.24 Yes 0 0 No -27 0.5 No 43 66.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 98232031 - NM_001270 CHD1 1 0.09 0.14 9 3.33 84.58 50 5.63 Yes 37 0.91 Yes 0 0 No -21 0.4 No 49 66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 146715539 + NM_004284 CHD1L 1 0.41 0.15 8 3.74 85.49 17 4.8 No 37 0.89 Yes 0 0 No -20 0.32 No 43 38.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 146726552 + NM_004284 CHD1L 1 1.04 0.74 34 7.68 90.01 26 5.84 Yes 48 0.41 No 0 0 No -25 0.59 No 45 68.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 146736071 + NM_004284 CHD1L 1 0.17 0.21 13 1.68 0 27 6.2 Yes 37 1.18 Yes 24 0.56 Yes -26 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 146736087 + NM_004284 CHD1L 1 2.23 2.35 65 -1.01 0 10 4 No 53 1.17 Yes 0 0 No -31 0.49 No 39 59.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 146736090 + NM_004284 CHD1L 1 0.09 0.1 7 -2.45 0 13 4.36 No 56 1.18 Yes 0 0 No -45 0.46 No 25 63.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 146744107 + NM_004284 CHD1L 1 0.13 0.15 9 6.77 91.56 26 5.54 No 57 0.38 No 0 0 No -21 0.67 Yes 49 54.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 146756047 + NM_004284 CHD1L 1 0.34 0.35 20 7.08 79.52 19 5.74 Yes 43 1.71 Yes 0 0 No -55 0.2 No 15 95.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 93480740 + NM_001271 CHD2 1 0.1 0.15 11 1.68 0 18 5.91 Yes 5 0.47 No 24 0.59 Yes -17 0.41 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 93482812 + NM_001271 CHD2 1 0.18 0.26 14 2.16 0 40 6.1 Yes 20 0.65 No 0 0 No -32 0.92 Yes 38 96.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 93489477 + NM_001271 CHD2 1 0.27 0.46 26 9.92 99.17 24 6.32 Yes 11 0.87 Yes 0 0 No -23 0.86 Yes 47 89.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 93493550 + NM_001271 CHD2 1 0.27 0.28 16 2.9 73.31 30 7.25 Yes 17 2.01 Yes 0 0 No -29 0.87 Yes 41 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 93499158 + NM_001271 CHD2 1 0.22 0.22 12 3.93 74.17 34 5.68 Yes 76 0.5 No 0 0 No -28 0.77 Yes 42 75.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 93508471 + NM_001271 CHD2 1 0.72 0.53 25 6.48 87.04 28 7.05 Yes 38 1.48 Yes 0 0 No -27 0.82 Yes 43 84.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 93521377 + NM_001271 CHD2 1 4.88 3.79 69 9.44 89.3 21 6.15 Yes 48 1.97 Yes 20 0.77 Yes -27 0.52 No 50 60.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 93534922 + NM_001271 CHD2 1 0.26 0.21 10 10.63 89.3 85 11.26 Yes 72 1.33 Yes 0 0 No -33 0.56 No 37 58.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 93538982 + NM_001271 CHD2 1 2.21 1.47 53 4.38 80.11 30 7.29 Yes 17 0.81 Yes 0 0 No -29 0.92 Yes 41 92.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 93541367 + NM_001271 CHD2 1 0.49 0.35 17 -0.02 54.17 27 5.48 No 14 0.32 No 26 0.91 Yes -26 0.83 Yes 44 68.61 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 93541378 + NM_001271 CHD2 1 13.18 10.11 72 -4.15 0 20 4.47 No 25 0.34 No 26 0.91 Yes -19 0.57 No 51 45.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 93547913 + NM_001271 CHD2 1 0.85 0.81 34 4.11 81.7 22 4.99 No 70 1.51 Yes 0 0 No -21 0.89 Yes 49 91.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 93547916 + NM_001271 CHD2 1 0.13 0.13 8 4.5 80.22 25 5.25 No 73 1.5 Yes 0 0 No -24 0.91 Yes 46 88.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7793261 + NM_001005273 CHD3 1 0.33 0.43 23 6.72 79.51 48 7.81 Yes 51 0.38 No 0 0 No -27 0.82 Yes 50 65.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7793893 + NM_001005273 CHD3 1 0.26 0.32 19 1.93 0 33 6.09 Yes 20 0.66 No 27 0.63 Yes -32 0.33 No 35 42.08 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7797444 + NM_001005273 CHD3 1 63.19 55.5 72 3.2 0 21 4.58 No 22 0.64 No 22 0.95 Yes -34 0.74 Yes 36 53.55 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 7797750 + NM_001005273 CHD3 1 2.56 2.28 60 4.65 75.4 23 5.2 No 31 0.33 No 22 0.85 Yes -22 0.7 Yes 48 61.49 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 7800439 + NM_001005273 CHD3 1 1.38 1.28 49 1.64 64.9 19 4.35 No 70 0.44 No 0 0 No -26 0.52 No 30 61.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7800768 + NM_001005273 CHD3 1 0.05 0.11 8 10.81 96.13 27 5.74 Yes 31 0.93 Yes 0 0 No -26 0.71 Yes 44 79.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7803615 + NM_001005273 CHD3 1 0.52 0.83 38 5.27 0 18 4.12 No 36 1.51 Yes 0 0 No -48 0.89 Yes 22 93.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7805902 + NM_001005273 CHD3 1 0.2 0.22 13 6.82 86.37 31 5.74 Yes 18 0.21 No 27 0.66 Yes -30 0.59 No 47 54.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7806184 + NM_001005273 CHD3 1 0.8 1.29 57 4.72 87.28 29 5.92 Yes 74 -3.81 No 0 0 No -28 0.76 Yes 42 68.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7807446 + NM_001005273 CHD3 1 0.67 0.54 31 8.63 84.95 23 5.82 Yes 10 0.28 No 22 0.83 Yes -22 0.69 Yes 43 67.18 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 7808535 + NM_001005273 CHD3 1 0.07 0.1 7 10.74 92.15 35 6.91 Yes 22 2.44 Yes 0 0 No -24 0.82 Yes 46 87.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7810452 + NM_001005273 CHD3 1 0.07 0.17 10 -1.06 0 19 2.85 No 16 0.21 No 0 0 No -31 0.87 Yes 39 85.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7810924 + NM_001005273 CHD3 1 0.08 0.1 7 0.76 0 11 3.87 No 30 1.62 Yes 0 0 No -42 0.69 Yes 28 80.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7811208 + NM_001005273 CHD3 1 1.83 1.25 49 6.5 75.43 16 5.06 No 3 1.47 Yes 22 0.86 Yes -22 0.88 Yes 48 87.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7811208 + NM_001005273 CHD3 1 18.84 15.33 72 6.5 75.43 16 5.06 No 3 1.47 Yes 22 0.86 Yes -22 0.88 Yes 48 87.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7812011 + NM_001005273 CHD3 1 0.43 0.51 27 -4.48 0 23 6.16 Yes 10 1.07 Yes 25 0.85 Yes -22 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 7812036 + NM_001005273 CHD3 1 0.09 0.11 7 0.94 70.38 31 5.57 Yes 35 1.03 Yes 0 0 No -47 0.52 No 23 67.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7813326 + NM_001005273 CHD3 1 0.65 0.46 22 4.42 73.6 52 9.59 Yes 39 2.42 Yes 0 0 No -43 0.26 No 19 53.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7813403 + NM_001005273 CHD3 1 0.26 0.18 11 6.98 86.56 47 9.27 Yes 34 1.86 Yes 0 0 No -29 0.47 No 24 64.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7813756 + NM_001005273 CHD3 1 0.58 0.38 20 -1.23 0 14 4.47 No NA NA NA 29 0.08 Yes -60 0.41 No 10 56.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7813929 + NM_001005273 CHD3 1 0.13 0.15 9 9.32 79.12 18 5.95 Yes 5 2.36 Yes 0 0 No -24 0.41 No 46 47.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6679856 - NM_001273 CHD4 1 0.15 0.58 30 1.47 0 28 8.19 Yes 15 1.51 Yes 0 0 No -27 0.91 Yes 43 92.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6682151 - NM_001273 CHD4 1 0.16 0.47 26 8.49 84.74 31 9.4 Yes 18 1.15 Yes 0 0 No -30 0.84 Yes 40 83.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6683180 - NM_001273 CHD4 1 0.05 0.22 14 3.79 0 22 6.06 Yes 9 1.61 Yes 0 0 No -21 0.41 No 43 55.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6687098 - NM_001273 CHD4 1 0.05 0.24 14 -1.87 78.95 27 6.27 Yes 14 1.12 Yes 40 0.54 Yes -26 0.96 Yes 44 97.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6687284 - NM_001273 CHD4 1 0.91 4.72 70 5.51 83.17 23 5.2 No 58 1.33 Yes 0 0 No -22 0.77 Yes 48 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6687710 - NM_001273 CHD4 1 0.17 0.46 26 -1 69.63 30 6.4 Yes 17 1.72 Yes 0 0 No -29 0.84 Yes 41 92.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6690096 - NM_001273 CHD4 1 0.25 0.99 45 5.99 86.2 22 7.21 Yes 9 0.61 No 0 0 No -21 0.95 Yes 49 92.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6690331 - NM_001273 CHD4 1 0.03 0.13 8 0.55 0 13 4.24 No 31 0.87 Yes 34 0.14 Yes -43 0.95 Yes 27 97.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6692542 - NM_001273 CHD4 1 6.23 14.24 72 -5.7 78.29 29 5.92 Yes 16 1.21 Yes 25 0.82 Yes -28 0.76 Yes 42 88.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6709523 - NM_001273 CHD4 1 33.35 74.31 72 -3.49 0 26 6.08 Yes 54 1.36 Yes 25 0.82 Yes -25 0.83 Yes 56 22.82 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 6711321 - NM_001273 CHD4 1 99.47 184.29 72 6.88 82.45 24 4.96 No 66 -0.49 No 23 0.88 Yes -23 0.87 Yes 47 92.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6716380 - NM_001273 CHD4 1 0.09 0.18 11 7.71 84.21 18 4.67 No 5 1.2 Yes 0 0 No -25 0.8 Yes 45 79.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 40043622 - NM_032221 CHD6 1 1.11 0.51 27 4.91 83.96 31 6.54 Yes 18 0.78 Yes 0 0 No -30 0.55 No 40 62.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 40054030 - NM_032221 CHD6 1 4.65 1.94 62 -1.73 0 28 7.25 Yes 15 1.22 Yes 0 0 No -27 0.67 Yes 43 74.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 40064067 - NM_032221 CHD6 1 0.83 0.26 16 9.51 86.62 30 6.4 Yes 17 1.38 Yes 0 0 No -29 0.85 Yes 41 92.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 40065973 - NM_032221 CHD6 1 0.48 0.24 15 -0.13 85.8 27 6.38 Yes 14 1.26 Yes 24 0.77 Yes -26 0.68 Yes 44 73.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 40076402 - NM_032221 CHD6 1 0.31 0.15 10 7.54 83.87 34 5.57 Yes 67 0.51 No 0 0 No -34 0.9 Yes 36 94.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 40082828 - NM_032221 CHD6 1 0.17 0.1 7 -8.51 62.23 26 6.26 Yes 13 1.3 Yes 0 0 No -25 0.89 Yes 45 81.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 40082859 - NM_032221 CHD6 1 0.21 0.13 7 8.54 84.84 36 5.61 Yes 4 0.35 No 0 0 No -35 0.65 No 35 72.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 40084614 - NM_032221 CHD6 1 0.41 0.11 7 -2.97 0 9 3.87 No 4 0.46 No 0 0 No -30 0.53 No 40 69.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 40098140 - NM_032221 CHD6 1 0.81 0.21 13 10.81 89.08 37 6.48 Yes 69 -4.43 No 0 0 No -28 0.53 No 47 42.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 40101068 - NM_032221 CHD6 1 1.55 0.51 30 6.4 91.22 22 6.71 Yes 9 0.21 No 0 0 No -21 0.85 Yes 49 86.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 40112154 - NM_032221 CHD6 1 0.92 0.47 25 -2.53 0 9 3.87 No 35 0.09 No 0 0 No -60 0.59 No 41 67.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 40114980 - NM_032221 CHD6 1 2.08 0.72 39 8.73 84.45 32 8.1 Yes 75 2.4 Yes 0 0 No -32 0.82 Yes 38 84.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 40162121 - NM_032221 CHD6 1 0.46 0.24 15 5.02 81.95 50 7.26 Yes 37 1.73 Yes 0 0 No -26 0.59 No 39 64.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 40169416 - NM_032221 CHD6 1 1.02 0.6 27 6.64 80.8 31 5.67 Yes 15 0.66 No 0 0 No -30 0.84 Yes 40 77.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 40178845 - NM_032221 CHD6 1 0.15 0.1 7 4.68 70.05 24 4.52 No 11 0.08 No 0 0 No -24 0.72 Yes 46 71.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 40178980 - NM_032221 CHD6 1 0.66 0.4 20 4.91 74.37 37 6.56 Yes 62 0.54 No 0 0 No -24 0.36 No 46 42.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 40182351 - NM_032221 CHD6 1 0.53 0.15 10 7.45 92.19 27 5.22 No 14 0.44 No 0 0 No -26 0.94 Yes 44 82.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 40192791 - NM_032221 CHD6 1 3.51 1.03 47 5.49 85.99 16 3.99 No 3 1.45 Yes 23 0.91 Yes -23 0.92 Yes 47 96.51 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 40196241 - NM_032221 CHD6 1 0.94 0.28 16 8.41 91.39 24 7.14 Yes 11 2.22 Yes 0 0 No -23 0.95 Yes 47 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 40243602 - NM_032221 CHD6 1 2.8 0.76 37 12.5 96.32 40 6.78 Yes 41 1.61 Yes 0 0 No -31 0.65 No 45 64.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 61670043 + NM_017780 CHD7 1 0.35 0.22 13 7.14 80.08 40 7.71 Yes 27 0.43 No 0 0 No -39 0.51 No 31 49.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 61697308 + NM_017780 CHD7 1 0.44 0.22 12 11.08 96.53 32 7.45 Yes 53 0.52 No 0 0 No -24 0.52 No 46 45.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 61712949 + NM_017780 CHD7 1 0.42 0.21 13 -0.18 82.86 38 5 No 25 0.17 No 0 0 No -32 0.71 Yes 38 70.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 61716066 + NM_017780 CHD7 1 0.67 0.28 15 5.78 86.26 36 5.69 Yes 23 1.47 Yes 0 0 No -28 0.4 No 42 71.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 61720778 + NM_017780 CHD7 1 1.09 0.47 27 1.64 81.13 23 6.78 Yes 10 0.89 Yes 0 0 No -29 0.48 No 41 74.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 61721891 + NM_017780 CHD7 1 0.68 0.35 17 9.97 91.2 26 8.16 Yes 13 1.71 Yes 0 0 No -25 0.94 Yes 45 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 61742868 + NM_017780 CHD7 1 0.29 0.15 8 0.66 0 20 4.58 No 50 1.52 Yes 19 0.75 Yes -19 0.77 Yes 51 62.67 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 61757308 + NM_017780 CHD7 1 0.78 0.39 23 7.42 82.03 36 7.21 Yes 23 1.21 Yes 0 0 No -35 0.88 Yes 35 90.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 61759058 + NM_017780 CHD7 1 3.44 0.92 39 6.16 71.04 55 8.76 Yes 60 1.07 Yes 0 0 No -25 0.56 No 45 49.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 61766924 + NM_017780 CHD7 1 48.13 11.63 71 5.61 92.81 17 5.21 No 4 1.57 Yes 0 0 No -26 0.66 No 44 64.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 61774757 + NM_017780 CHD7 1 3.81 1.67 56 1.06 79.52 25 7.29 Yes 69 1.35 Yes 25 0.68 Yes -24 0.54 No 46 54.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 61774787 + NM_017780 CHD7 1 1.98 0.92 41 10 90.62 27 4.73 No 42 0.74 No 25 0.68 Yes -25 0.78 Yes 45 65.47 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 61777494 + NM_017780 CHD7 1 1.41 0.56 30 4.5 76.79 25 5.55 No 50 0.4 No 0 0 No -24 0.72 Yes 46 74.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 21854296 - NM_020920 CHD8 1 0.09 0.11 7 2.6 80.63 28 6.97 Yes 24 -2.45 No 0 0 No -27 0.78 Yes 43 72.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 21857456 - NM_020920 CHD8 1 0.19 0.26 13 1.41 82.57 23 5.95 Yes 10 1.02 Yes 0 0 No -23 0.51 No 47 63.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 21858230 - NM_020920 CHD8 1 0.1 0.14 9 4.84 82.77 18 5.48 No 5 1.45 Yes 0 0 No -17 0.73 Yes 53 87.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 21858988 - NM_020920 CHD8 1 0.69 0.82 35 4.47 78.61 40 8.22 Yes 27 1.91 Yes 0 0 No -39 0.57 No 31 89.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 21859661 - NM_020920 CHD8 1 0.32 0.36 21 -0.85 0 21 4.58 No 60 -1.53 No 0 0 No -20 0.68 Yes 50 75.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 21868491 - NM_020920 CHD8 1 12.77 14.39 72 2.32 74.27 28 5.02 No 24 1.34 Yes 21 0.79 Yes -27 0.33 No 23 52.43 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 21876648 - NM_020920 CHD8 1 0.26 0.36 21 9.33 94.12 21 5.18 No 8 0.48 No 0 0 No -20 0.54 No 50 77.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 21886513 - NM_020920 CHD8 1 0.16 0.25 15 6.47 85.02 19 7.01 Yes 62 1.4 Yes 0 0 No -23 0.54 No 47 71.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 21889383 - NM_020920 CHD8 1 0.15 0.24 15 5.77 88.04 62 7.31 Yes 57 -1.84 No 0 0 No -29 0.3 No 41 41.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 21896431 - NM_020920 CHD8 1 0.52 0.4 21 -3.53 0 22 3.17 No 26 -3.86 No 26 0.57 Yes -19 0.8 Yes 51 48.64 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 21899163 - NM_020920 CHD8 1 0.67 0.11 7 3.87 80.16 23 6 Yes 10 2 Yes 0 0 No -22 0.91 Yes 48 92.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 21899722 - NM_020920 CHD8 1 9.22 1.25 49 -0.21 0 18 4.02 No 38 1.21 Yes 21 0.85 Yes -17 0.77 Yes 20 66.48 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 21899732 - NM_020920 CHD8 1 1.52 0.21 11 3.26 70.24 41 8.54 Yes 28 1.21 Yes 21 0.85 Yes -30 0.58 No 30 79.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 21899837 - NM_020920 CHD8 1 1.79 0.21 12 13.1 77.66 29 5.92 Yes 62 0.3 No 0 0 No -21 0.42 No 43 57.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 21899884 - NM_020920 CHD8 1 1.39 0.21 12 7.64 91.35 28 6.56 Yes 60 1.45 Yes 21 0.9 Yes -27 0.92 Yes 43 97.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 53195687 + NM_025134 CHD9 1 0.3 0.17 8 4.99 83.86 35 6.4 Yes 22 1.73 Yes 0 0 No -34 0.86 Yes 36 91.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53203157 + NM_025134 CHD9 1 0.31 0.21 13 3.57 77.24 24 4.49 No 73 0.68 No 0 0 No -23 0.41 No 47 45.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 53207477 + NM_025134 CHD9 1 0.23 0.15 7 7.18 85.05 22 8.7 Yes 9 1.13 Yes 0 0 No -31 0.5 No 44 55.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 53209396 + NM_025134 CHD9 1 0.79 0.44 20 9.29 86.61 38 5.99 Yes 39 0.55 No 0 0 No -23 0.87 Yes 47 75.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 53220364 + NM_025134 CHD9 1 0.45 0.29 18 9.38 98.54 21 5.57 Yes 8 1.56 Yes 0 0 No -20 0.59 No 50 66.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 53233717 + NM_025134 CHD9 1 0.24 0.15 7 3.31 73.39 43 7.22 Yes 46 0.82 Yes 0 0 No -25 0.94 Yes 45 87.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53242176 + NM_025134 CHD9 1 1.89 1.18 43 -1.75 80.26 18 4.78 No 5 0.23 No 0 0 No -28 0.5 No 39 67.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 53257361 + NM_025134 CHD9 1 2.28 2.97 61 10.45 88.05 27 6.4 Yes 14 1.33 Yes 26 0.92 Yes -26 0.76 Yes 44 69.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 53265577 + NM_025134 CHD9 1 0.48 0.36 21 3.55 75.18 24 5.29 No 63 0.42 No 0 0 No -23 0.7 Yes 49 61.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 53265802 + NM_025134 CHD9 1 0.38 0.5 26 10.12 94.56 29 4.98 No 16 0.88 Yes 0 0 No -29 0.33 No 31 53.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 53273653 + NM_025134 CHD9 1 0.18 0.18 8 -1.09 74.01 23 5.29 No 10 1.35 Yes 0 0 No -22 0.73 Yes 48 70.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53284262 + NM_025134 CHD9 1 0.26 0.15 10 9.18 81.72 30 5.57 Yes 59 1.46 Yes 29 0.77 Yes -24 0.51 No 46 63.8 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 53285794 + NM_025134 CHD9 1 0.44 0.35 20 -1.36 53.82 39 6.42 Yes 74 0.29 No 0 0 No -38 0.92 Yes 32 95.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 53301210 + NM_025134 CHD9 1 0.56 0.51 31 -0.1 0 26 5.2 No 13 0.31 No 0 0 No -25 0.53 No 45 72.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 53327212 + NM_025134 CHD9 1 0.14 0.13 8 10.67 83.7 35 6.91 Yes 22 1.41 Yes 0 0 No -34 0.63 No 36 76.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 53337427 + NM_025134 CHD9 1 0.3 0.32 16 7.62 78.61 28 6.22 Yes 52 0.82 Yes 0 0 No -27 0.94 Yes 43 97.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53340145 + NM_025134 CHD9 1 0.54 0.14 7 4.04 73.48 18 6.24 Yes -1 0.48 No 25 0.54 Yes -24 0.63 No 46 59.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 53340145 + NM_025134 CHD9 1 138.52 35.83 72 4.04 73.48 18 6.24 Yes -1 0.48 No 25 0.54 Yes -24 0.63 No 46 59.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 53353724 + NM_025134 CHD9 1 4.01 1.96 61 3.99 86.5 17 4.8 No 13 1.3 Yes 25 0.78 Yes -25 0.62 No 45 94.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 53354279 + NM_025134 CHD9 1 0.52 0.26 16 6.54 71.21 25 6.89 Yes 12 0.69 No 0 0 No -24 0.39 No 38 60.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 53355074 + NM_025134 CHD9 1 4.03 1.99 61 9.8 85.59 33 4.9 No 44 0.76 No 24 0.51 Yes -21 0.43 No 49 61.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 53852164 - NM_018397 CHDH 1 0.44 0.28 16 0.94 84.21 22 4.8 No 69 1.79 Yes 0 0 No -21 0.96 Yes 49 96.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53853359 - NM_018397 CHDH 1 3.96 1.61 53 4.15 89.34 15 6.92 Yes 2 1 Yes 0 0 No -22 0.55 No 42 67.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 53853359 - NM_018397 CHDH 1 0.59 0.15 7 4.15 89.34 15 6.92 Yes 2 1 Yes 0 0 No -22 0.55 No 42 67.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 53855750 - NM_018397 CHDH 1 2.71 1.14 42 6.97 81.34 28 5.26 No 15 0.51 No 0 0 No -27 0.86 Yes 43 81.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53861662 - NM_018397 CHDH 1 0.61 0.26 14 6.9 85.63 35 5.07 No 8 1.27 Yes 0 0 No -34 0.45 No 36 73.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 53865208 - NM_018397 CHDH 1 1.27 0.57 27 10.31 92.23 33 5.92 Yes 20 1.16 Yes 0 0 No -32 0.79 Yes 38 91.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53873660 - NM_018397 CHDH 1 0.35 0.19 12 7.99 87.47 27 5.74 Yes 37 0.25 No 0 0 No -26 0.76 Yes 44 77.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53874527 - NM_018397 CHDH 1 0.52 0.21 11 6.71 92 27 5.29 No 28 0.84 Yes 0 0 No -26 0.72 Yes 44 65.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 53876007 - NM_018397 CHDH 1 1.47 0.19 11 8.78 87.16 29 5.93 Yes 20 2.07 Yes 0 0 No -28 0.61 No 38 73.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 125499259 + NM_001274 CHEK1 1 0.8 0.94 37 3.43 67.78 26 5.33 No 29 -3.05 No 28 0.73 Yes -20 0.42 No 50 54.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 125499438 + NM_001274 CHEK1 1 0.1 0.14 10 3.81 79.58 42 6.32 Yes 3 0.68 No 0 0 No -23 0.58 No 41 25.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29091198 - NM_001005735 CHEK2 1 2.4 0.89 41 3.81 0 36 5.88 Yes 68 0.85 Yes 29 0.92 Yes -35 0.56 No 41 60.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 29093118 - NM_001005735 CHEK2 1 1.06 0.43 23 5.85 83.71 41 5.77 Yes 57 1.21 Yes 0 0 No -29 0.8 Yes 41 76.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29117620 - NM_001005735 CHEK2 1 3.89 0.89 39 7.96 87 28 7.04 Yes 15 1.08 Yes 27 0.89 Yes -27 0.91 Yes 43 94.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29120912 - NM_001005735 CHEK2 1 2.29 0.64 29 9.86 79.71 32 5.66 Yes 38 0.55 No 31 0.8 Yes -31 0.72 Yes 39 61.55 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 29134027 - NM_001005735 CHEK2 1 6.91 1.22 49 8.98 85.01 21 7.21 Yes 8 1.45 Yes 20 0.7 Yes -20 0.77 Yes 50 90.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29134186 - NM_001005735 CHEK2 1 0.65 0.11 8 2.99 0 40 6.55 Yes 27 0.72 No 0 0 No -39 0.93 Yes 31 97.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 16632529 - NM_006387 CHERP 1 0.18 0.22 15 9.28 83.95 35 5.38 No 4 2.42 Yes 0 0 No -34 0.52 No 36 51.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 16641477 - NM_006387 CHERP 1 0.21 0.31 17 1.84 0 18 4.24 No 26 2.59 Yes 0 0 No -38 0.9 Yes 32 94.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16641706 - NM_006387 CHERP 1 0.3 0.32 17 -4.33 51.89 13 5.29 No 0 1.29 Yes 26 0.8 Yes -47 0.44 No 58 43.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 16641725 - NM_006387 CHERP 1 11.6 12.24 72 5.24 78.79 29 6.93 Yes 16 0.62 No 28 0.89 Yes -28 0.88 Yes 42 80.31 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133424810 - NM_001161344 CHFR 1 1.14 0.68 31 5.05 82.81 27 4.41 No 41 1.01 Yes 26 0.75 Yes -23 0.45 No 43 42.75 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 133424844 - NM_001161344 CHFR 1 3.94 2.13 61 7.31 85.27 20 5.86 Yes 7 1.05 Yes 26 0.86 Yes -26 0.61 No 44 78.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 133428316 - NM_001161344 CHFR 1 0.36 0.13 7 -4.73 0 11 4.12 No 55 2.35 Yes 0 0 No -26 0.72 Yes 44 39.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 133428321 - NM_001161344 CHFR 1 117.01 41.67 72 4.48 76.59 63 10.49 Yes 50 2.36 Yes 18 0.66 Yes -21 0.74 Yes 49 64.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 133432249 - NM_001161344 CHFR 1 11.13 7.6 72 4.49 83.95 30 9.37 Yes 17 1.68 Yes 0 0 No -29 0.78 Yes 41 96.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133435836 - NM_001161344 CHFR 1 0.79 0.97 41 4.87 78.77 39 7.86 Yes 26 0.82 Yes 29 0.79 Yes -33 0.51 No 37 60.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 133439012 - NM_001161344 CHFR 1 4.55 2.31 61 8.21 86.16 31 6.21 Yes 72 1.85 Yes 30 0.72 Yes -30 0.84 Yes 40 88.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133439012 - NM_001161344 CHFR 1 0.81 0.44 20 8.21 86.16 31 6.21 Yes 72 1.85 Yes 30 0.72 Yes -30 0.84 Yes 40 88.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133446262 - NM_001161344 CHFR 1 16.63 1.83 57 6.92 83.78 23 4.13 No 33 -2.05 No 22 0.63 Yes -22 0.49 No 48 70.6 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 133446370 - NM_001161344 CHFR 1 1.69 0.13 9 -2.7 0 9 3.87 No 33 0.61 No 0 0 No -45 0.79 Yes 25 70.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133446376 - NM_001161344 CHFR 1 1.56 0.17 12 -3.3 0 13 4.24 No 27 0.61 No 0 0 No -39 0.91 Yes 31 79.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133446385 - NM_001161344 CHFR 1 467.57 51.15 72 0.85 59.32 31 5.83 Yes 18 0.59 No 30 0.95 Yes -30 0.93 Yes 40 88.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133448584 - NM_001161344 CHFR 1 0.18 0.19 11 4.28 91.12 25 6.24 Yes 70 -5.19 No 0 0 No -24 0.92 Yes 46 84.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133448775 - NM_001161344 CHFR 1 0.33 0.33 18 8.23 80.57 33 7.17 Yes 20 1.45 Yes 32 0.72 Yes -32 0.84 Yes 38 83.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133449009 - NM_001161344 CHFR 1 0.17 0.15 9 -0.88 74.43 22 4.69 No 9 0.99 Yes 24 0.36 Yes -22 0.76 Yes 49 65.69 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 133452207 - NM_001161344 CHFR 1 4.85 4.67 71 4.05 82.37 36 5.92 Yes 23 0.51 No 0 0 No -35 0.67 Yes 35 92.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133456276 - NM_001161344 CHFR 1 0.46 0.32 13 9.36 91.85 30 6 Yes 59 0.62 No 0 0 No -29 0.94 Yes 41 91.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133456656 - NM_001161344 CHFR 1 0.2 0.15 11 7.75 72.85 55 8.08 Yes 61 0.49 No 0 0 No -22 0.67 Yes 48 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 111773487 + NM_001025199 CHI3L2 1 0.32 1.38 40 3.33 82.46 41 7.27 Yes 28 2.09 Yes 0 0 No -22 0.52 No 30 60.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 111778263 + NM_001025199 CHI3L2 1 0.04 0.18 12 -13.13 78.34 29 6.79 Yes 67 -2.32 No 0 0 No -27 0.83 Yes 43 90.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 111778647 + NM_001025199 CHI3L2 1 0.01 0.1 7 -3.73 72.75 36 7.02 Yes 48 0.46 No 0 0 No -35 0.85 Yes 35 91.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 72798539 + NM_001039840 CHIC1 1 4.27 1.26 52 0.79 78.18 23 5.89 Yes 54 0.32 No 22 0.71 Yes -22 0.61 No 48 71.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 72806468 + NM_001039840 CHIC1 1 0.53 0.18 11 10.09 93.48 28 5.3 No 25 0.38 No 0 0 No -27 0.75 Yes 43 80.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 72906430 + NM_001039840 CHIC1 1 0.91 0.28 15 8.29 80.74 65 8.65 Yes 45 1.4 Yes 31 0.73 Yes -31 0.82 Yes 39 62.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 54908913 - NM_012110 CHIC2 1 1.48 0.88 46 8.51 82.05 35 8.4 Yes 38 1.44 Yes 0 0 No -34 0.82 Yes 36 82.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54915274 - NM_012110 CHIC2 1 1.22 0.86 41 0.05 0 19 6.14 Yes 53 0.63 No 0 0 No -35 0.67 Yes 35 76.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 874911 - NM_001142675 CHID1 1 0.92 0.53 23 11.59 95.85 19 6 Yes 6 1.3 Yes 18 0.65 Yes -18 0.94 Yes 52 92.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 882516 - NM_001142675 CHID1 1 56.52 37.9 72 7.53 85.56 28 8.76 Yes 15 1.62 Yes 27 0.93 Yes -27 0.92 Yes 43 94.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 901044 - NM_001142675 CHID1 1 0.09 0.11 8 11.37 94.04 67 9.32 Yes 54 1.72 Yes 0 0 No -30 0.54 No 54 68.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 902328 - NM_001142675 CHID1 1 0.16 0.22 12 -2.83 0 40 5.32 No 27 1.92 Yes 20 0.83 Yes -23 0.62 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 902335 - NM_001142675 CHID1 1 0.09 0.14 9 -1.53 0 33 5.01 No 20 1.95 Yes 20 0.83 Yes -36 0.6 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 903779 - NM_001142675 CHID1 1 0.54 0.6 30 6.71 88.76 48 7.32 Yes 70 -2.53 No 25 0.46 Yes -25 0.63 No 45 89.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 67829298 - NM_001277 CHKA 1 3.12 2.13 63 3.92 73.83 26 5.29 No 23 1.16 Yes 25 0.96 Yes -25 0.94 Yes 45 98.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67832082 - NM_001277 CHKA 1 0.57 0.54 28 4.99 90.34 20 4.94 No 26 1.69 Yes 0 0 No -19 0.59 No 32 66.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67833506 - NM_001277 CHKA 1 0.24 0.13 9 4.88 75.95 35 7.31 Yes 22 1.39 Yes 0 0 No -34 0.55 No 36 88.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 67839845 - NM_001277 CHKA 1 0.5 0.28 16 8.34 87.15 22 6.95 Yes 63 1.73 Yes 0 0 No -25 0.7 Yes 45 72.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67840293 - NM_001277 CHKA 1 0.95 0.64 32 7.67 87.82 18 4.65 No 71 0.83 Yes 0 0 No -21 0.96 Yes 49 95.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67849316 - NM_001277 CHKA 1 6.99 1.65 55 11.24 92.42 20 5.99 Yes 32 1.09 Yes 21 0.64 Yes -19 0.84 Yes 51 85.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67849988 - NM_001277 CHKA 1 0.4 0.11 8 7.52 82.24 46 8.15 Yes 33 1.36 Yes 22 0.39 Yes -46 0.78 Yes 24 90.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67857348 - NM_001277 CHKA 1 3.77 0.83 37 9.44 92.64 31 5.95 Yes 61 -3.93 No 24 0.51 Yes -30 0.76 Yes 40 75.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67858557 - NM_001277 CHKA 1 0.66 0.17 8 2.13 65.32 33 6.72 Yes 20 1.29 Yes 0 0 No -32 0.71 Yes 38 70.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67859173 - NM_001277 CHKA 1 0.77 0.17 7 7.18 80.67 20 5.81 Yes 7 1.25 Yes 0 0 No -19 0.43 No 39 30.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 51019576 - NR_027928 CHKB-CPT1B 1 0.15 0.14 10 3.25 80.22 18 3.57 No 58 -4.55 No 0 0 No -22 0.65 No 48 73.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 51019997 - NR_027928 CHKB-CPT1B 1 1.62 0.89 42 4.02 65.61 17 3.93 No 49 2.51 Yes 0 0 No -43 0.36 No 19 36.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 51020038 - NR_027928 CHKB-CPT1B 1 1.95 1.13 48 6.42 80.72 21 7.07 Yes 8 2.1 Yes 0 0 No -20 0.67 Yes 50 78.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 51020525 - NR_027928 CHKB-CPT1B 1 2.23 0.65 34 5.27 81.45 29 5.21 No 26 1.36 Yes 26 0.71 Yes -26 0.82 Yes 44 80.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 367649 + NM_001253387 CHL1 1 0.23 0.14 9 2.62 0 17 4.12 No 49 1.64 Yes 0 0 No -29 0.38 No 41 55.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 404903 + NM_001253387 CHL1 1 1.02 0.25 17 1.38 0 34 6.29 Yes 59 0.35 No 0 0 No -33 0.6 No 43 64.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 420258 + NM_001253387 CHL1 1 1.24 0.65 38 9.22 90.55 40 5.95 Yes 67 -2.76 No 0 0 No -25 0.63 No 45 81.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 444461 + NM_001253387 CHL1 1 2.19 0.88 36 7.95 86.16 19 7.41 Yes 6 0.52 No 0 0 No -26 0.65 No 44 65.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 85219054 - NM_001320959 CHM 1 3.6 1.31 56 0.75 0 38 5.18 No 75 -3.7 No 0 0 No -24 0.84 Yes 46 87.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 85226591 - NM_001320959 CHM 1 24.21 9.28 72 9.2 80.02 26 7.74 Yes 13 0.79 Yes 29 0.44 Yes -26 0.62 No 41 53.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 85236811 - NM_001320959 CHM 1 0.24 0.17 10 -3.36 65.37 33 6.39 Yes 40 0.42 No 0 0 No -32 0.68 Yes 29 56.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 85237775 - NM_001320959 CHM 1 0.39 0.19 11 3.87 86.09 65 6.39 Yes 26 0.45 No 0 0 No -20 0.3 No 50 47.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 85237969 - NM_001320959 CHM 1 0.26 0.13 8 6.05 84.97 43 3.71 No 70 -2.38 No 0 0 No -25 0.77 Yes 45 67.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 85241641 - NM_001320959 CHM 1 1.34 0.76 34 9.16 90.62 31 5.83 Yes 44 -2.21 No 0 0 No -27 0.55 No 43 65.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 85242095 - NM_001320959 CHM 1 0.39 0.24 12 10.6 82.33 52 6.47 Yes 43 1.38 Yes 0 0 No -42 0.49 No 28 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 89714887 - NR_046418 CHMP1A 1 0.15 0.26 13 3.48 0 12 5.57 Yes 43 -2.39 No 0 0 No -11 0.66 No 59 60.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89720429 - NR_046418 CHMP1A 1 0.09 0.1 7 9.1 74.14 31 5.74 Yes NA NA NA 0 0 No -26 0.66 No 44 73.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 89721019 - NR_046418 CHMP1A 1 0.12 0.14 8 5.74 78.66 15 5.28 No 2 0.49 No 0 0 No -30 0.62 No 40 75.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 59063547 - NM_014453 CHMP2A 1 0.05 0.18 12 -3.01 0 15 3.87 No 13 1.67 Yes 0 0 No -25 0.94 Yes 45 92.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 59063851 - NM_014453 CHMP2A 1 0.03 0.13 8 -7.92 0 12 4.12 No 75 -6.11 No 0 0 No -21 0.43 No 55 44.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 59065595 - NM_014453 CHMP2A 1 0.3 0.74 40 -0.63 0 12 4.24 No 66 2.04 Yes 0 0 No -26 0.83 Yes 48 64.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 87302544 + NM_001244644 CHMP2B 1 0.32 0.54 25 2.2 0 23 5.73 Yes 32 1.66 Yes 31 0.82 Yes -22 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 86747484 - NM_016079 CHMP3 1 0.06 0.1 7 5.57 75.24 35 7.28 Yes 59 0.48 No 0 0 No -34 0.55 No 27 83.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 86748043 - NM_016079 CHMP3 1 0.08 0.14 8 7.94 84.63 31 4.54 No 18 0.15 No 0 0 No -30 0.78 Yes 40 77.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 86754365 - NM_016079 CHMP3 1 4.44 7.94 72 6.42 87 30 6.51 Yes 17 0.86 Yes 0 0 No -29 0.9 Yes 41 93.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86768488 - NM_016079 CHMP3 1 2.72 3.74 67 8.8 74.54 29 5.08 No 75 -5.23 No 0 0 No -28 0.89 Yes 42 89.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 86774637 - NM_016079 CHMP3 1 0.1 0.13 9 4.44 0 18 5.39 No 5 0.96 Yes 0 0 No -22 0.31 No 48 39.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 86774642 - NM_016079 CHMP3 1 0.21 0.21 12 1.56 75.17 13 4.9 No 0 0.99 Yes 0 0 No -40 0.46 No 44 61.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24679029 - NM_014169 CHMP4A 1 0.13 0.31 17 6.49 79.34 33 8.52 Yes 20 1.97 Yes 0 0 No -32 0.57 No 38 86.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 24680713 - NM_014169 CHMP4A 1 0.59 1.64 56 -0.1 0 16 3.87 No 17 1.35 Yes 0 0 No -29 0.89 Yes 41 89.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24680719 - NM_014169 CHMP4A 1 0.6 1.64 53 -11.46 71.66 24 6.71 Yes 11 1.36 Yes 0 0 No -23 0.87 Yes 47 86.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24680788 - NM_014169 CHMP4A 1 0.3 0.83 37 2.42 0 14 4.47 No 1 0.08 No 0 0 No -43 0.54 No 27 40.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24680816 - NM_014169 CHMP4A 1 0.57 1.61 52 5.47 88.81 16 5.74 Yes 3 0.77 No 0 0 No -30 0.58 No 55 50.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 32441139 + NM_176812 CHMP4B 1 0.05 0.26 15 3.71 81.67 18 4.69 No NA NA NA 0 0 No -38 0.4 No 53 46.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 32441281 + NM_176812 CHMP4B 1 0.03 0.17 11 2.29 66.42 12 4.69 No 32 -2.13 No 25 0.91 Yes -18 0.47 No 52 36.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 32441306 + NM_176812 CHMP4B 1 0.02 0.1 7 -5.89 0 31 5.83 Yes 18 0.64 No 0 0 No -30 0.83 Yes 40 73.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33266959 + NM_016410 CHMP5 1 0.03 0.13 7 9.11 93.71 17 5.39 No 73 0.25 No 0 0 No -22 0.61 No 48 55.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33267177 + NM_016410 CHMP5 1 0.09 0.33 18 -1.82 61.24 34 4.97 No 18 1.11 Yes 0 0 No -30 0.4 No 37 54.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 33268834 + NM_016410 CHMP5 1 0.02 0.11 8 4.95 87.58 30 6.51 Yes -1 1.42 Yes 0 0 No -29 0.75 Yes 41 70.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33273154 + NM_016410 CHMP5 1 0.03 0.14 7 3.92 86.29 22 5.74 Yes 9 1.09 Yes 0 0 No -21 0.83 Yes 49 89.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33278125 + NM_016410 CHMP5 1 0.04 0.17 9 -0.72 67.05 18 4.61 No 19 1.5 Yes 0 0 No -48 0.5 No 22 84.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 33278946 + NM_016410 CHMP5 1 0.05 0.14 9 2.59 0 23 7.07 Yes 10 0.34 No 0 0 No -25 0.88 Yes 45 92.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 78966305 + NM_024591 CHMP6 1 0.2 0.11 7 8.46 86.33 12 5.44 No -1 1 Yes 0 0 No -25 0.66 Yes 45 42.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 23105499 + NM_152272 CHMP7 1 2.14 0.44 19 7.35 87.6 36 5.58 Yes 75 1.8 Yes 31 0.8 Yes -35 0.71 Yes 35 74.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 89935152 - NM_001144073 CHORDC1 1 0.09 0.28 14 6.69 90.41 33 5.96 Yes 20 0.55 No 0 0 No -32 0.87 Yes 38 83.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 89939979 - NM_001144073 CHORDC1 1 2.55 7.71 71 7.25 72.99 29 8.42 Yes 16 0.81 Yes 28 0.77 Yes -28 0.85 Yes 42 92.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 89943760 - NM_001144073 CHORDC1 1 0.18 0.71 30 -1.58 74.52 38 6.37 Yes 25 1.32 Yes 26 0.83 Yes -29 0.49 No 41 61.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 89944482 - NM_001144073 CHORDC1 1 0.14 0.56 25 1.26 0 28 5.44 No 67 -2.77 No 0 0 No -25 0.52 No 45 51.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 89944504 - NM_001144073 CHORDC1 1 0.03 0.14 8 0.97 58.43 36 5.65 Yes -1 0.01 No 28 0.27 Yes -36 0.36 No 56 32.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 89946589 - NM_001144073 CHORDC1 1 0.11 0.46 26 5.6 84.89 20 5.1 No 39 0.96 Yes 23 0.69 Yes -23 0.53 No 47 69.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 41526336 + NM_007236 CHP1 1 0.21 0.4 24 8.86 86.24 24 6.75 Yes 16 1.6 Yes 28 0.91 Yes -28 0.89 Yes 42 94.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41549778 + NM_007236 CHP1 1 0.64 1.31 47 6.08 83.92 38 6.05 Yes 25 1.18 Yes 0 0 No -33 0.57 No 37 66.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41549782 + NM_007236 CHP1 1 0.24 0.53 28 0.09 0 42 6.34 Yes 29 1.17 Yes 0 0 No -37 0.54 No 33 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41556362 + NM_007236 CHP1 1 0.6 1.39 53 3.08 78.27 36 6.32 Yes 23 1.27 Yes 35 0.86 Yes -35 0.89 Yes 35 96.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41564377 + NM_007236 CHP1 1 0.55 1.06 43 5.53 85.02 55 5.37 No 42 0.3 No 27 0.7 Yes -27 0.89 Yes 43 86.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 150933502 + NM_019015 CHPF2 1 0.14 0.11 8 -8.36 0 12 4.24 No 10 1.29 Yes 0 0 No -31 0.86 Yes 35 78.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 150934041 + NM_019015 CHPF2 1 1.3 0.89 38 6.63 86.37 19 4.9 No 6 1.04 Yes 18 0.78 Yes -18 0.59 No 52 75.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 150934610 + NM_019015 CHPF2 1 0.32 0.25 17 8.26 88.27 29 5.29 No 58 0.46 No 0 0 No -28 0.72 Yes 42 69.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 141525226 + NR_040712 CHRAC1 1 0.11 0.19 12 -15.46 0 25 6.89 Yes 12 1.57 Yes 0 0 No -24 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 78882133 + NM_000745 CHRNA5 1 0.35 0.13 7 1.26 0 47 6.47 Yes 65 0.55 No 28 0.58 Yes -23 0.81 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 78882151 + NM_000745 CHRNA5 1 1.7 0.54 29 4.44 0 65 7.3 Yes 43 0.26 No 0 0 No -41 0.48 No 37 54.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 101025123 - NM_004854 CHST10 1 9.64 1.17 47 9.18 82.72 38 6.48 Yes 66 1.17 Yes 37 0.33 Yes -35 0.69 Yes 35 58.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 142840354 + NM_004267 CHST2 1 0.54 0.26 15 9.01 87.91 27 5.41 No 24 1.47 Yes 0 0 No -26 0.7 Yes 44 76.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101728425 - NM_014918 CHSY1 1 5.22 3.43 68 7.76 80.12 41 6.27 Yes 11 1.17 Yes 23 0.9 Yes -23 0.83 Yes 47 87.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 101758274 - NM_014918 CHSY1 1 0.21 0.13 8 7.14 74.91 20 7.97 Yes 7 1.67 Yes 0 0 No -19 0.5 No 36 53.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 101786985 - NM_014918 CHSY1 1 0.49 0.22 11 8.47 92.61 23 4.9 No 10 1.3 Yes 0 0 No -22 0.9 Yes 48 94.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 838927 + NM_022092 CHTF18 1 5.3 2.01 57 5.95 84.13 18 8.72 Yes 5 1.75 Yes 19 0.37 Yes -17 0.65 No 53 93.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 839216 + NM_022092 CHTF18 1 1.1 0.44 25 4.4 0 10 4 No 31 0.21 No 36 0.16 Yes -43 0.83 Yes 27 82.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 840006 + NM_022092 CHTF18 1 6.3 1.88 50 11.83 89.3 27 5.65 Yes 14 1.09 Yes 26 0.9 Yes -26 0.52 No 44 54.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 840330 + NM_022092 CHTF18 1 2.37 0.76 35 4.79 82.97 18 4.9 No 5 1.26 Yes 19 0.29 Yes -17 0.66 No 53 57.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 843154 + NM_022092 CHTF18 1 0.24 0.14 10 3.21 0 20 4.47 No 20 1.56 Yes 0 0 No -32 0.88 Yes 38 94.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 844033 + NM_022092 CHTF18 1 0.34 0.14 9 2.66 62.8 17 7.07 Yes 73 -3.02 No 22 0.83 Yes -16 0.66 Yes 54 64.49 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 844039 + NM_022092 CHTF18 1 0.45 0.24 15 -0.38 0 13 3.87 No 11 -2.45 No 22 0.83 Yes -22 0.83 Yes 48 81.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 844644 + NM_022092 CHTF18 1 0.59 0.19 11 -1.64 61.95 23 4.78 No 22 1.06 Yes 0 0 No -22 0.49 No 48 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 844647 + NM_022092 CHTF18 1 1.38 0.46 23 0.36 79.09 26 5.09 No 25 1.07 Yes 0 0 No -25 0.53 No 45 75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 845247 + NM_022092 CHTF18 1 0.43 0.14 10 1.48 78.45 29 9 Yes 16 0.62 No 0 0 No -28 0.83 Yes 42 66.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 845316 + NM_022092 CHTF18 1 0.31 0.11 8 8.46 89.65 43 7.85 Yes 61 -1.24 No 0 0 No -32 0.57 No 51 65.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 69152429 - NR_033227 CHTF8 1 1.89 4.24 68 7.69 85.59 27 5.48 No 26 0.64 No 0 0 No -38 0.64 No 32 87.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 69154578 - NR_033227 CHTF8 1 0.08 0.15 9 3.49 73.6 30 5.84 Yes 17 0.5 No 27 0.86 Yes -29 0.71 Yes 41 72.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 153614721 + NM_001206612 CHTOP 1 0.07 0.11 8 1.23 80.93 20 8.37 Yes 7 2.18 Yes 25 0.8 Yes -28 0.49 No 42 72.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 153614138 + NM_001206612 CHTOP 1 0.11 0.17 10 8.05 79.74 29 6.48 Yes 16 1.02 Yes 0 0 No -28 0.93 Yes 42 90.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153614721 + NM_001206612 CHTOP 1 67.87 107.33 72 1.23 80.93 20 8.37 Yes 7 2.18 Yes 25 0.8 Yes -28 0.49 No 42 72.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 101948835 - NM_001320928 CHUK 1 0.19 0.17 9 7.1 77.21 31 5.99 Yes 42 0.98 Yes 0 0 No -37 0.33 No 40 36.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 101949266 - NM_001320928 CHUK 1 0.63 0.51 29 3.09 75.24 15 7.21 Yes 71 0.52 No 0 0 No -43 0.58 No 27 81.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 101953786 - NM_001320928 CHUK 1 0.17 0.22 14 7.6 89.25 24 5.92 Yes 59 0.87 Yes 0 0 No -23 0.86 Yes 47 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101953885 - NM_001320928 CHUK 1 0.08 0.1 7 -1.14 0 20 4.75 No 13 1.53 Yes 0 0 No -25 0.84 Yes 45 94.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101958926 - NM_001320928 CHUK 1 0.18 0.21 13 1.84 66.08 32 8.55 Yes 19 1.37 Yes 0 0 No -31 0.89 Yes 39 92.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101964952 - NM_001320928 CHUK 1 0.32 0.36 19 2.38 0 43 7.16 Yes 30 2.42 Yes 0 0 No -42 0.64 No 28 84.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 101964952 - NM_001320928 CHUK 1 0.11 0.13 7 2.38 0 43 7.16 Yes 30 2.42 Yes 0 0 No -42 0.64 No 28 84.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 101967086 - NM_001320928 CHUK 1 0.08 0.1 7 -7 0 25 6.22 Yes 12 1.33 Yes 0 0 No -24 0.93 Yes 46 91.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101977883 - NM_001320928 CHUK 1 0.24 0.43 20 3.05 0 35 5.66 Yes 16 1.01 Yes 0 0 No -28 0.86 Yes 42 82.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101978883 - NM_001320928 CHUK 1 0.06 0.1 7 -0.2 0 11 4 No 15 0.25 No 0 0 No -28 0.8 Yes 42 67.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 65488699 + NM_001202558 CHURC1-FNTB 1 0.72 0.28 15 7.47 81.54 14 6.08 Yes 1 1.74 Yes 26 0.54 Yes -26 0.53 No 40 56.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 65499076 + NM_001202558 CHURC1-FNTB 1 2.24 0.86 36 8.68 78.99 28 7.33 Yes 37 0.92 Yes 0 0 No -27 0.84 Yes 43 73.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 65526111 + NM_001202558 CHURC1-FNTB 1 1.49 0.67 34 10.68 89.91 17 4.91 No 29 -1.53 No 0 0 No -26 0.6 No 44 69.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 96933027 + NM_004804 CIAO1 1 0.42 0.39 20 3.28 70.6 32 6.62 Yes 58 1.39 Yes 31 0.82 Yes -25 0.63 No 39 59.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 96933805 + NM_004804 CIAO1 1 0.13 0.26 13 2.58 75.04 20 5.1 No 50 0.85 Yes 0 0 No -22 0.63 No 48 58.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 96934993 + NM_004804 CIAO1 1 0.35 0.67 36 -16.78 0 14 3.95 No 27 -2.74 No 25 0.84 Yes -14 0.51 No 61 20.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 96935072 + NM_004804 CIAO1 1 0.16 0.32 18 6.32 76.21 47 6.93 Yes 34 1.46 Yes 0 0 No -29 0.45 No 35 52.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 96936855 + NM_004804 CIAO1 1 0.17 0.32 22 -2.34 0 10 4 No 13 1.76 Yes 0 0 No -29 0.63 No 41 71.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 96936955 + NM_004804 CIAO1 1 0.06 0.13 8 8.56 84.87 17 4.5 No 36 -2.11 No 0 0 No -24 0.77 Yes 49 76.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57465383 - NM_001308347 CIAPIN1 1 0.12 0.22 13 5.54 76.73 50 5.28 No 5 1.47 Yes 34 0.54 Yes -34 0.93 Yes 36 94.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57468038 - NM_001308347 CIAPIN1 1 0.12 0.25 14 7.47 85.82 21 5.52 No 8 0.59 No 0 0 No -20 0.73 Yes 50 75.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57473247 - NM_001308347 CIAPIN1 1 845.43 179.99 72 6.36 88.38 23 4.9 No 10 0.96 Yes 22 0.96 Yes -22 0.92 Yes 48 94.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57474872 - NM_001308347 CIAPIN1 1 0.3 0.24 15 2.17 82.39 20 5.74 Yes 63 1.09 Yes 31 0.36 Yes -55 0.39 No 15 89.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 90775021 - NM_001277764 CIB1 1 0.26 0.74 37 10.03 85.14 29 5.66 Yes 16 1.21 Yes 0 0 No -28 0.75 Yes 42 72.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42780819 + NM_001304815 CIC 1 0.26 0.17 10 10.53 86.32 32 7.53 Yes 19 1.84 Yes 0 0 No -26 0.41 No 39 61.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 42782372 + NM_001304815 CIC 1 0.19 0.11 8 8.4 84.97 23 7.28 Yes 10 1.33 Yes 0 0 No -22 0.8 Yes 48 71.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42786928 + NM_001304815 CIC 1 0.54 0.36 20 4.28 75.96 20 3.64 No 39 0.91 Yes 0 0 No -19 0.79 Yes 51 81.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42796720 + NM_001304815 CIC 1 0.33 0.18 9 9.78 91.63 39 7.62 Yes 26 2.4 Yes 35 0.89 Yes -38 0.72 Yes 32 87.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42796720 + NM_001304815 CIC 1 11.13 6.9 72 9.78 91.63 39 7.62 Yes 26 2.4 Yes 35 0.89 Yes -38 0.72 Yes 32 87.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42797085 + NM_001304815 CIC 1 0.94 0.31 18 -5.01 0 14 4.47 No 53 -4.67 No 24 0.93 Yes -17 0.7 Yes 45 28.26 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 42797110 + NM_001304815 CIC 1 41.8 12.49 72 6.06 84.49 28 5.76 Yes 15 0.42 No 24 0.93 Yes -27 0.93 Yes 43 86.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42798089 + NM_001304815 CIC 1 59.02 23.36 72 5.43 79.77 22 5.74 Yes 9 1.46 Yes 18 0.62 Yes -21 0.89 Yes 49 63.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 42798100 + NM_001304815 CIC 1 0.26 0.13 9 -5.2 0 17 4.47 No 20 1.45 Yes 0 0 No -32 0.71 Yes 54 31.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 42798980 + NM_001304815 CIC 1 0.21 0.14 9 3.62 0 39 8.67 Yes 26 1.29 Yes 0 0 No -38 0.57 No 32 89.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 42799028 + NM_001304815 CIC 1 0.31 0.24 14 5.94 83.62 24 5.1 No 74 1.26 Yes 0 0 No -23 0.57 No 47 63.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24777142 - NM_001318807 CIDEB 1 3.22 0.29 15 -1.17 0 21 4.47 No 34 1.36 Yes 19 0.91 Yes -46 0.4 No 28 73.28 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 24777153 - NM_001318807 CIDEB 1 6.78 0.57 26 -4.17 0 10 4 No 23 1.39 Yes 19 0.91 Yes -31 0.76 Yes 39 89.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 10061476 - NR_002786 CIDECP 1 0.84 0.11 8 7.09 80.35 44 7.42 Yes 31 1.66 Yes 0 0 No -43 0.8 Yes 27 92.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 10972203 + NM_001286402 CIITA 1 0.4 0.36 21 10.49 84.43 26 6.08 Yes 13 1.74 Yes 0 0 No -25 0.89 Yes 45 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 10976466 + NM_001286402 CIITA 1 0.31 0.24 12 1.5 78.52 27 6.96 Yes 5 0.02 No 0 0 No -26 0.88 Yes 44 83.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 10989142 + NM_001286402 CIITA 1 1.01 0.82 39 4.94 0 29 5.23 No 12 1.02 Yes 0 0 No -24 0.58 No 42 80.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 10989509 + NM_001286402 CIITA 1 0.39 0.47 23 4.15 81.92 24 5.48 No 62 1.08 Yes 23 0.94 Yes -23 0.34 No 47 57.52 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 10992781 + NM_001286402 CIITA 1 93.93 68.58 72 3.71 77.71 29 5.92 Yes 41 1.22 Yes 25 0.87 Yes -28 0.7 Yes 34 67.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 10993356 + NM_001286402 CIITA 1 0.53 0.6 33 11.36 92 26 6.26 Yes 48 2.11 Yes 0 0 No -25 0.95 Yes 45 94.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 10995379 + NM_001286402 CIITA 1 0.11 0.15 7 1.11 0 13 4.2 No 58 1.2 Yes 21 0.33 Yes -29 0.77 Yes 41 68.06 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 10995654 + NM_001286402 CIITA 1 4.23 3.88 68 5.22 84.45 22 5.1 No 20 1.24 Yes 21 0.95 Yes -21 0.93 Yes 49 94.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 11000387 + NM_001286402 CIITA 1 0.23 0.22 13 6.82 82.88 15 5.2 No 41 1.95 Yes 0 0 No -23 0.49 No 17 46.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 11000844 + NM_001286402 CIITA 1 0.14 0.14 10 6.02 78.06 22 5.9 Yes 9 1.85 Yes 0 0 No -21 0.9 Yes 49 87.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11002802 + NM_001286402 CIITA 1 1.63 0.92 42 -2.3 0 19 2.85 No 65 -4.64 No 22 0.94 Yes -22 0.77 Yes 48 75.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 11002839 + NM_001286402 CIITA 1 6.8 3.97 67 5.4 77.4 23 5 No 10 0.43 No 22 0.94 Yes -22 0.9 Yes 48 77.93 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 11002845 + NM_001286402 CIITA 1 0.31 0.18 13 -1.03 0 9 3.78 No 16 0.44 No 19 0.34 Yes -28 0.85 Yes 42 80.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 11006595 + NM_001286402 CIITA 1 0.19 0.26 14 6.62 80.32 36 4.98 No 23 1.13 Yes 0 0 No -31 0.74 Yes 39 84.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11010405 + NM_001286402 CIITA 1 1.15 1.33 45 7.82 86.91 21 6.86 Yes 23 1.69 Yes 27 0.69 Yes -20 0.63 No 50 58.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 11012671 + NM_001286402 CIITA 1 0.59 0.53 24 10.45 93.56 23 6.78 Yes 10 0.34 No 0 0 No -26 0.66 No 44 70.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 11016270 + NM_001286402 CIITA 1 0.72 0.58 30 -1.27 0 10 4 No 10 0.19 No 0 0 No -28 0.58 No 42 69.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 102823718 - NM_032630 CINP 1 0.12 0.25 15 10.07 88.27 31 5.63 Yes 23 0.74 No 0 0 No -25 0.77 Yes 45 91.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 77566226 + NM_033426 CIPC 1 5.41 1.13 43 9.15 95.96 31 5.23 No 36 0.25 No 22 0.72 Yes -22 0.55 No 48 81.21 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 77572004 + NM_033426 CIPC 1 1.25 0.28 17 -0.43 0 32 6.44 Yes 19 1.29 Yes 0 0 No -31 0.49 No 39 76.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 77579727 + NM_033426 CIPC 1 0.39 0.15 9 8.83 87.68 30 5.37 No 6 1 Yes 29 0.75 Yes -29 0.8 Yes 41 83.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 77579730 + NM_033426 CIPC 1 0.37 0.18 11 4.72 84.02 33 5.62 Yes 9 0.98 Yes 29 0.46 Yes -21 0.86 Yes 49 75.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 77579772 + NM_033426 CIPC 1 0.85 0.33 21 1.6 0 41 6.26 Yes 51 0.96 Yes 0 0 No -37 0.66 No 36 61.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 175223265 - NM_004882 CIR1 1 1.49 1.68 51 9.2 84.27 24 4.51 No 69 -4.14 No 23 0.67 Yes -23 0.8 Yes 47 76.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 175234743 - NM_004882 CIR1 1 0.17 0.17 9 11.72 88.08 30 5.71 Yes 37 1.35 Yes 29 0.79 Yes -29 0.78 Yes 41 59.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 175245443 - NM_004882 CIR1 1 0.12 0.14 9 -13.45 0 28 5.36 No 53 0.77 Yes 18 0.53 Yes -27 0.72 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 175245542 - NM_004882 CIR1 1 0.17 0.15 10 -16.86 0 47 7.67 Yes 34 0.77 Yes 0 0 No -46 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 175255645 - NM_004882 CIR1 1 0.1 0.11 7 0.69 0 17 4.12 No 51 -4.39 No 0 0 No -20 0.63 No 50 57.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 175255653 - NM_004882 CIR1 1 0.19 0.15 8 5.41 80.13 27 5.29 No -4 0.33 No 0 0 No -29 0.72 Yes 41 74.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1270926 + NR_023312 CIRBP 1 2680.97 396.15 72 9.1 82.06 26 5.27 No 23 0.21 No 25 0.8 Yes -25 0.89 Yes 45 80.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 60035877 + NM_018464 CISD1 1 0.83 0.94 43 9.62 88.24 26 6.85 Yes 13 2.37 Yes 25 0.93 Yes -25 0.75 Yes 45 68.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 60036957 + NM_018464 CISD1 1 0.29 0.38 21 1.98 78.81 22 4.8 No 49 0.46 No 0 0 No -21 0.94 Yes 49 96.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 60042658 + NM_018464 CISD1 1 0.32 0.96 39 8.18 83.2 25 5.57 Yes 58 -3.12 No 24 0.38 Yes -24 0.63 No 46 79.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 60042699 + NM_018464 CISD1 1 0.05 0.17 12 1.74 66.23 22 4.64 No 22 0.06 No 0 0 No -21 0.52 No 49 40.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 36888013 + NM_001136498 CISD3 1 0.15 0.11 7 13.63 94.01 28 6.24 Yes 15 1.77 Yes 0 0 No -27 0.97 Yes 43 95.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120128257 - NM_001206999 CIT 1 67.6 9.64 72 5.77 76.9 25 6.24 Yes 76 -2.14 No 29 0.51 Yes -27 0.66 No 46 73.74 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 120128287 - NM_001206999 CIT 1 1.6 0.19 11 6.01 81.84 38 6.4 Yes 69 -3.14 No 29 0.51 Yes -35 0.48 No 35 45.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 120150493 - NM_001206999 CIT 1 0.66 0.17 12 -4.29 0 11 3.89 No NA NA NA 0 0 No -55 0.15 No 15 48.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 120156610 - NM_001206999 CIT 1 5.45 0.74 33 2.04 0 19 4.58 No 40 -2.09 No 0 0 No -22 0.69 Yes 48 79.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 120156622 - NM_001206999 CIT 1 100.64 13.83 72 8.78 89.74 11 5.48 No 28 -2.1 No 27 0.5 Yes -20 0.44 No 50 41.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 120172212 - NM_001206999 CIT 1 0.46 0.17 8 -1.07 0 18 3.95 No 10 0.33 No 22 0.89 Yes -22 0.44 No 19 57.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 120195346 - NM_001206999 CIT 1 1.84 0.71 37 -3.88 0 49 7.18 Yes 36 0.9 Yes 0 0 No -48 0.9 Yes 22 94.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120219859 - NM_001206999 CIT 1 1.14 0.22 14 3.29 80.41 25 4.87 No 12 0.17 No 0 0 No -29 0.32 No 45 34.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 120237324 - NM_001206999 CIT 1 1.48 0.47 25 -1 70.98 46 6.73 Yes 33 0.27 No 0 0 No -41 0.85 Yes 29 93.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 120274087 - NM_001206999 CIT 1 1.47 0.35 21 12.22 88.27 34 7.26 Yes 40 1.21 Yes 0 0 No -36 0.81 Yes 34 94.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120303665 - NM_001206999 CIT 1 1.03 0.38 19 -1.95 81.99 34 6.85 Yes 21 1.3 Yes 0 0 No -33 0.51 No 37 65.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 120310254 - NM_001206999 CIT 1 0.21 0.11 8 8.55 80.91 30 5.96 Yes 72 0.57 No 0 0 No -26 0.5 No 44 75.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 120312162 - NM_001206999 CIT 1 1.48 0.67 37 7.78 76.41 27 5.74 Yes 14 1.2 Yes 0 0 No -26 0.85 Yes 44 84.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120313980 - NM_001206999 CIT 1 0.52 0.13 9 -1.33 0 9 3.87 No 6 1.23 Yes 0 0 No -27 0.75 Yes 43 78.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130931980 - NM_001131015 CIZ1 1 0.56 0.9 45 6.5 82.65 22 7.1 Yes 69 -0.25 No 21 0.51 Yes -21 0.42 No 49 78.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 130932051 - NM_001131015 CIZ1 1 0.17 0.29 19 2.26 75.14 20 4.9 No 31 1.43 Yes 0 0 No -19 0.94 Yes 51 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130940061 - NM_001131015 CIZ1 1 0.18 0.36 17 -6.89 0 25 4.68 No 69 -6.21 No 26 0.67 Yes -12 0.75 Yes 58 29.73 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 130941172 - NM_001131015 CIZ1 1 0.63 0.22 13 0.11 0 17 4.58 No 64 -4.17 No 0 0 No -20 0.45 No 40 29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 130941268 - NM_001131015 CIZ1 1 0.73 0.19 9 -6.98 0 10 3.87 No 52 -3.44 No 0 0 No -18 0.64 No 52 33.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 130941690 - NM_001131015 CIZ1 1 0.08 0.14 10 1.1 0 34 6.75 Yes 4 0.73 No 0 0 No -33 0.7 Yes 42 65.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 130943079 - NM_001131015 CIZ1 1 12.66 11.57 72 3.42 89.97 12 4.9 No 14 0.27 No 24 0.68 Yes -26 0.68 Yes 44 47.08 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 130952678 - NM_001131015 CIZ1 1 0.4 0.36 19 6.26 89.5 26 5.2 No 55 1.96 Yes 31 0.91 Yes -23 0.82 Yes 50 76.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 130952705 - NM_001131015 CIZ1 1 0.35 0.32 18 -0.77 76.55 28 5.29 No 28 1.97 Yes 0 0 No -40 0.53 No 43 29.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 130952708 - NM_001131015 CIZ1 1 0.65 0.61 35 5.52 79.38 25 5 No 25 1.96 Yes 0 0 No -37 0.6 No 46 56.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 130952881 - NM_001131015 CIZ1 1 0.2 0.17 11 7.05 85.59 21 5.76 Yes 71 0.73 No 0 0 No -23 0.61 No 42 59.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 53030926 + NM_001286686 CKAP2 1 0.15 0.18 8 7.23 88.37 62 8.86 Yes 49 0.76 No 0 0 No -23 0.65 No 47 65.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 53031053 + NM_001286686 CKAP2 1 0.17 0.21 14 3.01 0 22 6.57 Yes 9 0.78 Yes 0 0 No -33 0.66 No 37 71.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 53035030 + NM_001286686 CKAP2 1 32.92 38.68 72 5.44 81.37 30 4.58 No 68 1.35 Yes 25 0.84 Yes -25 0.76 Yes 45 68.5 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 53038885 + NM_001286686 CKAP2 1 0.09 0.15 9 3.97 66.93 35 5.86 Yes 22 2.1 Yes 0 0 No -34 0.7 Yes 36 80.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 53042322 + NM_001286686 CKAP2 1 0.18 0.4 21 3.18 73.77 27 4.83 No 50 -2.34 No 0 0 No -26 0.57 No 43 57.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 46765746 - NM_001008938 CKAP5 1 0.14 0.29 18 7.78 82.34 34 4.78 No 37 1.56 Yes 0 0 No -19 0.47 No 42 63.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 46765773 - NM_001008938 CKAP5 1 0.07 0.17 10 5.96 72.39 37 6.46 Yes 10 1.56 Yes 0 0 No -32 0.61 No 38 59.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 46765812 - NM_001008938 CKAP5 1 0.11 0.22 12 -1.64 0 37 6.16 Yes 24 1.42 Yes 0 0 No -31 0.76 Yes 34 64.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 46765841 - NM_001008938 CKAP5 1 0.08 0.15 8 4.64 67.02 22 6.02 Yes 0 0.41 No 27 0.82 Yes -21 0.78 Yes 49 69.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46771906 - NM_001008938 CKAP5 1 0.18 0.39 20 4.69 74.68 33 6.79 Yes 52 -4.81 No 0 0 No -32 0.53 No 38 92.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 46772827 - NM_001008938 CKAP5 1 0.07 0.18 11 -7.63 0 19 3.72 No 70 -6.19 No 22 0.42 Yes -18 0.31 No 54 18.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 46776534 - NM_001008938 CKAP5 1 0.26 0.5 31 1.68 83.77 19 4.8 No 6 1.06 Yes 0 0 No -18 0.89 Yes 52 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46782360 - NM_001008938 CKAP5 1 0.07 0.13 8 4.3 0 31 5.63 Yes 47 1.14 Yes 27 0.58 Yes -30 0.45 No 45 26.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 46784676 - NM_001008938 CKAP5 1 0.44 0.85 38 3.88 77.73 28 6.16 Yes 50 -4.09 No 0 0 No -27 0.87 Yes 43 77.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 46792481 - NM_001008938 CKAP5 1 0.07 0.11 7 10.06 85.22 34 6.32 Yes 64 1.03 Yes 0 0 No -26 0.5 No 37 60.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 46792552 - NM_001008938 CKAP5 1 0.1 0.17 12 -1.12 0 15 3.12 No 16 0.79 Yes 24 0.9 Yes -19 0.82 Yes 42 53.3 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 46799742 - NM_001008938 CKAP5 1 0.2 0.31 19 4.4 64.89 28 5.44 No 55 -5.72 No 0 0 No -30 0.8 Yes 40 63.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 46801892 - NM_001008938 CKAP5 1 0.13 0.29 14 3.28 62.76 36 5.21 No 71 -1.37 No 28 0.81 Yes -28 0.35 No 42 66.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 46806182 - NM_001008938 CKAP5 1 1.68 2.86 66 1.83 83.83 24 5.1 No 42 1.44 Yes 0 0 No -23 0.94 Yes 47 95.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46806249 - NM_001008938 CKAP5 1 0.08 0.14 9 6.3 72.87 31 3.46 No 55 1.61 Yes 26 0.84 Yes -26 0.39 No 44 45.03 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 46809237 - NM_001008938 CKAP5 1 0.08 0.14 7 12.13 86.88 37 6.23 Yes -4 0.72 No 0 0 No -26 0.4 No 44 51.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 46842800 - NM_001008938 CKAP5 1 7.2 7.15 71 4.7 80.89 26 5.39 No 13 1.28 Yes 38 0.34 Yes -25 0.87 Yes 45 91.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46856956 - NM_001008938 CKAP5 1 0.52 0.53 27 9.11 73.54 30 6.48 Yes 17 1.35 Yes 0 0 No -29 0.96 Yes 41 96.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154951181 + NM_001826 CKS1B 1 0.17 0.76 32 4.19 0 15 4.58 No 2 0.6 No 21 0.75 Yes -14 0.36 No 43 73.71 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 122123555 - NM_001207051 CLASP1 1 0.37 0.44 21 7.41 76.77 43 5.46 No 21 1.5 Yes 0 0 No -33 0.74 Yes 37 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 122176306 - NM_001207051 CLASP1 1 0.36 0.28 13 3.43 62.11 43 7.63 Yes 59 1.65 Yes 23 0.74 Yes -46 0.46 No 24 74.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 122179418 - NM_001207051 CLASP1 1 0.4 0.31 16 7.31 82.85 20 3.81 No 25 0.61 No 0 0 No -29 0.37 No 41 52.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 122185007 - NM_001207051 CLASP1 1 1.26 1.26 48 3.75 75.33 71 10.12 Yes 58 2.33 Yes 42 0.53 Yes -42 0.84 Yes 28 87.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 122215332 - NM_001207051 CLASP1 1 0.08 0.11 8 -24.75 0 30 6.56 Yes 17 2.01 Yes 0 0 No -29 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 122228851 - NM_001207051 CLASP1 1 0.91 1.03 40 4.56 0 27 5.63 Yes 29 0.63 No 0 0 No -27 0.71 Yes 43 71.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 122233450 - NM_001207051 CLASP1 1 0.28 0.33 16 9.22 89.17 25 5.48 No 12 0.72 No 0 0 No -24 0.91 Yes 46 84.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 122251566 - NM_001207051 CLASP1 1 0.25 0.29 17 8.25 81.95 22 6.31 Yes 9 0.78 Yes 0 0 No -21 0.71 Yes 49 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 122284778 - NM_001207051 CLASP1 1 0.06 0.11 7 1.69 71.89 31 5.57 Yes 18 0.8 Yes 0 0 No -30 0.89 Yes 40 91.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 122385325 - NM_001207051 CLASP1 1 0.39 0.35 18 6.56 83.26 22 4.79 No 17 1.34 Yes 0 0 No -21 0.86 Yes 49 93.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 33580387 - NM_015097 CLASP2 1 0.19 0.17 9 -2.98 0 14 4.36 No 1 0.51 No 0 0 No -20 0.42 No 36 35.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 33580452 - NM_015097 CLASP2 1 0.12 0.11 8 -4.93 0 13 4.36 No 66 1.59 Yes 25 0.54 Yes -17 0.59 No 58 32.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 33586840 - NM_015097 CLASP2 1 0.22 0.17 12 2.81 72.14 32 5.29 No 40 0.09 No 0 0 No -31 0.42 No 38 59.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 33600668 - NM_015097 CLASP2 1 1.34 0.69 37 7.52 81.87 33 4.99 No 53 0.87 Yes 32 0.68 Yes -32 0.63 No 42 80.51 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 33646197 - NM_015097 CLASP2 1 0.19 0.21 10 7.82 83.47 30 5.48 No 49 1.25 Yes 0 0 No -29 0.91 Yes 41 93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 33659739 - NM_015097 CLASP2 1 0.19 0.15 11 5.76 87.35 30 5 No 50 0.9 Yes 0 0 No -22 0.67 Yes 51 75.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 33673864 - NM_015097 CLASP2 1 434.71 50.69 72 5.8 90.77 20 5.12 No 7 0.49 No 25 0.75 Yes -28 0.72 Yes 42 61.92 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 33681300 - NM_015097 CLASP2 1 1.22 0.15 9 3.76 73.85 47 6.87 Yes 57 -2.5 No 0 0 No -30 0.49 No 36 48.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 33681303 - NM_015097 CLASP2 1 2.6 0.32 16 5.87 74.03 44 6.69 Yes 54 -2.51 No 0 0 No -27 0.52 No 39 47.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 33681636 - NM_015097 CLASP2 1 8.21 1 41 9.32 92.73 31 5.36 No 18 0.58 No 0 0 No -30 0.64 No 40 46.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 33689522 - NM_015097 CLASP2 1 0.96 0.75 37 10.35 95.65 20 8.25 Yes 7 1.24 Yes 0 0 No -19 0.76 Yes 51 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 33725093 - NM_015097 CLASP2 1 1.09 0.85 34 2.59 0 34 6.03 Yes 21 0.38 No 0 0 No -33 0.68 Yes 37 58.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 33725097 - NM_015097 CLASP2 1 0.54 0.42 28 1.09 83.14 30 5.81 Yes 17 0.4 No 29 0.66 Yes -29 0.73 Yes 41 54 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 33741891 - NM_015097 CLASP2 1 0.68 0.32 18 7.26 84.11 26 5.29 No 36 0.04 No 0 0 No -25 0.78 Yes 45 59.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 33741910 - NM_015097 CLASP2 1 0.32 0.17 8 1.79 0 30 5.81 Yes 17 0.03 No 0 0 No -30 0.71 Yes 40 77.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 33742693 - NM_015097 CLASP2 1 0.37 0.21 12 8.88 85.91 30 5.39 No 56 1.5 Yes 0 0 No -29 0.73 Yes 41 84.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 45546863 + NR_103529 CLASRP 1 0.18 0.13 7 7.12 91.57 24 4.37 No 11 0.76 No 0 0 No -23 0.67 Yes 47 73.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 45556336 + NR_103529 CLASRP 1 0.46 0.28 17 8.97 82.75 68 5.67 Yes 61 0.86 Yes 22 0.86 Yes -22 0.59 No 48 55.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 45573201 + NR_103529 CLASRP 1 0.77 0.47 25 4.55 76.14 20 6.78 Yes 63 0.92 Yes 19 0.58 Yes -19 0.64 No 51 59.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 109472827 - NM_001048210 CLCC1 1 5.62 2.76 61 5.37 72.59 40 5.53 No 27 1.16 Yes 24 0.87 Yes -28 0.57 No 42 69.09 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 109472827 - NM_001048210 CLCC1 1 0.3 0.15 9 5.37 72.59 40 5.53 No 27 1.16 Yes 24 0.87 Yes -28 0.57 No 42 69.09 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 109479024 - NM_001048210 CLCC1 1 0.73 0.49 22 3.7 69.76 22 5.91 Yes 15 -2.32 No 0 0 No -32 0.6 No 38 54.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 109480839 - NM_001048210 CLCC1 1 0.7 0.64 30 7.49 94.39 18 4.67 No 63 1.21 Yes 0 0 No -17 0.73 Yes 53 75.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109480931 - NM_001048210 CLCC1 1 0.43 0.39 25 9.63 85.88 33 6.77 Yes 20 0.98 Yes 0 0 No -32 0.96 Yes 38 97.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109484117 - NM_001048210 CLCC1 1 0.42 0.42 24 -2.77 0 40 7.13 Yes 27 1.39 Yes 0 0 No -39 0.84 Yes 31 90.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109484174 - NM_001048210 CLCC1 1 0.16 0.15 10 2.78 80.95 21 4.59 No 8 0.06 No 0 0 No -24 0.72 Yes 46 77.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 109484231 - NM_001048210 CLCC1 1 0.31 0.33 19 2.81 67.36 40 4.24 No 21 0.64 No 0 0 No -39 0.38 No 31 42.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 109486530 - NM_001048210 CLCC1 1 4.23 3.68 68 5.53 69.99 21 4.4 No 12 0.95 Yes 24 0.8 Yes -24 0.7 Yes 46 74.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 109489779 - NM_001048210 CLCC1 1 0.14 0.13 8 2.84 0 36 6.31 Yes 13 0.59 No 0 0 No -38 0.45 No 32 77.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 109490131 - NM_001048210 CLCC1 1 1.99 1.71 56 5.92 84.09 26 4.75 No 2 0.86 Yes 0 0 No -20 0.69 Yes 50 78.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 170608816 + NM_001243374 CLCN3 1 0.14 0.1 7 -1.66 0 16 4.12 No 13 0.26 No 0 0 No -15 0.64 No 42 73.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 170638942 + NM_001243374 CLCN3 1 19.33 11.72 72 6.95 84.46 15 4.98 No 63 1.07 Yes 23 0.74 Yes -20 0.5 No 50 61.7 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 11866877 + NM_001256959 CLCN6 1 0.87 0.11 7 7.68 90.91 22 5 No 69 1.71 Yes 0 0 No -21 0.95 Yes 49 92.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11877420 + NM_001256959 CLCN6 1 0.57 0.17 10 5.21 89.01 12 4.64 No 61 0.24 No 0 0 No -26 0.44 No 44 68.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 11878029 + NM_001256959 CLCN6 1 2.76 0.74 32 7.26 85.83 26 8.5 Yes 13 0.6 No 0 0 No -25 0.88 Yes 45 87.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 11880418 + NM_001256959 CLCN6 1 7.31 1.49 48 -1.23 56.42 28 6.16 Yes 62 -3.21 No 27 0.73 Yes -27 0.74 Yes 43 66.42 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 11882808 + NM_001256959 CLCN6 1 0.77 0.14 7 0.51 0 40 6.44 Yes 60 1.56 Yes 0 0 No -29 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 11887171 + NM_001256959 CLCN6 1 12.57 1.64 58 1.72 89.55 22 4.9 No 37 1.46 Yes 28 0.77 Yes -22 0.24 No 21 65.7 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 11893232 + NM_001256959 CLCN6 1 1.03 0.11 7 8.52 84.09 32 5.11 No 9 1.93 Yes 0 0 No -21 0.74 Yes 49 86.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11893661 + NM_001256959 CLCN6 1 1.75 0.24 15 10.09 89.86 30 8.29 Yes 17 0.75 No 0 0 No -29 0.72 Yes 43 74.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 11897433 + NM_001256959 CLCN6 1 32.55 3.51 67 3.36 73.09 39 6.56 Yes 26 0.87 Yes 0 0 No -38 0.44 No 32 87.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 1497799 - NM_001114331 CLCN7 1 0.32 0.22 11 0.17 75.14 31 5.49 No 44 -1.07 No 0 0 No -30 0.35 No 48 14.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1498571 - NM_001114331 CLCN7 1 0.2 0.11 7 8.5 87.21 26 5.29 No NA NA NA 0 0 No -21 0.72 Yes 49 76.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 1501705 - NM_001114331 CLCN7 1 0.38 0.17 11 6.29 88.53 23 4.47 No 40 0.96 Yes 0 0 No -22 0.37 No 18 65.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 1501848 - NM_001114331 CLCN7 1 0.38 0.14 10 3.29 73.72 65 10.03 Yes 0 1.31 Yes 0 0 No -24 0.9 Yes 46 91.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100877713 - NM_014343 CLDN15 1 3.3 0.21 12 -0.84 0 20 4.46 No 19 1.02 Yes 0 0 No -31 0.77 Yes 39 81.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100880168 - NM_014343 CLDN15 1 22.81 1.83 57 1.54 84.52 13 4.98 No 71 0.16 No 20 0.93 Yes -20 0.93 Yes 50 90.27 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 98234677 - NM_001040200 CLDND1 1 1.07 4.29 65 7.03 92.33 32 5.99 Yes 10 1.03 Yes 22 0.91 Yes -22 0.84 Yes 48 83.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 98235587 - NM_001040200 CLDND1 1 0.29 1.18 50 10.48 84.43 48 8.23 Yes 35 0.19 No 0 0 No -28 0.74 Yes 50 47.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 98235760 - NM_001040200 CLDND1 1 0.07 0.28 18 6.36 83.37 29 5.55 No 37 1.37 Yes 42 0.42 Yes -28 0.82 Yes 42 69.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 98235992 - NM_001040200 CLDND1 1 0.23 0.6 31 4.8 0 18 5.81 Yes 60 1.93 Yes 0 0 No -27 0.41 No 43 70.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 11095539 + NM_015226 CLEC16A 1 0.31 0.38 20 3.13 86.51 26 5.19 No 2 0.98 Yes 0 0 No -25 0.83 Yes 45 91.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11103143 + NM_015226 CLEC16A 1 0.4 0.15 10 11.95 91.22 47 6.78 Yes 34 0.02 No 0 0 No -36 0.49 No 34 69.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 11106775 + NM_015226 CLEC16A 1 1.29 0.49 25 4.3 80.15 45 10.83 Yes 32 0.6 No 0 0 No -28 0.87 Yes 42 85.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 11127736 + NM_015226 CLEC16A 1 0.69 0.63 29 6.68 79.43 28 6.1 Yes 60 -1.84 No 0 0 No -30 0.5 No 40 56.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 11129903 + NM_015226 CLEC16A 1 0.48 0.43 21 10.11 90.94 23 7.42 Yes 10 1 Yes 0 0 No -22 0.84 Yes 48 89.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11145430 + NM_015226 CLEC16A 1 0.19 0.22 14 8.9 82.02 32 6.61 Yes 62 1.26 Yes 0 0 No -34 0.81 Yes 36 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11146279 + NM_015226 CLEC16A 1 0.26 0.11 7 6.13 80.9 36 6.15 Yes 23 0.73 No 0 0 No -35 0.82 Yes 35 91.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 11146496 + NM_015226 CLEC16A 1 10.26 4.17 68 8.65 87.63 30 7.81 Yes 17 2.6 Yes 0 0 No -29 0.94 Yes 41 95.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11219858 + NM_015226 CLEC16A 1 0.53 0.35 18 4.49 76.48 31 5.66 Yes 67 1.65 Yes 22 0.23 Yes -30 0.92 Yes 40 88.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 11220522 + NM_015226 CLEC16A 1 0.42 0.18 11 6.87 77.46 30 6.77 Yes 17 2.45 Yes 0 0 No -29 0.75 Yes 41 80.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11229925 + NM_015226 CLEC16A 1 0.56 0.24 16 5.46 89.77 23 7.47 Yes 54 0.47 No 0 0 No -22 0.89 Yes 48 90.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 11229928 + NM_015226 CLEC16A 1 0.62 0.28 14 4.88 88.84 26 7.65 Yes 57 0.47 No 0 0 No -25 0.92 Yes 45 91.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 11243742 + NM_015226 CLEC16A 1 0.42 0.17 11 9.27 94.82 29 5.12 No 20 1.23 Yes 32 0.75 Yes -25 0.64 No 45 68.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 11268010 + NM_015226 CLEC16A 1 2.18 0.51 28 9.36 83.3 26 6.59 Yes 64 1.06 Yes 28 0.44 Yes -25 0.62 No 32 48.75 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 11272753 + NM_015226 CLEC16A 1 0.71 0.17 11 8.17 91.36 36 7.59 Yes 76 0.93 Yes 0 0 No -23 0.85 Yes 47 89.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14707915 + NR_109784 CLEC17A 1 2.14 3.17 64 0.56 0 27 6.77 Yes 14 0.17 No 0 0 No -26 0.9 Yes 44 91.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 14713126 + NR_109784 CLEC17A 1 0.3 0.53 24 0.72 0 57 6.12 Yes 52 0.77 Yes 0 0 No -30 0.37 No 40 74.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 10009841 - NM_005127 CLEC2B 1 0.54 0.19 11 5.21 83.01 24 5.92 Yes 57 1.13 Yes 0 0 No -24 0.6 No 46 60.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 9823616 + NR_036693 CLEC2D 1 0.14 0.82 31 9.06 83.86 39 6.63 Yes 2 2.01 Yes 0 0 No -38 0.7 Yes 32 78.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 9825213 + NR_036693 CLEC2D 1 0.02 0.13 8 8.14 78.68 28 5.76 Yes 58 0.76 No 0 0 No -27 0.5 No 43 43.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 9832639 + NR_036693 CLEC2D 1 0.09 0.53 25 4.66 71.81 26 6.03 Yes 34 0.61 No 0 0 No -25 0.78 Yes 45 93.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 9832785 + NR_036693 CLEC2D 1 1.92 11.69 72 4.57 79.44 24 3.28 No 22 1.15 Yes 26 0.82 Yes -24 0.66 Yes 46 61.39 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 9833602 + NR_036693 CLEC2D 1 0.08 0.5 25 5.22 66.26 44 7.54 Yes -2 0.58 No 0 0 No -32 0.52 No 38 83.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 9834502 + NR_036693 CLEC2D 1 0.19 1.47 50 6.96 95.65 16 5.47 No 3 0.48 No 0 0 No -29 0.61 No 41 53.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 9834712 + NR_036693 CLEC2D 1 0.02 0.15 8 11.81 89.85 54 8.02 Yes 32 1.31 Yes 0 0 No -31 0.43 No 42 55.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 9882273 - NM_172004 CLECL1 1 5.99 21.07 72 5.69 77.61 21 4.61 No 43 0.77 Yes 0 0 No -24 0.69 Yes 46 89.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 9882872 - NM_172004 CLECL1 1 0.4 1.36 46 -4.56 79.38 44 6.92 Yes 50 0.38 No 0 0 No -36 0.59 No 34 57.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 154508216 - NM_001289 CLIC2 1 0.32 0.19 12 4.28 0 35 6.92 Yes 45 1.11 Yes 0 0 No -34 0.71 Yes 36 70.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 154508220 - NM_001289 CLIC2 1 1.03 0.33 17 2.74 83.57 31 6.63 Yes 41 1.12 Yes 30 0.68 Yes -30 0.68 Yes 40 70.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 25107816 + NM_013943 CLIC4 1 0.07 0.11 8 7.4 85.86 27 7.49 Yes 72 0.21 No 0 0 No -25 0.41 No 43 58.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 25119667 + NM_013943 CLIC4 1 0.57 1.17 46 9.99 93.23 26 7.18 Yes 13 0.87 Yes 25 0.65 Yes -25 0.47 No 45 69.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 25124637 + NM_013943 CLIC4 1 0.29 0.85 35 7.96 91.29 16 5.43 No 3 1.39 Yes 0 0 No -28 0.68 Yes 42 64.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 25140588 + NM_013943 CLIC4 1 0.04 0.11 8 -7.92 0 31 4.59 No 12 0.92 Yes 0 0 No -24 0.59 No 46 48.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 157215027 - NM_001195556 CLINT1 1 1.09 2.43 61 -0.2 70.28 45 6.55 Yes 7 0.16 No 28 0.58 Yes -28 0.39 No 42 51.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 157216460 - NM_001195556 CLINT1 1 0.75 0.56 30 4.82 75.58 36 4.87 No 67 1.49 Yes 0 0 No -32 0.52 No 35 73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 157216522 - NM_001195556 CLINT1 1 132.46 109.49 72 7.13 80.97 18 5.48 No 5 1.52 Yes 26 0.83 Yes -26 0.76 Yes 44 80.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 157217660 - NM_001195556 CLINT1 1 0.93 0.69 31 7.53 76.49 22 6.98 Yes 9 1.17 Yes 21 0.84 Yes -21 0.65 No 49 77.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 157218998 - NM_001195556 CLINT1 1 1.1 2.1 61 0.25 0 9 3.87 No 75 1.19 Yes 0 0 No -31 0.62 No 39 75.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 157233115 - NM_001195556 CLINT1 1 0.06 0.1 7 -0.05 0 9 3.87 No 35 1.07 Yes 0 0 No -37 0.85 Yes 33 90.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 157236738 - NM_001195556 CLINT1 1 0.11 0.17 12 4.67 87.86 20 4.9 No 61 -3.38 No 0 0 No -20 0.34 No 47 39.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 157236844 - NM_001195556 CLINT1 1 0.17 0.36 19 1.53 73.34 17 5.87 Yes 55 0.22 No 32 0.44 Yes -24 0.52 No 46 72.32 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 157240168 - NM_001195556 CLINT1 1 0.06 0.14 8 2.07 82.93 25 5.21 No 69 0.99 Yes 0 0 No -24 0.76 Yes 46 79.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 157240198 - NM_001195556 CLINT1 1 0.16 0.35 19 -0.01 73.51 27 4.62 No 39 0.99 Yes 0 0 No -23 0.74 Yes 47 59.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 157240265 - NM_001195556 CLINT1 1 0.07 0.15 9 0.75 0 14 4.45 No 48 0.71 No 31 0.85 Yes -19 0.69 Yes 51 68.95 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 122758691 - NM_001247997 CLIP1 1 0.31 0.17 11 3 81.52 29 5.28 No 39 0.47 No 28 0.66 Yes -28 0.76 Yes 42 51.21 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 122762445 - NM_001247997 CLIP1 1 0.3 0.18 13 12.38 93.32 31 6.27 Yes 15 0.94 Yes 0 0 No -27 0.77 Yes 43 77.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122763691 - NM_001247997 CLIP1 1 0.18 0.15 8 1.64 79.71 52 6.53 Yes 39 2.14 Yes 0 0 No -27 0.49 No 35 60.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 122808929 - NM_001247997 CLIP1 1 0.2 0.21 11 7.69 84.46 44 8.72 Yes 31 1.03 Yes 0 0 No -38 0.86 Yes 32 90.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122830078 - NM_001247997 CLIP1 1 0.83 0.13 7 5.85 84.22 51 6.5 Yes 12 1.03 Yes 0 0 No -24 0.71 Yes 46 73.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122862502 - NM_001247997 CLIP1 1 0.16 0.14 10 4.49 0 9 3.87 No 9 0.66 No 0 0 No -24 0.49 No 46 77.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 73709909 + NM_032421 CLIP2 1 0.17 0.18 10 7.06 81.5 30 7.78 Yes 47 0.82 Yes 0 0 No -29 0.92 Yes 41 89.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73711305 + NM_032421 CLIP2 1 0.47 0.35 21 8.94 92.05 25 5.1 No 12 0.83 Yes 0 0 No -24 0.88 Yes 46 85.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73726758 + NM_032421 CLIP2 1 0.25 0.29 15 5.65 74.77 44 5.43 No 25 0.81 Yes 0 0 No -37 0.93 Yes 33 93.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73734710 + NM_032421 CLIP2 1 0.28 0.32 17 -0.19 43.59 25 6.26 Yes 12 1.06 Yes 0 0 No -24 0.53 No 46 82.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 73737245 + NM_032421 CLIP2 1 0.28 0.35 20 5.45 80.12 20 5.57 Yes 7 0.99 Yes 0 0 No -19 0.58 No 51 81.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 73743923 + NM_032421 CLIP2 1 1.28 1.68 53 7.24 73.99 46 7.47 Yes 57 0.66 No 0 0 No -45 0.67 Yes 25 80.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 73744606 + NM_032421 CLIP2 1 0.13 0.14 9 5.14 83.04 53 7.68 Yes 53 0.22 No 0 0 No -47 0.63 No 18 79.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 73744944 + NM_032421 CLIP2 1 0.13 0.13 8 12.03 85.97 44 6.63 Yes 31 1.27 Yes 0 0 No -39 0.78 Yes 31 87.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73768067 + NM_032421 CLIP2 1 2.41 2.51 64 8.83 76.54 28 6.78 Yes 15 1.58 Yes 0 0 No -27 0.92 Yes 43 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73771564 + NM_032421 CLIP2 1 0.18 0.31 19 0.95 0 15 4.58 No 17 -1.88 No 0 0 No -22 0.54 No 48 78.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 73775872 + NM_032421 CLIP2 1 1.07 0.58 27 3.16 0 21 6.08 Yes 75 0.82 Yes 0 0 No -30 0.76 Yes 40 77.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73776046 + NM_032421 CLIP2 1 0.73 0.39 20 4.8 85.11 34 6.7 Yes 21 1.2 Yes 0 0 No -33 0.92 Yes 37 94.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73777880 + NM_032421 CLIP2 1 0.32 0.18 11 14.07 89.91 34 6.44 Yes 74 2.24 Yes 0 0 No -33 0.73 Yes 37 72.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73787261 + NM_032421 CLIP2 1 23.04 26.24 72 0.66 66.25 116 11.18 Yes NA NA NA 25 0.53 Yes -25 0.19 No 45 37.1 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 73791790 + NM_032421 CLIP2 1 0.94 1.43 49 10.66 88.24 25 4.64 No 12 0.69 No 0 0 No -25 0.56 No 45 69.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 73791941 + NM_032421 CLIP2 1 0.16 0.25 15 6.9 72.73 27 6.49 Yes 14 1.29 Yes 0 0 No -26 0.86 Yes 44 82.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73795120 + NM_032421 CLIP2 1 0.1 0.15 8 5.58 89.21 17 4.8 No 4 0.26 No 19 0.91 Yes -16 0.48 No 54 66.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 73795911 + NM_032421 CLIP2 1 0.18 0.25 15 8.08 81.32 36 7.74 Yes 23 2.25 Yes 28 0.95 Yes -35 0.67 Yes 35 87.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 73811406 + NM_032421 CLIP2 1 0.12 0.13 7 -11.2 66.97 37 6.16 Yes -1 0.79 Yes 0 0 No -36 0.72 Yes 39 63.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 73811708 + NM_032421 CLIP2 1 0.1 0.13 8 5.3 77.48 26 4.7 No 64 -5.15 No 0 0 No -25 0.95 Yes 45 96.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 73816108 + NM_032421 CLIP2 1 0.48 0.64 29 3.73 68.37 30 5.55 No 32 1.78 Yes 0 0 No -29 0.68 Yes 26 64.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 29355604 + NM_001287528 CLIP4 1 0.47 0.21 12 8.14 77.76 37 10.98 Yes 11 0.93 Yes 0 0 No -37 0.51 No 33 70.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 29356506 + NM_001287528 CLIP4 1 0.18 0.1 7 -7.68 0 17 4.12 No 17 -2.53 No 20 0.85 Yes -16 0.76 Yes 54 38.78 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 29361954 + NM_001287528 CLIP4 1 0.32 0.19 11 7.64 85.54 35 6.24 Yes 22 0.88 Yes 0 0 No -34 0.81 Yes 36 89.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 201718685 - NR_027855 CLK1 1 0.08 0.19 11 1.39 59.11 41 6.2 Yes 32 1.21 Yes 0 0 No -34 0.31 No 30 37.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 201719441 - NR_027855 CLK1 1 0.15 0.33 19 2.22 73.71 34 6.85 Yes 21 1.26 Yes 25 0.67 Yes -33 0.69 Yes 37 80.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 201719804 - NR_027855 CLK1 1 0.3 0.65 29 1.46 0 15 3.84 No 58 1.72 Yes 0 0 No -43 0.8 Yes 43 62.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 201724939 - NR_027855 CLK1 1 161.31 73.54 72 6.57 84.24 85 9.09 Yes 72 1.26 Yes 30 0.57 Yes -30 0.35 No 37 57.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 155233500 - NM_001294338 CLK2 1 4.43 6.65 71 7.73 78.91 25 5.12 No 43 -3.66 No 0 0 No -24 0.73 Yes 46 63.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 155235825 - NM_001294338 CLK2 1 0.1 0.13 8 8.35 78.61 36 6.73 Yes 4 1.2 Yes 0 0 No -35 0.73 Yes 35 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155237938 - NM_001294338 CLK2 1 0.87 0.78 34 -12.67 0 16 3.87 No 60 0.74 No 25 0.62 Yes -32 0.71 Yes 28 47.33 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 155237989 - NM_001294338 CLK2 1 0.27 0.22 12 -5.69 0 17 4.36 No 9 0.66 No 0 0 No -42 0.52 No 49 41.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155238237 - NM_001294338 CLK2 1 0.24 0.18 12 8.6 86.47 65 7.48 Yes 28 1.95 Yes 0 0 No -40 0.83 Yes 30 89.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155238584 - NM_001294338 CLK2 1 37.28 18.28 72 2.84 70.6 150 13.43 Yes 72 2.41 Yes 21 0.66 Yes -41 0.4 No 29 74.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 155239505 - NM_001294338 CLK2 1 36.01 23.42 72 0.85 74.8 40 4.66 No 27 0.45 No 22 0.92 Yes -25 0.89 Yes 45 91.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155239985 - NM_001294338 CLK2 1 0.17 0.13 9 7.28 85.02 30 7.8 Yes 17 1.6 Yes 0 0 No -29 0.94 Yes 41 95.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155242207 - NM_001294338 CLK2 1 0.34 0.29 16 10.69 89.4 24 4.53 No 17 1.05 Yes 0 0 No -29 0.83 Yes 41 93.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74912307 + NM_001130028 CLK3 1 1.41 1.69 63 5.54 82.21 27 5.29 No 14 0.63 No 26 0.96 Yes -26 0.9 Yes 44 95.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 74919329 + NM_001130028 CLK3 1 0.14 0.18 12 4.78 81.72 32 5.92 Yes 58 0.78 Yes 31 0.74 Yes -31 0.61 No 39 64.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 74921796 + NM_001130028 CLK3 1 0.09 0.1 7 4.82 81.31 20 5.57 Yes 7 0.77 Yes 0 0 No -19 0.43 No 51 73.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 74922044 + NM_001130028 CLK3 1 0.11 0.13 8 -6.17 73.68 21 4.53 No 8 0.92 Yes 23 0.85 Yes -20 0.57 No 44 67.99 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 178032867 - NM_020666 CLK4 1 3.8 2.54 62 7.68 85.15 28 6.09 Yes 15 0.89 Yes 27 0.72 Yes -27 0.68 Yes 43 63.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 178044433 - NM_020666 CLK4 1 1.36 0.35 19 0.22 68.9 87 8.65 Yes 74 0.86 Yes 22 0.69 Yes -20 0.54 No 35 52.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 178047675 - NM_020666 CLK4 1 4.09 1.35 54 12.75 93.36 23 5.68 Yes 56 0.62 No 27 0.86 Yes -27 0.91 Yes 43 95.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 178049461 - NM_020666 CLK4 1 8.74 2.92 61 10.5 88.39 51 8.66 Yes 50 1.3 Yes 25 0.04 Yes -50 0.69 Yes 20 79.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 95659753 - NM_024734 CLMN 1 4.99 1.32 40 8.79 89.4 31 6.71 Yes 18 2.52 Yes 30 0.94 Yes -30 0.91 Yes 40 93.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 95660799 - NM_024734 CLMN 1 2.11 0.35 18 9.01 84.24 33 8.67 Yes 20 1.91 Yes 0 0 No -32 0.92 Yes 38 97.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95694859 - NM_024734 CLMN 1 0.76 0.13 8 5.43 0 18 4.47 No 21 1.38 Yes 0 0 No -21 0.82 Yes 49 81.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28488952 - NM_001286104 CLN3 1 0.23 0.17 10 3.15 0 36 5.19 No 16 1.92 Yes 0 0 No -28 0.94 Yes 42 89.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28491087 - NM_001286104 CLN3 1 1.65 0.9 39 2.91 83.57 30 6.56 Yes 17 1.23 Yes 30 0.72 Yes -30 0.87 Yes 40 81.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 28493513 - NM_001286104 CLN3 1 0.31 0.24 13 -2.29 0 15 4 No 2 1.17 Yes 0 0 No -14 0.76 Yes 56 69.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77569591 + NM_006493 CLN5 1 0.17 0.15 10 1.47 62.08 41 5.19 No 28 0.65 No 0 0 No -37 0.43 No 33 65.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77569977 + NM_006493 CLN5 1 0.27 0.25 16 9.48 95.97 25 7.49 Yes 42 0.74 No 0 0 No -24 0.81 Yes 46 76.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 77572177 + NM_006493 CLN5 1 6.79 5.74 71 9.2 87.76 25 5.92 Yes 12 1.29 Yes 0 0 No -24 0.7 Yes 46 63.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 77574064 + NM_006493 CLN5 1 0.34 0.32 16 4.77 83.96 44 7.37 Yes 3 1.35 Yes 0 0 No -33 0.74 Yes 37 79.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 68502059 - NM_017882 CLN6 1 0.1 0.18 12 5.81 82.73 44 6.89 Yes 8 1.11 Yes 20 0.8 Yes -35 0.55 No 35 85.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 68502957 - NM_017882 CLN6 1 0.06 0.13 7 7.69 85.48 29 6.48 Yes 16 0.61 No 0 0 No -28 0.95 Yes 42 94.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 68504080 - NM_017882 CLN6 1 0.63 0.69 34 3.69 80.88 29 7.34 Yes 16 0.87 Yes 0 0 No -28 0.8 Yes 42 90.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 68504080 - NM_017882 CLN6 1 0.11 0.13 7 3.69 80.88 29 7.34 Yes 16 0.87 Yes 0 0 No -28 0.8 Yes 42 90.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 1721089 + NM_018941 CLN8 1 2.47 0.35 15 9.03 97.45 28 6.45 Yes 60 -3.6 No 22 0.81 Yes -27 0.72 Yes 43 65.53 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 1728143 + NM_018941 CLN8 1 1.07 0.14 10 1.22 70.59 25 4.98 No 60 -4.87 No 0 0 No -24 0.83 Yes 46 79.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 1728628 + NM_018941 CLN8 1 2.73 0.39 19 -5.34 62.42 64 8.48 Yes 51 0.84 Yes 0 0 No -27 0.67 Yes 37 72.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 1728631 + NM_018941 CLN8 1 0.7 0.11 8 -4.5 52.91 67 8.62 Yes 54 0.84 Yes 0 0 No -30 0.57 No 34 66.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 77332686 - NM_001311199 CLNS1A 1 0.09 0.33 17 8.37 84.03 29 7.07 Yes 10 0.63 No 0 0 No -28 0.73 Yes 42 62.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 77333735 - NM_001311199 CLNS1A 1 0.32 1.42 49 2.82 73.35 44 7.92 Yes 31 1.1 Yes 19 0.52 Yes -23 0.65 No 47 74.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 77334630 - NM_001311199 CLNS1A 1 0.08 0.32 19 11.05 98.16 24 6.32 Yes 11 1.43 Yes 0 0 No -23 0.9 Yes 47 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77336861 - NM_001311199 CLNS1A 1 0.99 4.46 69 -0.46 81.79 25 5.38 No 18 0.4 No 0 0 No -24 0.5 No 46 52.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 56301693 - NM_001267843 CLOCK 1 1.36 0.33 20 5.9 84.43 31 6.8 Yes 28 0.9 Yes 0 0 No -30 0.65 No 35 84.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 56304575 - NM_001267843 CLOCK 1 2.68 0.44 27 2.87 74.78 31 6.71 Yes 18 1.29 Yes 30 0.78 Yes -30 0.87 Yes 40 92.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 56336952 - NM_001267843 CLOCK 1 3.09 1.13 43 6.44 84.61 30 4.02 No 3 0.74 No 0 0 No -29 0.7 Yes 41 68.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 56337205 - NM_001267843 CLOCK 1 0.34 0.14 9 10.21 82.95 29 5.48 No 19 0.06 No 0 0 No -31 0.4 No 49 44.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 56347435 - NM_001267843 CLOCK 1 4.28 1.97 61 7.69 87.73 22 7.49 Yes 41 0.33 No 0 0 No -32 0.52 No 44 58.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 56348662 - NM_001267843 CLOCK 1 0.42 0.17 11 5.86 76.7 16 5.36 No 3 1.22 Yes 0 0 No -26 0.56 No 44 47.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 56357400 - NM_001267843 CLOCK 1 1.2 0.17 10 10.86 86.44 37 6.56 Yes 24 0.6 No 0 0 No -36 0.77 Yes 34 69.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 57426126 + NM_006831 CLP1 1 0.31 0.15 10 2.28 0 36 6.83 Yes 51 1.08 Yes 0 0 No -39 0.46 No 35 68.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 57426901 + NM_006831 CLP1 1 0.5 0.35 18 0.89 65.86 13 4.84 No 0 0.73 No 23 0.92 Yes -23 0.79 Yes 47 79.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 57426932 + NM_006831 CLP1 1 0.32 0.22 14 -3.35 0 9 3.87 No 14 0.59 No 20 0.65 Yes -26 0.6 No 44 46.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 57426935 + NM_006831 CLP1 1 0.51 0.32 17 -6.1 0 12 4.24 No 17 0.59 No 20 0.65 Yes -29 0.6 No 28 42.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 72004656 - NM_001258394 CLPB 1 0.35 0.32 14 -2.32 0 29 6.22 Yes 16 1.48 Yes 0 0 No -28 0.9 Yes 42 89.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72019670 - NM_001258394 CLPB 1 0.33 0.28 18 3.76 0 29 7.21 Yes 16 1.1 Yes 21 0.73 Yes -24 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 72065434 - NM_001258394 CLPB 1 0.09 0.13 8 3.39 83.67 26 7.64 Yes 13 1.06 Yes 25 0.91 Yes -25 0.93 Yes 45 90.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 6368095 + NM_006012 CLPP 1 0.07 0.25 16 2.62 74.18 50 8.83 Yes 37 0.8 Yes 0 0 No -25 0.68 Yes 45 37.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 6368637 + NM_006012 CLPP 1 0.04 0.14 10 7.88 85.44 29 5.45 No 48 -2.72 No 0 0 No -24 0.68 Yes 42 87.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 45465894 + NM_001282176 CLPTM1 1 0.11 0.17 10 8.3 93.04 28 5.24 No 6 1.54 Yes 0 0 No -22 0.72 Yes 48 63.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 45492400 + NM_001282176 CLPTM1 1 0.15 0.24 13 5.87 71.04 14 5.39 No 1 1.36 Yes 0 0 No -22 0.7 Yes 50 52.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 45495810 + NM_001282176 CLPTM1 1 0.1 0.19 13 9.33 86.55 18 7.02 Yes 5 0.68 No 20 0.4 Yes -20 0.69 Yes 50 75.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 1319344 - NM_030782 CLPTM1L 1 0.06 0.11 8 8.71 83.97 41 6.93 Yes 28 1.44 Yes 0 0 No -40 0.95 Yes 30 96.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1324915 - NM_030782 CLPTM1L 1 0.05 0.17 10 2.78 83.77 22 4.78 No 38 0.56 No 0 0 No -21 0.89 Yes 49 60.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 1324928 - NM_030782 CLPTM1L 1 0.07 0.22 14 -15.48 0 29 6.44 Yes 67 1.36 Yes 0 0 No -28 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 1330519 - NM_030782 CLPTM1L 1 0.24 0.58 30 6.99 76.97 19 5.95 Yes 31 -0.01 No 22 0.66 Yes -32 0.66 No 38 39.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 1330547 - NM_030782 CLPTM1L 1 0.25 0.63 31 0.33 72.21 67 8.48 Yes 75 -4.38 No 24 0.43 Yes -15 0.74 Yes 55 42.27 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 1332050 - NM_030782 CLPTM1L 1 0.2 0.68 37 10.04 92 24 5.28 No 24 0.66 No 0 0 No -30 0.61 No 40 48.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 1338115 - NM_030782 CLPTM1L 1 0.23 0.72 35 0.79 63.03 27 4.99 No -1 0.9 Yes 28 0.79 Yes -26 0.33 No 59 31.5 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 1338144 - NM_030782 CLPTM1L 1 0.08 0.24 15 6.23 77.26 35 6 Yes 74 -2.21 No 0 0 No -34 0.33 No 36 45.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 1339118 - NM_030782 CLPTM1L 1 7.74 18.32 72 5.19 75.69 35 6.4 Yes 54 2.16 Yes 0 0 No -31 0.74 Yes 39 77.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1341951 - NM_030782 CLPTM1L 1 0.07 0.21 11 3.43 77 18 5.34 No 5 0.8 Yes 0 0 No -24 0.44 No 46 64.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 1341971 - NM_030782 CLPTM1L 1 0.06 0.22 15 3.37 0 21 6.08 Yes 8 0.55 No 0 0 No -34 0.66 Yes 40 54.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 65443238 - NR_133680 CLPX 1 0.27 0.28 16 -3.34 59.33 22 4.8 No 49 0.66 No 0 0 No -21 0.73 Yes 22 28.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 65445976 - NR_133680 CLPX 1 0.08 0.11 7 -21.79 0 35 5.41 No 61 0.78 Yes 0 0 No -26 0.49 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65454978 - NR_133680 CLPX 1 0.07 0.11 8 -5.56 0 9 3.87 No 49 1.01 Yes 0 0 No -28 0.61 No 42 63.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65472561 - NR_133680 CLPX 1 0.52 0.46 28 6.64 75.24 24 3.96 No 70 0.54 No 24 0.84 Yes -27 0.83 Yes 43 87.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 36203019 - NM_001190481 CLSPN 1 0.34 0.44 22 4.41 0 35 6 Yes 35 1.36 Yes 0 0 No -34 0.2 No 41 56.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36205128 - NM_001190481 CLSPN 1 0.14 0.15 7 -8.12 81.9 25 7.33 Yes 73 1.64 Yes 0 0 No -24 0.88 Yes 46 89.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36212579 - NM_001190481 CLSPN 1 0.83 1.01 41 1.65 73.1 18 4.9 No 44 0.32 No 0 0 No -56 0.37 No 43 64.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 36213661 - NM_001190481 CLSPN 1 0.08 0.11 7 -9.03 71.27 50 8.63 Yes 37 1.29 Yes 0 0 No -28 0.47 No 21 62.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36215254 - NM_001190481 CLSPN 1 1.88 1.13 46 7.99 83.57 29 5.41 No 16 0.85 Yes 28 0.93 Yes -28 0.94 Yes 42 96.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 9795192 - NM_001009566 CLSTN1 1 0.2 0.25 14 7.76 69.97 34 6.08 Yes 54 2.55 Yes 0 0 No -33 0.86 Yes 37 88.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9795781 - NM_001009566 CLSTN1 1 0.09 0.11 7 -0.15 0 26 4.43 No 56 0.76 No 0 0 No -26 0.8 Yes 44 83.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 9795785 - NM_001009566 CLSTN1 1 0.28 0.33 21 4.21 81.8 22 4.1 No 52 0.77 No 0 0 No -22 0.84 Yes 48 84.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 9804062 - NM_001009566 CLSTN1 1 0.07 0.13 9 -14.9 0 26 5.09 No 44 0.46 No 0 0 No -25 0.44 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 9804079 - NM_001009566 CLSTN1 1 0.1 0.15 8 4.44 74.52 21 5.12 No 27 0.47 No 23 0.92 Yes -20 0.65 No 50 56.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 9805542 - NM_001009566 CLSTN1 1 0.12 0.17 9 7.89 92.95 26 7.55 Yes 13 1.22 Yes 0 0 No -25 0.91 Yes 45 93.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9811721 - NM_001009566 CLSTN1 1 0.17 0.21 12 6.35 89.02 16 5.1 No 54 0.45 No 0 0 No -43 0.36 No 27 59.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 9811721 - NM_001009566 CLSTN1 1 1.01 1.57 41 6.35 89.02 16 5.1 No 54 0.45 No 0 0 No -43 0.36 No 27 59.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 9869466 - NM_001009566 CLSTN1 1 6.26 1.19 46 9.27 89.61 29 5.02 No 1 0.92 Yes 0 0 No -24 0.82 Yes 46 61.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 7285373 + NM_014718 CLSTN3 1 1.09 0.22 15 11.9 89.93 23 5.74 Yes 10 1.12 Yes 0 0 No -22 0.73 Yes 48 89.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7289089 + NM_014718 CLSTN3 1 0.85 0.21 12 8.21 81.88 36 4.68 No 65 0.83 Yes 0 0 No -23 0.75 Yes 47 82.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7290512 + NM_014718 CLSTN3 1 0.81 0.22 10 4.58 82.11 54 7.26 Yes 6 0.58 No 26 0.91 Yes -44 0.41 No 27 61.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 7290593 + NM_014718 CLSTN3 1 0.33 0.1 7 6.89 71.95 46 6.99 Yes 57 1.38 Yes 0 0 No -28 0.86 Yes 42 76.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7291331 + NM_014718 CLSTN3 1 0.38 0.15 9 7.32 97.59 17 5.63 Yes 4 0 No 25 0.92 Yes -25 0.92 Yes 45 91.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7296138 + NM_014718 CLSTN3 1 0.65 0.14 8 4.14 74.95 31 4.95 No 3 0.49 No 0 0 No -30 0.85 Yes 40 90.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 36197562 + NM_007096 CLTA 1 0.03 0.14 8 -18.14 67.22 19 4.87 No 43 0.9 Yes 0 0 No -41 0.84 Yes 29 75.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 36203949 + NM_007096 CLTA 1 0.13 0.83 42 10.74 89.96 33 6.63 Yes 55 -1.99 No 0 0 No -32 0.91 Yes 38 94.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 36211604 + NM_007096 CLTA 1 21.78 3.93 70 0.71 0 34 6.2 Yes 21 0.16 No 0 0 No -28 0.6 No 42 80.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 175823534 - NR_045724 CLTB 1 0.4 0.56 29 8.03 82.25 98 10.43 Yes 61 3.13 Yes 27 0.94 Yes -27 0.86 Yes 43 90.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 57728842 + NM_001288653 CLTC 1 0.03 0.17 11 8.96 95.17 24 6.5 Yes 11 0.76 No 0 0 No -23 0.43 No 47 57.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 57738822 + NM_001288653 CLTC 1 0.02 0.22 15 3.14 88.88 23 5.11 No 61 1.1 Yes 0 0 No -23 0.89 Yes 47 86.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 57746174 + NM_001288653 CLTC 1 0.02 0.14 8 2.25 73.34 40 6.51 Yes 43 0.66 No 0 0 No -40 0.85 Yes 30 91.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 57759625 + NM_001288653 CLTC 1 0.02 0.17 11 0.59 0 31 6.08 Yes 62 0.04 No 23 0.67 Yes -30 0.61 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 57761244 + NM_001288653 CLTC 1 0.01 0.1 7 -1.52 0 13 3.19 No 57 1.24 Yes 27 0.78 Yes -29 0.64 No 41 67.89 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 57764361 + NM_001288653 CLTC 1 0.27 1.76 57 10.48 89.86 14 4.39 No 58 1.64 Yes 27 0.88 Yes -27 0.71 Yes 43 85.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 57768612 + NM_001288653 CLTC 1 0.46 3.51 68 7.02 78.66 27 7 Yes 14 1.08 Yes 0 0 No -26 0.73 Yes 44 63.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 57771093 + NM_001288653 CLTC 1 0.02 0.13 9 -0.63 0 66 8.37 Yes 53 2.49 Yes 0 0 No -29 0.65 No 42 36.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2597559 - NM_015229 CLUH 1 0.18 0.42 22 -1.08 0 15 4.58 No 32 -0.45 No 0 0 No -44 0.77 Yes 26 79.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 2598722 - NM_015229 CLUH 1 0.13 0.15 10 1.09 63.21 40 6.24 Yes 9 -1.88 No 0 0 No -21 0.54 No 40 34.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 2598912 - NM_015229 CLUH 1 0.18 0.21 9 8.02 87.29 17 5.39 No 22 0.53 No 18 0.09 Yes -22 0.81 Yes 48 76.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 2599149 - NM_015229 CLUH 1 0.22 0.26 19 12.2 88.99 36 6.42 Yes 23 0.57 No 0 0 No -24 0.7 Yes 35 58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 2599833 - NM_015229 CLUH 1 135.51 66.99 72 3.93 82.14 21 4.8 No 8 0.6 No 20 0.96 Yes -20 0.97 Yes 50 97.33 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 2600666 - NM_015229 CLUH 1 0.35 0.6 30 6.05 82.76 28 5.24 No 3 0.8 Yes 0 0 No -27 0.82 Yes 43 67.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 2604077 - NM_015229 CLUH 1 0.47 1.17 44 5.29 84.8 24 4.42 No 75 0.92 Yes 23 0.87 Yes -23 0.58 No 47 52.13 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 2604715 - NM_015229 CLUH 1 0.09 0.19 14 3.92 80.32 23 6.78 Yes 10 0.81 Yes 0 0 No -22 0.94 Yes 48 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2604806 - NM_015229 CLUH 1 0.26 0.65 26 -0.02 0 13 4.24 No 17 -1.09 No 18 0.95 Yes -29 0.74 Yes 41 80.5 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 2604833 - NM_015229 CLUH 1 0.35 0.83 38 0.78 77.83 24 4.79 No 70 -2.87 No 20 0.8 Yes -23 0.36 No 47 48.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 2605028 - NM_015229 CLUH 1 1.21 2.72 61 0.79 0 28 5.29 No 15 0.18 No 0 0 No -27 0.85 Yes 43 90.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 2605047 - NM_015229 CLUH 1 0.28 0.64 31 3.07 70.29 9 6.4 Yes -4 1.43 Yes 23 0.97 Yes -34 0.52 No 62 68.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 2611829 - NM_015229 CLUH 1 0.21 0.14 9 5.89 69.23 58 8.11 Yes 45 1.61 Yes 0 0 No -57 0.85 Yes 13 93.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31717741 + NR_024034 CLUHP3 1 18.18 3.14 63 10.25 86.22 36 5.79 Yes 1 1.99 Yes 24 0.56 Yes -31 0.7 Yes 39 83.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 31717902 + NR_024034 CLUHP3 1 0.68 0.11 8 6.08 86.89 28 5.02 No 74 0.19 No 0 0 No -22 0.51 No 48 43.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 25081887 - NR_002174 CMAHP 1 17.74 3.21 52 9.57 84.21 29 6.28 Yes 46 -1.51 No 28 0.72 Yes -28 0.69 Yes 42 66.12 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 25106239 - NR_002174 CMAHP 1 1.23 0.22 11 10.99 93.04 33 5.63 Yes 44 0.6 No 0 0 No -26 0.59 No 44 56.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 25106755 - NR_002174 CMAHP 1 5.59 0.46 22 6.52 86.58 41 6.32 Yes 1 0.56 No 21 0.78 Yes -31 0.56 No 39 59.86 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 25110656 - NR_002174 CMAHP 1 0.44 0.11 7 10.52 90.35 24 6.2 Yes 11 1.3 Yes 0 0 No -23 0.77 Yes 47 72.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 25114661 - NR_002174 CMAHP 1 3.96 1.19 42 -3.58 83.46 99 9.51 Yes 74 1.98 Yes 0 0 No -22 0.67 Yes 35 90.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 25119459 - NR_002174 CMAHP 1 4.02 1.14 40 5.27 83.86 36 4.91 No 20 0.79 Yes 0 0 No -32 0.57 No 38 60.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 25126041 - NR_002174 CMAHP 1 3.21 0.68 31 9.37 87.58 15 5.17 No 2 0.67 No 0 0 No -27 0.57 No 43 78.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 25128086 - NR_002174 CMAHP 1 0.49 0.24 12 4.44 79.33 20 4.72 No 7 0.34 No 24 0.73 Yes -24 0.85 Yes 46 84.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 22202028 + NR_135117 CMAS 1 0.14 0.19 10 7.28 94.67 25 5.07 No 0 0.82 Yes 0 0 No -24 0.67 Yes 51 67.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 22218035 + NR_135117 CMAS 1 0.08 0.11 7 4.4 71.67 39 6.1 Yes 1 0.3 No 21 0.8 Yes -38 0.84 Yes 32 88.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 10300541 - NM_138809 CMBL 1 0.37 0.36 19 9.28 91.36 33 7.72 Yes 20 0.84 Yes 0 0 No -32 0.77 Yes 38 86.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10302908 - NM_138809 CMBL 1 0.17 0.22 11 7.23 92.36 21 8.02 Yes 73 0.16 No 0 0 No -19 0.21 No 39 54.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 28312436 + NM_001331187 CMC1 1 0.42 0.58 27 4.74 84.41 31 6.39 Yes 18 0.96 Yes 0 0 No -30 0.76 Yes 40 84.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 28328606 + NM_001331187 CMC1 1 0.23 0.29 17 9.57 89.98 21 7.96 Yes 8 2.08 Yes 0 0 No -20 0.8 Yes 50 91.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 28334226 + NM_001331187 CMC1 1 0.14 0.17 12 10.41 86.39 24 6.09 Yes 11 1.11 Yes 24 0.85 Yes -23 0.62 No 47 80.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 28335924 + NM_001331187 CMC1 1 1.36 1.79 52 8.29 90.39 24 6.85 Yes 11 0.25 No 28 0.47 Yes -33 0.68 Yes 37 70.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 28358243 + NM_001331187 CMC1 1 0.58 1.39 50 3.63 75.01 25 6.08 Yes 12 1.25 Yes 24 0.93 Yes -24 0.74 Yes 46 84.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 28360222 + NM_001331187 CMC1 1 0.08 0.21 12 11.75 89.57 72 7.07 Yes 59 1.39 Yes 40 0.55 Yes -29 0.6 No 46 72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 81012313 - NM_020188 CMC2 1 0.1 0.21 13 10.12 90.24 36 6.71 Yes 23 1.73 Yes 24 0.88 Yes -24 0.77 Yes 46 74.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 81014485 - NM_020188 CMC2 1 17.28 35.39 72 5.47 0 39 6.56 Yes 71 1.39 Yes 38 0.57 Yes -38 0.63 No 32 85.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 81014485 - NM_020188 CMC2 1 0.49 1.04 43 5.47 0 39 6.56 Yes 71 1.39 Yes 38 0.57 Yes -38 0.63 No 32 85.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 81014489 - NM_020188 CMC2 1 0.5 1.06 38 3.09 84.41 35 6.24 Yes 67 1.39 Yes 38 0.57 Yes -34 0.62 No 36 84.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 81021613 - NM_020188 CMC2 1 0.22 0.49 26 10.24 86.22 29 7.73 Yes 16 1.75 Yes 0 0 No -28 0.9 Yes 42 95.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81022202 - NM_020188 CMC2 1 0.1 0.24 13 9.31 90.69 25 3.92 No 51 1.13 Yes 25 0.75 Yes -25 0.65 No 45 86.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 81025563 - NM_020188 CMC2 1 1.13 2.58 63 12.78 96.43 21 6.2 Yes 8 1.51 Yes 25 0.77 Yes -25 0.85 Yes 45 86.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 81030626 - NM_020188 CMC2 1 0.11 0.25 15 9.53 86.54 27 6.1 Yes 14 0.54 No 32 0.93 Yes -32 0.91 Yes 38 97.57 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 81730134 + NM_198390 CMIP 1 0.25 0.14 10 3.12 67.2 33 6.63 Yes 47 1.27 Yes 27 0.94 Yes -59 0.54 No 38 51.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 81734955 + NM_198390 CMIP 1 0.43 0.4 20 8.34 77.53 21 6.07 Yes 8 1.08 Yes 0 0 No -21 0.82 Yes 49 82.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 47823969 + NM_016308 CMPK1 1 0.25 1.19 47 8.18 87.51 20 4.99 No 7 1.26 Yes 27 0.7 Yes -27 0.6 No 51 72.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 47828759 + NM_016308 CMPK1 1 0.1 0.49 26 9.21 89.21 26 6.79 Yes 65 -1.88 No 0 0 No -25 0.95 Yes 45 94.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 47833006 + NM_016308 CMPK1 1 0.05 0.24 14 4.7 70.29 29 6.23 Yes 16 1.77 Yes 0 0 No -20 0.44 No 42 72.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 47836708 + NM_016308 CMPK1 1 0.02 0.14 9 4.67 80.57 15 4.97 No 2 1.44 Yes 0 0 No -22 0.96 Yes 48 95.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 47836734 + NM_016308 CMPK1 1 0.04 0.24 16 3.97 77.98 12 5.2 No 28 1.38 Yes 0 0 No -48 0.81 Yes 22 74.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 47840875 + NM_016308 CMPK1 1 0.01 0.15 10 -1.5 0 17 3.99 No 63 0.59 No 0 0 No -27 0.39 No 43 56.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 7004575 - NM_001256477 CMPK2 1 0.68 0.14 7 6 92.58 21 5.74 Yes 8 0.6 No 20 0.7 Yes -20 0.75 Yes 50 71.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 99881149 + NM_001167924 CMSS1 1 0.63 0.69 35 2.53 72.78 43 8.68 Yes 56 0.35 No 0 0 No -38 0.32 No 32 50.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 32526274 - NM_017801 CMTM6 1 0.07 0.18 11 8.89 93.53 29 6.33 Yes 16 0.59 No 0 0 No -22 0.74 Yes 48 72.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 37401436 + NM_015050 CMTR1 1 0.19 0.17 10 9.92 78.26 22 5.74 Yes 54 1.43 Yes 0 0 No -21 0.89 Yes 49 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 37404084 + NM_015050 CMTR1 1 0.11 0.19 13 10.83 83.95 32 5.74 Yes 28 0.87 Yes 26 0.75 Yes -26 0.72 Yes 45 76.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 37425176 + NM_015050 CMTR1 1 0.15 0.33 13 9.48 85.28 32 6 Yes 75 -2.36 No 0 0 No -34 0.78 Yes 36 68.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 37430666 + NM_015050 CMTR1 1 0.2 0.22 13 3.16 84.4 25 6 Yes 69 0.77 No 0 0 No -24 0.62 No 46 77.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 37430666 + NM_015050 CMTR1 1 0.15 0.15 10 3.16 84.4 25 6 Yes 69 0.77 No 0 0 No -24 0.62 No 46 77.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 37441220 + NM_015050 CMTR1 1 0.13 0.19 12 5.45 70.77 28 6.45 Yes NA NA NA 27 0.46 Yes -27 0.76 Yes 43 65.43 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 37443621 + NM_015050 CMTR1 1 0.48 0.81 38 -4.89 63.73 17 4.69 No 25 -1.52 No 0 0 No -20 0.57 No 53 20.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 37445331 + NM_015050 CMTR1 1 0.12 0.14 9 1.89 0 15 4.58 No 68 -2.36 No 34 0.15 Yes -17 0.41 No 53 57.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 37447755 + NM_015050 CMTR1 1 0.09 0.14 8 6.64 74.3 23 6.05 Yes 46 1.21 Yes 28 0.95 Yes -22 0.33 No 43 30.96 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 128890124 - NM_001127196 CNBP 1 32.41 308.26 72 0.05 0 34 6.16 Yes 39 0.26 No 30 0.71 Yes -31 0.65 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 128890127 - NM_001127196 CNBP 1 2.51 23.69 72 1.52 0 31 5.92 Yes 36 0.27 No 30 0.71 Yes -28 0.69 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 128890129 - NM_001127196 CNBP 1 0.01 0.14 7 0.52 0 29 5.74 Yes 34 0.27 No 30 0.71 Yes -26 0.69 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 128890153 - NM_001127196 CNBP 1 0.11 1.07 48 -1.83 0 13 4.24 No 10 0.24 No 22 0.65 Yes -22 0.46 No 48 67.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 128890352 - NM_001127196 CNBP 1 0.25 0.97 43 10.45 87.91 25 5.57 Yes 51 1.19 Yes 24 0.63 Yes -24 0.81 Yes 46 87.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 128890352 - NM_001127196 CNBP 1 0.12 0.46 27 10.45 87.91 25 5.57 Yes 51 1.19 Yes 24 0.63 Yes -24 0.81 Yes 46 87.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 72168446 + NM_001168499 CNDP2 1 0.23 0.97 42 7.16 81.36 42 4.87 No 13 0.54 No 25 0.87 Yes -25 0.79 Yes 45 83.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 72180492 + NM_001168499 CNDP2 1 0.14 0.44 22 8.59 82.86 37 6.24 Yes 24 0.89 Yes 0 0 No -36 0.53 No 34 46.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 72183466 + NM_001168499 CNDP2 1 0.04 0.14 8 -4.08 0 25 6.44 Yes 12 2.46 Yes 0 0 No -24 0.85 Yes 46 86.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 72183466 + NM_001168499 CNDP2 1 0.08 0.26 16 -4.08 0 25 6.44 Yes 12 2.46 Yes 0 0 No -24 0.85 Yes 46 86.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 50060609 + NM_153261 CNEP1R1 1 0.29 0.17 11 4.15 92.34 22 7.98 Yes 65 1.06 Yes 25 0.6 Yes -25 0.53 No 45 75.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 50068017 + NM_153261 CNEP1R1 1 0.41 0.28 16 1.72 0 41 4.81 No 70 -3.09 No 30 0.31 Yes -20 0.59 No 50 67.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 50068965 + NM_153261 CNEP1R1 1 0.2 0.14 10 5.04 88.34 18 4.88 No 5 0.8 Yes 0 0 No -25 0.82 Yes 45 68.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 50069331 + NM_153261 CNEP1R1 1 0.27 0.21 12 3.84 0 33 7.28 Yes 20 0.1 No 0 0 No -32 0.91 Yes 38 84.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 54902845 - NM_005776 CNIH1 1 0.28 0.88 31 3.1 67.51 39 7.61 Yes 26 1.86 Yes 28 0.62 Yes -38 0.79 Yes 32 96.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 224548153 + NM_001277200 CNIH4 1 0.17 0.24 14 1.13 62.72 47 6.95 Yes 34 1.18 Yes 24 0.37 Yes -33 0.75 Yes 37 71.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 224548165 + NM_001277200 CNIH4 1 0.09 0.13 8 -3.1 0 22 4.52 No 46 1.15 Yes 24 0.37 Yes -22 0.39 No 48 34.08 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 224551810 + NM_001277200 CNIH4 1 1.49 2.63 67 6.41 72.86 29 4.8 No 16 0.16 No 28 0.49 Yes -34 0.38 No 42 62.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 224558599 + NM_001277200 CNIH4 1 0.26 0.67 34 4.74 84.41 25 6.7 Yes 12 1.67 Yes 0 0 No -24 0.95 Yes 46 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224559031 + NM_001277200 CNIH4 1 0.82 2.03 57 3.83 80.89 25 4.9 No 60 1.69 Yes 0 0 No -24 0.84 Yes 46 81.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224563496 + NM_001277200 CNIH4 1 128.4 7.28 72 9.59 87.87 24 5.78 Yes 11 1.32 Yes 23 0.82 Yes -23 0.91 Yes 47 90.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 224562668 + NM_001277200 CNIH4 1 1.15 0.1 7 9.65 85.72 28 5.36 No 15 0.42 No 0 0 No -27 0.74 Yes 43 91.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224563496 + NM_001277200 CNIH4 1 3554.68 188.67 72 9.59 87.87 24 5.78 Yes 11 1.32 Yes 23 0.82 Yes -23 0.91 Yes 47 90.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 154727699 - NM_173515 CNKSR3 1 2.48 0.67 31 6.67 80.91 35 6 Yes 46 0.99 Yes 0 0 No -34 0.69 Yes 36 47.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 154748135 - NM_173515 CNKSR3 1 0.41 0.11 8 1.54 0 20 4.58 No 13 0.52 No 0 0 No -20 0.64 No 50 80.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 154766924 - NM_173515 CNKSR3 1 1.12 0.43 19 10.45 86.6 15 5.56 Yes -2 0.62 No 0 0 No -24 0.62 No 46 68.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1026975 + NM_001303501 CNN2 1 0.23 1.47 46 8.03 71.79 26 6 Yes 13 1.7 Yes 25 0.92 Yes -25 0.6 No 45 68.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 1032561 + NM_001303501 CNN2 1 0.09 0.69 31 2.7 0 31 6.76 Yes 18 1.94 Yes 0 0 No -30 0.97 Yes 40 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1036357 + NM_001303501 CNN2 1 0.02 0.11 7 10.13 88.78 9 5.57 Yes -4 0.01 No 0 0 No -24 0.87 Yes 46 72.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1036534 + NM_001303501 CNN2 1 0.02 0.13 9 1.08 0 16 3.93 No 41 0.62 No 0 0 No -23 0.42 No 17 60.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1036877 + NM_001303501 CNN2 1 0.28 1.17 42 2.28 0 40 7.54 Yes 27 0.84 Yes 29 0.62 Yes -39 0.52 No 41 60.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 104680783 + NM_199076 CNNM2 1 27.25 2.24 61 -0.29 63.49 42 7.34 Yes 29 1.32 Yes 0 0 No -41 0.65 No 29 67.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 104685354 + NM_199076 CNNM2 1 3.34 0.33 18 8.15 77.81 29 5.57 Yes -4 1.2 Yes 0 0 No -28 0.77 Yes 42 73.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104687101 + NM_199076 CNNM2 1 34.82 2.93 67 10.83 92.89 37 4.86 No 9 0.62 No 21 0.56 Yes -37 0.52 No 49 51.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 104787121 + NM_199076 CNNM2 1 5.06 0.44 22 9 90.26 22 5.2 No 9 0.81 Yes 0 0 No -21 0.88 Yes 49 89.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104814419 + NM_199076 CNNM2 1 0.71 0.1 7 8.31 84.16 85 9.67 Yes 72 2.06 Yes 0 0 No -24 0.37 No 46 36.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 104831530 + NM_199076 CNNM2 1 6.41 0.65 31 10.65 86.2 25 6.57 Yes 12 1.91 Yes 24 0.94 Yes -24 0.96 Yes 46 91.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 97493840 + NM_017623 CNNM3 1 0.88 0.42 25 2.58 0 46 7.55 Yes 45 1.03 Yes 0 0 No -45 0.78 Yes 25 85.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97494332 + NM_017623 CNNM3 1 0.21 0.11 7 7.27 84.82 27 5.48 No 33 1.53 Yes 0 0 No -26 0.9 Yes 44 92.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97497705 + NM_017623 CNNM3 1 3.73 1.33 53 8.59 79.63 40 6.54 Yes 27 1.07 Yes 39 0.58 Yes -39 0.85 Yes 31 87.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 97469987 + NM_020184 CNNM4 1 0.43 0.11 7 4.74 84.41 26 6.71 Yes 13 1.76 Yes 0 0 No -25 0.74 Yes 45 90.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97474968 + NM_020184 CNNM4 1 2.05 0.43 23 9.28 82.04 29 6.55 Yes 16 1.96 Yes 28 0.97 Yes -28 0.88 Yes 42 93.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 58577838 - NM_206999 CNOT1 1 0.12 0.68 37 3.32 73.28 32 5.76 Yes 53 -3.15 No 24 0.88 Yes -25 0.51 No 39 53.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 58579378 - NM_206999 CNOT1 1 0.04 0.18 12 0.47 80.19 27 5.19 No 66 0.88 Yes 0 0 No -26 0.5 No 44 40.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 58580319 - NM_206999 CNOT1 1 0.22 0.79 37 0.66 69.31 22 5.64 Yes 70 -5.75 No 21 0.76 Yes -21 0.68 Yes 49 52.38 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 58580646 - NM_206999 CNOT1 1 0.06 0.25 14 2.75 0 11 4.12 No 16 0.49 No 23 0.5 Yes -28 0.59 No 42 59.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 58580653 - NM_206999 CNOT1 1 0.04 0.18 11 -5.85 0 22 4.12 No 9 0.5 No 0 0 No -21 0.75 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 58581173 - NM_206999 CNOT1 1 0.06 0.26 14 1.19 71.35 17 5.52 No 37 0.12 No 0 0 No -35 0.67 Yes 21 53.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 58583841 - NM_206999 CNOT1 1 0.14 0.5 23 4.08 81.98 19 4.88 No 64 -4.7 No 34 0.77 Yes -18 0.36 No 51 40.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 58586078 - NM_206999 CNOT1 1 0.1 0.49 26 9.47 88.57 37 5.84 Yes 44 0.9 Yes 0 0 No -32 0.51 No 38 74.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 58587010 - NM_206999 CNOT1 1 0.08 0.33 18 6.64 86.24 19 7.06 Yes 6 1.18 Yes 0 0 No -29 0.68 Yes 52 70.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 58589334 - NM_206999 CNOT1 1 0.08 0.36 18 7.74 90.28 24 5.39 No 24 0.36 No 23 0.84 Yes -23 0.78 Yes 47 80.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 58590895 - NM_206999 CNOT1 1 7.47 24.42 72 8.22 84.35 36 5.89 Yes 23 0.02 No 27 0.33 Yes -35 0.6 No 32 47.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 58598813 - NM_206999 CNOT1 1 0.26 1.06 45 6.96 90.92 28 5.29 No 63 1.47 Yes 0 0 No -27 0.42 No 19 67.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 58599837 - NM_206999 CNOT1 1 0.16 0.61 29 3.74 0 30 7.68 Yes 17 1.89 Yes 0 0 No -29 0.87 Yes 41 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 58599841 - NM_206999 CNOT1 1 0.03 0.11 7 2.22 88.76 26 7.42 Yes 13 1.91 Yes 0 0 No -25 0.87 Yes 45 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 58607208 - NM_206999 CNOT1 1 0.12 0.43 20 4.09 83.95 39 6.85 Yes 26 1.21 Yes 0 0 No -38 0.65 No 31 75.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 58607988 - NM_206999 CNOT1 1 0.08 0.32 17 9.94 87.44 41 7.42 Yes 37 1.23 Yes 0 0 No -40 0.56 No 30 69.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 58608629 - NM_206999 CNOT1 1 0.04 0.14 10 3.16 79.62 13 5.39 No 45 0.82 Yes 0 0 No -27 0.63 No 47 77.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 58610481 - NM_206999 CNOT1 1 0.08 0.35 19 0.62 0 9 3.87 No 14 0.75 No 0 0 No -31 0.72 Yes 39 83.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 58611874 - NM_206999 CNOT1 1 0.03 0.11 7 7.96 83.92 27 5.06 No 23 1.11 Yes 0 0 No -26 0.38 No 44 47.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 58612840 - NM_206999 CNOT1 1 0.21 0.68 35 -2.16 0 34 5.78 Yes 21 0.44 No 0 0 No -33 0.82 Yes 37 66.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 58614631 - NM_206999 CNOT1 1 0.05 0.31 18 3.9 79.25 42 6.48 Yes 42 0.82 Yes 0 0 No -25 0.87 Yes 45 92.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 58616822 - NM_206999 CNOT1 1 0.04 0.14 9 2.57 76.48 9 5.39 No 44 0.75 No 21 0.91 Yes -22 0.66 No 48 48.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 58619335 - NM_206999 CNOT1 1 0.09 0.4 22 1.53 78 26 8.42 Yes -4 0.77 No 0 0 No -25 0.5 No 26 35.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 58619434 - NM_206999 CNOT1 1 0.2 0.99 43 -4.18 0 14 4.12 No 71 -3.43 No 28 0.55 Yes -13 0.61 No 43 57.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 58620686 - NM_206999 CNOT1 1 0.03 0.13 7 -2.61 62.79 38 4.86 No 15 0.66 No 31 0.81 Yes -37 0.56 No 33 72.73 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 58621765 - NM_206999 CNOT1 1 0.03 0.13 7 3.75 0 22 3.65 No 32 1.31 Yes 0 0 No -44 0.84 Yes 26 96.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 58635772 - NM_206999 CNOT1 1 0.06 0.14 8 9.13 87 32 5.53 No 51 0.43 No 0 0 No -32 0.85 Yes 38 88.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 58657314 - NM_206999 CNOT1 1 3.12 7.49 72 11.53 92.99 29 5.64 Yes 16 1.76 Yes 28 0.9 Yes -28 0.79 Yes 42 86.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 58658675 - NM_206999 CNOT1 1 0.06 0.17 8 3.75 84.95 27 5.04 No 43 0.8 Yes 0 0 No -26 0.5 No 15 57.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 58658699 - NM_206999 CNOT1 1 7.37 17.82 72 8.61 83.68 32 6.16 Yes 19 0.81 Yes 31 0.65 Yes -31 0.92 Yes 39 91.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 58659561 - NM_206999 CNOT1 1 1.12 2.51 58 9.92 91.66 28 5.29 No 55 1.54 Yes 0 0 No -27 0.62 No 15 71.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 58659755 - NM_206999 CNOT1 1 0.2 0.44 24 4.19 0 32 6 Yes 46 0.81 Yes 0 0 No -32 0.48 No 38 62.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 32747997 + NM_001256742 CNOT10 1 0.38 0.43 24 6.63 85.11 30 7.66 Yes 17 1.76 Yes 0 0 No -29 0.76 Yes 41 90.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 32754721 + NM_001256742 CNOT10 1 1.68 2.64 61 3.62 79.87 35 7 Yes 22 1.45 Yes 0 0 No -34 0.8 Yes 36 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 32757483 + NM_001256742 CNOT10 1 1.48 1.9 62 6.53 86.16 20 5.57 Yes 7 1.07 Yes 23 0.75 Yes -19 0.62 No 51 77.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 32778904 + NM_001256742 CNOT10 1 4.22 3.79 71 3.78 85.75 29 4.51 No 4 1.26 Yes 0 0 No -24 0.75 Yes 46 63.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 32806541 + NM_001256742 CNOT10 1 0.99 1 37 5.86 98.73 33 6.31 Yes 23 0.47 No 22 0.61 Yes -27 0.58 No 43 57.52 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 32809497 + NM_001256742 CNOT10 1 0.43 0.43 22 10.1 84.28 34 6.24 Yes 21 0.76 No 0 0 No -33 0.94 Yes 37 83.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 32811373 + NM_001256742 CNOT10 1 0.38 0.35 22 -0.65 79.64 38 4.56 No 10 0.63 No 27 0.93 Yes -22 0.85 Yes 48 86.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 101874299 + NM_017546 CNOT11 1 0.99 1.38 48 6.72 91.91 23 4.9 No 18 0.45 No 0 0 No -25 0.6 No 45 78.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 101881321 + NM_017546 CNOT11 1 0.56 1.42 45 1.56 81.75 23 4.6 No 43 -4.24 No 0 0 No -22 0.92 Yes 48 85.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 70695484 + NR_037615 CNOT2 1 8.99 0.56 30 8.85 88.97 30 7.04 Yes 17 1.08 Yes 29 0.77 Yes -29 0.87 Yes 41 84.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 70688590 + NR_037615 CNOT2 1 16.83 0.9 38 4.54 81.39 21 5.98 Yes 32 -2.35 No 0 0 No -20 0.33 No 50 38.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 70691538 + NR_037615 CNOT2 1 16.29 1.13 47 3.05 82.94 29 5.18 No 13 0.88 Yes 28 0.44 Yes -25 0.43 No 45 49.71 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 70695484 + NR_037615 CNOT2 1 5.51 0.36 17 8.85 88.97 30 7.04 Yes 17 1.08 Yes 29 0.77 Yes -29 0.87 Yes 41 84.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 70729253 + NR_037615 CNOT2 1 0.15 0.19 9 2.91 80.59 20 4.9 No 49 1.43 Yes 0 0 No -19 0.81 Yes 51 75.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 70730508 + NR_037615 CNOT2 1 0.65 1.03 41 10.65 83.94 24 5.89 Yes 11 1.91 Yes 0 0 No -23 0.82 Yes 47 91.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 70731535 + NR_037615 CNOT2 1 0.5 0.78 38 1.85 76.96 20 4.68 No 8 -1.08 No 26 0.84 Yes -19 0.81 Yes 51 90.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 70732423 + NR_037615 CNOT2 1 0.19 0.22 14 -0.5 56.28 22 6.93 Yes 9 0.94 Yes 21 0.58 Yes -48 0.4 No 22 72.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 70737890 + NR_037615 CNOT2 1 0.08 0.13 8 -5.4 0 16 3.86 No 43 -2.99 No 26 0.31 Yes -26 0.48 No 44 80.09 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 70737890 + NR_037615 CNOT2 1 0.62 0.86 43 -5.4 0 16 3.86 No 43 -2.99 No 26 0.31 Yes -26 0.48 No 44 80.09 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 54642991 + NM_014516 CNOT3 1 1.66 0.65 30 8.93 84.47 21 4.69 No 63 1.25 Yes 0 0 No -20 0.95 Yes 50 96.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 54645708 + NM_014516 CNOT3 1 0.26 0.13 9 7.55 88.52 25 5.08 No 12 1.45 Yes 0 0 No -24 0.95 Yes 46 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 54646661 + NM_014516 CNOT3 1 18.27 7.32 72 6.04 73.53 23 6.63 Yes 57 1.44 Yes 25 0.65 Yes -22 0.86 Yes 48 84.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 54649277 + NM_014516 CNOT3 1 1.71 2.01 59 1.43 79.36 23 4.9 No 18 -2.52 No 22 0.93 Yes -22 0.87 Yes 48 82.83 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 54649330 + NM_014516 CNOT3 1 17.91 21.25 72 2.93 72.9 23 5.39 No 71 -5.83 No 22 0.9 Yes -22 0.87 Yes 48 86.43 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 54652107 + NM_014516 CNOT3 1 0.46 0.39 20 6.99 85.47 30 5.88 Yes NA NA NA 0 0 No -30 0.85 Yes 40 77.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 54657680 + NM_014516 CNOT3 1 1.39 1.22 49 9.79 82.69 45 6.86 Yes NA NA NA 29 0.13 Yes -20 0.47 No 41 71.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 54658290 + NM_014516 CNOT3 1 0.21 0.19 10 7.98 76.7 30 6 Yes 17 0.27 No 0 0 No -29 0.86 Yes 41 87.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 54658995 + NM_014516 CNOT3 1 3.75 3.21 69 6.03 76.76 35 6.4 Yes 39 0.78 Yes 34 0.7 Yes -34 0.85 Yes 36 84.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 135080448 - NM_001008225 CNOT4 1 0.13 0.11 7 8.42 83.14 24 4.13 No 65 0.72 No 0 0 No -24 0.45 No 46 56.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 135097634 - NM_001008225 CNOT4 1 1.46 1.08 46 8.49 80.57 56 7.1 Yes 43 1.3 Yes 0 0 No -34 0.58 No 36 71.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 135117464 - NM_001008225 CNOT4 1 0.16 0.15 10 8.83 90.29 44 5.25 No 22 0.41 No 0 0 No -34 0.73 Yes 36 75.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 135169496 - NM_001008225 CNOT4 1 0.33 0.18 11 3.01 0 39 7.41 Yes 26 1.09 Yes 0 0 No -38 0.59 No 32 62.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 135193906 - NM_001008225 CNOT4 1 0.86 0.49 26 12.38 91.3 35 6.4 Yes 47 2.56 Yes 34 0.67 Yes -34 0.8 Yes 36 79.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179967921 + NM_001303241 CNOT6 1 0.27 0.31 18 9.42 82.96 32 5.4 No 0 0.1 No 0 0 No -31 0.91 Yes 39 94.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 179968010 + NM_001303241 CNOT6 1 0.43 0.5 24 11.42 91.99 35 6.71 Yes 22 1.17 Yes 0 0 No -34 0.84 Yes 36 83.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179968159 + NM_001303241 CNOT6 1 0.3 0.33 18 7.67 85.05 27 4.73 No 62 0.51 No 0 0 No -26 0.53 No 44 45.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179981697 + NM_001303241 CNOT6 1 0.34 0.64 31 8.02 83.37 30 5.92 Yes 63 -1.8 No 0 0 No -26 0.54 No 44 68.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179981819 + NM_001303241 CNOT6 1 0.73 1.32 52 -1.45 70.57 49 7 Yes 49 0.75 No 0 0 No -34 0.69 Yes 36 79.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 179987475 + NM_001303241 CNOT6 1 0.29 0.53 27 8.09 82.9 33 6.22 Yes 20 1.05 Yes 0 0 No -32 0.81 Yes 38 82.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179992875 + NM_001303241 CNOT6 1 2.99 3.94 70 2.28 67.22 33 7.08 Yes 20 0.83 Yes 0 0 No -33 0.85 Yes 37 68.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 179996968 + NM_001303241 CNOT6 1 0.2 0.15 9 4.73 84.48 48 7.99 Yes 35 0.94 Yes 0 0 No -47 0.55 No 23 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 78661358 - NM_001286790 CNOT6L 1 0.54 0.17 8 6.53 86.16 24 5.48 No 11 1.2 Yes 0 0 No -23 0.72 Yes 47 77.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 78663474 - NM_001286790 CNOT6L 1 1.55 0.56 25 7.65 78.02 27 5.44 No 31 1.3 Yes 30 0.61 Yes -26 0.59 No 43 53.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 78695867 - NM_001286790 CNOT6L 1 3.27 1.31 51 -0.91 0 29 5.15 No 71 1.14 Yes 24 0.77 Yes -28 0.73 Yes 42 69.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 17101055 - NM_054026 CNOT7 1 0.03 0.13 7 9.01 80.86 29 5.8 Yes 36 -1.6 No 27 0.72 Yes -27 0.66 No 41 70.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 17101132 - NM_054026 CNOT7 1 0.3 1.15 48 6.32 82.68 17 5.1 No 4 1.09 Yes 25 0.69 Yes -25 0.64 No 54 73.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 17103441 - NM_054026 CNOT7 1 1.07 1.39 48 -0.25 65.94 42 7.18 Yes 42 0.61 No 41 0.62 Yes -41 0.89 Yes 29 85.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 154238748 + NM_004779 CNOT8 1 1.02 0.14 9 0.14 57.09 32 4.53 No 13 0.9 Yes 0 0 No -25 0.65 No 30 36.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 154238912 + NM_004779 CNOT8 1 2.35 0.29 16 5.91 72.55 21 7.75 Yes 8 1.29 Yes 20 0.79 Yes -20 0.8 Yes 50 75.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 154239254 + NM_004779 CNOT8 1 0.71 0.11 8 -0.87 0 23 5.83 Yes 10 1.15 Yes 22 0.86 Yes -22 0.71 Yes 48 71.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 154241156 + NM_004779 CNOT8 1 0.95 0.17 10 8.26 88.74 23 7.91 Yes 10 1.01 Yes 0 0 No -22 0.89 Yes 48 94.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 154247251 + NM_004779 CNOT8 1 1.01 1.28 53 8.51 81.89 25 5.37 No 63 0.65 No 24 0.83 Yes -24 0.86 Yes 46 89.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 154251416 + NM_004779 CNOT8 1 0.26 0.19 11 -3.06 61.84 46 8.06 Yes 33 1.48 Yes 0 0 No -45 0.47 No 25 62.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 219437289 + NM_001271634 CNOT9 1 0.85 1.38 47 6.16 79.45 13 6.39 Yes 69 -2.84 No 0 0 No -24 0.82 Yes 46 75.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 219438443 + NM_001271634 CNOT9 1 0.18 0.31 19 7.54 80.14 73 7.35 Yes 30 0.3 No 24 0.78 Yes -24 0.51 No 37 26.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 219438717 + NM_001271634 CNOT9 1 0.71 1.13 45 3.35 0 39 7.38 Yes 26 1.75 Yes 34 0.82 Yes -38 0.61 No 32 76.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 219446076 + NM_001271634 CNOT9 1 0.13 0.38 21 8.01 85.31 34 7.14 Yes 21 0.61 No 0 0 No -30 0.6 No 40 62.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 219447120 + NM_001271634 CNOT9 1 0.61 1.72 54 8.74 87.32 20 5.57 Yes 7 0.3 No 0 0 No -19 0.57 No 48 57.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 219447739 + NM_001271634 CNOT9 1 0.04 0.11 7 3.85 73.74 38 6.44 Yes 49 1.34 Yes 0 0 No -30 0.68 Yes 40 76.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219449339 + NM_001271634 CNOT9 1 0.04 0.18 8 1.63 0 24 7.12 Yes 11 0.49 No 0 0 No -23 0.59 No 47 64.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 219449394 + NM_001271634 CNOT9 1 0.17 0.74 35 3.72 73.95 34 7.21 Yes 66 0.5 No 0 0 No -33 0.64 No 37 74.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 219457356 + NM_001271634 CNOT9 1 0.05 0.17 11 0.55 0 15 4.58 No 75 1.49 Yes 0 0 No -47 0.4 No 23 18.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 219458250 + NM_001271634 CNOT9 1 10.36 30.58 72 10.81 88.22 18 5.38 No 5 1.04 Yes 26 0.72 Yes -26 0.73 Yes 44 77.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40125143 + NM_001330216 CNP 1 0.13 0.18 13 -2.04 0 22 4.01 No 0 0.53 No 0 0 No -24 0.37 No 46 42.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56704896 - NM_014255 CNPY2 1 0.07 0.24 10 3.4 72.49 26 6.16 Yes 13 1.41 Yes 0 0 No -25 0.83 Yes 45 91.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56705180 - NM_014255 CNPY2 1 0.1 0.25 13 3.08 81.58 13 5.29 No 0 0.58 No 21 0.37 Yes -21 0.52 No 49 39.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56705238 - NM_014255 CNPY2 1 0.11 0.33 21 1.64 79.4 25 5.32 No -4 0.81 Yes 24 0.77 Yes -24 0.72 Yes 45 61.4 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 56706670 - NM_014255 CNPY2 1 0.88 2.25 60 9.97 81.48 24 5.02 No 5 1.61 Yes 23 0.89 Yes -23 0.81 Yes 47 92.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56708744 - NM_014255 CNPY2 1 0.14 0.29 18 0.62 0 13 3.99 No 47 2.07 Yes 0 0 No -27 0.73 Yes 43 86.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42897584 + NM_001318842 CNPY3 1 1.36 2.33 60 10.93 88.83 26 5.57 Yes NA NA NA 0 0 No -24 0.82 Yes 46 90.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 42902115 + NM_001318842 CNPY3 1 0.31 0.6 29 5.94 89.84 16 5.33 No 27 2.12 Yes 0 0 No -22 0.63 No 48 77.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 42903635 + NM_001318842 CNPY3 1 0.17 0.54 27 5.33 82.46 25 4.97 No 49 0.69 No 0 0 No -24 0.72 Yes 46 87.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 246757257 + NM_152609 CNST 1 0.33 0.19 11 10.33 87.44 28 5.86 Yes 19 2.05 Yes 0 0 No -27 0.58 No 39 67.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 246776629 + NM_152609 CNST 1 0.39 0.22 12 8.69 91.76 22 6 Yes 62 -5.05 No 0 0 No -21 0.64 No 49 60.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 246781559 + NM_152609 CNST 1 2.97 1.76 53 9.32 87.57 16 6.06 Yes 43 0.28 No 0 0 No -31 0.4 No 50 56.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 246809802 + NM_152609 CNST 1 0.35 0.29 17 3.17 83.14 37 7.8 Yes 24 0.35 No 0 0 No -37 0.54 No 33 68.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 246818627 + NM_152609 CNST 1 0.42 0.17 10 8.88 83.47 56 8.14 Yes 43 1.16 Yes 0 0 No -40 0.73 Yes 30 76.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40837978 + NM_003632 CNTNAP1 1 1.14 0.51 28 0.23 0 28 5.44 No 15 0.9 Yes 0 0 No -27 0.91 Yes 43 87.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40842758 + NM_003632 CNTNAP1 1 0.34 0.21 14 -1.81 74.76 29 5.79 Yes NA NA NA 0 0 No -33 0.47 No 37 71.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 40843170 + NM_003632 CNTNAP1 1 0.49 0.35 18 0.45 79.01 19 4.69 No 47 0.33 No 24 0.64 Yes -34 0.65 No 30 58.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 123857229 + NM_007018 CNTRL 1 0.79 0.32 20 3.57 74.99 23 4.79 No 72 0.5 No 0 0 No -22 0.7 Yes 48 52.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 123860718 + NM_007018 CNTRL 1 0.34 0.32 19 5.47 77.67 25 5.08 No 60 1.2 Yes 0 0 No -24 0.91 Yes 46 91.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123870082 + NM_007018 CNTRL 1 0.59 0.44 25 -5.21 68.12 34 5.36 No 48 1.1 Yes 0 0 No -30 0.3 No 37 36.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123873261 + NM_007018 CNTRL 1 0.16 0.14 10 9.32 92.6 19 5.8 Yes 76 -3.22 No 0 0 No -29 0.6 No 41 64.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123873292 + NM_007018 CNTRL 1 0.3 0.32 19 4.49 82.28 22 5.74 Yes 9 0.42 No 0 0 No -21 0.81 Yes 49 74.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123880698 + NM_007018 CNTRL 1 18.9 10.71 72 2.83 72.53 37 5.82 Yes 35 -3.74 No 0 0 No -23 0.92 Yes 47 85.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123887998 + NM_007018 CNTRL 1 0.41 0.35 17 0.58 0 43 5.92 Yes 15 0.8 Yes 0 0 No -43 0.4 No 27 57.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123888378 + NM_007018 CNTRL 1 0.43 0.35 22 10.9 85.32 30 5.83 Yes 31 0.91 Yes 0 0 No -29 0.83 Yes 41 90.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123898086 + NM_007018 CNTRL 1 0.15 0.13 9 -9.76 70.61 24 4.4 No 2 1.27 Yes 0 0 No -23 0.69 Yes 47 66.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 123906183 + NM_007018 CNTRL 1 3.55 3.1 61 1.57 82.86 22 7.28 Yes 45 0.71 No 0 0 No -25 0.64 No 36 73.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 123907117 + NM_007018 CNTRL 1 0.82 0.68 31 5.34 84.73 36 4.79 No 3 1.12 Yes 18 0.61 Yes -30 0.5 No 40 86.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 123912453 + NM_007018 CNTRL 1 0.35 0.29 17 -1.33 0 10 3.87 No 69 0.86 Yes 0 0 No -35 0.67 Yes 35 54.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 123919735 + NM_007018 CNTRL 1 0.83 0.46 22 4.27 79.15 19 4.54 No 41 -3.77 No 19 0.71 Yes -23 0.68 Yes 47 65.63 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 123920241 + NM_007018 CNTRL 1 0.11 0.11 7 1.51 0 15 4.58 No 68 -5.03 No 21 0.65 Yes -14 0.39 No 56 44.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 123923560 + NM_007018 CNTRL 1 0.6 0.49 26 10.59 91.78 51 8.39 Yes 38 1.15 Yes 24 0.91 Yes -37 0.8 Yes 46 72.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 123923810 + NM_007018 CNTRL 1 2.83 2.03 59 6.03 81.27 48 6.7 Yes 18 0.52 No 0 0 No -30 0.55 No 40 56.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123924334 + NM_007018 CNTRL 1 0.42 0.38 21 -9.7 68.09 26 5.66 Yes 38 0.75 No 0 0 No -25 0.74 Yes 45 73.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123924343 + NM_007018 CNTRL 1 0.27 0.25 14 -25.33 0 19 4.24 No 47 0.75 No 0 0 No -34 0.68 Yes 36 55.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 123927228 + NM_007018 CNTRL 1 0.28 0.28 14 -1.24 0 18 4.12 No 14 1.73 Yes 0 0 No -34 0.69 Yes 48 78.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123929741 + NM_007018 CNTRL 1 0.25 0.22 13 -1.48 71 20 5 No 20 0.9 Yes 33 0.47 Yes -23 0.45 No 50 49.42 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 123933436 + NM_007018 CNTRL 1 7.31 3.21 65 10.02 91.41 28 4.62 No 26 0.88 Yes 0 0 No -27 0.6 No 43 70.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 123933697 + NM_007018 CNTRL 1 0.26 0.13 7 -9.69 0 15 4.24 No 34 -1.27 No 0 0 No -33 0.61 No 37 61.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123935634 + NM_007018 CNTRL 1 5.07 1.99 62 -1.99 0 16 4.58 No 60 -4.98 No 0 0 No -21 0.61 No 50 20.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123935644 + NM_007018 CNTRL 1 0.81 0.32 18 2.4 0 16 4.33 No 3 0.58 No 0 0 No -15 0.71 Yes 55 64.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 123935634 + NM_007018 CNTRL 1 4.91 1.89 56 -1.99 0 16 4.58 No 60 -4.98 No 0 0 No -21 0.61 No 50 20.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123935644 + NM_007018 CNTRL 1 0.43 0.19 11 2.4 0 16 4.33 No 3 0.58 No 0 0 No -15 0.71 Yes 55 64.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 123935948 + NM_007018 CNTRL 1 0.49 0.4 23 -0.5 78.8 30 5.02 No 10 0.57 No 29 0.83 Yes -25 0.93 Yes 45 96.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7838236 + NM_001037144 CNTROB 1 1.84 0.85 37 7.3 81.75 18 4.9 No 5 0.72 No 44 0.08 Yes -17 0.67 Yes 53 88.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7838339 + NM_001037144 CNTROB 1 0.59 0.26 15 5.49 80.42 19 5 No 45 1.91 Yes 0 0 No -57 0.54 No 51 64.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7839555 + NM_001037144 CNTROB 1 3.78 1.31 50 9.13 89.32 16 5.83 Yes 3 1.46 Yes 27 0.76 Yes -27 0.89 Yes 43 92.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7840485 + NM_001037144 CNTROB 1 3.53 1.15 47 -1.82 0 42 6.78 Yes -4 0.07 No 23 0.61 Yes -29 0.48 No 29 89.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 7842896 + NM_001037144 CNTROB 1 0.49 0.15 8 9.35 88.38 14 5.2 No 27 -0.88 No 0 0 No -20 0.88 Yes 50 88.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7846302 + NM_001037144 CNTROB 1 0.76 0.24 12 5.2 85.02 18 6.98 Yes 5 1.23 Yes 0 0 No -30 0.54 No 40 64.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7846305 + NM_001037144 CNTROB 1 0.92 0.28 17 3.79 80.12 21 7.19 Yes 8 1.2 Yes 0 0 No -20 0.73 Yes 50 79.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7850684 + NM_001037144 CNTROB 1 0.63 0.19 9 9.08 82.8 33 5.98 Yes 76 0.81 Yes 0 0 No -30 0.69 Yes 40 76.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7850931 + NM_001037144 CNTROB 1 0.69 0.24 15 7.41 74.07 53 6.8 Yes 70 1.36 Yes 23 0.27 Yes -27 0.78 Yes 43 69.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 43673008 - NR_135580 COA1 1 609.92 27.75 72 10.58 89.13 36 9.48 Yes 35 1.95 Yes 35 0.79 Yes -35 0.89 Yes 35 96.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 43679255 - NR_135580 COA1 1 0.14 0.21 12 0.26 0 16 4.36 No 3 0.93 Yes 0 0 No -15 0.75 Yes 55 43.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 43684970 - NR_135580 COA1 1 0.27 0.49 25 0.19 73.12 24 5 No 37 0.38 No 0 0 No -23 0.9 Yes 47 76.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 43684997 - NR_135580 COA1 1 0.25 0.49 26 -2.05 77.83 23 5.39 No 10 0.4 No 0 0 No -22 0.56 No 47 52.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 43685017 - NR_135580 COA1 1 0.17 0.29 14 -11.93 0 12 3.84 No 38 0.1 No 20 0.59 Yes -24 0.42 No 12 22.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 43686181 - NR_135580 COA1 1 0.24 0.42 23 7.79 84.77 19 4.8 No 6 1.04 Yes 18 0.91 Yes -18 0.88 Yes 52 91.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 43691429 - NR_135580 COA1 1 5.16 0.86 36 7.22 86.16 20 5.32 No 11 1.65 Yes 0 0 No -23 0.7 Yes 47 58.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 43695753 - NR_135580 COA1 1 20.49 2.76 15 9.74 78.78 33 5.72 Yes 20 0.57 No 32 0.74 Yes -32 0.38 No 38 50.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 43696869 - NR_135580 COA1 1 9.18 1.56 42 8.7 89.04 29 7.11 Yes 16 1.38 Yes 28 0.93 Yes -28 0.63 No 42 90.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 43705322 - NR_135580 COA1 1 141.68 26.68 72 1.13 67.76 63 7.39 Yes 50 1.17 Yes 28 0.82 Yes -28 0.56 No 19 52.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 43751049 - NR_135580 COA1 1 4.4 0.86 36 9.52 91.35 44 6.93 Yes 43 0.86 Yes 43 0.22 Yes -43 0.45 No 27 60.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 43765766 - NR_135580 COA1 1 0.87 0.18 9 6.47 84.46 19 8.91 Yes 30 1.16 Yes 0 0 No -23 0.79 Yes 47 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 99219109 - NM_001008215 COA5 1 0.3 0.35 17 4.74 84.41 29 5.92 Yes 35 0.09 No 28 0.81 Yes -24 0.61 No 42 78.78 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 234513204 + NM_001301733 COA6 1 1.2 2.85 64 2.53 82.38 23 4.62 No -2 0.24 No 0 0 No -22 0.93 Yes 48 93.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 234513263 + NM_001301733 COA6 1 0.33 0.88 35 8.18 83.07 28 5.57 Yes 25 1.24 Yes 0 0 No -27 0.65 No 46 77.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 234514775 + NM_001301733 COA6 1 0.11 0.29 17 11.06 95.65 27 6.77 Yes 14 0.85 Yes 0 0 No -26 0.83 Yes 44 82.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40717247 + NM_025233 COASY 1 0.09 0.15 8 1.03 67.58 31 6.48 Yes 18 1.82 Yes 0 0 No -30 0.9 Yes 40 90.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40717247 + NM_025233 COASY 1 1.34 2.22 60 1.03 67.58 31 6.48 Yes 18 1.82 Yes 0 0 No -30 0.9 Yes 40 90.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40717250 + NM_025233 COASY 1 0.07 0.13 7 -3.01 0 9 3.87 No 21 1.82 Yes 0 0 No -33 0.89 Yes 37 90.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40717623 + NM_025233 COASY 1 0.33 0.57 30 7.59 83.37 40 6.78 Yes 27 0.74 No 0 0 No -39 0.83 Yes 31 86.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 31348631 + NM_001347720 COCH 1 0.14 0.17 8 -0.2 76.03 25 3.97 No 12 0.46 No 0 0 No -24 0.52 No 45 43.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 71192625 + NM_018714 COG1 1 9.4 2.61 64 9.24 80.17 31 6.08 Yes 18 1.09 Yes 30 0.79 Yes -30 0.89 Yes 40 90.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 71199162 + NM_018714 COG1 1 0.52 0.25 15 1.04 70.27 30 4.75 No 47 0.14 No 0 0 No -29 0.49 No 41 63.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 71199175 + NM_018714 COG1 1 1 0.46 27 5.71 77.9 20 4.69 No 7 0.94 Yes 0 0 No -19 0.95 Yes 51 93.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 71199802 + NM_018714 COG1 1 0.43 0.17 7 5.03 78.51 18 4.53 No 40 1.21 Yes 0 0 No -52 0.31 No 52 60.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 71201695 + NM_018714 COG1 1 0.42 0.18 11 -9.55 0 48 7.16 Yes 43 1.09 Yes 26 0.66 Yes -33 0.56 No 15 58.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 230807004 + NM_001145036 COG2 1 1.4 1.15 51 6.9 95.02 23 5.11 No 22 0.44 No 0 0 No -22 0.71 Yes 48 71.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 230818667 + NM_001145036 COG2 1 0.18 0.15 8 4.96 70.56 29 4.92 No 39 0.74 No 0 0 No -28 0.49 No 42 80.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 46039575 + NM_031431 COG3 1 3.74 1.85 60 5.92 73.3 37 8.25 Yes 70 0.01 No 0 0 No -36 0.73 Yes 34 84.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 46040651 + NM_031431 COG3 1 3.57 1.79 56 11.91 87.78 41 6.32 Yes 67 0.51 No 40 0.05 Yes -40 0.53 No 34 55.42 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 46054263 + NM_031431 COG3 1 0.65 0.18 10 5.2 0 37 5.82 Yes 67 0.58 No 0 0 No -30 0.66 No 40 54.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46054290 + NM_031431 COG3 1 4.51 1.36 50 7.19 85.62 25 5.06 No 5 -1.22 No 0 0 No -20 0.36 No 53 30.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46054380 + NM_031431 COG3 1 5.84 1.78 60 3.52 69.44 31 5.48 No 68 -2.47 No 0 0 No -20 0.42 No 50 53.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46054384 + NM_031431 COG3 1 2.88 0.89 43 -0.39 0 10 5.8 Yes 72 -2.48 No 0 0 No -24 0.5 No 46 51.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46067555 + NM_031431 COG3 1 0.95 0.39 21 5.29 78.02 23 6.11 Yes 3 0.77 No 0 0 No -22 0.89 Yes 48 72.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 46069016 + NM_031431 COG3 1 0.52 0.33 21 3.52 84.41 50 8.95 Yes 37 1.6 Yes 0 0 No -49 0.86 Yes 21 92.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46069537 + NM_031431 COG3 1 0.43 0.24 17 1.12 0 45 5.62 Yes 26 1.36 Yes 0 0 No -38 0.54 No 37 78.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 46071779 + NM_031431 COG3 1 0.42 0.18 12 3.13 69.33 21 6.78 Yes 69 -2.87 No 0 0 No -20 0.52 No 46 36.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46077381 + NM_031431 COG3 1 0.46 0.18 10 4.31 84.92 30 8.31 Yes 17 1.81 Yes 0 0 No -29 0.6 No 41 67.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 46089835 + NM_031431 COG3 1 0.23 0.14 8 5.68 73.68 26 4.69 No -3 0.78 Yes 0 0 No -25 0.54 No 45 40.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 46092712 + NM_031431 COG3 1 0.15 0.11 7 5.96 75.57 29 5.73 Yes 63 1.09 Yes 0 0 No -28 0.8 Yes 42 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46105285 + NM_031431 COG3 1 0.57 0.24 14 8.66 89.65 46 5.31 No 58 0.68 No 24 0.65 Yes -24 0.56 No 38 66.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 46106144 + NM_031431 COG3 1 0.3 0.1 7 8.12 86.51 27 5.48 No 25 1.45 Yes 26 0.96 Yes -26 0.91 Yes 44 93.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 46107371 + NM_031431 COG3 1 0.66 0.28 16 9.03 92.75 31 4.59 No 18 0.62 No 0 0 No -25 0.79 Yes 45 88.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 70517969 - NM_015386 COG4 1 0.12 0.13 9 7.63 79.96 24 6.32 Yes 69 -3.26 No 0 0 No -23 0.78 Yes 47 53.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 70530283 - NM_015386 COG4 1 1.73 1.81 64 8.8 85.56 39 6.06 Yes 26 -0.24 No 27 0.64 Yes -35 0.49 No 35 49.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 70534993 - NM_015386 COG4 1 0.19 0.29 15 -3.45 71.16 43 7.25 Yes 30 1.26 Yes 0 0 No -38 0.61 No 32 73.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 70542700 - NM_015386 COG4 1 0.12 0.15 9 6.08 87.95 31 6.08 Yes 32 1.05 Yes 23 0.6 Yes -30 0.58 No 40 56.29 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 70546301 - NM_015386 COG4 1 0.59 0.39 24 5.55 79.38 24 5.54 No 43 0.06 No 0 0 No -23 0.79 Yes 47 75.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 70549944 - NM_015386 COG4 1 1.35 2.11 60 5.87 80.32 28 6.74 Yes 46 0.06 No 27 0.81 Yes -27 0.65 No 43 85.42 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 70553631 - NM_015386 COG4 1 0.16 0.13 7 -0.95 0 29 5.74 Yes 16 1.62 Yes 0 0 No -28 0.75 Yes 42 96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 106893522 - NM_006348 COG5 1 0.28 0.19 13 8.5 90.18 42 8.22 Yes 29 1.87 Yes 41 0.69 Yes -35 0.59 No 35 71.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 106903207 - NM_006348 COG5 1 1.05 0.82 36 9.22 97.96 20 5.92 Yes 7 1.48 Yes 0 0 No -19 0.9 Yes 51 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 106914998 - NM_006348 COG5 1 0.18 0.11 8 4.84 74.23 34 6.8 Yes 21 0.8 Yes 0 0 No -33 0.67 Yes 37 70.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 106931624 - NM_006348 COG5 1 0.13 0.11 8 7.13 80.32 25 4.98 No 54 -4.39 No 0 0 No -24 0.63 No 42 62.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 106957269 - NM_006348 COG5 1 0.98 0.76 34 2.12 0 38 6.88 Yes 25 1.07 Yes 0 0 No -37 0.77 Yes 33 76.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 107051510 - NM_006348 COG5 1 0.16 0.11 8 12.55 83 26 8.1 Yes 13 1.73 Yes 0 0 No -25 0.66 No 45 72.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 107100234 - NM_006348 COG5 1 2.2 1.39 51 1.92 0 27 8.11 Yes 34 1.72 Yes 0 0 No -26 0.72 Yes 44 53.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 107124150 - NM_006348 COG5 1 0.18 0.13 7 11.44 88.27 32 5.54 No 23 0.4 No 0 0 No -31 0.64 No 39 72.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 107165724 - NM_006348 COG5 1 0.22 0.14 8 6.82 79.42 38 5.44 No 60 1.91 Yes 0 0 No -26 0.6 No 44 41.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 107167448 - NM_006348 COG5 1 0.6 0.32 17 11.19 97.43 35 4.31 No 39 0.87 Yes 0 0 No -29 0.4 No 41 65.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 40230253 + NM_020751 COG6 1 0.34 0.13 7 6.52 69.25 36 6.4 Yes 57 -2.64 No 26 0.14 Yes -35 0.46 No 35 49.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 40230962 + NM_020751 COG6 1 1.18 0.46 24 2.39 0 19 4.47 No 6 1.67 Yes 18 0.91 Yes -18 0.83 Yes 52 91.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 40253686 + NM_020751 COG6 1 0.14 0.11 8 1.36 0 22 4.39 No 69 1.56 Yes 0 0 No -22 0.7 Yes 49 69.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 40254116 + NM_020751 COG6 1 0.28 0.25 17 3.22 0 18 5 No 5 0.86 Yes 0 0 No -24 0.44 No 46 39.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 40257935 + NM_020751 COG6 1 0.23 0.11 7 10.36 89.91 35 6.51 Yes 53 0.79 Yes 0 0 No -21 0.19 No 20 38.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 40277906 + NM_020751 COG6 1 0.21 0.18 8 6.48 81.81 21 6.54 Yes 8 0.73 No 0 0 No -28 0.59 No 32 59.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 40284486 + NM_020751 COG6 1 0.14 0.11 8 5.44 74.41 38 5.89 Yes 12 1.16 Yes 0 0 No -31 0.86 Yes 39 89.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 40293829 + NM_020751 COG6 1 1.02 0.81 39 9.71 86.66 26 4.18 No 41 0.18 No 0 0 No -25 0.61 No 42 58.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 40306180 + NM_020751 COG6 1 2.44 1.65 52 10.13 96.19 35 6.71 Yes 71 -3.1 No 0 0 No -35 0.68 Yes 35 54.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23403556 - NM_153603 COG7 1 0.6 0.14 7 0.28 72.32 20 5 No 49 0.55 No 19 0.86 Yes -19 0.42 No 51 48.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 23403598 - NM_153603 COG7 1 0.98 0.32 21 2.09 0 20 4.47 No 7 0.6 No 19 0.86 Yes -19 0.95 Yes 51 95.77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 23409674 - NM_153603 COG7 1 0.44 0.11 7 8.47 83.25 32 5.57 Yes 73 -2.06 No 0 0 No -31 0.45 No 46 74.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23428440 - NM_153603 COG7 1 1.58 0.31 19 -11.36 64.21 33 5.92 Yes 20 1.54 Yes 0 0 No -32 0.75 Yes 38 92.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23449872 - NM_153603 COG7 1 0.83 0.31 17 2.98 0 47 7.62 Yes 67 1.05 Yes 0 0 No -46 0.57 No 24 55.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23463862 - NM_153603 COG7 1 0.33 0.14 9 9.52 89.88 51 7.55 Yes 38 0.95 Yes 0 0 No -51 0.85 Yes 19 89.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55022692 - NM_004645 COIL 1 0.24 0.24 15 9.56 94.37 26 5.69 Yes 13 0.95 Yes 0 0 No -25 0.76 Yes 45 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55023869 - NM_004645 COIL 1 0.96 1.04 44 -2.94 0 28 5.36 No 15 0.6 No 0 0 No -27 0.81 Yes 43 76.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 70586239 + NM_001858 COL19A1 1 0.71 0.63 25 8.88 92.41 18 5.96 Yes 57 -3.1 No 0 0 No -29 0.61 No 41 79.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 70592941 + NM_001858 COL19A1 1 0.72 0.69 30 0.87 80.77 23 5.1 No 10 1.34 Yes 0 0 No -22 0.89 Yes 48 94.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 70596854 + NM_001858 COL19A1 1 0.1 0.11 8 8.26 92.69 25 5 No 12 0.77 Yes 0 0 No -24 0.84 Yes 46 94.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 70599786 + NM_001858 COL19A1 1 0.19 0.18 12 2.38 58.82 33 6.78 Yes 57 -3.06 No 26 0.39 Yes -33 0.84 Yes 31 54.46 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 70599809 + NM_001858 COL19A1 1 3.85 3.67 67 7.47 87.18 12 5.66 Yes 72 -2.09 No 26 0.39 Yes -26 0.5 No 44 59.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 70608842 + NM_001858 COL19A1 1 0.58 0.54 29 0.88 72.9 40 9.16 Yes 27 0.65 No 0 0 No -39 0.36 No 31 38.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 70625851 + NM_001858 COL19A1 1 2.5 2.22 57 10.86 88.27 34 8.6 Yes 21 1.88 Yes 0 0 No -28 0.74 Yes 42 78.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 70633602 + NM_001858 COL19A1 1 0.51 0.44 25 8.79 95.77 24 5.48 No NA NA NA 0 0 No -23 0.73 Yes 47 63.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 70645911 + NM_001858 COL19A1 1 0.47 0.21 13 6.38 74.88 21 4.41 No 0 1.5 Yes 0 0 No -20 0.5 No 42 56.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 70651601 + NM_001858 COL19A1 1 0.22 0.11 7 10.75 88.27 33 5.66 Yes 36 0.82 Yes 0 0 No -25 0.86 Yes 45 84.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 70660354 + NM_001858 COL19A1 1 0.36 0.18 12 7.64 84.14 25 7.65 Yes 12 1.37 Yes 0 0 No -24 0.81 Yes 46 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 70683730 + NM_001858 COL19A1 1 1.32 0.54 25 6.69 98.31 24 5.25 No 11 0.39 No 23 0.75 Yes -26 0.84 Yes 44 72.34 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 70749173 + NM_001858 COL19A1 1 16.25 7.46 71 8.94 91.59 17 5.5 No 4 1.59 Yes 0 0 No -28 0.55 No 47 72.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 70749261 + NM_001858 COL19A1 1 9.17 4.25 66 6.48 89.41 12 5.24 No -1 0.65 No 0 0 No -32 0.82 Yes 38 76.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 70763286 + NM_001858 COL19A1 1 0.62 0.29 17 8.59 75.14 31 5.56 Yes -2 0.85 Yes 0 0 No -30 0.76 Yes 40 53.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 70770268 + NM_001858 COL19A1 1 3.12 1.36 49 6.6 87.41 19 5 No 6 0.41 No 0 0 No -18 0.37 No 52 40.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 70770271 + NM_001858 COL19A1 1 0.48 0.19 13 3.95 83.18 22 5.29 No 9 0.38 No 0 0 No -21 0.5 No 49 41.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 70770564 + NM_001858 COL19A1 1 0.33 0.14 8 8.57 72.39 32 6.67 Yes 19 1.39 Yes 0 0 No -31 0.61 No 39 85.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 70772343 + NM_001858 COL19A1 1 1.17 0.57 29 4.78 88.36 21 5 No 8 0.68 No 0 0 No -20 0.7 Yes 50 90.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 70778870 + NM_001858 COL19A1 1 0.37 0.17 9 4.96 77.21 16 5.38 No 3 1.81 Yes 0 0 No -24 0.67 Yes 48 64.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 70785865 + NM_001858 COL19A1 1 0.9 0.32 16 10.09 78.33 30 5.91 Yes 76 0.85 Yes 0 0 No -29 0.59 No 41 52.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 70785904 + NM_001858 COL19A1 1 1.26 0.51 25 5.82 69.81 27 5.33 No 14 0.91 Yes 0 0 No -26 0.84 Yes 44 69.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 70790668 + NM_001858 COL19A1 1 1.02 0.38 23 4.25 71.14 20 5.71 Yes 57 0.97 Yes 0 0 No -19 0.63 No 51 78.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 70794554 + NM_001858 COL19A1 1 6.69 2.39 63 12.33 90.94 28 7.71 Yes 15 1.64 Yes 0 0 No -27 0.92 Yes 43 92.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 70814700 + NM_001858 COL19A1 1 0.36 0.14 9 3.71 84.19 16 5.29 No 3 1.24 Yes 0 0 No -25 0.76 Yes 45 62.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 70832331 + NM_001858 COL19A1 1 1.42 0.24 12 3.22 67.56 46 7.96 Yes 33 0.42 No 0 0 No -39 0.46 No 27 64.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 70854093 + NM_001858 COL19A1 1 1.31 0.4 24 -4.63 69.46 26 6.01 Yes 13 0.77 No 33 0.7 Yes -25 0.96 Yes 45 95.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 70895233 + NM_001858 COL19A1 1 5.15 1.35 48 7.65 77.19 29 5.66 Yes 16 0.16 No 0 0 No -28 0.88 Yes 42 92.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 70912333 + NM_001858 COL19A1 1 6.11 1.25 48 0.18 71.21 30 4.56 No 63 0.53 No 0 0 No -29 0.91 Yes 41 89.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 86203150 - NM_152890 COL24A1 1 3.97 0.71 28 6.65 82.97 25 6.93 Yes 60 1.24 Yes 0 0 No -24 0.88 Yes 46 82.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 86211187 - NM_152890 COL24A1 1 0.52 0.15 10 -3.43 68.77 30 7.39 Yes 29 0.98 Yes 0 0 No -29 0.66 No 41 90.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 86246332 - NM_152890 COL24A1 1 0.54 0.18 12 9.43 91.26 16 5.39 No 45 1.03 Yes 0 0 No -25 0.71 Yes 45 77.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 86249251 - NM_152890 COL24A1 1 0.43 0.14 9 0.43 0 39 4.45 No 71 -3.11 No 28 0.8 Yes -26 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 86372613 - NM_152890 COL24A1 1 3.08 0.5 26 6.57 89.74 29 5.57 Yes 20 1.67 Yes 0 0 No -28 0.84 Yes 42 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 86417152 - NM_152890 COL24A1 1 1.64 0.57 27 8.47 92.66 24 9.51 Yes 11 1.63 Yes 0 0 No -23 0.88 Yes 47 81.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 86426564 - NM_152890 COL24A1 1 3.07 0.9 36 -3.64 77.41 64 8.26 Yes 51 1.95 Yes 26 0.77 Yes -30 0.31 No 40 40.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 86429987 - NM_152890 COL24A1 1 0.52 0.17 10 8.1 83.13 22 6.11 Yes 48 1.73 Yes 0 0 No -21 0.78 Yes 49 73.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 86448436 - NM_152890 COL24A1 1 2.93 1.25 44 7.57 87.61 24 7.05 Yes 11 0.1 No 0 0 No -23 0.54 No 47 45.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 74670896 - NM_001130105 COL4A3BP 1 0.17 0.17 9 12.3 98.83 26 7.61 Yes 13 1.68 Yes 0 0 No -25 0.95 Yes 45 96.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 74674979 - NM_001130105 COL4A3BP 1 0.44 0.35 18 5.76 75.1 27 5.43 No 73 0.87 Yes 0 0 No -26 0.66 Yes 44 77.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 74675000 - NM_001130105 COL4A3BP 1 0.28 0.19 13 8.5 86.65 55 7.55 Yes 52 0.86 Yes 0 0 No -47 0.36 No 47 54.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 74681883 - NM_001130105 COL4A3BP 1 0.27 0.29 14 6.38 78.27 20 5.66 Yes 7 0.45 No 29 0.59 Yes -28 0.71 Yes 42 64.7 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 74696117 - NM_001130105 COL4A3BP 1 0.63 0.96 41 1.1 0 9 3.87 No 29 0.35 No 0 0 No -26 0.78 Yes 44 52.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 74711061 - NM_001130105 COL4A3BP 1 0.59 0.83 36 6.99 87.09 29 7.82 Yes 16 1.67 Yes 0 0 No -28 0.86 Yes 42 89.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 74735254 - NM_001130105 COL4A3BP 1 0.14 0.13 8 8.37 88.98 40 5.98 Yes 16 0.69 No 0 0 No -40 0.65 No 30 86.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 74751593 - NM_001130105 COL4A3BP 1 0.23 0.21 13 5.02 73.8 28 6.78 Yes 15 1.14 Yes 0 0 No -27 0.69 Yes 43 70.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 74754938 - NM_001130105 COL4A3BP 1 0.39 0.28 9 8 86.44 27 5.46 No 41 -1.98 No 0 0 No -24 0.5 No 46 54.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 74788181 - NM_001130105 COL4A3BP 1 0.13 0.11 7 8.13 91.32 27 6.3 Yes 43 1.22 Yes 0 0 No -27 0.54 No 44 42.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 74795864 - NM_001130105 COL4A3BP 1 0.17 0.14 10 10.16 93.61 21 9.41 Yes 48 0.49 No 0 0 No -29 0.59 No 41 60.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 40772074 - NM_001852 COL9A2 1 1.33 0.75 34 8.84 79.28 29 5.74 Yes 16 0.13 No 0 0 No -23 0.51 No 47 54.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 40772247 - NM_001852 COL9A2 1 0.34 0.21 12 10.51 95.07 42 8.52 Yes 29 0.46 No 0 0 No -41 0.62 No 29 59.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 40773512 - NM_001852 COL9A2 1 0.25 0.17 11 6.72 77.38 32 5.74 Yes 76 1.64 Yes 0 0 No -31 0.76 Yes 39 83.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 40776341 - NM_001852 COL9A2 1 0.15 0.1 7 10.2 85.86 27 5.74 Yes 14 0.9 Yes 0 0 No -26 0.95 Yes 44 95.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 40777834 - NM_001852 COL9A2 1 0.6 0.4 22 7.83 86.02 49 6.92 Yes 72 -3.37 No 0 0 No -23 0.69 Yes 29 34.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 17668131 + NM_024656 COLGALT1 1 0.83 0.28 18 8.83 94.29 26 5.66 Yes 13 0.08 No 0 0 No -25 0.45 No 45 61.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17671142 + NM_024656 COLGALT1 1 0.5 0.39 21 3.84 77.97 29 5.65 Yes 54 -3.58 No 18 0.78 Yes -28 0.78 Yes 42 83.32 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17681399 + NM_024656 COLGALT1 1 0.11 0.11 7 5.74 90.11 35 6.52 Yes -1 -1.72 No 0 0 No -34 0.46 No 36 65.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17682674 + NM_024656 COLGALT1 1 0.29 0.28 14 0.29 77.99 74 5.83 Yes 61 1.06 Yes 33 0.72 Yes -29 0.85 Yes 41 66.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 17682678 + NM_024656 COLGALT1 1 1.62 1.46 48 1.76 0 78 5.95 Yes 65 1.05 Yes 33 0.72 Yes -33 0.82 Yes 37 68.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 17690895 + NM_024656 COLGALT1 1 0.36 0.21 14 1.55 72.86 17 6.16 Yes -3 0.48 No 0 0 No -25 0.29 No 54 34.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17691230 + NM_024656 COLGALT1 1 0.15 0.11 7 6.26 79.64 31 6.16 Yes 46 1.95 Yes 0 0 No -30 0.66 No 40 77.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17691277 + NM_024656 COLGALT1 1 0.63 0.42 24 8.17 82.08 17 6.08 Yes 4 1.03 Yes 0 0 No -32 0.52 No 38 71.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17691344 + NM_024656 COLGALT1 1 0.44 0.35 18 4.87 72.68 25 8.12 Yes 12 1.48 Yes 0 0 No -24 0.93 Yes 46 92.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 62172100 + NM_152516 COMMD1 1 0.06 0.11 8 3.69 78.62 44 7.55 Yes 68 -2.31 No 0 0 No -37 0.82 Yes 33 78.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 62239838 + NM_152516 COMMD1 1 0.12 0.15 9 8.54 88.47 54 7.89 Yes 24 1.55 Yes 0 0 No -36 0.36 No 34 56.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 62317814 + NM_152516 COMMD1 1 0.16 0.18 11 11.43 81.74 36 6.23 Yes 40 -1.41 No 0 0 No -28 0.74 Yes 35 45.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 62348063 + NM_152516 COMMD1 1 0.11 0.15 9 10.79 87.44 41 7.21 Yes 28 1.66 Yes 0 0 No -40 0.91 Yes 30 91.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 62357430 + NM_152516 COMMD1 1 0.31 0.42 24 4.8 83.57 28 6.67 Yes 15 1.48 Yes 0 0 No -27 0.79 Yes 43 83.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 62362210 + NM_152516 COMMD1 1 0.31 0.39 23 3.91 80.95 31 5.71 Yes 70 0.61 No 0 0 No -30 0.57 No 40 72.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 115424182 + NM_001308080 COMMD10 1 0.28 0.29 15 7.1 91.11 29 5.38 No 30 0.97 Yes 0 0 No -28 0.56 No 46 33.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 115451801 + NM_001308080 COMMD10 1 0.08 0.11 8 11.03 97.56 22 5.58 Yes 72 0.6 No 0 0 No -27 0.53 No 43 66.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 115469768 + NM_001308080 COMMD10 1 0.11 0.15 9 0.44 0 59 8.12 Yes 46 1.4 Yes 0 0 No -31 0.42 No 39 41.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 115516098 + NM_001308080 COMMD10 1 1.49 1.24 52 9.41 87.83 18 3.98 No 68 1.61 Yes 0 0 No -30 0.45 No 49 58.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 115521575 + NM_001308080 COMMD10 1 0.19 0.18 10 9.01 85.94 22 5.73 Yes 9 1.55 Yes 0 0 No -21 0.68 Yes 49 74.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 115522154 + NM_001308080 COMMD10 1 0.21 0.15 10 10.62 89.36 28 6.16 Yes 46 1.2 Yes 0 0 No -27 0.51 No 43 74.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 115592778 + NM_001308080 COMMD10 1 2.68 2.36 58 10.78 91.22 29 5.93 Yes 23 0.61 No 0 0 No -23 0.58 No 47 72.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 115593701 + NM_001308080 COMMD10 1 0.12 0.11 8 4.35 78.46 34 6.74 Yes 21 1.22 Yes 0 0 No -33 0.65 No 37 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 115596739 + NM_001308080 COMMD10 1 0.65 0.58 29 8.31 83.25 31 7.2 Yes 18 0.66 No 0 0 No -30 0.78 Yes 40 65.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 115602345 + NM_001308080 COMMD10 1 0.86 0.71 35 6.99 91.61 18 5.16 No 66 0.12 No 0 0 No -23 0.85 Yes 47 92.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 115628151 + NM_001308080 COMMD10 1 0.59 0.67 35 -2.74 0 37 7.87 Yes 24 2.56 Yes 32 0.95 Yes -36 0.65 No 34 96.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 149461923 - NR_135149 COMMD2 1 0.22 0.33 18 7.4 93.77 31 5.68 Yes 75 1.07 Yes 0 0 No -31 0.72 Yes 39 75.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 149468170 - NR_135149 COMMD2 1 1.7 2.89 64 8.13 80.72 27 6.35 Yes 35 -2.63 No 26 0.66 Yes -27 0.86 Yes 43 84.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 22607586 + NM_012071 COMMD3 1 0.29 1.17 42 2.68 0 23 4.99 No 47 0.64 No 0 0 No -27 0.6 No 43 57.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 22607636 + NM_012071 COMMD3 1 0.04 0.17 10 2.65 70.38 31 6.69 Yes 18 0.65 No 0 0 No -35 0.59 No 35 69.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 22607853 + NM_012071 COMMD3 1 0.05 0.19 12 4.57 69.14 36 7.12 Yes 65 0.68 No 0 0 No -26 0.28 No 44 63.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 75630916 + NM_001321848 COMMD4 1 0.12 0.25 14 10.31 90.71 24 5.48 No 43 0.91 Yes 23 0.78 Yes -23 0.77 Yes 47 83.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 75631377 + NM_001321848 COMMD4 1 0.68 1.43 53 6.34 86.33 18 4.9 No 71 1.49 Yes 24 0.58 Yes -24 0.58 No 46 69.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 75631548 + NM_001321848 COMMD4 1 0.51 0.74 35 7.52 79.71 33 5.45 No 20 1.02 Yes 0 0 No -32 0.64 No 38 81.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 75632192 + NM_001321848 COMMD4 1 0.34 0.43 22 5.72 82.84 25 3.93 No NA NA NA 0 0 No -24 0.79 Yes 46 81.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 75632195 + NM_001321848 COMMD4 1 0.15 0.21 13 7.79 82.52 28 4.12 No NA NA NA 0 0 No -27 0.82 Yes 43 82.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 76100765 - NM_001287394 COMMD6 1 0.04 0.26 14 2.45 0 14 4.47 No 25 0.74 No 0 0 No -37 0.82 Yes 33 85.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 76101988 - NM_001287394 COMMD6 1 1.06 6.94 71 5.33 77.91 23 6.77 Yes -4 1.82 Yes 22 0.91 Yes -22 0.8 Yes 48 86.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31291725 - NM_001099339 COMMD7 1 0.17 0.21 13 4.74 71.85 36 5.36 No 17 1.23 Yes 0 0 No -29 0.94 Yes 41 93.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 31307450 - NM_001099339 COMMD7 1 0.13 0.13 7 10.19 87.64 33 5.47 No 20 0.95 Yes 0 0 No -26 0.64 No 44 59.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 31315833 - NM_001099339 COMMD7 1 0.17 0.14 8 -13.58 0 12 4.24 No 66 0.3 No 19 0.65 Yes -11 0.57 No 59 27.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 31315950 - NM_001099339 COMMD7 1 933.22 46.69 72 8.82 90.77 26 6.71 Yes 13 1.82 Yes 25 0.86 Yes -25 0.85 Yes 45 89.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31319448 - NM_001099339 COMMD7 1 2.23 0.13 9 9.19 84.86 25 5.57 Yes 12 0.8 Yes 0 0 No -24 0.83 Yes 46 86.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 47458745 - NM_017845 COMMD8 1 0.07 0.17 10 -12.37 0 40 6.24 Yes 27 0.14 No 0 0 No -21 0.37 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 47461117 - NM_017845 COMMD8 1 0.46 0.97 39 10.36 88.96 24 6.1 Yes 2 1.12 Yes 0 0 No -23 0.85 Yes 47 78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19934829 + NM_000754 COMT 1 0.3 0.19 11 9.23 81.71 34 6.16 Yes 72 0.96 Yes 0 0 No -31 0.87 Yes 39 93.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19945462 + NM_000754 COMT 1 0.16 0.11 8 9.14 90.94 37 7.46 Yes 39 0.8 Yes 0 0 No -36 0.65 No 34 91.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 19949755 + NM_000754 COMT 1 1.94 2.01 59 7.45 76.55 37 6.56 Yes 24 1.25 Yes 36 0.63 Yes -36 0.88 Yes 34 82.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 19950080 + NM_000754 COMT 1 0.84 0.79 36 7.43 81.32 29 5.57 Yes NA NA NA 0 0 No -24 0.6 No 46 70.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 19950181 + NM_000754 COMT 1 0.22 0.21 13 1.31 0 15 4.57 No 15 -0.46 No 0 0 No -18 0.76 Yes 43 37.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 19954148 + NM_000754 COMT 1 0.36 0.56 31 4.94 74.24 20 7.12 Yes 69 1.14 Yes 0 0 No -19 0.71 Yes 51 90.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19954686 + NM_000754 COMT 1 0.73 1.21 47 8.25 88.89 53 8 Yes 40 2.09 Yes 35 0.17 Yes -35 0.61 No 18 83.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 19955066 + NM_000754 COMT 1 0.24 0.42 25 10.89 89.77 29 4.17 No 16 0.1 No 0 0 No -28 0.52 No 42 56.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 76994194 - NM_144589 COMTD1 1 2.32 1.08 39 9.2 84.4 32 6.16 Yes 60 0.34 No 0 0 No -31 0.62 No 39 77.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 76995498 - NM_144589 COMTD1 1 0.39 0.15 8 -10 0 28 6.27 Yes 15 0.58 No 23 0.88 Yes -27 0.75 Yes 43 80.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160261254 - NM_004371 COPA 1 0.03 0.1 7 5.35 73.66 19 5.82 Yes -2 0.13 No 0 0 No -28 0.74 Yes 42 66.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 160262351 - NM_004371 COPA 1 0.09 0.42 22 4.65 83.75 14 3.4 No 24 0.67 No 0 0 No -18 0.62 No 52 51.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160264363 - NM_004371 COPA 1 0.03 0.1 7 -5.94 0 13 3.25 No 58 0.17 No 0 0 No -41 0.77 Yes 45 88.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160265672 - NM_004371 COPA 1 0.05 0.25 16 5.31 83.06 26 5 No 27 1.17 Yes 24 0.84 Yes -25 0.69 Yes 45 84.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160265956 - NM_004371 COPA 1 0.03 0.17 8 -0.63 65.48 40 6.4 Yes 64 -2.08 No 22 0.68 Yes -27 0.75 Yes 39 39.94 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 160268722 - NM_004371 COPA 1 0.12 0.49 29 7.73 89.79 16 5.47 No 33 -1.24 No 0 0 No -23 0.32 No 48 60.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160269103 - NM_004371 COPA 1 0.05 0.21 14 11.07 92.17 24 5.48 No 63 0.41 No 28 0.45 Yes -23 0.74 Yes 47 73.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160275389 - NM_004371 COPA 1 4.69 19.04 72 6.61 77.08 15 5.9 Yes 52 0.98 Yes 23 0.67 Yes -23 0.36 No 43 37.85 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 160293342 - NM_004371 COPA 1 0.1 0.49 22 -1.24 0 19 4.22 No 6 0.29 No 23 0.86 Yes -18 0.61 No 57 53.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 160305131 - NM_004371 COPA 1 0.04 0.14 8 7.52 81.15 19 5.89 Yes 6 1.4 Yes 20 0.67 Yes -22 0.87 Yes 48 84.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160308303 - NM_004371 COPA 1 0.05 0.18 11 7.12 81.61 32 6.93 Yes 19 0.26 No 0 0 No -27 0.31 No 43 38.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 14488724 - NM_001144061 COPB1 1 0.2 0.96 48 9.59 81.81 36 7.75 Yes 43 0.24 No 0 0 No -35 0.67 Yes 35 60.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 14490403 - NM_001144061 COPB1 1 0.03 0.14 7 -7.46 0 35 5.99 Yes 43 0.55 No 0 0 No -34 0.82 Yes 36 62.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 14498568 - NM_001144061 COPB1 1 0.02 0.1 7 -7.32 0 21 4.45 No 49 0.14 No 26 0.64 Yes -20 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 14498579 - NM_001144061 COPB1 1 0.11 0.43 23 5.88 0 15 4.56 No 74 0.61 No 26 0.64 Yes -50 0.75 Yes 41 47.64 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 14498764 - NM_001144061 COPB1 1 0.05 0.18 13 5.12 85.02 19 7.07 Yes 6 1.26 Yes 0 0 No -18 0.67 Yes 52 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 14500264 - NM_001144061 COPB1 1 0.04 0.15 8 3.82 82.41 17 7.01 Yes 4 1.42 Yes 0 0 No -16 0.56 No 54 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 14502434 - NM_001144061 COPB1 1 0.03 0.14 8 0.76 81.37 21 5.19 No 37 1.59 Yes 0 0 No -21 0.48 No 21 62.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 14503857 - NM_001144061 COPB1 1 0.03 0.14 8 3.5 71.69 33 4.46 No 47 0.12 No 0 0 No -29 0.5 No 41 40.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 14515867 - NM_001144061 COPB1 1 0.09 0.25 17 9.42 91.13 31 7.12 Yes 18 1.3 Yes 0 0 No -30 0.62 No 40 70.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 14516274 - NM_001144061 COPB1 1 0.12 0.29 17 4.91 69.92 50 7.05 Yes 58 0.12 No 0 0 No -27 0.39 No 33 58.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 139076799 - NM_004766 COPB2 1 0.04 0.15 10 -4.74 76.86 28 6.31 Yes 12 1.13 Yes 24 0.67 Yes -28 0.7 Yes 42 71.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 139077947 - NM_004766 COPB2 1 0.04 0.15 8 5.38 76.55 10 5.48 No -3 1.47 Yes 0 0 No -26 0.84 Yes 44 68.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 139087065 - NM_004766 COPB2 1 0.09 0.31 18 3.77 80.85 24 5.41 No 11 0.39 No 0 0 No -27 0.52 No 43 74.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 139087170 - NM_004766 COPB2 1 0.03 0.13 7 3.79 80.71 13 5.2 No 67 0.31 No 28 0.48 Yes -26 0.5 No 50 63.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 139092645 - NM_004766 COPB2 1 0.05 0.24 14 -1.35 0 9 3.87 No 52 1.24 Yes 0 0 No -22 0.52 No 48 89.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 139095885 - NM_004766 COPB2 1 0.09 0.36 20 5.87 89.69 46 6.51 Yes 33 0.84 Yes 0 0 No -30 0.7 Yes 40 51.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 139096946 - NM_004766 COPB2 1 0.08 0.4 24 4.68 82.66 27 5.66 Yes 71 0.36 No 0 0 No -26 0.63 No 44 53.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 139098341 - NM_004766 COPB2 1 0.09 0.21 11 7.7 85.24 33 5.66 Yes 20 0.04 No 29 0.89 Yes -32 0.48 No 38 77.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 139098750 - NM_004766 COPB2 1 0.21 0.43 23 7.42 83.4 26 5.98 Yes 57 0.31 No 29 0.68 Yes -29 0.71 Yes 42 85.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 139104043 - NM_004766 COPB2 1 6.85 16.54 72 -3.24 46.48 43 8.35 Yes 30 1.21 Yes 34 0.3 Yes -42 0.61 No 28 71.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 139104272 - NM_004766 COPB2 1 0.19 0.4 22 6.21 79.7 25 6.15 Yes 47 0.25 No 24 0.75 Yes -24 0.93 Yes 46 89.09 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19010519 - NM_199442 COPE 1 2.61 19.13 72 -2.84 74.92 21 4.8 No 8 -0.52 No 29 0.45 Yes -20 0.8 Yes 50 76.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19010533 - NM_199442 COPE 1 0.07 0.53 28 -12.84 67.03 83 10 Yes 70 1.63 Yes 29 0.45 Yes -32 0.42 No 25 45.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 19010816 - NM_199442 COPE 1 0.14 1.11 45 5.54 84.78 26 7.54 Yes 13 1.45 Yes 25 0.95 Yes -25 0.93 Yes 45 92.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19010819 - NM_199442 COPE 1 0.07 0.54 31 4.23 78.13 23 7.33 Yes 10 1.45 Yes 25 0.95 Yes -22 0.9 Yes 48 92.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19011254 - NM_199442 COPE 1 0.02 0.11 7 2.01 0 39 7.28 Yes 26 2.39 Yes 0 0 No -38 0.83 Yes 32 88.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19014191 - NM_199442 COPE 1 0.09 0.51 25 -11.12 69.41 18 5.74 Yes 50 0.79 Yes 0 0 No -26 0.82 Yes 44 60.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 19014194 - NM_199442 COPE 1 0.41 2.5 64 5.84 86.59 15 5.48 No 47 0.79 Yes 0 0 No -23 0.84 Yes 47 64.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 19014221 - NM_199442 COPE 1 0.06 0.33 20 -6.6 0 20 4.14 No 20 0.78 Yes 0 0 No -32 0.88 Yes 38 51.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 19015658 - NM_199442 COPE 1 0.03 0.17 9 -1.84 0 34 6.12 Yes 21 1.36 Yes 0 0 No -33 0.93 Yes 37 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19017819 - NM_199442 COPE 1 0.94 0.14 8 5.16 74.76 52 7.63 Yes 18 1.28 Yes 0 0 No -30 0.95 Yes 40 96.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19017916 - NM_199442 COPE 1 4.16 0.5 29 -1.35 0 10 3.87 No 12 0.39 No 0 0 No -24 0.77 Yes 46 85.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19017922 - NM_199442 COPE 1 4679.63 579.24 72 9.1 94.68 19 5 No 6 0.39 No 18 0.29 Yes -18 0.73 Yes 52 85.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19017922 - NM_199442 COPE 1 3.93 0.64 33 9.1 94.68 19 5 No 6 0.39 No 18 0.29 Yes -18 0.73 Yes 52 85.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19020849 - NM_199442 COPE 1 0.72 0.11 8 5.52 73.62 25 6.3 Yes 49 1.08 Yes 0 0 No -25 0.54 No 45 61.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19021904 - NM_199442 COPE 1 0.05 0.25 15 0.76 62.68 36 6.4 Yes 23 -1.98 No 0 0 No -35 0.47 No 40 46.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19022026 - NM_199442 COPE 1 0.03 0.15 8 6.31 76.3 22 4.58 No 9 0.97 Yes 0 0 No -31 0.65 No 49 63.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 128984836 + NM_016128 COPG1 1 0.09 0.32 21 3.46 84.41 39 6.48 Yes 26 0.69 No 0 0 No -38 0.58 No 32 61.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 128986608 + NM_016128 COPG1 1 0.05 0.21 11 4.85 76.99 28 4.94 No 9 0.17 No 0 0 No -27 0.67 Yes 37 46.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 128986712 + NM_016128 COPG1 1 0.03 0.11 7 1.7 68.13 14 5.23 No 59 1.64 Yes 0 0 No -39 0.54 No 32 63.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 128986781 + NM_016128 COPG1 1 0.04 0.17 10 -19.01 0 29 5.87 Yes 63 0.67 No 0 0 No -25 0.7 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 128987311 + NM_016128 COPG1 1 0.08 0.29 16 7.39 86.05 39 7.34 Yes 73 -3.45 No 24 0.58 Yes -21 0.73 Yes 49 87.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 128990614 + NM_016128 COPG1 1 0.28 0.89 42 -1.76 0 31 4.38 No 70 0.09 No 0 0 No -30 0.75 Yes 40 78.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 128991589 + NM_016128 COPG1 1 0.11 0.29 15 10.9 92.99 26 6.32 Yes 13 1.82 Yes 0 0 No -25 0.91 Yes 45 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 128995157 + NM_016128 COPG1 1 0.04 0.11 7 10.12 96.92 38 7.06 Yes 25 1.69 Yes 0 0 No -25 0.78 Yes 45 81.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 130327577 - NM_012133 COPG2 1 1.43 0.88 36 10.47 87.74 39 4.15 No 26 0.94 Yes 0 0 No -25 0.74 Yes 45 91.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 130331348 - NM_012133 COPG2 1 0.78 0.49 28 5.75 79.12 31 6.7 Yes 18 1.44 Yes 0 0 No -30 0.72 Yes 40 86.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 49420971 - NM_004236 COPS2 1 0.13 0.44 22 -2.93 57.9 37 4.3 No 67 -6.05 No 18 0.8 Yes -25 0.46 No 45 37.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 49429620 - NM_004236 COPS2 1 0.34 0.92 42 4.27 85.82 23 4.64 No 17 1.07 Yes 0 0 No -22 0.76 Yes 27 57.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 49429656 - NM_004236 COPS2 1 55.58 145.31 72 6.76 75.05 32 6 Yes 28 0.95 Yes 0 0 No -31 0.92 Yes 39 92.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 49429656 - NM_004236 COPS2 1 0.11 0.26 16 6.76 75.05 32 6 Yes 28 0.95 Yes 0 0 No -31 0.92 Yes 39 92.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 49429683 - NM_004236 COPS2 1 0.16 0.49 21 6.48 84.32 14 5.54 No 1 0.95 Yes 0 0 No -28 0.51 No 42 63.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 49431288 - NM_004236 COPS2 1 0.67 1.78 52 7.14 81.76 30 5.34 No 75 0.06 No 0 0 No -29 0.78 Yes 41 90.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17150464 - NM_001316358 COPS3 1 0.11 0.31 19 -10.8 71.55 23 6.64 Yes 10 0.76 No 0 0 No -25 0.46 No 45 60.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 17165007 - NM_001316358 COPS3 1 2.29 8.39 71 10.7 86.43 28 4.56 No 15 1.05 Yes 27 0.81 Yes -28 0.55 No 43 61.09 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 17165443 - NM_001316358 COPS3 1 0.23 0.69 38 9.19 91.21 55 7.49 Yes 24 0.74 No 26 0.82 Yes -36 0.71 Yes 47 73.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17179479 - NM_001316358 COPS3 1 2059.28 221.22 72 11.18 94.93 24 5.29 No 18 0.1 No 24 0.7 Yes -24 0.82 Yes 46 69.44 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 17183245 - NM_001316358 COPS3 1 7.57 0.82 33 8.15 89.13 24 5.52 No 11 0.74 No 0 0 No -23 0.78 Yes 47 89.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 83957108 + NM_001330727 COPS4 1 0.08 0.13 9 4.34 65.86 23 6.16 Yes 10 0.62 No 0 0 No -22 0.88 Yes 48 71.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 83984233 + NM_001330727 COPS4 1 0.08 0.11 8 -0.25 0 21 5.57 Yes 8 0.97 Yes 0 0 No -26 0.51 No 50 64.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 83986212 + NM_001330727 COPS4 1 1.96 3.58 70 7.06 80.84 21 7.21 Yes 8 1.23 Yes 20 0.73 Yes -20 0.84 Yes 50 93.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 67958221 - NM_006837 COPS5 1 0.1 0.33 17 3.59 88.94 24 4.86 No 39 -1.87 No 23 0.84 Yes -23 0.7 Yes 47 64.79 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 67960095 - NM_006837 COPS5 1 2.58 8.29 72 8.15 82.91 28 5.78 Yes 15 1.15 Yes 27 0.84 Yes -27 0.84 Yes 43 79.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 67961692 - NM_006837 COPS5 1 0.09 0.29 19 4.67 0 36 6.39 Yes 36 0.84 Yes 0 0 No -36 0.55 No 38 59.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 67973658 - NM_006837 COPS5 1 0.23 0.44 22 9.58 87 31 6.07 Yes 18 0.74 No 26 0.64 Yes -26 0.56 No 44 71.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 99686915 + NM_006833 COPS6 1 1.34 3.39 68 4.04 71.93 32 7.75 Yes 19 2.21 Yes 28 0.96 Yes -31 0.97 Yes 39 96.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 99688503 + NM_006833 COPS6 1 0.05 0.14 9 -0.68 0 11 3.11 No 70 1 Yes 23 0.82 Yes -32 0.43 No 38 49.48 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 6834813 + NM_001164093 COPS7A 1 0.42 0.42 25 5.81 90.86 25 5.2 No 71 0.19 No 24 0.96 Yes -24 0.79 Yes 46 93.09 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6836836 + NM_001164093 COPS7A 1 0.39 0.39 20 7.11 70.39 37 5.81 Yes 11 0.92 Yes 23 0.85 Yes -23 0.72 Yes 47 70.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6838466 + NM_001164093 COPS7A 1 1.11 1.61 53 5.43 67.58 12 6 Yes -1 0.18 No 0 0 No -29 0.79 Yes 41 74.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6838526 + NM_001164093 COPS7A 1 0.27 0.4 18 4 70.9 27 6.92 Yes 14 0.29 No 0 0 No -26 0.78 Yes 44 88.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 232655462 + NM_001308381 COPS7B 1 0.18 0.13 9 3.97 84.41 40 5.59 Yes 10 0.9 Yes 0 0 No -22 0.91 Yes 48 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 232655631 + NM_001308381 COPS7B 1 0.82 0.67 30 5.2 85.02 18 7 Yes 5 1.23 Yes 31 0.24 Yes -17 0.71 Yes 53 84.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 232656763 + NM_001308381 COPS7B 1 0.21 0.22 11 9.87 94.39 26 5.2 No 63 1.74 Yes 20 0.42 Yes -20 0.43 No 44 39.93 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 232660914 + NM_001308381 COPS7B 1 0.13 0.14 9 4.57 80.46 12 3.97 No -1 0.88 Yes 0 0 No -26 0.84 Yes 40 66.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 238002305 + NM_198189 COPS8 1 0.19 0.57 27 8.97 87.13 26 5.39 No -4 0.81 Yes 25 0.82 Yes -23 0.81 Yes 47 83.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 238004473 + NM_198189 COPS8 1 0.05 0.11 8 -3.63 0 12 4.24 No 11 0.65 No 21 0.45 Yes -30 0.87 Yes 40 91.5 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 238005470 + NM_198189 COPS8 1 0.04 0.1 7 2 0 14 3.87 No 69 0.31 No 0 0 No -33 0.77 Yes 37 63.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 241073422 - NM_001163424 COPS9 1 0.05 0.15 7 -1.92 0 29 8.43 Yes 16 1.27 Yes 0 0 No -28 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 54740395 + NM_001271736 COPZ1 1 0.21 1.06 45 10.75 82.73 32 5.66 Yes 19 1.35 Yes 31 0.76 Yes -31 0.82 Yes 39 67.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 54744029 + NM_001271736 COPZ1 1 0.04 0.18 10 9.95 95.61 30 6.32 Yes 17 2.08 Yes 29 0.85 Yes -30 0.59 No 41 68.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 84188362 - NM_015697 COQ2 1 2.95 2.19 58 8.65 86.87 21 7.21 Yes 8 1.31 Yes 20 0.85 Yes -20 0.87 Yes 50 91.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 84193321 - NM_015697 COQ2 1 1.6 1.36 49 4.82 0 35 5.2 No 13 0.91 Yes 0 0 No -34 0.54 No 36 39.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 99819391 - NM_017421 COQ3 1 0.34 0.21 9 7.19 88.71 33 8.11 Yes 43 -1.27 No 0 0 No -24 0.65 No 46 43.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99824077 - NM_017421 COQ3 1 0.36 0.21 12 -2.55 0 11 4.12 No 21 1.75 Yes 22 0.93 Yes -33 0.84 Yes 37 92.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 99824085 - NM_017421 COQ3 1 0.51 0.24 14 -1.9 83.86 26 6.85 Yes 13 1.76 Yes 22 0.93 Yes -25 0.82 Yes 45 93.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 99830065 - NM_017421 COQ3 1 0.69 0.29 13 10.17 92.56 29 6.59 Yes 71 1.52 Yes 0 0 No -26 0.62 No 44 58.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 99831007 - NM_017421 COQ3 1 9.68 4.06 69 4.35 82.2 38 7 Yes 25 0.86 Yes 30 0.71 Yes -37 0.72 Yes 33 85.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 131085561 + NM_016035 COQ4 1 15 7.74 72 1.57 72.05 29 6.56 Yes 65 -3.69 No 28 0.82 Yes -28 0.91 Yes 42 84.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 131088590 + NM_016035 COQ4 1 0.72 0.5 25 8.2 92.98 29 6.79 Yes 16 0.16 No 0 0 No -28 0.84 Yes 42 94.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131094444 + NM_016035 COQ4 1 0.18 0.14 9 -1.59 0 16 4.47 No 71 -5.77 No 0 0 No -24 0.34 No 46 78.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 120941685 - NM_032314 COQ5 1 0.35 0.39 22 -1.64 0 27 4.92 No 36 0.63 No 0 0 No -26 0.92 Yes 44 92.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 120942778 - NM_032314 COQ5 1 0.11 0.13 8 -1.51 0 12 4.24 No 70 0.76 No 0 0 No -43 0.83 Yes 27 78.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 120964350 - NM_032314 COQ5 1 1.38 0.83 38 0.81 61.05 45 8.09 Yes 32 1.42 Yes 22 0.74 Yes -44 0.57 No 26 78.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 120965182 - NM_032314 COQ5 1 0.37 0.21 11 4.31 87.09 21 4.43 No 8 0.55 No 20 0.82 Yes -20 0.64 No 50 76.91 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 74423131 + NM_182476 COQ6 1 0.83 0.33 18 5.56 88.27 23 6.55 Yes 65 1.2 Yes 30 0.71 Yes -22 0.45 No 48 48.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 227128209 + NM_020247 COQ8A 1 0.75 0.18 12 6.22 81.67 31 5.55 No 18 0.94 Yes 0 0 No -30 0.9 Yes 40 91.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 227153348 + NM_020247 COQ8A 1 0.38 0.17 11 8.67 81.13 35 6.32 Yes 22 0.62 No 27 0.77 Yes -34 0.9 Yes 36 80.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 227162542 + NM_020247 COQ8A 1 0.32 0.14 8 5.76 87.43 47 7.28 Yes 34 0.77 Yes 20 0.73 Yes -31 0.59 No 39 55.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 227174237 + NM_020247 COQ8A 1 0.38 0.22 13 6.04 81 27 5.46 No 14 1.24 Yes 0 0 No -26 0.93 Yes 44 93.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 41206353 - NM_001142555 COQ8B 1 0.62 0.21 12 4.23 0 37 6.48 Yes 31 0.94 Yes 0 0 No -26 0.47 No 31 63.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 41220059 - NM_001142555 COQ8B 1 0.29 0.14 7 8.64 85.07 17 5.41 No 58 -0.69 No 25 0.51 Yes -36 0.37 No 45 56.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57490493 + NM_020312 COQ9 1 0.21 0.14 9 3.98 78.97 22 5.73 Yes 9 0.93 Yes 0 0 No -21 0.84 Yes 49 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57491414 + NM_020312 COQ9 1 0.12 0.18 11 8.29 76.42 28 5.74 Yes 15 1.29 Yes 0 0 No -27 0.84 Yes 43 84.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57493883 + NM_020312 COQ9 1 0.09 0.13 7 6.58 76.68 38 6.93 Yes 25 1.61 Yes 0 0 No -37 0.68 Yes 33 81.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57493937 + NM_020312 COQ9 1 0.28 0.35 19 4.03 68.42 22 5.73 Yes 34 1.17 Yes 27 0.87 Yes -28 0.76 Yes 42 87.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30198708 + NM_001193333 CORO1A 1 0.02 0.29 20 -5.61 0 15 2.76 No 19 2.32 Yes 0 0 No -31 0.85 Yes 39 81.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30199048 + NM_001193333 CORO1A 1 0.28 5.32 71 0.45 66.87 18 6.22 Yes 5 1.68 Yes 0 0 No -24 0.69 Yes 46 80.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30199696 + NM_001193333 CORO1A 1 0.01 0.28 15 4.22 80.14 20 4.9 No 26 1.18 Yes 0 0 No -38 0.35 No 32 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 67208308 - NM_001018070 CORO1B 1 0.37 0.17 11 7.42 81.92 54 7.42 Yes 47 0.38 No 20 0.48 Yes -53 0.46 No 17 63.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 109046837 - NM_014325 CORO1C 1 0.48 2.5 61 6.1 84.73 29 7.73 Yes 50 0.34 No 28 0.92 Yes -28 0.94 Yes 42 95.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 109046958 - NM_014325 CORO1C 1 0.92 4.88 70 9.64 79.59 30 5.36 No 24 0.41 No 0 0 No -22 0.7 Yes 48 70.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 109048185 - NM_014325 CORO1C 1 0.02 0.11 7 -10.34 0 77 7.77 Yes 40 -2.86 No 0 0 No -24 0.44 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 109048186 - NM_014325 CORO1C 1 0.03 0.14 8 -12.31 0 76 7.72 Yes 39 -2.86 No 0 0 No -23 0.4 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 109051476 - NM_014325 CORO1C 1 0.05 0.25 16 9.03 91.04 20 5.82 Yes 60 1.46 Yes 0 0 No -30 0.69 Yes 51 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 109111539 - NM_014325 CORO1C 1 0.2 0.51 26 9.48 92.27 33 6.09 Yes 42 0.17 No 0 0 No -32 0.48 No 38 64.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 109112678 - NM_014325 CORO1C 1 0.05 0.14 9 6.21 82.99 26 6.48 Yes 13 0.12 No 0 0 No -25 0.82 Yes 45 60.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 4390392 - NM_001201479 CORO7-PAM16 1 0.08 0.1 7 -1.07 69.54 25 4.9 No 19 -2.32 No 0 0 No -20 0.62 No 36 27.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 4391585 - NM_001201479 CORO7-PAM16 1 1.42 1.35 56 4.76 79.66 38 6.51 Yes 64 -1.17 No 18 0.67 Yes -41 0.63 No 30 80.61 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 4391656 - NM_001201479 CORO7-PAM16 1 0.18 0.13 8 3.61 69.48 21 5.19 No 16 1.41 Yes 0 0 No -44 0.63 No 26 76.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 4391674 - NM_001201479 CORO7-PAM16 1 5.45 5.76 71 6.87 81.97 27 5.74 Yes -2 1.33 Yes 0 0 No -26 0.83 Yes 44 86.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4406258 - NM_001201479 CORO7-PAM16 1 0.27 0.19 11 5.08 79.14 40 7.03 Yes 27 0.57 No 0 0 No -24 0.79 Yes 46 71.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4409071 - NM_001201479 CORO7-PAM16 1 1.51 1.25 47 4.77 70.64 27 5.93 Yes 42 -4.82 No 0 0 No -26 0.81 Yes 44 77.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4409642 - NM_001201479 CORO7-PAM16 1 0.36 0.28 17 0.79 72.16 16 5.37 No 3 1.08 Yes 28 0.54 Yes -22 0.9 Yes 48 89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4411805 - NM_001201479 CORO7-PAM16 1 1.6 0.65 36 10.18 85.59 16 6.57 Yes 40 1 Yes 0 0 No -23 0.48 No 49 52.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 4439278 - NM_001201479 CORO7-PAM16 1 0.22 0.18 12 9.65 88.9 20 5.09 No 56 1.13 Yes 0 0 No -24 0.54 No 46 56.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 4440448 - NM_001201479 CORO7-PAM16 1 0.18 0.15 11 8.02 83.42 26 5.2 No 46 1.72 Yes 0 0 No -25 0.86 Yes 45 86.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4447452 - NM_001201479 CORO7-PAM16 1 0.33 0.33 18 9.81 87.64 28 5.39 No 42 -1.71 No 27 0.52 Yes -22 0.76 Yes 48 84.22 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 84649400 - NM_021149 COTL1 1 0.02 0.11 8 7.01 78.98 22 5.87 Yes 9 0.69 No 0 0 No -21 0.73 Yes 49 73.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 84650372 - NM_021149 COTL1 1 0.02 0.13 9 6.22 81.9 19 3.85 No 29 -1.53 No 0 0 No -24 0.45 No 52 77.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 14004651 + NM_001303 COX10 1 0.36 0.29 17 10.05 81.37 39 9.95 Yes 26 2.45 Yes 0 0 No -38 0.75 Yes 32 93.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 14012680 + NM_001303 COX10 1 0.38 0.36 18 8.82 88.08 33 5.72 Yes 13 0.81 Yes 0 0 No -25 0.48 No 38 37.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 14028429 + NM_001303 COX10 1 0.16 0.13 8 6.76 84.18 36 5.91 Yes 16 0.48 No 0 0 No -22 0.72 Yes 48 68.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 14085337 + NM_001303 COX10 1 7.34 4.57 68 11.88 100 34 6.76 Yes 21 0.3 No 0 0 No -33 0.96 Yes 37 96.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 13945296 - NR_049718 COX10-AS1 1 2.75 0.54 30 4.18 0 25 6.16 Yes 12 1.12 Yes 0 0 No -24 0.64 No 46 63.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 53038509 - NR_135677 COX11 1 0.11 0.15 8 3.61 71.91 24 6.18 Yes 11 1.37 Yes 31 0.49 Yes -26 0.44 No 44 56.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 53038674 - NR_135677 COX11 1 11.32 13.6 72 5.08 92.31 22 4.75 No 51 0.43 No 24 0.69 Yes -26 0.77 Yes 44 82.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 53038688 - NR_135677 COX11 1 3.63 4.33 69 3.27 70.18 41 5.08 No 37 0.42 No 24 0.69 Yes -24 0.51 No 46 53.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 53043021 - NR_135677 COX11 1 0.49 0.74 32 7.43 83.01 22 7.18 Yes 9 1.28 Yes 0 0 No -21 0.89 Yes 49 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 53043291 - NR_135677 COX11 1 0.1 0.15 9 8.89 85.17 29 6.4 Yes 16 0.91 Yes 0 0 No -28 0.88 Yes 42 86.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101476237 - NM_001320974 COX15 1 0.93 1.39 55 5.03 66.31 36 6.03 Yes -3 0.61 No 22 0.87 Yes -29 0.37 No 35 35.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 101478507 - NM_001320974 COX15 1 0.09 0.13 8 5.98 74.43 32 5.9 Yes 19 0.85 Yes 0 0 No -31 0.87 Yes 39 88.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101479127 - NM_001320974 COX15 1 0.12 0.19 11 3.74 76.93 21 6.37 Yes 8 0.65 No 0 0 No -29 0.79 Yes 41 62.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 101486002 - NM_001320974 COX15 1 0.16 0.22 15 8.68 85.65 16 6.92 Yes 3 1.69 Yes 0 0 No -27 0.48 No 37 60.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 101486829 - NM_001320974 COX15 1 2.09 3.67 70 7.03 75.99 27 6.32 Yes 14 0.48 No 0 0 No -26 0.97 Yes 44 97.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 70793166 - NM_016468 COX16 1 0.02 0.14 9 -14.07 0 35 7.4 Yes 22 1.41 Yes 0 0 No -28 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 70795001 - NM_016468 COX16 1 0.36 2.13 56 8.74 89.53 32 6.43 Yes 10 0.76 No 0 0 No -31 0.63 No 39 81.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 70799377 - NM_016468 COX16 1 0.09 0.46 22 4.83 86.49 12 5.1 No 71 1.21 Yes 0 0 No -30 0.9 Yes 40 78.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 70799377 - NM_016468 COX16 1 0.02 0.11 7 4.83 86.49 12 5.1 No 71 1.21 Yes 0 0 No -30 0.9 Yes 40 78.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 70799415 - NM_016468 COX16 1 0.09 0.46 24 6 83.24 20 5.1 No 33 1.22 Yes 0 0 No -45 0.47 No 51 41.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 70799415 - NM_016468 COX16 1 0.06 0.29 18 6 83.24 20 5.1 No 33 1.22 Yes 0 0 No -45 0.47 No 51 41.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 70805663 - NM_016468 COX16 1 0.03 0.14 9 -1.09 61.33 29 4.82 No 16 1.17 Yes 0 0 No -32 0.6 No 38 72.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 70819970 - NM_016468 COX16 1 2.03 6.74 56 9.04 94.37 44 6.86 Yes 31 1.26 Yes 0 0 No -43 0.88 Yes 27 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119393636 - NM_005694 COX17 1 1.4 7.31 72 4.19 0 31 6.39 Yes 18 1.13 Yes 34 0.67 Yes -34 0.48 No 36 73.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 119393640 - NM_005694 COX17 1 0.19 0.97 42 2.3 84.41 27 6.07 Yes 14 1.15 Yes 34 0.67 Yes -30 0.48 No 40 76.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 119395814 - NM_005694 COX17 1 1.11 8.69 69 5.77 77.65 18 5.36 No 5 -1.38 No 22 0.44 Yes -22 0.62 No 48 64.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 73925400 - NM_001297733 COX18 1 0.38 0.29 15 8.16 77.47 53 7.12 Yes 40 0.98 Yes 0 0 No -23 0.47 No 38 65.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 73930603 - NM_001297733 COX18 1 2.21 1.04 44 4.81 97.92 20 4.8 No 64 0.24 No 0 0 No -19 0.75 Yes 51 64.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 73930620 - NM_001297733 COX18 1 41.54 21.01 72 3.72 64.46 37 5.47 No 47 0.24 No 27 0.6 Yes -59 0.33 No 43 67.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 245005500 + NM_001312872 COX20 1 1.63 2.15 61 -0.18 0 31 5.86 Yes 69 0.73 No 26 0.88 Yes -30 0.65 No 40 80.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 85834789 + NM_001318797 COX4I1 1 0.39 2.9 68 -3.32 0 34 6.78 Yes 21 1.59 Yes 33 0.86 Yes -33 0.87 Yes 37 89.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 85840061 + NM_001318797 COX4I1 1 0.1 1.56 54 8.81 92.36 29 5.23 No 16 0.55 No 28 0.79 Yes -28 0.75 Yes 42 76.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 85840313 + NM_001318797 COX4I1 1 0.01 0.14 10 -3.5 0 15 4.93 No 31 -3.38 No 21 0.52 Yes -42 0.51 No 41 19.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 85840365 + NM_001318797 COX4I1 1 0.09 1.28 46 3.21 66.85 32 5.57 Yes 28 1.5 Yes 0 0 No -31 0.9 Yes 39 90.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85840432 + NM_001318797 COX4I1 1 0.2 3.06 65 1.34 79.7 13 4 No 50 -3.46 No 23 0.73 Yes -23 0.8 Yes 47 31.45 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 75216067 - NM_004255 COX5A 1 0.22 3.99 68 6.35 87.07 30 5.6 Yes 53 0.04 No 0 0 No -29 0.93 Yes 41 93.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 75223835 - NM_004255 COX5A 1 0.05 0.39 24 3.09 0 30 6.08 Yes 17 0.55 No 0 0 No -29 0.41 No 41 47.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98262775 + NM_001862 COX5B 1 0.01 0.1 7 4.43 80.14 12 5.46 No -1 -0.87 No 0 0 No -23 0.78 Yes 47 65.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 98262979 + NM_001862 COX5B 1 0.07 0.5 28 5.25 74.85 29 5.38 No 33 0.2 No 28 0.67 Yes -28 0.82 Yes 42 79.25 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 98264422 + NM_001862 COX5B 1 0.01 0.15 7 8.6 85.33 18 4.69 No 5 0.48 No 28 0.82 Yes -23 0.96 Yes 47 97.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36139570 + NM_001863 COX6B1 1 0.01 0.11 7 3.79 82.45 16 4.98 No 40 0.97 Yes 0 0 No -32 0.3 No 42 45.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36139577 + NM_001863 COX6B1 1 0.01 0.17 10 1.54 0 10 4 No 47 0.96 Yes 0 0 No -39 0.27 No 45 52.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36139672 + NM_001863 COX6B1 1 0.02 0.26 14 4.4 81.63 16 5.57 Yes -4 0.53 No 0 0 No -25 0.68 Yes 55 67.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 36146367 + NM_001863 COX6B1 1 0.03 0.56 28 4.82 76.97 39 8.12 Yes 26 0.91 Yes 0 0 No -38 0.86 Yes 32 93.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36146915 + NM_001863 COX6B1 1 0.01 0.14 9 8.81 87.64 22 6.75 Yes 70 0.91 Yes 0 0 No -22 0.46 No 48 53.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36149502 + NM_001863 COX6B1 1 0.01 0.24 15 -1.05 0 12 4 No 12 1.2 Yes 0 0 No -24 0.84 Yes 46 85.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100898611 - NM_004374 COX6C 1 0.34 5.11 72 8.39 98.73 17 8.36 Yes 4 0.8 Yes 27 0.74 Yes -26 0.67 Yes 44 78.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 100899846 - NM_004374 COX6C 1 0.03 0.47 26 -12.17 0 21 6.8 Yes 8 1.33 Yes 0 0 No -20 0.56 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 100904276 - NM_004374 COX6C 1 2.28 21.4 72 -2.69 0 30 6.62 Yes 30 0.43 No 25 0.82 Yes -30 0.81 Yes 40 88.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 75947699 - NM_001865 COX7A2 1 0.02 0.33 18 0.01 0 15 3.87 No 20 0.56 No 0 0 No -32 0.61 No 38 79.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 75948418 - NM_001865 COX7A2 1 0.01 0.21 14 4.74 84.41 34 6.04 Yes 70 0.91 Yes 0 0 No -30 0.83 Yes 40 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 75950099 - NM_001865 COX7A2 1 0.03 0.44 24 -6.66 73.05 37 5.81 Yes 32 0.74 No 0 0 No -36 0.58 No 34 72.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 75950101 - NM_001865 COX7A2 1 0.04 0.47 27 -3.77 0 35 5.7 Yes 30 0.75 No 0 0 No -34 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 75950970 - NM_001865 COX7A2 1 0.02 0.26 15 0.7 0 20 4.57 No 28 1.11 Yes 0 0 No -19 0.59 No 35 43.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 75951586 - NM_001865 COX7A2 1 0.01 0.17 10 6.5 86.2 22 5.74 Yes 9 0.98 Yes 0 0 No -21 0.84 Yes 49 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 75951655 - NM_001865 COX7A2 1 0.04 0.47 25 -11.94 65.76 26 5.48 No 29 0.65 No 25 0.89 Yes -25 0.72 Yes 45 75.22 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 75951724 - NM_001865 COX7A2 1 0.01 0.13 8 4.33 87.07 12 5.39 No 32 0.54 No 0 0 No -28 0.42 No 44 40.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 75953255 - NM_001865 COX7A2 1 0.34 3.63 68 8.86 88.93 38 6.53 Yes 25 2.82 Yes 0 0 No -32 0.65 No 38 79.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 42578496 - NM_001319037 COX7A2L 1 0.73 4.88 71 -1.64 0 60 7.65 Yes 7 0.95 Yes 0 0 No -35 0.48 No 35 74.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 77157240 + NM_001866 COX7B 1 0.07 1.15 49 10.9 92.63 16 7.52 Yes 3 0.85 Yes 41 0.68 Yes -41 0.45 No 41 62.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 77157417 + NM_001866 COX7B 1 0.16 2.67 61 6.5 84.18 27 7.8 Yes 14 1.32 Yes 0 0 No -26 0.92 Yes 44 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77158146 + NM_001866 COX7B 1 0.28 4.68 69 -1.46 0 10 4 No 41 0.82 Yes 0 0 No -41 0.64 No 29 67.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 77160684 + NM_001866 COX7B 1 0.07 0.94 39 -0.99 0 26 5.35 No 13 1.36 Yes 0 0 No -25 0.8 Yes 45 92.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63743745 + NM_004074 COX8A 1 0.01 0.11 8 7.87 84.47 17 5.48 No 72 1.68 Yes 0 0 No -31 0.94 Yes 39 95.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 28717061 + NM_001199775 CPD 1 1.18 0.44 25 3.01 0 25 5.92 Yes 12 0.95 Yes 0 0 No -24 0.72 Yes 46 76.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 28777099 + NM_001199775 CPD 1 0.97 0.54 28 3.01 0 37 5.68 Yes 24 0.72 No 0 0 No -36 0.9 Yes 34 91.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 28778774 + NM_001199775 CPD 1 0.46 0.26 14 8.73 84.5 23 6.16 Yes 61 1.07 Yes 22 0.87 Yes -22 0.85 Yes 48 87.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 15009961 + NM_001177381 CPEB2 1 13.87 0.78 38 4.91 78.08 25 5.61 Yes 9 -1.63 No 24 0.92 Yes -24 0.74 Yes 46 80.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 15029065 + NM_001177381 CPEB2 1 2.05 1.39 46 7.33 80.57 37 6.47 Yes 62 0.85 Yes 0 0 No -36 0.89 Yes 34 89.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 15054661 + NM_001177381 CPEB2 1 1.09 0.31 20 4.66 88.76 51 4.6 No 38 1.25 Yes 0 0 No -23 0.75 Yes 47 67.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 15065361 + NM_001177381 CPEB2 1 0.31 0.13 8 3.31 71.36 27 6.47 Yes 14 0.91 Yes 26 0.89 Yes -26 0.93 Yes 44 85.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 173339651 + NM_001308192 CPEB4 1 0.19 0.11 7 6.4 80.79 24 6.39 Yes 11 0.67 No 0 0 No -32 0.24 No 39 42.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 173349002 + NM_001308192 CPEB4 1 0.18 0.11 7 9.32 89.48 25 4.06 No 24 1.2 Yes 0 0 No -24 0.76 Yes 46 70.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 173370028 + NM_001308192 CPEB4 1 0.58 0.25 14 5.96 79.1 51 7.42 Yes 57 0.6 No 31 0.02 Yes -50 0.75 Yes 20 67.32 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 173370028 + NM_001308192 CPEB4 1 3.07 1.5 56 5.96 79.1 51 7.42 Yes 57 0.6 No 31 0.02 Yes -50 0.75 Yes 20 67.32 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 173376882 + NM_001308192 CPEB4 1 0.14 0.18 12 9.99 82.39 33 7.78 Yes 20 0.99 Yes 0 0 No -32 0.79 Yes 38 81.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34216473 - NM_001198863 CPNE1 1 0.25 0.54 23 3.96 88.39 21 4.92 No 46 -2 No 0 0 No -24 0.65 No 50 86.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 34218884 - NM_001198863 CPNE1 1 0.14 0.33 18 -0.55 0 11 4.12 No 73 1.66 Yes 0 0 No -32 0.83 Yes 38 87.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34219086 - NM_001198863 CPNE1 1 0.2 0.25 14 -9.07 0 14 3.87 No 17 1.34 Yes 0 0 No -29 0.59 No 38 34.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 34219120 - NM_001198863 CPNE1 1 0.11 0.21 12 6.85 85.78 23 5.72 Yes 38 0.95 Yes 19 0.71 Yes -25 0.43 No 45 51.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 34220145 - NM_001198863 CPNE1 1 0.06 0.11 8 -2.72 0 19 4.58 No 20 0.62 No 0 0 No -32 0.85 Yes 38 85.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57179999 + NM_152727 CPNE2 1 0.96 0.13 8 2.22 77.8 31 6.08 Yes 18 1.34 Yes 0 0 No -30 0.76 Yes 40 85.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 87527369 + NM_003909 CPNE3 1 1.25 1.97 56 8.33 88.64 24 5.2 No 55 1.22 Yes 23 0.9 Yes -20 0.59 No 47 64.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 87537104 + NM_003909 CPNE3 1 0.22 0.39 20 11.83 87.01 40 8.41 Yes 27 1.9 Yes 31 0.84 Yes -31 0.72 Yes 39 74.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 87533831 + NM_003909 CPNE3 1 0.22 0.38 20 7.25 90.85 21 6.73 Yes 8 1.41 Yes 20 0.75 Yes -20 0.56 No 50 63.99 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 87536936 + NM_003909 CPNE3 1 0.46 0.78 29 9.37 97.5 29 6.37 Yes 22 0.93 Yes 34 0.77 Yes -34 0.83 Yes 36 87.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 87537104 + NM_003909 CPNE3 1 2.87 5.08 68 11.83 87.01 40 8.41 Yes 27 1.9 Yes 31 0.84 Yes -31 0.72 Yes 39 74.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 36709528 - NM_001314019 CPNE5 1 0.99 0.47 26 4.76 82.61 20 5.74 Yes 7 0.64 No 0 0 No -19 0.73 Yes 51 65.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 36711015 - NM_001314019 CPNE5 1 0.85 0.49 23 4.36 90.19 24 4.8 No 55 0.24 No 0 0 No -23 0.82 Yes 47 53.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 36711595 - NM_001314019 CPNE5 1 0.11 0.1 7 7.49 81.02 19 4.66 No 61 0.62 No 0 0 No -25 0.49 No 49 37.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36711980 - NM_001314019 CPNE5 1 0.17 0.15 9 6.81 78.86 19 5.18 No 50 0.99 Yes 0 0 No -57 0.54 No 44 60.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36712005 - NM_001314019 CPNE5 1 0.4 0.32 18 10.45 79.17 38 6.24 Yes 25 1.01 Yes 0 0 No -24 0.74 Yes 38 80.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36712304 - NM_001314019 CPNE5 1 1.2 0.72 36 12.48 91.61 37 7.19 Yes 24 1.82 Yes 0 0 No -36 0.63 No 34 62.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36713316 - NM_001314019 CPNE5 1 0.19 0.24 15 5.03 77.49 46 6.35 Yes 33 -0.05 No 25 0.96 Yes -27 0.45 No 32 72.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 36713993 - NM_001314019 CPNE5 1 2.92 3.1 65 8.15 83.86 21 5.9 Yes 54 0.18 No 0 0 No -28 0.61 No 50 46.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89645264 + NM_153636 CPNE7 1 11.62 1.78 53 3.82 75.93 28 8.02 Yes 52 -0.69 No 27 0.77 Yes -27 0.82 Yes 43 90.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89648817 + NM_153636 CPNE7 1 1.64 0.25 16 6.88 83.15 20 5.09 No 7 1.31 Yes 0 0 No -25 0.78 Yes 45 73.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89649851 + NM_153636 CPNE7 1 13.36 1.93 56 6.64 65.91 27 5.74 Yes 14 0.97 Yes 26 0.87 Yes -26 0.69 Yes 44 79.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 39069911 - NM_153634 CPNE8 1 0.35 0.25 9 4.3 0 23 11.06 Yes 31 0.92 Yes 0 0 No -43 0.26 No 27 52.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 39070131 - NM_153634 CPNE8 1 0.56 0.46 27 6.93 87.12 24 6.4 Yes 11 1.19 Yes 0 0 No -23 0.72 Yes 47 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 39071301 - NM_153634 CPNE8 1 0.45 0.47 24 9.79 85.87 28 5.83 Yes 64 1.3 Yes 0 0 No -27 0.66 Yes 43 77.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 39073517 - NM_153634 CPNE8 1 1.15 1.11 45 6.17 71.83 30 6.26 Yes 6 0.73 No 26 0.7 Yes -29 0.5 No 41 59.11 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 39080505 - NM_153634 CPNE8 1 2.87 2.67 61 3.05 69.56 10 5.48 No 26 0.44 No 0 0 No -27 0.59 No 43 49.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 39080526 - NM_153634 CPNE8 1 0.39 0.33 21 4.63 74.18 18 4.04 No 5 0.41 No 0 0 No -21 0.8 Yes 49 66.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 39083311 - NM_153634 CPNE8 1 0.39 0.35 22 -6.73 0 20 4.47 No 76 -3.18 No 0 0 No -42 0.69 Yes 51 26.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 39085137 - NM_153634 CPNE8 1 0.75 0.71 34 4.88 74.38 87 4.84 No 7 0.58 No 0 0 No -25 0.65 No 51 57.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 39087137 - NM_153634 CPNE8 1 0.11 0.1 7 6.57 84.89 17 4.95 No 4 0.22 No 0 0 No -33 0.45 No 40 53.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 39087518 - NM_153634 CPNE8 1 0.12 0.15 10 1.88 74.42 16 4.12 No 3 0.27 No 0 0 No -21 0.89 Yes 49 74.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 39089863 - NM_153634 CPNE8 1 1.39 1.47 46 8.73 93.23 22 7.74 Yes 9 0.95 Yes 0 0 No -21 0.88 Yes 49 87.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 39098051 - NM_153634 CPNE8 1 0.18 0.21 11 10.18 78.93 14 5.73 Yes 55 0.83 Yes 0 0 No -35 0.39 No 27 46.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 39128484 - NM_153634 CPNE8 1 0.21 0.22 11 4.16 63.86 31 5.69 Yes 57 0.91 Yes 0 0 No -30 0.7 Yes 40 72.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 39131980 - NM_153634 CPNE8 1 2.65 3.11 64 7.6 85.66 30 5.42 No 3 1.2 Yes 0 0 No -30 0.44 No 40 73.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 39150672 - NM_153634 CPNE8 1 0.23 0.28 16 7.74 92.98 29 5.48 No 53 0.26 No 0 0 No -36 0.45 No 34 71.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 39154690 - NM_153634 CPNE8 1 0.08 0.1 7 -15.11 0 32 6.27 Yes 19 1.04 Yes 0 0 No -35 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 39210266 - NM_153634 CPNE8 1 0.35 0.36 21 4.06 75.3 25 6.51 Yes 12 0.79 Yes 0 0 No -24 0.79 Yes 46 72.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 39210351 - NM_153634 CPNE8 1 0.23 0.28 15 7.36 93.57 73 8.2 Yes 60 1.17 Yes 0 0 No -27 0.45 No 27 44.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 39224720 - NM_153634 CPNE8 1 0.15 0.18 10 4.46 79.24 25 6.46 Yes 12 1.2 Yes 0 0 No -24 0.93 Yes 46 90.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 39241778 - NM_153634 CPNE8 1 0.34 0.51 27 5.02 93.81 24 3.44 No 73 0.27 No 0 0 No -23 0.46 No 50 59.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 39256724 - NM_153634 CPNE8 1 0.67 0.56 27 6.69 92.52 23 5 No 64 1.27 Yes 0 0 No -22 0.61 No 48 79.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 39257688 - NM_153634 CPNE8 1 0.15 0.14 9 8.05 83.82 21 5.74 Yes 8 1.33 Yes 0 0 No -20 0.85 Yes 50 88.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 98305063 - NM_000097 CPOX 1 0.11 0.28 18 6.32 85.1 14 4.75 No 17 0.45 No 0 0 No -21 0.91 Yes 49 90.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 98308567 - NM_000097 CPOX 1 0.46 1.31 46 5.09 81.8 19 4.69 No 38 1.07 Yes 0 0 No -28 0.89 Yes 42 89.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 98308601 - NM_000097 CPOX 1 0.25 0.71 36 7.04 81.75 17 4.94 No 4 1.08 Yes 25 0.9 Yes -25 0.91 Yes 45 92.94 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 98308644 - NM_000097 CPOX 1 0.05 0.13 9 10.21 82.98 17 6.38 Yes 52 -2.85 No 25 0.9 Yes -26 0.71 Yes 44 74.72 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145618971 - NM_013291 CPSF1 1 0.27 0.32 19 6.01 86.24 40 7.05 Yes 45 1.91 Yes 0 0 No -32 0.57 No 38 21.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145619269 - NM_013291 CPSF1 1 0.65 0.56 29 -3.6 0 9 4.33 No -4 1.03 Yes 23 0.91 Yes -56 0.55 No 14 41.56 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 145619711 - NM_013291 CPSF1 1 0.53 0.61 27 3.45 73.2 28 6.24 Yes 68 2.16 Yes 27 0.95 Yes -27 0.86 Yes 43 82.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145619988 - NM_013291 CPSF1 1 0.28 0.28 19 -5.44 64.57 19 5.46 No 3 -1.08 No 29 0.43 Yes -18 0.84 Yes 60 46.39 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 145620551 - NM_013291 CPSF1 1 0.85 1.08 44 3.71 71.3 29 5.39 No 16 0.3 No 0 0 No -28 0.92 Yes 42 93.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145621740 - NM_013291 CPSF1 1 0.68 0.51 28 4.45 80.83 24 4.9 No 11 0.64 No 32 0.61 Yes -23 0.97 Yes 47 95.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145622620 - NM_013291 CPSF1 1 0.27 0.19 12 -2.33 0 19 4.24 No 16 2.12 Yes 0 0 No -28 0.81 Yes 42 79.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145622869 - NM_013291 CPSF1 1 1.15 1.06 43 -0.36 0 11 4.12 No 15 1.5 Yes 0 0 No -27 0.65 No 40 64.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145623092 - NM_013291 CPSF1 1 3.77 4.06 66 4.21 79 25 5.56 Yes 12 1.67 Yes 0 0 No -24 0.78 Yes 46 87.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145623825 - NM_013291 CPSF1 1 0.25 0.26 15 0.34 0 17 4.12 No 14 1.17 Yes 0 0 No -26 0.92 Yes 44 91.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145624053 - NM_013291 CPSF1 1 0.18 0.22 14 3.02 78.42 20 7.14 Yes 7 0.26 No 26 0.71 Yes -19 0.92 Yes 51 86.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145624256 - NM_013291 CPSF1 1 0.51 0.54 25 -0.97 70.4 41 9.03 Yes 28 1.36 Yes 0 0 No -29 0.73 Yes 30 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145624423 - NM_013291 CPSF1 1 0.21 0.18 13 0.87 0 15 3.77 No 38 -1.13 No 0 0 No -25 0.95 Yes 45 86.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145625035 - NM_013291 CPSF1 1 0.13 0.13 7 2.86 72.04 61 7.59 Yes 74 0.48 No 0 0 No -27 0.38 No 44 75.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 145625277 - NM_013291 CPSF1 1 0.16 0.15 8 4.21 75.12 23 4.36 No 71 0.55 No 20 0.8 Yes -26 0.68 Yes 40 55.18 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 145626208 - NM_013291 CPSF1 1 0.25 0.21 14 1.11 0 23 5.29 No 10 1.09 Yes 0 0 No -22 0.61 No 48 51.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145628386 - NM_013291 CPSF1 1 1.77 1.76 62 5.91 82.52 29 6.21 Yes 16 0.77 No 0 0 No -28 0.61 No 44 65.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145630689 - NM_013291 CPSF1 1 3.06 3.13 67 6.99 91.84 22 5.22 No 59 -3.2 No 0 0 No -26 0.76 Yes 44 71.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145634522 - NM_013291 CPSF1 1 0.17 0.1 7 6.01 75.63 22 6.63 Yes 49 2.24 Yes 0 0 No -61 0.41 No 49 37.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 92595479 + NM_001322272 CPSF2 1 0.5 1.38 50 5.53 76 35 5.8 Yes 60 -3.31 No 0 0 No -19 0.43 No 49 55.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 92595484 + NM_001322272 CPSF2 1 0.33 0.88 38 3.37 0 40 6.22 Yes 65 -3.32 No 0 0 No -24 0.57 No 46 55.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 92596750 + NM_001322272 CPSF2 1 0.21 0.58 28 0.66 78.44 16 5.91 Yes 62 0.13 No 0 0 No -25 0.42 No 45 46.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 92600331 + NM_001322272 CPSF2 1 0.08 0.26 15 -10.97 0 10 3.87 No 33 0.21 No 25 0.4 Yes -45 0.66 Yes 25 77.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 92609351 + NM_001322272 CPSF2 1 0.21 0.57 27 -0.01 0 33 6.96 Yes 20 1.59 Yes 0 0 No -32 0.64 No 38 85.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 92609740 + NM_001322272 CPSF2 1 0.12 0.28 16 6.58 73.15 30 6.12 Yes 73 0.41 No 0 0 No -29 0.7 Yes 41 88.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 92621471 + NM_001322272 CPSF2 1 0.04 0.14 9 0.05 0 70 6.14 Yes 15 0.86 Yes 0 0 No -33 0.47 No 37 64.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 92622807 + NM_001322272 CPSF2 1 0.05 0.13 9 6.12 73.37 28 4.95 No 50 0 No 20 0.94 Yes -27 0.76 Yes 43 80.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 9570864 + NM_001321834 CPSF3 1 0.13 0.31 18 -2.88 0 20 4.46 No 44 0.22 No 22 0.94 Yes -19 0.64 No 51 42.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 99045395 + NM_001318162 CPSF4 1 1.8 1.4 49 6.76 87.44 18 6.48 Yes 5 1.21 Yes 28 0.25 Yes -28 0.45 No 53 74.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 99047674 + NM_001318162 CPSF4 1 0.14 0.13 8 6.84 81.32 29 5.04 No NA NA NA 0 0 No -26 0.68 Yes 44 74.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99047740 + NM_001318162 CPSF4 1 0.42 0.39 22 6.46 85.02 23 6.92 Yes 10 0.35 No 0 0 No -22 0.92 Yes 48 92.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99049897 + NM_001318162 CPSF4 1 0.1 0.13 8 4.73 82.24 17 4.8 No 4 0.54 No 0 0 No -16 0.62 No 54 64.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99049975 + NM_001318162 CPSF4 1 0.85 1 46 1.93 0 34 8.37 Yes 21 2.86 Yes 25 0.91 Yes -33 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 99051588 + NM_001318162 CPSF4 1 49.99 33 72 7.22 82.5 27 5.3 No -1 0.56 No 26 0.66 Yes -24 0.36 No 46 49.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 99051666 + NM_001318162 CPSF4 1 19.61 13.01 72 4.59 76.16 31 5.48 No 59 0.58 No 27 0.84 Yes -30 0.83 Yes 43 70.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 99053604 + NM_001318162 CPSF4 1 0.22 0.22 13 10.57 88.43 28 7.14 Yes 15 1.85 Yes 0 0 No -27 0.91 Yes 43 90.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99054008 + NM_001318162 CPSF4 1 0.12 0.13 8 3.06 73.11 19 5.42 No 70 -3.44 No 23 0.77 Yes -23 0.91 Yes 47 90.46 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 69642119 + NM_001300947 CPSF6 1 0.23 0.63 31 11.19 88.44 31 6.76 Yes 18 2.04 Yes 0 0 No -33 0.61 No 40 62.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 69646812 + NM_001300947 CPSF6 1 0.03 0.1 7 -14.58 63.39 36 6.56 Yes 53 0.48 No 23 0.94 Yes -32 0.49 No 37 62.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 69648781 + NM_001300947 CPSF6 1 0.18 0.36 18 10.26 88.64 19 5.03 No 6 0.75 No 28 0.68 Yes -25 0.72 Yes 45 73.53 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 69649739 + NM_001300947 CPSF6 1 0.15 0.32 19 7.28 85.73 28 4.63 No 37 0.36 No 0 0 No -27 0.8 Yes 43 84.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 69652778 + NM_001300947 CPSF6 1 0.78 0.18 13 5.68 68.16 33 5.83 Yes 20 0.68 No 0 0 No -32 0.67 Yes 38 70.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 69653186 + NM_001300947 CPSF6 1 0.05 0.18 11 -5.92 0 14 4.47 No 58 -5.33 No 24 0.86 Yes -30 0.84 Yes 40 56.83 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 69656149 + NM_001300947 CPSF6 1 20.39 64 72 3.25 79.73 20 4.67 No -1 0.84 Yes 22 0.9 Yes -19 0.87 Yes 51 86.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 69656248 + NM_001300947 CPSF6 1 0.04 0.13 9 1.81 74.39 14 5.33 No 72 -6.03 No 26 0.53 Yes -24 0.53 No 48 43.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 69656889 + NM_001300947 CPSF6 1 0.36 0.79 32 6.92 87.82 23 6.48 Yes 58 -1.87 No 0 0 No -23 0.75 Yes 47 86.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 69661275 + NM_001300947 CPSF6 1 0.45 1.07 43 5.99 85.93 33 4.25 No 61 0.82 Yes 0 0 No -32 0.53 No 47 56.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 69663257 + NM_001300947 CPSF6 1 0.53 1.19 46 2.16 63.58 34 5.73 Yes 21 0.23 No 24 0.58 Yes -33 0.69 Yes 37 73.92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61178592 - NM_024811 CPSF7 1 0.18 0.28 17 -9.22 0 14 3.96 No 62 -5.99 No 23 0.83 Yes -13 0.82 Yes 18 36.5 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 61181459 - NM_024811 CPSF7 1 0.82 1.57 50 7.66 88.97 35 5.5 No 22 1.45 Yes 0 0 No -23 0.37 No 40 55.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 61183228 - NM_024811 CPSF7 1 0.07 0.14 9 5.27 81.34 27 5.74 Yes 66 -1.61 No 0 0 No -31 0.5 No 37 36.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 61188003 - NM_024811 CPSF7 1 0.33 0.54 29 5.58 86.67 23 5 No 64 1.2 Yes 22 0.97 Yes -22 0.87 Yes 48 93.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61188600 - NM_024811 CPSF7 1 1.42 2.26 66 4.07 91.04 66 7.22 Yes 12 1.83 Yes 21 0.93 Yes -24 0.91 Yes 46 84.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61188603 - NM_024811 CPSF7 1 3.32 5.42 70 3.77 72.37 63 7.05 Yes 9 1.84 Yes 21 0.93 Yes -21 0.88 Yes 49 86.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61188730 - NM_024811 CPSF7 1 2.28 3.56 69 7.54 82.08 32 8.31 Yes 19 1.14 Yes 31 0.87 Yes -31 0.88 Yes 39 89.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61188964 - NM_024811 CPSF7 1 0.16 0.29 18 6.55 88.06 24 6.08 Yes 54 1.58 Yes 0 0 No -23 0.81 Yes 47 77.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61189015 - NM_024811 CPSF7 1 0.17 0.32 17 0.43 0 16 4.47 No 3 1.62 Yes 0 0 No -15 0.39 No 55 58.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 61189026 - NM_024811 CPSF7 1 0.73 1.33 51 2.33 74.63 25 6.04 Yes 45 -4.21 No 0 0 No -24 0.93 Yes 46 82.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61189111 - NM_024811 CPSF7 1 0.09 0.17 12 -3.3 0 11 3.99 No 53 -4.42 No 26 0.62 Yes -25 0.18 No 54 13.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68553504 - NM_001031847 CPT1A 1 0.65 0.31 17 8.94 79.14 30 6.48 Yes 50 0.61 No 29 0.8 Yes -29 0.86 Yes 41 84.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 51009717 - NM_001145137 CPT1B 1 5.32 1.74 52 1 0 25 6.08 Yes 12 1.2 Yes 19 0.72 Yes -24 0.73 Yes 46 80.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 51009745 - NM_001145137 CPT1B 1 0.92 0.24 15 2.31 75.26 17 4.8 No 55 0.37 No 0 0 No -19 0.66 No 51 34.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 51010571 - NM_001145137 CPT1B 1 0.4 0.15 8 -7.25 0 16 4.12 No 67 -4.21 No 0 0 No -15 0.48 No 52 43.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 51012351 - NM_001145137 CPT1B 1 112.82 15.01 72 7 72.08 44 6.53 Yes 1 0.2 No 0 0 No -36 0.77 Yes 34 81.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 51012613 - NM_001145137 CPT1B 1 0.96 0.11 8 4.85 93.06 12 4.47 No 16 0.39 No 0 0 No -19 0.54 No 53 52.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 51015914 - NM_001145137 CPT1B 1 0.24 0.1 7 3.46 71.32 26 6.15 Yes 13 2.23 Yes 0 0 No -25 0.91 Yes 45 88.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 53678452 + NM_000098 CPT2 1 1.15 0.94 36 10.51 83.34 25 6.4 Yes 12 1.74 Yes 0 0 No -24 0.89 Yes 46 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 2775419 - NM_001184699 CPXM1 1 0.19 0.21 10 11.21 95.65 28 4.16 No 69 0.13 No 0 0 No -31 0.71 Yes 39 71.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2777247 - NM_001184699 CPXM1 1 0.16 0.13 7 4.22 75.23 28 4.16 No 64 0.7 No 0 0 No -20 0.4 No 51 45.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 2778934 - NM_001184699 CPXM1 1 0.35 0.21 13 3 0 28 9.59 Yes 15 1.61 Yes 0 0 No -27 0.89 Yes 43 91.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 2779531 - NM_001184699 CPXM1 1 0.64 0.28 17 -5.82 0 13 4 No 40 1 Yes 0 0 No -52 0.93 Yes 18 92.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 207637085 + NM_001006658 CR2 1 0.46 0.31 17 10.58 83.75 17 5.66 Yes 4 0.49 No 0 0 No -16 0.46 No 45 51.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207638789 + NM_001006658 CR2 1 0.23 0.17 10 9.49 82.32 56 7.54 Yes 43 0.06 No 0 0 No -28 0.37 No 42 32.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207641783 + NM_001006658 CR2 1 0.09 0.11 7 5.59 78.66 27 4.84 No 65 -3.78 No 0 0 No -27 0.51 No 43 50.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207641952 + NM_001006658 CR2 1 0.2 0.21 14 7.31 89.06 25 5.57 Yes 72 0.41 No 0 0 No -22 0.59 No 46 54.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207643123 + NM_001006658 CR2 1 0.18 0.17 11 -4.77 0 30 5.74 Yes 56 0.86 Yes 0 0 No -29 0.76 Yes 41 74.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 207643380 + NM_001006658 CR2 1 0.29 0.33 16 6.18 81.48 45 6.98 Yes 21 0.69 No 0 0 No -33 0.49 No 37 76.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 207644347 + NM_001006658 CR2 1 0.25 0.35 20 1.65 0 9 3.87 No 14 1.28 Yes 20 0.9 Yes -26 0.97 Yes 44 97.8 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 207648145 + NM_001006658 CR2 1 0.2 0.26 16 -8.53 0 19 4.24 No 26 0.34 No 29 0.82 Yes -6 0.28 No 59 23.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 207648192 + NM_001006658 CR2 1 0.22 0.35 16 6.69 78.15 19 5.38 No 26 1.32 Yes 0 0 No -18 0.62 No 44 66.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 207649587 + NM_001006658 CR2 1 0.16 0.17 10 1.04 0 12 4.24 No 28 0.62 No 0 0 No -40 0.41 No 48 51.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207649675 + NM_001006658 CR2 1 0.11 0.13 8 3.67 79.68 31 6.56 Yes 49 0.57 No 0 0 No -30 0.44 No 40 67.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207662312 + NM_001006658 CR2 1 0.11 0.14 9 4.28 89.01 22 4.68 No 30 0.5 No 0 0 No -22 0.43 No 48 32.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 3745565 - NM_001144958 CRACR2A 1 0.47 0.13 7 -4.94 68.27 36 5.26 No 19 1.53 Yes 0 0 No -35 0.72 Yes 35 93.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 3782003 - NM_001144958 CRACR2A 1 1.85 0.96 37 4.59 79.27 73 9.16 Yes 20 1.57 Yes 0 0 No -32 0.94 Yes 38 93.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 3791443 - NM_001144958 CRACR2A 1 4.28 1.24 45 8.16 86.04 22 6.29 Yes 9 0.68 No 0 0 No -21 0.83 Yes 49 66.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 3795260 - NM_001144958 CRACR2A 1 0.37 0.18 9 7.89 82.98 31 6.4 Yes 18 0.8 Yes 0 0 No -31 0.38 No 40 47.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 3861793 - NM_001144958 CRACR2A 1 1.3 0.18 11 7.02 90.83 25 5.01 No 76 -4.64 No 0 0 No -24 0.9 Yes 46 88.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 1717959 + NM_020825 CRAMP1 1 1.21 0.15 10 2.57 82.47 20 4.66 No 26 0.62 No 22 0.75 Yes -38 0.74 Yes 51 49.49 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 1717959 + NM_020825 CRAMP1 1 9.08 1.22 47 2.57 82.47 20 4.66 No 26 0.62 No 22 0.75 Yes -38 0.74 Yes 51 49.49 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 1717989 + NM_020825 CRAMP1 1 1.76 0.21 14 1.63 73.42 23 6 Yes 10 1.24 Yes 0 0 No -22 0.96 Yes 48 90.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 1722317 + NM_020825 CRAMP1 1 0.42 0.11 7 6.73 85.36 23 5.74 Yes 10 0.77 Yes 0 0 No -22 0.65 No 48 77.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 3195747 - NM_001173482 CRBN 1 0.92 0.53 26 3.94 93.7 17 4.69 No 50 1.85 Yes 0 0 No -24 0.52 No 46 44.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 3196513 - NM_001173482 CRBN 1 0.8 0.31 16 -16.64 64.55 31 6.71 Yes 65 -4.57 No 0 0 No -30 0.67 Yes 40 48.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 3197654 - NM_001173482 CRBN 1 0.52 0.22 13 -3.47 47.71 31 7.35 Yes 18 0.61 No 0 0 No -30 0.58 No 40 45.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 3214331 - NM_001173482 CRBN 1 23.7 18.83 72 11.19 82.21 27 5.48 No 38 1.26 Yes 26 0.91 Yes -26 0.65 No 44 73.57 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 3214600 - NM_001173482 CRBN 1 0.24 0.28 18 -4.21 0 9 4.36 No 45 -1.99 No 0 0 No -42 0.74 Yes 28 68.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 65592694 + NR_024548 CRCP 1 0.62 0.54 32 -0.82 0 30 5.35 No 17 1.2 Yes 0 0 No -29 0.76 Yes 41 90.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65595986 + NR_024548 CRCP 1 0.16 0.21 14 7.56 87.25 38 7.81 Yes 25 2.49 Yes 0 0 No -37 0.68 Yes 33 87.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65607286 + NR_024548 CRCP 1 0.19 0.24 14 9.27 87.57 28 5.79 Yes 45 0.77 Yes 0 0 No -27 0.95 Yes 43 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65608917 + NR_024548 CRCP 1 0.3 0.38 19 10.36 87.91 28 5.36 No 35 1.03 Yes 0 0 No -27 0.55 No 43 66.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 65615688 + NR_024548 CRCP 1 0.29 0.29 13 6.88 90.88 21 6.04 Yes 76 0.84 Yes 0 0 No -20 0.86 Yes 50 83.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 208394961 + NM_134442 CREB1 1 0.08 0.13 9 9.76 89.75 28 5.45 No NA NA NA 0 0 No -30 0.47 No 40 35.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 208396104 + NM_134442 CREB1 1 0.1 0.15 9 6.51 88.39 27 5.65 Yes 14 0.51 No 0 0 No -26 0.65 No 44 63.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 208416444 + NM_134442 CREB1 1 0.08 0.13 9 3.37 74.06 65 6.34 Yes 28 0.34 No 0 0 No -46 0.44 No 24 46.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 208417279 + NM_134442 CREB1 1 0.28 0.43 20 8.81 83.96 28 6.38 Yes 15 0.6 No 0 0 No -23 0.7 Yes 47 86.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 208417352 + NM_134442 CREB1 1 0.12 0.22 13 2.03 83.21 29 5.89 Yes 16 0.86 Yes 0 0 No -28 0.79 Yes 42 63.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 208418028 + NM_134442 CREB1 1 0.36 0.51 29 4.77 82.31 31 5.83 Yes 18 0.53 No 0 0 No -30 0.93 Yes 40 94.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 208432169 + NM_134442 CREB1 1 0.96 0.4 20 0.6 67.5 22 5.89 Yes 48 0.75 No 26 0.35 Yes -21 0.56 No 49 36.6 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 208432169 + NM_134442 CREB1 1 0.97 0.42 23 0.6 67.5 22 5.89 Yes 48 0.75 No 26 0.35 Yes -21 0.56 No 49 36.6 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 208434937 + NM_134442 CREB1 1 0.29 0.38 18 5.01 82.9 22 6.46 Yes 9 1.12 Yes 0 0 No -21 0.4 No 49 41.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 208441354 + NM_134442 CREB1 1 2.53 3.92 70 9.27 87.67 35 5.37 No 13 0.62 No 25 0.67 Yes -29 0.42 No 49 38.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 208441833 + NM_134442 CREB1 1 0.11 0.17 10 1.14 64.2 74 8.46 Yes 55 1.6 Yes 25 0.69 Yes -25 0.71 Yes 45 62.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 35736371 + NM_006368 CREB3 1 0.26 0.29 15 3.14 73.28 30 5.39 No 60 -4 No 20 0.85 Yes -22 0.31 No 39 47.14 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 46314357 + NM_052854 CREB3L1 1 3.23 0.47 21 9.09 88.27 27 7.98 Yes 14 1.22 Yes 0 0 No -26 0.93 Yes 44 96.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46336721 + NM_052854 CREB3L1 1 2.23 0.46 20 10.69 85.29 41 6.35 Yes 28 1.09 Yes 40 0.26 Yes -40 0.8 Yes 30 69.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 137586167 - NM_001318246 CREB3L2 1 0.11 0.19 11 -9.17 72.77 30 5.39 No 72 1.33 Yes 0 0 No -29 0.42 No 41 57.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 137597046 - NM_001318246 CREB3L2 1 0.1 0.15 9 6.14 88.68 22 7.21 Yes 51 1.46 Yes 0 0 No -21 0.96 Yes 49 93.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 137597115 - NM_001318246 CREB3L2 1 1.1 1.86 57 3.01 0 33 6.4 Yes 57 0.94 Yes 0 0 No -29 0.74 Yes 38 75.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 137607514 - NM_001318246 CREB3L2 1 0.18 0.32 21 8.27 85.36 28 6.25 Yes 8 0.13 No 23 0.61 Yes -28 0.53 No 38 47 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 3801838 - NM_001079846 CREBBP 1 0.31 0.26 15 3.02 67.96 151 13.41 Yes 34 0.92 Yes 25 0.91 Yes -46 0.92 Yes 24 94.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 3820934 - NM_001079846 CREBBP 1 3.08 2.63 64 3.17 76.67 27 7.55 Yes 14 0.27 No 0 0 No -26 0.77 Yes 44 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 3820982 - NM_001079846 CREBBP 1 3.4 2.93 64 -0.94 0 14 3.87 No 74 0.23 No 0 0 No -36 0.51 No 39 52.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 3828784 - NM_001079846 CREBBP 1 0.1 0.17 11 6.44 76.82 30 5.36 No -3 0.4 No 0 0 No -29 0.33 No 41 61.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 3863026 - NM_001079846 CREBBP 1 0.21 0.24 15 3.43 76.59 22 4.9 No 48 0.63 No 0 0 No -21 0.62 No 49 70.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 3863074 - NM_001079846 CREBBP 1 0.09 0.11 8 3.53 79.92 13 3.97 No 0 0.69 No 0 0 No -19 0.89 Yes 51 84.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 3863123 - NM_001079846 CREBBP 1 0.16 0.18 10 10.09 92.09 36 7.36 Yes 23 0.25 No 0 0 No -35 0.66 No 35 69.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 3889675 - NM_001079846 CREBBP 1 0.15 0.18 12 12.49 80.39 184 14 Yes NA NA NA 0 0 No -36 0.54 No 42 43.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 3904852 - NM_001079846 CREBBP 1 0.41 0.43 23 9.02 88.94 77 8.75 Yes 58 1.08 Yes 0 0 No -22 0.68 Yes 48 61.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 3906768 - NM_001079846 CREBBP 1 0.13 0.15 9 5.45 82 35 5.74 Yes 72 -0.91 No 0 0 No -41 0.36 No 35 32.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 12765850 + NM_001310 CREBL2 1 0.49 0.18 8 5.24 90.14 28 5.29 No 65 0.26 No 0 0 No -27 0.53 No 39 65.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 12794213 + NM_001310 CREBL2 1 0.78 0.53 21 12.69 92.63 31 4.71 No 49 0.68 No 0 0 No -27 0.34 No 43 36.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 172505582 + NM_153607 CREBRF 1 1.08 0.1 7 3.8 84.41 37 5.41 No 24 0.98 Yes 0 0 No -31 0.64 No 39 79.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 172507591 + NM_153607 CREBRF 1 10.01 1.1 45 -0.57 0 29 4.79 No 16 0.46 No 28 0.71 Yes -32 0.82 Yes 38 85.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 172517322 + NM_153607 CREBRF 1 0.66 0.26 15 0.51 0 45 6.04 Yes 25 0.18 No 0 0 No -37 0.48 No 33 46.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 172535647 + NM_153607 CREBRF 1 0.61 0.21 11 3.37 68.18 16 4.41 No 61 0.95 Yes 0 0 No -23 0.75 Yes 47 73.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 172557547 + NM_153607 CREBRF 1 0.9 0.21 14 9.92 88.27 21 6.11 Yes 25 0.79 Yes 0 0 No -27 0.58 No 43 59.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 85374307 - NR_028027 CREBZF 1 0.32 0.14 9 8.72 86.3 18 4.9 No 37 1.19 Yes 0 0 No -21 0.38 No 53 60.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 85374338 - NR_028027 CREBZF 1 8.87 4.38 71 6.55 83.43 19 5.29 No 6 1.19 Yes 0 0 No -18 0.59 No 48 55.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 167511153 - NM_003851 CREG1 1 0.2 0.17 10 7.99 84.48 23 5.39 No 62 -1.62 No 0 0 No -22 0.69 Yes 48 81.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 9981147 + NM_001031717 CRELD1 1 1.89 0.29 17 6.04 85.13 25 5.1 No 12 0.01 No 0 0 No -21 0.4 No 46 57.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50313638 + NM_001135101 CRELD2 1 1.31 3.19 70 8.82 93.23 30 7.58 Yes 6 0.84 Yes 0 0 No -29 0.87 Yes 41 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50316782 + NM_001135101 CRELD2 1 0.08 0.26 15 7.86 80.56 32 6.16 Yes 76 1.18 Yes 0 0 No -31 0.77 Yes 39 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50318009 + NM_001135101 CRELD2 1 0.06 0.13 9 -13.99 69.07 23 10.18 Yes 10 2.01 Yes 0 0 No -22 0.95 Yes 48 88.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50319297 + NM_001135101 CRELD2 1 0.16 0.79 38 5.68 70.97 13 6.16 Yes 0 -0.13 No 0 0 No -29 0.45 No 41 55.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50320905 + NM_001135101 CRELD2 1 0.77 3.65 65 -2.33 73.48 29 6.45 Yes 16 1.15 Yes 0 0 No -28 0.91 Yes 42 79.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 35498239 + NM_182723 CREM 1 5.78 4.65 67 6.7 92.69 22 4.99 No 48 0.51 No 0 0 No -22 0.65 No 48 68.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 35500583 + NM_182723 CREM 1 17.62 13.86 72 11.23 95.13 52 6.65 Yes 65 1.12 Yes 24 0.21 Yes -24 0.53 No 45 34.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 35500588 + NM_182723 CREM 1 0.18 0.14 10 0.51 0 57 6.95 Yes 70 1.12 Yes 0 0 No -46 0.38 No 24 48.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 36658251 + NM_016441 CRIM1 1 0.86 0.38 23 9.97 86.02 21 5.17 No 8 0.23 No 0 0 No -23 0.8 Yes 47 89.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 36668403 + NM_016441 CRIM1 1 0.96 0.51 25 3.82 74.51 25 5.97 Yes 12 0.94 Yes 0 0 No -24 0.66 No 46 81.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 36739419 + NM_016441 CRIM1 1 0.42 0.35 18 -6.13 0 25 5.36 No 68 1.61 Yes 0 0 No -24 0.74 Yes 46 72.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 36749581 + NM_016441 CRIM1 1 0.37 0.14 8 4.64 70.79 45 7.75 Yes 55 0.96 Yes 0 0 No -44 0.58 No 26 70.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 36764497 + NM_016441 CRIM1 1 0.82 0.4 20 1.22 78.65 25 6.22 Yes 63 0.9 Yes 0 0 No -27 0.7 Yes 43 84.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 36770900 + NM_016441 CRIM1 1 0.52 0.18 11 8.65 80.07 29 6.35 Yes 58 1.31 Yes 0 0 No -26 0.49 No 42 58.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 36775688 + NM_016441 CRIM1 1 0.22 0.13 8 3.8 69.98 27 4.43 No 45 0.99 Yes 0 0 No -30 0.64 No 40 84.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 105953549 + NM_001311 CRIP1 1 193.38 52.93 72 7.12 82.87 21 4.7 No 32 -0.73 No 18 0.73 Yes -20 0.66 Yes 46 42.24 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 105954707 + NM_001311 CRIP1 1 0.05 0.9 40 3.27 77.57 19 4.53 No 47 1.61 Yes 0 0 No -19 0.76 Yes 11 47.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 43275791 - NM_206922 CRIP3 1 1.16 0.15 11 7.01 80.28 33 6.24 Yes 20 1.43 Yes 0 0 No -32 0.88 Yes 38 92.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 6003937 + NM_001323561 CRLS1 1 1.87 3.64 66 8.23 87.79 28 9.04 Yes 26 1.47 Yes 0 0 No -38 0.49 No 43 60.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 6004025 + NM_001323561 CRLS1 1 0.6 1.18 45 8.75 97.03 26 5.2 No 16 1.01 Yes 28 0.83 Yes -28 0.96 Yes 42 98.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 6006816 + NM_001323561 CRLS1 1 0.2 0.4 20 5 80.82 20 6.9 Yes 7 0.38 No 26 0.54 Yes -33 0.54 No 37 60.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 6009317 + NM_001323561 CRLS1 1 0.41 0.85 42 9.76 82.26 104 9.13 Yes 41 0.84 Yes 18 0.2 Yes -37 0.51 No 17 56.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 6012645 + NM_001323561 CRLS1 1 0.7 1.9 55 1.36 0 19 5.15 No 3 0.64 No 30 0.81 Yes -18 0.78 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 6020405 + NM_001323561 CRLS1 1 0.08 0.21 13 -3.09 40.37 33 6 Yes 20 0.82 Yes 0 0 No -32 0.75 Yes 38 68.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 20024364 - NM_001278628 CRNKL1 1 0.38 0.44 26 7.16 78.95 38 5.56 Yes 25 0.85 Yes 0 0 No -33 0.61 No 44 53.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 20028601 - NM_001278628 CRNKL1 1 0.15 0.11 7 -3.24 68.38 12 4.44 No 39 0.35 No 27 0.38 Yes -43 0.32 No 21 29.42 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 16955122 - NR_026752 CROCCP2 1 1.02 0.13 8 0.34 72.04 14 4.9 No 15 -1.12 No 0 0 No -57 0.5 No 13 36.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 86993611 + NM_001143935 CROT 1 1.19 0.64 26 6.2 85.38 24 4.92 No 1 0.57 No 0 0 No -20 0.7 Yes 50 51.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 86993636 + NM_001143935 CROT 1 0.33 0.15 11 6.1 86.14 33 4.03 No 75 0.3 No 0 0 No -32 0.64 No 38 78.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 87024672 + NM_001143935 CROT 1 0.37 0.13 9 4.33 84.23 23 5.92 Yes -2 1.79 Yes 0 0 No -22 0.91 Yes 48 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87024716 + NM_001143935 CROT 1 1.01 0.22 13 2.7 71.93 38 7.26 Yes 42 1.75 Yes 0 0 No -37 0.57 No 33 81.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 87025231 + NM_001143935 CROT 1 2.33 0.67 33 0.14 61.62 31 5.73 Yes 18 0.31 No 0 0 No -30 0.76 Yes 40 94.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 87027270 + NM_001143935 CROT 1 0.35 0.14 8 8.6 87.57 29 5.47 No 68 1.37 Yes 0 0 No -28 0.85 Yes 42 90.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18867709 + NM_001098482 CRTC1 1 3.54 0.51 31 8.87 82 21 5.83 Yes 59 1.18 Yes 0 0 No -20 0.82 Yes 50 74.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153921377 - NM_181715 CRTC2 1 0.1 0.13 7 6.42 86.13 32 8.18 Yes 19 1.75 Yes 31 0.88 Yes -31 0.78 Yes 39 87.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 153924368 - NM_181715 CRTC2 1 0.39 0.35 20 6.46 86.13 32 4.98 No 3 0.94 Yes 0 0 No -27 0.65 No 43 65.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 153924717 - NM_181715 CRTC2 1 0.41 0.53 29 4.99 77.15 25 5.57 Yes 63 2.5 Yes 0 0 No -51 0.78 Yes 19 94.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153925127 - NM_181715 CRTC2 1 18.03 17.89 72 6.15 80.14 33 8.88 Yes 20 1.25 Yes 32 0.82 Yes -32 0.94 Yes 38 90.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 153925656 - NM_181715 CRTC2 1 0.15 0.18 13 3.43 83.04 57 4.74 No 44 1.7 Yes 0 0 No -29 0.4 No 41 50.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 153926054 - NM_181715 CRTC2 1 0.08 0.1 7 7.41 88.57 26 6 Yes 37 1.01 Yes 0 0 No -52 0.64 No 18 89.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 153927637 - NM_181715 CRTC2 1 1.59 0.93 42 4.07 0 9 3.7 No 22 1.87 Yes 0 0 No -34 0.85 Yes 36 93.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91143539 + NM_022769 CRTC3 1 1.23 0.47 23 8.53 89.57 29 5.46 No 65 1.76 Yes 28 0.92 Yes -28 0.94 Yes 42 97.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 91153577 + NM_022769 CRTC3 1 0.33 0.1 7 6.11 73.92 30 5.97 Yes 17 1.53 Yes 0 0 No -29 0.47 No 41 66.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91157245 + NM_022769 CRTC3 1 0.71 0.22 12 5.8 77.78 25 5.5 No 43 0.08 No 0 0 No -27 0.87 Yes 43 91.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 91161117 + NM_022769 CRTC3 1 11.39 4.15 70 5.9 79.11 31 8.76 Yes 18 1.46 Yes 0 0 No -30 0.81 Yes 40 75.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91172607 + NM_022769 CRTC3 1 0.46 0.33 20 8.7 80.18 29 8.06 Yes 16 1.34 Yes 0 0 No -28 0.86 Yes 42 90.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91185166 + NM_022769 CRTC3 1 45.87 16.79 72 -0.48 73.51 39 7.87 Yes 26 2.23 Yes 35 0.93 Yes -38 0.92 Yes 32 96.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 45882450 + NM_001127457 CRY2 1 0.42 0.13 8 -0.06 0 19 4.24 No 27 0.21 No 18 0.79 Yes -18 0.75 Yes 52 81.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 45883013 + NM_001127457 CRY2 1 0.44 0.1 7 11.77 87.72 23 6.51 Yes 40 2.32 Yes 0 0 No -22 0.79 Yes 48 93.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 45899648 + NM_001127457 CRY2 1 0.38 0.11 7 7.24 77.93 29 8.45 Yes 16 1.7 Yes 0 0 No -28 0.74 Yes 42 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 25852124 + NR_033733 CRYBB2P1 1 0.65 0.19 13 11.54 81.23 15 5.74 Yes 2 0.77 No 0 0 No -28 0.48 No 42 47.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 25853230 + NR_033733 CRYBB2P1 1 0.43 0.13 7 -3.61 0 31 6.98 Yes 28 2.17 Yes 0 0 No -30 0.85 Yes 40 81.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20993224 - NM_015974 CRYL1 1 1.75 0.33 17 8.79 82.84 28 6.38 Yes 76 1.22 Yes 0 0 No -27 0.66 No 43 71.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 21087821 - NM_015974 CRYL1 1 1.69 0.26 15 12.19 97.47 27 9.09 Yes 14 1.2 Yes 0 0 No -26 0.69 Yes 44 81.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 75172886 - NM_001130042 CRYZ 1 0.05 0.14 8 -0.39 69.08 31 6.83 Yes 18 1.02 Yes 0 0 No -30 0.66 No 40 62.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 75185053 - NM_001130042 CRYZ 1 0.07 0.32 19 2.84 0 23 5.83 Yes 42 0.95 Yes 0 0 No -26 0.59 No 40 65.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 75186280 - NM_001130042 CRYZ 1 0.06 0.22 12 8.82 89.7 19 5.48 No 66 1.4 Yes 0 0 No -26 0.6 No 44 54.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 75190512 - NM_001130042 CRYZ 1 0.28 0.15 9 3.75 0 10 4 No 13 1 Yes 0 0 No -25 0.38 No 34 45.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 75190512 - NM_001130042 CRYZ 1 0.18 0.14 8 3.75 0 10 4 No 13 1 Yes 0 0 No -25 0.38 No 34 45.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 75190736 - NM_001130042 CRYZ 1 0.81 0.69 25 4.69 84.88 16 6.69 Yes 3 0.57 No 0 0 No -22 0.61 No 28 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 75190736 - NM_001130042 CRYZ 1 0.44 0.38 18 4.69 84.88 16 6.69 Yes 3 0.57 No 0 0 No -22 0.61 No 28 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 75194017 - NM_001130042 CRYZ 1 0.2 0.17 12 11.97 90.02 35 7.13 Yes 22 0.7 No 0 0 No -25 0.33 No 36 47.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 75197693 - NM_001130042 CRYZ 1 0.3 0.26 16 5.85 82.8 49 6.64 Yes 65 0.24 No 0 0 No -41 0.6 No 29 59.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 75198523 - NM_001130042 CRYZ 1 2.4 2.31 53 10.59 86.84 40 7.21 Yes 27 0.07 No 21 0.5 Yes -28 0.7 Yes 31 76.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34962112 - NM_145858 CRYZL1 1 0.95 0.49 27 10.18 91.22 18 6.08 Yes 5 0.57 No 24 0.71 Yes -24 0.83 Yes 46 87.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34963518 - NM_145858 CRYZL1 1 2.6 0.74 37 5.2 75.2 52 6.96 Yes 1 0.75 No 25 0.64 Yes -55 0.28 No 32 41.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 34963535 - NM_145858 CRYZL1 1 1.01 0.33 19 -2.76 0 35 6.25 Yes 22 0.6 No 25 0.64 Yes -21 0.4 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 34967835 - NM_145858 CRYZL1 1 10.46 2.97 64 10.06 87.27 28 4.21 No 15 0.04 No 27 0.75 Yes -27 0.49 No 46 53.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 34967835 - NM_145858 CRYZL1 1 4.36 1.24 44 10.06 87.27 28 4.21 No 15 0.04 No 27 0.75 Yes -27 0.49 No 46 53.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 34968520 - NM_145858 CRYZL1 1 3.72 1.58 57 8.32 79.67 28 7.94 Yes 30 -1.55 No 27 0.64 Yes -22 0.46 No 46 60.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 34968520 - NM_145858 CRYZL1 1 0.71 0.32 16 8.32 79.67 28 7.94 Yes 30 -1.55 No 27 0.64 Yes -22 0.46 No 46 60.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 34971592 - NM_145858 CRYZL1 1 7.39 4.06 69 4.89 72.53 51 7.94 Yes 11 1.28 Yes 23 0.79 Yes -50 0.94 Yes 20 98.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34973641 - NM_145858 CRYZL1 1 0.87 0.5 28 4.15 79.63 48 5.93 Yes 23 0.95 Yes 0 0 No -35 0.88 Yes 35 96.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34980734 - NM_145858 CRYZL1 1 0.23 0.11 7 6.61 90.92 28 5.29 No 54 0.41 No 0 0 No -30 0.76 Yes 40 92.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 34988910 - NM_145858 CRYZL1 1 2.75 2.47 61 5.4 80.78 71 5.55 No 4 1.6 Yes 22 0.93 Yes -22 0.61 No 38 35.35 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 34997063 - NM_145858 CRYZL1 1 0.31 0.13 8 -0.72 0 35 7.52 Yes 22 0.76 No 0 0 No -34 0.61 No 36 85.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 35006018 - NM_145858 CRYZL1 1 0.8 0.15 9 4.89 81.97 18 4.5 No 46 -1.8 No 27 0.69 Yes -23 0.59 No 47 53.88 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 35006032 - NM_145858 CRYZL1 1 1.8 0.42 20 7.15 86.86 16 5.38 No 32 -1.81 No 27 0.69 Yes -27 0.52 No 43 68.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 35013612 - NM_145858 CRYZL1 1 2.77 0.47 25 6.54 87.47 35 6.39 Yes 22 0.62 No 34 0.8 Yes -34 0.93 Yes 36 84.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56668659 - NM_004077 CS 1 0.05 0.17 11 -7.12 0 37 10.7 Yes 74 1.37 Yes 0 0 No -36 0.93 Yes 34 88.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56668830 - NM_004077 CS 1 0.04 0.21 13 5.78 79.53 19 6.58 Yes 6 1.39 Yes 0 0 No -24 0.62 No 46 76.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 56668833 - NM_004077 CS 1 0.49 2.36 59 9.81 86.29 16 6.35 Yes 3 1.39 Yes 21 0.64 Yes -21 0.66 No 49 74.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 56669923 - NM_004077 CS 1 0.04 0.19 12 -2.29 0 31 5.48 No 18 0.85 Yes 0 0 No -30 0.9 Yes 40 83.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56669928 - NM_004077 CS 1 0.36 1.54 55 5.63 82.32 26 5 No 13 0.85 Yes 25 0.91 Yes -25 0.92 Yes 45 94.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56677679 - NM_004077 CS 1 0.07 0.24 15 1.66 75.68 25 6.07 Yes 58 0.36 No 38 0.23 Yes -24 0.61 No 41 42.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56679029 - NM_004077 CS 1 0.04 0.15 9 8.96 91.68 31 6.09 Yes 18 0.52 No 0 0 No -23 0.85 Yes 47 82.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56680405 - NM_004077 CS 1 0.72 3.32 69 10.57 91.49 34 4.14 No 47 0.63 No 27 0.51 Yes -20 0.77 Yes 50 57.52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 56685091 - NM_004077 CS 1 0.03 0.17 9 10.12 87.96 17 6.24 Yes 47 -3.17 No 21 0.34 Yes -21 0.36 No 48 55.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56685578 - NM_004077 CS 1 0.67 3.08 64 5.72 79.04 17 5.74 Yes 38 0.33 No 26 0.59 Yes -26 0.66 Yes 44 76.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56692476 - NM_004077 CS 1 1.47 6.36 71 8.03 94.64 17 5.02 No 4 0.49 No 23 0.67 Yes -23 0.63 No 47 57.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 115260863 - NM_001242893 CSDE1 1 0.05 0.63 30 4.2 83.67 42 6.93 Yes 59 0.97 Yes 32 0.86 Yes -33 0.62 No 37 73.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 115262363 - NM_001242893 CSDE1 1 0.01 0.1 7 -9.01 0 21 6.96 Yes 8 0.46 No 0 0 No -20 0.65 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 115262504 - NM_001242893 CSDE1 1 0.02 0.15 9 9.75 93.59 25 5.39 No 41 -2.09 No 0 0 No -24 0.72 Yes 46 78.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 115263359 - NM_001242893 CSDE1 1 0.04 0.4 23 -2.1 0 17 4 No 60 0.62 No 22 0.54 Yes -33 0.52 No 61 28.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 115269709 - NM_001242893 CSDE1 1 0.03 0.44 23 -5.6 81.09 19 4.74 No 6 0.99 Yes 0 0 No -30 0.92 Yes 40 89.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 115273024 - NM_001242893 CSDE1 1 0.03 0.35 21 4.12 75.73 29 5.36 No 55 1.15 Yes 0 0 No -41 0.52 No 29 73.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 115273190 - NM_001242893 CSDE1 1 0.01 0.11 7 7 87.73 26 6.86 Yes 13 0.59 No 0 0 No -25 0.84 Yes 45 85.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 115275490 - NM_001242893 CSDE1 1 0.11 1.64 55 7.39 76.42 38 7.35 Yes 25 0.21 No 0 0 No -27 0.53 No 43 58.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 115276472 - NM_001242893 CSDE1 1 0.01 0.13 9 -6.94 0 14 4 No 44 1.15 Yes 0 0 No -56 0.52 No 14 66.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 115276736 - NM_001242893 CSDE1 1 0.01 0.13 9 -8.8 83.34 32 5.36 No 19 1.33 Yes 0 0 No -34 0.57 No 36 67.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 115276745 - NM_001242893 CSDE1 1 0.02 0.21 12 -1.85 0 23 4.81 No 10 1.36 Yes 31 0.65 Yes -25 0.57 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 115280185 - NM_001242893 CSDE1 1 9.97 133.64 72 8.91 85.15 37 6.32 Yes -4 0.39 No 30 0.53 Yes -30 0.69 Yes 40 73.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 115280676 - NM_001242893 CSDE1 1 0.04 0.53 30 0.11 70.91 16 5.04 No 25 0.6 No 0 0 No -26 0.88 Yes 33 65.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 115292526 - NM_001242893 CSDE1 1 14.39 3.69 66 4.6 80.02 31 6.48 Yes -4 -1.94 No 0 0 No -30 0.75 Yes 40 77.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 115292829 - NM_001242893 CSDE1 1 3451.38 863.11 72 8.58 84.71 24 6.65 Yes 49 1.75 Yes 24 0.85 Yes -24 0.82 Yes 46 82.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 115299510 - NM_001242893 CSDE1 1 9.93 2.43 64 6.78 87.99 26 4.8 No 29 -2.49 No 25 0.85 Yes -25 0.86 Yes 45 84.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 47667740 + NM_001316 CSE1L 1 0.15 0.47 15 5.42 72.64 23 4.86 No 10 0.81 Yes 0 0 No -22 0.85 Yes 48 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47674998 + NM_001316 CSE1L 1 0.05 0.19 10 0.1 0 19 4.23 No 29 0.53 No 25 0.6 Yes -41 0.54 No 29 57.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 47679765 + NM_001316 CSE1L 1 0.07 0.33 17 5.07 74.06 25 5.27 No 35 0.34 No 0 0 No -24 0.54 No 41 72.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 47682710 + NM_001316 CSE1L 1 0.04 0.29 17 7.33 85.78 67 6.71 Yes -2 0.15 No 20 0.71 Yes -30 0.45 No 40 56.97 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 47684290 + NM_001316 CSE1L 1 0.02 0.21 11 7.56 83.64 43 6.77 Yes 69 1.03 Yes 0 0 No -29 0.46 No 41 59.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 47688829 + NM_001316 CSE1L 1 0.05 0.36 19 -7.55 0 15 3.97 No 58 0.56 No 0 0 No -38 0.66 No 32 79.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 47688864 + NM_001316 CSE1L 1 0.33 2.19 62 3.33 78.77 23 4.9 No 37 -3.79 No 0 0 No -22 0.96 Yes 48 95.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47689138 + NM_001316 CSE1L 1 0.03 0.11 7 5.23 84.32 25 5.87 Yes 12 0.89 Yes 0 0 No -24 0.46 No 46 54.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 47691263 + NM_001316 CSE1L 1 0.03 0.18 11 6.02 85.19 23 5.91 Yes 48 0.76 No 0 0 No -20 0.69 Yes 50 70.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47691964 + NM_001316 CSE1L 1 0.06 0.36 21 6.42 86.54 40 6.63 Yes 27 0.83 Yes 0 0 No -39 0.48 No 31 71.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 47692413 + NM_001316 CSE1L 1 0.02 0.13 8 5.9 86.83 14 3.83 No 1 1.25 Yes 0 0 No -47 0.51 No 23 64.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 47701276 + NM_001316 CSE1L 1 0.05 0.31 13 8.95 88.75 13 5.92 Yes 24 -1.66 No 0 0 No -20 0.51 No 50 53.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 47707291 + NM_001316 CSE1L 1 0.03 0.14 8 3.3 69.57 18 4.68 No 33 1.59 Yes 25 0.89 Yes -45 0.73 Yes 25 63.75 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 47711014 + NM_001316 CSE1L 1 0.29 1.61 59 11.71 96.08 26 6.15 Yes 75 1.45 Yes 0 0 No -25 0.73 Yes 45 76.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47712712 + NM_001316 CSE1L 1 2.33 15.03 72 6.47 82.37 25 4.15 No 67 0.96 Yes 24 0.8 Yes -30 0.32 No 37 35.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 110458140 + NM_000757 CSF1 1 0.86 0.56 25 6.84 79.42 29 6.48 Yes 33 1.62 Yes 0 0 No -28 0.84 Yes 42 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 110459918 + NM_000757 CSF1 1 0.6 0.28 16 -0.94 0 28 5.29 No 15 0.16 No 0 0 No -23 0.38 No 43 58.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 110466681 + NM_000757 CSF1 1 0.13 0.11 7 6.59 82.24 25 7.07 Yes 12 1.25 Yes 24 0.9 Yes -24 0.92 Yes 46 89.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 110465870 + NM_000757 CSF1 1 0.39 0.4 18 7.41 81.77 27 6.08 Yes 14 1.96 Yes 0 0 No -26 0.85 Yes 44 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 110466681 + NM_000757 CSF1 1 4.75 3.32 66 6.59 82.24 25 7.07 Yes 12 1.25 Yes 24 0.9 Yes -24 0.92 Yes 46 89.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 110468684 + NM_000757 CSF1 1 3.43 1.67 54 6.1 78.21 14 4.66 No 17 0.89 Yes 29 0.84 Yes -29 0.9 Yes 41 85.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 37325713 + NM_000395 CSF2RB 1 0.36 0.13 9 6.56 79.73 25 5.91 Yes 25 1.15 Yes 0 0 No -28 0.48 No 42 51.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 37326256 + NM_000395 CSF2RB 1 0.69 0.15 9 1 74.91 29 5.66 Yes 60 0.79 Yes 0 0 No -27 0.63 No 43 74.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 37328811 + NM_000395 CSF2RB 1 1.56 0.49 27 5.8 0 25 5.39 No 12 0.91 Yes 0 0 No -24 0.78 Yes 46 72.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 43654771 + NM_018590 CSGALNACT2 1 2.3 0.99 39 2.98 0 37 7.25 Yes 24 1.64 Yes 0 0 No -39 0.5 No 31 81.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 43656887 + NM_018590 CSGALNACT2 1 0.32 0.14 8 8.65 83.83 26 6.77 Yes 36 1.98 Yes 0 0 No -25 0.69 Yes 38 68.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 43657647 + NM_018590 CSGALNACT2 1 14.27 5.38 72 10.84 89.87 21 8.35 Yes 8 1.45 Yes 26 0.69 Yes -20 0.8 Yes 50 69.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 43667431 + NM_018590 CSGALNACT2 1 0.57 0.14 9 9.17 82.93 22 5.83 Yes 9 1.05 Yes 0 0 No -21 0.55 No 49 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 43667431 + NM_018590 CSGALNACT2 1 1.73 0.4 20 9.17 82.93 22 5.83 Yes 9 1.05 Yes 0 0 No -21 0.55 No 49 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 75090977 + NM_004383 CSK 1 0.09 0.53 27 4 74.59 12 5.57 Yes 23 0.8 Yes 19 0.47 Yes -42 0.55 No 20 34.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 75091674 + NM_004383 CSK 1 0.07 0.51 22 -1.46 0 28 5.83 Yes 74 1.59 Yes 0 0 No -27 0.86 Yes 43 76.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 75093007 + NM_004383 CSK 1 0.03 0.17 12 -6.39 0 13 4.36 No 48 0.55 No 18 0.86 Yes -39 0.87 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 75094037 + NM_004383 CSK 1 0.03 0.15 11 -4.82 69.75 31 6.08 Yes 18 -0.41 No 0 0 No -30 0.89 Yes 40 84.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 148878857 - NM_001271742 CSNK1A1 1 0.05 0.15 8 10.78 88.23 33 9.05 Yes 20 1.69 Yes 0 0 No -32 0.76 Yes 38 81.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 148880786 - NM_001271742 CSNK1A1 1 0.17 0.57 28 3.22 70.99 14 5.16 No 61 0.77 No 22 0.62 Yes -22 0.57 No 48 53.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 148880839 - NM_001271742 CSNK1A1 1 0.18 0.58 30 2.34 79.14 21 6.88 Yes 8 0.53 No 0 0 No -20 0.48 No 50 58.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 148884299 - NM_001271742 CSNK1A1 1 0.17 0.57 30 1.91 73.86 58 8.76 Yes 51 0.5 No 0 0 No -26 0.41 No 13 48.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 148890722 - NM_001271742 CSNK1A1 1 0.03 0.18 12 6.36 86.34 23 5.82 Yes 10 0.9 Yes 0 0 No -22 0.89 Yes 48 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 148892740 - NM_001271742 CSNK1A1 1 0.63 0.26 14 -0.55 62.6 21 4.88 No 46 1.59 Yes 25 0.4 Yes -24 0.46 No 34 54.57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 148892740 - NM_001271742 CSNK1A1 1 2.79 1.22 49 -0.55 62.6 21 4.88 No 46 1.59 Yes 25 0.4 Yes -24 0.46 No 34 54.57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 148895290 - NM_001271742 CSNK1A1 1 0.66 0.29 14 4.29 77.2 32 6.86 Yes 19 0.42 No 0 0 No -28 0.53 No 34 59.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 148909283 - NM_001271742 CSNK1A1 1 0.02 0.1 7 5.03 81.38 24 5.05 No 4 0.63 No 0 0 No -24 0.62 No 47 66.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 148911054 - NM_001271742 CSNK1A1 1 0.07 0.26 15 6.57 93.18 28 5.29 No 55 1.31 Yes 0 0 No -27 0.7 Yes 43 31.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 148911075 - NM_001271742 CSNK1A1 1 0.11 0.38 22 2.56 0 47 8.67 Yes 34 1.32 Yes 0 0 No -46 0.85 Yes 24 88.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 148925395 - NM_001271742 CSNK1A1 1 0.14 0.58 29 4.85 80.39 17 4.69 No 19 0.4 No 0 0 No -23 0.39 No 47 58.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 148929074 - NM_001271742 CSNK1A1 1 0.04 0.18 11 4.16 84.26 35 5.91 Yes 58 1.26 Yes 0 0 No -34 0.78 Yes 36 88.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 148929077 - NM_001271742 CSNK1A1 1 0.88 3.5 67 6.41 78.78 32 5.72 Yes 55 1.25 Yes 31 0.86 Yes -31 0.88 Yes 39 89.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80203006 - NM_139062 CSNK1D 1 0.37 0.39 25 4.99 0 22 4.56 No 55 1.08 Yes 18 0.47 Yes -21 0.71 Yes 49 49.12 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 80203911 - NM_139062 CSNK1D 1 0.12 0.13 9 1 0 34 5.69 Yes 21 1.1 Yes 0 0 No -29 0.43 No 37 70.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 80204310 - NM_139062 CSNK1D 1 1.62 1.78 55 4.8 80.81 27 6.11 Yes 72 1.17 Yes 26 0.66 Yes -26 0.81 Yes 44 84.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80204342 - NM_139062 CSNK1D 1 0.19 0.21 10 5.74 80.12 27 5.2 No 40 1.16 Yes 26 0.66 Yes -24 0.67 Yes 46 55.22 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 80208056 - NM_139062 CSNK1D 1 1.62 3.04 63 7.15 85.09 20 5.1 No 7 -0.93 No 23 0.68 Yes -23 0.72 Yes 47 83.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80209351 - NM_139062 CSNK1D 1 0.2 0.58 29 -0.87 64.95 34 7.87 Yes 21 0.8 Yes 0 0 No -33 0.54 No 30 59.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80210404 - NM_139062 CSNK1D 1 1.24 2.17 66 9.81 88.85 34 7.74 Yes 21 0.85 Yes 24 0.9 Yes -24 0.62 No 37 89.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 80210404 - NM_139062 CSNK1D 1 0.84 1.49 49 9.81 88.85 34 7.74 Yes 21 0.85 Yes 24 0.9 Yes -24 0.62 No 37 89.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 80213205 - NM_139062 CSNK1D 1 0.07 0.17 11 5.1 81.39 51 7.32 Yes 71 0.96 Yes 24 0.44 Yes -24 0.47 No 46 63.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 80214382 - NM_139062 CSNK1D 1 1.04 0.92 38 10.11 98.73 30 7.66 Yes 74 1.51 Yes 0 0 No -29 0.76 Yes 41 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 80224768 - NM_139062 CSNK1D 1 0.09 0.14 9 3.25 80.12 21 5.66 Yes 75 1.07 Yes 22 0.61 Yes -20 0.69 Yes 50 84.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80224771 - NM_139062 CSNK1D 1 0.06 0.1 7 5.2 85.02 18 5.39 No 5 1.09 Yes 22 0.61 Yes -22 0.6 No 53 77.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 80225211 - NM_139062 CSNK1D 1 0.2 0.25 12 8.48 90.52 28 4.55 No 10 1.3 Yes 0 0 No -27 0.82 Yes 43 90.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80230193 - NM_139062 CSNK1D 1 0.13 0.18 10 6.39 90.92 28 5.29 No 33 0.93 Yes 27 0.89 Yes -27 0.56 No 16 86.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 38688550 - NM_152221 CSNK1E 1 1.2 0.51 24 8.58 78.26 42 5.43 No 23 -1.12 No 25 0.51 Yes -35 0.68 Yes 35 64.55 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 38691454 - NM_152221 CSNK1E 1 7.41 7.44 72 8.97 86.57 25 4.9 No 12 0.47 No 24 0.95 Yes -24 0.96 Yes 46 95.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38692693 - NM_152221 CSNK1E 1 3.9 4.13 69 7.49 93.81 20 4.98 No 37 -1.29 No 23 0.79 Yes -23 0.67 Yes 47 66.95 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 38693275 - NM_152221 CSNK1E 1 0.22 0.22 14 8.93 92.32 18 4.9 No 63 1.77 Yes 0 0 No -20 0.48 No 53 54.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 38694210 - NM_152221 CSNK1E 1 7.15 7.1 72 2.65 74.94 38 5.7 Yes 6 0.44 No 30 0.6 Yes -30 0.57 No 40 69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 38696953 - NM_152221 CSNK1E 1 0.15 0.24 14 2.11 0 31 7.21 Yes 18 0.33 No 0 0 No -30 0.71 Yes 40 64.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 38699037 - NM_152221 CSNK1E 1 0.24 0.24 16 6.9 78.07 12 7.27 Yes -1 1.26 Yes 26 0.94 Yes -21 0.73 Yes 59 26.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 38699426 - NM_152221 CSNK1E 1 0.23 0.17 10 12.64 94.53 18 5.43 No 5 2.68 Yes 0 0 No -26 0.9 Yes 44 91.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64473630 - NM_001329605 CSNK1G1 1 1.88 0.17 12 8.57 81.81 32 7 Yes 34 0.08 No 0 0 No -31 0.86 Yes 39 90.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64480688 - NM_001329605 CSNK1G1 1 1.38 0.17 11 0.37 68.59 45 9.1 Yes 32 1.43 Yes 22 0.77 Yes -44 0.79 Yes 26 87.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 64531367 - NM_001329605 CSNK1G1 1 0.16 0.15 10 5.3 76.74 113 8.17 Yes 19 1.14 Yes 0 0 No -31 0.76 Yes 39 81.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64558114 - NM_001329605 CSNK1G1 1 1.07 1.31 49 10.73 95.2 22 7.16 Yes 26 1.33 Yes 21 0.8 Yes -21 0.91 Yes 49 95.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 64572168 - NM_001329605 CSNK1G1 1 0.27 0.29 15 4.21 84.41 34 9.32 Yes 32 0.22 No 0 0 No -33 0.71 Yes 37 70.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64591364 - NM_001329605 CSNK1G1 1 0.27 0.28 18 10.32 81.62 24 5.38 No 11 1.03 Yes 0 0 No -23 0.8 Yes 47 85.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64626771 - NM_001329605 CSNK1G1 1 0.22 0.18 9 7.67 83.58 22 4.97 No 19 0.57 No 0 0 No -38 0.22 No 46 47.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 64634885 - NM_001329605 CSNK1G1 1 0.96 0.63 24 4.66 74.28 44 7.48 Yes 31 0.73 No 0 0 No -29 0.68 Yes 41 69.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64640041 - NM_001329605 CSNK1G1 1 0.53 0.39 20 4.92 85.22 17 6.93 Yes 4 1.2 Yes 0 0 No -29 0.48 No 54 58.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1975107 + NM_001319 CSNK1G2 1 1.34 1.58 52 4.49 86.16 22 4.64 No 39 -0.45 No 0 0 No -21 0.93 Yes 49 80.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1978308 + NM_001319 CSNK1G2 1 0.38 0.44 19 -3.41 0 25 7.55 Yes 12 1.54 Yes 0 0 No -24 0.76 Yes 46 93.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1978641 + NM_001319 CSNK1G2 1 0.91 0.61 33 -0.84 57.7 30 6 Yes 17 0.61 No 0 0 No -29 0.83 Yes 41 39.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1979166 + NM_001319 CSNK1G2 1 0.35 0.35 20 -0.62 0 29 5.92 Yes 16 0.92 Yes 0 0 No -28 0.87 Yes 42 82.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 122885921 + NM_001270572 CSNK1G3 1 3.73 6.04 72 3.54 73.28 36 5.74 Yes 73 -3.33 No 0 0 No -35 0.62 No 35 51.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 122915927 + NM_001270572 CSNK1G3 1 0.41 0.39 21 6.26 84.24 33 6.18 Yes 20 1.73 Yes 0 0 No -36 0.79 Yes 34 84.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 122926106 + NM_001270572 CSNK1G3 1 163.55 78.29 72 0.5 75.9 23 6.24 Yes 10 0.31 No 24 0.5 Yes -27 0.41 No 38 55.98 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 122930732 + NM_001270572 CSNK1G3 1 3.6 3.58 68 0.53 62 55 8.49 Yes 42 0.44 No 27 0.38 Yes -54 0.67 Yes 16 91.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 480218 - NM_177559 CSNK2A1 1 0.04 0.17 11 4.25 83.84 30 6.44 Yes 7 1.03 Yes 0 0 No -29 0.74 Yes 41 79.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 480275 - NM_177559 CSNK2A1 1 0.3 1.39 50 8.93 90.3 25 5.29 No -2 0.29 No 24 0.73 Yes -24 0.81 Yes 46 92.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 480760 - NM_177559 CSNK2A1 1 0.05 0.15 10 -1.9 62.47 18 5.02 No 53 0.8 Yes 0 0 No -39 0.51 No 36 44.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 489250 - NM_177559 CSNK2A1 1 0.17 0.11 7 2.61 75.1 25 5 No 24 0.68 No 20 0.42 Yes -24 0.94 Yes 46 84.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 490983 - NM_177559 CSNK2A1 1 0.34 0.25 13 -2.56 48.07 41 6.13 Yes 32 1.1 Yes 25 0.38 Yes -40 0.3 No 30 39.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 490983 - NM_177559 CSNK2A1 1 0.77 0.6 32 -2.56 48.07 41 6.13 Yes 32 1.1 Yes 25 0.38 Yes -40 0.3 No 30 39.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 507434 - NM_177559 CSNK2A1 1 0.12 0.11 8 4.91 85.02 18 5.39 No 5 1.09 Yes 0 0 No -22 0.63 No 53 71.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 58193656 - NM_001896 CSNK2A2 1 1.57 1.5 48 11.93 90.28 31 5.74 Yes 76 -3 No 0 0 No -26 0.61 No 44 76.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 58204399 - NM_001896 CSNK2A2 1 0.03 0.11 7 8.23 80.5 22 4.84 No 29 -2.36 No 0 0 No -22 0.8 Yes 48 58.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 58208403 - NM_001896 CSNK2A2 1 0.05 0.15 10 1.82 0 15 4.57 No 28 1.15 Yes 0 0 No -45 0.54 No 25 66.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 58218643 - NM_001896 CSNK2A2 1 0.05 0.18 13 7.29 82.21 36 4.51 No 28 0.66 No 0 0 No -35 0.55 No 35 67.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 58220757 - NM_001896 CSNK2A2 1 1.35 4 70 -0.59 0 25 4.97 No 62 1.48 Yes 0 0 No -31 0.82 Yes 39 89.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 67987040 + NM_024790 CSPP1 1 9.03 2.17 60 3.09 0 25 9.3 Yes 12 0.8 Yes 30 0.79 Yes -30 0.81 Yes 40 83.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 67990601 + NM_024790 CSPP1 1 1.54 0.32 18 3.84 0 23 8.51 Yes 10 1.28 Yes 0 0 No -39 0.73 Yes 31 78.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 68002544 + NM_024790 CSPP1 1 1.44 0.17 10 2.32 0 29 6.35 Yes 16 1.46 Yes 0 0 No -28 0.53 No 42 76.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 68004037 + NM_024790 CSPP1 1 88.94 11.24 72 4.78 77.88 30 6.4 Yes 17 0.52 No 29 0.6 Yes -29 0.73 Yes 41 78.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 68005782 + NM_024790 CSPP1 1 0.74 0.1 7 -2.12 0 33 6.84 Yes 20 0.95 Yes 0 0 No -32 0.87 Yes 38 91.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 68026563 + NM_024790 CSPP1 1 0.65 0.19 12 0.94 75.21 41 5.47 No 28 1.08 Yes 0 0 No -35 0.46 No 35 61.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 68027431 + NM_024790 CSPP1 1 0.81 0.24 16 7.92 85.43 15 5.65 Yes 2 2.33 Yes 0 0 No -22 0.47 No 39 82.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 68033113 + NM_024790 CSPP1 1 10.11 1.68 56 2.82 0 53 6.51 Yes 40 1.6 Yes 0 0 No -33 0.93 Yes 37 90 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 68046258 + NM_024790 CSPP1 1 0.56 0.13 8 6.88 82.54 37 6.16 Yes 24 1.72 Yes 0 0 No -36 0.91 Yes 34 96.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 68074872 + NM_024790 CSPP1 1 0.54 0.15 9 7.64 85.02 32 6.71 Yes 0 0.81 Yes 0 0 No -31 0.77 Yes 39 74.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 68085003 + NM_024790 CSPP1 1 1.72 0.44 22 -5.48 81.15 18 5.79 Yes 5 2.04 Yes 21 0.85 Yes -21 0.75 Yes 49 71.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 68104923 + NM_024790 CSPP1 1 1.95 0.28 14 6.56 89.82 37 4.47 No 10 0.7 No 0 0 No -22 0.55 No 52 56.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 51458891 - NM_030809 CSRNP2 1 0.64 0.17 11 7.88 87.33 25 6.63 Yes 12 1.78 Yes 0 0 No -24 0.95 Yes 46 94.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 51476478 - NM_030809 CSRNP2 1 9.51 0.44 24 8.05 88.29 15 5.2 No 68 1.67 Yes 20 0.57 Yes -20 0.8 Yes 50 91.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 54974195 + NM_001033522 CSTF1 1 0.11 0.15 9 5.35 66.39 47 4.74 No 58 0.18 No 0 0 No -24 0.61 No 46 63.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 100081673 + NM_001306206 CSTF2 1 2.93 2.65 65 0.88 0 19 4.47 No 6 0.41 No 18 0.87 Yes -18 0.94 Yes 52 93.04 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 33107530 - NM_001326 CSTF3 1 0.08 0.17 12 3.7 0 11 3.87 No 15 0.84 Yes 0 0 No -27 0.9 Yes 43 93.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 33113104 - NM_001326 CSTF3 1 0.09 0.11 7 7.65 74.8 25 6.7 Yes 12 1.4 Yes 0 0 No -24 0.79 Yes 46 74.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 33127609 - NM_001326 CSTF3 1 0.11 0.15 11 -1.91 77.99 64 5.48 No 3 0.54 No 0 0 No -31 0.63 No 39 67.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 33133794 - NM_001326 CSTF3 1 0.24 0.35 22 10.11 91.96 27 5.76 Yes 14 1.12 Yes 0 0 No -26 0.42 No 44 63.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 33140292 - NM_001326 CSTF3 1 0.1 0.14 8 12.19 88.27 28 6.75 Yes 15 1.21 Yes 0 0 No -27 0.78 Yes 43 83.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 33157759 - NM_001326 CSTF3 1 0.11 0.14 9 5.89 73.63 25 5.57 Yes 24 0.2 No 28 0.69 Yes -28 0.92 Yes 42 94.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 33163529 - NM_001326 CSTF3 1 0.42 0.74 39 5.05 0 36 5.99 Yes 23 1.3 Yes 0 0 No -25 0.84 Yes 45 81.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 33166520 - NM_001326 CSTF3 1 0.11 0.19 9 4.64 85.05 22 5.15 No 30 0.33 No 22 0.72 Yes -22 0.46 No 41 55.69 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 33178350 - NM_001326 CSTF3 1 1.86 3.14 67 7.65 84.63 27 5.92 Yes 70 0.41 No 26 0.43 Yes -26 0.61 No 36 62.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 1206215 - NM_001012614 CTBP1 1 36.08 38.94 72 2.23 75.2 21 6.16 Yes 8 1.01 Yes 20 0.92 Yes -20 0.94 Yes 50 93.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1207073 - NM_001012614 CTBP1 1 0.09 0.21 12 7.28 87.07 28 4.43 No -4 0.1 No 0 0 No -27 0.81 Yes 43 66.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 1207328 - NM_001012614 CTBP1 1 0.1 0.35 19 3.29 70.95 30 6.19 Yes 76 1.48 Yes 0 0 No -29 0.87 Yes 41 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1207388 - NM_001012614 CTBP1 1 0.03 0.11 8 0.92 0 9 3.87 No 16 1.51 Yes 0 0 No -28 0.85 Yes 42 83.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1215628 - NM_001012614 CTBP1 1 0.09 0.21 11 4.95 71.6 75 7.66 Yes 66 2.46 Yes 18 0.4 Yes -38 0.31 No 52 40.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 1217301 - NM_001012614 CTBP1 1 0.12 0.28 16 6.43 77.72 33 7.28 Yes 20 1.53 Yes 32 0.84 Yes -32 0.93 Yes 38 90.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1227379 - NM_001012614 CTBP1 1 0.05 0.15 11 7.55 82.32 38 6.21 Yes 25 0.76 No 0 0 No -37 0.63 No 33 61.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 1231721 - NM_001012614 CTBP1 1 0.04 0.11 7 8.46 84.42 38 6.08 Yes 60 -3.72 No 0 0 No -28 0.86 Yes 42 85.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 1235304 - NM_001012614 CTBP1 1 0.38 0.29 20 -4.37 0 31 8.17 Yes 18 1.03 Yes 0 0 No -30 0.77 Yes 40 79.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85020199 - NM_004388 CTBS 1 0.24 0.11 8 9.29 85.43 24 4.13 No 18 -2 No 0 0 No -21 0.83 Yes 49 62.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 85029598 - NM_004388 CTBS 1 7.04 3.35 69 7.8 82.81 24 6.1 Yes 11 0.1 No 0 0 No -26 0.7 Yes 44 48.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 85029988 - NM_004388 CTBS 1 0.82 0.39 18 9.03 77.79 30 6.93 Yes 37 0.99 Yes 0 0 No -29 0.92 Yes 41 95.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85031710 - NM_004388 CTBS 1 0.88 0.38 19 -8.44 0 69 7.39 Yes 61 -5.06 No 24 0.35 Yes -30 0.48 No 29 20.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 8133241 - NM_025099 CTC1 1 2.96 1.6 52 5.1 84.89 42 7.38 Yes 56 1.47 Yes 41 0.73 Yes -41 0.85 Yes 29 92.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8135355 - NM_025099 CTC1 1 0.31 0.13 7 10.69 92.3 19 3.95 No 6 0.74 No 0 0 No -28 0.82 Yes 42 75.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 8139307 - NM_025099 CTC1 1 0.48 0.14 8 -19.66 0 17 4 No 54 -3.63 No 24 0.82 Yes -17 0.52 No 35 25.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 8139665 - NM_025099 CTC1 1 2.63 1.57 51 0.63 69.63 23 7.07 Yes 10 0.3 No 26 0.9 Yes -22 0.85 Yes 48 88.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8140733 - NM_025099 CTC1 1 5.52 1.92 56 10.46 79.99 23 4.67 No 10 0.73 No 22 0.92 Yes -22 0.93 Yes 48 94.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8141487 - NM_025099 CTC1 1 0.33 0.18 10 9.26 87.62 17 5.2 No 4 0.63 No 0 0 No -20 0.66 Yes 50 78.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 8141897 - NM_025099 CTC1 1 0.5 0.31 18 4.5 80.67 23 5.1 No 10 1.26 Yes 0 0 No -22 0.96 Yes 48 96.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8141932 - NM_025099 CTC1 1 0.19 0.13 8 2 0 26 5 No 13 0.49 No 0 0 No -25 0.68 Yes 52 45.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 8141937 - NM_025099 CTC1 1 0.24 0.15 11 0.06 0 21 4.47 No 8 0.52 No 0 0 No -20 0.78 Yes 50 49.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 8150034 - NM_025099 CTC1 1 0.42 0.11 8 1.98 0 35 6.78 Yes 22 1 Yes 0 0 No -34 0.97 Yes 36 96.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67623519 + NM_006565 CTCF 1 0.97 0.82 36 9.38 88.3 37 5.04 No 32 0.41 No 0 0 No -34 0.67 Yes 36 76.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67669417 + NM_006565 CTCF 1 0.08 0.22 13 0.69 0 60 6.42 Yes 47 0.47 No 0 0 No -49 0.77 Yes 21 83.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67671596 + NM_006565 CTCF 1 8.43 9.06 72 -1.35 0 9 3.87 No 31 0.93 Yes 0 0 No -39 0.61 No 31 68.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7147656 - NM_015343 CTDNEP1 1 0.09 0.49 24 4.41 69.01 25 7.04 Yes 66 0.2 No 0 0 No -24 0.91 Yes 46 79.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7148015 - NM_015343 CTDNEP1 1 0.02 0.13 8 2.08 72.25 23 5.05 No 10 1.08 Yes 0 0 No -28 0.83 Yes 42 83.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7148018 - NM_015343 CTDNEP1 1 0.16 0.94 43 4.04 76.61 20 4.89 No 7 1.11 Yes 0 0 No -25 0.84 Yes 45 83.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7149282 - NM_015343 CTDNEP1 1 0.02 0.1 7 0.85 0 18 4.58 No 5 0.15 No 0 0 No -17 0.9 Yes 53 86.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7150140 - NM_015343 CTDNEP1 1 0.1 0.51 26 -0.87 77.13 37 6.4 Yes 61 1.02 Yes 0 0 No -26 0.31 No 34 44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7150497 - NM_015343 CTDNEP1 1 0.37 1.42 53 2.45 0 34 6.04 Yes 21 0.06 No 0 0 No -33 0.59 No 37 72.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7150654 - NM_015343 CTDNEP1 1 0.07 0.28 18 -6.1 0 18 4.24 No 21 0.11 No 0 0 No -45 0.69 Yes 37 63.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 77470354 + NM_048368 CTDP1 1 0.21 0.17 7 1.71 0 12 3.7 No 23 1.13 Yes 0 0 No -35 0.71 Yes 35 85.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 77476859 + NM_048368 CTDP1 1 0.27 0.14 9 4.6 86.26 24 5.1 No 75 1.92 Yes 0 0 No -23 0.87 Yes 47 91.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 77478246 + NM_048368 CTDP1 1 1.15 0.15 11 -0.74 67.98 22 8.72 Yes 9 -0.61 No 0 0 No -21 0.66 No 49 55.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 77484047 + NM_048368 CTDP1 1 0.7 0.11 7 6.22 78.44 14 5.74 Yes 50 1.09 Yes 0 0 No -26 0.84 Yes 44 82.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 77488906 + NM_048368 CTDP1 1 302.35 33.49 72 8.31 80.22 37 6.69 Yes 24 1.98 Yes 27 0.87 Yes -27 0.8 Yes 43 90.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 219266836 + NM_021198 CTDSP1 1 208.7 89.26 72 6.55 80.22 27 4.43 No NA NA NA 23 0.84 Yes -22 0.82 Yes 48 56.18 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 219267075 + NM_021198 CTDSP1 1 0.15 0.17 9 1.38 0 27 5.48 No NA NA NA 0 0 No -26 0.82 Yes 44 65.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 219267931 + NM_021198 CTDSP1 1 0.15 0.21 12 2.69 77.28 17 5.61 Yes 66 -0.76 No 19 0.67 Yes -25 0.38 No 14 35.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 219268978 + NM_021198 CTDSP1 1 0.09 0.15 10 4.7 82.51 33 5.92 Yes 70 -4.1 No 24 0.92 Yes -30 0.92 Yes 40 87.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58217789 - NM_005730 CTDSP2 1 2.34 3.94 69 7.46 82.16 21 5.2 No 8 0.17 No 20 0.56 Yes -25 0.44 No 50 69.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 58220907 - NM_005730 CTDSP2 1 0.34 0.39 22 1.26 0 38 6.12 Yes 63 0.88 Yes 23 0.67 Yes -23 0.7 Yes 47 48.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 58220911 - NM_005730 CTDSP2 1 1.33 1.64 51 5.16 81.39 34 5.79 Yes 59 0.88 Yes 23 0.67 Yes -19 0.58 No 37 38.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 58222177 - NM_005730 CTDSP2 1 0.22 0.28 17 5.8 90.92 28 5.29 No 36 1.5 Yes 0 0 No -27 0.41 No 21 70.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 58222202 - NM_005730 CTDSP2 1 0.66 1.04 44 4.74 84.41 24 6.69 Yes 11 1.53 Yes 0 0 No -24 0.44 No 46 62.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 44756233 + NM_016396 CTDSPL2 1 0.12 0.13 8 -0.03 0 9 3.87 No 11 0.03 No 0 0 No -30 0.53 No 40 79.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 44762666 + NM_016396 CTDSPL2 1 0.68 0.64 31 7.85 84.5 29 8.06 Yes 76 0.76 No 28 0.79 Yes -28 0.89 Yes 42 95.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 44776425 + NM_016396 CTDSPL2 1 0.33 0.32 19 -5.02 0 35 6.4 Yes 22 0.61 No 0 0 No -34 0.95 Yes 36 95.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44778751 + NM_016396 CTDSPL2 1 3.7 4.69 72 3.39 80.73 28 6.27 Yes 15 1.25 Yes 0 0 No -27 0.79 Yes 43 81.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44789259 + NM_016396 CTDSPL2 1 0.18 0.21 10 4.46 74.87 44 6.56 Yes 31 0.47 No 0 0 No -25 0.56 No 31 48.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 44794159 + NM_016396 CTDSPL2 1 5.96 5.96 72 7.24 85.92 20 4.21 No 7 0.99 Yes 30 0.59 Yes -30 0.63 No 40 47.13 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 44795621 + NM_016396 CTDSPL2 1 4.45 4.46 71 3.42 71.12 22 3.79 No 73 0.66 No 21 0.89 Yes -26 0.61 No 44 82.38 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 44795636 + NM_016396 CTDSPL2 1 1.35 1.28 50 9.83 91.68 18 4.9 No 25 -1.47 No 0 0 No -21 0.79 Yes 49 86.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44810851 + NM_016396 CTDSPL2 1 0.37 0.43 22 5.88 82.8 68 7.99 Yes 55 0.29 No 25 0.83 Yes -25 0.82 Yes 45 60.6 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 70888897 + NM_001902 CTH 1 0.55 0.18 10 8.1 91.62 20 6.54 Yes 7 1.17 Yes 0 0 No -24 0.45 No 46 52.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 46244669 + NM_014772 CTIF 1 1.59 0.17 11 6.62 80.54 23 6.08 Yes 10 1.97 Yes 0 0 No -22 0.85 Yes 48 93.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 46283295 + NM_014772 CTIF 1 1.45 0.14 7 9.1 81.62 28 7.32 Yes 34 1.37 Yes 0 0 No -27 0.64 No 37 57.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 138216730 + NM_001290309 CTNNA1 1 0.04 0.11 8 4.56 71.77 26 6 Yes 75 -3.23 No 18 0.74 Yes -18 0.49 No 45 73.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 138260200 + NM_001290309 CTNNA1 1 0.1 0.14 8 0.28 77.59 28 6.51 Yes 15 1.15 Yes 22 0.54 Yes -27 0.92 Yes 43 96.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 138268576 + NM_001290309 CTNNA1 1 0.33 0.63 35 9.14 83.17 16 5.79 Yes 3 0.19 No 29 0.51 Yes -29 0.57 No 41 54.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 138269517 + NM_001290309 CTNNA1 1 0.32 0.6 30 5.77 85.87 16 5.29 No 37 1.1 Yes 0 0 No -23 0.36 No 21 41.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 111705109 - NM_003798 CTNNAL1 1 2.22 2.63 63 3.06 0 9 3.87 No 14 1.53 Yes 0 0 No -26 0.87 Yes 44 95.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 111705152 - NM_003798 CTNNAL1 1 6.68 8.04 72 9.78 94.48 22 5.41 No 1 0.78 Yes 22 0.81 Yes -26 0.57 No 44 87.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 111714147 - NM_003798 CTNNAL1 1 1.18 0.81 33 6.46 79.98 31 6 Yes 48 1.33 Yes 0 0 No -30 0.57 No 40 60.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 111714147 - NM_003798 CTNNAL1 1 0.36 0.25 15 6.46 79.98 31 6 Yes 48 1.33 Yes 0 0 No -30 0.57 No 40 60.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 111714772 - NM_003798 CTNNAL1 1 0.79 1.1 41 -1 69.91 28 5.66 Yes 9 0.74 No 0 0 No -32 0.31 No 38 53.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 111741781 - NM_003798 CTNNAL1 1 0.25 0.17 8 1.52 55.56 19 6.06 Yes 2 0.01 No 23 0.67 Yes -14 0.51 No 56 65.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 41265680 + NM_001904 CTNNB1 1 0.32 0.93 43 6.73 88.6 40 6.78 Yes 27 1.09 Yes 39 0.55 Yes -39 0.76 Yes 31 87.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 41266446 + NM_001904 CTNNB1 1 0.06 0.25 16 -12.06 0 14 5.12 No 6 0.5 No 0 0 No -25 0.86 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 41266593 + NM_001904 CTNNB1 1 0.1 0.43 24 3.23 73.93 30 5.48 No 35 0.84 Yes 0 0 No -29 0.66 No 41 89.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 41277217 + NM_001904 CTNNB1 1 0.07 0.19 13 -14.59 79 23 6.85 Yes 10 1.37 Yes 0 0 No -22 0.89 Yes 48 88.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 41281150 + NM_001904 CTNNB1 1 0.17 0.68 33 10.83 87.38 27 5.29 No 36 1.25 Yes 26 0.89 Yes -26 0.6 No 44 65.07 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 41281309 + NM_001904 CTNNB1 1 0.16 0.65 29 3.62 83.43 31 4.83 No 53 1.48 Yes 30 0.53 Yes -30 0.6 No 40 75.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 9931038 - NM_020248 CTNNBIP1 1 0.35 0.13 7 9.49 89.95 20 6.24 Yes 7 1.36 Yes 0 0 No -19 0.65 No 51 85.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 9932451 - NM_020248 CTNNBIP1 1 0.97 0.17 12 6.18 73.87 9 5.66 Yes 68 -2.83 No 0 0 No -25 0.57 No 42 76.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 9935488 - NM_020248 CTNNBIP1 1 0.74 0.18 11 -1.07 79.15 21 4.69 No 22 -2.6 No 0 0 No -20 0.95 Yes 50 90.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 9935679 - NM_020248 CTNNBIP1 1 0.86 0.19 10 5.78 92.69 21 4.9 No 53 1.1 Yes 0 0 No -24 0.8 Yes 46 88.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36323328 + NM_030877 CTNNBL1 1 1.66 1.99 55 9.62 85.09 29 5.38 No 28 1.74 Yes 29 0.54 Yes -29 0.4 No 41 61.92 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 36323781 + NM_030877 CTNNBL1 1 0.16 0.19 12 6.17 79.84 20 6.82 Yes 7 1.01 Yes 0 0 No -19 0.58 No 51 85.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 36344699 + NM_030877 CTNNBL1 1 0.09 0.13 7 6.16 75.08 32 6.08 Yes 20 -2.91 No 0 0 No -31 0.9 Yes 39 93.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 36353338 + NM_030877 CTNNBL1 1 0.49 0.64 32 4.19 0 33 6.94 Yes 20 0.55 No 0 0 No -32 0.7 Yes 38 82.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 36355703 + NM_030877 CTNNBL1 1 0.13 0.15 9 10.23 97.06 15 4.84 No 2 0.42 No 28 0.8 Yes -28 0.9 Yes 42 95.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 36388071 + NM_030877 CTNNBL1 1 0.42 0.6 29 7.77 94.81 19 4.51 No 72 0.58 No 0 0 No -56 0.45 No 43 45.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 36460649 + NM_030877 CTNNBL1 1 0.08 0.15 9 8.83 95.98 27 5.38 No 73 -5.4 No 27 0.24 Yes -27 0.64 No 43 63.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 36482796 + NM_030877 CTNNBL1 1 0.09 0.15 10 9.75 90.98 29 6.9 Yes 47 1.34 Yes 0 0 No -28 0.42 No 42 77.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 3550675 + NM_004937 CTNS 1 0.56 0.14 9 1.16 72.22 24 4.28 No 51 -3.93 No 0 0 No -23 0.64 No 47 55.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 3551031 + NM_004937 CTNS 1 0.86 0.24 15 9.01 91.75 22 3.81 No 21 2.13 Yes 0 0 No -21 0.8 Yes 49 83.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3553467 + NM_004937 CTNS 1 1.28 0.39 20 0.57 64.67 52 8.22 Yes 75 -3.39 No 25 0.64 Yes -34 0.54 No 36 60.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 41446557 + NM_001905 CTPS1 1 0.75 0.92 38 9.99 82.12 26 7.96 Yes 13 1.71 Yes 0 0 No -25 0.95 Yes 45 95.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 41463067 + NM_001905 CTPS1 1 0.04 0.11 8 -16.15 0 33 6.48 Yes 5 1.23 Yes 0 0 No -32 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 41465501 + NM_001905 CTPS1 1 0.2 0.54 24 1.17 79.3 18 6.8 Yes 5 0.9 Yes 0 0 No -28 0.43 No 45 41.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 41467814 + NM_001905 CTPS1 1 0.05 0.1 7 -5.41 0 10 5.1 No 73 -5.25 No 31 0.17 Yes -22 0.31 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 16709762 - NM_001144002 CTPS2 1 0.17 0.11 7 2.77 75.82 24 4.77 No 11 0.65 No 21 0.83 Yes -23 0.75 Yes 47 86.27 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 16711343 - NM_001144002 CTPS2 1 0.17 0.13 9 2.37 0 28 6.56 Yes 15 1.98 Yes 0 0 No -27 0.8 Yes 43 94.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 16718678 - NM_001144002 CTPS2 1 0.46 0.17 10 3.41 0 27 7.79 Yes 14 0.82 Yes 0 0 No -29 0.8 Yes 41 86.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 10774198 + NM_014633 CTR9 1 0.09 0.11 8 -16.44 0 10 4 No 46 -4.29 No 23 0.8 Yes -43 0.28 No 61 18.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 10794070 + NM_014633 CTR9 1 0.16 0.24 13 -0.47 0 50 6.07 Yes 46 0.97 Yes 0 0 No -38 0.48 No 34 67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 10794641 + NM_014633 CTR9 1 0.13 0.13 8 -3.22 0 17 2.85 No 14 0.71 No 34 0.52 Yes -19 0.88 Yes 44 48.93 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 11704126 - NM_147780 CTSB 1 0.29 0.18 10 6.91 82.55 32 7.94 Yes 19 2.06 Yes 0 0 No -31 0.81 Yes 39 94.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 11706725 - NM_147780 CTSB 1 0.37 0.15 9 -1.02 68.44 16 4.69 No 24 0.52 No 0 0 No -36 0.9 Yes 34 75.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 11708488 - NM_147780 CTSB 1 0.18 0.13 7 -9.41 74.54 25 4.32 No 12 0.64 No 0 0 No -25 0.74 Yes 46 64.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 88027644 - NM_001814 CTSC 1 0.3 1.25 46 8.05 87.11 28 5.74 Yes 45 1.39 Yes 0 0 No -27 0.56 No 43 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 88049643 - NM_001814 CTSC 1 0.12 0.54 25 6.88 81.27 48 4.94 No 35 1.16 Yes 0 0 No -30 0.79 Yes 40 78.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 88059568 - NM_001814 CTSC 1 0.42 1.74 52 3.11 78.3 23 5.39 No 56 1.83 Yes 22 0.8 Yes -22 0.87 Yes 48 87.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 88059612 - NM_001814 CTSC 1 3.76 15.89 72 5.7 83.32 25 5.1 No 12 1.87 Yes 24 0.93 Yes -25 0.68 Yes 46 86.44 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 88061329 - NM_001814 CTSC 1 0.21 0.85 40 7.28 86.24 22 4.5 No 14 1.23 Yes 0 0 No -21 0.65 No 49 56.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 88061365 - NM_001814 CTSC 1 120.46 490.15 72 6.82 80.65 31 5.65 Yes 65 1.8 Yes 24 0.82 Yes -26 0.54 No 44 69.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 88061365 - NM_001814 CTSC 1 0.09 0.36 23 6.82 80.65 31 5.65 Yes 65 1.8 Yes 24 0.82 Yes -26 0.54 No 44 69.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 88063814 - NM_001814 CTSC 1 0.49 2 52 6.11 86.1 16 5.87 Yes 52 0.58 No 0 0 No -28 0.82 Yes 42 94.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 88064793 - NM_001814 CTSC 1 0.02 0.1 7 -1.48 60.85 64 7.55 Yes 56 0.7 No 0 0 No -32 0.44 No 18 67.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 1780864 - NM_001909 CTSD 1 0.09 0.14 9 -2.66 0 9 3.87 No 15 1.96 Yes 0 0 No -27 0.92 Yes 43 91.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 79214565 - NM_001319137 CTSH 1 0.01 0.13 8 2.06 64.89 16 5.29 No 55 -4.49 No 19 0.84 Yes -38 0.33 No 49 28.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 79216327 - NM_001319137 CTSH 1 0.11 1.75 57 8.23 81.76 21 6.32 Yes 48 -1.91 No 0 0 No -21 0.59 No 50 54.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 79218597 - NM_001319137 CTSH 1 0.02 0.19 13 10.51 79.56 29 5.74 Yes 16 0.14 No 0 0 No -28 0.77 Yes 42 85.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 79219173 - NM_001319137 CTSH 1 0.03 0.43 22 6.46 78.75 22 5.16 No 9 0.3 No 0 0 No -21 0.41 No 43 55.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 79219211 - NM_001319137 CTSH 1 0.33 4.26 63 0.09 0 16 4.24 No 63 0.63 No 0 0 No -15 0.39 No 50 60.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 79219282 - NM_001319137 CTSH 1 0.02 0.22 12 3.44 73.22 28 5.53 No 6 0.61 No 23 0.76 Yes -27 0.54 No 43 46.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 79219779 - NM_001319137 CTSH 1 0.01 0.18 10 -2.39 58.74 39 7.93 Yes 26 0.78 Yes 0 0 No -38 0.91 Yes 32 91.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 79220415 - NM_001319137 CTSH 1 0.01 0.13 8 9.18 85.65 29 5.92 Yes 62 1.77 Yes 0 0 No -28 0.84 Yes 42 80.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 79228096 - NM_001319137 CTSH 1 0.03 0.47 22 -1.89 0 35 7.26 Yes 22 2.69 Yes 37 0.56 Yes -34 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 79229839 - NM_001319137 CTSH 1 0.94 0.1 7 11.1 86.45 15 5.66 Yes 2 0.68 No 29 0.41 Yes -20 0.42 No 41 44.63 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 79229839 - NM_001319137 CTSH 1 25.65 2.38 61 11.1 86.45 15 5.66 Yes 2 0.68 No 29 0.41 Yes -20 0.42 No 41 44.63 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 79231509 - NM_001319137 CTSH 1 0.08 0.67 29 -3.76 0 27 6.32 Yes 14 1.13 Yes 0 0 No -26 0.77 Yes 44 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 79231512 - NM_001319137 CTSH 1 0.02 0.17 9 -4.71 80.04 24 6.08 Yes 11 1.12 Yes 0 0 No -23 0.81 Yes 47 89.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 79235273 - NM_001319137 CTSH 1 0.02 0.13 9 7.51 91.03 23 5.38 No 51 -3.67 No 0 0 No -22 0.88 Yes 48 90.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 156848034 - NM_001334 CTSO 1 0.4 0.18 10 9.55 86.44 23 5.3 No 57 -4.87 No 0 0 No -22 0.9 Yes 48 91.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 150720762 - NM_001199739 CTSS 1 0.37 0.56 29 10.01 85.05 22 6.02 Yes 9 1.55 Yes 21 0.67 Yes -21 0.56 No 49 78.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 150722642 - NM_001199739 CTSS 1 0.05 0.14 7 -1.92 0 10 3.87 No 71 -3.73 No 0 0 No -31 0.91 Yes 39 88.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 150732486 - NM_001199739 CTSS 1 0.02 0.1 7 0.47 0 51 6.98 Yes 69 1.67 Yes 0 0 No -45 0.78 Yes 25 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150732490 - NM_001199739 CTSS 1 0.13 0.57 30 7.84 78.32 47 6.7 Yes 65 1.67 Yes 0 0 No -41 0.77 Yes 29 85.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150735578 - NM_001199739 CTSS 1 0.02 0.1 7 9.77 89.4 28 5.66 Yes 15 0.95 Yes 0 0 No -27 0.82 Yes 43 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 57571118 - NM_001336 CTSZ 1 0.07 0.26 17 7.86 87.64 26 5.8 Yes 13 0.28 No 0 0 No -21 0.71 Yes 49 49.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 57572045 - NM_001336 CTSZ 1 0.03 0.26 13 6.54 85.01 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.58 No 51 85.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 57572190 - NM_001336 CTSZ 1 0.03 0.18 13 3.67 84 15 4.05 No 2 1.5 Yes 0 0 No -58 0.71 Yes 12 66.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 57572208 - NM_001336 CTSZ 1 0.06 0.46 28 4.25 79.51 41 6.48 Yes 51 0.56 No 0 0 No -40 0.69 Yes 30 69.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 57572807 - NM_001336 CTSZ 1 0.02 0.14 9 -8.53 69.8 24 6.64 Yes 11 2.13 Yes 0 0 No -29 0.56 No 41 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 57573010 - NM_001336 CTSZ 1 0.1 0.61 31 7.14 81.98 33 7.38 Yes 16 1.27 Yes 0 0 No -32 0.89 Yes 38 91.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 57573746 - NM_001336 CTSZ 1 0.11 0.72 34 7.2 87.79 25 7.5 Yes 57 0.22 No 0 0 No -24 0.62 No 46 64.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 57574636 - NM_001336 CTSZ 1 0.07 0.4 21 9.59 88.86 28 7.81 Yes 52 -0.43 No 0 0 No -28 0.58 No 43 71.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 57581506 - NM_001336 CTSZ 1 0.09 0.25 15 4.63 77.64 19 4.61 No 6 0.73 No 26 0.32 Yes -18 0.93 Yes 52 94.27 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 70259970 + NM_001184740 CTTN 1 0.37 0.33 14 5.4 78.31 25 6.86 Yes 61 -2.55 No 0 0 No -24 0.51 No 33 53.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 70260651 + NM_001184740 CTTN 1 0.47 0.24 13 0.64 0 32 7.42 Yes 19 1.79 Yes 0 0 No -31 0.93 Yes 39 95.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 70267575 + NM_001184740 CTTN 1 10.7 4.31 67 7.98 83.33 58 10.86 Yes 45 2.34 Yes 22 0.67 Yes -57 0.75 Yes 13 91.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 112955881 + NM_018704 CTTNBP2NL 1 0.27 0.1 7 3.38 78.51 27 5.91 Yes 14 0.9 Yes 0 0 No -26 0.92 Yes 44 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 112967800 + NM_018704 CTTNBP2NL 1 0.27 0.13 9 9.3 90.3 30 5.51 No 10 1.4 Yes 0 0 No -29 0.63 No 41 71.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 88774548 + NM_001318507 CTU2 1 0.79 0.33 17 4.61 85.93 27 5.31 No 76 0.77 No 0 0 No -26 0.43 No 44 41.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 88776205 + NM_001318507 CTU2 1 0.39 0.14 8 6.01 78.66 20 5.83 Yes 49 1.04 Yes 0 0 No -19 0.64 No 51 45.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 88781041 + NM_001318507 CTU2 1 0.18 0.15 10 10.84 82.7 24 5.48 No 54 1.19 Yes 0 0 No -23 0.94 Yes 47 93.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88781249 + NM_001318507 CTU2 1 0.36 0.18 10 -2.65 0 15 4.51 No 31 -1.83 No 24 0.59 Yes -43 0.35 No 63 16.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 88781605 + NM_001318507 CTU2 1 0.62 0.46 23 2.68 81.97 19 5 No 45 -1.51 No 0 0 No -35 0.71 Yes 35 52.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104183639 - NM_024040 CUEDC2 1 0.32 0.71 38 4.41 66 50 7.52 Yes 44 1.1 Yes 24 0.76 Yes -39 0.47 No 31 57.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 104183858 - NM_024040 CUEDC2 1 0.15 0.14 9 2.94 72.97 19 6 Yes 68 -3.14 No 0 0 No -34 0.57 No 41 70.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 104184951 - NM_024040 CUEDC2 1 0.45 0.35 20 -14.74 0 27 6.56 Yes NA NA NA 0 0 No -26 0.43 No 44 62.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104184953 - NM_024040 CUEDC2 1 2.26 2.21 51 1.8 73.75 25 6.4 Yes NA NA NA 0 0 No -24 0.5 No 46 57.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104185042 - NM_024040 CUEDC2 1 0.19 0.17 10 1.23 83.95 20 3.51 No 8 -1.81 No 0 0 No -20 0.56 No 50 41.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104185045 - NM_024040 CUEDC2 1 0.15 0.14 10 0.27 0 17 3.27 No 75 -1.83 No 0 0 No -20 0.57 No 53 42.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104191219 - NM_024040 CUEDC2 1 2.31 2.08 60 11.21 96.32 29 5.01 No 47 1.33 Yes 0 0 No -23 0.47 No 47 79.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 148451091 + NM_003592 CUL1 1 0.1 0.17 10 2.21 61.88 23 4.83 No 25 1.22 Yes 0 0 No -27 0.48 No 48 61.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 148454059 + NM_003592 CUL1 1 0.14 0.22 14 -4.28 0 16 3.29 No 39 1.39 Yes 25 0.79 Yes -51 0.78 Yes 19 40.78 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 148457407 + NM_003592 CUL1 1 0.09 0.17 9 -1.47 63.27 13 4.97 No 37 0.18 No 25 0.7 Yes -54 0.26 No 58 46.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 148457520 + NM_003592 CUL1 1 0.17 0.29 18 3.8 78.2 37 5.46 No 12 0.39 No 0 0 No -36 0.37 No 33 43.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148463656 + NM_003592 CUL1 1 0.1 0.25 13 1.81 0 26 7.11 Yes 44 1.03 Yes 0 0 No -25 0.91 Yes 45 86.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148463656 + NM_003592 CUL1 1 0.07 0.17 10 1.81 0 26 7.11 Yes 44 1.03 Yes 0 0 No -25 0.91 Yes 45 86.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148485652 + NM_003592 CUL1 1 0.32 0.61 31 -3 0 33 5.48 No 67 1.16 Yes 0 0 No -29 0.59 No 41 46.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 148489803 + NM_003592 CUL1 1 0.07 0.13 9 3.56 0 26 7.14 Yes 13 0.59 No 39 0.41 Yes -26 0.41 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 35307689 - NM_001198777 CUL2 1 0.33 0.56 29 3.97 84.41 37 5.76 Yes 36 0.96 Yes 0 0 No -36 0.62 No 34 72.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 35320539 - NM_001198777 CUL2 1 0.1 0.21 13 -6.97 0 12 4.19 No 72 0.47 No 0 0 No -36 0.56 No 34 66.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 35320572 - NM_001198777 CUL2 1 0.07 0.14 9 -3.06 66.74 20 4.69 No 54 1.79 Yes 26 0.71 Yes -20 0.49 No 48 26.33 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 35338690 - NM_001198777 CUL2 1 0.27 0.36 18 -1.99 0 28 4.53 No 15 1.54 Yes 0 0 No -27 0.72 Yes 36 69.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 35349895 - NM_001198777 CUL2 1 0.09 0.15 10 -9.02 78.63 27 6.06 Yes 44 0.56 No 25 0.46 Yes -31 0.45 No 39 50.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 35351989 - NM_001198777 CUL2 1 0.24 0.42 23 -6.36 71.19 63 6.63 Yes 44 0.14 No 0 0 No -27 0.35 No 55 32.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 35359082 - NM_001198777 CUL2 1 0.19 0.33 17 -1.31 0 16 4.12 No 69 -1.15 No 0 0 No -41 0.46 No 29 50.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 225340052 - NM_003590 CUL3 1 0.04 0.13 8 6.27 90.1 24 3.63 No 51 1.51 Yes 0 0 No -23 0.52 No 47 49.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 225360690 - NM_003590 CUL3 1 0.05 0.17 10 -6.07 0 33 6.84 Yes 20 0.76 No 23 0.63 Yes -32 0.9 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 225378315 - NM_003590 CUL3 1 0.07 0.15 10 4.41 75.23 12 4.99 No 43 1.12 Yes 0 0 No -20 0.28 No 49 48.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 225378354 - NM_003590 CUL3 1 0.09 0.21 14 -5.54 84.46 23 4.1 No 4 1.15 Yes 0 0 No -30 0.43 No 40 37.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 225380808 - NM_003590 CUL3 1 0.09 0.25 10 7.01 84.72 25 5 No 53 -3.64 No 0 0 No -25 0.64 No 45 56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 225393832 - NM_003590 CUL3 1 0.33 0.93 41 7.12 82.38 28 6.6 Yes 15 0.5 No 0 0 No -27 0.66 No 43 67.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 225421107 - NM_003590 CUL3 1 0.11 0.29 15 6.03 83.18 27 4.09 No 62 1.31 Yes 22 0.72 Yes -22 0.8 Yes 48 69.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 225421138 - NM_003590 CUL3 1 1.18 3.08 68 4.45 88.81 16 4.98 No 31 1.32 Yes 20 0.53 Yes -26 0.64 No 44 54.71 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 225421156 - NM_003590 CUL3 1 0.05 0.11 8 -0.13 0 15 3.14 No 13 1.35 Yes 20 0.53 Yes -25 0.86 Yes 45 78.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 225421162 - NM_003590 CUL3 1 0.54 1.42 55 4.38 70.24 20 6.51 Yes 7 1.36 Yes 20 0.53 Yes -36 0.9 Yes 34 85.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 225431829 - NM_003590 CUL3 1 0.05 0.1 7 5.25 75.79 46 6.99 Yes 72 1.3 Yes 0 0 No -22 0.9 Yes 48 89.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 225449036 - NM_003590 CUL3 1 0.05 0.13 9 6.87 81.2 25 5.02 No 56 0.56 No 0 0 No -24 0.76 Yes 46 85.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113864597 + NM_001008895 CUL4A 1 0.12 0.17 8 5.86 99.55 29 6.87 Yes 16 -1.24 No 0 0 No -28 0.94 Yes 42 94.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113873243 + NM_001008895 CUL4A 1 0.49 0.64 32 -4.13 0 15 4.37 No 43 0.54 No 21 0.82 Yes -55 0.62 No 15 76.22 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr13 113873640 + NM_001008895 CUL4A 1 0.16 0.24 13 -5.16 0 23 4.31 No 68 0.26 No 22 0.88 Yes -6 0.57 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 113878772 + NM_001008895 CUL4A 1 0.16 0.22 14 -0.24 0 13 4.12 No 27 1.34 Yes 0 0 No -39 0.93 Yes 31 93.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 113879837 + NM_001008895 CUL4A 1 0.92 1.35 45 -8.5 0 41 6.34 Yes 49 -1.7 No 0 0 No -10 0.82 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 113882291 + NM_001008895 CUL4A 1 0.59 0.86 38 -4.34 0 16 4.36 No 14 0.04 No 0 0 No -15 0.83 Yes 55 74.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113882293 + NM_001008895 CUL4A 1 0.08 0.11 8 -26.48 0 18 4.58 No 16 0.04 No 0 0 No -17 0.79 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 113885522 + NM_001008895 CUL4A 1 0.16 0.19 11 -14.37 0 18 4.19 No 43 0.49 No 0 0 No -17 0.51 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 113883955 + NM_001008895 CUL4A 1 4.76 4.69 69 8.64 88.25 26 5.9 Yes 67 1.82 Yes 25 0.82 Yes -25 0.75 Yes 48 69.54 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 113885459 + NM_001008895 CUL4A 1 0.16 0.14 10 2.14 69.96 38 6.53 Yes 58 1.33 Yes 0 0 No -27 0.36 No 39 40.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 113893596 + NM_001008895 CUL4A 1 0.12 0.29 14 5.92 72.91 29 5.64 Yes 16 0.64 No 0 0 No -28 0.73 Yes 42 90.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113897921 + NM_001008895 CUL4A 1 0.08 0.13 9 6.42 86.18 23 5.71 Yes 10 0.6 No 0 0 No -23 0.46 No 44 70.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 113900278 + NM_001008895 CUL4A 1 0.11 0.18 11 0.6 0 12 4.24 No 22 0.47 No 0 0 No -34 0.63 No 30 75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 113906915 + NM_001008895 CUL4A 1 0.08 0.13 8 9.17 92.45 25 6.48 Yes 12 1.22 Yes 0 0 No -24 0.88 Yes 46 87.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 113908382 + NM_001008895 CUL4A 1 0.08 0.11 8 5.02 88.46 27 5.28 No 14 1.13 Yes 0 0 No -26 0.77 Yes 44 93.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 113913603 + NM_001008895 CUL4A 1 0.09 0.11 7 8.28 78.48 14 4.73 No 1 1.24 Yes 0 0 No -22 0.64 No 48 77.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 119662677 - NM_001079872 CUL4B 1 0.15 0.21 8 6.1 89.37 19 5.76 Yes 6 0.2 No 0 0 No -29 0.88 Yes 41 89.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 119678406 - NM_001079872 CUL4B 1 0.1 0.15 8 -6.77 76.78 26 6.29 Yes 13 0.77 Yes 0 0 No -25 0.69 Yes 45 75.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 119681044 - NM_001079872 CUL4B 1 0.18 0.15 10 4.16 72.25 30 5.74 Yes 73 0.64 No 0 0 No -29 0.95 Yes 41 96.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 119691416 - NM_001079872 CUL4B 1 0.23 0.18 12 8.69 80.82 22 5.03 No 40 1.02 Yes 0 0 No -21 0.75 Yes 49 63.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 119691435 - NM_001079872 CUL4B 1 0.71 0.51 27 4.53 75.93 13 5.55 No 21 1.04 Yes 0 0 No -31 0.44 No 37 68.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 119692148 - NM_001079872 CUL4B 1 0.12 0.15 9 5.31 82.09 27 5.22 No 7 0.28 No 0 0 No -26 0.79 Yes 44 83.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 107909330 + NM_003478 CUL5 1 0.14 0.15 7 1.86 81.38 19 4.2 No 65 -4.48 No 0 0 No -28 0.83 Yes 42 62.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 107925605 + NM_003478 CUL5 1 1.87 2.42 65 0.75 0 28 6.95 Yes 29 0.65 No 0 0 No -33 0.64 No 37 80.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 107926116 + NM_003478 CUL5 1 1 0.85 38 4.57 86.32 20 5.41 No 69 1.33 Yes 0 0 No -23 0.5 No 51 47.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 107931766 + NM_003478 CUL5 1 3.28 2.9 64 8.53 90.23 19 4.85 No 13 0.33 No 0 0 No -25 0.49 No 45 56.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 107944526 + NM_003478 CUL5 1 0.22 0.24 15 4.19 75.56 34 8.26 Yes 21 1.06 Yes 33 0.82 Yes -33 0.63 No 37 83.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 107949855 + NM_003478 CUL5 1 0.28 0.25 15 1.21 0 30 7.37 Yes 45 0.68 No 0 0 No -29 0.63 No 41 67.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 107953392 + NM_003478 CUL5 1 0.38 0.36 24 10.19 94.53 29 9.99 Yes 16 1.45 Yes 0 0 No -28 0.89 Yes 42 91.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 107954729 + NM_003478 CUL5 1 0.1 0.1 7 7.46 85.96 32 4.39 No 26 0.1 No 0 0 No -26 0.57 No 36 45.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 107969187 + NM_003478 CUL5 1 0.2 0.15 10 5.25 78.59 27 5.78 Yes 61 0.42 No 0 0 No -21 0.45 No 49 46.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 107976933 + NM_003478 CUL5 1 0.3 0.32 16 6.9 85.21 24 4.27 No 11 0.47 No 23 0.9 Yes -23 0.69 Yes 47 76.83 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 43006200 - NM_001168370 CUL7 1 3.46 0.79 43 -2.46 0 19 4.44 No 24 0.48 No 0 0 No -28 0.82 Yes 42 60.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 43006223 - NM_001168370 CUL7 1 11.09 2.6 66 -8.73 0 14 4 No 1 0.15 No 25 0.89 Yes -13 0.84 Yes 57 67.58 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 43010916 - NM_001168370 CUL7 1 1.28 0.29 16 0.82 70.66 23 7.48 Yes 70 -1.67 No 0 0 No -24 0.57 No 48 70.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 43015728 - NM_001168370 CUL7 1 25.69 3.82 68 9.99 90.79 22 6.13 Yes 41 0.43 No 27 0.67 Yes -28 0.41 No 42 40.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 43150729 + NM_015089 CUL9 1 11.56 0.49 27 5.75 78.62 37 5.88 Yes 55 1.38 Yes 0 0 No -23 0.79 Yes 47 67.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 43153228 + NM_015089 CUL9 1 11.04 2.61 65 -2.02 0 24 6.25 Yes 11 1.58 Yes 0 0 No -23 0.94 Yes 47 90.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43154709 + NM_015089 CUL9 1 0.97 0.18 12 2.1 0 20 4.58 No 42 1.15 Yes 0 0 No -19 0.92 Yes 51 52.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 43155646 + NM_015089 CUL9 1 1.25 0.51 24 5.33 82.31 24 5.73 Yes 36 0.65 No 0 0 No -23 0.81 Yes 47 83.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43165242 + NM_015089 CUL9 1 0.21 0.1 7 0.8 88.31 19 5.53 No 6 1.27 Yes 0 0 No -19 0.46 No 46 57.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43166427 + NM_015089 CUL9 1 2.93 1.14 44 3.27 74.66 32 6.77 Yes 19 1.28 Yes 0 0 No -31 0.61 No 39 75.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 43170457 + NM_015089 CUL9 1 1.5 0.49 25 5.81 0 29 6.48 Yes 16 1.59 Yes 0 0 No -28 0.94 Yes 42 93.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43171778 + NM_015089 CUL9 1 0.54 0.15 9 8.96 90.25 26 5.39 No 13 2.34 Yes 0 0 No -25 0.91 Yes 45 97.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43171833 + NM_015089 CUL9 1 2.84 0.85 35 7.28 85.04 41 6.84 Yes 68 2.34 Yes 0 0 No -40 0.86 Yes 30 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43172675 + NM_015089 CUL9 1 0.34 0.1 7 0.38 0 27 6.15 Yes 19 -0.25 No 0 0 No -31 0.84 Yes 44 79.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43172678 + NM_015089 CUL9 1 0.94 0.19 13 -1.56 0 11 4.12 No -2 -0.38 No 0 0 No -34 0.84 Yes 41 74.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43173844 + NM_015089 CUL9 1 2.31 0.63 31 6.92 77.17 15 6.35 Yes 63 -1.56 No 0 0 No -38 0.67 Yes 32 42.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 43181221 + NM_015089 CUL9 1 4.73 1.08 42 6.92 82.85 13 4.63 No 0 2.18 Yes 22 0.92 Yes -22 0.76 Yes 48 82.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 43181487 + NM_015089 CUL9 1 0.88 0.1 7 -3.17 0 23 4.57 No 72 0.91 Yes 0 0 No -22 0.91 Yes 48 70.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43181518 + NM_015089 CUL9 1 2.9 0.46 22 7.44 85.6 13 5.74 Yes 0 1.4 Yes 28 0.61 Yes -26 0.33 No 58 36.08 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 43182931 + NM_015089 CUL9 1 2 0.54 26 6.45 78.82 38 6.24 Yes NA NA NA 0 0 No -37 0.35 No 36 64.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43183900 + NM_015089 CUL9 1 5.01 1.06 34 -0.38 0 32 6.93 Yes 19 2 Yes 0 0 No -31 0.92 Yes 39 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43188174 + NM_015089 CUL9 1 0.56 0.11 8 5.52 76.33 46 6.9 Yes 33 0.02 No 27 0.81 Yes -33 0.48 No 25 71.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 43190030 + NM_015089 CUL9 1 1.06 0.39 22 -1.53 54.37 33 8.19 Yes 20 1.48 Yes 28 0.48 Yes -32 0.7 Yes 34 65.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 43190542 + NM_015089 CUL9 1 0.75 0.28 17 5.92 74.89 17 5.92 Yes 63 -3.28 No 0 0 No -28 0.54 No 50 54.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 101494315 + NM_015960 CUTC 1 0.31 0.1 7 2.5 75.77 23 4.99 No 0 0.27 No 0 0 No -28 0.33 No 41 37.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 101507043 + NM_015960 CUTC 1 0.18 0.15 9 2.3 71.13 25 4.42 No 40 0.37 No 0 0 No -24 0.75 Yes 46 71.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 101513352 + NM_015960 CUTC 1 0.34 0.15 10 7.83 81.08 21 5.66 Yes 62 1.23 Yes 0 0 No -20 0.7 Yes 50 76.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 101709562 + NM_181552 CUX1 1 0.52 0.25 15 10.09 91.88 38 8.17 Yes 25 1.21 Yes 0 0 No -20 0.61 No 33 71.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 101768807 + NM_181552 CUX1 1 1.04 0.68 29 5.08 90.76 26 5.29 No 13 0.85 Yes 25 0.86 Yes -25 0.83 Yes 45 86.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 101810092 + NM_181552 CUX1 1 0.65 0.24 15 9.38 83.22 30 6 Yes 33 0.79 Yes 0 0 No -29 0.75 Yes 41 75.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 101821754 + NM_181552 CUX1 1 18.57 7.24 71 -1.22 0 9 3.87 No 14 0.49 No 29 0.39 Yes -26 0.71 Yes 44 89.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 101840219 + NM_181552 CUX1 1 35 2.69 64 7.29 91.71 14 5.1 No 76 1.42 Yes 22 0.68 Yes -22 0.61 No 48 65.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 101844642 + NM_181552 CUX1 1 5.96 0.57 33 3.42 78.77 24 7.27 Yes 11 1.89 Yes 0 0 No -23 0.88 Yes 47 85.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94704437 - NM_016403 CWC15 1 0.06 0.25 16 10.26 92.19 22 6.78 Yes 9 1.68 Yes 0 0 No -21 0.91 Yes 49 89.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94704648 - NM_016403 CWC15 1 0.06 0.17 12 0.57 0 36 6.78 Yes 23 1.09 Yes 0 0 No -35 0.64 No 35 85.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94705350 - NM_016403 CWC15 1 0.1 0.28 15 -4.05 0 13 4.12 No 20 0.5 No 0 0 No -32 0.63 No 38 67.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94706154 - NM_016403 CWC15 1 0.1 0.24 14 6.34 77.99 37 6.94 Yes 71 -0.6 No 0 0 No -27 0.42 No 45 67.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 180817251 - NM_020943 CWC22 1 0.11 0.17 10 7.01 86.54 35 5.19 No 72 -5.04 No 0 0 No -34 0.41 No 43 66.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 180819758 - NM_020943 CWC22 1 0.16 0.22 16 -4.51 0 27 7.43 Yes 14 1.22 Yes 0 0 No -26 0.64 No 44 61.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 180835841 - NM_020943 CWC22 1 0.18 0.19 11 0.16 58.28 41 6.34 Yes 28 1.03 Yes 36 0.18 Yes -25 0.39 No 45 41.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 180846719 - NM_020943 CWC22 1 0.12 0.15 10 -3.07 0 16 3.8 No 71 1.44 Yes 0 0 No -57 0.49 No 27 61.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 36966654 - NR_073428 CWC25 1 1.35 0.83 36 9.81 85.83 34 4.74 No 21 1.38 Yes 29 0.89 Yes -21 0.72 Yes 49 83.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 36969114 - NR_073428 CWC25 1 0.23 0.13 7 -4.26 0 20 5.25 No 7 0.59 No 27 0.73 Yes -31 0.89 Yes 39 92.35 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 64077775 + NM_005869 CWC27 1 0.21 0.28 18 4.1 78.12 20 5.45 No 42 0.76 No 0 0 No -25 0.41 No 45 34.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 64084771 + NM_005869 CWC27 1 0.46 0.49 28 5.4 0 38 6.8 Yes 25 1.62 Yes 43 0.61 Yes -37 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 64103425 + NM_005869 CWC27 1 3.02 2.51 65 7.31 88.66 52 8.1 Yes 39 1.83 Yes 22 0.53 Yes -28 0.46 No 42 38.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 64117464 + NM_005869 CWC27 1 0.19 0.19 11 8.87 95.1 24 4.9 No 11 2.35 Yes 0 0 No -23 0.82 Yes 47 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 64138609 + NM_005869 CWC27 1 0.32 0.28 18 11.05 91.99 17 6.89 Yes 72 0.6 No 0 0 No -27 0.6 No 43 62.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 64140749 + NM_005869 CWC27 1 2.83 2.53 64 9 92.42 28 4.07 No 54 -1.47 No 0 0 No -26 0.91 Yes 44 92.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 64159346 + NM_005869 CWC27 1 0.24 0.22 12 9.07 91.65 144 12.22 Yes NA NA NA 0 0 No -33 0.55 No 25 71.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 64189777 + NM_005869 CWC27 1 3.04 2.19 60 11.13 87 40 6.07 Yes 35 0.53 No 0 0 No -29 0.56 No 41 74.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 64197692 + NM_005869 CWC27 1 0.53 0.36 21 9.05 81.17 24 6.72 Yes 29 0.57 No 0 0 No -30 0.65 No 40 76.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 64279702 + NM_005869 CWC27 1 0.14 0.14 7 5.72 90.92 26 5.29 No 67 0.54 No 0 0 No -23 0.64 No 45 74.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 64293929 + NM_005869 CWC27 1 0.18 0.21 10 12.77 97.02 27 4.43 No 68 1.41 Yes 0 0 No -26 0.74 Yes 44 87.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 64303475 + NM_005869 CWC27 1 0.61 0.61 31 4.74 84.41 32 8 Yes 37 2.06 Yes 0 0 No -31 0.96 Yes 39 95.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 102005888 - NM_001303405 CWF19L1 1 0.72 0.61 30 5.51 79.39 29 5.39 No 4 1.19 Yes 18 0.66 Yes -31 0.4 No 39 57.65 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 102009931 - NM_001303405 CWF19L1 1 0.13 0.15 9 3.37 0 27 7.34 Yes 14 0.69 No 0 0 No -26 0.56 No 44 57.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 102009936 - NM_001303405 CWF19L1 1 0.54 0.61 29 5.91 86.35 22 7.01 Yes 9 0.7 No 21 0.84 Yes -21 0.4 No 37 57.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 102010071 - NM_001303405 CWF19L1 1 1.89 2.22 65 6.01 89.01 15 5.28 No 46 0.09 No 0 0 No -58 0.43 No 49 35.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 102010678 - NM_001303405 CWF19L1 1 0.18 0.21 13 8.73 94.54 15 5.04 No 2 0.87 Yes 0 0 No -56 0.5 No 14 76.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 102012942 - NM_001303405 CWF19L1 1 2.43 2.78 66 10.89 99.45 18 4.9 No 69 0.99 Yes 0 0 No -20 0.73 Yes 50 81.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 102013253 - NM_001303405 CWF19L1 1 0.3 0.19 10 5.98 85.02 29 6.78 Yes 72 0.97 Yes 0 0 No -29 0.63 No 41 59.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 102020786 - NM_001303405 CWF19L1 1 11.5 11.54 72 7.14 78.25 24 5 No 32 0.51 No 28 0.88 Yes -23 0.91 Yes 47 94.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 107216217 - NM_152434 CWF19L2 1 2.4 0.9 43 8.68 86.65 27 5.6 Yes 14 0.56 No 26 0.79 Yes -26 0.76 Yes 44 63.03 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 107224402 - NM_152434 CWF19L2 1 0.74 0.46 27 4.55 74.66 22 6.9 Yes 70 0.6 No 0 0 No -21 0.63 No 49 50.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 107281007 - NM_152434 CWF19L2 1 0.73 0.5 27 5.41 86.44 19 4.78 No 70 0.64 No 0 0 No -18 0.45 No 45 65.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 107289011 - NM_152434 CWF19L2 1 3.13 1.9 54 4.47 76.44 78 6.27 Yes 10 1.13 Yes 0 0 No -33 0.78 Yes 37 83.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 107289011 - NM_152434 CWF19L2 1 0.25 0.13 8 4.47 76.44 78 6.27 Yes 10 1.13 Yes 0 0 No -33 0.78 Yes 37 83.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 107295778 - NM_152434 CWF19L2 1 0.35 0.21 10 11.13 99.17 32 5.89 Yes 72 -5.28 No 0 0 No -31 0.74 Yes 43 78.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 107313774 - NM_152434 CWF19L2 1 0.23 0.13 8 -4.24 68.58 34 6.74 Yes 1 1.19 Yes 20 0.78 Yes -21 0.79 Yes 37 70.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 107316303 - NM_152434 CWF19L2 1 0.4 0.31 14 9.67 91.39 28 5.13 No 46 1.14 Yes 0 0 No -27 0.67 Yes 43 57.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 107316328 - NM_152434 CWF19L2 1 0.68 0.46 23 9.37 89.4 34 6 Yes 21 1.14 Yes 0 0 No -33 0.58 No 37 71.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 118757896 + NM_001716 CXCR5 1 1.39 0.29 14 7.01 91.76 22 5.29 No 69 -3.66 No 0 0 No -21 0.65 No 49 71.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 30579058 - NM_025159 CXorf21 1 0.53 0.93 37 4.55 75.6 40 6.24 Yes 42 0.99 Yes 0 0 No -35 0.48 No 39 70.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 30589270 - NM_025159 CXorf21 1 0.46 0.79 34 6.94 93.6 22 5.76 Yes 9 1.03 Yes 0 0 No -27 0.52 No 49 54.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 30594979 - NM_025159 CXorf21 1 0.17 0.28 16 -1.66 0 31 6.54 Yes 8 0.8 Yes 0 0 No -36 0.64 No 34 88.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 19953713 - NM_198279 CXorf23 1 1.36 0.18 12 7.36 85.07 30 6.6 Yes 37 1.53 Yes 26 0.9 Yes -29 0.65 No 47 70.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 19954748 - NM_198279 CXorf23 1 0.67 0.1 7 0.92 79.64 34 5.13 No 38 0.93 Yes 0 0 No -26 0.93 Yes 44 92.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 19972329 - NM_198279 CXorf23 1 7.97 1.81 53 9.19 93.32 28 5.71 Yes 64 0.32 No 0 0 No -20 0.4 No 50 48.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 19983850 - NM_198279 CXorf23 1 0.62 0.14 9 5.75 73.58 30 8.12 Yes 72 1.15 Yes 28 0.63 Yes -36 0.62 No 34 83.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 19985685 - NM_198279 CXorf23 1 1.28 0.24 13 7.83 86.07 31 5.74 Yes 66 -1.69 No 0 0 No -20 0.59 No 50 85.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 148627239 + NM_001324280 CXorf40A 1 0.49 0.25 14 -2.9 55.4 30 6.48 Yes 17 0.28 No 0 0 No -29 0.89 Yes 41 81.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 148627313 + NM_001324280 CXorf40A 1 1.12 0.51 28 7.03 84.39 45 6.62 Yes 75 -1.98 No 23 0.7 Yes -26 0.63 No 47 55.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 149101956 - NM_001013845 CXorf40B 1 1.53 1.15 51 7.03 84.39 45 6.62 Yes 75 -1.97 No 0 0 No -26 0.62 No 47 55.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 149102030 - NM_001013845 CXorf40B 1 0.26 0.24 14 -2.9 55.4 30 6.48 Yes 17 0.28 No 0 0 No -29 0.89 Yes 41 81.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 149102792 - NM_001013845 CXorf40B 1 0.67 0.67 34 8.52 89.6 23 6.2 Yes 10 1.29 Yes 22 0.84 Yes -22 0.93 Yes 48 84.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 149105964 - NM_001013845 CXorf40B 1 0.22 0.11 8 -5.26 0 19 4.24 No 19 0.63 No 0 0 No -31 0.68 Yes 39 55.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 118678476 - NM_001170569 CXorf56 1 0.24 0.32 17 -1.66 0 15 4.22 No 40 0.12 No 23 0.45 Yes -40 0.5 No 18 76.09 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr18 47809080 - NM_014593 CXXC1 1 0.19 0.24 15 -1.05 0 15 4.58 No 43 -0.36 No 0 0 No -55 0.45 No 15 27.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 47809695 - NM_014593 CXXC1 1 1.42 1.61 54 6.15 79.33 47 4.17 No 5 -0.23 No 28 0.33 Yes -31 0.59 No 39 60.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 47810213 - NM_014593 CXXC1 1 0.13 0.19 13 7.48 88.04 16 5.66 Yes 44 -2.47 No 23 0.93 Yes -25 0.73 Yes 45 70.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 47810930 - NM_014593 CXXC1 1 0.15 0.21 13 -0.12 70 27 7.16 Yes 14 2 Yes 0 0 No -26 0.81 Yes 44 85.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 47811596 - NM_014593 CXXC1 1 0.14 0.15 10 2.68 0 18 4.58 No -2 0.85 Yes 0 0 No -17 0.86 Yes 53 76.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 47812626 - NM_014593 CXXC1 1 0.06 0.11 7 -8.72 70.84 30 5.59 Yes 21 1.86 Yes 0 0 No -33 0.78 Yes 37 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 47813879 - NM_014593 CXXC1 1 2.51 2.14 62 2.83 73.3 27 5.57 Yes 63 -4.56 No 27 0.68 Yes -27 0.75 Yes 43 57.19 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 105396413 - NM_025212 CXXC4 1 1.51 0.24 14 7.13 80.61 50 7.71 Yes -1 1.16 Yes 0 0 No -40 0.67 Yes 30 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 139062450 + NM_001317208 CXXC5 1 0.92 1.47 51 2.68 67.34 44 7.71 Yes 31 2.22 Yes 0 0 No -43 0.61 No 27 76.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 61510777 - NM_001915 CYB561 1 0.6 0.1 7 10.43 88.44 22 6.32 Yes 9 0.44 No 21 0.79 Yes -21 0.95 Yes 49 91.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 61511982 - NM_001915 CYB561 1 1.24 0.22 14 3.94 69.8 20 6.4 Yes 1 0.55 No 19 0.86 Yes -19 0.83 Yes 51 83.34 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61120904 - NM_001300763 CYB561A3 1 0.06 0.18 11 7.45 89.38 27 5.66 Yes 73 1.47 Yes 0 0 No -26 0.71 Yes 44 70.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61121035 - NM_001300763 CYB561A3 1 0.3 0.79 39 9.33 85.86 45 6.77 Yes 37 1.83 Yes 44 0.84 Yes -44 0.93 Yes 26 97.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61121296 - NM_001300763 CYB561A3 1 0.12 0.14 9 7.99 83.67 20 6 Yes 62 0.61 No 26 0.59 Yes -20 0.51 No 51 58.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 61123561 - NM_001300763 CYB561A3 1 0.1 0.18 11 11.03 87.79 37 6.08 Yes 24 0.6 No 30 0.8 Yes -30 0.91 Yes 40 92.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61124198 - NM_001300763 CYB561A3 1 0.27 0.25 12 -17.46 74.48 21 6 Yes 8 1.34 Yes 0 0 No -20 0.73 Yes 50 72.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61124844 - NM_001300763 CYB561A3 1 1.3 1.07 46 8.25 81.34 40 6.77 Yes 27 0.59 No 28 0.58 Yes -28 0.73 Yes 31 50.27 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 61125252 - NM_001300763 CYB561A3 1 0.29 0.35 19 4.41 86.95 19 4.9 No 58 0.59 No 0 0 No -18 0.79 Yes 52 86.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61127044 - NM_001300763 CYB561A3 1 0.74 0.94 41 1 0 19 4.58 No 6 0.55 No 29 0.76 Yes -18 0.58 No 52 56.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 61128815 - NM_001300763 CYB561A3 1 0.33 0.38 19 8.04 88.24 26 5.94 Yes 13 1.41 Yes 0 0 No -25 0.55 No 45 65.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 50388773 + NR_111912 CYB561D2 1 42.76 18.1 72 7.45 86.9 13 5.31 No 19 -0.83 No 26 0.61 Yes -31 0.85 Yes 39 93.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 71958236 - NM_001914 CYB5A 1 0.07 0.13 7 1.84 76.31 13 4.8 No 13 1.46 Yes 0 0 No -29 0.53 No 41 76.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 71958250 - NM_001914 CYB5A 1 0.07 0.14 10 5.49 86.05 16 4.6 No -1 1.49 Yes 0 0 No -15 0.39 No 55 54.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69464146 + NM_030579 CYB5B 1 0.03 0.17 10 1.23 0 32 6.77 Yes 19 0.85 Yes 0 0 No -32 0.48 No 36 58.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69475474 + NM_030579 CYB5B 1 0.05 0.26 13 5.56 78.17 33 6.27 Yes 20 0.23 No 0 0 No -32 0.9 Yes 38 91.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 69490067 + NM_030579 CYB5B 1 0.02 0.13 7 1.78 0 59 6.56 Yes 46 0.77 No 0 0 No -29 0.33 No 41 40.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 69496364 + NM_030579 CYB5B 1 0.05 0.26 14 4.51 82.83 41 5 No 52 1.08 Yes 23 0.38 Yes -56 0.25 No 45 48.37 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 69496379 + NM_030579 CYB5B 1 0.05 0.29 18 6.14 82.34 20 4.86 No 67 1.09 Yes 0 0 No -22 0.74 Yes 48 79.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7762767 + NM_144607 CYB5D1 1 13.04 1.31 45 3.26 73.48 17 5.3 No 0 0.05 No 28 0.47 Yes -34 0.74 Yes 36 79.56 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4054237 + NM_144611 CYB5D2 1 0.91 0.19 12 11.41 86.81 13 5.66 Yes 56 0.73 No 25 0.78 Yes -25 0.55 No 45 79.2 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 202933678 - NM_016243 CYB5R1 1 0.27 0.13 7 3.26 68.08 50 7.24 Yes 37 0.88 Yes 0 0 No -23 0.89 Yes 47 85.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 202935141 - NM_016243 CYB5R1 1 0.53 0.24 14 1.74 68.51 20 4.88 No 43 0.55 No 25 0.93 Yes -19 0.91 Yes 51 72.74 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 202935238 - NM_016243 CYB5R1 1 0.55 0.29 16 7.71 77.02 36 5.84 Yes 62 0.27 No 28 0.94 Yes -28 0.89 Yes 42 86.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 7687171 - NM_001302826 CYB5R2 1 1.73 0.35 18 9.45 89.67 35 7.35 Yes 22 0.56 No 34 0.69 Yes -34 0.94 Yes 36 97.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 7687778 - NM_001302826 CYB5R2 1 2.64 0.25 12 1.83 0 24 5.48 No 11 0.11 No 0 0 No -23 0.91 Yes 47 92.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 43023910 - NM_000398 CYB5R3 1 0.03 0.13 8 6.21 86.74 29 5.38 No 20 1.66 Yes 0 0 No -24 0.64 No 48 64.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 43032605 - NM_000398 CYB5R3 1 0.24 0.56 31 8.77 83.02 32 5.83 Yes 19 0.6 No 0 0 No -31 0.57 No 39 59.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 84621299 + NM_016230 CYB5R4 1 0.35 0.49 28 6.53 87 26 5.08 No 7 1.18 Yes 0 0 No -25 0.85 Yes 45 86.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 84635854 + NM_016230 CYB5R4 1 1.69 2.43 57 8.83 88.45 58 7.48 Yes 15 1.66 Yes 0 0 No -27 0.81 Yes 43 91.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 84649858 + NM_016230 CYB5R4 1 1.35 1.51 47 5.69 90.28 24 5.2 No 34 -3.1 No 0 0 No -21 0.7 Yes 49 66.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 54640292 - NM_001031672 CYB5RL 1 1.38 0.24 16 9.52 82.2 28 4.58 No 15 1.29 Yes 0 0 No -27 0.79 Yes 43 92.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 54645907 - NM_001031672 CYB5RL 1 3.16 0.54 25 12.12 88.27 23 8.06 Yes 10 1.93 Yes 22 0.89 Yes -22 0.97 Yes 48 96.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 54649648 - NM_001031672 CYB5RL 1 2.67 0.38 20 6.88 81.27 31 6.3 Yes 18 0.49 No 0 0 No -30 0.72 Yes 40 83.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 54661308 - NM_001031672 CYB5RL 1 3.03 0.76 37 6.97 88.84 16 4.69 No 34 -1.1 No 20 0.22 Yes -19 0.46 No 51 53.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 88709990 - NM_000101 CYBA 1 0.2 2.26 65 3.34 77.52 11 6.37 Yes -2 0.13 No 34 0.09 Yes -34 0.25 No 50 26.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 88710683 - NM_000101 CYBA 1 0.03 0.29 15 8.08 93.5 16 4.69 No 34 1.65 Yes 0 0 No -46 0.72 Yes 47 75.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88710704 - NM_000101 CYBA 1 0.02 0.31 15 8.1 90.84 26 10.24 Yes 13 1.37 Yes 0 0 No -25 0.95 Yes 45 96.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88711230 - NM_000101 CYBA 1 0.01 0.13 9 4.6 83.95 65 8.53 Yes 52 0.39 No 0 0 No -43 0.67 Yes 27 79.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88711838 - NM_000101 CYBA 1 0.03 0.35 19 8.97 81.57 23 5.1 No 21 0.92 Yes 22 0.89 Yes -22 0.92 Yes 48 92.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88713012 - NM_000101 CYBA 1 0.05 0.74 35 6.7 83.84 48 6.98 Yes 35 0.94 Yes 31 0.32 Yes -47 0.4 No 23 75.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 88713196 - NM_000101 CYBA 1 0.05 0.63 32 7.25 78.8 24 5.39 No 23 -0.36 No 0 0 No -23 0.64 No 47 60.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 88713590 - NM_000101 CYBA 1 0.34 1.96 62 -3.51 0 27 5.63 Yes 14 0.79 Yes 32 0.86 Yes -26 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 88713620 - NM_000101 CYBA 1 0.02 0.11 8 6.81 84.62 26 5.2 No 17 -2.21 No 32 0.86 Yes -26 0.64 No 44 66.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 88716101 - NM_000101 CYBA 1 0.03 0.17 11 11.02 82.66 29 5.92 Yes NA NA NA 0 0 No -28 0.78 Yes 42 92.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88716292 - NM_000101 CYBA 1 0.04 0.28 11 11.34 87.12 28 6.3 Yes 15 1.87 Yes 0 0 No -27 0.93 Yes 43 92.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88717149 - NM_000101 CYBA 1 0.04 0.26 17 6.44 89.88 13 4.8 No 0 1.06 Yes 0 0 No -24 0.89 Yes 46 68.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 37642746 + NM_000397 CYBB 1 0.04 0.11 8 0.45 0 33 6.25 Yes 20 0.9 Yes 0 0 No -32 0.88 Yes 38 92.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 37649220 + NM_000397 CYBB 1 0.13 0.22 16 6.82 86.04 28 6.46 Yes 15 1.22 Yes 0 0 No -27 0.96 Yes 43 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172407487 + NM_001256909 CYBRD1 1 2.87 2.18 59 11.07 86.37 43 6.99 Yes 30 2.19 Yes 42 0.5 Yes -42 0.69 Yes 28 64.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 172407491 + NM_001256909 CYBRD1 1 0.2 0.11 7 4.96 0 47 7.27 Yes 34 2.18 Yes 0 0 No -46 0.71 Yes 24 68.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 145150713 + NM_001916 CYC1 1 0.34 0.68 33 5.56 84.51 28 5.48 No 23 -2.74 No 18 0.44 Yes -23 0.59 No 43 50.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 145150739 + NM_001916 CYC1 1 0.1 0.15 9 -6.05 0 21 4.69 No 8 0.11 No 0 0 No -20 0.88 Yes 50 74.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145151465 + NM_001916 CYC1 1 0.03 0.17 10 -0.03 67.56 20 5.74 Yes 7 1.59 Yes 23 0.94 Yes -19 0.79 Yes 51 64.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 25163760 - NM_018947 CYCS 1 0.01 0.15 8 -4.56 0 13 3.83 No 38 0.28 No 21 0.92 Yes -46 0.35 No 20 34.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 25164435 - NM_018947 CYCS 1 0.01 0.11 8 4.69 75.24 24 5.29 No 31 0.9 Yes 24 0.73 Yes -24 0.41 No 49 32.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 22956038 + NM_001324119 CYFIP1 1 4.13 2.32 63 9.71 73.18 43 7.31 Yes 30 2.57 Yes 42 0.87 Yes -42 0.81 Yes 28 97.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 22964565 + NM_001324119 CYFIP1 1 0.14 0.13 9 4.38 81.68 15 4.58 No 33 -1.7 No 0 0 No -23 0.18 No 25 21.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 22991047 + NM_001324119 CYFIP1 1 0.23 0.18 9 5.06 88.3 21 4.79 No 74 1.11 Yes 0 0 No -20 0.73 Yes 50 83.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156712353 + NM_014376 CYFIP2 1 2.83 0.19 14 6.05 0 28 7.45 Yes 15 2.6 Yes 25 0.77 Yes -27 0.88 Yes 43 91.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 156715620 + NM_014376 CYFIP2 1 1.54 4.26 69 7.42 93.57 30 6.05 Yes 17 0.8 Yes 29 0.91 Yes -29 0.87 Yes 41 91.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 156720246 + NM_014376 CYFIP2 1 0.04 0.11 7 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -25 0.34 No 43 63.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 156723680 + NM_014376 CYFIP2 1 0.49 1.83 55 9.58 90.31 36 6.16 Yes 23 0.47 No 26 0.39 Yes -35 0.73 Yes 35 68.8 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 156735532 + NM_014376 CYFIP2 1 0.04 0.15 9 8.09 80.59 18 6.75 Yes 5 1.19 Yes 0 0 No -31 0.91 Yes 39 97.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156736753 + NM_014376 CYFIP2 1 1.2 3.83 70 4.64 84.69 30 5.74 Yes 17 1.03 Yes 0 0 No -29 0.96 Yes 41 94.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156737101 + NM_014376 CYFIP2 1 0.24 0.65 30 5.4 79.6 19 5.39 No 6 1.15 Yes 0 0 No -18 0.77 Yes 52 80 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156737104 + NM_014376 CYFIP2 1 0.33 0.83 36 7.26 89.73 22 5.66 Yes 9 1.14 Yes 0 0 No -21 0.85 Yes 49 83.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156741887 + NM_014376 CYFIP2 1 0.56 1.17 46 9.86 91.21 28 4.98 No 15 0.28 No 0 0 No -23 0.7 Yes 47 69.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 156749949 + NM_014376 CYFIP2 1 0.13 0.5 21 9.17 79.9 104 10.53 Yes NA NA NA 24 0.32 Yes -34 0.43 No 36 77.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 156751778 + NM_014376 CYFIP2 1 0.12 0.54 28 3.87 84.41 30 7.26 Yes 33 0.99 Yes 29 0.61 Yes -25 0.36 No 45 68.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 156752492 + NM_014376 CYFIP2 1 0.2 0.78 36 1.37 71.24 33 5.83 Yes 20 1.06 Yes 0 0 No -32 0.88 Yes 38 93.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156761045 + NM_014376 CYFIP2 1 0.07 0.26 16 8.01 85.75 18 5.3 No 37 1.61 Yes 0 0 No -23 0.47 No 47 56.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 156787562 + NM_014376 CYFIP2 1 0.14 0.64 33 4.66 80.56 23 5.26 No 10 0.77 No 0 0 No -22 0.84 Yes 48 87.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 156787567 + NM_014376 CYFIP2 1 0.09 0.44 22 3.41 0 28 5.69 Yes 15 0.74 No 0 0 No -27 0.81 Yes 43 87.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 156817401 + NM_014376 CYFIP2 1 0.06 0.13 7 9.21 82.25 28 5.66 Yes 15 1.46 Yes 0 0 No -27 0.94 Yes 43 96.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156817532 + NM_014376 CYFIP2 1 0.18 0.36 22 2.33 0 35 6 Yes 22 1.43 Yes 0 0 No -34 0.79 Yes 36 74.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 156818790 + NM_014376 CYFIP2 1 0.11 0.33 16 -0.61 75.81 34 10.63 Yes 21 0.91 Yes 0 0 No -26 0.67 Yes 37 40.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 145678792 - NM_001330618 CYHR1 1 0.69 0.33 18 6.09 76.48 46 5.1 No 68 0.94 Yes 0 0 No -34 0.46 No 25 69.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145678795 - NM_001330618 CYHR1 1 0.84 0.43 19 4.05 70.79 43 4.97 No 65 0.94 Yes 0 0 No -31 0.48 No 28 64.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 50778640 + NM_001042412 CYLD 1 55.64 58.44 72 9.42 86.73 32 6.77 Yes 19 1.62 Yes 25 0.75 Yes -25 0.87 Yes 45 86.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50778672 + NM_001042412 CYLD 1 0.2 0.21 12 -0.22 0 24 5.38 No 51 1.61 Yes 0 0 No -23 0.67 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 50778778 + NM_001042412 CYLD 1 0.14 0.15 10 0.13 64.55 90 11.46 Yes 6 1.08 Yes 0 0 No -22 0.45 No 12 40.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 50783459 + NM_001042412 CYLD 1 1.51 1.5 49 8.49 86.46 26 5.55 No 13 1.05 Yes 25 0.83 Yes -25 0.85 Yes 45 86.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50783512 + NM_001042412 CYLD 1 0.2 0.18 10 -6.34 0 31 5.92 Yes 66 1.04 Yes 0 0 No -58 0.56 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 50783559 + NM_001042412 CYLD 1 12.56 13 72 1.18 68.44 30 9.05 Yes 17 1.07 Yes 0 0 No -29 0.83 Yes 41 70.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 50783566 + NM_001042412 CYLD 1 0.27 0.29 18 -7.38 0 14 3.94 No 24 1.06 Yes 0 0 No -36 0.79 Yes 34 69.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 50785518 + NM_001042412 CYLD 1 1.14 3.79 67 -8.21 0 68 8.82 Yes 55 0.78 Yes 0 0 No -37 0.72 Yes 33 79.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 50788371 + NM_001042412 CYLD 1 0.53 2.07 60 -13.9 0 44 6.71 Yes 36 0.03 No 0 0 No -43 0.74 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 50801016 + NM_001042412 CYLD 1 0.02 0.1 7 10.8 88.94 19 4.78 No 6 0.06 No 0 0 No -23 0.63 No 52 64.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 50810091 + NM_001042412 CYLD 1 0.03 0.13 8 -6.96 76.38 45 6.78 Yes 59 0.62 No 24 0.91 Yes -25 0.51 No 39 68.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 50813561 + NM_001042412 CYLD 1 0.04 0.14 9 6.05 77.95 20 5.35 No 7 0.02 No 19 0.77 Yes -26 0.66 No 44 77.98 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 50813581 + NM_001042412 CYLD 1 0.41 1.33 46 0.41 0 16 3.87 No 3 0.52 No 0 0 No -26 0.82 Yes 44 86.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50813605 + NM_001042412 CYLD 1 5.71 18.32 72 6.73 78.75 14 5.48 No 27 0.51 No 0 0 No -26 0.33 No 44 48.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 50813646 + NM_001042412 CYLD 1 0.11 0.36 20 2.89 73.92 24 6.16 Yes 11 1.7 Yes 0 0 No -23 0.85 Yes 47 67.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 50815142 + NM_001042412 CYLD 1 0.22 0.57 27 0.86 62.34 14 4.83 No 73 -1.78 No 23 0.57 Yes -26 0.55 No 21 40.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 50819459 + NM_001042412 CYLD 1 0.09 0.4 23 4.01 79.43 25 7.73 Yes 57 0.55 No 0 0 No -24 0.58 No 46 67.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 50820749 + NM_001042412 CYLD 1 0.35 1.53 60 2.05 64.33 48 6.24 Yes 65 -4.93 No 20 0.85 Yes -24 0.46 No 46 47.17 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 50821550 + NM_001042412 CYLD 1 0.07 0.17 11 8.58 95.72 37 6.53 Yes 16 0.82 Yes 0 0 No -32 0.66 No 38 72.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 50825473 + NM_001042412 CYLD 1 0.04 0.1 7 -0.04 0 47 5.6 Yes 76 -2.87 No 0 0 No -43 0.36 No 28 63.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 50830213 + NM_001042412 CYLD 1 0.07 0.15 8 0.78 69.54 15 5.34 No 2 0.84 Yes 25 0.74 Yes -22 0.5 No 56 28.35 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 50834730 + NM_001042412 CYLD 1 0.06 0.11 7 8.42 84.55 17 5.84 Yes 4 0.85 Yes 26 0.54 Yes -22 0.62 No 48 71.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 38298468 - NM_000104 CYP1B1 1 0.19 0.13 9 2.35 0 23 6.31 Yes 10 1.67 Yes 36 0.88 Yes -22 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 38301003 - NM_000104 CYP1B1 1 0.72 0.38 21 1.88 72.48 20 4.9 No 7 0.75 No 0 0 No -19 0.86 Yes 51 65.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 204108291 + NM_177538 CYP20A1 1 0.77 0.36 22 5.24 80.12 20 7.07 Yes 7 0.76 No 0 0 No -32 0.63 No 40 57.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 204110576 + NM_177538 CYP20A1 1 0.6 0.25 15 -0.42 0 11 4.12 No 26 0.6 No 0 0 No -34 0.69 Yes 36 80.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 204111579 + NM_177538 CYP20A1 1 1.07 0.4 20 7.35 89.36 38 6.48 Yes 65 -3.33 No 0 0 No -31 0.7 Yes 39 70.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 204127456 + NM_177538 CYP20A1 1 0.34 0.28 13 4.3 91.85 25 3.79 No 0 0.99 Yes 0 0 No -24 0.71 Yes 46 54.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 204137368 + NM_177538 CYP20A1 1 0.35 0.18 9 -4.45 0 17 3.01 No 45 0.17 No 24 0.23 Yes -43 0.65 No 27 91.25 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 204142283 + NM_177538 CYP20A1 1 0.15 0.13 8 7.76 89.84 31 5.45 No 67 0.72 No 0 0 No -22 0.49 No 48 54.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 204142283 + NM_177538 CYP20A1 1 0.26 0.21 14 7.76 89.84 31 5.45 No 67 0.72 No 0 0 No -22 0.49 No 48 54.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 14900754 - NM_024514 CYP2R1 1 2.28 0.25 12 -0.93 62.2 37 6.73 Yes 24 0.27 No 23 0.75 Yes -36 0.57 No 34 55.48 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 187113405 + NM_207352 CYP4V2 1 4.31 0.51 27 5.99 82.93 21 5.18 No 8 0.32 No 0 0 No -20 0.63 No 50 71.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 187113508 + NM_207352 CYP4V2 1 1.64 0.19 12 0.97 64.9 38 6.48 Yes 42 1.55 Yes 0 0 No -37 0.89 Yes 33 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 187130249 + NM_207352 CYP4V2 1 4.8 1.19 45 3.54 86.9 52 5.86 Yes 39 1.77 Yes 0 0 No -29 0.9 Yes 41 90.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 187130304 + NM_207352 CYP4V2 1 0.84 0.21 14 4.54 77.2 32 6.07 Yes 19 1.16 Yes 0 0 No -31 0.65 No 47 56.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 187131485 + NM_207352 CYP4V2 1 2.16 0.46 22 8.39 92.12 22 5.2 No 57 1.49 Yes 0 0 No -21 0.91 Yes 49 92.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 91755306 - NM_001146152 CYP51A1 1 0.04 0.15 10 3.66 83.86 29 6.38 Yes 16 1.53 Yes 0 0 No -28 0.92 Yes 42 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 91755741 - NM_001146152 CYP51A1 1 0.08 0.29 13 -9.3 0 30 4.23 No 8 1.15 Yes 0 0 No -30 0.36 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 65524392 - NM_001324112 CYP7B1 1 0.87 1.01 41 6.24 88.86 21 4.24 No 8 0.7 No 0 0 No -20 0.79 Yes 50 92.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 65527778 - NM_001324112 CYP7B1 1 0.14 0.14 8 1.47 0 15 4.58 No 28 1.3 Yes 0 0 No -40 0.65 No 30 77.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 65534666 - NM_001324112 CYP7B1 1 0.17 0.13 9 3.9 81.21 45 6.79 Yes 32 0.83 Yes 0 0 No -31 0.55 No 39 58.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 10205934 - NM_001037160 CYS1 1 1.27 0.36 19 11.7 90.7 31 5.9 Yes 18 0.74 No 0 0 No -30 0.8 Yes 40 88.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 139568648 + NM_032412 CYSTM1 1 0.16 0.24 13 8.42 90.51 31 5.43 No 49 0.99 Yes 0 0 No -30 0.95 Yes 40 96.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 139608314 + NM_032412 CYSTM1 1 1.29 3.11 60 6.17 76.57 46 7.94 Yes 33 2.14 Yes 0 0 No -45 0.94 Yes 25 96.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76672247 - NM_017456 CYTH1 1 0.1 0.35 19 0.79 0 39 6.96 Yes 26 2.17 Yes 0 0 No -38 0.96 Yes 32 97.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76673133 - NM_017456 CYTH1 1 10.27 37.21 72 8.86 79.93 27 6.63 Yes 14 0.7 No 26 0.91 Yes -26 0.96 Yes 44 96.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 76676426 - NM_017456 CYTH1 1 0.03 0.21 13 -12 0 48 7.21 Yes 35 1.36 Yes 0 0 No -30 0.47 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76676435 - NM_017456 CYTH1 1 0.03 0.22 13 3.85 0 39 6.55 Yes 26 1.29 Yes 29 0.75 Yes -21 0.37 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 76681279 - NM_017456 CYTH1 1 0.03 0.14 9 3.01 0 34 6.16 Yes 21 0.86 Yes 0 0 No -32 0.29 No 39 42.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76684931 - NM_017456 CYTH1 1 0.13 0.67 34 7 87.91 24 4.8 No 11 0.02 No 0 0 No -23 0.89 Yes 47 81.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76696522 - NM_017456 CYTH1 1 0.06 0.28 17 0.3 0 37 5.97 Yes 37 0.11 No 0 0 No -28 0.68 Yes 42 70.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76700993 - NM_017456 CYTH1 1 0.03 0.1 7 1.87 0 38 6.28 Yes 48 1.39 Yes 0 0 No -37 0.73 Yes 33 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76700997 - NM_017456 CYTH1 1 0.06 0.26 14 5.45 84.21 34 6.12 Yes 44 1.39 Yes 0 0 No -33 0.75 Yes 37 68.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 76704342 - NM_017456 CYTH1 1 0.23 0.82 44 -4.61 84.28 26 8.16 Yes 13 1.69 Yes 0 0 No -25 0.85 Yes 45 87.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76723911 - NM_017456 CYTH1 1 0.59 0.85 36 10.88 87.67 29 5.74 Yes 41 1.66 Yes 0 0 No -28 0.67 Yes 42 73.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76725653 - NM_017456 CYTH1 1 0.19 0.28 16 6.14 77.61 31 5.78 Yes 54 -3.63 No 0 0 No -30 0.59 No 40 56.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76738001 - NM_017456 CYTH1 1 0.79 1.18 44 6.91 87.14 28 7.04 Yes 60 0.15 No 0 0 No -27 0.94 Yes 43 95.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76758221 - NM_017456 CYTH1 1 0.2 0.31 17 7.94 92.64 24 4.68 No 5 0.18 No 0 0 No -23 0.71 Yes 47 66.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 48976978 + NM_017457 CYTH2 1 0.35 0.35 21 0.7 81.75 11 4.69 No 54 -2.65 No 24 0.93 Yes -24 0.86 Yes 46 36.41 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 37678904 + NM_013385 CYTH4 1 0.79 0.13 9 3.2 74.47 26 5.65 Yes 7 0.27 No 0 0 No -25 0.77 Yes 45 73.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 37696110 + NM_013385 CYTH4 1 1.13 0.21 15 2.3 82.35 19 3.75 No 52 0.7 No 21 0.7 Yes -19 0.56 No 52 61.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 37700212 + NM_013385 CYTH4 1 7.32 1.26 47 3.23 71.92 23 4.74 No 76 0.32 No 22 0.76 Yes -22 0.79 Yes 48 52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 158272578 - NM_004288 CYTIP 1 0.02 0.1 7 4.04 77.23 34 8.06 Yes 63 -1.66 No 0 0 No -32 0.58 No 38 68.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 158272670 - NM_004288 CYTIP 1 0.04 0.22 14 0.68 73.65 25 4.84 No 72 1.2 Yes 21 0.91 Yes -24 0.67 Yes 46 53.41 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 158288056 - NM_004288 CYTIP 1 0.1 0.53 27 7.77 83.2 24 3.69 No 4 1.09 Yes 0 0 No -23 0.51 No 53 50.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 158290936 - NM_004288 CYTIP 1 0.06 0.36 21 -14.47 0 35 6.02 Yes 72 0.93 Yes 0 0 No -34 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 158290964 - NM_004288 CYTIP 1 0.06 0.33 15 5.73 84.94 21 6.55 Yes 44 0.93 Yes 33 0.7 Yes -27 0.4 No 50 32.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242683053 + NM_001287249 D2HGDH 1 14.34 4.61 70 1.56 89.36 21 5.1 No 63 -1.28 No 20 0.6 Yes -28 0.71 Yes 51 63.68 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 242683586 + NM_001287249 D2HGDH 1 0.69 0.31 18 9.39 91.24 28 6.56 Yes 15 1.75 Yes 0 0 No -27 0.89 Yes 43 93.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242684751 + NM_001287249 D2HGDH 1 23.96 4.5 68 13.09 90.83 32 5.92 Yes 57 0.73 No 0 0 No -31 0.83 Yes 39 83.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242688241 + NM_001287249 D2HGDH 1 1.95 0.38 19 6.68 92.54 30 6.48 Yes 54 1.41 Yes 23 0.58 Yes -29 0.65 No 47 68.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242688279 + NM_001287249 D2HGDH 1 19.97 3.64 64 5.33 76.45 45 6.72 Yes 6 1.52 Yes 18 0.56 Yes -44 0.91 Yes 26 95.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 242689961 + NM_001287249 D2HGDH 1 0.51 0.17 9 8.9 91.9 26 5.15 No -1 0.44 No 0 0 No -25 0.78 Yes 45 94.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242694459 + NM_001287249 D2HGDH 1 1.89 0.4 22 7.88 81.26 37 6.24 Yes -3 0.33 No 29 0.48 Yes -32 0.4 No 34 62.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242694045 + NM_001287249 D2HGDH 1 7.83 1.72 49 3.75 0 38 6.16 Yes 25 0.64 No 33 0.12 Yes -33 0.26 No 37 51.99 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242694459 + NM_001287249 D2HGDH 1 1.53 0.28 16 7.88 81.26 37 6.24 Yes -3 0.33 No 29 0.48 Yes -32 0.4 No 34 62.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242697026 + NM_001287249 D2HGDH 1 1.1 0.36 22 8.4 85.73 24 5 No 11 1.2 Yes 0 0 No -23 0.81 Yes 47 82.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242698487 + NM_001287249 D2HGDH 1 5.45 1.61 52 5.68 81.86 28 6.53 Yes 15 0.72 No 0 0 No -27 0.7 Yes 43 54.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 242704574 + NM_001287249 D2HGDH 1 0.38 0.11 7 5.79 81.16 26 6.91 Yes NA NA NA 0 0 No -25 0.49 No 45 37.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 242707127 + NM_001287249 D2HGDH 1 0.93 0.24 14 -8.43 72.33 28 6.32 Yes 15 1.88 Yes 24 0.92 Yes -27 0.86 Yes 43 86.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 59708743 + NM_001270520 DAAM1 1 0.52 0.24 15 8.86 89.29 27 7.06 Yes 14 0.68 No 0 0 No -26 0.54 No 44 55.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 59730483 + NM_001270520 DAAM1 1 0.34 0.26 14 9.58 91.08 22 6.56 Yes 9 0.65 No 0 0 No -21 0.91 Yes 49 88.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 59730929 + NM_001270520 DAAM1 1 0.37 0.29 20 7.38 83.15 25 5.5 No 12 0.58 No 0 0 No -24 0.68 Yes 46 63.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 59791071 + NM_001270520 DAAM1 1 0.52 0.19 11 -14.73 78.02 44 7.43 Yes 31 0.01 No 0 0 No -27 0.59 No 43 45.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 59808115 + NM_001270520 DAAM1 1 0.3 0.26 15 7.42 92.12 32 5.62 Yes 19 0.67 No 0 0 No -31 0.52 No 39 58.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 59823138 + NM_001270520 DAAM1 1 0.23 0.19 12 6.69 89.89 25 6.07 Yes 12 0.52 No 0 0 No -24 0.72 Yes 46 75.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 39832214 + NM_001201427 DAAM2 1 0.5 0.13 7 -0.8 0 9 3.87 No 48 0.01 No 0 0 No -30 0.87 Yes 40 93.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 59111975 + NR_046095 DACT1 1 52.39 17.85 70 9.85 84.8 13 5.56 Yes 30 1.97 Yes 26 0.86 Yes -26 0.82 Yes 44 93.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23036066 - NM_001344 DAD1 1 0.38 3.35 67 10.54 85.38 36 5.56 Yes 68 0.82 Yes 35 0.69 Yes -35 0.84 Yes 35 92.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23040865 - NM_001344 DAD1 1 0.16 1.47 47 11.9 89.51 29 5.48 No 61 0.06 No 0 0 No -31 0.79 Yes 39 56.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 23040905 - NM_001344 DAD1 1 0.04 0.35 19 7.73 92.76 34 4.62 No 21 0.08 No 0 0 No -34 0.45 No 36 64.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 23047869 - NM_001344 DAD1 1 0.26 2.68 36 7.26 91.92 32 6.08 Yes 4 0.99 Yes 0 0 No -27 0.83 Yes 43 90.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23049795 - NM_001344 DAD1 1 0.11 0.99 45 2.67 76.34 23 3.84 No 52 0.47 No 0 0 No -22 0.86 Yes 48 66.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 23049813 - NM_001344 DAD1 1 0.01 0.1 7 -4.77 61.46 47 7.07 Yes 34 0.48 No 0 0 No -45 0.53 No 27 70.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6468288 - NM_139179 DAGLB 1 1.78 0.17 10 2.43 69.26 39 6.96 Yes 14 1.71 Yes 0 0 No -26 0.78 Yes 44 79.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6485480 - NM_139179 DAGLB 1 2.1 0.43 19 5.81 77.37 28 5.75 Yes 6 0.82 Yes 0 0 No -27 0.86 Yes 43 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49053157 - NM_018114 DALRD3 1 0.24 0.11 7 -12.66 0 11 4.12 No 65 -4.74 No 21 0.8 Yes -8 0.21 No 16 41.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 49053494 - NM_018114 DALRD3 1 34.41 9.67 72 6.27 83.93 23 5.39 No 10 0.32 No 22 0.89 Yes -22 0.67 Yes 48 69.1 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 49054278 - NM_018114 DALRD3 1 0.7 0.42 20 -2 71.22 19 5.68 Yes 6 1.85 Yes 0 0 No -26 0.75 Yes 44 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 10732797 - NM_004394 DAP 1 0.45 1.4 52 9.15 83.15 22 6.36 Yes 9 0.93 Yes 0 0 No -21 0.6 No 49 72.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 10734381 - NM_004394 DAP 1 1.04 3.21 67 14.66 88.89 49 4.85 No 58 -1.39 No 33 0.21 Yes -44 0.62 No 37 37.88 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 10750505 - NM_004394 DAP 1 0.28 0.47 25 9.2 85.79 35 6.93 Yes 48 0.54 No 0 0 No -34 0.94 Yes 36 91.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155678823 + NM_033657 DAP3 1 0.21 0.1 7 3.85 80.19 25 7.48 Yes 12 1.1 Yes 24 0.85 Yes -24 0.85 Yes 46 95.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155696626 + NM_033657 DAP3 1 0.1 0.31 14 -2.73 0 14 3.87 No 39 -1.71 No 23 0.28 Yes -13 0.55 No 57 27.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 155695878 + NM_033657 DAP3 1 0.08 0.26 15 2.51 0 18 4.12 No 53 0.39 No 0 0 No -30 0.45 No 44 69.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155695924 + NM_033657 DAP3 1 0.62 1.81 57 4.74 84.41 42 7.41 Yes 29 1.3 Yes 41 0.57 Yes -41 0.69 Yes 29 73.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155696403 + NM_033657 DAP3 1 0.08 0.25 14 7.97 93.14 20 5.1 No 7 1.03 Yes 0 0 No -19 0.9 Yes 51 93.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155697473 + NM_033657 DAP3 1 0.05 0.17 10 3.96 71.65 13 5.24 No 66 0.13 No 0 0 No -28 0.65 No 42 60.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155701709 + NM_033657 DAP3 1 0.02 0.1 7 8.96 88.14 34 5.92 Yes 21 1.33 Yes 22 0.89 Yes -33 0.89 Yes 37 94.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155701714 + NM_033657 DAP3 1 0.03 0.14 9 3.7 0 39 6.32 Yes 26 1.33 Yes 22 0.89 Yes -38 0.89 Yes 32 90.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155706398 + NM_033657 DAP3 1 0.23 0.93 37 2.5 0 26 7 Yes 13 1.22 Yes 25 0.81 Yes -25 0.88 Yes 45 92.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155706740 + NM_033657 DAP3 1 0.19 0.76 34 1.73 0 35 8.38 Yes 22 1.71 Yes 0 0 No -34 0.63 No 36 96.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 155707075 + NM_033657 DAP3 1 0.05 0.15 10 -2.26 72.6 18 5.31 No 5 0.97 Yes 0 0 No -24 0.45 No 32 75.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 155707956 + NM_033657 DAP3 1 0.31 1.06 44 0.94 0 12 4 No 20 1.56 Yes 0 0 No -32 0.95 Yes 38 95.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 90119458 + NM_001288731 DAPK1 1 0.14 0.17 11 8.13 88.58 34 6.71 Yes 21 1.5 Yes 0 0 No -33 0.96 Yes 37 96.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 90125490 + NM_001288731 DAPK1 1 0.24 0.25 13 7.1 94.55 28 6.24 Yes 49 1.28 Yes 0 0 No -27 0.75 Yes 43 60.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 90134925 + NM_001288731 DAPK1 1 0.1 0.13 9 1.66 73.31 27 5.9 Yes 14 1.39 Yes 0 0 No -26 0.57 No 43 52.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 90152579 + NM_001288731 DAPK1 1 0.57 0.56 28 4.59 65.12 25 6.42 Yes 7 0.26 No 0 0 No -22 0.57 No 48 61.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 90221057 + NM_001288731 DAPK1 1 0.13 0.14 8 10.28 89.72 20 5.1 No 72 0.53 No 0 0 No -20 0.45 No 51 64.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 90252865 + NM_001288731 DAPK1 1 0.45 0.43 18 2.62 0 11 4.12 No 18 1.73 Yes 0 0 No -34 0.49 No 33 69.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 90262685 + NM_001288731 DAPK1 1 0.16 0.15 10 5.29 79.63 34 6.18 Yes 40 1.68 Yes 0 0 No -33 0.51 No 37 69.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 90282692 + NM_001288731 DAPK1 1 0.24 0.26 14 6.87 79.54 65 6.59 Yes 64 0.8 Yes 25 0.76 Yes -25 0.54 No 34 37.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 90301758 + NM_001288731 DAPK1 1 1.48 0.93 36 7.43 88.87 22 5.29 No 9 0.95 Yes 0 0 No -21 0.86 Yes 49 92.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 90312030 + NM_001288731 DAPK1 1 0.36 0.19 11 6.72 78.15 32 9.53 Yes 37 0.72 No 0 0 No -26 0.64 No 44 81.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 90322751 + NM_001288731 DAPK1 1 1.21 0.83 38 8.5 91.79 20 4.38 No 12 1.11 Yes 0 0 No -24 0.9 Yes 46 88.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 100762923 + NM_001306151 DAPP1 1 0.56 1.08 42 8.42 86.38 54 6.41 Yes 12 1.35 Yes 0 0 No -24 0.86 Yes 46 87.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 100764159 + NM_001306151 DAPP1 1 0.1 0.18 9 4.54 77.07 29 5.68 Yes -2 0.21 No 0 0 No -28 0.9 Yes 42 92.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 100786882 + NM_001306151 DAPP1 1 0.08 0.13 9 7.29 78.81 25 6.56 Yes 12 1.16 Yes 0 0 No -24 0.71 Yes 46 87.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 100786952 + NM_001306151 DAPP1 1 0.51 0.78 34 7.18 80.63 35 5.9 Yes 0 1.11 Yes 0 0 No -22 0.42 No 48 44.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 100787208 + NM_001306151 DAPP1 1 0.37 0.57 23 6.84 91.31 21 4.87 No 47 0.95 Yes 0 0 No -42 0.64 No 28 62.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 136672080 - NM_001293312 DARS 1 0.03 0.1 7 -19.05 0 23 7.39 Yes 10 1.47 Yes 0 0 No -22 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 136683398 - NM_001293312 DARS 1 0.18 0.81 40 7.04 84.3 22 4.9 No 69 1.71 Yes 0 0 No -21 0.38 No 43 35.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 136688170 - NM_001293312 DARS 1 0.41 1.72 60 10.02 91.48 30 4.36 No 68 0.03 No 0 0 No -27 0.84 Yes 43 79.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136696120 - NM_001293312 DARS 1 0.63 1.82 53 7.66 80.49 24 5.29 No 70 0.56 No 0 0 No -29 0.66 No 41 52.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 136710853 - NM_001293312 DARS 1 0.13 0.38 21 5.65 83.14 30 6.86 Yes 17 1.18 Yes 0 0 No -29 0.85 Yes 41 89.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 173820973 + NM_018122 DARS2 1 1.42 1.74 51 10.91 90.57 36 7.31 Yes 23 1.8 Yes 35 0.86 Yes -35 0.61 No 35 63.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 173825938 + NM_018122 DARS2 1 0.16 0.24 13 8.83 83.29 28 6.22 Yes 44 0.37 No 0 0 No -27 0.62 No 43 59.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1416455 + NM_170711 DAZAP1 1 0.23 0.78 34 9.22 90.27 22 6.17 Yes 9 0.92 Yes 21 0.9 Yes -21 0.51 No 42 67.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 1417502 + NM_170711 DAZAP1 1 0.05 0.15 8 -5.87 0 34 5.21 No 15 1.09 Yes 0 0 No -33 0.48 No 37 78.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1418199 + NM_170711 DAZAP1 1 0.05 0.25 12 -0.41 69.3 45 8 Yes 32 2.19 Yes 39 0.04 Yes -44 0.88 Yes 26 94.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1421149 + NM_170711 DAZAP1 1 19.25 69.33 72 6.53 82.97 27 7.21 Yes 14 1.64 Yes 23 0.93 Yes -26 0.8 Yes 44 87.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1423418 + NM_170711 DAZAP1 1 0.96 6 72 6.21 76.38 56 5.99 Yes 3 1.08 Yes 0 0 No -19 0.42 No 51 48.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1429833 + NM_170711 DAZAP1 1 0.12 0.4 18 5.58 84.1 19 4.8 No 53 -1.23 No 0 0 No -18 0.79 Yes 52 66.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 51634750 + NM_001136269 DAZAP2 1 0.05 0.14 7 3.11 75.08 10 5.92 Yes 31 -0.78 No 28 0.61 Yes -28 0.65 No 42 87.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 51636113 + NM_001136269 DAZAP2 1 16.09 1.9 56 7.55 90.14 18 6.28 Yes 67 1.81 Yes 25 0.54 Yes -25 0.53 No 45 70.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 51636113 + NM_001136269 DAZAP2 1 1918.22 233.28 72 7.55 90.14 18 6.28 Yes 67 1.81 Yes 25 0.54 Yes -25 0.53 No 45 70.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 87515321 + NM_006716 DBF4 1 0.15 0.31 14 5.46 78.13 47 5.75 Yes -1 0.24 No 0 0 No -28 0.3 No 40 48.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 87516146 + NM_006716 DBF4 1 0.95 1.51 60 1.67 0 25 5.08 No 28 1.38 Yes 23 0.59 Yes -24 0.64 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 87517642 + NM_006716 DBF4 1 0.41 0.5 26 7.25 85.87 26 5.48 No 41 1.21 Yes 0 0 No -25 0.75 Yes 45 86.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87523875 + NM_006716 DBF4 1 0.08 0.1 7 7.72 83 35 6.82 Yes 22 2.01 Yes 0 0 No -34 0.87 Yes 36 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87526611 + NM_006716 DBF4 1 8.6 7.85 72 7.39 83.54 26 6.32 Yes 13 1.04 Yes 22 0.89 Yes -25 0.9 Yes 45 90.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 87529596 + NM_006716 DBF4 1 0.92 1.29 48 5.02 87.02 34 6.7 Yes 21 1.41 Yes 33 0.72 Yes -33 0.58 No 37 74.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 42797430 + NR_036623 DBF4B 1 2.3 0.58 26 7.4 82.42 27 6.32 Yes 14 0.29 No 0 0 No -26 0.52 No 44 66.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 42798611 + NR_036623 DBF4B 1 1.47 0.38 20 8.62 90.89 34 9.21 Yes 21 1.65 Yes 0 0 No -33 0.75 Yes 37 86.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42807249 + NR_036623 DBF4B 1 0.51 0.17 9 8.46 93.27 31 7.21 Yes 18 1.03 Yes 25 0.77 Yes -30 0.9 Yes 40 92.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42818768 + NR_036623 DBF4B 1 32.94 6.38 72 4.31 71.69 25 6.44 Yes 12 0.89 Yes 24 0.72 Yes -45 0.31 No 34 49.53 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 42823792 + NR_036623 DBF4B 1 0.96 0.32 18 14.18 95.65 26 5.66 Yes 13 0.57 No 0 0 No -25 0.9 Yes 45 85.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 120126604 + NM_001079863 DBI 1 0.09 1.56 51 6.88 82.61 23 5.39 No 63 -1.76 No 0 0 No -19 0.74 Yes 51 64.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 120126607 + NM_001079863 DBI 1 0.02 0.31 18 1 74.97 26 5.66 Yes 66 -1.75 No 0 0 No -22 0.74 Yes 48 57.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 176892853 - NM_080881 DBN1 1 0.15 0.13 8 4.74 84.41 31 6 Yes 14 1.03 Yes 0 0 No -26 0.81 Yes 44 87.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44093033 + NM_001122956 DBNL 1 0.04 0.1 7 5.07 83 29 5.48 No 16 0.55 No 0 0 No -28 0.88 Yes 42 91.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44096325 + NM_001122956 DBNL 1 0.05 0.14 8 2.24 62.38 35 6 Yes 68 1.27 Yes 32 0.06 Yes -34 0.92 Yes 36 91.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44097571 + NM_001122956 DBNL 1 0.18 0.64 28 8.18 77.97 35 6.08 Yes 44 1.06 Yes 34 0.84 Yes -34 0.84 Yes 36 88.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44097730 + NM_001122956 DBNL 1 0.32 1.07 42 -1.39 76.23 28 5.2 No 15 0.54 No 0 0 No -27 0.84 Yes 43 78.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44098030 + NM_001122956 DBNL 1 266.01 215.83 72 8.26 86.07 31 6.05 Yes 18 0.85 Yes 27 0.89 Yes -30 0.92 Yes 40 93.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44098500 + NM_001122956 DBNL 1 2870.25 355.74 72 9.48 91.76 20 5.02 No 31 0.32 No 26 0.83 Yes -26 0.79 Yes 44 81.91 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44098503 + NM_001122956 DBNL 1 1.72 0.22 15 -12.09 70.47 23 5.24 No 34 0.33 No 30 0.22 Yes -29 0.53 No 41 67.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 44099652 + NM_001122956 DBNL 1 0.09 0.36 19 -4.98 0 16 3.87 No 17 1.48 Yes 0 0 No -29 0.8 Yes 41 82.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 137882263 - NM_016216 DBR1 1 1.11 0.79 36 4.03 88.15 56 5.9 Yes 76 0.71 No 0 0 No -19 0.49 No 51 55.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 137890311 - NM_016216 DBR1 1 1.08 0.65 30 3.01 0 43 6.16 Yes 30 0.5 No 42 0.59 Yes -42 0.93 Yes 28 89.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 100666358 - NM_001918 DBT 1 1.2 0.93 41 8.07 89.4 24 4.9 No 46 1.35 Yes 0 0 No -23 0.86 Yes 47 90.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100676681 - NM_001918 DBT 1 0.68 0.57 31 7.27 77.48 30 6.4 Yes 17 1.3 Yes 29 0.92 Yes -29 0.95 Yes 41 96.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 100684899 - NM_001918 DBT 1 0.36 0.32 17 3.41 0 29 6.79 Yes 73 0.51 No 0 0 No -29 0.53 No 41 55.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100684899 - NM_001918 DBT 1 0.14 0.14 9 3.41 0 29 6.79 Yes 73 0.51 No 0 0 No -29 0.53 No 41 55.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100710159 - NM_001918 DBT 1 1.25 0.88 38 6.22 75.18 21 5.2 No 63 -6.08 No 0 0 No -20 0.76 Yes 50 79.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100714642 - NM_001918 DBT 1 7.32 4.78 68 12.39 77.11 38 6.63 Yes 51 1.36 Yes 0 0 No -37 0.93 Yes 33 96.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51452215 - NM_014703 DCAF1 1 0.19 0.18 11 9.08 90 34 5.03 No 52 1.5 Yes 0 0 No -31 0.89 Yes 39 69.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51452263 - NM_014703 DCAF1 1 0.43 0.47 24 4.62 83.55 17 5.51 No 4 1.54 Yes 0 0 No -28 0.63 No 42 69.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 51452942 - NM_014703 DCAF1 1 0.11 0.14 9 1.78 0 35 6.22 Yes 22 1.24 Yes 0 0 No -34 0.79 Yes 36 85.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51463551 - NM_014703 DCAF1 1 0.24 0.25 14 8.15 82.6 28 7.43 Yes 15 1.46 Yes 0 0 No -27 0.77 Yes 43 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51487965 - NM_014703 DCAF1 1 0.09 0.11 7 3.73 84.41 29 5.74 Yes 73 0.64 No 0 0 No -26 0.59 No 42 78.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 51493602 - NM_014703 DCAF1 1 0.29 0.36 21 7.16 89.75 32 7.14 Yes 19 1.09 Yes 0 0 No -31 0.88 Yes 39 87.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51505666 - NM_014703 DCAF1 1 0.18 0.11 8 6.45 79.91 28 5.44 No 57 1 Yes 0 0 No -27 0.92 Yes 43 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51526505 - NM_014703 DCAF1 1 35.44 13.22 72 6.62 90.07 16 5.04 No 3 1.6 Yes 0 0 No -27 0.59 No 43 62.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 51526505 - NM_014703 DCAF1 1 1.88 0.67 31 6.62 90.07 16 5.04 No 3 1.6 Yes 0 0 No -27 0.59 No 43 62.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 51526530 - NM_014703 DCAF1 1 26.85 10.28 72 8.19 84.5 33 6.18 Yes 36 1.2 Yes 0 0 No -32 0.89 Yes 38 78.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51526530 - NM_014703 DCAF1 1 0.59 0.21 12 8.19 84.5 33 6.18 Yes 36 1.2 Yes 0 0 No -32 0.89 Yes 38 78.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51529909 - NM_014703 DCAF1 1 0.39 0.14 9 1.65 88.98 21 4.8 No 33 1.13 Yes 0 0 No -20 0.92 Yes 50 88.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37835858 + NM_024345 DCAF10 1 0.26 0.15 8 0.45 85.69 21 4.67 No 33 0.01 No 0 0 No -20 0.92 Yes 50 91.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37853046 + NM_024345 DCAF10 1 0.32 0.15 8 5.78 88.77 23 8.68 Yes 10 0.22 No 0 0 No -29 0.56 No 41 70.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 37857271 + NM_024345 DCAF10 1 0.13 0.1 7 3.39 74.66 22 4.55 No 17 1.01 Yes 0 0 No -21 0.95 Yes 49 91.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37860624 + NM_024345 DCAF10 1 1.52 0.93 43 6.26 82.02 23 5.31 No 45 0.52 No 0 0 No -25 0.52 No 45 62.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24584723 + NM_181357 DCAF11 1 2.34 0.28 16 1.62 76.34 22 5 No 9 -0.45 No 21 0.95 Yes -21 0.95 Yes 49 87.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24586125 + NM_181357 DCAF11 1 152.44 8.96 72 6.96 81.29 19 6.3 Yes 6 0.3 No 21 0.56 Yes -21 0.71 Yes 49 74.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24590549 + NM_181357 DCAF11 1 0.1 0.18 11 2.08 79.21 21 4.7 No 34 -1.59 No 0 0 No -19 0.3 No 51 27.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 34095867 - NM_015397 DCAF12 1 0.06 0.1 7 5.7 85.55 16 3.94 No 72 0.83 Yes 0 0 No -20 0.73 Yes 50 42.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 104432529 + NM_015420 DCAF13 1 0.05 0.15 11 1.82 80.46 24 6.1 Yes 11 0.83 Yes 0 0 No -26 0.61 No 44 69.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 104433207 + NM_015420 DCAF13 1 0.06 0.14 9 -1.59 0 32 5.94 Yes 44 1.06 Yes 0 0 No -35 0.79 Yes 35 76.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 104433709 + NM_015420 DCAF13 1 0.2 0.69 32 5.6 80.87 24 5.29 No 17 0.19 No 0 0 No -23 0.68 Yes 47 87.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 104439328 + NM_015420 DCAF13 1 0.06 0.14 9 0.76 0 23 6.64 Yes 10 1.48 Yes 0 0 No -40 0.49 No 30 51.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 104443873 + NM_015420 DCAF13 1 0.03 0.13 8 6.97 83.26 26 6 Yes 13 1.49 Yes 0 0 No -25 0.73 Yes 45 89.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 104449429 + NM_015420 DCAF13 1 0.03 0.1 7 5.13 79.69 31 4.93 No 62 1.09 Yes 0 0 No -30 0.87 Yes 40 96.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14063841 + NM_138353 DCAF15 1 0.17 0.1 7 10.84 82.61 27 7.66 Yes 14 0.83 Yes 29 0.75 Yes -29 0.6 No 41 73.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 14066665 + NM_138353 DCAF15 1 0.12 0.13 8 0.93 74.97 22 4.99 No 22 1.28 Yes 0 0 No -21 0.94 Yes 49 90.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14070395 + NM_138353 DCAF15 1 0.3 0.14 10 -6.13 68.98 26 5.63 Yes 70 -0.83 No 23 0.66 Yes -29 0.58 No 40 55.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 14070584 + NM_138353 DCAF15 1 0.32 0.17 11 -6.21 0 15 3.87 No 2 0.72 No 0 0 No -14 0.66 No 32 56.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 14071282 + NM_138353 DCAF15 1 0.78 0.42 23 -3.62 0 13 3.39 No 11 1.86 Yes 0 0 No -23 0.73 Yes 47 70.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 17806380 - NM_001345885 DCAF16 1 29.96 9.25 72 8.14 91.58 18 4.88 No 18 0.38 No 23 0.8 Yes -25 0.75 Yes 45 55.46 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 172298368 + NM_025000 DCAF17 1 0.47 0.36 19 6.78 77.57 30 5.68 Yes 67 0.5 No 0 0 No -30 0.64 No 40 79.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 172298622 + NM_025000 DCAF17 1 0.84 0.71 39 9.42 95.55 26 5.99 Yes 22 0.27 No 0 0 No -26 0.65 No 44 65.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 172303895 + NM_025000 DCAF17 1 19.79 10.58 72 4.36 83.57 48 6.16 Yes 35 1.45 Yes 31 0.76 Yes -31 0.81 Yes 39 83.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 172304196 + NM_025000 DCAF17 1 4.42 2.22 55 9.02 84.08 26 5.92 Yes 74 0.53 No 0 0 No -29 0.71 Yes 42 78.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 172306566 + NM_025000 DCAF17 1 0.78 0.46 24 5.8 81.82 21 6.11 Yes 8 1.15 Yes 0 0 No -20 0.77 Yes 50 73.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172309620 + NM_025000 DCAF17 1 0.22 0.14 8 0.77 66.27 21 5 No 19 0.78 Yes 20 0.83 Yes -18 0.42 No 52 31.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 172309637 + NM_025000 DCAF17 1 4.96 2.79 67 2.09 0 25 5.1 No 36 0.78 Yes 0 0 No -24 0.88 Yes 46 92.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172313731 + NM_025000 DCAF17 1 0.64 0.42 11 11.56 84.58 31 5.66 Yes 10 0.51 No 0 0 No -30 0.66 No 40 74.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 172316936 + NM_025000 DCAF17 1 3.09 1.1 44 7.81 80.82 27 5.19 No 14 1.22 Yes 0 0 No -26 0.93 Yes 44 93.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172316936 + NM_025000 DCAF17 1 0.84 0.32 16 7.81 80.82 27 5.19 No 14 1.22 Yes 0 0 No -26 0.93 Yes 44 93.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172325828 + NM_025000 DCAF17 1 2.25 0.78 38 6.19 74.83 20 5.22 No 31 1.29 Yes 0 0 No -19 0.93 Yes 51 95.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 73406959 + NM_181340 DCAF4 1 11.04 4.08 70 1.74 64.58 36 6.24 Yes -1 0.44 No 28 0.73 Yes -35 0.65 No 17 39.48 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 73408977 + NM_181340 DCAF4 1 0.41 0.19 12 2.57 65.38 32 5.83 Yes 66 0.25 No 20 0.88 Yes -20 0.69 Yes 50 52.67 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 73412595 + NM_181340 DCAF4 1 2.49 0.94 38 7.42 0 31 7.02 Yes 18 0.88 Yes 26 0.86 Yes -30 0.56 No 40 64.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 73420868 + NM_181340 DCAF4 1 110.86 16.36 72 6.97 76.24 21 6.12 Yes 8 -0.36 No 20 0.53 Yes -20 0.67 Yes 50 72.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 69556770 - NM_001284207 DCAF5 1 0.55 0.39 23 5.82 86.83 19 4.69 No 59 0.75 No 0 0 No -25 0.51 No 45 68.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69556783 - NM_001284207 DCAF5 1 0.31 0.18 10 -1.22 0 13 4.12 No 46 0.74 No 0 0 No -24 0.49 No 46 35.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69557874 - NM_001284207 DCAF5 1 2.92 1.83 55 6.64 89.5 24 6.16 Yes 11 2.41 Yes 23 0.96 Yes -23 0.85 Yes 47 93.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 69570096 - NM_001284207 DCAF5 1 0.54 0.4 27 8.07 74.92 38 5.59 Yes 15 1.16 Yes 0 0 No -27 0.59 No 43 71.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69582566 - NM_001284207 DCAF5 1 1.55 1.18 49 7.5 78.57 25 4.93 No 12 0.21 No 0 0 No -29 0.81 Yes 41 77.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69584912 - NM_001284207 DCAF5 1 0.55 0.29 16 3.17 76.02 17 5.44 No 4 0.67 No 29 0.76 Yes -29 0.46 No 54 55.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 69584993 - NM_001284207 DCAF5 1 19.33 10.33 72 6.35 85.28 72 7.85 Yes 0 -0.6 No 36 0.35 Yes -39 0.71 Yes 19 62.52 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 167922218 + NM_001198956 DCAF6 1 0.12 0.15 8 3.54 71.85 66 7.97 Yes 67 0.24 No 0 0 No -48 0.52 No 24 82.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 167936986 + NM_001198956 DCAF6 1 0.48 0.75 35 6.84 82.81 48 8.29 Yes 44 1.3 Yes 0 0 No -48 0.54 No 22 76.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 167956781 + NM_001198956 DCAF6 1 0.09 0.13 9 5.01 73.77 31 7.4 Yes 18 1.94 Yes 0 0 No -24 0.66 No 46 88.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 167973110 + NM_001198956 DCAF6 1 0.11 0.14 10 -17.65 66.41 25 4.62 No 32 1.65 Yes 0 0 No -24 0.77 Yes 46 43.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 168013825 + NM_001198956 DCAF6 1 0.68 1.03 40 -3.03 71.65 27 6.31 Yes 8 0.36 No 0 0 No -26 0.84 Yes 44 81.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 168014146 + NM_001198956 DCAF6 1 0.09 0.17 11 -2.66 0 14 4.24 No 1 0.59 No 0 0 No -31 0.76 Yes 39 81.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 168044277 + NM_001198956 DCAF6 1 0.73 0.81 34 8.9 86.3 32 7.26 Yes 19 0.06 No 0 0 No -31 0.83 Yes 39 91.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 61671564 + NM_005828 DCAF7 1 0.04 0.1 7 9.87 88.02 27 6.72 Yes 8 1.2 Yes 26 0.84 Yes -26 0.59 No 44 81.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 160190355 - NR_028103 DCAF8 1 0.32 0.33 19 6.67 94.87 27 5.1 No 50 0.95 Yes 23 0.93 Yes -26 0.9 Yes 44 89.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160191001 - NR_028103 DCAF8 1 1.32 1.39 49 9.37 84.69 32 5.71 Yes 19 0.69 No 0 0 No -31 0.61 No 39 65.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160206977 - NR_028103 DCAF8 1 0.27 0.42 22 11.43 94.81 30 6 Yes 55 1.33 Yes 0 0 No -21 0.48 No 43 56.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160212439 - NR_028103 DCAF8 1 0.1 0.13 7 8.48 85.15 28 5.81 Yes 15 0.76 No 0 0 No -27 0.82 Yes 43 86.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160225267 - NR_028103 DCAF8 1 1.25 1.25 49 5.27 85.02 29 6.15 Yes 0 0.91 Yes 0 0 No -28 0.87 Yes 42 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160231116 - NR_028103 DCAF8 1 1 0.25 14 2.92 90.42 24 4.8 No 32 1.06 Yes 23 0.57 Yes -16 0.39 No 54 49.53 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 160231141 - NR_028103 DCAF8 1 2.66 0.88 39 1.7 0 11 4.12 No 7 1.08 Yes 23 0.52 Yes -31 0.66 Yes 39 75.94 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160231188 - NR_028103 DCAF8 1 0.94 0.29 19 1.5 73.35 37 6.25 Yes 24 0.05 No 23 0.52 Yes -26 0.92 Yes 44 88.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160231191 - NR_028103 DCAF8 1 1.96 0.6 32 2.68 86.2 34 6.02 Yes 21 0.06 No 23 0.52 Yes -23 0.9 Yes 47 88.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 43104186 - NM_001288655 DCAKD 1 0.18 0.21 13 7.73 82.57 24 5 No 11 0.84 Yes 0 0 No -23 0.96 Yes 47 89.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 43111411 - NM_001288655 DCAKD 1 8.61 7.49 72 7.22 81.14 22 5.72 Yes 9 0.86 Yes 21 0.95 Yes -21 0.78 Yes 49 81.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 117829177 + NM_173674 DCBLD1 1 1.69 0.36 21 7.43 78.42 40 9.06 Yes 27 1.43 Yes 23 0.48 Yes -43 0.64 No 27 69.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 117860424 + NM_173674 DCBLD1 1 0.92 0.19 12 -3.06 0 13 4 No 14 0.22 No 0 0 No -12 0.39 No 36 52.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 71859987 + NM_000788 DCK 1 0.69 0.39 18 8.13 84.38 27 4.46 No -1 1.12 Yes 0 0 No -22 0.69 Yes 48 92.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 71889263 + NM_000788 DCK 1 0.11 0.14 8 0.65 66.96 46 6.53 Yes 53 1.19 Yes 18 0.78 Yes -45 0.74 Yes 25 40.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 71894339 + NM_000788 DCK 1 0.46 0.39 23 3.41 0 29 4.77 No 55 0.91 Yes 28 0.8 Yes -28 0.56 No 42 60.62 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 115596215 - NM_014881 DCLRE1A 1 0.19 0.13 7 5.09 68.33 50 7.68 Yes 76 1 Yes 0 0 No -38 0.47 No 22 59.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 115602273 - NM_014881 DCLRE1A 1 0.55 0.38 23 8 83.53 25 5.85 Yes 48 2.35 Yes 23 0.76 Yes -30 0.59 No 40 76.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 114453762 + NM_022836 DCLRE1B 1 1.72 0.68 28 -1.56 0 17 4.22 No 45 0.79 Yes 0 0 No -58 0.6 No 12 73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 14953330 - NM_001033858 DCLRE1C 1 3.46 1.28 48 8.43 94.12 33 6.54 Yes 20 0.94 Yes 40 0.6 Yes -32 0.73 Yes 38 55.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 14960620 - NM_001033858 DCLRE1C 1 0.45 0.17 11 5.63 75.84 36 5.89 Yes 23 1.12 Yes 0 0 No -35 0.55 No 35 84.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 14962444 - NM_001033858 DCLRE1C 1 5.73 3.03 63 4.74 69.54 29 6.99 Yes 65 -5.23 No 28 0.86 Yes -28 0.87 Yes 42 95.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 14964074 - NM_001033858 DCLRE1C 1 0.2 0.11 8 2.98 80.92 22 4.69 No 64 0.45 No 0 0 No -21 0.88 Yes 49 82.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 14987565 - NM_001033858 DCLRE1C 1 10.22 1.17 50 6.47 84.89 23 5.92 Yes 36 0.63 No 22 0.78 Yes -23 0.79 Yes 48 77.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 14987565 - NM_001033858 DCLRE1C 1 22.28 2.67 63 6.47 84.89 23 5.92 Yes 36 0.63 No 22 0.78 Yes -23 0.79 Yes 48 77.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 14989635 - NM_001033858 DCLRE1C 1 1.38 0.17 10 3.69 68.38 14 4.68 No 26 1.2 Yes 31 0.62 Yes -25 0.5 No 40 83.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 53321634 - NM_001290207 DCP1A 1 0.78 0.5 29 3.4 0 15 3.12 No 53 1.73 Yes 0 0 No -17 0.85 Yes 53 77.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 2057562 - NR_135060 DCP1B 1 0.3 0.17 9 8.97 86.95 30 7.39 Yes 37 1.01 Yes 0 0 No -29 0.48 No 36 79.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 2058408 - NR_135060 DCP1B 1 0.47 0.28 17 5.17 73.98 46 8.22 Yes 73 0.97 Yes 0 0 No -45 0.61 No 25 82.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 2070562 - NR_135060 DCP1B 1 0.56 0.44 24 9.06 85.46 33 5.9 Yes 20 0.12 No 32 0.27 Yes -28 0.39 No 38 76.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 2106690 - NR_135060 DCP1B 1 0.5 0.32 17 3.99 83.28 22 6.21 Yes 9 1.19 Yes 0 0 No -25 0.89 Yes 45 94.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 112316738 + NM_152624 DCP2 1 6.13 5.9 71 8.34 87.11 22 7.2 Yes 9 0.76 No 0 0 No -30 0.62 No 40 80.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 112316740 + NM_152624 DCP2 1 0.24 0.21 12 -1.45 84.41 24 7.31 Yes 11 0.75 No 0 0 No -23 0.69 Yes 38 77.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 112316744 + NM_152624 DCP2 1 0.11 0.1 7 -4.27 0 9 3.87 No 15 0.73 No 0 0 No -36 0.56 No 34 61.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 112319670 + NM_152624 DCP2 1 7.41 7.06 71 10.42 92.34 29 5.99 Yes 16 0.73 No 28 0.83 Yes -28 0.95 Yes 42 94.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 112327808 + NM_152624 DCP2 1 0.07 0.1 7 -6.25 0 14 4.9 No 1 0.06 No 22 0.76 Yes -13 0.58 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 112327815 + NM_152624 DCP2 1 0.13 0.17 12 -4.6 0 21 5.5 No -1 1.22 Yes 22 0.76 Yes -20 0.56 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 112328191 + NM_152624 DCP2 1 0.39 0.44 21 5.31 76.57 27 5.66 Yes 14 0.25 No 0 0 No -26 0.46 No 37 59.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 112328802 + NM_152624 DCP2 1 0.53 0.5 24 7.38 85.61 22 7.8 Yes 9 0.79 Yes 0 0 No -22 0.58 No 46 55.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 112344725 + NM_152624 DCP2 1 0.14 0.18 9 8.1 85.22 20 7.14 Yes 7 1.31 Yes 0 0 No -19 0.78 Yes 51 91.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 112346455 + NM_152624 DCP2 1 0.21 0.26 16 0.58 70.49 51 6.79 Yes 38 1.2 Yes 0 0 No -40 0.66 No 20 85.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 126201332 + NM_014026 DCPS 1 0.05 0.13 8 5.81 82.46 29 5.77 Yes 45 -1.86 No 0 0 No -25 0.46 No 45 55.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 126179501 + NM_014026 DCPS 1 0.19 0.49 18 7.23 74.95 35 6.18 Yes 22 0.08 No 0 0 No -34 0.69 Yes 36 71.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 126191335 + NM_014026 DCPS 1 0.19 0.56 26 10.63 88.34 30 5.61 Yes 31 1.14 Yes 0 0 No -25 0.84 Yes 45 89.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 126200088 + NM_014026 DCPS 1 0.45 1.21 47 8.21 98.76 26 7.21 Yes 13 1.29 Yes 0 0 No -25 0.94 Yes 45 96.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 126201332 + NM_014026 DCPS 1 0.1 0.25 16 5.81 82.46 29 5.77 Yes 45 -1.86 No 0 0 No -25 0.46 No 45 55.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 126207525 + NM_014026 DCPS 1 0.23 0.42 21 9.42 73.38 24 5.59 Yes 11 0.65 No 0 0 No -23 0.64 No 47 83.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 183837693 - NM_001921 DCTD 1 5.87 1.72 53 7.47 80.9 26 6.17 Yes 32 0.9 Yes 25 0.55 Yes -25 0.83 Yes 45 61.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 183838011 - NM_001921 DCTD 1 2.42 0.71 32 9.59 88.38 27 4.92 No 46 1.79 Yes 26 0.64 Yes -20 0.7 Yes 44 67.53 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 74590756 - NM_001190836 DCTN1 1 1.06 1.94 58 -1.51 0 50 9.61 Yes 37 2.12 Yes 20 0.22 Yes -49 0.56 No 21 90.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 74595012 - NM_001190836 DCTN1 1 0.06 0.13 8 -2.88 0 11 4.12 No 60 1.93 Yes 24 0.96 Yes -29 0.4 No 53 40.06 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 74595255 - NM_001190836 DCTN1 1 0.08 0.11 7 2.19 0 36 6 Yes 50 1.33 Yes 0 0 No -35 0.69 Yes 35 50.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 74596615 - NM_001190836 DCTN1 1 0.07 0.1 7 -2.73 0 32 4.19 No 52 0.57 No 0 0 No -31 0.67 Yes 39 53.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 74600076 - NM_001190836 DCTN1 1 1.67 3.6 71 6.57 85.7 121 8.53 Yes 73 2.23 Yes 34 0.6 Yes -34 0.81 Yes 36 87.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 74601468 - NM_001190836 DCTN1 1 0.11 0.25 13 -1.56 0 147 13.48 Yes -3 0 No 36 0.03 Yes -59 0.33 No 28 9.02 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 74604592 - NM_001190836 DCTN1 1 0.06 0.11 8 -10.32 80.79 36 5.22 No 67 0.2 No 0 0 No -28 0.51 No 40 68.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57924553 - NM_001261413 DCTN2 1 0.33 0.97 41 -0.43 0 16 3.87 No 16 0.63 No 0 0 No -28 0.44 No 32 63.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57925882 - NM_001261413 DCTN2 1 0.04 0.11 8 0.93 0 18 4.12 No 17 0.88 Yes 0 0 No -29 0.89 Yes 41 87.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57926132 - NM_001261413 DCTN2 1 0.05 0.13 8 1.45 75.89 16 6.08 Yes 3 0.96 Yes 35 0.39 Yes -21 0.43 No 55 50.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57926591 - NM_001261413 DCTN2 1 0.08 0.17 12 -9.71 71.03 30 7.09 Yes 17 1.04 Yes 0 0 No -32 0.77 Yes 38 90.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57932131 - NM_001261413 DCTN2 1 0.04 0.11 8 6.03 74.26 35 4.09 No 57 0.63 No 28 0.64 Yes -34 0.48 No 36 62.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 57932308 - NM_001261413 DCTN2 1 0.04 0.1 7 -4.21 51.26 99 8.61 Yes 55 2.06 Yes 20 0.79 Yes -37 0.73 Yes 33 77.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57936966 - NM_001261413 DCTN2 1 0.1 0.24 15 5.28 82.52 19 7.07 Yes 6 1.25 Yes 18 0.71 Yes -18 0.67 Yes 52 79.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 34613891 - NM_024348 DCTN3 1 0.11 0.18 11 -10.62 0 15 4.05 No 56 1.65 Yes 32 0.8 Yes -14 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 34613899 - NM_024348 DCTN3 1 0.1 0.18 12 6.26 84.1 61 8.23 Yes 48 1.65 Yes 25 0.52 Yes -25 0.51 No 24 34.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 34613899 - NM_024348 DCTN3 1 0.4 0.71 38 6.26 84.1 61 8.23 Yes 48 1.65 Yes 25 0.52 Yes -25 0.51 No 24 34.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 34615440 - NM_024348 DCTN3 1 0.1 0.28 17 5.39 84.47 25 4.44 No 58 0.57 No 0 0 No -24 0.64 No 46 54.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 34616088 - NM_024348 DCTN3 1 0.3 0.61 33 5.73 93.2 13 4.9 No 42 0.64 No 0 0 No -25 0.55 No 16 52.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 150093675 - NM_001135644 DCTN4 1 0.34 0.28 17 7.41 87.64 23 5.2 No 10 0.92 Yes 0 0 No -22 0.93 Yes 48 93.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 150135130 - NM_001135644 DCTN4 1 0.46 0.6 28 7.98 93.23 19 5.83 Yes 6 0.96 Yes 21 0.55 Yes -33 0.84 Yes 37 84.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 23671708 + NR_037573 DCTN5 1 0.21 0.47 25 5.83 82.66 30 5.57 Yes 38 0.04 No 0 0 No -29 0.96 Yes 41 91.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23676933 + NR_037573 DCTN5 1 0.05 0.13 7 0.9 70.68 21 5.71 Yes 8 1.54 Yes 18 0.82 Yes -20 0.66 No 50 71.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 23678337 + NR_037573 DCTN5 1 3.59 7.99 72 5.26 72.18 22 6.28 Yes 9 0.98 Yes 22 0.81 Yes -22 0.58 No 48 67.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 23680763 + NR_037573 DCTN5 1 0.07 0.15 9 5.43 85.8 25 5.1 No 57 -3.9 No 0 0 No -27 0.74 Yes 43 74.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 30038078 + NM_006571 DCTN6 1 0.06 0.13 8 0.06 62.02 50 7.13 Yes 70 -6.26 No 0 0 No -37 0.54 No 21 66.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 30037338 + NM_006571 DCTN6 1 0.38 0.74 34 9.43 96.97 9 4.3 No 65 -4.11 No 0 0 No -24 0.9 Yes 46 93.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30435851 - NM_024096 DCTPP1 1 0.05 0.17 9 1.35 0 35 5.29 No 22 1.04 Yes 0 0 No -39 0.74 Yes 31 91.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 182671781 - NM_001308101 DCUN1D1 1 0.06 0.11 8 9.83 91.14 27 5.64 Yes 35 0.74 No 0 0 No -26 0.81 Yes 44 83.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 52714370 + NM_015115 DCUN1D4 1 0.9 0.43 19 5.64 78.91 25 6.85 Yes 62 1.22 Yes 24 0.83 Yes -24 0.81 Yes 46 89.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 52726708 + NM_015115 DCUN1D4 1 1.09 0.5 27 5.57 85.3 17 5.5 No 0 0.53 No 20 0.48 Yes -20 0.84 Yes 50 78.1 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 52740883 + NM_015115 DCUN1D4 1 0.35 0.35 18 5.66 80.89 27 5.57 Yes 59 0.5 No 29 0.41 Yes -24 0.55 No 44 53.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 52740886 + NM_015115 DCUN1D4 1 4.24 3.79 71 7.51 90.28 30 5.83 Yes 62 0.5 No 29 0.41 Yes -27 0.58 No 41 51.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 52742817 + NM_015115 DCUN1D4 1 0.35 0.32 16 6.91 85.81 22 5.2 No 73 -3.23 No 0 0 No -29 0.85 Yes 41 93.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 52753288 + NM_015115 DCUN1D4 1 1 0.65 35 3.18 84.41 21 5.54 No 8 0.81 Yes 27 0.93 Yes -20 0.59 No 43 79.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 52755437 + NM_015115 DCUN1D4 1 0.31 0.22 12 8.39 87.05 49 5.86 Yes 25 0.3 No 0 0 No -28 0.72 Yes 42 55.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 52757929 + NM_015115 DCUN1D4 1 0.29 0.19 13 -0.91 0 77 6.67 Yes 64 1.19 Yes 30 0.42 Yes -26 0.5 No 29 42.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 52759212 + NM_015115 DCUN1D4 1 0.15 0.11 7 4.3 68.5 29 5.91 Yes 16 0.87 Yes 0 0 No -28 0.63 No 42 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 52777235 + NM_015115 DCUN1D4 1 8.07 0.6 32 9.27 87.34 26 9.22 Yes 13 1.22 Yes 25 0.94 Yes -25 0.97 Yes 45 96.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 52771354 + NM_015115 DCUN1D4 1 6.14 0.51 23 4.81 70.2 30 6.57 Yes 17 1.18 Yes 29 0.8 Yes -29 0.57 No 41 74.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 52775085 + NM_015115 DCUN1D4 1 29.93 2.29 59 8.41 85.43 23 6.36 Yes 10 0.88 Yes 29 0.65 Yes -29 0.64 No 41 58.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 52777235 + NM_015115 DCUN1D4 1 577.45 44.13 72 9.27 87.34 26 9.22 Yes 13 1.22 Yes 25 0.94 Yes -25 0.97 Yes 45 96.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 102950727 - NM_001318739 DCUN1D5 1 0.14 0.26 13 7.91 87.41 28 6.93 Yes 15 1.43 Yes 27 0.85 Yes -27 0.93 Yes 43 93.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 102951320 - NM_001318739 DCUN1D5 1 0.1 0.18 13 6.22 82.44 29 7.11 Yes 16 1.56 Yes 0 0 No -28 0.72 Yes 42 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 102951734 - NM_001318739 DCUN1D5 1 6.76 10.74 72 9.94 88.27 24 5.41 No 22 0.83 Yes 0 0 No -20 0.73 Yes 44 64.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 79993938 - NM_001195218 DCXR 1 1.12 2.42 68 -5.77 72.96 22 7.14 Yes 9 2.39 Yes 0 0 No -21 0.76 Yes 49 78.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79994157 - NM_001195218 DCXR 1 0.12 0.24 13 -1.5 0 20 4.54 No -2 0.09 No 0 0 No -49 0.47 No 56 32.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79994314 - NM_001195218 DCXR 1 0.1 0.14 8 -3.4 0 17 4.44 No 71 1.37 Yes 31 0.42 Yes -32 0.53 No 38 52.19 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79994344 - NM_001195218 DCXR 1 0.21 0.29 16 -7.45 0 18 4.36 No 41 1.39 Yes 25 0.82 Yes -36 0.66 No 46 46.45 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79994348 - NM_001195218 DCXR 1 0.24 0.32 20 -3.12 0 14 3.87 No 37 1.39 Yes 25 0.82 Yes -32 0.63 No 50 52.69 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79994550 - NM_001195218 DCXR 1 0.16 0.26 14 -4.65 0 12 4.24 No 32 0.33 No 21 0.93 Yes -26 0.37 No 63 35.15 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79994606 - NM_001195218 DCXR 1 0.15 0.24 14 8.1 77.58 22 5.46 No 48 1.76 Yes 0 0 No -21 0.44 No 49 60.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 79994661 - NM_001195218 DCXR 1 0.35 0.5 28 4.61 82.28 13 5.1 No 0 0.63 No 26 0.97 Yes -22 0.64 No 51 68.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79994770 - NM_001195218 DCXR 1 0.39 0.32 18 6.58 80.79 28 7.69 Yes 15 0.39 No 19 0.09 Yes -27 0.48 No 43 62.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79994965 - NM_001195218 DCXR 1 0.57 0.5 23 4.89 70.48 26 7.55 Yes 13 2.04 Yes 25 0.94 Yes -25 0.86 Yes 45 80.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17422923 + NM_024050 DDA1 1 0.47 0.6 29 8.35 89.62 14 6.24 Yes 28 0.02 No 0 0 No -40 0.59 No 30 49.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17424835 + NM_024050 DDA1 1 2.05 2.51 67 4.48 0 53 6.29 Yes 17 1.14 Yes 0 0 No -29 0.97 Yes 41 97.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61068409 - NM_001923 DDB1 1 0.08 0.49 26 -5.71 0 29 5.63 Yes -2 1.42 Yes 28 0.89 Yes -11 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 61070728 - NM_001923 DDB1 1 0.1 0.38 20 8.53 94.65 35 5.4 No 12 0.01 No 0 0 No -24 0.59 No 46 62.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 61077334 - NM_001923 DDB1 1 0.03 0.13 8 3.56 71.98 19 5.67 Yes 46 1.07 Yes 0 0 No -24 0.43 No 46 66.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 61077452 - NM_001923 DDB1 1 0.02 0.13 7 2.6 70.39 17 5.83 Yes 4 1.61 Yes 25 0.86 Yes -23 0.47 No 54 64.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 61077918 - NM_001923 DDB1 1 0.03 0.17 9 4.71 73.38 32 5.56 Yes 37 1.52 Yes 23 0.6 Yes -24 0.92 Yes 46 93.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61079536 - NM_001923 DDB1 1 0.02 0.11 8 0.44 59.54 24 5.48 No 30 0.95 Yes 0 0 No -42 0.83 Yes 28 80.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61081675 - NM_001923 DDB1 1 0.1 0.53 30 -0.04 0 11 4.12 No 37 0.16 No 0 0 No -28 0.46 No 44 66.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 61091860 - NM_001923 DDB1 1 0.06 0.42 19 10.83 92.06 28 6.48 Yes 71 -2.56 No 27 0.64 Yes -27 0.72 Yes 43 85.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47237744 + NM_000107 DDB2 1 0.21 0.64 31 -4.01 68.68 32 5.79 Yes 19 1.69 Yes 0 0 No -31 0.85 Yes 39 92.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47237753 + NM_000107 DDB2 1 0.09 0.19 12 -2.84 0 12 4.24 No 28 1.66 Yes 0 0 No -40 0.88 Yes 30 92.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47238417 + NM_000107 DDB2 1 0.13 0.35 20 -6.62 0 19 4.24 No 18 1.17 Yes 0 0 No -40 0.47 No 40 69.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47238462 + NM_000107 DDB2 1 0.04 0.13 9 0.61 63.82 18 6.72 Yes 63 1.18 Yes 0 0 No -17 0.7 Yes 38 67.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 47238479 + NM_000107 DDB2 1 0.16 0.43 22 5.59 84.49 25 5.1 No 22 0.2 No 0 0 No -22 0.88 Yes 48 69.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 47243929 + NM_000107 DDB2 1 0.03 0.1 7 6.7 85.05 26 6.68 Yes 13 1.01 Yes 0 0 No -29 0.54 No 45 50.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47243929 + NM_000107 DDB2 1 0.89 2.19 61 6.7 85.05 26 6.68 Yes 13 1.01 Yes 0 0 No -29 0.54 No 45 50.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47243933 + NM_000107 DDB2 1 0.58 1.69 52 2.72 0 30 6.92 Yes 17 1 Yes 0 0 No -33 0.5 No 48 47.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47248317 + NM_000107 DDB2 1 0.04 0.17 10 9.91 92.91 45 7.07 Yes 32 0.79 Yes 0 0 No -44 0.9 Yes 26 88.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47259391 + NM_000107 DDB2 1 0.07 0.11 7 1.14 0 92 9.59 Yes 16 1.33 Yes 0 0 No -28 0.75 Yes 42 85.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47254777 + NM_000107 DDB2 1 0.17 0.21 12 3.7 72.59 12 5.01 No 39 0.96 Yes 0 0 No -22 0.59 No 48 41.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47254927 + NM_000107 DDB2 1 0.03 0.1 7 0.71 79.59 27 6.16 Yes 36 1.81 Yes 0 0 No -26 0.93 Yes 44 87.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47256321 + NM_000107 DDB2 1 0.07 0.15 11 0.62 79.53 18 4.41 No 52 2.11 Yes 0 0 No -34 0.62 No 36 67.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47259391 + NM_000107 DDB2 1 0.07 0.17 9 1.14 0 92 9.59 Yes 16 1.33 Yes 0 0 No -28 0.75 Yes 42 85.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47259169 + NM_000107 DDB2 1 0.2 0.51 25 5.88 78.68 23 5.83 Yes 10 1.08 Yes 0 0 No -22 0.86 Yes 48 91.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47259172 + NM_000107 DDB2 1 0.03 0.11 7 4.25 79.31 26 6.08 Yes 13 1.05 Yes 0 0 No -25 0.88 Yes 45 92.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47259391 + NM_000107 DDB2 1 0.61 1.51 42 1.14 0 92 9.59 Yes 16 1.33 Yes 0 0 No -28 0.75 Yes 42 85.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 53518646 - NM_001160147 DDHD1 1 226.64 125.85 72 11.01 94.37 28 5.66 Yes 46 0.37 No 27 0.89 Yes -25 0.55 No 43 63.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 53529860 - NM_001160147 DDHD1 1 0.86 1.21 44 4.04 79.4 38 7 Yes 73 1.02 Yes 0 0 No -37 0.65 No 33 62.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 53552266 - NM_001160147 DDHD1 1 0.06 0.14 8 -3.49 0 18 4.24 No 46 1.74 Yes 0 0 No -17 0.71 Yes 23 73.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 53552279 - NM_001160147 DDHD1 1 0.34 0.68 34 9.18 87.2 46 9.27 Yes 33 1.75 Yes 0 0 No -34 0.71 Yes 36 82.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 53555066 - NM_001160147 DDHD1 1 0.15 0.31 16 9.73 88.97 33 7.33 Yes 20 1.17 Yes 0 0 No -32 0.9 Yes 38 85.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38091917 + NM_001164232 DDHD2 1 1.14 0.68 36 -8.36 0 11 3.87 No 32 0.11 No 38 0.44 Yes -50 0.5 No 20 80.42 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 38095624 + NM_001164232 DDHD2 1 2.61 1.99 57 1.24 73.13 16 4.81 No 22 1.54 Yes 0 0 No -54 0.39 No 27 33.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 38099805 + NM_001164232 DDHD2 1 0.31 0.21 11 5.52 78.77 13 5.57 Yes 52 0.97 Yes 0 0 No -32 0.41 No 38 48.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 38109625 + NM_001164232 DDHD2 1 0.41 0.32 19 -0.06 66.25 21 5.83 Yes 60 1.3 Yes 31 0.69 Yes -20 0.63 No 50 59.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 38118081 + NM_001164232 DDHD2 1 2.67 2.22 59 9.52 84.23 49 6.21 Yes 60 0.5 No 22 0.43 Yes -30 0.5 No 40 58.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 38119055 + NM_001164232 DDHD2 1 2.48 1.99 60 11.36 87.63 33 5.92 Yes 43 0.96 Yes 32 0.89 Yes -32 0.63 No 38 71.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 15960292 + NM_032341 DDI2 1 0.1 0.11 7 6.43 73.61 23 5.52 No 10 1.17 Yes 25 0.88 Yes -25 0.61 No 39 70.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 15962807 + NM_032341 DDI2 1 0.41 0.46 23 8.56 83.98 21 7.07 Yes 8 1.24 Yes 0 0 No -20 0.69 Yes 50 83.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 15973331 + NM_032341 DDI2 1 1.06 0.94 42 5.68 74.46 45 6.93 Yes 32 1.45 Yes 0 0 No -44 0.93 Yes 26 97.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 15976219 + NM_032341 DDI2 1 0.2 0.14 7 2.83 0 32 6.26 Yes 19 1.87 Yes 0 0 No -37 0.41 No 33 55.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 15982915 + NM_032341 DDI2 1 0.37 0.38 20 3.64 70.99 22 5.62 Yes 70 1.13 Yes 25 0.48 Yes -21 0.43 No 45 61.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 82624324 + NM_145018 DDIAS 1 2.96 0.88 37 -2.23 83.28 27 7.07 Yes 5 1.22 Yes 26 0.75 Yes -26 0.74 Yes 44 50.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 82624696 + NM_145018 DDIAS 1 0.5 0.18 10 9.69 84.42 23 5.29 No 40 1.24 Yes 22 0.89 Yes -22 0.86 Yes 48 80.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 82624998 + NM_145018 DDIAS 1 5.88 1.86 55 13.37 87.72 34 6.57 Yes 75 0.7 No 28 0.7 Yes -24 0.4 No 37 42.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 82637154 + NM_145018 DDIAS 1 3.52 1.01 39 4.19 0 26 6 Yes 13 0.81 Yes 0 0 No -26 0.47 No 45 58.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 57910960 - NM_001195057 DDIT3 1 0.26 0.14 8 -5.69 0 38 8.29 Yes 25 1.45 Yes 0 0 No -37 0.71 Yes 33 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 74033982 + NM_019058 DDIT4 1 0.06 0.33 18 4.24 66.87 40 6.52 Yes -1 0.61 No 0 0 No -39 0.73 Yes 31 70.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 20979462 - NM_005216 DDOST 1 0.08 0.54 28 -11.89 77.59 23 6.32 Yes 10 2.18 Yes 0 0 No -22 0.92 Yes 48 90.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 20979521 - NM_005216 DDOST 1 0.03 0.18 10 4.43 0 20 4.48 No 48 0.66 No 0 0 No -19 0.82 Yes 51 74.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 20982294 - NM_005216 DDOST 1 0.03 0.35 20 -5.22 0 14 4.47 No 41 -1.7 No 27 0.94 Yes -13 0.32 No 13 19.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 162674841 + NM_006182 DDR2 1 12.23 1.43 49 11.41 89.9 24 6.43 Yes 34 1.98 Yes 27 0.82 Yes -27 0.81 Yes 43 78.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 162711368 + NM_006182 DDR2 1 4.33 0.6 25 2.98 84.86 17 4.75 No 57 -4.02 No 0 0 No -25 0.54 No 53 37.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 162740441 + NM_006182 DDR2 1 2.64 0.31 19 9.09 83.56 24 5.19 No 19 1.67 Yes 0 0 No -23 0.78 Yes 47 76.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 162743185 + NM_006182 DDR2 1 0.46 0.1 7 0.73 0 20 4.31 No 27 0.5 No 0 0 No -19 0.62 No 50 64.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 3172465 - NM_023935 DDRGK1 1 0.28 0.57 32 6.24 89.37 37 6.55 Yes 24 1.39 Yes 0 0 No -36 0.96 Yes 34 95.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3181096 - NM_023935 DDRGK1 1 0.71 0.71 35 -0.73 0 32 6.77 Yes 19 1.02 Yes 0 0 No -31 0.68 Yes 39 84.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 15732973 + NM_004939 DDX1 1 0.05 0.1 7 6.3 83.82 26 5.05 No 50 1.64 Yes 0 0 No -25 0.84 Yes 45 84.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 15735270 + NM_004939 DDX1 1 0.18 0.46 25 -2.23 80.27 17 6.49 Yes 4 0.48 No 0 0 No -22 0.41 No 36 65.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 15743973 + NM_004939 DDX1 1 0.04 0.15 10 4.33 79.47 31 5.83 Yes 72 0.46 No 0 0 No -30 0.89 Yes 40 86.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 15757334 + NM_004939 DDX1 1 0.08 0.24 9 5.26 80.14 24 5.82 Yes 11 0.7 No 24 0.77 Yes -23 0.86 Yes 47 80.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 15763561 + NM_004939 DDX1 1 0.06 0.21 14 -9.77 62.85 41 7.25 Yes 64 0.43 No 0 0 No -40 0.67 Yes 30 55.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 15763592 + NM_004939 DDX1 1 0.2 0.72 37 -0.16 66.18 22 5.17 No 59 0.23 No 0 0 No -21 0.78 Yes 49 40 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 15768569 + NM_004939 DDX1 1 0.06 0.19 12 -10.3 0 36 7.41 Yes 23 1.81 Yes 0 0 No -35 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 15770158 + NM_004939 DDX1 1 0.41 2.01 54 7.2 84.33 19 5.92 Yes 73 0.77 Yes 0 0 No -23 0.43 No 47 54.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108585275 + NM_004398 DDX10 1 0.23 0.26 11 8.02 82.63 25 6.08 Yes 12 2.36 Yes 0 0 No -24 0.95 Yes 46 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108588062 + NM_004398 DDX10 1 0.32 0.25 13 5.31 84.65 33 6.24 Yes 20 0.5 No 0 0 No -32 0.83 Yes 38 81.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108588081 + NM_004398 DDX10 1 0.56 0.38 21 6.3 96.63 28 5.29 No 39 0.49 No 0 0 No -27 0.77 Yes 45 38.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108602264 + NM_004398 DDX10 1 0.9 0.68 32 3.01 0 38 8.48 Yes 25 0.65 No 0 0 No -32 0.9 Yes 38 94.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108616972 + NM_004398 DDX10 1 0.27 0.21 11 7.63 82.27 29 5.35 No 50 0.92 Yes 0 0 No -28 0.66 Yes 45 69.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108638663 + NM_004398 DDX10 1 1.46 1.13 43 7.7 87.75 31 6.08 Yes 18 0.92 Yes 30 0.68 Yes -31 0.38 No 39 65.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 108709175 + NM_004398 DDX10 1 0.77 0.61 28 -2.34 70.24 36 7.51 Yes 23 1.36 Yes 0 0 No -35 0.86 Yes 35 94.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108717158 + NM_004398 DDX10 1 0.64 0.61 32 2.71 71.96 36 8.87 Yes 23 1.26 Yes 0 0 No -31 0.4 No 39 62.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108729621 + NM_004398 DDX10 1 0.25 0.17 12 6.98 79.2 34 5.9 Yes 2 0.98 Yes 0 0 No -33 0.52 No 37 54.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108768225 + NM_004398 DDX10 1 0.13 0.11 7 9.91 86.51 36 7.95 Yes 23 0.79 Yes 0 0 No -41 0.64 No 29 65.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108800215 + NM_004398 DDX10 1 0.08 0.11 7 6.13 82.62 29 6.69 Yes 16 0.65 No 32 0.27 Yes -28 0.72 Yes 42 71.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 31231111 + NM_030653 DDX11 1 0.45 0.19 14 6.46 81.72 32 6.16 Yes 64 -3.86 No 0 0 No -31 0.86 Yes 39 73.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 31231396 + NM_030653 DDX11 1 1.67 0.76 33 7.15 91.42 36 5.83 Yes 6 0.98 Yes 18 0.61 Yes -39 0.65 No 31 87.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 31237943 + NM_030653 DDX11 1 0.37 0.14 9 1.86 80.08 12 5.09 No 53 1.79 Yes 21 0.45 Yes -21 0.32 No 49 19.99 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 31238947 + NM_030653 DDX11 1 1.59 0.97 41 6.71 77.3 25 5.47 No 12 0.78 Yes 28 0.4 Yes -24 0.8 Yes 46 72.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 31238958 + NM_030653 DDX11 1 0.41 0.31 12 6.24 0 16 4.47 No 23 0.76 No 28 0.4 Yes -15 0.65 No 42 77.69 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 31246182 + NM_030653 DDX11 1 0.53 0.21 14 -3.41 0 27 6.81 Yes 14 0.73 No 0 0 No -27 0.89 Yes 43 89.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 31247726 + NM_030653 DDX11 1 0.42 0.15 10 9.36 91.61 28 5.72 Yes 42 0.77 No 0 0 No -27 0.57 No 52 43.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 31249759 + NM_030653 DDX11 1 0.3 0.18 10 2.02 66.73 35 6.11 Yes 65 -2.72 No 23 0.43 Yes -18 0.69 Yes 52 55.21 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 31253493 + NM_030653 DDX11 1 0.5 0.21 11 6.43 77.63 28 5.83 Yes 27 1.87 Yes 27 0.71 Yes -27 0.82 Yes 43 89.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 31255908 + NM_030653 DDX11 1 2.07 0.64 30 6.51 81.24 30 6.93 Yes 63 1.97 Yes 29 0.9 Yes -29 0.88 Yes 41 90.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 31256255 + NM_030653 DDX11 1 19.47 7.92 72 2.37 0 30 6.56 Yes 17 1.5 Yes 24 0.94 Yes -29 0.93 Yes 41 94.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 9574328 - NR_033399 DDX12P 1 0.82 0.14 8 2.57 75.22 49 7.39 Yes 5 0.02 No 0 0 No -18 0.54 No 57 36.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 9596206 - NR_033399 DDX12P 1 3.43 0.42 23 7.15 91.42 36 5.83 Yes 6 0.98 Yes 0 0 No -39 0.65 No 31 87.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 38885429 - NM_006386 DDX17 1 0.06 0.24 13 -1.81 65.94 43 6.52 Yes 43 0.49 No 0 0 No -18 0.32 No 28 25.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 38885464 - NM_006386 DDX17 1 3.18 9.06 72 3.57 77.55 21 5.92 Yes 45 0.56 No 25 0.64 Yes -25 0.44 No 45 47.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 38886230 - NM_006386 DDX17 1 0.08 0.24 12 5.5 83.3 27 7.07 Yes 14 0.99 Yes 0 0 No -26 0.85 Yes 44 86.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38887160 - NM_006386 DDX17 1 0.05 0.13 8 8.32 87.21 18 5.03 No 5 1.2 Yes 0 0 No -26 0.49 No 44 64.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 38888869 - NM_006386 DDX17 1 0.04 0.18 13 7.48 89.73 25 4.9 No 16 0.23 No 0 0 No -24 0.7 Yes 46 67.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 38890800 - NM_006386 DDX17 1 0.03 0.22 13 0.65 0 13 4.12 No 22 0.66 No 0 0 No -34 0.65 No 36 78.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 38891085 - NM_006386 DDX17 1 0.14 0.93 41 0.11 62.5 16 4.69 No 51 0.69 No 21 0.63 Yes -15 0.45 No 55 59.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 38895719 - NM_006386 DDX17 1 0.04 0.32 14 11.01 86.5 19 4.05 No 24 1.7 Yes 0 0 No -18 0.8 Yes 52 73.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38896006 - NM_006386 DDX17 1 0.06 0.36 14 7.84 93.23 28 5.63 Yes 15 0.55 No 0 0 No -27 0.87 Yes 43 90.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 38896969 - NM_006386 DDX17 1 0.11 0.76 33 10.08 85.96 28 8.31 Yes 15 0.97 Yes 0 0 No -27 0.86 Yes 43 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38901255 - NM_006386 DDX17 1 0.25 0.81 38 5.59 75.49 35 5.83 Yes 22 0.72 No 27 0.87 Yes -27 0.66 Yes 43 81.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 118574995 + NM_006773 DDX18 1 0.05 0.17 7 7.98 86.81 23 5.06 No 10 0.78 Yes 28 0.88 Yes -26 0.8 Yes 44 84.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 118579413 + NM_006773 DDX18 1 0.06 0.28 16 -4.01 0 15 4.36 No 72 1.26 Yes 26 0.65 Yes -14 0.7 Yes 56 73.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 118579443 + NM_006773 DDX18 1 0.08 0.31 20 -0.48 0 15 3.87 No 59 -4.07 No 0 0 No -32 0.87 Yes 38 80.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 118580328 + NM_006773 DDX18 1 3.23 14 72 -1.39 65.75 48 6.82 Yes 35 0.81 Yes 0 0 No -29 0.4 No 17 46.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 118582572 + NM_006773 DDX18 1 0.4 1.54 54 3.19 77.49 36 6.08 Yes 23 0.57 No 35 0.46 Yes -35 0.72 Yes 35 74.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 118582575 + NM_006773 DDX18 1 0.3 1.01 44 0.55 70.56 39 6.32 Yes 26 0.57 No 0 0 No -38 0.7 Yes 32 73.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 118583064 + NM_006773 DDX18 1 0.08 0.28 16 3.83 82.05 24 5.45 No 54 1.43 Yes 0 0 No -23 0.51 No 47 46.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 118586996 + NM_006773 DDX18 1 1.09 3.1 65 6.56 82.51 18 5.53 No 41 0.56 No 0 0 No -26 0.64 No 43 52.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 118586996 + NM_006773 DDX18 1 0.06 0.18 11 6.56 82.51 18 5.53 No 41 0.56 No 0 0 No -26 0.64 No 43 52.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 70383352 + NM_001320525 DDX19A 1 0.13 0.11 7 6.18 79.13 16 5.29 No 3 2.3 Yes 0 0 No -25 0.68 Yes 49 35.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 70399835 + NM_001320525 DDX19A 1 0.07 0.11 8 5.41 79.7 30 5.65 Yes 69 1.51 Yes 29 0.89 Yes -29 0.91 Yes 41 82.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70333774 + NM_007242 DDX19B 1 0.7 0.44 22 7.72 80.13 21 6.33 Yes 8 1.1 Yes 0 0 No -20 0.84 Yes 50 83.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70340834 + NM_007242 DDX19B 1 0.28 0.17 10 11.29 84.03 22 6.26 Yes 9 1.85 Yes 0 0 No -21 0.77 Yes 49 93.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70353503 + NM_007242 DDX19B 1 0.63 0.61 33 6.72 67.56 38 8.55 Yes 18 1.43 Yes 30 0.79 Yes -30 0.48 No 33 58.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 70363718 + NM_007242 DDX19B 1 0.52 0.31 15 2.44 73.46 20 7.41 Yes 71 -1.08 No 20 0.85 Yes -28 0.39 No 21 57.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 70365590 + NM_007242 DDX19B 1 0.46 0.15 10 13.09 97.24 30 5.74 Yes 76 2.1 Yes 26 0.82 Yes -29 0.72 Yes 41 83.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 112303099 + NM_007204 DDX20 1 0.13 0.15 10 0.89 0 33 6.6 Yes 20 0.17 No 0 0 No -38 0.48 No 32 63.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 112307023 + NM_007204 DDX20 1 0.34 0.42 24 7.7 88.07 41 4.85 No 24 0.01 No 0 0 No -28 0.56 No 42 78.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 70723104 + NM_001256910 DDX21 1 0.03 0.17 9 5.84 81.67 24 5.3 No 35 1.67 Yes 0 0 No -24 0.36 No 46 48.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 70730747 + NM_001256910 DDX21 1 0.07 0.39 23 2.52 0 38 7.07 Yes 25 1.78 Yes 0 0 No -37 0.91 Yes 33 94.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70738621 + NM_001256910 DDX21 1 0.04 0.17 10 7 80.16 27 4.61 No 40 0.66 No 0 0 No -26 0.33 No 17 34.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 70738876 + NM_001256910 DDX21 1 0.12 0.67 31 7.15 79.47 43 9.58 Yes 30 0.97 Yes 0 0 No -34 0.55 No 36 78.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 70738918 + NM_001256910 DDX21 1 0.02 0.17 8 5.55 84.2 26 7.13 Yes 13 1.17 Yes 0 0 No -25 0.84 Yes 45 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70742301 + NM_001256910 DDX21 1 0.07 0.49 26 -10.81 68.65 36 6.31 Yes 51 1.32 Yes 0 0 No -39 0.31 No 49 19.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49226326 - NM_004818 DDX23 1 0.15 0.29 19 5.37 74.04 20 4.61 No 37 1.22 Yes 0 0 No -19 0.84 Yes 51 84.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49226353 - NM_004818 DDX23 1 0.87 1.83 58 2.82 0 23 5.39 No 65 2.06 Yes 0 0 No -22 0.83 Yes 48 88.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49226380 - NM_004818 DDX23 1 0.12 0.26 17 7.07 80.2 37 6.35 Yes 38 2.05 Yes 18 0.82 Yes -36 0.61 No 46 76.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 49228998 - NM_004818 DDX23 1 0.12 0.28 18 5.41 80.25 27 5.2 No 55 1.16 Yes 26 0.82 Yes -53 0.74 Yes 17 67.25 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 49229774 - NM_004818 DDX23 1 0.08 0.17 10 5.19 74.95 39 6.22 Yes 54 0.47 No 0 0 No -35 0.56 No 31 51.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 49231438 - NM_004818 DDX23 1 0.15 0.22 14 0.75 67.96 29 5.31 No 26 0.51 No 0 0 No -27 0.86 Yes 43 96.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49233335 - NM_004818 DDX23 1 0.18 0.32 20 3.01 0 42 6.78 Yes 35 1.69 Yes 41 0.56 Yes -41 0.87 Yes 29 86.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49233935 - NM_004818 DDX23 1 0.47 0.79 37 3.6 80.77 51 7.16 Yes 62 0.15 No 18 0.67 Yes -18 0.51 No 20 77.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 49237832 - NM_004818 DDX23 1 0.05 0.11 7 -4.82 68.23 28 6.03 Yes 55 -4 No 0 0 No -27 0.54 No 43 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 94521546 - NM_020414 DDX24 1 0.03 0.14 8 5.81 82.74 18 5.55 No -3 0.96 Yes 24 0.76 Yes -24 0.58 No 46 88.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 94530248 - NM_020414 DDX24 1 0.07 0.21 14 9.99 87.15 30 6 Yes 54 0.11 No 0 0 No -30 0.62 No 41 50.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 94545968 - NM_020414 DDX24 1 0.59 1.18 45 6.9 77.44 19 5.46 No 6 0.25 No 25 0.66 Yes -18 0.76 Yes 52 57.09 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 47841311 + NM_017895 DDX27 1 0.16 0.29 16 8.4 81.03 21 5.2 No 16 0.5 No 28 0.78 Yes -28 0.71 Yes 42 70.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 47842951 + NM_017895 DDX27 1 0.04 0.1 7 5.2 76.79 33 6.13 Yes 20 1.08 Yes 21 0.98 Yes -32 0.56 No 38 83.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr20 47847559 + NM_017895 DDX27 1 7.16 10.57 72 8.89 82.45 38 6.07 Yes 74 2.15 Yes 30 0.94 Yes -30 0.95 Yes 40 96.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 47850071 + NM_017895 DDX27 1 0.4 0.63 25 7.98 83.71 34 6.32 Yes 21 0.58 No 26 0.86 Yes -33 0.61 No 37 69.17 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 47850134 + NM_017895 DDX27 1 0.07 0.13 7 8.62 79.06 28 5.66 Yes 15 0.11 No 0 0 No -23 0.55 No 47 78.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 47851305 + NM_017895 DDX27 1 0.1 0.18 12 7.41 92.87 22 5.1 No 71 1.27 Yes 0 0 No -21 0.96 Yes 49 97.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135471810 - NM_001322343 DDX31 1 0.39 0.29 16 11.33 86.14 88 8.32 Yes 51 1.67 Yes 0 0 No -26 0.34 No 44 51.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 135481895 - NM_001322343 DDX31 1 0.17 0.15 10 7.51 85.56 37 5.61 Yes 47 -1.8 No 0 0 No -25 0.56 No 45 77.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 135493805 - NM_001322343 DDX31 1 0.85 0.46 21 9.15 86.64 27 5.73 Yes 56 2.61 Yes 0 0 No -26 0.87 Yes 44 84.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135505237 - NM_001322343 DDX31 1 0.63 0.21 13 9.57 91 24 6.4 Yes 24 1.11 Yes 0 0 No -23 0.94 Yes 47 96.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135505766 - NM_001322343 DDX31 1 6.6 3.4 69 10.57 88.15 22 5.01 No 49 0.68 No 22 0.75 Yes -22 0.69 Yes 48 45.69 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 135526500 - NM_001322343 DDX31 1 0.43 0.28 17 0.41 0 24 6.94 Yes 67 0.61 No 0 0 No -24 0.65 No 37 71.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 135533746 - NM_001322343 DDX31 1 9.94 9.79 72 9.78 77.64 28 8.42 Yes 15 1.39 Yes 27 0.92 Yes -27 0.69 Yes 42 64.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 135536177 - NM_001322343 DDX31 1 0.38 0.28 16 8.27 87.33 28 6.78 Yes 15 0.35 No 0 0 No -27 0.82 Yes 43 84.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 135536563 - NM_001322343 DDX31 1 0.28 0.17 10 7.69 85.98 22 5.29 No -3 0.34 No 0 0 No -21 0.73 Yes 49 68.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 14519757 - NM_005804 DDX39A 1 0.07 0.32 18 -2.73 0 13 4.12 No 17 0.57 No 0 0 No -29 0.87 Yes 41 83.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 14520794 - NM_005804 DDX39A 1 0.62 2.43 63 -0.58 78.12 17 4.18 No 32 0.48 No 20 0.88 Yes -20 0.79 Yes 50 47.3 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 14520797 - NM_005804 DDX39A 1 0.34 1.33 46 0.72 0 14 3.9 No 29 0.48 No 20 0.88 Yes -17 0.75 Yes 53 55.26 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 14521418 - NM_005804 DDX39A 1 4.1 14.46 72 6.87 89.79 26 5.2 No 13 1.28 Yes 25 0.96 Yes -25 0.93 Yes 45 96.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 14521949 - NM_005804 DDX39A 1 0.76 1.46 55 1.11 72.29 41 6.71 Yes 34 0.48 No 38 0.09 Yes -40 0.64 No 30 71.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 14521952 - NM_005804 DDX39A 1 0.54 1.01 42 2.51 76.67 38 6.48 Yes 31 0.48 No 38 0.09 Yes -37 0.66 No 33 74.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 14523627 - NM_005804 DDX39A 1 0.14 0.61 32 -2.51 63.65 19 4.69 No 60 -3.09 No 18 0.92 Yes -18 0.86 Yes 52 77.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 14525747 - NM_005804 DDX39A 1 0.15 0.44 25 12.23 92.63 33 6.16 Yes 20 1.1 Yes 0 0 No -32 0.39 No 38 56.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 41196661 + NM_001193416 DDX3X 1 0.04 0.21 10 -9.49 0 22 6.62 Yes 9 2.38 Yes 0 0 No -21 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 41196943 + NM_001193416 DDX3X 1 1.24 6.36 71 6.44 90.92 28 5.29 No 49 1.07 Yes 27 0.83 Yes -21 0.57 No 13 67.64 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 41198276 + NM_001193416 DDX3X 1 0.08 0.42 24 -4.19 0 20 5.15 No 3 0.35 No 27 0.72 Yes -15 0.54 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 41198291 + NM_001193416 DDX3X 1 1.55 8.36 71 2.38 87.41 31 7.26 Yes 18 0.34 No 0 0 No -30 0.79 Yes 40 86.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 41199888 + NM_001193416 DDX3X 1 0.12 0.78 32 8.6 97.24 24 5.16 No 67 0.88 Yes 0 0 No -23 0.93 Yes 47 94.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 41201982 + NM_001193416 DDX3X 1 0.02 0.19 11 0.56 0 25 5.27 No 5 0.58 No 31 0.64 Yes -24 0.5 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 41204702 + NM_001193416 DDX3X 1 0.02 0.26 15 7.09 85.63 34 5.07 No 21 0.43 No 0 0 No -26 0.89 Yes 44 90.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 41205746 + NM_001193416 DDX3X 1 0.03 0.22 13 0.36 65.83 23 5.2 No 62 0.33 No 18 0.91 Yes -41 0.55 No 29 72.72 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 41205761 + NM_001193416 DDX3X 1 0.03 0.24 16 -3.14 0 23 4.2 No 44 0.27 No 0 0 No -22 0.97 Yes 48 96.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 41206183 + NM_001193416 DDX3X 1 0.03 0.19 11 2.79 80.02 28 5.74 Yes 47 0.62 No 0 0 No -27 0.57 No 42 64.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 41206564 + NM_001193416 DDX3X 1 246.78 396.36 72 5.75 85.86 16 5.98 Yes 3 0.17 No 30 0.75 Yes -30 0.55 No 50 49.25 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 41206570 + NM_001193416 DDX3X 1 0.33 0.54 31 -0.55 0 11 3.87 No 9 0.15 No 0 0 No -26 0.46 No 44 64.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 41207112 + NM_001193416 DDX3X 1 0.12 0.64 32 7.43 88.95 17 5.96 Yes 4 1.06 Yes 0 0 No -27 0.66 Yes 43 68.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 176939642 - NM_016222 DDX41 1 0.3 0.43 26 2.36 0 31 5.79 Yes 18 1.66 Yes 0 0 No -30 0.92 Yes 40 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176942341 - NM_016222 DDX41 1 0.4 0.83 37 5.27 79.95 31 5.34 No 18 1.3 Yes 18 0.25 Yes -30 0.49 No 52 37.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 176942363 - NM_016222 DDX41 1 0.22 0.49 26 0.77 0 9 3.87 No -4 0.6 No 28 0.53 Yes -58 0.49 No 15 62.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 176942369 - NM_016222 DDX41 1 0.07 0.17 12 2.7 74.91 50 7.35 Yes NA NA NA 28 0.53 Yes -22 0.5 No 21 61.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 176943518 - NM_016222 DDX41 1 1.18 1.61 55 0.7 70.81 13 3.54 No 41 -0.42 No 20 0.62 Yes -20 0.35 No 50 27.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 61852467 + NM_203499 DDX42 1 14.93 15.08 72 4.91 76.33 39 9.42 Yes 26 1.39 Yes 30 0.52 Yes -42 0.58 No 28 79.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 61875381 + NM_203499 DDX42 1 0.27 0.67 33 4.75 82.6 17 5.29 No 4 0.73 No 22 0.6 Yes -21 0.54 No 49 60.42 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 61876839 + NM_203499 DDX42 1 0.28 0.51 24 6.29 78.23 23 6.06 Yes 10 1.21 Yes 22 0.94 Yes -22 0.94 Yes 48 96.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 61881027 + NM_203499 DDX42 1 0.06 0.19 9 4.76 83 62 8.68 Yes 49 0.91 Yes 0 0 No -40 0.81 Yes 34 56.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 61882403 + NM_203499 DDX42 1 1.44 4.29 72 4.84 77.57 25 4.43 No 3 0.1 No 24 0.92 Yes -24 0.95 Yes 46 97.3 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 61885135 + NM_203499 DDX42 1 0.16 0.31 17 3.56 78.24 20 5.74 Yes 23 -3.04 No 0 0 No -19 0.49 No 48 64.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 61895059 + NM_203499 DDX42 1 0.07 0.19 13 2.58 0 9 3.87 No 13 1.83 Yes 0 0 No -36 0.57 No 34 55.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 134103820 + NM_001300860 DDX46 1 0.11 0.26 17 10.27 92.54 26 4.93 No 17 0.36 No 0 0 No -29 0.39 No 45 49.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 134106598 + NM_001300860 DDX46 1 0.11 0.21 13 1.24 0 16 3.38 No 27 1.49 Yes 0 0 No -39 0.82 Yes 31 92.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 134116825 + NM_001300860 DDX46 1 0.49 0.74 42 1.35 78.18 33 5.37 No 40 0.76 No 30 0.47 Yes -33 0.49 No 37 46.96 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 134120389 + NM_001300860 DDX46 1 0.23 0.35 19 4.75 85.42 65 7.94 Yes 3 1.14 Yes 0 0 No -38 0.67 Yes 32 61.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 134124901 + NM_001300860 DDX46 1 0.06 0.15 9 -5.09 72.24 31 6.71 Yes 10 1.14 Yes 26 0.81 Yes -30 0.43 No 40 71.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 134124905 + NM_001300860 DDX46 1 0.46 0.97 42 -3.85 0 35 6.87 Yes 14 1.14 Yes 26 0.81 Yes -34 0.37 No 36 71.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 134125795 + NM_001300860 DDX46 1 0.69 1.53 52 10.8 90.97 17 7.17 Yes 4 1.3 Yes 24 0.81 Yes -24 0.78 Yes 46 73.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 134146935 + NM_001300860 DDX46 1 0.13 0.22 10 5.06 89.23 16 4.86 No 41 0.7 No 0 0 No -27 0.48 No 49 51.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 134147388 + NM_001300860 DDX46 1 0.24 0.44 25 -14.58 76.99 27 6.24 Yes 14 1.4 Yes 0 0 No -26 0.89 Yes 44 86.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 12970652 + NM_016355 DDX47 1 0.1 0.24 11 8.75 95.68 26 5.32 No 42 0.18 No 0 0 No -34 0.59 No 45 60.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 12974555 + NM_016355 DDX47 1 0.04 0.14 8 -2.14 53.47 24 5.48 No 69 -6.06 No 0 0 No -57 0.59 No 13 25.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 12976865 + NM_016355 DDX47 1 0.17 0.38 20 7.19 78.88 69 7.9 Yes 56 0.74 No 0 0 No -24 0.47 No 46 52.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 12977437 + NM_016355 DDX47 1 0.06 0.17 8 4.7 66.92 63 7.11 Yes 50 0.31 No 0 0 No -54 0.84 Yes 16 86.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 12980155 + NM_016355 DDX47 1 0.05 0.15 9 -5.11 0 14 4.12 No 39 -3.83 No 0 0 No -13 0.47 No 57 59.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 12980165 + NM_016355 DDX47 1 0.13 0.33 18 -12.49 0 16 4.12 No 49 -4.46 No 0 0 No -38 0.43 No 55 28.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19031459 + NM_019070 DDX49 1 6.17 6.86 72 10.26 87.31 10 5.66 Yes 35 -0.23 No 25 0.8 Yes -25 0.79 Yes 45 89.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19031642 + NM_019070 DDX49 1 2.8 3.65 69 6.94 78.51 25 4.59 No 44 1.37 Yes 30 0.47 Yes -27 0.65 No 43 71.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 19035023 + NM_019070 DDX49 1 0.11 0.22 14 -6.37 0 13 4.32 No 68 -2.7 No 22 0.96 Yes -20 0.61 No 58 42.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 19035661 + NM_019070 DDX49 1 0.09 0.19 14 3.15 66.57 32 6.16 Yes 29 1.02 Yes 31 0.59 Yes -31 0.82 Yes 39 80.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19035938 + NM_019070 DDX49 1 0.52 1.06 38 1.51 77.47 11 3.55 No 75 -4.57 No 26 0.53 Yes -26 0.8 Yes 44 79.74 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62498667 - NM_001320595 DDX5 1 0.02 0.22 12 -10.64 0 39 4.83 No 71 0.6 No 0 0 No -32 0.87 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 62499419 - NM_001320595 DDX5 1 0.13 1.15 50 4.4 75.02 14 5.1 No 1 1.31 Yes 22 0.53 Yes -29 0.37 No 50 53.4 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 62499491 - NM_001320595 DDX5 1 0.01 0.13 8 -4.4 0 12 4.24 No 38 0.22 No 22 0.78 Yes -50 0.37 No 51 45.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 62499651 - NM_001320595 DDX5 1 0.02 0.22 12 4.89 75.2 42 5.52 No 49 1.1 Yes 0 0 No -21 0.54 No 49 33.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 62499984 - NM_001320595 DDX5 1 0.03 0.4 21 -8.75 0 42 6.49 Yes 29 0.83 Yes 25 0.91 Yes -41 0.39 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 62499986 - NM_001320595 DDX5 1 0.01 0.11 8 -14.65 0 40 6.37 Yes 27 0.83 Yes 25 0.91 Yes -39 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 62500206 - NM_001320595 DDX5 1 0.01 0.19 12 -1.97 0 37 6.16 Yes 48 1.24 Yes 0 0 No -36 0.63 No 34 65.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 62500433 - NM_001320595 DDX5 1 0.15 2.56 63 -6.23 0 36 4.52 No 5 0.22 No 28 0.38 Yes -28 0.78 Yes 42 77.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62502378 - NM_001320595 DDX5 1 18 1.19 49 2.25 69.39 26 6.85 Yes 13 0.72 No 22 0.85 Yes -25 0.86 Yes 45 85.62 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 70661806 + NM_024045 DDX50 1 0.72 0.83 35 10.46 85.11 29 5.34 No 25 0.56 No 0 0 No -28 0.68 Yes 48 59.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 70662444 + NM_024045 DDX50 1 0.09 0.11 7 0.23 72.13 75 9.99 Yes 62 1.84 Yes 0 0 No -30 0.38 No 28 30.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 70665981 + NM_024045 DDX50 1 3.1 3.38 66 7.42 90.36 25 4.77 No 61 0.03 No 24 0.69 Yes -24 0.55 No 46 78.25 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 70666039 + NM_024045 DDX50 1 1.24 1.38 53 9.59 86.86 31 4.98 No 48 -2.67 No 23 0.44 Yes -23 0.59 No 51 62.03 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 70667666 + NM_024045 DDX50 1 0.47 0.58 28 4.93 80.7 22 5.07 No 9 0.83 Yes 0 0 No -21 0.81 Yes 49 91.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70670856 + NM_024045 DDX50 1 0.78 1.01 40 6.28 77.52 23 6 Yes 10 1.25 Yes 0 0 No -22 0.81 Yes 48 79.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70696741 + NM_024045 DDX50 1 0.22 0.33 16 4.8 79.11 31 7.66 Yes 18 1.22 Yes 0 0 No -30 0.98 Yes 40 97.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70697048 + NM_024045 DDX50 1 0.08 0.14 7 6.38 80.92 50 9.01 Yes 37 1.06 Yes 0 0 No -34 0.84 Yes 36 84.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70706111 + NM_024045 DDX50 1 0.13 0.19 12 -1.91 0 65 9.1 Yes -4 1.06 Yes 0 0 No -26 0.82 Yes 44 53.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 132623760 - NM_175066 DDX51 1 0.27 0.14 9 10.21 83.53 14 5.33 No 1 2.45 Yes 0 0 No -22 0.92 Yes 48 94.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132624264 - NM_175066 DDX51 1 0.28 0.13 7 -1.37 0 9 3.87 No 52 0.48 No 0 0 No -27 0.9 Yes 43 75.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 132625101 - NM_175066 DDX51 1 3.04 0.81 34 2.71 77.94 13 5 No 49 -1.85 No 28 0.42 Yes -18 0.52 No 52 74.01 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 132625453 - NM_175066 DDX51 1 0.49 0.17 10 11.46 93.95 25 5.27 No 59 -2.14 No 0 0 No -21 0.61 No 50 71.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 132626550 - NM_175066 DDX51 1 0.86 0.31 21 5.48 89.12 26 5.58 Yes 61 0.95 Yes 0 0 No -23 0.85 Yes 47 82.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132626863 - NM_175066 DDX51 1 2.12 0.74 35 9.69 89.7 25 5.91 Yes NA NA NA 0 0 No -24 0.51 No 42 56.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 132628128 - NM_175066 DDX51 1 1.42 0.26 15 3.49 76.65 23 5.36 No 66 -2.83 No 0 0 No -22 0.91 Yes 48 78.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 35981533 - NM_001291476 DDX52 1 0.11 0.15 11 8.54 91.54 28 6.04 Yes 73 0.91 Yes 0 0 No -27 0.71 Yes 43 58.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 35983700 - NM_001291476 DDX52 1 0.12 0.14 10 2.96 77.33 16 5.85 Yes -2 0.39 No 0 0 No -19 0.42 No 37 52.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 35986905 - NM_001291476 DDX52 1 0.11 0.15 9 -11.97 0 44 7.14 Yes 52 0.59 No 0 0 No -29 0.63 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 35989994 - NM_001291476 DDX52 1 0.13 0.15 7 8.55 88 18 5.08 No 5 1.09 Yes 0 0 No -26 0.83 Yes 49 80.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113599181 - NM_024072 DDX54 1 0.12 0.18 12 -4.25 0 10 4 No 9 0.88 Yes 0 0 No -21 0.65 No 48 70.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 113599827 - NM_024072 DDX54 1 0.07 0.1 7 4.57 79.03 21 5.08 No 75 -5.01 No 26 0.67 Yes -21 0.68 Yes 49 64.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 113603550 - NM_024072 DDX54 1 0.09 0.11 7 7.31 72.23 14 5.92 Yes 1 2.3 Yes 23 0.94 Yes -28 0.58 No 42 57.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 113616828 - NM_024072 DDX54 1 0.51 0.79 36 3.17 0 20 6.6 Yes 27 1.98 Yes 0 0 No -23 0.55 No 31 67.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 124088394 + NR_135104 DDX55 1 2.24 0.51 27 6.36 90.11 27 5.74 Yes 23 0.95 Yes 0 0 No -26 0.77 Yes 44 64.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 124090411 + NR_135104 DDX55 1 3.46 0.76 35 7.37 81.4 27 5.29 No 14 1.2 Yes 26 0.78 Yes -26 0.83 Yes 44 87.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124090626 + NR_135104 DDX55 1 1.47 0.64 28 0.54 0 11 4 No 37 -1.56 No 0 0 No -25 0.27 No 45 33.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 124092128 + NR_135104 DDX55 1 0.5 0.28 15 1.85 65.9 30 6.32 Yes 17 0.11 No 25 0.9 Yes -29 0.94 Yes 41 91.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124092150 + NR_135104 DDX55 1 1.22 0.65 35 2.54 0 30 5.37 No 39 0.12 No 25 0.9 Yes -30 0.38 No 40 61.13 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 124094549 + NR_135104 DDX55 1 5.18 3.63 69 6.87 83.91 14 5.27 No 69 0.66 No 25 0.6 Yes -22 0.5 No 48 59.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 124103994 + NR_135104 DDX55 1 0.31 0.29 12 1.24 83.01 23 4.96 No 28 2.38 Yes 24 0.96 Yes -22 0.65 No 48 62.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 124102022 + NR_135104 DDX55 1 0.78 0.42 22 8.54 88.71 40 4.92 No 39 0.72 No 0 0 No -33 0.72 Yes 37 78.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124103994 + NR_135104 DDX55 1 1.75 1.29 49 1.24 83.01 23 4.96 No 28 2.38 Yes 24 0.96 Yes -22 0.65 No 48 62.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 124103994 + NR_135104 DDX55 1 11.88 8.51 72 1.24 83.01 23 4.96 No 28 2.38 Yes 24 0.96 Yes -22 0.65 No 48 62.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44605677 - NM_001257189 DDX56 1 0.1 0.19 13 -7.03 77.47 25 8.99 Yes 12 1.6 Yes 0 0 No -24 0.84 Yes 46 93.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44608605 - NM_001257189 DDX56 1 0.59 1.44 47 8.73 82.57 18 5.48 No 5 1.54 Yes 23 0.66 Yes -17 0.67 Yes 53 79.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44608918 - NM_001257189 DDX56 1 0.18 0.26 13 4.1 81.18 23 5.83 Yes 10 0.3 No 0 0 No -22 0.87 Yes 48 72.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44611354 - NM_001257189 DDX56 1 0.3 0.56 28 10.27 91.44 43 6.97 Yes 30 0.38 No 25 0.98 Yes -31 0.6 No 39 69.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 44611486 - NM_001257189 DDX56 1 0.23 0.39 20 5.25 81.54 21 5.13 No 49 -5.16 No 0 0 No -20 0.44 No 46 42.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44612596 - NM_001257189 DDX56 1 0.36 0.46 25 5.97 81.89 28 5.66 Yes 67 0.86 Yes 0 0 No -27 0.87 Yes 43 81.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44612646 - NM_001257189 DDX56 1 0.09 0.13 7 2.73 0 30 5.82 Yes 17 0.89 Yes 25 0.91 Yes -29 0.68 Yes 41 82.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44613077 - NM_001257189 DDX56 1 0.09 0.13 7 7.03 86.26 31 6.08 Yes 18 0.79 Yes 0 0 No -30 0.9 Yes 40 87.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 32482849 - NM_014314 DDX58 1 0.36 0.13 8 8.24 85.05 32 5.41 No 19 1.53 Yes 0 0 No -31 0.69 Yes 39 76.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 32488196 - NM_014314 DDX58 1 0.34 0.19 13 -0.39 0 16 3.87 No 66 1.15 Yes 0 0 No -32 0.58 No 39 76.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 32489447 - NM_014314 DDX58 1 1.42 1.07 44 0.91 72.36 27 6.93 Yes 14 1.06 Yes 0 0 No -26 0.86 Yes 44 83.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 32492478 - NM_014314 DDX58 1 0.75 0.14 7 4.31 77.06 29 5.66 Yes 68 0.36 No 0 0 No -27 0.38 No 45 42.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 32492522 - NM_014314 DDX58 1 1.59 0.76 31 1.98 81.21 18 4.9 No 24 0.38 No 0 0 No -17 0.27 No 40 45.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 32492550 - NM_014314 DDX58 1 0.34 0.15 9 0.93 70.84 20 4.74 No 51 1.63 Yes 21 0.47 Yes -24 0.41 No 51 45 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 32498565 - NM_014314 DDX58 1 0.75 0.35 20 11.09 92.71 23 7.59 Yes 10 0.26 No 27 0.55 Yes -25 0.82 Yes 45 88.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 32500935 - NM_014314 DDX58 1 0.31 0.14 8 0.23 74.83 31 4.96 No 64 1.34 Yes 0 0 No -30 0.59 No 40 66.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 200619714 - NM_001031725 DDX59 1 0.44 0.25 12 4.43 86.1 25 5 No 15 0.71 No 0 0 No -27 0.59 No 43 85.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 200619730 - NM_001031725 DDX59 1 1.28 0.69 32 3.35 73.64 33 6.81 Yes -1 0.43 No 0 0 No -32 0.72 Yes 38 82.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 200627039 - NM_001031725 DDX59 1 0.21 0.1 7 2.71 0 35 6.59 Yes 22 0.38 No 0 0 No -28 0.65 No 42 56.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118627991 - NM_004397 DDX6 1 0.04 0.31 19 3.56 0 9 3.87 No 18 1.3 Yes 0 0 No -30 0.95 Yes 40 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118630757 - NM_004397 DDX6 1 0.03 0.17 10 1.31 0 23 6.61 Yes 69 0.88 Yes 25 0.58 Yes -32 0.54 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 118631530 - NM_004397 DDX6 1 0.09 0.56 33 3.97 84.41 27 6.42 Yes 14 1.45 Yes 0 0 No -26 0.89 Yes 44 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118636005 - NM_004397 DDX6 1 0.06 0.25 12 5.96 81.36 15 4.53 No 39 0.9 Yes 0 0 No -23 0.79 Yes 47 85.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118636026 - NM_004397 DDX6 1 0.04 0.17 10 3.65 88.18 22 4.79 No 65 1.52 Yes 0 0 No -21 0.45 No 49 63.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 118636070 - NM_004397 DDX6 1 0.07 0.32 19 -2.73 0 34 7.42 Yes 21 1.56 Yes 24 0.81 Yes -33 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 169138832 - NM_017631 DDX60 1 3.67 1.51 44 10.09 94.02 48 6.06 Yes 19 2.29 Yes 0 0 No -31 0.86 Yes 39 89.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 169138946 - NM_017631 DDX60 1 0.51 0.22 15 8.11 80.86 39 5.78 Yes 9 -0.55 No 0 0 No -34 0.45 No 43 37.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 169158487 - NM_017631 DDX60 1 0.82 0.42 21 6.86 88.21 17 8.91 Yes 4 1.58 Yes 0 0 No -31 0.4 No 42 37.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 169186766 - NM_017631 DDX60 1 0.37 0.15 10 8.23 87.12 23 5.13 No 29 0.98 Yes 23 0.77 Yes -22 0.52 No 47 68.78 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 169201739 - NM_017631 DDX60 1 0.24 0.15 9 -14.79 63.71 29 4.93 No 50 1.28 Yes 0 0 No -29 0.87 Yes 41 91.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 169225846 - NM_017631 DDX60 1 0.18 0.11 7 1.35 0 48 7.73 Yes 73 -1.81 No 0 0 No -35 0.47 No 33 45.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 169232215 - NM_017631 DDX60 1 0.44 0.15 10 -3.01 0 40 7.99 Yes 27 1.87 Yes 0 0 No -39 0.6 No 31 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 169239401 - NM_017631 DDX60 1 1.81 0.43 25 -0.79 71.13 22 5.66 Yes 49 -4.26 No 0 0 No -21 0.45 No 48 34.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 169239404 - NM_017631 DDX60 1 2.59 0.61 30 2.1 76.07 19 5.39 No 74 -5.74 No 0 0 No -18 0.26 No 48 40.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 169298995 - NM_001345927 DDX60L 1 11.33 1.29 45 5.31 83.92 36 7.22 Yes 23 1.66 Yes 35 0.48 Yes -35 0.85 Yes 35 89.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 169391989 - NM_001345927 DDX60L 1 9.61 1.67 58 12.44 88.27 17 5.57 Yes 49 0.52 No 24 0.72 Yes -22 0.51 No 48 65.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 646556 - NM_021008 DEAF1 1 3.36 2.38 56 8.85 85.98 32 6.99 Yes 19 1.75 Yes 0 0 No -31 0.89 Yes 39 90.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 651408 - NM_021008 DEAF1 1 1.3 0.89 42 11.48 95.65 25 6.98 Yes 32 1.13 Yes 24 0.72 Yes -25 0.42 No 45 62.08 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 651947 - NM_021008 DEAF1 1 0.82 0.58 30 6.97 75.88 32 6.59 Yes 23 1.89 Yes 0 0 No -35 0.89 Yes 35 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 653385 - NM_021008 DEAF1 1 0.62 0.42 18 6.64 80.18 21 4.9 No 8 0.71 No 0 0 No -20 0.58 No 46 56.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 653445 - NM_021008 DEAF1 1 0.25 0.18 10 6.64 80.18 21 4.9 No 8 0.71 No 0 0 No -20 0.62 No 46 54.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 653505 - NM_021008 DEAF1 1 0.72 0.51 23 6.64 80.18 21 4.9 No 8 0.71 No 0 0 No -20 0.59 No 46 52.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 653565 - NM_021008 DEAF1 1 0.42 0.28 10 6.64 80.18 25 3.94 No 68 0.69 No 0 0 No -20 0.69 Yes 50 67.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 653625 - NM_021008 DEAF1 1 0.4 0.25 13 6.64 80.18 21 4.76 No 8 0.71 No 0 0 No -24 0.62 No 46 63.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 654049 - NM_021008 DEAF1 1 0.78 0.4 22 5.2 83.48 30 7.86 Yes 17 1.98 Yes 0 0 No -29 0.89 Yes 41 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 654705 - NM_021008 DEAF1 1 0.17 0.1 7 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -25 0.43 No 45 73.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 659797 - NM_021008 DEAF1 1 4.36 1.99 60 10.92 89.15 31 8.06 Yes 18 2.05 Yes 0 0 No -30 0.97 Yes 40 96.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 660774 - NM_021008 DEAF1 1 0.41 0.18 10 8.32 85.46 28 5 No 54 1.24 Yes 0 0 No -27 0.55 No 38 45.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 675817 - NM_021008 DEAF1 1 0.18 0.13 9 5.11 83.57 29 5.74 Yes 65 0.72 No 0 0 No -28 0.76 Yes 42 82.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 680075 - NM_021008 DEAF1 1 2.25 1.58 55 5.16 76.69 37 5.88 Yes 24 1.2 Yes 28 0.75 Yes -36 0.61 No 30 69.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 688050 - NM_021008 DEAF1 1 0.18 0.11 8 -1.23 0 12 3.98 No 22 1.33 Yes 0 0 No -34 0.94 Yes 36 96.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 689814 - NM_021008 DEAF1 1 1.54 1.01 40 10.01 94.98 23 5.39 No 10 0.93 Yes 22 0.89 Yes -22 0.86 Yes 48 87.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 91031140 + NM_001330575 DECR1 1 0.28 0.58 23 -2.68 0 26 5.2 No 70 0.08 No 0 0 No -25 0.63 No 45 87.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 91031043 + NM_001330575 DECR1 1 0.13 0.28 17 6.34 86.59 19 6.3 Yes 6 0.97 Yes 18 0.37 Yes -35 0.48 No 35 37.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 91031140 + NM_001330575 DECR1 1 0.13 0.32 17 -2.68 0 26 5.2 No 70 0.08 No 0 0 No -25 0.63 No 45 87.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 91041511 + NM_001330575 DECR1 1 0.09 0.22 13 7.44 82.79 26 5.55 No 66 0.18 No 25 0.86 Yes -25 0.96 Yes 45 96.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 91042625 + NM_001330575 DECR1 1 0.12 0.26 17 7.37 89.93 49 5.11 No 36 0.91 Yes 0 0 No -32 0.48 No 38 56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 91042723 + NM_001330575 DECR1 1 0.78 1.88 55 6 89.58 30 8.82 Yes 17 0.52 No 0 0 No -29 0.67 Yes 41 76.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 91054966 + NM_001330575 DECR1 1 0.35 0.85 39 4.69 0 20 4.47 No 13 0.73 No 0 0 No -19 0.67 Yes 51 42.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 91054966 + NM_001330575 DECR1 1 0.04 0.11 7 4.69 0 20 4.47 No 13 0.73 No 0 0 No -19 0.67 Yes 51 42.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 91057259 + NM_001330575 DECR1 1 0.12 0.33 20 10.7 95.91 14 5.21 No 21 1.24 Yes 33 0.73 Yes -23 0.7 Yes 47 79.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 91058368 + NM_001330575 DECR1 1 0.05 0.17 10 8.46 81.56 24 5.29 No 17 0.48 No 0 0 No -23 0.89 Yes 47 83.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 455512 + NM_020664 DECR2 1 1.01 0.11 7 7 83.26 21 6.48 Yes 66 0.97 Yes 20 0.47 Yes -20 0.56 No 39 53.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 456684 + NM_020664 DECR2 1 3.28 0.49 23 4.84 84.03 22 7.28 Yes 9 1.22 Yes 0 0 No -21 0.91 Yes 49 94.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 456735 + NM_020664 DECR2 1 3.63 0.44 22 6.4 84.82 31 5.83 Yes 60 1.21 Yes 0 0 No -30 0.94 Yes 40 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 460208 + NM_020664 DECR2 1 2.53 0.26 17 8.54 87.67 22 8.7 Yes NA NA NA 25 0.43 Yes -27 0.48 No 49 67.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 161092965 - NM_001039711 DEDD 1 0.1 0.11 7 7.25 79.76 50 7.37 Yes 73 0.9 Yes 35 0.13 Yes -35 0.64 No 35 80.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 161093719 - NM_001039711 DEDD 1 0.69 0.4 22 7.63 78.23 23 5.19 No 29 0.99 Yes 0 0 No -20 0.63 No 50 77.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 42706225 - NM_133328 DEDD2 1 5.33 1.99 58 11.31 89.62 33 5.91 Yes 45 0.72 No 31 0.53 Yes -31 0.82 Yes 42 80.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42708712 - NM_133328 DEDD2 1 1.87 0.71 31 6.94 85.3 22 4.55 No 0 0.48 No 21 0.72 Yes -21 0.91 Yes 49 88.3 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 35278223 + NM_022047 DEF6 1 0.16 0.18 9 -0.01 0 14 4.46 No -4 0.2 No 20 0.89 Yes -17 0.87 Yes 53 73.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 35278301 + NM_022047 DEF6 1 0.15 0.19 10 -6.83 54.66 33 5.88 Yes 0 1.24 Yes 0 0 No -12 0.38 No 41 34.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 35278346 + NM_022047 DEF6 1 3.66 4.07 68 7.7 85.4 13 5 No 62 -3.38 No 21 0.69 Yes -27 0.69 Yes 49 36.61 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 35279990 + NM_022047 DEF6 1 2.07 1.36 52 8.25 88.78 32 8.27 Yes 19 1.54 Yes 0 0 No -31 0.88 Yes 39 87.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35285712 + NM_022047 DEF6 1 0.81 0.67 27 2.52 76.68 30 5.48 No 69 -0.68 No 0 0 No -25 0.54 No 45 21.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 90020696 + NM_001242819 DEF8 1 2.13 0.54 29 6.22 87.52 27 4.99 No 58 1.15 Yes 23 0.61 Yes -21 0.55 No 44 48.58 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 90023880 + NM_001242819 DEF8 1 1.16 1.03 50 -1.4 0 18 4.23 No 70 0.3 No 18 0.93 Yes -17 0.88 Yes 53 74.35 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 90023948 + NM_001242819 DEF8 1 0.57 0.51 24 3.77 72.82 12 6.24 Yes 44 1.29 Yes 29 0.49 Yes -22 0.49 No 14 43.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 90024409 + NM_001242819 DEF8 1 0.1 0.1 7 7.68 79.41 46 6.14 Yes 54 0.28 No 26 0.85 Yes -26 0.62 No 44 78.09 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 90028157 + NM_001242819 DEF8 1 0.68 0.25 14 -0.64 61.44 23 4.69 No 10 0.57 No 0 0 No -34 0.74 Yes 36 73.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 90028475 + NM_001242819 DEF8 1 0.43 0.14 10 5.47 75.07 24 7.14 Yes 11 1.18 Yes 0 0 No -23 0.88 Yes 47 81.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 90029773 + NM_001242819 DEF8 1 0.44 0.15 9 0.49 72.1 36 6.24 Yes 23 0.31 No 0 0 No -35 0.66 No 35 57.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 90030577 + NM_001242819 DEF8 1 204.9 14.49 72 2.36 70.31 22 6 Yes 66 -3.04 No 21 0.89 Yes -21 0.93 Yes 49 87.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 90030583 + NM_001242819 DEF8 1 6.79 0.56 33 -3.13 0 16 3.87 No 72 -3.42 No 0 0 No -27 0.83 Yes 43 80.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224378793 + NM_001321542 DEGS1 1 1.89 4.46 71 6 76.82 73 8.69 Yes 60 1.05 Yes 21 0.76 Yes -21 0.62 No 49 53.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 18236766 - NM_001134709 DEK 1 0.02 0.11 7 0.25 74.5 17 4.69 No 56 -5.87 No 0 0 No -24 0.52 No 46 30.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 18236828 - NM_001134709 DEK 1 0.1 0.69 32 -4.29 0 27 4.24 No 53 0.77 Yes 0 0 No -26 0.34 No 44 40.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 18236831 - NM_001134709 DEK 1 0.01 0.13 7 -13.23 0 24 4.08 No 50 0.78 Yes 0 0 No -23 0.36 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 18244835 - NM_001134709 DEK 1 0.82 4.14 71 5.15 79.95 30 6.4 Yes 17 1.24 Yes 29 0.87 Yes -29 0.67 Yes 41 83.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 18256082 - NM_001134709 DEK 1 0.05 0.28 17 -8.89 0 33 7.35 Yes 20 1.7 Yes 0 0 No -32 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 18256672 - NM_001134709 DEK 1 0.09 0.32 19 1.25 77.19 18 4.9 No 64 0.17 No 20 0.71 Yes -17 0.19 No 35 41.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 18256699 - NM_001134709 DEK 1 0.13 0.49 26 1.2 65.32 67 8.85 Yes 54 0.18 No 20 0.71 Yes -19 0.26 No 62 16.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 126174109 - NM_020946 DENND1A 1 0.95 0.75 34 4.36 78.59 20 5.1 No 15 1.05 Yes 27 0.68 Yes -27 0.84 Yes 43 62.35 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 126202469 - NM_020946 DENND1A 1 1.75 1.5 55 4.39 83.83 32 5.26 No 19 0.29 No 24 0.81 Yes -24 0.59 No 46 55.03 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 126203960 - NM_020946 DENND1A 1 0.16 0.17 11 7.09 79.53 52 6.33 Yes 66 0.86 Yes 0 0 No -36 0.75 Yes 34 83.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 126213124 - NM_020946 DENND1A 1 0.19 0.21 14 9.53 81.43 27 5.7 Yes 65 1.4 Yes 0 0 No -29 0.54 No 41 62.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 126214623 - NM_020946 DENND1A 1 0.53 0.46 25 -2.37 0 24 5.29 No 11 1.18 Yes 0 0 No -23 0.85 Yes 47 90.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 126215188 - NM_020946 DENND1A 1 0.43 0.38 18 8.57 82.44 20 6.3 Yes 7 0.75 No 0 0 No -23 0.51 No 47 56.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 126215600 - NM_020946 DENND1A 1 0.7 0.63 26 5.83 79.77 28 5.61 Yes 4 -1.62 No 0 0 No -30 0.73 Yes 40 78.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 126327928 - NM_020946 DENND1A 1 0.69 0.76 36 10.13 86.76 21 5.83 Yes 8 1.92 Yes 0 0 No -20 0.69 Yes 50 84.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 126331871 - NM_020946 DENND1A 1 0.18 0.19 10 -6.16 0 28 9.44 Yes 15 0.7 No 0 0 No -27 0.69 Yes 43 82.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 126331875 - NM_020946 DENND1A 1 5.75 6.43 72 7.81 94.22 24 9.23 Yes 11 0.73 No 23 0.71 Yes -23 0.69 Yes 47 84.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 126385381 - NM_020946 DENND1A 1 0.12 0.15 11 10.5 91.28 35 5.86 Yes 55 1.07 Yes 0 0 No -25 0.54 No 45 55.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 126395171 - NM_020946 DENND1A 1 0.09 0.14 8 5.86 79.44 31 3.84 No 9 0.5 No 0 0 No -27 0.39 No 43 39.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 126413179 - NM_020946 DENND1A 1 0.24 0.33 19 3.01 0 40 7.55 Yes 27 1.77 Yes 0 0 No -39 0.89 Yes 31 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 126414401 - NM_020946 DENND1A 1 1.13 1.25 46 0.05 81.22 35 6.15 Yes 64 0.64 No 0 0 No -28 0.52 No 44 52.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 126425230 - NM_020946 DENND1A 1 0.3 0.28 16 12.45 95.02 25 6.34 Yes 12 1.49 Yes 0 0 No -24 0.32 No 46 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 126429568 - NM_020946 DENND1A 1 0.13 0.22 14 3.52 80.69 21 4.8 No 30 1.38 Yes 0 0 No -20 0.78 Yes 50 72.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 126452625 - NM_020946 DENND1A 1 0.12 0.22 13 8.1 80.37 31 5.87 Yes 18 0.37 No 0 0 No -31 0.69 Yes 39 80.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 126502188 - NM_020946 DENND1A 1 0.73 1.35 47 7.95 83.96 40 4.43 No 57 1.77 Yes 0 0 No -37 0.81 Yes 33 83.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 126512591 - NM_020946 DENND1A 1 0.09 0.15 8 8.21 86.7 40 6.71 Yes 52 0.72 No 0 0 No -19 0.67 Yes 51 50.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 126520094 - NM_020946 DENND1A 1 0.08 0.15 8 0.07 0 12 3.1 No 37 0.89 Yes 0 0 No -49 0.57 No 21 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 126571501 - NM_020946 DENND1A 1 0.37 0.5 26 6.76 79.52 13 4.98 No 0 1.07 Yes 0 0 No -21 0.7 Yes 49 73.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 126596308 - NM_020946 DENND1A 1 0.14 0.18 8 5.3 91.35 26 5.1 No 28 0.34 No 0 0 No -25 0.79 Yes 45 81.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 126637594 - NM_020946 DENND1A 1 0.25 0.33 19 4.87 81.14 20 5.1 No 19 0.27 No 0 0 No -19 0.75 Yes 51 85.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 126641297 - NM_020946 DENND1A 1 0.38 0.28 18 2.31 0 28 5.76 Yes 29 0.77 Yes 0 0 No -27 0.48 No 46 61.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 126679456 - NM_020946 DENND1A 1 0.16 0.13 7 3.58 0 40 6.77 Yes 38 0.23 No 0 0 No -39 0.48 No 31 63.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 126685695 - NM_020946 DENND1A 1 0.27 0.19 12 9.61 84.78 35 7.55 Yes 22 2.27 Yes 0 0 No -34 0.88 Yes 36 89.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 126691013 - NM_020946 DENND1A 1 0.47 0.28 16 7.3 85.8 33 6.82 Yes -4 0.3 No 0 0 No -32 0.65 No 38 72.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 6468158 - NM_024898 DENND1C 1 0.15 0.18 12 3.87 66.04 29 5.29 No 28 1.15 Yes 32 0.8 Yes -40 0.35 No 30 53.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 6468339 - NM_024898 DENND1C 1 0.2 0.19 14 -2.13 0 18 4.47 No 76 -4.35 No 0 0 No -17 0.87 Yes 53 68.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 6468717 - NM_024898 DENND1C 1 0.34 0.5 20 6.1 82.99 13 6.66 Yes 0 1.93 Yes 0 0 No -18 0.68 Yes 52 79.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6475655 - NM_024898 DENND1C 1 3.49 4.31 72 9.96 83.62 29 5.92 Yes 47 -1.34 No 28 0.78 Yes -28 0.86 Yes 42 81.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 6475727 - NM_024898 DENND1C 1 0.4 0.54 23 -3.36 0 18 4.36 No 46 1.41 Yes 0 0 No -17 0.53 No 53 59.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 6476087 - NM_024898 DENND1C 1 0.12 0.11 8 3.45 78.1 38 6.11 Yes 56 0.21 No 30 0.29 Yes -38 0.28 No 37 43.24 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 6476977 - NM_024898 DENND1C 1 0.75 0.75 35 -3.39 79.42 19 5.34 No -2 0.6 No 22 0.67 Yes -22 0.41 No 48 43.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 6477290 - NM_024898 DENND1C 1 0.83 0.81 33 3.34 0 32 5.57 Yes 19 0.47 No 26 0.75 Yes -26 0.62 No 39 69.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 6477314 - NM_024898 DENND1C 1 0.24 0.24 17 2.94 74.51 11 4.08 No 60 0.16 No 26 0.75 Yes -17 0.26 No 53 48.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 6477428 - NM_024898 DENND1C 1 0.23 0.21 13 3.46 81.47 18 5.96 Yes 61 1.12 Yes 0 0 No -21 0.59 No 53 34.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 6477431 - NM_024898 DENND1C 1 0.31 0.35 19 5.94 72.45 15 5.71 Yes 58 1.11 Yes 0 0 No -18 0.42 No 42 26.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 6479021 - NM_024898 DENND1C 1 0.51 0.51 29 10.71 84.47 17 5.57 Yes 54 1.67 Yes 0 0 No -24 0.8 Yes 46 69.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 6479083 - NM_024898 DENND1C 1 0.23 0.26 17 7.46 80.21 16 4.69 No 20 -1.51 No 32 0.54 Yes -21 0.58 No 49 61.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 6480025 - NM_024898 DENND1C 1 3.9 1.71 51 3.53 76.87 16 5.82 Yes 3 0.49 No 26 0.53 Yes -29 0.63 No 48 49.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 6480123 - NM_024898 DENND1C 1 1.05 0.49 24 0.74 65.91 59 7.82 Yes 68 -2.75 No 0 0 No -24 0.4 No 46 33.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 111730987 - NM_001271833 DENND2D 1 0.05 0.14 9 0.73 0 13 3.82 No 42 0.88 Yes 0 0 No -30 0.85 Yes 40 76.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111733688 - NM_001271833 DENND2D 1 1.59 3.1 60 6.64 87.64 23 4.62 No 74 0.82 Yes 0 0 No -22 0.59 No 48 55.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 111734889 - NM_001271833 DENND2D 1 0.06 0.13 7 7.44 84.45 41 6.59 Yes 66 2.39 Yes 0 0 No -22 0.39 No 52 51.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 111738451 - NM_001271833 DENND2D 1 1.45 2.89 66 7.67 83.92 24 7.07 Yes 11 1.71 Yes 23 0.94 Yes -23 0.96 Yes 47 96.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 111745068 - NM_001271833 DENND2D 1 2.96 2.4 63 6.63 87.64 28 5.35 No 61 1.24 Yes 27 0.77 Yes -27 0.79 Yes 43 53.69 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 111746385 - NM_001271833 DENND2D 1 0.14 0.13 9 6.76 77.93 31 7.11 Yes 18 1.46 Yes 0 0 No -30 0.77 Yes 40 57.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 142150196 + NM_014957 DENND3 1 0.69 0.22 11 7.45 86.34 21 7.21 Yes 8 1.3 Yes 0 0 No -20 0.9 Yes 50 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 142152154 + NM_014957 DENND3 1 0.55 0.11 8 9.9 84.16 33 5.16 No 2 0.34 No 0 0 No -22 0.57 No 40 58.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 142152398 + NM_014957 DENND3 1 7.71 1.46 53 4.62 83.45 26 5.08 No 13 0.38 No 25 0.9 Yes -25 0.75 Yes 45 55.89 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 142152904 + NM_014957 DENND3 1 0.86 0.22 12 7.31 68.06 31 5.57 Yes 18 1.8 Yes 0 0 No -30 0.84 Yes 40 92.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 142154504 + NM_014957 DENND3 1 0.3 0.11 7 11.15 78.3 21 6.06 Yes 8 2.28 Yes 0 0 No -28 0.52 No 42 63.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 142160196 + NM_014957 DENND3 1 0.95 0.36 18 7.66 74.59 46 8.04 Yes 33 1.69 Yes 0 0 No -45 0.88 Yes 25 92.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 142160384 + NM_014957 DENND3 1 0.4 0.18 10 8.9 91.69 30 6.46 Yes 17 1.22 Yes 29 0.76 Yes -29 0.79 Yes 41 85.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 142161685 + NM_014957 DENND3 1 0.34 0.22 12 7.07 81.94 34 6.32 Yes 69 -2.05 No 23 0.95 Yes -20 0.55 No 50 71.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 142165928 + NM_014957 DENND3 1 0.31 0.13 7 10.04 83.63 25 5.91 Yes 58 0.09 No 23 0.84 Yes -34 0.34 No 40 37.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 142170297 + NM_014957 DENND3 1 0.25 0.11 7 8.36 85.05 28 6.16 Yes 40 0.55 No 0 0 No -31 0.65 No 39 77.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 142175321 + NM_014957 DENND3 1 0.49 0.18 10 7.19 82.01 33 5.42 No 48 1.79 Yes 0 0 No -32 0.63 No 48 60.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 142175321 + NM_014957 DENND3 1 0.85 0.25 14 7.19 82.01 33 5.42 No 48 1.79 Yes 0 0 No -32 0.63 No 48 60.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 142183270 + NM_014957 DENND3 1 0.46 0.14 9 0.95 78.1 15 4.04 No 2 1.05 Yes 0 0 No -21 0.95 Yes 49 92.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 142183425 + NM_014957 DENND3 1 1.25 0.46 24 1.29 61.69 41 7.42 Yes 68 1.2 Yes 0 0 No -40 0.85 Yes 30 93.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 142183538 + NM_014957 DENND3 1 0.36 0.15 9 4.73 80.65 21 5.1 No 8 1.23 Yes 0 0 No -19 0.78 Yes 50 80.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 142185303 + NM_014957 DENND3 1 0.29 0.1 7 -1.77 0 38 6.63 Yes 25 0.46 No 0 0 No -38 0.69 Yes 32 85.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 142192419 + NM_014957 DENND3 1 3.54 1.32 35 10.07 91.48 27 5.37 No 74 0.48 No 0 0 No -27 0.33 No 41 60.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 142198546 + NM_014957 DENND3 1 1.8 0.78 34 5.12 68.55 27 8.12 Yes 14 1.37 Yes 0 0 No -26 0.79 Yes 44 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 142202007 + NM_014957 DENND3 1 5.24 1.19 41 10.04 92.15 29 4.61 No 35 0.68 No 0 0 No -28 0.77 Yes 42 78.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 142203028 + NM_014957 DENND3 1 0.9 0.15 10 5.07 87.94 23 5.19 No 10 0.65 No 0 0 No -22 0.74 Yes 48 84.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 142203852 + NM_014957 DENND3 1 3.32 0.46 24 8.24 81.81 27 5.69 Yes 11 0.52 No 0 0 No -26 0.82 Yes 44 91.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 65957564 - NM_005848 DENND4A 1 0.25 0.57 30 11.52 99.37 36 7.91 Yes 23 1.68 Yes 0 0 No -24 0.59 No 46 48.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65962251 - NM_005848 DENND4A 1 0.3 0.64 31 -1.41 71.73 23 4.56 No 42 0.58 No 0 0 No -22 0.83 Yes 48 66.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 65962285 - NM_005848 DENND4A 1 0.12 0.26 17 4.6 75.66 21 6.17 Yes 51 0.85 Yes 27 0.89 Yes -21 0.43 No 38 46.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 65968903 - NM_005848 DENND4A 1 0.71 1.4 49 8.02 84.95 19 5.83 Yes 45 1.27 Yes 0 0 No -18 0.66 No 52 63.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65968939 - NM_005848 DENND4A 1 0.25 0.49 23 3.04 0 14 4.47 No 9 1.29 Yes 0 0 No -21 0.89 Yes 49 95.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65972732 - NM_005848 DENND4A 1 1.02 1.89 60 1.52 64.39 44 7.66 Yes 31 0.29 No 0 0 No -43 0.61 No 33 59.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 65973653 - NM_005848 DENND4A 1 0.29 0.54 29 5.29 87.2 21 6.16 Yes 9 -1.58 No 25 0.57 Yes -20 0.6 No 50 56.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 65974583 - NM_005848 DENND4A 1 0.06 0.11 7 4.93 83.06 22 4.69 No 54 -4.4 No 0 0 No -21 0.7 Yes 49 71.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 65975184 - NM_005848 DENND4A 1 0.12 0.24 14 11.46 87.77 20 9.59 Yes 7 2.19 Yes 0 0 No -19 0.44 No 51 62.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65993011 - NM_005848 DENND4A 1 20.05 28.49 72 5.1 80.41 30 6.3 Yes 43 0.99 Yes 29 0.55 Yes -30 0.39 No 41 42.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 65993014 - NM_005848 DENND4A 1 9.84 14.07 72 2.8 74.71 27 6.06 Yes 40 0.99 Yes 29 0.55 Yes -27 0.42 No 44 44.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 65999312 - NM_005848 DENND4A 1 0.13 0.22 14 5.63 89.64 25 7.06 Yes 51 0.5 No 0 0 No -24 0.53 No 45 52.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 66015286 - NM_005848 DENND4A 1 0.05 0.13 8 -10.94 0 34 7.07 Yes 21 0.55 No 0 0 No -33 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 66018273 - NM_005848 DENND4A 1 0.09 0.22 13 7.35 79.57 27 5.57 Yes 14 1.57 Yes 0 0 No -26 0.88 Yes 44 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66025111 - NM_005848 DENND4A 1 0.73 1.61 57 10.43 85.42 24 5.39 No 55 1.24 Yes 0 0 No -26 0.85 Yes 44 84.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66032781 - NM_005848 DENND4A 1 0.03 0.1 7 5.79 87 26 8.12 Yes 13 1.48 Yes 0 0 No -25 0.94 Yes 45 94.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66032784 - NM_005848 DENND4A 1 0.2 0.6 24 8.95 85.86 23 7.94 Yes 10 1.51 Yes 0 0 No -22 0.93 Yes 48 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66044778 - NM_005848 DENND4A 1 1.25 2.85 64 1.7 77.92 23 7.05 Yes 10 0.19 No 0 0 No -22 0.84 Yes 48 87.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 66059745 - NM_005848 DENND4A 1 0.41 0.24 12 4.71 82.42 30 5.2 No 7 0.56 No 0 0 No -29 0.67 Yes 41 61.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 153903499 - NM_014856 DENND4B 1 0.1 0.11 7 4.51 0 18 4.47 No 12 2.24 Yes 0 0 No -17 0.72 Yes 46 59.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 153906024 - NM_014856 DENND4B 1 1.89 1.11 43 5.51 78.48 16 5.74 Yes 3 2.16 Yes 0 0 No -27 0.68 Yes 43 76.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153906342 - NM_014856 DENND4B 1 0.76 0.43 26 -3.29 0 13 3.24 No 13 1.2 Yes 0 0 No -35 0.61 No 35 73.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 153907404 - NM_014856 DENND4B 1 0.79 0.54 34 3.82 77.06 22 5.29 No 69 -6.24 No 0 0 No -22 0.57 No 48 34.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 153912976 - NM_014856 DENND4B 1 0.38 0.33 17 3.93 77.48 21 6.07 Yes 26 0.71 No 0 0 No -20 0.85 Yes 50 84.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 153913197 - NM_014856 DENND4B 1 0.3 0.25 15 0.69 81.88 12 4.49 No 66 1.04 Yes 0 0 No -18 0.58 No 54 51.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 153913871 - NM_014856 DENND4B 1 1.57 1.39 54 13.06 84.87 27 7.15 Yes 55 2.39 Yes 0 0 No -30 0.56 No 44 74.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 153913871 - NM_014856 DENND4B 1 1.82 1.64 59 13.06 84.87 27 7.15 Yes 55 2.39 Yes 0 0 No -30 0.56 No 44 74.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 153913871 - NM_014856 DENND4B 1 0.33 0.28 15 13.06 84.87 27 7.15 Yes 55 2.39 Yes 0 0 No -30 0.56 No 44 74.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 19233579 + NM_017925 DENND4C 1 2.31 1.04 42 4.74 84.41 38 6.84 Yes 13 0.46 No 0 0 No -25 0.68 Yes 45 47.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 19233585 + NM_017925 DENND4C 1 0.77 0.31 18 -0.43 0 9 3.87 No 19 0.46 No 0 0 No -31 0.62 No 39 47.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19290714 + NM_017925 DENND4C 1 0.15 0.17 9 5.43 77.17 19 4.68 No 40 0.38 No 20 0.36 Yes -18 0.37 No 45 75.15 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 19289088 + NM_017925 DENND4C 1 0.41 0.46 23 4.68 71.02 62 7.85 Yes 49 0.52 No 0 0 No -31 0.55 No 39 44.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19289121 + NM_017925 DENND4C 1 0.15 0.15 9 4.08 76.49 38 6.48 Yes 67 0.48 No 0 0 No -29 0.57 No 41 77.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 19290714 + NM_017925 DENND4C 1 0.21 0.22 14 5.43 77.17 19 4.68 No 40 0.38 No 20 0.36 Yes -18 0.37 No 45 75.15 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 19292209 + NM_017925 DENND4C 1 0.28 0.31 13 7.25 85.86 23 5.83 Yes 10 1.25 Yes 0 0 No -22 0.89 Yes 48 93.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 19305413 + NM_017925 DENND4C 1 0.23 0.24 15 5.91 80.34 42 5.36 No 75 0.5 No 0 0 No -35 0.53 No 37 63.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19305440 + NM_017925 DENND4C 1 0.52 0.56 32 5.47 79.88 23 5.37 No 76 0.42 No 0 0 No -22 0.92 Yes 48 95.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19323852 + NM_017925 DENND4C 1 1.14 1.17 41 6.01 71 29 5.48 No 16 0.07 No 0 0 No -28 0.79 Yes 42 74.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19333498 + NM_017925 DENND4C 1 0.4 0.22 11 11.36 86.32 28 7.35 Yes 71 -1.64 No 0 0 No -28 0.47 No 43 75.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 19334087 + NM_017925 DENND4C 1 1.3 0.63 32 10 96.42 16 5.08 No 49 0.54 No 0 0 No -27 0.74 Yes 43 81.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19334548 + NM_017925 DENND4C 1 0.64 0.31 19 2.56 0 55 6.07 Yes 42 0.57 No 0 0 No -54 0.79 Yes 22 51.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 19345922 + NM_017925 DENND4C 1 0.34 0.19 11 0.11 0 26 6.48 Yes 13 1.04 Yes 0 0 No -32 0.78 Yes 38 82.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 19358025 + NM_017925 DENND4C 1 0.12 0.13 9 5.29 73.33 24 6.69 Yes 3 0.1 No 0 0 No -26 0.66 Yes 44 53.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 19360417 + NM_017925 DENND4C 1 0.29 0.29 18 5.04 84.16 66 5.92 Yes 49 0.56 No 0 0 No -29 0.72 Yes 41 63.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 19372036 + NM_017925 DENND4C 1 0.22 0.11 7 -2.95 82.83 59 5.4 No 46 0.45 No 0 0 No -29 0.73 Yes 41 74.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 9161796 - NM_015213 DENND5A 1 5.63 2.81 63 5.83 83.07 24 4.16 No 56 0.98 Yes 23 0.64 Yes -24 0.57 No 47 65.24 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 9163124 - NM_015213 DENND5A 1 0.2 0.11 8 9.75 98.88 32 4.03 No 49 1.05 Yes 0 0 No -31 0.83 Yes 42 76.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9172294 - NM_015213 DENND5A 1 0.2 0.11 8 3.53 84.49 26 5.2 No 25 0.66 No 24 0.65 Yes -25 0.94 Yes 45 90.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 9172745 - NM_015213 DENND5A 1 0.18 0.13 8 7.3 82.16 25 7 Yes 46 -1.23 No 0 0 No -24 0.75 Yes 46 71.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 9181847 - NM_015213 DENND5A 1 0.23 0.17 10 8.31 92.66 20 6.16 Yes 7 1.34 Yes 0 0 No -19 0.58 No 47 76.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 9197242 - NM_015213 DENND5A 1 2.32 0.97 38 2.39 57.48 38 7.57 Yes 25 1.42 Yes 37 0.74 Yes -37 0.9 Yes 33 94.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 9198450 - NM_015213 DENND5A 1 0.35 0.15 9 8.47 84.91 22 6.24 Yes 9 1.38 Yes 21 0.93 Yes -21 0.91 Yes 49 90.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 9215118 - NM_015213 DENND5A 1 0.38 0.32 16 8.91 76.32 24 5.48 No 55 1.44 Yes 0 0 No -26 0.52 No 47 73.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 31572378 - NM_001308339 DENND5B 1 0.37 0.14 8 1.87 84.41 32 7.53 Yes 19 1.33 Yes 0 0 No -31 0.6 No 39 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 31632073 - NM_001308339 DENND5B 1 0.27 0.18 9 5.28 84.75 33 4.05 No -3 0.77 Yes 0 0 No -32 0.5 No 49 43.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 31632400 - NM_001308339 DENND5B 1 0.45 0.32 18 7.27 83.52 29 5.08 No 16 0.4 No 0 0 No -28 0.83 Yes 42 84.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 31635372 - NM_001308339 DENND5B 1 0.23 0.18 10 2.39 57.89 31 5.57 Yes 18 0.37 No 0 0 No -30 0.7 Yes 40 46.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 31643538 - NM_001308339 DENND5B 1 0.6 0.36 19 5.03 0 32 6.14 Yes 13 0.61 No 0 0 No -31 0.87 Yes 39 95.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 57623834 - NM_152678 DENND6A 1 1.5 0.25 17 7.46 89.2 27 5.2 No 49 0.7 No 0 0 No -47 0.52 No 23 79.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 57629874 - NM_152678 DENND6A 1 0.69 0.22 15 4.74 84.41 26 5.48 No 13 1.46 Yes 0 0 No -25 0.86 Yes 45 93.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 57647219 - NM_152678 DENND6A 1 1.48 0.57 29 7.72 76.76 33 6.87 Yes 50 0.89 Yes 0 0 No -26 0.73 Yes 44 63.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 57649441 - NM_152678 DENND6A 1 11.03 3.43 68 5.13 85.58 24 7.87 Yes 11 1.09 Yes 0 0 No -23 0.93 Yes 47 90.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 57658054 - NM_152678 DENND6A 1 0.73 0.19 13 1.56 74.49 45 7.21 Yes 69 0.39 No 30 0.78 Yes -44 0.79 Yes 26 75.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 57665453 - NM_152678 DENND6A 1 46.82 5.6 71 9.74 92.97 31 5.74 Yes 38 -2.01 No 0 0 No -28 0.82 Yes 42 96.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50751526 - NM_001001794 DENND6B 1 0.82 0.54 27 5.2 0 15 4.58 No 16 1.79 Yes 0 0 No -40 0.5 No 42 84.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 50752267 - NM_001001794 DENND6B 1 0.45 0.49 25 0.2 65.07 27 7.07 Yes 14 0.93 Yes 0 0 No -26 0.94 Yes 44 45.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 50752872 - NM_001001794 DENND6B 1 29.87 1.53 51 2.98 69.2 31 6.4 Yes 18 0.06 No 0 0 No -30 0.87 Yes 40 93.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123238957 + NM_003677 DENR 1 0.69 1.86 58 7.08 78.58 34 5.74 Yes 36 0.25 No 0 0 No -33 0.73 Yes 37 80.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123247804 + NM_003677 DENR 1 0.07 0.26 12 -5.67 40.81 45 6.84 Yes 32 1.17 Yes 0 0 No -44 0.52 No 26 52.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 123249851 + NM_003677 DENR 1 0.07 0.29 19 -12.98 0 37 6.57 Yes 18 1.25 Yes 0 0 No -30 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 123252741 + NM_003677 DENR 1 0.11 0.47 30 3.35 70.39 48 6.8 Yes 35 1.29 Yes 0 0 No -47 0.91 Yes 23 97.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123253298 + NM_003677 DENR 1 0.05 0.24 9 5.38 77.28 44 6.81 Yes 64 0.88 Yes 0 0 No -24 0.59 No 46 74.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 123253584 + NM_003677 DENR 1 0.06 0.17 12 1.43 0 33 5.25 No 20 0.24 No 0 0 No -32 0.94 Yes 38 97.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 68942747 - NM_001114120 DEPDC1 1 0.54 0.28 16 2.74 0 16 3.87 No 8 1.71 Yes 0 0 No -27 0.68 Yes 43 80.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 68952099 - NM_001114120 DEPDC1 1 0.29 0.15 11 8.56 86.22 21 5.59 Yes 0 0.16 No 0 0 No -20 0.81 Yes 50 83.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 59893736 - NM_018369 DEPDC1B 1 0.49 0.43 25 2.45 0 9 3.87 No 4 0.48 No 0 0 No -34 0.43 No 47 39.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 59914644 - NM_018369 DEPDC1B 1 0.23 0.11 7 8.85 88.97 32 6.63 Yes 19 0.66 No 0 0 No -32 0.46 No 33 44.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 59924191 - NM_018369 DEPDC1B 1 0.52 0.19 10 10.57 92.75 20 5.17 No 7 0.95 Yes 0 0 No -29 0.7 Yes 41 76.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 59925108 - NM_018369 DEPDC1B 1 0.22 0.13 8 3.83 78.67 45 5.59 Yes 55 -3.74 No 0 0 No -23 0.72 Yes 47 67.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 59927346 - NM_018369 DEPDC1B 1 2.42 1.08 40 12.58 92.83 21 5.2 No 65 1.01 Yes 0 0 No -26 0.68 Yes 44 73.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 59932536 - NM_018369 DEPDC1B 1 0.25 0.13 8 2.86 75.42 23 6.07 Yes 58 1.77 Yes 0 0 No -22 0.81 Yes 48 97.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 59938684 - NM_018369 DEPDC1B 1 2.29 1.44 50 3.46 79.63 29 5.92 Yes 70 0.65 No 0 0 No -28 0.59 No 42 64.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 59983666 - NM_018369 DEPDC1B 1 1.23 0.35 23 7.86 77.36 24 5.29 No 65 0.49 No 23 0.91 Yes -23 0.87 Yes 47 97.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 59991133 - NM_018369 DEPDC1B 1 0.99 0.21 13 3.42 60.68 80 10.28 Yes 67 2.06 Yes 0 0 No -21 0.61 No 49 53.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 32154512 + NM_001242897 DEPDC5 1 0.86 0.39 22 2.61 81.02 23 5.09 No 10 0.93 Yes 0 0 No -22 0.74 Yes 48 90.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 32180956 + NM_001242897 DEPDC5 1 0.31 0.11 7 -7.77 62.43 37 5.57 Yes 37 0.43 No 0 0 No -36 0.37 No 34 42.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 32180965 + NM_001242897 DEPDC5 1 1.3 0.46 21 0.74 0 17 4.16 No 4 0.66 No 0 0 No -16 0.44 No 54 42.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 32193279 + NM_001242897 DEPDC5 1 0.66 0.24 14 3.5 79.62 24 6.07 Yes 59 -4.48 No 0 0 No -27 0.62 No 43 56.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 32211401 + NM_001242897 DEPDC5 1 4.61 1.85 55 7.34 89.54 38 7.68 Yes 25 0.2 No 37 0.48 Yes -35 0.54 No 35 66.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 32217487 + NM_001242897 DEPDC5 1 432.52 31.74 72 6.44 81.19 28 5.26 No 9 0.85 Yes 21 0.88 Yes -21 0.85 Yes 49 94.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 32218678 + NM_001242897 DEPDC5 1 1.92 0.19 10 10.15 95.68 31 5.71 Yes 48 -2.46 No 30 0.67 Yes -30 0.79 Yes 40 75.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 32232984 + NM_001242897 DEPDC5 1 74.41 14.01 72 9.08 76.46 23 6 Yes 10 1.89 Yes 22 0.94 Yes -22 0.92 Yes 48 93.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 32233079 + NM_001242897 DEPDC5 1 10.29 2.03 59 7.1 82.25 52 7.94 Yes -4 1.67 Yes 27 0.9 Yes -27 0.9 Yes 43 75.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 32257353 + NM_001242897 DEPDC5 1 1.04 0.28 17 7.63 87.66 156 9.19 Yes 60 0.92 Yes 36 0.35 Yes -36 0.69 Yes 34 59.75 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 32270263 + NM_001242897 DEPDC5 1 1.55 0.28 14 -1.98 0 76 9.85 Yes 63 0.51 No 0 0 No -22 0.49 No 26 33.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 32272072 + NM_001242897 DEPDC5 1 1.03 0.24 16 8.51 87.56 17 5.47 No 16 1.09 Yes 0 0 No -28 0.82 Yes 42 85.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 32291344 + NM_001242897 DEPDC5 1 1.48 0.29 18 12.18 82.64 34 7.21 Yes 21 1.61 Yes 0 0 No -33 0.73 Yes 37 93.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 16064624 + NM_001300779 DERA 1 0.89 0.47 21 9.68 79.72 31 6.03 Yes 62 0.9 Yes 27 0.53 Yes -27 0.51 No 43 74.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 16069050 + NM_001300779 DERA 1 0.24 0.15 10 5.11 80.33 46 5.7 Yes 10 1.55 Yes 22 0.64 Yes -22 0.35 No 47 48.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 16108830 + NM_001300779 DERA 1 0.48 0.31 19 5.59 90.28 23 4.98 No 10 1.25 Yes 0 0 No -22 0.86 Yes 48 91.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 16111173 + NM_001300779 DERA 1 1.38 1.64 56 7.04 87.49 14 4.58 No 25 0.78 Yes 22 0.84 Yes -22 0.72 Yes 48 73.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 16113656 + NM_001300779 DERA 1 0.42 0.86 35 3.34 81.49 14 4.04 No 74 -5.36 No 0 0 No -24 0.9 Yes 46 84.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 16189169 + NM_001300779 DERA 1 0.29 0.26 17 3.11 0 43 6.29 Yes 30 0.76 No 0 0 No -42 0.49 No 33 61.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 16189280 + NM_001300779 DERA 1 0.17 0.17 10 3.81 78.3 23 4.9 No 37 -2.98 No 0 0 No -22 0.72 Yes 48 72.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 124031193 - NM_001330601 DERL1 1 0.05 0.13 8 2.8 85.67 24 4.9 No 49 0.82 Yes 0 0 No -23 0.78 Yes 47 67.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 124031486 - NM_001330601 DERL1 1 1.04 2.31 58 7.19 82.84 45 6.66 Yes -4 0.85 Yes 27 0.6 Yes -27 0.73 Yes 43 83.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 5381320 - NM_001304777 DERL2 1 1.47 4.15 68 7.74 84.08 24 6 Yes 11 1.22 Yes 23 0.94 Yes -23 0.9 Yes 47 95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 5382791 - NM_001304777 DERL2 1 0.05 0.14 9 4.21 77.41 15 3.99 No 2 1.52 Yes 0 0 No -26 0.6 No 44 25.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5382809 - NM_001304777 DERL2 1 0.09 0.28 16 -8.68 80.72 52 8.17 Yes 39 1.45 Yes 0 0 No -51 0.73 Yes 19 76.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5384460 - NM_001304777 DERL2 1 0.66 1.28 53 0.79 70.92 22 5 No 31 -1.23 No 0 0 No -21 0.65 No 49 53.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 5384463 - NM_001304777 DERL2 1 1.55 3 64 0.96 68.41 19 4.69 No 28 -1.23 No 18 0.85 Yes -18 0.55 No 52 51.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 5384476 - NM_001304777 DERL2 1 0.05 0.13 7 1.71 73.56 28 4.08 No 73 1.04 Yes 18 0.85 Yes -22 0.49 No 48 55.75 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 5384494 - NM_001304777 DERL2 1 0.53 1.07 42 8.26 90.3 31 4.04 No 55 1.04 Yes 18 0.85 Yes -24 0.86 Yes 46 91.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 5384708 - NM_001304777 DERL2 1 0.09 0.13 7 -20.37 0 65 7.33 Yes 46 0.65 No 0 0 No -28 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 24177167 - NM_001135751 DERL3 1 23.67 2.08 53 5.64 85.22 23 4.9 No 36 -0.08 No 0 0 No -20 0.64 No 50 49.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 24179150 - NM_001135751 DERL3 1 434.37 37.13 72 9.76 80.03 22 8.11 Yes 9 0.52 No 21 0.89 Yes -21 0.9 Yes 49 90.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 24179706 - NM_001135751 DERL3 1 0.26 0.13 9 8.64 82.67 37 7.28 Yes 24 1.3 Yes 0 0 No -36 0.68 Yes 34 93.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24179919 - NM_001135751 DERL3 1 1.65 0.9 38 8.09 92.16 34 5.5 No -3 0.62 No 27 0.73 Yes -27 0.71 Yes 43 59.88 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 24180904 - NM_001135751 DERL3 1 2.85 1.25 44 3.22 72.45 25 5.24 No 33 1.13 Yes 24 0.88 Yes -24 0.92 Yes 46 60.36 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 24180961 - NM_001135751 DERL3 1 5.56 2.28 62 1.89 76.62 24 6.16 Yes 11 0.92 Yes 0 0 No -23 0.93 Yes 47 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41998783 - NM_015704 DESI1 1 0.05 0.25 15 -1.46 0 49 8.35 Yes 28 0.94 Yes 0 0 No -26 0.42 No 34 67.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41998788 - NM_015704 DESI1 1 3.06 16.14 72 8.46 81.62 44 8.13 Yes 23 0.94 Yes 21 0.62 Yes -35 0.44 No 39 66.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 41999341 - NM_015704 DESI1 1 1 6.14 72 3.05 77.02 41 6.81 Yes -2 0.55 No 0 0 No -32 0.57 No 48 62.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 42001973 - NM_015704 DESI1 1 0.21 0.65 32 2.89 61.83 32 7.69 Yes 66 2.03 Yes 0 0 No -31 0.92 Yes 39 90.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42002775 - NM_015704 DESI1 1 0.04 0.11 7 4.74 84.41 40 6.47 Yes 46 1.24 Yes 0 0 No -39 0.41 No 31 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 42003018 - NM_015704 DESI1 1 2.55 7.92 72 12.24 90.26 28 4.54 No 10 0.42 No 0 0 No -22 0.51 No 48 42.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 42003634 - NM_015704 DESI1 1 0.83 1.78 56 6.58 86.71 26 5.48 No 71 1.31 Yes 0 0 No -23 0.43 No 47 39.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 244817214 + NM_001297746 DESI2 1 1.85 1.15 48 7.52 80.24 38 5.62 Yes 65 -2.97 No 0 0 No -26 0.83 Yes 44 87.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 244819597 + NM_001297746 DESI2 1 0.55 0.35 20 9.75 86.24 23 6 Yes 10 1.32 Yes 22 0.9 Yes -22 0.9 Yes 48 91.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 244835703 + NM_001297746 DESI2 1 0.53 0.32 17 1 58.83 41 9.95 Yes 28 1.43 Yes 0 0 No -40 0.92 Yes 30 93.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 244842365 + NM_001297746 DESI2 1 0.24 0.15 10 4.02 0 37 7.28 Yes 69 1.16 Yes 0 0 No -36 0.72 Yes 34 85.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 244845169 + NM_001297746 DESI2 1 3.24 2.08 57 6.9 90.21 21 5.2 No 20 0.94 Yes 0 0 No -20 0.86 Yes 50 80.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 244863162 + NM_001297746 DESI2 1 1.09 1.14 46 6.48 76.03 67 8.87 Yes 54 1.44 Yes 0 0 No -25 0.75 Yes 45 65.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 11027862 - NM_014015 DEXI 1 5.15 2.54 70 7.08 91.09 18 5.43 No 5 1.4 Yes 0 0 No -31 0.8 Yes 39 73.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11032965 - NM_014015 DEXI 1 1.55 0.78 37 7.26 78.27 25 5.61 Yes 12 0.45 No 0 0 No -24 0.72 Yes 46 64.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 11035307 - NM_014015 DEXI 1 16.05 8.28 72 10.74 90.89 29 5.88 Yes 16 1.07 Yes 0 0 No -28 0.89 Yes 42 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 3782847 + NM_001282669 DFFB 1 9.47 0.68 34 8.1 88.21 27 5.2 No 28 -1.26 No 26 0.84 Yes -26 0.83 Yes 44 74.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 24741046 - NM_001127453 DFNA5 1 0.11 0.14 9 12.61 85.8 27 5.19 No 34 2.03 Yes 0 0 No -26 0.87 Yes 44 90.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 24747045 - NM_001127453 DFNA5 1 3.97 4.46 63 9.6 86.62 31 5.83 Yes 46 0.01 No 30 0.5 Yes -30 0.45 No 39 43.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 24755193 - NM_001127453 DFNA5 1 0.18 0.28 16 5.66 80.23 26 5.91 Yes 13 0.79 Yes 25 0.93 Yes -25 0.76 Yes 45 82.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 24758804 - NM_001127453 DFNA5 1 0.16 0.17 10 4.93 85.48 28 4.75 No 51 1.57 Yes 0 0 No -21 0.62 No 15 80.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 24768683 - NM_001127453 DFNA5 1 0.17 0.13 8 13.5 97.57 23 5.6 Yes 14 1.27 Yes 0 0 No -26 0.94 Yes 44 95.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145540337 - NM_012079 DGAT1 1 0.38 0.18 10 6.45 90.04 46 5.53 No 45 1.85 Yes 0 0 No -31 0.53 No 39 63.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75484766 + NM_032564 DGAT2 1 0.76 0.18 11 4.36 81.19 24 5.02 No 7 0.51 No 23 0.89 Yes -23 0.91 Yes 47 92.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 75507339 + NM_032564 DGAT2 1 0.19 0.1 7 6.89 83.67 54 8.37 Yes 41 1.16 Yes 20 0.94 Yes -53 0.44 No 17 46.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 75507359 + NM_032564 DGAT2 1 0.22 0.11 7 4.88 77.56 23 3.92 No 61 1.15 Yes 20 0.94 Yes -22 0.57 No 48 68.69 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 75511249 + NM_032564 DGAT2 1 0.5 0.26 17 5.8 79.5 21 5.2 No 8 0.94 Yes 0 0 No -20 0.79 Yes 50 90.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19028783 - NM_005137 DGCR2 1 0.32 0.24 12 5.58 76.4 35 5.83 Yes 52 1.44 Yes 0 0 No -22 0.42 No 48 34.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 19028817 - NM_005137 DGCR2 1 0.25 0.17 12 -3.57 0 31 6.4 Yes 18 1.46 Yes 18 0.28 Yes -30 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 19040119 - NM_005137 DGCR2 1 2.9 2.24 62 8.58 88.27 28 7.58 Yes 15 0.24 No 0 0 No -27 0.93 Yes 43 89.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 19044700 - NM_005137 DGCR2 1 0.12 0.1 7 3.77 75.12 17 6 Yes 4 0.44 No 26 0.67 Yes -31 0.78 Yes 39 79.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 19048469 - NM_005137 DGCR2 1 0.12 0.11 8 7.06 76.3 75 7.69 Yes 48 0.18 No 30 0.49 Yes -39 0.78 Yes 31 80.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 19052572 - NM_005137 DGCR2 1 22.04 12.19 72 9.41 87.92 42 7.74 Yes 29 1.27 Yes 32 0.88 Yes -41 0.36 No 29 54.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 19052572 - NM_005137 DGCR2 1 0.26 0.15 11 9.41 87.92 42 7.74 Yes 29 1.27 Yes 32 0.88 Yes -41 0.36 No 29 54.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 19052589 - NM_005137 DGCR2 1 1.58 0.85 37 -7.06 0 25 6.56 Yes 12 1.05 Yes 32 0.88 Yes -24 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 19059133 - NM_005137 DGCR2 1 0.21 0.13 9 -8.42 0 19 4.24 No 6 0.17 No 0 0 No -55 0.46 No 15 49.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 19079854 - NM_005137 DGCR2 1 0.13 0.11 8 6.68 85.05 26 5.2 No 13 1.09 Yes 0 0 No -25 0.85 Yes 45 94.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19086680 - NM_005137 DGCR2 1 0.45 0.31 17 7.52 80.33 24 7.23 Yes 11 1.24 Yes 0 0 No -23 0.89 Yes 47 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19087755 - NM_005137 DGCR2 1 0.17 0.11 7 5.42 90.13 27 5.2 No 35 1.5 Yes 0 0 No -26 0.78 Yes 44 63.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 20303044 - NM_033257 DGCR6L 1 1.08 0.65 31 6.41 75.67 24 6.19 Yes 11 1.95 Yes 0 0 No -23 0.65 No 47 60.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 20074672 + NM_001190326 DGCR8 1 0.36 0.31 19 6.08 73.59 29 5.39 No 39 0.71 No 19 0.32 Yes -28 0.59 No 42 47.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 20075460 + NM_001190326 DGCR8 1 0.2 0.18 12 5.79 78.71 26 5.66 Yes 13 0.18 No 0 0 No -25 0.63 No 45 62.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 20080331 + NM_001190326 DGCR8 1 1672.43 76.17 72 3.64 78.9 15 4.86 No 25 0.74 No 23 0.81 Yes -23 0.55 No 47 45.55 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 20096415 + NM_001190326 DGCR8 1 2.02 1.69 52 -13.88 69.74 28 4.97 No 9 -1.45 No 0 0 No -27 0.85 Yes 43 81.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56325524 + NM_001345 DGKA 1 0.44 0.14 9 7.15 92.57 31 6.08 Yes 68 -2.9 No 0 0 No -30 0.78 Yes 40 86.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56329088 + NM_001345 DGKA 1 1.1 0.31 16 10.53 85.59 32 6.23 Yes 58 1.12 Yes 18 0.62 Yes -18 0.76 Yes 39 45.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 56332421 + NM_001345 DGKA 1 3.76 1.22 48 7.67 87.02 35 7.48 Yes 22 0.98 Yes 34 0.84 Yes -34 0.78 Yes 36 91.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56332722 + NM_001345 DGKA 1 1.33 0.53 26 6.07 80.54 15 5.25 No -3 -0.93 No 25 0.81 Yes -26 0.59 No 53 48.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56333178 + NM_001345 DGKA 1 0.77 0.24 13 2.47 70.89 21 4.39 No -1 0.29 No 22 0.69 Yes -21 0.7 Yes 49 62.33 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 56334035 + NM_001345 DGKA 1 0.8 0.31 14 4.41 80.04 75 8.65 Yes 57 1.25 Yes 25 0.11 Yes -43 0.56 No 27 42.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 56334051 + NM_001345 DGKA 1 0.6 0.19 13 11.26 79.08 19 5 No 6 1.37 Yes 0 0 No -23 0.85 Yes 52 66.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 56337080 + NM_001345 DGKA 1 1.22 0.53 28 2.58 83.92 31 5.24 No 18 1.36 Yes 30 0.92 Yes -34 0.75 Yes 36 81.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56346655 + NM_001345 DGKA 1 0.3 0.13 8 2.72 67.6 27 6.31 Yes 29 -2.02 No 0 0 No -26 0.69 Yes 44 42.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 56347054 + NM_001345 DGKA 1 0.28 0.15 11 1.63 64.01 26 5.39 No -1 0 No 0 0 No -25 0.74 Yes 59 35.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 234297412 + NM_152879 DGKD 1 0.18 0.15 10 -1.01 84.41 33 6.16 Yes 20 0.92 Yes 0 0 No -32 0.47 No 38 76.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 234297414 + NM_152879 DGKD 1 0.27 0.22 11 -4.03 87.48 35 6.32 Yes 22 0.9 Yes 0 0 No -34 0.49 No 36 76.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 234298494 + NM_152879 DGKD 1 0.69 0.57 28 8.28 96.14 24 4.9 No 24 2.02 Yes 0 0 No -23 0.72 Yes 53 70.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234298540 + NM_152879 DGKD 1 0.62 0.54 27 6.56 81.11 27 6.98 Yes 70 2.03 Yes 0 0 No -26 0.69 Yes 44 75.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234298574 + NM_152879 DGKD 1 4.64 4.21 69 10.32 90.3 43 6.53 Yes 30 0.44 No 0 0 No -25 0.76 Yes 45 86.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 234300715 + NM_152879 DGKD 1 3.87 3.57 66 7.72 90.66 27 5.74 Yes 27 0.49 No 26 0.78 Yes -26 0.73 Yes 44 59.87 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 234306974 + NM_152879 DGKD 1 1.45 1.35 44 7.28 85.02 22 7.21 Yes 9 1.41 Yes 0 0 No -21 0.88 Yes 49 88.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234316710 + NM_152879 DGKD 1 0.29 0.26 16 13.03 95.65 39 6.12 Yes 36 -1.33 No 0 0 No -24 0.47 No 46 56.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 234323152 + NM_152879 DGKD 1 0.16 0.14 8 9.71 89.56 31 5.48 No 18 0.28 No 0 0 No -30 0.85 Yes 40 56.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 234356503 + NM_152879 DGKD 1 0.23 0.18 9 0.3 0 19 4.58 No 6 0.48 No 0 0 No -18 0.87 Yes 52 83.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 234358604 + NM_152879 DGKD 1 1.96 1.47 51 4.31 68.38 34 6.16 Yes 21 1.57 Yes 25 0.96 Yes -33 0.89 Yes 37 87.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 234367282 + NM_152879 DGKD 1 0.32 0.15 10 3.01 0 36 6.6 Yes 23 1.4 Yes 0 0 No -25 0.53 No 35 65.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 234368750 + NM_152879 DGKD 1 3.47 2.24 61 10.5 82.76 17 5.39 No 28 0.81 Yes 0 0 No -16 0.2 No 54 20.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 234368776 + NM_152879 DGKD 1 0.67 0.42 22 6.11 69.16 22 5.92 Yes 54 0.83 Yes 0 0 No -21 0.58 No 42 59.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 234372493 + NM_152879 DGKD 1 0.51 0.29 19 6.96 86.9 17 6.08 Yes 4 1.95 Yes 0 0 No -23 0.67 Yes 47 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 234372806 + NM_152879 DGKD 1 0.27 0.13 7 -0.09 70.19 49 7 Yes 36 1.39 Yes 31 0.51 Yes -28 0.48 No 33 60.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 54923054 + NM_003647 DGKE 1 0.56 0.33 15 -1.86 0 35 5.74 Yes 22 1.33 Yes 0 0 No -21 0.69 Yes 49 71.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 54924720 + NM_003647 DGKE 1 0.84 0.47 24 3.01 0 24 6.1 Yes 11 1.19 Yes 24 0.58 Yes -24 0.67 Yes 46 86.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 54924876 + NM_003647 DGKE 1 0.8 0.46 17 4.47 85.02 17 6.78 Yes 4 1.2 Yes 24 0.46 Yes -24 0.45 No 46 58.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 54925703 + NM_003647 DGKE 1 0.51 0.13 9 6.53 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.77 Yes 51 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 54925703 + NM_003647 DGKE 1 0.59 0.14 9 6.53 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.77 Yes 51 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 54936057 + NM_003647 DGKE 1 0.63 0.17 11 6.53 81.23 21 5.89 Yes 8 1.52 Yes 0 0 No -20 0.8 Yes 50 56.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 54939155 + NM_003647 DGKE 1 3.12 1.24 48 0.6 0 30 6.32 Yes 17 0.51 No 0 0 No -29 0.82 Yes 41 84.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 54939707 + NM_003647 DGKE 1 3.71 0.97 41 7.22 88.91 32 7.27 Yes 76 -4.17 No 0 0 No -23 0.48 No 47 56.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 54940005 + NM_003647 DGKE 1 3.28 0.93 40 3.74 78.82 31 5.46 No 53 1.16 Yes 24 0.75 Yes -30 0.41 No 46 44.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 54940348 + NM_003647 DGKE 1 0.66 0.18 11 8.97 92.27 24 5.39 No 66 0.19 No 0 0 No -23 0.93 Yes 47 96.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 42640226 + NM_001204504 DGKH 1 3.1 0.6 29 -0.89 0 32 5.95 Yes 19 1.79 Yes 0 0 No -31 0.52 No 39 78.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 42693230 + NM_001204504 DGKH 1 3.47 0.76 33 10.48 76 22 6.01 Yes 9 0.9 Yes 0 0 No -30 0.52 No 40 68.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 42727885 + NM_001204504 DGKH 1 7.31 1.76 53 5.59 84.15 39 5.9 Yes 1 1.18 Yes 29 0.47 Yes -38 0.68 Yes 32 83.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 42729833 + NM_001204504 DGKH 1 0.44 0.15 9 3.59 75.78 19 5.55 No 34 1.21 Yes 0 0 No -18 0.73 Yes 52 76.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42747839 + NM_001204504 DGKH 1 0.49 0.21 12 4.33 80.61 20 5.09 No 7 0.4 No 0 0 No -23 0.9 Yes 47 81.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 42769898 + NM_001204504 DGKH 1 0.37 0.14 8 3.95 73.63 29 6.62 Yes 71 1.32 Yes 28 0.69 Yes -28 0.65 No 42 68.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 42778482 + NM_001204504 DGKH 1 0.99 0.24 13 1.54 73.95 20 5.09 No 44 0.37 No 0 0 No -23 0.65 No 47 78.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 42783082 + NM_001204504 DGKH 1 4.84 1.26 46 -7.15 0 19 4.36 No 29 1.15 Yes 18 0.73 Yes -42 0.7 Yes 28 38.93 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 42793368 + NM_001204504 DGKH 1 1.76 0.47 29 -0.19 66.91 44 7.07 Yes 31 1.56 Yes 0 0 No -43 0.91 Yes 27 88.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42795297 + NM_001204504 DGKH 1 0.68 0.17 10 6.88 84.25 18 7.41 Yes 5 1.59 Yes 0 0 No -27 0.47 No 46 56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 42795399 + NM_001204504 DGKH 1 12.03 3.33 68 3.87 72.48 28 5.69 Yes -2 0.1 No 27 0.87 Yes -27 0.74 Yes 43 83.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 957882 - NM_001347 DGKQ 1 2.59 0.39 22 10.02 83.61 26 6.71 Yes NA NA NA 25 0.77 Yes -25 0.75 Yes 45 80.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46389204 + NM_001105540 DGKZ 1 2.58 3.11 60 -18.22 60.48 26 5.29 No 13 0.82 Yes 22 0.97 Yes -25 0.79 Yes 45 68.17 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 46389527 + NM_001105540 DGKZ 1 0.53 0.22 14 2.9 78.92 15 5.2 No 2 0.01 No 26 0.95 Yes -14 0.46 No 56 61.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 46389551 + NM_001105540 DGKZ 1 271.42 124.93 72 9.95 86.82 27 5.74 Yes 14 0.46 No 26 0.95 Yes -26 0.91 Yes 44 94.96 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46389727 + NM_001105540 DGKZ 1 1.13 2.13 56 3.88 69.47 32 7 Yes 71 0.94 Yes 0 0 No -31 0.92 Yes 39 94.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46390339 + NM_001105540 DGKZ 1 0.07 0.11 8 6.62 75.72 25 4.98 No -2 0.16 No 0 0 No -21 0.68 Yes 49 71.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 46390913 + NM_001105540 DGKZ 1 0.42 0.74 34 6.78 82.46 25 5.1 No 12 0.79 Yes 24 0.97 Yes -24 0.95 Yes 46 97.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46393069 + NM_001105540 DGKZ 1 0.39 0.49 24 7.18 81.89 24 3.9 No 45 1.67 Yes 0 0 No -27 0.78 Yes 46 64.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 46393072 + NM_001105540 DGKZ 1 0.19 0.24 15 3.6 76.42 27 4.09 No 48 1.67 Yes 0 0 No -30 0.76 Yes 40 58.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 46394161 + NM_001105540 DGKZ 1 0.18 0.18 11 -8.88 71.74 25 6.78 Yes 12 2.5 Yes 29 0.9 Yes -24 0.86 Yes 46 90.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46396157 + NM_001105540 DGKZ 1 0.67 1.22 50 3.56 0 25 6.24 Yes 12 1.86 Yes 0 0 No -24 0.91 Yes 46 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46397404 + NM_001105540 DGKZ 1 0.22 0.29 16 -3.91 0 34 6.32 Yes 21 1.32 Yes 0 0 No -33 0.71 Yes 37 74.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46400224 + NM_001105540 DGKZ 1 0.13 0.14 10 9.38 82.23 36 5.29 No 23 1.27 Yes 0 0 No -35 0.68 Yes 35 74.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46400443 + NM_001105540 DGKZ 1 0.54 0.63 32 5.75 84.28 17 4.8 No 4 0.52 No 26 0.6 Yes -16 0.58 No 54 61.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 46400753 + NM_001105540 DGKZ 1 0.1 0.11 7 -10.68 0 24 6.4 Yes 11 2.32 Yes 0 0 No -23 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 46401003 + NM_001105540 DGKZ 1 1.22 1.74 54 -8.96 0 28 5.83 Yes 62 1.5 Yes 27 0.65 Yes -30 0.57 No 62 20.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 46401041 + NM_001105540 DGKZ 1 0.19 0.25 14 -2.94 71.06 26 5 No 53 -2.33 No 0 0 No -25 0.41 No 24 25.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 46401044 + NM_001105540 DGKZ 1 0.31 0.42 23 1.24 75.39 29 5.29 No 56 -2.33 No 0 0 No -32 0.41 No 21 20.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 46401398 + NM_001105540 DGKZ 1 0.42 0.63 32 1.5 74.56 15 5.19 No 29 1.39 Yes 0 0 No -41 0.9 Yes 29 87.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74177727 + NM_001318861 DGUOK 1 0.17 0.19 12 -0.3 72.6 22 5 No 56 0.9 Yes 23 0.39 Yes -22 0.52 No 49 72.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 74177753 + NM_001318861 DGUOK 1 0.19 0.19 10 3.39 75.34 17 5.76 Yes 4 -1.31 No 30 0.37 Yes -30 0.65 No 40 77.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 55321698 - NM_014762 DHCR24 1 0.17 0.49 28 8.53 78.88 33 5.59 Yes 34 0.63 No 0 0 No -32 0.95 Yes 38 96.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 55344993 - NM_014762 DHCR24 1 0.12 0.49 21 13.03 95.65 41 7.28 Yes 28 0.68 No 0 0 No -40 0.89 Yes 30 84.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 55345479 - NM_014762 DHCR24 1 0.29 1.13 42 9.97 92.52 33 6.63 Yes 42 1.03 Yes 0 0 No -32 0.75 Yes 38 83.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71146237 - NM_001360 DHCR7 1 0.2 0.25 12 7.64 86.47 33 6.64 Yes 20 1.11 Yes 32 0.89 Yes -32 0.86 Yes 38 89.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71147020 - NM_001360 DHCR7 1 2.91 3.08 58 5.82 90.02 24 5.38 No 11 0.34 No 23 0.88 Yes -23 0.92 Yes 47 90.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71155166 - NM_001360 DHCR7 1 1.37 1.25 53 0.5 0 79 7.47 Yes 26 0.74 No 23 0.69 Yes -38 0.84 Yes 32 38.54 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 71156021 - NM_001360 DHCR7 1 0.11 0.18 10 -7.51 0 19 3.33 No 11 -2.33 No 22 0.9 Yes -18 0.5 No 57 34.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 71158773 - NM_001360 DHCR7 1 0.24 0.18 7 -3.38 0 16 2.91 No 60 0.76 No 23 0.91 Yes -31 0.85 Yes 39 91.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 26761333 + NM_001243565 DHDDS 1 0.13 0.17 9 8.95 85.86 24 7.42 Yes 11 1.54 Yes 0 0 No -23 0.94 Yes 47 94.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26763097 + NM_001243565 DHDDS 1 0.11 0.15 10 5.61 85.02 18 7 Yes 5 1.83 Yes 0 0 No -17 0.5 No 53 79.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 26764662 + NM_001243565 DHDDS 1 0.55 0.75 38 2.43 0 29 6.16 Yes 16 0.71 No 0 0 No -28 0.83 Yes 42 83.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 26769198 + NM_001243565 DHDDS 1 4.59 3.53 69 7.05 77.6 33 6.91 Yes 44 0.8 Yes 32 0.81 Yes -32 0.85 Yes 38 73.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 26774846 + NM_001243565 DHDDS 1 0.62 0.5 29 5.1 92.4 17 5.29 No 4 1.06 Yes 21 0.54 Yes -21 0.58 No 54 72.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 79925779 - NR_110936 DHFR 1 0.44 0.67 35 4.17 78.81 23 6.67 Yes 64 1.82 Yes 0 0 No -22 0.72 Yes 48 76.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 79928122 - NR_110936 DHFR 1 1.28 1.99 57 7.69 92.99 21 7.21 Yes 8 0.48 No 0 0 No -25 0.54 No 42 42.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 72049582 + NM_001361 DHODH 1 1.96 0.92 35 10.18 86.46 21 5.32 No 8 0.94 Yes 24 0.74 Yes -20 0.55 No 50 60.54 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 72054612 + NM_001361 DHODH 1 1.13 0.22 13 2.67 71.78 33 6.68 Yes 20 0.27 No 0 0 No -32 0.58 No 28 56.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 12786764 - NM_013406 DHPS 1 0.28 0.33 18 2.93 79.66 26 5.62 Yes 58 -4.75 No 25 0.62 Yes -25 0.67 Yes 45 46.48 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 12788191 - NM_013406 DHPS 1 0.97 1.94 56 3.61 70.98 17 5.39 No 42 0.84 Yes 22 0.59 Yes -48 0.45 No 48 52.73 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 12789254 - NM_013406 DHPS 1 0.05 0.1 7 6.28 92.64 15 3.92 No 31 1.18 Yes 0 0 No -26 0.36 No 44 54.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24761908 - NM_001136050 DHRS1 1 2.41 0.64 26 9.84 88.66 23 5.99 Yes 10 0.83 Yes 22 0.94 Yes -22 0.97 Yes 48 97.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 34951456 + NM_024308 DHRS11 1 1.4 0.19 11 7.29 87.97 38 5.26 No 66 -3.74 No 25 0.6 Yes -24 0.75 Yes 45 43.65 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 34952354 + NM_024308 DHRS11 1 1 0.18 8 2.19 77.5 16 4.7 No 28 0.48 No 0 0 No -22 0.92 Yes 48 87.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 34953256 + NM_024308 DHRS11 1 2.17 0.42 22 6.39 77.97 48 7.81 Yes 35 0.32 No 25 0.5 Yes -47 0.67 Yes 23 74.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 34953259 + NM_024308 DHRS11 1 4.21 0.69 33 1.2 69.68 51 7.99 Yes 38 0.32 No 0 0 No -50 0.72 Yes 20 72.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 52347170 - NM_001270424 DHRS12 1 2.74 0.44 23 6.93 73.82 31 5.92 Yes 30 0.71 No 30 0.86 Yes -30 0.95 Yes 40 97.66 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 52350659 - NM_001270424 DHRS12 1 1.75 0.29 15 2.98 83.8 24 6.22 Yes 11 0.73 No 0 0 No -20 0.64 No 47 63.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 52350662 - NM_001270424 DHRS12 1 3.3 0.56 32 4.38 76.16 21 5.98 Yes 8 0.75 No 20 0.82 Yes -20 0.58 No 50 54.96 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 52351490 - NM_001270424 DHRS12 1 3.17 0.42 21 8.32 79.64 27 5.99 Yes NA NA NA 0 0 No -32 0.79 Yes 38 84.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 52351578 - NM_001270424 DHRS12 1 0.79 0.14 8 8.01 90.01 31 6.6 Yes 18 1.24 Yes 0 0 No -30 0.51 No 40 54.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 52363910 - NM_001270424 DHRS12 1 9.41 1.49 53 8.41 90.82 19 4.9 No 50 0.5 No 0 0 No -25 0.79 Yes 45 86.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 52364216 - NM_001270424 DHRS12 1 1.24 0.21 13 1.33 72.96 22 4.68 No 29 -3.85 No 22 0.76 Yes -22 0.55 No 48 46.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 24436599 + NM_021004 DHRS4 1 0.44 0.1 7 8.95 86.84 27 5.29 No 17 0.31 No 29 0.53 Yes -27 0.59 No 41 63.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 24468904 + NM_198083 DHRS4L2 1 8.78 1.04 43 10.42 91.42 22 4.66 No 9 0.86 Yes 0 0 No -21 0.69 Yes 44 64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 60612386 - NM_001322280 DHRS7 1 0.2 0.42 24 2.26 0 33 6.74 Yes 20 0.84 Yes 0 0 No -39 0.83 Yes 31 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 60613946 - NM_001322280 DHRS7 1 0.07 0.13 8 3.68 0 33 6.04 Yes 24 0.86 Yes 0 0 No -32 0.52 No 38 52.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 60616280 - NM_001322280 DHRS7 1 0.05 0.14 8 0 0 10 4 No 6 0.95 Yes 0 0 No -30 0.53 No 40 62.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12123489 + NM_018706 DHTKD1 1 0.28 0.15 10 4 80.48 26 5.02 No 42 1.25 Yes 26 0.76 Yes -21 0.32 No 49 66.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 12133992 + NM_018706 DHTKD1 1 1.15 0.97 41 12.22 88.27 24 8.19 Yes 11 1.54 Yes 0 0 No -23 0.93 Yes 47 92.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12137064 + NM_018706 DHTKD1 1 0.17 0.21 13 4.46 88.1 32 6.03 Yes 51 -2.39 No 0 0 No -31 0.65 No 39 52.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 12146894 + NM_018706 DHTKD1 1 0.19 0.21 14 12.44 92.63 30 4.54 No 28 0.35 No 0 0 No -26 0.57 No 44 53.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 12147781 + NM_018706 DHTKD1 1 0.18 0.18 12 -1.73 66.5 56 8.28 Yes 66 1.87 Yes 0 0 No -24 0.75 Yes 15 66.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 12148218 + NM_018706 DHTKD1 1 0.1 0.1 7 7.29 76.17 29 5.89 Yes -4 0.64 No 34 0.63 Yes -22 0.56 No 42 47.02 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 12165225 + NM_018706 DHTKD1 1 0.38 0.36 19 11.01 98.16 29 5.71 Yes 3 0.1 No 0 0 No -23 0.25 No 47 53.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 24534615 - NM_001358 DHX15 1 0.07 0.32 18 7.65 80 25 5.1 No -2 0.91 Yes 28 0.37 Yes -24 0.91 Yes 46 83.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 24534615 - NM_001358 DHX15 1 0.1 0.42 21 7.65 80 25 5.1 No -2 0.91 Yes 28 0.37 Yes -24 0.91 Yes 46 83.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 24538789 - NM_001358 DHX15 1 1.08 5.5 72 1.35 0 11 4.12 No 40 0.5 No 0 0 No -20 0.44 No 51 65.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 24538976 - NM_001358 DHX15 1 0.1 0.49 28 9.55 90.85 20 5.74 Yes 56 0.99 Yes 0 0 No -26 0.68 Yes 44 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 24544646 - NM_001358 DHX15 1 0.03 0.18 10 -1.26 0 64 8.06 Yes 39 0.67 No 0 0 No -34 0.32 No 36 59.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 24550541 - NM_001358 DHX15 1 0.05 0.4 21 2.9 80.85 42 6.81 Yes 29 0.77 Yes 0 0 No -30 0.59 No 40 77.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 24556560 - NM_001358 DHX15 1 0.04 0.19 13 0.07 0 10 4 No 14 0.53 No 0 0 No -31 0.45 No 39 62.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 24578298 - NM_001358 DHX15 1 0.05 0.21 12 -1.71 0 20 4.78 No 7 0.92 Yes 0 0 No -26 0.77 Yes 44 68.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 24582566 - NM_001358 DHX15 1 0.12 0.54 30 6.96 77.95 28 6.07 Yes 15 0.77 Yes 27 0.84 Yes -32 0.58 No 38 55.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 54557273 - NM_001345965 DHX29 1 0.35 0.28 16 5 80.87 17 4.27 No 1 1.76 Yes 0 0 No -21 0.53 No 48 49.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 54559405 - NM_001345965 DHX29 1 0.17 0.13 7 9.82 83.73 35 6 Yes 64 0.07 No 0 0 No -34 0.61 No 41 89.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 54566334 - NM_001345965 DHX29 1 1.33 0.89 39 2.6 67.38 25 4.52 No 36 -2.82 No 24 0.71 Yes -24 0.8 Yes 46 79.31 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 54569204 - NM_001345965 DHX29 1 0.16 0.13 8 -13.04 0 26 5.12 No 4 0.29 No 0 0 No -25 0.79 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 54569255 - NM_001345965 DHX29 1 2.01 1.64 56 7.6 90.23 21 6.99 Yes 74 0.57 No 25 0.63 Yes -29 0.87 Yes 41 68.79 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 54589995 - NM_001345965 DHX29 1 0.44 0.4 19 9.24 91.93 43 5.53 No 3 1.79 Yes 23 0.79 Yes -28 0.9 Yes 42 92.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 54591369 - NM_001345965 DHX29 1 0.53 0.63 27 1.41 0 52 8.39 Yes 39 0.53 No 23 0.94 Yes -25 0.39 No 38 32.4 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 47851636 + NM_001330990 DHX30 1 0.25 0.15 8 7.49 80.71 16 4.99 No 38 0.52 No 0 0 No -19 0.44 No 51 74.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 47852062 + NM_001330990 DHX30 1 1.85 1.17 41 8.83 82.25 32 5.88 Yes 10 0.18 No 0 0 No -31 0.74 Yes 39 61.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 47866256 + NM_001330990 DHX30 1 6.39 1.15 42 8.19 83.5 29 5.38 No 45 1.64 Yes 28 0.8 Yes -28 0.81 Yes 42 74.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 47868888 + NM_001330990 DHX30 1 0.97 0.17 10 5.86 79.84 17 3.64 No 64 1.71 Yes 0 0 No -24 0.47 No 48 67.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47872269 + NM_001330990 DHX30 1 0.09 0.13 8 7.86 86.16 22 7.21 Yes 9 1.75 Yes 21 0.84 Yes -21 0.92 Yes 49 93.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 47882455 + NM_001330990 DHX30 1 0.14 0.28 11 7.97 79 26 6.08 Yes 13 1.47 Yes 0 0 No -25 0.68 Yes 41 65.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47883017 + NM_001330990 DHX30 1 0.29 0.58 31 8.03 81.46 33 7.98 Yes 20 0.75 No 0 0 No -32 0.93 Yes 38 84.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47883022 + NM_001330990 DHX30 1 0.1 0.22 14 -0.96 0 38 8.29 Yes 25 0.73 No 0 0 No -37 0.92 Yes 33 80.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47888615 + NM_001330990 DHX30 1 0.09 0.14 10 7.57 77.98 22 5.29 No 18 0.61 No 0 0 No -25 0.54 No 49 67.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47889216 + NM_001330990 DHX30 1 0.09 0.11 8 6.62 83.79 57 5.14 No 60 0.23 No 0 0 No -27 0.37 No 29 38.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 5357297 - NM_020162 DHX33 1 0.14 0.13 9 2.56 0 27 6.27 Yes 14 1.48 Yes 0 0 No -26 0.9 Yes 44 93.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47876017 + NM_014681 DHX34 1 0.32 0.1 7 4.23 75.17 21 5.92 Yes 8 1.17 Yes 28 0.47 Yes -20 0.73 Yes 50 90.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 47879062 + NM_014681 DHX34 1 0.74 0.18 11 9.2 92.14 29 5.92 Yes 52 -0.42 No 0 0 No -21 0.65 No 49 74.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 47884462 + NM_014681 DHX34 1 0.63 0.29 17 -2.65 0 17 4.36 No 26 -0.79 No 0 0 No -16 0.59 No 54 66.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 37601229 + NR_033905 DHX35 1 0.62 0.17 12 3.89 78.55 26 3.95 No -1 -1.82 No 0 0 No -25 0.74 Yes 45 76.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 37610985 + NR_033905 DHX35 1 0.45 0.17 9 7.64 82.36 25 5 No 50 1.66 Yes 0 0 No -24 0.88 Yes 46 73.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37611593 + NR_033905 DHX35 1 1 0.31 18 3.36 0 32 6.83 Yes 20 0.34 No 0 0 No -32 0.54 No 38 79.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 37617455 + NR_033905 DHX35 1 695.92 22.63 72 9.59 83.43 17 5.37 No 30 1.01 Yes 22 0.84 Yes -22 0.89 Yes 48 75.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 37638902 + NR_033905 DHX35 1 6.34 1.72 55 6.65 74.96 35 6.14 Yes 22 -1.68 No 26 0.49 Yes -29 0.55 No 41 78.57 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr20 37639154 + NR_033905 DHX35 1 3.37 0.68 33 11.15 92.78 26 6.48 Yes 36 -1.57 No 0 0 No -30 0.49 No 45 78.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 37667121 + NR_033905 DHX35 1 0.61 0.22 12 2.73 62.14 44 6.5 Yes 54 -1.2 No 22 0.49 Yes -36 0.81 Yes 34 78.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 153996581 - NM_020865 DHX36 1 0.08 0.13 9 4.18 73.01 25 4.47 No 73 0.46 No 0 0 No -24 0.87 Yes 46 74.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 154013087 - NM_020865 DHX36 1 0.26 0.49 27 4.49 76.33 51 6.22 Yes -2 1.04 Yes 31 0.63 Yes -31 0.73 Yes 39 69.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 154022280 - NM_020865 DHX36 1 0.19 0.22 14 7.5 88.43 47 7.53 Yes 26 0.65 No 0 0 No -41 0.46 No 29 42.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 125433268 - NM_032656 DHX37 1 0.19 0.17 11 6.13 93.18 28 5.29 No 59 0.39 No 0 0 No -27 0.78 Yes 43 70.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 125437517 - NM_032656 DHX37 1 0.35 0.39 23 5.42 91.36 16 5.04 No 3 0.94 Yes 0 0 No -19 0.87 Yes 51 79.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 125448739 - NM_032656 DHX37 1 0.14 0.17 11 4.74 84.41 32 6.78 Yes 19 1.85 Yes 0 0 No -31 0.95 Yes 39 97.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 125462034 - NM_032656 DHX37 1 0.14 0.18 9 -6.45 79.08 21 5.8 Yes 8 2.03 Yes 0 0 No -27 0.5 No 43 77.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 125465403 - NM_032656 DHX37 1 0.13 0.25 10 2.61 74.58 24 5.48 No 24 0.81 Yes 21 0.81 Yes -23 0.91 Yes 47 77.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 72130039 + NM_014003 DHX38 1 0.52 0.47 27 -2.81 74.85 24 6.08 Yes 59 1.06 Yes 0 0 No -24 0.44 No 41 64.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 72131512 + NM_014003 DHX38 1 0.24 0.25 17 8.55 86.88 26 5 No 13 0.14 No 0 0 No -25 0.83 Yes 45 87.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 72132549 + NM_014003 DHX38 1 0.1 0.11 7 -2.39 0 9 3.87 No 33 0.06 No 0 0 No -45 0.7 Yes 25 84.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 72133106 + NM_014003 DHX38 1 0.1 0.14 10 -1.11 0 28 6.86 Yes 15 2.3 Yes 0 0 No -27 0.91 Yes 43 92.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 72136977 + NM_014003 DHX38 1 0.24 0.43 25 1.23 0 26 5.66 Yes 48 -2.78 No 22 0.49 Yes -25 0.94 Yes 45 86.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 72137502 + NM_014003 DHX38 1 0.1 0.11 8 -3.44 78.15 32 5.9 Yes 19 0.92 Yes 0 0 No -31 0.87 Yes 39 90.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 72139882 + NM_014003 DHX38 1 0.15 0.24 16 6.62 83.36 18 6.78 Yes 5 1.82 Yes 23 0.87 Yes -30 0.79 Yes 42 41.99 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 72144941 + NM_014003 DHX38 1 0.21 0.21 13 -4.22 0 14 4.47 No NA NA NA 23 0.54 Yes -20 0.31 No 57 37.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 57643469 + NM_001166301 DHX40 1 1.03 0.39 20 2.65 68.28 56 7.69 Yes 43 1.12 Yes 0 0 No -55 0.78 Yes 15 89.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 39025597 - NM_198963 DHX57 1 0.88 0.5 24 3.65 77.38 20 4.98 No 29 1.87 Yes 21 0.81 Yes -41 0.43 No 29 24.13 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 39038869 - NM_198963 DHX57 1 0.39 0.28 16 10.48 91.6 45 6.58 Yes 39 0.44 No 0 0 No -44 0.52 No 48 41.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 39043328 - NM_198963 DHX57 1 0.56 0.29 15 7.93 80.39 17 4.68 No 4 1.04 Yes 24 0.64 Yes -20 0.58 No 50 55.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 39046125 - NM_198963 DHX57 1 0.21 0.1 7 -10.69 0 19 4.24 No 38 0.47 No 24 0.84 Yes -11 0.39 No 20 54.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 39053796 - NM_198963 DHX57 1 0.38 0.19 8 5.04 86.55 26 6.56 Yes 13 1.44 Yes 0 0 No -25 0.92 Yes 45 92.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 39089473 - NM_198963 DHX57 1 0.58 0.32 20 -1.37 72.3 30 5.81 Yes 52 1.02 Yes 0 0 No -29 0.81 Yes 41 84.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40254310 - NM_024119 DHX58 1 6.48 0.4 24 4.77 85.97 17 5.34 No 65 -2.16 No 0 0 No -23 0.53 No 47 55.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40254310 - NM_024119 DHX58 1 1.65 0.15 9 4.77 85.97 17 5.34 No 65 -2.16 No 0 0 No -23 0.53 No 47 55.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40255866 - NM_024119 DHX58 1 1.27 0.14 9 5.47 84.22 35 5.99 Yes 22 0.67 No 0 0 No -29 0.93 Yes 41 91.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41568538 + NM_001322217 DHX8 1 0.14 0.18 10 -6.25 0 14 3.87 No 22 1.48 Yes 25 0.45 Yes -34 0.5 No 16 59.16 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 41570029 + NM_001322217 DHX8 1 0.58 0.67 30 10.14 95.65 29 6.32 Yes 16 -0.51 No 24 0.88 Yes -27 0.52 No 44 47.73 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 41570054 + NM_001322217 DHX8 1 5.62 5.94 71 -1.79 0 16 3.87 No 3 0.46 No 0 0 No -30 0.61 No 40 73.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41570791 + NM_001322217 DHX8 1 0.2 0.13 9 7.4 80.03 47 6.93 Yes 62 0.11 No 23 0.74 Yes -25 0.17 No 51 42.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 41570816 + NM_001322217 DHX8 1 0.19 0.14 9 -2.13 0 28 5.83 Yes 69 -2.88 No 0 0 No -27 0.54 No 45 72.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41585180 + NM_001322217 DHX8 1 0.19 0.18 12 2.39 0 19 5.42 No 15 0.41 No 0 0 No -21 0.42 No 49 46.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41595167 + NM_001322217 DHX8 1 0.13 0.13 7 9.34 86.14 24 5.98 Yes 11 1.39 Yes 0 0 No -29 0.83 Yes 41 90.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41595199 + NM_001322217 DHX8 1 0.54 0.53 24 8.09 95.04 24 5.14 No 43 1.38 Yes 0 0 No -23 0.73 Yes 47 71.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41598226 + NM_001322217 DHX8 1 0.41 0.28 16 8.65 84.76 28 6.71 Yes 15 0.19 No 0 0 No -27 0.81 Yes 43 94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 182811687 + NR_033302 DHX9 1 0.04 0.15 10 -2.84 0 11 4.12 No 12 1.68 Yes 0 0 No -28 0.91 Yes 42 75.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 182812434 + NR_033302 DHX9 1 0.07 0.36 18 1.91 0 10 3.81 No 34 0.51 No 0 0 No -29 0.93 Yes 41 95.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 182822442 + NR_033302 DHX9 1 0.03 0.13 8 -11.86 0 31 5.36 No 58 0.41 No 0 0 No -30 0.92 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 182825669 + NR_033302 DHX9 1 0.63 0.15 9 -10.97 68.9 44 5.27 No 16 2.12 Yes 0 0 No -28 0.81 Yes 42 85.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 182835583 + NR_033302 DHX9 1 0.06 0.26 18 3.2 0 29 5.96 Yes 20 0.97 Yes 0 0 No -32 0.7 Yes 38 72.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 182845585 + NR_033302 DHX9 1 0.02 0.17 8 -5.06 0 27 6.4 Yes 14 1.58 Yes 0 0 No -26 0.88 Yes 44 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 182847131 + NR_033302 DHX9 1 0.03 0.15 10 -3.62 0 9 3.87 No 30 -2.73 No 26 0.89 Yes -31 0.44 No 46 27.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 182849633 + NR_033302 DHX9 1 0.07 0.5 25 -9.23 69.43 25 5.2 No 54 1.23 Yes 0 0 No -24 0.94 Yes 46 93.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 182850368 + NR_033302 DHX9 1 0.03 0.21 12 1.19 65.4 29 5.85 Yes 69 -5.21 No 20 0.86 Yes -28 0.65 No 52 39.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 122694406 - NM_019887 DIABLO 1 1.77 3.25 67 6.02 77.4 28 5.75 Yes 43 0.04 No 27 0.7 Yes -27 0.38 No 43 64.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 122701129 - NM_019887 DIABLO 1 0.07 0.15 11 -10.23 0 28 5.74 Yes 66 1.16 Yes 0 0 No -27 0.47 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 122701153 - NM_019887 DIABLO 1 0.07 0.17 10 5.21 72.72 14 5.38 No 42 1.16 Yes 0 0 No -20 0.37 No 50 44.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 122702855 - NM_019887 DIABLO 1 0.08 0.11 7 10.73 88.94 31 5.57 Yes 18 1.22 Yes 0 0 No -30 0.59 No 40 73.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 122705175 - NM_019887 DIABLO 1 0.1 0.17 11 6.4 89.08 27 4.92 No 58 1.38 Yes 0 0 No -26 0.72 Yes 44 36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 122709296 - NM_019887 DIABLO 1 12.64 12.69 72 10.44 77.92 24 5.48 No 11 1.28 Yes 23 0.92 Yes -23 0.87 Yes 47 91.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 140903795 - NM_001079812 DIAPH1 1 0.04 0.11 8 -10.66 77.29 38 5.35 No 17 0.68 No 0 0 No -29 0.89 Yes 41 92.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 140905737 - NM_001079812 DIAPH1 1 0.08 0.33 19 -4.11 0 36 6.22 Yes 69 1.32 Yes 25 0.55 Yes -35 0.52 No 35 55.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 140907264 - NM_001079812 DIAPH1 1 0.03 0.1 7 -6.77 0 31 7.54 Yes 38 0.89 Yes 0 0 No -30 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 140956399 - NM_001079812 DIAPH1 1 0.06 0.18 11 3.64 79.76 22 4.29 No 51 1.6 Yes 0 0 No -21 0.92 Yes 49 91.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 140957168 - NM_001079812 DIAPH1 1 0.12 0.33 18 -15.91 0 12 4.24 No -1 0.41 No 20 0.89 Yes -41 0.29 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 140961600 - NM_001079812 DIAPH1 1 0.03 0.11 7 3.46 84.95 27 5.2 No 60 1.53 Yes 0 0 No -26 0.5 No 17 9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 140961624 - NM_001079812 DIAPH1 1 0.12 0.33 18 4.74 84.41 49 7.79 Yes 60 1.81 Yes 0 0 No -48 0.8 Yes 22 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 140967818 - NM_001079812 DIAPH1 1 7.24 9.83 72 9.6 80.53 42 8.25 Yes 29 2.06 Yes 41 0.61 Yes -45 0.65 No 25 87.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 140973836 - NM_001079812 DIAPH1 1 0.09 0.11 7 8.6 93.63 27 4.98 No 56 0.75 No 0 0 No -29 0.32 No 41 34.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 96004821 + NM_007309 DIAPH2 1 0.25 0.11 8 7.32 81.75 48 6.35 Yes 21 1.51 Yes 0 0 No -27 0.77 Yes 43 79.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 96013155 + NM_007309 DIAPH2 1 0.35 0.17 7 -8.32 75.14 21 5.56 Yes 54 1.26 Yes 0 0 No -26 0.47 No 44 85.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 96191372 + NM_007309 DIAPH2 1 0.79 0.28 15 8.62 82.27 30 4.49 No 22 0.07 No 0 0 No -34 0.49 No 47 48.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 96197056 + NM_007309 DIAPH2 1 0.86 0.25 14 4.99 80.04 22 4.84 No 52 0.61 No 0 0 No -21 0.74 Yes 49 70.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 96233743 + NM_007309 DIAPH2 1 0.45 0.21 13 9.05 92.39 28 5.5 No 4 0.99 Yes 0 0 No -27 0.57 No 43 74.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 96300550 + NM_007309 DIAPH2 1 0.79 0.29 16 8.07 94 21 5.83 Yes 8 1.85 Yes 0 0 No -20 0.79 Yes 50 78.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 96717106 + NM_007309 DIAPH2 1 0.65 0.1 7 7.98 86.89 23 9.72 Yes 10 0.86 Yes 0 0 No -22 0.79 Yes 48 85.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 60253626 - NM_001042517 DIAPH3 1 1 0.39 19 7.29 77.48 27 5.74 Yes 51 1.53 Yes 0 0 No -32 0.54 No 44 63.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 60316688 - NM_001042517 DIAPH3 1 0.66 0.25 14 6.91 89.34 187 14 Yes NA NA NA 0 0 No -58 0.16 No 29 15.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 60316691 - NM_001042517 DIAPH3 1 1.05 0.46 15 10.14 85.53 184 14 Yes NA NA NA 0 0 No -34 0.11 No 32 16.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 60413574 - NM_001042517 DIAPH3 1 1.18 0.9 35 3.98 0 12 4.24 No 53 1.15 Yes 0 0 No -26 0.54 No 45 64.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 60455581 - NM_001042517 DIAPH3 1 0.46 0.15 9 3.57 72.45 32 6.12 Yes 7 0.49 No 0 0 No -31 0.55 No 39 61.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 60462502 - NM_001042517 DIAPH3 1 0.35 0.1 7 6.16 90.47 18 9.33 Yes 5 0.73 No 0 0 No -26 0.36 No 45 37.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 60483921 - NM_001042517 DIAPH3 1 0.59 0.18 11 9.26 91.98 21 5.86 Yes 8 1.02 Yes 0 0 No -20 0.58 No 50 86.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 60488083 - NM_001042517 DIAPH3 1 1.66 0.76 35 2.47 0 41 6.76 Yes 28 1.18 Yes 0 0 No -34 0.55 No 36 69.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 60501570 - NM_001042517 DIAPH3 1 1.05 0.58 25 4.17 89.16 29 5.57 Yes 63 -4.82 No 0 0 No -26 0.55 No 42 45.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 60503085 - NM_001042517 DIAPH3 1 0.67 0.4 18 6.83 77.28 27 5.25 No 73 0.49 No 0 0 No -26 0.94 Yes 44 93.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 60539669 - NM_001042517 DIAPH3 1 1.22 0.71 32 10.3 94.37 35 8.96 Yes 19 1.51 Yes 0 0 No -34 0.8 Yes 36 81.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 60542034 - NM_001042517 DIAPH3 1 0.31 0.19 11 7.44 89.79 31 7.78 Yes 42 0.69 No 0 0 No -30 0.78 Yes 40 84.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 60566714 - NM_001042517 DIAPH3 1 0.18 0.11 7 -1.15 0 24 6.32 Yes 11 1.54 Yes 0 0 No -23 0.95 Yes 47 93.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 60667863 - NM_001042517 DIAPH3 1 0.29 0.18 11 -1.03 0 34 5.06 No 70 0.63 No 0 0 No -33 0.73 Yes 37 73.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 60677049 - NM_001042517 DIAPH3 1 0.2 0.19 9 -0.12 0 9 3.87 No 47 1.57 Yes 0 0 No -30 0.68 Yes 40 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 60677055 - NM_001042517 DIAPH3 1 0.43 0.35 21 2.36 69.79 25 4.97 No 41 1.58 Yes 0 0 No -24 0.72 Yes 46 84.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 60685465 - NM_001042517 DIAPH3 1 0.17 0.13 8 7.96 81.64 23 6 Yes 10 1.79 Yes 0 0 No -22 0.5 No 48 80.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 95557442 - NM_001291628 DICER1 1 0.07 0.1 7 -4.58 0 32 6.8 Yes 19 0.39 No 0 0 No -31 0.81 Yes 39 77.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 95557454 - NM_001291628 DICER1 1 0.23 0.32 19 -0.22 0 20 5.91 Yes 7 0.44 No 26 0.82 Yes -19 0.74 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 95557698 - NM_001291628 DICER1 1 0.28 0.32 14 1.51 0 32 4.71 No 19 0.53 No 30 0.61 Yes -31 0.94 Yes 39 97.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 95558931 - NM_001291628 DICER1 1 0.25 0.28 12 7.01 82.39 40 5.19 No 45 1.74 Yes 0 0 No -40 0.72 Yes 30 82.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95570387 - NM_001291628 DICER1 1 1.05 1.15 44 5.59 84.09 40 5 No 0 2.06 Yes 25 0.77 Yes -25 0.7 Yes 45 89.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 95582918 - NM_001291628 DICER1 1 0.37 0.6 30 8.79 84.53 38 5.24 No 0 0.26 No 31 0.66 Yes -31 0.85 Yes 39 80.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 95583025 - NM_001291628 DICER1 1 0.16 0.25 14 1.86 0 11 4.12 No 60 1.33 Yes 0 0 No -42 0.94 Yes 28 96.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95585591 - NM_001291628 DICER1 1 0.27 0.29 14 6.29 76.97 25 6.66 Yes 12 1.48 Yes 0 0 No -24 0.95 Yes 46 91.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95586111 - NM_001291628 DICER1 1 0.11 0.15 9 5.62 80.87 27 7.46 Yes 58 0.83 Yes 0 0 No -26 0.88 Yes 44 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95595894 - NM_001291628 DICER1 1 0.09 0.11 7 -1.57 65.52 35 9.22 Yes 22 1.96 Yes 0 0 No -34 0.69 Yes 36 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95595988 - NM_001291628 DICER1 1 0.78 0.99 46 0.95 82.99 17 4.69 No 52 0.27 No 26 0.85 Yes -22 0.33 No 48 39.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 95596016 - NM_001291628 DICER1 1 0.13 0.18 12 7.83 80.49 27 5.85 Yes 24 0.29 No 0 0 No -26 0.71 Yes 44 78.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 61522043 - NM_001193369 DIDO1 1 1.2 0.78 34 6.87 84.87 14 4.85 No 1 0.86 Yes 0 0 No -22 0.74 Yes 48 70.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61522431 - NM_001193369 DIDO1 1 0.28 0.19 13 7.46 85.5 26 6.4 Yes 53 1.5 Yes 0 0 No -23 0.78 Yes 47 76.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61537449 - NM_001193369 DIDO1 1 0.42 0.63 29 2.77 0 57 5.45 No 29 1.15 Yes 0 0 No -32 0.44 No 29 74.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 61540511 - NM_001193369 DIDO1 1 2.53 3.29 68 9.47 92.19 32 6.69 Yes 19 0.85 Yes 0 0 No -31 0.92 Yes 39 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61544806 - NM_001193369 DIDO1 1 0.1 0.13 7 2.68 81.75 35 6.16 Yes 46 0.73 No 0 0 No -31 0.52 No 39 61.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 210003461 + NM_014388 DIEXF 1 0.5 0.24 14 0.94 0 12 4.24 No 57 1.31 Yes 0 0 No -30 0.74 Yes 40 81.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 210016910 + NM_014388 DIEXF 1 0.3 0.15 11 1.05 65.61 52 6.38 Yes 39 1.66 Yes 0 0 No -51 0.47 No 19 71.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 210018559 + NM_014388 DIEXF 1 0.21 0.1 7 6.89 95.29 21 5.26 No 4 0.38 No 0 0 No -20 0.83 Yes 50 80.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 61687834 - NM_014473 DIMT1 1 0.89 1.6 54 7.35 84.03 32 5.89 Yes 49 -4 No 31 0.64 Yes -28 0.39 No 42 61.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 61687834 - NM_014473 DIMT1 1 0.08 0.15 10 7.35 84.03 32 5.89 Yes 49 -4 No 31 0.64 Yes -28 0.39 No 42 61.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 61688086 - NM_014473 DIMT1 1 0.16 0.26 16 1.41 62.41 19 3.84 No 12 0.44 No 28 0.87 Yes -24 0.43 No 46 38.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 47914041 + NM_001146116 DIP2A 1 6.7 1.75 51 3.71 78.27 23 5.35 No 33 0.54 No 0 0 No -22 0.78 Yes 48 78.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47924270 + NM_001146116 DIP2A 1 5.75 0.99 46 3.07 74.43 36 5.9 Yes 39 0.69 No 23 0.73 Yes -35 0.43 No 34 75.61 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr21 47929127 + NM_001146116 DIP2A 1 0.59 0.15 10 9.55 84.42 52 7.64 Yes 39 1.09 Yes 27 0.87 Yes -22 0.91 Yes 48 95.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 47934579 + NM_001146116 DIP2A 1 0.7 0.25 12 -0.88 0 61 8.08 Yes 48 1.21 Yes 0 0 No -61 0.5 No 10 56.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 47976315 + NM_001146116 DIP2A 1 10.66 1.57 53 4.83 85.27 17 4.24 No -1 0.05 No 24 0.88 Yes -24 0.56 No 46 50.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 47982667 + NM_001146116 DIP2A 1 8.41 1.39 51 8.35 81.5 32 5.92 Yes 53 -1.71 No 0 0 No -31 0.71 Yes 39 64.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 47983747 + NM_001146116 DIP2A 1 0.83 0.19 10 5.21 85.07 18 4.17 No 5 0.45 No 28 0.65 Yes -33 0.43 No 37 52.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 51019942 + NM_173602 DIP2B 1 0.15 0.18 11 11.21 88.47 53 7.48 Yes 40 0.89 Yes 0 0 No -52 0.63 No 18 90.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 51048793 + NM_173602 DIP2B 1 0.93 0.85 37 8.4 84.75 25 6.68 Yes 12 0.83 Yes 24 0.83 Yes -24 0.87 Yes 46 89.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 51078227 + NM_173602 DIP2B 1 0.21 0.14 10 5.58 86.01 15 4.44 No 2 1.26 Yes 0 0 No -20 0.5 No 50 46.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 51102267 + NM_173602 DIP2B 1 0.1 0.11 7 -11.89 69.85 40 6.78 Yes 49 1.53 Yes 0 0 No -39 0.85 Yes 31 88.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122590906 + NM_032839 DIRC2 1 2.77 0.11 8 7.42 76.37 31 5.62 Yes 2 1.73 Yes 0 0 No -24 0.41 No 40 56.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 73335678 - NM_001322349 DIS3 1 0.23 0.44 23 -4.61 54.15 17 4.63 No 48 0.35 No 24 0.77 Yes -53 0.58 No 17 72.96 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr13 73347955 - NM_001322349 DIS3 1 0.18 0.46 25 -5.56 0 48 7.19 Yes 4 1.05 Yes 0 0 No -32 0.24 No 39 37.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 73349482 - NM_001322349 DIS3 1 0.18 0.32 16 2.67 66 30 4.98 No 26 -3.52 No 0 0 No -24 0.94 Yes 46 95.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 66597881 + NM_001323945 DIS3L 1 1.34 0.35 18 5.18 80.48 43 8.38 Yes 30 0.53 No 0 0 No -37 0.45 No 35 39.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 66599099 + NM_001323945 DIS3L 1 0.51 0.14 9 6.61 82.07 46 5.26 No 16 1.1 Yes 28 0.67 Yes -28 0.48 No 42 61.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 66599234 + NM_001323945 DIS3L 1 2.39 0.65 31 3.82 73.29 30 6.74 Yes -1 0.58 No 32 0.69 Yes -24 0.52 No 38 80.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 66604127 + NM_001323945 DIS3L 1 0.55 0.33 15 7.24 86.62 15 5.4 No 2 0.89 Yes 0 0 No -23 0.73 Yes 47 79.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66621950 + NM_001323945 DIS3L 1 1.29 0.56 27 7.44 86.9 25 5.21 No 22 0.24 No 24 0.7 Yes -24 0.71 Yes 49 65.36 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 66624197 + NM_001323945 DIS3L 1 0.35 0.15 9 -9.83 61.48 14 5.16 No 2 -2.03 No 29 0.31 Yes -20 0.34 No 11 23.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 232837274 + NM_001257282 DIS3L2 1 0.28 0.1 7 6.22 83.86 23 5.64 Yes 10 1.84 Yes 0 0 No -28 0.46 No 48 52.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 232870954 + NM_001257282 DIS3L2 1 0.44 0.14 8 7.58 86.14 21 5.68 Yes 45 -1.64 No 0 0 No -23 0.43 No 47 55.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 232901499 + NM_001257282 DIS3L2 1 0.16 0.11 8 8.07 89.4 24 4.9 No 46 1.6 Yes 0 0 No -23 0.91 Yes 47 93.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 232936628 + NM_001257282 DIS3L2 1 0.29 0.18 12 -3.75 83.01 23 5.09 No 67 0.5 No 0 0 No -22 0.84 Yes 48 78.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 232952713 + NM_001257282 DIS3L2 1 0.51 0.29 15 4.42 79.01 23 6.2 Yes 4 1.43 Yes 0 0 No -22 0.87 Yes 48 87.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 232975906 + NM_001257282 DIS3L2 1 0.73 0.49 24 8.82 91.36 28 5.46 No 15 0.93 Yes 27 0.88 Yes -27 0.53 No 43 67.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 232992685 + NM_001257282 DIS3L2 1 0.63 0.39 19 3.22 0 29 4.61 No 76 1.14 Yes 0 0 No -28 0.64 No 47 62.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153994539 + NR_110021 DKC1 1 0.07 0.28 17 -3.71 78.25 18 5.39 No 5 2.34 Yes 0 0 No -29 0.77 Yes 41 69.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153996543 + NR_110021 DKC1 1 0.12 0.44 21 2.26 78.15 24 4.64 No 55 0.9 Yes 23 0.96 Yes -23 0.91 Yes 47 88.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 154005078 + NR_110021 DKC1 1 0.31 0.58 28 3.27 0 23 4.73 No 17 0.93 Yes 0 0 No -29 0.72 Yes 41 80.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 111904462 + NM_001931 DLAT 1 0.06 0.11 8 8.45 91.35 30 4.96 No -3 0.16 No 0 0 No -29 0.76 Yes 41 68.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 111913166 + NM_001931 DLAT 1 0.15 0.26 17 6.79 76.59 28 5.66 Yes 15 0.66 No 0 0 No -27 0.92 Yes 43 94.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 111914195 + NM_001931 DLAT 1 0.17 0.29 18 0.21 0 11 3.87 No 13 0.5 No 0 0 No -37 0.58 No 33 57.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 111924221 + NM_001931 DLAT 1 0.1 0.18 10 5.85 84.46 25 5.2 No 12 0.95 Yes 0 0 No -24 0.88 Yes 46 93.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 107533680 + NM_000108 DLD 1 0.18 0.44 28 4.2 86 25 6.17 Yes 64 0.07 No 0 0 No -24 0.73 Yes 46 66.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 107542200 + NM_000108 DLD 1 0.09 0.26 16 0.26 71.88 16 4.44 No -3 0.92 Yes 0 0 No -46 0.55 No 24 74.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 107542206 + NM_000108 DLD 1 0.07 0.18 11 -0.4 0 16 3.84 No 3 0.54 No 0 0 No -52 0.36 No 18 57.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 107542773 + NM_000108 DLD 1 0.12 0.44 25 1.91 0 24 5.84 Yes 11 0.97 Yes 0 0 No -27 0.38 No 47 46.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 107545307 + NM_000108 DLD 1 0.14 0.6 30 3.91 72.4 18 5.94 Yes 57 1.04 Yes 25 0.63 Yes -31 0.62 No 39 83.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 107545328 + NM_000108 DLD 1 0.02 0.1 7 2.72 78.87 24 3.8 No 26 0.62 No 0 0 No -23 0.61 No 47 52.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 107545426 + NM_000108 DLD 1 0.1 0.43 25 1.27 70.71 19 4.9 No 76 -5.7 No 0 0 No -26 0.55 No 44 70.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 107545791 + NM_000108 DLD 1 0.05 0.22 12 1.85 65.49 59 7.8 Yes 46 0.72 No 20 0.84 Yes -21 0.36 No 32 37.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 107546715 + NM_000108 DLD 1 0.05 0.1 7 3.17 0 30 6.95 Yes 17 0.21 No 25 0.83 Yes -29 0.73 Yes 41 51.42 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 107550312 + NM_000108 DLD 1 0.03 0.11 7 4.74 84.41 31 6.57 Yes 18 1.63 Yes 0 0 No -30 0.87 Yes 40 93.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 107558344 + NM_000108 DLD 1 0.11 0.39 21 -0.97 0 16 4.12 No 23 -1.6 No 30 0.84 Yes -33 0.5 No 27 20.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 50605822 - NR_002612 DLEU2 1 2.19 0.19 12 9.3 87.49 22 4.14 No 0 1.09 Yes 0 0 No -21 0.57 No 49 56.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 50623807 - NR_002612 DLEU2 1 0.18 0.14 9 2.19 0 34 4.96 No 21 0.58 No 27 0.66 Yes -19 0.55 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 50641842 - NR_002612 DLEU2 1 0.18 0.15 9 8.39 82.45 24 5.39 No 11 0.49 No 0 0 No -24 0.78 Yes 46 86.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 50644778 - NR_002612 DLEU2 1 3.07 3.5 62 11.49 85.86 35 8.06 Yes 22 2.51 Yes 34 0.84 Yes -34 0.89 Yes 36 92.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 50645766 - NR_002612 DLEU2 1 0.51 0.61 29 10.01 85.46 30 5.57 Yes 76 0.92 Yes 0 0 No -29 0.64 No 41 83.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 196792310 - NM_001290983 DLG1 1 0.37 0.43 22 -3.9 0 14 4.35 No 28 0.5 No 0 0 No -64 0.27 No 30 25.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 196792336 - NM_001290983 DLG1 1 1.94 2.38 67 1.99 65.58 39 7.61 Yes 74 0.74 No 19 0.52 Yes -38 0.91 Yes 32 90.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 196803554 - NM_001290983 DLG1 1 72.38 22.44 72 6.3 85.26 24 5.83 Yes 75 -2.34 No 0 0 No -37 0.76 Yes 33 75.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196803557 - NM_001290983 DLG1 1 165.74 52.04 72 8.97 88.65 21 5.65 Yes 72 -2.34 No 34 0.24 Yes -34 0.78 Yes 36 73.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 196805405 - NM_001290983 DLG1 1 9.71 2.96 64 3.95 81.38 20 4.9 No 44 1.03 Yes 19 0.86 Yes -19 0.88 Yes 51 84.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 196831895 - NM_001290983 DLG1 1 0.13 0.13 8 6.41 68.74 31 4.85 No 9 1.03 Yes 21 0.3 Yes -30 0.89 Yes 40 87.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 196842896 - NM_001290983 DLG1 1 0.5 0.54 29 6.52 81.33 27 6.16 Yes 66 0.7 No 0 0 No -26 0.93 Yes 44 90.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196846349 - NM_001290983 DLG1 1 0.08 0.11 8 5.69 81.31 25 4.25 No 20 0.84 Yes 0 0 No -24 0.45 No 46 50.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 196853336 - NM_001290983 DLG1 1 0.28 0.39 22 9.26 85.05 31 6.57 Yes 52 0.89 Yes 0 0 No -24 0.64 No 40 51.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 196857850 - NM_001290983 DLG1 1 0.94 1 45 7.86 82.15 24 5.23 No 30 0.36 No 0 0 No -23 0.8 Yes 47 68.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 196867887 - NM_001290983 DLG1 1 0.17 0.17 11 4.09 82.25 32 5.33 No 30 0.29 No 0 0 No -31 0.74 Yes 39 71.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196904475 - NM_001290983 DLG1 1 0.46 0.19 11 7.25 86.14 30 7.06 Yes 2 1.6 Yes 0 0 No -30 0.63 No 41 75.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 196910983 - NM_001290983 DLG1 1 0.61 0.24 16 -6.55 0 13 3.79 No 44 1.49 Yes 0 0 No -56 0.41 No 58 73.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 196958544 - NM_001290983 DLG1 1 0.1 0.14 7 8.21 92.16 25 5.38 No 12 0.73 No 0 0 No -24 0.81 Yes 46 88.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196963319 - NM_001290983 DLG1 1 0.07 0.1 7 11.48 90.76 36 4.51 No 11 0.77 No 0 0 No -23 0.66 No 47 76.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 196997656 - NM_001290983 DLG1 1 0.5 0.69 31 5.08 83.95 35 5.92 Yes 57 0.44 No 0 0 No -30 0.54 No 40 75.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 79565930 - NM_004747 DLG5 1 1.28 0.21 12 8.2 88.76 19 6.56 Yes 40 0.99 Yes 29 0.75 Yes -21 0.69 Yes 41 74.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 79575934 - NM_004747 DLG5 1 6.89 0.67 33 7.81 82.98 25 4.71 No 61 -2.72 No 24 0.74 Yes -24 0.68 Yes 46 75.84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 79579446 - NM_004747 DLG5 1 2.19 0.26 16 9.06 79.41 21 3.81 No 34 -1.6 No 0 0 No -28 0.89 Yes 42 94.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 79597585 - NM_004747 DLG5 1 1.69 0.35 17 5.53 86.7 40 6.31 Yes 63 1.2 Yes 0 0 No -21 0.61 No 38 68.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 79608086 - NM_004747 DLG5 1 3.87 0.47 20 6.75 96.41 26 3.75 No 3 0.45 No 0 0 No -25 0.96 Yes 45 96.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 79614117 - NM_004747 DLG5 1 18.63 2.42 57 -1.02 0 15 4.58 No 74 1.12 Yes 0 0 No -38 0.94 Yes 32 95.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35093667 + NM_183006 DLGAP4 1 9.07 1.99 59 8.35 89.59 29 4.28 No 7 1.05 Yes 28 0.7 Yes -28 0.73 Yes 42 75.86 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 35125849 + NM_183006 DLGAP4 1 0.33 0.24 16 2.53 81.21 19 4.8 No 6 1.52 Yes 18 0.94 Yes -18 0.88 Yes 52 69.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 35127644 + NM_183006 DLGAP4 1 1.2 0.97 40 4.67 69.71 83 9.7 Yes 70 1.28 Yes 33 0.04 Yes -38 0.14 No 32 60.08 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 35128604 + NM_183006 DLGAP4 1 0.81 0.97 42 -3.64 63.74 48 6.55 Yes 35 2 Yes 0 0 No -43 0.73 Yes 23 78.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35154281 + NM_183006 DLGAP4 1 0.14 0.14 9 5.24 75.84 22 6.08 Yes 35 1.61 Yes 0 0 No -21 0.81 Yes 49 84.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35155219 + NM_183006 DLGAP4 1 0.19 0.14 10 -6.48 0 42 7.99 Yes 7 1.36 Yes 0 0 No -41 0.58 No 34 66.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 55615188 - NM_001146015 DLGAP5 1 1.19 0.15 10 4.2 0 28 8.47 Yes 15 1.16 Yes 0 0 No -27 0.73 Yes 43 81.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55615188 - NM_001146015 DLGAP5 1 24.47 2.07 61 4.2 0 28 8.47 Yes 15 1.16 Yes 0 0 No -27 0.73 Yes 43 81.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55615405 - NM_001146015 DLGAP5 1 3.83 0.81 35 1.19 0 27 6.78 Yes 14 0.55 No 28 0.85 Yes -26 0.91 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 55621504 - NM_001146015 DLGAP5 1 1.38 2.61 62 8.71 84.05 31 5.48 No 18 0.67 No 0 0 No -30 0.86 Yes 40 87.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 55625473 - NM_001146015 DLGAP5 1 0.17 0.28 14 1 74.15 23 4.8 No 51 0.61 No 23 0.67 Yes -22 0.82 Yes 48 77.93 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 55629334 - NM_001146015 DLGAP5 1 1.13 1.54 49 4.17 84.41 30 6.88 Yes 29 0.23 No 0 0 No -29 0.76 Yes 41 83.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 55643884 - NM_001146015 DLGAP5 1 0.17 0.26 15 4.78 87.58 18 4.9 No 5 0.05 No 0 0 No -22 0.71 Yes 48 85.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 55646417 - NM_001146015 DLGAP5 1 0.08 0.15 9 -10.35 0 28 4.45 No 36 0.19 No 0 0 No -28 0.34 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 55657144 - NM_001146015 DLGAP5 1 0.15 0.15 10 10.35 80.89 39 6.6 Yes 8 1.42 Yes 0 0 No -30 0.51 No 40 51.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 55657895 - NM_001146015 DLGAP5 1 1.5 1.76 55 2.64 0 17 3.95 No 49 0.6 No 21 0.35 Yes -37 0.58 No 49 40.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 55657905 - NM_001146015 DLGAP5 1 0.13 0.15 9 4.84 73.01 28 5.44 No 39 0.59 No 21 0.35 Yes -27 0.9 Yes 43 83.48 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75355833 + NM_001244883 DLST 1 0.32 0.46 22 9.47 88.6 18 4.9 No 43 1.19 Yes 0 0 No -55 0.28 No 53 68.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75355979 + NM_001244883 DLST 1 1.63 4.33 71 1.79 85.67 31 5.39 No 15 0.54 No 28 0.92 Yes -30 0.84 Yes 40 84.27 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75356580 + NM_001244883 DLST 1 0.39 0.88 38 -5.86 0 17 4.12 No 4 0.81 Yes 18 0.34 Yes -16 0.9 Yes 54 92.01 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 44680977 + NM_019100 DMAP1 1 0.24 0.15 9 10.01 83.8 26 6.58 Yes 13 1.36 Yes 25 0.93 Yes -25 0.45 No 45 74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 44683661 + NM_019100 DMAP1 1 0.23 0.14 9 5.94 86.47 24 5.19 No 11 0.2 No 23 0.87 Yes -23 0.58 No 47 64.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 44684012 + NM_019100 DMAP1 1 2 1.18 50 2.88 77.12 19 4.74 No 57 -0.4 No 23 0.38 Yes -53 0.5 No 47 35.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 44684132 + NM_019100 DMAP1 1 0.74 0.46 22 1.68 68.09 42 7.76 Yes 59 1.9 Yes 0 0 No -41 0.86 Yes 29 87.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 44684135 + NM_019100 DMAP1 1 1.07 0.61 30 -0.83 67.16 45 7.95 Yes 62 1.9 Yes 0 0 No -44 0.83 Yes 26 85.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 44684262 + NM_019100 DMAP1 1 0.81 0.68 37 2.27 72.85 38 8.24 Yes 25 1.62 Yes 0 0 No -30 0.84 Yes 40 82.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 44685432 + NM_019100 DMAP1 1 0.39 0.31 16 5.94 71.42 67 8.79 Yes 54 2.26 Yes 21 0.86 Yes -53 0.56 No 31 75.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 38952414 - NM_007068 DMC1 1 1.87 0.36 20 7.28 83.44 27 8.04 Yes 14 1.54 Yes 0 0 No -26 0.9 Yes 44 92.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38962444 - NM_007068 DMC1 1 6.51 1.6 54 7.4 90.11 18 6.8 Yes 5 1.42 Yes 0 0 No -26 0.34 No 40 76.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 31144787 - NM_004014 DMD 1 0.65 0.14 9 -5.96 0 39 7.86 Yes 26 1.6 Yes 0 0 No -38 0.83 Yes 32 86.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 31164472 - NM_004014 DMD 1 0.53 0.38 20 9.59 86.09 40 7.05 Yes 74 0.85 Yes 0 0 No -31 0.5 No 40 50.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 31213763 - NM_004014 DMD 1 0.4 0.21 12 0.84 66.48 32 13.53 Yes 9 0.03 No 0 0 No -31 0.6 No 39 51.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 31258313 - NM_004014 DMD 1 0.2 0.13 8 8.72 85.87 26 5.1 No 13 1.19 Yes 0 0 No -25 0.93 Yes 45 96.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 31265886 - NM_004014 DMD 1 0.84 0.53 25 5.66 78.1 37 7.72 Yes 38 0.99 Yes 0 0 No -31 0.75 Yes 34 73.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46274319 - NM_001288766 DMPK 1 6.05 0.31 17 12.23 87.96 22 7.4 Yes 9 1.14 Yes 21 0.9 Yes -21 0.73 Yes 49 67.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 46274655 - NM_001288766 DMPK 1 564.22 28.11 72 12 90.43 33 7.39 Yes NA NA NA 23 0.62 Yes -32 0.52 No 47 62.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 46275150 - NM_001288766 DMPK 1 2.12 0.39 24 3.52 79.58 21 5.2 No 45 0.54 No 0 0 No -20 0.79 Yes 50 64.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 46275225 - NM_001288766 DMPK 1 5.64 1.08 46 -0.76 0 18 3.01 No -2 0.21 No 21 0.89 Yes -18 0.27 No 53 52.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 46280818 - NM_001288766 DMPK 1 0.67 0.17 9 -0.01 61.62 37 6.08 Yes 24 0.72 No 0 0 No -36 0.86 Yes 34 39.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 46280982 - NM_001288766 DMPK 1 0.83 0.24 12 4.81 80.86 48 6.65 Yes 35 0.18 No 0 0 No -28 0.58 No 23 40.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46282537 - NM_001288766 DMPK 1 3 0.81 37 8.24 92.08 25 5.2 No 12 0.02 No 0 0 No -24 0.76 Yes 46 67.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 86793569 + NM_021145 DMTF1 1 0.7 0.43 23 6.08 76.12 31 5.59 Yes 7 0.47 No 30 0.83 Yes -30 0.57 No 40 61.75 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 86797272 + NM_021145 DMTF1 1 9.77 4.99 67 7.57 78.21 29 5.82 Yes 76 0.7 No 0 0 No -28 0.63 No 42 75.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 86800255 + NM_021145 DMTF1 1 0.5 0.29 18 5.28 69.34 32 6.34 Yes 16 0.37 No 0 0 No -28 0.86 Yes 42 85.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 86800316 + NM_021145 DMTF1 1 0.3 0.17 12 2.59 0 10 3.87 No 14 0.15 No 0 0 No -26 0.52 No 45 75.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 86802859 + NM_021145 DMTF1 1 0.23 0.15 9 4.11 0 13 4.24 No 59 1.21 Yes 0 0 No -59 0.66 No 11 68.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 86811332 + NM_021145 DMTF1 1 20.12 9.5 72 8.13 88.82 23 4.69 No 52 1.1 Yes 22 0.69 Yes -27 0.49 No 43 71.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 86811371 + NM_021145 DMTF1 1 37.76 17.18 72 11.78 90.5 30 6.4 Yes 33 1.46 Yes 22 0.58 Yes -22 0.76 Yes 40 40.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 86814135 + NM_021145 DMTF1 1 1.04 0.57 32 9.55 85.4 42 5.8 Yes 29 1.27 Yes 41 0.54 Yes -41 0.84 Yes 29 87.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 86817354 + NM_021145 DMTF1 1 3.35 1.65 58 6.79 75.63 55 4.68 No 16 1.43 Yes 28 0.93 Yes -50 0.8 Yes 20 95.01 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 86817573 + NM_021145 DMTF1 1 0.81 0.42 23 4.32 76.1 20 4.69 No 7 0.19 No 0 0 No -19 0.69 Yes 51 71.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 86820239 + NM_021145 DMTF1 1 0.83 0.71 35 3.87 86.8 35 7.39 Yes 5 0.42 No 28 0.94 Yes -34 0.73 Yes 36 74 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 86823044 + NM_021145 DMTF1 1 0.29 0.17 11 0.42 0 28 5.65 Yes 3 0.85 Yes 0 0 No -27 0.76 Yes 43 64.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 46290287 - NM_004943 DMWD 1 0.11 0.11 8 9.95 85.21 27 7.68 Yes 14 1.38 Yes 0 0 No -26 0.53 No 44 68.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 46290477 - NM_004943 DMWD 1 0.29 0.32 18 9.13 87.07 32 8.08 Yes 19 1.83 Yes 31 0.89 Yes -31 0.95 Yes 39 93.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 46293566 - NM_004943 DMWD 1 0.68 0.81 35 10.2 88.85 21 6.89 Yes 24 1.22 Yes 0 0 No -30 0.63 No 40 58.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 118417268 + NM_001290322 DMXL1 1 4.17 2.32 62 5.45 91.79 17 4.66 No 62 0.86 Yes 32 0.06 Yes -16 0.27 No 54 57.23 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 118452737 + NM_001290322 DMXL1 1 1.39 0.9 37 9.07 83.89 47 7.23 Yes 34 0.63 No 0 0 No -21 0.37 No 24 41.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 118453816 + NM_001290322 DMXL1 1 1.87 1.19 44 7.94 86.44 21 5.88 Yes 12 0.6 No 0 0 No -24 0.68 Yes 46 76.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 118456645 + NM_001290322 DMXL1 1 0.16 0.18 12 -6.51 0 17 4 No 73 -5.37 No 25 0.52 Yes -38 0.4 No 32 59.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 118473037 + NM_001290322 DMXL1 1 0.27 0.17 9 9.89 98.54 25 5.91 Yes 12 1.2 Yes 0 0 No -24 0.87 Yes 46 90.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 118506219 + NM_001290322 DMXL1 1 0.41 0.38 20 6.76 75.74 30 5.92 Yes 17 0.32 No 0 0 No -26 0.44 No 37 72.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 118506295 + NM_001290322 DMXL1 1 0.58 0.53 29 5.98 84.41 26 6.19 Yes 13 0.3 No 0 0 No -25 0.88 Yes 45 93.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 118506637 + NM_001290322 DMXL1 1 0.9 0.74 34 1.31 60.14 41 6.48 Yes 28 0.81 Yes 0 0 No -40 0.8 Yes 30 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 118514269 + NM_001290322 DMXL1 1 2.81 2.08 60 10.92 95.93 84 11.02 Yes 71 1.15 Yes 0 0 No -23 0.58 No 43 46.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 118524478 + NM_001290322 DMXL1 1 0.17 0.11 7 2.53 79.16 58 8.51 Yes 45 1.64 Yes 0 0 No -24 0.52 No 46 63.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 118525469 + NM_001290322 DMXL1 1 1.59 1.14 44 6.09 75.41 16 5.32 No 48 -3.68 No 0 0 No -23 0.8 Yes 47 55.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 118529548 + NM_001290322 DMXL1 1 0.17 0.17 9 5.06 75.21 34 5.85 Yes 38 1 Yes 0 0 No -28 0.32 No 42 65.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 118542528 + NM_001290322 DMXL1 1 25.22 16.08 72 1.13 77.32 36 6.22 Yes 29 1.01 Yes 25 0.83 Yes -25 0.64 No 29 73.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 118552599 + NM_001290322 DMXL1 1 1.17 0.78 33 0.1 0 44 6.7 Yes 31 0.77 Yes 0 0 No -43 0.7 Yes 27 73.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 118561370 + NM_001290322 DMXL1 1 0.17 0.13 8 0.68 70.41 55 7.68 Yes 2 0.64 No 0 0 No -32 0.45 No 51 45.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 118574551 + NM_001290322 DMXL1 1 0.43 0.36 19 5.09 77.39 16 3.8 No 57 -3.34 No 0 0 No -39 0.52 No 31 69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 51768914 - NM_001174116 DMXL2 1 61.37 10.08 72 3.06 85.65 24 5.66 Yes 7 1.15 Yes 20 0.64 Yes -23 0.57 No 47 67.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 51781845 - NM_001174116 DMXL2 1 0.86 0.15 7 3.28 0 57 7.59 Yes 44 1.54 Yes 0 0 No -52 0.4 No 18 68.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 51785856 - NM_001174116 DMXL2 1 1.35 0.31 17 6.37 84.29 37 6.46 Yes 72 0.61 No 0 0 No -36 0.38 No 34 59.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 70180534 - NR_102264 DNA2 1 2.15 1.42 54 13.1 92.08 30 5.8 Yes 51 -2.25 No 0 0 No -35 0.47 No 35 66.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 70197230 - NR_102264 DNA2 1 0.13 0.13 9 8.21 85.86 30 7.48 Yes 17 1.6 Yes 0 0 No -29 0.89 Yes 41 93.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70202864 - NR_102264 DNA2 1 2.63 1.92 62 -2.7 0 26 6.48 Yes 13 1.33 Yes 0 0 No -25 0.87 Yes 45 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70202864 - NR_102264 DNA2 1 0.28 0.21 12 -2.7 0 26 6.48 Yes 13 1.33 Yes 0 0 No -25 0.87 Yes 45 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70202864 - NR_102264 DNA2 1 0.2 0.14 9 -2.7 0 26 6.48 Yes 13 1.33 Yes 0 0 No -25 0.87 Yes 45 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70207271 - NR_102264 DNA2 1 0.26 0.26 16 6.4 88.76 28 8.42 Yes 15 1.62 Yes 0 0 No -27 0.95 Yes 43 95.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70209367 - NR_102264 DNA2 1 0.85 0.85 36 7.14 86.16 20 5.28 No 11 1.49 Yes 0 0 No -23 0.56 No 47 70.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 70217390 - NR_102264 DNA2 1 0.55 0.43 23 2.91 0 14 4.45 No -3 0.93 Yes 0 0 No -50 0.45 No 47 57.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 70217401 - NR_102264 DNA2 1 0.45 0.33 20 -2.67 61.16 40 6.45 Yes 0 0.19 No 0 0 No -24 0.8 Yes 46 70.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 70218580 - NR_102264 DNA2 1 0.34 0.31 17 5.63 84.17 27 5.2 No 68 0.25 No 0 0 No -26 0.59 No 18 77.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 70218604 - NR_102264 DNA2 1 2.6 2.08 60 4.46 83.78 43 6.56 Yes 44 0.26 No 0 0 No -28 0.59 No 42 79.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 70223423 - NR_102264 DNA2 1 0.39 0.42 23 4.64 84.41 29 5.92 Yes 64 1.04 Yes 0 0 No -29 0.68 Yes 41 78.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70225568 - NR_102264 DNA2 1 0.1 0.1 7 -3.81 77.29 26 6.4 Yes 4 0.54 No 0 0 No -25 0.31 No 45 30.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 70230370 - NR_102264 DNA2 1 0.62 0.36 20 10.24 91.82 29 6.98 Yes 30 0.66 No 28 0.77 Yes -28 0.67 Yes 42 83.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 50094874 - NM_001083908 DNAAF2 1 150.92 32.82 72 12.62 89.66 35 5.83 Yes 59 -2.08 No 0 0 No -34 0.73 Yes 36 53.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 769361 + NM_017802 DNAAF5 1 0.41 0.11 8 4.62 81.1 22 4.9 No 9 1.56 Yes 21 0.92 Yes -21 0.9 Yes 49 89.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 769577 + NM_017802 DNAAF5 1 0.59 0.32 18 10.38 94.1 22 7.22 Yes 9 2.03 Yes 0 0 No -25 0.67 Yes 49 56.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 772020 + NM_017802 DNAAF5 1 0.34 0.17 9 10.64 84.03 27 5.94 Yes 14 0.23 No 0 0 No -26 0.61 No 44 66.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 780987 + NM_017802 DNAAF5 1 0.21 0.1 7 1.53 0 35 6.4 Yes 71 1.57 Yes 0 0 No -34 0.85 Yes 36 84.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 803922 + NM_017802 DNAAF5 1 0.21 0.17 10 8 83.89 24 6.41 Yes 12 -0.82 No 0 0 No -24 0.89 Yes 46 81.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 817775 + NM_017802 DNAAF5 1 0.21 0.19 10 8.28 84.74 38 5.75 Yes 17 2.17 Yes 20 0.8 Yes -29 0.87 Yes 41 91.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 821681 + NM_017802 DNAAF5 1 1.38 0.79 41 0.88 54.84 35 7.94 Yes 22 2.12 Yes 0 0 No -34 0.8 Yes 36 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52366161 + NM_015512 DNAH1 1 1.17 0.1 7 -3.19 0 42 7.35 Yes 5 1.7 Yes 0 0 No -41 0.88 Yes 29 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52387466 + NM_015512 DNAH1 1 2.95 0.19 12 5.92 82.14 25 5.98 Yes 68 -2.9 No 0 0 No -24 0.65 No 46 42.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33026436 + NM_001539 DNAJA1 1 0.01 0.15 7 -2.97 0 12 3.92 No 16 0.4 No 22 0.81 Yes -28 0.87 Yes 42 90.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 33026453 + NM_001539 DNAJA1 1 0.04 0.49 19 -8.87 0 15 4.36 No 33 0.36 No 22 0.81 Yes -45 0.84 Yes 25 63.45 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 33026476 + NM_001539 DNAJA1 1 0.44 3.89 68 -1.03 0 27 5.62 Yes 56 0.37 No 0 0 No -26 0.6 No 44 70.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 33026479 + NM_001539 DNAJA1 1 0.12 0.97 43 -6.81 0 15 4 No 59 0.37 No 0 0 No -29 0.55 No 41 72.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 33026811 + NM_001539 DNAJA1 1 0.01 0.17 9 -13.11 0 49 6.91 Yes 36 1.34 Yes 0 0 No -21 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 33026819 + NM_001539 DNAJA1 1 0.07 0.79 34 -0.26 0 16 4.24 No 44 1.33 Yes 0 0 No -29 0.84 Yes 41 87.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33031981 + NM_001539 DNAJA1 1 0.01 0.13 8 5.64 69.19 102 9.96 Yes 35 0.1 No 0 0 No -25 0.51 No 38 53.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33032061 + NM_001539 DNAJA1 1 0.01 0.18 13 8.57 90.27 13 4.65 No 0 1.27 Yes 0 0 No -24 0.47 No 41 52.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 33036567 + NM_001539 DNAJA1 1 0.01 0.11 7 -1.01 0 20 5.41 No 66 -5.49 No 24 0.49 Yes -20 0.34 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 33036825 + NM_001539 DNAJA1 1 0.07 1.15 43 7.65 74.77 53 7.68 Yes 40 0.72 No 0 0 No -42 0.48 No 28 44.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33037017 + NM_001539 DNAJA1 1 0.02 0.33 20 0.67 0 35 4.64 No 4 0.05 No 0 0 No -34 0.89 Yes 36 92.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33038655 + NM_001539 DNAJA1 1 0.01 0.21 11 -2.75 59.83 14 4.63 No 1 0.1 No 23 0.77 Yes -13 0.35 No 57 31.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 46994219 - NM_005880 DNAJA2 1 0.12 0.29 18 8.9 94.2 37 6.4 Yes 64 -4.18 No 0 0 No -25 0.66 Yes 45 88.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 47005572 - NM_005880 DNAJA2 1 0.12 0.38 21 12.22 88.27 27 6.16 Yes 14 1.57 Yes 27 0.93 Yes -26 0.85 Yes 44 86.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 47005902 - NM_005880 DNAJA2 1 0.08 0.17 10 2.83 64.58 32 3.79 No 55 0.43 No 30 0.76 Yes -31 0.31 No 39 58.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 4476410 + NM_005147 DNAJA3 1 0.36 0.36 20 8.23 77.57 18 7.48 Yes 59 1.25 Yes 0 0 No -37 0.69 Yes 21 45.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 4481599 + NM_005147 DNAJA3 1 0.48 0.54 27 13.45 100 29 5.74 Yes 74 0.42 No 28 0.43 Yes -26 0.59 No 44 79.78 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 4486204 + NM_005147 DNAJA3 1 0.09 0.25 14 -1.74 59.3 47 9.32 Yes 34 0.99 Yes 0 0 No -46 0.82 Yes 24 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4495945 + NM_005147 DNAJA3 1 0.19 0.46 27 4 82.15 37 10.72 Yes 24 0.86 Yes 0 0 No -36 0.88 Yes 34 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4496953 + NM_005147 DNAJA3 1 0.08 0.18 10 8.02 83.93 19 6.03 Yes 69 -1.03 No 0 0 No -28 0.55 No 46 72.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 4500403 + NM_005147 DNAJA3 1 0.08 0.17 11 -8.19 68.1 22 6.48 Yes 9 0.53 No 0 0 No -21 0.8 Yes 49 55.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 186295773 + NM_016306 DNAJB11 1 0.12 0.49 23 5.03 84.09 23 9.03 Yes 10 1.75 Yes 0 0 No -26 0.56 No 44 62.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 186297669 + NM_016306 DNAJB11 1 0.09 0.35 19 5.36 83.42 32 6.48 Yes 39 0.7 No 0 0 No -31 0.73 Yes 39 66.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 74096434 - NM_017626 DNAJB12 1 0.14 0.11 8 5.88 76.08 24 5.46 No 29 0.19 No 0 0 No -47 0.62 No 23 56.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 74100661 - NM_017626 DNAJB12 1 0.4 0.46 24 12.28 85.42 22 5.29 No 67 0.45 No 22 0.95 Yes -21 0.72 Yes 50 74.44 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 74104804 - NM_017626 DNAJB12 1 0.13 0.11 7 6.83 81.59 27 4.36 No 28 1.5 Yes 0 0 No -26 0.75 Yes 44 63.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 74113167 - NM_017626 DNAJB12 1 0.16 0.15 10 8.79 83.98 28 6.93 Yes 15 1.52 Yes 0 0 No -27 0.56 No 43 76.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 100822334 - NM_001031723 DNAJB14 1 0.1 0.17 8 1.77 77.54 22 5.72 Yes 9 0.33 No 30 0.6 Yes -21 0.79 Yes 49 87.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 100822630 - NM_001031723 DNAJB14 1 0.12 0.18 11 4.22 79.42 22 5 No -2 0.16 No 0 0 No -21 0.88 Yes 45 59.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 100824420 - NM_001031723 DNAJB14 1 0.23 0.35 19 7.36 84 31 6.81 Yes 18 1.58 Yes 0 0 No -30 0.86 Yes 40 92.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 100826840 - NM_001031723 DNAJB14 1 0.1 0.17 10 8.87 84.1 29 5.39 No 26 0.61 No 0 0 No -26 0.65 No 44 80.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 100827311 - NM_001031723 DNAJB14 1 1.49 2.4 61 4.59 74.9 27 5.37 No 29 1.23 Yes 26 0.95 Yes -26 0.92 Yes 44 95.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 100827331 - NM_001031723 DNAJB14 1 0.18 0.28 16 8.06 84.43 22 5.6 Yes 9 1.25 Yes 26 0.95 Yes -21 0.69 Yes 49 75.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 100830052 - NM_001031723 DNAJB14 1 0.11 0.1 7 -3.31 79.12 30 6.09 Yes 17 1.14 Yes 0 0 No -29 0.91 Yes 41 95.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 100845973 - NM_001031723 DNAJB14 1 7.19 5.54 72 6.92 91.93 16 5.28 No 3 1.2 Yes 23 0.79 Yes -23 0.67 Yes 47 85.44 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 100849775 - NM_001031723 DNAJB14 1 4.97 3.83 67 6.41 76.02 33 5.95 Yes 37 0.62 No 33 0.65 Yes -33 0.6 No 38 61.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 220145737 + NM_006736 DNAJB2 1 0.17 0.15 7 8.28 90.17 16 5.17 No 31 1.01 Yes 0 0 No -29 0.5 No 41 45.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220147200 + NM_006736 DNAJB2 1 0.34 0.46 23 10.75 84.39 31 5.92 Yes 18 1.1 Yes 30 0.91 Yes -30 0.87 Yes 40 94.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 220147882 + NM_006736 DNAJB2 1 0.72 0.94 42 9.9 90.04 16 6.05 Yes 52 2.4 Yes 0 0 No -22 0.48 No 42 58.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 78479830 + NM_007034 DNAJB4 1 0.27 0.17 11 2.9 0 34 6.77 Yes 44 0.71 No 0 0 No -33 0.92 Yes 37 95.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 34996391 + NM_001135005 DNAJB5 1 0.98 0.36 19 3.63 86.89 26 9.16 Yes 70 0.3 No 26 0.74 Yes -26 0.86 Yes 44 83.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 34996394 + NM_001135005 DNAJB5 1 0.87 0.33 20 4.73 87.58 29 9.3 Yes 73 0.3 No 0 0 No -29 0.84 Yes 41 82.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 157160273 + NM_058246 DNAJB6 1 0.05 0.1 7 7.12 77.89 15 4.9 No 63 0.71 No 0 0 No -37 0.57 No 33 76.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 157161458 + NM_058246 DNAJB6 1 0.07 0.11 7 2.76 72.86 13 6.08 Yes 33 0.22 No 23 0.52 Yes -35 0.53 No 40 68.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 157161497 + NM_058246 DNAJB6 1 0.21 0.35 14 -2.28 76.21 44 4.96 No 8 0.64 No 0 0 No -26 0.51 No 39 60.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 157174526 + NM_058246 DNAJB6 1 0.13 0.21 11 -2.15 70.93 37 7 Yes 24 1.26 Yes 0 0 No -32 0.55 No 34 82.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 157174529 + NM_058246 DNAJB6 1 0.13 0.24 16 -2.08 72.57 40 7.21 Yes 27 1.25 Yes 0 0 No -39 0.5 No 31 84.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 157174588 + NM_058246 DNAJB6 1 0.08 0.14 9 8.59 86.32 22 5.2 No 63 0.81 Yes 0 0 No -21 0.5 No 49 73.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 157174942 + NM_058246 DNAJB6 1 1.29 2.35 62 0.81 76.5 31 5.82 Yes 45 -2.55 No 0 0 No -30 0.95 Yes 40 96.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 157176702 + NM_058246 DNAJB6 1 0.04 0.13 7 8 88.71 28 6.35 Yes 2 0.54 No 0 0 No -28 0.59 No 42 69.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 22045681 - NM_022365 DNAJC1 1 0.17 0.13 8 -2.09 0 38 6.61 Yes 16 2.01 Yes 0 0 No -28 0.94 Yes 42 88.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22050477 - NM_022365 DNAJC1 1 0.48 0.4 24 10.62 88.27 30 5.48 No 67 1.24 Yes 0 0 No -27 0.85 Yes 43 86.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22092914 - NM_022365 DNAJC1 1 0.84 1.03 42 11.34 84.16 32 8.06 Yes 19 0.36 No 0 0 No -31 0.83 Yes 39 90.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 22163358 - NM_022365 DNAJC1 1 0.48 0.46 26 11.94 95.65 29 7.07 Yes 16 1.28 Yes 0 0 No -28 0.95 Yes 42 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22168813 - NM_022365 DNAJC1 1 2.52 2.57 66 10.8 88.94 33 6.3 Yes 20 0.34 No 0 0 No -28 0.5 No 42 75.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 22171315 - NM_022365 DNAJC1 1 0.77 0.93 36 5 67.96 25 5.44 No 67 0.88 Yes 0 0 No -24 0.5 No 46 45.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 22171364 - NM_022365 DNAJC1 1 0.39 0.5 27 0.51 0 31 6.19 Yes 18 0.9 Yes 0 0 No -34 0.55 No 40 57.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 22171364 - NM_022365 DNAJC1 1 0.33 0.39 22 0.51 0 31 6.19 Yes 18 0.9 Yes 0 0 No -34 0.55 No 40 57.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 22195446 - NM_022365 DNAJC1 1 1.05 1.04 42 5.17 79.46 51 7.85 Yes 38 1.53 Yes 0 0 No -50 0.62 No 20 86.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 183582883 + NR_073366 DNAJC10 1 3.49 5.36 71 7.79 80.34 29 4.13 No 67 -3.77 No 28 0.78 Yes -28 0.73 Yes 42 72.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 183590362 + NR_073366 DNAJC10 1 0.08 0.15 10 -5.47 0 13 3.87 No 15 1.64 Yes 0 0 No -27 0.71 Yes 43 89.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 183605025 + NR_073366 DNAJC10 1 8.45 0.83 42 8.57 85.02 16 4.52 No 3 0.6 No 23 0.7 Yes -21 0.78 Yes 49 72.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 183605025 + NR_073366 DNAJC10 1 129.13 11.68 72 8.57 85.02 16 4.52 No 3 0.6 No 23 0.7 Yes -21 0.78 Yes 49 72.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 183605025 + NR_073366 DNAJC10 1 1357.93 123.64 72 8.57 85.02 16 4.52 No 3 0.6 No 23 0.7 Yes -21 0.78 Yes 49 72.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 183606938 + NR_073366 DNAJC10 1 0.07 0.14 9 2.8 0 37 7.54 Yes 24 0.28 No 0 0 No -36 0.68 Yes 34 62.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 183607101 + NR_073366 DNAJC10 1 0.09 0.15 9 6.15 85 20 6 Yes 7 1.16 Yes 0 0 No -19 0.65 No 51 83.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 183608384 + NR_073366 DNAJC10 1 2.01 4.13 71 7.13 86.38 18 5.29 No 65 1.36 Yes 0 0 No -18 0.61 No 49 73.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 183608875 + NR_073366 DNAJC10 1 0.09 0.22 14 6.73 86.81 42 7.84 Yes 29 1.84 Yes 0 0 No -41 0.72 Yes 29 71.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 183612942 + NR_073366 DNAJC10 1 0.09 0.21 10 6.07 80.75 33 7.21 Yes 20 1.11 Yes 0 0 No -32 0.88 Yes 38 86.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 183616389 + NR_073366 DNAJC10 1 0.15 0.31 17 -10.25 0 30 7.07 Yes 7 0.92 Yes 0 0 No -34 0.53 No 36 81.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 183623566 + NR_073366 DNAJC10 1 1.04 1.5 55 7.6 86.55 23 6.92 Yes 10 1.74 Yes 0 0 No -29 0.79 Yes 41 66.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 183640044 + NR_073366 DNAJC10 1 0.29 0.6 35 -3.59 82.94 23 5.1 No 10 0.17 No 0 0 No -22 0.8 Yes 48 81.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6697598 - NM_018198 DNAJC11 1 0.06 0.1 7 -5.54 0 14 4.07 No 46 0.84 Yes 26 0.96 Yes -25 0.41 No 18 23.23 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 6697607 - NM_018198 DNAJC11 1 0.14 0.19 12 -7.7 0 17 4.24 No 37 0.85 Yes 26 0.96 Yes -16 0.81 Yes 54 42.41 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 6698233 - NM_018198 DNAJC11 1 0.17 0.19 10 5.13 69.47 45 4.69 No 32 -0.55 No 0 0 No -22 0.62 No 48 69.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 6698680 - NM_018198 DNAJC11 1 0.27 0.31 19 4.72 79.68 34 7.68 Yes 21 0.77 Yes 0 0 No -33 0.6 No 37 73.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 6704730 - NM_018198 DNAJC11 1 0.4 0.69 33 -1.09 0 22 4.02 No 59 -2.46 No 0 0 No -25 0.77 Yes 45 52.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 6706011 - NM_018198 DNAJC11 1 0.61 1.1 43 3.76 81.16 22 6.08 Yes 9 -0.68 No 0 0 No -21 0.75 Yes 49 83.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6706011 - NM_018198 DNAJC11 1 0.09 0.19 11 3.76 81.16 22 6.08 Yes 9 -0.68 No 0 0 No -21 0.75 Yes 49 83.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6713448 - NM_018198 DNAJC11 1 0.1 0.19 12 3.06 76.35 22 4.25 No 9 0.82 Yes 0 0 No -25 0.93 Yes 45 91.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6713476 - NM_018198 DNAJC11 1 0.15 0.25 16 5.85 87.57 24 5 No 66 0.62 No 0 0 No -23 0.86 Yes 47 86.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6714348 - NM_018198 DNAJC11 1 0.19 0.28 16 7.15 89.18 35 7.75 Yes 22 1.98 Yes 34 0.85 Yes -34 0.9 Yes 36 97.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 6716159 - NM_018198 DNAJC11 1 0.22 0.28 16 10.62 88.27 32 5.9 Yes 13 1.17 Yes 0 0 No -25 0.56 No 44 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 6727113 - NM_018198 DNAJC11 1 0.08 0.13 9 11.44 92 25 5.54 No 12 1.41 Yes 0 0 No -24 0.85 Yes 46 93.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6732389 - NM_018198 DNAJC11 1 0.41 0.46 26 13.3 98.22 29 5.92 Yes 32 0.46 No 0 0 No -28 0.45 No 42 81.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 6734124 - NM_018198 DNAJC11 1 0.09 0.11 8 3.44 78.23 27 7.06 Yes 39 0.08 No 0 0 No -26 0.89 Yes 44 91.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6751892 - NM_018198 DNAJC11 1 0.05 0.11 8 5.46 78.36 33 6.16 Yes 47 0.45 No 0 0 No -27 0.55 No 51 55.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 132140467 + NM_001329126 DNAJC13 1 3.69 2.01 61 10.32 88.76 27 7.62 Yes 14 1.46 Yes 0 0 No -26 0.88 Yes 44 91.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 132155085 + NM_001329126 DNAJC13 1 0.25 0.19 12 10.23 90.27 28 6.24 Yes 15 1.56 Yes 0 0 No -27 0.85 Yes 43 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 132171726 + NM_001329126 DNAJC13 1 0.34 0.36 20 3.81 75.86 28 6.51 Yes 58 -4.38 No 0 0 No -27 0.37 No 43 51.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 132179967 + NM_001329126 DNAJC13 1 0.55 0.68 28 6.22 74.16 27 7.28 Yes 14 1.3 Yes 0 0 No -26 0.81 Yes 44 93.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 132182543 + NM_001329126 DNAJC13 1 0.4 0.51 25 -0.56 0 20 5.14 No 7 1.06 Yes 0 0 No -31 0.68 Yes 39 85.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 132184794 + NM_001329126 DNAJC13 1 1.27 1.39 51 9.29 81.38 35 6.15 Yes 22 0.55 No 0 0 No -21 0.69 Yes 49 74.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 132192340 + NM_001329126 DNAJC13 1 0.17 0.18 10 5.21 88.54 34 5.85 Yes 39 0.07 No 0 0 No -23 0.91 Yes 47 96.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 132192749 + NM_001329126 DNAJC13 1 0.32 0.32 20 7.42 86.52 28 4.87 No 47 -3.75 No 0 0 No -28 0.64 No 42 87.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 132196923 + NM_001329126 DNAJC13 1 0.46 0.5 24 8.01 82.34 28 5.57 Yes 70 0.87 Yes 0 0 No -27 0.9 Yes 43 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 132203206 + NM_001329126 DNAJC13 1 1.28 1.58 58 7.01 87.44 25 4.44 No 28 -2.17 No 20 0.6 Yes -24 0.39 No 43 37.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 132207271 + NM_001329126 DNAJC13 1 0.27 0.26 16 5.34 76.75 35 6 Yes 38 0.78 Yes 0 0 No -34 0.78 Yes 36 85.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 132217957 + NM_001329126 DNAJC13 1 0.32 0.44 22 -5.2 0 35 8.91 Yes -1 0.94 Yes 23 0.93 Yes -34 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 132217993 + NM_001329126 DNAJC13 1 0.25 0.35 15 4.6 81.13 21 4.99 No 29 1.65 Yes 0 0 No -20 0.19 No 23 83.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 132229950 + NM_001329126 DNAJC13 1 0.11 0.13 8 3.24 77.13 20 5.1 No 30 -3.52 No 0 0 No -20 0.87 Yes 50 87.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56216258 - NM_032364 DNAJC14 1 0.54 0.51 25 -15.44 72.02 23 8.4 Yes 46 1.38 Yes 0 0 No -22 0.87 Yes 48 83.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56216514 - NM_032364 DNAJC14 1 0.14 0.15 11 -9.71 68.98 30 4.99 No 68 -3.23 No 0 0 No -29 0.87 Yes 41 86.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 43611900 + NM_013238 DNAJC15 1 0.08 0.11 8 2.22 74.69 28 7.52 Yes 15 1.22 Yes 0 0 No -27 0.67 Yes 43 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43633033 + NM_013238 DNAJC15 1 0.19 0.29 15 8.96 88.21 27 5.63 Yes 41 1.39 Yes 0 0 No -33 0.31 No 44 49.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 43633529 + NM_013238 DNAJC15 1 0.11 0.15 9 2.23 83.28 39 6.22 Yes 26 1.11 Yes 0 0 No -30 0.92 Yes 40 94.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43662911 + NM_013238 DNAJC15 1 0.12 0.42 20 6 72.88 40 5.64 Yes 69 0.93 Yes 0 0 No -27 0.8 Yes 43 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43667735 + NM_013238 DNAJC15 1 0.07 0.24 10 9.7 87.44 24 5.92 Yes 65 1.26 Yes 0 0 No -23 0.8 Yes 47 89.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 15867070 + NR_109898 DNAJC16 1 0.26 0.11 7 7.07 81.34 31 6.01 Yes 40 0.9 Yes 0 0 No -30 0.7 Yes 40 65.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 15891676 + NR_109898 DNAJC16 1 0.23 0.13 8 6.41 74.71 24 6.36 Yes 7 2.24 Yes 23 0.95 Yes -23 0.84 Yes 47 72.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41066021 - NM_018163 DNAJC17 1 0.44 0.15 11 -4.54 0 15 4.42 No 43 0.02 No 0 0 No -31 0.54 No 53 41.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41068600 - NM_018163 DNAJC17 1 2.49 1.25 50 9.92 86.6 18 5.72 Yes 5 0.55 No 26 0.68 Yes -26 0.55 No 44 74.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 138754862 - NM_152686 DNAJC18 1 3.38 0.82 33 12.41 99.45 31 7.54 Yes 44 1.39 Yes 30 0.81 Yes -30 0.91 Yes 40 88.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 138760774 - NM_152686 DNAJC18 1 0.46 0.15 9 6.62 72.44 22 6.24 Yes 9 0.18 No 27 0.9 Yes -21 0.91 Yes 49 81.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 180703411 - NM_001190233 DNAJC19 1 0.07 0.22 13 10.85 81.38 29 10.33 Yes 9 0.71 No 0 0 No -28 0.63 No 42 77.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 102956343 - NM_014377 DNAJC2 1 0.1 0.17 10 -0.1 62.84 14 3.26 No 49 0.3 No 26 0.81 Yes -28 0.51 No 42 57.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 102957458 - NM_014377 DNAJC2 1 0.13 0.19 11 -1.7 0 24 6.09 Yes 11 1.35 Yes 0 0 No -23 0.67 Yes 47 48.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 102962292 - NM_014377 DNAJC2 1 0.13 0.17 12 10.64 87.01 41 4.97 No 24 0.42 No 0 0 No -36 0.49 No 34 63.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 102963067 - NM_014377 DNAJC2 1 0.19 0.31 19 -1.37 66.03 11 4.36 No 18 1.33 Yes 0 0 No -36 0.41 No 40 52.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 102964073 - NM_014377 DNAJC2 1 0.1 0.1 7 4.46 85.17 25 4.9 No 21 0.26 No 19 0.5 Yes -27 0.47 No 51 40.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 102966148 - NM_014377 DNAJC2 1 2.37 1.63 55 7.92 82.24 30 6.02 Yes 55 0.44 No 0 0 No -27 0.32 No 41 38.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 102967826 - NM_014377 DNAJC2 1 7.68 11.32 71 7.06 85.81 23 7.03 Yes 10 0.56 No 22 0.9 Yes -22 0.69 Yes 48 73.74 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 102982313 - NM_014377 DNAJC2 1 3.36 2.36 61 11.87 91.59 18 4.86 No 35 0.13 No 24 0.29 Yes -24 0.4 No 46 56.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 34937434 + NM_194283 DNAJC21 1 0.79 2.51 62 0.3 0 26 6.07 Yes 58 1.03 Yes 0 0 No -25 0.88 Yes 45 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 34938084 + NM_194283 DNAJC21 1 1.14 2.11 63 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -21 0.67 Yes 49 72.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 34938087 + NM_194283 DNAJC21 1 0.17 0.35 21 1.44 77.7 20 5.57 Yes 7 1.04 Yes 0 0 No -24 0.55 No 51 74.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 34941185 + NM_194283 DNAJC21 1 0.06 0.11 8 3.09 83.13 24 4.79 No 42 1.05 Yes 22 0.96 Yes -23 0.86 Yes 47 84.85 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 34943468 + NM_194283 DNAJC21 1 0.06 0.14 9 4.82 72.66 32 5.64 Yes 19 0.81 Yes 0 0 No -31 0.86 Yes 39 86.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 34944900 + NM_194283 DNAJC21 1 0.09 0.19 12 5.68 84.17 19 5.48 No 6 0.97 Yes 0 0 No -18 0.7 Yes 52 83.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 34945826 + NM_194283 DNAJC21 1 1.46 3.51 65 8.7 87.49 44 6.24 Yes 60 1.04 Yes 32 0.85 Yes -32 0.92 Yes 38 70.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 34949681 + NM_194283 DNAJC21 1 0.68 0.17 10 7.11 83 15 5.19 No 2 0.37 No 0 0 No -22 0.49 No 48 75.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 34950548 + NM_194283 DNAJC21 1 4.71 13.63 72 7.01 74.15 27 6.99 Yes -3 0.44 No 26 0.33 Yes -38 0.38 No 32 47.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 34950583 + NM_194283 DNAJC21 1 0.22 0.67 30 5 75.92 33 5.91 Yes 28 0.25 No 0 0 No -28 0.53 No 42 73.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 34954047 + NM_194283 DNAJC21 1 0.05 0.15 10 3.28 72.73 27 5.1 No 22 1.08 Yes 0 0 No -26 0.73 Yes 36 50.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 31395649 + NM_181706 DNAJC24 1 0.28 0.17 9 6.07 84.54 63 6.8 Yes 28 0.63 No 40 0.74 Yes -40 0.71 Yes 30 80.31 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 31406140 + NM_181706 DNAJC24 1 0.6 0.32 18 10.67 96.22 41 6.4 Yes 46 0.41 No 31 0.32 Yes -34 0.64 No 39 84.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 31417829 + NM_181706 DNAJC24 1 2.97 1.6 53 12.13 98.91 26 8.18 Yes 13 2.25 Yes 25 0.94 Yes -25 0.92 Yes 45 94.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 31421861 + NM_181706 DNAJC24 1 4.16 2.28 62 8.61 84.86 38 6.72 Yes 66 -4.72 No 0 0 No -21 0.54 No 46 62.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 31429002 + NM_181706 DNAJC24 1 1.43 0.75 35 1.75 67.48 23 5.79 Yes 49 -5.24 No 22 0.82 Yes -22 0.88 Yes 48 91.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 31429656 + NM_181706 DNAJC24 1 6.57 3.63 67 9.62 87.6 34 8.23 Yes 68 -4.08 No 22 0.51 Yes -22 0.46 No 43 59.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 31429808 + NM_181706 DNAJC24 1 0.28 0.15 10 7.74 75.23 25 5.29 No 50 1.66 Yes 0 0 No -25 0.71 Yes 47 53.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 31443518 + NM_181706 DNAJC24 1 2.38 1 38 8.63 92.08 18 5.91 Yes 61 1.2 Yes 31 0.18 Yes -29 0.43 No 41 71.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 31447836 + NM_181706 DNAJC24 1 0.57 0.26 15 1.15 70.79 28 4.84 No 9 0.45 No 0 0 No -27 0.49 No 36 45.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 31451029 + NM_181706 DNAJC24 1 3.33 1.26 46 6.41 88.96 23 4.91 No 10 0.89 Yes 22 0.95 Yes -22 0.75 Yes 48 89.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 96357801 + NM_006260 DNAJC3 1 0.81 1.22 47 9.7 88.62 55 8.67 Yes 42 2.47 Yes 0 0 No -54 0.89 Yes 16 94.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 96394887 + NM_006260 DNAJC3 1 1.35 3.07 63 11.17 86.95 26 6.48 Yes 13 1.72 Yes 0 0 No -25 0.95 Yes 45 96.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 96409878 + NM_006260 DNAJC3 1 0.16 0.33 16 0.99 59.73 15 5.04 No 41 0.29 No 21 0.66 Yes -23 0.63 No 48 58.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 96412312 + NM_006260 DNAJC3 1 0.08 0.24 15 4.04 79.52 23 5.29 No 47 0.45 No 0 0 No -45 0.62 No 48 72.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 63998503 + NM_001307980 DNAJC4 1 1.74 1.07 44 4.36 83.27 30 5.64 Yes 17 0.36 No 29 0.84 Yes -29 0.76 Yes 41 71.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 63999859 + NM_001307980 DNAJC4 1 0.12 0.1 7 -11.77 65.87 22 4.92 No 67 -5.18 No 27 0.81 Yes -21 0.82 Yes 49 60.61 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 63999865 + NM_001307980 DNAJC4 1 0.84 0.71 31 -7.22 0 15 3.87 No 73 -5.56 No 27 0.81 Yes -27 0.51 No 43 76.85 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 63999981 + NM_001307980 DNAJC4 1 0.7 0.6 26 0.61 72.8 24 5.1 No 11 -0.58 No 23 0.97 Yes -23 0.84 Yes 47 71.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64000175 + NM_001307980 DNAJC4 1 2.11 0.17 11 8.85 80.01 36 6.92 Yes 69 1.37 Yes 32 0.87 Yes -35 0.66 No 35 84.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 64000175 + NM_001307980 DNAJC4 1 871.25 68.1 72 8.85 80.01 36 6.92 Yes 69 1.37 Yes 32 0.87 Yes -35 0.66 No 35 84.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 64000805 + NM_001307980 DNAJC4 1 0.2 0.14 8 8.29 88.68 27 7.21 Yes 57 1.48 Yes 0 0 No -26 0.92 Yes 44 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64001369 + NM_001307980 DNAJC4 1 0.19 0.15 9 -4.19 0 22 5.9 Yes 3 0.34 No 0 0 No -21 0.88 Yes 49 68.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 64001492 + NM_001307980 DNAJC4 1 0.12 0.11 8 9.48 90.14 26 5.67 Yes 66 -2.29 No 0 0 No -25 0.65 No 45 79.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 62560668 + NM_025219 DNAJC5 1 0.59 0.72 38 -4.01 0 27 5.74 Yes NA NA NA 0 0 No -30 0.64 No 47 59.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62562461 + NM_025219 DNAJC5 1 27.57 26.1 72 8.53 83.77 29 6.9 Yes 16 0.66 No 28 0.84 Yes -28 0.81 Yes 42 69.4 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 62562819 + NM_025219 DNAJC5 1 0.11 0.11 7 -0.92 81.66 24 5.79 Yes NA NA NA 0 0 No -27 0.87 Yes 43 86.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40139713 - NM_001144766 DNAJC7 1 0.98 3.93 71 12.58 79.02 26 5.79 Yes 18 0.3 No 25 0.85 Yes -25 0.69 Yes 45 76.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40139924 - NM_001144766 DNAJC7 1 0.12 0.5 27 2.24 0 27 5.79 Yes 56 0.7 No 28 0.7 Yes -26 0.57 No 37 73.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 40149256 - NM_001144766 DNAJC7 1 0.04 0.13 7 -11.23 0 37 7.54 Yes 24 1.6 Yes 0 0 No -36 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 28527877 - NM_014280 DNAJC8 1 0.05 0.31 20 -5.12 0 42 7.4 Yes 29 1.64 Yes 0 0 No -29 0.87 Yes 41 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28529974 - NM_014280 DNAJC8 1 0.04 0.24 13 7.52 70.09 28 5.64 Yes 15 1.68 Yes 0 0 No -27 0.91 Yes 43 96.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28531818 - NM_014280 DNAJC8 1 0.08 0.44 24 5.95 78.52 14 4.36 No 60 1.48 Yes 0 0 No -25 0.46 No 46 37.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 28531818 - NM_014280 DNAJC8 1 0.39 2.39 50 5.95 78.52 14 4.36 No 60 1.48 Yes 0 0 No -25 0.46 No 46 37.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 28537662 - NM_014280 DNAJC8 1 0.06 0.44 22 1.51 0 47 7.79 Yes 50 0.28 No 0 0 No -46 0.65 No 24 82.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 28556764 - NM_014280 DNAJC8 1 1.64 4.74 72 7.5 86.08 47 5.64 Yes 34 1.09 Yes 33 0.48 Yes -33 0.9 Yes 37 91.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 75005933 - NM_015190 DNAJC9 1 0.05 0.1 7 -11.7 0 26 5.5 No 49 1.76 Yes 0 0 No -25 0.64 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75006345 - NM_015190 DNAJC9 1 0.91 1.67 57 8.67 85.76 30 6 Yes 62 1.36 Yes 0 0 No -29 0.89 Yes 41 91.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 75006372 - NM_015190 DNAJC9 1 0.06 0.11 7 3.21 69.78 32 4.14 No 35 1.37 Yes 0 0 No -27 0.49 No 39 52.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75006558 - NM_015190 DNAJC9 1 4.13 4.88 70 6.46 85.36 14 5 No 38 0.07 No 0 0 No -21 0.35 No 48 50.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74170389 + NM_001201366 DNAL1 1 0.64 0.18 12 5.34 81.48 20 7.12 Yes 7 2.23 Yes 0 0 No -37 0.49 No 33 68.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39182003 - NM_005740 DNAL4 1 4.07 0.44 25 12.44 84.89 35 9.58 Yes 22 1.26 Yes 34 0.43 Yes -35 0.75 Yes 35 81.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 3707790 + NM_005223 DNASE1 1 1.96 0.19 12 10.02 93.9 27 7.07 Yes -4 0.28 No 26 0.63 Yes -30 0.48 No 44 76.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 12987071 - NM_001375 DNASE2 1 0.3 0.21 13 5.67 76.75 21 6.5 Yes 8 0.49 No 0 0 No -20 0.9 Yes 50 89.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 6526667 + NM_144666 DNHD1 1 2.13 0.24 16 5.02 80.12 20 6.15 Yes 7 1.22 Yes 0 0 No -32 0.49 No 38 64.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 6532542 + NM_144666 DNHD1 1 3.12 0.17 9 7.61 82.08 26 6 Yes 51 1.85 Yes 0 0 No -23 0.89 Yes 47 88.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 6549754 + NM_144666 DNHD1 1 2.53 0.17 11 -1.7 69.99 33 6.9 Yes 20 0.65 No 0 0 No -32 0.94 Yes 38 93.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 6549754 + NM_144666 DNHD1 1 10.15 0.63 29 -1.7 69.99 33 6.9 Yes 20 0.65 No 0 0 No -32 0.94 Yes 38 93.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 6580417 + NM_144666 DNHD1 1 5.59 0.25 15 -3.41 0 10 4 No 66 0.92 Yes 0 0 No -28 0.93 Yes 42 92.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 6586771 + NM_144666 DNHD1 1 4.48 0.22 15 7.94 82.94 21 6.24 Yes 8 1.03 Yes 0 0 No -20 0.87 Yes 50 85.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139257585 - NM_001080849 DNLZ 1 3.09 1.39 49 1.56 79.51 20 4.8 No 7 1.31 Yes 23 0.97 Yes -19 0.93 Yes 51 90.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 32835807 + NM_001278464 DNM1L 1 0.3 0.36 20 6.37 84.45 26 5.57 Yes 34 0.77 Yes 0 0 No -25 0.77 Yes 45 77.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 32862477 + NM_001278464 DNM1L 1 0.77 1.1 43 5.61 86.87 24 4.8 No 11 0.69 No 23 0.96 Yes -23 0.93 Yes 47 97.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 32883921 + NM_001278464 DNM1L 1 0.28 0.54 25 4.82 81.37 34 7 Yes 21 2.05 Yes 28 0.25 Yes -33 0.9 Yes 37 93.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 32885471 + NM_001278464 DNM1L 1 0.16 0.33 14 2.78 63.53 50 9.17 Yes 37 1.08 Yes 24 0.03 Yes -49 0.88 Yes 21 95.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10908055 + NM_001005360 DNM2 1 36.06 62.46 72 5.27 76.59 109 8.98 Yes 11 1.12 Yes 23 0.93 Yes -23 0.76 Yes 47 86.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10908055 + NM_001005360 DNM2 1 0.25 0.39 20 5.27 76.59 109 8.98 Yes 11 1.12 Yes 23 0.93 Yes -23 0.76 Yes 47 86.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10935711 + NM_001005360 DNM2 1 0.33 0.68 36 -1.13 0 16 4.32 No -3 0.29 No 23 0.94 Yes -13 0.17 No 55 31.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 10941656 + NM_001005360 DNM2 1 28.68 37.04 72 4.85 87.05 47 8.81 Yes 34 2.01 Yes 43 0.83 Yes -46 0.64 No 24 78.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 101640958 - NM_015221 DNMBP 1 1.31 0.67 28 6.87 93.18 28 5.29 No 29 0.68 No 0 0 No -27 0.87 Yes 43 82.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 101646269 - NM_015221 DNMBP 1 0.92 0.43 19 3.78 78.52 31 5.83 Yes -3 0.29 No 0 0 No -30 0.79 Yes 40 58.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 101646387 - NM_015221 DNMBP 1 0.82 0.28 16 0.62 71.07 31 6.07 Yes 18 0.59 No 0 0 No -30 0.73 Yes 40 76.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 101667079 - NM_015221 DNMBP 1 0.49 0.25 15 8.88 96.76 26 7.21 Yes 19 0.52 No 0 0 No -25 0.87 Yes 45 89.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 101691203 - NM_015221 DNMBP 1 0.95 0.44 21 6.82 91.17 27 5.2 No 72 1.64 Yes 0 0 No -26 0.45 No 44 43.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 101762781 - NM_015221 DNMBP 1 17.15 3.15 64 11.73 91.91 19 4.64 No 49 1.53 Yes 0 0 No -31 0.89 Yes 39 91.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101766100 - NM_015221 DNMBP 1 0.86 0.17 11 4.47 97.31 11 5 No 51 0.86 Yes 0 0 No -18 0.65 No 52 65.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10246189 - NM_001379 DNMT1 1 0.19 0.28 14 1.51 0 21 7.28 Yes 8 0.97 Yes 0 0 No -20 0.78 Yes 50 93.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10250526 - NM_001379 DNMT1 1 0.14 0.21 12 2.34 81.01 39 6.14 Yes 70 -2.52 No 21 0.54 Yes -33 0.49 No 39 66.42 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 10250924 - NM_001379 DNMT1 1 0.13 0.31 19 3.12 75.5 20 6.32 Yes 7 0.79 Yes 0 0 No -19 0.65 No 51 67.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10251881 - NM_001379 DNMT1 1 0.08 0.14 7 5.57 67.63 12 5.75 Yes 59 0.39 No 22 0.66 Yes -28 0.4 No 42 67.81 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 10257200 - NM_001379 DNMT1 1 0.04 0.1 7 -8.9 0 29 6.34 Yes 16 0.9 Yes 0 0 No -28 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 10259690 - NM_001379 DNMT1 1 0.08 0.14 9 -9.57 0 27 7.21 Yes 14 1.69 Yes 0 0 No -26 0.93 Yes 44 93.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10260716 - NM_001379 DNMT1 1 0.11 0.22 10 -0.86 0 15 3.86 No 9 0.42 No 0 0 No -31 0.43 No 49 32.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10260722 - NM_001379 DNMT1 1 0.15 0.28 18 2.36 77.62 26 4.44 No 3 0.46 No 0 0 No -25 0.46 No 42 47.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10265040 - NM_001379 DNMT1 1 0.07 0.14 8 8.27 90.08 16 4.88 No 76 -0.42 No 0 0 No -26 0.66 No 43 67.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10265407 - NM_001379 DNMT1 1 0.21 0.68 32 4.3 73.42 47 7.11 Yes 7 0.43 No 19 0.75 Yes -19 0.72 Yes 51 76.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10267184 - NM_001379 DNMT1 1 0.06 0.15 10 -18.4 0 28 5.83 Yes 74 1.01 Yes 0 0 No -24 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 10285083 - NM_001379 DNMT1 1 0.15 0.31 17 6.55 0 44 6.93 Yes 76 1.59 Yes 0 0 No -41 0.86 Yes 29 85.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10286453 - NM_001379 DNMT1 1 0.07 0.22 12 6.16 77.66 19 5 No -3 0.68 No 0 0 No -28 0.61 No 52 43.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10290911 - NM_001379 DNMT1 1 46.9 73.89 72 6.75 88.68 22 4.68 No 3 1.82 Yes 21 0.95 Yes -21 0.93 Yes 49 87.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10291206 - NM_001379 DNMT1 1 3.86 5.9 71 1.2 74.66 25 5.44 No 76 2.09 Yes 24 0.91 Yes -24 0.82 Yes 46 82.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10291513 - NM_001379 DNMT1 1 0.16 0.18 12 4.2 80.19 29 6.04 Yes 57 1.47 Yes 28 0.52 Yes -28 0.73 Yes 42 59.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 10298379 - NM_001379 DNMT1 1 0.31 0.31 19 4.63 83.83 18 5.37 No 67 1 Yes 0 0 No -17 0.55 No 53 75.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 25458690 - NM_153759 DNMT3A 1 1.47 1.54 54 2.67 0 43 5.67 Yes 34 0.93 Yes 0 0 No -31 0.95 Yes 39 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25458690 - NM_153759 DNMT3A 1 0.11 0.11 8 2.67 0 43 5.67 Yes 34 0.93 Yes 0 0 No -31 0.95 Yes 39 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25462383 - NM_153759 DNMT3A 1 1.82 0.99 41 8.6 78.88 19 5.56 Yes 25 1.63 Yes 22 0.84 Yes -22 0.58 No 48 44.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 25467274 - NM_153759 DNMT3A 1 0.31 0.22 12 11.75 96.14 30 5.36 No NA NA NA 0 0 No -22 0.75 Yes 48 75.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 25467619 - NM_153759 DNMT3A 1 0.13 0.14 9 6.2 83.87 27 5.74 Yes 14 -1.24 No 0 0 No -26 0.81 Yes 44 85.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 25469176 - NM_153759 DNMT3A 1 0.51 0.43 24 0.81 73.56 31 6.89 Yes 18 1.74 Yes 0 0 No -30 0.81 Yes 40 87.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 25469686 - NM_153759 DNMT3A 1 0.47 0.44 20 6.97 84.85 18 5.47 No 5 2.31 Yes 31 0.92 Yes -23 0.7 Yes 47 69.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 25470208 - NM_153759 DNMT3A 1 0.8 0.58 31 8.95 79.26 29 5.66 Yes 16 0.43 No 0 0 No -28 0.93 Yes 42 87.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 220246243 - NM_001319121 DNPEP 1 0.09 0.14 9 10.44 83.65 22 5.29 No 67 0.53 No 26 0.15 Yes -21 0.78 Yes 51 79.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 220250272 - NM_001319121 DNPEP 1 0.52 0.76 35 0.07 79.59 16 4.85 No 66 0.09 No 23 0.63 Yes -24 0.31 No 51 32.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 220250409 - NM_001319121 DNPEP 1 0.06 0.1 7 6.53 84.54 25 5.19 No 55 0.96 Yes 0 0 No -27 0.44 No 46 58.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220251703 - NM_001319121 DNPEP 1 1153.92 107.42 72 6.61 87.38 21 5 No 38 1.57 Yes 20 0.88 Yes -20 0.65 No 50 70.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 43193436 - NM_006443 DNPH1 1 0.36 0.67 27 7.31 89.86 37 5.58 Yes 37 1.33 Yes 0 0 No -26 0.88 Yes 44 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44425096 + NM_052951 DNTTIP1 1 0.28 0.32 21 11.83 90.1 22 5.29 No -2 0.83 Yes 21 0.79 Yes -21 0.73 Yes 49 83.91 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 44431968 + NM_052951 DNTTIP1 1 2.51 2.21 64 5.38 78.22 23 5.29 No 24 1.32 Yes 25 0.85 Yes -22 0.93 Yes 48 90.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 94338979 - NM_014597 DNTTIP2 1 0.21 0.61 31 10.55 93.23 32 7.94 Yes 19 1.58 Yes 0 0 No -31 0.84 Yes 39 91.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 94341358 - NM_014597 DNTTIP2 1 0.08 0.21 12 5.09 72.48 59 6.23 Yes 2 0.42 No 21 0.78 Yes -38 0.58 No 32 79.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 94343046 - NM_014597 DNTTIP2 1 0.32 0.56 28 5.39 88.25 22 4.9 No 9 0.61 No 21 0.92 Yes -21 0.87 Yes 49 82.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 94343417 - NM_014597 DNTTIP2 1 0.08 0.18 11 -7.05 69.07 32 5.27 No 19 0.29 No 0 0 No -25 0.74 Yes 45 78.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 225630883 - NM_001290263 DOCK10 1 0.27 0.39 20 9.86 88.41 21 8.12 Yes 8 1.82 Yes 0 0 No -20 0.46 No 50 42.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 225635056 - NM_001290263 DOCK10 1 0.12 0.22 14 -1.4 0 15 4.47 No 23 0.26 No 0 0 No -35 0.62 No 35 69.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 225659807 - NM_001290263 DOCK10 1 1.82 3.82 71 -0.29 0 30 4.99 No 17 1.29 Yes 0 0 No -29 0.92 Yes 41 93.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 225660804 - NM_001290263 DOCK10 1 0.08 0.17 8 -19.09 0 11 3.87 No -2 0.28 No 0 0 No -10 0.65 No 60 66.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 225662685 - NM_001290263 DOCK10 1 0.11 0.17 10 -5.56 72.12 59 6.1 Yes 57 0.28 No 0 0 No -33 0.41 No 37 61.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 225665735 - NM_001290263 DOCK10 1 0.08 0.14 9 8.68 91.26 31 5.74 Yes 18 1.16 Yes 0 0 No -30 0.69 Yes 40 78.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 225668930 - NM_001290263 DOCK10 1 0.14 0.17 9 -13.43 0 34 3.95 No 70 1.23 Yes 0 0 No -22 0.46 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 225670220 - NM_001290263 DOCK10 1 12.6 20.36 72 0.58 0 21 4.16 No 5 -0.9 No 20 0.85 Yes -20 0.93 Yes 50 89.83 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 225670232 - NM_001290263 DOCK10 1 2.67 4.36 70 4.33 76.34 20 4.9 No 68 0.57 No 20 0.85 Yes -19 0.89 Yes 51 84.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 225672500 - NM_001290263 DOCK10 1 0.12 0.18 11 -3.1 81.39 45 7.33 Yes 32 0.56 No 0 0 No -29 0.6 No 34 72.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 225677901 - NM_001290263 DOCK10 1 0.12 0.21 13 7.35 82.41 23 6.42 Yes 30 0.36 No 0 0 No -30 0.71 Yes 48 58.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 225681447 - NM_001290263 DOCK10 1 0.07 0.13 8 -4.44 0 13 3.92 No 20 0.21 No 22 0.89 Yes -57 0.44 No 58 37.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 225693539 - NM_001290263 DOCK10 1 0.44 0.74 33 12.07 88.18 41 8.64 Yes 76 0.91 Yes 0 0 No -30 0.38 No 37 72.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 225699339 - NM_001290263 DOCK10 1 1 1.64 61 10.31 91.77 23 5.38 No 56 0.09 No 0 0 No -22 0.77 Yes 48 67.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 225717808 - NM_001290263 DOCK10 1 0.89 2.01 58 4.1 75.89 25 6.39 Yes 12 1.23 Yes 0 0 No -24 0.68 Yes 46 65.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 225719751 - NM_001290263 DOCK10 1 0.1 0.19 11 -3.07 0 14 4.24 No 11 1.32 Yes 0 0 No -23 0.25 No 47 64.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 225725937 - NM_001290263 DOCK10 1 0.11 0.22 12 12.27 87.34 43 3.8 No 27 0.18 No 0 0 No -28 0.71 Yes 42 87.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 225726891 - NM_001290263 DOCK10 1 0.55 1.17 46 4.26 71.36 24 7.36 Yes 11 0.6 No 0 0 No -23 0.56 No 47 68.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 225740872 - NM_001290263 DOCK10 1 0.1 0.21 14 7.13 86.1 20 6.79 Yes 7 1.95 Yes 0 0 No -19 0.52 No 51 43.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 225746896 - NM_001290263 DOCK10 1 0.14 0.33 18 9.11 91.92 34 3.99 No 21 1.5 Yes 0 0 No -33 0.66 No 37 82.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 225751244 - NM_001290263 DOCK10 1 1.1 1.58 59 -0.74 0 40 6.24 Yes 27 0.6 No 27 0.36 Yes -39 0.36 No 35 42.34 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 225758370 - NM_001290263 DOCK10 1 2.66 4.13 69 8.94 82.66 34 5.7 Yes 21 1.17 Yes 27 0.82 Yes -27 0.7 Yes 43 74.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 225784473 - NM_001290263 DOCK10 1 0.18 0.35 18 10.23 92.63 31 7.8 Yes 27 1.47 Yes 0 0 No -23 0.62 No 36 62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 225791545 - NM_001290263 DOCK10 1 0.45 0.97 36 8.54 82.13 29 6.74 Yes 1 0 No 0 0 No -21 0.6 No 49 63.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 117672519 + NM_144658 DOCK11 1 0.51 0.14 8 7.68 71.87 19 4.4 No 13 -1.51 No 0 0 No -18 0.43 No 15 32.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 117672583 + NM_144658 DOCK11 1 0.5 0.14 9 8.21 88.33 25 5.3 No 0 1.51 Yes 0 0 No -24 0.8 Yes 46 76.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 117677455 + NM_144658 DOCK11 1 0.21 0.13 8 4.32 71.27 44 6.81 Yes 63 -4.3 No 21 0.8 Yes -29 0.56 No 41 70.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 117716167 + NM_144658 DOCK11 1 1.33 0.57 29 8.52 80.58 33 6.68 Yes 38 1.3 Yes 0 0 No -32 0.83 Yes 38 89.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 117723716 + NM_144658 DOCK11 1 0.24 0.14 10 7.92 88.38 30 6.31 Yes 7 0.74 No 0 0 No -30 0.32 No 45 55.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 117742198 + NM_144658 DOCK11 1 0.77 0.44 20 0.79 0 39 6.09 Yes 26 0.91 Yes 0 0 No -38 0.93 Yes 32 97.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 117750164 + NM_144658 DOCK11 1 17.15 5.71 72 5.03 65.61 45 6.27 Yes 64 0.57 No 0 0 No -49 0.71 Yes 21 61.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 117810566 + NM_144658 DOCK11 1 0.49 0.28 15 2.52 83.39 18 4.61 No 41 0.84 Yes 0 0 No -25 0.6 No 50 45.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169088763 + NM_004946 DOCK2 1 0.06 0.15 8 6.54 85.59 22 4.63 No 72 1.21 Yes 0 0 No -21 0.78 Yes 49 81.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169097113 + NM_004946 DOCK2 1 1.03 2.54 62 6.58 86.89 27 4.6 No -3 2.15 Yes 0 0 No -26 0.83 Yes 44 81.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169098082 + NM_004946 DOCK2 1 0.04 0.14 9 -14 0 30 6.61 Yes 66 0.61 No 0 0 No -29 0.87 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 169100341 + NM_004946 DOCK2 1 0.08 0.29 16 6.71 89.18 35 6.93 Yes 22 0.48 No 0 0 No -25 0.45 No 45 67.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 169108733 + NM_004946 DOCK2 1 0.2 0.67 32 9.15 85.73 37 5.65 Yes 24 1.61 Yes 31 0.52 Yes -31 0.46 No 34 76.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 169122165 + NM_004946 DOCK2 1 0.05 0.14 8 7.23 83.09 30 6.32 Yes 59 0.61 No 19 0.47 Yes -29 0.85 Yes 41 93.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 169118881 + NM_004946 DOCK2 1 0.04 0.15 9 3 84.41 74 7.64 Yes 61 2.86 Yes 0 0 No -29 0.35 No 37 43.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169122115 + NM_004946 DOCK2 1 0.21 0.71 36 7.33 78.25 22 5.66 Yes 9 0.62 No 0 0 No -21 0.84 Yes 49 91.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 169122165 + NM_004946 DOCK2 1 0.29 0.93 42 7.23 83.09 30 6.32 Yes 59 0.61 No 19 0.47 Yes -29 0.85 Yes 41 93.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 169128153 + NM_004946 DOCK2 1 0.18 0.54 25 9.24 93.47 36 7.28 Yes 23 1.36 Yes 0 0 No -27 0.89 Yes 43 79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169138228 + NM_004946 DOCK2 1 0.17 0.47 29 7.48 91.94 22 4.63 No 46 -2.03 No 0 0 No -21 0.63 No 49 57.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 169139129 + NM_004946 DOCK2 1 0.11 0.25 15 -3.65 0 15 3.87 No 15 0.19 No 0 0 No -27 0.69 Yes 43 77.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 169141039 + NM_004946 DOCK2 1 0.21 0.75 37 -4.15 0 11 4.12 No 14 1.16 Yes 0 0 No -26 0.62 No 44 75.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 169141043 + NM_004946 DOCK2 1 0.03 0.11 7 -16.88 0 15 4.58 No 18 1.14 Yes 0 0 No -30 0.62 No 40 67.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169143217 + NM_004946 DOCK2 1 0.05 0.18 12 -10.62 0 32 5.83 Yes 42 1.31 Yes 0 0 No -22 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169143225 + NM_004946 DOCK2 1 0.03 0.1 7 4.68 0 12 4.24 No 50 1.31 Yes 0 0 No -30 0.79 Yes 40 65.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 169144325 + NM_004946 DOCK2 1 0.1 0.38 24 3.08 79.64 22 6 Yes 63 -5.46 No 0 0 No -21 0.8 Yes 49 76.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 169144412 + NM_004946 DOCK2 1 0.41 1.42 58 1.2 0 17 4.08 No 42 0.75 No 0 0 No -21 0.64 No 49 69.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 169144426 + NM_004946 DOCK2 1 0.08 0.29 17 -1.74 64.86 22 4.8 No 56 0.74 No 0 0 No -21 0.9 Yes 49 71.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 169188500 + NM_004946 DOCK2 1 0.08 0.32 17 6.74 83.99 35 5.83 Yes 31 -0.77 No 27 0.81 Yes -23 0.76 Yes 47 84.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 169191037 + NM_004946 DOCK2 1 1.32 3.97 69 4.47 77.78 27 4.31 No 50 0.99 Yes 0 0 No -26 0.35 No 44 28.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169192435 + NM_004946 DOCK2 1 0.29 0.88 36 0.97 68.05 25 6.82 Yes 12 1.41 Yes 0 0 No -24 0.65 No 36 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 169200158 + NM_004946 DOCK2 1 0.04 0.11 7 6.95 79.69 31 5.88 Yes 18 0.9 Yes 0 0 No -30 0.7 Yes 40 85.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169219526 + NM_004946 DOCK2 1 0.13 0.42 23 4.27 84.78 29 4.51 No 10 0.14 No 0 0 No -28 0.57 No 42 61.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 169231095 + NM_004946 DOCK2 1 0.09 0.32 19 12.22 79.19 30 6 Yes 29 0.95 Yes 0 0 No -29 0.87 Yes 41 92.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169240067 + NM_004946 DOCK2 1 0.15 0.53 29 12.37 93.61 14 5.3 No 37 -1.12 No 0 0 No -26 0.67 Yes 44 81.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 169410902 + NM_004946 DOCK2 1 0.18 0.54 25 6.48 86.39 26 6.4 Yes 13 1.81 Yes 0 0 No -25 0.84 Yes 45 91.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169424977 + NM_004946 DOCK2 1 0.06 0.18 10 8.95 86.85 32 5.35 No 19 0 No 25 0.78 Yes -25 0.56 No 45 51.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 169426811 + NM_004946 DOCK2 1 0.05 0.11 7 1.45 73.44 84 7.49 Yes 8 -2.09 No 0 0 No -23 0.67 Yes 47 80.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 169427499 + NM_004946 DOCK2 1 0.27 0.69 33 10.52 82.76 23 6.71 Yes 10 1.01 Yes 0 0 No -22 0.86 Yes 48 81.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169439044 + NM_004946 DOCK2 1 0.32 0.83 33 6.63 79.13 36 6.85 Yes 11 0.23 No 0 0 No -23 0.77 Yes 47 69.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 169450691 + NM_004946 DOCK2 1 0.43 1.19 48 10.42 95.97 17 5.22 No 29 1.64 Yes 0 0 No -21 0.96 Yes 49 97.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169454867 + NM_004946 DOCK2 1 0.06 0.14 10 -11.53 0 37 6.6 Yes 24 1.49 Yes 0 0 No -36 0.56 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169463408 + NM_004946 DOCK2 1 0.69 1.43 48 8.27 92.04 22 5.29 No 1 0.29 No 0 0 No -22 0.53 No 48 62.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 169482299 + NM_004946 DOCK2 1 0.05 0.14 10 3.65 87.07 16 4.69 No 72 -2.58 No 25 0.44 Yes -24 0.58 No 23 33.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 169483502 + NM_004946 DOCK2 1 0.03 0.1 7 6.28 83.49 15 5.83 Yes 2 0.81 Yes 0 0 No -21 0.47 No 43 60.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169483669 + NM_004946 DOCK2 1 0.11 0.36 16 -14.76 0 15 3.87 No 64 -5.11 No 20 0.89 Yes -14 0.33 No 50 38.75 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 169484168 + NM_004946 DOCK2 1 0.05 0.14 9 5.59 0 33 5.74 Yes 20 1.21 Yes 0 0 No -26 0.68 Yes 44 79.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169501861 + NM_004946 DOCK2 1 0.08 0.17 10 7.8 81.53 42 6.6 Yes 29 0.67 No 0 0 No -29 0.86 Yes 41 87.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 169507174 + NM_004946 DOCK2 1 0.03 0.1 7 2.5 0 11 4.12 No 44 1.51 Yes 0 0 No -56 0.83 Yes 14 95.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169508828 + NM_004946 DOCK2 1 0.08 0.18 10 5.07 77.76 40 6.09 Yes -3 0.34 No 26 0.81 Yes -20 0.48 No 49 47.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 169508932 + NM_004946 DOCK2 1 2.08 4.46 71 8.76 80.8 26 5.29 No 13 0.79 Yes 0 0 No -25 0.94 Yes 45 94.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 62921126 - NM_001330614 DOCK7 1 0.92 0.31 20 0.47 81.91 29 8.03 Yes 16 1.52 Yes 0 0 No -28 0.77 Yes 42 92.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 62926642 - NM_001330614 DOCK7 1 0.65 0.24 16 8.98 95.48 32 4.74 No 11 1.46 Yes 0 0 No -24 0.5 No 47 48.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 62942793 - NM_001330614 DOCK7 1 0.59 0.24 15 4.13 77.77 38 6.07 Yes 47 1.38 Yes 0 0 No -28 0.4 No 33 57.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 63050550 - NM_001330614 DOCK7 1 4.44 1.83 56 7.42 83.56 45 8.1 Yes 32 1.11 Yes 25 0.9 Yes -25 0.89 Yes 26 91.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 63085661 - NM_001330614 DOCK7 1 1.39 0.63 28 -6.8 0 66 6.2 Yes 3 -1.6 No 0 0 No -37 0.66 Yes 33 73.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63085979 - NM_001330614 DOCK7 1 0.36 0.18 10 0.47 0 75 9.71 Yes 62 0.88 Yes 0 0 No -31 0.62 No 39 62.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 63097090 - NM_001330614 DOCK7 1 0.39 0.15 10 -0.68 63.81 19 5.07 No 26 1.23 Yes 19 0.44 Yes -25 0.45 No 45 57.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 63100555 - NM_001330614 DOCK7 1 0.51 0.26 16 4.8 79.39 35 5.56 Yes 5 1.32 Yes 0 0 No -34 0.58 No 36 52.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 63153328 - NM_001330614 DOCK7 1 11.19 1.68 52 6.74 74.66 31 5.92 Yes 18 1.25 Yes 0 0 No -30 0.89 Yes 40 89.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 276993 + NM_203447 DOCK8 1 0.7 0.15 10 8.2 87.64 22 7.14 Yes 9 1.28 Yes 21 0.79 Yes -21 0.92 Yes 49 94.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 280790 + NM_203447 DOCK8 1 1.03 0.31 17 9.42 87.6 23 5.06 No 46 0.59 No 21 0.63 Yes -21 0.89 Yes 49 88.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 285273 + NM_203447 DOCK8 1 0.7 0.18 10 8.72 81.97 29 7.73 Yes 16 1.81 Yes 0 0 No -28 0.72 Yes 42 81.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 287447 + NM_203447 DOCK8 1 0.09 0.13 9 7.03 82.78 23 3.82 No 45 0.46 No 0 0 No -22 0.66 No 48 78.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 307779 + NM_203447 DOCK8 1 0.33 0.9 37 6.86 84.49 34 5.84 Yes 62 -1.79 No 0 0 No -25 0.58 No 45 61.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 308189 + NM_203447 DOCK8 1 0.2 0.51 27 8.15 71.45 30 4.4 No 11 0.64 No 0 0 No -29 0.56 No 41 76.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 311957 + NM_203447 DOCK8 1 0.1 0.25 16 4.97 0 32 5.83 Yes 19 0.82 Yes 27 0.92 Yes -31 0.93 Yes 39 98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 314291 + NM_203447 DOCK8 1 1.97 3.22 62 9.79 84.34 35 6.84 Yes 22 1.66 Yes 34 0.87 Yes -34 0.7 Yes 36 88.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 318121 + NM_203447 DOCK8 1 0.08 0.18 11 5.79 70.98 33 5.74 Yes 76 -4.28 No 0 0 No -26 0.44 No 44 55.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 320069 + NM_203447 DOCK8 1 0.14 0.35 19 3.67 64.1 25 7.14 Yes 12 1.81 Yes 0 0 No -24 0.79 Yes 46 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 338763 + NM_203447 DOCK8 1 0.11 0.19 13 -0.37 66.08 23 4.79 No 55 -2.01 No 0 0 No -22 0.92 Yes 48 93.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 365590 + NM_203447 DOCK8 1 0.53 1.13 44 8.53 95.65 26 5.2 No 50 0.26 No 25 0.84 Yes -25 0.76 Yes 45 89.98 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 368845 + NM_203447 DOCK8 1 0.08 0.17 9 3.01 0 44 6.74 Yes 31 1.52 Yes 0 0 No -44 0.65 No 26 61.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 376210 + NM_203447 DOCK8 1 0.06 0.14 9 -14.87 0 28 7.14 Yes 15 1.92 Yes 0 0 No -27 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 379655 + NM_203447 DOCK8 1 0.19 0.21 10 6.57 89.58 25 6 Yes 12 1.06 Yes 0 0 No -24 0.96 Yes 46 97.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 418073 + NM_203447 DOCK8 1 0.06 0.13 8 2.35 0 14 3.87 No 60 -2.98 No 0 0 No -28 0.65 No 42 73.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 420957 + NM_203447 DOCK8 1 0.11 0.18 10 -7.6 0 12 4.24 No 58 1.68 Yes 0 0 No -46 0.84 Yes 24 95.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 423925 + NM_203447 DOCK8 1 0.41 0.71 36 10.97 96.33 39 7.43 Yes 54 0.67 No 0 0 No -24 0.59 No 46 46.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 424204 + NM_203447 DOCK8 1 0.18 0.32 16 10.2 85.38 61 8.32 Yes 24 1.69 Yes 0 0 No -36 0.78 Yes 34 84.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 433920 + NM_203447 DOCK8 1 0.06 0.17 10 1.48 75.19 23 5.1 No 47 0.84 Yes 0 0 No -22 0.72 Yes 43 41.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 456524 + NM_203447 DOCK8 1 0.5 0.94 39 5.78 89.27 25 5.39 No 43 0.55 No 0 0 No -24 0.92 Yes 46 92.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 464173 + NM_203447 DOCK8 1 0.12 0.29 18 6.51 83.06 23 4.87 No 67 2.14 Yes 0 0 No -23 0.63 No 48 63.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 3493910 - NM_001145165 DOHH 1 1.84 1.04 40 6.71 87.24 27 5.74 Yes 29 1.33 Yes 0 0 No -26 0.82 Yes 44 83.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176931573 - NM_001308235 DOK3 1 0.57 0.44 26 8.58 84.34 30 6 Yes -2 1.42 Yes 0 0 No -29 0.86 Yes 41 86.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176931600 - NM_001308235 DOK3 1 0.69 0.57 32 6.17 88.51 20 5.1 No 7 0.04 No 0 0 No -19 0.78 Yes 51 75.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 176931864 - NM_001308235 DOK3 1 0.33 0.42 24 2.88 72.87 21 5.2 No 69 1 Yes 0 0 No -20 0.88 Yes 50 79.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176931891 - NM_001308235 DOK3 1 0.08 0.11 7 3.34 72.98 21 5.2 No 42 0.99 Yes 0 0 No -54 0.6 No 16 44.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176935541 - NM_001308235 DOK3 1 0.23 0.22 13 -1.53 66.7 27 6.48 Yes 14 1.2 Yes 0 0 No -26 0.91 Yes 44 80.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57506797 - NM_018110 DOK4 1 2.32 0.14 8 2.96 0 23 6.56 Yes 10 2.08 Yes 0 0 No -22 0.92 Yes 48 90.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131844820 + NM_020438 DOLPP1 1 0.72 0.29 19 4.9 80.1 21 5.2 No 8 0.96 Yes 0 0 No -20 0.82 Yes 50 84.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131847298 + NM_020438 DOLPP1 1 0.79 0.35 19 7.32 82.76 19 5.48 No 6 1.51 Yes 21 0.91 Yes -18 0.75 Yes 52 76.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34950748 - NM_017613 DONSON 1 0.27 0.28 18 -8.22 75.05 41 7.23 Yes 28 1.55 Yes 0 0 No -25 0.67 Yes 45 76.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34953694 - NM_017613 DONSON 1 0.1 0.1 7 -8.05 0 16 4 No 60 0.78 Yes 0 0 No -37 0.65 No 33 60.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 34953699 - NM_017613 DONSON 1 0.18 0.18 10 -12.33 64.49 33 5.05 No 55 0.78 Yes 0 0 No -32 0.61 No 38 63.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 34955897 - NM_017613 DONSON 1 0.12 0.13 7 4.89 83.13 43 6.93 Yes 57 0.73 No 0 0 No -41 0.36 No 28 42.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 34957033 - NM_017613 DONSON 1 0.38 0.42 21 7.25 80 24 5.48 No 69 0.2 No 0 0 No -23 0.91 Yes 47 91.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 34958367 - NM_017613 DONSON 1 0.4 0.32 15 7.65 82.13 46 7.6 Yes 16 1.15 Yes 28 0.85 Yes -28 0.76 Yes 42 77.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34959732 - NM_017613 DONSON 1 0.19 0.14 8 4.58 89.88 35 5.7 Yes 44 0.42 No 0 0 No -22 0.67 Yes 41 48.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 83784986 + NM_015018 DOPEY1 1 1.57 0.14 9 2.36 74.9 60 7.62 Yes 7 1.35 Yes 0 0 No -30 0.28 No 27 52.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 83806430 + NM_015018 DOPEY1 1 1.56 0.13 8 4.55 79.47 46 4.8 No 75 -3.17 No 0 0 No -27 0.61 No 43 63.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 83806453 + NM_015018 DOPEY1 1 1.44 0.11 7 -0.67 0 28 5.61 Yes 15 0.42 No 0 0 No -27 0.96 Yes 43 91.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 83810505 + NM_015018 DOPEY1 1 0.8 0.26 15 3.08 78.31 16 5.16 No 3 0.54 No 0 0 No -20 0.58 No 50 41.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 83819978 + NM_015018 DOPEY1 1 1.11 0.26 14 7.51 77.6 27 7.01 Yes 44 0.6 No 0 0 No -26 0.84 Yes 44 86.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 83823045 + NM_015018 DOPEY1 1 0.35 0.1 7 -1.67 0 23 5.28 No 57 0.32 No 18 0.46 Yes -22 0.75 Yes 48 67.1 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 83849903 + NM_015018 DOPEY1 1 0.41 0.22 11 4.94 78.51 26 6.04 Yes 13 0.8 Yes 30 0.76 Yes -25 0.92 Yes 45 91.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 83853806 + NM_015018 DOPEY1 1 1.11 0.35 21 5.98 75.33 17 4.16 No 27 0.77 Yes 0 0 No -28 0.32 No 42 54.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 83869013 + NM_015018 DOPEY1 1 0.31 0.13 8 6.98 83.41 29 5.26 No 69 0.14 No 0 0 No -24 0.52 No 46 39.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 83869820 + NM_015018 DOPEY1 1 1.99 0.54 31 3.28 87.54 33 5.99 Yes 20 1.07 Yes 0 0 No -26 0.35 No 38 44.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 83869823 + NM_015018 DOPEY1 1 1.77 0.5 25 0.37 80.9 36 6.15 Yes 23 1.07 Yes 0 0 No -25 0.33 No 35 44.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 83874378 + NM_015018 DOPEY1 1 25.32 8.22 72 14.06 92.73 24 5.48 No 11 0.6 No 23 0.67 Yes -23 0.71 Yes 47 76.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 37634479 + NM_001320714 DOPEY2 1 2.61 0.11 7 11.15 96.13 21 5.07 No 14 0.49 No 0 0 No -23 0.71 Yes 44 74.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 37660381 + NM_001320714 DOPEY2 1 2.47 0.15 10 8.63 94.25 20 5.1 No 7 0.78 Yes 0 0 No -19 0.78 Yes 51 85.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2188195 + NM_032482 DOT1L 1 0.13 0.25 14 8.69 88.7 26 4.59 No 13 0.26 No 26 0.84 Yes -26 0.83 Yes 44 89.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2190089 + NM_032482 DOT1L 1 0.07 0.14 8 9.41 83.96 24 5.38 No 52 -1.08 No 0 0 No -22 0.85 Yes 48 92.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2191082 + NM_032482 DOT1L 1 0.71 1.29 53 7.35 79.16 43 7.26 Yes 30 0.38 No 27 0.56 Yes -22 0.66 No 48 51.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 2191085 + NM_032482 DOT1L 1 0.19 0.32 18 2.96 80.96 46 7.46 Yes 33 0.38 No 0 0 No -25 0.68 Yes 45 41.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 2191148 + NM_032482 DOT1L 1 0.06 0.11 8 3.51 79.45 24 4.86 No 33 0.3 No 0 0 No -20 0.56 No 53 37.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2202735 + NM_032482 DOT1L 1 2.63 2.31 61 0.02 79.63 21 6.68 Yes 46 0.83 Yes 0 0 No -31 0.69 Yes 39 70.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2202747 + NM_032482 DOT1L 1 0.38 0.32 21 -1.3 0 15 4.58 No 58 0.83 Yes 0 0 No -43 0.68 Yes 27 74.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2205314 + NM_032482 DOT1L 1 0.13 0.18 11 2.61 66.05 38 7.62 Yes 25 0.9 Yes 0 0 No -37 0.65 No 33 67.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 2205374 + NM_032482 DOT1L 1 0.1 0.15 7 6.24 0 21 4.58 No 8 1.46 Yes 0 0 No -20 0.92 Yes 50 95.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2208633 + NM_032482 DOT1L 1 0.13 0.15 8 6.74 89.97 26 5.66 Yes 47 1.62 Yes 0 0 No -25 0.91 Yes 45 84.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2208652 + NM_032482 DOT1L 1 0.14 0.18 11 7.57 85.92 23 4.9 No 66 1.63 Yes 0 0 No -21 0.4 No 49 51.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 2210149 + NM_032482 DOT1L 1 0.41 0.53 21 7.08 92.09 24 5.29 No 11 1.05 Yes 0 0 No -23 0.96 Yes 47 97.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2210401 + NM_032482 DOT1L 1 0.1 0.11 7 -6.4 79.08 22 7.09 Yes 9 1 Yes 0 0 No -21 0.93 Yes 49 93.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2210407 + NM_032482 DOT1L 1 0.14 0.19 12 -10.3 0 12 3.87 No 15 0.97 Yes 0 0 No -27 0.91 Yes 43 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2213887 + NM_032482 DOT1L 1 0.09 0.11 7 -0.33 63.52 23 6.07 Yes 54 1.47 Yes 24 0.88 Yes -22 0.8 Yes 48 49.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 2222183 + NM_032482 DOT1L 1 0.24 0.25 16 8.19 77.55 22 5.77 Yes NA NA NA 0 0 No -30 0.69 Yes 40 58.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 2222274 + NM_032482 DOT1L 1 0.43 0.46 23 6.35 83.82 34 4.41 No NA NA NA 0 0 No -29 0.46 No 41 43.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2223363 + NM_032482 DOT1L 1 0.68 0.74 37 8.97 85.56 25 5.29 No 12 0.73 No 0 0 No -24 0.88 Yes 46 75.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2227361 + NM_032482 DOT1L 1 0.21 0.17 11 8.96 89.48 23 7.56 Yes 10 1.74 Yes 22 0.94 Yes -22 0.75 Yes 48 83.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2227735 + NM_032482 DOT1L 1 2.12 1.58 51 12.83 93.61 29 5.83 Yes 16 0.57 No 28 0.81 Yes -28 0.69 Yes 43 56.7 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 118968636 - NM_001382 DPAGT1 1 2.05 1.4 52 7.98 90.56 34 5.84 Yes 68 -3.4 No 24 0.51 Yes -30 0.48 No 40 62.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 118971461 - NM_001382 DPAGT1 1 0.54 0.44 24 -0.33 58.26 82 9.27 Yes 69 1.31 Yes 0 0 No -21 0.34 No 16 45.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 118971538 - NM_001382 DPAGT1 1 0.25 0.21 12 6.13 74.76 19 5 No 58 -2.93 No 0 0 No -23 0.59 No 42 52.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118971588 - NM_001382 DPAGT1 1 0.37 0.28 15 -5.44 63.5 20 4.73 No 61 -5.57 No 20 0.89 Yes -20 0.83 Yes 50 31.64 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 118971752 - NM_001382 DPAGT1 1 0.13 0.11 8 -6.21 0 10 3.87 No 9 1.11 Yes 20 0.7 Yes -57 0.86 Yes 13 83.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 118971758 - NM_001382 DPAGT1 1 0.32 0.28 16 1.47 77.04 73 8.61 Yes 3 1.1 Yes 33 0.88 Yes -51 0.73 Yes 19 88.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 103356769 + NM_001329742 DPCD 1 0.44 0.14 7 9.4 82.08 30 6 Yes 25 0.23 No 0 0 No -29 0.57 No 41 66.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65101902 + NM_001330308 DPF2 1 0.11 0.15 11 1.28 79.84 24 4.63 No 33 -3.17 No 0 0 No -26 0.83 Yes 44 79.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65117870 + NM_001330308 DPF2 1 0.07 0.11 7 3.28 0 73 8.89 Yes 71 0.77 Yes 0 0 No -46 0.11 No 33 18.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65119157 + NM_001330308 DPF2 1 0.07 0.11 8 -1.1 0 27 7.81 Yes 14 2.29 Yes 0 0 No -26 0.89 Yes 44 92.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1942692 + NM_001346576 DPH1 1 0.64 0.25 15 5.22 83.86 26 6.78 Yes 52 -1.6 No 0 0 No -29 0.79 Yes 41 91.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 44437331 + NM_001319170 DPH2 1 0.51 0.72 34 6.95 84.59 25 5.54 No 12 0.23 No 24 0.8 Yes -24 0.85 Yes 46 68.68 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 44437592 + NM_001319170 DPH2 1 0.17 0.18 10 2.23 76.46 25 5.57 Yes 12 0.53 No 0 0 No -24 0.65 No 46 82.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 44438099 + NM_001319170 DPH2 1 0.3 0.44 21 4.52 72.93 18 4.69 No 19 1.33 Yes 0 0 No -37 0.5 No 33 75.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 16305733 - NM_001047434 DPH3 1 0.48 0.28 19 -2.22 0 32 6.93 Yes 19 0.95 Yes 0 0 No -31 0.84 Yes 39 88.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 16305737 - NM_001047434 DPH3 1 138.46 78.08 72 5.96 84.96 28 6.63 Yes 15 0.96 Yes 27 0.91 Yes -27 0.87 Yes 43 88.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 101456188 - NM_001077395 DPH5 1 1116.73 144.51 72 6.72 85.17 28 5.29 No 58 1.62 Yes 27 0.6 Yes -21 0.58 No 49 78.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 101456188 - NM_001077395 DPH5 1 140.28 18.14 72 6.72 85.17 28 5.29 No 58 1.62 Yes 27 0.6 Yes -21 0.58 No 49 78.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 101456188 - NM_001077395 DPH5 1 2.87 0.35 20 6.72 85.17 28 5.29 No 58 1.62 Yes 27 0.6 Yes -21 0.58 No 49 78.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 101456188 - NM_001077395 DPH5 1 3.37 0.43 22 6.72 85.17 28 5.29 No 58 1.62 Yes 27 0.6 Yes -21 0.58 No 49 78.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 101458311 - NM_001077395 DPH5 1 0.31 0.38 24 -7.14 0 18 4.36 No 60 -5.06 No 20 0.73 Yes -17 0.59 No 17 39.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 101467101 - NM_001077395 DPH5 1 6.38 6.76 72 6 88.41 17 5.48 No 47 1.08 Yes 25 0.34 Yes -23 0.33 No 47 60.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 101467101 - NM_001077395 DPH5 1 5.89 6.21 72 6 88.41 17 5.48 No 47 1.08 Yes 25 0.34 Yes -23 0.33 No 47 60.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 101471620 - NM_001077395 DPH5 1 0.75 0.79 38 6.69 79.59 17 5.63 Yes 66 -5.68 No 0 0 No -25 0.4 No 54 66.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 101477206 - NM_001077395 DPH5 1 0.25 0.26 13 6.06 78.09 15 6.16 Yes 50 0.61 No 24 0.35 Yes -24 0.3 No 44 41.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 101484828 - NM_001077395 DPH5 1 0.14 0.18 10 8.86 92.71 21 4.22 No 8 1.25 Yes 0 0 No -30 0.84 Yes 40 71.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 101486711 - NM_001077395 DPH5 1 0.12 0.11 8 4.46 82.56 20 4.57 No 63 0.87 Yes 0 0 No -19 0.89 Yes 51 64.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 101488886 - NM_001077395 DPH5 1 0.34 0.38 19 9.01 96.25 20 6.29 Yes 7 1.05 Yes 19 0.68 Yes -19 0.61 No 51 49.55 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 35675039 - NM_080650 DPH6 1 0.28 0.14 9 11.54 100 56 7.75 Yes 52 0.77 No 0 0 No -32 0.48 No 15 35.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 35703092 - NM_080650 DPH6 1 0.28 0.13 8 0.78 0 15 3.87 No 8 1.51 Yes 26 0.87 Yes -42 0.38 No 34 70.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 35722169 - NM_080650 DPH6 1 0.34 0.17 10 12.02 88.9 37 7.34 Yes 24 0.98 Yes 0 0 No -36 0.9 Yes 34 91.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 35782399 - NM_080650 DPH6 1 2.72 1 42 13.15 89.33 66 7.77 Yes 53 2.11 Yes 23 0.06 Yes -45 0.93 Yes 25 95.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 35814480 - NM_080650 DPH6 1 1.88 0.76 36 9.8 94.03 33 7.27 Yes 20 1.23 Yes 32 0.79 Yes -32 0.79 Yes 38 72.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140450257 - NM_001346384 DPH7 1 0.36 0.15 9 4.48 72.68 32 6.56 Yes 61 1.05 Yes 0 0 No -31 0.81 Yes 39 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140451268 - NM_001346384 DPH7 1 1.03 0.46 27 4.48 74.25 17 5.26 No 57 1.29 Yes 28 0.81 Yes -28 0.9 Yes 42 94.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140451317 - NM_001346384 DPH7 1 1.19 0.54 28 8.63 95.21 21 6.71 Yes 8 1.32 Yes 0 0 No -20 0.97 Yes 50 97.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140452822 - NM_001346384 DPH7 1 0.52 0.22 12 8.8 83.64 30 5.53 No 75 1.02 Yes 0 0 No -29 0.69 Yes 41 65.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 140453483 - NM_001346384 DPH7 1 0.82 0.38 19 5.82 78.37 37 7.8 Yes 24 1.05 Yes 0 0 No -36 0.55 No 34 73.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140458663 - NM_001346384 DPH7 1 1.71 0.75 34 5.54 81.88 26 5.2 No 13 1.88 Yes 0 0 No -25 0.93 Yes 45 95.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140468491 - NM_001346384 DPH7 1 0.42 0.19 13 4.91 92.5 20 4.89 No 7 1.05 Yes 0 0 No -19 0.59 No 51 70.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140468928 - NM_001346384 DPH7 1 1.64 0.82 35 2.74 84.05 22 4.48 No 30 0.43 No 0 0 No -22 0.89 Yes 48 89.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140469299 - NM_001346384 DPH7 1 4.89 1.53 52 4.85 90.33 22 4.9 No 67 1.14 Yes 21 0.93 Yes -21 0.89 Yes 49 92.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140470345 - NM_001346384 DPH7 1 0.88 0.25 15 -8.46 70.17 34 6 Yes 39 0.14 No 27 0.78 Yes -33 0.69 Yes 37 63.11 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 140470347 - NM_001346384 DPH7 1 1.57 0.49 27 0.55 66.93 32 5.84 Yes 37 0.15 No 27 0.78 Yes -31 0.7 Yes 39 62.25 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 140470376 - NM_001346384 DPH7 1 0.48 0.13 7 1.22 0 21 4.58 No 72 1.21 Yes 27 0.78 Yes -25 0.5 No 45 67.01 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 49562425 - NM_001317034 DPM1 1 0.05 0.22 11 2.19 68.97 45 6.66 Yes 56 0.66 No 18 0.51 Yes -21 0.92 Yes 49 87.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 49567841 - NM_001317034 DPM1 1 0.1 0.36 24 5.41 88.89 30 9.57 Yes 17 1.4 Yes 0 0 No -29 0.69 Yes 41 57.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 130697590 - NM_003863 DPM2 1 0.05 0.11 7 0.55 0 25 6.67 Yes 12 1.98 Yes 0 0 No -33 0.85 Yes 37 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130697594 - NM_003863 DPM2 1 1.48 2.65 58 6.1 78.17 21 6.42 Yes 8 1.98 Yes 0 0 No -29 0.91 Yes 41 92.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155112748 - NM_153741 DPM3 1 8 2.94 60 10.36 93.09 33 6.24 Yes 47 0.97 Yes 32 0.78 Yes -32 0.88 Yes 38 88.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66249638 + NM_130443 DPP3 1 0.31 0.21 11 -0.35 57.47 38 6.15 Yes 45 -4.57 No 20 0.72 Yes -23 0.66 No 47 53.1 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 66249650 + NM_130443 DPP3 1 0.6 0.35 20 -3.58 0 21 4.54 No 57 -5.33 No 20 0.72 Yes -17 0.52 No 50 34.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 66249666 + NM_130443 DPP3 1 112.8 66.88 72 4.29 83.48 21 4.71 No 73 -6.34 No 20 0.72 Yes -20 0.63 No 50 63.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 66249759 + NM_130443 DPP3 1 0.21 0.14 8 9.87 79.9 28 5.83 Yes 15 0.45 No 27 0.7 Yes -27 0.76 Yes 43 66.37 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 66250521 + NM_130443 DPP3 1 0.26 0.38 22 8.28 94.29 55 7.54 Yes 42 1.97 Yes 25 0.74 Yes -25 0.65 No 16 72.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 66250541 + NM_130443 DPP3 1 0.16 0.24 14 4.16 86.51 25 5.17 No 62 1.97 Yes 0 0 No -24 0.82 Yes 46 80.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66251089 + NM_130443 DPP3 1 0.3 0.46 24 8.81 81.95 28 5.83 Yes 35 0.49 No 0 0 No -27 0.83 Yes 43 85.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66258974 + NM_130443 DPP3 1 0.25 0.46 24 -0.36 0 18 4.35 No 19 2.01 Yes 0 0 No -17 0.78 Yes 39 47.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 66262823 + NM_130443 DPP3 1 0.38 0.56 32 -14.43 0 16 3.6 No 69 -5.45 No 21 0.72 Yes -16 0.41 No 55 40.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 66262841 + NM_130443 DPP3 1 0.47 0.64 30 0.54 0 9 3.87 No 76 -3.48 No 0 0 No -20 0.52 No 43 60.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 66272058 + NM_130443 DPP3 1 0.23 0.26 16 2.93 70.57 15 6.4 Yes 2 1.46 Yes 26 0.4 Yes -24 0.65 No 46 49.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 140006450 - NM_013379 DPP7 1 0.1 0.21 12 1.66 76.93 18 4.09 No -1 0.92 Yes 0 0 No -26 0.69 Yes 44 49.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 140007931 - NM_013379 DPP7 1 2.03 1.51 49 -3.54 55.82 25 5.17 No 26 2.42 Yes 0 0 No -38 0.71 Yes 32 59.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 140008168 - NM_013379 DPP7 1 2.79 2.01 58 8.05 88.89 18 4.9 No 54 2.16 Yes 23 0.75 Yes -23 0.74 Yes 47 63.24 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 140008466 - NM_013379 DPP7 1 0.07 0.1 7 -4.43 57.93 18 4.4 No 21 0.37 No 0 0 No -33 0.49 No 37 26.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140008831 - NM_013379 DPP7 1 4.44 4.57 66 3.96 0 22 9.38 Yes 9 1.14 Yes 28 0.52 Yes -21 0.88 Yes 49 83.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 65739333 - NM_017743 DPP8 1 0.63 0.43 22 2.59 0 15 4.58 No 44 1.47 Yes 0 0 No -56 0.65 No 14 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 65764255 - NM_017743 DPP8 1 0.16 0.11 7 4.75 78.49 29 6.01 Yes 47 -4.02 No 0 0 No -28 0.57 No 42 68.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 65772718 - NM_017743 DPP8 1 0.37 0.35 18 6.45 72.46 26 5.19 No 54 1.6 Yes 0 0 No -30 0.4 No 40 59.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65778129 - NM_017743 DPP8 1 1.08 0.75 34 7.68 86.16 20 6.71 Yes 7 1.27 Yes 0 0 No -29 0.52 No 51 81.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 65788620 - NM_017743 DPP8 1 0.4 0.39 22 3.51 75.73 22 4.85 No 56 1.33 Yes 0 0 No -21 0.74 Yes 49 56.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 65788636 - NM_017743 DPP8 1 0.36 0.35 19 1.73 66.28 53 7.81 Yes 71 1.74 Yes 0 0 No -32 0.57 No 37 53.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65804447 - NM_017743 DPP8 1 1.47 1.15 41 9.03 91.39 20 7.28 Yes 7 1.47 Yes 28 0.72 Yes -19 0.55 No 51 66.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 65808130 - NM_017743 DPP8 1 13.83 3.14 67 1.89 75.76 39 6.29 Yes 76 0.8 Yes 25 0.68 Yes -27 0.77 Yes 43 60.08 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 4679982 - NM_139159 DPP9 1 0.44 0.65 30 4.47 77.43 50 8.65 Yes 37 1.78 Yes 25 0.86 Yes -49 0.5 No 21 88.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 4689696 - NM_139159 DPP9 1 2.93 4.9 71 4.83 86.92 18 4.86 No 18 -2.17 No 21 0.54 Yes -17 0.41 No 53 38.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 4689711 - NM_139159 DPP9 1 0.06 0.1 7 -20.17 0 12 2.63 No 3 -1.26 No 21 0.54 Yes -15 0.39 No 21 44.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 4690325 - NM_139159 DPP9 1 0.06 0.11 8 7.48 89.16 23 5.39 No 10 0.96 Yes 0 0 No -22 0.88 Yes 48 84.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4690437 - NM_139159 DPP9 1 0.08 0.14 9 7.41 83.27 25 4.98 No 61 0.91 Yes 0 0 No -24 0.93 Yes 46 97.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4694802 - NM_139159 DPP9 1 0.46 0.71 38 6.62 81.54 28 6.3 Yes 50 2.2 Yes 0 0 No -30 0.58 No 43 78.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 4700286 - NM_139159 DPP9 1 0.16 0.32 17 -0.12 0 21 7.33 Yes 13 1.38 Yes 21 0.76 Yes -25 0.93 Yes 45 95.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 4702162 - NM_139159 DPP9 1 0.14 0.19 11 -3.21 0 14 3.87 No 50 1.16 Yes 0 0 No -33 0.84 Yes 40 80.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4715739 - NM_139159 DPP9 1 1.35 1.42 50 1.56 72.89 32 7.07 Yes 19 1.63 Yes 23 0.9 Yes -31 0.71 Yes 39 79.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 4716165 - NM_139159 DPP9 1 2.05 2.18 61 7.8 81.1 31 7.06 Yes 18 1.55 Yes 30 0.91 Yes -30 0.97 Yes 40 97.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 4717210 - NM_139159 DPP9 1 0.4 0.46 27 8.98 94.53 36 7 Yes 23 2.12 Yes 0 0 No -35 0.72 Yes 35 90.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4719313 - NM_139159 DPP9 1 0.16 0.14 10 4.13 84.95 27 4.48 No 66 1.92 Yes 0 0 No -27 0.45 No 43 59.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 4719337 - NM_139159 DPP9 1 0.45 0.46 26 3.72 83.56 59 6.18 Yes 42 1.93 Yes 27 0.77 Yes -31 0.31 No 39 48.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 4719578 - NM_139159 DPP9 1 0.16 0.21 11 4.19 82.92 36 6.24 Yes 23 1.08 Yes 0 0 No -35 0.73 Yes 35 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4722317 - NM_139159 DPP9 1 3.45 3.53 68 10.06 77.22 19 6.24 Yes NA NA NA 32 0.44 Yes -32 0.89 Yes 38 91.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 34977730 - NM_015283 DPY19L1 1 0.17 0.1 7 -10.95 78.25 35 6.02 Yes 68 1.07 Yes 0 0 No -26 0.69 Yes 44 61.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 35029060 - NM_015283 DPY19L1 1 2.55 1.13 45 6.72 79.84 26 4.99 No 13 1.11 Yes 0 0 No -25 0.93 Yes 45 94.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 102894563 - NR_027768 DPY19L2P2 1 8.6 0.36 20 8.33 84.12 42 6.93 Yes 29 0.73 No 0 0 No -41 0.69 Yes 29 96.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 32906658 + NM_001172774 DPY19L3 1 0.63 0.29 17 4.32 83.02 20 4.89 No 7 0.27 No 0 0 No -23 0.95 Yes 47 94.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 32910091 + NM_001172774 DPY19L3 1 0.87 0.44 24 3.01 0 32 10.86 Yes 34 0.56 No 0 0 No -31 0.89 Yes 39 91.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 32918902 + NM_001172774 DPY19L3 1 3.17 1.49 51 3.01 0 37 8.59 Yes 49 0.96 Yes 36 0.43 Yes -36 0.48 No 34 50.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 32926607 + NM_001172774 DPY19L3 1 0.28 0.15 10 5.37 79.58 20 5.08 No 62 0.57 No 0 0 No -31 0.7 Yes 39 63.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 32928150 + NM_001172774 DPY19L3 1 0.29 0.17 9 5.99 87.98 44 5.72 Yes 74 1.13 Yes 0 0 No -20 0.44 No 50 53.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 32929848 + NM_001172774 DPY19L3 1 5.3 2.14 55 8.1 93.77 31 5.52 No 19 0 No 25 0.48 Yes -31 0.86 Yes 39 88.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 32930022 + NM_001172774 DPY19L3 1 4.74 1.9 59 2.02 0 37 8.09 Yes 74 0.48 No 0 0 No -39 0.33 No 34 61.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 32930725 + NM_001172774 DPY19L3 1 4.42 1.9 52 7.38 82.49 39 5.18 No 26 2.03 Yes 0 0 No -38 0.37 No 32 56.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 32947012 + NM_001172774 DPY19L3 1 0.58 0.22 11 8.81 98.16 45 5.24 No 40 0.55 No 0 0 No -33 0.56 No 37 68.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 32947367 + NM_001172774 DPY19L3 1 0.55 0.24 15 3.63 0 31 7.26 Yes 18 1.24 Yes 0 0 No -30 0.57 No 40 65.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 32954240 + NM_001172774 DPY19L3 1 0.26 0.13 9 4.26 81.92 20 5.2 No 7 0.86 Yes 28 0.68 Yes -19 0.91 Yes 51 89.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 32958379 + NM_001172774 DPY19L3 1 22.02 7.35 72 3.38 61.96 30 5.58 Yes 17 0.79 Yes 23 0.69 Yes -36 0.58 No 34 74.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 32961280 + NM_001172774 DPY19L3 1 1.08 0.44 27 11.26 99.17 18 5.32 No 5 1.32 Yes 0 0 No -23 0.83 Yes 47 58.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 32971946 + NM_001172774 DPY19L3 1 2.37 0.89 37 10.47 88.99 33 6.24 Yes 20 1.08 Yes 32 0.9 Yes -32 0.78 Yes 38 87.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 95756570 + NM_181787 DPY19L4 1 1.63 0.44 22 8.95 74.67 28 5.87 Yes 72 1.07 Yes 20 0.74 Yes -20 0.41 No 50 76.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 95756712 + NM_181787 DPY19L4 1 8.44 2.15 57 5.63 79.77 31 4.64 No 35 1.26 Yes 26 0.6 Yes -26 0.49 No 45 57.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 95765713 + NM_181787 DPY19L4 1 1.31 0.35 21 11.55 87.23 38 5.55 No 25 1.08 Yes 0 0 No -27 0.61 No 33 44.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 95768268 + NM_181787 DPY19L4 1 0.75 0.22 14 1.3 0 55 7.02 Yes 42 0.91 Yes 0 0 No -30 0.33 No 34 69.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 95773929 + NM_181787 DPY19L4 1 2.89 0.36 20 1.47 86.2 34 5.83 Yes 21 1.08 Yes 0 0 No -27 0.71 Yes 43 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 95773929 + NM_181787 DPY19L4 1 5.59 0.68 31 1.47 86.2 34 5.83 Yes 21 1.08 Yes 0 0 No -27 0.71 Yes 43 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 95786826 + NM_181787 DPY19L4 1 1.43 0.33 21 4.64 84.41 36 11.45 Yes 37 1.68 Yes 0 0 No -35 0.8 Yes 35 72.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 95791294 + NM_181787 DPY19L4 1 1.36 0.38 19 5.66 78.54 38 6.58 Yes 8 1.72 Yes 0 0 No -37 0.66 No 33 95.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 32254799 - NM_001321210 DPY30 1 0.05 0.13 7 -12.35 0 13 4 No 42 0.98 Yes 0 0 No -33 0.89 Yes 37 79.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32258370 - NM_001321210 DPY30 1 0.18 0.42 20 3.28 0 35 6.11 Yes 22 0.94 Yes 0 0 No -34 0.84 Yes 36 96.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32262928 - NM_001321210 DPY30 1 0.06 0.14 10 3.91 82.65 32 7.57 Yes 19 0.64 No 0 0 No -27 0.37 No 43 67.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32263626 - NM_001321210 DPY30 1 0.07 0.17 11 7.68 87.15 23 5.06 No 7 0.31 No 0 0 No -22 0.41 No 48 62.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32264591 - NM_001321210 DPY30 1 0.84 1.14 47 5.79 82.18 12 5.55 No 50 -1.45 No 26 0.89 Yes -31 0.58 No 46 72.69 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 26447655 + NM_001197293 DPYSL2 1 0.32 0.31 18 9.13 89.12 25 7.89 Yes 33 0.4 No 0 0 No -24 0.72 Yes 41 52.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 93815475 + NM_001938 DR1 1 1.39 3.86 64 4.23 71.98 52 5.67 Yes -4 0.74 No 0 0 No -19 0.63 No 51 77.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 93823954 + NM_001938 DR1 1 0.04 0.18 11 10.56 88.44 20 6.24 Yes 7 1.12 Yes 0 0 No -19 0.87 Yes 51 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93826034 + NM_001938 DR1 1 0.32 1.24 48 0.82 0 23 7.13 Yes 49 1.4 Yes 27 0.58 Yes -23 0.4 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 93826040 + NM_001938 DR1 1 0.12 0.51 25 1.5 0 29 7.52 Yes 55 1.4 Yes 27 0.58 Yes -29 0.36 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 93826041 + NM_001938 DR1 1 0.04 0.17 11 4.36 0 30 7.59 Yes 56 1.4 Yes 27 0.58 Yes -30 0.36 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 102283877 + NM_018370 DRAM1 1 6.51 7.78 72 2.19 83.04 49 8.25 Yes 36 2.03 Yes 0 0 No -48 0.87 Yes 22 93.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102283883 + NM_018370 DRAM1 1 0.97 1.13 43 -5.18 0 9 3.87 No 42 2.02 Yes 0 0 No -54 0.85 Yes 16 95.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102291827 + NM_018370 DRAM1 1 0.14 0.33 18 2.63 0 37 7.26 Yes 49 0.85 Yes 0 0 No -41 0.51 No 29 44.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 102292859 + NM_018370 DRAM1 1 0.46 1.24 44 5.89 79.21 34 7.33 Yes 21 1.49 Yes 0 0 No -33 0.51 No 37 78.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 102297125 + NM_018370 DRAM1 1 0.23 0.4 24 8.31 91.24 30 8.1 Yes 17 1.41 Yes 0 0 No -29 0.86 Yes 41 93.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102304719 + NM_018370 DRAM1 1 0.55 1.32 45 -4.45 0 16 4.24 No 72 0.47 No 0 0 No -15 0.47 No 55 60.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 102307194 + NM_018370 DRAM1 1 0.06 0.14 9 1.38 61.57 22 4.96 No 9 0.34 No 0 0 No -22 0.77 Yes 48 82.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 102307942 + NM_018370 DRAM1 1 0.05 0.14 10 -4.21 0 10 5.09 No -3 1.46 Yes 18 0.5 Yes -9 0.78 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 102312242 + NM_018370 DRAM1 1 0.07 0.14 7 7.96 83.34 19 5.76 Yes 68 -3.07 No 0 0 No -29 0.56 No 41 44.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 102314995 + NM_018370 DRAM1 1 0.03 0.11 8 -15.22 64.46 41 9.12 Yes 28 0.96 Yes 0 0 No -40 0.5 No 30 72.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 111662304 - NM_178454 DRAM2 1 0.04 0.1 7 6.66 75.54 43 6.68 Yes 58 0.3 No 28 0.49 Yes -42 0.55 No 44 61.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 111662351 - NM_178454 DRAM2 1 0.08 0.17 11 4.95 77.27 39 6.06 Yes 74 0.44 No 0 0 No -27 0.51 No 43 64.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 111662584 - NM_178454 DRAM2 1 0.46 0.49 28 -0.37 0 15 5.09 No 2 1.26 Yes 29 0.83 Yes -27 0.67 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 111663214 - NM_178454 DRAM2 1 0.15 0.29 14 6.41 72.27 27 5.74 Yes 14 0.38 No 0 0 No -26 0.8 Yes 44 79.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 111663214 - NM_178454 DRAM2 1 0.12 0.22 13 6.41 72.27 27 5.74 Yes 14 0.38 No 0 0 No -26 0.8 Yes 44 79.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 111665266 - NM_178454 DRAM2 1 1.64 3 63 8.12 90.66 24 5.19 No 11 1.2 Yes 23 0.96 Yes -23 0.8 Yes 47 93.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 111665266 - NM_178454 DRAM2 1 4.17 7.47 71 8.12 90.66 24 5.19 No 11 1.2 Yes 23 0.96 Yes -23 0.8 Yes 47 93.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 111668273 - NM_178454 DRAM2 1 11.19 9.93 72 7.02 82.73 48 6.52 Yes 60 0.96 Yes 29 0.68 Yes -29 0.44 No 41 45.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 111673631 - NM_178454 DRAM2 1 0.11 0.14 9 2.5 84.41 22 5.66 Yes 9 0.78 Yes 0 0 No -26 0.39 No 44 52.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65687817 + NM_006442 DRAP1 1 0.06 0.22 11 -3.65 0 33 5.23 No 3 0.44 No 0 0 No -26 0.72 Yes 44 66.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 65688018 + NM_006442 DRAP1 1 0.31 0.97 42 -1.67 0 11 4.58 No NA NA NA 25 0.62 Yes -18 0.42 No 56 30.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 65688850 + NM_006442 DRAP1 1 0.09 0.19 9 9.64 83.22 44 7.67 Yes 64 2.24 Yes 0 0 No -31 0.53 No 27 43.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 31801179 + NM_004147 DRG1 1 0.13 0.22 13 3.01 0 32 5.81 Yes 16 0.64 No 0 0 No -32 0.52 No 39 56.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 31817293 + NM_004147 DRG1 1 0.08 0.18 9 7.6 87 30 6.86 Yes 17 1.6 Yes 29 0.94 Yes -29 0.95 Yes 41 96.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 31817293 + NM_004147 DRG1 1 0.82 1.99 57 7.6 87 30 6.86 Yes 17 1.6 Yes 29 0.94 Yes -29 0.95 Yes 41 96.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 31820667 + NM_004147 DRG1 1 0.07 0.17 9 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -26 0.82 Yes 44 89.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 17995231 + NM_001388 DRG2 1 0.25 0.22 12 5.81 80.31 14 4.84 No 1 1.57 Yes 26 0.69 Yes -23 0.65 No 47 86.86 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 18004764 + NM_001388 DRG2 1 0.25 0.22 14 1.26 67.47 50 7.34 Yes -1 0.86 Yes 29 0.56 Yes -46 0.36 No 21 46.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 18004798 + NM_001388 DRG2 1 0.86 0.83 45 -5.25 65.61 9 5.1 No 33 -1.2 No 29 0.56 Yes -21 0.81 Yes 49 48.18 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 18004808 + NM_001388 DRG2 1 1.01 0.97 39 -11.61 0 18 4.33 No 43 -1.83 No 29 0.56 Yes -17 0.8 Yes 53 82.79 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 18007857 + NM_001388 DRG2 1 0.45 0.6 24 1.6 74.05 20 4.9 No 38 -3.95 No 18 0.27 Yes -19 0.58 No 51 37.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 18007873 + NM_001388 DRG2 1 1.18 1.47 50 7.73 83.39 19 5 No 54 -3.33 No 18 0.27 Yes -18 0.34 No 52 61.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 18010386 + NM_001388 DRG2 1 0.52 0.76 38 7.46 93.49 37 6.17 Yes 24 0.77 Yes 0 0 No -23 0.95 Yes 47 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 31409850 - NM_001100412 DROSHA 1 1.52 1.01 43 1.78 75.69 22 4.89 No 34 0.8 Yes 0 0 No -21 0.8 Yes 49 73.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 31428673 - NM_001100412 DROSHA 1 0.14 0.17 10 8.87 86.91 23 5.39 No 40 0.45 No 0 0 No -30 0.65 No 40 65.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 31435945 - NM_001100412 DROSHA 1 0.12 0.11 7 6.97 81.92 23 5.97 Yes 39 0.94 Yes 0 0 No -55 0.53 No 19 50.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 31437430 - NM_001100412 DROSHA 1 0.14 0.14 8 0.54 67.85 16 5.38 No 54 2.14 Yes 22 0.78 Yes -60 0.47 No 10 47.33 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 31459878 - NM_001100412 DROSHA 1 0.14 0.17 11 6.89 79.96 26 6.47 Yes 13 0.25 No 0 0 No -25 0.81 Yes 45 89.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 31467274 - NM_001100412 DROSHA 1 0.17 0.19 11 1.5 66.34 39 6.63 Yes 26 1.02 Yes 38 0.66 Yes -38 0.9 Yes 32 89.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 31467720 - NM_001100412 DROSHA 1 0.15 0.15 10 8.8 92.4 27 5.29 No 11 0.69 No 32 0.85 Yes -27 0.32 No 38 32.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 31472288 - NM_001100412 DROSHA 1 0.33 0.26 15 6.67 77.51 30 5.35 No NA NA NA 0 0 No -25 0.72 Yes 45 77.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 31489189 - NM_001100412 DROSHA 1 0.77 0.83 36 10.26 78.81 50 4.8 No 10 1.07 Yes 0 0 No -22 0.89 Yes 48 89.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 31496531 - NM_001100412 DROSHA 1 0.3 0.25 15 1.55 83.95 29 6.56 Yes 16 0 No 0 0 No -28 0.97 Yes 42 97.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 31506095 - NM_001100412 DROSHA 1 0.45 0.51 24 4.99 83.68 23 4.86 No 10 0.66 No 0 0 No -22 0.67 Yes 48 59.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 31508796 - NM_001100412 DROSHA 1 0.18 0.15 8 4.74 79.68 22 5.08 No 9 0.83 Yes 0 0 No -29 0.55 No 49 76.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 31515672 - NM_001100412 DROSHA 1 121 42.4 72 9.48 91.91 30 8.67 Yes 50 -1.77 No 30 0.23 Yes -28 0.28 No 44 59.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 31515672 - NM_001100412 DROSHA 1 18.73 6.28 71 9.48 91.91 30 8.67 Yes 50 -1.77 No 30 0.23 Yes -28 0.28 No 44 59.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 31521321 - NM_001100412 DROSHA 1 0.61 0.49 24 -12.76 72.25 33 5.74 Yes 1 0.78 Yes 0 0 No -27 0.65 No 43 73.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 31527014 - NM_001100412 DROSHA 1 0.21 0.14 8 -0.73 0 10 3.86 No 62 0.1 No 35 0.57 Yes -41 0.55 No 29 44.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 31531629 - NM_001100412 DROSHA 1 4.24 1.75 59 0.22 0 61 7.82 Yes 40 0.1 No 0 0 No -31 0.82 Yes 39 77.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 120855090 - NM_024094 DSCC1 1 0.36 0.21 11 3.14 72.4 23 4.84 No 61 0.45 No 24 0.85 Yes -25 0.72 Yes 45 82.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 38598487 - NM_006052 DSCR3 1 0.26 0.26 15 4.79 81.7 21 6.45 Yes 8 0.55 No 0 0 No -20 0.91 Yes 50 96.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 38600335 - NM_006052 DSCR3 1 0.18 0.13 9 1.43 80.22 23 4.84 No 66 -4.14 No 0 0 No -22 0.7 Yes 48 84.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 38601524 - NM_006052 DSCR3 1 0.1 0.13 8 3.65 70.93 37 6.16 Yes 24 1.07 Yes 27 0.27 Yes -36 0.78 Yes 34 89.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 38603120 - NM_006052 DSCR3 1 0.12 0.11 8 8.85 87.25 32 6.19 Yes 19 1.16 Yes 31 0.95 Yes -24 0.62 No 39 82.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 38603892 - NM_006052 DSCR3 1 1.88 2.13 63 1.87 63.36 55 6.79 Yes 42 1.58 Yes 35 0.83 Yes -35 0.49 No 16 64.92 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 38604277 - NM_006052 DSCR3 1 0.24 0.25 14 5.22 0 22 4.58 No 68 0.63 No 21 0.73 Yes -21 0.93 Yes 49 93.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 38612937 - NM_006052 DSCR3 1 0.5 0.43 25 -0.43 0 36 7.03 Yes 23 0.68 No 0 0 No -35 0.77 Yes 35 90.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 38634239 - NM_006052 DSCR3 1 16.53 15.57 72 10.58 89.87 24 4.28 No 30 0.62 No 24 0.77 Yes -24 0.75 Yes 46 89.55 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 116735595 + NM_013352 DSE 1 0.22 0.32 18 11.55 92.17 15 5.63 Yes 2 1.06 Yes 0 0 No -26 0.62 No 44 79.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 116752079 + NM_013352 DSE 1 0.07 0.18 12 8.01 87.04 48 5.54 No 35 0.3 No 28 0.82 Yes -33 0.67 Yes 37 62.13 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 116753543 + NM_013352 DSE 1 0.15 0.21 13 3.74 81.55 36 6.68 Yes 4 0.45 No 0 0 No -35 0.47 No 35 62.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 116757323 + NM_013352 DSE 1 0.29 0.4 24 8.8 81.54 30 4.62 No 44 1.25 Yes 0 0 No -29 0.7 Yes 41 67.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 29089260 + NM_001943 DSG2 1 1.79 0.51 27 6.93 88.03 28 7 Yes 15 1 Yes 0 0 No -27 0.93 Yes 43 95.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29102349 + NM_001943 DSG2 1 0.82 0.54 25 7.4 87.15 25 6.06 Yes 51 1.52 Yes 0 0 No -24 0.79 Yes 46 84.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29105814 + NM_001943 DSG2 1 0.38 0.25 11 6.19 80.35 22 5.26 No 65 0.8 Yes 0 0 No -21 0.8 Yes 49 82.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29115325 + NM_001943 DSG2 1 0.14 0.1 7 6.34 72 68 8.09 Yes 69 -4.61 No 0 0 No -31 0.71 Yes 39 64.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 35390916 - NM_001145318 DSN1 1 4.54 2.49 63 3.53 73.68 22 4.75 No 50 -2.36 No 0 0 No -21 0.74 Yes 49 74.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 35390934 - NM_001145318 DSN1 1 0.44 0.26 15 5.09 81.87 21 5.2 No 61 0.29 No 0 0 No -23 0.37 No 50 64.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 56329555 - NM_183380 DST 1 0.27 0.39 19 9 80.89 46 5.42 No 33 1.68 Yes 27 0.86 Yes -27 0.55 No 43 65.98 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 56348919 - NM_183380 DST 1 0.08 0.11 8 7.21 82.88 75 7.28 Yes 50 1.06 Yes 0 0 No -25 0.96 Yes 45 95.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 56358975 - NM_183380 DST 1 0.13 0.13 9 -7.02 0 27 5.26 No 39 0.16 No 0 0 No -27 0.72 Yes 44 70.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 56385760 - NM_183380 DST 1 0.1 0.13 8 5.73 84.91 37 4.45 No 18 0.17 No 0 0 No -30 0.6 No 39 60.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 56406010 - NM_183380 DST 1 0.2 0.25 15 5.12 80.24 26 5.38 No 75 -5.56 No 0 0 No -25 0.79 Yes 45 85.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 56415139 - NM_183380 DST 1 0.07 0.11 8 11.43 93.74 27 5.63 Yes 37 0.42 No 0 0 No -23 0.71 Yes 44 73.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 56418452 - NM_183380 DST 1 0.3 0.44 25 -1.12 83.01 29 6.98 Yes 3 0.69 No 0 0 No -25 0.34 No 45 40.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 56426990 - NM_183380 DST 1 0.22 0.35 19 -8.27 0 13 4.24 No 66 0.63 No 0 0 No -33 0.54 No 37 75.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 56438689 - NM_183380 DST 1 0.47 0.79 36 -7.34 72.98 22 6.54 Yes 0 1.32 Yes 24 0.58 Yes -21 0.84 Yes 49 85.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 56468512 - NM_183380 DST 1 0.26 0.38 19 7.73 76.91 23 5.14 No 56 0.44 No 22 0.58 Yes -27 0.41 No 43 51.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 56474143 - NM_183380 DST 1 0.45 0.63 31 10.21 90.8 29 5.43 No 16 1.34 Yes 28 0.9 Yes -23 0.54 No 42 72.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 56474278 - NM_183380 DST 1 0.16 0.21 13 3.01 76.91 42 6.62 Yes -2 0.8 Yes 0 0 No -41 0.5 No 29 86.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 56474355 - NM_183380 DST 1 0.21 0.25 13 5.04 79 24 5.28 No 47 0.69 No 0 0 No -23 0.91 Yes 47 93.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 56474374 - NM_183380 DST 1 0.5 0.69 32 5.8 89.94 18 4.64 No 61 1.38 Yes 0 0 No -40 0.27 No 53 32.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 56479280 - NM_183380 DST 1 0.25 0.39 23 -4.79 56.87 42 6.6 Yes 29 0.34 No 0 0 No -41 0.38 No 29 69.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 56482217 - NM_183380 DST 1 0.24 0.32 21 8.88 84.76 32 5.88 Yes 12 0.82 Yes 24 0.89 Yes -24 0.76 Yes 46 62.55 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 56485514 - NM_183380 DST 1 0.34 0.47 24 8.46 78.67 25 6.16 Yes 12 0.49 No 24 0.85 Yes -24 0.94 Yes 46 93.96 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 56499748 - NM_183380 DST 1 0.11 0.17 9 -6.58 0 23 6.06 Yes 76 0.64 No 0 0 No -22 0.79 Yes 48 57.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 56502274 - NM_183380 DST 1 0.17 0.28 17 4.81 79.01 21 6.29 Yes 8 0.58 No 0 0 No -20 0.6 No 50 58.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 56504399 - NM_183380 DST 1 0.07 0.18 12 -1.64 0 15 4.25 No 66 0.71 No 0 0 No -33 0.76 Yes 37 74.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 56568545 - NM_183380 DST 1 0.21 0.42 22 3.78 71.48 143 12.19 Yes 59 1.84 Yes 0 0 No -25 0.37 No 45 59.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 56601380 - NM_183380 DST 1 0.1 0.11 7 7.03 91.17 20 5.1 No -4 0.25 No 0 0 No -19 0.5 No 51 42.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 17587659 + NM_001011546 DSTN 1 0.05 0.13 8 0.54 62.73 25 6 Yes 30 -3.08 No 27 0.59 Yes -24 0.57 No 46 60.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 18589809 + NM_001318043 DTD1 1 0.17 0.18 12 9.03 98.73 23 6.07 Yes 10 1.43 Yes 0 0 No -22 0.91 Yes 48 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 212211972 + NM_016448 DTL 1 0.19 0.47 19 10.99 83.46 98 9.88 Yes 75 0.67 No 0 0 No -24 0.61 No 46 61.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 212216166 + NM_016448 DTL 1 0.1 0.24 12 11.07 87.64 14 5.57 Yes 1 0.18 No 0 0 No -25 0.75 Yes 45 76.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 212216317 + NM_016448 DTL 1 0.08 0.15 7 2.09 68.03 31 5.71 Yes 36 0.83 Yes 22 0.6 Yes -23 0.62 No 47 42.66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 212240600 + NM_016448 DTL 1 0.51 0.5 24 12.05 97.96 35 6.32 Yes 41 1.56 Yes 0 0 No -23 0.46 No 47 39.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 212273599 + NM_016448 DTL 1 0.17 0.31 15 1.24 0 9 3.87 No 22 1.09 Yes 0 0 No -28 0.87 Yes 42 83.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 212273677 + NM_016448 DTL 1 0.06 0.1 7 9.39 78.71 22 4.28 No 64 0.6 No 0 0 No -31 0.51 No 40 71.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 25781277 - NM_001320936 DTNB 1 9.71 0.44 22 12.95 94.73 30 3.95 No 35 0.11 No 0 0 No -29 0.88 Yes 41 74.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 25799396 - NM_001320936 DTNB 1 8.56 0.46 20 4.85 78.28 29 5.91 Yes 16 0.26 No 0 0 No -28 0.89 Yes 42 90.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 25816117 - NM_001320936 DTNB 1 1.23 0.15 11 7.06 81.45 19 5.16 No 35 0.26 No 0 0 No -29 0.81 Yes 41 93.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 25818058 - NM_001320936 DTNB 1 0.96 0.1 7 9.08 79.96 22 5.81 Yes 9 1.18 Yes 21 0.89 Yes -21 0.83 Yes 49 70.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 25818089 - NM_001320936 DTNB 1 0.94 0.1 7 2.52 74.79 26 5.92 Yes 36 0.61 No 21 0.89 Yes -33 0.47 No 45 47.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 25820031 - NM_001320936 DTNB 1 0.99 0.13 8 10.39 89.37 22 7.27 Yes 9 1.05 Yes 0 0 No -21 0.92 Yes 49 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 15530994 - NM_032122 DTNBP1 1 0.53 0.29 17 9.14 87.16 18 5.07 No 5 1.21 Yes 0 0 No -26 0.66 No 44 82.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 15552586 - NM_032122 DTNBP1 1 0.16 0.13 8 10.89 89.76 22 5.29 No 20 0.95 Yes 0 0 No -21 0.7 Yes 49 81.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 15586081 - NM_032122 DTNBP1 1 0.56 0.4 24 6.4 82.53 24 5.99 Yes 11 1.47 Yes 0 0 No -23 0.8 Yes 47 86.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 15610221 - NM_032122 DTNBP1 1 0.27 0.18 11 2.76 81.94 17 4.8 No 54 -3.05 No 0 0 No -25 0.4 No 47 52.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 15651640 - NM_032122 DTNBP1 1 1.68 0.74 36 10.4 93.23 35 8.46 Yes 65 0.68 No 34 0.65 Yes -23 0.36 No 47 47.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 15660753 - NM_032122 DTNBP1 1 4.41 2.32 61 9.73 94.88 33 5.98 Yes 30 0.03 No 32 0.62 Yes -32 0.95 Yes 38 93.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 49918940 + NM_020234 DTWD1 1 2.56 1.57 53 6.67 82.04 27 4.66 No 14 1.28 Yes 26 0.87 Yes -20 0.57 No 50 70.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 49921783 + NM_020234 DTWD1 1 0.25 0.14 8 2.83 67.95 47 6.73 Yes 34 1.22 Yes 24 0.89 Yes -46 0.55 No 21 85.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 49922905 + NM_020234 DTWD1 1 0.23 0.13 7 -4.38 0 16 4.58 No 36 -3.42 No 0 0 No -33 0.54 No 60 21.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 49923020 + NM_020234 DTWD1 1 2.61 1.33 51 7.76 84.79 23 4.54 No 56 -2.54 No 22 0.53 Yes -27 0.51 No 43 35.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 49923152 + NM_020234 DTWD1 1 0.15 0.11 7 2.86 77.28 19 5 No 75 -5.96 No 22 0.76 Yes -16 0.36 No 54 38.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 49923197 + NM_020234 DTWD1 1 6.5 3.65 68 7.69 73.6 30 5.76 Yes 7 0.82 Yes 29 0.77 Yes -29 0.77 Yes 41 86.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 49925716 + NM_020234 DTWD1 1 2.39 1.57 52 6.76 86.87 20 5.57 Yes 7 1.21 Yes 19 0.64 Yes -19 0.61 No 51 76.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 49929481 + NM_020234 DTWD1 1 2.16 1.01 43 5.21 78.31 34 6.54 Yes 21 1.63 Yes 0 0 No -33 0.65 No 37 88.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 118179282 - NM_001308081 DTWD2 1 0.58 0.22 16 6.5 76.76 29 5.92 Yes 58 -2.93 No 0 0 No -28 0.88 Yes 42 92.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 76130583 + NM_001102595 DTX2 1 0.56 0.21 9 9.23 87.94 19 6 Yes 6 0.82 Yes 18 0.53 Yes -29 0.42 No 52 73.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 76131521 + NM_001102595 DTX2 1 1.06 0.33 17 4.38 76.36 20 7.09 Yes 67 0.74 No 0 0 No -19 0.84 Yes 51 85.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 76132706 + NM_001102595 DTX2 1 0.47 0.24 15 6.49 79.85 21 5.38 No 28 -2.54 No 25 0.95 Yes -20 0.88 Yes 50 90.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 76632605 + NR_023383 DTX2P1-UPK3BP1-PMS2P11 1 7.18 1 39 7.97 89.86 26 5.66 Yes 13 0.3 No 0 0 No -25 0.95 Yes 45 95.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 76634114 + NR_023383 DTX2P1-UPK3BP1-PMS2P11 1 1.88 0.31 16 7.82 74.78 25 7.74 Yes 12 1.74 Yes 0 0 No -24 0.96 Yes 46 96.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 76634922 + NR_023383 DTX2P1-UPK3BP1-PMS2P11 1 2.87 0.43 23 9.83 77.98 21 6.24 Yes 8 1.69 Yes 0 0 No -20 0.79 Yes 50 92.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 76641201 + NR_023383 DTX2P1-UPK3BP1-PMS2P11 1 2.63 0.22 11 0.87 0 42 6.99 Yes 7 1.48 Yes 0 0 No -41 0.36 No 36 48.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 57999126 + NM_178502 DTX3 1 12.03 0.63 28 7.92 88.1 36 7.35 Yes 23 1.19 Yes 35 0.74 Yes -35 0.87 Yes 35 87.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57999245 + NM_178502 DTX3 1 2.12 0.13 9 1.9 75.02 38 6.08 Yes 25 0.39 No 0 0 No -22 0.61 No 40 74.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 57999366 + NM_178502 DTX3 1 4.6 0.22 11 -2.99 64.22 16 4.69 No 23 1.73 Yes 0 0 No -35 0.85 Yes 35 93.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57999771 + NM_178502 DTX3 1 3.32 0.81 35 9.68 76.32 23 7.86 Yes 10 1.85 Yes 22 0.91 Yes -22 0.74 Yes 48 84.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57999771 + NM_178502 DTX3 1 3.11 0.71 35 9.68 76.32 23 7.86 Yes 10 1.85 Yes 22 0.91 Yes -22 0.74 Yes 48 84.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58000666 + NM_178502 DTX3 1 23.01 7.67 72 8.14 87.5 13 5.29 No 30 1.34 Yes 21 0.68 Yes -21 0.43 No 49 47.67 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 58000829 + NM_178502 DTX3 1 0.29 0.11 7 5.87 88.13 18 5.74 Yes 5 1.79 Yes 0 0 No -17 0.54 No 53 77.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 58960040 + NM_001300727 DTX4 1 0.75 0.44 22 5.4 71.63 35 5.81 Yes 3 0.13 No 0 0 No -34 0.7 Yes 49 55.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 242616591 - NM_001320902 DTYMK 1 0.09 0.18 10 7.31 77.86 24 5.34 No 60 0.77 Yes 0 0 No -26 0.71 Yes 46 54.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 242625289 - NM_001320902 DTYMK 1 0.22 0.36 21 2.5 0 38 5.57 Yes 30 1.91 Yes 0 0 No -37 0.92 Yes 33 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80015968 - NM_022156 DUS1L 1 0.33 0.64 32 7.43 81.24 25 5.47 No 12 0.27 No 24 0.93 Yes -24 0.83 Yes 46 68.97 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 80016285 - NM_022156 DUS1L 1 11.17 26.08 72 -3.03 0 11 4.12 No NA NA NA 28 0.24 Yes -28 0.66 No 45 35.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 80016382 - NM_022156 DUS1L 1 0.15 0.35 19 -0.62 72.57 21 5.2 No 52 -4.22 No 0 0 No -24 0.88 Yes 46 83.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80016717 - NM_022156 DUS1L 1 0.08 0.17 8 6.26 79.42 33 5.73 Yes -3 0.89 Yes 27 0.97 Yes -30 0.71 Yes 40 58.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 80016907 - NM_022156 DUS1L 1 0.16 0.4 23 10.88 92.96 27 6.14 Yes 46 -0.3 No 0 0 No -26 0.78 Yes 44 81.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80018831 - NM_022156 DUS1L 1 1.15 2.83 66 3.42 0 10 4 No 13 0.78 Yes 18 0.92 Yes -25 0.88 Yes 45 84.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80019594 - NM_022156 DUS1L 1 0.11 0.22 14 -4.88 0 9 5.57 Yes 75 -2.56 No 25 0.47 Yes -24 0.47 No 46 37.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 80020849 - NM_022156 DUS1L 1 0.07 0.21 12 -9.16 0 26 5.39 No 13 0.6 No 0 0 No -25 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80021372 - NM_022156 DUS1L 1 0.13 0.29 18 7.86 88.61 21 5.66 Yes 48 0.09 No 20 0.67 Yes -20 0.56 No 50 68.69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 80022078 - NM_022156 DUS1L 1 0.07 0.21 14 1.34 0 21 4.58 No 40 2.1 Yes 20 0.89 Yes -20 0.54 No 50 66.07 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 80022173 - NM_022156 DUS1L 1 0.3 0.72 31 5.13 76.59 27 4.9 No 33 0.41 No 22 0.68 Yes -26 0.94 Yes 44 92.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 68082407 + NM_001271762 DUS2 1 0.23 0.13 8 6.59 93.21 15 5.51 No 2 0.76 No 0 0 No -24 0.9 Yes 46 96.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68085319 + NM_001271762 DUS2 1 0.2 0.15 8 8.22 93.41 55 8.29 Yes 42 1.8 Yes 0 0 No -44 0.71 Yes 16 63.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68104040 + NM_001271762 DUS2 1 0.2 0.11 7 -2.43 0 28 4.72 No 15 1.34 Yes 0 0 No -27 0.9 Yes 43 91.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68104040 + NM_001271762 DUS2 1 0.82 0.4 19 -2.43 0 28 4.72 No 15 1.34 Yes 0 0 No -27 0.9 Yes 43 91.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68104040 + NM_001271762 DUS2 1 1.11 0.63 31 -2.43 0 28 4.72 No 15 1.34 Yes 0 0 No -27 0.9 Yes 43 91.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68110865 + NM_001271762 DUS2 1 0.19 0.13 9 10.7 87.72 23 5.9 Yes 10 1.4 Yes 0 0 No -22 0.95 Yes 48 94.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5785842 - NM_020175 DUS3L 1 0.2 0.13 8 -4.01 0 17 5.29 No 29 -2.24 No 19 0.86 Yes -23 0.43 No 56 20.69 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 5786087 - NM_020175 DUS3L 1 0.22 0.15 8 4.17 70.16 15 6.16 Yes 69 1.04 Yes 0 0 No -23 0.71 Yes 47 80.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5786931 - NM_020175 DUS3L 1 9.68 4.83 70 9.77 86.16 83 13.37 Yes 70 2.65 Yes 40 0.71 Yes -43 0.44 No 19 53.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 107205210 + NR_073002 DUS4L 1 0.58 0.17 11 2.5 74.94 13 4.86 No 49 1.39 Yes 0 0 No -24 0.61 No 46 63.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 107211572 + NR_073002 DUS4L 1 1.43 0.71 29 2.55 62.85 37 8.57 Yes 24 0.73 No 23 0.65 Yes -36 0.73 Yes 23 43.61 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 107216853 + NR_073002 DUS4L 1 6.46 1.04 43 2.93 78.66 22 4.4 No 20 0.17 No 27 0.71 Yes -22 0.62 No 44 47.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 221876018 - NM_007207 DUSP10 1 0.1 0.14 9 1.35 81.99 71 7.24 Yes 17 0.98 Yes 0 0 No -29 0.94 Yes 41 94.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 221879615 - NM_007207 DUSP10 1 0.12 0.22 13 1.4 72.21 40 6.95 Yes 32 1.86 Yes 0 0 No -39 0.92 Yes 31 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 221879615 - NM_007207 DUSP10 1 0.09 0.17 11 1.4 72.21 40 6.95 Yes 32 1.86 Yes 0 0 No -39 0.92 Yes 31 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 221910473 - NM_007207 DUSP10 1 0.09 0.14 8 8.24 88.69 17 5.48 No 59 -1.68 No 0 0 No -23 0.89 Yes 47 79.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 221910609 - NM_007207 DUSP10 1 0.12 0.22 13 0.11 0 36 5.48 No 14 0.83 Yes 0 0 No -32 0.71 Yes 38 76.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 221910614 - NM_007207 DUSP10 1 0.21 0.38 20 10.83 89.09 31 5.2 No 9 0.86 Yes 0 0 No -27 0.76 Yes 43 76.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73989976 - NM_003584 DUSP11 1 0.13 0.26 15 -0.82 0 14 4.27 No 29 1.19 Yes 0 0 No -42 0.46 No 36 78.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 73993429 - NM_003584 DUSP11 1 0.77 1.53 55 1.34 0 38 6.4 Yes 25 1.29 Yes 0 0 No -37 0.89 Yes 33 95.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73993707 - NM_003584 DUSP11 1 0.24 0.4 24 -0.74 70.66 18 4.7 No 31 0.05 No 0 0 No -41 0.64 No 29 76.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 73993752 - NM_003584 DUSP11 1 0.12 0.19 11 -0.39 64.62 22 4.89 No 36 -3.2 No 28 0.76 Yes -26 0.43 No 44 59.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 73994021 - NM_003584 DUSP11 1 0.11 0.24 12 3.29 0 13 4.36 No 18 1.65 Yes 0 0 No -30 0.82 Yes 40 94.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73996080 - NM_003584 DUSP11 1 0.22 0.31 20 -2.04 83.92 28 8.16 Yes 15 0.69 No 27 0.92 Yes -27 0.84 Yes 43 86.26 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 74002170 - NM_003584 DUSP11 1 0.15 0.25 15 -11.83 67.23 39 5.4 No 44 0.43 No 0 0 No -38 0.68 Yes 32 68.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 161721444 + NM_007240 DUSP12 1 28.41 11.67 72 10.61 88.31 65 6.1 Yes 65 1.21 Yes 30 0.85 Yes -30 0.82 Yes 40 90.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 161721465 + NM_007240 DUSP12 1 1.25 0.51 27 2.76 0 11 4.12 No 39 0.76 No 0 0 No -25 0.47 No 19 71.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 161722968 + NM_007240 DUSP12 1 0.2 0.22 14 6.71 84.37 26 6.16 Yes 13 1.21 Yes 0 0 No -25 0.83 Yes 45 89.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161725827 + NM_007240 DUSP12 1 0.19 0.15 10 5.46 85.02 17 6.93 Yes 4 1.07 Yes 0 0 No -16 0.3 No 49 46.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 161725830 + NM_007240 DUSP12 1 0.42 0.35 17 3.8 80.12 20 7.14 Yes 7 1.04 Yes 0 0 No -19 0.49 No 46 50.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 12645495 - NM_030640 DUSP16 1 0.36 0.5 26 7.95 94.05 20 5.73 Yes 7 0.6 No 0 0 No -20 0.53 No 51 70.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 12657621 - NM_030640 DUSP16 1 1.8 2.1 46 10.47 94.37 43 8.6 Yes 30 1.96 Yes 0 0 No -42 0.94 Yes 28 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 12695280 - NM_030640 DUSP16 1 0.58 0.29 17 5.5 90.92 23 5.09 No 15 -0.35 No 0 0 No -27 0.56 No 43 10.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 12707594 - NM_030640 DUSP16 1 12.92 5.65 72 5.58 81.77 61 5.52 No 69 0.97 Yes 26 0.5 Yes -25 0.63 No 45 51.73 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 12708060 - NM_030640 DUSP16 1 0.29 0.13 8 7.35 82.76 25 5.39 No 74 1.59 Yes 0 0 No -24 0.59 No 46 84.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 31061049 - NM_001304796 DUSP18 1 1.03 0.14 8 3.48 79.69 22 5.82 Yes 40 -4.46 No 0 0 No -21 0.9 Yes 49 88.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 31061109 - NM_001304796 DUSP18 1 18.93 2.04 54 6.93 86.73 22 5.2 No 42 0.54 No 24 0.61 Yes -24 0.71 Yes 48 67.72 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 31062926 - NM_001304796 DUSP18 1 4.05 0.42 23 10.08 86.46 38 4.79 No 62 0.52 No 28 0.31 Yes -31 0.61 No 39 59.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 183951885 + NM_080876 DUSP19 1 6.95 0.31 21 11.28 91.53 28 7.41 Yes 15 0.92 Yes 27 0.76 Yes -27 0.41 No 49 69.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 303729 + NM_001286555 DUSP22 1 0.11 0.14 9 8.68 84.15 34 6.08 Yes 21 0.22 No 0 0 No -33 0.74 Yes 37 79.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 305608 + NM_001286555 DUSP22 1 0.1 0.17 12 5.7 86.41 18 5.53 No 5 1.58 Yes 0 0 No -31 0.76 Yes 39 73.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 323867 + NM_001286555 DUSP22 1 2.93 3.46 65 5.92 87.11 35 6.35 Yes 7 -1.23 No 0 0 No -28 0.43 No 46 50.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 324694 + NM_001286555 DUSP22 1 0.15 0.17 10 8.39 81 26 5.66 Yes 68 0.95 Yes 0 0 No -25 0.83 Yes 45 86.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 338820 + NM_001286555 DUSP22 1 0.15 0.15 10 4.17 76.66 47 8.17 Yes 34 0.92 Yes 0 0 No -46 0.59 No 24 87.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 345254 + NM_001286555 DUSP22 1 0.14 0.14 7 6.54 87.85 47 7.68 Yes 34 1.07 Yes 0 0 No -46 0.39 No 24 51.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 346161 + NM_001286555 DUSP22 1 0.11 0.17 10 8.72 80.4 41 7.48 Yes 28 2.68 Yes 0 0 No -40 0.91 Yes 30 96.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 241503143 + NM_001033575 DUSP28 1 4.35 0.39 23 5.73 68.69 26 6.85 Yes 68 1.68 Yes 0 0 No -25 0.96 Yes 45 96.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41851478 - NM_004090 DUSP3 1 1.24 0.35 18 12.22 88.27 55 8.1 Yes 65 0.59 No 28 0.24 Yes -57 0.66 Yes 16 63.57 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 29203592 - NM_001394 DUSP4 1 0.26 0.75 30 10.98 84.46 28 7.28 Yes 15 1.74 Yes 27 0.86 Yes -27 0.81 Yes 43 85.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52088167 - NM_001947 DUSP7 1 0.36 0.13 8 7.13 86.56 20 4.79 No 34 -1.68 No 0 0 No -19 0.81 Yes 51 78.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 48632341 + NM_001948 DUT 1 0.1 0.71 32 8.66 94.58 43 6.39 Yes 30 0.87 Yes 25 0.62 Yes -25 0.52 No 39 56.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 48633655 + NM_001948 DUT 1 0.08 0.71 38 0.23 65.59 26 5.83 Yes 13 1.55 Yes 25 0.83 Yes -25 0.58 No 39 63.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 48633659 + NM_001948 DUT 1 0.01 0.1 7 -2.89 0 30 6.03 Yes 17 1.54 Yes 25 0.83 Yes -29 0.67 Yes 35 57.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 48633720 + NM_001948 DUT 1 0.03 0.33 19 -2.73 0 13 4.24 No 28 0.95 Yes 0 0 No -40 0.43 No 35 58.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 48634195 + NM_001948 DUT 1 0.02 0.17 9 -0.4 50.07 29 5.57 Yes 37 -3.82 No 20 0.9 Yes -28 0.74 Yes 42 46.72 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 1273539 - NM_001330311 DVL1 1 0.58 0.28 14 2.95 71.5 12 5.81 Yes 32 1.95 Yes 0 0 No -44 0.63 No 26 40.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1273680 - NM_001330311 DVL1 1 0.53 0.18 9 3.43 82.3 25 4.66 No 12 0.05 No 0 0 No -24 0.83 Yes 46 55.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 1275533 - NM_001330311 DVL1 1 0.71 0.22 14 1.01 77.55 17 5.48 No 29 0.98 Yes 0 0 No -27 0.61 No 43 54.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1275554 - NM_001330311 DVL1 1 1.26 0.49 25 -4.31 0 21 6.78 Yes 8 0.96 Yes 0 0 No -20 0.89 Yes 50 86.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7130278 - NM_004422 DVL2 1 1.23 0.89 41 6.49 73.19 23 5.1 No NA NA NA 0 0 No -22 0.73 Yes 48 72.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7131022 - NM_004422 DVL2 1 0.22 0.19 12 2.16 0 12 4.24 No 13 1.82 Yes 0 0 No -25 0.66 No 45 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7131031 - NM_004422 DVL2 1 2.93 2.69 59 2.76 76.96 52 6.72 Yes 4 1.8 Yes 30 0.34 Yes -16 0.57 No 54 71.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 7131100 - NM_004422 DVL2 1 0.14 0.13 9 -5.97 0 28 5.2 No 25 0.08 No 0 0 No -27 0.85 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7132795 - NM_004422 DVL2 1 0.57 0.36 22 2.88 73.81 18 5.57 Yes 5 0.21 No 24 0.57 Yes -17 0.72 Yes 53 57.37 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 7133457 - NM_004422 DVL2 1 1.01 0.72 35 1.98 72.53 14 4.97 No 38 0.82 Yes 20 0.3 Yes -20 0.39 No 50 47.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 183874147 + NM_004423 DVL3 1 0.13 0.13 9 4.22 73.58 13 5.1 No 0 1.43 Yes 19 0.25 Yes -19 0.77 Yes 51 87.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183882265 + NM_004423 DVL3 1 1.78 1.75 58 4.82 69.48 24 5.48 No 74 -2.79 No 23 0.69 Yes -23 0.63 No 47 64.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 183882300 + NM_004423 DVL3 1 1.39 1.38 53 1.26 62.19 17 5.48 No 4 0.26 No 0 0 No -41 0.63 No 29 39.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 183882870 + NM_004423 DVL3 1 0.32 0.24 10 -8.21 0 14 4.46 No 53 0.15 No 20 0.43 Yes -34 0.67 Yes 36 64.49 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 183883191 + NM_004423 DVL3 1 0.15 0.15 9 4.6 80.76 30 6.31 Yes 17 0.48 No 20 0.91 Yes -29 0.52 No 37 53.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 183884198 + NM_004423 DVL3 1 0.1 0.13 8 8.89 84.24 24 5.45 No 24 1.69 Yes 24 0.76 Yes -23 0.73 Yes 47 76.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183884664 + NM_004423 DVL3 1 0.62 0.82 36 5.06 79.61 31 7.42 Yes 59 1.44 Yes 30 0.87 Yes -30 0.95 Yes 40 87.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183885398 + NM_004423 DVL3 1 0.07 0.11 7 7.81 83.72 23 5.8 Yes 42 1.68 Yes 0 0 No -25 0.56 No 45 63.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 183885673 + NM_004423 DVL3 1 0.16 0.15 8 4.88 72.34 27 5.71 Yes 46 -1.54 No 21 0.63 Yes -24 0.54 No 46 42.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 183887723 + NM_004423 DVL3 1 0.29 0.35 19 8.76 88.3 22 4.58 No 25 -0.31 No 0 0 No -20 0.68 Yes 52 63.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 46623869 - NM_017653 DYM 1 0.2 0.14 8 6.39 79.07 15 4.57 No 2 0.9 Yes 23 0.49 Yes -21 0.48 No 49 64.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 46640986 - NM_017653 DYM 1 1.97 1.4 54 8.17 98.16 29 5.48 No 3 0.65 No 28 0.81 Yes -28 0.67 Yes 42 46.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr18 46769016 - NM_017653 DYM 1 0.11 0.11 7 8.59 87.47 28 5.44 No 15 1 Yes 0 0 No -33 0.58 No 37 65.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 46797864 - NM_017653 DYM 1 0.16 0.15 9 9 89.26 34 6.44 Yes 73 1.37 Yes 0 0 No -25 0.93 Yes 45 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 46808542 - NM_017653 DYM 1 0.14 0.14 8 1.07 0 28 6.68 Yes 15 1.46 Yes 0 0 No -27 0.67 Yes 43 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 46808978 - NM_017653 DYM 1 0.1 0.1 7 10.38 87.07 26 5.55 No 38 0.83 Yes 0 0 No -30 0.31 No 44 34.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 46812984 - NM_017653 DYM 1 7.72 7.88 72 7.3 89.13 25 5.39 No 12 1.45 Yes 21 0.94 Yes -24 0.86 Yes 46 95.63 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 46847748 - NM_017653 DYM 1 0.23 0.26 15 9.11 90.78 35 5.59 Yes 22 1.12 Yes 29 0.56 Yes -29 0.45 No 41 62.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 46856021 - NM_017653 DYM 1 0.57 0.58 32 6.96 84.35 21 5.57 Yes 66 0.77 Yes 0 0 No -24 0.47 No 46 53.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 46856078 - NM_017653 DYM 1 0.58 0.6 28 6.49 81.93 22 7.28 Yes 9 0.79 Yes 21 0.87 Yes -21 0.75 Yes 49 94.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 46860222 - NM_017653 DYM 1 0.22 0.22 13 -1.42 77.63 32 6.47 Yes 19 1.52 Yes 0 0 No -31 0.86 Yes 39 90.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 46902095 - NM_017653 DYM 1 0.24 0.22 13 3.91 75.33 38 7.27 Yes 25 1.64 Yes 25 0.72 Yes -37 0.35 No 33 69.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr18 46906071 - NM_017653 DYM 1 0.16 0.17 9 6.89 83.47 21 4.79 No 8 0.89 Yes 0 0 No -20 0.86 Yes 50 87.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 46909202 - NM_017653 DYM 1 0.57 0.53 26 7.48 83.37 34 7.19 Yes 66 0.5 No 0 0 No -27 0.51 No 43 50.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 46917183 - NM_017653 DYM 1 2.75 2.82 56 6.33 82.52 34 5.13 No -4 -2.03 No 26 0.74 Yes -30 0.38 No 37 37.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 46917822 - NM_017653 DYM 1 2.66 2.74 64 6.81 78.32 30 6.19 Yes 40 0.72 No 29 0.78 Yes -30 0.38 No 41 60.97 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 46918013 - NM_017653 DYM 1 4.43 4 71 5.1 76.26 31 6.49 Yes 15 1.13 Yes 0 0 No -30 0.82 Yes 40 58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 46920113 - NM_017653 DYM 1 1.66 1.47 51 7.82 83.55 23 5.09 No 66 1.06 Yes 27 0.6 Yes -54 0.36 No 16 61.45 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 46944428 - NM_017653 DYM 1 1.61 1.43 51 11.46 95.65 26 4.89 No 13 1.09 Yes 28 0.85 Yes -28 0.9 Yes 42 94.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 46956798 - NM_017653 DYM 1 0.21 0.13 8 3.77 83.18 25 5.39 No 50 0 No 0 0 No -45 0.44 No 25 62.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 102449740 + NM_001376 DYNC1H1 1 0.11 0.17 9 -1.38 0 20 4.58 No 37 0.59 No 0 0 No -19 0.38 No 27 46.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 102454582 + NM_001376 DYNC1H1 1 0.1 0.17 11 7.19 79.93 54 9.3 Yes 41 1.47 Yes 0 0 No -23 0.86 Yes 47 89.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102463144 + NM_001376 DYNC1H1 1 0.1 0.18 12 4.57 83.4 21 7.21 Yes 8 1.27 Yes 0 0 No -20 0.73 Yes 50 83.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102480344 + NM_001376 DYNC1H1 1 0.17 0.22 14 1.83 79.1 21 5.18 No 58 0.32 No 0 0 No -20 0.86 Yes 50 87.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 102480423 + NM_001376 DYNC1H1 1 0.1 0.15 11 6.36 85.15 18 4.74 No 31 0.47 No 0 0 No -25 0.3 No 53 49.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 102484848 + NM_001376 DYNC1H1 1 0.48 0.81 35 9.97 80.89 27 8.37 Yes 14 0.26 No 0 0 No -26 0.62 No 44 52.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 102486288 + NM_001376 DYNC1H1 1 0.13 0.17 8 3.27 59.54 32 7.25 Yes 19 0.69 No 0 0 No -31 0.9 Yes 39 90.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 102490621 + NM_001376 DYNC1H1 1 0.14 0.22 13 8.87 84.27 24 5.48 No 11 0.5 No 0 0 No -23 0.75 Yes 47 80.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 102490812 + NM_001376 DYNC1H1 1 0.75 1.29 43 9.96 80.63 29 6.4 Yes 16 0.84 Yes 0 0 No -28 0.76 Yes 42 84.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102500671 + NM_001376 DYNC1H1 1 0.07 0.14 8 2.87 0 13 4.36 No 15 1.29 Yes 0 0 No -27 0.86 Yes 43 88.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102502856 + NM_001376 DYNC1H1 1 0.1 0.13 7 7.42 79.88 22 6.27 Yes 9 1.66 Yes 0 0 No -21 0.65 No 37 48.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 102503829 + NM_001376 DYNC1H1 1 0.35 0.44 25 7.85 95.19 27 3.65 No 57 -3.33 No 24 0.58 Yes -17 0.56 No 49 42.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 172572991 + NM_001271785 DYNC1I2 1 0.17 0.43 23 7.78 84.05 47 7.21 Yes 34 0.78 Yes 0 0 No -27 0.75 Yes 43 66.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 172585212 + NM_001271785 DYNC1I2 1 0.08 0.14 9 5.32 86.9 19 5.48 No -2 1.01 Yes 24 0.77 Yes -24 0.7 Yes 46 72.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 172586223 + NM_001271785 DYNC1I2 1 0.04 0.11 7 -3.59 0 30 6.77 Yes 17 1.81 Yes 0 0 No -29 0.91 Yes 41 84.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172586570 + NM_001271785 DYNC1I2 1 0.1 0.24 13 1.15 73.7 24 5.2 No -1 0.94 Yes 0 0 No -23 0.88 Yes 47 92.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172604288 + NM_001271785 DYNC1I2 1 7.22 18.39 72 6.43 85.58 64 5.66 Yes 36 0.74 No 33 0.49 Yes -27 0.32 No 34 47.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 32572012 - NM_016141 DYNC1LI1 1 0.14 0.21 8 -11.41 0 41 4.77 No 42 0.71 No 0 0 No -23 0.47 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 32586447 - NM_016141 DYNC1LI1 1 0.34 0.4 20 8.07 86.58 32 5.92 Yes 73 -3.98 No 0 0 No -21 0.39 No 49 52.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 66764119 - NR_136658 DYNC1LI2 1 0.16 0.14 10 2.97 0 11 4.12 No 19 0.52 No 0 0 No -31 0.85 Yes 39 90.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 66765128 - NR_136658 DYNC1LI2 1 0.19 0.17 11 6.1 77.48 32 5.02 No 75 -2.55 No 0 0 No -31 0.5 No 39 62.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 66766351 - NR_136658 DYNC1LI2 1 0.25 0.17 12 1.96 72.97 30 4.93 No 44 0.47 No 23 0.73 Yes -27 0.6 No 43 74.5 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 66768409 - NR_136658 DYNC1LI2 1 0.27 0.21 13 9.13 89.7 30 5.7 Yes 56 1.11 Yes 0 0 No -29 0.68 Yes 41 88.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 66776458 - NR_136658 DYNC1LI2 1 0.37 0.38 23 9.64 92.68 14 5.56 Yes 24 0.55 No 26 0.42 Yes -24 0.47 No 46 56.98 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 44001541 + NM_001193464 DYNC2LI1 1 0.94 0.18 10 -1.86 59.09 34 5.83 Yes 38 -1.34 No 0 0 No -30 0.59 No 40 63.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 44001551 + NM_001193464 DYNC2LI1 1 1.26 0.25 14 2.09 0 15 3.16 No 2 0.15 No 0 0 No -18 0.82 Yes 52 49.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 44019814 + NM_001193464 DYNC2LI1 1 1.71 0.75 38 9.9 88.53 24 8.7 Yes 11 1.89 Yes 23 0.6 Yes -30 0.34 No 47 40.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 44023028 + NM_001193464 DYNC2LI1 1 139.39 34.93 72 2.2 86.98 23 5.23 No 55 -3.31 No 19 0.88 Yes -22 0.87 Yes 48 86.87 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 44033042 + NM_001193464 DYNC2LI1 1 0.73 0.32 18 7.57 84.59 40 6.78 Yes 35 0.92 Yes 0 0 No -39 0.94 Yes 31 97.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120934218 + NM_001037495 DYNLL1 1 840.83 795.04 72 4.89 77.04 22 4.8 No 9 0.94 Yes 20 0.52 Yes -21 0.93 Yes 49 87.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 120934239 + NM_001037495 DYNLL1 1 0.43 0.43 25 0.79 66.54 19 5.45 No 30 0.91 Yes 0 0 No -18 0.45 No 28 25.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 120935637 + NM_001037495 DYNLL1 1 0.03 0.46 24 6.82 79.48 21 6.46 Yes 65 1.01 Yes 0 0 No -20 0.51 No 50 62.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 120935852 + NM_001037495 DYNLL1 1 0.03 0.49 21 1.86 60.06 24 6.43 Yes 65 2.37 Yes 25 0.65 Yes -23 0.91 Yes 47 87.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 56166460 + NM_080677 DYNLL2 1 0.15 0.4 23 8.29 88.55 17 6.08 Yes 4 1.31 Yes 34 0.79 Yes -24 0.47 No 48 79.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr20 33114076 + NM_177953 DYNLRB1 1 42.03 7.9 72 -0.02 0 28 7.87 Yes 15 2.22 Yes 0 0 No -27 0.86 Yes 43 91.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33114076 + NM_177953 DYNLRB1 1 17 3.22 64 -0.02 0 28 7.87 Yes 15 2.22 Yes 0 0 No -27 0.86 Yes 43 91.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33117655 + NM_177953 DYNLRB1 1 0.62 2.57 62 9.91 95.03 30 6.01 Yes 13 0.19 No 29 0.81 Yes -29 0.83 Yes 41 79.56 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 33121327 + NM_177953 DYNLRB1 1 0.23 1.01 40 9.21 80.5 24 5.92 Yes 11 1.91 Yes 0 0 No -23 0.84 Yes 47 93.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33122409 + NM_177953 DYNLRB1 1 0.17 0.71 34 3.07 78.32 13 5.29 No 67 1.24 Yes 24 0.85 Yes -22 0.38 No 46 28.52 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 33128237 + NM_177953 DYNLRB1 1 0.03 0.13 8 7.27 85.79 25 5.17 No 12 0.15 No 0 0 No -25 0.89 Yes 45 74.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 159057740 - NM_006519 DYNLT1 1 0.08 0.17 9 2.91 76.18 47 6.85 Yes 34 1.16 Yes 0 0 No -34 0.92 Yes 36 93.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 159058218 - NM_006519 DYNLT1 1 0.3 0.63 29 5.39 77.05 19 3.83 No 31 1.13 Yes 0 0 No -27 0.79 Yes 43 68.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 159061223 - NM_006519 DYNLT1 1 0.14 0.53 28 10.89 91.78 21 5.57 Yes 8 1.23 Yes 0 0 No -20 0.82 Yes 50 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 38794075 + NM_001396 DYRK1A 1 45.95 28.71 72 6.37 88.29 15 4.94 No 2 0.19 No 0 0 No -21 0.6 No 49 83.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 38797991 + NM_001396 DYRK1A 1 0.52 0.32 16 9.64 82.25 23 5.95 Yes 10 0.22 No 0 0 No -22 0.62 No 48 48.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 38801168 + NM_001396 DYRK1A 1 0.45 0.28 17 6.19 84.82 40 5.76 Yes 71 -1.81 No 0 0 No -33 0.6 No 37 74.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 38802570 + NM_001396 DYRK1A 1 1.29 0.83 35 7.86 84.89 46 5.31 No 33 1.12 Yes 25 0.71 Yes -26 0.55 No 44 74.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 38828431 + NM_001396 DYRK1A 1 1.66 1.08 45 7 89.13 33 5.56 Yes 44 1.58 Yes 0 0 No -28 0.84 Yes 42 93.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 38850463 + NM_001396 DYRK1A 1 5.27 1.42 52 -7.04 0 11 3.04 No 66 0.96 Yes 28 0.41 Yes -16 0.47 No 54 38.95 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 38850509 + NM_001396 DYRK1A 1 583.75 149.14 72 6.54 86.38 18 4.46 No 43 0.06 No 24 0.71 Yes -24 0.59 No 46 73.78 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr21 38850511 + NM_001396 DYRK1A 1 0.41 0.13 8 -7.92 70.51 20 4.58 No 45 0.06 No 0 0 No -26 0.64 No 44 67.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 38851357 + NM_001396 DYRK1A 1 0.05 0.1 7 10.56 81.62 22 5.92 Yes 60 0.23 No 0 0 No -21 0.61 No 49 72.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 38860500 + NM_001396 DYRK1A 1 0.06 0.11 7 1.6 65.98 26 4.36 No 48 0.54 No 0 0 No -25 0.71 Yes 45 77.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 38860545 + NM_001396 DYRK1A 1 0.23 0.46 24 7.8 86.85 15 4.03 No 2 0.08 No 0 0 No -22 0.43 No 48 63.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 38865320 + NM_001396 DYRK1A 1 0.1 0.14 10 -14.27 0 27 5.76 Yes 14 0.65 No 0 0 No -26 0.76 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 38881241 + NM_001396 DYRK1A 1 0.14 0.14 10 13.62 94.16 51 7.01 Yes 38 1.26 Yes 0 0 No -38 0.37 No 32 68.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 68044513 + NM_006482 DYRK2 1 1.01 0.35 21 4.1 83.4 21 5.1 No 8 0.82 Yes 0 0 No -20 0.54 No 50 51.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 206812269 + NM_001004023 DYRK3 1 1.62 0.35 21 7.58 92.03 15 3.89 No 2 1.06 Yes 0 0 No -26 0.41 No 10 37.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 55653523 - NR_037923 DYX1C1-CCPG1 1 0.36 0.22 13 7.64 84.2 27 6.16 Yes 14 1.7 Yes 0 0 No -26 0.84 Yes 44 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 55672296 - NR_037923 DYX1C1-CCPG1 1 0.21 0.14 8 8.18 85.05 37 10.59 Yes 24 1.1 Yes 0 0 No -37 0.48 No 33 55.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 108330075 + NM_014648 DZIP3 1 0.36 0.19 13 3.39 68.05 28 5.58 Yes 0 1.61 Yes 0 0 No -27 0.69 Yes 43 55.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 108335462 + NM_014648 DZIP3 1 0.84 0.47 24 6.15 81.75 25 6.89 Yes 12 1.13 Yes 0 0 No -24 0.8 Yes 46 77.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 108338283 + NM_014648 DZIP3 1 0.33 0.14 9 4.45 77.73 31 4.84 No 22 0.24 No 0 0 No -30 0.62 No 40 47.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 108363577 + NM_014648 DZIP3 1 0.45 0.18 13 7.24 79.07 25 4.96 No 12 0.16 No 0 0 No -21 0.59 No 49 73.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 108373228 + NM_014648 DZIP3 1 0.33 0.17 12 7.08 75.48 63 7.02 Yes 24 0.46 No 0 0 No -36 0.93 Yes 34 93.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 108392939 + NM_014648 DZIP3 1 0.71 0.19 13 5.84 90.33 19 4.38 No 35 0.7 No 0 0 No -47 0.85 Yes 23 61.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 108396329 + NM_014648 DZIP3 1 2.22 0.83 40 -0.91 0 13 4.24 No 0 0.92 Yes 26 0.64 Yes -58 0.46 No 40 82.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 108405274 + NM_014648 DZIP3 1 1.97 0.51 28 3.18 68.07 48 5.93 Yes 52 0.05 No 21 0.6 Yes -25 0.4 No 45 48.86 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 108407483 + NM_014648 DZIP3 1 1.99 0.78 37 4.24 75.03 17 5.97 Yes 4 0.93 Yes 0 0 No -24 0.5 No 40 64.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 108407499 + NM_014648 DZIP3 1 6.16 2.35 61 5.05 83.86 23 4.66 No 20 0.94 Yes 0 0 No -22 0.94 Yes 48 95.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 32265074 - NM_005225 E2F1 1 0.26 0.26 13 -8.35 65.18 28 5.73 Yes 75 0.33 No 0 0 No -27 0.64 No 43 59.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 32265128 - NM_005225 E2F1 1 0.09 0.1 7 2.55 0 16 3.96 No 26 0.86 Yes 0 0 No -33 0.73 Yes 37 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 32265164 - NM_005225 E2F1 1 0.13 0.11 8 1.7 69.65 14 6.67 Yes 1 0.02 No 24 0.89 Yes -13 0.38 No 57 60.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 32265337 - NM_005225 E2F1 1 0.32 0.25 12 -1.42 0 22 4.64 No 73 0.55 No 0 0 No -21 0.64 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 32265348 - NM_005225 E2F1 1 1.65 1.11 44 -5.06 0 23 5.14 No -2 0.6 No 23 0.87 Yes -22 0.83 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 23847558 - NM_004091 E2F2 1 0.55 0.17 9 -4.38 0 9 3.87 No 50 1.48 Yes 0 0 No -32 0.91 Yes 38 90.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 23847562 - NM_004091 E2F2 1 2.96 0.44 26 -2.68 79.86 29 6.4 Yes 46 1.49 Yes 0 0 No -28 0.92 Yes 42 92.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20431334 + NM_001243076 E2F3 1 4.69 0.58 31 3.16 70.51 26 5.83 Yes 1 0.15 No 0 0 No -25 0.43 No 45 66.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 20457214 + NM_001243076 E2F3 1 2.92 0.33 19 10.68 89.48 14 5.18 No 1 1.07 Yes 0 0 No -27 0.44 No 43 52.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 20468931 + NM_001243076 E2F3 1 2.33 0.26 17 7.72 88.66 30 5.74 Yes 17 2.44 Yes 0 0 No -29 0.75 Yes 41 73.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20480767 + NM_001243076 E2F3 1 4.69 0.18 11 11.36 79.79 31 5.74 Yes 18 0.9 Yes 0 0 No -30 0.67 Yes 40 71.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20481436 + NM_001243076 E2F3 1 801.57 54.19 72 7.2 82.5 74 8.25 Yes 61 1.56 Yes 28 0.59 Yes -55 0.56 No 23 68.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 67226390 + NM_001950 E2F4 1 0.42 0.97 42 9.6 91.29 33 4.74 No NA NA NA 26 0.39 Yes -19 0.72 Yes 51 79.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67226667 + NM_001950 E2F4 1 1.96 4.58 71 3.17 0 29 5.92 Yes 16 1.14 Yes 0 0 No -28 0.85 Yes 42 80.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67226892 + NM_001950 E2F4 1 0.18 0.46 24 -2.56 0 16 4.36 No 3 0.69 No 21 0.85 Yes -15 0.91 Yes 55 87.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67226963 + NM_001950 E2F4 1 0.06 0.14 8 -11.12 52.38 15 5.48 No 61 1.05 Yes 0 0 No -14 0.43 No 56 41.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67226969 + NM_001950 E2F4 1 0.18 0.49 25 -5.19 0 13 3.87 No 67 1.04 Yes 0 0 No -12 0.63 No 62 28.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67227344 + NM_001950 E2F4 1 0.18 0.4 19 8.5 78.41 15 5.39 No 56 0.51 No 27 0.65 Yes -22 0.66 No 48 78.68 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 67227372 + NM_001950 E2F4 1 0.04 0.11 7 0.59 0 23 5.38 No -4 0.93 Yes 27 0.65 Yes -9 0.71 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 67229056 + NM_001950 E2F4 1 0.17 0.5 28 3.48 83.86 33 5.22 No 47 2.08 Yes 0 0 No -29 0.38 No 42 56.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67229354 + NM_001950 E2F4 1 0.26 0.64 32 6.11 89.06 20 7.14 Yes 7 0.81 Yes 0 0 No -19 0.69 Yes 51 51.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 67231771 + NM_001950 E2F4 1 0.04 0.14 9 -14.72 69.78 25 5.08 No 12 1.25 Yes 0 0 No -24 0.77 Yes 46 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67232033 + NM_001950 E2F4 1 0.13 0.5 31 5.7 84.16 40 6.52 Yes -4 1.17 Yes 30 0.74 Yes -30 0.66 No 40 72.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 86101633 + NM_001083589 E2F5 1 0.67 0.26 13 0.3 0 28 7.55 Yes 15 0.68 No 0 0 No -31 0.79 Yes 39 70.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 86115330 + NM_001083589 E2F5 1 1.3 0.9 41 -2.89 80.42 22 5.5 No 3 0.67 No 0 0 No -21 0.62 No 40 81.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 86118370 + NM_001083589 E2F5 1 0.32 0.24 14 -1.56 0 36 5.96 Yes 17 -2 No 21 0.7 Yes -15 0.4 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 86121514 + NM_001083589 E2F5 1 1.33 1.29 45 1.65 72.07 45 5.6 Yes 32 0.79 Yes 0 0 No -44 0.74 Yes 26 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 86124394 + NM_001083589 E2F5 1 78.27 34.33 72 7.13 87.4 28 5.96 Yes 63 1.07 Yes 24 0.66 Yes -27 0.68 Yes 43 82.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 11586647 - NM_001278277 E2F6 1 1.81 0.35 22 2.15 80.64 39 6.23 Yes 26 0.58 No 0 0 No -38 0.82 Yes 32 77.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 11589409 - NM_001278277 E2F6 1 0.18 0.1 7 8.8 87.11 25 6.71 Yes 12 1.69 Yes 0 0 No -24 0.83 Yes 46 91.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 11589624 - NM_001278277 E2F6 1 0.67 0.43 22 12.23 92.54 22 5.29 No 9 0.99 Yes 0 0 No -21 0.93 Yes 49 95.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 11591395 - NM_001278277 E2F6 1 0.33 0.13 7 7.28 69.85 23 6.24 Yes 10 0.91 Yes 0 0 No -22 0.72 Yes 48 65.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 11593849 - NM_001278277 E2F6 1 2.47 0.18 13 4.45 74.29 47 7.55 Yes 56 0.31 No 26 0.82 Yes -27 0.63 No 43 61.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 11593849 - NM_001278277 E2F6 1 8.89 0.68 32 4.45 74.29 47 7.55 Yes 56 0.31 No 26 0.82 Yes -27 0.63 No 43 61.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 11593922 - NM_001278277 E2F6 1 3.99 0.33 21 3.5 77.75 37 6.04 Yes 50 -2.43 No 0 0 No -29 0.47 No 41 32.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 11593922 - NM_001278277 E2F6 1 10.36 0.47 26 3.5 77.75 37 6.04 Yes 50 -2.43 No 0 0 No -29 0.47 No 41 32.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 11593922 - NM_001278277 E2F6 1 3.99 0.29 15 3.5 77.75 37 6.04 Yes 50 -2.43 No 0 0 No -29 0.47 No 41 32.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 11595596 - NM_001278277 E2F6 1 8.27 0.26 15 2.59 0 49 6.06 Yes 54 1.64 Yes 0 0 No -28 0.57 No 42 53.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 77435869 - NM_203394 E2F7 1 0.53 0.35 18 6.11 75.07 29 8.03 Yes 16 1.47 Yes 0 0 No -28 0.84 Yes 42 83.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 77436975 - NM_203394 E2F7 1 0.37 0.42 21 0.29 0 33 5.45 No 14 1.12 Yes 0 0 No -26 0.62 No 44 64.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 77438050 - NM_203394 E2F7 1 0.81 0.93 38 5.49 80.91 48 7.35 Yes 35 1.34 Yes 23 0.73 Yes -47 0.92 Yes 23 94.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 77439314 - NM_203394 E2F7 1 0.15 0.15 11 7.41 83.24 25 4.98 No 12 0.62 No 0 0 No -24 0.83 Yes 46 90.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 77440726 - NM_203394 E2F7 1 0.25 0.19 12 6.58 85.68 24 5 No 70 -0.9 No 0 0 No -24 0.6 No 47 81.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 77441404 - NM_203394 E2F7 1 0.26 0.25 15 4.58 80.57 34 6.25 Yes 5 0.74 No 0 0 No -33 0.61 No 37 78.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 77446443 - NM_203394 E2F7 1 4.11 3.82 62 10.03 88.85 26 5.07 No 65 1.45 Yes 0 0 No -25 0.72 Yes 45 84.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 77449928 - NM_203394 E2F7 1 0.14 0.13 8 4.21 71.69 31 6.48 Yes 18 1.53 Yes 21 0.81 Yes -30 0.83 Yes 40 89.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 77458434 - NM_203394 E2F7 1 1.84 1.28 41 4.56 70.19 21 6.48 Yes 8 0.55 No 20 0.86 Yes -20 0.78 Yes 50 89.92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 19246972 - NM_024680 E2F8 1 0.31 0.21 13 7.19 84.75 16 4.6 No 3 0.73 No 0 0 No -25 0.93 Yes 45 94.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 19247092 - NM_024680 E2F8 1 2.6 1.57 49 1.33 63.37 43 7.46 Yes 30 1.59 Yes 0 0 No -42 0.79 Yes 28 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 19249625 - NM_024680 E2F8 1 1.11 0.58 26 4.06 0 27 8.94 Yes 14 2.33 Yes 0 0 No -26 0.9 Yes 44 91.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 19253844 - NM_024680 E2F8 1 0.82 0.53 25 -0.34 0 20 4.55 No 55 -5.39 No 0 0 No -22 0.92 Yes 48 97.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2276229 + NM_001288778 E4F1 1 0.4 0.13 7 10.38 87.3 40 6.63 Yes 27 0.78 Yes 0 0 No -39 0.93 Yes 31 94.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2278292 + NM_001288778 E4F1 1 2.6 0.72 37 5.96 72.13 28 6.86 Yes 72 1.17 Yes 27 0.86 Yes -27 0.87 Yes 43 89.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2282491 + NM_001288778 E4F1 1 0.54 0.24 14 2.64 75.32 24 5.36 No 46 0.94 Yes 0 0 No -23 0.94 Yes 47 86.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15471422 + NM_033083 EAF1 1 0.15 0.11 7 -3.17 0 29 5.92 Yes 28 1 Yes 0 0 No -28 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 15471853 + NM_033083 EAF1 1 0.11 0.13 9 5.62 79.96 24 6.4 Yes 54 0.55 No 0 0 No -23 0.86 Yes 47 84.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121555035 + NM_018456 EAF2 1 0.06 0.15 8 1.67 61.5 34 5.14 No 21 0.38 No 33 0.63 Yes -33 0.56 No 37 58.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 121555491 + NM_018456 EAF2 1 2.83 6.94 72 7.91 89.25 32 4.93 No 36 0.19 No 31 0.83 Yes -31 0.88 Yes 39 90.05 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 121561973 + NM_018456 EAF2 1 0.05 0.14 8 7.13 82.33 24 6.86 Yes 25 0.73 No 0 0 No -23 0.76 Yes 47 77.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121592843 + NM_018456 EAF2 1 0.32 0.64 29 9.33 82.99 29 6.96 Yes 7 0.72 No 0 0 No -34 0.54 No 36 71.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 121600049 + NM_018456 EAF2 1 0.21 0.51 21 7.58 84.79 31 5.57 Yes 18 1.38 Yes 0 0 No -30 0.66 No 40 60.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 121603838 + NM_018456 EAF2 1 0.07 0.15 9 9.76 89.14 23 7.12 Yes 10 1.08 Yes 0 0 No -22 0.6 No 48 71.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 34988135 - NM_018453 EAPP 1 0.13 0.13 8 0.44 0 41 7.32 Yes 9 1.28 Yes 0 0 No -40 0.57 No 30 85.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 34988139 - NM_018453 EAPP 1 1.62 1.54 50 6.57 80.26 37 7.05 Yes 5 1.3 Yes 0 0 No -36 0.68 Yes 34 89.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 34998677 - NM_018453 EAPP 1 0.14 0.19 13 0.78 0 40 4.79 No 9 1.16 Yes 0 0 No -33 0.65 No 37 90.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23535772 - NM_001083614 EARS2 1 0.15 0.17 9 0.64 0 33 6.22 Yes 52 1.13 Yes 0 0 No -33 0.64 No 38 55.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23541239 - NM_001083614 EARS2 1 0.95 0.72 34 -9.77 0 13 4.12 No 66 0.94 Yes 37 0.07 Yes -12 0.81 Yes 58 75.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 23543672 - NM_001083614 EARS2 1 0.22 0.18 11 3.14 75.22 41 6.05 Yes 28 0.22 No 0 0 No -22 0.66 Yes 48 55.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23545367 - NM_001083614 EARS2 1 0.42 0.35 17 3.62 0 27 6.99 Yes 71 1.4 Yes 0 0 No -27 0.73 Yes 43 91.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23557756 - NM_001083614 EARS2 1 1.09 0.9 35 10.4 88.58 36 4.39 No 46 0.79 Yes 24 0.7 Yes -21 0.68 Yes 49 82.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 23564445 - NM_001083614 EARS2 1 1.47 0.65 32 2.34 0 28 7.29 Yes 48 0.92 Yes 27 0.67 Yes -27 0.77 Yes 43 75.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 110566961 + NM_198120 EBAG9 1 0.49 0.69 34 -0.81 0 29 6.2 Yes 47 1.08 Yes 0 0 No -28 0.53 No 42 74.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 110569959 + NM_198120 EBAG9 1 0.1 0.11 7 1.3 0 13 4 No 14 1.48 Yes 26 0.93 Yes -26 0.88 Yes 44 89.22 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 110575625 + NM_198120 EBAG9 1 0.75 0.93 45 8.32 83.4 64 7.85 Yes -3 1.6 Yes 29 0.49 Yes -29 0.43 No 41 50.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 110575708 + NM_198120 EBAG9 1 0.22 0.29 19 1.7 69.3 63 8.69 Yes 50 0.95 Yes 0 0 No -42 0.43 No 28 62.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 110576671 + NM_198120 EBAG9 1 0.36 0.46 22 0.86 0 24 5.29 No 17 0.28 No 25 0.86 Yes -29 0.62 No 41 38.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 158135179 - NM_001324111 EBF1 1 2.09 0.78 37 4.39 70.22 32 6.76 Yes 19 1.64 Yes 0 0 No -31 0.87 Yes 39 91.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 158186333 - NM_001324111 EBF1 1 0.13 0.11 8 3.74 63.09 37 8.19 Yes 24 1.12 Yes 0 0 No -37 0.73 Yes 33 69.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 158217113 - NM_001324111 EBF1 1 0.82 0.39 22 8.66 91.47 31 5.74 Yes 18 1.27 Yes 0 0 No -30 0.97 Yes 40 98.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 158223484 - NM_001324111 EBF1 1 221.68 31.03 72 0.92 65.01 42 6.56 Yes 29 1.52 Yes 41 0.31 Yes -41 0.89 Yes 29 94.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 158253211 - NM_001324111 EBF1 1 0.4 0.11 7 9.67 89.46 47 7.75 Yes 34 1.42 Yes 0 0 No -21 0.77 Yes 49 55.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 158368988 - NM_001324111 EBF1 1 0.32 0.19 10 10.15 92.32 28 5.35 No 15 1 Yes 0 0 No -27 0.73 Yes 43 89.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 158382329 - NM_001324111 EBF1 1 3.08 1.54 51 12.23 87.64 30 8.12 Yes 17 1.16 Yes 0 0 No -29 0.6 No 37 64.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 158448058 - NM_001324111 EBF1 1 0.24 0.1 7 -3.41 0 17 4.24 No 4 0.08 No 0 0 No -19 0.41 No 54 40.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 158498131 - NM_001324111 EBF1 1 1.67 0.9 38 6.07 96.81 28 5.09 No 15 0.1 No 0 0 No -20 0.65 No 50 76.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 158510779 - NM_001324111 EBF1 1 0.79 0.67 27 5.75 85.46 22 6.08 Yes 9 1.34 Yes 0 0 No -21 0.86 Yes 49 82.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 158524736 - NM_001324111 EBF1 1 0.69 0.14 8 10.94 86.03 30 5.76 Yes 31 -2.01 No 0 0 No -29 0.58 No 40 70.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 4233451 + NM_005755 EBI3 1 0.03 0.15 11 8.97 80.64 27 6.69 Yes 14 2.36 Yes 0 0 No -26 0.91 Yes 44 87.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4234668 + NM_005755 EBI3 1 0.02 0.15 8 -2.84 0 31 6.57 Yes 18 2.56 Yes 0 0 No -30 0.81 Yes 40 77.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37084195 + NR_036592 EBLN3P 1 3.44 5.78 72 5.94 86.67 54 7.46 Yes 68 -2.94 No 26 0.45 Yes -53 0.76 Yes 20 78.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 43630188 - NM_001159936 EBNA1BP2 1 0.1 0.42 24 2.14 74.36 18 4.9 No 39 0.28 No 28 0.89 Yes -51 0.4 No 60 37.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 43630237 - NM_001159936 EBNA1BP2 1 0.05 0.19 12 12.31 83.67 21 5.45 No 28 1.49 Yes 0 0 No -23 0.52 No 30 56.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 43630493 - NM_001159936 EBNA1BP2 1 0.09 0.24 13 -0.39 0 9 4.36 No 73 0.39 No 24 0.74 Yes -32 0.42 No 48 69.66 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 43637635 - NM_001159936 EBNA1BP2 1 0.03 0.11 7 2.27 0 10 3.09 No 14 1.24 Yes 0 0 No -26 0.93 Yes 44 91.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48380532 + NM_006579 EBP 1 0.59 0.43 22 9.88 76.93 24 7 Yes 11 1.61 Yes 23 0.97 Yes -23 0.92 Yes 47 89.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48380580 + NM_006579 EBP 1 3.02 2.01 60 13.41 94.9 23 6.46 Yes 59 1.61 Yes 22 0.67 Yes -22 0.84 Yes 48 80.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48382141 + NM_006579 EBP 1 7.19 4.88 71 4.19 73.04 58 6.15 Yes 67 1.01 Yes 23 0.81 Yes -23 0.8 Yes 13 53.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 48382277 + NM_006579 EBP 1 0.2 0.15 10 9.6 91.5 49 6.69 Yes 33 1.6 Yes 26 0.87 Yes -26 0.45 No 48 72.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 48382310 + NM_006579 EBP 1 6.44 4.43 68 3.82 78.45 20 5.74 Yes 66 1.59 Yes 26 0.87 Yes -19 0.6 No 51 63.29 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 48382370 + NM_006579 EBP 1 1.97 1.38 50 7.43 77.97 24 7.66 Yes 74 -2.15 No 0 0 No -23 0.79 Yes 47 71.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48386657 + NM_006579 EBP 1 0.21 0.46 22 8.53 85.47 41 6.12 Yes 59 1.35 Yes 0 0 No -27 0.71 Yes 43 70.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 50236064 - NR_103802 EBPL 1 0.17 0.17 10 12.6 89.29 35 6.95 Yes 22 1.02 Yes 34 0.38 Yes -35 0.68 Yes 35 82.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 50242706 - NR_103802 EBPL 1 1.04 0.6 35 11.64 99.55 28 7.32 Yes 36 1.28 Yes 27 0.91 Yes -27 0.82 Yes 43 88.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 50242706 - NR_103802 EBPL 1 0.42 0.28 15 11.64 99.55 28 7.32 Yes 36 1.28 Yes 27 0.91 Yes -27 0.82 Yes 43 88.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 74894603 - NM_001135752 ECD 1 0.1 0.14 9 -3.29 60.15 43 5.74 Yes 0 0.12 No 28 0.43 Yes -46 0.62 No 42 52.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 74899239 - NM_001135752 ECD 1 0.18 0.22 15 -7.95 0 13 4 No 71 0.93 Yes 0 0 No -40 0.56 No 30 66.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 74914154 - NM_001135752 ECD 1 0.11 0.19 11 7.13 87.11 25 5.19 No 17 0.48 No 0 0 No -24 0.96 Yes 46 96.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 74916542 - NM_001135752 ECD 1 0.07 0.1 7 7.86 83.05 32 6.34 Yes 19 0.76 No 0 0 No -32 0.58 No 44 62.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 21547126 - NM_001397 ECE1 1 0.1 0.1 7 5.24 85.02 17 6.93 Yes 52 1.08 Yes 0 0 No -29 0.5 No 43 48.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 21551449 - NM_001397 ECE1 1 0.18 0.1 7 10.88 92.97 29 5.66 Yes 16 0.61 No 0 0 No -28 0.74 Yes 42 74.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 21560317 - NM_001397 ECE1 1 0.36 0.19 11 7.11 84.71 20 5.14 No 7 0.2 No 0 0 No -28 0.89 Yes 42 87.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 21582599 - NM_001397 ECE1 1 0.37 0.19 12 0.75 70.11 28 6.48 Yes 15 0.44 No 0 0 No -27 0.68 Yes 43 87.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 21601689 - NM_001397 ECE1 1 0.21 0.1 7 9.36 83.52 28 4.46 No -4 0.7 No 0 0 No -27 0.88 Yes 43 93.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 21615967 - NM_001397 ECE1 1 0.33 0.17 9 9.57 86.18 28 5.47 No 15 0.35 No 0 0 No -27 0.83 Yes 43 85.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39307026 - NM_001398 ECH1 1 0.25 0.88 38 -0.32 65.13 17 4.8 No 69 -3.4 No 20 0.82 Yes -23 0.45 No 47 45.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 39318684 - NM_001398 ECH1 1 0.03 0.15 9 8.78 87.15 19 6.04 Yes 61 0.47 No 0 0 No -42 0.47 No 28 54.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39320781 - NM_001398 ECH1 1 0.23 1.32 46 9.62 94.44 27 6.03 Yes 56 1.59 Yes 0 0 No -22 0.69 Yes 48 72.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39322148 - NM_001398 ECH1 1 0.07 0.17 9 -1.19 0 12 4.24 No 56 0.94 Yes 0 0 No -35 0.84 Yes 35 87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 127634737 - NM_001002030 ECHDC1 1 0.32 0.83 36 3.91 87.52 16 5.1 No 3 0.84 Yes 32 0.33 Yes -19 0.45 No 51 73.68 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 127637120 - NM_001002030 ECHDC1 1 1.2 2.22 62 6.29 75.04 14 4.79 No 1 1.02 Yes 27 0.86 Yes -27 0.9 Yes 43 85.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 127637120 - NM_001002030 ECHDC1 1 0.1 0.19 14 6.29 75.04 14 4.79 No 1 1.02 Yes 27 0.86 Yes -27 0.9 Yes 43 85.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 127647720 - NM_001002030 ECHDC1 1 0.37 0.89 41 6.61 93.47 16 3.77 No 39 0.65 No 26 0.82 Yes -26 0.88 Yes 44 87.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 127651028 - NM_001002030 ECHDC1 1 1.32 2.03 59 7.74 84.09 22 5.63 Yes 9 0.83 Yes 27 0.59 Yes -21 0.53 No 49 63.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 127653013 - NM_001002030 ECHDC1 1 3.09 1.42 51 9.42 82.58 24 5.36 No 66 -3.35 No 23 0.38 Yes -23 0.46 No 35 56.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 53362173 - NM_001319958 ECHDC2 1 0.61 0.13 9 7.55 85.74 21 7.42 Yes 8 1.5 Yes 0 0 No -25 0.42 No 50 55.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 53364392 - NM_001319958 ECHDC2 1 1.92 0.21 12 6.51 74.8 33 6.59 Yes 55 1.71 Yes 0 0 No -32 0.78 Yes 38 77.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 53364427 - NM_001319958 ECHDC2 1 1.05 0.14 10 6.9 74.8 33 8.36 Yes 20 1.71 Yes 0 0 No -32 0.87 Yes 38 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11792476 + NM_024693 ECHDC3 1 2.15 0.54 31 5.02 74.76 46 7.87 Yes 33 1.94 Yes 0 0 No -45 0.91 Yes 25 95.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 135177281 - NM_004092 ECHS1 1 0.07 0.31 18 3.2 0 40 6.83 Yes 46 0.83 Yes 0 0 No -39 0.4 No 37 39.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 135180751 - NM_004092 ECHS1 1 0.07 0.24 13 4.44 70.21 28 10.59 Yes 15 1.73 Yes 0 0 No -27 0.72 Yes 43 62.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2292650 - NM_001919 ECI1 1 0.53 0.76 35 12.61 90.04 23 5.39 No 62 1.7 Yes 0 0 No -22 0.91 Yes 48 93.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2293218 - NM_001919 ECI1 1 0.2 0.36 20 -6.14 0 11 4.12 No 17 0.37 No 0 0 No -29 0.91 Yes 41 93.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2294312 - NM_001919 ECI1 1 0.3 0.47 23 7.45 81.29 20 6.24 Yes NA NA NA 0 0 No -19 0.51 No 40 46.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2296241 - NM_001919 ECI1 1 0.11 0.14 9 3.09 0 14 4.47 No 1 0.75 No 0 0 No -35 0.88 Yes 35 93.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 4119540 - NM_001166010 ECI2 1 0.18 0.19 13 -2.46 57.17 46 5.43 No 19 -1.91 No 30 0.18 Yes -31 0.85 Yes 58 37.16 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 4124195 - NM_001166010 ECI2 1 0.16 0.14 8 7.28 85.05 18 7.59 Yes 50 1.35 Yes 0 0 No -26 0.59 No 44 57.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 4130484 - NM_001166010 ECI2 1 0.14 0.13 9 7.95 92.25 27 5.54 No 32 0 No 26 0.72 Yes -26 0.49 No 38 59.48 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 11621476 - NM_001243204 ECSIT 1 0.93 0.78 33 7.04 88.72 24 5.2 No 11 1.23 Yes 23 0.91 Yes -23 0.93 Yes 47 93.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11621476 - NM_001243204 ECSIT 1 0.25 0.19 12 7.04 88.72 24 5.2 No 11 1.23 Yes 23 0.91 Yes -23 0.93 Yes 47 93.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11622306 - NM_001243204 ECSIT 1 0.37 0.26 10 10.58 91.33 37 6.16 Yes 24 1.3 Yes 0 0 No -36 0.96 Yes 34 97.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11623583 - NM_001243204 ECSIT 1 0.13 0.11 8 9.4 95.65 28 7.55 Yes 15 0.55 No 0 0 No -27 0.92 Yes 43 95.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 11624100 - NM_001243204 ECSIT 1 2.31 2.88 67 3.97 76.68 24 5.48 No 64 2.41 Yes 23 0.89 Yes -23 0.67 Yes 47 61.53 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 172469939 + NM_018098 ECT2 1 22.86 12.49 72 8.35 88.27 25 5.19 No 71 0.44 No 24 0.88 Yes -24 0.87 Yes 46 89.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 172473087 + NM_018098 ECT2 1 0.79 0.65 29 -2.48 69.42 35 5.58 Yes 12 0.64 No 28 0.46 Yes -28 0.57 No 42 63.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 172473272 + NM_018098 ECT2 1 5.09 3.56 68 7.56 89.71 24 4.4 No 16 1.36 Yes 23 0.86 Yes -23 0.85 Yes 47 84.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 172477922 + NM_018098 ECT2 1 0.14 0.1 7 -5.49 0 42 5.74 Yes 1 0.17 No 25 0.86 Yes -31 0.41 No 57 27.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 172477950 + NM_018098 ECT2 1 1.12 0.63 28 1.67 0 20 5.42 No 29 0.56 No 0 0 No -30 0.77 Yes 40 86.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 172480187 + NM_018098 ECT2 1 0.66 0.35 20 -2.39 68.61 16 4.29 No 69 -5.52 No 21 0.64 Yes -20 0.5 No 49 60.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 172480294 + NM_018098 ECT2 1 0.32 0.1 7 4.84 78.29 20 4.67 No 8 -2.69 No 0 0 No -25 0.68 Yes 45 85.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 172492812 + NM_018098 ECT2 1 0.28 0.24 15 10.05 86.93 26 4.67 No 28 0.94 Yes 0 0 No -25 0.95 Yes 45 96.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 172495805 + NM_018098 ECT2 1 0.1 0.11 7 6.94 90.63 25 5.29 No 66 0.57 No 0 0 No -24 0.9 Yes 46 89.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 172507502 + NM_018098 ECT2 1 0.35 0.29 16 8.85 80.9 25 6.32 Yes 12 1.28 Yes 0 0 No -24 0.54 No 46 69.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 172515009 + NM_018098 ECT2 1 0.56 0.51 29 9.85 88.27 25 6 Yes 12 1.3 Yes 0 0 No -24 0.85 Yes 46 87.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 172523524 + NM_018098 ECT2 1 0.12 0.13 8 -2.46 0 30 6.93 Yes 17 1.63 Yes 0 0 No -33 0.75 Yes 37 78.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 172524614 + NM_018098 ECT2 1 0.27 0.24 13 5.12 85.02 19 7.02 Yes 6 1.26 Yes 0 0 No -29 0.67 Yes 41 70.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 172525430 + NM_018098 ECT2 1 0.13 0.14 7 7.05 71.45 34 5.58 Yes 13 1.33 Yes 0 0 No -34 0.63 No 36 73.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 172536337 + NM_018098 ECT2 1 3.24 2.39 60 8.72 89.65 38 7.06 Yes 25 1.45 Yes 24 0.85 Yes -24 0.46 No 38 66.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 236580822 + NM_080738 EDARADD 1 6.18 0.56 29 9.91 87.51 28 6.69 Yes 56 0.64 No 0 0 No -27 0.69 Yes 43 78.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 74925310 - NM_001142443 EDC3 1 0.39 0.51 28 -0.28 0 15 4.36 No 40 1.12 Yes 24 0.81 Yes -35 0.61 No 56 68.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 67909640 + NM_014329 EDC4 1 1.14 0.64 29 8.51 85.68 23 6.24 Yes 10 0.97 Yes 22 0.78 Yes -22 0.79 Yes 48 78.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67911392 + NM_014329 EDC4 1 0.14 0.15 11 6.71 74.78 25 6.55 Yes 12 1.08 Yes 25 0.77 Yes -24 0.92 Yes 46 87.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67912239 + NM_014329 EDC4 1 0.14 0.17 11 3.54 75.45 28 3.69 No 68 -3.99 No 29 0.93 Yes -23 0.41 No 52 33.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67913284 + NM_014329 EDC4 1 0.08 0.11 7 -0.81 74.84 17 7.48 Yes 4 2.23 Yes 24 0.74 Yes -25 0.42 No 45 69.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 67913769 + NM_014329 EDC4 1 0.09 0.11 7 2.19 81.34 15 5.1 No 44 0.31 No 0 0 No -23 0.38 No 34 72.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 67913772 + NM_014329 EDC4 1 0.16 0.18 11 6.99 80.99 18 5.39 No 47 0.31 No 0 0 No -26 0.42 No 50 65.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67914568 + NM_014329 EDC4 1 0.24 0.21 14 6.96 83.79 16 6.4 Yes 3 1.79 Yes 0 0 No -34 0.46 No 37 67.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67914984 + NM_014329 EDC4 1 0.39 0.38 22 3.21 0 9 3.87 No 13 0.59 No 0 0 No -25 0.81 Yes 45 91.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67916359 + NM_014329 EDC4 1 0.23 0.33 16 3.3 70.6 36 5.77 Yes 6 1.55 Yes 0 0 No -22 0.56 No 48 38.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67916867 + NM_014329 EDC4 1 0.15 0.18 12 2.41 0 17 3.98 No 9 1.47 Yes 0 0 No -25 0.52 No 40 66.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67917750 + NM_014329 EDC4 1 3.82 5.33 72 8.52 87.41 45 7.2 Yes 32 2.06 Yes 0 0 No -31 0.43 No 43 57.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 5233954 + NM_014674 EDEM1 1 2.58 7.03 71 11.64 91.9 32 7.42 Yes 19 1.57 Yes 0 0 No -31 0.95 Yes 39 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 5235306 + NM_014674 EDEM1 1 0.14 0.31 19 3.01 0 25 6.24 Yes 12 0.84 Yes 0 0 No -24 0.74 Yes 46 65.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 5236570 + NM_014674 EDEM1 1 0.08 0.19 12 -6.09 0 20 4.13 No 75 1.04 Yes 0 0 No -28 0.35 No 51 54.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 5246083 + NM_014674 EDEM1 1 0.1 0.47 24 4.13 0 41 6.27 Yes 65 1.64 Yes 0 0 No -49 0.66 No 21 52.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 5252806 + NM_014674 EDEM1 1 0.05 0.32 17 -19.96 0 23 5.1 No 10 1.44 Yes 0 0 No -22 0.93 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 5253949 + NM_014674 EDEM1 1 0.08 0.39 21 9 83.5 37 6.5 Yes 32 0.75 No 0 0 No -36 0.6 No 34 54.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 5255571 + NM_014674 EDEM1 1 0.5 3.56 67 10.31 76.43 21 6.09 Yes 8 1.62 Yes 0 0 No -25 0.59 No 45 68.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 5258920 + NM_014674 EDEM1 1 0.02 0.13 7 5.16 82.22 35 7.14 Yes 22 1.36 Yes 0 0 No -34 0.7 Yes 36 79.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33703762 - NM_001145025 EDEM2 1 4.82 3.51 69 3.66 76.02 33 6.69 Yes 20 2.17 Yes 0 0 No -23 0.58 No 47 68.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 33703762 - NM_001145025 EDEM2 1 0.9 0.65 33 3.66 76.02 33 6.69 Yes 20 2.17 Yes 0 0 No -23 0.58 No 47 68.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 33705657 - NM_001145025 EDEM2 1 3.05 2.19 60 8.61 76.98 24 5.4 No 1 0.9 Yes 0 0 No -23 0.74 Yes 47 80.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33714820 - NM_001145025 EDEM2 1 0.2 0.17 11 8.3 92.05 21 6.98 Yes 8 0.4 No 0 0 No -20 0.53 No 47 65.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33721959 - NM_001145025 EDEM2 1 8.16 4.56 71 8.22 88.93 28 5.2 No 15 0.6 No 27 0.87 Yes -27 0.86 Yes 43 85.08 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 33722284 - NM_001145025 EDEM2 1 0.77 0.44 22 7.27 85.97 19 5 No 14 0.7 No 0 0 No -26 0.86 Yes 44 78.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33725803 - NM_001145025 EDEM2 1 0.29 0.32 18 -1.41 0 15 3.87 No 48 1.14 Yes 0 0 No -30 0.36 No 40 82.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 33730301 - NM_001145025 EDEM2 1 0.46 0.29 15 0.25 0 17 4.58 No 24 1.16 Yes 27 0.88 Yes -21 0.61 No 49 67.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 184672087 - NR_135118 EDEM3 1 0.89 0.51 25 10.41 84.28 21 5.57 Yes 8 0.99 Yes 0 0 No -20 0.77 Yes 50 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 184677345 - NR_135118 EDEM3 1 1.04 0.65 32 7.05 92.76 17 3.89 No 71 -2.09 No 28 0.55 Yes -30 0.47 No 40 71.85 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 184677950 - NR_135118 EDEM3 1 0.53 0.33 20 10.08 92.46 25 6 Yes 61 1.59 Yes 0 0 No -24 0.8 Yes 46 88.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 184679680 - NR_135118 EDEM3 1 0.15 0.11 7 -14.39 0 30 5.24 No 71 0.98 Yes 0 0 No -29 0.69 Yes 41 81.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 184679685 - NR_135118 EDEM3 1 12.73 8.94 72 5.31 72.83 25 4.86 No 66 0.99 Yes 27 0.78 Yes -24 0.69 Yes 46 80.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 139757451 - NM_153200 EDF1 1 0.01 0.17 11 -13.35 0 21 5.1 No 17 0.66 No 0 0 No -21 0.58 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139759761 - NM_153200 EDF1 1 0.08 0.53 26 3.06 81.75 24 5.17 No 24 -2.73 No 0 0 No -20 0.59 No 50 52.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 12292576 + NM_001955 EDN1 1 16.27 2.72 61 6.64 82.89 25 6.78 Yes 12 2.55 Yes 0 0 No -24 0.91 Yes 46 94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 12294149 + NM_001955 EDN1 1 0.38 0.13 8 2.43 67.09 26 3.88 No 60 0.38 No 30 0.92 Yes -25 0.28 No 45 30 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 127409750 + NR_110859 EDRF1 1 0.64 0.54 25 1.99 75.25 14 4.1 No 50 1.08 Yes 29 0.83 Yes -17 0.35 No 53 71.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 127409779 + NR_110859 EDRF1 1 0.16 0.14 7 -5.45 0 13 4 No 30 0.63 No 0 0 No -12 0.69 Yes 34 62.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 127409851 + NR_110859 EDRF1 1 1.04 0.9 42 8.03 78.83 29 6.71 Yes 16 0.61 No 0 0 No -28 0.42 No 38 37.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 127420433 + NR_110859 EDRF1 1 9.69 8.31 72 6.05 80.39 38 5.93 Yes 25 0.91 Yes 29 0.65 Yes -29 0.51 No 41 52.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 127424243 + NR_110859 EDRF1 1 0.35 0.57 30 5.17 84.48 37 4.03 No 49 0.51 No 0 0 No -36 0.64 No 42 52.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 127426491 + NR_110859 EDRF1 1 0.73 0.79 36 1.56 0 30 5.2 No 71 0.77 Yes 24 0.79 Yes -29 0.84 Yes 41 86.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 127429024 + NR_110859 EDRF1 1 0.09 0.11 7 4.84 0 30 6.39 Yes 17 0.11 No 35 0.3 Yes -28 0.57 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 127430788 + NR_110859 EDRF1 1 3.73 3.22 60 2.29 80.9 28 6.96 Yes 58 0.56 No 28 0.92 Yes -28 0.84 Yes 42 85.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 127436426 + NR_110859 EDRF1 1 1.97 2.56 67 1 59.49 27 6.14 Yes 14 0.09 No 31 0.8 Yes -26 0.67 Yes 44 87.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 127442892 + NR_110859 EDRF1 1 0.08 0.13 9 6.19 71.73 32 5.94 Yes 19 0.18 No 0 0 No -31 0.74 Yes 39 86.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 127449796 + NR_110859 EDRF1 1 0.08 0.14 9 13.28 97.46 27 6.3 Yes 36 0.05 No 26 0.55 Yes -27 0.44 No 39 61.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 93175905 - NM_003566 EEA1 1 0.49 0.46 26 0.24 0 10 4 No 61 0.83 Yes 0 0 No -31 0.44 No 39 63.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 93178801 - NM_003566 EEA1 1 0.5 0.49 26 8.28 85.05 23 5.29 No 18 0.2 No 0 0 No -25 0.65 No 45 52.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 93180027 - NM_003566 EEA1 1 1.4 1.33 50 7.86 84.24 29 4.8 No 16 0.76 No 0 0 No -28 0.79 Yes 42 73.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 93181822 - NM_003566 EEA1 1 1.53 2.03 50 0.85 0 22 7.75 Yes 41 0.55 No 0 0 No -25 0.41 No 45 44.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 93189223 - NM_003566 EEA1 1 0.37 0.49 20 5.47 69.42 37 6.32 Yes 42 0.5 No 0 0 No -25 0.49 No 45 80.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 93194698 - NM_003566 EEA1 1 3.68 4.56 70 6.97 73.83 29 5.65 Yes 40 -3.5 No 0 0 No -28 0.92 Yes 42 95.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 93194868 - NM_003566 EEA1 1 0.17 0.19 11 6.56 89.91 20 7.33 Yes 7 1.26 Yes 0 0 No -19 0.77 Yes 51 74.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 93195495 - NM_003566 EEA1 1 0.09 0.13 7 4.36 73.29 28 3.45 No 75 0.12 No 23 0.91 Yes -33 0.35 No 37 56.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 93206105 - NM_003566 EEA1 1 2.01 1.49 49 10.72 88.27 31 5.62 Yes 18 0.7 No 0 0 No -30 0.48 No 40 61.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 93207781 - NM_003566 EEA1 1 0.14 0.14 9 3.08 0 56 10.52 Yes 43 0.19 No 0 0 No -55 0.58 No 15 63.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 93209459 - NM_003566 EEA1 1 0.18 0.18 11 7.84 88.07 50 6.39 Yes 71 1.01 Yes 0 0 No -22 0.88 Yes 48 84.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 93214893 - NM_003566 EEA1 1 3.78 2.61 62 9.45 95.29 28 6.74 Yes 15 0.18 No 26 0.15 Yes -28 0.55 No 42 56.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 93220056 - NM_003566 EEA1 1 0.25 0.26 18 -0.31 0 9 3.6 No 14 0.66 No 0 0 No -26 0.77 Yes 44 70.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 93246071 - NM_003566 EEA1 1 0.14 0.19 10 -10.93 0 29 8.03 Yes 16 1.01 Yes 0 0 No -28 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 93247728 - NM_003566 EEA1 1 1.35 1.1 44 -9.3 74.75 59 6.16 Yes 55 1.34 Yes 0 0 No -32 0.79 Yes 38 87.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 93273140 - NM_003566 EEA1 1 0.64 0.38 19 7.6 90.88 43 6.54 Yes 52 1.12 Yes 36 0.08 Yes -36 0.59 No 34 75.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 93273186 - NM_003566 EEA1 1 0.49 0.32 16 9.28 86.07 33 5.22 No 6 1.15 Yes 0 0 No -32 0.45 No 38 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 93299373 - NM_003566 EEA1 1 0.5 0.25 15 2.56 0 35 6 Yes 74 0.62 No 34 0.44 Yes -34 0.73 Yes 36 73.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 85960512 + NM_001308007 EED 1 0.43 1.61 53 7.41 86.07 23 4.1 No 6 0.45 No 0 0 No -22 0.74 Yes 48 58.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 85966463 + NM_001308007 EED 1 0.07 0.28 18 2.51 68.16 45 6.82 Yes 13 1.58 Yes 0 0 No -25 0.6 No 45 69.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 85974328 + NM_001308007 EED 1 0.11 0.39 19 8.01 90.64 22 5.2 No 9 1.23 Yes 0 0 No -21 0.62 No 49 80.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 85982068 + NM_001308007 EED 1 0.46 0.22 16 9.19 70.83 32 6.92 Yes 19 1.56 Yes 0 0 No -31 0.93 Yes 39 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 85988813 + NM_001308007 EED 1 0.35 0.69 35 3.37 80.13 29 6.65 Yes 16 0.89 Yes 0 0 No -28 0.82 Yes 42 75.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 85988949 + NM_001308007 EED 1 0.08 0.15 9 -1.57 0 22 5.46 No 18 0.81 Yes 26 0.8 Yes -21 0.77 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 74227966 - NM_001402 EEF1A1 1 0 0.44 27 3.51 79.74 20 5.56 Yes 31 0.93 Yes 0 0 No -25 0.51 No 27 54.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 74228259 - NM_001402 EEF1A1 1 0 0.57 29 3.95 82.49 14 6.45 Yes 1 1.11 Yes 0 0 No -31 0.93 Yes 39 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 74228316 - NM_001402 EEF1A1 1 0 0.13 8 -4.73 0 21 5.2 No 17 0.31 No 0 0 No -20 0.43 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 74228322 - NM_001402 EEF1A1 1 0 0.14 10 -7.87 0 15 4.58 No 11 0.31 No 0 0 No -34 0.76 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 74228333 - NM_001402 EEF1A1 1 0 0.18 12 -4.3 0 13 4.77 No 0 0.3 No 0 0 No -23 0.92 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 74228340 - NM_001402 EEF1A1 1 0 0.18 13 -8.14 0 17 4.8 No 34 0.09 No 22 0.76 Yes -16 0.74 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 74228354 - NM_001402 EEF1A1 1 0 0.17 11 -2.06 0 13 4.12 No 20 0.09 No 22 0.76 Yes -32 0.7 Yes 38 88.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 74228557 - NM_001402 EEF1A1 1 0 0.13 9 1.35 77.37 18 4.9 No 30 0.29 No 0 0 No -42 0.86 Yes 28 97.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 74229219 - NM_001402 EEF1A1 1 0 0.35 21 -5.2 0 16 3.12 No 29 0.96 Yes 0 0 No -41 0.58 No 21 52.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 74229231 - NM_001402 EEF1A1 1 0 2.25 65 -8.06 0 14 4.24 No 17 0.94 Yes 0 0 No -29 0.59 No 41 33.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 74229799 - NM_001402 EEF1A1 1 0 0.15 8 -5.71 0 17 4.36 No 60 0.72 No 20 0.85 Yes -46 0.71 Yes 24 78.56 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 74230127 - NM_001402 EEF1A1 1 0 0.11 7 5.67 81.83 36 5.92 Yes 23 -0.02 No 0 0 No -26 0.35 No 44 37.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 21313387 - NM_174928 EEF1AKMT1 1 0.45 0.1 7 -4.49 70.09 30 8.71 Yes 17 0.68 No 0 0 No -29 0.97 Yes 41 95.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 207025605 + NM_001959 EEF1B2 1 0.15 4.13 71 8.04 88.88 22 5.2 No 9 1.11 Yes 26 0.85 Yes -21 0.85 Yes 49 85.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 207025610 + NM_001959 EEF1B2 1 0.11 2.97 67 2.11 0 27 5.66 Yes 14 1.08 Yes 26 0.85 Yes -26 0.86 Yes 44 80.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 207026077 + NM_001959 EEF1B2 1 0.01 0.22 11 1.27 0 12 4.12 No 72 0.31 No 0 0 No -38 0.45 No 35 62.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 207027461 + NM_001959 EEF1B2 1 0.01 0.17 11 -2.61 0 12 4.24 No 26 1.28 Yes 0 0 No -38 0.9 Yes 32 93.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144661995 - NM_001317743 EEF1D 1 0.15 1.49 54 1.95 0 9 3.87 No 19 2.64 Yes 25 0.96 Yes -31 0.93 Yes 39 91.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144662803 - NM_001317743 EEF1D 1 0.33 5.26 71 4.02 74.04 32 3.75 No 1 0.69 No 26 0.85 Yes -19 0.57 No 27 77.36 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 144662876 - NM_001317743 EEF1D 1 0.02 0.31 16 0.15 63.89 11 5.57 Yes 42 1.01 Yes 0 0 No -54 0.6 No 16 66.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 144662928 - NM_001317743 EEF1D 1 0.01 0.14 8 0.49 71.33 34 6 Yes 50 -4.24 No 19 0.95 Yes -29 0.62 No 41 73.31 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 144663317 - NM_001317743 EEF1D 1 0.06 0.53 31 -0.93 0 11 4.12 No 20 2.02 Yes 0 0 No -32 0.93 Yes 38 91.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144665447 - NM_001317743 EEF1D 1 0.09 0.15 8 7.99 88.7 28 6.48 Yes 15 0.35 No 0 0 No -23 0.88 Yes 47 91.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 144668461 - NM_001317743 EEF1D 1 836.09 1427.57 72 9.04 86.54 35 5.92 Yes 69 0.51 No 26 0.37 Yes -26 0.41 No 44 26.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 144668487 - NM_001317743 EEF1D 1 0.13 0.21 13 -2.26 48.11 31 5.75 Yes 43 0.51 No 26 0.37 Yes -30 0.8 Yes 40 81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144669023 - NM_001317743 EEF1D 1 600.87 1353.61 72 9.03 85.84 24 6.32 Yes 11 2.18 Yes 23 0.94 Yes -23 0.8 Yes 47 93.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144672252 - NM_001317743 EEF1D 1 6.96 15.69 72 3.61 67.28 41 8.77 Yes 5 -0.62 No 41 0.47 Yes -41 0.73 Yes 29 89.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144672906 - NM_001317743 EEF1D 1 0.26 0.58 28 3.45 85.51 24 7.42 Yes 11 1.3 Yes 20 0.79 Yes -23 0.94 Yes 47 93.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144672909 - NM_001317743 EEF1D 1 3.94 9.01 71 6.81 85.4 21 7.21 Yes 8 1.33 Yes 20 0.79 Yes -20 0.92 Yes 50 93.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144674831 - NM_001317743 EEF1D 1 0.44 1.1 43 8.47 78.38 32 7.62 Yes 19 2.41 Yes 31 0.95 Yes -31 0.94 Yes 39 96.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144674968 - NM_001317743 EEF1D 1 0.04 0.1 7 5.95 80.92 19 5 No 6 1.4 Yes 18 0.71 Yes -18 0.82 Yes 52 92.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144675064 - NM_001317743 EEF1D 1 0.36 0.82 34 3.77 0 17 4.21 No 10 0.64 No 28 0.86 Yes -22 0.59 No 48 72.46 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 144675113 - NM_001317743 EEF1D 1 0.12 0.29 16 9.53 91.11 28 5.48 No 69 0.51 No 27 0.92 Yes -27 0.94 Yes 43 91.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144676242 - NM_001317743 EEF1D 1 1.39 3.11 67 11.05 83.95 26 5.66 Yes NA NA NA 25 0.68 Yes -25 0.67 Yes 46 73.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144676689 - NM_001317743 EEF1D 1 0.59 1.4 47 3.17 84.95 22 4.9 No 52 -0.89 No 21 0.54 Yes -24 0.62 No 49 41.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 144677063 - NM_001317743 EEF1D 1 0.12 0.26 12 4.93 85.74 20 4.77 No -1 0.52 No 0 0 No -23 0.65 No 51 27.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 144679151 - NM_001317743 EEF1D 1 0.79 1.82 58 8.92 87.07 22 5.29 No 56 0.86 Yes 0 0 No -25 0.66 Yes 49 82.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144679245 - NM_001317743 EEF1D 1 0.18 0.43 26 -0.99 60.88 24 6.4 Yes 11 -0.21 No 0 0 No -23 0.97 Yes 47 92.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 8095729 - NR_037618 EEF1E1-BLOC1S5 1 0.56 1.1 45 10.64 98.64 49 8.72 Yes 36 1.95 Yes 26 0.03 Yes -48 0.81 Yes 22 85.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 8102174 - NR_037618 EEF1E1-BLOC1S5 1 0.68 1.69 51 4.92 89.73 23 5 No 10 0.48 No 0 0 No -22 0.95 Yes 48 93.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62327300 - NM_001404 EEF1G 1 0.05 1.57 60 -5.8 0 19 4.36 No 24 0.63 No 0 0 No -36 0.58 No 34 68.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62328334 - NM_001404 EEF1G 1 0.03 0.5 26 8.56 86.27 16 4.69 No 10 1.2 Yes 0 0 No -22 0.93 Yes 48 87.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62334977 - NM_001404 EEF1G 1 0.02 1.47 49 5.79 93.06 20 4.9 No 41 2.08 Yes 0 0 No -19 0.49 No 17 63.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 62339095 - NM_001404 EEF1G 1 0 0.17 10 -35.96 0 16 4.69 No 71 2.2 Yes 0 0 No -6 0.33 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 62339386 - NM_001404 EEF1G 1 0 0.17 11 0.98 0 18 6.31 Yes 5 0.38 No 0 0 No -36 0.53 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62340411 - NM_001404 EEF1G 1 0 0.13 7 0.26 83.66 20 3.58 No 57 -3.7 No 0 0 No -19 0.8 Yes 51 73.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3976770 - NM_001961 EEF2 1 0.05 2.25 63 4.1 72.32 43 6.86 Yes 30 1.68 Yes 22 0.86 Yes -42 0.8 Yes 28 94.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 3977654 - NM_001961 EEF2 1 0 0.14 8 -13.58 0 12 4.04 No 63 -3.26 No 0 0 No -24 0.19 No 47 24.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 3978006 - NM_001961 EEF2 1 0.04 1.49 54 2.52 83.63 24 4.9 No 54 -0.74 No 0 0 No -23 0.61 No 48 25.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 3978102 - NM_001961 EEF2 1 0.05 1.94 56 4.4 72.49 30 5.73 Yes 50 1.61 Yes 0 0 No -29 0.7 Yes 44 34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 3978201 - NM_001961 EEF2 1 0.01 0.42 23 6.44 92.21 15 4.95 No 2 0.85 Yes 25 0.48 Yes -20 0.71 Yes 50 60.96 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 3978395 - NM_001961 EEF2 1 0 0.18 12 -0.57 59.92 20 6.9 Yes 8 -1.89 No 0 0 No -19 0.66 No 51 74.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 3979512 - NM_001961 EEF2 1 0.02 0.82 34 4.08 56.55 27 6.78 Yes 14 1.01 Yes 0 0 No -26 0.78 Yes 44 71.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3980116 - NM_001961 EEF2 1 0.02 0.67 26 8.6 87.75 15 4.76 No 72 -4.25 No 0 0 No -28 0.42 No 47 36.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 3980216 - NM_001961 EEF2 1 0.01 0.29 15 3.46 84.01 21 4.9 No 8 0.3 No 0 0 No -20 0.91 Yes 50 80.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3980285 - NM_001961 EEF2 1 0.01 0.25 15 7.75 77.74 21 6.48 Yes 8 1.18 Yes 0 0 No -20 0.8 Yes 50 88.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3980707 - NM_001961 EEF2 1 0 0.24 15 -2.64 0 30 5.92 Yes 17 0.02 No 0 0 No -28 0.44 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 3982037 - NM_001961 EEF2 1 0 0.17 12 0.09 75.45 17 4.8 No 32 1.39 Yes 0 0 No -44 0.61 No 26 75.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 3982050 - NM_001961 EEF2 1 0 0.1 7 -4.4 0 32 6.71 Yes 19 1.39 Yes 0 0 No -31 0.61 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 22231950 + NM_013302 EEF2K 1 0.31 0.14 8 8.29 83.94 21 7.21 Yes 8 1.24 Yes 0 0 No -20 0.85 Yes 50 92.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 22240340 + NM_013302 EEF2K 1 1.05 0.82 31 2.68 68.39 55 9.2 Yes 68 1.9 Yes 0 0 No -54 0.49 No 16 68.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 22241861 + NM_013302 EEF2K 1 0.3 0.24 13 9.57 85.79 32 6.16 Yes 76 0.8 Yes 0 0 No -31 0.81 Yes 39 83.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 22247308 + NM_013302 EEF2K 1 0.14 0.13 8 9.38 88.27 25 7.47 Yes 12 1.38 Yes 0 0 No -24 0.93 Yes 46 94.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 22271668 + NM_013302 EEF2K 1 0.14 0.11 8 9.63 77.99 38 5.52 No 25 1.47 Yes 0 0 No -37 0.44 No 33 75.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 22274384 + NM_013302 EEF2K 1 0.37 0.25 17 6.85 82.16 12 4.56 No -1 0.24 No 0 0 No -21 0.76 Yes 49 67.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 22279524 + NM_013302 EEF2K 1 0.3 0.21 14 2.46 0 39 6.61 Yes 42 0.65 No 0 0 No -30 0.62 No 32 60.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 22284007 + NM_013302 EEF2K 1 0.2 0.13 9 3.61 84.41 37 9.64 Yes 52 0.64 No 0 0 No -30 0.55 No 40 53.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 22284027 + NM_013302 EEF2K 1 0.17 0.11 8 7.79 89.33 23 5.39 No 72 0.64 No 0 0 No -22 0.63 No 20 52.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 22289604 + NM_013302 EEF2K 1 0.45 0.24 12 5.95 79.25 28 7.39 Yes 31 1.23 Yes 0 0 No -28 0.57 No 43 76.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 22293773 + NM_013302 EEF2K 1 1.83 1.07 43 7.92 87.88 27 5.11 No 19 0.66 No 0 0 No -26 0.76 Yes 44 74.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 5141940 - NM_201400 EEF2KMT 1 0.64 0.32 19 7.88 82.32 19 5.64 Yes 71 -2.53 No 24 0.56 Yes -18 0.54 No 52 67.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 5147351 - NM_201400 EEF2KMT 1 0.48 0.19 10 -2.05 0 31 6.09 Yes 18 0.39 No 0 0 No -24 0.57 No 40 78.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 5147355 - NM_201400 EEF2KMT 1 3.76 1.46 45 3.74 76.32 27 5.79 Yes 14 0.4 No 26 0.9 Yes -26 0.64 No 44 76.62 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 127991050 + NM_021937 EEFSEC 1 0.22 0.15 8 4.93 69.43 38 6.46 Yes 53 0.43 No 0 0 No -35 0.64 No 35 70.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 128001316 + NM_021937 EEFSEC 1 2.25 1.53 48 9.52 98.09 27 6.07 Yes 61 0.06 No 0 0 No -26 0.75 Yes 44 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 128055746 + NM_021937 EEFSEC 1 0.14 0.1 7 4.84 79.82 37 7.61 Yes 24 1.18 Yes 36 0.53 Yes -36 0.77 Yes 34 77.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 128059828 + NM_021937 EEFSEC 1 0.2 0.14 10 8.98 85.9 20 6.63 Yes 7 1.5 Yes 0 0 No -22 0.63 No 48 77.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 128086520 + NM_021937 EEFSEC 1 4.42 2.13 57 10.06 90.6 23 6.67 Yes 10 0.69 No 0 0 No -22 0.72 Yes 48 78.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 90393254 - NM_001284266 EFCAB11 1 12.32 0.79 36 8.58 82.39 20 7.05 Yes 28 1.46 Yes 0 0 No -26 0.54 No 44 60.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 90396024 - NM_001284266 EFCAB11 1 8.33 0.39 21 1.87 77.23 90 9.91 Yes 51 0.37 No 0 0 No -36 0.36 No 26 77.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 90416483 - NM_001284266 EFCAB11 1 1.04 0.24 13 3.35 0 36 5.71 Yes 23 0.49 No 29 0.62 Yes -33 0.63 No 37 84.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 45406158 + NM_152347 EFCAB13 1 0.97 0.17 10 11.14 85.18 21 5.27 No 27 0.42 No 28 0.88 Yes -28 0.81 Yes 42 82.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45412625 + NM_152347 EFCAB13 1 5.14 0.88 35 5.27 82.63 37 4.34 No 0 1.49 Yes 0 0 No -27 0.82 Yes 43 89.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45418756 + NM_152347 EFCAB13 1 1.03 0.19 10 4.16 83.32 34 6.24 Yes 34 0.66 No 33 0.75 Yes -33 0.59 No 37 80.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 45418163 + NM_152347 EFCAB13 1 1.27 0.11 7 8.95 85.86 33 8 Yes 20 1.81 Yes 0 0 No -32 0.92 Yes 38 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45418756 + NM_152347 EFCAB13 1 11.37 1.58 50 4.16 83.32 34 6.24 Yes 34 0.66 No 33 0.75 Yes -33 0.59 No 37 80.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 45418906 + NM_152347 EFCAB13 1 0.92 0.13 8 4.67 78.68 33 7.03 Yes 20 0.16 No 0 0 No -32 0.61 No 38 75.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 45422196 + NM_152347 EFCAB13 1 3.09 0.61 34 4.47 82.53 16 5.29 No 3 0.29 No 0 0 No -26 0.67 Yes 44 74.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 45466588 + NM_152347 EFCAB13 1 3.49 0.32 15 5.5 77.98 25 5.98 Yes 12 0.87 Yes 0 0 No -24 0.89 Yes 46 95.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45466588 + NM_152347 EFCAB13 1 7.27 0.74 36 5.5 77.98 25 5.98 Yes 12 0.87 Yes 0 0 No -24 0.89 Yes 46 95.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45474434 + NM_152347 EFCAB13 1 8.61 0.53 26 -6.34 0 15 3.87 No 51 2.15 Yes 0 0 No -64 0.34 No 56 14.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 45474496 + NM_152347 EFCAB13 1 3.28 0.18 10 3.69 84.22 35 8.1 Yes 3 1.45 Yes 0 0 No -34 0.81 Yes 36 89.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45479500 + NM_152347 EFCAB13 1 3.92 0.13 9 2.2 83.35 23 5.19 No 10 0.26 No 0 0 No -22 0.64 No 44 69.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 45481930 + NM_152347 EFCAB13 1 0.74 0.15 10 1.54 76.47 25 6.93 Yes 12 0.48 No 0 0 No -24 0.83 Yes 46 89.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 45485481 + NM_152347 EFCAB13 1 1.36 0.24 11 10.26 81.37 26 6.05 Yes 13 1 Yes 0 0 No -25 0.85 Yes 45 85.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45490115 + NM_152347 EFCAB13 1 1.22 0.21 13 4.77 65.82 29 5.39 No 10 0.32 No 27 0.43 Yes -35 0.56 No 35 77.84 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 47145811 - NM_014774 EFCAB14 1 0.33 0.76 36 5.46 85.67 23 5.37 No 18 1.91 Yes 0 0 No -30 0.64 No 40 53.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 47150274 - NM_014774 EFCAB14 1 0.04 0.1 7 -16.12 0 19 6.25 Yes 6 0.69 No 24 0.35 Yes -29 0.38 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 47150818 - NM_014774 EFCAB14 1 1.47 3.51 68 9.27 83.92 27 5.57 Yes 53 -3.74 No 27 0.69 Yes -24 0.87 Yes 46 90.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 47151885 - NM_014774 EFCAB14 1 0.05 0.14 9 10.34 84.45 34 7.07 Yes 21 1.67 Yes 0 0 No -33 0.91 Yes 37 92.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 47157864 - NM_014774 EFCAB14 1 0.1 0.25 13 4.12 64.35 27 6.82 Yes 14 1.34 Yes 0 0 No -26 0.96 Yes 44 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 47171037 - NM_014774 EFCAB14 1 0.32 0.92 41 6.99 84.12 13 5 No 60 -4.42 No 0 0 No -27 0.74 Yes 43 81.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 47171375 - NM_014774 EFCAB14 1 0.1 0.26 14 8.07 86.79 24 5.55 No 11 0.28 No 0 0 No -28 0.39 No 42 65.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 47180295 - NM_014774 EFCAB14 1 0.06 0.17 10 2.45 71.52 22 6.73 Yes 9 1.22 Yes 0 0 No -21 0.7 Yes 49 76.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 47182119 - NM_014774 EFCAB14 1 0.37 0.72 37 -3.51 78.33 24 5.48 No 11 0.75 No 26 0.94 Yes -23 0.87 Yes 47 92.13 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 245185470 + NM_001143943 EFCAB2 1 7.76 0.75 33 10.95 95.65 30 5.48 No 32 1.13 Yes 0 0 No -27 0.45 No 45 75.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 245238875 + NM_001143943 EFCAB2 1 0.92 0.18 8 8.47 96.33 27 6.11 Yes 14 0.89 Yes 26 0.81 Yes -22 0.71 Yes 48 73.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 63997000 + NM_032437 EFCAB7 1 0.51 0.19 11 9.29 91 17 5.82 Yes 75 1.28 Yes 0 0 No -26 0.7 Yes 44 73.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 64000314 + NM_032437 EFCAB7 1 2.44 0.6 31 11.23 85.75 29 4.88 No 16 1.4 Yes 0 0 No -28 0.6 No 42 66.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 64018486 + NM_032437 EFCAB7 1 0.32 0.1 7 4.82 0 17 4.31 No 38 0.89 Yes 0 0 No -19 0.8 Yes 51 90.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 64018854 + NM_032437 EFCAB7 1 2.04 0.6 32 9.76 85.92 28 6.69 Yes 51 0.22 No 0 0 No -30 0.55 No 40 69.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 64021023 + NM_032437 EFCAB7 1 1.11 0.31 17 0.61 79.97 28 6.21 Yes 15 1.39 Yes 32 0.75 Yes -27 0.84 Yes 43 87.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 64036695 + NM_032437 EFCAB7 1 1.31 0.43 21 0.07 0 25 5.58 Yes 57 0.76 No 0 0 No -24 0.87 Yes 46 88.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 52288484 + NM_018100 EFHC1 1 2.08 0.26 16 11.23 85.86 31 6.48 Yes 18 1.67 Yes 0 0 No -30 0.89 Yes 40 95.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52335827 + NM_018100 EFHC1 1 0.84 0.13 8 3.49 73.02 42 6.93 Yes 29 0.45 No 0 0 No -41 0.47 No 29 81.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 52343889 + NM_018100 EFHC1 1 2.18 0.35 19 10.22 81.37 10 5.66 Yes -3 0.85 Yes 0 0 No -25 0.84 Yes 45 73.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52346343 + NM_018100 EFHC1 1 2.91 0.24 15 13.72 90.57 43 7.65 Yes 30 1.33 Yes 0 0 No -45 0.9 Yes 25 91.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52347581 + NM_018100 EFHC1 1 1.88 0.13 9 7.96 80.09 42 6.96 Yes 76 0.69 No 0 0 No -27 0.72 Yes 43 45.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 52353354 + NM_018100 EFHC1 1 1.37 0.19 11 6.05 80.4 29 7.14 Yes 59 1.32 Yes 28 0.59 Yes -29 0.58 No 47 58.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 15753666 + NM_024329 EFHD2 1 0.11 0.14 7 3.4 77.11 13 5.48 No 37 1.53 Yes 0 0 No -23 0.78 Yes 21 55.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 15754317 + NM_024329 EFHD2 1 0.04 0.11 7 5.79 76.78 37 6.56 Yes 61 -0.09 No 0 0 No -30 0.55 No 34 68.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 82435961 - NM_001322845 EFL1 1 0.57 0.18 10 8.35 81.09 31 5.63 Yes 37 1.2 Yes 0 0 No -31 0.7 Yes 39 57.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 82487082 - NM_001322845 EFL1 1 0.42 0.29 19 8.42 78.03 28 5.38 No 37 2.02 Yes 0 0 No -27 0.31 No 47 41.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 82508010 - NM_001322845 EFL1 1 1.19 0.46 21 9.52 81.24 23 5.38 No 34 1.12 Yes 27 0.85 Yes -22 0.86 Yes 48 89.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 82512706 - NM_001322845 EFL1 1 1.26 0.44 25 8.19 91.08 25 5.39 No 12 1.07 Yes 0 0 No -24 0.92 Yes 46 92.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 82519921 - NM_001322845 EFL1 1 0.29 0.21 13 4.23 68.93 16 4.69 No 42 0.67 No 22 0.51 Yes -24 0.64 No 63 46.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 82544890 - NM_001322845 EFL1 1 1.08 0.69 32 4.19 80.54 48 7.85 Yes 48 0.84 Yes 0 0 No -31 0.53 No 39 58.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155036917 + NM_005227 EFNA4 1 4.8 0.6 31 10.85 90.51 61 7.68 Yes 74 2.87 Yes 0 0 No -24 0.8 Yes 46 72.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155041494 + NM_005227 EFNA4 1 28.91 2.54 59 7.88 77.33 26 5.25 No 44 1.43 Yes 26 0.59 Yes -25 0.43 No 45 60.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 133000936 + NM_001323557 EFR3A 1 2.62 4.14 71 4.75 69.01 43 7.44 Yes 57 -3.45 No 0 0 No -26 0.42 No 35 37.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 133008634 + NM_001323557 EFR3A 1 0.16 0.29 14 -7.26 50.79 9 4.73 No 72 0.79 Yes 26 0.36 Yes -40 0.2 No 41 15.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 133013015 + NM_001323557 EFR3A 1 0.25 0.47 27 5.5 67.44 29 6.31 Yes 16 0.98 Yes 29 0.73 Yes -28 0.57 No 47 61.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 42931402 - NM_001258353 EFTUD2 1 0.06 0.13 8 2.15 77.48 31 6.37 Yes 18 1.39 Yes 0 0 No -30 0.68 Yes 40 78.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42937366 - NM_001258353 EFTUD2 1 0.07 0.25 15 1.75 72.58 28 5.29 No 75 1.33 Yes 0 0 No -21 0.65 No 43 58.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 42945848 - NM_001258353 EFTUD2 1 0.06 0.15 10 5.71 77.35 28 5.83 Yes 15 1.11 Yes 27 0.9 Yes -27 0.91 Yes 43 95.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42949876 - NM_001258353 EFTUD2 1 0.04 0.14 9 4.58 86.19 50 6.31 Yes 4 1.68 Yes 0 0 No -38 0.49 No 32 55.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 42958011 - NM_001258353 EFTUD2 1 0.06 0.15 10 -5.63 78.1 24 6.16 Yes 11 1.43 Yes 21 0.85 Yes -23 0.93 Yes 47 95.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42960497 - NM_001258353 EFTUD2 1 0.51 1.78 61 3.53 76.48 33 6.24 Yes 37 1.68 Yes 32 0.46 Yes -30 0.33 No 21 45.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 62942435 + NM_001142615 EHBP1 1 2.69 1.63 51 9.11 91.84 21 5.66 Yes 8 1.06 Yes 0 0 No -20 0.68 Yes 50 87.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 63017853 + NM_001142615 EHBP1 1 1 0.69 33 9.05 85.46 36 6.62 Yes 8 1.03 Yes 0 0 No -35 0.79 Yes 35 67.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 63032842 + NM_001142615 EHBP1 1 0.41 0.22 13 1.4 0 32 5.6 Yes 15 1.47 Yes 0 0 No -27 0.71 Yes 43 77.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 63054988 + NM_001142615 EHBP1 1 0.19 0.11 7 3.07 79.69 21 7.21 Yes 8 1.01 Yes 0 0 No -20 0.86 Yes 50 90.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 63058120 + NM_001142615 EHBP1 1 0.18 0.13 8 5.78 68.55 13 5.23 No 0 1.92 Yes 30 0.52 Yes -32 0.73 Yes 38 67.28 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 63085540 + NM_001142615 EHBP1 1 2.46 1.51 47 8.72 90.21 73 7.98 Yes 28 1.5 Yes 35 0.69 Yes -30 0.57 No 40 78.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 63140088 + NM_001142615 EHBP1 1 0.59 0.29 17 6.38 89.97 21 6.07 Yes 8 1.64 Yes 0 0 No -20 0.62 No 50 39.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 63160393 + NM_001142615 EHBP1 1 0.52 0.32 19 10.53 97.39 24 6 Yes 11 1.81 Yes 0 0 No -23 0.86 Yes 47 93.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 63206325 + NM_001142615 EHBP1 1 4.46 1.88 50 3.59 78.45 31 5.32 No 26 -2.79 No 27 0.82 Yes -30 0.58 No 40 77.71 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 63215065 + NM_001142615 EHBP1 1 194.72 30.75 72 8.5 83.79 26 8.44 Yes 13 1.5 Yes 25 0.89 Yes -25 0.76 Yes 45 92.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 63248778 + NM_001142615 EHBP1 1 0.27 0.14 9 6.47 88.07 29 6.38 Yes 38 1.71 Yes 0 0 No -28 0.79 Yes 42 84.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65345677 + NM_001099409 EHBP1L1 1 0.21 0.14 10 9.4 89.86 13 5.48 No 0 1.32 Yes 0 0 No -24 0.58 No 46 82.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 65346552 + NM_001099409 EHBP1L1 1 0.59 0.43 26 4.2 0 51 7.07 Yes 38 2.07 Yes 0 0 No -34 0.68 Yes 27 83.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65346797 + NM_001099409 EHBP1L1 1 0.11 0.1 7 -11.29 0 10 4 No 47 -4.3 No 20 0.65 Yes -19 0.33 No 61 31.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 65348398 + NM_001099409 EHBP1L1 1 0.39 0.35 17 10 92.4 52 7.6 Yes 39 0.62 No 0 0 No -28 0.49 No 19 54.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65348660 + NM_001099409 EHBP1L1 1 0.15 0.18 12 -3.71 0 10 4 No 48 -3.84 No 25 0.69 Yes -18 0.45 No 52 51.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 65351390 + NM_001099409 EHBP1L1 1 0.58 0.21 13 10.97 87.88 18 5.07 No 5 1.47 Yes 0 0 No -30 0.69 Yes 53 64.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 65359430 + NM_001099409 EHBP1L1 1 3.51 2.83 61 0.86 68.2 9 6.08 Yes -4 1.39 Yes 30 0.31 Yes -8 0.33 No 62 63.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 64636486 - NM_006795 EHD1 1 0.05 0.13 8 8.06 80.74 32 5.11 No 2 0.4 No 0 0 No -25 0.31 No 45 42.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64639244 - NM_006795 EHD1 1 0.16 0.42 19 11.95 90.55 47 7.28 Yes 45 -1.15 No 0 0 No -37 0.61 No 24 67.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64644784 - NM_006795 EHD1 1 0.09 0.29 18 6.4 84.06 26 6.02 Yes 54 1.35 Yes 0 0 No -25 0.71 Yes 45 54.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 64645324 - NM_006795 EHD1 1 0.04 0.15 9 4.35 76.62 27 5.57 Yes 71 1.55 Yes 0 0 No -26 0.91 Yes 44 85.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42193374 - NM_139265 EHD4 1 0.05 0.11 8 -2.2 0 16 2.47 No 22 1.5 Yes 0 0 No -34 0.82 Yes 36 88.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140531953 + NM_024757 EHMT1 1 0.39 0.17 9 8.85 81.26 26 6.9 Yes 76 0.81 Yes 0 0 No -25 0.86 Yes 45 82.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140535721 + NM_024757 EHMT1 1 0.33 0.15 9 4.97 0 18 4.58 No 10 0.28 No 0 0 No -22 0.77 Yes 48 74.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140540787 + NM_024757 EHMT1 1 1.02 0.43 25 6.46 77.13 36 7.44 Yes 23 0.39 No 0 0 No -35 0.57 No 29 63.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140545311 + NM_024757 EHMT1 1 1.87 0.81 35 8.1 88.85 28 7.66 Yes 15 1.37 Yes 0 0 No -27 0.93 Yes 43 95.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140563520 + NM_024757 EHMT1 1 1.03 0.42 21 5.85 85.02 27 7.47 Yes 14 2.6 Yes 0 0 No -26 0.9 Yes 44 93.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140579728 + NM_024757 EHMT1 1 0.41 0.18 10 9.46 84.87 26 5.73 Yes 13 1.82 Yes 0 0 No -26 0.49 No 44 73.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140611079 + NM_024757 EHMT1 1 0.16 0.13 8 -6.12 73.14 25 5.91 Yes 12 1.55 Yes 0 0 No -24 0.91 Yes 46 95.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140614776 + NM_024757 EHMT1 1 0.15 0.18 11 6.95 84.59 27 6.78 Yes 36 0.69 No 0 0 No -27 0.6 No 41 49.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140621618 + NM_024757 EHMT1 1 0.46 0.54 29 8.25 87.82 25 8.6 Yes 60 1.65 Yes 0 0 No -24 0.74 Yes 46 80.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140622776 + NM_024757 EHMT1 1 0.12 0.14 8 -1.07 0 13 3.87 No 11 1.53 Yes 28 0.65 Yes -12 0.5 No 43 72.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 140622807 + NM_024757 EHMT1 1 0.12 0.14 9 -1.85 0 11 4 No 42 1.53 Yes 0 0 No -25 0.62 No 45 69.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140624274 + NM_024757 EHMT1 1 0.22 0.13 9 1.44 67.81 38 8.89 Yes 25 1.36 Yes 0 0 No -37 0.66 No 33 92.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140637843 + NM_024757 EHMT1 1 56 34.78 72 8.02 80.37 24 5.48 No 29 1.62 Yes 23 0.86 Yes -23 0.54 No 29 83.84 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 140637846 + NM_024757 EHMT1 1 3.71 2.26 62 7.17 91.63 27 5.74 Yes 32 1.62 Yes 0 0 No -26 0.76 Yes 26 78.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140639924 + NM_024757 EHMT1 1 1.73 1.79 49 3.35 76.2 31 5.5 No 18 0.19 No 27 0.52 Yes -27 0.5 No 43 55.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 140639927 + NM_024757 EHMT1 1 0.23 0.19 12 -2.12 61.13 34 5.76 Yes 21 0.19 No 0 0 No -30 0.5 No 40 54.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140676559 + NM_024757 EHMT1 1 0.3 0.51 29 8.97 85.96 31 5.74 Yes 18 1.16 Yes 0 0 No -30 0.92 Yes 40 93.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140677211 + NM_024757 EHMT1 1 0.19 0.33 19 7.71 78.51 22 6.16 Yes 9 1.59 Yes 0 0 No -21 0.94 Yes 49 90.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140678557 + NM_024757 EHMT1 1 4.44 7.56 71 4.9 89.69 26 5.1 No 63 0.22 No 28 0.58 Yes -28 0.55 No 42 63.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 140686506 + NM_024757 EHMT1 1 2.45 5.26 70 9.34 95.65 20 4.9 No 7 2.03 Yes 19 0.96 Yes -19 0.92 Yes 51 95.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140689531 + NM_024757 EHMT1 1 0.92 1.86 56 5.68 75.55 26 5.02 No 13 0.74 No 0 0 No -18 0.35 No 52 59.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140694830 + NM_024757 EHMT1 1 0.11 0.24 14 11.07 80.15 24 7.07 Yes 73 0.28 No 0 0 No -23 0.46 No 47 64.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140696860 + NM_024757 EHMT1 1 1.28 1.57 56 7.59 85.43 25 5.2 No 72 0.5 No 24 0.72 Yes -24 0.59 No 46 84.4 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 140697308 + NM_024757 EHMT1 1 5.72 6.93 71 5.19 64.19 29 5.48 No 46 0.52 No 28 0.72 Yes -28 0.63 No 42 74.39 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 140697695 + NM_024757 EHMT1 1 0.11 0.13 8 7.68 76.1 69 5.74 Yes 11 1.01 Yes 23 0.89 Yes -28 0.64 No 42 68.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 140703596 + NM_024757 EHMT1 1 0.17 0.18 12 1.14 0 21 4.47 No 15 0.15 No 0 0 No -19 0.8 Yes 49 44.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 140707480 + NM_024757 EHMT1 1 1.14 1.32 53 7.71 79.4 26 5.66 Yes 27 1.15 Yes 0 0 No -25 0.53 No 45 75.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140708702 + NM_024757 EHMT1 1 0.11 0.15 11 6.05 86.38 22 4.69 No 9 0.6 No 0 0 No -21 0.96 Yes 49 90.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140711846 + NM_024757 EHMT1 1 0.41 0.57 28 3.31 78.9 17 6.16 Yes 4 0.86 Yes 0 0 No -31 0.4 No 39 50.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 125439737 + NM_001330419 EI24 1 0.69 0.1 7 6.58 75.9 20 6.28 Yes 7 0.84 Yes 21 0.6 Yes -19 0.69 Yes 51 59.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 125445146 + NM_001330419 EI24 1 1.5 4.22 70 -1.24 55.74 20 4.84 No 32 0.2 No 0 0 No -24 0.49 No 46 56.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 125445168 + NM_001330419 EI24 1 0.08 0.22 13 -7.58 0 15 4.36 No 14 0.44 No 0 0 No -29 0.51 No 41 33.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 125445200 + NM_001330419 EI24 1 2.56 7.24 72 4.65 66.76 37 6.37 Yes 46 0.45 No 0 0 No -27 0.79 Yes 43 87.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 125445204 + NM_001330419 EI24 1 0.18 0.46 26 0.87 0 41 6.67 Yes 50 0.45 No 0 0 No -31 0.77 Yes 39 80.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 125445698 + NM_001330419 EI24 1 0.4 1.42 45 2.89 84.41 32 6.93 Yes 47 0.25 No 31 0.69 Yes -23 0.37 No 47 53.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 125445779 + NM_001330419 EI24 1 0.03 0.11 8 6.11 88.68 22 4.8 No 9 0.47 No 0 0 No -21 0.95 Yes 49 93.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 125447404 + NM_001330419 EI24 1 0.06 0.25 16 2.61 0 35 7.35 Yes 22 1.26 Yes 0 0 No -34 0.93 Yes 36 91.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 125447631 + NM_001330419 EI24 1 0.17 0.57 29 5.41 81.02 65 8.27 Yes 52 1.39 Yes 27 0.65 Yes -27 0.61 No 33 34.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 125450030 + NM_001330419 EI24 1 0.02 0.1 7 4.64 77.14 31 6.08 Yes 18 0.74 No 0 0 No -30 0.84 Yes 40 89.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 125453090 + NM_001330419 EI24 1 0.1 0.44 24 6.03 85.4 22 6.11 Yes 9 1.07 Yes 0 0 No -21 0.93 Yes 49 89.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 39846000 + NM_005801 EIF1 1 0.02 0.61 28 7.28 84.21 12 5.39 No 66 1.27 Yes 24 0.95 Yes -22 0.77 Yes 48 74.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 39846310 + NM_005801 EIF1 1 0 0.17 7 7.72 78.48 26 5.69 Yes 1 1.22 Yes 24 0.92 Yes -25 0.54 No 45 75.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 39846342 + NM_005801 EIF1 1 0.1 3.15 66 -1.45 65.89 28 6.4 Yes 15 1.56 Yes 0 0 No -27 0.89 Yes 43 93.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65767625 - NM_001242486 EIF1AD 1 0.5 0.43 22 -3.05 0 15 4.12 No 19 1.44 Yes 0 0 No -31 0.55 No 30 69.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 20143462 - NM_001412 EIF1AX 1 0.09 0.21 11 10.6 90.81 44 9.68 Yes 31 2.03 Yes 0 0 No -27 0.68 Yes 43 48.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 40352428 + NM_005875 EIF1B 1 0.28 0.64 30 7.25 89.51 19 5.01 No 6 0.97 Yes 0 0 No -24 0.72 Yes 46 77.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 40353446 + NM_005875 EIF1B 1 0.03 0.11 8 2.86 73.4 22 5.1 No 60 1.13 Yes 20 0.9 Yes -21 0.58 No 29 65.21 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 150275371 + NM_032025 EIF2A 1 0.06 0.15 9 4.15 73.6 20 7.06 Yes 7 1.03 Yes 19 0.64 Yes -19 0.75 Yes 51 86.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 150280330 + NM_032025 EIF2A 1 0.04 0.19 12 -12.1 66.71 25 6.55 Yes 12 0.77 No 29 0.75 Yes -31 0.7 Yes 39 79.66 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 150281287 + NM_032025 EIF2A 1 0.05 0.28 17 -6.7 57.44 24 5.15 No 28 0.65 No 22 0.88 Yes -21 0.24 No 49 13.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 150282910 + NM_032025 EIF2A 1 0.25 0.76 41 8.84 77.09 38 4.67 No 2 0.95 Yes 0 0 No -25 0.56 No 45 53.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 150282977 + NM_032025 EIF2A 1 0.46 1.49 55 2.08 60.71 32 7.47 Yes 69 0.91 Yes 31 0.9 Yes -31 0.55 No 39 51.96 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 150283198 + NM_032025 EIF2A 1 0.09 0.32 17 11.03 87.26 36 7.57 Yes 1 1.55 Yes 0 0 No -35 0.89 Yes 35 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 150285481 + NM_032025 EIF2A 1 0.08 0.25 18 -9.43 0 26 6.32 Yes 13 0.81 Yes 0 0 No -25 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 150285707 + NM_032025 EIF2A 1 0.11 0.33 19 7.62 90.37 22 5.29 No 58 0.56 No 0 0 No -21 0.69 Yes 49 73.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 150285947 + NM_032025 EIF2A 1 0.02 0.1 7 2.83 62.47 44 6.65 Yes 31 0.1 No 22 0.94 Yes -32 0.58 No 38 64.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 150293386 + NM_032025 EIF2A 1 0.07 0.36 20 8.86 86.32 15 5.38 No 64 0.64 No 0 0 No -28 0.52 No 43 63.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 150299408 + NM_032025 EIF2A 1 0.04 0.18 12 -5.48 0 65 7.96 Yes 38 1.27 Yes 0 0 No -28 0.51 No 42 43.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6066589 - NM_001134335 EIF2AK1 1 0.53 0.93 36 5.2 0 30 5.39 No 36 1.85 Yes 0 0 No -29 0.77 Yes 41 74.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6078646 - NM_001134335 EIF2AK1 1 0.04 0.11 8 3.4 70.84 17 5.33 No 23 1.17 Yes 0 0 No -23 0.85 Yes 47 93.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6078667 - NM_001134335 EIF2AK1 1 0.29 0.72 35 6.78 77.73 15 5.53 No 2 1.22 Yes 0 0 No -26 0.52 No 40 57.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6078667 - NM_001134335 EIF2AK1 1 0.34 0.85 37 6.78 77.73 15 5.53 No 2 1.22 Yes 0 0 No -26 0.52 No 40 57.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6082625 - NM_001134335 EIF2AK1 1 756.53 195.97 72 7.17 91.34 23 5.67 Yes 56 1.17 Yes 28 0.65 Yes -22 0.7 Yes 48 56.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 6082625 - NM_001134335 EIF2AK1 1 0.6 0.14 10 7.17 91.34 23 5.67 Yes 56 1.17 Yes 28 0.65 Yes -22 0.7 Yes 48 56.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 6085991 - NM_001134335 EIF2AK1 1 0.19 0.4 21 6.09 85.12 35 6.56 Yes 5 1.99 Yes 0 0 No -34 0.57 No 36 79.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6086878 - NM_001134335 EIF2AK1 1 0.11 0.22 15 9.59 89.58 19 9.2 Yes 6 0.95 Yes 0 0 No -23 0.43 No 47 43.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6089625 - NM_001134335 EIF2AK1 1 0.23 0.47 27 9.67 82.36 36 6.68 Yes 68 0.89 Yes 0 0 No -35 0.75 Yes 35 66.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6094267 - NM_001134335 EIF2AK1 1 0.51 0.93 45 9.16 86.72 17 5.17 No 65 0.26 No 0 0 No -24 0.73 Yes 46 76.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6097874 - NM_001134335 EIF2AK1 1 0.14 0.26 15 9.44 95.65 27 6.09 Yes 14 1.29 Yes 26 0.92 Yes -26 0.93 Yes 44 95.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 37334509 - NM_001135651 EIF2AK2 1 0.03 0.13 7 -0.65 72.36 20 4.84 No 37 1.45 Yes 0 0 No -56 0.36 No 14 67.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 37334524 - NM_001135651 EIF2AK2 1 0.23 0.96 42 3.09 81.38 23 4.9 No 22 1.45 Yes 0 0 No -56 0.43 No 48 84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 37334537 - NM_001135651 EIF2AK2 1 0.02 0.11 8 -12.55 0 64 6.69 Yes 9 1.46 Yes 0 0 No -48 0.51 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 37334669 - NM_001135651 EIF2AK2 1 0.03 0.13 9 -21.68 0 30 7.2 Yes 17 1.33 Yes 0 0 No -29 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 37338283 - NM_001135651 EIF2AK2 1 1.61 5.25 70 11.86 86.51 29 5.81 Yes 33 0.9 Yes 0 0 No -28 0.6 No 42 61.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 37341981 - NM_001135651 EIF2AK2 1 0.07 0.24 13 -0.08 78.63 16 5.06 No 3 0.43 No 0 0 No -26 0.66 No 20 66.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37341984 - NM_001135651 EIF2AK2 1 0.11 0.44 21 -2.67 70.26 13 4.75 No 0 0.45 No 0 0 No -23 0.66 No 23 72.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 37349804 - NM_001135651 EIF2AK2 1 0.05 0.13 8 -2.52 0 37 7.55 Yes 24 1.72 Yes 0 0 No -36 0.88 Yes 34 94.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 37353535 - NM_001135651 EIF2AK2 1 0.1 0.28 17 1.11 69.4 23 4.35 No 29 0.61 No 0 0 No -23 0.45 No 29 65.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37363286 - NM_001135651 EIF2AK2 1 0.17 0.83 36 10.36 92.47 16 5.58 Yes 3 0.22 No 0 0 No -27 0.63 No 43 64.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37368465 - NM_001135651 EIF2AK2 1 0.04 0.13 9 4.69 88.49 15 5.18 No 2 1.08 Yes 0 0 No -28 0.39 No 42 56.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 37368841 - NM_001135651 EIF2AK2 1 0.13 0.53 27 3.01 0 29 5.65 Yes 71 0.6 No 0 0 No -28 0.81 Yes 42 86.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37374103 - NM_001135651 EIF2AK2 1 0.05 0.14 10 0.85 74.55 20 4.78 No 7 0.5 No 0 0 No -19 0.68 Yes 51 45.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 37376083 - NM_001135651 EIF2AK2 1 12.19 1.07 41 6.5 82.49 24 5.2 No 24 0.49 No 23 0.82 Yes -23 0.89 Yes 47 86.22 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 37376401 - NM_001135651 EIF2AK2 1 4.52 0.43 20 10.41 85.61 30 5.55 No 17 0.58 No 32 0.63 Yes -32 0.52 No 38 67.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 88861863 - NM_001313915 EIF2AK3 1 0.73 0.94 44 6.32 87.11 25 4.38 No 65 0.63 No 0 0 No -24 0.97 Yes 46 98.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 88874960 - NM_001313915 EIF2AK3 1 0.13 0.19 11 1.09 0 39 7.07 Yes 20 1.59 Yes 22 0.7 Yes -38 0.75 Yes 32 84.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 88882343 - NM_001313915 EIF2AK3 1 0.31 0.42 22 8.6 80.93 72 10.02 Yes 59 0.13 No 0 0 No -26 0.61 No 35 74.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 88888410 - NM_001313915 EIF2AK3 1 0.18 0.24 14 -7.17 0 17 4.35 No 72 0.57 No 0 0 No -16 0.32 No 39 43.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 88890147 - NM_001313915 EIF2AK3 1 0.1 0.17 10 2.1 71.4 89 5.34 No 76 1.18 Yes 26 0.82 Yes -25 0.45 No 45 55.94 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 88890527 - NM_001313915 EIF2AK3 1 4.89 6.68 71 5.65 80.01 19 6.21 Yes 55 0.82 Yes 0 0 No -34 0.63 No 36 49.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 88892633 - NM_001313915 EIF2AK3 1 0.23 0.29 15 3.89 84.17 27 5.2 No 57 0.91 Yes 0 0 No -26 0.82 Yes 44 79.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 88893515 - NM_001313915 EIF2AK3 1 0.3 0.4 23 4.8 75.28 35 4.68 No 22 0.06 No 0 0 No -21 0.83 Yes 49 76.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 88893627 - NM_001313915 EIF2AK3 1 4.73 6.86 72 11.94 91.23 24 5.29 No 38 0.6 No 32 0.39 Yes -18 0.55 No 47 66.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 40231327 + NM_001013703 EIF2AK4 1 0.23 0.17 8 10.48 93.18 24 5.68 Yes 58 2.32 Yes 0 0 No -23 0.64 No 37 67.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40237535 + NM_001013703 EIF2AK4 1 0.7 0.67 28 3.75 80.65 31 6.42 Yes 41 0.78 Yes 0 0 No -25 0.3 No 45 49.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40264116 + NM_001013703 EIF2AK4 1 0.27 0.29 16 8.25 79.38 12 5.83 Yes -1 1.65 Yes 0 0 No -30 0.69 Yes 40 67.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40268620 + NM_001013703 EIF2AK4 1 0.17 0.17 11 -1.99 0 13 3.87 No 17 2.12 Yes 0 0 No -29 0.79 Yes 41 83.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40287957 + NM_001013703 EIF2AK4 1 0.13 0.11 7 8.19 83.51 22 5.69 Yes 9 0.56 No 0 0 No -21 0.68 Yes 49 62.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 124106059 - NM_001414 EIF2B1 1 0.03 0.1 7 6.24 88.92 19 5 No 73 0.77 No 0 0 No -27 0.64 No 43 83.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 124109426 - NM_001414 EIF2B1 1 0.28 0.56 26 -10.3 0 13 4.24 No 27 0.75 No 21 0.62 Yes -8 0.39 No 59 26.14 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 124109471 - NM_001414 EIF2B1 1 0.4 0.76 36 7.57 86.87 28 5.66 Yes -2 0.02 No 0 0 No -27 0.85 Yes 43 87.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124109768 - NM_001414 EIF2B1 1 0.1 0.18 10 8.64 83.78 21 6.68 Yes 8 1.12 Yes 0 0 No -23 0.33 No 47 58.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 124112227 - NM_001414 EIF2B1 1 0.04 0.11 7 7.18 86.34 27 6.16 Yes 14 1.24 Yes 0 0 No -26 0.81 Yes 44 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124114852 - NM_001414 EIF2B1 1 0.08 0.22 14 9.67 80.77 25 6.16 Yes 12 1.47 Yes 24 0.91 Yes -24 0.76 Yes 46 78.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75472599 + NM_014239 EIF2B2 1 0.72 0.88 38 2.78 67.66 28 4.79 No 58 1.59 Yes 27 0.81 Yes -24 0.47 No 43 53.05 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 75472602 + NM_014239 EIF2B2 1 0.68 0.76 39 4.43 83.48 31 4.97 No 61 1.59 Yes 27 0.81 Yes -27 0.5 No 40 41.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 75473763 + NM_014239 EIF2B2 1 0.06 0.1 7 7.11 93.69 20 5.1 No 44 -1.67 No 23 0.51 Yes -19 0.45 No 51 67.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 45321727 - NM_020365 EIF2B3 1 0.31 0.21 12 9.94 81.47 18 7.94 Yes 23 0.19 No 0 0 No -25 0.56 No 45 67.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45323477 - NM_020365 EIF2B3 1 1.52 1.14 43 -2.74 66.53 47 5.94 Yes 11 1.51 Yes 0 0 No -23 0.89 Yes 47 86.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45328834 - NM_020365 EIF2B3 1 0.89 0.67 27 11.63 95.88 21 5.56 Yes 8 0.5 No 26 0.78 Yes -26 0.9 Yes 44 89.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 45390963 - NM_020365 EIF2B3 1 0.18 0.21 12 6.43 89.9 21 6.34 Yes 42 0.85 Yes 20 0.53 Yes -28 0.63 No 42 72.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 45403021 - NM_020365 EIF2B3 1 0.27 0.42 24 6.07 90.51 29 6.2 Yes 60 0.34 No 28 0.5 Yes -28 0.64 No 44 73.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 45406439 - NM_020365 EIF2B3 1 0.23 0.29 15 5.34 83.28 45 7 Yes 32 1.15 Yes 44 0.48 Yes -44 0.81 Yes 26 90.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 45424580 - NM_020365 EIF2B3 1 0.27 0.31 19 12.49 86.54 28 5.83 Yes 65 1.11 Yes 27 0.8 Yes -27 0.68 Yes 43 81.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 45435717 - NM_020365 EIF2B3 1 3.3 3.61 68 8.13 90.77 29 10.59 Yes 33 1.48 Yes 24 0.9 Yes -28 0.77 Yes 42 76.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 45440879 - NM_020365 EIF2B3 1 0.13 0.17 10 2.17 0 25 4.9 No 12 0.97 Yes 0 0 No -28 0.7 Yes 46 68.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 27590981 - NM_001318967 EIF2B4 1 2.79 3 67 3.88 76.15 29 5.66 Yes 32 1 Yes 25 0.61 Yes -25 0.68 Yes 45 68.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 27592080 - NM_001318967 EIF2B4 1 198.01 48.71 72 4.94 78.01 12 6.24 Yes -2 0.94 Yes 32 0.53 Yes -32 0.9 Yes 38 85.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183855661 + NM_003907 EIF2B5 1 0.26 0.28 14 5.57 88.37 18 4.9 No 5 1.11 Yes 26 0.65 Yes -17 0.8 Yes 53 85.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183856634 + NM_003907 EIF2B5 1 0.58 0.96 40 8.51 86.62 21 6.71 Yes 8 1.45 Yes 20 0.78 Yes -20 0.54 No 50 66.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 183859708 + NM_003907 EIF2B5 1 0.79 0.85 39 -7.05 70.52 25 5 No 16 0.39 No 28 0.84 Yes -24 0.93 Yes 46 94.1 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183860085 + NM_003907 EIF2B5 1 0.15 0.19 11 7.16 88.14 31 5.61 Yes 76 1.88 Yes 0 0 No -30 0.77 Yes 40 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 183861218 + NM_003907 EIF2B5 1 0.94 1.33 55 2.27 75.98 22 5.2 No 44 -4.24 No 18 0.92 Yes -21 0.35 No 46 45.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 183861915 + NM_003907 EIF2B5 1 0.22 0.33 19 4.42 0 11 3.43 No 11 0.42 No 0 0 No -51 0.59 No 19 57.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 183862677 + NM_003907 EIF2B5 1 0.44 0.58 30 0.9 0 11 3.87 No 37 0.01 No 0 0 No -34 0.61 No 36 74.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 206765576 - NM_006893 EIF2D 1 0.12 0.29 18 12.17 95.63 31 5.74 Yes 44 1.21 Yes 0 0 No -33 0.46 No 37 44.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 206767757 - NM_006893 EIF2D 1 0.29 0.69 32 7.03 79.94 25 6.16 Yes 12 2.11 Yes 0 0 No -24 0.9 Yes 46 94.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 206773173 - NM_006893 EIF2D 1 0.07 0.14 9 1.68 0 12 4.24 No 38 0.75 No 0 0 No -20 0.58 No 50 70.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 206774259 - NM_006893 EIF2D 1 0.66 1.43 47 2.46 74.1 18 5.26 No 20 -0.93 No 0 0 No -18 0.32 No 53 44.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 206775835 - NM_006893 EIF2D 1 0.09 0.17 11 -1.9 0 25 5.57 Yes 63 -2.28 No 26 0.62 Yes -27 0.66 Yes 43 70.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 206776763 - NM_006893 EIF2D 1 0.13 0.25 16 9.62 86.02 17 5.37 No 71 0.78 Yes 0 0 No -25 0.49 No 47 54.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 206776795 - NM_006893 EIF2D 1 0.08 0.17 9 6.43 82.51 24 5.29 No 55 0.81 Yes 0 0 No -23 0.88 Yes 47 85.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 206778084 - NM_006893 EIF2D 1 0.23 0.42 23 4.74 84.41 24 6.73 Yes 11 0.99 Yes 23 0.82 Yes -23 0.79 Yes 47 76.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 206778900 - NM_006893 EIF2D 1 0.07 0.15 8 9.52 76.04 20 5.95 Yes 47 1.46 Yes 29 0.64 Yes -19 0.68 Yes 51 83.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 206782402 - NM_006893 EIF2D 1 0.06 0.1 7 2.95 83.28 29 6.54 Yes 16 1.1 Yes 0 0 No -28 0.9 Yes 42 88.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67843957 + NM_004094 EIF2S1 1 0.21 0.93 40 8.05 83.94 41 4.5 No 22 1 Yes 0 0 No -34 0.85 Yes 36 87.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67847396 + NM_004094 EIF2S1 1 0.15 0.64 30 4.33 74.64 27 5.29 No 41 1.89 Yes 0 0 No -26 0.68 Yes 44 86.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67850004 + NM_004094 EIF2S1 1 0.02 0.15 8 3.71 83.48 11 4.9 No 64 -4.8 No 29 0.84 Yes -26 0.67 Yes 44 52.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 32677710 - NM_001316363 EIF2S2 1 0.08 0.69 34 -3.08 82.43 28 6.24 Yes 15 0.85 Yes 0 0 No -27 0.86 Yes 43 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 32677715 - NM_001316363 EIF2S2 1 0.04 0.31 17 -3.03 0 23 5.83 Yes 10 0.89 Yes 25 0.85 Yes -22 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 32679720 - NM_001316363 EIF2S2 1 1.36 5.46 69 9.72 88.71 32 6.99 Yes 15 0.75 No 0 0 No -27 0.86 Yes 43 90.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 32679720 - NM_001316363 EIF2S2 1 0.04 0.17 10 9.72 88.71 32 6.99 Yes 15 0.75 No 0 0 No -27 0.86 Yes 43 90.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 32684093 - NM_001316363 EIF2S2 1 0.05 0.36 21 9.9 88.27 26 6.95 Yes 67 -3.12 No 0 0 No -26 0.59 No 40 50.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 32685317 - NM_001316363 EIF2S2 1 0.01 0.13 8 1.35 0 15 3.87 No 20 0.69 No 0 0 No -32 0.91 Yes 38 95.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 32694096 - NM_001316363 EIF2S2 1 0.27 0.93 38 8.97 93 26 6.02 Yes 40 1.46 Yes 0 0 No -25 0.64 No 45 64.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 32697900 - NM_001316363 EIF2S2 1 0.12 0.33 15 4.74 84.41 32 7.33 Yes 35 1.31 Yes 0 0 No -31 0.92 Yes 39 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 24075758 + NM_001415 EIF2S3 1 0.15 2.01 54 -4.21 0 19 4.24 No 46 -2.81 No 0 0 No -40 0.31 No 32 45.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 24079925 + NM_001415 EIF2S3 1 0.03 0.4 21 6.11 91.72 37 6.47 Yes 24 0.93 Yes 0 0 No -36 0.83 Yes 34 75.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 24080052 + NM_001415 EIF2S3 1 0.08 1.21 47 4.85 0 21 4.58 No 8 0.84 Yes 0 0 No -20 0.82 Yes 50 92.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 24081072 + NM_001415 EIF2S3 1 0.12 1.07 40 4.9 80.8 23 4.85 No 10 0.59 No 0 0 No -22 0.9 Yes 48 93.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 24082111 + NM_001415 EIF2S3 1 0.01 0.1 7 10.75 98.13 29 6.61 Yes 6 0.62 No 0 0 No -28 0.8 Yes 42 77.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 24089677 + NM_001415 EIF2S3 1 0.05 0.74 35 -11.99 74.91 31 6.08 Yes 54 1.15 Yes 0 0 No -30 0.64 No 40 63.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 24089798 + NM_001415 EIF2S3 1 0.01 0.14 9 7.2 81.26 33 6.08 Yes 20 0.16 No 33 0.15 Yes -32 0.96 Yes 38 96.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 24090584 + NM_001415 EIF2S3 1 0.03 0.24 14 6.15 86.16 19 7.01 Yes 6 1.18 Yes 0 0 No -18 0.64 No 52 85.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 24092454 + NM_001415 EIF2S3 1 0.01 0.14 10 -3.13 59.01 31 5.63 Yes 33 0.59 No 0 0 No -20 0.43 No 36 52.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 24092466 + NM_001415 EIF2S3 1 0.02 0.24 12 6.3 0 16 4.58 No 45 0.59 No 0 0 No -21 0.83 Yes 49 61.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 24094005 + NM_001415 EIF2S3 1 0.04 0.5 18 8.89 86.87 20 5.43 No 7 1.15 Yes 0 0 No -27 0.53 No 51 59.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 24094316 + NM_001415 EIF2S3 1 0.26 3.21 69 7.41 92.65 57 5.74 Yes 44 1.67 Yes 0 0 No -23 0.63 No 47 64.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 24095609 + NM_001415 EIF2S3 1 0.01 0.13 7 1.35 0 12 4.24 No 46 0.66 No 0 0 No -44 0.46 No 26 61.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 120795777 - NM_003750 EIF3A 1 0.03 0.17 11 -4.3 0 38 7.12 Yes 25 1.98 Yes 0 0 No -37 0.76 Yes 33 89.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120809496 - NM_003750 EIF3A 1 0.07 0.13 7 -12.04 66.15 21 5.21 No 8 0.11 No 0 0 No -20 0.56 No 50 66.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 120809568 - NM_003750 EIF3A 1 0.08 0.14 8 5.18 80.82 59 8.32 Yes 68 0.7 No 0 0 No -32 0.35 No 42 47.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 120815953 - NM_003750 EIF3A 1 0.09 0.65 25 8.11 91.98 23 5.2 No 10 0.64 No 0 0 No -27 0.78 Yes 48 87.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 120820836 - NM_003750 EIF3A 1 0.02 0.1 7 1.06 0 31 6.4 Yes 18 0.4 No 0 0 No -28 0.61 No 42 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 120827099 - NM_003750 EIF3A 1 0.02 0.17 9 12.34 86.56 28 9.16 Yes 15 1.43 Yes 0 0 No -27 0.87 Yes 43 85.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120829163 - NM_003750 EIF3A 1 0.02 0.17 10 -4.75 0 31 6.92 Yes 18 0.95 Yes 0 0 No -25 0.4 No 45 53.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 120830518 - NM_003750 EIF3A 1 0.66 5.68 72 3.18 80.57 19 4.88 No 38 -3.05 No 0 0 No -24 0.71 Yes 46 51.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 2396819 + NM_001037283 EIF3B 1 0.03 0.11 7 3.33 75.82 20 4.9 No -4 0.7 No 0 0 No -19 0.88 Yes 51 86.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2403551 + NM_001037283 EIF3B 1 0.04 0.26 18 9.59 89.4 29 6.48 Yes 46 1.06 Yes 0 0 No -28 0.79 Yes 42 60.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 2406189 + NM_001037283 EIF3B 1 0.06 0.4 23 3.29 79.66 20 5.74 Yes 7 0.47 No 0 0 No -19 0.6 No 51 76.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 2406568 + NM_001037283 EIF3B 1 0.57 2.17 57 4.44 71.28 32 5.74 Yes 52 0.89 Yes 0 0 No -31 0.86 Yes 39 94.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2406613 + NM_001037283 EIF3B 1 0.06 0.24 14 4.59 75.32 23 6.08 Yes 64 0.78 Yes 28 0.9 Yes -22 0.87 Yes 48 89.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2407962 + NM_001037283 EIF3B 1 0.07 0.31 17 7.81 81.29 19 5.48 No 6 0.94 Yes 0 0 No -18 0.6 No 52 82.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 2409108 + NM_001037283 EIF3B 1 0.02 0.1 7 -1.87 73.94 27 7.68 Yes 14 1.15 Yes 0 0 No -27 0.82 Yes 43 74.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2414038 + NM_001037283 EIF3B 1 0.03 0.14 9 1.66 79.15 16 6.98 Yes 3 0.32 No 0 0 No -23 0.68 Yes 47 77.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2414164 + NM_001037283 EIF3B 1 0.02 0.13 9 1.6 78.28 26 5.48 No 13 0.82 Yes 0 0 No -25 0.89 Yes 45 93.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2419792 + NM_001037283 EIF3B 1 0.06 0.19 14 -1.1 0 15 4.21 No 20 -1.55 No 0 0 No -32 0.25 No 62 33.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 2419815 + NM_001037283 EIF3B 1 0.91 2.51 63 1.85 72.16 17 4.8 No 43 -1.47 No 25 0.77 Yes -25 0.42 No 45 37.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 2419877 + NM_001037283 EIF3B 1 0.06 0.21 10 -1.34 0 9 3.87 No -4 0.76 No 22 0.93 Yes -32 0.65 No 38 43.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 2419913 + NM_001037283 EIF3B 1 82.59 223.53 72 9.67 87.21 23 5.37 No 10 0.24 No 22 0.93 Yes -22 0.87 Yes 48 90.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2419918 + NM_001037283 EIF3B 1 10.34 27.88 72 1.97 0 28 5.82 Yes 15 0.23 No 0 0 No -27 0.86 Yes 43 89.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2420049 + NM_001037283 EIF3B 1 7.19 20.18 72 8.55 89.94 87 10.1 Yes 74 1.7 Yes 0 0 No -21 0.41 No 49 70.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 28729962 + NM_001199142 EIF3C 1 0.16 0.1 7 2.3 84.41 31 5.88 Yes 32 1.32 Yes 0 0 No -31 0.8 Yes 39 79.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28729966 + NM_001199142 EIF3C 1 1.89 1.06 41 3.01 0 35 6.2 Yes 36 1.3 Yes 0 0 No -35 0.82 Yes 35 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28734472 + NM_001199142 EIF3C 1 0.33 0.17 9 0.53 0 20 5.83 Yes 7 1.57 Yes 31 0.9 Yes -19 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 36907216 - NM_003753 EIF3D 1 0.38 1.76 55 7.61 82.08 26 5.48 No 13 0.94 Yes 25 0.93 Yes -25 0.81 Yes 45 78.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36912646 - NM_003753 EIF3D 1 0.01 0.11 8 2.04 0 16 3.01 No 24 1.11 Yes 0 0 No -36 0.75 Yes 34 87.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 36913541 - NM_003753 EIF3D 1 0.18 1.53 48 10.01 81.5 44 6.71 Yes 50 -2.35 No 35 0.21 Yes -43 0.78 Yes 41 45.2 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 36919327 - NM_003753 EIF3D 1 0.02 0.13 8 -1.11 76.45 26 5.27 No 13 0.52 No 0 0 No -25 0.75 Yes 45 70.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 36920779 - NM_003753 EIF3D 1 0.04 0.25 13 -14.84 0 29 5.25 No 3 0.82 Yes 0 0 No -23 0.86 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 36922953 - NM_003753 EIF3D 1 1.03 3.53 66 8.64 94.39 28 5.28 No 45 0.63 No 27 0.82 Yes -27 0.9 Yes 43 90.85 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 109214160 - NM_001568 EIF3E 1 0.01 0.1 7 2.48 0 15 5.18 No 2 0.81 Yes 30 0.9 Yes -23 0.78 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 109214174 - NM_001568 EIF3E 1 0.01 0.13 7 -1 0 26 5.48 No 56 0.75 No 30 0.9 Yes -9 0.42 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 109215368 - NM_001568 EIF3E 1 0.01 0.22 12 -14.34 0 16 3.87 No 37 0.48 No 26 0.6 Yes -15 0.62 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 109228740 - NM_001568 EIF3E 1 0.02 0.39 21 -12.77 73.68 18 4.33 No 5 1.55 Yes 0 0 No -24 0.73 Yes 40 73.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 109229688 - NM_001568 EIF3E 1 0.02 0.4 23 -8.9 0 23 6.25 Yes 10 1.2 Yes 0 0 No -26 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 109229689 - NM_001568 EIF3E 1 0.01 0.11 7 -11.26 0 22 6.17 Yes 9 1.2 Yes 0 0 No -25 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 109232060 - NM_001568 EIF3E 1 0.02 0.35 17 4.03 87.36 30 5.38 No 35 0.57 No 0 0 No -27 0.92 Yes 43 89.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 109233833 - NM_001568 EIF3E 1 0.02 0.29 16 6.04 86.18 40 7.35 Yes 27 0.14 No 24 0.5 Yes -32 0.57 No 38 60.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 109245414 - NM_001568 EIF3E 1 0.01 0.14 8 10.92 80.74 40 4.7 No 65 -1.1 No 0 0 No -31 0.68 Yes 39 61.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 109245902 - NM_001568 EIF3E 1 7.02 83.19 72 6.78 83.77 25 6.99 Yes 12 1.39 Yes 24 0.94 Yes -31 0.67 Yes 39 81.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 109247327 - NM_001568 EIF3E 1 0.05 1.11 43 5.35 0 27 5.11 No 14 0.82 Yes 0 0 No -27 0.7 Yes 43 86.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 109247331 - NM_001568 EIF3E 1 0.03 0.72 34 -6.01 0 23 4.85 No 10 0.85 Yes 0 0 No -23 0.67 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 109252328 - NM_001568 EIF3E 1 0.14 3.08 67 4.82 73.39 20 4.29 No -3 0.29 No 27 0.49 Yes -19 0.54 No 43 56.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 109254141 - NM_001568 EIF3E 1 0.02 0.22 14 -15.04 0 28 4.97 No 46 0.46 No 0 0 No -27 0.93 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 109254576 - NM_001568 EIF3E 1 0.05 0.56 29 3.6 72.36 29 5.59 Yes 56 0.19 No 28 0.94 Yes -28 0.49 No 42 80.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 109255690 - NM_001568 EIF3E 1 0.01 0.14 8 3.25 80.12 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.79 Yes 50 87.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 109255693 - NM_001568 EIF3E 1 0.25 2.33 62 5.2 85.02 18 7 Yes 5 1.23 Yes 28 0.21 Yes -17 0.42 No 53 77.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 10226536 - NM_003755 EIF3G 1 0.02 0.11 7 -6.43 0 13 4.36 No 38 -3.4 No 26 0.95 Yes -17 0.35 No 28 34.03 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 10227767 - NM_003755 EIF3G 1 0.09 0.65 33 3.43 75.06 29 6.24 Yes 2 1.13 Yes 0 0 No -28 0.91 Yes 42 92.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10227870 - NM_003755 EIF3G 1 0.04 0.29 15 -3.59 69.03 25 6.87 Yes 12 1.31 Yes 29 0.88 Yes -24 0.85 Yes 46 91.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10228410 - NM_003755 EIF3G 1 0.03 0.18 9 10.38 86.63 27 4.71 No 14 0.32 No 0 0 No -26 0.93 Yes 44 93.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10229234 - NM_003755 EIF3G 1 1.98 13.54 71 3.01 0 30 6.9 Yes 17 1.65 Yes 29 0.87 Yes -30 0.61 No 40 87.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 10229238 - NM_003755 EIF3G 1 0.04 0.28 15 2.3 84.41 26 6.6 Yes 13 1.67 Yes 29 0.87 Yes -26 0.61 No 44 87.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 10229743 - NM_003755 EIF3G 1 0.12 0.86 34 -10.55 0 15 3.4 No 67 0.13 No 18 0.8 Yes -18 0.81 Yes 50 60.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 10229800 - NM_003755 EIF3G 1 0.04 0.21 11 6.93 85.9 23 5.29 No 65 1.87 Yes 0 0 No -22 0.89 Yes 48 72.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10229932 - NM_003755 EIF3G 1 0.24 1.24 50 10.39 85.48 43 7 Yes NA NA NA 33 0.35 Yes -33 0.84 Yes 29 52.54 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 10230386 - NM_003755 EIF3G 1 0.18 1.14 46 -5.97 0 28 6.93 Yes 15 1.83 Yes 32 0.87 Yes -27 0.63 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 10230389 - NM_003755 EIF3G 1 0.11 0.67 35 -1.04 0 25 6.73 Yes 12 1.82 Yes 32 0.87 Yes -24 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 117657338 - NM_003756 EIF3H 1 0.01 0.15 10 -3.93 0 35 7.89 Yes 73 1.32 Yes 0 0 No -34 0.43 No 30 53.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 117669516 - NM_003756 EIF3H 1 0.01 0.11 7 3.57 81.25 20 4.21 No 51 0.93 Yes 0 0 No -23 0.47 No 11 29.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 117669533 - NM_003756 EIF3H 1 0.01 0.18 10 -0.29 58 14 4.55 No 34 0.93 Yes 0 0 No -50 0.84 Yes 20 88.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 117671209 - NM_003756 EIF3H 1 0.01 0.15 11 1.2 0 18 4.46 No 48 1.05 Yes 0 0 No -51 0.77 Yes 19 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 117671209 - NM_003756 EIF3H 1 0.01 0.1 7 1.2 0 18 4.46 No 48 1.05 Yes 0 0 No -51 0.77 Yes 19 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 117701380 - NM_003756 EIF3H 1 0.27 3.15 69 5.52 79.22 30 7.05 Yes 17 1.81 Yes 25 0.82 Yes -25 0.61 No 45 65.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 117723664 - NM_003756 EIF3H 1 0.01 0.15 10 5.62 75.22 35 6.69 Yes 42 1.12 Yes 0 0 No -35 0.61 No 35 71.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 117737337 - NM_003756 EIF3H 1 0.02 0.25 14 9.02 88.2 27 5.57 Yes 14 1.23 Yes 0 0 No -26 0.79 Yes 44 69.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 117746564 - NM_003756 EIF3H 1 0.34 3.28 64 4.94 82.64 17 5.47 No 4 1.45 Yes 25 0.92 Yes -25 0.9 Yes 45 80.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 117746594 - NM_003756 EIF3H 1 0.02 0.22 13 4.02 75.63 21 5.09 No 36 -2.91 No 20 0.52 Yes -20 0.6 No 50 79.48 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 117749527 - NM_003756 EIF3H 1 0.07 0.61 31 12.71 96.95 28 5.48 No 15 0.87 Yes 27 0.77 Yes -27 0.8 Yes 43 93.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 117763687 - NM_003756 EIF3H 1 0.01 0.13 7 9.33 89.55 39 7.28 Yes 26 1.75 Yes 0 0 No -38 0.71 Yes 35 65.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 32688141 + NM_003757 EIF3I 1 0.28 1.06 45 -0.74 66.09 27 6.32 Yes 14 2.13 Yes 23 0.93 Yes -26 0.91 Yes 44 93.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32690011 + NM_003757 EIF3I 1 0.01 0.13 9 -4.39 0 33 6.99 Yes 20 0.12 No 0 0 No -31 0.37 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32691749 + NM_003757 EIF3I 1 0.02 0.22 12 0.38 56.53 37 6.54 Yes 67 -2.28 No 20 0.23 Yes -34 0.55 No 36 27.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 32692006 + NM_003757 EIF3I 1 0.03 0.38 19 -20.19 0 24 6.16 Yes 11 1.65 Yes 0 0 No -23 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 32693564 + NM_003757 EIF3I 1 0.02 0.19 10 3.31 74.33 29 5.44 No 12 -2.05 No 0 0 No -24 0.59 No 46 69.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 32696721 + NM_003757 EIF3I 1 0.05 0.42 21 1.03 0 9 3.87 No 20 1.05 Yes 0 0 No -32 0.85 Yes 38 91.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32696860 + NM_003757 EIF3I 1 0.24 2.14 62 7.42 88.23 32 6.17 Yes 10 1.3 Yes 0 0 No -31 0.84 Yes 39 87.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44830769 + NM_003758 EIF3J 1 0.53 1.08 45 12.69 86.81 23 5.39 No 10 0.39 No 0 0 No -22 0.82 Yes 48 75.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44846754 + NM_003758 EIF3J 1 0.04 0.19 13 -0.84 0 42 6.76 Yes 29 0.76 No 0 0 No -26 0.29 No 41 32.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 44847817 + NM_003758 EIF3J 1 0.02 0.11 7 8.16 81.46 17 6.16 Yes 42 0.91 Yes 0 0 No -40 0.3 No 53 35.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 44848558 + NM_003758 EIF3J 1 0.13 0.67 34 9.55 87.64 23 5.07 No 15 0.7 No 0 0 No -28 0.56 No 43 67.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 44849667 + NM_003758 EIF3J 1 0.03 0.15 9 6.26 81.73 20 6.66 Yes 7 1.62 Yes 21 0.74 Yes -19 0.41 No 51 55.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 44849688 + NM_003758 EIF3J 1 0.02 0.1 7 -19.58 0 24 5.48 No 28 1.63 Yes 21 0.74 Yes -23 0.51 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 44850043 + NM_003758 EIF3J 1 0.17 0.75 34 9.55 91.5 35 5.74 Yes 76 0.88 Yes 0 0 No -28 0.88 Yes 42 79.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39114744 + NM_013234 EIF3K 1 0.05 0.69 34 4.3 0 19 4.33 No 6 0.33 No 0 0 No -18 0.9 Yes 52 55.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 39113912 + NM_013234 EIF3K 1 0.01 0.11 7 5.44 78.01 52 5.41 No 18 0.22 No 0 0 No -30 0.91 Yes 40 93.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39116671 + NM_013234 EIF3K 1 0.02 0.19 13 -4.18 0 22 6.2 Yes 9 1.32 Yes 24 0.67 Yes -22 0.79 Yes 48 77.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39119142 + NM_013234 EIF3K 1 0.02 0.18 12 10.84 96.14 31 5.57 Yes 18 1.74 Yes 30 0.78 Yes -24 0.69 Yes 46 56.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 39120651 + NM_013234 EIF3K 1 0.11 0.93 25 9.35 92.65 25 5.57 Yes 12 0.42 No 0 0 No -24 0.92 Yes 46 93.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39121341 + NM_013234 EIF3K 1 0.38 3.79 68 2.52 0 54 8.12 Yes 41 1.86 Yes 30 0.03 Yes -53 0.92 Yes 17 88.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39124023 + NM_013234 EIF3K 1 0.06 0.42 25 2.27 70.35 27 6.48 Yes 14 1.08 Yes 0 0 No -22 0.53 No 48 66.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39125636 + NM_013234 EIF3K 1 0.03 0.21 13 0.36 0 38 6.02 Yes 25 1.66 Yes 0 0 No -37 0.7 Yes 33 78.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39127506 + NM_013234 EIF3K 1 0.03 0.31 17 9.19 85.56 9 6.08 Yes -4 1.72 Yes 24 0.84 Yes -30 0.85 Yes 40 87.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39127530 + NM_013234 EIF3K 1 0.04 0.38 22 -19.26 0 33 5.74 Yes 20 1.94 Yes 0 0 No -32 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 38246530 + NM_016091 EIF3L 1 0.08 0.51 26 6.97 80.68 22 5.74 Yes 9 0.89 Yes 21 0.84 Yes -21 0.86 Yes 49 91.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38247289 + NM_016091 EIF3L 1 0.03 0.22 14 -13.31 63.87 38 6.63 Yes 25 0.12 No 0 0 No -37 0.6 No 33 76.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 38247397 + NM_016091 EIF3L 1 0.04 0.28 13 4.88 68.73 29 5.57 Yes 66 -4.07 No 0 0 No -28 0.93 Yes 42 97.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 38252974 + NM_016091 EIF3L 1 0.02 0.24 16 6.76 84.13 39 7.48 Yes 73 1.33 Yes 0 0 No -38 0.72 Yes 35 69.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 38256084 + NM_016091 EIF3L 1 0.02 0.18 11 6.79 79.33 20 7.61 Yes 7 1.42 Yes 0 0 No -23 0.23 No 48 43.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 38258976 + NM_016091 EIF3L 1 0.05 0.58 33 -0.18 0 24 8.58 Yes 11 0.68 No 0 0 No -29 0.59 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 38266183 + NM_016091 EIF3L 1 0.03 0.33 19 -12.08 0 38 8.77 Yes 58 -2.55 No 0 0 No -24 0.68 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 38267202 + NM_016091 EIF3L 1 0.02 0.25 15 0.97 83.14 32 5.66 Yes 27 0.04 No 33 0.36 Yes -29 0.65 No 41 80.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 38267206 + NM_016091 EIF3L 1 0.08 0.94 38 1.51 0 36 6 Yes 31 0.03 No 33 0.36 Yes -35 0.69 Yes 37 81.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38271849 + NM_016091 EIF3L 1 0.02 0.15 8 -10.07 71 32 7.13 Yes 19 0.97 Yes 0 0 No -31 0.96 Yes 39 96.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38273656 + NM_016091 EIF3L 1 0.01 0.1 7 4.08 78.05 26 5.29 No 60 -3.63 No 30 0.91 Yes -25 0.83 Yes 45 64.01 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 38282956 + NM_016091 EIF3L 1 0.1 1.44 49 1.64 83.28 50 6.81 Yes 37 1.07 Yes 26 0.8 Yes -26 0.77 Yes 44 68.02 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 32608479 + NM_006360 EIF3M 1 0.46 2.44 64 5.66 82 22 4.8 No 9 0.08 No 21 0.68 Yes -21 0.8 Yes 49 56.62 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 32608527 + NM_006360 EIF3M 1 0.09 0.46 25 7.67 79.69 24 5.48 No 57 0.16 No 22 0.76 Yes -23 0.87 Yes 47 84.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 32608591 + NM_006360 EIF3M 1 0.3 1.47 51 2.64 72.87 28 5.82 Yes 15 1.29 Yes 27 0.88 Yes -27 0.7 Yes 43 85.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 32611097 + NM_006360 EIF3M 1 0.02 0.19 13 -1.71 0 35 4.83 No 22 0.96 Yes 20 0.96 Yes -34 0.8 Yes 36 93.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 32610193 + NM_006360 EIF3M 1 0.02 0.18 9 2.8 66.75 41 5.11 No 66 0.92 Yes 0 0 No -36 0.48 No 34 76.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 32611097 + NM_006360 EIF3M 1 0.02 0.21 11 -1.71 0 35 4.83 No 22 0.96 Yes 20 0.96 Yes -34 0.8 Yes 36 93.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 32616527 + NM_006360 EIF3M 1 0.01 0.13 8 4.85 72.3 50 7.34 Yes 12 1.33 Yes 0 0 No -24 0.81 Yes 46 74.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 186502217 + NM_001967 EIF4A2 1 31.74 116.76 72 -1.28 0 20 4.58 No 7 1.53 Yes 19 0.97 Yes -19 0.94 Yes 51 90.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 186502354 + NM_001967 EIF4A2 1 0.03 0.13 8 -9.13 67.06 36 5.99 Yes -2 0.8 Yes 0 0 No -31 0.93 Yes 39 66.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 186506080 + NM_001967 EIF4A2 1 0.22 0.89 43 -3.82 55.29 41 6.07 Yes 28 0.09 No 25 0.75 Yes -40 0.54 No 30 48.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 186506098 + NM_001967 EIF4A2 1 52.74 205.01 72 1.53 75.62 26 5.2 No 46 0.08 No 25 0.75 Yes -25 0.59 No 45 50 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 78110045 - NM_014740 EIF4A3 1 0.05 0.15 11 5.74 77.86 23 6.74 Yes 28 0.65 No 0 0 No -29 0.7 Yes 48 65.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 78111323 - NM_014740 EIF4A3 1 0.04 0.15 10 -7.21 0 13 4.36 No 34 0.08 No 24 0.66 Yes -33 0.59 No 37 68.15 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 78112961 - NM_014740 EIF4A3 1 0.03 0.14 9 -1.2 0 25 7.37 Yes 12 2.07 Yes 0 0 No -24 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 78113548 - NM_014740 EIF4A3 1 0.13 0.32 16 -18.15 0 28 5.55 No 50 0.31 No 0 0 No -27 0.51 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 53402380 + NM_001300821 EIF4B 1 0.41 2.17 59 4.51 78.72 26 4.73 No 33 0.05 No 25 0.79 Yes -25 0.38 No 49 57.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 53412582 + NM_001300821 EIF4B 1 0.01 0.22 14 -12.25 0 30 5.5 No 17 1.52 Yes 0 0 No -29 0.71 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 53415499 + NM_001300821 EIF4B 1 0.46 6.5 71 10.44 76.83 32 5.98 Yes 75 0.39 No 31 0.73 Yes -29 0.9 Yes 41 92.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53415591 + NM_001300821 EIF4B 1 0.01 0.11 7 -22.08 0 23 6.24 Yes 10 0.44 No 0 0 No -22 0.69 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 53415596 + NM_001300821 EIF4B 1 0.02 0.26 17 4.68 0 10 4 No 15 0.42 No 0 0 No -27 0.75 Yes 43 74.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53416037 + NM_001300821 EIF4B 1 0.04 0.74 32 7.69 87.32 18 5.63 Yes 62 -5.79 No 31 0.89 Yes -31 0.72 Yes 39 82.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53416280 + NM_001300821 EIF4B 1 0.01 0.14 9 1.68 0 36 6.08 Yes 19 0.69 No 0 0 No -31 0.9 Yes 39 95.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53419010 + NM_001300821 EIF4B 1 0.14 1.28 45 3.57 89.99 26 5 No 72 -3.75 No 25 0.76 Yes -25 0.85 Yes 45 76.55 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53421535 + NM_001300821 EIF4B 1 0.02 0.21 11 -11.93 0 10 4 No 20 0.86 Yes 27 0.47 Yes -32 0.74 Yes 38 86.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53421567 + NM_001300821 EIF4B 1 0.13 1.17 47 -2.5 78.52 22 6.4 Yes 52 0.89 Yes 0 0 No -21 0.63 No 49 64.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 53421816 + NM_001300821 EIF4B 1 0.3 3.75 71 3.05 74.94 23 5.19 No 66 1.82 Yes 0 0 No -22 0.94 Yes 48 69.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53427574 + NM_001300821 EIF4B 1 0.18 2.81 66 -0.27 72.34 23 6.31 Yes 10 0.34 No 19 0.75 Yes -22 0.84 Yes 48 88.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53427697 + NM_001300821 EIF4B 1 0.02 0.25 14 -4.91 85.66 26 5.08 No 39 0.26 No 0 0 No -25 0.48 No 50 73.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 53433018 + NM_001300821 EIF4B 1 1.52 16.24 72 -1.32 68.32 43 7.64 Yes 30 1.34 Yes 26 0.72 Yes -23 0.61 No 40 51.8 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 53433418 + NM_001300821 EIF4B 1 0.08 1.14 42 -2.73 0 37 6.06 Yes 5 1.09 Yes 0 0 No -36 0.57 No 34 76.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 53433929 + NM_001300821 EIF4B 1 0.17 1.47 51 -2.1 68.21 46 6.02 Yes 9 0.78 Yes 0 0 No -32 0.79 Yes 38 82.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 99805183 - NM_001130678 EIF4E 1 0.62 1 42 4.19 0 31 5.92 Yes 48 0.78 Yes 0 0 No -31 0.53 No 39 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 99807698 - NM_001130678 EIF4E 1 3.43 7.08 71 8.46 93.81 21 5.58 Yes 0 1.19 Yes 20 0.81 Yes -20 0.73 Yes 50 87.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 99816420 - NM_001130678 EIF4E 1 0.1 0.58 25 7.23 74.62 30 5.65 Yes 32 0.4 No 0 0 No -29 0.92 Yes 41 92.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 99816715 - NM_001130678 EIF4E 1 0.09 0.44 24 10.28 90.54 26 5.73 Yes 2 0.64 No 25 0.53 Yes -25 0.42 No 39 58.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 233429347 + NM_001330202 EIF4E2 1 0.07 0.14 9 5.75 80.64 22 7.28 Yes 9 1.23 Yes 0 0 No -21 0.9 Yes 49 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 233431791 + NM_001330202 EIF4E2 1 0.17 0.43 24 -4.98 0 40 8.54 Yes 27 1.28 Yes 0 0 No -39 0.56 No 41 75.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 233433761 + NM_001330202 EIF4E2 1 0.27 0.57 27 0.43 66.55 36 7.53 Yes 23 1.68 Yes 0 0 No -35 0.54 No 35 52.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 72170676 + NM_004096 EIF4EBP2 1 0.1 0.21 11 6.44 72.54 43 6.89 Yes 56 -2.37 No 0 0 No -40 0.54 No 30 82.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 31842995 - NM_001164502 EIF4ENIF1 1 0.51 0.29 15 12.03 88.15 17 5.57 Yes 43 0.52 No 29 0.69 Yes -29 0.57 No 42 79.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 31843552 - NM_001164502 EIF4ENIF1 1 210.22 47.51 72 9.58 86.46 25 7.46 Yes 12 2.43 Yes 21 0.94 Yes -24 0.78 Yes 46 78.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 31845395 - NM_001164502 EIF4ENIF1 1 0.88 0.54 26 10.49 88.07 29 5.64 Yes 54 -0.87 No 22 0.62 Yes -22 0.53 No 48 61.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 31850264 - NM_001164502 EIF4ENIF1 1 0.3 0.32 20 6.72 84.1 26 5.34 No 24 0.44 No 0 0 No -25 0.71 Yes 45 65.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 31850339 - NM_001164502 EIF4ENIF1 1 0.51 0.49 27 4.64 81.06 18 4.9 No 36 0.81 Yes 0 0 No -23 0.36 No 22 46.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 31850354 - NM_001164502 EIF4ENIF1 1 0.24 0.28 13 -1.21 0 12 3.07 No 21 0.81 Yes 0 0 No -33 0.8 Yes 37 84.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 31850427 - NM_001164502 EIF4ENIF1 1 0.5 0.54 25 3.68 69.62 30 4.91 No 42 1.6 Yes 0 0 No -34 0.34 No 45 36.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 31867900 - NM_001164502 EIF4ENIF1 1 0.11 0.1 7 -2.39 0 27 6.58 Yes 14 0.99 Yes 0 0 No -32 0.47 No 38 53.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 184038630 + NM_004953 EIF4G1 1 0.16 0.99 38 7.17 80.84 35 6.37 Yes 22 0.5 No 26 0.79 Yes -34 0.67 Yes 36 71.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 184039041 + NM_004953 EIF4G1 1 0.03 0.14 8 0.26 71.55 16 4.45 No 3 0.23 No 20 0.59 Yes -15 0.56 No 50 62.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 184040613 + NM_004953 EIF4G1 1 0.01 0.13 9 0.48 0 32 6.34 Yes 19 0.64 No 0 0 No -23 0.66 No 47 74.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 184041195 + NM_004953 EIF4G1 1 0.13 0.35 24 5.11 89.24 44 6.86 Yes 31 1.94 Yes 40 0.78 Yes -43 0.65 No 27 83.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 184041195 + NM_004953 EIF4G1 1 205.07 497.35 72 5.11 89.24 44 6.86 Yes 31 1.94 Yes 40 0.78 Yes -43 0.65 No 27 83.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 184044404 + NM_004953 EIF4G1 1 0.06 0.38 19 -17.88 0 11 4.12 No 59 1.26 Yes 0 0 No -10 0.61 No 39 24.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 184044674 + NM_004953 EIF4G1 1 0.03 0.21 12 -4.64 0 9 3.87 No 17 0.35 No 0 0 No -29 0.91 Yes 41 85.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 184045006 + NM_004953 EIF4G1 1 0.03 0.19 10 -12.55 72.84 28 5.53 No 15 0.1 No 0 0 No -27 0.62 No 43 67.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 184045009 + NM_004953 EIF4G1 1 0.1 0.69 30 -2.65 0 9 3.87 No 18 0.11 No 0 0 No -30 0.56 No 40 68.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 184045620 + NM_004953 EIF4G1 1 0.03 0.17 10 -10.35 68.24 39 7 Yes 26 1.6 Yes 0 0 No -38 0.9 Yes 32 94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 184046678 + NM_004953 EIF4G1 1 0.02 0.14 9 -4.83 0 9 3.87 No 16 -1.67 No 26 0.81 Yes -28 0.25 No 29 46.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 184049262 + NM_004953 EIF4G1 1 0.09 0.56 29 0.8 74.19 27 8.03 Yes 22 0.84 Yes 0 0 No -27 0.58 No 44 75.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 184049484 + NM_004953 EIF4G1 1 0.06 0.46 26 -2.27 0 16 4.58 No 54 -4.13 No 22 0.42 Yes -15 0.57 No 55 51.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 184051888 + NM_004953 EIF4G1 1 0.02 0.15 10 7.96 85.72 33 7.14 Yes 56 -4 No 0 0 No -32 0.43 No 48 52.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 184051959 + NM_004953 EIF4G1 1 0.02 0.13 8 -7.05 0 17 4.16 No 61 -5.17 No 0 0 No -22 0.35 No 24 37.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 10820607 - NM_001042559 EIF4G2 1 0.21 3.4 66 -6.53 60.26 48 6.18 Yes 71 0.69 No 0 0 No -21 0.61 No 14 56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 10820610 - NM_001042559 EIF4G2 1 0.45 7.24 72 -0.77 60.49 45 6.03 Yes 68 0.7 No 0 0 No -18 0.48 No 17 58.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 10820791 - NM_001042559 EIF4G2 1 0.01 0.13 8 9.38 90.36 22 5.25 No 48 0.95 Yes 0 0 No -26 0.86 Yes 44 84.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 10820962 - NM_001042559 EIF4G2 1 0.01 0.13 8 2.78 0 13 4.36 No 19 1.39 Yes 0 0 No -31 0.91 Yes 39 95.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 10820988 - NM_001042559 EIF4G2 1 0.01 0.19 11 1.05 64.24 20 5.89 Yes 70 1.26 Yes 21 0.97 Yes -19 0.92 Yes 51 84.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 10821130 - NM_001042559 EIF4G2 1 0.01 0.22 13 5.89 68.45 25 5.73 Yes 12 0.62 No 0 0 No -24 0.49 No 46 67.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 10821322 - NM_001042559 EIF4G2 1 0.04 1 38 -2.35 0 19 4.24 No 43 0.37 No 24 0.76 Yes -14 0.37 No 47 21.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 10821331 - NM_001042559 EIF4G2 1 0.01 0.26 15 0.19 56.86 15 5.82 Yes 34 0.38 No 24 0.76 Yes -23 0.29 No 47 21.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 10821357 - NM_001042559 EIF4G2 1 0 0.1 7 6.86 86.18 21 5.1 No 8 0.41 No 0 0 No -20 0.58 No 50 67.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 10821719 - NM_001042559 EIF4G2 1 0.01 0.19 11 7.73 89.01 30 6.52 Yes 38 0.31 No 32 0.39 Yes -29 0.77 Yes 41 76.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 10821872 - NM_001042559 EIF4G2 1 0.01 0.14 10 2.35 68.12 28 5.68 Yes 38 0.15 No 23 0.57 Yes -50 0.81 Yes 20 87.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 10823733 - NM_001042559 EIF4G2 1 0.05 1.21 47 1.76 79.72 27 5.19 No 50 0.91 Yes 0 0 No -27 0.51 No 44 52.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 10823946 - NM_001042559 EIF4G2 1 0.02 0.4 21 3.3 77.05 23 6.24 Yes 40 0.8 Yes 0 0 No -22 0.53 No 48 58.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 10825743 - NM_001042559 EIF4G2 1 0.01 0.29 15 -1.14 0 11 4.12 No 15 0.57 No 0 0 No -37 0.44 No 40 45.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 10825915 - NM_001042559 EIF4G2 1 0.01 0.18 10 1.2 73.82 14 4.97 No 52 1.16 Yes 0 0 No -18 0.64 No 52 69.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 10825984 - NM_001042559 EIF4G2 1 0.01 0.18 9 -0.68 0 15 3.87 No 54 0.62 No 21 0.77 Yes -24 0.43 No 46 45.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 10827610 - NM_001042559 EIF4G2 1 0.01 0.13 9 -4.76 0 20 4.37 No 59 0.95 Yes 28 0.51 Yes -19 0.87 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 10827621 - NM_001042559 EIF4G2 1 0.01 0.25 11 -0.54 57.77 23 4.72 No 48 0.94 Yes 28 0.51 Yes -22 0.68 Yes 38 60.61 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 10828867 - NM_001042559 EIF4G2 1 1.47 8.89 72 7.99 83.29 18 8.35 Yes 75 0.9 Yes 40 0.68 Yes -21 0.52 No 15 34.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 10830056 - NM_001042559 EIF4G2 1 0.18 0.99 38 -2.89 60.03 10 7 Yes -3 1.19 Yes 19 0.08 Yes -44 0.47 No 26 78.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 21137396 - NM_003760 EIF4G3 1 0.27 0.31 13 4.62 64.9 23 4.08 No -4 0.74 No 26 0.72 Yes -22 0.77 Yes 48 74.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 21144029 - NM_003760 EIF4G3 1 0.51 0.46 23 1.04 73.24 29 6.27 Yes 75 1.06 Yes 0 0 No -28 0.61 No 34 50.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 21174437 - NM_003760 EIF4G3 1 0.68 0.9 43 8.67 90.18 18 5.81 Yes 5 0.09 No 0 0 No -20 0.34 No 50 33.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 21177919 - NM_003760 EIF4G3 1 0.21 0.26 14 6.91 77.04 25 5.29 No 12 0.67 No 0 0 No -24 0.79 Yes 46 75.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 21180114 - NM_003760 EIF4G3 1 0.36 0.25 15 6.34 77.74 29 5.53 No 38 0.5 No 0 0 No -28 0.71 Yes 42 61.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 21219223 - NM_003760 EIF4G3 1 32.29 30.08 72 11.57 93.14 31 6.15 Yes 18 1.07 Yes 30 0.94 Yes -30 0.85 Yes 40 93.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 21256742 - NM_003760 EIF4G3 1 0.1 0.13 9 5.69 80.82 20 5.99 Yes 7 0.05 No 0 0 No -19 0.86 Yes 51 89.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 21267889 - NM_003760 EIF4G3 1 2.7 3.36 65 8.08 88.78 26 5.48 No 64 1.04 Yes 22 0.9 Yes -25 0.85 Yes 45 87.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 21273830 - NM_003760 EIF4G3 1 1.25 1.19 48 3.7 0 38 6.41 Yes 66 1.2 Yes 0 0 No -37 0.81 Yes 33 83.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 21275457 - NM_003760 EIF4G3 1 0.97 0.89 43 3.01 0 39 7.08 Yes 26 1.1 Yes 0 0 No -38 0.83 Yes 32 78.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 21276602 - NM_003760 EIF4G3 1 107.43 57.9 72 4.13 72.78 36 7.65 Yes 23 1.19 Yes 32 0.84 Yes -35 0.88 Yes 35 89.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 21292238 - NM_003760 EIF4G3 1 1.6 0.82 34 6.4 93.28 25 6.99 Yes 12 0.78 Yes 0 0 No -24 0.77 Yes 46 80.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 21317159 - NM_003760 EIF4G3 1 0.36 0.4 23 3.18 82.75 27 5.61 Yes 14 0.46 No 0 0 No -26 0.74 Yes 44 86.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 21324127 - NM_003760 EIF4G3 1 0.65 0.75 37 9.33 83.7 48 10.65 Yes 35 2.79 Yes 32 0.04 Yes -47 0.87 Yes 23 88.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 21327801 - NM_003760 EIF4G3 1 0.21 0.21 13 -4.85 0 24 5.1 No 11 1.32 Yes 0 0 No -23 0.78 Yes 47 77.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 21327806 - NM_003760 EIF4G3 1 4.97 5.42 72 3.16 0 19 4.58 No 6 1.35 Yes 18 0.87 Yes -18 0.78 Yes 52 71.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 21327818 - NM_003760 EIF4G3 1 4.18 4.56 71 2.68 72.45 27 4.77 No 64 -5.83 No 18 0.87 Yes -22 0.55 No 44 66.13 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 21329281 - NM_003760 EIF4G3 1 4.21 4.24 70 7.49 78.03 26 5.48 No 13 0.78 Yes 0 0 No -25 0.92 Yes 45 88.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 21347115 - NM_003760 EIF4G3 1 0.15 0.15 11 4.06 67.76 36 6.37 Yes 41 0.07 No 0 0 No -35 0.47 No 35 71.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 21373539 - NM_003760 EIF4G3 1 0.21 0.24 12 7.68 79.37 38 9.34 Yes 60 0.11 No 0 0 No -38 0.7 Yes 32 56.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 73590073 + NM_022170 EIF4H 1 0.01 0.11 7 7.65 84.58 26 5.2 No 13 0.98 Yes 0 0 No -25 0.66 No 45 71.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 73602648 + NM_022170 EIF4H 1 0.11 0.56 28 6.54 89.56 20 4.9 No 73 -4.89 No 0 0 No -19 0.57 No 53 74.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 73609500 + NM_022170 EIF4H 1 0.05 0.43 20 0.61 81.06 28 8.77 Yes 15 1.51 Yes 0 0 No -27 0.92 Yes 43 95.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103805053 + NM_183004 EIF5 1 0.03 0.13 7 -0.31 69.89 19 4.76 No 28 1.29 Yes 27 0.82 Yes -40 0.62 No 30 81.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 103805509 + NM_183004 EIF5 1 0.04 0.13 9 -12.05 0 25 7.14 Yes 12 1.27 Yes 0 0 No -24 0.66 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 103805976 + NM_183004 EIF5 1 0.02 0.17 10 -17.27 0 24 4.9 No 11 0.92 Yes 0 0 No -23 0.94 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7213459 + NM_001143762 EIF5A 1 0.01 0.19 12 1.91 79.24 23 5.4 No 38 0.97 Yes 0 0 No -22 0.78 Yes 35 90.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7213495 + NM_001143762 EIF5A 1 0.01 0.32 17 2.17 78.82 28 5.78 Yes 74 0.94 Yes 0 0 No -27 0.71 Yes 43 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7214621 + NM_001143762 EIF5A 1 0 0.13 9 0.98 76.79 23 3.75 No 1 -0.83 No 0 0 No -25 0.63 No 45 86.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7214683 + NM_001143762 EIF5A 1 0 0.13 8 3.27 81.96 13 4.9 No 28 0.72 No 0 0 No -40 0.62 No 30 85.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7214707 + NM_001143762 EIF5A 1 0 0.21 12 5.61 86.44 14 5.56 Yes 52 0.71 No 0 0 No -23 0.47 No 47 46.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 100012864 + NM_015904 EIF5B 1 0.03 0.11 7 5.6 83.29 23 5 No 10 1.36 Yes 0 0 No -22 0.84 Yes 48 92.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 99970499 + NM_015904 EIF5B 1 0.49 0.76 33 8.06 91.51 17 4.81 No 36 0.39 No 0 0 No -25 0.79 Yes 45 92.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 99976736 + NM_015904 EIF5B 1 0.09 0.14 8 5.3 82.48 28 5.95 Yes 75 0.42 No 0 0 No -27 0.51 No 43 87.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 99979873 + NM_015904 EIF5B 1 0.13 0.46 23 9.52 86.24 33 6.08 Yes 20 1.81 Yes 0 0 No -32 0.68 Yes 38 89.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 99988121 + NM_015904 EIF5B 1 0.38 1.35 49 -4.66 73.48 39 7.16 Yes 49 0.74 No 0 0 No -25 0.7 Yes 28 46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 99992812 + NM_015904 EIF5B 1 1.43 2.72 65 2.37 77.43 40 8.41 Yes 27 1.13 Yes 0 0 No -29 0.62 No 41 80.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 100000903 + NM_015904 EIF5B 1 0.04 0.11 7 3.99 74.7 28 6.32 Yes 15 1.06 Yes 0 0 No -27 0.86 Yes 43 72.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33867150 - NR_052022 EIF6 1 0.14 0.71 35 10.73 92.54 25 6.46 Yes 12 1.72 Yes 0 0 No -24 0.9 Yes 46 93.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33868626 - NR_052022 EIF6 1 0.84 0.15 9 -3.15 0 10 4 No 19 1.22 Yes 0 0 No -31 0.86 Yes 39 89.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33868633 - NR_052022 EIF6 1 2918.19 451.94 72 7.86 90.48 17 6.35 Yes 12 1.24 Yes 24 0.89 Yes -24 0.93 Yes 46 92.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 33868633 - NR_052022 EIF6 1 2.09 0.18 11 7.86 90.48 17 6.35 Yes 12 1.24 Yes 24 0.89 Yes -24 0.93 Yes 46 92.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 33872063 - NR_052022 EIF6 1 0.05 0.26 16 -26.06 0 20 3.98 No 57 -1.78 No 0 0 No -23 0.62 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 48510856 + NM_018696 ELAC1 1 19.01 7.31 72 7.17 83.48 24 5.29 No 45 0.95 Yes 0 0 No -24 0.73 Yes 46 86.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 12897172 - NM_001165962 ELAC2 1 0.08 0.13 8 -7.99 0 14 3.87 No 1 -0.88 No 25 0.92 Yes -13 0.4 No 62 37.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 12898196 - NM_001165962 ELAC2 1 1.15 1.79 61 4.45 0 9 3.87 No 69 -3.06 No 0 0 No -22 0.75 Yes 48 80.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 12898216 - NM_001165962 ELAC2 1 0.09 0.18 10 -10.54 0 14 4.12 No 63 -3.96 No 26 0.52 Yes -12 0.61 No 58 38.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 12901784 - NM_001165962 ELAC2 1 0.12 0.22 13 6.37 84.58 31 4.8 No 70 0.43 No 0 0 No -27 0.61 No 47 53.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 12905674 - NM_001165962 ELAC2 1 5.56 15.89 72 4.35 80.93 25 7.74 Yes 62 0.66 No 0 0 No -27 0.69 Yes 43 88.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 12906910 - NM_001165962 ELAC2 1 0.13 0.32 19 1.12 70.13 22 5.29 No 9 0.64 No 22 0.73 Yes -21 0.8 Yes 49 87.98 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 12908388 - NM_001165962 ELAC2 1 0.94 1.22 42 5.77 84.44 22 5 No 52 0.66 No 0 0 No -21 0.74 Yes 49 80.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 12919130 - NM_001165962 ELAC2 1 0.05 0.13 8 5.81 86.58 16 5.38 No 28 0.85 Yes 0 0 No -22 0.63 No 48 53.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8032585 - NM_001419 ELAVL1 1 1.2 4.9 72 4.32 79.9 29 5.62 Yes 55 -4.59 No 0 0 No -28 0.47 No 45 62.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8038510 - NM_001419 ELAVL1 1 0.34 1.44 49 2.88 64.42 26 6.07 Yes 0 -2.22 No 25 0.81 Yes -25 0.88 Yes 45 93.31 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8048026 - NM_001419 ELAVL1 1 0.11 0.42 23 9.72 90.4 21 5.92 Yes 8 1.07 Yes 0 0 No -20 0.89 Yes 50 86.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8054388 - NM_001419 ELAVL1 1 0.17 0.61 29 9.63 89.61 34 7.74 Yes 21 1.68 Yes 0 0 No -33 0.79 Yes 37 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 41508155 - NM_172373 ELF1 1 0.05 0.13 9 -3.61 0 16 4.34 No 30 1.69 Yes 0 0 No -34 0.6 No 28 78.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 41524038 - NM_172373 ELF1 1 0.84 2.35 64 4.98 67.16 23 5.74 Yes 10 1.02 Yes 22 0.85 Yes -22 0.63 No 48 72.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 41524062 - NM_172373 ELF1 1 0.05 0.15 9 4.9 77.94 19 4.79 No 52 0.41 No 22 0.85 Yes -29 0.7 Yes 41 72.36 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 41525838 - NM_172373 ELF1 1 0.05 0.15 9 5.2 85.02 18 5.39 No 5 1.09 Yes 22 0.42 Yes -17 0.56 No 53 81.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 41535698 - NM_172373 ELF1 1 0.41 1.56 54 10.99 92.6 26 5.91 Yes 13 0.73 No 0 0 No -26 0.46 No 45 57.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 41537700 - NM_172373 ELF1 1 0.03 0.13 7 3.36 62.1 34 6.24 Yes 47 1.37 Yes 0 0 No -33 0.85 Yes 37 85.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 41541154 - NM_172373 ELF1 1 0.08 0.26 16 5.72 83.83 22 5.97 Yes 42 0.35 No 0 0 No -21 0.76 Yes 49 65.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 41543665 - NM_172373 ELF1 1 0.04 0.17 9 7.59 89.35 32 6.08 Yes 16 0.66 No 0 0 No -31 0.44 No 39 58.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 41567359 - NM_172373 ELF1 1 0.94 1.63 55 7.36 84.47 38 5.97 Yes 49 -0.87 No 0 0 No -32 0.7 Yes 38 83.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41572256 - NM_172373 ELF1 1 0.12 0.24 14 8.77 94.68 25 5.2 No 51 1 Yes 0 0 No -24 0.81 Yes 46 80.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 41574760 - NM_172373 ELF1 1 0.09 0.15 10 2.9 80.23 21 5.02 No 8 0.36 No 0 0 No -26 0.74 Yes 44 75.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41587331 - NM_172373 ELF1 1 1.35 2.33 59 9.09 85.93 29 5.3 No 21 0.27 No 0 0 No -28 0.45 No 42 74.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 41588358 - NM_172373 ELF1 1 3.75 6.51 71 6.32 78.02 34 6.6 Yes 51 0.42 No 0 0 No -29 0.45 No 41 72.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 41588486 - NM_172373 ELF1 1 1.46 2.51 47 11.2 95.3 17 5.92 Yes 4 0.74 No 0 0 No -32 0.71 Yes 38 72.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41588562 - NM_172373 ELF1 1 0.77 1.32 49 4.11 85.94 32 6.41 Yes 19 1.13 Yes 0 0 No -27 0.9 Yes 43 92.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 41591920 - NM_172373 ELF1 1 0.72 1.35 45 9.86 84.31 39 6.27 Yes 26 1.32 Yes 0 0 No -38 0.87 Yes 32 93.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 139980757 - NM_001331036 ELF2 1 0.85 0.46 26 0.58 0 34 6.06 Yes 66 0.93 Yes 0 0 No -33 0.55 No 37 74.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 139983179 - NM_001331036 ELF2 1 0.36 0.15 11 2.79 0 17 3.11 No 47 0.33 No 0 0 No -21 0.43 No 49 56.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 139986032 - NM_001331036 ELF2 1 1.18 0.56 26 4.57 87.93 46 5.59 Yes 33 0.62 No 0 0 No -39 0.77 Yes 31 87.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 139993158 - NM_001331036 ELF2 1 103.37 42.4 72 7.21 80.47 9 6.24 Yes 65 0.66 No 33 0.18 Yes -40 0.68 Yes 32 61.63 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 140023508 - NM_001331036 ELF2 1 2.93 0.13 9 9.85 87 32 8.37 Yes 19 1.59 Yes 0 0 No -31 0.95 Yes 39 95.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 140037906 - NM_001331036 ELF2 1 14.42 1 37 4.02 89.7 24 5.18 No 69 0.95 Yes 0 0 No -23 0.71 Yes 47 83.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 140037962 - NM_001331036 ELF2 1 13.97 0.86 36 5.13 81.07 26 5.77 Yes 13 0.97 Yes 28 0.73 Yes -25 0.53 No 42 52.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 140039105 - NM_001331036 ELF2 1 5.85 0.38 17 6.24 88.76 32 6.53 Yes 19 1.13 Yes 31 0.8 Yes -31 0.82 Yes 39 88.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 140057427 - NM_001331036 ELF2 1 1.65 0.33 19 5.75 68.4 32 5.23 No 19 0.37 No 0 0 No -32 0.65 No 38 86.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 129205204 - NM_001421 ELF4 1 0.17 0.13 8 1.44 0 24 6.48 Yes 11 1.55 Yes 0 0 No -23 0.97 Yes 47 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 129208184 - NM_001421 ELF4 1 1.41 1.42 48 4.23 66.77 37 7.21 Yes 24 1.29 Yes 0 0 No -36 0.93 Yes 34 95.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 129208703 - NM_001421 ELF4 1 0.47 0.38 21 6.78 85.02 15 4.18 No 34 0.47 No 0 0 No -21 0.57 No 49 71.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 129212927 - NM_001421 ELF4 1 0.15 0.13 9 9.42 98.01 36 8.63 Yes 23 1.48 Yes 0 0 No -35 0.94 Yes 35 92.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47497774 - NM_001114123 ELK1 1 0.28 0.39 19 6.08 78.2 24 4.9 No 11 1.29 Yes 0 0 No -23 0.97 Yes 47 97.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47508767 - NM_001114123 ELK1 1 0.4 0.17 10 10.56 90.45 32 7.36 Yes 19 0.45 No 31 0.69 Yes -31 0.72 Yes 39 69.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 96591803 + NM_005230 ELK3 1 8.69 1.25 49 5.83 83.84 62 4.42 No 71 0.19 No 29 0.29 Yes -23 0.55 No 47 67.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 205587949 - NM_001973 ELK4 1 1.12 2.5 62 3.31 83 29 6.81 Yes 16 0.48 No 0 0 No -28 0.59 No 42 69.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 205590628 - NM_001973 ELK4 1 0.37 0.51 28 8.22 93.84 26 4.21 No 46 0.44 No 0 0 No -29 0.35 No 45 34.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 205597003 - NM_001973 ELK4 1 3.29 2.85 21 10.5 82 26 7.1 Yes 46 1.97 Yes 0 0 No -25 0.57 No 45 59.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18557287 - NM_006532 ELL 1 0.3 0.32 17 -3.25 0 29 5.91 Yes 16 1.02 Yes 0 0 No -28 0.94 Yes 42 96.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18561783 - NM_006532 ELL 1 1.37 0.74 40 2.15 71.15 22 6.07 Yes 36 1.29 Yes 0 0 No -26 0.9 Yes 44 72.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18586744 - NM_006532 ELL 1 1.06 0.92 38 11.73 86.54 31 5.57 Yes 56 1.13 Yes 30 0.67 Yes -30 0.87 Yes 40 81.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 95224687 - NM_012081 ELL2 1 0.03 0.22 11 1.12 0 40 10.37 Yes 27 1.4 Yes 0 0 No -39 0.96 Yes 31 96.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 95225949 - NM_012081 ELL2 1 0.03 0.15 9 2.28 78.09 16 4.21 No 3 0.93 Yes 0 0 No -26 0.44 No 46 41.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 95225973 - NM_012081 ELL2 1 0.09 0.57 30 6.2 77.05 18 4.78 No 29 0.6 No 0 0 No -24 0.91 Yes 46 88.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 95226112 - NM_012081 ELL2 1 0.16 1 41 4.18 77.99 26 6.08 Yes 50 0.16 No 0 0 No -25 0.45 No 45 70.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 95226977 - NM_012081 ELL2 1 0.02 0.19 13 -5.84 0 20 6.37 Yes 35 0.49 No 0 0 No -30 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 95226978 - NM_012081 ELL2 1 0.03 0.25 16 -9.92 0 19 6.29 Yes 34 0.49 No 0 0 No -29 0.53 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 95232822 - NM_012081 ELL2 1 0.03 0.22 14 9.01 85.22 28 4.53 No 49 -3.38 No 0 0 No -27 0.34 No 45 46.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 95236484 - NM_012081 ELL2 1 0.04 0.21 11 -12.07 0 28 6.19 Yes 15 0.73 No 0 0 No -27 0.78 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 95236781 - NM_012081 ELL2 1 0.06 0.33 20 -3.45 0 32 6.73 Yes 19 1.64 Yes 0 0 No -31 0.72 Yes 39 79.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 95242581 - NM_012081 ELL2 1 0.91 3.25 67 7.84 84.41 29 5.14 No 16 0.07 No 0 0 No -29 0.36 No 41 37.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 95249586 - NM_012081 ELL2 1 0.03 0.14 9 -2.05 0 20 4.58 No 54 0.57 No 0 0 No -19 0.87 Yes 51 82.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 95253579 - NM_012081 ELL2 1 0.03 0.14 9 6.41 77.1 28 4.83 No 73 1.23 Yes 0 0 No -27 0.66 No 43 68.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 95258922 - NM_012081 ELL2 1 0.06 0.25 16 8.06 87.44 48 6.73 Yes 35 0.97 Yes 0 0 No -22 0.63 No 23 85.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 95268418 - NM_012081 ELL2 1 10.75 46.53 72 9.71 79.05 39 5.33 No 57 1.13 Yes 0 0 No -31 0.7 Yes 39 74.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 95272088 - NM_012081 ELL2 1 0.04 0.22 10 9.02 93.15 21 5.82 Yes 60 -3.18 No 0 0 No -21 0.86 Yes 49 88.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44065422 - NM_025165 ELL3 1 6.55 1.54 47 3.44 85.05 27 6.98 Yes 14 0.62 No 23 0.91 Yes -26 0.7 Yes 44 68.88 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 36904517 - NM_001206482 ELMO1 1 0.35 0.68 37 11.82 80.15 28 6.56 Yes 15 1.23 Yes 0 0 No -27 0.95 Yes 43 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 36911909 - NM_001206482 ELMO1 1 0.07 0.15 10 9.92 78.64 26 7.68 Yes 13 1.55 Yes 0 0 No -25 0.96 Yes 45 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 37140400 - NM_001206482 ELMO1 1 0.06 0.14 8 13.67 88.01 31 5.92 Yes 18 0.96 Yes 0 0 No -30 0.92 Yes 40 95.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 37147037 - NM_001206482 ELMO1 1 0.18 0.38 19 9.44 83.22 25 5.29 No 12 0.69 No 0 0 No -24 0.74 Yes 46 83.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 37166233 - NM_001206482 ELMO1 1 0.05 0.1 7 6.42 75.68 37 4.62 No 51 0.05 No 0 0 No -31 0.58 No 39 60.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 37212588 - NM_001206482 ELMO1 1 0.17 0.29 19 9.63 96.58 38 5.02 No 12 0.91 Yes 0 0 No -24 0.82 Yes 46 86.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 37244093 - NM_001206482 ELMO1 1 0.06 0.1 7 -2.3 70.73 30 7.52 Yes 33 0.82 Yes 0 0 No -29 0.96 Yes 41 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 37253061 - NM_001206482 ELMO1 1 0.06 0.13 8 -28.1 0 64 8.06 Yes 51 0.94 Yes 0 0 No -23 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 37257362 - NM_001206482 ELMO1 1 0.12 0.29 17 0.18 64.34 63 8.09 Yes 50 1.6 Yes 29 0.03 Yes -55 0.71 Yes 15 67.82 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 37272212 - NM_001206482 ELMO1 1 0.05 0.13 9 6.26 83.3 22 4.42 No 33 1.04 Yes 0 0 No -21 0.56 No 49 67.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 37342318 - NM_001206482 ELMO1 1 0.05 0.15 11 9.03 92.02 14 4.86 No 1 1.55 Yes 0 0 No -19 0.78 Yes 51 86.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 37355563 - NM_001206482 ELMO1 1 0.05 0.11 8 -13.01 0 33 6 Yes 20 1.32 Yes 0 0 No -32 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 37355564 - NM_001206482 ELMO1 1 0.06 0.11 8 -14.09 0 32 5.92 Yes 19 1.32 Yes 0 0 No -31 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 37367425 - NM_001206482 ELMO1 1 0.2 0.39 16 8.98 93.5 26 6.61 Yes 13 0.65 No 0 0 No -25 0.85 Yes 45 77.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 37368651 - NM_001206482 ELMO1 1 0.07 0.17 11 10.56 86.77 29 6.48 Yes 16 2.05 Yes 0 0 No -28 0.83 Yes 42 85.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 37378493 - NM_001206482 ELMO1 1 0.64 1.22 51 6.23 89.81 31 5.83 Yes 49 0.86 Yes 0 0 No -30 0.93 Yes 40 91.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 37378496 - NM_001206482 ELMO1 1 0.99 1.92 52 5.39 82.45 28 5.57 Yes 46 0.87 Yes 0 0 No -27 0.94 Yes 43 92.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44997064 - NM_001318253 ELMO2 1 0.13 0.1 7 6.53 83.14 19 4.8 No 6 0.53 No 0 0 No -18 0.88 Yes 52 83.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 44997605 - NM_001318253 ELMO2 1 0.71 0.63 34 -6.87 80.56 26 7.08 Yes 13 0.94 Yes 0 0 No -25 0.85 Yes 45 90.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 45016071 - NM_001318253 ELMO2 1 1.48 1.06 47 -0.11 0 9 3.87 No 55 1.7 Yes 40 0.47 Yes -46 0.88 Yes 24 86.8 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 45016268 - NM_001318253 ELMO2 1 0.26 0.19 12 11.74 93.82 40 6.08 Yes 24 0.84 Yes 35 0.26 Yes -26 0.69 Yes 44 74.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 45023143 - NM_001318253 ELMO2 1 40.4 18.5 72 11.66 92.96 32 5.83 Yes 32 1.45 Yes 27 0.48 Yes -27 0.72 Yes 43 83.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 45023143 - NM_001318253 ELMO2 1 21.72 9.65 72 11.66 92.96 32 5.83 Yes 32 1.45 Yes 27 0.48 Yes -27 0.72 Yes 43 83.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 45023168 - NM_001318253 ELMO2 1 0.83 0.38 22 2.83 0 20 6.93 Yes 7 1.46 Yes 27 0.48 Yes -28 0.53 No 42 60.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 45023168 - NM_001318253 ELMO2 1 0.34 0.15 10 2.83 0 20 6.93 Yes 7 1.46 Yes 27 0.48 Yes -28 0.53 No 42 60.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 45028611 - NM_001318253 ELMO2 1 0.51 0.18 8 6.73 86.87 18 5.39 No 5 1.07 Yes 0 0 No -22 0.55 No 53 79.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 67235884 + NM_024712 ELMO3 1 9.22 0.38 21 0.02 0 31 7.61 Yes 18 0.59 No 0 0 No -30 0.75 Yes 40 78.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 141457437 + NM_153702 ELMOD2 1 0.37 0.19 12 4.68 65.02 31 6.25 Yes 18 1.65 Yes 0 0 No -30 0.77 Yes 40 80.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 141464623 + NM_153702 ELMOD2 1 2.41 0.67 32 1.12 74.53 24 5.1 No 20 1.32 Yes 0 0 No -23 0.89 Yes 47 94.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 141464870 + NM_153702 ELMOD2 1 5 1.44 52 8.99 83.23 28 6.16 Yes 15 0.89 Yes 0 0 No -23 0.73 Yes 47 69.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 141471024 + NM_153702 ELMOD2 1 0.44 0.14 9 9.18 88.76 20 7.14 Yes 7 1.15 Yes 0 0 No -19 0.74 Yes 51 88.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85598213 + NM_001329791 ELMOD3 1 0.43 0.13 8 -2.9 0 45 6.49 Yes 32 0.26 No 0 0 No -31 0.71 Yes 42 42.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 85605067 + NM_001329791 ELMOD3 1 2.35 0.56 29 2.34 70.43 28 8.28 Yes 67 0.96 Yes 0 0 No -27 0.92 Yes 43 96.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85614220 + NM_001329791 ELMOD3 1 8.52 2.14 64 10.36 81.55 40 5.88 Yes 2 0.93 Yes 31 0.68 Yes -28 0.36 No 42 60.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 74186084 - NM_001043318 ELMSAN1 1 0.31 0.38 19 3.76 86.63 24 5.1 No 11 -0.21 No 0 0 No -23 0.96 Yes 47 96.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 74189602 - NM_001043318 ELMSAN1 1 0.34 0.72 30 6.11 87.11 23 5 No 46 -4.02 No 0 0 No -20 0.6 No 50 31.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74192114 - NM_001043318 ELMSAN1 1 0.16 0.21 13 5.42 77.39 33 7.87 Yes 20 1.54 Yes 0 0 No -32 0.97 Yes 38 98.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74196883 - NM_001043318 ELMSAN1 1 0.64 0.76 32 8.14 84.37 28 6.24 Yes 15 0.93 Yes 27 0.7 Yes -27 0.66 No 43 68.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 24080606 + NM_003198 ELOA 1 0.33 0.65 33 7.36 91.13 22 5.1 No 47 0.07 No 0 0 No -47 0.8 Yes 51 48.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 24080610 + NM_003198 ELOA 1 0.08 0.15 9 -5.69 0 26 5.48 No 51 0.05 No 0 0 No -51 0.78 Yes 19 83.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 24080826 + NM_003198 ELOA 1 0.11 0.19 11 1.57 73.39 29 5.31 No 62 0.44 No 28 0.92 Yes -28 0.83 Yes 42 75.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 24083276 + NM_003198 ELOA 1 0.27 0.33 16 5.89 86.81 23 4.32 No 67 0.81 Yes 0 0 No -27 0.53 No 43 68.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 24098374 - NR_038280 ELOA-AS1 1 11.57 1.28 46 6.53 86.16 20 5.57 Yes 74 1.04 Yes 24 0.54 Yes -30 0.38 No 51 67.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 2822124 - NM_007108 ELOB 1 0.35 2.72 66 3.86 81 24 5.29 No 45 -2.6 No 22 0.63 Yes -21 0.66 Yes 49 31.79 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 2823835 - NM_007108 ELOB 1 0.11 0.85 43 7.71 80.55 30 5.73 Yes -2 0.29 No 0 0 No -26 0.35 No 41 48.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2824598 - NM_007108 ELOB 1 0.02 0.14 9 5.26 82.05 28 5.74 Yes 5 0.07 No 0 0 No -28 0.72 Yes 42 73.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2825627 - NM_007108 ELOB 1 0.13 1.01 42 7.64 72.54 39 6.71 Yes 26 0.92 Yes 38 0.49 Yes -38 0.77 Yes 32 82.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 74867973 - NM_001204861 ELOC 1 0.03 0.19 13 3.2 87.29 15 5.2 No 2 0.97 Yes 0 0 No -14 0.38 No 56 54.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 74867993 - NM_001204861 ELOC 1 0.12 0.82 42 -14.72 0 11 3.87 No 35 0.86 Yes 0 0 No -47 0.67 Yes 23 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 74867997 - NM_001204861 ELOC 1 0.2 1.47 53 -10.41 0 44 7.09 Yes 31 0.87 Yes 0 0 No -43 0.42 No 27 79.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 74867999 - NM_001204861 ELOC 1 0.07 0.47 26 -6.67 80.24 42 6.97 Yes 29 0.87 Yes 0 0 No -28 0.38 No 29 75.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 74868001 - NM_001204861 ELOC 1 0.23 1.61 54 -2.95 83.2 40 6.85 Yes 27 0.88 Yes 0 0 No -26 0.37 No 31 76.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 74871369 - NM_001204861 ELOC 1 0.05 0.33 18 3.97 70.72 51 6.56 Yes 13 1.68 Yes 0 0 No -25 0.82 Yes 45 82.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 74875893 - NM_001204861 ELOC 1 0.43 0.19 13 1.41 78.75 18 5.7 Yes 5 2.2 Yes 0 0 No -27 0.72 Yes 43 63.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 11664631 - NM_032377 ELOF1 1 0.4 0.86 40 -7.09 0 21 6.69 Yes 8 1.07 Yes 30 0.53 Yes -29 0.43 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 11665762 - NM_032377 ELOF1 1 0.65 1.01 45 10.16 99.52 48 7.1 Yes 35 0.81 Yes 38 0.22 Yes -38 0.41 No 32 62.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 11666045 - NM_032377 ELOF1 1 0.14 0.24 15 3.75 84.95 27 5.2 No 57 0.92 Yes 0 0 No -56 0.85 Yes 14 75.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11666069 - NM_032377 ELOF1 1 3.6 5.83 72 3.97 84.41 33 6.83 Yes 33 0.93 Yes 32 0.86 Yes -32 0.88 Yes 38 87.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11666391 - NM_032377 ELOF1 1 0.33 0.5 29 8.93 85.7 34 6.07 Yes 47 0.75 No 0 0 No -33 0.93 Yes 37 96.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 11666469 - NM_032377 ELOF1 1 0.71 1.14 44 9.82 85.97 32 6.96 Yes -3 1.01 Yes 0 0 No -31 0.46 No 39 71.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 11666535 - NM_032377 ELOF1 1 0.3 0.56 27 10.35 79.5 25 6.08 Yes 12 1.42 Yes 24 0.88 Yes -24 0.9 Yes 46 94.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 43829803 - NM_001256399 ELOVL1 1 0.05 0.15 8 0.01 0 14 3.87 No 17 2.46 Yes 0 0 No -29 0.9 Yes 41 86.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43830769 - NM_001256399 ELOVL1 1 0.07 0.17 10 8.11 92.55 26 5.48 No 50 0.33 No 25 0.71 Yes -20 0.58 No 50 53.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 43830769 - NM_001256399 ELOVL1 1 0.04 0.1 7 8.11 92.55 26 5.48 No 50 0.33 No 25 0.71 Yes -20 0.58 No 50 53.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 43830932 - NM_001256399 ELOVL1 1 0.16 0.29 17 -4.66 59.95 55 10.14 Yes 42 1.74 Yes 0 0 No -31 0.83 Yes 16 83.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 53139970 - NM_001242830 ELOVL5 1 0.04 0.14 9 -3.35 0 15 4.54 No 39 0.07 No 0 0 No -42 0.74 Yes 28 83.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 53142619 - NM_001242830 ELOVL5 1 0.1 0.25 15 10.79 86.79 27 5.74 Yes 14 1.5 Yes 0 0 No -26 0.86 Yes 44 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 53152741 - NM_001242830 ELOVL5 1 0.17 0.42 24 8.3 86.35 17 5.03 No 4 1.17 Yes 31 0.5 Yes -16 0.59 No 39 47.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 53155334 - NM_001242830 ELOVL5 1 0.12 0.31 18 11.67 80.24 40 7.48 Yes 27 1.07 Yes 39 0.81 Yes -39 0.87 Yes 31 95.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 53159290 - NM_001242830 ELOVL5 1 14.45 37.53 72 9.18 93.24 46 6.93 Yes 33 1.34 Yes 23 0.78 Yes -45 0.5 No 25 66.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 110996056 - NM_001130721 ELOVL6 1 1.31 0.21 13 4.15 76.26 29 4.97 No 73 1.52 Yes 0 0 No -28 0.66 Yes 42 60.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 111014291 - NM_001130721 ELOVL6 1 0.88 0.15 10 8.62 95.8 27 6.8 Yes 5 0.81 Yes 26 0.54 Yes -26 0.92 Yes 44 83.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 33713205 + NM_001242875 ELP2 1 0.3 0.24 14 -1.11 0 27 6.47 Yes 14 1.84 Yes 0 0 No -26 0.79 Yes 44 88.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 33722249 + NM_001242875 ELP2 1 0.16 0.19 12 1.25 0 12 3.87 No 10 0.7 No 0 0 No -37 0.48 No 33 63.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 33722792 + NM_001242875 ELP2 1 0.36 0.54 30 -2.36 0 27 8.39 Yes 28 0.52 No 0 0 No -26 0.76 Yes 44 69.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 33723083 + NM_001242875 ELP2 1 0.23 0.35 21 2.82 0 37 7.48 Yes 24 1.09 Yes 0 0 No -36 0.43 No 29 71.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 33725889 + NM_001242875 ELP2 1 0.08 0.13 8 3.14 77.83 61 8.59 Yes 66 0.58 No 24 0.87 Yes -28 0.79 Yes 10 56.35 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr18 33725896 + NM_001242875 ELP2 1 0.36 0.58 27 -5.79 0 16 3.24 No 73 0.58 No 24 0.87 Yes -35 0.47 No 55 14.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 33738801 + NM_001242875 ELP2 1 0.11 0.13 8 -1.59 0 32 5.7 Yes 62 1.41 Yes 0 0 No -27 0.67 Yes 43 72.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 33739904 + NM_001242875 ELP2 1 0.34 0.49 27 -5.52 0 17 4.36 No 34 0.98 Yes 31 0.4 Yes -29 0.48 No 39 59.6 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 33739922 + NM_001242875 ELP2 1 0.11 0.18 11 -3.74 74.56 15 5.2 No 52 1 Yes 0 0 No -20 0.58 No 50 63.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 33747069 + NM_001242875 ELP2 1 0.29 0.4 21 -4.91 0 9 3.87 No 51 1.18 Yes 0 0 No -31 0.57 No 42 63.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 33747115 + NM_001242875 ELP2 1 1.4 2.17 60 3.54 79.8 27 5.89 Yes 14 0.43 No 26 0.88 Yes -26 0.49 No 48 70.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr18 33747118 + NM_001242875 ELP2 1 0.69 1.01 41 2.74 70.43 30 6.07 Yes 17 0.43 No 26 0.88 Yes -25 0.56 No 45 71.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr18 33750295 + NM_001242875 ELP2 1 0.14 0.17 11 4.26 84.41 37 6.09 Yes 28 1.61 Yes 0 0 No -36 0.9 Yes 34 91.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 27969988 + NM_001284222 ELP3 1 1.36 1.32 54 7.02 83.16 24 4.81 No 26 0.83 Yes 23 0.92 Yes -23 0.88 Yes 47 89.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 27971180 + NM_001284222 ELP3 1 0.5 0.53 29 1.1 80.04 26 5.09 No 67 1.37 Yes 25 0.93 Yes -25 0.81 Yes 45 75.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 27984473 + NM_001284222 ELP3 1 0.21 0.24 14 9.8 87.33 30 8.11 Yes 0 0.54 No 0 0 No -29 0.67 Yes 41 44.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 27995190 + NM_001284222 ELP3 1 0.13 0.18 9 -7.69 48.92 35 4.68 No -3 0.53 No 22 0.65 Yes -34 0.65 No 61 43.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 28013434 + NM_001284222 ELP3 1 0.13 0.14 10 6.68 82.69 19 5.57 Yes 44 0.95 Yes 29 0.69 Yes -34 0.22 No 36 36.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 28014469 + NM_001284222 ELP3 1 0.2 0.26 17 8.09 89.41 19 5.37 No 6 0.12 No 0 0 No -18 0.38 No 52 41.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 28017307 + NM_001284222 ELP3 1 0.28 0.25 14 7.88 79.3 29 5.57 Yes 16 0.82 Yes 0 0 No -25 0.55 No 46 61.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 28017311 + NM_001284222 ELP3 1 0.1 0.11 7 3.37 0 33 5.91 Yes 20 0.82 Yes 0 0 No -29 0.52 No 42 63.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 28040710 + NM_001284222 ELP3 1 1.55 1.47 35 9.3 82.19 28 5.57 Yes 15 0.23 No 27 0.52 Yes -24 0.34 No 46 61.45 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 31531916 + NM_019040 ELP4 1 0.71 0.53 26 10.69 94.25 32 5.27 No 72 0.98 Yes 0 0 No -27 0.73 Yes 39 68.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 31572778 + NM_019040 ELP4 1 0.28 0.38 20 5.35 82.76 23 4.79 No 10 1.22 Yes 0 0 No -22 0.9 Yes 48 89.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 31602229 + NM_019040 ELP4 1 0.19 0.24 14 2.59 0 31 12.21 Yes 18 1.03 Yes 0 0 No -30 0.48 No 40 66.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 31625311 + NM_019040 ELP4 1 16.1 16.46 72 4.61 68.33 26 7.2 Yes 21 0.5 No 25 0.81 Yes -25 0.59 No 45 61.46 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 31649785 + NM_019040 ELP4 1 0.17 0.14 9 6.93 81.59 37 5.88 Yes 52 1.07 Yes 0 0 No -30 0.92 Yes 40 91.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 31684073 + NM_019040 ELP4 1 1.02 0.82 37 6.15 80.82 41 6.68 Yes 28 1.22 Yes 0 0 No -28 0.55 No 42 76.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 31727419 + NM_019040 ELP4 1 0.15 0.13 7 8.68 86.91 35 7.96 Yes 48 1.1 Yes 0 0 No -34 0.37 No 33 49.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 31728543 + NM_019040 ELP4 1 0.13 0.1 7 5.31 77.49 84 8.45 Yes 52 0.8 Yes 0 0 No -24 0.36 No 37 56.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 31736178 + NM_019040 ELP4 1 1.38 1.15 47 6.6 82.07 36 7.11 Yes 50 -2.39 No 0 0 No -29 0.28 No 41 45.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 31741020 + NM_019040 ELP4 1 0.65 0.5 24 7.28 84.33 26 5.83 Yes -2 0.69 No 0 0 No -25 0.85 Yes 45 84.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 31784958 + NM_019040 ELP4 1 0.59 0.44 23 2.15 0 30 5.63 Yes 52 1.74 Yes 0 0 No -29 0.87 Yes 41 95.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 31801260 + NM_019040 ELP4 1 0.19 0.17 8 11.4 86.88 20 5.66 Yes 7 1.65 Yes 0 0 No -25 0.6 No 46 75.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 31802226 + NM_019040 ELP4 1 0.13 0.11 7 5.56 87.8 26 5.06 No 65 0.77 No 0 0 No -25 0.72 Yes 45 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7162868 + NM_203414 ELP5 1 0.1 0.11 7 2.18 76.62 23 4.65 No 76 -3.87 No 26 0.95 Yes -22 0.51 No 48 51.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7162893 + NM_203414 ELP5 1 0.96 1.1 49 1.17 0 31 5.83 Yes 18 1.13 Yes 0 0 No -30 0.78 Yes 44 69.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47539947 - NM_001031703 ELP6 1 0.72 0.39 20 -9.19 0 9 3.87 No 18 1.7 Yes 29 0.48 Yes -30 0.89 Yes 40 89.8 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 47539957 - NM_001031703 ELP6 1 0.65 0.4 22 7.44 82.81 21 6.56 Yes 8 1.74 Yes 29 0.48 Yes -20 0.86 Yes 50 90.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 47547513 - NM_001031703 ELP6 1 1.07 0.97 39 5.14 80.7 41 7.27 Yes 54 0.9 Yes 0 0 No -41 0.77 Yes 29 85.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47547513 - NM_001031703 ELP6 1 0.21 0.18 10 5.14 80.7 41 7.27 Yes 54 0.9 Yes 0 0 No -41 0.77 Yes 29 85.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 49707056 - NM_198449 EMB 1 1.09 1 42 1.17 0 11 4.12 No 9 0.36 No 27 0.38 Yes -33 0.63 No 43 45.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 49707147 - NM_198449 EMB 1 0.13 0.1 7 3.88 73.97 21 6.07 Yes -3 0.25 No 0 0 No -20 0.86 Yes 50 91.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 49711925 - NM_198449 EMB 1 1.77 1.39 52 7.93 91.06 21 6.77 Yes 69 0.57 No 0 0 No -20 0.83 Yes 50 69.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 19546164 - NM_001271429 EMC1 1 1.83 1.9 59 8.28 84.67 17 5.4 No 47 0.78 Yes 24 0.34 Yes -17 0.53 No 53 64.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 19547305 - NM_001271429 EMC1 1 2.15 2.25 58 6.2 81.18 19 5.39 No 42 1.02 Yes 22 0.56 Yes -22 0.84 Yes 48 84.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 19549375 - NM_001271429 EMC1 1 0.29 0.24 14 8.24 88.72 15 5.18 No 54 0.69 No 0 0 No -20 0.59 No 50 80.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 19557824 - NM_001271429 EMC1 1 0.22 0.14 9 6.36 79.74 19 4.9 No 6 1.12 Yes 0 0 No -17 0.84 Yes 52 76.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 19561744 - NM_001271429 EMC1 1 3.07 2.24 62 4.19 88.92 20 5.63 Yes 7 0.01 No 0 0 No -28 0.94 Yes 42 96.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 19563721 - NM_001271429 EMC1 1 0.69 0.63 33 2.52 0 17 4.58 No 73 -4.38 No 0 0 No -26 0.51 No 44 48.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 19565349 - NM_001271429 EMC1 1 17.7 9.38 72 7.49 88.49 34 6.01 Yes 33 1.43 Yes 30 0.9 Yes -33 0.64 No 37 75.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 19570010 - NM_001271429 EMC1 1 0.34 0.39 19 6.72 91.89 27 6.08 Yes 65 -4.41 No 0 0 No -27 0.86 Yes 43 87.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 19576336 - NM_001271429 EMC1 1 0.23 0.22 10 7.44 94.43 22 4.8 No 9 1.05 Yes 0 0 No -21 0.97 Yes 49 94.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50981721 + NM_175063 EMC10 1 0.13 0.17 10 4.03 81.41 30 4.7 No 75 -5.23 No 0 0 No -29 0.63 No 41 53.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50985069 + NM_175063 EMC10 1 5.85 0.88 38 6.96 83.04 36 6.03 Yes 56 1.18 Yes 0 0 No -30 0.7 Yes 40 80.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 109462629 + NM_001329495 EMC2 1 0.72 1.39 48 4.12 69.6 36 7.08 Yes 59 0.98 Yes 29 0.85 Yes -35 0.66 No 31 85.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 109462646 + NM_001329495 EMC2 1 0.35 0.69 29 2.22 0 25 5.06 No 76 0.99 Yes 29 0.85 Yes -24 0.76 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 109462657 + NM_001329495 EMC2 1 0.08 0.15 10 -11.77 0 36 6.04 Yes 51 0.77 No 29 0.85 Yes -35 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 109465291 + NM_001329495 EMC2 1 0.1 0.19 11 -12.06 0 34 5.82 Yes 6 1.2 Yes 0 0 No -22 0.36 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 109468380 + NM_001329495 EMC2 1 0.3 0.64 37 8.23 79.98 22 4.91 No -4 0.92 Yes 0 0 No -28 0.28 No 41 37.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 109470935 + NM_001329495 EMC2 1 0.08 0.15 10 8.56 86.94 24 7.79 Yes 11 0.81 Yes 0 0 No -23 0.96 Yes 47 96.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 109476877 + NM_001329495 EMC2 1 0.09 0.21 13 9.78 94.98 22 5.29 No 9 0.01 No 0 0 No -21 0.94 Yes 49 88.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 109479367 + NM_001329495 EMC2 1 0.16 0.35 19 9.16 90.98 22 5.84 Yes 9 0.97 Yes 0 0 No -21 0.3 No 40 34.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 109483082 + NM_001329495 EMC2 1 0.29 0.64 27 8.81 90.63 30 5.88 Yes 17 0.85 Yes 29 0.8 Yes -27 0.58 No 43 64.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 10005878 - NM_018447 EMC3 1 0.59 0.82 38 1.35 0 48 7.62 Yes 35 1.19 Yes 0 0 No -47 0.69 Yes 23 83.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 10006924 - NM_018447 EMC3 1 0.13 0.17 10 5.44 73.52 23 7.34 Yes 10 1.03 Yes 0 0 No -22 0.8 Yes 48 81.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 10013307 - NM_018447 EMC3 1 0.53 0.83 37 6.2 89.1 17 5.2 No 72 0.51 No 0 0 No -26 0.5 No 54 71.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 10023418 - NM_018447 EMC3 1 0.24 0.38 21 3.62 79.29 23 4.78 No 23 1.22 Yes 0 0 No -22 0.58 No 48 69.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 10023432 - NM_018447 EMC3 1 3.39 5.32 69 0.91 0 22 4.58 No 9 1.21 Yes 21 0.85 Yes -21 0.92 Yes 49 91.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 34520637 + NM_016454 EMC4 1 0.1 0.14 9 -3.28 0 13 4.12 No 18 0.5 No 22 0.9 Yes -30 0.85 Yes 40 81.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 34382651 - NM_020154 EMC7 1 0.04 0.11 7 -10.07 0 12 3.84 No 41 1.3 Yes 0 0 No -44 0.83 Yes 26 82.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 34388211 - NM_020154 EMC7 1 0.13 0.19 14 5.34 0 28 5.88 Yes 15 0.66 No 0 0 No -27 0.72 Yes 43 84.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 85814076 - NM_006067 EMC8 1 1.37 1.54 52 0.48 0 33 8.72 Yes 20 1.34 Yes 0 0 No -32 0.94 Yes 38 94.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85814877 - NM_006067 EMC8 1 0.1 0.13 9 -0.37 0 15 4.36 No 64 1.3 Yes 0 0 No -14 0.62 No 56 58.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24608637 - NM_016049 EMC9 1 0.39 0.22 14 -2.08 69.46 21 4.89 No 39 1.48 Yes 0 0 No -20 0.52 No 19 57.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24608999 - NM_016049 EMC9 1 30.57 10.42 72 6.98 82.76 19 4.96 No 6 0.84 Yes 18 0.71 Yes -18 0.7 Yes 52 63.59 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 24609026 - NM_016049 EMC9 1 2.54 0.83 39 5.69 80.83 33 4.78 No 28 0.02 No 24 0.6 Yes -24 0.41 No 46 58.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 24609800 - NM_016049 EMC9 1 0.27 0.1 7 3.19 84.41 21 5.74 Yes 8 1.43 Yes 0 0 No -20 0.52 No 50 76.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 153608636 + NM_000117 EMD 1 0.19 0.54 28 3.48 85.91 23 4.9 No 22 0.12 No 0 0 No -25 0.51 No 16 42.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153609081 + NM_000117 EMD 1 0.1 0.19 12 1.11 70.8 25 5.39 No 51 -4.64 No 29 0.37 Yes -24 0.83 Yes 46 56.5 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 153609085 + NM_000117 EMD 1 0.19 0.39 23 -1.09 0 29 5.74 Yes 55 -4.89 No 29 0.37 Yes -28 0.79 Yes 42 34.45 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 153609146 + NM_000117 EMD 1 0.05 0.11 7 6.35 80.16 25 6.11 Yes 36 2.19 Yes 0 0 No -24 0.58 No 46 70.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 153609268 + NM_000117 EMD 1 0.07 0.18 13 0.77 62.02 30 6 Yes 17 -1.6 No 0 0 No -51 0.55 No 19 58.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 48455960 + NM_001166131 EME1 1 2.58 0.43 24 -3.92 0 44 8.3 Yes 31 2.34 Yes 38 0.86 Yes -43 0.72 Yes 27 88.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 1825239 + NM_001257370 EME2 1 4.25 0.26 16 7.08 88.91 16 5.2 No 3 1.36 Yes 22 0.77 Yes -22 0.5 No 48 65.42 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 7080619 + NR_135131 EMG1 1 0.05 0.13 7 7.29 85.02 19 6.78 Yes 59 1.89 Yes 0 0 No -18 0.72 Yes 52 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7083680 + NR_135131 EMG1 1 0.06 0.19 8 6.62 84.26 19 5 No 6 0.88 Yes 28 0.84 Yes -18 0.78 Yes 52 72.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7084224 + NR_135131 EMG1 1 0.14 0.44 24 6.22 75.02 19 4.43 No 50 0.86 Yes 22 0.84 Yes -26 0.6 No 44 69.37 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 29603111 + NM_133455 EMID1 1 0.55 0.28 14 8.05 91.98 21 7.12 Yes 8 0.73 No 0 0 No -28 0.46 No 50 67.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29603288 + NM_133455 EMID1 1 0.38 0.18 10 5.32 84.17 25 5.36 No 64 -4.04 No 0 0 No -22 0.88 Yes 48 92.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29611200 + NM_133455 EMID1 1 0.21 0.19 11 5.49 71.89 25 5.55 No 12 1.02 Yes 0 0 No -24 0.95 Yes 46 94.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29611521 + NM_133455 EMID1 1 0.91 0.99 35 -0.26 0 9 3.87 No -4 -0.46 No 0 0 No -33 0.91 Yes 37 95.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29612311 + NM_133455 EMID1 1 7.93 0.93 38 11.12 91.12 29 4.1 No NA NA NA 0 0 No -22 0.59 No 48 71.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29612291 + NM_133455 EMID1 1 7.26 1.04 39 8.27 86.13 17 5.58 Yes 64 -3.33 No 0 0 No -25 0.77 Yes 45 74.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29612311 + NM_133455 EMID1 1 523.51 60.14 72 11.12 91.12 29 4.1 No NA NA NA 0 0 No -22 0.59 No 48 71.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29621127 + NM_133455 EMID1 1 1.17 0.14 9 2.62 0 16 3.3 No 10 1.92 Yes 0 0 No -22 0.92 Yes 48 88.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29622864 + NM_133455 EMID1 1 0.67 0.18 9 11.32 96.53 30 5.48 No 47 -1.91 No 0 0 No -29 0.62 No 41 62.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29627446 + NM_133455 EMID1 1 14.62 0.93 33 7.54 81.27 27 6.56 Yes 14 2.51 Yes 26 0.97 Yes -26 0.92 Yes 44 89.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29628555 + NM_133455 EMID1 1 0.73 0.21 13 9.16 88.8 32 5.92 Yes 31 1.38 Yes 0 0 No -31 0.78 Yes 39 79.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29630884 + NM_133455 EMID1 1 1.39 0.15 10 3.07 79.54 51 6.98 Yes 3 1.32 Yes 0 0 No -23 0.6 No 22 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 2910186 + NM_032048 EMILIN2 1 0.42 0.11 8 7.03 84.57 28 5.66 Yes 15 0.64 No 0 0 No -27 0.92 Yes 43 82.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2911055 + NM_032048 EMILIN2 1 0.51 0.14 8 6.47 84.81 18 5.54 No 5 0.81 Yes 0 0 No -24 0.41 No 46 53.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 46114663 - NM_012155 EML2 1 0.23 0.24 14 2.9 0 37 6.94 Yes 38 1.51 Yes 0 0 No -36 0.58 No 34 81.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 46122202 - NM_012155 EML2 1 1.81 1.6 52 7.64 88.76 30 5.58 Yes 69 1.53 Yes 30 0.35 Yes -29 0.36 No 41 62.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 46122956 - NM_012155 EML2 1 3.29 2.69 64 6.72 87.3 19 4.54 No 46 -2.39 No 0 0 No -19 0.52 No 52 41.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46123142 - NM_012155 EML2 1 0.87 0.72 35 6.53 86.16 28 6.59 Yes 74 0.37 No 0 0 No -28 0.82 Yes 42 69.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 46124314 - NM_012155 EML2 1 0.19 0.17 10 2.39 81.1 20 4.69 No 43 1.98 Yes 0 0 No -19 0.75 Yes 51 85.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46124327 - NM_012155 EML2 1 0.33 0.26 17 4.35 77.04 43 7.67 Yes 30 1.98 Yes 0 0 No -42 0.91 Yes 28 91.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46131623 - NM_012155 EML2 1 0.15 0.14 8 7.36 83.77 23 5.71 Yes 16 1.62 Yes 0 0 No -28 0.74 Yes 48 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46132054 - NM_012155 EML2 1 0.27 0.24 15 7.49 85.02 28 5.29 No 45 1.04 Yes 27 0.8 Yes -27 0.44 No 43 47.05 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 46133491 - NM_012155 EML2 1 0.12 0.13 7 5.68 83.84 25 7.11 Yes 44 0.46 No 0 0 No -24 0.74 Yes 46 79.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46137747 - NM_012155 EML2 1 0.12 0.13 8 3.86 79.32 104 5.61 Yes 70 -4.31 No 23 0.93 Yes -26 0.51 No 47 25.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 62371462 - NM_001300794 EML3 1 1.02 0.82 34 5.02 73.16 23 7.41 Yes 2 0.5 No 0 0 No -20 0.56 No 50 58.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62373201 - NM_001300794 EML3 1 0.23 0.22 14 5.86 79.15 36 6.21 Yes 23 0.12 No 0 0 No -35 0.93 Yes 35 87.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62374520 - NM_001300794 EML3 1 0.73 0.29 18 -6.85 69.76 32 6.54 Yes 71 1.72 Yes 36 0.75 Yes -31 0.88 Yes 39 84.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 62376299 - NM_001300794 EML3 1 0.26 0.14 7 2.61 74.18 18 4.69 No 5 -0.16 No 23 0.71 Yes -17 0.87 Yes 53 80.04 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 62376547 - NM_001300794 EML3 1 0.88 0.58 29 -0.12 68.59 27 5.47 No 14 1.51 Yes 0 0 No -26 0.71 Yes 44 86.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62376947 - NM_001300794 EML3 1 1.98 1.49 51 3.99 82.36 26 6.08 Yes 13 1.16 Yes 0 0 No -25 0.87 Yes 45 93.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62378241 - NM_001300794 EML3 1 2.98 1.94 63 5.73 83.71 46 8.23 Yes 33 1.83 Yes 0 0 No -40 0.74 Yes 25 76.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62378427 - NM_001300794 EML3 1 1.61 0.82 39 9.39 83.03 33 5.68 Yes 48 0.91 Yes 21 0.43 Yes -21 0.48 No 38 49.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 62378820 - NM_001300794 EML3 1 60.75 26.21 72 4.42 77.9 18 5.44 No 51 0.59 No 23 0.84 Yes -23 0.63 No 53 66.75 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 62379311 - NM_001300794 EML3 1 0.32 0.1 7 2.07 74.76 35 7 Yes 72 1.22 Yes 0 0 No -34 0.61 No 36 84.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 42484424 + NM_019063 EML4 1 0.21 0.19 12 8.92 79.54 31 5.92 Yes 18 1.26 Yes 0 0 No -30 0.96 Yes 40 98.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 42485585 + NM_019063 EML4 1 0.62 0.58 32 6.05 90.92 28 5.83 Yes 68 0.63 No 0 0 No -27 0.58 No 43 59.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 42492058 + NM_019063 EML4 1 1.79 2.39 58 6.27 82.75 23 5.78 Yes 10 0.98 Yes 22 0.75 Yes -28 0.5 No 48 56.43 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 42506797 + NM_019063 EML4 1 0.2 0.24 14 5.47 81.43 35 8.1 Yes 22 1.58 Yes 0 0 No -34 0.91 Yes 36 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 42507992 + NM_019063 EML4 1 0.17 0.21 14 0.92 74.35 27 6.13 Yes 19 0.96 Yes 0 0 No -27 0.76 Yes 43 88.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 42509957 + NM_019063 EML4 1 0.13 0.17 11 -2.25 0 13 7.73 Yes 0 1.62 Yes 26 0.59 Yes -25 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 42510699 + NM_019063 EML4 1 0.12 0.18 9 10.1 80.27 49 9.13 Yes 36 1.38 Yes 0 0 No -48 0.39 No 22 57.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 42513381 + NM_019063 EML4 1 0.35 0.47 27 5.41 76.45 44 6.14 Yes 62 0.4 No 29 0.49 Yes -30 0.76 Yes 40 88.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 42513462 + NM_019063 EML4 1 1.41 1.69 63 7.07 80.92 37 5.62 Yes 6 0.4 No 0 0 No -36 0.58 No 44 54.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 42532593 + NM_019063 EML4 1 0.26 0.24 11 8.77 92.95 31 6.06 Yes 1 1 Yes 0 0 No -30 0.42 No 40 70.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 42544620 + NM_019063 EML4 1 0.16 0.24 12 5.49 77.03 25 5.96 Yes 58 2.37 Yes 0 0 No -27 0.88 Yes 43 87.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 42553184 + NM_019063 EML4 1 0.99 1.39 52 9.84 85.2 44 5.4 No -1 0.9 Yes 0 0 No -22 0.66 Yes 28 28.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 42557113 + NM_019063 EML4 1 0.08 0.14 9 4.45 80.59 27 6.99 Yes 57 1.82 Yes 0 0 No -26 0.84 Yes 44 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48832688 + NM_001313905 EMP3 1 0.3 0.99 44 8.26 85.3 40 6.88 Yes 42 1.67 Yes 0 0 No -39 0.91 Yes 31 94.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 76165792 + NM_020193 EMSY 1 33.51 8.86 72 9.09 79.58 35 6 Yes 28 1.33 Yes 30 0.77 Yes -30 0.73 Yes 40 83.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 76179895 + NM_020193 EMSY 1 2.13 0.99 38 11.18 85.92 23 6.27 Yes 10 0.94 Yes 0 0 No -26 0.75 Yes 44 80.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 76238681 + NM_020193 EMSY 1 0.49 0.22 13 6.64 88.24 35 5.64 Yes 13 0.91 Yes 0 0 No -25 0.89 Yes 45 92.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 76247975 + NM_020193 EMSY 1 0.73 0.22 14 7.63 91.09 66 8.43 Yes 53 1.72 Yes 0 0 No -30 0.92 Yes 40 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 76249327 + NM_020193 EMSY 1 0.4 0.1 7 2.33 0 48 5.59 Yes 29 0.67 No 0 0 No -47 0.7 Yes 23 79.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 76253053 + NM_020193 EMSY 1 0.73 0.15 11 10.58 88.1 27 5.03 No 28 1.1 Yes 25 0.9 Yes -29 0.69 Yes 41 90.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 76253053 + NM_020193 EMSY 1 2.89 0.6 31 10.58 88.1 27 5.03 No 28 1.1 Yes 25 0.9 Yes -29 0.69 Yes 41 90.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 76253211 + NM_020193 EMSY 1 2.04 0.42 23 1.58 78.82 35 6.24 Yes 22 0.75 No 34 0.59 Yes -34 0.75 Yes 36 82.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 76253263 + NM_020193 EMSY 1 0.66 0.14 9 0.29 0 22 5.36 No 74 0.78 Yes 25 0.87 Yes -24 0.67 Yes 46 73.71 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 76256984 + NM_020193 EMSY 1 1.38 0.29 20 6.41 91.28 22 5 No 21 0.38 No 28 0.72 Yes -21 0.6 No 49 78.18 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 73151441 + NM_004097 EMX1 1 0.33 0.13 8 -6.77 0 64 9.59 Yes 51 1.5 Yes 0 0 No -63 0.69 Yes 31 9.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 73151526 + NM_004097 EMX1 1 1.79 0.19 12 10.56 82.39 33 5.05 No NA NA NA 0 0 No -21 0.78 Yes 49 65.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 73152567 + NM_004097 EMX1 1 13.94 5.85 68 5.26 85.48 19 5 No 6 0.36 No 21 0.79 Yes -21 0.79 Yes 49 76.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 73927628 - NM_001256574 ENC1 1 0.24 0.21 13 9.11 87.41 24 6.07 Yes 41 1.13 Yes 0 0 No -23 0.9 Yes 47 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94823715 + NM_015036 ENDOD1 1 0.22 0.11 8 -0.66 61.39 18 5.65 Yes 26 0.18 No 0 0 No -25 0.72 Yes 45 63.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 78397818 + NM_001164638 ENDOV 1 4.86 0.5 23 7.46 81.19 30 6 Yes NA NA NA 29 0.71 Yes -29 0.73 Yes 41 82.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 78399258 + NM_001164638 ENDOV 1 1.36 0.17 7 1.47 70.25 22 5.03 No 9 2.12 Yes 21 0.92 Yes -21 0.48 No 49 64.18 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 78401467 + NM_001164638 ENDOV 1 1.15 0.15 10 8.32 86.73 17 5.09 No 4 1.34 Yes 21 0.79 Yes -16 0.57 No 54 75.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 130589466 - NM_001114753 ENG 1 1.04 0.14 8 12.48 83.88 55 8.24 Yes 42 1.86 Yes 24 0.42 Yes -50 0.54 No 20 78.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 77073748 + NM_001042573 ENGASE 1 7.38 2.08 55 -1.37 0 34 7.04 Yes 14 0.98 Yes 0 0 No -33 0.69 Yes 37 72.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 77078810 + NM_001042573 ENGASE 1 1.14 0.18 12 -1.97 62.32 48 5.71 Yes 75 0.95 Yes 0 0 No -43 0.68 Yes 27 73.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 77081318 + NM_001042573 ENGASE 1 1.61 0.5 27 5.66 85.52 27 5.65 Yes 45 1 Yes 0 0 No -26 0.87 Yes 44 86.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8921481 - NM_001428 ENO1 1 0.01 0.51 24 -4.99 0 12 3.24 No 42 2.5 Yes 0 0 No -54 0.93 Yes 16 92.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8921513 - NM_001428 ENO1 1 0 0.17 12 2.76 0 23 5.96 Yes 10 2.18 Yes 26 0.6 Yes -22 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 8922999 - NM_001428 ENO1 1 0.01 0.22 14 -3.71 0 9 3.87 No 70 1.71 Yes 0 0 No -33 0.66 No 37 64.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 8923058 - NM_001428 ENO1 1 0.01 0.24 12 6.65 84.19 24 6.78 Yes 11 1.72 Yes 0 0 No -23 0.92 Yes 47 94.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8924053 - NM_001428 ENO1 1 0 0.13 8 1.36 71.69 10 5 No 63 -3.77 No 0 0 No -24 0.53 No 50 43.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 8924137 - NM_001428 ENO1 1 0 0.19 12 4.11 68.25 18 4.9 No 29 1.26 Yes 0 0 No -41 0.9 Yes 29 87.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8926133 - NM_001428 ENO1 1 0.01 0.6 27 4.74 84.41 30 7.15 Yes 31 0.87 Yes 0 0 No -29 0.89 Yes 41 89.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8928116 - NM_001428 ENO1 1 0.01 0.83 38 -11.61 0 23 6.54 Yes 10 1.38 Yes 0 0 No -22 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 8928637 - NM_001428 ENO1 1 0 0.1 7 3.6 69.62 30 6.06 Yes 0 0.63 No 0 0 No -29 0.95 Yes 41 95.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 8930569 - NM_001428 ENO1 1 0 0.1 7 -2.91 0 26 5.03 No 40 0.79 Yes 0 0 No -26 0.56 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 8934033 - NM_001428 ENO1 1 0 0.19 11 8.23 79.13 29 6.53 Yes 16 0.81 Yes 0 0 No -22 0.76 Yes 42 82.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8934974 - NM_001428 ENO1 1 0.65 25.82 72 -0.44 75.01 37 6.53 Yes 12 0.18 No 0 0 No -36 0.54 No 43 65.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 8936091 - NM_001428 ENO1 1 0 0.13 7 10.2 89.4 34 7.81 Yes 21 0.18 No 25 0.61 Yes -33 0.59 No 37 86.2 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 8936362 - NM_001428 ENO1 1 0 0.22 12 3.19 73.73 52 6.33 Yes 14 0.74 No 0 0 No -26 0.89 Yes 44 93.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 8936852 - NM_001428 ENO1 1 0.01 0.44 24 1.81 83.13 30 6 Yes 17 1.2 Yes 0 0 No -29 0.88 Yes 41 91.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7024599 + NM_001975 ENO2 1 0.53 0.28 12 8.09 92.96 21 5.51 No 70 -3.24 No 25 0.58 Yes -25 0.77 Yes 45 75.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7024981 + NM_001975 ENO2 1 11.32 5.21 70 5.55 75.83 39 5.95 Yes 26 1.79 Yes 30 0.9 Yes -38 0.73 Yes 32 88.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7024991 + NM_001975 ENO2 1 0.72 0.25 13 -12.85 0 13 4 No 36 1.78 Yes 0 0 No -48 0.81 Yes 22 92.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7027145 + NM_001975 ENO2 1 0.13 0.17 11 -2.3 55.07 31 7.03 Yes 58 1.63 Yes 0 0 No -30 0.61 No 43 22.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 7030659 + NM_001975 ENO2 1 0.25 0.32 17 7.52 90.6 23 5 No 10 0.76 No 22 0.95 Yes -22 0.86 Yes 48 92.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7031117 + NM_001975 ENO2 1 0.12 0.17 10 9.69 84.72 21 6.03 Yes 29 2.25 Yes 21 0.19 Yes -41 0.58 No 18 63.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 7032759 + NM_001975 ENO2 1 0.06 0.1 7 10.95 90.34 28 5.38 No NA NA NA 0 0 No -28 0.49 No 43 64.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4855319 + NM_001976 ENO3 1 9.82 1.25 52 8.17 86.46 36 6.68 Yes NA NA NA 33 0.23 Yes -33 0.66 No 37 88.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 4859251 + NM_001976 ENO3 1 1.37 0.1 7 3.04 69.76 21 4.9 No NA NA NA 0 0 No -20 0.55 No 50 18.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 677837 - NM_001126123 ENOSF1 1 0.3 0.1 7 2.11 0 22 4.56 No 61 1.94 Yes 0 0 No -21 0.52 No 49 58.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 683396 - NM_001126123 ENOSF1 1 2.04 0.88 39 3 72.86 15 5.28 No 2 2.06 Yes 21 0.87 Yes -21 0.88 Yes 49 86.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 687711 - NM_001126123 ENOSF1 1 1.21 0.43 21 10.39 89.35 37 8.24 Yes 4 1.95 Yes 0 0 No -36 0.95 Yes 34 96.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 687837 - NM_001126123 ENOSF1 1 0.38 0.14 8 5.3 78.88 36 6.05 Yes 23 0.04 No 0 0 No -30 0.45 No 40 73.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 690746 - NM_001126123 ENOSF1 1 2.46 1.21 43 5.93 82.63 27 5.81 Yes 50 -2.79 No 26 0.82 Yes -26 0.74 Yes 44 70.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 690746 - NM_001126123 ENOSF1 1 0.38 0.19 12 5.93 82.63 27 5.81 Yes 50 -2.79 No 26 0.82 Yes -26 0.74 Yes 44 70.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 691305 - NM_001126123 ENOSF1 1 1.35 0.32 19 5.81 80.69 47 5.74 Yes 10 1.1 Yes 30 0.78 Yes -22 0.68 Yes 48 67.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 693176 - NM_001126123 ENOSF1 1 3 0.78 37 4.79 92.82 35 6.68 Yes 3 1.58 Yes 34 0.87 Yes -34 0.87 Yes 36 88.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 693179 - NM_001126123 ENOSF1 1 2.45 0.58 28 5.1 75.85 32 6.5 Yes 0 1.62 Yes 34 0.87 Yes -31 0.87 Yes 39 88.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 129771379 - NM_182314 ENOX2 1 20.94 6.1 70 -1.49 0 15 3.87 No 15 0.07 No 0 0 No -27 0.72 Yes 43 81.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 120624963 - NM_006209 ENPP2 1 2.13 0.25 15 7.45 84.07 20 7.14 Yes 7 1.21 Yes 0 0 No -19 0.68 Yes 51 88.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 46111015 + NM_014936 ENPP4 1 1.95 1.47 56 7.58 89 26 5.81 Yes 13 1.71 Yes 0 0 No -29 0.55 No 41 55.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150598279 - NM_207047 ENSA 1 0.08 0.61 26 -4.85 0 16 3.87 No 20 1.65 Yes 0 0 No -32 0.84 Yes 38 82.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150599003 - NM_207047 ENSA 1 4.17 31.38 72 6.62 70.81 49 8.03 Yes 11 0.99 Yes 23 0.91 Yes -48 0.88 Yes 22 89.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150599547 - NM_207047 ENSA 1 0.06 0.43 23 8.57 87.26 19 5.2 No 52 -3.91 No 0 0 No -21 0.43 No 41 59.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 150599574 - NM_207047 ENSA 1 0.04 0.33 20 3.72 78.32 24 5.9 Yes 25 -3.49 No 0 0 No -23 0.43 No 47 55.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 97602972 + NM_001776 ENTPD1 1 0.07 0.35 19 2.02 84.19 24 4.63 No 17 1.43 Yes 0 0 No -23 0.87 Yes 47 90.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97604311 + NM_001776 ENTPD1 1 0.12 0.63 33 8.57 93.9 25 4.65 No 12 0.72 No 24 0.91 Yes -24 0.77 Yes 46 76.04 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 97605121 + NM_001776 ENTPD1 1 0.28 1.63 56 -3.33 0 11 4.12 No 13 1.3 Yes 0 0 No -25 0.72 Yes 45 60.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 97605224 + NM_001776 ENTPD1 1 3.14 17.79 72 2.9 66.55 22 5.65 Yes 9 0.31 No 0 0 No -28 0.79 Yes 42 91.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97609167 + NM_001776 ENTPD1 1 0.43 1.01 43 12.72 90.46 20 6.63 Yes 7 1.1 Yes 0 0 No -19 0.84 Yes 51 79.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97621007 + NM_001776 ENTPD1 1 0.33 1.89 55 7.87 90.3 21 6.54 Yes 8 0.68 No 0 0 No -29 0.41 No 41 50.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 97625029 + NM_001776 ENTPD1 1 0.48 2.69 54 4.75 82.06 39 6.13 Yes 57 0.78 Yes 0 0 No -27 0.88 Yes 43 88.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97625913 + NM_001776 ENTPD1 1 0.56 3.39 69 4.43 65.27 30 4.56 No 8 1.93 Yes 0 0 No -30 0.51 No 41 67.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 97626078 + NM_001776 ENTPD1 1 0.03 0.17 10 8.37 83.31 79 7.94 Yes 19 1.28 Yes 0 0 No -31 0.88 Yes 39 95.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97627238 + NM_001776 ENTPD1 1 0.04 0.26 16 5.23 84.79 29 5.33 No 23 0.07 No 0 0 No -28 0.52 No 42 40.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 97627385 + NM_001776 ENTPD1 1 0.05 0.35 20 1.64 77.14 36 7.59 Yes 41 0.59 No 0 0 No -28 0.5 No 35 60.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 97627388 + NM_001776 ENTPD1 1 0.05 0.26 16 -0.96 69.15 39 7.78 Yes 44 0.58 No 0 0 No -31 0.47 No 32 62.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 97627524 + NM_001776 ENTPD1 1 0.02 0.11 8 7.38 79.18 17 4.41 No 15 2.16 Yes 0 0 No -47 0.78 Yes 43 64.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 97630574 + NM_001776 ENTPD1 1 0.05 0.31 20 9.34 79.08 27 6.82 Yes 14 1.98 Yes 0 0 No -30 0.61 No 44 81.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 97633109 + NM_001776 ENTPD1 1 0.04 0.24 15 5.17 88.94 23 4.77 No 27 1.36 Yes 0 0 No -23 0.54 No 47 48.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 97634575 + NM_001776 ENTPD1 1 0.08 0.42 21 8.11 87.19 19 6.74 Yes 6 0.93 Yes 0 0 No -26 0.85 Yes 44 89.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97636285 + NM_001776 ENTPD1 1 0.61 3.72 62 4.37 70.91 74 6.44 Yes 61 0.13 No 0 0 No -34 0.55 No 36 76.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 23292195 - NM_004901 ENTPD4 1 31.21 7.69 72 6.85 81.34 22 5.06 No 1 0.36 No 21 0.79 Yes -21 0.93 Yes 49 86.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 23297128 - NM_004901 ENTPD4 1 0.24 0.13 7 6.23 76.89 22 5.1 No 67 -3.24 No 0 0 No -27 0.77 Yes 43 86.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 23302048 - NM_004901 ENTPD4 1 3.09 1.65 53 7.63 78.73 34 6.56 Yes 21 0.47 No 33 0.54 Yes -28 0.55 No 42 80.09 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 74432100 - NM_001321986 ENTPD5 1 1.06 0.14 9 7.46 83.13 30 7.97 Yes 1 1.04 Yes 0 0 No -26 0.67 Yes 44 72.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74435978 - NM_001321986 ENTPD5 1 1.91 0.19 11 6.74 82.93 25 6.86 Yes 12 0.8 Yes 0 0 No -24 0.77 Yes 46 65.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 74439798 - NM_001321986 ENTPD5 1 0.7 0.14 8 5.37 81.64 34 7.73 Yes 21 1.94 Yes 0 0 No -33 0.89 Yes 37 88.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74439801 - NM_001321986 ENTPD5 1 0.78 0.14 10 7.22 85.98 31 7.54 Yes 18 1.93 Yes 0 0 No -30 0.91 Yes 40 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74453849 - NM_001321986 ENTPD5 1 8.44 1.61 51 10.01 96.87 24 4.79 No 21 1.25 Yes 23 0.83 Yes -23 0.79 Yes 47 43.58 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 74453863 - NM_001321986 ENTPD5 1 0.95 0.19 12 3.69 77.46 20 4.19 No 7 1.23 Yes 23 0.83 Yes -26 0.71 Yes 51 65.55 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 25187714 + NM_001322378 ENTPD6 1 0.61 0.26 14 6.42 80.19 39 7.35 Yes 26 2.51 Yes 35 0.93 Yes -38 0.93 Yes 32 96.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 25187714 + NM_001322378 ENTPD6 1 43.98 17.04 72 6.42 80.19 39 7.35 Yes 26 2.51 Yes 35 0.93 Yes -38 0.93 Yes 32 96.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 25188692 + NM_001322378 ENTPD6 1 0.23 0.18 12 9.94 77.43 32 5.37 No 39 2.03 Yes 0 0 No -25 0.82 Yes 45 79.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 25189929 + NM_001322378 ENTPD6 1 0.14 0.1 7 3.95 85.02 24 4.99 No 73 0.85 Yes 0 0 No -23 0.68 Yes 51 71.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 25190638 + NM_001322378 ENTPD6 1 0.87 0.96 37 5.14 72.94 31 5.65 Yes 18 0.41 No 0 0 No -30 0.85 Yes 40 80.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 25192629 + NM_001322378 ENTPD6 1 0.57 0.63 28 6.21 74.42 20 5.56 Yes 7 0.87 Yes 0 0 No -19 0.81 Yes 51 90.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 25192787 + NM_001322378 ENTPD6 1 0.1 0.11 7 8.38 80.05 15 4.64 No 64 -2.27 No 0 0 No -19 0.65 No 51 51.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 25195539 + NM_001322378 ENTPD6 1 0.92 0.51 26 8.03 86.62 22 5.01 No 45 1.13 Yes 0 0 No -22 0.89 Yes 48 78.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 25197287 + NM_001322378 ENTPD6 1 0.2 0.18 13 2 0 40 9.69 Yes 27 1.76 Yes 0 0 No -39 0.69 Yes 31 87.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 25203379 + NM_001322378 ENTPD6 1 0.28 0.17 9 7.52 81.34 37 6.4 Yes -3 0.63 No 0 0 No -36 0.85 Yes 34 82.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 25203738 + NM_001322378 ENTPD6 1 0.52 0.44 29 9.84 88.87 24 4.93 No 0 0.31 No 0 0 No -24 0.85 Yes 46 70.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 25205515 + NM_001322378 ENTPD6 1 0.22 0.18 10 9.91 92.32 29 5.92 Yes 16 0.64 No 0 0 No -28 0.9 Yes 42 91.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 25205797 + NM_001322378 ENTPD6 1 23.57 18.08 72 12.71 84.94 22 6.43 Yes 61 -2.21 No 33 0.45 Yes -20 0.76 Yes 50 82.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 101420056 + NM_020354 ENTPD7 1 7.41 3.33 66 9.42 93.23 29 5.57 Yes 67 0.5 No 0 0 No -29 0.42 No 41 57.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 101439499 + NM_020354 ENTPD7 1 0.3 0.19 13 0.96 76.08 26 5.09 No 54 0.4 No 0 0 No -25 0.65 No 45 66.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 101461230 + NM_020354 ENTPD7 1 0.38 0.19 12 8.51 86.62 21 7.19 Yes 57 -1.89 No 0 0 No -20 0.4 No 50 58.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 101464221 + NM_020354 ENTPD7 1 0.79 0.44 21 2.63 77.3 16 4.69 No 61 0.8 Yes 0 0 No -53 0.33 No 36 44.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 110348361 + NR_036472 ENY2 1 0.09 0.35 20 -1.54 0 27 5.57 Yes 29 0.56 No 21 0.84 Yes -26 0.68 Yes 44 60.23 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 110354918 + NR_036472 ENY2 1 0.05 0.53 27 6.29 86.87 17 6.93 Yes 4 1.38 Yes 20 0.37 Yes -20 0.43 No 50 63.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 69030542 - NM_001278689 EOGT 1 0.71 0.15 10 1.9 77.68 23 5 No 68 1.09 Yes 0 0 No -22 0.89 Yes 48 90.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 69041024 - NM_001278689 EOGT 1 11.93 1.17 42 -2.11 57.74 30 7.75 Yes 55 1.11 Yes 0 0 No -59 0.48 No 24 64.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 69041027 - NM_001278689 EOGT 1 5.41 0.53 24 -1.43 64.08 27 7.56 Yes 52 1.11 Yes 0 0 No -26 0.55 No 27 65.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 69041409 - NM_001278689 EOGT 1 1.72 0.18 10 9.18 94.82 22 5.29 No 48 0.15 No 0 0 No -21 0.73 Yes 49 77.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 69042872 - NM_001278689 EOGT 1 2.85 0.26 13 7.22 90.36 20 5.34 No 7 0.77 No 0 0 No -24 0.72 Yes 46 79.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 69044350 - NM_001278689 EOGT 1 2.04 0.21 12 4.71 83.34 26 3.31 No -4 0.87 Yes 0 0 No -20 0.47 No 50 58.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 69049205 - NM_001278689 EOGT 1 0.76 0.13 7 5.54 78.48 23 7.06 Yes 10 1.02 Yes 0 0 No -22 0.89 Yes 48 94.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41521480 + NM_001429 EP300 1 0.19 0.25 16 6.42 83.29 77 8.73 Yes 73 -1.47 No 0 0 No -24 0.76 Yes 46 81.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 41533653 + NM_001429 EP300 1 0.13 0.19 11 -4.52 0 55 6.55 Yes -1 1.85 Yes 27 0.75 Yes -24 0.46 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 41537073 + NM_001429 EP300 1 0.11 0.17 9 2.9 74.5 28 5.45 No 42 1.21 Yes 0 0 No -27 0.76 Yes 16 76.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41555703 + NM_001429 EP300 1 0.28 0.24 15 2.59 0 32 5.89 Yes 19 0.74 No 0 0 No -32 0.41 No 39 43.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 41566091 + NM_001429 EP300 1 0.48 0.56 29 8.45 91.08 24 6.33 Yes 71 1.25 Yes 0 0 No -23 0.73 Yes 47 59.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 132448076 + NM_015409 EP400 1 6.37 1.82 59 7.44 93.82 42 5.76 Yes 5 0.29 No 35 0.47 Yes -35 0.41 No 35 42.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 132461873 + NM_015409 EP400 1 2.14 0.58 25 7.28 85.02 27 6.2 Yes 18 2.02 Yes 0 0 No -30 0.65 No 40 78.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 132464241 + NM_015409 EP400 1 127.99 34.99 72 7.69 90.61 37 6.21 Yes 13 0.85 Yes 22 0.78 Yes -25 0.93 Yes 45 89.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 132474462 + NM_015409 EP400 1 1.16 0.69 35 7.8 92.65 21 4.47 No 33 -2.52 No 0 0 No -29 0.33 No 40 43.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 132497242 + NM_015409 EP400 1 0.42 0.28 13 7.59 77.82 27 5.74 Yes 32 1.43 Yes 0 0 No -26 0.67 Yes 44 77.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132498308 + NM_015409 EP400 1 0.43 0.31 18 -12.48 0 14 3.88 No 33 -1.85 No 19 0.65 Yes -32 0.83 Yes 61 18.02 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 132500442 + NM_015409 EP400 1 0.72 0.51 31 12.19 90.55 22 5.29 No 9 0.52 No 0 0 No -21 0.82 Yes 49 91.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 132505626 + NM_015409 EP400 1 1.51 0.61 25 -0.05 70.25 38 6.48 Yes 39 -4.79 No 0 0 No -37 0.5 No 33 58.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 132514538 + NM_015409 EP400 1 1.19 0.58 32 -0.86 0 38 5.26 No 6 0.56 No 0 0 No -34 0.55 No 47 45.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 132514632 + NM_015409 EP400 1 1.55 0.72 33 4.57 69.3 23 5.15 No 25 1.19 Yes 0 0 No -29 0.62 No 41 84.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 132519627 + NM_015409 EP400 1 0.28 0.15 9 8.79 78.59 26 5.5 No 0 0.12 No 0 0 No -28 0.78 Yes 42 80.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 132527837 + NM_015409 EP400 1 0.43 0.28 14 -0.4 63.11 19 4.82 No 58 0.41 No 18 0.8 Yes -21 0.44 No 52 24.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 132529869 + NM_015409 EP400 1 0.36 0.19 14 3.5 0 9 3.87 No 73 2.47 Yes 0 0 No -25 0.75 Yes 44 82.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132547016 + NM_015409 EP400 1 1.23 0.53 27 -0.65 0 11 3.87 No 14 0.57 No 0 0 No -26 0.93 Yes 44 88.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 132551339 + NM_015409 EP400 1 41.49 12.39 72 5.81 82.53 24 5.43 No 46 0.88 Yes 0 0 No -23 0.77 Yes 47 48.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 132551345 + NM_015409 EP400 1 0.28 0.11 7 3.15 0 9 3.46 No 52 0.87 Yes 0 0 No -29 0.78 Yes 17 64.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 132554028 + NM_015409 EP400 1 0.38 0.14 9 7.27 81.3 36 6.48 Yes -3 0.54 No 20 0.82 Yes -35 0.79 Yes 35 72.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 132556716 + NM_015409 EP400 1 0.45 0.22 13 6.31 87.68 28 5.83 Yes 59 0.8 Yes 0 0 No -27 0.89 Yes 43 87.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132569929 + NR_003290 EP400NL 1 0.91 0.11 8 -4.64 0 9 3.87 No 53 0.22 No 22 0.86 Yes -31 0.34 No 39 38.69 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 132569949 + NR_003290 EP400NL 1 6.11 0.71 34 6.21 88.73 29 4.64 No 73 0.22 No 22 0.86 Yes -22 0.86 Yes 48 84.08 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 132569982 + NR_003290 EP400NL 1 1.27 0.15 9 6.66 86.88 26 6.16 Yes 13 0.67 No 0 0 No -25 0.91 Yes 45 93.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 132570919 + NR_003290 EP400NL 1 0.63 0.1 7 3.86 81.85 26 4.82 No 17 -0.6 No 0 0 No -25 0.96 Yes 45 97.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 132572964 + NR_003290 EP400NL 1 0.91 0.11 8 10.92 93.27 21 5.4 No 55 1.48 Yes 0 0 No -28 0.57 No 46 65.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 132601418 + NR_003290 EP400NL 1 36.67 1.51 59 10.8 95.83 60 7.13 Yes 47 1.83 Yes 0 0 No -23 0.66 No 47 83.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 132606972 + NR_003290 EP400NL 1 3.73 0.19 11 8.68 84.78 14 4.81 No 1 1.63 Yes 0 0 No -23 0.88 Yes 47 85.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132609639 + NR_003290 EP400NL 1 12.9 0.75 31 5.48 79.1 24 5.2 No 8 -1.63 No 0 0 No -23 0.92 Yes 47 87.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 29315254 + NM_001166006 EPB41 1 0.15 0.19 11 5.07 76.69 21 5.18 No 27 0.56 No 0 0 No -20 0.88 Yes 50 93.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 29315274 + NM_001166006 EPB41 1 0.68 0.79 40 3.38 87.69 24 5.38 No 47 0.58 No 0 0 No -23 0.58 No 47 62.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 29315529 + NM_001166006 EPB41 1 0.11 0.14 9 3.45 68.13 27 5.47 No 74 -2.11 No 0 0 No -26 0.68 Yes 44 59.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 29315867 + NM_001166006 EPB41 1 0.25 0.33 21 4.35 90.19 21 5.16 No 25 1.2 Yes 20 0.81 Yes -20 0.87 Yes 50 77.63 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 29379618 + NM_001166006 EPB41 1 14.04 13.01 72 4.15 80.16 32 6.9 Yes 19 1 Yes 0 0 No -31 0.92 Yes 39 96.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 131213440 - NM_001252660 EPB41L2 1 0.14 0.14 9 8.99 84.73 35 6.91 Yes 22 0.62 No 0 0 No -34 0.76 Yes 36 68.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 131222224 - NM_001252660 EPB41L2 1 0.06 0.11 8 5.84 87.73 34 6.75 Yes 21 1.43 Yes 0 0 No -29 0.87 Yes 41 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 120845752 + NM_001184938 EPB41L5 1 0.93 0.47 26 4.93 87.92 29 7.72 Yes 16 0.46 No 0 0 No -28 0.87 Yes 42 82.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 120845829 + NM_001184938 EPB41L5 1 0.22 0.13 7 0.92 68.18 53 6.62 Yes 35 0.72 No 0 0 No -47 0.64 No 23 70.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 32560870 - NM_001282391 EPC1 1 0.22 0.13 8 1.56 72.52 19 4.9 No 34 -3.23 No 26 0.79 Yes -25 0.29 No 51 43.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 32562011 - NM_001282391 EPC1 1 16.06 5.53 71 4.94 70.48 21 5.98 Yes 35 1.15 Yes 27 0.8 Yes -20 0.63 No 43 77.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 32562043 - NM_001282391 EPC1 1 1.71 0.58 33 9.45 90.18 26 5.06 No 3 1.16 Yes 27 0.8 Yes -28 0.94 Yes 42 94.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 32562967 - NM_001282391 EPC1 1 5.37 3.22 68 10.98 86.87 34 5.94 Yes 14 0.61 No 33 0.5 Yes -30 0.23 No 45 51.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 32576199 - NM_001282391 EPC1 1 0.23 0.19 13 -2.21 0 89 6.83 Yes 76 0.81 Yes 0 0 No -28 0.45 No 43 46.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 32582119 - NM_001282391 EPC1 1 1.32 0.92 44 -1.64 0 26 8.14 Yes 13 0.36 No 0 0 No -25 0.65 No 45 56.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 149449110 + NM_015630 EPC2 1 0.71 0.43 24 8.75 89.85 32 5.56 Yes 33 1.48 Yes 25 0.88 Yes -25 0.83 Yes 45 76.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 149449189 + NM_015630 EPC2 1 1.59 1.06 38 8.68 96.46 28 5.56 Yes 15 0.47 No 27 0.87 Yes -27 0.78 Yes 43 70.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 149493557 + NM_015630 EPC2 1 0.28 0.19 11 10.26 84.62 30 5.29 No 58 0.66 No 0 0 No -29 0.87 Yes 41 86.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 149498123 + NM_015630 EPC2 1 1.01 0.67 34 4.72 74.37 30 7.02 Yes 1 1.28 Yes 0 0 No -29 0.89 Yes 41 91.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149525590 + NM_015630 EPC2 1 0.52 0.32 18 12.8 82.76 25 6 Yes 12 1.48 Yes 0 0 No -24 0.97 Yes 46 96.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149539218 + NM_015630 EPC2 1 2.75 1.61 54 -1.29 0 12 3.87 No 8 0.58 No 0 0 No -33 0.93 Yes 37 95.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 43438698 - NM_020964 EPG5 1 0.33 0.13 8 10.1 89.58 32 5.44 No 61 1.08 Yes 0 0 No -31 0.52 No 52 45.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 43456305 - NM_020964 EPG5 1 13.37 4.14 71 4.07 83.2 28 5.83 Yes 15 1.19 Yes 0 0 No -27 0.81 Yes 43 84.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 43462397 - NM_020964 EPG5 1 4.98 1.57 59 6.15 82.64 26 6.43 Yes 13 1.49 Yes 25 0.85 Yes -25 0.75 Yes 45 72.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 43492439 - NM_020964 EPG5 1 0.43 0.19 12 2.03 64.64 39 7.06 Yes 26 1.65 Yes 21 0.92 Yes -38 0.78 Yes 32 88.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 43510748 - NM_020964 EPG5 1 0.85 0.26 14 7.36 74.55 26 5.39 No 60 1.19 Yes 0 0 No -25 0.65 No 39 61.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 134537765 + NM_004441 EPHB1 1 0.27 0.13 9 13.51 89.49 25 5.44 No 45 1.22 Yes 0 0 No -21 0.69 Yes 49 80.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 134668587 + NM_004441 EPHB1 1 0.33 0.14 8 9 92.63 31 6.52 Yes 18 0.76 No 0 0 No -30 0.75 Yes 40 79.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 134673086 + NM_004441 EPHB1 1 0.71 0.35 16 11.1 91.57 34 5.75 Yes 12 1.11 Yes 0 0 No -24 0.39 No 37 56.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 134682579 + NM_004441 EPHB1 1 0.65 0.28 16 3.88 71.95 26 6.78 Yes 13 1.88 Yes 0 0 No -25 0.85 Yes 45 86.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 134686658 + NM_004441 EPHB1 1 1.53 0.49 23 7.83 74.44 32 4.98 No -2 1.31 Yes 0 0 No -35 0.45 No 39 53.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 134696807 + NM_004441 EPHB1 1 1.19 0.44 23 10.89 89.9 31 7.07 Yes 18 1.93 Yes 30 0.8 Yes -30 0.7 Yes 40 72.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 134700667 + NM_004441 EPHB1 1 0.6 0.22 14 6.9 92.14 32 6.01 Yes 28 0.49 No 0 0 No -22 0.49 No 39 68.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 134701031 + NM_004441 EPHB1 1 1.25 0.22 12 8.92 73.8 27 7.57 Yes 14 1.66 Yes 0 0 No -26 0.81 Yes 44 95.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 134969909 + NM_004441 EPHB1 1 0.56 0.35 14 10.31 95.65 23 5.38 No 63 1 Yes 0 0 No -22 0.84 Yes 48 84.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 134977855 + NM_004441 EPHB1 1 0.84 0.38 16 -1.67 79.03 41 4.75 No 17 1.35 Yes 0 0 No -29 0.68 Yes 36 58.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 27366170 + NM_001256483 EPHX2 1 3.52 0.67 25 9.62 93.34 18 4.54 No 5 1.24 Yes 0 0 No -22 0.37 No 48 68.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 27388914 + NM_001256483 EPHX2 1 0.8 0.11 7 6.36 78.54 36 6.48 Yes 23 1.41 Yes 0 0 No -35 0.83 Yes 35 91.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 145992536 - NM_005670 EPM2A 1 21.08 2.63 59 9.62 91.26 23 4.89 No 20 0.5 No 22 0.84 Yes -22 0.88 Yes 48 91.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 145995345 - NM_005670 EPM2A 1 1.4 0.18 10 7.91 90.26 40 6.05 Yes 27 1.71 Yes 0 0 No -34 0.57 No 36 78.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 146003360 - NM_005670 EPM2A 1 0.74 0.1 7 1.1 70.13 14 4.62 No 1 1.09 Yes 0 0 No -23 0.96 Yes 47 96.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 146003796 - NM_005670 EPM2A 1 1.06 0.1 7 4.46 82.7 27 5.59 Yes 31 1.48 Yes 30 0.75 Yes -30 0.89 Yes 40 88.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 56204319 + NM_001130071 EPN1 1 65.78 46.97 72 0.08 70.39 27 5.48 No 0 1.14 Yes 23 0.96 Yes -26 0.85 Yes 44 40.33 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 19216435 + NM_001102664 EPN2 1 24.75 2.92 66 7.06 82.68 23 5 No 36 0.82 Yes 23 0.95 Yes -23 0.91 Yes 47 77.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 19216438 + NM_001102664 EPN2 1 3.51 0.35 20 5.16 82.23 26 5.27 No 39 0.82 Yes 23 0.95 Yes -26 0.9 Yes 44 65.85 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 19233926 + NM_001102664 EPN2 1 3.34 0.49 23 10.57 88.3 28 5.51 No 15 0.49 No 27 0.86 Yes -27 0.43 No 43 46.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 19234608 + NM_001102664 EPN2 1 0.95 0.14 8 4.19 76.12 61 7.31 Yes 19 1.37 Yes 0 0 No -22 0.58 No 36 70.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 220153553 - NM_004446 EPRS 1 0.11 0.25 16 4.4 82.76 15 5.48 No 51 0.49 No 0 0 No -23 0.6 No 47 58.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 220174589 - NM_004446 EPRS 1 0.11 0.46 28 0.53 0 12 4.24 No 27 0.88 Yes 0 0 No -35 0.64 No 35 67.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 220199056 - NM_004446 EPRS 1 0.07 0.31 18 7.61 81.13 26 6.77 Yes 13 0.96 Yes 0 0 No -25 0.83 Yes 45 92.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 220208355 - NM_004446 EPRS 1 0.05 0.15 11 -12.67 0 29 6.24 Yes 16 1.13 Yes 0 0 No -26 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 220214665 - NM_004446 EPRS 1 0.18 0.35 21 3.99 0 22 4.63 No 9 1.03 Yes 0 0 No -21 0.53 No 42 71.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 220214669 - NM_004446 EPRS 1 0.25 0.53 26 0.8 84.41 18 4.37 No 5 1.03 Yes 0 0 No -24 0.39 No 46 71.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 51826966 - NM_001981 EPS15 1 0.17 0.63 32 3.63 77.43 30 6.88 Yes 72 -3.13 No 0 0 No -29 0.57 No 41 85.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 51827904 - NM_001981 EPS15 1 0.12 0.39 21 7.71 88.34 26 5.65 Yes 7 1.23 Yes 0 0 No -26 0.51 No 51 56.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 51829673 - NM_001981 EPS15 1 0.06 0.22 14 2.31 88.84 19 4.86 No 37 1.19 Yes 0 0 No -22 0.75 Yes 48 69.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 51831696 - NM_001981 EPS15 1 0.03 0.11 8 2.05 0 14 3.87 No 31 1.43 Yes 0 0 No -30 0.77 Yes 27 67.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 51838105 - NM_001981 EPS15 1 0.04 0.15 8 6.17 76.26 24 6 Yes 73 0.71 No 0 0 No -23 0.37 No 47 67.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 51838562 - NM_001981 EPS15 1 0.46 1.56 52 10.19 95.56 33 5.74 Yes 20 0.21 No 0 0 No -32 0.63 No 44 80.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 51860116 - NM_001981 EPS15 1 0.06 0.28 17 -0.43 0 32 5.25 No 15 0.61 No 0 0 No -31 0.85 Yes 39 84.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 51868194 - NM_001981 EPS15 1 0.1 0.43 26 -3.08 0 92 7.19 Yes 74 0.87 Yes 0 0 No -28 0.42 No 35 54.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 51873221 - NM_001981 EPS15 1 0.28 1.25 49 9.06 96.34 29 5.39 No 16 0.2 No 0 0 No -28 0.93 Yes 42 85.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 51895240 - NM_001981 EPS15 1 0.34 1.5 51 9.03 84.15 26 6.22 Yes 2 1.15 Yes 0 0 No -28 0.81 Yes 42 85.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 51897856 - NM_001981 EPS15 1 0.05 0.18 11 5.86 87.96 31 3.67 No 4 1.34 Yes 0 0 No -26 0.63 No 40 65.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 51902843 - NM_001981 EPS15 1 0.04 0.17 9 10.16 82.17 31 6.08 Yes -4 0.37 No 0 0 No -30 0.69 Yes 40 76.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 51912526 - NM_001981 EPS15 1 0.27 1.26 51 4.17 0 17 4.54 No 74 0.4 No 0 0 No -22 0.55 No 48 41.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 51912805 - NM_001981 EPS15 1 0.04 0.14 10 5.51 89.86 23 5.18 No 17 0.75 No 23 0.53 Yes -22 0.82 Yes 48 70.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 51912939 - NM_001981 EPS15 1 0.69 2.75 63 11.7 86.04 38 7.1 Yes 25 2.47 Yes 0 0 No -37 0.51 No 33 74.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 51913929 - NM_001981 EPS15 1 0.02 0.14 7 10.28 88.03 25 7.48 Yes 66 1.98 Yes 0 0 No -24 0.82 Yes 46 88.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 51918693 - NM_001981 EPS15 1 0.06 0.31 16 6.53 83.37 43 6.08 Yes 5 0.33 No 0 0 No -23 0.77 Yes 47 72.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 51924406 - NM_001981 EPS15 1 0.54 2.47 63 7.84 88.27 28 4.61 No 34 0.44 No 27 0.94 Yes -27 0.93 Yes 43 97.77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 51924821 - NM_001981 EPS15 1 1.29 5.94 70 8.06 74.45 55 6.19 Yes 42 1.31 Yes 30 0.83 Yes -30 0.71 Yes 40 79.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 51929737 - NM_001981 EPS15 1 0.35 1.14 48 4.16 71.75 26 6.89 Yes -3 1.35 Yes 0 0 No -25 0.55 No 38 60.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 51940198 - NM_001981 EPS15 1 0.06 0.11 8 7.99 87.13 26 6 Yes 3 0.2 No 0 0 No -25 0.6 No 45 68.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 51973330 - NM_001981 EPS15 1 0.25 0.44 23 1.65 83.13 38 10.05 Yes 25 1.64 Yes 0 0 No -37 0.61 No 33 86.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 51974440 - NM_001981 EPS15 1 0.05 0.11 7 -5.67 0 42 6.07 Yes 43 0.54 No 0 0 No -41 0.93 Yes 29 97.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 51974444 - NM_001981 EPS15 1 6.46 11.63 72 4.83 83.41 38 5.8 Yes 39 0.55 No 0 0 No -37 0.92 Yes 33 97.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 16493946 - NM_001258374 EPS15L1 1 2.28 0.26 13 6.79 88.42 24 7.2 Yes 74 1.22 Yes 0 0 No -24 0.76 Yes 46 73.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16505709 - NM_001258374 EPS15L1 1 0.22 0.13 7 3.1 73.65 28 5.31 No 15 0.49 No 0 0 No -27 0.81 Yes 43 85.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 16521151 - NM_001258374 EPS15L1 1 0.22 0.18 11 11.11 85.21 26 6.81 Yes 13 1.69 Yes 0 0 No -25 0.76 Yes 45 84.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16528840 - NM_001258374 EPS15L1 1 1.67 1.43 51 3.92 84.51 23 5.32 No 31 -2.41 No 0 0 No -22 0.72 Yes 48 69.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 16528843 - NM_001258374 EPS15L1 1 0.85 0.71 34 3.22 85.66 20 5.04 No 28 -2.4 No 0 0 No -19 0.46 No 51 64.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 16538068 - NM_001258374 EPS15L1 1 0.52 0.35 18 6.43 84.99 28 5.29 No 41 0.65 No 0 0 No -27 0.78 Yes 43 56.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 16560591 - NM_001258374 EPS15L1 1 0.33 0.11 7 4.02 75.6 32 5.92 Yes 36 0.69 No 0 0 No -31 0.5 No 39 81.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 15792396 - NM_004447 EPS8 1 0.34 0.25 16 3.75 75.56 27 6.42 Yes 3 0.54 No 0 0 No -26 0.87 Yes 44 90.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 15793324 - NM_004447 EPS8 1 0.12 0.14 9 10.9 88.76 33 6.16 Yes 60 1.34 Yes 0 0 No -28 0.39 No 38 48.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 15803936 - NM_004447 EPS8 1 0.39 0.32 16 -1.91 0 30 5.51 No 7 0.48 No 0 0 No -29 0.65 No 41 60.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 15837237 - NM_004447 EPS8 1 0.28 0.14 10 6.17 97.54 24 5.29 No 11 0.76 No 23 0.92 Yes -23 0.91 Yes 47 93.09 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 726314 + NM_022772 EPS8L2 1 0.36 0.13 7 -3.36 0 14 4.24 No 17 0.72 No 0 0 No -29 0.61 No 41 33.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 727356 + NM_022772 EPS8L2 1 5.51 1.69 47 4.34 80.35 46 11 Yes 33 1.62 Yes 29 0.69 Yes -25 0.52 No 45 61.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 43471681 - NM_001002264 EPSTI1 1 0.4 0.43 22 8.55 90.88 21 6.1 Yes 30 0.68 No 0 0 No -20 0.93 Yes 50 90.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 43474518 - NM_001002264 EPSTI1 1 0.23 0.25 14 -14.35 78.52 40 7.57 Yes 9 0.3 No 0 0 No -39 0.44 No 31 63.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 43511193 - NM_001002264 EPSTI1 1 0.13 0.25 14 7.8 91.4 36 9.42 Yes 23 1.27 Yes 0 0 No -25 0.67 Yes 35 50.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 43538791 - NM_001002264 EPSTI1 1 0.2 0.24 14 7.17 79.61 28 5.56 Yes 15 1.2 Yes 0 0 No -27 0.86 Yes 43 95.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43542735 - NM_001002264 EPSTI1 1 0.69 0.89 37 11.4 94.53 22 5.78 Yes 9 0.42 No 0 0 No -24 0.68 Yes 46 73.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 43543887 - NM_001002264 EPSTI1 1 0.59 0.5 20 6.97 81.9 33 4.9 No 20 1.03 Yes 32 0.81 Yes -32 0.72 Yes 38 86.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 43550259 - NM_001002264 EPSTI1 1 0.95 0.82 24 5.28 81.98 25 4.95 No 36 1.34 Yes 0 0 No -24 0.51 No 46 73.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 43560399 - NM_001002264 EPSTI1 1 0.16 0.18 12 7.73 90.33 27 6.85 Yes 14 0.79 Yes 0 0 No -26 0.86 Yes 44 82.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43565319 - NM_001002264 EPSTI1 1 0.62 0.65 30 8.17 82.3 16 5.29 No 55 -3.84 No 22 0.72 Yes -22 0.63 No 48 60.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 27185597 + NM_005702 ERAL1 1 0.84 1.21 51 3.18 0 38 7.68 Yes 25 1.93 Yes 0 0 No -37 0.79 Yes 33 92.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27186223 + NM_005702 ERAL1 1 0.7 1.24 47 -1.04 67.99 29 5.73 Yes 16 1.44 Yes 0 0 No -28 0.65 No 42 58.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 27187440 + NM_005702 ERAL1 1 0.39 0.97 37 1.46 0 27 6.85 Yes 57 1.69 Yes 23 0.48 Yes -26 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 27187594 + NM_005702 ERAL1 1 1.1 2.71 65 7.51 83.17 25 5.89 Yes 12 1.37 Yes 24 0.88 Yes -24 0.9 Yes 46 93.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 27187658 + NM_005702 ERAL1 1 0.11 0.29 13 2.64 77.73 33 6 Yes 20 1.6 Yes 0 0 No -32 0.92 Yes 38 95.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 96117424 - NM_001198541 ERAP1 1 0.05 0.13 9 6.71 89.04 32 4.7 No 4 0.21 No 0 0 No -31 0.78 Yes 39 68.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 96117460 - NM_001198541 ERAP1 1 0.24 0.65 31 4.77 91.83 23 4.79 No 71 0.6 No 0 0 No -23 0.52 No 48 47.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 96118926 - NM_001198541 ERAP1 1 0.05 0.15 9 3.9 88.36 17 4.8 No 4 0.82 Yes 0 0 No -52 0.5 No 18 37.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 96119702 - NM_001198541 ERAP1 1 0.2 0.5 27 6.33 74.28 22 7.12 Yes 9 0.43 No 0 0 No -21 0.68 Yes 49 75.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 96119799 - NM_001198541 ERAP1 1 0.05 0.14 8 2.17 69.24 36 6.86 Yes 72 1.16 Yes 21 0.96 Yes -22 0.66 Yes 35 72.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 96124436 - NM_001198541 ERAP1 1 0.05 0.17 9 9.35 81.46 25 4.46 No 12 0.3 No 0 0 No -24 0.5 No 43 56.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 96129792 - NM_001198541 ERAP1 1 1.82 5.26 68 6.06 73.08 26 4.27 No 13 1.52 Yes 0 0 No -25 0.7 Yes 45 88.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 96216033 + NR_137637 ERAP2 1 0.21 0.17 11 4.31 90.07 23 4.28 No 38 0.6 No 0 0 No -22 0.94 Yes 48 95.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 96231365 + NR_137637 ERAP2 1 0.55 0.11 8 5.48 79.16 39 5.38 No 11 0.02 No 0 0 No -23 0.89 Yes 47 85.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 96240100 + NR_137637 ERAP2 1 0.81 0.42 24 8.36 97.38 20 7.12 Yes 30 1.13 Yes 0 0 No -25 0.7 Yes 45 74.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 96250044 + NR_137637 ERAP2 1 0.13 0.25 14 9.42 80.2 31 5.57 Yes 18 1.33 Yes 0 0 No -30 0.89 Yes 40 87.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65288644 + NM_001253699 ERBIN 1 2.01 3.38 64 7.03 89.56 17 5.26 No 4 0.29 No 0 0 No -23 0.73 Yes 47 64.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 65291034 + NM_001253699 ERBIN 1 0.39 0.76 37 7.5 88.01 61 7.43 Yes 48 0.24 No 0 0 No -21 0.74 Yes 49 58.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 65291130 + NM_001253699 ERBIN 1 0.15 0.26 18 7.86 80.99 79 8.57 Yes 48 0.74 No 0 0 No -30 0.54 No 40 54.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 65292955 + NM_001253699 ERBIN 1 0.82 1.54 51 9.62 84.98 34 8.18 Yes 21 0.96 Yes 0 0 No -33 0.9 Yes 37 95.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65307159 + NM_001253699 ERBIN 1 0.17 0.35 17 11.11 89.56 31 5.74 Yes 18 1.3 Yes 0 0 No -30 0.77 Yes 40 91.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65307884 + NM_001253699 ERBIN 1 0.63 1.22 43 -2.52 0 11 4.12 No 15 0.68 No 0 0 No -32 0.56 No 38 56.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 65310075 + NM_001253699 ERBIN 1 0.07 0.19 9 9.41 82.49 22 6.77 Yes 1 1.08 Yes 0 0 No -22 0.57 No 44 52.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 65311416 + NM_001253699 ERBIN 1 0.48 1.14 48 8.54 85.15 28 6.35 Yes 40 0.96 Yes 0 0 No -27 0.64 No 43 65.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 65314818 + NM_001253699 ERBIN 1 0.19 0.47 23 10.53 91.68 37 8.34 Yes -3 0.37 No 0 0 No -28 0.65 No 42 62.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 65317120 + NM_001253699 ERBIN 1 0.18 0.44 28 5.02 78.42 13 4.33 No 51 0.82 Yes 26 0.7 Yes -21 0.5 No 49 51.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 65320144 + NM_001253699 ERBIN 1 0.07 0.13 9 -1.22 0 16 4.3 No 58 1.38 Yes 0 0 No -37 0.55 No 33 77.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 65327169 + NM_001253699 ERBIN 1 0.19 0.38 20 6.86 90.5 33 7.25 Yes 8 1.27 Yes 0 0 No -36 0.69 Yes 34 71.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65335287 + NM_001253699 ERBIN 1 0.12 0.17 10 8.7 90.58 23 5.26 No 10 1.58 Yes 0 0 No -22 0.92 Yes 48 95.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65338206 + NM_001253699 ERBIN 1 0.15 0.19 12 8.87 93.6 34 6.14 Yes 21 1.52 Yes 0 0 No -33 0.85 Yes 37 87.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65350886 + NM_001253699 ERBIN 1 1.01 0.15 8 11.85 89.49 21 6.56 Yes 8 1.14 Yes 23 0.85 Yes -20 0.55 No 50 50.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 65351207 + NM_001253699 ERBIN 1 1.81 0.19 11 7.27 90.1 16 7.98 Yes 3 1.26 Yes 0 0 No -28 0.36 No 50 40.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 1557457 + NR_027949 ERC1 1 4.12 0.21 13 7.89 82.75 22 5.41 No 31 0.8 Yes 0 0 No -30 0.56 No 40 49.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 1579921 + NR_027949 ERC1 1 1.38 0.14 10 7.06 82.26 27 7.14 Yes 14 1.09 Yes 0 0 No -26 0.93 Yes 44 96.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 1590008 + NR_027949 ERC1 1 1.91 0.14 10 8.44 79.08 29 6.56 Yes 45 0.97 Yes 28 0.65 Yes -28 0.85 Yes 42 77.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 45920152 - NM_202001 ERCC1 1 0.74 1.15 46 1.56 0 25 5.94 Yes 12 1.52 Yes 28 0.29 Yes -24 0.85 Yes 46 89.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 45922748 - NM_202001 ERCC1 1 0.31 0.54 29 9.15 78.1 31 5.73 Yes NA NA NA 26 0.71 Yes -26 0.74 Yes 44 80.31 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 45855931 - NM_000400 ERCC2 1 0.65 0.39 21 5.64 76.74 30 5.39 No 24 -2.07 No 25 0.69 Yes -22 0.62 No 48 65.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 45857351 - NM_000400 ERCC2 1 1.53 0.81 34 1.99 82.97 26 3.73 No 62 -3.85 No 0 0 No -25 0.7 Yes 54 39.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 45862171 - NM_000400 ERCC2 1 1.24 0.76 35 7.58 81.43 67 8.27 Yes 13 0.76 No 29 0.79 Yes -29 0.72 Yes 41 77.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 45867164 - NM_000400 ERCC2 1 0.87 0.35 17 -7.26 0 14 3.87 No 11 1.39 Yes 0 0 No -23 0.81 Yes 47 69.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 45872005 - NM_000400 ERCC2 1 0.83 0.4 24 -6.62 68.07 34 5.83 Yes 21 0.3 No 22 0.46 Yes -22 0.66 No 40 62.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 128031298 - NM_001303418 ERCC3 1 0.32 0.46 26 8.79 93.31 16 4.98 No 3 0.85 Yes 0 0 No -27 0.55 No 43 31.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 128041866 - NM_001303418 ERCC3 1 0.16 0.17 10 5.93 73.91 27 4.92 No 71 -4.61 No 0 0 No -21 0.39 No 46 51.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 128047096 - NM_001303418 ERCC3 1 4.61 4.75 69 4.55 73.38 33 5.65 Yes 35 0.69 No 32 0.48 Yes -30 0.58 No 40 47.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 128050281 - NM_001303418 ERCC3 1 1.4 1.96 60 7.06 84.45 23 6.32 Yes 10 1.85 Yes 22 0.96 Yes -22 0.88 Yes 48 85.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 128050985 - NM_001303418 ERCC3 1 0.09 0.14 10 1.56 69.17 23 4.8 No 39 -2.53 No 0 0 No -22 0.9 Yes 48 86.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 14018386 + NM_005236 ERCC4 1 0.35 0.17 9 5.59 90.3 24 4.72 No 7 0.66 No 0 0 No -23 0.84 Yes 47 90.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 14020010 + NM_005236 ERCC4 1 2.52 1.17 49 8.92 91.2 18 7.52 Yes 5 1.36 Yes 0 0 No -20 0.83 Yes 50 74.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14022400 + NM_005236 ERCC4 1 0.31 0.17 11 5.58 85.72 42 6.69 Yes 29 1.07 Yes 0 0 No -21 0.67 Yes 49 33.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 50678957 - NM_000124 ERCC6 1 1.29 0.31 17 -5.59 0 13 3.87 No 73 0.53 No 23 0.65 Yes -25 0.39 No 57 23.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 50691488 - NM_000124 ERCC6 1 1.75 0.22 15 6 83.97 67 8.13 Yes 11 0.78 Yes 0 0 No -23 0.76 Yes 40 58.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 50725168 - NM_000124 ERCC6 1 92.73 10.68 72 10.12 84.16 24 5.82 Yes 8 1.12 Yes 0 0 No -23 0.92 Yes 47 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50725168 - NM_000124 ERCC6 1 3.84 0.51 27 10.12 84.16 24 5.82 Yes 8 1.12 Yes 0 0 No -23 0.92 Yes 47 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50733273 - NM_000124 ERCC6 1 3.92 0.97 38 13.47 92.08 24 5.91 Yes 11 1.75 Yes 0 0 No -23 0.8 Yes 47 93.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50741021 - NM_000124 ERCC6 1 23.68 3.96 66 0.87 0 37 5.6 Yes 9 0.21 No 0 0 No -24 0.92 Yes 46 91.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 71452632 - NM_017669 ERCC6L 1 0.4 0.11 8 4.84 75.98 29 5.39 No 29 0.83 Yes 0 0 No -28 0.85 Yes 42 80.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 71457799 - NM_017669 ERCC6L 1 7.3 1.47 52 2.55 0 32 5.85 Yes 19 0.59 No 25 0.75 Yes -25 0.8 Yes 45 58.12 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 98644555 + NM_001010895 ERCC6L2 1 2.55 0.89 31 5.52 80.66 45 6.08 Yes 32 0.86 Yes 0 0 No -25 0.94 Yes 45 94.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 98669404 + NM_001010895 ERCC6L2 1 2.52 0.88 40 1.61 69.91 37 6.37 Yes 24 0.58 No 0 0 No -37 0.75 Yes 33 69.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 98669951 + NM_001010895 ERCC6L2 1 0.81 0.29 19 5.56 79.25 26 6.48 Yes 63 1.14 Yes 0 0 No -25 0.67 Yes 45 69.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 98685490 + NM_001010895 ERCC6L2 1 0.88 0.24 12 6.72 88.72 39 6.48 Yes 40 0.73 No 0 0 No -23 0.79 Yes 47 84.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 98685571 + NM_001010895 ERCC6L2 1 1.6 0.47 22 0.94 70.07 22 4.67 No 55 0.57 No 0 0 No -21 0.9 Yes 49 40.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 98704335 + NM_001010895 ERCC6L2 1 0.57 0.24 14 5.58 84.37 40 7.4 Yes 4 1.94 Yes 0 0 No -33 0.82 Yes 37 87.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 98717009 + NM_001010895 ERCC6L2 1 1.36 0.53 29 9.37 82.26 25 5.45 No 73 1.34 Yes 24 0.76 Yes -24 0.96 Yes 46 96.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 60186229 - NM_001007233 ERCC8 1 1.87 0.85 34 8.2 88.98 37 6.54 Yes 24 0.28 No 0 0 No -37 0.55 No 33 71.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 60189471 - NM_001007233 ERCC8 1 4.45 1.75 54 12.16 87.77 16 5.66 Yes 3 0.6 No 25 0.37 Yes -25 0.49 No 40 68.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 60192343 - NM_001007233 ERCC8 1 2.49 0.86 32 8.15 82.08 23 5.74 Yes 10 1.53 Yes 0 0 No -22 0.64 No 48 78.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 60205785 - NM_001007233 ERCC8 1 2.95 1.31 53 10.27 88.27 28 5.48 No 34 0.82 Yes 0 0 No -35 0.39 No 35 64.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 60226382 - NM_001007233 ERCC8 1 0.39 0.14 9 9.2 87.82 33 5.66 Yes 20 1.13 Yes 0 0 No -25 0.68 Yes 38 75.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 60227976 - NM_001007233 ERCC8 1 2.2 0.78 38 8.31 77.33 15 4.26 No 2 0.6 No 20 0.42 Yes -20 0.48 No 50 86.7 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 42753136 - NM_001312656 ERF 1 0.31 0.35 17 7.6 70.75 32 8.31 Yes 19 0.74 No 0 0 No -31 0.95 Yes 39 95.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 42753811 - NM_001312656 ERF 1 1.17 1.26 50 1.21 68.69 33 5.72 Yes 1 0.21 No 28 0.5 Yes -36 0.54 No 34 68.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 42753882 - NM_001312656 ERF 1 0.15 0.18 10 -4.22 0 12 4.24 No 18 1.34 Yes 0 0 No -30 0.93 Yes 40 94.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 172283093 + NM_001031711 ERGIC1 1 0.69 0.72 35 6.29 88.58 25 5.16 No 49 0.15 No 0 0 No -20 0.82 Yes 50 91.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 172306394 + NM_001031711 ERGIC1 1 0.13 0.14 9 7.41 76.61 31 5.99 Yes -4 0.65 No 0 0 No -30 0.65 No 40 51.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 172324838 + NM_001031711 ERGIC1 1 0.28 0.69 33 9.55 89.77 21 6.93 Yes 8 2.41 Yes 20 0.95 Yes -20 0.83 Yes 50 86.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 172327903 + NM_001031711 ERGIC1 1 0.07 0.18 10 8.95 75.7 31 4.69 No 12 2.08 Yes 0 0 No -24 0.72 Yes 46 57.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 172337547 + NM_001031711 ERGIC1 1 0.05 0.14 9 3.97 84.41 34 4.97 No 55 1.13 Yes 0 0 No -29 0.36 No 41 71.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 172338141 + NM_001031711 ERGIC1 1 0.17 0.39 23 9.19 84.12 21 6.56 Yes NA NA NA 0 0 No -36 0.87 Yes 34 91.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 172338582 + NM_001031711 ERGIC1 1 0.05 0.14 9 8.3 89.66 16 4.34 No 65 1.12 Yes 0 0 No -26 0.74 Yes 44 68.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 172339415 + NM_001031711 ERGIC1 1 0.04 0.1 7 2.15 0 29 6.64 Yes 46 0.75 No 0 0 No -28 0.57 No 41 46.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 172342520 + NM_001031711 ERGIC1 1 0.18 0.49 23 9.69 91.2 20 5.44 No 7 1.02 Yes 26 0.83 Yes -26 0.78 Yes 44 66.92 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 172347366 + NM_001031711 ERGIC1 1 0.18 0.53 27 9.22 83.27 36 6.47 Yes 23 0.79 Yes 24 0.68 Yes -35 0.74 Yes 35 70.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 172349090 + NM_001031711 ERGIC1 1 0.09 0.28 16 9.13 80.88 32 5.65 Yes -2 1.29 Yes 0 0 No -24 0.54 No 52 50.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 172352845 + NM_001031711 ERGIC1 1 0.09 0.26 14 9.97 83.01 27 5.48 No 42 0.48 No 0 0 No -26 0.92 Yes 44 91.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 172353714 + NM_001031711 ERGIC1 1 0.43 1.22 49 8.34 81.61 18 6 Yes 5 1.62 Yes 29 0.29 Yes -17 0.89 Yes 53 90.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 172361735 + NM_001031711 ERGIC1 1 0.06 0.15 8 11.24 88.1 21 6.22 Yes 65 1.29 Yes 0 0 No -20 0.82 Yes 50 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 172366458 + NM_001031711 ERGIC1 1 0.04 0.11 7 7.71 84.49 26 5.56 Yes 76 -4.2 No 0 0 No -25 0.46 No 45 41.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 172373296 + NM_001031711 ERGIC1 1 0.06 0.15 9 7.97 90.33 33 5.71 Yes 20 0.21 No 0 0 No -26 0.88 Yes 44 85.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 172374364 + NM_001031711 ERGIC1 1 0.05 0.15 10 7.04 86.87 20 5.92 Yes 55 0.94 Yes 0 0 No -28 0.54 No 42 77.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 29494695 - NM_016570 ERGIC2 1 1.41 1.89 55 6.66 85.24 18 5.42 No 5 0.43 No 29 0.66 Yes -29 0.88 Yes 41 92.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 29498444 - NM_016570 ERGIC2 1 0.36 1.03 49 5.77 86.42 28 4.96 No 48 0.3 No 0 0 No -28 0.51 No 48 44.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 29498491 - NM_016570 ERGIC2 1 0.05 0.15 9 -1.93 52.82 14 6 Yes 49 0.31 No 29 0.33 Yes -32 0.42 No 38 28.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 29514595 - NM_016570 ERGIC2 1 0.07 0.15 9 6.46 85.37 15 5.02 No 2 0.47 No 0 0 No -26 0.73 Yes 44 68.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 29531291 - NM_016570 ERGIC2 1 0.4 0.4 23 5.95 88.02 28 5.18 No 76 -4.69 No 0 0 No -28 0.46 No 47 49.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 34130534 + NM_198398 ERGIC3 1 0.08 0.38 20 9.33 79.61 19 6.57 Yes 57 1.14 Yes 25 0.58 Yes -25 0.33 No 45 47.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 34131406 + NM_198398 ERGIC3 1 0.56 2.19 63 7.54 83.91 15 4.59 No 37 0.31 No 23 0.39 Yes -23 0.24 No 53 39.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 34131409 + NM_198398 ERGIC3 1 1.01 3.92 65 6.04 84.66 18 4.82 No 40 0.32 No 23 0.39 Yes -20 0.5 No 50 55.48 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 34135132 + NM_198398 ERGIC3 1 0.04 0.13 8 7.92 76.4 18 4.72 No 57 0.94 Yes 27 0.91 Yes -26 0.48 No 53 47.13 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 34144367 + NM_198398 ERGIC3 1 0.08 0.19 11 5.48 74.14 30 4.37 No 55 1.48 Yes 26 0.28 Yes -30 0.53 No 45 48.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 34144647 + NM_198398 ERGIC3 1 0.12 0.35 19 -0.88 67.81 39 6.48 Yes -1 -0.08 No 32 0.34 Yes -35 0.57 No 35 69.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr20 34144725 + NM_198398 ERGIC3 1 0.65 1.93 59 -3.66 0 14 3.26 No 29 0.45 No 19 0.66 Yes -19 0.72 Yes 51 66.27 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 34144761 + NM_198398 ERGIC3 1 0.31 0.89 38 -10.17 0 13 4.36 No 65 0.46 No 0 0 No -12 0.52 No 32 26.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 34145231 + NM_198398 ERGIC3 1 0.08 0.33 19 3.08 76.51 26 6.66 Yes 1 1.4 Yes 0 0 No -25 0.94 Yes 45 91.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69847357 - NM_004450 ERH 1 0.03 0.71 36 -10.26 0 30 6.32 Yes 17 1.64 Yes 0 0 No -29 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69847551 - NM_004450 ERH 1 0.01 0.11 8 6.21 78.42 24 4.3 No 15 1.07 Yes 0 0 No -27 0.73 Yes 43 81.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69856080 - NM_004450 ERH 1 0.01 0.21 11 7.18 80.79 32 6.85 Yes -2 0.49 No 0 0 No -35 0.55 No 42 62.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69861628 - NM_004450 ERH 1 0.01 0.1 7 -23.91 0 30 4.86 No 6 0.29 No 0 0 No -29 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69862009 - NM_004450 ERH 1 0.01 0.13 9 8.83 85.05 24 4.58 No 11 1.48 Yes 0 0 No -23 0.89 Yes 47 88.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69863272 - NM_004450 ERH 1 0.01 0.14 10 5.02 89.4 15 6.29 Yes 2 1.3 Yes 0 0 No -30 0.58 No 40 53.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69863526 - NM_004450 ERH 1 0.03 0.35 19 0.21 70.92 41 6.56 Yes 28 0.74 No 0 0 No -40 0.82 Yes 30 86.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69864078 - NM_004450 ERH 1 0.17 2.42 61 -4.63 74.03 31 7.31 Yes 37 1.54 Yes 0 0 No -30 0.94 Yes 40 96.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69864150 - NM_004450 ERH 1 0.07 1 37 2.48 0 11 4.12 No 47 1.06 Yes 0 0 No -59 0.6 No 11 62.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69864469 - NM_004450 ERH 1 0.04 0.6 27 4.53 93.46 19 7.07 Yes 6 1.19 Yes 0 0 No -18 0.57 No 52 75.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69864472 - NM_004450 ERH 1 0.07 0.94 38 5.42 86.44 16 6.86 Yes 3 1.23 Yes 0 0 No -28 0.32 No 55 51.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 8861583 + NM_153332 ERI1 1 0.58 0.33 22 10.32 87.67 28 5.48 No 15 1.25 Yes 27 0.97 Yes -27 0.94 Yes 43 97.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 8866541 + NM_153332 ERI1 1 1.07 0.81 37 5.57 84.69 34 7.14 Yes 21 1.49 Yes 33 0.8 Yes -33 0.85 Yes 37 89.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 8866595 + NM_153332 ERI1 1 0.17 0.11 8 10 94.23 20 5 No 75 1.47 Yes 0 0 No -23 0.66 No 47 81.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 8870551 + NM_153332 ERI1 1 1.18 1.29 45 10.31 84.22 32 10.54 Yes 19 1.8 Yes 0 0 No -31 0.68 Yes 39 72.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 8890058 + NM_153332 ERI1 1 0.34 0.47 23 8.64 80.39 29 4.44 No 35 1.13 Yes 28 0.74 Yes -22 0.45 No 48 63.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 20811637 - NM_080663 ERI2 1 1.83 0.63 34 4.07 75.19 36 7.05 Yes 23 0.58 No 0 0 No -35 0.65 No 35 63.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 20814834 - NM_080663 ERI2 1 11.2 4.97 69 -2.39 0 35 5.47 No 4 0.38 No 25 0.64 Yes -30 0.52 No 40 70.47 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 20815981 - NM_080663 ERI2 1 2.42 0.33 15 2.44 0 54 6.99 Yes 41 1.63 Yes 0 0 No -33 0.85 Yes 37 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 44770494 - NM_024066 ERI3 1 0.08 0.1 7 8.2 88.1 66 8.79 Yes 53 1.21 Yes 0 0 No -20 0.69 Yes 50 69.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 44788523 - NM_024066 ERI3 1 0.15 0.17 10 6.63 89.59 31 6.46 Yes 59 1.35 Yes 0 0 No -30 0.81 Yes 40 72.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 44801644 - NM_024066 ERI3 1 0.47 0.53 29 7.46 81.83 25 6.32 Yes 74 1.1 Yes 0 0 No -24 0.36 No 48 55.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 44804916 - NM_024066 ERI3 1 0.41 0.15 10 5.03 82.72 25 6.08 Yes 63 -2.8 No 0 0 No -30 0.71 Yes 46 67.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 44804989 - NM_024066 ERI3 1 3.8 1.39 52 4.66 0 9 3.87 No 70 2.54 Yes 18 0.07 Yes -49 0.03 No 25 3.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 618783 - NM_001303100 ERICH1 1 6.66 3.46 68 1.25 0 17 4.36 No 59 0.12 No 0 0 No -16 0.66 No 49 75.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 622205 - NM_001303100 ERICH1 1 5.18 2.74 65 3.38 68.22 30 6.26 Yes 17 0.97 Yes 33 0.75 Yes -33 0.83 Yes 37 90.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 622682 - NM_001303100 ERICH1 1 0.3 0.14 8 6.07 81.85 27 6.8 Yes 14 0.13 No 0 0 No -26 0.94 Yes 44 97.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 641097 - NM_001303100 ERICH1 1 11.51 7.32 72 -1.8 60.87 36 7.42 Yes 23 1.64 Yes 35 0.89 Yes -35 0.92 Yes 35 96.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 642314 - NM_001303100 ERICH1 1 2.83 1.76 44 8.64 84.41 34 5.87 Yes 65 0.61 No 0 0 No -24 0.42 No 46 68.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 647238 - NM_001303100 ERICH1 1 0.15 0.11 7 6.77 71.21 37 6.56 Yes 24 0.37 No 0 0 No -36 0.9 Yes 34 91.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 647459 - NM_001303100 ERICH1 1 0.17 0.15 8 3.33 67.39 31 5.65 Yes 18 0.9 Yes 0 0 No -30 0.83 Yes 40 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 658117 - NM_001303100 ERICH1 1 2.23 1.86 52 11.5 87.82 28 7.32 Yes 15 2.43 Yes 0 0 No -27 0.64 No 43 92.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 665351 - NM_001303100 ERICH1 1 0.72 0.6 24 6.92 85.42 18 4.68 No 5 0.06 No 0 0 No -20 0.75 Yes 50 80.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 665393 - NM_001303100 ERICH1 1 0.18 0.15 8 4.55 84.59 19 4.93 No 61 0.65 No 0 0 No -18 0.65 No 52 59.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 665439 - NM_001303100 ERICH1 1 2.38 1.86 56 7.29 79.57 28 5.83 Yes 15 0.65 No 0 0 No -27 0.91 Yes 43 91.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 667565 - NM_001303100 ERICH1 1 0.37 0.14 10 6.27 77.31 33 6.57 Yes 20 0.44 No 0 0 No -32 0.75 Yes 38 85.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 675921 - NM_001303100 ERICH1 1 0.42 0.17 11 8.71 81.06 10 5.91 Yes 60 1 Yes 0 0 No -21 0.62 No 49 84.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 99077504 + NM_173549 ERICH5 1 0.38 0.1 7 6.65 72.35 37 5.98 Yes 1 0.65 No 0 0 No -36 0.43 No 34 48.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 150430052 + NR_121674 ERICH6-AS1 1 3.54 0.19 12 7.11 86.3 29 5.74 Yes 27 0.79 Yes 0 0 No -29 0.87 Yes 41 88.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 150437659 + NR_121674 ERICH6-AS1 1 6.05 0.33 20 -3.42 0 105 9.22 Yes 13 1.41 Yes 0 0 No -25 0.94 Yes 45 91.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 54015719 + NM_015701 ERLEC1 1 0.21 0.33 19 9.73 88.27 21 7.21 Yes 8 1.43 Yes 20 0.8 Yes -20 0.85 Yes 50 92.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 54022316 + NM_015701 ERLEC1 1 0.34 0.69 32 6.55 79.56 65 5.67 Yes 12 1.72 Yes 0 0 No -24 0.78 Yes 46 88.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 54028855 + NM_015701 ERLEC1 1 0.16 0.36 19 -3.45 0 12 3.87 No 16 1.11 Yes 0 0 No -29 0.55 No 42 58.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 54043151 + NM_015701 ERLEC1 1 0.21 0.32 17 8.13 86.46 29 10.11 Yes 71 1.67 Yes 0 0 No -28 0.96 Yes 42 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101918813 - NM_001347857 ERLIN1 1 1.04 0.6 31 10.53 83.12 64 6.87 Yes 14 0.27 No 0 0 No -26 0.61 No 44 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 101935880 - NM_001347857 ERLIN1 1 0.21 0.11 7 4.74 69.49 70 8.24 Yes 13 1.92 Yes 0 0 No -25 0.65 No 25 61.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 37597792 + NM_007175 ERLIN2 1 0.23 0.19 12 7.87 85.84 23 6.23 Yes 10 0.51 No 0 0 No -22 0.85 Yes 48 74.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 37597884 + NM_007175 ERLIN2 1 0.19 0.17 9 1.41 75.81 34 6.24 Yes 43 1.24 Yes 0 0 No -33 0.55 No 37 61.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 37601659 + NM_007175 ERLIN2 1 0.21 0.13 8 7.6 82.67 17 5.33 No 4 0.95 Yes 0 0 No -25 0.46 No 45 57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 170154002 + NM_001278531 ERMARD 1 1.16 0.13 8 9.89 87.37 38 5.23 No 63 0.69 No 27 0.77 Yes -37 0.55 No 48 63.75 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 170154039 + NM_001278531 ERMARD 1 2.82 0.28 15 3.39 74.64 32 4.3 No 47 0.3 No 27 0.77 Yes -27 0.7 Yes 44 50.01 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 170155464 + NM_001278531 ERMARD 1 0.37 0.14 8 4.12 74.66 23 6.4 Yes 10 0.98 Yes 0 0 No -22 0.89 Yes 48 93.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170155383 + NM_001278531 ERMARD 1 6.6 2.21 58 -0.36 0 30 7 Yes 17 1.16 Yes 24 0.83 Yes -28 0.73 Yes 41 80.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 170156492 + NM_001278531 ERMARD 1 3.83 1.53 53 6.99 78.54 22 5.43 No 69 1.11 Yes 0 0 No -22 0.83 Yes 48 85.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170162888 + NM_001278531 ERMARD 1 0.51 0.4 18 8.11 80.58 17 5.29 No 55 0.8 Yes 0 0 No -24 0.52 No 46 60.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 170164916 + NM_001278531 ERMARD 1 0.15 0.1 7 10.64 84.53 21 6.5 Yes 8 1 Yes 0 0 No -20 0.7 Yes 50 79.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170169775 + NM_001278531 ERMARD 1 0.24 0.14 8 5.81 76.05 38 6.4 Yes 25 1.08 Yes 0 0 No -37 0.9 Yes 33 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170176040 + NM_001278531 ERMARD 1 1.08 0.46 24 2.47 0 36 5 No 66 0.67 No 0 0 No -35 0.56 No 35 76.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 5791283 - NM_024896 ERMP1 1 3.61 1.47 51 7.79 91.51 15 5.22 No 2 1.43 Yes 22 0.89 Yes -22 0.93 Yes 48 91.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 5810145 - NM_024896 ERMP1 1 0.45 0.17 12 8.45 79.92 29 5.5 No 4 0.66 No 0 0 No -28 0.88 Yes 42 92.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 62130333 - NM_001433 ERN1 1 0.79 0.19 12 1.61 0 10 4 No 73 1.22 Yes 0 0 No -26 0.91 Yes 44 96.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 62135722 - NM_001433 ERN1 1 0.67 0.14 9 3.97 83.95 25 9.01 Yes 12 0.09 No 0 0 No -24 0.5 No 42 51.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 62152406 - NM_001433 ERN1 1 0.34 0.13 8 9.16 81.68 41 7.03 Yes 28 1.4 Yes 0 0 No -28 0.62 No 42 82.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 62180165 - NM_001433 ERN1 1 3.38 0.4 22 11.31 94.98 22 5.92 Yes 63 -4.47 No 0 0 No -28 0.8 Yes 42 78.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 62180854 - NM_001433 ERN1 1 0.78 0.1 7 4.74 84.41 29 7.35 Yes 16 1.5 Yes 0 0 No -28 0.73 Yes 42 86.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 62199278 - NM_001433 ERN1 1 1.64 0.21 13 9.04 83.56 25 5.05 No 38 0.62 No 0 0 No -24 0.65 No 46 68.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 53113177 - NM_014584 ERO1A 1 0.07 0.18 11 -8.83 79.45 30 6.72 Yes 3 0.36 No 0 0 No -35 0.45 No 35 62.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 53119911 - NM_014584 ERO1A 1 0.18 0.43 23 6.46 79.2 29 4.06 No 76 -4.02 No 0 0 No -28 0.87 Yes 42 89.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 53119911 - NM_014584 ERO1A 1 0.08 0.21 13 6.46 79.2 29 4.06 No 76 -4.02 No 0 0 No -28 0.87 Yes 42 89.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 53120032 - NM_014584 ERO1A 1 0.12 0.38 21 -0.38 79.2 28 5.17 No 15 0.75 No 0 0 No -27 0.81 Yes 43 85.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 53124716 - NM_014584 ERO1A 1 0.05 0.14 9 4.43 0 15 4.58 No 19 1.18 Yes 0 0 No -31 0.73 Yes 39 70.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 53130315 - NM_014584 ERO1A 1 0.05 0.1 7 3.97 84.41 27 5.47 No 14 0.45 No 0 0 No -30 0.39 No 40 68.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 53145879 - NM_014584 ERO1A 1 0.21 0.57 29 4.27 83.76 14 5.1 No 44 -2.68 No 0 0 No -30 0.29 No 40 36.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 236392114 - NM_019891 ERO1B 1 1 0.4 21 3.13 84.53 19 4.67 No 43 0.89 Yes 0 0 No -19 0.7 Yes 51 71.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236392129 - NM_019891 ERO1B 1 0.24 0.13 8 1.26 65.87 17 5.47 No 28 0.88 Yes 0 0 No -23 0.62 No 47 47.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 236397603 - NM_019891 ERO1B 1 1.6 0.61 32 5.18 73.29 25 5.56 Yes 67 0.37 No 0 0 No -24 0.81 Yes 46 86.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 236405361 - NM_019891 ERO1B 1 0.24 0.26 14 3.01 0 28 6.38 Yes 15 1.44 Yes 0 0 No -27 0.93 Yes 43 93.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236406210 - NM_019891 ERO1B 1 4.23 4.08 66 6.3 81.25 18 5.74 Yes 5 1.48 Yes 0 0 No -17 0.54 No 53 81.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 236410803 - NM_019891 ERO1B 1 0.65 0.51 24 2.94 74.83 25 4.61 No 69 -5.12 No 0 0 No -22 0.5 No 46 37.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 236416644 - NM_019891 ERO1B 1 0.3 0.24 14 8.2 96.54 19 5.57 Yes 6 1.5 Yes 0 0 No -21 0.51 No 49 50.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 236425680 - NM_019891 ERO1B 1 2.23 1.21 41 1.48 0 18 4.58 No 41 0.17 No 0 0 No -17 0.74 Yes 53 47.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 236431737 - NM_019891 ERO1B 1 1.06 0.5 28 10.89 87.15 23 4.41 No 15 1.04 Yes 0 0 No -27 0.57 No 43 65.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 236431778 - NM_019891 ERO1B 1 0.63 0.33 20 11.99 92.08 42 7.63 Yes 29 0.93 Yes 0 0 No -41 0.55 No 41 60.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 236444412 - NM_019891 ERO1B 1 0.86 0.36 20 5.4 89.45 24 5.38 No 11 0.52 No 0 0 No -23 0.94 Yes 47 94.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112452394 + NM_006817 ERP29 1 0.18 0.97 37 11.08 90.3 36 5.8 Yes 57 -1.7 No 32 0.47 Yes -31 0.69 Yes 38 66.93 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 112457486 + NM_006817 ERP29 1 0.07 0.33 19 8.61 90.25 49 7.27 Yes 36 0.1 No 18 0.16 Yes -37 0.46 No 52 67.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 112459732 + NM_006817 ERP29 1 0.02 0.13 7 7.06 88.04 23 5.1 No 76 -4.2 No 0 0 No -22 0.89 Yes 48 89.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112459732 + NM_006817 ERP29 1 0.04 0.19 11 7.06 88.04 23 5.1 No 76 -4.2 No 0 0 No -22 0.89 Yes 48 89.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 102744992 - NM_015051 ERP44 1 0.05 0.25 16 -3.18 0 31 7.5 Yes 52 -2.92 No 0 0 No -31 0.54 No 39 55.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 102752058 - NM_015051 ERP44 1 0.03 0.15 10 9.22 85.03 14 4.8 No 1 0.48 No 0 0 No -25 0.73 Yes 45 73.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 102762526 - NM_015051 ERP44 1 0.03 0.17 8 7.06 94.65 29 5.57 Yes 34 1.11 Yes 0 0 No -26 0.53 No 19 44.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 102762550 - NM_015051 ERP44 1 0.03 0.14 8 7.72 85.96 23 7.35 Yes 10 1.12 Yes 0 0 No -22 0.6 No 43 69.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 102769330 - NM_015051 ERP44 1 0.04 0.17 12 6.68 88.26 17 5.19 No 4 0.11 No 0 0 No -20 0.65 No 50 67.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 102784500 - NM_015051 ERP44 1 0.03 0.17 11 -1.41 0 12 4.24 No 37 0.77 Yes 0 0 No -33 0.35 No 41 44.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 102787589 - NM_015051 ERP44 1 0.08 0.42 20 7.53 91.35 37 6.97 Yes 24 0.89 Yes 0 0 No -36 0.88 Yes 34 89.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 102812564 - NM_015051 ERP44 1 0.05 0.25 17 8.23 84.69 39 7.35 Yes 63 0.67 No 0 0 No -27 0.75 Yes 43 91.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 102816450 - NM_015051 ERP44 1 0.37 1.42 50 7.44 76.93 25 4.97 No 40 0.48 No 0 0 No -22 0.46 No 46 39.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 64465573 - NM_001007253 ERV3-1 1 5.01 0.64 30 0.2 0 19 4.35 No 57 -4.79 No 19 0.67 Yes -39 0.5 No 51 57.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 64466628 - NM_001007253 ERV3-1 1 7.01 0.75 34 6.34 81.72 10 4.98 No 59 1.33 Yes 0 0 No -24 0.81 Yes 50 69.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2722861 - NR_040023 ERVK13-1 1 48.13 1.92 55 8.95 83.6 25 6.24 Yes 12 0.94 Yes 0 0 No -24 0.69 Yes 46 80.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 124625074 - NM_138961 ESAM 1 0.54 0.42 23 10.01 85.59 21 5.32 No 66 1.21 Yes 0 0 No -29 0.83 Yes 41 80.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 124626227 - NM_138961 ESAM 1 0.3 0.26 15 9.18 88.12 17 4.87 No 40 1.23 Yes 0 0 No -25 0.47 No 45 84.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 19120662 - NM_052911 ESCO1 1 18.16 6.79 71 10.36 98.98 35 5.51 No 54 1.33 Yes 35 0.58 Yes -34 0.73 Yes 36 77.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 19120662 - NM_052911 ESCO1 1 0.83 0.31 19 10.36 98.98 35 5.51 No 54 1.33 Yes 35 0.58 Yes -34 0.73 Yes 36 77.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 19154987 - NM_052911 ESCO1 1 0.23 0.14 10 9.17 86.48 25 5.1 No 12 1.05 Yes 0 0 No -24 0.9 Yes 46 90.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 27634195 + NM_001017420 ESCO2 1 0.22 0.24 12 7.09 79.08 34 5.57 Yes 21 0.46 No 0 0 No -33 0.61 No 37 51.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 27651432 + NM_001017420 ESCO2 1 1.28 1.13 48 8.01 82.31 41 6.44 Yes -2 1.64 Yes 0 0 No -37 0.6 No 34 82.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 47349828 - NM_001984 ESD 1 2.18 10.5 72 6.69 87.11 32 4.19 No 1 0.85 Yes 31 0.8 Yes -25 0.42 No 46 46.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 47355720 - NM_001984 ESD 1 0.02 0.11 8 3.43 79.74 20 6.13 Yes 67 1.32 Yes 18 0.27 Yes -19 0.76 Yes 51 91.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 47358399 - NM_001984 ESD 1 0.05 0.14 8 7.98 84.59 30 6 Yes 49 -3.48 No 0 0 No -29 0.84 Yes 41 89.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 47359855 - NM_001984 ESD 1 0.56 1.54 56 4.15 70.79 38 6.16 Yes 71 -4.12 No 31 0.44 Yes -35 0.31 No 37 52.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 47362471 - NM_001984 ESD 1 0.02 0.13 9 3.21 84.37 22 4.85 No 57 0.45 No 0 0 No -21 0.4 No 49 47.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 47364797 - NM_001984 ESD 1 0.65 3.17 63 3.19 84.13 23 4.6 No 10 0.31 No 22 0.91 Yes -22 0.95 Yes 48 96.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 13750426 - NM_016649 ESF1 1 0.51 0.56 30 0.53 0 31 6.63 Yes 18 0.88 Yes 0 0 No -30 0.91 Yes 40 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53663309 + NM_012291 ESPL1 1 1.63 0.68 28 7.7 84.78 19 5.79 Yes 6 1.36 Yes 0 0 No -27 0.76 Yes 43 80.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53668573 + NM_012291 ESPL1 1 0.27 0.11 7 6.96 87.1 17 10.05 Yes 4 1.78 Yes 29 0.64 Yes -16 0.56 No 48 60.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 53681906 + NM_012291 ESPL1 1 0.45 0.15 10 5.39 81.27 26 5.49 No 69 0 No 0 0 No -25 0.85 Yes 45 74.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53684115 + NM_012291 ESPL1 1 0.34 0.14 10 -8.29 0 17 4.24 No 47 1.29 Yes 19 0.95 Yes -17 0.44 No 51 39.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 53684172 + NM_012291 ESPL1 1 0.94 0.36 18 2.12 80.26 22 4.75 No 49 1.14 Yes 0 0 No -21 0.85 Yes 49 70.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53685509 + NM_012291 ESPL1 1 0.22 0.13 7 10.59 85.34 34 4.47 No 45 1.75 Yes 0 0 No -27 0.82 Yes 43 86.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64081325 + NM_001282450 ESRRA 1 2.83 3.14 67 10.36 78.83 39 8.31 Yes 26 1.62 Yes 0 0 No -38 0.95 Yes 32 97.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64082215 + NM_001282450 ESRRA 1 10.87 11.22 72 2.57 73.07 28 6.63 Yes 15 2.07 Yes 24 0.94 Yes -27 0.69 Yes 43 88.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64082501 + NM_001282450 ESRRA 1 0.15 0.11 8 7.07 76.29 23 6.16 Yes 10 1.18 Yes 0 0 No -22 0.92 Yes 48 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64083094 + NM_001282450 ESRRA 1 0.81 0.96 38 7.71 81.29 29 5.18 No 41 0.37 No 0 0 No -28 0.61 No 42 58.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56522631 + NM_001184796 ESYT1 1 0.22 0.29 18 8.4 76.1 26 5.66 Yes 41 0.2 No 0 0 No -25 0.66 No 45 68.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56527893 + NM_001184796 ESYT1 1 529.03 167.42 72 4.29 77.48 25 6.2 Yes 65 1.54 Yes 24 0.91 Yes -24 0.85 Yes 46 90.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56531942 + NM_001184796 ESYT1 1 0.23 0.43 22 3.66 67.56 29 5.74 Yes 38 0.79 Yes 19 0.73 Yes -28 0.91 Yes 42 83.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56531981 + NM_001184796 ESYT1 1 0.07 0.15 10 -4.74 70.72 10 4.79 No -3 1.28 Yes 0 0 No -34 0.4 No 36 54.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56536596 + NM_001184796 ESYT1 1 0.09 0.19 12 1.94 0 13 3.1 No 10 0.34 No 24 0.48 Yes -22 0.65 No 48 79.53 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 158529809 - NM_020728 ESYT2 1 1.44 0.97 38 5.03 82.95 31 6.92 Yes 18 2.23 Yes 0 0 No -30 0.9 Yes 40 93.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 158533020 - NM_020728 ESYT2 1 0.27 0.18 11 8.82 86.98 30 5.38 No 60 -3.85 No 0 0 No -29 0.43 No 41 55.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 158538030 - NM_020728 ESYT2 1 0.12 0.17 11 8.5 81.73 44 5.82 Yes 50 1.53 Yes 0 0 No -43 0.58 No 27 73.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 158545535 - NM_020728 ESYT2 1 68.57 43.6 72 2.99 73.28 36 10.65 Yes 23 1.22 Yes 35 0.68 Yes -35 0.88 Yes 35 90.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 158551195 - NM_020728 ESYT2 1 0.3 0.19 14 8.87 83.39 35 7.55 Yes 71 0.63 No 0 0 No -37 0.64 No 33 89.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 158561742 - NM_020728 ESYT2 1 0.96 1.04 48 4.88 68.73 38 4.48 No 42 0.85 Yes 0 0 No -30 0.6 No 40 67.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 158577950 - NM_020728 ESYT2 1 0.1 0.14 8 6.09 85.02 19 7.07 Yes 6 1.32 Yes 0 0 No -18 0.6 No 52 84.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 158581101 - NM_020728 ESYT2 1 0.52 0.39 20 3.47 0 11 4.12 No 15 0.69 No 0 0 No -27 0.84 Yes 43 88.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 158584051 - NM_020728 ESYT2 1 1.62 1.13 45 2 78.34 21 4.9 No 49 -1.45 No 0 0 No -20 0.91 Yes 50 90.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 158619847 - NM_020728 ESYT2 1 0.56 0.29 15 3.37 0 49 7 Yes 36 0.8 Yes 0 0 No -44 0.43 No 26 76.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 67626304 + NM_019002 ETAA1 1 0.48 0.18 13 -0.22 0 51 7.06 Yes 5 0.77 No 0 0 No -36 0.58 No 34 57.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 67626358 + NM_019002 ETAA1 1 0.47 0.18 12 9.49 86.98 19 5.83 Yes 6 1.69 Yes 0 0 No -18 0.73 Yes 52 83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 67627475 + NM_019002 ETAA1 1 0.28 0.17 11 9.43 93.82 27 5.63 Yes 43 0.32 No 0 0 No -27 0.71 Yes 43 77.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 67629939 + NM_019002 ETAA1 1 0.83 0.49 21 3.32 83.06 45 6.47 Yes 72 0.61 No 0 0 No -34 0.89 Yes 36 85.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 67632128 + NM_019002 ETAA1 1 0.95 0.57 27 7.35 91.51 26 5.38 No 57 0.24 No 25 0.73 Yes -22 0.54 No 48 70.98 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 67632367 + NM_019002 ETAA1 1 7.01 4.07 69 3.71 71.91 34 5.78 Yes 53 0.52 No 0 0 No -34 0.49 No 37 54.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 67637044 + NM_019002 ETAA1 1 0.44 0.26 16 -1.03 80.29 29 4.27 No 10 0.89 Yes 0 0 No -22 0.51 No 48 64.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 137845880 - NM_004730 ETF1 1 0.06 0.29 17 5.66 80.27 20 7.14 Yes 7 0.91 Yes 0 0 No -19 0.67 Yes 51 82.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137846292 - NM_004730 ETF1 1 0.03 0.22 15 6.39 83.49 32 5.57 Yes 42 1.24 Yes 0 0 No -29 0.66 No 41 68.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 137847292 - NM_004730 ETF1 1 0.04 0.21 11 3.37 81.85 26 5.97 Yes 13 0.99 Yes 0 0 No -25 0.79 Yes 45 86.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137865368 - NM_004730 ETF1 1 0.66 2.58 64 9.32 89.03 35 6.91 Yes 6 1.03 Yes 34 0.5 Yes -32 0.71 Yes 38 67.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 76508935 - NM_000126 ETFA 1 0.05 0.25 15 0.38 0 29 6.17 Yes 13 0.64 No 0 0 No -29 0.86 Yes 41 85.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 76510019 - NM_000126 ETFA 1 0.39 1.64 54 9.41 80.52 14 5.65 Yes 1 1.08 Yes 27 0.76 Yes -27 0.88 Yes 43 82.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 76519572 - NM_000126 ETFA 1 0.2 1.33 50 7.99 87.74 22 5.27 No 63 1.56 Yes 0 0 No -21 0.48 No 42 54.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 76520208 - NM_000126 ETFA 1 0.08 0.51 29 6.66 75.63 30 6.32 Yes 50 0.18 No 0 0 No -29 0.6 No 47 63.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 76520239 - NM_000126 ETFA 1 0.03 0.22 13 2.5 75.48 15 5.45 No 59 1.06 Yes 32 0.4 Yes -31 0.66 No 39 49.08 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 76520242 - NM_000126 ETFA 1 0.05 0.29 17 2.74 73.67 12 5.17 No 56 1.06 Yes 32 0.4 Yes -28 0.68 Yes 42 50.99 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 76520260 - NM_000126 ETFA 1 0.07 0.5 24 3.22 71.19 51 7.84 Yes 38 1.06 Yes 23 0.9 Yes -23 0.75 Yes 47 84.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 76576802 - NM_000126 ETFA 1 0.04 0.24 12 4.22 85.02 19 5.78 Yes 3 0.61 No 24 0.4 Yes -25 0.23 No 45 43.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 76577269 - NM_000126 ETFA 1 0.74 4.33 70 5.83 83.86 34 7.24 Yes 21 2.11 Yes 33 0.94 Yes -33 0.81 Yes 37 90.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 76578745 - NM_000126 ETFA 1 0.13 0.67 32 5.2 84.01 41 6.71 Yes -3 0.2 No 0 0 No -40 0.62 No 30 73.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 76578805 - NM_000126 ETFA 1 0.22 1.19 46 1.2 81.83 21 5.2 No 29 -4.04 No 0 0 No -20 0.64 No 50 71.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 76584853 - NM_000126 ETFA 1 0.03 0.19 13 -3.62 82.98 48 6.81 Yes -1 -1.67 No 24 0.95 Yes -24 0.64 No 33 58.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 76589690 - NM_000126 ETFA 1 0.06 0.19 11 2.13 73.02 66 9.83 Yes 18 0.59 No 0 0 No -30 0.79 Yes 40 73.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 76602406 - NM_000126 ETFA 1 0.22 0.75 26 10.07 88.27 34 8.05 Yes 21 1.77 Yes 33 0.89 Yes -33 0.93 Yes 37 95.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 76602591 - NM_000126 ETFA 1 0.06 0.19 8 6.45 83.56 36 6.48 Yes 62 0.14 No 0 0 No -35 0.4 No 35 58.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 51848632 - NM_001985 ETFB 1 0.15 0.33 19 -4.67 0 27 6.43 Yes 14 -1.3 No 0 0 No -26 0.67 Yes 44 70.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 51856452 - NM_001985 ETFB 1 0.14 0.25 14 8.94 86.92 17 5.39 No NA NA NA 0 0 No -19 0.35 No 42 38.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 159606303 + NM_001281737 ETFDH 1 0.54 0.26 13 -0.12 64.79 37 7.25 Yes 43 -4.32 No 0 0 No -33 0.42 No 37 46.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 25348641 + NM_001001660 ETFRF1 1 3.15 1.21 48 8.13 88.53 46 6.05 Yes 33 1.46 Yes 20 0.55 Yes -45 0.42 No 25 69.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 25356658 + NM_001001660 ETFRF1 1 1.29 0.5 27 11.2 83.82 72 8.01 Yes 59 0.78 Yes 35 0.64 Yes -29 0.77 Yes 35 78.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 44019002 - NM_014297 ETHE1 1 0.1 0.1 7 9.06 83.9 30 5.04 No 21 2.04 Yes 0 0 No -33 0.58 No 41 68.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44030469 - NM_014297 ETHE1 1 2.68 3.03 63 2.02 75.37 32 6.48 Yes 19 0.24 No 0 0 No -20 0.52 No 13 43.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 22778747 + NM_018638 ETNK1 1 0.24 0.54 25 7.85 87.44 27 5.25 No 14 1.18 Yes 26 0.94 Yes -26 0.77 Yes 44 79.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 22784128 + NM_018638 ETNK1 1 0.29 0.63 30 4.46 84.41 30 4.34 No 12 0.43 No 0 0 No -30 0.54 No 40 51.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 22784153 + NM_018638 ETNK1 1 0.11 0.22 11 5.5 90.92 28 5.29 No 37 0.42 No 0 0 No -27 0.54 No 16 66.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 22797144 + NM_018638 ETNK1 1 1.18 3.74 63 5.68 90.14 20 5.48 No 73 0.62 No 24 0.69 Yes -24 0.36 No 51 39.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 22809365 + NM_018638 ETNK1 1 0.58 1.83 57 8.05 80.27 31 4.28 No 57 1.7 Yes 0 0 No -25 0.74 Yes 45 75.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 22819052 + NM_018638 ETNK1 1 0.3 0.65 35 7.57 76.62 42 6.48 Yes -2 0.73 No 0 0 No -41 0.48 No 29 54.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 22819615 + NM_018638 ETNK1 1 0.52 1.13 43 7.67 89.14 31 5.95 Yes 18 1.1 Yes 0 0 No -21 0.5 No 45 61.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 22821531 + NM_018638 ETNK1 1 1.16 2.53 65 8.59 87.9 31 5.91 Yes 75 0.75 No 0 0 No -30 0.42 No 40 55.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 22831202 + NM_018638 ETNK1 1 2.58 6.67 72 6.87 80.7 35 5.87 Yes 22 1.54 Yes 0 0 No -28 0.95 Yes 42 96.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 22831477 + NM_018638 ETNK1 1 0.13 0.35 19 7.31 89.43 22 4.8 No 29 0.48 No 0 0 No -22 0.43 No 46 70.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 22834863 + NM_018638 ETNK1 1 0.07 0.19 10 5.88 82.17 28 6.24 Yes 71 -2.55 No 0 0 No -27 0.72 Yes 43 66.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41610699 - NM_001261437 ETV4 1 1.49 0.15 8 4.77 80 27 4.97 No 31 2.13 Yes 0 0 No -26 0.65 No 44 86.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 185782263 - NM_004454 ETV5 1 1.21 0.19 10 2.74 76.24 37 6.4 Yes 24 1.15 Yes 0 0 No -36 0.78 Yes 34 82.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 185798182 - NM_004454 ETV5 1 0.64 0.1 7 6.96 81.93 20 7.39 Yes 7 1.9 Yes 0 0 No -30 0.39 No 34 42.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 185813940 - NM_004454 ETV5 1 0.7 0.17 8 7.67 86.26 34 6.84 Yes 21 1.35 Yes 0 0 No -33 0.84 Yes 37 88.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 11813949 + NM_001987 ETV6 1 0.47 0.68 33 10.77 86.96 26 7.68 Yes 13 0.68 No 0 0 No -25 0.85 Yes 45 86.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 11875533 + NM_001987 ETV6 1 0.1 0.15 11 9.06 87.41 23 5.29 No 10 0.09 No 0 0 No -22 0.93 Yes 48 89.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 11896751 + NM_001987 ETV6 1 0.82 1.26 46 5.67 77.54 34 6.1 Yes 21 1.6 Yes 0 0 No -33 0.89 Yes 37 86.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 11905386 + NM_001987 ETV6 1 9.88 14.78 72 5.7 86.83 49 7.87 Yes 57 1.12 Yes 0 0 No -48 0.92 Yes 22 91.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 11908481 + NM_001987 ETV6 1 0.12 0.15 10 11.74 88.37 29 5.43 No 16 1.39 Yes 0 0 No -28 0.83 Yes 42 93.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 11926776 + NM_001987 ETV6 1 0.24 0.28 16 8.07 87.17 34 4.25 No 68 -0.75 No 0 0 No -27 0.72 Yes 43 73.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 11955907 + NM_001987 ETV6 1 0.1 0.14 8 6.52 87.37 30 7.05 Yes 17 1.5 Yes 0 0 No -29 0.53 No 41 67.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 11978577 + NM_001987 ETV6 1 3.91 4.61 71 4.66 87.94 21 4.59 No 8 0.16 No 20 0.79 Yes -20 0.84 Yes 50 91.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 11979335 + NM_001987 ETV6 1 3.87 4.71 68 6.7 84.87 20 6.45 Yes 7 1.55 Yes 19 0.72 Yes -34 0.61 No 36 73.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 11979340 + NM_001987 ETV6 1 0.67 0.79 43 2.26 0 25 6.77 Yes 12 1.52 Yes 0 0 No -24 0.79 Yes 46 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 11981968 + NM_001987 ETV6 1 0.14 0.18 12 7.1 88.76 34 5.96 Yes 37 1.5 Yes 0 0 No -33 0.92 Yes 37 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 11993394 + NM_001987 ETV6 1 0.07 0.11 8 6.75 76.7 32 6.06 Yes 19 0.53 No 31 0.88 Yes -31 0.94 Yes 39 94.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 11993848 + NM_001987 ETV6 1 0.09 0.15 9 10.11 90.61 49 6.24 Yes 36 0.55 No 0 0 No -25 0.69 Yes 45 55.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 11997787 + NM_001987 ETV6 1 0.97 1.56 55 12.52 88.27 30 4.99 No 28 1.26 Yes 0 0 No -29 0.84 Yes 41 91.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 11999851 + NM_001987 ETV6 1 0.15 0.21 13 3.61 84.17 27 5.2 No 14 -0.4 No 0 0 No -26 0.69 Yes 44 39.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 12043804 + NM_001987 ETV6 1 0.04 0.1 7 6.54 96.48 24 5.1 No 11 0.23 No 0 0 No -23 0.62 No 47 70.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 36336894 - NM_001207035 ETV7 1 5.86 0.51 25 7.96 82.39 17 5.92 Yes 4 1.92 Yes 0 0 No -16 0.62 No 54 77.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 36354429 - NM_001207035 ETV7 1 2.09 0.19 10 9.69 88.48 22 6.31 Yes 60 0.72 No 0 0 No -21 0.67 Yes 49 73.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29647532 - NM_014210 EVI2A 1 1.85 2.76 66 4.61 75.26 47 8.57 Yes 30 0.74 No 25 0.9 Yes -25 0.9 Yes 45 78.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 29632662 - NM_006495 EVI2B 1 0.04 0.19 9 0.79 0 22 5.97 Yes 9 2.17 Yes 0 0 No -21 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 29634001 - NM_006495 EVI2B 1 0.42 1.74 55 9.08 86.59 37 5.97 Yes 27 1.19 Yes 0 0 No -29 0.81 Yes 41 70.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29634978 - NM_006495 EVI2B 1 0.89 3.43 65 7.66 81.59 27 6.78 Yes 14 0.19 No 0 0 No -26 0.81 Yes 44 82.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 92979523 - NM_001308248 EVI5 1 0.76 0.1 7 1.34 0 27 9.49 Yes 14 0.82 Yes 0 0 No -35 0.64 No 44 73.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 92980602 - NM_001308248 EVI5 1 1.58 0.14 10 8.17 87.72 14 3.54 No 1 1.74 Yes 0 0 No -24 0.89 Yes 46 91.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93049061 - NM_001308248 EVI5 1 1.79 0.15 8 3.37 0 36 7.71 Yes 23 1.58 Yes 0 0 No -35 0.89 Yes 35 92.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93094251 - NM_001308248 EVI5 1 0.69 0.1 7 6.55 86.07 15 3.75 No 7 0.5 No 0 0 No -24 0.77 Yes 46 78.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93169479 - NM_001308248 EVI5 1 4.59 0.82 37 9.62 85.34 41 6.7 Yes 28 1.55 Yes 40 0.54 Yes -40 0.65 No 30 83.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 93191253 - NM_001308248 EVI5 1 4.89 0.54 24 4.26 84 133 7.55 Yes 2 1.33 Yes 0 0 No -25 0.66 No 45 59.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7911385 + NM_145245 EVI5L 1 5.59 0.67 35 1.49 0 29 6.65 Yes 71 -2.56 No 22 0.81 Yes -28 0.75 Yes 42 78.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 7911467 + NM_145245 EVI5L 1 1.81 0.22 13 5.64 87.14 22 5.15 No 9 1.31 Yes 0 0 No -21 0.84 Yes 49 86.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7916360 + NM_145245 EVI5L 1 1.02 0.25 14 5.92 73.26 24 5.99 Yes 60 1.59 Yes 18 0.51 Yes -23 0.85 Yes 47 77.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 7917692 + NM_145245 EVI5L 1 1.61 0.35 19 7.07 89.35 26 5.56 Yes 13 0.83 Yes 25 0.93 Yes -25 0.9 Yes 45 89.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 7918301 + NM_145245 EVI5L 1 0.41 0.11 8 0.5 0 16 4.58 No 73 -3.99 No 0 0 No -21 0.42 No 55 43.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 7918387 + NM_145245 EVI5L 1 0.78 0.21 13 7.88 81.63 26 6.63 Yes -3 0.39 No 25 0.73 Yes -25 0.68 Yes 45 72.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 7920902 + NM_145245 EVI5L 1 0.63 0.19 12 -5.53 67.94 28 6.99 Yes 15 0.99 Yes 0 0 No -27 0.87 Yes 43 49.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 7921977 + NM_145245 EVI5L 1 3.21 0.93 37 4.72 76.27 93 9.8 Yes NA NA NA 19 0.21 Yes -48 0.33 No 51 20.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 100598948 + NM_001330221 EVL 1 0.14 0.22 13 9.97 92.38 23 6.48 Yes 10 1.14 Yes 0 0 No -22 0.9 Yes 48 95.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100599330 + NM_001330221 EVL 1 0.11 0.19 9 1.92 75.49 20 4.03 No 7 1.31 Yes 0 0 No -19 0.93 Yes 51 82.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100599383 + NM_001330221 EVL 1 0.3 0.5 26 5.25 80.14 24 5.48 No 60 1.31 Yes 0 0 No -23 0.88 Yes 47 71.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100599402 + NM_001330221 EVL 1 0.08 0.14 8 6.36 87.1 16 5.29 No 75 1.11 Yes 0 0 No -26 0.86 Yes 44 76.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100600537 + NM_001330221 EVL 1 0.18 0.31 18 4.78 85.5 28 6.56 Yes 66 1.39 Yes 0 0 No -27 0.83 Yes 43 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100600806 + NM_001330221 EVL 1 0.14 0.21 15 11.12 95.39 34 6.3 Yes 21 1.02 Yes 0 0 No -33 0.73 Yes 37 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100605670 + NM_001330221 EVL 1 0.12 0.18 10 10.48 89 27 5.7 Yes 14 0.69 No 26 0.87 Yes -26 0.92 Yes 44 76.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 100608276 + NM_001330221 EVL 1 0.08 0.14 7 6.64 76.48 27 5.53 No 14 0.2 No 0 0 No -26 0.49 No 44 65.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 100610044 + NM_001330221 EVL 1 0.19 0.33 20 -0.8 0 14 4 No 18 0.9 Yes 0 0 No -30 0.72 Yes 40 74.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100610350 + NM_001330221 EVL 1 0.08 0.13 9 6.58 79.8 30 5.23 No 65 1.45 Yes 29 0.88 Yes -29 0.8 Yes 41 77.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29668374 + NM_013986 EWSR1 1 0.17 1.82 61 -1.65 0 16 3.78 No 6 0.39 No 22 0.77 Yes -33 0.69 Yes 37 70.98 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29669726 + NM_013986 EWSR1 1 2.5 22.19 72 0.17 82.12 29 5.83 Yes 72 0.4 No 28 0.48 Yes -27 0.41 No 42 40.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 29684576 + NM_013986 EWSR1 1 0.18 1.75 48 5.51 82.54 23 6.14 Yes 23 -3.18 No 22 0.96 Yes -22 0.61 No 48 63.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 29684975 + NM_013986 EWSR1 1 0.36 0.96 44 8.9 87.31 30 5.38 No 64 0.47 No 0 0 No -29 0.91 Yes 41 90.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29686401 + NM_013986 EWSR1 1 0.2 0.47 23 5.67 91.57 66 6.86 Yes 17 0.72 No 29 0.85 Yes -29 0.9 Yes 41 84.68 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29687550 + NM_013986 EWSR1 1 103.84 258.28 72 7.9 86.79 38 5.99 Yes 10 0.47 No 22 0.76 Yes -22 0.91 Yes 48 95.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29688488 + NM_013986 EWSR1 1 0.04 0.36 20 1.05 0 17 4.58 No 27 0.99 Yes 27 0.57 Yes -39 0.59 No 31 62.29 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 29693822 + NM_013986 EWSR1 1 0.03 0.33 18 -4.77 0 9 3.87 No 16 1.06 Yes 0 0 No -32 0.86 Yes 38 88.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29695184 + NM_013986 EWSR1 1 1.51 10.31 72 7.92 80 33 7.35 Yes 20 1.2 Yes 32 0.91 Yes -32 0.67 Yes 38 89.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29696092 + NM_013986 EWSR1 1 0.06 0.51 20 6 75.06 24 6.4 Yes 11 1.8 Yes 26 0.98 Yes -23 0.92 Yes 47 86.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29696113 + NM_013986 EWSR1 1 0.01 0.13 8 -1.86 79.54 29 5.48 No 16 1.82 Yes 0 0 No -28 0.94 Yes 42 94.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69676313 + NR_034165 EXD2 1 1.41 0.18 12 4.85 74.74 24 5 No -3 0.83 Yes 0 0 No -23 0.59 No 47 37.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69701490 + NR_034165 EXD2 1 1.04 0.29 18 7.38 83.85 26 6.36 Yes 76 1.91 Yes 25 0.84 Yes -25 0.83 Yes 45 87.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 69703174 + NR_034165 EXD2 1 0.52 0.18 10 6.12 86.6 23 5.29 No 56 1.85 Yes 0 0 No -22 0.57 No 48 57.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 140314609 - NM_017820 EXD3 1 1.28 0.1 7 11.1 92 33 7.07 Yes 20 0.18 No 0 0 No -32 0.67 Yes 38 64.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 242012410 + NM_006027 EXO1 1 98.91 31.21 72 5.6 76.55 28 6.32 Yes 15 1.41 Yes 27 0.9 Yes -27 0.94 Yes 43 93.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 242012413 + NM_006027 EXO1 1 11.52 3.54 67 3.84 82.48 31 6.56 Yes 18 1.4 Yes 27 0.9 Yes -30 0.94 Yes 40 92.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 242012419 + NM_006027 EXO1 1 1.54 0.42 24 -12.23 0 14 3.87 No 24 1.39 Yes 0 0 No -36 0.9 Yes 34 91.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 242015350 + NM_006027 EXO1 1 0.73 0.43 24 7 89.92 20 4.77 No 70 -5.06 No 0 0 No -19 0.62 No 51 57.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 242015512 + NM_006027 EXO1 1 1.44 0.81 39 8.59 80 30 8.23 Yes 17 0.07 No 0 0 No -29 0.72 Yes 41 77.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 242015690 + NM_006027 EXO1 1 0.2 0.13 8 6.08 74.05 27 7.13 Yes 41 0.44 No 0 0 No -26 0.9 Yes 44 80.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 242021931 + NM_006027 EXO1 1 1.31 1.1 45 10.02 92.02 19 5.83 Yes 25 0.28 No 18 0.44 Yes -18 0.46 No 52 62.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 242023785 + NM_006027 EXO1 1 0.16 0.14 7 6.55 77.14 21 5.71 Yes 56 0.99 Yes 29 0.52 Yes -26 0.57 No 44 58.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 242024703 + NM_006027 EXO1 1 0.24 0.17 12 -4.89 0 31 7.32 Yes 18 0.41 No 34 0.74 Yes -30 0.71 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 242029886 + NM_006027 EXO1 1 1.88 1.42 50 11.48 88.27 24 6.37 Yes 44 0.83 Yes 0 0 No -23 0.58 No 39 57.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 242035336 + NM_006027 EXO1 1 39.62 25.01 72 6.14 93.74 21 5.14 No 8 0.19 No 0 0 No -27 0.93 Yes 43 97.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 56735220 + NM_178237 EXOC1 1 0.31 0.24 12 8.64 87.35 29 5.48 No 37 1.25 Yes 0 0 No -28 0.46 No 44 45.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 56738920 + NM_178237 EXOC1 1 1.29 0.85 42 6.07 75.66 80 7.06 Yes 24 0.59 No 0 0 No -22 0.84 Yes 48 69.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 56741162 + NM_178237 EXOC1 1 0.71 0.47 25 8.84 90.78 40 7.56 Yes 27 1.35 Yes 0 0 No -42 0.43 No 34 65.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 56744156 + NM_178237 EXOC1 1 0.17 0.11 7 5.54 76 30 8.26 Yes 17 0.97 Yes 0 0 No -29 0.6 No 41 58.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 56746626 + NM_178237 EXOC1 1 0.33 0.22 13 8.56 90.11 33 8.09 Yes 47 0.06 No 0 0 No -30 0.71 Yes 40 72.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 56755053 + NM_178237 EXOC1 1 24.98 13.38 72 4.58 77.95 43 7.6 Yes 30 1.32 Yes 0 0 No -42 0.81 Yes 28 92.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 56758710 + NM_178237 EXOC1 1 0.65 0.63 33 9.08 86.21 17 6.47 Yes 4 0.76 No 0 0 No -37 0.31 No 44 38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 56766724 + NM_178237 EXOC1 1 0.23 0.21 12 3.31 69.81 19 6.64 Yes 6 1.55 Yes 18 0.79 Yes -18 0.33 No 39 40.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 56768522 + NM_178237 EXOC1 1 0.29 0.26 14 2.53 84.17 17 4.69 No 30 0.56 No 0 0 No -42 0.89 Yes 28 94.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 505369 - NR_073064 EXOC2 1 0.58 0.24 13 5.54 89.86 35 6.79 Yes 22 1.67 Yes 0 0 No -34 0.96 Yes 36 96.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 514118 - NR_073064 EXOC2 1 1.75 0.81 34 10.62 90.56 20 5.91 Yes 7 0.52 No 0 0 No -22 0.67 Yes 48 64.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 524350 - NR_073064 EXOC2 1 0.94 0.44 27 7.33 79.62 78 5.97 Yes 41 0.96 Yes 0 0 No -29 0.66 Yes 41 81.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 525092 - NR_073064 EXOC2 1 0.2 0.11 7 4.15 76.08 13 4.98 No 0 2.22 Yes 0 0 No -21 0.95 Yes 49 92.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 529586 - NR_073064 EXOC2 1 0.28 0.14 8 -0.67 0 26 4.51 No 70 1.69 Yes 0 0 No -29 0.61 No 45 59.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 534581 - NR_073064 EXOC2 1 0.42 0.33 21 11.19 84.03 40 6.4 Yes 48 -2.95 No 0 0 No -39 0.49 No 31 65.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 548954 - NR_073064 EXOC2 1 0.27 0.21 14 10.6 86.3 27 7.65 Yes 9 0.78 Yes 0 0 No -26 0.7 Yes 44 75.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 552431 - NR_073064 EXOC2 1 0.57 0.49 27 5.9 87.76 37 6.08 Yes 24 0.28 No 0 0 No -35 0.35 No 46 33.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 556526 - NR_073064 EXOC2 1 0.25 0.22 13 7.66 88.91 27 5.48 No 63 0.85 Yes 0 0 No -26 0.47 No 45 63.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 582690 - NR_073064 EXOC2 1 1.13 1 40 7.5 82.36 28 5.43 No 74 -5.48 No 0 0 No -27 0.66 Yes 43 56.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 583438 - NR_073064 EXOC2 1 0.28 0.28 18 6.69 77.98 27 4.6 No -1 0.95 Yes 0 0 No -26 0.57 No 49 77.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 619541 - NR_073064 EXOC2 1 0.54 0.43 24 0.98 73.09 34 6.03 Yes 54 1.04 Yes 0 0 No -40 0.41 No 30 36.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 447132 + NM_007277 EXOC3 1 0.43 0.53 30 3.96 79.22 27 5.4 No 3 1.07 Yes 26 0.84 Yes -26 0.7 Yes 44 93.37 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 447545 + NM_007277 EXOC3 1 0.25 0.33 17 4.32 81.75 45 7.18 Yes 7 1.52 Yes 0 0 No -44 0.56 No 26 54.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 464899 + NM_007277 EXOC3 1 0.14 0.13 8 9.51 80.43 23 5.26 No 51 0.07 No 27 0.57 Yes -23 0.64 No 47 74.57 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 132938295 + NM_021807 EXOC4 1 1.91 2.46 60 7.69 83.39 35 6.05 Yes 15 0.9 Yes 27 0.77 Yes -27 0.53 No 36 50.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 132938298 + NM_021807 EXOC4 1 0.1 0.11 7 3.23 81.53 38 6.21 Yes 18 0.91 Yes 0 0 No -30 0.57 No 40 53.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 132960587 + NM_021807 EXOC4 1 0.56 0.53 26 11.64 88.27 35 4.61 No 57 0.58 No 0 0 No -34 0.67 Yes 36 44.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 132991842 + NM_021807 EXOC4 1 0.08 0.1 7 7.59 88.86 31 7.08 Yes 4 1.08 Yes 0 0 No -22 0.58 No 48 51.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 133077329 + NM_021807 EXOC4 1 0.36 0.31 17 12.76 88.82 29 6.11 Yes 16 1.12 Yes 0 0 No -28 0.59 No 42 77.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 133165040 + NM_021807 EXOC4 1 0.28 0.25 15 6.93 81.27 34 5.71 Yes 21 0.76 No 0 0 No -29 0.54 No 37 59.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 133168793 + NM_021807 EXOC4 1 0.79 0.69 31 10.39 93.14 38 6.79 Yes 58 0.42 No 27 0.88 Yes -27 0.85 Yes 43 84.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 133305787 + NM_021807 EXOC4 1 0.23 0.21 14 8.23 82.22 26 5.66 Yes 21 1.07 Yes 0 0 No -25 0.88 Yes 45 90.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 133586702 + NM_021807 EXOC4 1 0.39 0.36 15 5.26 84.6 21 4.33 No 20 0.06 No 0 0 No -21 0.79 Yes 49 87.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 133625549 + NM_021807 EXOC4 1 0.1 0.11 7 4.5 80.79 24 4.98 No 75 0.65 No 0 0 No -23 0.82 Yes 47 64.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 133693282 + NM_021807 EXOC4 1 0.29 0.25 14 9.86 95.71 58 7.38 Yes 45 0.3 No 0 0 No -25 0.56 No 45 72.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 57676550 - NM_006544 EXOC5 1 0.33 0.64 28 6.64 82.97 26 5.35 No 73 1.23 Yes 0 0 No -25 0.93 Yes 45 95.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 57698331 - NM_006544 EXOC5 1 0.19 0.5 29 -0.59 80.52 31 5.16 No 23 0.75 No 0 0 No -30 0.83 Yes 40 87.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 57699466 - NM_006544 EXOC5 1 0.08 0.18 11 -1.19 81.44 29 4.02 No 5 1.88 Yes 0 0 No -28 0.92 Yes 42 87.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 57710355 - NM_006544 EXOC5 1 0.16 0.32 15 6.1 76.52 27 6.87 Yes 1 1.11 Yes 26 0.9 Yes -26 0.69 Yes 44 84.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 57713546 - NM_006544 EXOC5 1 0.99 1.82 59 4.25 78.55 29 4.67 No 36 0.28 No 25 0.57 Yes -23 0.6 No 42 41.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 94689516 + NM_001013848 EXOC6 1 0.41 0.15 11 3.27 73.32 24 4.1 No 4 0.47 No 0 0 No -23 0.89 Yes 47 91.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 94712032 + NM_001013848 EXOC6 1 11.16 4.5 72 5.41 88.64 21 7.87 Yes 8 1.37 Yes 0 0 No -20 0.65 No 46 28.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 94751815 + NM_001013848 EXOC6 1 1.05 0.26 14 8.66 86.67 22 5.81 Yes 17 -2.39 No 0 0 No -24 0.38 No 49 56.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 94759006 + NM_001013848 EXOC6 1 4.24 1.42 53 9.95 89.95 32 5.92 Yes 42 0.79 Yes 31 0.81 Yes -31 0.78 Yes 39 64.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 94774106 + NM_001013848 EXOC6 1 0.83 0.24 14 7.34 86.32 44 8.7 Yes 31 2.55 Yes 0 0 No -26 0.82 Yes 44 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 94776079 + NM_001013848 EXOC6 1 0.45 0.14 9 7.28 85.02 24 7.42 Yes 11 1.03 Yes 0 0 No -23 0.96 Yes 47 96.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 72691470 - NM_001321731 EXOC6B 1 2.24 0.22 13 8.01 81.58 21 6.74 Yes 8 1.08 Yes 0 0 No -24 0.31 No 50 44.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 72794274 - NM_001321731 EXOC6B 1 0.74 0.14 8 12.17 85.71 38 6.4 Yes 67 1.37 Yes 0 0 No -38 0.4 No 33 62.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 72907865 - NM_001321731 EXOC6B 1 0.81 0.14 9 5.15 84.41 28 5.5 No 33 0.5 No 0 0 No -31 0.62 No 39 81.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 72998937 - NM_001321731 EXOC6B 1 1.78 0.15 10 12.24 87.01 34 6.61 Yes 21 1.44 Yes 0 0 No -37 0.61 No 33 74.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 74080163 - NM_001282313 EXOC7 1 0.11 0.17 10 1.44 77.97 22 5 No 63 0.9 Yes 0 0 No -19 0.43 No 45 43.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 74084736 - NM_001282313 EXOC7 1 0.19 0.28 14 5.97 82.9 30 6.31 Yes NA NA NA 0 0 No -29 0.5 No 41 56.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 74085844 - NM_001282313 EXOC7 1 0.75 0.18 11 8.23 90.09 26 6.24 Yes 13 1.61 Yes 0 0 No -25 0.94 Yes 45 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74085844 - NM_001282313 EXOC7 1 0.47 0.13 7 8.23 90.09 26 6.24 Yes 13 1.61 Yes 0 0 No -25 0.94 Yes 45 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74086479 - NM_001282313 EXOC7 1 307.05 78.69 72 6.56 77.84 38 8.43 Yes 25 0.29 No 37 0.25 Yes -37 0.56 No 34 73.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 74086479 - NM_001282313 EXOC7 1 5.41 1.33 49 6.56 77.84 38 8.43 Yes 25 0.29 No 37 0.25 Yes -37 0.56 No 34 73.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 74086541 - NM_001282313 EXOC7 1 1.21 0.29 16 6.65 76.17 26 5.57 Yes 33 1.87 Yes 0 0 No -25 0.68 Yes 45 42.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 74086563 - NM_001282313 EXOC7 1 1.14 0.29 20 -5.18 0 13 3.86 No 11 1.86 Yes 23 0.86 Yes -48 0.41 No 22 49.59 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 74086569 - NM_001282313 EXOC7 1 0.96 0.24 15 -0.66 72.8 18 7.84 Yes 5 1.89 Yes 23 0.86 Yes -17 0.38 No 53 54.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 74087354 - NM_001282313 EXOC7 1 0.33 0.28 15 11.21 80.92 14 6.48 Yes 1 1.63 Yes 29 0.89 Yes -35 0.32 No 47 49.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 74097450 - NM_001282313 EXOC7 1 0.14 0.18 11 5.78 0 11 4.12 No 18 2.4 Yes 0 0 No -30 0.88 Yes 40 93.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 38548349 + NM_001318959 EXOG 1 0.51 0.29 19 2.78 0 31 5.92 Yes 61 0.27 No 0 0 No -30 0.55 No 40 71.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 38560752 + NM_001318959 EXOG 1 0.86 0.42 24 7.73 80.56 28 5.42 No 15 1 Yes 27 0.92 Yes -27 0.94 Yes 43 93.84 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 38563601 + NM_001318959 EXOG 1 0.39 0.15 10 4.46 75.44 29 5.46 No 72 0.02 No 0 0 No -28 0.39 No 42 69.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 38564663 + NM_001318959 EXOG 1 2.37 1.1 43 7.44 87.82 22 5.04 No 49 0.67 No 21 0.77 Yes -21 0.71 Yes 49 87.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 99196208 - NM_001318365 EXOSC1 1 0.08 0.15 9 5.97 81.63 17 5.01 No 69 -5.29 No 0 0 No -28 0.62 No 53 51.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 99196301 - NM_001318365 EXOSC1 1 0.14 0.29 17 1.48 0 11 4.12 No 69 -2.35 No 0 0 No -30 0.56 No 40 69.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 99197040 - NM_001318365 EXOSC1 1 0.13 0.35 19 -5.9 0 30 6.7 Yes 17 2.17 Yes 36 0.91 Yes -29 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 11131046 - NM_002685 EXOSC10 1 3.16 5.15 72 -13.55 0 15 4 No 72 -4.55 No 18 0.68 Yes -14 0.43 No 38 39.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 11142826 - NM_002685 EXOSC10 1 0.32 0.35 20 5.86 79.61 32 5.57 Yes -2 0.43 No 0 0 No -31 0.71 Yes 39 58.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 11142852 - NM_002685 EXOSC10 1 0.18 0.19 14 3.87 82.99 22 5.66 Yes 65 -4.62 No 0 0 No -29 0.5 No 45 38.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 11147185 - NM_002685 EXOSC10 1 2.77 3.14 66 3.4 74.62 25 6.29 Yes 12 0.55 No 0 0 No -24 0.9 Yes 46 70.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 11147960 - NM_002685 EXOSC10 1 0.1 0.14 9 -0.53 0 15 4.12 No 39 0.74 No 0 0 No -43 0.67 Yes 27 76.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 133574689 + NM_014285 EXOSC2 1 0.14 0.15 11 -3.02 62.49 16 4.69 No 67 -5.21 No 29 0.81 Yes -30 0.6 No 38 54.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 133576484 + NM_014285 EXOSC2 1 0.18 0.25 13 2.9 65.35 27 7.35 Yes 14 1.15 Yes 0 0 No -26 0.8 Yes 44 62.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 133576945 + NM_014285 EXOSC2 1 0.17 0.28 14 -2.81 0 16 4.21 No 45 0.84 Yes 0 0 No -16 0.72 Yes 55 74.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 133577529 + NM_014285 EXOSC2 1 1.82 2.86 57 -7.26 0 12 4.24 No 24 0.76 No 27 0.9 Yes -36 0.55 No 34 66.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 133577036 + NM_014285 EXOSC2 1 0.55 0.81 36 7.27 92.12 35 7.18 Yes 28 0.34 No 0 0 No -34 0.61 No 30 78.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 133577524 + NM_014285 EXOSC2 1 0.06 0.1 7 3.72 0 32 5.67 Yes 19 0.79 Yes 27 0.9 Yes -31 0.58 No 39 68.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 133577544 + NM_014285 EXOSC2 1 0.36 0.54 29 2.73 82.73 18 4.9 No 39 0.77 No 23 0.36 Yes -51 0.53 No 19 65.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 133577608 + NM_014285 EXOSC2 1 0.18 0.22 11 4.46 71.54 22 4.91 No 12 -1.43 No 0 0 No -24 0.8 Yes 46 66.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 133578463 + NM_014285 EXOSC2 1 0.09 0.14 9 -0.75 71.17 29 5.74 Yes 65 1.47 Yes 0 0 No -28 0.76 Yes 42 75.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37782135 - NM_001002269 EXOSC3 1 1211.76 198.83 72 6.57 78.53 25 4.4 No 12 0.13 No 24 0.52 Yes -24 0.6 No 47 58.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 145135250 + NM_019037 EXOSC4 1 0.16 0.21 11 7.6 71.69 26 5.37 No 55 -2.45 No 0 0 No -28 0.78 Yes 42 87.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 41893506 - NM_020158 EXOSC5 1 0.3 0.43 21 -8.23 79.81 29 6.59 Yes 50 0.59 No 0 0 No -28 0.59 No 42 73.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 41895818 - NM_020158 EXOSC5 1 1.13 1.03 45 -3.76 0 15 5.43 No 2 0.99 Yes 22 0.8 Yes -15 0.71 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 41898052 - NM_020158 EXOSC5 1 0.23 0.25 15 -7.99 0 47 7.28 Yes NA NA NA 29 0.42 Yes -48 0.51 No 17 45.87 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 45018660 + NM_015004 EXOSC7 1 0.14 0.15 11 4.45 78.28 47 6.92 Yes 34 1.45 Yes 0 0 No -46 0.3 No 24 42.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 45030635 + NM_015004 EXOSC7 1 0.19 0.17 11 -8.03 0 34 5.92 Yes 0 0.4 No 29 0.75 Yes -28 0.33 No 58 40.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 45031506 + NM_015004 EXOSC7 1 0.08 0.21 11 9.51 79.43 29 6.87 Yes 16 0.77 Yes 0 0 No -28 0.82 Yes 42 69.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 45043333 + NM_015004 EXOSC7 1 0.09 0.13 7 5.51 75.77 30 8.51 Yes -4 -1.89 No 0 0 No -29 0.87 Yes 41 83.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 45045100 + NM_015004 EXOSC7 1 0.21 0.28 15 6.31 89.37 19 5.66 Yes 6 1.67 Yes 0 0 No -18 0.79 Yes 52 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45048947 + NM_015004 EXOSC7 1 0.16 0.21 14 3.07 86.96 30 6.71 Yes 57 0.56 No 0 0 No -29 0.69 Yes 41 76.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 37575885 + NM_181503 EXOSC8 1 0.46 0.42 20 2.72 76.52 29 5.29 No 75 -5.89 No 28 0.86 Yes -28 0.88 Yes 42 56.58 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr13 37576385 + NM_181503 EXOSC8 1 0.1 0.11 8 -0.24 0 16 4.35 No 3 0.16 No 21 0.84 Yes -21 0.43 No 49 59.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 37576625 + NM_181503 EXOSC8 1 0.06 0.14 8 -14.68 0 32 5.2 No 19 0.58 No 0 0 No -31 0.35 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 37577631 + NM_181503 EXOSC8 1 0.44 1.26 51 9.69 88.32 40 7.72 Yes 4 1.04 Yes 26 0.85 Yes -26 0.44 No 37 50.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 37578613 + NM_181503 EXOSC8 1 0.2 0.54 27 6.47 82.79 30 6.62 Yes 10 1.01 Yes 29 0.9 Yes -29 0.53 No 41 54.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 37578616 + NM_181503 EXOSC8 1 0.08 0.22 16 2.45 77 33 6.81 Yes 13 1.02 Yes 28 0.76 Yes -32 0.41 No 45 54.82 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 37580093 + NM_181503 EXOSC8 1 2.64 6.83 71 -1.82 73.91 32 6.78 Yes 19 1.34 Yes 31 0.82 Yes -31 0.87 Yes 39 92.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 37582198 + NM_181503 EXOSC8 1 1.52 3.11 68 2.84 0 35 4.9 No 22 0.77 No 25 0.93 Yes -30 0.78 Yes 40 90.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 122724045 + NM_001034194 EXOSC9 1 0.08 0.11 7 1.04 69.59 43 6.96 Yes 39 0.84 Yes 31 0.68 Yes -29 0.88 Yes 41 87.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 122725841 + NM_001034194 EXOSC9 1 0.07 0.11 8 0.63 74.14 26 4.67 No -2 0.36 No 0 0 No -32 0.39 No 38 50.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 122726985 + NM_001034194 EXOSC9 1 0.13 0.25 16 4.62 0 36 6.5 Yes 41 0.79 Yes 0 0 No -38 0.6 No 32 67.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 122730988 + NM_001034194 EXOSC9 1 0.62 0.96 38 10.42 86.11 28 7.67 Yes 15 1.07 Yes 27 0.41 Yes -27 0.44 No 37 46.4 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 122734909 + NM_001034194 EXOSC9 1 0.67 1.56 51 10.32 90.13 18 4.88 No 54 1.18 Yes 21 0.82 Yes -21 0.87 Yes 49 88.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 122736174 + NM_001034194 EXOSC9 1 0.81 0.22 11 2.61 80.34 25 5.61 Yes 12 0.78 Yes 0 0 No -24 0.68 Yes 46 79.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 122736504 + NM_001034194 EXOSC9 1 1.53 0.49 24 7.38 72.79 15 7.04 Yes 36 1.07 Yes 25 0.54 Yes -25 0.55 No 45 64.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 122737544 + NM_001034194 EXOSC9 1 0.83 0.28 16 4.09 76.73 25 5.36 No 47 1.26 Yes 0 0 No -60 0.37 No 45 29.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 44117798 + NM_207122 EXT2 1 0.59 0.19 12 5.49 90.62 12 5.15 No 45 2.09 Yes 0 0 No -57 0.34 No 45 54.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 44125256 + NM_207122 EXT2 1 1.31 0.47 23 5.39 79.31 24 5.09 No 19 0.39 No 29 0.54 Yes -19 0.76 Yes 51 88.79 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 44137450 + NM_207122 EXT2 1 0.66 0.32 20 10.23 81.49 31 4.5 No 62 0.32 No 24 0.81 Yes -24 0.76 Yes 46 71.15 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 44138539 + NM_207122 EXT2 1 0.23 0.14 8 3.97 84.41 27 6.71 Yes 14 1.03 Yes 0 0 No -26 0.95 Yes 44 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 101339965 - NM_001439 EXTL2 1 1.14 0.22 15 6.81 72.75 13 5.4 No 41 1.34 Yes 0 0 No -53 0.64 No 17 88.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 101341763 - NM_001439 EXTL2 1 0.92 0.18 11 0.79 60.04 33 6.08 Yes 20 0.05 No 0 0 No -33 0.66 No 37 85.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 101341832 - NM_001439 EXTL2 1 1.29 0.25 13 6.26 71.44 30 7 Yes -4 0.38 No 0 0 No -29 0.87 Yes 41 86.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 101342418 - NM_001439 EXTL2 1 6.88 2.49 56 5.7 87.45 62 7.81 Yes 19 0.28 No 0 0 No -31 0.69 Yes 44 73.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 101343204 - NM_001439 EXTL2 1 0.73 0.22 12 4.4 77.76 22 5.28 No 1 -2.02 No 0 0 No -25 0.95 Yes 45 97.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 101344004 - NM_001439 EXTL2 1 2.15 0.76 33 6.39 82.57 44 6.71 Yes 31 1.36 Yes 20 0.73 Yes -20 0.5 No 27 43.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 101351469 - NM_001439 EXTL2 1 0.51 0.17 11 9.54 87.07 22 7.67 Yes 9 0.66 No 31 0.81 Yes -21 0.66 No 49 86.32 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 28559481 + NM_001440 EXTL3 1 0.68 0.14 9 8.69 83.55 59 8.48 Yes 46 0.93 Yes 0 0 No -21 0.44 No 49 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 28590430 + NM_001440 EXTL3 1 1.44 0.43 23 7.86 85.22 22 5.74 Yes 9 1.16 Yes 0 0 No -21 0.78 Yes 49 85.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28590433 + NM_001440 EXTL3 1 0.76 0.22 12 3.31 79.93 25 6 Yes 12 1.13 Yes 0 0 No -24 0.83 Yes 46 89.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28600638 + NM_001440 EXTL3 1 1.16 0.47 24 6.03 78.03 41 6.71 Yes 28 1.48 Yes 0 0 No -26 0.46 No 30 74.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 28303901 - NM_001990 EYA3 1 0.45 0.49 23 7.33 92.61 13 5.08 No 40 0.57 No 22 0.65 Yes -41 0.48 No 48 70.01 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 28324863 - NM_001990 EYA3 1 9.66 8.9 72 5.12 74.93 35 8.64 Yes 0 0.73 No 25 0.41 Yes -31 0.43 No 39 48.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 28336254 - NM_001990 EYA3 1 0.27 0.32 20 8.88 82.75 74 7.05 Yes 27 2.36 Yes 0 0 No -39 0.59 No 31 76.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 28337595 - NM_001990 EYA3 1 0.26 0.25 16 -8.06 79.72 33 7.32 Yes 60 2.58 Yes 29 0.91 Yes -27 0.54 No 43 58.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 28338223 - NM_001990 EYA3 1 0.38 0.4 21 10.87 77.33 40 9.33 Yes 27 1.28 Yes 0 0 No -39 0.7 Yes 31 76.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28345245 - NM_001990 EYA3 1 0.43 0.19 12 9.32 86.21 18 4.35 No 5 0.81 Yes 0 0 No -18 0.43 No 52 57.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 28354351 - NM_001990 EYA3 1 0.27 0.15 9 7.5 85.03 28 5.07 No 37 0.15 No 0 0 No -27 0.53 No 44 60.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28358990 - NM_001990 EYA3 1 0.89 0.51 30 5.94 86.02 26 3.72 No 75 1.1 Yes 0 0 No -26 0.78 Yes 44 85.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28368920 - NM_001990 EYA3 1 0.12 0.19 9 0.99 0 22 3.61 No 42 1.13 Yes 0 0 No -54 0.55 No 27 66.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 28369157 - NM_001990 EYA3 1 0.14 0.21 12 -2.02 0 30 6.63 Yes 17 1.62 Yes 0 0 No -29 0.9 Yes 41 93.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28374941 - NM_001990 EYA3 1 0.26 0.29 21 -2.11 0 24 6.24 Yes 11 1.08 Yes 26 0.63 Yes -23 0.51 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 28378195 - NM_001990 EYA3 1 0.12 0.14 9 9.74 86.79 29 5.75 Yes 16 1.15 Yes 0 0 No -28 0.61 No 42 79.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 28383270 - NM_001990 EYA3 1 0.2 0.24 14 8.71 81.09 19 5.32 No 6 0.44 No 0 0 No -22 0.47 No 52 58.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28406963 - NM_001990 EYA3 1 10.13 10.6 72 3.95 0 46 8.92 Yes 33 1.25 Yes 0 0 No -45 0.65 No 25 85.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 28407606 - NM_001990 EYA3 1 0.29 0.28 16 12.2 93.11 39 6.38 Yes 26 1.28 Yes 0 0 No -34 0.75 Yes 36 84.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40855057 - NM_001991 EZH1 1 2.71 0.47 26 -6.36 63.32 49 6.01 Yes 25 1.31 Yes 0 0 No -37 0.59 No 33 86.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 40858132 - NM_001991 EZH1 1 0.86 0.31 17 5.98 80.79 25 3.77 No 30 -0.81 No 25 0.53 Yes -28 0.5 No 42 61.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 40876633 - NM_001991 EZH1 1 0.21 0.11 8 6.95 86.24 24 5.91 Yes 67 1.08 Yes 23 0.86 Yes -28 0.63 No 42 81.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 148504825 - NM_001203248 EZH2 1 0.17 0.28 15 1.17 68.54 35 5.18 No 58 0.85 Yes 28 0.62 Yes -28 0.86 Yes 42 62.86 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 148504876 - NM_001203248 EZH2 1 0.15 0.26 8 3.91 80.99 31 4.56 No 7 0.87 Yes 0 0 No -19 0.59 No 12 52.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 148506263 - NM_001203248 EZH2 1 0.46 1.08 43 2.21 71.63 38 6.99 Yes 25 0.85 Yes 22 0.97 Yes -37 0.85 Yes 33 78.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 148507982 - NM_001203248 EZH2 1 0.14 0.17 11 3.01 0 41 7.21 Yes 28 1.75 Yes 0 0 No -40 0.84 Yes 30 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148509161 - NM_001203248 EZH2 1 0.05 0.11 7 8.16 81.97 30 6.32 Yes 67 -4.43 No 0 0 No -29 0.89 Yes 41 88.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 148513047 - NM_001203248 EZH2 1 2.71 4.58 65 11.7 92.08 29 4.6 No 59 -3.2 No 0 0 No -28 0.64 No 47 55.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148514505 - NM_001203248 EZH2 1 0.15 0.32 16 5.86 81.23 29 6.28 Yes 61 1.3 Yes 26 0.95 Yes -29 0.5 No 41 65.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 148516138 - NM_001203248 EZH2 1 0.23 0.5 25 3.3 76.76 22 4.78 No 32 0.36 No 0 0 No -21 0.6 No 26 74.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 148516152 - NM_001203248 EZH2 1 1.68 3.54 65 2.74 69.94 45 6.17 Yes 18 0.37 No 30 0.9 Yes -30 0.61 No 40 81.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 148516964 - NM_001203248 EZH2 1 0.18 0.47 21 -3.73 74.19 44 6.35 Yes 31 0.73 No 0 0 No -31 0.75 Yes 27 87.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 148523593 - NM_001203248 EZH2 1 0.31 0.71 36 7.11 83.72 28 6.18 Yes 15 0.79 Yes 0 0 No -27 0.96 Yes 43 97.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148534051 - NM_001203248 EZH2 1 1.56 0.28 16 2.8 78.19 36 7.14 Yes 23 1.51 Yes 0 0 No -35 0.95 Yes 35 94.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148534093 - NM_001203248 EZH2 1 11.38 1.88 55 13.6 91.9 22 6.24 Yes 9 0.95 Yes 22 0.48 Yes -21 0.84 Yes 49 72.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 148534093 - NM_001203248 EZH2 1 0.91 0.13 9 13.6 91.9 22 6.24 Yes 9 0.95 Yes 22 0.48 Yes -21 0.84 Yes 49 72.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 148543680 - NM_001203248 EZH2 1 0.44 0.72 35 -6.38 0 14 4.11 No 45 1.48 Yes 0 0 No -57 0.76 Yes 13 87.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148543689 - NM_001203248 EZH2 1 0.34 0.56 31 -6.87 80.72 49 7.92 Yes 36 1.48 Yes 0 0 No -48 0.67 Yes 22 81.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148547618 - NM_001203248 EZH2 1 0.45 0.15 9 10.92 93.58 34 6.68 Yes 34 0.56 No 0 0 No -33 0.76 Yes 37 80.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 148568018 - NM_001203248 EZH2 1 0.39 0.13 8 2.07 84.41 34 5.9 Yes 13 0.95 Yes 0 0 No -33 0.81 Yes 37 88.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 159188170 - NM_001111077 EZR 1 0.15 1.15 37 10.47 85.41 36 5.62 Yes 38 0.26 No 0 0 No -31 0.77 Yes 39 85.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 159190975 - NM_001111077 EZR 1 0.07 0.5 25 -4.42 70.57 30 4.65 No 17 0.21 No 0 0 No -29 0.84 Yes 41 68.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 159192528 - NM_001111077 EZR 1 0.01 0.13 9 8.94 86.12 31 4.94 No NA NA NA 0 0 No -32 0.73 Yes 40 70.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 159193581 - NM_001111077 EZR 1 0.05 0.64 30 9.77 93.38 20 5.83 Yes 7 0.96 Yes 0 0 No -19 0.58 No 51 80.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 159195604 - NM_001111077 EZR 1 0.05 0.61 33 6.47 80.93 31 6.86 Yes 18 0.73 No 0 0 No -30 0.69 Yes 40 81.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 159196358 - NM_001111077 EZR 1 0.02 0.25 16 0.55 75.26 38 6.48 Yes 36 0.49 No 0 0 No -37 0.81 Yes 33 83.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 159204697 - NM_001111077 EZR 1 0.02 0.17 9 -0.25 70.95 32 6.48 Yes 19 1.76 Yes 0 0 No -31 0.64 No 39 85.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 159209510 - NM_001111077 EZR 1 0.03 0.25 13 -6.67 78.04 22 7.28 Yes 9 1.35 Yes 0 0 No -21 0.73 Yes 49 78.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 159209512 - NM_001111077 EZR 1 0.11 1.07 42 5.24 80.12 20 7.14 Yes 7 1.36 Yes 19 0.71 Yes -19 0.59 No 51 82.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 160977352 - NM_001348091 F11R 1 0.11 0.13 8 9.95 85.59 33 5.88 Yes 72 1.06 Yes 0 0 No -32 0.86 Yes 38 85.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 6262683 - NM_000129 F13A1 1 1.78 0.25 14 9.79 82.22 26 6.54 Yes 13 1.29 Yes 0 0 No -25 0.72 Yes 45 71.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79513567 - NM_025161 FAAP100 1 1.09 0.5 25 8.55 90.51 20 5.91 Yes 7 1.41 Yes 19 0.89 Yes -19 0.91 Yes 51 93.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79514576 - NM_025161 FAAP100 1 0.81 0.33 20 4.91 77.22 18 4.14 No 71 -2.31 No 0 0 No -23 0.47 No 47 40.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79514686 - NM_025161 FAAP100 1 0.51 0.18 12 -0.2 78.04 25 5.08 No 24 0.46 No 0 0 No -21 0.26 No 64 21.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79514689 - NM_025161 FAAP100 1 0.33 0.14 10 -0.66 81.79 22 4.78 No 21 0.46 No 0 0 No -43 0.3 No 52 45.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 33464389 + NM_152266 FAAP24 1 7.13 1.06 41 6.93 78.19 27 5.29 No 14 0.75 No 26 0.93 Yes -26 0.9 Yes 44 90.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 31841984 - NM_004102 FABP3 1 0.17 0.1 7 0.76 63.6 69 8.45 Yes 72 1.37 Yes 27 0.9 Yes -27 0.71 Yes 43 77.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 82196126 + NM_001444 FABP5 1 0.07 0.32 18 6.83 81.12 10 5.29 No 30 0.58 No 0 0 No -42 0.61 No 28 63.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 61569628 - NM_013402 FADS1 1 0.43 0.61 32 7.5 83.54 20 5.37 No 7 0.65 No 0 0 No -19 0.57 No 51 51.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 61570361 - NM_013402 FADS1 1 0.27 0.42 23 -2.72 62.45 42 6.86 Yes 47 2.26 Yes 0 0 No -41 0.4 No 29 52.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 61570578 - NM_013402 FADS1 1 0.1 0.17 11 2.28 0 9 3.87 No 8 2.39 Yes 0 0 No -36 0.84 Yes 34 83.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61570661 - NM_013402 FADS1 1 0.1 0.17 9 6.9 83.31 16 5.29 No 3 1.35 Yes 0 0 No -29 0.44 No 41 83.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 61575781 - NM_013402 FADS1 1 0.3 0.38 19 4.42 84.17 27 5.2 No 73 -0.61 No 0 0 No -26 0.73 Yes 25 50.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 61575801 - NM_013402 FADS1 1 0.11 0.15 9 3.01 0 28 5.83 Yes 76 1.44 Yes 0 0 No -27 0.56 No 45 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 61577015 - NM_013402 FADS1 1 0.48 0.51 29 7.14 85.96 42 7.33 Yes 29 1.47 Yes 0 0 No -27 0.52 No 29 81.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 61608549 + NM_001281501 FADS2 1 0.03 0.15 10 3.01 0 34 5.74 Yes 49 1.12 Yes 0 0 No -29 0.78 Yes 41 80.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61611150 + NM_001281501 FADS2 1 0.18 0.93 38 2.91 83.57 31 5.74 Yes 26 0.77 Yes 0 0 No -30 0.52 No 40 78.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 61611175 + NM_001281501 FADS2 1 0.24 1.17 46 5.15 90.14 28 4.94 No 3 0.79 Yes 0 0 No -27 0.44 No 15 77.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 61615292 + NM_001281501 FADS2 1 0.03 0.15 11 5.48 84.6 35 6.41 Yes 12 1.29 Yes 24 0.7 Yes -24 0.63 No 36 92.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 61616152 + NM_001281501 FADS2 1 0.22 0.99 47 8.93 97.52 34 6 Yes 55 -1.36 No 24 0.5 Yes -24 0.74 Yes 46 68.47 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 61617220 + NM_001281501 FADS2 1 0.8 3.68 69 5.03 59.72 41 8.25 Yes 39 -2.06 No 29 0.4 Yes -40 0.36 No 30 41.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 61617747 + NM_001281501 FADS2 1 0.2 0.92 42 2.56 0 42 7.11 Yes 29 1.06 Yes 0 0 No -44 0.69 Yes 26 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61618103 + NM_001281501 FADS2 1 0.03 0.14 8 7.87 87.79 24 7.96 Yes 11 0.55 No 0 0 No -28 0.84 Yes 42 84.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61618217 + NM_001281501 FADS2 1 0.09 0.43 21 9.15 90.36 27 5.48 No 34 -2.12 No 0 0 No -26 0.74 Yes 44 64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 61624880 + NM_001281501 FADS2 1 0.02 0.13 8 7.42 82.47 38 6.38 Yes 2 1.19 Yes 0 0 No -37 0.83 Yes 33 76.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61625205 + NM_001281501 FADS2 1 0.05 0.21 12 6.2 84.1 22 5.2 No 9 0.64 No 0 0 No -21 0.86 Yes 49 75.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61626549 + NM_001281501 FADS2 1 0.14 0.47 29 4.83 87.5 35 8.59 Yes 19 0.89 Yes 0 0 No -34 0.89 Yes 36 84.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61643476 - NM_021727 FADS3 1 1.87 0.44 21 6.73 89.66 38 5.49 No NA NA NA 26 0.07 Yes -15 0.25 No 42 45.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 61646068 - NM_021727 FADS3 1 0.55 0.13 7 4.63 81.52 44 5.71 Yes 49 0.93 Yes 21 0.44 Yes -26 0.71 Yes 44 72.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 51032902 - NM_007051 FAF1 1 0.05 0.13 7 -0.34 77.41 27 4.92 No 66 0.8 Yes 0 0 No -26 0.91 Yes 44 92.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 51049340 - NM_007051 FAF1 1 0.08 0.17 10 4.32 78.63 28 5.33 No 38 -2.73 No 0 0 No -27 0.76 Yes 43 60.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 51049382 - NM_007051 FAF1 1 0.11 0.22 12 0.75 0 9 3.87 No 63 0.5 No 0 0 No -54 0.65 No 16 67.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 51049400 - NM_007051 FAF1 1 0.09 0.21 13 1.04 0 58 8.09 Yes 45 0.37 No 26 0.03 Yes -36 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 51049412 - NM_007051 FAF1 1 0.09 0.18 11 1.96 0 46 7.4 Yes 68 0.36 No 26 0.03 Yes -24 0.55 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 51054183 - NM_007051 FAF1 1 0.09 0.11 8 11.06 83.6 43 5.12 No 54 -1 No 0 0 No -36 0.59 No 30 60.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 51072615 - NM_007051 FAF1 1 0.46 0.67 35 6.9 70.84 36 6.26 Yes 67 0.57 No 0 0 No -36 0.55 No 37 75.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 51075387 - NM_007051 FAF1 1 0.43 0.61 26 9.65 88.81 31 5.47 No 52 0.4 No 0 0 No -23 0.75 Yes 47 80.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 51099229 - NM_007051 FAF1 1 0.45 0.64 36 10.61 91.78 13 5.53 No 0 0.74 No 0 0 No -24 0.36 No 42 58.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 51111497 - NM_007051 FAF1 1 0.36 0.5 29 10.67 87.44 45 7.16 Yes 32 1.52 Yes 0 0 No -34 0.92 Yes 36 76.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 51199909 - NM_007051 FAF1 1 0.51 1.19 46 7.2 86.34 18 5.13 No 2 0.53 No 0 0 No -25 0.63 No 45 51.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 51210946 - NM_007051 FAF1 1 0.12 0.11 8 7.12 90.14 28 5.83 Yes 23 0.33 No 0 0 No -27 0.65 No 35 35.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 51218196 - NM_007051 FAF1 1 0.37 0.42 20 3.18 72.24 17 5.53 No 4 0.69 No 0 0 No -25 0.84 Yes 45 78.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 51246717 - NM_007051 FAF1 1 3.16 3.26 68 7.02 80.96 31 6.02 Yes 5 1.27 Yes 0 0 No -30 0.95 Yes 40 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 51320090 - NM_007051 FAF1 1 0.14 0.18 12 6.34 72.85 35 7.51 Yes 22 2.1 Yes 0 0 No -34 0.9 Yes 36 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 51320161 - NM_007051 FAF1 1 0.39 0.51 26 8.19 91.88 23 5.33 No 30 1.43 Yes 0 0 No -22 0.93 Yes 48 94.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 51400021 - NM_007051 FAF1 1 0.38 0.28 16 4.15 80.39 23 3.96 No 23 -2.01 No 0 0 No -23 0.58 No 47 80.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 51424784 - NM_007051 FAF1 1 0.54 0.39 23 8.57 83.2 28 6.11 Yes 23 0.73 No 0 0 No -27 0.77 Yes 43 50.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 175879240 + NM_014613 FAF2 1 0.74 0.88 38 4.87 85.02 17 6.86 Yes 4 1.21 Yes 0 0 No -27 0.57 No 54 74.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 175880078 + NM_014613 FAF2 1 0.08 0.1 7 5.54 80.75 17 5.15 No 42 0.56 No 0 0 No -26 0.72 Yes 44 72.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 175880097 + NM_014613 FAF2 1 0.34 0.43 25 8.79 91.03 22 4.51 No 61 0.55 No 0 0 No -21 0.9 Yes 49 92.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 175880176 + NM_014613 FAF2 1 0.36 0.43 24 1.37 78.35 22 4.2 No 12 0.18 No 0 0 No -21 0.61 No 49 81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 175910078 + NM_014613 FAF2 1 0.13 0.19 13 0.4 82.6 30 6.07 Yes 53 0.57 No 0 0 No -29 0.81 Yes 41 86.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 175912749 + NM_014613 FAF2 1 0.18 0.24 15 9.5 88.27 35 5.68 Yes 22 1.22 Yes 0 0 No -34 0.95 Yes 36 96.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 175933757 + NM_014613 FAF2 1 0.13 0.25 14 3.37 0 22 8.77 Yes 9 1.77 Yes 32 0.9 Yes -21 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 80445700 + NM_000137 FAH 1 1.15 0.78 34 9.18 89.49 25 4.9 No 37 1.22 Yes 0 0 No -24 0.84 Yes 46 87.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 80445750 + NM_000137 FAH 1 0.25 0.18 10 5.46 84.96 25 4.93 No 62 0.99 Yes 0 0 No -30 0.38 No 40 32.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 80464503 + NM_000137 FAH 1 0.25 0.19 12 5.13 88.43 16 4.67 No 22 1.19 Yes 0 0 No -34 0.54 No 36 55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 80474108 + NM_000137 FAH 1 0.17 0.14 9 -0.83 81.44 22 4.84 No 60 0.94 Yes 0 0 No -28 0.82 Yes 42 89.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 80476159 + NM_000137 FAH 1 0.24 0.17 11 12.18 91.11 19 5.91 Yes 6 1.18 Yes 0 0 No -18 0.65 No 52 70.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 96071024 + NM_016044 FAHD2A 1 56.01 11.79 72 5.43 76.71 35 5.43 No 22 0.79 Yes 25 0.89 Yes -28 0.88 Yes 42 84.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 96071027 + NM_016044 FAHD2A 1 7.87 1.75 60 0.43 70.58 38 5.62 Yes 25 0.78 Yes 0 0 No -31 0.86 Yes 39 83.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 96078444 + NM_016044 FAHD2A 1 0.47 0.19 13 6.06 89.5 27 5.37 No 33 1.56 Yes 0 0 No -26 0.75 Yes 44 76.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97751509 - NM_001320848 FAHD2B 1 0.64 0.13 7 -4.7 54.96 22 5 No 45 -3.11 No 0 0 No -21 0.87 Yes 49 47.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 130712870 - NM_001035254 FAM102A 1 0.28 0.21 12 4.63 75.17 22 5.59 Yes 9 -1.14 No 0 0 No -26 0.47 No 44 57.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 130715599 - NM_001035254 FAM102A 1 0.15 0.11 7 11.65 95.48 28 5.83 Yes 74 -3.64 No 0 0 No -27 0.62 No 43 50.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 130726107 - NM_001035254 FAM102A 1 1.28 0.82 37 8.5 83.9 26 5.87 Yes 76 1.39 Yes 0 0 No -25 0.75 Yes 45 66.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 130741649 - NM_001035254 FAM102A 1 1.03 0.63 30 9.23 84.58 37 6.56 Yes 24 0.54 No 0 0 No -36 0.87 Yes 34 89.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 109152706 + NM_001010883 FAM102B 1 0.52 0.11 7 5.46 76.88 28 5.93 Yes 76 -5.37 No 0 0 No -33 0.51 No 37 46.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 109171274 + NM_001010883 FAM102B 1 0.33 0.1 7 1.5 55.3 39 5.33 No 61 0.42 No 29 0.44 Yes -38 0.77 Yes 32 84.33 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 83655221 + NM_031452 FAM103A1 1 0.35 0.56 28 6.38 74.96 19 6.93 Yes 6 1.33 Yes 0 0 No -32 0.42 No 52 80.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 83655852 + NM_031452 FAM103A1 1 0.41 0.64 33 9.41 91.79 18 7 Yes 5 1.27 Yes 0 0 No -17 0.51 No 53 81.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 14565551 - NM_001320738 FAM107B 1 0.1 0.44 22 10.69 87.56 21 5 No 73 -4.61 No 0 0 No -21 0.46 No 49 44.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 14572186 - NM_001320738 FAM107B 1 1.67 6.9 71 7.39 78.39 30 5.79 Yes 17 0.61 No 29 0.77 Yes -29 0.85 Yes 41 90.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 14572511 - NM_001320738 FAM107B 1 0.29 0.26 15 3.91 0 20 4.99 No 7 1.23 Yes 0 0 No -29 0.64 No 36 66.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 14580593 - NM_001320738 FAM107B 1 0.53 0.61 23 3.04 82.85 23 4.99 No 45 -1.4 No 0 0 No -22 0.68 Yes 48 81.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 14584686 - NM_001320738 FAM107B 1 0.25 0.24 12 -3.55 74.55 28 5.05 No 0 0.64 No 27 0.76 Yes -27 0.77 Yes 43 71.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 58912871 + NM_001312911 FAM111A 1 0.83 0.64 34 8.81 84.46 16 6.08 Yes 71 -3.43 No 0 0 No -23 0.89 Yes 47 95.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 58874922 + NM_198947 FAM111B 1 0.09 0.11 7 8.52 79.55 22 6.48 Yes 9 1.15 Yes 0 0 No -21 0.63 No 49 71.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 58877066 + NM_198947 FAM111B 1 0.16 0.11 7 1.06 68.7 35 6.62 Yes 22 0.52 No 0 0 No -29 0.72 Yes 41 81.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 58890830 + NM_198947 FAM111B 1 0.54 0.97 38 6.27 75.56 20 5.42 No 7 0.89 Yes 0 0 No -28 0.51 No 51 65.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 58892144 + NM_198947 FAM111B 1 0.09 0.18 12 9.6 85.17 46 8.78 Yes 3 0.29 No 0 0 No -25 0.8 Yes 45 74.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 153410210 - NM_001317994 FAM114A2 1 0.16 0.11 7 2.71 79.87 25 7.4 Yes 12 0.38 No 0 0 No -24 0.9 Yes 46 90.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 153414507 - NM_001317994 FAM114A2 1 3.81 0.69 36 6.11 77.87 19 5.43 No -2 0.4 No 26 0.89 Yes -26 0.68 Yes 47 58.18 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 153417016 - NM_001317994 FAM114A2 1 1.94 0.4 20 11.04 90.83 24 5 No 11 0.64 No 0 0 No -23 0.93 Yes 47 97.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 47793331 - NM_030802 FAM117A 1 0.27 0.24 15 7.48 79.59 28 4.42 No 38 1.14 Yes 0 0 No -28 0.79 Yes 42 84.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 45719052 + NM_001104595 FAM118A 1 6.8 1.54 48 6.78 76.45 32 8.18 Yes 19 1.48 Yes 34 0.82 Yes -31 0.72 Yes 45 71.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 45723729 + NM_001104595 FAM118A 1 0.35 0.11 8 1.1 0 15 3.93 No 18 1.81 Yes 0 0 No -30 0.85 Yes 40 81.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 45728416 + NM_001104595 FAM118A 1 0.95 0.17 10 3.34 62.48 33 6.18 Yes 5 -1.35 No 0 0 No -32 0.76 Yes 38 80.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 45733714 + NM_001104595 FAM118A 1 2.02 0.72 30 7.67 87.31 19 5 No 45 0.67 No 18 0.67 Yes -18 0.85 Yes 52 85.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 126103585 + NM_024556 FAM118B 1 0.17 0.14 7 -3.46 66.99 54 6.44 Yes 41 1.87 Yes 0 0 No -40 0.39 No 21 57.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 126111489 + NM_024556 FAM118B 1 0.6 0.46 23 7 92.4 57 7.39 Yes 44 0.88 Yes 0 0 No -25 0.45 No 37 37.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 126115285 + NM_024556 FAM118B 1 0.46 0.35 17 8.14 81.31 22 5.83 Yes 9 0.76 No 0 0 No -21 0.8 Yes 49 88.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 126124153 + NM_024556 FAM118B 1 0.68 0.43 21 8.24 80.17 36 6 Yes 0 0.52 No 0 0 No -35 0.6 No 35 80.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 126124161 + NM_024556 FAM118B 1 0.28 0.18 9 -3.81 0 14 4.07 No 31 0.07 No 31 0.2 Yes -43 0.49 No 27 62.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 126127883 + NM_024556 FAM118B 1 0.68 0.26 14 2.4 82.3 33 4.51 No 60 0.86 Yes 0 0 No -32 0.6 No 38 79.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 126131322 + NM_024556 FAM118B 1 37.13 13.85 72 5.1 89.73 32 4.39 No 6 1.79 Yes 28 0.87 Yes -24 0.61 No 46 71.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 126131745 + NM_024556 FAM118B 1 0.38 0.26 13 5.65 79.48 25 5.55 No 65 -2.13 No 0 0 No -25 0.85 Yes 45 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 96232610 + NM_014612 FAM120A 1 0.25 0.71 35 5.07 89.25 21 4.77 No 12 0.07 No 0 0 No -20 0.94 Yes 50 95.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 96236514 + NM_014612 FAM120A 1 0.19 0.85 36 5.78 82.73 27 5.2 No 50 1.2 Yes 0 0 No -26 0.76 Yes 44 74.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 96256572 + NM_014612 FAM120A 1 0.02 0.1 7 10.24 93.31 27 10.14 Yes 14 0.42 No 0 0 No -26 0.95 Yes 44 96.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 96261050 + NM_014612 FAM120A 1 0.08 0.38 21 1.02 73.04 26 5.38 No -2 0.37 No 27 0.85 Yes -22 0.46 No 49 43.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 96261076 + NM_014612 FAM120A 1 0.1 0.43 25 3.16 0 33 4.57 No 24 0.84 Yes 0 0 No -32 0.94 Yes 38 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 96277951 + NM_014612 FAM120A 1 0.12 0.39 20 1.79 70.14 41 5.02 No 17 0.94 Yes 0 0 No -40 0.68 Yes 30 85.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 96263331 + NM_014612 FAM120A 1 0.07 0.22 11 6.8 86.43 36 6.05 Yes 23 0.82 Yes 0 0 No -30 0.37 No 50 70.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 96264200 + NM_014612 FAM120A 1 0.09 0.31 20 1.94 71.29 52 5.47 No 23 0.78 Yes 0 0 No -35 0.47 No 21 72.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 96266177 + NM_014612 FAM120A 1 0.15 0.49 25 6.68 83.62 33 4.57 No 26 -3.85 No 0 0 No -29 0.42 No 50 38.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 96266999 + NM_014612 FAM120A 1 0.25 0.81 33 2.17 78.57 49 6.38 Yes 36 0.56 No 0 0 No -48 0.58 No 22 81.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 96277951 + NM_014612 FAM120A 1 23.38 76.78 72 1.79 70.14 41 5.02 No 17 0.94 Yes 0 0 No -40 0.68 Yes 30 85.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 96285561 + NM_014612 FAM120A 1 3.67 10.51 72 9.74 86.01 23 5.11 No 40 1.59 Yes 22 0.58 Yes -22 0.81 Yes 48 71.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 96290271 + NM_014612 FAM120A 1 0.08 0.28 18 2.51 72.29 32 4.79 No 12 0.41 No 0 0 No -24 0.64 No 41 42.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 96292992 + NM_014612 FAM120A 1 0.4 1.07 43 10.47 98.91 18 5.13 No 67 0.86 Yes 23 0.91 Yes -23 0.84 Yes 47 87.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 96295264 + NM_014612 FAM120A 1 0.05 0.19 11 9.38 83.81 30 4.45 No 49 0.42 No 0 0 No -24 0.59 No 51 45.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 96314388 + NM_014612 FAM120A 1 0.5 1.69 54 9.74 84.22 28 4.65 No 73 -1.25 No 0 0 No -26 0.62 No 35 65.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 96315616 + NM_014612 FAM120A 1 0.07 0.25 16 8.16 83.16 24 5.6 Yes 22 1.13 Yes 0 0 No -24 0.69 Yes 46 57.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 96318640 + NM_014612 FAM120A 1 0.07 0.24 16 5.99 80.44 26 5 No 50 0.58 No 32 0.5 Yes -25 0.78 Yes 45 72.37 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 96323393 + NM_014612 FAM120A 1 13.98 25.43 72 -18.6 73.69 43 5.53 No 76 0.58 No 0 0 No -37 0.66 No 33 89.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 96324967 + NM_014612 FAM120A 1 0.07 0.21 14 4.74 84.41 57 7.55 Yes 61 1.47 Yes 0 0 No -50 0.82 Yes 20 87.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 96324991 + NM_014612 FAM120A 1 0.04 0.13 9 3.94 84.95 27 5.2 No 14 -0.39 No 0 0 No -26 0.46 No 14 8.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 96210698 - NR_136229 FAM120AOS 1 0.31 0.22 14 8.43 87.6 22 5.74 Yes 24 1.2 Yes 0 0 No -21 0.8 Yes 49 83.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 96210772 - NR_136229 FAM120AOS 1 33.4 27.18 72 7.86 79.87 63 9.37 Yes 50 1.66 Yes 26 0.72 Yes -26 0.91 Yes 44 91.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 170680622 + NM_032448 FAM120B 1 0.13 0.1 7 -0.47 67.22 48 5.97 Yes 57 1.04 Yes 0 0 No -47 0.52 No 23 70.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 170684718 + NM_032448 FAM120B 1 0.22 0.11 7 -0.45 80.13 23 5.06 No -2 0.52 No 0 0 No -22 0.6 No 48 60.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 170684721 + NM_032448 FAM120B 1 0.42 0.24 15 1.4 77.14 26 5.34 No 1 0.48 No 0 0 No -25 0.56 No 45 65.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 170704578 + NM_032448 FAM120B 1 0.21 0.1 7 -8.55 0 30 6.32 Yes 17 1.42 Yes 0 0 No -29 0.61 No 41 83.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 170709544 + NM_032448 FAM120B 1 0.25 0.11 7 10.06 93.03 36 6.31 Yes 23 0.68 No 0 0 No -35 0.86 Yes 35 83.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 133906309 - NM_001170757 FAM122B 1 1.06 0.26 16 3.72 0 47 6.58 Yes 34 1.07 Yes 0 0 No -30 0.95 Yes 40 96.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 133906314 - NM_001170757 FAM122B 1 399.65 89.93 72 9.24 88.43 42 6.25 Yes 29 1.09 Yes 25 0.85 Yes -25 0.96 Yes 45 96.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 133918108 - NM_001170757 FAM122B 1 0.14 0.14 9 3.84 88.76 24 5.74 Yes 11 1.7 Yes 0 0 No -29 0.41 No 41 64.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 133919978 - NM_001170757 FAM122B 1 76.76 58.13 72 5.79 82.05 106 7.9 Yes 20 0.6 No 29 0.88 Yes -32 0.88 Yes 38 96.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 133942134 + NM_001170779 FAM122C 1 2.26 0.29 17 7.11 86.45 44 4.55 No 31 1.34 Yes 22 0.79 Yes -22 0.56 No 48 61.48 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 133943216 + NM_001170779 FAM122C 1 21.49 2.64 60 7.82 85.05 32 7.31 Yes 19 1.63 Yes 31 0.86 Yes -31 0.57 No 39 80.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 133955356 + NM_001170779 FAM122C 1 27.36 3.15 68 8.66 91.45 34 5.09 No 37 1.07 Yes 29 0.65 Yes -29 0.42 No 41 57.8 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 133955498 + NM_001170779 FAM122C 1 3.18 0.35 19 12.39 92.05 35 6.32 Yes 22 0.77 Yes 0 0 No -26 0.58 No 44 68.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 22985774 - NM_032581 FAM126A 1 0.15 0.17 8 -5.63 0 12 4.24 No 20 0.94 Yes 0 0 No -36 0.63 No 34 79.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 22986867 - NM_032581 FAM126A 1 0.52 0.69 33 8.87 77.56 59 7.27 Yes 46 1.47 Yes 34 0.76 Yes -34 0.5 No 36 52.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 23000668 - NM_032581 FAM126A 1 0.12 0.18 13 1.49 76.19 32 6.19 Yes 61 0.88 Yes 0 0 No -31 0.64 No 39 84.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 23017956 - NM_032581 FAM126A 1 0.17 0.32 15 4.93 80.88 20 5.74 Yes 7 0.48 No 0 0 No -19 0.74 Yes 51 89.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 23025355 - NM_032581 FAM126A 1 0.38 0.76 33 5.79 74.2 33 7.6 Yes 20 1.14 Yes 32 0.79 Yes -32 0.82 Yes 38 81.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 201849591 - NM_001321622 FAM126B 1 0.42 0.18 9 10.09 88.46 30 5.88 Yes 17 0.62 No 0 0 No -29 0.9 Yes 41 87.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 201852256 - NM_001321622 FAM126B 1 8.2 3.26 67 6.4 75.81 24 5.98 Yes 63 -4.64 No 23 0.81 Yes -23 0.58 No 43 72.28 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 201853164 - NM_001321622 FAM126B 1 0.4 0.24 12 3.13 66.27 18 5.95 Yes 74 -6.58 No 23 0.48 Yes -17 0.62 No 47 82.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 201881270 - NM_001321622 FAM126B 1 0.19 0.13 8 3.18 77.35 21 5.27 No 8 1.34 Yes 0 0 No -20 0.87 Yes 50 75.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 201886838 - NM_001321622 FAM126B 1 20.82 8.07 72 6.64 90.37 11 5 No 75 0.29 No 23 0.64 Yes -23 0.62 No 52 55.96 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 201888069 - NM_001321622 FAM126B 1 0.22 0.17 10 4.8 84.41 30 8.98 Yes 17 2.33 Yes 0 0 No -29 0.79 Yes 41 78.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 201888761 - NM_001321622 FAM126B 1 0.67 0.29 17 -0.25 83.86 27 4.4 No 14 0.72 No 0 0 No -26 0.91 Yes 44 92.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 201896366 - NM_001321622 FAM126B 1 1.47 0.58 29 2.33 0 30 6.4 Yes 17 0.65 No 0 0 No -29 0.83 Yes 41 87.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 201896370 - NM_001321622 FAM126B 1 0.23 0.1 7 0.8 83.04 26 6.08 Yes 13 0.67 No 0 0 No -25 0.86 Yes 45 86.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 134185507 - NM_001134321 FAM127B 1 3.43 0.35 19 8.97 85.38 32 6.46 Yes NA NA NA 27 0.46 Yes -27 0.56 No 39 64.54 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 184760200 - NM_052966 FAM129A 1 0.28 0.36 17 8.06 89.34 22 6.94 Yes 9 1.22 Yes 21 0.85 Yes -21 0.78 Yes 49 70.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 184766728 - NM_052966 FAM129A 1 0.34 0.49 24 4.1 72.11 25 6.18 Yes 74 1.56 Yes 0 0 No -28 0.85 Yes 42 87.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 184837845 - NM_052966 FAM129A 1 0.38 0.63 32 8.06 91.98 39 5.75 Yes 6 1.39 Yes 0 0 No -30 0.33 No 40 44.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 184844877 - NM_052966 FAM129A 1 0.23 0.35 19 12.24 92.97 73 10.17 Yes 60 1.61 Yes 0 0 No -32 0.84 Yes 43 62.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 184845305 - NM_052966 FAM129A 1 0.07 0.13 7 0.78 83.92 46 5.36 No 33 1.28 Yes 0 0 No -33 0.66 No 37 75.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 184863365 - NM_052966 FAM129A 1 0.06 0.1 7 5.94 78.73 30 5.74 Yes 54 1.16 Yes 28 0.76 Yes -29 0.76 Yes 41 84.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 184933814 - NM_052966 FAM129A 1 0.56 0.51 24 11.35 81.64 25 7.35 Yes 76 -0.34 No 0 0 No -24 0.71 Yes 46 84.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 92193267 - NM_001288584 FAM133B 1 1.41 0.85 38 5.07 87.2 39 6.5 Yes 26 1.06 Yes 0 0 No -25 0.48 No 45 62.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 92206991 - NM_001288584 FAM133B 1 7.72 5.07 69 4.63 81.68 25 4.94 No 24 0.73 No 24 0.94 Yes -24 0.92 Yes 46 88.93 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 92206994 - NM_001288584 FAM133B 1 3.74 2.61 59 4.56 88.21 22 4.66 No 21 0.73 No 24 0.94 Yes -21 0.9 Yes 49 86.05 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 92207009 - NM_001288584 FAM133B 1 0.5 0.36 20 5.25 78.75 19 5.34 No 6 0.75 No 24 0.94 Yes -18 0.53 No 52 52.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 92207126 - NM_001288584 FAM133B 1 0.68 0.49 27 5.61 85.86 29 5.53 No 40 1.22 Yes 0 0 No -24 0.89 Yes 46 85.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 92207495 - NM_001288584 FAM133B 1 0.19 0.17 10 0.48 79.38 33 5.9 Yes 30 0.64 No 0 0 No -28 0.87 Yes 42 79.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 92208705 - NM_001288584 FAM133B 1 0.48 0.38 18 -5.46 0 50 8.04 Yes 49 0.46 No 0 0 No -35 0.4 No 21 69.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 220044888 + NM_001321110 FAM134A 1 0.29 0.25 15 -0.99 0 11 4.12 No 57 0.21 No 20 0.95 Yes -20 0.48 No 50 81.45 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 220044919 + NM_001321110 FAM134A 1 3.71 3.46 70 5.71 81.87 21 5 No -3 0.87 Yes 20 0.95 Yes -20 0.82 Yes 50 72.01 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40734283 - NM_178126 FAM134C 1 0.19 0.29 17 -2.59 0 12 3.87 No 20 0.98 Yes 0 0 No -28 0.93 Yes 42 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40734802 - NM_178126 FAM134C 1 0.59 0.76 36 3.62 87.5 26 5.65 Yes 47 1.48 Yes 0 0 No -25 0.66 Yes 45 69.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 40735659 - NM_178126 FAM134C 1 0.1 0.19 11 5.94 79.53 18 5.36 No 5 1.18 Yes 0 0 No -43 0.41 No 27 64.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40738932 - NM_178126 FAM134C 1 0.25 0.31 16 8.89 82.48 19 6.32 Yes 6 1.06 Yes 26 0.93 Yes -18 0.73 Yes 52 81.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40742521 - NM_178126 FAM134C 1 0.49 0.78 39 9.63 87.08 22 5.74 Yes 9 1.15 Yes 0 0 No -21 0.75 Yes 49 70.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40748646 - NM_178126 FAM134C 1 3.89 4.81 71 6.73 78.4 30 4.16 No 33 0.91 Yes 21 0.69 Yes -27 0.4 No 49 35.1 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 71126982 + NM_001330999 FAM135A 1 13.99 5.04 70 9.23 94.37 36 4.4 No 20 0.2 No 0 0 No -30 0.5 No 40 49.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 71128077 + NM_001330999 FAM135A 1 0.36 0.15 10 4.15 84.95 26 5.1 No 45 0.49 No 25 0.9 Yes -25 0.44 No 45 79.39 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 71136272 + NM_001330999 FAM135A 1 5.9 2.28 59 5.9 77.94 27 5.57 Yes 14 0.87 Yes 27 0.68 Yes -27 0.53 No 43 63.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 71139699 + NM_001330999 FAM135A 1 0.26 0.15 10 4.88 77.01 54 7.42 Yes 66 1.65 Yes 0 0 No -19 0.53 No 51 83.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 71144829 + NM_001330999 FAM135A 1 0.36 0.18 12 11.01 88.27 75 9.31 Yes 69 -2.23 No 0 0 No -26 0.19 No 44 36.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 71162195 + NM_001330999 FAM135A 1 0.2 0.11 7 -10.35 0 26 8.41 Yes 13 1.34 Yes 0 0 No -25 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 71185161 + NM_001330999 FAM135A 1 1.72 0.79 37 6.48 86.58 17 4.13 No 32 0.92 Yes 24 0.79 Yes -24 0.72 Yes 51 73.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 71186995 + NM_001330999 FAM135A 1 3.91 2.57 64 10.52 84.26 34 6.86 Yes 33 0.74 No 33 0.7 Yes -26 0.64 No 40 55.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 71198891 + NM_001330999 FAM135A 1 0.29 0.1 7 10.59 96.69 28 6.24 Yes 15 1.97 Yes 0 0 No -27 0.62 No 43 81.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 71219139 + NM_001330999 FAM135A 1 0.3 0.18 12 2.12 75.96 21 6.31 Yes 73 1.79 Yes 0 0 No -20 0.59 No 50 52.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 71246659 + NM_001330999 FAM135A 1 0.5 0.13 9 13.37 92.63 24 8.24 Yes 11 0.85 Yes 0 0 No -23 0.38 No 44 45.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 71259149 + NM_001330999 FAM135A 1 0.91 0.22 12 0.53 64.81 49 6.98 Yes 31 0.2 No 0 0 No -30 0.35 No 33 39.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 71269423 + NM_001330999 FAM135A 1 1.16 0.32 15 0.41 0 34 7.58 Yes 21 1.21 Yes 0 0 No -33 0.76 Yes 37 89.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 70528736 - NM_032822 FAM136A 1 6.5 9 72 10.01 83.82 19 7.15 Yes 6 0.93 Yes 18 0.83 Yes -18 0.9 Yes 52 84.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137282001 - NM_001101801 FAM13B 1 165.47 58.67 72 9.14 89.5 22 8.18 Yes 61 1.1 Yes 29 0.47 Yes -29 0.76 Yes 41 61.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 137283866 - NM_001101801 FAM13B 1 0.45 0.17 10 6.47 85.05 20 5.15 No 11 0.57 No 0 0 No -23 0.66 Yes 47 61.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 137284784 - NM_001101801 FAM13B 1 1.49 2.06 61 5.01 79.61 23 5.08 No 57 1.1 Yes 0 0 No -23 0.58 No 47 63.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 137287341 - NM_001101801 FAM13B 1 0.14 0.19 10 2.87 0 34 7.93 Yes 57 -3.16 No 0 0 No -34 0.33 No 36 45.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 137288423 - NM_001101801 FAM13B 1 0.11 0.13 8 -5.87 0 15 3.49 No 12 0.92 Yes 26 0.87 Yes -29 0.83 Yes 41 90.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137289179 - NM_001101801 FAM13B 1 0.18 0.22 13 1.05 66.39 13 5.74 Yes 74 0.05 No 28 0.93 Yes -26 0.8 Yes 44 78.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137290046 - NM_001101801 FAM13B 1 2.1 0.32 17 3.86 76.5 25 5.19 No 68 1.22 Yes 0 0 No -24 0.62 No 46 67.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 137298866 - NM_001101801 FAM13B 1 0.13 0.17 11 7.09 0 17 4.58 No 4 0.78 Yes 0 0 No -16 0.7 Yes 54 72.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137303902 - NM_001101801 FAM13B 1 0.36 0.51 25 3.06 0 25 7.93 Yes 12 1.68 Yes 0 0 No -28 0.63 No 42 68.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 137314161 - NM_001101801 FAM13B 1 0.22 0.29 16 -0.2 51.97 54 7.83 Yes 41 1.31 Yes 0 0 No -53 0.94 Yes 17 96.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137353776 - NM_001101801 FAM13B 1 0.23 0.17 11 3.26 72.51 25 5.01 No 2 0.47 No 0 0 No -28 0.69 Yes 42 86.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 137354836 - NM_001101801 FAM13B 1 459.27 71.75 72 8.29 89 36 5.87 Yes 26 0.66 No 35 0.52 Yes -35 0.52 No 40 50.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 74931956 + NM_173348 FAM149B1 1 2.01 0.5 26 5.72 75 36 5.96 Yes 9 0.58 No 0 0 No -35 0.42 No 35 50.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 74960610 + NM_173348 FAM149B1 1 1.23 0.36 21 5.35 77.3 29 5.65 Yes 16 0.49 No 0 0 No -28 0.7 Yes 42 60.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 74967623 + NM_173348 FAM149B1 1 3.82 1.03 41 7.54 99.45 20 5.62 Yes 42 1.99 Yes 0 0 No -23 0.5 No 47 46.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 74968454 + NM_173348 FAM149B1 1 6.82 2.08 52 4.84 72.98 32 5.49 No 19 0.54 No 0 0 No -31 0.93 Yes 39 95.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 74976272 + NM_173348 FAM149B1 1 0.97 0.31 15 2.65 70.23 54 5.89 Yes 66 0.7 No 0 0 No -56 0.44 No 17 56.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 74976272 + NM_173348 FAM149B1 1 17.87 5.4 72 2.65 70.23 54 5.89 Yes 66 0.7 No 0 0 No -56 0.44 No 17 56.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 74992806 + NM_173348 FAM149B1 1 0.5 0.15 10 7.32 79.13 26 4.69 No 47 -2.19 No 0 0 No -25 0.72 Yes 50 63.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 74993118 + NM_173348 FAM149B1 1 0.59 0.18 12 9.82 87.44 36 5.57 Yes 14 0.56 No 0 0 No -26 0.48 No 44 53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 74993608 + NM_173348 FAM149B1 1 0.47 0.14 7 6.98 81.82 21 4.6 No 1 0.65 No 0 0 No -20 0.45 No 50 64.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 6233207 - NM_032127 FAM160A2 1 1.1 0.28 16 10.49 86.48 39 6.92 Yes 32 0.92 Yes 0 0 No -38 0.75 Yes 32 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 6245891 - NM_032127 FAM160A2 1 3.98 0.57 34 5.23 82.09 23 5.74 Yes 10 1.22 Yes 0 0 No -22 0.92 Yes 48 90.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 116606850 + NM_020940 FAM160B1 1 0.31 0.24 15 -3.36 71.7 43 5.21 No 27 0.07 No 0 0 No -25 0.36 No 28 39.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 116624284 + NM_020940 FAM160B1 1 1.92 1.22 39 2.6 75.58 36 5.84 Yes 57 1.35 Yes 0 0 No -35 0.63 No 35 43.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 116624292 + NM_020940 FAM160B1 1 0.23 0.15 8 -1.07 0 13 4.12 No 65 1.34 Yes 0 0 No -43 0.61 No 27 35.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 21947271 + NM_022749 FAM160B2 1 7.03 0.88 39 7.97 82.54 40 10.15 Yes -3 0.6 No 39 0.4 Yes -39 0.49 No 31 40.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 21951252 + NM_022749 FAM160B2 1 1.48 0.18 11 4.54 0 36 5.71 Yes 43 0.08 No 0 0 No -45 0.48 No 25 41.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 21952120 + NM_022749 FAM160B2 1 8.93 2.1 61 -0.78 66.43 24 4.71 No 4 -1.1 No 0 0 No -23 0.76 Yes 47 78.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 21952141 + NM_022749 FAM160B2 1 0.73 0.15 10 -0.95 0 11 4.12 No 6 0.14 No 0 0 No -18 0.59 No 52 74.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 21955936 + NM_022749 FAM160B2 1 3.4 1.17 45 0.17 73.65 26 5.57 Yes 13 0.88 Yes 0 0 No -25 0.9 Yes 45 85.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 21957080 + NM_022749 FAM160B2 1 0.94 0.38 22 12.24 89.54 29 5.48 No 16 1.05 Yes 0 0 No -28 0.82 Yes 42 87.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 21959224 + NM_022749 FAM160B2 1 2.44 0.82 37 4.83 0 9 3.87 No -4 -0.1 No 0 0 No -34 0.55 No 36 82.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 21959486 + NM_022749 FAM160B2 1 11.09 3.32 69 11.95 91.58 20 6.17 Yes 57 -1.3 No 0 0 No -21 0.67 Yes 51 81.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 21959655 + NM_022749 FAM160B2 1 1.15 0.35 19 -3.21 0 15 4.24 No 2 0.44 No 32 0.2 Yes -14 0.77 Yes 56 86.48 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 21959706 + NM_022749 FAM160B2 1 0.36 0.1 7 6 81.06 20 4.17 No 53 0.77 Yes 0 0 No -53 0.35 No 17 42.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 62067661 - NM_001201543 FAM161A 1 15.55 1.86 53 5.77 78.19 14 5.14 No 1 0.91 Yes 20 0.8 Yes -20 0.91 Yes 50 94.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 122104307 + NM_014367 FAM162A 1 0.05 0.19 9 1.26 66.35 45 7.88 Yes 55 0.7 No 0 0 No -40 0.39 No 30 74.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 122106310 + NM_014367 FAM162A 1 0.09 0.28 18 6.17 90.82 24 5.1 No 60 1.27 Yes 0 0 No -23 0.67 Yes 47 71.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122112279 + NM_014367 FAM162A 1 0.21 0.72 32 11.64 88.89 28 6.38 Yes 15 1.33 Yes 0 0 No -27 0.84 Yes 43 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122120222 + NM_014367 FAM162A 1 0.99 3.21 66 8.96 97.38 13 5.1 No 68 0.18 No 23 0.46 Yes -25 0.4 No 47 63.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 122121610 + NM_014367 FAM162A 1 0.06 0.19 12 -0.15 0 52 7.73 Yes 15 0.58 No 0 0 No -27 0.54 No 19 52.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 73118725 - NM_001286050 FAM168A 1 1.03 0.38 18 8.7 79.41 29 5.65 Yes 16 0.63 No 24 0.75 Yes -28 0.95 Yes 42 95.68 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 73123349 - NM_001286050 FAM168A 1 1.36 0.39 20 7.78 84.46 30 6.42 Yes 2 0.87 Yes 0 0 No -29 0.77 Yes 41 78.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73217546 - NM_001286050 FAM168A 1 0.48 0.13 9 6.82 89.47 24 5.1 No 24 1.35 Yes 0 0 No -24 0.65 No 46 74.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 73284211 - NM_001286050 FAM168A 1 0.49 0.18 9 8.56 81.78 25 4.89 No 12 1.2 Yes 0 0 No -24 0.91 Yes 46 95.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73290567 - NM_001286050 FAM168A 1 0.48 0.17 10 9.3 85.59 32 8.08 Yes 13 1.62 Yes 0 0 No -25 0.73 Yes 45 77.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 131813019 - NM_001321748 FAM168B 1 0.16 0.35 21 -1.38 0 28 5.83 Yes 41 0.96 Yes 0 0 No -27 0.9 Yes 43 95.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 131815291 - NM_001321748 FAM168B 1 0.26 0.57 26 5.32 87.6 27 5.28 No 41 0.79 Yes 0 0 No -26 0.78 Yes 17 63.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 131815311 - NM_001321748 FAM168B 1 0.24 0.49 29 2.85 0 67 5.88 Yes 21 0.79 Yes 0 0 No -33 0.73 Yes 37 79.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 131824830 - NM_001321748 FAM168B 1 0.16 0.36 20 6.54 90.97 19 4.9 No 6 0.68 No 0 0 No -17 0.66 No 52 86.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 131824845 - NM_001321748 FAM168B 1 0.06 0.11 8 2.61 80.34 22 4.81 No 9 0.47 No 0 0 No -21 0.84 Yes 49 87.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 131829828 - NM_001321748 FAM168B 1 0.18 0.38 23 0.55 74.23 21 6.08 Yes 61 1.34 Yes 0 0 No -20 0.9 Yes 50 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 131829869 - NM_001321748 FAM168B 1 0.25 0.57 29 3.83 64.36 33 6.96 Yes 20 1.33 Yes 0 0 No -32 0.8 Yes 38 77.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 131837021 - NM_001321748 FAM168B 1 0.71 1.46 50 6.23 90.14 16 4.24 No 3 1.53 Yes 0 0 No -27 0.6 No 43 43.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 74100455 - NM_015566 FAM169A 1 0.72 0.32 16 3.96 79.79 26 5.97 Yes 73 1.56 Yes 28 0.84 Yes -25 0.45 No 45 47.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 93117650 - NM_032042 FAM172A 1 1.47 0.28 17 2.89 71.26 53 7.92 Yes 40 0.93 Yes 0 0 No -46 0.66 Yes 19 49.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 93141627 - NM_032042 FAM172A 1 2.62 0.83 40 3.88 83.28 24 5 No 73 -2.67 No 0 0 No -23 0.85 Yes 47 77.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 93150938 - NM_032042 FAM172A 1 1.86 0.57 27 10.94 97.38 22 7.75 Yes 9 1.41 Yes 0 0 No -21 0.7 Yes 49 68.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 93173121 - NM_032042 FAM172A 1 4.59 1.14 46 8.24 91.27 31 6 Yes 33 0.02 No 0 0 No -31 0.45 No 39 56.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 93201929 - NM_032042 FAM172A 1 2.76 0.6 27 8.07 90.45 25 9.04 Yes 12 1.8 Yes 0 0 No -24 0.51 No 39 58.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 93231011 - NM_032042 FAM172A 1 0.57 0.25 15 -0.89 70.18 46 8.29 Yes 33 1.5 Yes 0 0 No -45 0.82 Yes 25 91.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 93251766 - NM_032042 FAM172A 1 0.51 0.24 12 6.71 75.53 28 6.26 Yes 15 1.12 Yes 0 0 No -27 0.88 Yes 43 91.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 93303146 - NM_032042 FAM172A 1 0.3 0.1 7 13.48 92.05 38 7.81 Yes 25 1.38 Yes 0 0 No -37 0.64 No 33 61.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 93330210 - NM_032042 FAM172A 1 4.56 1.44 47 11.1 87.28 33 5.74 Yes 20 1.06 Yes 0 0 No -26 0.63 No 44 52.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 93330210 - NM_032042 FAM172A 1 1.15 0.35 21 11.1 87.28 33 5.74 Yes 20 1.06 Yes 0 0 No -26 0.63 No 44 52.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 93386535 - NM_032042 FAM172A 1 0.32 0.17 11 -6.09 85.94 36 5.92 Yes 40 -2.23 No 0 0 No -29 0.66 No 41 70.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 93388397 - NM_032042 FAM172A 1 0.68 0.38 19 8.26 87.71 25 5.16 No 23 0.71 No 0 0 No -24 0.53 No 46 63.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 93392909 - NM_032042 FAM172A 1 13.12 2.83 66 6.44 85.89 22 5.29 No 58 0.19 No 0 0 No -21 0.41 No 48 63.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 93392909 - NM_032042 FAM172A 1 2.48 0.56 25 6.44 85.89 22 5.29 No 58 0.19 No 0 0 No -21 0.41 No 48 63.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 93396054 - NM_032042 FAM172A 1 0.88 0.17 10 3.63 83.78 30 7 Yes 17 1.86 Yes 0 0 No -29 0.84 Yes 41 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 771817 + NM_001271285 FAM173A 1 0.13 0.11 8 6.25 77.88 22 5.1 No NA NA NA 0 0 No -21 0.48 No 20 37.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 772083 + NM_001271285 FAM173A 1 709.39 70.5 72 8.41 93.11 17 6.17 Yes 40 0.62 No 29 0.31 Yes -41 0.64 No 29 80.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 10227776 - NR_047670 FAM173B 1 1.52 0.69 33 2.62 57.01 35 4.81 No 12 2 Yes 25 0.67 Yes -24 0.48 No 46 69.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 10235849 - NR_047670 FAM173B 1 0.42 0.17 11 4.99 79.66 31 6 Yes 54 0.6 No 0 0 No -30 0.68 Yes 40 74.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 99872214 + NM_198507 FAM174A 1 0.48 0.18 11 5.66 81.9 29 6.09 Yes 16 0.29 No 0 0 No -28 0.94 Yes 42 93.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 99917050 + NM_198507 FAM174A 1 2.37 0.83 33 7.75 88.05 19 6.61 Yes 6 1.02 Yes 29 0.81 Yes -29 0.93 Yes 41 89.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 93171035 - NM_207446 FAM174B 1 0.27 0.1 7 4.03 81.07 32 6.06 Yes 69 1.64 Yes 0 0 No -22 0.43 No 48 28.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 93171200 - NM_207446 FAM174B 1 0.86 0.31 16 7.07 96.62 28 5.83 Yes 24 -1.36 No 0 0 No -27 0.78 Yes 43 74.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 93198203 - NM_207446 FAM174B 1 0.88 0.21 12 9.08 82.91 41 6.67 Yes 28 1.5 Yes 0 0 No -28 0.42 No 42 71.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84384559 - NM_001345962 FAM175A 1 0.95 0.28 17 5.25 76.79 27 5.2 No 42 0.98 Yes 0 0 No -54 0.64 No 16 80.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84385949 - NM_001345962 FAM175A 1 0.93 0.22 14 7.04 84.6 31 6.08 Yes 0 -0.63 No 0 0 No -30 0.48 No 40 63.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84388065 - NM_001345962 FAM175A 1 0.65 0.19 9 7.31 92.54 19 6.52 Yes 42 1.42 Yes 0 0 No -30 0.5 No 40 65.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84390293 - NM_001345962 FAM175A 1 0.53 0.11 7 4.52 0 15 4.58 No 48 1.66 Yes 0 0 No -60 0.4 No 40 64.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84402278 - NM_001345962 FAM175A 1 1.52 0.39 18 2.84 0 29 8.7 Yes 38 0.51 No 0 0 No -28 0.74 Yes 29 50.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84403394 - NM_001345962 FAM175A 1 0.85 0.11 7 0.72 0 40 6.73 Yes 35 0.29 No 0 0 No -42 0.52 No 43 66.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84405320 - NM_001345962 FAM175A 1 9.09 1.29 45 6.08 79.83 34 6.66 Yes 21 1.02 Yes 22 0.7 Yes -34 0.52 No 37 62.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 126495403 + NM_032182 FAM175B 1 1.92 1.06 38 -3.41 0 43 6.19 Yes 62 0.63 No 0 0 No -29 0.74 Yes 41 71.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 126501886 + NM_032182 FAM175B 1 0.37 0.35 20 2.54 75.39 23 4.8 No 19 1.15 Yes 0 0 No -22 0.7 Yes 43 61.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 126515167 + NM_032182 FAM175B 1 0.18 0.15 11 -1.58 0 20 5.77 Yes 7 0.79 Yes 0 0 No -31 0.74 Yes 39 76.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 126519921 + NM_032182 FAM175B 1 1.84 1.6 54 2.57 0 30 6.4 Yes 17 2.22 Yes 0 0 No -29 0.92 Yes 41 95.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 126523071 + NM_032182 FAM175B 1 0.28 0.25 15 -3.77 0 26 5.66 Yes 67 -3.26 No 0 0 No -23 0.68 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 35515992 + NM_001079519 FAM177A1 1 0.34 0.19 10 -1.57 0 33 7.07 Yes 20 1.41 Yes 0 0 No -32 0.9 Yes 38 93.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35519234 + NM_001079519 FAM177A1 1 0.63 0.38 22 0 83.57 20 4.55 No 7 1.46 Yes 31 0.83 Yes -27 0.88 Yes 43 96.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 35519238 + NM_001079519 FAM177A1 1 45.58 24.64 72 3.2 0 24 4.84 No 11 1.44 Yes 31 0.83 Yes -31 0.85 Yes 39 95.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 35520346 + NM_001079519 FAM177A1 1 0.26 0.11 7 2.22 83.57 20 3.83 No 70 1.21 Yes 0 0 No -29 0.47 No 42 56.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 35527789 + NM_001079519 FAM177A1 1 0.17 0.15 10 6.53 82.08 19 4.73 No 47 1.76 Yes 0 0 No -28 0.76 Yes 42 69.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35530753 + NM_001079519 FAM177A1 1 1.38 1.14 43 9.42 78.5 34 8.76 Yes 21 1.27 Yes 0 0 No -33 0.96 Yes 37 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35550231 + NM_001079519 FAM177A1 1 0.17 0.11 7 -3.56 0 25 8.56 Yes 12 0.52 No 0 0 No -24 0.64 No 35 60.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 45492705 + NR_131765 FAM179B 1 4.82 0.49 24 7.25 87.79 34 6.32 Yes 21 0.39 No 0 0 No -34 0.39 No 36 75.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 45516103 + NR_131765 FAM179B 1 13.64 1.99 62 6.55 80.24 19 5.39 No 31 0.19 No 0 0 No -24 0.68 Yes 46 46.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 102394238 + NM_001145268 FAM185A 1 0.37 0.11 8 8.02 81.2 31 5.5 No -1 0.11 No 0 0 No -28 0.25 No 48 39.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 102395044 + NM_001145268 FAM185A 1 0.45 0.15 9 5.89 81.89 41 5.75 Yes 28 1.16 Yes 0 0 No -28 0.62 No 42 75.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 102395048 + NM_001145268 FAM185A 1 0.45 0.14 8 -3.16 0 45 5.97 Yes 32 1.15 Yes 0 0 No -32 0.62 No 38 77.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 102403828 + NM_001145268 FAM185A 1 13.35 2.82 64 7.36 85.08 33 5.72 Yes 61 1 Yes 0 0 No -32 0.46 No 38 52.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 102410776 + NM_001145268 FAM185A 1 1.07 0.25 14 7.9 79.21 17 4.52 No 4 0.7 No 0 0 No -31 0.41 No 39 46.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 102419131 + NM_001145268 FAM185A 1 0.34 0.13 8 3.54 63.07 33 5.45 No 68 -5.94 No 0 0 No -20 0.69 Yes 42 49.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 102420159 + NM_001145268 FAM185A 1 1.55 0.53 27 1.81 83.86 24 5.32 No 11 0.38 No 27 0.68 Yes -28 0.68 Yes 47 62.8 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 102420163 + NM_001145268 FAM185A 1 3.06 1.07 44 3.04 0 28 5.66 Yes 15 0.36 No 27 0.68 Yes -32 0.68 Yes 43 67.47 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 15822966 - NM_001318330 FAM188A 1 1.39 0.88 36 9.43 88.08 23 4.96 No 44 1.13 Yes 0 0 No -22 0.51 No 48 55.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 15823662 - NM_001318330 FAM188A 1 0.58 0.36 22 10.38 92.97 35 6 Yes 54 0.15 No 0 0 No -37 0.68 Yes 33 75.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 15824218 - NM_001318330 FAM188A 1 0.17 0.11 8 -4.68 0 13 3.87 No 17 0.69 No 0 0 No -29 0.85 Yes 41 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 15828459 - NM_001318330 FAM188A 1 0.81 0.39 21 6.79 75.01 9 6.2 Yes -4 0.95 Yes 0 0 No -37 0.76 Yes 33 85.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 15880279 - NM_001318330 FAM188A 1 152.29 40.75 72 4.9 83.45 22 5 No 9 0.62 No 21 0.85 Yes -20 0.71 Yes 49 87.27 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 15880305 - NM_001318330 FAM188A 1 1.24 0.32 18 4.85 74.45 46 7.06 Yes 33 0.02 No 21 0.85 Yes -45 0.74 Yes 25 86.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 15881664 - NM_001318330 FAM188A 1 0.38 0.1 7 6.54 87.51 37 9.19 Yes 24 1.3 Yes 0 0 No -36 0.53 No 34 64.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 15883597 - NM_001318330 FAM188A 1 3.21 1.47 50 -0.72 82.06 26 6.01 Yes 74 1.94 Yes 0 0 No -26 0.66 No 44 61.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 15899967 - NM_001318330 FAM188A 1 0.79 0.29 19 7.1 79.59 32 7.68 Yes 19 1.05 Yes 0 0 No -31 0.61 No 39 76.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 155220325 - NM_006589 FAM189B 1 0.51 0.14 7 7.13 73.47 31 6 Yes 18 1.18 Yes 0 0 No -30 0.4 No 40 66.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155220473 - NM_006589 FAM189B 1 0.42 0.11 7 8.98 84.48 24 7.35 Yes NA NA NA 0 0 No -23 0.7 Yes 47 79.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155221700 - NM_006589 FAM189B 1 13.18 3.83 65 7.87 80.44 19 5.92 Yes 6 2.38 Yes 18 0.83 Yes -18 0.69 Yes 52 83.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155224327 - NM_006589 FAM189B 1 1.06 0.19 12 10.74 90.81 47 7.52 Yes NA NA NA 0 0 No -44 0.71 Yes 26 77.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57201133 - NM_024946 FAM192A 1 0.08 0.22 13 -10.68 0 27 5.23 No 0 0.69 No 26 0.83 Yes -8 0.43 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57201137 - NM_024946 FAM192A 1 0.15 0.44 20 -6.7 0 23 5.08 No -4 0.9 Yes 26 0.83 Yes -15 0.45 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 57201143 - NM_024946 FAM192A 1 0.71 2.14 60 -9.03 0 17 5.12 No -3 0.55 No 26 0.83 Yes -9 0.57 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57208199 - NM_024946 FAM192A 1 4.8 4.82 71 3.36 0 26 5.47 No 51 0.62 No 25 0.89 Yes -25 0.67 Yes 40 73.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57208601 - NM_024946 FAM192A 1 1.36 1.36 49 5.68 84.34 43 7.04 Yes 30 1.36 Yes 29 0.88 Yes -29 0.76 Yes 28 78.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57209613 - NM_024946 FAM192A 1 0.29 0.29 16 5.09 88.29 24 5.29 No 52 0.09 No 23 0.83 Yes -23 0.64 No 47 51.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57212445 - NM_024946 FAM192A 1 0.28 0.31 17 7.13 83.15 27 4.89 No 14 0.55 No 0 0 No -26 0.95 Yes 44 96.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57212765 - NM_024946 FAM192A 1 6.72 6.85 72 10.36 90.49 19 4.09 No 58 1.22 Yes 28 0.84 Yes -18 0.72 Yes 52 65.86 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 2640543 + NR_046335 FAM193A 1 1.41 0.69 36 5.59 76.57 34 4.24 No 15 0.53 No 0 0 No -27 0.47 No 37 67.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 2640579 + NR_046335 FAM193A 1 0.69 0.36 18 5.77 80.75 23 4.79 No 51 0.51 No 0 0 No -22 0.82 Yes 48 84.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 2644813 + NR_046335 FAM193A 1 0.15 0.1 7 6.5 82.81 25 5.73 Yes 12 1.34 Yes 0 0 No -24 0.92 Yes 46 92.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2646025 + NR_046335 FAM193A 1 0.14 0.1 7 6.36 95.17 16 5.2 No 37 -1.82 No 0 0 No -30 0.48 No 40 45.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 2648416 + NR_046335 FAM193A 1 0.32 0.22 15 5.07 0 27 5.48 No 51 1.46 Yes 0 0 No -24 0.78 Yes 46 83.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2649869 + NR_046335 FAM193A 1 2.38 1.49 52 5.5 85.19 24 8.6 Yes 11 1.32 Yes 0 0 No -23 0.94 Yes 47 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2650228 + NR_046335 FAM193A 1 0.93 0.58 33 6.99 83.12 31 7.2 Yes 18 1.54 Yes 0 0 No -30 0.65 No 40 87.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 2656754 + NR_046335 FAM193A 1 2.37 1.56 56 7.86 86.86 28 4.29 No -1 0.95 Yes 32 0.43 Yes -24 0.75 Yes 46 64.13 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 2656784 + NR_046335 FAM193A 1 4.6 2.86 67 10 79.38 33 6.24 Yes 29 0.94 Yes 32 0.43 Yes -32 0.76 Yes 38 56.32 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 2664570 + NR_046335 FAM193A 1 1.65 0.86 38 1.69 0 9 3.87 No 14 1.62 Yes 26 0.93 Yes -26 0.82 Yes 44 76.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2703523 + NR_046335 FAM193A 1 0.2 0.14 7 3.17 84.41 20 8.84 Yes 7 1 Yes 0 0 No -27 0.74 Yes 43 79.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2704994 + NR_046335 FAM193A 1 1.06 0.65 34 10.88 86.46 36 7.35 Yes 23 2.21 Yes 0 0 No -35 0.92 Yes 35 94.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2709872 + NR_046335 FAM193A 1 0.37 0.22 14 3.15 83.28 31 6.66 Yes 50 1.91 Yes 30 0.72 Yes -30 0.8 Yes 40 67.85 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 2721706 + NR_046335 FAM193A 1 0.29 0.15 11 10.14 86.73 25 7.42 Yes 12 1.48 Yes 24 0.89 Yes -24 0.94 Yes 46 93.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2722101 + NR_046335 FAM193A 1 0.31 0.15 11 9.69 87.66 30 6.32 Yes 42 0.82 Yes 0 0 No -29 0.75 Yes 41 81.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176950267 - NR_024019 FAM193B 1 1.86 0.67 34 4.95 77.18 17 6 Yes 4 1.43 Yes 29 0.39 Yes -16 0.66 No 54 79.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 176950308 - NR_024019 FAM193B 1 0.84 0.26 16 0.72 67.88 27 5 No 10 0.6 No 26 0.83 Yes -26 0.78 Yes 44 62.64 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 176959133 - NR_024019 FAM193B 1 20.53 0.97 46 2.7 75.9 29 5.63 Yes 72 1.28 Yes 28 0.9 Yes -28 0.91 Yes 42 93.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176963488 - NR_024019 FAM193B 1 3.89 1.85 55 6.11 78.98 26 5.3 No 13 -0.45 No 25 0.89 Yes -25 0.63 No 47 66.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 176965463 - NR_024019 FAM193B 1 1.39 0.97 41 8.51 80.36 37 6.03 Yes 47 0.91 Yes 0 0 No -19 0.37 No 42 61.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 103430802 + NM_207318 FAM199X 1 0.51 0.33 19 4.93 70.7 26 6 Yes 13 0.9 Yes 0 0 No -25 0.87 Yes 45 86.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 15686472 + NM_001145191 FAM200B 1 4.57 1.04 43 7.31 90.72 24 5 No 60 0.64 No 23 0.93 Yes -23 0.81 Yes 47 88.79 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 15686508 + NM_001145191 FAM200B 1 0.81 0.17 10 6.46 83.2 28 5.69 Yes 5 0.93 Yes 27 0.88 Yes -27 0.92 Yes 43 86.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 120081924 - NM_001134672 FAM204A 1 0.71 1.29 47 4.45 88.81 16 5.01 No 39 0.47 No 32 0.4 Yes -26 0.64 No 45 52.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 120082710 - NM_001134672 FAM204A 1 0.1 0.19 11 10.11 80.44 41 6.86 Yes 73 -2.24 No 0 0 No -40 0.67 Yes 30 78.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 120085752 - NM_001134672 FAM204A 1 1.2 2 61 4.26 0 29 5.44 No 16 0.37 No 0 0 No -28 0.64 No 42 82.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 120085752 - NM_001134672 FAM204A 1 0.22 0.38 18 4.26 0 29 5.44 No 16 0.37 No 0 0 No -28 0.64 No 42 82.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 120095933 - NM_001134672 FAM204A 1 3.57 1.08 43 0.5 76.55 20 9.27 Yes 52 0.9 Yes 0 0 No -31 0.75 Yes 39 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120101440 - NM_001134672 FAM204A 1 140.16 39.19 72 1.27 64.95 26 5.48 No 65 -3.06 No 25 0.9 Yes -25 0.87 Yes 45 61.97 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 120101461 - NM_001134672 FAM204A 1 1.26 0.35 21 2.69 79.05 11 4.8 No -2 0.65 No 25 0.9 Yes -21 0.35 No 60 40.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 46363633 + NM_058190 FAM207A 1 0.26 0.11 7 3.79 80.7 24 5.82 Yes 62 1.75 Yes 0 0 No -23 0.91 Yes 47 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 46375815 + NM_058190 FAM207A 1 0.88 0.76 30 5.72 85.82 33 5.27 No -1 0.48 No 0 0 No -22 0.77 Yes 48 81.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 46376629 + NM_058190 FAM207A 1 0.23 0.18 11 8.62 83.94 18 5.59 Yes -1 1.3 Yes 0 0 No -17 0.88 Yes 53 91.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 46389024 + NM_058190 FAM207A 1 0.2 0.26 16 7.46 79.84 56 7.52 Yes 5 1.73 Yes 35 0.4 Yes -43 0.32 No 35 56.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 46393114 + NM_058190 FAM207A 1 11.32 12.58 72 6.68 82.6 31 6.83 Yes 18 1.57 Yes 0 0 No -30 0.41 No 44 57.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 56657595 - NM_001112736 FAM208A 1 21.72 37.15 72 7.38 80.81 33 5.66 Yes 72 -3.02 No 22 0.48 Yes -33 0.38 No 37 43.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 56658986 - NM_001112736 FAM208A 1 0.13 0.17 11 5.38 74.78 22 5.84 Yes 9 0.15 No 0 0 No -30 0.53 No 40 55.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 56662660 - NM_001112736 FAM208A 1 0.14 0.22 15 4.6 66.88 29 5.03 No 1 -2.4 No 23 0.91 Yes -28 0.77 Yes 42 92.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 56667872 - NM_001112736 FAM208A 1 32.83 40 72 10.39 87.7 31 5.5 No 18 0.73 No 30 0.78 Yes -30 0.73 Yes 40 52.45 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 56667872 - NM_001112736 FAM208A 1 0.99 1.21 47 10.39 87.7 31 5.5 No 18 0.73 No 30 0.78 Yes -30 0.73 Yes 40 52.45 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 56671542 - NM_001112736 FAM208A 1 0.17 0.22 14 8.62 81.61 33 6.63 Yes 20 0.42 No 0 0 No -32 0.82 Yes 38 95.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 56672791 - NM_001112736 FAM208A 1 0.15 0.26 16 -14.48 80.17 22 5.6 Yes 9 1.34 Yes 0 0 No -21 0.89 Yes 49 83.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 56689949 - NM_001112736 FAM208A 1 0.12 0.22 13 7.75 76.93 21 5.54 No 8 1.32 Yes 0 0 No -26 0.52 No 41 51.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 56692929 - NM_001112736 FAM208A 1 0.47 0.79 32 2.91 0 36 7.35 Yes 23 2.09 Yes 0 0 No -35 0.97 Yes 35 95.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 56694861 - NM_001112736 FAM208A 1 0.06 0.13 8 -23.15 0 38 6.22 Yes 61 0.15 No 0 0 No -25 0.84 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 56694862 - NM_001112736 FAM208A 1 0.05 0.11 7 -13.11 0 37 6.15 Yes 60 0.16 No 0 0 No -24 0.88 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 56705714 - NM_001112736 FAM208A 1 0.22 0.28 18 0.42 0 14 4 No 6 0.29 No 0 0 No -25 0.71 Yes 45 80.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 56713269 - NM_001112736 FAM208A 1 0.35 0.51 31 7.59 80.51 29 5.81 Yes -1 0.92 Yes 0 0 No -28 0.64 No 42 71.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 5727579 + NM_001321783 FAM208B 1 9.26 1.36 49 10.12 90.4 29 6.43 Yes 40 0.37 No 0 0 No -28 0.73 Yes 42 83.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 5751492 + NM_001321783 FAM208B 1 172.53 25.14 72 10.95 83.89 33 5.92 Yes 67 0.87 Yes 32 0.73 Yes -32 0.71 Yes 38 84.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 5754356 + NM_001321783 FAM208B 1 21.51 3.18 67 10.38 91.2 34 5.76 Yes 42 1.66 Yes 21 0.43 Yes -30 0.61 No 40 73.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 5762222 + NM_001321783 FAM208B 1 0.23 0.14 9 9.2 90.85 26 5.13 No 3 0.5 No 0 0 No -25 0.77 Yes 45 82.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 5762222 + NM_001321783 FAM208B 1 1.35 0.79 34 9.2 90.85 26 5.13 No 3 0.5 No 0 0 No -25 0.77 Yes 45 82.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 5762528 + NM_001321783 FAM208B 1 0.26 0.18 11 7.67 83.03 25 5.5 No 35 1.28 Yes 0 0 No -24 0.53 No 46 56.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 5762592 + NM_001321783 FAM208B 1 0.31 0.18 11 4.23 90.71 21 4.69 No 70 -2.83 No 0 0 No -20 0.82 Yes 50 66.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 5762222 + NM_001321783 FAM208B 1 15.45 9.01 72 9.2 90.85 26 5.13 No 3 0.5 No 0 0 No -25 0.77 Yes 45 82.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 5762592 + NM_001321783 FAM208B 1 0.39 0.22 13 4.23 90.71 21 4.69 No 70 -2.83 No 0 0 No -20 0.82 Yes 50 66.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 5762807 + NM_001321783 FAM208B 1 0.14 0.15 8 1.65 65.14 24 5.63 Yes 40 0.99 Yes 31 0.61 Yes -27 0.46 No 43 45.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 5765646 + NM_001321783 FAM208B 1 0.06 0.1 7 2.2 0 10 4 No 17 0.68 No 0 0 No -29 0.78 Yes 41 56.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 5768652 + NM_001321783 FAM208B 1 0.09 0.11 7 4.28 81.15 30 7.34 Yes 17 2.05 Yes 0 0 No -29 0.75 Yes 41 85.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 5772530 + NM_001321783 FAM208B 1 0.57 0.51 28 5.2 76.09 38 6.31 Yes 25 0.88 Yes 0 0 No -26 0.37 No 39 63.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 5778089 + NM_001321783 FAM208B 1 0.23 0.13 8 10.28 93.99 23 5.82 Yes 15 1.33 Yes 0 0 No -27 0.73 Yes 43 87.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 5784385 + NM_001321783 FAM208B 1 0.1 0.11 7 -0.84 70.47 40 8.03 Yes 27 2.09 Yes 0 0 No -39 0.75 Yes 31 93.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 5801757 + NM_001321783 FAM208B 1 0.64 0.63 27 0.69 80.76 21 4.8 No 66 -3.86 No 0 0 No -20 0.96 Yes 50 95.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 179013804 + NM_001324311 FAM20B 1 0.39 0.22 12 4.75 75.47 45 6.88 Yes 8 0.72 No 0 0 No -27 0.47 No 33 53.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 179013907 + NM_001324311 FAM20B 1 0.45 0.33 21 6.06 80.57 27 5.07 No 76 0.29 No 0 0 No -27 0.33 No 41 37.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 179017276 + NM_001324311 FAM20B 1 0.23 0.17 12 4.06 89.6 15 5 No 28 0.57 No 0 0 No -26 0.29 No 44 51.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 179019715 + NM_001324311 FAM20B 1 0.29 0.19 12 11.3 82.6 28 5.73 Yes 15 1.08 Yes 0 0 No -27 0.75 Yes 43 84.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179024152 + NM_001324311 FAM20B 1 0.25 0.14 7 8.72 88.75 15 5.03 No 21 0.61 No 0 0 No -23 0.56 No 47 68.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 179033166 + NM_001324311 FAM20B 1 0.25 0.13 8 8.53 86.53 32 5.66 Yes 4 0.7 No 0 0 No -31 0.56 No 39 71.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 13668053 - NM_001098801 FAM210A 1 0.6 0.67 28 3.85 0 44 6.74 Yes 66 -2.34 No 0 0 No -30 0.56 No 40 68.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 13670968 - NM_001098801 FAM210A 1 9.27 8.85 72 8.27 93.31 16 4.98 No 45 1.13 Yes 27 0.83 Yes -27 0.82 Yes 43 79.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 13672222 - NM_001098801 FAM210A 1 0.25 0.21 11 5.46 68.95 29 6.01 Yes 62 1.55 Yes 0 0 No -31 0.75 Yes 39 68.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 112279054 - NM_019099 FAM212B 1 0.14 0.13 8 4.91 80.93 51 7.44 Yes 62 0.59 No 0 0 No -24 0.67 Yes 46 86.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 112279101 - NM_019099 FAM212B 1 1.36 0.86 33 2.56 85.23 28 5.65 Yes 15 0.54 No 0 0 No -27 0.9 Yes 43 95.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 112280197 - NM_019099 FAM212B 1 0.53 0.22 15 6.8 81.48 25 7.06 Yes 12 0.91 Yes 0 0 No -24 0.91 Yes 46 90.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2519968 + NM_001195736 FAM213B 1 16.94 1.76 55 -1.77 0 14 4.47 No 51 -2.65 No 25 0.22 Yes -30 0.51 No 45 42.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 2520392 + NM_001195736 FAM213B 1 2.59 0.17 11 5.33 84.47 27 4.94 No 41 1.52 Yes 26 0.89 Yes -26 0.65 No 44 84.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 2520392 + NM_001195736 FAM213B 1 106.25 7.47 72 5.33 84.47 27 4.94 No 41 1.52 Yes 26 0.89 Yes -26 0.65 No 44 84.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 2520395 + NM_001195736 FAM213B 1 2.22 0.19 10 -0.6 70.99 30 5.19 No 44 1.53 Yes 26 0.89 Yes -29 0.62 No 41 81.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 52898279 - NM_001286495 FAM214A 1 0.11 0.1 7 9.42 80.94 29 6.77 Yes 16 0.23 No 0 0 No -28 0.88 Yes 42 91.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35105834 - NR_134455 FAM214B 1 1.85 0.13 9 3.36 74.04 17 5.27 No 25 1.47 Yes 0 0 No -21 0.25 No 59 33.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 110917850 + NM_013300 FAM216A 1 0.2 0.15 11 4.33 84.41 22 8 Yes 9 0.98 Yes 0 0 No -30 0.56 No 43 71.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 110922886 + NM_013300 FAM216A 1 0.35 0.24 12 0.82 0 45 6.99 Yes 32 1.3 Yes 0 0 No -25 0.91 Yes 45 86.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110927832 + NM_013300 FAM216A 1 0.19 0.13 8 4.99 0 12 4.24 No 17 0.76 No 0 0 No -30 0.53 No 40 70.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 58517485 + NM_022106 FAM217B 1 0.57 0.42 21 0.97 0 36 5.96 Yes 23 0.68 No 0 0 No -26 0.76 Yes 35 65.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 58518978 + NM_022106 FAM217B 1 2.66 1.44 52 -3.02 0 11 4.12 No 8 -1.5 No 26 0.4 Yes -39 0.76 Yes 31 79.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 58519450 + NM_022106 FAM217B 1 5.7 3.07 67 11.98 83.31 23 7 Yes 10 1.44 Yes 22 0.87 Yes -22 0.64 No 39 52.55 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 34401118 - NM_001184940 FAM219A 1 37.73 3.76 66 5.5 82.22 27 8.25 Yes 14 2.36 Yes 23 0.96 Yes -26 0.92 Yes 44 89.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 75192479 - NR_135852 FAM219B 1 19.95 1.24 44 9.78 91.42 26 4.88 No 7 0.88 Yes 25 0.84 Yes -25 0.55 No 45 69.1 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 75195128 - NR_135852 FAM219B 1 444.86 39.68 72 7.76 78.38 27 5.57 Yes 70 1.16 Yes 26 0.62 Yes -26 0.66 No 44 77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 75195128 - NR_135852 FAM219B 1 8.72 0.83 40 7.76 78.38 27 5.57 Yes 70 1.16 Yes 26 0.62 Yes -26 0.66 No 44 77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 75197381 - NR_135852 FAM219B 1 1.07 0.46 26 7.55 83.89 14 5.17 No 39 2.08 Yes 23 0.73 Yes -51 0.52 No 19 53.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 75197401 - NR_135852 FAM219B 1 2 0.89 39 8.48 80.74 32 6.61 Yes 19 2.1 Yes 31 0.87 Yes -31 0.86 Yes 39 83.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 75198707 - NR_135852 FAM219B 1 649.7 33.85 72 7.73 89.55 23 6.32 Yes 10 1.8 Yes 22 0.97 Yes -22 0.88 Yes 48 88.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 6387320 - NM_001037163 FAM220A 1 1.23 0.35 19 3 79.28 36 5.88 Yes 54 -3.9 No 0 0 No -24 0.71 Yes 46 67.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 27086895 - NM_001288636 FAM222B 1 451.26 42.13 72 13.04 88.38 49 7.2 Yes 36 2.04 Yes 34 0.1 Yes -48 0.81 Yes 22 89.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 27089175 - NM_001288636 FAM222B 1 1.54 0.18 11 6.07 75.79 31 7.57 Yes 18 1.08 Yes 30 0.79 Yes -25 0.76 Yes 40 69.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 49869503 - NM_152647 FAM227B 1 3.57 0.35 18 9.35 98.88 22 5.2 No 64 -2.93 No 21 0.56 Yes -24 0.63 No 46 71.79 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 49869503 - NM_152647 FAM227B 1 5.42 0.42 25 9.35 98.88 22 5.2 No 64 -2.93 No 21 0.56 Yes -24 0.63 No 46 71.79 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 49881943 - NM_152647 FAM227B 1 1.67 0.17 10 9.3 86.24 28 4.69 No 15 0.7 No 0 0 No -21 0.86 Yes 49 78.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 49898416 - NM_152647 FAM227B 1 25.75 2.36 60 10.09 90.46 19 6.16 Yes 6 1.48 Yes 18 0.38 Yes -24 0.71 Yes 46 60.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 49912388 - NM_152647 FAM227B 1 5.06 0.46 23 5.08 81.26 31 4.99 No 69 -3.01 No 30 0.77 Yes -30 0.35 No 36 30.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 24365361 + NM_001145710 FAM228B 1 5.11 0.53 28 5.38 74.12 31 6 Yes 18 1.15 Yes 0 0 No -30 0.62 No 40 85.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 24365493 + NM_001145710 FAM228B 1 2.64 0.28 16 3.24 82.08 49 7.72 Yes 36 1.01 Yes 0 0 No -48 0.33 No 22 80.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 24367346 + NM_001145710 FAM228B 1 3.93 0.35 19 7.66 83.53 20 5.91 Yes 7 1.56 Yes 0 0 No -19 0.57 No 51 60.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 296958 + NM_001284497 FAM234A 1 0.26 0.11 7 4.32 93.46 19 5.74 Yes 11 1.21 Yes 0 0 No -23 0.94 Yes 47 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 298242 + NM_001284497 FAM234A 1 6.02 2.35 62 6.97 80.54 41 6.53 Yes 1 1.01 Yes 40 0.21 Yes -40 0.62 No 32 55.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 298346 + NM_001284497 FAM234A 1 1.01 0.4 23 9.53 82.95 28 5.66 Yes 15 0.89 Yes 0 0 No -27 0.82 Yes 43 88.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 309994 + NM_001284497 FAM234A 1 8.41 9.19 72 8.7 82.78 32 6 Yes 39 -0.12 No 0 0 No -29 0.77 Yes 41 93.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 310411 + NM_001284497 FAM234A 1 0.17 0.14 7 2.89 76.35 58 7.63 Yes -4 0.65 No 0 0 No -29 0.4 No 41 41.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 312426 + NM_001284497 FAM234A 1 0.27 0.21 14 -3.72 0 33 7.1 Yes 20 1.39 Yes 0 0 No -32 0.89 Yes 38 90.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 313996 + NM_001284497 FAM234A 1 0.1 0.1 7 6.19 78.01 17 5.48 No 51 -3.56 No 0 0 No -23 0.43 No 47 69.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 314615 + NM_001284497 FAM234A 1 0.21 0.14 10 -11.48 72.1 39 6.6 Yes 30 0.04 No 0 0 No -23 0.77 Yes 47 63.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 124618202 - NR_037915 FAM24B-CUZD1 1 6.88 0.4 24 9.85 85.09 26 6.85 Yes 13 1.57 Yes 0 0 No -25 0.92 Yes 45 91.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 67793278 - NR_027422 FAM27B 1 3.23 0.29 17 7.63 94.14 23 5.2 No 66 0.86 Yes 0 0 No -22 0.69 Yes 48 54.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 16297263 + NM_014077 FAM32A 1 0.24 0.4 23 5.25 78.33 20 7.14 Yes 7 0.69 No 19 0.82 Yes -19 0.71 Yes 51 87.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 16300198 + NM_014077 FAM32A 1 0.17 0.28 16 6.46 90.92 25 4.9 No 49 1.03 Yes 24 0.85 Yes -24 0.95 Yes 46 96.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 16300510 + NM_014077 FAM32A 1 0.12 0.19 11 10.11 98.73 36 8.22 Yes 54 0.76 No 0 0 No -36 0.8 Yes 34 90.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88860329 + NM_001330112 FAM35A 1 1.58 0.89 41 7.73 91.36 22 6.63 Yes 52 1.47 Yes 0 0 No -21 0.97 Yes 49 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 88863404 + NM_001330112 FAM35A 1 3.15 1.9 53 9.55 85.86 24 4.84 No 54 1.42 Yes 0 0 No -23 0.62 No 46 69.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88864438 + NM_001330112 FAM35A 1 2.25 1.46 47 1.54 83.92 29 5.57 Yes 16 0.6 No 0 0 No -28 0.81 Yes 42 91.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88881544 + NM_001330112 FAM35A 1 0.56 0.35 19 -2.03 83.84 52 6.67 Yes 66 0.57 No 0 0 No -39 0.6 No 31 62.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 88881548 + NM_001330112 FAM35A 1 4.83 3.1 65 0.15 0 56 6.93 Yes 70 0.57 No 0 0 No -43 0.59 No 18 65.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 88884527 + NM_001330112 FAM35A 1 0.52 0.33 18 3.36 0 34 6.4 Yes 75 0.34 No 0 0 No -33 0.56 No 37 63.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 88887531 + NM_001330112 FAM35A 1 0.53 0.26 14 3.66 77.32 30 5.92 Yes 35 0.47 No 0 0 No -30 0.82 Yes 40 91.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88890380 + NM_001330112 FAM35A 1 0.33 0.19 13 7.66 91.95 17 5.36 No 4 0.95 Yes 0 0 No -28 0.78 Yes 42 84.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 88897361 + NM_001330112 FAM35A 1 0.25 0.17 9 -7.64 64.35 19 5.61 Yes 6 0.25 No 0 0 No -18 0.68 Yes 52 45.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 88897367 + NM_001330112 FAM35A 1 0.25 0.17 9 -2.51 0 14 3.87 No 65 -5.65 No 0 0 No -24 0.8 Yes 46 93.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88907649 + NM_001330112 FAM35A 1 0.51 0.31 18 3.01 0 25 6.4 Yes 12 0.48 No 0 0 No -27 0.57 No 36 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 88910763 + NM_001330112 FAM35A 1 0.82 0.43 21 5.97 85.86 16 5.2 No 3 1.1 Yes 0 0 No -15 0.41 No 55 66.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88910768 + NM_001330112 FAM35A 1 0.23 0.15 9 1.28 0 21 5.66 Yes 8 1.06 Yes 0 0 No -20 0.7 Yes 50 85.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 88911411 + NM_001330112 FAM35A 1 0.71 0.42 23 3.8 78.33 30 6.36 Yes -4 0.32 No 0 0 No -29 0.67 Yes 41 64.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 88916450 + NM_001330112 FAM35A 1 3.46 4.74 70 3.9 79.7 21 6.73 Yes 8 0.15 No 0 0 No -20 0.78 Yes 50 84.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88916506 + NM_001330112 FAM35A 1 0.26 0.38 22 7.11 82.74 31 7.21 Yes 18 0.63 No 0 0 No -30 0.74 Yes 40 69.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88923735 + NM_001330112 FAM35A 1 0.44 0.61 28 4.3 84.41 47 7.44 Yes 34 1.61 Yes 0 0 No -53 0.45 No 17 51.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88930598 + NM_001330112 FAM35A 1 0.08 0.11 8 -0.72 82.33 26 4.46 No 5 0.88 Yes 0 0 No -25 0.5 No 45 59.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88930602 + NM_001330112 FAM35A 1 0.1 0.15 9 -4.98 0 9 3.87 No 9 0.87 Yes 0 0 No -29 0.51 No 41 63.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88932815 + NM_001330112 FAM35A 1 1.04 0.39 21 2.3 84.41 33 5.66 Yes 20 0.89 Yes 0 0 No -32 0.5 No 38 68.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88932819 + NM_001330112 FAM35A 1 0.95 0.33 18 3.01 0 37 6 Yes 24 0.87 Yes 0 0 No -36 0.54 No 34 65.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88939882 + NM_001330112 FAM35A 1 0.83 0.68 27 6.77 88.71 24 5.29 No 62 0.34 No 0 0 No -23 0.9 Yes 47 80.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88939882 + NM_001330112 FAM35A 1 2.98 2.31 59 6.77 88.71 24 5.29 No 62 0.34 No 0 0 No -23 0.9 Yes 47 80.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88939987 + NM_001330112 FAM35A 1 0.16 0.13 8 0.31 58.05 68 8.43 Yes 55 0.77 Yes 0 0 No -31 0.39 No 28 23.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88948778 + NM_001330112 FAM35A 1 2.06 2 58 4.64 84.41 28 6.32 Yes 15 1.47 Yes 0 0 No -27 0.65 No 37 64.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153736214 - NM_001282311 FAM3A 1 17.03 5.68 70 4.6 81.52 25 5.57 Yes -3 0.31 No 24 0.86 Yes -24 0.85 Yes 46 81.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153736217 - NM_001282311 FAM3A 1 3 1 49 1.51 76.55 22 5.29 No 65 -0.73 No 24 0.86 Yes -21 0.83 Yes 49 79.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153736984 - NM_001282311 FAM3A 1 2.44 1.49 49 9.01 82.78 14 9.04 Yes 1 2.21 Yes 41 0.38 Yes -32 0.55 No 38 69.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 153737143 - NM_001282311 FAM3A 1 0.83 0.51 28 9.83 88.05 26 5.66 Yes 67 2 Yes 25 0.89 Yes -25 0.93 Yes 45 85.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153740756 - NM_001282311 FAM3A 1 2.36 0.26 15 1.79 0 36 5.1 No 18 0.66 No 30 0.82 Yes -35 0.55 No 40 64.85 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 121000434 - NM_014888 FAM3C 1 0.09 0.29 15 5.52 83.82 34 5.92 Yes 41 1.04 Yes 0 0 No -26 0.72 Yes 44 61.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 121004242 - NM_014888 FAM3C 1 0.08 0.15 8 -9.5 0 35 6.54 Yes 72 1.77 Yes 0 0 No -34 0.38 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 121004873 - NM_014888 FAM3C 1 0.05 0.11 8 7.24 86.45 41 4.91 No 25 0.73 No 0 0 No -22 0.88 Yes 48 84.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 121010397 - NM_014888 FAM3C 1 0.07 0.15 8 5.8 0 20 4.58 No 14 0.31 No 0 0 No -19 0.72 Yes 43 40.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 121010409 - NM_014888 FAM3C 1 0.12 0.28 16 5.44 77.45 30 4.27 No 2 0.17 No 0 0 No -23 0.54 No 41 51.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 121012190 - NM_014888 FAM3C 1 0.23 0.47 21 -1.36 0 29 5.14 No 16 1.06 Yes 0 0 No -28 0.93 Yes 42 96.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 121018537 - NM_014888 FAM3C 1 0.07 0.15 9 6.02 80.37 20 4.89 No 27 0.02 No 0 0 No -23 0.81 Yes 48 78.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 121020319 - NM_014888 FAM3C 1 0.66 0.67 35 8.59 89.25 26 4.79 No 0 0.81 Yes 25 0.31 Yes -29 0.55 No 41 44.8 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 121032982 - NM_014888 FAM3C 1 5.33 1.31 47 5.28 78.76 42 8.4 Yes 29 0.66 No 0 0 No -37 0.77 Yes 33 71.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 121035092 - NM_014888 FAM3C 1 0.52 0.15 10 8.01 83.82 25 4.55 No 36 0.91 Yes 0 0 No -24 0.73 Yes 46 70.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120879897 + NM_001303111 FAM45A 1 0.36 0.15 8 5.13 80.5 34 6.32 Yes 58 0.98 Yes 0 0 No -33 0.81 Yes 37 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120892527 + NM_001303111 FAM45A 1 0.41 0.14 8 10.77 94.14 26 6.24 Yes 55 -1.32 No 0 0 No -25 0.82 Yes 45 78.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 120896568 + NM_001303111 FAM45A 1 0.68 0.28 16 9.05 89.81 25 6.32 Yes 38 1.24 Yes 24 0.89 Yes -24 0.48 No 46 51.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 130861607 - NR_046361 FAM49B 1 0.13 0.39 18 -7.28 0 12 3.22 No 34 1.2 Yes 0 0 No -46 0.6 No 24 58.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 130864521 - NR_046361 FAM49B 1 0.05 0.11 7 1.57 0 33 5.74 Yes 20 1.18 Yes 0 0 No -32 0.87 Yes 38 96.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 130867988 - NR_046361 FAM49B 1 0.04 0.15 9 -1.97 0 9 3.87 No 20 0.95 Yes 0 0 No -33 0.83 Yes 37 85.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 130867991 - NR_046361 FAM49B 1 0.06 0.21 12 1.81 81.31 30 6.98 Yes 17 0.95 Yes 0 0 No -30 0.83 Yes 40 84.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 130916832 - NR_046361 FAM49B 1 80.22 25.92 72 8.12 93.96 21 5.2 No 37 1.03 Yes 20 0.71 Yes -20 0.89 Yes 50 86.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 130924762 - NR_046361 FAM49B 1 6.62 2.13 59 7.96 83.76 32 6.48 Yes 19 0.12 No 31 0.58 Yes -26 0.41 No 44 70.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 130961314 - NR_046361 FAM49B 1 0.57 0.18 10 4.08 0 32 6.01 Yes 35 0.12 No 31 0.45 Yes -31 0.57 No 39 68.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 130961318 - NR_046361 FAM49B 1 0.43 0.13 8 2.38 83.78 28 5.69 Yes 73 0.7 No 31 0.45 Yes -27 0.55 No 43 67.96 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153677526 + NM_004699 FAM50A 1 0.2 0.31 17 -0.14 0 16 4.47 No 3 0.17 No 23 0.63 Yes -15 0.71 Yes 55 50.65 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 153678263 + NM_004699 FAM50A 1 0.46 0.72 35 1.01 73.84 30 5.83 Yes 0 -0.83 No 0 0 No -29 0.81 Yes 41 52.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153678528 + NM_004699 FAM50A 1 0.23 0.42 21 -13.78 0 17 3.8 No 71 -5.8 No 33 0.66 Yes -59 0.39 No 18 44.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 126383655 - NM_014661 FAM53B 1 1.06 0.54 27 11.46 94.53 67 8.19 Yes 54 0.64 No 0 0 No -29 0.87 Yes 41 93.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 137676828 + NM_016605 FAM53C 1 0.62 0.53 30 7.55 79.15 48 5.59 Yes 62 -3.64 No 30 0.75 Yes -24 0.72 Yes 46 85.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137680516 + NM_016605 FAM53C 1 1.5 1.82 55 2.31 73.43 33 7.03 Yes 20 0.76 No 0 0 No -32 0.77 Yes 38 69.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 137681084 + NM_016605 FAM53C 1 0.43 0.53 26 5.05 79.53 26 5.41 No 37 1.42 Yes 25 0.93 Yes -25 0.88 Yes 45 85.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137681146 + NM_016605 FAM53C 1 0.24 0.26 16 9.12 81.28 28 5.32 No 75 0.81 Yes 0 0 No -27 0.64 No 48 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 636856 + NM_024792 FAM57A 1 0.73 0.22 11 11.95 91.89 48 7.36 Yes 64 -0.66 No 0 0 No -30 0.42 No 46 43.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 152853853 - NM_152274 FAM58A 1 68.44 22.79 72 8.64 82.4 27 5.25 No -1 0.5 No 26 0.64 Yes -26 0.81 Yes 44 61.16 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 152853853 - NM_152274 FAM58A 1 0.55 0.24 12 8.64 82.4 27 5.25 No -1 0.5 No 26 0.64 Yes -26 0.81 Yes 44 61.16 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 152858162 - NM_152274 FAM58A 1 3.99 2.88 59 9.88 90.82 21 5.66 Yes 36 1.46 Yes 29 0.53 Yes -20 0.62 No 50 74.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 152863871 - NM_152274 FAM58A 1 1.47 0.33 18 4.4 84.41 24 3.74 No 54 -1.67 No 0 0 No -24 0.75 Yes 46 74.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 31435802 - NM_001135811 FAM60A 1 0.13 0.49 23 1.98 0 35 8.76 Yes 22 1.33 Yes 0 0 No -34 0.87 Yes 36 86.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 31446879 - NM_001135811 FAM60A 1 0.04 0.14 8 1.38 75.05 51 7.08 Yes 75 -3.82 No 22 0.54 Yes -27 0.88 Yes 43 93.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 31449979 - NM_001135811 FAM60A 1 0.05 0.11 7 7.93 83.64 40 7.43 Yes 27 1.56 Yes 39 0.59 Yes -27 0.78 Yes 43 77.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 31453826 - NM_001135811 FAM60A 1 1.86 1.01 41 2.02 75.54 52 6.73 Yes 31 1.04 Yes 0 0 No -51 0.64 No 28 57.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 31455978 - NM_001135811 FAM60A 1 0.4 0.26 12 12.43 99.37 21 8.22 Yes 8 0.57 No 0 0 No -25 0.51 No 39 50 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 150970708 - NM_001163258 FAM63A 1 0.94 0.18 11 2.58 0 18 4.57 No 52 0.86 Yes 0 0 No -17 0.85 Yes 53 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150970720 - NM_001163258 FAM63A 1 1.01 0.21 9 4.66 77.17 27 5.71 Yes 40 0.87 Yes 0 0 No -22 0.79 Yes 48 75.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59098974 + NM_001040450 FAM63B 1 1.18 0.38 19 8.84 91.07 23 6.13 Yes 10 1.81 Yes 0 0 No -22 0.94 Yes 48 94.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59116895 + NM_001040450 FAM63B 1 1.01 0.15 8 3.06 0 37 5.24 No 65 0.88 Yes 0 0 No -36 0.87 Yes 34 91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59146683 + NM_001040450 FAM63B 1 32.55 6 71 3.72 90.5 31 6.4 Yes 18 0.67 No 27 0.79 Yes -30 0.73 Yes 40 68.37 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 6349414 + NM_001195228 FAM64A 1 0.97 0.21 14 3.99 87.81 18 4.9 No 57 -5.15 No 27 0.83 Yes -17 0.54 No 53 52.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67572562 + NM_001193524 FAM65A 1 0.82 0.11 7 1.46 0 41 6.71 Yes 68 -3.26 No 28 0.41 Yes -40 0.46 No 42 51.24 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67573752 + NM_001193524 FAM65A 1 1.47 0.49 26 -1.99 0 22 6.32 Yes 9 2.25 Yes 29 0.75 Yes -21 0.71 Yes 49 88.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67574454 + NM_001193524 FAM65A 1 0.82 0.28 16 0.08 68.72 9 4.89 No 46 -4.19 No 21 0.07 Yes -17 0.34 No 62 26.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67575419 + NM_001193524 FAM65A 1 1.07 0.42 24 7.24 82.05 33 5.57 Yes 72 -1.59 No 0 0 No -30 0.47 No 40 62.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67577253 + NM_001193524 FAM65A 1 6.69 1.65 55 2.83 71.21 23 6.24 Yes 10 1.77 Yes 19 0.69 Yes -22 0.91 Yes 48 80.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67578213 + NM_001193524 FAM65A 1 0.32 0.1 7 0.39 0 15 4.58 No 40 1.15 Yes 0 0 No -52 0.86 Yes 18 90.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67578267 + NM_001193524 FAM65A 1 0.41 0.11 8 4.62 75.57 22 4.9 No 9 1.45 Yes 31 0.42 Yes -21 0.96 Yes 49 96.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 24839825 - NM_001346032 FAM65B 1 2.28 0.44 24 -7.34 61.25 68 9.38 Yes 55 1.44 Yes 0 0 No -31 0.8 Yes 13 16.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 24839828 - NM_001346032 FAM65B 1 36.95 7.9 72 3.46 68.25 65 9.22 Yes 52 1.44 Yes 0 0 No -28 0.86 Yes 42 31.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 24841004 - NM_001346032 FAM65B 1 79.44 18.13 72 8.83 81.18 36 6.4 Yes 40 -1.02 No 38 0.17 Yes -38 0.77 Yes 32 87.32 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 206146974 + NM_001317901 FAM72A 1 0.85 0.4 17 3.43 71.98 42 6.93 Yes 21 1.28 Yes 0 0 No -33 0.46 No 37 62.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 120842442 + NM_001320149 FAM72B 1 0.57 0.24 15 11.06 86.3 29 5.82 Yes 74 2.32 Yes 0 0 No -28 0.35 No 42 53.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 120847516 + NM_001320149 FAM72B 1 0.39 0.17 8 3.43 71.98 42 6.93 Yes 21 1.28 Yes 0 0 No -33 0.46 No 37 62.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 143906071 - NR_144320 FAM72D 1 0.19 0.14 7 4 74.69 34 6 Yes 74 1.38 Yes 0 0 No -33 0.73 Yes 37 85.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 143906098 - NR_144320 FAM72D 1 0.35 0.15 7 5.63 76.64 15 3.99 No 47 1.37 Yes 0 0 No -22 0.74 Yes 48 61.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 28056742 + NM_001143915 FAM76A 1 3.01 0.69 37 5.5 90.92 28 5.29 No 70 0.25 No 27 0.76 Yes -27 0.61 No 43 38.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 28075578 + NM_001143915 FAM76A 1 407.3 26.83 72 3.61 71.01 32 7.32 Yes 19 1.86 Yes 31 0.87 Yes -31 0.73 Yes 39 85.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 28082855 + NM_001143915 FAM76A 1 0.45 0.15 7 2.84 0 37 7.06 Yes 24 1.46 Yes 0 0 No -36 0.94 Yes 34 95.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28082986 + NM_001143915 FAM76A 1 0.44 0.14 8 3.36 81.86 20 7.14 Yes 7 1.21 Yes 0 0 No -19 0.69 Yes 51 79.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28086307 + NM_001143915 FAM76A 1 0.72 0.18 10 5.07 0 34 6.32 Yes 32 1.15 Yes 0 0 No -33 0.72 Yes 37 86.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28086468 + NM_001143915 FAM76A 1 4.4 1.17 47 7.27 86.44 25 7.48 Yes 12 1.52 Yes 24 0.83 Yes -24 0.87 Yes 46 91.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 95512119 - NM_144664 FAM76B 1 13.15 9.58 72 4.25 83.68 30 9.94 Yes 38 1.55 Yes 26 0.93 Yes -29 0.78 Yes 41 73.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 95512300 - NM_144664 FAM76B 1 8.19 6.01 72 7.92 96.82 23 5.49 No 73 0.66 No 22 0.93 Yes -22 0.85 Yes 48 91.05 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 95513113 - NM_144664 FAM76B 1 0.95 1.01 42 3.72 67.18 23 4.01 No 2 0.1 No 30 0.41 Yes -22 0.77 Yes 48 59.96 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 95516382 - NM_144664 FAM76B 1 0.24 0.19 13 -0.31 68.34 44 5.96 Yes 52 0.77 No 0 0 No -30 0.57 No 40 57.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 95519463 - NM_144664 FAM76B 1 1.2 0.94 40 3.82 68.69 14 7.99 Yes 1 0.64 No 20 0.75 Yes -29 0.49 No 41 72.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 134138983 - NM_033387 FAM78A 1 1.68 1.01 44 3.12 0 22 7.71 Yes 29 1.78 Yes 0 0 No -28 0.48 No 29 46.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 134138987 - NM_033387 FAM78A 1 0.8 0.49 24 6.93 85.05 18 7.5 Yes 25 1.8 Yes 37 0.71 Yes -24 0.52 No 33 58.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 59768186 + NM_152450 FAM81A 1 0.33 0.11 8 -1.37 73.23 34 5.16 No 72 0.38 No 0 0 No -30 0.46 No 40 58.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59784963 + NM_152450 FAM81A 1 0.36 0.11 7 1.53 73.49 40 6.8 Yes 27 0.62 No 0 0 No -23 0.75 Yes 47 46.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 37567041 + NM_030919 FAM83D 1 0.48 0.13 7 8.18 78.34 39 6.68 Yes 71 1.45 Yes 0 0 No -28 0.65 No 42 76.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 37575361 + NM_030919 FAM83D 1 1.33 0.78 33 9.29 85.81 29 5.83 Yes 23 1.02 Yes 0 0 No -28 0.71 Yes 42 65.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 37577499 + NM_030919 FAM83D 1 0.51 0.29 17 9.5 89.61 21 6.14 Yes 8 1.32 Yes 0 0 No -20 0.82 Yes 50 79.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37580323 + NM_030919 FAM83D 1 0.65 0.47 23 9.03 88.55 28 4.51 No -4 0.51 No 0 0 No -27 0.73 Yes 43 81.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 18880365 - NM_001039999 FAM83G 1 3.65 1.24 46 8.52 80.29 40 7.14 Yes 27 0.81 Yes 39 0.79 Yes -37 0.5 No 31 68.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 18882106 - NM_001039999 FAM83G 1 0.6 0.15 8 9.79 82.9 22 8.19 Yes 72 1.84 Yes 0 0 No -21 0.82 Yes 49 76.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71507560 + NM_152563 FAM86C1 1 1.54 0.18 13 4.36 83.63 17 4.69 No 47 -3.92 No 0 0 No -19 0.84 Yes 51 76.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 71507756 + NM_152563 FAM86C1 1 3.2 0.33 19 0.68 66.48 29 6.22 Yes 49 0.72 No 0 0 No -23 0.54 No 47 57.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71510153 + NM_152563 FAM86C1 1 0.73 0.1 7 6.64 86.24 19 7.07 Yes 6 1.18 Yes 0 0 No -18 0.71 Yes 52 88.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71510667 + NM_152563 FAM86C1 1 7.57 1.06 43 7.11 91 23 5.04 No 10 0.68 No 0 0 No -22 0.81 Yes 48 73.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 75472294 - NR_024241 FAM86DP 1 9.03 1.71 48 7.08 84.94 26 5.29 No 13 1.23 Yes 25 0.94 Yes -25 0.86 Yes 45 84.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 75475256 - NR_024241 FAM86DP 1 1.34 0.25 14 4.36 83.63 17 4.69 No 74 0.85 Yes 19 0.77 Yes -19 0.85 Yes 51 84.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 124785133 + NM_001317917 FAM91A1 1 1.51 1.39 51 3.78 71.75 15 5.72 Yes -1 0.47 No 0 0 No -26 0.73 Yes 44 71.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 124785188 + NM_001317917 FAM91A1 1 0.14 0.14 10 1.97 73.99 36 5.39 No 23 0.49 No 0 0 No -32 0.75 Yes 35 85.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 124785191 + NM_001317917 FAM91A1 1 0.15 0.17 10 2.86 71.74 39 5.61 Yes 26 0.5 No 0 0 No -35 0.71 Yes 32 85.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 124786321 + NM_001317917 FAM91A1 1 1.51 1.44 45 -5.74 76.81 27 5.86 Yes 3 0.08 No 0 0 No -27 0.64 No 43 63.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 124793738 + NM_001317917 FAM91A1 1 0.17 0.29 15 3.97 84.41 27 9.55 Yes 52 0.74 No 0 0 No -26 0.41 No 44 50.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 124795118 + NM_001317917 FAM91A1 1 0.08 0.11 8 8.5 73.43 39 5.94 Yes 26 1.14 Yes 0 0 No -33 0.8 Yes 37 78.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 124798102 + NM_001317917 FAM91A1 1 0.08 0.15 11 6.44 92 27 5.19 No 14 0.14 No 0 0 No -26 0.83 Yes 44 68.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 124800440 + NM_001317917 FAM91A1 1 1.74 3 68 6.91 78.07 87 8.56 Yes 2 1.32 Yes 0 0 No -26 0.89 Yes 44 88.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 124820514 + NM_001317917 FAM91A1 1 0.1 0.13 8 -14.56 64.15 31 6.08 Yes 54 1.03 Yes 0 0 No -30 0.88 Yes 40 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 124820851 + NM_001317917 FAM91A1 1 0.07 0.14 9 11.79 88.37 48 6.7 Yes 18 0.75 No 0 0 No -30 0.49 No 41 38.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 124821144 + NM_001317917 FAM91A1 1 0.05 0.11 7 -0.99 0 15 4.58 No 68 -3.5 No 22 0.46 Yes -33 0.38 No 36 52.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 124824295 + NM_001317917 FAM91A1 1 0.4 0.63 27 5.12 85.02 19 5.48 No 6 1.12 Yes 23 0.65 Yes -18 0.66 Yes 52 79.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 124827433 + NM_001317917 FAM91A1 1 0.71 1.22 46 11.18 99.37 21 4.42 No 46 1.21 Yes 0 0 No -28 0.79 Yes 42 74.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64365244 - NR_110310 FAM96A 1 0.02 0.14 7 -3.9 0 25 5.2 No 12 1.13 Yes 23 0.96 Yes -24 0.93 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 64366107 - NR_110310 FAM96A 1 0.26 1.14 48 2.93 68.03 73 7.85 Yes 54 0.89 Yes 0 0 No -31 0.56 No 31 46.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 64380676 - NR_110310 FAM96A 1 0.19 0.64 34 11.9 91.9 26 5.62 Yes 49 0.55 No 0 0 No -25 0.33 No 40 42.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 66966454 - NR_046109 FAM96B 1 0.02 0.1 7 5.99 72.93 44 7.83 Yes 31 1.11 Yes 43 0.77 Yes -43 0.94 Yes 27 96.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 33811740 - NM_001304538 FAM98A 1 0.03 0.1 7 -6.92 0 9 3.87 No 19 1.83 Yes 0 0 No -31 0.76 Yes 39 89.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 33820400 - NM_001304538 FAM98A 1 0.1 0.22 13 9.85 81.33 29 5.76 Yes 61 0.1 No 0 0 No -29 0.41 No 42 40.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 38750842 + NM_173611 FAM98B 1 0.13 0.17 8 8.87 90.82 34 4.39 No 6 0.68 No 0 0 No -24 0.76 Yes 46 88.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 38757473 + NM_173611 FAM98B 1 0.14 0.25 16 -3 0 33 5.47 No 20 0.68 No 0 0 No -36 0.8 Yes 34 89.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 38775227 + NM_173611 FAM98B 1 0.1 0.17 12 11.52 88.03 28 4.19 No 11 0.23 No 0 0 No -23 0.75 Yes 47 74.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 38895352 + NM_174905 FAM98C 1 0.66 0.25 11 3.6 85.02 17 5.93 Yes 4 1.39 Yes 33 0.81 Yes -33 0.9 Yes 37 90.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 38895562 + NM_174905 FAM98C 1 2.11 0.46 28 6.73 88.41 24 4.79 No 32 0.9 Yes 0 0 No -26 0.67 Yes 47 77.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38896014 + NM_174905 FAM98C 1 3.02 0.89 39 9.09 91.79 20 5 No 36 1.93 Yes 0 0 No -26 0.58 No 52 63.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 38896162 + NM_174905 FAM98C 1 2.12 0.6 31 -1.82 0 27 5.19 No 14 1.7 Yes 0 0 No -26 0.87 Yes 44 90.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38899308 + NM_174905 FAM98C 1 0.72 0.15 9 9.07 91.41 32 5.46 No 70 0.85 Yes 0 0 No -23 0.74 Yes 47 63.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 31198573 + NM_014967 FAN1 1 1.67 0.61 32 4.88 62.43 34 5.5 No 21 0.51 No 33 0.73 Yes -33 0.58 No 37 60.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 31201725 + NM_014967 FAN1 1 0.65 0.38 23 5.48 82.96 19 5.48 No 46 0.84 Yes 0 0 No -28 0.85 Yes 42 91.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 31210285 + NM_014967 FAN1 1 1.04 0.56 28 8.8 92.72 32 5.31 No 19 0.99 Yes 0 0 No -31 0.56 No 39 53.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 31217298 + NM_014967 FAN1 1 0.82 0.33 19 5.79 78.84 15 5.29 No 44 0.02 No 26 0.63 Yes -26 0.5 No 44 73.83 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 31218810 + NM_014967 FAN1 1 14.68 2.36 57 7.33 97.81 20 5.21 No 32 0.56 No 0 0 No -28 0.67 Yes 42 78.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89805675 - NM_001286167 FANCA 1 2.81 1.39 43 3.71 75.66 32 5.66 Yes 66 0.67 No 31 0.76 Yes -31 0.88 Yes 39 83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89805675 - NM_001286167 FANCA 1 0.38 0.14 9 3.71 75.66 32 5.66 Yes 66 0.67 No 31 0.76 Yes -31 0.88 Yes 39 83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89806064 - NM_001286167 FANCA 1 1.02 0.5 21 8.02 81.32 30 5.57 Yes 42 1.08 Yes 0 0 No -29 0.89 Yes 41 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89806209 - NM_001286167 FANCA 1 1.71 0.88 34 4.54 79.33 28 4.25 No 70 0.23 No 26 0.74 Yes -23 0.58 No 47 74.87 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 89812391 - NM_001286167 FANCA 1 0.2 0.1 7 8.59 89.8 25 5.09 No 51 0.32 No 0 0 No -24 0.46 No 51 73.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 89816308 - NM_001286167 FANCA 1 0.25 0.13 8 -8.32 78.53 24 5.48 No 33 0.23 No 0 0 No -23 0.76 Yes 47 80.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89825110 - NM_001286167 FANCA 1 1.34 0.54 28 3.95 0 27 5.29 No 74 0.38 No 0 0 No -26 0.84 Yes 44 75.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89826162 - NM_001286167 FANCA 1 0.95 0.49 23 2.69 0 43 9.9 Yes 47 -1.87 No 0 0 No -42 0.85 Yes 28 71.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89828835 - NM_001286167 FANCA 1 0.21 0.14 8 6.58 77.76 20 7.99 Yes 7 1.01 Yes 0 0 No -19 0.69 Yes 51 90.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89829202 - NM_001286167 FANCA 1 9.53 4.83 56 1.67 59.39 23 7.14 Yes 76 0.87 Yes 22 0.73 Yes -22 0.79 Yes 48 65.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 89831372 - NM_001286167 FANCA 1 0.7 0.43 24 10.5 88.77 17 3.84 No 73 0.05 No 18 0.21 Yes -25 0.67 Yes 45 74.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89831455 - NM_001286167 FANCA 1 0.16 0.1 7 6.57 86.45 23 3.38 No 22 1.01 Yes 24 0.85 Yes -22 0.9 Yes 48 88.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89833609 - NM_001286167 FANCA 1 0.28 0.15 10 5.66 71.85 15 5.57 Yes 2 1.05 Yes 0 0 No -28 0.63 No 42 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 89836871 - NM_001286167 FANCA 1 4.68 1.53 55 7.6 87.65 19 4.67 No 6 0.72 No 18 0.93 Yes -18 0.96 Yes 52 97 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89844871 - NM_001286167 FANCA 1 4.54 2.36 62 12.22 88.27 26 5.66 Yes 13 1.27 Yes 25 0.93 Yes -25 0.89 Yes 45 91.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 89851568 - NM_001286167 FANCA 1 1.84 0.65 28 10.69 87.37 37 8.71 Yes 24 0.64 No 0 0 No -39 0.42 No 34 54.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89865488 - NM_001286167 FANCA 1 45.52 12.03 72 4.9 78.89 22 4.89 No 63 -2.97 No 22 0.66 Yes -29 0.42 No 44 31.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 89865507 - NM_001286167 FANCA 1 0.46 0.11 8 -13.81 0 11 3.52 No 63 -4.92 No 22 0.66 Yes -10 0.44 No 56 29.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 89875700 - NM_001286167 FANCA 1 1.26 0.68 29 6.6 82.9 17 5.64 Yes 52 -4.68 No 0 0 No -29 0.62 No 51 64.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89877208 - NM_001286167 FANCA 1 2.02 1.67 51 0.54 78.64 39 5.79 Yes 5 0.88 Yes 0 0 No -26 0.5 No 44 48.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 89877466 - NM_001286167 FANCA 1 0.56 0.26 16 6.57 91.75 17 4.39 No 35 -1.68 No 22 0.4 Yes -46 0.45 No 34 44.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 89877466 - NM_001286167 FANCA 1 0.5 0.17 10 6.57 91.75 17 4.39 No 35 -1.68 No 22 0.4 Yes -46 0.45 No 34 44.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 89880735 - NM_001286167 FANCA 1 0.22 0.11 8 4.88 70.43 42 6.52 Yes 29 1.12 Yes 0 0 No -22 0.59 No 48 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 89881018 - NM_001286167 FANCA 1 0.21 0.15 8 -0.8 0 34 5.87 Yes 30 0.11 No 0 0 No -33 0.56 No 37 63.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 14862830 - NM_001324162 FANCB 1 0.71 0.21 12 8.88 85.4 13 4.26 No 34 1.19 Yes 0 0 No -24 0.45 No 49 48.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 14862830 - NM_001324162 FANCB 1 1.79 0.38 19 8.88 85.4 13 4.26 No 34 1.19 Yes 0 0 No -24 0.45 No 49 48.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 14867742 - NM_001324162 FANCB 1 0.45 0.11 8 6.58 79.26 28 5.48 No 15 0.48 No 0 0 No -27 0.75 Yes 43 87.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 14868794 - NM_001324162 FANCB 1 3.65 0.43 21 3.6 88.12 31 5.02 No 64 1.03 Yes 0 0 No -30 0.45 No 40 57.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 14880455 - NM_001324162 FANCB 1 12.53 1.46 54 5.92 77.78 15 5.43 No 2 1.74 Yes 0 0 No -30 0.89 Yes 40 96.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 14883725 - NM_001324162 FANCB 1 0.51 0.11 7 7.11 78.66 44 6.93 Yes 31 1.62 Yes 29 0.84 Yes -43 0.88 Yes 27 96.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 97869796 - NM_001243743 FANCC 1 0.64 0.13 8 3.19 62.45 36 6.48 Yes 37 1.2 Yes 35 0.53 Yes -35 0.62 No 35 63.53 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 97873602 - NM_001243743 FANCC 1 0.57 0.13 8 4.31 76.94 31 5.55 No 28 0.78 Yes 0 0 No -21 0.61 No 40 59.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 97873628 - NM_001243743 FANCC 1 1.64 0.33 17 7.41 0 22 4.41 No 2 0.8 Yes 0 0 No -21 0.73 Yes 49 71.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 97948928 - NM_001243743 FANCC 1 2.96 1.04 47 9.4 87.48 29 7.98 Yes 16 1.19 Yes 0 0 No -28 0.71 Yes 42 68.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 97986257 - NM_001243743 FANCC 1 0.74 0.24 15 0.43 82.06 45 7.2 Yes 32 1.18 Yes 0 0 No -44 0.68 Yes 26 73.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 97997124 - NM_001243743 FANCC 1 0.64 0.19 10 8.09 81.96 34 5.95 Yes 21 0.88 Yes 0 0 No -33 0.82 Yes 37 86.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 10073982 + NM_001319984 FANCD2 1 0.77 0.96 43 7.18 86.91 25 5.94 Yes 3 0.17 No 24 0.83 Yes -24 0.94 Yes 46 96.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 10076077 + NM_001319984 FANCD2 1 0.11 0.11 8 6.67 84.92 37 5.08 No 24 0.1 No 0 0 No -25 0.65 No 45 34.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 10076385 + NM_001319984 FANCD2 1 0.11 0.11 7 -7.02 0 11 3.17 No 33 0.69 No 30 0.67 Yes -45 0.47 No 20 57.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 10082220 + NM_001319984 FANCD2 1 1.11 1.19 46 9.15 81.48 27 6.47 Yes 76 1.36 Yes 26 0.8 Yes -26 0.69 Yes 44 67.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 10084642 + NM_001319984 FANCD2 1 0.13 0.17 9 8.08 90.18 19 9.11 Yes 35 1.23 Yes 0 0 No -26 0.49 No 45 80.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 10132019 + NM_001319984 FANCD2 1 0.31 0.22 14 0.79 56 47 7.28 Yes 67 -0.69 No 0 0 No -46 0.59 No 24 77.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 10085009 + NM_001319984 FANCD2 1 1.46 1.56 51 5.79 76.13 15 4.52 No 67 0.74 No 0 0 No -34 0.58 No 41 59.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 10085086 + NM_001319984 FANCD2 1 0.35 0.42 24 6.07 89.18 27 4.64 No 54 -2.1 No 0 0 No -22 0.75 Yes 44 81.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 10086624 + NM_001319984 FANCD2 1 1.59 1.39 48 5.64 69.9 58 8.72 Yes 19 1.06 Yes 0 0 No -32 0.53 No 25 75.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 10087306 + NM_001319984 FANCD2 1 0.23 0.18 12 2.3 84.41 29 6.2 Yes 16 1.03 Yes 0 0 No -28 0.8 Yes 42 79.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 10097072 + NM_001319984 FANCD2 1 0.23 0.26 13 7.64 85.73 73 7.88 Yes 21 1.27 Yes 0 0 No -33 0.75 Yes 37 73.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 10098001 + NM_001319984 FANCD2 1 0.1 0.14 9 5.71 83.67 16 4.69 No 29 0.53 No 0 0 No -30 0.37 No 40 90.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 10103837 + NM_001319984 FANCD2 1 2.43 2.47 60 0.22 79.87 34 4.84 No 69 -3.1 No 0 0 No -30 0.61 No 40 41.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 10106075 + NM_001319984 FANCD2 1 0.54 0.46 28 7.3 81.75 40 6.58 Yes -1 0.05 No 0 0 No -23 0.5 No 52 62.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 10106509 + NM_001319984 FANCD2 1 0.78 0.68 35 8.26 92.75 28 7.14 Yes 15 0.86 Yes 0 0 No -28 0.41 No 40 47.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 10111692 + NM_001319984 FANCD2 1 0.07 0.11 8 7.9 76.03 35 6.16 Yes 59 -0.53 No 0 0 No -21 0.69 Yes 36 73.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 10114563 + NM_001319984 FANCD2 1 0.21 0.31 18 -0.31 0 12 4.24 No 22 0.49 No 0 0 No -28 0.92 Yes 42 90.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 10114638 + NM_001319984 FANCD2 1 0.69 1.07 42 3.64 82.21 29 5.93 Yes 9 0.72 No 0 0 No -28 0.4 No 42 78.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 10114990 + NM_001319984 FANCD2 1 0.16 0.14 9 5.92 76.68 13 5.76 Yes 0 0.94 Yes 0 0 No -28 0.64 No 42 74.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 10131797 + NM_001319984 FANCD2 1 0.79 0.61 32 7.65 87.34 18 4.99 No 60 1.71 Yes 0 0 No -26 0.91 Yes 44 91.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 10132019 + NM_001319984 FANCD2 1 0.19 0.15 10 0.79 56 47 7.28 Yes 67 -0.69 No 0 0 No -46 0.59 No 24 77.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 35426094 + NM_021922 FANCE 1 0.69 0.15 10 4.55 76.56 27 5.48 No 14 0.03 No 0 0 No -27 0.59 No 43 48.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35426070 + NM_021922 FANCE 1 1.56 0.33 19 -1.06 63.65 39 5.9 Yes 50 -1.63 No 40 0.2 Yes -37 0.86 Yes 33 89.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 35426094 + NM_021922 FANCE 1 8.12 2.03 55 4.55 76.56 27 5.48 No 14 0.03 No 0 0 No -27 0.59 No 43 48.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35428332 + NM_021922 FANCE 1 0.63 0.18 11 2.23 0 26 5.39 No 13 0.04 No 0 0 No -25 0.85 Yes 45 91.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35074237 - NM_004629 FANCG 1 0.28 0.22 13 8.73 85.31 16 5.68 Yes 36 0.48 No 25 0.85 Yes -30 0.7 Yes 43 55.9 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 35074460 - NM_004629 FANCG 1 3.1 2.32 58 6.13 85.42 30 5.51 No 5 1.02 Yes 24 0.9 Yes -29 0.64 No 41 76.15 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 35074460 - NM_004629 FANCG 1 0.12 0.1 7 6.13 85.42 30 5.51 No 5 1.02 Yes 24 0.9 Yes -29 0.64 No 41 76.15 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 35075074 - NM_004629 FANCG 1 0.47 0.38 20 -4.94 0 9 3.87 No 41 0.47 No 0 0 No -26 0.69 Yes 44 86.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35075605 - NM_004629 FANCG 1 2.05 0.89 41 1.78 72.94 28 5.8 Yes 15 0.74 No 0 0 No -27 0.94 Yes 43 95.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35075727 - NM_004629 FANCG 1 8.57 3.15 70 11.09 87.55 33 5.14 No 50 1.11 Yes 0 0 No -27 0.6 No 43 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 35075727 - NM_004629 FANCG 1 0.61 0.22 15 11.09 87.55 33 5.14 No 50 1.11 Yes 0 0 No -27 0.6 No 43 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 35076021 - NM_004629 FANCG 1 0.46 0.24 16 2.02 0 25 5.63 Yes 12 0.24 No 0 0 No -24 0.87 Yes 46 91.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35078075 - NM_004629 FANCG 1 0.19 0.1 7 11.42 89.77 44 4.84 No 36 1.09 Yes 0 0 No -37 0.8 Yes 33 90.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89788425 + NM_001113378 FANCI 1 2.13 1.11 45 2.56 0 41 6.86 Yes 28 1.85 Yes 40 0.71 Yes -40 0.85 Yes 30 93.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 89788837 + NM_001113378 FANCI 1 1.43 0.69 34 -0.94 69.74 14 4.47 No 68 -3.65 No 0 0 No -21 0.77 Yes 63 51.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 89788986 + NM_001113378 FANCI 1 1.24 0.67 33 6.48 81.46 19 5.66 Yes 6 0.13 No 18 0.63 Yes -25 0.47 No 52 67.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 89805053 + NM_001113378 FANCI 1 0.07 0.14 9 -18.89 0 30 5.13 No 66 0.64 No 20 0.84 Yes -29 0.65 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 89805504 + NM_001113378 FANCI 1 0.11 0.17 11 -4.93 0 10 4 No 44 0.74 No 0 0 No -43 0.89 Yes 27 95.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 89807153 + NM_001113378 FANCI 1 0.2 0.26 16 5.16 84.23 29 5.38 No 16 0.09 No 0 0 No -24 0.67 Yes 46 71.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 89816611 + NM_001113378 FANCI 1 0.07 0.13 8 2.09 0 31 6.41 Yes 18 1.22 Yes 0 0 No -34 0.36 No 40 48.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 89819925 + NM_001113378 FANCI 1 0.09 0.19 11 3.21 77.72 26 3.74 No 9 1.2 Yes 22 0.9 Yes -25 0.86 Yes 45 94.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 89826360 + NM_001113378 FANCI 1 0.4 0.5 31 1.66 0 16 5.91 Yes 42 1.5 Yes 21 0.6 Yes -26 0.38 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 89826362 + NM_001113378 FANCI 1 0.22 0.38 17 -2.75 75.36 18 6.08 Yes 44 1.5 Yes 21 0.6 Yes -28 0.43 No 42 61.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 89838187 + NM_001113378 FANCI 1 0.11 0.25 15 8.48 94.39 22 4.88 No 73 0.71 No 0 0 No -22 0.59 No 48 53.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 89838151 + NM_001113378 FANCI 1 0.17 0.33 17 0.16 0 9 3.87 No 37 0.74 No 0 0 No -50 0.46 No 20 77.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 89838187 + NM_001113378 FANCI 1 3.34 7.01 72 8.48 94.39 22 4.88 No 73 0.71 No 0 0 No -22 0.59 No 48 53.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 89844558 + NM_001113378 FANCI 1 0.09 0.15 10 0.24 82.69 36 7.62 Yes 23 1.98 Yes 0 0 No -35 0.88 Yes 35 95.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89845315 + NM_001113378 FANCI 1 0.14 0.24 14 4.17 88.86 13 4.73 No 0 0.67 No 0 0 No -23 0.65 No 47 83.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 89847103 + NM_001113378 FANCI 1 0.99 1.56 52 0.85 0 16 4.24 No 56 0.79 Yes 0 0 No -15 0.29 No 36 30.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 89848347 + NM_001113378 FANCI 1 0.1 0.19 11 2.89 82.29 35 7.15 Yes 22 1.41 Yes 0 0 No -34 0.85 Yes 36 93.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89848546 + NM_001113378 FANCI 1 0.48 0.6 30 5.71 79.23 26 4.22 No 13 -0.8 No 20 0.89 Yes -25 0.75 Yes 59 39.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 89849240 + NM_001113378 FANCI 1 0.69 1.24 49 1.49 77.72 30 6.77 Yes 57 1.19 Yes 26 0.86 Yes -29 0.74 Yes 41 64.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 89850715 + NM_001113378 FANCI 1 0.18 0.15 9 3.61 0 15 4.22 No 21 0.69 No 0 0 No -33 0.73 Yes 37 71.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 89854877 + NM_001113378 FANCI 1 0.1 0.17 11 9.43 87.94 62 8.88 Yes 49 2.36 Yes 0 0 No -31 0.88 Yes 39 89.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 58415891 - NM_018062 FANCL 1 3.9 1.9 60 6.51 76.71 36 6.32 Yes 76 0.35 No 0 0 No -36 0.54 No 35 69.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 58421409 - NM_018062 FANCL 1 16.97 8.29 72 6.07 95 32 6.46 Yes 37 -3.28 No 26 0.27 Yes -26 0.59 No 44 64.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 58440842 - NM_018062 FANCL 1 5.83 5.25 70 8.86 84.22 42 7.78 Yes 29 1.98 Yes 41 0.41 Yes -41 0.69 Yes 29 82.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 58444570 - NM_018062 FANCL 1 0.82 0.78 30 9.32 82.1 36 6.74 Yes 23 0.87 Yes 0 0 No -35 0.45 No 31 62.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 58449174 - NM_018062 FANCL 1 0.14 0.18 12 -4.66 0 30 5.66 Yes 46 1.07 Yes 0 0 No -29 0.88 Yes 41 94.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 58453918 - NM_018062 FANCL 1 0.36 0.39 24 -5.4 77.39 24 7.31 Yes 73 0.59 No 0 0 No -23 0.84 Yes 47 90.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 58455722 - NM_018062 FANCL 1 0.13 0.11 7 5.65 82.26 23 4.18 No 28 0.28 No 0 0 No -22 0.72 Yes 48 71.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 45618078 + NM_020937 FANCM 1 0.38 0.15 9 5.07 73.2 18 5.91 Yes 5 0.78 Yes 0 0 No -17 0.52 No 41 39.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 45639279 + NM_020937 FANCM 1 1.41 0.32 18 9.85 89.17 18 3.87 No 5 0.84 Yes 0 0 No -26 0.42 No 37 73.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 45647351 + NM_020937 FANCM 1 2.27 0.85 37 2.96 75.87 29 6.24 Yes 16 0.8 Yes 0 0 No -29 0.62 No 41 76.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 45664683 + NM_020937 FANCM 1 0.44 0.17 11 4.63 78.66 49 4.01 No 5 1.05 Yes 31 0.7 Yes -31 0.47 No 39 86.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 13723362 + NM_032228 FAR1 1 0.17 0.24 16 6.23 77.58 25 5.21 No 12 0.83 Yes 0 0 No -24 0.62 No 46 77.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 13728451 + NM_032228 FAR1 1 0.21 0.28 17 10.47 91.38 21 5.54 No 61 0.59 No 0 0 No -20 0.65 No 50 81.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 13733478 + NM_032228 FAR1 1 0.44 0.57 27 -1.77 0 31 5.19 No 50 -3.23 No 0 0 No -31 0.87 Yes 39 89.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 13736522 + NM_032228 FAR1 1 0.47 0.39 19 10.39 98.14 20 7.37 Yes 7 1.56 Yes 0 0 No -30 0.71 Yes 40 71.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 98896744 + NM_001286839 FARP1 1 4.23 0.82 29 11.52 87.59 33 5.66 Yes 59 0.34 No 0 0 No -22 0.84 Yes 48 81.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242314552 + NM_014808 FARP2 1 0.19 0.13 7 6.99 80.12 26 6.08 Yes 13 0.1 No 0 0 No -25 0.92 Yes 45 92.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242334857 + NM_014808 FARP2 1 5.65 3.28 68 11.23 86.79 32 7.08 Yes 56 1.4 Yes 31 0.47 Yes -31 0.59 No 39 61.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242344151 + NM_014808 FARP2 1 0.12 0.11 7 7.44 85.61 20 7.65 Yes 7 1.28 Yes 0 0 No -25 0.76 Yes 40 66.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 242344666 + NM_014808 FARP2 1 0.55 0.44 23 -0.94 82.65 24 7.07 Yes 60 0.5 No 23 0.78 Yes -23 0.51 No 47 55.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242344670 + NM_014808 FARP2 1 1.03 0.76 38 1.46 0 28 7.28 Yes 64 0.5 No 23 0.78 Yes -27 0.59 No 43 63.15 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242352730 + NM_014808 FARP2 1 0.17 0.14 10 -3.39 0 17 3.54 No 15 0.78 Yes 0 0 No -31 0.29 No 43 71.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 242371625 + NM_014808 FARP2 1 0.34 0.29 15 5.48 73.59 61 7.78 Yes 48 1.27 Yes 29 0.82 Yes -29 0.5 No 41 64.33 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242371722 + NM_014808 FARP2 1 0.4 0.35 17 8.45 88.89 18 5.32 No 5 1.47 Yes 0 0 No -27 0.74 Yes 53 87.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242371866 + NM_014808 FARP2 1 2.46 1.92 57 8.84 90.22 24 5 No 66 -3.4 No 0 0 No -23 0.76 Yes 47 79.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242383903 + NM_014808 FARP2 1 4.15 0.19 12 9.83 88.85 26 5.29 No 74 1.5 Yes 0 0 No -25 0.88 Yes 45 96.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242405071 + NM_014808 FARP2 1 2.93 0.15 10 3.35 67.56 43 6.42 Yes 14 1.49 Yes 22 0.72 Yes -26 0.64 No 44 91.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 242405088 + NM_014808 FARP2 1 19.96 1.32 53 7.57 88.28 13 3.79 No 31 1.52 Yes 22 0.72 Yes -22 0.59 No 48 50.41 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 5371384 + NM_001318872 FARS2 1 1.29 0.49 25 2.33 75.72 74 6.22 Yes 66 1.36 Yes 0 0 No -41 0.47 No 14 61.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 5396865 + NM_001318872 FARS2 1 1.23 0.46 23 6.06 77.89 20 4.52 No 7 0.35 No 0 0 No -29 0.4 No 41 55.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 5408348 + NM_001318872 FARS2 1 1.42 0.67 32 7.09 82.97 28 5.57 Yes 36 0.27 No 0 0 No -25 0.45 No 52 37.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 5546510 + NM_001318872 FARS2 1 0.81 0.4 20 10.86 88.27 32 6.42 Yes 31 0.8 Yes 0 0 No -31 0.73 Yes 39 74.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13035619 - NM_004461 FARSA 1 0.24 0.92 34 -1.11 65.85 40 7.6 Yes 27 2.11 Yes 0 0 No -39 0.76 Yes 31 85.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13039412 - NM_004461 FARSA 1 0.06 0.25 14 8.31 80.3 20 4.7 No 29 -0.34 No 0 0 No -32 0.84 Yes 38 74.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 13039747 - NM_004461 FARSA 1 0.03 0.1 7 -7.53 0 24 4.89 No 1 0.04 No 0 0 No -23 0.37 No 57 33.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 223461089 - NR_130154 FARSB 1 0.27 0.76 34 6.06 80.37 34 6.32 Yes 21 1.2 Yes 0 0 No -33 0.77 Yes 37 88.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 223464797 - NR_130154 FARSB 1 0.11 0.33 19 2.32 0 9 3.87 No 16 1.59 Yes 0 0 No -28 0.94 Yes 42 96.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 223478097 - NR_130154 FARSB 1 0.21 0.63 35 3.8 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.68 Yes 51 79.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 223478100 - NR_130154 FARSB 1 0.77 2.21 66 4.31 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -27 0.4 No 54 50.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 223489197 - NR_130154 FARSB 1 0.04 0.13 9 -1.96 79.12 33 5.67 Yes 3 0.64 No 0 0 No -26 0.81 Yes 44 90.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 223489226 - NR_130154 FARSB 1 0.03 0.11 7 -1.27 60.22 39 5.48 No 52 -4.15 No 24 0.87 Yes -26 0.53 No 44 18.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 223493442 - NR_130154 FARSB 1 0.09 0.28 16 5.95 76.03 48 7.81 Yes 35 1.78 Yes 0 0 No -47 0.94 Yes 23 95.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 223493635 - NR_130154 FARSB 1 0.05 0.13 7 3.85 81.61 26 6.33 Yes 31 1.06 Yes 30 0.83 Yes -34 0.65 No 36 75.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 223504411 - NR_130154 FARSB 1 0.16 0.54 22 0.99 0 41 6.9 Yes 28 1.02 Yes 0 0 No -23 0.89 Yes 47 61.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 223507627 - NR_130154 FARSB 1 2.78 0.18 12 5.66 70.8 38 7.16 Yes 25 1.57 Yes 0 0 No -25 0.59 No 33 58.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 223509641 - NR_130154 FARSB 1 12.5 0.83 37 8.47 86.89 25 4.99 No 76 0.86 Yes 0 0 No -24 0.89 Yes 46 94.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 223514115 - NR_130154 FARSB 1 0.06 0.14 9 8.11 90.93 39 5.89 Yes 3 1.23 Yes 0 0 No -22 0.75 Yes 48 71.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 90770262 + NR_135314 FAS 1 0.06 0.39 13 0.98 85.6 19 3.66 No 29 -2.24 No 26 0.6 Yes -21 0.67 Yes 49 58.4 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 90771955 + NR_135314 FAS 1 0.18 0.78 35 2.74 80.7 62 7.57 Yes 49 1.44 Yes 36 0.68 Yes -36 0.67 Yes 34 63.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 90773106 + NR_135314 FAS 1 0.08 0.38 21 -2.57 0 10 4 No 44 1.04 Yes 0 0 No -56 0.67 Yes 21 65.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 90773856 + NR_135314 FAS 1 0.05 0.28 15 -0.14 67.63 23 4.88 No 21 1.33 Yes 22 0.91 Yes -22 0.76 Yes 48 86.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80037892 - NM_004104 FASN 1 0.22 0.54 33 4.67 71 30 5.84 Yes 17 0.63 No 0 0 No -29 0.73 Yes 41 58.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80038451 - NM_004104 FASN 1 0.09 0.28 17 3.46 74.44 24 5 No 27 -1.44 No 22 0.38 Yes -18 0.58 No 52 64.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 80041138 - NM_004104 FASN 1 0.37 1.08 41 3.51 74.41 28 5.74 Yes 15 -1.15 No 0 0 No -27 0.84 Yes 43 67.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80041198 - NM_004104 FASN 1 0.03 0.1 7 3.59 76.3 10 5.19 No 75 -5.09 No 26 0.64 Yes -29 0.86 Yes 41 82.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80042256 - NM_004104 FASN 1 0.04 0.14 10 -2.06 0 23 5.39 No 10 0.68 No 0 0 No -22 0.91 Yes 48 76.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80042588 - NM_004104 FASN 1 0.13 0.35 19 -2.32 0 24 6 Yes 72 0.11 No 0 0 No -29 0.86 Yes 41 86.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80044302 - NM_004104 FASN 1 0.09 0.22 12 7.28 85.73 40 6.4 Yes 27 -1.28 No 0 0 No -26 0.76 Yes 31 66.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80045905 - NM_004104 FASN 1 0.31 0.71 36 -1.94 0 10 3.78 No 18 1.62 Yes 0 0 No -30 0.85 Yes 40 83.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80047278 - NM_004104 FASN 1 0.19 0.33 19 -0.83 79.9 20 4.23 No 19 -0.53 No 23 0.97 Yes -19 0.78 Yes 51 44.64 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 80048398 - NM_004104 FASN 1 0.84 1.36 48 -3.42 0 23 5.39 No 52 0.82 Yes 0 0 No -7 0.42 No 60 30.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80048437 - NM_004104 FASN 1 0.1 0.14 10 3.39 0 26 5.64 Yes 13 0.85 Yes 0 0 No -25 0.66 No 39 63.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80050671 - NM_004104 FASN 1 0.06 0.19 10 7.15 86.54 14 5.2 No 1 1.6 Yes 0 0 No -20 0.62 No 50 78.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 80052064 - NM_004104 FASN 1 0.15 0.38 22 8.42 88.94 23 5.77 Yes 70 1.64 Yes 0 0 No -22 0.92 Yes 48 93.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80054324 - NM_004104 FASN 1 7.21 7.64 70 -3.1 0 24 8.56 Yes 11 1.42 Yes 0 0 No -23 0.67 Yes 47 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80054753 - NM_004104 FASN 1 0.13 0.15 11 6.68 87.38 21 5.19 No 8 0.56 No 0 0 No -20 0.62 No 50 67.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 150774348 - NM_033015 FASTK 1 0.28 0.56 27 -8.16 0 10 4.43 No 62 -3.33 No 26 0.91 Yes -17 0.37 No 51 29.42 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 150774743 - NM_033015 FASTK 1 0.05 0.1 7 5.97 83.42 20 3.8 No NA NA NA 0 0 No -23 0.8 Yes 50 77.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 150775787 - NM_033015 FASTK 1 0.27 0.36 19 -9.22 78.59 21 5 No 8 0.82 Yes 18 0.9 Yes -20 0.93 Yes 50 88.37 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 170388019 - NM_001322046 FASTKD1 1 0.2 0.38 22 3.86 76 27 3.55 No 28 0.47 No 23 0.76 Yes -27 0.53 No 43 42.19 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 170394236 - NM_001322046 FASTKD1 1 0.29 0.29 15 9.01 91.97 16 6.05 Yes 3 1.11 Yes 0 0 No -24 0.61 No 42 76.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 170400303 - NM_001322046 FASTKD1 1 0.15 0.28 14 7.91 98.88 38 8.94 Yes 25 1.87 Yes 0 0 No -37 0.91 Yes 33 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 170405911 - NM_001322046 FASTKD1 1 0.08 0.17 10 2.21 83.24 48 5.85 Yes 35 1.41 Yes 0 0 No -34 0.47 No 36 52.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 170408276 - NM_001322046 FASTKD1 1 0.78 1.5 49 6.15 92.36 15 5.13 No 2 1.04 Yes 0 0 No -26 0.56 No 44 69.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 170422147 - NM_001322046 FASTKD1 1 0.18 0.19 12 7.9 83.72 33 5.75 Yes 68 1.11 Yes 0 0 No -32 0.83 Yes 38 74.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 170425784 - NM_001322046 FASTKD1 1 0.08 0.11 7 -7.2 71.63 75 8.63 Yes 62 0.61 No 27 0.58 Yes -27 0.8 Yes 43 78.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 170427702 - NM_001322046 FASTKD1 1 0.28 0.32 18 3.8 88.13 32 6.11 Yes 19 1.37 Yes 0 0 No -31 0.78 Yes 39 89.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 170428064 - NM_001322046 FASTKD1 1 0.12 0.13 8 3.82 87.5 40 6.64 Yes 27 1.02 Yes 0 0 No -28 0.58 No 42 42.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 207634573 + NM_001136194 FASTKD2 1 0.12 0.26 13 5.81 75.27 24 4.87 No 39 0.08 No 0 0 No -24 0.66 Yes 46 61.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 207634851 + NM_001136194 FASTKD2 1 0.07 0.13 8 3.51 78.69 19 4.52 No 6 0.36 No 0 0 No -18 0.78 Yes 52 81.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 207634871 + NM_001136194 FASTKD2 1 0.14 0.25 15 -1.22 75.65 23 4.65 No 26 0.4 No 0 0 No -22 0.83 Yes 48 82.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 207636907 + NM_001136194 FASTKD2 1 0.06 0.13 8 -16.38 0 37 6.91 Yes 5 0.99 Yes 0 0 No -36 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 207639020 + NM_001136194 FASTKD2 1 0.1 0.18 12 -0.63 72.72 75 8.39 Yes 45 0.68 No 0 0 No -18 0.62 No 52 66.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 207655300 + NM_001136194 FASTKD2 1 1.6 2.72 56 -0.59 0 38 7.39 Yes 25 1.9 Yes 0 0 No -37 0.55 No 33 57.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 7861887 - NM_024091 FASTKD3 1 19.68 8.9 72 6.47 88.49 33 5.37 No 20 1.52 Yes 32 0.89 Yes -32 0.95 Yes 38 96.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 7866810 - NM_024091 FASTKD3 1 0.99 0.11 7 1.5 72.09 73 8.25 Yes 14 0.88 Yes 0 0 No -26 0.49 No 40 59.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 7868146 - NM_024091 FASTKD3 1 9.38 0.74 32 8.27 86 34 4.09 No -4 0.17 No 33 0.63 Yes -20 0.7 Yes 50 77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64888267 - NM_001997 FAU 1 0 0.15 10 1.94 0 15 4.58 No 16 1.69 Yes 0 0 No -32 0.81 Yes 38 80.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64888508 - NM_001997 FAU 1 0 0.14 10 -4.47 0 32 8.43 Yes 19 0.88 Yes 0 0 No -31 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 64889313 - NM_001997 FAU 1 0.02 0.54 24 4.3 75.35 33 5.66 Yes 20 -0.73 No 24 0.97 Yes -32 0.53 No 38 84.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 73913924 - NM_001319193 FBF1 1 2.49 0.28 14 -1.1 0 11 4.12 No 59 1.02 Yes 0 0 No -31 0.76 Yes 39 87.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73918178 - NM_001319193 FBF1 1 14.3 1.42 54 6.2 86.6 31 6 Yes 25 -0.31 No 0 0 No -30 0.63 No 40 65.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73922762 - NM_001319193 FBF1 1 1.08 0.17 11 5.99 88.23 20 4.8 No 7 1.79 Yes 0 0 No -19 0.9 Yes 51 95.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73922963 - NM_001319193 FBF1 1 1.73 0.24 13 1.58 0 23 5.92 Yes 10 2.33 Yes 0 0 No -22 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 73929323 - NM_001319193 FBF1 1 1.82 0.15 10 11.76 91.59 41 7.34 Yes 28 1.21 Yes 0 0 No -27 0.41 No 30 75.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 40325432 - NM_001436 FBL 1 0.03 0.36 21 5.4 79.64 19 5.48 No -3 0.83 Yes 0 0 No -24 0.57 No 46 71.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 40327614 - NM_001436 FBL 1 0.02 0.33 20 9.82 84.99 44 5.79 Yes 35 1.9 Yes 0 0 No -24 0.57 No 27 52.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 40327691 - NM_001436 FBL 1 0.01 0.1 7 8.06 89.09 87 7.45 Yes 29 1.27 Yes 0 0 No -41 0.81 Yes 29 72.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40330941 - NM_001436 FBL 1 0.01 0.14 8 -16.19 0 12 4.24 No 41 1.83 Yes 0 0 No -33 0.76 Yes 37 75.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40330945 - NM_001436 FBL 1 0.05 0.61 33 -1.37 0 30 5.66 Yes 37 1.84 Yes 0 0 No -29 0.85 Yes 41 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40330950 - NM_001436 FBL 1 0.21 2.29 63 -0.05 81.51 25 5.2 No 32 1.86 Yes 0 0 No -24 0.94 Yes 46 94.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40330967 - NM_001436 FBL 1 0.01 0.1 7 -5.46 0 28 6.57 Yes 15 1.88 Yes 0 0 No -27 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 48709061 - NM_000138 FBN1 1 2.37 0.53 28 13.09 82.35 39 6.04 Yes 26 1.08 Yes 0 0 No -38 0.72 Yes 32 70.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 48935299 - NM_000138 FBN1 1 5.03 1.33 47 5.68 81.02 69 5.37 No 4 0.46 No 24 0.4 Yes -30 0.45 No 40 66.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 30671586 + NM_001105079 FBRS 1 0.8 0.75 35 1.18 74.87 26 5.55 No 13 0.94 Yes 0 0 No -25 0.95 Yes 45 92.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30672054 + NM_001105079 FBRS 1 0.23 0.36 21 3.06 79.2 26 6.89 Yes 13 0.38 No 0 0 No -25 0.84 Yes 45 88.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30676040 + NM_001105079 FBRS 1 0.22 0.19 9 0.35 0 32 6.07 Yes 19 0.76 No 0 0 No -31 0.7 Yes 39 64.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 30678839 + NM_001105079 FBRS 1 0.34 0.74 34 -0.47 0 12 4.13 No 41 0.66 No 28 0.93 Yes -15 0.44 No 44 25.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 30680043 + NM_001105079 FBRS 1 0.09 0.22 13 -6.88 0 13 3.45 No 68 -4.79 No 0 0 No -27 0.51 No 43 17.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30680414 + NM_001105079 FBRS 1 0.12 0.21 13 7.39 76.15 28 5.8 Yes 65 1.26 Yes 0 0 No -27 0.47 No 43 43.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133083837 + NM_001142641 FBRSL1 1 1.43 0.15 8 10.68 89.98 46 6.75 Yes 33 1.39 Yes 22 0.92 Yes -22 0.94 Yes 48 95.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133105048 + NM_001142641 FBRSL1 1 1.39 0.31 18 5.76 75.24 27 7.21 Yes 14 2.19 Yes 0 0 No -26 0.9 Yes 44 90.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133119760 + NM_001142641 FBRSL1 1 4.66 1.03 36 -0.39 72.68 23 4.9 No 10 1.35 Yes 0 0 No -22 0.94 Yes 48 58.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 133119850 + NM_001142641 FBRSL1 1 0.68 0.18 12 8.99 86.61 22 5.19 No 52 0.38 No 0 0 No -24 0.62 No 46 61.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133128882 + NM_001142641 FBRSL1 1 0.68 0.1 7 4.19 75.91 26 7.68 Yes 13 1.51 Yes 0 0 No -25 0.75 Yes 45 83.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133145383 + NM_001142641 FBRSL1 1 0.84 0.14 10 8.77 82.02 37 6.61 Yes 58 -0.25 No 0 0 No -25 0.63 No 30 44.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133146494 + NM_001142641 FBRSL1 1 0.87 0.14 8 4.34 71.79 24 5.48 No NA NA NA 24 0.92 Yes -23 0.43 No 47 29.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 133146923 + NM_001142641 FBRSL1 1 58.47 5.38 71 2.44 80.56 21 5.2 No 8 1.28 Yes 0 0 No -20 0.81 Yes 50 80.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133147653 + NM_001142641 FBRSL1 1 2.06 0.13 8 11.59 82.44 24 6.16 Yes 11 1.76 Yes 0 0 No -23 0.98 Yes 47 97.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133147653 + NM_001142641 FBRSL1 1 153.79 11.03 72 11.59 82.44 24 6.16 Yes 11 1.76 Yes 0 0 No -23 0.98 Yes 47 97.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133149055 + NM_001142641 FBRSL1 1 1.11 0.35 18 7.38 92.75 73 9.24 Yes NA NA NA 0 0 No -24 0.92 Yes 46 96.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133157381 + NM_001142641 FBRSL1 1 0.79 0.29 17 7.61 82.47 34 3.97 No 10 0.99 Yes 0 0 No -22 0.74 Yes 48 77.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133157608 + NM_001142641 FBRSL1 1 0.65 0.18 12 4.99 85.93 23 4.88 No 75 0.3 No 0 0 No -22 0.44 No 50 55.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133157898 + NM_001142641 FBRSL1 1 5.11 1.96 61 6.58 88.26 24 6.98 Yes 11 1.58 Yes 0 0 No -23 0.64 No 47 54.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133159220 + NM_001142641 FBRSL1 1 0.29 0.11 8 -1.85 0 18 4.12 No 73 -2.91 No 0 0 No -26 0.6 No 21 43.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133159363 + NM_001142641 FBRSL1 1 0.73 0.21 12 4.16 72.34 26 6.4 Yes 13 1.2 Yes 0 0 No -25 0.96 Yes 45 96.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104181843 + NM_024326 FBXL15 1 4.5 0.75 35 -2.36 70.02 21 9.32 Yes 8 1.81 Yes 0 0 No -20 0.85 Yes 50 79.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104181870 + NM_024326 FBXL15 1 2.36 0.4 23 5.32 73.82 16 5.74 Yes 35 1.84 Yes 0 0 No -15 0.6 No 55 62.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 107239619 - NM_001163315 FBXL17 1 0.47 0.1 7 7.16 78.84 27 6.93 Yes 63 0.44 No 0 0 No -27 0.46 No 41 48.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 107282398 - NM_001163315 FBXL17 1 2.16 0.53 26 5.45 92.6 25 7.57 Yes 29 0.25 No 0 0 No -32 0.34 No 46 52.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 107293837 - NM_001163315 FBXL17 1 0.84 0.14 10 8.75 83.21 24 8.09 Yes 11 1.61 Yes 0 0 No -23 0.89 Yes 47 95.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 107353744 - NM_001163315 FBXL17 1 0.51 0.1 7 11.16 99.55 24 5.47 No 76 0.97 Yes 0 0 No -23 0.86 Yes 47 88.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 107441197 - NM_001163315 FBXL17 1 0.54 0.14 10 10.88 89.44 14 6.12 Yes 1 0.51 No 0 0 No -37 0.26 No 33 42.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 107483218 - NM_001163315 FBXL17 1 1.72 0.39 21 9.12 95.65 32 11.85 Yes 19 2.02 Yes 0 0 No -31 0.45 No 43 64.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 107515114 - NM_001163315 FBXL17 1 1.14 0.22 13 12.35 91.79 18 4.68 No 51 1.06 Yes 0 0 No -25 0.32 No 12 30.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 107515139 - NM_001163315 FBXL17 1 1.33 0.29 17 7.54 86.59 39 7.56 Yes 26 1.07 Yes 0 0 No -38 0.43 No 37 58.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 107520766 - NM_001163315 FBXL17 1 2.4 0.54 29 8.85 80.46 27 6.53 Yes 14 1.73 Yes 0 0 No -26 0.81 Yes 44 83.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 107521387 - NM_001163315 FBXL17 1 0.7 0.19 13 6.49 94.48 16 5.12 No 3 1.06 Yes 0 0 No -22 0.88 Yes 48 91.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 107551884 - NM_001163315 FBXL17 1 0.5 0.18 13 6.51 88.31 53 5.5 No 14 0.46 No 0 0 No -26 0.77 Yes 44 84.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 107635539 - NM_001163315 FBXL17 1 18.27 4.43 71 9.07 88.17 32 6.93 Yes 22 1.09 Yes 0 0 No -34 0.89 Yes 36 90.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 107637758 - NM_001163315 FBXL17 1 0.92 0.19 13 -4.6 0 35 7.85 Yes 38 1.2 Yes 0 0 No -34 0.66 No 36 82.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 107637762 - NM_001163315 FBXL17 1 7.38 1.74 58 7.6 80.03 31 7.6 Yes 34 1.21 Yes 0 0 No -30 0.76 Yes 40 85.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 107679728 - NM_001163315 FBXL17 1 3.37 0.85 38 12.53 91.2 31 6.67 Yes 61 1.1 Yes 0 0 No -31 0.55 No 39 66.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 5521556 - NM_024963 FBXL18 1 0.46 0.13 8 2.52 0 10 4 No 15 2.77 Yes 0 0 No -27 0.7 Yes 43 78.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5528095 - NM_024963 FBXL18 1 0.59 0.17 11 9.65 88.7 29 5.44 No 62 -2.19 No 0 0 No -23 0.55 No 47 50.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 5529844 - NM_024963 FBXL18 1 4.93 1.22 49 10.64 92.47 20 5.1 No 7 1.25 Yes 19 0.79 Yes -19 0.68 Yes 51 75.94 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 5530093 - NM_024963 FBXL18 1 1.31 0.31 18 9.32 85.96 31 4.04 No 22 0.06 No 0 0 No -30 0.62 No 44 59.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 5545146 - NM_024963 FBXL18 1 0.36 0.11 8 2.19 0 15 4.29 No 25 1.26 Yes 0 0 No -37 0.71 Yes 33 71.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5545225 - NM_024963 FBXL18 1 0.89 0.19 11 3.11 78.47 16 4.42 No 27 -3.16 No 0 0 No -24 0.33 No 43 50.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30958079 + NM_001099784 FBXL19 1 1.38 0.68 33 3.23 79.31 26 5 No 38 2.25 Yes 0 0 No -50 0.38 No 20 23.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 30958104 + NM_001099784 FBXL19 1 0.56 0.28 15 1.8 80.64 11 4.9 No 63 2.25 Yes 0 0 No -17 0.31 No 49 21.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 30958157 + NM_001099784 FBXL19 1 2.66 1.4 50 3.6 71.36 43 6.86 Yes 30 1.43 Yes 42 0.62 Yes -42 0.8 Yes 28 94.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30958352 + NM_001099784 FBXL19 1 1.55 1.18 45 4.94 76.85 17 5.25 No 4 0.62 No 22 0.92 Yes -27 0.61 No 43 72.68 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 30959168 + NM_001099784 FBXL19 1 0.17 0.14 9 10.92 85.44 26 7.28 Yes 13 1.2 Yes 25 0.91 Yes -25 0.81 Yes 45 81.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 37415550 - NM_001184906 FBXL20 1 0.65 0.17 10 8.81 87.44 47 4.93 No 59 0.9 Yes 29 0.74 Yes -29 0.77 Yes 41 79.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 37472845 - NM_001184906 FBXL20 1 1.02 0.17 11 10.53 92.27 32 5.16 No 19 1.19 Yes 0 0 No -27 0.81 Yes 43 86.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77585851 - NM_012158 FBXL3 1 0.81 0.75 32 4.19 0 38 6.09 Yes 28 1.19 Yes 0 0 No -31 0.84 Yes 39 79.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77585855 - NM_012158 FBXL3 1 0.63 0.54 27 2.3 84.41 34 5.76 Yes 24 1.2 Yes 0 0 No -27 0.85 Yes 43 80.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77595283 - NM_012158 FBXL3 1 0.16 0.13 9 9.84 93.71 22 5.49 No 9 0.65 No 0 0 No -22 0.65 No 49 60.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99352063 - NM_001278716 FBXL4 1 0.24 0.14 8 8.42 85.05 23 7.89 Yes 61 0.62 No 0 0 No -22 0.68 Yes 39 50.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 99365447 - NM_001278716 FBXL4 1 1.4 0.58 31 0.81 62.72 35 6.16 Yes 76 -2.21 No 0 0 No -34 0.66 Yes 36 62.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 99367798 - NM_001278716 FBXL4 1 0.62 0.28 17 4.69 90.17 23 4.9 No 58 -2.96 No 0 0 No -22 0.5 No 48 50.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99374463 - NM_001278716 FBXL4 1 2.29 0.97 44 5.44 84.76 39 4.81 No 26 -1.37 No 0 0 No -26 0.67 Yes 44 66.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 15632418 - NM_001193535 FBXL5 1 1.88 1.14 50 -10.02 74.65 38 7.03 Yes 25 0.91 Yes 29 0.56 Yes -32 0.49 No 38 68.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 15638294 - NM_001193535 FBXL5 1 0.65 0.64 32 -2.64 0 14 3.86 No 16 0.77 No 22 0.65 Yes -29 0.48 No 41 83.31 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 15638297 - NM_001193535 FBXL5 1 0.41 0.44 23 1.32 79.88 26 5.57 Yes 13 0.79 Yes 22 0.65 Yes -26 0.56 No 44 83.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 15643251 - NM_001193535 FBXL5 1 2.21 1.9 60 5.84 83.77 32 8.6 Yes 4 0.3 No 24 0.51 Yes -32 0.67 Yes 39 83.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145580210 - NM_024555 FBXL6 1 1.03 0.53 27 8.19 81.16 21 7.55 Yes 8 0.81 Yes 20 0.81 Yes -29 0.57 No 50 87.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 37522486 - NM_012166 FBXO10 1 4.46 1.08 38 6.21 90.47 30 7.6 Yes 17 2.14 Yes 0 0 No -29 0.8 Yes 41 86.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48045744 - NM_001190274 FBXO11 1 0.27 0.22 10 8.25 85.98 25 4.9 No 36 -2.19 No 0 0 No -24 0.63 No 46 53.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48053046 - NM_001190274 FBXO11 1 0.84 0.72 32 8.01 87.12 25 4.32 No 29 -1.83 No 0 0 No -24 0.65 No 42 80.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48063769 - NM_001190274 FBXO11 1 0.11 0.13 8 6.43 80.19 22 5.17 No 52 0.45 No 0 0 No -31 0.71 Yes 39 61.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48066140 - NM_001190274 FBXO11 1 3.81 3.26 69 3.59 86.36 31 5.73 Yes 3 1.02 Yes 0 0 No -23 0.52 No 47 70.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48080503 - NM_001190274 FBXO11 1 0.59 0.21 12 5.12 76.92 37 6.05 Yes 72 0.52 No 0 0 No -28 0.37 No 39 41.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 5939194 + NM_032807 FBXO18 1 3.18 0.26 12 5.58 82.98 32 6.68 Yes 19 0.3 No 0 0 No -31 0.92 Yes 39 97.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 5939334 + NM_032807 FBXO18 1 1.17 0.1 7 0.84 76.06 23 3.66 No 22 -3.46 No 0 0 No -22 0.71 Yes 48 60.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 5947180 + NM_032807 FBXO18 1 2.22 2.18 61 9.25 89.04 49 7.15 Yes 36 1.18 Yes 28 0.47 Yes -28 0.46 No 41 45.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 5947743 + NM_032807 FBXO18 1 0.12 0.11 7 8.66 98.14 34 4.13 No 58 1.27 Yes 0 0 No -32 0.82 Yes 38 90.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 5952947 + NM_032807 FBXO18 1 0.11 0.11 8 5.55 84.27 42 5.53 No 29 -1.69 No 0 0 No -41 0.59 No 29 59.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 5955746 + NM_032807 FBXO18 1 2.8 2.97 64 7.08 87.33 33 6.78 Yes 47 1.27 Yes 0 0 No -27 0.71 Yes 43 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 5963388 + NM_032807 FBXO18 1 0.13 0.22 14 7.31 74.1 36 6.08 Yes 41 0.55 No 26 0.66 Yes -33 0.67 Yes 37 68.14 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 5966713 + NM_032807 FBXO18 1 5.34 5.35 70 5.6 86.16 21 5.2 No 64 0.24 No 20 0.31 Yes -20 0.53 No 50 69.68 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 5970298 + NM_032807 FBXO18 1 0.26 0.31 16 6.3 86.44 24 5.19 No 11 1.25 Yes 23 0.96 Yes -23 0.81 Yes 47 90.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 5970300 + NM_032807 FBXO18 1 0.07 0.1 7 0.09 83.39 26 5.37 No 13 1.24 Yes 0 0 No -25 0.75 Yes 45 90.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 5979047 + NM_032807 FBXO18 1 0.58 0.74 37 7.17 78.84 51 7.47 Yes 38 1.34 Yes 27 0.92 Yes -24 0.65 No 46 75.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 5979074 + NM_032807 FBXO18 1 0.07 0.1 7 -9.6 63.22 30 6 Yes 65 1.33 Yes 0 0 No -29 0.88 Yes 41 92.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 117586194 - NM_033624 FBXO21 1 0.24 0.14 9 4.81 82.77 25 5.23 No 45 0.85 Yes 0 0 No -28 0.64 No 46 73.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 117595869 - NM_033624 FBXO21 1 182.57 40.35 72 11.44 85.28 31 5.38 No 60 1.02 Yes 23 0.51 Yes -30 0.54 No 40 72.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 117603577 - NM_033624 FBXO21 1 0.25 0.14 8 6.32 84.56 31 4.7 No 60 0.33 No 0 0 No -24 0.84 Yes 40 84.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 117617388 - NM_033624 FBXO21 1 0.35 0.31 15 7.29 85.34 27 5.39 No 74 0.77 Yes 0 0 No -26 0.96 Yes 44 97.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 117626599 - NM_033624 FBXO21 1 0.5 0.35 20 11.53 92.18 37 5.08 No 15 0.81 Yes 27 0.91 Yes -27 0.86 Yes 43 83.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 76197918 + NM_147188 FBXO22 1 0.58 1.1 45 8.15 88.94 27 6.91 Yes 14 1.68 Yes 26 0.91 Yes -26 0.83 Yes 44 75.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 76209689 + NM_147188 FBXO22 1 0.42 1.17 45 7.43 84.4 28 5.33 No -1 0.01 No 0 0 No -20 0.37 No 50 42.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 76217365 + NM_147188 FBXO22 1 0.06 0.24 13 9.19 90.93 16 5.91 Yes 3 0.65 No 0 0 No -31 0.59 No 51 48.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 382885 + NM_012173 FBXO25 1 797.95 64.26 72 6.09 86.31 14 4.26 No 1 0.6 No 25 0.51 Yes -25 0.62 No 45 32.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 390337 + NM_012173 FBXO25 1 1.64 1.26 41 3.46 86.53 14 5.73 Yes 1 0.39 No 0 0 No -26 0.74 Yes 45 77.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 390340 + NM_012173 FBXO25 1 0.83 0.63 31 -5.48 83.32 17 5.98 Yes 4 0.37 No 0 0 No -29 0.67 Yes 42 77.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 413075 + NM_012173 FBXO25 1 0.37 0.19 11 5.72 84.98 30 3.94 No 6 0.74 No 0 0 No -29 0.79 Yes 41 43.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 417719 + NM_012173 FBXO25 1 3.19 1.6 49 6.39 75.91 71 7.59 Yes 58 2 Yes 23 0.81 Yes -23 0.4 No 31 61.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 224326467 + NM_015176 FBXO28 1 0.17 0.18 10 9.09 87.44 36 7.87 Yes 66 0.14 No 0 0 No -35 0.84 Yes 35 70.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224343472 + NM_015176 FBXO28 1 0.13 0.15 10 -9.46 75.19 22 5.91 Yes 9 1.18 Yes 0 0 No -28 0.7 Yes 42 84.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224343490 + NM_015176 FBXO28 1 1.22 1.42 41 2.53 78.39 21 3.83 No 27 1.17 Yes 0 0 No -24 0.92 Yes 46 95.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 33764705 - NM_012175 FBXO3 1 3.98 0.74 36 0.8 84.03 13 4.89 No 0 0.74 No 0 0 No -21 0.64 No 49 39.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 33767606 - NM_012175 FBXO3 1 81.94 15.86 72 9.57 90.03 33 7.96 Yes 20 0.95 Yes 26 0.89 Yes -26 0.82 Yes 44 93.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 33768040 - NM_012175 FBXO3 1 0.71 0.14 10 2.3 64 24 5.88 Yes 70 -4.65 No 0 0 No -23 0.74 Yes 47 57.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 33768202 - NM_012175 FBXO3 1 1.28 0.24 14 10.45 81.03 34 5.59 Yes 71 0.14 No 23 0.59 Yes -23 0.59 No 47 80.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 33784833 - NM_012175 FBXO3 1 2.81 1.21 50 7.55 85 30 6.24 Yes 17 0.88 Yes 29 0.59 Yes -30 0.71 Yes 40 76.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 33790514 - NM_012175 FBXO3 1 0.34 0.11 7 6.24 80.4 25 5.57 Yes 54 1.14 Yes 0 0 No -24 0.86 Yes 46 87.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 146121432 - NM_032145 FBXO30 1 0.16 0.11 8 -0.83 61.51 22 4.8 No 36 1.3 Yes 0 0 No -33 0.8 Yes 37 71.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 146121459 - NM_032145 FBXO30 1 0.17 0.14 8 2.2 59.99 22 6.68 Yes 9 1.29 Yes 19 0.76 Yes -27 0.58 No 43 71.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 87369868 - NM_001282683 FBXO31 1 0.43 0.14 9 -18.01 67.65 23 6.95 Yes 10 1.34 Yes 0 0 No -25 0.93 Yes 45 93.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 87392104 - NM_001282683 FBXO31 1 12.75 4.79 68 11.53 89.22 28 5.77 Yes 15 0.49 No 0 0 No -27 0.93 Yes 43 96.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 39881930 - NM_203301 FBXO33 1 0.28 0.14 9 4.67 85.92 34 9.05 Yes 21 1.26 Yes 0 0 No -24 0.56 No 37 70.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 147764318 + NM_001271723 FBXO38 1 2.8 1.89 60 10.96 92.93 32 4.43 No 59 0.16 No 35 0.53 Yes -27 0.79 Yes 43 80.75 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 147777181 + NM_001271723 FBXO38 1 0.77 0.94 40 5.3 73.74 43 7.2 Yes 30 0.75 No 25 0.44 Yes -35 0.61 No 35 57.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 147778577 + NM_001271723 FBXO38 1 0.71 0.86 38 7.44 89.06 23 5 No 48 0.85 Yes 26 0.43 Yes -22 0.95 Yes 48 97.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 147787181 + NM_001271723 FBXO38 1 2.08 1.94 60 6.66 76.26 35 5.85 Yes 16 0.36 No 0 0 No -28 0.38 No 36 45.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 147789770 + NM_001271723 FBXO38 1 0.17 0.15 10 11.17 89.11 28 6.59 Yes 56 1.33 Yes 25 0.9 Yes -31 0.62 No 39 77.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 147790013 + NM_001271723 FBXO38 1 0.23 0.18 12 8.32 91.44 23 5.94 Yes 10 1.22 Yes 0 0 No -22 0.9 Yes 48 88.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 147790642 + NM_001271723 FBXO38 1 2.87 1.38 51 9.11 91.81 14 4.59 No 47 0.32 No 0 0 No -39 0.63 No 47 60.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 147794803 + NM_001271723 FBXO38 1 2.2 1.24 45 5.21 86.42 43 7.81 Yes 30 0.86 Yes 0 0 No -36 0.84 Yes 34 81.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 147805141 + NM_001271723 FBXO38 1 1.2 0.89 40 4.75 81.4 32 5.91 Yes 72 0.89 Yes 0 0 No -25 0.33 No 45 31.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 147806772 + NM_001271723 FBXO38 1 5.39 0.88 37 4.01 80.44 43 7.77 Yes 30 1.06 Yes 31 0.05 Yes -42 0.71 Yes 28 73.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 147806775 + NM_001271723 FBXO38 1 447.69 68.06 72 4.84 83.84 46 7.96 Yes 33 1.05 Yes 31 0.05 Yes -45 0.69 Yes 25 74.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 147817968 + NM_001271723 FBXO38 1 0.7 0.51 31 3.11 74.89 22 4.49 No 34 -3.78 No 0 0 No -27 0.46 No 43 42.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 41928619 + NM_012176 FBXO4 1 0.47 0.22 15 5.2 85.02 18 7 Yes 5 1.23 Yes 28 0.28 Yes -17 0.44 No 53 81.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 41929926 + NM_012176 FBXO4 1 0.28 0.13 9 6.34 80.74 28 4.52 No 49 0.79 Yes 0 0 No -26 0.47 No 44 56.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 41939644 + NM_012176 FBXO4 1 0.46 0.19 10 7.09 86.22 18 6.33 Yes 49 0.94 Yes 0 0 No -29 0.72 Yes 41 78.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 41940390 + NM_012176 FBXO4 1 1.71 0.42 22 8.01 98.64 31 7.24 Yes 18 0.87 Yes 0 0 No -30 0.72 Yes 40 68.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 41941299 + NM_012176 FBXO4 1 5.37 1.13 44 -2.53 0 9 3.87 No 21 1.36 Yes 0 0 No -33 0.69 Yes 37 84.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73487163 - NM_001080410 FBXO41 1 1.07 0.39 25 6.85 79.99 27 5.53 No 14 0.1 No 0 0 No -32 0.75 Yes 45 53.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 73487264 - NM_001080410 FBXO41 1 1.89 0.82 38 5.36 71.62 25 5.57 Yes 12 1.32 Yes 0 0 No -24 0.86 Yes 46 80.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73487983 - NM_001080410 FBXO41 1 0.44 0.19 14 2.31 0 30 6.86 Yes 17 2.21 Yes 0 0 No -29 0.93 Yes 41 94.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73493456 - NM_001080410 FBXO41 1 5.17 0.96 38 4.76 75.47 74 8.23 Yes 30 1.1 Yes 0 0 No -35 0.69 Yes 35 87.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73493459 - NM_001080410 FBXO41 1 6.51 1.15 46 5.59 86.55 71 8.14 Yes 27 1.11 Yes 0 0 No -32 0.72 Yes 38 86.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73493807 - NM_001080410 FBXO41 1 3.84 0.81 37 -10.66 0 25 5.39 No 25 -1.8 No 0 0 No -24 0.69 Yes 44 36.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 16579677 - NM_018994 FBXO42 1 1.37 0.56 29 8.06 87.27 21 5.2 No 73 0.92 Yes 20 0.57 Yes -20 0.82 Yes 50 78.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 16582320 - NM_018994 FBXO42 1 0.19 0.13 9 1.27 0 31 6.97 Yes 18 2.24 Yes 33 0.89 Yes -22 0.47 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 16587662 - NM_018994 FBXO42 1 2.16 1.51 51 9.92 84.21 21 5.73 Yes 8 0.46 No 0 0 No -20 0.42 No 37 47.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 16612886 - NM_018994 FBXO42 1 0.14 0.11 8 1.22 63.56 54 7.62 Yes 12 1.18 Yes 0 0 No -24 0.77 Yes 46 56.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 16622718 - NM_018994 FBXO42 1 0.3 0.21 10 -3.96 53.37 52 7.95 Yes 39 0.43 No 0 0 No -56 0.59 No 18 87.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 16636853 - NM_018994 FBXO42 1 1.12 0.75 38 13.44 95.65 26 6.08 Yes 13 1.38 Yes 0 0 No -25 0.84 Yes 45 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16643064 - NM_018994 FBXO42 1 17.32 4.6 63 2.36 79.93 19 7.07 Yes 6 1.13 Yes 0 0 No -27 0.68 Yes 43 80.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16643067 - NM_018994 FBXO42 1 12.48 3.32 61 4.77 85.22 16 6.86 Yes 3 1.16 Yes 0 0 No -24 0.73 Yes 46 86.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16643153 - NM_018994 FBXO42 1 1.05 0.28 15 7.13 89.75 22 6.58 Yes 9 1.19 Yes 0 0 No -21 0.95 Yes 49 91.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16643223 - NM_018994 FBXO42 1 1.21 0.32 21 0.27 84.41 34 7.75 Yes 21 0.68 No 0 0 No -30 0.74 Yes 40 90.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 16655277 - NM_018994 FBXO42 1 5.57 1.44 53 8.96 79.21 27 6.03 Yes 14 0.74 No 0 0 No -26 0.94 Yes 44 93.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 16655345 - NM_018994 FBXO42 1 1.6 0.38 20 11.51 92 33 5.16 No 69 -1.69 No 0 0 No -27 0.49 No 46 55.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 16676325 - NM_018994 FBXO42 1 0.65 0.17 10 8.59 93.31 28 5.29 No 36 1.53 Yes 0 0 No -27 0.53 No 47 48.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 11719302 + NM_001014765 FBXO44 1 0.42 0.24 13 0.91 68.56 45 6.5 Yes 36 1.09 Yes 0 0 No -23 0.68 Yes 47 65.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 196306262 + NM_001105573 FBXO45 1 0.54 0.32 18 10.75 83.95 14 5.31 No 1 1.2 Yes 0 0 No -28 0.95 Yes 42 96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46216801 - NM_001080469 FBXO46 1 0.45 0.22 14 5.11 69.68 13 5.2 No NA NA NA 0 0 No -26 0.56 No 18 40.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46226964 - NM_001080469 FBXO46 1 0.87 0.39 21 2.65 69.25 23 4.57 No 58 -3.67 No 0 0 No -22 0.74 Yes 48 80.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46227081 - NM_001080469 FBXO46 1 0.34 0.17 11 -3.23 47.71 34 7.04 Yes 21 0.64 No 0 0 No -33 0.4 No 29 24.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46227144 - NM_001080469 FBXO46 1 6.99 3.17 71 -1.64 0 37 6.56 Yes 61 1.1 Yes 0 0 No -39 0.61 No 31 82.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 46227149 - NM_001080469 FBXO46 1 0.85 0.39 20 -4.34 69.45 32 6.16 Yes 56 1.11 Yes 0 0 No -34 0.63 No 36 82.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 68693603 - NR_133923 FBXO48 1 76.01 6.75 72 -3.16 61.92 47 7.98 Yes 34 2.21 Yes 36 0.82 Yes -46 0.67 Yes 24 94.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 153293552 - NM_012177 FBXO5 1 0.05 0.11 7 5.34 76.11 26 5.95 Yes 6 0.92 Yes 0 0 No -32 0.45 No 38 43.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 153298174 - NM_012177 FBXO5 1 0.66 0.32 17 5.91 78.21 24 6.28 Yes 0 1.31 Yes 0 0 No -23 0.88 Yes 47 95.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11727261 + NM_018438 FBXO6 1 0.5 0.25 13 10.16 84.92 24 5.4 No 57 -2.4 No 0 0 No -24 0.6 No 46 73.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 32875119 + NM_001257990 FBXO7 1 123.87 20.44 72 8.56 83.75 19 4.89 No 6 1.14 Yes 26 0.71 Yes -18 0.52 No 45 58.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 32879887 + NM_001257990 FBXO7 1 0.03 0.11 8 3.69 0 32 6.41 Yes 19 1.01 Yes 0 0 No -31 0.38 No 39 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 175171194 - NM_012180 FBXO8 1 0.5 0.29 17 5.2 82.22 21 6.02 Yes 8 1.54 Yes 0 0 No -31 0.77 Yes 39 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 175184244 - NM_012180 FBXO8 1 0.55 0.21 14 3.03 0 11 4.12 No 25 0.28 No 0 0 No -26 0.54 No 42 50.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 175188697 - NM_012180 FBXO8 1 0.43 0.18 9 7.89 85.67 43 6.29 Yes 30 1.63 Yes 0 0 No -24 0.64 No 46 56.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 52943578 + NM_033481 FBXO9 1 0.14 0.19 11 -2.29 0 14 4.24 No 65 -4.94 No 24 0.94 Yes -29 0.47 No 41 39.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 52949486 + NM_033481 FBXO9 1 0.25 0.22 13 2.46 82.9 22 4.69 No 57 0.04 No 0 0 No -20 0.56 No 50 55.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 52954456 + NM_033481 FBXO9 1 1.36 1.17 50 6.59 89.55 25 5.29 No 12 0.26 No 0 0 No -24 0.89 Yes 46 83.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 52954540 + NM_033481 FBXO9 1 0.23 0.19 11 3.74 76.38 17 4.89 No 4 0.16 No 0 0 No -21 0.63 No 49 56.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 52957228 + NM_033481 FBXO9 1 0.33 0.29 16 -2.02 81.08 25 6.46 Yes 12 0.95 Yes 0 0 No -28 0.64 No 46 58.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 52959489 + NM_033481 FBXO9 1 0.3 0.42 22 1.36 77.51 53 7.37 Yes 3 0.54 No 32 0.4 Yes -35 0.33 No 35 40.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 171295049 - NM_012300 FBXW11 1 0.1 0.15 10 9 91.98 23 5.29 No 56 1.25 Yes 23 0.78 Yes -29 0.72 Yes 47 66.14 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 171295154 - NM_012300 FBXW11 1 0.08 0.11 7 7.13 82.5 67 10.52 Yes 54 0.62 No 24 0.74 Yes -33 0.43 No 15 53.69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 123531555 - NM_012164 FBXW2 1 0.07 0.1 7 7.8 74.42 44 6.71 Yes 76 0.16 No 0 0 No -38 0.58 No 27 42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123535115 - NM_012164 FBXW2 1 0.1 0.14 9 -1.78 0 24 6.09 Yes 11 1.03 Yes 0 0 No -23 0.73 Yes 47 70.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123539300 - NM_012164 FBXW2 1 0.9 0.92 40 8.06 83.92 23 6.28 Yes 63 1.28 Yes 0 0 No -22 0.63 No 48 74.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 123550465 - NM_012164 FBXW2 1 28.9 18.29 72 7.2 73.56 39 7.29 Yes 0 0.98 Yes 27 0.65 Yes -38 0.43 No 32 64.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 123551206 - NM_012164 FBXW2 1 0.24 0.17 12 7.26 82.67 30 5.92 Yes 5 0.46 No 0 0 No -32 0.74 Yes 38 79.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123555294 - NM_012164 FBXW2 1 0.67 0.47 27 5.37 75.02 30 6.32 Yes 17 0.65 No 0 0 No -25 0.6 No 41 60.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 103372295 - NM_022039 FBXW4 1 0.11 0.13 8 4.55 76.41 14 5.19 No 59 1.42 Yes 0 0 No -21 0.62 No 49 46.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 103372313 - NM_022039 FBXW4 1 0.13 0.13 9 -0.24 74.05 24 4.8 No 41 1.43 Yes 0 0 No -23 0.63 No 47 41.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 103372339 - NM_022039 FBXW4 1 0.51 0.47 28 3.98 0 14 4.47 No 15 1.48 Yes 0 0 No -27 0.56 No 43 70.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 103417390 - NM_022039 FBXW4 1 0.66 0.58 29 3.01 0 35 6.4 Yes 22 1.12 Yes 0 0 No -34 0.91 Yes 36 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103419179 - NM_022039 FBXW4 1 0.16 0.15 9 10.23 90.64 17 6.16 Yes 27 -0.57 No 0 0 No -28 0.65 No 42 66.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 103433427 - NM_022039 FBXW4 1 0.39 0.4 24 1.96 0 35 7.3 Yes 22 0.7 No 0 0 No -37 0.54 No 33 60.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139835525 - NM_018998 FBXW5 1 0.06 0.11 7 -1.17 0 13 3.67 No 0 0.51 No 0 0 No -17 0.79 Yes 53 47.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 139835564 - NM_018998 FBXW5 1 1.93 2.86 64 4.97 82.69 17 7.13 Yes 68 1.09 Yes 0 0 No -17 0.61 No 53 57.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139835930 - NM_018998 FBXW5 1 0.75 1.11 47 -2.26 0 14 5.39 No 76 -0.91 No 21 0.79 Yes -22 0.33 No 63 17.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 139837165 - NM_018998 FBXW5 1 0.08 0.14 8 -3.17 0 14 4.24 No 23 1.64 Yes 19 0.39 Yes -35 0.88 Yes 35 65.24 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 139837358 - NM_018998 FBXW5 1 0.51 0.93 44 5.18 76.87 21 6.24 Yes 8 1.71 Yes 0 0 No -20 0.82 Yes 50 64.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 139837426 - NM_018998 FBXW5 1 0.97 1.85 57 3.94 71.69 11 5.74 Yes 30 0.02 No 29 0.77 Yes -29 0.79 Yes 41 66.71 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 139837450 - NM_018998 FBXW5 1 0.47 0.92 39 -3.82 0 12 3.65 No 32 -2.23 No 29 0.77 Yes -18 0.5 No 52 71.92 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 139837456 - NM_018998 FBXW5 1 0.06 0.13 7 -0.54 69.41 13 5.57 Yes 0 0.16 No 24 0.59 Yes -26 0.33 No 58 43.02 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 139838060 - NM_018998 FBXW5 1 0.18 0.21 12 -0.61 0 16 4.36 No 30 0.41 No 0 0 No -15 0.69 Yes 55 56.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 117356335 + NM_012174 FBXW8 1 4.69 0.36 22 6.97 84.16 34 7.52 Yes 71 1.38 Yes 0 0 No -33 0.55 No 37 68.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 117372260 + NM_012174 FBXW8 1 0.46 0.17 10 11.7 94.57 32 7.18 Yes 34 1.03 Yes 0 0 No -34 0.5 No 36 53.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 117442240 + NM_012174 FBXW8 1 3.5 0.88 41 6.54 83.72 26 5.02 No 65 0.54 No 0 0 No -25 0.66 No 45 82.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 117442353 + NM_012174 FBXW8 1 1.75 0.44 25 2.86 77.27 22 4.97 No 61 -2.36 No 0 0 No -21 0.86 Yes 49 83.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 117462009 + NM_012174 FBXW8 1 0.7 0.19 10 6.55 80.33 30 6.56 Yes 17 1.46 Yes 0 0 No -29 0.71 Yes 41 79.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7754330 - NM_002002 FCER2 1 0.11 0.71 31 2.69 66.67 55 7.68 Yes -4 1.62 Yes 21 0.95 Yes -24 0.63 No 30 58.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 7755170 - NM_002002 FCER2 1 0.18 1.89 52 0.61 0 11 4.12 No NA NA NA 20 0.46 Yes -32 0.56 No 50 29.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 7755210 - NM_002002 FCER2 1 0.02 0.14 9 1.5 67.23 27 5.76 Yes NA NA NA 0 0 No -21 0.56 No 49 37.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 7755376 - NM_002002 FCER2 1 0.06 0.75 33 -2.63 69.32 26 5.2 No 21 -1.66 No 0 0 No -25 0.72 Yes 45 56.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 7762474 - NM_002002 FCER2 1 0.04 0.36 19 -22.24 0 40 6.78 Yes 27 -0.3 No 0 0 No -39 0.64 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 7762603 - NM_002002 FCER2 1 0.01 0.11 7 4.06 83.81 22 5.29 No 9 0.66 No 0 0 No -21 0.5 No 49 65.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 7763739 - NM_002002 FCER2 1 0.11 0.68 34 -6.43 60.83 23 4.95 No 27 1 Yes 0 0 No -22 0.56 No 48 60.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7763759 - NM_002002 FCER2 1 0.02 0.13 8 -2.01 0 20 5.65 Yes 7 1.01 Yes 20 0.68 Yes -25 0.57 No 45 35.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 7763763 - NM_002002 FCER2 1 0.02 0.13 7 4.86 70.54 16 5.29 No 3 1 Yes 20 0.68 Yes -21 0.58 No 49 64.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 7764728 - NM_002002 FCER2 1 8.53 16.75 72 -3.71 0 28 5.24 No 15 0.21 No 0 0 No -27 0.83 Yes 37 57.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75181579 + NM_001318508 FCF1 1 0.28 0.4 20 -0.03 0 58 5.61 Yes 9 0.39 No 0 0 No -25 0.62 No 45 56.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75182523 + NM_001318508 FCF1 1 1.4 2.89 67 13.23 85.31 32 5.47 No 19 0.92 Yes 26 0.66 Yes -26 0.51 No 44 62.69 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 75182696 + NM_001318508 FCF1 1 0.68 1.4 52 4 66.79 38 6.96 Yes 66 0.86 Yes 22 0.81 Yes -37 0.47 No 33 78.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 161641184 + NM_004001 FCGR2B 1 26.28 9.49 72 6.28 78.71 31 6.92 Yes 18 0.83 Yes 0 0 No -30 0.87 Yes 40 94.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161641701 + NM_004001 FCGR2B 1 1.93 0.29 19 5.39 81.17 26 7.13 Yes 13 0.28 No 0 0 No -28 0.91 Yes 42 94.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17865930 + NM_015122 FCHO1 1 4.71 1 41 5.66 0 37 5.92 Yes 24 0.74 No 20 0.76 Yes -24 0.91 Yes 46 86.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17877379 + NM_015122 FCHO1 1 0.44 0.26 17 2.66 75.1 24 3.83 No 65 0.72 No 23 0.5 Yes -26 0.42 No 44 54.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 17877382 + NM_015122 FCHO1 1 0.29 0.19 13 4.92 88.79 27 4.05 No 68 0.72 No 0 0 No -25 0.38 No 41 49.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17881272 + NM_015122 FCHO1 1 1.79 1.19 45 4.69 80 22 5.29 No 48 0.2 No 21 0.64 Yes -21 0.75 Yes 49 67.93 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 17886795 + NM_015122 FCHO1 1 0.58 0.31 17 -9.35 0 17 4.24 No 43 0.96 Yes 0 0 No -11 0.57 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17888316 + NM_015122 FCHO1 1 0.54 0.18 10 4.73 81.37 28 5.83 Yes 58 -4.41 No 0 0 No -27 0.51 No 43 47.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17889534 + NM_015122 FCHO1 1 1.61 0.75 39 5.34 80.77 25 7.62 Yes NA NA NA 0 0 No -24 0.71 Yes 46 75.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17894094 + NM_015122 FCHO1 1 0.58 0.35 17 10.38 88.27 50 7.48 Yes 37 1.14 Yes 0 0 No -33 0.62 No 43 55.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17894964 + NM_015122 FCHO1 1 0.23 0.15 9 3.38 68.23 31 5.45 No 24 0.59 No 0 0 No -30 0.46 No 46 34.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17895554 + NM_015122 FCHO1 1 0.64 0.35 18 5.85 68.91 24 5.48 No 26 1.36 Yes 0 0 No -56 0.4 No 32 85.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17899078 + NM_015122 FCHO1 1 2.47 0.88 39 10.68 80.35 18 5.33 No 74 -2.46 No 30 0.59 Yes -30 0.64 No 40 46.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 141022071 - NM_033449 FCHSD1 1 3.01 0.43 25 8.67 81.19 20 4.17 No 48 2.06 Yes 28 0.78 Yes -28 0.88 Yes 42 88.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 141024506 - NM_033449 FCHSD1 1 3.16 0.56 30 0.66 0 26 6.24 Yes 13 1.04 Yes 21 0.68 Yes -25 0.75 Yes 45 75.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 141026373 - NM_033449 FCHSD1 1 0.74 0.13 7 1.3 83.11 44 6.71 Yes 70 1.08 Yes 0 0 No -34 0.56 No 32 82.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 141027994 - NM_033449 FCHSD1 1 0.69 0.17 10 0.8 72.65 21 5.19 No -3 0.34 No 0 0 No -20 0.91 Yes 50 86.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 141028103 - NM_033449 FCHSD1 1 5.02 1.08 49 3.96 76.54 23 4.8 No 64 -6.15 No 0 0 No -22 0.82 Yes 48 39.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 141030151 - NM_033449 FCHSD1 1 1.03 0.18 13 7.23 86.55 25 4.4 No 74 -3.49 No 0 0 No -19 0.66 Yes 51 79.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 72552004 - NM_014824 FCHSD2 1 0.07 0.11 7 -10.31 0 31 5.36 No 13 0.6 No 0 0 No -25 0.32 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 72553911 - NM_014824 FCHSD2 1 0.24 0.54 25 5.89 80.97 14 5.05 No 58 0.87 Yes 29 0.96 Yes -25 0.7 Yes 45 63.94 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 72560925 - NM_014824 FCHSD2 1 0.95 2.15 59 2.47 0 13 4.36 No 9 1.2 Yes 26 0.46 Yes -36 0.34 No 35 74.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 72611374 - NM_014824 FCHSD2 1 0.06 0.19 13 3.53 84.34 46 9.2 Yes 33 1.45 Yes 35 0.19 Yes -45 0.71 Yes 25 94.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 72643891 - NM_014824 FCHSD2 1 0.31 0.57 27 6.62 82.57 26 6.91 Yes 13 0.92 Yes 0 0 No -25 0.88 Yes 45 92.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72664070 - NM_014824 FCHSD2 1 0.06 0.11 8 7.52 87.27 36 7.09 Yes 60 1.18 Yes 0 0 No -30 0.9 Yes 40 94.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72670005 - NM_014824 FCHSD2 1 0.1 0.18 12 6.99 77.04 25 5.25 No 9 -1.6 No 0 0 No -24 0.82 Yes 46 83.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 72675083 - NM_014824 FCHSD2 1 0.49 0.9 42 8.63 96.71 30 5.83 Yes 74 1.43 Yes 0 0 No -29 0.85 Yes 41 84.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72692489 - NM_014824 FCHSD2 1 0.24 0.43 24 6.63 80.85 32 6.9 Yes 19 0.27 No 0 0 No -32 0.27 No 38 36.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 72694898 - NM_014824 FCHSD2 1 0.79 1.46 50 7.81 81.45 28 3.91 No 48 0.33 No 27 0.79 Yes -27 0.79 Yes 48 62.47 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 72696161 - NM_014824 FCHSD2 1 0.07 0.21 13 -11.97 0 28 5.33 No 48 0.62 No 0 0 No -27 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 72700141 - NM_014824 FCHSD2 1 0.04 0.14 9 -24.39 0 36 5.74 Yes 12 0.57 No 0 0 No -27 0.35 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 72727651 - NM_014824 FCHSD2 1 0.69 1.15 42 -1.92 72.54 31 7.85 Yes 18 0.46 No 0 0 No -30 0.52 No 34 76.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 72747245 - NM_014824 FCHSD2 1 0.49 0.81 33 9.63 77.13 153 11.67 Yes 24 1.21 Yes 0 0 No -36 0.81 Yes 34 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72748100 - NM_014824 FCHSD2 1 0.43 0.74 29 9.04 84.89 26 5.4 No 49 0.62 No 0 0 No -26 0.61 No 45 74.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 72750559 - NM_014824 FCHSD2 1 0.13 0.21 11 2.33 84.41 36 10.56 Yes 23 1.36 Yes 0 0 No -35 0.87 Yes 35 87.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72754285 - NM_014824 FCHSD2 1 0.28 0.44 24 7.15 77.06 32 5.85 Yes 68 -2.88 No 0 0 No -20 0.56 No 50 43.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 72759431 - NM_014824 FCHSD2 1 0.08 0.14 10 7.51 95.32 23 5 No 10 1.51 Yes 0 0 No -22 0.92 Yes 48 96.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 72790542 - NM_014824 FCHSD2 1 0.68 1.14 44 8.07 90.72 17 5.22 No 75 0.55 No 0 0 No -24 0.64 No 46 66.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 72793373 - NM_014824 FCHSD2 1 0.89 1.47 43 1.4 70.8 52 8.18 Yes 39 1.64 Yes 0 0 No -51 0.55 No 19 61.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 72839588 - NM_014824 FCHSD2 1 0.15 0.4 25 11.41 95.88 74 9.6 Yes 61 1.48 Yes 0 0 No -37 0.41 No 33 69.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 72847565 - NM_014824 FCHSD2 1 0.06 0.15 10 2.71 84.79 15 4.7 No 2 1.51 Yes 0 0 No -24 0.68 Yes 46 46.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 72850429 - NM_014824 FCHSD2 1 0.09 0.26 12 4.65 81.03 41 5.01 No 38 0.74 No 0 0 No -22 0.88 Yes 48 79.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 72852120 - NM_014824 FCHSD2 1 0.07 0.14 8 10.32 92.26 32 6.16 Yes 63 0.13 No 0 0 No -31 0.63 No 46 60.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 72852446 - NM_014824 FCHSD2 1 0.1 0.21 11 3.74 74.76 25 6.93 Yes 75 0.66 No 0 0 No -25 0.65 No 45 55.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207080607 - NM_001142473 FCMR 1 0.28 0.57 28 5.4 73.12 32 6.86 Yes 19 2.45 Yes 0 0 No -31 0.86 Yes 39 93.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 207082860 - NM_001142473 FCMR 1 0.45 0.89 40 -0.98 0 9 3.87 No 17 1.82 Yes 0 0 No -29 0.97 Yes 41 94.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 207083204 - NM_001142473 FCMR 1 1.08 3.53 64 -1.81 0 14 3.67 No 38 1.96 Yes 0 0 No -50 0.88 Yes 20 86.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 207083204 - NM_001142473 FCMR 1 0.19 0.63 30 -1.81 0 14 3.67 No 38 1.96 Yes 0 0 No -50 0.88 Yes 20 86.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 207083684 - NM_001142473 FCMR 1 0.06 0.18 12 -0.25 71.82 41 7.65 Yes 28 1.55 Yes 0 0 No -40 0.43 No 27 69.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 207085157 - NM_001142473 FCMR 1 0.22 0.96 45 7.35 77.34 34 6.08 Yes 64 0.64 No 0 0 No -31 0.49 No 37 41.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207086314 - NM_001142473 FCMR 1 0.15 0.15 10 9.43 89.4 39 5.12 No 8 0.43 No 0 0 No -20 0.81 Yes 50 69.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 207087440 - NM_001142473 FCMR 1 385.74 336.83 72 10.85 85.92 18 6.78 Yes 5 1.21 Yes 21 0.37 Yes -21 0.9 Yes 49 92.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 207088441 - NM_001142473 FCMR 1 0.85 0.79 36 3.01 64.49 29 6.29 Yes 67 0.23 No 0 0 No -32 0.6 No 38 59.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 207094251 - NM_001142473 FCMR 1 0.22 0.21 12 7.95 83.45 33 6.97 Yes 20 1.09 Yes 0 0 No -32 0.8 Yes 38 82.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 207094779 - NM_001142473 FCMR 1 2.76 2.5 61 6.27 86.44 20 5.57 Yes 7 1.07 Yes 19 0.72 Yes -19 0.7 Yes 51 86.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 157490352 - NM_001195388 FCRL5 1 10.74 4.56 64 5.79 78.83 28 5.65 Yes 72 1.37 Yes 27 0.56 Yes -25 0.72 Yes 45 74.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 157490430 - NM_001195388 FCRL5 1 0.81 0.31 18 4.36 74.76 26 5.66 Yes 56 0.23 No 0 0 No -25 0.93 Yes 45 80.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 157494150 - NM_001195388 FCRL5 1 0.32 0.4 20 7.36 86.73 20 6.01 Yes 7 0.5 No 0 0 No -19 0.81 Yes 51 79.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 157500320 - NM_001195388 FCRL5 1 0.13 0.13 9 -3.18 48.07 39 6.4 Yes 26 1.06 Yes 0 0 No -38 0.64 No 32 49.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 157504138 - NM_001195388 FCRL5 1 15.62 12.15 72 8.3 77.9 47 7 Yes 9 0.93 Yes 0 0 No -37 0.84 Yes 33 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 157511543 - NM_001195388 FCRL5 1 0.16 0.26 16 8.96 80.69 21 7 Yes 8 2.35 Yes 0 0 No -20 0.67 Yes 50 66.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 157512813 - NM_001195388 FCRL5 1 4.34 5.72 62 8.01 84.86 29 5.57 Yes 35 1.1 Yes 0 0 No -22 0.42 No 48 38.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 157512835 - NM_001195388 FCRL5 1 0.27 0.38 15 -5.19 0 26 6.08 Yes 58 1.41 Yes 0 0 No -25 0.78 Yes 45 69.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 157513800 - NM_001195388 FCRL5 1 1.13 1.56 32 12.31 95.46 52 7.58 Yes 39 1.31 Yes 0 0 No -27 0.62 No 39 34.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 157514335 - NM_001195388 FCRL5 1 0.08 0.19 11 -1.83 78.82 17 6.8 Yes 4 0.87 Yes 0 0 No -36 0.74 Yes 34 73.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 157514834 - NM_001195388 FCRL5 1 0.32 0.47 26 6.97 85.54 18 4.93 No 19 1.35 Yes 0 0 No -24 0.74 Yes 46 58.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 157516071 - NM_001195388 FCRL5 1 6.87 10.07 71 4.43 86.43 20 6.84 Yes 7 1.16 Yes 19 0.72 Yes -30 0.78 Yes 40 84.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 157516071 - NM_001195388 FCRL5 1 0.6 0.99 39 4.43 86.43 20 6.84 Yes 7 1.16 Yes 19 0.72 Yes -30 0.78 Yes 40 84.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 157516074 - NM_001195388 FCRL5 1 0.15 0.19 12 2.36 82.94 17 6.62 Yes 4 1.19 Yes 19 0.72 Yes -27 0.86 Yes 43 91.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 157516956 - NM_001195388 FCRL5 1 1.46 3 62 6.05 91.47 13 4.76 No 46 0.75 No 0 0 No -58 0.47 No 49 62.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 157517566 - NM_001195388 FCRL5 1 0.42 0.65 29 6 74.46 37 4.62 No 74 1.13 Yes 0 0 No -24 0.9 Yes 46 66.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 161680229 + NM_001184866 FCRLA 1 0.27 0.11 7 -4.23 72.03 43 7.32 Yes 30 1.95 Yes 29 0.75 Yes -42 0.62 No 28 85.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 161680267 + NM_001184866 FCRLA 1 4.77 2.31 43 5.59 75.71 37 6.86 Yes 68 1.94 Yes 0 0 No -33 0.7 Yes 37 80.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161680334 + NM_001184866 FCRLA 1 12.03 3.11 64 6.93 75.13 44 6.17 Yes 31 1.34 Yes 0 0 No -43 0.8 Yes 27 84.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161681015 + NM_001184866 FCRLA 1 0.19 0.96 40 0.96 74.9 11 4.55 No 33 1.41 Yes 0 0 No -45 0.52 No 25 91.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 161681142 + NM_001184866 FCRLA 1 0.08 0.26 15 5 76.41 28 5.83 Yes 44 1.51 Yes 0 0 No -27 0.87 Yes 43 82.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 11677587 + NM_001287751 FDFT1 1 0.03 0.19 10 6.34 79.19 23 6.6 Yes 10 1.18 Yes 0 0 No -22 0.71 Yes 48 69.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 11683508 + NM_001287751 FDFT1 1 0.02 0.17 7 1.75 75.09 19 5.38 No 68 1.31 Yes 22 0.69 Yes -22 0.7 Yes 48 80.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 11683587 + NM_001287751 FDFT1 1 0.16 1.1 44 8.81 84.56 60 8 Yes 74 -1.51 No 26 0.52 Yes -26 0.64 No 44 60.02 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 11692792 + NM_001287751 FDFT1 1 0.13 0.79 36 10.43 89.03 31 5.46 No 62 1.26 Yes 0 0 No -23 0.63 No 47 69.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 155279854 + NM_001135821 FDPS 1 33.68 24.21 72 8.93 84.64 24 5.29 No 30 1.97 Yes 23 0.94 Yes -23 0.73 Yes 47 82.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155279854 + NM_001135821 FDPS 1 4.61 3.46 66 8.93 84.64 24 5.29 No 30 1.97 Yes 23 0.94 Yes -23 0.73 Yes 47 82.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155280122 + NM_001135821 FDPS 1 0.06 0.25 12 1.32 84.41 28 5.29 No 24 0.17 No 31 0.49 Yes -25 0.54 No 43 68.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 155280126 + NM_001135821 FDPS 1 0.2 0.86 37 3.37 0 32 5.66 Yes 28 0.16 No 31 0.49 Yes -29 0.55 No 39 69.15 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 155288702 + NM_001135821 FDPS 1 0.06 0.47 27 10.12 77.16 34 5.43 No 71 0.51 No 0 0 No -21 0.62 No 41 49.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155289405 + NM_001135821 FDPS 1 0.11 0.99 45 4.67 0 23 7.74 Yes 10 1.74 Yes 26 0.41 Yes -26 0.72 Yes 44 80.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155289539 + NM_001135821 FDPS 1 0.03 0.25 15 8.72 87.05 18 5.48 No 5 0.93 Yes 0 0 No -23 0.74 Yes 47 64.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 110306562 + NM_004109 FDX1 1 0.41 0.29 15 2.73 0 27 5.66 Yes 14 0.82 Yes 0 0 No -26 0.77 Yes 44 84.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 110307744 + NM_004109 FDX1 1 0.4 0.61 29 2.22 0 40 5.58 Yes 17 0.9 Yes 0 0 No -29 0.55 No 41 57.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 110315497 + NM_004109 FDX1 1 0.09 0.14 8 7.02 82.95 30 12.09 Yes NA NA NA 0 0 No -28 0.47 No 42 56.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 110329784 + NM_004109 FDX1 1 0.31 0.57 28 5.4 78.11 46 6.7 Yes 76 1.04 Yes 0 0 No -27 0.92 Yes 43 86.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10421282 - NM_001031734 FDX1L 1 6.12 4.33 69 9.22 86.13 30 5.38 No 49 1.1 Yes 0 0 No -20 0.63 No 50 73.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 10426230 - NM_001031734 FDX1L 1 3.52 1.89 58 8.47 76.12 23 5.41 No 10 0.71 No 0 0 No -29 0.53 No 48 70.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 111746708 - NR_038364 FDXACB1 1 1.02 0.36 20 8.56 90.92 28 5.74 Yes 15 0.92 Yes 0 0 No -27 0.73 Yes 43 82.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 72860468 - NM_001258014 FDXR 1 0.13 0.51 25 -9.22 70.01 16 5.57 Yes 69 -5.8 No 22 0.39 Yes -22 0.54 No 46 40.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72860468 - NM_001258014 FDXR 1 0.27 1.01 41 -9.22 70.01 16 5.57 Yes 69 -5.8 No 22 0.39 Yes -22 0.54 No 46 40.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72860684 - NM_001258014 FDXR 1 0.05 0.24 11 -13 62.59 38 8.19 Yes 25 2.53 Yes 0 0 No -37 0.86 Yes 33 87.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 72861052 - NM_001258014 FDXR 1 0.26 1.15 42 -3.16 77.7 29 5.39 No 16 0.75 No 0 0 No -23 0.81 Yes 47 66.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 72861072 - NM_001258014 FDXR 1 1.42 7.08 64 0.94 70.71 20 4.65 No -4 0.45 No 19 0.49 Yes -39 0.31 No 27 38.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72861089 - NM_001258014 FDXR 1 0.01 0.11 7 5.99 83.78 28 5.2 No 56 0.41 No 19 0.49 Yes -26 0.35 No 44 45.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72861138 - NM_001258014 FDXR 1 0.05 0.25 12 0.45 0 20 4.36 No 7 0.45 No 0 0 No -19 0.9 Yes 51 71.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 72861375 - NM_001258014 FDXR 1 0.05 0.21 13 6.89 85.31 24 5.04 No 11 0.28 No 0 0 No -23 0.88 Yes 47 88.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 72861511 - NM_001258014 FDXR 1 0.04 0.15 8 11.01 90.62 31 5.87 Yes 53 1.81 Yes 0 0 No -30 0.58 No 40 59.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 72861610 - NM_001258014 FDXR 1 0.04 0.15 11 7.74 87.01 27 5.74 Yes 60 1.07 Yes 0 0 No -26 0.8 Yes 44 93.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 72861898 - NM_001258014 FDXR 1 0.14 0.32 16 2.68 78.92 24 5.1 No 18 -1.28 No 0 0 No -23 0.75 Yes 47 88.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 72861958 - NM_001258014 FDXR 1 0.15 0.18 8 -3.31 60.74 22 5.29 No 44 -3.8 No 21 0.83 Yes -30 0.51 No 42 37.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72863002 - NM_001258014 FDXR 1 22.5 92.38 72 3.87 79.78 25 5.19 No NA NA NA 24 0.78 Yes -21 0.63 No 50 67.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72863021 - NM_001258014 FDXR 1 0.09 0.32 19 6.26 74.91 26 5.66 Yes 59 1.3 Yes 25 0.75 Yes -25 0.63 No 45 72.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 72863128 - NM_001258014 FDXR 1 0.58 2.71 57 10.21 94.41 21 5.19 No 8 0.61 No 20 0.71 Yes -20 0.81 Yes 50 74.93 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 72866226 - NM_001258014 FDXR 1 0.39 1.53 48 9.29 91.92 27 5.09 No 2 1.36 Yes 26 0.9 Yes -26 0.91 Yes 44 90.23 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 72868233 - NM_001258014 FDXR 1 1.37 3.42 55 7.52 91.98 18 5.39 No 44 1.66 Yes 28 0.52 Yes -56 0.65 No 53 32.54 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 72868427 - NM_001258014 FDXR 1 0.09 0.18 12 3.15 76.89 25 4.86 No 30 -2.76 No 0 0 No -23 0.5 No 47 72.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 72868442 - NM_001258014 FDXR 1 0.63 1.06 38 2.44 66.07 35 5.06 No 64 -4.76 No 27 0.78 Yes -25 0.61 No 45 56.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 55235109 - NM_001012515 FECH 1 0.25 0.19 12 9.32 91.29 33 5.87 Yes 26 0.78 Yes 22 0.7 Yes -32 0.51 No 42 52.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 55238836 - NM_001012515 FECH 1 0.61 0.54 28 4.97 80.54 33 7 Yes 65 1.26 Yes 32 0.76 Yes -32 0.72 Yes 38 76.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 55253206 - NM_001012515 FECH 1 0.31 0.14 9 3.57 60.03 18 4.78 No 5 0.38 No 26 0.51 Yes -17 0.57 No 53 31.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 68571282 + NM_015322 FEM1B 1 0.61 0.47 25 6.61 80.56 21 5 No 53 1.16 Yes 0 0 No -20 0.88 Yes 50 93.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 68576243 + NM_015322 FEM1B 1 0.45 0.32 19 4.74 84.41 29 5.96 Yes 16 1.36 Yes 0 0 No -28 0.91 Yes 42 96.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 68577175 + NM_015322 FEM1B 1 0.23 0.18 12 7.25 80.32 16 4.3 No 29 0.12 No 0 0 No -37 0.59 No 41 67.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 114865276 - NM_020177 FEM1C 1 1.66 1.1 42 7.59 87.33 44 7.53 Yes 10 1.36 Yes 0 0 No -43 0.7 Yes 27 78.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 114875572 - NM_020177 FEM1C 1 0.39 0.25 15 8.5 93.92 26 7.59 Yes 13 1.41 Yes 0 0 No -26 0.64 No 44 60.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 61562977 + NM_004111 FEN1 1 0.05 0.13 9 5.22 87.36 16 4.8 No 32 1.35 Yes 0 0 No -26 0.84 Yes 47 69.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61564393 + NM_004111 FEN1 1 0.09 0.22 13 9.07 87.25 27 5.74 Yes 62 0.26 No 26 0.68 Yes -24 0.65 No 46 64.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 108118363 + NM_005246 FER 1 0.85 0.19 12 5.7 86.29 32 6.38 Yes 33 0.9 Yes 31 0.45 Yes -31 0.57 No 39 66.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 108134024 + NM_005246 FER 1 1.1 0.29 17 5.87 87.47 27 5.17 No 64 -3.25 No 0 0 No -26 0.75 Yes 44 89.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 108118363 + NM_005246 FER 1 8.23 2.01 61 5.7 86.29 32 6.38 Yes 33 0.9 Yes 31 0.45 Yes -31 0.57 No 39 66.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 108134024 + NM_005246 FER 1 2.4 0.6 24 5.87 87.47 27 5.17 No 64 -3.25 No 0 0 No -26 0.75 Yes 44 89.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 108151027 + NM_005246 FER 1 0.55 0.29 19 6.27 81.84 68 5.17 No 76 -2.58 No 0 0 No -27 0.66 No 44 54.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 108155851 + NM_005246 FER 1 0.46 0.26 14 8.34 71.01 38 6.23 Yes 25 1.38 Yes 0 0 No -37 0.55 No 33 64.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 108156050 + NM_005246 FER 1 0.45 0.28 16 3.03 83.35 34 6.03 Yes -1 0.29 No 0 0 No -19 0.49 No 47 59.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 108177531 + NM_005246 FER 1 0.28 0.11 7 9.01 81.66 35 6.4 Yes 22 1.4 Yes 34 0.75 Yes -34 0.95 Yes 36 97.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 108179252 + NM_005246 FER 1 0.93 0.43 25 8.81 83.21 33 4.89 No 13 0.53 No 0 0 No -32 0.57 No 45 60.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 108183610 + NM_005246 FER 1 0.19 0.11 7 8.76 97.5 59 6.14 Yes 46 0.25 No 0 0 No -28 0.68 Yes 47 45.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 108198845 + NM_005246 FER 1 1.54 0.78 35 8.71 88.34 26 6.48 Yes 13 2.57 Yes 0 0 No -25 0.86 Yes 45 90.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 108214058 + NM_005246 FER 1 0.32 0.17 10 7.25 82.92 47 8.36 Yes 34 1.33 Yes 0 0 No -46 0.88 Yes 24 96.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 108233663 + NM_005246 FER 1 6.85 2.28 58 8.83 87.67 29 7.1 Yes 16 0.48 No 0 0 No -29 0.84 Yes 41 86.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 108292503 + NM_005246 FER 1 0.27 0.13 9 10.38 95 22 5.89 Yes 9 0.74 No 0 0 No -21 0.63 No 49 71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 108316325 + NM_005246 FER 1 2.56 0.9 36 6.24 87.98 29 6.39 Yes 16 1.42 Yes 0 0 No -28 0.9 Yes 42 96.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 108359747 + NM_005246 FER 1 0.44 0.15 9 12.21 94.39 16 5.75 Yes 68 1.76 Yes 0 0 No -28 0.62 No 37 71.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 108360202 + NM_005246 FER 1 1.07 0.38 20 5.32 83.85 28 5.29 No 15 0.75 No 0 0 No -27 0.97 Yes 43 97.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 108472840 + NM_005246 FER 1 2.93 0.76 29 6.78 78.22 45 4.78 No 6 0.81 Yes 0 0 No -27 0.46 No 44 46.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 63974577 + NM_178443 FERMT3 1 0.05 0.14 8 5.41 75.29 28 4.49 No 15 0.87 Yes 0 0 No -27 0.76 Yes 43 82.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63974825 + NM_178443 FERMT3 1 10.78 28.03 72 2.82 78.67 32 6.55 Yes 64 -0.12 No 28 0.79 Yes -31 0.57 No 39 72.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 63978061 + NM_178443 FERMT3 1 0.1 0.38 21 -6.93 0 15 2.86 No 42 -2.56 No 27 0.58 Yes -54 0.48 No 16 50.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 63979047 + NM_178443 FERMT3 1 0.11 0.36 19 10.1 84.28 34 6.32 Yes NA NA NA 0 0 No -33 0.6 No 37 80.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 63979399 + NM_178443 FERMT3 1 0.12 0.42 21 2.76 82.46 95 9.32 Yes 9 1.26 Yes 0 0 No -21 0.61 No 49 48.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 63981685 + NM_178443 FERMT3 1 0.05 0.19 11 5.72 90.92 22 4.42 No 39 0.95 Yes 0 0 No -54 0.5 No 16 82.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 63986701 + NM_178443 FERMT3 1 0.44 1.63 54 -6.5 0 15 3.97 No 5 1.56 Yes 23 0.6 Yes -17 0.84 Yes 53 74.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 63986726 + NM_178443 FERMT3 1 0.3 0.99 39 4.47 0 35 5.66 Yes 30 1.86 Yes 0 0 No -27 0.76 Yes 43 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63987010 + NM_178443 FERMT3 1 0.06 0.24 14 -4.84 54.22 25 4.9 No 31 1.07 Yes 0 0 No -43 0.63 No 27 62.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 63987216 + NM_178443 FERMT3 1 0.18 0.67 30 -1.46 0 24 7.06 Yes 11 2.08 Yes 18 0.81 Yes -23 0.91 Yes 47 89.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 63987362 + NM_178443 FERMT3 1 4457.18 417.74 72 -2.09 0 21 4.36 No 23 -2.17 No 23 0.88 Yes -23 0.35 No 47 29.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 63987879 + NM_178443 FERMT3 1 0.13 0.43 24 -9.39 0 13 4.24 No 66 -4.92 No 30 0.75 Yes -15 0.44 No 49 41.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 63987910 + NM_178443 FERMT3 1 0.04 0.14 8 -8.96 69.9 19 6.25 Yes 6 1.94 Yes 0 0 No -30 0.72 Yes 40 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63987913 + NM_178443 FERMT3 1 0.17 0.56 28 -5.36 0 9 3.87 No 9 1.93 Yes 0 0 No -33 0.72 Yes 37 82.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63988120 + NM_178443 FERMT3 1 0.14 0.46 24 8.68 80.05 34 6.71 Yes 41 1.93 Yes 0 0 No -26 0.53 No 37 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 125331691 - NM_005103 FEZ1 1 0.47 0.31 13 6.91 80.8 23 5.71 Yes 1 1.37 Yes 0 0 No -22 0.75 Yes 48 62.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 125333494 - NM_005103 FEZ1 1 0.97 0.18 10 3.53 73.91 28 5.47 No 0 0.7 No 33 0.8 Yes -22 0.35 No 38 49.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 125339053 - NM_005103 FEZ1 1 2.09 1 25 2.97 73.72 22 5.1 No 9 0.17 No 21 0.85 Yes -21 0.94 Yes 49 93.34 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 36783204 - NM_001042548 FEZ2 1 0.52 0.17 9 6.61 80.93 25 5.91 Yes 12 1.7 Yes 24 0.86 Yes -24 0.68 Yes 46 69.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 36811967 - NM_001042548 FEZ2 1 0.54 0.18 11 5.64 88.67 25 5 No 12 1.14 Yes 0 0 No -24 0.97 Yes 46 97.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36979455 + NM_173558 FGD2 1 0.24 0.22 15 5.95 82.32 29 7.07 Yes 16 0.87 Yes 20 0.79 Yes -28 0.89 Yes 42 92.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 36980197 + NM_173558 FGD2 1 0.33 0.22 14 7.51 84.42 24 5.58 Yes 8 0.76 No 0 0 No -26 0.49 No 44 53.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36980812 + NM_173558 FGD2 1 0.77 0.56 30 9.01 92.11 13 9.27 Yes 0 -0.62 No 0 0 No -25 0.51 No 45 53.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36981389 + NM_173558 FGD2 1 0.14 0.13 8 1.24 0 33 6.24 Yes 20 0.37 No 0 0 No -32 0.84 Yes 38 85.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 36981742 + NM_173558 FGD2 1 9.64 9.46 71 -1.42 0 59 8.42 Yes 46 2.53 Yes 0 0 No -40 0.64 No 30 89.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 36982166 + NM_173558 FGD2 1 0.23 0.15 9 8.81 82 38 6.07 Yes 25 0.28 No 25 0.68 Yes -25 0.68 Yes 45 67.51 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 36982166 + NM_173558 FGD2 1 0.26 0.25 17 8.81 82 38 6.07 Yes 25 0.28 No 25 0.68 Yes -25 0.68 Yes 45 67.51 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 36982356 + NM_173558 FGD2 1 0.51 0.43 22 5.21 76.9 24 5.48 No 11 0.47 No 23 0.92 Yes -23 0.91 Yes 47 89.06 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 36982424 + NM_173558 FGD2 1 0.37 0.39 19 1.46 68.64 27 6.35 Yes 14 0.75 No 0 0 No -26 0.52 No 44 60.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36982586 + NM_173558 FGD2 1 0.12 0.11 8 8.39 83.56 39 7.83 Yes 3 1.76 Yes 0 0 No -27 0.54 No 43 58.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36983575 + NM_173558 FGD2 1 3.21 2.82 64 6.43 82.58 30 5.5 No 39 1.88 Yes 29 0.72 Yes -26 0.53 No 44 53.95 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 36985292 + NM_173558 FGD2 1 0.43 0.4 20 6.22 75.86 30 7.49 Yes 17 1.67 Yes 0 0 No -29 0.93 Yes 41 91.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36990092 + NM_173558 FGD2 1 0.34 0.28 17 4.88 76.47 22 6 Yes 75 -5.23 No 0 0 No -21 0.91 Yes 49 92.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 36990964 + NM_173558 FGD2 1 0.78 0.94 35 5.78 75.61 23 9.29 Yes 47 2.23 Yes 0 0 No -22 0.93 Yes 48 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36992548 + NM_173558 FGD2 1 1.72 2.13 54 10.01 88.6 27 7.62 Yes 14 2.11 Yes 0 0 No -26 0.95 Yes 44 93.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36992992 + NM_173558 FGD2 1 0.87 0.99 45 6.35 84.37 20 4.79 No 46 0.1 No 0 0 No -20 0.57 No 45 26.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36993866 + NM_173558 FGD2 1 10.81 8.35 72 14.31 85.18 41 7.55 Yes 28 1.4 Yes 0 0 No -40 0.82 Yes 30 91.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36995208 + NM_173558 FGD2 1 0.53 0.4 24 0.44 0 28 5.66 Yes 15 1.86 Yes 0 0 No -27 0.83 Yes 43 95.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36995765 + NM_173558 FGD2 1 0.34 0.33 19 6.73 78.43 30 6.54 Yes 17 1.5 Yes 0 0 No -29 0.96 Yes 41 95.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95794744 + NM_001083536 FGD3 1 0.34 0.13 7 2.94 71.77 24 6.27 Yes -4 0.96 Yes 0 0 No -29 0.38 No 42 42.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 95796825 + NM_001083536 FGD3 1 16.91 4.99 70 1.66 71.81 26 6.63 Yes 13 2.42 Yes 22 0.93 Yes -25 0.92 Yes 45 92.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 38270114 - NM_001174067 FGFR1 1 5.21 1.96 47 8.45 84.52 16 5.83 Yes 3 1.84 Yes 27 0.41 Yes -27 0.41 No 54 63.02 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 38280694 - NM_001174067 FGFR1 1 2.91 1.1 39 6.92 86.26 27 6.93 Yes 14 1.45 Yes 26 0.95 Yes -26 0.9 Yes 44 90.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 167425504 + NM_007045 FGFR1OP 1 0.94 0.19 13 10.41 86.56 28 5.74 Yes 15 1.44 Yes 0 0 No -27 0.89 Yes 43 84.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 167435899 + NM_007045 FGFR1OP 1 11.83 1.71 53 5.82 83.35 40 6.24 Yes 27 1.22 Yes 36 0.24 Yes -39 0.92 Yes 31 96.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 167435899 + NM_007045 FGFR1OP 1 0.8 0.11 8 5.82 83.35 40 6.24 Yes 27 1.22 Yes 36 0.24 Yes -39 0.92 Yes 31 96.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 167438272 + NM_007045 FGFR1OP 1 1.95 2.4 63 -7.2 83.89 25 6.47 Yes 12 1.54 Yes 21 0.88 Yes -24 0.95 Yes 46 93.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 167441354 + NM_007045 FGFR1OP 1 2.7 2.99 64 10.47 81.88 44 6.62 Yes 31 0.61 No 0 0 No -25 0.62 No 33 45.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 167447329 + NM_007045 FGFR1OP 1 0.92 1.07 47 8.49 89.04 25 5.83 Yes 12 0.99 Yes 0 0 No -24 0.71 Yes 46 80.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 167449567 + NM_007045 FGFR1OP 1 0.18 0.18 10 7.56 82.74 13 5.74 Yes 67 1.16 Yes 0 0 No -26 0.7 Yes 46 74.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 167453535 + NM_007045 FGFR1OP 1 3.81 4.38 70 9.76 95.65 27 6.32 Yes 14 2.33 Yes 0 0 No -26 0.95 Yes 44 95.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 167453733 + NM_007045 FGFR1OP 1 0.13 0.15 8 3.59 0 14 4.45 No 1 0.74 No 0 0 No -17 0.49 No 51 64.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27102088 + NM_015633 FGFR1OP2 1 0.28 0.47 21 5.62 83.86 25 5.38 No 22 1.1 Yes 0 0 No -22 0.69 Yes 48 56.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 27102113 + NM_015633 FGFR1OP2 1 0.09 0.14 8 4.99 93.95 28 5.29 No 47 1.09 Yes 0 0 No -27 0.49 No 15 51.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 27106481 + NM_015633 FGFR1OP2 1 0.06 0.11 8 8.88 85.7 28 5.49 No 15 0.79 Yes 27 0.76 Yes -27 0.69 Yes 43 89.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 27107079 + NM_015633 FGFR1OP2 1 0.08 0.13 9 -17.15 0 22 5.58 Yes 27 1.33 Yes 0 0 No -28 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 27107089 + NM_015633 FGFR1OP2 1 0.71 1.21 47 1.47 0 20 4.43 No 37 1.33 Yes 0 0 No -19 0.77 Yes 51 54.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 27113318 + NM_015633 FGFR1OP2 1 0.68 0.63 29 7.73 87.3 24 7.27 Yes 11 1.09 Yes 0 0 No -23 0.81 Yes 47 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27117532 + NM_015633 FGFR1OP2 1 0.26 0.38 20 -4.13 0 35 6.71 Yes 22 1.43 Yes 0 0 No -34 0.73 Yes 36 83.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 59791420 + NM_018291 FGGY 1 2.51 0.53 26 8.84 89.54 13 4.67 No 0 0.36 No 0 0 No -26 0.56 No 44 57.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 59792443 + NM_018291 FGGY 1 1.55 0.24 14 8.19 89.21 28 5.43 No 15 1.61 Yes 0 0 No -27 0.75 Yes 43 83.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 59797514 + NM_018291 FGGY 1 7.76 1.4 56 7.64 79.35 22 4.72 No 61 1.07 Yes 29 0.83 Yes -21 0.56 No 49 58.24 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 59808082 + NM_018291 FGGY 1 0.43 0.17 12 11.42 90.36 52 5.85 Yes 39 0.39 No 0 0 No -42 0.45 No 47 41.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 59810669 + NM_018291 FGGY 1 1.2 0.47 25 12.2 90.91 22 5.62 Yes 35 1.6 Yes 0 0 No -33 0.64 No 37 62.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 59876960 + NM_018291 FGGY 1 0.97 0.17 9 6.51 91.84 26 7.89 Yes 30 1.54 Yes 0 0 No -25 0.79 Yes 45 82.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 59907222 + NM_018291 FGGY 1 0.82 0.14 10 8.98 91.89 31 6.31 Yes 18 0.2 No 0 0 No -35 0.54 No 35 43.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 59923670 + NM_018291 FGGY 1 0.94 0.17 9 7.71 85.27 27 5.29 No 24 -1.53 No 0 0 No -26 0.87 Yes 44 95.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 59939773 + NM_018291 FGGY 1 2.18 0.4 21 7.94 75.84 43 7.36 Yes 30 0.57 No 0 0 No -31 0.52 No 28 78.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 60075763 + NM_018291 FGGY 1 1.24 0.18 11 9.22 91.82 19 5.04 No 11 0.37 No 0 0 No -27 0.86 Yes 43 90.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 60106951 + NM_018291 FGGY 1 5.71 0.92 40 6.12 79.88 30 5.57 Yes 57 1.23 Yes 29 0.28 Yes -29 0.52 No 40 40.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 27941151 - NM_005248 FGR 1 0.19 0.31 17 9.27 78.1 26 6.34 Yes 42 0.96 Yes 0 0 No -25 0.75 Yes 45 70.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27941434 - NM_005248 FGR 1 6.39 7.63 63 3.26 0 25 6.78 Yes 12 2.27 Yes 0 0 No -24 0.83 Yes 46 89.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27942060 - NM_005248 FGR 1 0.08 0.13 8 4.81 76.94 25 5.48 No 73 -4.22 No 0 0 No -24 0.75 Yes 54 44.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 27942354 - NM_005248 FGR 1 0.13 0.24 15 -1.67 76.31 29 6.5 Yes 16 1.46 Yes 0 0 No -28 0.85 Yes 42 85.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27945685 - NM_005248 FGR 1 1.67 2.25 58 0.35 64.78 25 5.06 No 43 0.42 No 0 0 No -24 0.65 No 46 66.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 27949582 - NM_005248 FGR 1 0.56 0.53 29 3.29 75.67 18 4.98 No 51 1.65 Yes 0 0 No -23 0.89 Yes 47 71.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27949786 - NM_005248 FGR 1 0.2 0.17 11 1.35 73.67 23 4.6 No 43 0.05 No 0 0 No -26 0.45 No 44 39.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 27950118 - NM_005248 FGR 1 0.1 0.13 9 5.35 72.69 14 5.2 No 74 -5.04 No 0 0 No -18 0.38 No 52 35.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 27950438 - NM_005248 FGR 1 3.46 4.15 63 5.69 85.43 24 4.79 No 15 0.04 No 0 0 No -23 0.74 Yes 47 72.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 27951503 - NM_005248 FGR 1 0.13 0.11 7 6.04 77.55 22 5.1 No 9 1.14 Yes 0 0 No -21 0.86 Yes 49 94.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27951520 - NM_005248 FGR 1 0.17 0.17 11 2.39 76.1 21 6.22 Yes 72 -4.91 No 0 0 No -20 0.67 Yes 50 66.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 241661529 - NM_000143 FH 1 0.07 0.35 18 2.99 57.55 34 8.37 Yes 21 0.63 No 0 0 No -34 0.79 Yes 36 80.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 241663833 - NM_000143 FH 1 0.04 0.11 8 8.02 0 15 4.58 No 26 0.21 No 0 0 No -14 0.4 No 56 50.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 241665874 - NM_000143 FH 1 0.03 0.15 10 -2.22 0 25 4.7 No 36 0.9 Yes 27 0.8 Yes -24 0.62 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 241672061 - NM_000143 FH 1 0.05 0.25 15 5.77 87.38 16 5.43 No 52 0.98 Yes 0 0 No -20 0.59 No 50 63.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 241682389 - NM_000143 FH 1 0.04 0.1 7 2.91 83.97 23 6.32 Yes 10 0.82 Yes 0 0 No -22 0.68 Yes 48 80.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 59969472 - NM_001320900 FHIT 1 2.72 0.29 13 7.72 79.83 36 7.73 Yes 23 1.36 Yes 0 0 No -35 0.77 Yes 35 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 60874171 - NM_001320900 FHIT 1 2.85 1.15 38 8.39 87 25 6.19 Yes 12 1.1 Yes 0 0 No -28 0.34 No 42 26.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 60899641 - NM_001320900 FHIT 1 0.32 0.11 8 5.4 73.95 57 7.58 Yes 24 1.28 Yes 0 0 No -36 0.82 Yes 34 90 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 60921356 - NM_001320900 FHIT 1 0.34 0.14 10 2.71 69.86 27 4.41 No 25 1.33 Yes 0 0 No -31 0.7 Yes 39 89.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 60936107 - NM_001320900 FHIT 1 0.74 0.28 13 8.75 87.19 17 6.07 Yes 4 0.58 No 0 0 No -33 0.48 No 40 67.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 60943240 - NM_001320900 FHIT 1 3.24 1.26 40 5.34 93.11 23 6.4 Yes 70 0.57 No 0 0 No -22 0.75 Yes 48 83.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 60952928 - NM_001320900 FHIT 1 0.94 0.38 22 10.03 92.34 26 5.48 No 13 0.69 No 0 0 No -26 0.63 No 45 90.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 60964977 - NM_001320900 FHIT 1 0.58 0.19 9 7.3 81.77 30 5.23 No 45 1.84 Yes 0 0 No -29 0.87 Yes 41 88.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 61006193 - NM_001320900 FHIT 1 1.55 0.53 24 9.77 81.03 23 5.39 No 54 0.95 Yes 0 0 No -25 0.61 No 45 58.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 61006228 - NM_001320900 FHIT 1 0.29 0.11 7 6.53 91.19 32 5.88 Yes 19 0.94 Yes 0 0 No -31 0.87 Yes 39 81.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 61027045 - NM_001320900 FHIT 1 0.66 0.25 11 9.64 88.27 20 5.92 Yes 7 0.68 No 0 0 No -20 0.45 No 42 60.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67263858 - NM_001318202 FHOD1 1 0.37 0.25 15 6.19 73.14 14 4.86 No 48 1.88 Yes 0 0 No -22 0.36 No 48 61.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67264128 - NM_001318202 FHOD1 1 0.36 0.17 12 5.16 0 24 5.92 Yes 49 1.96 Yes 18 0.55 Yes -23 0.94 Yes 47 91.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67264370 - NM_001318202 FHOD1 1 0.25 0.17 12 6.49 82.16 36 6.14 Yes 38 1.77 Yes 0 0 No -35 0.54 No 35 80.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 67265159 - NM_001318202 FHOD1 1 0.55 0.29 18 7.59 76.44 27 6.07 Yes 14 0.43 No 0 0 No -26 0.77 Yes 44 62.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 67265248 - NM_001318202 FHOD1 1 0.92 0.53 26 -2.56 0 23 5 No 70 -5.11 No 0 0 No -22 0.93 Yes 48 84.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67265274 - NM_001318202 FHOD1 1 0.27 0.15 10 -9.46 0 12 3.87 No 59 -3.99 No 23 0.52 Yes -11 0.51 No 59 35.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67265720 - NM_001318202 FHOD1 1 1.21 1.04 41 -1.23 67.31 25 5.45 No 58 -5.09 No 0 0 No -24 0.75 Yes 59 46.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 67265742 - NM_001318202 FHOD1 1 0.46 0.38 23 -4.04 66.66 16 4.69 No 36 -3.71 No 19 0.68 Yes -19 0.6 No 51 68.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67265804 - NM_001318202 FHOD1 1 0.12 0.11 8 5.31 65.94 22 5.29 No NA NA NA 21 0.39 Yes -19 0.73 Yes 51 74.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67266415 - NM_001318202 FHOD1 1 0.14 0.13 7 3.01 0 35 6.4 Yes 22 1.43 Yes 0 0 No -34 0.93 Yes 36 95.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67267766 - NM_001318202 FHOD1 1 0.17 0.11 8 10.23 85.62 59 6.81 Yes 46 -0.14 No 0 0 No -28 0.61 No 41 34.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67272174 - NM_001318202 FHOD1 1 0.57 0.29 17 5.28 83.33 16 6 Yes 47 1.34 Yes 27 0.27 Yes -19 0.51 No 48 42.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 67275488 - NM_001318202 FHOD1 1 0.38 0.15 9 7.25 83.24 12 5.1 No 66 2.22 Yes 0 0 No -19 0.5 No 51 65.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 34112548 + NM_001281739 FHOD3 1 0.44 0.29 12 5.78 91.19 29 5.92 Yes 16 1.28 Yes 0 0 No -28 0.85 Yes 42 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 34139260 + NM_001281739 FHOD3 1 0.97 0.1 7 7.42 89.76 24 5.19 No 18 0.71 No 0 0 No -23 0.87 Yes 47 88.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65652160 - NM_004214 FIBP 1 0.64 1.58 54 3.65 72.02 22 5.26 No 70 -0.68 No 19 0.72 Yes -21 0.92 Yes 49 95.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65652608 - NM_004214 FIBP 1 0.18 0.46 27 -0.55 0 20 4.58 No 69 0.65 No 19 0.93 Yes -19 0.94 Yes 51 83.13 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65653293 - NM_004214 FIBP 1 0.05 0.18 8 5.99 88.02 31 5.44 No 56 1.48 Yes 24 0.91 Yes -24 0.69 Yes 46 69.2 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 65653610 - NM_004214 FIBP 1 0.03 0.1 7 5.41 90.92 28 5.01 No 63 1.07 Yes 27 0.55 Yes -54 0.39 No 16 43.99 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 65653867 - NM_004214 FIBP 1 0.06 0.15 9 3.62 66.87 24 5.96 Yes 49 2.22 Yes 0 0 No -23 0.6 No 47 45.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 110017032 + NM_014845 FIG4 1 1.09 0.26 14 9.34 86.12 27 5.29 No 31 1.05 Yes 0 0 No -24 0.73 Yes 46 74.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 110056358 + NM_014845 FIG4 1 0.29 0.17 11 3.42 0 9 3.87 No 24 0.89 Yes 0 0 No -30 0.88 Yes 40 81.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 110059312 + NM_014845 FIG4 1 0.56 0.14 9 8.87 90.56 30 5.37 No 71 1.54 Yes 0 0 No -29 0.32 No 41 67.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 110106873 + NM_014845 FIG4 1 0.44 0.13 7 3.59 76.65 19 5.03 No 30 1.99 Yes 27 0.9 Yes -27 0.55 No 43 55.7 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 110110000 + NM_014845 FIG4 1 1.61 0.46 23 1.08 69.6 34 5.77 Yes 21 0.16 No 0 0 No -33 0.52 No 37 61.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 54255978 + NM_030917 FIP1L1 1 0.09 0.21 14 -14.3 79.23 36 6.93 Yes 23 0.68 No 0 0 No -35 0.5 No 35 50.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 54262109 + NM_030917 FIP1L1 1 0.77 0.49 21 2.79 0 38 7.49 Yes 25 0.93 Yes 0 0 No -27 0.5 No 38 52.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 54265902 + NM_030917 FIP1L1 1 6.79 4.38 71 -0.19 0 9 3.39 No 10 1.69 Yes 0 0 No -25 0.8 Yes 45 85.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54265905 + NM_030917 FIP1L1 1 0.23 0.15 8 -3.15 0 12 4.03 No 13 1.66 Yes 0 0 No -28 0.83 Yes 42 82.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54258383 + NM_030917 FIP1L1 1 0.19 0.13 9 7.51 78.26 32 7.62 Yes 19 1.47 Yes 0 0 No -31 0.93 Yes 39 94.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54262109 + NM_030917 FIP1L1 1 0.46 0.31 15 2.79 0 38 7.49 Yes 25 0.93 Yes 0 0 No -27 0.5 No 38 52.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 54265902 + NM_030917 FIP1L1 1 1.97 1.29 55 -0.19 0 9 3.39 No 10 1.69 Yes 0 0 No -25 0.8 Yes 45 85.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54267873 + NM_030917 FIP1L1 1 0.08 0.15 10 8.46 92.16 30 4.45 No 7 0.77 No 0 0 No -29 0.66 No 41 59.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 54280787 + NM_030917 FIP1L1 1 0.12 0.22 14 -3.71 0 12 3.87 No -1 0.35 No 0 0 No -11 0.7 Yes 43 54.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 54280800 + NM_030917 FIP1L1 1 0.37 0.68 32 0.44 81.74 22 4.69 No 12 0.81 Yes 0 0 No -24 0.92 Yes 46 95.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54281166 + NM_030917 FIP1L1 1 0.12 0.18 13 11.11 95.17 28 6.12 Yes 29 1.2 Yes 0 0 No -31 0.83 Yes 39 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54294263 + NM_030917 FIP1L1 1 0.36 0.61 32 12.99 97.62 34 3.99 No 76 1.03 Yes 0 0 No -28 0.75 Yes 43 52.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 54306748 + NM_030917 FIP1L1 1 45.67 76.57 72 10.85 86.07 23 5.94 Yes 10 0.49 No 22 0.4 Yes -26 0.63 No 42 62.69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 54325474 + NM_030917 FIP1L1 1 0.06 0.11 8 -1.23 0 9 3.87 No 43 1.44 Yes 0 0 No -33 0.39 No 37 58.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 100883534 - NM_016068 FIS1 1 0.04 0.13 7 -5.82 70.57 22 9.11 Yes 9 0.72 No 26 0.81 Yes -21 0.88 Yes 49 81.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 100884464 - NM_016068 FIS1 1 0.23 0.76 36 8.49 94.45 23 4.12 No 10 0.88 Yes 27 0.88 Yes -26 0.82 Yes 44 77.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 100887418 - NM_016068 FIS1 1 0.49 0.9 37 -2.14 61.81 27 6 Yes 34 1.59 Yes 0 0 No -30 0.81 Yes 40 73.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56107101 - NM_032836 FIZ1 1 8.45 2.69 63 5.05 80.9 18 5.61 Yes 46 0.75 No 25 0.67 Yes -25 0.54 No 45 44.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 49316929 - NM_001143782 FKBP11 1 2.66 1.22 32 3.36 84.41 21 6.48 Yes 62 1.2 Yes 20 0.49 Yes -21 0.46 No 50 56.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 49317420 - NM_001143782 FKBP11 1 0.68 0.25 15 7.02 88.29 9 5.57 Yes 23 -1.97 No 28 0.61 Yes -24 0.84 Yes 46 80.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49317632 - NM_001143782 FKBP11 1 0.22 0.67 31 -10.33 0 21 8.02 Yes 8 1.75 Yes 0 0 No -24 0.47 No 46 66.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49317634 - NM_001143782 FKBP11 1 0.5 1.35 46 -8.48 75.97 19 7.9 Yes 6 1.76 Yes 0 0 No -22 0.6 No 48 71.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 49318639 - NM_001143782 FKBP11 1 0.15 0.38 20 9.14 87.43 55 7.35 Yes NA NA NA 0 0 No -37 0.57 No 25 30.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 49318906 - NM_001143782 FKBP11 1 0.29 0.78 35 3.26 70.81 11 5.2 No -2 0.94 Yes 23 0.64 Yes -23 0.61 No 60 31.48 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 49318950 - NM_001143782 FKBP11 1 0.11 0.35 22 3.6 65.83 25 5.57 Yes 66 -4.07 No 24 0.9 Yes -24 0.79 Yes 46 71.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 30058130 - NR_046478 FKBP14 1 2.03 0.26 14 9.5 95.52 35 5.16 No 8 0.52 No 0 0 No -20 0.83 Yes 50 90.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 115932193 - NM_015258 FKBP15 1 0.35 0.24 14 4.88 79.53 25 4.9 No 45 1.72 Yes 0 0 No -24 0.65 No 46 87.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 115934003 - NM_015258 FKBP15 1 0.13 0.11 8 -7.21 0 16 3.87 No 21 2.21 Yes 24 0.6 Yes -33 0.73 Yes 37 63.54 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 115936854 - NM_015258 FKBP15 1 0.93 0.68 31 -2.28 0 13 4.36 No 71 1.55 Yes 0 0 No -33 0.86 Yes 37 90 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115943025 - NM_015258 FKBP15 1 0.31 0.21 11 11.41 99.45 18 5.47 No 5 1.42 Yes 0 0 No -23 0.94 Yes 47 92.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115948634 - NM_015258 FKBP15 1 0.16 0.11 7 1.88 0 13 4.36 No 15 1.77 Yes 0 0 No -27 0.57 No 43 86.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 115948652 - NM_015258 FKBP15 1 0.19 0.13 7 -1.99 71.39 10 3.4 No 68 0.93 Yes 18 0.61 Yes -20 0.66 No 50 39.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 115954230 - NM_015258 FKBP15 1 0.41 0.4 23 11.57 82.17 36 8.3 Yes 23 1.91 Yes 0 0 No -35 0.94 Yes 35 97.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115960549 - NM_015258 FKBP15 1 0.16 0.14 9 8.63 77.66 33 5.5 No 42 2.39 Yes 0 0 No -26 0.65 No 44 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 115965311 - NM_015258 FKBP15 1 0.67 0.46 24 0.21 0 57 10.99 Yes 44 1.65 Yes 0 0 No -56 0.86 Yes 14 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115983168 - NM_015258 FKBP15 1 0.48 0.35 22 3.6 84.22 20 4.79 No 7 1.24 Yes 0 0 No -19 0.79 Yes 51 94.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 1352882 - NM_054014 FKBP1A 1 0.01 0.13 9 -7.58 0 31 6.08 Yes 18 1.18 Yes 0 0 No -30 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 45587353 - NM_002013 FKBP3 1 0.03 0.14 8 0.92 55.24 82 9.18 Yes 69 0.66 No 29 0.43 Yes -26 0.56 No 28 80.26 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 45588213 - NM_002013 FKBP3 1 0.17 0.78 38 2.97 64.19 31 6.72 Yes 46 -3.79 No 0 0 No -30 0.59 No 40 82.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 45588745 - NM_002013 FKBP3 1 0.04 0.14 8 6.26 93.6 28 5.29 No 68 1.3 Yes 0 0 No -27 0.76 Yes 43 69.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 45596634 - NM_002013 FKBP3 1 0.03 0.14 9 6.37 83.64 27 5.83 Yes 76 0.41 No 0 0 No -31 0.69 Yes 39 88.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 45599143 - NM_002013 FKBP3 1 0.03 0.15 11 6.94 80.59 30 5.58 Yes 8 0.88 Yes 23 0.61 Yes -29 0.72 Yes 41 60.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 45602643 - NM_002013 FKBP3 1 0.03 0.13 9 4.72 90.11 27 5.2 No 64 1.26 Yes 26 0.88 Yes -26 0.8 Yes 44 67.49 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 2905430 + NM_002014 FKBP4 1 0.12 0.31 17 7.43 84.15 26 5.39 No 59 0.55 No 25 0.83 Yes -23 0.54 No 53 63.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 2910381 + NM_002014 FKBP4 1 0.03 0.14 8 2.62 74.95 30 7.52 Yes -4 0.27 No 0 0 No -29 0.67 Yes 41 75.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 2911987 + NM_002014 FKBP4 1 0.02 0.11 8 8.69 89.6 15 4.69 No 2 1.78 Yes 0 0 No -20 0.75 Yes 50 78.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35590121 - NM_001145777 FKBP5 1 0.05 0.1 7 6.07 79.44 20 7.07 Yes 7 1.26 Yes 0 0 No -23 0.53 No 51 78.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 35598527 - NM_001145777 FKBP5 1 0.7 1.18 48 7.02 85.12 44 5.86 Yes 31 1.49 Yes 0 0 No -28 0.57 No 47 52.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 35608277 - NM_001145777 FKBP5 1 0.08 0.13 8 3.29 71.76 10 5.12 No -3 0.18 No 0 0 No -25 0.51 No 45 55.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35611126 - NM_001145777 FKBP5 1 1.41 1.14 48 9.67 88.3 27 5.48 No 48 1.56 Yes 0 0 No -29 0.58 No 41 53.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 35614144 - NM_001145777 FKBP5 1 0.73 0.57 31 5.28 75.51 51 7.27 Yes -1 0.15 No 0 0 No -25 0.69 Yes 45 50.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 35614628 - NM_001145777 FKBP5 1 2.12 1.74 53 10.14 88.29 32 5.21 No 54 1.07 Yes 0 0 No -31 0.84 Yes 39 83.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35640537 - NM_001145777 FKBP5 1 1.28 1.1 41 7.76 85.4 24 5.92 Yes 11 1.28 Yes 0 0 No -23 0.92 Yes 47 91.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35646852 - NM_001145777 FKBP5 1 0.36 0.31 19 2.16 0 42 7.75 Yes 29 1.23 Yes 0 0 No -41 0.55 No 29 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 35648200 - NM_001145777 FKBP5 1 1.31 1.08 44 9.52 89.88 39 7.22 Yes 26 0.86 Yes 0 0 No -38 0.91 Yes 32 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35652263 - NM_001145777 FKBP5 1 0.36 0.32 18 6.72 85.4 24 4.98 No 11 0.32 No 0 0 No -23 0.55 No 46 73.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 18643625 - NM_001308373 FKBP8 1 0.84 3.44 68 6.39 78.5 27 4.2 No 33 -1.71 No 26 0.83 Yes -26 0.82 Yes 44 87.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18643685 - NM_001308373 FKBP8 1 0.03 0.14 8 1.81 67.06 22 5.1 No 64 -0.21 No 0 0 No -22 0.65 No 49 65.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18649247 - NM_001308373 FKBP8 1 224.98 343.93 72 3.64 65.26 33 6.24 Yes 65 1.35 Yes 32 0.87 Yes -32 0.81 Yes 38 86.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18649247 - NM_001308373 FKBP8 1 0.14 0.22 14 3.64 65.26 33 6.24 Yes 65 1.35 Yes 32 0.87 Yes -32 0.81 Yes 38 86.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18652782 - NM_001308373 FKBP8 1 0.09 0.13 9 4.76 80.67 20 5.37 No 39 2.38 Yes 26 0.59 Yes -28 0.65 No 19 58.89 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 47250490 + NM_001039885 FKRP 1 2.91 0.15 9 2.8 81.43 20 4.8 No 51 2.14 Yes 19 0.98 Yes -19 0.86 Yes 51 96.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 108333031 + NM_006731 FKTN 1 12.2 0.69 31 8.85 98.51 19 5.39 No 6 1.64 Yes 0 0 No -18 0.56 No 46 63.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 108335935 + NM_006731 FKTN 1 176.83 7.75 72 7.75 93.24 28 6.64 Yes 27 0.05 No 27 0.77 Yes -27 0.91 Yes 43 94.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 108359929 + NM_006731 FKTN 1 0.81 0.39 20 8.89 76.97 59 6.06 Yes 17 1.76 Yes 0 0 No -29 0.77 Yes 41 83.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 108360366 + NM_006731 FKTN 1 3.7 1.53 60 4.66 81.02 22 5.83 Yes 9 1.53 Yes 21 0.82 Yes -21 0.71 Yes 49 63.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 108360911 + NM_006731 FKTN 1 1.99 0.83 39 1.58 69.8 23 4.98 No 56 -4.39 No 0 0 No -22 0.62 No 48 79.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 108363583 + NM_006731 FKTN 1 0.25 0.11 7 2.97 78.51 25 5.06 No 28 1.01 Yes 0 0 No -27 0.9 Yes 43 88.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 108365975 + NM_006731 FKTN 1 0.36 0.11 8 1.75 84.41 31 5.74 Yes 62 1.48 Yes 34 0.62 Yes -30 0.9 Yes 40 94.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 108365979 + NM_006731 FKTN 1 3.38 0.96 44 3.42 0 35 6.08 Yes 66 1.47 Yes 34 0.62 Yes -34 0.91 Yes 36 93.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 108366144 + NM_006731 FKTN 1 0.73 0.21 13 7.41 86.16 25 5.72 Yes 74 0.7 No 0 0 No -25 0.63 No 45 56.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 108377561 + NM_006731 FKTN 1 4.89 1.38 56 1.6 77.32 24 5.86 Yes 11 1.4 Yes 0 0 No -23 0.52 No 47 56.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 108380329 + NM_006731 FKTN 1 0.65 0.18 11 5.53 73.83 13 5.6 Yes 33 1.16 Yes 0 0 No -27 0.52 No 43 31.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 108382186 + NM_006731 FKTN 1 11.07 2.6 65 9.8 88.71 24 6.14 Yes 61 0.19 No 22 0.8 Yes -23 0.59 No 47 56.47 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 108385330 + NM_006731 FKTN 1 10.65 2.46 67 9.34 91.01 30 8.94 Yes 17 1.42 Yes 0 0 No -29 0.92 Yes 41 92.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154959689 + NM_025207 FLAD1 1 0.27 0.29 17 8.51 86.62 21 7.21 Yes 8 1.65 Yes 0 0 No -20 0.89 Yes 50 93.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154959941 + NM_025207 FLAD1 1 1.37 1.49 52 6.52 87.76 20 5.91 Yes 7 0.35 No 30 0.31 Yes -19 0.53 No 40 69.42 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 154965040 + NM_025207 FLAD1 1 0.3 0.19 13 7.21 75 31 6 Yes 18 0.01 No 30 0.35 Yes -30 0.51 No 41 52.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 154962055 + NM_025207 FLAD1 1 2.96 1.49 52 -0.85 64.12 29 5.39 No 35 1.74 Yes 0 0 No -47 0.81 Yes 23 86.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154965040 + NM_025207 FLAD1 1 1.15 0.94 37 7.21 75 31 6 Yes 18 0.01 No 30 0.35 Yes -30 0.51 No 41 52.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 154965040 + NM_025207 FLAD1 1 3.5 2.74 65 7.21 75 31 6 Yes 18 0.01 No 30 0.35 Yes -30 0.51 No 41 52.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 17124774 - NM_144997 FLCN 1 1.04 0.33 17 10.36 90.65 22 5.29 No 62 -2.9 No 0 0 No -21 0.79 Yes 49 84.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17126585 - NM_144997 FLCN 1 0.23 0.11 8 6.21 85.41 27 5.2 No 18 0.42 No 0 0 No -26 0.74 Yes 44 70.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17127826 - NM_144997 FLCN 1 0.63 0.21 12 3.97 73.69 18 5.48 No 50 0.1 No 23 0.26 Yes -21 0.38 No 49 24.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 17139998 - NM_144997 FLCN 1 1.79 0.51 25 10.98 91.45 32 8.06 Yes 40 0.9 Yes 0 0 No -24 0.49 No 46 50.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 128634545 + NM_001167681 FLI1 1 0.58 0.65 36 4.68 0 19 4.25 No 49 0.84 Yes 18 0.78 Yes -18 0.93 Yes 52 91.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 128639020 + NM_001167681 FLI1 1 0.38 0.49 28 5.04 85.58 22 4.8 No 58 -3.81 No 0 0 No -21 0.4 No 49 61.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 128666529 + NM_001167681 FLI1 1 0.1 0.1 7 2.75 68.16 53 8.11 Yes 40 0.6 No 0 0 No -52 0.53 No 39 68.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 128669382 + NM_001167681 FLI1 1 0.38 0.43 21 7.81 86.56 16 4.76 No -1 1.2 Yes 0 0 No -22 0.45 No 48 71.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 18150400 - NM_001256265 FLII 1 0.6 0.65 34 -7.48 0 17 4.24 No NA NA NA 35 0.32 Yes -13 0.44 No 51 26.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 18151157 - NM_001256265 FLII 1 0.15 0.18 13 -0.13 0 12 3.81 No 17 0.87 Yes 0 0 No -29 0.87 Yes 41 79.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 18152223 - NM_001256265 FLII 1 0.17 0.29 16 3.75 71.73 26 6.55 Yes 13 1.4 Yes 29 0.82 Yes -25 0.92 Yes 45 93.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 18155131 - NM_001256265 FLII 1 130.36 105.46 72 5.07 67.59 30 4.61 No 10 1.06 Yes 22 0.94 Yes -22 0.93 Yes 48 91.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 18155368 - NM_001256265 FLII 1 0.05 0.1 7 7.9 87.92 30 5.99 Yes 17 0.76 No 0 0 No -21 0.48 No 49 60.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153577956 - NM_001456 FLNA 1 0.01 0.11 7 -2.24 0 16 4.47 No 65 -2.44 No 24 0.91 Yes -42 0.25 No 28 29.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153578156 - NM_001456 FLNA 1 0.02 0.14 9 2.13 69.79 15 5.38 No 2 0.48 No 0 0 No -21 0.83 Yes 49 70.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153578227 - NM_001456 FLNA 1 0.03 0.24 13 -5.53 0 12 4.24 No 14 2.18 Yes 0 0 No -26 0.69 Yes 44 74.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153579407 - NM_001456 FLNA 1 0.17 1.36 52 -15.57 69.42 26 6.78 Yes 28 0.6 No 0 0 No -25 0.94 Yes 45 91.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153581277 - NM_001456 FLNA 1 0.03 0.22 13 -1.15 67.88 26 4.9 No 23 0.23 No 27 0.73 Yes -35 0.88 Yes 35 93.43 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153581794 - NM_001456 FLNA 1 0.02 0.19 10 6.96 78.67 30 6.4 Yes 42 1.28 Yes 0 0 No -29 0.8 Yes 41 55.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 153582408 - NM_001456 FLNA 1 0.01 0.11 7 -2.5 0 29 5.18 No 57 -1 No 0 0 No -26 0.66 No 44 61.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153582676 - NM_001456 FLNA 1 0.02 0.14 10 2.74 75.49 18 4.64 No 5 0.68 No 23 0.95 Yes -20 0.62 No 50 37.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153585643 - NM_001456 FLNA 1 95.13 306.83 72 9.87 79.9 35 5.58 Yes 22 2.32 Yes 34 0.89 Yes -39 0.64 No 31 70.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 153587519 - NM_001456 FLNA 1 0.07 0.35 21 -0.19 0 38 6.32 Yes 25 0.92 Yes 0 0 No -37 0.89 Yes 33 92.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153587550 - NM_001456 FLNA 1 0.03 0.17 9 7.8 84.21 17 7 Yes 61 -2.61 No 33 0.9 Yes -33 0.55 No 37 51.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153588296 - NM_001456 FLNA 1 0.08 0.58 30 -7.45 0 10 4 No 47 0.18 No 25 0.69 Yes -59 0.51 No 61 36.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153588710 - NM_001456 FLNA 1 0.3 1.75 52 7.22 77.13 30 8.47 Yes 17 2.4 Yes 0 0 No -29 0.77 Yes 41 90.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153593341 - NM_001456 FLNA 1 0.01 0.1 7 1.03 0 23 5.62 Yes 10 0.65 No 37 0.27 Yes -22 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 153593961 - NM_001456 FLNA 1 0.08 0.44 22 7.48 84.6 28 5.83 Yes 27 0.45 No 0 0 No -29 0.71 Yes 43 79.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153594590 - NM_001456 FLNA 1 0.55 3.49 68 -14.8 61.19 23 5.1 No 71 -5.58 No 0 0 No -22 0.85 Yes 48 78.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153594815 - NM_001456 FLNA 1 0.03 0.31 17 5.57 82.99 22 5.74 Yes 35 1.54 Yes 0 0 No -21 0.5 No 49 63.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153595011 - NM_001456 FLNA 1 0.02 0.11 8 -2.07 0 19 4.8 No 6 1.03 Yes 21 0.97 Yes -18 0.96 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 153595025 - NM_001456 FLNA 1 0.03 0.24 14 -5.14 0 16 4.04 No 18 -1.91 No 21 0.97 Yes -15 0.83 Yes 55 50.79 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 153595252 - NM_001456 FLNA 1 0.03 0.26 13 5.72 76.74 19 5 No 72 -4.96 No 37 0.19 Yes -18 0.6 No 52 46.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153601762 - NM_001456 FLNA 1 2.1 0.36 17 10.3 83.64 23 6.61 Yes 47 -0.94 No 0 0 No -28 0.8 Yes 42 93.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 58020538 + NM_001164319 FLNB 1 0.96 0.21 12 11.87 88.73 21 6.93 Yes 8 1.52 Yes 0 0 No -20 0.78 Yes 50 83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 58073813 + NM_001164319 FLNB 1 0.27 0.15 10 9.16 93.03 23 5.13 No 10 1.12 Yes 0 0 No -22 0.65 No 48 60.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 58085364 + NM_001164319 FLNB 1 0.18 0.1 7 7.21 83.27 117 11.66 Yes 36 2.53 Yes 0 0 No -48 0.87 Yes 22 89.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 58117653 + NM_001164319 FLNB 1 11.73 5.03 70 4.43 81.68 19 4.79 No 6 0.94 Yes 18 0.86 Yes -18 0.78 Yes 52 83.74 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 58127584 + NM_001164319 FLNB 1 143.48 27.11 72 3.57 78.97 23 6.78 Yes 10 1.35 Yes 22 0.84 Yes -22 0.74 Yes 48 66.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 27207907 - NM_004475 FLOT2 1 0.06 0.13 9 -7.35 0 13 4.36 No 44 -4.54 No 32 0.6 Yes -16 0.27 No 58 29.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 27210950 - NM_004475 FLOT2 1 0.06 0.1 7 10.96 91.57 23 6.72 Yes 10 2.48 Yes 0 0 No -26 0.77 Yes 44 84.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27212966 - NM_004475 FLOT2 1 5.91 10.79 71 6.06 80.02 77 10.25 Yes 64 2.28 Yes 30 0.45 Yes -44 0.38 No 40 44.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 28963770 - NM_002019 FLT1 1 1.42 0.18 10 8.42 88.92 51 7.34 Yes -4 1.16 Yes 0 0 No -24 0.73 Yes 46 75.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49978930 + NM_001204503 FLT3LG 1 13.72 2.76 65 -6.7 0 21 4.47 No NA NA NA 0 0 No -21 0.38 No 49 42.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49979018 + NM_001204503 FLT3LG 1 1 0.19 11 5.66 81.89 23 5.39 No 20 0.14 No 0 0 No -26 0.6 No 44 49.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49979153 + NM_001204503 FLT3LG 1 0.56 0.19 12 10.15 90.53 36 5.9 Yes 56 1.55 Yes 0 0 No -35 0.48 No 35 43.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 49979373 + NM_001204503 FLT3LG 1 5.58 1.82 52 9.42 84.64 27 5.57 Yes NA NA NA 0 0 No -26 0.54 No 44 87.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 49982219 + NM_001204503 FLT3LG 1 30.43 4.74 71 10.17 86.13 21 5.74 Yes 65 2.2 Yes 21 0.5 Yes -24 0.51 No 50 54.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 213037049 + NM_014053 FLVCR1 1 0.24 0.17 10 0.36 0 18 3.15 No 34 0.61 No 21 0.9 Yes -20 0.66 No 50 39.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 213037734 + NM_014053 FLVCR1 1 19.19 14.65 72 1.81 80.24 28 5.24 No 70 -3.63 No 27 0.77 Yes -27 0.73 Yes 43 44.83 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 213043395 + NM_014053 FLVCR1 1 3.11 2.39 60 7.57 77.91 27 5.29 No 61 1.04 Yes 26 0.75 Yes -26 0.54 No 43 65.5 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 213049731 + NM_014053 FLVCR1 1 0.28 0.19 12 4.3 84.41 28 5.31 No 54 1.53 Yes 0 0 No -22 0.9 Yes 48 95.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 213061236 + NM_014053 FLVCR1 1 0.63 0.36 20 1.76 0 29 5.74 Yes 16 1.72 Yes 0 0 No -28 0.76 Yes 42 95.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 213061304 + NM_014053 FLVCR1 1 1.06 0.63 29 5.94 64.98 60 7.97 Yes 47 1.34 Yes 0 0 No -26 0.46 No 44 44.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 213064433 + NM_014053 FLVCR1 1 0.37 0.31 16 8.11 86.37 27 6.04 Yes 44 1.06 Yes 0 0 No -26 0.67 Yes 44 59.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2963006 + NM_020912 FLYWCH1 1 3.41 0.96 40 6.99 74.39 34 6.96 Yes 40 0.36 No 33 0.76 Yes -28 0.76 Yes 42 70.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2965408 + NM_020912 FLYWCH1 1 1.48 0.43 18 2.75 79.63 17 5.29 No 4 0.75 No 21 0.53 Yes -16 0.6 No 54 77.8 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 2974859 + NM_020912 FLYWCH1 1 1.87 0.54 30 6.75 80 33 6.24 Yes 69 0.08 No 0 0 No -32 0.91 Yes 38 76.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2978824 + NM_020912 FLYWCH1 1 5.49 1.57 52 10.1 93.67 19 7.2 Yes 6 2.14 Yes 18 0.7 Yes -26 0.53 No 44 68.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 2980410 + NM_020912 FLYWCH1 1 347.98 34.18 72 6.87 81.36 24 5.1 No 11 2.12 Yes 23 0.98 Yes -23 0.87 Yes 47 94.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2983135 + NM_020912 FLYWCH1 1 1.58 0.71 32 1.91 0 28 6.53 Yes 15 0.72 No 21 0.51 Yes -27 0.83 Yes 43 81.56 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2984615 + NM_020912 FLYWCH1 1 2.89 0.54 23 5.26 76.03 26 7.74 Yes 13 2.03 Yes 25 0.96 Yes -25 0.95 Yes 45 95.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2986640 + NM_020912 FLYWCH1 1 1.23 0.38 21 8.49 82.32 33 5.65 Yes -1 0.65 No 25 0.64 Yes -32 0.31 No 42 47.74 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 2948776 + NM_138439 FLYWCH2 1 0.77 0.33 20 8.97 83.98 61 5.59 Yes 42 0.83 Yes 0 0 No -30 0.59 No 40 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 43307992 + NM_005892 FMNL1 1 0.14 0.13 8 6.35 75.71 14 5.57 Yes 37 0.44 No 26 0.86 Yes -49 0.56 No 21 79.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 43309609 + NM_005892 FMNL1 1 0.62 0.6 31 6.4 87.06 19 7.14 Yes 53 -2.88 No 0 0 No -31 0.72 Yes 39 73.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 43312198 + NM_005892 FMNL1 1 3.9 6.38 69 7.7 81.05 31 8.66 Yes 18 1.5 Yes 30 0.9 Yes -30 0.79 Yes 40 88.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 43318452 + NM_005892 FMNL1 1 0.19 0.18 11 1.71 61.78 28 6.71 Yes 15 1.64 Yes 20 0.93 Yes -27 0.84 Yes 43 78.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 43318684 + NM_005892 FMNL1 1 0.12 0.13 9 0.2 64.39 24 6.08 Yes 11 1.02 Yes 0 0 No -23 0.79 Yes 47 82.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 43319228 + NM_005892 FMNL1 1 0.75 0.6 32 6.03 82.87 18 4.9 No 41 1.82 Yes 0 0 No -53 0.42 No 17 39.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 43319231 + NM_005892 FMNL1 1 0.23 0.18 11 -1.04 71.24 21 5.2 No 44 1.81 Yes 0 0 No -56 0.41 No 14 49.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 43319340 + NM_005892 FMNL1 1 0.33 0.26 14 8.99 82.36 25 5.39 No NA NA NA 0 0 No -22 0.53 No 48 70.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 43322985 + NM_005892 FMNL1 1 0.31 0.29 16 -0.35 69.05 18 4.9 No 47 -4.83 No 19 0.61 Yes -17 0.76 Yes 53 49.85 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 43323588 + NM_005892 FMNL1 1 0.6 0.83 34 -0.6 0 11 4.58 No 12 0.12 No 0 0 No -31 0.62 No 60 57.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 50037292 - NM_175736 FMNL3 1 0.09 0.13 9 10.59 92.06 11 5.2 No 53 1.36 Yes 0 0 No -21 0.68 Yes 49 59.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 50039707 - NM_175736 FMNL3 1 0.27 0.43 22 10.93 88.36 22 6.76 Yes 9 1.82 Yes 24 0.96 Yes -21 0.95 Yes 49 93.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50040537 - NM_175736 FMNL3 1 2.21 3.21 68 6.38 75.15 29 6.48 Yes 16 2.13 Yes 28 0.93 Yes -28 0.88 Yes 42 93.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50042255 - NM_175736 FMNL3 1 0.47 0.71 33 10.12 90.7 37 6.24 Yes 59 0.76 No 0 0 No -32 0.64 No 38 79.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 50042881 - NM_175736 FMNL3 1 0.05 0.11 7 5.85 76.47 40 6.14 Yes 63 2 Yes 0 0 No -28 0.83 Yes 42 89.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50045993 - NM_175736 FMNL3 1 0.14 0.31 15 -10.9 66.91 25 6.28 Yes 40 1.14 Yes 0 0 No -25 0.75 Yes 46 69.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 50047655 - NM_175736 FMNL3 1 4.89 9.94 72 1.91 73.08 53 7.46 Yes 40 1.46 Yes 0 0 No -33 0.8 Yes 37 77.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50050566 - NM_175736 FMNL3 1 0.31 0.47 27 8.41 86.69 38 6.63 Yes 25 0.66 No 0 0 No -37 0.67 Yes 33 79.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 50050968 - NM_175736 FMNL3 1 0.61 0.25 16 -1.14 0 9 3.87 No 16 1.17 Yes 0 0 No -28 0.86 Yes 42 86.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50052119 - NM_175736 FMNL3 1 1.03 0.36 21 8.28 92.66 29 6.28 Yes 16 1.87 Yes 0 0 No -28 0.96 Yes 42 96.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50052312 - NM_175736 FMNL3 1 0.94 0.24 14 3.05 74.54 38 7.08 Yes 10 0.21 No 0 0 No -22 0.53 No 33 50.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 50053742 - NM_175736 FMNL3 1 5.88 1.6 53 9.67 88.11 62 7.08 Yes 17 1.51 Yes 0 0 No -29 0.93 Yes 41 94.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50059008 - NM_175736 FMNL3 1 0.15 0.24 13 10.74 93.23 23 5.39 No 76 0.97 Yes 0 0 No -22 0.67 Yes 48 76.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50059689 - NM_175736 FMNL3 1 0.26 0.31 18 -0.55 75.37 46 7.75 Yes 33 1.74 Yes 0 0 No -46 0.67 Yes 24 80.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50063979 - NM_175736 FMNL3 1 0.12 0.13 7 5.55 82.11 26 5.29 No -3 0.36 No 0 0 No -25 0.69 Yes 45 78.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 50094495 - NM_175736 FMNL3 1 0.45 0.46 25 6.4 88.76 33 7.67 Yes 20 0.96 Yes 0 0 No -32 0.9 Yes 38 93.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 146994245 + NM_002024 FMR1 1 1.87 1.04 48 7.83 80.47 33 6.24 Yes 20 0.11 No 0 0 No -32 0.82 Yes 38 88.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 147006436 + NM_002024 FMR1 1 0.28 0.24 14 4.04 79.78 29 4.81 No 33 0.25 No 0 0 No -23 0.3 No 47 55.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 147012391 + NM_002024 FMR1 1 0.33 0.22 11 6.38 79.06 24 5.65 Yes 76 0.22 No 0 0 No -29 0.69 Yes 42 61.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 147014919 + NM_002024 FMR1 1 0.19 0.22 12 5.6 89.83 26 5.38 No 38 0.49 No 25 0.72 Yes -25 0.65 No 45 66.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 147026463 + NM_002024 FMR1 1 1.88 0.69 33 -0.71 67.25 13 3.79 No 75 -6.38 No 21 0.61 Yes -20 0.53 No 50 38.55 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 147026424 + NM_002024 FMR1 1 15.22 6.33 72 4.04 78.05 31 5.44 No 42 0.68 No 24 0.88 Yes -24 0.4 No 46 34.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 147026463 + NM_002024 FMR1 1 23.07 9.32 72 -0.71 67.25 13 3.79 No 75 -6.38 No 21 0.61 Yes -20 0.53 No 50 38.55 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 147029932 + NM_002024 FMR1 1 3.17 1.51 42 5.17 82.57 50 5.03 No 7 1.59 Yes 0 0 No -39 0.46 No 31 50.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 147029935 + NM_002024 FMR1 1 0.47 0.22 14 -0.91 72.88 53 5.17 No 10 1.57 Yes 0 0 No -22 0.44 No 28 54.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 147030207 + NM_002024 FMR1 1 1.62 0.81 36 0.95 0 26 6.61 Yes 4 0.91 Yes 0 0 No -26 0.56 No 45 63.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 147030253 + NM_002024 FMR1 1 60.39 29.43 72 3.02 72.43 30 5.55 No 50 0.87 Yes 24 0.52 Yes -29 0.5 No 38 37.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 80678636 + NR_046408 FN3KRP 1 1.14 0.42 17 8.11 87.68 27 5.17 No -2 1.27 Yes 26 0.82 Yes -24 0.81 Yes 46 89.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80680900 + NR_046408 FN3KRP 1 0.18 0.17 11 -5.74 69.57 39 6.55 Yes -3 0.89 Yes 0 0 No -27 0.57 No 43 69.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80680935 + NR_046408 FN3KRP 1 0.29 0.22 12 5.89 68.23 30 5.27 No 6 0.27 No 0 0 No -29 0.55 No 41 35.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 132653574 - NM_015033 FNBP1 1 0.15 0.79 35 8.66 85.67 23 7.14 Yes 76 0.79 Yes 0 0 No -22 0.65 No 48 71.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 132654367 - NM_015033 FNBP1 1 0.06 0.39 20 -0.55 58.18 33 7.06 Yes 17 1.63 Yes 0 0 No -29 0.38 No 38 66.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 132655518 - NM_015033 FNBP1 1 0.08 0.46 26 -0.5 0 18 4.24 No 31 0.51 No 0 0 No -28 0.45 No 42 70.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 132662384 - NM_015033 FNBP1 1 13.59 109.9 72 0.64 79.11 28 5.83 Yes 46 -0.88 No 30 0.8 Yes -27 0.93 Yes 43 95.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 132665279 - NM_015033 FNBP1 1 0.01 0.17 9 0.78 80.47 31 5.92 Yes 24 1.35 Yes 0 0 No -25 0.53 No 42 73.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 132665305 - NM_015033 FNBP1 1 0.03 0.32 20 0.25 0 11 4.58 No -2 0.81 Yes 28 0.77 Yes -26 0.36 No 44 28.37 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 132686219 - NM_015033 FNBP1 1 40.54 21.94 72 5.15 68.61 29 7.96 Yes 16 1.84 Yes 28 0.94 Yes -28 0.93 Yes 42 93.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 132686276 - NM_015033 FNBP1 1 18.61 10.26 71 4.11 78.41 39 3.96 No 55 1.2 Yes 27 0.9 Yes -27 0.86 Yes 32 71.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 132687046 - NM_015033 FNBP1 1 0.45 0.24 14 9.93 86.8 58 7.75 Yes 45 0.33 No 0 0 No -22 0.72 Yes 48 77.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 132687428 - NM_015033 FNBP1 1 0.02 0.14 8 -1.89 0 17 4.24 No 30 0.86 Yes 0 0 No -42 0.6 No 37 72.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 132689619 - NM_015033 FNBP1 1 0.01 0.1 7 -15.16 0 77 9.35 Yes -1 0.46 No 0 0 No -28 0.67 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 132689620 - NM_015033 FNBP1 1 0.02 0.17 12 -19.18 0 76 9.3 Yes -2 0.51 No 0 0 No -27 0.82 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 132691999 - NM_015033 FNBP1 1 0.03 0.43 18 2.16 67.01 30 5.92 Yes 72 0.42 No 26 0.4 Yes -33 0.62 No 37 76.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 132695236 - NM_015033 FNBP1 1 0.01 0.13 7 5.75 67.79 29 6.47 Yes 16 1.27 Yes 0 0 No -28 0.93 Yes 42 95.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 132707164 - NM_015033 FNBP1 1 0.02 0.19 13 -3.29 0 22 4.7 No 35 0.66 No 0 0 No -22 0.61 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 132715601 - NM_015033 FNBP1 1 0.01 0.15 10 10.19 80.57 22 7.28 Yes 57 1.02 Yes 0 0 No -21 0.58 No 49 58.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 132715742 - NM_015033 FNBP1 1 0.05 0.49 22 4.16 86.51 27 4.9 No 2 0.96 Yes 0 0 No -56 0.47 No 14 70.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 132715760 - NM_015033 FNBP1 1 0.03 0.38 23 -1.44 0 9 3.87 No 55 0.73 No 0 0 No -38 0.72 Yes 32 82.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 132718440 - NM_015033 FNBP1 1 0.35 4 69 5.9 88.1 59 7.72 Yes 46 0.55 No 0 0 No -28 0.6 No 42 46.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 132719742 - NM_015033 FNBP1 1 0.02 0.25 14 -5.87 75.24 24 6.25 Yes 11 0.35 No 0 0 No -26 0.79 Yes 44 85.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 132720832 - NM_015033 FNBP1 1 0.05 0.54 30 -13.08 0 29 5.33 No 16 1 Yes 0 0 No -28 0.9 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 132735127 - NM_015033 FNBP1 1 0.02 0.19 11 5.33 86.86 26 5.16 No 29 0.96 Yes 0 0 No -26 0.88 Yes 44 83.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 132738179 - NM_015033 FNBP1 1 0.07 0.85 39 10.11 85.05 44 6.16 Yes 75 1.36 Yes 0 0 No -43 0.66 No 27 73.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 132740836 - NM_015033 FNBP1 1 0.18 1.75 52 1.97 72.99 43 5.43 No 30 0.34 No 0 0 No -28 0.4 No 23 62.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 132740916 - NM_015033 FNBP1 1 0.02 0.21 9 6.28 74.53 23 5.88 Yes 42 0.51 No 26 0.42 Yes -25 0.5 No 45 52.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 132761339 - NM_015033 FNBP1 1 0.16 0.96 42 8.33 78.67 35 5.2 No 59 1.43 Yes 0 0 No -23 0.82 Yes 47 76.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47741000 - NM_001318339 FNBP4 1 0.18 0.17 12 8.84 83.47 29 5.82 Yes 16 0.53 No 0 0 No -32 0.49 No 41 46.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 47744894 - NM_001318339 FNBP4 1 0.1 0.11 7 6.35 81.26 55 9.34 Yes 42 1.57 Yes 29 0.81 Yes -36 0.61 No 34 48.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 47747389 - NM_001318339 FNBP4 1 7.56 6.04 72 5.73 83.93 42 6.39 Yes 22 1.39 Yes 0 0 No -34 0.92 Yes 36 95.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47751740 - NM_001318339 FNBP4 1 1.31 1.06 43 5.56 87.16 37 6.83 Yes 24 0.91 Yes 0 0 No -36 0.79 Yes 34 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47751743 - NM_001318339 FNBP4 1 2.75 2.22 57 8.43 84.12 34 6.64 Yes 21 0.91 Yes 33 0.64 Yes -33 0.82 Yes 37 83.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47753772 - NM_001318339 FNBP4 1 32.95 17.79 72 8.04 89.02 22 5.1 No 62 -4.99 No 21 0.63 Yes -19 0.69 Yes 51 61.78 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 47761656 - NM_001318339 FNBP4 1 1.36 1.22 46 6.79 83.92 33 7.21 Yes 20 1.71 Yes 0 0 No -24 0.65 No 38 75.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 47772234 - NM_001318339 FNBP4 1 1.23 1.19 51 3.01 0 64 6.67 Yes 51 2.58 Yes 0 0 No -58 0.9 Yes 12 81.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47772511 - NM_001318339 FNBP4 1 0.13 0.18 8 4.8 90.29 26 5.38 No 49 0.83 Yes 0 0 No -25 0.81 Yes 45 81.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47772578 - NM_001318339 FNBP4 1 0.18 0.22 12 5.42 0 14 4.47 No 45 1.47 Yes 0 0 No -28 0.7 Yes 42 84.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47773809 - NM_001318339 FNBP4 1 0.11 0.11 8 3.25 80.12 22 4.4 No 75 0.54 No 0 0 No -25 0.58 No 45 64.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 47773812 - NM_001318339 FNBP4 1 0.2 0.19 11 4.5 85.02 19 4.19 No 72 0.55 No 0 0 No -22 0.48 No 48 67.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 47778544 - NM_001318339 FNBP4 1 0.15 0.18 9 6.72 85.6 32 6.08 Yes 76 0.66 No 0 0 No -24 0.37 No 46 44.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49741381 + NM_014923 FNDC3A 1 0.07 0.14 7 2.73 85.56 26 5.97 Yes 6 0.58 No 0 0 No -35 0.57 No 35 56.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49742750 + NM_014923 FNDC3A 1 0.07 0.15 11 -12.82 70.07 27 5.56 Yes 14 0.48 No 0 0 No -25 0.41 No 49 34.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49752338 + NM_014923 FNDC3A 1 0.09 0.14 8 4.17 82.29 32 5.09 No 54 1.54 Yes 0 0 No -31 0.41 No 53 40.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 49765174 + NM_014923 FNDC3A 1 0.11 0.18 11 6.52 89.91 18 5.74 Yes 5 1.2 Yes 0 0 No -17 0.57 No 53 57.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 49775268 + NM_014923 FNDC3A 1 0.86 1.68 56 5.91 64.28 44 4.17 No 27 0.6 No 25 0.78 Yes -32 0.5 No 45 62.92 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 49775920 + NM_014923 FNDC3A 1 0.06 0.13 8 2.12 72.61 16 4.69 No 60 1.09 Yes 19 0.94 Yes -18 0.44 No 52 64.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 171799152 + NM_022763 FNDC3B 1 0.57 0.39 21 11.79 95.65 29 6.63 Yes 16 1.62 Yes 0 0 No -28 0.86 Yes 42 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 171830245 + NM_022763 FNDC3B 1 0.31 0.21 14 -5.42 0 27 5.44 No 25 1.08 Yes 0 0 No -26 0.68 Yes 44 62.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 171871435 + NM_022763 FNDC3B 1 0.2 0.24 15 4.96 84.44 20 4.16 No 54 -3.28 No 0 0 No -20 0.93 Yes 50 93.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 171873655 + NM_022763 FNDC3B 1 0.08 0.11 8 8.75 84.23 40 5.63 Yes 64 1.16 Yes 0 0 No -26 0.87 Yes 44 82.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 171902034 + NM_022763 FNDC3B 1 0.42 0.53 28 6.66 86.53 54 6.01 Yes 53 1.5 Yes 28 0.48 Yes -28 0.58 No 42 64.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 171902063 + NM_022763 FNDC3B 1 0.11 0.15 10 2.76 77.78 21 4.87 No 70 1.33 Yes 0 0 No -20 0.85 Yes 50 87.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 171904501 + NM_022763 FNDC3B 1 13.79 18.5 72 10.57 90.68 20 6.5 Yes 28 0.75 No 25 0.6 Yes -40 0.51 No 45 58.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 171923268 + NM_022763 FNDC3B 1 0.33 0.47 27 12.26 96.25 33 5.68 Yes 48 1.25 Yes 0 0 No -21 0.61 No 49 55.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 171979658 + NM_022763 FNDC3B 1 3.15 3 63 9.58 86.27 79 7.83 Yes 60 1.14 Yes 0 0 No -38 0.56 No 32 50.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 171992173 + NM_022763 FNDC3B 1 0.16 0.13 8 5.27 80.87 37 6.65 Yes 11 1.27 Yes 0 0 No -23 0.87 Yes 47 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 172013247 + NM_022763 FNDC3B 1 0.11 0.13 8 9.02 86.32 26 5.48 No 76 0.19 No 0 0 No -25 0.58 No 45 75.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 172037695 + NM_022763 FNDC3B 1 0.44 0.26 16 9.01 85.76 37 6.62 Yes 56 -2.22 No 0 0 No -31 0.5 No 39 63.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 172080515 + NM_022763 FNDC3B 1 0.12 0.11 8 8.77 81.59 19 5.87 Yes 6 0.81 Yes 0 0 No -37 0.52 No 33 33.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 172098188 + NM_022763 FNDC3B 1 0.56 0.38 20 4.38 87.08 33 5.22 No -2 0.1 No 0 0 No -26 0.53 No 46 45.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131011115 - NM_001346114 FNIP1 1 0.27 0.14 9 4.95 79.28 41 5.63 Yes -3 0.72 No 0 0 No -28 0.78 Yes 42 79.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131015957 - NM_001346114 FNIP1 1 0.52 0.31 17 10.53 88.62 25 6 Yes 12 0.6 No 0 0 No -24 0.63 No 46 78.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131031253 - NM_001346114 FNIP1 1 0.59 0.35 16 7.46 85.31 31 5.73 Yes 18 0.9 Yes 0 0 No -30 0.68 Yes 40 69.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131042885 - NM_001346114 FNIP1 1 0.36 0.22 15 5.94 78.37 15 4.89 No 63 0.96 Yes 0 0 No -22 0.47 No 48 52.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131051687 - NM_001346114 FNIP1 1 11.34 0.99 39 7.47 83.3 24 6.25 Yes 56 1.14 Yes 0 0 No -23 0.71 Yes 47 63.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 159754952 + NM_001346043 FNIP2 1 2.3 1.39 49 12.79 86.46 65 9.11 Yes 52 0.95 Yes 37 0.3 Yes -37 0.43 No 16 50.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 159772536 + NM_001346043 FNIP2 1 0.51 0.19 9 7.42 86.38 31 3.98 No 44 0.99 Yes 0 0 No -24 0.49 No 46 59.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 159792572 + NM_001346043 FNIP2 1 4.34 0.85 35 2.69 88.76 22 5 No 26 0.64 No 0 0 No -21 0.72 Yes 49 86.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 159800717 + NM_001346043 FNIP2 1 3.74 0.6 28 11.48 82.91 30 5.57 Yes 72 0.84 Yes 0 0 No -30 0.64 No 41 84.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 42916882 + NM_002027 FNTA 1 0.13 0.21 14 3.05 84.41 34 5.97 Yes 4 0.46 No 0 0 No -28 0.75 Yes 42 67.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 42916907 + NM_002027 FNTA 1 0.33 0.47 23 5.5 90.92 28 5.29 No 29 0.44 No 0 0 No -27 0.43 No 17 67.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 42917469 + NM_002027 FNTA 1 0.29 0.43 24 7.75 90.92 28 5.48 No 65 0.26 No 0 0 No -27 0.73 Yes 43 51.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 42919247 + NM_002027 FNTA 1 0.07 0.13 9 2.37 0 30 5.66 Yes 17 1.37 Yes 0 0 No -29 0.85 Yes 41 92.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42920760 + NM_002027 FNTA 1 0.08 0.13 8 9.91 81.4 34 6.16 Yes 55 2.27 Yes 0 0 No -33 0.89 Yes 37 96.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42923879 + NM_002027 FNTA 1 0.09 0.15 10 2.88 0 25 6.93 Yes 28 1.36 Yes 0 0 No -40 0.67 Yes 30 80.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42925244 + NM_002027 FNTA 1 0.41 0.88 38 2.43 69.26 27 6.49 Yes 14 0.74 No 26 0.7 Yes -34 0.36 No 36 62.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 42934164 + NM_002027 FNTA 1 0.24 0.46 22 3.47 75.67 22 5.92 Yes 9 1.62 Yes 0 0 No -21 0.79 Yes 49 72.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42935420 + NM_002027 FNTA 1 1.15 1.89 53 5.5 80.82 20 6.08 Yes 59 -2.7 No 0 0 No -32 0.83 Yes 38 86.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 20723249 + NM_017794 FOCAD 1 0.1 0.13 9 2.25 79.99 32 6.21 Yes 19 1.72 Yes 0 0 No -27 0.96 Yes 43 95.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 20737751 + NM_017794 FOCAD 1 0.12 0.14 10 5.77 77.59 42 4.54 No 41 0.01 No 0 0 No -21 0.78 Yes 49 54.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 20755301 + NM_017794 FOCAD 1 0.14 0.13 9 9.19 87.31 21 7.81 Yes 43 0.73 No 0 0 No -21 0.35 No 45 41.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 20755843 + NM_017794 FOCAD 1 0.79 0.76 34 6.5 85.51 43 7 Yes 30 1 Yes 0 0 No -42 0.76 Yes 28 80.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 20773782 + NM_017794 FOCAD 1 0.17 0.15 11 11.22 89.9 46 6.53 Yes 57 0.85 Yes 0 0 No -39 0.64 No 31 76.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 20781580 + NM_017794 FOCAD 1 0.13 0.15 10 12.36 90.72 35 5.32 No 39 1.1 Yes 0 0 No -23 0.83 Yes 47 91.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 20790382 + NM_017794 FOCAD 1 0.32 0.25 16 7.97 83.78 32 5.87 Yes 41 1.21 Yes 0 0 No -31 0.76 Yes 42 54.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 20863419 + NM_017794 FOCAD 1 0.15 0.19 11 6.93 80.99 22 5.1 No 9 0.66 No 21 0.69 Yes -25 0.56 No 46 49.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 20885086 + NM_017794 FOCAD 1 0.96 0.68 32 -4.42 46.59 42 6.93 Yes 17 -2.41 No 24 0.35 Yes -29 0.71 Yes 41 12.52 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 20885145 + NM_017794 FOCAD 1 2.05 1.47 57 4.95 82.42 42 6.44 Yes 5 0.75 No 28 0.64 Yes -28 0.5 No 42 65.48 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 20887691 + NM_017794 FOCAD 1 0.3 0.32 19 10.26 90.51 21 6.02 Yes 52 0.81 Yes 0 0 No -27 0.61 No 44 62.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 20929359 + NM_017794 FOCAD 1 1.88 2.06 57 -0.5 64.87 34 6.78 Yes 21 2.38 Yes 0 0 No -33 0.87 Yes 37 93.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 20957500 + NM_017794 FOCAD 1 0.44 0.4 24 3.06 0 40 7.07 Yes 27 1.14 Yes 39 0.47 Yes -39 0.63 No 31 64.92 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 20979724 + NM_017794 FOCAD 1 0.53 0.5 29 7.46 91.38 26 4.5 No 39 1.42 Yes 0 0 No -25 0.75 Yes 45 76.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 20979756 + NM_017794 FOCAD 1 0.11 0.1 7 4.98 73.31 27 6.39 Yes 71 1.44 Yes 0 0 No -26 0.89 Yes 44 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15961803 - NR_130756 FOPNL 1 0.12 0.15 10 5.41 90.92 28 4.22 No 61 2.25 Yes 0 0 No -57 0.85 Yes 13 89.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15961828 - NR_130756 FOPNL 1 0.22 0.33 17 2.9 84.41 33 7.01 Yes 36 2.27 Yes 0 0 No -32 0.92 Yes 38 90.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15965110 - NR_130756 FOPNL 1 0.07 0.11 7 8.05 76.77 58 9.01 Yes 45 1.43 Yes 0 0 No -37 0.59 No 33 69.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 15977982 - NR_130756 FOPNL 1 0.29 0.28 15 5.2 74.15 19 4.9 No 65 -6.18 No 18 0.65 Yes -23 0.68 Yes 47 56.32 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 15978086 - NR_130756 FOPNL 1 0.1 0.13 7 0.27 71.01 24 5.89 Yes 11 0.58 No 26 0.78 Yes -23 0.68 Yes 47 70.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65661588 - NM_005438 FOSL1 1 4.44 1.78 47 -1.71 0 26 6.63 Yes 13 1.02 Yes 20 0.89 Yes -25 0.91 Yes 45 90.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 8186662 + NM_018416 FOXJ2 1 3.55 0.99 43 5.4 73.37 22 5.2 No 66 0.26 No 0 0 No -21 0.85 Yes 49 78.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 8202945 + NM_018416 FOXJ2 1 1.53 0.36 20 8.29 88.18 34 9.84 Yes 37 0.28 No 33 0.83 Yes -33 0.64 No 37 78.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 8203750 + NM_018416 FOXJ2 1 0.85 0.18 11 11.25 91.74 77 14 Yes NA NA NA 0 0 No -24 0.38 No 40 22.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 42647512 - NM_001198851 FOXJ3 1 0.11 0.13 8 -1.73 64.5 11 4.48 No 43 0.39 No 0 0 No -55 0.86 Yes 15 44.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 42647619 - NM_001198851 FOXJ3 1 0.12 0.13 8 9.33 88.08 34 6.63 Yes 21 1.36 Yes 0 0 No -28 0.56 No 42 62.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 42647681 - NM_001198851 FOXJ3 1 1.13 1.24 48 1.72 67.74 21 4.9 No 39 1.61 Yes 0 0 No -20 0.56 No 19 74.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 42660691 - NM_001198851 FOXJ3 1 0.24 0.29 16 1.95 79.39 26 4.66 No 5 0.86 Yes 0 0 No -25 0.55 No 45 71.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 42710187 - NM_001198851 FOXJ3 1 0.27 0.42 23 8.98 83.7 31 7 Yes 18 2.62 Yes 0 0 No -30 0.8 Yes 40 87.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 42731584 - NM_001198851 FOXJ3 1 0.15 0.18 11 7.9 92.89 24 5.78 Yes 11 0.12 No 0 0 No -23 0.9 Yes 47 84.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 42744456 - NM_001198851 FOXJ3 1 10.19 7.76 72 9.64 93.79 25 8.28 Yes 12 1.34 Yes 0 0 No -28 0.55 No 42 67.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 4796444 + NM_001037165 FOXK1 1 0.14 0.13 7 4.41 74.57 26 6.44 Yes 49 -3.83 No 0 0 No -25 0.67 Yes 45 62.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80522701 + NM_004514 FOXK2 1 0.08 0.17 10 8.8 89.75 22 7.14 Yes 9 1.37 Yes 0 0 No -21 0.97 Yes 49 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80530075 + NM_004514 FOXK2 1 0.12 0.15 10 3.09 75.77 25 4.78 No 16 0.64 No 0 0 No -24 0.62 No 42 67.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 80531937 + NM_004514 FOXK2 1 0.61 0.85 39 14.02 88.24 33 7.68 Yes 20 1.51 Yes 0 0 No -32 0.76 Yes 38 84.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80540045 + NM_004514 FOXK2 1 0.09 0.14 10 2.38 78.5 25 5.1 No 12 0.88 Yes 0 0 No -24 0.95 Yes 46 97.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80541939 + NM_004514 FOXK2 1 0.24 0.28 14 6.36 77.18 29 5.29 No 45 1.24 Yes 0 0 No -28 0.88 Yes 42 79.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80543127 + NM_004514 FOXK2 1 0.57 0.76 34 9.13 89.43 51 7.36 Yes 38 1.13 Yes 30 0.68 Yes -30 0.78 Yes 40 71.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80545410 + NM_004514 FOXK2 1 0.35 0.53 27 9.21 78.05 30 5.83 Yes 25 0.38 No 0 0 No -29 0.58 No 37 71.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 80545557 + NM_004514 FOXK2 1 0.3 0.43 14 9.81 86.27 25 6.08 Yes 30 -0.02 No 0 0 No -34 0.34 No 40 37.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 80553657 + NM_004514 FOXK2 1 0.32 0.46 26 11.19 88.19 32 7.55 Yes 19 1.05 Yes 31 0.8 Yes -31 0.81 Yes 39 90.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 2969312 - NM_001243089 FOXM1 1 0.28 0.19 12 11.09 89.21 25 4.95 No 65 0.97 Yes 0 0 No -24 0.48 No 42 68.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 2970579 - NM_001243089 FOXM1 1 15.72 10.5 72 10.07 89.29 51 6.66 Yes 62 0.42 No 25 0.72 Yes -29 0.75 Yes 41 62.64 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 2973916 - NM_001243089 FOXM1 1 0.14 0.15 9 -7.61 0 12 3.76 No 28 1.11 Yes 22 0.71 Yes -40 0.92 Yes 30 94.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 2973922 - NM_001243089 FOXM1 1 6.57 4.89 68 1.84 66.81 35 6.08 Yes 22 1.13 Yes 34 0.83 Yes -34 0.92 Yes 36 94.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 2973922 - NM_001243089 FOXM1 1 0.19 0.14 8 1.84 66.81 35 6.08 Yes 22 1.13 Yes 34 0.83 Yes -34 0.92 Yes 36 94.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 2974566 - NM_001243089 FOXM1 1 101.68 66.01 72 0.9 71.48 43 9.41 Yes 30 1.69 Yes 32 0.89 Yes -43 0.5 No 33 60.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 2974566 - NM_001243089 FOXM1 1 0.54 0.39 21 0.9 71.48 43 9.41 Yes 30 1.69 Yes 32 0.89 Yes -43 0.5 No 33 60.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 2981414 - NM_001243089 FOXM1 1 154.15 71.06 72 6.15 83.88 30 5.98 Yes 17 0.19 No 29 0.84 Yes -29 0.84 Yes 41 94.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 48555655 + NM_002158 FOXN2 1 1.23 0.18 9 7.69 90.6 18 5.39 No 45 0.33 No 0 0 No -22 0.26 No 55 27.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48556154 + NM_002158 FOXN2 1 3.94 1.6 52 6.51 77.58 23 4.83 No 39 1.34 Yes 0 0 No -23 0.88 Yes 47 90.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48558713 + NM_002158 FOXN2 1 1.41 0.56 28 5.97 72.71 24 6.11 Yes 44 0.63 No 0 0 No -23 0.91 Yes 47 95.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48560056 + NM_002158 FOXN2 1 0.32 0.13 7 5.25 88.42 25 4.98 No 66 -4.72 No 0 0 No -24 0.69 Yes 46 40.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48560600 + NM_002158 FOXN2 1 0.57 0.24 14 6.61 92.61 25 5.05 No 5 0.55 No 0 0 No -24 0.67 Yes 46 71.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48561632 + NM_002158 FOXN2 1 4.56 1.72 51 4.74 82.42 21 5.91 Yes 8 1.09 Yes 0 0 No -20 0.82 Yes 50 94.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48561635 + NM_002158 FOXN2 1 2.15 0.82 36 4.61 86.62 24 6.15 Yes 11 1.1 Yes 0 0 No -23 0.86 Yes 47 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48591086 + NM_002158 FOXN2 1 0.42 0.54 25 8.21 83.96 34 6.61 Yes 21 1.16 Yes 0 0 No -28 0.57 No 42 71.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48593065 + NM_002158 FOXN2 1 0.25 0.29 17 6.73 81.09 37 6.56 Yes 24 0.43 No 0 0 No -36 0.87 Yes 34 90.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 89656794 - NM_005197 FOXN3 1 144.65 54.68 72 7.38 88.17 28 8.54 Yes 15 0.76 No 22 0.43 Yes -31 0.46 No 39 46.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 89656794 - NM_005197 FOXN3 1 0.33 0.11 7 7.38 88.17 28 8.54 Yes 15 0.76 No 22 0.43 Yes -31 0.46 No 39 46.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 89673009 - NM_005197 FOXN3 1 0.68 0.24 17 4.48 77.69 32 5.55 No 69 1.22 Yes 0 0 No -26 0.49 No 44 54.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 89697212 - NM_005197 FOXN3 1 0.28 0.11 7 5.73 92.52 20 4.4 No 63 -3.33 No 23 0.38 Yes -22 0.32 No 44 54.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 89713199 - NM_005197 FOXN3 1 0.42 0.15 11 7.93 90.55 30 7.27 Yes 17 2.29 Yes 0 0 No -29 0.93 Yes 41 94.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 89724850 - NM_005197 FOXN3 1 1.39 0.5 23 10.47 91.12 22 6.41 Yes 9 1.28 Yes 0 0 No -21 0.65 No 49 64.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 89730400 - NM_005197 FOXN3 1 7.72 2.69 62 4.46 83.78 39 6.66 Yes 15 1.05 Yes 27 0.46 Yes -33 0.57 No 37 88.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 89761861 - NM_005197 FOXN3 1 0.27 0.39 18 7.81 85.53 15 4.68 No 31 0.21 No 0 0 No -18 0.69 Yes 52 84.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 89767648 - NM_005197 FOXN3 1 0.22 0.26 17 11.32 87.72 25 7.48 Yes 12 1.49 Yes 0 0 No -24 0.92 Yes 46 95.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 89771574 - NM_005197 FOXN3 1 0.35 0.39 23 2.99 84.52 27 5.25 No 14 0.41 No 0 0 No -26 0.84 Yes 44 62.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 89771577 - NM_005197 FOXN3 1 0.18 0.25 14 -1.79 77.57 24 4.96 No 11 0.42 No 0 0 No -23 0.86 Yes 47 55.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 89792939 - NM_005197 FOXN3 1 0.24 0.31 18 9.5 85.94 33 4.58 No 59 0.43 No 0 0 No -27 0.72 Yes 43 77.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41219624 - NM_002015 FOXO1 1 0.35 0.18 12 3.26 0 15 4.43 No 30 0.04 No 0 0 No -32 0.42 No 52 55.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 41219636 - NM_002015 FOXO1 1 0.47 0.14 10 1.68 73.97 21 4.95 No -1 0.34 No 0 0 No -20 0.75 Yes 50 85.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41238616 - NM_002015 FOXO1 1 0.41 0.21 11 10.68 94.32 32 5.83 Yes 19 0.17 No 0 0 No -31 0.87 Yes 39 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 41540820 + NM_001012427 FOXP4 1 0.25 0.17 9 7.85 83.56 19 5.01 No 46 0.12 No 0 0 No -27 0.42 No 43 49.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 41546579 + NM_001012427 FOXP4 1 0.56 0.24 15 5.86 80.56 26 6 Yes 43 0.32 No 0 0 No -21 0.62 No 41 57.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 41555015 + NM_001012427 FOXP4 1 3.12 1.54 50 0.76 69.88 23 5.39 No NA NA NA 23 0.65 Yes -22 0.47 No 41 45.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 41555039 + NM_001012427 FOXP4 1 26.59 12.58 72 5.93 80.39 27 5.74 Yes NA NA NA 23 0.65 Yes -26 0.74 Yes 45 80.57 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 41555054 + NM_001012427 FOXP4 1 4.14 1.93 58 6.53 85.35 23 4.9 No NA NA NA 0 0 No -24 0.36 No 53 58.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 41555398 + NM_001012427 FOXP4 1 1 0.63 28 5.8 69.94 35 6.86 Yes 22 1.21 Yes 0 0 No -34 0.93 Yes 36 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 41555494 + NM_001012427 FOXP4 1 0.32 0.25 15 3.17 78.71 26 5.2 No 40 -3.04 No 28 0.95 Yes -25 0.47 No 45 67.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 41556610 + NM_001012427 FOXP4 1 0.98 0.56 29 8.95 87.27 26 5.39 No -1 0.51 No 0 0 No -25 0.77 Yes 45 70.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 41557736 + NM_001012427 FOXP4 1 184.52 36.43 72 6.33 78.86 34 5.73 Yes 21 1.33 Yes 33 0.57 Yes -33 0.52 No 30 71.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 126143210 + NR_037648 FOXRED1 1 0.36 0.5 26 0.13 0 17 3.5 No 4 0.53 No 23 0.44 Yes -17 0.77 Yes 53 88.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 126143233 + NR_037648 FOXRED1 1 1.4 1.81 59 -17.98 61.36 26 5.39 No 27 0.53 No 22 0.91 Yes -25 0.75 Yes 45 60.58 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 126144825 + NR_037648 FOXRED1 1 1.73 1.18 49 0.53 0 63 9.14 Yes 25 0.65 No 33 0.7 Yes -23 0.49 No 47 59.63 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 126146316 + NR_037648 FOXRED1 1 0.38 0.24 15 7.63 77.92 11 6.08 Yes 35 -1.5 No 0 0 No -20 0.59 No 40 65.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 126146347 + NR_037648 FOXRED1 1 0.96 0.57 27 3.35 86.14 21 5 No 66 -2.21 No 0 0 No -18 0.76 Yes 52 62.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 126146968 + NR_037648 FOXRED1 1 3.56 3.65 65 7.62 87.7 30 5.87 Yes -2 0.64 No 0 0 No -29 0.65 No 41 76.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 126147311 + NR_037648 FOXRED1 1 0.13 0.13 8 -4.1 0 11 4.12 No 70 -4.42 No 20 0.39 Yes -31 0.28 No 50 36.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 36886544 - NM_024955 FOXRED2 1 0.3 0.15 11 5.66 91.06 24 4.8 No 48 0.21 No 0 0 No -23 0.75 Yes 47 74.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 36889846 - NM_024955 FOXRED2 1 1.13 0.43 23 1.51 0 33 6.54 Yes 20 1.62 Yes 0 0 No -32 0.88 Yes 38 85.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 36893959 - NM_024955 FOXRED2 1 0.41 0.17 11 12.31 94.72 26 4.37 No 64 0.3 No 0 0 No -24 0.92 Yes 46 92.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130566422 + NM_001018078 FPGS 1 1.42 0.21 13 7.46 89.09 26 6.24 Yes -4 0.64 No 0 0 No -25 0.63 No 45 71.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 130568130 + NM_001018078 FPGS 1 0.19 0.43 24 6.58 78.69 11 6 Yes -2 0.4 No 0 0 No -29 0.62 No 41 71.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 130569239 + NM_001018078 FPGS 1 0.17 0.39 19 0.79 73.22 11 4.9 No -2 0.48 No 19 0.8 Yes -10 0.44 No 60 43.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 130569270 + NM_001018078 FPGS 1 2.77 5.99 71 6.8 80.42 12 5.29 No 26 0.32 No 21 0.43 Yes -21 0.46 No 49 72.61 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 130573281 + NM_001018078 FPGS 1 0.18 0.24 17 4.84 82.14 20 4.69 No 74 1.68 Yes 0 0 No -19 0.74 Yes 51 81.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130574990 + NM_001018078 FPGS 1 0.83 0.9 37 11.4 93.53 28 6.24 Yes 15 1.15 Yes 0 0 No -27 0.89 Yes 43 91.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130575452 + NM_001018078 FPGS 1 0.16 0.18 12 8.58 80.69 61 7.68 Yes 48 2.06 Yes 25 0.94 Yes -24 0.85 Yes 46 73.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 95431847 - NM_001347712 FRA10AC1 1 0.24 0.15 10 10.5 85.02 32 6 Yes 76 0.65 No 29 0.91 Yes -31 0.9 Yes 39 86.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 95435459 - NM_001347712 FRA10AC1 1 4.55 2.44 60 0.53 83.28 31 5.6 Yes 18 0.66 No 30 0.95 Yes -30 0.75 Yes 40 73.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 95441353 - NM_001347712 FRA10AC1 1 0.23 0.19 10 -17.49 54.59 33 6.6 Yes 20 0.91 Yes 0 0 No -32 0.65 No 38 79.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 95458149 - NM_001347712 FRA10AC1 1 0.52 0.4 22 1.43 0 34 6.01 Yes 21 0.66 No 0 0 No -33 0.41 No 37 62.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 190881000 + NM_004477 FRG1 1 7.91 10.5 68 7.43 88.97 39 6.13 Yes 33 0.72 No 0 0 No -31 0.84 Yes 39 89.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 190882016 + NM_004477 FRG1 1 0.12 0.24 12 9.98 86.86 27 5.96 Yes 14 0.08 No 26 0.44 Yes -30 0.45 No 40 60.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 190882583 + NM_004477 FRG1 1 0.14 0.29 18 8.85 79.87 25 5.15 No 12 0.09 No 28 0.72 Yes -28 0.68 Yes 42 50.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 190882961 + NM_004477 FRG1 1 0.12 0.25 10 0.57 77.82 19 5 No 51 0.69 No 22 0.89 Yes -26 0.47 No 41 36.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 190882977 + NM_004477 FRG1 1 0.05 0.1 7 -16.14 0 20 4.96 No 67 0.69 No 0 0 No -23 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 29630697 + NR_003579 FRG1BP 1 0.54 0.1 7 -2.61 0 37 5.95 Yes 31 0.7 No 30 0.57 Yes -29 0.76 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 116290738 - NM_002031 FRK 1 0.73 0.22 14 10.6 93.74 23 8.17 Yes 10 1.07 Yes 0 0 No -22 0.57 No 48 73.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 116293063 - NM_002031 FRK 1 1.05 0.39 21 9.55 76.54 50 6.61 Yes 33 1.45 Yes 0 0 No -24 0.71 Yes 46 76.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 116324558 - NM_002031 FRK 1 0.41 0.13 9 3.95 86.66 22 4.67 No 72 -4.38 No 0 0 No -21 0.59 No 49 30.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 13699472 - NM_001318337 FRMD4A 1 4.42 2.57 53 3.81 72.54 28 5.2 No 26 -2.96 No 0 0 No -22 0.89 Yes 48 81.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 13702504 - NM_001318337 FRMD4A 1 0.52 0.35 15 4.67 79.7 37 6.22 Yes 75 1.21 Yes 0 0 No -33 0.49 No 37 61.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 13702551 - NM_001318337 FRMD4A 1 1.96 0.83 37 -0.75 74.62 31 6.08 Yes 28 1.22 Yes 0 0 No -30 0.95 Yes 40 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13702551 - NM_001318337 FRMD4A 1 0.15 0.13 8 -0.75 74.62 31 6.08 Yes 28 1.22 Yes 0 0 No -30 0.95 Yes 40 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13702579 - NM_001318337 FRMD4A 1 0.38 0.18 8 -4.02 61.98 13 5 No 0 0.3 No 27 0.88 Yes -29 0.39 No 58 38.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 13726691 - NM_001318337 FRMD4A 1 0.19 0.11 8 8.19 69.73 29 6.49 Yes 16 0.06 No 0 0 No -25 0.63 No 42 63.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 13735518 - NM_001318337 FRMD4A 1 40.25 14.57 70 9.83 83.07 31 7.13 Yes 18 1.48 Yes 0 0 No -30 0.96 Yes 40 96.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13737975 - NM_001318337 FRMD4A 1 0.38 0.13 8 5.48 0 15 4.58 No 2 0.96 Yes 0 0 No -21 0.65 No 49 63.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 13740918 - NM_001318337 FRMD4A 1 0.48 0.29 16 3.03 74.98 23 5.29 No 10 0.27 No 0 0 No -22 0.81 Yes 48 66.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 13795101 - NM_001318337 FRMD4A 1 2.75 0.21 12 6.49 80.62 25 6.15 Yes 12 1.03 Yes 0 0 No -25 0.79 Yes 45 86.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 52158810 + NM_001042481 FRMD6 1 1.17 0.26 17 9.05 91.39 33 6.17 Yes 40 1.16 Yes 0 0 No -28 0.64 No 42 75.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 52166772 + NM_001042481 FRMD6 1 0.61 0.11 8 6.16 82.2 38 6.91 Yes 75 2.21 Yes 0 0 No -37 0.53 No 33 60.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 52194322 + NM_001042481 FRMD6 1 1.2 0.28 17 8.33 86.38 37 5.23 No 9 0.67 No 0 0 No -21 0.67 Yes 49 75.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65156855 + NM_031904 FRMD8 1 0.57 0.6 33 3.42 63.5 19 5.71 Yes 35 1.02 Yes 18 0.79 Yes -18 0.73 Yes 52 54.8 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 65160980 + NM_031904 FRMD8 1 0.25 0.24 17 7.79 65.17 42 6.57 Yes 33 0.73 No 0 0 No -19 0.42 No 32 43.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65162939 + NM_031904 FRMD8 1 0.15 0.14 8 2.65 77.89 29 5.29 No 65 -5.31 No 0 0 No -28 0.84 Yes 42 65.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 65168221 + NM_031904 FRMD8 1 0.33 0.35 16 7.1 85.6 30 6 Yes 45 -0.39 No 0 0 No -26 0.44 No 44 66.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65179301 + NM_031904 FRMD8 1 0.1 0.11 7 9.18 76.51 27 5.48 No 14 1.38 Yes 0 0 No -26 0.87 Yes 44 81.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100177089 - NM_001013660 FRRS1 1 1.97 0.57 28 10.84 85.41 41 6.48 Yes 28 0.1 No 27 0.65 Yes -25 0.65 No 43 66.28 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 100177577 - NM_001013660 FRRS1 1 1.39 0.44 22 5.18 69.36 23 5.4 No 59 1.01 Yes 0 0 No -22 0.58 No 48 54.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 100177717 - NM_001013660 FRRS1 1 0.43 0.11 8 -1.88 77.47 24 6.24 Yes 11 1.71 Yes 0 0 No -23 0.83 Yes 47 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100190855 - NM_001013660 FRRS1 1 2.16 0.94 43 6.31 72.64 31 6.91 Yes 1 0.68 No 0 0 No -34 0.45 No 36 65.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100214318 - NM_001013660 FRRS1 1 4.21 1.29 48 -2.5 0 10 4 No 20 1.13 Yes 0 0 No -33 0.55 No 38 44.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 69925294 + NM_001278355 FRS2 1 0.58 0.14 8 10.1 87.23 27 8.54 Yes 14 0.17 No 0 0 No -33 0.56 No 44 45.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 69931695 + NM_001278355 FRS2 1 28.37 4.99 69 5.25 84.79 21 4.66 No 58 0.98 Yes 20 0.86 Yes -20 0.84 Yes 50 92.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 69960271 + NM_001278355 FRS2 1 4.62 0.97 41 2.85 74.7 44 10.17 Yes 25 0.58 No 0 0 No -27 0.46 No 43 54.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 48501604 - NM_015030 FRYL 1 0.19 0.19 10 -3.28 0 18 4.53 No 65 0.74 No 0 0 No -32 0.64 No 36 65.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 48534205 - NM_015030 FRYL 1 0.29 0.21 9 8.95 90.37 23 7.61 Yes 10 0.86 Yes 0 0 No -23 0.85 Yes 47 75.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48542042 - NM_015030 FRYL 1 0.36 0.39 23 3.48 78.9 49 5.62 Yes 20 1.13 Yes 0 0 No -33 0.57 No 38 77.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 48546012 - NM_015030 FRYL 1 0.67 0.56 30 1.64 70.83 44 5.36 No 65 0.21 No 0 0 No -31 0.48 No 44 44.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 48548286 - NM_015030 FRYL 1 19.66 13.06 72 8.17 93.89 22 5.89 Yes 9 0.88 Yes 21 0.82 Yes -24 0.96 Yes 46 94.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 48549672 - NM_015030 FRYL 1 0.39 0.31 21 9.85 92.06 32 6.48 Yes 64 0.94 Yes 0 0 No -31 0.82 Yes 39 90.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48567024 - NM_015030 FRYL 1 0.24 0.28 18 8.65 80.88 41 6.68 Yes 41 1.11 Yes 19 0.62 Yes -23 0.79 Yes 47 52.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 48572341 - NM_015030 FRYL 1 0.21 0.21 11 8.87 81.46 22 4.65 No 9 1.21 Yes 0 0 No -24 0.66 Yes 46 72.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48573913 - NM_015030 FRYL 1 0.92 0.56 29 7.06 84.38 18 3.93 No -4 0.13 No 0 0 No -24 0.67 Yes 46 79.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 48575089 - NM_015030 FRYL 1 0.42 0.26 18 7.33 83.29 25 5.03 No 71 0.57 No 0 0 No -24 0.54 No 46 67.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 48578237 - NM_015030 FRYL 1 2.51 2.57 62 6.37 83.47 36 8.8 Yes 23 0.89 Yes 0 0 No -35 0.8 Yes 35 91.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48583579 - NM_015030 FRYL 1 0.18 0.17 10 5.1 75.65 32 5.82 Yes 19 1.31 Yes 0 0 No -31 0.84 Yes 39 95.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48584675 - NM_015030 FRYL 1 0.15 0.13 9 7.8 86.52 17 5.57 Yes 4 1.98 Yes 0 0 No -16 0.58 No 46 73.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 48597732 - NM_015030 FRYL 1 0.24 0.22 12 4.87 66.75 36 7.47 Yes -1 0.02 No 21 0.84 Yes -35 0.77 Yes 35 91.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 48600891 - NM_015030 FRYL 1 41.01 20.63 72 6.6 78.42 91 7.26 Yes 24 1.19 Yes 0 0 No -36 0.69 Yes 40 66.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 48610354 - NM_015030 FRYL 1 0.45 0.49 23 5.39 83.56 13 4.87 No 22 -2.39 No 0 0 No -28 0.52 No 50 45.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 48637845 - NM_015030 FRYL 1 0.54 0.5 22 9.21 83.91 26 5.98 Yes 13 0.93 Yes 0 0 No -25 0.42 No 40 54.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 48640581 - NM_015030 FRYL 1 0.61 0.61 30 8.27 87.88 26 5.41 No 13 0.83 Yes 25 0.81 Yes -25 0.6 No 45 89.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 48644379 - NM_015030 FRYL 1 0.15 0.15 11 10.7 91.61 28 5.29 No 15 0.38 No 0 0 No -27 0.89 Yes 43 84.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 48648035 - NM_015030 FRYL 1 2.01 2.17 62 3.78 80.01 22 4.42 No 63 0.81 Yes 21 0.85 Yes -21 0.86 Yes 49 81.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 48655986 - NM_015030 FRYL 1 0.15 0.15 8 3.95 78.59 20 5.1 No 41 0.67 No 0 0 No -23 0.66 No 47 79.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 48729509 - NM_015030 FRYL 1 0.21 0.13 9 7.98 91.56 49 5.94 Yes 58 1.04 Yes 26 0.83 Yes -26 0.67 Yes 38 80.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 5642353 + NM_003088 FSCN1 1 0.04 0.24 15 3.64 0 26 6.71 Yes 13 0.84 Yes 0 0 No -25 0.8 Yes 45 76.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5643502 + NM_003088 FSCN1 1 0.21 1.42 45 -9.05 0 19 4.24 No 18 2.23 Yes 0 0 No -34 0.9 Yes 36 89.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5644586 + NM_003088 FSCN1 1 0.13 1.26 39 4.65 85.02 19 6.55 Yes 6 1.41 Yes 0 0 No -18 0.85 Yes 52 87.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5644589 + NM_003088 FSCN1 1 0.13 1.21 46 3.49 80.12 22 6.78 Yes 9 1.38 Yes 0 0 No -21 0.92 Yes 49 93.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5644911 + NM_003088 FSCN1 1 0.02 0.21 12 3.25 0 12 4.24 No 12 0.13 No 0 0 No -27 0.92 Yes 43 78.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 108234186 + NM_001145313 FSD1L 1 0.28 0.15 9 -5.08 80.85 30 5.39 No 17 1.52 Yes 0 0 No -25 0.66 No 41 59.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 108246746 + NM_001145313 FSD1L 1 0.67 0.15 9 5.03 88.54 28 4.4 No 58 0.46 No 0 0 No -23 0.95 Yes 47 93.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 108270931 + NM_001145313 FSD1L 1 2.05 2.94 55 2.24 77.87 23 4.65 No 46 0.45 No 0 0 No -22 0.73 Yes 48 73.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 108311417 + NM_001145313 FSD1L 1 0.12 0.13 7 10.06 98.6 22 4.88 No 27 0.71 No 0 0 No -21 0.92 Yes 49 96.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61732363 - NM_002032 FTH1 1 0 0.38 18 -12.17 0 26 6.63 Yes 13 2.3 Yes 0 0 No -25 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 61732578 - NM_002032 FTH1 1 0.05 6.15 72 -4.75 0 14 3.97 No 11 1.79 Yes 20 0.6 Yes -23 0.45 No 43 61.27 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 61732584 - NM_002032 FTH1 1 0 0.19 12 -11.4 0 18 5.83 Yes 5 1.8 Yes 20 0.6 Yes -21 0.56 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 61732618 - NM_002032 FTH1 1 0 0.26 11 0.52 0 26 6.08 Yes 48 1.19 Yes 20 0.6 Yes -25 0.48 No 57 46.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 61732916 - NM_002032 FTH1 1 0.01 0.88 33 -5.56 66.38 40 6.66 Yes 76 0.78 Yes 0 0 No -27 0.42 No 45 37.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 61732952 - NM_002032 FTH1 1 0 0.13 9 2.93 71.14 24 4.62 No 40 0.79 Yes 0 0 No -23 0.7 Yes 41 34.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 61733050 - NM_002032 FTH1 1 0.19 15.56 72 11.21 80.19 26 5.39 No 13 1.53 Yes 25 0.97 Yes -25 0.89 Yes 45 95.38 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61734533 - NM_002032 FTH1 1 0 0.13 8 7.34 85.75 33 6.24 Yes 40 0.6 No 0 0 No -18 0.83 Yes 52 91.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49469063 + NM_000146 FTL 1 0 0.1 7 0.18 72.6 16 6.78 Yes 54 2.57 Yes 0 0 No -24 0.6 No 46 14.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 49469540 + NM_000146 FTL 1 0.23 18.64 72 -0.49 70.28 27 5.74 Yes 14 1.34 Yes 0 0 No -26 0.82 Yes 44 83.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49469803 + NM_000146 FTL 1 0.02 1.92 55 11.67 90.54 37 8.39 Yes 46 0.76 No 22 0.87 Yes -30 0.77 Yes 34 66.86 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 53848581 + NM_001080432 FTO 1 0.2 0.17 11 9.04 81.93 21 5.6 Yes 8 1.01 Yes 25 0.79 Yes -25 0.84 Yes 45 76.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 53872038 + NM_001080432 FTO 1 0.2 0.13 9 4.57 86.81 61 9.38 Yes 48 1 Yes 0 0 No -21 0.61 No 49 57.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 53896470 + NM_001080432 FTO 1 0.64 0.68 35 9.33 85.05 23 8.06 Yes 36 1.05 Yes 0 0 No -22 0.77 Yes 48 81.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53908486 + NM_001080432 FTO 1 0.33 0.31 10 7.09 81.79 29 5.91 Yes 28 1.43 Yes 0 0 No -28 0.58 No 42 79.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 48336834 + NM_177439 FTSJ1 1 0.12 0.22 13 -11.19 0 28 5.57 Yes 15 0.68 No 29 0.96 Yes -13 0.47 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 48339706 + NM_177439 FTSJ1 1 0.17 0.15 11 1.75 68.46 25 6.24 Yes 39 1.03 Yes 0 0 No -24 0.85 Yes 46 63.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 48340790 + NM_177439 FTSJ1 1 1.92 0.83 31 5.22 71.4 24 5.48 No 22 2.17 Yes 23 0.9 Yes -23 0.91 Yes 47 92.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48340355 + NM_177439 FTSJ1 1 0.35 0.14 10 3.17 81.57 32 6.64 Yes 19 0.43 No 0 0 No -31 0.88 Yes 39 85.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48340769 + NM_177439 FTSJ1 1 0.74 0.31 18 8.45 77 14 5.48 No 1 2.16 Yes 23 0.9 Yes -19 0.69 Yes 51 53.1 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 48340790 + NM_177439 FTSJ1 1 230.57 91.56 72 5.22 71.4 24 5.48 No 22 2.17 Yes 23 0.9 Yes -23 0.91 Yes 47 92.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48340807 + NM_177439 FTSJ1 1 0.54 0.21 13 -2.29 0 20 4.47 No 39 2.14 Yes 23 0.9 Yes -40 0.82 Yes 30 73.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48340988 + NM_177439 FTSJ1 1 0.18 0.25 16 2.57 0 34 6.92 Yes 21 1.77 Yes 0 0 No -33 0.96 Yes 37 97.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48341050 + NM_177439 FTSJ1 1 2.52 3.13 60 4 75.2 31 5.74 Yes 40 -0.19 No 0 0 No -30 0.7 Yes 40 86.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48341628 + NM_177439 FTSJ1 1 0.46 0.5 26 3.31 77.73 20 3.65 No 18 0.66 No 23 0.89 Yes -23 0.63 No 47 74.35 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 48341640 + NM_177439 FTSJ1 1 0.13 0.13 9 6.31 0 15 4.58 No 30 0.67 No 0 0 No -19 0.86 Yes 51 78.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48344162 + NM_177439 FTSJ1 1 0.29 0.31 17 1.76 79.49 20 5.06 No -4 0.15 No 0 0 No -24 0.73 Yes 46 59.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 61900123 - NM_017647 FTSJ3 1 1.16 1.35 52 6.03 90.27 27 5.29 No 67 -1.53 No 0 0 No -26 0.7 Yes 44 54.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 61902465 - NM_017647 FTSJ3 1 0.29 0.53 32 6.39 80.97 21 4.16 No 8 1.02 Yes 0 0 No -35 0.62 No 35 68.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 73494207 - NR_028379 FTX 1 2.86 0.31 16 6.29 73.09 25 5.45 No 41 1.02 Yes 0 0 No -24 0.8 Yes 46 68.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 78414600 - NM_003902 FUBP1 1 0.23 0.89 41 9.62 95.88 29 5.74 Yes 44 0.38 No 23 0.63 Yes -28 0.64 No 42 58.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 78414981 - NM_003902 FUBP1 1 0.06 0.29 18 -0.44 0 28 5.39 No 56 -3.92 No 30 0.68 Yes -28 0.79 Yes 42 77.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 78417270 - NM_003902 FUBP1 1 0.19 0.86 45 8.7 75.99 32 5.27 No 75 0.53 No 0 0 No -28 0.5 No 42 61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 78421012 - NM_003902 FUBP1 1 0.44 1.42 57 -17.11 57.39 37 8.53 Yes 24 0.95 Yes 0 0 No -37 0.5 No 34 63.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 78427452 - NM_003902 FUBP1 1 0.25 1.61 55 8.29 92.68 23 5.56 Yes 10 1.39 Yes 0 0 No -22 0.92 Yes 48 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78430057 - NM_003902 FUBP1 1 0.03 0.22 14 4.34 73.97 26 5 No 13 0.51 No 23 0.86 Yes -25 0.37 No 52 49.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 78432637 - NM_003902 FUBP1 1 0.03 0.17 10 -5.45 0 37 5.82 Yes -4 0.83 Yes 0 0 No -36 0.62 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 78432783 - NM_003902 FUBP1 1 213.94 289.81 72 8.14 92.11 35 6.19 Yes 62 0.57 No 27 0.52 Yes -34 0.51 No 32 59.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 78433349 - NM_003902 FUBP1 1 0.02 0.15 10 -26.7 0 51 5.79 Yes 25 0.52 No 0 0 No -37 0.31 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 78433366 - NM_003902 FUBP1 1 0.02 0.14 7 -1.27 0 34 4.95 No 45 0.5 No 23 0.72 Yes -27 0.29 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 78433378 - NM_003902 FUBP1 1 0.03 0.21 12 -1.56 0 22 5.07 No 33 0.49 No 23 0.72 Yes -21 0.32 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 78434769 - NM_003902 FUBP1 1 1.89 9.65 72 7.62 82.01 27 6.85 Yes 14 1.05 Yes 26 0.79 Yes -26 0.58 No 44 65.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 78439458 - NM_003902 FUBP1 1 0.03 0.11 8 6.78 74.27 18 5.82 Yes 76 -3.14 No 0 0 No -17 0.56 No 53 76.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 133456045 + NM_003934 FUBP3 1 2.13 2.72 60 6.71 84.89 23 6.47 Yes 10 0.87 Yes 22 0.86 Yes -22 0.6 No 48 81.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 133469029 + NM_003934 FUBP3 1 0.2 0.25 12 9.5 98.51 29 6.33 Yes 58 0.68 No 0 0 No -28 0.72 Yes 39 54.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 133485343 + NM_003934 FUBP3 1 0.11 0.18 7 4.97 78.95 42 7.84 Yes 29 2.48 Yes 0 0 No -41 0.88 Yes 29 93.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 133471923 + NM_003934 FUBP3 1 0.18 0.25 14 7.45 75.15 13 6.19 Yes 42 1.49 Yes 0 0 No -35 0.56 No 35 67.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 133473000 + NM_003934 FUBP3 1 0.15 0.22 13 5.72 81.47 20 5.44 No 7 0.86 Yes 0 0 No -23 0.92 Yes 47 86.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 133483095 + NM_003934 FUBP3 1 0.11 0.15 10 10.35 90.09 22 5.8 Yes 9 1.41 Yes 0 0 No -21 0.81 Yes 49 89.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 133485343 + NM_003934 FUBP3 1 3.37 4.67 71 4.97 78.95 42 7.84 Yes 29 2.48 Yes 0 0 No -41 0.88 Yes 29 93.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 133485913 + NM_003934 FUBP3 1 0.85 1.24 52 8.66 75.69 28 6.24 Yes 15 1.46 Yes 0 0 No -27 0.9 Yes 43 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 133489722 + NM_003934 FUBP3 1 0.1 0.13 9 2.02 68.24 14 5.18 No 58 1.4 Yes 0 0 No -13 0.53 No 57 56.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 133491723 + NM_003934 FUBP3 1 0.09 0.13 7 -2.09 0 19 6.01 Yes 68 1.61 Yes 36 0.26 Yes -18 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 133506547 + NM_003934 FUBP3 1 3.3 2.14 63 5.33 68.58 14 5.53 No 1 1.62 Yes 24 0.51 Yes -17 0.69 Yes 53 66.76 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 133509005 + NM_003934 FUBP3 1 0.77 0.58 31 8.19 98.6 32 5.19 No 22 0.63 No 0 0 No -25 0.61 No 45 58.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 24183874 - NM_000147 FUCA1 1 0.5 0.43 23 6.36 77.72 27 8.03 Yes 73 0.53 No 0 0 No -26 0.78 Yes 44 76.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 24191833 - NM_000147 FUCA1 1 0.15 0.19 11 11.05 85.19 38 6.55 Yes 25 1 Yes 0 0 No -37 0.68 Yes 33 68.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 24192462 - NM_000147 FUCA1 1 0.17 0.14 8 8.79 96.81 23 4.9 No 34 0.13 No 0 0 No -22 0.74 Yes 48 70.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 143817266 - NM_032020 FUCA2 1 0.24 0.15 10 7.82 76.99 14 6.16 Yes 1 1.62 Yes 0 0 No -33 0.65 No 37 60.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 143823622 - NM_032020 FUCA2 1 0.66 0.51 22 5.51 87.44 26 5.66 Yes 13 0.06 No 0 0 No -22 0.6 No 48 64.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 143825223 - NM_032020 FUCA2 1 1.12 0.69 35 4.79 80.25 60 7.82 Yes 47 1.98 Yes 0 0 No -26 0.8 Yes 32 78.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70503030 + NM_145059 FUK 1 0.79 0.14 9 3.91 65.55 21 6.44 Yes 29 -2.37 No 29 0.58 Yes -20 0.56 No 50 51.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 70505100 + NM_145059 FUK 1 1.98 0.38 21 3.54 76.38 22 5 No NA NA NA 30 0.58 Yes -21 0.52 No 49 44.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 70506416 + NM_145059 FUK 1 2.95 0.31 20 9.45 81.02 24 6.32 Yes 11 2.33 Yes 23 0.94 Yes -23 0.85 Yes 47 83.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70506445 + NM_145059 FUK 1 0.78 0.11 8 -1.5 72.29 25 6.16 Yes 12 2.38 Yes 0 0 No -24 0.87 Yes 46 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70508528 + NM_145059 FUK 1 16.48 1.14 46 8.93 89.4 24 4.97 No 16 0.43 No 22 0.94 Yes -23 0.95 Yes 47 89.44 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70509285 + NM_145059 FUK 1 1.19 0.15 11 6.7 91.69 23 5.29 No 39 1.42 Yes 0 0 No -22 0.58 No 48 65.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 70509285 + NM_145059 FUK 1 1.74 0.21 10 6.7 91.69 23 5.29 No 39 1.42 Yes 0 0 No -22 0.58 No 48 65.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 70510089 + NM_145059 FUK 1 2.64 0.32 18 5.12 85.02 19 7.07 Yes 6 1.26 Yes 18 0.7 Yes -18 0.73 Yes 52 86.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70512699 + NM_145059 FUK 1 2.2 0.21 13 10.8 93.59 19 5.48 No 70 -2.29 No 26 0.46 Yes -18 0.62 No 52 67.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 70513028 + NM_145059 FUK 1 2.03 0.26 15 5.95 77.08 35 6.02 Yes 76 0.33 No 0 0 No -34 0.82 Yes 36 74.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 154275643 + NM_023934 FUNDC2 1 0.06 0.21 13 11.52 84.49 25 4.27 No 17 0.64 No 24 0.96 Yes -24 0.92 Yes 46 97.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 135168974 - NM_001301828 FUOM 1 3.05 1.25 46 5.68 81.57 31 5.74 Yes 18 0.37 No 25 0.91 Yes -29 0.74 Yes 40 68.62 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 135169010 - NM_001301828 FUOM 1 22.14 9.65 72 9.85 83.86 14 5.29 No 27 -1.74 No 23 0.89 Yes -23 0.7 Yes 47 82.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 135169010 - NM_001301828 FUOM 1 0.25 0.13 8 9.85 83.86 14 5.29 No 27 -1.74 No 23 0.89 Yes -23 0.7 Yes 47 82.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 135169349 - NM_001301828 FUOM 1 7.15 3.64 67 4.07 85.9 16 4.63 No 3 -0.18 No 23 0.8 Yes -15 0.43 No 52 55.69 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 91420691 + NM_002569 FURIN 1 0.38 0.14 9 6.24 87.8 38 7.2 Yes 33 -1.14 No 0 0 No -37 0.72 Yes 44 49.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 91421391 + NM_002569 FURIN 1 0.29 0.1 7 -9.08 0 10 4 No 68 1.03 Yes 28 0.76 Yes -61 0.35 No 55 19.79 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 91421446 + NM_002569 FURIN 1 0.37 0.17 10 3 76.94 27 7.27 Yes 14 0.64 No 0 0 No -26 0.39 No 51 45.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 91422106 + NM_002569 FURIN 1 0.87 0.14 9 0.71 72.41 26 5.47 No 40 -2.02 No 0 0 No -25 0.38 No 45 60.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 91422451 + NM_002569 FURIN 1 0.37 0.15 7 6.56 75.84 38 7.47 Yes 25 0.84 Yes 0 0 No -37 0.87 Yes 33 72.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31193721 + NM_004960 FUS 1 0.02 0.17 11 -16.2 0 29 4.37 No 48 0.63 No 0 0 No -28 0.62 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31195181 + NM_004960 FUS 1 0.01 0.11 8 4.1 81.99 68 8.47 Yes 55 1.8 Yes 24 0.89 Yes -27 0.77 Yes 43 85.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 31195181 + NM_004960 FUS 1 0.05 0.47 23 4.1 81.99 68 8.47 Yes 55 1.8 Yes 24 0.89 Yes -27 0.77 Yes 43 85.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 31195181 + NM_004960 FUS 1 43.06 412.31 72 4.1 81.99 68 8.47 Yes 55 1.8 Yes 24 0.89 Yes -27 0.77 Yes 43 85.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 31198078 + NM_004960 FUS 1 0.03 0.31 17 1.87 71.15 29 7.24 Yes 17 -1.82 No 0 0 No -28 0.45 No 42 59.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31200440 + NM_004960 FUS 1 0.84 12.93 72 1.73 69.53 28 7.09 Yes 15 0.64 No 27 0.9 Yes -27 0.79 Yes 43 78.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 31201366 + NM_004960 FUS 1 0.04 0.54 23 -4.43 0 9 3.87 No 40 1.11 Yes 0 0 No -37 0.64 No 33 59.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 31201652 + NM_004960 FUS 1 0.06 0.38 22 -11.68 62.33 23 5.39 No 47 -4.96 No 28 0.16 Yes -22 0.48 No 41 76.79 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 31202262 + NM_004960 FUS 1 0.06 0.35 20 -3.66 57.11 26 5 No 38 0.46 No 25 0.67 Yes -23 0.24 No 54 18.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 33246701 - NM_032664 FUT10 1 0.35 0.11 7 5.91 94.21 19 5 No 28 0.31 No 0 0 No -21 0.51 No 49 71.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 33251774 - NM_032664 FUT10 1 0.82 0.21 12 9.52 85.2 31 6.4 Yes 18 0.61 No 0 0 No -30 0.93 Yes 40 90.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 33309397 - NM_032664 FUT10 1 0.7 0.17 10 0.07 63.94 24 4.68 No 1 1.13 Yes 0 0 No -23 0.93 Yes 47 93.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 33318290 - NM_032664 FUT10 1 12.45 2 56 11.59 93.4 27 6.92 Yes 14 1.31 Yes 26 0.93 Yes -26 0.79 Yes 44 73.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 33329071 - NM_032664 FUT10 1 0.37 0.1 7 3.49 73.78 25 6.33 Yes 66 -2.93 No 0 0 No -25 0.71 Yes 45 71.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 75532951 + NM_001284194 FUT11 1 22.92 5.1 70 -1.13 0 29 5.07 No 16 -1.17 No 27 0.89 Yes -31 0.7 Yes 39 81.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 66034625 + NM_178156 FUT8 1 0.29 0.65 30 11.01 86.03 28 4.3 No 62 1.88 Yes 0 0 No -30 0.94 Yes 40 95.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 66039929 + NM_178156 FUT8 1 1.11 2.26 62 7.98 75.24 37 6.08 Yes 47 -2.43 No 0 0 No -24 0.53 No 46 72.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 66078399 + NM_178156 FUT8 1 0.11 0.22 10 3.02 81.93 34 7.86 Yes 21 0.85 Yes 0 0 No -33 0.67 Yes 33 73.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 66083002 + NM_178156 FUT8 1 0.25 0.42 23 8.69 92.56 24 5.2 No 11 0.35 No 0 0 No -23 0.89 Yes 47 84.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 66083804 + NM_178156 FUT8 1 0.47 1.11 40 2.52 84.21 18 4.52 No 33 0.59 No 21 0.75 Yes -18 0.67 Yes 48 72.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 66083807 + NM_178156 FUT8 1 2.91 6.61 70 4.07 82.36 21 4.82 No 36 0.59 No 21 0.75 Yes -21 0.78 Yes 49 81.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 66083836 + NM_178156 FUT8 1 0.08 0.18 13 2.12 72.86 23 6.1 Yes 10 1.2 Yes 0 0 No -22 0.91 Yes 48 90.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 66099742 + NM_178156 FUT8 1 3.76 5.04 70 11.73 85.01 60 7.94 Yes 47 0.78 Yes 0 0 No -59 0.7 Yes 11 49.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 66099855 + NM_178156 FUT8 1 0.23 0.33 18 3.69 84.22 35 8.26 Yes 3 1.45 Yes 0 0 No -34 0.8 Yes 36 88.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 66100103 + NM_178156 FUT8 1 0.1 0.14 7 3.82 80.01 32 6.85 Yes 61 -2.33 No 0 0 No -31 0.87 Yes 39 78.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 66106741 + NM_178156 FUT8 1 0.08 0.13 8 3.48 77.02 69 8.31 Yes 56 0.52 No 0 0 No -25 0.45 No 41 34.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 66112677 + NM_178156 FUT8 1 0.42 0.67 25 7.5 92.69 16 4.35 No 9 1.02 Yes 21 0.76 Yes -21 0.9 Yes 49 90.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 66113237 + NM_178156 FUT8 1 0.27 0.4 22 10.84 76.82 30 4.81 No 24 1.69 Yes 29 0.96 Yes -29 0.83 Yes 41 67.5 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 66139196 + NM_178156 FUT8 1 0.07 0.15 10 9.2 87.64 28 5.37 No 25 0.31 No 0 0 No -27 0.86 Yes 43 81.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 66190866 + NM_178156 FUT8 1 0.19 0.43 23 -8.01 74.29 17 5.27 No 4 0.78 Yes 0 0 No -27 0.47 No 43 60.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 66199995 + NM_178156 FUT8 1 0.15 0.31 18 5.37 83.01 19 4.07 No 6 1.32 Yes 0 0 No -28 0.71 Yes 42 55.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 66203252 + NM_178156 FUT8 1 0.17 0.31 16 5.12 81.44 60 7.03 Yes 5 0.75 No 0 0 No -22 0.55 No 48 74.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 66207284 + NM_178156 FUT8 1 0.06 0.11 7 7.54 88.89 21 5.82 Yes 0 0.16 No 0 0 No -20 0.87 Yes 50 85.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 66208880 + NM_178156 FUT8 1 0.13 0.28 17 6.66 80.35 28 8.3 Yes 15 1.69 Yes 0 0 No -27 0.71 Yes 43 78.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50311149 - NM_025129 FUZ 1 1.07 0.22 15 -0.25 60.1 22 5.29 No 44 -3.2 No 0 0 No -19 0.67 Yes 51 65.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 50311417 - NM_025129 FUZ 1 15.74 3.06 66 4.26 81.9 26 4.73 No 0 1.47 Yes 25 0.93 Yes -25 0.82 Yes 45 94.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50311749 - NM_025129 FUZ 1 3.04 0.71 38 7.38 88.13 19 6.24 Yes 6 0.87 Yes 18 0.64 Yes -21 0.85 Yes 49 73.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50314749 - NM_025129 FUZ 1 6.21 0.88 30 4.93 73.47 25 6.92 Yes 12 0.4 No 24 0.96 Yes -24 0.88 Yes 46 88.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 71651546 + NM_001161706 FXN 1 0.45 0.25 15 10.29 90.66 24 5.48 No 20 1.38 Yes 0 0 No -23 0.89 Yes 47 74.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180652514 + NM_001013439 FXR1 1 0.06 0.18 10 9.43 85.81 32 7.03 Yes 19 0.32 No 0 0 No -31 0.44 No 39 67.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 180671551 + NM_001013439 FXR1 1 0.09 0.22 15 -16.3 68.5 41 6.38 Yes 65 1.15 Yes 0 0 No -28 0.93 Yes 42 87.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180674116 + NM_001013439 FXR1 1 0.04 0.14 8 7.31 86.82 28 4.68 No 43 0.98 Yes 0 0 No -21 0.56 No 49 69.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 180674362 + NM_001013439 FXR1 1 0.05 0.17 11 3.97 80.94 23 5.2 No 24 1.26 Yes 0 0 No -42 0.39 No 48 53.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 180680822 + NM_001013439 FXR1 1 0.09 0.28 16 0.87 0 10 4 No 22 1.07 Yes 0 0 No -34 0.92 Yes 36 93.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180681591 + NM_001013439 FXR1 1 0.08 0.31 18 9.53 90.92 30 6.65 Yes 17 1.46 Yes 0 0 No -29 0.74 Yes 41 93.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180685916 + NM_001013439 FXR1 1 0.2 0.69 37 1.84 84.14 16 3.97 No 54 1.13 Yes 0 0 No -19 0.73 Yes 51 63.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 180687792 + NM_001013439 FXR1 1 0.04 0.17 8 11.8 98.25 22 5.97 Yes 57 1.22 Yes 0 0 No -31 0.52 No 42 55.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 180688039 + NM_001013439 FXR1 1 0.11 0.46 27 1.72 74.84 23 4.9 No 10 0.26 No 0 0 No -22 0.93 Yes 48 89.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 180688054 + NM_001013439 FXR1 1 0.05 0.25 14 1.78 71.13 11 4.78 No -2 1.36 Yes 0 0 No -22 0.91 Yes 48 71.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180688862 + NM_001013439 FXR1 1 0.41 0.53 27 3.51 85.53 23 4.67 No 20 -2.74 No 22 0.89 Yes -22 0.95 Yes 48 94.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7495476 - NM_004860 FXR2 1 2.56 2.1 61 5.51 78.11 24 7 Yes 62 0.51 No 23 0.85 Yes -23 0.88 Yes 47 91.2 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7495915 - NM_004860 FXR2 1 0.22 0.17 11 0.2 65.82 29 7 Yes 16 1.54 Yes 0 0 No -28 0.93 Yes 42 88.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 35647746 + NM_001164605 FXYD5 1 0.08 0.18 12 8.15 88.58 20 5.1 No 21 0.67 No 29 0.64 Yes -19 0.41 No 37 51.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 35648328 + NM_001164605 FXYD5 1 0.42 0.93 43 1.03 0 29 6.92 Yes 16 1.87 Yes 0 0 No -28 0.85 Yes 42 87.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 117691263 - NM_001204268 FXYD6-FXYD2 1 0.2 0.22 13 -3.42 70.79 20 5.1 No 7 -2.84 No 0 0 No -27 0.34 No 42 35.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 117691288 - NM_001204268 FXYD6-FXYD2 1 0.49 0.5 20 -3.13 55.14 39 6.16 Yes NA NA NA 0 0 No -32 0.33 No 56 34.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 117693263 - NM_001204268 FXYD6-FXYD2 1 8.67 5.64 53 2.82 76.13 35 7.88 Yes 22 0.56 No 0 0 No -50 0.5 No 20 44.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 45969536 - NM_024513 FYCO1 1 5.95 0.76 31 4.08 73.97 36 5.23 No 16 1.59 Yes 0 0 No -28 0.57 No 35 68.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 46006068 - NM_024513 FYCO1 1 0.89 0.13 9 5.63 74.87 22 5.83 Yes 37 -3.26 No 0 0 No -21 0.92 Yes 49 93.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 46026728 - NM_024513 FYCO1 1 9.43 1.06 33 6.6 77.56 14 4.47 No 1 1.05 Yes 0 0 No -28 0.5 No 42 37.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 197490320 + NR_027840 FYTTD1 1 0.13 0.4 22 4.73 87.46 14 5.2 No 36 0.24 No 23 0.83 Yes -26 0.16 No 49 14.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 197490336 + NR_027840 FYTTD1 1 1.43 4.32 71 3.19 72.53 24 4.4 No -4 0.35 No 23 0.83 Yes -23 0.81 Yes 47 78.39 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 197495688 + NR_027840 FYTTD1 1 0.2 0.69 33 7.28 87.79 34 5.93 Yes 47 0.62 No 0 0 No -37 0.44 No 36 55.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 197497024 + NR_027840 FYTTD1 1 0.21 0.72 36 2.27 76.62 12 4.9 No 34 0.91 Yes 0 0 No -46 0.33 No 24 51.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 197500300 + NR_027840 FYTTD1 1 0.03 0.14 9 2.47 83.3 23 4.69 No -2 0.03 No 0 0 No -22 0.63 No 50 58.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 197505260 + NR_027840 FYTTD1 1 1.52 5.38 72 1.48 71.91 34 7.35 Yes 63 1.23 Yes 0 0 No -33 0.91 Yes 37 91.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 197508685 + NR_027840 FYTTD1 1 1.25 3.42 67 6.63 0 47 7.8 Yes 34 1.52 Yes 42 0.64 Yes -46 0.91 Yes 24 92.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 28376641 + NM_145866 FZD3 1 2.06 0.75 38 4.39 80.19 32 6.45 Yes 19 1.28 Yes 0 0 No -31 0.69 Yes 39 85.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28394409 + NM_145866 FZD3 1 1.65 0.32 18 8.33 92.67 22 4.98 No 9 1.26 Yes 0 0 No -21 0.9 Yes 49 94.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28403060 + NM_145866 FZD3 1 0.92 0.17 8 8.27 84.36 23 3.65 No 10 0.78 Yes 0 0 No -22 0.94 Yes 48 89.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28411684 + NM_145866 FZD3 1 0.64 0.13 9 2.75 74.38 23 5 No 66 0.98 Yes 0 0 No -22 0.91 Yes 48 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3508222 + NM_016263 FZR1 1 0.46 0.13 9 4.74 84.41 31 7.28 Yes 18 1.35 Yes 0 0 No -34 0.82 Yes 36 90.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3510155 + NM_016263 FZR1 1 0.49 0.11 7 5.78 82.94 32 8.12 Yes 19 1.71 Yes 0 0 No -31 0.91 Yes 39 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3524407 + NM_016263 FZR1 1 1.89 1.21 47 9.18 79.86 23 6.08 Yes 60 -2.51 No 0 0 No -20 0.55 No 50 71.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 3527632 + NM_016263 FZR1 1 0.23 0.14 9 -0.96 0 32 7.1 Yes 19 0.52 No 0 0 No -31 0.86 Yes 39 79.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3531573 + NM_016263 FZR1 1 0.3 0.14 7 5.52 81.66 26 5.58 Yes 13 0.52 No 0 0 No -25 0.88 Yes 45 91.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3532574 + NM_016263 FZR1 1 0.46 0.24 14 1.46 69.11 34 6.71 Yes 21 1.68 Yes 33 0.93 Yes -33 0.84 Yes 37 89.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 3533484 + NM_016263 FZR1 1 0.81 0.38 21 10.57 83.58 31 5.37 No 73 -3.39 No 0 0 No -23 0.61 No 47 73.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 3534824 + NM_016263 FZR1 1 0.33 0.21 14 6.02 82.55 15 6.13 Yes 2 1.11 Yes 0 0 No -34 0.75 Yes 36 58.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 31059737 + NM_001308097 G2E3 1 0.59 0.29 19 1.6 62.91 59 6.43 Yes 41 1.49 Yes 29 0.39 Yes -58 0.71 Yes 12 76.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 31060901 + NM_001308097 G2E3 1 0.33 0.18 11 6.33 80.99 28 7.36 Yes 69 0.93 Yes 0 0 No -28 0.87 Yes 42 89.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31067305 + NM_001308097 G2E3 1 1.72 0.61 34 6.68 0 17 4.58 No 67 1.48 Yes 24 0.74 Yes -19 0.69 Yes 51 62.59 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 151166163 + NM_005754 G3BP1 1 31.49 193.68 72 11.68 95.02 17 6.32 Yes 4 1.19 Yes 25 0.32 Yes -25 0.7 Yes 45 78.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 151166428 + NM_005754 G3BP1 1 0.07 0.49 24 -0.68 0 37 6.8 Yes 65 1.12 Yes 0 0 No -40 0.55 No 34 57.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 151167325 + NM_005754 G3BP1 1 0.03 0.21 12 4.14 71.71 26 5.02 No 1 0.08 No 25 0.6 Yes -34 0.67 Yes 45 68.58 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 151171605 + NM_005754 G3BP1 1 0.05 0.32 20 6.3 80.07 20 7.1 Yes 7 0.11 No 19 0.78 Yes -19 0.86 Yes 51 84.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 151175041 + NM_005754 G3BP1 1 0.02 0.11 7 -2.31 77.72 29 4.88 No 76 0.77 No 0 0 No -23 0.51 No 37 38.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 151175041 + NM_005754 G3BP1 1 0.04 0.29 16 -2.31 77.72 29 4.88 No 76 0.77 No 0 0 No -23 0.51 No 37 38.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 151176757 + NM_005754 G3BP1 1 0.02 0.19 11 -0.13 64.5 35 6.08 Yes 53 1.83 Yes 26 0.47 Yes -34 0.54 No 36 67.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 151176849 + NM_005754 G3BP1 1 0.01 0.13 7 1.17 72.08 25 4.84 No 76 0.55 No 0 0 No -23 0.68 Yes 46 46.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 151179459 + NM_005754 G3BP1 1 0.02 0.22 15 -0.98 0 13 4.36 No 14 0.57 No 0 0 No -26 0.83 Yes 44 81.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 151183098 + NM_005754 G3BP1 1 0.1 0.89 38 6.29 88.53 27 5.2 No 39 0.92 Yes 0 0 No -26 0.53 No 44 65.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 76572366 - NM_203504 G3BP2 1 0.02 0.13 8 4.5 67.06 31 5.55 No 39 0.51 No 26 0.74 Yes -30 0.42 No 40 54.15 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 76579266 - NM_203504 G3BP2 1 7.32 56.28 72 8.79 92.93 23 5.39 No 76 -1.47 No 27 0.52 Yes -27 0.75 Yes 43 79.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 76581049 - NM_203504 G3BP2 1 0.04 0.19 12 -1.27 0 9 3.87 No 60 -4.65 No 0 0 No -36 0.47 No 33 54.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 76581079 - NM_203504 G3BP2 1 0.04 0.26 9 -1 69.67 18 4.8 No 30 -3.97 No 30 0.41 Yes -51 0.38 No 53 28.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 76583078 - NM_203504 G3BP2 1 0.07 0.39 25 10.21 88.23 14 5.48 No 1 0.61 No 0 0 No -25 0.75 Yes 45 67.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 76587258 - NM_203504 G3BP2 1 0.32 0.97 47 0.46 74.38 22 3.52 No 0 0.62 No 0 0 No -21 0.68 Yes 49 69.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 76587710 - NM_203504 G3BP2 1 0.23 0.71 32 3.54 80.79 21 3.51 No 28 0.83 Yes 20 0.76 Yes -20 0.76 Yes 50 50.66 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 76588026 - NM_203504 G3BP2 1 0.04 0.13 7 12.5 84.77 28 6.32 Yes 15 0.76 No 0 0 No -28 0.75 Yes 42 83.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42152051 + NR_028582 G6PC3 1 0.41 0.65 34 -3.1 0 32 5.66 Yes 64 -1.85 No 0 0 No -31 0.94 Yes 39 96.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42152433 + NR_028582 G6PC3 1 0.13 0.14 8 7.42 91.41 25 4.98 No 53 0.08 No 0 0 No -24 0.92 Yes 46 87.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42152654 + NR_028582 G6PC3 1 0.1 0.14 7 1.42 0 14 4.47 No 63 0.7 No 26 0.79 Yes -19 0.56 No 23 45.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 42152643 + NR_028582 G6PC3 1 0.63 0.79 37 0.83 76.85 11 4.8 No 52 0.7 No 26 0.79 Yes -36 0.76 Yes 34 70.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42152654 + NR_028582 G6PC3 1 0.15 0.19 11 1.42 0 14 4.47 No 63 0.7 No 26 0.79 Yes -19 0.56 No 23 45.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153761857 - NM_001042351 G6PD 1 0.07 0.1 7 2.26 77.31 22 4.9 No 45 0.43 No 0 0 No -21 0.77 Yes 49 49.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153762715 - NM_001042351 G6PD 1 7.94 11.9 72 0.51 75.26 21 4.8 No 42 1.53 Yes 20 0.95 Yes -20 0.92 Yes 50 70 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 144361253 + NM_002039 GAB1 1 0.62 0.17 8 0.58 68.81 17 5.16 No 53 0.51 No 0 0 No -24 0.55 No 48 38.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 144378832 + NM_002039 GAB1 1 16.93 2.83 65 8.74 83.04 26 5.27 No 13 0.02 No 25 0.85 Yes -25 0.89 Yes 45 90.77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 144387269 + NM_002039 GAB1 1 0.56 0.1 7 2.77 79.96 17 4.8 No 32 1.83 Yes 30 0.9 Yes -24 0.67 Yes 46 79.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7144989 - NM_007278 GABARAP 1 0.03 0.17 11 -6.8 0 16 4.29 No 17 1.22 Yes 0 0 No -29 0.52 No 41 75.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7144992 - NM_007278 GABARAP 1 0.04 0.26 15 -5.98 0 13 3.95 No 14 1.24 Yes 0 0 No -26 0.54 No 44 82.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 75611052 + NM_007285 GABARAPL2 1 0.03 0.18 12 9.09 83.24 37 7.57 Yes 24 0.69 No 0 0 No -36 0.49 No 34 60.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 27132343 + NM_001197297 GABPA 1 0.55 0.72 36 8.39 84.94 36 6.31 Yes 76 0.29 No 0 0 No -35 0.71 Yes 35 54.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 27139746 + NM_001197297 GABPA 1 0.32 0.29 15 10.68 88 32 5.66 Yes 71 -5.07 No 0 0 No -25 0.58 No 45 80.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 50574589 - NM_005254 GABPB1 1 0.52 0.47 24 7.88 86.09 28 5.73 Yes 15 1.08 Yes 27 0.84 Yes -27 0.85 Yes 43 80.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 50581863 - NM_005254 GABPB1 1 4.39 6.14 72 5.59 83.36 27 5.74 Yes 14 1.37 Yes 23 0.82 Yes -26 0.73 Yes 44 86.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 50601466 - NM_005254 GABPB1 1 0.52 0.76 30 3.89 73.67 34 6.43 Yes 37 0.13 No 0 0 No -33 0.66 No 37 62.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151045514 + NM_144618 GABPB2 1 4.76 1.1 42 9.92 88.27 17 5.37 No 36 1.01 Yes 26 0.66 Yes -38 0.77 Yes 32 81.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 151060627 + NM_144618 GABPB2 1 0.73 0.18 10 -3.21 75.82 34 7 Yes 50 -2.76 No 31 0.22 Yes -33 0.84 Yes 37 76.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 151060633 + NM_144618 GABPB2 1 11.48 2.67 63 0.8 0 16 3.87 No 56 -2.76 No 31 0.22 Yes -39 0.84 Yes 31 69.11 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 151060945 + NM_144618 GABPB2 1 4.56 1.6 60 9.91 85.14 27 5.76 Yes 69 1.09 Yes 26 0.86 Yes -31 0.76 Yes 39 83.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 151062933 + NM_144618 GABPB2 1 1.68 0.61 34 5.53 85.74 22 5.72 Yes 58 0.44 No 0 0 No -21 0.86 Yes 49 72.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 151079997 + NM_144618 GABPB2 1 0.32 0.13 8 10.45 95.16 29 7.21 Yes 16 1.85 Yes 0 0 No -28 0.88 Yes 42 94.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151089890 + NM_144618 GABPB2 1 0.4 0.13 8 2.69 68.63 19 4.27 No 6 0.55 No 0 0 No -18 0.39 No 52 57.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 68152102 + NM_001924 GADD45A 1 0.09 0.21 13 4.35 80.59 21 3.35 No 47 -2.52 No 0 0 No -20 0.44 No 57 35.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 68152123 + NM_001924 GADD45A 1 1.17 2.15 54 6.19 82.39 13 4.21 No 68 -2.24 No 0 0 No -23 0.63 No 36 38.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 13066072 - NM_052850 GADD45GIP1 1 0.06 0.17 9 6.73 92.48 14 5 No 55 0.83 Yes 0 0 No -22 0.36 No 48 37.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 844198 - NM_005255 GAK 1 0.26 0.43 23 8.42 85.76 21 6.71 Yes 8 1.1 Yes 20 0.85 Yes -20 0.83 Yes 50 64.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 844806 - NM_005255 GAK 1 2.77 3.01 64 6.28 91.79 17 4.47 No 52 -1.88 No 20 0.67 Yes -19 0.63 No 51 84.89 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 844890 - NM_005255 GAK 1 0.35 0.33 17 -1.8 40.73 14 5.65 Yes 22 0.35 No 30 0.4 Yes -25 0.45 No 57 27.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 853282 - NM_005255 GAK 1 1.21 1.56 58 3.99 74.9 25 5.47 No 32 0.51 No 24 0.72 Yes -24 0.72 Yes 46 77.74 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 859282 - NM_005255 GAK 1 0.31 0.42 16 1.2 62.92 29 6.86 Yes 68 -6.79 No 0 0 No -28 0.89 Yes 42 88.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 860290 - NM_005255 GAK 1 38.78 30.24 72 10.3 90.38 31 6.48 Yes 18 2.25 Yes 30 0.95 Yes -30 0.83 Yes 40 90.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 860365 - NM_005255 GAK 1 0.13 0.11 8 8.48 95.23 30 5.39 No 17 1.23 Yes 30 0.89 Yes -24 0.73 Yes 41 87.49 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 861218 - NM_005255 GAK 1 0.43 0.47 23 -0.16 76.72 35 6.16 Yes 22 0.6 No 0 0 No -34 0.95 Yes 36 89.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 869042 - NM_005255 GAK 1 0.12 0.21 12 2.84 83 29 10.12 Yes 57 1.4 Yes 0 0 No -28 0.5 No 32 41.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 871267 - NM_005255 GAK 1 0.75 0.97 44 7.3 76.62 37 6.56 Yes 24 -1.53 No 0 0 No -36 0.55 No 50 48.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 874216 - NM_005255 GAK 1 0.3 0.35 22 11.74 90.61 23 5.39 No 61 -3.1 No 0 0 No -22 0.53 No 44 62.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 875982 - NM_005255 GAK 1 0.09 0.14 10 7.34 91.01 34 6.32 Yes 21 0.39 No 0 0 No -33 0.84 Yes 37 82.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 877234 - NM_005255 GAK 1 0.1 0.15 10 4.08 81.71 17 5.19 No 27 1.95 Yes 0 0 No -39 0.49 No 50 32.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 883442 - NM_005255 GAK 1 0.2 0.15 11 8.06 86.98 29 6.26 Yes 64 2.75 Yes 0 0 No -28 0.93 Yes 42 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 887376 - NM_005255 GAK 1 1.07 1.35 55 2.64 67.67 72 6.99 Yes 59 1.25 Yes 0 0 No -19 0.59 No 51 81.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 890644 - NM_005255 GAK 1 0.28 0.42 22 3.22 81.46 19 5 No 6 0.21 No 0 0 No -23 0.58 No 47 60.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 890711 - NM_005255 GAK 1 0.07 0.11 8 3.59 77.79 29 6.71 Yes 73 -2.35 No 0 0 No -28 0.93 Yes 42 92.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 890929 - NM_005255 GAK 1 0.15 0.24 16 9.38 85.15 16 5.29 No 3 1.07 Yes 0 0 No -25 0.66 No 55 68.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 891570 - NM_005255 GAK 1 0.1 0.17 10 6.36 84.47 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.78 Yes 51 89.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 898563 - NM_005255 GAK 1 1.44 1.78 52 3.01 0 24 4.6 No 5 0.27 No 21 0.49 Yes -23 0.59 No 47 77.2 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 898563 - NM_005255 GAK 1 0.13 0.17 10 3.01 0 24 4.6 No 5 0.27 No 21 0.49 Yes -23 0.59 No 47 77.2 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 905570 - NM_005255 GAK 1 0.12 0.18 9 -11.99 0 14 3.87 No 73 0.75 No 0 0 No -21 0.51 No 24 52.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 905579 - NM_005255 GAK 1 0.1 0.13 9 -15.74 0 13 4 No 64 0.76 No 32 0.45 Yes -12 0.77 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 905963 - NM_005255 GAK 1 0.57 0.83 37 9.64 79.53 28 5.83 Yes 15 1.25 Yes 27 0.89 Yes -27 0.73 Yes 43 79.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 905963 - NM_005255 GAK 1 0.1 0.15 8 9.64 79.53 28 5.83 Yes 15 1.25 Yes 27 0.89 Yes -27 0.73 Yes 43 79.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 917034 - NM_005255 GAK 1 0.17 0.19 13 4.02 0 19 3.1 No 46 0.86 Yes 0 0 No -31 0.45 No 29 52.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 88447792 - NM_000153 GALC 1 2.27 0.26 16 11.65 89.29 21 7.03 Yes 8 0.82 Yes 26 0.7 Yes -26 0.53 No 44 56.75 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 88453401 - NM_000153 GALC 1 0.58 0.15 9 1.01 76.23 39 7.87 Yes 26 1.25 Yes 38 0.77 Yes -38 0.93 Yes 32 96.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 24123598 - NM_001008216 GALE 1 1.16 0.78 36 8.65 89.28 16 5.52 No 43 1.82 Yes 18 0.66 Yes -29 0.56 No 41 35.69 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 24124716 - NM_001008216 GALE 1 0.9 0.47 27 -0.73 0 31 6.39 Yes 70 -3.75 No 26 0.6 Yes -31 0.8 Yes 39 50.15 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 24124975 - NM_001008216 GALE 1 0.4 0.21 14 5.56 83.33 18 4.55 No 5 0.57 No 0 0 No -26 0.86 Yes 44 87.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73754428 - NM_000154 GALK1 1 0.44 0.17 10 -6.11 0 16 4.01 No 3 -1.32 No 0 0 No -50 0.3 No 20 28.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73758877 - NM_000154 GALK1 1 0.33 0.14 10 4.46 82.21 26 7.36 Yes 13 1.84 Yes 25 0.91 Yes -25 0.6 No 45 59.94 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 73759263 - NM_000154 GALK1 1 0.24 0.14 10 5.48 78.98 23 5.06 No 10 0.66 No 26 0.83 Yes -26 0.7 Yes 44 78.83 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 49509434 + NM_001289030 GALK2 1 0.23 0.14 7 7.71 75.93 34 6.71 Yes 63 0.12 No 0 0 No -33 0.76 Yes 37 79.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 49517401 + NM_001289030 GALK2 1 1.62 1.43 48 10.92 88.3 24 7.13 Yes 11 1.87 Yes 23 0.92 Yes -23 0.86 Yes 47 89.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 49527821 + NM_001289030 GALK2 1 0.15 0.14 9 11.83 91.01 28 6.33 Yes 15 0.78 Yes 27 0.69 Yes -21 0.48 No 43 38.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 49600804 + NM_001289030 GALK2 1 4.53 2.38 60 3.92 74.04 47 7.53 Yes 34 0.3 No 0 0 No -30 0.39 No 31 64.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 49610307 + NM_001289030 GALK2 1 3.29 1.74 62 13.42 85.91 28 5.28 No 15 0.65 No 21 0.69 Yes -21 0.8 Yes 49 74.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 49611085 + NM_001289030 GALK2 1 2.04 1.08 43 10.56 96.24 27 5.74 Yes 76 1.68 Yes 0 0 No -26 0.85 Yes 44 68.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 49611168 + NM_001289030 GALK2 1 2.3 1.15 47 3.52 84.41 43 4.65 No 41 0.27 No 32 0.48 Yes -32 0.69 Yes 38 74.02 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 49620152 + NM_001289030 GALK2 1 1.05 0.4 20 -2.91 0 29 6.48 Yes 16 1.53 Yes 0 0 No -28 0.79 Yes 42 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 38925507 + NM_138801 GALM 1 4.7 0.76 31 11.16 84.6 30 5.83 Yes 17 1.31 Yes 29 0.93 Yes -29 0.96 Yes 41 98.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88883826 - NM_000512 GALNS 1 15.12 1.29 48 6.49 77.7 14 5.08 No 1 1.1 Yes 0 0 No -20 0.78 Yes 50 64.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 88893127 - NM_000512 GALNS 1 0.65 0.13 8 10.31 86.13 33 6.92 Yes 20 1.27 Yes 0 0 No -32 0.7 Yes 38 77.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 33239821 + NM_020474 GALNT1 1 0.82 1.5 56 4.71 87.35 17 4.25 No 4 0.65 No 23 0.76 Yes -23 0.77 Yes 47 72.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 33243574 + NM_020474 GALNT1 1 0.06 0.13 8 -4.76 0 37 4.39 No 65 -4.87 No 24 0.72 Yes -32 0.35 No 49 26.85 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 33243597 + NM_020474 GALNT1 1 0.12 0.21 11 2.91 0 15 3.79 No 23 0.48 No 0 0 No -30 0.61 No 40 42.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 33269910 + NM_020474 GALNT1 1 0.04 0.11 8 6 84.64 14 5 No 1 1.13 Yes 0 0 No -26 0.4 No 44 47.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 33289571 + NM_020474 GALNT1 1 0.14 0.39 22 5.54 70.78 41 6.32 Yes 28 1.3 Yes 24 0.85 Yes -40 0.6 No 37 69.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 153577511 + NM_198321 GALNT10 1 0.36 0.15 8 6.64 79.55 30 6.38 Yes 17 1.13 Yes 0 0 No -29 0.79 Yes 41 68.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 153597588 + NM_198321 GALNT10 1 11.77 5.24 72 9.61 87.68 38 7.21 Yes 59 -1.89 No 0 0 No -32 0.68 Yes 38 74.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 153674792 + NM_198321 GALNT10 1 0.24 0.25 15 9.64 91.79 32 5.25 No 19 0.58 No 0 0 No -31 0.92 Yes 39 95.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 153697598 + NM_198321 GALNT10 1 0.57 1.14 50 8.59 93.35 26 5.13 No 13 0.46 No 0 0 No -25 0.96 Yes 45 94.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 153704061 + NM_198321 GALNT10 1 0.13 0.26 18 12.02 91.34 30 6.9 Yes 17 1.78 Yes 0 0 No -29 0.93 Yes 41 96.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 153759987 + NM_198321 GALNT10 1 1.81 2.71 66 7.51 79.79 32 6.16 Yes 19 0.63 No 24 0.91 Yes -31 0.73 Yes 39 81.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 153799707 + NM_198321 GALNT10 1 0.12 0.14 10 10.99 87.7 15 5.64 Yes 2 0.93 Yes 0 0 No -18 0.51 No 52 67.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 153786657 + NM_198321 GALNT10 1 0.35 0.21 10 3.46 64.39 41 6.83 Yes 19 1.19 Yes 0 0 No -31 0.35 No 30 78.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 153792051 + NM_198321 GALNT10 1 0.22 0.15 8 9.24 86.4 15 5.27 No 2 0.59 No 23 0.58 Yes -23 0.71 Yes 47 69.36 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 151724681 + NM_022087 GALNT11 1 37.62 2.61 60 -5.88 0 18 4.47 No 27 -3.07 No 22 0.52 Yes -17 0.75 Yes 53 70.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 151724695 + NM_022087 GALNT11 1 1.93 0.15 9 3.48 85.39 19 4.8 No 41 -3.07 No 0 0 No -18 0.54 No 52 38.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151724754 + NM_022087 GALNT11 1 6.92 0.49 26 4.06 88.78 28 6.52 Yes 31 0.24 No 0 0 No -27 0.57 No 43 55.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151791404 + NM_022087 GALNT11 1 6.47 0.4 24 6.63 84.23 14 6.08 Yes 35 -1.14 No 32 0.35 Yes -30 0.42 No 38 87.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 151805125 + NM_022087 GALNT11 1 1.58 0.33 17 -8.48 73.54 27 5.74 Yes 14 1.34 Yes 0 0 No -26 0.87 Yes 44 92.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151813988 + NM_022087 GALNT11 1 2.56 0.67 27 2.42 63.51 48 6.93 Yes 13 0.24 No 25 0.64 Yes -25 0.49 No 23 58.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 230397467 + NM_001291866 GALNT2 1 0.32 0.5 24 10.01 86.37 26 4.15 No 49 -1.99 No 0 0 No -20 0.43 No 50 52.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 230398643 + NM_001291866 GALNT2 1 0.06 0.1 7 3.36 68.82 24 5.2 No 24 0.26 No 30 0.83 Yes -23 0.48 No 47 52.88 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 230399072 + NM_001291866 GALNT2 1 0.07 0.14 8 2.65 82.71 25 4.64 No 59 1.89 Yes 0 0 No -24 0.54 No 46 55.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 51752066 - NM_007210 GALNT6 1 0.55 0.14 10 3.52 67.74 50 7.48 Yes -4 0.52 No 22 0.92 Yes -37 0.52 No 33 31.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 51753068 - NM_007210 GALNT6 1 0.58 0.11 7 8.76 80.81 20 5.57 Yes 59 1.2 Yes 0 0 No -19 0.66 Yes 51 63.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 51762035 - NM_007210 GALNT6 1 1.3 0.17 9 5.93 79.44 59 7.49 Yes -4 0.42 No 0 0 No -46 0.62 No 24 71.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 51762118 - NM_007210 GALNT6 1 1.88 0.33 20 6.01 86.85 23 5 No 10 -0.54 No 0 0 No -20 0.66 No 50 74.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 174218945 + NM_017423 GALNT7 1 0.16 0.18 13 7.87 76.79 32 6.58 Yes 19 0.47 No 32 0.76 Yes -32 0.88 Yes 38 89.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 174218945 + NM_017423 GALNT7 1 7.82 8.29 72 7.87 76.79 32 6.58 Yes 19 0.47 No 32 0.76 Yes -32 0.88 Yes 38 89.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 174218971 + NM_017423 GALNT7 1 0.28 0.25 15 6.99 74.76 29 5.75 Yes 45 0.46 No 0 0 No -20 0.56 No 50 81.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 174223690 + NM_017423 GALNT7 1 0.11 0.13 7 8.53 85.16 26 5.29 No 13 1.77 Yes 0 0 No -25 0.95 Yes 45 95.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 174225439 + NM_017423 GALNT7 1 0.24 0.22 12 7.36 82.72 26 4.99 No 38 1.67 Yes 0 0 No -25 0.85 Yes 45 84.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 174237661 + NM_017423 GALNT7 1 0.07 0.1 7 8.57 85.29 36 7.37 Yes 23 1.37 Yes 0 0 No -31 0.7 Yes 39 74.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 34647117 + NM_000155 GALT 1 0.95 0.18 10 3.57 77.26 27 5.63 Yes 35 1.19 Yes 29 0.54 Yes -26 0.56 No 44 39.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 34647471 + NM_000155 GALT 1 1.33 0.29 19 -6.87 0 12 4.24 No -1 0.63 No 0 0 No -31 0.56 No 39 43.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 34647537 + NM_000155 GALT 1 3.37 0.69 34 1.33 70.88 16 5.33 No 65 0.74 No 28 0.51 Yes -31 0.52 No 42 66.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 34647740 + NM_000155 GALT 1 1.16 0.25 17 4.66 73.12 36 7.14 Yes 23 0.98 Yes 0 0 No -35 0.69 Yes 38 72.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 34648044 + NM_000155 GALT 1 7 1.74 59 9.83 94.15 19 5.39 No 6 1.28 Yes 18 0.56 Yes -18 0.66 No 52 80.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 34648088 + NM_000155 GALT 1 1.44 0.39 22 6.4 85.95 24 5.91 Yes 50 1.23 Yes 23 0.88 Yes -23 0.9 Yes 47 87.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 34649418 + NM_000155 GALT 1 3.76 0.83 38 3.65 0 15 4.58 No 56 1.49 Yes 0 0 No -54 0.55 No 16 74.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 34649958 + NM_000155 GALT 1 2.06 0.64 31 -0.09 67.26 37 7.54 Yes 24 0.62 No 0 0 No -29 0.57 No 41 62.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1399993 - NM_138924 GAMT 1 0.47 0.19 14 10 88.35 32 6.16 Yes NA NA NA 0 0 No -31 0.72 Yes 39 82.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62393630 - NM_001278193 GANAB 1 0.03 0.21 13 -1.42 0 17 4.1 No 73 2.18 Yes 0 0 No -31 0.62 No 35 72.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 62393633 - NM_001278193 GANAB 1 0.06 0.46 24 -0.48 0 83 10.1 Yes 70 2.18 Yes 0 0 No -32 0.65 No 42 72.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 62393913 - NM_001278193 GANAB 1 0.08 0.29 15 -1.31 0 10 4 No 17 2.2 Yes 0 0 No -29 0.93 Yes 41 95.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62396765 - NM_001278193 GANAB 1 0.05 0.19 12 -7.91 73.44 22 5.9 Yes 36 1.07 Yes 0 0 No -24 0.45 No 41 73.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 62400538 - NM_001278193 GANAB 1 0.05 0.18 10 7.1 92.11 32 6.71 Yes 47 1.26 Yes 0 0 No -31 0.56 No 39 41.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 62401040 - NM_001278193 GANAB 1 0.52 2.04 59 6.5 74.51 78 8.81 Yes 65 1.12 Yes 25 0.56 Yes -58 0.22 No 45 70.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 62401848 - NM_001278193 GANAB 1 13.19 51.58 72 6.88 81.13 75 8.51 Yes 62 1.42 Yes 21 0.58 Yes -21 0.3 No 49 47.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 42570222 + NM_198141 GANC 1 0.34 0.17 10 9.71 84.62 25 6.32 Yes 12 1.69 Yes 24 0.93 Yes -24 0.92 Yes 46 94.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 42570655 + NM_198141 GANC 1 0.7 0.35 19 -1.44 57.98 43 5.24 No 30 0.16 No 23 0.62 Yes -22 0.77 Yes 48 84.48 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 42573114 + NM_198141 GANC 1 0.45 0.24 12 2.23 81.66 19 5 No 6 -1.65 No 26 0.76 Yes -18 0.53 No 52 66.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 42575808 + NM_198141 GANC 1 0.37 0.17 11 11 92.73 34 6.7 Yes 43 0.88 Yes 23 0.74 Yes -23 0.75 Yes 47 63.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 42573114 + NM_198141 GANC 1 35.96 15.57 72 2.23 81.66 19 5 No 6 -1.65 No 26 0.76 Yes -18 0.53 No 52 66.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 42573119 + NM_198141 GANC 1 0.58 0.19 10 2.47 0 24 5.48 No 11 -1.98 No 0 0 No -23 0.61 No 47 66.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42575808 + NM_198141 GANC 1 6.15 2.82 61 11 92.73 34 6.7 Yes 43 0.88 Yes 23 0.74 Yes -23 0.75 Yes 47 63.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 42576283 + NM_198141 GANC 1 0.44 0.17 10 10.76 87.3 20 6.16 Yes 7 1.78 Yes 0 0 No -19 0.96 Yes 51 95.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42580906 + NM_198141 GANC 1 0.92 0.39 18 7.41 86.09 47 5.96 Yes 34 0.76 No 0 0 No -22 0.57 No 48 37.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42606079 + NM_198141 GANC 1 2.92 1.35 45 9.4 85.29 22 5.54 No 9 1.02 Yes 0 0 No -26 0.78 Yes 44 78.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42606277 + NM_198141 GANC 1 1.6 0.78 36 7.93 88.41 21 5 No 8 1.08 Yes 0 0 No -20 0.72 Yes 50 78.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42620045 + NM_198141 GANC 1 0.32 0.1 7 0 57.6 35 4.58 No 9 0.1 No 0 0 No -34 0.42 No 42 42.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42636625 + NM_198141 GANC 1 0.43 0.13 8 8.69 81.12 44 8.1 Yes 31 0.89 Yes 0 0 No -43 0.93 Yes 27 93.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42641513 + NM_198141 GANC 1 0.34 0.13 8 9.14 87.88 32 5.37 No 19 0.3 No 0 0 No -31 0.88 Yes 39 92.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6645903 + NM_001256799 GAPDH 1 0 0.44 22 -3.63 65.85 51 7.44 Yes 56 1.61 Yes 0 0 No -41 0.33 No 20 58.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6646052 + NM_001256799 GAPDH 1 0.01 0.79 40 0.5 0 20 7.55 Yes 7 1.91 Yes 38 0.57 Yes -19 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 6646278 + NM_001256799 GAPDH 1 0.02 1.67 54 2.45 0 9 4.58 No 22 1.22 Yes 0 0 No -37 0.67 Yes 33 69.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 6646756 + NM_001256799 GAPDH 1 0 0.32 19 -1.15 0 17 3.99 No 8 1.55 Yes 0 0 No -28 0.86 Yes 42 74.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6646779 + NM_001256799 GAPDH 1 0 0.33 21 1.53 77.92 13 5.64 Yes 31 1.52 Yes 0 0 No -25 0.57 No 45 61.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6646782 + NM_001256799 GAPDH 1 0 0.26 17 -3.24 65.66 16 5.9 Yes 34 1.52 Yes 0 0 No -23 0.53 No 16 52.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6646972 + NM_001256799 GAPDH 1 0 0.47 28 3.02 68.03 14 5.73 Yes 1 1.79 Yes 0 0 No -26 0.64 No 44 25.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6647087 + NM_001256799 GAPDH 1 0 0.65 31 7.66 79.54 32 5.66 Yes -2 0.89 Yes 0 0 No -31 0.69 Yes 42 68.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 6647290 + NM_001256799 GAPDH 1 0 0.78 36 2.84 75.74 20 5.68 Yes 33 1.62 Yes 0 0 No -45 0.55 No 25 82.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 128063369 + NM_001282681 GAPVD1 1 0.18 0.19 13 9.97 95.65 18 4.66 No 5 1.18 Yes 0 0 No -27 0.56 No 43 67.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 128066381 + NM_001282681 GAPVD1 1 0.24 0.18 12 3.67 84 15 4.86 No 2 1.5 Yes 0 0 No -24 0.8 Yes 46 58.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 128096872 + NM_001282681 GAPVD1 1 0.14 0.14 8 1.95 75.84 48 7.09 Yes 35 0.35 No 0 0 No -27 0.93 Yes 43 93.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 128097450 + NM_001282681 GAPVD1 1 5.69 5.39 72 -1.06 0 43 7.61 Yes 30 1.55 Yes 42 0.75 Yes -42 0.88 Yes 28 91.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128099637 + NM_001282681 GAPVD1 1 0.29 0.25 18 8.16 87.27 43 6.34 Yes -4 -1.43 No 0 0 No -29 0.51 No 42 62.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 128111716 + NM_001282681 GAPVD1 1 1.22 0.85 41 -0.5 62.94 31 5.67 Yes 6 0.21 No 0 0 No -23 0.53 No 40 55.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 128116917 + NM_001282681 GAPVD1 1 0.23 0.24 13 1.58 60.1 24 6.39 Yes 63 0.77 No 23 0.81 Yes -23 0.7 Yes 43 64.54 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 128117930 + NM_001282681 GAPVD1 1 0.2 0.19 11 -0.55 0 17 4.12 No 64 0.34 No 0 0 No -40 0.44 No 34 45.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 30635439 + NM_002047 GARS 1 2.18 7.29 72 5.52 71.35 42 8.64 Yes 34 1.18 Yes 41 0.8 Yes -41 0.92 Yes 29 97.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 30644605 + NM_002047 GARS 1 0.25 1.64 54 11.12 89.7 27 5.74 Yes 14 0.31 No 0 0 No -26 0.76 Yes 44 65.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 30645941 + NM_002047 GARS 1 0.12 0.68 30 10.8 86.44 40 6.98 Yes 27 1.41 Yes 0 0 No -30 0.83 Yes 40 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 30653060 + NM_002047 GARS 1 0.13 0.76 36 6.24 72.62 42 6.93 Yes 29 1.46 Yes 0 0 No -41 0.93 Yes 29 94.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 30653859 + NM_002047 GARS 1 0.03 0.17 11 8.07 85.86 26 5.03 No 13 0.9 Yes 37 0.48 Yes -25 0.89 Yes 45 96.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 30655513 + NM_002047 GARS 1 0.12 0.61 32 0.52 80.27 19 6.05 Yes 6 1.48 Yes 0 0 No -25 0.74 Yes 45 78.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 30656792 + NM_002047 GARS 1 0.09 0.4 19 4.23 76.9 31 6.52 Yes 38 0.53 No 0 0 No -30 0.86 Yes 40 71.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 30661935 + NM_002047 GARS 1 0.02 0.11 7 -9.65 0 16 6.16 Yes 3 1.01 Yes 28 0.59 Yes -31 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 30666672 + NM_002047 GARS 1 0.06 0.35 20 3.34 86.62 20 4.55 No 32 0.74 No 19 0.8 Yes -19 0.71 Yes 51 57.53 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 30668181 + NM_002047 GARS 1 0.02 0.11 8 -4.18 0 9 3.87 No 14 0.53 No 0 0 No -26 0.7 Yes 40 57.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 34903861 - NM_175085 GART 1 0.12 0.42 23 -15.94 64.8 53 7.42 Yes 40 0.57 No 0 0 No -34 0.51 No 18 75.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 34904758 - NM_175085 GART 1 0.05 0.14 9 3.49 0 27 7.53 Yes 14 1.25 Yes 0 0 No -26 0.92 Yes 44 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34911630 - NM_175085 GART 1 1.75 2.81 62 5.84 92.55 29 6.48 Yes 16 0.05 No 28 0.81 Yes -28 0.94 Yes 42 93.23 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 22700710 + NM_001143830 GAS2 1 0.33 0.24 13 1.87 81.97 26 4.99 No 13 0.64 No 0 0 No -25 0.6 No 50 86.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 22769368 + NM_001143830 GAS2 1 0.26 0.17 11 6.67 81.55 27 7.31 Yes 14 1.08 Yes 0 0 No -26 0.54 No 44 81.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 173833641 - NR_002578 GAS5 1 0.72 7.79 71 -0.87 0 34 7.21 Yes 68 -4.21 No 0 0 No -33 0.66 No 37 74.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 9820655 - NM_201432 GAS7 1 0.97 0.92 38 2.65 0 35 6.24 Yes 22 1.45 Yes 0 0 No -34 0.86 Yes 36 95.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 8105958 + NM_001002295 GATA3 1 26.11 2.69 63 4.38 84.71 32 4.39 No 19 1.22 Yes 28 0.82 Yes -23 0.8 Yes 39 74.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 8115709 + NM_001002295 GATA3 1 4.87 0.81 31 0.84 0 11 4.12 No 8 0.75 No 0 0 No -40 0.35 No 29 35.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 92078405 + NM_021167 GATAD1 1 2.73 1.4 55 11.7 85.89 26 4.65 No 32 1.42 Yes 0 0 No -28 0.44 No 45 60.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19584841 + NM_017660 GATAD2A 1 0.41 0.83 40 7.09 81.93 23 5.47 No 10 0.65 No 0 0 No -22 0.82 Yes 48 81.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19610934 + NM_017660 GATAD2A 1 4.07 0.49 24 1.74 0 29 5.77 Yes 16 1 Yes 0 0 No -28 0.91 Yes 42 86.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19611926 + NM_017660 GATAD2A 1 2313.15 230.26 72 9.91 87.17 29 5.47 No 36 2.19 Yes 28 0.87 Yes -28 0.9 Yes 42 88.44 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 19616129 + NM_017660 GATAD2A 1 0.59 0.86 38 -3.11 0 17 4.47 No 4 1.36 Yes 25 0.92 Yes -16 0.92 Yes 54 91.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 153786427 - NM_020699 GATAD2B 1 0.43 0.63 31 4.66 87.46 21 5.13 No 8 1.19 Yes 0 0 No -20 0.74 Yes 50 74.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153788990 - NM_020699 GATAD2B 1 0.3 0.33 19 6.48 85.39 22 7.53 Yes 75 0.79 Yes 0 0 No -24 0.73 Yes 46 61.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 153789062 - NM_020699 GATAD2B 1 4.68 5.26 71 4.46 81.26 27 6.43 Yes 14 1.64 Yes 0 0 No -26 0.95 Yes 44 89.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153825897 - NM_020699 GATAD2B 1 0.14 0.1 7 9.63 97.49 15 5.21 No 2 0.95 Yes 0 0 No -28 0.93 Yes 42 95.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153865916 - NM_020699 GATAD2B 1 0.54 0.4 24 9.91 86.62 22 5.74 Yes 9 1.79 Yes 0 0 No -21 0.87 Yes 49 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153871459 - NM_020699 GATAD2B 1 0.2 0.14 9 4.72 85.42 32 4.98 No 19 0.99 Yes 0 0 No -31 0.47 No 39 65.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 153872889 - NM_020699 GATAD2B 1 2.34 1.88 60 3.53 83.95 33 6.16 Yes 20 1.19 Yes 0 0 No -32 0.82 Yes 38 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 152602982 - NM_004564 GATB 1 0.15 0.13 8 5.89 77.72 32 6 Yes 19 0.77 Yes 0 0 No -31 0.51 No 39 66.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 152622609 - NM_004564 GATB 1 0.43 0.36 20 10.48 89.43 59 7.34 Yes 76 0.15 No 24 0.71 Yes -24 0.61 No 46 67.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 152624453 - NM_004564 GATB 1 0.85 0.69 36 1.55 0 35 6.14 Yes 18 0.6 No 0 0 No -34 0.56 No 36 71.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 152638154 - NM_004564 GATB 1 0.25 0.25 17 5.73 82.48 20 5.41 No 46 -3.24 No 25 0.53 Yes -19 0.73 Yes 51 71.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 152638223 - NM_004564 GATB 1 0.23 0.22 13 1.34 0 33 6.54 Yes 20 1.06 Yes 0 0 No -29 0.59 No 41 81.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 152643368 - NM_004564 GATB 1 3.82 3.17 65 7.91 95.2 18 4.14 No 30 0.63 No 28 0.37 Yes -24 0.58 No 48 58.96 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 152643941 - NM_004564 GATB 1 0.29 0.24 12 5.96 83.71 23 6.31 Yes 51 1.02 Yes 0 0 No -22 0.88 Yes 48 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120897857 + NR_033684 GATC 1 0.16 0.18 12 9.14 86.37 20 6.15 Yes 7 1.89 Yes 0 0 No -19 0.68 Yes 51 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 45653925 - NM_001321015 GATM 1 0.15 0.28 16 10.45 82.44 28 7.24 Yes 15 1.79 Yes 0 0 No -27 0.65 No 43 84.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 45655980 - NM_001321015 GATM 1 0.13 0.18 13 7.75 83.82 23 7.14 Yes 10 1.13 Yes 0 0 No -22 0.88 Yes 48 91.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 45656161 - NM_001321015 GATM 1 0.07 0.13 7 5.26 72.86 36 7.01 Yes 62 0.76 No 0 0 No -35 0.64 No 35 79.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 30681893 - NM_001037666 GATSL3 1 1.04 0.14 10 2.73 70.47 21 5.07 No 8 -1.5 No 0 0 No -25 0.48 No 21 45.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 30682941 - NM_001037666 GATSL3 1 17.46 2.26 60 7.21 84.28 20 6.67 Yes 7 1.02 Yes 19 0.64 Yes -19 0.86 Yes 51 88.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155204913 - NM_001171811 GBA 1 0.14 0.14 9 -0.64 72.91 11 4.8 No -2 0.25 No 23 0.91 Yes -39 0.62 No 31 28.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 35737602 - NM_020944 GBA2 1 0.85 0.56 28 6.73 75.29 34 6.24 Yes 47 1.02 Yes 24 0.4 Yes -34 0.74 Yes 36 74.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 35738267 - NM_020944 GBA2 1 6.04 2.44 67 5.76 86.88 20 5.1 No 53 0.25 No 0 0 No -22 0.45 No 48 51.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 35738402 - NM_020944 GBA2 1 0.92 0.38 20 -11.7 0 10 3.17 No 32 1.33 Yes 26 0.96 Yes -40 0.76 Yes 30 72.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 35738415 - NM_020944 GBA2 1 0.31 0.13 8 -2.33 58.3 32 6.39 Yes 19 1.32 Yes 26 0.96 Yes -27 0.79 Yes 43 80.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 35738919 - NM_020944 GBA2 1 1.79 1.24 50 -7.61 0 17 4.24 No 33 1.31 Yes 25 0.94 Yes -45 0.84 Yes 25 71.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 35741054 - NM_020944 GBA2 1 0.35 0.24 15 -7.49 0 11 4.12 No 11 1.49 Yes 0 0 No -29 0.81 Yes 41 72.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35741057 - NM_020944 GBA2 1 2.65 1.9 57 -0.11 0 21 5.66 Yes 8 1.47 Yes 0 0 No -26 0.81 Yes 44 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35741906 - NM_020944 GBA2 1 5.17 2.04 57 5.4 83.38 34 6.13 Yes 0 0.4 No 33 0.5 Yes -33 0.94 Yes 37 96.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 35743324 - NM_020944 GBA2 1 12.15 4.65 70 10.15 88.87 16 5.81 Yes 3 0.15 No 24 0.67 Yes -33 0.54 No 49 63.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 56047452 + NM_001483 GBAS 1 0.08 0.13 9 6.16 77.65 30 6.54 Yes 17 0.7 No 32 0.86 Yes -32 0.91 Yes 38 73.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 56051441 + NM_001483 GBAS 1 0.18 0.19 12 -0.88 67.67 26 4.42 No 13 0.35 No 0 0 No -29 0.65 No 41 74.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 56052504 + NM_001483 GBAS 1 0.51 0.64 25 8.89 94.37 49 7.48 Yes 36 1.25 Yes 27 0.94 Yes -24 0.76 Yes 46 80.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 56059520 + NM_001483 GBAS 1 0.52 0.74 35 6.16 77.98 22 5.77 Yes 9 0.22 No 28 0.65 Yes -25 0.71 Yes 45 88.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 56065065 + NM_001483 GBAS 1 0.36 0.58 27 -0.27 0 17 3.77 No 20 0.75 No 0 0 No -32 0.89 Yes 38 88.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 81629238 - NM_000158 GBE1 1 0.49 0.82 39 9.98 90.51 27 5.35 No 14 0.47 No 0 0 No -26 0.77 Yes 44 87.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 81647017 - NM_000158 GBE1 1 0.07 0.13 8 6.01 90.45 40 8.51 Yes 27 0.56 No 0 0 No -26 0.63 No 44 77.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 81657851 - NM_000158 GBE1 1 0.2 0.36 20 6.97 90.61 29 5.39 No 16 0.28 No 0 0 No -28 0.52 No 46 48.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 81695656 - NM_000158 GBE1 1 0.27 0.6 33 5.75 74.12 32 6.48 Yes 19 0.54 No 31 0.43 Yes -19 0.47 No 39 55.34 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 81699069 - NM_000158 GBE1 1 0.05 0.13 8 0.19 0 25 6.14 Yes 12 1.12 Yes 27 0.43 Yes -24 0.5 No 46 52.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 81704153 - NM_000158 GBE1 1 3.19 6.64 71 9.95 90.49 14 6.38 Yes 1 1.5 Yes 29 0.66 Yes -29 0.7 Yes 41 72.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 81704207 - NM_000158 GBE1 1 0.43 0.79 29 5.59 74.48 32 5.34 No 4 -2.63 No 0 0 No -31 0.67 Yes 39 54.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 81749269 - NM_000158 GBE1 1 0.05 0.13 7 6.24 80.68 35 5.62 Yes 1 0.32 No 0 0 No -35 0.73 Yes 35 64.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 81802432 - NM_000158 GBE1 1 0.19 0.35 20 5.68 89.29 34 5.77 Yes 7 1.13 Yes 0 0 No -33 0.83 Yes 37 93.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 81803148 - NM_000158 GBE1 1 0.39 0.71 36 10.47 90.41 22 5.83 Yes 9 1.28 Yes 0 0 No -21 0.92 Yes 49 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 81809648 - NM_000158 GBE1 1 0.1 0.22 15 8.74 86.66 20 3.89 No 23 0.45 No 0 0 No -24 0.76 Yes 46 66.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104037169 + NM_001199378 GBF1 1 0.43 0.75 38 11.46 95.65 23 6.73 Yes 10 1.55 Yes 0 0 No -28 0.4 No 42 59.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 104092164 + NM_001199378 GBF1 1 1.12 2.01 61 8.59 88.56 28 6.77 Yes 15 1.03 Yes 0 0 No -28 0.61 No 36 55.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 104095319 + NM_001199378 GBF1 1 0.07 0.11 7 6.12 81.38 20 5.1 No 49 0.39 No 0 0 No -24 0.74 Yes 46 78.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 104114126 + NM_001199378 GBF1 1 0.26 0.44 23 10.93 86.51 28 6.13 Yes 32 0.89 Yes 0 0 No -34 0.51 No 36 52.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 104119026 + NM_001199378 GBF1 1 876.06 124.88 72 2.72 77.35 40 7.71 Yes 27 1.38 Yes 39 0.79 Yes -39 0.87 Yes 31 92.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 104122298 + NM_001199378 GBF1 1 0.08 0.17 11 3.68 77.45 77 8.65 Yes 3 0.94 Yes 0 0 No -23 0.62 No 47 50.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 104123517 + NM_001199378 GBF1 1 0.06 0.1 7 12.22 86.58 21 5.42 No 36 0.3 No 0 0 No -26 0.57 No 44 66.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104125139 + NM_001199378 GBF1 1 0.12 0.25 15 3.81 80.07 22 4.9 No 20 0.17 No 22 0.58 Yes -22 0.42 No 53 60.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 104126870 + NM_001199378 GBF1 1 1.83 2.82 67 3.89 72.52 23 6.16 Yes 10 0.97 Yes 0 0 No -22 0.75 Yes 48 79.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104127171 + NM_001199378 GBF1 1 0.06 0.1 7 -0.15 71.35 24 5.48 No 22 1.56 Yes 0 0 No -23 0.7 Yes 47 78.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104128054 + NM_001199378 GBF1 1 0.07 0.1 7 -2.64 75.86 28 6.32 Yes 63 -4.06 No 0 0 No -27 0.72 Yes 43 59.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104140089 + NM_001199378 GBF1 1 0.08 0.14 8 -3.03 59.05 53 8.17 Yes 40 0.84 Yes 0 0 No -24 0.9 Yes 46 62.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 104140330 + NM_001199378 GBF1 1 0.14 0.18 12 -0.18 0 20 4.47 No 54 -4.51 No 0 0 No -22 0.61 No 48 55.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 136029495 - NM_001288572 GBGT1 1 7.23 0.71 28 6.82 87.13 19 5 No 6 1.02 Yes 0 0 No -18 0.7 Yes 52 91.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136029630 - NM_001288572 GBGT1 1 13.72 1.24 43 3.2 85.19 25 4.07 No 26 0.37 No 24 0.86 Yes -27 0.74 Yes 46 65.14 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 136030737 - NM_001288572 GBGT1 1 4.26 0.56 28 -0.18 0 19 3.71 No 34 -2.6 No 0 0 No -16 0.64 No 58 39.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 89519146 - NM_002053 GBP1 1 0.07 0.22 13 0.68 0 9 3.87 No 33 1.76 Yes 0 0 No -29 0.81 Yes 41 93.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 89572736 - NM_004120 GBP2 1 2.09 1.99 57 6.83 76.6 23 5.03 No 10 0.55 No 22 0.64 Yes -22 0.37 No 48 39.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 89587686 - NM_004120 GBP2 1 0.12 0.18 9 0.31 0 29 6.25 Yes 16 0.92 Yes 21 0.56 Yes -28 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 163215651 + NM_001330270 GCA 1 0.29 0.29 16 4.35 71.75 24 5.16 No 60 1.16 Yes 0 0 No -26 0.69 Yes 44 74.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 163217255 + NM_001330270 GCA 1 0.78 0.93 39 1.12 62 31 5.74 Yes 18 0.49 No 30 0.77 Yes -30 0.58 No 40 68.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 163215985 + NM_001330270 GCA 1 0.11 0.14 9 -3.9 53.34 82 8.35 Yes 5 -2.61 No 24 0.6 Yes -39 0.46 No 31 48.59 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 163216735 + NM_001330270 GCA 1 0.27 0.31 18 2.3 0 19 4.24 No 15 0.52 No 0 0 No -27 0.51 No 43 51.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 163216735 + NM_001330270 GCA 1 0.58 0.69 32 2.3 0 19 4.24 No 15 0.52 No 0 0 No -27 0.51 No 43 51.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 38205955 + NM_014291 GCAT 1 14.7 2.1 49 7.08 82.85 38 6.24 Yes 69 2.35 Yes 37 0.47 Yes -37 0.85 Yes 33 94.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38209283 + NM_014291 GCAT 1 1.96 0.46 23 7.66 77.2 31 7.39 Yes 3 1.77 Yes 30 0.94 Yes -30 0.96 Yes 40 95.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 109070467 + NR_028063 GCC2 1 0.96 0.64 25 -1.44 83.28 31 5.89 Yes 66 0.9 Yes 0 0 No -30 0.66 Yes 40 60.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 109077776 + NR_028063 GCC2 1 0.17 0.11 7 9.84 84.39 32 7.16 Yes 19 1.53 Yes 0 0 No -30 0.76 Yes 39 80.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 109085755 + NR_028063 GCC2 1 0.41 0.25 16 7.62 84.32 34 6.59 Yes 21 1.05 Yes 33 0.83 Yes -27 0.7 Yes 37 75.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 109091244 + NR_028063 GCC2 1 2.64 2.01 53 4.47 74.31 44 6.51 Yes 60 1.56 Yes 35 0.54 Yes -29 0.59 No 35 55.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 109092561 + NR_028063 GCC2 1 0.34 0.25 16 7.13 89.98 25 4.49 No 12 0.47 No 0 0 No -24 0.89 Yes 46 85.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 109098165 + NR_028063 GCC2 1 0.26 0.21 12 0.33 72.33 17 4.61 No 20 0.43 No 26 0.42 Yes -20 0.59 No 50 73.51 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 109102102 + NR_028063 GCC2 1 0.31 0.24 15 1.46 0 14 4.47 No 18 1.01 Yes 0 0 No -44 0.66 Yes 26 48.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 109102271 + NR_028063 GCC2 1 0.31 0.21 9 -1.53 57.29 24 5.77 Yes 59 0.78 Yes 21 0.95 Yes -23 0.62 No 40 30.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 109102954 + NR_028063 GCC2 1 1.52 1.06 47 -0.47 0 16 4.58 No 55 0.5 No 21 0.81 Yes -14 0.42 No 55 47.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 13002644 + NR_102317 GCDH 1 2.75 2.26 48 2.55 83.57 21 4.57 No 52 -3.17 No 24 0.78 Yes -24 0.8 Yes 46 62.88 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 13003130 + NR_102317 GCDH 1 0.23 0.28 16 9.45 82.3 92 9.8 Yes NA NA NA 33 0.11 Yes -57 0.59 No 30 16.17 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 13007703 + NR_102317 GCDH 1 0.1 0.13 8 -3.74 61.82 37 6.13 Yes 37 -1.82 No 22 0.9 Yes -35 0.9 Yes 35 97.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 13008143 + NR_102317 GCDH 1 0.11 0.14 8 4.46 76.93 10 5.39 No 36 1.26 Yes 0 0 No -22 0.39 No 48 68.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 75892133 - NM_003203 GCFC2 1 0.32 0.13 8 8.18 86.54 35 4.79 No 22 0.6 No 0 0 No -26 0.86 Yes 44 89.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 75900621 - NM_003203 GCFC2 1 0.14 0.1 7 1.82 78.11 31 5.59 Yes 39 1.88 Yes 0 0 No -31 0.36 No 40 39.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 75916266 - NM_003203 GCFC2 1 0.26 0.19 7 3.51 76.95 30 5.48 No 17 0.59 No 0 0 No -29 0.7 Yes 41 67.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 75929574 - NM_003203 GCFC2 1 17.96 12.82 72 7.58 82.8 22 6.07 Yes 9 0.41 No 26 0.76 Yes -21 0.85 Yes 49 93.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 75929934 - NM_003203 GCFC2 1 0.54 0.36 22 6.8 78.39 20 6.2 Yes 7 1.23 Yes 0 0 No -23 0.81 Yes 47 93.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55309773 - NM_000161 GCH1 1 16.9 22.32 72 7.29 88.72 21 5 No 49 0.02 No 20 0.87 Yes -20 0.63 No 45 74.4 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 55309773 - NM_000161 GCH1 1 0.22 0.31 19 7.29 88.72 21 5 No 49 0.02 No 20 0.87 Yes -20 0.63 No 45 74.4 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 55310588 - NM_000161 GCH1 1 2.7 3.25 61 7.12 73.53 24 7.5 Yes 31 0.57 No 23 0.88 Yes -23 0.83 Yes 47 89.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 55312566 - NM_000161 GCH1 1 0.23 0.38 22 0 0 27 5.56 Yes 14 0.96 Yes 0 0 No -26 0.53 No 38 70.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 55323486 - NM_000161 GCH1 1 0.11 0.14 9 9.15 84.16 27 6 Yes 14 0.67 No 0 0 No -26 0.5 No 44 47.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 55330897 - NM_000161 GCH1 1 0.11 0.15 9 6.02 85.68 30 3.88 No 56 0.51 No 0 0 No -23 0.91 Yes 47 92.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41058057 + NM_005258 GCHFR 1 0.42 0.14 9 -1.23 60.52 22 6.22 Yes 30 -1.83 No 21 0.43 Yes -18 0.35 No 11 36.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 53377631 - NM_001498 GCLC 1 0.22 0.13 9 3.01 74.38 32 6.61 Yes 19 0.92 Yes 0 0 No -31 0.92 Yes 39 89.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 53379331 - NM_001498 GCLC 1 0.7 0.4 22 3.43 68.09 44 6.82 Yes -4 0.66 No 32 0.67 Yes -32 0.84 Yes 38 79.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 53381016 - NM_001498 GCLC 1 0.63 0.31 18 0.47 0 26 4.73 No 62 -0.93 No 24 0.46 Yes -29 0.53 No 45 63.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 94359647 - NM_002061 GCLM 1 2.13 2.6 66 8.46 93.53 20 5.56 Yes 7 1.12 Yes 0 0 No -24 0.83 Yes 46 83.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120569156 - NM_006836 GCN1 1 0.18 0.28 14 1.35 73.49 43 7.72 Yes 68 -5.27 No 25 0.95 Yes -20 0.6 No 50 56.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 120574555 - NM_006836 GCN1 1 0.15 0.31 17 2.28 78.57 16 4.69 No -4 0.29 No 26 0.85 Yes -15 0.29 No 55 49.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 120575121 - NM_006836 GCN1 1 0.07 0.14 10 -3.42 65.16 46 7.07 Yes 33 -0.39 No 0 0 No -35 0.5 No 37 74.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 120586071 - NM_006836 GCN1 1 0.12 0.19 11 -0.24 64.66 39 6.4 Yes 26 0.85 Yes 0 0 No -28 0.78 Yes 32 75.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120586528 - NM_006836 GCN1 1 0.07 0.11 7 5.33 79.62 29 4.41 No 2 1.26 Yes 0 0 No -28 0.89 Yes 42 85.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120587518 - NM_006836 GCN1 1 1.86 3.4 66 1.8 0 10 4 No 18 1.45 Yes 0 0 No -30 0.76 Yes 40 82.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120589190 - NM_006836 GCN1 1 0.17 0.39 22 -1.3 0 9 3.87 No 14 0.82 Yes 0 0 No -26 0.95 Yes 44 81.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120592145 - NM_006836 GCN1 1 0.13 0.26 17 8.1 94.05 15 6.92 Yes 73 0.47 No 0 0 No -24 0.63 No 46 76.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 120593493 - NM_006836 GCN1 1 0.07 0.18 12 1.16 72.38 26 6.32 Yes 45 0.85 Yes 26 0.93 Yes -25 0.91 Yes 45 89.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 120594334 - NM_006836 GCN1 1 0.19 0.29 15 -1.04 0 27 4.63 No 42 2.08 Yes 0 0 No -26 0.84 Yes 44 88.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120594339 - NM_006836 GCN1 1 0.1 0.14 10 8.43 88.21 22 4.33 No 37 2.1 Yes 0 0 No -21 0.87 Yes 49 86.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120600129 - NM_006836 GCN1 1 0.12 0.31 12 -1.33 57.17 53 9.88 Yes 40 1.42 Yes 0 0 No -52 0.74 Yes 18 92.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120600765 - NM_006836 GCN1 1 0.05 0.13 7 2.75 0 14 4.47 No 21 0.54 No 0 0 No -33 0.92 Yes 37 92.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 120600794 - NM_006836 GCN1 1 2.82 6.9 72 -11.93 0 19 4.24 No 70 -5.68 No 22 0.94 Yes -14 0.4 No 16 37.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 120614040 - NM_006836 GCN1 1 0.09 0.22 14 -1.87 63.5 24 3.86 No -2 0.78 Yes 29 0.84 Yes -36 0.35 No 54 57.04 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 120615354 - NM_006836 GCN1 1 1.29 3.63 69 2.35 0 24 5.83 Yes 58 1.71 Yes 0 0 No -23 0.76 Yes 47 93.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120617521 - NM_006836 GCN1 1 0.15 0.21 15 7.98 75.12 29 10.05 Yes 50 0.86 Yes 0 0 No -37 0.62 No 33 80.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 120621525 - NM_006836 GCN1 1 0.48 0.68 30 3.39 83.72 23 4.8 No 48 -2.8 No 0 0 No -22 0.92 Yes 48 60.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 120621689 - NM_006836 GCN1 1 0.08 0.13 7 8.45 84.49 19 5.39 No 18 1.33 Yes 0 0 No -30 0.86 Yes 40 93.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120622045 - NM_006836 GCN1 1 0.29 0.42 20 1.29 75.19 29 6.51 Yes 16 1.69 Yes 0 0 No -28 0.92 Yes 42 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 111842623 - NM_001190259 GCSAM 1 4.73 14.72 72 0.76 76.38 20 5.02 No 7 0.67 No 25 0.79 Yes -22 0.83 Yes 48 82.98 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 111842623 - NM_001190259 GCSAM 1 0.2 0.63 31 0.76 76.38 20 5.02 No 7 0.67 No 25 0.79 Yes -22 0.83 Yes 48 82.98 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 111844101 - NM_001190259 GCSAM 1 0.09 0.29 19 -11.14 0 26 4.52 No 9 0.71 No 0 0 No -25 0.96 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 111847072 - NM_001190259 GCSAM 1 0.5 1.17 51 -3.56 0 26 5.46 No 13 0.02 No 0 0 No -25 0.79 Yes 45 78.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 111847076 - NM_001190259 GCSAM 1 6.06 15 72 5.75 82.32 22 5.08 No 9 0.03 No 21 0.84 Yes -21 0.8 Yes 49 71.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 111847076 - NM_001190259 GCSAM 1 0.32 0.75 31 5.75 82.32 22 5.08 No 9 0.03 No 21 0.84 Yes -21 0.8 Yes 49 71.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 111849361 - NM_001190259 GCSAM 1 598.65 170.43 72 1.23 0 9 3.87 No 16 0.28 No 22 0.88 Yes -28 0.92 Yes 42 97.02 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 111851563 - NM_001190259 GCSAM 1 0.3 0.1 7 5.02 81.09 16 5.67 Yes 35 1.14 Yes 0 0 No -21 0.48 No 49 42.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 111851668 - NM_001190259 GCSAM 1 0.5 0.14 7 -0.65 71.39 20 4.68 No 56 -4.3 No 0 0 No -23 0.58 No 47 61.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 111851758 - NM_001190259 GCSAM 1 29.36 8.56 72 8.42 79.6 13 5.64 Yes 30 0.36 No 25 0.55 Yes -23 0.35 No 52 65.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 81116587 - NR_033249 GCSH 1 0.72 1.11 42 -1.69 60.04 23 4.42 No 18 0.7 No 23 0.52 Yes -14 0.39 No 56 27.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 81117949 - NR_033249 GCSH 1 0.09 0.17 8 2.2 66.97 41 6.82 Yes 22 1.42 Yes 0 0 No -34 0.54 No 36 65.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 81124713 - NR_033249 GCSH 1 0.5 0.56 26 12.22 92.17 27 6.45 Yes 14 1.01 Yes 26 0.82 Yes -20 0.5 No 44 57.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 75275618 + NM_018972 GDAP1 1 0.36 0.14 8 7.23 0 15 4.58 No 22 0.56 No 0 0 No -34 0.39 No 36 58.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 75276222 + NM_018972 GDAP1 1 0.43 0.17 11 0.61 71.98 31 7.14 Yes 18 1.67 Yes 0 0 No -30 0.91 Yes 40 90.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 118420464 - NM_017686 GDAP2 1 4.06 1.83 51 7.77 73.34 27 5.89 Yes 14 0.59 No 26 0.86 Yes -26 0.7 Yes 44 51.87 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 118420738 - NM_017686 GDAP2 1 1.63 0.78 38 10.02 94.71 43 5.84 Yes 70 0.65 No 0 0 No -32 0.42 No 38 62.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 118420738 - NM_017686 GDAP2 1 0.34 0.17 11 10.02 94.71 43 5.84 Yes 70 0.65 No 0 0 No -32 0.42 No 38 62.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 118441801 - NM_017686 GDAP2 1 0.73 0.54 33 8.09 79.2 32 5.65 Yes 32 0.78 Yes 0 0 No -31 0.92 Yes 39 97.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 118445411 - NM_017686 GDAP2 1 0.38 0.28 17 8 90.78 34 6.7 Yes 52 1.77 Yes 0 0 No -27 0.51 No 43 77.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 118454735 - NM_017686 GDAP2 1 0.28 0.13 9 4.43 70.57 36 5.67 Yes -2 1.22 Yes 27 0.76 Yes -35 0.89 Yes 35 94.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 118456122 - NM_017686 GDAP2 1 1.78 1.13 51 7.65 85.15 17 4.42 No 4 1.1 Yes 28 0.61 Yes -28 0.4 No 42 58.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 118459245 - NM_017686 GDAP2 1 0.31 0.21 14 5.57 80.45 39 7.29 Yes 56 0.92 Yes 0 0 No -38 0.73 Yes 32 90.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 118462968 - NM_017686 GDAP2 1 0.33 0.11 7 6.11 72.38 28 5.62 Yes 72 -3.73 No 0 0 No -27 0.58 No 43 69.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 19514963 - NM_001324066 GDE1 1 0.13 0.14 8 7.45 91.21 26 5.29 No 13 0.66 No 27 0.97 Yes -25 0.67 Yes 45 70.55 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 19528512 - NM_001324066 GDE1 1 1366.45 64.15 72 5 82.23 24 4.72 No 11 0.9 Yes 29 0.81 Yes -29 0.59 No 41 73.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 153670004 + NM_001493 GDI1 1 0.15 0.26 13 1.83 75.91 15 5.1 No 2 0.12 No 0 0 No -23 0.79 Yes 47 62.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153670417 + NM_001493 GDI1 1 0.23 0.42 22 4.85 69.14 29 6.23 Yes NA NA NA 22 0.96 Yes -23 0.69 Yes 47 62.09 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 5808138 - NM_001115156 GDI2 1 0.02 0.22 11 2.16 69.16 30 5.48 No 17 0.2 No 25 0.91 Yes -29 0.79 Yes 41 82.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 5810347 - NM_001115156 GDI2 1 0.02 0.18 12 -14.97 0 17 5.36 No 4 0.26 No 0 0 No -28 0.94 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 5825377 - NM_001115156 GDI2 1 0.16 1.78 54 4.65 74.31 39 6.99 Yes 26 0.23 No 0 0 No -38 0.55 No 32 71.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 5826782 - NM_001115156 GDI2 1 0.03 0.35 20 6.53 81.23 23 4.5 No 24 0.65 No 0 0 No -22 0.8 Yes 48 84.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 5836978 - NM_001115156 GDI2 1 0.63 0.17 10 1.03 0 33 3.5 No 3 0.98 Yes 19 0.55 Yes -30 0.64 No 40 84.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 5836983 - NM_001115156 GDI2 1 2737.12 870.76 72 9.19 82.82 28 3.24 No -2 1.01 Yes 27 0.74 Yes -25 0.72 Yes 45 83.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 5838309 - NM_001115156 GDI2 1 2.28 0.76 36 3.8 84.41 30 6 Yes 17 1.2 Yes 0 0 No -29 0.87 Yes 41 89.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 5838825 - NM_001115156 GDI2 1 0.04 0.31 18 -8.87 0 33 9.52 Yes 20 0.75 No 0 0 No -32 0.82 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 5842653 - NM_001115156 GDI2 1 0.02 0.14 8 3.87 84.21 21 5 No 61 0.61 No 0 0 No -39 0.83 Yes 52 57.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 5844304 - NM_001115156 GDI2 1 0.37 1.96 55 3.95 86.19 19 4.79 No 35 1.68 Yes 0 0 No -18 0.69 Yes 23 44.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 5844318 - NM_001115156 GDI2 1 0.02 0.13 9 3.06 69.49 34 7.66 Yes 21 1.71 Yes 0 0 No -33 0.64 No 37 78.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 5847323 - NM_001115156 GDI2 1 0.02 0.1 7 8.08 85.05 31 7.68 Yes 40 1.01 Yes 0 0 No -31 0.59 No 40 80.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 5847924 - NM_001115156 GDI2 1 0.03 0.18 10 5.89 74.83 32 6.15 Yes 42 0.3 No 0 0 No -37 0.23 No 53 27.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 5848013 - NM_001115156 GDI2 1 0.08 0.4 20 6.04 75.67 33 4.43 No 36 0.9 Yes 0 0 No -23 0.75 Yes 47 73.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 5853723 - NM_001115156 GDI2 1 0.02 0.1 7 5.38 83.93 29 5.7 Yes 16 0.7 No 0 0 No -34 0.68 Yes 36 88.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 5853920 - NM_001115156 GDI2 1 0.43 2.29 63 13.24 100 42 3.92 No 41 0 No 28 0.67 Yes -26 0.23 No 44 63.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 5854406 - NM_001115156 GDI2 1 0.05 0.25 12 5.2 80.07 75 11 Yes 62 2.19 Yes 0 0 No -35 0.48 No 54 57.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75159695 - NM_030792 GDPD5 1 6.7 0.61 32 5.36 77.81 28 5.83 Yes 15 0.21 No 27 0.93 Yes -27 0.81 Yes 43 89.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 75164016 - NM_030792 GDPD5 1 12.48 0.76 31 4.86 84.9 13 4.56 No 0 1.26 Yes 19 0.87 Yes -19 0.78 Yes 51 82.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 75183852 - NM_030792 GDPD5 1 1.63 0.19 11 7.32 74.7 29 8.11 Yes 16 0.68 No 0 0 No -28 0.67 Yes 42 85.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 75217871 - NM_030792 GDPD5 1 1.63 0.15 8 3.21 76.81 21 5.2 No 8 -0.96 No 0 0 No -20 0.92 Yes 50 87.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 39591107 + NM_001009182 GEMIN2 1 0.15 0.13 9 7.28 85.02 26 7.55 Yes 13 1.48 Yes 28 0.88 Yes -25 0.91 Yes 45 93.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 39591110 + NM_001009182 GEMIN2 1 0.15 0.13 7 3.74 80.12 29 7.75 Yes 16 1.46 Yes 28 0.88 Yes -28 0.91 Yes 42 93.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 39605134 + NM_001009182 GEMIN2 1 0.91 0.78 37 5.76 79.87 42 7.27 Yes 29 1.69 Yes 0 0 No -30 0.48 No 40 63.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 653150 - NM_015721 GEMIN4 1 6.77 3.18 62 11.71 87.8 22 6.62 Yes 34 0.4 No 25 0.47 Yes -42 0.38 No 45 69.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 154268973 - NM_015465 GEMIN5 1 0.15 0.13 7 -2.92 0 29 6.92 Yes 16 0.21 No 0 0 No -28 0.85 Yes 42 85.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 154296685 - NM_015465 GEMIN5 1 0.13 0.15 8 6.5 74.76 25 4.89 No 61 0.91 Yes 0 0 No -24 0.31 No 52 39.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 154305538 - NM_015465 GEMIN5 1 0.19 0.14 10 7.39 75.83 30 4.75 No NA NA NA 0 0 No -28 0.6 No 42 78.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 154311135 - NM_015465 GEMIN5 1 13.58 12.53 72 -0.4 71.59 31 6.35 Yes 53 0.95 Yes 0 0 No -30 0.57 No 40 28.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 39006399 + NM_024775 GEMIN6 1 13.97 18.54 72 3.18 0 31 4.59 No 26 0.67 No 30 0.72 Yes -30 0.82 Yes 40 90.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 39008684 + NM_024775 GEMIN6 1 0.18 0.24 15 5.6 72.61 14 5.32 No 34 1.4 Yes 0 0 No -30 0.55 No 40 58.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 45583193 + NM_024707 GEMIN7 1 1.68 0.5 24 2.43 72.62 35 5.01 No 74 0.51 No 0 0 No -34 0.84 Yes 36 61.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 14032656 - NM_001042480 GEMIN8 1 0.77 0.42 25 8.6 83.32 29 6.85 Yes 16 1.26 Yes 28 0.86 Yes -28 0.89 Yes 42 94.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 14038478 - NM_001042480 GEMIN8 1 1.33 0.85 38 7.73 75.61 25 8.25 Yes 12 1.39 Yes 0 0 No -24 0.96 Yes 46 97.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 14044341 - NM_001042480 GEMIN8 1 245.32 29.08 72 9.52 91.37 26 7.48 Yes 13 2.02 Yes 25 0.94 Yes -25 0.9 Yes 45 90.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 17941178 + NM_001130009 GEN1 1 11.38 2.33 60 1.16 69.24 33 3.83 No 4 0.48 No 35 0.35 Yes -32 0.72 Yes 38 68.55 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 17941198 + NM_001130009 GEN1 1 10 2.08 61 4.3 69.46 24 5.39 No 24 0.48 No 0 0 No -24 0.55 No 46 69.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 17945446 + NM_001130009 GEN1 1 0.79 0.57 26 6.88 83.1 31 6.1 Yes 18 0.59 No 0 0 No -30 0.64 No 40 63.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 17948323 + NM_001130009 GEN1 1 1.88 1.99 58 10.94 83.82 22 7.62 Yes 9 1.22 Yes 0 0 No -21 0.55 No 49 75.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 17952262 + NM_001130009 GEN1 1 8.55 5.82 69 11.59 85.12 46 6.78 Yes 46 -3.19 No 0 0 No -25 0.63 No 39 43.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 17953364 + NM_001130009 GEN1 1 0.67 0.38 20 7.59 85.94 21 5.12 No 5 0.57 No 0 0 No -20 0.58 No 50 48.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 92946967 - NM_001127215 GFI1 1 0.66 0.21 11 9.56 82.16 23 5.2 No 32 -1.56 No 0 0 No -22 0.74 Yes 48 65.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 92948600 - NM_001127215 GFI1 1 0.47 0.13 7 2.02 0 24 5.86 Yes 11 2 Yes 0 0 No -23 0.84 Yes 47 87.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 158373593 + NM_001308164 GFM1 1 0.07 0.21 13 5.87 76.24 30 8.86 Yes 35 0.95 Yes 29 0.79 Yes -33 0.74 Yes 37 63.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 158376714 + NM_001308164 GFM1 1 0.07 0.19 12 -0.36 0 57 8.5 Yes 11 1.09 Yes 0 0 No -56 0.45 No 20 65.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 158384094 + NM_001308164 GFM1 1 0.06 0.11 7 4.27 82.18 25 7.77 Yes 12 0.75 No 0 0 No -28 0.33 No 46 38.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 74017882 - NM_001281302 GFM2 1 0.78 0.76 40 6.51 86.35 20 4.32 No 68 1.06 Yes 0 0 No -28 0.75 Yes 42 66.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 74026601 - NM_001281302 GFM2 1 0.89 0.74 35 9.73 83.18 27 5.42 No 3 0.34 No 26 0.55 Yes -26 0.39 No 43 31.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 74038305 - NM_001281302 GFM2 1 0.44 0.36 22 5.83 77.45 28 5.71 Yes 52 1.23 Yes 0 0 No -27 0.33 No 43 41.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 74043218 - NM_001281302 GFM2 1 0.79 0.51 24 8.11 83.46 21 4.99 No -1 1.02 Yes 0 0 No -23 0.59 No 47 76.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 67726080 - NM_001243650 GFOD2 1 0.88 0.17 12 8.97 90.72 26 5.29 No 22 0.94 Yes 0 0 No -25 0.94 Yes 45 95.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67738998 - NM_001243650 GFOD2 1 0.61 0.15 9 6.94 89.54 26 6.31 Yes 13 0.66 No 0 0 No -25 0.9 Yes 45 76.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 69561261 - NM_002056 GFPT1 1 0.04 0.11 7 5.72 90.92 28 5.29 No 36 0.17 No 0 0 No -27 0.56 No 43 49.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 69581445 - NM_002056 GFPT1 1 0.14 0.4 22 7.71 75.73 35 5.21 No 22 1.12 Yes 31 0.49 Yes -34 0.58 No 36 49.2 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 69583686 - NM_002056 GFPT1 1 0.07 0.24 15 3.62 0 27 5.89 Yes 14 1.69 Yes 0 0 No -26 0.74 Yes 44 92.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 69603174 - NM_002056 GFPT1 1 0.29 0.43 21 7.18 86.73 37 5.12 No 71 0.62 No 0 0 No -32 0.75 Yes 38 83.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 69610140 - NM_002056 GFPT1 1 0.66 0.92 37 8.44 87.9 34 7.32 Yes 21 0.58 No 0 0 No -25 0.84 Yes 45 86.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 69610216 - NM_002056 GFPT1 1 0.56 0.83 38 9.97 81.87 15 4.01 No 39 0.49 No 0 0 No -25 0.85 Yes 45 69.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 38013288 + NM_001172688 GGA1 1 0.4 0.18 12 7.63 85.97 26 5.66 Yes 58 -1.19 No 0 0 No -25 0.9 Yes 45 88.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 38015806 + NM_001172688 GGA1 1 2.06 1.79 52 11.43 89.26 33 6.77 Yes 51 0.83 Yes 28 0.64 Yes -32 0.45 No 38 58.53 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 38020887 + NM_001172688 GGA1 1 3.44 1.9 55 8.58 82.58 45 7.14 Yes -4 0.85 Yes 0 0 No -26 0.53 No 28 56.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 38026594 + NM_001172688 GGA1 1 0.37 0.14 10 -1.64 83 19 4.87 No 28 1.65 Yes 0 0 No -29 0.59 No 41 82.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 38026596 + NM_001172688 GGA1 1 0.4 0.14 8 -4.5 86.77 21 5.02 No 30 1.64 Yes 0 0 No -20 0.62 No 39 78.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 38026618 + NM_001172688 GGA1 1 0.28 0.1 7 2.75 80.97 15 4.8 No 2 1.7 Yes 0 0 No -26 0.64 No 17 84.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 38026919 + NM_001172688 GGA1 1 0.95 0.38 21 -17.43 0 13 3.74 No 19 0.69 No 0 0 No -31 0.51 No 39 41.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 38027589 + NM_001172688 GGA1 1 0.61 0.39 20 2.26 78.65 23 4.9 No 10 0.83 Yes 0 0 No -22 0.95 Yes 48 95.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23481483 - NM_015044 GGA2 1 0.14 0.28 15 -1.03 0 33 6.98 Yes 20 0.99 Yes 0 0 No -32 0.73 Yes 38 74.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23484345 - NM_015044 GGA2 1 0.1 0.19 13 1.34 0 34 5.45 No 29 1.58 Yes 0 0 No -29 0.78 Yes 41 93.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23499446 - NM_015044 GGA2 1 0.35 0.83 36 6.79 80.54 17 4.43 No 55 0.35 No 0 0 No -25 0.59 No 45 51.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23504843 - NM_015044 GGA2 1 0.16 0.21 12 -7.02 0 9 3.3 No 64 -1.32 No 28 0.47 Yes -16 0.82 Yes 54 34.22 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 23504909 - NM_015044 GGA2 1 0.58 0.82 35 3.89 68.71 55 7.6 Yes 15 0.41 No 27 0.89 Yes -27 0.89 Yes 43 65.88 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 23506492 - NM_015044 GGA2 1 0.25 0.29 18 5.64 87.96 17 5.73 Yes 4 0.41 No 0 0 No -20 0.63 No 50 69.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 73235100 - NM_001172704 GGA3 1 0.17 0.13 7 3.88 76.73 36 7.28 Yes 70 1.36 Yes 25 0.73 Yes -36 0.48 No 34 46.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 73237532 - NM_001172704 GGA3 1 0.28 0.29 17 1.28 67.45 46 7.48 Yes 33 -2.06 No 0 0 No -25 0.61 No 25 45.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73237617 - NM_001172704 GGA3 1 0.25 0.26 16 -18.63 0 15 4 No 76 -4.91 No 24 0.92 Yes -51 0.17 No 61 26.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 73237775 - NM_001172704 GGA3 1 0.1 0.13 7 -12.45 74.1 23 4.68 No 16 0.33 No 0 0 No -22 0.78 Yes 25 83.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73239211 - NM_001172704 GGA3 1 0.12 0.17 11 5.6 74.35 23 5.92 Yes 10 0.51 No 0 0 No -22 0.83 Yes 48 78.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73239340 - NM_001172704 GGA3 1 2.03 2.74 63 10.54 89.92 20 6.16 Yes 48 -0.62 No 31 0.6 Yes -31 0.75 Yes 39 82.34 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73240799 - NM_001172704 GGA3 1 1254.89 75.72 72 9.08 82.79 31 4.84 No 14 1.49 Yes 26 0.93 Yes -30 0.77 Yes 40 86.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 101186029 - NM_001195087 GGACT 1 7.83 1 44 7.73 83.57 37 4.82 No 51 1.14 Yes 0 0 No -30 0.76 Yes 40 83.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 101194043 - NM_001195087 GGACT 1 1.34 0.18 12 9.81 94.56 29 6.39 Yes 16 1.14 Yes 28 0.8 Yes -28 0.9 Yes 42 93.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 30537513 - NM_024051 GGCT 1 1.31 3.28 69 10.75 88.26 20 7.42 Yes 72 1.21 Yes 26 0.66 Yes -26 0.59 No 44 58.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 30537513 - NM_024051 GGCT 1 0.13 0.31 21 10.75 88.26 20 7.42 Yes 72 1.21 Yes 26 0.66 Yes -26 0.59 No 44 58.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 30538341 - NM_024051 GGCT 1 0.21 0.54 28 3.24 76.88 23 5.29 No 41 0.57 No 0 0 No -22 0.83 Yes 48 85.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 85777868 - NM_000821 GGCX 1 3.31 0.57 30 -2.22 0 15 3.86 No 22 1.2 Yes 0 0 No -38 0.59 No 32 78.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 85783114 - NM_000821 GGCX 1 2.47 0.32 15 3.53 85.49 27 6.61 Yes 7 0.97 Yes 0 0 No -26 0.62 No 44 74.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 85786939 - NM_000821 GGCX 1 2.07 1.07 44 9.67 93.95 26 5.39 No 18 1.01 Yes 0 0 No -25 0.84 Yes 45 75.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85786939 - NM_000821 GGCX 1 0.26 0.14 7 9.67 93.95 26 5.39 No 18 1.01 Yes 0 0 No -25 0.84 Yes 45 75.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 63929743 - NM_003878 GGH 1 0.32 0.78 32 9.33 97.52 49 7.28 Yes 36 0.89 Yes 0 0 No -48 0.73 Yes 22 77.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 63936299 - NM_003878 GGH 1 0.62 0.86 34 6.13 72.31 14 5.69 Yes 68 -3.07 No 31 0.26 Yes -31 0.79 Yes 39 85.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 63936499 - NM_003878 GGH 1 0.21 0.32 15 3.7 67.47 35 6.01 Yes 74 0.9 Yes 0 0 No -34 0.63 No 36 33.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 63938854 - NM_003878 GGH 1 0.13 0.24 15 -14.77 59.75 34 5.82 Yes 46 1.14 Yes 0 0 No -28 0.55 No 42 71.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 63938880 - NM_003878 GGH 1 0.07 0.14 9 -0.88 58.55 21 4.86 No 20 1.12 Yes 26 0.89 Yes -48 0.38 No 38 62.7 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 34930924 + NM_024835 GGNBP2 1 1.44 2 66 4.16 85.47 24 4.99 No 11 0.36 No 0 0 No -23 0.89 Yes 47 87.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 34943454 + NM_024835 GGNBP2 1 1.82 2.29 61 0.34 0 15 4.27 No 69 0.67 No 0 0 No -57 0.41 No 13 27.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 25004956 + NM_001288833 GGT1 1 5.92 1.61 43 8.27 72.02 27 7.42 Yes 14 0.39 No 0 0 No -26 0.84 Yes 44 75.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 25005928 + NM_001288833 GGT1 1 15.72 5.42 69 0.71 69.78 27 6.24 Yes 14 2.15 Yes 26 0.96 Yes -26 0.92 Yes 44 94.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 25006324 + NM_001288833 GGT1 1 19.56 4.19 67 8.1 89.73 19 5.47 No 6 1.61 Yes 23 0.85 Yes -23 0.81 Yes 47 90.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 25006097 + NM_001288833 GGT1 1 2.5 0.63 30 7.63 86.13 29 6.49 Yes 35 1.39 Yes 0 0 No -28 0.74 Yes 42 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 25006201 + NM_001288833 GGT1 1 0.43 0.13 7 4.43 80.01 35 4.52 No 45 -2.29 No 19 0.97 Yes -25 0.94 Yes 45 89.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 25006324 + NM_001288833 GGT1 1 103.49 22.75 72 8.1 89.73 19 5.47 No 6 1.61 Yes 23 0.85 Yes -23 0.81 Yes 47 90.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 25006327 + NM_001288833 GGT1 1 0.88 0.22 14 -11.89 69.78 22 5.74 Yes 9 1.6 Yes 23 0.85 Yes -26 0.69 Yes 44 83.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 25006421 + NM_001288833 GGT1 1 0.74 0.14 9 5.79 83.3 26 5.29 No 62 -4.28 No 25 0.92 Yes -25 0.9 Yes 45 87.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 25007044 + NM_001288833 GGT1 1 16.79 5.97 67 1.69 67.95 31 6.61 Yes 18 2.28 Yes 27 0.96 Yes -30 0.89 Yes 40 88.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 25007133 + NM_001288833 GGT1 1 0.55 0.18 11 7.56 77.12 32 8.83 Yes 70 -3.56 No 0 0 No -31 0.83 Yes 39 86.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 25010966 + NM_001288833 GGT1 1 0.24 0.13 8 -0.03 65.61 14 5.1 No 1 0.38 No 18 0.3 Yes -13 0.57 No 57 70.79 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 25019998 + NM_001288833 GGT1 1 0.24 0.18 12 6.72 84.29 33 6.67 Yes 20 0.92 Yes 0 0 No -32 0.81 Yes 38 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 25023092 + NM_001288833 GGT1 1 0.5 0.31 15 7.75 82.55 28 5.83 Yes 15 0.95 Yes 0 0 No -27 0.92 Yes 43 93.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 25023376 + NM_001288833 GGT1 1 6.05 3.31 63 9.79 82.92 43 6.99 Yes 30 1.35 Yes 21 0.64 Yes -42 0.73 Yes 28 82.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 25023437 + NM_001288833 GGT1 1 0.84 0.49 23 2.52 83.97 25 4.9 No 12 0.59 No 0 0 No -24 0.87 Yes 46 79.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40341106 - NM_001142623 GHDC 1 0.44 0.15 8 4.52 83.35 96 8.6 Yes 4 0.51 No 21 0.34 Yes -23 0.38 No 49 43.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 40345120 - NM_001142623 GHDC 1 1.92 0.69 30 7.4 81.99 22 5.17 No 31 0.79 Yes 21 0.51 Yes -32 0.53 No 27 64.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 40345864 - NM_001142623 GHDC 1 0.55 0.14 7 0.9 0 41 6.51 Yes 51 1.2 Yes 0 0 No -26 0.76 Yes 44 87.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 85901167 + NM_014394 GHITM 1 0.02 0.11 7 2.75 74.16 35 6.95 Yes 22 1.64 Yes 0 0 No -34 0.58 No 36 62.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 85902401 + NM_014394 GHITM 1 0.11 1.15 43 1.95 0 43 8.52 Yes 30 1.53 Yes 27 0.62 Yes -29 0.49 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 85909812 + NM_014394 GHITM 1 0.05 0.24 13 -14.69 0 26 5.14 No 49 0.75 No 0 0 No -26 0.86 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 17960016 + NM_024052 GID4 1 2.73 0.47 23 4.68 74.95 24 5.95 Yes -1 0.43 No 24 0.72 Yes -31 0.56 No 39 70.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr20 61569951 + NM_017896 GID8 1 0.32 0.29 15 2.93 76.63 39 6.4 Yes 26 1.15 Yes 24 0.71 Yes -24 0.66 No 32 54.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 61570075 + NM_017896 GID8 1 2.41 2.06 60 7.75 89.6 19 4.58 No 37 1.26 Yes 0 0 No -22 0.67 Yes 48 73.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61572822 + NM_017896 GID8 1 0.36 0.32 16 5.03 76.85 15 5.39 No 2 1.15 Yes 22 0.87 Yes -19 0.45 No 24 27.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 61574313 + NM_017896 GID8 1 0.53 1.01 40 4.28 71.7 22 6.34 Yes -2 1.03 Yes 20 0.64 Yes -22 0.56 No 49 58.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 61574316 + NM_017896 GID8 1 0.34 0.67 33 5.27 80.77 25 6.56 Yes 12 0.94 Yes 20 0.64 Yes -25 0.6 No 46 58.88 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 61574825 + NM_017896 GID8 1 0.13 0.29 18 -2.08 55.4 31 6.08 Yes 18 1.19 Yes 24 0.86 Yes -30 0.77 Yes 40 84.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 100279412 - NM_022574 GIGYF1 1 2.98 1.21 49 -15.06 0 9 3.87 No 60 -4.25 No 25 0.93 Yes -8 0.44 No 57 23.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 100280398 - NM_022574 GIGYF1 1 6.86 0.69 31 4.51 73.03 22 6.12 Yes 9 1.58 Yes 0 0 No -21 0.69 Yes 49 71.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100281062 - NM_022574 GIGYF1 1 0.17 0.1 7 2.36 0 9 3.87 No 12 0.89 Yes 0 0 No -24 0.89 Yes 46 90.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100281062 - NM_022574 GIGYF1 1 0.24 0.13 8 2.36 0 9 3.87 No 12 0.89 Yes 0 0 No -24 0.89 Yes 46 90.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100281209 - NM_022574 GIGYF1 1 0.49 0.29 16 5.18 83.99 15 5.08 No 2 1.24 Yes 0 0 No -26 0.31 No 44 49.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 100281540 - NM_022574 GIGYF1 1 0.46 0.21 12 -3.39 81.92 26 5.65 Yes 68 -3.65 No 0 0 No -25 0.84 Yes 45 79.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 100281964 - NM_022574 GIGYF1 1 0.69 0.25 17 -5.67 0 15 4.58 No 59 -1.43 No 25 0.36 Yes -51 0.35 No 19 45.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 100285221 - NM_022574 GIGYF1 1 3.85 0.69 33 4.06 84.28 22 5.1 No 33 1.69 Yes 0 0 No -21 0.89 Yes 49 93.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 233600462 + NR_103492 GIGYF2 1 1.85 2 58 -5.8 67.51 21 6.09 Yes -3 0.68 No 20 0.59 Yes -20 0.34 No 50 56.48 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 233600472 + NR_103492 GIGYF2 1 3.56 3.97 66 5.54 0 20 4.36 No 7 0.01 No 20 0.59 Yes -19 0.65 No 51 63.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 233600848 + NR_103492 GIGYF2 1 0.1 0.1 7 4.94 78.72 28 5.2 No 56 1.2 Yes 0 0 No -27 0.86 Yes 43 89.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 233602643 + NR_103492 GIGYF2 1 0.17 0.17 11 4.74 84.41 29 6.46 Yes 16 1.55 Yes 0 0 No -29 0.84 Yes 41 89.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 233655425 + NR_103492 GIGYF2 1 9.97 12.58 72 6.54 89.85 26 5.11 No 69 1.15 Yes 25 0.93 Yes -25 0.87 Yes 45 90.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 233655970 + NR_103492 GIGYF2 1 1.6 2.49 63 0.94 70.53 23 5.22 No 75 1.02 Yes 24 0.82 Yes -27 0.65 No 43 74.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 233659551 + NR_103492 GIGYF2 1 0.22 0.29 17 8.17 69.86 30 6.63 Yes 17 1.35 Yes 0 0 No -29 0.95 Yes 41 96.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 233660775 + NR_103492 GIGYF2 1 0.13 0.15 9 -2.03 0 50 6.3 Yes 37 1.13 Yes 0 0 No -49 0.69 Yes 21 57.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 233671583 + NR_103492 GIGYF2 1 0.19 0.29 18 5.73 83.31 29 7.06 Yes 16 1.76 Yes 0 0 No -28 0.72 Yes 42 79.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 233677129 + NR_103492 GIGYF2 1 0.15 0.17 10 1.63 81.23 22 5 No 9 0.59 No 0 0 No -21 0.88 Yes 49 82.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 233681469 + NR_103492 GIGYF2 1 0.08 0.1 7 1.28 78.69 46 8.94 Yes 54 0.68 No 0 0 No -46 0.35 No 25 78.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 233697570 + NR_103492 GIGYF2 1 0.19 0.19 12 -8.11 0 43 6.96 Yes 27 0.51 No 0 0 No -42 0.77 Yes 28 83.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 150386576 + NM_015660 GIMAP2 1 0.48 0.29 19 7.83 87.91 26 7.58 Yes 13 1.76 Yes 29 0.69 Yes -29 0.61 No 45 69.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 150387246 + NM_015660 GIMAP2 1 3.55 2.22 62 8.99 93.78 29 5.71 Yes 7 1.57 Yes 0 0 No -28 0.61 No 42 76.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 102438448 - NM_001317954 GIN1 1 3.03 0.64 29 10.03 87.74 25 6.63 Yes 12 1.41 Yes 24 0.92 Yes -24 0.92 Yes 46 94.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 149898043 + NM_138785 GINM1 1 0.21 0.26 16 7 88.89 21 5.79 Yes 0 0.16 No 0 0 No -20 0.85 Yes 50 85.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 149899933 + NM_138785 GINM1 1 0.16 0.21 11 6.24 83.24 30 4.22 No 2 1.16 Yes 28 0.73 Yes -29 0.94 Yes 41 94.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 149903195 + NM_138785 GINM1 1 0.23 0.24 14 11.82 85.56 38 8.54 Yes 25 1.64 Yes 37 0.83 Yes -37 0.9 Yes 33 91.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 149903684 + NM_138785 GINM1 1 0.17 0.22 10 2.68 78.25 26 4.19 No 70 -3.13 No 0 0 No -25 0.6 No 45 63.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 149908865 + NM_138785 GINM1 1 0.06 0.1 7 10.88 90.92 29 5.45 No 36 -0.74 No 0 0 No -23 0.59 No 47 62.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 149911864 + NM_138785 GINM1 1 0.2 0.32 18 -1.94 84.05 20 4.01 No 7 0.67 No 0 0 No -23 0.43 No 47 62.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 25391759 + NR_134574 GINS1 1 0.58 0.43 23 1.54 60.97 25 5.57 Yes 12 0.24 No 24 0.72 Yes -24 0.88 Yes 46 79.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 25406583 + NR_134574 GINS1 1 0.13 0.14 9 10.99 86.74 41 7.46 Yes 28 0.29 No 0 0 No -40 0.49 No 30 64.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 25407846 + NR_134574 GINS1 1 2.62 2.76 61 6.27 90.14 28 5.29 No 46 0.85 Yes 0 0 No -27 0.68 Yes 43 62.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 85712288 - NM_016095 GINS2 1 0.04 0.1 7 3.63 65.66 27 5.1 No 48 0.34 No 22 0.94 Yes -26 0.67 Yes 47 61.51 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 85712521 - NM_016095 GINS2 1 0.14 0.38 23 6.92 79.53 22 5.64 Yes 20 1.45 Yes 0 0 No -21 0.48 No 49 56.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 85715286 - NM_016095 GINS2 1 0.03 0.11 7 -11.61 0 18 5.72 Yes 73 -5.48 No 0 0 No -28 0.23 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 85715287 - NM_016095 GINS2 1 0.06 0.13 9 -13.27 0 17 5.68 Yes -3 0.04 No 0 0 No -27 0.24 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 41387676 + NM_032336 GINS4 1 0.15 0.11 7 -0.73 67.48 20 4.79 No 48 0.94 Yes 28 0.61 Yes -19 0.52 No 51 54.2 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 41387716 + NM_032336 GINS4 1 0.25 0.17 10 4.44 84.41 20 4.79 No 7 0.35 No 0 0 No -19 0.91 Yes 51 96.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 41388645 + NM_032336 GINS4 1 0.56 0.67 34 -4.61 41.2 45 5.74 Yes 20 0.52 No 0 0 No -40 0.46 No 30 34.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 27901954 - NM_001085454 GIT1 1 0.81 0.64 28 -10.03 0 16 3.87 No 60 1.27 Yes 23 0.84 Yes -16 0.36 No 55 27.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 27901966 - NM_001085454 GIT1 1 0.2 0.14 10 -0.02 66.81 22 4.79 No 48 1.27 Yes 23 0.84 Yes -21 0.7 Yes 54 59.54 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 27902179 - NM_001085454 GIT1 1 0.35 0.33 17 2.99 75.55 20 4.9 No 7 0.14 No 22 0.89 Yes -19 0.92 Yes 51 79.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 27902393 - NM_001085454 GIT1 1 0.26 0.19 9 0.87 77.58 19 5 No NA NA NA 0 0 No -24 0.67 Yes 46 46.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 27902848 - NM_001085454 GIT1 1 0.22 0.15 10 8.9 89.83 34 6.96 Yes 21 1.36 Yes 33 0.85 Yes -33 0.68 Yes 37 92.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 27903460 - NM_001085454 GIT1 1 0.22 0.17 9 -6.5 0 14 4.24 No 17 0.87 Yes 20 0.94 Yes -29 0.86 Yes 41 72.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 27908851 - NM_001085454 GIT1 1 0.43 0.32 18 2.02 0 26 5.65 Yes 13 1.01 Yes 0 0 No -25 0.88 Yes 45 78.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110403380 - NM_001330154 GIT2 1 11.25 6.65 72 5.98 90.77 27 5.47 No 72 -3.1 No 23 0.96 Yes -26 0.94 Yes 44 95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110408271 - NM_001330154 GIT2 1 0.15 0.18 10 4.71 84.17 27 5.04 No 15 -1.68 No 0 0 No -26 0.64 No 44 64.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 30684214 + NM_000167 GK 1 1.02 0.53 29 5.96 78.36 43 5.54 No 27 0.41 No 0 0 No -25 0.6 No 45 72.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 30688418 + NM_000167 GK 1 0.38 0.18 11 11.27 90.92 24 5.03 No 11 0.99 Yes 0 0 No -23 0.85 Yes 47 68.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 30688500 + NM_000167 GK 1 0.55 0.24 13 1.58 63.95 47 8.12 Yes 55 1.06 Yes 0 0 No -35 0.69 Yes 35 78.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 30692418 + NM_000167 GK 1 0.37 0.18 9 8.8 85.66 35 7.14 Yes 22 0.43 No 0 0 No -27 0.42 No 36 45.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 30696110 + NM_000167 GK 1 0.79 0.44 22 13.93 88.64 28 6.49 Yes 15 1.55 Yes 27 0.91 Yes -27 0.81 Yes 43 84.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 30705649 + NM_000167 GK 1 0.27 0.15 8 6.52 82.93 30 6.48 Yes -3 0.99 Yes 0 0 No -35 0.45 No 35 65.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 30713199 + NM_000167 GK 1 0.7 0.29 19 12.78 88.62 22 8.34 Yes 9 1.25 Yes 21 0.92 Yes -21 0.89 Yes 49 92.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 30714160 + NM_000167 GK 1 0.39 0.18 12 -6.29 73.92 27 6.35 Yes 14 1.36 Yes 0 0 No -26 0.76 Yes 44 80.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 30715848 + NM_000167 GK 1 6.76 4.15 67 5.73 76.15 46 7.55 Yes 26 0.33 No 30 0.54 Yes -46 0.76 Yes 24 81.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 30729563 + NM_000167 GK 1 0.31 0.18 12 8.72 82.99 41 7.55 Yes 69 1.67 Yes 0 0 No -24 0.44 No 50 61.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 30738788 + NM_000167 GK 1 0.28 0.24 15 4.34 0 13 4.35 No 59 0.32 No 0 0 No -16 0.53 No 54 39.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 30739604 + NM_000167 GK 1 1.26 0.54 27 7.28 85.02 31 7.87 Yes 18 1.67 Yes 0 0 No -30 0.93 Yes 40 94.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 30745582 + NM_000167 GK 1 191.03 44.47 72 5.79 78.02 33 6.9 Yes 20 0.93 Yes 32 0.79 Yes -32 0.8 Yes 38 77.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 141888166 - NR_033289 GK5 1 1.3 0.26 14 3.61 69.1 28 5.2 No 15 0.77 No 0 0 No -27 0.66 No 43 79.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 141892040 - NR_033289 GK5 1 1.03 0.22 14 11.13 88.27 19 4.51 No 61 -3.67 No 25 0.5 Yes -25 0.9 Yes 45 85.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 141896448 - NR_033289 GK5 1 2.53 0.42 26 11.9 88.92 21 8.38 Yes 8 2.41 Yes 20 0.83 Yes -20 0.79 Yes 50 88.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 141917715 - NR_033289 GK5 1 0.55 0.11 7 0.97 80.74 16 4.59 No 71 0.64 No 0 0 No -25 0.84 Yes 45 84.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 141920442 - NR_033289 GK5 1 0.89 0.22 11 9.88 87.59 30 5.99 Yes 58 -0.99 No 0 0 No -30 0.36 No 49 46.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 141923154 - NR_033289 GK5 1 1.27 0.29 17 5.11 95.52 21 4.9 No 66 0.08 No 20 0.77 Yes -20 0.57 No 50 43.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 141923445 - NR_033289 GK5 1 7.34 1.68 52 11.7 89.16 74 9.25 Yes 19 0.73 No 32 0.82 Yes -31 0.65 No 39 83.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 86407933 - NM_025211 GKAP1 1 22.48 1.44 46 5.5 80.82 29 4.89 No 51 0.32 No 29 0.72 Yes -29 0.69 Yes 41 66.56 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 86407970 - NM_025211 GKAP1 1 10.1 0.44 23 1.04 0 13 3.87 No 75 0.37 No 29 0.72 Yes -37 0.78 Yes 33 73.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 86410069 - NM_025211 GKAP1 1 7.51 0.43 22 4.74 84.41 35 7.79 Yes 16 1.09 Yes 0 0 No -28 0.92 Yes 42 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86412800 - NM_025211 GKAP1 1 3.98 0.14 9 4.28 74.32 82 9.79 Yes 37 1.13 Yes 0 0 No -35 0.57 No 35 63.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 86413014 - NM_025211 GKAP1 1 3.51 0.17 11 7.68 80.73 20 6.96 Yes 35 0.88 Yes 0 0 No -19 0.72 Yes 51 84.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 100654789 - NM_000169 GLA 1 0.73 0.81 34 9.46 90.75 23 7.74 Yes 10 1.94 Yes 22 0.89 Yes -22 0.77 Yes 48 75.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 33040590 - NM_001079811 GLB1 1 1.1 0.54 26 9.5 86.45 25 4.76 No 64 0.63 No 0 0 No -24 0.88 Yes 46 79.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 33043242 - NM_001079811 GLB1 1 0.63 0.33 19 5.91 92.6 29 5.6 Yes 21 0.46 No 0 0 No -20 0.53 No 42 59.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 33071689 - NM_001079811 GLB1 1 0.26 0.15 10 9.06 80.42 24 5.97 Yes 38 1.69 Yes 21 0.93 Yes -23 0.9 Yes 47 88.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 33072304 - NM_001079811 GLB1 1 0.44 0.28 15 10.57 89.45 26 5.28 No 57 0.49 No 25 0.82 Yes -25 0.76 Yes 45 82.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 33079508 - NM_001079811 GLB1 1 0.39 0.24 14 8.18 85.05 36 6.26 Yes 23 1.69 Yes 0 0 No -35 0.78 Yes 35 80.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 33087282 - NM_001079811 GLB1 1 0.59 0.36 19 12.05 96.61 41 7.27 Yes 28 0.87 Yes 40 0.32 Yes -40 0.78 Yes 30 86.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 33087746 - NM_001079811 GLB1 1 0.11 0.1 7 -5.06 0 9 3.26 No 76 1.09 Yes 26 0.72 Yes -18 0.78 Yes 52 40.22 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 33103207 - NM_001079811 GLB1 1 0.26 0.13 7 6.05 78.87 52 7.09 Yes 69 -1.93 No 19 0.44 Yes -19 0.64 No 44 57.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 33112169 - NM_001079811 GLB1 1 0.14 0.11 8 8.9 84.61 27 6.16 Yes 14 1.29 Yes 0 0 No -26 0.89 Yes 44 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 8009531 + NM_138426 GLCCI1 1 0.24 0.14 8 5.74 78.75 27 5.74 Yes 14 -0.49 No 0 0 No -26 0.93 Yes 44 93.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 8047843 + NM_138426 GLCCI1 1 0.59 1.28 43 5.58 80.49 23 3.8 No 14 1.16 Yes 0 0 No -27 0.63 No 43 58.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 8095065 + NM_138426 GLCCI1 1 1.05 1.03 49 6.82 74.01 45 8.18 Yes 32 1.41 Yes 24 0.87 Yes -44 0.9 Yes 26 94.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 8064344 + NM_138426 GLCCI1 1 3.51 3.32 68 8.38 89.89 25 4.57 No 2 0.35 No 28 0.86 Yes -28 0.81 Yes 42 87.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 8080908 + NM_138426 GLCCI1 1 0.21 0.22 15 8.37 75.93 23 6.06 Yes 10 1.66 Yes 0 0 No -22 0.88 Yes 48 88.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 8088383 + NM_138426 GLCCI1 1 0.78 0.67 33 3.88 89.74 17 5.29 No 65 1.58 Yes 0 0 No -27 0.85 Yes 43 65.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 8093146 + NM_138426 GLCCI1 1 0.2 0.19 14 8.99 86.44 29 7.75 Yes 16 1.57 Yes 0 0 No -28 0.94 Yes 42 94.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 8093149 + NM_138426 GLCCI1 1 0.32 0.31 16 7.77 94.37 32 7.94 Yes 19 1.55 Yes 0 0 No -31 0.94 Yes 39 93.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 8095065 + NM_138426 GLCCI1 1 98.62 98.21 72 6.82 74.01 45 8.18 Yes 32 1.41 Yes 24 0.87 Yes -44 0.9 Yes 26 94.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 8102112 + NM_138426 GLCCI1 1 0.1 0.17 11 7.98 91.29 18 4.79 No -4 0.21 No 0 0 No -26 0.4 No 44 53.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 8110646 + NM_138426 GLCCI1 1 0.1 0.18 10 4.87 91.68 24 4.89 No 11 1.08 Yes 0 0 No -23 0.79 Yes 47 87.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 8110712 + NM_138426 GLCCI1 1 8.17 15.51 72 3.69 74.74 38 6.47 Yes 25 1.72 Yes 0 0 No -37 0.93 Yes 33 95.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 8124530 + NM_138426 GLCCI1 1 0.06 0.15 9 -0.52 0 28 4.42 No 39 -4.62 No 0 0 No -27 0.51 No 43 56.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 69514421 + NM_001324091 GLCE 1 2 0.19 13 5.4 74.55 30 7.14 Yes 1 1.01 Yes 0 0 No -29 0.71 Yes 41 69.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 69520522 + NM_001324091 GLCE 1 2.14 0.17 11 9.24 84.41 40 7.17 Yes 27 1.11 Yes 0 0 No -31 0.32 No 31 56.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 6534180 - NM_000170 GLDC 1 0.72 1.08 43 3.97 84.41 41 7.75 Yes 28 1.8 Yes 0 0 No -40 0.7 Yes 30 42.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 6541650 - NM_000170 GLDC 1 2.33 3.65 40 -3.82 0 12 3.87 No 71 1.55 Yes 0 0 No -30 0.86 Yes 40 96.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 6558094 - NM_000170 GLDC 1 0.82 1.28 50 7.69 86.15 50 6.12 Yes 5 1.03 Yes 0 0 No -29 0.41 No 37 45.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 6564892 - NM_000170 GLDC 1 0.08 0.14 7 3.29 70.36 18 4.33 No 24 0.6 No 0 0 No -36 0.47 No 34 39.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 6586293 - NM_000170 GLDC 1 0.16 0.32 18 10.52 86.91 44 6.87 Yes 31 1.48 Yes 0 0 No -28 0.68 Yes 42 65.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 6586488 - NM_000170 GLDC 1 0.3 0.6 28 8.41 88.91 24 5.29 No 17 1.51 Yes 0 0 No -29 0.81 Yes 41 91.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 6643479 - NM_000170 GLDC 1 0.32 0.33 21 10.42 87.56 18 4.41 No 40 0.63 No 0 0 No -29 0.77 Yes 41 65.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 131269494 + NM_001003722 GLE1 1 23.98 22.68 72 4.21 66.2 33 6.23 Yes 54 0.73 No 0 0 No -32 0.37 No 38 49.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 131271238 + NM_001003722 GLE1 1 0.28 0.26 15 6.45 82.54 14 5.48 No 64 -1.97 No 0 0 No -23 0.73 Yes 47 77.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131287432 + NM_001003722 GLE1 1 0.09 0.11 8 2.6 76.38 18 4.9 No 64 0.41 No 25 0.91 Yes -26 0.77 Yes 44 66.27 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 131287475 + NM_001003722 GLE1 1 0.82 0.97 44 -3.99 0 38 5.68 Yes 18 1.07 Yes 0 0 No -30 0.84 Yes 40 79.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131294943 + NM_001003722 GLE1 1 1.35 1.33 50 10.68 86.52 42 5.76 Yes 29 1.62 Yes 36 0.8 Yes -36 0.71 Yes 34 83.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 131296201 + NM_001003722 GLE1 1 0.07 0.1 7 7.18 78.14 30 6.41 Yes 17 1.29 Yes 0 0 No -29 0.96 Yes 41 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131296009 + NM_001003722 GLE1 1 0.2 0.29 16 2.11 73.17 21 5.18 No 8 0.14 No 27 0.67 Yes -20 0.8 Yes 50 82.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 74485266 - NM_001145666 GLG1 1 0.38 0.14 9 -1.63 0 65 9.62 Yes 52 1.02 Yes 0 0 No -53 0.55 No 17 71.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 74503966 - NM_001145666 GLG1 1 0.09 0.18 11 3.4 0 16 3.87 No 18 2.06 Yes 0 0 No -30 0.77 Yes 40 92.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 74537648 - NM_001145666 GLG1 1 0.1 0.19 8 -2.36 78.91 22 4.9 No 9 0.38 No 24 0.68 Yes -21 0.41 No 49 48.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 144356889 + NM_138465 GLI4 1 1.77 0.17 11 3.45 81.05 25 5 No 12 1.92 Yes 24 0.87 Yes -24 0.93 Yes 46 91.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144354565 + NM_138465 GLI4 1 2.76 0.29 19 -4.03 0 14 4.36 No 52 -1.9 No 20 0.4 Yes -20 0.43 No 50 55.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 144356889 + NM_138465 GLI4 1 14.16 1.38 51 3.45 81.05 25 5 No 12 1.92 Yes 24 0.87 Yes -24 0.93 Yes 46 91.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144357152 + NM_138465 GLI4 1 4.4 0.22 13 -1.69 0 44 7.42 Yes 31 1.53 Yes 0 0 No -43 0.82 Yes 27 81.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144357364 + NM_138465 GLI4 1 3.15 0.18 10 10.14 74.39 35 6.69 Yes 54 0.21 No 34 0.84 Yes -34 0.77 Yes 36 82.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144358172 + NM_138465 GLI4 1 1.66 0.14 9 4.7 0 18 4.58 No 5 0.21 No 19 0.3 Yes -17 0.86 Yes 53 84.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144358611 + NM_138465 GLI4 1 1.65 0.11 8 3.67 75.22 25 4.62 No 12 0.08 No 0 0 No -24 0.89 Yes 46 54.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 41953952 - NR_126045 GLIDR 1 1.02 0.13 7 2.15 61.44 26 5.05 No 25 0.61 No 0 0 No -25 0.48 No 45 61.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 41954606 - NR_126045 GLIDR 1 3.28 0.32 19 6.16 83.27 17 4.63 No NA NA NA 0 0 No -22 0.49 No 48 77.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 41954652 - NR_126045 GLIDR 1 2.04 0.17 12 8.29 83.71 23 6.23 Yes NA NA NA 0 0 No -22 0.52 No 53 58.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 75881518 + NM_006851 GLIPR1 1 1.6 1.53 54 13.28 92.69 21 6.62 Yes 8 1.49 Yes 20 0.8 Yes -37 0.56 No 50 84.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 92716790 - NM_001319683 GLMN 1 1.56 1.19 40 9.72 87.64 51 9.31 Yes 38 0.73 No 0 0 No -28 0.38 No 42 64.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 92733688 - NM_001319683 GLMN 1 1.01 0.46 23 0.15 0 20 4.17 No 7 0.31 No 0 0 No -32 0.52 No 38 83.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 92754613 - NM_001319683 GLMN 1 0.21 0.21 10 2.64 68.65 34 6.32 Yes 21 0.36 No 0 0 No -33 0.82 Yes 37 87.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 92754745 - NM_001319683 GLMN 1 1.02 0.85 38 7.09 72.39 37 7.07 Yes 24 0.52 No 28 0.82 Yes -39 0.65 No 31 55.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 92755888 - NM_001319683 GLMN 1 4.41 3.43 71 5.6 83.65 33 5.13 No 58 0.33 No 29 0.77 Yes -32 0.55 No 38 46.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 92760208 - NM_001319683 GLMN 1 0.82 0.36 23 8.29 91.35 25 8.18 Yes 12 1.15 Yes 0 0 No -24 0.86 Yes 46 89.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156263221 - NM_001256605 GLMP 1 8.87 4.1 72 5.56 82.88 20 5.1 No 17 0.42 No 19 0.77 Yes -19 0.81 Yes 51 75.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156263502 - NM_001256605 GLMP 1 1.04 0.53 25 6.11 85.54 28 5.48 No 15 1.12 Yes 27 0.96 Yes -27 0.95 Yes 43 97.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156264551 - NM_001256605 GLMP 1 16.73 0.89 40 9.5 94.98 29 5.92 Yes 41 0.72 No 29 0.8 Yes -28 0.87 Yes 42 89.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156264659 - NM_001256605 GLMP 1 2.79 0.18 12 3.9 72.83 27 6.31 Yes 14 0.43 No 0 0 No -26 0.84 Yes 44 79.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 156264808 - NM_001256605 GLMP 1 625.55 33.99 72 8.15 85.18 69 8.6 Yes 56 1.68 Yes 25 0.92 Yes -25 0.89 Yes 45 90.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 38649844 - NM_006708 GLO1 1 0.04 0.15 10 4.29 75.97 32 5.33 No -2 0.69 No 0 0 No -31 0.5 No 39 80.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 38650650 - NM_006708 GLO1 1 0.05 0.29 19 -16.36 0 24 5.83 Yes 61 -0.56 No 0 0 No -23 0.75 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 38654736 - NM_006708 GLO1 1 0.09 0.21 13 6.3 91.19 20 4.9 No 23 0.07 No 0 0 No -35 0.46 No 51 40.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 38654907 - NM_006708 GLO1 1 0.21 0.5 31 3.8 84.33 25 6.78 Yes 12 0.11 No 0 0 No -24 0.92 Yes 46 93.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 667080 - NM_016080 GLOD4 1 0.14 0.31 13 8.03 79.07 25 4.49 No 61 0.57 No 0 0 No -24 0.94 Yes 46 92.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 673221 - NM_016080 GLOD4 1 0.08 0.15 9 4.29 84.42 18 4.79 No 48 0.24 No 27 0.49 Yes -17 0.66 No 53 77.27 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 673465 - NM_016080 GLOD4 1 0.09 0.19 11 7.02 81.18 47 4.17 No 0 1.27 Yes 22 0.81 Yes -22 0.73 Yes 48 68.92 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 678008 - NM_016080 GLOD4 1 0.11 0.18 10 11.41 89.73 37 6.82 Yes 73 0.75 No 0 0 No -32 0.5 No 34 54.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 682051 - NM_016080 GLOD4 1 0.17 0.15 10 6.14 78.39 27 4.62 No 11 0.97 Yes 33 0.57 Yes -33 0.76 Yes 37 79.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 683979 - NM_016080 GLOD4 1 0.18 0.18 13 6.4 88.76 28 6.24 Yes 15 1.51 Yes 27 0.87 Yes -27 0.9 Yes 43 86.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 95150512 - NM_001118890 GLRX 1 0.68 3.08 65 6.18 86.07 30 4.96 No 18 -1.75 No 29 0.63 Yes -30 0.79 Yes 40 75.39 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 95150657 - NM_001118890 GLRX 1 0.11 0.5 27 0.44 0 37 6.08 Yes 24 0.23 No 0 0 No -36 0.86 Yes 34 96.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 95150662 - NM_001118890 GLRX 1 1.61 7.08 72 11.98 91.32 32 5.66 Yes 19 0.24 No 31 0.83 Yes -31 0.85 Yes 39 96.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 95152265 - NM_001118890 GLRX 1 0.06 0.26 15 4.3 87.05 21 4.8 No 8 1.02 Yes 0 0 No -20 0.84 Yes 50 82.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 95152359 - NM_001118890 GLRX 1 0.03 0.13 9 -3.33 0 15 4.12 No 2 0.25 No 26 0.66 Yes -14 0.77 Yes 56 60.06 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 193067507 - NM_197962 GLRX2 1 0.12 0.11 8 4.25 85.02 17 6.76 Yes 65 0.72 No 0 0 No -26 0.52 No 44 59.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 131960805 + NM_001321980 GLRX3 1 0.03 0.15 10 2.4 79.92 77 6.72 Yes 64 1.38 Yes 0 0 No -21 0.82 Yes 49 74.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 131964842 + NM_001321980 GLRX3 1 0.2 0.82 34 6.05 84.48 13 5.08 No 0 0.48 No 0 0 No -27 0.69 Yes 43 72.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 131967518 + NM_001321980 GLRX3 1 0.1 0.28 17 6.06 85.87 23 4.94 No 65 -3.67 No 0 0 No -23 0.84 Yes 47 86.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191747597 + NM_014905 GLS 1 0.05 0.17 10 10.79 84.22 26 6.4 Yes -3 1.22 Yes 0 0 No -25 0.59 No 45 45.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191754928 + NM_014905 GLS 1 0.04 0.11 7 10.8 86.91 22 10.32 Yes 9 1.26 Yes 0 0 No -21 0.59 No 49 63.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191761320 + NM_014905 GLS 1 0.02 0.13 9 4.98 75.48 45 8.56 Yes -1 0.51 No 0 0 No -44 0.92 Yes 26 95.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191763377 + NM_014905 GLS 1 0.02 0.17 12 1 83.24 24 6.02 Yes 28 0.74 No 0 0 No -23 0.84 Yes 47 77.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191763402 + NM_014905 GLS 1 0.02 0.1 7 5.72 90.92 28 5.29 No 53 0.75 No 0 0 No -27 0.52 No 22 71.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 191763842 + NM_014905 GLS 1 0.1 0.71 31 2.45 0 37 5.35 No 52 0.06 No 0 0 No -34 0.5 No 39 48.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191767803 + NM_014905 GLS 1 0.12 1.08 45 5.75 89.94 60 7.05 Yes 6 0.49 No 0 0 No -29 0.32 No 41 26.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191772012 + NM_014905 GLS 1 0.04 0.26 15 5.41 90.92 28 4.69 No 38 1 Yes 0 0 No -27 0.49 No 20 81.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 191777918 + NM_014905 GLS 1 4.24 21.68 72 11.15 92.63 18 4.66 No 72 1.06 Yes 21 0.41 Yes -24 0.63 No 46 65.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 191784353 + NM_014905 GLS 1 0.19 1.01 41 8.08 82.93 43 6.35 Yes 76 1.82 Yes 0 0 No -22 0.61 No 48 50.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191797441 + NM_014905 GLS 1 0.64 0.33 17 2.34 59.42 31 6.74 Yes 69 0.4 No 30 0.86 Yes -30 0.79 Yes 40 88.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 191797382 + NM_014905 GLS 1 43.18 27.07 72 3.91 73 40 6.15 Yes 10 0.4 No 22 0.93 Yes -22 0.58 No 48 92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 191797441 + NM_014905 GLS 1 861.54 537.9 72 2.34 59.42 31 6.74 Yes 69 0.4 No 30 0.86 Yes -30 0.79 Yes 40 88.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 191804902 + NM_014905 GLS 1 0.22 0.13 7 6.62 78.03 35 5.28 No 22 0.39 No 0 0 No -25 0.71 Yes 45 74.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191824382 + NM_014905 GLS 1 0.43 0.51 21 8.59 85.43 22 5.45 No 3 1.32 Yes 0 0 No -21 0.76 Yes 49 90.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 191825286 + NM_014905 GLS 1 0.27 0.33 17 7.95 86.87 31 7.85 Yes 18 1.45 Yes 0 0 No -30 0.78 Yes 40 75.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 191826562 + NM_014905 GLS 1 0.09 0.13 7 0.72 62.93 54 5.9 Yes -1 0.42 No 0 0 No -35 0.45 No 35 34.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56868919 - NM_001280798 GLS2 1 0.62 0.25 12 3.89 70.45 42 7.28 Yes 57 0.79 Yes 27 0.73 Yes -41 0.44 No 29 85.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 56868968 - NM_001280798 GLS2 1 3.53 1 33 7.76 95.76 21 4.8 No 8 0.77 No 20 0.91 Yes -20 0.87 Yes 50 90.37 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52729045 - NM_001278281 GLT8D1 1 0.19 0.26 15 -2.21 0 17 3.99 No 54 0.16 No 0 0 No -39 0.46 No 31 64.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52729246 - NM_001278281 GLT8D1 1 1.16 1.31 53 7.51 85.62 37 6.29 Yes 6 0.4 No 0 0 No -18 0.55 No 39 52.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52729571 - NM_001278281 GLT8D1 1 0.66 0.4 24 2.27 67.02 27 6.47 Yes 49 0.11 No 0 0 No -24 0.55 No 59 42.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52731586 - NM_001278281 GLT8D1 1 0.93 0.96 38 6.85 88.25 16 5.61 Yes 3 0.83 Yes 26 0.55 Yes -28 0.34 No 43 49.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52732695 - NM_001278281 GLT8D1 1 0.83 1.11 46 4.58 84.41 28 5.47 No 15 1.76 Yes 0 0 No -27 0.8 Yes 43 95.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52737715 - NM_001278281 GLT8D1 1 1.19 0.21 13 9.07 92.41 28 5.66 Yes 15 0.15 No 0 0 No -27 0.69 Yes 43 92.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52737945 - NM_001278281 GLT8D1 1 2.39 0.4 22 3.79 80.91 11 4.14 No 66 0.55 No 25 0.81 Yes -25 0.37 No 45 47.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 110289049 - NM_016433 GLTP 1 0.43 0.47 24 10.5 88.25 34 4.18 No 11 1.02 Yes 0 0 No -23 0.76 Yes 47 73.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110289152 - NM_016433 GLTP 1 0.4 0.43 26 10.82 92.06 68 8.37 Yes NA NA NA 0 0 No -34 0.24 No 36 38.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110290539 - NM_016433 GLTP 1 2.38 2.56 65 2.71 0 40 7.55 Yes 27 2.48 Yes 0 0 No -39 0.88 Yes 31 96.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110290660 - NM_016433 GLTP 1 0.11 0.13 8 2.59 57.95 45 7.39 Yes 53 1.6 Yes 0 0 No -44 0.74 Yes 26 84.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110293544 - NM_016433 GLTP 1 0.17 0.19 11 4.88 0 19 4.58 No 46 1.64 Yes 18 0.86 Yes -18 0.86 Yes 52 92.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110295999 - NM_016433 GLTP 1 1.02 1.08 42 10.62 88.05 32 5.68 Yes 49 0.75 No 31 0.74 Yes -31 0.89 Yes 39 89.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48176986 + NM_015711 GLTSCR1 1 0.86 0.25 17 4.35 0 9 4.36 No 65 1.56 Yes 0 0 No -35 0.82 Yes 35 94.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48176953 + NM_015711 GLTSCR1 1 0.49 0.18 9 6.5 83.05 19 3.79 No 62 2.25 Yes 25 0.94 Yes -44 0.91 Yes 26 82.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48180049 + NM_015711 GLTSCR1 1 0.53 0.14 9 6.53 90.99 27 5.7 Yes 6 0.19 No 0 0 No -26 0.73 Yes 44 70.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48180182 + NM_015711 GLTSCR1 1 1.24 0.4 19 3.83 83.7 21 4.67 No 25 1 Yes 0 0 No -20 0.71 Yes 50 79.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48197920 + NM_015711 GLTSCR1 1 2.46 0.1 7 7.5 80.71 42 6.4 Yes 29 1.07 Yes 0 0 No -22 0.49 No 48 70.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 48198642 + NM_015711 GLTSCR1 1 5.89 0.42 23 9.88 86.92 30 5.47 No 47 1.66 Yes 0 0 No -29 0.65 No 41 34.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 48202610 + NM_015711 GLTSCR1 1 0.36 0.11 8 4.45 80.78 25 4.37 No 69 0.56 No 0 0 No -24 0.62 No 46 64.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42790171 + NM_001318819 GLTSCR1L 1 4.61 1.79 55 9.81 88.27 28 7.68 Yes 15 1.47 Yes 0 0 No -27 0.95 Yes 43 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42790535 + NM_001318819 GLTSCR1L 1 0.48 0.18 10 -0.27 81.15 29 7.48 Yes 46 0.75 No 0 0 No -28 0.63 No 42 61.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42821380 + NM_001318819 GLTSCR1L 1 0.26 0.1 7 -0.91 0 61 6.94 Yes -3 0.38 No 0 0 No -23 0.74 Yes 47 70.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48249465 + NM_015710 GLTSCR2 1 0.06 0.46 20 6.95 88.11 131 10.31 Yes NA NA NA 23 0.42 Yes -25 0.4 No 43 47.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 48254755 + NM_015710 GLTSCR2 1 0.03 0.21 13 3.31 74.88 22 6.86 Yes 59 0.84 Yes 26 0.86 Yes -29 0.66 Yes 49 72.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48260235 + NM_015710 GLTSCR2 1 0.17 1.19 48 7.36 77.42 13 6.4 Yes 0 1.84 Yes 22 0.91 Yes -27 0.4 No 43 41.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 48260262 + NM_015710 GLTSCR2 1 0.07 0.46 23 0.66 0 10 4 No 27 2.12 Yes 22 0.91 Yes -29 0.85 Yes 41 92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 88820349 - NM_005271 GLUD1 1 0.08 0.26 17 8.21 83.72 25 5.14 No 12 1.26 Yes 0 0 No -24 0.92 Yes 46 93.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 88820553 - NM_005271 GLUD1 1 0.04 0.22 15 4.24 74.31 29 5.46 No 63 -5.96 No 0 0 No -29 0.68 Yes 41 64.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 88827600 - NM_005271 GLUD1 1 0.15 0.58 26 5.82 75.56 32 5.08 No 29 0.61 No 34 0.79 Yes -31 0.86 Yes 39 91.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 88829265 - NM_005271 GLUD1 1 0.06 0.21 12 8.59 88.56 29 5.62 Yes 16 1.32 Yes 0 0 No -28 0.56 No 42 55.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88830413 - NM_005271 GLUD1 1 0.13 0.43 24 4.74 77.6 23 6.97 Yes 21 0.39 No 0 0 No -22 0.79 Yes 48 80.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 88849546 - NM_005271 GLUD1 1 0.15 0.21 12 8.41 90.18 40 4.4 No 46 1.41 Yes 28 0.61 Yes -28 0.72 Yes 42 68.44 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 88851381 - NM_005271 GLUD1 1 0.25 0.36 19 9.04 91.04 34 7.38 Yes 52 1.65 Yes 29 0.7 Yes -29 0.47 No 37 51.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 88852412 - NM_005271 GLUD1 1 0.21 0.31 18 9.5 87.19 38 5.91 Yes 13 1.15 Yes 25 0.81 Yes -25 0.85 Yes 45 67.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 182355536 - NM_001033056 GLUL 1 0.07 0.1 7 -3.11 83.21 17 4.97 No 4 1.58 Yes 0 0 No -30 0.85 Yes 40 89.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52327061 + NR_026699 GLYCTK 1 2.01 0.5 25 10.01 91.68 30 5.07 No 13 1.3 Yes 25 0.95 Yes -25 0.91 Yes 45 94.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52327322 + NR_026699 GLYCTK 1 0.65 0.15 9 7.4 88.23 33 6.24 Yes 37 1.4 Yes 32 0.84 Yes -32 0.92 Yes 38 95.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4863957 - NM_001324096 GLYR1 1 1.22 2.28 60 11.82 89.12 25 6.87 Yes 73 1.04 Yes 24 0.91 Yes -24 0.96 Yes 46 95.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4864649 - NM_001324096 GLYR1 1 1185.1 196.53 72 6.21 83.43 26 5.2 No -2 0.36 No 25 0.93 Yes -25 0.96 Yes 45 97.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4864649 - NM_001324096 GLYR1 1 1.32 0.25 12 6.21 83.43 26 5.2 No -2 0.36 No 25 0.93 Yes -25 0.96 Yes 45 97.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4867934 - NM_001324096 GLYR1 1 0.11 0.21 13 7.87 89.79 33 6.93 Yes 20 0.77 Yes 28 0.27 Yes -22 0.34 No 44 41.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 4871581 - NM_001324096 GLYR1 1 0.15 0.4 19 4.61 88.03 24 4.78 No 67 -2.82 No 0 0 No -23 0.85 Yes 47 89.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4871595 - NM_001324096 GLYR1 1 0.09 0.21 13 2.24 0 33 6 Yes 53 -2.81 No 0 0 No -35 0.53 No 35 76.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 4882223 - NM_001324096 GLYR1 1 1085.99 225.39 72 5.69 82.52 26 5.42 No 4 -1.95 No 25 0.77 Yes -25 0.72 Yes 48 68.06 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 4890867 - NM_001324096 GLYR1 1 0.03 0.11 8 9.33 87.32 22 5.92 Yes 52 0.24 No 0 0 No -21 0.58 No 39 63.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 4893600 - NM_001324096 GLYR1 1 0.06 0.18 11 -0.52 0 41 6.2 Yes 57 0.09 No 0 0 No -33 0.58 No 37 66.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 4893604 - NM_001324096 GLYR1 1 0.88 3.08 66 8.41 91.22 37 5.88 Yes 53 0.09 No 29 0.67 Yes -29 0.66 No 41 69.17 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 4895185 - NM_001324096 GLYR1 1 0.04 0.15 8 2.08 78.45 29 5.29 No 73 0.68 No 28 0.68 Yes -23 0.68 Yes 47 57.03 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 150646561 + NM_000405 GM2A 1 0.12 0.46 25 11.12 90.38 17 5.74 Yes 48 -1.64 No 0 0 No -31 0.59 No 39 69.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 150649710 + NM_000405 GM2A 1 0.18 0.64 27 6.35 86.61 23 5.23 No 41 0.14 No 0 0 No -22 0.75 Yes 48 63.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 70066605 + NM_178439 GMCL1 1 0.34 0.13 7 3.45 74.04 20 4.67 No 24 1.75 Yes 0 0 No -43 0.51 No 27 46.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 70067188 + NM_178439 GMCL1 1 1.47 0.79 37 9.94 84.63 14 3.96 No 1 0.98 Yes 23 0.82 Yes -23 0.92 Yes 47 90.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 70068615 + NM_178439 GMCL1 1 0.45 0.19 12 5.83 79.02 29 6.82 Yes 42 -2.19 No 0 0 No -28 0.41 No 42 41.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 70070219 + NM_178439 GMCL1 1 2.64 1.21 40 2.04 62.8 62 7.63 Yes 46 1.22 Yes 0 0 No -61 0.54 No 12 43.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 70071831 + NM_178439 GMCL1 1 0.81 0.46 25 2.49 65.95 74 8.07 Yes 19 1.09 Yes 0 0 No -23 0.52 No 39 67.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 70092503 + NM_178439 GMCL1 1 0.2 0.13 8 8.21 93.82 17 5.41 No 4 0.92 Yes 0 0 No -28 0.65 No 42 73.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 70094830 + NM_178439 GMCL1 1 0.77 0.5 27 1.48 73.95 62 12.93 Yes 7 1.21 Yes 0 0 No -28 0.72 Yes 42 88.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 70100718 + NM_178439 GMCL1 1 0.41 0.24 13 4.26 83.26 19 5.37 No 75 1.82 Yes 0 0 No -28 0.68 Yes 42 62.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 70101898 + NM_178439 GMCL1 1 0.49 0.29 18 6.12 0 26 6.24 Yes 67 1.25 Yes 0 0 No -34 0.54 No 38 62.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 1661561 - NM_001253846 GMDS 1 0.23 0.18 10 2.99 71.68 25 4.41 No 66 0.83 Yes 0 0 No -24 0.91 Yes 46 92.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 1689519 - NM_001253846 GMDS 1 0.3 0.28 15 5.86 81.01 33 7.19 Yes 2 1.19 Yes 0 0 No -27 0.64 No 38 67.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 1690809 - NM_001253846 GMDS 1 2.78 2.35 62 11.02 79 23 6.08 Yes 71 0.35 No 0 0 No -28 0.55 No 47 69.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 1717878 - NM_001253846 GMDS 1 0.71 0.64 30 8.43 85.52 42 8.59 Yes 29 1.74 Yes 28 0.46 Yes -28 0.46 No 42 55.66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 1766686 - NM_001253846 GMDS 1 0.48 0.32 20 8.11 80.8 30 5.58 Yes 11 0.79 Yes 0 0 No -23 0.83 Yes 47 91.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 1796486 - NM_001253846 GMDS 1 0.46 0.32 18 4.38 75.95 38 6.32 Yes 46 0.62 No 0 0 No -37 0.94 Yes 33 98.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 1822239 - NM_001253846 GMDS 1 1.28 0.85 42 12.25 100 24 5.29 No 65 -3.48 No 0 0 No -23 0.88 Yes 47 96.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 1822239 - NM_001253846 GMDS 1 0.23 0.15 9 12.25 100 24 5.29 No 65 -3.48 No 0 0 No -23 0.88 Yes 47 96.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 1831660 - NM_001253846 GMDS 1 0.23 0.15 10 3.55 68.25 28 7.46 Yes 65 0.98 Yes 0 0 No -19 0.64 No 38 60.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 1910222 - NM_001253846 GMDS 1 3.31 2.19 54 5.08 88.04 31 5.46 No 54 0.55 No 0 0 No -23 0.55 No 47 64.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 1910222 - NM_001253846 GMDS 1 0.35 0.21 10 5.08 88.04 31 5.46 No 54 0.55 No 0 0 No -23 0.55 No 47 64.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 1920552 - NM_001253846 GMDS 1 0.32 0.22 13 10.11 94.82 29 5.08 No 12 0.54 No 0 0 No -28 0.49 No 42 57.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 1928107 - NM_001253846 GMDS 1 0.19 0.14 9 10.74 84.37 48 5.82 Yes 47 0.68 No 0 0 No -34 0.78 Yes 36 80.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 1952364 - NM_001253846 GMDS 1 0.25 0.25 17 9.93 86.46 28 5.16 No 73 0.84 Yes 0 0 No -28 0.63 No 42 43.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 1955185 - NM_001253846 GMDS 1 0.15 0.17 9 7.67 87.49 33 6.24 Yes 20 1.09 Yes 0 0 No -32 0.59 No 38 77.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 1971992 - NM_001253846 GMDS 1 0.18 0.18 12 5.87 77.23 40 8.34 Yes 75 0.76 No 0 0 No -27 0.54 No 41 45.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 2002525 - NM_001253846 GMDS 1 0.18 0.18 12 10.69 85.45 36 6.23 Yes 75 1.79 Yes 0 0 No -28 0.26 No 39 65.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 2054436 - NM_001253846 GMDS 1 0.28 0.25 15 10.13 83.67 11 6.7 Yes 41 0.03 No 0 0 No -25 0.65 No 45 82.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 2060563 - NM_001253846 GMDS 1 0.29 0.26 18 9.99 77.34 29 5.83 Yes 64 0.19 No 0 0 No -28 0.88 Yes 42 87.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 2109631 - NM_001253846 GMDS 1 0.36 0.32 17 9.15 82.8 22 6.4 Yes 3 1.72 Yes 0 0 No -21 0.88 Yes 49 83.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 2257709 + NR_046229 GMDS-AS1 1 3.22 0.56 22 6.8 78.18 39 7.82 Yes 26 0.45 No 0 0 No -32 0.69 Yes 32 48.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 29010097 + NM_006582 GMEB1 1 35.38 3.04 64 2.54 72.66 32 5.06 No 40 1.28 Yes 24 0.71 Yes -27 0.69 Yes 43 76.42 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 29016615 + NM_006582 GMEB1 1 1.36 0.13 8 4.32 86.41 37 6.24 Yes 39 0.59 No 0 0 No -36 0.82 Yes 47 63.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 29016615 + NM_006582 GMEB1 1 540.23 50.38 72 4.32 86.41 37 6.24 Yes 39 0.59 No 0 0 No -36 0.82 Yes 47 63.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 62223469 - NM_012384 GMEB2 1 3.5 0.86 40 2.91 69.89 32 5.88 Yes 43 0.72 No 0 0 No -29 0.33 No 38 49.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62223625 - NM_012384 GMEB2 1 2.74 0.69 35 10.61 86.18 25 5.57 Yes 68 0.81 Yes 0 0 No -24 0.88 Yes 46 94.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62228775 - NM_012384 GMEB2 1 0.24 0.13 8 3.34 74.65 25 7.24 Yes 75 -3.65 No 0 0 No -24 0.97 Yes 46 96.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62233451 - NM_012384 GMEB2 1 0.96 0.49 26 4.2 0 16 4.57 No 21 1.05 Yes 0 0 No -22 0.82 Yes 48 71.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62234441 - NM_012384 GMEB2 1 3.82 1.17 47 -9.11 0 11 4.12 No 36 1.71 Yes 0 0 No -48 0.53 No 18 76.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 62234449 - NM_012384 GMEB2 1 1.21 0.33 18 -2.2 63.2 41 7.35 Yes 28 1.73 Yes 30 0.71 Yes -40 0.64 No 30 69.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 54945702 - NM_004124 GMFB 1 0.05 0.11 8 5.8 80.38 25 4.38 No 38 0.59 No 0 0 No -33 0.74 Yes 37 89.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 54947676 - NM_004124 GMFB 1 0.67 1.19 49 -13.24 0 28 5.39 No 15 1.51 Yes 22 0.9 Yes -12 0.61 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 54948916 - NM_004124 GMFB 1 0.04 0.1 7 -0.35 0 26 4.68 No 13 1.19 Yes 0 0 No -29 0.71 Yes 45 82.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19741190 - NM_016573 GMIP 1 0.45 0.36 21 -1.47 60.91 28 5.58 Yes 67 -2.61 No 0 0 No -27 0.54 No 43 75.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 19743076 - NM_016573 GMIP 1 1.22 0.93 38 6.69 93.18 16 4 No 3 0.26 No 0 0 No -27 0.48 No 45 78.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 19747597 - NM_016573 GMIP 1 26.6 17.5 72 -4.65 0 16 4.19 No 16 -1.82 No 19 0.72 Yes -28 0.66 Yes 42 69.44 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 19748611 - NM_016573 GMIP 1 0.37 0.13 8 4.07 85.23 26 3.98 No 53 1.17 Yes 0 0 No -19 0.56 No 48 45.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19751040 - NM_016573 GMIP 1 0.87 1.22 51 12.31 87.95 18 5.65 Yes 61 -2.63 No 32 0.77 Yes -23 0.61 No 47 65.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 24780895 + NM_001251991 GMNN 1 0.21 0.33 23 -0.29 0 36 5.86 Yes 2 1.87 Yes 0 0 No -35 0.58 No 43 49.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 24781714 + NM_001251991 GMNN 1 0.61 1.64 52 3.84 0 18 3.77 No 52 0.83 Yes 0 0 No -26 0.43 No 44 51.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 24785867 + NM_001251991 GMNN 1 0.23 0.26 14 -8.42 68.19 27 6.5 Yes 28 0.83 Yes 0 0 No -30 0.54 No 40 58.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220364677 + NM_205847 GMPPA 1 53.67 17.83 72 3.65 64.8 23 4.56 No 16 1.04 Yes 28 0.91 Yes -28 0.87 Yes 42 83.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 220365029 + NM_205847 GMPPA 1 0.13 0.21 15 7.41 89.1 87 8.9 Yes 52 1.99 Yes 0 0 No -42 0.61 No 22 54.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220366633 + NM_205847 GMPPA 1 1.53 1.79 61 2.31 0 18 6.11 Yes 5 -1.28 No 0 0 No -33 0.62 No 37 37.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 220367735 + NM_205847 GMPPA 1 0.08 0.13 8 7.82 95.63 15 5.15 No 66 1.37 Yes 0 0 No -26 0.63 No 44 49.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220370321 + NM_205847 GMPPA 1 0.62 0.63 28 6.79 77.95 21 6.71 Yes 8 2.24 Yes 0 0 No -20 0.64 No 50 83.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 220370416 + NM_205847 GMPPA 1 1.37 1.47 55 7.97 88.99 32 5.27 No 76 0.95 Yes 31 0.79 Yes -31 0.82 Yes 39 94.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 49759305 - NM_021971 GMPPB 1 0.2 0.24 17 -16.64 0 19 4.58 No 23 1.4 Yes 0 0 No -35 0.92 Yes 35 84.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49759938 - NM_021971 GMPPB 1 0.11 0.14 10 -1.93 0 11 3.87 No 24 1.5 Yes 0 0 No -27 0.96 Yes 43 93.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49760481 - NM_021971 GMPPB 1 0.11 0.22 14 9.26 83.15 32 5.57 Yes 74 1.89 Yes 0 0 No -24 0.83 Yes 46 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49760902 - NM_021971 GMPPB 1 0.74 0.96 43 1.58 0 38 6.21 Yes 25 1.55 Yes 29 0.88 Yes -37 0.64 No 33 61.54 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 24703312 + NM_001283022 GMPR2 1 5.91 7.14 72 6.06 77.53 50 6.4 Yes 6 0.89 Yes 18 0.23 Yes -30 0.52 No 40 75.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 24703318 + NM_001283022 GMPR2 1 0.53 0.6 32 3.75 0 9 2.96 No 12 0.87 Yes 18 0.23 Yes -24 0.57 No 34 70.01 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 24706247 + NM_001283022 GMPR2 1 1.24 1.04 33 7.09 80.65 33 6.51 Yes 10 1.15 Yes 22 0.72 Yes -32 0.61 No 38 74.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 24707794 + NM_001283022 GMPR2 1 3.46 2.85 63 4.56 80.38 23 4.52 No 7 0.35 No 22 0.74 Yes -22 0.61 No 50 59.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 155605220 + NM_003875 GMPS 1 0.2 0.28 19 6.24 69.39 40 7.08 Yes 71 0.73 No 0 0 No -31 0.47 No 40 48.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 155608430 + NM_003875 GMPS 1 0.32 0.49 27 7.55 90.13 62 7.85 Yes 49 0.32 No 0 0 No -21 0.71 Yes 51 60.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 155608456 + NM_003875 GMPS 1 0.24 0.33 16 5.61 65.33 22 5.57 Yes 75 0.3 No 0 0 No -21 0.75 Yes 49 78.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 155622099 + NM_003875 GMPS 1 0.04 0.1 7 5.52 84.41 33 4.79 No 72 1.02 Yes 0 0 No -38 0.54 No 41 58.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 155622827 + NM_003875 GMPS 1 0.1 0.21 14 1.39 83.95 20 4.86 No 56 0.51 No 0 0 No -32 0.5 No 38 60.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 155628585 + NM_003875 GMPS 1 0.27 0.68 34 5.32 75.32 29 4.13 No 10 0.5 No 0 0 No -22 0.38 No 48 54.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 155643047 + NM_003875 GMPS 1 0.07 0.21 14 2.88 80.67 21 5.13 No 8 0.61 No 0 0 No -45 0.74 Yes 25 69.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 2854024 - NM_007353 GNA12 1 0.64 0.51 25 8.28 87.19 29 4.67 No 35 1.41 Yes 28 0.54 Yes -26 0.67 Yes 44 65.75 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 2878758 - NM_007353 GNA12 1 0.3 0.26 15 9.09 82.14 38 6 Yes 75 0.66 No 0 0 No -27 0.68 Yes 33 70.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 63010760 - NM_001282425 GNA13 1 0.13 0.43 24 5.6 78.76 30 6.46 Yes 17 0.93 Yes 0 0 No -27 0.63 No 41 71.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 63010963 - NM_001282425 GNA13 1 0.04 0.15 9 -7.4 0 17 4.58 No 40 -4.17 No 23 0.59 Yes -16 0.71 Yes 21 28.22 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 63012159 - NM_001282425 GNA13 1 0.09 0.32 17 4.96 95.57 24 4.9 No 11 1.01 Yes 0 0 No -23 0.89 Yes 47 91.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 63014071 - NM_001282425 GNA13 1 0.04 0.17 9 8.96 86.35 38 5.79 Yes -3 1.21 Yes 0 0 No -34 0.59 No 36 71.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 63017068 - NM_001282425 GNA13 1 0.06 0.13 9 7.28 86.72 47 5.24 No 34 0.67 No 0 0 No -24 0.35 No 36 17.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 63018454 - NM_001282425 GNA13 1 0.11 0.22 14 6.08 81.79 16 4.96 No 3 1.03 Yes 0 0 No -23 0.78 Yes 47 74.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 63028361 - NM_001282425 GNA13 1 0.09 0.17 10 7.4 80.86 30 6.51 Yes 17 0.91 Yes 0 0 No -29 0.9 Yes 41 89.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 63042742 - NM_001282425 GNA13 1 0.09 0.21 13 10.19 88.95 26 6.93 Yes 13 0.75 No 0 0 No -25 0.85 Yes 45 77.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3162573 + NM_002068 GNA15 1 0.21 0.17 8 10 89.29 16 5.74 Yes 66 0 No 0 0 No -26 0.47 No 44 53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 50293000 + NM_001166425 GNAI2 1 0.04 0.31 19 9.3 81.13 32 6.7 Yes 19 1.5 Yes 0 0 No -31 0.87 Yes 39 95.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50295455 + NM_001166425 GNAI2 1 0.45 2.54 70 9.08 87.08 18 5.74 Yes 5 1.57 Yes 0 0 No -17 0.59 No 53 67.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 110127243 + NM_006496 GNAI3 1 0.16 0.58 24 11.67 86.05 28 4.85 No 25 0.34 No 0 0 No -30 0.68 Yes 40 84.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 110134975 + NM_006496 GNAI3 1 0.02 0.11 7 -0.04 0 12 4.24 No 49 1.29 Yes 0 0 No -33 0.95 Yes 37 94.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1719040 - NM_002074 GNB1 1 0.19 1.31 48 3.73 80.88 24 5.19 No 12 -2.79 No 0 0 No -23 0.9 Yes 47 81.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1722034 - NM_002074 GNB1 1 0.01 0.13 7 -13.14 0 33 6.68 Yes 20 1.87 Yes 0 0 No -32 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 1722042 - NM_002074 GNB1 1 0.05 0.54 29 -0.14 0 25 6.05 Yes 12 1.86 Yes 30 0.87 Yes -24 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 1722048 - NM_002074 GNB1 1 0.03 0.39 22 -3.64 0 19 5.53 No 6 1.77 Yes 30 0.87 Yes -18 0.45 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 1723207 - NM_002074 GNB1 1 0.02 0.19 11 8.43 85.58 25 6.31 Yes 34 1.03 Yes 0 0 No -24 0.7 Yes 46 54.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 1723972 - NM_002074 GNB1 1 0.01 0.15 9 4.27 92.4 17 5.29 No 4 1.04 Yes 0 0 No -25 0.37 No 54 64.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1746917 - NM_002074 GNB1 1 0.01 0.15 9 12.56 85.99 46 5.53 No 21 1.75 Yes 0 0 No -33 0.85 Yes 37 85.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1747798 - NM_002074 GNB1 1 0.01 0.13 8 6.2 78.35 21 4.69 No 35 1.13 Yes 0 0 No -20 0.63 No 46 59.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1752755 - NM_002074 GNB1 1 0.02 0.17 11 3.36 71.51 32 6.33 Yes 58 0.1 No 0 0 No -31 0.51 No 39 56.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1752875 - NM_002074 GNB1 1 0.04 0.33 21 8.84 84.52 24 5.29 No 11 0.72 No 0 0 No -23 0.84 Yes 47 79.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1763922 - NM_002074 GNB1 1 0.28 1.64 51 6.57 79.87 21 4.09 No 27 1.24 Yes 0 0 No -24 0.54 No 45 53.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1764804 - NM_002074 GNB1 1 0.06 0.38 20 8.6 80.16 35 6.4 Yes 22 0.54 No 0 0 No -34 0.91 Yes 36 83.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1771122 - NM_002074 GNB1 1 0.14 0.26 15 8.61 85.02 24 7.34 Yes 11 2.02 Yes 23 0.92 Yes -23 0.94 Yes 47 94.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1779476 - NM_002074 GNB1 1 0.57 1.1 41 8.55 72.57 28 5.63 Yes 66 0.58 No 0 0 No -22 0.64 No 48 69.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 1779969 - NM_002074 GNB1 1 0.38 0.75 32 12.47 94.25 27 4.86 No 14 0.7 No 0 0 No -26 0.95 Yes 44 95.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1784120 - NM_002074 GNB1 1 0.15 0.29 18 7.39 84.56 23 6.08 Yes 10 1.3 Yes 0 0 No -22 0.88 Yes 48 85.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1784737 - NM_002074 GNB1 1 2.82 5.29 70 6.83 87.64 23 5.1 No 76 0.66 No 0 0 No -22 0.88 Yes 48 83.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1805558 - NM_002074 GNB1 1 0.08 0.14 9 3.41 74.23 21 4.9 No 40 0.22 No 0 0 No -20 0.87 Yes 50 81.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1811342 - NM_002074 GNB1 1 2.63 5 71 8.66 92.98 26 5.1 No 55 0.46 No 0 0 No -19 0.55 No 51 64.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1811359 - NM_002074 GNB1 1 0.06 0.11 7 -2.51 51.89 43 7 Yes 38 0.43 No 0 0 No -28 0.79 Yes 58 15.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 100275362 + NM_005273 GNB2 1 0.03 0.19 12 -2.2 68.58 24 4.8 No 64 -0.95 No 19 0.64 Yes -32 0.49 No 65 17.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 52420893 - NM_006578 GNB5 1 0.68 0.18 12 11.45 88.09 16 3.93 No -3 0.54 No 21 0.31 Yes -21 0.67 Yes 49 75.74 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 52441964 - NM_006578 GNB5 1 0.47 0.15 10 2.18 71.14 29 7.42 Yes 16 1.14 Yes 0 0 No -28 0.83 Yes 42 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 52418604 + NM_001243774 GNG2 1 0.17 0.21 14 9.68 87.04 28 6.24 Yes 15 0.65 No 27 0.8 Yes -27 0.75 Yes 43 79.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 52430159 + NM_001243774 GNG2 1 0.07 0.11 7 7.1 75.71 26 6.54 Yes 13 1.38 Yes 0 0 No -25 0.67 Yes 41 52.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2517081 - NM_052847 GNG7 1 1.12 0.79 37 11.85 91.66 35 8.13 Yes 38 1.42 Yes 20 0.52 Yes -34 0.71 Yes 36 88.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2520395 - NM_052847 GNG7 1 0.89 0.65 37 8.35 83.01 26 5.13 No 13 1.85 Yes 0 0 No -25 0.92 Yes 45 92.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2530942 - NM_052847 GNG7 1 0.27 0.17 10 8.94 91.47 21 4.79 No 65 1.73 Yes 0 0 No -20 0.91 Yes 50 94.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2538455 - NM_052847 GNG7 1 1.71 1.07 44 11.6 95.65 27 6.24 Yes 14 1.55 Yes 0 0 No -26 0.95 Yes 44 95.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2675626 - NM_052847 GNG7 1 0.49 0.18 12 12.08 89.81 26 7.68 Yes 69 0.74 No 0 0 No -25 0.85 Yes 45 84.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2683732 - NM_052847 GNG7 1 0.52 0.19 12 12.75 89.41 23 5.59 Yes 15 0.79 Yes 18 0.84 Yes -27 0.55 No 48 60.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 38047937 - NM_001323623 GNL2 1 0.07 0.18 11 -9.21 0 30 6.23 Yes 54 1.38 Yes 0 0 No -26 0.43 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 38049383 - NM_001323623 GNL2 1 0.4 0.94 37 4.67 69.85 18 5.74 Yes 61 0.89 Yes 0 0 No -17 0.52 No 53 75.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 38054684 - NM_001323623 GNL2 1 0.2 0.64 27 8.06 78.68 36 7.07 Yes 23 1.36 Yes 0 0 No -35 0.97 Yes 35 97.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52727206 + NM_206825 GNL3 1 0.93 3.92 70 -0.99 0 39 6.24 Yes 47 -2.49 No 0 0 No -32 0.46 No 36 69.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52727227 + NM_206825 GNL3 1 0.05 0.17 10 3.46 82.36 17 5.45 No 16 -3.08 No 0 0 No -28 0.53 No 43 41.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52727434 + NM_206825 GNL3 1 0.03 0.21 11 -2.13 0 19 4.47 No 22 1.07 Yes 0 0 No -34 0.69 Yes 36 79.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 54557994 + NM_001184819 GNL3L 1 0.43 0.64 28 5.71 88.07 21 4.8 No 67 0.14 No 0 0 No -18 0.59 No 52 54.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 54558879 + NM_001184819 GNL3L 1 0.43 0.63 35 8.19 87.81 46 7.47 Yes 3 0.98 Yes 0 0 No -28 0.91 Yes 42 94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 54558956 + NM_001184819 GNL3L 1 0.51 0.79 32 -5.87 0 48 6.08 Yes -4 0.81 Yes 0 0 No -31 0.78 Yes 39 84.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 54563480 + NM_001184819 GNL3L 1 0.49 0.75 34 2.3 84.41 25 7.35 Yes 12 1.44 Yes 0 0 No -24 0.88 Yes 46 90.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 54563484 + NM_001184819 GNL3L 1 1.14 1.82 59 4.19 0 29 7.61 Yes 16 1.42 Yes 0 0 No -28 0.89 Yes 42 90.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 54563643 + NM_001184819 GNL3L 1 0.58 0.86 38 6.02 87.79 24 6.6 Yes 7 0.65 No 0 0 No -23 0.9 Yes 47 89.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 54565432 + NM_001184819 GNL3L 1 0.07 0.13 7 4.43 65.03 28 5.44 No 53 0.53 No 33 0.54 Yes -27 0.67 Yes 43 64.52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 54567658 + NM_001184819 GNL3L 1 0.12 0.22 12 9.18 79.08 91 11.46 Yes 5 1.12 Yes 0 0 No -36 0.45 No 34 74.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 54569423 + NM_001184819 GNL3L 1 0.05 0.14 9 5.78 82.57 16 5.45 No 26 -2.82 No 0 0 No -23 0.7 Yes 47 69.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 54569578 + NM_001184819 GNL3L 1 0.15 0.29 16 6.93 98.09 24 4.9 No 15 1.17 Yes 0 0 No -23 0.78 Yes 47 68.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 54576798 + NM_001184819 GNL3L 1 0.67 1.07 38 10.55 92.14 26 5.66 Yes 74 -2.6 No 0 0 No -25 0.92 Yes 45 95.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 54577068 + NM_001184819 GNL3L 1 0.12 0.19 13 7 81.06 26 5.29 No 45 1.1 Yes 0 0 No -29 0.4 No 45 64.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 54580732 + NM_001184819 GNL3L 1 0.16 0.39 20 6.99 77.63 25 5.39 No 40 -3.42 No 0 0 No -24 0.64 No 46 86.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 231386709 + NM_014236 GNPAT 1 4.75 5 71 -0.1 74.92 28 6.46 Yes 37 1.07 Yes 0 0 No -27 0.95 Yes 43 90.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 231393967 + NM_014236 GNPAT 1 0.41 0.6 28 9.2 92.15 47 5.97 Yes 34 1.49 Yes 0 0 No -27 0.48 No 43 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 231393967 + NM_014236 GNPAT 1 1.94 2.78 56 9.2 92.15 47 5.97 Yes 34 1.49 Yes 0 0 No -27 0.48 No 43 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 231401491 + NM_014236 GNPAT 1 1.01 1.74 57 6.62 85.74 16 5.93 Yes 3 0.48 No 0 0 No -27 0.79 Yes 43 66.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 231405608 + NM_014236 GNPAT 1 0.25 0.6 29 10.32 94.63 37 6.16 Yes 47 0.54 No 36 0.62 Yes -31 0.79 Yes 39 89.8 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 231406662 + NM_014236 GNPAT 1 0.05 0.11 8 5.29 76.64 35 5.77 Yes -2 0.38 No 0 0 No -27 0.73 Yes 43 83.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 231409888 + NM_014236 GNPAT 1 0.29 0.36 21 7.44 83.36 20 4.85 No 7 1.89 Yes 0 0 No -19 0.26 No 51 44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 231409913 + NM_014236 GNPAT 1 0.34 0.46 24 3 86.82 22 4.69 No 32 1.83 Yes 0 0 No -44 0.45 No 49 50.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 231411881 + NM_014236 GNPAT 1 0.09 0.15 9 -11.58 0 26 4.45 No 10 0.51 No 0 0 No -26 0.4 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 141382780 - NM_005471 GNPDA1 1 0.25 0.14 8 1.43 76.21 24 5.2 No 11 0.83 Yes 23 0.97 Yes -23 0.96 Yes 47 96.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 141391905 - NM_005471 GNPDA1 1 4.15 0.65 30 6.59 80.18 33 5.91 Yes 71 0.77 Yes 21 0.71 Yes -21 0.78 Yes 49 83.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 44705182 - NR_073095 GNPDA2 1 0.26 0.18 13 -1.18 49.46 31 5.48 No 59 0.84 Yes 28 0.56 Yes -14 0.42 No 56 31.7 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 44707509 - NR_073095 GNPDA2 1 1.45 0.89 41 4.14 70.63 33 5.74 Yes 30 -3.85 No 0 0 No -32 0.74 Yes 38 93.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 53245568 - NM_198066 GNPNAT1 1 0.92 1.24 48 6.66 86.24 18 6.99 Yes 5 1.19 Yes 0 0 No -28 0.67 Yes 42 57.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 53245568 - NM_198066 GNPNAT1 1 0.08 0.13 9 6.66 86.24 18 6.99 Yes 5 1.19 Yes 0 0 No -28 0.67 Yes 42 57.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 53245727 - NM_198066 GNPNAT1 1 0.17 0.26 17 1.94 0 39 7.09 Yes 26 0.53 No 0 0 No -27 0.75 Yes 43 70.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 53245731 - NM_198066 GNPNAT1 1 0.33 0.46 25 5.8 84.22 35 6.81 Yes 22 0.56 No 0 0 No -23 0.7 Yes 47 60.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 53254590 - NM_198066 GNPNAT1 1 5.84 4.61 69 8.17 82.21 24 5.22 No 34 0.35 No 23 0.81 Yes -23 0.57 No 49 52.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 53257620 - NM_198066 GNPNAT1 1 0.4 0.29 21 10.39 87.84 32 5.81 Yes NA NA NA 0 0 No -22 0.52 No 48 78.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 102142967 - NM_024312 GNPTAB 1 0.07 0.11 8 -13.71 73.67 23 4.31 No 76 -4.61 No 0 0 No -29 0.85 Yes 41 92.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 102147864 - NM_024312 GNPTAB 1 0.31 0.54 29 9.7 87.64 34 6.93 Yes 21 1.16 Yes 0 0 No -33 0.96 Yes 37 97.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102150345 - NM_024312 GNPTAB 1 1.22 2.13 62 2.58 0 22 4.99 No 45 0.13 No 26 0.36 Yes -26 0.52 No 44 60.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 102158995 - NM_024312 GNPTAB 1 0.15 0.18 10 6.13 84.27 20 5.56 Yes 50 0.76 No 0 0 No -19 0.42 No 51 35.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 102164487 - NM_024312 GNPTAB 1 0.93 1.01 34 6.31 68.79 35 9.26 Yes 22 1.24 Yes 0 0 No -34 0.64 No 36 80.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 102164930 - NM_024312 GNPTAB 1 0.14 0.21 12 -0.35 0 11 3.78 No 14 1.1 Yes 0 0 No -33 0.85 Yes 37 91.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102165333 - NM_024312 GNPTAB 1 0.62 0.74 15 5.42 76.82 22 7 Yes 62 0.84 Yes 0 0 No -21 0.71 Yes 49 62.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 102180590 - NM_024312 GNPTAB 1 0.22 0.31 17 5 77.54 33 5.25 No 56 0.86 Yes 0 0 No -32 0.36 No 41 35.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 102182366 - NM_024312 GNPTAB 1 0.78 1.1 46 -0.19 81.37 28 5.58 Yes 12 0.5 No 0 0 No -27 0.34 No 43 56.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 102190041 - NM_024312 GNPTAB 1 2.34 3.31 66 11.92 93.08 23 6.59 Yes 49 1.02 Yes 0 0 No -25 0.66 Yes 45 86.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102192811 - NM_024312 GNPTAB 1 2.03 2.14 29 -0.41 62.57 42 7.04 Yes 40 0.73 No 0 0 No -34 0.59 No 26 54.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1402264 + NM_032520 GNPTG 1 0.3 0.11 7 8.41 90.73 22 5.76 Yes 32 2.56 Yes 0 0 No -21 0.46 No 49 54.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 1407700 + NM_032520 GNPTG 1 1.64 0.78 37 9.49 87.49 21 7.21 Yes 8 1.2 Yes 20 0.73 Yes -20 0.84 Yes 50 91.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 1411686 + NM_032520 GNPTG 1 0.18 0.11 8 -5.07 0 18 4.36 No 50 0.43 No 0 0 No -17 0.58 No 53 36.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1411695 + NM_032520 GNPTG 1 0.33 0.19 12 3.21 0 12 4.24 No 59 0.43 No 0 0 No -26 0.46 No 49 38.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1412470 + NM_032520 GNPTG 1 1.76 1.07 45 1.88 74.89 21 5.2 No 31 1.05 Yes 0 0 No -20 0.74 Yes 50 92.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 65110594 - NM_002076 GNS 1 0.58 0.68 36 2.4 0 9 3.87 No 21 1.32 Yes 0 0 No -33 0.78 Yes 37 74.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 65146719 - NM_002076 GNS 1 0.2 0.11 7 8.16 87.05 22 6.08 Yes 35 1.19 Yes 0 0 No -21 0.81 Yes 49 79.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 65150543 - NM_002076 GNS 1 0.41 0.22 11 9.42 85.56 24 5.38 No 11 0.15 No 23 0.86 Yes -23 0.9 Yes 47 91.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 127647757 - NM_002077 GOLGA1 1 1.62 0.4 24 3.01 0 30 9.75 Yes 17 1.02 Yes 0 0 No -29 0.73 Yes 41 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127651812 - NM_002077 GOLGA1 1 1.88 0.63 31 2.67 0 39 6.13 Yes 26 1.37 Yes 0 0 No -38 0.9 Yes 32 97.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127652754 - NM_002077 GOLGA1 1 0.37 0.13 7 -4.28 0 25 5.57 Yes 12 0.58 No 0 0 No -24 0.92 Yes 46 91.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127685052 - NM_002077 GOLGA1 1 1.82 0.53 28 8.84 86.43 21 6.65 Yes 49 -2.16 No 0 0 No -28 0.65 No 42 81.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 127691556 - NM_002077 GOLGA1 1 0.72 0.31 19 0.85 76.73 22 4.8 No 46 1.68 Yes 29 0.82 Yes -21 0.66 No 49 65.65 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 127701071 - NM_002077 GOLGA1 1 0.39 0.14 9 3.17 74.94 12 5.66 Yes 47 0.55 No 0 0 No -25 0.71 Yes 45 73.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131023064 - NM_004486 GOLGA2 1 0.45 0.15 10 5.08 76.89 16 5.18 No 3 1.09 Yes 20 0.84 Yes -20 0.88 Yes 50 72.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 131023251 - NM_004486 GOLGA2 1 1.06 0.4 20 -3.34 73.26 20 4.69 No 28 0.76 No 0 0 No -19 0.39 No 55 27.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 131029539 - NM_004486 GOLGA2 1 1.26 0.68 34 -1.2 67.79 18 4.69 No 68 2.09 Yes 0 0 No -42 0.4 No 29 30.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131035145 - NM_004486 GOLGA2 1 45.33 25.88 72 10.25 79.17 56 7.86 Yes 62 2.18 Yes 30 0.3 Yes -30 0.42 No 15 87.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 133349877 - NM_005895 GOLGA3 1 0.89 1.07 44 4.82 0 38 8.6 Yes 25 0.8 Yes 0 0 No -37 0.91 Yes 33 96.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133363174 - NM_005895 GOLGA3 1 0.36 0.43 17 -0.57 66.74 18 5.66 Yes 5 -0.53 No 34 0.8 Yes -25 0.4 No 53 41.4 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 133367465 - NM_005895 GOLGA3 1 1.04 1.21 50 2.18 83.57 25 7.48 Yes 12 1.35 Yes 0 0 No -24 0.94 Yes 46 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133372338 - NM_005895 GOLGA3 1 1.01 1.36 49 7.91 86.15 42 7.63 Yes 29 1.8 Yes 0 0 No -41 0.77 Yes 29 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133372932 - NM_005895 GOLGA3 1 0.12 0.17 8 7.33 93.53 36 7 Yes 23 2.14 Yes 0 0 No -35 0.9 Yes 35 90.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133373301 - NM_005895 GOLGA3 1 1.7 1.94 60 1.48 64.65 34 5.04 No 21 0.33 No 22 0.64 Yes -33 0.53 No 37 69.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 133384077 - NM_005895 GOLGA3 1 0.46 0.49 24 8.58 84.39 40 5.63 Yes 3 1.23 Yes 0 0 No -22 0.5 No 48 49.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133385131 - NM_005895 GOLGA3 1 0.09 0.15 8 2.69 0 33 7.81 Yes 20 0.86 Yes 0 0 No -32 0.62 No 38 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 133386827 - NM_005895 GOLGA3 1 0.15 0.28 15 1.82 0 29 5.83 Yes 54 -2.04 No 0 0 No -28 0.75 Yes 42 67.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 133388586 - NM_005895 GOLGA3 1 0.15 0.25 14 -2.5 84.41 28 8.42 Yes 15 1.32 Yes 0 0 No -27 0.64 No 43 77.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 133393469 - NM_005895 GOLGA3 1 0.19 0.28 16 9.43 84.64 33 5.95 Yes 20 0.79 Yes 0 0 No -32 0.96 Yes 38 98.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133401693 - NM_005895 GOLGA3 1 3.85 0.35 20 4.72 90.44 24 4.67 No 52 0.76 No 0 0 No -24 0.63 No 49 54.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133404300 - NM_005895 GOLGA3 1 9.76 0.72 32 8.83 91.08 21 5.77 Yes 8 0.84 Yes 23 0.76 Yes -23 0.53 No 50 38.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 133404489 - NM_005895 GOLGA3 1 151.72 11 72 8.03 85.05 29 5.23 No 12 1.26 Yes 24 0.95 Yes -24 0.96 Yes 46 97.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 37291188 + NM_001172713 GOLGA4 1 1.01 0.89 42 8.63 78.59 41 7.15 Yes 28 0.98 Yes 25 0.62 Yes -40 0.48 No 30 43.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 37308718 + NM_001172713 GOLGA4 1 2.35 1.96 58 10.03 90.64 18 6.48 Yes 5 2.42 Yes 0 0 No -23 0.94 Yes 47 94.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37323475 + NM_001172713 GOLGA4 1 0.17 0.18 12 1.11 0 21 4.58 No 8 0.68 No 0 0 No -20 0.91 Yes 50 93.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37321084 + NM_001172713 GOLGA4 1 0.31 0.33 17 4.97 75.7 55 7.89 Yes 42 1.79 Yes 0 0 No -45 0.73 Yes 16 78.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37323475 + NM_001172713 GOLGA4 1 1.02 1.07 46 1.11 0 21 4.58 No 8 0.68 No 0 0 No -20 0.91 Yes 50 93.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37323478 + NM_001172713 GOLGA4 1 0.12 0.13 7 -2.61 71.97 24 4.9 No 11 0.7 No 0 0 No -23 0.9 Yes 47 89.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37327514 + NM_001172713 GOLGA4 1 0.13 0.13 8 2.22 0 13 4.25 No 22 0.66 No 0 0 No -34 0.47 No 36 62.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37329513 + NM_001172713 GOLGA4 1 1.63 1.68 58 5.63 81.89 25 5.19 No 12 0.64 No 0 0 No -24 0.94 Yes 46 97.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37347444 + NM_001172713 GOLGA4 1 0.12 0.11 7 9.94 86.62 15 5.32 No 2 0.94 Yes 0 0 No -26 0.77 Yes 44 82.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37354921 + NM_001172713 GOLGA4 1 1.19 0.97 43 2.71 0 12 4.24 No 19 0.62 No 0 0 No -31 0.92 Yes 39 94.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37357355 + NM_001172713 GOLGA4 1 0.43 0.56 26 6.15 77 28 5.73 Yes 15 1.36 Yes 0 0 No -27 0.68 Yes 43 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37369910 + NM_001172713 GOLGA4 1 0.26 0.19 12 0.11 0 27 6.16 Yes 14 0.9 Yes 0 0 No -26 0.93 Yes 44 90.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37374476 + NM_001172713 GOLGA4 1 0.08 0.13 9 9.13 76.62 23 5.98 Yes 10 0.78 Yes 0 0 No -22 0.92 Yes 48 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37375879 + NM_001172713 GOLGA4 1 0.2 0.29 16 7.18 74.11 25 5.75 Yes 12 1.82 Yes 0 0 No -25 0.53 No 50 67.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37378633 + NM_001172713 GOLGA4 1 1010.02 104.28 72 13.19 94.65 26 7.2 Yes 13 1.78 Yes 25 0.9 Yes -25 0.9 Yes 45 94.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 37379162 + NM_001172713 GOLGA4 1 2.51 0.25 17 1.12 0 9 3.87 No 11 1.71 Yes 0 0 No -23 0.71 Yes 47 66.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37385095 + NM_001172713 GOLGA4 1 0.22 0.25 15 6.02 91.18 25 4.16 No 7 0.08 No 0 0 No -20 0.72 Yes 50 71.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37402733 + NM_001172713 GOLGA4 1 62.01 41.25 72 8.23 77.79 27 5.64 Yes 22 1.73 Yes 26 0.42 Yes -34 0.64 No 36 72.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 93269405 + NM_005113 GOLGA5 1 0.39 0.31 20 3.11 0 43 6.34 Yes 65 1.45 Yes 0 0 No -27 0.4 No 43 35.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 93273083 + NM_005113 GOLGA5 1 0.1 0.1 7 0.69 80.71 30 8.47 Yes 17 0.44 No 0 0 No -29 0.84 Yes 41 87.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 93275622 + NM_005113 GOLGA5 1 0.23 0.26 16 5.11 84.79 31 6.08 Yes 18 0.13 No 26 0.47 Yes -30 0.84 Yes 40 89.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 93278602 + NM_005113 GOLGA5 1 0.11 0.1 7 11.06 90.79 13 5.54 No 55 1.36 Yes 0 0 No -22 0.58 No 48 77.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 93286038 + NM_005113 GOLGA5 1 0.08 0.13 8 1.97 72.81 29 6.09 Yes 69 0.97 Yes 23 0.68 Yes -28 0.47 No 42 48.94 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 93287353 + NM_005113 GOLGA5 1 0.12 0.13 8 10.79 93.17 61 6.94 Yes 40 1.72 Yes 0 0 No -31 0.65 No 39 58.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 93299547 + NM_005113 GOLGA5 1 0.5 0.5 26 -1.17 0 19 4.58 No 6 1.08 Yes 0 0 No -18 0.9 Yes 52 96.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 41364569 + NM_001002296 GOLGA7 1 0.11 0.25 14 -11.12 0 10 5.47 No 56 0.15 No 26 0.28 Yes -10 0.61 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 41364572 + NM_001002296 GOLGA7 1 13.35 28.72 72 -9.77 0 13 4.12 No 59 0.15 No 26 0.28 Yes -12 0.62 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 41366788 + NM_001002296 GOLGA7 1 0.04 0.11 7 10.16 88.08 30 4.34 No 38 -2.66 No 0 0 No -29 0.58 No 49 47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 34673839 - NR_027409 GOLGA8A 1 3.89 0.15 8 0.26 0 15 4.58 No 48 -2.69 No 26 0.87 Yes -14 0.24 No 57 16.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 121387356 - NM_001256487 GOLGB1 1 5.2 2.68 59 6.52 85.02 18 7 Yes 5 1.23 Yes 26 0.55 Yes -17 0.49 No 53 75.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 121399082 - NM_001256487 GOLGB1 1 0.18 0.13 9 4.74 90.03 24 4.5 No 61 0.47 No 0 0 No -23 0.89 Yes 47 90.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121399483 - NM_001256487 GOLGB1 1 0.37 0.25 14 10.17 91.24 38 6.41 Yes 46 0.74 No 0 0 No -23 0.5 No 47 61.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121401809 - NM_001256487 GOLGB1 1 0.43 0.38 21 -0.64 80.57 17 4.73 No 31 1.2 Yes 0 0 No -43 0.48 No 27 80.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 121401811 - NM_001256487 GOLGB1 1 5.63 4.56 69 6.74 86.09 15 4.63 No 29 1.2 Yes 0 0 No -41 0.59 No 29 77.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 121433819 - NM_001256487 GOLGB1 1 0.55 0.58 32 2.57 0 43 4.3 No 19 0.34 No 0 0 No -29 0.87 Yes 41 92.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121437762 - NM_001256487 GOLGB1 1 2.13 0.85 36 4.96 81.46 50 5.02 No 37 0.64 No 0 0 No -25 0.56 No 49 56.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121438598 - NM_001256487 GOLGB1 1 22.97 8.32 72 -0.88 80.47 16 4.54 No 38 0.66 No 0 0 No -20 0.83 Yes 50 62.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 121438601 - NM_001256487 GOLGB1 1 23.53 8.36 72 -1.52 0 13 4.22 No 35 0.67 No 26 0.55 Yes -17 0.75 Yes 53 55.88 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 121448184 - NM_001256487 GOLGB1 1 0.4 0.31 13 -7.38 0 26 6.29 Yes 13 0.27 No 0 0 No -25 0.5 No 37 74.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 167761333 - NM_014498 GOLIM4 1 0.16 0.21 11 2.58 78.69 29 5.35 No 61 0.17 No 18 0.78 Yes -28 0.53 No 42 72.38 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 167762196 - NM_014498 GOLIM4 1 0.21 0.33 19 8.86 92.21 33 7.78 Yes 20 0.64 No 0 0 No -32 0.57 No 38 74.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 167791098 - NM_014498 GOLIM4 1 0.21 0.19 12 4.63 84.22 30 6.16 Yes 17 1.21 Yes 0 0 No -25 0.6 No 45 83.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 88642502 - NM_016548 GOLM1 1 0.71 0.14 7 -0.96 68.48 25 5.23 No 12 0.15 No 0 0 No -24 0.93 Yes 46 93.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 32170875 - NM_022130 GOLPH3 1 0.26 0.31 18 6.58 85.05 27 5.37 No 5 0.19 No 0 0 No -26 0.58 No 44 77.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 32172052 - NM_022130 GOLPH3 1 0.89 1.15 48 10.67 87.44 38 7.28 Yes 76 0.82 Yes 0 0 No -32 0.48 No 38 43.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150621704 - NM_018178 GOLPH3L 1 1.08 1.65 60 12.4 93.03 21 6.63 Yes 8 1.12 Yes 0 0 No -20 0.67 Yes 50 83.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150634432 - NM_018178 GOLPH3L 1 0.2 0.22 8 -11.23 0 16 3.5 No 66 0.59 No 29 0.58 Yes -34 0.29 No 32 16.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 150643715 - NM_018178 GOLPH3L 1 0.23 0.29 17 2.76 83.92 34 7.05 Yes 68 0.83 Yes 0 0 No -22 0.56 No 40 53.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150665988 - NM_018178 GOLPH3L 1 0.43 0.53 31 11.16 97.1 30 6.37 Yes 73 1.46 Yes 0 0 No -27 0.52 No 41 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 150666650 - NM_018178 GOLPH3L 1 1.89 2.38 60 5.25 76.12 33 6.71 Yes 20 0.6 No 25 0.76 Yes -32 0.65 No 38 70.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 150667321 - NM_018178 GOLPH3L 1 0.7 0.78 34 2.71 0 9 3.87 No 8 0.79 Yes 0 0 No -38 0.66 No 32 56.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150668338 - NM_018178 GOLPH3L 1 0.19 0.19 12 6.22 82.41 24 6.49 Yes 42 1.15 Yes 0 0 No -23 0.88 Yes 47 91.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 21660050 + NM_016072 GOLT1B 1 4.76 2.19 61 8.88 92.81 30 5.48 No 17 0.72 No 29 0.79 Yes -29 0.65 No 41 69.69 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 21660877 + NM_016072 GOLT1B 1 7.7 3.26 67 8.73 75.98 30 4.21 No 42 0.89 Yes 29 0.87 Yes -29 0.8 Yes 41 91.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 21661090 + NM_016072 GOLT1B 1 1.76 0.81 32 3.93 72.37 38 6.04 Yes 32 2.3 Yes 0 0 No -37 0.74 Yes 33 77.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 21661094 + NM_016072 GOLT1B 1 1.44 0.65 32 -0.85 0 42 6.23 Yes 36 2.28 Yes 0 0 No -41 0.71 Yes 29 79.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 21668753 + NM_016072 GOLT1B 1 0.08 0.14 9 7.83 91.42 26 4.55 No 1 1.15 Yes 0 0 No -28 0.52 No 42 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 155740949 - NM_032292 GON4L 1 0.59 0.28 17 5.66 73.41 23 4.59 No 1 1.43 Yes 0 0 No -22 0.82 Yes 48 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155770633 - NM_032292 GON4L 1 0.53 0.28 14 3.24 0 35 5.98 Yes 22 1.01 Yes 0 0 No -34 0.64 No 36 74.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 155774408 - NM_032292 GON4L 1 0.31 0.18 13 7.27 86.87 19 7.07 Yes 6 1.29 Yes 0 0 No -18 0.65 No 52 79.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 155783613 - NM_032292 GON4L 1 0.65 0.39 18 7.61 90.41 24 9.27 Yes 11 1.4 Yes 23 0.94 Yes -23 0.9 Yes 47 76.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155791336 - NM_032292 GON4L 1 1.67 0.97 37 -1.3 0 24 5 No 11 0.17 No 22 0.76 Yes -31 0.61 No 39 85.91 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 155792265 - NM_032292 GON4L 1 1.66 0.89 32 -2.77 75.9 28 6.56 Yes 15 1.25 Yes 0 0 No -27 0.9 Yes 43 86.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155798111 - NM_032292 GON4L 1 0.69 0.29 17 9.31 92.69 24 7.42 Yes 47 0.42 No 0 0 No -23 0.96 Yes 47 95.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155801412 - NM_032292 GON4L 1 3.53 1.56 58 10.88 92.69 40 6.4 Yes 62 0.93 Yes 32 0.21 Yes -32 0.42 No 34 66.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 155802742 - NM_032292 GON4L 1 4.68 2.14 58 8.1 86.54 31 6.4 Yes 18 1.53 Yes 30 0.78 Yes -35 0.56 No 40 64.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 155804196 - NM_032292 GON4L 1 2.39 1.04 44 3.83 68.66 24 5.77 Yes 11 0.23 No 0 0 No -23 0.71 Yes 47 77.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155820676 - NM_032292 GON4L 1 4.01 1.72 58 10.4 85.22 25 5.99 Yes 17 1.69 Yes 0 0 No -24 0.67 Yes 46 88.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 117882088 - NM_001017408 GOPC 1 0.11 0.13 7 8.21 86.11 32 6.03 Yes 6 0.48 No 0 0 No -31 0.51 No 46 58.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 117898635 - NM_001017408 GOPC 1 9.88 7.92 72 5.19 78.15 30 10.62 Yes 46 0.81 Yes 29 0.88 Yes -29 0.92 Yes 41 91.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 117900222 - NM_001017408 GOPC 1 0.52 0.49 25 -2.69 0 12 3.81 No 20 0.86 Yes 0 0 No -32 0.51 No 37 61.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 117911728 - NM_001017408 GOPC 1 0.12 0.11 8 4.19 0 41 9.05 Yes 28 1.5 Yes 0 0 No -40 0.6 No 30 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 117921335 - NM_001017408 GOPC 1 1.1 0.99 41 7.36 79.38 32 7.31 Yes 36 1.17 Yes 0 0 No -31 0.69 Yes 39 87.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 170515836 + NM_001320252 GORAB 1 0.88 0.36 20 11.95 92.17 41 5.75 Yes 68 0.4 No 0 0 No -23 0.5 No 47 74.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 170521264 + NM_001320252 GORAB 1 0.37 0.15 8 6.41 70.92 28 5.4 No 11 1.17 Yes 0 0 No -27 0.71 Yes 43 79.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 39140307 - NM_031899 GORASP1 1 1.35 0.38 23 9.39 82.27 20 5.1 No NA NA NA 0 0 No -19 0.41 No 51 76.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 39140345 - NM_031899 GORASP1 1 0.4 0.13 8 3.74 75.86 43 7 Yes 69 -0.33 No 31 0.32 Yes -31 0.62 No 39 78.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 39141946 - NM_031899 GORASP1 1 19.5 2.93 64 1.6 68.09 20 6.86 Yes 58 0.6 No 29 0.53 Yes -29 0.52 No 34 73.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 39141946 - NM_031899 GORASP1 1 5.4 0.79 38 1.6 68.09 20 6.86 Yes 58 0.6 No 29 0.53 Yes -29 0.52 No 34 73.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 39143062 - NM_031899 GORASP1 1 2.69 0.58 31 8.81 76.63 25 5.39 No 3 1.86 Yes 24 0.96 Yes -24 0.94 Yes 46 96.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 171786326 + NM_015530 GORASP2 1 0.08 0.14 10 7.17 82.23 25 5.1 No 72 0.91 Yes 24 0.8 Yes -24 0.56 No 46 60.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 171793133 + NM_015530 GORASP2 1 0.51 1.03 40 9.57 80.11 32 6.47 Yes 41 -1.27 No 28 0.39 Yes -31 0.68 Yes 39 66.34 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 171799682 + NM_015530 GORASP2 1 0.52 0.92 42 11.52 92.22 17 4.17 No 4 0.72 No 0 0 No -30 0.91 Yes 40 93.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 171806023 + NM_015530 GORASP2 1 0.15 0.42 21 4.42 85.33 24 5.89 Yes 11 1.08 Yes 27 0.87 Yes -23 0.76 Yes 47 93.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 171806038 + NM_015530 GORASP2 1 0.04 0.1 7 -4.45 0 18 4.41 No 26 1.09 Yes 27 0.87 Yes -21 0.53 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 171812951 + NM_015530 GORASP2 1 0.48 1.97 60 -2.89 0 10 2.62 No 25 1.25 Yes 0 0 No -42 0.69 Yes 28 66.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 171812988 + NM_015530 GORASP2 1 0.12 0.49 23 9.92 88.36 25 5.97 Yes 62 1.24 Yes 0 0 No -24 0.61 No 41 67.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 171814355 + NM_015530 GORASP2 1 0.06 0.24 17 7 90.59 27 5.1 No 14 1.02 Yes 0 0 No -26 0.78 Yes 44 70.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 171818154 + NM_015530 GORASP2 1 0.07 0.28 15 -7.77 0 13 4.36 No 36 1.77 Yes 23 0.44 Yes -48 0.8 Yes 22 90.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 171818174 + NM_015530 GORASP2 1 0.05 0.17 9 -15.46 0 26 5.39 No 56 1.78 Yes 0 0 No -25 0.46 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 171818184 + NM_015530 GORASP2 1 0.03 0.14 8 2.76 0 15 4.58 No 66 1.78 Yes 0 0 No -30 0.45 No 40 40.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 171819606 + NM_015530 GORASP2 1 0.04 0.15 10 5.72 75.6 27 6.27 Yes 7 0.69 No 0 0 No -31 0.76 Yes 39 76.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 28807775 + NM_001007025 GOSR1 1 0.29 0.35 20 6.52 93.18 28 5.29 No 38 0.35 No 0 0 No -27 0.8 Yes 43 66.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 28811687 + NM_001007025 GOSR1 1 0.07 0.13 9 2.84 0 16 4 No 21 0.96 Yes 0 0 No -33 0.83 Yes 37 78.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 28814806 + NM_001007025 GOSR1 1 0.06 0.11 7 1.8 83.92 31 5.45 No 75 0.91 Yes 0 0 No -30 0.61 No 44 83.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 28819325 + NM_001007025 GOSR1 1 0.14 0.33 19 6.88 86.89 25 5.39 No 46 -2.65 No 0 0 No -30 0.49 No 46 56.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 28822443 + NM_001007025 GOSR1 1 0.13 0.29 17 0.8 79.13 21 4.25 No 70 0.75 No 21 0.82 Yes -21 0.58 No 50 65.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 28825186 + NM_001007025 GOSR1 1 0.18 0.36 23 9.12 87.82 24 5.36 No 23 0.54 No 0 0 No -23 0.93 Yes 47 95.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 28831065 + NM_001007025 GOSR1 1 0.07 0.15 9 -2.02 81.99 24 6.72 Yes 11 1.17 Yes 0 0 No -28 0.64 No 42 81.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 28831069 + NM_001007025 GOSR1 1 0.27 0.57 27 3.79 0 28 7.01 Yes 15 1.14 Yes 0 0 No -32 0.59 No 38 74.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 28832113 + NM_001007025 GOSR1 1 0.06 0.13 9 7.44 84.24 32 6.63 Yes 19 1.13 Yes 0 0 No -31 0.91 Yes 39 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 28832498 + NM_001007025 GOSR1 1 0.09 0.19 11 7.91 84.66 49 6.92 Yes 36 0.16 No 0 0 No -33 0.46 No 37 56.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 28833874 + NM_001007025 GOSR1 1 0.05 0.1 7 7.98 85.98 27 5.02 No 56 1.77 Yes 0 0 No -26 0.6 No 44 58.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 28837902 + NM_001007025 GOSR1 1 0.82 1.68 53 1.52 0 40 5.92 Yes 14 0.14 No 0 0 No -26 0.33 No 36 39.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 28838567 + NM_001007025 GOSR1 1 0.16 0.32 19 10.93 88.27 31 7.06 Yes 18 1.14 Yes 0 0 No -30 0.62 No 40 56.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 28839355 + NM_001007025 GOSR1 1 0.09 0.17 10 10.38 83.19 23 6.46 Yes 10 1.06 Yes 0 0 No -22 0.82 Yes 48 80.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 28849228 + NM_001007025 GOSR1 1 0.13 0.24 13 4.3 80.77 37 7.35 Yes 24 1.67 Yes 18 0.75 Yes -36 0.8 Yes 34 92.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 28849260 + NM_001007025 GOSR1 1 1.06 1.85 57 -0.31 66.7 13 5.99 Yes 56 1.65 Yes 18 0.75 Yes -24 0.22 No 17 23.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 45008436 + NM_001321134 GOSR2 1 0.09 0.15 9 7.96 89.61 27 3.89 No 4 0.57 No 30 0.63 Yes -26 0.5 No 48 61.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 45008467 + NM_001321134 GOSR2 1 3.63 5.64 70 1.91 77.94 27 6.18 Yes 58 0.57 No 30 0.63 Yes -33 0.63 No 37 75.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 45008470 + NM_001321134 GOSR2 1 0.22 0.35 18 -4.02 0 10 3.87 No 61 0.57 No 0 0 No -36 0.68 Yes 34 75.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 101157436 - NM_002079 GOT1 1 0.11 0.17 10 -4.97 0 14 3.87 No 57 1.39 Yes 0 0 No -35 0.79 Yes 35 85.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101159503 - NM_002079 GOT1 1 0.11 0.14 8 2.71 84.79 15 4.58 No 2 1.51 Yes 0 0 No -26 0.5 No 44 64.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 101163601 - NM_002079 GOT1 1 0.08 0.14 9 4.99 84.72 40 5.47 No 40 2.3 Yes 0 0 No -30 0.66 No 40 60.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 58743485 - NM_001286220 GOT2 1 0.07 0.36 20 -1.43 0 14 4.47 No 57 -3.91 No 20 0.73 Yes -23 0.81 Yes 54 30.62 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 58750717 - NM_001286220 GOT2 1 0.04 0.1 7 -10.55 0 29 5.83 Yes 16 1.34 Yes 0 0 No -28 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 58751565 - NM_001286220 GOT2 1 0.1 0.22 13 7.51 73.15 26 6.32 Yes 13 0.55 No 0 0 No -25 0.47 No 44 49.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 58752204 - NM_001286220 GOT2 1 0.03 0.14 8 -8.38 0 32 6.08 Yes 41 0.24 No 0 0 No -32 0.92 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 145138846 + NM_003801 GPAA1 1 0.61 1.01 39 2.61 0 26 6.56 Yes 13 1.7 Yes 25 0.7 Yes -25 0.78 Yes 45 91.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145138883 + NM_003801 GPAA1 1 0.13 0.19 11 6.81 81.2 25 5.46 No 50 1.68 Yes 25 0.7 Yes -19 0.31 No 42 40.45 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 145139013 + NM_003801 GPAA1 1 0.64 1.39 50 2.73 69.48 18 4.91 No 5 1.34 Yes 26 0.92 Yes -32 0.65 No 38 60.53 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 145139188 + NM_003801 GPAA1 1 0.54 1.07 47 9.72 87.67 21 6.36 Yes 8 1.73 Yes 20 0.85 Yes -20 0.67 Yes 50 60.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 145139321 + NM_003801 GPAA1 1 0.32 0.36 21 -1.43 0 10 3.87 No 16 1.18 Yes 0 0 No -28 0.95 Yes 42 94.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145139357 + NM_003801 GPAA1 1 0.72 0.92 43 1.65 76.69 20 6.11 Yes 52 1.13 Yes 0 0 No -19 0.61 No 51 42.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145140236 + NM_003801 GPAA1 1 0.52 0.67 39 7.83 86.65 10 7.35 Yes -3 0.77 Yes 0 0 No -25 0.32 No 51 55.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145140460 + NM_003801 GPAA1 1 1.17 1.79 56 -8.88 65.16 27 5.29 No 63 -4.32 No 19 0.28 Yes -21 0.77 Yes 49 72.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 45575837 + NM_001316952 GPALPP1 1 1.06 1.03 39 12.41 86.87 31 7.17 Yes 73 0.74 No 30 0.28 Yes -28 0.34 No 35 38.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 45578445 + NM_001316952 GPALPP1 1 0.32 0.32 19 2.76 0 9 3.87 No 64 -3.8 No 0 0 No -26 0.49 No 48 51.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 45578807 + NM_001316952 GPALPP1 1 0.33 0.33 19 1.52 0 31 6.54 Yes 57 -3.8 No 0 0 No -30 0.79 Yes 40 68.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 45579254 + NM_001316952 GPALPP1 1 0.09 0.1 7 4.74 84.41 43 8.63 Yes 30 2.13 Yes 0 0 No -42 0.85 Yes 28 96.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 45582940 + NM_001316952 GPALPP1 1 0.13 0.15 9 1.44 0 21 4.28 No 49 1.05 Yes 0 0 No -35 0.64 No 35 68.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 113913256 - NM_001244949 GPAM 1 1.36 0.32 20 0.1 0 13 3.57 No 58 0.74 No 0 0 No -20 0.83 Yes 50 63.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 113920143 - NM_001244949 GPAM 1 1.13 0.38 20 8.9 93.48 16 5.29 No 24 0.85 Yes 0 0 No -21 0.74 Yes 49 74.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 113928945 - NM_001244949 GPAM 1 0.33 0.15 10 5.8 73.57 35 8.91 Yes 22 0 No 0 0 No -27 0.83 Yes 43 79.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 113930440 - NM_001244949 GPAM 1 1.45 0.61 31 10.29 96.53 25 5.57 Yes 60 -1.1 No 0 0 No -22 0.71 Yes 48 59.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 113931986 - NM_001244949 GPAM 1 0.47 0.13 7 1.37 61.61 46 6.32 Yes 19 1.61 Yes 0 0 No -31 0.83 Yes 39 75.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 113942646 - NM_001244949 GPAM 1 2.67 0.47 25 0.63 0 31 7.28 Yes 18 1.39 Yes 26 0.94 Yes -30 0.97 Yes 40 97.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 41442291 + NM_178819 GPAT4 1 0.9 0.74 37 7.3 91.63 50 6.92 Yes 67 -1.15 No 43 0.04 Yes -44 0.51 No 26 73.68 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 41454266 + NM_178819 GPAT4 1 1.08 0.9 42 5.53 83.72 17 6.5 Yes 4 1.46 Yes 0 0 No -16 0.56 No 54 69.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 41456918 + NM_178819 GPAT4 1 0.11 0.18 11 7.29 80.6 25 5.37 No 12 0.62 No 0 0 No -24 0.96 Yes 46 97.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 41467302 + NM_178819 GPAT4 1 0.51 0.47 24 4.09 78.04 25 6.32 Yes 12 1.84 Yes 0 0 No -24 0.87 Yes 46 94.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 41468117 + NM_178819 GPAT4 1 0.99 0.88 43 8.13 82.04 23 5.2 No 10 1.07 Yes 22 0.97 Yes -22 0.93 Yes 48 95.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 41469707 + NM_178819 GPAT4 1 0.48 0.65 32 -8.77 0 17 4.21 No 30 0.84 Yes 0 0 No -42 0.73 Yes 28 86.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 41470304 + NM_178819 GPAT4 1 0.25 0.29 15 5.73 76.77 19 5 No 14 0.1 No 26 0.77 Yes -26 0.79 Yes 44 93.3 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 41476420 + NM_178819 GPAT4 1 0.32 0.32 16 4.77 0 32 4.79 No 19 1.02 Yes 0 0 No -31 0.75 Yes 48 75.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 41476739 + NM_178819 GPAT4 1 0.98 1.13 47 4.35 63.09 41 4.69 No 19 0.68 No 0 0 No -31 0.59 No 39 57.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 33605729 + NM_018025 GPATCH1 1 1.06 0.14 7 4.74 84.41 45 7.09 Yes 71 0.39 No 0 0 No -35 0.58 No 35 79.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 33608452 + NM_018025 GPATCH1 1 2.27 0.5 24 6.05 72.39 23 7 Yes 10 1.6 Yes 0 0 No -22 0.81 Yes 48 84.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 37321794 + NM_174931 GPATCH11 1 0.51 0.44 25 -4.46 53.24 52 8.07 Yes 39 1.82 Yes 0 0 No -51 0.72 Yes 19 84.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 217620519 - NM_018040 GPATCH2 1 2.9 0.49 25 8.03 92.68 19 7.1 Yes 6 1.13 Yes 0 0 No -32 0.92 Yes 38 94.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 217666036 - NM_018040 GPATCH2 1 1.67 0.19 12 10.95 95.48 35 5.54 No 66 0.84 Yes 26 0.48 Yes -21 0.48 No 49 69.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 217668418 - NM_018040 GPATCH2 1 23.34 2.83 65 9.72 84.07 32 5.34 No 25 0.67 No 31 0.8 Yes -31 0.91 Yes 39 93.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 217693002 - NM_018040 GPATCH2 1 1.28 0.28 17 7.91 89.56 20 6.58 Yes 7 0.93 Yes 0 0 No -23 0.94 Yes 47 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 217719088 - NM_018040 GPATCH2 1 0.55 0.15 10 4.47 88.18 23 4.9 No 10 0.51 No 0 0 No -22 0.86 Yes 48 90.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 217757868 - NM_018040 GPATCH2 1 0.7 0.14 8 4.11 83.2 25 6.32 Yes 12 1 Yes 0 0 No -25 0.48 No 45 54.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 217783535 - NM_018040 GPATCH2 1 97.51 22.82 72 7.34 88.53 17 7.72 Yes 41 1.19 Yes 23 0.84 Yes -23 0.59 No 47 72.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 76618878 + NM_001322028 GPATCH2L 1 1.14 0.65 31 6.25 80.39 46 9.52 Yes 33 2.02 Yes 39 0.28 Yes -41 0.65 No 25 84.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 76642968 + NM_001322028 GPATCH2L 1 0.1 0.11 8 -7.23 81.65 31 8.67 Yes 18 0.83 Yes 0 0 No -28 0.65 No 42 65.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 76644234 + NM_001322028 GPATCH2L 1 6.73 6.82 72 10.34 76.3 133 11.27 Yes 45 1.76 Yes 37 0.68 Yes -37 0.62 No 33 70.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 76644334 + NM_001322028 GPATCH2L 1 0.32 0.31 20 -1.04 0 58 5.09 No 45 0.76 No 0 0 No -28 0.7 Yes 42 64.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 76644550 + NM_001322028 GPATCH2L 1 0.75 1.04 45 7.58 85.14 25 5.39 No 65 1.24 Yes 24 0.94 Yes -24 0.95 Yes 46 97.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 76644565 + NM_001322028 GPATCH2L 1 0.07 0.1 7 4.27 84.35 23 4.85 No 55 0.8 Yes 0 0 No -22 0.77 Yes 48 73.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156566041 - NM_015590 GPATCH4 1 0.13 0.25 13 6.61 78.95 17 8.82 Yes 4 1.55 Yes 20 0.42 Yes -31 0.44 No 50 52.08 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 156567715 - NM_015590 GPATCH4 1 0.23 0.64 29 1.83 75.79 19 3.8 No 37 0.85 Yes 18 0.59 Yes -24 0.31 No 46 51.06 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 156567731 - NM_015590 GPATCH4 1 0.26 0.53 27 7.22 83.67 34 6.08 Yes 65 1.36 Yes 18 0.59 Yes -33 0.64 No 37 62.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 156568136 - NM_015590 GPATCH4 1 0.05 0.1 7 -10.42 0 15 4.12 No 62 -4.52 No 26 0.92 Yes -14 0.42 No 15 38.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 42483418 - NM_001304939 GPATCH8 1 0.1 0.1 7 -1.34 77 38 7.27 Yes 29 1.13 Yes 0 0 No -37 0.63 No 33 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 42496680 - NM_001304939 GPATCH8 1 2.29 2.24 56 12.77 95.1 28 4.34 No 20 0.39 No 0 0 No -27 0.7 Yes 43 80.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42507229 - NM_001304939 GPATCH8 1 0.19 0.19 11 9.33 88.27 21 5.66 Yes 8 1.25 Yes 0 0 No -20 0.75 Yes 50 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42516084 - NM_001304939 GPATCH8 1 5.21 3.86 66 8.14 92.41 25 8 Yes 26 1.62 Yes 24 0.9 Yes -24 0.85 Yes 46 92.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42541085 - NM_001304939 GPATCH8 1 0.72 0.51 22 11.67 94.25 26 5.38 No 70 0.88 Yes 0 0 No -25 0.83 Yes 45 74.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 56526879 + NM_001127236 GPBP1 1 0.1 0.15 9 5.23 71.77 32 5.31 No 38 1.13 Yes 0 0 No -31 0.51 No 39 61.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 56527050 + NM_001127236 GPBP1 1 0.13 0.19 11 5.17 96.96 23 4.8 No 49 -1.69 No 0 0 No -19 0.44 No 51 75.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 56529412 + NM_001127236 GPBP1 1 0.05 0.14 8 9.52 94.92 42 7.25 Yes 29 0.81 Yes 0 0 No -41 0.68 Yes 29 70.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 56532939 + NM_001127236 GPBP1 1 77.63 90.57 72 9.1 85.16 24 5.39 No 41 0.1 No 28 0.67 Yes -28 0.72 Yes 42 58.7 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 56545280 + NM_001127236 GPBP1 1 7.71 15.69 72 0.01 62.15 42 6.71 Yes 22 1.04 Yes 34 0.67 Yes -34 0.71 Yes 29 79.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 56545283 + NM_001127236 GPBP1 1 1.05 2.18 60 1.45 71.25 45 6.89 Yes 25 1.05 Yes 0 0 No -37 0.73 Yes 26 78.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 56546394 + NM_001127236 GPBP1 1 0.07 0.17 10 11.04 88.27 31 6.37 Yes 59 0.47 No 0 0 No -30 0.79 Yes 40 73.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 56546809 + NM_001127236 GPBP1 1 0.06 0.15 11 4.2 74.25 26 5.64 Yes 52 1.19 Yes 0 0 No -25 0.44 No 52 65.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 46095286 - NM_021639 GPBP1L1 1 0.09 0.15 9 8.27 85.39 25 5.25 No 12 0.27 No 0 0 No -24 0.86 Yes 46 72.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 46099266 - NM_021639 GPBP1L1 1 0.08 0.25 16 3 65.66 27 5.21 No 14 0.02 No 0 0 No -26 0.79 Yes 49 52.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 46099348 - NM_021639 GPBP1L1 1 0.38 1.14 44 6.8 92.65 23 5.39 No 72 -4.53 No 24 0.82 Yes -22 0.56 No 48 68.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 46106075 - NM_021639 GPBP1L1 1 0.05 0.13 8 -15 0 37 7.06 Yes 24 1.2 Yes 0 0 No -36 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 46107484 - NM_021639 GPBP1L1 1 0.3 0.72 32 4.74 84.41 26 6.05 Yes 30 1.49 Yes 25 0.94 Yes -25 0.68 Yes 45 88.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46121073 - NM_021639 GPBP1L1 1 0.15 0.38 20 7.01 87.46 25 5.59 Yes 12 0.61 No 0 0 No -27 0.51 No 43 64.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46123514 - NM_021639 GPBP1L1 1 0.08 0.21 12 1.36 0 49 7.67 Yes 36 1.79 Yes 0 0 No -32 0.5 No 38 63.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 46124435 - NM_021639 GPBP1L1 1 0.23 0.57 32 8.31 86.52 31 7.94 Yes 72 1.88 Yes 0 0 No -30 0.89 Yes 40 94.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46126050 - NM_021639 GPBP1L1 1 0.12 0.14 9 1.81 67.21 69 10.3 Yes 56 1.49 Yes 0 0 No -55 0.68 Yes 15 63.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 46146486 - NM_021639 GPBP1L1 1 0.52 0.63 32 10.83 99.17 21 5.54 No 25 0.86 Yes 0 0 No -20 0.36 No 50 62.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 5535650 - NM_019593 GPCPD1 1 0.1 0.11 8 8.83 87.18 22 5.1 No 49 0.34 No 0 0 No -29 0.65 No 49 59.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5548489 - NM_019593 GPCPD1 1 0.25 0.43 23 8.54 81.73 21 5.75 Yes 8 1.88 Yes 0 0 No -20 0.67 Yes 50 86.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 5556127 - NM_019593 GPCPD1 1 0.96 1.49 52 1.92 75.38 24 5.92 Yes 11 0.73 No 0 0 No -23 0.86 Yes 47 88.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5556621 - NM_019593 GPCPD1 1 0.39 0.75 31 -2.16 0 32 4.76 No 2 0.54 No 0 0 No -31 0.59 No 39 72.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 5560782 - NM_019593 GPCPD1 1 0.22 0.24 17 -2.9 0 26 7.45 Yes 10 0.89 Yes 26 0.64 Yes -25 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 5563532 - NM_019593 GPCPD1 1 0.72 0.79 36 5.12 84.41 34 7.41 Yes 21 1.53 Yes 0 0 No -33 0.51 No 37 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 5572533 - NM_019593 GPCPD1 1 0.53 0.72 37 5.24 83.14 20 5.1 No 7 0.67 No 0 0 No -19 0.51 No 51 71.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 5579465 - NM_019593 GPCPD1 1 0.19 0.18 12 -5.71 80.33 22 7.58 Yes 32 1.45 Yes 0 0 No -21 0.78 Yes 49 62.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 5580110 - NM_019593 GPCPD1 1 4.11 4.06 69 4.32 80.39 27 5.49 No 14 1.38 Yes 0 0 No -26 0.67 Yes 44 84.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 5580132 - NM_019593 GPCPD1 1 0.22 0.22 12 9.17 83.77 28 4.86 No 12 0.57 No 0 0 No -27 0.69 Yes 43 60.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 5585955 - NM_019593 GPCPD1 1 0.41 0.19 11 7.58 83.58 27 5.57 Yes 34 0.53 No 0 0 No -24 0.6 No 46 81.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 5590450 - NM_019593 GPCPD1 1 0.48 0.33 8 -11.88 0 17 4.12 No 52 0.01 No 0 0 No -34 0.41 No 60 10.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5590458 - NM_019593 GPCPD1 1 5.17 2.51 64 -4.72 52.24 57 7.9 Yes -4 0.32 No 0 0 No -26 0.67 Yes 14 74.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5590894 - NM_019593 GPCPD1 1 0.41 0.25 14 7.46 75.49 28 5.37 No 51 0.65 No 0 0 No -27 0.89 Yes 43 92.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 157358296 + NM_001083112 GPD2 1 1.63 2.38 61 3.79 92.08 24 5.1 No 11 0.68 No 23 0.86 Yes -23 0.52 No 47 69.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 157368736 + NM_001083112 GPD2 1 0.44 0.53 27 5.01 0 29 9.21 Yes 16 1.23 Yes 0 0 No -28 0.8 Yes 42 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 157369900 + NM_001083112 GPD2 1 0.37 0.35 20 6.37 88.65 23 4.81 No 32 0.61 No 0 0 No -22 0.59 No 48 49.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 67017758 + NM_001024218 GPHN 1 0.14 0.14 8 6.67 83.82 19 7.07 Yes 6 1.26 Yes 18 0.56 Yes -18 0.67 Yes 52 87.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 67017761 + NM_001024218 GPHN 1 0.19 0.18 10 6.29 84.99 22 7.28 Yes 9 1.23 Yes 0 0 No -21 0.89 Yes 49 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67033118 + NM_001024218 GPHN 1 0.19 0.19 10 10.63 92.35 29 5.92 Yes 16 1.01 Yes 0 0 No -28 0.89 Yes 42 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67150419 + NM_001024218 GPHN 1 0.31 0.46 24 3.72 86.26 42 6.91 Yes 59 -2.44 No 0 0 No -44 0.75 Yes 26 71.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 67154964 + NM_001024218 GPHN 1 1.06 1.47 56 5.33 72.53 34 5.52 No 21 0.24 No 0 0 No -34 0.59 No 37 52.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 67157924 + NM_001024218 GPHN 1 0.69 0.99 42 11.42 88.27 22 6.53 Yes 31 0.15 No 0 0 No -28 0.83 Yes 42 82.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 67176074 + NM_001024218 GPHN 1 0.8 1.14 45 7.71 93.29 9 5.1 No 46 0.53 No 24 0.49 Yes -19 0.65 No 51 70.32 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 67195782 + NM_001024218 GPHN 1 0.1 0.15 7 5.41 77.37 22 5.3 No 4 0.06 No 0 0 No -26 0.58 No 44 71.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 67195798 + NM_001024218 GPHN 1 0.28 0.38 21 4.18 90.67 11 4.12 No 20 0.22 No 0 0 No -23 0.62 No 47 54.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 67199915 + NM_001024218 GPHN 1 0.21 0.31 16 9.12 77.67 26 4.81 No 21 0.66 No 0 0 No -26 0.68 Yes 44 71.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 67210085 + NM_001024218 GPHN 1 0.06 0.1 7 10.27 85.79 32 6.54 Yes 19 0.84 Yes 0 0 No -23 0.45 No 39 47.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 67260047 + NM_001024218 GPHN 1 0.49 0.61 29 4.36 79.92 14 4.98 No 51 -5.41 No 0 0 No -26 0.47 No 44 45.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 67279936 + NM_001024218 GPHN 1 0.13 0.15 10 6.89 78.28 22 5.93 Yes 9 1.11 Yes 0 0 No -24 0.52 No 40 52.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 67280069 + NM_001024218 GPHN 1 0.2 0.29 16 5.35 82.57 25 4.89 No 12 0.21 No 0 0 No -24 0.8 Yes 50 51.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 67295622 + NM_001024218 GPHN 1 4.42 4.92 70 7.42 86.64 27 5.17 No 14 0.5 No 0 0 No -26 0.55 No 44 66.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 67309395 + NM_001024218 GPHN 1 4.46 5.03 69 10.91 93.87 36 6.48 Yes 48 1.25 Yes 35 0.47 Yes -35 0.59 No 35 73.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 67319035 + NM_001024218 GPHN 1 0.22 0.26 14 12.38 99.09 30 5.87 Yes 56 0.38 No 0 0 No -29 0.56 No 41 60.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 67443519 + NM_001024218 GPHN 1 0.28 0.36 15 2.29 85.89 23 5.1 No 60 1.34 Yes 0 0 No -22 0.96 Yes 48 93.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67452097 + NM_001024218 GPHN 1 0.09 0.11 8 2.04 80.73 20 6.24 Yes 7 1.06 Yes 0 0 No -26 0.75 Yes 44 80.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67452398 + NM_001024218 GPHN 1 0.41 0.6 19 8.39 78.38 47 7.44 Yes 9 1.34 Yes 21 0.85 Yes -46 0.42 No 24 69.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 67454652 + NM_001024218 GPHN 1 0.22 0.32 16 6.62 73.43 28 4.74 No 69 0.6 No 0 0 No -27 0.61 No 48 53.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 67464708 + NM_001024218 GPHN 1 0.22 0.28 18 6.97 84.07 29 7.06 Yes 16 1.42 Yes 0 0 No -29 0.47 No 42 75.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 67491288 + NM_001024218 GPHN 1 0.12 0.13 8 5.51 82.95 44 5.34 No 54 0.54 No 0 0 No -24 0.64 No 27 51.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 67539630 + NM_001024218 GPHN 1 0.44 0.29 16 9.38 81.63 22 8.45 Yes 9 1.5 Yes 0 0 No -21 0.73 Yes 49 81.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67646939 + NM_001024218 GPHN 1 0.07 0.1 7 2.64 77.38 32 7.87 Yes 62 1.11 Yes 0 0 No -31 0.95 Yes 39 96.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 34859460 + NM_000175 GPI 1 0.01 0.14 9 -1.69 58.69 38 6.08 Yes 74 -0.01 No 22 0.53 Yes -20 0.46 No 40 53.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 34859703 + NM_000175 GPI 1 0.05 0.61 29 10.64 85.27 28 5.29 No 15 0.64 No 0 0 No -27 0.73 Yes 43 68.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 34871727 + NM_000175 GPI 1 0.01 0.14 7 7.28 85.34 51 6.04 Yes 10 0.35 No 0 0 No -25 0.41 No 42 59.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 34890138 + NM_000175 GPI 1 0.5 5.29 70 2.61 81.82 33 5.99 Yes 31 1.47 Yes 0 0 No -32 0.93 Yes 38 96.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48972365 - NM_015698 GPKOW 1 0.13 0.13 8 1.11 0 32 6.16 Yes 19 0.28 No 0 0 No -31 0.84 Yes 39 83.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 27853895 + NM_007266 GPN1 1 0.08 0.13 7 -7.34 0 23 5.78 Yes 10 0.9 Yes 0 0 No -32 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 27857982 + NM_007266 GPN1 1 0.36 0.69 33 -1.89 69.78 16 4.69 No 57 0.67 No 0 0 No -15 0.45 No 60 35.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27864091 + NM_007266 GPN1 1 0.18 0.28 16 -13.62 0 20 4.52 No 68 -5.76 No 21 0.86 Yes -19 0.9 Yes 59 24.02 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 27870687 + NM_007266 GPN1 1 0.72 1.39 48 1.3 73.85 21 4.9 No 27 0.28 No 19 0.88 Yes -20 0.69 Yes 50 70.03 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27870706 + NM_007266 GPN1 1 0.12 0.24 13 -0.67 0 24 5.28 No 11 1.15 Yes 0 0 No -23 0.88 Yes 47 89.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27872987 + NM_007266 GPN1 1 0.43 0.81 39 2.11 0 15 3.09 No 47 1.05 Yes 0 0 No -34 0.69 Yes 36 49.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 27206262 - NM_018066 GPN2 1 0.1 0.1 7 4.59 75.4 22 5.16 No 43 -1.27 No 26 0.55 Yes -24 0.53 No 42 65.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 27210807 - NM_018066 GPN2 1 0.46 0.5 28 9.24 89.48 24 6 Yes 30 -2.11 No 29 0.94 Yes -21 0.73 Yes 49 59.48 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 27213478 - NM_018066 GPN2 1 0.68 0.79 37 3.01 0 42 6.08 Yes 68 -1.83 No 0 0 No -32 0.84 Yes 38 69.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 27215647 - NM_018066 GPN2 1 0.77 0.67 35 8.16 92.06 17 5.74 Yes 4 1.75 Yes 21 0.94 Yes -30 0.96 Yes 40 97.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110891602 - NM_001164372 GPN3 1 0.1 0.17 10 4.61 79.08 27 4.41 No 56 0.18 No 0 0 No -18 0.53 No 52 64.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110891635 - NM_001164372 GPN3 1 0.42 0.76 31 3.03 73.1 36 6.08 Yes 58 0.61 No 30 0.62 Yes -30 0.88 Yes 40 83.34 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110891709 - NM_001164372 GPN3 1 0.14 0.25 13 5.46 76.69 40 4.42 No 73 0.14 No 34 0.39 Yes -33 0.48 No 37 61.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 132853156 + NM_001136557 GPR107 1 0.14 0.11 8 -21.72 0 26 6.29 Yes 13 0.73 No 0 0 No -26 0.42 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 132862934 + NM_001136557 GPR107 1 0.14 0.13 8 7.68 88.83 24 6 Yes 11 0.57 No 0 0 No -23 0.81 Yes 47 58.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 132870318 + NM_001136557 GPR107 1 1.15 0.21 13 7.53 78.69 28 7.2 Yes 15 0.04 No 0 0 No -21 0.59 No 43 56.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 132870345 + NM_001136557 GPR107 1 1.02 0.24 16 6.41 85.94 32 6 Yes -3 1.21 Yes 0 0 No -29 0.73 Yes 41 79.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 132870430 + NM_001136557 GPR107 1 0.55 0.14 10 5.04 81.77 26 5.5 No 57 -2.09 No 0 0 No -25 0.92 Yes 45 94.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 132891165 + NM_001136557 GPR107 1 0.71 0.39 19 5.02 80.33 25 4.1 No 46 -1.99 No 0 0 No -23 0.91 Yes 47 95.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 132892475 + NM_001136557 GPR107 1 0.74 0.39 22 10.2 83.84 48 7.43 Yes 35 2.69 Yes 0 0 No -47 0.71 Yes 23 73.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6730254 - NM_001080452 GPR108 1 0.28 0.28 14 11.09 83.82 22 6.16 Yes 9 1.7 Yes 0 0 No -21 0.97 Yes 49 95.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6731066 - NM_001080452 GPR108 1 2.08 1.65 57 -4.07 0 12 3.87 No 72 2.4 Yes 18 0.86 Yes -18 0.54 No 52 53.15 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 6731246 - NM_001080452 GPR108 1 0.35 0.35 23 7.78 88.32 28 5.1 No 15 0.39 No 27 0.91 Yes -27 0.86 Yes 43 74.77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 6731326 - NM_001080452 GPR108 1 2.25 2.21 59 8.78 81.36 23 5.91 Yes 75 1.19 Yes 22 0.64 Yes -22 0.55 No 43 69.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 6733068 - NM_001080452 GPR108 1 0.2 0.28 16 -1.48 0 12 3.87 No 7 2.35 Yes 0 0 No -45 0.71 Yes 25 91.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64055466 + NM_001170880 GPR137 1 5.7 1.03 43 8.28 76.09 32 5.66 Yes 19 1.39 Yes 31 0.72 Yes -31 0.94 Yes 39 93.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64056614 + NM_001170880 GPR137 1 1.21 0.61 27 10.94 92.22 22 4.65 No 44 -1.2 No 27 0.46 Yes -27 0.4 No 49 34.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 64056614 + NM_001170880 GPR137 1 20.68 9.64 72 10.94 92.22 22 4.65 No 44 -1.2 No 27 0.46 Yes -27 0.4 No 49 34.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 236309001 + NM_003272 GPR137B 1 4.2 4.22 69 6.43 92.89 29 5.48 No 16 0.41 No 0 0 No -28 0.82 Yes 42 88.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 236334374 + NM_003272 GPR137B 1 0.14 0.13 7 8.07 89.19 25 7.87 Yes 12 1.13 Yes 0 0 No -24 0.96 Yes 46 95.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236347081 + NM_003272 GPR137B 1 0.39 0.26 16 2.71 0 32 6.93 Yes 16 1.38 Yes 0 0 No -31 0.9 Yes 39 90.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236348625 + NM_003272 GPR137B 1 0.12 0.18 11 5.48 80.19 35 8.4 Yes 22 1.46 Yes 0 0 No -34 0.87 Yes 36 94.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236354892 + NM_003272 GPR137B 1 0.17 0.25 12 6.21 87.49 24 5.29 No 11 1.21 Yes 0 0 No -23 0.89 Yes 47 93.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236370432 + NM_003272 GPR137B 1 3.36 3.38 67 2.35 0 20 4.58 No 7 0.42 No 0 0 No -19 0.86 Yes 51 70.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 236371360 + NM_003272 GPR137B 1 0.74 0.81 38 4.59 0 14 4.28 No 20 1.19 Yes 25 0.81 Yes -32 0.82 Yes 38 60.6 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 169764594 + NM_014373 GPR160 1 0.77 0.78 33 8.51 86.28 37 7.37 Yes 24 0.06 No 0 0 No -36 0.89 Yes 34 96.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 169765646 + NM_014373 GPR160 1 0.15 0.21 11 4.74 84.41 37 6.45 Yes 24 0.91 Yes 0 0 No -27 0.53 No 40 48.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 169769895 + NM_014373 GPR160 1 0.3 0.35 19 6.85 91.79 17 5.29 No 4 1.03 Yes 0 0 No -21 0.92 Yes 49 92.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 169777643 + NM_014373 GPR160 1 0.28 0.26 16 7.67 74.44 32 7.21 Yes 19 2.16 Yes 0 0 No -31 0.73 Yes 39 87.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 169777853 + NM_014373 GPR160 1 0.2 0.21 13 2.69 64.14 29 6.43 Yes 69 -1.89 No 0 0 No -28 0.73 Yes 35 50.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 169780220 + NM_014373 GPR160 1 8.48 10.54 71 5.05 69.99 26 6.16 Yes 19 -1.38 No 25 0.89 Yes -25 0.89 Yes 45 94.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 169780990 + NM_014373 GPR160 1 1 1.35 43 9.48 99.43 45 6.63 Yes 49 -1.42 No 37 0.31 Yes -42 0.61 No 33 68.15 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 169785283 + NM_014373 GPR160 1 0.23 0.36 19 9.11 85.86 27 6.17 Yes 14 1.03 Yes 0 0 No -26 0.79 Yes 44 85.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 169794910 + NM_014373 GPR160 1 3.59 4.67 65 8.32 94.14 22 4.98 No 9 0.95 Yes 21 0.9 Yes -21 0.75 Yes 49 79.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 169798283 + NM_014373 GPR160 1 0.13 0.11 8 8.14 89.49 37 7.73 Yes 76 1.08 Yes 0 0 No -27 0.66 No 34 82.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 169800404 + NM_014373 GPR160 1 1.09 1.36 47 3.35 83 43 7.3 Yes 30 1.62 Yes 0 0 No -42 0.93 Yes 28 96.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 169800408 + NM_014373 GPR160 1 1.21 1.46 51 5.38 0 47 7.54 Yes 34 1.61 Yes 0 0 No -46 0.94 Yes 24 96.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 169801152 + NM_014373 GPR160 1 0.85 1.01 42 8.27 79.75 46 7.54 Yes 33 0.66 No 23 0.76 Yes -23 0.64 No 47 63.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 95257669 + NM_180989 GPR180 1 2.65 0.82 39 7.81 83.02 23 5.53 No 69 1.22 Yes 0 0 No -22 0.78 Yes 48 90.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 99949044 - NM_004951 GPR183 1 1.49 4.25 62 7.6 83.88 37 6.71 Yes 24 1.43 Yes 0 0 No -36 0.75 Yes 34 87.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231775686 - NM_005683 GPR55 1 4.06 0.81 30 8.97 80.89 18 4.58 No 43 0.1 No 0 0 No -17 0.61 No 37 47.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 88476735 + NM_003608 GPR65 1 0.93 0.57 27 1.69 77.29 32 6.75 Yes 9 0.59 No 0 0 No -31 0.56 No 39 70.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 147400863 + NM_016334 GPR89B 1 0.74 0.13 8 3.54 76.2 25 6.4 Yes 56 -2.18 No 0 0 No -24 0.7 Yes 46 42.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 147404709 + NM_016334 GPR89B 1 6.57 1.26 48 5.98 79.08 22 6.35 Yes 9 2.16 Yes 0 0 No -21 0.84 Yes 49 85.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 147404712 + NM_016334 GPR89B 1 5.24 0.96 44 7.29 87.08 25 6.58 Yes 12 2.15 Yes 0 0 No -24 0.88 Yes 46 86.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80010131 + NM_001330541 GPS1 1 3.38 5.24 69 9.34 89.46 20 7.07 Yes 7 2.72 Yes 19 0.91 Yes -19 0.81 Yes 51 94.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80010134 + NM_001330541 GPS1 1 0.42 0.68 33 5.76 82.83 23 7.28 Yes 10 2.72 Yes 19 0.91 Yes -22 0.87 Yes 48 94.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80010250 + NM_001330541 GPS1 1 8.79 13.54 72 5.04 79.58 27 5.57 Yes 14 0.39 No 26 0.9 Yes -26 0.88 Yes 44 91.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80010253 + NM_001330541 GPS1 1 0.53 0.79 35 -0.68 72.45 30 5.83 Yes 17 0.38 No 26 0.9 Yes -29 0.86 Yes 41 89.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80011109 + NM_001330541 GPS1 1 0.44 0.49 25 6.61 73.78 37 6 Yes 29 0.83 Yes 29 0.36 Yes -29 0.57 No 41 71.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 80011866 + NM_001330541 GPS1 1 0.38 0.65 32 8.09 87.91 25 5.48 No 44 1.36 Yes 0 0 No -24 0.85 Yes 46 68.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 80012385 + NM_001330541 GPS1 1 391.15 150.61 72 2.93 0 21 4.58 No 23 1.82 Yes 23 0.92 Yes -20 0.83 Yes 50 87.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80013037 + NM_001330541 GPS1 1 676.39 175.5 72 8.85 86.15 24 6.48 Yes 11 1.16 Yes 23 0.94 Yes -23 0.97 Yes 47 96.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80014742 + NM_001330541 GPS1 1 0.38 0.76 35 -1.83 55.27 23 6 Yes 32 1.43 Yes 0 0 No -31 0.68 Yes 39 34.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7216378 - NM_004489 GPS2 1 0.1 0.18 11 8.19 85.54 29 5.92 Yes 70 2.24 Yes 0 0 No -28 0.69 Yes 43 68.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7216417 - NM_004489 GPS2 1 1.41 2.35 65 7.54 81.66 13 6 Yes 31 2.24 Yes 0 0 No -51 0.5 No 27 69.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7216466 - NM_004489 GPS2 1 0.19 0.32 19 -2.02 0 13 4.36 No 50 -3.87 No 0 0 No -23 0.56 No 52 38.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7216995 - NM_004489 GPS2 1 0.17 0.24 15 -6.97 0 19 4.24 No 49 1.06 Yes 0 0 No -26 0.87 Yes 44 46.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7217004 - NM_004489 GPS2 1 0.94 1.26 47 2.77 0 18 4.58 No 40 1.07 Yes 0 0 No -17 0.92 Yes 53 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7217004 - NM_004489 GPS2 1 0.17 0.25 13 2.77 0 18 4.58 No 40 1.07 Yes 0 0 No -17 0.92 Yes 53 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109460997 + NM_001321038 GPSM2 1 0.79 0.25 13 9.7 88.55 23 6.09 Yes 44 2.22 Yes 0 0 No -22 0.52 No 48 49.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 46919378 + NM_133443 GPT2 1 1.93 0.43 21 10.01 87.64 31 6.08 Yes 74 -3.68 No 30 0.39 Yes -30 0.63 No 40 80.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 46957445 + NM_133443 GPT2 1 0.35 0.14 8 8.32 84.56 35 7.21 Yes 22 1.24 Yes 0 0 No -34 0.73 Yes 44 67.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1106175 + NM_001039848 GPX4 1 0.02 0.21 14 -4.64 70.14 23 5.83 Yes 10 1.2 Yes 26 0.94 Yes -22 0.96 Yes 48 93.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1106179 + NM_001039848 GPX4 1 0.31 2.9 63 0.69 0 27 6.16 Yes 14 1.18 Yes 26 0.94 Yes -26 0.96 Yes 44 94.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1106362 + NM_001039848 GPX4 1 0.02 0.21 14 0.19 0 13 4.36 No 0 0.03 No 26 0.69 Yes -18 0.69 Yes 52 54.09 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 1106376 + NM_001039848 GPX4 1 1.18 10.99 72 2.4 69.56 18 4.78 No 14 -0.83 No 26 0.69 Yes -32 0.27 No 44 57.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1106522 + NM_001039848 GPX4 1 0.1 0.9 39 -2 74 12 4.8 No 25 -2.45 No 22 0.97 Yes -6 0.28 No 64 34.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1106571 + NM_001039848 GPX4 1 0.57 5.13 71 7.19 74.76 31 5.48 No 43 2.45 Yes 26 0.71 Yes -55 0.39 No 44 47.81 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 35500329 + NM_001320036 GRAMD1A 1 0.16 0.15 8 2.3 78.95 26 6.59 Yes 13 2.2 Yes 0 0 No -25 0.64 No 45 78.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 35504258 + NM_001320036 GRAMD1A 1 0.25 0.22 13 12.11 85.28 30 4.54 No 24 0.37 No 0 0 No -29 0.54 No 53 39.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 35514334 + NM_001320036 GRAMD1A 1 0.61 0.57 30 -5.25 0 24 5.48 No 11 0.33 No 0 0 No -23 0.91 Yes 47 86.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 35514343 + NM_001320036 GRAMD1A 1 0.42 0.42 23 -1.58 0 18 4.1 No 20 0.33 No 0 0 No -32 0.52 No 38 48.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 35514600 + NM_001320036 GRAMD1A 1 0.79 0.43 26 3.66 78.1 19 4.8 No 6 0.77 No 0 0 No -18 0.86 Yes 52 79.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 35517018 + NM_001320036 GRAMD1A 1 0.27 0.17 11 4.65 79.69 23 5.39 No 69 1.85 Yes 0 0 No -22 0.95 Yes 48 91.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 125801985 + NM_001146322 GRAMD3 1 2.53 1.47 41 7.84 83.08 34 6.86 Yes 21 1.86 Yes 33 0.89 Yes -33 0.9 Yes 37 92.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 125820090 + NM_001146322 GRAMD3 1 6.41 4.4 69 2.99 74.21 23 5 No 10 1.06 Yes 22 0.97 Yes -22 0.92 Yes 48 97.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 125825973 + NM_001146322 GRAMD3 1 1.46 0.63 29 5.1 79.8 32 6.54 Yes 19 0.78 Yes 0 0 No -31 0.85 Yes 39 86.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 47038019 + NM_015124 GRAMD4 1 1.51 0.21 11 7.59 79.87 30 5.66 Yes 23 0.58 No 0 0 No -29 0.9 Yes 41 90.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 47059891 + NM_015124 GRAMD4 1 0.81 0.22 12 7.32 79.98 20 4.97 No 34 1.01 Yes 26 0.96 Yes -19 0.88 Yes 51 83.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 47072371 + NM_015124 GRAMD4 1 0.32 0.1 7 4.24 72.47 20 5.83 Yes 7 1.44 Yes 0 0 No -19 0.73 Yes 51 75.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 47073472 + NM_015124 GRAMD4 1 2.01 0.5 29 9.05 86.92 17 6.21 Yes NA NA NA 0 0 No -29 0.69 Yes 41 61.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 40355350 + NM_004810 GRAP2 1 0.37 0.11 7 9.77 87.47 28 5.29 No 35 2.17 Yes 0 0 No -27 0.77 Yes 43 76.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73314379 - NM_002086 GRB2 1 0.02 0.17 10 12.36 91.82 35 6.99 Yes 22 2.18 Yes 24 0.94 Yes -24 0.88 Yes 46 92.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73316593 - NM_002086 GRB2 1 0.11 0.99 44 8.24 87.8 15 5.74 Yes 2 1 Yes 0 0 No -26 0.44 No 44 47.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73316632 - NM_002086 GRB2 1 0.44 3.97 71 5.31 82.91 50 5.23 No 37 -0.6 No 0 0 No -34 0.87 Yes 36 85.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73317939 - NM_002086 GRB2 1 0.04 0.21 13 -12.37 0 12 3.2 No 69 -2.42 No 24 0.81 Yes -38 0.77 Yes 32 52.66 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 73372595 - NM_002086 GRB2 1 0.05 0.36 19 8.59 88.56 27 6.97 Yes 14 1.96 Yes 0 0 No -30 0.54 No 40 77.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 73383876 - NM_002086 GRB2 1 0.02 0.17 11 11.2 92.17 41 6.86 Yes 28 0.83 Yes 40 0.2 Yes -40 0.71 Yes 30 91.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73393786 - NM_002086 GRB2 1 0.04 0.13 8 8.1 91.41 27 4.67 No 35 1.07 Yes 0 0 No -26 0.9 Yes 44 85.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37432529 + NM_012203 GRHPR 1 0.14 0.63 31 -4.26 47.71 34 7.5 Yes 21 0.63 No 33 0.53 Yes -33 0.42 No 37 38.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 37432533 + NM_012203 GRHPR 1 0.41 1.58 56 -3.97 0 38 7.73 Yes 25 0.62 No 0 0 No -20 0.37 No 33 28.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 37434042 + NM_012203 GRHPR 1 0.16 0.6 31 9.91 73.58 37 6 Yes 42 0.45 No 27 0.31 Yes -27 0.35 No 34 34.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 37434191 + NM_012203 GRHPR 1 0.17 0.65 34 4.55 83.32 19 5.39 No 67 -1.15 No 0 0 No -22 0.9 Yes 48 85.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37434834 + NM_012203 GRHPR 1 0.44 1.65 51 7.1 76.35 12 5.49 No 65 0.35 No 0 0 No -25 0.76 Yes 45 65.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 120703374 + NM_014619 GRIK4 1 2.17 0.17 11 6.75 77.09 34 6.32 Yes 21 0.66 No 0 0 No -33 0.47 No 44 70.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 145066069 + NM_000837 GRINA 1 0.05 0.24 13 5.85 82.08 10 4.8 No -3 1.49 Yes 0 0 No -41 0.73 Yes 29 54.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 145066117 + NM_000837 GRINA 1 0.11 0.42 20 -2.03 82.71 40 6.03 Yes 27 1.95 Yes 0 0 No -30 0.62 No 31 85.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 145066123 + NM_000837 GRINA 1 0.08 0.38 16 -6.52 0 12 3.87 No 33 1.93 Yes 0 0 No -45 0.7 Yes 25 86.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145066197 + NM_000837 GRINA 1 0.04 0.17 10 8.66 81.22 21 6.91 Yes 8 0.53 No 0 0 No -34 0.5 No 50 71.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 145066869 + NM_000837 GRINA 1 0.07 0.36 19 2.23 0 19 4.36 No 6 0.98 Yes 0 0 No -18 0.44 No 35 66.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 48831704 - NM_020137 GRIPAP1 1 7.21 4.1 70 1.65 78.79 22 5.19 No 23 -0.85 No 0 0 No -20 0.26 No 50 64.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 48835139 - NM_020137 GRIPAP1 1 0.35 0.33 18 2.24 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.61 No 51 71.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 48835142 - NM_020137 GRIPAP1 1 1.36 1.1 46 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -25 0.44 No 43 55.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 48837269 - NM_020137 GRIPAP1 1 0.15 0.14 8 5.5 90.92 28 5.29 No 70 0.68 No 0 0 No -27 0.66 No 43 39.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 48839851 - NM_020137 GRIPAP1 1 0.18 0.13 8 -13.68 67.16 26 6.08 Yes 13 1.24 Yes 0 0 No -25 0.92 Yes 45 89.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48839883 - NM_020137 GRIPAP1 1 1.87 1.56 57 2.54 68.25 13 5.66 Yes 71 -1.58 No 23 0.92 Yes -25 0.76 Yes 45 80.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48842653 - NM_020137 GRIPAP1 1 1.41 1.75 56 10.28 88.27 28 7.18 Yes 33 0.22 No 0 0 No -27 0.55 No 43 82.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 48854620 - NM_020137 GRIPAP1 1 0.29 0.22 14 8.21 80.24 27 5.38 No 63 0.44 No 29 0.83 Yes -26 0.56 No 48 56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 48857077 - NM_020137 GRIPAP1 1 0.16 0.13 8 5.73 89.33 27 5.2 No 40 1.12 Yes 0 0 No -53 0.62 No 17 81.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 48857097 - NM_020137 GRIPAP1 1 2.62 1.94 55 2.84 0 33 6.9 Yes 20 1.12 Yes 0 0 No -33 0.87 Yes 37 84.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48857371 - NM_020137 GRIPAP1 1 0.32 0.24 15 -0.39 71.28 23 5.29 No 57 -0.96 No 0 0 No -23 0.79 Yes 47 32.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67044751 + NM_001619 GRK2 1 0.13 0.22 13 -0.4 0 18 4.24 No 70 1.16 Yes 0 0 No -31 0.58 No 39 66.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67045266 + NM_001619 GRK2 1 0.11 0.28 17 10.31 86.15 40 4.94 No 27 -0.16 No 0 0 No -39 0.56 No 31 57.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67046861 + NM_001619 GRK2 1 0.5 1.51 53 5.63 69.9 46 6.7 Yes NA NA NA 24 0.83 Yes -37 0.64 No 51 42.25 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 67046872 + NM_001619 GRK2 1 0.06 0.22 10 0.5 0 9 4.44 No -4 0.22 No 24 0.83 Yes -48 0.42 No 40 26.69 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 67047965 + NM_001619 GRK2 1 0.21 0.61 26 5.14 74.82 25 6.08 Yes 55 -2.59 No 0 0 No -32 0.49 No 38 69.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67047968 + NM_001619 GRK2 1 0.09 0.26 14 3.62 87.02 11 6.4 Yes -2 0.21 No 0 0 No -28 0.5 No 35 69.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67049745 + NM_001619 GRK2 1 0.06 0.24 14 -0.94 0 23 5.83 Yes 65 1.15 Yes 0 0 No -22 0.94 Yes 48 93.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67050228 + NM_001619 GRK2 1 0.03 0.11 7 -1.44 0 9 3.87 No 63 0.98 Yes 25 0.27 Yes -34 0.89 Yes 36 93.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67051735 + NM_001619 GRK2 1 0.61 1.86 61 -8.02 68.78 42 6.48 Yes 0 0.7 No 18 0.72 Yes -24 0.67 Yes 41 44.85 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 67051744 + NM_001619 GRK2 1 0.15 0.47 26 -7.09 0 19 4.24 No 9 0.11 No 0 0 No -33 0.63 No 32 28.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67051747 + NM_001619 GRK2 1 0.11 0.31 20 -4.43 0 22 4.58 No 52 -1.57 No 0 0 No -36 0.62 No 17 26.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67052272 + NM_001619 GRK2 1 0.05 0.15 10 -1.2 48.93 13 5.57 Yes 0 -0.75 No 0 0 No -24 0.7 Yes 58 28.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67052548 + NM_001619 GRK2 1 2.31 6.35 71 1.34 73.43 33 8.66 Yes 20 0.9 Yes 0 0 No -32 0.72 Yes 38 94.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 25962506 + NM_005160 GRK3 1 0.28 0.19 12 9.76 93.14 28 5.57 Yes 33 0.76 No 0 0 No -27 0.75 Yes 43 89.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 25990265 + NM_005160 GRK3 1 1.17 0.76 39 7.39 77.83 32 5.97 Yes 70 0.86 Yes 0 0 No -31 0.55 No 39 67.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 26001716 + NM_005160 GRK3 1 0.46 0.46 21 8.96 79.78 32 4.43 No 63 0.69 No 0 0 No -34 0.68 Yes 36 73.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 26010798 + NM_005160 GRK3 1 0.16 0.17 8 4.77 78.3 17 6.02 Yes 67 -2.48 No 0 0 No -30 0.88 Yes 40 94.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 26033993 + NM_005160 GRK3 1 0.26 0.29 16 7.07 89.44 25 6.22 Yes 12 1.11 Yes 0 0 No -24 0.7 Yes 46 87.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 26037983 + NM_005160 GRK3 1 0.39 0.38 20 4.25 69.55 22 3.84 No 18 -2.74 No 0 0 No -21 0.9 Yes 49 95.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 26057589 + NM_005160 GRK3 1 0.1 0.17 12 -0.77 79.17 23 4.61 No 10 0.01 No 0 0 No -19 0.63 No 51 47.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 26062599 + NM_005160 GRK3 1 5.73 4.79 70 10.54 96.28 26 4.11 No 50 1.84 Yes 0 0 No -20 0.69 Yes 50 76.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 26070394 + NM_005160 GRK3 1 0.09 0.15 10 0.69 0 27 6.37 Yes 14 1.21 Yes 30 0.85 Yes -26 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 26075122 + NM_005160 GRK3 1 1.26 2.5 63 9.64 91.98 17 6.52 Yes 4 1.33 Yes 0 0 No -27 0.88 Yes 43 89.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 26077012 + NM_005160 GRK3 1 0.08 0.18 11 10.14 83.57 9 6.37 Yes 63 0.47 No 0 0 No -31 0.67 Yes 39 73.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 26091641 + NM_005160 GRK3 1 0.63 0.85 31 9.08 87.64 34 6.55 Yes 21 1.03 Yes 0 0 No -33 0.45 No 38 42.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 26094893 + NM_005160 GRK3 1 0.18 0.25 15 10.83 87.15 34 5.92 Yes 36 1.23 Yes 0 0 No -28 0.45 No 42 70.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 26096067 + NM_005160 GRK3 1 0.28 0.35 17 3.33 76.15 45 7.31 Yes 58 1.24 Yes 0 0 No -30 0.8 Yes 40 88.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 26098782 + NM_005160 GRK3 1 0.65 0.85 37 2.94 74.03 34 5.9 Yes 3 0.97 Yes 0 0 No -33 0.84 Yes 37 94.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 26098808 + NM_005160 GRK3 1 1.53 1.97 59 7.25 84.53 16 5.17 No 29 0.96 Yes 0 0 No -59 0.64 No 41 51.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 26111974 + NM_005160 GRK3 1 1.25 2.19 57 10.73 87.82 22 3.74 No 55 1.29 Yes 0 0 No -28 0.53 No 42 63.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 121178600 + NM_005308 GRK5 1 0.31 0.14 9 5.23 89.28 15 5.17 No 2 1.28 Yes 0 0 No -20 0.77 Yes 50 73.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121185743 + NM_005308 GRK5 1 0.26 0.13 9 9.46 85.4 26 5.48 No 13 1.41 Yes 0 0 No -25 0.96 Yes 45 97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121196506 + NM_005308 GRK5 1 0.35 0.15 11 4.38 92.67 21 4.8 No 42 -2.38 No 0 0 No -20 0.77 Yes 50 55.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 176857671 + NM_002082 GRK6 1 0.35 0.21 15 7.82 83.11 24 6.24 Yes 11 1.4 Yes 28 0.86 Yes -23 0.96 Yes 47 95.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176857676 + NM_002082 GRK6 1 0.43 0.29 16 4.74 0 29 6.62 Yes 16 1.36 Yes 28 0.86 Yes -28 0.96 Yes 42 95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176859011 + NM_002082 GRK6 1 0.17 0.18 11 0.02 74.13 21 4.46 No -2 0.16 No 0 0 No -21 0.55 No 50 61.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 176860316 + NM_002082 GRK6 1 0.53 0.86 43 5.02 80.87 26 5.48 No 61 -2.15 No 33 0.89 Yes -25 0.94 Yes 45 93.03 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176860351 + NM_002082 GRK6 1 1.66 3.03 65 -1.06 0 38 6.32 Yes 25 1.08 Yes 0 0 No -37 0.92 Yes 33 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176860856 + NM_002082 GRK6 1 1.15 2.78 64 0.65 84.31 20 4.8 No 50 -1.61 No 0 0 No -19 0.72 Yes 47 73.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 176867916 + NM_002082 GRK6 1 1.11 1.42 55 1.85 78.79 20 4.9 No 7 0.35 No 22 0.92 Yes -19 0.85 Yes 51 81.85 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176868245 + NM_002082 GRK6 1 5.17 3.32 63 9.82 94.82 23 8.77 Yes 10 1.22 Yes 22 0.95 Yes -22 0.96 Yes 48 96.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42422977 + NM_002087 GRN 1 0.29 0.72 37 5.08 73.3 25 5.2 No 12 1.14 Yes 24 0.97 Yes -24 0.88 Yes 46 86.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42423456 + NM_002087 GRN 1 0.29 0.81 38 8.88 79.63 34 5.83 Yes 53 1.12 Yes 24 0.66 Yes -24 0.63 No 46 43.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 42426529 + NM_002087 GRN 1 0.13 0.43 23 0 0 28 5.83 Yes 43 -4.03 No 23 0.36 Yes -25 0.57 No 45 85.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 42427793 + NM_002087 GRN 1 0.05 0.25 16 -13.44 0 14 4.36 No 1 -1.02 No 22 0.71 Yes -12 0.26 No 55 35.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 42427825 + NM_002087 GRN 1 0.03 0.18 12 0.08 76.24 19 5 No 6 0.54 No 22 0.71 Yes -18 0.67 Yes 52 63.96 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 42427829 + NM_002087 GRN 1 0.09 0.57 20 -2.41 0 23 5.39 No 10 0.53 No 22 0.71 Yes -35 0.6 No 48 74.64 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 42429768 + NM_002087 GRN 1 0.12 0.54 26 -1.96 68.84 39 6.67 Yes NA NA NA 0 0 No -28 0.57 No 27 27.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 42430083 + NM_002087 GRN 1 0.03 0.14 8 5.31 80.63 40 6.72 Yes 27 1.35 Yes 30 0.4 Yes -39 0.71 Yes 31 84.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 71690079 - NM_002092 GRSF1 1 0.11 0.4 21 0.54 0 16 3.96 No 15 1.45 Yes 0 0 No -33 0.41 No 43 44.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 71691148 - NM_002092 GRSF1 1 0.05 0.25 11 -9.01 0 24 7.4 Yes 11 1.38 Yes 0 0 No -23 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 71697352 - NM_002092 GRSF1 1 0.42 1.13 48 2.55 64.17 26 4.87 No 13 0.77 No 0 0 No -25 0.77 Yes 45 72.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 71697416 - NM_002092 GRSF1 1 0.05 0.18 10 -6.12 0 18 4.47 No 41 -4.94 No 26 0.61 Yes -23 0.52 No 23 18.48 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 71698942 - NM_002092 GRSF1 1 0.11 0.32 20 6.95 87.06 29 5.8 Yes 58 0.37 No 23 0.24 Yes -26 0.59 No 42 48.06 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 66031443 - NR_111973 GS1-124K5.11 1 1.32 0.21 12 8.89 77.85 25 6.15 Yes 12 2.05 Yes 0 0 No -24 0.82 Yes 46 88.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66032647 - NR_111973 GS1-124K5.11 1 0.64 0.11 7 9.11 81.33 34 6.22 Yes 5 0.28 No 0 0 No -33 0.82 Yes 37 63.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 76943821 - NM_017439 GSAP 1 0.5 0.13 7 10.27 91.4 19 6.08 Yes 6 1.98 Yes 23 0.8 Yes -18 0.74 Yes 52 79.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 76947062 - NM_017439 GSAP 1 0.96 0.24 10 6.76 93.1 18 4.9 No 13 0.55 No 0 0 No -25 0.92 Yes 45 92.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 76960166 - NM_017439 GSAP 1 2.24 0.43 23 9.23 89.4 25 4.29 No 54 1.53 Yes 0 0 No -24 0.83 Yes 46 79.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 76977301 - NM_017439 GSAP 1 3.4 0.53 24 9.29 88.27 31 5.19 No 43 0.68 No 0 0 No -30 0.94 Yes 40 96.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 76981007 - NM_017439 GSAP 1 2.76 0.42 21 5.69 76.18 26 6.06 Yes 13 1.92 Yes 25 0.91 Yes -25 0.72 Yes 45 86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 76983013 - NM_017439 GSAP 1 1.51 0.42 18 2.99 78.75 26 6.16 Yes 13 0.6 No 25 0.88 Yes -25 0.95 Yes 45 95.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 76999611 - NM_017439 GSAP 1 0.54 0.15 11 6.83 85.02 20 5.58 Yes 7 1.29 Yes 0 0 No -19 0.74 Yes 51 85.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 77005158 - NM_017439 GSAP 1 1.39 0.29 19 7.48 85.05 50 6.28 Yes 48 0.47 No 0 0 No -40 0.56 No 30 61.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 77009318 - NM_017439 GSAP 1 4.03 0.74 35 6.06 74.69 31 6.83 Yes 6 0.37 No 0 0 No -24 0.56 No 46 55.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 77028855 - NM_017439 GSAP 1 6.47 1.51 48 8.38 84.87 40 7.74 Yes 27 2.18 Yes 0 0 No -39 0.87 Yes 31 96.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144641691 + NM_024736 GSDMD 1 0.71 0.31 18 5.83 76.01 27 3.97 No 3 0.07 No 0 0 No -24 0.63 No 46 69.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 144641954 + NM_024736 GSDMD 1 0.14 0.13 9 -1.31 0 11 4.12 No 15 0.11 No 0 0 No -27 0.9 Yes 43 80.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 144644839 + NM_024736 GSDMD 1 1.18 1.08 45 -4.41 0 18 4.12 No 21 1.92 Yes 21 0.91 Yes -33 0.77 Yes 37 77.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 85684022 + NM_014615 GSE1 1 0.88 0.51 25 3.08 81.68 26 5.2 No 13 0.65 No 0 0 No -25 0.97 Yes 45 97.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 85691009 + NM_014615 GSE1 1 0.45 0.28 18 5.2 83.96 36 6.86 Yes 23 0.36 No 0 0 No -29 0.42 No 35 51.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 85696952 + NM_014615 GSE1 1 0.11 0.1 7 1.55 65.21 27 6.9 Yes 14 0.78 Yes 24 0.67 Yes -26 0.75 Yes 44 83.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 85696991 + NM_014615 GSE1 1 2.05 1.67 58 0.62 70.97 13 4.56 No 53 0.76 No 0 0 No -26 0.7 Yes 44 72.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 85705625 + NM_014615 GSE1 1 0.13 0.14 8 5.87 86.72 29 5.66 Yes 16 0.21 No 0 0 No -28 0.79 Yes 42 91.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 85705787 + NM_014615 GSE1 1 0.26 0.26 16 4.48 86.37 18 7 Yes 5 1.17 Yes 28 0.37 Yes -33 0.35 No 37 50.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 42738783 - NM_019884 GSK3A 1 0.07 0.18 12 5.87 82.75 15 5.57 Yes 64 0.88 Yes 0 0 No -24 0.72 Yes 46 80.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42740294 - NM_019884 GSK3A 1 0.13 0.35 20 7.24 85.86 32 4.42 No 51 -3.19 No 0 0 No -23 0.86 Yes 47 91.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119599346 - NM_002093 GSK3B 1 0.1 0.18 12 3.96 0 17 4.58 No 4 0.74 No 0 0 No -23 0.44 No 47 61.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 119625764 - NM_002093 GSK3B 1 0.53 0.85 36 10.05 87.48 21 5.95 Yes 8 0.27 No 0 0 No -24 0.67 Yes 46 69.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119631598 - NM_002093 GSK3B 1 0.07 0.17 11 6.79 79.05 32 6.67 Yes 50 -2.4 No 0 0 No -32 0.58 No 38 52.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 119631648 - NM_002093 GSK3B 1 0.26 0.5 28 -2.82 0 13 4.36 No 59 0.8 Yes 0 0 No -49 0.52 No 20 60.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 119695393 - NM_002093 GSK3B 1 0.1 0.15 10 12.3 93.08 26 6 Yes 13 1.19 Yes 0 0 No -25 0.64 No 45 79.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 119700973 - NM_002093 GSK3B 1 0.11 0.22 15 11.14 89.62 40 7.57 Yes 27 1.7 Yes 0 0 No -34 0.6 No 36 80.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 119719571 - NM_002093 GSK3B 1 0.39 0.82 39 6.43 77.74 30 6.27 Yes 17 0.51 No 0 0 No -29 0.79 Yes 41 72.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119721084 - NM_002093 GSK3B 1 0.06 0.11 7 -7.43 77.85 31 6.02 Yes 38 -2.32 No 0 0 No -30 0.65 No 40 63.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 11970029 - NM_001130007 GSPT1 1 0.05 0.28 15 -1 0 35 5.85 Yes 45 0.55 No 0 0 No -34 0.57 No 36 48.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 11973417 - NM_001130007 GSPT1 1 0.11 0.56 25 -1.74 0 26 6.08 Yes 13 0.61 No 0 0 No -25 0.8 Yes 45 93.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 11973593 - NM_001130007 GSPT1 1 0.02 0.14 10 3.97 84.41 52 7.21 Yes 39 1.02 Yes 0 0 No -45 0.41 No 25 64.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 11974129 - NM_001130007 GSPT1 1 0.06 0.35 16 4.08 83.76 20 4.95 No 51 -3.47 No 0 0 No -25 0.27 No 39 37.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 11980467 - NM_001130007 GSPT1 1 0.05 0.25 15 -14.95 0 35 5.69 Yes 64 0.89 Yes 0 0 No -34 0.39 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 11990640 - NM_001130007 GSPT1 1 22.64 64.46 72 4.38 83.06 25 4.75 No 31 0.6 No 21 0.81 Yes -24 0.79 Yes 46 88.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 30562776 - NM_001195104 GSR 1 0.04 0.17 10 4.33 80.84 23 6.4 Yes 55 -2.18 No 0 0 No -22 0.9 Yes 48 87.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 30564622 - NM_001195104 GSR 1 0.05 0.13 8 4.57 89.86 26 5.1 No 46 0.62 No 0 0 No -25 0.77 Yes 45 65.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 30565890 - NM_001195104 GSR 1 0.08 0.18 11 9.38 87.12 28 6.83 Yes 65 -3.28 No 0 0 No -28 0.47 No 42 38.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 30584110 - NM_001195104 GSR 1 0.13 0.17 7 5.34 86.34 21 5.6 Yes 63 1.74 Yes 0 0 No -20 0.81 Yes 50 67.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 33517041 - NM_001322494 GSS 1 0.17 0.24 15 -7.57 66.84 39 6.27 Yes 14 0.74 No 0 0 No -29 0.67 Yes 35 55.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 33525116 - NM_001322494 GSS 1 0.08 0.11 7 3.53 84.73 18 5.9 Yes 65 -3.87 No 0 0 No -23 0.64 No 47 61.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33530389 - NM_001322494 GSS 1 0.65 1.03 40 0.29 75.94 17 4.8 No 51 0.34 No 0 0 No -16 0.61 No 54 69.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33530485 - NM_001322494 GSS 1 0.42 0.65 26 9.95 75.12 27 6.16 Yes 31 1.47 Yes 0 0 No -26 0.89 Yes 44 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33533855 - NM_001322494 GSS 1 0.36 0.39 21 6.96 76.81 27 6.78 Yes 14 1.52 Yes 0 0 No -26 0.91 Yes 44 93.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 142962027 + NM_001143679 GSTK1 1 0.16 0.47 25 -23.92 0 13 3.87 No 57 -4.44 No 0 0 No -13 0.4 No 29 34.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 142962038 + NM_001143679 GSTK1 1 0.06 0.15 11 -0.66 0 14 4.47 No 68 -3.9 No 0 0 No -17 0.42 No 53 32.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 142964991 + NM_001143679 GSTK1 1 0.12 0.24 12 8.19 85.38 30 6.79 Yes 17 1.6 Yes 0 0 No -29 0.89 Yes 41 87.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 142965883 + NM_001143679 GSTK1 1 0.12 0.31 19 -16.29 75.58 10 5.74 Yes 28 -0.54 No 0 0 No -28 0.75 Yes 42 64.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 110212257 + NM_000848 GSTM2 1 1.09 0.17 8 10.6 88.57 27 5.14 No 49 1.37 Yes 26 0.51 Yes -22 0.65 No 44 60.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 110199971 + NM_147148 GSTM4 1 1.43 0.71 34 10.18 86.17 21 6.63 Yes 8 1.96 Yes 20 0.92 Yes -20 0.88 Yes 50 87.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 110200372 + NM_147148 GSTM4 1 0.15 0.1 7 -23.36 0 9 3.84 No 64 -1.66 No 29 0.84 Yes -8 0.45 No 22 45.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 106014924 + NM_004832 GSTO1 1 0.05 0.17 12 -5.48 0 29 9.49 Yes 16 1.43 Yes 0 0 No -28 0.82 Yes 42 88.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 106017123 + NM_004832 GSTO1 1 0.43 1.69 60 4.98 0 38 6.88 Yes 32 0.6 No 0 0 No -37 0.91 Yes 33 94.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 106025669 + NM_004832 GSTO1 1 0.46 1.72 53 6.49 87.11 21 5.78 Yes 46 1.55 Yes 0 0 No -29 0.57 No 50 46.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67351634 + NM_000852 GSTP1 1 0.01 0.19 11 6.21 80.54 22 6.24 Yes 74 1.51 Yes 0 0 No -19 0.76 Yes 51 67.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 67351967 + NM_000852 GSTP1 1 0.12 2.69 63 6.51 77.03 41 4.66 No NA NA NA 0 0 No -58 0.53 No 12 50.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67352508 + NM_000852 GSTP1 1 0.09 1.72 57 10.97 87.88 36 7.07 Yes 23 1.21 Yes 35 0.89 Yes -35 0.84 Yes 35 93.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67352567 + NM_000852 GSTP1 1 0.03 0.64 31 4.41 80.99 17 5.2 No 4 1.4 Yes 31 0.85 Yes -16 0.67 Yes 54 73.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67353577 + NM_000852 GSTP1 1 0.36 8.29 72 -12.02 67.72 25 6.01 Yes 40 -3.12 No 0 0 No -20 0.74 Yes 50 72.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 77793130 + NM_001312660 GSTZ1 1 0.16 0.13 7 4.42 81.54 22 5 No 62 0.23 No 0 0 No -26 0.67 Yes 44 60.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 77794210 + NM_001312660 GSTZ1 1 0.16 0.13 7 8.7 85.96 25 6.08 Yes 72 -3.1 No 0 0 No -30 0.31 No 40 45.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 144769382 - NM_001284233 GTDC1 1 0.93 0.4 23 7.88 78.97 57 9.85 Yes 44 2.75 Yes 0 0 No -28 0.82 Yes 42 67.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 144830111 - NM_001284233 GTDC1 1 0.23 0.11 7 9.91 86.71 27 5.38 No 14 1.32 Yes 0 0 No -26 0.77 Yes 44 87.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 144841376 - NM_001284233 GTDC1 1 0.39 0.18 11 7.76 77.67 25 5.03 No 30 1.24 Yes 0 0 No -28 0.6 No 46 70.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 144885890 - NM_001284233 GTDC1 1 0.72 0.31 17 6.47 92.32 23 5.2 No 59 1.52 Yes 22 0.93 Yes -22 0.78 Yes 48 93.38 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 144887656 - NM_001284233 GTDC1 1 0.32 0.11 7 11.47 95.65 26 4.46 No 21 0.5 No 0 0 No -25 0.47 No 45 78.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 144934808 - NM_001284233 GTDC1 1 1.43 0.6 30 1.86 67.94 40 7.29 Yes 33 -1.97 No 30 0.43 Yes -39 0.31 No 40 38.44 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 144936528 - NM_001284233 GTDC1 1 14.08 6.21 71 8.66 91.95 31 5.26 No 5 2.13 Yes 30 0.67 Yes -30 0.73 Yes 40 85.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 144940044 - NM_001284233 GTDC1 1 1.23 0.5 23 5.52 85.02 24 6.81 Yes 11 1.81 Yes 0 0 No -23 0.69 Yes 47 85.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 144968805 - NM_001284233 GTDC1 1 6.47 2.78 64 10.6 91.78 30 6.56 Yes 17 1.22 Yes 30 0.76 Yes -30 0.79 Yes 40 84.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 81646667 - NM_001278940 GTF2A1 1 0.08 0.1 7 -2.59 0 11 4.12 No 35 1.18 Yes 0 0 No -35 0.69 Yes 35 79.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 81662533 - NM_001278940 GTF2A1 1 0.06 0.1 7 5.35 79.57 24 5.04 No 68 0.6 No 0 0 No -24 0.58 No 47 72.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 81682880 - NM_001278940 GTF2A1 1 0.15 0.19 12 4.01 78.49 20 4.68 No 55 0.82 Yes 24 0.69 Yes -26 0.42 No 44 49.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 59931356 - NM_001320930 GTF2A2 1 0.02 0.14 10 -10.44 0 33 6.64 Yes 25 0.86 Yes 0 0 No -32 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 59931365 - NM_001320930 GTF2A2 1 0.02 0.13 9 0.72 0 24 5.9 Yes 16 0.82 Yes 31 0.73 Yes -23 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 59942631 - NM_001320930 GTF2A2 1 0.17 0.61 32 2.09 72.2 31 5.67 Yes 71 -2.77 No 0 0 No -28 0.35 No 40 65.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59942964 - NM_001320930 GTF2A2 1 1.43 7.82 72 5.59 0 12 4.24 No 15 1.47 Yes 31 0.9 Yes -39 0.54 No 43 50.95 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 89323024 - NM_001514 GTF2B 1 0.11 0.22 15 2.05 68.54 41 5.12 No 28 0.02 No 0 0 No -40 0.45 No 30 44.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 89324471 - NM_001514 GTF2B 1 0.18 0.33 18 5.24 83.88 23 5.06 No 57 0.18 No 27 0.82 Yes -22 0.56 No 43 52.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 89347671 - NM_001514 GTF2B 1 2.33 4.58 68 4.85 84.95 29 5.22 No 16 0.34 No 0 0 No -24 0.49 No 47 41.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 89348323 - NM_001514 GTF2B 1 0.06 0.13 7 3.79 74.13 32 8.67 Yes 19 0.96 Yes 0 0 No -31 0.86 Yes 39 87.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 120462140 + NM_005513 GTF2E1 1 0.7 0.36 19 8.41 84 49 7.98 Yes 36 2.39 Yes 0 0 No -48 0.6 No 22 58.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 120475933 + NM_005513 GTF2E1 1 0.27 0.18 11 11.01 93.11 32 7.73 Yes 74 1.05 Yes 0 0 No -27 0.48 No 44 60.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 120489604 + NM_005513 GTF2E1 1 0.31 0.21 12 6.56 92.69 24 5.89 Yes 44 1.86 Yes 0 0 No -29 0.54 No 41 46.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 30438540 - NM_002095 GTF2E2 1 0.07 0.17 12 0.9 55.37 53 7.83 Yes 40 0.85 Yes 0 0 No -33 0.36 No 24 56.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 30442676 - NM_002095 GTF2E2 1 1.22 2.75 62 5.5 90.92 28 5.29 No 74 1.61 Yes 27 0.75 Yes -27 0.83 Yes 43 62.11 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 30459452 - NM_002095 GTF2E2 1 0.34 0.83 36 9.59 85.48 28 5.48 No 70 -5.11 No 0 0 No -27 0.68 Yes 47 40.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 30471000 - NM_002095 GTF2E2 1 0.2 0.39 22 13.83 96.79 57 7.55 Yes 58 2.04 Yes 0 0 No -53 0.6 No 17 79.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 30472231 - NM_002095 GTF2E2 1 0.04 0.1 7 -17.11 0 23 5.81 Yes 10 0.75 No 0 0 No -25 0.88 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 30477450 - NM_002095 GTF2E2 1 0.04 0.11 7 12.53 84.88 87 8.28 Yes 74 2.06 Yes 0 0 No -36 0.62 No 34 84.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 30485623 - NM_002095 GTF2E2 1 0.13 0.31 17 10.2 79.9 15 5.64 Yes 47 0.82 Yes 0 0 No -22 0.61 No 48 77.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 30512707 - NM_002095 GTF2E2 1 0.2 0.24 13 3.01 0 31 5.74 Yes 47 0.76 No 0 0 No -26 0.89 Yes 44 90.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 6380487 - NM_002096 GTF2F1 1 0.07 0.13 9 -1.34 0 13 4.26 No 28 2.04 Yes 30 0.87 Yes -40 0.84 Yes 30 75.85 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 6381051 - NM_002096 GTF2F1 1 0.12 0.18 10 -4.04 62.85 32 6.63 Yes 19 1.82 Yes 0 0 No -31 0.87 Yes 39 83.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6381624 - NM_002096 GTF2F1 1 0.86 1.39 43 2.33 70.54 29 6.78 Yes 16 1.65 Yes 0 0 No -28 0.97 Yes 42 94.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6383480 - NM_002096 GTF2F1 1 0.13 0.21 14 0.75 73.62 12 5.1 No -1 0.54 No 0 0 No -10 0.51 No 59 36.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 6385914 - NM_002096 GTF2F1 1 0.1 0.18 13 8.84 95.08 26 7.55 Yes 13 1.36 Yes 0 0 No -25 0.95 Yes 45 95.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6392422 - NM_002096 GTF2F1 1 0.17 0.47 25 9.87 94.44 25 4.98 No 12 0.49 No 24 0.94 Yes -24 0.92 Yes 46 93.86 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 45696151 + NM_004128 GTF2F2 1 0.31 0.35 16 9.58 97.95 24 5.23 No 4 0.91 Yes 0 0 No -22 0.44 No 48 68.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 45795000 + NM_004128 GTF2F2 1 0.44 0.72 33 3.82 0 20 4.58 No 7 1.77 Yes 19 0.95 Yes -19 0.85 Yes 51 93.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 45857556 + NM_004128 GTF2F2 1 0.25 0.42 24 5.38 79.6 43 5.18 No 2 0.59 No 29 0.64 Yes -42 0.74 Yes 28 72.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 18355501 + NM_001142307 GTF2H1 1 0.25 0.4 21 8.62 87.73 37 6.16 Yes 74 1.4 Yes 0 0 No -36 0.61 No 48 56.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 18357394 + NM_001142307 GTF2H1 1 0.16 0.26 17 1.95 72.22 23 6.56 Yes 10 1.67 Yes 0 0 No -22 0.84 Yes 48 86.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 18357399 + NM_001142307 GTF2H1 1 0.2 0.35 16 -3.89 0 28 6.93 Yes 15 1.64 Yes 0 0 No -27 0.86 Yes 43 83.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 18359686 + NM_001142307 GTF2H1 1 0.1 0.1 7 7.87 90.35 23 5.1 No 61 -2.41 No 0 0 No -23 0.94 Yes 47 94.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 18369380 + NM_001142307 GTF2H1 1 0.26 0.39 24 -3.37 79.96 28 7.31 Yes 15 1.84 Yes 0 0 No -33 0.51 No 37 76.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 18369383 + NM_001142307 GTF2H1 1 0.1 0.15 9 -5.4 0 31 7.46 Yes 18 1.84 Yes 0 0 No -36 0.62 No 34 78.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 18374429 + NM_001142307 GTF2H1 1 0.26 0.32 19 6.67 80.26 31 7.16 Yes 18 1.3 Yes 0 0 No -30 0.55 No 36 60.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70357134 - NM_001515 GTF2H2 1 6.5 1.18 39 -11.85 66.63 26 6.02 Yes 13 0.3 No 0 0 No -29 0.66 No 41 70.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 68862417 + NM_001098728 GTF2H2C 1 0.98 0.17 11 -11.85 66.63 26 6.02 Yes 13 0.3 No 0 0 No -29 0.66 No 41 69.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 124123840 + NM_001516 GTF2H3 1 0.42 0.25 14 3.71 76.09 20 4.48 No 53 1.41 Yes 32 0.55 Yes -23 0.54 No 47 70.68 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 124124503 + NM_001516 GTF2H3 1 0.53 0.76 36 5.56 78.31 18 5.83 Yes 68 1.34 Yes 30 0.82 Yes -25 0.65 No 45 64.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 124137070 + NM_001516 GTF2H3 1 2.61 3.13 69 2.79 73.33 27 6.24 Yes 14 0.6 No 26 0.43 Yes -39 0.58 No 31 41.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 124143976 + NM_001516 GTF2H3 1 0.84 0.81 36 9.15 85.87 35 5.88 Yes -3 1.12 Yes 22 0.72 Yes -28 0.55 No 42 57.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 124140345 + NM_001516 GTF2H3 1 0.16 0.21 13 6.11 75.62 16 5.65 Yes 3 1.26 Yes 0 0 No -19 0.66 No 51 63.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 124140744 + NM_001516 GTF2H3 1 0.1 0.1 7 5.3 66.79 18 6.15 Yes 75 0.82 Yes 0 0 No -20 0.47 No 39 44.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 124143976 + NM_001516 GTF2H3 1 6.16 5.99 72 9.15 85.87 35 5.88 Yes -3 1.12 Yes 22 0.72 Yes -28 0.55 No 42 57.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 124144022 + NM_001516 GTF2H3 1 0.34 0.33 19 4.9 68.48 31 5.77 Yes 43 1.09 Yes 23 0.72 Yes -30 0.94 Yes 40 97.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124144557 + NM_001516 GTF2H3 1 0.55 0.89 39 7.8 86.9 19 5 No 60 1.04 Yes 37 0.65 Yes -18 0.93 Yes 52 94.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124144717 + NM_001516 GTF2H3 1 0.18 0.33 15 0.22 0 34 6.99 Yes 21 0.2 No 0 0 No -33 0.57 No 37 61.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 158589839 + NM_207118 GTF2H5 1 0.3 0.26 17 -8.17 58.79 36 7.31 Yes 23 0.93 Yes 0 0 No -36 0.73 Yes 34 82.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158593388 + NM_207118 GTF2H5 1 0.43 0.74 38 6.33 87.81 26 5.1 No 38 1.04 Yes 0 0 No -25 0.8 Yes 45 77.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158608071 + NM_207118 GTF2H5 1 0.59 1 41 9.73 92.53 28 4.62 No 75 0.6 No 0 0 No -25 0.66 No 45 61.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 74119908 + NM_032999 GTF2I 1 0.03 0.18 8 4.71 83.86 28 6.29 Yes 15 2.14 Yes 0 0 No -27 0.91 Yes 43 91.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 74129179 + NM_032999 GTF2I 1 22.65 4.54 72 5.03 75.68 28 5.73 Yes 72 1.09 Yes 0 0 No -27 0.45 No 43 50.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 74129442 + NM_032999 GTF2I 1 1.65 0.54 23 5.08 74.77 24 5.29 No 53 -2.62 No 0 0 No -30 0.78 Yes 40 70.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 74133179 + NM_032999 GTF2I 1 1.73 2.68 64 4.62 69.27 17 6.35 Yes 4 0.37 No 25 0.85 Yes -20 0.74 Yes 50 70.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 74133221 + NM_032999 GTF2I 1 0.21 0.31 18 6.51 82.72 16 5.64 Yes 3 0.62 No 0 0 No -27 0.56 No 21 51.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 74149807 + NM_032999 GTF2I 1 0.06 0.17 10 -2 0 41 4.98 No 9 0.32 No 0 0 No -35 0.51 No 35 45.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 74155978 + NM_032999 GTF2I 1 0.67 0.14 9 6.04 80.38 46 7.21 Yes 33 1.56 Yes 0 0 No -27 0.54 No 25 57.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 74158477 + NM_032999 GTF2I 1 0.44 0.31 18 6.35 83.7 15 5.27 No 26 0.76 No 25 0.84 Yes -25 0.74 Yes 45 74.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 224170703 - NR_132119 GTF2IP20 1 3.23 0.26 16 4.93 85.02 17 5.39 No 4 1.2 Yes 0 0 No -25 0.62 No 45 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 66324773 + NR_135738 GTF2IP23 1 15.48 0.97 40 10 92.43 15 4.32 No 31 0.64 No 0 0 No -21 0.28 No 43 59.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 66330424 + NR_135738 GTF2IP23 1 5.27 0.15 9 3.2 64.71 63 8.31 Yes 50 1.05 Yes 0 0 No -34 0.47 No 36 74.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 66342918 + NR_135738 GTF2IP23 1 54.43 2.28 62 3.46 63.54 30 3.87 No 42 0.72 No 0 0 No -22 0.45 No 41 53.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 66343728 + NR_135738 GTF2IP23 1 2.97 0.15 9 10.78 95.65 28 6.34 Yes 53 0.87 Yes 0 0 No -27 0.48 No 42 62.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 66349244 + NR_135738 GTF2IP23 1 3.22 0.21 15 -4.86 0 46 6.73 Yes 22 0.63 No 0 0 No -38 0.62 No 32 78.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 28000390 + NM_002097 GTF3A 1 0.4 1.31 46 6.64 89.8 17 5.2 No 4 0.33 No 0 0 No -27 0.38 No 44 41.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28001230 + NM_002097 GTF3A 1 0.08 0.25 13 -2.51 80.26 29 6.24 Yes 16 1.11 Yes 0 0 No -28 0.77 Yes 42 78.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28002335 + NM_002097 GTF3A 1 0.02 0.1 7 0.23 0 33 5.99 Yes 20 1.58 Yes 0 0 No -32 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 28002342 + NM_002097 GTF3A 1 0.06 0.33 19 -6.65 79.21 40 6.44 Yes 27 1.53 Yes 0 0 No -39 0.51 No 31 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 28002344 + NM_002097 GTF3A 1 0.03 0.18 11 2.05 77.58 42 6.56 Yes 29 1.53 Yes 0 0 No -41 0.58 No 29 92.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 28003308 + NM_002097 GTF3A 1 0.47 2.39 58 10.1 77 34 9.27 Yes 21 0.55 No 20 0.73 Yes -33 0.95 Yes 37 95.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 28004674 + NM_002097 GTF3A 1 0.66 2.9 68 0.67 0 28 5.57 Yes 42 0.48 No 22 0.98 Yes -27 0.87 Yes 43 93.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 28006680 + NM_002097 GTF3A 1 0.19 1.29 47 9.13 89.4 23 5.49 No 10 1.19 Yes 0 0 No -22 0.78 Yes 48 81.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28006869 + NM_002097 GTF3A 1 0.02 0.14 10 -22.73 0 27 7.32 Yes 14 1.41 Yes 0 0 No -26 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 28008251 + NM_002097 GTF3A 1 0.04 0.22 9 1.57 0 15 3.92 No 37 0.63 No 31 0.74 Yes -20 0.87 Yes 50 92.21 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 28008943 + NM_002097 GTF3A 1 0.03 0.19 11 0.31 75.85 78 8.5 Yes 75 1.03 Yes 0 0 No -26 0.54 No 44 37.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 28009274 + NM_002097 GTF3A 1 0.04 0.25 12 -3.01 0 25 6.03 Yes 12 1.29 Yes 0 0 No -31 0.49 No 32 48.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 27480890 - NM_001520 GTF3C1 1 0.82 1.01 40 -0.33 0 11 3.61 No 65 -2.47 No 24 0.74 Yes -29 0.71 Yes 41 40.46 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 27504676 - NM_001520 GTF3C1 1 0.28 0.28 15 -1.18 0 15 4.58 No 31 -2.01 No 0 0 No -21 0.73 Yes 49 51.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 27544446 - NM_001520 GTF3C1 1 0.19 0.21 13 2.57 0 47 7.28 Yes 43 0.77 Yes 0 0 No -44 0.41 No 40 59.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 27549086 - NM_001318909 GTF3C2 1 0.79 0.85 39 8.47 84.14 16 6.5 Yes 3 1.11 Yes 26 0.71 Yes -26 0.56 No 44 57.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 27549542 - NM_001318909 GTF3C2 1 1.68 1.76 59 5.72 71.19 31 5.8 Yes 69 -0.93 No 0 0 No -30 0.62 No 44 59.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27549591 - NM_001318909 GTF3C2 1 1.89 2.03 57 6.72 75.73 33 5.01 No 37 -1.65 No 26 0.62 Yes -32 0.83 Yes 38 80.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27551462 - NM_001318909 GTF3C2 1 0.13 0.21 14 0.89 79.19 28 4.98 No 11 0.35 No 0 0 No -30 0.36 No 40 51.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27553326 - NM_001318909 GTF3C2 1 0.16 0.24 15 6.28 88.13 37 6.16 Yes 60 1.29 Yes 0 0 No -32 0.51 No 38 51.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 197634759 - NM_012086 GTF3C3 1 0.15 0.29 17 1.66 0 27 6.41 Yes 14 1.83 Yes 0 0 No -26 0.93 Yes 44 93.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 197638451 - NM_012086 GTF3C3 1 0.21 0.19 12 10.52 79.76 32 6.51 Yes 19 1.39 Yes 31 0.87 Yes -31 0.8 Yes 39 90.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 197638865 - NM_012086 GTF3C3 1 0.37 0.36 23 4.65 80.04 32 6.39 Yes 19 0.48 No 0 0 No -32 0.6 No 38 74.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 197639972 - NM_012086 GTF3C3 1 0.23 0.36 20 -2.05 0 26 5.69 Yes 13 0.71 No 0 0 No -25 0.63 No 45 44.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 197641244 - NM_012086 GTF3C3 1 0.27 0.32 20 6.96 88.79 17 5.57 Yes 38 0.53 No 0 0 No -25 0.84 Yes 45 73.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 197641343 - NM_012086 GTF3C3 1 0.08 0.1 7 -0.44 0 19 4.4 No 30 0.51 No 18 0.66 Yes -42 0.86 Yes 28 83.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 197654762 - NM_012086 GTF3C3 1 0.08 0.15 11 5.3 79.08 22 4.91 No 55 0.68 No 0 0 No -21 0.93 Yes 49 96.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 197656182 - NM_012086 GTF3C3 1 0.19 0.26 14 -11.02 67.84 27 5.42 No 14 0.86 Yes 0 0 No -26 0.4 No 39 67.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 197661555 - NM_012086 GTF3C3 1 2.19 2.42 64 7.75 92.48 19 4.31 No 54 -3.21 No 0 0 No -22 0.32 No 52 42.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 197662624 - NM_012086 GTF3C3 1 0.09 0.1 7 -6.55 0 14 4 No 42 0.51 No 0 0 No -27 0.32 No 39 43.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135926174 + NM_001122823 GTF3C5 1 0.13 0.17 11 -1.8 0 27 8.37 Yes 14 1.78 Yes 0 0 No -26 0.96 Yes 44 96.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 111280380 + NM_138408 GTF3C6 1 0.07 0.19 12 -3.91 0 12 3.87 No 14 1.92 Yes 0 0 No -26 0.81 Yes 44 65.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 111283603 + NM_138408 GTF3C6 1 0.03 0.24 15 -1.96 0 12 4.24 No 19 1.04 Yes 0 0 No -35 0.55 No 35 49.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 111283828 + NM_138408 GTF3C6 1 0.16 0.99 39 8.9 94.82 27 5.38 No 47 0.79 Yes 0 0 No -29 0.29 No 47 50.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 111287241 + NM_138408 GTF3C6 1 0.06 0.4 21 6.91 86.42 39 5.14 No 47 0.64 No 0 0 No -34 0.8 Yes 36 81.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 111288738 + NM_138408 GTF3C6 1 0.03 0.17 10 -2.2 62.32 29 5.3 No 66 1.46 Yes 0 0 No -28 0.11 No 21 10.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39106104 + NM_004286 GTPBP1 1 0.49 0.42 21 11.68 93.8 32 5.74 Yes 59 -1.71 No 0 0 No -26 0.85 Yes 45 80.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39108658 + NM_004286 GTPBP1 1 0.43 0.36 22 8.89 82.14 23 6.56 Yes 37 0.36 No 0 0 No -36 0.85 Yes 34 93.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39111965 + NM_004286 GTPBP1 1 0.23 0.18 12 0.76 78.83 25 5 No 64 1.21 Yes 0 0 No -24 0.88 Yes 46 90.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39112632 + NM_004286 GTPBP1 1 0.8 1.03 47 4.71 71.62 13 5.89 Yes 12 1.19 Yes 30 0.93 Yes -24 0.65 No 50 70.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 39112661 + NM_004286 GTPBP1 1 0.4 0.51 28 -3.59 0 36 6.16 Yes 41 1.16 Yes 0 0 No -35 0.93 Yes 35 73.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39112800 + NM_004286 GTPBP1 1 0.21 0.26 16 1.12 68.02 26 7.2 Yes 13 -2.04 No 0 0 No -28 0.35 No 40 20.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 39112830 + NM_004286 GTPBP1 1 0.5 0.68 28 4.65 74.28 23 4.78 No 43 -3.95 No 0 0 No -23 0.71 Yes 47 59.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 39113273 + NM_004286 GTPBP1 1 0.43 0.69 35 9.47 93.71 24 5.38 No 70 0.93 Yes 0 0 No -23 0.59 No 47 74.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 39120162 + NM_004286 GTPBP1 1 0.11 0.24 13 10.87 97.39 23 6 Yes 10 0.98 Yes 0 0 No -22 0.78 Yes 48 71.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39122245 + NM_004286 GTPBP1 1 0.18 0.29 16 -3.66 0 41 6.86 Yes 28 -3.41 No 27 0.85 Yes -10 0.83 Yes 60 54.69 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 39122576 + NM_004286 GTPBP1 1 0.47 0.71 32 7.74 91.07 20 6.08 Yes 48 1.91 Yes 0 0 No -31 0.77 Yes 51 58.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 89983332 + NM_033107 GTPBP10 1 0.29 0.26 13 8.16 87.15 27 6.15 Yes 14 0.93 Yes 0 0 No -26 0.91 Yes 44 96.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 89984402 + NM_033107 GTPBP10 1 0.36 0.39 20 -11.5 77.28 28 5.83 Yes 27 0.9 Yes 0 0 No -28 0.79 Yes 42 84.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 89984486 + NM_033107 GTPBP10 1 0.61 0.64 33 1.47 74.75 23 6.27 Yes 10 0.28 No 0 0 No -22 0.78 Yes 48 90.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 89987199 + NM_033107 GTPBP10 1 0.26 0.18 11 5.96 83.99 34 5.35 No 48 -2.8 No 0 0 No -21 0.47 No 49 48.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 90001663 + NM_033107 GTPBP10 1 0.5 0.6 25 3.64 74.95 20 4.87 No 54 1.23 Yes 0 0 No -19 0.73 Yes 50 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43591350 - NM_019096 GTPBP2 1 0.61 0.22 15 4.25 85.45 21 4.87 No 61 -3.15 No 21 0.79 Yes -21 0.72 Yes 49 51.75 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 43591779 - NM_019096 GTPBP2 1 1.58 1.04 40 4.61 79.85 24 6 Yes 11 0.95 Yes 0 0 No -29 0.77 Yes 41 88.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43592396 - NM_019096 GTPBP2 1 0.21 0.11 7 -4.16 0 31 5.92 Yes 18 1.03 Yes 0 0 No -30 0.9 Yes 40 75.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43592400 - NM_019096 GTPBP2 1 1.36 0.68 37 4.15 75.24 27 5.57 Yes 14 1.03 Yes 0 0 No -26 0.91 Yes 44 78.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43592471 - NM_019096 GTPBP2 1 0.31 0.13 9 -3.74 75.19 35 9.13 Yes 22 1.87 Yes 38 0.84 Yes -34 0.96 Yes 36 89.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 43592718 - NM_019096 GTPBP2 1 0.26 0.1 7 5.93 78.8 23 5.8 Yes 10 0.18 No 0 0 No -19 0.41 No 45 52.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43592769 - NM_019096 GTPBP2 1 0.36 0.14 9 -4.6 68.63 26 3.55 No -1 0.48 No 0 0 No -53 0.49 No 59 29.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43592772 - NM_019096 GTPBP2 1 0.43 0.17 7 -1.1 66.28 23 3.33 No -4 0.69 No 0 0 No -50 0.5 No 48 39.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43592786 - NM_019096 GTPBP2 1 0.67 0.22 13 -0.57 70.73 9 4.77 No 72 -6.61 No 0 0 No -36 0.87 Yes 34 56.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 43594124 - NM_019096 GTPBP2 1 0.31 0.14 7 0.41 74.23 27 3.42 No 44 1.17 Yes 26 0.83 Yes -26 0.59 No 44 46.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 43596327 - NM_019096 GTPBP2 1 3.11 0.64 31 8.83 86.57 31 6.4 Yes 18 1.74 Yes 0 0 No -30 0.82 Yes 40 89.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17448682 + NM_133644 GTPBP3 1 0.64 0.15 11 6.5 85.92 25 5.67 Yes 12 1.43 Yes 24 0.94 Yes -24 0.87 Yes 46 90.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17448707 + NM_133644 GTPBP3 1 2.54 0.76 38 4.55 79.3 28 5.18 No 37 1.43 Yes 27 0.67 Yes -27 0.52 No 48 49.27 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 17449351 + NM_133644 GTPBP3 1 0.67 0.17 11 -0.11 0 25 5.57 Yes 59 0.03 No 0 0 No -24 0.86 Yes 46 71.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17449931 + NM_133644 GTPBP3 1 0.35 0.13 8 11.38 83.22 36 7.22 Yes 23 2.07 Yes 35 0.89 Yes -35 0.97 Yes 35 96.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17451915 + NM_133644 GTPBP3 1 22.38 5.49 71 9.65 83.59 20 7.85 Yes 7 2.29 Yes 19 0.9 Yes -19 0.66 Yes 51 81.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 1035107 + NM_012341 GTPBP4 1 0.13 0.35 19 9.41 93.31 30 5.48 No 52 0.33 No 0 0 No -29 0.57 No 45 49.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 1039237 + NM_012341 GTPBP4 1 0.03 0.11 7 2.71 84.79 21 4.93 No 2 1.51 Yes 0 0 No -20 0.81 Yes 50 61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 1044886 + NM_012341 GTPBP4 1 0.05 0.19 11 1.59 67.83 21 4.21 No 42 0.06 No 0 0 No -20 0.42 No 50 33.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 1051758 + NM_012341 GTPBP4 1 0.04 0.13 7 -11.75 0 34 7.37 Yes 21 1.1 Yes 28 0.25 Yes -29 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 46695406 + NM_016426 GTSE1 1 2.72 1.65 54 5.31 82.85 32 9.85 Yes 19 1.23 Yes 0 0 No -31 0.92 Yes 39 91.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 46712407 + NM_016426 GTSE1 1 0.42 0.42 22 3.31 68.06 23 4.79 No 1 1.06 Yes 0 0 No -22 0.9 Yes 48 78.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 46712423 + NM_016426 GTSE1 1 0.37 0.36 23 8 84.92 19 5 No 17 1.25 Yes 0 0 No -29 0.76 Yes 41 46.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 46725267 + NM_016426 GTSE1 1 0.33 0.28 15 6.5 80.81 16 4.69 No 20 1.41 Yes 0 0 No -33 0.63 No 37 51.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 156701608 + NM_001291953 GUCY1B3 1 1.37 1.39 39 10.43 88.41 22 6.19 Yes 9 2.19 Yes 0 0 No -21 0.53 No 49 82.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 156710712 + NM_001291953 GUCY1B3 1 0.39 0.43 23 9.04 88.03 34 5.14 No 63 1.04 Yes 0 0 No -33 0.74 Yes 37 62.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 44682675 + NM_021927 GUF1 1 0.29 0.29 18 8.31 83.21 23 5.73 Yes 10 0.91 Yes 21 0.64 Yes -29 0.44 No 43 39.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 44685255 + NM_021927 GUF1 1 2.1 1.51 57 2.28 0 25 8.74 Yes 49 0.54 No 0 0 No -29 0.8 Yes 41 89.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 44691284 + NM_021927 GUF1 1 0.1 0.11 7 0.96 58.49 17 4.71 No 73 -6.79 No 24 0.76 Yes -16 0.46 No 54 46.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 44694767 + NM_021927 GUF1 1 0.46 0.43 23 5.31 80.83 28 5.83 Yes 45 0.66 No 0 0 No -27 0.91 Yes 43 82.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 44697612 + NM_021927 GUF1 1 0.11 0.13 7 0.81 62.99 20 4.66 No 58 -2.4 No 25 0.74 Yes -19 0.88 Yes 51 64.79 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 44697633 + NM_021927 GUF1 1 0.23 0.25 13 -2.23 78.91 27 5.48 No 73 -2.18 No 0 0 No -27 0.26 No 45 36.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 228333587 + NM_001159391 GUK1 1 0.08 0.22 15 3.34 81.78 24 5 No 32 0.57 No 0 0 No -34 0.55 No 36 29.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 228333713 + NM_001159391 GUK1 1 0.69 2.01 56 1.88 70.91 23 5.07 No 60 -4.24 No 22 0.78 Yes -22 0.4 No 51 46.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 228334561 + NM_001159391 GUK1 1 2.66 9.22 72 5.08 84.56 17 5.29 No 4 -0.22 No 25 0.5 Yes -25 0.81 Yes 57 49.97 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 228335110 + NM_001159391 GUK1 1 0.79 2.51 63 0.82 0 24 7 Yes 11 1.98 Yes 19 0.93 Yes -23 0.76 Yes 47 89.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 228335318 + NM_001159391 GUK1 1 0.03 0.15 10 -9.61 72.02 23 6.08 Yes 10 1.49 Yes 19 0.79 Yes -22 0.93 Yes 48 90.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 228335321 + NM_001159391 GUK1 1 0.85 4.57 70 -2.24 0 9 3.87 No 13 1.48 Yes 19 0.79 Yes -25 0.93 Yes 45 90.38 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 228336058 + NM_001159391 GUK1 1 0.1 0.44 21 8.31 81.67 19 8.77 Yes 6 1.22 Yes 20 0.96 Yes -18 0.8 Yes 52 89.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 65431764 - NM_000181 GUSB 1 0.46 0.36 19 12.93 98.6 29 5.92 Yes 72 0.89 Yes 0 0 No -28 0.81 Yes 42 84.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65432863 - NM_000181 GUSB 1 0.31 0.22 10 6.34 77.57 15 6.4 Yes 46 1.3 Yes 0 0 No -34 0.48 No 51 50.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 65438735 - NM_000181 GUSB 1 0.2 0.17 8 3.55 81.56 36 6.85 Yes 23 1.32 Yes 0 0 No -35 0.89 Yes 35 96.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65439389 - NM_000181 GUSB 1 2.3 1.4 53 5.42 78.98 31 4.93 No 58 2.03 Yes 30 0.72 Yes -30 0.88 Yes 40 89.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 65439425 - NM_000181 GUSB 1 0.21 0.11 7 -0.46 0 35 7.48 Yes 22 2.06 Yes 30 0.72 Yes -34 0.83 Yes 36 76.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 65440166 - NM_000181 GUSB 1 0.46 0.22 14 8.68 93.25 23 6.24 Yes 10 1.02 Yes 0 0 No -22 0.95 Yes 48 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65444465 - NM_000181 GUSB 1 0.13 0.11 7 1.44 69.71 27 6.93 Yes 14 0.96 Yes 0 0 No -26 0.75 Yes 44 77.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65445393 - NM_000181 GUSB 1 0.4 0.24 13 1.78 0 27 5.74 Yes 14 1.12 Yes 0 0 No -26 0.86 Yes 44 90.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 21492585 + NR_027028 GUSBP1 1 0.39 0.19 11 6.9 80.61 26 7 Yes 30 -0.12 No 0 0 No -25 0.97 Yes 45 96.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 24021030 - NR_024448 GUSBP11 1 2.02 0.17 11 10.07 88.27 23 5.83 Yes 10 1.29 Yes 22 0.81 Yes -22 0.79 Yes 48 86.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 24024911 - NR_024448 GUSBP11 1 1.46 0.14 10 5.65 80.49 38 7.24 Yes 72 -3.74 No 0 0 No -37 0.49 No 33 45.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 24043019 - NR_024448 GUSBP11 1 20.24 1.21 48 5.01 87.85 18 4.79 No 18 1.98 Yes 0 0 No -54 0.82 Yes 44 67.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 24056482 - NR_024448 GUSBP11 1 0.9 0.21 14 4.88 88.27 11 4.18 No -2 1.07 Yes 23 0.57 Yes -23 0.52 No 47 39.15 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 24056889 - NR_024448 GUSBP11 1 0.54 0.14 7 7.07 85.72 38 7.75 Yes 25 2.64 Yes 37 0.91 Yes -37 0.75 Yes 33 83.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 24057378 - NR_024448 GUSBP11 1 2.43 0.25 14 2.6 0 27 5.29 No 14 1.12 Yes 26 0.73 Yes -26 0.85 Yes 44 89.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 26850301 - NR_003504 GUSBP2 1 1.92 0.18 11 10.26 87.44 29 5.72 Yes 16 0.9 Yes 0 0 No -28 0.76 Yes 42 84.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 42491375 - NM_173601 GXYLT1 1 0.3 0.32 19 2.16 69.64 19 6.28 Yes 55 0.44 No 0 0 No -42 0.49 No 22 54.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 42491413 - NM_173601 GXYLT1 1 0.11 0.1 7 -2.68 0 30 7.14 Yes 17 0.44 No 0 0 No -29 0.95 Yes 41 96.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 42522031 - NM_173601 GXYLT1 1 6.35 1.31 52 7.56 87.95 55 7.86 Yes 58 1.21 Yes 0 0 No -32 0.33 No 38 28.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 148711933 + NM_004130 GYG1 1 0.21 0.19 11 0.99 0 35 5.92 Yes 22 0.99 Yes 0 0 No -35 0.81 Yes 35 88.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 148714560 + NM_004130 GYG1 1 0.15 0.15 9 4.49 84.91 17 5.82 Yes 44 1.58 Yes 0 0 No -27 0.57 No 43 65.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 148717896 + NM_004130 GYG1 1 0.08 0.13 8 5.11 82.77 23 4.54 No 10 1.38 Yes 0 0 No -22 0.93 Yes 48 86.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 148721739 + NM_004130 GYG1 1 0.2 0.32 19 9.47 87.15 20 6.08 Yes 7 1.08 Yes 20 0.62 Yes -20 0.65 No 50 76.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 49472801 - NR_027763 GYS1 1 0.36 0.35 18 1.41 72.81 49 6.19 Yes 0 -0.4 No 0 0 No -30 0.64 No 40 49.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49473894 - NR_027763 GYS1 1 0.09 0.11 7 10.54 87.1 18 5.39 No 5 1.67 Yes 0 0 No -17 0.65 No 53 73.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 23350199 + NM_001317019 GZF1 1 1.89 0.63 30 -3.73 65.04 18 4.78 No 42 0.67 No 26 0.75 Yes -54 0.67 Yes 16 32.81 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 23350727 + NM_001317019 GZF1 1 43.74 1.94 59 8.07 81.54 27 6.08 Yes 14 1.83 Yes 26 0.88 Yes -26 0.82 Yes 44 90.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 23350727 + NM_001317019 GZF1 1 708.14 30.15 72 8.07 81.54 27 6.08 Yes 14 1.83 Yes 26 0.88 Yes -26 0.82 Yes 44 90.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44875189 - NM_201436 H2AFV 1 0.15 1.03 39 8.97 78.86 28 5.47 No 75 0.93 Yes 0 0 No -27 0.53 No 43 55.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 44875296 - NM_201436 H2AFV 1 0.07 0.4 23 5.97 73.48 22 4.96 No 13 1.03 Yes 18 0.73 Yes -25 0.84 Yes 45 90.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44882954 - NM_201436 H2AFV 1 1189.11 234.35 72 7.35 91.36 29 5.15 No 26 0.27 No 28 0.7 Yes -28 0.85 Yes 42 87.97 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 134679110 - NM_004893 H2AFY 1 0.05 0.17 8 -0.2 0 21 4.89 No 33 1.47 Yes 0 0 No -45 0.96 Yes 25 93.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 134686604 - NM_004893 H2AFY 1 0.22 1.21 46 5.06 79.8 26 6.07 Yes 13 0.29 No 25 0.74 Yes -25 0.47 No 49 58.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 134686604 - NM_004893 H2AFY 1 4.49 24.93 72 5.06 79.8 26 6.07 Yes 13 0.29 No 25 0.74 Yes -25 0.47 No 49 58.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 134695319 - NM_004893 H2AFY 1 0.47 2 55 4.92 86.61 26 7.21 Yes 13 1.76 Yes 25 0.93 Yes -25 0.91 Yes 45 85.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 134695633 - NM_004893 H2AFY 1 1.09 4.67 70 3.66 78.64 40 7.14 Yes 27 1.26 Yes 22 0.92 Yes -22 0.72 Yes 48 77.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 134696289 - NM_004893 H2AFY 1 0.13 0.33 21 -13.27 0 12 3.87 No 16 2.17 Yes 0 0 No -28 0.78 Yes 42 57.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 134696292 - NM_004893 H2AFY 1 0.37 1.03 47 -12.23 0 9 3.87 No 13 2.18 Yes 0 0 No -25 0.75 Yes 45 64.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 134696298 - NM_004893 H2AFY 1 68.15 185.24 72 2.32 69.71 20 7.61 Yes 7 2.2 Yes 19 0.8 Yes -19 0.74 Yes 51 68.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 134696298 - NM_004893 H2AFY 1 0.05 0.14 7 2.32 69.71 20 7.61 Yes 7 2.2 Yes 19 0.8 Yes -19 0.74 Yes 51 68.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 100869705 - NM_002106 H2AFZ 1 0.03 0.61 28 0.83 59.57 58 7.07 Yes 11 0.53 No 30 0.78 Yes -33 0.5 No 37 33.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 100870506 - NM_002106 H2AFZ 1 0.04 0.92 45 4.61 66.57 41 4.79 No 66 0.69 No 0 0 No -19 0.85 Yes 51 87.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 100870922 - NM_002106 H2AFZ 1 0.01 0.13 8 -0.04 0 27 9.85 Yes 14 1.46 Yes 43 0.24 Yes -26 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 226252034 + NM_002107 H3F3A 1 0.03 0.13 8 -9.87 0 31 7.13 Yes 18 0.76 No 0 0 No -30 0.71 Yes 40 85.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226253435 + NM_002107 H3F3A 1 0.04 0.24 16 7.1 85.69 30 4.97 No 17 1.39 Yes 0 0 No -29 0.5 No 49 48.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 226256265 + NM_002107 H3F3A 1 0.26 0.74 33 7.25 92.52 30 5.74 Yes 66 0.61 No 0 0 No -19 0.61 No 51 74.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 226259054 + NM_002107 H3F3A 1 0.08 0.24 15 -11.46 80.72 28 6.09 Yes 15 1.1 Yes 0 0 No -34 0.55 No 42 58.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73774802 - NM_005324 H3F3B 1 0.01 0.14 9 -7.6 67.32 29 5.74 Yes 16 0.25 No 0 0 No -28 0.9 Yes 42 81.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73774826 - NM_005324 H3F3B 1 0.01 0.11 7 -2.08 0 15 4.58 No 50 -1.81 No 25 0.93 Yes -18 0.67 Yes 56 18.51 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 9322085 + NM_001282587 H6PD 1 0.84 0.31 20 9.65 78.15 21 5.83 Yes 8 1.6 Yes 34 0.46 Yes -20 0.9 Yes 50 91.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 9327434 + NM_001282587 H6PD 1 1.02 0.42 20 10.41 89.59 21 6.78 Yes 44 2 Yes 0 0 No -20 0.74 Yes 50 87.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 43016307 - NM_012205 HAAO 1 3.65 3.4 64 11.05 88.85 24 5 No 39 0.47 No 23 0.66 Yes -21 0.4 No 49 47.55 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 43018177 - NM_012205 HAAO 1 0.17 0.18 11 6.38 85.96 19 5.24 No 75 0.86 Yes 0 0 No -18 0.56 No 52 70.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 99229225 + NM_014282 HABP4 1 1.62 0.57 30 3.97 84.41 25 5.57 Yes 12 0.49 No 0 0 No -25 0.63 No 46 59.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 123218488 - NM_001329787 HACD2 1 1.22 1.69 52 7.68 81.35 34 5.91 Yes 37 1.19 Yes 24 0.38 Yes -19 0.37 No 51 53.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 123218519 - NM_001329787 HACD2 1 0.17 0.24 14 6.3 81.41 25 6.01 Yes 6 1.18 Yes 24 0.38 Yes -25 0.58 No 45 70.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 123221523 - NM_001329787 HACD2 1 0.17 0.15 10 1.31 0 9 3.87 No 39 2.18 Yes 0 0 No -51 0.69 Yes 19 87.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 123232571 - NM_001329787 HACD2 1 1.1 0.83 34 9.04 92.45 23 5.74 Yes 10 0.76 No 0 0 No -22 0.78 Yes 48 88.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 123269098 - NM_001329787 HACD2 1 0.18 0.11 7 11.23 90.77 28 6.89 Yes 65 1.29 Yes 0 0 No -27 0.73 Yes 43 60.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 123269935 - NM_001329787 HACD2 1 1.73 1.44 54 7.79 86.84 29 3.89 No 4 0.77 Yes 0 0 No -25 0.36 No 48 49.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 123276316 - NM_001329787 HACD2 1 0.32 0.21 8 8.42 88.85 23 5.83 Yes 10 1.12 Yes 0 0 No -22 0.83 Yes 48 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 123298617 - NM_001329787 HACD2 1 0.76 0.67 32 7.82 91.61 25 4.42 No 70 1.23 Yes 0 0 No -21 0.42 No 49 44.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65826686 + NM_016395 HACD3 1 0.11 0.15 8 6.31 83.84 33 5.05 No 40 0.51 No 32 0.66 Yes -32 0.69 Yes 38 81.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 65856605 + NM_016395 HACD3 1 0.12 0.14 10 7.45 86.71 21 7.72 Yes 8 1.16 Yes 0 0 No -20 0.79 Yes 50 88.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21011438 - NM_001010915 HACD4 1 12.11 7.82 72 -0.62 68.68 27 6.09 Yes 73 1 Yes 0 0 No -26 0.79 Yes 44 79.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21011482 - NM_001010915 HACD4 1 0.9 0.63 32 2.78 62.07 42 6.33 Yes 29 1.01 Yes 0 0 No -32 0.45 No 38 42.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21014912 - NM_001010915 HACD4 1 0.33 0.19 13 7.82 86.49 27 6.4 Yes 70 1.12 Yes 0 0 No -26 0.73 Yes 44 78.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21017910 - NM_001010915 HACD4 1 0.62 0.44 17 8.89 86.58 17 4.8 No 70 0.23 No 22 0.62 Yes -22 0.88 Yes 48 82.06 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 21029909 - NM_001010915 HACD4 1 0.66 0.25 13 7.16 91.86 13 6.39 Yes 76 0.83 Yes 0 0 No -27 0.87 Yes 43 93.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 105178286 - NM_001321083 HACE1 1 0.76 0.11 8 0.24 0 16 3.87 No 69 1.01 Yes 0 0 No -22 0.83 Yes 48 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 105210862 - NM_001321083 HACE1 1 0.84 0.14 9 4.74 84.41 30 8.92 Yes 17 1.92 Yes 0 0 No -29 0.61 No 41 77.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 105224973 - NM_001321083 HACE1 1 4.8 0.53 32 5.63 84.35 16 4.69 No 20 0.11 No 32 0.7 Yes -21 0.83 Yes 49 86.36 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 105225197 - NM_001321083 HACE1 1 1.85 0.19 12 0.09 81.03 26 7.19 Yes 13 1.93 Yes 29 0.93 Yes -25 0.88 Yes 45 95.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 105228333 - NM_001321083 HACE1 1 10.07 1.01 39 10.23 87.22 28 6.29 Yes 15 1.37 Yes 27 0.86 Yes -27 0.87 Yes 43 87.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 105271300 - NM_001321083 HACE1 1 2.36 0.24 14 3.01 0 31 6.4 Yes 18 0.83 Yes 0 0 No -31 0.47 No 40 61.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 105272783 - NM_001321083 HACE1 1 11.72 1.25 49 7.67 85.86 28 7.68 Yes 15 1.54 Yes 0 0 No -27 0.95 Yes 43 96.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 105298417 - NM_001321083 HACE1 1 2.79 0.43 21 8.06 88.76 25 4.38 No 73 0.59 No 0 0 No -24 0.94 Yes 46 95.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 15604491 - NM_001284413 HACL1 1 0.56 0.29 16 4.53 83.52 22 5.29 No 75 -4.94 No 0 0 No -21 0.54 No 49 58.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 15616548 - NM_001284413 HACL1 1 0.63 0.29 18 4.02 83.18 26 6.99 Yes 13 1.43 Yes 0 0 No -25 0.68 Yes 45 91.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 108917158 + NM_005327 HADH 1 0.5 0.47 28 7.16 89.56 21 5.78 Yes 8 1.42 Yes 0 0 No -20 0.79 Yes 50 87.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 108925701 + NM_005327 HADH 1 0.15 0.17 11 8.52 83.33 24 5.48 No 11 0.11 No 0 0 No -23 0.92 Yes 47 94.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 108925819 + NM_005327 HADH 1 0.21 0.26 17 6.07 78.3 27 5.82 Yes 14 0.95 Yes 26 0.7 Yes -26 0.61 No 44 66.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 108938612 + NM_005327 HADH 1 0.07 0.17 8 9.12 83.4 31 7.69 Yes 24 0.84 Yes 0 0 No -30 0.69 Yes 34 75.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 108939601 + NM_005327 HADH 1 0.23 0.49 24 6.86 87.56 28 5.61 Yes 15 0.24 No 0 0 No -28 0.37 No 42 46.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 108949094 + NM_005327 HADH 1 0.35 0.81 40 8.96 90.49 32 5.91 Yes 19 1.23 Yes 31 0.83 Yes -31 0.8 Yes 39 85.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 26416638 - NM_000182 HADHA 1 0.03 0.18 11 -2.91 0 31 6.08 Yes 18 0.34 No 0 0 No -30 0.81 Yes 40 81.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 26418183 - NM_000182 HADHA 1 0.24 1.56 56 7.25 80.63 21 4.99 No 70 1.19 Yes 0 0 No -23 0.62 No 47 67.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 26432758 - NM_000182 HADHA 1 0.02 0.11 8 -9.94 0 38 5.58 Yes 8 1.17 Yes 0 0 No -20 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 26433684 - NM_000182 HADHA 1 0.09 0.44 26 10.17 81.85 30 7.02 Yes 43 0.71 No 0 0 No -30 0.83 Yes 40 89.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 26437394 - NM_000182 HADHA 1 0.23 1.15 46 3.23 86.41 33 5.49 No 5 1.01 Yes 0 0 No -32 0.75 Yes 38 59.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 26437429 - NM_000182 HADHA 1 0.05 0.24 10 -23.37 0 22 5.1 No 9 0.59 No 0 0 No -21 0.79 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 26437430 - NM_000182 HADHA 1 0.03 0.13 8 -15.05 0 21 5 No 8 0.6 No 0 0 No -20 0.77 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 26437446 - NM_000182 HADHA 1 0.35 1.67 56 -1.27 61.44 19 3.91 No 60 0.45 No 19 0.89 Yes -39 0.43 No 52 55.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 26461869 - NM_000182 HADHA 1 0.18 0.99 39 2.94 0 25 8.28 Yes 57 0.75 No 0 0 No -31 0.86 Yes 39 91.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 26477280 + NM_001281513 HADHB 1 0.67 1.9 59 6.09 84.38 25 6.24 Yes 12 0.79 Yes 22 0.87 Yes -24 0.86 Yes 46 81.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 26510466 + NM_001281513 HADHB 1 0.43 1.04 43 4.96 80.09 23 4.8 No 10 0.52 No 0 0 No -22 0.83 Yes 48 78.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 26512181 + NM_001281513 HADHB 1 0.25 0.61 27 10.55 83.59 26 6.4 Yes 47 -1.23 No 0 0 No -25 0.63 No 45 78.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 26512203 + NM_001281513 HADHB 1 0.05 0.13 7 5.49 74.62 25 4.42 No 12 0.62 No 0 0 No -24 0.67 Yes 46 77.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 1859448 - NM_001040427 HAGH 1 1.12 0.63 21 7.26 84.78 19 4.52 No 71 -0.89 No 24 0.74 Yes -21 0.5 No 49 82.29 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 1867064 - NM_001040427 HAGH 1 2.25 1.92 12 2.89 70.47 64 8.17 Yes 51 0.83 Yes 0 0 No -26 0.92 Yes 44 92.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 778796 + NM_032304 HAGHL 1 4.99 1.07 42 2.2 80.91 24 5.1 No 11 1.88 Yes 0 0 No -23 0.96 Yes 47 83.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89422700 - NM_001307952 HAPLN3 1 1.82 0.22 14 -9.58 66.72 30 5.53 No 8 0.88 Yes 18 0.53 Yes -33 0.35 No 41 40.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 89423842 - NM_001307952 HAPLN3 1 3.86 0.36 17 13.57 87.87 28 6.39 Yes 22 1.01 Yes 28 0.83 Yes -28 0.46 No 36 54.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 46634123 - NM_173811 HARBI1 1 0.61 0.13 9 6.43 79.53 23 4.89 No -3 0.31 No 0 0 No -22 0.97 Yes 48 97.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 140056728 - NM_002109 HARS 1 0.1 0.29 17 6.91 88.68 23 6.45 Yes 10 1.43 Yes 18 0.95 Yes -22 0.76 Yes 48 84.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 140057842 - NM_002109 HARS 1 0.11 0.25 14 1.91 76.21 25 5.28 No 12 0.56 No 0 0 No -24 0.86 Yes 46 68.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 140058716 - NM_002109 HARS 1 0.3 0.9 40 -4.99 0 34 5.85 Yes 0 1.46 Yes 31 0.3 Yes -13 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 140063253 - NM_002109 HARS 1 0.05 0.1 7 3.07 81.99 17 6.93 Yes 4 1.19 Yes 25 0.65 Yes -25 0.5 No 54 74.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 140067519 - NM_002109 HARS 1 0.34 0.71 34 2.61 0 23 5.83 Yes 10 1.07 Yes 0 0 No -22 0.73 Yes 48 85.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 140067524 - NM_002109 HARS 1 0.08 0.17 9 6.47 85.02 18 5.39 No 5 1.1 Yes 0 0 No -22 0.54 No 53 69.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 140070359 - NM_002109 HARS 1 1.68 3.74 67 9.26 80.05 33 5.35 No 29 2 Yes 0 0 No -32 0.83 Yes 38 89.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 140075613 + NM_001278732 HARS2 1 0.17 0.11 7 8.71 93.22 66 6.33 Yes 14 0.48 No 0 0 No -26 0.43 No 44 62.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 140075680 + NM_001278732 HARS2 1 0.63 0.35 19 -15.41 62.93 28 5.57 Yes -4 1.09 Yes 19 0.69 Yes -27 0.83 Yes 43 51.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 172779431 + NM_003642 HAT1 1 3.93 5.82 70 10.74 92.81 27 5.09 No 8 0.82 Yes 20 0.83 Yes -26 0.85 Yes 44 74.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 172785043 + NM_003642 HAT1 1 0.04 0.17 10 0.39 0 37 6.93 Yes 24 0.59 No 0 0 No -36 0.94 Yes 34 97.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 172813996 + NM_003642 HAT1 1 0.12 0.47 24 10.69 92.83 25 5.92 Yes 54 1.47 Yes 0 0 No -24 0.82 Yes 46 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172821945 + NM_003642 HAT1 1 0.08 0.32 18 3.5 71.7 24 8.37 Yes 11 0.61 No 0 0 No -26 0.37 No 40 35.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 172823367 + NM_003642 HAT1 1 0.04 0.13 7 -0.93 0 39 5.7 Yes 7 0.4 No 0 0 No -30 0.69 Yes 40 75.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 172823392 + NM_003642 HAT1 1 0.41 1.19 49 7.01 76.01 20 5.77 Yes 7 1.33 Yes 0 0 No -19 0.36 No 51 87.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 172832269 + NM_003642 HAT1 1 0.03 0.1 7 11.02 91.57 37 7.2 Yes 15 1.06 Yes 0 0 No -27 0.5 No 43 39.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 43699892 + NR_026978 HAUS1 1 0.08 0.17 10 -12.2 0 20 4.8 No 7 0.81 Yes 0 0 No -19 0.7 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 43699948 + NR_026978 HAUS1 1 0.35 0.75 31 -1.19 54.63 38 5.11 No 13 1.5 Yes 0 0 No -32 0.73 Yes 38 60.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 43704720 + NR_026978 HAUS1 1 0.1 0.19 13 9.91 89.29 31 8.27 Yes 12 1.5 Yes 0 0 No -30 0.52 No 40 78.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 43706611 + NR_026978 HAUS1 1 0.16 0.32 19 1.86 84.41 35 5.84 Yes 22 0.01 No 41 0.32 Yes -31 0.43 No 39 51.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 43706615 + NR_026978 HAUS1 1 0.8 1.39 46 3.36 0 39 6.15 Yes 44 -2.24 No 41 0.32 Yes -35 0.48 No 35 49.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 43708045 + NR_026978 HAUS1 1 0.2 0.36 23 1.02 0 33 7.57 Yes 63 -2.56 No 0 0 No -32 0.73 Yes 38 89.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42853472 + NM_001323631 HAUS2 1 0.56 0.13 9 -0.52 0 36 8.49 Yes 23 1.48 Yes 30 0.94 Yes -35 0.74 Yes 35 87.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 42853472 + NM_001323631 HAUS2 1 7.46 1.47 47 -0.52 0 36 8.49 Yes 23 1.48 Yes 30 0.94 Yes -35 0.74 Yes 35 87.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2240516 - NM_024511 HAUS3 1 0.57 0.38 21 5.26 81.53 31 5.43 No 59 -5.68 No 0 0 No -29 0.33 No 44 44.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 23417243 - NM_001166270 HAUS4 1 1.02 1.13 47 3.69 84.24 20 3.48 No 74 -2.82 No 23 0.55 Yes -23 0.61 No 47 78.01 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 36104570 + NM_015302 HAUS5 1 1.06 0.36 20 6.89 72.14 27 6.08 Yes 14 0.14 No 26 0.64 Yes -26 0.57 No 43 57.86 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 36106609 + NM_015302 HAUS5 1 0.46 0.15 10 4.34 76.1 25 5.28 No 53 -2.45 No 0 0 No -24 0.4 No 47 45.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36108164 + NM_015302 HAUS5 1 0.73 0.49 27 2.69 0 15 4.58 No 54 -3.98 No 26 0.86 Yes -14 0.29 No 56 38.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 36110328 + NM_015302 HAUS5 1 0.73 0.15 9 -8.65 76.59 24 5.48 No 11 0.3 No 0 0 No -23 0.95 Yes 47 91.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36111324 + NM_015302 HAUS5 1 0.63 0.24 15 5.88 81.5 26 5.35 No 13 0.55 No 0 0 No -25 0.9 Yes 45 90.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19056400 - NM_001270890 HAUS6 1 0.15 0.15 10 -5.46 66.88 52 7.59 Yes 26 1.3 Yes 0 0 No -28 0.85 Yes 42 83.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 19061826 - NM_001270890 HAUS6 1 0.18 0.14 8 2.99 0 30 6 Yes 72 -3.9 No 0 0 No -29 0.87 Yes 41 84.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19076191 - NM_001270890 HAUS6 1 0.11 0.11 8 9.47 88.27 27 8.24 Yes 14 1.47 Yes 0 0 No -26 0.94 Yes 44 92.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 19076345 - NM_001270890 HAUS6 1 0.46 0.53 24 3.1 0 31 6.04 Yes 18 0.85 Yes 0 0 No -30 0.8 Yes 40 77.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 19081043 - NM_001270890 HAUS6 1 0.15 0.13 8 6.3 90.92 28 4.15 No 3 0.8 Yes 0 0 No -27 0.47 No 43 48.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 19091295 - NM_001270890 HAUS6 1 1.2 0.97 44 11.53 94.37 44 5.38 No 42 0.91 Yes 0 0 No -36 0.82 Yes 34 87.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 19093840 - NM_001270890 HAUS6 1 0.44 0.24 15 5.36 89.57 27 5.2 No 53 1.46 Yes 0 0 No -26 0.73 Yes 44 53.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 19093860 - NM_001270890 HAUS6 1 0.32 0.17 12 1.44 0 46 5.67 Yes 33 1.45 Yes 0 0 No -45 0.59 No 25 57.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 19096706 - NM_001270890 HAUS6 1 2.21 1.19 47 7.26 82.63 23 6.35 Yes 24 1.37 Yes 0 0 No -27 0.6 No 43 61.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 19100675 - NM_001270890 HAUS6 1 0.18 0.1 7 7.97 76.21 103 10.19 Yes 16 0.96 Yes 0 0 No -28 0.68 Yes 42 72.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 152720512 - NM_017518 HAUS7 1 30.18 11.93 72 -1.62 65.03 34 6.01 Yes 21 0.1 No 0 0 No -33 0.8 Yes 37 79.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 152721107 - NM_017518 HAUS7 1 5.24 2.44 64 2.3 74.98 20 5.57 Yes 7 1.42 Yes 0 0 No -19 0.64 No 51 89.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 152722083 - NM_017518 HAUS7 1 0.42 0.38 19 -6.81 0 11 4.12 No 45 0.32 No 23 0.92 Yes -57 0.66 No 13 49.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 152727526 - NM_017518 HAUS7 1 0.18 0.18 10 5.39 83.07 30 7.01 Yes 17 1.21 Yes 29 0.89 Yes -29 0.47 No 37 58.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 152728560 - NM_017518 HAUS7 1 1.22 0.75 30 8.03 90.2 18 4.9 No 15 -0.65 No 0 0 No -21 0.8 Yes 49 73.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 152730356 - NM_017518 HAUS7 1 0.24 0.18 10 7.57 87.68 15 6.93 Yes 53 1.08 Yes 0 0 No -23 0.68 Yes 47 78.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17161681 - NM_001011699 HAUS8 1 0.79 0.44 26 4.19 87.6 15 4.31 No 2 1.28 Yes 0 0 No -26 0.43 No 20 48.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17169117 - NM_001011699 HAUS8 1 0.42 0.21 14 6 76.81 34 6 Yes 57 -4.05 No 0 0 No -21 0.39 No 36 44.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17169909 - NM_001011699 HAUS8 1 0.88 0.58 30 8.94 87.66 35 5.83 Yes 34 0.98 Yes 0 0 No -30 0.54 No 36 49.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17170903 - NM_001011699 HAUS8 1 810.6 51.06 72 5.45 90.77 27 7.18 Yes 14 1.33 Yes 26 0.92 Yes -26 0.84 Yes 44 92.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17170903 - NM_001011699 HAUS8 1 9.68 0.58 29 5.45 90.77 27 7.18 Yes 14 1.33 Yes 26 0.92 Yes -26 0.84 Yes 44 92.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17171034 - NM_001011699 HAUS8 1 7.86 0.58 26 10.33 86.44 30 5.83 Yes 33 0.09 No 0 0 No -29 0.62 No 41 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 17171034 - NM_001011699 HAUS8 1 1.82 0.15 9 10.33 86.44 30 5.83 Yes 33 0.09 No 0 0 No -29 0.62 No 41 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 154245362 + NM_006118 HAX1 1 0.3 0.74 37 7.41 86.29 59 8.37 Yes 46 1.6 Yes 0 0 No -31 0.58 No 39 66.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154245817 + NM_006118 HAX1 1 0.33 0.82 39 0.71 0 9 3.73 No -4 0.29 No 0 0 No -38 0.59 No 46 49.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154245834 + NM_006118 HAX1 1 0.06 0.17 11 -11.14 83.64 22 4.9 No 13 0.54 No 0 0 No -25 0.62 No 45 57.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154245955 + NM_006118 HAX1 1 8.28 20.22 72 4.29 77 23 5.39 No 22 0.76 No 22 0.85 Yes -22 0.89 Yes 48 86.84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154246225 + NM_006118 HAX1 1 0.82 3.03 67 5 84.97 19 3.94 No 16 0.15 No 28 0.67 Yes -28 0.56 No 42 73.83 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 154246258 + NM_006118 HAX1 1 0.11 0.4 23 1.83 0 13 4.15 No 49 0.15 No 0 0 No -32 0.61 No 38 47.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154247426 + NM_006118 HAX1 1 0.05 0.18 10 -13.28 0 21 6.11 Yes 8 0.47 No 0 0 No -20 0.68 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 154247553 + NM_006118 HAX1 1 0.3 1.08 48 8.25 72.29 29 5.83 Yes 16 1.07 Yes 28 0.87 Yes -28 0.83 Yes 42 77.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154247872 + NM_006118 HAX1 1 0.05 0.21 13 -1.57 0 39 7 Yes 54 -2.8 No 0 0 No -38 0.79 Yes 32 87.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 106836734 + NM_012257 HBP1 1 0.24 0.13 7 3.19 83.14 22 5.82 Yes 9 1.35 Yes 27 0.87 Yes -27 0.66 Yes 43 64.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 135311111 - NM_006620 HBS1L 1 0.16 0.29 15 7.93 86.48 20 6.68 Yes 7 0.01 No 0 0 No -24 0.71 Yes 46 67.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 135313719 - NM_006620 HBS1L 1 0.16 0.26 16 -3.79 47.93 44 7.25 Yes 42 0.55 No 0 0 No -43 0.81 Yes 27 77.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 135323969 - NM_006620 HBS1L 1 0.27 0.56 31 -7.48 0 18 4.57 No 31 0.84 Yes 0 0 No -43 0.82 Yes 27 67.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 135323972 - NM_006620 HBS1L 1 0.2 0.44 20 -9.65 0 15 4.23 No 28 0.83 Yes 0 0 No -40 0.83 Yes 30 60.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 135331898 - NM_006620 HBS1L 1 1.17 2.49 66 11.06 91.41 37 3.98 No 12 0.59 No 0 0 No -31 0.58 No 46 62.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 135357933 - NM_006620 HBS1L 1 0.41 0.85 35 5.02 75.31 37 6.32 Yes 24 1.41 Yes 36 0.7 Yes -36 0.75 Yes 34 73.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 135359165 - NM_006620 HBS1L 1 15.31 32.07 72 -5.61 0 99 8.92 Yes 47 1.4 Yes 26 0.82 Yes -31 0.72 Yes 39 61.33 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 135359170 - NM_006620 HBS1L 1 0.76 1.57 47 2.78 71.54 94 8.72 Yes 42 1.41 Yes 26 0.82 Yes -26 0.8 Yes 44 82.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 135361796 - NM_006620 HBS1L 1 0.12 0.18 10 4.42 80.44 32 5.46 No 74 0.37 No 0 0 No -31 0.53 No 50 63.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153215061 - NM_005334 HCFC1 1 0.08 0.15 8 -5.1 0 10 4 No 19 1.91 Yes 0 0 No -31 0.94 Yes 39 96.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153215993 - NM_005334 HCFC1 1 0.07 0.17 11 -8.07 71.68 27 5.51 No 6 2.24 Yes 0 0 No -26 0.74 Yes 44 70.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153216936 - NM_005334 HCFC1 1 0.17 0.25 15 -1.14 69.82 32 6.78 Yes 19 0.54 No 0 0 No -31 0.84 Yes 39 65.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153217613 - NM_005334 HCFC1 1 10.01 14.74 72 -2.37 72.02 26 5.39 No 13 0.11 No 25 0.91 Yes -25 0.6 No 44 60.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153218539 - NM_005334 HCFC1 1 2.37 3.22 66 4.08 75.97 28 5.66 Yes 15 1.59 Yes 0 0 No -27 0.94 Yes 43 95.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153218542 - NM_005334 HCFC1 1 19.65 28.06 72 9.84 80.98 25 5.39 No 12 1.59 Yes 24 0.98 Yes -24 0.95 Yes 46 95.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153224922 - NM_005334 HCFC1 1 0.46 0.96 37 5.47 74.6 27 5.47 No 33 1.87 Yes 0 0 No -26 0.96 Yes 44 96.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153229751 - NM_005334 HCFC1 1 0.12 0.35 18 3.62 0 17 4 No 69 1.77 Yes 24 0.8 Yes -21 0.63 No 49 83.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 3073414 - NM_001288665 HCFC1R1 1 8.85 3.97 70 8.86 83.83 33 5.69 Yes 6 0.95 Yes 18 0.43 Yes -27 0.33 No 52 49.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 104491388 + NM_013320 HCFC2 1 2.65 1.15 43 4.93 72.68 34 3.91 No 36 -2.45 No 23 0.54 Yes -31 0.54 No 39 55.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 104491425 + NM_013320 HCFC2 1 0.6 0.26 13 -2.55 73.66 25 4.58 No 12 0.54 No 0 0 No -24 0.62 No 46 63.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121350828 - NM_001292041 HCLS1 1 0.17 0.96 39 -6.26 81.73 27 6.82 Yes 23 1.59 Yes 0 0 No -26 0.74 Yes 44 66.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 121366330 - NM_001292041 HCLS1 1 0.01 0.13 7 9.11 83.17 11 5.57 Yes 61 -2.77 No 25 0.37 Yes -45 0.47 No 44 52.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 121372741 - NM_001292041 HCLS1 1 0.09 0.93 46 5.58 74.01 44 7.26 Yes 31 1.14 Yes 0 0 No -30 0.78 Yes 40 83.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121375114 - NM_001292041 HCLS1 1 0.14 1.51 51 7.48 85.89 23 4.9 No 30 1.19 Yes 22 0.92 Yes -22 0.87 Yes 48 80.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 121377262 - NM_001292041 HCLS1 1 0.04 0.22 11 4.87 87.21 16 6.32 Yes 55 0.21 No 0 0 No -26 0.71 Yes 44 63.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 36394551 + NM_014266 HCST 1 6.6 7.74 71 6.23 76.3 38 6.63 Yes 76 -2.44 No 0 0 No -26 0.91 Yes 44 91.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36395024 + NM_014266 HCST 1 38.88 36.06 72 1.31 72.45 28 5.66 Yes 15 0.95 Yes 24 0.92 Yes -27 0.92 Yes 43 91.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32768200 + NM_004964 HDAC1 1 0.06 0.26 17 -2.14 0 16 5.82 Yes 3 0.71 No 24 0.68 Yes -15 0.43 No 55 59.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 32769812 + NM_004964 HDAC1 1 0.07 0.56 27 6.97 82.59 28 5.65 Yes 47 0.18 No 0 0 No -28 0.58 No 42 64.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32775806 + NM_004964 HDAC1 1 0.06 0.5 24 8.17 76.81 30 5.74 Yes 17 1.63 Yes 0 0 No -29 0.95 Yes 41 98.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32792533 + NM_004964 HDAC1 1 0.05 0.29 16 1.2 0 26 5.43 No 66 1.34 Yes 23 0.9 Yes -25 0.77 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 32792543 + NM_004964 HDAC1 1 0.08 0.44 23 -2.17 0 36 6.27 Yes 76 1.33 Yes 0 0 No -35 0.73 Yes 35 74.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32793006 + NM_004964 HDAC1 1 0.13 0.56 31 7.95 82.03 13 6.24 Yes 74 -2.39 No 28 0.6 Yes -28 0.45 No 38 70.34 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 32797113 + NM_004964 HDAC1 1 0.2 1.51 49 3.25 72.85 25 6.78 Yes 53 1.19 Yes 18 0.5 Yes -21 0.43 No 46 54.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 32797246 + NM_004964 HDAC1 1 0.01 0.1 7 6.13 82.02 23 7.36 Yes 10 1.33 Yes 35 0.58 Yes -22 0.78 Yes 48 87.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32797246 + NM_004964 HDAC1 1 0.03 0.22 14 6.13 82.02 23 7.36 Yes 10 1.33 Yes 35 0.58 Yes -22 0.78 Yes 48 87.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32797269 + NM_004964 HDAC1 1 0.01 0.1 7 3.34 0 29 5.48 No 16 1.99 Yes 35 0.58 Yes -28 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 32797280 + NM_004964 HDAC1 1 0.06 0.47 25 -2.48 0 40 6.4 Yes 27 1.95 Yes 0 0 No -39 0.77 Yes 31 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32798261 + NM_004964 HDAC1 1 0.02 0.13 7 4.37 78.13 15 3.44 No 56 -5.04 No 23 0.65 Yes -26 0.49 No 45 59.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 32798304 + NM_004964 HDAC1 1 0.24 1.46 49 0.91 73.6 27 7.06 Yes 63 -2.26 No 0 0 No -35 0.67 Yes 44 70.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50684166 - NM_001159286 HDAC10 1 2.05 0.75 40 8.26 80.97 27 5.07 No 37 0.7 No 0 0 No -31 0.74 Yes 40 81.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50684602 - NM_001159286 HDAC10 1 0.49 0.21 9 9.21 90.54 45 6.78 Yes 32 0.37 No 0 0 No -24 0.55 No 31 72.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 50684803 - NM_001159286 HDAC10 1 0.49 0.15 8 -13.03 65.44 24 4.75 No 73 0.83 Yes 0 0 No -29 0.69 Yes 41 83.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50687946 - NM_001159286 HDAC10 1 1.38 0.72 34 -1.14 0 20 4.22 No 25 -2.46 No 0 0 No -19 0.89 Yes 51 90.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50688929 - NM_001159286 HDAC10 1 1.18 0.31 17 4.57 80.86 22 5.1 No 46 1.99 Yes 0 0 No -58 0.43 No 44 37.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50689021 - NM_001159286 HDAC10 1 0.86 0.25 16 3.79 74.22 32 6 Yes 19 0.4 No 0 0 No -31 0.88 Yes 39 87.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 114260411 - NM_001527 HDAC2 1 0.54 2.71 60 2.52 83.89 20 3.68 No 72 1.28 Yes 0 0 No -23 0.73 Yes 47 71.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 114264680 - NM_001527 HDAC2 1 0.13 0.6 30 -6.43 0 45 6.27 Yes 17 1.45 Yes 26 0.68 Yes -10 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 114265574 - NM_001527 HDAC2 1 0.04 0.18 10 -14.45 0 26 5.27 No 62 0.93 Yes 0 0 No -25 0.86 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 114267253 - NM_001527 HDAC2 1 0.06 0.22 14 -3.38 73 35 5.15 No 12 0.87 Yes 0 0 No -20 0.62 No 50 76.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 114273374 - NM_001527 HDAC2 1 0.2 0.39 24 10.22 90.75 46 7.44 Yes 33 1.28 Yes 0 0 No -36 0.61 No 34 62.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 114277340 - NM_001527 HDAC2 1 0.14 0.79 35 4.78 68.89 35 7.41 Yes 22 1.07 Yes 29 0.86 Yes -34 0.87 Yes 36 92.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 114277857 - NM_001527 HDAC2 1 0.03 0.13 8 -15.63 0 22 6.3 Yes 9 0.38 No 0 0 No -21 0.55 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 114277893 - NM_001527 HDAC2 1 0.05 0.14 10 6.98 86.32 26 5.2 No 72 -1.83 No 26 0.53 Yes -26 0.69 Yes 44 78.1 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 114281204 - NM_001527 HDAC2 1 0.04 0.17 7 7.62 75.88 30 5.66 Yes 17 0.09 No 29 0.89 Yes -29 0.95 Yes 41 97.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 114283559 - NM_001527 HDAC2 1 0.81 2.46 61 8.6 91.7 28 5.24 No 35 1.4 Yes 27 0.69 Yes -27 0.89 Yes 43 91.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 114289861 - NM_001527 HDAC2 1 0.34 1.03 44 4.78 76.04 60 7.28 Yes 12 0.49 No 30 0.77 Yes -20 0.71 Yes 46 53.26 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 141001100 - NM_003883 HDAC3 1 0.06 0.11 7 0.07 0 29 6.53 Yes 16 2.33 Yes 0 0 No -28 0.82 Yes 42 90.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 141007780 - NM_003883 HDAC3 1 1.68 3.15 69 5.71 77.94 52 7.96 Yes 39 1.96 Yes 27 0.58 Yes -51 0.9 Yes 19 93.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 141009499 - NM_003883 HDAC3 1 0.19 0.24 13 -1.49 63.45 13 4.47 No 36 1.11 Yes 21 0.89 Yes -54 0.59 No 16 54.64 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 239988732 - NM_006037 HDAC4 1 4.5 0.18 11 7.56 82.05 19 4.09 No 6 0.85 Yes 0 0 No -26 0.77 Yes 44 50.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 240097235 - NM_006037 HDAC4 1 2.08 0.17 11 7.21 86.35 24 5.48 No 54 1 Yes 0 0 No -23 0.73 Yes 50 77.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 240108629 - NM_006037 HDAC4 1 1.02 0.1 7 5.16 69.56 32 7.08 Yes 19 1.79 Yes 0 0 No -24 0.87 Yes 46 81.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 240108857 - NM_006037 HDAC4 1 1.15 0.13 7 10.84 90.72 31 4.81 No 18 1.92 Yes 26 0.92 Yes -26 0.92 Yes 44 92.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 42156242 - NM_005474 HDAC5 1 0.21 0.17 12 1.75 0 9 3.87 No 19 1.68 Yes 0 0 No -31 0.86 Yes 39 93.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42157589 - NM_005474 HDAC5 1 0.24 0.17 9 0.15 0 28 3.98 No 15 0.52 No 0 0 No -27 0.9 Yes 43 83.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42158221 - NM_005474 HDAC5 1 0.4 0.25 13 -2.15 74.51 35 5.79 Yes 22 -1.35 No 0 0 No -23 0.83 Yes 36 45.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 42160015 - NM_005474 HDAC5 1 0.43 0.35 19 5.31 76.92 29 5.92 Yes 42 2.48 Yes 0 0 No -28 0.71 Yes 42 55.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 42169668 - NM_005474 HDAC5 1 0.58 0.26 12 -10.28 0 10 4 No 54 1.12 Yes 19 0.9 Yes -20 0.36 No 50 61.57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 42170851 - NM_005474 HDAC5 1 1.26 0.57 28 0.89 74.72 34 8.37 Yes 21 1.43 Yes 0 0 No -33 0.96 Yes 37 96.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42182400 - NM_005474 HDAC5 1 0.62 0.28 18 11.53 92.48 29 5.84 Yes 75 1.31 Yes 0 0 No -28 0.91 Yes 42 87.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42182464 - NM_005474 HDAC5 1 2.08 0.9 41 9.91 81.56 24 6.51 Yes 11 1.39 Yes 0 0 No -24 0.77 Yes 46 78.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48661326 + NR_135591 HDAC6 1 0.45 0.28 18 6.24 70.84 37 6 Yes 58 2.34 Yes 24 0.85 Yes -36 0.89 Yes 34 75.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48669409 + NR_135591 HDAC6 1 0.13 0.1 7 7.94 86.73 16 7.59 Yes 3 1.2 Yes 0 0 No -22 0.97 Yes 48 93.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48675766 + NR_135591 HDAC6 1 1.01 0.32 17 9.04 80.32 29 6.56 Yes 62 -1.31 No 28 0.88 Yes -28 0.9 Yes 42 70.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 48191211 - NM_015401 HDAC7 1 2.07 0.36 18 7.75 82.49 27 5.48 No 14 1.04 Yes 26 0.97 Yes -26 0.95 Yes 44 91.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 71550619 - NM_018486 HDAC8 1 3.64 0.93 41 8.19 92.85 24 5.1 No 11 0.31 No 0 0 No -23 0.93 Yes 47 94.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 71550727 - NM_018486 HDAC8 1 6.19 1.54 50 5.12 79.85 48 8.12 Yes 35 2.48 Yes 18 0.22 Yes -47 0.8 Yes 23 93.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 71572328 - NM_018486 HDAC8 1 0.38 0.13 8 5.15 80.37 29 6.22 Yes 9 0.02 No 0 0 No -28 0.92 Yes 42 92.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 71605146 - NM_018486 HDAC8 1 0.31 0.1 7 7.27 86.44 21 7.19 Yes 75 0.85 Yes 0 0 No -20 0.77 Yes 50 85.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 71650736 - NM_018486 HDAC8 1 0.38 0.14 9 3.68 79.76 22 4.79 No 39 -3.7 No 0 0 No -21 0.91 Yes 49 92.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 71681953 - NM_018486 HDAC8 1 0.62 0.22 14 -9.94 69.93 87 8.7 Yes 52 1.53 Yes 25 0.85 Yes -21 0.54 No 35 61.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 71682293 - NM_018486 HDAC8 1 0.57 0.17 11 3.53 74.45 27 4.14 No 46 0.25 No 0 0 No -26 0.82 Yes 44 77.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 71683397 - NM_018486 HDAC8 1 0.26 0.1 7 6.92 88.44 22 5.98 Yes 9 0.91 Yes 0 0 No -21 0.6 No 49 55.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 71694580 - NM_018486 HDAC8 1 41.96 14.65 72 9.72 93.09 32 6.82 Yes 19 1.38 Yes 26 0.83 Yes -31 0.83 Yes 39 74.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 71710851 - NM_018486 HDAC8 1 1.53 0.92 40 -0.83 0 16 3.87 No 13 0.95 Yes 0 0 No -34 0.62 No 36 63.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 71714232 - NM_018486 HDAC8 1 1.2 0.72 36 9.66 93.08 23 5.85 Yes 10 1 Yes 0 0 No -31 0.76 Yes 39 88.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 71782325 - NM_018486 HDAC8 1 7.46 2.99 67 10.01 82.56 34 6.78 Yes 21 1.91 Yes 0 0 No -33 0.88 Yes 37 94.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 71787647 - NM_018486 HDAC8 1 23.47 9.4 72 5.71 80.78 33 4.81 No 53 2.03 Yes 25 0.86 Yes -25 0.31 No 45 75.94 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 18541975 + NM_001321868 HDAC9 1 4.34 1.1 39 9.29 89.1 30 5.6 Yes 17 0.91 Yes 29 0.74 Yes -29 0.6 No 41 65.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 18542203 + NM_001321868 HDAC9 1 1.51 0.49 21 9.34 88.13 31 5.77 Yes 1 0.41 No 30 0.59 Yes -22 0.4 No 48 34.59 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 18582791 + NM_001321868 HDAC9 1 2.7 0.97 32 9.97 92.14 16 3.98 No 28 0.73 No 23 0.88 Yes -23 0.96 Yes 47 97.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 18584503 + NM_001321868 HDAC9 1 0.55 0.26 14 9.79 97.1 24 6.49 Yes 11 1.52 Yes 0 0 No -23 0.88 Yes 47 80.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 18668972 + NM_001321868 HDAC9 1 134.11 22.92 72 8.24 78.77 39 8.24 Yes 57 1.27 Yes 32 0.63 Yes -38 0.59 No 32 62.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 125597198 - NM_016063 HDDC2 1 0.19 0.43 23 8.63 76.98 66 10.06 Yes 53 0.88 Yes 0 0 No -43 0.59 No 32 63.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 125597747 - NM_016063 HDDC2 1 0.15 0.36 21 8.67 90.14 37 6.01 Yes 44 1.78 Yes 0 0 No -21 0.8 Yes 49 87.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 125614052 - NM_016063 HDDC2 1 0.19 0.32 15 -5 0 22 4.34 No 41 -3.95 No 0 0 No -27 0.58 No 43 64.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 125618090 - NM_016063 HDDC2 1 0.09 0.14 7 5.62 81.86 22 4.6 No -3 0.17 No 0 0 No -21 0.85 Yes 49 82.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 125618716 - NM_016063 HDDC2 1 0.13 0.22 12 10.29 82.92 16 5.3 No 3 0.38 No 23 0.53 Yes -23 0.62 No 47 63.92 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 125620520 - NM_016063 HDDC2 1 0.18 0.24 14 1.14 0 26 6.76 Yes 66 1.1 Yes 0 0 No -25 0.59 No 38 54.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 125620524 - NM_016063 HDDC2 1 0.07 0.11 8 -1.38 83.92 22 6.46 Yes 62 1.1 Yes 0 0 No -21 0.56 No 42 61.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91474787 - NM_001286451 HDDC3 1 5.37 2.81 66 6.55 88.22 17 6.67 Yes 4 0.79 Yes 24 0.54 Yes -27 0.47 No 43 47.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 156713650 - NM_001126050 HDGF 1 0.02 0.14 8 4.17 67.66 24 5.38 No 38 1.09 Yes 0 0 No -50 0.59 No 59 44.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 156714132 - NM_001126050 HDGF 1 0.02 0.13 9 1.24 0 16 3.59 No 20 0.79 Yes 0 0 No -32 0.9 Yes 38 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156714162 - NM_001126050 HDGF 1 0.13 1.17 45 -0.85 73.58 16 5.1 No 47 -3.51 No 23 0.93 Yes -19 0.56 No 51 67.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156714343 - NM_001126050 HDGF 1 0.11 0.89 36 8.77 80.06 23 5.39 No 34 1.38 Yes 0 0 No -22 0.42 No 48 79.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 156714363 - NM_001126050 HDGF 1 1.28 10.88 72 5.84 82.03 27 5.29 No 14 1.13 Yes 26 0.95 Yes -26 0.91 Yes 44 92.57 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156714392 - NM_001126050 HDGF 1 0.04 0.4 21 -3.47 63 19 5 No 63 -2.66 No 26 0.95 Yes -18 0.69 Yes 52 39.5 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 156714902 - NM_001126050 HDGF 1 0.07 0.39 21 -1.56 81.14 21 4.97 No 30 0.08 No 0 0 No -21 0.47 No 28 67.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 156714919 - NM_001126050 HDGF 1 0.07 0.39 24 1.11 66.88 26 5.39 No 73 -2.13 No 0 0 No -25 0.96 Yes 45 96.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 156714957 - NM_001126050 HDGF 1 0.17 0.99 42 -11.01 0 10 4 No 35 -2.56 No 27 0.78 Yes -9 0.33 No 47 25.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 4493702 + NM_001348169 HDGFRP2 1 4.33 4.08 71 3.4 79.31 34 7.3 Yes 15 2.03 Yes 0 0 No -27 0.96 Yes 43 96.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4496915 + NM_001348169 HDGFRP2 1 0.39 0.29 16 7.26 90.21 33 5.74 Yes 39 1.42 Yes 26 0.75 Yes -51 0.49 No 19 87.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 4501473 + NM_001348169 HDGFRP2 1 0.21 0.17 11 8.26 80.14 24 6.71 Yes 11 0.65 No 23 0.94 Yes -23 0.96 Yes 47 95.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 4501925 + NM_001348169 HDGFRP2 1 33.18 24.18 72 6.25 77.29 29 6.78 Yes 16 1.42 Yes 25 0.96 Yes -28 0.95 Yes 42 96.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 83820083 - NM_016073 HDGFRP3 1 0.17 0.4 21 2.62 75.06 22 5 No 38 -3.85 No 0 0 No -21 0.76 Yes 49 73.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 83820099 - NM_016073 HDGFRP3 1 0.1 0.25 16 4.8 72.82 25 4.89 No 61 0 No 0 0 No -24 0.71 Yes 46 60.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 83861061 - NM_016073 HDGFRP3 1 1.02 1.08 41 10.48 88.27 33 7.05 Yes 60 0.35 No 32 0.21 Yes -32 0.49 No 38 68.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 83875562 - NM_016073 HDGFRP3 1 0.17 0.25 11 9.42 85.17 22 4.26 No 9 0.99 Yes 0 0 No -21 0.89 Yes 49 87.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 44638158 - NM_001318765 HDHD2 1 0.5 0.44 23 6.24 66.9 25 7 Yes 41 0.73 No 0 0 No -24 0.63 No 46 38.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 44661049 - NM_001318765 HDHD2 1 2.62 0.19 14 5.81 75.65 25 6 Yes 32 0.91 Yes 0 0 No -24 0.7 Yes 46 55.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 44663668 - NM_001318765 HDHD2 1 3.44 0.85 33 2.87 78.83 26 5 No 53 -3.01 No 25 0.61 Yes -25 0.47 No 45 47.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 44663684 - NM_001318765 HDHD2 1 0.51 0.13 8 -13.81 0 10 3.87 No 37 -3.36 No 25 0.61 Yes -13 0.44 No 59 39.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 44663705 - NM_001318765 HDHD2 1 0.63 0.14 8 -3.78 0 21 5.2 No 16 -2.03 No 25 0.61 Yes -20 0.39 No 50 25.13 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 44663710 - NM_001318765 HDHD2 1 0.76 0.14 9 -2.15 68.99 16 4.69 No 47 -1.92 No 27 0.78 Yes -23 0.36 No 43 50.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 44675480 - NM_001318765 HDHD2 1 1.47 0.32 19 9.23 86.33 29 7.31 Yes 16 1.46 Yes 29 0.6 Yes -35 0.42 No 35 67.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242170354 - NM_001320967 HDLBP 1 0.02 0.21 13 4.38 0 9 3.87 No 14 1.62 Yes 0 0 No -26 0.86 Yes 44 89.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242174687 - NM_001320967 HDLBP 1 0.03 0.18 12 -5.9 0 44 7.54 Yes 76 0.59 No 23 0.8 Yes -43 0.5 No 27 64.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242174691 - NM_001320967 HDLBP 1 0.05 0.35 19 -2.44 64.36 40 7.28 Yes 72 0.59 No 35 0.22 Yes -39 0.65 No 31 86.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 242178194 - NM_001320967 HDLBP 1 0.09 0.63 31 -8.38 0 12 4.24 No 47 1.1 Yes 0 0 No -50 0.72 Yes 20 86.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242179239 - NM_001320967 HDLBP 1 0.05 0.31 20 -3.62 0 37 7.65 Yes 24 0.9 Yes 27 0.91 Yes -24 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 242179556 - NM_001320967 HDLBP 1 0.02 0.11 7 -4.82 0 13 4.36 No 0 -1.2 No 24 0.97 Yes -55 0.75 Yes 13 41.75 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 242179580 - NM_001320967 HDLBP 1 0.12 0.82 34 5.5 81.54 34 6.15 Yes 0 0.43 No 31 0.4 Yes -31 0.84 Yes 37 75.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 242186516 - NM_001320967 HDLBP 1 0.55 2.83 69 9.1 73.96 26 6.32 Yes 57 0.53 No 0 0 No -25 0.83 Yes 41 64.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 242189084 - NM_001320967 HDLBP 1 0.02 0.14 9 11.14 93.09 23 8.52 Yes 70 -3.74 No 0 0 No -20 0.55 No 50 70.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 242189344 - NM_001320967 HDLBP 1 0.03 0.13 9 6.55 80.46 29 5.69 Yes 66 1.21 Yes 0 0 No -29 0.67 Yes 41 56.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 242189389 - NM_001320967 HDLBP 1 0.05 0.26 12 -0.75 0 10 4 No 21 1.22 Yes 0 0 No -33 0.86 Yes 37 78.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242194912 - NM_001320967 HDLBP 1 0.06 0.35 19 1.96 83.49 18 3.7 No 74 -6.84 No 0 0 No -40 0.33 No 52 44.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 242194927 - NM_001320967 HDLBP 1 1.35 7.65 72 0.26 71.7 26 5.19 No 74 0.46 No 26 0.69 Yes -25 0.53 No 45 74.19 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 242194987 - NM_001320967 HDLBP 1 0.02 0.11 7 -11.68 0 16 4.22 No 24 1.2 Yes 18 0.33 Yes -26 0.6 No 34 43.53 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242194990 - NM_001320967 HDLBP 1 0.04 0.19 11 -5.99 0 13 3.87 No 21 1.2 Yes 18 0.33 Yes -23 0.56 No 37 57.24 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242202345 - NM_001320967 HDLBP 1 0.02 0.14 8 1.83 78.25 28 9.36 Yes 15 1.74 Yes 30 0.84 Yes -35 0.42 No 35 64.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242204003 - NM_001320967 HDLBP 1 0.02 0.18 10 3.56 76.44 14 4.92 No 45 0.86 Yes 0 0 No -57 0.69 Yes 50 58.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 242206043 - NM_001320967 HDLBP 1 0.03 0.26 17 4.78 84.64 39 7.28 Yes NA NA NA 27 0.72 Yes -39 0.44 No 43 66.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242206269 - NM_001320967 HDLBP 1 0.03 0.21 12 1.72 0 14 2.8 No 69 1.32 Yes 0 0 No -20 0.64 No 50 60.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242206299 - NM_001320967 HDLBP 1 0.17 1.03 41 7.37 72.1 26 5.66 Yes 39 1.33 Yes 0 0 No -25 0.54 No 30 44.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242206299 - NM_001320967 HDLBP 1 0.08 0.51 24 7.37 72.1 26 5.66 Yes 39 1.33 Yes 0 0 No -25 0.54 No 30 44.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242206319 - NM_001320967 HDLBP 1 0.02 0.11 8 -4.5 0 25 5.55 No 19 1.36 Yes 0 0 No -31 0.37 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242207124 - NM_001320967 HDLBP 1 0.1 0.61 27 7.51 82.61 25 5.57 Yes 12 1.04 Yes 24 0.91 Yes -24 0.91 Yes 46 92.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 242208369 - NM_001320967 HDLBP 1 0.95 1.25 44 6.96 81.23 15 4.27 No 51 -2.88 No 26 0.35 Yes -20 0.51 No 50 61.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242208482 - NM_001320967 HDLBP 1 0.24 0.31 15 -2.52 0 15 4.47 No 40 1.22 Yes 0 0 No -14 0.55 No 56 43.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242208521 - NM_001320967 HDLBP 1 0.11 0.17 10 6.92 70.48 43 5.43 No 76 1.79 Yes 30 0.5 Yes -30 0.62 No 40 56.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242208573 - NM_001320967 HDLBP 1 0.12 0.14 8 6.54 86.07 24 5.1 No 24 1.8 Yes 0 0 No -23 0.91 Yes 47 97.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242208711 - NM_001320967 HDLBP 1 4.01 5.06 70 9.82 84.21 26 5.77 Yes 13 0.63 No 25 0.82 Yes -25 0.59 No 45 67.06 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242208977 - NM_001320967 HDLBP 1 0.18 0.24 14 8.91 83.88 24 5.29 No 53 -0.28 No 23 0.65 Yes -23 0.58 No 47 67.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 236717952 - NM_018072 HEATR1 1 0.17 0.28 16 4.43 85.24 37 5.88 Yes 62 0.61 No 0 0 No -24 0.58 No 46 45.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 236724568 - NM_018072 HEATR1 1 0.07 0.1 7 -3.5 0 68 6.57 Yes 12 1.4 Yes 0 0 No -27 0.92 Yes 43 84.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236732172 - NM_018072 HEATR1 1 0.11 0.11 7 6.83 74.76 42 6.93 Yes 43 1.13 Yes 0 0 No -41 0.81 Yes 29 86.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236734771 - NM_018072 HEATR1 1 0.07 0.11 7 -11.06 0 31 6.07 Yes 0 0.53 No 0 0 No -30 0.94 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 236754220 - NM_018072 HEATR1 1 0.03 0.11 7 1.61 82.73 20 5.83 Yes 7 1.5 Yes 0 0 No -19 0.69 Yes 51 79.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236759323 - NM_018072 HEATR1 1 0.11 0.21 12 3.4 82.17 17 5.55 No 51 0.4 No 0 0 No -24 0.89 Yes 46 89.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 236762951 - NM_018072 HEATR1 1 0.05 0.13 8 5.4 0 22 3.7 No 2 0.29 No 28 0.8 Yes -21 0.95 Yes 49 97.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 50100283 + NM_001329729 HEATR3 1 0.87 0.15 9 -3.02 0 15 3.87 No 17 2.37 Yes 0 0 No -29 0.89 Yes 41 92.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 50104054 + NM_001329729 HEATR3 1 0.85 0.39 20 8.09 86.28 58 7.35 Yes 45 2.21 Yes 20 0.89 Yes -28 0.47 No 45 42.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 50109965 + NM_001329729 HEATR3 1 0.42 0.31 17 10.96 93.87 40 4.93 No 45 1.38 Yes 0 0 No -23 0.9 Yes 47 87.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 50117999 + NM_001329729 HEATR3 1 0.38 0.28 18 -9.28 63.77 26 5 No 41 1.18 Yes 21 0.24 Yes -25 0.38 No 23 58.7 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 50118018 + NM_001329729 HEATR3 1 3.27 2.31 65 6.35 81.4 12 4.43 No 60 1.2 Yes 21 0.24 Yes -27 0.48 No 49 50.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 50136263 + NM_001329729 HEATR3 1 0.16 0.1 7 9.91 88.21 13 6.24 Yes 0 0.88 Yes 0 0 No -24 0.46 No 46 79.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 50139557 + NM_001329729 HEATR3 1 0.69 0.58 32 7.49 90.65 23 6.91 Yes 51 1.41 Yes 0 0 No -22 0.96 Yes 48 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31764718 - NM_015473 HEATR5A 1 0.77 0.17 11 5.37 78.33 21 6.36 Yes -1 0.04 No 0 0 No -20 0.96 Yes 50 94.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 31765197 - NM_015473 HEATR5A 1 3.75 0.57 27 8.55 85.22 24 5.29 No 20 0.32 No 0 0 No -26 0.51 No 44 64.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31774225 - NM_015473 HEATR5A 1 0.46 0.11 7 4.08 79.06 17 5.45 No -3 0.23 No 0 0 No -23 0.24 No 49 44.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31782559 - NM_015473 HEATR5A 1 0.73 0.15 9 7.5 86.61 32 5.33 No 32 1.82 Yes 0 0 No -31 0.83 Yes 39 67.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 31787495 - NM_015473 HEATR5A 1 0.6 0.13 9 1.04 0 36 5.83 Yes 4 0.43 No 0 0 No -28 0.69 Yes 42 69.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 31855734 - NM_015473 HEATR5A 1 8.68 1.96 61 7.79 82.7 34 4.8 No 55 0.64 No 0 0 No -27 0.68 Yes 43 70.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 31858209 - NM_015473 HEATR5A 1 36.04 3.42 57 3.9 83.37 26 5.27 No 70 0.98 Yes 0 0 No -25 0.72 Yes 45 82.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31858230 - NM_015473 HEATR5A 1 1.01 0.1 7 1.17 67.18 30 5.44 No 49 0.97 Yes 0 0 No -23 0.61 No 47 42.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 31872242 - NM_015473 HEATR5A 1 1.33 0.24 12 4.76 85.75 9 4.79 No 67 1.11 Yes 0 0 No -40 0.61 No 30 42.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 31879751 - NM_015473 HEATR5A 1 6.36 1.07 45 6.99 95.05 30 5.51 No 17 0.62 No 0 0 No -30 0.68 Yes 40 60.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 37217940 - NM_019024 HEATR5B 1 5.87 2.61 66 1.99 78.11 19 6.17 Yes 6 0.17 No 0 0 No -29 0.61 No 41 83.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 37232872 - NM_019024 HEATR5B 1 0.61 0.32 21 9.31 82.31 27 5.1 No 57 -1.88 No 0 0 No -21 0.52 No 49 56.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37249814 - NM_019024 HEATR5B 1 0.18 0.11 8 10.97 86.52 33 3.95 No 51 0.6 No 0 0 No -27 0.73 Yes 43 71.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37267556 - NM_019024 HEATR5B 1 1.42 0.5 27 7.4 80.98 17 4.99 No 4 1.17 Yes 0 0 No -29 0.43 No 41 61.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 37284539 - NM_019024 HEATR5B 1 0.24 0.11 7 9.44 85.03 35 5.78 Yes 22 0.52 No 0 0 No -27 0.56 No 48 70.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 37287269 - NM_019024 HEATR5B 1 0.29 0.14 8 8.72 85.53 14 5.41 No 28 0.47 No 0 0 No -32 0.83 Yes 38 88.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37293051 - NM_019024 HEATR5B 1 0.26 0.14 9 0.66 73.13 19 5.63 Yes 29 0.09 No 0 0 No -27 0.79 Yes 43 77.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37308894 - NM_019024 HEATR5B 1 0.4 0.22 11 4.04 0 27 5.61 Yes 14 0.75 No 0 0 No -26 0.47 No 37 55.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37308899 - NM_019024 HEATR5B 1 1.26 0.64 32 8.9 81.97 22 5.31 No 9 0.75 No 0 0 No -28 0.62 No 42 57.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 58123461 - NM_022070 HEATR6 1 0.57 0.17 12 5.84 84.08 20 5.83 Yes 7 1.37 Yes 19 0.58 Yes -19 0.76 Yes 51 76.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 58125731 - NM_022070 HEATR6 1 0.73 0.15 9 5.51 86.08 24 5.24 No 34 0.99 Yes 23 0.92 Yes -21 0.55 No 49 60.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 58151521 - NM_022070 HEATR6 1 5.06 0.82 35 7.74 81.99 19 5.69 Yes 75 0.87 Yes 18 0.56 Yes -26 0.51 No 52 66.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 58153195 - NM_022070 HEATR6 1 3.09 0.56 23 3.01 0 31 6.51 Yes 18 0.74 No 33 0.83 Yes -33 0.82 Yes 37 92.23 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 138733219 + NM_001326380 HEBP2 1 0.21 0.19 11 10.08 86.87 26 5.27 No 71 1.25 Yes 25 0.86 Yes -26 0.52 No 44 66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 31570430 - NM_015382 HECTD1 1 0.67 0.74 31 9.89 83.65 29 6.25 Yes 42 0.63 No 0 0 No -28 0.63 No 42 79.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 31573146 - NM_015382 HECTD1 1 0.36 0.36 16 9.36 93.31 29 5.39 No 71 1.67 Yes 0 0 No -28 0.74 Yes 42 55.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 31598514 - NM_015382 HECTD1 1 102.88 50.99 72 8.42 84.77 43 6.12 Yes 30 0.57 No 29 0.66 Yes -29 0.6 No 41 71.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 31604763 - NM_015382 HECTD1 1 0.18 0.22 12 -0.58 59.17 35 6.74 Yes 75 1.45 Yes 0 0 No -34 0.81 Yes 36 84.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31605915 - NM_015382 HECTD1 1 0.07 0.11 8 0.07 0 33 5.43 No 29 0.43 No 26 0.52 Yes -32 0.64 No 38 73.38 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 31605919 - NM_015382 HECTD1 1 0.08 0.11 8 -4.35 72.15 29 5.14 No 25 0.44 No 0 0 No -28 0.75 Yes 42 78.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 31607675 - NM_015382 HECTD1 1 0.55 0.92 42 8.87 97.26 46 4.67 No 74 0.33 No 0 0 No -30 0.86 Yes 40 82.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 31609118 - NM_015382 HECTD1 1 0.11 0.19 9 3.72 74.38 34 7.14 Yes 21 0.93 Yes 0 0 No -33 0.54 No 33 64.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 31616517 - NM_015382 HECTD1 1 0.21 0.38 21 3.45 83.28 29 4.74 No 71 -2.53 No 0 0 No -28 0.84 Yes 42 71.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 31617998 - NM_015382 HECTD1 1 0.06 0.11 8 -0.06 0 9 3.23 No 18 0.51 No 0 0 No -39 0.53 No 31 65.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31621902 - NM_015382 HECTD1 1 0.16 0.28 17 7.25 87.44 69 5.59 Yes 67 0.67 No 0 0 No -30 0.44 No 40 64.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31625285 - NM_015382 HECTD1 1 0.12 0.19 10 5.47 77.63 21 7.21 Yes 8 1.19 Yes 0 0 No -20 0.8 Yes 50 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31626505 - NM_015382 HECTD1 1 0.13 0.14 7 -2.72 0 71 10.43 Yes 34 0.91 Yes 0 0 No -31 0.88 Yes 39 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31631881 - NM_015382 HECTD1 1 4.49 4.92 72 7.58 74.38 38 5.33 No 30 -2.05 No 0 0 No -32 0.64 No 38 32.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31632462 - NM_015382 HECTD1 1 0.48 0.54 28 6.74 88.27 24 5.07 No 15 0.58 No 0 0 No -27 0.78 Yes 43 94.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 31641162 - NM_015382 HECTD1 1 0.15 0.15 10 -0.55 0 24 5.05 No 11 0.47 No 0 0 No -23 0.45 No 44 60.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31644259 - NM_015382 HECTD1 1 0.75 0.63 29 7.21 81.13 30 6 Yes 5 1.31 Yes 0 0 No -29 0.69 Yes 41 74.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31647407 - NM_015382 HECTD1 1 0.09 0.14 10 -0.15 72.93 34 6.08 Yes 21 0.98 Yes 0 0 No -33 0.94 Yes 37 96.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31647435 - NM_015382 HECTD1 1 0.08 0.11 7 7.21 85.48 34 5.92 Yes 72 0.83 Yes 0 0 No -28 0.57 No 40 59.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 31654926 - NM_015382 HECTD1 1 0.12 0.14 8 10.6 98.16 28 5.47 No 33 0.63 No 0 0 No -33 0.4 No 37 60.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31672843 - NM_015382 HECTD1 1 0.13 0.19 13 12.47 90.48 38 5.16 No 25 1.54 Yes 32 0.7 Yes -32 0.55 No 38 52.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 31673264 - NM_015382 HECTD1 1 0.15 0.24 11 7.7 85.1 22 4.93 No 1 0.51 No 0 0 No -21 0.58 No 49 59.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31675277 - NM_015382 HECTD1 1 0.26 0.17 10 4.67 85.66 23 5.1 No 35 0.57 No 0 0 No -22 0.91 Yes 48 96.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45469607 - NM_024602 HECTD3 1 0.25 0.29 18 1.57 79.76 21 5.92 Yes 8 1.46 Yes 0 0 No -20 0.84 Yes 50 71.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45469633 - NM_024602 HECTD3 1 1.39 1.57 48 8.82 82.05 14 5.66 Yes 1 0.64 No 18 0.56 Yes -25 0.59 No 45 48.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 45471523 - NM_024602 HECTD3 1 0.3 0.24 14 1.58 70.06 40 6.48 Yes 27 0.24 No 0 0 No -39 0.75 Yes 31 87.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45474012 - NM_024602 HECTD3 1 0.38 0.33 17 -2.1 0 9 3.87 No 4 1.36 Yes 26 0.83 Yes -28 0.49 No 44 75.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 112606611 - NM_001109662 HECTD4 1 3.79 0.92 41 9.35 84.61 28 6.32 Yes 15 1.36 Yes 0 0 No -27 0.96 Yes 43 97.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112609152 - NM_001109662 HECTD4 1 3.42 1.26 50 6.04 78.56 26 6.08 Yes 45 -0.97 No 25 0.54 Yes -25 0.47 No 45 25.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 112614504 - NM_001109662 HECTD4 1 91.97 21.71 72 4.28 82.91 26 5.2 No 67 0.49 No 0 0 No -25 0.94 Yes 45 95.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112614504 - NM_001109662 HECTD4 1 0.46 0.1 7 4.28 82.91 26 5.2 No 67 0.49 No 0 0 No -25 0.94 Yes 45 95.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112619050 - NM_001109662 HECTD4 1 0.22 0.13 7 10.25 94.15 20 5.99 Yes 7 1.72 Yes 0 0 No -26 0.46 No 51 58.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112630167 - NM_001109662 HECTD4 1 1.35 0.54 26 9.33 85.61 24 3.76 No 3 0.43 No 0 0 No -23 0.85 Yes 47 82.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112630992 - NM_001109662 HECTD4 1 1.82 0.81 37 -0.18 0 24 4.99 No 7 0.39 No 0 0 No -23 0.91 Yes 47 95.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112662945 - NM_001109662 HECTD4 1 0.36 0.18 13 -0.07 0 27 8.18 Yes 14 1.36 Yes 0 0 No -26 0.38 No 44 72.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112662950 - NM_001109662 HECTD4 1 2.28 1.08 46 5.99 83.96 22 8 Yes 9 1.37 Yes 0 0 No -24 0.4 No 49 74.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112664625 - NM_001109662 HECTD4 1 3.27 1.69 55 5.21 83.04 20 7.86 Yes 3 0.29 No 26 0.52 Yes -19 0.88 Yes 51 80.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112665578 - NM_001109662 HECTD4 1 0.28 0.14 8 6.33 90.72 23 5.19 No 23 1.26 Yes 0 0 No -22 0.72 Yes 48 72.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112665951 - NM_001109662 HECTD4 1 3.2 1.69 57 6.15 84.82 22 6.38 Yes 9 0.98 Yes 0 0 No -21 0.9 Yes 49 86.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112665991 - NM_001109662 HECTD4 1 0.3 0.15 9 6.79 92.55 16 5.07 No 44 0.33 No 25 0.27 Yes -20 0.51 No 50 53.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 112670887 - NM_001109662 HECTD4 1 2.11 1.17 49 4.76 80.47 38 6.63 Yes 63 0.64 No 0 0 No -38 0.87 Yes 32 85.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112681587 - NM_001109662 HECTD4 1 2.55 1.01 47 8.48 83.88 23 5.39 No 10 1.37 Yes 23 0.56 Yes -22 0.87 Yes 48 93.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112684844 - NM_001109662 HECTD4 1 0.92 0.51 27 4.65 88.95 16 5.1 No 50 0.28 No 0 0 No -23 0.89 Yes 47 88.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112684894 - NM_001109662 HECTD4 1 1 0.56 26 -0.75 68.65 29 4.88 No 46 0.65 No 25 0.78 Yes -22 0.23 No 58 19.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 112691994 - NM_001109662 HECTD4 1 14.87 5.15 71 11.36 92.68 35 5.92 Yes 57 0.25 No 23 0.97 Yes -34 0.74 Yes 36 72.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112696979 - NM_001109662 HECTD4 1 0.49 0.17 9 4.35 76.89 28 6.62 Yes 35 1.1 Yes 0 0 No -27 0.81 Yes 43 88.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112697014 - NM_001109662 HECTD4 1 0.48 0.19 11 6.18 84.85 31 5.57 Yes 0 1.15 Yes 0 0 No -30 0.75 Yes 40 85.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112698928 - NM_001109662 HECTD4 1 0.38 0.14 10 10.86 89.93 23 5.74 Yes 10 0.8 Yes 0 0 No -22 0.82 Yes 48 89.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112707631 - NM_001109662 HECTD4 1 0.35 0.22 14 6.61 85.23 14 5.42 No 65 0.09 No 0 0 No -25 0.84 Yes 45 89.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112708261 - NM_001109662 HECTD4 1 0.27 0.15 8 1.38 76.79 29 5.47 No 16 1.72 Yes 0 0 No -28 0.9 Yes 42 96.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112719467 - NM_001109662 HECTD4 1 0.38 0.24 15 7.23 97.81 24 4.23 No 63 0.26 No 0 0 No -23 0.52 No 46 61.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112726570 - NM_001109662 HECTD4 1 0.63 0.39 22 10.11 84.2 23 5.29 No 10 0.53 No 0 0 No -22 0.87 Yes 48 84.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 112732940 - NM_001109662 HECTD4 1 0.29 0.19 12 11.36 95.65 22 6.48 Yes 61 1.84 Yes 0 0 No -31 0.69 Yes 39 47.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 112740598 - NM_001109662 HECTD4 1 1.22 0.82 36 1.15 60.7 55 8.12 Yes 42 1.16 Yes 0 0 No -54 0.93 Yes 16 95.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112741258 - NM_001109662 HECTD4 1 0.22 0.13 8 7.14 79.51 41 4.43 No 67 1.1 Yes 0 0 No -36 0.74 Yes 34 92.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112741917 - NM_001109662 HECTD4 1 0.42 0.29 14 7.42 92.43 37 7.1 Yes 60 1.25 Yes 0 0 No -26 0.51 No 44 74.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112798316 - NM_001109662 HECTD4 1 1.27 0.44 25 6.02 80.4 48 9.46 Yes 35 1.38 Yes 0 0 No -47 0.58 No 23 66.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112813709 - NM_001109662 HECTD4 1 2.09 0.81 32 7.28 85.02 28 5.91 Yes 25 1.99 Yes 0 0 No -27 0.85 Yes 43 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 124689993 - NM_020733 HEG1 1 0.41 0.43 22 5.14 91.16 24 5 No 44 0.53 No 23 0.94 Yes -23 0.84 Yes 47 89.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 124690024 - NM_020733 HEG1 1 0.53 0.54 30 5.88 82.99 26 6.23 Yes 13 0.54 No 23 0.94 Yes -25 0.74 Yes 45 61.21 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 124690949 - NM_020733 HEG1 1 0.57 0.58 32 2.66 63.97 26 5.61 Yes 13 0.54 No 0 0 No -29 0.4 No 41 40.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 124720776 - NM_020733 HEG1 1 0.34 0.39 21 5.1 67.9 63 6.63 Yes 45 0.78 Yes 0 0 No -23 0.72 Yes 47 58.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 124721178 - NM_020733 HEG1 1 0.45 0.54 28 3.4 77.97 19 6.12 Yes 6 1.88 Yes 25 0.9 Yes -18 0.52 No 52 73.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 124724209 - NM_020733 HEG1 1 0.14 0.11 7 0.89 0 28 5.54 No 15 0.92 Yes 0 0 No -27 0.91 Yes 43 93.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 124731962 - NM_020733 HEG1 1 2.48 0.13 8 8.89 84.2 35 6.92 Yes 22 0.88 Yes 0 0 No -35 0.57 No 35 58.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 124733857 - NM_020733 HEG1 1 1510.77 74.22 72 8.21 77.25 14 5.12 No 1 0.95 Yes 27 0.83 Yes -27 0.89 Yes 43 90.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 124745817 - NM_020733 HEG1 1 0.87 0.58 22 7.05 95.43 29 5.56 Yes 16 0.83 Yes 0 0 No -28 0.79 Yes 42 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 66698573 + NM_033647 HELB 1 2.8 0.78 35 6.19 89.32 28 5.74 Yes 36 -3.36 No 0 0 No -28 0.34 No 38 66.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 66698811 + NM_033647 HELB 1 0.99 0.24 13 3.76 71.9 18 6.73 Yes 52 0.26 No 0 0 No -26 0.73 Yes 44 72.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 66718686 + NM_033647 HELB 1 0.82 0.22 13 5.29 74.5 35 6.58 Yes 16 1.01 Yes 22 0.82 Yes -34 0.48 No 36 65.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 66720520 + NM_033647 HELB 1 1.07 0.31 17 9.84 89.4 18 5.38 No 71 1.25 Yes 0 0 No -22 0.91 Yes 48 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96306117 + NM_001289071 HELLS 1 0.43 0.54 22 0.01 63.12 27 5.44 No 14 0.85 Yes 20 0.74 Yes -26 0.75 Yes 44 75.99 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 96306923 + NM_001289071 HELLS 1 0.25 0.61 33 4.21 80.81 29 5.66 Yes 16 0.87 Yes 0 0 No -28 0.92 Yes 42 95.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96322772 + NM_001289071 HELLS 1 0.17 0.32 16 8.44 83.36 44 4.53 No 70 -3.93 No 0 0 No -26 0.53 No 44 39.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 96327688 + NM_001289071 HELLS 1 0.16 0.26 11 -5.2 84.41 36 6.93 Yes 23 0.92 Yes 0 0 No -35 0.56 No 35 51.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 96332737 + NM_001289071 HELLS 1 0.07 0.11 8 4.7 83.57 35 7.86 Yes 22 1.26 Yes 0 0 No -34 0.6 No 36 69.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 96335364 + NM_001289071 HELLS 1 0.03 0.11 8 4.15 79.93 20 5.66 Yes 7 1.16 Yes 0 0 No -19 0.8 Yes 51 87.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96335891 + NM_001289071 HELLS 1 0.03 0.13 7 10.31 95.16 23 7.79 Yes 42 0.28 No 0 0 No -22 0.77 Yes 48 81.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 96336680 + NM_001289071 HELLS 1 0.05 0.15 10 1.55 61.36 27 6.71 Yes 14 1.25 Yes 0 0 No -26 0.9 Yes 44 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96343744 + NM_001289071 HELLS 1 0.66 2.17 55 8.63 79.07 38 7.31 Yes 68 -2.23 No 30 0.68 Yes -30 0.72 Yes 40 76.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 96349853 + NM_001289071 HELLS 1 0.09 0.25 15 -4.2 0 19 4.21 No 22 -2.8 No 0 0 No -18 0.51 No 52 62.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 96356767 + NM_001289071 HELLS 1 0.63 1.17 46 3.8 72 28 5.26 No 39 0.14 No 30 0.81 Yes -27 0.68 Yes 43 71.97 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 84342826 - NM_001297756 HELQ 1 1.94 0.35 20 3.22 74.33 44 5.02 No 67 0.38 No 0 0 No -33 0.82 Yes 37 90.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84344585 - NM_001297756 HELQ 1 0.91 0.18 12 6.85 87.19 26 5.05 No 0 0.44 No 0 0 No -19 0.64 No 51 86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84344709 - NM_001297756 HELQ 1 1.48 0.25 15 7.86 86.9 25 6.75 Yes 12 0.2 No 0 0 No -24 0.71 Yes 46 61.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84358160 - NM_001297756 HELQ 1 0.52 0.11 7 8.97 75.5 40 5.96 Yes 62 -4.01 No 0 0 No -21 0.63 No 43 77.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84358264 - NM_001297756 HELQ 1 2.05 0.5 27 6.88 84.03 14 4.1 No 1 0.79 Yes 26 0.7 Yes -21 0.54 No 49 42.83 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 84365195 - NM_001297756 HELQ 1 0.38 0.11 8 5.04 83.64 12 4.9 No 15 0.79 Yes 0 0 No -23 0.69 Yes 47 72.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84368140 - NM_001297756 HELQ 1 3.18 0.5 23 5.73 83.56 18 5.3 No 56 -3.94 No 0 0 No -23 0.61 No 49 59.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84368182 - NM_001297756 HELQ 1 1.85 0.31 16 0.87 0 17 4 No 14 -2.85 No 0 0 No -20 0.37 No 44 48.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65103120 - NM_014877 HELZ 1 0.12 0.11 7 11.93 91.12 50 6.65 Yes 14 0.63 No 0 0 No -26 0.9 Yes 44 85.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 65126100 - NM_014877 HELZ 1 1.96 1.44 50 3.95 77.83 41 9.5 Yes 28 1.71 Yes 0 0 No -40 0.43 No 30 61.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65142043 - NM_014877 HELZ 1 0.94 0.63 28 4.93 75.52 40 7.55 Yes 27 1.29 Yes 42 0.39 Yes -39 0.69 Yes 31 69.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 65144811 - NM_014877 HELZ 1 0.53 0.42 22 7.52 90.93 25 3.57 No 5 0.79 Yes 0 0 No -22 0.88 Yes 48 85.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 65146135 - NM_014877 HELZ 1 0.33 0.22 13 7.06 76.9 34 5.92 Yes 49 1.07 Yes 27 0.67 Yes -33 0.59 No 37 56.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 65156482 - NM_014877 HELZ 1 39 19.6 72 4.83 81.19 49 6.3 Yes 36 0.2 No 32 0.82 Yes -32 0.74 Yes 38 65.74 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 65169200 - NM_014877 HELZ 1 0.79 0.46 21 7.06 82.68 20 4.13 No 70 0.85 Yes 0 0 No -28 0.94 Yes 42 95.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 65172786 - NM_014877 HELZ 1 0.27 0.18 10 7.5 86.16 33 6.29 Yes 74 0.66 No 32 0.59 Yes -27 0.55 No 43 61.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 65175853 - NM_014877 HELZ 1 0.24 0.19 9 6.22 79.03 31 4.37 No 70 0.49 No 25 0.68 Yes -23 0.6 No 47 73.65 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 65181262 - NM_014877 HELZ 1 0.64 0.57 25 1.09 67.9 59 7.6 Yes 75 -3.38 No 0 0 No -43 0.7 Yes 27 77.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 65231594 - NM_014877 HELZ 1 0.25 0.21 11 3.46 84.95 25 5.2 No 64 1.23 Yes 0 0 No -24 0.63 No 46 58.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65235397 - NM_014877 HELZ 1 2.93 2.51 56 2.86 77.62 26 6.32 Yes 13 1.33 Yes 0 0 No -25 0.88 Yes 45 92.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62192548 - NM_001037335 HELZ2 1 1.13 0.54 27 6.44 83.12 26 5.06 No 13 0.29 No 0 0 No -25 0.86 Yes 45 86.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62205152 - NM_001037335 HELZ2 1 1.13 0.39 20 7.38 81.34 14 5.4 No 33 1.04 Yes 0 0 No -33 0.4 No 37 56.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 50609507 + NM_016173 HEMK1 1 8.35 2.44 63 6.82 72.77 29 5.38 No 42 -2.21 No 24 0.82 Yes -28 0.92 Yes 42 90.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 50612272 + NM_016173 HEMK1 1 0.97 0.18 10 2.99 73.69 24 4.89 No 11 1.16 Yes 0 0 No -23 0.73 Yes 47 61.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 50617549 + NM_016173 HEMK1 1 1.18 0.32 20 1.61 64.83 30 5.98 Yes 17 1.49 Yes 0 0 No -29 0.72 Yes 41 87.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50619042 + NM_016173 HEMK1 1 1.73 0.35 17 3.59 79.02 24 4.55 No -4 -0.7 No 0 0 No -23 0.77 Yes 47 84.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 109192056 - NM_001102592 HENMT1 1 1.07 0.17 8 11 86.43 40 6.78 Yes 27 1.75 Yes 39 0.73 Yes -39 0.96 Yes 31 96.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 63914236 - NM_003922 HERC1 1 0.58 0.25 15 -0.92 66.81 21 4.66 No 72 0.33 No 0 0 No -20 0.79 Yes 50 49.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 63916522 - NM_003922 HERC1 1 0.28 0.15 10 0.75 0 25 5.71 Yes 12 1.34 Yes 0 0 No -27 0.76 Yes 43 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 63921897 - NM_003922 HERC1 1 0.19 0.11 8 4.58 75.45 34 6.73 Yes 27 0.66 No 0 0 No -33 0.91 Yes 37 87.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 63929311 - NM_003922 HERC1 1 0.29 0.19 13 0.19 75.65 18 4.74 No 72 0.2 No 0 0 No -18 0.55 No 52 58.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 63929334 - NM_003922 HERC1 1 1.05 0.64 32 -1.48 62.55 39 6.2 Yes 49 0.2 No 27 0.79 Yes -25 0.54 No 43 57.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 63930817 - NM_003922 HERC1 1 0.73 0.39 21 9.02 91.28 39 6.32 Yes 26 1.15 Yes 0 0 No -38 0.72 Yes 32 80.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63938832 - NM_003922 HERC1 1 0.28 0.17 10 6.93 80.12 28 7.68 Yes 15 1.47 Yes 0 0 No -27 0.93 Yes 43 95.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63944710 - NM_003922 HERC1 1 0.58 0.39 18 0.73 58.91 26 5.36 No 13 0.79 Yes 0 0 No -25 0.8 Yes 45 67.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 63946575 - NM_003922 HERC1 1 10.61 6.53 71 6.35 92.39 34 5.36 No 53 1.66 Yes 0 0 No -33 0.78 Yes 37 90.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63946578 - NM_003922 HERC1 1 0.99 0.61 29 5.12 76.53 31 5.12 No 50 1.66 Yes 0 0 No -30 0.86 Yes 40 93.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63948133 - NM_003922 HERC1 1 0.2 0.14 9 5.3 86.61 17 4.79 No 37 0.58 No 0 0 No -28 0.29 No 21 66.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 63950933 - NM_003922 HERC1 1 3.14 1.53 55 -5.07 0 13 4.36 No 34 -1.68 No 22 0.45 Yes -38 0.67 Yes 32 69.45 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 63951774 - NM_003922 HERC1 1 0.47 0.22 14 5.95 78.41 26 5.23 No 49 0.99 Yes 0 0 No -25 0.88 Yes 45 89.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63952133 - NM_003922 HERC1 1 4.03 2.58 65 -1.3 67.58 36 7.63 Yes 23 0.03 No 0 0 No -26 0.59 No 35 78.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 63955373 - NM_003922 HERC1 1 0.21 0.14 9 2.2 0 12 4.12 No 21 0.54 No 0 0 No -33 0.58 No 12 31.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 63955381 - NM_003922 HERC1 1 0.26 0.15 9 6.45 83.54 26 5.03 No 13 0.56 No 0 0 No -25 0.68 Yes 12 36.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 63958624 - NM_003922 HERC1 1 0.78 0.42 25 7.81 85.48 21 5.49 No 72 0.62 No 0 0 No -20 0.73 Yes 50 80.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 63961646 - NM_003922 HERC1 1 0.34 0.17 10 8.93 92.4 32 6.11 Yes 19 -1.97 No 0 0 No -31 0.6 No 42 65.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 63964892 - NM_003922 HERC1 1 0.49 0.35 17 -0.05 80.94 23 8.6 Yes 10 1.57 Yes 0 0 No -34 0.61 No 36 81.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 63967293 - NM_003922 HERC1 1 281.62 44.4 72 3.01 75.58 28 5.66 Yes 50 1.83 Yes 31 0.55 Yes -27 0.48 No 39 53.85 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 63974299 - NM_003922 HERC1 1 0.15 0.15 9 9.73 90.19 34 6.78 Yes 51 0.53 No 0 0 No -33 0.88 Yes 37 93.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 63978729 - NM_003922 HERC1 1 1 0.67 28 -2.91 0 14 3.87 No 15 2.4 Yes 0 0 No -27 0.82 Yes 43 93.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63978732 - NM_003922 HERC1 1 6.15 4.1 71 -3.27 74.62 25 5.2 No 12 2.41 Yes 0 0 No -24 0.82 Yes 46 94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63984715 - NM_003922 HERC1 1 0.68 0.33 19 -0.2 0 19 4.51 No 64 1.24 Yes 0 0 No -18 0.65 No 52 68.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 63986746 - NM_003922 HERC1 1 1.25 1.04 41 3.49 78.25 24 5.86 Yes 11 1.37 Yes 0 0 No -24 0.58 No 46 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 63987929 - NM_003922 HERC1 1 0.34 0.19 12 9.85 87.55 41 6.33 Yes 40 0.71 No 0 0 No -23 0.5 No 34 72.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 64005099 - NM_003922 HERC1 1 0.39 0.35 18 -0.53 69.91 42 6.72 Yes 29 0.84 Yes 36 0.46 Yes -32 0.44 No 38 70.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 64005099 - NM_003922 HERC1 1 0.38 0.35 21 -0.53 69.91 42 6.72 Yes 29 0.84 Yes 36 0.46 Yes -32 0.44 No 38 70.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 64005892 - NM_003922 HERC1 1 1.39 0.99 40 3.8 67.51 49 8.7 Yes 36 1.48 Yes 29 0.68 Yes -39 0.5 No 22 66.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 64030386 - NM_003922 HERC1 1 0.89 0.54 28 12.07 95.03 24 6.88 Yes 11 0.44 No 0 0 No -23 0.44 No 43 42.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 64031315 - NM_003922 HERC1 1 0.31 0.17 8 4.3 83.67 31 5.89 Yes 18 0.8 Yes 0 0 No -30 0.72 Yes 40 63.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 64038058 - NM_003922 HERC1 1 0.17 0.1 7 6 82.59 31 5.4 No -3 1.32 Yes 0 0 No -26 0.43 No 46 49.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 64038162 - NM_003922 HERC1 1 0.91 0.5 28 2.84 75.32 21 6 Yes 8 0.93 Yes 0 0 No -20 0.78 Yes 50 76.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64043830 - NM_003922 HERC1 1 0.34 0.13 9 7.11 86.8 27 5.27 No 11 0.61 No 0 0 No -26 0.47 No 44 78.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 64047203 - NM_003922 HERC1 1 0.16 0.1 7 5.22 81.49 22 4.13 No 9 0.86 Yes 0 0 No -25 0.62 No 45 69.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 64072752 - NM_003922 HERC1 1 1.4 0.22 14 4.57 80.12 22 5.74 Yes 9 1.09 Yes 21 0.62 Yes -21 0.85 Yes 49 87.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 64072755 - NM_003922 HERC1 1 1.14 0.19 12 5.12 85.02 19 5.48 No 6 1.12 Yes 21 0.62 Yes -18 0.72 Yes 52 84.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 28377544 - NM_004667 HERC2 1 0.43 0.13 8 12.59 90.76 27 5.66 Yes 57 1.83 Yes 0 0 No -26 0.61 No 45 55.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 28388062 - NM_004667 HERC2 1 0.39 0.11 7 4.53 74.86 32 5.66 Yes 27 -1.01 No 0 0 No -31 0.73 Yes 39 81.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 28389395 - NM_004667 HERC2 1 2.03 0.47 29 0.92 69.54 21 5.92 Yes 30 -2.44 No 23 0.18 Yes -28 0.78 Yes 42 84.68 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 28421918 - NM_004667 HERC2 1 0.97 0.35 19 -8.06 64.6 27 9.74 Yes 14 0.76 No 29 0.77 Yes -26 0.89 Yes 44 83.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 28424208 - NM_004667 HERC2 1 1.88 0.5 26 0.95 60.68 26 5.13 No 54 0.72 No 29 0.14 Yes -26 0.65 No 44 57.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 28427650 - NM_004667 HERC2 1 0.66 0.28 16 -3.7 0 12 4.24 No 37 2.23 Yes 0 0 No -52 0.53 No 21 73.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 28463815 - NM_004667 HERC2 1 1.64 0.75 39 1.17 81.4 24 4.6 No 11 0.37 No 0 0 No -31 0.51 No 39 43.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 28475669 - NM_004667 HERC2 1 1.05 0.6 30 2.61 77.96 26 4.98 No 35 0.55 No 26 0.79 Yes -25 0.83 Yes 45 81.36 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 28483904 - NM_004667 HERC2 1 8.03 2.79 69 5.21 95.03 12 4.69 No 25 1.36 Yes 0 0 No -19 0.5 No 51 33.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 28501137 - NM_004667 HERC2 1 0.58 0.25 14 4.46 0 14 3.59 No 20 0.28 No 0 0 No -32 0.7 Yes 46 64.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 28501390 - NM_004667 HERC2 1 3.78 1.43 46 2.09 76.6 12 4.76 No 34 1.14 Yes 0 0 No -46 0.89 Yes 24 78.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 28501415 - NM_004667 HERC2 1 0.29 0.13 9 6.56 80.38 22 5.47 No 9 1.15 Yes 0 0 No -21 0.82 Yes 49 88.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 28502300 - NM_004667 HERC2 1 0.7 0.21 11 7.29 89.04 27 5.48 No 71 0.48 No 0 0 No -23 0.76 Yes 47 80.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 28504937 - NM_004667 HERC2 1 0.38 0.13 7 10.66 85.86 30 7.81 Yes 17 1.59 Yes 0 0 No -29 0.95 Yes 41 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 28506165 - NM_004667 HERC2 1 1.11 0.68 33 6.48 90.92 21 5.2 No 21 0.99 Yes 0 0 No -28 0.23 No 50 46.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 28517499 - NM_004667 HERC2 1 0.93 0.29 15 7.67 86.36 32 5.82 Yes 60 0.73 No 0 0 No -31 0.49 No 34 62.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 28519559 - NM_004667 HERC2 1 1.69 0.47 26 -2.39 0 12 4.24 No 64 -4.98 No 0 0 No -53 0.58 No 55 58.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 28519572 - NM_004667 HERC2 1 0.65 0.14 8 0.45 72.89 20 3.84 No 51 -4.16 No 0 0 No -40 0.91 Yes 30 46.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 28543776 - NM_004667 HERC2 1 0.57 0.32 20 6.67 83.82 19 7.07 Yes 6 1.26 Yes 18 0.68 Yes -18 0.69 Yes 52 88.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 28558021 - NM_004667 HERC2 1 2.12 0.79 39 4.16 81.7 31 5.87 Yes 68 0.77 No 0 0 No -24 0.46 No 37 57.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 28565611 - NM_004667 HERC2 1 5.94 2.31 62 12.09 95.13 24 7.07 Yes 32 1.4 Yes 23 0.88 Yes -23 0.76 Yes 47 88.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 23283417 - NR_002824 HERC2P2 1 0.48 0.14 9 6.6 92.67 23 4.62 No 37 0.51 No 23 0.76 Yes -23 0.85 Yes 47 85.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 23285601 - NR_002824 HERC2P2 1 6.6 1.47 52 5.27 78.53 60 7.41 Yes 12 0.92 Yes 0 0 No -24 0.86 Yes 46 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 23300187 - NR_002824 HERC2P2 1 7.2 1.76 56 5.98 79.47 24 5.46 No 45 0.93 Yes 21 0.25 Yes -28 0.7 Yes 43 84.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 23316184 - NR_002824 HERC2P2 1 0.49 0.17 9 1.17 81.4 24 4.64 No 11 0.37 No 0 0 No -31 0.61 No 40 54.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 23325245 - NR_002824 HERC2P2 1 0.61 0.14 7 2.54 67.78 48 7.54 Yes 35 0.93 Yes 26 0.7 Yes -29 0.59 No 41 58.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 23349750 - NR_002824 HERC2P2 1 0.9 0.25 17 7.97 93.04 29 5.44 No 16 0.76 No 28 0.78 Yes -28 0.69 Yes 42 73.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 23350052 - NR_002824 HERC2P2 1 0.41 0.15 10 3.25 80.12 21 5.62 Yes 13 1.23 Yes 0 0 No -25 0.82 Yes 45 89.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 23350055 - NR_002824 HERC2P2 1 3.54 0.99 42 5.2 85.02 18 5.35 No 10 1.25 Yes 0 0 No -22 0.87 Yes 48 92.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 23353698 - NR_002824 HERC2P2 1 0.74 0.24 14 -2.84 63.91 41 6.99 Yes 28 0.47 No 0 0 No -30 0.67 Yes 30 87.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 20659949 - NR_036432 HERC2P3 1 0.95 0.11 8 2.61 77.96 26 4.98 No 61 0.21 No 26 0.8 Yes -25 0.82 Yes 45 80.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 28900640 + NR_036443 HERC2P9 1 10.1 0.64 27 10.56 87.52 31 4.02 No 59 0.35 No 24 0.76 Yes -26 0.93 Yes 44 89.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 28927728 + NR_036443 HERC2P9 1 1.46 0.13 8 6.92 75.74 34 6.46 Yes 11 0.81 Yes 0 0 No -23 0.47 No 47 47.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 28929537 + NR_036443 HERC2P9 1 1.65 0.22 14 6.91 81.7 25 5.99 Yes 12 1.5 Yes 0 0 No -24 0.91 Yes 46 90.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 89574181 + NM_001271602 HERC3 1 3.39 0.32 17 10.94 90.08 25 5.39 No 12 1.2 Yes 0 0 No -24 0.95 Yes 46 96.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 89587005 + NM_001271602 HERC3 1 0.8 0.21 10 8.24 90.95 19 4.69 No 30 1 Yes 0 0 No -19 0.58 No 52 63.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 69682885 - NM_022079 HERC4 1 0.45 0.42 23 4.24 0 21 4.58 No 20 0.98 Yes 0 0 No -36 0.72 Yes 34 72.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 69684938 - NM_022079 HERC4 1 0.1 0.11 7 -1.64 0 10 4 No 48 0.6 No 0 0 No -30 0.91 Yes 40 94.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 69699409 - NM_022079 HERC4 1 0.86 1.01 40 -1.64 74.35 28 5.83 Yes 28 0.8 Yes 0 0 No -27 0.71 Yes 43 87.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 69699434 - NM_022079 HERC4 1 0.33 0.38 25 7.32 93.59 16 6.17 Yes 3 0.84 Yes 24 0.84 Yes -28 0.66 No 42 65.54 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 69706657 - NM_022079 HERC4 1 0.28 0.25 13 2.15 0 28 7.33 Yes 15 0.87 Yes 0 0 No -36 0.86 Yes 34 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 69714803 - NM_022079 HERC4 1 0.34 0.42 22 3.2 73.85 32 6 Yes 7 0.58 No 0 0 No -27 0.68 Yes 39 63.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 69714836 - NM_022079 HERC4 1 0.38 0.47 23 9.4 90.46 34 5.83 Yes 56 1.13 Yes 0 0 No -27 0.5 No 39 49.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 69716277 - NM_022079 HERC4 1 0.09 0.11 8 0.29 63.23 66 7.7 Yes 75 0.37 No 0 0 No -32 0.89 Yes 38 82.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 69747902 - NM_022079 HERC4 1 2.1 2.08 60 9.52 82.02 36 9.34 Yes 23 1.21 Yes 35 0.8 Yes -35 0.38 No 27 50.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 69749155 - NM_022079 HERC4 1 0.21 0.21 15 9.29 81 35 6.16 Yes 47 0.34 No 0 0 No -34 0.79 Yes 36 71.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 69750007 - NM_022079 HERC4 1 2.6 2.33 60 4.46 84.12 23 3.77 No 70 0.37 No 28 0.24 Yes -28 0.44 No 47 44.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 69750067 - NM_022079 HERC4 1 2.01 1.74 58 7.3 88.08 23 5.38 No 40 1.46 Yes 0 0 No -22 0.61 No 44 84.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 69773912 - NM_022079 HERC4 1 0.67 0.56 27 9.05 92.3 35 6.08 Yes 44 1.02 Yes 0 0 No -27 0.7 Yes 43 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 69792093 - NM_022079 HERC4 1 1.01 0.56 24 7.85 86.04 21 5.61 Yes 66 0.41 No 0 0 No -28 0.38 No 42 29.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 69792623 - NM_022079 HERC4 1 0.32 0.14 8 1.1 0 28 7.57 Yes 15 1.13 Yes 0 0 No -27 0.74 Yes 43 57.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 69798290 - NM_022079 HERC4 1 0.16 0.13 8 8.68 91.07 20 5.57 Yes 7 0.37 No 0 0 No -20 0.43 No 51 56.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 69799246 - NM_022079 HERC4 1 4.31 3.64 69 2.49 74.43 39 7 Yes 26 1.72 Yes 38 0.58 Yes -38 0.86 Yes 32 86.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 69804316 - NM_022079 HERC4 1 0.52 0.56 29 -0.4 0 31 6.71 Yes 37 0.53 No 0 0 No -31 0.53 No 39 60.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 69826975 - NM_022079 HERC4 1 4.22 4.61 67 5.37 88.17 19 5.7 Yes 6 0.92 Yes 21 0.54 Yes -22 0.4 No 49 38.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 69830336 - NM_022079 HERC4 1 0.72 0.75 35 9.24 93.31 28 5.29 No 63 0.96 Yes 0 0 No -56 0.52 No 14 59.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 69830357 - NM_022079 HERC4 1 20.97 22.93 72 1.8 0 36 5.09 No 42 0.95 Yes 31 0.67 Yes -31 0.37 No 39 43.18 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 69830361 - NM_022079 HERC4 1 0.84 0.93 43 1.81 84.41 32 4.93 No 38 0.96 Yes 31 0.67 Yes -27 0.47 No 43 45.74 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 89384977 + NM_016323 HERC5 1 0.11 0.11 8 9.03 85.61 30 6.3 Yes 35 0.75 No 22 0.89 Yes -23 0.69 Yes 47 75.8 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 89393562 + NM_016323 HERC5 1 0.14 0.21 13 0.95 77.43 35 6.95 Yes 22 0.67 No 0 0 No -23 0.58 No 36 89.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 89400506 + NM_016323 HERC5 1 0.54 0.76 36 2.39 73.12 40 6.85 Yes 33 0.61 No 0 0 No -39 0.71 Yes 31 86.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 89406413 + NM_016323 HERC5 1 0.19 0.19 13 3.2 91.34 27 5.29 No 27 0.25 No 0 0 No -26 0.55 No 46 69.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 89407274 + NM_016323 HERC5 1 0.11 0.14 9 -1.75 0 17 3.05 No 50 0.09 No 0 0 No -30 0.85 Yes 40 79.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 89413179 + NM_016323 HERC5 1 0.11 0.15 10 0.6 0 35 9 Yes 22 1.4 Yes 0 0 No -28 0.64 No 36 73.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 89418038 + NM_016323 HERC5 1 0.1 0.14 9 3.62 78.15 33 6.85 Yes 20 1.03 Yes 0 0 No -32 0.92 Yes 38 75.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 89425385 + NM_016323 HERC5 1 0.09 0.13 8 -19.21 71.12 23 6.21 Yes 46 1.69 Yes 0 0 No -22 0.45 No 37 54.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 89425434 + NM_016323 HERC5 1 1.32 2.17 57 1.19 69.62 36 6.2 Yes 59 0.96 Yes 0 0 No -35 0.47 No 35 76.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 89304336 + NM_017912 HERC6 1 1.92 0.26 15 2.5 78.52 46 4.74 No 46 0.58 No 28 0.72 Yes -28 0.62 No 42 80.13 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 89304383 + NM_017912 HERC6 1 3.67 0.4 21 -2.27 0 15 4.4 No 62 0.35 No 38 0.07 Yes -49 0.44 No 21 71.26 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 89317163 + NM_017912 HERC6 1 0.59 0.15 10 1.88 73.83 23 6.52 Yes 10 0.58 No 25 0.7 Yes -22 0.75 Yes 48 87.96 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 89319259 + NM_017912 HERC6 1 0.5 0.11 7 6.8 87.04 28 5.19 No 15 0.3 No 23 0.85 Yes -23 0.85 Yes 47 85.45 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 89319548 + NM_017912 HERC6 1 3.88 1.17 47 9.67 83.18 36 6.07 Yes 17 1.52 Yes 29 0.93 Yes -29 0.88 Yes 41 93.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 89325364 + NM_017912 HERC6 1 0.38 0.13 7 4.64 84.41 25 6.16 Yes 12 0.25 No 0 0 No -24 0.9 Yes 46 89.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 56966665 + NM_014685 HERPUD1 1 0.07 0.21 13 3.59 0 19 4.47 No 6 0.98 Yes 0 0 No -18 0.82 Yes 52 75.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56969315 + NM_014685 HERPUD1 1 7.95 42.04 72 4.02 89.15 26 4.71 No 53 1.04 Yes 23 0.89 Yes -26 0.84 Yes 44 88.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 56973779 + NM_014685 HERPUD1 1 0.06 0.38 13 6.87 82.49 22 4.79 No 9 0.35 No 32 0.94 Yes -21 0.91 Yes 49 94.4 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 56973811 + NM_014685 HERPUD1 1 0.11 0.68 31 1.34 0 38 6.12 Yes 25 0.82 Yes 0 0 No -37 0.85 Yes 33 90.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56974088 + NM_014685 HERPUD1 1 0.36 2.28 54 8.6 88.44 28 5.45 No 15 0.15 No 27 0.92 Yes -27 0.8 Yes 46 72.9 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 56977041 + NM_014685 HERPUD1 1 0.04 0.29 17 -4.37 0 51 7.84 Yes 38 2.02 Yes 0 0 No -31 0.4 No 31 88.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 56977176 + NM_014685 HERPUD1 1 0.13 0.85 38 11.41 90.72 29 5.83 Yes 40 -1.33 No 28 0.8 Yes -28 0.93 Yes 42 90.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 35674013 - NM_022373 HERPUD2 1 0.91 0.36 21 6.06 88.95 22 5.28 No 49 1.58 Yes 0 0 No -57 0.46 No 49 68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 35674045 - NM_022373 HERPUD2 1 0.42 0.15 10 3.35 0 30 6.93 Yes 17 1.62 Yes 30 0.92 Yes -25 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 35675287 - NM_022373 HERPUD2 1 0.33 0.21 12 4.66 72.65 49 6.92 Yes 22 1.94 Yes 0 0 No -34 0.91 Yes 36 93.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 35709935 - NM_022373 HERPUD2 1 0.55 0.38 18 -1.88 0 28 5.26 No 52 1.71 Yes 0 0 No -27 0.61 No 35 57.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 35730392 - NM_022373 HERPUD2 1 0.33 0.21 13 7.85 96.24 28 5.29 No 52 1.3 Yes 0 0 No -27 0.57 No 21 45.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 72638118 - NM_001318825 HEXA 1 0.16 0.35 20 -5.71 73.79 30 5.44 No 26 0.49 No 0 0 No -30 0.67 Yes 40 76.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 72638470 - NM_001318825 HEXA 1 0.72 1.43 51 6.28 91.58 17 4.8 No 56 0.27 No 0 0 No -19 0.81 Yes 51 84.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 72638484 - NM_001318825 HEXA 1 0.06 0.14 9 1.4 61.98 22 4.82 No 42 0.25 No 0 0 No -21 0.74 Yes 49 65.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 72643035 - NM_001318825 HEXA 1 0.09 0.21 15 3.56 78.35 21 5.2 No 65 0.72 No 22 0.93 Yes -20 0.54 No 44 57.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 72648296 - NM_001318825 HEXA 1 0.05 0.11 8 8.55 90.02 26 5.26 No 20 1.39 Yes 0 0 No -32 0.72 Yes 46 83.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72648318 - NM_001318825 HEXA 1 0.67 1.29 46 8.76 87.46 11 6 Yes -2 1 Yes 26 0.75 Yes -26 0.83 Yes 44 80.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 73982035 + NM_000521 HEXB 1 0.15 0.14 9 11.22 90.95 35 7.77 Yes 22 0.71 No 0 0 No -34 0.64 No 36 67.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 73992858 + NM_000521 HEXB 1 0.12 0.14 8 4.18 78.22 26 6.33 Yes 13 0.72 No 0 0 No -35 0.54 No 35 53.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 73996577 + NM_000521 HEXB 1 1.38 1.64 52 7.72 90.92 28 5.29 No 70 1.3 Yes 0 0 No -27 0.74 Yes 39 63.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 73998317 + NM_000521 HEXB 1 0.27 0.32 20 4.54 88.81 26 5.06 No 37 0.3 No 0 0 No -25 0.68 Yes 47 58.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 74014584 + NM_000521 HEXB 1 0.29 0.28 16 8.59 80.99 39 5.04 No 15 0.86 Yes 32 0.8 Yes -35 0.42 No 42 39.4 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 74014733 + NM_000521 HEXB 1 0.42 0.39 18 6.49 74.2 26 6.49 Yes 13 1.27 Yes 25 0.79 Yes -32 0.55 No 45 77.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 80377921 + NM_001330542 HEXDC 1 0.76 0.25 18 7.88 78.31 21 5.79 Yes 8 0.35 No 0 0 No -20 0.85 Yes 50 82.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80382294 + NM_001330542 HEXDC 1 4.39 1.6 55 10.07 73.47 35 5.83 Yes 36 2.36 Yes 27 0.47 Yes -34 0.64 No 22 52.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 80385905 + NM_001330542 HEXDC 1 1.89 0.58 28 7.76 91.86 27 5.2 No 67 0.91 Yes 26 0.79 Yes -26 0.75 Yes 44 71.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80386216 + NM_001330542 HEXDC 1 0.34 0.1 7 0.91 56.17 30 7.03 Yes 17 1.05 Yes 0 0 No -29 0.42 No 41 65.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80388863 + NM_001330542 HEXDC 1 0.24 0.11 7 9.31 92.96 14 5.14 No 62 0.85 Yes 0 0 No -27 0.75 Yes 43 68.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 80395829 + NM_001330542 HEXDC 1 0.53 0.15 9 4.89 84.97 20 4.9 No 7 0.77 Yes 0 0 No -19 0.91 Yes 51 93.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80397992 + NM_001330542 HEXDC 1 1.19 0.17 11 6.92 84.6 11 4.89 No -2 0.75 No 0 0 No -21 0.6 No 60 63.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 80398348 + NM_001330542 HEXDC 1 4.51 0.78 37 2.23 72.29 33 5.88 Yes 1 0.38 No 32 0.48 Yes -32 0.77 Yes 38 53.94 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 80399093 + NM_001330542 HEXDC 1 0.61 0.18 9 1.45 68.53 25 5.92 Yes 58 -0.61 No 0 0 No -25 0.86 Yes 45 62.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80399112 + NM_001330542 HEXDC 1 0.76 0.19 12 5.21 79.8 18 4.89 No 5 0.03 No 0 0 No -17 0.42 No 44 47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 80399619 + NM_001330542 HEXDC 1 2.05 0.67 31 3.62 66.74 25 6.8 Yes 12 0.28 No 0 0 No -25 0.8 Yes 45 67.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80400083 + NM_001330542 HEXDC 1 0.59 0.19 12 1.43 81.7 12 3.85 No 38 0.8 Yes 0 0 No -39 0.48 No 48 33.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 43240113 + NM_001303443 HEXIM2 1 3.7 0.6 27 5.54 73.98 23 3.75 No 27 1.99 Yes 25 0.73 Yes -22 0.67 Yes 48 75.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 43240113 + NM_001303443 HEXIM2 1 2.57 0.43 20 5.54 73.98 23 3.75 No 27 1.99 Yes 25 0.73 Yes -22 0.67 Yes 48 75.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145193931 + NM_016458 HGH1 1 0.58 0.65 31 6.39 81.16 29 5.39 No 16 1.25 Yes 0 0 No -28 0.95 Yes 42 88.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79651842 + NM_004712 HGS 1 0.95 0.69 36 5.84 84.58 23 4.44 No 52 -1.04 No 0 0 No -26 0.71 Yes 48 49.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 79655781 + NM_004712 HGS 1 0.19 0.25 15 3.87 82.82 24 5.2 No 58 2.04 Yes 23 0.9 Yes -23 0.88 Yes 47 80.44 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79660514 + NM_004712 HGS 1 0.11 0.14 8 1.87 73.51 20 5.1 No -4 1 Yes 26 0.89 Yes -19 0.82 Yes 51 69.03 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 79661285 + NM_004712 HGS 1 0.85 0.82 35 10.82 84.53 37 6.56 Yes 24 0.75 No 0 0 No -22 0.77 Yes 34 65.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 79661989 + NM_004712 HGS 1 0.26 0.22 16 -10.42 55.78 22 6.63 Yes 43 1.61 Yes 0 0 No -55 0.36 No 23 18.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 79662968 + NM_004712 HGS 1 0.18 0.21 13 9.89 85.54 27 6.74 Yes -2 1.66 Yes 26 0.81 Yes -26 0.53 No 44 71.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 79668038 + NM_004712 HGS 1 0.27 0.33 21 7.74 83.03 33 5.04 No 37 -0.52 No 24 0.93 Yes -22 0.7 Yes 48 52.16 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 79668244 + NM_004712 HGS 1 0.1 0.13 8 3.13 72.51 31 5.45 No 68 -3.71 No 24 0.55 Yes -23 0.58 No 47 60.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79668273 + NM_004712 HGS 1 2.19 2.31 60 7.03 85.15 32 6.16 Yes 40 -1.31 No 24 0.55 Yes -31 0.6 No 39 55.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79668567 + NM_004712 HGS 1 0.57 0.54 29 4.01 77.82 36 5.43 No NA NA NA 25 0.63 Yes -25 0.62 No 45 53.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 43002481 + NM_152419 HGSNAT 1 7.44 1.72 51 9.52 78.96 32 6 Yes 19 0.6 No 0 0 No -27 0.52 No 39 72.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 43014870 + NM_152419 HGSNAT 1 0.24 0.1 7 10.16 86.15 28 6.21 Yes 15 0.9 Yes 0 0 No -27 0.92 Yes 43 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 43051572 + NM_152419 HGSNAT 1 3.57 0.75 32 8.61 74.67 73 7.04 Yes 50 1.03 Yes 25 0.66 Yes -25 0.56 No 45 84.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 210672441 + NM_001170564 HHAT 1 3.68 0.22 12 10.88 92.58 21 5.62 Yes 35 0.04 No 0 0 No -25 0.77 Yes 45 82.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 210804340 + NM_001170564 HHAT 1 2.79 0.26 15 10.81 99.37 34 6.12 Yes 21 0.76 No 28 0.47 Yes -27 0.66 Yes 43 78.64 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 210819784 + NM_001170564 HHAT 1 2.41 0.22 11 8.33 85.96 32 6.3 Yes 19 1.78 Yes 0 0 No -31 0.96 Yes 39 97.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 70832615 + NM_001036645 HHLA3 1 32.14 10.68 72 7.5 90.59 23 6.56 Yes 75 0.38 No 23 0.45 Yes -23 0.52 No 47 49.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 70833304 + NM_001036645 HHLA3 1 2.16 0.75 35 0.97 0 23 6 Yes 69 1.2 Yes 0 0 No -22 0.73 Yes 48 79.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 27565488 - NM_152740 HIBADH 1 0.14 0.14 9 8.41 95.08 23 6.81 Yes 17 -1.65 No 0 0 No -29 0.72 Yes 41 82.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 27566092 - NM_152740 HIBADH 1 0.28 0.26 15 8.15 94.1 22 4.42 No 25 0.59 No 0 0 No -21 0.95 Yes 49 94.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 27581375 - NM_152740 HIBADH 1 7.67 2.72 62 6.87 76.74 40 7.5 Yes 63 0.48 No 0 0 No -39 0.8 Yes 31 77.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 27670351 - NM_152740 HIBADH 1 0.14 0.13 8 9.53 87.56 33 11.4 Yes 44 0.79 Yes 0 0 No -32 0.84 Yes 38 84.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 27672046 - NM_152740 HIBADH 1 0.4 0.28 14 3.09 85.73 23 4.86 No 33 0.71 No 0 0 No -22 0.66 No 48 48.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 27672061 - NM_152740 HIBADH 1 0.15 0.11 7 -2.54 0 31 7.94 Yes 18 0.71 No 26 0.38 Yes -39 0.43 No 40 45.81 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 27676357 - NM_152740 HIBADH 1 0.3 0.22 13 8.26 89.02 27 6.55 Yes 14 1.17 Yes 0 0 No -26 0.56 No 44 68.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 27686901 - NM_152740 HIBADH 1 0.35 0.26 17 4.46 83.11 22 4.94 No 74 -6.52 No 0 0 No -30 0.69 Yes 46 83.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 27688264 - NM_152740 HIBADH 1 1.17 0.76 30 6.53 86.87 22 4.8 No 74 0.02 No 0 0 No -21 0.58 No 49 55.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 27689243 - NM_152740 HIBADH 1 1.26 0.35 20 3.49 0 18 4.33 No 60 -2.26 No 0 0 No -17 0.67 Yes 53 27.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 191069529 - NM_014362 HIBCH 1 0.14 0.19 8 5.54 84.56 27 6.17 Yes 14 1.16 Yes 26 0.9 Yes -26 0.83 Yes 44 90.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 191072600 - NM_014362 HIBCH 1 0.37 0.49 26 1.43 0 28 5.9 Yes 60 0.47 No 0 0 No -45 0.48 No 25 70.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 191085210 - NM_014362 HIBCH 1 0.14 0.21 13 8.42 92.04 36 6.45 Yes 23 1.35 Yes 23 0.8 Yes -32 0.49 No 35 69.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 191107367 - NM_014362 HIBCH 1 0.12 0.17 9 7.9 86.79 45 6.3 Yes 32 1.38 Yes 0 0 No -28 0.5 No 42 82.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 191109031 - NM_014362 HIBCH 1 0.27 0.39 21 4.8 80.1 28 4.44 No 52 0.69 No 0 0 No -27 0.47 No 43 58.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191109478 - NM_014362 HIBCH 1 0.33 0.44 21 10.9 78.83 42 6.63 Yes 29 0.71 No 0 0 No -28 0.81 Yes 42 66.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 191115113 - NM_014362 HIBCH 1 0.37 0.47 21 7.92 85.19 22 6.02 Yes 9 1.32 Yes 0 0 No -21 0.36 No 49 53.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191125238 - NM_014362 HIBCH 1 1.96 2.15 63 8.56 73.31 22 6.02 Yes 69 1.01 Yes 32 0.58 Yes -32 0.88 Yes 38 83.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 191148450 - NM_014362 HIBCH 1 0.44 0.33 19 11.55 95.88 28 6.29 Yes 54 0.46 No 0 0 No -28 0.81 Yes 42 87.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191149103 - NM_014362 HIBCH 1 1.34 0.93 43 10.32 95.65 32 5.57 Yes 39 0.83 Yes 0 0 No -32 0.42 No 55 37.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191151205 - NM_014362 HIBCH 1 0.22 0.14 8 7.79 83.91 25 5.92 Yes 12 1.11 Yes 0 0 No -24 0.74 Yes 46 75.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 191152380 - NM_014362 HIBCH 1 0.18 0.15 8 3.72 67.66 44 6.39 Yes 48 0.26 No 24 0.72 Yes -22 0.54 No 48 65.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 191159354 - NM_014362 HIBCH 1 0.09 0.17 12 -3.12 62.73 56 6.51 Yes 43 0.4 No 0 0 No -30 0.78 Yes 40 70.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191168102 - NM_014362 HIBCH 1 0.25 0.29 19 7.94 77.13 24 6.86 Yes 11 0.98 Yes 0 0 No -23 0.96 Yes 47 96.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 62188824 + NM_001243084 HIF1A 1 0.19 0.54 30 10.11 85.05 23 6.27 Yes 10 1.34 Yes 0 0 No -29 0.54 No 41 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 62190865 + NM_001243084 HIF1A 1 0.04 0.13 7 9.9 88.51 49 8.05 Yes 36 1.35 Yes 0 0 No -48 0.86 Yes 22 87.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 62190914 + NM_001243084 HIF1A 1 0.38 1.06 45 8.89 80.61 27 5.54 No 14 0.7 No 0 0 No -26 0.65 No 44 79.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 62200831 + NM_001243084 HIF1A 1 0.19 0.54 29 1.63 0 18 5.07 No 76 0.66 No 26 0.7 Yes -24 0.78 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 62203650 + NM_001243084 HIF1A 1 0.05 0.18 8 8.33 74.82 23 6.11 Yes 55 0.84 Yes 0 0 No -33 0.58 No 40 48.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 62207260 + NM_001243084 HIF1A 1 0.07 0.18 11 3.85 72.99 23 5.74 Yes 45 0.53 No 26 0.57 Yes -26 0.38 No 44 62.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 62209827 + NM_001243084 HIF1A 1 0.07 0.17 10 5.72 90.92 28 5.29 No 64 -2.55 No 0 0 No -27 0.74 Yes 43 73.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 102306371 + NM_017902 HIF1AN 1 0.07 0.11 8 11.86 94.25 31 6.34 Yes 60 0.5 No 0 0 No -27 0.53 No 43 75.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 42826829 - NM_001099668 HIGD1A 1 0.07 0.31 18 1.42 58.81 15 5.51 No 51 0.24 No 26 0.78 Yes -26 0.8 Yes 16 32.71 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 42828457 - NM_001099668 HIGD1A 1 0.06 0.31 18 8.61 89.04 34 8.51 Yes 21 1.58 Yes 0 0 No -33 0.82 Yes 37 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 42830374 - NM_001099668 HIGD1A 1 0.73 4.06 69 11.09 85.31 36 7.3 Yes 12 1.41 Yes 0 0 No -24 0.89 Yes 46 94.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 175816311 + NM_138820 HIGD2A 1 0.03 0.19 11 6.53 82.95 31 6.92 Yes 18 0.69 No 22 0.59 Yes -30 0.92 Yes 40 80.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 86029977 + NM_001322407 HIKESHI 1 0.85 2.4 68 10.53 86.79 23 4.79 No 69 0.53 No 0 0 No -28 0.79 Yes 42 79.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 86030003 + NM_001322407 HIKESHI 1 0.13 0.4 19 7.77 92.81 15 5.38 No 2 0.9 Yes 0 0 No -26 0.32 No 16 73.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 86033050 + NM_001322407 HIKESHI 1 0.04 0.11 7 3.99 83.86 27 5.48 No 14 0.65 No 0 0 No -26 0.88 Yes 44 93.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 86037554 + NM_001322407 HIKESHI 1 1.47 4.17 68 7.9 91.43 29 5.83 Yes -3 0.13 No 28 0.52 Yes -32 0.52 No 38 56.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 86039321 + NM_001322407 HIKESHI 1 0.4 1.19 50 5.05 84.41 27 6.78 Yes 58 0.91 Yes 0 0 No -26 0.91 Yes 44 87.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 86039494 + NM_001322407 HIKESHI 1 0.07 0.22 11 3.52 84.41 29 6.32 Yes 16 1.92 Yes 0 0 No -28 0.92 Yes 42 94.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 86055400 + NM_001322407 HIKESHI 1 0.05 0.14 9 8.18 96.76 46 7.98 Yes 33 1.19 Yes 0 0 No -29 0.65 No 41 81.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 86055704 + NM_001322407 HIKESHI 1 0.68 1.67 60 8.82 91.19 20 5.75 Yes 57 1.2 Yes 0 0 No -30 0.85 Yes 40 87.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 86056135 + NM_001322407 HIKESHI 1 0.4 0.9 34 8.81 78.44 36 8.53 Yes 23 1.4 Yes 27 0.61 Yes -35 0.88 Yes 35 93.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 128097387 + NM_013332 HILPDA 1 0.39 0.1 7 4.75 76.75 24 6.56 Yes 11 2.38 Yes 0 0 No -23 0.85 Yes 47 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118992492 + NM_198971 HINFP 1 11.87 1.13 40 4.75 77.22 30 9.2 Yes 17 1.33 Yes 29 0.9 Yes -29 0.85 Yes 41 84.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 118994277 + NM_198971 HINFP 1 56.39 5.44 70 10.01 98.73 35 7.01 Yes 22 0.52 No 0 0 No -34 0.9 Yes 36 91.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 118999060 + NM_198971 HINFP 1 2.36 0.79 38 6.03 93.18 28 4.45 No 3 1 Yes 0 0 No -27 0.6 No 43 55.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 119001823 + NM_198971 HINFP 1 2.21 0.6 32 7.79 96.06 26 7.93 Yes 13 0.13 No 25 0.63 Yes -26 0.36 No 27 29.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 119002952 + NM_198971 HINFP 1 12.02 3.92 67 11.57 85.79 17 4.38 No 4 0.5 No 25 0.61 Yes -29 0.65 No 41 60.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 119004653 + NM_198971 HINFP 1 1.12 0.4 23 1.82 69.43 45 6.23 Yes 29 1.2 Yes 0 0 No -44 0.65 No 26 80.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 130495326 - NM_005340 HINT1 1 0.01 0.11 7 -0.58 68.57 21 5.32 No 36 0.76 No 23 0.89 Yes -20 0.65 No 50 79.35 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 130496538 - NM_005340 HINT1 1 0.11 1.64 49 4.07 83.58 24 4.9 No 11 0.8 Yes 23 0.95 Yes -23 0.93 Yes 47 92.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 130498171 - NM_005340 HINT1 1 2.07 27.83 72 7.77 80.89 30 4.44 No 67 1.59 Yes 30 0.9 Yes -30 0.81 Yes 40 88.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 130498197 - NM_005340 HINT1 1 0.09 1.15 45 4.79 81.02 16 4.97 No 41 1.59 Yes 21 0.61 Yes -53 0.41 No 17 82.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 130499186 - NM_005340 HINT1 1 0.01 0.18 11 10.31 93.06 36 6 Yes 54 0.47 No 0 0 No -35 0.6 No 35 38.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 35813154 - NM_032593 HINT2 1 3.36 5.06 69 2.66 68.93 82 8.5 Yes 4 1.96 Yes 19 0.92 Yes -25 0.51 No 16 59.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 35813329 - NM_032593 HINT2 1 0.12 0.21 11 2.71 0 12 4 No 27 0.6 No 0 0 No -30 0.35 No 40 59.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 35813365 - NM_032593 HINT2 1 0.76 1.46 49 1.16 64.1 31 5.48 No NA NA NA 24 0.6 Yes -24 0.74 Yes 46 52.05 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 35813517 - NM_032593 HINT2 1 0.85 1.31 54 7.3 81.49 15 6.24 Yes 48 1.23 Yes 32 0.31 Yes -37 0.83 Yes 38 56.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 123321185 + NM_003959 HIP1R 1 0.97 0.14 9 2.63 74.52 26 5.17 No 4 0.41 No 0 0 No -25 0.76 Yes 45 52.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 123334648 + NM_003959 HIP1R 1 0.73 0.15 9 0.76 68.15 28 6.51 Yes 15 1.39 Yes 0 0 No -27 0.89 Yes 43 83.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123337523 + NM_003959 HIP1R 1 0.85 0.18 11 9.88 84.88 44 7.07 Yes 65 0.01 No 0 0 No -34 0.76 Yes 36 74.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123341175 + NM_003959 HIP1R 1 1.18 0.25 15 1.84 0 24 5.83 Yes 11 1.21 Yes 0 0 No -23 0.91 Yes 47 94.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 114505256 + NM_181358 HIPK1 1 0.19 0.19 13 9.17 80.43 34 9.35 Yes 21 1.35 Yes 0 0 No -33 0.44 No 37 70.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 114508754 + NM_181358 HIPK1 1 14.81 8.99 71 6.57 91.42 43 6.01 Yes 58 -3.58 No 27 0.42 Yes -30 0.58 No 40 61.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 114512658 + NM_181358 HIPK1 1 0.33 0.33 20 5.54 86.98 17 4.89 No 4 2.11 Yes 0 0 No -24 0.67 Yes 46 53.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 114514520 + NM_181358 HIPK1 1 4.81 2.97 61 8.63 87.11 27 6.02 Yes 65 -5.29 No 0 0 No -26 0.8 Yes 44 83.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 139274125 - NM_022740 HIPK2 1 0.16 0.14 9 5.9 75.26 66 6.23 Yes 6 0.87 Yes 0 0 No -25 0.53 No 45 44.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 139288967 - NM_022740 HIPK2 1 5.15 6.36 71 6.24 84.11 29 6.91 Yes 61 -2.79 No 0 0 No -28 0.93 Yes 42 86.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 139299159 - NM_022740 HIPK2 1 74.47 55.26 72 4.57 76.39 25 6.62 Yes 12 1.3 Yes 24 0.8 Yes -24 0.79 Yes 46 83.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 139305291 - NM_022740 HIPK2 1 0.45 0.79 36 5.07 80.16 25 5.04 No 61 0.59 No 0 0 No -24 0.52 No 49 51.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 139354298 - NM_022740 HIPK2 1 0.07 0.11 7 6.84 87.64 22 5.5 No 9 1.47 Yes 0 0 No -21 0.89 Yes 49 92.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 139406332 - NM_022740 HIPK2 1 0.1 0.11 7 4.89 76.59 46 6.84 Yes 8 1.14 Yes 0 0 No -20 0.54 No 50 57.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 139407536 - NM_022740 HIPK2 1 0.37 0.47 21 6.13 81.51 24 6.08 Yes 48 1.37 Yes 0 0 No -24 0.84 Yes 46 64.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 139425908 - NM_022740 HIPK2 1 0.16 0.15 10 6.4 85.78 44 6.35 Yes 15 0.54 No 0 0 No -27 0.8 Yes 43 71.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 139441645 - NM_022740 HIPK2 1 0.89 0.74 38 7.19 87.98 44 6.75 Yes 7 1.78 Yes 0 0 No -35 0.92 Yes 35 95.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 139441838 - NM_022740 HIPK2 1 1.36 1.13 44 8.12 83.38 19 6.08 Yes 6 1.47 Yes 0 0 No -24 0.62 No 46 67.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 139455059 - NM_022740 HIPK2 1 0.31 0.25 15 3.6 69.33 61 9.36 Yes 48 1.7 Yes 0 0 No -60 0.34 No 10 76.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 139470445 - NM_022740 HIPK2 1 0.2 0.17 10 8.52 98.14 19 5 No 21 0.16 No 0 0 No -21 0.6 No 49 58.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 33327417 + NM_001278162 HIPK3 1 0.39 0.4 25 0.13 0 32 8.73 Yes 19 1.13 Yes 0 0 No -31 0.68 Yes 39 79.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 33339796 + NM_001278162 HIPK3 1 0.23 0.19 11 7.49 86.87 28 6.56 Yes 57 0.97 Yes 0 0 No -28 0.81 Yes 42 87.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 33357203 + NM_001278162 HIPK3 1 0.28 0.28 18 10.27 92.17 16 3.95 No 3 0.12 No 25 0.86 Yes -25 0.68 Yes 45 80.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 33369711 + NM_001278162 HIPK3 1 46.29 29.78 72 8.78 85.41 27 5.39 No 14 1.5 Yes 26 0.95 Yes -26 0.87 Yes 44 89.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 33370243 + NM_001278162 HIPK3 1 0.49 0.35 17 1 79.12 23 4.93 No -3 0.62 No 0 0 No -22 0.77 Yes 48 61.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 33371019 + NM_001278162 HIPK3 1 0.19 0.21 11 2.59 0 41 6.48 Yes 72 1.32 Yes 0 0 No -41 0.45 No 30 49.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 19338780 - NM_003325 HIRA 1 0.81 0.53 26 5.63 77.03 33 4.89 No 74 0.18 No 0 0 No -32 0.44 No 38 50.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 19343385 - NM_003325 HIRA 1 0.36 0.35 19 -3.81 0 24 6.08 Yes 32 0.32 No 0 0 No -23 0.9 Yes 47 77.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 19365515 - NM_003325 HIRA 1 0.12 0.13 8 7.7 78.84 53 7.55 Yes 40 0.84 Yes 0 0 No -52 0.37 No 18 49.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 19375490 - NM_003325 HIRA 1 0.31 0.29 17 8.83 81.15 29 7.28 Yes 75 0.19 No 0 0 No -29 0.79 Yes 42 68.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 19377381 - NM_003325 HIRA 1 0.43 0.4 23 11.75 92.63 21 7.15 Yes 8 0.89 Yes 0 0 No -35 0.42 No 50 73.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 19384396 - NM_003325 HIRA 1 0.11 0.1 7 1.17 59.86 29 6.47 Yes 67 -4.73 No 0 0 No -28 0.89 Yes 42 79.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 19386716 - NM_003325 HIRA 1 0.89 0.6 28 5.02 74.48 26 6.83 Yes 13 1.18 Yes 0 0 No -25 0.92 Yes 45 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19393055 - NM_003325 HIRA 1 1.95 1.36 51 6.76 78.31 31 7.42 Yes 71 0.89 Yes 0 0 No -30 0.93 Yes 40 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19395927 - NM_003325 HIRA 1 0.26 0.11 8 -3.47 0 26 5.24 No 69 -3.96 No 0 0 No -25 0.68 Yes 45 63.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 19395931 - NM_003325 HIRA 1 1.09 0.6 30 4.6 70.38 22 4.9 No 65 -3.95 No 0 0 No -21 0.67 Yes 49 67.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 19396112 - NM_003325 HIRA 1 1.19 0.79 31 3.69 0 31 6.06 Yes 18 0.88 Yes 0 0 No -30 0.7 Yes 40 81.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 26159085 + NM_138720 HIST1H2BD 1 3.78 1.86 55 10.23 85.44 31 5.48 No 18 0.22 No 0 0 No -23 0.64 No 47 78.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 26159505 + NM_138720 HIST1H2BD 1 0.53 0.28 16 9.3 92.54 44 6.16 Yes 57 1.52 Yes 0 0 No -39 0.87 Yes 31 95.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 26164025 + NM_138720 HIST1H2BD 1 0.9 0.36 21 6.45 84.34 24 5.99 Yes 34 0.62 No 0 0 No -23 0.79 Yes 47 62.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 12017607 + NM_002114 HIVEP1 1 0.17 0.18 12 7.97 87.55 15 5.1 No 25 1.05 Yes 0 0 No -19 0.48 No 39 62.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 12020480 + NM_002114 HIVEP1 1 1.2 1.14 42 11.82 92.88 30 5.99 Yes 49 0.95 Yes 29 0.43 Yes -21 0.52 No 41 66.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 12028399 + NM_002114 HIVEP1 1 0.15 0.18 8 8.38 87.69 26 4.6 No 75 1.97 Yes 0 0 No -25 0.83 Yes 45 78.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 12037958 + NM_002114 HIVEP1 1 2.94 3 67 11.6 92.17 35 6.43 Yes 22 1.15 Yes 25 0.77 Yes -34 0.57 No 45 49.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 12051614 + NM_002114 HIVEP1 1 0.32 0.33 20 6.8 84.91 24 5.98 Yes 46 0.57 No 0 0 No -24 0.65 No 46 74.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 12055760 + NM_002114 HIVEP1 1 0.34 0.39 19 5.7 71.91 39 5.23 No 57 0.23 No 0 0 No -38 0.63 No 32 79.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 12077725 + NM_002114 HIVEP1 1 0.4 0.43 24 7.88 82.9 25 5.23 No 39 0.45 No 0 0 No -24 0.7 Yes 46 72.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 12089852 + NM_002114 HIVEP1 1 1 0.97 35 10.46 86.44 27 5.39 No 14 0.98 Yes 0 0 No -26 0.87 Yes 44 92.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 12139577 + NM_002114 HIVEP1 1 0.43 0.31 15 5.16 79.53 31 6.08 Yes 18 0.49 No 0 0 No -30 0.93 Yes 40 96.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 143100105 - NM_006734 HIVEP2 1 0.36 0.14 8 8.52 92.63 25 6.52 Yes 44 0.2 No 0 0 No -25 0.59 No 45 49.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 143100730 - NM_006734 HIVEP2 1 6.4 2.43 62 7.29 91.74 15 5.13 No 2 1.63 Yes 24 0.84 Yes -24 0.77 Yes 11 56.86 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 143100748 - NM_006734 HIVEP2 1 0.46 0.17 11 0.97 0 48 5.62 Yes 61 -1.8 No 24 0.84 Yes -41 0.92 Yes 29 91.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 143141238 - NM_006734 HIVEP2 1 4.12 1.21 45 10.42 91.43 28 6.43 Yes 37 0.36 No 0 0 No -27 0.55 No 43 62.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 143144391 - NM_006734 HIVEP2 1 1.01 0.22 12 5.59 87.74 31 6.12 Yes 18 0.55 No 0 0 No -25 0.79 Yes 45 87.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 41976935 - NM_024503 HIVEP3 1 25.28 3.54 68 4.93 79.53 40 6.52 Yes 27 1.85 Yes 25 0.92 Yes -28 0.67 Yes 42 63.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 42003248 - NM_024503 HIVEP3 1 2.46 0.35 20 12.85 87.69 41 5.94 Yes 53 0.87 Yes 0 0 No -27 0.51 No 43 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 42009663 - NM_024503 HIVEP3 1 0.85 0.14 7 4.6 86.25 21 6.03 Yes 8 0.38 No 0 0 No -27 0.65 No 43 77.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 42009724 - NM_024503 HIVEP3 1 2.38 0.28 16 6.24 83.91 26 5.49 No 20 0.62 No 0 0 No -26 0.52 No 44 50.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 42022827 - NM_024503 HIVEP3 1 8.25 1.36 47 5.3 72.28 44 7.4 Yes 17 -2.61 No 0 0 No -21 0.78 Yes 49 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 42050987 - NM_024503 HIVEP3 1 3.04 0.64 26 -5.92 64.55 62 8.48 Yes 49 2.02 Yes 0 0 No -61 0.86 Yes 61 15.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 234758539 - NM_018410 HJURP 1 0.41 0.22 12 -8.83 0 26 7.17 Yes 13 0.7 No 20 0.38 Yes -25 0.76 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 75106620 + NM_000189 HK2 1 0.19 0.13 7 7.37 84.49 35 6.57 Yes 60 0.18 No 0 0 No -34 0.62 No 36 70.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 75110098 + NM_000189 HK2 1 0.14 0.11 8 9.82 90.59 25 8.17 Yes 0 1.59 Yes 0 0 No -24 0.97 Yes 46 97.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 37826101 + NM_181786 HKR1 1 6.54 1.03 43 7.65 91.68 20 5.1 No 7 0.97 Yes 19 0.77 Yes -19 0.77 Yes 51 83.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 37848797 + NM_181786 HKR1 1 0.77 0.18 12 8.46 87.06 68 6.54 Yes 50 1.27 Yes 0 0 No -32 0.56 No 38 58.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 37848863 + NM_181786 HKR1 1 14.1 3.35 68 8.42 81.72 35 6 Yes 68 0.51 No 29 0.3 Yes -32 0.5 No 38 43.08 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 37850327 + NM_181786 HKR1 1 7.73 1.94 53 12.05 88.27 18 5.66 Yes 76 0.8 Yes 27 0.58 Yes -27 0.52 No 43 60.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 37853007 + NM_181786 HKR1 1 22.38 5.4 71 6.72 91.13 19 6.85 Yes 6 0.71 No 18 0.51 Yes -30 0.59 No 40 74.28 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr21 38129282 - NM_001242784 HLCS 1 5.14 1.17 49 8.26 92.78 48 5.86 Yes 74 1.57 Yes 0 0 No -37 0.34 No 32 54.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 38227835 - NM_001242784 HLCS 1 2.8 0.47 27 12.22 88.27 32 9.11 Yes 19 2.08 Yes 0 0 No -31 0.74 Yes 39 91.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 38235088 - NM_001242784 HLCS 1 0.69 0.11 8 14.6 92.42 36 5.92 Yes 57 1.31 Yes 0 0 No -28 0.75 Yes 42 78.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 38264810 - NM_001242784 HLCS 1 3.47 0.64 34 14.16 90.76 22 6.48 Yes 53 0.93 Yes 0 0 No -21 0.52 No 46 61.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 38272941 - NM_001242784 HLCS 1 3.58 0.88 35 9.24 95.26 33 5.98 Yes 48 1.55 Yes 0 0 No -29 0.48 No 38 66.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 38282839 - NM_001242784 HLCS 1 1.06 0.24 15 10.09 94.38 32 5.88 Yes 53 -1.69 No 0 0 No -31 0.63 No 39 55.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 148759468 - NM_001318935 HLTF 1 18.11 10.58 72 5.69 80.93 43 6.37 Yes 3 0.93 Yes 30 0.57 Yes -28 0.72 Yes 42 56.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 148769932 - NM_001318935 HLTF 1 1.26 0.69 28 10.62 93.23 29 8.37 Yes 51 1.86 Yes 28 0.8 Yes -28 0.82 Yes 42 77.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 148771330 - NM_001318935 HLTF 1 0.47 0.33 14 4.4 83.65 35 5.78 Yes 44 -3.92 No 0 0 No -30 0.65 No 40 73.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 148777592 - NM_001318935 HLTF 1 30.45 10.13 72 7.81 92.18 26 4.77 No 66 0.45 No 23 0.79 Yes -26 0.67 Yes 44 65.12 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 148801523 - NM_001318935 HLTF 1 0.4 0.35 18 12.9 90.97 36 6.86 Yes 23 1.54 Yes 35 0.88 Yes -35 0.91 Yes 35 94.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 30115724 + NM_030789 HM13 1 0.41 1.14 46 -0.24 80.51 32 7.68 Yes 19 1.79 Yes 31 0.95 Yes -31 0.88 Yes 39 95.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 30130230 + NM_030789 HM13 1 0.04 0.15 11 11.84 87.94 21 6.07 Yes 8 2.45 Yes 0 0 No -24 0.61 No 50 70.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 30136479 + NM_030789 HM13 1 0.08 0.25 13 10.54 88.05 31 5.8 Yes 42 0.76 No 0 0 No -30 0.88 Yes 40 87.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30136767 + NM_030789 HM13 1 0.03 0.13 8 8.3 88.94 25 5.24 No 21 0.44 No 24 0.78 Yes -24 0.52 No 48 58.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 30136833 + NM_030789 HM13 1 0.05 0.11 8 -2.18 75.09 22 6.07 Yes 9 1.24 Yes 28 0.44 Yes -21 0.92 Yes 49 93.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 30138104 + NM_030789 HM13 1 0.26 0.51 24 7.65 89.18 30 7.47 Yes 13 0.32 No 0 0 No -25 0.79 Yes 45 83.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30138370 + NM_030789 HM13 1 0.06 0.11 7 4.26 81 20 4.89 No 53 0.93 Yes 0 0 No -26 0.41 No 51 69.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 30142562 + NM_030789 HM13 1 0.07 0.14 9 6.45 88.75 17 4.8 No 31 2.03 Yes 0 0 No -43 0.51 No 27 77.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 30147245 + NM_030789 HM13 1 0.08 0.19 9 10.26 85.61 34 5.46 No -2 0.97 Yes 0 0 No -26 0.34 No 44 61.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 30150215 + NM_030789 HM13 1 0.32 0.99 37 4.89 81.18 21 4.88 No 37 0.46 No 20 0.96 Yes -20 0.94 Yes 50 93.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 28749276 + NR_136757 HMBOX1 1 0.95 0.32 20 4.85 71.71 62 8.11 Yes 73 -1.79 No 30 0.69 Yes -30 0.62 No 40 78.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 28765383 + NR_136757 HMBOX1 1 1.11 0.38 23 1.86 84.41 35 11.53 Yes 22 1.81 Yes 0 0 No -34 0.84 Yes 36 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28765388 + NR_136757 HMBOX1 1 0.5 0.18 13 -1.9 0 40 11.75 Yes 27 1.8 Yes 0 0 No -39 0.81 Yes 31 93.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28782156 + NR_136757 HMBOX1 1 5.09 1.69 52 2.44 0 37 6.93 Yes 24 0.57 No 26 0.32 Yes -26 0.54 No 40 53.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 28866939 + NR_136757 HMBOX1 1 1.04 0.65 31 8.26 95.84 21 5.2 No 68 1.64 Yes 0 0 No -20 0.73 Yes 50 84.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28867200 + NR_136757 HMBOX1 1 0.27 0.14 9 6.81 83.6 60 8.06 Yes 47 1.62 Yes 23 0.89 Yes -23 0.39 No 47 52.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 28868890 + NR_136757 HMBOX1 1 2.71 1.74 57 7.43 92.6 24 4.9 No 11 1.22 Yes 0 0 No -23 0.91 Yes 47 93.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28900155 + NR_136757 HMBOX1 1 0.22 0.11 8 5.46 83.79 38 7.37 Yes 2 -2.04 No 29 0.37 Yes -28 0.54 No 42 67.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 28903708 + NR_136757 HMBOX1 1 7.34 3.32 65 6.45 83.15 28 5.24 No 4 0.55 No 0 0 No -27 0.83 Yes 43 80.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 28906470 + NR_136757 HMBOX1 1 0.95 0.1 7 3.61 80.54 30 5.65 Yes 75 0.38 No 25 0.77 Yes -25 0.8 Yes 45 94.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 28906470 + NR_136757 HMBOX1 1 270.75 24.57 72 3.61 80.54 30 5.65 Yes 75 0.38 No 25 0.77 Yes -25 0.8 Yes 45 94.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 28906476 + NR_136757 HMBOX1 1 54.71 4.99 72 -6.22 0 10 3.87 No 30 0.26 No 0 0 No -31 0.79 Yes 39 93.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 118959255 + NM_001024382 HMBS 1 0.14 0.17 9 -1.93 64.45 22 4.69 No 62 -2.95 No 0 0 No -21 0.91 Yes 49 93.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 118959809 + NM_001024382 HMBS 1 0.19 0.19 10 6.12 85.97 21 5.2 No 19 1.55 Yes 20 0.79 Yes -20 0.39 No 35 54.42 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 129007678 + NM_001006109 HMCES 1 0.3 0.4 20 6.9 73.24 20 4.5 No 1 0.57 No 23 0.93 Yes -25 0.4 No 51 65.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 129017200 + NM_001006109 HMCES 1 0.09 0.11 8 4.33 0 30 6.77 Yes 17 1.23 Yes 0 0 No -29 0.84 Yes 41 88.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 129020890 + NM_001006109 HMCES 1 0.82 1.1 43 2.54 73.25 20 4.39 No 71 -6.45 No 0 0 No -30 0.85 Yes 40 75.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 77750747 + NM_018200 HMG20A 1 4.31 0.17 9 -6.4 80.27 43 4.76 No 18 1.21 Yes 0 0 No -30 0.69 Yes 40 68.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 77759524 + NM_018200 HMG20A 1 0.62 0.67 27 8.62 88.61 25 5.24 No 66 -3.34 No 25 0.62 Yes -25 0.62 No 45 41.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 77770648 + NM_018200 HMG20A 1 0.19 0.18 12 -4 0 15 4.58 No 68 -2.22 No 0 0 No -40 0.79 Yes 30 65.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 77775318 + NM_018200 HMG20A 1 0.51 0.38 21 -2.87 0 17 4 No 62 0.8 Yes 0 0 No -60 0.62 No 10 51.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 77776487 + NM_018200 HMG20A 1 0.21 0.14 9 10.54 95.02 39 7.22 Yes 26 0.66 No 0 0 No -38 0.96 Yes 32 96.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 77776699 + NM_018200 HMG20A 1 0.2 0.14 9 6.32 87.04 37 7.8 Yes 53 1.37 Yes 0 0 No -36 0.97 Yes 34 97.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3573900 + NM_006339 HMG20B 1 0.35 0.26 16 7.46 75.83 25 6.56 Yes 72 0.45 No 24 0.64 Yes -24 0.69 Yes 41 51.53 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 3574269 + NM_006339 HMG20B 1 0.29 0.19 11 7.43 87.36 42 9.11 Yes 29 2.31 Yes 23 0.8 Yes -41 0.4 No 29 69.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 3574338 + NM_006339 HMG20B 1 0.51 0.35 20 0.88 0 14 4.47 No 1 1.24 Yes 35 0.26 Yes -35 0.4 No 57 38.92 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 3574367 + NM_006339 HMG20B 1 1.02 0.74 32 5.01 68.4 24 5.47 No 30 1.23 Yes 23 0.44 Yes -25 0.43 No 47 32.03 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 3574407 + NM_006339 HMG20B 1 0.23 0.15 9 -2.02 63.13 22 5.2 No 70 1.19 Yes 0 0 No -21 0.34 No 47 22.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 3576261 + NM_006339 HMG20B 1 0.12 0.13 8 0.66 68.14 30 6.48 Yes 17 2.39 Yes 0 0 No -29 0.87 Yes 41 90.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3576127 + NM_006339 HMG20B 1 0.18 0.22 13 2.1 77.76 22 5.18 No -1 0.48 No 0 0 No -21 0.61 No 49 47.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 3576261 + NM_006339 HMG20B 1 4.8 5.78 71 0.66 68.14 30 6.48 Yes 17 2.39 Yes 0 0 No -29 0.87 Yes 41 90.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3576945 + NM_006339 HMG20B 1 0.25 0.33 18 -4.99 0 9 3.87 No 65 1.47 Yes 0 0 No -50 0.34 No 58 46.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 34210491 + NM_145905 HMGA1 1 0.82 2.93 64 2.09 77.9 26 6.42 Yes 13 1.93 Yes 0 0 No -25 0.81 Yes 45 87.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34211245 + NM_145905 HMGA1 1 0.01 0.19 12 -13.08 0 28 5.57 Yes -2 1.34 Yes 0 0 No -27 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 34211392 + NM_145905 HMGA1 1 0.05 0.79 37 1.48 68.62 25 6.24 Yes 12 0.96 Yes 0 0 No -24 0.73 Yes 46 83.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34212610 + NM_145905 HMGA1 1 0.11 1.81 58 -10.05 63.7 29 6.28 Yes 16 0.62 No 0 0 No -28 0.84 Yes 42 81.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 34212613 + NM_145905 HMGA1 1 0.01 0.19 14 -8.96 0 11 3.86 No 19 0.6 No 0 0 No -31 0.79 Yes 39 58.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 31035826 - NM_002128 HMGB1 1 6.27 1.13 41 4.66 78.11 31 6.29 Yes 18 1.04 Yes 30 0.58 Yes -34 0.54 No 36 59.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 31037831 - NM_002128 HMGB1 1 0.02 0.17 12 -10.48 0 29 8 Yes 16 1.54 Yes 0 0 No -28 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 174254738 - NM_002129 HMGB2 1 0.26 2.29 69 8.13 88.93 45 5.28 No 73 -3.83 No 0 0 No -28 0.31 No 40 29.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 174254791 - NM_002129 HMGB2 1 0.01 0.11 8 -1.42 59.82 33 6.24 Yes 20 -2.42 No 0 0 No -56 0.46 No 57 17.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 174254830 - NM_002129 HMGB2 1 0.01 0.1 7 3.06 0 30 7.42 Yes NA NA NA 23 0.69 Yes -29 0.84 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 150153503 + NM_001301228 HMGB3 1 7.02 0.43 23 8 87.81 31 5.92 Yes -3 0.65 No 0 0 No -30 0.88 Yes 40 89.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 24130982 - NM_000191 HMGCL 1 0.22 0.11 8 6.4 91.27 26 5.66 Yes 41 0.84 Yes 0 0 No -25 0.9 Yes 45 72.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24133776 - NM_000191 HMGCL 1 0.24 0.11 7 9.56 87.07 10 5.74 Yes -3 0.79 Yes 26 0.45 Yes -26 0.76 Yes 44 76.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 24134706 - NM_000191 HMGCL 1 0.77 0.4 23 8.32 86.26 31 4.31 No 76 -3.59 No 27 0.43 Yes -30 0.43 No 49 55.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 24149256 - NM_000191 HMGCL 1 0.19 0.11 7 5.13 78.14 37 5.66 Yes 6 0.64 No 0 0 No -18 0.7 Yes 52 71.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 74634029 + NM_000859 HMGCR 1 0.38 0.72 30 6.14 80.46 24 4.49 No 51 -2.14 No 0 0 No -24 0.9 Yes 46 94.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 74636272 + NM_000859 HMGCR 1 0.36 0.67 31 9.6 96.25 37 6.05 Yes 29 0.74 No 0 0 No -36 0.6 No 34 73.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 74640447 + NM_000859 HMGCR 1 0.12 0.32 17 4.9 84.41 35 5.27 No 33 0.5 No 0 0 No -35 0.44 No 35 58.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 74647026 + NM_000859 HMGCR 1 0.05 0.17 11 5.55 74.44 26 5.64 Yes 1 0.11 No 0 0 No -29 0.7 Yes 41 85.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 74647341 + NM_000859 HMGCR 1 0.83 2.28 66 1.76 73.64 28 7.35 Yes 15 1.79 Yes 0 0 No -27 0.79 Yes 43 72.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 74654981 + NM_000859 HMGCR 1 0.08 0.21 12 2.69 69.38 12 5.39 No 31 1.18 Yes 24 0.78 Yes -43 0.62 No 27 52.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 43293027 - NM_001324223 HMGCS1 1 0.13 0.4 20 2.91 69.21 30 5.47 No 47 0.6 No 0 0 No -29 0.56 No 43 46.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 43307927 - NM_001324223 HMGCS1 1 123.02 101.14 72 4.75 70.3 28 5.33 No 21 0.11 No 27 0.46 Yes -28 0.68 Yes 42 62.69 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 43307947 - NM_001324223 HMGCS1 1 6.73 5.61 72 0.76 66.7 21 5.56 Yes 53 -5.23 No 27 0.46 Yes -20 0.67 Yes 50 63.65 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr21 40715084 - NM_004965 HMGN1 1 0.09 1.39 57 -6.7 77.35 30 5.86 Yes 74 1.2 Yes 0 0 No -29 0.7 Yes 41 81.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 40717885 - NM_004965 HMGN1 1 0.44 4.93 71 8.8 87.79 18 6.17 Yes 5 1 Yes 23 0.77 Yes -23 0.53 No 47 71.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 40719219 - NM_004965 HMGN1 1 0.08 0.89 41 9.77 91.75 20 6.24 Yes 7 1.01 Yes 19 0.71 Yes -19 0.6 No 42 47.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 40719405 - NM_004965 HMGN1 1 0.35 3.99 68 3.34 0 30 7.33 Yes 17 1.5 Yes 24 0.88 Yes -29 0.83 Yes 41 89.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 40719410 - NM_004965 HMGN1 1 0.95 10.83 72 5.97 76.05 25 7.02 Yes 12 1.52 Yes 24 0.88 Yes -24 0.87 Yes 46 88.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 40719879 - NM_004965 HMGN1 1 0.12 1.36 48 1.49 64.18 36 9.63 Yes 23 0.78 Yes 35 0.82 Yes -35 0.81 Yes 35 87.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 40720372 - NM_004965 HMGN1 1 0.12 0.68 34 -4.53 0 10 2.98 No 17 2.63 Yes 0 0 No -29 0.87 Yes 41 92.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 40720499 - NM_004965 HMGN1 1 0.02 0.14 9 0.92 0 55 6.04 Yes NA NA NA 0 0 No -29 0.71 Yes 41 71.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 26799950 + NM_005517 HMGN2 1 0.02 0.28 16 3.2 73.52 27 5.29 No 49 0.44 No 26 0.88 Yes -22 0.43 No 44 82.25 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 26800012 + NM_005517 HMGN2 1 0.03 0.46 17 -15.92 0 15 3.87 No 31 -2.9 No 0 0 No -23 0.48 No 54 33.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 26800194 + NM_005517 HMGN2 1 0 0.11 7 -12.95 0 24 7.27 Yes 11 1.91 Yes 0 0 No -23 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 26800199 + NM_005517 HMGN2 1 0.04 0.86 40 -1.25 0 11 3.87 No 16 1.87 Yes 0 0 No -28 0.72 Yes 42 81.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26800576 + NM_005517 HMGN2 1 0.01 0.38 21 -18.19 0 37 7.49 Yes 24 1.95 Yes 0 0 No -36 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 26801065 + NM_005517 HMGN2 1 0.21 5.56 71 4.82 81.01 23 5.92 Yes 35 0.2 No 0 0 No -22 0.54 No 42 72.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 26801609 + NM_005517 HMGN2 1 0.02 0.38 21 0.35 0 9 3.87 No 14 0.92 Yes 0 0 No -26 0.68 Yes 44 68.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 79911873 - NM_001318885 HMGN3 1 3.11 10.26 72 7.24 82.87 49 5.78 Yes 22 1.06 Yes 0 0 No -35 0.85 Yes 35 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 79912103 - NM_001318885 HMGN3 1 0.29 2.46 62 -4.05 0 40 8.21 Yes 27 1.75 Yes 0 0 No -39 0.84 Yes 31 96.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 79912106 - NM_001318885 HMGN3 1 0.02 0.18 11 -13.9 0 37 8.03 Yes 24 1.76 Yes 0 0 No -36 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 79912596 - NM_001318885 HMGN3 1 0.03 0.28 16 6.8 66.4 28 6.4 Yes 15 1.15 Yes 0 0 No -27 0.95 Yes 43 95.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 79913347 - NM_001318885 HMGN3 1 0.02 0.14 9 -15.9 0 21 5.85 Yes 39 1.47 Yes 0 0 No -20 0.5 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 79913377 - NM_001318885 HMGN3 1 0.22 1.53 51 7.6 93.23 22 5.1 No 9 1.52 Yes 31 0.54 Yes -21 0.79 Yes 49 96.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 79914200 - NM_001318885 HMGN3 1 0.02 0.14 9 5.48 87.38 21 6.57 Yes 8 0.22 No 0 0 No -21 0.45 No 49 36.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 26538889 + NM_006353 HMGN4 1 0.17 0.15 11 9.74 86.27 27 5.74 Yes 14 0.58 No 0 0 No -26 0.83 Yes 44 81.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 26540128 + NM_006353 HMGN4 1 10.8 10.54 69 5.59 81.94 38 7.53 Yes 25 1.36 Yes 27 0.81 Yes -37 0.62 No 33 76.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 26542905 + NM_006353 HMGN4 1 0.5 0.54 25 6.2 70.46 57 6.38 Yes 53 0.7 No 0 0 No -33 0.76 Yes 37 88.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 26542989 + NM_006353 HMGN4 1 0.24 0.28 16 4.8 80.91 22 5.63 Yes 54 1.78 Yes 0 0 No -29 0.54 No 41 44.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 26543067 + NM_006353 HMGN4 1 0.25 0.26 18 -5.87 69.51 46 8.36 Yes 33 1.21 Yes 0 0 No -32 0.68 Yes 38 52.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 80373988 - NM_030763 HMGN5 1 7.46 8.26 72 3.8 65.05 39 8.07 Yes 26 0.56 No 41 0.46 Yes -38 0.53 No 25 67.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 80373988 - NM_030763 HMGN5 1 0.45 0.43 26 3.8 65.05 39 8.07 Yes 26 0.56 No 41 0.46 Yes -38 0.53 No 25 67.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 80374280 - NM_030763 HMGN5 1 0.81 0.61 30 7.89 84.51 36 6.08 Yes 1 0.76 No 30 0.66 Yes -30 0.57 No 40 73.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 80374280 - NM_030763 HMGN5 1 0.26 0.13 8 7.89 84.51 36 6.08 Yes 1 0.76 No 30 0.66 Yes -30 0.57 No 40 73.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 149401371 + NM_014983 HMGXB3 1 1.12 0.74 36 2.6 71.09 31 5.49 No 30 1.36 Yes 0 0 No -34 0.61 No 36 77.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 149401407 + NM_014983 HMGXB3 1 0.38 0.22 13 6.35 87.58 19 5 No 66 1.34 Yes 0 0 No -22 0.36 No 52 42.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 149401448 + NM_014983 HMGXB3 1 0.41 0.26 15 4.32 80.51 30 6.12 Yes 3 0.74 No 0 0 No -24 0.52 No 41 75.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 149402576 + NM_014983 HMGXB3 1 0.19 0.13 8 10.07 88.27 29 7.81 Yes 16 1.62 Yes 0 0 No -28 0.95 Yes 42 95.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149404067 + NM_014983 HMGXB3 1 0.27 0.18 12 4.09 77.08 31 6.3 Yes 69 -2.55 No 30 0.7 Yes -27 0.75 Yes 43 69.32 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 149409403 + NM_014983 HMGXB3 1 0.47 0.36 17 10.49 89.93 31 4.73 No 74 1.08 Yes 0 0 No -30 0.6 No 40 48.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 149416201 + NM_014983 HMGXB3 1 0.1 0.13 9 -7.48 80.5 25 6.29 Yes 44 1.08 Yes 0 0 No -21 0.62 No 46 83.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 149421352 + NM_014983 HMGXB3 1 0.15 0.13 8 -3.4 0 28 5.83 Yes 15 1.07 Yes 0 0 No -27 0.86 Yes 43 95.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 35659979 + NR_027780 HMGXB4 1 0.7 0.17 12 -2.59 0 27 5.38 No 14 0.18 No 0 0 No -26 0.53 No 44 76.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 35664576 + NR_027780 HMGXB4 1 0.32 0.11 7 6.03 83.25 17 5.8 Yes 4 1.03 Yes 0 0 No -27 0.88 Yes 43 86.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 35684242 + NR_027780 HMGXB4 1 0.18 0.1 7 4.17 0 15 4.58 No 16 1.17 Yes 0 0 No -41 0.54 No 42 88.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 162894709 + NM_001142556 HMMR 1 5.92 5.1 69 -0.32 73.85 29 5.54 No 25 0.62 No 25 0.92 Yes -28 0.93 Yes 42 94.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 162901065 + NM_001142556 HMMR 1 0.32 0.64 29 2.05 74.12 37 6.14 Yes 9 0.97 Yes 0 0 No -36 0.81 Yes 34 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 162902408 + NM_001142556 HMMR 1 0.13 0.21 12 7.39 83.17 36 5.8 Yes 23 0.86 Yes 0 0 No -25 0.68 Yes 35 73.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 162905693 + NM_001142556 HMMR 1 0.14 0.26 18 -1.21 0 48 4.03 No 35 0.6 No 0 0 No -30 0.52 No 35 59.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 35783909 + NM_002133 HMOX1 1 0.06 0.14 7 11.3 84 31 5.95 Yes 26 0.16 No 0 0 No -34 0.52 No 36 57.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 61625499 + NM_001123366 HMSD 1 0.59 0.56 29 10.21 94.6 21 4.78 No 8 0.57 No 0 0 No -23 0.5 No 47 73.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 73144708 - NM_001002032 HN1 1 0.02 0.21 10 2.19 69.11 24 5.17 No 68 0.92 Yes 0 0 No -23 0.95 Yes 47 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73144765 - NM_001002032 HN1 1 0.02 0.15 10 -7.62 69.84 30 4.16 No 11 0.95 Yes 0 0 No -29 0.72 Yes 47 61.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 73145281 - NM_001002032 HN1 1 0.17 1.29 49 8.29 88.27 23 7.29 Yes 10 1.32 Yes 22 0.85 Yes -22 0.92 Yes 48 94.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 1729779 + NM_144570 HN1L 1 0.11 0.19 10 2.11 80.76 32 5.88 Yes 50 -5.11 No 0 0 No -23 0.28 No 47 40.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1733509 + NM_144570 HN1L 1 6.08 10.4 71 8.85 84.57 43 6.1 Yes 30 0.57 No 43 0.5 Yes -43 0.74 Yes 27 89.32 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 1742398 + NM_144570 HN1L 1 0.04 0.11 7 6.75 85.23 35 6.19 Yes 8 1.37 Yes 20 0.92 Yes -34 0.62 No 36 85.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 36057404 - NM_000458 HNF1B 1 0.51 0.58 25 5.15 79.32 27 6.4 Yes 34 0.84 Yes 0 0 No -26 0.47 No 37 46.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 36057460 - NM_000458 HNF1B 1 0.1 0.13 7 1.23 62.29 38 6.16 Yes 53 0.62 No 0 0 No -16 0.55 No 54 59.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 36057534 - NM_000458 HNF1B 1 0.32 0.43 23 7.74 74.67 22 5.97 Yes 9 0.65 No 0 0 No -21 0.79 Yes 49 76.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 36062964 - NM_000458 HNF1B 1 0.27 0.35 18 2.67 60.75 48 6.78 Yes 35 2.25 Yes 0 0 No -47 0.61 No 23 87.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 36072093 - NM_000458 HNF1B 1 0.22 0.26 14 9.98 88.06 27 5.63 Yes 49 0.41 No 0 0 No -26 0.94 Yes 44 92.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 36080940 - NM_000458 HNF1B 1 1.32 1.69 50 5.5 81.36 14 3.74 No 0 0.34 No 0 0 No -25 0.4 No 45 40.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 36081297 - NM_000458 HNF1B 1 1.37 1.76 51 10.71 90.62 56 9.62 Yes 14 1.99 Yes 0 0 No -55 0.83 Yes 15 93.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36083169 - NM_000458 HNF1B 1 0.32 0.38 24 7.65 85.86 26 7.55 Yes 13 1.48 Yes 0 0 No -25 0.94 Yes 45 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36093737 - NM_000458 HNF1B 1 53.83 41.54 72 9.68 93.22 28 4.39 No 68 -4.04 No 27 0.62 Yes -21 0.86 Yes 49 86.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54675835 + NR_135167 HNRNPA1 1 0 0.1 7 1.8 0 26 5.75 Yes 18 0.61 No 24 0.86 Yes -30 0.53 No 45 81.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 54676153 + NR_135167 HNRNPA1 1 0.01 0.57 31 -5.94 0 43 6.84 Yes 2 0.2 No 31 0.82 Yes -14 0.57 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 54676164 + NR_135167 HNRNPA1 1 0 0.17 10 -1.85 0 19 7.27 Yes 6 0.28 No 31 0.82 Yes -18 0.52 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 54676182 + NR_135167 HNRNPA1 1 0 0.31 19 3.59 0 37 8.83 Yes 24 1.23 Yes 0 0 No -31 0.67 Yes 39 67.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 54676862 + NR_135167 HNRNPA1 1 3.66 131.67 72 4.83 89.81 26 3.52 No 70 -1.34 No 25 0.95 Yes -25 0.92 Yes 45 95.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54678023 + NR_135167 HNRNPA1 1 0.06 3.56 65 0.91 62.02 57 6.34 Yes 44 0.77 No 23 0.85 Yes -27 0.43 No 43 37.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 54678332 + NR_135167 HNRNPA1 1 7378.95 3476 72 8.23 85.35 28 6.32 Yes 15 0.75 No 27 0.91 Yes -27 0.81 Yes 43 88.97 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54678720 + NR_135167 HNRNPA1 1 1.11 0.51 28 5.87 80.57 15 5.04 No 63 0.96 Yes 0 0 No -28 0.47 No 42 75.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 53203030 + NM_001011724 HNRNPA1L2 1 15.11 0.71 36 -1.18 83.28 31 6.06 Yes 18 0.83 Yes 0 0 No -30 0.73 Yes 40 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 53216503 + NM_001011724 HNRNPA1L2 1 18.12 2.04 62 3.95 80.36 24 6.2 Yes -1 -1.72 No 0 0 No -26 0.41 No 44 65.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 26230077 - NM_002137 HNRNPA2B1 1 0.01 0.24 15 -1.21 0 30 6 Yes 59 0.93 Yes 0 0 No -29 0.68 Yes 41 85.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 26230081 - NM_002137 HNRNPA2B1 1 2.15 56.08 72 10.18 95.72 26 5.66 Yes 55 0.94 Yes 25 0.84 Yes -25 0.7 Yes 45 82.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 26230749 - NM_002137 HNRNPA2B1 1 2.92 75.81 72 5.09 63.22 33 7.32 Yes 20 0.85 Yes 32 0.9 Yes -33 0.78 Yes 37 84.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 26231271 - NM_002137 HNRNPA2B1 1 0.3 8.01 72 0.15 68.07 20 4.8 No 69 0.31 No 0 0 No -35 0.6 No 50 76.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 26231968 - NM_002137 HNRNPA2B1 1 0 0.15 7 -0.46 0 30 5.62 Yes 17 1.81 Yes 23 0.78 Yes -32 0.47 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 26232149 - NM_002137 HNRNPA2B1 1 0.02 0.26 17 -6.79 66.02 11 5.2 No 71 0.35 No 0 0 No -21 0.47 No 40 42.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 26232213 - NM_002137 HNRNPA2B1 1 0.04 0.36 22 1.1 0 20 4.6 No 7 0.46 No 34 0.76 Yes -19 0.57 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 26233219 - NM_002137 HNRNPA2B1 1 0.01 0.19 12 -14.06 60.39 22 5 No 57 -4.45 No 0 0 No -22 0.78 Yes 56 54.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 26235560 - NM_002137 HNRNPA2B1 1 0.03 0.4 21 -6.15 0 13 4 No 0 0.24 No 28 0.74 Yes -11 0.82 Yes 58 31.62 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 26236274 - NM_002137 HNRNPA2B1 1 0.01 0.28 16 3.4 0 21 4.94 No 72 1.25 Yes 0 0 No -31 0.5 No 38 43.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 26237081 - NM_002137 HNRNPA2B1 1 0.01 0.21 12 -5.32 0 25 5.38 No 12 1.02 Yes 0 0 No -24 0.75 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 26237351 - NM_002137 HNRNPA2B1 1 0.12 2.29 63 -10.23 77.28 31 5.05 No 70 0.65 No 0 0 No -23 0.32 No 39 37.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 26237485 - NM_002137 HNRNPA2B1 1 0.01 0.11 7 -9.3 0 28 5.27 No 15 0.52 No 0 0 No -27 0.84 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 26237486 - NM_002137 HNRNPA2B1 1 0.01 0.25 14 -10.26 0 27 5.18 No 14 0.52 No 0 0 No -26 0.85 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 26237487 - NM_002137 HNRNPA2B1 1 19.46 370.88 72 10.14 92.45 26 5.09 No 13 0.53 No 25 0.81 Yes -25 0.86 Yes 45 74.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 26237505 - NM_002137 HNRNPA2B1 1 0.02 0.33 17 0.15 58.8 38 5.91 Yes 52 0.35 No 25 0.81 Yes -25 0.71 Yes 45 58.83 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 178080717 + NM_194247 HNRNPA3 1 0.03 0.47 25 -2.61 0 21 4.58 No 25 0.45 No 0 0 No -33 0.53 No 33 62.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 178081269 + NM_194247 HNRNPA3 1 0.01 0.13 7 -2.64 61.16 19 6.55 Yes 61 1.07 Yes 0 0 No -18 0.58 No 43 40.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 178081454 + NM_194247 HNRNPA3 1 0.01 0.11 8 -11.37 0 18 4.58 No 13 -2.59 No 0 0 No -38 0.4 No 29 62.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 178081590 + NM_194247 HNRNPA3 1 0.18 0.38 17 -5.61 84.65 27 6.17 Yes 14 0.83 Yes 0 0 No -26 0.57 No 44 58.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 178086787 + NM_194247 HNRNPA3 1 0.25 3.07 62 9.59 99.45 18 4.88 No 5 1.06 Yes 0 0 No -21 0.66 No 49 61.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 177631837 + NM_031266 HNRNPAB 1 0.22 0.24 15 2.48 62.25 26 5.26 No 34 1.84 Yes 0 0 No -46 0.74 Yes 24 55.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 21679723 - NM_001077443 HNRNPC 1 2.39 49.69 72 1.94 70.69 31 5.74 Yes 63 0.13 No 25 0.62 Yes -28 0.78 Yes 42 83.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 21679747 - NM_001077443 HNRNPC 1 0.01 0.15 8 0.87 0 52 7.08 Yes 39 0.13 No 25 0.62 Yes -45 0.49 No 25 85.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 21681268 - NM_001077443 HNRNPC 1 0.02 0.42 23 -6.35 0 19 4.22 No 23 0.45 No 0 0 No -39 0.49 No 31 50.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 21684270 - NM_001077443 HNRNPC 1 0.01 0.21 12 -1.43 77 39 7.21 Yes 57 1.37 Yes 0 0 No -43 0.75 Yes 27 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 21699230 - NM_001077443 HNRNPC 1 0.01 0.17 10 -7.71 0 26 6.55 Yes 13 1.55 Yes 23 0.61 Yes -25 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 21704620 - NM_001077443 HNRNPC 1 0.07 0.39 22 6.92 85.06 17 5.09 No 4 1.41 Yes 27 0.26 Yes -16 0.37 No 54 72.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 21731496 - NM_001077443 HNRNPC 1 263.01 1471.97 72 10.04 92.11 34 9.35 Yes 52 1.72 Yes 33 0.94 Yes -33 0.87 Yes 37 93.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 21731742 - NM_001077443 HNRNPC 1 0.14 0.75 34 8.22 92.62 35 5.35 No 58 0.51 No 28 0.67 Yes -34 0.42 No 36 59.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 21731989 - NM_001077443 HNRNPC 1 17.04 96.57 72 12.48 93.2 29 6.65 Yes 16 1.96 Yes 24 0.86 Yes -24 0.78 Yes 46 85.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 21733166 - NM_001077443 HNRNPC 1 0.09 0.53 23 1.61 0 34 4.18 No 21 0.08 No 0 0 No -26 0.76 Yes 44 70.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 21736828 - NM_001077443 HNRNPC 1 4.52 25.42 72 9.63 96.32 16 5.15 No 3 1.61 Yes 22 0.93 Yes -22 0.92 Yes 48 88.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 83276155 - NM_001003810 HNRNPD 1 2.39 29.76 72 5.29 82.57 34 6.94 Yes 15 1.5 Yes 27 0.92 Yes -27 0.59 No 37 51.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 83276547 - NM_001003810 HNRNPD 1 0.02 0.18 13 -2.32 0 16 4.12 No 14 1.97 Yes 0 0 No -26 0.92 Yes 44 90.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 83276550 - NM_001003810 HNRNPD 1 0.04 0.33 15 -0.43 0 24 7.68 Yes 11 1.98 Yes 0 0 No -23 0.9 Yes 47 91.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 83277837 - NM_001003810 HNRNPD 1 65.38 544.92 72 6.13 85.58 30 5.51 No 25 1.6 Yes 29 0.9 Yes -29 0.77 Yes 41 63.28 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 83292738 - NM_001003810 HNRNPD 1 686.29 630.71 72 4.98 75.76 47 6.88 Yes -3 0.91 Yes 32 0.7 Yes -32 0.82 Yes 38 78.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 83346821 - NM_001207000 HNRNPDL 1 15.01 70.97 72 5.29 82.57 34 5.69 Yes 15 1.5 Yes 27 0.94 Yes -27 0.68 Yes 43 66.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 83346821 - NM_001207000 HNRNPDL 1 0.05 0.24 14 5.29 82.57 34 5.69 Yes 15 1.5 Yes 27 0.94 Yes -27 0.68 Yes 43 66.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 83346948 - NM_001207000 HNRNPDL 1 0.08 0.38 22 9.27 90.97 32 4.75 No 46 1.11 Yes 0 0 No -31 0.92 Yes 39 96.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 83347782 - NM_001207000 HNRNPDL 1 0.62 0.17 10 2.24 0 29 6.83 Yes 16 0.58 No 0 0 No -28 0.82 Yes 42 94.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 83347787 - NM_001207000 HNRNPDL 1 2324.86 674.63 72 9.39 84.18 24 6.45 Yes 11 0.6 No 23 0.93 Yes -23 0.84 Yes 47 93.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 83348456 - NM_001207000 HNRNPDL 1 0.02 0.15 9 -24.35 0 34 6.43 Yes 7 0.67 No 0 0 No -25 0.62 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 83349355 - NM_001207000 HNRNPDL 1 0.26 2.08 61 2.63 76 82 8.83 Yes 3 -1.69 No 24 0.7 Yes -32 0.55 No 38 63.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 43886897 - NM_001098207 HNRNPF 1 0.35 3.6 70 -0.99 0 47 8.64 Yes 40 1.54 Yes 0 0 No -46 0.65 No 18 79.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 43886901 - NM_001098207 HNRNPF 1 0.02 0.22 12 -8.36 81.54 43 8.44 Yes 36 1.54 Yes 0 0 No -42 0.74 Yes 22 78.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179041232 - NM_005520 HNRNPH1 1 0.05 0.6 31 10.08 88.95 32 4.98 No 0 0.6 No 0 0 No -23 0.43 No 47 46.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179041779 - NM_005520 HNRNPH1 1 0.77 9.85 72 8.75 85.05 44 9.52 Yes 31 2.32 Yes 0 0 No -33 0.66 No 38 60.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 179042623 - NM_005520 HNRNPH1 1 0.01 0.13 7 3.02 79.52 26 5.29 No 53 0.89 Yes 22 0.95 Yes -25 0.88 Yes 45 83.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179044649 - NM_005520 HNRNPH1 1 0.01 0.1 7 -25.3 0 30 6.09 Yes 35 0.32 No 27 0.63 Yes -29 0.57 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179044650 - NM_005520 HNRNPH1 1 0.11 1.51 52 -14.39 0 29 6.02 Yes 34 0.31 No 27 0.63 Yes -28 0.64 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179044913 - NM_005520 HNRNPH1 1 0.63 10.39 72 8.23 94.65 17 3.87 No 27 1.13 Yes 22 0.81 Yes -27 0.56 No 43 75.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 179044913 - NM_005520 HNRNPH1 1 0.01 0.18 11 8.23 94.65 17 3.87 No 27 1.13 Yes 22 0.81 Yes -27 0.56 No 43 75.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 179044913 - NM_005520 HNRNPH1 1 0.45 7.39 72 8.23 94.65 17 3.87 No 27 1.13 Yes 22 0.81 Yes -27 0.56 No 43 75.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 179044913 - NM_005520 HNRNPH1 1 0.01 0.14 8 8.23 94.65 17 3.87 No 27 1.13 Yes 22 0.81 Yes -27 0.56 No 43 75.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 179045053 - NM_005520 HNRNPH1 1 0.01 0.11 7 -11.49 0 12 4.24 No 16 0.67 No 23 0.8 Yes -28 0.65 No 38 62.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179046362 - NM_005520 HNRNPH1 1 0.01 0.24 13 5.84 79.25 22 7.47 Yes 76 0.68 No 21 0.71 Yes -21 0.62 No 49 78.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 179046485 - NM_005520 HNRNPH1 1 0.01 0.14 8 4.44 76.69 28 4.04 No 34 0.05 No 0 0 No -32 0.67 Yes 38 74.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 179047039 - NM_005520 HNRNPH1 1 0.08 1.18 42 9.63 86.78 17 5.39 No 4 0.1 No 28 0.56 Yes -28 0.54 No 45 39.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179048350 - NM_005520 HNRNPH1 1 0.01 0.19 14 4.56 81.45 26 5.57 Yes 56 1.34 Yes 18 0.67 Yes -25 0.94 Yes 45 90.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179048372 - NM_005520 HNRNPH1 1 0.01 0.15 10 -1.32 59.69 16 5.92 Yes 34 1.33 Yes 22 0.57 Yes -46 0.83 Yes 24 73.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179048978 - NM_005520 HNRNPH1 1 0.17 3.57 67 5.82 70.09 20 5.38 No 7 1.2 Yes 23 0.61 Yes -19 0.68 Yes 47 62.15 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 179050165 - NM_005520 HNRNPH1 1 0.08 0.21 12 -13.35 0 27 5.74 Yes 14 0.91 Yes 0 0 No -26 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 179050189 - NM_005520 HNRNPH1 1 1.5 3.79 67 3.96 75.23 15 5.11 No 2 0.33 No 22 0.65 Yes -15 0.59 No 56 65.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 70098249 + NM_001322437 HNRNPH3 1 0.03 0.15 11 -4.88 0 35 7.24 Yes 8 1.15 Yes 30 0.8 Yes -7 0.48 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 70101523 + NM_001322437 HNRNPH3 1 0.04 0.15 11 -1.86 0 12 4.09 No 29 0.98 Yes 0 0 No -35 0.86 Yes 35 92.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70101539 + NM_001322437 HNRNPH3 1 0.07 0.24 17 -6.9 0 22 4.58 No 45 0.97 Yes 0 0 No -51 0.74 Yes 19 90.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70101694 + NM_001322437 HNRNPH3 1 0.19 0.38 23 7.72 88.08 34 5.54 No 71 0.41 No 27 0.85 Yes -27 0.49 No 50 66.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 86585123 - NM_031262 HNRNPK 1 0.02 0.57 31 5.84 87.88 14 4.87 No 73 -4.89 No 0 0 No -24 0.59 No 49 37.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 86585222 - NM_031262 HNRNPK 1 0.01 0.28 13 1.08 74.26 28 5.83 Yes 41 0.24 No 0 0 No -27 0.75 Yes 17 55.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 86585246 - NM_031262 HNRNPK 1 0.02 0.53 30 -13.39 0 30 5.55 No 67 1.14 Yes 0 0 No -26 0.39 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 86585720 - NM_031262 HNRNPK 1 2.01 30.67 72 5.05 95.16 22 4.62 No 24 0.81 Yes 24 0.76 Yes -22 0.75 Yes 48 78.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 86585732 - NM_031262 HNRNPK 1 0.04 0.68 29 -18.02 0 49 8.03 Yes 12 0.83 Yes 24 0.76 Yes -10 0.61 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 86586271 - NM_031262 HNRNPK 1 0.01 0.22 15 -2.81 0 21 7.26 Yes 8 1.29 Yes 0 0 No -26 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 86587900 - NM_031262 HNRNPK 1 0.01 0.44 26 -0.41 0 34 4.96 No 21 1.38 Yes 34 0.89 Yes -22 0.73 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 86589248 - NM_031262 HNRNPK 1 0.01 0.17 9 1.46 50.97 33 8.49 Yes 20 0.87 Yes 0 0 No -32 0.69 Yes 38 67.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 86589534 - NM_031262 HNRNPK 1 0.01 0.18 10 0.84 0 39 7 Yes 11 0.98 Yes 25 0.81 Yes -23 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 86590418 - NM_031262 HNRNPK 1 0.02 0.5 26 -11.28 0 67 13.15 Yes 44 0.89 Yes 0 0 No -9 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 86592687 - NM_031262 HNRNPK 1 0.02 0.64 29 1.95 76.33 24 4.66 No 11 0.6 No 0 0 No -23 0.74 Yes 47 61.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 86593171 - NM_031262 HNRNPK 1 0.01 0.35 17 2.03 67.71 29 5.74 Yes -4 -1.44 No 0 0 No -45 0.76 Yes 25 84.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 86593214 - NM_031262 HNRNPK 1 0.14 3.5 67 -3.33 55.57 16 4.64 No 66 0.53 No 24 0.74 Yes -59 0.72 Yes 12 51.06 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 39327420 - NM_001005335 HNRNPL 1 0.01 0.14 10 -12.3 0 26 6.51 Yes 53 -3.07 No 0 0 No -25 0.81 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 39328131 - NM_001005335 HNRNPL 1 0.01 0.15 10 1.96 0 23 5.7 Yes 10 1.3 Yes 0 0 No -22 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 39329237 - NM_001005335 HNRNPL 1 0.01 0.13 9 -13.26 0 33 5.92 Yes 20 0.45 No 0 0 No -32 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 39329263 - NM_001005335 HNRNPL 1 0.01 0.1 7 -0.78 62.46 26 5.64 Yes 42 -2.67 No 0 0 No -25 0.82 Yes 45 25.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 39329548 - NM_001005335 HNRNPL 1 0.03 0.15 9 3.72 79.02 25 5.23 No 47 0.24 No 0 0 No -24 0.56 No 46 54.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39332323 - NM_001005335 HNRNPL 1 0.64 7.14 72 1.91 76.23 36 7.68 Yes 23 1.26 Yes 25 0.73 Yes -25 0.9 Yes 45 81.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39332808 - NM_001005335 HNRNPL 1 0.02 0.21 12 7.89 92.03 22 7.28 Yes 9 0.67 No 0 0 No -21 0.69 Yes 49 70.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39333279 - NM_001005335 HNRNPL 1 0.01 0.1 7 4.03 75.31 39 6.59 Yes 0 0.63 No 0 0 No -38 0.9 Yes 32 85.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39340847 - NM_001005335 HNRNPL 1 0.25 0.14 9 3.12 83.61 28 4.8 No 42 -3.74 No 0 0 No -23 0.52 No 43 57.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39341953 - NM_001005335 HNRNPL 1 0.18 0.11 7 8.82 87.31 30 8.93 Yes 39 1.37 Yes 0 0 No -29 0.76 Yes 41 79.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 38793343 - NM_138394 HNRNPLL 1 0.5 0.32 17 3.83 80.12 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.77 Yes 51 87.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 38805145 - NM_138394 HNRNPLL 1 2.22 1.42 48 1.95 76.3 45 8.25 Yes 65 0.18 No 22 0.9 Yes -22 0.54 No 26 87.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 38808785 - NM_138394 HNRNPLL 1 0.15 0.11 7 6.49 82.04 25 5.48 No 68 1.14 Yes 0 0 No -24 0.91 Yes 46 68.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 8522067 + NM_005968 HNRNPM 1 0.01 0.13 7 10.38 92.08 17 5.46 No 34 -1.24 No 0 0 No -26 0.69 Yes 44 76.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 8528492 + NM_005968 HNRNPM 1 0.01 0.1 7 2.5 73.48 26 5 No 33 0.61 No 0 0 No -25 0.7 Yes 45 61.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 8528478 + NM_005968 HNRNPM 1 0.01 0.13 9 -18.08 0 32 6.87 Yes 19 0.63 No 0 0 No -31 0.85 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 8528479 + NM_005968 HNRNPM 1 0.01 0.1 7 -14.27 0 33 6.94 Yes 20 0.63 No 0 0 No -32 0.77 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 8529633 + NM_005968 HNRNPM 1 0.02 0.33 17 9.46 76.5 24 4.76 No 1 0.82 Yes 0 0 No -23 0.86 Yes 47 91.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8530363 + NM_005968 HNRNPM 1 0.02 0.32 19 4.31 86.5 21 5.12 No 54 0.35 No 25 0.68 Yes -20 0.37 No 46 39.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 8539623 + NM_005968 HNRNPM 1 0.04 0.14 8 4.19 0 28 5.11 No 32 0.58 No 0 0 No -28 0.43 No 39 67.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8551883 + NM_005968 HNRNPM 1 0.13 1.11 43 -0.97 69.1 26 5.66 Yes -3 0.02 No 29 0.68 Yes -25 0.81 Yes 45 81.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 23637552 - NM_001297622 HNRNPR 1 0.02 0.11 8 -4.85 0 11 4.12 No 33 1.53 Yes 0 0 No -45 0.84 Yes 25 91.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 23645180 - NM_001297622 HNRNPR 1 0.03 0.18 10 -10.08 73.01 60 7.7 Yes 47 0.35 No 0 0 No -27 0.95 Yes 43 91.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 23645191 - NM_001297622 HNRNPR 1 11.73 69.74 72 -1.6 0 49 7 Yes 36 0.37 No 29 0.43 Yes -16 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 23648160 - NM_001297622 HNRNPR 1 0.02 0.17 8 -0.58 0 42 6.93 Yes 58 0.44 No 44 0.08 Yes -41 0.6 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 23660125 - NM_001297622 HNRNPR 1 1806.73 596.31 72 5.67 78.21 24 5.19 No 44 1.81 Yes 24 0.57 Yes -24 0.56 No 46 67.52 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 23663254 - NM_001297622 HNRNPR 1 0.42 0.14 10 3.01 0 37 6.86 Yes 24 1.49 Yes 0 0 No -36 0.71 Yes 34 77.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 23664657 - NM_001297622 HNRNPR 1 0.08 0.57 27 0.96 86.22 41 5.18 No 37 0.94 Yes 20 0.32 Yes -22 0.43 No 30 51.65 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 23667511 - NM_001297622 HNRNPR 1 44.09 102.15 72 5.49 90.08 28 4.24 No 3 0.89 Yes 24 0.85 Yes -27 0.5 No 43 79.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 23667514 - NM_001297622 HNRNPR 1 26.48 62.13 72 4.77 85.81 25 4.01 No 0 0.89 Yes 24 0.85 Yes -24 0.6 No 46 80.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 23667532 - NM_001297622 HNRNPR 1 0.16 0.38 22 4.23 67.36 24 4.85 No 34 0.03 No 24 0.85 Yes -32 0.74 Yes 47 36.41 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 245018339 - NM_004501 HNRNPU 1 0.01 0.24 14 -0.53 0 16 3.27 No 58 -0.98 No 0 0 No -30 0.85 Yes 40 92.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 245018925 - NM_004501 HNRNPU 1 0.01 0.1 7 0.67 59.68 34 5.73 Yes 34 0.97 Yes 20 0.92 Yes -23 0.34 No 47 23.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 245020102 - NM_004501 HNRNPU 1 0.01 0.28 16 3.57 74.58 16 6.16 Yes 60 -5.72 No 0 0 No -14 0.33 No 48 59.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 245020158 - NM_004501 HNRNPU 1 0 0.13 9 -7.48 0 30 4.24 No 73 -4.32 No 0 0 No -29 0.79 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 245022138 - NM_004501 HNRNPU 1 0.02 0.49 29 -5.65 0 9 3.87 No 7 0.47 No 0 0 No -29 0.94 Yes 41 97.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 245023298 - NM_004501 HNRNPU 1 0.01 0.22 13 6.29 74.08 28 5.83 Yes 71 0.72 No 0 0 No -27 0.7 Yes 43 86.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 245023775 - NM_004501 HNRNPU 1 0.03 0.38 23 -17.21 0 27 5.39 No 64 0.99 Yes 0 0 No -26 0.86 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 41777218 + NM_001301016 HNRNPUL1 1 0.05 0.31 16 9.87 79.73 34 5.92 Yes 70 0.08 No 0 0 No -23 0.42 No 47 55.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 41787034 + NM_001301016 HNRNPUL1 1 0.03 0.1 7 5.16 81.1 22 5.28 No 48 0.38 No 28 0.93 Yes -21 0.89 Yes 49 77.85 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 41798768 + NM_001301016 HNRNPUL1 1 0.05 0.29 17 10.42 87.79 23 5.07 No 60 -2.25 No 0 0 No -26 0.48 No 44 82.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 41808587 + NM_001301016 HNRNPUL1 1 0.04 0.26 14 3.31 80.77 16 5.19 No 49 2.48 Yes 0 0 No -61 0.67 Yes 51 52.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 41811532 + NM_001301016 HNRNPUL1 1 0.14 0.26 16 7.49 87.99 24 4.47 No -2 -0.57 No 28 0.53 Yes -40 0.63 No 47 85.7 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 41811550 + NM_001301016 HNRNPUL1 1 16.64 30.81 72 7.01 86.18 10 4.99 No 45 -0.48 No 28 0.53 Yes -28 0.77 Yes 42 61.43 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 62483467 - NR_037946 HNRNPUL2-BSCL2 1 0.41 1.78 57 5.83 84.04 13 5.17 No 37 0.86 Yes 0 0 No -21 0.75 Yes 49 88.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62484691 - NR_037946 HNRNPUL2-BSCL2 1 0.19 1.57 56 7.08 88.84 32 5.36 No 9 1.18 Yes 0 0 No -21 0.56 No 49 81.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 62486159 - NR_037946 HNRNPUL2-BSCL2 1 0.03 0.22 14 1.26 0 35 9.11 Yes 22 0.74 No 0 0 No -34 0.95 Yes 36 93.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62486163 - NR_037946 HNRNPUL2-BSCL2 1 0.11 0.83 38 7.89 85.05 31 8.89 Yes 18 0.76 No 0 0 No -30 0.96 Yes 40 93.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62493355 - NR_037946 HNRNPUL2-BSCL2 1 0.2 0.36 23 7.4 96.05 18 4.84 No 18 0.75 No 0 0 No -17 0.5 No 53 65.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 23754238 - NM_020834 HOMEZ 1 1.35 0.5 25 7.79 88.52 24 4.87 No 23 0.8 Yes 23 0.93 Yes -23 0.93 Yes 47 90.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23754821 - NM_020834 HOMEZ 1 2.36 0.68 32 6.85 76.67 22 6.08 Yes 9 1.47 Yes 22 0.69 Yes -25 0.57 No 48 59.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 60281200 + NM_015888 HOOK1 1 0.35 0.13 7 8.95 77.46 56 7.46 Yes 57 1.21 Yes 0 0 No -43 0.69 Yes 27 79.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 60313971 + NM_015888 HOOK1 1 0.3 0.15 10 -2.41 0 9 4.36 No -4 0.75 No 23 0.8 Yes -28 0.48 No 56 34.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 60329496 + NM_015888 HOOK1 1 2.49 1.39 53 -0.56 57.5 80 5.6 Yes 67 0.03 No 42 0.55 Yes -42 0.61 No 28 81.61 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 60333902 + NM_015888 HOOK1 1 0.36 0.17 11 -7.59 0 13 4.24 No 50 0.55 No 26 0.71 Yes -49 0.42 No 21 37.03 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 12875729 - NM_013312 HOOK2 1 25.27 1.26 50 4.91 83.54 25 6 Yes 12 1.2 Yes 0 0 No -24 0.87 Yes 46 91.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42768884 + NM_032410 HOOK3 1 0.23 0.19 14 6.14 77.15 23 6.22 Yes 10 0.88 Yes 0 0 No -22 0.75 Yes 48 76.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42783868 + NM_032410 HOOK3 1 0.46 0.47 24 6.57 81.8 37 6.68 Yes 24 1.66 Yes 0 0 No -28 0.73 Yes 42 78.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42786922 + NM_032410 HOOK3 1 0.34 0.4 22 11.13 93.17 66 7.36 Yes 53 0.94 Yes 0 0 No -27 0.62 No 46 87.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 42843604 + NM_032410 HOOK3 1 0.25 0.25 16 7.73 88.53 33 4.24 No 20 0.66 No 0 0 No -32 0.81 Yes 38 79.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 42849576 + NM_032410 HOOK3 1 0.14 0.14 8 10.53 89.8 25 4.47 No 17 -0.97 No 24 0.64 Yes -29 0.67 Yes 41 86.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 42868475 + NM_032410 HOOK3 1 0.59 0.49 27 -0.42 0 29 7.1 Yes 41 0.44 No 0 0 No -28 0.79 Yes 42 92.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 42871281 + NM_032410 HOOK3 1 0.13 0.14 9 2.57 0 22 5.39 No 9 1.43 Yes 0 0 No -21 0.83 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 85928499 - NR_134505 HOST2 1 1.29 0.79 37 -3.19 0 21 4.34 No 58 1.46 Yes 0 0 No -24 0.41 No 55 20.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 54448261 + NM_014620 HOXC4 1 12.11 1.65 51 13.7 91.22 61 8.72 Yes NA NA NA 0 0 No -29 0.7 Yes 30 45.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 21072145 - NM_016287 HP1BP3 1 0.08 0.26 14 1.84 0 65 8.02 Yes 9 0.99 Yes 0 0 No -26 0.7 Yes 44 66.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 21073500 - NM_016287 HP1BP3 1 0.18 0.64 29 3.26 0 35 4.48 No 75 1 Yes 0 0 No -28 0.57 No 42 65.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 21076469 - NM_016287 HP1BP3 1 4.32 9.32 72 6.17 83.17 36 6.84 Yes 23 1.01 Yes 0 0 No -28 0.66 No 42 65.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 21076469 - NM_016287 HP1BP3 1 0.11 0.22 12 6.17 83.17 36 6.84 Yes 23 1.01 Yes 0 0 No -28 0.66 No 42 65.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 21081898 - NM_016287 HP1BP3 1 2.75 5.76 72 7.14 86.16 24 5.65 Yes 11 0.85 Yes 0 0 No -23 0.79 Yes 47 82.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 21088895 - NM_016287 HP1BP3 1 0.04 0.11 8 8.66 85.86 18 4.58 No 54 0.58 No 0 0 No -22 0.65 No 43 90.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 21092020 - NM_016287 HP1BP3 1 0.24 0.74 36 1.16 0 34 6.13 Yes 5 0.24 No 0 0 No -33 0.42 No 40 41.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 21097555 - NM_016287 HP1BP3 1 0.19 0.67 36 1.03 0 15 4.58 No 12 0.52 No 0 0 No -27 0.45 No 43 42.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 21097986 - NM_016287 HP1BP3 1 0.06 0.18 12 5.11 77.96 45 5.51 No 52 0.88 Yes 0 0 No -44 0.56 No 26 80.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 21101313 - NM_016287 HP1BP3 1 0.06 0.17 11 6.9 99.17 17 5.29 No 4 1.03 Yes 0 0 No -25 0.44 No 45 55.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 21102499 - NM_016287 HP1BP3 1 3.52 10.14 71 12.04 100 32 5.08 No 36 1.09 Yes 24 0.83 Yes -31 0.48 No 39 57.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 21103205 - NM_016287 HP1BP3 1 0.1 0.39 20 5.45 79.67 29 4.94 No 41 1.81 Yes 0 0 No -23 0.83 Yes 47 71.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 21103290 - NM_016287 HP1BP3 1 0.23 0.94 44 7.65 86.33 30 4.15 No 72 0.44 No 0 0 No -29 0.39 No 41 44.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 21106402 - NM_016287 HP1BP3 1 2.39 7.07 72 5.54 86.35 27 6.8 Yes 25 0.02 No 0 0 No -26 0.68 Yes 44 54.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 10546390 + NM_001258359 HPCAL1 1 0.75 0.17 11 7.23 84.12 34 7.4 Yes 52 -0.52 No 23 0.32 Yes -19 0.43 No 47 79.8 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 10548684 + NM_001258359 HPCAL1 1 1.44 0.28 14 2.52 68.03 29 6.78 Yes 16 2.3 Yes 31 0.93 Yes -28 0.8 Yes 42 86.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 10548687 + NM_001258359 HPCAL1 1 13.76 2.44 55 3.58 81.48 32 7 Yes 19 2.29 Yes 31 0.93 Yes -31 0.81 Yes 39 88.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 10564650 + NM_001258359 HPCAL1 1 0.74 0.22 11 7.33 78.9 26 7.28 Yes 13 0.72 No 25 0.59 Yes -25 0.5 No 45 63.44 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 10566345 + NM_001258359 HPCAL1 1 0.84 0.19 12 9.61 86.05 30 5.38 No 17 0.4 No 22 0.92 Yes -22 0.89 Yes 48 85.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 170657363 - NM_017867 HPF1 1 0.43 0.51 28 9.7 86.5 41 8.49 Yes 28 1.18 Yes 0 0 No -40 0.94 Yes 30 97.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 170669051 - NM_017867 HPF1 1 0.54 0.44 24 7.22 88.03 29 6.32 Yes 16 0.41 No 0 0 No -23 0.47 No 47 73.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 170669158 - NM_017867 HPF1 1 0.97 0.82 39 7.38 83.37 30 5.83 Yes 17 0.86 Yes 0 0 No -29 0.95 Yes 41 97.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 133624218 + NM_000194 HPRT1 1 0.02 0.1 7 -8.69 0 27 9.56 Yes 14 1.5 Yes 0 0 No -26 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 133625347 + NM_000194 HPRT1 1 0.03 0.14 7 7.74 81.37 17 7.35 Yes 4 0.99 Yes 0 0 No -30 0.5 No 54 57.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 133625411 + NM_000194 HPRT1 1 0.08 0.39 19 1.78 64.18 33 7.35 Yes 20 1.02 Yes 0 0 No -32 0.81 Yes 38 81.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 100177480 - NM_001322487 HPS1 1 0.18 0.18 10 1.19 0 38 4.96 No 18 1.38 Yes 0 0 No -37 0.7 Yes 33 82.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 100185442 - NM_001322487 HPS1 1 0.23 0.18 9 6.18 82.45 31 6.08 Yes 50 1.72 Yes 0 0 No -30 0.52 No 40 68.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 100190538 - NM_001322487 HPS1 1 0.36 0.26 14 7.75 85.21 33 4.46 No 16 0.57 No 0 0 No -28 0.75 Yes 42 80.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 100195309 - NM_001322487 HPS1 1 0.41 0.51 27 3.88 70.34 28 5.65 Yes 2 -1.06 No 0 0 No -27 0.56 No 45 67.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 100202715 - NM_001322487 HPS1 1 12.55 19.46 72 3.81 80.95 24 4.9 No 63 1.3 Yes 23 0.9 Yes -23 0.97 Yes 47 92.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 148847984 + NM_032383 HPS3 1 1.1 0.39 20 9.63 91.9 28 6.48 Yes 15 2.26 Yes 27 0.95 Yes -27 0.85 Yes 43 94.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 148858778 + NM_032383 HPS3 1 0.21 0.13 8 5.87 87.51 17 5.56 Yes 4 0.94 Yes 24 0.73 Yes -24 0.45 No 46 52.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 148858856 + NM_032383 HPS3 1 0.21 0.11 7 5.25 84.32 18 4.92 No 59 0.24 No 0 0 No -26 0.8 Yes 44 62.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 148875140 + NM_032383 HPS3 1 1 0.6 32 1.59 0 32 5.57 Yes 76 0.62 No 0 0 No -26 0.69 Yes 44 56.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 148880903 + NM_032383 HPS3 1 0.29 0.13 7 6.55 80.86 43 6.07 Yes 9 1.13 Yes 0 0 No -25 0.9 Yes 45 91.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 148884851 + NM_032383 HPS3 1 4.55 2.46 63 4.8 73.52 36 5.51 No 42 1.04 Yes 25 0.82 Yes -25 0.85 Yes 45 81.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 148884874 + NM_032383 HPS3 1 0.89 0.43 21 -2.49 76.44 30 5.66 Yes 65 1.03 Yes 0 0 No -29 0.86 Yes 41 89.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 148885675 + NM_032383 HPS3 1 7.84 3.4 69 6.22 80.06 24 7.07 Yes 11 0.83 Yes 23 0.83 Yes -23 0.63 No 47 75.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 148888257 + NM_032383 HPS3 1 1.4 0.58 30 7.09 77.31 29 3.84 No 21 1.03 Yes 23 0.66 Yes -28 0.74 Yes 42 69.2 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 26849939 - NR_073136 HPS4 1 0.94 0.44 22 12.78 90.06 25 6.32 Yes 12 1.5 Yes 24 0.88 Yes -24 0.91 Yes 46 95.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 26862227 - NR_073136 HPS4 1 0.59 0.22 14 0.49 80.37 27 6.32 Yes 76 -3.57 No 0 0 No -26 0.82 Yes 44 64.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 18302190 - NM_181508 HPS5 1 2.06 1.11 48 4.61 83.43 55 7.08 Yes 42 0.65 No 31 0.49 Yes -31 0.4 No 39 61.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 18305504 - NM_181508 HPS5 1 0.28 0.18 11 -3.42 0 29 6.39 Yes 16 1.23 Yes 0 0 No -28 0.86 Yes 42 86.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 18305509 - NM_181508 HPS5 1 0.41 0.26 17 5.15 77.51 24 6.03 Yes 11 1.23 Yes 0 0 No -23 0.86 Yes 47 88.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 18306553 - NM_181508 HPS5 1 0.45 0.33 12 2.09 73.99 24 4.86 No 11 0.25 No 0 0 No -27 0.61 No 47 55.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 18317649 - NM_181508 HPS5 1 0.2 0.17 10 4.45 85.94 27 5.47 No 23 1.32 Yes 26 0.88 Yes -26 0.83 Yes 44 73.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 18320225 - NM_181508 HPS5 1 0.14 0.11 7 10.04 81.5 23 6.38 Yes 10 1.6 Yes 0 0 No -22 0.72 Yes 48 56.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 18327036 - NM_181508 HPS5 1 0.1 0.13 8 2.65 0 27 5.27 No 14 1.1 Yes 0 0 No -30 0.6 No 40 62.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 18332476 - NM_181508 HPS5 1 0.18 0.15 10 -1.62 0 45 8.22 Yes 8 1.42 Yes 0 0 No -44 0.6 No 26 81.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 18339455 - NM_181508 HPS5 1 67.67 3.65 67 8.01 86.48 28 7.07 Yes 47 -2.96 No 28 0.68 Yes -28 0.69 Yes 42 81.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 533359 - NM_005343 HRAS 1 28.78 33.53 72 8.4 85.39 20 5.73 Yes 7 2.42 Yes 23 0.91 Yes -23 0.93 Yes 47 86.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 20822080 - NM_022460 HS1BP3 1 9.62 1.22 46 7.37 90.02 27 5.3 No 14 1.66 Yes 26 0.92 Yes -26 0.92 Yes 44 87.63 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 20836333 - NM_022460 HS1BP3 1 1.1 0.13 7 7.92 81.3 21 5.72 Yes 62 0.24 No 0 0 No -20 0.72 Yes 50 65.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 20845256 - NM_022460 HS1BP3 1 1.08 0.13 9 -3.22 0 20 4.36 No 28 1.73 Yes 0 0 No -40 0.53 No 30 65.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 20846099 - NM_022460 HS1BP3 1 1.09 0.18 10 9.05 90.03 24 5.2 No 17 0.04 No 0 0 No -23 0.77 Yes 41 71.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 87424122 + NM_012262 HS2ST1 1 1.02 1.97 60 5.6 72.53 36 4.3 No 14 0.42 No 26 0.86 Yes -26 0.77 Yes 44 65.62 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 87453414 + NM_012262 HS2ST1 1 0.12 0.22 14 9.67 85.32 13 5.82 Yes 50 2.33 Yes 0 0 No -27 0.51 No 43 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 87564972 + NM_012262 HS2ST1 1 1.02 1.33 52 8.07 91 21 5.05 No 0 1.39 Yes 0 0 No -20 0.85 Yes 50 86.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 87570149 + NM_012262 HS2ST1 1 8.92 20.22 72 2.67 69.76 29 5.99 Yes 72 1.46 Yes 0 0 No -28 0.88 Yes 42 90.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 83842887 + NM_001537 HSBP1 1 0.03 0.11 7 -12.03 0 17 4.18 No 55 0.93 Yes 24 0.42 Yes -16 0.83 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 29141243 + NM_001318316 HSCB 1 2.93 0.15 8 10.97 93.95 32 5.69 Yes 19 0.44 No 31 0.88 Yes -31 0.75 Yes 39 74.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29144525 + NM_001318316 HSCB 1 0.42 0.26 14 1.77 0 47 6.76 Yes 67 1.13 Yes 0 0 No -40 0.36 No 31 58.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29144851 + NM_001318316 HSCB 1 1.53 1.07 43 6.85 82.39 34 7.6 Yes 21 1.28 Yes 0 0 No -33 0.89 Yes 37 93.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29147236 + NM_001318316 HSCB 1 0.23 0.15 11 1.82 0 11 4.12 No 18 0.58 No 0 0 No -30 0.92 Yes 40 95.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53459787 - NM_001037811 HSD17B10 1 0.09 0.26 17 5.34 88.56 33 9.91 Yes 20 1.75 Yes 20 0.64 Yes -28 0.52 No 38 66.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 88287308 - NM_016245 HSD17B11 1 0.96 0.35 19 3.95 71.45 31 5.96 Yes 63 0.94 Yes 0 0 No -30 0.87 Yes 40 94.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 88294465 - NM_016245 HSD17B11 1 0.54 0.24 13 3.67 84 15 3.62 No 2 1.5 Yes 26 0.67 Yes -23 0.61 No 47 64.76 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 88295567 - NM_016245 HSD17B11 1 0.73 0.36 20 6.95 71.85 25 5.72 Yes 12 1.19 Yes 24 0.94 Yes -24 0.94 Yes 46 94.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 43776422 + NM_016142 HSD17B12 1 1.43 2.39 51 8.63 84.69 32 5.91 Yes 2 0.55 No 31 0.9 Yes -31 0.88 Yes 39 86.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 43778259 + NM_016142 HSD17B12 1 0.12 0.19 12 4.77 82.38 62 7.88 Yes 11 0.47 No 0 0 No -27 0.39 No 44 46.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 43781784 + NM_016142 HSD17B12 1 0.12 0.22 10 9.77 90.86 36 6.93 Yes 42 1.71 Yes 0 0 No -35 0.89 Yes 35 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 43816997 + NM_016142 HSD17B12 1 0.19 0.32 18 8.08 92.43 30 7.35 Yes 69 0.5 No 0 0 No -29 0.93 Yes 41 92.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 43819872 + NM_016142 HSD17B12 1 2.13 3.75 70 3.61 81.3 46 9.79 Yes 33 1.78 Yes 0 0 No -45 0.87 Yes 25 95.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 43854058 + NM_016142 HSD17B12 1 0.04 0.15 10 10.05 83.83 25 3.38 No 6 1.54 Yes 0 0 No -28 0.56 No 42 60.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 43876266 + NM_016142 HSD17B12 1 0.05 0.19 8 -9.8 75.75 43 8.06 Yes 30 0.72 No 0 0 No -42 0.91 Yes 28 95.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 118811545 + NM_001199291 HSD17B4 1 0.07 0.13 7 5.97 83.81 21 5.2 No 24 0.71 No 0 0 No -20 0.82 Yes 50 86.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 118813113 + NM_001199291 HSD17B4 1 0.13 0.29 13 -11.54 0 17 5.98 Yes 32 0.76 No 0 0 No -26 0.67 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 118831410 + NM_001199291 HSD17B4 1 0.09 0.18 11 7.76 91.86 27 5.04 No 41 0.61 No 26 0.84 Yes -26 0.65 No 44 79.72 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 162762520 + NM_016371 HSD17B7 1 0.32 0.17 11 7.9 87.95 29 5.53 No 74 0.84 Yes 0 0 No -28 0.51 No 45 66.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 162765410 + NM_016371 HSD17B7 1 0.24 0.18 11 6.45 82.45 29 5.37 No 16 0.1 No 23 0.63 Yes -28 0.77 Yes 42 76.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 162767617 + NM_016371 HSD17B7 1 11.78 9.53 72 8.27 86.82 20 5.3 No 31 0.26 No 28 0.74 Yes -19 0.61 No 51 78.51 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 162772621 + NM_016371 HSD17B7 1 1.13 0.81 33 8 84.88 20 5.66 Yes 24 0.7 No 0 0 No -19 0.63 No 51 62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 162774038 + NM_016371 HSD17B7 1 0.44 0.36 21 -1.04 56.79 42 5.65 Yes 18 1.3 Yes 22 0.87 Yes -50 0.29 No 29 26.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 162775988 + NM_016371 HSD17B7 1 0.14 0.11 7 1.39 72.47 37 6.35 Yes 24 0.28 No 0 0 No -36 0.74 Yes 34 86.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 84172912 - NM_031463 HSDL1 1 1.07 0.14 9 8.13 72.82 42 7.2 Yes 47 2.33 Yes 22 0.64 Yes -41 0.83 Yes 29 90.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 115148547 + NM_032303 HSDL2 1 0.49 0.5 25 7.81 87.2 26 5.81 Yes 48 0.88 Yes 0 0 No -42 0.42 No 36 49.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 115156936 + NM_032303 HSDL2 1 0.17 0.19 13 7.89 85.1 26 8.53 Yes 13 0.71 No 0 0 No -25 0.47 No 42 50.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 115167909 + NM_032303 HSDL2 1 0.11 0.18 12 -4.89 0 14 3.87 No 25 1.67 Yes 0 0 No -38 0.65 No 32 71.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 115167912 + NM_032303 HSDL2 1 0.46 0.65 34 -5.12 0 17 4.18 No 28 1.67 Yes 0 0 No -41 0.65 No 29 67.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 115201022 + NM_032303 HSDL2 1 1.07 2.06 57 6.58 78.74 88 6.88 Yes 75 0.88 Yes 29 0.8 Yes -29 0.61 No 41 75.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 145516164 + NM_005526 HSF1 1 3.99 5.6 71 9.08 89.15 34 7.03 Yes 21 0.41 No 33 0.92 Yes -33 0.88 Yes 37 91.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145517143 + NM_005526 HSF1 1 0.27 0.4 23 11.4 88.27 37 8.6 Yes 24 0.19 No 36 0.71 Yes -36 0.68 Yes 34 79.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145521367 + NM_005526 HSF1 1 0.07 0.1 7 5.61 77.83 28 6.48 Yes 58 1.63 Yes 0 0 No -27 0.97 Yes 43 96.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145530233 + NM_005526 HSF1 1 0.53 0.72 32 7.27 85.38 20 6.94 Yes 74 0.29 No 0 0 No -20 0.68 Yes 50 76.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145531273 + NM_005526 HSF1 1 0.16 0.22 13 4.03 72.58 27 7.07 Yes 14 0.67 No 0 0 No -26 0.64 No 44 55.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145535398 + NM_005526 HSF1 1 0.07 0.18 11 2.16 76.57 21 4.69 No 8 0.25 No 0 0 No -20 0.84 Yes 50 72.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145535827 + NM_005526 HSF1 1 0.47 0.53 24 7.4 78.4 25 5.92 Yes 33 1.58 Yes 24 0.8 Yes -24 0.62 No 46 57.66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 145536313 + NM_005526 HSF1 1 7.79 7.13 71 10.13 90.41 30 7.07 Yes 55 0.16 No 30 0.73 Yes -30 0.92 Yes 40 87.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145537792 + NM_005526 HSF1 1 0.33 0.4 23 -4.86 0 24 8.56 Yes 11 1.33 Yes 27 0.65 Yes -23 0.69 Yes 47 50.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 145537795 + NM_005526 HSF1 1 4.07 4.89 71 -9.22 0 18 4.06 No 14 1.34 Yes 27 0.65 Yes -26 0.63 No 44 40.41 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 145537811 + NM_005526 HSF1 1 0.33 0.42 26 1.33 69.57 11 5 No 30 1.33 Yes 0 0 No -42 0.78 Yes 61 24.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 122751137 + NM_004506 HSF2 1 1.06 0.17 11 10.54 88.97 32 7.26 Yes 43 1.21 Yes 0 0 No -31 0.76 Yes 39 71.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 122751137 + NM_004506 HSF2 1 2.3 0.43 23 10.54 88.97 32 7.26 Yes 43 1.21 Yes 0 0 No -31 0.76 Yes 39 71.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 122753017 + NM_004506 HSF2 1 0.22 0.18 11 9.7 90.61 44 7.25 Yes 31 0.87 Yes 0 0 No -28 0.78 Yes 42 90.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16265211 + NM_001291274 HSH2D 1 0.79 0.76 37 0.98 67.82 30 5.48 No 67 1.05 Yes 26 0.9 Yes -29 0.41 No 47 46.38 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 16265260 + NM_001291274 HSH2D 1 0.79 0.76 34 5.39 74.69 31 5.83 Yes 66 0.89 Yes 0 0 No -30 0.53 No 43 58.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 16266451 + NM_001291274 HSH2D 1 17.68 22.75 72 3.97 84.41 34 5.83 Yes 76 -3.93 No 24 0.53 Yes -32 0.65 No 38 72.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 16266476 + NM_001291274 HSH2D 1 0.3 0.39 22 2.01 70.88 28 5.29 No 15 -0.22 No 0 0 No -27 0.79 Yes 13 76.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 16267370 + NM_001291274 HSH2D 1 0.27 0.36 18 2.99 70.42 31 5.32 No 36 0.48 No 0 0 No -24 0.7 Yes 46 87.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 102548605 - NM_001017963 HSP90AA1 1 0 0.1 7 -7.89 71.61 18 5.93 Yes 5 2.2 Yes 0 0 No -24 0.35 No 46 49.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 102548732 - NM_001017963 HSP90AA1 1 0.02 0.93 40 1.5 69.16 27 7.48 Yes 14 1.24 Yes 0 0 No -26 0.78 Yes 44 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102549530 - NM_001017963 HSP90AA1 1 0.02 1.17 45 5.12 75.8 21 4.87 No 74 1.72 Yes 0 0 No -20 0.85 Yes 50 76.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102550048 - NM_001017963 HSP90AA1 1 0.02 1.26 43 -5.09 0 18 4.47 No 57 1.91 Yes 21 0.72 Yes -21 0.73 Yes 28 80.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 102550063 - NM_001017963 HSP90AA1 1 0 0.14 8 8.68 95.08 28 5.83 Yes 42 1.93 Yes 21 0.72 Yes -27 0.81 Yes 43 88.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 102550330 - NM_001017963 HSP90AA1 1 0 0.22 13 -4.3 0 23 4.98 No 10 0.48 No 27 0.92 Yes -22 0.61 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 102550346 - NM_001017963 HSP90AA1 1 0 0.13 8 1.78 65.51 25 5.57 Yes 69 0.07 No 27 0.92 Yes -24 0.55 No 43 52.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 102550921 - NM_001017963 HSP90AA1 1 0 0.28 8 4.43 68.82 59 7.32 Yes 74 0.78 Yes 21 0.89 Yes -24 0.75 Yes 46 54.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 102567509 - NM_001017963 HSP90AA1 1 12.82 0.54 29 7.68 83.58 41 5.77 Yes 55 0.8 Yes 0 0 No -23 0.46 No 44 47.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 44216014 + NM_001271969 HSP90AB1 1 3.63 0.82 32 2.35 69.06 26 5.89 Yes 13 0.51 No 0 0 No -25 0.7 Yes 45 83.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 44216079 + NM_001271969 HSP90AB1 1 4.63 0.97 38 7.49 75.59 30 6.04 Yes 9 0.24 No 0 0 No -29 0.39 No 41 56.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 44216332 + NM_001271969 HSP90AB1 1 0.96 0.19 11 2.63 56.79 32 5.66 Yes 52 1.15 Yes 23 0.93 Yes -31 0.78 Yes 39 64.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 44216366 + NM_001271969 HSP90AB1 1 24804.58 4178.96 72 5.04 82.4 19 4.38 No 53 0.44 No 23 0.93 Yes -18 0.62 No 52 69.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 44216474 + NM_001271969 HSP90AB1 1 0.56 0.11 7 3.71 76.36 37 6.75 Yes 24 1.11 Yes 0 0 No -27 0.84 Yes 43 78.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 44217441 + NM_001271969 HSP90AB1 1 1 43.86 72 4.11 68.45 10 5.38 No 51 -3.98 No 0 0 No -22 0.34 No 48 57.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 44218036 + NM_001271969 HSP90AB1 1 0 0.17 10 -7.67 0 16 4.06 No 18 1.82 Yes 0 0 No -30 0.86 Yes 40 89.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 44219845 + NM_001271969 HSP90AB1 1 0.01 0.35 18 -0.65 71.43 21 4.9 No 70 0.71 No 0 0 No -20 0.95 Yes 50 61.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 44221199 + NM_001271969 HSP90AB1 1 0.05 1.93 57 -1.32 67.75 22 6.89 Yes 69 -2.19 No 22 0.95 Yes -21 0.77 Yes 49 62.99 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 44221237 + NM_001271969 HSP90AB1 1 0 0.14 8 -3.36 0 20 4.5 No 22 0.55 No 0 0 No -34 0.9 Yes 36 91.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 104325488 + NM_003299 HSP90B1 1 0.32 8.36 72 9.48 82.4 27 5.05 No 14 0.88 Yes 32 0.82 Yes -32 0.82 Yes 38 81.49 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 104326056 + NM_003299 HSP90B1 1 0.03 0.78 32 -7.63 80.73 17 7.36 Yes 4 1.63 Yes 0 0 No -21 0.9 Yes 49 90.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 104326058 + NM_003299 HSP90B1 1 0.03 0.72 34 -9.89 0 19 7.49 Yes 6 1.61 Yes 0 0 No -23 0.9 Yes 47 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 104326401 + NM_003299 HSP90B1 1 0.01 0.35 20 10.35 77.13 33 6.24 Yes 20 0.17 No 0 0 No -32 0.71 Yes 38 78.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 104326646 + NM_003299 HSP90B1 1 0.01 0.35 19 4.81 77.69 26 6.2 Yes 58 1.06 Yes 0 0 No -25 0.81 Yes 45 89.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 104326699 + NM_003299 HSP90B1 1 0.03 1.06 43 -9.3 67.98 31 6.35 Yes 18 1.43 Yes 0 0 No -30 0.64 No 40 71.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 104327742 + NM_003299 HSP90B1 1 0.01 0.25 12 -4.16 0 12 4.24 No 59 0.37 No 0 0 No -42 0.64 No 28 59.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 104335192 + NM_003299 HSP90B1 1 0 0.15 10 -6.07 0 29 5.22 No 12 0.41 No 0 0 No -24 0.52 No 42 54.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 104335408 + NM_003299 HSP90B1 1 0.03 1.24 50 -17.13 0 24 5.83 Yes 11 1.3 Yes 0 0 No -23 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 104337311 + NM_003299 HSP90B1 1 0.13 5.22 68 6.38 81.06 35 8.17 Yes 7 0.19 No 0 0 No -25 0.48 No 45 36.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 104337524 + NM_003299 HSP90B1 1 0.01 0.24 17 -3.08 0 12 4.24 No 45 1.66 Yes 0 0 No -38 0.73 Yes 32 84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 104338810 + NM_003299 HSP90B1 1 0.01 0.21 14 8.24 88.69 26 6.28 Yes 45 0.98 Yes 0 0 No -26 0.46 No 49 53.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 104339978 + NM_003299 HSP90B1 1 0.01 0.24 7 3.79 78.4 62 6.87 Yes 4 1.26 Yes 0 0 No -54 0.64 No 16 81.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 104340567 + NM_003299 HSP90B1 1 0.01 0.33 19 -1.71 0 31 5.74 Yes 18 0.53 No 0 0 No -30 0.87 Yes 40 87.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 104340569 + NM_003299 HSP90B1 1 0.01 0.17 10 -22.18 0 9 3.87 No 20 0.52 No 0 0 No -32 0.86 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 15753733 - NM_006948 HSPA13 1 0.14 0.13 8 6.4 92.19 49 8.23 Yes 36 0.46 No 0 0 No -33 0.54 No 37 65.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 15755139 - NM_006948 HSPA13 1 0.21 0.18 10 5.61 84.78 23 5 No 16 -1.45 No 0 0 No -22 0.95 Yes 48 96.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 14883164 + NM_016299 HSPA14 1 1.58 1.6 51 10.27 94.52 15 6.61 Yes 61 1.68 Yes 26 0.69 Yes -26 0.71 Yes 44 61.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 14884132 + NM_016299 HSPA14 1 67.43 65.1 72 8.15 82.26 27 6.02 Yes 14 1.69 Yes 26 0.82 Yes -27 0.66 No 30 75.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 14885369 + NM_016299 HSPA14 1 4.45 4.64 68 10.46 96.41 44 4.87 No 61 0.93 Yes 23 0.86 Yes -23 0.63 No 47 83.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 14891431 + NM_016299 HSPA14 1 5.13 5.13 71 -0.43 64.13 37 7.04 Yes 16 0.96 Yes 28 0.79 Yes -36 0.71 Yes 34 93.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 14893276 + NM_016299 HSPA14 1 1.45 1.22 46 4.06 73.09 20 5.7 Yes 21 0.61 No 0 0 No -33 0.39 No 37 43.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 14894387 + NM_016299 HSPA14 1 0.3 0.22 14 4.39 76.88 23 5.28 No 33 1.24 Yes 0 0 No -42 0.36 No 32 63.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 14902485 + NM_016299 HSPA14 1 0.1 0.1 7 3.03 81.92 20 4.69 No -3 0.53 No 0 0 No -19 0.88 Yes 51 91.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 14909783 + NM_016299 HSPA14 1 1.88 1.61 54 7.14 87.65 20 4.9 No 7 0.44 No 0 0 No -19 0.96 Yes 51 97.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 132397507 + NM_002154 HSPA4 1 0.04 0.21 14 6.77 85.02 31 7.87 Yes 18 1.52 Yes 0 0 No -30 0.94 Yes 40 95.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 132403222 + NM_002154 HSPA4 1 0.03 0.14 9 3.96 73.61 24 6.4 Yes 38 1.45 Yes 0 0 No -23 0.9 Yes 47 90.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 132406042 + NM_002154 HSPA4 1 0.02 0.18 10 -3.34 0 25 5.09 No 54 0.37 No 25 0.46 Yes -11 0.36 No 59 27.13 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 132412321 + NM_002154 HSPA4 1 0.02 0.17 10 0.85 69.75 51 6.78 Yes 70 1.78 Yes 20 0.67 Yes -23 0.46 No 38 53.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 132425316 + NM_002154 HSPA4 1 0.28 1.15 47 4.5 81.5 20 5 No 49 1.02 Yes 0 0 No -19 0.58 No 51 65.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 132426889 + NM_002154 HSPA4 1 0.01 0.13 8 0.48 0 37 6.65 Yes 49 0.48 No 0 0 No -41 0.93 Yes 29 92.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 132428394 + NM_002154 HSPA4 1 2.52 17.67 72 3.12 79.17 35 5.55 No 4 1.2 Yes 0 0 No -21 0.65 No 49 56.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 132434201 + NM_002154 HSPA4 1 0.02 0.13 7 4.08 87 33 8 Yes 20 1.58 Yes 0 0 No -32 0.93 Yes 38 94.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 132437429 + NM_002154 HSPA4 1 0.03 0.31 17 0.76 65.85 33 6.14 Yes 51 0.37 No 24 0.5 Yes -29 0.41 No 48 30.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 132437483 + NM_002154 HSPA4 1 0.11 0.99 38 4.78 0 15 4.56 No 57 0.18 No 0 0 No -23 0.35 No 52 47.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 132439559 + NM_002154 HSPA4 1 0.04 0.33 18 -10.15 69.37 22 6.32 Yes 9 1.14 Yes 0 0 No -21 0.81 Yes 49 78.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 132439565 + NM_002154 HSPA4 1 0.03 0.22 12 -16.26 0 13 3.87 No 15 1.13 Yes 0 0 No -27 0.42 No 43 80.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 132439902 + NM_002154 HSPA4 1 0.13 0.82 37 -5.73 0 13 2.98 No 5 0.59 No 24 0.49 Yes -28 0.59 No 42 51.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 128725474 + NM_001317381 HSPA4L 1 0.09 0.13 7 5.26 63.23 54 6.46 Yes 16 0.19 No 0 0 No -28 0.9 Yes 42 90.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 128726918 + NM_001317381 HSPA4L 1 0.1 0.11 8 4.73 70.48 33 6.08 Yes 20 0.94 Yes 0 0 No -32 0.72 Yes 38 85.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128729719 + NM_001317381 HSPA4L 1 0.27 0.18 11 5.92 87.56 35 6.73 Yes 76 -4.23 No 0 0 No -20 0.48 No 40 54.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 128730193 + NM_001317381 HSPA4L 1 0.62 0.42 26 0.59 57.44 88 6.41 Yes 75 0.6 No 0 0 No -33 0.62 No 37 67.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 128730378 + NM_001317381 HSPA4L 1 0.22 0.15 9 3.21 77.12 24 4.86 No 61 -4.67 No 0 0 No -23 0.8 Yes 47 85.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127999348 - NM_005347 HSPA5 1 0.01 0.25 13 7.07 72.09 37 7.79 Yes 24 1.52 Yes 0 0 No -36 0.89 Yes 34 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128001127 - NM_005347 HSPA5 1 0 0.11 7 -8.79 0 14 4.24 No 51 -4.13 No 24 0.85 Yes -18 0.65 No 57 51.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 128001486 - NM_005347 HSPA5 1 0.02 0.68 33 3.67 71.46 19 8.78 Yes 48 0.12 No 0 0 No -25 0.94 Yes 45 95.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 128003095 - NM_005347 HSPA5 1 0.02 0.53 24 6.2 80.81 32 7.2 Yes 19 0.43 No 0 0 No -31 0.94 Yes 39 57.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 122929211 - NM_006597 HSPA8 1 0 0.21 11 0.52 0 20 4.55 No 7 0.06 No 20 0.92 Yes -19 0.6 No 51 72.82 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 122930471 - NM_006597 HSPA8 1 0.01 0.76 26 5.78 83.47 20 5.1 No 7 1.39 Yes 19 0.88 Yes -19 0.82 Yes 51 90.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 122931482 - NM_006597 HSPA8 1 0.01 0.57 26 4.01 72.6 30 5.75 Yes 26 0.89 Yes 0 0 No -27 0.28 No 16 60.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 122931967 - NM_006597 HSPA8 1 0.05 3 69 7.66 80.39 39 7.47 Yes 26 0.44 No 27 0.57 Yes -23 0.48 No 32 49.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 122932055 - NM_006597 HSPA8 1 0.01 0.57 26 3.18 77.21 19 6.02 Yes 6 0.42 No 20 0.83 Yes -22 0.56 No 48 54.52 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 137901871 - NM_004134 HSPA9 1 0.01 0.19 14 3.01 0 40 6.78 Yes 27 1.78 Yes 0 0 No -39 0.93 Yes 31 92.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137902404 - NM_004134 HSPA9 1 0.01 0.17 9 2.05 0 42 8.26 Yes 29 0.7 No 37 0.48 Yes -41 0.85 Yes 29 94.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137903411 - NM_004134 HSPA9 1 0.02 0.31 18 -13.38 0 24 4.64 No 35 0.76 No 0 0 No -26 0.39 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 137904757 - NM_004134 HSPA9 1 0.02 0.33 17 3.8 83.6 20 4.69 No 29 0.79 Yes 22 0.93 Yes -19 0.79 Yes 51 89.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137909535 - NM_004134 HSPA9 1 0.01 0.14 8 -2.4 0 41 4.94 No 76 0.64 No 0 0 No -28 0.75 Yes 42 75.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 137909811 - NM_004134 HSPA9 1 0.1 0.56 30 2.96 0 27 5.36 No 18 1.43 Yes 0 0 No -26 0.72 Yes 44 72.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137909859 - NM_004134 HSPA9 1 0.06 0.39 22 11.41 96.35 29 5.38 No 37 0.74 No 28 0.77 Yes -28 0.53 No 42 61.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 54394109 - NM_001316935 HSPB11 1 1.18 5.57 72 -1.04 0 36 6.91 Yes 23 1.49 Yes 0 0 No -35 0.77 Yes 35 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 54395617 - NM_001316935 HSPB11 1 0.05 0.24 15 11.54 95.02 39 6.1 Yes 26 1.67 Yes 0 0 No -24 0.84 Yes 46 56.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 122473919 - NM_024610 HSPBAP1 1 2.21 0.35 20 8.19 89.47 26 5.66 Yes 13 -0.38 No 25 0.85 Yes -25 0.84 Yes 45 77.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 122477701 - NM_024610 HSPBAP1 1 8.18 1.49 47 3.75 84.95 25 5.2 No 75 0.1 No 24 0.92 Yes -22 0.53 No 50 54.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 122480820 - NM_024610 HSPBAP1 1 6.1 0.6 23 10.67 94.18 23 6.48 Yes 10 1.58 Yes 22 0.84 Yes -22 0.87 Yes 48 90.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 122489541 - NM_024610 HSPBAP1 1 1.25 0.25 16 4.11 0 41 5.84 Yes 28 0.9 Yes 0 0 No -40 0.62 No 30 62.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 122491321 - NM_024610 HSPBAP1 1 0.6 0.14 8 6.98 84.57 72 7.49 Yes 36 1.31 Yes 0 0 No -30 0.47 No 34 66.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 122505338 - NM_024610 HSPBAP1 1 1.8 0.22 14 5.78 75.66 34 7.57 Yes 21 1.39 Yes 26 0.76 Yes -33 0.65 No 37 82.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 55776177 - NM_001130106 HSPBP1 1 0.17 0.18 11 5.81 84.26 21 5.57 Yes 4 0.52 No 0 0 No -20 0.54 No 29 74.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 55776736 - NM_001130106 HSPBP1 1 14.05 11.76 72 2.75 0 16 4.47 No 23 0.46 No 26 0.89 Yes -47 0.41 No 44 60.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 55776736 - NM_001130106 HSPBP1 1 0.4 0.35 20 2.75 0 16 4.47 No 23 0.46 No 26 0.89 Yes -47 0.41 No 44 60.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 55776747 - NM_001130106 HSPBP1 1 8.61 7.42 71 -0.47 0 16 4.47 No 12 0.46 No 26 0.89 Yes -36 0.82 Yes 34 49.96 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 55777363 - NM_001130106 HSPBP1 1 0.11 0.19 11 8.85 83.92 11 6.32 Yes -2 1.42 Yes 22 0.89 Yes -31 0.52 No 47 49.85 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 55784200 - NM_001130106 HSPBP1 1 0.48 0.31 19 3.01 0 50 8.21 Yes 37 1.13 Yes 0 0 No -49 0.67 Yes 21 76.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55789149 - NM_001130106 HSPBP1 1 1.12 0.61 28 -14.57 0 15 2.98 No 47 -1.44 No 20 0.5 Yes -50 0.5 No 23 35.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 55790970 - NM_001130106 HSPBP1 1 0.36 0.29 19 -0.71 68.05 38 7.38 Yes 25 2.01 Yes 0 0 No -37 0.94 Yes 33 95.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55791074 - NM_001130106 HSPBP1 1 11.34 10.43 71 1.13 77.56 18 5.83 Yes 5 1.09 Yes 27 0.58 Yes -23 0.55 No 53 53.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 198352104 - NM_199440 HSPD1 1 0.06 1.25 47 2.24 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.59 No 51 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 198352107 - NM_199440 HSPD1 1 0.01 0.25 15 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -27 0.37 No 54 69.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 198352755 - NM_199440 HSPD1 1 0.03 0.69 30 -3.56 0 15 3.87 No 8 0.93 Yes 0 0 No -31 0.77 Yes 39 58.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 198355386 - NM_199440 HSPD1 1 0 0.11 7 3.87 79.21 21 7.21 Yes 8 1.16 Yes 0 0 No -20 0.45 No 50 58.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 198355389 - NM_199440 HSPD1 1 0.03 1.01 38 7.05 91.83 18 7 Yes 5 1.19 Yes 0 0 No -30 0.52 No 44 69.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 198355767 - NM_199440 HSPD1 1 0.01 0.26 13 2.77 64.33 29 6.36 Yes 16 1.18 Yes 0 0 No -37 0.76 Yes 33 77.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 198356368 - NM_199440 HSPD1 1 0 0.17 11 8.49 86.75 26 6.01 Yes 13 0.47 No 0 0 No -25 0.61 No 45 42.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 198357724 - NM_199440 HSPD1 1 0 0.13 8 2.23 0 29 5.25 No 16 1.37 Yes 0 0 No -28 0.78 Yes 42 86.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 198359452 - NM_199440 HSPD1 1 0 0.13 8 -11.48 65.21 33 5.7 Yes 49 1.13 Yes 0 0 No -27 0.79 Yes 43 37.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 198359476 - NM_199440 HSPD1 1 0 0.1 7 -7.34 0 17 5.2 No 25 1.14 Yes 0 0 No -29 0.42 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 198359496 - NM_199440 HSPD1 1 0.01 0.53 29 6.26 80.91 18 5.48 No 5 1.15 Yes 22 0.66 Yes -17 0.56 No 53 53.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 198360089 - NM_199440 HSPD1 1 0.01 0.25 14 -3.72 0 19 4.58 No 68 0.01 No 0 0 No -18 0.5 No 36 43.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 198360107 - NM_199440 HSPD1 1 0 0.11 7 -3.56 0 14 5.16 No 70 0.31 No 22 0.74 Yes -13 0.24 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 198360116 - NM_199440 HSPD1 1 0 0.11 7 -6.15 0 17 5.27 No 61 0.3 No 22 0.74 Yes -8 0.42 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 198365423 + NM_002157 HSPE1 1 0.02 0.15 8 8.72 89.86 15 5.39 No 2 1.66 Yes 0 0 No -22 0.67 Yes 48 55.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 198365469 + NM_002157 HSPE1 1 0.03 0.25 14 -0.71 72.8 29 7.38 Yes 48 1.62 Yes 0 0 No -28 0.53 No 44 66.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 198366207 + NM_002157 HSPE1 1 0.02 0.51 31 7.99 80.17 18 5.55 No 38 0.92 Yes 0 0 No -26 0.52 No 44 50.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 198367949 + NM_002157 HSPE1 1 0.05 0.76 35 4.63 83.93 26 5.08 No 25 1.35 Yes 0 0 No -25 0.83 Yes 28 49.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 31711678 - NM_001286505 HSPH1 1 0.06 0.67 22 0.5 58.51 14 3.48 No -4 0.11 No 24 0.91 Yes -18 0.66 Yes 52 35.81 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr13 31712730 - NM_001286505 HSPH1 1 0.07 0.57 21 4.84 74.87 29 4.96 No 61 -4.06 No 20 0.88 Yes -21 0.62 No 49 70.5 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr13 31713036 - NM_001286505 HSPH1 1 0.01 0.14 9 -7.17 0 31 5.93 Yes 11 0.52 No 0 0 No -23 0.45 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 31713037 - NM_001286505 HSPH1 1 0.02 0.19 13 -11.23 0 30 5.88 Yes 10 0.51 No 0 0 No -22 0.4 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 31713225 - NM_001286505 HSPH1 1 0.02 0.21 13 -1.2 67.5 17 4.03 No 31 0.89 Yes 0 0 No -22 0.6 No 27 50.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 31714517 - NM_001286505 HSPH1 1 0.03 0.22 12 7.05 86.14 35 7.47 Yes 22 0.98 Yes 0 0 No -34 0.55 No 30 80.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 31714689 - NM_001286505 HSPH1 1 0.05 0.36 19 11.07 86.44 22 5.73 Yes 9 0.79 Yes 0 0 No -21 0.68 Yes 49 74.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 31717986 - NM_001286505 HSPH1 1 0.01 0.1 7 2.16 66.04 21 6.24 Yes 8 0.08 No 0 0 No -20 0.66 No 50 55.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 31718059 - NM_001286505 HSPH1 1 0.01 0.1 7 -10.89 0 54 7.41 Yes 49 -2.26 No 0 0 No -30 0.79 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 31718060 - NM_001286505 HSPH1 1 0.03 0.24 13 -10.82 0 53 7.34 Yes 48 -2.25 No 0 0 No -29 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 31721747 - NM_001286505 HSPH1 1 0.05 0.36 22 7.86 82.93 14 6.67 Yes 1 1.87 Yes 0 0 No -19 0.47 No 51 54.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 31722228 - NM_001286505 HSPH1 1 0.01 0.11 7 -12.53 0 27 6.88 Yes 14 1.59 Yes 0 0 No -25 0.63 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 31722569 - NM_001286505 HSPH1 1 0.02 0.19 11 4.63 89.29 25 4.86 No 61 1.28 Yes 0 0 No -25 0.68 Yes 51 49.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 31724335 - NM_001286505 HSPH1 1 0.05 0.54 20 0.15 61.06 18 6.22 Yes 5 0.95 Yes 23 0.89 Yes -18 0.51 No 36 61.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 135584938 + NM_014500 HTATSF1 1 0.12 0.18 12 -17.5 62.88 30 7.53 Yes 17 1.33 Yes 0 0 No -29 0.59 No 41 56.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 135586476 + NM_014500 HTATSF1 1 0.06 0.11 7 5.78 71.17 23 6.73 Yes 10 1.04 Yes 0 0 No -22 0.47 No 48 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 135586677 + NM_014500 HTATSF1 1 0.93 0.9 42 5.96 88.92 22 5.1 No 9 1.32 Yes 0 0 No -21 0.8 Yes 49 95.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 3104316 + NM_002111 HTT 1 0.63 1.38 50 5.63 81.75 21 5.92 Yes 43 0.73 No 0 0 No -20 0.79 Yes 50 69.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 3104332 + NM_002111 HTT 1 2.94 6.26 71 4.22 73.53 26 4.97 No -3 1.5 Yes 0 0 No -25 0.8 Yes 34 78.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 3115081 + NM_002111 HTT 1 0.09 0.18 10 3.28 0 33 6.03 Yes 12 0.91 Yes 0 0 No -32 0.88 Yes 38 93.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 3123716 + NM_002111 HTT 1 0.1 0.13 8 9.93 76.91 41 7.63 Yes 28 1.51 Yes 0 0 No -40 0.66 No 30 89.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 3125976 + NM_002111 HTT 1 0.98 1.46 53 5.82 81.92 20 5.88 Yes 7 2.41 Yes 0 0 No -19 0.6 No 41 58.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 3131689 + NM_002111 HTT 1 0.18 0.43 24 5.49 82.19 24 4.67 No 59 -5.29 No 0 0 No -23 0.79 Yes 47 68.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 3133687 + NM_002111 HTT 1 0.08 0.17 8 7.46 77.28 30 5.91 Yes 17 0.34 No 0 0 No -29 0.68 Yes 41 75.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 3134507 + NM_002111 HTT 1 0.31 0.33 21 -1.41 0 19 3.69 No 45 1.39 Yes 30 0.47 Yes -43 0.7 Yes 52 74.44 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 3144471 + NM_002111 HTT 1 0.74 1.56 53 -0.63 0 16 4.47 No 67 1.18 Yes 23 0.76 Yes -31 0.32 No 39 59.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 3144719 + NM_002111 HTT 1 0.06 0.14 7 7.43 88.74 24 4.58 No 65 0.94 Yes 0 0 No -23 0.96 Yes 47 96.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 3146504 + NM_002111 HTT 1 0.1 0.21 11 5.14 69.32 53 8.07 Yes 40 0.91 Yes 0 0 No -42 0.41 No 28 80.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 3149735 + NM_002111 HTT 1 0.21 0.49 25 -0.53 0 26 6.08 Yes 13 1 Yes 0 0 No -25 0.85 Yes 45 79.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 3150058 + NM_002111 HTT 1 0.08 0.14 10 0.22 64.21 52 7.87 Yes 39 1.44 Yes 0 0 No -51 0.45 No 19 85.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 3180100 + NM_002111 HTT 1 0.04 0.1 7 6.28 72.09 61 8.63 Yes 8 0.25 No 0 0 No -23 0.74 Yes 42 45.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 3184110 + NM_002111 HTT 1 0.59 1.25 47 9.44 90.13 16 5.48 No 37 0.83 Yes 0 0 No -34 0.68 Yes 47 66.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 3199219 + NM_002111 HTT 1 0.08 0.15 10 9.13 83.83 29 6.67 Yes 16 2.64 Yes 0 0 No -28 0.7 Yes 42 73.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 3199367 + NM_002111 HTT 1 0.1 0.18 11 9.3 84.69 41 5.73 Yes 28 1.39 Yes 0 0 No -32 0.73 Yes 38 86.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 3204703 + NM_002111 HTT 1 13.68 19.24 72 3.77 77.69 21 5.25 No 75 -5.49 No 21 0.89 Yes -23 0.54 No 47 53.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 3204708 + NM_002111 HTT 1 0.96 1.35 55 3.51 0 26 5.63 Yes 63 -4.19 No 21 0.89 Yes -28 0.5 No 42 50.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 3205736 + NM_002111 HTT 1 0.53 0.82 37 2.27 73.87 27 6.09 Yes 36 1.22 Yes 0 0 No -26 0.68 Yes 44 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 3209012 + NM_002111 HTT 1 2.51 5.85 72 -1.65 0 25 7.07 Yes 12 1.88 Yes 19 0.77 Yes -24 0.82 Yes 46 77.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 3210529 + NM_002111 HTT 1 0.66 1.67 53 6.77 82.54 25 5.47 No 42 0.94 Yes 25 0.62 Yes -55 0.27 No 15 67.72 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 3215216 + NM_002111 HTT 1 0.18 0.33 17 8.46 86.72 30 5.07 No 3 0.41 No 0 0 No -29 0.83 Yes 41 76.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 3215348 + NM_002111 HTT 1 0.12 0.22 12 2.11 74.12 19 4.7 No 70 -1.02 No 0 0 No -26 0.64 No 52 59.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 3215714 + NM_002111 HTT 1 0.32 0.6 32 2 72.26 33 6.24 Yes 37 1.18 Yes 0 0 No -32 0.44 No 21 58.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 3215738 + NM_002111 HTT 1 0.11 0.24 15 2.76 84.42 16 4.69 No 61 1.17 Yes 0 0 No -15 0.42 No 55 59.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 3220214 + NM_002111 HTT 1 0.7 1.22 49 -2.49 50.2 34 6.62 Yes 21 0.63 No 0 0 No -20 0.3 No 37 30.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 3232693 + NM_002111 HTT 1 0.41 0.56 29 7.68 89.36 33 4.5 No 20 0.43 No 0 0 No -21 0.61 No 49 67.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 3240255 + NM_002111 HTT 1 0.11 0.15 8 8.73 89.84 18 5.36 No 66 -1.31 No 0 0 No -20 0.56 No 50 77.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 3241162 + NM_002111 HTT 1 0.27 0.38 17 6.42 84.9 21 4.9 No 47 -0.49 No 0 0 No -22 0.75 Yes 50 66.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 48013701 - NM_004507 HUS1 1 0.24 0.22 13 8.43 86.62 16 6.16 Yes 3 1.11 Yes 0 0 No -20 0.56 No 50 68.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 48016000 - NM_004507 HUS1 1 0.39 0.21 12 4.55 85.24 14 4.28 No 74 0.61 No 0 0 No -23 0.94 Yes 47 94.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53560372 - NM_031407 HUWE1 1 0.04 0.14 8 -9.32 0 21 7.47 Yes 8 1.65 Yes 0 0 No -31 0.59 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 53561573 - NM_031407 HUWE1 1 0.1 0.4 21 5.92 86.21 37 4.65 No 9 0.79 Yes 0 0 No -31 0.41 No 49 54.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 53563452 - NM_031407 HUWE1 1 0.21 0.46 19 1.92 71.56 48 7.56 Yes 35 0.12 No 0 0 No -41 0.5 No 29 67.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 53565390 - NM_031407 HUWE1 1 0.05 0.19 14 5.12 74.45 21 5.74 Yes 40 0.84 Yes 0 0 No -20 0.81 Yes 50 88.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53565414 - NM_031407 HUWE1 1 0.12 0.53 23 0.08 75.77 29 6.74 Yes 16 0.87 Yes 0 0 No -29 0.87 Yes 41 69.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53573770 - NM_031407 HUWE1 1 0.24 0.72 33 2.91 73.18 22 5.1 No 74 0.71 No 0 0 No -43 0.69 Yes 27 93.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53576049 - NM_031407 HUWE1 1 0.1 0.36 19 3.83 79.71 12 5 No -1 0.34 No 0 0 No -18 0.69 Yes 52 75.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53576078 - NM_031407 HUWE1 1 0.21 0.75 28 1.38 70.19 18 4.9 No 35 -0.79 No 0 0 No -37 0.71 Yes 33 41.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 53579035 - NM_031407 HUWE1 1 0.06 0.17 12 6.87 80.34 55 7.51 Yes 32 1.41 Yes 0 0 No -44 0.58 No 26 89.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 53581046 - NM_031407 HUWE1 1 0.04 0.11 7 10.8 83.18 30 5.36 No 17 1.31 Yes 0 0 No -29 0.56 No 46 71.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 53587262 - NM_031407 HUWE1 1 0.06 0.29 15 4.57 87.2 20 4.66 No 27 0.44 No 0 0 No -19 0.75 Yes 51 81.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53587375 - NM_031407 HUWE1 1 1.34 6.74 72 3.7 81.67 29 7.39 Yes 16 2.33 Yes 0 0 No -28 0.76 Yes 42 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53587375 - NM_031407 HUWE1 1 0.1 0.5 22 3.7 81.67 29 7.39 Yes 16 2.33 Yes 0 0 No -28 0.76 Yes 42 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53588883 - NM_031407 HUWE1 1 0.15 0.63 29 -8.38 78.75 41 6.15 Yes 28 1.03 Yes 0 0 No -23 0.54 No 36 72.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 53589155 - NM_031407 HUWE1 1 0.03 0.14 8 -15.96 0 22 4.69 No 73 0.63 No 0 0 No -21 0.35 No 55 51.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 53589233 - NM_031407 HUWE1 1 0.02 0.1 7 -2.02 0 12 4.62 No 47 0.82 Yes 29 0.68 Yes -32 0.58 No 43 46.47 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 53595775 - NM_031407 HUWE1 1 0.14 0.35 20 9.05 81.43 27 5.38 No 14 0 No 0 0 No -29 0.66 No 41 87.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 53602176 - NM_031407 HUWE1 1 0.07 0.19 10 -2.24 0 9 3.87 No 15 0.08 No 0 0 No -27 0.87 Yes 43 94.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53602746 - NM_031407 HUWE1 1 36.63 72.92 72 8.85 91.82 38 5.16 No 13 0.72 No 0 0 No -25 0.88 Yes 45 78.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53604022 - NM_031407 HUWE1 1 0.22 0.67 31 1.12 0 9 3.87 No 23 1.68 Yes 0 0 No -35 0.92 Yes 35 90.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53611256 - NM_031407 HUWE1 1 0.13 0.44 24 8.15 87.77 18 4.83 No -1 1.2 Yes 27 0.6 Yes -27 0.89 Yes 43 77.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 53613879 - NM_031407 HUWE1 1 0.13 0.39 22 1.84 0 42 6.71 Yes 42 1.63 Yes 37 0.24 Yes -28 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 53614088 - NM_031407 HUWE1 1 0.34 0.86 39 7.76 89.02 19 4.76 No 32 -3.17 No 0 0 No -38 0.3 No 48 40.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 53629637 - NM_031407 HUWE1 1 0.05 0.18 10 5.22 89.17 36 6.17 Yes 66 -3.57 No 19 0.85 Yes -25 0.36 No 47 50.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 53640808 - NM_031407 HUWE1 1 0.05 0.17 8 7.8 97.39 33 6.34 Yes -1 0.44 No 0 0 No -25 0.5 No 47 72.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 53644375 - NM_031407 HUWE1 1 0.12 0.5 22 5.35 79.06 28 4.18 No 7 1.58 Yes 0 0 No -19 0.57 No 51 78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 53644399 - NM_031407 HUWE1 1 0.03 0.14 9 -4.55 0 12 4.24 No 27 1.16 Yes 0 0 No -39 0.8 Yes 31 89.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53652984 - NM_031407 HUWE1 1 1.64 1.9 60 1.84 0 9 3.87 No 7 0.88 Yes 0 0 No -25 0.75 Yes 45 61.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 53652990 - NM_031407 HUWE1 1 188.97 214.69 72 4.69 69.95 29 5.63 Yes 1 0.92 Yes 28 0.69 Yes -32 0.6 No 38 62.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 53656566 - NM_031407 HUWE1 1 0.05 0.15 10 -13.91 0 27 5.66 Yes 33 1.39 Yes 0 0 No -26 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 53656589 - NM_031407 HUWE1 1 3.13 9.17 72 3.89 77.04 23 6.16 Yes 10 1.38 Yes 24 0.89 Yes -22 0.92 Yes 48 92.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 53659516 - NM_031407 HUWE1 1 0.1 0.47 25 -16.12 0 27 6.26 Yes 14 1.28 Yes 0 0 No -26 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 53661249 - NM_031407 HUWE1 1 0.04 0.14 10 -4.1 76.44 27 6.69 Yes 70 1.48 Yes 0 0 No -26 0.62 No 44 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 53664307 - NM_031407 HUWE1 1 0.07 0.25 13 9.64 79.25 32 5.56 Yes 39 1.33 Yes 0 0 No -31 0.77 Yes 39 80.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53664336 - NM_031407 HUWE1 1 0.11 0.38 22 6.03 87.03 23 5.95 Yes 10 1.34 Yes 0 0 No -22 0.59 No 48 85.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 53667743 - NM_031407 HUWE1 1 0.06 0.19 13 13.05 91.54 36 6.4 Yes 32 0.18 No 0 0 No -31 0.42 No 34 47.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 53671133 - NM_031407 HUWE1 1 0.11 0.38 20 0.53 0 29 6.56 Yes 16 1.45 Yes 0 0 No -28 0.88 Yes 42 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53671138 - NM_031407 HUWE1 1 0.04 0.13 9 6.51 77.34 24 6.16 Yes 11 1.47 Yes 0 0 No -23 0.85 Yes 47 90.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53675182 - NM_031407 HUWE1 1 0.07 0.22 14 2.54 78.97 27 4.73 No 14 0.3 No 0 0 No -26 0.46 No 44 56.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 53675247 - NM_031407 HUWE1 1 0.1 0.4 22 4.19 0 10 4 No 58 1.44 Yes 0 0 No -26 0.59 No 44 41.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 53675563 - NM_031407 HUWE1 1 0.96 3.5 66 4.53 87.38 25 5.82 Yes 42 1.15 Yes 0 0 No -24 0.52 No 46 57.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 53675594 - NM_031407 HUWE1 1 0.55 2.01 54 11.45 88.27 24 6.28 Yes 11 1.17 Yes 0 0 No -23 0.64 No 46 81.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 53675945 - NM_031407 HUWE1 1 0.27 1 38 3.66 86.33 23 4.9 No 10 1.28 Yes 0 0 No -22 0.87 Yes 48 93.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53699542 - NM_031407 HUWE1 1 0.73 3.63 65 7.83 82.56 25 5.98 Yes 12 1 Yes 0 0 No -24 0.62 No 46 83.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 53704499 - NM_031407 HUWE1 1 0.45 2.38 59 3.59 0 19 4.23 No 6 0.08 No 0 0 No -18 0.7 Yes 52 82.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53706229 - NM_031407 HUWE1 1 0.43 2.28 61 11.87 92.68 25 5.4 No 23 1.24 Yes 0 0 No -24 0.74 Yes 46 76.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53711265 - NM_031407 HUWE1 1 2.9 2.08 61 11.87 89.53 25 4.38 No 12 0.38 No 0 0 No -27 0.88 Yes 43 91.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 111087303 - NM_032369 HVCN1 1 0.13 0.44 20 -4.58 0 15 4.36 No 69 0.28 No 24 0.77 Yes -38 0.53 No 20 66.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 111089092 - NM_032369 HVCN1 1 0.19 0.51 26 10.48 91.72 32 6.09 Yes 19 0.95 Yes 0 0 No -27 0.74 Yes 39 81.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 111098702 - NM_032369 HVCN1 1 0.12 0.24 13 7.32 86.96 26 5.81 Yes 13 0.46 No 0 0 No -25 0.75 Yes 46 54.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 111099250 - NM_032369 HVCN1 1 0.11 0.17 10 2.21 0 35 6.32 Yes 22 1.27 Yes 0 0 No -34 0.61 No 36 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 111104225 - NM_032369 HVCN1 1 0.53 0.68 34 11.62 92 36 7.03 Yes 23 1.81 Yes 0 0 No -39 0.66 No 31 81.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 111106140 - NM_032369 HVCN1 1 0.19 0.22 12 7.85 85.51 40 6.29 Yes 66 0.65 No 0 0 No -23 0.55 No 47 61.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 111109637 - NM_032369 HVCN1 1 0.98 1.14 47 7.18 81 27 6.32 Yes 14 0.97 Yes 0 0 No -26 0.89 Yes 44 93.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 111115007 - NM_032369 HVCN1 1 0.11 0.13 8 10.46 94.37 23 6.08 Yes 10 1.51 Yes 0 0 No -22 0.67 Yes 48 77.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 111115494 - NM_032369 HVCN1 1 0.98 1.21 48 6.84 69.57 31 4.97 No 60 0.47 No 0 0 No -26 0.85 Yes 40 72.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 111125859 - NM_032369 HVCN1 1 0.11 0.13 8 6.47 87.72 37 6.4 Yes 24 0.76 No 0 0 No -36 0.87 Yes 34 86.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43917703 - NM_001243526 HYI 1 0.91 0.13 8 -1.93 0 9 4.58 No 28 0.15 No 22 0.94 Yes -40 0.47 No 30 27.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 118916547 - NM_001130991 HYOU1 1 18.92 94.35 72 5.52 77.25 19 5.57 Yes 6 2.24 Yes 21 0.91 Yes -27 0.57 No 52 72.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 118917175 - NM_001130991 HYOU1 1 1.85 14.29 72 0.23 0 25 5.04 No 12 1.33 Yes 0 0 No -24 0.92 Yes 46 87.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118917442 - NM_001130991 HYOU1 1 0.06 0.4 22 5.06 72.44 29 5.29 No 27 0.98 Yes 0 0 No -26 0.71 Yes 44 50.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 118917506 - NM_001130991 HYOU1 1 0.03 0.22 11 -5.48 0 18 4.24 No 5 0.33 No 0 0 No -17 0.55 No 31 68.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118917544 - NM_001130991 HYOU1 1 0.34 2.17 66 6.86 69.68 9 5.6 Yes 66 -2.78 No 24 0.59 Yes -29 0.61 No 41 53.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 118919275 - NM_001130991 HYOU1 1 0.02 0.11 7 -11.13 0 44 6.93 Yes 31 1.83 Yes 0 0 No -27 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 118920060 - NM_001130991 HYOU1 1 0.05 0.33 19 4.87 0 31 5.66 Yes 58 1.25 Yes 0 0 No -30 0.92 Yes 40 96.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118920064 - NM_001130991 HYOU1 1 0.16 1.24 48 6.6 87.1 27 5.29 No 54 1.26 Yes 0 0 No -26 0.95 Yes 44 97.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118923191 - NM_001130991 HYOU1 1 0.05 0.24 13 2 72.57 38 5.96 Yes NA NA NA 0 0 No -30 0.54 No 40 73.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 118925383 - NM_001130991 HYOU1 1 0.09 0.69 32 -1.53 0 14 6.78 Yes 58 0.6 No 0 0 No -29 0.48 No 41 58.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118925386 - NM_001130991 HYOU1 1 0.02 0.13 7 -2.15 71.12 11 6.56 Yes 55 0.6 No 0 0 No -26 0.52 No 44 57.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118925769 - NM_001130991 HYOU1 1 0.02 0.15 11 3.92 0 48 9.93 Yes 35 1.36 Yes 0 0 No -25 0.78 Yes 45 72.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 9618382 + NM_001320858 IAH1 1 0.95 1.08 43 5.49 85.18 25 5.59 Yes 66 0.47 No 24 0.69 Yes -24 0.84 Yes 46 87.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 9627603 + NM_001320858 IAH1 1 0.11 0.13 7 5.56 79.25 24 5.29 No 44 1.14 Yes 0 0 No -23 0.7 Yes 47 76.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 94985712 - NR_073446 IARS 1 1.36 6.56 72 6.57 87.13 35 5.9 Yes 73 0.92 Yes 0 0 No -28 0.89 Yes 42 85.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 94990269 - NR_073446 IARS 1 0.03 0.17 11 4.75 81.08 32 5.7 Yes 14 0.21 No 0 0 No -26 0.94 Yes 44 81.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 95002974 - NR_073446 IARS 1 1.52 4.65 71 2.15 65.62 36 6.4 Yes 23 0.86 Yes 35 0.56 Yes -42 0.74 Yes 28 87.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 95004970 - NR_073446 IARS 1 0.28 1.19 46 8.4 90.26 21 5.29 No 8 1.35 Yes 0 0 No -20 0.84 Yes 50 86.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95005261 - NR_073446 IARS 1 0.04 0.24 13 9.77 81.47 15 5.88 Yes 69 0.77 No 0 0 No -35 0.61 No 40 80.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 95007368 - NR_073446 IARS 1 0.03 0.19 12 -3.47 0 14 4.81 No -3 0.31 No 23 0.93 Yes -9 0.73 Yes 61 53.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 95012274 - NR_073446 IARS 1 0.43 1.63 51 7.62 87.99 20 5.1 No 7 0.42 No 0 0 No -24 0.51 No 46 57.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95013042 - NR_073446 IARS 1 0.4 2.28 61 10.06 94.99 22 4.21 No 5 1.76 Yes 0 0 No -21 0.62 No 49 88.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 95014097 - NR_073446 IARS 1 0.03 0.11 8 11.83 93.22 24 5.48 No 61 -3.37 No 0 0 No -23 0.94 Yes 47 94.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 95015729 - NR_073446 IARS 1 0.08 0.31 17 2.19 0 16 4 No 32 1.93 Yes 0 0 No -24 0.86 Yes 46 79.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95017887 - NR_073446 IARS 1 0.47 1.53 54 9.07 89.47 22 4.98 No 38 1.16 Yes 0 0 No -21 0.77 Yes 49 63.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 95020234 - NR_073446 IARS 1 0.03 0.18 11 -0.37 0 18 4.58 No 10 1.1 Yes 0 0 No -22 0.92 Yes 48 92.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95020269 - NR_073446 IARS 1 0.48 2.58 65 2.5 80.35 25 4.08 No 2 0.63 No 0 0 No -24 0.91 Yes 46 82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 95020285 - NR_073446 IARS 1 0.02 0.13 9 2.96 75.89 9 5 No 74 -4.6 No 0 0 No -25 0.53 No 45 46.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95025337 - NR_073446 IARS 1 0.03 0.13 7 -2.65 0 25 7.59 Yes 41 0.38 No 0 0 No -24 0.53 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95029630 - NR_073446 IARS 1 0.06 0.24 13 7.02 77.93 13 6.29 Yes 47 -2.49 No 0 0 No -21 0.23 No 49 29.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95029692 - NR_073446 IARS 1 0.07 0.31 19 7.51 74.02 36 6.08 Yes 73 -3.33 No 0 0 No -36 0.8 Yes 34 75.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 95030586 - NR_073446 IARS 1 0.02 0.13 8 -3.61 0 55 6.76 Yes 0 0.67 No 27 0.82 Yes -24 0.57 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 95032261 - NR_073446 IARS 1 0.09 0.42 24 2.04 0 37 6.32 Yes 24 0.74 No 0 0 No -36 0.68 Yes 34 72.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 95036825 - NR_073446 IARS 1 0.03 0.11 7 4.63 77.91 26 4.13 No 5 1.38 Yes 24 0.8 Yes -25 0.8 Yes 45 83.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 95048887 - NR_073446 IARS 1 0.09 0.43 21 -0.07 83.15 18 4.76 No 19 0.81 Yes 0 0 No -25 0.64 No 45 52.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 95048890 - NR_073446 IARS 1 0.13 0.6 33 -2.74 0 15 4.43 No 16 0.81 Yes 0 0 No -39 0.65 No 31 69.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 220275474 + NM_018060 IARS2 1 0.12 0.29 16 3.41 0 31 6.71 Yes 18 0.39 No 0 0 No -42 0.55 No 28 73.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 220279238 + NM_018060 IARS2 1 0.2 0.54 23 0.29 0 11 3.87 No 70 1.13 Yes 0 0 No -30 0.88 Yes 40 82.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 220285925 + NM_018060 IARS2 1 0.09 0.19 10 9.91 92.91 34 4.99 No 21 0.59 No 0 0 No -33 0.65 No 37 63.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 220287670 + NM_018060 IARS2 1 0.06 0.13 7 -1.09 65.19 23 4.9 No 64 0.72 No 0 0 No -22 0.83 Yes 26 66.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 220315260 + NM_018060 IARS2 1 0.2 0.54 23 0.1 69.36 44 6.93 Yes 31 0.86 Yes 0 0 No -43 0.62 No 27 92.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 82885719 - NM_001300906 IBTK 1 0.15 0.22 14 5.98 93.18 28 5.29 No 54 1.16 Yes 0 0 No -27 0.59 No 19 76.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 82885744 - NM_001300906 IBTK 1 12.86 18.35 72 2.9 84.41 27 8.24 Yes 29 1.16 Yes 0 0 No -26 0.62 No 44 67.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 82893120 - NM_001300906 IBTK 1 0.1 0.13 7 2.29 0 52 8.24 Yes 39 1.61 Yes 0 0 No -52 0.43 No 19 80.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 82899609 - NM_001300906 IBTK 1 0.08 0.13 8 5.55 78.06 24 5.48 No 55 0.98 Yes 0 0 No -23 0.66 Yes 47 75.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 82900897 - NM_001300906 IBTK 1 0.1 0.14 8 -1.33 70.39 24 4.64 No 42 0.89 Yes 0 0 No -23 0.95 Yes 47 97.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 82900900 - NM_001300906 IBTK 1 0.27 0.46 27 0.26 82.06 21 4.36 No 39 0.89 Yes 0 0 No -20 0.94 Yes 50 98.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 82900926 - NM_001300906 IBTK 1 0.35 0.63 30 -1.92 0 17 4.09 No 13 0.9 Yes 0 0 No -25 0.41 No 45 66.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 82904313 - NM_001300906 IBTK 1 1.17 1.53 53 9.91 80.96 26 6.98 Yes 63 1.7 Yes 25 0.88 Yes -25 0.92 Yes 45 92.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 82906164 - NM_001300906 IBTK 1 1376.17 108.04 72 11.71 83.91 40 9.02 Yes 27 0.88 Yes 24 0.75 Yes -24 0.54 No 46 54.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 82910419 - NM_001300906 IBTK 1 0.17 0.22 14 -2.48 0 17 4 No 13 0.49 No 0 0 No -32 0.68 Yes 45 69.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 82922506 - NM_001300906 IBTK 1 0.25 0.25 15 -1.74 0 27 7.12 Yes 68 0.88 Yes 0 0 No -34 0.42 No 37 54.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 82925907 - NM_001300906 IBTK 1 0.57 0.51 23 4.84 63.82 34 6.07 Yes 74 0.82 Yes 0 0 No -33 0.94 Yes 37 97.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 82930427 - NM_001300906 IBTK 1 0.29 0.25 15 4.9 0 33 5.92 Yes 63 1.72 Yes 0 0 No -32 0.93 Yes 38 94.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 82941551 - NM_001300906 IBTK 1 0.2 0.36 23 3.51 0 17 4.2 No 10 1.02 Yes 0 0 No -22 0.31 No 48 51.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 82955589 - NM_001300906 IBTK 1 0.46 0.56 29 8.63 80.35 22 5.8 Yes 9 2 Yes 0 0 No -21 0.92 Yes 49 87.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203692979 - NM_001288623 ICA1L 1 1.89 0.13 9 -3.66 83.44 35 6.13 Yes 22 0.13 No 0 0 No -34 0.71 Yes 36 78.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10383886 + NM_000201 ICAM1 1 0.11 0.26 15 6.79 80.55 31 6.07 Yes 18 0.25 No 0 0 No -30 0.75 Yes 40 84.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 62080284 - NM_001099789 ICAM2 1 0.21 0.29 16 1.09 69.56 28 5.83 Yes 15 1.08 Yes 0 0 No -27 0.9 Yes 43 89.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 62081542 - NM_001099789 ICAM2 1 0.05 0.1 7 7.79 82.63 17 6.56 Yes 4 1.3 Yes 0 0 No -26 0.74 Yes 44 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 62081576 - NM_001099789 ICAM2 1 0.06 0.13 7 7.7 90.13 13 5.15 No 54 0.35 No 24 0.5 Yes -24 0.41 No 46 54.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 62083854 - NM_001099789 ICAM2 1 0.42 0.75 38 7.17 84.42 24 5.48 No 19 0.49 No 23 0.87 Yes -23 0.93 Yes 47 94.34 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62084032 - NM_001099789 ICAM2 1 1.66 2.21 66 10.93 95.41 25 5.39 No NA NA NA 24 0.59 Yes -26 0.66 No 46 41.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 62084092 - NM_001099789 ICAM2 1 1.37 1.93 56 3.39 0 32 6.03 Yes 19 0.63 No 23 0.69 Yes -31 0.93 Yes 39 92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62085183 - NM_001099789 ICAM2 1 4.33 6 69 10.12 78.67 26 7.96 Yes 13 1.62 Yes 25 0.91 Yes -25 0.9 Yes 45 89.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 62085967 - NM_001099789 ICAM2 1 0.11 0.15 9 7.76 90.02 17 6.2 Yes 4 1.49 Yes 0 0 No -22 0.89 Yes 48 79.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10444645 - NM_001320605 ICAM3 1 0.03 0.15 9 8.34 84.5 33 8.06 Yes 39 -3.17 No 0 0 No -29 0.56 No 41 48.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10445050 - NM_001320605 ICAM3 1 0.02 0.1 7 2.15 74.07 21 4.8 No 8 0.07 No 0 0 No -20 0.94 Yes 50 91.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10445934 - NM_001320605 ICAM3 1 17.99 1.92 62 2.13 81.07 18 4.9 No 73 1.79 Yes 0 0 No -22 0.85 Yes 48 77.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10446030 - NM_001320605 ICAM3 1 1589.51 183.13 72 8.64 84.19 15 6.7 Yes 74 -3.85 No 23 0.77 Yes -20 0.76 Yes 50 91.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10449525 - NM_001320605 ICAM3 1 0.28 0.92 41 1.87 75.77 24 4.7 No -2 0.48 No 0 0 No -23 0.73 Yes 47 79.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10449540 - NM_001320605 ICAM3 1 0.28 0.85 40 5.91 80.31 9 5.57 Yes 76 -0.3 No 24 0.75 Yes -24 0.8 Yes 46 88.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10449810 - NM_001320605 ICAM3 1 0.09 0.28 17 5.08 71.94 27 6.39 Yes 75 2.25 Yes 0 0 No -26 0.72 Yes 44 83.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10449849 - NM_001320605 ICAM3 1 0.29 0.82 33 7.95 87.57 32 5.78 Yes 36 2.25 Yes 0 0 No -38 0.49 No 32 36.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10449885 - NM_001320605 ICAM3 1 0.11 0.36 21 3.01 69.51 34 6.44 Yes 0 2.16 Yes 20 0.75 Yes -20 0.48 No 37 59.75 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 10449922 - NM_001320605 ICAM3 1 1.26 3.88 68 9.49 89.63 85 7.4 Yes 51 1.7 Yes 36 0.27 Yes -36 0.35 No 34 51.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 5441285 + NM_015325 ICE1 1 1.12 0.64 31 8.18 91.41 21 5.98 Yes 64 0.91 Yes 0 0 No -20 0.86 Yes 50 90.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 5443282 + NM_015325 ICE1 1 0.17 0.13 8 -13.15 77.89 33 7.22 Yes 32 1.37 Yes 0 0 No -32 0.82 Yes 38 86.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 5447541 + NM_015325 ICE1 1 0.48 0.35 18 -11.2 66.05 51 5.01 No 29 0.73 No 0 0 No -42 0.35 No 20 41.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 5449733 + NM_015325 ICE1 1 0.6 0.35 20 3.21 0 15 4.58 No 10 0.46 No 0 0 No -22 0.92 Yes 48 96.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 5453228 + NM_015325 ICE1 1 3.05 1.89 55 12.26 88.77 23 5.74 Yes 10 1.47 Yes 0 0 No -22 0.82 Yes 48 81.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 5466209 + NM_015325 ICE1 1 0.48 0.42 24 6.7 80.9 25 5.57 Yes 35 0.14 No 0 0 No -24 0.67 Yes 46 74.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 5466483 + NM_015325 ICE1 1 0.77 0.78 34 6.88 87.9 16 5.81 Yes 3 0.92 Yes 0 0 No -32 0.65 No 41 61.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 5473724 + NM_015325 ICE1 1 0.24 0.26 12 4.92 84.5 21 5.2 No 8 1.11 Yes 0 0 No -20 0.77 Yes 50 88.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 5473740 + NM_015325 ICE1 1 0.28 0.32 16 3.05 67.25 26 5 No 24 1.08 Yes 0 0 No -25 0.89 Yes 45 71.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 5474782 + NM_015325 ICE1 1 0.69 0.65 27 6.93 89.65 13 4.41 No 5 0.49 No 0 0 No -21 0.64 No 49 79.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 5476604 + NM_015325 ICE1 1 0.68 0.51 26 5.19 83.44 23 3.56 No 60 0.57 No 0 0 No -25 0.78 Yes 45 91.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 60720720 - NM_024611 ICE2 1 0.15 0.18 11 4.27 68.42 21 5.2 No 73 -3.04 No 0 0 No -20 0.82 Yes 50 87.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 60720849 - NM_024611 ICE2 1 0.09 0.13 8 1.7 76.23 22 6.08 Yes -3 0.29 No 0 0 No -21 0.58 No 49 58.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 60720852 - NM_024611 ICE2 1 0.68 0.89 41 6.72 83.82 19 5.83 Yes 44 0.2 No 0 0 No -30 0.61 No 43 60.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 60723672 - NM_024611 ICE2 1 1.97 2.6 66 9.76 89.13 28 7.41 Yes 32 1.45 Yes 0 0 No -27 0.76 Yes 43 82.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 60723895 - NM_024611 ICE2 1 0.14 0.18 12 11.37 93.18 32 4.71 No 19 0.65 No 0 0 No -26 0.51 No 38 53.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 60728163 - NM_024611 ICE2 1 0.24 0.28 9 2.26 0 46 7.21 Yes 33 1.24 Yes 0 0 No -45 0.9 Yes 25 96.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 60732906 - NM_024611 ICE2 1 0.22 0.22 13 -2.77 0 23 6.28 Yes 29 0 No 23 0.68 Yes -33 0.33 No 37 49.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 60732910 - NM_024611 ICE2 1 2.14 2 62 6.14 86.89 19 6.01 Yes 6 0.66 No 23 0.68 Yes -29 0.44 No 41 48.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 60737991 - NM_024611 ICE2 1 2.02 1.72 54 10.45 92.55 60 8.25 Yes 47 2.4 Yes 0 0 No -25 0.59 No 45 60.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 60740265 - NM_024611 ICE2 1 0.15 0.17 8 0.22 75.4 24 5.1 No 72 -4.01 No 0 0 No -23 0.77 Yes 47 82.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 60740325 - NM_024611 ICE2 1 0.33 0.36 22 4.56 78.83 24 5.35 No 43 1.24 Yes 0 0 No -23 0.65 No 47 48.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 60753291 - NM_024611 ICE2 1 0.22 0.25 15 9.35 74.76 30 7.18 Yes 17 2.17 Yes 0 0 No -29 0.58 No 41 65.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 60760362 - NM_024611 ICE2 1 31.33 24.79 72 10.04 87.33 27 6.39 Yes 14 0.63 No 26 0.92 Yes -26 0.94 Yes 44 95.96 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 60769432 - NM_024611 ICE2 1 0.16 0.22 13 4.61 77.37 34 5.74 Yes 57 1.45 Yes 0 0 No -33 0.77 Yes 37 81.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 60770837 - NM_024611 ICE2 1 1.36 0.9 40 1.15 74.8 11 4.69 No 69 -5.11 No 21 0.68 Yes -41 0.44 No 53 40.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 60770850 - NM_024611 ICE2 1 1.13 0.81 31 1.69 0 16 4.36 No 56 -5.35 No 26 0.62 Yes -21 0.47 No 49 61.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 60770860 - NM_024611 ICE2 1 1.35 0.89 37 4.96 68.89 12 4.55 No 46 -4.72 No 26 0.62 Yes -18 0.61 No 52 65.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 6285029 - NM_012405 ICMT 1 0.1 0.19 11 2.54 77.78 19 8.66 Yes 6 0.79 Yes 0 0 No -31 0.55 No 39 79.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 6294572 - NM_012405 ICMT 1 13.1 15.47 72 7.68 80.31 32 7.28 Yes -1 1.21 Yes 31 0.91 Yes -31 0.96 Yes 39 96.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 6295031 - NM_012405 ICMT 1 3.64 2.43 62 0.26 0 32 5.62 Yes 15 1.19 Yes 0 0 No -31 0.77 Yes 39 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45654893 - NM_001283050 ICOSLG 1 0.48 0.53 25 7.53 81.09 35 5.91 Yes 22 0.54 No 0 0 No -34 0.8 Yes 36 80.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 45656949 - NM_001283050 ICOSLG 1 6.21 3 68 7.32 75.39 19 6.47 Yes 6 0.36 No 0 0 No -18 0.71 Yes 52 82.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 45658708 - NM_001283050 ICOSLG 1 10.99 4.63 67 9.65 84.91 61 8.06 Yes 48 1.57 Yes 0 0 No -23 0.71 Yes 10 45.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 23884900 - NM_002167 ID3 1 0.07 0.14 10 -0.76 0 10 4 No 29 2.16 Yes 0 0 No -41 0.92 Yes 29 93.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 23885507 - NM_002167 ID3 1 0.09 0.1 7 0.82 0 31 7.62 Yes 18 1.8 Yes 0 0 No -30 0.89 Yes 40 89.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 94224862 - NM_001322794 IDE 1 0.17 0.21 11 6.22 70.46 26 5.25 No 6 -2.07 No 0 0 No -28 0.78 Yes 42 82.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 94238547 - NM_001322794 IDE 1 0.82 0.93 41 5.74 83.1 32 5.83 Yes 55 0.94 Yes 26 0.55 Yes -31 0.68 Yes 39 72.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 94238547 - NM_001322794 IDE 1 5.57 6.21 70 5.74 83.1 32 5.83 Yes 55 0.94 Yes 26 0.55 Yes -31 0.68 Yes 39 72.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 94240674 - NM_001322794 IDE 1 1.26 2.29 61 6.4 88.8 38 6.91 Yes 29 0.99 Yes 25 0.71 Yes -32 0.57 No 38 80.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 94267490 - NM_001322794 IDE 1 0.17 0.18 10 7.21 78.61 13 5.86 Yes 0 1.54 Yes 0 0 No -37 0.42 No 53 44.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 94268576 - NM_001322794 IDE 1 0.22 0.47 25 7.13 81.04 25 6.78 Yes -4 1.07 Yes 0 0 No -24 0.9 Yes 46 86.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 94271888 - NM_001322794 IDE 1 0.21 0.24 15 4.86 76.2 25 6.15 Yes 9 -1.57 No 0 0 No -24 0.9 Yes 46 86.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 94318973 - NM_001322794 IDE 1 6.25 5.61 71 9.7 94.53 24 6.55 Yes 11 2.27 Yes 23 0.91 Yes -23 0.81 Yes 47 94.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 209108326 - NM_001282387 IDH1 1 0.33 0.47 25 1.88 75.93 46 6.02 Yes 10 1.61 Yes 0 0 No -45 0.57 No 16 58.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 90630775 - NM_001289910 IDH2 1 0.07 0.29 17 -2.34 0 18 4.35 No 13 -1.43 No 0 0 No -57 0.46 No 45 36.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 90630785 - NM_001289910 IDH2 1 0.05 0.25 15 4.96 79.32 16 4.54 No 3 -0.82 No 0 0 No -20 0.48 No 50 51.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 90631755 - NM_001289910 IDH2 1 0.02 0.13 8 -1.43 0 20 4.58 No 23 1.86 Yes 22 0.68 Yes -35 0.5 No 35 43.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 90632920 - NM_001289910 IDH2 1 0.06 0.33 14 9.76 82.56 26 5.66 Yes 13 1.43 Yes 0 0 No -25 0.9 Yes 45 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 78449914 + NM_005530 IDH3A 1 0.11 0.31 19 3.63 85.59 14 4.9 No 1 1.37 Yes 21 0.94 Yes -56 0.6 No 14 64.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 78449249 + NM_005530 IDH3A 1 2.56 6.75 72 9.27 93.39 27 6.25 Yes 55 0.87 Yes 26 0.67 Yes -26 0.69 Yes 44 74.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 78449685 + NM_005530 IDH3A 1 0.06 0.14 8 4.24 78.39 41 5.78 Yes 48 0.42 No 0 0 No -31 0.67 Yes 39 74.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 78449914 + NM_005530 IDH3A 1 0.14 0.46 21 3.63 85.59 14 4.9 No 1 1.37 Yes 21 0.94 Yes -56 0.6 No 14 64.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 78454027 + NM_005530 IDH3A 1 0.11 0.56 30 6.84 80.33 34 8.65 Yes 63 1.24 Yes 20 0.62 Yes -20 0.54 No 37 44.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 78454550 + NM_005530 IDH3A 1 0.03 0.14 9 7.62 82.86 56 6.47 Yes 1 0.73 No 27 0.68 Yes -29 0.54 No 48 66.15 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 78455811 + NM_005530 IDH3A 1 0.19 0.53 28 3.29 81.5 25 5.97 Yes 26 1.08 Yes 24 0.72 Yes -38 0.45 No 32 71.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 78455827 + NM_005530 IDH3A 1 0.15 0.43 24 3.78 91.39 19 5 No 42 1.08 Yes 26 0.92 Yes -54 0.66 Yes 16 68.74 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 78455884 + NM_005530 IDH3A 1 0.07 0.17 10 4.38 70.1 28 5.83 Yes 63 0.49 No 0 0 No -27 0.77 Yes 43 61.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 2640814 - NM_001258384 IDH3B 1 0.04 0.11 7 0.95 0 19 4.24 No 6 1.49 Yes 0 0 No -31 0.79 Yes 39 84.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 2641447 - NM_001258384 IDH3B 1 0.07 0.17 8 2.11 68.1 25 4.57 No 37 1.23 Yes 0 0 No -24 0.59 No 46 60.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153051402 - NM_004135 IDH3G 1 0.57 1.18 47 0.19 65.64 32 6 Yes 75 -2.49 No 0 0 No -31 0.34 No 39 39.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153051465 - NM_004135 IDH3G 1 0.47 0.96 46 -5.93 62.54 18 3.91 No 57 0.1 No 24 0.92 Yes -24 0.31 No 53 18.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153051500 - NM_004135 IDH3G 1 0.19 0.39 23 3.99 70.95 35 6.38 Yes 22 0.15 No 24 0.92 Yes -34 0.7 Yes 36 71.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153051532 - NM_004135 IDH3G 1 0.22 0.46 26 6.41 75.44 17 6.69 Yes 44 0.02 No 0 0 No -26 0.75 Yes 44 66.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153052426 - NM_004135 IDH3G 1 0.56 0.82 40 4.52 78.75 47 7 Yes 15 1.8 Yes 25 0.96 Yes -27 0.92 Yes 43 93.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 153053405 - NM_004135 IDH3G 1 0.05 0.14 9 -2.45 0 9 3.87 No 39 0.3 No 0 0 No -31 0.73 Yes 39 81.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153054656 - NM_004135 IDH3G 1 0.37 0.67 32 7.53 83.93 33 6.63 Yes 45 0.81 Yes 32 0.89 Yes -32 0.55 No 38 77.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 153055263 - NM_004135 IDH3G 1 0.09 0.1 7 1.31 69.12 20 5.1 No 7 -0.79 No 22 0.72 Yes -19 0.71 Yes 51 81.46 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 1088751 - NR_134300 IDI1 1 0.03 0.18 12 11.24 90.9 26 4.91 No 10 0.36 No 0 0 No -25 0.96 Yes 45 97.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 86244209 + NM_001256915 IDNK 1 1.3 0.33 21 11.49 94.72 16 5.39 No 3 1.18 Yes 0 0 No -29 0.75 Yes 41 73.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86258077 + NM_001256915 IDNK 1 0.54 0.17 9 8.62 90.4 24 5.1 No 46 0.83 Yes 0 0 No -23 0.91 Yes 47 87.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 148568748 - NM_006123 IDS 1 0.85 0.21 11 7.81 91.91 27 4.79 No 29 1.44 Yes 0 0 No -26 0.58 No 44 72.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 148573199 - NM_006123 IDS 1 11.69 27.1 72 9.41 93.47 22 5.1 No 9 1.49 Yes 21 0.93 Yes -21 0.9 Yes 49 95.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 148575728 - NM_006123 IDS 1 0.14 0.33 22 8.16 81.59 37 6.83 Yes 24 1.48 Yes 0 0 No -36 0.91 Yes 34 96.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 148577220 - NM_006123 IDS 1 0.19 0.43 28 3.9 77.74 28 5.93 Yes 15 1.82 Yes 0 0 No -27 0.66 No 43 76.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 148578039 - NM_006123 IDS 1 0.29 0.78 37 -2.54 0 13 4.16 No 28 0.33 No 0 0 No -40 0.77 Yes 30 84.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 148580886 - NM_006123 IDS 1 0.35 1.11 45 4.74 84.41 26 6.12 Yes 57 1.04 Yes 0 0 No -25 0.92 Yes 45 95.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 148582532 - NM_006123 IDS 1 0.24 0.54 29 6.18 75.76 26 6.77 Yes 47 0.71 No 0 0 No -25 0.89 Yes 45 87.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 148583650 - NM_006123 IDS 1 0.8 1.79 54 2.07 81.41 19 4.9 No 19 1.01 Yes 0 0 No -18 0.77 Yes 52 91.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 148583665 - NM_006123 IDS 1 0.35 0.79 41 1.47 82.64 17 5.29 No 4 1 Yes 0 0 No -21 0.95 Yes 49 93.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 148583708 - NM_006123 IDS 1 4.75 10.72 72 7.54 86.66 16 5.24 No 70 1.53 Yes 23 0.96 Yes -23 0.86 Yes 47 91.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 148583729 - NM_006123 IDS 1 0.08 0.21 9 4.5 85.45 20 5.1 No 49 1.52 Yes 23 0.96 Yes -19 0.77 Yes 51 83.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 148583754 - NM_006123 IDS 1 0.55 1.25 46 3 81.77 47 5.26 No 24 1.54 Yes 0 0 No -21 0.46 No 49 69.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 148584976 - NM_006123 IDS 1 4.7 11.44 72 8.89 89.23 27 5.74 Yes 56 1.47 Yes 0 0 No -26 0.3 No 44 67.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 44683929 - NM_016097 IER3IP1 1 0.06 0.13 9 2.76 76.14 17 3.89 No 42 1.2 Yes 0 0 No -25 0.5 No 45 42.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 44691491 - NM_016097 IER3IP1 1 0.04 0.11 8 12.93 94.56 29 7.31 Yes 16 1.01 Yes 0 0 No -28 0.81 Yes 42 76.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6649751 - NR_036467 IFFO1 1 5.29 1.46 50 -0.63 0 26 6.16 Yes 13 0.51 No 0 0 No -25 0.89 Yes 45 89.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6651020 - NR_036467 IFFO1 1 1.09 0.42 27 11.41 81.5 20 5.32 No 58 2.05 Yes 0 0 No -26 0.88 Yes 44 90.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6657324 - NR_036467 IFFO1 1 46.45 10.69 72 4.95 84.58 105 10.39 Yes 63 1.95 Yes 24 0.52 Yes -27 0.36 No 39 66.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 6658016 - NR_036467 IFFO1 1 2.22 0.11 7 8.31 76.57 127 10.94 Yes 71 1.64 Yes 26 0.64 Yes -24 0.87 Yes 46 93.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6658648 - NR_036467 IFFO1 1 31.64 1.49 49 -1.58 72.77 89 10.26 Yes 76 3.58 Yes 0 0 No -28 0.94 Yes 42 88.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6658651 - NR_036467 IFFO1 1 368.86 17.78 72 10.53 86.85 86 10.11 Yes 73 3.58 Yes 25 0.93 Yes -25 0.95 Yes 45 94.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 158980819 + NM_005531 IFI16 1 0.25 1.26 45 6.69 87.37 34 7.06 Yes 59 0.15 No 0 0 No -33 0.81 Yes 37 61.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 158985667 + NM_005531 IFI16 1 0.52 3.36 66 -3.23 0 14 3.87 No 12 -1.48 No 0 0 No -57 0.38 No 11 49.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 158986302 + NM_005531 IFI16 1 0.06 0.36 22 -0.13 61.16 46 8.52 Yes 33 0.48 No 24 0.91 Yes -45 0.39 No 25 35.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 158986407 + NM_005531 IFI16 1 0.02 0.11 7 10.45 90.87 19 5 No 6 1.11 Yes 18 0.81 Yes -18 0.82 Yes 52 88.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 158987982 + NM_005531 IFI16 1 0.02 0.15 10 5.07 77.74 28 5.29 No 73 1.88 Yes 42 0.31 Yes -27 0.74 Yes 49 50.12 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 158988198 + NM_005531 IFI16 1 0.02 0.13 8 5.73 81.84 9 4.9 No 36 0.81 Yes 0 0 No -25 0.9 Yes 45 87.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 158990109 + NM_005531 IFI16 1 0.02 0.13 9 -2.13 0 9 3.87 No 11 -2.47 No 29 0.78 Yes -34 0.68 Yes 36 56.53 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 159002296 + NM_005531 IFI16 1 0.05 0.31 17 1.22 63.89 44 6.85 Yes 46 0.19 No 22 0.69 Yes -21 0.87 Yes 49 82.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 159002319 + NM_005531 IFI16 1 0.34 2.13 56 -5.63 0 9 3.87 No 69 0.18 No 0 0 No -28 0.67 Yes 42 49.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 159013199 + NM_005531 IFI16 1 0.98 0.19 8 6.11 83.44 33 5.63 Yes 36 0.84 Yes 0 0 No -25 0.8 Yes 45 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 94580348 + NM_001288957 IFI27 1 0.24 0.24 9 7.42 87.23 20 7.62 Yes 7 1.15 Yes 0 0 No -19 0.47 No 51 57.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 94582195 + NM_001288957 IFI27 1 0.64 0.36 13 7.01 74.61 32 7.26 Yes 19 0.08 No 0 0 No -31 0.93 Yes 39 79.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 94563837 + NM_145249 IFI27L1 1 1.1 0.28 16 2 65.35 35 5.02 No 70 0.63 No 25 0.57 Yes -19 0.66 No 51 65.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 94563840 + NM_145249 IFI27L1 1 6.74 1.68 46 4.44 83.14 38 5.2 No 73 0.62 No 25 0.57 Yes -22 0.82 Yes 48 73.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 94568216 + NM_145249 IFI27L1 1 1.48 0.22 14 4.16 80.29 26 5.66 Yes 13 0.61 No 0 0 No -25 0.94 Yes 45 85.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 94568261 + NM_145249 IFI27L1 1 1.17 0.21 14 -0.72 71.91 19 4.79 No 58 0.62 No 0 0 No -23 0.72 Yes 47 52.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 94568213 + NM_145249 IFI27L1 1 3.63 0.71 32 2.1 73 23 5.38 No 10 0.63 No 0 0 No -22 0.94 Yes 48 90.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 94568216 + NM_145249 IFI27L1 1 4.26 0.76 40 4.16 80.29 26 5.66 Yes 13 0.61 No 0 0 No -25 0.94 Yes 45 85.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 94594956 - NM_032036 IFI27L2 1 1.01 1.86 54 5.01 78.7 26 5.66 Yes 64 1.21 Yes 0 0 No -25 0.87 Yes 45 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 94594956 - NM_032036 IFI27L2 1 0.08 0.13 8 5.01 78.7 26 5.66 Yes 64 1.21 Yes 0 0 No -25 0.87 Yes 45 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 94595030 - NM_032036 IFI27L2 1 0.13 0.25 18 2.27 76.57 20 5.1 No 7 1.21 Yes 23 0.83 Yes -19 0.68 Yes 51 73.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18285853 + NM_006332 IFI30 1 0.01 0.13 7 0.7 0 37 4.9 No 0 0.41 No 0 0 No -34 0.64 No 36 55.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18285882 + NM_006332 IFI30 1 0.02 0.33 21 -0.82 61.04 27 5.72 Yes 29 0.42 No 0 0 No -20 0.44 No 37 20.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18286363 + NM_006332 IFI30 1 0.01 0.14 8 -9.35 0 16 4.12 No 46 0.51 No 0 0 No -58 0.55 No 12 69.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 18287917 + NM_006332 IFI30 1 0 0.11 7 -12.86 0 13 3.82 No 72 0.01 No 0 0 No -13 0.55 No 58 41.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18287958 + NM_006332 IFI30 1 0.14 3.01 65 1.55 0 16 4.24 No 26 0.53 No 0 0 No -38 0.7 Yes 32 69.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 18287971 + NM_006332 IFI30 1 0.02 0.4 19 3.45 83.23 10 4.69 No 39 0.52 No 0 0 No -51 0.52 No 19 24.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18288482 + NM_006332 IFI30 1 0.03 0.46 13 -0.2 55.48 22 5.29 No 73 -4.43 No 0 0 No -25 0.4 No 45 47.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18288521 + NM_006332 IFI30 1 0.02 0.25 14 -13.49 0 24 6.93 Yes NA NA NA 0 0 No -23 0.61 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18288565 + NM_006332 IFI30 1 0.54 7.54 72 8.19 82.75 16 5.42 No 3 1.22 Yes 0 0 No -23 0.62 No 47 75.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 18288693 + NM_006332 IFI30 1 0.04 0.76 37 8.43 81.86 32 5.92 Yes 40 0.88 Yes 0 0 No -22 0.56 No 48 45.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18288617 + NM_006332 IFI30 1 0.01 0.21 13 -1.18 58.11 16 4.69 No 55 1.12 Yes 0 0 No -15 0.41 No 51 44.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18288664 + NM_006332 IFI30 1 0.03 0.43 22 -8.89 0 15 3.87 No 11 0.84 Yes 0 0 No -23 0.71 Yes 47 88.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18288693 + NM_006332 IFI30 1 0.06 0.93 41 8.43 81.86 32 5.92 Yes 40 0.88 Yes 0 0 No -22 0.56 No 48 45.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41162786 + NM_005533 IFI35 1 1.29 3.24 65 5.24 79.32 79 8.74 Yes 38 1.61 Yes 0 0 No -28 0.88 Yes 42 86.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41164946 + NM_005533 IFI35 1 1.05 3.46 68 4.26 80.71 19 6.08 Yes 6 0.86 Yes 18 0.76 Yes -22 0.67 Yes 48 89.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 41164958 + NM_005533 IFI35 1 0.41 1.35 48 5.72 0 19 4.58 No 10 1.09 Yes 18 0.76 Yes -22 0.7 Yes 48 69.28 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 41165076 + NM_005533 IFI35 1 0.19 0.57 31 7.13 79.28 22 4.68 No 76 -1.35 No 0 0 No -21 0.54 No 36 50.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41165294 + NM_005533 IFI35 1 0.05 0.1 7 -0.13 0 21 4.25 No 20 2.26 Yes 0 0 No -32 0.89 Yes 38 72.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41166129 + NM_005533 IFI35 1 2.12 4.85 71 4.05 0 37 6.55 Yes 24 0.85 Yes 0 0 No -26 0.57 No 44 79.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 79116225 + NM_006417 IFI44 1 5.39 8.06 68 6.46 77.16 21 7.41 Yes 8 0.88 Yes 30 0.69 Yes -28 0.54 No 50 50.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 79116229 + NM_006417 IFI44 1 0.34 0.56 23 1.02 0 25 7.65 Yes 12 0.86 Yes 0 0 No -24 0.43 No 46 63.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 79116312 + NM_006417 IFI44 1 0.35 0.51 24 9.39 92.51 24 7.35 Yes 11 0.1 No 0 0 No -23 0.86 Yes 47 89.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 79121051 + NM_006417 IFI44 1 0.08 0.22 14 2.59 0 38 6.79 Yes 17 0.27 No 0 0 No -30 0.55 No 34 45.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 79121400 + NM_006417 IFI44 1 0.06 0.19 11 7.77 89.12 30 5.82 Yes 17 0.99 Yes 0 0 No -29 0.65 No 40 50.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 79123641 + NM_006417 IFI44 1 0.37 1.18 49 7.62 86.8 36 6.32 Yes 44 1.07 Yes 0 0 No -35 0.8 Yes 35 78.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 79124555 + NM_006417 IFI44 1 0.06 0.18 9 4.71 82.04 34 5.71 Yes 61 1.24 Yes 0 0 No -33 0.57 No 37 65.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 79127070 + NM_006417 IFI44 1 0.2 0.21 12 2.45 78.48 14 5.6 Yes 63 1.21 Yes 0 0 No -27 0.68 Yes 43 89.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 79127076 + NM_006417 IFI44 1 0.16 0.19 12 -1.31 0 9 3.87 No 69 1.21 Yes 0 0 No -33 0.61 No 37 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 79127070 + NM_006417 IFI44 1 0.32 0.38 25 2.45 78.48 14 5.6 Yes 63 1.21 Yes 0 0 No -27 0.68 Yes 43 89.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 79127076 + NM_006417 IFI44 1 0.61 0.58 31 -1.31 0 9 3.87 No 69 1.21 Yes 0 0 No -33 0.61 No 37 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 79088470 + NM_006820 IFI44L 1 0.6 0.79 38 -1.79 70.24 16 4.32 No -4 0.6 No 0 0 No -21 0.81 Yes 49 79.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 79093910 + NM_006820 IFI44L 1 0.08 0.14 8 3.98 76.48 28 5.48 No 15 0.58 No 0 0 No -27 0.81 Yes 43 69.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 79095677 + NM_006820 IFI44L 1 0.31 1 39 10.57 88 24 7.2 Yes 11 0.99 Yes 23 0.9 Yes -23 0.67 Yes 47 79.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 79095677 + NM_006820 IFI44L 1 1.43 4.92 63 10.57 88 24 7.2 Yes 11 0.99 Yes 23 0.9 Yes -23 0.67 Yes 47 79.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 79097125 + NM_006820 IFI44L 1 0.77 2.74 52 6.47 89.04 23 5.05 No 73 0.84 Yes 26 0.64 Yes -20 0.55 No 44 47.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 79101026 + NM_006820 IFI44L 1 0.31 1.13 39 2.32 0 88 10.77 Yes 75 1.69 Yes 0 0 No -29 0.54 No 41 73.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 79101786 + NM_006820 IFI44L 1 0.09 0.51 21 10.14 86.69 20 6.01 Yes 7 1.02 Yes 0 0 No -25 0.49 No 45 74.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 79102779 + NM_006820 IFI44L 1 2.7 14.04 72 8.19 79.59 36 5.28 No 23 1.04 Yes 40 0.62 Yes -32 0.48 No 35 69.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 79102784 + NM_006820 IFI44L 1 0.43 2.31 54 0.28 0 41 5.59 Yes 28 1.02 Yes 40 0.62 Yes -37 0.39 No 30 72.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 79104835 + NM_006820 IFI44L 1 0.05 0.26 17 7.1 83.09 41 5.47 No 13 1.39 Yes 0 0 No -25 0.92 Yes 45 95.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 79106711 + NM_006820 IFI44L 1 0.04 0.17 11 -3.86 0 13 3.87 No 44 1.18 Yes 0 0 No -29 0.62 No 41 59.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 79107189 + NM_006820 IFI44L 1 0.55 1.42 45 3.08 76.08 55 7.16 Yes 75 -1.31 No 0 0 No -22 0.81 Yes 48 81.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 27993268 - NM_002038 IFI6 1 0.04 0.19 12 4.49 77.13 35 6.44 Yes 22 0.65 No 0 0 No -34 0.62 No 36 55.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 27995938 - NM_002038 IFI6 1 0.19 0.76 16 5.98 84.5 31 7.54 Yes 18 1.15 Yes 0 0 No -30 0.47 No 40 69.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 27996212 - NM_002038 IFI6 1 0.07 0.25 12 5.54 71.3 16 4.8 No 3 0.89 Yes 0 0 No -30 0.55 No 40 40.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 27997731 - NM_002038 IFI6 1 0.24 1.13 45 8.14 80.25 33 6.24 Yes 56 1.32 Yes 0 0 No -32 0.41 No 38 63.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 163131566 - NM_022168 IFIH1 1 0.04 0.1 7 0.43 71.79 22 5.11 No 34 0.98 Yes 0 0 No -25 0.5 No 45 55.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 163131584 - NM_022168 IFIH1 1 0.05 0.13 8 1.87 81.72 29 6.46 Yes 16 0.98 Yes 0 0 No -28 0.95 Yes 42 93.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 163133112 - NM_022168 IFIH1 1 0.29 0.79 33 11.33 94.44 81 8.44 Yes 68 -0.04 No 0 0 No -36 0.45 No 13 18.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 163137913 - NM_022168 IFIH1 1 0.07 0.24 16 6.14 84.65 16 5.1 No 3 1.04 Yes 0 0 No -24 0.64 No 48 42.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 163141154 - NM_022168 IFIH1 1 0.2 0.58 25 9.23 92.45 36 3.5 No 3 0.82 Yes 0 0 No -24 0.52 No 46 69.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 163163364 - NM_022168 IFIH1 1 0.06 0.15 11 -8.6 74.15 19 7.32 Yes 6 1.3 Yes 0 0 No -24 0.64 No 46 61.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 163165565 - NM_022168 IFIH1 1 0.29 0.63 31 0.22 70.96 40 8.45 Yes 27 1.28 Yes 0 0 No -39 0.47 No 28 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 163172858 - NM_022168 IFIH1 1 0.33 1.15 49 4.03 74.45 26 6.56 Yes 54 -4.42 No 0 0 No -25 0.88 Yes 45 87.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 163172922 - NM_022168 IFIH1 1 0.03 0.1 7 -4.69 78.26 27 6.56 Yes 14 1.16 Yes 0 0 No -27 0.82 Yes 43 75.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 314673 + NM_003641 IFITM1 1 0.25 3.13 66 8.43 84.8 18 3.94 No -3 1.1 Yes 0 0 No -24 0.38 No 46 42.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 314926 + NM_003641 IFITM1 1 0.58 6.92 72 6.78 0 25 7.35 Yes 12 1.92 Yes 0 0 No -24 0.94 Yes 46 95.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 308754 + NM_006435 IFITM2 1 0.21 0.17 8 8.02 87.8 18 4.12 No 5 0.54 No 24 0.75 Yes -24 0.39 No 46 41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 309017 + NM_006435 IFITM2 1 0.24 0.46 19 6.78 0 25 7.35 Yes 12 1.92 Yes 0 0 No -24 0.94 Yes 46 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34712469 + NM_000629 IFNAR1 1 0.09 0.14 9 5.14 72.09 52 6.95 Yes 58 1.04 Yes 0 0 No -24 0.79 Yes 46 87.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34713383 + NM_000629 IFNAR1 1 0.95 1.58 49 3.45 79.52 34 5.88 Yes 71 -5.34 No 0 0 No -30 0.39 No 40 64.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 34715578 + NM_000629 IFNAR1 1 0.93 2.18 63 1.1 0 27 6.08 Yes 14 1.01 Yes 0 0 No -26 0.73 Yes 44 78.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34720855 + NM_000629 IFNAR1 1 2.52 3.54 68 2.78 72.75 23 4.93 No 10 1.02 Yes 0 0 No -26 0.43 No 44 33.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 34721411 + NM_000629 IFNAR1 1 0.26 0.36 20 3.7 76.86 20 4.71 No 32 0.36 No 0 0 No -20 0.85 Yes 26 74.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 34725042 + NM_000629 IFNAR1 1 0.14 0.22 15 1.56 75.43 16 5.05 No 16 1.24 Yes 26 0.8 Yes -20 0.56 No 55 45.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 34725065 + NM_000629 IFNAR1 1 0.11 0.19 12 -4.05 81.15 22 5.2 No 39 1.24 Yes 0 0 No -28 0.78 Yes 45 59.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 34727636 + NM_000629 IFNAR1 1 1.18 2.5 62 5.49 82.83 22 4.83 No 33 0.78 Yes 0 0 No -45 0.41 No 21 36.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 34603340 + NM_001289125 IFNAR2 1 0.5 0.25 12 6.15 82.21 34 7.63 Yes 21 1.38 Yes 0 0 No -33 0.79 Yes 37 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34614190 + NM_001289125 IFNAR2 1 129.14 58.81 72 7.51 78.23 14 5.72 Yes 70 1.04 Yes 30 0.54 Yes -21 0.81 Yes 49 77.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34615987 + NM_001289125 IFNAR2 1 0.28 0.42 26 0.73 0 13 4.36 No 18 1.93 Yes 0 0 No -30 0.76 Yes 40 79.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34618396 + NM_001289125 IFNAR2 1 0.56 1.21 51 3.19 84.41 29 6.92 Yes 16 0.89 Yes 0 0 No -28 0.94 Yes 42 97.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34618558 + NM_001289125 IFNAR2 1 1.88 4.04 67 5.2 85.02 18 5.39 No 72 1.17 Yes 0 0 No -17 0.61 No 53 81.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 34618561 + NM_001289125 IFNAR2 1 0.49 1.07 43 3.25 80.12 21 5.66 Yes 75 1.16 Yes 0 0 No -20 0.81 Yes 50 87.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34624442 + NM_001289125 IFNAR2 1 0.5 1.43 52 3.95 74.57 68 8.58 Yes 55 0.89 Yes 0 0 No -32 0.31 No 30 48.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 34629946 + NM_001289125 IFNAR2 1 0.14 0.24 13 1.78 0 34 7 Yes 21 0.85 Yes 0 0 No -33 0.77 Yes 37 94.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34634865 + NM_001289125 IFNAR2 1 1.85 1.9 56 8.57 87.44 27 4.39 No 70 1.14 Yes 26 0.94 Yes -26 0.92 Yes 44 93.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34634865 + NM_001289125 IFNAR2 1 45.52 47.25 72 8.57 87.44 27 4.39 No 70 1.14 Yes 26 0.94 Yes -26 0.92 Yes 44 93.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34635116 + NM_001289125 IFNAR2 1 0.47 0.49 24 5.13 74.94 22 4.33 No 43 1.43 Yes 0 0 No -49 0.42 No 15 59.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 137527344 - NM_000416 IFNGR1 1 0.23 0.28 15 4.29 82.46 26 9.13 Yes 46 0.85 Yes 25 0.86 Yes -25 0.64 No 45 84.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 137536515 - NM_000416 IFNGR1 1 1.46 1.46 55 6.19 85.8 23 4.09 No 10 0.75 No 28 0.74 Yes -28 0.88 Yes 42 87.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34790944 + NM_001329128 IFNGR2 1 0.14 0.25 15 7.75 93.17 30 4.36 No 76 -1.54 No 0 0 No -29 0.72 Yes 41 40.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 34797408 + NM_001329128 IFNGR2 1 0.24 0.71 32 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -21 0.6 No 54 73.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 34797411 + NM_001329128 IFNGR2 1 0.21 0.61 27 2.78 80.12 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.6 No 51 84.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 34801167 + NM_001329128 IFNGR2 1 0.03 0.1 7 10.76 91.79 19 5.18 No 52 -0.49 No 0 0 No -30 0.47 No 40 57.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 34809144 + NM_001329128 IFNGR2 1 0.11 0.31 20 -1.12 0 14 4.36 No 28 0.63 No 0 0 No -40 0.83 Yes 30 91.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 24485670 - NM_170743 IFNLR1 1 0.63 0.17 11 2.93 75.08 26 7.12 Yes 13 1.27 Yes 0 0 No -25 0.95 Yes 45 94.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24506171 - NM_170743 IFNLR1 1 1.46 0.25 14 9.95 81.16 33 5.66 Yes 20 0.83 Yes 0 0 No -32 0.9 Yes 38 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24506618 - NM_170743 IFNLR1 1 4.27 0.43 21 5.71 89.28 22 7.28 Yes 9 1.18 Yes 0 0 No -21 0.86 Yes 49 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 112098971 + NM_001197079 IFRD1 1 0.16 0.15 10 8.6 90.3 23 5.39 No 48 -3.15 No 0 0 No -19 0.69 Yes 51 64.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 112105806 + NM_001197079 IFRD1 1 0.18 0.15 10 4.82 66.19 31 5.29 No 72 -5.86 No 0 0 No -28 0.85 Yes 42 88.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 112106580 + NM_001197079 IFRD1 1 0.19 0.15 9 9.7 82.53 32 5.5 No 57 -0.88 No 0 0 No -22 0.75 Yes 45 81.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 112110625 + NM_001197079 IFRD1 1 0.2 0.15 10 10.07 87.07 32 5.74 Yes 65 -2.14 No 0 0 No -27 0.76 Yes 43 68.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 112110953 + NM_001197079 IFRD1 1 0.81 0.63 30 6.69 77.44 35 5.94 Yes -1 0.78 Yes 0 0 No -31 0.54 No 47 67.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 50325737 - NM_006764 IFRD2 1 0.41 0.63 32 8.43 86.63 19 5 No NA NA NA 20 0.81 Yes -24 0.8 Yes 46 75.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 50326788 - NM_006764 IFRD2 1 1.3 2.25 60 5.8 0 23 5.39 No 10 0.92 Yes 18 0.8 Yes -22 0.86 Yes 48 87.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 50326808 - NM_006764 IFRD2 1 0.75 1.22 50 -5.06 0 20 4.54 No 62 0.24 No 18 0.8 Yes -32 0.34 No 55 28.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 50326937 - NM_006764 IFRD2 1 0.56 0.5 25 10.24 89.4 34 6.32 Yes 72 -3.43 No 0 0 No -26 0.79 Yes 44 88.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 129185732 + NM_052990 IFT122 1 4.37 0.46 27 5.15 86.53 29 6.46 Yes 10 0.12 No 28 0.66 Yes -28 0.42 No 42 67.59 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 129188642 + NM_052990 IFT122 1 1.36 0.19 10 6.23 80.74 40 6.61 Yes 27 1.85 Yes 0 0 No -39 0.5 No 36 77.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 129195268 + NM_052990 IFT122 1 1.33 0.22 13 2.76 82 20 4.18 No 71 0.48 No 0 0 No -20 0.58 No 50 54.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 129198608 + NM_052990 IFT122 1 3.74 0.38 22 7.52 81.14 23 6.58 Yes 74 0.68 No 25 0.64 Yes -22 0.91 Yes 48 91.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 129214351 + NM_052990 IFT122 1 2.41 0.32 18 7.82 96.17 25 5.1 No 20 1.65 Yes 0 0 No -21 0.48 No 51 56.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 129215419 + NM_052990 IFT122 1 1.83 0.28 18 6.35 81.08 48 7.16 Yes 61 1.23 Yes 0 0 No -32 0.71 Yes 30 32.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 129222366 + NM_052990 IFT122 1 4.03 0.36 21 9.59 88.29 23 5.83 Yes 50 1.51 Yes 0 0 No -22 0.95 Yes 48 94.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 129239004 + NM_052990 IFT122 1 1.44 0.11 7 5.35 80.87 16 4.69 No 17 -1.79 No 18 0.94 Yes -15 0.63 No 55 73.16 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 27668497 - NM_015662 IFT172 1 1.02 0.1 7 7.77 86.4 14 5.16 No 1 1.73 Yes 20 0.84 Yes -20 0.9 Yes 50 87.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27676967 - NM_015662 IFT172 1 1.59 0.1 7 1.93 69.65 14 4.46 No 1 0.21 No 25 0.87 Yes -19 0.62 No 51 54.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 27689712 - NM_015662 IFT172 1 3.7 0.19 10 6.55 84.94 24 5.92 Yes 65 1.74 Yes 0 0 No -23 0.66 Yes 47 60.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 27693897 - NM_015662 IFT172 1 18.18 1.53 59 6.98 79 28 6.18 Yes 15 1.12 Yes 0 0 No -21 0.69 Yes 49 83.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27703994 - NM_015662 IFT172 1 1.26 0.18 13 2.78 78.65 26 6.08 Yes 46 -2.94 No 25 0.82 Yes -25 0.82 Yes 45 78.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 26655684 - NM_001267774 IFT20 1 0.19 0.22 12 8.64 88.78 18 6.5 Yes 5 1.26 Yes 21 0.67 Yes -21 0.69 Yes 49 75.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 26655785 - NM_001267774 IFT20 1 0.36 0.35 22 10.77 95.63 19 5.45 No 70 1.16 Yes 27 0.85 Yes -18 0.42 No 52 57.54 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 26656095 - NM_001267774 IFT20 1 0.12 0.1 7 7.95 93.52 65 6.76 Yes 27 1.14 Yes 23 0.87 Yes -23 0.86 Yes 47 75.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 26656398 - NM_001267774 IFT20 1 0.15 0.19 11 8.33 80.52 43 5.63 Yes 44 0.9 Yes 0 0 No -21 0.63 No 28 54.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 26657255 - NM_001267774 IFT20 1 0.35 0.42 22 3.01 0 31 9.82 Yes 45 1.3 Yes 30 0.76 Yes -30 0.46 No 40 67.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 26659208 - NM_001267774 IFT20 1 25.03 1.68 54 8.63 86.49 81 7.87 Yes 40 2.22 Yes 22 0.96 Yes -22 0.81 Yes 48 89.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 37154450 - NM_001177701 IFT27 1 0.94 0.5 24 -1.36 0 19 5.08 No 37 0.99 Yes 0 0 No -26 0.65 No 44 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 37156964 - NM_001177701 IFT27 1 0.38 0.19 14 3.97 70.2 33 6.63 Yes 20 1.15 Yes 32 0.89 Yes -32 0.94 Yes 38 94.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 37164144 - NM_001177701 IFT27 1 0.74 0.39 21 6.12 72.92 24 5.47 No 11 0.54 No 23 0.59 Yes -24 0.68 Yes 46 84.97 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 37164224 - NM_001177701 IFT27 1 0.25 0.11 8 8.38 85.8 18 4.69 No 75 1.22 Yes 0 0 No -17 0.83 Yes 53 84.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37168766 - NM_001177701 IFT27 1 1.59 0.79 39 4.03 73.25 22 4.67 No 66 0.88 Yes 26 0.69 Yes -26 0.86 Yes 44 77.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 37168804 - NM_001177701 IFT27 1 0.29 0.15 9 1.92 73.17 41 5.69 Yes 53 1.09 Yes 26 0.69 Yes -40 0.63 No 30 66.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 76452468 + NM_052873 IFT43 1 0.8 0.31 16 8.37 81.25 21 5.2 No 72 -2.52 No 20 0.5 Yes -20 0.54 No 50 76.51 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 76549782 + NM_052873 IFT43 1 0.43 0.11 7 8.36 87.09 31 5.48 No 53 -1.6 No 24 0.97 Yes -26 0.55 No 44 48.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 118416226 - NM_020153 IFT46 1 0.28 0.11 8 5.14 75.52 31 5.26 No 22 1.05 Yes 19 0.46 Yes -34 0.88 Yes 36 96.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 118430548 - NM_020153 IFT46 1 0.24 0.11 7 5.26 75.78 35 6.4 Yes 22 0.59 No 0 0 No -34 0.73 Yes 36 76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 118431134 - NM_020153 IFT46 1 0.92 0.33 20 8.26 90.92 97 9.8 Yes NA NA NA 29 0.16 Yes -24 0.26 No 54 25.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 42246427 + NM_001323578 IFT52 1 1.51 0.71 38 2.91 84.79 21 5.02 No 8 1.18 Yes 0 0 No -20 0.67 Yes 50 74.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 42246880 + NM_001323578 IFT52 1 3.12 1.49 54 10.21 87.72 28 6.6 Yes 15 0.59 No 29 0.66 Yes -27 0.68 Yes 43 51.28 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 107884093 - NM_018010 IFT57 1 0.14 0.13 8 11.1 94.64 26 5.06 No 36 1.32 Yes 0 0 No -25 0.43 No 45 44.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 107885798 - NM_018010 IFT57 1 0.21 0.18 10 1.99 61.7 14 6.62 Yes 58 0.29 No 0 0 No -25 0.39 No 54 45.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 107907078 - NM_018010 IFT57 1 0.12 0.14 9 8.15 88.05 24 4.55 No 57 0.81 Yes 0 0 No -21 0.82 Yes 49 87.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 107925540 - NM_018010 IFT57 1 0.94 0.82 39 -6.27 0 30 7.48 Yes 17 0.48 No 0 0 No -32 0.47 No 38 63.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 107934236 - NM_018010 IFT57 1 0.82 0.6 32 1.5 0 27 6.16 Yes 14 1.18 Yes 0 0 No -26 0.85 Yes 44 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 26972357 + NM_001099223 IFT74 1 0.23 0.1 7 3.57 64.25 34 6.78 Yes 46 1.27 Yes 0 0 No -33 0.71 Yes 37 87.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 26982283 + NM_001099223 IFT74 1 0.29 0.11 8 3.71 83.95 32 5.41 No 12 0.7 No 27 0.9 Yes -27 0.81 Yes 43 86.97 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 26984257 + NM_001099223 IFT74 1 0.27 0.11 7 -1.46 73.73 28 6.61 Yes 15 2.03 Yes 0 0 No -27 0.71 Yes 43 91.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 26987068 + NM_001099223 IFT74 1 0.36 0.14 9 1.93 81.51 36 6.16 Yes 46 0.86 Yes 0 0 No -36 0.6 No 39 47.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 27019998 + NM_001099223 IFT74 1 0.8 0.22 13 9.22 93 31 5.33 No 18 0.69 No 0 0 No -30 0.56 No 40 66.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 27024180 + NM_001099223 IFT74 1 0.89 0.19 12 5.75 77.79 32 5.74 Yes 6 2.14 Yes 0 0 No -31 0.88 Yes 39 96.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 27036447 + NM_001099223 IFT74 1 12.47 5.51 71 10.27 91.3 42 6.46 Yes 29 0.52 No 23 0.51 Yes -41 0.41 No 29 41.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 27054467 + NM_001099223 IFT74 1 0.26 0.1 7 4.68 74.1 29 5.46 No 16 0.49 No 0 0 No -33 0.77 Yes 37 83.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 27054515 + NM_001099223 IFT74 1 0.31 0.11 8 4.6 83.39 38 5.64 Yes 7 0.85 Yes 0 0 No -41 0.52 No 29 54.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 27058911 + NM_001099223 IFT74 1 0.31 0.14 8 4.33 76.52 16 5.65 Yes 3 0.92 Yes 0 0 No -22 0.85 Yes 48 88.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 27061993 + NM_001099223 IFT74 1 0.9 0.42 24 6.72 76.13 38 6.19 Yes 40 1.01 Yes 0 0 No -38 0.76 Yes 32 91.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 159992366 - NM_001190242 IFT80 1 1.89 0.75 33 12.19 91.41 21 5.91 Yes 8 0.71 No 0 0 No -20 0.64 No 50 69.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 159992392 - NM_001190242 IFT80 1 0.48 0.18 13 9.93 89.22 30 6.96 Yes 36 0.62 No 37 0.62 Yes -26 0.75 Yes 44 91.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 160017063 - NM_001190242 IFT80 1 1.59 0.57 32 10.64 85.31 29 5.48 No 16 0.64 No 28 0.77 Yes -28 0.63 No 42 74.63 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 160017965 - NM_001190242 IFT80 1 0.24 0.1 7 2.6 74.52 38 5.95 Yes 56 -5.01 No 0 0 No -23 0.6 No 47 52.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 160049097 - NM_001190242 IFT80 1 0.76 0.26 18 9.01 95.96 26 5.56 No 13 0.67 No 0 0 No -25 0.87 Yes 45 80.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 160061604 - NM_001190242 IFT80 1 2.51 1 43 6.54 86.56 29 3.87 No 7 0.18 No 24 0.22 Yes -25 0.27 No 45 36.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 160065557 - NM_001190242 IFT80 1 0.45 0.18 10 2.03 71.46 28 6.32 Yes 15 1.06 Yes 0 0 No -27 0.94 Yes 43 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 160080336 - NM_001190242 IFT80 1 0.36 0.15 9 7.38 88.97 32 7.23 Yes 19 1.07 Yes 0 0 No -31 0.89 Yes 39 85.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 160091441 - NM_001190242 IFT80 1 0.27 0.13 8 6.75 91.55 16 5.1 No 3 1.52 Yes 0 0 No -19 0.52 No 51 68.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 160091458 - NM_001190242 IFT80 1 1.2 0.6 26 2.6 74.28 35 5.1 No 22 1.38 Yes 0 0 No -34 0.61 No 36 85.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 160091461 - NM_001190242 IFT80 1 4.12 2.14 61 7.27 77.93 32 4.96 No 19 1.39 Yes 31 0.85 Yes -31 0.65 No 39 84.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 160095679 - NM_001190242 IFT80 1 1.2 0.33 21 9.49 85.32 26 6.15 Yes 13 0.44 No 25 0.67 Yes -25 0.74 Yes 45 77.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110598966 + NM_001347947 IFT81 1 2.99 0.74 35 5.88 83.86 33 7.96 Yes 20 1.41 Yes 0 0 No -32 0.94 Yes 38 96.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110600748 + NM_001347947 IFT81 1 0.54 0.13 7 -1.04 63.5 32 5.68 Yes 19 0.64 No 0 0 No -31 0.89 Yes 39 86.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110605675 + NM_001347947 IFT81 1 9.74 1.71 56 11.48 93.81 35 5.56 Yes 63 0.79 Yes 30 0.61 Yes -34 0.82 Yes 40 85.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110638270 + NM_001347947 IFT81 1 0.4 0.14 10 5.8 78.97 28 4.01 No 74 0.46 No 0 0 No -28 0.41 No 42 43.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 21141808 + NM_001318491 IFT88 1 18.43 2.46 58 8.96 83.97 14 6.45 Yes 1 0.46 No 26 0.78 Yes -26 0.65 No 44 85.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr13 21142023 + NM_001318491 IFT88 1 4.63 0.65 37 3.57 84.41 32 6.16 Yes 19 0.75 No 31 0.73 Yes -31 0.88 Yes 39 85.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 21142032 + NM_001318491 IFT88 1 0.96 0.13 9 -4.04 0 12 4.24 No 28 0.73 No 0 0 No -40 0.88 Yes 30 88.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 21147159 + NM_001318491 IFT88 1 2.01 0.29 14 7.75 88.73 32 8.36 Yes -3 1.12 Yes 0 0 No -31 0.91 Yes 39 93.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21148508 + NM_001318491 IFT88 1 0.92 0.13 8 3.29 77.51 28 5.28 No 15 -1.59 No 20 0.64 Yes -27 0.85 Yes 43 87.08 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 21179629 + NM_001318491 IFT88 1 1.18 0.22 14 6.2 68.87 38 10.45 Yes 25 1.53 Yes 0 0 No -37 0.75 Yes 33 76.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21188495 + NM_001318491 IFT88 1 0.73 0.14 10 8.88 89.79 30 4.87 No 70 0.72 No 0 0 No -29 0.66 No 41 68.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 21210275 + NM_001318491 IFT88 1 1.55 0.31 18 6.91 90.73 28 4.86 No 43 1.13 Yes 0 0 No -27 0.86 Yes 43 87.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21237401 + NM_001318491 IFT88 1 1.31 0.22 14 10.67 86.41 14 5.48 No 28 0.85 Yes 29 0.45 Yes -29 0.57 No 41 76.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 69355644 + NM_001551 IGBP1 1 0.25 0.51 27 -3.01 0 14 3.13 No 54 -4.83 No 0 0 No -13 0.3 No 57 31.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 69366594 + NM_001551 IGBP1 1 0.09 0.15 9 9.22 90.51 39 4.72 No -4 0.19 No 0 0 No -23 0.77 Yes 47 69.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 69368418 + NM_001551 IGBP1 1 0.04 0.1 7 9.07 86.92 36 5.3 No 49 0.76 No 0 0 No -28 0.35 No 39 52.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 69370045 + NM_001551 IGBP1 1 0.3 0.56 25 7.51 85.7 38 8 Yes 60 -1.1 No 21 0.89 Yes -37 0.73 Yes 33 80.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 69382195 + NM_001551 IGBP1 1 2.44 5.47 72 4.88 75.78 26 5.39 No 57 -4.33 No 0 0 No -25 0.87 Yes 45 95.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 69385684 + NM_001551 IGBP1 1 0.12 0.25 16 -0.71 83.18 49 7.74 Yes 49 2.09 Yes 0 0 No -30 0.88 Yes 40 87.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 23358157 - NM_006547 IGF2BP3 1 0.49 0.21 13 6.03 76.63 31 5.95 Yes 2 0.94 Yes 0 0 No -30 0.84 Yes 40 86.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 23383466 - NM_006547 IGF2BP3 1 0.41 0.58 19 0.86 0 17 4 No 57 1.25 Yes 0 0 No -41 0.9 Yes 29 93.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 23442205 - NM_006547 IGF2BP3 1 0.79 0.18 10 10.54 89.12 20 7.75 Yes 7 1.55 Yes 24 0.81 Yes -24 0.9 Yes 46 85.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 23444730 - NM_006547 IGF2BP3 1 0.77 0.32 16 8.9 87.74 20 4.12 No 7 0.53 No 26 0.92 Yes -26 0.91 Yes 44 94.05 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 23455185 - NM_006547 IGF2BP3 1 0.63 0.21 14 1.55 68.15 23 4.48 No 2 0.55 No 22 0.95 Yes -22 0.74 Yes 48 47.6 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 23455839 - NM_006547 IGF2BP3 1 0.93 0.46 22 10.26 99.37 24 4.39 No 28 0.23 No 23 0.65 Yes -23 0.65 No 47 63.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 23456035 - NM_006547 IGF2BP3 1 2.26 0.81 35 5.18 77.44 20 5.89 Yes 74 -6.23 No 0 0 No -19 0.63 No 40 66.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 23508153 - NM_006547 IGF2BP3 1 0.22 0.15 8 -3.93 0 15 3.91 No 16 1.26 Yes 0 0 No -36 0.72 Yes 34 67.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 160433430 + NM_000876 IGF2R 1 0.09 0.14 10 -2.96 0 13 4 No 61 -4.34 No 0 0 No -12 0.42 No 58 48.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 160433843 + NM_000876 IGF2R 1 0.16 0.25 18 8.3 87.01 70 9.36 Yes 57 0.72 No 0 0 No -57 0.28 No 21 40.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 160455452 + NM_000876 IGF2R 1 0.07 0.13 7 -15.09 0 59 8 Yes 46 0.27 No 0 0 No -38 0.35 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 160457142 + NM_000876 IGF2R 1 0.19 0.36 18 6.1 86.29 22 5.29 No 71 -6.44 No 0 0 No -22 0.76 Yes 48 73.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 160461624 + NM_000876 IGF2R 1 0.1 0.19 11 4.07 90.96 28 5.2 No 18 0.22 No 0 0 No -27 0.63 No 43 63.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 160467923 + NM_000876 IGF2R 1 0.18 0.29 17 6.86 87.46 27 6.69 Yes 14 0.74 No 0 0 No -26 0.93 Yes 44 92.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 160478779 + NM_000876 IGF2R 1 0.5 0.78 20 9.59 81.62 35 5.82 Yes 22 0.68 No 0 0 No -30 0.67 Yes 40 61.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 160481632 + NM_000876 IGF2R 1 0.15 0.44 20 3.81 84.47 46 7.93 Yes 33 2.31 Yes 0 0 No -45 0.69 Yes 25 73.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 160485839 + NM_000876 IGF2R 1 0.12 0.18 9 0 0 52 7.02 Yes 24 1.26 Yes 0 0 No -36 0.84 Yes 34 84.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 160489876 + NM_000876 IGF2R 1 0.2 0.29 15 6.08 89.29 12 5.2 No 69 -2.85 No 0 0 No -20 0.54 No 50 72.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 160490152 + NM_000876 IGF2R 1 0.11 0.18 12 7.25 91.76 33 6.08 Yes 54 0.42 No 0 0 No -32 0.76 Yes 38 79.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 160494929 + NM_000876 IGF2R 1 0.09 0.14 10 0.85 76.14 24 6.27 Yes 11 0.48 No 0 0 No -23 0.38 No 47 56.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 160504988 + NM_000876 IGF2R 1 0.05 0.1 7 -3.58 0 10 4 No 25 1.8 Yes 0 0 No -37 0.67 Yes 25 73.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36230671 - NR_144340 IGFLR1 1 47.03 7.85 72 9.42 90.92 40 6.18 Yes NA NA NA 24 0.45 Yes -33 0.67 Yes 37 87.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36230988 - NR_144340 IGFLR1 1 2.29 0.4 22 -2.75 79.29 24 5.83 Yes 11 0.15 No 0 0 No -23 0.83 Yes 47 78.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36231398 - NR_144340 IGFLR1 1 0.98 0.14 8 2.37 67.12 36 6.15 Yes 6 1.64 Yes 0 0 No -18 0.64 No 35 25.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36231466 - NR_144340 IGFLR1 1 61 11.06 72 1.38 0 16 4.58 No NA NA NA 19 0.71 Yes -19 0.77 Yes 51 80.88 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36232122 - NR_144340 IGFLR1 1 0.29 0.15 9 -5.94 0 18 4.12 No 32 0.48 No 0 0 No -44 0.96 Yes 26 86.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36232130 - NR_144340 IGFLR1 1 75.67 33.14 72 2.91 68.77 37 7.95 Yes 24 0.51 No 0 0 No -36 0.96 Yes 34 92.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36232529 - NR_144340 IGFLR1 1 0.32 0.14 10 5.3 93.56 28 5.74 Yes 2 0.02 No 32 0.68 Yes -28 0.6 No 42 46.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68693760 + NM_002180 IGHMBP2 1 0.72 0.25 13 12.22 88.27 45 4.67 No 73 -0.83 No 0 0 No -33 0.17 No 37 58.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 68697201 + NM_002180 IGHMBP2 1 2.49 0.46 20 1.21 71.58 32 7.42 Yes 19 0.52 No 0 0 No -31 0.93 Yes 39 96.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 68697790 + NM_002180 IGHMBP2 1 1.29 0.25 17 3.48 68.39 33 7.61 Yes 47 0.58 No 32 0.52 Yes -32 0.48 No 42 59.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68702798 + NM_002180 IGHMBP2 1 1.99 0.51 27 -1.62 0 21 4.58 No 49 -4.21 No 0 0 No -20 0.93 Yes 50 84.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 68706125 + NM_002180 IGHMBP2 1 1.69 0.4 23 5.85 80.53 21 6 Yes 8 1.06 Yes 0 0 No -20 0.86 Yes 50 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 23237662 + NM_001178126 IGLL5 1 0.01 3.29 8 -7.45 71.83 23 3.92 No 3 1.27 Yes 0 0 No -22 0.92 Yes 48 87.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160063118 - NM_001320247 IGSF8 1 0.51 0.14 10 0.7 0 32 9 Yes 19 1.5 Yes 0 0 No -31 0.72 Yes 39 84.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 140028467 + NM_006083 IK 1 0.09 0.39 18 5.8 90.92 22 5.24 No 9 1 Yes 21 0.88 Yes -21 0.69 Yes 49 62.3 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 140031651 + NM_006083 IK 1 0.08 0.35 14 3.52 85.71 50 7.15 Yes 46 -2.02 No 26 0.06 Yes -49 0.74 Yes 21 49.27 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 140039708 + NM_006083 IK 1 0.06 0.15 10 -21.94 0 21 4.79 No 9 -2.41 No 21 0.46 Yes -20 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 111632834 - NM_001330749 IKBKAP 1 0.13 0.21 11 -2.64 0 77 7.55 Yes 58 1.86 Yes 0 0 No -40 0.77 Yes 30 82.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 111635082 - NM_001330749 IKBKAP 1 0.57 0.72 33 11.46 95.65 44 6.86 Yes 31 2.05 Yes 0 0 No -44 0.66 No 27 70.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 111637244 - NM_001330749 IKBKAP 1 0.11 0.14 7 4.41 0 10 4 No 17 1.43 Yes 0 0 No -29 0.83 Yes 41 94.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 111638016 - NM_001330749 IKBKAP 1 0.26 0.28 16 6.74 78.16 21 5.64 Yes 75 0.71 No 20 0.71 Yes -20 0.84 Yes 50 94.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 111647193 - NM_001330749 IKBKAP 1 0.22 0.17 10 7.54 87.11 21 7.21 Yes 8 1.25 Yes 0 0 No -20 0.89 Yes 50 94.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 111659645 - NM_001330749 IKBKAP 1 0.3 0.32 18 5.22 82.76 22 5.65 Yes 31 0.59 No 0 0 No -28 0.55 No 42 52.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 111673457 - NM_001330749 IKBKAP 1 0.09 0.11 8 1.34 0 31 6.63 Yes 18 1.81 Yes 0 0 No -30 0.92 Yes 40 94.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 111688876 - NM_001330749 IKBKAP 1 0.19 0.19 11 -0.63 0 11 4.12 No 76 -1.95 No 0 0 No -45 0.36 No 39 60.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 111693337 - NM_001330749 IKBKAP 1 20.29 7.43 72 6.28 73.04 27 5.74 Yes 14 0.91 Yes 0 0 No -26 0.94 Yes 44 92.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 111693480 - NM_001330749 IKBKAP 1 3.9 1.46 57 1.99 83.77 24 3.89 No 74 1.76 Yes 0 0 No -23 0.48 No 43 54.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 42131573 + NR_033818 IKBKB 1 0.41 0.24 14 0.78 0 34 8.27 Yes 21 -0.24 No 0 0 No -25 0.34 No 41 47.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 42146158 + NR_033818 IKBKB 1 0.66 0.36 22 -0.54 0 14 4 No NA NA NA 0 0 No -45 0.69 Yes 45 82.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 42146774 + NR_033818 IKBKB 1 0.34 0.17 11 6.74 84.89 21 5.61 Yes 8 0.03 No 0 0 No -21 0.81 Yes 49 70 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 42163885 + NR_033818 IKBKB 1 3.5 3.03 66 4.39 71.88 23 5.82 Yes 44 1.7 Yes 22 0.77 Yes -22 0.6 No 48 54.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 42175227 + NR_033818 IKBKB 1 2.32 2.15 62 4.65 80.69 41 7.13 Yes 64 0.43 No 25 0.6 Yes -31 0.81 Yes 39 86.31 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 42176731 + NR_033818 IKBKB 1 0.17 0.15 10 6.89 92.73 30 5.37 No 17 0.35 No 0 0 No -29 0.83 Yes 41 84.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 42177108 + NR_033818 IKBKB 1 0.19 0.15 8 -0.3 0 9 3.87 No 7 0.64 No 0 0 No -47 0.79 Yes 23 76.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 42178240 + NR_033818 IKBKB 1 0.22 0.19 7 -4.77 0 18 4.51 No 5 -1.99 No 24 0.88 Yes -20 0.42 No 58 25.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 42177990 + NR_033818 IKBKB 1 0.31 0.28 17 7.9 81.41 28 5.08 No 64 0.95 Yes 28 0.76 Yes -28 0.63 No 42 69.08 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 42178192 + NR_033818 IKBKB 1 0.13 0.13 8 11.29 82.79 40 6.78 Yes 49 -1.62 No 19 0.88 Yes -39 0.7 Yes 31 78.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 42178240 + NR_033818 IKBKB 1 1.37 1.15 50 -4.77 0 18 4.51 No 5 -1.99 No 24 0.88 Yes -20 0.42 No 58 25.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 42179544 + NR_033818 IKBKB 1 0.17 0.19 12 0.32 79.48 40 5.76 Yes 32 0.31 No 29 0.69 Yes -22 0.58 No 31 72.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 42182804 + NR_033818 IKBKB 1 0.19 0.22 15 8 90.27 24 5.48 No 56 -1.44 No 30 0.7 Yes -23 0.86 Yes 47 80.35 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 42183489 + NR_033818 IKBKB 1 0.5 0.53 28 -3 77.55 27 5.62 Yes 14 1.35 Yes 0 0 No -26 0.66 No 44 57.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 42187733 + NR_033818 IKBKB 1 0.42 0.32 19 7.47 83.81 25 6.4 Yes 12 1.98 Yes 0 0 No -24 0.86 Yes 46 94.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 206644503 + NM_001193321 IKBKE 1 0.74 0.56 29 -0.17 0 31 5.19 No 18 1.37 Yes 0 0 No -30 0.93 Yes 40 91.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 206649408 + NM_001193321 IKBKE 1 2.21 0.79 30 3.52 74.58 49 7.41 Yes 36 1.06 Yes 0 0 No -48 0.6 No 32 69.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 206649445 + NM_001193321 IKBKE 1 2.96 0.93 40 -4.69 0 40 5.76 Yes 73 1.03 Yes 0 0 No -29 0.58 No 41 54.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 206649491 + NM_001193321 IKBKE 1 0.47 0.18 9 3.59 78.98 25 4.9 No 18 -2.01 No 28 0.66 Yes -24 0.78 Yes 46 39.76 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 206652290 + NM_001193321 IKBKE 1 1.03 0.36 20 0.99 0 46 8.54 Yes 33 2.1 Yes 0 0 No -45 0.85 Yes 25 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 206657318 + NM_001193321 IKBKE 1 5.36 0.97 38 8.89 88.77 28 4.89 No 64 0.82 Yes 0 0 No -27 0.65 No 43 56.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 206657322 + NM_001193321 IKBKE 1 3 0.63 27 4.15 0 32 5.12 No 68 0.81 Yes 0 0 No -31 0.6 No 39 51.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 206668118 + NM_001193321 IKBKE 1 1.2 0.44 23 3.75 85.02 17 5.28 No 4 0.45 No 0 0 No -25 0.59 No 45 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 153784350 + NM_003639 IKBKG 1 0.47 0.4 24 -4.21 66.22 21 4.8 No 34 -2.49 No 31 0.43 Yes -46 0.42 No 18 30.96 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153786749 + NM_003639 IKBKG 1 0.93 0.57 30 3.85 82.21 30 5.48 No 17 1.25 Yes 26 0.94 Yes -29 0.87 Yes 41 92.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 50363121 + NM_001291847 IKZF1 1 0.07 0.13 8 4.92 80.31 22 5.73 Yes 24 0.81 Yes 0 0 No -21 0.64 No 49 71.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 50364399 + NM_001291847 IKZF1 1 0.27 0.43 24 5.65 67.99 28 5.1 No 15 0.44 No 0 0 No -23 0.48 No 47 59.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 213877502 - NM_016260 IKZF2 1 0.25 0.86 40 8.61 92.74 35 5.86 Yes 22 0.16 No 0 0 No -30 0.74 Yes 40 80.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 213878686 - NM_016260 IKZF2 1 0.04 0.17 11 -4.47 0 14 4.36 No 67 0.4 No 32 0.44 Yes -37 0.73 Yes 33 49.54 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 213881769 - NM_016260 IKZF2 1 0.35 1.29 41 7.2 0 22 4.55 No 3 0.56 No 0 0 No -21 0.77 Yes 49 73.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 213881781 - NM_016260 IKZF2 1 0.04 0.14 9 -3.33 0 19 4.42 No -3 0.05 No 0 0 No -18 0.62 No 61 35.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 213885910 - NM_016260 IKZF2 1 0.04 0.11 8 5.64 86.54 15 4.56 No 2 1.35 Yes 0 0 No -58 0.28 No 13 39.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 213885934 - NM_016260 IKZF2 1 0.39 1.28 49 2.95 83.28 30 5.59 Yes 21 0.51 No 0 0 No -42 0.6 No 28 61.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 213886445 - NM_016260 IKZF2 1 0.28 0.85 33 10.02 87.14 28 6.69 Yes 53 0.64 No 27 0.87 Yes -27 0.66 Yes 39 81.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 213886867 - NM_016260 IKZF2 1 0.93 1.1 46 -13.69 61.82 20 4.9 No -4 1.58 Yes 20 0.92 Yes -19 0.84 Yes 51 70.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 213910268 - NM_016260 IKZF2 1 0.37 0.49 26 3.84 75.1 24 4.5 No 51 0.21 No 0 0 No -23 0.51 No 41 51.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 213914261 - NM_016260 IKZF2 1 0.3 0.38 17 10.01 85.56 9 5.74 Yes 64 0.77 Yes 0 0 No -26 0.59 No 44 58.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 213921469 - NM_016260 IKZF2 1 1.57 1.31 49 9.77 95.81 29 8.96 Yes 16 1.75 Yes 28 0.93 Yes -28 0.52 No 42 77.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 213945963 - NM_016260 IKZF2 1 0.6 0.97 34 4.29 81.69 55 7.43 Yes 3 1.23 Yes 19 0.02 Yes -54 0.9 Yes 16 97.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 213962685 - NM_016260 IKZF2 1 1.28 1.9 58 6.47 85.97 25 5.1 No 76 2.27 Yes 24 0.61 Yes -24 0.61 No 45 49.78 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 213963634 - NM_016260 IKZF2 1 0.18 0.22 15 6.26 80.89 29 6.32 Yes 16 2.17 Yes 0 0 No -28 0.81 Yes 42 82.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 213994937 - NM_016260 IKZF2 1 0.23 0.33 21 8.86 87.72 23 4.97 No 76 1.1 Yes 0 0 No -22 0.84 Yes 48 92.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 213998421 - NM_016260 IKZF2 1 0.16 0.25 7 2.46 83 48 6.08 Yes 35 0.76 No 0 0 No -27 0.52 No 39 53.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 214009895 - NM_016260 IKZF2 1 0.66 0.99 35 8.04 85.86 21 3.81 No 8 0.54 No 0 0 No -24 0.35 No 45 40.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 214012540 - NM_016260 IKZF2 1 3.1 6.17 70 -1.31 69.89 22 5 No 45 -3.74 No 25 0.62 Yes -26 0.39 No 49 45.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 37914219 - NM_001284514 IKZF3 1 0.03 0.15 9 7.41 85.95 31 5.91 Yes 18 1.5 Yes 0 0 No -30 0.94 Yes 40 98.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37926357 - NM_001284514 IKZF3 1 0.13 0.54 23 8.02 86.71 18 4.8 No 41 0.5 No 0 0 No -23 0.46 No 49 48.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 37934017 - NM_001284514 IKZF3 1 1.9 3.01 62 -4.75 0 47 7.95 Yes 58 -0.74 No 0 0 No -47 0.72 Yes 24 71.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37934017 - NM_001284514 IKZF3 1 0.9 1.36 50 -4.75 0 47 7.95 Yes 58 -0.74 No 0 0 No -47 0.72 Yes 24 71.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37966863 - NM_001284514 IKZF3 1 0.13 0.33 19 11.77 95.08 41 7.13 Yes 28 0.79 Yes 0 0 No -30 0.73 Yes 40 48.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 37975774 - NM_001284514 IKZF3 1 0.13 0.32 19 4.64 86.67 16 4.69 No 12 0.04 No 0 0 No -24 0.75 Yes 46 80.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37985084 - NM_001284514 IKZF3 1 0.11 0.31 18 7.59 86.46 23 7.35 Yes 10 1.27 Yes 0 0 No -22 0.94 Yes 48 94.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37985738 - NM_001284514 IKZF3 1 0.08 0.21 12 -1.26 0 25 6.57 Yes 25 0.33 No 0 0 No -25 0.91 Yes 45 90.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37985741 - NM_001284514 IKZF3 1 0.05 0.15 11 -11.18 0 22 6.47 Yes 22 0.33 No 0 0 No -22 0.9 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 37988403 - NM_001284514 IKZF3 1 0.07 0.13 8 -10.59 0 28 5.96 Yes 6 1.46 Yes 0 0 No -27 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 37996351 - NM_001284514 IKZF3 1 0.13 0.21 14 1.32 59.67 28 5.39 No 19 2.08 Yes 0 0 No -27 0.87 Yes 39 72.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37997425 - NM_001284514 IKZF3 1 0.1 0.17 9 10.74 95.65 58 8.39 Yes 45 1.81 Yes 0 0 No -27 0.49 No 49 56.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 124756211 - NM_001271840 IKZF5 1 0.34 0.14 10 -1.66 0 9 3.87 No 72 1.74 Yes 0 0 No -29 0.48 No 41 60.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 124756217 - NM_001271840 IKZF5 1 0.84 0.38 20 1.57 83.14 24 5.81 Yes 66 1.74 Yes 0 0 No -23 0.49 No 47 56.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 124758175 - NM_001271840 IKZF5 1 8.39 3.94 69 9.74 91.54 16 4.69 No 13 0.51 No 21 0.76 Yes -25 0.29 No 47 39.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 124765864 - NM_001271840 IKZF5 1 6.77 3.01 56 4.65 72.05 44 9.22 Yes 31 0.66 No 0 0 No -43 0.8 Yes 27 87.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 117857398 + NM_001558 IL10RA 1 11.6 3.88 65 1.8 74.22 24 7.21 Yes 11 -0.53 No 23 0.89 Yes -23 0.88 Yes 47 84.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 117859102 + NM_001558 IL10RA 1 0.39 0.11 8 -1.2 0 9 3.87 No 10 1.96 Yes 0 0 No -22 0.77 Yes 48 88.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 117862972 + NM_001558 IL10RA 1 0.21 0.13 7 4.45 0 22 4.58 No 56 0.87 Yes 0 0 No -21 0.78 Yes 51 69.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 34645930 + NM_000628 IL10RB 1 0.1 0.14 8 8.77 87.69 20 6.63 Yes 7 1.93 Yes 0 0 No -27 0.73 Yes 43 77.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34648906 + NM_000628 IL10RB 1 0.2 0.28 16 1.46 0 16 3.87 No 16 1.71 Yes 26 0.81 Yes -28 0.66 No 42 72.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 34651124 + NM_000628 IL10RB 1 0.08 0.15 10 8.73 86.1 26 5.38 No 46 1.44 Yes 0 0 No -26 0.84 Yes 44 84.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34652122 + NM_000628 IL10RB 1 0.37 0.65 32 5.07 73.75 25 6.47 Yes 12 1.5 Yes 0 0 No -24 0.77 Yes 46 85.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34661654 + NM_000628 IL10RB 1 0.1 0.19 11 -3.45 0 18 3.61 No 14 0.67 No 0 0 No -31 0.89 Yes 39 76.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 34666316 + NM_000628 IL10RB 1 0.06 0.13 8 5.39 76.77 34 7.3 Yes 21 1.46 Yes 33 0.82 Yes -33 0.94 Yes 37 95.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 34668582 + NM_000628 IL10RB 1 0.18 0.31 16 -0.54 0 14 4.47 No 60 1.27 Yes 0 0 No -21 0.8 Yes 49 85.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 159712031 + NM_000882 IL12A 1 1.25 0.24 14 5.87 77.64 23 5.45 No 2 1.49 Yes 0 0 No -26 0.39 No 44 64.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18170567 - NM_001290024 IL12RB1 1 13.07 2.21 56 9.13 91.27 35 5.99 Yes 38 -2.71 No 0 0 No -18 0.43 No 52 54.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18172670 - NM_001290024 IL12RB1 1 0.33 0.15 10 4.8 83.57 37 6.92 Yes 53 -2.74 No 0 0 No -32 0.72 Yes 38 78.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 18173085 - NM_001290024 IL12RB1 1 0.43 0.18 12 -0.76 67.02 25 6.26 Yes 41 -0.49 No 0 0 No -25 0.6 No 46 68.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18173246 - NM_001290024 IL12RB1 1 2.06 0.72 30 6.56 90.27 13 4 No 25 0.31 No 0 0 No -25 0.92 Yes 45 95.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 18173264 - NM_001290024 IL12RB1 1 0.7 0.21 13 4.6 85.53 31 4.78 No 7 0.31 No 0 0 No -28 0.53 No 42 46.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18174522 - NM_001290024 IL12RB1 1 0.54 0.14 8 9.48 84.11 29 6.32 Yes 68 1.81 Yes 0 0 No -28 0.85 Yes 42 78.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18174893 - NM_001290024 IL12RB1 1 0.66 0.36 20 8.21 81.31 21 6.45 Yes 8 0.32 No 0 0 No -23 0.58 No 47 52.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18182144 - NM_001290024 IL12RB1 1 72.57 31.78 72 10.18 91.81 24 6.04 Yes 34 1.49 Yes 23 0.88 Yes -23 0.77 Yes 47 68.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 18182144 - NM_001290024 IL12RB1 1 0.26 0.13 7 10.18 91.81 24 6.04 Yes 34 1.49 Yes 23 0.88 Yes -23 0.77 Yes 47 68.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 18184396 - NM_001290024 IL12RB1 1 1.05 0.63 29 0.24 69.55 22 4.8 No 51 0.28 No 0 0 No -21 0.93 Yes 49 86.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 18184431 - NM_001290024 IL12RB1 1 3.62 2.14 58 6.46 71.29 29 5.7 Yes 16 0.31 No 23 0.4 Yes -28 0.68 Yes 42 65.13 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 18186960 - NM_001290024 IL12RB1 1 0.2 0.13 8 7.21 88.22 27 5.61 Yes 31 1.25 Yes 0 0 No -26 0.91 Yes 44 91.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18193087 - NM_001290024 IL12RB1 1 1.39 0.94 43 1.63 0 10 3.44 No 34 -1.7 No 28 0.26 Yes -26 0.54 No 42 55.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 18193094 - NM_001290024 IL12RB1 1 0.41 0.22 13 3.17 69.38 22 5.29 No 74 -3.3 No 28 0.26 Yes -21 0.48 No 49 53.73 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 18193131 - NM_001290024 IL12RB1 1 0.67 0.39 19 0.15 0 18 4.47 No 63 -4.35 No 0 0 No -20 0.72 Yes 53 71.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 18195646 - NM_001290024 IL12RB1 1 0.18 0.15 11 12.21 96.13 18 6.16 Yes 5 1.04 Yes 0 0 No -17 0.77 Yes 53 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18197383 - NM_001290024 IL12RB1 1 0.21 0.18 11 9.6 78.99 23 5.36 No 66 0.95 Yes 0 0 No -22 0.85 Yes 48 89.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 142609974 + NR_037840 IL15 1 8.93 1.03 42 6.29 89 25 4.64 No 27 1.08 Yes 24 0.85 Yes -24 0.86 Yes 46 90.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 142607588 + NR_037840 IL15 1 1.21 0.17 10 5.47 84.77 29 6.74 Yes 13 0.45 No 0 0 No -28 0.68 Yes 42 70.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 142609974 + NR_037840 IL15 1 127.99 14.6 72 6.29 89 25 4.64 No 27 1.08 Yes 24 0.85 Yes -24 0.86 Yes 46 90.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 142640481 + NR_037840 IL15 1 1.96 0.26 13 9.5 82.99 28 6.32 Yes 15 1.25 Yes 21 0.6 Yes -27 0.9 Yes 43 89.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 142640530 + NR_037840 IL15 1 9.38 1.06 47 3.05 0 20 4.58 No 64 1.19 Yes 21 0.6 Yes -19 0.8 Yes 51 75.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 142642211 + NR_037840 IL15 1 136.84 14.35 72 11.02 83.06 21 8.14 Yes 8 1.5 Yes 20 0.75 Yes -20 0.58 No 46 46.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 5995290 - NM_001256765 IL15RA 1 26.82 8.43 72 7.74 79 29 5.55 No 16 1.16 Yes 28 0.84 Yes -28 0.84 Yes 42 91.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 6000315 - NM_001256765 IL15RA 1 0.59 0.29 18 7.77 86.15 21 6.59 Yes 8 1.4 Yes 20 0.86 Yes -20 0.84 Yes 50 90.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 6002432 - NM_001256765 IL15RA 1 3.32 1.14 45 6.44 86.64 26 6.08 Yes 13 0.84 Yes 25 0.87 Yes -25 0.83 Yes 45 93.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 6002432 - NM_001256765 IL15RA 1 1.4 0.42 23 6.44 86.64 26 6.08 Yes 13 0.84 Yes 25 0.87 Yes -25 0.83 Yes 45 93.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 6002719 - NM_001256765 IL15RA 1 0.44 0.17 9 0.55 71.98 21 4.69 No 31 1.49 Yes 0 0 No -20 0.71 Yes 50 72.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 6002719 - NM_001256765 IL15RA 1 0.88 0.24 15 0.55 71.98 21 4.69 No 31 1.49 Yes 0 0 No -20 0.71 Yes 50 72.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 6005802 - NM_001256765 IL15RA 1 1.75 0.46 23 -9.9 74.01 34 5.1 No 76 0.85 Yes 21 0.5 Yes -24 0.6 No 46 54.06 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 6005861 - NM_001256765 IL15RA 1 0.87 0.22 13 3.03 71.87 30 6.58 Yes 17 0.87 Yes 0 0 No -29 0.8 Yes 41 82.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 81587672 + NM_001172128 IL16 1 0.91 0.25 14 6.52 84.14 19 5.64 Yes 56 -1.45 No 35 0.16 Yes -35 0.4 No 34 32.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 81591644 + NM_001172128 IL16 1 4.02 3.85 62 5.4 88.61 34 8.59 Yes 21 1.76 Yes 33 0.63 Yes -33 0.89 Yes 37 94.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 81591695 + NM_001172128 IL16 1 0.22 0.18 10 3.5 67.63 22 5.53 No 72 1.68 Yes 29 0.51 Yes -21 0.91 Yes 49 92.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 81591844 + NM_001172128 IL16 1 1.46 1.07 44 1.32 58.17 23 6.24 Yes 10 1.14 Yes 26 0.74 Yes -22 0.84 Yes 48 80.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 81591884 + NM_001172128 IL16 1 1.71 1.67 56 5.38 79.59 27 4.91 No 50 1.13 Yes 26 0.74 Yes -26 0.52 No 46 41.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 81592706 + NM_001172128 IL16 1 1.1 1.18 42 7.22 83.9 43 7.22 Yes 57 -2.34 No 0 0 No -45 0.58 No 25 59.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 81598256 + NM_001172128 IL16 1 0.08 0.1 7 -0.12 0 11 4.12 No 75 2.07 Yes 0 0 No -28 0.87 Yes 42 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 81598760 + NM_001172128 IL16 1 143.19 50.39 72 5.28 89.03 25 5.2 No 12 1.63 Yes 24 0.97 Yes -24 0.93 Yes 46 96.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 81600408 + NM_001172128 IL16 1 0.65 0.69 33 9.22 90.49 25 5.2 No 12 0.21 No 0 0 No -25 0.41 No 53 57.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 81600951 + NM_001172128 IL16 1 0.24 0.19 12 -2.57 0 14 3.87 No 13 1.02 Yes 0 0 No -28 0.46 No 42 56.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 17568851 + NM_001289905 IL17RA 1 4.59 0.92 36 6.93 90.42 25 6.04 Yes 12 1.58 Yes 0 0 No -24 0.76 Yes 40 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 17578023 + NM_001289905 IL17RA 1 0.47 0.11 7 2.47 74.82 41 5.39 No 32 1.17 Yes 0 0 No -40 0.77 Yes 30 83.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 17580039 + NM_001289905 IL17RA 1 0.55 0.17 10 6.03 71.52 31 5.94 Yes 26 2.31 Yes 0 0 No -30 0.94 Yes 40 91.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53886029 + NM_018725 IL17RB 1 1.48 1.51 47 -2.52 0 38 6.45 Yes 25 0.5 No 0 0 No -37 0.7 Yes 33 71.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53890405 + NM_018725 IL17RB 1 0.75 0.61 33 8.23 81.56 36 5.91 Yes 64 1.79 Yes 0 0 No -31 0.38 No 42 59.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 53891651 + NM_018725 IL17RB 1 0.54 0.47 25 -3.06 0 13 3.75 No 14 1.36 Yes 0 0 No -36 0.57 No 37 56.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 53891977 + NM_018725 IL17RB 1 0.57 0.28 15 10.03 90.35 21 4.82 No 27 1.94 Yes 0 0 No -27 0.38 No 43 75.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 53892375 + NM_018725 IL17RB 1 3.89 1.65 50 4.52 91.85 21 5 No 35 0.56 No 0 0 No -20 0.41 No 50 58.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53892597 + NM_018725 IL17RB 1 4.29 1.71 52 5.79 80.29 21 4.69 No 18 0.41 No 0 0 No -20 0.94 Yes 50 92.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53892774 + NM_018725 IL17RB 1 0.26 0.13 9 4.55 78.56 27 6.16 Yes 14 1.93 Yes 0 0 No -26 0.83 Yes 44 90.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53892821 + NM_018725 IL17RB 1 0.33 0.17 8 8.08 75.74 31 5.48 No 61 1.89 Yes 0 0 No -26 0.55 No 44 40.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 53894645 + NM_018725 IL17RB 1 0.22 0.13 8 3.73 71.16 31 5.6 Yes 73 0.82 Yes 0 0 No -30 0.8 Yes 40 82.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53894665 + NM_018725 IL17RB 1 0.29 0.26 12 2.83 75.18 29 4.95 No 5 0.08 No 0 0 No -28 0.54 No 42 47.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53895342 + NM_018725 IL17RB 1 0.15 0.11 7 5.7 81.69 38 6.15 Yes 58 -1.67 No 0 0 No -28 0.5 No 42 74.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 53897025 + NM_018725 IL17RB 1 0.22 0.11 7 6.09 84.79 26 6.16 Yes 13 2.55 Yes 0 0 No -25 0.91 Yes 45 94.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53898776 + NM_018725 IL17RB 1 1.21 0.64 33 0.95 0 29 6.14 Yes -4 0.45 No 0 0 No -28 0.46 No 42 71.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 53898905 + NM_018725 IL17RB 1 5.16 3.17 65 6.46 70.42 23 5.84 Yes 10 1 Yes 0 0 No -26 0.82 Yes 44 89.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 102979094 + NM_003855 IL18R1 1 0.55 0.11 7 -0.21 78.47 27 6.61 Yes 14 1.27 Yes 24 0.84 Yes -26 0.71 Yes 44 84.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 102984112 + NM_003855 IL18R1 1 2.26 0.49 25 5.99 80.77 22 5.1 No 63 1.47 Yes 0 0 No -21 0.9 Yes 49 83.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 102989770 + NM_003855 IL18R1 1 0.78 0.31 19 8.17 86.17 14 3.81 No 1 0.52 No 0 0 No -21 0.58 No 49 82.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 102990396 + NM_003855 IL18R1 1 7.63 2.75 57 10.06 79.76 32 4.96 No 19 1.39 Yes 31 0.85 Yes -31 0.65 No 39 82.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 103010967 + NM_003855 IL18R1 1 0.9 0.35 19 5.5 73.11 25 6.93 Yes 12 0.77 Yes 0 0 No -29 0.53 No 41 61.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 102772605 + NM_001288706 IL1R1 1 23.14 2.44 56 6.05 78.58 31 8.26 Yes 18 1.81 Yes 30 0.88 Yes -30 0.92 Yes 40 88.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 102774181 + NM_001288706 IL1R1 1 5.03 0.65 27 1.87 76.79 47 7.55 Yes 34 1.68 Yes 0 0 No -46 0.79 Yes 24 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27444645 + NM_021798 IL21R 1 0.06 0.15 8 0.8 71.27 37 7.73 Yes 24 0.61 No 0 0 No -36 0.43 No 34 35.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 27445451 + NM_021798 IL21R 1 0.14 0.43 22 7.3 78.16 22 6.83 Yes 45 0.29 No 0 0 No -21 0.57 No 46 59.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 27445589 + NM_021798 IL21R 1 0.2 0.58 30 8.9 88.24 46 5.86 Yes 40 1.16 Yes 0 0 No -45 0.55 No 25 80.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 27445642 + NM_021798 IL21R 1 0.05 0.14 9 0.15 70.23 18 3.58 No NA NA NA 31 0.35 Yes -24 0.67 Yes 53 41.9 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 27445711 + NM_021798 IL21R 1 0.12 0.32 17 3.28 81.41 54 7.28 Yes 41 1.45 Yes 0 0 No -29 0.6 No 55 47.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 27445971 + NM_021798 IL21R 1 0.2 0.69 35 9.55 85.9 26 5.45 No -2 0.91 Yes 0 0 No -25 0.95 Yes 45 91.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27447451 + NM_021798 IL21R 1 0.45 1.39 50 10.36 85.9 26 5.46 No 71 -1.97 No 0 0 No -25 0.94 Yes 45 92.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 27448781 + NM_021798 IL21R 1 0.42 1.39 47 7.15 81.09 36 6.32 Yes 23 1.61 Yes 22 0.79 Yes -35 0.51 No 35 58.43 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 27454287 + NM_021798 IL21R 1 0.05 0.13 8 -5.01 0 40 7.55 Yes 27 1.94 Yes 0 0 No -39 0.97 Yes 31 97.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27454239 + NM_021798 IL21R 1 0.05 0.17 10 8.55 89.35 23 6.67 Yes 10 0.39 No 34 0.83 Yes -22 0.75 Yes 48 81.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 27454267 + NM_021798 IL21R 1 0.2 0.61 28 2.36 0 20 6.08 Yes 7 1.98 Yes 34 0.83 Yes -19 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 27454268 + NM_021798 IL21R 1 0.13 0.33 17 2.84 0 21 6.16 Yes 8 1.98 Yes 34 0.83 Yes -20 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 27454287 + NM_021798 IL21R 1 1.06 2.99 68 -5.01 0 40 7.55 Yes 27 1.94 Yes 0 0 No -39 0.97 Yes 31 97.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27454324 + NM_021798 IL21R 1 0.28 0.76 36 7.68 86.46 17 6.21 Yes 64 1.93 Yes 0 0 No -22 0.87 Yes 48 85.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27455520 + NM_021798 IL21R 1 0.03 0.11 7 2.83 70.11 23 5.38 No 26 -3.42 No 0 0 No -22 0.66 No 48 58.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 27456499 + NM_021798 IL21R 1 0.69 1.92 58 -7.43 72.97 27 6.92 Yes 14 1.52 Yes 24 0.91 Yes -26 0.63 No 39 61.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 27456505 + NM_021798 IL21R 1 0.04 0.1 7 -6.07 0 11 3.87 No 20 1.48 Yes 0 0 No -32 0.61 No 33 65.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 67666490 + NM_144701 IL23R 1 1.63 0.15 9 4.46 74.37 25 6.11 Yes 12 1.09 Yes 0 0 No -24 0.71 Yes 46 65.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 14146779 + NM_004843 IL27RA 1 1.28 2.04 59 4.95 71.82 22 5.21 No 9 0.89 Yes 0 0 No -21 0.79 Yes 49 86.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14150549 + NM_004843 IL27RA 1 1.44 2.19 62 3.48 67.95 13 5.57 Yes 0 0.15 No 22 0.84 Yes -24 0.36 No 58 63.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 14153536 + NM_004843 IL27RA 1 0.08 0.11 8 -4.29 0 12 4.24 No 27 1.2 Yes 0 0 No -39 0.92 Yes 31 92.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14158187 + NM_004843 IL27RA 1 0.07 0.14 8 4.3 84.41 25 6.08 Yes 12 2.16 Yes 0 0 No -24 0.91 Yes 46 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14162911 + NM_004843 IL27RA 1 0.52 0.76 36 -3.65 0 17 3.94 No 4 1.06 Yes 0 0 No -22 0.86 Yes 48 77.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 6081706 - NM_000417 IL2RA 1 1.37 0.29 12 9.37 87.21 34 5.83 Yes 75 -4.44 No 0 0 No -27 0.63 No 43 56.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 37524851 - NM_001346222 IL2RB 1 0.09 0.21 13 7.76 85.14 44 6.48 Yes 53 2.1 Yes 0 0 No -43 0.31 No 46 40.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 37524886 - NM_001346222 IL2RB 1 0.32 0.78 34 -0.62 68.76 31 6.93 Yes 18 2.06 Yes 0 0 No -30 0.97 Yes 40 95.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37526836 - NM_001346222 IL2RB 1 0.05 0.14 9 3.97 77.8 19 5 No 35 0.33 No 0 0 No -19 0.36 No 51 45.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 37531653 - NM_001346222 IL2RB 1 0.1 0.25 15 9.33 83.54 13 4.76 No 0 0.02 No 0 0 No -20 0.52 No 42 65.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 37532362 - NM_001346222 IL2RB 1 0.05 0.13 7 -6.17 0 16 4.12 No 3 0.89 Yes 0 0 No -15 0.86 Yes 62 47.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 37532431 - NM_001346222 IL2RB 1 0.12 0.36 19 -11.31 69.21 25 5.39 No 12 1.91 Yes 0 0 No -24 0.92 Yes 46 91.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37538573 - NM_001346222 IL2RB 1 0.37 0.92 43 5.84 80.16 32 6.16 Yes 37 -1.24 No 23 0.92 Yes -31 0.72 Yes 40 81.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 37538602 - NM_001346222 IL2RB 1 0.44 1.13 41 -1.76 72.46 21 4.69 No 8 -1.16 No 0 0 No -20 0.9 Yes 50 24.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 37538792 - NM_001346222 IL2RB 1 0.38 0.88 38 6.51 82.29 20 5 No 63 -2.37 No 19 0.65 Yes -19 0.79 Yes 51 72.77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 70328239 - NM_000206 IL2RG 1 0.01 0.15 7 -10.6 47.82 10 4.69 No 32 0.34 No 37 0.78 Yes -44 0.79 Yes 18 27.16 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 70328544 - NM_000206 IL2RG 1 0.18 1.13 42 -1.11 83.92 33 6.2 Yes 73 -3.72 No 0 0 No -33 0.75 Yes 37 60.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 70329200 - NM_000206 IL2RG 1 0.03 0.24 13 3.94 76.92 17 4.8 No 47 1.43 Yes 0 0 No -23 0.72 Yes 47 58.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 70329200 - NM_000206 IL2RG 1 0.06 0.36 20 3.94 76.92 17 4.8 No 47 1.43 Yes 0 0 No -23 0.72 Yes 47 58.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 70329231 - NM_000206 IL2RG 1 0.03 0.21 11 -5.13 0 14 4.36 No 16 1.43 Yes 0 0 No -48 0.58 No 22 80.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 70329275 - NM_000206 IL2RG 1 0.01 0.1 7 8.9 78.64 20 6.05 Yes 7 0.76 No 38 0.72 Yes -19 0.58 No 51 56.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 70329275 - NM_000206 IL2RG 1 0.04 0.28 17 8.9 78.64 20 6.05 Yes 7 0.76 No 38 0.72 Yes -19 0.58 No 51 56.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 70329275 - NM_000206 IL2RG 1 0.02 0.14 9 8.9 78.64 20 6.05 Yes 7 0.76 No 38 0.72 Yes -19 0.58 No 51 56.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 70330183 - NM_000206 IL2RG 1 0.08 0.68 33 4.99 78.02 20 5.04 No -2 0.85 Yes 25 0.81 Yes -19 0.49 No 51 81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 70330841 - NM_000206 IL2RG 1 0.02 0.19 12 6.99 84.44 26 5.65 Yes 21 1.75 Yes 0 0 No -25 0.62 No 45 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 70331069 - NM_000206 IL2RG 1 0.02 0.14 10 4.38 0 56 8.77 Yes 43 2.44 Yes 0 0 No -55 0.86 Yes 15 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3118729 + NM_001012636 IL32 1 0.23 0.46 24 6.4 78.72 44 6.55 Yes 1 0.44 No 0 0 No -21 0.51 No 49 53.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50393698 - NM_001258017 IL4I1 1 0.09 0.14 9 2.25 64.89 30 6 Yes 72 -2.63 No 0 0 No -33 0.58 No 38 38.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50393731 - NM_001258017 IL4I1 1 2 3.76 66 4.89 74.78 31 5.74 Yes 66 1.22 Yes 0 0 No -30 0.82 Yes 48 30.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 50393755 - NM_001258017 IL4I1 1 0.1 0.24 15 -0.05 70.05 55 7.81 Yes 42 1.22 Yes 0 0 No -54 0.53 No 16 48.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 50394762 - NM_001258017 IL4I1 1 0.11 0.28 15 5.94 68.69 20 5.06 No 69 -2.5 No 28 0.87 Yes -21 0.49 No 38 45.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 50396225 - NM_001258017 IL4I1 1 0.06 0.17 10 11.77 87.46 27 5.74 Yes 49 0.79 Yes 0 0 No -26 0.33 No 44 41.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 27329955 + NM_000418 IL4R 1 1.28 0.22 15 12.21 86.77 18 5.43 No 5 2.13 Yes 21 0.87 Yes -21 0.87 Yes 49 70.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 27345636 + NM_000418 IL4R 1 3.54 0.79 36 5.96 85.74 37 9.76 Yes 56 2.04 Yes 36 0.87 Yes -36 0.93 Yes 34 97.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 27350219 + NM_000418 IL4R 1 0.56 0.11 8 5.73 90.14 28 5.29 No 21 -1.47 No 0 0 No -52 0.38 No 22 52.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 27352390 + NM_000418 IL4R 1 4.15 1.93 55 5 78.22 19 5.8 Yes 70 -4.04 No 23 0.66 Yes -21 0.66 Yes 47 79.92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 27355914 + NM_000418 IL4R 1 1.71 1 44 9.16 84.51 39 6.48 Yes 31 0.37 No 0 0 No -38 0.57 No 32 75.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 27356694 + NM_000418 IL4R 1 0.32 0.14 10 2.82 73.54 47 6.67 Yes 38 0.42 No 0 0 No -29 0.45 No 41 58.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 27363865 + NM_000418 IL4R 1 1.81 1.14 45 3.93 0 28 8.66 Yes 15 2.09 Yes 22 0.86 Yes -27 0.9 Yes 43 91.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 27366340 + NM_000418 IL4R 1 0.3 0.11 7 6.79 83.7 33 6.36 Yes 2 1.17 Yes 25 0.68 Yes -30 0.63 No 40 50.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 27367135 + NM_000418 IL4R 1 0.76 0.4 26 2.04 0 16 4 No 28 1.47 Yes 0 0 No -30 0.87 Yes 40 89.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27372260 + NM_000418 IL4R 1 0.58 0.28 16 -0.7 65.63 19 6.25 Yes 6 1.23 Yes 26 0.59 Yes -48 0.44 No 22 51.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 154407470 + NM_000565 IL6R 1 0.67 0.24 15 2.16 0 19 4.15 No 6 1.46 Yes 24 0.75 Yes -24 0.89 Yes 46 83.15 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154417522 + NM_000565 IL6R 1 0.86 0.22 13 8.18 83.6 33 5.64 Yes 72 -2.91 No 31 0.43 Yes -31 0.4 No 39 72.66 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 154409910 + NM_000565 IL6R 1 1.8 0.56 25 5.4 85.05 25 7.5 Yes 12 0.75 No 0 0 No -24 0.82 Yes 46 83.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154417522 + NM_000565 IL6R 1 4.89 1.26 38 8.18 83.6 33 5.64 Yes 72 -2.91 No 31 0.43 Yes -31 0.4 No 39 72.66 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 154426548 + NM_000565 IL6R 1 1.55 0.32 17 6.3 81.08 40 5.01 No 62 0.71 No 25 0.5 Yes -35 0.63 No 35 56.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 55242112 - NM_175767 IL6ST 1 0.32 0.28 14 5.47 79.97 26 3.83 No 74 -5.28 No 0 0 No -25 0.69 Yes 45 70 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 55244811 - NM_175767 IL6ST 1 0.33 0.39 19 6.98 81.11 31 7.07 Yes 18 1.6 Yes 26 0.66 Yes -30 0.68 Yes 40 64.75 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 55276884 - NM_175767 IL6ST 1 0.15 0.17 12 3.78 78.49 39 6.64 Yes 40 1.11 Yes 0 0 No -38 0.63 No 32 58.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 79646064 - NM_000880 IL7 1 1.06 0.14 8 -3.58 0 36 3.93 No 8 0.22 No 24 0.69 Yes -28 0.68 Yes 42 74.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 79659332 - NM_000880 IL7 1 1.73 0.14 10 5.6 77.83 35 6.85 Yes 22 0.57 No 0 0 No -34 0.67 Yes 36 67.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 79672279 - NM_000880 IL7 1 1.05 0.18 9 7.85 87.21 18 4.69 No 5 0.91 Yes 0 0 No -25 0.4 No 45 47.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 79681105 - NM_000880 IL7 1 2.38 0.32 17 3.05 68.79 73 8.34 Yes 57 0.27 No 0 0 No -28 0.41 No 42 78.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 79706568 - NM_000880 IL7 1 1.15 0.18 8 5.88 86.7 21 6.85 Yes 8 1.18 Yes 0 0 No -20 0.6 No 50 73.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 79707365 - NM_000880 IL7 1 1.96 0.22 13 3.87 73.83 23 5.14 No 6 0.97 Yes 0 0 No -22 0.89 Yes 48 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121724719 - NM_001199800 ILDR1 1 0.44 0.1 7 5.5 90.92 28 5.29 No 15 -0.35 No 0 0 No -27 0.66 No 43 49.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 153636605 - NM_004515 ILF2 1 0.05 0.43 21 -11.62 75.68 34 6.13 Yes 15 0.38 No 0 0 No -33 0.6 No 43 57.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 153637811 - NM_004515 ILF2 1 0.02 0.21 14 -23.66 0 31 5.29 No 33 0.65 No 0 0 No -30 0.65 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 153637812 - NM_004515 ILF2 1 0.05 0.51 26 -9.91 0 30 5.21 No 32 0.65 No 0 0 No -29 0.67 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 153637837 - NM_004515 ILF2 1 0.01 0.14 7 -4.61 0 9 3.87 No 22 -2.83 No 28 0.85 Yes -33 0.41 No 37 56.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 153641032 - NM_004515 ILF2 1 0.02 0.11 7 -21.83 0 16 5.48 No 3 0.09 No 0 0 No -23 0.43 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 153641053 - NM_004515 ILF2 1 0.11 0.72 36 -6.33 0 13 4 No 57 1.39 Yes 22 0.18 Yes -50 0.45 No 20 56.37 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 153641367 - NM_004515 ILF2 1 0.03 0.18 11 1.96 0 21 7.4 Yes 33 1.11 Yes 0 0 No -24 0.72 Yes 46 64.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 153642385 - NM_004515 ILF2 1 0.05 0.25 9 6.18 79.72 56 8.17 Yes 43 1.52 Yes 24 0.73 Yes -24 0.96 Yes 46 93.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10765731 + NM_017620 ILF3 1 0.4 1.64 54 12.05 94.11 15 5.07 No NA NA NA 0 0 No -26 0.6 No 44 47.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10777167 + NM_017620 ILF3 1 0.89 3.63 69 4.66 70.84 29 6.38 Yes 59 0.93 Yes 28 0.34 Yes -31 0.58 No 39 76.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 10777258 + NM_017620 ILF3 1 0.08 0.31 18 5.69 71.37 35 6.16 Yes 22 0.57 No 0 0 No -34 0.91 Yes 36 87.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10781261 + NM_017620 ILF3 1 0.06 0.26 15 1.61 0 21 4.57 No 62 -3.93 No 28 0.4 Yes -20 0.64 No 53 59.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 10781722 + NM_017620 ILF3 1 0.05 0.38 21 -1.49 66.62 35 5.83 Yes 22 0.38 No 0 0 No -34 0.7 Yes 36 62.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 10791870 + NM_017620 ILF3 1 0.02 0.11 7 5.1 83.33 19 5.39 No 6 0.78 Yes 26 0.63 Yes -18 0.72 Yes 52 84.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10791899 + NM_017620 ILF3 1 0.16 0.99 36 1.95 0 28 6.04 Yes 35 0.78 Yes 0 0 No -31 0.68 Yes 40 60.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 10793812 + NM_017620 ILF3 1 0.05 0.13 8 -3.32 0 15 4.58 No 33 1.01 Yes 33 0.73 Yes -45 0.76 Yes 25 88.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10793812 + NM_017620 ILF3 1 0.28 0.69 31 -3.32 0 15 4.58 No 33 1.01 Yes 33 0.73 Yes -45 0.76 Yes 25 88.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10793812 + NM_017620 ILF3 1 127.69 316.29 72 -3.32 0 15 4.58 No 33 1.01 Yes 33 0.73 Yes -45 0.76 Yes 25 88.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10793815 + NM_017620 ILF3 1 3.63 9.14 72 -4.14 66.27 18 4.85 No 36 1 Yes 0 0 No -48 0.76 Yes 22 85.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10795091 + NM_017620 ILF3 1 212.07 252.53 72 11.91 82.94 36 7.14 Yes 23 1.66 Yes 35 0.89 Yes -35 0.86 Yes 35 93.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10795534 + NM_017620 ILF3 1 4.95 5.94 72 9.99 85.08 35 6.75 Yes 22 1.15 Yes 24 0.8 Yes -24 0.66 No 46 50.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 10795537 + NM_017620 ILF3 1 0.46 0.56 28 5.94 84.41 38 6.95 Yes 25 1.15 Yes 0 0 No -27 0.67 Yes 33 45.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 10795597 + NM_017620 ILF3 1 2.33 2.83 61 4.07 75.16 68 6.94 Yes 75 0.73 No 24 0.46 Yes -34 0.58 No 36 68.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 10798596 + NM_017620 ILF3 1 0.14 0.25 18 7.8 82.4 43 8.25 Yes 30 0.76 No 0 0 No -27 0.65 No 28 69.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10799857 + NM_017620 ILF3 1 0.05 0.14 10 -3.28 79.69 25 7.75 Yes 12 1.73 Yes 0 0 No -24 0.86 Yes 46 91.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 6626082 + NM_001014795 ILK 1 0.24 0.36 23 4.89 85.89 22 4.85 No 14 0.52 No 22 0.71 Yes -26 0.66 Yes 44 79.44 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 6626496 + NM_001014795 ILK 1 0.08 0.1 7 4.38 72.39 11 5.57 Yes 65 -5.3 No 0 0 No -21 0.67 Yes 49 75.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 6629247 + NM_001014795 ILK 1 0.16 0.21 11 8.74 80.83 28 6.26 Yes 36 0.4 No 25 0.82 Yes -34 0.32 No 36 32.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 6631752 + NM_001014795 ILK 1 0.13 0.18 11 4.5 64.5 29 5.65 Yes -1 0.49 No 0 0 No -28 0.54 No 42 85.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 239086605 - NM_030768 ILKAP 1 0.41 0.38 21 8.27 87.73 30 4.16 No 48 0.33 No 0 0 No -30 0.47 No 38 70.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 239087127 - NM_030768 ILKAP 1 1.66 1.54 46 3.65 76.33 26 5.46 No 67 0.43 No 0 0 No -25 0.8 Yes 45 63.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 239103344 - NM_030768 ILKAP 1 0.85 0.81 40 7.55 83.53 36 7.12 Yes 23 1.18 Yes 35 0.79 Yes -35 0.88 Yes 35 94.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 15227331 - NM_006844 ILVBL 1 0.29 0.11 7 -6.95 74.35 30 5.83 Yes 49 0.41 No 0 0 No -27 0.65 No 43 81.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 15227465 - NM_006844 ILVBL 1 0.27 0.11 7 11.69 92 18 6.4 Yes 5 1.09 Yes 0 0 No -17 0.69 Yes 53 85.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 15228784 - NM_006844 ILVBL 1 2.75 1.25 50 5.31 71.98 32 7.21 Yes 19 1.22 Yes 22 0.58 Yes -31 0.91 Yes 39 95.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 15230858 - NM_006844 ILVBL 1 0.6 0.21 12 9.01 88.76 22 5.72 Yes 9 0.52 No 0 0 No -29 0.82 Yes 41 62.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 31470639 - NM_144981 IMMP1L 1 6.42 1.63 55 6.27 93.71 24 5.09 No 39 0.87 Yes 23 0.91 Yes -23 0.73 Yes 47 83.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 31470639 - NM_144981 IMMP1L 1 0.7 0.18 11 6.27 93.71 24 5.09 No 39 0.87 Yes 23 0.91 Yes -23 0.73 Yes 47 83.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 31470639 - NM_144981 IMMP1L 1 1.41 0.33 18 6.27 93.71 24 5.09 No 39 0.87 Yes 23 0.91 Yes -23 0.73 Yes 47 83.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 31474640 - NM_144981 IMMP1L 1 29.24 6.93 71 8.03 90.57 29 4.67 No 13 0.12 No 28 0.75 Yes -28 0.52 No 42 75.47 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 31474640 - NM_144981 IMMP1L 1 1.26 0.28 15 8.03 90.57 29 4.67 No 13 0.12 No 28 0.75 Yes -28 0.52 No 42 75.47 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 110365832 - NM_032549 IMMP2L 1 1.04 0.11 8 6.07 80.68 27 5.66 Yes 67 0.96 Yes 0 0 No -26 0.66 No 44 75.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 110525871 - NM_032549 IMMP2L 1 1.02 0.14 9 8.7 89.33 26 6.87 Yes 13 1.31 Yes 0 0 No -29 0.46 No 45 77.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 111132571 - NM_032549 IMMP2L 1 2.07 0.46 23 7.66 87.85 14 5.66 Yes 40 0.2 No 0 0 No -25 0.91 Yes 45 86.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 111172642 - NM_032549 IMMP2L 1 3.65 0.61 30 4.9 67.33 36 7.68 Yes 23 1.54 Yes 35 0.7 Yes -35 0.88 Yes 35 90.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 111174924 - NM_032549 IMMP2L 1 3.04 0.5 25 5.47 85.89 32 6.35 Yes 11 0.77 Yes 0 0 No -31 0.81 Yes 39 91.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 111199650 - NM_032549 IMMP2L 1 1.08 0.17 11 5.76 95.01 28 5.77 Yes 33 1.73 Yes 0 0 No -27 0.74 Yes 43 69.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86380689 - NM_001100170 IMMT 1 0.05 0.18 10 0.81 0 18 2.95 No 50 0.57 No 0 0 No -35 0.72 Yes 35 48.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 86393762 - NM_001100170 IMMT 1 0.38 1 38 1.47 0 9 3.55 No 16 1.45 Yes 0 0 No -28 0.81 Yes 42 87.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86397962 - NM_001100170 IMMT 1 0.07 0.21 11 -11.07 0 9 3.87 No 29 1.26 Yes 23 0.68 Yes -40 0.4 No 29 67.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 86397965 - NM_001100170 IMMT 1 31.88 88.46 72 -2.41 68.84 39 7.32 Yes 26 1.26 Yes 28 0.82 Yes -31 0.46 No 32 67.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 86398412 - NM_001100170 IMMT 1 0.18 0.51 31 5.7 78.06 19 5.48 No 59 0.86 Yes 0 0 No -26 0.72 Yes 44 75.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86398433 - NM_001100170 IMMT 1 6.12 17.07 72 4.12 89.59 19 5.72 Yes 38 0.85 Yes 0 0 No -29 0.32 No 41 36.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 86398460 - NM_001100170 IMMT 1 0.35 1.06 40 -1.27 0 14 4.24 No 11 0.84 Yes 26 0.49 Yes -23 0.42 No 47 75.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 86398469 - NM_001100170 IMMT 1 60.16 168.17 72 3.06 71.23 15 5 No 2 0.87 Yes 21 0.5 Yes -21 0.62 No 49 73.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 86400879 - NM_001100170 IMMT 1 0.23 0.85 35 -2 0 16 3.87 No 13 0.74 No 0 0 No -38 0.39 No 32 64.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 131102202 + NM_001320309 IMP4 1 0.04 0.1 7 -12.06 0 30 5.63 Yes 17 1.8 Yes 0 0 No -29 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 131102950 + NM_001320309 IMP4 1 0.06 0.15 10 -22.19 0 46 5.3 No 18 0.7 No 0 0 No -30 0.63 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 131103630 + NM_001320309 IMP4 1 0.31 0.93 37 6.16 70.48 34 7 Yes 21 1.19 Yes 0 0 No -33 0.81 Yes 37 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 82586181 - NM_001144879 IMPA1 1 0.2 0.22 12 1.59 0 29 5.83 Yes 16 0.32 No 0 0 No -28 0.62 No 42 47.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 82587067 - NM_001144879 IMPA1 1 0.2 0.24 13 -2.12 0 45 4.88 No 17 0.51 No 29 0.46 Yes -29 0.39 No 38 59.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 82587072 - NM_001144879 IMPA1 1 0.24 0.22 15 0.11 63.32 40 4.62 No 12 0.52 No 29 0.46 Yes -24 0.41 No 43 57.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 82588501 - NM_001144879 IMPA1 1 0.97 0.74 33 5.49 82.99 22 4.76 No 33 0.78 Yes 31 0.83 Yes -21 0.48 No 49 49.56 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 82590925 - NM_001144879 IMPA1 1 1.47 0.97 37 8.27 85.05 33 6.53 Yes 20 0.26 No 32 0.76 Yes -32 0.5 No 38 61.34 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 82593015 - NM_001144879 IMPA1 1 3.63 3.42 69 -1.66 0 77 6.81 Yes 10 0.85 Yes 18 0.82 Yes -22 0.77 Yes 48 78.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 82593796 - NM_001144879 IMPA1 1 0.76 0.68 30 -0.31 69.72 16 5.72 Yes 61 1.38 Yes 0 0 No -26 0.43 No 44 57.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 82593799 - NM_001144879 IMPA1 1 2.31 1.96 63 4.49 79.25 13 5.45 No 58 1.39 Yes 25 0.52 Yes -23 0.38 No 47 46.15 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 82595798 - NM_001144879 IMPA1 1 0.14 0.14 9 4.66 77.15 32 10.14 Yes 19 1.32 Yes 0 0 No -31 0.82 Yes 39 84.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 82595801 - NM_001144879 IMPA1 1 0.23 0.21 12 8.27 82.02 29 9.99 Yes 16 1.32 Yes 0 0 No -28 0.83 Yes 42 87.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 82598173 - NM_001144879 IMPA1 1 0.25 0.24 16 4.32 81.8 22 5.29 No 47 0.96 Yes 0 0 No -59 0.48 No 11 36.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 82598199 - NM_001144879 IMPA1 1 6.47 5.74 70 1.75 58.92 34 9.54 Yes 62 1.8 Yes 33 0.66 Yes -33 0.76 Yes 37 76.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 22023063 + NM_018439 IMPACT 1 1.48 0.53 26 7.22 88.11 22 6.38 Yes 9 0.37 No 0 0 No -21 0.91 Yes 49 86.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 22030745 + NM_018439 IMPACT 1 0.49 0.14 8 -5.8 82.77 21 6.32 Yes 8 1.34 Yes 21 0.79 Yes -24 0.82 Yes 46 93.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 57877159 - NM_017813 IMPAD1 1 0.1 0.1 7 2.51 0 17 4.29 No 1 0.2 No 0 0 No -17 0.7 Yes 53 56.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 57879778 - NM_017813 IMPAD1 1 3.21 4.4 69 9.62 93.33 26 6.05 Yes 13 1.74 Yes 25 0.85 Yes -25 0.58 No 45 81.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 57880558 - NM_017813 IMPAD1 1 0.69 0.88 38 9.52 91.2 38 7.92 Yes 25 1.14 Yes 0 0 No -37 0.63 No 33 78.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 57890248 - NM_017813 IMPAD1 1 0.06 0.11 7 5.94 74.4 50 6 Yes 65 0.21 No 0 0 No -39 0.56 No 24 70.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 128033793 - NM_001142573 IMPDH1 1 1.41 0.85 37 7.29 70.68 34 7.21 Yes 21 2.46 Yes 33 0.96 Yes -33 0.93 Yes 37 95.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 128035028 - NM_001142573 IMPDH1 1 0.31 0.19 13 2.19 86.66 16 4.69 No 66 1.67 Yes 0 0 No -58 0.37 No 55 40.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 128040259 - NM_001142573 IMPDH1 1 0.71 0.81 35 8.08 83.03 44 5.86 Yes 41 0.53 No 27 0.16 Yes -26 0.48 No 54 72.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 128040591 - NM_001142573 IMPDH1 1 0.51 0.28 15 -2.8 65.64 18 4.9 No 38 0.29 No 30 0.59 Yes -33 0.77 Yes 37 87.4 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 128041263 - NM_001142573 IMPDH1 1 0.2 0.17 8 7.89 83.32 30 6.7 Yes 17 1.02 Yes 0 0 No -29 0.95 Yes 41 97.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49063500 - NM_000884 IMPDH2 1 0.64 4.08 69 5.74 83.89 27 8.37 Yes 14 1.03 Yes 26 0.89 Yes -26 0.77 Yes 44 86.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 49064031 - NM_000884 IMPDH2 1 0.33 2.81 61 2.51 0 15 4.58 No 20 0.95 Yes 0 0 No -32 0.87 Yes 44 80.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49064263 - NM_000884 IMPDH2 1 0.1 0.6 30 4.6 76.03 31 5.76 Yes 52 1.39 Yes 0 0 No -27 0.66 No 43 73.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 49064296 - NM_000884 IMPDH2 1 0.23 1.32 47 0.24 65.58 29 5.29 No 19 1.37 Yes 0 0 No -31 0.49 No 39 15.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49065349 - NM_000884 IMPDH2 1 0.03 0.17 12 -11.19 0 17 6.2 Yes 4 1.61 Yes 0 0 No -28 0.72 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 49066199 - NM_000884 IMPDH2 1 0.45 2.38 59 4.57 80.99 40 7.07 Yes 27 1.48 Yes 0 0 No -39 0.71 Yes 31 78.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61893851 + NM_020238 INCENP 1 0.28 0.25 13 4.83 83.88 19 5.48 No 6 1.11 Yes 0 0 No -18 0.46 No 43 61.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 61895626 + NM_020238 INCENP 1 0.32 0.26 16 3.06 0 35 7.94 Yes 22 2.17 Yes 0 0 No -34 0.89 Yes 36 91.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61908971 + NM_020238 INCENP 1 88.29 36.43 72 10.47 84.15 32 7.87 Yes 19 1.98 Yes 31 0.88 Yes -31 0.92 Yes 39 93.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 61919265 + NM_020238 INCENP 1 0.13 0.15 11 1.94 78.97 22 4.9 No 9 1.01 Yes 0 0 No -21 0.97 Yes 49 95.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105177218 + NM_022489 INF2 1 0.47 0.17 9 3.77 77.57 16 4.21 No 70 -3.42 No 0 0 No -25 0.58 No 45 35.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 105177255 + NM_022489 INF2 1 0.28 0.11 7 -3.18 0 16 3.63 No NA NA NA 20 0.46 Yes -15 0.39 No 50 27.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 105179538 + NM_022489 INF2 1 1.27 0.46 24 1.42 70.61 20 6.78 Yes 61 -4.43 No 24 0.91 Yes -19 0.86 Yes 51 68.99 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 105179785 + NM_022489 INF2 1 1.39 0.53 27 1.48 0 24 5.48 No 11 1.14 Yes 0 0 No -23 0.88 Yes 47 82.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105180157 + NM_022489 INF2 1 0.17 0.1 7 6.76 79.35 28 5.39 No 38 1.8 Yes 0 0 No -27 0.91 Yes 43 93.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105181617 + NM_022489 INF2 1 1.27 0.22 14 1.97 79.05 24 5.48 No 11 0.81 Yes 26 0.89 Yes -23 0.86 Yes 47 82.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105183899 + NM_022489 INF2 1 1.77 0.49 25 8.89 84.81 23 4.86 No 10 0.14 No 22 0.76 Yes -22 0.62 No 48 78.84 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 120596213 + NM_019071 ING3 1 15.32 12.01 72 5.69 92.69 22 4.84 No 53 0.21 No 21 0.86 Yes -22 0.64 No 48 62.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 120596216 + NM_019071 ING3 1 2 1.58 54 2.93 91.31 25 5.14 No 56 0.21 No 0 0 No -25 0.56 No 45 58.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 120604799 + NM_019071 ING3 1 0.12 0.1 7 -2.32 0 28 6.26 Yes 8 0.73 No 0 0 No -51 0.34 No 43 44.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 120607621 + NM_019071 ING3 1 0.31 0.31 18 2.49 69.03 28 6.61 Yes 15 0.45 No 0 0 No -28 0.47 No 43 48.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6761476 - NM_001127582 ING4 1 5.58 2.46 62 8.97 86.89 30 6.76 Yes 69 1.1 Yes 30 0.6 Yes -25 0.35 No 49 37.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 6761582 - NM_001127582 ING4 1 1.04 0.47 26 -5.98 59.34 31 6.48 Yes 18 1.01 Yes 0 0 No -30 0.83 Yes 40 89.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6761934 - NM_001127582 ING4 1 142.92 18.64 72 4.95 80.73 52 8.06 Yes 39 1.85 Yes 27 0.24 Yes -52 0.55 No 18 71.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 6765080 - NM_001127582 ING4 1 2.49 1.36 50 6.68 83.19 34 5.87 Yes -2 0.34 No 33 0.81 Yes -33 0.87 Yes 37 90.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6767019 - NM_001127582 ING4 1 0.48 0.31 16 6.14 88.68 22 6.24 Yes 9 1.13 Yes 21 0.91 Yes -21 0.97 Yes 49 94.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 242651395 + NM_001330161 ING5 1 1.28 0.61 28 1.62 85.78 28 7.03 Yes 15 0.36 No 0 0 No -27 0.5 No 36 66.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 115459863 - NM_001329588 INIP 1 4.13 0.36 18 6.3 82 26 6.93 Yes 13 0.92 Yes 0 0 No -25 0.89 Yes 45 91.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115459863 - NM_001329588 INIP 1 23.23 1.76 60 6.3 82 26 6.93 Yes 13 0.92 Yes 0 0 No -25 0.89 Yes 45 91.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115459863 - NM_001329588 INIP 1 2.88 0.24 13 6.3 82 26 6.93 Yes 13 0.92 Yes 0 0 No -25 0.89 Yes 45 91.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115461590 - NM_001329588 INIP 1 3.85 0.35 20 9.45 87.82 25 5.97 Yes 12 0.28 No 0 0 No -25 0.47 No 46 46.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 115461590 - NM_001329588 INIP 1 13.82 1.1 43 9.45 87.82 25 5.97 Yes 12 0.28 No 0 0 No -25 0.47 No 46 46.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 115463081 - NM_001329588 INIP 1 2.15 0.18 10 4.33 75.26 34 6.16 Yes 45 -2.22 No 0 0 No -33 0.86 Yes 37 91.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 115463204 - NM_001329588 INIP 1 1.29 0.1 7 8.41 92.85 27 5.39 No 67 0.85 Yes 0 0 No -26 0.35 No 44 48.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 115473292 - NM_001329588 INIP 1 6.65 0.6 32 11.38 87.71 29 7.75 Yes 16 1.59 Yes 0 0 No -28 0.93 Yes 42 95.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115479759 - NM_001329588 INIP 1 0.18 0.19 13 3.95 74.15 25 3.95 No 53 0.91 Yes 0 0 No -28 0.57 No 42 43.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41276548 - NM_017553 INO80 1 4.48 1.99 58 2.02 73.9 93 9.72 Yes 24 1.49 Yes 0 0 No -36 0.91 Yes 34 97.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41297703 - NM_017553 INO80 1 0.82 0.39 21 7.34 87.86 27 5.74 Yes 14 0.82 Yes 0 0 No -26 0.71 Yes 43 80.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41337245 - NM_017553 INO80 1 2.16 1.29 43 5.96 72.82 24 5.48 No 11 0.01 No 0 0 No -23 0.8 Yes 47 82.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41350977 - NM_017553 INO80 1 0.65 0.42 25 -0.07 70.15 45 5.1 No 15 1.21 Yes 0 0 No -27 0.8 Yes 26 44.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41370849 - NM_017553 INO80 1 0.36 0.28 18 9.96 97.56 15 5.83 Yes 2 0.76 No 0 0 No -27 0.85 Yes 43 58.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41379875 - NM_017553 INO80 1 0.19 0.15 11 3.6 0 9 3.87 No 14 0.2 No 0 0 No -26 0.88 Yes 44 71.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41386036 - NM_017553 INO80 1 0.41 0.25 15 1.78 0 46 8.36 Yes 33 1.61 Yes 0 0 No -37 0.66 No 33 74.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41386598 - NM_017553 INO80 1 0.37 0.22 15 3.57 87.89 27 4.76 No 18 0.22 No 0 0 No -23 0.92 Yes 47 86.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74682517 + NM_031288 INO80B 1 5.26 3.57 65 2.63 74.41 46 6.31 Yes 33 -0.85 No 26 0.49 Yes -41 0.69 Yes 29 80.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 74682928 + NM_031288 INO80B 1 1.09 1.08 49 -3.18 0 15 5.74 Yes 73 -4.67 No 26 0.43 Yes -26 0.24 No 56 68.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 74683881 + NM_031288 INO80B 1 0.67 0.61 30 5.98 76.18 19 5.01 No 34 0.33 No 0 0 No -26 0.69 Yes 44 57.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 74684432 + NM_031288 INO80B 1 0.36 0.33 22 10.53 87.45 80 8.78 Yes 67 0.92 Yes 30 0.84 Yes -31 0.66 No 39 54.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 74684436 + NM_031288 INO80B 1 0.1 0.11 7 2.57 0 84 8.99 Yes 71 0.92 Yes 30 0.84 Yes -35 0.58 No 48 69.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr18 33052575 - NM_001098817 INO80C 1 0.2 0.21 12 6.08 77.64 22 5.25 No 9 0.62 No 0 0 No -21 0.88 Yes 49 86.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 33057808 - NM_001098817 INO80C 1 0.1 0.15 11 5.57 79.98 39 4.64 No 45 0.6 No 0 0 No -38 0.41 No 35 44.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 206870450 - NM_017759 INO80D 1 0.6 0.21 13 5.21 74.23 24 5.15 No 35 -3.28 No 0 0 No -28 0.52 No 47 50.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 206927679 - NM_017759 INO80D 1 17.48 6.11 72 3.8 76.11 26 5.06 No 7 0.75 No 25 0.92 Yes -25 0.86 Yes 45 86.55 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 206927679 - NM_017759 INO80D 1 0.33 0.1 7 3.8 76.11 26 5.06 No 7 0.75 No 25 0.92 Yes -25 0.86 Yes 45 86.55 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 206928409 - NM_017759 INO80D 1 2.06 0.33 21 4.06 0 34 6.09 Yes 21 1.51 Yes 29 0.88 Yes -29 0.85 Yes 41 92.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30009102 + NR_134855 INO80E 1 0.13 0.26 14 1.3 67.58 28 6.78 Yes 35 0.43 No 0 0 No -27 0.93 Yes 43 85.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30010590 + NR_134855 INO80E 1 0.11 0.22 14 13.04 85.18 25 6.23 Yes 12 1.47 Yes 24 0.91 Yes -24 0.94 Yes 46 95.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30012314 + NR_134855 INO80E 1 1.19 1.5 50 11.1 86.94 26 5.66 Yes 76 2.16 Yes 0 0 No -25 0.72 Yes 45 85.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30012532 + NR_134855 INO80E 1 12.83 15.01 72 11.66 83.87 32 6.16 Yes 19 0.23 No 31 0.78 Yes -31 0.82 Yes 39 83.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30012785 + NR_134855 INO80E 1 0.64 0.76 28 7.65 78.5 18 7.74 Yes 5 0.3 No 28 0.43 Yes -34 0.61 No 53 73.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 191226688 + NM_001128928 INPP1 1 0.49 0.28 16 5.54 91.34 23 5.36 No 70 0.04 No 0 0 No -22 0.86 Yes 48 88.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191226838 + NM_001128928 INPP1 1 0.14 0.11 8 7.35 76.02 34 9 Yes 69 1.1 Yes 0 0 No -36 0.32 No 34 68.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191229838 + NM_001128928 INPP1 1 3.27 2.53 57 6.74 89.08 21 6.67 Yes 8 1.35 Yes 20 0.7 Yes -24 0.54 No 46 68.96 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 191231573 + NM_001128928 INPP1 1 0.44 0.28 13 6.5 81.52 22 5.36 No 9 0.58 No 0 0 No -21 0.73 Yes 49 83.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 99084885 + NM_001566 INPP4A 1 0.54 0.14 8 9.29 91.5 26 6.44 Yes 13 1.15 Yes 0 0 No -25 0.69 Yes 45 63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 99137674 + NM_001566 INPP4A 1 1.34 1.13 44 9.68 90.8 31 6.48 Yes 61 1.06 Yes 0 0 No -28 0.64 No 42 79.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 99137839 + NM_001566 INPP4A 1 0.14 0.14 8 2.08 63.7 42 5.27 No 61 0.88 Yes 0 0 No -45 0.47 No 25 78.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 99149808 + NM_001566 INPP4A 1 0.14 0.11 7 2.08 79.75 21 4.69 No 69 1.02 Yes 26 0.81 Yes -20 0.9 Yes 50 95.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 99153550 + NM_001566 INPP4A 1 0.17 0.14 7 4.75 85.75 14 5.12 No 76 -4.67 No 0 0 No -25 0.61 No 45 60.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 99155104 + NM_001566 INPP4A 1 0.67 0.47 25 6.79 85.49 33 8 Yes 20 0.36 No 0 0 No -35 0.57 No 38 77.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 99163006 + NM_001566 INPP4A 1 1.05 1.07 44 7.45 86.06 20 4.9 No 74 -4.51 No 26 0.84 Yes -17 0.75 Yes 53 78.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 99170710 + NM_001566 INPP4A 1 0.22 0.13 7 1.12 72.9 24 5.48 No 51 0.55 No 28 0.93 Yes -23 0.53 No 47 24.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 99172018 + NM_001566 INPP4A 1 0.21 0.18 11 -16.54 60.66 32 6.56 Yes 19 1.34 Yes 0 0 No -31 0.74 Yes 39 65.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 99185620 + NM_001566 INPP4A 1 0.24 0.18 10 9.29 80.84 28 5.56 Yes 9 1.13 Yes 27 0.91 Yes -27 0.71 Yes 43 86.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 99186045 + NM_001566 INPP4A 1 0.16 0.11 7 5.44 80.55 29 4.26 No 66 0.34 No 28 0.74 Yes -28 0.44 No 49 52.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 99188347 + NM_001566 INPP4A 1 1.02 0.75 38 8.5 76.49 27 5.74 Yes 23 1.59 Yes 38 0.27 Yes -26 0.84 Yes 44 91.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 134465681 + NM_005539 INPP5A 1 0.84 0.46 22 4.62 81.46 52 6.55 Yes 39 1.83 Yes 0 0 No -27 0.43 No 43 40.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 134472127 + NM_005539 INPP5A 1 0.37 0.21 12 6.08 87.65 27 6.32 Yes 14 0.94 Yes 0 0 No -26 0.95 Yes 44 89.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 134488730 + NM_005539 INPP5A 1 0.84 0.44 22 11.37 89.18 26 5.48 No 13 1.72 Yes 0 0 No -25 0.94 Yes 45 95.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 134518696 + NM_005539 INPP5A 1 3.77 1.9 56 10.69 91.79 18 5.98 Yes 5 1.77 Yes 0 0 No -29 0.66 No 41 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 134521933 + NM_005539 INPP5A 1 0.63 0.32 18 6.19 76.86 32 8.69 Yes 19 1.67 Yes 0 0 No -32 0.52 No 39 65.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 134543043 + NM_005539 INPP5A 1 0.79 0.28 15 4.01 78.04 24 5.48 No 11 0.06 No 0 0 No -23 0.92 Yes 47 91.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 134543975 + NM_005539 INPP5A 1 0.52 0.19 12 9.18 86.86 29 6.03 Yes 3 1.87 Yes 0 0 No -28 0.93 Yes 42 93.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 134567276 + NM_005539 INPP5A 1 3.26 0.81 37 7.96 87.43 28 6.63 Yes 15 0.76 No 27 0.62 Yes -31 0.75 Yes 39 83.57 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 134567747 + NM_005539 INPP5A 1 3.39 0.79 31 9.23 81.75 32 7.42 Yes 19 -0.25 No 0 0 No -31 0.86 Yes 39 93.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 134570906 + NM_005539 INPP5A 1 0.74 0.17 9 10.23 83.59 23 5.77 Yes 10 0.15 No 0 0 No -22 0.87 Yes 48 90.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 134572535 + NM_005539 INPP5A 1 0.47 0.1 7 8.27 82.95 25 5.57 Yes 6 0.75 No 0 0 No -24 0.55 No 46 77.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 38331596 - NM_005540 INPP5B 1 0.25 0.32 20 3.3 66.7 12 7.55 Yes -1 0.96 Yes 28 0.62 Yes -11 0.47 No 59 65.33 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 38335573 - NM_005540 INPP5B 1 1.31 1.31 44 8.31 91.4 22 6.32 Yes 9 0.72 No 0 0 No -21 0.59 No 43 44.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 38335687 - NM_005540 INPP5B 1 0.5 0.6 28 5.42 72.94 40 7.38 Yes 27 0.94 Yes 43 0.47 Yes -34 0.45 No 36 58.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 38339732 - NM_005540 INPP5B 1 0.29 0.32 20 -1.41 60.79 39 6.16 Yes 26 0.3 No 0 0 No -34 0.69 Yes 36 47.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 38339816 - NM_005540 INPP5B 1 1.07 1.17 49 7.97 0 15 4.58 No 23 0.28 No 0 0 No -20 0.57 No 35 91.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 38342708 - NM_005540 INPP5B 1 0.21 0.13 8 7.63 86.67 30 5.72 Yes 54 0.84 Yes 0 0 No -29 0.72 Yes 41 59.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 38344165 - NM_005540 INPP5B 1 5.07 3.75 70 3.44 77.28 27 5.36 No 39 1.28 Yes 26 0.83 Yes -26 0.82 Yes 44 88.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 38344243 - NM_005540 INPP5B 1 0.24 0.15 10 7 82.09 42 6.06 Yes 29 0.9 Yes 0 0 No -21 0.61 No 29 56.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 38349405 - NM_005540 INPP5B 1 1.19 0.89 35 8.37 98.88 24 5.29 No 73 1.46 Yes 0 0 No -23 0.89 Yes 47 94.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38349540 - NM_005540 INPP5B 1 0.54 0.38 21 1.26 80.82 25 6.45 Yes 12 0.61 No 0 0 No -24 0.84 Yes 46 68.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 38352331 - NM_005540 INPP5B 1 0.83 0.6 28 4.25 69.51 38 6.05 Yes 25 0.61 No 0 0 No -37 0.43 No 33 49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 38355341 - NM_005540 INPP5B 1 0.72 0.92 41 5.09 78.67 28 6.99 Yes 15 1.47 Yes 0 0 No -27 0.81 Yes 43 91.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38355393 - NM_005540 INPP5B 1 1.8 2.4 64 5.24 0 40 8.26 Yes 49 0.46 No 0 0 No -33 0.48 No 37 64.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 38356354 - NM_005540 INPP5B 1 0.77 0.97 41 12.08 89.53 24 5.68 Yes 6 0.79 Yes 0 0 No -23 0.67 Yes 52 71.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38406465 - NM_005540 INPP5B 1 3.15 1.03 40 -0.77 0 10 3.87 No 75 1.54 Yes 0 0 No -28 0.86 Yes 42 93.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38407934 - NM_005540 INPP5B 1 1.29 0.42 20 4.08 87 25 7.48 Yes 12 1.33 Yes 0 0 No -24 0.93 Yes 46 94.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38407937 - NM_005540 INPP5B 1 2.12 0.68 28 8.17 84.2 22 7.28 Yes 9 1.36 Yes 21 0.84 Yes -21 0.92 Yes 49 94.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 233927785 + NM_001017915 INPP5D 1 0.41 0.82 41 11.9 90.54 22 5.25 No 9 0.27 No 0 0 No -27 0.44 No 43 65.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 233940688 + NM_001017915 INPP5D 1 0.06 0.14 8 9.03 91.75 26 5.1 No 26 1.42 Yes 0 0 No -25 0.8 Yes 45 80.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 233952548 + NM_001017915 INPP5D 1 1.18 2.65 64 9.82 93.09 27 4.94 No 38 0.32 No 0 0 No -26 0.52 No 44 50.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 233990457 + NM_001017915 INPP5D 1 75.69 110.44 72 7.06 78.85 33 6.89 Yes 20 1.25 Yes 29 0.9 Yes -32 0.93 Yes 38 96.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 234068887 + NM_001017915 INPP5D 1 0.22 0.54 27 10.33 96.9 28 3.98 No 75 0.72 No 0 0 No -23 0.65 No 47 85.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 234069304 + NM_001017915 INPP5D 1 0.13 0.28 13 3.99 0 67 9.21 Yes 54 1.65 Yes 0 0 No -44 0.31 No 34 14.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 234070372 + NM_001017915 INPP5D 1 0.04 0.1 7 1.97 72.82 29 5.92 Yes 16 1.24 Yes 0 0 No -28 0.91 Yes 42 89.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234070588 + NM_001017915 INPP5D 1 0.12 0.24 13 11.21 88.64 34 6.63 Yes 75 1.34 Yes 0 0 No -33 0.67 Yes 42 68.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 234072399 + NM_001017915 INPP5D 1 2.71 4.81 70 7.09 82.69 22 5.74 Yes 32 1.59 Yes 0 0 No -21 0.79 Yes 49 86.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234072405 + NM_001017915 INPP5D 1 0.11 0.19 12 -3.35 0 9 3.22 No 38 1.57 Yes 0 0 No -27 0.82 Yes 43 87.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234079020 + NM_001017915 INPP5D 1 0.19 0.58 32 1.88 73.41 44 7.23 Yes 14 1.56 Yes 0 0 No -26 0.96 Yes 44 94.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234106755 + NM_001017915 INPP5D 1 0.05 0.13 9 4.51 78.75 23 3.94 No 23 1.28 Yes 0 0 No -35 0.7 Yes 35 79.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234113080 + NM_001017915 INPP5D 1 0.13 0.28 14 1.43 0 27 6.39 Yes 6 1.19 Yes 0 0 No -26 0.94 Yes 44 90.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139324213 - NM_001318502 INPP5E 1 2.95 0.83 35 0.61 75.2 22 4.9 No 56 2.23 Yes 0 0 No -21 0.83 Yes 49 75.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139325547 - NM_001318502 INPP5E 1 2.27 0.4 22 -0.39 0 13 4.22 No 40 0.48 No 0 0 No -42 0.54 No 58 22.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139327630 - NM_001318502 INPP5E 1 5.48 0.67 32 11.12 90.72 35 8.98 Yes -4 -0.43 No 0 0 No -20 0.74 Yes 50 82.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139328629 - NM_001318502 INPP5E 1 0.72 0.15 10 0.65 0 19 4.35 No 60 0.72 No 22 0.79 Yes -18 0.84 Yes 52 37.97 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 1416849 - NM_001135642 INPP5K 1 6.48 3.25 70 0.36 0 10 4 No 60 -5.4 No 24 0.52 Yes -22 0.87 Yes 48 83.9 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71936493 + NM_001567 INPPL1 1 0.79 0.36 20 5.94 80.43 28 6.59 Yes 69 -5.76 No 0 0 No -27 0.78 Yes 43 66.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 71939424 + NM_001567 INPPL1 1 0.42 0.39 20 8.27 80.46 19 5.73 Yes 51 2.33 Yes 0 0 No -26 0.56 No 44 36.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 71939497 + NM_001567 INPPL1 1 0.84 0.71 37 9.75 82.7 37 6.31 Yes 51 -1.92 No 21 0.27 Yes -36 0.55 No 34 76.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 71939690 + NM_001567 INPPL1 1 0.91 0.67 32 3.11 75.62 56 8.65 Yes 43 1.9 Yes 0 0 No -18 0.45 No 52 39.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 71939701 + NM_001567 INPPL1 1 0.26 0.21 13 1.39 0 19 4.45 No 54 1.9 Yes 0 0 No -18 0.54 No 41 65.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 71940051 + NM_001567 INPPL1 1 2.83 2.32 64 9.08 84.16 31 5.22 No 13 1.2 Yes 0 0 No -25 0.63 No 45 72.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 71940067 + NM_001567 INPPL1 1 3.24 2.71 63 6.52 84.17 21 5 No 29 1.2 Yes 0 0 No -22 0.55 No 50 52.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 71941141 + NM_001567 INPPL1 1 0.1 0.1 7 -3.67 0 19 3.98 No 21 0.72 No 25 0.93 Yes -33 0.64 No 37 65.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 71941144 + NM_001567 INPPL1 1 0.94 1.01 42 0.07 77.25 22 4.29 No 24 0.74 No 25 0.93 Yes -24 0.3 No 34 56.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 71941842 + NM_001567 INPPL1 1 0.43 0.42 25 0.68 73.67 24 5.48 No 11 1.06 Yes 0 0 No -23 0.91 Yes 47 91.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71943672 + NM_001567 INPPL1 1 0.23 0.21 14 -9.34 74.28 96 9.29 Yes 48 1.96 Yes 0 0 No -47 0.52 No 23 85.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 71946940 + NM_001567 INPPL1 1 1.15 0.83 37 9.11 87.42 27 5.39 No 76 0.54 No 0 0 No -26 0.95 Yes 44 93.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 155093930 + NM_001346591 INSIG1 1 0.03 0.1 7 -10.51 0 12 3.82 No 29 1 Yes 32 0.66 Yes -41 0.76 Yes 29 81.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 155094438 + NM_001346591 INSIG1 1 0.11 0.86 25 -5.66 0 16 3.87 No -4 0.12 No 26 0.89 Yes -15 0.57 No 47 31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 155094515 + NM_001346591 INSIG1 1 0.08 0.43 23 7.22 95.21 48 6.93 Yes 73 0.64 No 0 0 No -34 0.74 Yes 36 77.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 155095516 + NM_001346591 INSIG1 1 0.18 0.18 9 4.54 80.39 32 4.19 No 6 0.95 Yes 24 0.82 Yes -26 0.73 Yes 39 85.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 155099005 + NM_001346591 INSIG1 1 1.04 0.86 39 9.15 82.26 26 5.07 No 2 1.17 Yes 0 0 No -25 0.96 Yes 45 96.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 155099721 + NM_001346591 INSIG1 1 0.09 0.1 7 8.91 93 28 4.95 No -3 0.27 No 0 0 No -27 0.45 No 43 64.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 155099005 + NM_001346591 INSIG1 1 0.43 0.43 21 9.15 82.26 26 5.07 No 2 1.17 Yes 0 0 No -25 0.96 Yes 45 96.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 118860099 + NM_001321329 INSIG2 1 0.3 0.18 9 8.3 87.52 43 6.51 Yes 43 0.43 No 22 0.36 Yes -31 0.78 Yes 39 78.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 7128963 - NM_001079817 INSR 1 6.77 2.93 67 4.47 81.91 37 9.16 Yes 50 0.41 No 0 0 No -30 0.28 No 36 36.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 7150544 - NM_001079817 INSR 1 0.98 0.32 17 9.85 92.32 26 5.47 No 33 1.18 Yes 25 0.93 Yes -25 0.93 Yes 45 92.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 7159657 - NM_001079817 INSR 1 0.97 0.4 22 5.76 86.58 34 7.15 Yes 7 1.76 Yes 0 0 No -29 0.87 Yes 41 70.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7169843 - NM_001079817 INSR 1 1.34 0.76 40 2.47 68.71 56 6.38 Yes 74 1.29 Yes 0 0 No -31 0.81 Yes 39 81.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7203672 - NM_001079817 INSR 1 0.21 0.14 7 11.11 74.89 36 6.48 Yes 31 -0.64 No 0 0 No -35 0.78 Yes 35 80.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 1510348 - NM_001080453 INTS1 1 0.57 0.53 27 -0.51 0 9 4.58 No -4 0.62 No 25 0.17 Yes -32 0.16 No 62 24.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 1512042 - NM_001080453 INTS1 1 0.18 0.15 11 9.13 79.95 37 6.56 Yes 24 0.6 No 21 0.69 Yes -28 0.56 No 34 88.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 1512858 - NM_001080453 INTS1 1 0.16 0.14 8 6.79 84.47 22 4.9 No 9 2.49 Yes 20 0.76 Yes -21 0.87 Yes 49 92.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 1516089 - NM_001080453 INTS1 1 0.73 0.38 23 -7.58 60.21 23 5 No 10 0.02 No 0 0 No -22 0.93 Yes 48 63.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 1517477 - NM_001080453 INTS1 1 0.37 0.24 15 7.95 82.55 47 7.81 Yes 34 2.03 Yes 0 0 No -46 0.44 No 24 75.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 1519174 - NM_001080453 INTS1 1 0.17 0.15 8 9.28 87.61 19 6.24 Yes 6 -0.96 No 0 0 No -18 0.81 Yes 52 81.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 1521081 - NM_001080453 INTS1 1 0.12 0.1 7 4.34 82.62 16 5.09 No 34 -0.49 No 0 0 No -23 0.8 Yes 50 76.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 1521117 - NM_001080453 INTS1 1 0.69 0.53 27 2.28 0 11 4.12 No -2 0.35 No 0 0 No -25 0.54 No 41 39.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 1523076 - NM_001080453 INTS1 1 0.13 0.13 8 3.3 72.79 10 4.69 No -3 1.43 Yes 0 0 No -23 0.56 No 47 74.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 1527045 - NM_001080453 INTS1 1 0.45 0.35 20 0.46 63.16 16 5.92 Yes 56 1.84 Yes 0 0 No -28 0.5 No 55 66.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 1533523 - NM_001080453 INTS1 1 0.51 0.46 24 2.71 76.28 35 5.83 Yes 33 0.65 No 23 0.23 Yes -27 0.7 Yes 43 44.47 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 1534257 - NM_001080453 INTS1 1 0.17 0.17 10 -0.23 0 14 4.47 No 70 0.47 No 26 0.23 Yes -45 0.34 No 27 44.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 1534268 - NM_001080453 INTS1 1 1.19 1.04 45 4.7 75.32 72 8.68 Yes 59 0.48 No 26 0.23 Yes -23 0.5 No 38 51.11 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 1536930 - NM_001080453 INTS1 1 0.11 0.15 9 7.53 82.84 24 5.16 No 60 -0.79 No 0 0 No -43 0.49 No 27 51.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 1539647 - NM_001080453 INTS1 1 0.1 0.1 7 -0.48 0 20 4.47 No 76 0.73 No 0 0 No -31 0.86 Yes 39 87.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 1540914 - NM_001080453 INTS1 1 0.82 0.92 37 1.92 0 37 4.74 No 35 0.56 No 0 0 No -36 0.33 No 34 55.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 1542813 - NM_001080453 INTS1 1 0.21 0.15 9 5.03 83.07 19 4.81 No 63 0.23 No 0 0 No -50 0.68 Yes 20 65.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 1543310 - NM_001080453 INTS1 1 0.25 0.19 11 7.59 89.85 13 6.86 Yes 0 1.27 Yes 0 0 No -29 0.6 No 49 61.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 19675704 + NM_018142 INTS10 1 1.07 0.63 30 9.82 90.72 26 4.99 No 7 0.74 No 25 0.92 Yes -25 0.81 Yes 45 83.22 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 19682316 + NM_018142 INTS10 1 0.33 0.36 15 2.98 77.42 29 4.34 No 38 0.94 Yes 30 0.21 Yes -22 0.78 Yes 48 47.84 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 19687913 + NM_018142 INTS10 1 4.7 5.74 71 4 72.03 25 7.66 Yes 12 1.22 Yes 27 0.88 Yes -24 0.59 No 46 64.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 19690549 + NM_018142 INTS10 1 0.12 0.14 7 11.45 88.58 33 6.87 Yes 20 0.72 No 0 0 No -27 0.54 No 43 84.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 19699337 + NM_018142 INTS10 1 0.31 0.38 18 8.84 97.46 16 4.69 No 56 0.38 No 23 0.67 Yes -23 0.77 Yes 47 67.95 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 19699380 + NM_018142 INTS10 1 0.25 0.26 15 -0.1 0 31 5.25 No 46 0.33 No 0 0 No -30 0.88 Yes 40 86.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 19701591 + NM_018142 INTS10 1 0.15 0.13 9 2.31 0 48 7.91 Yes 35 1.53 Yes 0 0 No -47 0.73 Yes 23 85.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 19703092 + NM_018142 INTS10 1 0.25 0.19 12 -12.15 0 32 5.26 No 20 0.41 No 0 0 No -32 0.46 No 61 37.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 19704802 + NM_018142 INTS10 1 0.96 0.83 40 4.13 85.15 31 6.08 Yes 72 -2.78 No 0 0 No -33 0.67 Yes 40 43.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 19704904 + NM_018142 INTS10 1 0.79 0.85 35 4.29 77.99 29 6.4 Yes 55 0.13 No 0 0 No -28 0.68 Yes 42 61.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 19705700 + NM_018142 INTS10 1 0.11 0.13 8 1.5 55.76 40 5.05 No 18 0.89 Yes 0 0 No -39 0.63 No 31 74.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 19706672 + NM_018142 INTS10 1 1.97 1.88 62 9.01 84.95 28 7.21 Yes 15 0.32 No 27 0.65 Yes -27 0.78 Yes 43 69.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 19709152 + NM_018142 INTS10 1 0.15 0.14 9 3.57 0 33 7.42 Yes 20 2.67 Yes 39 0.74 Yes -32 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 1247458 - NM_001256456 INTS11 1 0.17 0.21 12 8.19 89.41 25 4.9 No 75 1.43 Yes 0 0 No -24 0.95 Yes 46 92.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1248478 - NM_001256456 INTS11 1 0.26 0.4 23 4.54 82.35 25 5.74 Yes 35 0.67 No 0 0 No -24 0.79 Yes 49 66.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 1249486 - NM_001256456 INTS11 1 0.69 0.88 35 7.43 79.01 27 5.63 Yes 24 1.08 Yes 26 0.84 Yes -26 0.9 Yes 44 78.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1250000 - NM_001256456 INTS11 1 0.18 0.18 11 10.5 85.64 29 5.57 Yes 30 0.25 No 0 0 No -28 0.73 Yes 42 84.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1250299 - NM_001256456 INTS11 1 0.12 0.22 10 4.18 83.18 31 5.83 Yes 55 1.47 Yes 0 0 No -30 0.94 Yes 40 88.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1250458 - NM_001256456 INTS11 1 0.09 0.14 10 4.14 85.4 20 4.8 No 7 -0.37 No 0 0 No -19 0.69 Yes 51 75.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1254814 - NM_001256456 INTS11 1 2.53 4.26 71 4.44 83.65 16 7.25 Yes 3 0.85 Yes 24 0.72 Yes -18 0.67 Yes 52 62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 1254814 - NM_001256456 INTS11 1 0.07 0.11 8 4.44 83.65 16 7.25 Yes 3 0.85 Yes 24 0.72 Yes -18 0.67 Yes 52 62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 1255086 - NM_001256456 INTS11 1 0.26 0.44 27 5.65 77.37 42 6.88 Yes 29 1.08 Yes 29 0.8 Yes -29 0.62 No 41 62.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 1255877 - NM_001256456 INTS11 1 0.23 0.36 19 5.28 77.08 21 6.46 Yes 8 1.95 Yes 0 0 No -20 0.56 No 50 77.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 1256063 - NM_001256456 INTS11 1 0.07 0.11 7 1.1 67.41 30 6.89 Yes 17 1.67 Yes 29 0.89 Yes -29 0.88 Yes 41 63.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 106610438 - NM_020395 INTS12 1 0.67 0.65 32 10.51 85.42 24 6.13 Yes 11 1.13 Yes 0 0 No -23 0.67 Yes 47 75.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 106610893 - NM_020395 INTS12 1 0.18 0.15 10 8.82 86.87 23 5.83 Yes 10 1.23 Yes 0 0 No -22 0.86 Yes 48 84.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 106613208 - NM_020395 INTS12 1 0.12 0.13 8 5.18 75.72 20 4.35 No 20 0.81 Yes 0 0 No -25 0.53 No 47 38.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 27066935 - NM_018164 INTS13 1 0.31 0.54 27 9.13 82.51 22 6.16 Yes 9 0.82 Yes 0 0 No -21 0.54 No 49 57.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 27066935 - NM_018164 INTS13 1 0.07 0.13 8 9.13 82.51 22 6.16 Yes 9 0.82 Yes 0 0 No -21 0.54 No 49 57.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 27067466 - NM_018164 INTS13 1 1.84 3.13 63 5.61 79.51 14 5.1 No 1 1.54 Yes 24 0.59 Yes -13 0.22 No 57 45.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 27067466 - NM_018164 INTS13 1 0.34 0.54 30 5.61 79.51 14 5.1 No 1 1.54 Yes 24 0.59 Yes -13 0.22 No 57 45.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 27070354 - NM_018164 INTS13 1 0.1 0.21 10 -3.13 72.55 18 5.45 No 63 0.16 No 0 0 No -23 0.59 No 24 49.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27070393 - NM_018164 INTS13 1 1.9 4 71 6.86 82.12 62 7.99 Yes 53 0.54 No 25 0.8 Yes -36 0.86 Yes 34 84.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 27070652 - NM_018164 INTS13 1 0.15 0.24 14 4.33 77.92 13 4.21 No 17 1.57 Yes 0 0 No -18 0.27 No 32 29.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 27071339 - NM_018164 INTS13 1 0.23 0.35 20 5.54 87.05 22 3.87 No 32 0.17 No 0 0 No -31 0.79 Yes 39 61.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 27081213 - NM_018164 INTS13 1 0.13 0.15 10 -2.96 0 16 3.87 No 38 0.51 No 0 0 No -35 0.43 No 35 50.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27089096 - NM_018164 INTS13 1 0.13 0.18 9 11.25 87.33 35 5.92 Yes 22 1.55 Yes 0 0 No -34 0.71 Yes 36 77.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65874354 - NR_045105 INTS14 1 0.09 0.14 7 1.77 0 35 7.07 Yes 22 1.44 Yes 0 0 No -34 0.88 Yes 36 91.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65876910 - NR_045105 INTS14 1 0.12 0.17 11 4.5 67.68 19 4.85 No 72 1.7 Yes 0 0 No -27 0.77 Yes 43 72.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65877171 - NR_045105 INTS14 1 0.22 0.29 19 7.59 85.09 21 4.98 No 8 0.23 No 0 0 No -24 0.54 No 46 61.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 65885908 - NR_045105 INTS14 1 3.36 3.86 71 4.14 85.84 28 6.05 Yes 15 2.41 Yes 24 0.96 Yes -27 0.86 Yes 43 90.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 65889933 - NR_045105 INTS14 1 0.19 0.26 16 3 76.38 20 4.69 No 7 0.62 No 0 0 No -19 0.92 Yes 51 91.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 65890919 - NR_045105 INTS14 1 0.14 0.18 10 10.82 90.97 22 5.29 No 57 1.01 Yes 0 0 No -21 0.59 No 49 60.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65895329 - NR_045105 INTS14 1 0.24 0.36 20 8.42 85.24 27 6.24 Yes 14 0.25 No 0 0 No -26 0.92 Yes 44 93.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 65897571 - NR_045105 INTS14 1 1.06 1.28 51 -6.65 0 34 6.08 Yes 21 0.8 Yes 29 0.87 Yes -33 0.81 Yes 37 67.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 59953528 - NR_026641 INTS2 1 0.26 0.21 13 10.9 87.72 38 4.78 No 76 1.01 Yes 0 0 No -29 0.56 No 41 68.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59955441 - NR_026641 INTS2 1 0.13 0.1 7 3.05 0 12 4.24 No 11 1.14 Yes 0 0 No -30 0.51 No 40 59.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59962024 - NR_026641 INTS2 1 0.47 0.24 14 10.52 90.85 20 5.1 No 46 0.5 No 0 0 No -25 0.72 Yes 45 70.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59965410 - NR_026641 INTS2 1 1.19 0.79 39 1.28 83.95 25 6.24 Yes 32 2.12 Yes 0 0 No -24 0.8 Yes 46 87.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59987950 - NR_026641 INTS2 1 0.25 0.21 13 3.97 84.41 23 5.84 Yes 29 0.46 No 0 0 No -22 0.38 No 48 64.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59989956 - NR_026641 INTS2 1 1.19 0.67 34 9.3 94.21 29 5.39 No 25 0.38 No 0 0 No -28 0.67 Yes 42 57.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59998704 - NR_026641 INTS2 1 0.3 0.22 13 6.63 87.15 26 5 No 59 0.68 No 0 0 No -25 0.37 No 45 44.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 60002935 - NR_026641 INTS2 1 1.03 0.56 24 10.28 87.15 29 4.18 No 44 0.29 No 0 0 No -32 0.67 Yes 42 69.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 153703417 + NM_023015 INTS3 1 1.41 1.82 62 12.45 80.51 31 6.33 Yes 18 1.11 Yes 0 0 No -30 0.97 Yes 40 97.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153711393 + NM_023015 INTS3 1 0.12 0.17 11 3.28 0 37 5.86 Yes 54 1.43 Yes 0 0 No -30 0.57 No 40 73.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 153726176 + NM_023015 INTS3 1 0.06 0.1 7 7.74 88.21 27 5.2 No 48 0.79 Yes 26 0.85 Yes -26 0.78 Yes 44 56.34 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 153726176 + NM_023015 INTS3 1 0.1 0.22 14 7.74 88.21 27 5.2 No 48 0.79 Yes 26 0.85 Yes -26 0.78 Yes 44 56.34 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 153733470 + NM_023015 INTS3 1 0.16 0.19 11 3.83 64.22 31 5.48 No 18 -2.86 No 24 0.57 Yes -24 0.6 No 46 60.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 153733495 + NM_023015 INTS3 1 2.82 3.42 68 11.99 95.32 30 5.83 Yes 43 -2.54 No 24 0.57 Yes -27 0.59 No 46 73.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 153736597 + NM_023015 INTS3 1 0.45 0.9 38 -4.89 0 33 6.56 Yes 20 1.66 Yes 0 0 No -32 0.92 Yes 38 89.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153736641 + NM_023015 INTS3 1 0.2 0.38 19 10.03 91.93 19 5.71 Yes 64 1.63 Yes 0 0 No -29 0.68 Yes 41 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 153737469 + NM_023015 INTS3 1 0.14 0.29 17 8.44 81.63 25 5.1 No 74 0.7 No 0 0 No -25 0.6 No 48 50.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 153740154 + NM_023015 INTS3 1 0.13 0.21 13 -5.84 0 26 5.1 No 73 -6.79 No 0 0 No -25 0.9 Yes 45 71.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 153740195 + NM_023015 INTS3 1 0.42 0.6 31 0.2 0 15 4.33 No 67 -4.35 No 0 0 No -17 0.44 No 53 33.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 153742163 + NM_023015 INTS3 1 0.1 0.15 10 -1.27 77.24 23 9.09 Yes 10 1.51 Yes 0 0 No -22 0.52 No 38 84.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 153742207 + NM_023015 INTS3 1 0.25 0.38 21 7.36 84.37 26 5.19 No 54 1.49 Yes 32 0.93 Yes -20 0.5 No 50 79.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 153745672 + NM_023015 INTS3 1 0.09 0.13 7 -2.35 0 35 7.07 Yes 22 1.66 Yes 0 0 No -34 0.8 Yes 36 82.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77590172 - NM_033547 INTS4 1 1.17 0.68 34 -0.23 86.77 32 5.75 Yes 58 1.21 Yes 0 0 No -29 0.59 No 39 64.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 77592602 - NM_033547 INTS4 1 0.58 0.33 19 11.23 94.18 24 5.48 No 52 0.15 No 0 0 No -23 0.77 Yes 47 59.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 77602856 - NM_033547 INTS4 1 0.31 0.21 11 9.09 87.39 18 6.24 Yes 5 1.48 Yes 0 0 No -24 0.93 Yes 46 96.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77602856 - NM_033547 INTS4 1 1.14 0.78 40 9.09 87.39 18 6.24 Yes 5 1.48 Yes 0 0 No -24 0.93 Yes 46 96.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77622199 - NM_033547 INTS4 1 4.34 2.51 60 8.89 84.38 24 5.74 Yes 34 1.04 Yes 0 0 No -23 0.62 No 47 63.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 77629311 - NM_033547 INTS4 1 1.69 0.99 44 8.95 88.27 25 7.48 Yes 12 1.38 Yes 24 0.95 Yes -24 0.93 Yes 46 95.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77635714 - NM_033547 INTS4 1 13.8 3.74 66 9.96 81.08 22 7.55 Yes 9 1.96 Yes 0 0 No -27 0.34 No 49 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 77637689 - NM_033547 INTS4 1 0.76 0.67 32 6.18 85.4 27 7.28 Yes 14 1.13 Yes 0 0 No -26 0.84 Yes 44 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77671432 - NM_033547 INTS4 1 0.11 0.11 7 1.49 0 16 3.7 No 3 -2.03 No 0 0 No -28 0.78 Yes 42 77.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 77680807 - NM_033547 INTS4 1 0.15 0.1 7 11.94 100 29 5.83 Yes 23 0.08 No 0 0 No -27 0.77 Yes 43 67.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 77690147 - NM_033547 INTS4 1 0.12 0.13 7 -3.58 72.43 24 5.91 Yes 62 -1.18 No 27 0.61 Yes -29 0.79 Yes 41 68.62 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 77690519 - NM_033547 INTS4 1 0.45 0.44 24 12.58 90.59 33 5.83 Yes 20 0.73 No 0 0 No -32 0.8 Yes 38 87.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 77698745 - NM_033547 INTS4 1 9.31 5.96 71 8.21 87.11 28 7.68 Yes 15 1.47 Yes 27 0.88 Yes -27 0.94 Yes 43 95.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77702340 - NM_033547 INTS4 1 0.18 0.13 8 1.06 0 14 2.59 No 72 0.26 No 0 0 No -42 0.48 No 28 54.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 77703676 - NM_033547 INTS4 1 0.67 0.46 23 8.95 85.01 22 5.83 Yes 63 1.71 Yes 0 0 No -25 0.55 No 49 43.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 51943390 - NM_001306091 INTS6 1 0.14 0.26 18 4.12 74.74 43 6.85 Yes 72 0.87 Yes 0 0 No -27 0.8 Yes 43 79.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 51957853 - NM_001306091 INTS6 1 0.1 0.15 11 5.14 77.33 28 4.63 No 35 0.2 No 0 0 No -27 0.55 No 43 70.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 52023540 - NM_001306091 INTS6 1 0.15 0.22 14 8.81 88.24 29 6.29 Yes 11 0.53 No 0 0 No -28 0.51 No 42 70.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 134680697 + NM_182540 INTS6L 1 2.57 1.53 52 2.45 67.99 30 5.57 Yes 17 1.32 Yes 0 0 No -29 0.92 Yes 41 95.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 134684032 + NM_182540 INTS6L 1 0.21 0.11 8 9.48 88.72 26 7.74 Yes 13 0.77 Yes 0 0 No -26 0.66 No 45 61.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 134687431 + NM_182540 INTS6L 1 1.84 1.19 42 11.15 88.27 36 8.15 Yes 23 1.13 Yes 0 0 No -35 0.68 Yes 35 83.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 134701034 + NM_182540 INTS6L 1 1.03 0.49 25 6.92 72.3 14 5.94 Yes 1 1.98 Yes 0 0 No -30 0.37 No 41 44.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 134703474 + NM_182540 INTS6L 1 3.6 0.28 17 10.51 95.1 26 5.29 No 63 0.57 No 0 0 No -26 0.66 No 44 69.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 134704360 + NM_182540 INTS6L 1 414.21 31.68 72 9.06 84.54 28 7.11 Yes 15 1.19 Yes 0 0 No -27 0.95 Yes 43 92.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 134707411 + NM_182540 INTS6L 1 0.15 0.1 7 3.11 69.66 36 7.07 Yes 23 2.18 Yes 0 0 No -35 0.91 Yes 35 96.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 134707503 + NM_182540 INTS6L 1 1.56 0.99 42 7.74 90.52 17 6 Yes 4 1.87 Yes 0 0 No -16 0.67 Yes 54 83.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 134716165 + NM_182540 INTS6L 1 1.06 0.65 32 8.21 83.8 41 5.78 Yes 62 1.31 Yes 22 0.77 Yes -22 0.48 No 48 61.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 212117800 - NR_037667 INTS7 1 0.28 0.29 17 3.29 89.34 35 5.83 Yes 22 1.06 Yes 0 0 No -34 0.8 Yes 36 91.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 212119988 - NR_037667 INTS7 1 2.09 2.56 59 7.39 90.49 22 5.1 No 9 1.13 Yes 21 0.82 Yes -21 0.74 Yes 49 82.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 212125113 - NR_037667 INTS7 1 1.6 1.88 60 5.57 89.69 26 4.77 No 73 1.95 Yes 0 0 No -26 0.39 No 49 50.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 212130861 - NR_037667 INTS7 1 0.47 0.33 19 6.06 89.33 27 5.74 Yes 75 0.07 No 0 0 No -26 0.85 Yes 44 61.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 212130885 - NR_037667 INTS7 1 0.18 0.11 8 4.16 83 22 4.01 No 51 0.06 No 0 0 No -27 0.58 No 35 38.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 212141946 - NR_037667 INTS7 1 0.19 0.25 16 4.54 70.55 37 6.32 Yes 31 1.15 Yes 22 0.75 Yes -22 0.78 Yes 48 65.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 212150887 - NR_037667 INTS7 1 0.13 0.15 9 7.79 87.1 32 4.78 No 23 0.33 No 0 0 No -27 0.63 No 39 73.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 212161757 - NR_037667 INTS7 1 0.35 0.49 26 4.19 0 38 6.32 Yes 25 1.45 Yes 0 0 No -37 0.84 Yes 33 77.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 212180742 - NR_037667 INTS7 1 0.71 1.25 46 4.01 82.3 22 4.01 No 3 0.75 No 0 0 No -21 0.75 Yes 49 81.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95841190 + NR_073444 INTS8 1 0.22 0.26 15 -1.25 0 27 5.99 Yes 14 0.93 Yes 31 0.51 Yes -26 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 95842910 + NR_073444 INTS8 1 0.21 0.24 13 6.53 86.16 20 5.66 Yes 7 1.27 Yes 0 0 No -19 0.56 No 51 78.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 95849357 + NR_073444 INTS8 1 0.21 0.22 12 6.4 89.08 27 5.99 Yes 67 -2.77 No 0 0 No -22 0.64 No 48 84.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 95850721 + NR_073444 INTS8 1 6.2 6.4 72 7.27 75.33 24 4.51 No 44 0.3 No 23 0.87 Yes -23 0.88 Yes 47 93.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 95855505 + NR_073444 INTS8 1 0.47 0.46 24 8.67 84.18 24 6.68 Yes 11 0.71 No 0 0 No -23 0.37 No 47 63.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 95862137 + NR_073444 INTS8 1 0.07 0.1 7 1.01 0 38 9.85 Yes 25 0.51 No 22 0.82 Yes -29 0.43 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 95876822 + NR_073444 INTS8 1 0.08 0.11 7 3 77.35 21 6.4 Yes 53 0.63 No 0 0 No -20 0.82 Yes 50 87.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 28625780 - NM_001172562 INTS9 1 0.32 0.17 8 6.98 90.57 24 4.91 No 30 -2.55 No 0 0 No -23 0.56 No 47 41.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 28625843 - NM_001172562 INTS9 1 0.25 0.14 8 0.39 80.34 23 5.81 Yes 34 0.11 No 25 0.6 Yes -27 0.56 No 43 76.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 28625894 - NM_001172562 INTS9 1 0.93 0.53 23 6.64 0 16 4.58 No 54 0.35 No 28 0.6 Yes -23 0.34 No 47 55.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 28626630 - NM_001172562 INTS9 1 0.17 0.13 8 10.58 86.19 13 4.92 No 0 0.38 No 0 0 No -23 0.65 No 47 69.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 28627265 - NM_001172562 INTS9 1 2.03 1.21 45 6.66 78.51 41 4.85 No 71 0.68 No 0 0 No -36 0.69 Yes 34 90.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 28635465 - NM_001172562 INTS9 1 0.1 0.1 7 -0.78 0 9 3.87 No 71 0.74 No 0 0 No -38 0.59 No 38 68.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 28638212 - NM_001172562 INTS9 1 0.13 0.13 7 8.46 88.19 25 4.75 No 66 -3.59 No 0 0 No -27 0.48 No 43 55.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 28651868 - NM_001172562 INTS9 1 0.11 0.11 8 10.69 90.18 32 5.81 Yes 62 -4.26 No 0 0 No -31 0.46 No 41 39.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 28654124 - NM_001172562 INTS9 1 1 0.75 38 8.64 94.52 29 5.33 No 62 2.02 Yes 0 0 No -28 0.64 No 42 61.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 28673165 - NM_001172562 INTS9 1 0.3 0.19 11 11.7 97.2 26 5.89 Yes 13 1.09 Yes 0 0 No -25 0.86 Yes 45 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 102863582 + NR_134606 INVS 1 2.02 0.35 21 9.41 91.13 27 8.17 Yes 14 2.33 Yes 26 0.95 Yes -26 0.94 Yes 44 95.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 102863977 + NR_134606 INVS 1 2.16 0.4 24 5.34 72 23 5.65 Yes 76 0.56 No 0 0 No -22 0.86 Yes 48 78.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 102863988 + NR_134606 INVS 1 1.41 0.21 12 0.33 0 19 4.39 No 21 0.19 No 0 0 No -33 0.84 Yes 37 80.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 102864986 + NR_134606 INVS 1 9.12 1.53 56 5.52 83.62 30 5.25 No -3 0.2 No 0 0 No -30 0.63 No 40 78.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 102891957 + NR_134606 INVS 1 11.86 2.69 64 3.66 79.5 78 9.53 Yes 47 0.89 Yes 28 0.65 Yes -28 0.57 No 42 54.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 102894151 + NR_134606 INVS 1 13.97 3.26 65 6.57 86.63 16 5.24 No 28 0.64 No 29 0.83 Yes -29 0.48 No 41 78.89 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 102916645 + NR_134606 INVS 1 4.95 1.14 45 10.07 88.27 34 8.06 Yes 21 1.82 Yes 0 0 No -33 0.83 Yes 37 90.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 102918211 + NR_134606 INVS 1 1.19 0.26 17 6.04 73.44 27 6.33 Yes 14 0.71 No 0 0 No -26 0.76 Yes 44 76.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 102955285 + NR_134606 INVS 1 0.44 0.11 7 11.03 97.35 37 7.12 Yes 65 1.73 Yes 0 0 No -31 0.73 Yes 40 63.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 102977206 + NR_134606 INVS 1 22.04 5.07 71 10.45 87.63 18 4.16 No 5 1.33 Yes 0 0 No -28 0.69 Yes 53 70.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 102977682 + NR_134606 INVS 1 15.05 3.79 68 7.26 90.17 35 7.07 Yes 0 0.94 Yes 34 0.6 Yes -34 0.49 No 33 60.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 102988381 + NR_134606 INVS 1 1.13 0.22 12 5.4 81.84 32 4.23 No 72 1.25 Yes 0 0 No -23 0.78 Yes 47 67.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 102989762 + NR_134606 INVS 1 0.47 0.21 12 5.12 77.17 30 5.39 No 17 0.77 Yes 0 0 No -29 0.92 Yes 41 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 102998905 + NR_134606 INVS 1 1.11 0.44 20 4.56 81.96 22 4.69 No 50 1.08 Yes 0 0 No -21 0.86 Yes 49 86.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 103002320 + NR_134606 INVS 1 0.22 0.1 7 1.26 69.22 23 3.86 No 18 0.4 No 24 0.79 Yes -26 0.84 Yes 44 89.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 103003733 + NR_134606 INVS 1 1.38 0.67 32 10.53 85.23 82 7.98 Yes 69 2.47 Yes 0 0 No -23 0.49 No 39 55.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 103003756 + NR_134606 INVS 1 0.4 0.22 14 8.59 83.56 26 5.66 Yes 55 1.59 Yes 0 0 No -25 0.74 Yes 45 85.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 103005840 + NR_134606 INVS 1 1.98 0.79 36 7.54 80.86 42 6.77 Yes 5 0.66 No 0 0 No -41 0.88 Yes 29 95.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 103008886 + NR_134606 INVS 1 1.16 0.5 27 3.27 77 45 6.77 Yes 40 0.64 No 18 0.45 Yes -29 0.79 Yes 41 86.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 103014249 + NR_134606 INVS 1 0.99 0.38 24 6.6 79.57 37 6.26 Yes 28 0.6 No 0 0 No -36 0.51 No 34 68.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 103058005 + NR_134606 INVS 1 0.3 0.11 7 -0.05 74.3 13 4.59 No 13 0.49 No 0 0 No -25 0.88 Yes 45 73.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49765054 - NM_001242829 IP6K1 1 1.46 1.25 48 6.29 91.91 11 5 No 49 1.93 Yes 22 0.87 Yes -22 0.69 Yes 48 78.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 49775833 - NM_001242829 IP6K1 1 0.22 0.17 9 -0.43 82.89 28 5.66 Yes 44 1.26 Yes 0 0 No -27 0.85 Yes 43 91.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48727144 - NM_001005909 IP6K2 1 0.19 0.32 17 -12.6 0 49 6.93 Yes 68 -2.99 No 0 0 No -13 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 48730772 - NM_001005909 IP6K2 1 0.28 0.36 22 8.73 79.38 34 7.61 Yes 21 1.58 Yes 33 0.8 Yes -33 0.89 Yes 37 91.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48731674 - NM_001005909 IP6K2 1 9.6 11.57 72 12.3 98.88 31 7.14 Yes 18 1.84 Yes 30 0.92 Yes -30 0.93 Yes 40 83.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48731959 - NM_001005909 IP6K2 1 0.73 0.88 30 8.26 79.41 34 6.07 Yes 21 0.63 No 26 0.65 Yes -33 0.65 No 37 47.86 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 48732151 - NM_001005909 IP6K2 1 0.1 0.13 9 11.56 98.22 37 6.24 Yes 76 1.35 Yes 0 0 No -23 0.45 No 47 74.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 48732258 - NM_001005909 IP6K2 1 2.76 3.29 68 6.73 94.12 9 5.1 No 54 0.77 Yes 25 0.5 Yes -19 0.45 No 45 63.61 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 48732275 - NM_001005909 IP6K2 1 0.14 0.17 10 -9.25 0 16 3.98 No 72 1.35 Yes 25 0.5 Yes -49 0.69 Yes 21 80.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48732855 - NM_001005909 IP6K2 1 202.31 33.04 72 7.78 91.91 21 7.52 Yes 42 0.79 Yes 20 0.53 Yes -20 0.84 Yes 50 91.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48737222 - NM_001005909 IP6K2 1 2.44 0.32 17 10.73 88.1 25 5.57 Yes 50 1.85 Yes 24 0.86 Yes -24 0.71 Yes 46 73.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48745671 - NM_001005909 IP6K2 1 11.13 1.69 57 1.48 0 61 8.48 Yes 48 0.95 Yes 30 0.61 Yes -30 0.79 Yes 40 75.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48745675 - NM_001005909 IP6K2 1 3.01 0.29 15 -1.76 82.86 57 8.26 Yes 44 0.96 Yes 30 0.61 Yes -26 0.77 Yes 44 73.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48748893 - NM_001005909 IP6K2 1 4.15 0.56 26 10.88 91.98 23 5.2 No 59 0.55 No 22 0.52 Yes -22 0.66 Yes 48 41.99 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 48752961 - NM_001005909 IP6K2 1 29.16 4.06 71 8.58 78.5 25 5.39 No 21 0.52 No 23 0.86 Yes -25 0.57 No 46 73.57 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 48753911 - NM_001005909 IP6K2 1 1.41 0.19 12 10.02 90.36 20 5.68 Yes 7 1.47 Yes 19 0.83 Yes -19 0.73 Yes 51 85.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 154494230 - NM_001130699 IPCEF1 1 0.36 0.63 33 7.04 80.35 31 6.5 Yes 12 1.45 Yes 0 0 No -24 0.7 Yes 46 69.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 154506906 - NM_001130699 IPCEF1 1 0.14 0.29 16 10.13 86.44 17 5.78 Yes 4 0.82 Yes 0 0 No -27 0.5 No 38 33.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 154518590 - NM_001130699 IPCEF1 1 0.43 0.69 29 5.11 80.6 36 6.32 Yes 58 0.76 No 0 0 No -35 0.65 No 35 49.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 154536738 - NM_001130699 IPCEF1 1 0.14 0.31 17 2.3 83.14 28 6.63 Yes 56 0.99 Yes 0 0 No -27 0.43 No 34 61.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 154540194 - NM_001130699 IPCEF1 1 0.16 0.28 18 12.26 90.46 31 5.36 No 54 1.87 Yes 0 0 No -30 0.94 Yes 40 96.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 154542226 - NM_001130699 IPCEF1 1 0.11 0.21 14 9.52 81.46 28 6.16 Yes 30 0.58 No 0 0 No -25 0.62 No 45 48.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 154543577 - NM_001130699 IPCEF1 1 0.06 0.13 7 7.71 80.84 44 8.18 Yes 31 1.41 Yes 0 0 No -32 0.93 Yes 38 75.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 154544104 - NM_001130699 IPCEF1 1 0.38 0.82 28 3.63 77.99 37 7.12 Yes 24 1.25 Yes 0 0 No -36 0.41 No 34 76.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 154544374 - NM_001130699 IPCEF1 1 0.06 0.11 8 1.22 0 35 5.47 No 30 1.18 Yes 0 0 No -34 0.64 No 36 66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 154556659 - NM_001130699 IPCEF1 1 0.1 0.25 13 8.87 94.29 44 7.17 Yes 31 1.38 Yes 0 0 No -32 0.9 Yes 38 90.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 59986409 - NM_152230 IPMK 1 0.3 0.14 9 9.64 89.05 29 6.55 Yes 34 1.51 Yes 0 0 No -28 0.95 Yes 42 94.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 61718331 + NM_016338 IPO11 1 0.47 0.33 19 9.89 93.27 25 5.48 No 38 1.18 Yes 25 0.58 Yes -25 0.52 No 47 68.1 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 61726333 + NM_016338 IPO11 1 0.32 0.15 9 5.49 83.01 21 5.63 Yes 8 1.9 Yes 0 0 No -20 0.46 No 46 67.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 61744396 + NM_016338 IPO11 1 0.26 0.31 17 9.43 87.64 29 5.73 Yes 47 0.69 No 0 0 No -28 0.71 Yes 42 79.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 61762961 + NM_016338 IPO11 1 0.21 0.24 11 1.31 0 28 8.21 Yes 15 0.49 No 0 0 No -37 0.36 No 36 46.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 61779840 + NM_016338 IPO11 1 0.17 0.21 13 0.39 0 28 7.74 Yes 15 0.58 No 0 0 No -27 0.8 Yes 43 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 61781248 + NM_016338 IPO11 1 1.51 1.38 49 0.85 77.81 36 6.03 Yes 61 1 Yes 0 0 No -27 0.53 No 43 57.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 61829058 + NM_016338 IPO11 1 1.02 0.74 25 4.17 84.41 58 7.62 Yes 68 0.73 No 0 0 No -41 0.76 Yes 29 88.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 61834340 + NM_016338 IPO11 1 0.28 0.33 15 3.73 76.48 24 4.96 No 1 1.08 Yes 0 0 No -23 0.96 Yes 47 97.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 61836922 + NM_016338 IPO11 1 0.2 0.21 14 7.33 86.88 23 5.03 No 7 0.48 No 0 0 No -26 0.44 No 48 52.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 44415043 + NM_014652 IPO13 1 0.4 0.21 14 7.42 80.27 26 6 Yes 71 1.61 Yes 25 0.85 Yes -25 0.89 Yes 45 90.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 44415175 + NM_014652 IPO13 1 0.98 0.49 27 4.97 0 15 4.58 No 12 0.92 Yes 0 0 No -20 0.72 Yes 46 66.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 44415757 + NM_014652 IPO13 1 0.58 0.31 17 10.22 92.44 28 5.46 No 15 1.02 Yes 27 0.94 Yes -27 0.91 Yes 43 88.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 44422302 + NM_014652 IPO13 1 0.18 0.14 8 6.83 88.71 17 6.68 Yes 72 1.69 Yes 0 0 No -22 0.68 Yes 48 66.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 44422962 + NM_014652 IPO13 1 0.2 0.14 9 5.18 82.05 26 5.39 No 13 0.09 No 0 0 No -25 0.76 Yes 45 60.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 44429395 + NM_014652 IPO13 1 0.13 0.11 8 6.29 91.37 24 5.19 No 11 0.63 No 0 0 No -23 0.88 Yes 47 67.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 44433129 + NM_014652 IPO13 1 0.18 0.15 7 5.54 80.37 28 6.16 Yes 68 0.93 Yes 0 0 No -31 0.73 Yes 39 82.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24651630 - NM_024658 IPO4 1 2.16 2.01 44 2.67 78.54 25 3.8 No 76 -5.93 No 24 0.91 Yes -20 0.79 Yes 50 83.93 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24652045 - NM_024658 IPO4 1 0.42 0.49 27 -2.44 0 25 4.9 No 12 0.88 Yes 0 0 No -24 0.87 Yes 46 89.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24652332 - NM_024658 IPO4 1 0.07 0.14 10 7.17 84.62 23 5.38 No 42 1.21 Yes 0 0 No -22 0.57 No 48 61.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24652368 - NM_024658 IPO4 1 0.42 0.94 40 0.69 0 11 4.12 No 6 1.23 Yes 0 0 No -26 0.88 Yes 44 88.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24652368 - NM_024658 IPO4 1 0.07 0.14 8 0.69 0 11 4.12 No 6 1.23 Yes 0 0 No -26 0.88 Yes 44 88.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24652590 - NM_024658 IPO4 1 0.38 0.81 40 -0.69 68.11 37 6.56 Yes 24 0.06 No 0 0 No -36 0.84 Yes 34 46.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 24652593 - NM_024658 IPO4 1 0.18 0.38 20 2.55 59.63 34 6.32 Yes 21 0.06 No 0 0 No -33 0.89 Yes 37 58.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 24652693 - NM_024658 IPO4 1 0.48 0.86 38 1.12 56.09 13 6 Yes 41 1.04 Yes 0 0 No -49 0.52 No 21 45.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24652868 - NM_024658 IPO4 1 0.43 0.64 32 0.11 0 14 3.87 No 23 1.55 Yes 0 0 No -35 0.56 No 35 51.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24653623 - NM_024658 IPO4 1 0.08 0.11 7 -11.66 70.03 24 5.1 No 11 1.43 Yes 0 0 No -23 0.87 Yes 47 89.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24654557 - NM_024658 IPO4 1 0.1 0.17 10 10.65 83.43 25 5.54 No 46 1.38 Yes 0 0 No -29 0.55 No 43 71.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 24654579 - NM_024658 IPO4 1 0.1 0.15 10 2.72 77.13 22 5.19 No 24 1.4 Yes 0 0 No -53 0.76 Yes 17 62.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 24655994 - NM_024658 IPO4 1 0.07 0.13 9 -2.94 0 27 9.33 Yes 14 1.54 Yes 0 0 No -26 0.73 Yes 44 85.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24656312 - NM_024658 IPO4 1 0.14 0.29 17 2.37 78.42 16 5.19 No 46 1.21 Yes 0 0 No -47 0.37 No 55 35.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24656429 - NM_024658 IPO4 1 0.07 0.14 8 5.26 84.93 28 7.14 Yes 74 0.12 No 0 0 No -27 0.81 Yes 43 93.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 98642103 + NM_002271 IPO5 1 0.07 0.47 22 8.49 85.21 39 7.35 Yes 26 0.14 No 0 0 No -38 0.64 No 27 69.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 98642228 + NM_002271 IPO5 1 0.02 0.13 7 4.11 67.42 18 5.19 No 51 0.72 No 0 0 No -32 0.45 No 58 62.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 98643834 + NM_002271 IPO5 1 0.38 2.51 62 5.77 78.36 49 6.21 Yes 36 0.06 No 0 0 No -29 0.63 No 41 40.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 98644156 + NM_002271 IPO5 1 0.06 0.42 22 10.5 88.26 29 4.99 No 11 0.48 No 0 0 No -28 0.68 Yes 42 53.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 98654744 + NM_002271 IPO5 1 0.02 0.14 9 0.44 75.68 22 5.74 Yes 44 0.87 Yes 0 0 No -56 0.57 No 14 77.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 98657178 + NM_002271 IPO5 1 0.04 0.22 15 2.78 83.95 53 7.83 Yes 40 1.22 Yes 0 0 No -26 0.68 Yes 44 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 98658392 + NM_002271 IPO5 1 0.07 0.39 21 1.48 0 12 4.24 No 16 0.69 No 0 0 No -29 0.47 No 39 63.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 98659615 + NM_002271 IPO5 1 0.07 0.53 25 0 72.71 23 5 No 50 0.33 No 22 0.95 Yes -22 0.8 Yes 48 89.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 98660321 + NM_002271 IPO5 1 0.02 0.18 13 3.9 0 12 4.24 No 52 -1.29 No 0 0 No -40 0.56 No 30 72.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 98671837 + NM_002271 IPO5 1 0.05 0.35 20 -0.65 73.36 29 6.31 Yes 16 1.06 Yes 0 0 No -28 0.58 No 42 71.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 98674137 + NM_002271 IPO5 1 0.18 1.08 43 10.23 83.22 32 6.82 Yes 2 1.72 Yes 0 0 No -31 0.64 No 39 90.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 23441998 - NR_103741 IPO5P1 1 1.17 0.18 10 9.72 87.48 21 5.5 No 13 1.43 Yes 0 0 No -25 0.7 Yes 45 81.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 23442225 - NR_103741 IPO5P1 1 2.34 0.26 14 8.6 81.42 32 6.83 Yes 19 0.42 No 0 0 No -21 0.85 Yes 49 70.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 23442915 - NR_103741 IPO5P1 1 1.4 0.22 13 0.32 0 32 6.66 Yes 76 0.93 Yes 0 0 No -36 0.65 No 34 75.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 23455522 - NR_103741 IPO5P1 1 10.23 1.11 35 3.31 0 27 7.26 Yes 14 0.94 Yes 22 0.61 Yes -27 0.52 No 43 50.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 23455526 - NR_103741 IPO5P1 1 1.12 0.14 9 2.76 88.76 23 6.98 Yes 10 0.94 Yes 22 0.61 Yes -23 0.53 No 47 44.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 9408594 + NM_006391 IPO7 1 0.26 0.4 19 7.66 89.55 66 9.48 Yes 3 1.03 Yes 0 0 No -31 0.45 No 38 51.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 9413744 + NM_006391 IPO7 1 0.4 0.61 28 3.97 84.41 33 7.38 Yes 72 0.73 No 32 0.47 Yes -32 0.55 No 38 63.06 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 9432587 + NM_006391 IPO7 1 0.24 0.57 31 8.81 82.67 39 6.56 Yes 73 1.22 Yes 0 0 No -27 0.55 No 37 53.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 9435782 + NM_006391 IPO7 1 0.8 1.97 61 -3.85 0 11 3.87 No 30 -3.93 No 29 0.76 Yes -30 0.34 No 60 38.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 9437072 + NM_006391 IPO7 1 0.04 0.11 7 9.75 81.54 40 7.05 Yes 27 1.23 Yes 0 0 No -27 0.36 No 31 58.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 9438459 + NM_006391 IPO7 1 0.13 0.33 18 8.21 79.06 18 6.08 Yes 5 1.63 Yes 0 0 No -21 0.69 Yes 53 66.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 9438638 + NM_006391 IPO7 1 0.05 0.15 8 2.49 68.66 13 6.06 Yes 33 0.97 Yes 0 0 No -52 0.3 No 18 61.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 9442162 + NM_006391 IPO7 1 0.06 0.11 7 -7.77 0 15 6.08 Yes 2 0.88 Yes 0 0 No -27 0.46 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 9445366 + NM_006391 IPO7 1 0.1 0.25 15 5.69 76.46 38 6.18 Yes 64 1.4 Yes 0 0 No -33 0.45 No 33 57.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 9456482 + NM_006391 IPO7 1 0.09 0.22 14 -15.74 0 36 5.05 No 13 1.54 Yes 0 0 No -25 0.82 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 9461979 + NM_006391 IPO7 1 0.09 0.25 15 -0.38 67.44 26 5.99 Yes 13 0.34 No 29 0.65 Yes -25 0.7 Yes 45 79.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 30783890 - NM_006390 IPO8 1 0.35 0.21 11 -7.77 56.66 55 6.02 Yes 36 1.05 Yes 0 0 No -45 0.53 No 21 73.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 30784097 - NM_006390 IPO8 1 0.23 0.13 7 11.1 90.78 33 6.23 Yes 20 1.12 Yes 0 0 No -32 0.94 Yes 38 91.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 30792586 - NM_006390 IPO8 1 0.38 0.49 28 9.21 89.81 24 5.48 No 53 0.7 No 0 0 No -27 0.59 No 47 63.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 30815381 - NM_006390 IPO8 1 0.09 0.11 7 2.35 81.7 16 4.62 No 63 1.12 Yes 0 0 No -20 0.55 No 50 65.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 30816563 - NM_006390 IPO8 1 0.27 0.29 20 2.98 73.07 33 5.42 No 47 1.29 Yes 0 0 No -32 0.6 No 38 59.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 30818241 - NM_006390 IPO8 1 1.6 1.71 57 -1.34 72.55 30 5.52 No 9 0.06 No 0 0 No -29 0.89 Yes 41 73.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 30831466 - NM_006390 IPO8 1 0.17 0.24 14 5.98 68.82 28 6.02 Yes 15 0.6 No 0 0 No -31 0.74 Yes 39 63.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 30833571 - NM_006390 IPO8 1 0.11 0.13 8 -12.61 0 33 10.11 Yes 44 0.95 Yes 0 0 No -32 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 30838830 - NM_006390 IPO8 1 2.7 3.33 69 9.23 94.37 32 4.66 No 27 0.87 Yes 0 0 No -27 0.91 Yes 43 89.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 30839594 - NM_006390 IPO8 1 0.38 0.5 23 5.27 80.68 28 5.4 No 15 1.1 Yes 27 0.93 Yes -27 0.88 Yes 43 93.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 30843483 - NM_006390 IPO8 1 0.27 0.31 19 7.62 82.72 18 5.07 No 76 1.37 Yes 25 0.68 Yes -23 0.87 Yes 47 88.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 30848091 - NM_006390 IPO8 1 0.63 0.74 35 2.72 80.94 25 5.01 No 12 0.78 Yes 0 0 No -24 0.87 Yes 46 76.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 201804081 + NM_018085 IPO9 1 7.92 6.24 72 8.52 85.71 28 7.28 Yes 15 1.12 Yes 27 0.9 Yes -27 0.98 Yes 43 97.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 201819575 + NM_018085 IPO9 1 0.38 0.53 31 7.82 84.67 34 5.27 No 65 1.37 Yes 33 0.5 Yes -33 0.3 No 37 61.44 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 201827969 + NM_018085 IPO9 1 0.2 0.24 14 -3.14 0 13 4 No 49 1.19 Yes 25 0.88 Yes -47 0.6 No 23 72.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 201837620 + NM_018085 IPO9 1 0.6 0.89 37 11.3 94.67 23 5.39 No 60 0.75 No 0 0 No -22 0.58 No 51 66.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 201837745 + NM_018085 IPO9 1 0.35 0.49 27 -8.94 0 10 4.58 No 74 -5.71 No 26 0.47 Yes -30 0.54 No 58 34.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 201843956 + NM_018085 IPO9 1 0.84 0.4 23 1.76 77.71 27 3.63 No 24 0.12 No 23 0.78 Yes -26 0.7 Yes 50 75.15 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46174703 - NM_005897 IPP 1 0.93 0.28 19 4.74 84.41 44 7.97 Yes 31 1.87 Yes 0 0 No -43 0.77 Yes 27 66.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 46177969 - NM_005897 IPP 1 11.4 3.28 69 9.63 88.27 34 5.06 No 31 0.73 No 0 0 No -29 0.61 No 41 85.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 46180027 - NM_005897 IPP 1 9.44 2.96 65 2.23 64.63 35 6.4 Yes 22 0.95 Yes 0 0 No -34 0.85 Yes 36 90.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95397529 - NM_022755 IPPK 1 5.22 1.42 49 5.89 74.18 35 5.97 Yes 22 0.14 No 34 0.4 Yes -34 0.79 Yes 36 90.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 95397529 - NM_022755 IPPK 1 0.78 0.24 12 5.89 74.18 35 5.97 Yes 22 0.14 No 34 0.4 Yes -34 0.79 Yes 36 90.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 25363417 + NR_023915 IPW 1 7.84 2.08 57 0.8 65.21 70 8.37 Yes 57 0.61 No 0 0 No -51 0.42 No 29 12.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121504823 - NM_001023570 IQCB1 1 0.33 0.35 17 6.64 88.99 21 4.24 No 2 1.48 Yes 0 0 No -20 0.79 Yes 50 77.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121504823 - NM_001023570 IQCB1 1 1 1.17 39 6.64 88.99 21 4.24 No 2 1.48 Yes 0 0 No -20 0.79 Yes 50 77.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121507275 - NM_001023570 IQCB1 1 0.24 0.24 15 2.88 0 28 5.66 Yes 15 0.73 No 0 0 No -28 0.65 No 43 68.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121514455 - NM_001023570 IQCB1 1 0.21 0.17 9 8.09 85.05 22 5.51 No 29 1.23 Yes 20 0.46 Yes -29 0.74 Yes 41 91.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 121518141 - NM_001023570 IQCB1 1 0.22 0.22 14 4.39 79.37 27 4.91 No -3 0.18 No 0 0 No -26 0.67 Yes 44 78.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121525530 - NM_001023570 IQCB1 1 0.1 0.1 7 0.97 67.86 17 5.03 No 71 -5.61 No 0 0 No -22 0.78 Yes 48 49.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 121530594 - NM_001023570 IQCB1 1 0.46 0.42 21 7.59 88.31 26 6.32 Yes 13 0.73 No 0 0 No -25 0.93 Yes 45 95.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121531017 - NM_001023570 IQCB1 1 2.09 1.71 58 8.63 91.66 20 4.9 No 7 1.54 Yes 0 0 No -19 0.8 Yes 51 91.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121531722 - NM_001023570 IQCB1 1 0.93 0.72 34 8.59 81.71 28 5.45 No 59 -1.45 No 0 0 No -21 0.67 Yes 43 40.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 121538078 - NM_001023570 IQCB1 1 0.3 0.19 13 9.44 80.91 32 4.94 No 19 1.41 Yes 0 0 No -31 0.63 No 39 83.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 121547380 - NM_001023570 IQCB1 1 0.2 0.25 17 6.8 83.57 32 5.25 No 14 0.43 No 0 0 No -26 0.91 Yes 44 93.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121547819 - NM_001023570 IQCB1 1 5.16 4.1 66 -9.12 0 33 7.62 Yes 20 1.54 Yes 0 0 No -32 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 2611829 + NM_001287502 IQCE 1 1.14 0.13 8 -6.71 0 74 8.76 Yes 15 -2.54 No 0 0 No -26 0.68 Yes 44 41.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 2611839 + NM_001287502 IQCE 1 1.38 0.13 9 -5.9 0 17 4.36 No 25 -3.17 No 0 0 No -36 0.45 No 28 29.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 2615400 + NM_001287502 IQCE 1 1.72 0.14 8 6.79 82.83 28 7.09 Yes 53 0.25 No 0 0 No -27 0.95 Yes 43 93.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2641365 + NM_001287502 IQCE 1 4.3 0.33 21 6.85 91.79 17 5.29 No 4 1.03 Yes 0 0 No -21 0.4 No 54 76.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 90974452 + NM_003870 IQGAP1 1 0.03 0.13 8 11.09 91.27 24 5.48 No 28 0.41 No 23 0.6 Yes -23 0.76 Yes 47 80.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 90982564 + NM_003870 IQGAP1 1 0.05 0.24 15 -11.72 0 27 6.32 Yes 60 1.32 Yes 0 0 No -26 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 90983736 + NM_003870 IQGAP1 1 0.09 0.29 18 -1.1 71.32 25 5.35 No 16 1.24 Yes 0 0 No -24 0.57 No 42 62.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 90986629 + NM_003870 IQGAP1 1 0.05 0.19 12 1.78 0 34 6.64 Yes 21 1.16 Yes 0 0 No -33 0.75 Yes 37 87.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91009484 + NM_003870 IQGAP1 1 0.16 0.53 24 3.36 78.82 35 5.51 No 5 0.02 No 20 0.93 Yes -29 0.48 No 41 48.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 91010684 + NM_003870 IQGAP1 1 0.15 0.47 26 -10.83 78.72 16 5.45 No 68 -1.58 No 23 0.8 Yes -26 0.67 Yes 44 82.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 91025933 + NM_003870 IQGAP1 1 0.46 1.53 54 10.46 78.38 31 4.79 No 64 1.4 Yes 0 0 No -30 0.42 No 40 68.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91026595 + NM_003870 IQGAP1 1 0.05 0.15 8 -14.45 0 34 8 Yes 21 0.98 Yes 0 0 No -33 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 75737217 + NM_006633 IQGAP2 1 0.71 0.13 8 6.04 80.33 24 5.12 No 11 0.9 Yes 0 0 No -23 0.45 No 43 52.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 75758046 + NM_006633 IQGAP2 1 1.53 0.63 29 11.2 90 28 6.53 Yes 15 1.01 Yes 0 0 No -23 0.77 Yes 47 80.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 75852735 + NM_006633 IQGAP2 1 0.6 0.21 13 7.69 81.04 34 6.32 Yes 21 1.19 Yes 0 0 No -33 0.8 Yes 37 87.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 75866407 + NM_006633 IQGAP2 1 0.21 0.17 9 -0.47 67.1 55 7.02 Yes 42 1.34 Yes 0 0 No -54 0.91 Yes 16 96.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 75888667 + NM_006633 IQGAP2 1 0.35 0.19 14 0.53 0 23 5.25 No 70 0.56 No 0 0 No -26 0.9 Yes 44 82.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 75955852 + NM_006633 IQGAP2 1 0.24 0.17 10 2.98 70.06 46 7.21 Yes 33 1.23 Yes 40 0.16 Yes -45 0.85 Yes 25 87.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156532467 - NM_178229 IQGAP3 1 0.96 0.13 8 -9.19 72.57 20 5.1 No 58 -3.03 No 28 0.18 Yes -19 0.32 No 26 32.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156534379 - NM_178229 IQGAP3 1 2.08 0.15 10 7.36 92.5 26 3.83 No 4 0.23 No 0 0 No -25 0.6 No 45 60.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 156535225 - NM_178229 IQGAP3 1 2.67 0.54 31 11.33 84.94 53 7.52 Yes 64 -2.16 No 0 0 No -40 0.89 Yes 30 80.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153283935 - NM_001025243 IRAK1 1 0.05 0.15 11 5.6 78.43 20 5.08 No 53 2.13 Yes 0 0 No -19 0.56 No 16 36.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153284206 - NM_001025243 IRAK1 1 0.11 0.22 14 8.05 91.39 17 4.8 No 42 0.83 Yes 0 0 No -16 0.4 No 54 76.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 153284235 - NM_001025243 IRAK1 1 0.24 0.53 26 1.59 0 26 5.29 No 13 0.86 Yes 0 0 No -25 0.92 Yes 45 95.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153284521 - NM_001025243 IRAK1 1 0.51 0.85 42 1.29 0 13 3.63 No 15 1.28 Yes 0 0 No -27 0.94 Yes 43 96.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153284750 - NM_001025243 IRAK1 1 1.4 2.01 61 11.82 88.65 33 6.24 Yes 47 1.22 Yes 0 0 No -59 0.71 Yes 11 76.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 79587187 + NM_001010844 IRAK1BP1 1 1.72 0.22 14 7.06 82.89 29 6.31 Yes 16 0.93 Yes 0 0 No -28 0.86 Yes 42 82.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 79606400 + NM_001010844 IRAK1BP1 1 1.8 0.24 14 3.21 71.28 15 4.93 No 49 0.82 Yes 0 0 No -21 0.67 Yes 49 60.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 10276145 + NM_001570 IRAK2 1 0.9 0.17 10 2.25 78.76 36 6.08 Yes 23 1.18 Yes 0 0 No -35 0.87 Yes 35 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 44155374 + NM_001114182 IRAK4 1 1.35 0.38 22 11.5 91.11 19 5.3 No 37 0.72 No 0 0 No -25 0.93 Yes 45 95.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 44157104 + NM_001114182 IRAK4 1 1.38 0.36 23 4.62 68.81 39 7.06 Yes 7 0.33 No 22 0.59 Yes -22 0.45 No 48 32.6 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 44164840 + NM_001114182 IRAK4 1 7.48 2.75 68 -4.6 71.87 99 9.83 Yes 36 -0.01 No 34 0.42 Yes -34 0.66 No 22 55.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 44164849 + NM_001114182 IRAK4 1 1.22 0.47 28 -5.78 0 12 4.2 No -1 -0.91 No 0 0 No -43 0.39 No 13 62.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 44165025 + NM_001114182 IRAK4 1 0.59 0.22 12 -12.86 72.46 33 6.51 Yes 20 1.46 Yes 0 0 No -32 0.87 Yes 38 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 44178062 + NM_001114182 IRAK4 1 0.41 0.31 16 -0.5 64.04 49 7.75 Yes 31 0.1 No 0 0 No -48 0.71 Yes 22 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 44179866 + NM_001114182 IRAK4 1 0.2 0.14 10 3.01 0 27 7.28 Yes 14 0.18 No 0 0 No -26 0.75 Yes 44 79.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 44180205 + NM_001114182 IRAK4 1 1.17 0.85 35 -0.17 0 20 5.54 No 7 1.05 Yes 0 0 No -28 0.63 No 42 70.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 78753173 + NM_001320941 IREB2 1 0.29 0.43 25 10.57 95.2 29 6.4 Yes 2 0.76 No 0 0 No -29 0.79 Yes 41 88.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 78769697 + NM_001320941 IREB2 1 0.08 0.17 9 0.43 77 22 5.74 Yes 9 1.03 Yes 0 0 No -21 0.86 Yes 49 86.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 78790379 + NM_001320941 IREB2 1 0.18 0.26 13 -2.63 0 33 5.82 Yes 20 1.06 Yes 0 0 No -32 0.95 Yes 38 98.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131820332 - NM_002198 IRF1 1 0.1 0.22 12 5.03 80.61 48 7.48 Yes 70 -2.09 No 0 0 No -47 0.58 No 23 84.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131822335 - NM_002198 IRF1 1 0.04 0.11 8 2.91 70.89 23 6 Yes 10 1.65 Yes 0 0 No -22 0.75 Yes 48 73.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131822533 - NM_002198 IRF1 1 0.07 0.13 8 -4.47 0 25 5.39 No 12 1.43 Yes 0 0 No -24 0.88 Yes 46 90.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131825433 - NM_002198 IRF1 1 0.04 0.1 7 0.18 67.65 53 7.19 Yes 40 0.11 No 0 0 No -34 0.64 No 23 51.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 185311119 - NM_002199 IRF2 1 0.39 0.67 30 7.61 83.75 12 6.89 Yes -1 1.12 Yes 0 0 No -22 0.43 No 36 52.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 185320228 - NM_002199 IRF2 1 4.02 7.5 71 2.34 0 10 3.87 No 15 0.66 No 0 0 No -30 0.67 Yes 40 85.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 185328438 - NM_002199 IRF2 1 0.72 1.32 54 10.36 90.42 19 4.8 No 52 0.82 Yes 29 0.21 Yes -25 0.36 No 42 23.62 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 185339858 - NM_002199 IRF2 1 0.1 0.28 17 -3.19 0 47 8.66 Yes 34 2.1 Yes 0 0 No -46 0.84 Yes 24 91.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185348796 - NM_002199 IRF2 1 0.21 0.39 22 10.59 86.3 29 7.51 Yes 55 0.95 Yes 0 0 No -28 0.86 Yes 42 90.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185370205 - NM_002199 IRF2 1 1.32 2.56 62 8.44 87.62 28 6.93 Yes 15 1.24 Yes 0 0 No -27 0.93 Yes 43 96.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185375010 - NM_002199 IRF2 1 0.28 0.51 28 8.42 83.18 55 8.76 Yes 42 2.03 Yes 0 0 No -45 0.7 Yes 25 82.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185377122 - NM_002199 IRF2 1 0.06 0.13 7 9.78 94.36 25 6.78 Yes 12 2.17 Yes 0 0 No -24 0.65 No 46 82.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 185377203 - NM_002199 IRF2 1 0.36 0.67 32 9.62 90.24 25 6.24 Yes 71 -3.48 No 0 0 No -24 0.93 Yes 46 86.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 185395414 - NM_002199 IRF2 1 0.49 0.89 36 4.23 79.63 25 7.37 Yes 4 0.96 Yes 0 0 No -24 0.88 Yes 46 88.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50164102 - NM_001197123 IRF3 1 18.04 14.4 72 8.42 76.13 13 5.74 Yes 0 0.11 No 26 0.76 Yes -26 0.84 Yes 44 75.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50164102 - NM_001197123 IRF3 1 0.74 0.56 24 8.42 76.13 13 5.74 Yes 0 0.11 No 26 0.76 Yes -26 0.84 Yes 44 75.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50164883 - NM_001197123 IRF3 1 0.2 0.15 9 0.96 69.25 23 4.84 No 58 -3.88 No 22 0.88 Yes -22 0.69 Yes 48 77.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50165637 - NM_001197123 IRF3 1 0.1 0.14 10 -1.19 66.99 16 4.69 No 69 -4.8 No 0 0 No -15 0.24 No 48 26.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50165871 - NM_001197123 IRF3 1 0.1 0.19 13 -0.82 0 30 7.35 Yes 17 1.69 Yes 0 0 No -29 0.81 Yes 41 89.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50166492 - NM_001197123 IRF3 1 0.05 0.11 8 -0.3 0 30 5.36 No 29 1.75 Yes 0 0 No -29 0.91 Yes 41 90.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50166496 - NM_001197123 IRF3 1 0.06 0.13 8 0.01 75.49 26 4.99 No 25 1.76 Yes 0 0 No -25 0.9 Yes 45 93.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 393077 + NM_002460 IRF4 1 0.08 0.44 27 2.58 74.23 29 5.45 No 66 -4.57 No 23 0.93 Yes -23 0.48 No 47 27.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 393102 + NM_002460 IRF4 1 0.88 5.33 68 2.49 0 29 5.39 No 16 0.48 No 0 0 No -28 0.8 Yes 42 78.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 395459 + NM_002460 IRF4 1 0.01 0.24 15 -0.98 70.05 17 4.77 No 4 0.35 No 0 0 No -21 0.75 Yes 49 65.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 395486 + NM_002460 IRF4 1 1.72 27.28 72 5 75.59 32 5.62 Yes 31 0.39 No 0 0 No -31 0.81 Yes 39 69.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 395842 + NM_002460 IRF4 1 0.26 4.1 68 4.28 0 32 7.06 Yes 67 0.58 No 35 0.85 Yes -31 0.79 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 397110 + NM_002460 IRF4 1 0.09 0.89 34 6.82 88.15 31 5.37 No 65 1.16 Yes 0 0 No -25 0.73 Yes 40 83.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 397110 + NM_002460 IRF4 1 52.72 517.71 72 6.82 88.15 31 5.37 No 65 1.16 Yes 0 0 No -25 0.73 Yes 40 83.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 401330 + NM_002460 IRF4 1 0.01 0.18 12 -2.44 58.08 45 7.87 Yes 32 1.19 Yes 0 0 No -44 0.93 Yes 26 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 408716 + NM_002460 IRF4 1 0.01 0.21 15 5.62 80.78 54 8.19 Yes 41 0.81 Yes 0 0 No -54 0.62 No 16 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 402022 + NM_002460 IRF4 1 0.02 0.26 13 5.28 84.38 31 6.08 Yes 18 0.57 No 0 0 No -30 0.96 Yes 40 96.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 402158 + NM_002460 IRF4 1 0.01 0.11 7 8.28 90.31 18 6 Yes 63 1.25 Yes 0 0 No -17 0.44 No 44 56.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 404920 + NM_002460 IRF4 1 0.02 0.28 17 9.22 86.71 23 4.32 No 1 1.17 Yes 0 0 No -22 0.58 No 50 52.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 405019 + NM_002460 IRF4 1 0.02 0.25 15 -8.56 63 34 5.05 No 70 0.94 Yes 0 0 No -33 0.76 Yes 37 81.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 406765 + NM_002460 IRF4 1 0.03 0.46 26 8.12 91.16 17 6.46 Yes -1 0.36 No 26 0.55 Yes -26 0.55 No 44 50.1 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 407458 + NM_002460 IRF4 1 0.22 3.07 66 -3.05 0 32 6.46 Yes 19 1.33 Yes 0 0 No -35 0.69 Yes 35 87.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 407504 + NM_002460 IRF4 1 0.03 0.44 21 1.76 61.73 28 6.22 Yes 65 1.33 Yes 0 0 No -22 0.42 No 35 59.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 408098 + NM_002460 IRF4 1 0.01 0.17 10 8.87 80.42 26 5.22 No 31 0.89 Yes 0 0 No -25 0.71 Yes 45 59.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 408103 + NM_002460 IRF4 1 0.02 0.32 20 2.18 0 31 5.46 No 36 0.88 Yes 0 0 No -30 0.72 Yes 40 57.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 408716 + NM_002460 IRF4 1 0.09 1.19 43 5.62 80.78 54 8.19 Yes 41 0.81 Yes 0 0 No -54 0.62 No 16 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 128581332 + NM_001098627 IRF5 1 33.46 2.56 67 8 82.4 27 5.57 Yes 14 -1.05 No 24 0.8 Yes -24 0.83 Yes 46 72.97 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 128583108 + NM_001098627 IRF5 1 0.08 0.18 13 2.3 84.41 44 6.85 Yes 31 1.98 Yes 37 0.4 Yes -32 0.65 No 38 74.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 128583112 + NM_001098627 IRF5 1 0.48 1.18 47 4.19 0 48 7.14 Yes 35 1.97 Yes 37 0.4 Yes -36 0.63 No 34 73.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 128587082 + NM_001098627 IRF5 1 0.15 0.46 30 1.77 0 9 3.87 No 50 2.18 Yes 0 0 No -53 0.32 No 29 11.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 128587283 + NM_001098627 IRF5 1 0.54 0.64 31 8.4 76.18 28 5.66 Yes 15 0.95 Yes 27 0.93 Yes -27 0.92 Yes 43 88.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 128587333 + NM_001098627 IRF5 1 0.15 0.18 11 -7.94 75.52 25 6.93 Yes 65 0.95 Yes 0 0 No -24 0.86 Yes 46 83.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128587283 + NM_001098627 IRF5 1 134.82 155.33 72 8.4 76.18 28 5.66 Yes 15 0.95 Yes 27 0.93 Yes -27 0.92 Yes 43 88.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 128587289 + NM_001098627 IRF5 1 0.5 0.63 30 -0.89 0 15 2.84 No 21 0.95 Yes 22 0.77 Yes -33 0.9 Yes 37 78.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 128587333 + NM_001098627 IRF5 1 0.21 0.29 15 -7.94 75.52 25 6.93 Yes 65 0.95 Yes 0 0 No -24 0.86 Yes 46 83.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128587390 + NM_001098627 IRF5 1 0.15 0.18 11 5.34 81.46 40 6.12 Yes 69 0.87 Yes 0 0 No -24 0.74 Yes 38 59.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 128587541 + NM_001098627 IRF5 1 0.11 0.13 7 7.37 88.07 17 4.8 No 49 -0.44 No 0 0 No -18 0.58 No 54 66.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 128588243 + NM_001098627 IRF5 1 0.14 0.46 26 2.1 0 14 4.47 No 37 1.09 Yes 25 0.96 Yes -49 0.27 No 21 51.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 128588283 + NM_001098627 IRF5 1 1.94 6.19 71 4.35 79.75 27 4.5 No 33 1.2 Yes 0 0 No -26 0.85 Yes 44 80.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 612822 - NM_004029 IRF7 1 0.06 0.13 7 3.45 71.34 9 5.66 Yes 58 -4.07 No 25 0.96 Yes -22 0.45 No 60 23.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 613116 - NM_004029 IRF7 1 1.22 2.51 62 -4.83 71.47 23 4.9 No 10 0.58 No 0 0 No -22 0.96 Yes 48 93.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 613612 - NM_004029 IRF7 1 0.29 0.57 22 7.51 79.07 35 6.15 Yes 52 1.62 Yes 20 0.96 Yes -34 0.95 Yes 36 95.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 614038 - NM_004029 IRF7 1 701.5 159.35 72 10.79 86.18 20 5.14 No 61 -4.01 No 28 0.71 Yes -19 0.64 No 51 66.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 614038 - NM_004029 IRF7 1 32.04 7.38 71 10.79 86.18 20 5.14 No 61 -4.01 No 28 0.71 Yes -19 0.64 No 51 66.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 614532 - NM_004029 IRF7 1 12.71 21.97 72 5.25 82.23 27 8.49 Yes 14 2.32 Yes 23 0.96 Yes -26 0.94 Yes 44 92.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 615373 - NM_004029 IRF7 1 0.11 0.15 9 7.54 80.6 25 6.47 Yes 12 1.89 Yes 0 0 No -24 0.7 Yes 46 67.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 85934533 + NM_002163 IRF8 1 0.16 0.14 9 7.62 92.34 25 7 Yes 41 1.79 Yes 24 0.94 Yes -24 0.81 Yes 46 94.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 85936598 + NM_002163 IRF8 1 0.24 0.21 12 2.52 73.59 31 4.51 No 50 0.9 Yes 26 0.87 Yes -26 0.45 No 44 48.22 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 85943089 + NM_002163 IRF8 1 1.93 6.43 71 6.11 90.25 25 5.27 No 12 1.06 Yes 0 0 No -24 0.95 Yes 46 95.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85943092 + NM_002163 IRF8 1 0.06 0.21 12 5.74 86.9 28 5.54 No 15 1.07 Yes 0 0 No -27 0.95 Yes 43 95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85945499 + NM_002163 IRF8 1 0.04 0.13 7 11.15 83.09 27 5.29 No 14 1.62 Yes 0 0 No -26 0.97 Yes 44 97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85946679 + NM_002163 IRF8 1 0.34 1.11 45 -5.8 58.12 35 6.32 Yes 64 0.78 Yes 0 0 No -34 0.91 Yes 36 97.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85946685 + NM_002163 IRF8 1 0.05 0.19 14 -3.45 0 13 3.87 No 70 0.77 Yes 0 0 No -40 0.91 Yes 30 96.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24632279 + NM_006084 IRF9 1 0.94 2.21 58 0.81 75.23 22 4.67 No -4 0.09 No 0 0 No -21 0.93 Yes 49 73.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 24633251 + NM_006084 IRF9 1 0.45 0.88 39 3.58 69.37 22 5.26 No -3 0.36 No 0 0 No -24 0.42 No 49 36.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24633277 + NM_006084 IRF9 1 0.06 0.13 8 3.5 0 9 3.87 No 19 1.31 Yes 0 0 No -31 0.77 Yes 39 81.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24633795 + NM_006084 IRF9 1 2.01 2.9 62 5.19 80.1 20 5.1 No 74 -0.03 No 21 0.52 Yes -19 0.72 Yes 51 67.89 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 24633801 + NM_006084 IRF9 1 0.19 0.28 14 -0.71 0 9 3.87 No NA NA NA 0 0 No -25 0.77 Yes 45 67.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 24633956 + NM_006084 IRF9 1 0.35 0.57 31 -0.85 74.04 13 4.9 No 35 -0.99 No 0 0 No -20 0.64 No 46 47.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24634046 + NM_006084 IRF9 1 0.07 0.11 8 4.47 83.99 24 4.78 No 35 -2.05 No 0 0 No -24 0.63 No 46 50.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24634085 + NM_006084 IRF9 1 0.39 0.64 30 3.88 71.36 28 6.89 Yes 74 -2.02 No 0 0 No -41 0.73 Yes 29 60.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 24634262 + NM_006084 IRF9 1 0.19 0.31 19 4 81.99 35 7.4 Yes 60 0.21 No 20 0.26 Yes -35 0.58 No 35 64.28 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 24634265 + NM_006084 IRF9 1 2.41 3.58 68 7.73 81.75 38 7.59 Yes 63 0.21 No 20 0.26 Yes -38 0.46 No 32 53.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 88881100 - NM_030940 ISCA1 1 0.24 0.19 11 -9.42 0 10 3.77 No 18 1.16 Yes 0 0 No -30 0.8 Yes 40 78.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 88881104 - NM_030940 ISCA1 1 0.15 0.13 7 -16.27 75.82 27 6.71 Yes 14 1.17 Yes 0 0 No -26 0.81 Yes 44 78.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 88881428 - NM_030940 ISCA1 1 0.18 0.18 9 -6.08 60.96 32 6.04 Yes 19 0.21 No 0 0 No -34 0.94 Yes 36 94.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 88882743 - NM_030940 ISCA1 1 0.2 0.15 9 5.12 84.41 32 6.98 Yes 19 1.15 Yes 24 0.75 Yes -32 0.65 No 38 62.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 88886138 - NM_030940 ISCA1 1 0.63 0.43 23 5.22 83 21 4 No 3 1.14 Yes 0 0 No -29 0.54 No 41 63.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 88887024 - NM_030940 ISCA1 1 0.35 0.32 16 4.13 0 37 3.89 No 5 0.62 No 0 0 No -25 0.45 No 45 64.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 108957417 + NR_135127 ISCU 1 0.67 0.13 8 7.15 78.47 26 7.13 Yes 13 1.05 Yes 0 0 No -31 0.86 Yes 39 85.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 949384 + NM_005101 ISG15 1 0.02 0.21 14 -2.33 60.71 10 5.48 No -3 0.78 Yes 0 0 No -41 0.39 No 29 40.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 949408 + NM_005101 ISG15 1 0.03 0.29 14 2.12 71.59 34 5.71 Yes 53 -3.02 No 0 0 No -33 0.6 No 57 45.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 89198650 + NM_001303236 ISG20 1 0.51 2.49 62 -1.25 0 40 6.31 Yes 27 0.79 Yes 34 0.6 Yes -39 0.69 Yes 31 81.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156697601 - NM_001303095 ISG20L2 1 13.1 0.6 29 9.81 95.38 19 5.16 No 44 1.82 Yes 23 0.8 Yes -18 0.78 Yes 52 80.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 76633938 + NM_145805 ISL2 1 14.6 1.38 42 11.84 90.26 67 8.74 Yes 32 1.74 Yes 0 0 No -44 0.76 Yes 26 47.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 55966746 - NM_001136202 ISOC2 1 21.74 14.76 72 6.55 85.96 69 8.16 Yes 15 2.13 Yes 23 0.96 Yes -27 0.54 No 43 63.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 55967213 - NM_001136202 ISOC2 1 307.01 164.18 72 6.67 76.92 27 6.4 Yes 14 2.5 Yes 26 0.93 Yes -26 0.79 Yes 44 90.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 55968145 - NM_001136202 ISOC2 1 0.2 0.49 24 6.22 70.07 29 4.14 No 1 0.43 No 0 0 No -28 0.51 No 49 29.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 55968580 - NM_001136202 ISOC2 1 0.48 1.03 39 6.96 83.76 63 7.46 Yes 59 -1.76 No 24 0.35 Yes -43 0.67 Yes 27 64.59 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 71937067 + NM_001270975 IST1 1 0.18 0.35 19 7.37 86.44 21 7.21 Yes 8 1.91 Yes 20 0.69 Yes -20 0.85 Yes 50 94.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 71949504 + NM_001270975 IST1 1 0.74 1.47 55 -1.15 58.59 19 5.98 Yes 0 0.25 No 23 0.69 Yes -18 0.41 No 52 49.06 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 71952043 + NM_001270975 IST1 1 0.12 0.32 17 6.87 89.53 31 6.29 Yes 59 0.49 No 0 0 No -30 0.7 Yes 40 63.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 71956254 + NM_001270975 IST1 1 0.27 0.71 30 13.96 92.58 25 7.35 Yes 12 1.94 Yes 0 0 No -24 0.84 Yes 46 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 71956380 + NM_001270975 IST1 1 0.12 0.31 18 3.42 0 30 7.69 Yes 72 1.6 Yes 0 0 No -32 0.69 Yes 38 67.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 71956428 + NM_001270975 IST1 1 0.09 0.21 14 5.64 81.32 16 5.53 No 65 1.34 Yes 0 0 No -19 0.91 Yes 51 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 71957194 + NM_001270975 IST1 1 1.07 2.33 65 3.26 0 28 6.63 Yes 15 1.77 Yes 0 0 No -27 0.92 Yes 43 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 71958675 + NM_001270975 IST1 1 0.15 0.29 15 1.85 0 23 5.51 No 34 1.44 Yes 18 0.61 Yes -22 0.7 Yes 48 69.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 71958713 + NM_001270975 IST1 1 0.11 0.24 13 5.88 87.44 24 5.18 No 72 1.43 Yes 0 0 No -23 0.81 Yes 47 94.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 71957993 + NM_001270975 IST1 1 0.28 0.54 23 8.35 76.68 40 6.78 Yes 27 1.6 Yes 39 0.69 Yes -39 0.81 Yes 31 90.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 71958675 + NM_001270975 IST1 1 2.19 4.29 71 1.85 0 23 5.51 No 34 1.44 Yes 18 0.61 Yes -22 0.7 Yes 48 69.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 71958713 + NM_001270975 IST1 1 7.74 15.26 72 5.88 87.44 24 5.18 No 72 1.43 Yes 0 0 No -23 0.81 Yes 47 94.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 71961594 + NM_001270975 IST1 1 0.07 0.21 14 6.96 89.36 25 5.5 No 6 0.49 No 0 0 No -24 0.73 Yes 46 68.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 128859325 - NM_001204890 ISY1-RAB43 1 0.65 1.35 48 -3.21 0 40 5.33 No 27 1.69 Yes 0 0 No -39 0.74 Yes 31 94.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 128863033 - NM_001204890 ISY1-RAB43 1 0.17 0.39 21 7.43 73.57 85 10.77 Yes 72 2.63 Yes 28 0.44 Yes -28 0.36 No 43 42.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 128869539 - NM_001204890 ISY1-RAB43 1 0.16 0.24 10 1.52 83 31 4.65 No 28 0.71 No 0 0 No -30 0.63 No 40 59.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 32951824 + NM_001324197 ITCH 1 0.17 0.11 8 6.43 91.75 17 5.19 No 26 0.81 Yes 0 0 No -26 0.4 No 48 61.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 32953265 + NM_001324197 ITCH 1 0.93 0.67 33 4.34 87.6 15 5.72 Yes 2 1.57 Yes 0 0 No -26 0.76 Yes 44 40.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 32985013 + NM_001324197 ITCH 1 3.22 4.26 70 4.94 77.08 20 6 Yes 7 1.16 Yes 0 0 No -19 0.72 Yes 51 86.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33017993 + NM_001324197 ITCH 1 0.22 0.32 13 10.53 87.8 33 4.65 No 59 0.95 Yes 0 0 No -18 0.42 No 52 64.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 33043464 + NM_001324197 ITCH 1 0.24 0.32 17 8.78 85.22 32 7.94 Yes 19 1.65 Yes 0 0 No -31 0.95 Yes 39 95.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33059202 + NM_001324197 ITCH 1 0.13 0.22 12 7.27 85.48 34 4.56 No 17 0.56 No 0 0 No -33 0.4 No 37 33.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33067499 + NM_001324197 ITCH 1 0.68 0.92 41 6.53 82.89 32 6.21 Yes 72 0.47 No 26 0.56 Yes -31 0.5 No 39 64.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 33077047 + NM_001324197 ITCH 1 0.35 0.46 24 5.31 73.28 14 4.01 No 48 0.23 No 27 0.88 Yes -26 0.37 No 43 23.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 47192846 - NM_030790 ITFG1 1 0.42 0.61 29 7.31 74.63 25 5.67 Yes 12 0.6 No 24 0.76 Yes -34 0.76 Yes 36 80.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 47196513 - NM_030790 ITFG1 1 1.27 1.4 53 6.54 75.57 27 6.03 Yes 40 0.23 No 27 0.51 Yes -23 0.44 No 47 45.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 47237429 - NM_030790 ITFG1 1 0.11 0.13 8 10.52 79.76 32 6.59 Yes 19 1.39 Yes 0 0 No -31 0.81 Yes 39 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 47291673 - NM_030790 ITFG1 1 0.15 0.13 7 9.44 94.25 12 6.31 Yes 69 -4.05 No 0 0 No -22 0.77 Yes 48 89.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 47347748 - NM_030790 ITFG1 1 1.35 2.06 64 1.87 65.89 15 4.63 No 40 -2.05 No 27 0.45 Yes -21 0.52 No 28 44.15 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 47397120 - NM_030790 ITFG1 1 0.24 0.36 21 6.29 84.4 29 4.52 No 4 1.13 Yes 0 0 No -22 0.75 Yes 48 52.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 47410866 - NM_030790 ITFG1 1 0.76 1.14 48 -2.22 0 41 7.59 Yes 28 1.81 Yes 0 0 No -40 0.54 No 30 75.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 47417813 - NM_030790 ITFG1 1 0.28 0.4 22 4.57 83.78 28 5.29 No 15 1.35 Yes 0 0 No -27 0.86 Yes 43 92.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 47433481 - NM_030790 ITFG1 1 0.09 0.11 7 3.61 84.41 22 6 Yes 9 1.6 Yes 0 0 No -30 0.67 Yes 40 65.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 47454181 - NM_030790 ITFG1 1 0.32 0.47 26 7.39 96.37 25 5.26 No 12 0.46 No 0 0 No -24 0.96 Yes 46 98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 47459197 - NM_030790 ITFG1 1 0.06 0.11 7 5.37 66.88 32 6.29 Yes 19 0.97 Yes 0 0 No -27 0.58 No 39 77.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 47460260 - NM_030790 ITFG1 1 0.4 0.6 30 10.07 85.38 76 6.89 Yes 46 0.75 No 30 0.34 Yes -29 0.42 No 41 58.46 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 47462022 - NM_030790 ITFG1 1 0.33 0.51 30 7.63 88.99 15 5.05 No 2 1.51 Yes 0 0 No -24 0.77 Yes 46 57.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 47471379 - NM_030790 ITFG1 1 2.45 3.82 70 12.16 100 24 4.25 No 11 0.03 No 0 0 No -23 0.32 No 47 56.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 47484365 - NM_030790 ITFG1 1 0.4 0.5 17 8.44 89.67 31 6.85 Yes 18 1.23 Yes 22 0.85 Yes -30 0.67 Yes 40 66.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 2929949 + NR_130744 ITFG2 1 1.31 0.44 22 2.5 73.35 43 7.24 Yes 67 0.77 Yes 0 0 No -21 0.58 No 28 64.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 2929953 + NR_130744 ITFG2 1 1.08 0.38 23 2.3 0 47 7.5 Yes 71 0.77 Yes 0 0 No -25 0.55 No 49 51.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 2930838 + NR_130744 ITFG2 1 0.3 0.15 9 3.35 70.68 18 6.44 Yes 61 -2.61 No 21 0.91 Yes -35 0.7 Yes 53 32.09 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 52178711 + NM_181501 ITGA1 1 0.61 0.1 7 8.47 76.98 53 7.09 Yes 2 1.25 Yes 22 0.77 Yes -31 0.5 No 39 57.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 48152754 + NM_002204 ITGA3 1 0.86 0.13 7 2.66 0 34 6.08 Yes 76 -1.12 No 0 0 No -33 0.46 No 39 44.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 182322994 + NM_000885 ITGA4 1 0.05 0.13 9 3.56 69.71 24 5.14 No 62 -2.01 No 0 0 No -23 0.58 No 43 58.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 182323337 + NM_000885 ITGA4 1 0.16 0.54 26 4.82 68.18 42 7.07 Yes 29 1.01 Yes 0 0 No -44 0.85 Yes 26 93.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 182332269 + NM_000885 ITGA4 1 0.06 0.17 8 8.91 81.06 29 6.4 Yes 16 2.53 Yes 0 0 No -28 0.92 Yes 42 94.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 182339690 + NM_000885 ITGA4 1 0.23 0.69 36 -2.36 0 30 7.52 Yes 17 0.53 No 0 0 No -29 0.75 Yes 41 77.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 182340546 + NM_000885 ITGA4 1 0.13 0.31 17 5.34 79.15 34 5.9 Yes 69 0.79 Yes 20 0.9 Yes -20 0.91 Yes 50 91.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 182346333 + NM_000885 ITGA4 1 0.04 0.14 9 -4.68 0 13 4.09 No 20 1.4 Yes 0 0 No -32 0.93 Yes 38 94.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 182348882 + NM_000885 ITGA4 1 0.07 0.29 16 8.2 81.42 62 7.61 Yes 49 1.43 Yes 0 0 No -29 0.77 Yes 30 53.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 182350816 + NM_000885 ITGA4 1 0.17 0.63 30 8.81 84.03 29 4.53 No 16 0.24 No 0 0 No -28 0.6 No 42 66.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 182352106 + NM_000885 ITGA4 1 0.36 1.26 44 6.73 77.85 26 5.76 Yes 36 -2.35 No 0 0 No -25 0.71 Yes 45 70.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 182359450 + NM_000885 ITGA4 1 0.02 0.11 7 -1.58 77.36 21 7.1 Yes 8 1.22 Yes 0 0 No -20 0.64 No 50 51.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 182363445 + NM_000885 ITGA4 1 0.04 0.11 8 3.3 79.28 44 6.37 Yes 0 0.95 Yes 0 0 No -24 0.87 Yes 46 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 182363350 + NM_000885 ITGA4 1 0.04 0.14 9 -13.59 0 27 5.58 Yes 64 0.87 Yes 0 0 No -26 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 182363445 + NM_000885 ITGA4 1 2.38 7.93 71 3.3 79.28 44 6.37 Yes 0 0.95 Yes 0 0 No -24 0.87 Yes 46 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 182363598 + NM_000885 ITGA4 1 0.13 0.57 27 5.82 70.17 31 6.63 Yes 74 0.51 No 0 0 No -30 0.88 Yes 40 92.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 182374388 + NM_000885 ITGA4 1 0.49 2.32 62 -1.22 0 31 6.36 Yes 40 0.33 No 0 0 No -30 0.76 Yes 40 55.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 182379719 + NM_000885 ITGA4 1 0.23 0.68 30 5.62 83.96 25 4.76 No 72 0.5 No 0 0 No -18 0.37 No 52 44.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 182381154 + NM_000885 ITGA4 1 0.11 0.4 22 6.13 86.05 17 5.57 Yes 4 1.12 Yes 0 0 No -22 0.62 No 48 69.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 182384670 + NM_000885 ITGA4 1 0.08 0.22 13 5.37 79.65 67 8.67 Yes 54 0.88 Yes 0 0 No -23 0.38 No 42 38.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 182388901 + NM_000885 ITGA4 1 0.11 0.38 22 1.27 0 46 5.43 No 20 0.67 No 0 0 No -32 0.82 Yes 38 86.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 182390953 + NM_000885 ITGA4 1 0.04 0.18 7 7.92 86.05 32 5.23 No 11 0.01 No 0 0 No -23 0.94 Yes 47 95.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 182396362 + NM_000885 ITGA4 1 0.12 0.53 28 3.36 68.15 56 5.78 Yes 73 -2.81 No 27 0.88 Yes -34 0.3 No 36 37.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 182399518 + NM_000885 ITGA4 1 0.05 0.19 12 -0.8 80.53 23 6.75 Yes 10 1.23 Yes 26 0.8 Yes -27 0.52 No 43 62.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 182399859 + NM_000885 ITGA4 1 0.03 0.11 8 3.5 77.47 15 5.56 Yes 55 1.54 Yes 0 0 No -21 0.69 Yes 49 75.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30485285 + NM_002209 ITGAL 1 1.41 1.35 43 10.25 93.04 26 6.29 Yes 13 2.11 Yes 25 0.93 Yes -25 0.91 Yes 45 91.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30485881 + NM_002209 ITGAL 1 0.18 0.13 7 4.15 74.08 24 5.88 Yes 55 -2.43 No 24 0.55 Yes -24 0.35 No 41 42.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 30486609 + NM_002209 ITGAL 1 3.51 2.43 59 8.76 87.53 15 5.66 Yes 59 -3.24 No 25 0.75 Yes -25 0.75 Yes 45 67.39 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 30495152 + NM_002209 ITGAL 1 0.23 0.32 18 -4.32 0 29 6.56 Yes 16 1.26 Yes 0 0 No -28 0.94 Yes 42 95.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30506001 + NM_002209 ITGAL 1 0.31 0.25 15 9.85 90.82 20 6.48 Yes 51 -2.16 No 26 0.68 Yes -20 0.46 No 51 61.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 30507763 + NM_002209 ITGAL 1 0.31 0.31 18 -2.99 0 10 4 No 26 0.4 No 0 0 No -33 0.78 Yes 37 89.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30509126 + NM_002209 ITGAL 1 0.2 0.28 17 7.22 85.99 33 6.24 Yes 33 0.64 No 0 0 No -32 0.81 Yes 38 86.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30510441 + NM_002209 ITGAL 1 0.63 0.71 34 9.24 86.64 17 7.23 Yes 4 1.96 Yes 22 0.9 Yes -22 0.93 Yes 48 81.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30510693 + NM_002209 ITGAL 1 1.38 2.19 59 6.35 84.83 16 6.56 Yes 49 1.22 Yes 21 0.42 Yes -61 0.42 No 49 57.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 30516567 + NM_002209 ITGAL 1 171.78 65.69 72 5.29 85.61 44 7.37 Yes 36 1.15 Yes 25 0.75 Yes -43 0.72 Yes 27 85.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30518068 + NM_002209 ITGAL 1 0.07 0.11 7 2.43 80.66 15 5.83 Yes 60 2.1 Yes 0 0 No -27 0.49 No 43 56.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 30522213 + NM_002209 ITGAL 1 0.16 0.25 11 5.97 0 15 4.58 No 37 1.79 Yes 23 0.76 Yes -52 0.86 Yes 18 74.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 31289273 + NM_001145808 ITGAM 1 0.59 0.15 9 5.95 85.05 10 5.48 No 43 -1.89 No 23 0.88 Yes -19 0.27 No 47 38.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 187501270 + NM_001145000 ITGAV 1 0.72 0.21 10 10.14 88.39 30 5.68 Yes 39 1.05 Yes 0 0 No -25 0.62 No 45 64.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 187508333 + NM_001145000 ITGAV 1 0.41 0.11 8 7.86 75.83 51 7.03 Yes 44 1.18 Yes 0 0 No -50 0.63 No 37 70.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 187532375 + NM_001145000 ITGAV 1 2.16 0.76 38 6.1 72.65 28 8.26 Yes 15 1.09 Yes 29 0.88 Yes -27 0.85 Yes 43 87.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 33209326 - NM_033668 ITGB1 1 0.07 0.13 8 8.02 71.54 39 5.28 No 9 0.98 Yes 18 0.47 Yes -31 0.62 No 39 60.13 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 33218961 - NM_033668 ITGB1 1 0.11 0.19 12 4.08 0 19 4.46 No 45 0.83 Yes 0 0 No -38 0.66 No 32 62.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 33222512 - NM_033668 ITGB1 1 1.11 1.17 47 11.14 88.21 34 5.53 No 21 0.7 No 33 0.62 Yes -33 0.69 Yes 37 64.58 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 9547714 - NR_134951 ITGB1BP1 1 1.49 3.39 61 1.87 84.62 21 3.43 No 12 0.93 Yes 0 0 No -44 0.63 No 46 71.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 9548331 - NR_134951 ITGB1BP1 1 2.53 5.19 70 -4.39 0 38 6.67 Yes 25 0.62 No 0 0 No -31 0.45 No 39 47.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 9552785 - NR_134951 ITGB1BP1 1 0.09 0.25 17 8.59 88.14 28 6.15 Yes 15 1.94 Yes 0 0 No -27 0.69 Yes 43 75.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 46306816 - NM_001127491 ITGB2 1 0.43 0.94 36 -9.2 77.06 31 5.57 Yes 18 1.5 Yes 0 0 No -24 0.6 No 46 68.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 46311804 - NM_001127491 ITGB2 1 0.06 0.11 7 3.49 0 22 4.58 No 9 1.15 Yes 0 0 No -21 0.94 Yes 49 93.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 46311900 - NM_001127491 ITGB2 1 0.15 0.28 18 5.46 0 10 4.58 No 20 0.38 No 0 0 No -20 0.75 Yes 38 24.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 46313383 - NM_001127491 ITGB2 1 0.06 0.13 8 7.1 83.9 21 3.91 No 14 0.34 No 0 0 No -20 0.85 Yes 50 84.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 46314735 - NM_001127491 ITGB2 1 0.1 0.24 13 8.24 80.54 13 5.29 No 75 -2.63 No 0 0 No -21 0.83 Yes 49 87.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 46318529 - NM_001127491 ITGB2 1 0.11 0.26 17 4.89 76.34 22 3.79 No 6 1.04 Yes 0 0 No -21 0.55 No 49 67.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 46321500 - NM_001127491 ITGB2 1 0.21 0.39 21 1.89 65.6 19 5.38 No 6 0.43 No 0 0 No -18 0.41 No 52 37.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 46321534 - NM_001127491 ITGB2 1 0.17 0.32 21 7.03 92.19 20 5.1 No 49 0.37 No 0 0 No -19 0.78 Yes 51 73.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 46328098 - NM_001127491 ITGB2 1 7.82 11.5 24 8.28 90.88 25 5.6 Yes 37 0.98 Yes 24 0.88 Yes -24 0.95 Yes 46 95.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 46329407 - NM_001127491 ITGB2 1 0.39 0.63 21 5.43 87.92 24 6.22 Yes 11 1.62 Yes 23 0.97 Yes -23 0.91 Yes 47 92.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 46330331 - NM_001127491 ITGB2 1 1.28 1.9 37 5.73 75.14 36 8.66 Yes 23 2.45 Yes 35 0.91 Yes -35 0.92 Yes 35 96.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 63908867 - NM_001206739 ITGB3BP 1 0.12 0.17 12 8.33 78.29 21 6.18 Yes 8 1.19 Yes 20 0.69 Yes -28 0.41 No 37 41.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 63913281 - NM_001206739 ITGB3BP 1 0.74 0.69 36 -2.38 0 61 8.6 Yes 48 1.72 Yes 0 0 No -29 0.66 No 18 62.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 63915487 - NM_001206739 ITGB3BP 1 10.85 11.69 72 8.62 93.03 30 6.84 Yes 66 0.55 No 30 0.82 Yes -29 0.49 No 41 51.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 63916289 - NM_001206739 ITGB3BP 1 0.27 0.28 16 1.72 77.12 27 5.72 Yes 14 0.14 No 0 0 No -29 0.81 Yes 41 71.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 63917736 - NM_001206739 ITGB3BP 1 2.28 2.5 61 9.76 88.68 33 4.98 No 43 0.69 No 23 0.82 Yes -23 0.55 No 47 44.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 63917833 - NM_001206739 ITGB3BP 1 0.37 0.4 21 9.74 98.76 55 4.84 No 6 0.51 No 0 0 No -22 0.58 No 48 50.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 63919483 - NM_001206739 ITGB3BP 1 0.51 0.53 28 9.75 92.52 23 5.39 No 29 0.56 No 0 0 No -22 0.64 No 48 65.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 63919503 - NM_001206739 ITGB3BP 1 0.35 0.4 24 5.3 74.7 22 7.78 Yes 9 0.54 No 21 0.88 Yes -21 0.75 Yes 49 86.57 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 63924045 - NM_001206739 ITGB3BP 1 6.21 7.74 72 10.08 83.71 26 6.53 Yes 53 2.02 Yes 25 0.67 Yes -25 0.58 No 45 87.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 63924045 - NM_001206739 ITGB3BP 1 0.39 0.42 22 10.08 83.71 26 6.53 Yes 53 2.02 Yes 25 0.67 Yes -25 0.58 No 45 87.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 63924045 - NM_001206739 ITGB3BP 1 0.24 0.29 16 10.08 83.71 26 6.53 Yes 53 2.02 Yes 25 0.67 Yes -25 0.58 No 45 87.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 63927688 - NM_001206739 ITGB3BP 1 0.37 0.42 25 10.98 94.39 28 4.62 No 45 1.14 Yes 0 0 No -27 0.83 Yes 43 90.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 63929620 - NM_001206739 ITGB3BP 1 0.12 0.15 10 9.37 94.63 38 5.18 No 55 0.64 No 0 0 No -24 0.58 No 46 71.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 63943221 - NM_001206739 ITGB3BP 1 0.12 0.14 9 -0.2 80.08 23 7.35 Yes 10 1.28 Yes 0 0 No -22 0.82 Yes 48 84.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 63944504 - NM_001206739 ITGB3BP 1 0.07 0.14 7 -17.76 0 36 11.75 Yes 23 1.23 Yes 0 0 No -35 0.61 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 63952445 - NM_001206739 ITGB3BP 1 2.89 5.21 67 9.2 80.47 37 6.86 Yes 64 0.97 Yes 0 0 No -31 0.95 Yes 39 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 63968098 - NM_001206739 ITGB3BP 1 0.12 0.19 11 7.3 89.58 20 5.87 Yes 7 0.82 Yes 0 0 No -24 0.75 Yes 46 68.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 63971869 - NM_001206739 ITGB3BP 1 0.1 0.17 12 4.37 78.79 32 6.55 Yes 60 -5.21 No 0 0 No -31 0.73 Yes 39 83.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53585416 - NM_000889 ITGB7 1 0.64 3.42 68 1.16 0 27 6.29 Yes 71 0.32 No 0 0 No -29 0.94 Yes 41 95.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53585516 - NM_000889 ITGB7 1 0.61 3.24 63 5.51 77.87 28 6.98 Yes 54 1.57 Yes 27 0.86 Yes -27 0.57 No 43 57.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 53587661 - NM_000889 ITGB7 1 0.02 0.13 9 4.79 76.51 23 5.83 Yes 31 1.49 Yes 0 0 No -27 0.66 No 43 85.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 53588393 - NM_000889 ITGB7 1 0.08 0.35 16 7.01 82.49 40 7.57 Yes 74 0.76 No 0 0 No -27 0.89 Yes 43 90.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53588803 - NM_000889 ITGB7 1 0.13 0.72 35 10.77 88.08 25 6.6 Yes 12 1.24 Yes 0 0 No -27 0.8 Yes 43 80.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53589312 - NM_000889 ITGB7 1 1.23 4.99 70 9.35 86.17 18 6.23 Yes 36 -0.21 No 0 0 No -31 0.78 Yes 39 90.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53589432 - NM_000889 ITGB7 1 0.02 0.11 8 7.06 82.09 30 4.8 No 43 -0.94 No 0 0 No -22 0.77 Yes 48 83.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53589485 - NM_000889 ITGB7 1 0.17 0.9 38 6.3 81.64 18 5.02 No 34 1.85 Yes 0 0 No -46 0.93 Yes 24 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53589627 - NM_000889 ITGB7 1 0.03 0.14 8 8.66 77.56 33 7.27 Yes 20 1.27 Yes 0 0 No -32 0.71 Yes 38 91.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53589978 - NM_000889 ITGB7 1 0.62 2.43 63 -4.6 0 13 3.87 No 0 0.5 No 0 0 No -13 0.67 Yes 58 33.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 53591064 - NM_000889 ITGB7 1 0.27 0.71 32 5.44 92.66 22 5 No 9 0.1 No 0 0 No -21 0.93 Yes 49 86.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53594710 - NM_000889 ITGB7 1 0.04 0.1 7 7.45 85.05 27 5.74 Yes 14 1.17 Yes 0 0 No -26 0.88 Yes 44 88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53600554 - NM_000889 ITGB7 1 0.11 0.4 24 4.22 78.63 33 6.01 Yes 38 2.04 Yes 0 0 No -19 0.7 Yes 51 82.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53600589 - NM_000889 ITGB7 1 0.46 1.99 54 7.36 85.74 16 6 Yes 3 2.07 Yes 22 0.66 Yes -29 0.58 No 48 70.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 20379895 + NM_002214 ITGB8 1 3.61 0.69 35 7.18 86.79 28 6.24 Yes 61 0.13 No 0 0 No -24 0.65 No 46 82.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 20395596 + NM_002214 ITGB8 1 2.14 0.43 24 5.2 66.6 33 7.89 Yes 20 1.27 Yes 0 0 No -30 0.58 No 38 67.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 20403262 + NM_002214 ITGB8 1 1 0.22 13 -0.9 70.62 26 5.48 No 13 1.25 Yes 0 0 No -25 0.58 No 44 72.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 20423619 + NM_002214 ITGB8 1 0.26 0.25 13 10.03 84.65 27 6.73 Yes 5 1.07 Yes 0 0 No -26 0.8 Yes 44 65.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 20429896 + NM_002214 ITGB8 1 0.28 0.14 10 4.41 76.1 22 6.2 Yes 9 1.45 Yes 0 0 No -21 0.63 No 43 60.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 20431572 + NM_002214 ITGB8 1 0.21 0.19 12 3.31 0 14 4.47 No 9 0.49 No 0 0 No -21 0.69 Yes 49 88.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 20434540 + NM_002214 ITGB8 1 0.43 0.19 11 8.21 85.51 27 5.57 Yes 61 1.68 Yes 0 0 No -26 0.69 Yes 44 61.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 20438485 + NM_002214 ITGB8 1 0.27 0.21 11 -2.87 69.63 69 6.66 Yes 56 1.3 Yes 0 0 No -26 0.72 Yes 44 57.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 20441456 + NM_002214 ITGB8 1 1.6 0.35 17 2.01 77.31 48 8.51 Yes 74 -5.48 No 0 0 No -28 0.88 Yes 42 71.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 20448861 + NM_002214 ITGB8 1 0.18 0.14 9 6.46 82.82 29 6.76 Yes 16 0.7 No 0 0 No -28 0.6 No 42 64.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 48813361 + NM_021999 ITM2B 1 0.07 0.14 9 6.67 83.91 63 9.08 Yes 50 0.33 No 0 0 No -31 0.78 Yes 39 60.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 231740394 + NM_001012516 ITM2C 1 0.36 1.26 44 8.7 88.68 21 5.2 No 35 0.72 No 0 0 No -23 0.88 Yes 47 83.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 3193903 + NM_001324240 ITPA 1 0.59 1.11 47 6.3 82.29 35 7.07 Yes 22 1.54 Yes 34 0.84 Yes -34 0.95 Yes 36 95.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 3194636 + NM_001324240 ITPA 1 0.1 0.21 13 -1.99 0 13 3.79 No 67 -2.05 No 0 0 No -31 0.96 Yes 39 94.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 3195927 + NM_001324240 ITPA 1 0.05 0.14 8 -11.42 0 25 7 Yes 12 2.18 Yes 0 0 No -24 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 3198043 + NM_001324240 ITPA 1 0.04 0.13 9 9.1 89.61 22 5.7 Yes 9 2.08 Yes 0 0 No -30 0.67 Yes 40 83.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3198299 + NM_001324240 ITPA 1 0.04 0.14 8 7.8 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -24 0.63 No 46 70.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 93413916 - NM_001142594 ITPK1 1 0.14 0.15 9 10.84 89.91 30 5.48 No 17 0.35 No 0 0 No -29 0.87 Yes 41 77.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 93460359 - NM_001142594 ITPK1 1 0.06 0.11 7 -1.13 0 40 6.78 Yes -2 1.13 Yes 26 0.91 Yes -31 0.3 No 60 72.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 93460511 - NM_001142594 ITPK1 1 0.06 0.11 7 2.47 0 16 4.58 No 66 0.92 Yes 0 0 No -19 0.44 No 51 53.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 93466544 - NM_001142594 ITPK1 1 0.14 0.22 13 5.58 76.37 31 7.22 Yes 59 -4.79 No 0 0 No -30 0.83 Yes 40 92.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 93542961 - NM_001142594 ITPK1 1 0.11 0.11 7 -2.71 0 34 6.63 Yes 21 2 Yes 0 0 No -33 0.82 Yes 37 90.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 41244711 + NM_025194 ITPKC 1 1.16 0.33 21 6.45 86.98 28 5.19 No 15 0.23 No 0 0 No -22 0.62 No 48 70.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 4619113 + NM_002222 ITPR1 1 0.19 0.14 7 6 77.98 31 4.64 No 18 0.5 No 0 0 No -30 0.86 Yes 40 88.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 4767229 + NM_002222 ITPR1 1 3.65 1.24 44 4.39 70.56 27 6.72 Yes 14 2.05 Yes 26 0.96 Yes -26 0.82 Yes 44 94.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 4768806 + NM_002222 ITPR1 1 2.99 1.08 42 1.23 72.39 24 6.42 Yes 48 0.79 Yes 26 0.64 Yes -23 0.63 No 47 62.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 4768809 + NM_002222 ITPR1 1 4.21 1.51 55 3.7 81.55 27 6.64 Yes 51 0.78 Yes 26 0.64 Yes -26 0.7 Yes 44 58.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 4833638 + NM_002222 ITPR1 1 3.33 2.38 58 6.24 85.29 29 6.27 Yes 0 0.77 No 0 0 No -28 0.73 Yes 42 92.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26505425 - NM_002223 ITPR2 1 0.13 0.25 12 7.53 82.94 17 5.57 Yes 4 1.86 Yes 0 0 No -21 0.65 No 49 57.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 26505624 - NM_002223 ITPR2 1 0.1 0.17 10 10.6 96.32 21 5.38 No 30 1.85 Yes 0 0 No -29 0.81 Yes 41 54.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 26520409 - NM_002223 ITPR2 1 0.21 0.36 17 8.6 91.39 31 9.11 Yes 53 2.31 Yes 0 0 No -30 0.84 Yes 40 71.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26524074 - NM_002223 ITPR2 1 0.91 1.46 45 6.04 78.5 38 6.08 Yes 29 0.77 Yes 0 0 No -30 0.66 No 40 77.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 26537470 - NM_002223 ITPR2 1 0.24 0.35 14 8.24 87.28 19 5.66 Yes 6 0.56 No 0 0 No -18 0.64 No 52 89.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 26540243 - NM_002223 ITPR2 1 0.08 0.13 7 6.6 68.58 24 6.02 Yes 59 0.62 No 0 0 No -27 0.6 No 40 70.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 26550020 - NM_002223 ITPR2 1 0.12 0.22 13 10.11 87.71 21 5.83 Yes 72 -4.57 No 0 0 No -27 0.87 Yes 43 94.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26553584 - NM_002223 ITPR2 1 0.17 0.24 13 8.33 85.52 40 6.64 Yes 27 0.97 Yes 0 0 No -39 0.85 Yes 31 88.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26555849 - NM_002223 ITPR2 1 0.21 0.24 14 6.03 74.16 13 4.7 No 59 2.39 Yes 0 0 No -31 0.63 No 41 60.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 26555957 - NM_002223 ITPR2 1 0.7 0.79 35 9.7 87.47 35 5.74 Yes 30 0.97 Yes 0 0 No -34 0.55 No 43 63.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 26564342 - NM_002223 ITPR2 1 0.1 0.25 16 1.79 0 39 8 Yes 26 0.27 No 0 0 No -26 0.7 Yes 44 62.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 26564916 - NM_002223 ITPR2 1 0.06 0.17 11 7.42 87.93 28 6.32 Yes 15 0.24 No 0 0 No -24 0.67 Yes 46 91.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26574318 - NM_002223 ITPR2 1 0.8 1.54 50 10.69 91.25 26 5.64 Yes 30 -2.42 No 0 0 No -29 0.4 No 41 62.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 26578943 - NM_002223 ITPR2 1 0.08 0.13 9 2.78 71.9 34 7.59 Yes 21 1.93 Yes 0 0 No -33 0.92 Yes 37 96.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26579042 - NM_002223 ITPR2 1 0.11 0.21 13 4.17 72.79 34 5.46 No 18 0.66 No 0 0 No -23 0.44 No 47 41.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 26582596 - NM_002223 ITPR2 1 0.15 0.25 14 7.87 87.07 62 7.96 Yes 49 0.79 Yes 0 0 No -34 0.54 No 36 60.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 26598064 - NM_002223 ITPR2 1 0.16 0.42 20 9.47 86.46 42 6.51 Yes 29 1.14 Yes 0 0 No -30 0.49 No 40 64.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 26625414 - NM_002223 ITPR2 1 0.07 0.1 7 6.57 83.7 29 5.83 Yes 73 -3.07 No 0 0 No -32 0.8 Yes 38 84.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26631315 - NM_002223 ITPR2 1 0.07 0.14 9 6.14 85.95 24 5 No 11 1.23 Yes 0 0 No -23 0.92 Yes 47 96.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26634829 - NM_002223 ITPR2 1 0.04 0.1 7 8.03 95.28 31 7.26 Yes 18 0.38 No 0 0 No -30 0.54 No 40 76.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 26634987 - NM_002223 ITPR2 1 0.46 0.88 35 7.79 84.11 30 6.45 Yes 17 0.53 No 0 0 No -29 0.89 Yes 41 80.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26635383 - NM_002223 ITPR2 1 0.29 0.56 31 10.61 93.61 33 6.66 Yes 17 0.19 No 0 0 No -27 0.48 No 38 49.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 26639290 - NM_002223 ITPR2 1 0.25 0.56 27 -2.92 0 26 5.48 No 45 -3.35 No 0 0 No -26 0.63 No 44 60.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 26639867 - NM_002223 ITPR2 1 2.25 4.43 67 1.32 67.23 64 9.29 Yes 51 1.64 Yes 25 0.65 Yes -34 0.59 No 36 22.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 26663565 - NM_002223 ITPR2 1 1.19 1.92 52 3.26 64.36 74 9.95 Yes 61 1.48 Yes 0 0 No -52 0.48 No 18 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 26680904 - NM_002223 ITPR2 1 0.12 0.21 12 5.7 71.53 33 7.14 Yes 20 2.07 Yes 0 0 No -32 0.91 Yes 38 96.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26687140 - NM_002223 ITPR2 1 0.07 0.13 8 7.71 82.11 28 6.56 Yes 15 0.85 Yes 0 0 No -27 0.73 Yes 43 76.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26752992 - NM_002223 ITPR2 1 0.21 0.57 31 4.01 83.27 25 5.1 No 48 -3.79 No 0 0 No -24 0.41 No 43 48.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 26779880 - NM_002223 ITPR2 1 0.12 0.19 14 9.76 98.16 36 4.93 No 9 0.72 No 0 0 No -25 0.53 No 45 45.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 26780415 - NM_002223 ITPR2 1 1.07 2.39 60 10.68 91.95 36 8.24 Yes 23 1.61 Yes 0 0 No -35 0.62 No 35 79.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 26806969 - NM_002223 ITPR2 1 0.15 0.36 21 6.92 76.43 26 5.39 No 13 0.43 No 0 0 No -25 0.92 Yes 45 96.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26807016 - NM_002223 ITPR2 1 0.06 0.19 9 4.99 78.05 21 7.03 Yes 67 1.56 Yes 0 0 No -20 0.91 Yes 50 87.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26808784 - NM_002223 ITPR2 1 0.15 0.31 18 -9.09 0 33 6.69 Yes 20 0.83 Yes 0 0 No -32 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 26809755 - NM_002223 ITPR2 1 0.15 0.26 17 6.72 85.26 23 4.9 No 10 0.74 No 0 0 No -22 0.82 Yes 48 84.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26810776 - NM_002223 ITPR2 1 0.22 0.51 26 3.7 86.2 23 4.8 No 46 -3.44 No 0 0 No -22 0.54 No 48 78.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 26810853 - NM_002223 ITPR2 1 0.34 0.78 34 1.86 77.04 21 4.9 No 24 0.97 Yes 32 0.63 Yes -20 0.93 Yes 50 91.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 26811704 - NM_002223 ITPR2 1 0.11 0.24 12 8.45 78.33 17 4.59 No 63 0.17 No 0 0 No -30 0.62 No 40 70.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 26816803 - NM_002223 ITPR2 1 0.56 1.5 50 2.69 0 24 6.16 Yes 76 0.37 No 30 0.31 Yes -10 0.67 Yes 46 54.77 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 26822606 - NM_002223 ITPR2 1 0.15 0.38 21 5.36 68.13 30 9.32 Yes 17 2.32 Yes 0 0 No -29 0.89 Yes 41 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26822723 - NM_002223 ITPR2 1 1.09 2.32 60 9.82 86.04 19 6.24 Yes 32 1.61 Yes 0 0 No -25 0.7 Yes 45 91.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26833657 - NM_002223 ITPR2 1 0.69 1.35 45 5.25 84.94 38 4.35 No 70 -1.73 No 0 0 No -26 0.4 No 45 28.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 26837408 - NM_002223 ITPR2 1 0.23 0.44 26 3.77 75.45 30 5.59 Yes 37 0.45 No 0 0 No -30 0.74 Yes 40 69.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 26838747 - NM_002223 ITPR2 1 0.07 0.13 8 6.64 84.57 18 4.79 No 43 -3.21 No 0 0 No -24 0.66 Yes 46 61.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 26847828 - NM_002223 ITPR2 1 0.05 0.11 7 7.4 83.53 26 7.24 Yes 13 1.55 Yes 0 0 No -25 0.85 Yes 30 61.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 26852371 - NM_002223 ITPR2 1 0.25 0.57 17 12.51 91.41 24 5.28 No 11 0.09 No 0 0 No -23 0.63 No 47 89.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 26854165 - NM_002223 ITPR2 1 1.22 2.29 28 7.14 78.49 28 7.31 Yes 15 0.86 Yes 0 0 No -27 0.95 Yes 43 97.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 26854398 - NM_002223 ITPR2 1 0.44 0.88 43 12.58 89.37 30 5.8 Yes 17 0.82 Yes 0 0 No -29 0.72 Yes 41 62.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 26868402 - NM_002223 ITPR2 1 0.22 0.42 26 7.38 85.83 17 6.16 Yes 4 1.25 Yes 25 0.85 Yes -29 0.5 No 43 59.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 26875691 - NM_002223 ITPR2 1 0.05 0.17 9 0.95 71.51 55 7.42 Yes 42 0.13 No 0 0 No -54 0.65 No 16 63.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 26878668 - NM_002223 ITPR2 1 0.25 0.49 26 4.6 74.23 21 5.09 No 23 0.18 No 0 0 No -59 0.47 No 50 76.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 26922357 - NM_002223 ITPR2 1 0.31 0.71 32 10.65 93.01 20 3.71 No 7 0.09 No 0 0 No -30 0.69 Yes 51 66.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 26923503 - NM_002223 ITPR2 1 1.15 2.1 59 6.33 76.39 25 5.9 Yes 72 1.18 Yes 0 0 No -24 0.44 No 46 55.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 26962687 - NM_002223 ITPR2 1 0.2 0.33 18 9.93 81.13 31 5.48 No 61 0.58 No 0 0 No -30 0.82 Yes 43 82.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26971439 - NM_002223 ITPR2 1 1.34 1.69 55 9.67 90.43 28 5.74 Yes 15 0.72 No 0 0 No -27 0.95 Yes 43 94.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26979158 - NM_002223 ITPR2 1 0.06 0.1 7 4.22 88.27 28 5.54 No 15 0.41 No 0 0 No -27 0.9 Yes 43 92.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 26985230 - NM_002223 ITPR2 1 0.08 0.13 8 6.49 76.36 47 7.61 Yes 34 0.51 No 0 0 No -24 0.46 No 31 34.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 33623556 + NM_002224 ITPR3 1 0.46 0.25 14 3.5 79.6 22 4.56 No 25 1.94 Yes 0 0 No -37 0.55 No 24 57.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 33626323 + NM_002224 ITPR3 1 0.32 0.17 10 7.27 86.47 21 5.2 No 32 -1.37 No 0 0 No -20 0.89 Yes 50 91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 33626461 + NM_002224 ITPR3 1 0.32 0.17 9 -0.47 70.39 24 4.9 No 31 2.17 Yes 0 0 No -23 0.88 Yes 47 48.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 33631279 + NM_002224 ITPR3 1 0.46 0.19 12 -10.88 74.47 25 6.32 Yes 66 1.01 Yes 0 0 No -28 0.65 No 48 67.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 33633624 + NM_002224 ITPR3 1 0.41 0.13 9 4.63 81.36 20 4.69 No 7 1.52 Yes 0 0 No -19 0.85 Yes 51 82.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 33636732 + NM_002224 ITPR3 1 0.55 0.31 18 8.07 82.81 36 6 Yes 35 -1.14 No 22 0.94 Yes -25 0.48 No 51 73.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 33638854 + NM_002224 ITPR3 1 1.05 0.42 23 8.31 75.01 19 7.78 Yes 6 1.43 Yes 0 0 No -21 0.96 Yes 49 95.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 33638985 + NM_002224 ITPR3 1 0.36 0.13 8 5.9 85.24 21 6.26 Yes 8 0.97 Yes 0 0 No -20 0.91 Yes 50 90.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 33645542 + NM_002224 ITPR3 1 0.72 0.38 20 10.82 96.62 23 6.86 Yes 46 1.61 Yes 0 0 No -22 0.95 Yes 48 97.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 33647703 + NM_002224 ITPR3 1 0.38 0.14 8 -0.61 64.76 30 6.39 Yes 57 1.06 Yes 0 0 No -29 0.57 No 41 36.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 33650537 + NM_002224 ITPR3 1 0.43 0.14 8 10.26 90.15 25 5.43 No 12 1.48 Yes 0 0 No -24 0.81 Yes 46 85.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 33653406 + NM_002224 ITPR3 1 0.57 0.24 15 -1.78 0 12 4.24 No 72 -3.54 No 18 0.96 Yes -17 0.44 No 36 24.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 33655032 + NM_002224 ITPR3 1 0.18 0.11 7 0.18 0 22 4.37 No 6 -1.22 No 0 0 No -21 0.86 Yes 49 58.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 33659395 + NM_002224 ITPR3 1 0.77 0.36 16 1.4 0 30 6.75 Yes 17 1.33 Yes 0 0 No -21 0.53 No 49 63.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 33659584 + NM_002224 ITPR3 1 0.34 0.19 9 -7.97 0 17 3.21 No 15 0.65 No 0 0 No -27 0.9 Yes 43 85.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 33660620 + NM_002224 ITPR3 1 1.32 0.58 29 5.02 64.62 86 10.13 Yes 73 1.63 Yes 0 0 No -26 0.84 Yes 44 46.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 33660810 + NM_002224 ITPR3 1 0.75 0.49 21 4.24 87.94 28 5.36 No 7 0.65 No 0 0 No -27 0.75 Yes 43 83.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24429145 - NM_001348181 ITSN2 1 9.31 3.71 66 10.99 98.98 19 5.74 Yes 6 -0.31 No 26 0.85 Yes -26 0.9 Yes 44 87.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24431306 - NM_001348181 ITSN2 1 0.3 0.13 9 0.5 0 19 4.47 No 41 1.08 Yes 0 0 No -18 0.9 Yes 52 89.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24465076 - NM_001348181 ITSN2 1 242.53 114.81 72 12.28 91.79 16 6.03 Yes 3 0.9 Yes 27 0.79 Yes -27 0.92 Yes 43 94.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24469157 - NM_001348181 ITSN2 1 0.37 0.65 34 4.86 74.24 23 5.82 Yes 49 0.96 Yes 0 0 No -22 0.38 No 48 66.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24471750 - NM_001348181 ITSN2 1 0.16 0.19 10 -6.07 78.5 33 9.81 Yes 55 1.86 Yes 0 0 No -25 0.57 No 45 56.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24477296 - NM_001348181 ITSN2 1 0.11 0.18 12 -3.37 0 68 10.08 Yes 55 1.32 Yes 0 0 No -58 0.93 Yes 12 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24480855 - NM_001348181 ITSN2 1 0.23 0.42 23 3.91 75.84 24 7.2 Yes 11 0.43 No 0 0 No -26 0.45 No 39 56.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24483225 - NM_001348181 ITSN2 1 0.71 1.25 43 8.07 89.95 23 6.38 Yes 10 1.23 Yes 0 0 No -26 0.59 No 44 63.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24487962 - NM_001348181 ITSN2 1 4.77 7.42 72 5.25 74.29 29 4.96 No 74 0.28 No 0 0 No -28 0.76 Yes 42 84.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24516636 - NM_001348181 ITSN2 1 0.18 0.25 14 -4.46 0 15 3.59 No 25 0.57 No 0 0 No -37 0.68 Yes 33 75.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24517887 - NM_001348181 ITSN2 1 0.64 0.89 38 1.79 81 26 4.91 No 59 0.57 No 0 0 No -22 0.47 No 48 43.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24531597 - NM_001348181 ITSN2 1 0.39 0.74 37 6.68 90.8 27 5.95 Yes 14 0.9 Yes 0 0 No -26 0.79 Yes 44 69.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24533478 - NM_001348181 ITSN2 1 0.07 0.14 9 5.99 88.08 26 6.69 Yes 39 0.96 Yes 0 0 No -26 0.53 No 44 63.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24534532 - NM_001348181 ITSN2 1 0.26 0.51 28 6.06 84.8 35 6.9 Yes 22 1.13 Yes 34 0.54 Yes -34 0.76 Yes 36 82.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24535234 - NM_001348181 ITSN2 1 0.53 0.61 29 0.93 0 14 4.47 No 58 1.2 Yes 0 0 No -29 0.4 No 41 56.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24538091 - NM_001348181 ITSN2 1 1.45 0.24 14 -14.89 79.36 29 5.09 No 67 0.63 No 0 0 No -31 0.34 No 44 72.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 24538091 - NM_001348181 ITSN2 1 19.51 2.96 67 -14.89 79.36 29 5.09 No 67 0.63 No 0 0 No -31 0.34 No 44 72.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 24538115 - NM_001348181 ITSN2 1 1.77 0.28 17 3.85 71.04 25 5.3 No 43 0.63 No 25 0.45 Yes -24 0.64 No 46 70.06 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 24538115 - NM_001348181 ITSN2 1 3.16 0.46 24 3.85 71.04 25 5.3 No 43 0.63 No 25 0.45 Yes -24 0.64 No 46 70.06 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 24545392 - NM_001348181 ITSN2 1 1.91 0.15 10 4.26 69.69 36 6.48 Yes 23 0.27 No 0 0 No -35 0.9 Yes 35 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24549551 - NM_001348181 ITSN2 1 2.59 0.25 15 10.59 93.12 34 5.88 Yes 50 0.24 No 33 0.51 Yes -33 0.65 No 37 67.69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 24556096 - NM_001348181 ITSN2 1 0.13 0.11 8 8.08 83.97 27 5.19 No 14 1.49 Yes 0 0 No -26 0.89 Yes 44 96.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40698382 + NM_002225 IVD 1 0.39 0.33 18 -2.89 0 29 6.63 Yes 16 2.2 Yes 0 0 No -28 0.9 Yes 42 89.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40705165 + NM_002225 IVD 1 0.7 0.79 38 5.32 78.59 33 4.63 No 49 0.39 No 29 0.93 Yes -32 0.83 Yes 38 85.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40705504 + NM_002225 IVD 1 0.13 0.17 12 4.37 72.54 25 6.63 Yes 12 0.16 No 0 0 No -24 0.9 Yes 46 92.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40707021 + NM_002225 IVD 1 1.01 1.44 46 4.17 70.5 28 5.07 No 32 0.74 No 0 0 No -22 0.62 No 43 77.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40707072 + NM_002225 IVD 1 1.23 1.69 56 6.74 79.54 17 4.62 No 61 -3.56 No 20 0.96 Yes -20 0.48 No 50 57.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 40708458 + NM_002225 IVD 1 0.23 0.19 12 9.19 85.02 27 5.74 Yes 14 0.98 Yes 20 0.97 Yes -26 0.79 Yes 44 87.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40709158 + NM_002225 IVD 1 1.21 1.53 51 4.68 77.15 25 6.19 Yes 75 1.18 Yes 0 0 No -24 0.97 Yes 46 96.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40711378 + NM_002225 IVD 1 0.74 0.93 46 8.82 90.51 29 7.09 Yes 34 -1.56 No 23 0.21 Yes -31 0.46 No 41 43.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 185275758 - NM_006469 IVNS1ABP 1 22.27 33.11 72 9.93 84.93 37 6.74 Yes 24 1.55 Yes 36 0.81 Yes -36 0.88 Yes 34 93.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 128238746 - NM_017969 IWS1 1 0.17 0.25 16 2.78 0 15 3.87 No 2 1.19 Yes 0 0 No -41 0.55 No 44 49.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 128243610 - NM_017969 IWS1 1 0.15 0.22 13 0.96 73.67 38 6.91 Yes 25 1.36 Yes 0 0 No -41 0.84 Yes 29 88.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128250996 - NM_017969 IWS1 1 0.21 0.43 25 -7.28 0 23 5.16 No 10 0.3 No 31 0.83 Yes -22 0.91 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 128253708 - NM_017969 IWS1 1 0.25 0.35 19 4.08 78.23 20 5.1 No 29 0.56 No 0 0 No -41 0.55 No 43 79.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 128253938 - NM_017969 IWS1 1 0.3 0.42 21 4.03 64.84 36 7.18 Yes 23 0.42 No 0 0 No -30 0.72 Yes 40 84.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128258800 - NM_017969 IWS1 1 0.49 0.63 32 3.3 79.01 24 4.97 No 34 0.99 Yes 0 0 No -23 0.71 Yes 47 61.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 128261150 - NM_017969 IWS1 1 3.02 3.22 65 4.76 84.17 27 6.25 Yes 11 0.68 No 0 0 No -26 0.9 Yes 44 87.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2097583 + NM_001039846 IZUMO4 1 2.14 0.88 33 0.1 0 22 4.58 No -2 0.08 No 21 0.89 Yes -21 0.79 Yes 56 31.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 2099013 + NM_001039846 IZUMO4 1 3.21 0.11 7 0.78 69.4 45 6.43 Yes 66 -1.78 No 0 0 No -31 0.43 No 27 40.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 129757633 + NM_001287443 JADE1 1 0.28 0.17 9 3.17 75.49 39 4.77 No 11 0.22 No 0 0 No -35 0.82 Yes 35 76.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 129770170 + NM_001287443 JADE1 1 0.73 0.61 35 3.87 85.39 26 5.39 No 54 1.55 Yes 25 0.89 Yes -25 0.87 Yes 45 83.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 129772709 + NM_001287443 JADE1 1 0.15 0.1 7 6.33 74.52 51 8.18 Yes 54 0.6 No 0 0 No -26 0.53 No 20 63.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 129792564 + NM_001287443 JADE1 1 0.61 0.28 16 7.66 89.07 28 7.96 Yes 75 0.89 Yes 0 0 No -27 0.94 Yes 43 96.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 133872339 + NM_001308143 JADE2 1 0.1 0.18 12 3.78 75.31 28 4.73 No 70 -4.37 No 27 0.84 Yes -24 0.64 No 46 52.69 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 133872394 + NM_001308143 JADE2 1 1 1.6 57 4.25 74.69 25 5.29 No 70 -2.5 No 0 0 No -24 0.75 Yes 45 48.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 133900097 + NM_001308143 JADE2 1 0.14 0.35 17 4.55 65.71 30 5.98 Yes 17 1.11 Yes 0 0 No -29 0.9 Yes 41 94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 133900188 + NM_001308143 JADE2 1 0.07 0.15 9 0.73 0 31 5.74 Yes 18 0.89 Yes 0 0 No -26 0.61 No 44 68.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 133909339 + NM_001308143 JADE2 1 0.09 0.15 11 1.9 0 34 6.05 Yes 25 -0.41 No 0 0 No -33 0.68 Yes 37 67.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 133914186 + NM_001308143 JADE2 1 0.24 0.25 17 8.48 87.96 27 7.87 Yes 14 1.54 Yes 23 0.94 Yes -26 0.97 Yes 44 96.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 133912459 + NM_001308143 JADE2 1 0.08 0.14 9 -13.84 64.08 39 7.12 Yes 26 1.93 Yes 0 0 No -38 0.85 Yes 32 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 133914186 + NM_001308143 JADE2 1 11.07 11.4 72 8.48 87.96 27 7.87 Yes 14 1.54 Yes 23 0.94 Yes -26 0.97 Yes 44 96.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 133914186 + NM_001308143 JADE2 1 38.57 40.75 72 8.48 87.96 27 7.87 Yes 14 1.54 Yes 23 0.94 Yes -26 0.97 Yes 44 96.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 46856125 + NM_001077445 JADE3 1 2.63 0.94 38 6.83 84.04 57 7.03 Yes 59 1.6 Yes 0 0 No -28 0.66 No 42 73.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 10629325 - NM_000214 JAG1 1 0.54 0.15 10 6.21 81.19 37 7.37 Yes 24 0.2 No 0 0 No -36 0.79 Yes 34 90.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 9934492 + NM_032492 JAGN1 1 0.7 0.94 40 8.73 79.81 41 8.23 Yes 28 1.54 Yes 40 0.74 Yes -40 0.88 Yes 30 92.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 65314194 - NM_001321855 JAK1 1 0.12 0.21 11 6.68 87.12 33 7.41 Yes 40 0.93 Yes 0 0 No -32 0.95 Yes 38 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 65321379 - NM_001321855 JAK1 1 3.31 4.67 71 1.64 79.05 46 9.29 Yes 33 2.16 Yes 0 0 No -34 0.73 Yes 36 75.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 65323458 - NM_001321855 JAK1 1 0.19 0.31 17 2.18 0 40 6.78 Yes 27 1.03 Yes 0 0 No -39 0.75 Yes 31 90.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 65330638 - NM_001321855 JAK1 1 0.18 0.33 22 3.19 78.54 24 5.17 No 69 2.26 Yes 0 0 No -23 0.65 No 47 72.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 65332760 - NM_001321855 JAK1 1 0.44 0.92 41 -2.26 75.19 26 5.09 No 43 0.81 Yes 0 0 No -25 0.71 Yes 45 43.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 65332763 - NM_001321855 JAK1 1 0.21 0.43 24 -1.16 74.67 23 4.78 No 40 0.81 Yes 0 0 No -22 0.74 Yes 48 57.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 65335152 - NM_001321855 JAK1 1 0.29 0.56 26 -1.59 0 9 3.87 No 18 1.31 Yes 0 0 No -30 0.93 Yes 40 96.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 65338318 - NM_001321855 JAK1 1 0.53 1.07 42 5.1 86.59 130 9.67 Yes 69 0.97 Yes 0 0 No -29 0.93 Yes 41 90.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 65342157 - NM_001321855 JAK1 1 0.59 0.82 36 8.48 81.13 20 5.18 No 7 1.48 Yes 34 0.66 Yes -29 0.56 No 36 67.49 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 5044429 + NM_001322195 JAK2 1 0.19 0.18 10 6.38 79.24 37 5.97 Yes 40 1.61 Yes 0 0 No -22 0.5 No 48 48.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 5050314 + NM_001322195 JAK2 1 0.39 0.26 12 6.8 74.12 44 6.11 Yes -2 0.69 No 0 0 No -31 0.67 Yes 39 62.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 5085362 + NM_001322195 JAK2 1 0.28 0.17 10 8.41 78.17 35 6.16 Yes 22 0.47 No 0 0 No -34 0.43 No 43 53.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 5100831 + NM_001322195 JAK2 1 0.22 0.18 11 5.29 82 31 7.49 Yes 65 0.73 No 0 0 No -30 0.89 Yes 40 79.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 5100919 + NM_001322195 JAK2 1 0.13 0.11 8 2.33 71.35 42 9.27 Yes 29 1.26 Yes 0 0 No -41 0.81 Yes 29 90.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5110622 + NM_001322195 JAK2 1 0.25 0.22 13 7.49 92.1 23 5.2 No 46 1.03 Yes 0 0 No -22 0.96 Yes 48 97.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17943504 - NM_000215 JAK3 1 0.09 0.14 9 -1.03 69.11 24 3.38 No 20 -0.45 No 0 0 No -37 0.49 No 33 65.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17943534 - NM_000215 JAK3 1 0.1 0.17 11 -2.06 68.54 18 4.9 No 66 -4.18 No 23 0.64 Yes -21 0.85 Yes 49 81.75 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17943668 - NM_000215 JAK3 1 0.38 0.63 32 0.64 61.94 24 6.32 Yes 43 0.67 No 0 0 No -23 0.87 Yes 47 80.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17943968 - NM_000215 JAK3 1 0.94 1.61 52 7.83 77.77 30 4.2 No 10 0.54 No 0 0 No -22 0.95 Yes 48 96.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17945800 - NM_000215 JAK3 1 0.27 0.47 24 6 79.81 16 4.69 No 22 1.82 Yes 0 0 No -34 0.75 Yes 36 78.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17947755 - NM_000215 JAK3 1 0.15 0.19 9 -4.62 0 19 4.24 No 37 1.04 Yes 0 0 No -52 0.61 No 32 75.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17947764 - NM_000215 JAK3 1 1.14 1.21 53 1.39 65.69 44 6.44 Yes 28 1.04 Yes 0 0 No -29 0.71 Yes 41 87.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17948916 - NM_000215 JAK3 1 0.06 0.11 8 5.81 81.94 29 5.17 No 64 0.59 No 33 0.92 Yes -28 0.63 No 42 71.8 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 17950056 - NM_000215 JAK3 1 0.18 0.29 16 4.7 0 14 4.47 No 20 0.3 No 0 0 No -17 0.7 Yes 47 64.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 17950067 - NM_000215 JAK3 1 0.2 0.35 18 4.6 70.97 22 5.28 No 9 0.09 No 0 0 No -21 0.67 Yes 49 80.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17950103 - NM_000215 JAK3 1 2.58 4.15 70 4.99 74.81 25 5 No 43 0.28 No 24 0.73 Yes -24 0.63 No 46 77.45 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 17951495 - NM_000215 JAK3 1 0.09 0.14 9 4.86 89.47 22 6.82 Yes 9 0.47 No 0 0 No -21 0.9 Yes 49 87.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17954322 - NM_000215 JAK3 1 0.38 0.63 31 5.2 90.26 26 5.66 Yes 28 0.9 Yes 28 0.88 Yes -25 0.84 Yes 45 89.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17955188 - NM_000215 JAK3 1 0.24 0.28 16 5.78 79.96 24 5.2 No 76 1.35 Yes 0 0 No -23 0.72 Yes 47 59.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 17955271 - NM_000215 JAK3 1 1.58 1.76 58 5.98 85.48 25 5.27 No 12 0.29 No 24 0.91 Yes -24 0.93 Yes 46 90.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 15505395 + NM_004973 JARID2 1 0.19 0.11 7 5.18 77.15 17 5.09 No 4 0.46 No 28 0.6 Yes -28 0.61 No 42 80.21 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 15509194 + NM_004973 JARID2 1 1.79 0.67 35 4.54 86.34 16 6.36 Yes 53 1.34 Yes 23 0.56 Yes -32 0.4 No 39 49.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 71522991 - NM_144646 JCHAIN 1 0.01 0.58 32 4.45 78.66 21 5.2 No 32 1.34 Yes 0 0 No -44 0.74 Yes 26 92.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 71525100 - NM_144646 JCHAIN 1 0 0.17 10 2.24 80.12 20 7.79 Yes 7 1.16 Yes 0 0 No -31 0.85 Yes 39 89.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 71525103 - NM_144646 JCHAIN 1 0.02 1.72 50 3.6 85.02 17 7.6 Yes 4 1.2 Yes 0 0 No -28 0.93 Yes 42 94.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 71527869 - NM_144646 JCHAIN 1 0.01 0.53 27 7.58 84.01 23 5.35 No 70 0.54 No 0 0 No -22 0.77 Yes 48 65.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 71527924 - NM_144646 JCHAIN 1 0 0.38 17 -6.96 0 13 4.24 No 38 1.79 Yes 0 0 No -50 0.78 Yes 20 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 71527927 - NM_144646 JCHAIN 1 0.02 1.5 48 -5.56 0 10 3.87 No 35 1.8 Yes 0 0 No -47 0.82 Yes 23 89.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 71527932 - NM_144646 JCHAIN 1 0.01 1.01 37 -12.95 0 43 9.08 Yes 30 1.82 Yes 0 0 No -42 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 71527946 - NM_144646 JCHAIN 1 0 0.13 9 -1.25 0 29 8.27 Yes 16 1.84 Yes 41 0.65 Yes -28 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 71531604 - NM_144646 JCHAIN 1 0.17 15.43 71 4.83 70.84 47 5.28 No 30 1.52 Yes 23 0.82 Yes -42 0.36 No 28 68.29 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 71531668 - NM_144646 JCHAIN 1 0.07 6.19 69 5.61 86.1 49 5.62 Yes 36 0.65 No 0 0 No -21 0.5 No 49 44.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75911792 + NM_001135049 JDP2 1 2.67 0.68 32 9.66 92.93 17 6.69 Yes 18 0.18 No 24 0.59 Yes -24 0.55 No 46 64.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 75928132 + NM_001135049 JDP2 1 1.33 0.28 18 2.77 0 29 5.65 Yes 16 0.85 Yes 0 0 No -28 0.93 Yes 42 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 64927870 - NM_001318153 JMJD1C 1 0.35 0.4 22 4.83 84.98 22 5.77 Yes 59 0.36 No 0 0 No -27 0.65 No 43 83.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 64929626 - NM_001318153 JMJD1C 1 0.3 0.24 15 4.38 84.28 36 7.5 Yes 23 1.32 Yes 0 0 No -24 0.76 Yes 46 81.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 64930671 - NM_001318153 JMJD1C 1 0.18 0.15 10 4.3 76.87 58 7.47 Yes -2 1.55 Yes 0 0 No -23 0.37 No 43 40.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 64943324 - NM_001318153 JMJD1C 1 0.11 0.1 7 -1.68 0 15 3.87 No 14 0.18 No 0 0 No -31 0.45 No 39 71.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 64946137 - NM_001318153 JMJD1C 1 0.33 0.21 13 -1.91 0 13 3.96 No 22 1.31 Yes 0 0 No -34 0.81 Yes 36 82.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 64952852 - NM_001318153 JMJD1C 1 1.13 1.13 49 -3.44 0 9 3.87 No 66 0.75 No 0 0 No -38 0.39 No 32 57.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 64952858 - NM_001318153 JMJD1C 1 0.7 0.67 30 -7.25 63.3 27 4.99 No 60 0.75 No 26 0.76 Yes -32 0.39 No 38 56.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 64955087 - NM_001318153 JMJD1C 1 0.23 0.24 13 7.21 84.17 27 5.74 Yes 63 0.41 No 0 0 No -26 0.68 Yes 23 55.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 64955111 - NM_001318153 JMJD1C 1 0.23 0.22 12 4.74 84.41 24 5.48 No 39 0.4 No 0 0 No -23 0.56 No 47 68.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 64962011 - NM_001318153 JMJD1C 1 0.6 0.46 25 7.15 75.57 34 6 Yes 21 1.43 Yes 0 0 No -33 0.85 Yes 37 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 64975378 - NM_001318153 JMJD1C 1 7.05 4.06 72 7.54 82.84 25 5.52 No 3 1.11 Yes 24 0.52 Yes -27 0.68 Yes 43 71.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 64979360 - NM_001318153 JMJD1C 1 0.28 0.19 11 5.61 71.91 32 5.99 Yes 75 1.14 Yes 0 0 No -31 0.75 Yes 39 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 64991551 - NM_001318153 JMJD1C 1 1.26 0.72 35 7.93 86.24 23 5.7 Yes 36 0.41 No 0 0 No -22 0.52 No 35 68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 64995255 - NM_001318153 JMJD1C 1 0.18 0.13 9 2.74 83 29 8.43 Yes 16 1.79 Yes 0 0 No -28 0.71 Yes 42 80.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 65021314 - NM_001318153 JMJD1C 1 1.12 0.69 32 7.93 91.83 41 6.86 Yes 36 1.77 Yes 0 0 No -40 0.79 Yes 30 87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 227920657 - NM_001161465 JMJD4 1 6.93 2.29 61 6.89 80.24 69 8.97 Yes 56 0.78 Yes 0 0 No -30 0.64 No 40 66.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 227921421 - NM_001161465 JMJD4 1 0.23 0.24 15 -7.83 0 14 3.08 No 75 0.65 No 24 0.79 Yes -18 0.63 No 53 20.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 74717434 - NM_001081461 JMJD6 1 0.51 0.43 21 -0.05 0 27 5.74 Yes 30 0.57 No 21 0.9 Yes -26 0.92 Yes 44 94.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 74717439 - NM_001081461 JMJD6 1 3.44 2.58 65 10.54 88.45 22 5.29 No 25 0.59 No 21 0.9 Yes -21 0.92 Yes 49 95.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 74718013 - NM_001081461 JMJD6 1 0.18 0.17 9 -10.1 72.92 27 7.1 Yes 14 1.15 Yes 0 0 No -26 0.82 Yes 44 80.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42120591 + NM_001114632 JMJD7 1 1.51 0.25 15 6.1 76 24 8.82 Yes 11 0.75 No 0 0 No -23 0.8 Yes 47 85.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42121301 + NM_001114632 JMJD7 1 1.14 0.18 12 8.19 89.03 26 6.52 Yes 13 0.69 No 25 0.87 Yes -25 0.8 Yes 45 80.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 733061 - NM_001005920 JMJD8 1 1.02 1.04 42 -0.97 59.05 30 5.97 Yes 37 1.22 Yes 0 0 No -29 0.62 No 41 42.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 733253 - NM_001005920 JMJD8 1 0.68 0.57 32 4.4 75.65 25 5.57 Yes 27 -1.87 No 23 0.96 Yes -24 0.59 No 46 61.34 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 78559238 + NM_152405 JMY 1 0.81 0.18 12 10.86 100 20 5.83 Yes 7 0.64 No 0 0 No -33 0.71 Yes 38 39.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 78608228 + NM_152405 JMY 1 0.89 0.24 12 -0.04 81.85 31 6.22 Yes 59 1.16 Yes 0 0 No -30 0.66 No 40 82.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 78610192 + NM_152405 JMY 1 2.32 0.6 28 2.22 68.09 14 4.54 No 1 1.39 Yes 0 0 No -28 0.69 Yes 51 72.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78610202 + NM_152405 JMY 1 4.06 0.99 46 3.96 0 17 4.36 No 11 1.35 Yes 0 0 No -16 0.54 No 47 71.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 78612023 + NM_152405 JMY 1 1.31 0.19 10 5.04 80.29 20 5.6 Yes 7 0.93 Yes 0 0 No -19 0.64 No 51 60.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39084003 - NM_014876 JOSD1 1 0.12 0.14 9 -1.14 0 30 6.59 Yes 17 0.14 No 0 0 No -29 0.9 Yes 41 86.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 51010946 - NM_001270640 JOSD2 1 0.24 0.11 7 -0.62 0 20 4.41 No 23 0.28 No 0 0 No -35 0.8 Yes 35 92.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 51013706 - NM_001270640 JOSD2 1 505.66 38.29 72 7.16 77.3 29 5.92 Yes 16 0.75 No 28 0.84 Yes -28 0.72 Yes 45 64.89 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 73166833 + NR_024582 JPX 1 98.3 17.67 63 7.38 90.92 28 5.83 Yes 48 0.97 Yes 27 0.81 Yes -27 0.65 No 43 47.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 73182569 + NR_024582 JPX 1 4.12 0.72 33 -0.31 0 27 7.44 Yes 67 1.92 Yes 0 0 No -26 0.33 No 44 42.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 73204278 + NR_024582 JPX 1 7.51 1.43 47 10.11 93.65 23 5.09 No 75 -1.24 No 0 0 No -27 0.68 Yes 43 43.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 153948381 - NM_006694 JTB 1 0.03 0.22 13 -14.62 0 32 8.33 Yes 19 1.64 Yes 0 0 No -31 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 153949399 - NM_006694 JTB 1 0.27 1.21 49 8.32 80.7 31 7.87 Yes 43 -1.7 No 30 0.45 Yes -30 0.52 No 40 59.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 11277619 - NM_001136191 KANK2 1 0.58 0.19 12 6.85 84.93 30 7.13 Yes 63 2.29 Yes 0 0 No -29 0.74 Yes 41 85.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 210940445 - NM_152519 KANSL1L 1 2.75 0.17 11 5.36 87.16 17 4.66 No 44 1.15 Yes 0 0 No -21 0.9 Yes 49 81.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 210951214 - NM_152519 KANSL1L 1 6.21 0.24 12 7.27 86.44 22 4.99 No 53 2.11 Yes 0 0 No -21 0.79 Yes 49 88.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 210962138 - NM_152519 KANSL1L 1 1.85 0.1 7 9.79 90.78 12 5.24 No -1 1.17 Yes 0 0 No -27 0.67 Yes 43 57.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 210994171 - NM_152519 KANSL1L 1 0.75 0.17 10 6.39 78.65 38 8.03 Yes 25 1.17 Yes 0 0 No -37 0.92 Yes 33 93.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 211012176 - NM_152519 KANSL1L 1 1.12 0.17 12 10.61 92.17 33 6.1 Yes 20 0.42 No 0 0 No -32 0.38 No 45 54.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 211015504 - NM_152519 KANSL1L 1 0.66 0.11 8 9.93 85.05 48 6.9 Yes 35 1.84 Yes 0 0 No -47 0.86 Yes 23 88.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 211020129 - NM_152519 KANSL1L 1 2.44 0.24 10 3.46 0 34 5.25 No 21 0.8 Yes 0 0 No -29 0.7 Yes 41 91.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49063052 - NM_017822 KANSL2 1 0.17 0.13 7 -1.66 0 29 8.16 Yes 16 0.93 Yes 25 0.58 Yes -26 0.41 No 42 75.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 49071565 - NM_017822 KANSL2 1 0.44 0.35 22 4.74 84.41 35 7.45 Yes 74 1.37 Yes 0 0 No -34 0.95 Yes 36 96.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49073022 - NM_017822 KANSL2 1 0.16 0.11 7 6.31 76.12 38 6.63 Yes 25 1.43 Yes 37 0.86 Yes -37 0.7 Yes 33 86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49075408 - NM_017822 KANSL2 1 0.75 0.21 13 5.52 80.59 27 5.1 No 37 0.19 No 22 0.81 Yes -26 0.87 Yes 44 68.64 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 49075849 - NM_017822 KANSL2 1 3.11 0.93 34 7.15 93.47 17 4.38 No 40 0.26 No 22 0.91 Yes -22 0.59 No 48 57.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 97263898 - NR_047658 KANSL3 1 3.5 1.75 54 8.74 74.87 27 4.97 No 70 0.8 Yes 25 0.19 Yes -24 0.73 Yes 44 62.36 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 97266241 - NR_047658 KANSL3 1 0.48 0.22 14 11.91 86.68 28 5.66 Yes 15 1.09 Yes 0 0 No -27 0.88 Yes 43 86.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97270595 - NR_047658 KANSL3 1 8.91 4.24 69 2.51 0 10 3.87 No 25 1.1 Yes 31 0.96 Yes -37 0.92 Yes 33 95.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 97271234 - NR_047658 KANSL3 1 0.71 0.39 19 5.05 83.18 18 4.87 No 64 1.04 Yes 0 0 No -24 0.7 Yes 40 56.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 97271275 - NR_047658 KANSL3 1 0.51 0.32 18 -2.24 75.52 36 5.97 Yes 23 1.01 Yes 20 0.89 Yes -35 0.85 Yes 35 94.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 97272785 - NR_047658 KANSL3 1 2.56 1.57 52 8.19 82.86 67 9.33 Yes 9 1.13 Yes 29 0.7 Yes -29 0.85 Yes 41 76.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 97278619 - NR_047658 KANSL3 1 0.52 0.29 18 8.63 86 30 7.66 Yes 17 2.02 Yes 0 0 No -23 0.82 Yes 47 88.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97297258 - NR_047658 KANSL3 1 0.61 0.15 10 0.16 60.15 21 5.21 No 43 0.86 Yes 18 0.26 Yes -29 0.63 No 41 68.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 97297281 - NR_047658 KANSL3 1 34.63 8.28 72 5.93 87.61 24 5.38 No 20 0.87 Yes 23 0.67 Yes -23 0.67 Yes 47 59.5 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 75670442 - NM_005548 KARS 1 0.04 0.24 15 3.86 0 30 5.54 No 36 0.99 Yes 0 0 No -29 0.74 Yes 41 77.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75670442 - NM_005548 KARS 1 0.04 0.24 14 3.86 0 30 5.54 No 36 0.99 Yes 0 0 No -29 0.74 Yes 41 77.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75676734 - NM_005548 KARS 1 0.08 0.33 16 11.55 95.86 42 8.15 Yes 66 1.01 Yes 21 0.27 Yes -39 0.55 No 29 46.32 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 75678361 - NM_005548 KARS 1 15.96 64.64 72 12.96 82 28 8.43 Yes 15 1.52 Yes 27 0.92 Yes -27 0.93 Yes 43 95.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 75679734 - NM_005548 KARS 1 0.37 1.46 50 1.63 0 34 8.75 Yes 21 2.26 Yes 0 0 No -33 0.82 Yes 37 92.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75679738 - NM_005548 KARS 1 0.04 0.13 9 1.38 88.76 30 8.52 Yes 17 2.28 Yes 0 0 No -29 0.84 Yes 41 92.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 18142466 + NR_028402 KAT14 1 0.51 0.18 9 5.91 90.27 27 5.37 No 14 1.22 Yes 23 0.93 Yes -26 0.96 Yes 44 96.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 18160537 + NR_028402 KAT14 1 0.29 0.15 10 1.89 0 31 6.4 Yes 74 1.51 Yes 0 0 No -30 0.93 Yes 40 96.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 18163832 + NR_028402 KAT14 1 0.44 0.26 16 6.52 83.65 25 5.39 No 12 0.28 No 0 0 No -24 0.91 Yes 46 89.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 18164178 + NR_028402 KAT14 1 0.92 0.28 14 10.67 89.68 48 7.13 Yes 35 1.06 Yes 0 0 No -47 0.47 No 23 54.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40265942 - NM_021078 KAT2A 1 0.21 0.15 9 6.04 78.48 74 8.9 Yes 61 0.77 Yes 0 0 No -23 0.4 No 12 65.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40266297 - NM_021078 KAT2A 1 0.2 0.15 10 -1.51 0 28 5.83 Yes 15 0.35 No 0 0 No -27 0.94 Yes 43 92.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40270500 - NM_021078 KAT2A 1 0.38 0.19 11 5.3 80.02 25 5.1 No 29 0.54 No 0 0 No -24 0.83 Yes 46 74.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40271192 - NM_021078 KAT2A 1 0.3 0.15 8 10.85 92.63 31 6.48 Yes 73 1.52 Yes 0 0 No -30 0.9 Yes 40 96.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 20112855 + NM_003884 KAT2B 1 1.38 0.29 17 5.83 86.65 25 6.97 Yes 12 1.27 Yes 0 0 No -24 0.86 Yes 46 92.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 20119909 + NM_003884 KAT2B 1 1.73 0.61 33 9.09 94.46 26 6.17 Yes 13 1.26 Yes 0 0 No -25 0.89 Yes 45 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 20186308 + NM_003884 KAT2B 1 0.42 0.17 9 8.02 85.05 38 7.59 Yes 25 1.9 Yes 0 0 No -31 0.77 Yes 39 75.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 20189417 + NM_003884 KAT2B 1 0.48 0.25 15 1.43 69.3 26 6.14 Yes 13 0.78 Yes 29 0.94 Yes -25 0.88 Yes 45 85.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 20189739 + NM_003884 KAT2B 1 0.48 0.29 17 -0.7 0 40 7.57 Yes 27 1.84 Yes 0 0 No -39 0.86 Yes 31 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 20189868 + NM_003884 KAT2B 1 0.82 0.24 13 4.62 72.36 74 7.95 Yes 34 0.64 No 19 0.69 Yes -20 0.35 No 38 30.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 20189896 + NM_003884 KAT2B 1 0.32 0.1 7 -7.87 75.17 22 6.08 Yes 62 0.66 No 0 0 No -21 0.47 No 49 65.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65480791 + NM_182710 KAT5 1 1.52 0.53 29 -3.01 0 48 6.5 Yes 35 0.23 No 24 0.51 Yes -34 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 65482130 + NM_182710 KAT5 1 1.55 1.67 54 11.43 83.18 31 6 Yes 18 0.35 No 30 0.8 Yes -30 0.88 Yes 40 73.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65484234 + NM_182710 KAT5 1 0.2 0.26 18 5.51 75.31 34 6 Yes 21 0.85 Yes 0 0 No -33 0.6 No 37 49.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 41814699 - NM_006766 KAT6A 1 0.92 0.64 34 3.9 78.08 24 4.85 No 75 -4.36 No 0 0 No -23 0.6 No 47 60.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 41822143 - NM_006766 KAT6A 1 0.17 0.14 10 12.99 95.65 25 6.86 Yes 60 1.06 Yes 0 0 No -24 0.86 Yes 46 78.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 41907226 - NM_006766 KAT6A 1 53.49 14.81 72 9.54 95.19 20 4.95 No 57 1.53 Yes 19 0.58 Yes -19 0.8 Yes 51 83.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 76599008 + NM_001256469 KAT6B 1 0.32 0.15 9 3.97 84.41 30 4.63 No 14 0.3 No 0 0 No -29 0.65 No 41 68.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 76741999 + NM_001256469 KAT6B 1 0.42 0.28 15 6.95 93.6 21 5.68 Yes 19 0.92 Yes 0 0 No -31 0.78 Yes 39 84.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 76743470 + NM_001256469 KAT6B 1 0.28 0.17 10 6.37 89.48 21 5.2 No 41 0.11 No 0 0 No -20 0.59 No 49 50.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 47869299 + NM_007067 KAT7 1 0.17 0.11 7 8.22 90.41 22 5.18 No 44 -2.25 No 0 0 No -26 0.5 No 49 42.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 47893172 + NM_007067 KAT7 1 0.2 0.19 11 -3.04 0 11 4.12 No 17 0.05 No 0 0 No -29 0.75 Yes 41 86.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 47902883 + NM_007067 KAT7 1 0.11 0.1 7 3.44 73.75 13 4.99 No 27 0.47 No 0 0 No -39 0.68 Yes 31 76.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 31141177 + NM_182958 KAT8 1 0.52 0.39 17 10.99 87.24 27 5.66 Yes -4 0.84 Yes 0 0 No -26 0.41 No 45 45.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 31142017 + NM_182958 KAT8 1 0.26 0.18 12 5.93 72.65 50 7.14 Yes 12 1.11 Yes 0 0 No -24 0.92 Yes 46 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31142515 + NM_182958 KAT8 1 0.94 0.6 32 12.31 83.92 31 5.91 Yes 75 -3.02 No 30 0.67 Yes -23 0.74 Yes 40 69.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 149922538 - NM_007044 KATNA1 1 0.15 0.13 8 12.03 92.85 33 5.83 Yes 20 0.43 No 0 0 No -32 0.49 No 38 64.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 149924867 - NM_007044 KATNA1 1 0.45 0.36 22 8.98 80.6 15 5.46 No 67 -1.98 No 0 0 No -32 0.64 No 43 49.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 149937194 - NM_007044 KATNA1 1 2.55 0.58 30 10.78 80.94 25 6.15 Yes 12 1.68 Yes 0 0 No -20 0.61 No 50 69.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 149967296 - NM_007044 KATNA1 1 0.31 0.11 8 9.48 91.63 25 6.15 Yes 12 1.62 Yes 0 0 No -24 0.93 Yes 46 93.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 149967620 - NM_007044 KATNA1 1 0.73 0.18 10 6.55 87.6 31 5.69 Yes 24 0.52 No 0 0 No -31 0.49 No 45 52.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 30785058 - NM_001014380 KATNAL1 1 0.72 0.18 10 6.73 89.86 33 5.95 Yes 20 0.75 No 0 0 No -32 0.71 Yes 38 84.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 30814721 - NM_001014380 KATNAL1 1 1.99 0.44 27 -2.58 53.73 18 4.64 No 70 -5.76 No 25 0.63 Yes -17 0.64 No 53 48.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 30828333 - NM_001014380 KATNAL1 1 2.47 0.28 14 8.01 89.62 38 8.14 Yes 25 0.31 No 0 0 No -38 0.51 No 32 77.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 30848925 - NM_001014380 KATNAL1 1 0.34 0.13 7 4.24 83.89 29 5.92 Yes 16 -0.62 No 0 0 No -28 0.86 Yes 42 86.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57775601 + NM_005886 KATNB1 1 0.37 0.14 8 0.95 69.14 33 7.75 Yes 20 1.86 Yes 0 0 No -32 0.94 Yes 38 92.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57789701 + NM_005886 KATNB1 1 41.61 11.38 72 8.6 86.31 31 7.2 Yes 18 1.42 Yes 30 0.88 Yes -30 0.94 Yes 40 90.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 34434549 - NM_024713 KATNBL1 1 0.19 0.14 8 3.23 89.49 27 5.1 No 40 1.27 Yes 0 0 No -26 0.69 Yes 18 75.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 34435226 - NM_024713 KATNBL1 1 0.74 0.43 24 -0.13 0 23 7.11 Yes 3 0.6 No 22 0.46 Yes -22 0.36 No 40 39.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 34437454 - NM_024713 KATNBL1 1 9.35 5.49 71 7.18 82.36 31 5.9 Yes 25 0.87 Yes 30 0.81 Yes -30 0.71 Yes 40 69.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 34439360 - NM_024713 KATNBL1 1 0.4 0.24 15 9.99 93.27 32 6.47 Yes 75 1.33 Yes 0 0 No -31 0.59 No 39 71.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 34439484 - NM_024713 KATNBL1 1 0.52 0.33 22 3.62 0 15 4 No 13 0.54 No 0 0 No -26 0.65 No 44 65.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 34445033 - NM_024713 KATNBL1 1 0.12 0.14 9 8.74 87.05 27 4.93 No 5 0.94 Yes 0 0 No -26 0.88 Yes 44 94.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 34445175 - NM_024713 KATNBL1 1 1.79 2.15 58 7.8 83.25 29 5.91 Yes 16 0.26 No 0 0 No -28 0.9 Yes 42 92.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 34445266 - NM_024713 KATNBL1 1 1.12 1.35 47 -0.55 0 20 5.38 No 66 0.83 Yes 23 0.85 Yes -28 0.58 No 38 58.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 34458317 - NM_024713 KATNBL1 1 0.43 0.24 14 5.61 81.04 20 5.54 No 7 1.27 Yes 24 0.72 Yes -19 0.72 Yes 51 81.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 34470201 - NM_024713 KATNBL1 1 2.95 1.54 56 5.8 74.08 38 7.22 Yes 25 1.24 Yes 37 0.57 Yes -37 0.73 Yes 33 64.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 34472803 - NM_024713 KATNBL1 1 0.66 0.36 21 -0.16 75.1 16 5.33 No 3 0.08 No 0 0 No -25 0.76 Yes 47 39.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 34472806 - NM_024713 KATNBL1 1 0.42 0.22 11 1.65 63.09 13 5.06 No 0 0.28 No 0 0 No -22 0.63 No 48 53.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 34490533 - NM_024713 KATNBL1 1 0.34 0.18 11 8.87 80.99 30 6.76 Yes 17 0.75 No 29 0.58 Yes -30 0.75 Yes 40 55.21 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 32914436 - NM_015483 KBTBD2 1 4.76 2.17 62 4.87 85.02 17 5.54 No 4 1.4 Yes 0 0 No -24 0.67 Yes 46 80.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 32927704 - NM_015483 KBTBD2 1 1.35 0.32 21 -3.68 0 42 8.04 Yes 29 0.19 No 0 0 No -22 0.74 Yes 34 72.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 32927708 - NM_015483 KBTBD2 1 6.12 1.46 48 2.21 60.63 38 7.79 Yes 25 0.19 No 0 0 No -32 0.54 No 38 77.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 32930762 - NM_015483 KBTBD2 1 1.04 0.22 13 4.91 81.94 19 4.89 No 15 0.8 Yes 0 0 No -27 0.61 No 43 72.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 47597056 - NM_001318721 KBTBD4 1 0.2 0.11 8 4.56 84.41 29 6.31 Yes 16 0.77 No 0 0 No -28 0.88 Yes 42 93.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 85241058 + NM_020122 KCMF1 1 0.64 0.58 32 9.35 95.8 23 4.79 No 56 0.94 Yes 23 0.82 Yes -22 0.66 No 47 69.17 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 85251295 + NM_020122 KCMF1 1 0.13 0.13 9 7.19 75.11 26 6.3 Yes 13 1.3 Yes 0 0 No -25 0.73 Yes 45 74.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85262759 + NM_020122 KCMF1 1 1.08 2.69 65 10.01 84.88 19 5.08 No 30 1.91 Yes 0 0 No -26 0.94 Yes 44 94.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85268552 + NM_020122 KCMF1 1 0.57 1.47 50 12.72 91.21 34 7.8 Yes 21 1.26 Yes 0 0 No -21 0.57 No 30 73.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 85273229 + NM_020122 KCMF1 1 0.17 0.33 19 -14.48 0 57 7.82 Yes 26 0.61 No 0 0 No -17 0.74 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 6054882 + NM_001199861 KCNAB2 1 0.4 0.14 8 8.87 89.66 31 5.66 Yes -3 0.09 No 0 0 No -28 0.6 No 42 53.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 6055922 + NM_001199861 KCNAB2 1 5.28 1.5 49 7.62 83.99 22 5.62 Yes 41 1.31 Yes 21 0.62 Yes -21 0.65 No 38 51.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 6072916 + NM_001199861 KCNAB2 1 0.47 0.13 9 11.86 92.09 25 5.57 Yes 12 0.53 No 0 0 No -24 0.79 Yes 46 89.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6078694 + NM_001199861 KCNAB2 1 10.61 3.06 64 5.37 74.68 22 5.74 Yes 9 1.07 Yes 21 0.7 Yes -21 0.83 Yes 49 92.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 6101227 + NM_001199861 KCNAB2 1 0.51 0.24 15 8.1 85.5 35 8.66 Yes 22 2.24 Yes 34 0.66 Yes -34 0.82 Yes 36 88.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 6111570 + NM_001199861 KCNAB2 1 0.85 0.4 23 4.67 69.85 21 7.82 Yes 8 1.92 Yes 20 0.82 Yes -20 0.8 Yes 50 86.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 6111326 + NM_001199861 KCNAB2 1 0.3 0.15 9 11.04 87.9 19 4.67 No 52 -1.3 No 0 0 No -25 0.92 Yes 45 91.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6111570 + NM_001199861 KCNAB2 1 3.25 1.6 51 4.67 69.85 21 7.82 Yes 8 1.92 Yes 20 0.82 Yes -20 0.8 Yes 50 86.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 6125158 + NM_001199861 KCNAB2 1 0.4 0.21 9 5.76 75.72 31 7.19 Yes 18 1.15 Yes 0 0 No -30 0.55 No 40 78.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 6133413 + NM_001199861 KCNAB2 1 0.08 0.15 10 5.7 79.49 27 7 Yes 14 2.14 Yes 0 0 No -26 0.88 Yes 44 92.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6133416 + NM_001199861 KCNAB2 1 0.12 0.25 14 9.72 89.53 30 7.21 Yes 17 2.12 Yes 0 0 No -29 0.88 Yes 41 91.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6144551 + NM_001199861 KCNAB2 1 0.21 0.47 21 7.44 76.9 35 5.35 No 5 0.86 Yes 0 0 No -23 0.59 No 47 79.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 6145799 + NM_001199861 KCNAB2 1 0.94 2.11 60 10.58 86.67 21 7.04 Yes 72 -3.99 No 25 0.76 Yes -20 0.64 No 50 69.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 6146217 + NM_001199861 KCNAB2 1 0.77 1.65 51 8.35 92.16 23 5.4 No 35 0.91 Yes 23 0.86 Yes -23 0.75 Yes 47 80.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 6149270 + NM_001199861 KCNAB2 1 0.42 0.68 29 9.73 88.22 20 7.87 Yes 7 2.32 Yes 0 0 No -19 0.67 Yes 51 84.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6151322 + NM_001199861 KCNAB2 1 0.87 1.88 59 8.94 92.59 21 6.54 Yes 8 0.49 No 21 0.38 Yes -36 0.48 No 34 79.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 6154461 + NM_001199861 KCNAB2 1 0.06 0.11 8 -7.5 66.54 32 6.1 Yes 36 1.03 Yes 0 0 No -37 0.64 No 39 50.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 6154803 + NM_001199861 KCNAB2 1 0.09 0.18 9 8.24 77.34 22 5.29 No 9 1.32 Yes 0 0 No -21 0.65 No 39 51.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 6155436 + NM_001199861 KCNAB2 1 0.23 0.44 23 5.64 78.87 22 6.21 Yes 9 1.88 Yes 0 0 No -27 0.62 No 43 49.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 6157505 + NM_001199861 KCNAB2 1 0.12 0.22 10 3.64 80.38 21 5.2 No 73 -3.35 No 0 0 No -20 0.58 No 50 42.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154698517 - NM_170782 KCNN3 1 0.13 0.24 15 2.7 0 29 6.13 Yes 32 1.21 Yes 42 0.2 Yes -32 0.49 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 154698932 - NM_170782 KCNN3 1 0.06 0.1 7 11.18 95.68 25 6 Yes 12 1.45 Yes 0 0 No -24 0.87 Yes 46 94.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154707637 - NM_170782 KCNN3 1 0.07 0.11 8 12.01 88.9 29 7.99 Yes 16 1.36 Yes 0 0 No -28 0.76 Yes 42 77.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154709565 - NM_170782 KCNN3 1 15.99 27.03 72 10.19 82.25 35 6.4 Yes 39 0.03 No 0 0 No -32 0.44 No 36 59.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154715832 - NM_170782 KCNN3 1 0.28 0.46 20 8.49 83.85 12 5.74 Yes -1 0.78 Yes 0 0 No -26 0.72 Yes 44 67.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 154720165 - NM_170782 KCNN3 1 0.34 0.56 28 7.01 90.78 29 5.62 Yes 47 1.37 Yes 0 0 No -24 0.81 Yes 46 82.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154725483 - NM_170782 KCNN3 1 0.05 0.1 7 6.72 91.14 11 5.1 No 64 0.1 No 0 0 No -19 0.44 No 51 51.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154741901 - NM_170782 KCNN3 1 0.42 0.57 36 14.42 89.3 28 7.35 Yes 35 -0.68 No 0 0 No -29 0.47 No 48 69.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154742691 - NM_170782 KCNN3 1 0.22 0.39 21 5.59 86.03 9 5.1 No -4 0.63 No 0 0 No -20 0.63 No 50 60.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154753960 - NM_170782 KCNN3 1 0.52 1.4 47 5.56 73.35 40 6.77 Yes 20 0.62 No 0 0 No -32 0.62 No 31 67.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154754100 - NM_170782 KCNN3 1 1.51 4.11 65 6.57 71.7 38 5.54 No 13 0.47 No 0 0 No -25 0.79 Yes 45 80.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154760884 - NM_170782 KCNN3 1 0.08 0.24 11 9.16 86.3 21 4.89 No 72 0.51 No 0 0 No -27 0.84 Yes 43 69.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 154761738 - NM_170782 KCNN3 1 2.97 7.85 66 3.12 74.62 24 3.91 No 17 0.3 No 0 0 No -23 0.84 Yes 47 78.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154766991 - NM_170782 KCNN3 1 0.35 1 37 7.75 91.62 24 5 No 11 0.79 Yes 0 0 No -24 0.84 Yes 46 73.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154769333 - NM_170782 KCNN3 1 0.03 0.11 7 3.46 80.8 66 8.67 Yes 53 0.49 No 0 0 No -27 0.93 Yes 43 87.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154773205 - NM_170782 KCNN3 1 0.31 0.81 33 10.37 92.91 20 5.74 Yes 74 1.68 Yes 0 0 No -19 0.62 No 51 79.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 154776580 - NM_170782 KCNN3 1 0.1 0.25 15 7.8 78.77 28 5.15 No 65 -1 No 0 0 No -27 0.5 No 50 48.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154782495 - NM_170782 KCNN3 1 1.2 3.24 67 6.77 80.11 37 7.41 Yes 7 1.63 Yes 0 0 No -36 0.56 No 34 47.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154802788 - NM_170782 KCNN3 1 0.1 0.21 12 9.93 93.45 30 5.55 No 17 0.55 No 0 0 No -29 0.55 No 46 52.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154824558 - NM_170782 KCNN3 1 0.88 2.28 56 6.06 85.33 29 4.51 No 44 -4.68 No 0 0 No -29 0.56 No 48 56.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154829000 - NM_170782 KCNN3 1 0.39 1.07 37 8.14 81.22 30 6 Yes 17 0.01 No 0 0 No -29 0.85 Yes 41 91.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 44271259 - NM_002250 KCNN4 1 0.2 0.25 17 5.61 80.6 34 13.82 Yes 21 1.97 Yes 22 0.89 Yes -33 0.96 Yes 37 95.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 44271833 - NM_002250 KCNN4 1 0.05 0.1 7 5.79 79.67 19 5.96 Yes 34 1.66 Yes 0 0 No -23 0.64 No 47 58.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44273759 - NM_002250 KCNN4 1 0.64 0.86 41 5.74 83.03 23 4.08 No NA NA NA 0 0 No -22 0.73 Yes 48 74.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 44276256 - NM_002250 KCNN4 1 2.15 2.72 61 3.44 77.81 22 6.08 Yes 38 2.04 Yes 26 0.37 Yes -21 0.82 Yes 49 79.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 44276256 - NM_002250 KCNN4 1 0.32 0.32 20 3.44 77.81 22 6.08 Yes 38 2.04 Yes 26 0.37 Yes -21 0.82 Yes 49 79.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 44276284 - NM_002250 KCNN4 1 2.09 2.65 62 1.69 0 23 6 Yes 10 2.06 Yes 18 0.77 Yes -22 0.8 Yes 48 83.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 44276284 - NM_002250 KCNN4 1 0.33 0.39 18 1.69 0 23 6 Yes 10 2.06 Yes 18 0.77 Yes -22 0.8 Yes 48 83.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 44278052 - NM_002250 KCNN4 1 0.15 0.15 10 8.56 81.6 14 6.56 Yes 1 2.18 Yes 0 0 No -24 0.45 No 32 34.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44280576 - NM_002250 KCNN4 1 0.76 0.83 35 7.72 85.52 21 4.65 No 44 1.61 Yes 0 0 No -20 0.46 No 50 50.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 73724994 + NM_001160130 KCNQ5 1 0.52 0.18 12 7.48 86.65 28 6.16 Yes 27 0.18 No 0 0 No -31 0.83 Yes 39 87.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 73752646 + NM_001160130 KCNQ5 1 0.25 0.11 8 10.79 84.65 41 7.21 Yes 28 1.23 Yes 0 0 No -40 0.77 Yes 30 84.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 73755566 + NM_001160130 KCNQ5 1 1.01 0.43 24 3.49 80.5 20 4.9 No 57 0.91 Yes 0 0 No -19 0.66 Yes 51 73.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 73760457 + NM_001160130 KCNQ5 1 1.01 0.39 22 11 97.18 27 7.73 Yes 14 0.44 No 0 0 No -26 0.61 No 46 71.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 73773610 + NM_001160130 KCNQ5 1 0.26 0.1 7 9.19 96.18 27 5.6 Yes 28 0.55 No 0 0 No -27 0.61 No 43 61.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 73787142 + NM_001160130 KCNQ5 1 0.64 0.28 18 8.85 88.61 22 5 No 32 0.8 Yes 0 0 No -21 0.71 Yes 45 69.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 73816525 + NM_001160130 KCNQ5 1 1.81 0.57 27 5.66 85.79 22 4.62 No 15 1.13 Yes 0 0 No -21 0.87 Yes 49 72.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 73834208 + NM_001160130 KCNQ5 1 2.57 1.06 35 4.61 67.23 44 7.91 Yes 31 1 Yes 35 0.63 Yes -43 0.69 Yes 27 93.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 73885252 + NM_001160130 KCNQ5 1 2.25 0.64 31 12.04 95.81 18 4.6 No 5 1.71 Yes 0 0 No -28 0.53 No 42 61.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 73886223 + NM_001160130 KCNQ5 1 0.88 0.22 12 7.2 91.1 23 5.39 No 36 0.66 No 0 0 No -22 0.86 Yes 48 82.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 73886226 + NM_001160130 KCNQ5 1 1.15 0.26 16 2.79 87.13 26 5.66 Yes 39 0.66 No 0 0 No -25 0.87 Yes 45 80.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 73893553 + NM_001160130 KCNQ5 1 0.35 0.11 7 7.83 87.4 22 6.71 Yes 9 1.98 Yes 0 0 No -21 0.84 Yes 49 91.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 73902236 + NM_001160130 KCNQ5 1 1.46 0.71 35 7.25 78.43 45 7.14 Yes 32 0.88 Yes 0 0 No -44 0.49 No 26 64.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 109891460 - NM_001317395 KCTD10 1 1.66 2.44 62 5.85 86.19 25 8.32 Yes 12 1.38 Yes 0 0 No -25 0.64 No 45 69.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 109892367 - NM_001317395 KCTD10 1 0.09 0.14 10 8.35 91.26 20 7.14 Yes 69 0.85 Yes 0 0 No -28 0.55 No 51 61.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 109895854 - NM_001317395 KCTD10 1 0.83 0.15 11 1.72 0 18 4.55 No 40 0.6 No 21 0.2 Yes -17 0.94 Yes 53 84.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 109895884 - NM_001317395 KCTD10 1 470.14 85.33 72 5.61 91.53 23 5.2 No 10 0.6 No 19 0.9 Yes -22 0.82 Yes 48 76.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 109895884 - NM_001317395 KCTD10 1 1.1 0.19 14 5.61 91.53 23 5.2 No 10 0.6 No 19 0.9 Yes -22 0.82 Yes 48 76.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 109895990 - NM_001317395 KCTD10 1 1.16 0.22 14 7.15 88.04 22 5.29 No 58 0.71 No 21 0.71 Yes -21 0.85 Yes 49 73.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 109907530 - NM_001317395 KCTD10 1 0.28 0.26 15 -7.4 0 37 6.13 Yes 16 1.4 Yes 32 0.76 Yes -31 0.59 No 39 77.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 29917888 - NR_110933 KCTD13 1 6.15 2.43 63 11.62 83.82 25 5.57 Yes 23 -1.26 No 24 0.83 Yes -24 0.8 Yes 46 58.82 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 29919296 - NR_110933 KCTD13 1 0.24 0.1 7 9.91 87 44 10.25 Yes 31 2.21 Yes 0 0 No -43 0.74 Yes 27 87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 29930955 - NR_110933 KCTD13 1 0.44 0.13 7 4.34 81.23 68 7.8 Yes 31 0.76 No 0 0 No -29 0.67 Yes 39 65.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 29933265 - NR_110933 KCTD13 1 0.34 0.14 7 3.57 89.33 25 5 No 68 -0.69 No 0 0 No -24 0.75 Yes 46 69.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 29933283 - NR_110933 KCTD13 1 1.74 0.75 36 2.15 0 33 5.74 Yes 74 0.51 No 0 0 No -26 0.7 Yes 44 90.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 29936903 - NR_110933 KCTD13 1 7.76 2.79 68 5.19 85.59 36 5.21 No 71 1.55 Yes 38 0.53 Yes -42 0.9 Yes 28 92.99 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73056063 + NR_110835 KCTD2 1 0.8 0.51 26 9.82 95.96 26 5.16 No 58 -1.39 No 0 0 No -26 0.51 No 42 50.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36411194 + NM_173562 KCTD20 1 2.82 1.67 56 7.7 93.07 23 3.89 No 2 1.26 Yes 28 0.92 Yes -22 0.45 No 43 57.74 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 36416267 + NM_173562 KCTD20 1 0.62 0.35 14 8.22 97.88 18 6.44 Yes 29 0.78 Yes 0 0 No -30 0.65 No 40 79.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 36419291 + NM_173562 KCTD20 1 0.25 0.15 8 4.88 75.15 21 5.39 No 40 0.41 No 26 0.78 Yes -24 0.8 Yes 41 58.68 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 36419310 + NM_173562 KCTD20 1 2.29 1.36 50 5.64 84.17 27 4.71 No 14 0.54 No 26 0.78 Yes -26 0.78 Yes 44 65.52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 36433377 + NM_173562 KCTD20 1 3.9 2.29 65 8.84 86.38 18 4.9 No 24 0.15 No 22 0.34 Yes -17 0.31 No 53 52.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 36438400 + NM_173562 KCTD20 1 0.05 0.14 9 2.93 83.57 52 5.12 No 39 2.01 Yes 0 0 No -29 0.59 No 41 65.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36438423 + NM_173562 KCTD20 1 0.04 0.11 8 6.87 87.57 14 5.34 No 62 2 Yes 0 0 No -57 0.63 No 18 69.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36439646 + NM_173562 KCTD20 1 0.09 0.25 15 10.52 88.27 37 6.83 Yes 24 1.02 Yes 0 0 No -36 0.67 Yes 46 68.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 36442591 + NM_173562 KCTD20 1 0.04 0.13 8 1.88 79.43 15 4.9 No 7 0.82 Yes 0 0 No -19 0.67 Yes 51 77.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36442697 + NM_173562 KCTD20 1 0.27 0.75 32 7.5 93.59 31 6.38 Yes 72 1.05 Yes 0 0 No -30 0.38 No 49 37.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36442804 + NM_173562 KCTD20 1 0.09 0.25 17 8.02 79.36 10 6.16 Yes 30 1.38 Yes 0 0 No -24 0.59 No 46 79.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 215751271 + NM_001319294 KCTD3 1 4.13 0.88 35 5.62 73.17 46 7.72 Yes 33 1.56 Yes 0 0 No -41 0.49 No 29 83.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 215754314 + NM_001319294 KCTD3 1 1.42 0.36 17 3.15 84.22 24 4.94 No 46 0.78 Yes 23 0.94 Yes -23 0.89 Yes 47 76.91 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 215770133 + NM_001319294 KCTD3 1 1.08 0.18 9 11.33 90.77 25 5.98 Yes 12 0.23 No 0 0 No -24 0.82 Yes 46 74.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 215781367 + NM_001319294 KCTD3 1 0.38 0.15 10 2.99 0 12 4.24 No 32 0.94 Yes 0 0 No -44 0.71 Yes 26 74.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 215791429 + NM_001319294 KCTD3 1 0.88 0.14 10 7.58 87.21 30 7.76 Yes 54 1.21 Yes 29 0.83 Yes -29 0.88 Yes 41 94.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 58479879 + NM_001128214 KCTD6 1 2.1 0.13 7 7.17 83.47 24 4.79 No 49 0.98 Yes 23 0.59 Yes -23 0.62 No 47 45.56 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 58486700 + NM_001128214 KCTD6 1 0.61 0.11 8 4.42 69.31 22 4.89 No 38 1.3 Yes 21 0.98 Yes -21 0.75 Yes 49 87.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 25290170 - NM_017634 KCTD9 1 0.95 0.25 17 1.79 76.21 13 4.64 No 48 0.6 No 24 0.6 Yes -24 0.61 No 46 85.29 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 25292591 - NM_017634 KCTD9 1 0.92 0.24 14 7.46 89.99 33 6.57 Yes 59 -2.92 No 0 0 No -24 0.73 Yes 46 50.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 25293993 - NM_017634 KCTD9 1 0.32 0.14 9 -4.3 0 14 4.24 No 76 1.13 Yes 0 0 No -31 0.61 No 39 77.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 25297309 - NM_017634 KCTD9 1 5.47 3.39 69 7.69 91.91 23 6.88 Yes 10 0.61 No 22 0.95 Yes -22 0.92 Yes 48 91.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 25298409 - NM_017634 KCTD9 1 0.3 0.19 13 12.18 98.09 42 7.52 Yes 37 0.51 No 0 0 No -41 0.53 No 29 67.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 25301823 - NM_017634 KCTD9 1 0.23 0.14 10 5.4 82.84 25 4.59 No 9 0.92 Yes 0 0 No -24 0.71 Yes 46 57.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 25307998 - NM_017634 KCTD9 1 14.11 4.11 67 5.33 71.89 31 6.99 Yes 62 -2.56 No 30 0.74 Yes -30 0.82 Yes 40 82.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 103437467 - NM_001318732 KDELC1 1 1.33 0.29 16 10.42 86.87 24 5.88 Yes 59 -2 No 0 0 No -23 0.63 No 47 51.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108348868 - NM_153705 KDELC2 1 0.79 0.33 18 0.6 0 30 3.39 No 49 1.22 Yes 29 0.71 Yes -29 0.57 No 41 75.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 108368652 - NM_153705 KDELC2 1 0.68 0.19 12 7.62 85.74 34 4.86 No 21 0.03 No 0 0 No -27 0.72 Yes 43 70.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48889262 - NM_006801 KDELR1 1 0.06 0.22 14 4.36 85.84 21 6.59 Yes 62 1.78 Yes 0 0 No -20 0.57 No 50 42.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 48889265 - NM_006801 KDELR1 1 0.03 0.1 7 5.57 82.24 18 6.38 Yes 59 1.78 Yes 0 0 No -26 0.44 No 47 39.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 48890319 - NM_006801 KDELR1 1 0.19 0.71 35 8.66 82.63 31 6.02 Yes 73 -2.31 No 0 0 No -30 0.67 Yes 40 69.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6515050 - NM_001100603 KDELR2 1 0.26 0.97 43 1.45 0 19 7.02 Yes 6 0.45 No 0 0 No -28 0.76 Yes 42 52.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6522221 - NM_001100603 KDELR2 1 0.08 0.38 16 7.22 92.46 26 4.56 No 4 1.16 Yes 25 0.91 Yes -25 0.85 Yes 45 93.51 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 23397019 + NM_015013 KDM1A 1 0.22 0.53 28 2.68 63.98 32 7.76 Yes 64 0.45 No 0 0 No -31 0.52 No 39 66.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 23399766 + NM_015013 KDM1A 1 1.96 4.56 71 4.74 70.17 23 5.74 Yes 10 0.66 No 22 0.65 Yes -26 0.46 No 44 59.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 23408785 + NM_015013 KDM1A 1 0.13 0.26 15 9.52 89.62 40 8.66 Yes 27 0.72 No 0 0 No -39 0.61 No 31 69.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 23408942 + NM_015013 KDM1A 1 5.24 13.1 72 12.21 95.65 21 6.31 Yes 8 1.66 Yes 0 0 No -32 0.87 Yes 38 91.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 18156722 + NM_153042 KDM1B 1 0.89 0.18 12 8.06 70.17 36 6.24 Yes 23 1.21 Yes 0 0 No -35 0.86 Yes 35 92.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 18161468 + NM_153042 KDM1B 1 0.6 0.26 16 8.07 74.57 37 8.29 Yes 24 2.27 Yes 0 0 No -36 0.57 No 34 64.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 18180289 + NM_153042 KDM1B 1 6.14 3.46 63 8.79 87 30 7.79 Yes 17 1.69 Yes 0 0 No -29 0.57 No 41 82.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 18208359 + NM_153042 KDM1B 1 4.52 2.06 61 0.59 73.55 27 6.95 Yes 14 1.55 Yes 26 0.9 Yes -26 0.96 Yes 44 94.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 18218539 + NM_153042 KDM1B 1 0.28 0.11 7 8.82 86.87 23 6.24 Yes 72 1.57 Yes 0 0 No -22 0.93 Yes 48 94.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66888725 + NR_027473 KDM2A 1 0.38 0.35 16 1.95 75.76 31 5.37 No 36 0.75 No 0 0 No -48 0.81 Yes 22 63.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 66888728 + NR_027473 KDM2A 1 0.26 0.24 12 -13.46 72.22 34 5.63 Yes 39 0.74 No 0 0 No -51 0.75 Yes 19 76.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66899422 + NR_027473 KDM2A 1 5.61 5.67 71 12.55 81.77 30 7.53 Yes 17 1.25 Yes 0 0 No -29 0.92 Yes 41 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66902004 + NR_027473 KDM2A 1 0.34 0.35 21 2.37 0 19 4.62 No 60 1.1 Yes 0 0 No -26 0.78 Yes 44 79.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66902559 + NR_027473 KDM2A 1 0.1 0.11 8 1.16 79.51 30 6 Yes 65 1.21 Yes 0 0 No -27 0.57 No 43 74.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 66902584 + NR_027473 KDM2A 1 1.03 1 43 5.33 93.95 28 5.26 No 15 0.84 Yes 0 0 No -27 0.39 No 18 41.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 66910674 + NR_027473 KDM2A 1 0.26 0.26 17 3.6 85.02 17 6.08 Yes 4 1.2 Yes 25 0.47 Yes -25 0.57 No 45 63.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 66916525 + NR_027473 KDM2A 1 0.37 0.38 22 11.15 90.66 20 6.62 Yes 7 0.73 No 28 0.46 Yes -28 0.24 No 42 49.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 66917236 + NR_027473 KDM2A 1 4.46 4.49 70 8.99 88.76 26 5.48 No 13 1.02 Yes 0 0 No -25 0.9 Yes 45 92.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66946789 + NR_027473 KDM2A 1 0.35 0.35 21 5.72 90.92 28 5.28 No 72 0.06 No 0 0 No -27 0.74 Yes 43 58.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 66948314 + NR_027473 KDM2A 1 0.84 0.81 38 6.5 84.24 26 7.55 Yes 13 1.47 Yes 0 0 No -25 0.93 Yes 45 95.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66949301 + NR_027473 KDM2A 1 0.24 0.28 15 0.71 0 36 6.07 Yes 29 0.14 No 19 0.9 Yes -35 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 66953322 + NR_027473 KDM2A 1 6.16 5.69 72 3.45 69.93 67 8.05 Yes 28 1.29 Yes 0 0 No -40 0.82 Yes 30 91.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66953423 + NR_027473 KDM2A 1 0.23 0.21 12 5.4 81.36 32 6.67 Yes 76 1.01 Yes 0 0 No -20 0.46 No 50 43.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 66953438 + NR_027473 KDM2A 1 0.62 0.58 28 5.83 88.91 18 4.86 No 5 0.44 No 0 0 No -21 0.58 No 49 72.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 66953785 + NR_027473 KDM2A 1 0.36 0.33 19 4.84 79.99 26 5.5 No 5 0.16 No 0 0 No -29 0.45 No 41 73.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 66967541 + NR_027473 KDM2A 1 0.15 0.14 10 7.31 86.7 21 5.42 No 44 1.22 Yes 0 0 No -23 0.52 No 47 76.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 66974984 + NR_027473 KDM2A 1 0.16 0.14 8 -19.66 0 27 6.16 Yes 14 0.03 No 0 0 No -26 0.63 No 44 74.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 66985226 + NR_027473 KDM2A 1 3.18 2.82 68 9.35 81.88 30 5.04 No 1 1.11 Yes 29 0.91 Yes -29 0.83 Yes 41 95.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67010977 + NR_027473 KDM2A 1 0.2 0.46 25 5.66 82.11 42 6.45 Yes 37 0.7 No 28 0.86 Yes -28 0.92 Yes 42 89.42 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67016079 + NR_027473 KDM2A 1 0.3 0.53 23 2.91 68.94 36 7.96 Yes 23 0.95 Yes 0 0 No -35 0.79 Yes 35 63.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 121871143 - NM_032590 KDM2B 1 0.31 0.47 22 8.05 91.38 24 4.97 No 11 1.03 Yes 0 0 No -23 0.92 Yes 47 95.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121872299 - NM_032590 KDM2B 1 0.31 0.46 25 7.66 87 31 7.68 Yes 18 1.84 Yes 0 0 No -30 0.85 Yes 40 88.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121876854 - NM_032590 KDM2B 1 0.09 0.14 8 7.42 81.76 39 6.28 Yes 74 1.52 Yes 0 0 No -38 0.56 No 38 68.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 121877914 - NM_032590 KDM2B 1 0.11 0.11 8 2.23 77.76 20 4.8 No 54 0.85 Yes 31 0.93 Yes -19 0.5 No 51 61.75 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 121880574 - NM_032590 KDM2B 1 0.11 0.13 8 1.32 67.74 24 5.2 No 56 -3.25 No 0 0 No -23 0.69 Yes 47 46.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 121883218 - NM_032590 KDM2B 1 0.39 0.31 17 1.14 0 36 8.06 Yes 23 1.66 Yes 0 0 No -35 0.76 Yes 35 82.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121890332 - NM_032590 KDM2B 1 0.16 0.14 9 10.13 89.5 40 7.81 Yes 27 0.37 No 0 0 No -26 0.62 No 44 74.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 121896151 - NM_032590 KDM2B 1 0.23 0.22 12 6.3 89.18 27 5.29 No 59 0.79 Yes 0 0 No -26 0.68 Yes 44 49.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 121928608 - NM_032590 KDM2B 1 0.92 0.83 35 4.15 62.79 25 5.48 No 39 0.82 Yes 0 0 No -25 0.52 No 45 38.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 121928639 - NM_032590 KDM2B 1 0.51 0.4 21 9.12 88.56 40 4.59 No 8 0.85 Yes 0 0 No -33 0.56 No 37 70.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 121954324 - NM_032590 KDM2B 1 5.91 5.35 72 7.04 89.12 33 5.61 Yes 58 -4.81 No 26 0.76 Yes -26 0.61 No 44 79.62 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 121954667 - NM_032590 KDM2B 1 12.01 10.93 72 12.13 100 23 10.72 Yes 10 1.13 Yes 22 0.58 Yes -26 0.68 Yes 44 77.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 121954835 - NM_032590 KDM2B 1 1.57 1.44 52 9.21 79.03 60 5.61 Yes 40 1.2 Yes 0 0 No -30 0.77 Yes 34 79.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121968966 - NM_032590 KDM2B 1 5.27 6.63 71 7.22 84.85 25 4.87 No 2 0.9 Yes 0 0 No -24 0.83 Yes 46 91.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121971163 - NM_032590 KDM2B 1 0.1 0.11 7 8.27 71.44 44 6.13 Yes 31 0.01 No 0 0 No -36 0.7 Yes 34 91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 86670112 + NM_018433 KDM3A 1 4.84 1.57 52 4.4 83.25 25 4.88 No 33 0.75 No 0 0 No -24 0.68 Yes 46 69.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 86687901 + NM_018433 KDM3A 1 5.24 2.63 64 7.88 84.74 28 6.45 Yes 15 0.45 No 27 0.72 Yes -27 0.71 Yes 43 75.62 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 86705004 + NM_018433 KDM3A 1 0.91 0.26 17 1.4 0 24 4.77 No 65 1.97 Yes 0 0 No -27 0.85 Yes 43 87.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86705705 + NM_018433 KDM3A 1 0.32 0.15 11 8.19 83.79 15 5.3 No 2 1.25 Yes 27 0.86 Yes -24 0.72 Yes 46 62.05 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 86707219 + NM_018433 KDM3A 1 0.6 0.22 13 3.46 71.31 55 7.42 Yes 42 0.88 Yes 0 0 No -25 0.81 Yes 45 88.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86716645 + NM_018433 KDM3A 1 0.76 0.33 18 2.3 75.07 30 7.14 Yes 17 1.52 Yes 0 0 No -29 0.93 Yes 41 94.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137690216 + NM_016604 KDM3B 1 1.49 0.67 34 9.44 87.62 28 6.48 Yes 44 1.16 Yes 0 0 No -27 0.93 Yes 43 96.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137715861 + NM_016604 KDM3B 1 0.15 0.14 10 6.93 86.16 20 5.57 Yes 7 1.13 Yes 0 0 No -19 0.68 Yes 51 76.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 137717039 + NM_016604 KDM3B 1 0.17 0.14 9 4.51 75.26 50 7.36 Yes 37 0.83 Yes 0 0 No -28 0.55 No 38 72.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 137727665 + NM_016604 KDM3B 1 0.12 0.11 8 12.7 82.14 27 5.74 Yes 14 0.68 No 0 0 No -26 0.96 Yes 44 96.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 137735550 + NM_016604 KDM3B 1 0.32 0.29 19 -0.94 76.73 36 6.87 Yes 36 -1.66 No 0 0 No -32 0.47 No 38 53.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 137756397 + NM_016604 KDM3B 1 0.32 0.29 16 -2.38 72.83 51 8.23 Yes 38 1.28 Yes 0 0 No -30 0.75 Yes 40 79.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 44119333 + NM_014663 KDM4A 1 5.91 5.08 70 9 85.94 23 6.53 Yes 10 1.82 Yes 22 0.92 Yes -32 0.56 No 38 50.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 44128504 + NM_014663 KDM4A 1 0.5 0.53 28 7.58 80.65 33 4.97 No -4 0.42 No 0 0 No -25 0.82 Yes 45 88.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 44129052 + NM_014663 KDM4A 1 0.1 0.11 7 9.44 97.1 18 6.71 Yes 5 1.24 Yes 0 0 No -28 0.44 No 42 69.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 44136092 + NM_014663 KDM4A 1 1.64 1.07 43 10.2 86.79 20 7.18 Yes 7 0.23 No 0 0 No -25 0.54 No 45 59.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 44154586 + NM_014663 KDM4A 1 0.13 0.1 7 -2.34 77.51 29 5.97 Yes 16 2.37 Yes 0 0 No -24 0.42 No 42 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 44166205 + NM_014663 KDM4A 1 1.07 0.63 28 6.52 83.92 33 6.54 Yes 20 1 Yes 0 0 No -32 0.55 No 38 84.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 44168386 - NR_033827 KDM4A-AS1 1 3.98 0.33 19 -15.21 0 19 4.24 No 48 -2.1 No 0 0 No -18 0.68 Yes 33 52.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 4996022 + NM_015015 KDM4B 1 0.63 0.15 8 11.98 87.15 41 5.84 Yes 28 1.79 Yes 0 0 No -30 0.79 Yes 40 92.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5001067 + NM_015015 KDM4B 1 0.49 0.13 8 2.9 0 31 7.34 Yes 18 1.23 Yes 0 0 No -30 0.65 No 40 71.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 5056437 + NM_015015 KDM4B 1 0.16 0.11 7 4.74 84.41 37 7 Yes 24 0.59 No 0 0 No -36 0.78 Yes 34 89.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 5110692 + NM_015015 KDM4B 1 0.93 0.43 25 6.99 78.94 37 6.47 Yes 69 0.4 No 0 0 No -27 0.76 Yes 43 84.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 5111785 + NM_015015 KDM4B 1 7.65 1.11 50 4.28 82.42 18 6.14 Yes 47 0.89 Yes 28 0.39 Yes -17 0.47 No 53 50.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 5119128 + NM_015015 KDM4B 1 115.1 17.26 72 5.1 75.17 16 6 Yes 3 0.38 No 31 0.21 Yes -31 0.33 No 41 38.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 5121782 + NM_015015 KDM4B 1 0.56 0.21 12 11.18 90.39 26 6.63 Yes 13 1.79 Yes 0 0 No -25 0.94 Yes 45 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5122633 + NM_015015 KDM4B 1 0.57 0.19 12 5.66 77.58 30 6.31 Yes 17 1.05 Yes 0 0 No -29 0.75 Yes 41 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5139283 + NM_015015 KDM4B 1 0.39 0.36 19 0.69 72.1 31 4.85 No 18 0.49 No 0 0 No -30 0.74 Yes 40 88.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 5140262 + NM_015015 KDM4B 1 1.67 1.71 58 10.13 94 24 6.55 Yes 52 -1.63 No 23 0.9 Yes -23 0.91 Yes 47 89.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 5142109 + NM_015015 KDM4B 1 0.47 0.47 23 8.89 91.22 19 5.66 Yes 6 1.93 Yes 0 0 No -25 0.64 No 52 67.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 5145632 + NM_015015 KDM4B 1 0.28 0.26 17 -2.71 47.4 26 6.17 Yes 42 -2.6 No 0 0 No -25 0.63 No 45 30.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 5145645 + NM_015015 KDM4B 1 0.4 0.46 23 -0.08 67.62 18 3.62 No 55 -3.43 No 0 0 No -38 0.33 No 53 18.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 5148926 + NM_015015 KDM4B 1 0.19 0.19 10 5.96 85.05 18 6 Yes 37 -1.67 No 0 0 No -21 0.7 Yes 49 66.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 5148929 + NM_015015 KDM4B 1 0.1 0.11 7 6.58 88.18 21 6.24 Yes 40 -1.67 No 0 0 No -24 0.72 Yes 46 68.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 5149545 + NM_015015 KDM4B 1 0.41 0.44 9 4.8 74.86 29 6.63 Yes 16 0.86 Yes 0 0 No -28 0.89 Yes 42 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5150205 + NM_015015 KDM4B 1 0.1 0.11 7 9.16 95.11 18 5.46 No 5 1.51 Yes 0 0 No -23 0.92 Yes 47 91.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 6805665 + NM_001146696 KDM4C 1 0.34 0.24 12 5.2 88.78 25 4.63 No 6 0.53 No 0 0 No -22 0.49 No 48 75.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 6805929 + NM_001146696 KDM4C 1 0.3 0.24 13 11.51 89.45 27 6.94 Yes 14 1.16 Yes 0 0 No -30 0.67 Yes 40 87.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 6818947 + NM_001146696 KDM4C 1 0.7 0.42 23 8.81 79.14 29 6.3 Yes 16 1.17 Yes 28 0.88 Yes -28 0.82 Yes 42 92.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 6825306 + NM_001146696 KDM4C 1 5.56 3.29 66 1.69 62.67 31 6.7 Yes 40 -3.65 No 0 0 No -30 0.89 Yes 40 92.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 6825483 + NM_001146696 KDM4C 1 0.31 0.17 11 8.69 91.57 33 6.63 Yes 20 1.53 Yes 0 0 No -32 0.8 Yes 38 78.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 6843548 + NM_001146696 KDM4C 1 0.33 0.18 11 10.2 78.49 33 6.07 Yes 48 0.93 Yes 0 0 No -32 0.56 No 38 50.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 6926613 + NM_001146696 KDM4C 1 0.37 0.24 11 7.22 80.1 39 6.29 Yes 26 1.29 Yes 0 0 No -25 0.51 No 45 85.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 6948032 + NM_001146696 KDM4C 1 0.52 0.32 16 11.75 90.97 25 4.34 No 18 0.99 Yes 24 0.76 Yes -24 0.66 No 46 64.2 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 6959490 + NM_001146696 KDM4C 1 0.19 0.13 8 4.92 73.86 28 6.54 Yes 15 1.75 Yes 0 0 No -27 0.96 Yes 43 96.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 6973826 + NM_001146696 KDM4C 1 0.21 0.13 8 7.87 85.81 87 9.91 Yes 64 1.29 Yes 0 0 No -23 0.6 No 47 43.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 6974765 + NM_001146696 KDM4C 1 0.24 0.17 8 9.6 84.88 12 5.1 No 65 0.69 No 30 0.54 Yes -22 0.46 No 48 59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 6981841 + NM_001146696 KDM4C 1 7.83 3.49 66 10.75 94.94 17 8.51 Yes 4 1.12 Yes 26 0.8 Yes -26 0.73 Yes 44 62.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 6982628 + NM_001146696 KDM4C 1 4.02 1.81 60 6.76 79.28 18 4.9 No 30 0.25 No 0 0 No -30 0.51 No 50 46.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 6990419 + NM_001146696 KDM4C 1 1.51 0.81 35 -2.27 0 40 7.14 Yes 27 0.92 Yes 0 0 No -42 0.55 No 31 57.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 7012910 + NM_001146696 KDM4C 1 0.79 0.38 18 3.3 84.71 16 5.25 No 3 0.45 No 0 0 No -24 0.9 Yes 46 91.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 7013791 + NM_001146696 KDM4C 1 1.66 0.82 41 3.21 0 56 7.01 Yes 43 0.75 No 0 0 No -28 0.81 Yes 42 94.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 7013900 + NM_001146696 KDM4C 1 0.39 0.19 11 4.83 85.23 27 5.1 No 14 0.7 No 0 0 No -26 0.81 Yes 44 85.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 7040469 + NM_001146696 KDM4C 1 1.08 0.51 28 6.75 89.42 25 5.4 No 5 0.35 No 0 0 No -24 0.84 Yes 46 81.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 394825 - NM_001042603 KDM5A 1 0.4 0.33 21 0.87 0 37 6.35 Yes 24 1.26 Yes 0 0 No -31 0.34 No 34 71.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 395374 - NM_001042603 KDM5A 1 20.82 16.58 72 6.33 85.28 22 4.76 No -1 1.85 Yes 28 0.71 Yes -28 0.62 No 42 56.32 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 401371 - NM_001042603 KDM5A 1 0.62 0.51 26 6.31 76.36 68 9.36 Yes 55 0.42 No 0 0 No -24 0.74 Yes 46 51.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 404975 - NM_001042603 KDM5A 1 0.16 0.18 11 0.79 0 24 6.04 Yes 11 0.6 No 38 0.62 Yes -23 0.86 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 418729 - NM_001042603 KDM5A 1 0.09 0.13 7 6.12 78.27 17 6.79 Yes 71 -1.51 No 0 0 No -31 0.59 No 39 75.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 420229 - NM_001042603 KDM5A 1 0.11 0.13 9 -10.67 76.71 25 5.54 No 62 -3.01 No 0 0 No -24 0.74 Yes 46 73.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 422086 - NM_001042603 KDM5A 1 0.1 0.11 8 5.78 81.45 26 5.29 No 69 0.87 Yes 0 0 No -25 0.83 Yes 45 88.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 430272 - NM_001042603 KDM5A 1 0.09 0.13 7 -1.03 0 48 6.68 Yes 35 1.18 Yes 0 0 No -29 0.53 No 41 75.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 441097 - NM_001042603 KDM5A 1 1.29 1.46 51 0.26 0 11 4.12 No 68 1.49 Yes 0 0 No -54 0.5 No 16 73.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 442418 - NM_001042603 KDM5A 1 0.12 0.13 7 6.18 86.16 20 6.93 Yes 7 0.91 Yes 0 0 No -19 0.85 Yes 51 95.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 477026 - NM_001042603 KDM5A 1 0.11 0.13 8 4.19 0 31 5.74 Yes 30 1.34 Yes 0 0 No -30 0.67 Yes 40 67.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 485891 - NM_001042603 KDM5A 1 0.14 0.19 11 6.32 65.86 14 5.46 No 11 -2.85 No 0 0 No -23 0.87 Yes 47 92.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 486623 - NM_001042603 KDM5A 1 0.44 0.63 29 8.16 93.84 30 5.22 No 32 1.33 Yes 0 0 No -22 0.84 Yes 48 73.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 486649 - NM_001042603 KDM5A 1 0.17 0.24 13 8.47 85.05 36 6.63 Yes 6 1.36 Yes 0 0 No -35 0.72 Yes 35 79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 489424 - NM_001042603 KDM5A 1 0.15 0.21 15 2.11 84.41 39 5.01 No 26 0.72 No 0 0 No -27 0.37 No 43 43.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 494344 - NM_001042603 KDM5A 1 0.32 0.33 17 10.91 95.65 32 6.52 Yes 61 1.17 Yes 0 0 No -27 0.51 No 43 66.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 495846 - NM_001042603 KDM5A 1 0.21 0.14 8 11.48 87.72 29 8.7 Yes 16 1.11 Yes 0 0 No -28 0.75 Yes 42 70.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 496432 - NM_001042603 KDM5A 1 0.22 0.14 8 1.52 0 17 4.22 No 61 1.11 Yes 0 0 No -28 0.59 No 40 72.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 496441 - NM_001042603 KDM5A 1 0.33 0.25 15 2.13 68.63 22 4.57 No 52 1.12 Yes 21 0.84 Yes -21 0.75 Yes 49 76.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 496454 - NM_001042603 KDM5A 1 0.33 0.26 16 5.59 81.81 52 7.75 Yes 39 1.11 Yes 21 0.84 Yes -24 0.8 Yes 46 44.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 53223783 - NM_001146702 KDM5C 1 0.06 0.11 7 9.61 76.33 47 6.98 Yes 34 -0.56 No 0 0 No -25 0.9 Yes 45 79.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53226025 - NM_001146702 KDM5C 1 0.28 0.29 16 2.49 75.85 23 5.35 No 63 -3.03 No 0 0 No -22 0.53 No 48 35.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 53239964 - NM_001146702 KDM5C 1 0.1 0.18 11 6.39 73.14 13 5.83 Yes 73 -3.82 No 0 0 No -30 0.77 Yes 40 67.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 53240049 - NM_001146702 KDM5C 1 0.11 0.19 10 -4.87 0 29 6.06 Yes 10 1.63 Yes 31 0.87 Yes -22 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 53243449 - NM_001146702 KDM5C 1 0.17 0.31 14 12.74 87.72 34 6.32 Yes 21 1.43 Yes 0 0 No -33 0.9 Yes 37 88.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 53245178 - NM_001146702 KDM5C 1 0.18 0.25 16 4.43 82.16 17 4.8 No 12 0.62 No 23 0.92 Yes -24 0.86 Yes 46 83.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 53246457 - NM_001146702 KDM5C 1 22.91 42.65 72 5.34 80.63 29 6.82 Yes 16 2.37 Yes 25 0.96 Yes -28 0.65 No 42 85.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 44835896 + NM_001291421 KDM6A 1 6.29 4.47 71 9.24 93.95 47 4.6 No 6 0.72 No 0 0 No -39 0.52 No 34 52.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 44929364 + NM_001291421 KDM6A 1 0.16 0.11 8 5.32 83.67 31 6.01 Yes 15 1.49 Yes 0 0 No -30 0.74 Yes 40 82.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 44940222 + NM_001291421 KDM6A 1 0.18 0.13 8 5.5 90.92 28 5.29 No 71 -2.88 No 0 0 No -27 0.79 Yes 43 61.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 44942766 + NM_001291421 KDM6A 1 0.12 0.14 10 7.12 82.82 38 6.66 Yes 21 1.29 Yes 0 0 No -37 0.61 No 33 77.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 44965786 + NM_001291421 KDM6A 1 7.25 3.04 65 11.15 88.87 22 5.92 Yes 9 1.64 Yes 29 0.74 Yes -29 0.61 No 41 69.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 44966716 + NM_001291421 KDM6A 1 0.37 0.15 8 5.37 91.84 23 4.9 No 68 0.38 No 0 0 No -22 0.93 Yes 48 86.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7754792 + NM_001080424 KDM6B 1 1.41 0.76 41 7.6 82.3 21 8.82 Yes NA NA NA 27 0.7 Yes -21 0.47 No 50 65.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 27222466 + NM_001145348 KDM8 1 18.04 0.72 31 6.93 87.56 35 7.14 Yes 22 1.01 Yes 34 0.83 Yes -34 0.96 Yes 36 92.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 61002588 - NM_002035 KDSR 1 0.2 0.13 8 1.16 0 45 6.93 Yes 47 1.15 Yes 0 0 No -41 0.71 Yes 29 83.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 61033908 - NM_002035 KDSR 1 0.59 0.17 10 8.01 88.78 33 8.17 Yes 30 -1.08 No 30 0.43 Yes -30 0.77 Yes 40 76.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10597492 - NM_203500 KEAP1 1 0.06 0.15 11 -8.32 78.12 29 6.04 Yes 16 1.83 Yes 0 0 No -28 0.91 Yes 42 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32498791 + NR_073499 KHDRBS1 1 0.03 0.22 12 -5.48 84.25 28 6.86 Yes 15 1.24 Yes 0 0 No -27 0.93 Yes 43 95.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32499632 + NR_073499 KHDRBS1 1 0.01 0.11 7 8.2 85.11 32 5.86 Yes 29 -1.37 No 0 0 No -31 0.36 No 42 37.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32505123 + NR_073499 KHDRBS1 1 0.04 0.22 15 -2.47 0 11 4.12 No 18 1.97 Yes 0 0 No -30 0.92 Yes 40 93.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24899688 + NM_015299 KHNYN 1 2.09 0.71 34 4.85 74.43 15 7.4 Yes 2 0.56 No 0 0 No -23 0.5 No 47 75.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 24899693 + NM_015299 KHNYN 1 0.34 0.11 8 -0.33 0 20 7.72 Yes 7 0.51 No 0 0 No -28 0.45 No 42 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 24899710 + NM_015299 KHNYN 1 0.39 0.1 7 4 73.03 26 4.98 No 24 0.51 No 0 0 No -17 0.26 No 25 39.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24902143 + NM_015299 KHNYN 1 0.07 0.13 7 -7.87 80.52 34 4.96 No 7 0.09 No 0 0 No -19 0.43 No 48 46.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24903305 + NM_015299 KHNYN 1 0.95 0.82 33 6.72 79.26 34 6.65 Yes 69 1.41 Yes 0 0 No -33 0.51 No 37 77.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 24905273 + NM_015299 KHNYN 1 1.85 1.63 61 -3.06 74.69 38 6.99 Yes 25 0.71 No 30 0.6 Yes -37 0.59 No 33 83.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 6413625 - NM_003685 KHSRP 1 0.49 0.17 11 8.81 84.45 25 5.92 Yes 12 0.88 Yes 0 0 No -24 0.94 Yes 46 91.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6413750 - NM_003685 KHSRP 1 3.19 1.26 44 6.56 84.41 27 5.47 No -3 1.04 Yes 26 0.83 Yes -26 0.77 Yes 44 79.99 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 6415464 - NM_003685 KHSRP 1 0.11 0.28 17 -4.94 0 28 6.71 Yes 15 0.17 No 22 0.92 Yes -27 0.86 Yes 43 82.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 6417051 - NM_003685 KHSRP 1 0.05 0.46 22 3.73 67.59 19 4.95 No 71 0.53 No 0 0 No -18 0.8 Yes 52 74.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 6418886 - NM_003685 KHSRP 1 0.02 0.17 10 -17.58 0 27 7.07 Yes 14 1.71 Yes 0 0 No -26 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 6419268 - NM_003685 KHSRP 1 0.06 0.6 28 3.44 0 25 6.32 Yes 12 2.33 Yes 0 0 No -24 0.9 Yes 46 91.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 175158375 - NM_001319231 KIAA0040 1 0.17 0.11 7 9.3 83.11 39 7.24 Yes 26 0.67 No 0 0 No -28 0.55 No 42 77.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 26943722 - NM_001321560 KIAA0100 1 0.1 0.26 14 3.76 0 21 4.47 No 8 1.45 Yes 0 0 No -20 0.86 Yes 50 93.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26943722 - NM_001321560 KIAA0100 1 0.06 0.18 11 3.76 0 21 4.47 No 8 1.45 Yes 0 0 No -20 0.86 Yes 50 93.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26946785 - NM_001321560 KIAA0100 1 0.35 0.65 32 3.34 0 12 4.24 No 19 0.98 Yes 0 0 No -31 0.93 Yes 39 95.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26947592 - NM_001321560 KIAA0100 1 0.44 1.11 44 0.27 74.79 25 5.51 No 28 1.23 Yes 0 0 No -30 0.5 No 46 51.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 26947667 - NM_001321560 KIAA0100 1 0.07 0.19 11 1.28 0 15 4.58 No 2 0.24 No 24 0.83 Yes -14 0.46 No 56 30.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 26958700 - NM_001321560 KIAA0100 1 3293.83 242.85 72 7.13 86.77 32 6.16 Yes 70 1.05 Yes 31 0.77 Yes -28 0.89 Yes 42 93.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 26960123 - NM_001321560 KIAA0100 1 0.2 0.6 27 0.98 74.19 54 8.13 Yes 23 1.18 Yes 0 0 No -26 0.7 Yes 44 85.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26960185 - NM_001321560 KIAA0100 1 1.07 2.89 65 -3.05 72.36 23 5.39 No 69 -5.71 No 26 0.87 Yes -22 0.93 Yes 48 71.77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 26960348 - NM_001321560 KIAA0100 1 0.31 0.86 35 0.81 58.03 30 6.32 Yes 64 -2.44 No 29 0.64 Yes -33 0.56 No 37 69.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 26963183 - NM_001321560 KIAA0100 1 0.3 0.74 29 7.46 75.24 21 5.22 No 61 0.4 No 0 0 No -35 0.64 No 35 43.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 26965032 - NM_001321560 KIAA0100 1 0.07 0.17 11 -0.93 0 16 4.12 No 11 -1.16 No 0 0 No -40 0.71 Yes 30 63.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 26965040 - NM_001321560 KIAA0100 1 0.05 0.13 7 3.73 78.55 33 6.23 Yes 51 -0.76 No 0 0 No -32 0.78 Yes 38 69.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 26965108 - NM_001321560 KIAA0100 1 0.28 0.67 33 2.88 0 32 8.54 Yes 19 1.46 Yes 0 0 No -31 0.83 Yes 39 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26967646 - NM_001321560 KIAA0100 1 0.2 0.49 24 5.91 84.82 31 4.55 No 67 1.03 Yes 31 0.31 Yes -30 0.52 No 30 52.32 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 26967649 - NM_001321560 KIAA0100 1 0.37 0.96 36 7.44 89.04 28 4.38 No 64 1.03 Yes 31 0.31 Yes -27 0.56 No 33 55.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 26967700 - NM_001321560 KIAA0100 1 0.08 0.19 13 -2.4 81.54 35 6.03 Yes 13 1.04 Yes 0 0 No -25 0.95 Yes 45 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26969094 - NM_001321560 KIAA0100 1 0.31 0.92 45 -9.44 68.97 17 5.04 No 46 0.4 No 25 0.19 Yes -24 0.83 Yes 46 40.78 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 26969116 - NM_001321560 KIAA0100 1 0.25 0.83 36 6.56 67.33 37 5.69 Yes 24 0.41 No 21 0.93 Yes -36 0.45 No 34 80.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 26970245 - NM_001321560 KIAA0100 1 1.74 4.96 70 8.48 82.08 24 6.16 Yes 11 2.31 Yes 0 0 No -23 0.85 Yes 47 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26971220 - NM_001321560 KIAA0100 1 0.39 0.43 21 5.12 78.53 10 5.09 No 71 -5.99 No 18 0.9 Yes -23 0.78 Yes 47 55.41 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 141304979 + NM_014773 KIAA0141 1 0.08 0.11 8 1.11 0 30 5.83 Yes 59 0.5 No 0 0 No -29 0.78 Yes 41 85.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 141309721 + NM_014773 KIAA0141 1 0.1 0.1 7 -7.05 63.9 18 6.39 Yes 36 1.06 Yes 23 0.8 Yes -27 0.57 No 44 44.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 141310515 + NM_014773 KIAA0141 1 1.51 1.21 46 4.41 84.67 20 4.68 No 7 0.68 No 0 0 No -19 0.72 Yes 51 83.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 141316418 + NM_014773 KIAA0141 1 0.87 0.35 19 11.17 92.24 32 6.46 Yes 68 -2.51 No 0 0 No -24 0.72 Yes 46 85.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 141319070 + NM_014773 KIAA0141 1 0.34 0.17 10 4.25 79.46 34 6.36 Yes 46 1.46 Yes 33 0.9 Yes -33 0.85 Yes 37 95.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 6831771 + NM_014743 KIAA0232 1 1.05 0.61 31 6.39 83.2 30 6.46 Yes 17 1.11 Yes 0 0 No -25 0.66 No 45 62.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 6860154 + NM_014743 KIAA0232 1 0.45 0.1 7 -1.08 67.88 22 6.38 Yes 9 0.36 No 0 0 No -35 0.21 No 35 51.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 6862743 + NM_014743 KIAA0232 1 0.32 0.17 9 9.15 83.48 28 5.39 No 15 1.21 Yes 0 0 No -27 0.94 Yes 43 95.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 6867918 + NM_014743 KIAA0232 1 11.4 5.36 71 6.8 81.11 40 6.27 Yes 76 0.75 No 0 0 No -46 0.41 No 30 54.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 6882532 + NM_014743 KIAA0232 1 0.9 0.44 25 2.97 78.78 27 5.28 No 63 0.26 No 0 0 No -26 0.86 Yes 44 92.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 35900987 - NM_024874 KIAA0319L 1 0.43 0.22 14 2.72 68.93 24 5.75 Yes 63 1.03 Yes 0 0 No -23 0.56 No 47 37.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 35901199 - NM_024874 KIAA0319L 1 1.05 0.6 31 4.28 73.27 16 4.2 No 61 0.61 No 27 0.48 Yes -26 0.65 No 44 59.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 35908937 - NM_024874 KIAA0319L 1 0.5 0.38 19 5.37 75.32 26 5.94 Yes 13 0.25 No 25 0.85 Yes -25 0.46 No 45 57.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 35912835 - NM_024874 KIAA0319L 1 0.81 0.54 28 8.23 85.05 30 5.81 Yes 17 0.95 Yes 0 0 No -30 0.48 No 38 43.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 35917393 - NM_024874 KIAA0319L 1 0.73 0.4 21 2.71 75.68 15 5.29 No 59 0.64 No 24 0.56 Yes -25 0.64 No 49 46.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 35920898 - NM_024874 KIAA0319L 1 0.17 0.13 9 4.54 90.68 22 4.87 No 13 1.26 Yes 0 0 No -21 0.73 Yes 49 70.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35926035 - NM_024874 KIAA0319L 1 0.72 0.47 24 -5.27 0 24 6.2 Yes 11 1.46 Yes 31 0.86 Yes -35 0.71 Yes 35 69.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 35930530 - NM_024874 KIAA0319L 1 1.98 1.75 52 9.91 90.07 19 6.15 Yes 6 0.99 Yes 0 0 No -26 0.85 Yes 44 89.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35944831 - NM_024874 KIAA0319L 1 0.17 0.11 8 4.46 63.69 39 6.15 Yes 9 1.15 Yes 24 0.85 Yes -26 0.42 No 37 42.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 35991725 - NM_024874 KIAA0319L 1 0.21 0.13 9 2.37 86.74 23 5.19 No -1 0.33 No 0 0 No -22 0.9 Yes 48 86.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36004185 - NM_024874 KIAA0319L 1 1.36 0.76 35 3.01 0 40 7.14 Yes 27 2.17 Yes 0 0 No -39 0.77 Yes 31 92.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 34776054 + NM_014686 KIAA0355 1 4.38 0.4 20 8.51 86.34 16 7.07 Yes 3 0.03 No 21 0.27 Yes -21 0.82 Yes 49 88.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 34839764 + NM_014686 KIAA0355 1 9.85 0.81 36 0.55 69.53 28 6.1 Yes 15 0.01 No 0 0 No -27 0.89 Yes 43 81.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 114124413 - NM_001080398 KIAA0368 1 0.12 0.21 12 3.66 73.44 32 5.88 Yes 31 -2.37 No 0 0 No -31 0.78 Yes 39 46.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 114124439 - NM_001080398 KIAA0368 1 0.05 0.1 7 -1.26 0 18 4.47 No 5 -0.74 No 0 0 No -17 0.7 Yes 15 19.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 114125579 - NM_001080398 KIAA0368 1 4.67 7.71 71 7.26 87.5 53 7.07 Yes 37 0.32 No 0 0 No -22 0.58 No 48 66.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 114134922 - NM_001080398 KIAA0368 1 0.07 0.18 11 -1.52 64.06 29 5.6 Yes 74 0.59 No 24 0.74 Yes -22 0.6 No 48 58.13 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 114151908 - NM_001080398 KIAA0368 1 0.12 0.28 15 4.05 83.64 30 5.54 No 17 1.11 Yes 0 0 No -25 0.62 No 45 73.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 114152378 - NM_001080398 KIAA0368 1 0.47 0.81 36 3.09 0 35 6.86 Yes 58 0.52 No 0 0 No -34 0.5 No 43 67.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 114153859 - NM_001080398 KIAA0368 1 0.08 0.14 8 4.56 84.41 24 6 Yes 11 1.96 Yes 0 0 No -23 0.94 Yes 47 93.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 114173421 - NM_001080398 KIAA0368 1 0.06 0.13 7 -5.36 64.94 34 5.9 Yes -3 0.25 No 0 0 No -22 0.63 No 48 70.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 114177459 - NM_001080398 KIAA0368 1 0.13 0.28 15 10.31 83.28 14 6.41 Yes 1 1.02 Yes 0 0 No -26 0.62 No 44 53.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 114178164 - NM_001080398 KIAA0368 1 0.11 0.18 11 5.3 83.59 25 4.65 No 54 -3.87 No 0 0 No -24 0.72 Yes 46 87.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 114193831 - NM_001080398 KIAA0368 1 0.05 0.11 7 3.24 0 38 6.72 Yes 25 0.89 Yes 0 0 No -33 0.49 No 37 73.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 114199416 - NM_001080398 KIAA0368 1 0.03 0.1 7 4.83 87.44 20 5.74 Yes 7 0.62 No 21 0.74 Yes -26 0.57 No 44 63.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 114202737 - NM_001080398 KIAA0368 1 0.99 2.17 64 1.05 64.17 62 7.2 Yes 49 0.89 Yes 0 0 No -33 0.8 Yes 37 63.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 114209237 - NM_001080398 KIAA0368 1 0.08 0.17 10 6.14 76.58 23 6.32 Yes 10 1.48 Yes 0 0 No -22 0.78 Yes 48 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 114235281 - NM_001080398 KIAA0368 1 10.32 0.65 32 4.59 67.38 31 7.68 Yes 18 0.72 No 30 0.72 Yes -30 0.9 Yes 40 81.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 35592710 + NM_001256680 KIAA0391 1 13.2 0.71 35 9 84.61 13 4.9 No 0 0.85 Yes 24 0.8 Yes -24 0.63 No 46 57.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 35656652 + NM_001256680 KIAA0391 1 0.14 0.17 10 11.77 88.27 24 5.92 Yes 76 0.29 No 0 0 No -33 0.73 Yes 37 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 35660507 + NM_001256680 KIAA0391 1 0.3 0.38 22 -1.34 60.08 37 6.25 Yes 51 1.18 Yes 0 0 No -36 0.65 No 34 85.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 35675831 + NM_001256680 KIAA0391 1 0.2 0.25 13 2.97 73.91 31 7.56 Yes 18 1.86 Yes 0 0 No -30 0.89 Yes 40 94.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35708866 + NM_001256680 KIAA0391 1 0.29 0.36 14 6.74 86 26 6.74 Yes 13 0.58 No 0 0 No -25 0.68 Yes 45 76.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 35717770 + NM_001256680 KIAA0391 1 0.08 0.11 8 4.92 75.08 29 4.49 No 9 0.79 Yes 0 0 No -24 0.32 No 46 54.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 35717773 + NM_001256680 KIAA0391 1 0.12 0.15 10 6.48 78.67 32 4.63 No 12 0.78 Yes 0 0 No -27 0.33 No 43 58.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 15692110 - NM_001184999 KIAA0430 1 0.46 0.22 14 7.88 92.59 24 5 No 66 0.9 Yes 0 0 No -23 0.66 No 47 47.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 15692975 - NM_001184999 KIAA0430 1 0.55 0.25 14 9.08 84.6 18 6.74 Yes 5 1.36 Yes 29 0.69 Yes -29 0.39 No 34 32.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 15698184 - NM_001184999 KIAA0430 1 0.12 0.11 8 6.73 80.61 34 4.36 No -3 0.76 No 0 0 No -33 0.51 No 38 71.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 15698897 - NM_001184999 KIAA0430 1 0.14 0.13 7 8.81 84.56 24 5.83 Yes 11 0.72 No 0 0 No -23 0.91 Yes 47 92.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 15710971 - NM_001184999 KIAA0430 1 0.61 0.32 16 6.02 83.92 33 5.11 No 3 0.84 Yes 0 0 No -32 0.87 Yes 38 97.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15714384 - NM_001184999 KIAA0430 1 0.5 0.29 18 4.15 0 26 7.19 Yes 13 1.19 Yes 0 0 No -25 0.88 Yes 45 94.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15716915 - NM_001184999 KIAA0430 1 0.37 0.11 8 0.29 63.9 45 6.73 Yes 32 0.01 No 20 0.23 Yes -20 0.44 No 26 65.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 15716954 - NM_001184999 KIAA0430 1 32.52 9.03 72 6.41 75.76 33 5.59 Yes 40 0.31 No 32 0.49 Yes -32 0.74 Yes 38 73.74 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15716984 - NM_001184999 KIAA0430 1 36.48 10.25 72 3.87 71.04 23 6.47 Yes 10 0.31 No 27 0.48 Yes -28 0.43 No 43 52.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 15716984 - NM_001184999 KIAA0430 1 0.53 0.14 9 3.87 71.04 23 6.47 Yes 10 0.31 No 27 0.48 Yes -28 0.43 No 43 52.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 15719655 - NM_001184999 KIAA0430 1 33.57 14.14 72 5.32 80.9 31 6.75 Yes 18 1.56 Yes 27 0.86 Yes -25 0.71 Yes 45 75.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15719655 - NM_001184999 KIAA0430 1 0.78 0.31 21 5.32 80.9 31 6.75 Yes 18 1.56 Yes 27 0.86 Yes -25 0.71 Yes 45 75.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15728677 - NM_001184999 KIAA0430 1 0.27 0.17 10 -1.98 65.98 49 9.25 Yes 36 1.14 Yes 0 0 No -48 0.86 Yes 22 90.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15730196 - NM_001184999 KIAA0430 1 0.51 0.39 20 -2.38 0 32 7.41 Yes 7 1.23 Yes 0 0 No -31 0.67 Yes 39 76.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85114042 + NM_001286565 KIAA0513 1 3.18 0.17 10 5.06 86.39 16 6.37 Yes 3 0.53 No 0 0 No -19 0.56 No 51 56.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 27562069 + NM_015202 KIAA0556 1 1.44 0.17 11 9.13 88.48 26 4.52 No 33 1.03 Yes 0 0 No -20 0.7 Yes 50 84.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27564842 + NM_015202 KIAA0556 1 4.14 0.44 22 4.41 84.33 77 9.04 Yes 64 1.22 Yes 0 0 No -36 0.41 No 34 57.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 27650184 + NM_015202 KIAA0556 1 2.5 0.32 20 5.6 0 64 9.54 Yes 51 1.73 Yes 0 0 No -29 0.83 Yes 41 86.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27694211 + NM_015202 KIAA0556 1 4.74 0.88 37 6.21 79.77 28 5.39 No 72 -4.8 No 0 0 No -27 0.85 Yes 43 69.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 27710800 + NM_015202 KIAA0556 1 3.69 0.46 25 7.8 82.48 46 5.32 No 68 2.22 Yes 0 0 No -33 0.64 No 54 53.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 27730883 + NM_015202 KIAA0556 1 0.83 0.14 8 7.94 85.86 27 7.47 Yes 14 1.08 Yes 0 0 No -26 0.68 Yes 44 73.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27731856 + NM_015202 KIAA0556 1 0.56 0.1 7 2.96 73.95 58 7.58 Yes 64 0.67 No 0 0 No -55 0.8 Yes 15 88.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 27786253 + NM_015202 KIAA0556 1 1.11 0.13 8 -0.39 66.48 31 5.42 No 43 -3.61 No 19 0.62 Yes -27 0.67 Yes 43 52.09 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 27788820 + NM_015202 KIAA0556 1 5.41 0.19 8 5.02 86.95 26 4.47 No 71 1.29 Yes 0 0 No -26 0.55 No 44 67.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58897634 + NM_001244191 KIAA0586 1 3.77 1.18 44 8.15 85.84 25 8.34 Yes 12 2.37 Yes 0 0 No -24 0.86 Yes 46 88.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 58899457 + NM_001244191 KIAA0586 1 0.5 0.19 10 6.88 81.27 40 5.96 Yes 72 -1.88 No 0 0 No -28 0.56 No 42 65.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 58899829 + NM_001244191 KIAA0586 1 2.57 0.92 43 7.87 83.92 30 5.1 No 29 0.49 No 30 0.89 Yes -30 0.85 Yes 40 90.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 58899833 + NM_001244191 KIAA0586 1 0.43 0.15 10 2.58 0 34 5.37 No 33 0.48 No 0 0 No -34 0.86 Yes 36 90.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 58906787 + NM_001244191 KIAA0586 1 4.39 1.67 54 10.59 88.27 29 5.21 No 16 0.79 Yes 28 0.67 Yes -28 0.78 Yes 42 86.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 58907938 + NM_001244191 KIAA0586 1 5.43 2.18 60 8.33 84.06 44 5.54 No 31 0.97 Yes 37 0.87 Yes -37 0.93 Yes 33 97.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 58909009 + NM_001244191 KIAA0586 1 0.67 0.26 15 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -29 0.45 No 54 53.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58909425 + NM_001244191 KIAA0586 1 0.33 0.13 8 -7.18 81.18 33 6.85 Yes 20 0.9 Yes 0 0 No -27 0.43 No 38 49.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58941798 + NM_001244191 KIAA0586 1 0.28 0.13 9 4.17 87.04 21 4.33 No 0 0.88 Yes 0 0 No -21 0.68 Yes 49 72.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 58943845 + NM_001244191 KIAA0586 1 0.27 0.13 8 2.27 0 34 6.93 Yes 57 1.74 Yes 0 0 No -34 0.64 No 36 73.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 58962200 + NM_001244191 KIAA0586 1 1.19 0.42 20 8.19 94.25 19 5.48 No 6 1.09 Yes 0 0 No -23 0.34 No 47 65.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58964919 + NM_001244191 KIAA0586 1 0.38 0.14 8 8.19 96.76 26 6.08 Yes 13 1.14 Yes 0 0 No -25 0.79 Yes 45 80.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 58975119 + NM_001244191 KIAA0586 1 0.58 0.21 11 5.3 82.68 21 5.2 No 8 0.91 Yes 0 0 No -20 0.82 Yes 50 70.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 58987639 + NM_001244191 KIAA0586 1 0.62 0.13 8 9.07 79.08 27 6.32 Yes 14 0.66 No 26 0.4 Yes -26 0.57 No 44 56.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 58980913 + NM_001244191 KIAA0586 1 10.87 2.6 63 11.81 85.07 27 3.79 No 4 0.98 Yes 0 0 No -23 0.51 No 47 69.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58980976 + NM_001244191 KIAA0586 1 1.76 0.44 27 5.53 71.49 22 5.29 No 67 0.93 Yes 0 0 No -21 0.7 Yes 49 66.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 58987639 + NM_001244191 KIAA0586 1 23.89 5.71 69 9.07 79.08 27 6.32 Yes 14 0.66 No 26 0.4 Yes -26 0.57 No 44 56.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 58987654 + NM_001244191 KIAA0586 1 12.11 2.85 65 4.94 81.75 24 4.68 No -1 0.9 Yes 0 0 No -23 0.85 Yes 47 79.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 59010600 + NM_001244191 KIAA0586 1 18.08 3.18 67 11.08 83.28 36 6.74 Yes 1 1.02 Yes 29 0.75 Yes -29 0.88 Yes 41 89.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 6493256 - NM_014804 KIAA0753 1 0.37 0.15 10 9.43 80.02 16 4.03 No 58 -2.38 No 0 0 No -23 0.66 Yes 47 42.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 6493899 - NM_014804 KIAA0753 1 4.14 1.97 58 6.66 77.33 29 4.94 No 55 1.37 Yes 28 0.55 Yes -28 0.67 Yes 42 73.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 6501846 - NM_014804 KIAA0753 1 0.76 0.24 13 9.18 82.61 20 5.53 No 7 0.45 No 0 0 No -19 0.83 Yes 51 89.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 6503756 - NM_014804 KIAA0753 1 0.35 0.13 9 3.62 75.49 29 5.66 Yes 41 0.62 No 0 0 No -28 0.69 Yes 23 44.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 6527009 - NM_014804 KIAA0753 1 5.15 1.17 49 7.25 81.17 25 4.7 No 35 1.63 Yes 24 0.7 Yes -24 0.42 No 49 55.84 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 6527327 - NM_014804 KIAA0753 1 3.86 0.9 40 8.93 79.38 29 5.81 Yes 43 -2.76 No 27 0.71 Yes -27 0.91 Yes 43 92.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 6528178 - NM_014804 KIAA0753 1 0.65 0.19 12 1.16 0 53 6.62 Yes 2 0.66 No 0 0 No -38 0.45 No 32 38.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 6530289 - NM_014804 KIAA0753 1 1.45 0.4 22 8.12 73.85 40 6.63 Yes -1 0.5 No 0 0 No -39 0.82 Yes 31 84.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 6531614 - NM_014804 KIAA0753 1 0.99 0.35 21 7.8 89.87 16 5.28 No 3 0.27 No 22 0.69 Yes -28 0.58 No 42 65.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67213454 - NM_001040715 KIAA0895L 1 0.85 0.17 11 2.82 0 21 4.58 No 19 0.16 No 0 0 No -31 0.35 No 50 40.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67213858 - NM_001040715 KIAA0895L 1 1.99 0.4 21 -0.05 0 31 5.83 Yes 40 -1.37 No 23 0.97 Yes -30 0.89 Yes 40 87.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67215601 - NM_001040715 KIAA0895L 1 106.69 9.89 72 8.28 84.22 24 5.48 No 11 0.11 No 23 0.84 Yes -27 0.78 Yes 43 89.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155886495 - NM_014949 KIAA0907 1 0.44 0.11 8 -2.26 0 13 3.87 No 48 1.5 Yes 0 0 No -60 0.62 No 10 40.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155886501 - NM_014949 KIAA0907 1 52.99 13.83 72 6.42 71.79 33 6.03 Yes 42 1.5 Yes 32 0.88 Yes -54 0.53 No 16 84.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 155891316 - NM_014949 KIAA0907 1 10.93 8.64 72 5.08 78.97 27 6.45 Yes 14 1 Yes 0 0 No -26 0.81 Yes 44 79.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155891319 - NM_014949 KIAA0907 1 15.75 12.67 72 7.42 81.76 24 6.22 Yes 11 1 Yes 23 0.9 Yes -23 0.77 Yes 47 79.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155891319 - NM_014949 KIAA0907 1 0.24 0.19 12 7.42 81.76 24 6.22 Yes 11 1 Yes 23 0.9 Yes -23 0.77 Yes 47 79.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155896655 - NM_014949 KIAA0907 1 0.13 0.11 7 2.96 86.39 17 4.77 No 54 -3.02 No 20 0.81 Yes -20 0.62 No 50 74.21 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 155899162 - NM_014949 KIAA0907 1 0.41 0.31 17 -0.13 0 27 6.52 Yes 10 0.53 No 0 0 No -26 0.86 Yes 44 83.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155899537 - NM_014949 KIAA0907 1 0.77 0.56 25 8.97 80.91 23 4.72 No 7 0.8 Yes 0 0 No -22 0.88 Yes 48 89.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155899626 - NM_014949 KIAA0907 1 0.47 0.33 20 3.14 0 9 3.87 No 11 1.25 Yes 0 0 No -28 0.57 No 42 68.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 154448832 + NM_001131007 KIAA0922 1 0.1 0.17 11 8.89 80.96 30 7.39 Yes 34 1.51 Yes 0 0 No -25 0.5 No 41 58.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 154478127 + NM_001131007 KIAA0922 1 0.23 0.42 25 -0.94 0 13 4.36 No 18 1.51 Yes 0 0 No -30 0.87 Yes 40 89.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154501981 + NM_001131007 KIAA0922 1 0.28 0.86 46 2.68 0 36 5.33 No 36 0.74 No 0 0 No -36 0.92 Yes 34 96.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 154502007 + NM_001131007 KIAA0922 1 0.06 0.22 11 3.93 0 18 4.36 No 5 1.48 Yes 0 0 No -17 0.83 Yes 53 77.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154504377 + NM_001131007 KIAA0922 1 0.53 1.69 60 6.19 86.36 23 4.1 No 38 1.36 Yes 0 0 No -29 0.86 Yes 41 88.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154504757 + NM_001131007 KIAA0922 1 0.04 0.13 7 7.55 86.73 26 5.1 No 13 0.77 No 0 0 No -25 0.97 Yes 45 98.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 154505360 + NM_001131007 KIAA0922 1 0.08 0.17 11 6.86 86.44 13 5.79 Yes 75 1.04 Yes 0 0 No -31 0.6 No 39 49.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 154505977 + NM_001131007 KIAA0922 1 0.08 0.18 13 -0.97 0 17 4.42 No 4 0.68 No 25 0.92 Yes -23 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 154505989 + NM_001131007 KIAA0922 1 30.46 70.14 72 -0.81 61.65 29 5.26 No 16 0.62 No 25 0.92 Yes -28 0.74 Yes 35 63.83 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 154507397 + NM_001131007 KIAA0922 1 1.13 3.33 69 10.31 95.14 32 5.85 Yes 19 1.17 Yes 0 0 No -25 0.94 Yes 45 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154524956 + NM_001131007 KIAA0922 1 2.17 5.76 71 -1.39 64.88 27 7.29 Yes 14 1.33 Yes 0 0 No -26 0.81 Yes 44 75.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154525000 + NM_001131007 KIAA0922 1 0.14 0.35 20 2.54 75.36 43 6.19 Yes 58 1.33 Yes 0 0 No -20 0.38 No 33 43.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 154534435 + NM_001131007 KIAA0922 1 0.31 0.68 36 5.39 87.13 26 5.41 No 27 0.13 No 0 0 No -25 0.88 Yes 45 86.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 154538730 + NM_001131007 KIAA0922 1 0.08 0.19 11 9.05 85.67 25 5.57 Yes 12 0.5 No 0 0 No -21 0.78 Yes 49 80.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 154538838 + NM_001131007 KIAA0922 1 0.18 0.39 21 4.8 84.47 26 5.29 No 13 1.91 Yes 0 0 No -25 0.92 Yes 45 96.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154544052 + NM_001131007 KIAA0922 1 21.04 44.1 72 4.47 78.59 24 6.4 Yes 67 1.09 Yes 0 0 No -23 0.53 No 44 70.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 154546196 + NM_001131007 KIAA0922 1 0.07 0.13 8 3.63 71.74 26 6.61 Yes 38 1.36 Yes 0 0 No -26 0.82 Yes 44 74.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154546232 + NM_001131007 KIAA0922 1 0.32 0.6 26 5.35 79.83 32 6.03 Yes 74 1.35 Yes 0 0 No -31 0.81 Yes 39 79.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154549639 + NM_001131007 KIAA0922 1 0.27 0.76 32 6.14 77.94 49 7.71 Yes 36 1.04 Yes 0 0 No -26 0.61 No 44 59.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 154554387 + NM_001131007 KIAA0922 1 0.13 0.24 10 8.9 87.01 37 8.36 Yes 24 1.23 Yes 25 0.87 Yes -25 0.82 Yes 45 87.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 154555344 + NM_001131007 KIAA0922 1 0.07 0.13 8 -13.62 0 28 5.57 Yes 29 0.99 Yes 0 0 No -27 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 154556622 + NM_001131007 KIAA0922 1 1.95 4.49 68 10.88 83.89 32 6.64 Yes 48 0.61 No 0 0 No -27 0.68 Yes 43 58.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 45599010 - NM_001009880 KIAA0930 1 0.12 0.13 7 -0.24 0 11 5.92 Yes 72 1.67 Yes 0 0 No -29 0.41 No 37 39.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 45607314 - NM_001009880 KIAA0930 1 0.24 0.21 11 11.34 85.93 14 5.29 No 61 1.57 Yes 30 0.45 Yes -30 0.59 No 40 71.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 45635251 - NM_001009880 KIAA0930 1 0.63 0.24 14 6.95 83.46 31 5.83 Yes 18 0.02 No 0 0 No -30 0.87 Yes 40 93.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 123098628 + NM_015312 KIAA1109 1 6.23 3.79 68 11.59 87.77 24 5.09 No 57 0.93 Yes 0 0 No -23 0.47 No 47 72.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 123099489 + NM_015312 KIAA1109 1 0.36 0.24 15 4.19 74.15 34 6.59 Yes -4 0.17 No 0 0 No -33 0.8 Yes 37 92.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 123110069 + NM_015312 KIAA1109 1 0.6 0.36 20 7.77 89.55 33 6.78 Yes 20 0.5 No 0 0 No -32 0.7 Yes 38 77.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 123133153 + NM_015312 KIAA1109 1 0.49 0.19 13 7.94 94.37 23 4.15 No 72 1.79 Yes 0 0 No -22 0.78 Yes 48 88.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123145631 + NM_015312 KIAA1109 1 0.46 0.13 7 7.44 82.89 27 6.09 Yes 14 0.52 No 25 0.78 Yes -27 0.76 Yes 43 72.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 123145655 + NM_015312 KIAA1109 1 12.48 2.9 66 4.9 84.51 21 5.1 No 8 0.95 Yes 25 0.78 Yes -26 0.62 No 44 63.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 123146977 + NM_015312 KIAA1109 1 1.61 0.47 24 3.44 70.48 53 6.03 Yes 28 1.97 Yes 0 0 No -26 0.53 No 30 65.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 123161245 + NM_015312 KIAA1109 1 0.3 0.15 9 7.7 82.64 25 4.19 No 12 0.68 No 0 0 No -24 0.9 Yes 46 90.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 123164137 + NM_015312 KIAA1109 1 0.19 0.1 7 -6.27 0 17 4 No 73 -6.57 No 22 0.47 Yes -16 0.33 No 40 22.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 123166176 + NM_015312 KIAA1109 1 0.34 0.15 8 -10.14 0 21 5.35 No 8 0.55 No 0 0 No -24 0.56 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 123172186 + NM_015312 KIAA1109 1 0.26 0.1 7 5.79 80.91 24 7.58 Yes 11 1.26 Yes 0 0 No -28 0.81 Yes 42 75.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123175963 + NM_015312 KIAA1109 1 0.3 0.15 7 -2.53 0 42 8.12 Yes 29 1.15 Yes 0 0 No -41 0.83 Yes 29 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123191446 + NM_015312 KIAA1109 1 0.27 0.11 7 11 94.94 22 5.99 Yes 9 1.34 Yes 0 0 No -21 0.83 Yes 49 81.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123193677 + NM_015312 KIAA1109 1 0.29 0.1 7 6.27 94.37 25 7.94 Yes 12 0.97 Yes 0 0 No -24 0.87 Yes 46 95.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123242162 + NM_015312 KIAA1109 1 1.95 0.71 34 10.1 85.86 32 6.49 Yes 33 1.38 Yes 0 0 No -31 0.68 Yes 25 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123246839 + NM_015312 KIAA1109 1 1.21 0.25 13 7.71 87.64 28 7.1 Yes 15 0.91 Yes 21 0.86 Yes -21 0.74 Yes 49 85.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 123247009 + NM_015312 KIAA1109 1 32.48 6.19 72 2.72 75.77 44 5.73 Yes 31 0.59 No 24 0.77 Yes -43 0.8 Yes 27 91.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 123249353 + NM_015312 KIAA1109 1 4.28 0.79 35 6.4 84.86 23 4.88 No 47 1.1 Yes 0 0 No -22 0.76 Yes 48 79.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123271957 + NM_015312 KIAA1109 1 0.31 0.14 8 -1.48 0 19 4.24 No 76 -6.86 No 0 0 No -18 0.87 Yes 52 68.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 44795100 - NM_020696 KIAA1143 1 1.26 2.69 68 7.65 84.4 27 5.02 No 44 -2.13 No 0 0 No -32 0.49 No 41 36.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 44795852 - NM_020696 KIAA1143 1 0.14 0.13 7 -10.1 0 12 4 No 28 0.43 No 0 0 No -34 0.75 Yes 36 87.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44795859 - NM_020696 KIAA1143 1 0.53 0.43 27 1.85 82.03 34 6.63 Yes 21 0.43 No 0 0 No -27 0.76 Yes 43 88.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44798052 - NM_020696 KIAA1143 1 0.25 0.22 12 4.07 87.64 32 5.58 Yes 19 1.26 Yes 0 0 No -31 0.31 No 39 51.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 141362780 - NM_001080392 KIAA1147 1 1.34 0.81 41 7.74 83.06 28 6.4 Yes 15 1.38 Yes 0 0 No -27 0.72 Yes 43 61.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 141363553 - NM_001080392 KIAA1147 1 0.56 0.36 21 9.65 85.7 36 5.45 No 31 0.65 No 0 0 No -35 0.46 No 46 35.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 141364037 - NM_001080392 KIAA1147 1 1.53 1.07 48 0.95 0 24 5.94 Yes 56 0.66 No 0 0 No -23 0.97 Yes 47 94.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 141373333 - NM_001080392 KIAA1147 1 0.26 0.19 11 8.16 79.86 55 6 Yes 34 0.52 No 0 0 No -54 0.63 No 16 67.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 141376596 - NM_001080392 KIAA1147 1 0.16 0.14 9 7.54 83.95 20 7.9 Yes 7 0.65 No 0 0 No -19 0.76 Yes 51 92.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 141382338 - NM_001080392 KIAA1147 1 0.95 0.61 32 8.43 86.72 25 6.12 Yes 12 0.76 No 0 0 No -24 0.84 Yes 46 91.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 141383006 - NM_001080392 KIAA1147 1 0.15 0.11 7 12.74 98.88 31 7.86 Yes 18 1.17 Yes 0 0 No -31 0.63 No 39 75.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 175775038 - NM_020444 KIAA1191 1 0.13 0.14 8 8.1 86.08 20 6.16 Yes 7 0.82 Yes 0 0 No -19 0.72 Yes 51 80.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 175777736 - NM_020444 KIAA1191 1 0.13 0.13 8 3.89 0 29 7.04 Yes 16 1.29 Yes 0 0 No -28 0.88 Yes 42 77.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 175777736 - NM_020444 KIAA1191 1 0.92 0.85 38 3.89 0 29 7.04 Yes 16 1.29 Yes 0 0 No -28 0.88 Yes 42 77.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 175780432 - NM_020444 KIAA1191 1 0.42 0.29 15 10.41 80.65 33 5.1 No 56 0.78 Yes 25 0.54 Yes -25 0.53 No 45 52.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 95504023 - NM_015496 KIAA1429 1 0.24 0.35 21 4.18 86.42 18 6.23 Yes 5 0.54 No 0 0 No -22 0.7 Yes 48 68.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 95508071 - NM_015496 KIAA1429 1 0.11 0.11 8 -1.93 0 31 5.81 Yes 74 0.49 No 0 0 No -30 0.69 Yes 40 70.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95508076 - NM_015496 KIAA1429 1 0.55 0.56 30 3.7 83.47 26 5.47 No 69 0.49 No 0 0 No -25 0.69 Yes 45 74.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95528352 - NM_015496 KIAA1429 1 0.17 0.26 17 2.64 0 21 4.11 No 12 0.01 No 0 0 No -20 0.9 Yes 50 82.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95541488 - NM_015496 KIAA1429 1 0.15 0.22 14 6.25 91.5 21 6.21 Yes 8 1.16 Yes 0 0 No -20 0.71 Yes 50 77.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 95541598 - NM_015496 KIAA1429 1 0.06 0.1 7 1.54 54.52 45 5.5 No 67 -3.29 No 33 0.27 Yes -28 0.49 No 28 59.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 95552273 - NM_015496 KIAA1429 1 0.23 0.25 15 8.47 85.97 40 7.19 Yes 54 -1.48 No 0 0 No -39 0.62 No 28 70.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 95560434 - NM_015496 KIAA1429 1 1.21 1.43 51 9.69 90.79 34 5.55 No 26 0.6 No 0 0 No -33 0.85 Yes 37 92.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95562157 - NM_015496 KIAA1429 1 0.27 0.28 17 8.37 86.62 21 7.2 Yes 8 1.21 Yes 0 0 No -20 0.68 Yes 50 88.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59855609 + NR_144408 KIAA1468 1 0.36 0.13 9 8.64 90.25 22 5.06 No 9 0.53 No 0 0 No -22 0.78 Yes 48 83.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 59881921 + NR_144408 KIAA1468 1 0.37 0.24 15 5.95 81.86 34 4.42 No 44 -3.65 No 0 0 No -21 0.96 Yes 49 95.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 59921924 + NR_144408 KIAA1468 1 3.69 2.21 58 10.28 89.03 21 5.63 Yes 8 0.31 No 28 0.33 Yes -23 0.67 Yes 47 63.74 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr18 59925184 + NR_144408 KIAA1468 1 0.72 0.44 26 -3.56 0 24 3.9 No 64 1.7 Yes 0 0 No -24 0.33 No 43 57.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 59933924 + NR_144408 KIAA1468 1 0.35 0.18 11 2.66 0 31 4.4 No 47 0.6 No 23 0.52 Yes -24 0.78 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr18 59936110 + NR_144408 KIAA1468 1 0.9 0.51 26 -2.76 0 17 4.24 No 28 0.58 No 31 0.81 Yes -40 0.83 Yes 30 94.38 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 59936113 + NR_144408 KIAA1468 1 0.99 0.53 25 1.49 0 20 4.58 No 31 0.57 No 31 0.81 Yes -43 0.59 No 27 92.8 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr18 59936643 + NR_144408 KIAA1468 1 0.22 0.17 8 10.66 95.2 24 5.48 No 75 0.51 No 23 0.79 Yes -23 0.73 Yes 47 86.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 59949617 + NR_144408 KIAA1468 1 0.19 0.13 7 5.64 91.35 18 3.96 No 70 -2.77 No 0 0 No -24 0.51 No 46 67.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 59951471 + NR_144408 KIAA1468 1 1.11 0.61 31 8.35 85.72 23 6.5 Yes 10 1.59 Yes 28 0.75 Yes -28 0.65 No 42 46.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 59952415 + NR_144408 KIAA1468 1 0.31 0.15 9 4.71 84.17 27 5.2 No 62 1.34 Yes 0 0 No -26 0.87 Yes 44 73.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59952681 + NR_144408 KIAA1468 1 1.31 0.71 31 8.81 82.09 42 7.09 Yes 29 0.91 Yes 31 0.69 Yes -36 0.63 No 34 68.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 108272575 - NM_020890 KIAA1524 1 0.3 0.46 26 -3.09 58.94 36 8.12 Yes 23 1.55 Yes 0 0 No -39 0.66 No 31 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 108282049 - NM_020890 KIAA1524 1 0.1 0.14 10 4.76 79.65 32 6.72 Yes 41 1.08 Yes 0 0 No -31 0.84 Yes 39 85.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 108282827 - NM_020890 KIAA1524 1 0.25 0.35 23 4.99 91.22 21 3.68 No 27 1.14 Yes 0 0 No -21 0.71 Yes 49 81.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 108283098 - NM_020890 KIAA1524 1 0.08 0.14 9 0.88 0 23 5.26 No 32 -3.86 No 0 0 No -22 0.66 No 48 56.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 108284926 - NM_020890 KIAA1524 1 0.89 0.85 38 9.76 91.87 26 5.31 No 27 0.85 Yes 0 0 No -25 0.79 Yes 45 85.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 108285487 - NM_020890 KIAA1524 1 0.39 0.38 21 -8.54 0 41 5.02 No 48 0.94 Yes 20 0.41 Yes -35 0.68 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 108288395 - NM_020890 KIAA1524 1 0.14 0.21 11 5.15 77.04 28 5.46 No 37 0.61 No 0 0 No -23 0.85 Yes 47 81.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 108288424 - NM_020890 KIAA1524 1 2.43 2.85 67 7.6 84.34 21 5.74 Yes 8 0.64 No 0 0 No -26 0.56 No 44 58.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 108300986 - NM_020890 KIAA1524 1 2.41 2 60 4.67 67.24 41 6.97 Yes 71 0.88 Yes 28 0.63 Yes -40 0.55 No 30 76.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 108301928 - NM_020890 KIAA1524 1 5.19 4.11 69 1.04 76.3 35 6.99 Yes 22 0.47 No 0 0 No -30 0.8 Yes 40 68.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 108304597 - NM_020890 KIAA1524 1 0.57 0.56 29 -3.86 72.61 38 6.38 Yes 25 1.27 Yes 23 0.87 Yes -30 0.73 Yes 33 85.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 108306334 - NM_020890 KIAA1524 1 0.15 0.14 9 -2.35 0 18 4.34 No 39 0.4 No 0 0 No -17 0.58 No 50 57.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 32112923 + NM_018169 KIAA1551 1 0.18 0.13 8 -1.48 80.36 40 6.48 Yes 58 0.66 No 0 0 No -39 0.3 No 31 30.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 32125113 + NM_018169 KIAA1551 1 0.23 0.43 22 0.04 56.05 64 8.96 Yes 51 1.53 Yes 0 0 No -25 0.56 No 45 29.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 32130759 + NM_018169 KIAA1551 1 0.14 0.26 15 2.3 84.41 51 6.64 Yes 38 1.91 Yes 0 0 No -40 0.57 No 30 64.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 32130764 + NM_018169 KIAA1551 1 0.11 0.22 12 -3.12 0 56 6.81 Yes 43 1.89 Yes 0 0 No -45 0.54 No 25 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 32133069 + NM_018169 KIAA1551 1 0.21 0.4 22 8.59 88.56 49 7.07 Yes 36 0.96 Yes 0 0 No -48 0.81 Yes 22 86.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 32140117 + NM_018169 KIAA1551 1 0.67 0.86 37 7.44 81.34 23 5.39 No 10 0.32 No 0 0 No -22 0.82 Yes 48 92.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 32140178 + NM_018169 KIAA1551 1 0.43 0.49 22 -0.62 0 12 3.61 No 71 0.26 No 0 0 No -25 0.87 Yes 45 57.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 56915298 + NM_001286276 KIAA1586 1 0.13 0.13 9 9.06 88.27 18 6.47 Yes 59 1.74 Yes 0 0 No -22 0.78 Yes 48 88.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 56915575 + NM_001286276 KIAA1586 1 0.15 0.18 11 -0.64 0 34 7.76 Yes 31 0.62 No 0 0 No -36 0.66 No 34 84.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 56915751 + NM_001286276 KIAA1586 1 0.1 0.14 9 0.88 80.41 23 4.41 No 60 0.28 No 0 0 No -19 0.48 No 50 41.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61296786 + NM_001330432 KIAA1841 1 1.23 0.24 14 7.62 80.78 56 7.57 Yes 3 0.98 Yes 27 0.88 Yes -27 0.84 Yes 43 83.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 61310388 + NM_001330432 KIAA1841 1 5.71 1.21 47 4.55 71.01 25 7.67 Yes 12 0.84 Yes 0 0 No -24 0.78 Yes 46 78.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61313320 + NM_001330432 KIAA1841 1 4.47 0.75 37 2.41 0 25 5.95 Yes 69 0.59 No 0 0 No -24 0.87 Yes 46 83.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61339656 + NM_001330432 KIAA1841 1 3.16 0.18 11 2.62 0 34 7.74 Yes 53 1.41 Yes 0 0 No -33 0.73 Yes 37 83.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61340904 + NM_001330432 KIAA1841 1 4.76 0.31 15 7.11 77.95 53 7.24 Yes 74 0.88 Yes 0 0 No -27 0.88 Yes 43 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61344495 + NM_001330432 KIAA1841 1 1.16 0.13 8 0.57 0 26 7.2 Yes 13 1.18 Yes 0 0 No -26 0.42 No 34 68.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 115253266 + NM_001287036 KIAA1958 1 1.84 0.18 11 6.54 80.92 17 4.91 No 73 0.72 No 0 0 No -23 0.6 No 47 72.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 115380155 + NM_001287036 KIAA1958 1 1.76 0.17 12 -0.22 0 47 7.97 Yes 39 1.05 Yes 0 0 No -46 0.83 Yes 24 93.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11980386 - NM_138346 KIAA2013 1 0.2 0.36 22 -6.11 0 32 5.86 Yes 19 0.76 No 0 0 No -28 0.75 Yes 42 65.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 11980592 - NM_138346 KIAA2013 1 0.24 0.43 19 7.31 80.8 22 7.35 Yes 9 2.37 Yes 0 0 No -21 0.79 Yes 49 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11984982 - NM_138346 KIAA2013 1 0.8 1.29 47 6.94 78.19 34 4.8 No 71 1.64 Yes 0 0 No -34 0.43 No 37 44.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 5927016 - NM_001017969 KIAA2026 1 1.41 0.72 36 5.86 78.85 58 7.18 Yes 1 1.49 Yes 0 0 No -23 0.76 Yes 47 79.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5931685 - NM_001017969 KIAA2026 1 3.38 0.72 39 2.48 74.74 32 7.82 Yes 37 0.25 No 0 0 No -31 0.42 No 39 49.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 5933882 - NM_001017969 KIAA2026 1 52.71 11.82 72 14.08 92.08 30 4.53 No 28 0.34 No 25 0.69 Yes -25 0.76 Yes 45 79.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 5933882 - NM_001017969 KIAA2026 1 2.43 0.53 31 14.08 92.08 30 4.53 No 28 0.34 No 25 0.69 Yes -25 0.76 Yes 45 79.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 5936840 - NM_001017969 KIAA2026 1 0.44 0.13 8 8.23 85.47 27 6.53 Yes 14 0.14 No 0 0 No -30 0.44 No 41 54.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 5958613 - NM_001017969 KIAA2026 1 0.91 0.47 24 -5.39 0 9 3.87 No 43 1.27 Yes 0 0 No -55 0.44 No 19 78.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 5958617 - NM_001017969 KIAA2026 1 0.23 0.11 7 -1.97 72.18 52 7.55 Yes 39 1.28 Yes 0 0 No -47 0.44 No 23 78.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 5969460 - NM_001017969 KIAA2026 1 0.39 0.14 10 1.8 58.18 55 5.85 Yes 58 0.58 No 27 0.44 Yes -39 0.67 Yes 31 86.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 5986286 - NM_001017969 KIAA2026 1 0.24 0.1 7 6.62 88.67 14 3.86 No 61 -5.13 No 0 0 No -22 0.36 No 48 46.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 5986421 - NM_001017969 KIAA2026 1 1.12 0.42 24 8.36 85.69 31 5.68 Yes 76 0.67 No 0 0 No -31 0.67 Yes 39 46.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 8873159 - NM_020738 KIDINS220 1 0.72 0.42 26 10.71 96.28 24 5.47 No 65 0.64 No 0 0 No -23 0.76 Yes 47 83.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 8889552 - NM_020738 KIDINS220 1 1.09 0.6 33 7.22 82.98 27 5.1 No 1 1.39 Yes 21 0.79 Yes -26 0.36 No 44 68.06 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 8906836 - NM_020738 KIDINS220 1 0.31 0.18 13 7.11 75.61 24 7.44 Yes 59 2.54 Yes 0 0 No -23 0.67 Yes 47 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 8950909 - NM_020738 KIDINS220 1 1.38 0.9 36 8.71 94.37 27 6.86 Yes 14 1.05 Yes 0 0 No -26 0.75 Yes 44 73.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 8952627 - NM_020738 KIDINS220 1 54.42 17.9 72 2.88 69.13 95 9.93 Yes 19 0.36 No 31 0.91 Yes -31 0.68 Yes 39 35.14 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 8966044 - NM_020738 KIDINS220 1 0.92 0.67 28 7.28 85.02 23 7.35 Yes 10 1.39 Yes 22 0.91 Yes -22 0.94 Yes 48 94.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 8976861 - NM_020738 KIDINS220 1 1.97 0.38 19 5.85 84.18 29 5.92 Yes -2 0.01 No 0 0 No -28 0.79 Yes 42 79.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 94365263 + NM_004523 KIF11 1 0.8 0.75 34 3.97 84.41 36 8.87 Yes 28 0.81 Yes 0 0 No -30 0.72 Yes 40 60.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 94381105 + NM_004523 KIF11 1 0.14 0.29 18 -5.62 49.34 50 7.86 Yes 37 1.8 Yes 26 0.9 Yes -49 0.67 Yes 21 86.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 94391947 + NM_004523 KIF11 1 0.34 0.68 33 2.65 0 21 7.05 Yes 8 1.2 Yes 0 0 No -26 0.82 Yes 44 76.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 94397147 + NM_004523 KIF11 1 0.51 0.88 35 -0.39 0 23 6.09 Yes 34 0.86 Yes 0 0 No -22 0.52 No 48 75.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 94405195 + NM_004523 KIF11 1 0.09 0.14 9 5.99 86.05 21 6.09 Yes 2 0.42 No 0 0 No -20 0.64 No 50 86.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 94414807 + NM_004523 KIF11 1 0.08 0.14 7 7.26 78.85 106 8.08 Yes -4 0.65 No 0 0 No -36 0.78 Yes 34 77.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 28932950 - NM_015254 KIF13B 1 0.74 0.25 16 5.79 86.18 24 7.28 Yes 11 1.03 Yes 0 0 No -23 0.86 Yes 47 83.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28956512 - NM_015254 KIF13B 1 0.96 0.53 26 11.54 91.19 18 5.67 Yes 24 0.13 No 0 0 No -30 0.74 Yes 40 83.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 28972185 - NM_015254 KIF13B 1 1.02 0.39 26 12.39 87.46 30 5.82 Yes 34 0.29 No 0 0 No -29 0.69 Yes 41 72.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 28986192 - NM_015254 KIF13B 1 2.13 1.17 44 12.81 82.65 41 6.38 Yes 32 0.8 Yes 0 0 No -40 0.36 No 30 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 28991663 - NM_015254 KIF13B 1 0.22 0.11 7 4.06 77.3 23 5.23 No 50 -2.68 No 0 0 No -31 0.66 No 39 77.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 28997862 - NM_015254 KIF13B 1 0.14 0.1 7 5.39 82.43 32 5.78 Yes 19 1.55 Yes 0 0 No -22 0.72 Yes 48 59.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 29039521 - NM_015254 KIF13B 1 0.31 0.19 13 -2.86 60.62 34 5.95 Yes 49 0.9 Yes 0 0 No -33 0.76 Yes 37 63.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 29052242 - NM_015254 KIF13B 1 0.37 0.14 9 5.03 77.72 42 5.81 Yes 29 0.8 Yes 0 0 No -30 0.63 No 40 61.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 29055266 - NM_015254 KIF13B 1 0.47 0.18 12 11.16 89.16 34 6.32 Yes 21 0.28 No 0 0 No -33 0.94 Yes 37 95.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 29091851 - NM_015254 KIF13B 1 0.89 0.31 20 11.01 83.66 22 5.29 No 21 -1.39 No 0 0 No -19 0.4 No 42 66.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 200539128 - NM_014875 KIF14 1 0.62 0.22 13 -1.01 0 9 3.87 No 18 1.2 Yes 0 0 No -30 0.77 Yes 40 88.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 200568892 - NM_014875 KIF14 1 0.29 0.18 11 7.76 94.4 62 7.62 Yes 49 0.63 No 0 0 No -30 0.49 No 38 48.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 200587308 - NM_014875 KIF14 1 0.65 0.15 9 9.4 82.48 40 5.71 Yes 21 1.04 Yes 0 0 No -33 0.51 No 37 77.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 200587781 - NM_014875 KIF14 1 1.96 0.32 20 6.79 70.7 32 4.48 No 72 1.1 Yes 0 0 No -31 0.59 No 41 66.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 200588803 - NM_014875 KIF14 1 16.34 2.49 62 7.06 85.66 29 9.12 Yes 28 0.83 Yes 0 0 No -28 0.47 No 42 82.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 44807511 + NM_020242 KIF15 1 3.82 1.9 55 6.77 85.02 22 5.74 Yes 9 1.16 Yes 0 0 No -21 0.81 Yes 49 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 44823963 + NM_020242 KIF15 1 0.19 0.13 9 5.27 83.72 22 7.07 Yes 9 0.22 No 0 0 No -21 0.55 No 49 44.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 44838276 + NM_020242 KIF15 1 0.36 0.32 16 9.14 90.56 26 5.25 No 56 0.99 Yes 0 0 No -26 0.64 No 44 59.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 44849305 + NM_020242 KIF15 1 0.18 0.11 7 6.63 86.23 22 8.18 Yes 9 0.49 No 0 0 No -21 0.74 Yes 49 64.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 44849308 + NM_020242 KIF15 1 0.44 0.35 20 2.75 81.17 25 8.37 Yes 12 0.5 No 0 0 No -24 0.76 Yes 46 69.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44853330 + NM_020242 KIF15 1 0.53 0.33 18 9.63 96.9 26 4.94 No 71 0.65 No 0 0 No -25 0.34 No 46 52.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 44871440 + NM_020242 KIF15 1 0.51 0.43 23 -0.64 65.65 49 7.2 Yes 36 0.32 No 25 0.52 Yes -44 0.79 Yes 26 85.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 44872416 + NM_020242 KIF15 1 0.28 0.14 10 5.24 81.33 20 5.87 Yes 33 0.99 Yes 0 0 No -20 0.42 No 39 50.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 44875078 + NM_020242 KIF15 1 0.11 0.1 7 4.89 81.21 22 5.99 Yes 28 0.93 Yes 0 0 No -21 0.88 Yes 49 88.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 44886321 + NM_020242 KIF15 1 1.41 0.99 43 8.78 90.37 22 5.29 No 61 -3.53 No 0 0 No -26 0.68 Yes 44 81.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44890014 + NM_020242 KIF15 1 0.17 0.13 8 -10.34 75.85 41 6.8 Yes 28 1.01 Yes 0 0 No -28 0.5 No 30 63.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 28098480 - NM_031217 KIF18A 1 1.12 0.63 32 11.15 95.65 37 7 Yes 55 0.51 No 31 0.35 Yes -31 0.51 No 39 84.42 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 28103350 - NM_031217 KIF18A 1 1.09 0.83 36 6.11 83.63 17 4.85 No 73 1.35 Yes 0 0 No -27 0.7 Yes 43 71.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 28110608 - NM_031217 KIF18A 1 0.84 0.68 33 6.44 88.12 26 5.1 No 13 1.47 Yes 0 0 No -25 0.94 Yes 45 96.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 43005920 - NM_001264573 KIF18B 1 17.56 8.88 72 8.66 85.23 20 4.66 No 70 0.21 No 29 0.69 Yes -50 0.57 No 41 58.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 43009575 - NM_001264573 KIF18B 1 6.96 2.39 61 4.83 77.1 30 4.62 No 45 1.46 Yes 29 0.69 Yes -57 0.76 Yes 41 59.82 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 43009925 - NM_001264573 KIF18B 1 0.62 0.21 14 9.2 74.51 31 6.08 Yes 64 -0.17 No 0 0 No -24 0.41 No 42 65.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 43010611 - NM_001264573 KIF18B 1 1.87 1.03 42 12.74 86.99 27 8.83 Yes 14 1.84 Yes 0 0 No -26 0.82 Yes 44 81.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 10308920 + NM_015074 KIF1B 1 0.54 0.14 9 5.64 79.57 23 5.83 Yes 55 -4.48 No 0 0 No -22 0.83 Yes 48 89.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 10320145 + NM_015074 KIF1B 1 0.62 0.18 10 7.94 85.9 23 3.89 No 68 -4.55 No 0 0 No -29 0.52 No 48 63.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 10323065 + NM_015074 KIF1B 1 2.4 0.63 32 3.23 72.32 35 6.02 Yes 19 0.45 No 0 0 No -39 0.62 No 31 70.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 10342379 + NM_015074 KIF1B 1 2.79 0.89 40 11.25 90.16 90 11.16 Yes NA NA NA 34 0.28 Yes -34 0.48 No 36 59.48 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 70749472 + NM_015634 KIF1BP 1 0.38 0.18 12 8.94 86.29 51 7.21 Yes 38 1.91 Yes 0 0 No -40 0.83 Yes 30 87.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70754959 + NM_015634 KIF1BP 1 1.08 0.57 27 6.24 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.78 Yes 51 90.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70767382 + NM_015634 KIF1BP 1 0.32 0.24 15 7.95 86.68 19 5.63 Yes 31 1.96 Yes 28 0.3 Yes -18 0.51 No 52 35.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 4902229 + NM_006612 KIF1C 1 0.16 0.13 7 5.84 81.31 20 5.1 No 58 1.22 Yes 0 0 No -19 0.62 No 51 84.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 4902275 + NM_006612 KIF1C 1 0.46 0.38 19 -2.2 61.02 20 5.01 No 72 0.87 Yes 30 0.53 Yes -25 0.44 No 45 56.83 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 4902279 + NM_006612 KIF1C 1 0.42 0.31 18 -6.34 0 24 5.38 No 76 0.87 Yes 30 0.53 Yes -29 0.36 No 41 23.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 4902307 + NM_006612 KIF1C 1 5 4.28 69 13.92 88.75 31 5.56 Yes NA NA NA 30 0.53 Yes -30 0.53 No 41 79.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 4906058 + NM_006612 KIF1C 1 0.19 0.47 27 -6.63 0 36 5.93 Yes 41 1.6 Yes 0 0 No -53 0.41 No 17 49.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 137518977 + NM_005733 KIF20A 1 0.08 0.1 7 4.31 72.28 34 6.1 Yes 29 0.74 No 0 0 No -25 0.89 Yes 45 78.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 91465029 + NM_001284259 KIF20B 1 0.19 0.17 10 -5.08 0 17 4.03 No 73 0.37 No 24 0.73 Yes -16 0.61 No 42 51.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 91474887 + NM_001284259 KIF20B 1 0.33 0.17 12 1.58 65.32 96 8.12 Yes 23 0.89 Yes 0 0 No -38 0.66 No 32 77.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 91477211 + NM_001284259 KIF20B 1 0.2 0.13 8 6.81 75.75 30 5.5 No 41 0.7 No 0 0 No -18 0.66 No 46 62.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 91477361 + NM_001284259 KIF20B 1 0.27 0.21 12 6.66 84.72 36 6.12 Yes 62 0.84 Yes 0 0 No -36 0.49 No 39 62.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 91483654 + NM_001284259 KIF20B 1 0.26 0.17 9 5.02 85.57 27 5.05 No 14 0.7 No 0 0 No -26 0.82 Yes 44 81.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 91483696 + NM_001284259 KIF20B 1 0.22 0.17 10 4.01 80.58 48 7.12 Yes 56 0.71 No 29 0.63 Yes -38 0.41 No 32 46.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 91498697 + NM_001284259 KIF20B 1 0.22 0.22 11 -8.99 0 23 4.43 No 41 0.29 No 26 0.57 Yes -30 0.63 No 58 31.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 91513422 + NM_001284259 KIF20B 1 0.28 0.31 18 4.9 87.81 26 5.66 Yes 42 0.21 No 0 0 No -25 0.86 Yes 16 65.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 91515535 + NM_001284259 KIF20B 1 0.55 0.71 33 7.33 91.22 20 5.57 Yes 7 0.62 No 0 0 No -24 0.31 No 46 57.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 91524935 + NM_001284259 KIF20B 1 0.47 0.49 28 8.18 92.9 34 5.97 Yes 21 0.03 No 0 0 No -33 0.86 Yes 37 81.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 91525276 + NM_001284259 KIF20B 1 0.17 0.19 13 7.93 87.72 14 5.36 No 1 1.29 Yes 0 0 No -25 0.54 No 50 47.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 91526020 + NM_001284259 KIF20B 1 0.23 0.24 11 3.48 70.44 81 6.14 Yes 30 1.73 Yes 27 0.81 Yes -24 0.61 No 28 57.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 91526023 + NM_001284259 KIF20B 1 0.16 0.17 8 0.71 66 84 6.25 Yes 33 1.73 Yes 27 0.81 Yes -27 0.7 Yes 25 54.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 91528113 + NM_001284259 KIF20B 1 0.84 0.86 37 9.08 90.54 22 5.91 Yes 72 0.96 Yes 0 0 No -21 0.74 Yes 49 94.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 39760278 - NM_001173464 KIF21A 1 0.37 0.51 28 0.94 0 30 6.84 Yes 17 0.31 No 0 0 No -29 0.78 Yes 41 83.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 39760991 - NM_001173464 KIF21A 1 0.09 0.13 8 -2.19 0 16 5.81 Yes 57 0.12 No 29 0.46 Yes -29 0.68 Yes 41 83.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 39806513 - NM_001173464 KIF21A 1 0.23 0.22 14 4.1 0 31 7.08 Yes 18 1.46 Yes 0 0 No -30 0.77 Yes 40 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 200946827 - NM_001252100 KIF21B 1 0.29 0.15 9 8.76 85.82 18 4.22 No 2 0.82 Yes 0 0 No -32 0.44 No 53 37.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 200959848 - NM_001252100 KIF21B 1 0.6 0.24 14 -3 0 45 6.69 Yes 32 0.2 No 0 0 No -28 0.54 No 42 56.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 200960129 - NM_001252100 KIF21B 1 0.34 0.14 7 7.06 84.27 26 5.28 No 13 0.66 No 0 0 No -25 0.73 Yes 45 72.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 200965867 - NM_001252100 KIF21B 1 0.24 0.11 7 12.24 87.8 63 7.25 Yes 55 0.27 No 0 0 No -38 0.44 No 27 55.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 200968623 - NM_001252100 KIF21B 1 0.88 0.17 10 2.04 0 54 7.75 Yes 50 0.26 No 24 0.74 Yes -34 0.57 No 36 44.73 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 200972371 - NM_001252100 KIF21B 1 2.08 0.94 38 7.48 80.99 21 6.81 Yes 8 1.12 Yes 0 0 No -30 0.42 No 40 83.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 200980163 - NM_001252100 KIF21B 1 2.77 0.43 27 9.9 83.58 29 7.19 Yes 16 1.19 Yes 0 0 No -28 0.9 Yes 42 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 29811281 + NM_001256270 KIF22 1 0.24 0.47 23 3.04 78.45 25 5.2 No 42 -3.37 No 0 0 No -24 0.87 Yes 46 94.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 29811494 + NM_001256270 KIF22 1 0.53 1.04 44 7.94 74.14 33 6.69 Yes 20 1.11 Yes 32 0.75 Yes -32 0.71 Yes 38 83.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 29813828 + NM_001256270 KIF22 1 0.32 0.74 32 4.47 84.84 30 5.23 No 67 1.1 Yes 0 0 No -24 0.83 Yes 46 91.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 29813831 + NM_001256270 KIF22 1 0.32 0.58 28 4.33 76.84 33 5.38 No 70 1.09 Yes 0 0 No -27 0.83 Yes 43 90.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 29814168 + NM_001256270 KIF22 1 0.25 0.54 27 9.83 91.19 28 5.83 Yes 15 0.63 No 0 0 No -27 0.95 Yes 43 95.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 29814719 + NM_001256270 KIF22 1 1.36 2.25 62 5.96 87.16 25 4.75 No 3 1.99 Yes 25 0.97 Yes -24 0.97 Yes 46 95.49 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 29815323 + NM_001256270 KIF22 1 0.05 0.14 8 2.23 0 33 7.23 Yes 20 2.38 Yes 0 0 No -32 0.62 No 38 71.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 69713048 + NM_001281301 KIF23 1 0.14 0.14 9 2.54 83.57 30 6.66 Yes 68 -3.15 No 0 0 No -29 0.65 No 41 72.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 69713052 + NM_001281301 KIF23 1 0.28 0.22 14 3.83 0 34 6.82 Yes 72 -3.15 No 0 0 No -33 0.64 No 37 73.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 69717620 + NM_001281301 KIF23 1 17.84 11.18 72 8.16 86.07 25 5.92 Yes 12 1.61 Yes 24 0.77 Yes -25 0.66 No 45 74.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 69728931 + NM_001281301 KIF23 1 0.18 0.14 9 7.66 80.29 15 6.16 Yes 48 1.05 Yes 0 0 No -18 0.56 No 52 48.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 69738624 + NM_001281301 KIF23 1 1.99 1.67 52 4.45 77.47 33 7.18 Yes 50 1.46 Yes 21 0.73 Yes -32 0.59 No 38 79.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 69738769 + NM_001281301 KIF23 1 0.22 0.15 10 6.62 79.94 33 5.83 Yes 6 0.4 No 0 0 No -32 0.86 Yes 38 79.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 34261681 - NM_194313 KIF24 1 2.72 0.4 24 4.34 77.7 36 5.15 No 6 0.05 No 0 0 No -35 0.64 No 35 71.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 34288478 - NM_194313 KIF24 1 1.72 0.25 14 0.37 0 30 13.23 Yes 60 1.16 Yes 0 0 No -38 0.75 Yes 41 72.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 34288483 - NM_194313 KIF24 1 5.17 0.65 32 1.71 86 25 13.05 Yes 55 1.18 Yes 0 0 No -33 0.65 No 46 70.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 34309078 - NM_194313 KIF24 1 0.99 0.19 10 7.02 82.33 38 8.21 Yes 48 1.8 Yes 0 0 No -37 0.65 No 33 73.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 34319622 - NM_194313 KIF24 1 7.3 0.78 38 8.75 78.11 30 6.39 Yes 17 1.31 Yes 0 0 No -29 0.82 Yes 41 67.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 245864771 + NM_018012 KIF26B 1 0.48 0.14 9 9.8 85.39 23 5.39 No 61 1.45 Yes 0 0 No -22 0.93 Yes 48 93.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86518423 - NM_017576 KIF27 1 25.74 1.08 45 5.47 68.85 35 5.57 Yes 44 0.25 No 0 0 No -24 0.59 No 46 75.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 86518694 - NM_017576 KIF27 1 13.44 0.47 23 4.27 80.57 27 5.56 Yes 14 0.44 No 0 0 No -26 0.94 Yes 44 94.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 61643850 + NM_001243952 KIF2A 1 0.23 0.76 34 1.28 71.78 25 4.62 No 65 0.09 No 29 0.88 Yes -24 0.88 Yes 46 87.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 61646462 + NM_001243952 KIF2A 1 0.07 0.22 14 5.24 86.28 25 4.62 No -1 0.28 No 0 0 No -25 0.37 No 46 47.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 61649083 + NM_001243952 KIF2A 1 0.5 0.74 33 3.67 86.29 25 5.2 No 44 -3.31 No 22 0.76 Yes -24 0.73 Yes 46 65.75 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 61650141 + NM_001243952 KIF2A 1 0.23 0.63 32 7.61 85.26 39 7.64 Yes 11 1.08 Yes 0 0 No -38 0.88 Yes 32 97.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 61653978 + NM_001243952 KIF2A 1 0.06 0.15 10 -2.79 55.96 18 4.88 No 23 0.91 Yes 0 0 No -35 0.59 No 35 57.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 61657551 + NM_001243952 KIF2A 1 0.39 1.4 43 5.73 85.05 19 5.79 Yes 76 1.33 Yes 0 0 No -24 0.93 Yes 46 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 61657554 + NM_001243952 KIF2A 1 0.08 0.31 18 2.43 83.21 22 5.99 Yes 9 0.91 Yes 0 0 No -27 0.93 Yes 43 96.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 61668264 + NM_001243952 KIF2A 1 0.2 0.49 25 7.18 88.17 43 5.81 Yes 13 0.43 No 25 0.71 Yes -25 0.61 No 44 48.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 61681316 + NM_001243952 KIF2A 1 0.38 0.99 37 -5.65 0 9 3.8 No 32 1.15 Yes 0 0 No -33 0.89 Yes 37 91.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 61681334 + NM_001243952 KIF2A 1 0.04 0.1 7 5.8 87.92 22 4.08 No 50 1.15 Yes 0 0 No -51 0.87 Yes 19 90.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45215980 + NM_001297656 KIF2C 1 0.16 0.24 12 8.13 85.26 17 7.45 Yes 4 1.27 Yes 36 0.23 Yes -30 0.36 No 40 54.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 45216040 + NM_001297656 KIF2C 1 0.09 0.17 10 6.33 86.08 17 5.34 No 64 1.24 Yes 0 0 No -27 0.56 No 49 67.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45221714 + NM_001297656 KIF2C 1 0.44 0.74 38 9.93 94.63 24 4.95 No 7 1.42 Yes 23 0.92 Yes -23 0.7 Yes 47 79.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 45221786 + NM_001297656 KIF2C 1 0.49 0.86 38 5.97 78.74 20 5.8 Yes 47 1.04 Yes 0 0 No -19 0.76 Yes 51 63.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45226058 + NM_001297656 KIF2C 1 0.12 0.18 11 3.84 80.78 16 4.69 No 34 -2.27 No 0 0 No -21 0.89 Yes 49 87.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45226242 + NM_001297656 KIF2C 1 0.27 0.29 21 -14.53 0 16 3.37 No 13 -2.2 No 23 0.87 Yes -16 0.36 No 15 33.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 45227900 + NM_001297656 KIF2C 1 0.46 0.63 29 4.93 79.37 25 5.56 Yes 12 -0.81 No 24 0.83 Yes -24 0.72 Yes 46 79.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 45232501 + NM_001297656 KIF2C 1 0.06 0.11 7 0.62 0 28 5.57 Yes 15 1.03 Yes 0 0 No -27 0.9 Yes 43 90.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 132031669 - NM_007054 KIF3A 1 1.49 0.54 29 6.81 91.42 16 7.19 Yes 3 1.86 Yes 0 0 No -31 0.63 No 39 81.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 132042152 - NM_007054 KIF3A 1 133.63 20.64 72 3.83 77.92 79 9.5 Yes 66 1.37 Yes 18 0.71 Yes -18 0.75 Yes 52 81.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 132042152 - NM_007054 KIF3A 1 1.68 0.28 14 3.83 77.92 79 9.5 Yes 66 1.37 Yes 18 0.71 Yes -18 0.75 Yes 52 81.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 132044671 - NM_007054 KIF3A 1 1.51 0.24 17 10.06 98.74 113 6.9 Yes 67 1.53 Yes 29 0.05 Yes -56 0.54 No 14 67.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 132046747 - NM_007054 KIF3A 1 0.32 0.19 12 -12.75 71.92 18 4.98 No 62 0.6 No 0 0 No -26 0.53 No 44 66.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 30897523 + NM_004798 KIF3B 1 0.68 0.13 8 -0.36 0 11 4.12 No 36 0.64 No 0 0 No -31 0.9 Yes 39 89.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30903949 + NM_004798 KIF3B 1 0.16 0.21 13 7.46 95.29 20 4.65 No 7 1.26 Yes 0 0 No -19 0.63 No 51 76.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 30904570 + NM_004798 KIF3B 1 0.22 0.36 20 0.88 0 20 4.58 No 23 2.07 Yes 0 0 No -19 0.63 No 35 81.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 30909502 + NM_004798 KIF3B 1 0.22 0.25 16 7.99 80.72 46 8.1 Yes 64 0.68 No 0 0 No -29 0.63 No 41 70.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 30915184 + NM_004798 KIF3B 1 0.57 0.75 34 3.99 73.35 30 4.57 No 55 0.82 Yes 0 0 No -26 0.7 Yes 44 84.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30915347 + NM_004798 KIF3B 1 0.34 0.44 24 2.41 82.13 19 3.8 No -3 0.37 No 20 0.88 Yes -22 0.83 Yes 48 75.9 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 30917870 + NM_004798 KIF3B 1 0.15 0.17 9 -5.95 85.94 30 5.61 Yes 17 0.55 No 0 0 No -29 0.82 Yes 41 81.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 69510603 + NM_012310 KIF4A 1 0.68 0.31 18 6.95 82.84 45 5.25 No 76 1.06 Yes 0 0 No -36 0.85 Yes 34 74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 69550015 + NM_012310 KIF4A 1 0.19 0.18 12 3.53 0 12 4.24 No 37 0.91 Yes 0 0 No -44 0.62 No 26 75.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 69553902 + NM_012310 KIF4A 1 0.41 0.14 9 6.94 81.13 57 7.54 Yes 13 0.8 Yes 0 0 No -25 0.87 Yes 45 84.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 69558636 + NM_012310 KIF4A 1 1.37 0.54 23 5.13 90.76 23 5 No 41 0.22 No 0 0 No -22 0.62 No 42 47.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 69585577 + NM_012310 KIF4A 1 0.38 0.18 10 8.52 88.97 32 7.25 Yes 19 1.14 Yes 0 0 No -31 0.88 Yes 39 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 69626126 + NM_012310 KIF4A 1 0.27 0.19 12 6.12 88.07 13 5.2 No 0 2.06 Yes 0 0 No -24 0.58 No 21 61.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 32307083 - NM_004521 KIF5B 1 0.13 0.43 26 -10.35 78.73 18 4.97 No 5 1.32 Yes 0 0 No -23 0.5 No 36 50.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 32311203 - NM_004521 KIF5B 1 0.08 0.25 13 5.11 76.16 34 6.03 Yes 46 0.15 No 24 0.92 Yes -34 0.85 Yes 36 89.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 32311962 - NM_004521 KIF5B 1 0.77 1.85 59 4.67 85.23 31 8.08 Yes 34 1.25 Yes 0 0 No -31 0.71 Yes 39 80.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 32326306 - NM_004521 KIF5B 1 0.04 0.11 7 -14.03 0 39 6.48 Yes 1 0.65 No 0 0 No -28 0.74 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 32327146 - NM_004521 KIF5B 1 0.03 0.13 7 -9.85 0 23 6.4 Yes 10 2.17 Yes 0 0 No -22 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 32328377 - NM_004521 KIF5B 1 0.1 0.28 13 -9.21 0 16 3.98 No 37 0.81 Yes 28 0.64 Yes -34 0.58 No 41 52.71 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 32333883 - NM_004521 KIF5B 1 0.06 0.17 11 7.47 75.43 30 7.48 Yes 17 1.06 Yes 0 0 No -33 0.7 Yes 41 36.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 32336504 - NM_004521 KIF5B 1 0.05 0.13 7 8 85.39 31 7.58 Yes 76 -5.99 No 0 0 No -30 0.91 Yes 40 93.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 32339452 - NM_004521 KIF5B 1 0.21 0.4 24 9.07 79.13 27 5.98 Yes 14 1.07 Yes 0 0 No -26 0.97 Yes 44 96.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 169894997 - NM_001204517 KIFAP3 1 1.82 2.21 60 6.25 86.73 23 6.41 Yes 7 0.89 Yes 0 0 No -30 0.78 Yes 40 74.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 169911615 - NM_001204517 KIFAP3 1 0.21 0.21 8 6.35 79 50 7.47 Yes 37 0.79 Yes 0 0 No -28 0.65 No 47 59.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169920959 - NM_001204517 KIFAP3 1 1.25 1.46 49 10.77 89.52 37 6.02 Yes 46 0.74 No 0 0 No -27 0.6 No 43 56.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 169939259 - NM_001204517 KIFAP3 1 0.1 0.13 7 7.63 83.08 28 6.23 Yes 15 1.5 Yes 0 0 No -27 0.73 Yes 43 85.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 169941738 - NM_001204517 KIFAP3 1 0.1 0.15 10 -0.14 85.63 18 6.12 Yes 5 1.31 Yes 0 0 No -31 0.34 No 33 44.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169941952 - NM_001204517 KIFAP3 1 0.11 0.17 9 7.47 81.04 31 6.84 Yes 18 2.11 Yes 0 0 No -30 0.69 Yes 40 87.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 169942880 - NM_001204517 KIFAP3 1 0.17 0.25 16 4.29 75.23 33 8.93 Yes 20 1.02 Yes 0 0 No -32 0.72 Yes 38 72.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 169950215 - NM_001204517 KIFAP3 1 0.08 0.1 7 5.72 90.92 28 5.29 No 23 0.95 Yes 0 0 No -25 0.58 No 47 70.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 169959233 - NM_001204517 KIFAP3 1 0.76 0.57 27 1.22 87.35 23 5.74 Yes 53 1.27 Yes 0 0 No -22 0.42 No 48 57.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 170008428 - NM_001204517 KIFAP3 1 0.18 0.19 14 -10.05 77.68 22 4.8 No 22 0.76 No 0 0 No -25 0.65 No 45 51.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 170010982 - NM_001204517 KIFAP3 1 0.36 0.42 22 4.53 85.37 20 4.55 No 7 0.2 No 20 0.82 Yes -20 0.67 Yes 50 63.69 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 170018873 - NM_001204517 KIFAP3 1 0.21 0.25 14 6.25 89.36 24 3.75 No 52 1.26 Yes 0 0 No -23 0.49 No 47 46.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145693668 + NM_145754 KIFC2 1 3.15 0.39 23 4 68.03 35 6.01 Yes 22 1.06 Yes 29 0.81 Yes -34 0.56 No 36 80.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 145697545 + NM_145754 KIFC2 1 2.14 0.19 12 -1.51 56.46 16 4.69 No 15 -1.46 No 0 0 No -55 0.64 No 15 55.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145697552 + NM_145754 KIFC2 1 1.14 0.14 9 0.37 0 17 3.72 No 22 -1.91 No 0 0 No -22 0.71 Yes 48 24.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 145697760 + NM_145754 KIFC2 1 2.38 0.15 9 5.61 90.12 23 5.1 No 10 1.14 Yes 0 0 No -22 0.96 Yes 48 97.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7796033 - NM_012311 KIN 1 2.37 1.75 58 4.76 88.94 45 5.95 Yes 32 0.43 No 44 0.37 Yes -30 0.5 No 26 55.28 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 7803411 - NM_012311 KIN 1 0.41 0.29 16 12.65 89.43 35 6.15 Yes 56 1.07 Yes 22 0.74 Yes -34 0.5 No 36 69.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 7820999 - NM_012311 KIN 1 1.27 0.68 29 3.12 76.53 42 5.8 Yes 76 1.06 Yes 23 0.89 Yes -35 0.74 Yes 35 85.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 7827207 - NM_012311 KIN 1 0.17 0.1 7 0.45 0 27 6.48 Yes 14 0.35 No 0 0 No -29 0.55 No 44 61.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 21135387 + NM_001276389 KIZ 1 0.54 0.15 11 7.95 88.44 28 10.05 Yes 70 1.26 Yes 0 0 No -22 0.33 No 48 36.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 21226562 + NM_001276389 KIZ 1 2.02 0.42 22 6.39 81.23 27 5.74 Yes 14 1.26 Yes 0 0 No -26 0.82 Yes 44 86.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104128428 + NM_001130107 KLC1 1 0.21 0.63 32 -9.96 0 9 3.87 No 74 1.13 Yes 0 0 No -50 0.31 No 20 15.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104129020 + NM_001130107 KLC1 1 0.24 0.42 21 -0.25 60.82 39 7.2 Yes 26 0.94 Yes 0 0 No -34 0.82 Yes 36 87.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104140543 + NM_001130107 KLC1 1 0.75 1.33 55 9.77 90.34 36 7.14 Yes 23 1.25 Yes 0 0 No -35 0.72 Yes 35 85.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104140771 + NM_001130107 KLC1 1 0.05 0.1 7 6.58 88.76 34 7.87 Yes 21 0.83 Yes 0 0 No -33 0.9 Yes 37 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104143796 + NM_001130107 KLC1 1 0.07 0.17 10 2.83 73.44 50 5.44 No 49 0.13 No 0 0 No -23 0.8 Yes 47 42.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104145645 + NM_001130107 KLC1 1 5.93 9.78 72 10.64 86.44 32 5.68 Yes 63 1.05 Yes 0 0 No -31 0.5 No 43 60.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104145744 + NM_001130107 KLC1 1 15.16 25.29 72 4.32 74.12 29 5.42 No 47 1.27 Yes 0 0 No -28 0.87 Yes 42 92.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104151322 + NM_001130107 KLC1 1 75.39 30.24 72 6.05 80.53 27 5.48 No 14 0.95 Yes 26 0.87 Yes -26 0.8 Yes 44 82.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 104151974 + NM_001130107 KLC1 1 0.95 0.43 23 11.43 93.71 34 8.3 Yes 21 0.77 Yes 33 0.91 Yes -33 0.94 Yes 37 97.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66026017 + NM_001134774 KLC2 1 35.17 9.08 72 4.26 76.8 30 7.72 Yes 22 -1.92 No 27 0.92 Yes -34 0.71 Yes 36 53.61 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 66030388 + NM_001134774 KLC2 1 0.91 0.67 34 4.29 79.86 19 7.92 Yes 59 -1.56 No 0 0 No -18 0.46 No 52 64.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 66030966 + NM_001134774 KLC2 1 0.12 0.1 7 0.86 70.62 17 3.6 No 4 -1.3 No 0 0 No -22 0.78 Yes 48 77.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66034641 + NM_001134774 KLC2 1 0.41 0.31 17 8.49 91.63 16 5.87 Yes 70 1.87 Yes 20 0.81 Yes -28 0.68 Yes 42 66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 43040478 + NM_201522 KLC4 1 1.07 0.18 13 7.6 91.82 26 5.39 No 40 -2.67 No 25 0.89 Yes -25 0.87 Yes 45 89.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 103664323 - NM_005655 KLF10 1 0.28 0.56 28 4.9 62.78 40 5.75 Yes 54 0.12 No 26 0.92 Yes -33 0.37 No 37 50.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 103665851 - NM_005655 KLF10 1 0.23 0.18 9 7.03 82.48 25 4.6 No 54 -3.45 No 0 0 No -24 0.89 Yes 46 82.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 74278340 - NM_007249 KLF12 1 4.34 0.99 42 8.69 89.7 21 4.9 No 35 -1.92 No 0 0 No -20 0.91 Yes 50 94.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 74280122 - NM_007249 KLF12 1 0.83 0.15 8 5.24 80.12 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.69 Yes 51 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 74354976 - NM_007249 KLF12 1 0.48 0.19 12 6.25 86.44 30 4.27 No 9 1.23 Yes 0 0 No -29 0.65 No 41 79.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 74506519 - NM_007249 KLF12 1 1.03 0.56 27 10.19 80.81 31 7.32 Yes 9 0.77 No 0 0 No -30 0.55 No 40 71.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 74513401 - NM_007249 KLF12 1 2.41 1.35 47 3.97 62.84 29 5.27 No 16 0.34 No 0 0 No -28 0.77 Yes 42 75.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 74519579 - NM_007249 KLF12 1 0.84 0.39 21 8.99 92.17 16 4.86 No 3 0.86 Yes 0 0 No -27 0.67 Yes 43 66.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 74526496 - NM_007249 KLF12 1 1.66 0.76 39 7.03 86.07 32 6.48 Yes 61 -0.85 No 0 0 No -32 0.87 Yes 38 89.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 74552968 - NM_007249 KLF12 1 1.53 0.81 35 3.73 79.85 22 4.9 No 9 0.9 Yes 0 0 No -21 0.86 Yes 49 76.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 74567342 - NM_007249 KLF12 1 1.67 0.92 37 5.31 84.17 27 5.2 No 31 0.7 No 0 0 No -26 0.4 No 44 45.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 38689583 + NM_016531 KLF3 1 1.21 0.57 23 0.98 68.9 19 4.69 No 6 0.57 No 0 0 No -18 0.86 Yes 52 73.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 3825474 - NM_001300 KLF6 1 0.77 0.82 37 10.84 92.68 30 7.17 Yes 17 1.1 Yes 29 0.79 Yes -29 0.35 No 35 47.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 129722549 + NM_014997 KLHDC10 1 4.78 0.21 13 8.61 92.75 20 6.63 Yes 7 0.69 No 0 0 No -27 0.9 Yes 43 93.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 129734734 + NM_014997 KLHDC10 1 3.43 0.19 10 8.71 84.78 14 4.89 No 68 1.18 Yes 24 0.42 Yes -24 0.6 No 46 47.19 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 129757358 + NM_014997 KLHDC10 1 3.79 2.11 58 8.85 80.9 33 5.61 Yes 12 1.28 Yes 24 0.87 Yes -24 0.45 No 46 53.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 42984875 + NM_057161 KLHDC3 1 0.14 0.17 10 -2.24 0 34 6.32 Yes 49 -2.52 No 0 0 No -33 0.84 Yes 37 74.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 42986085 + NM_057161 KLHDC3 1 0.22 0.35 19 2.54 0 37 7.48 Yes 24 2.63 Yes 0 0 No -36 0.67 Yes 34 91.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 87741679 - NM_017566 KLHDC4 1 39.21 14.39 72 0.31 67.11 43 10.21 Yes 30 1.44 Yes 23 0.91 Yes -42 0.73 Yes 28 81.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 87742065 - NM_017566 KLHDC4 1 0.57 0.28 17 -4.72 0 12 4.12 No 27 1.82 Yes 0 0 No -39 0.88 Yes 31 92.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 87742155 - NM_017566 KLHDC4 1 1.87 0.85 31 4.16 80.47 21 4.51 No 30 -3.71 No 21 0.89 Yes -21 0.92 Yes 49 89.07 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 87744039 - NM_017566 KLHDC4 1 0.18 0.17 9 5.95 80.94 35 6.08 Yes -2 0.42 No 0 0 No -34 0.6 No 36 79.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 87762971 - NM_017566 KLHDC4 1 1.79 1.58 55 8.24 85.4 34 5.45 No 21 0.52 No 33 0.72 Yes -33 0.73 Yes 37 82.97 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 87764266 - NM_017566 KLHDC4 1 3.7 1.69 48 -7.99 0 15 4.36 No 2 0.6 No 0 0 No -23 0.64 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 87770704 - NM_017566 KLHDC4 1 0.28 0.14 8 7.21 95.43 36 7.41 Yes 66 2.17 Yes 0 0 No -35 0.97 Yes 35 97.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 87780881 - NM_017566 KLHDC4 1 0.57 0.26 16 6.43 80.76 32 6.16 Yes 71 1.24 Yes 0 0 No -31 0.92 Yes 39 96.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 87784203 - NM_017566 KLHDC4 1 0.2 0.13 7 5.48 84.13 33 5.83 Yes 54 0.51 No 0 0 No -27 0.81 Yes 43 58.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 87795643 - NM_017566 KLHDC4 1 1.68 0.93 43 -3.68 0 30 6.18 Yes 17 1.37 Yes 25 0.95 Yes -29 0.97 Yes 41 94.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 87795757 - NM_017566 KLHDC4 1 0.61 0.33 19 5.36 78.43 9 5.1 No 17 -2.2 No 25 0.77 Yes -21 0.31 No 45 39.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 87798947 - NM_017566 KLHDC4 1 0.85 0.47 26 4.5 81.71 32 6.27 Yes 10 1.41 Yes 22 0.89 Yes -32 0.47 No 38 70.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 202861786 - NM_001303051 KLHL12 1 0.17 0.14 8 -9.98 0 37 6.82 Yes 24 2.28 Yes 0 0 No -32 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 202862473 - NM_001303051 KLHL12 1 0.46 0.53 28 7.8 78.86 31 5.47 No 45 1.08 Yes 0 0 No -23 0.82 Yes 47 77.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 202862548 - NM_001303051 KLHL12 1 0.62 0.75 36 1.06 0 9 3.87 No 13 1.86 Yes 0 0 No -25 0.78 Yes 45 88.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 202863876 - NM_001303051 KLHL12 1 0.12 0.13 9 -16.11 0 32 5.91 Yes 19 0.77 Yes 0 0 No -31 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 202880362 - NM_001303051 KLHL12 1 0.15 0.21 13 -3.19 57.93 14 3.97 No 68 -4.56 No 0 0 No -13 0.58 No 57 45.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 202883991 - NM_001303051 KLHL12 1 3.36 4.5 72 10.62 88.27 29 5.65 Yes 71 0.92 Yes 0 0 No -28 0.56 No 42 72.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 202884901 - NM_001303051 KLHL12 1 3.33 4.47 71 8.01 94.72 20 5.39 No 7 1.32 Yes 0 0 No -30 0.77 Yes 40 69.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 24042796 - NM_030624 KLHL15 1 0.77 0.15 9 8.17 95.2 15 4.61 No 2 0.61 No 0 0 No -31 0.89 Yes 39 88.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 897665 + NM_198317 KLHL17 1 26.17 0.96 42 7.39 78.55 15 5.99 Yes 2 2.43 Yes 0 0 No -29 0.81 Yes 41 83.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 897995 + NM_198317 KLHL17 1 7.13 0.42 23 1.24 77.92 21 4.8 No 58 0.24 No 0 0 No -20 0.88 Yes 50 76.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 898411 + NM_198317 KLHL17 1 50.03 3.1 67 10.7 85.52 27 6.4 Yes 14 2.33 Yes 26 0.95 Yes -26 0.88 Yes 44 91.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 900314 + NM_198317 KLHL17 1 1.3 0.17 9 8.26 84.43 22 4.52 No 54 0.61 No 18 0.9 Yes -29 0.56 No 41 82.98 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 47324870 + NM_025010 KLHL18 1 1.12 0.75 34 9.07 90.15 26 5.48 No 13 1.1 Yes 0 0 No -25 0.74 Yes 45 73.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47328709 + NM_025010 KLHL18 1 28.93 18.68 72 9.95 93.79 98 7.69 Yes 22 1.79 Yes 34 0.84 Yes -34 0.92 Yes 36 93.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 47329437 + NM_025010 KLHL18 1 0.22 0.15 9 5.48 84.29 49 5.95 Yes 36 0.44 No 0 0 No -26 0.95 Yes 44 96.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47338962 + NM_025010 KLHL18 1 0.34 0.25 10 9.64 97.49 25 5.57 Yes 60 2.02 Yes 0 0 No -28 0.69 Yes 46 71.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47339038 + NM_025010 KLHL18 1 0.24 0.17 12 0.29 79.77 30 5.03 No 5 1.7 Yes 30 0.67 Yes -23 0.62 No 47 65.5 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 47339067 + NM_025010 KLHL18 1 0.48 0.31 17 5.57 74.92 24 4.12 No 34 1.66 Yes 0 0 No -46 0.4 No 52 82.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 47348401 + NM_025010 KLHL18 1 0.31 0.24 12 11.01 83.76 23 5.3 No 26 1.13 Yes 0 0 No -22 0.79 Yes 48 74.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47378009 + NM_025010 KLHL18 1 36 14.06 72 1.49 71.48 34 5.94 Yes 21 0.74 No 20 0.81 Yes -33 0.73 Yes 37 81.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 47382046 + NM_025010 KLHL18 1 1.25 0.92 38 0.73 67.89 15 5.74 Yes 55 0.32 No 19 0.8 Yes -14 0.54 No 56 43.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 166139176 + NM_001331023 KLHL2 1 0.91 0.29 13 9.28 81.76 36 6.54 Yes 23 1.76 Yes 0 0 No -25 0.8 Yes 45 52.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 166140795 + NM_001331023 KLHL2 1 0.43 0.14 7 3.07 86.04 25 4.88 No 57 -4.23 No 25 0.52 Yes -25 0.58 No 46 67.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 166217255 + NM_001331023 KLHL2 1 0.4 0.24 12 7.31 83.81 23 5.09 No 61 1.49 Yes 0 0 No -22 0.47 No 50 65.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 166242463 + NM_001331023 KLHL2 1 18.24 9.97 72 8.13 81.98 28 6.05 Yes 29 1.15 Yes 28 0.62 Yes -27 0.76 Yes 43 79.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 173684661 + NM_014458 KLHL20 1 35.91 6.01 69 6.85 71.58 35 5.04 No 65 -2.75 No 27 0.73 Yes -27 0.68 Yes 43 85.5 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 173691870 + NM_014458 KLHL20 1 1.42 0.51 28 7.85 96.24 28 5.29 No 33 1.16 Yes 0 0 No -27 0.89 Yes 43 82.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 173694368 + NM_014458 KLHL20 1 0.7 0.21 12 7.72 85.04 35 6 Yes 26 0.79 Yes 0 0 No -34 0.47 No 36 67.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 173694403 + NM_014458 KLHL20 1 1.11 0.36 18 1.94 76.66 22 4.12 No 61 0.76 No 0 0 No -19 0.47 No 49 61.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 173694842 + NM_014458 KLHL20 1 0.64 0.24 15 -0.53 0 15 4.34 No 67 0.29 No 0 0 No -14 0.67 Yes 56 59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 173722544 + NM_014458 KLHL20 1 0.3 0.1 7 7.6 88.21 63 7.97 Yes 50 1.23 Yes 0 0 No -34 0.59 No 36 78.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 173725936 + NM_014458 KLHL20 1 0.21 0.1 7 4.83 85.15 13 5.31 No 0 1.69 Yes 0 0 No -18 0.4 No 52 40.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 173743974 + NM_014458 KLHL20 1 0.53 0.21 11 7.7 93.24 37 7.79 Yes 53 -1.1 No 0 0 No -36 0.73 Yes 34 85.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6654171 - NM_014851 KLHL21 1 0.95 0.25 14 10.74 88.26 22 5.29 No 64 -2.18 No 21 0.65 Yes -21 0.47 No 49 66.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 20810755 - NM_032775 KLHL22 1 5.99 1.22 48 6.48 82.87 24 5.2 No 11 -0.06 No 23 0.96 Yes -23 0.93 Yes 47 86.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 20819911 - NM_032775 KLHL22 1 0.92 0.21 12 11.35 82.57 21 6.78 Yes 8 0.26 No 23 0.41 Yes -39 0.42 No 47 73.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 20838394 - NM_032775 KLHL22 1 3.74 0.54 28 7.69 80.02 33 6.24 Yes 20 1.4 Yes 32 0.75 Yes -32 0.87 Yes 38 88.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 20843500 - NM_032775 KLHL22 1 18.04 1.78 56 3.55 84.03 21 5.2 No 64 2.01 Yes 21 0.85 Yes -21 0.62 No 49 67.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 183361873 + NM_017644 KLHL24 1 1.14 0.14 10 7.14 93.85 26 5.1 No 53 1.62 Yes 25 0.9 Yes -25 0.72 Yes 45 39.65 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 183384901 + NM_017644 KLHL24 1 3.44 0.38 20 14.63 92.68 31 5.83 Yes 46 1.78 Yes 0 0 No -30 0.88 Yes 40 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18778386 + NM_001345983 KLHL26 1 1.25 0.24 13 11.31 92.32 58 7.48 Yes 42 0.62 No 42 0.05 Yes -57 0.29 No 43 50.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 45407016 - NM_001308112 KLHL28 1 7.73 2.13 57 9.62 87.85 35 6.4 Yes 57 0.18 No 0 0 No -24 0.55 No 48 61.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 23913177 + NM_052920 KLHL29 1 4.45 0.33 18 10.29 91.64 28 5.48 No 15 0.62 No 0 0 No -27 0.91 Yes 43 95.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 136965334 - NM_001257195 KLHL3 1 3.47 0.18 11 3.37 82.3 23 6.45 Yes 10 0.71 No 0 0 No -22 0.82 Yes 48 73.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 137007642 - NM_001257195 KLHL3 1 1.99 0.24 13 9.99 98.16 21 6.22 Yes 8 1.2 Yes 24 0.88 Yes -24 0.72 Yes 46 80.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 137013134 - NM_001257195 KLHL3 1 3.14 0.25 15 4.18 83.78 28 5.83 Yes 15 0.68 No 0 0 No -25 0.56 No 45 68.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 137020764 - NM_001257195 KLHL3 1 1.86 0.15 8 8.54 83.28 24 4.96 No 22 0.99 Yes 0 0 No -23 0.72 Yes 47 51.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 27934703 + NM_020782 KLHL42 1 3.1 0.9 32 8.99 81.58 38 7.3 Yes 52 1.26 Yes 0 0 No -37 0.92 Yes 33 94.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27940971 + NM_020782 KLHL42 1 2.17 0.6 28 10.61 75.43 26 7.42 Yes 13 2.59 Yes 0 0 No -25 0.86 Yes 45 89.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27950179 + NM_020782 KLHL42 1 8.12 3.01 62 8.31 78.69 29 7.1 Yes 9 1.54 Yes 28 0.86 Yes -28 0.53 No 42 75.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 27950183 + NM_020782 KLHL42 1 0.61 0.25 13 1.31 0 33 7.34 Yes 13 1.54 Yes 0 0 No -26 0.55 No 38 62.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39083644 + NM_015990 KLHL5 1 0.52 0.31 18 4.41 86.16 23 4.78 No 74 1.37 Yes 0 0 No -16 0.43 No 52 44.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 183234585 - NM_130446 KLHL6 1 0.48 0.11 7 5.61 77.35 28 5.18 No 50 0.45 No 0 0 No -21 0.48 No 51 35.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 183240925 - NM_130446 KLHL6 1 2.05 0.5 28 6.8 76.93 30 5.74 Yes 17 1.44 Yes 29 0.82 Yes -29 0.92 Yes 41 95.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 183244884 - NM_130446 KLHL6 1 0.35 0.1 7 10.22 87.82 50 8.63 Yes 37 1.35 Yes 0 0 No -49 0.47 No 23 58.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 23157452 + NM_001031710 KLHL7 1 14.06 4.94 70 8.55 90.14 32 5.76 Yes 8 0.93 Yes 31 0.9 Yes -31 0.93 Yes 39 87.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 23169182 + NM_001031710 KLHL7 1 2.15 0.53 29 5.94 75.83 21 4.76 No 8 0.6 No 0 0 No -20 0.6 No 42 54.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 23186733 + NM_001031710 KLHL7 1 1.78 0.5 27 10.86 88.27 29 9.47 Yes 16 1.61 Yes 0 0 No -28 0.71 Yes 42 83.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 23195609 + NM_001031710 KLHL7 1 10.47 2.51 62 6.55 85.49 32 6.59 Yes 19 1.72 Yes 31 0.75 Yes -31 0.86 Yes 39 91.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 88139340 - NR_120447 KLHL8 1 1.25 0.29 16 9.07 87.19 16 7.21 Yes 28 0.77 No 0 0 No -28 0.69 Yes 42 81.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 51322502 - NM_002257 KLK1 1 1.91 2.28 59 4.46 81.62 20 5 No 7 0.78 Yes 0 0 No -19 0.53 No 51 52.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 51323280 - NM_002257 KLK1 1 0.09 0.19 9 5.07 0 9 4.58 No 37 -0.66 No 0 0 No -37 0.91 Yes 33 92.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 241699762 + NM_003679 KMO 1 1.66 0.67 31 5.72 77.79 15 4.8 No -1 1.22 Yes 31 0.69 Yes -31 0.79 Yes 39 90.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 241699771 + NM_003679 KMO 1 1.8 0.85 32 4.07 0 12 4.24 No 8 1.19 Yes 31 0.69 Yes -20 0.43 No 50 46.89 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 241713311 + NM_003679 KMO 1 0.49 0.21 12 8.6 83.56 29 6.65 Yes 16 0.32 No 0 0 No -28 0.62 No 42 46.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 241744800 + NM_003679 KMO 1 1.34 0.6 16 7.79 78.5 26 4.96 No 47 0.48 No 0 0 No -25 0.8 Yes 45 77.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 241751078 + NM_003679 KMO 1 0.9 0.44 22 10.3 88.97 32 7.55 Yes 19 0.6 No 0 0 No -31 0.45 No 36 48.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 241752074 + NM_003679 KMO 1 0.57 0.28 16 7.17 77.1 34 4.42 No 17 0.52 No 0 0 No -29 0.85 Yes 41 96.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 241753352 + NM_003679 KMO 1 8.14 3.44 65 6 86.74 20 4.92 No 7 0.26 No 19 0.87 Yes -24 0.7 Yes 46 61.61 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 241753355 + NM_003679 KMO 1 0.73 0.38 19 -0.99 78.92 23 5.21 No 10 0.25 No 0 0 No -22 0.64 No 43 62.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118309738 + NM_001197104 KMT2A 1 14.8 3.83 69 5.8 78.92 26 5.16 No 53 0.04 No 25 0.8 Yes -25 0.68 Yes 45 63.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 118318339 + NM_001197104 KMT2A 1 3.8 0.97 42 10.62 87.6 26 5.08 No 24 1.54 Yes 25 0.87 Yes -25 0.83 Yes 45 95.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 118344893 + NM_001197104 KMT2A 1 3.32 3.38 68 9.79 81.57 22 6.11 Yes 9 0.74 No 21 0.43 Yes -35 0.4 No 40 47.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 118355579 + NM_001197104 KMT2A 1 0.98 0.67 33 -3.04 77.01 22 5.58 Yes 72 1.65 Yes 0 0 No -25 0.81 Yes 45 86.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118360509 + NM_001197104 KMT2A 1 3.62 3.22 67 3.8 88.83 43 5.66 Yes 25 0.84 Yes 0 0 No -31 0.91 Yes 39 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118362491 + NM_001197104 KMT2A 1 1.03 0.17 10 4.66 78.15 22 5.29 No -3 0.41 No 0 0 No -24 0.69 Yes 49 44.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 118363827 + NM_001197104 KMT2A 1 0.72 0.68 33 4.41 81.48 12 4.9 No 76 -1.61 No 0 0 No -22 0.3 No 51 26.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118366417 + NM_001197104 KMT2A 1 0.71 0.57 24 1.1 83.73 31 5.79 Yes 18 0.55 No 0 0 No -34 0.53 No 36 43.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118366472 + NM_001197104 KMT2A 1 0.94 0.75 38 1.15 71.41 18 5.93 Yes 73 0.56 No 0 0 No -22 0.7 Yes 48 58.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 118367438 + NM_001197104 KMT2A 1 1.63 1.26 44 7.03 84.47 22 4.99 No 65 0.44 No 0 0 No -21 0.84 Yes 49 69.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 118372390 + NM_001197104 KMT2A 1 0.19 0.18 12 -2.69 0 28 5.4 No 65 1.57 Yes 0 0 No -27 0.56 No 43 72.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 118373116 + NM_001197104 KMT2A 1 0.12 0.11 7 -1.33 0 28 5.59 Yes 50 0.86 Yes 0 0 No -27 0.8 Yes 43 69.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 36210748 + NM_014727 KMT2B 1 0.27 0.13 8 6.28 74.22 31 5.89 Yes 18 0.15 No 0 0 No -30 0.44 No 42 43.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36210751 + NM_014727 KMT2B 1 5.27 2.1 59 7.96 83.88 34 6.12 Yes 21 0.13 No 0 0 No -33 0.39 No 39 43.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36213233 + NM_014727 KMT2B 1 0.53 0.28 17 7.25 83.62 40 4.88 No -3 0.69 No 0 0 No -28 0.68 Yes 37 78.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36214304 + NM_014727 KMT2B 1 1.39 0.99 39 10.57 86.91 16 5.15 No 56 1.33 Yes 0 0 No -22 0.68 Yes 48 66.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 36214633 + NM_014727 KMT2B 1 0.17 0.13 9 8.57 82.41 19 5 No 6 1.15 Yes 21 0.82 Yes -22 0.58 No 48 65.21 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 36215539 + NM_014727 KMT2B 1 1.63 0.82 37 -1.81 73.94 31 5.87 Yes 18 1.72 Yes 0 0 No -25 0.82 Yes 45 71.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36219264 + NM_014727 KMT2B 1 1.1 0.61 34 8.43 93.04 25 5.47 No 39 -1.68 No 0 0 No -25 0.45 No 43 54.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36219893 + NM_014727 KMT2B 1 0.16 0.1 7 3.57 0 11 4.12 No 29 1.07 Yes 0 0 No -35 0.92 Yes 35 92.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36220062 + NM_014727 KMT2B 1 0.47 0.25 14 -7.79 78.46 69 6.33 Yes 56 0.69 No 0 0 No -26 0.93 Yes 44 83.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36220089 + NM_014727 KMT2B 1 0.76 0.4 23 1.97 72.38 33 6 Yes 41 -0.01 No 0 0 No -53 0.67 Yes 17 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36220308 + NM_014727 KMT2B 1 0.25 0.14 9 6.77 91.09 33 5.6 Yes 25 0.95 Yes 0 0 No -32 0.63 No 38 82.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 36220692 + NM_014727 KMT2B 1 0.16 0.1 7 6.33 79.56 16 4.75 No 24 1.07 Yes 0 0 No -28 0.47 No 39 63.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36222319 + NM_014727 KMT2B 1 0.91 0.32 15 0.72 84.64 16 3.88 No 46 -3.54 No 0 0 No -16 0.65 No 51 58.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36224649 + NM_014727 KMT2B 1 0.81 0.42 22 12.24 87.6 42 6.53 Yes 47 0.04 No 0 0 No -26 0.49 No 43 67.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36228489 + NM_014727 KMT2B 1 1.14 0.69 36 6.77 78.27 38 5.99 Yes 25 0.67 No 0 0 No -23 0.45 No 33 42.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151842293 - NM_170606 KMT2C 1 0.14 0.15 9 9.55 85.22 32 9.04 Yes -3 1.14 Yes 0 0 No -31 0.94 Yes 39 96.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151844765 - NM_170606 KMT2C 1 0.5 0.25 12 7.44 93.95 28 5.29 No 74 0.2 No 0 0 No -27 0.67 Yes 43 38.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 151849981 - NM_170606 KMT2C 1 0.36 0.32 19 6.44 72.96 29 6.13 Yes 72 0.54 No 0 0 No -28 0.74 Yes 42 55.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 151853357 - NM_170606 KMT2C 1 2.14 0.13 9 -0.09 67.68 60 8.35 Yes 47 0.61 No 0 0 No -25 0.3 No 19 56.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151853360 - NM_170606 KMT2C 1 8 0.49 23 4.65 78.66 57 8.17 Yes 44 0.62 No 24 0.51 Yes -48 0.32 No 46 32.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 151853429 - NM_170606 KMT2C 1 10.38 0.74 37 3.95 80.39 29 6.31 Yes 51 -1.8 No 0 0 No -33 0.45 No 37 56.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151854940 - NM_170606 KMT2C 1 40.56 2.94 63 6.02 83.54 30 5.76 Yes 17 0.31 No 0 0 No -29 0.64 No 41 69.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151855008 - NM_170606 KMT2C 1 254.36 17.83 72 4.24 87.4 50 5.4 No 37 1.07 Yes 0 0 No -27 0.54 No 43 57.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 151855011 - NM_170606 KMT2C 1 546.9 38.65 72 6.4 78.8 47 5.26 No 34 1.07 Yes 24 0.61 Yes -24 0.54 No 46 56.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 151857687 - NM_170606 KMT2C 1 1.49 1.33 52 8.43 79.99 27 7.56 Yes -4 0.4 No 0 0 No -29 0.33 No 41 25.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151866280 - NM_170606 KMT2C 1 0.18 0.17 9 4.77 81.64 22 5.92 Yes 60 0.46 No 0 0 No -21 0.83 Yes 49 89.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 151880429 - NM_170606 KMT2C 1 0.11 0.11 8 5.7 76.85 31 5.43 No -3 0.07 No 0 0 No -25 0.71 Yes 45 70.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 151881155 - NM_170606 KMT2C 1 0.33 0.29 19 4.74 84.41 25 6.95 Yes 36 1.27 Yes 0 0 No -24 0.75 Yes 46 69.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 151884548 - NM_170606 KMT2C 1 0.22 0.26 17 -3.53 59.21 17 4.32 No 37 -1.63 No 0 0 No -35 0.57 No 35 54.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151885183 - NM_170606 KMT2C 1 0.09 0.1 7 7.4 86.41 35 6.4 Yes 72 0.37 No 0 0 No -35 0.48 No 36 67.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151891212 - NM_170606 KMT2C 1 0.44 0.32 20 -1.64 78.61 34 6.84 Yes 21 0.96 Yes 0 0 No -33 0.74 Yes 37 71.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151891652 - NM_170606 KMT2C 1 0.16 0.17 9 -9.22 0 39 6.66 Yes 26 0.56 No 0 0 No -33 0.35 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151892655 - NM_170606 KMT2C 1 0.61 0.63 35 7.7 84.11 97 8.67 Yes 39 1.55 Yes 0 0 No -29 0.68 Yes 38 80.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151904511 - NM_170606 KMT2C 1 3.98 2.68 68 2.38 85.66 16 6.32 Yes 3 0.19 No 0 0 No -23 0.52 No 37 68.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 151983459 - NM_170606 KMT2C 1 0.14 0.18 12 6.01 83.25 33 6.18 Yes 47 1.03 Yes 0 0 No -32 0.73 Yes 38 69.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 151983462 - NM_170606 KMT2C 1 1.11 1.46 54 7.73 90.76 30 5.94 Yes 44 1.03 Yes 0 0 No -29 0.74 Yes 41 68.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 151993515 - NM_170606 KMT2C 1 0.27 0.32 19 4.46 84.41 51 7.15 Yes 72 -2.2 No 0 0 No -45 0.57 No 25 69.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152009030 - NM_170606 KMT2C 1 0.09 0.11 8 -2.47 82.22 27 5.02 No 14 0.58 No 0 0 No -26 0.82 Yes 44 93.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152010058 - NM_170606 KMT2C 1 0.18 0.22 16 9.1 84.73 28 9.62 Yes 15 1.23 Yes 0 0 No -27 0.89 Yes 43 84.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152027828 - NM_170606 KMT2C 1 16.3 10.18 72 2.78 75.64 31 7.66 Yes 18 1.52 Yes 30 0.6 Yes -30 0.9 Yes 40 88.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 152041341 - NM_170606 KMT2C 1 0.75 0.43 25 8.38 94.05 46 5.21 No 63 -3.67 No 0 0 No -27 0.68 Yes 43 80.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49416581 - NM_003482 KMT2D 1 1.19 0.81 37 1.63 75.51 27 5 No 25 -1.01 No 0 0 No -26 0.91 Yes 44 40.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 49416641 - NM_003482 KMT2D 1 0.17 0.11 8 3.24 71.42 28 5.2 No 45 0.22 No 0 0 No -39 0.71 Yes 31 84.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49417884 - NM_003482 KMT2D 1 19.31 13.04 72 7.72 81.94 19 5.74 Yes 31 0.43 No 26 0.67 Yes -26 0.74 Yes 44 72.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49418521 - NM_003482 KMT2D 1 0.22 0.17 9 0.02 61.67 32 6 Yes 5 0.82 Yes 25 0.93 Yes -31 0.52 No 53 38.88 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 49420874 - NM_003482 KMT2D 1 0.51 0.35 19 1.23 69.93 33 6.19 Yes 20 1.88 Yes 0 0 No -32 0.81 Yes 38 79.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49424154 - NM_003482 KMT2D 1 2.33 1.22 47 0.77 70.28 57 6.4 Yes 44 1.33 Yes 0 0 No -56 0.34 No 22 61.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49424157 - NM_003482 KMT2D 1 3.07 1.65 56 4.49 74.72 54 6.25 Yes 41 1.34 Yes 0 0 No -45 0.36 No 25 59.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49424810 - NM_003482 KMT2D 1 0.19 0.15 9 -2.92 0 10 4 No 73 -3.61 No 0 0 No -27 0.79 Yes 43 60.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 49428275 - NM_003482 KMT2D 1 0.32 0.18 13 -0.07 77.77 16 4.46 No 0 0.74 No 20 0.87 Yes -26 0.53 No 15 57.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 49428278 - NM_003482 KMT2D 1 0.28 0.13 9 -1.32 67.85 13 4.97 No -3 0.9 Yes 20 0.87 Yes -23 0.46 No 18 52.03 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 49429801 - NM_003482 KMT2D 1 0.22 0.14 8 4.5 87.33 35 4.88 No 66 1.12 Yes 23 0.56 Yes -30 0.75 Yes 40 60.05 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 49432706 - NM_003482 KMT2D 1 0.31 0.18 11 8.44 83.08 36 5.62 Yes 75 1.1 Yes 26 0.72 Yes -35 0.54 No 35 58.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 49435226 - NM_003482 KMT2D 1 1.74 1.31 47 9.16 81.9 36 6.85 Yes 23 1.92 Yes 0 0 No -35 0.64 No 35 54.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49435316 - NM_003482 KMT2D 1 2.31 1.79 56 4.54 84.94 33 6.71 Yes 20 2.12 Yes 0 0 No -32 0.84 Yes 38 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49435483 - NM_003482 KMT2D 1 0.15 0.1 7 -4.19 0 9 3.87 No 17 0.99 Yes 0 0 No -29 0.88 Yes 41 87.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49435885 - NM_003482 KMT2D 1 0.36 0.19 12 3.65 74.89 41 7.6 Yes 28 1.49 Yes 0 0 No -23 0.49 No 47 77.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 49436093 - NM_003482 KMT2D 1 6.08 3.49 67 -0.03 64.28 24 5.1 No 31 1.55 Yes 0 0 No -43 0.76 Yes 27 88.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49444602 - NM_003482 KMT2D 1 0.22 0.19 11 1.08 65.51 27 6.32 Yes 65 0.07 No 30 0.89 Yes -26 0.75 Yes 44 71.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49446425 - NM_003482 KMT2D 1 0.2 0.24 14 3.07 70.73 34 6.08 Yes 21 -0.41 No 0 0 No -33 0.93 Yes 37 88.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49446479 - NM_003482 KMT2D 1 0.12 0.13 8 6.63 88.51 9 4.8 No -4 0.24 No 0 0 No -42 0.37 No 54 49.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 49448323 - NM_003482 KMT2D 1 0.55 0.21 14 6.2 73.69 17 4.58 No 4 0.88 Yes 0 0 No -24 0.82 Yes 46 64.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 104678831 + NM_182931 KMT2E 1 7.95 2.28 63 2.21 84.41 20 7.59 Yes 7 1.15 Yes 22 0.74 Yes -22 0.77 Yes 48 83.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 104679599 + NM_182931 KMT2E 1 1.62 0.44 23 5.64 79.84 24 5.83 Yes 11 1.77 Yes 23 0.89 Yes -23 0.79 Yes 47 85.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 104685248 + NM_182931 KMT2E 1 0.27 0.38 26 6.28 73.19 25 5.48 No 12 0.57 No 0 0 No -24 0.83 Yes 46 70.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 104704474 + NM_182931 KMT2E 1 2.97 2.75 64 5.38 81.9 35 7.45 Yes 22 1.92 Yes 26 0.93 Yes -26 0.8 Yes 44 72.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 104708921 + NM_182931 KMT2E 1 1.06 1.26 52 8.06 85.05 33 7.19 Yes 57 1.06 Yes 0 0 No -27 0.62 No 38 51.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 104708925 + NM_182931 KMT2E 1 0.16 0.18 13 3.45 0 37 7.45 Yes 61 1.05 Yes 0 0 No -31 0.63 No 39 44.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 104717712 + NM_182931 KMT2E 1 0.11 0.18 13 -6.02 44.18 26 4.28 No 31 0.19 No 25 0.76 Yes -44 0.55 No 26 31.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 104729672 + NM_182931 KMT2E 1 0.25 0.26 13 6.04 85.43 30 8.52 Yes 17 1.52 Yes 0 0 No -29 0.8 Yes 41 89.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 104746949 + NM_182931 KMT2E 1 0.12 0.15 11 7.56 87.1 20 4.71 No 70 1.36 Yes 23 0.97 Yes -20 0.82 Yes 50 61.99 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 104748990 + NM_182931 KMT2E 1 0.98 0.93 42 5.81 82.88 27 6.71 Yes 14 1.08 Yes 26 0.8 Yes -26 0.8 Yes 44 82.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 123880893 + NM_001324506 KMT5A 1 0.1 0.13 8 -3.94 71.81 36 6.99 Yes 23 1.69 Yes 0 0 No -29 0.78 Yes 35 76.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123889185 + NM_001324506 KMT5A 1 0.47 0.63 33 7.67 83.73 18 4.57 No 5 1.31 Yes 0 0 No -27 0.94 Yes 43 97.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67933416 - NM_001300907 KMT5B 1 8.39 4.72 72 7.21 87.89 27 5.99 Yes 58 0.97 Yes 27 0.76 Yes -24 0.6 No 44 65.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 67933456 - NM_001300907 KMT5B 1 0.85 0.46 24 11.29 85.69 28 5.35 No 18 0.99 Yes 27 0.76 Yes -30 0.66 No 40 74.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 67933870 - NM_001300907 KMT5B 1 0.34 0.18 10 4.63 79.76 24 6.54 Yes 76 -5.69 No 0 0 No -23 0.85 Yes 47 86.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 67938764 - NM_001300907 KMT5B 1 1.26 0.68 34 10.23 87.13 33 4.13 No 4 0.59 No 32 0.85 Yes -32 0.58 No 38 84.97 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 67939124 - NM_001300907 KMT5B 1 0.45 0.39 23 5.18 76.52 43 6.08 Yes 70 0.56 No 0 0 No -29 0.6 No 41 49.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67941678 - NM_001300907 KMT5B 1 0.25 0.17 9 8.19 86.73 40 6.83 Yes 27 1.47 Yes 31 0.94 Yes -31 0.9 Yes 39 89.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 55853646 + NM_032701 KMT5C 1 0.81 0.1 7 -1.3 0 26 5.66 Yes 13 -0.36 No 0 0 No -25 0.96 Yes 45 86.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40891026 + NM_170589 KNL1 1 0.35 0.22 12 1.92 0 35 5.98 Yes 53 1.52 Yes 0 0 No -34 0.79 Yes 36 77.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40895117 + NM_170589 KNL1 1 0.27 0.15 10 -4.71 0 26 6.09 Yes 23 1.21 Yes 0 0 No -35 0.65 No 35 79.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40896790 + NM_170589 KNL1 1 0.9 0.67 32 5.13 73.11 34 5.02 No 14 0 No 0 0 No -26 0.75 Yes 44 78.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40905824 + NM_170589 KNL1 1 0.23 0.15 11 1.75 81.93 35 4.86 No 28 0.51 No 0 0 No -40 0.41 No 36 64.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40921521 + NM_170589 KNL1 1 0.45 0.32 20 8.46 94.73 25 5.13 No 65 0.63 No 24 0.75 Yes -25 0.53 No 45 69.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 40938035 + NM_170589 KNL1 1 0.31 0.25 10 5.17 73.46 24 6.14 Yes -2 0.68 No 0 0 No -23 0.78 Yes 47 70.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40942974 + NM_170589 KNL1 1 0.29 0.21 10 3.71 96.34 20 4.98 No 68 1.52 Yes 0 0 No -19 0.67 Yes 51 62.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40951601 + NM_170589 KNL1 1 0.38 0.28 17 6.28 90.27 17 5.81 Yes 4 1.17 Yes 0 0 No -29 0.51 No 41 60.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40954276 + NM_170589 KNL1 1 0.15 0.17 11 0.25 0 23 5.86 Yes 10 1.73 Yes 0 0 No -26 0.63 No 44 63.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 19728808 - NM_001012991 KNOP1 1 3.02 1.11 42 7.78 91.83 38 7 Yes 25 0.35 No 0 0 No -37 0.54 No 33 63.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40676657 + NM_001142761 KNSTRN 1 0.89 0.75 35 9.11 84.85 32 6.61 Yes 19 0.73 No 32 0.94 Yes -32 0.84 Yes 38 81.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40678605 + NM_001142761 KNSTRN 1 0.96 0.79 34 5.17 83.59 20 4.9 No 45 0.86 Yes 19 0.91 Yes -19 0.82 Yes 51 86.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40681366 + NM_001142761 KNSTRN 1 0.34 0.4 23 10.33 87.64 38 6.08 Yes 25 1.13 Yes 23 0.48 Yes -37 0.43 No 47 65.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 40681689 + NM_001142761 KNSTRN 1 0.41 0.44 22 2.98 77.71 24 7.87 Yes 11 1.92 Yes 23 0.92 Yes -23 0.82 Yes 47 69.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40684159 + NM_001142761 KNSTRN 1 0.22 0.24 16 -0.27 0 13 4.36 No 53 0.85 Yes 0 0 No -28 0.52 No 42 63.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 123035988 + NM_014708 KNTC1 1 1.03 0.94 42 -5.14 0 21 4.47 No 60 0.23 No 20 0.77 Yes -20 0.53 No 50 45.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 123049203 + NM_014708 KNTC1 1 3.55 2.71 66 8.25 81.13 23 7.31 Yes 10 1.32 Yes 0 0 No -22 0.86 Yes 48 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123052868 + NM_014708 KNTC1 1 0.73 0.64 29 5.83 92.16 24 4.52 No 76 1.9 Yes 0 0 No -18 0.66 No 52 83.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 123057487 + NM_014708 KNTC1 1 1.16 1.46 53 -0.37 0 67 6.07 Yes 54 1.73 Yes 0 0 No -28 0.75 Yes 42 70.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123058168 + NM_014708 KNTC1 1 0.43 0.61 30 9.27 85.42 12 5.39 No 74 -4.76 No 0 0 No -22 0.58 No 48 66.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 123069773 + NM_014708 KNTC1 1 0.13 0.13 8 8.18 95.65 27 6.36 Yes 18 0.54 No 0 0 No -26 0.77 Yes 44 85.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123070174 + NM_014708 KNTC1 1 0.18 0.17 10 -1.74 0 26 5.66 Yes 13 1.05 Yes 33 0.82 Yes -25 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 123072307 + NM_014708 KNTC1 1 0.61 0.53 29 7.62 82.87 25 5.78 Yes 59 0.34 No 0 0 No -25 0.39 No 36 60.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 123077406 + NM_014708 KNTC1 1 0.96 0.6 31 8.28 81.71 42 5.12 No 66 -3.25 No 0 0 No -19 0.71 Yes 51 77.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123077462 + NM_014708 KNTC1 1 0.76 0.4 24 -6.27 72.15 30 7.95 Yes 32 1.19 Yes 0 0 No -29 0.94 Yes 41 94.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123077489 + NM_014708 KNTC1 1 1.48 0.89 34 -4.07 0 17 4.1 No 59 1.16 Yes 0 0 No -56 0.68 Yes 54 60.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 123078838 + NM_014708 KNTC1 1 0.17 0.11 7 3.54 87.58 25 5 No 58 0.9 Yes 0 0 No -24 0.72 Yes 16 56.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 123081736 + NM_014708 KNTC1 1 0.94 0.75 30 7.73 86.38 32 5.86 Yes 73 1.41 Yes 0 0 No -31 0.77 Yes 39 50.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 123086397 + NM_014708 KNTC1 1 0.82 0.78 40 4.94 84.87 29 6.98 Yes 36 1.45 Yes 28 0.92 Yes -28 0.88 Yes 42 86.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 123088061 + NM_014708 KNTC1 1 0.13 0.15 9 4.63 84.41 23 5.27 No 10 1.01 Yes 0 0 No -22 0.61 No 48 65.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 123098250 + NM_014708 KNTC1 1 2.37 2.28 56 6.57 81.08 21 5.56 Yes 47 0.84 Yes 23 0.64 Yes -20 0.72 Yes 50 69.38 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 123101953 + NM_014708 KNTC1 1 0.16 0.18 12 4.46 73.66 48 5.49 No 35 1.21 Yes 37 0.71 Yes -37 0.77 Yes 33 90.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 123109149 + NM_014708 KNTC1 1 0.18 0.14 9 3.5 0 34 7.68 Yes 21 2.23 Yes 0 0 No -33 0.94 Yes 37 97.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122167943 - NR_026698 KPNA1 1 0.29 0.5 26 5.1 66.73 30 4.26 No 61 1.27 Yes 0 0 No -24 0.42 No 41 72.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 122172112 - NR_026698 KPNA1 1 0.13 0.14 9 3.91 87.74 21 4.8 No 61 1.36 Yes 0 0 No -20 0.92 Yes 50 96.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122194769 - NR_026698 KPNA1 1 0.71 1.64 49 9.56 81.74 26 6.16 Yes 27 0.73 No 0 0 No -25 0.69 Yes 45 82.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 66039269 + NM_001320611 KPNA2 1 0.03 0.33 18 -0.37 66.75 39 5.14 No 65 1.25 Yes 0 0 No -33 0.82 Yes 37 82.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 66042613 + NM_001320611 KPNA2 1 0.02 0.19 12 -3.73 0 32 7.4 Yes 19 0.28 No 37 0.82 Yes -31 0.67 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 66042623 + NM_001320611 KPNA2 1 0.03 0.26 16 -4.26 0 42 7.97 Yes 29 0.23 No 0 0 No -41 0.57 No 29 73.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 50276033 - NM_002267 KPNA3 1 0.08 0.29 15 -24.69 0 31 5.8 Yes 23 0.86 Yes 0 0 No -30 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 50306602 - NM_002267 KPNA3 1 0.1 0.17 9 -12.41 0 25 6.06 Yes 5 0.94 Yes 0 0 No -24 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 50312906 - NM_002267 KPNA3 1 0.26 0.57 27 8.49 83.03 20 5.71 Yes 7 0.82 Yes 0 0 No -19 0.71 Yes 51 68.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 50320192 - NM_002267 KPNA3 1 0.14 0.24 14 9.95 93 39 7.13 Yes 58 0.59 No 0 0 No -38 0.92 Yes 32 94.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 160219989 - NM_002268 KPNA4 1 0.08 0.24 15 -20.18 0 36 8.81 Yes 23 0.86 Yes 0 0 No -35 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 160221856 - NM_002268 KPNA4 1 0.11 0.33 20 8.19 83.92 36 5.96 Yes 62 -3.49 No 0 0 No -35 0.9 Yes 35 90.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 160229951 - NM_002268 KPNA4 1 0.05 0.13 9 7.91 87.19 37 6.23 Yes 24 0.95 Yes 0 0 No -36 0.82 Yes 34 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 160242921 - NM_002268 KPNA4 1 0.16 0.49 28 5.38 84.32 40 6.38 Yes 4 0.14 No 0 0 No -25 0.51 No 45 34.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 160243047 - NM_002268 KPNA4 1 0.05 0.17 10 7.41 85.88 26 9.99 Yes 13 0.95 Yes 0 0 No -25 0.72 Yes 45 73.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 160253352 - NM_002268 KPNA4 1 0.1 0.26 15 -24.91 0 31 4.95 No 10 0.17 No 0 0 No -30 0.69 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 160253353 - NM_002268 KPNA4 1 0.14 0.4 23 -12.04 0 30 4.9 No 9 0.17 No 0 0 No -29 0.7 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 160282429 - NM_002268 KPNA4 1 0.93 1.78 55 4.1 81.27 68 7.13 Yes 56 0.51 No 32 0.86 Yes -32 0.77 Yes 38 85.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 117002609 + NM_002269 KPNA5 1 4.72 0.42 21 5.27 80.01 19 4.86 No 6 0.51 No 22 0.58 Yes -22 0.82 Yes 48 72.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 117002655 + NM_002269 KPNA5 1 8.74 0.85 40 10.9 91.81 50 7.42 Yes 52 0.49 No 0 0 No -26 0.73 Yes 32 55.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 117024445 + NM_002269 KPNA5 1 8.73 1.67 53 3.97 84.41 22 5.69 Yes 68 0.36 No 0 0 No -29 0.35 No 41 56.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 117036374 + NM_002269 KPNA5 1 1.61 0.22 9 4.8 82.57 24 5.1 No 11 1.06 Yes 0 0 No -23 0.88 Yes 47 93.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 117036374 + NM_002269 KPNA5 1 44.73 4.33 69 4.8 82.57 24 5.1 No 11 1.06 Yes 0 0 No -23 0.88 Yes 47 93.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 117036377 + NM_002269 KPNA5 1 6.21 0.65 33 5.32 88.57 27 5.38 No 14 1.06 Yes 0 0 No -26 0.89 Yes 44 93.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 117046963 + NM_002269 KPNA5 1 0.54 0.13 8 2.15 70.62 48 5.85 Yes 49 1.74 Yes 0 0 No -30 0.71 Yes 40 72.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 117052104 + NM_002269 KPNA5 1 0.67 0.11 7 10.64 93.99 29 7.05 Yes 16 1.04 Yes 0 0 No -28 0.68 Yes 42 69.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 32591671 + NM_012316 KPNA6 1 2.13 2.86 68 7.58 87.15 56 7.14 Yes 43 0.52 No 0 0 No -29 0.69 Yes 15 56.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 32595345 + NM_012316 KPNA6 1 0.1 0.11 7 7.59 85.4 24 5.41 No 73 0.9 Yes 0 0 No -30 0.36 No 40 56.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 32595395 + NM_012316 KPNA6 1 0.12 0.15 10 7.31 86.71 18 5.48 No 23 0.36 No 0 0 No -17 0.64 No 53 69.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32604779 + NM_012316 KPNA6 1 0.09 0.11 7 4.53 75.36 27 5.81 Yes 10 0.38 No 0 0 No -22 0.87 Yes 48 93.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 32605355 + NM_012316 KPNA6 1 4.31 5.57 72 10.03 94.25 37 5.29 No 24 0.04 No 0 0 No -29 0.58 No 41 80.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 32609379 + NM_012316 KPNA6 1 0.11 0.13 7 8.53 77.6 26 5.84 Yes 13 1.82 Yes 0 0 No -25 0.59 No 45 61.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 32614190 + NM_012316 KPNA6 1 0.32 0.4 23 3.48 87.56 51 8.31 Yes 38 0.97 Yes 0 0 No -39 0.75 Yes 31 74.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32620169 + NM_012316 KPNA6 1 0.11 0.14 10 -3.58 0 16 4.36 No 3 0.16 No 21 0.41 Yes -15 0.69 Yes 55 43.53 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 32620190 + NM_012316 KPNA6 1 2.32 3 64 -1.3 82.18 16 4.61 No 24 0.2 No 0 0 No -23 0.75 Yes 47 91.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 45734276 + NM_001276453 KPNB1 1 0.01 0.13 8 4.73 84.03 16 4.69 No 11 0.56 No 18 0.93 Yes -23 0.95 Yes 47 97.25 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45739534 + NM_001276453 KPNB1 1 0.07 0.39 21 5.76 83.18 27 5.59 Yes 52 -2.81 No 26 0.95 Yes -26 0.96 Yes 44 97.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45740475 + NM_001276453 KPNB1 1 0.04 0.21 12 3.67 83.84 17 4.8 No 27 1.19 Yes 0 0 No -16 0.31 No 42 73.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 45742426 + NM_001276453 KPNB1 1 0.08 0.72 33 0.95 0 29 5.92 Yes 44 -1.78 No 0 0 No -26 0.66 Yes 44 48.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 45747181 + NM_001276453 KPNB1 1 0.03 0.29 20 5.74 80.74 27 6.8 Yes 14 1.27 Yes 0 0 No -26 0.49 No 40 60.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 45751698 + NM_001276453 KPNB1 1 0.02 0.24 13 3.84 76.82 19 3.4 No 1 0.6 No 0 0 No -29 0.49 No 52 42.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 45753759 + NM_001276453 KPNB1 1 0.02 0.18 9 3.5 70.5 28 7.37 Yes 16 -2.29 No 19 0.93 Yes -27 0.9 Yes 43 85.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45755650 + NM_001276453 KPNB1 1 0.03 0.32 16 -2.19 0 16 4.36 No 53 -5.37 No 29 0.86 Yes -15 0.82 Yes 49 45.12 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 45758160 + NM_001276453 KPNB1 1 0.01 0.13 7 10.95 89.67 48 7.35 Yes 49 -2.05 No 0 0 No -40 0.56 No 39 76.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 47978797 - NR_111923 KPTN 1 0.63 0.11 8 -0.6 0 25 6.5 Yes 27 1.31 Yes 0 0 No -39 0.64 No 31 78.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 47979489 - NR_111923 KPTN 1 1.92 0.26 16 5.99 86.2 22 5.74 Yes 9 0.98 Yes 0 0 No -21 0.8 Yes 49 88.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47979559 - NR_111923 KPTN 1 0.94 0.14 9 1.09 0 34 3.64 No 31 0.49 No 0 0 No -29 0.67 Yes 41 64.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 25368495 - NM_004985 KRAS 1 5.43 4.11 67 5.4 83.14 25 5.14 No 41 0.5 No 25 0.64 Yes -25 0.77 Yes 45 86.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 25388161 - NM_004985 KRAS 1 0.54 0.38 20 13.23 96.42 25 4.85 No 2 1.13 Yes 24 0.68 Yes -28 0.75 Yes 42 82.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 149417143 + NM_032534 KRBA1 1 26.42 3.38 63 9.96 82.8 37 6.56 Yes 24 1.39 Yes 36 0.83 Yes -36 0.57 No 34 83.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 149417958 + NM_032534 KRBA1 1 0.95 0.24 12 2.11 80.01 24 3.74 No 39 0.26 No 0 0 No -18 0.53 No 52 68.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 149419464 + NM_032534 KRBA1 1 1.66 0.24 15 6.05 82.97 22 5.17 No 74 0.62 No 0 0 No -25 0.55 No 51 51.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 149426577 + NM_032534 KRBA1 1 2.4 0.36 21 9.8 84.97 14 7.73 Yes 1 1.23 Yes 0 0 No -47 0.65 No 19 62.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 149429508 + NM_032534 KRBA1 1 1.11 0.32 18 6.66 74.64 21 5.83 Yes 8 0.71 No 0 0 No -27 0.47 No 50 69.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 8274813 - NM_001304947 KRBA2 1 8.07 0.32 19 10.28 85.21 33 7.87 Yes 55 1.71 Yes 0 0 No -32 0.92 Yes 38 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8275127 - NM_001304947 KRBA2 1 14.53 0.69 35 6.46 84.57 21 6.05 Yes 8 1.48 Yes 0 0 No -20 0.62 No 50 77.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 8275400 - NM_001304947 KRBA2 1 49.25 2.28 64 9.41 91.72 29 5.68 Yes 38 0.7 No 29 0.58 Yes -29 0.63 No 41 56.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 46309222 + NM_001129899 KRBOX4 1 0.34 0.11 7 6.77 87.08 18 5.68 Yes 53 1.25 Yes 0 0 No -30 0.5 No 30 70.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 46311000 + NM_001129899 KRBOX4 1 1.43 0.32 19 5.23 79.36 36 5.93 Yes 53 0.48 No 0 0 No -35 0.85 Yes 35 91.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 46311144 + NM_001129899 KRBOX4 1 0.74 0.17 10 9.27 91.91 24 5.7 Yes 41 0.71 No 0 0 No -23 0.35 No 47 68.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 46311405 + NM_001129899 KRBOX4 1 0.87 0.18 11 8.98 94.28 38 6.16 Yes 55 -0.87 No 0 0 No -38 0.36 No 32 45.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 46331459 + NM_001129899 KRBOX4 1 1.87 0.14 9 6.33 79.49 31 6.13 Yes 18 0.82 Yes 30 0.77 Yes -30 0.65 No 40 70.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 46332187 + NM_001129899 KRBOX4 1 8.56 0.39 21 1.45 79.66 36 4.75 No 57 0.93 Yes 23 0.88 Yes -26 0.42 No 44 52.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 46331459 + NM_001129899 KRBOX4 1 43.94 2.22 59 6.33 79.49 31 6.13 Yes 18 0.82 Yes 30 0.77 Yes -30 0.65 No 40 70.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 46332187 + NM_001129899 KRBOX4 1 7.9 0.47 25 1.45 79.66 36 4.75 No 57 0.93 Yes 23 0.88 Yes -26 0.42 No 44 52.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 88329120 - NM_016618 KRCC1 1 1.47 1.83 55 7.76 83.13 33 6.76 Yes 20 1.42 Yes 0 0 No -32 0.89 Yes 38 89.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 88333751 - NM_016618 KRCC1 1 32.3 16.11 72 6.88 74.33 30 7.02 Yes 71 0.61 No 0 0 No -29 0.79 Yes 41 82.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 88333829 - NM_016618 KRCC1 1 0.25 0.14 8 2.89 69.82 37 5.18 No 2 0.41 No 22 0.9 Yes -31 0.49 No 40 50.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 88336531 - NM_016618 KRCC1 1 0.53 0.11 7 6.33 86.7 15 4.91 No 47 1.23 Yes 0 0 No -24 0.44 No 46 58.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10671149 - NM_023008 KRI1 1 0.14 0.11 8 5.81 77.07 39 6.71 Yes 68 1.46 Yes 29 0.89 Yes -38 0.69 Yes 32 88.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10673498 - NM_023008 KRI1 1 0.25 0.15 7 -3.2 0 21 5 No 32 0.47 No 28 0.79 Yes -20 0.78 Yes 50 66.99 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 91842653 - NM_194456 KRIT1 1 0.34 0.31 17 7.7 85.17 24 4.87 No 72 0.46 No 0 0 No -23 0.78 Yes 53 59.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 91843317 - NM_194456 KRIT1 1 0.19 0.24 13 2.87 82.88 19 4.9 No 6 0.25 No 27 0.81 Yes -18 0.44 No 52 42.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 91843396 - NM_194456 KRIT1 1 0.41 0.53 28 5.34 80.07 20 4.89 No 14 1.24 Yes 0 0 No -19 0.79 Yes 51 67.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 91844032 - NM_194456 KRIT1 1 0.1 0.13 8 1.47 76.01 24 5 No 73 0.99 Yes 0 0 No -22 0.37 No 59 43.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 91851384 - NM_194456 KRIT1 1 0.06 0.1 7 3.22 72.83 27 5.6 Yes 14 1 Yes 23 0.85 Yes -30 0.36 No 40 66.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 91856018 - NM_194456 KRIT1 1 0.1 0.13 8 1.85 0 25 5.56 Yes 12 0.62 No 30 0.02 Yes -24 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 91864920 - NM_194456 KRIT1 1 0.41 0.49 28 6.61 86.51 31 4.4 No 0 1.15 Yes 0 0 No -24 0.86 Yes 46 78.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 91870173 - NM_194456 KRIT1 1 0.43 0.38 17 -4.45 48.44 56 9.45 Yes 43 0.99 Yes 0 0 No -55 0.65 No 15 83.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 91870451 - NM_194456 KRIT1 1 0.21 0.17 9 0.36 75.13 24 3.9 No 22 0.98 Yes 23 0.82 Yes -23 0.75 Yes 47 78.85 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 91871476 - NM_194456 KRIT1 1 0.49 0.22 14 7.55 82.03 47 5.34 No 34 0.45 No 28 0.45 Yes -25 0.43 No 42 57.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 91873416 - NM_194456 KRIT1 1 0.91 0.21 12 2.93 80.09 27 6.11 Yes 7 0.88 Yes 0 0 No -29 0.9 Yes 41 94.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 75900141 - NM_007043 KRR1 1 0.72 1.33 51 5.91 79.06 21 5.96 Yes 46 0.91 Yes 0 0 No -20 0.48 No 50 80.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 75900386 - NM_007043 KRR1 1 0.06 0.14 8 -3.11 0 37 6.88 Yes 24 1.38 Yes 0 0 No -39 0.65 No 31 64.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 75903313 - NM_007043 KRR1 1 0.11 0.24 14 5.25 83.96 32 6.14 Yes 19 0.65 No 0 0 No -31 0.68 Yes 42 69.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 155142096 - NM_173852 KRTCAP2 1 0.03 0.15 11 6.08 0 20 4.58 No 7 0.86 Yes 19 0.78 Yes -19 0.79 Yes 51 84.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155144966 - NM_173852 KRTCAP2 1 0.31 1.79 66 6.52 83.55 47 6.65 Yes 34 0.51 No 0 0 No -30 0.7 Yes 40 66.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 155145068 - NM_173852 KRTCAP2 1 0.04 0.14 7 1.93 77.16 28 5.29 No 39 1.35 Yes 0 0 No -27 0.82 Yes 43 65.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 155145149 - NM_173852 KRTCAP2 1 0.1 0.36 19 10.48 81.27 35 6.08 Yes 56 1.66 Yes 0 0 No -26 0.69 Yes 44 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 25878286 + NM_014238 KSR1 1 0.21 0.17 11 10.11 85.82 54 8.6 Yes 41 1.62 Yes 0 0 No -45 0.71 Yes 25 63.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 25885071 + NM_014238 KSR1 1 2.64 2 63 8.63 85.87 21 6.78 Yes 8 1.32 Yes 20 0.74 Yes -20 0.81 Yes 50 94.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 25909635 + NM_014238 KSR1 1 0.48 0.32 18 7.64 83.96 13 5.91 Yes 32 0.71 No 31 0.84 Yes -24 0.5 No 43 75.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 25909951 + NM_014238 KSR1 1 0.23 0.15 9 8.04 75.88 21 6.24 Yes 8 2.18 Yes 0 0 No -20 0.81 Yes 50 72.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 25928255 + NM_014238 KSR1 1 0.64 0.43 22 8.72 89.33 45 7.14 Yes 68 -1.44 No 0 0 No -23 0.8 Yes 47 86.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 25932087 + NM_014238 KSR1 1 0.24 0.19 11 5.48 88.89 17 4.31 No 4 1.14 Yes 0 0 No -24 0.9 Yes 46 94.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 25936149 + NM_014238 KSR1 1 0.21 0.19 12 3.04 64.15 23 5.1 No 63 1.44 Yes 0 0 No -22 0.42 No 48 54.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 25937875 + NM_014238 KSR1 1 1.35 1.39 54 7.95 83.34 33 5.9 Yes 48 0.32 No 0 0 No -32 0.55 No 38 72.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 25937877 + NM_014238 KSR1 1 0.5 0.36 16 -4.05 79.82 35 6.05 Yes 53 0.32 No 0 0 No -34 0.5 No 36 76.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 25938234 + NM_014238 KSR1 1 0.15 0.17 11 6.24 76.9 26 5.29 No 18 0.2 No 0 0 No -25 0.43 No 49 50.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 25942004 + NM_014238 KSR1 1 0.27 0.18 11 10.11 87.31 23 5.62 Yes 10 1.42 Yes 0 0 No -26 0.87 Yes 44 74.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 25950015 + NM_014238 KSR1 1 0.88 0.24 14 10.27 86.03 21 5.57 Yes 76 0.78 Yes 0 0 No -20 0.81 Yes 50 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 25950339 + NM_014238 KSR1 1 240.05 58.69 72 10.91 88.33 27 6.94 Yes 69 1.41 Yes 27 0.78 Yes -27 0.85 Yes 43 83.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 56055625 + NR_073129 KTN1 1 3.15 1.01 43 8.12 82.21 33 7.97 Yes 20 1.08 Yes 0 0 No -30 0.39 No 38 57.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 56068478 + NR_073129 KTN1 1 0.9 0.32 18 4.67 0 34 5.54 No 42 0.58 No 37 0.26 Yes -24 0.61 No 46 63.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 56078745 + NR_073129 KTN1 1 0.86 0.44 26 2.73 0 12 3.76 No 42 2.16 Yes 0 0 No -54 0.88 Yes 16 96.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 56078857 + NR_073129 KTN1 1 0.22 0.13 7 2.1 74.97 32 6.39 Yes 19 1.14 Yes 0 0 No -35 0.68 Yes 35 78.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 56078745 + NR_073129 KTN1 1 0.44 0.29 18 2.73 0 12 3.76 No 42 2.16 Yes 0 0 No -54 0.88 Yes 16 96.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 56085900 + NR_073129 KTN1 1 0.03 0.1 7 -12.9 0 63 5.84 Yes 50 1.13 Yes 0 0 No -33 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 56085983 + NR_073129 KTN1 1 0.14 0.39 21 7.79 85.14 25 4.81 No 22 0.77 Yes 0 0 No -24 0.72 Yes 46 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 56090118 + NR_073129 KTN1 1 0.03 0.13 7 2.6 83 33 7.06 Yes 20 0.69 No 0 0 No -32 0.83 Yes 38 80.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 56099953 + NR_073129 KTN1 1 0.04 0.14 9 -13.24 0 29 5.84 Yes 33 0.92 Yes 0 0 No -28 0.62 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 56099958 + NR_073129 KTN1 1 0.05 0.18 12 -0.24 0 14 3.87 No 38 0.91 Yes 0 0 No -27 0.57 No 37 54.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 56101230 + NR_073129 KTN1 1 0.22 0.99 42 -1.13 74.51 21 4.69 No 49 1.02 Yes 19 0.94 Yes -61 0.62 No 50 58.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 56101247 + NR_073129 KTN1 1 0.37 1.68 58 -0.15 0 24 5.1 No 11 1.18 Yes 19 0.94 Yes -23 0.85 Yes 47 93.22 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 56103573 + NR_073129 KTN1 1 0.03 0.13 7 7.32 83.21 23 7.41 Yes 10 1.05 Yes 0 0 No -22 0.9 Yes 48 89.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 56104511 + NR_073129 KTN1 1 0.16 0.57 26 -1.56 76.45 23 3.65 No 75 0.37 No 0 0 No -56 0.73 Yes 14 73.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 56107100 + NR_073129 KTN1 1 0.13 0.39 22 -2.93 0 12 4.24 No 20 0.31 No 0 0 No -41 0.76 Yes 29 55.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 56118004 + NR_073129 KTN1 1 1.08 3.83 71 7.35 83.36 26 4.69 No 60 -3.6 No 25 0.68 Yes -28 0.51 No 42 56.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 56119544 + NR_073129 KTN1 1 0.03 0.11 7 6.24 77.69 15 5.81 Yes 2 1.05 Yes 25 0.84 Yes -40 0.47 No 30 40.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 56128240 + NR_073129 KTN1 1 0.05 0.17 10 -10.64 0 36 5.92 Yes 44 0.36 No 0 0 No -23 0.83 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 56129622 + NR_073129 KTN1 1 0.47 1.11 45 -4.96 0 41 8.3 Yes 28 1.35 Yes 32 0.84 Yes -40 0.5 No 30 87.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 56132373 + NR_073129 KTN1 1 0.34 0.47 28 8.93 94.36 20 5.43 No 54 -4.28 No 0 0 No -28 0.6 No 41 54.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 56133967 + NR_073129 KTN1 1 0.14 0.21 10 -11.39 0 12 4.24 No 11 1.03 Yes 0 0 No -32 0.67 Yes 38 61.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 56135364 + NR_073129 KTN1 1 0.05 0.21 13 4.97 70.74 42 7.54 Yes 29 1.39 Yes 0 0 No -41 0.73 Yes 29 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 56135477 + NR_073129 KTN1 1 0.08 0.31 18 4.59 63.37 34 7.06 Yes 66 0.83 Yes 0 0 No -29 0.92 Yes 41 88.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 56138498 + NR_073129 KTN1 1 0.02 0.13 7 -10.05 0 30 6.24 Yes 66 0.74 No 25 0.68 Yes -21 0.67 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 56139353 + NR_073129 KTN1 1 0.08 0.38 21 -1.12 0 16 3.87 No 11 0.73 No 0 0 No -23 0.56 No 47 53.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 56139916 + NR_073129 KTN1 1 0.19 0.25 14 5.25 74.97 25 5.37 No 0 0.44 No 0 0 No -24 0.66 No 46 66.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18675943 + NM_001171949 KXD1 1 1.72 4.74 70 6.26 82.05 28 5.39 No 69 2.16 Yes 27 0.75 Yes -27 0.49 No 44 58.67 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 18677857 + NM_001171949 KXD1 1 0.04 0.1 7 9.41 80.02 25 6.71 Yes 12 1.77 Yes 0 0 No -24 0.97 Yes 46 93.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18678275 + NM_001171949 KXD1 1 0.08 0.25 14 -2.72 0 15 3.99 No 26 0.52 No 0 0 No -36 0.44 No 32 62.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 131595944 - NM_001287390 KYAT1 1 2.18 0.14 8 -12.06 0 17 4 No 66 -4.93 No 23 0.49 Yes -43 0.38 No 63 37.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 131598349 - NM_001287390 KYAT1 1 1.35 0.11 8 -4.18 0 33 6 Yes 31 1.87 Yes 0 0 No -32 0.94 Yes 38 80.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131598385 - NM_001287390 KYAT1 1 16.87 1.81 56 8 76.59 30 6 Yes 75 -3.5 No 29 0.66 Yes -26 0.42 No 44 62.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 131602837 - NM_001287390 KYAT1 1 1.33 0.18 11 8.27 82.84 60 9.95 Yes 67 -0.23 No 0 0 No -47 0.72 Yes 23 72.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131605419 - NM_001287390 KYAT1 1 2.97 0.26 17 6.58 93.6 16 4.24 No 3 1.38 Yes 0 0 No -27 0.53 No 43 62.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 89404382 - NM_001008661 KYAT3 1 0.16 0.19 11 8.53 93.54 19 4.81 No 1 0.24 No 0 0 No -22 0.35 No 48 30.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 89415543 - NM_001008661 KYAT3 1 0.24 0.32 17 4.86 83.91 28 6.95 Yes 15 0.27 No 0 0 No -28 0.77 Yes 42 84.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 89418638 - NM_001008661 KYAT3 1 1.4 1.89 62 10.81 94.2 32 8.1 Yes 19 1.37 Yes 0 0 No -31 0.64 No 39 59.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 89427259 - NM_001008661 KYAT3 1 0.44 0.33 14 10.04 89.66 30 6.64 Yes 17 1.17 Yes 0 0 No -29 0.63 No 41 47.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 89430396 - NM_001008661 KYAT3 1 0.61 0.81 36 4.34 70.73 44 10.9 Yes 43 1.06 Yes 43 0.7 Yes -43 0.8 Yes 27 93.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 89434516 - NM_001008661 KYAT3 1 0.22 0.33 17 -1.88 70.6 24 5 No 74 0.95 Yes 25 0.9 Yes -23 0.59 No 47 79.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 143637031 + NM_001032998 KYNU 1 0.42 0.6 24 7.33 82.9 26 5.1 No 70 0.95 Yes 25 0.86 Yes -25 0.95 Yes 45 93.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 143638913 + NM_001032998 KYNU 1 4.13 5.42 72 8.56 83.3 22 6.99 Yes 9 0.5 No 28 0.56 Yes -21 0.49 No 49 43.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 143639508 + NM_001032998 KYNU 1 0.32 0.43 21 10.07 88.27 53 6.93 Yes NA NA NA 0 0 No -49 0.49 No 21 62.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 143640454 + NM_001032998 KYNU 1 0.67 0.83 36 8.04 84.55 22 4.89 No 25 0 No 0 0 No -21 0.48 No 46 62.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 143704677 + NM_001032998 KYNU 1 0.63 1.58 50 8.8 89.39 37 7.61 Yes 57 1.78 Yes 31 0.43 Yes -36 0.54 No 41 40.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 143711590 + NM_001032998 KYNU 1 0.15 0.32 18 6.72 92.61 32 5.4 No 3 0.64 No 25 0.68 Yes -26 0.64 No 44 69.97 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 143722221 + NM_001032998 KYNU 1 0.59 1.08 42 8.87 81.27 28 5.83 Yes 44 0.26 No 0 0 No -27 0.55 No 43 74.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 143728739 + NM_001032998 KYNU 1 0.07 0.14 10 8.33 86.12 27 6.24 Yes 14 0.09 No 0 0 No -26 0.71 Yes 44 64.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 143743529 + NM_001032998 KYNU 1 0.24 0.51 27 2.48 82.92 21 4.55 No 67 0.42 No 0 0 No -35 0.43 No 35 43.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50712839 - NM_024884 L2HGDH 1 2.49 0.64 26 10.11 95.2 25 7.34 Yes 12 2.27 Yes 24 0.92 Yes -24 0.93 Yes 46 94.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 50734601 - NM_024884 L2HGDH 1 0.22 0.11 8 7.27 86.5 24 5.1 No 38 -2.49 No 0 0 No -23 0.39 No 51 69.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 50745947 - NM_024884 L2HGDH 1 3.1 1.01 42 12.69 94.37 22 5.67 Yes 58 0.67 No 0 0 No -27 0.76 Yes 43 83.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50749199 - NM_024884 L2HGDH 1 0.38 0.13 8 -5.77 0 18 4.12 No 54 -2.49 No 0 0 No -17 0.58 No 53 30.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50753966 - NM_024884 L2HGDH 1 0.48 0.13 9 3.29 71.75 44 7.01 Yes 31 0.42 No 0 0 No -20 0.41 No 50 47.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50754044 - NM_024884 L2HGDH 1 1.94 0.51 26 6.52 77.98 30 7.21 Yes 17 1.3 Yes 0 0 No -29 0.88 Yes 41 78.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50760002 - NM_024884 L2HGDH 1 4.47 1.29 44 9.53 87.39 25 5.47 No 41 0.35 No 24 0.89 Yes -24 0.71 Yes 46 65.6 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 50778152 - NM_024884 L2HGDH 1 1.84 0.49 25 10.31 81.87 37 7.41 Yes 69 -2.85 No 24 0.69 Yes -36 0.43 No 34 55.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 59941245 - NM_144581 L3HYPDH 1 5.02 0.65 33 4.52 84.33 17 4.27 No 48 -4.51 No 20 0.82 Yes -20 0.78 Yes 50 74.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 59942318 - NM_144581 L3HYPDH 1 3.74 0.32 19 5.71 77.98 34 6.61 Yes 21 1.28 Yes 0 0 No -33 0.56 No 37 68.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 42144558 + NM_032107 L3MBTL1 1 7.89 0.22 14 -1.14 0 20 4.56 No 7 0.94 Yes 19 0.94 Yes -19 0.92 Yes 51 82.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 41602010 + NM_031488 L3MBTL2 1 1.26 1.15 45 11.61 95.65 24 9.84 Yes 11 1.67 Yes 23 0.93 Yes -23 0.92 Yes 47 92.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 41609854 + NM_031488 L3MBTL2 1 0.17 0.13 9 3.44 86.85 29 4.26 No 5 0.45 No 28 0.65 Yes -28 0.83 Yes 42 65.39 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 41613519 + NM_031488 L3MBTL2 1 1.88 1.54 54 10.46 82.3 33 6.71 Yes 20 1.43 Yes 0 0 No -32 0.7 Yes 38 64.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 41620052 + NM_031488 L3MBTL2 1 0.27 0.31 17 -1.38 0 15 4.47 No 52 0.68 No 0 0 No -17 0.36 No 53 41.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 41620980 + NM_031488 L3MBTL2 1 0.17 0.15 8 -5.11 0 13 4.12 No 50 2.05 Yes 0 0 No -30 0.65 No 40 33.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41623522 + NM_031488 L3MBTL2 1 0.24 0.19 10 9.03 84.81 34 7.35 Yes 21 2.1 Yes 0 0 No -33 0.69 Yes 37 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41623578 + NM_031488 L3MBTL2 1 0.58 0.44 22 8.15 85.63 44 7.66 Yes 31 0.64 No 26 0.76 Yes -26 0.69 Yes 44 65.03 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 130346132 + NM_001007102 L3MBTL3 1 3.72 0.46 26 8.24 80.12 18 8 Yes 5 0.74 No 0 0 No -23 0.38 No 45 34.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 130370795 + NM_001007102 L3MBTL3 1 9.7 0.6 25 2.34 68.3 15 4.34 No 64 0.52 No 24 0.7 Yes -18 0.7 Yes 52 67.99 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 130370900 + NM_001007102 L3MBTL3 1 166.61 8.56 72 5.47 81.12 90 7.2 Yes 3 1.11 Yes 25 0.93 Yes -25 0.61 No 45 80.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 44457087 + NM_153218 LACC1 1 1.68 0.61 24 5.3 90.88 23 5.2 No 37 -2.11 No 0 0 No -22 0.62 No 48 74.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 44464139 + NM_153218 LACC1 1 0.53 0.15 8 7.47 76.14 20 5.74 Yes 33 1.51 Yes 0 0 No -19 0.41 No 51 57.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 63417901 + NM_171846 LACTB 1 0.17 0.15 10 6.4 92.34 26 4.95 No 36 0.35 No 0 0 No -25 0.88 Yes 45 82.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 63421687 + NM_171846 LACTB 1 3.67 4.28 71 -2.07 0 51 5.04 No 35 0.68 No 0 0 No -47 0.61 No 23 80.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 182994873 + NM_002293 LAMC1 1 0.52 0.32 21 11.93 95.1 25 5.35 No 58 0.95 Yes 0 0 No -28 0.4 No 46 56.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 183075615 + NM_002293 LAMC1 1 0.15 0.13 8 7.73 84.17 31 4.24 No 49 -1.58 No 0 0 No -30 0.64 No 43 60.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 183083625 + NM_002293 LAMC1 1 0.24 0.26 16 7.44 84.3 18 5 No 74 1.26 Yes 23 0.84 Yes -24 0.76 Yes 46 73.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 183099963 + NM_002293 LAMC1 1 0.2 0.21 11 2.84 67.18 29 6.34 Yes 16 0.84 Yes 0 0 No -28 0.67 Yes 42 80.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183102090 + NM_002293 LAMC1 1 0.2 0.14 8 9.63 91.39 16 4.34 No 3 1.59 Yes 0 0 No -15 0.42 No 55 31.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 183107089 + NM_002293 LAMC1 1 0.11 0.1 7 1.72 74.81 33 7.4 Yes 20 1.35 Yes 0 0 No -32 0.77 Yes 38 72.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183107323 + NM_002293 LAMC1 1 0.13 0.13 8 7.81 88.81 28 5.31 No 21 0.76 No 0 0 No -27 0.85 Yes 43 86.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 183111673 + NM_002293 LAMC1 1 0.27 0.31 18 3.43 0 46 7.8 Yes 2 1.04 Yes 0 0 No -49 0.78 Yes 21 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 113959943 + NM_005561 LAMP1 1 0.12 0.14 10 10.23 91.83 32 5.68 Yes 43 1.49 Yes 0 0 No -27 0.41 No 39 56.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 113973785 + NM_005561 LAMP1 1 0.09 0.26 15 -6.8 65.18 27 6.32 Yes 14 0.87 Yes 0 0 No -26 0.69 Yes 44 45.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 113975700 + NM_005561 LAMP1 1 0.12 0.33 16 2.05 70.5 38 6.42 Yes 68 1.48 Yes 25 0.83 Yes -37 0.62 No 33 44.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 113976601 + NM_005561 LAMP1 1 0.03 0.1 7 -4.98 0 29 6.48 Yes 16 1.98 Yes 0 0 No -28 0.93 Yes 42 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 119576517 - NM_013995 LAMP2 1 0.08 0.18 11 -17.68 0 25 5 No 53 1.5 Yes 0 0 No -24 0.89 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 119590586 - NM_013995 LAMP2 1 0.43 0.64 32 3.92 79.45 25 6.71 Yes 74 0.03 No 0 0 No -24 0.88 Yes 46 92.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 182842593 - NM_014398 LAMP3 1 0.08 0.18 12 5.5 90.92 28 5.29 No 53 0.84 Yes 0 0 No -27 0.71 Yes 43 42.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 182842618 - NM_014398 LAMP3 1 0.73 1.85 48 3.17 83.14 41 7.11 Yes 28 0.84 Yes 0 0 No -40 0.63 No 30 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 182849313 - NM_014398 LAMP3 1 0.2 0.46 24 8.98 78.35 30 6 Yes 56 -2.95 No 0 0 No -29 0.71 Yes 41 87.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 182849828 - NM_014398 LAMP3 1 0.18 0.39 22 6.37 83.43 45 9.14 Yes 32 0.88 Yes 0 0 No -34 0.37 No 31 49.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182850745 - NM_014398 LAMP3 1 15.76 37.14 72 6.92 77.76 29 6.45 Yes 16 1.56 Yes 0 0 No -28 0.79 Yes 42 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 182853427 - NM_014398 LAMP3 1 0.11 0.25 16 8.75 91.84 20 4.9 No 59 -4.24 No 0 0 No -24 0.69 Yes 46 92.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 182857592 - NM_014398 LAMP3 1 0.3 1 36 0.55 71.99 22 5.1 No 9 1.01 Yes 0 0 No -21 0.8 Yes 49 85.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 182869984 - NM_014398 LAMP3 1 0.12 0.33 14 9.75 87.2 25 6.35 Yes 12 0.71 No 0 0 No -24 0.72 Yes 46 75.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 182875921 - NM_014398 LAMP3 1 0.19 0.38 21 6.18 83.12 29 5.74 Yes 68 1.09 Yes 28 0.79 Yes -28 0.74 Yes 42 86.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 182878746 - NM_014398 LAMP3 1 0.08 0.22 12 3.12 0 30 5.47 No 71 2.06 Yes 24 0.95 Yes -29 0.79 Yes 41 79.84 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 182878751 - NM_014398 LAMP3 1 0.25 0.58 30 5.12 83.84 25 5 No 66 2.07 Yes 24 0.95 Yes -24 0.84 Yes 46 89.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71808953 - NM_017907 LAMTOR1 1 0.18 0.75 36 3.4 0 11 4.12 No 74 2.43 Yes 0 0 No -51 0.96 Yes 19 97.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71809879 - NM_017907 LAMTOR1 1 0.03 0.1 7 8.26 85.53 16 5.58 Yes 74 1.4 Yes 0 0 No -25 0.57 No 45 68.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 156025361 + NM_014017 LAMTOR2 1 0.46 1 42 -0.62 0 19 4.58 No 22 -2.59 No 0 0 No -17 0.85 Yes 53 73.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 100806764 - NR_024170 LAMTOR3 1 0.24 0.43 20 6.43 78.64 24 6.97 Yes 11 0.5 No 0 0 No -23 0.85 Yes 47 93.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 100815158 - NR_024170 LAMTOR3 1 912.43 97.67 72 7.09 0 21 4.58 No 8 0.61 No 20 0.97 Yes -20 0.94 Yes 50 94.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 99747056 + NR_134530 LAMTOR4 1 1.77 0.22 13 3.27 85.96 24 3.78 No 32 -3.13 No 0 0 No -23 0.82 Yes 48 66.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 99750275 + NR_134530 LAMTOR4 1 0.51 0.96 37 7.34 78.88 27 3.5 No 65 -3.98 No 22 0.82 Yes -22 0.59 No 48 51.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 99750325 + NR_134530 LAMTOR4 1 0.06 0.13 8 -1.63 78.38 22 4.96 No 49 -2.62 No 22 0.55 Yes -24 0.43 No 46 49.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 99750338 + NR_134530 LAMTOR4 1 1.18 2.38 61 3.92 79.17 23 4.11 No 62 -2.62 No 22 0.55 Yes -22 0.87 Yes 48 78.09 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 110949017 - NM_006402 LAMTOR5 1 0.07 0.39 23 -3.73 0 43 7.58 Yes 25 0.33 No 25 0.83 Yes -42 0.88 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 110949751 - NM_006402 LAMTOR5 1 0.71 4.22 69 0.07 70.28 33 5.68 Yes 6 0.08 No 26 0.47 Yes -26 0.58 No 44 70.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 211299567 - NM_001136574 LANCL1 1 0.35 0.42 25 9.34 91.07 18 5.29 No 66 0.93 Yes 0 0 No -29 0.45 No 41 39.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 211306922 - NM_001136574 LANCL1 1 0.72 0.72 37 2.59 71.06 40 6.71 Yes 27 1.88 Yes 0 0 No -25 0.61 No 31 77.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 211319320 - NM_001136574 LANCL1 1 0.24 0.22 15 6.12 84.91 27 5.56 Yes 14 0.67 No 0 0 No -26 0.88 Yes 44 94.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 55434969 + NM_018697 LANCL2 1 0.27 0.11 7 -5.78 83.22 25 5.29 No 25 0.53 No 0 0 No -24 0.89 Yes 46 94.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 55440627 + NM_018697 LANCL2 1 0.32 0.14 8 3.96 75.14 43 7.62 Yes 30 0.28 No 0 0 No -30 0.43 No 40 51.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 55477217 + NM_018697 LANCL2 1 0.36 0.25 15 7.84 86.31 46 7.25 Yes 10 0.31 No 0 0 No -22 0.61 No 48 48.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 17580690 + NM_015907 LAP3 1 0.03 0.13 8 7.18 81.52 22 5.65 Yes 61 -2.08 No 0 0 No -21 0.57 No 49 61.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 17584100 + NM_015907 LAP3 1 0.02 0.1 7 8.93 85.16 33 7.21 Yes 20 1.88 Yes 0 0 No -35 0.7 Yes 35 61.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 17587573 + NM_015907 LAP3 1 0.19 1.07 40 1.69 84.35 29 4.61 No -2 0.86 Yes 28 0.41 Yes -26 0.37 No 44 44.27 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 17587719 + NM_015907 LAP3 1 0.02 0.14 10 4.96 84.09 25 4.4 No 29 0.66 No 0 0 No -24 0.3 No 53 53.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 17591832 + NM_015907 LAP3 1 0.13 0.74 33 9.09 85.94 19 5.74 Yes 63 0.14 No 0 0 No -23 0.8 Yes 47 80.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 17595954 + NM_015907 LAP3 1 0.4 2.33 64 0.22 81.66 26 7.57 Yes 13 0.21 No 0 0 No -25 0.86 Yes 45 93.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 17595958 + NM_015907 LAP3 1 0.18 1.06 42 2.52 0 30 7.83 Yes 17 0.18 No 0 0 No -29 0.84 Yes 41 92.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 17599411 + NM_015907 LAP3 1 0.11 0.54 25 11.34 90.93 18 5.28 No 5 1.25 Yes 0 0 No -24 0.79 Yes 46 85.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 17603689 + NM_015907 LAP3 1 0.03 0.14 10 5.3 90.48 32 4.6 No 53 -3.98 No 0 0 No -25 0.64 No 45 49.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20240769 - NM_014713 LAPTM4A 1 1.46 2.18 60 0.73 0 26 5.19 No 13 0.69 No 0 0 No -25 0.54 No 45 85.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 98827531 + NM_018407 LAPTM4B 1 0.97 0.26 13 5.27 82.93 17 6.24 Yes 4 1.37 Yes 32 0.62 Yes -32 0.48 No 38 62.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 31206789 - NM_006762 LAPTM5 1 0.01 0.42 21 2.3 73.39 19 5.47 No -1 0.34 No 26 0.94 Yes -23 0.68 Yes 52 51.65 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 31208135 - NM_006762 LAPTM5 1 0.01 0.29 17 -11.68 0 13 4.36 No 0 0.19 No 18 0.84 Yes -12 0.71 Yes 63 22.41 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 31211700 - NM_006762 LAPTM5 1 0.01 0.42 19 9.35 77.64 26 4.73 No 13 0.64 No 0 0 No -25 0.9 Yes 45 96.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 31212818 - NM_006762 LAPTM5 1 0.04 1.81 57 2.26 83.94 19 4.58 No 73 -5.37 No 23 0.91 Yes -18 0.53 No 52 42.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 31214515 - NM_006762 LAPTM5 1 0.01 0.25 15 5.2 84.02 42 5.18 No 34 2.15 Yes 0 0 No -23 0.96 Yes 47 95.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 31215101 - NM_006762 LAPTM5 1 0.03 1.51 41 7.16 81.2 20 7.66 Yes 7 1.88 Yes 0 0 No -19 0.55 No 51 56.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 31222780 - NM_006762 LAPTM5 1 0.09 2.33 62 9.32 84.06 42 7.38 Yes 29 0.6 No 0 0 No -30 0.78 Yes 29 70.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 31223307 - NM_006762 LAPTM5 1 0.05 1.51 52 10.71 87.01 23 5.39 No 67 0.74 No 0 0 No -22 0.87 Yes 48 83.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 31225192 - NM_006762 LAPTM5 1 0.01 0.15 8 1.63 77.97 20 5.1 No 74 -5.29 No 0 0 No -23 0.57 No 46 38.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 31226195 - NM_006762 LAPTM5 1 0.01 0.24 15 7.94 73.63 37 5.71 Yes 29 0.72 No 0 0 No -42 0.49 No 29 65.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 33679331 - NM_004737 LARGE1 1 0.58 0.13 8 -0.82 0 43 6.86 Yes 71 1.53 Yes 0 0 No -42 0.78 Yes 28 92.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 33700645 - NM_004737 LARGE1 1 1.34 0.22 13 8.38 84.73 16 5 No 3 0.98 Yes 0 0 No -24 0.85 Yes 46 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 33701612 - NM_004737 LARGE1 1 0.37 0.1 7 5.76 83.27 17 5.13 No 23 0.11 No 0 0 No -19 0.6 No 39 64.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 33994993 - NM_004737 LARGE1 1 0.85 0.28 13 7.99 87.59 41 6.5 Yes 59 0.84 Yes 0 0 No -35 0.85 Yes 35 92.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 154171505 + NM_015315 LARP1 1 0.03 0.13 8 8.25 85.59 33 4.65 No 63 0.9 Yes 32 0.8 Yes -32 0.77 Yes 38 59.04 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 154173124 + NM_015315 LARP1 1 0.03 0.17 10 1.94 73.58 22 5 No 59 -3.12 No 22 0.91 Yes -18 0.71 Yes 52 47.38 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 154173187 + NM_015315 LARP1 1 0.15 0.69 32 2.5 68.21 28 5.15 No 54 0.85 Yes 0 0 No -21 0.25 No 44 34.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 154177828 + NM_015315 LARP1 1 0.05 0.19 11 12.84 97.46 22 6.71 Yes 27 1.69 Yes 0 0 No -21 0.93 Yes 49 95.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 154179459 + NM_015315 LARP1 1 0.38 2.57 65 7.98 83.93 30 5.83 Yes 61 -2.09 No 29 0.71 Yes -29 0.58 No 43 58.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 154181614 + NM_015315 LARP1 1 0.07 0.26 17 6.48 82.05 19 6.32 Yes 6 1.93 Yes 0 0 No -25 0.55 No 47 74.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 154184333 + NM_015315 LARP1 1 0.12 0.56 28 8.27 91.75 24 6.08 Yes 35 2.38 Yes 23 0.77 Yes -23 0.72 Yes 47 85.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 154184420 + NM_015315 LARP1 1 0.14 0.71 31 8.81 88.06 25 6.77 Yes 12 1 Yes 24 0.8 Yes -27 0.6 No 43 72.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 154190729 + NM_015315 LARP1 1 0.05 0.21 12 2.86 66.73 26 5.09 No 1 0.37 No 0 0 No -25 0.67 Yes 45 66.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 154190745 + NM_015315 LARP1 1 0.09 0.33 19 5.1 90.52 21 5 No 17 0.36 No 0 0 No -20 0.83 Yes 50 61.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 154190765 + NM_015315 LARP1 1 0.05 0.21 13 8.5 88.1 27 5.39 No 37 0.36 No 24 0.78 Yes -26 0.67 Yes 44 72.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 154190808 + NM_015315 LARP1 1 0.08 0.31 19 -14.01 0 18 5.89 Yes 5 1.87 Yes 0 0 No -26 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 154193447 + NM_015315 LARP1 1 0.04 0.18 13 -11.76 0 31 5.8 Yes 8 1.62 Yes 0 0 No -30 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 154196831 + NM_015315 LARP1 1 0.23 1.17 41 9.64 84.6 24 7.14 Yes 11 2.31 Yes 0 0 No -23 0.94 Yes 47 94.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128996441 + NM_018078 LARP1B 1 0.49 0.51 23 6.15 83.48 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.77 Yes 51 77.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128996602 + NM_018078 LARP1B 1 0.98 0.96 45 7.97 84.58 37 4.2 No 66 0.17 No 0 0 No -22 0.82 Yes 48 86.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 128996727 + NM_018078 LARP1B 1 0.36 0.33 19 4.61 0 51 8.09 Yes 38 2.74 Yes 0 0 No -50 0.66 Yes 20 92.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128998067 + NM_018078 LARP1B 1 0.15 0.14 9 8.31 86.16 22 7.28 Yes 71 1.49 Yes 0 0 No -21 0.88 Yes 49 92.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129000904 + NM_018078 LARP1B 1 0.55 0.43 24 8.51 86.62 21 7.21 Yes 8 1.25 Yes 0 0 No -20 0.89 Yes 50 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129013931 + NM_018078 LARP1B 1 8.25 3.85 69 9.56 92.03 28 6.38 Yes 36 0.05 No 0 0 No -27 0.9 Yes 43 93.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 129029037 + NM_018078 LARP1B 1 73.11 30.74 72 6.65 82.32 13 6.2 Yes 55 0.58 No 28 0.32 Yes -24 0.31 No 42 40.34 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 129029041 + NM_018078 LARP1B 1 1.34 0.54 32 0.98 0 17 6.44 Yes 59 0.58 No 0 0 No -17 0.32 No 53 50.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 129030598 + NM_018078 LARP1B 1 0.24 0.11 7 1.32 83.73 29 6.36 Yes 47 1.43 Yes 0 0 No -28 0.7 Yes 42 67.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 129043178 + NM_018078 LARP1B 1 0.44 0.15 8 1.29 75.29 25 4.35 No 63 -4.66 No 0 0 No -25 0.79 Yes 45 80.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 129043636 + NM_018078 LARP1B 1 25.83 5.07 69 13.19 91.91 57 8.45 Yes 44 2.89 Yes 29 0.05 Yes -52 0.77 Yes 18 93.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 129045781 + NM_018078 LARP1B 1 1.32 0.18 9 7.11 85.51 18 5.14 No 12 1.22 Yes 0 0 No -22 0.61 No 46 71.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 129058993 + NM_018078 LARP1B 1 0.67 0.13 8 8.21 92.95 25 5.2 No 12 1.14 Yes 0 0 No -24 0.87 Yes 46 95.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129061995 + NM_018078 LARP1B 1 2.16 0.24 7 8.57 94.37 27 6.24 Yes 75 1.02 Yes 0 0 No -26 0.89 Yes 44 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129119061 + NM_018078 LARP1B 1 0.62 0.13 8 4.74 84.41 35 6 Yes 49 0.2 No 0 0 No -29 0.9 Yes 41 93.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 50796457 + NR_033200 LARP4 1 9.31 3 65 7.14 82.51 26 5.04 No 56 1 Yes 25 0.86 Yes -25 0.8 Yes 45 64.97 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 50797335 + NR_033200 LARP4 1 0.77 0.19 11 8.29 76.3 49 8.03 Yes 4 0.36 No 0 0 No -24 0.4 No 46 62.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 50809494 + NR_033200 LARP4 1 0.57 0.21 11 3.42 84.41 38 5.04 No 26 0.92 Yes 30 0.5 Yes -30 0.74 Yes 40 89.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50810128 + NR_033200 LARP4 1 4.84 2.03 60 7.07 74.16 37 8.14 Yes 24 1.3 Yes 31 0.94 Yes -31 0.95 Yes 39 92.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50821547 + NR_033200 LARP4 1 38.7 16.36 72 4.68 83.97 29 5.38 No 43 0.82 Yes 25 0.76 Yes -28 0.82 Yes 42 84.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50809494 + NR_033200 LARP4 1 0.36 0.15 9 3.42 84.41 38 5.04 No 26 0.92 Yes 30 0.5 Yes -30 0.74 Yes 40 89.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50810128 + NR_033200 LARP4 1 2.48 1.08 42 7.07 74.16 37 8.14 Yes 24 1.3 Yes 31 0.94 Yes -31 0.95 Yes 39 92.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50821547 + NR_033200 LARP4 1 2.15 0.99 41 4.68 83.97 29 5.38 No 43 0.82 Yes 25 0.76 Yes -28 0.82 Yes 42 84.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50822699 + NR_033200 LARP4 1 7.47 12.24 72 7.26 86.56 19 5.97 Yes 6 0.74 No 23 0.6 Yes -22 0.57 No 47 44.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 50827076 + NR_033200 LARP4 1 0.07 0.14 8 9.64 85.86 26 7 Yes 13 0.69 No 0 0 No -25 0.67 Yes 45 75.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 50829272 + NR_033200 LARP4 1 0.05 0.13 9 -2.1 81.93 26 5.48 No 25 0.77 Yes 0 0 No -25 0.69 Yes 45 67.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 859197 - NM_015155 LARP4B 1 1.52 2.32 60 10.6 80.23 21 4.24 No 14 0.67 No 22 0.95 Yes -31 0.46 No 44 56.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 863825 - NM_015155 LARP4B 1 0.2 0.53 29 -1.85 0 31 8.17 Yes 18 1.1 Yes 23 0.45 Yes -30 0.85 Yes 40 79.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 864615 - NM_015155 LARP4B 1 0.08 0.21 13 7.23 82.1 43 7.38 Yes 19 0.74 No 0 0 No -31 0.88 Yes 39 89.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 866782 - NM_015155 LARP4B 1 0.09 0.17 9 -1.84 0 32 6 Yes 19 1.01 Yes 0 0 No -31 0.76 Yes 39 86.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 876824 - NM_015155 LARP4B 1 0.07 0.17 10 3.69 72.86 28 6.3 Yes 12 0.25 No 0 0 No -24 0.33 No 43 29.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 888972 - NM_015155 LARP4B 1 0.07 0.13 7 7.71 83.71 21 5.57 Yes 8 0.77 No 0 0 No -24 0.57 No 50 54.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 889194 - NM_015155 LARP4B 1 0.25 0.44 23 5.35 77 27 6.63 Yes 60 1.26 Yes 0 0 No -37 0.53 No 44 58.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 889238 - NM_015155 LARP4B 1 0.5 0.93 43 5.27 77.21 29 5.54 No 16 1.24 Yes 0 0 No -28 0.7 Yes 42 70.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 890380 - NM_015155 LARP4B 1 0.21 0.38 21 7.33 87.07 29 5.71 Yes 60 0.49 No 0 0 No -29 0.78 Yes 41 71.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 907224 - NM_015155 LARP4B 1 0.08 0.15 9 7.15 85.06 42 7.78 Yes 29 1.6 Yes 0 0 No -41 0.83 Yes 29 83.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 911898 - NM_015155 LARP4B 1 0.15 0.22 13 6.25 82.9 83 6.7 Yes 32 1.26 Yes 0 0 No -24 0.83 Yes 46 56.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 916024 - NM_015155 LARP4B 1 7.15 9.92 72 5.08 91.99 34 5.26 No 73 -3.98 No 27 0.24 Yes -27 0.53 No 43 66.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 936770 - NM_015155 LARP4B 1 0.43 0.15 10 8.45 81.07 46 6.78 Yes 33 0.57 No 0 0 No -26 0.63 No 45 51.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 949457 - NM_015155 LARP4B 1 0.27 0.11 7 11.31 95.02 28 5.73 Yes 15 0.21 No 28 0.46 Yes -27 0.7 Yes 43 71.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 957760 - NM_015155 LARP4B 1 0.33 0.14 8 4.61 82.93 17 4.78 No 33 1.28 Yes 0 0 No -20 0.3 No 54 58.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 113559773 + NM_015454 LARP7 1 5.66 1.58 59 6.74 86.29 21 5.87 Yes 62 1.43 Yes 0 0 No -21 0.7 Yes 49 62.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 113565580 + NM_015454 LARP7 1 0.63 0.18 13 8.86 85.41 28 4.61 No 63 1.01 Yes 27 0.42 Yes -32 0.39 No 38 47.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 113566706 + NM_015454 LARP7 1 0.23 0.42 22 9.61 89.49 27 5.28 No 41 0.78 Yes 26 0.87 Yes -26 0.69 Yes 44 70.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 113568190 + NM_015454 LARP7 1 0.04 0.13 8 -11.15 0 21 4.87 No 8 0.74 No 21 0.57 Yes -28 0.68 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 113568208 + NM_015454 LARP7 1 0.24 0.78 33 2.01 68.64 27 5.28 No 26 0.76 No 21 0.57 Yes -26 0.6 No 44 48.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 113568357 + NM_015454 LARP7 1 2.13 3.74 66 -3.97 71.45 25 5.99 Yes 6 0.65 No 21 0.87 Yes -24 0.87 Yes 46 79.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 113568806 + NM_015454 LARP7 1 5.9 13.21 72 8.52 78.51 40 5.97 Yes 1 0.97 Yes 28 0.89 Yes -28 0.78 Yes 42 84.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 113568847 + NM_015454 LARP7 1 0.09 0.19 14 -15.42 0 30 5.47 No 42 0.93 Yes 25 0.3 Yes -29 0.65 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 113568851 + NM_015454 LARP7 1 0.81 1.92 62 -1.55 0 15 3.87 No 46 0.92 Yes 25 0.3 Yes -33 0.67 Yes 37 78.57 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 113571619 + NM_015454 LARP7 1 1.69 3.14 65 5.13 82.1 33 6.24 Yes -4 0.53 No 0 0 No -32 0.87 Yes 38 91.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 113575203 + NM_015454 LARP7 1 0.06 0.15 11 7.67 89.33 28 5.83 Yes 36 0.24 No 25 0.79 Yes -27 0.85 Yes 43 88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 145498638 - NM_001317965 LARS 1 0.29 0.6 29 7.63 94.19 20 5.03 No 69 -4.24 No 0 0 No -19 0.5 No 51 38.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 145502147 - NM_001317965 LARS 1 0.08 0.22 13 2.39 0 34 5.89 Yes 18 1.43 Yes 0 0 No -33 0.7 Yes 37 87.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 145508343 - NM_001317965 LARS 1 1.35 3.32 68 1.65 70.28 32 6.09 Yes 19 0.9 Yes 0 0 No -31 0.55 No 35 66.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 145508610 - NM_001317965 LARS 1 0.14 0.39 19 5.1 81.08 27 5.05 No 3 0.52 No 0 0 No -26 0.88 Yes 44 79.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 145519270 - NM_001317965 LARS 1 0.05 0.14 10 6.5 85.02 21 7.08 Yes 8 1.33 Yes 23 0.88 Yes -20 0.7 Yes 50 86.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 145521200 - NM_001317965 LARS 1 0.44 0.85 38 6.9 86.87 21 7.17 Yes 66 1.29 Yes 0 0 No -20 0.88 Yes 50 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 145521352 - NM_001317965 LARS 1 0.08 0.17 10 8.3 93.96 25 8.45 Yes 17 1.08 Yes 0 0 No -29 0.75 Yes 41 89.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 145525898 - NM_001317965 LARS 1 0.04 0.11 7 -4.21 80.72 52 7.2 Yes 39 2.69 Yes 0 0 No -51 0.7 Yes 19 80.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 145538656 - NM_001317965 LARS 1 0.11 0.24 14 10.5 95.65 27 5.74 Yes 36 -1.82 No 0 0 No -23 0.49 No 50 73.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 145540046 - NM_001317965 LARS 1 0.21 0.36 16 -0.15 0 33 6.49 Yes 20 1.04 Yes 0 0 No -32 0.5 No 34 69.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 145541128 - NM_001317965 LARS 1 0.09 0.17 9 7.84 84.37 41 8.49 Yes 28 1.6 Yes 0 0 No -40 0.88 Yes 30 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 145544033 - NM_001317965 LARS 1 0.16 0.26 12 -8.02 75.51 33 5.9 Yes 20 0.8 Yes 0 0 No -32 0.67 Yes 38 73.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 145550893 - NM_001317965 LARS 1 0.12 0.25 14 6.02 95.84 28 5.29 No 27 -1.05 No 0 0 No -27 0.52 No 16 47.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 145551553 - NM_001317965 LARS 1 0.07 0.17 9 -13.41 0 23 5.02 No 69 1 Yes 0 0 No -28 0.66 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 45430524 + NM_015340 LARS2 1 0.81 0.4 22 8.51 80.41 33 5.11 No 14 0.26 No 26 0.86 Yes -26 0.73 Yes 44 85.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 45430540 + NM_015340 LARS2 1 0.28 0.13 7 5.06 81.41 21 5 No 30 0.25 No 0 0 No -20 0.41 No 50 51.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 45435963 + NM_015340 LARS2 1 0.41 0.22 13 4.01 87.89 23 5.29 No 18 0.71 No 0 0 No -22 0.82 Yes 48 78.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 45441055 + NM_015340 LARS2 1 0.12 0.17 10 10.37 91.25 29 6.74 Yes 13 1.14 Yes 0 0 No -28 0.8 Yes 42 82.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45442156 + NM_015340 LARS2 1 0.22 0.21 12 4.45 82.97 14 5.66 Yes 1 0.11 No 0 0 No -19 0.64 No 51 76.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 45458684 + NM_015340 LARS2 1 0.41 0.28 12 4.78 87.41 24 5.29 No 11 0.36 No 0 0 No -23 0.81 Yes 47 88.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 45462662 + NM_015340 LARS2 1 0.72 0.54 31 6.6 78.19 24 6.16 Yes 11 1.7 Yes 0 0 No -23 0.77 Yes 47 81.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45507704 + NM_015340 LARS2 1 0.34 0.35 18 7.47 85.93 25 5.57 Yes 25 1.06 Yes 0 0 No -24 0.88 Yes 46 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45561184 + NM_015340 LARS2 1 0.99 0.93 43 2.71 84.79 25 5.08 No 2 1.51 Yes 24 0.94 Yes -24 0.9 Yes 46 89.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 45561729 + NM_015340 LARS2 1 0.11 0.11 7 4.29 80.34 24 4.96 No 4 1.24 Yes 0 0 No -23 0.84 Yes 47 93.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45565492 + NM_015340 LARS2 1 0.18 0.18 13 -1.23 0 27 5.94 Yes 58 2 Yes 0 0 No -26 0.86 Yes 44 77.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45579834 + NM_015340 LARS2 1 1.21 0.85 36 7.57 92.97 20 4.87 No 36 1.04 Yes 20 0.43 Yes -20 0.68 Yes 50 70.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 64734851 - NM_001170650 LAS1L 1 8.37 12.82 72 -0.65 69.65 37 6.08 Yes 27 0.37 No 0 0 No -36 0.63 No 31 73.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 64740698 - NM_001170650 LAS1L 1 0.54 0.74 35 1.35 72.18 22 5.19 No 64 -3.15 No 21 0.7 Yes -21 0.89 Yes 49 77.37 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 64741168 - NM_001170650 LAS1L 1 0.93 1.19 49 7.12 82.19 31 6.09 Yes 18 0.58 No 0 0 No -30 0.68 Yes 40 68.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 64741171 - NM_001170650 LAS1L 1 0.59 0.82 39 8.13 85.15 28 5.93 Yes 15 0.58 No 0 0 No -27 0.66 Yes 43 67.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 64742166 - NM_001170650 LAS1L 1 0.43 0.53 27 7.76 75.59 37 6.03 Yes 70 2.41 Yes 0 0 No -36 0.79 Yes 34 85.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 64742374 - NM_001170650 LAS1L 1 0.47 0.57 29 6.65 79.11 33 7 Yes 31 1.38 Yes 0 0 No -32 0.77 Yes 38 90.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 64744495 - NM_001170650 LAS1L 1 16.68 20.53 72 8.21 86.99 28 5.32 No -3 0.37 No 27 0.9 Yes -27 0.76 Yes 43 58.7 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 64749603 - NM_001170650 LAS1L 1 0.25 0.47 27 1.66 73.81 28 5.83 Yes -3 0.06 No 0 0 No -25 0.47 No 45 43.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 37043650 + NR_073384 LASP1 1 0.02 0.11 8 11.13 87.34 27 5.57 Yes 55 1.07 Yes 0 0 No -24 0.64 No 46 68.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 37067416 + NR_073384 LASP1 1 0.05 0.14 8 7.29 90.3 25 6.08 Yes 12 1.5 Yes 0 0 No -24 0.84 Yes 46 82.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37074860 + NR_073384 LASP1 1 0.11 0.28 14 -3.02 68.45 22 5.83 Yes 9 1.74 Yes 0 0 No -21 0.8 Yes 49 85.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73624949 + NM_032464 LAT2 1 0.37 0.67 31 10.15 85.09 43 7 Yes 30 1.23 Yes 0 0 No -29 0.75 Yes 41 71.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73627312 + NM_032464 LAT2 1 0.22 0.43 22 9.28 89.99 13 5.57 Yes 45 1.05 Yes 0 0 No -28 0.69 Yes 42 70.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73629153 + NM_032464 LAT2 1 0.08 0.14 8 -1.56 83.92 49 14 Yes 74 -3.08 No 0 0 No -35 0.28 No 35 41.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 73638794 + NM_032464 LAT2 1 0.16 0.33 18 5.93 81.37 23 5.65 Yes 10 1.61 Yes 0 0 No -22 0.87 Yes 48 87.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73638979 + NM_032464 LAT2 1 0.08 0.24 15 -6.13 0 16 4.47 No 23 1.57 Yes 0 0 No -35 0.76 Yes 35 71.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73639272 + NM_032464 LAT2 1 0.39 1.36 47 7.76 88.24 25 6.29 Yes NA NA NA 24 0.51 Yes -24 0.79 Yes 46 80.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 73640956 + NM_032464 LAT2 1 0.06 0.18 10 3.47 73.93 25 4.67 No 55 -3.69 No 0 0 No -28 0.76 Yes 42 76.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 73641416 + NM_032464 LAT2 1 0.11 0.33 21 6.77 88.8 33 7.14 Yes 67 -1.76 No 0 0 No -46 0.62 No 25 41.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 73643167 + NM_032464 LAT2 1 0.04 0.14 9 7.16 85.7 22 5.93 Yes 9 0.73 No 0 0 No -21 0.82 Yes 49 84.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 73643276 + NM_032464 LAT2 1 0.16 0.53 26 -13.91 68.61 47 7 Yes 34 0.68 No 0 0 No -24 0.74 Yes 24 44.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 149984452 - NR_073033 LATS1 1 1.25 0.57 31 7.71 86.16 20 7.07 Yes 7 1.83 Yes 0 0 No -19 0.54 No 51 78.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 149985779 - NR_073033 LATS1 1 3.02 1.49 51 10.19 97.68 28 6.73 Yes 15 1.88 Yes 0 0 No -27 0.65 No 43 84.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 149990257 - NR_073033 LATS1 1 7.11 3.32 70 4.02 79.48 52 6.87 Yes 1 0.07 No 0 0 No -33 0.61 No 37 55.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 149990887 - NR_073033 LATS1 1 0.18 0.1 7 7.15 80.93 29 6.1 Yes 16 0.58 No 0 0 No -28 0.61 No 37 61.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 149999882 - NR_073033 LATS1 1 15.6 5.67 71 6.46 91.56 24 5 No 11 0.13 No 0 0 No -23 0.8 Yes 47 83.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 21569340 - NM_014572 LATS2 1 1.07 0.15 10 9.23 94.37 27 5.44 No 14 0.68 No 0 0 No -24 0.59 No 46 64.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 21597378 - NM_014572 LATS2 1 1.31 0.19 11 2.35 69.34 19 4.88 No 43 0.2 No 0 0 No -18 0.67 Yes 52 52.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 21599355 - NM_014572 LATS2 1 2.15 0.33 19 8.18 85.86 29 7.75 Yes 16 1.6 Yes 0 0 No -28 0.96 Yes 42 95.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 203740987 + NM_001282878 LAX1 1 1.81 0.72 30 3.43 62.46 23 5.38 No 29 1.13 Yes 0 0 No -22 0.73 Yes 48 86.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 203741130 + NM_001282878 LAX1 1 0.45 0.19 13 5.4 79.48 29 4.81 No 73 1.27 Yes 0 0 No -24 0.4 No 48 34.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 203741199 + NM_001282878 LAX1 1 0.75 0.21 14 -10.11 0 29 5.89 Yes 63 0.52 No 0 0 No -28 0.87 Yes 42 85.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 203742915 + NM_001282878 LAX1 1 2.73 1.56 42 12.32 95.65 53 8.63 Yes 50 0.54 No 0 0 No -44 0.65 No 26 75.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 62437229 - NM_024099 LBHD1 1 2.04 0.17 9 1.66 64.84 38 6.4 Yes 76 1.17 Yes 0 0 No -37 0.83 Yes 33 84.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 225591100 - NM_194442 LBR 1 0.04 0.13 9 -3.48 62.15 61 8.07 Yes 48 1.13 Yes 0 0 No -25 0.57 No 33 82.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 225592385 - NM_194442 LBR 1 0.04 0.15 10 1.3 77.31 34 5.65 Yes 39 0.4 No 0 0 No -26 0.6 No 44 66.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 225600600 - NM_194442 LBR 1 0.03 0.1 7 4.92 68.45 38 6.63 Yes 61 0.75 No 0 0 No -30 0.62 No 33 71.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 225601153 - NM_194442 LBR 1 0.04 0.11 7 6.05 78.64 59 7.91 Yes 22 1.45 Yes 0 0 No -34 0.31 No 36 52.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 225605778 - NM_194442 LBR 1 0.05 0.21 13 8.96 84.26 23 6.16 Yes 10 1.15 Yes 0 0 No -22 0.69 Yes 48 53.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 225607498 - NM_194442 LBR 1 0.58 2.31 59 -1.2 69.27 43 5 No 14 0.62 No 0 0 No -30 0.65 No 40 59.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32741549 + NM_001042771 LCK 1 0.08 0.13 7 1.84 66.99 42 6.53 Yes 66 1.69 Yes 0 0 No -25 0.71 Yes 29 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32745181 + NM_001042771 LCK 1 0.71 1.71 53 5.29 85.02 30 10.17 Yes 17 1.74 Yes 29 0.91 Yes -29 0.95 Yes 41 95.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 32745414 + NM_001042771 LCK 1 0.14 0.33 24 -0.82 74.02 22 4.67 No 51 -4.46 No 29 0.81 Yes -21 0.95 Yes 49 88.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 30682417 + NM_001002257 LCLAT1 1 29.67 3.99 67 8.75 90.61 44 6.8 Yes 54 0.29 No 44 0.15 Yes -44 0.37 No 27 65.24 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 30699442 + NM_001002257 LCLAT1 1 10.02 1.31 49 9.93 83.58 32 4.88 No 19 1.41 Yes 31 0.81 Yes -31 0.63 No 39 82.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 30775358 + NM_001002257 LCLAT1 1 4.4 2.08 56 8.98 90.48 37 5.4 No 24 1.39 Yes 29 0.54 Yes -29 0.63 No 41 69.6 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 30785260 + NM_001002257 LCLAT1 1 0.35 0.17 10 5.61 83.84 14 5.03 No 46 1.25 Yes 0 0 No -22 0.74 Yes 48 66.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 30786871 + NM_001002257 LCLAT1 1 0.4 0.17 9 8.9 90.62 31 5.46 No -1 0.34 No 0 0 No -30 0.6 No 40 73.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 30790932 + NM_001002257 LCLAT1 1 0.31 0.14 8 -3.81 0 10 4 No 50 1.38 Yes 0 0 No -31 0.58 No 39 69.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 30828881 + NM_001002257 LCLAT1 1 2.72 1.44 51 4.44 81.04 31 6.7 Yes 18 1.8 Yes 30 0.87 Yes -30 0.82 Yes 40 92.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 25137284 + NM_016309 LCMT1 1 8.35 2.5 59 10.97 90.62 26 8.32 Yes 13 1.18 Yes 25 0.72 Yes -25 0.76 Yes 45 72.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 25137398 + NM_016309 LCMT1 1 0.42 0.11 7 5.17 83.92 17 4.8 No 19 0.32 No 0 0 No -22 0.7 Yes 48 75.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 25145402 + NM_016309 LCMT1 1 0.82 0.61 28 9.55 92.63 21 6.04 Yes 8 1.45 Yes 0 0 No -24 0.81 Yes 46 82.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 25145528 + NM_016309 LCMT1 1 0.4 0.32 17 7.42 76.76 37 6.15 Yes 24 1.43 Yes 0 0 No -22 0.73 Yes 34 78.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 25180607 + NM_016309 LCMT1 1 0.15 0.11 7 8.28 92.93 18 4.8 No 71 -2.63 No 0 0 No -20 0.81 Yes 50 77.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 98593533 + NM_001170766 LCOR 1 16.77 2.9 65 10.47 88.96 20 7.21 Yes 7 1.3 Yes 0 0 No -19 0.81 Yes 51 91.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 98618048 + NM_001170766 LCOR 1 6.17 0.99 41 7.66 91.45 21 6.63 Yes 8 1.34 Yes 0 0 No -28 0.57 No 42 67.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 98644159 + NM_001170766 LCOR 1 3.84 0.69 35 9.67 90.92 28 5.48 No 15 0.94 Yes 0 0 No -27 0.73 Yes 43 78.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 98667772 + NM_001170766 LCOR 1 0.49 0.18 9 2.73 84.41 50 7.89 Yes 37 0.43 No 0 0 No -49 0.74 Yes 21 87.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 98669853 + NM_001170766 LCOR 1 0.27 0.11 8 5.13 78.05 26 5.68 Yes 40 0.15 No 0 0 No -34 0.39 No 49 52.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 98711837 + NM_001170766 LCOR 1 0.36 0.21 13 6.81 88.8 12 3.76 No 49 1.46 Yes 24 0.85 Yes -61 0.46 No 40 68.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 17895207 - NM_153686 LCORL 1 2 0.63 30 7.51 86.51 28 6.44 Yes 15 0.76 No 0 0 No -27 0.67 Yes 43 77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 17915029 - NM_153686 LCORL 1 0.94 0.44 20 9.7 98.23 19 6.14 Yes 76 1.6 Yes 0 0 No -19 0.53 No 39 58.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 17961935 - NM_153686 LCORL 1 13.55 5.32 71 4.44 79.27 28 5.26 No 75 0.54 No 27 0.87 Yes -27 0.63 No 43 84.33 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 18011602 - NM_153686 LCORL 1 0.46 0.1 7 10.92 83.12 42 6.44 Yes 59 0.91 Yes 0 0 No -41 0.58 No 29 89.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 46701857 - NM_002298 LCP1 1 0 0.28 14 -5.18 0 28 6.37 Yes 26 1.19 Yes 0 0 No -27 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 46701858 - NM_002298 LCP1 1 0.01 0.35 20 -7.33 0 27 6.3 Yes 25 1.19 Yes 0 0 No -26 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 46705159 - NM_002298 LCP1 1 0.01 0.31 18 6.48 80.34 30 4.73 No 53 -5.35 No 0 0 No -27 0.51 No 53 54.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46709650 - NM_002298 LCP1 1 0.01 0.26 10 6.13 93.77 13 5.29 No 38 0.62 No 0 0 No -21 0.42 No 49 70.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 46717509 - NM_002298 LCP1 1 0.01 0.63 29 7.27 83.39 30 5.25 No -3 0.49 No 0 0 No -25 0.96 Yes 45 96.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 46721233 - NM_002298 LCP1 1 0 0.17 12 -8.42 0 10 3.06 No 15 1 Yes 0 0 No -27 0.9 Yes 43 82.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46721238 - NM_002298 LCP1 1 0.01 0.22 14 -6.44 0 23 5.38 No 10 1.01 Yes 0 0 No -22 0.92 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 46721278 - NM_002298 LCP1 1 0 0.18 11 -14.47 75.22 48 7.28 Yes 47 0.83 Yes 21 0.8 Yes -29 0.7 Yes 41 69.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 46722944 - NM_002298 LCP1 1 0.07 2.01 61 4.76 64.81 100 10.92 Yes 68 1.47 Yes 23 0.72 Yes -35 0.42 No 24 66.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 46725190 - NM_002298 LCP1 1 0.01 0.15 10 -3.75 0 20 5.74 Yes 7 1.37 Yes 0 0 No -57 0.62 No 13 79.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 46725212 - NM_002298 LCP1 1 0.01 0.35 22 -17.49 0 64 5.9 Yes 51 1.23 Yes 0 0 No -35 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 46728078 - NM_002298 LCP1 1 0 0.14 9 3.83 78.21 95 7.45 Yes 19 1.54 Yes 0 0 No -31 0.85 Yes 39 93.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46730704 - NM_002298 LCP1 1 0.03 1.61 57 -2.78 77 24 4.45 No 5 0.52 No 0 0 No -23 0.89 Yes 47 87.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 46733008 - NM_002298 LCP1 1 0.01 0.17 10 1.26 82.08 23 5.14 No 63 0.5 No 0 0 No -22 0.53 No 48 61.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46733150 - NM_002298 LCP1 1 0.02 0.75 24 3.95 66.39 28 5.64 Yes 46 1.53 Yes 21 0.78 Yes -27 0.86 Yes 43 58.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 46733173 - NM_002298 LCP1 1 0.01 0.39 18 6.68 69.47 14 5.42 No 23 1.54 Yes 0 0 No -28 0.55 No 42 65.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 46733224 - NM_002298 LCP1 1 0.01 0.47 12 2.93 65.61 40 7.33 Yes 27 1.99 Yes 0 0 No -16 0.49 No 47 41.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 46734806 - NM_002298 LCP1 1 0.06 1.71 51 6.79 77.86 37 5.11 No -3 0.86 Yes 0 0 No -36 0.54 No 34 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 46742730 - NM_002298 LCP1 1 0.17 4.81 71 1.66 72.37 31 4.79 No 4 0.12 No 0 0 No -31 0.82 Yes 39 80.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 46744204 - NM_002298 LCP1 1 0.03 0.83 37 6.81 76.24 27 6.13 Yes 75 -4.64 No 0 0 No -26 0.64 No 44 77.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 46744642 - NM_002298 LCP1 1 0.01 0.21 14 6.84 78.4 25 5.45 No 35 0.93 Yes 0 0 No -25 0.85 Yes 45 83.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46753750 - NM_002298 LCP1 1 0.02 0.46 25 5.65 79.1 45 9.3 Yes 1 1.29 Yes 0 0 No -29 0.61 No 41 79.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 46754254 - NM_002298 LCP1 1 0.01 0.25 12 11.01 83.34 17 5.92 Yes 4 1.86 Yes 0 0 No -28 0.62 No 42 58.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 46756158 - NM_002298 LCP1 1 0.02 0.51 27 8.43 92.29 46 7.87 Yes 73 0.62 No 0 0 No -33 0.52 No 29 62.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20898433 - NM_001282719 LDAH 1 0.33 0.22 13 2.49 0 42 4.95 No 69 1.01 Yes 0 0 No -34 0.71 Yes 36 76.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 21008986 - NM_001282719 LDAH 1 0.16 0.1 7 7.46 85.02 26 6.08 Yes 13 1.33 Yes 0 0 No -25 0.93 Yes 45 94.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103868080 - NM_003893 LDB1 1 0.46 0.11 8 -6.36 0 29 6.29 Yes 16 -0.3 No 0 0 No -28 0.66 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 103868932 - NM_003893 LDB1 1 0.07 0.11 7 -7.64 0 25 5.56 Yes 12 0.89 Yes 0 0 No -24 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 103871075 - NM_003893 LDB1 1 0.3 0.5 26 5.11 72.87 30 7.34 Yes 17 1.18 Yes 21 0.95 Yes -29 0.69 Yes 41 64.88 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 18422176 + NM_001165414 LDHA 1 0 0.14 9 6.99 89.28 21 5.81 Yes 5 0.73 No 25 0.5 Yes -25 0.29 No 45 42.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 18425221 + NM_001165414 LDHA 1 0 0.13 8 -1.5 49.88 29 5.19 No 68 0.06 No 26 0.62 Yes -28 0.67 Yes 42 61.84 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 18428698 + NM_001165414 LDHA 1 0.01 0.18 12 4.81 72.68 14 3.59 No 1 0.74 No 0 0 No -24 0.37 No 50 32.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 18428720 + NM_001165414 LDHA 1 0.08 1.51 53 5.26 74.39 25 5.57 Yes 23 0.7 No 0 0 No -24 0.87 Yes 46 87.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 21790118 - NM_002300 LDHB 1 0 0.19 9 -2 0 14 4.08 No 22 1.19 Yes 0 0 No -43 0.64 No 32 83.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 21796998 - NM_002300 LDHB 1 0 0.1 7 -0.08 0 22 4.58 No 63 0.12 No 0 0 No -21 0.73 Yes 49 60.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 21799949 - NM_002300 LDHB 1 0.02 0.58 29 -24.9 0 25 6.32 Yes 12 1.91 Yes 0 0 No -24 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 21806931 - NM_002300 LDHB 1 0.02 0.56 28 9.29 89.71 24 5.86 Yes 68 1.62 Yes 0 0 No -18 0.65 No 52 72.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 11226696 + NM_000527 LDLR 1 0.36 0.28 16 6.52 90.42 21 5.19 No 8 0.93 Yes 0 0 No -20 0.85 Yes 50 78.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11241962 + NM_000527 LDLR 1 1.69 0.96 44 -6.99 0 14 3.87 No 25 1.22 Yes 31 0.88 Yes -37 0.87 Yes 33 93.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 13638471 + NM_181482 LDLRAD4 1 2.22 0.15 10 9.11 92.66 38 6.86 Yes 70 0.84 Yes 0 0 No -37 0.37 No 33 51.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13639359 + NM_181482 LDLRAD4 1 3.02 0.28 18 4.39 79.8 21 5.19 No 8 1.08 Yes 0 0 No -20 0.79 Yes 50 90.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 13643357 + NM_181482 LDLRAD4 1 467.76 35.71 72 9.67 87.71 56 8.52 Yes 43 2.02 Yes 26 0.6 Yes -55 0.93 Yes 15 94.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 25885561 + NM_015627 LDLRAP1 1 0.2 0.13 8 12.58 93.02 24 6.31 Yes 49 1.1 Yes 0 0 No -23 0.43 No 48 53.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 25891666 + NM_015627 LDLRAP1 1 3.7 1.49 56 -12.51 74.32 28 6.39 Yes 15 0.58 No 24 0.92 Yes -27 0.97 Yes 43 94.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 25891852 + NM_015627 LDLRAP1 1 0.4 0.24 15 4.5 83.13 33 5.12 No 54 -2.94 No 0 0 No -24 0.68 Yes 46 80.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25892053 + NM_015627 LDLRAP1 1 0.16 0.1 7 10.75 100 29 6.91 Yes 53 0.41 No 0 0 No -28 0.86 Yes 42 89.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25893325 + NM_015627 LDLRAP1 1 0.23 0.15 10 4.25 75.24 24 5.1 No 11 1.51 Yes 19 0.96 Yes -23 0.95 Yes 47 91.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 108994191 - NM_001166119 LEF1 1 1.28 0.58 24 2.78 72.46 21 6.08 Yes 8 1.23 Yes 0 0 No -20 0.71 Yes 50 59.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 33752297 - NM_001143944 LEMD2 1 0.6 0.26 16 3.01 78.14 21 5.2 No 68 -0.49 No 0 0 No -20 0.48 No 42 31.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 65604708 + NM_014319 LEMD3 1 2.86 2.61 66 3.89 75.54 33 6.5 Yes 20 1.97 Yes 0 0 No -32 0.83 Yes 38 95.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 65612334 + NM_014319 LEMD3 1 0.53 0.42 23 -11.29 71.29 25 5.14 No 1 0.53 No 0 0 No -24 0.65 No 46 63.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 65612614 + NM_014319 LEMD3 1 1.08 0.65 37 9.08 92.17 28 5.29 No 42 1.02 Yes 0 0 No -54 0.64 No 16 76.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 65619814 + NM_014319 LEMD3 1 0.17 0.11 8 11.16 95.89 18 6.71 Yes 5 1.9 Yes 0 0 No -24 0.85 Yes 46 88.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 65632288 + NM_014319 LEMD3 1 0.24 0.17 11 3.9 0 10 4 No 64 -3.05 No 0 0 No -31 0.47 No 39 68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 65633714 + NM_014319 LEMD3 1 0.14 0.13 9 -4 0 16 3.87 No 33 1.01 Yes 0 0 No -15 0.41 No 44 24.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 65633762 + NM_014319 LEMD3 1 0.2 0.15 11 -7.18 57.14 47 7.55 Yes 34 0.78 Yes 0 0 No -46 0.85 Yes 24 77.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 65633765 + NM_014319 LEMD3 1 0.61 0.49 25 -9.73 46.5 50 7.75 Yes 37 0.77 No 0 0 No -49 0.82 Yes 21 69.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 54963709 + NM_052925 LENG8 1 0.35 0.39 23 6.85 82.65 10 4.9 No -3 0.4 No 0 0 No -21 0.62 No 49 51.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 54968912 + NM_052925 LENG8 1 0.14 0.13 7 -2.81 0 14 4.47 No 64 0.31 No 20 0.75 Yes -19 0.53 No 57 28.48 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 54972405 + NM_052925 LENG8 1 2.38 1.15 37 3.74 75.67 39 5.89 Yes 26 1.21 Yes 38 0.83 Yes -38 0.65 No 32 79.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 54972429 + NM_052925 LENG8 1 1 0.5 28 7.06 77.37 27 5.74 Yes 24 1.61 Yes 0 0 No -26 0.83 Yes 44 87.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52251008 - NM_001323903 LEO1 1 0.29 0.39 21 2.76 86.61 25 5 No 54 0.92 Yes 0 0 No -25 0.64 No 45 30.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 52252319 - NM_001323903 LEO1 1 0.09 0.14 9 6.84 87.11 22 4.42 No 9 0.7 No 0 0 No -21 0.59 No 49 53.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 52254714 - NM_001323903 LEO1 1 0.13 0.15 10 3.06 74.75 67 8.95 Yes 6 0.19 No 32 0.63 Yes -23 0.67 Yes 47 69.36 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 52258453 - NM_001323903 LEO1 1 0.13 0.1 7 2.93 74.38 25 5 No -3 0.9 Yes 0 0 No -24 0.93 Yes 46 61.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 29961877 + NM_015344 LEPROTL1 1 0.62 0.82 37 4.38 69.3 61 6.67 Yes 70 1.6 Yes 0 0 No -30 0.71 Yes 40 56.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 29962249 + NM_015344 LEPROTL1 1 0.18 0.26 14 4.64 84.41 35 7.55 Yes 22 2.3 Yes 34 0.91 Yes -34 0.94 Yes 36 96.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1818633 - NM_012318 LETM1 1 0.54 1.32 45 -1.6 0 15 4.21 No 49 2.06 Yes 0 0 No -29 0.56 No 41 60.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 1824037 - NM_012318 LETM1 1 3.45 6.14 71 2.61 79.69 41 7.85 Yes 28 -0.25 No 0 0 No -40 0.57 No 30 75.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 1824145 - NM_012318 LETM1 1 0.09 0.17 10 8.34 83.4 14 5.67 Yes 57 -3.22 No 0 0 No -17 0.58 No 43 71.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 1824853 - NM_012318 LETM1 1 0.09 0.15 9 -5.37 0 10 3.87 No 20 1.04 Yes 0 0 No -32 0.87 Yes 38 85.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1824877 - NM_012318 LETM1 1 0.05 0.11 7 7.47 73.69 9 6.4 Yes -4 0.9 Yes 26 0.96 Yes -34 0.35 No 36 54.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 1847004 - NM_012318 LETM1 1 0.2 0.26 13 5.1 81.49 21 4.69 No 15 0.86 Yes 0 0 No -20 0.78 Yes 50 78.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1848357 - NM_012318 LETM1 1 0.54 0.75 34 8.38 84.71 33 6.54 Yes 20 1.19 Yes 32 0.76 Yes -32 0.52 No 38 77.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 51445870 + NR_045017 LETMD1 1 0.56 0.18 11 -9.01 75.08 31 7.22 Yes 18 0.57 No 25 0.69 Yes -25 0.65 No 45 56.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 51447594 + NR_045017 LETMD1 1 38.87 11.68 72 6.54 85.81 20 4.69 No 68 0.71 No 19 0.92 Yes -19 0.88 Yes 51 94.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 51449769 + NR_045017 LETMD1 1 2.13 1.17 48 9.92 89.27 23 5.76 Yes 10 0.27 No 22 0.8 Yes -32 0.7 Yes 38 86.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 51450136 + NR_045017 LETMD1 1 0.29 0.21 10 -3.74 0 45 7.4 Yes 32 1 Yes 25 0.86 Yes -44 0.87 Yes 26 86.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 51447594 + NR_045017 LETMD1 1 2.25 0.69 35 6.54 85.81 20 4.69 No 68 0.71 No 19 0.92 Yes -19 0.88 Yes 51 94.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 51449932 + NR_045017 LETMD1 1 0.32 0.24 13 -0.91 0 9 3.79 No 23 1.16 Yes 29 0.91 Yes -35 0.84 Yes 35 94.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 51449932 + NR_045017 LETMD1 1 1.9 1.4 52 -0.91 0 9 3.79 No 23 1.16 Yes 29 0.91 Yes -35 0.84 Yes 35 94.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 51451788 + NR_045017 LETMD1 1 0.54 0.4 20 5.32 73.78 55 7.07 Yes 61 1.2 Yes 23 0.47 Yes -20 0.59 No 50 57.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 51451806 + NR_045017 LETMD1 1 0.91 0.64 32 -11.57 76.38 28 4.39 No 26 0.46 No 28 0.54 Yes -20 0.63 No 50 57.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 51453146 + NR_045017 LETMD1 1 0.73 0.75 36 2.08 73.91 19 6.16 Yes 6 1.9 Yes 0 0 No -18 0.63 No 52 68.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 38072862 + NM_002305 LGALS1 1 0.21 4.72 67 5.55 88.94 22 3.94 No 2 0.71 No 21 0.81 Yes -19 0.78 Yes 51 85.07 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38072921 + NM_002305 LGALS1 1 0 0.11 7 4.88 78.09 20 6.44 Yes 61 0.66 No 0 0 No -23 0.49 No 47 45.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 38074382 + NM_002305 LGALS1 1 0.35 6.54 67 5.12 77.97 21 4.6 No 61 -3.47 No 25 0.75 Yes -25 0.75 Yes 50 42.5 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 38074512 + NM_002305 LGALS1 1 0.01 0.21 13 -1.76 53.63 33 5.6 Yes 33 1.5 Yes 0 0 No -45 0.71 Yes 25 74.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38075611 + NM_002305 LGALS1 1 0.01 0.18 12 -17.45 0 24 7.55 Yes 11 1.61 Yes 0 0 No -23 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 38075630 + NM_002305 LGALS1 1 0.01 0.14 9 5.04 82.28 13 4.34 No 30 1.6 Yes 0 0 No -42 0.79 Yes 28 95.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40171610 + NR_034156 LGALS17A 1 0.51 0.14 8 8.56 89.6 18 6.46 Yes 5 1.28 Yes 0 0 No -25 0.79 Yes 45 91.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55610165 + NR_003225 LGALS3 1 0.03 0.1 7 3.79 0 29 5.54 No 16 0.3 No 29 0.89 Yes -29 0.92 Yes 41 90.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 55611812 + NR_003225 LGALS3 1 0.15 0.71 27 4.39 72.45 26 6.05 Yes 13 0.94 Yes 25 0.87 Yes -25 0.79 Yes 45 84.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 236706214 + NM_201544 LGALS8 1 110.74 39.46 72 5.18 89.17 24 5 No 23 0.74 No 23 0.96 Yes -23 0.94 Yes 47 97.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 236708461 + NM_201544 LGALS8 1 0.59 0.46 23 6.08 70.18 33 8.03 Yes 20 0.97 Yes 23 0.84 Yes -23 0.63 No 38 89.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 25967668 + NM_009587 LGALS9 1 2.54 8.9 72 4.24 74.22 34 7.07 Yes 21 0.94 Yes 33 0.62 Yes -33 0.74 Yes 37 83.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 25967990 + NM_009587 LGALS9 1 0.03 0.11 8 9.42 83.9 25 6.32 Yes 53 1.11 Yes 0 0 No -24 0.88 Yes 46 91.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 25970858 + NM_009587 LGALS9 1 0.76 0.57 27 5.75 78.71 42 6.53 Yes 15 1.11 Yes 0 0 No -27 0.88 Yes 43 95.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 25974277 + NM_009587 LGALS9 1 0.37 1.51 49 -4.86 0 10 3.87 No 48 -4.48 No 20 0.71 Yes -24 0.49 No 59 55.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 25974383 + NM_009587 LGALS9 1 0.89 3.1 70 3.41 71.64 30 5.55 No 30 0.97 Yes 0 0 No -29 0.93 Yes 41 72.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 93178090 - NM_005606 LGMN 1 0.08 0.24 15 -2.44 0 24 6.24 Yes 11 1.53 Yes 0 0 No -23 0.85 Yes 47 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 93178300 - NM_005606 LGMN 1 0.11 0.35 20 -15.3 0 27 5.55 No 14 0.64 No 0 0 No -26 0.74 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 93180868 - NM_005606 LGMN 1 0.07 0.17 10 7.07 79.36 14 8.86 Yes 1 0.36 No 0 0 No -26 0.7 Yes 40 53.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 93185186 - NM_005606 LGMN 1 0.15 0.38 20 1.97 0 31 5.84 Yes 11 0.27 No 0 0 No -30 0.6 No 47 53.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 93197765 - NM_005606 LGMN 1 0.04 0.15 10 11.29 94.8 33 6.55 Yes 61 -4.64 No 0 0 No -32 0.38 No 38 63.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 93200156 - NM_005606 LGMN 1 0.21 0.35 19 9.23 81.81 29 5.54 No 16 0.6 No 28 0.9 Yes -28 0.91 Yes 42 96.4 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 93207525 - NM_005606 LGMN 1 2.89 4.32 56 10.95 96.95 33 6.16 Yes 50 0.81 Yes 32 0.63 Yes -32 0.54 No 38 60.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 93208205 - NM_005606 LGMN 1 0.51 0.61 29 8.26 87.22 20 5.65 Yes 58 1.05 Yes 25 0.57 Yes -22 0.56 No 45 60.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 93209363 - NM_005606 LGMN 1 0.13 0.18 11 2.61 0 31 6.08 Yes 57 0.41 No 0 0 No -33 0.9 Yes 37 86.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 77787149 - NM_005779 LHFPL2 1 0.87 0.53 29 6.89 91.22 33 6.91 Yes 62 1.85 Yes 31 0.47 Yes -32 0.57 No 38 67.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 77790355 - NM_005779 LHFPL2 1 4.51 2.49 68 12.19 93.95 36 6 Yes 23 2.4 Yes 0 0 No -29 0.6 No 35 66.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 77790355 - NM_005779 LHFPL2 1 0.17 0.11 8 12.19 93.95 36 6 Yes 23 2.4 Yes 0 0 No -29 0.6 No 35 66.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 77803987 - NM_005779 LHFPL2 1 2.39 1.35 54 8.22 83.76 22 6.56 Yes 9 1.45 Yes 0 0 No -21 0.82 Yes 49 68.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 77819912 - NM_005779 LHFPL2 1 1.71 0.88 38 9.79 81.63 26 5.97 Yes 13 0.87 Yes 0 0 No -23 0.36 No 45 43.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 77824933 - NM_005779 LHFPL2 1 0.5 0.25 16 11.62 95.65 29 7.62 Yes 16 1.05 Yes 0 0 No -28 0.92 Yes 42 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77846730 - NM_005779 LHFPL2 1 3.03 1.56 46 6.56 85.67 25 5.12 No 12 0.36 No 0 0 No -30 0.25 No 45 32.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 77857262 - NM_005779 LHFPL2 1 0.36 0.17 11 -0.83 66.9 20 4.24 No 75 0.22 No 0 0 No -19 0.6 No 51 56.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 77864510 - NM_005779 LHFPL2 1 0.21 0.11 8 5.26 78.42 27 7.77 Yes 14 1.86 Yes 0 0 No -22 0.62 No 44 74.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 77886016 - NM_005779 LHFPL2 1 0.18 0.1 7 9.55 81.49 50 8.91 Yes 37 2.24 Yes 25 0.02 Yes -49 0.92 Yes 21 97.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 77889129 - NM_005779 LHFPL2 1 0.65 0.46 24 10.18 93.37 30 5.57 Yes 17 1.31 Yes 0 0 No -24 0.78 Yes 46 80.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77900593 - NM_005779 LHFPL2 1 2.88 1.97 56 7.51 87.41 34 6 Yes 21 1.54 Yes 0 0 No -33 0.82 Yes 37 78.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77914475 - NM_005779 LHFPL2 1 0.2 0.13 7 5.88 71.15 33 5.58 Yes -4 0.99 Yes 0 0 No -32 0.66 Yes 38 74.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77914561 - NM_005779 LHFPL2 1 0.21 0.14 10 4.13 75.92 24 3.53 No 59 0.42 No 0 0 No -23 0.79 Yes 47 63.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 77922475 - NM_005779 LHFPL2 1 0.45 0.31 17 7.17 81.96 30 7.28 Yes 76 0.79 Yes 29 0.83 Yes -29 0.93 Yes 41 94.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 77927406 - NM_005779 LHFPL2 1 0.41 0.31 17 7.98 90.85 20 5.66 Yes 7 1.81 Yes 0 0 No -19 0.64 No 51 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 77943398 - NM_005779 LHFPL2 1 2.77 1.28 52 6.53 80.54 20 5.1 No 15 0.06 No 0 0 No -27 0.65 No 43 89.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 77943635 - NM_005779 LHFPL2 1 0.4 0.17 11 9.71 84.46 35 5.17 No 27 -1.07 No 0 0 No -35 0.42 No 35 74.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 39467636 + NM_006859 LIAS 1 1.12 0.38 17 6.05 83.06 27 5.01 No 64 0.45 No 26 0.88 Yes -26 0.39 No 44 36.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 39469396 + NM_006859 LIAS 1 0.66 0.33 19 10.89 92.08 26 5.85 Yes 40 1.18 Yes 0 0 No -25 0.31 No 45 37.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39471642 + NM_006859 LIAS 1 0.3 0.17 11 2.69 0 28 5.38 No 15 1.33 Yes 0 0 No -27 0.8 Yes 43 90.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48619532 - NR_135497 LIG1 1 0.1 0.11 7 3.56 80.12 24 7.42 Yes 11 1.29 Yes 0 0 No -23 0.89 Yes 47 90.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48625582 - NR_135497 LIG1 1 0.07 0.11 8 7.84 84.98 23 5.68 Yes 67 -3.56 No 0 0 No -27 0.32 No 43 63.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 48626611 - NR_135497 LIG1 1 0.13 0.26 15 4.54 77.82 35 5.77 Yes 46 1.21 Yes 28 0.89 Yes -28 0.76 Yes 42 74.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48627828 - NR_135497 LIG1 1 0.08 0.17 10 3.02 73.72 34 7.12 Yes 21 0.87 Yes 0 0 No -33 0.87 Yes 37 91.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48628867 - NR_135497 LIG1 1 0.07 0.18 11 8.39 88.19 54 7.63 Yes 41 1.23 Yes 0 0 No -30 0.6 No 50 66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 48641017 - NR_135497 LIG1 1 0.72 0.67 31 -2.36 73.48 23 4.69 No 48 -4.67 No 21 0.39 Yes -21 0.44 No 55 51.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 48641457 - NR_135497 LIG1 1 0.23 0.22 13 5.58 81.33 23 4.88 No 10 0.98 Yes 0 0 No -22 0.8 Yes 48 80.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48641511 - NR_135497 LIG1 1 0.09 0.1 7 6.78 78.15 25 5.29 No 51 -5.46 No 0 0 No -24 0.82 Yes 46 73.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48643740 - NR_135497 LIG1 1 0.14 0.25 13 8.1 85.3 17 5.64 Yes 4 0.27 No 0 0 No -19 0.41 No 54 52.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 48646600 - NR_135497 LIG1 1 0.09 0.17 10 4.39 77.46 27 6.63 Yes 14 1.16 Yes 0 0 No -26 0.84 Yes 44 87.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48653462 - NR_135497 LIG1 1 0.27 0.4 24 -5.31 0 14 3.87 No 10 1.08 Yes 0 0 No -13 0.52 No 40 36.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 48653465 - NR_135497 LIG1 1 1.2 1.76 61 -5.32 65.39 20 5.1 No 7 1.1 Yes 0 0 No -19 0.58 No 43 41.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 48653482 - NR_135497 LIG1 1 0.11 0.15 11 -8.68 64.16 25 5.17 No 59 -4.23 No 24 0.75 Yes -24 0.71 Yes 46 63.51 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 48654594 - NR_135497 LIG1 1 45.77 42.39 72 -1.58 71.8 24 7.54 Yes 11 2.11 Yes 20 0.92 Yes -23 0.85 Yes 47 78.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48654594 - NR_135497 LIG1 1 0.12 0.11 8 -1.58 71.8 24 7.54 Yes 11 2.11 Yes 20 0.92 Yes -23 0.85 Yes 47 78.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48654643 - NR_135497 LIG1 1 0.52 0.49 29 4.44 75.49 16 5.09 No 49 -2.8 No 21 0.59 Yes -21 0.76 Yes 49 58.71 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 48654992 - NR_135497 LIG1 1 0.69 0.67 29 7.77 88.82 22 6 Yes 9 0.7 No 0 0 No -21 0.97 Yes 49 97.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 48655152 - NR_135497 LIG1 1 0.48 0.43 25 9.06 89.4 34 6.14 Yes 21 0.89 Yes 0 0 No -34 0.58 No 47 87.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 48660395 - NR_135497 LIG1 1 0.25 0.38 18 1.65 73.82 32 5.74 Yes 19 1.58 Yes 0 0 No -31 0.92 Yes 39 95.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33308499 + NM_002311 LIG3 1 0.56 0.28 17 6.8 73.93 62 8.1 Yes 64 -2.21 No 30 0.63 Yes -30 0.56 No 40 76.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 33318747 + NM_002311 LIG3 1 0.17 0.14 9 4.58 86.5 16 4.69 No 42 0.18 No 0 0 No -24 0.62 No 46 75.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33318747 + NM_002311 LIG3 1 0.63 0.43 26 4.58 86.5 16 4.69 No 42 0.18 No 0 0 No -24 0.62 No 46 75.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33318773 + NM_002311 LIG3 1 0.22 0.14 8 6.32 91.5 21 4.97 No 68 0.18 No 0 0 No -23 0.83 Yes 49 58.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33319547 + NM_002311 LIG3 1 0.3 0.22 11 -2.56 0 48 7 Yes 40 -0.55 No 0 0 No -42 0.57 No 28 72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33321272 + NM_002311 LIG3 1 0.3 0.17 12 -0.91 0 16 3.57 No 47 1.05 Yes 23 0.55 Yes -15 0.67 Yes 44 50.66 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 33325218 + NM_002311 LIG3 1 0.18 0.11 8 4.33 70.46 36 5.45 No 23 1.86 Yes 31 0.95 Yes -35 0.74 Yes 35 85.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 33325241 + NM_002311 LIG3 1 0.16 0.1 7 0.09 0 31 5.56 Yes 13 0 No 0 0 No -25 0.56 No 45 49.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33328109 + NM_002311 LIG3 1 0.23 0.11 7 7.44 86.34 21 7.21 Yes 8 1.25 Yes 0 0 No -20 0.87 Yes 50 93.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55142403 + NM_001081637 LILRB1 1 1.33 1.51 51 8.45 80.52 20 5.66 Yes 65 1.37 Yes 0 0 No -19 0.45 No 51 45.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 55143003 + NM_001081637 LILRB1 1 0.13 0.14 8 5.1 81.25 24 5.1 No 53 1.1 Yes 0 0 No -23 0.65 No 47 77.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 55143023 + NM_001081637 LILRB1 1 1.42 1.32 49 4.7 83.81 23 4.9 No 73 1.1 Yes 0 0 No -26 0.85 Yes 44 70.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55143105 + NM_001081637 LILRB1 1 0.45 0.33 17 2.67 76.72 16 5.92 Yes 65 -5.49 No 0 0 No -28 0.7 Yes 45 57.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 55143941 + NM_001081637 LILRB1 1 0.25 0.31 20 -0.25 75.59 19 4.69 No 30 1.41 Yes 0 0 No -18 0.8 Yes 52 79.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55143946 + NM_001081637 LILRB1 1 0.09 0.1 7 1.21 0 24 5.2 No 35 1.4 Yes 0 0 No -23 0.82 Yes 47 74.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55144030 + NM_001081637 LILRB1 1 0.09 0.1 7 3.23 79.81 21 4.89 No 20 0.78 Yes 0 0 No -21 0.92 Yes 49 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55144439 + NM_001081637 LILRB1 1 0.76 0.58 29 -10.24 0 18 4.24 No 66 -4.65 No 29 0.74 Yes -17 0.7 Yes 44 34.65 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 55144471 + NM_001081637 LILRB1 1 0.31 0.29 19 5.51 0 23 6.4 Yes 73 -2.17 No 0 0 No -34 0.58 No 48 64.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 55144501 + NM_001081637 LILRB1 1 4.36 3.79 70 7.23 81.91 24 5.1 No 11 0.62 No 0 0 No -23 0.86 Yes 47 67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 55144549 + NM_001081637 LILRB1 1 0.14 0.11 8 2.27 76.22 16 5.45 No 3 1.28 Yes 25 0.96 Yes -21 0.38 No 42 41.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 55145424 + NM_001081637 LILRB1 1 6.79 3.43 67 7 83.8 24 6.08 Yes 11 1.93 Yes 20 0.88 Yes -23 0.94 Yes 47 86.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 55145424 + NM_001081637 LILRB1 1 60.91 31.13 72 7 83.8 24 6.08 Yes 11 1.93 Yes 20 0.88 Yes -23 0.94 Yes 47 86.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 55145952 + NM_001081637 LILRB1 1 0.24 0.14 9 5.74 87.17 25 4.97 No 12 1.26 Yes 0 0 No -24 0.92 Yes 46 91.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55146038 + NM_001081637 LILRB1 1 2.58 1.43 51 -1.79 74.75 13 4.8 No 19 -1.51 No 19 0.78 Yes -19 0.84 Yes 51 63.99 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 55146041 + NM_001081637 LILRB1 1 1.8 1.03 42 -2.43 69.74 16 5.1 No 22 -1.7 No 0 0 No -22 0.78 Yes 48 34.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 55146587 + NM_001081637 LILRB1 1 0.6 0.39 21 7.77 82.32 19 5.57 Yes 44 0.92 Yes 0 0 No -18 0.58 No 52 69.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 55147004 + NM_001081637 LILRB1 1 0.4 0.46 26 4.49 83.11 21 3.85 No 58 -2.3 No 24 0.43 Yes -23 0.31 No 43 31.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 55147947 + NM_001081637 LILRB1 1 0.3 0.14 9 8.63 86.37 35 6.24 Yes 22 0.06 No 31 0.8 Yes -34 0.55 No 36 57.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 55147947 + NM_001081637 LILRB1 1 135.26 61.49 72 8.63 86.37 35 6.24 Yes 22 0.06 No 31 0.8 Yes -34 0.55 No 36 57.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 50571780 - NM_016357 LIMA1 1 0.09 0.15 9 4.7 78.52 27 6.16 Yes 14 0.86 Yes 0 0 No -26 0.74 Yes 44 77.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50571848 - NM_016357 LIMA1 1 0.09 0.15 9 0.37 0 35 6.19 Yes 22 1.23 Yes 0 0 No -34 0.74 Yes 36 84.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50575818 - NM_016357 LIMA1 1 1.44 1.89 59 3.93 78.98 28 5.74 Yes 35 2.12 Yes 24 0.85 Yes -27 0.8 Yes 43 88.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50586348 - NM_016357 LIMA1 1 15.63 22.61 72 1.76 76.3 26 5.94 Yes 13 0.49 No 26 0.55 Yes -26 0.79 Yes 44 81.97 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50607019 - NM_016357 LIMA1 1 0.9 1.6 49 10.92 84.49 18 5.61 Yes 5 1.34 Yes 0 0 No -27 0.88 Yes 43 92.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45650894 + NM_014240 LIMD1 1 0.25 0.25 13 11.13 89.4 33 6.54 Yes 20 1.22 Yes 0 0 No -35 0.92 Yes 35 92.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45654383 + NM_014240 LIMD1 1 2.63 2.43 66 8.65 78.18 26 5.48 No 13 1.09 Yes 25 0.93 Yes -25 0.86 Yes 45 96.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 45659061 + NM_014240 LIMD1 1 0.22 0.14 8 7.95 84.7 27 5.97 Yes 37 -0.95 No 0 0 No -26 0.58 No 44 82.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 45659064 + NM_014240 LIMD1 1 0.27 0.24 13 8.2 80.82 30 6.19 Yes 40 -0.94 No 0 0 No -29 0.57 No 41 79.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 45676448 + NM_014240 LIMD1 1 0.17 0.14 10 9.01 98.63 17 5.79 Yes 63 -3.13 No 29 0.5 Yes -29 0.71 Yes 41 67.65 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 45698876 + NM_014240 LIMD1 1 0.22 0.18 11 6.11 87.2 22 5.72 Yes 9 0.02 No 0 0 No -25 0.73 Yes 45 72.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 45713254 + NM_014240 LIMD1 1 0.1 0.15 11 0.13 60.72 22 5.03 No 51 0.59 No 0 0 No -22 0.47 No 65 23.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 45715593 + NM_014240 LIMD1 1 0.26 0.31 16 2.92 0 19 3.24 No 7 -2.7 No 0 0 No -18 0.55 No 44 50.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 61776179 - NM_030576 LIMD2 1 0.86 4.54 72 1.77 71.01 31 6.36 Yes 18 0.01 No 30 0.88 Yes -30 0.91 Yes 40 93.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 61776278 - NM_030576 LIMD2 1 0.04 0.18 12 3.7 73.46 16 4.69 No 23 0.33 No 0 0 No -35 0.49 No 55 23.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 61776291 - NM_030576 LIMD2 1 0.43 2.21 58 -0.86 0 18 3.72 No 10 0.37 No 0 0 No -22 0.49 No 48 71.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 61776311 - NM_030576 LIMD2 1 0.05 0.24 17 -13.19 0 22 4.58 No 26 -2.61 No 23 0.49 Yes -22 0.36 No 43 31.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 61776474 - NM_030576 LIMD2 1 0.31 1.63 52 1.17 0 15 4.47 No 62 -0.53 No 21 0.84 Yes -21 0.72 Yes 49 73.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 61776702 - NM_030576 LIMD2 1 0.14 0.35 20 -2.9 0 17 3.56 No 9 1.77 Yes 0 0 No -25 0.57 No 45 53.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 61776756 - NM_030576 LIMD2 1 4.74 10.92 72 6.52 84.7 20 5.1 No 7 0.05 No 19 0.43 Yes -19 0.47 No 51 67.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 62368206 + NM_017806 LIME1 1 0.46 0.4 14 6.91 79.15 17 5.24 No -3 1.95 Yes 0 0 No -23 0.68 Yes 47 64.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 62369360 + NM_017806 LIME1 1 81.59 39.67 72 5.95 82.83 27 5.74 Yes 14 0.62 No 0 0 No -26 0.82 Yes 44 76.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62369364 + NM_017806 LIME1 1 0.34 0.15 10 -1.6 0 31 6.07 Yes 18 0.61 No 0 0 No -30 0.85 Yes 40 46.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 62369636 + NM_017806 LIME1 1 1.16 1.1 49 8.81 87.1 15 5.21 No 27 -0.41 No 0 0 No -25 0.8 Yes 45 75.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62369970 + NM_017806 LIME1 1 0.61 0.74 34 5.11 86.44 23 5.39 No 39 2.35 Yes 0 0 No -51 0.4 No 19 76.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 73521342 + NM_001204426 LIMK1 1 0.11 0.13 7 -8.23 69.97 46 8.21 Yes NA NA NA 0 0 No -28 0.62 No 42 59.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 73521400 + NM_001204426 LIMK1 1 0.12 0.13 8 6.17 76.44 23 7 Yes 10 1.18 Yes 22 0.97 Yes -22 0.97 Yes 48 94.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 73525982 + NM_001204426 LIMK1 1 0.15 0.26 16 2.13 0 33 6.84 Yes 58 1.07 Yes 0 0 No -32 0.49 No 44 57.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 31644370 + NM_005569 LIMK2 1 0.21 0.13 7 2.49 77.59 22 4.8 No 14 1.09 Yes 19 0.89 Yes -21 0.88 Yes 49 48 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 31644370 + NM_005569 LIMK2 1 2.17 1.18 46 2.49 77.59 22 4.8 No 14 1.09 Yes 19 0.89 Yes -21 0.88 Yes 49 48 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 31654284 + NM_005569 LIMK2 1 0.23 0.14 8 0.61 0 11 4.12 No 75 -2.89 No 0 0 No -29 0.86 Yes 41 83.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 31667097 + NM_005569 LIMK2 1 0.54 0.4 22 5.07 73.56 18 5.2 No 73 -4.55 No 20 0.8 Yes -22 0.51 No 49 59.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 31668830 + NM_005569 LIMK2 1 2.12 1.22 51 8.6 94.66 22 5.29 No 9 0.25 No 21 0.85 Yes -21 0.86 Yes 49 86.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 31669442 + NM_005569 LIMK2 1 0.28 0.18 13 -3.91 0 33 6.03 Yes 20 0.45 No 0 0 No -33 0.69 Yes 37 84.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 31671148 + NM_005569 LIMK2 1 0.26 0.22 14 1.93 0 22 4.58 No 24 0.48 No 0 0 No -36 0.34 No 34 66.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 31672774 + NM_005569 LIMK2 1 9.56 4.29 71 7.17 83.6 23 4.15 No NA NA NA 23 0.57 Yes -19 0.59 No 51 33.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 109287497 + NM_001193485 LIMS1 1 0.32 0.1 7 2.59 67.51 33 7.12 Yes 69 -2.8 No 0 0 No -17 0.77 Yes 53 52.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 109297424 + NM_001193485 LIMS1 1 0.06 0.1 7 6.03 79.23 47 7.98 Yes 34 1.86 Yes 24 0.47 Yes -46 0.83 Yes 24 89.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36242951 + NM_019104 LIN37 1 0.72 0.15 11 8.86 90.44 35 6 Yes 22 0.12 No 29 0.66 Yes -29 0.81 Yes 41 73.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 74552070 + NM_001024674 LIN52 1 0.69 0.22 14 1.25 68.53 35 6 Yes 22 0.62 No 0 0 No -34 0.96 Yes 36 97.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 74552127 + NM_001024674 LIN52 1 1.87 0.63 30 5.26 76.46 42 6.1 Yes 49 0.34 No 0 0 No -24 0.53 No 46 57.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74552195 + NM_001024674 LIN52 1 0.44 0.13 7 10.45 83.81 22 6.08 Yes 44 2.08 Yes 33 0.22 Yes -24 0.75 Yes 46 80.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 74552562 + NM_001024674 LIN52 1 0.42 0.14 9 7.21 81.36 24 4.9 No 58 0.79 Yes 0 0 No -23 0.9 Yes 47 75.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74557940 + NM_001024674 LIN52 1 5.29 1.74 54 0.5 0 9 3.87 No 38 1.51 Yes 20 0.68 Yes -50 0.42 No 20 57.62 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 74562632 + NM_001024674 LIN52 1 1.69 1.07 42 -1.7 58 29 5.73 Yes 16 0.52 No 28 0.8 Yes -15 0.32 No 42 44.45 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 74569047 + NM_001024674 LIN52 1 0.48 0.25 13 3.93 74.27 45 5.06 No 32 1.13 Yes 0 0 No -34 0.61 No 36 79.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 74572304 + NM_001024674 LIN52 1 1.31 0.69 35 12.72 94.03 33 5.74 Yes 66 0.49 No 0 0 No -27 0.52 No 43 67.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74578189 + NM_001024674 LIN52 1 0.37 0.21 12 8.5 87.72 37 5.47 No 24 2.43 Yes 0 0 No -32 0.55 No 34 74.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 74580708 + NM_001024674 LIN52 1 9.13 4.79 72 4.49 0 57 8.25 Yes 44 1.66 Yes 28 0.02 Yes -51 0.61 No 19 83.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 74584708 + NM_001024674 LIN52 1 0.31 0.19 12 7.42 80.34 13 5.4 No 0 0.93 Yes 0 0 No -33 0.51 No 37 57.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 74586558 + NM_001024674 LIN52 1 0.71 0.39 19 12.12 88.27 32 7.78 Yes 19 0.47 No 0 0 No -26 0.69 Yes 44 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 74592441 + NM_001024674 LIN52 1 0.51 0.25 14 7.7 85.1 22 4.93 No 1 0.51 No 0 0 No -21 0.62 No 49 62.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74594796 + NM_001024674 LIN52 1 0.64 0.33 18 5.34 81.31 46 6.93 Yes 46 1.21 Yes 0 0 No -31 0.59 No 39 52.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 74649821 + NM_001024674 LIN52 1 0.42 0.21 14 10.62 88.27 39 6.55 Yes 38 1.27 Yes 0 0 No -38 0.83 Yes 32 87.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74665588 + NM_001024674 LIN52 1 0.45 0.25 16 11.32 88.06 33 7.82 Yes 8 0.73 No 0 0 No -32 0.39 No 33 36.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74665628 + NM_001024674 LIN52 1 0.45 0.25 16 1.36 0 31 6.92 Yes 18 1.01 Yes 0 0 No -30 0.67 Yes 36 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 83849393 - NM_194282 LIN54 1 0.21 0.17 10 6.08 86.2 30 5.51 No 5 0.76 No 23 0.21 Yes -22 0.56 No 48 68.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 83859652 - NM_194282 LIN54 1 0.28 0.19 11 -1.22 0 15 3.87 No 49 1.14 Yes 0 0 No -29 0.81 Yes 41 67.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 83864380 - NM_194282 LIN54 1 0.46 0.21 10 4.69 80.73 22 4.82 No 44 -3.55 No 0 0 No -21 0.73 Yes 49 52.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 83882630 - NM_194282 LIN54 1 0.52 0.39 21 6.36 71.94 43 5.95 Yes 37 0.34 No 0 0 No -34 0.72 Yes 36 81.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 83891619 - NM_194282 LIN54 1 0.74 0.47 30 1.14 0 27 6.55 Yes 14 1.24 Yes 22 0.81 Yes -26 0.73 Yes 44 88.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 83896864 - NM_194282 LIN54 1 0.15 0.11 8 9.91 87.82 25 5.2 No 39 1.11 Yes 0 0 No -24 0.94 Yes 46 91.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 83902629 - NM_194282 LIN54 1 0.2 0.11 7 12.24 89.43 25 6.24 Yes 12 0.33 No 0 0 No -27 0.8 Yes 43 77.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 27528003 - NM_018362 LIN7C 1 5.68 3.9 67 8.15 81.54 24 6.32 Yes 63 1.43 Yes 0 0 No -23 0.74 Yes 47 79.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 27528040 - NM_018362 LIN7C 1 0.53 0.31 18 3.43 69.23 39 6.23 Yes 26 1.45 Yes 0 0 No -38 0.85 Yes 32 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 226426322 - NM_173083 LIN9 1 0.42 0.15 11 2.4 0 25 5.39 No 36 0.85 Yes 0 0 No -24 0.6 No 22 70.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 226434068 - NM_173083 LIN9 1 0.72 0.29 15 4.69 82.6 20 4.9 No 7 0.53 No 0 0 No -19 0.88 Yes 51 82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226435905 - NM_173083 LIN9 1 3.41 1.36 51 7.05 85.75 40 6.37 Yes 27 0.67 No 0 0 No -35 0.81 Yes 35 82.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226448725 - NM_173083 LIN9 1 0.36 0.13 7 8.26 85.32 21 8.09 Yes 8 1.16 Yes 0 0 No -20 0.63 No 50 49.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 226465608 - NM_173083 LIN9 1 0.3 0.11 7 -4.37 0 34 5.92 Yes 25 0.24 No 0 0 No -33 0.82 Yes 37 86.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226465612 - NM_173083 LIN9 1 0.29 0.13 8 1.95 80.87 30 5.57 Yes 21 0.26 No 0 0 No -29 0.88 Yes 41 84.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226467592 - NM_173083 LIN9 1 0.48 0.18 11 8 90.48 23 5.85 Yes 10 0.06 No 0 0 No -22 0.59 No 48 56.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 226485512 - NM_173083 LIN9 1 1.41 0.46 24 -0.23 75.29 18 5.57 Yes 5 0.98 Yes 0 0 No -27 0.68 Yes 43 75.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 226486593 - NM_173083 LIN9 1 0.81 0.26 16 -2.06 86.77 34 4.87 No 12 1.75 Yes 0 0 No -24 0.63 No 46 62.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 226486597 - NM_173083 LIN9 1 0.4 0.13 7 2.02 0 30 4.66 No 8 1.79 Yes 0 0 No -20 0.56 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 130687080 - NR_109854 LINC-PINT 1 13 2.07 52 11.15 88.27 36 4.68 No 20 0.8 Yes 35 0.56 Yes -31 0.44 No 43 60.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 130694538 - NR_109854 LINC-PINT 1 2.15 0.39 19 4.26 75.83 31 6.75 Yes 18 1.04 Yes 0 0 No -30 0.91 Yes 40 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136891097 + NR_015427 LINC00094 1 0.75 0.18 10 8.71 85.65 27 5.65 Yes 50 0.74 No 0 0 No -26 0.77 Yes 44 59.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 136891332 + NR_015427 LINC00094 1 3.39 0.93 46 4.76 84.69 27 5.57 Yes 14 1.43 Yes 0 0 No -26 0.83 Yes 44 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136893947 + NR_015427 LINC00094 1 0.99 0.28 18 11.08 89.1 37 7.35 Yes 24 1.24 Yes 36 0.86 Yes -36 0.67 Yes 34 75.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 26758649 - NR_024027 LINC00158 1 0.05 0.11 7 -8.04 75.84 23 5.63 Yes 10 1.34 Yes 0 0 No -22 0.6 No 47 41.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 26758673 - NR_024027 LINC00158 1 0.06 0.13 7 1.96 62.08 22 4.51 No 60 -5.22 No 23 0.32 Yes -29 0.78 Yes 41 68.7 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr21 26759073 - NR_024027 LINC00158 1 2.1 2.49 12 11.25 94.16 30 5.66 Yes 53 0.69 No 0 0 No -29 0.59 No 41 73.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 26761390 - NR_024027 LINC00158 1 0.16 0.29 19 -0.34 0 94 9.54 Yes 7 -1.21 No 0 0 No -12 0.3 No 23 24.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 26761395 - NR_024027 LINC00158 1 3.79 6.1 67 9.51 86.33 89 9.29 Yes 76 1.17 Yes 0 0 No -42 0.16 No 28 31.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 26768997 - NR_024027 LINC00158 1 2.07 3.22 62 6.88 86.11 23 3.85 No 1 0.38 No 23 0.66 Yes -23 0.88 Yes 47 90.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 26771651 - NR_024027 LINC00158 1 0.56 0.9 37 12.13 88.71 22 5.66 Yes 9 1.08 Yes 0 0 No -21 0.62 No 43 72.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 26773540 - NR_024027 LINC00158 1 6.4 9.28 71 5.94 81.65 24 6.24 Yes 11 1.63 Yes 0 0 No -23 0.82 Yes 47 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 26784806 - NR_024027 LINC00158 1 0.23 0.33 22 8.76 88.54 23 6.19 Yes 43 1.74 Yes 0 0 No -22 0.33 No 48 38.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 26793978 - NR_024027 LINC00158 1 0.13 0.31 16 4.06 90.75 19 4.86 No 71 1.03 Yes 0 0 No -17 0.63 No 52 74.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 39781648 + NR_026999 LINC00265 1 7.94 0.97 41 2.96 63.03 40 6.88 Yes 27 1.34 Yes 0 0 No -39 0.63 No 31 58.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 39781709 + NR_026999 LINC00265 1 0.99 0.13 7 5.46 92.69 19 4.8 No 6 0.41 No 0 0 No -18 0.62 No 52 54.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 39798855 + NR_026999 LINC00265 1 1.68 0.19 13 12.64 84.28 31 6.05 Yes 44 1.72 Yes 0 0 No -35 0.49 No 35 59.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 39803146 + NR_026999 LINC00265 1 85.55 9.31 72 9.95 89.84 31 6.08 Yes 18 0.66 No 0 0 No -30 0.93 Yes 40 92.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 39811842 + NR_026999 LINC00265 1 0.61 0.13 8 6.69 80.76 23 7.41 Yes 10 1.25 Yes 0 0 No -22 0.87 Yes 48 89.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 39819030 + NR_026999 LINC00265 1 2.42 0.28 14 8.84 87.15 35 5.28 No 16 1.02 Yes 0 0 No -28 0.79 Yes 42 81.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 39820105 + NR_026999 LINC00265 1 2.34 0.22 13 3.69 0 32 6.93 Yes 19 1.76 Yes 0 0 No -31 0.93 Yes 39 95.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 39820105 + NR_026999 LINC00265 1 3.26 0.29 17 3.69 0 32 6.93 Yes 19 1.76 Yes 0 0 No -31 0.93 Yes 39 95.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 39821368 + NR_026999 LINC00265 1 34.31 3.32 70 0.78 0 24 5.39 No 52 0.4 No 0 0 No -23 0.35 No 18 29.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 39830766 + NR_026999 LINC00265 1 1.48 0.22 13 4.51 84.85 31 5.96 Yes 29 1.23 Yes 0 0 No -30 0.49 No 41 60.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 96479706 - NR_103734 LINC00342 1 4.96 0.4 23 10 92.07 28 5.82 Yes 15 0.84 Yes 27 0.87 Yes -27 0.89 Yes 43 89.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 30944663 - NR_024464 LINC00426 1 51.1 2.83 64 8.93 89.66 21 6.06 Yes 8 1.08 Yes 20 0.81 Yes -20 0.9 Yes 50 92.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 211557783 + NR_026761 LINC00467 1 2.49 0.97 42 6.53 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.83 Yes 51 92.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211568293 + NR_026761 LINC00467 1 7.8 4.1 65 7.01 87.01 29 5.83 Yes 2 1.28 Yes 0 0 No -31 0.65 No 39 68.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 211571377 + NR_026761 LINC00467 1 34.03 9.65 72 1.99 0 49 5.71 Yes 50 1.9 Yes 0 0 No -25 0.41 No 32 48.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 211572718 + NR_026761 LINC00467 1 4.66 1.26 43 5.98 82.65 25 5.54 No 20 0.26 No 0 0 No -27 0.6 No 16 50.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 211595880 + NR_026761 LINC00467 1 0.47 0.17 12 6.93 91.4 22 5.82 Yes 44 0.23 No 0 0 No -21 0.74 Yes 49 78.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 18549279 + NR_015432 LINC00493 1 0.3 0.28 17 7.48 84.53 56 6.91 Yes 43 1.73 Yes 43 0.65 Yes -43 0.85 Yes 27 94.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 18549882 + NR_015432 LINC00493 1 194.94 191.31 72 -2.43 58.04 47 5.36 No 53 1.32 Yes 39 0.61 Yes -46 0.58 No 24 73.38 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr18 5240182 + NR_015389 LINC00667 1 3.88 0.33 17 0.87 83.95 25 5.2 No 67 1.06 Yes 27 0.93 Yes -24 0.97 Yes 46 97.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 5240185 + NR_015389 LINC00667 1 25.87 1.83 52 4.87 87.56 28 5.48 No 70 1.06 Yes 27 0.93 Yes -27 0.97 Yes 43 97.44 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 5240541 + NR_015389 LINC00667 1 3.73 0.36 22 3.62 80.89 27 5.29 No 61 0.62 No 0 0 No -26 0.59 No 44 51.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 5240646 + NR_015389 LINC00667 1 80.38 6.18 72 11.64 95.65 19 5.27 No 6 0.64 No 29 0.72 Yes -30 0.57 No 40 60.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 66121698 + NR_027418 LINC00674 1 2.22 0.18 11 2.25 59.96 26 6.24 Yes 76 -3.1 No 0 0 No -28 0.59 No 42 62.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 58279322 - NR_132997 LINC00680-GUSBP4 1 5.04 0.51 27 11.49 85.86 30 5.53 No 17 0.62 No 0 0 No -29 0.96 Yes 41 98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89110486 + NR_135292 LINC00863 1 23.76 1.51 53 8.95 78.84 24 5.7 Yes -1 1.73 Yes 0 0 No -27 0.66 No 43 65.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 150132117 + NR_034033 LINC00996 1 477.19 29.89 72 11.47 86.05 30 5.83 Yes 17 1.11 Yes 29 0.85 Yes -27 0.59 No 41 76.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 150132286 + NR_034033 LINC00996 1 124.42 7.36 68 6.21 84.06 17 5.99 Yes 4 1.14 Yes 0 0 No -36 0.6 No 53 44.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 112757653 - NR_015442 LINC00998 1 0.04 0.11 7 -2.95 0 19 4.35 No 32 0.97 Yes 0 0 No -44 0.77 Yes 26 90.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38733472 + NR_024497 LINC00999 1 7.92 1.19 43 11.26 92.09 32 7.79 Yes 19 0.68 No 0 0 No -27 0.63 No 43 67.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 128287976 + NR_024368 LINC01000 1 43.47 9.68 72 11.26 92.09 32 7.79 Yes 19 0.68 No 0 0 No -27 0.63 No 43 67.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 128290664 + NR_024368 LINC01000 1 0.43 0.18 11 1.4 78.08 9 4.91 No 29 1.24 Yes 0 0 No -30 0.49 No 41 60.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 128290667 + NR_024368 LINC01000 1 0.32 0.11 8 3.69 76.63 12 5.83 Yes 32 1.24 Yes 0 0 No -33 0.39 No 50 31.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 46255500 - NR_125786 LINC01055 1 2.29 1.17 48 5.91 83.28 31 5.98 Yes 3 0.54 No 0 0 No -30 0.52 No 31 63.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46255500 - NR_125786 LINC01055 1 0.86 0.39 20 5.91 83.28 31 5.98 Yes 3 0.54 No 0 0 No -30 0.52 No 31 63.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46261074 - NR_125786 LINC01055 1 0.2 0.11 8 6.67 83.82 19 5.48 No 6 1.12 Yes 0 0 No -18 0.71 Yes 52 85.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46267720 - NR_125786 LINC01055 1 0.44 0.26 12 8.2 82.29 19 4.8 No 44 1.41 Yes 0 0 No -23 0.84 Yes 47 78.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46267747 - NR_125786 LINC01055 1 0.3 0.19 11 5.76 87.4 30 7.52 Yes 17 1.43 Yes 0 0 No -24 0.64 No 46 72.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 46267750 - NR_125786 LINC01055 1 0.73 0.46 27 5.29 77.4 27 7.33 Yes 14 1.43 Yes 0 0 No -26 0.51 No 49 65.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 46269930 - NR_125786 LINC01055 1 0.2 0.13 7 -1.22 0 11 4.12 No 60 -3.96 No 0 0 No -23 0.79 Yes 47 95.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 46272259 - NR_125786 LINC01055 1 0.33 0.21 12 6.1 75.32 37 5.6 Yes 34 0.77 Yes 0 0 No -32 0.4 No 38 75.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 46272287 - NR_125786 LINC01055 1 0.41 0.15 10 6.4 82.51 19 5 No 57 1 Yes 0 0 No -28 0.74 Yes 42 81.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46274852 - NR_125786 LINC01055 1 0.17 0.11 8 3.72 81.59 17 5.2 No 43 1.09 Yes 0 0 No -55 0.89 Yes 15 31.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 46274870 - NR_125786 LINC01055 1 10.74 6.51 69 6.01 77.64 54 5.93 Yes 25 1.11 Yes 0 0 No -37 0.91 Yes 33 92.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 112144375 - NR_034126 LINC01160 1 17.83 1.71 53 0.43 68.02 40 5 No 47 -1.76 No 0 0 No -28 0.56 No 42 63.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 127357588 - NR_015360 LINC01184 1 1.9 0.57 32 4.88 77.42 45 6.63 Yes 32 1 Yes 0 0 No -36 0.44 No 36 67.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 127365657 - NR_015360 LINC01184 1 5.68 1.75 54 6.2 76.13 24 5.03 No 40 0.81 Yes 0 0 No -31 0.51 No 47 44.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 127395865 - NR_015360 LINC01184 1 1.16 0.24 10 -3.75 71.62 27 3.9 No 44 -2.64 No 0 0 No -26 0.63 No 44 70.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 127396337 - NR_015360 LINC01184 1 12.11 3.83 66 9.48 87.47 24 5.48 No 11 1.12 Yes 23 0.89 Yes -23 0.8 Yes 47 82.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 127412786 - NR_015360 LINC01184 1 5.79 0.42 24 12.13 95.02 25 5.57 Yes 12 0.73 No 24 0.74 Yes -24 0.5 No 50 59.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 127417884 - NR_015360 LINC01184 1 8.97 0.74 39 3.73 80.12 21 7.08 Yes 8 1.4 Yes 28 0.69 Yes -31 0.59 No 50 80.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 127417887 - NR_015360 LINC01184 1 6.05 0.53 26 5.2 85.02 18 6.88 Yes 5 1.42 Yes 28 0.69 Yes -28 0.78 Yes 42 73.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 243231024 - NR_029401 LINC01347 1 1.09 0.14 8 -6.46 0 59 7.91 Yes 3 1.23 Yes 0 0 No -27 0.43 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 243232837 - NR_029401 LINC01347 1 5.27 0.72 36 8.92 87.07 35 5.39 No 16 0.96 Yes 0 0 No -28 0.81 Yes 42 72.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 243240063 - NR_029401 LINC01347 1 5.74 0.47 22 7.39 87.08 23 7.42 Yes 10 1.31 Yes 0 0 No -22 0.89 Yes 48 91.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42042067 + NR_110724 LINC01480 1 0.11 0.1 7 -4.33 0 26 6.8 Yes 13 0.64 No 33 0.55 Yes -25 0.7 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 42042089 + NR_110724 LINC01480 1 41.28 30.74 72 3.71 70.93 17 4.44 No 35 0.62 No 33 0.55 Yes -47 0.4 No 53 36.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 42042959 + NR_110724 LINC01480 1 0.25 0.1 7 -1.22 66.25 53 7.92 Yes 8 -0.83 No 20 0.67 Yes -20 0.47 No 50 54.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 42042904 + NR_110724 LINC01480 1 42.29 13.14 72 4.05 75.6 47 6.1 Yes 10 0.33 No 0 0 No -22 0.83 Yes 48 91.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 42042959 + NR_110724 LINC01480 1 198 80.99 72 -1.22 66.25 53 7.92 Yes 8 -0.83 No 20 0.67 Yes -20 0.47 No 50 54.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 37176873 - NR_110708 LINC01534 1 2.63 0.21 12 2.41 72.34 26 5.48 No 13 0.28 No 0 0 No -25 0.87 Yes 45 79.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 72513690 - NR_126330 LINC01572 1 18.85 1.63 45 7.47 87.64 28 6.24 Yes 15 1.22 Yes 27 0.83 Yes -27 0.85 Yes 43 89.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 72513690 - NR_126330 LINC01572 1 7.41 0.6 35 7.47 87.64 28 6.24 Yes 15 1.22 Yes 27 0.83 Yes -27 0.85 Yes 43 89.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 72525866 - NR_126330 LINC01572 1 5.88 0.49 25 4.65 80.18 22 5.02 No 35 0.54 No 31 0.6 Yes -31 0.43 No 39 54.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 72539431 - NR_126330 LINC01572 1 2.81 0.14 10 9.46 86.87 27 7.61 Yes 67 -2.35 No 0 0 No -26 0.91 Yes 44 89.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 72557310 - NR_126330 LINC01572 1 3.52 0.56 31 -5.34 0 41 7.59 Yes 28 1.13 Yes 0 0 No -41 0.69 Yes 29 81.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 72651134 - NR_126330 LINC01572 1 5.9 0.32 15 0.65 79.94 26 5.48 No 13 0.91 Yes 25 0.79 Yes -25 0.66 No 45 58.89 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 72651137 - NR_126330 LINC01572 1 4.46 0.24 13 5.79 80.14 23 5.27 No 10 0.91 Yes 25 0.79 Yes -22 0.62 No 48 55.53 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 72651453 - NR_126330 LINC01572 1 3.1 0.24 14 3.96 68.8 29 5.02 No 68 -5.86 No 23 0.84 Yes -23 0.79 Yes 47 82.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 93426814 + NR_037600 LINC01578 1 32.75 15.75 72 4.66 82.04 29 4.15 No 26 0.4 No 0 0 No -22 0.9 Yes 48 90.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 93429374 + NR_037600 LINC01578 1 0.07 0.17 11 0.21 0 58 5.52 No 27 0.42 No 26 0.76 Yes -33 0.48 No 31 70.52 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 93431414 + NR_037600 LINC01578 1 0.18 0.42 23 0.77 80.37 27 8.51 Yes 14 0.82 Yes 0 0 No -26 0.67 Yes 44 78.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 162102371 + NR_110163 LINC01806 1 1.04 0.25 14 2.24 79.26 26 5.41 No 19 1.34 Yes 0 0 No -31 0.4 No 39 47.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 162103281 + NR_110163 LINC01806 1 4.61 0.76 37 10.79 88.62 17 6.15 Yes 4 0.75 No 0 0 No -17 0.41 No 46 39.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 101110866 - NM_001040616 LINS1 1 5.97 1.89 58 9.2 85.23 28 7.43 Yes 15 0.83 Yes 19 0.57 Yes -27 0.55 No 36 58.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 101112163 - NM_001040616 LINS1 1 10.36 0.67 35 5.96 74.71 61 7.79 Yes 64 1.6 Yes 0 0 No -25 0.51 No 34 37.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 101112215 - NM_001040616 LINS1 1 32.14 2.13 61 1.87 0 16 4.42 No 12 1.51 Yes 0 0 No -24 0.57 No 46 84.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 101112227 - NM_001040616 LINS1 1 46.48 2.88 66 2.9 74.51 13 4.87 No 0 1.18 Yes 0 0 No -20 0.64 No 43 57.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 101113506 - NM_001040616 LINS1 1 177.75 11.51 72 8.32 78.16 32 7.42 Yes 19 1.26 Yes 31 0.82 Yes -37 0.57 No 33 75.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 101114376 - NM_001040616 LINS1 1 0.73 0.39 18 5.12 86.56 30 4.86 No 39 1.18 Yes 0 0 No -29 0.63 No 41 58.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 101116908 - NM_001040616 LINS1 1 4.99 1.49 50 8.85 88.97 32 7.25 Yes 19 1.13 Yes 31 0.74 Yes -31 0.88 Yes 39 84.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 101116908 - NM_001040616 LINS1 1 0.54 0.14 9 8.85 88.97 32 7.25 Yes 19 1.13 Yes 31 0.74 Yes -31 0.88 Yes 39 84.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 101126538 - NM_001040616 LINS1 1 5.56 1.22 45 10.99 88.15 21 5.77 Yes 8 1.15 Yes 29 0.83 Yes -29 0.65 No 41 74.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 90986783 - NM_001127605 LIPA 1 0.05 0.14 9 0.6 70.74 42 6.93 Yes 29 0.46 No 25 0.62 Yes -41 0.88 Yes 29 95.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 90991789 - NM_001127605 LIPA 1 0.11 0.19 11 5.94 86.6 23 5.62 Yes 10 0.55 No 0 0 No -25 0.5 No 45 86.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 90996409 - NM_001127605 LIPA 1 0.3 0.57 30 10.84 91.96 43 6.63 Yes 18 0.49 No 0 0 No -30 0.94 Yes 40 97.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 91003499 - NM_001127605 LIPA 1 0.13 0.21 14 7.38 84.53 35 6.46 Yes 22 0.26 No 0 0 No -34 0.78 Yes 36 82.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 42912633 - NM_005357 LIPE 1 0.69 0.15 11 -0.43 0 11 4.12 No 17 1.61 Yes 0 0 No -37 0.68 Yes 33 70.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 185229505 - NM_139248 LIPH 1 0.4 0.18 7 6.23 85.89 27 5.16 No 43 0.4 No 21 0.63 Yes -26 0.95 Yes 44 96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 185246277 - NM_139248 LIPH 1 1.61 0.36 21 11.97 90.92 28 3.88 No 64 0.97 Yes 0 0 No -22 0.44 No 46 41.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 185262594 - NM_139248 LIPH 1 2.32 0.61 24 4.44 74.9 13 4.91 No 0 1.1 Yes 0 0 No -22 0.46 No 37 40.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 185264761 - NM_139248 LIPH 1 1.55 0.39 21 12.03 93.17 23 7.28 Yes 10 1.01 Yes 25 0.46 Yes -23 0.5 No 47 52.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 11645661 - NM_004862 LITAF 1 0.65 2.57 63 4.73 87.63 21 5.09 No 8 1.13 Yes 26 0.82 Yes -20 0.79 Yes 50 82.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 11647535 - NM_004862 LITAF 1 0.02 0.14 8 2.78 0 17 4.43 No 33 1.1 Yes 0 0 No -45 0.5 No 25 83.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 18141775 + NM_004140 LLGL1 1 11.13 1.22 48 1.53 0 15 3.87 No 72 -2.67 No 0 0 No -25 0.88 Yes 45 55.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 18144956 + NM_004140 LLGL1 1 0.97 0.13 8 6.89 77.74 39 7.84 Yes 26 1.49 Yes 0 0 No -38 0.85 Yes 32 84.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 18145485 + NM_004140 LLGL1 1 3.15 0.57 27 1.58 0 10 3.87 No 37 0.51 No 0 0 No -24 0.5 No 46 65.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 18145761 + NM_004140 LLGL1 1 0.84 0.14 9 10.23 79.79 34 7.5 Yes 37 1.25 Yes 0 0 No -33 0.8 Yes 37 94.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 56998385 - NM_005570 LMAN1 1 0.04 0.22 14 -0.59 0 22 4.58 No 49 0.89 Yes 25 0.88 Yes -21 0.76 Yes 49 64.24 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 56998787 - NM_005570 LMAN1 1 0.21 0.94 39 -6.75 0 51 6.22 Yes 2 0.75 No 23 0.84 Yes -50 0.67 Yes 20 53.3 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr18 57000476 - NM_005570 LMAN1 1 0.07 0.28 18 -14.19 0 21 4.87 No 21 0.47 No 0 0 No -23 0.79 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 57000491 - NM_005570 LMAN1 1 0.09 0.4 21 -6.85 70.44 19 4.51 No 6 0.46 No 22 0.65 Yes -24 0.86 Yes 46 81.36 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 57000493 - NM_005570 LMAN1 1 0.08 0.33 16 -0.6 78.33 17 4.35 No 4 0.44 No 22 0.65 Yes -22 0.86 Yes 48 80.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 57005887 - NM_005570 LMAN1 1 0.04 0.17 11 -0.35 75.18 21 5 No 59 0.54 No 29 0.88 Yes -20 0.95 Yes 50 97.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 57014769 - NM_005570 LMAN1 1 0.06 0.26 15 9.68 87.67 33 6.22 Yes -3 1.75 Yes 0 0 No -32 0.64 No 38 71.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 57018720 - NM_005570 LMAN1 1 0.05 0.21 11 -1.08 0 12 4.24 No 51 1.01 Yes 0 0 No -58 0.36 No 48 57.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 57018744 - NM_005570 LMAN1 1 0.02 0.1 7 -15.96 64.26 40 7.01 Yes 27 1.02 Yes 0 0 No -34 0.42 No 35 54.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 57021031 - NM_005570 LMAN1 1 0.5 2.44 64 5.54 89.01 20 5.1 No 29 -3.92 No 0 0 No -19 0.72 Yes 46 79.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 57021812 - NM_005570 LMAN1 1 0.03 0.15 11 -8.71 0 23 4.74 No 68 0.34 No 0 0 No -22 0.48 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 57022917 - NM_005570 LMAN1 1 0.29 0.99 40 3.16 69.73 33 5.45 No 13 0.46 No 30 0.79 Yes -25 0.66 Yes 45 48.25 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr18 57023370 - NM_005570 LMAN1 1 0.22 0.76 38 10.25 94 24 4.79 No 15 0.58 No 0 0 No -23 0.78 Yes 47 68.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 176758934 - NM_006816 LMAN2 1 0.03 0.11 7 4.73 84.83 37 5.05 No 54 1.19 Yes 0 0 No -22 0.59 No 48 45.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176759271 - NM_006816 LMAN2 1 3.29 10.14 72 7.05 81.32 27 6.48 Yes 14 1.64 Yes 26 0.86 Yes -26 0.89 Yes 44 92.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176761379 - NM_006816 LMAN2 1 0.06 0.29 18 3.41 74.69 18 5.59 Yes 5 0.66 No 29 0.75 Yes -20 0.63 No 20 69.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 176764467 - NM_006816 LMAN2 1 0.07 0.4 21 5.9 76.71 36 7.8 Yes 66 1.51 Yes 29 0.67 Yes -35 0.5 No 41 49.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 176764766 - NM_006816 LMAN2 1 0.06 0.43 22 -6.44 0 29 5.48 No 32 0.53 No 31 0.43 Yes -44 0.53 No 26 46.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 176764771 - NM_006816 LMAN2 1 0.02 0.11 8 -0.41 70.27 24 5 No 27 0.54 No 31 0.43 Yes -26 0.61 No 44 65.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 176764845 - NM_006816 LMAN2 1 0.07 0.46 24 9.27 86.49 60 7.65 Yes 68 0.61 No 0 0 No -24 0.81 Yes 46 89.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 176765628 - NM_006816 LMAN2 1 0.04 0.21 14 -4 0 19 4.36 No 76 -2.59 No 0 0 No -24 0.39 No 58 39.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 176769340 - NM_006816 LMAN2 1 0.07 0.42 23 7.11 87.82 35 5.9 Yes 22 1.47 Yes 0 0 No -20 0.75 Yes 50 64.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 176771045 - NM_006816 LMAN2 1 0.03 0.18 12 9.1 85.67 27 7.62 Yes 14 1.46 Yes 0 0 No -26 0.95 Yes 44 95.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 156483133 - NM_022458 LMBR1 1 0.12 0.15 10 5.38 71.71 36 7.14 Yes 23 1.69 Yes 0 0 No -28 0.69 Yes 42 68.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 156514920 - NM_022458 LMBR1 1 0.1 0.13 8 7.53 79.59 26 5.66 Yes 22 1.53 Yes 0 0 No -25 0.82 Yes 45 72.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 156515761 - NM_022458 LMBR1 1 0.09 0.11 7 11.45 90.3 33 6.04 Yes 20 0.93 Yes 0 0 No -33 0.58 No 38 58.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 156516279 - NM_022458 LMBR1 1 0.16 0.21 10 9.51 89.81 28 6.71 Yes 15 0.73 No 0 0 No -27 0.94 Yes 43 89.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 156518184 - NM_022458 LMBR1 1 0.13 0.17 7 6.15 72.7 41 6.43 Yes 28 1.05 Yes 0 0 No -29 0.76 Yes 30 81.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 156529310 - NM_022458 LMBR1 1 0.11 0.11 7 5.82 78.07 28 5.83 Yes -1 0.7 No 27 0.83 Yes -27 0.94 Yes 43 92.64 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 156554857 - NM_022458 LMBR1 1 0.09 0.13 7 7.78 81.27 27 5.74 Yes 39 1.07 Yes 0 0 No -29 0.75 Yes 41 73.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 156572427 - NM_022458 LMBR1 1 10.08 11.14 72 8.18 90.92 25 5.47 No 72 0.18 No 24 0.51 Yes -27 0.76 Yes 43 62.93 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 156591719 - NM_022458 LMBR1 1 0.2 0.28 16 6.8 80.12 30 6.4 Yes 17 1.39 Yes 0 0 No -29 0.91 Yes 41 94.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 156593718 - NM_022458 LMBR1 1 0.43 0.64 33 3.88 72.96 34 6.27 Yes 21 1.22 Yes 0 0 No -33 0.62 No 37 79.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 156616278 - NM_022458 LMBR1 1 0.22 0.31 17 8.84 90.5 25 5.92 Yes 12 1.5 Yes 0 0 No -24 0.9 Yes 46 89.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 156619472 - NM_022458 LMBR1 1 0.14 0.18 12 11.23 89.76 49 6.05 Yes 13 1.21 Yes 23 0.83 Yes -28 0.73 Yes 45 60.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 156623002 - NM_022458 LMBR1 1 0.19 0.24 10 3.39 78.22 24 7.59 Yes 11 1.44 Yes 0 0 No -23 0.81 Yes 47 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 156627270 - NM_022458 LMBR1 1 2.76 3 68 10.82 83.73 27 5.39 No 53 0.17 No 26 0.83 Yes -26 0.63 No 44 65.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 156627290 - NM_022458 LMBR1 1 0.72 0.81 37 2.78 0 33 12.13 Yes 33 0.15 No 32 0.67 Yes -32 0.65 No 38 52.73 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 49491805 - NM_001300750 LMBR1L 1 0.89 0.29 14 5.02 75.43 80 9.16 Yes 67 -2.11 No 0 0 No -22 0.88 Yes 48 87.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49494997 - NM_001300750 LMBR1L 1 0.72 0.17 11 6.24 84.98 42 6.87 Yes 29 1.16 Yes 24 0.52 Yes -41 0.9 Yes 29 84.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49495047 - NM_001300750 LMBR1L 1 15.08 3.43 67 7.64 80.87 30 5.88 Yes 73 0.95 Yes 30 0.41 Yes -30 0.73 Yes 40 65.92 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 49500846 - NM_001300750 LMBR1L 1 0.37 0.13 9 0.88 84.55 18 4.69 No 11 0.53 No 23 0.84 Yes -23 0.56 No 47 57.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 70410695 - NM_018368 LMBRD1 1 0.84 1.1 43 5.9 82.66 41 8.47 Yes 75 0.39 No 24 0.52 Yes -28 0.39 No 30 54.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 70419124 - NM_018368 LMBRD1 1 3.98 2.31 63 4.58 84.41 29 7.2 Yes 16 1.43 Yes 0 0 No -28 0.54 No 42 61.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 70423688 - NM_018368 LMBRD1 1 0.07 0.1 7 -4.2 73.1 38 6.69 Yes 19 0.97 Yes 0 0 No -37 0.66 No 33 75.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 70453774 - NM_018368 LMBRD1 1 0.67 0.65 33 4.84 83.44 18 5.3 No 5 0.93 Yes 0 0 No -25 0.67 Yes 45 66.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 70453940 - NM_018368 LMBRD1 1 0.16 0.17 11 10.87 90.46 30 5.16 No 8 1.33 Yes 0 0 No -20 0.58 No 50 42.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 70458182 - NM_018368 LMBRD1 1 0.38 0.36 20 -2.5 75.65 28 5.51 No 55 0.97 Yes 0 0 No -27 0.85 Yes 43 86.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 70461514 - NM_018368 LMBRD1 1 0.06 0.1 7 6.85 98.16 18 5.47 No 5 1.81 Yes 0 0 No -17 0.39 No 53 53.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 36104411 - NM_001007527 LMBRD2 1 1.29 0.44 26 9.05 76.98 56 8.23 Yes 43 1.2 Yes 0 0 No -23 0.9 Yes 47 80.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 36105401 - NM_001007527 LMBRD2 1 2.21 1.43 54 10.7 93.38 28 5.52 No 5 0.68 No 0 0 No -27 0.88 Yes 43 90.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 36114587 - NM_001007527 LMBRD2 1 4.18 1.19 48 8.91 88.49 23 5.18 No 49 1.02 Yes 25 0.88 Yes -25 0.78 Yes 45 87.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 36136326 - NM_001007527 LMBRD2 1 0.37 0.15 10 5.36 73.19 26 5.99 Yes 37 1.17 Yes 0 0 No -25 0.85 Yes 45 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 8556610 + NM_001278235 LMCD1 1 2.78 0.32 15 6.7 72.83 25 7.09 Yes 12 0.1 No 24 0.67 Yes -24 0.82 Yes 46 66.26 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 50942330 - NM_033200 LMF2 1 0.92 0.78 36 -1.87 0 25 6.24 Yes 76 -2.74 No 0 0 No -24 0.6 No 46 62.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50942831 - NM_033200 LMF2 1 0.22 0.17 11 3.1 76.79 29 5.28 No 54 2.1 Yes 0 0 No -21 0.32 No 49 28.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50942864 - NM_033200 LMF2 1 2.05 1.36 49 2.58 83.57 16 5.1 No 21 2.12 Yes 0 0 No -19 0.85 Yes 51 86.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50943154 - NM_033200 LMF2 1 0.25 0.18 11 -14.59 62.67 23 5.83 Yes 10 0.3 No 0 0 No -22 0.79 Yes 48 79.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50943747 - NM_033200 LMF2 1 1.65 1.39 53 5.82 80.24 13 4.99 No 25 1.56 Yes 0 0 No -24 0.63 No 51 47.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50944233 - NM_033200 LMF2 1 0.16 0.17 12 2.83 0 15 4.58 No 35 -3.12 No 0 0 No -30 0.76 Yes 40 37.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50945219 - NM_033200 LMF2 1 1.14 0.43 23 1.02 75.78 56 7.41 Yes 43 0.97 Yes 0 0 No -34 0.8 Yes 36 81.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50945534 - NM_033200 LMF2 1 2.91 1.08 43 1.13 74.79 23 5 No 10 0.53 No 0 0 No -22 0.93 Yes 48 90.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50945550 - NM_033200 LMF2 1 0.31 0.1 7 4.9 71.95 18 5.28 No 71 -4.6 No 24 0.62 Yes -24 0.5 No 46 47.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156105651 + NM_001257374 LMNA 1 0.16 0.99 41 9.24 78.27 29 6.93 Yes 58 -0.37 No 24 0.74 Yes -24 0.55 No 42 52.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156105977 + NM_001257374 LMNA 1 0.03 0.18 10 1.82 67.1 16 6.32 Yes NA NA NA 32 0.58 Yes -33 0.29 No 54 38.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156106717 + NM_001257374 LMNA 1 0.03 0.18 8 -4.23 0 15 3.19 No 32 1.03 Yes 0 0 No -34 0.56 No 36 70.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 156106883 + NM_001257374 LMNA 1 0.07 0.69 31 -7.6 0 20 4.58 No 73 -4.59 No 22 0.89 Yes -19 0.36 No 58 36.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156107433 + NM_001257374 LMNA 1 0.02 0.13 7 -1.57 0 21 7.6 Yes 8 0.89 Yes 31 0.88 Yes -20 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 126144422 + NM_001198557 LMNB1 1 0.09 0.42 26 10.43 91.15 36 5.08 No 6 1.25 Yes 0 0 No -30 0.47 No 40 59.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 126145874 + NM_001198557 LMNB1 1 0.57 3.14 67 -6.97 79.51 40 5.1 No 27 0.25 No 0 0 No -25 0.88 Yes 45 85.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 126150861 + NM_001198557 LMNB1 1 0.15 0.92 39 6.91 77.45 46 7.29 Yes 16 0.2 No 28 0.52 Yes -28 0.45 No 33 56.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 126153521 + NM_001198557 LMNB1 1 0.05 0.25 12 12.02 90.86 31 6.08 Yes 74 -0.94 No 0 0 No -35 0.51 No 35 55.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 126154618 + NM_001198557 LMNB1 1 0.05 0.31 17 0.63 0 29 6.24 Yes 40 0.16 No 23 0.55 Yes -28 0.62 No 42 51.75 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 126164292 + NM_001198557 LMNB1 1 0.04 0.15 8 5.51 88.83 42 8.05 Yes 29 0.38 No 0 0 No -25 0.69 Yes 45 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 126168388 + NM_001198557 LMNB1 1 0.13 0.47 21 -7.14 80.59 27 5.3 No 14 0.59 No 0 0 No -26 0.69 Yes 44 78.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2428725 - NM_032737 LMNB2 1 0.13 0.49 23 0.19 58.4 44 5.07 No 58 0.02 No 0 0 No -29 0.59 No 41 55.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2432516 - NM_032737 LMNB2 1 0.17 0.32 17 -1.32 0 9 3.87 No 73 -4.67 No 0 0 No -34 0.62 No 42 63.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2435167 - NM_032737 LMNB2 1 0.09 0.15 11 -14.12 70.61 23 5 No 59 0.39 No 0 0 No -22 0.95 Yes 48 73.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2437721 - NM_032737 LMNB2 1 0.26 0.54 29 6.5 86.2 22 7.21 Yes 9 1.12 Yes 0 0 No -21 0.96 Yes 49 93.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2437795 - NM_032737 LMNB2 1 0.07 0.13 7 -0.2 80.03 43 6.86 Yes 71 0.34 No 0 0 No -42 0.71 Yes 28 63.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 2444256 - NM_032737 LMNB2 1 0.06 0.15 10 9.84 80.94 29 5.74 Yes 16 1.13 Yes 0 0 No -28 0.92 Yes 42 96.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 16713204 - NR_045014 LMO3 1 0.47 0.17 9 2.63 76.54 45 5.53 No 26 1.01 Yes 0 0 No -38 0.94 Yes 32 96.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 87796909 + NM_006769 LMO4 1 0.36 0.25 15 2.4 70.31 35 6.47 Yes 22 1.11 Yes 30 0.5 Yes -38 0.57 No 32 71.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 76302315 + NM_005358 LMO7 1 0.64 0.56 24 8.98 84.19 38 6.1 Yes 25 0 No 0 0 No -21 0.56 No 46 60.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 76364508 + NM_005358 LMO7 1 0.12 0.15 7 11.71 92.45 30 6 Yes 73 1.37 Yes 0 0 No -29 0.63 No 41 70.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 76375603 + NM_005358 LMO7 1 0.25 0.17 11 10.34 91.49 31 5.49 No 23 0.67 No 0 0 No -35 0.3 No 47 38.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 76379614 + NM_005358 LMO7 1 0.47 0.33 19 2.85 74.06 23 5.98 Yes 10 0.82 Yes 23 0.96 Yes -22 0.48 No 35 77.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 76381615 + NM_005358 LMO7 1 0.59 0.39 22 5.62 79.21 38 6.06 Yes 48 1.34 Yes 0 0 No -38 0.75 Yes 32 82.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 76408365 + NM_005358 LMO7 1 0.15 0.17 8 -0.86 0 59 7.94 Yes 11 0.63 No 0 0 No -23 0.75 Yes 47 72.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 76409287 + NM_005358 LMO7 1 15.94 8.42 69 3.19 72.11 61 9.92 Yes 48 1.45 Yes 24 0.91 Yes -24 0.93 Yes 46 91.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 76430616 + NM_005358 LMO7 1 0.1 0.11 7 1.83 71.15 12 4.79 No 43 0.99 Yes 32 0.9 Yes -55 0.48 No 59 26.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 97805038 + NM_014916 LMTK2 1 1.31 0.26 16 4.38 79.4 34 7.11 Yes 21 2.17 Yes 0 0 No -33 0.8 Yes 37 89.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 97806252 + NM_014916 LMTK2 1 0.95 0.17 10 11.81 88.12 35 5.12 No 61 1.06 Yes 0 0 No -35 0.63 No 42 62.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 97820960 + NM_014916 LMTK2 1 0.62 0.17 11 5.88 78.44 24 5.29 No 46 1.41 Yes 0 0 No -23 0.96 Yes 47 96.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 96322245 + NM_175920 LNPEP 1 0.08 0.13 9 -0.87 72.43 34 6.16 Yes 55 0.92 Yes 0 0 No -33 0.7 Yes 37 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 96325585 + NM_175920 LNPEP 1 0.3 0.76 38 5.59 86.52 33 6.76 Yes 20 0.58 No 0 0 No -32 0.59 No 44 70.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 96329863 + NM_175920 LNPEP 1 0.12 0.15 9 5.73 87.38 19 4.97 No -3 0.41 No 0 0 No -21 0.64 No 49 71.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 96349432 + NM_175920 LNPEP 1 0.08 0.15 9 5.15 78.84 41 5.81 Yes 71 -6.02 No 0 0 No -21 0.3 No 39 51.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 96353266 + NM_175920 LNPEP 1 0.13 0.28 18 7.92 81.47 32 7.59 Yes 19 0.82 Yes 0 0 No -23 0.52 No 47 49.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 96358008 + NM_175920 LNPEP 1 0.05 0.14 9 4.73 0 25 5.96 Yes 61 1.24 Yes 0 0 No -25 0.37 No 46 40.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 176800519 - NM_001305008 LNPK 1 2.84 2.29 57 8.86 78.11 37 6.04 Yes 76 0.64 No 0 0 No -24 0.66 No 46 78.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 176804371 - NM_001305008 LNPK 1 1.43 0.86 38 8.38 94.33 20 4.7 No 67 0.75 No 0 0 No -24 0.66 Yes 46 67.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 176805809 - NM_001305008 LNPK 1 0.85 0.51 25 8.88 87.82 23 5.83 Yes 10 1.17 Yes 22 0.81 Yes -22 0.77 Yes 48 93.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 176832551 - NM_001305008 LNPK 1 1.45 1.22 43 8.3 83.21 22 5.52 No 9 1.51 Yes 0 0 No -29 0.5 No 41 58.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 176835146 - NM_001305008 LNPK 1 0.25 0.21 12 2.98 76.43 30 5.66 Yes 31 -2.51 No 0 0 No -22 0.23 No 48 29.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 176837774 - NM_001305008 LNPK 1 0.16 0.11 7 3.14 80.82 22 4.78 No 2 0.53 No 0 0 No -24 0.63 No 49 63.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28153097 - NM_153371 LNX2 1 0.98 0.21 15 7.75 78.35 14 4.57 No 1 1.01 Yes 0 0 No -36 0.54 No 34 57.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 74533546 - NR_040024 LOC100131655 1 1.53 0.26 15 6.38 84.17 35 6.08 Yes 22 -1.22 No 0 0 No -30 0.47 No 40 47.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 76180717 + NR_029411 LOC100133091 1 2.54 0.19 12 9.26 88.57 27 5.74 Yes 14 0.7 No 25 0.94 Yes -26 0.84 Yes 40 67.5 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 76180780 + NR_029411 LOC100133091 1 12.59 1.17 52 11.65 85.51 21 5.08 No 8 1.88 Yes 23 0.84 Yes -24 0.76 Yes 46 82.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71628354 - NR_029192 LOC100133315 1 38.06 2.64 67 5.39 87.81 23 4.84 No 6 0.56 No 26 0.88 Yes -26 0.93 Yes 44 94.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 704592 - NR_033908 LOC100288069 1 0.46 0.14 9 5.91 87.64 32 7.54 Yes 19 1.77 Yes 0 0 No -31 0.7 Yes 39 86.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 30950968 + NR_038253 LOC100288637 1 3.61 0.21 11 12.72 87.7 27 5.57 Yes 72 1.63 Yes 0 0 No -26 0.83 Yes 44 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 30940184 + NR_038253 LOC100288637 1 6.99 0.54 28 8.09 86.09 28 7.54 Yes 15 1.7 Yes 0 0 No -27 0.91 Yes 43 94.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 30940506 + NR_038253 LOC100288637 1 16.83 1.15 42 7.29 88.2 12 5.2 No -1 0.7 No 0 0 No -25 0.65 No 45 60.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 30950968 + NR_038253 LOC100288637 1 69.06 5.06 70 12.72 87.7 27 5.57 Yes 72 1.63 Yes 0 0 No -26 0.83 Yes 44 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 31013201 + NR_038253 LOC100288637 1 7.47 1 41 8.25 90.76 18 6.4 Yes 5 1.33 Yes 0 0 No -27 0.46 No 45 59.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 31027739 + NR_038253 LOC100288637 1 1.12 0.11 8 8.34 85.87 31 5.84 Yes 73 0.28 No 0 0 No -23 0.74 Yes 47 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 31027742 + NR_038253 LOC100288637 1 1.22 0.19 10 4.88 81.15 34 6.08 Yes 76 0.28 No 0 0 No -26 0.82 Yes 44 85.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 31037224 + NR_038253 LOC100288637 1 2.02 0.25 15 9.82 88.03 28 5.57 Yes 64 0.49 No 0 0 No -27 0.82 Yes 43 80.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 31045070 + NR_038253 LOC100288637 1 2.25 0.25 13 6.85 82.43 14 3.93 No 70 0.65 No 0 0 No -32 0.43 No 46 37.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 31047841 + NR_038253 LOC100288637 1 4.29 0.38 21 9.59 83.18 32 5.69 Yes 19 0.94 Yes 0 0 No -31 0.54 No 47 47.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 80058 + NR_130745 LOC100288778 1 2.43 0.49 27 6.17 89.42 26 5.14 No 13 0.41 No 0 0 No -25 0.59 No 45 57.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 83707 + NR_130745 LOC100288778 1 26.52 5.06 70 9.73 92.55 24 7.42 Yes 11 0.92 Yes 0 0 No -23 0.64 No 47 65.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 87265 + NR_130745 LOC100288778 1 1.19 0.22 13 -4.17 0 18 4.36 No 14 0.92 Yes 20 0.42 Yes -17 0.54 No 44 62.95 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 87268 + NR_130745 LOC100288778 1 0.79 0.15 9 2.5 81.49 21 4.69 No 17 0.91 Yes 20 0.42 Yes -20 0.74 Yes 50 52.64 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 88836 + NR_130745 LOC100288778 1 2.55 0.51 25 7.76 78.21 19 7.07 Yes 6 2.03 Yes 25 0.43 Yes -18 0.78 Yes 52 94.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 90103 + NR_130745 LOC100288778 1 0.57 0.14 7 0.93 85.74 23 4.9 No 10 0.68 No 0 0 No -22 0.81 Yes 48 89.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123559044 + NR_027442 LOC100288842 1 2.53 0.86 40 7.01 79.56 47 7.6 Yes 34 0.39 No 0 0 No -46 0.72 Yes 24 86.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 102019509 + NM_001347879 LOC100289561 1 0.91 0.15 8 3.01 0 33 5.41 No 30 0.87 Yes 0 0 No -35 0.73 Yes 35 76.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 55298802 + NM_001242804 LOC100505549 1 3.91 1.36 43 -1.72 60.78 57 7.2 Yes 44 0.96 Yes 0 0 No -49 0.64 No 21 76.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 55304477 + NM_001242804 LOC100505549 1 1.66 0.56 23 11.83 92.63 26 9.14 Yes 40 1.52 Yes 0 0 No -26 0.62 No 44 75.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 55305973 + NM_001242804 LOC100505549 1 0.27 0.1 7 5.77 82.32 34 9.48 Yes 39 0.81 Yes 0 0 No -33 0.81 Yes 37 76.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 55306713 + NM_001242804 LOC100505549 1 0.71 0.22 13 4.93 67.45 43 6.81 Yes 30 0.33 No 0 0 No -32 0.36 No 38 65.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 55308815 + NM_001242804 LOC100505549 1 1.12 0.36 23 10.81 95.99 28 5.29 No 41 1.88 Yes 0 0 No -53 0.46 No 17 65.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 55309145 + NM_001242804 LOC100505549 1 2.47 0.82 38 1.43 82.35 48 5.25 No 47 1.22 Yes 0 0 No -41 0.72 Yes 29 67.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 20257323 + NR_134567 LOC100506098 1 1.59 0.19 12 4.57 85.31 23 5.19 No 34 0.39 No 0 0 No -22 0.55 No 48 44.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 20257391 + NR_134567 LOC100506098 1 6.25 0.56 29 2.27 75.35 23 4.89 No 68 -4.06 No 25 0.95 Yes -22 0.96 Yes 48 87.85 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 64456978 + NR_120420 LOC100507006 1 1.39 0.22 11 -2.84 0 18 4.36 No 8 0.12 No 0 0 No -17 0.54 No 50 50.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 64462385 + NR_120420 LOC100507006 1 1.9 0.18 11 6.23 85.74 27 5.2 No 14 0.25 No 0 0 No -20 0.67 Yes 44 70.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 64475457 + NR_120420 LOC100507006 1 1.18 0.19 11 6.98 83.54 31 5.79 Yes 38 0.11 No 30 0.19 Yes -19 0.45 No 51 45.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 68826411 - NR_120458 LOC100507195 1 30.83 3.88 63 6.65 80.86 13 6.32 Yes 50 0.68 No 0 0 No -30 0.55 No 35 62.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 68826460 - NR_120458 LOC100507195 1 23.45 2.67 59 6.23 75.14 27 6.52 Yes 1 0.66 No 18 0.44 Yes -26 0.87 Yes 44 83.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 68827634 - NR_120458 LOC100507195 1 10.48 1.14 38 11.52 94.82 33 6.55 Yes 20 0.73 No 0 0 No -27 0.66 No 43 67.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 68828925 - NR_120458 LOC100507195 1 86.95 8.86 66 8.47 93.21 24 3.39 No 14 0.39 No 0 0 No -26 0.62 No 44 87.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 68828939 - NR_120458 LOC100507195 1 2.31 0.25 13 2.46 66.88 32 6.73 Yes 19 0.18 No 0 0 No -31 0.83 Yes 39 82.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 139143798 + NR_121608 LOC100507291 1 1.37 0.1 7 9.09 99.09 39 7.94 Yes 26 2.22 Yes 0 0 No -38 0.9 Yes 32 96.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 92860916 + NR_144532 LOC100507616 1 17.25 4.44 72 6.63 75 41 7.13 Yes 6 1.1 Yes 0 0 No -40 0.88 Yes 30 88.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 92860966 + NR_144532 LOC100507616 1 1.12 0.29 15 3.57 78.36 34 6.29 Yes 56 1.09 Yes 0 0 No -33 0.79 Yes 32 58.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 92876303 + NR_144532 LOC100507616 1 2.77 0.74 38 11.87 88.49 19 5.57 Yes 6 1.31 Yes 0 0 No -18 0.82 Yes 52 78.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 102053579 + NR_038967 LOC100630923 1 1.59 0.99 41 7.85 88.28 26 5.66 Yes 43 0.48 No 0 0 No -25 0.86 Yes 45 88.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 2514811 + NR_121638 LOC100996583 1 0.98 0.21 10 1.37 76.39 20 4.46 No 43 0.25 No 0 0 No -26 0.69 Yes 44 81.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 114589025 - NR_110174 LOC101060091 1 0.98 0.11 7 6.66 81.21 15 5 No 2 1.11 Yes 23 0.87 Yes -22 0.48 No 48 53.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 114613802 - NR_110174 LOC101060091 1 22.13 1.14 43 11.22 95.44 40 5.26 No 67 0.91 Yes 0 0 No -27 0.68 Yes 43 66.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 114618996 - NR_110174 LOC101060091 1 10.42 0.76 33 8.14 93.84 24 5.25 No 59 -1.87 No 0 0 No -23 0.81 Yes 47 70.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 643113 + NR_110054 LOC101926963 1 1.32 0.17 11 3.71 72.32 34 7.55 Yes 21 1.47 Yes 0 0 No -33 0.71 Yes 37 89.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 179280544 + NR_110204 LOC101927027 1 0.89 0.75 35 7.13 93.61 31 6.73 Yes 66 0.24 No 24 0.46 Yes -30 0.45 No 40 56.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 179283237 + NR_110204 LOC101927027 1 0.79 0.68 34 6.46 87.44 29 6.31 Yes 16 1.02 Yes 28 0.85 Yes -28 0.9 Yes 42 93.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 179295382 + NR_110204 LOC101927027 1 2.53 0.25 12 7.26 82.34 30 4.95 No 44 0.75 No 27 0.68 Yes -27 0.78 Yes 43 90.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 179295404 + NR_110204 LOC101927027 1 6.41 0.39 22 -0.07 0 13 4.12 No 66 0.74 No 31 0.21 Yes -49 0.59 No 21 82.94 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 179295421 + NR_110204 LOC101927027 1 52.17 4.22 69 5.58 93.81 13 5.1 No 0 0.11 No 31 0.21 Yes -19 0.44 No 51 43.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 179294952 + NR_110204 LOC101927027 1 2.42 0.11 7 8.09 85.96 17 5.39 No 4 1.22 Yes 0 0 No -22 0.44 No 45 50.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 179295382 + NR_110204 LOC101927027 1 9.98 0.71 31 7.26 82.34 30 4.95 No 44 0.75 No 27 0.68 Yes -27 0.78 Yes 43 90.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 179295773 + NR_110204 LOC101927027 1 0.41 0.26 13 4.19 0 41 8.35 Yes 28 2.88 Yes 40 0.87 Yes -40 0.78 Yes 30 94.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 179296896 + NR_110204 LOC101927027 1 1.94 1.19 54 6.99 80.36 20 4.59 No 59 0.26 No 22 0.86 Yes -22 0.79 Yes 48 81.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24914595 + NR_110032 LOC101927045 1 34.2 2.39 60 4.06 70.59 37 6.51 Yes 24 0.85 Yes 0 0 No -32 0.71 Yes 38 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 71587390 - NR_110647 LOC101927069 1 189.42 15.79 72 6.53 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.74 Yes 51 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 71587480 - NR_110647 LOC101927069 1 1.54 0.11 7 5.82 88.68 22 5.47 No 9 0.66 No 0 0 No -21 0.78 Yes 49 86.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 71587558 - NR_110647 LOC101927069 1 166.45 13.46 70 8.96 94.82 19 5.35 No 6 0.33 No 0 0 No -24 0.77 Yes 46 64.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 28285589 + NR_110687 LOC101927151 1 1.46 0.14 9 4.58 77.01 22 5.8 Yes 9 1.81 Yes 21 0.96 Yes -21 0.69 Yes 49 79.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 28285605 + NR_110687 LOC101927151 1 2.55 0.22 10 9.27 88.57 19 5 No 25 1.8 Yes 21 0.96 Yes -18 0.65 No 52 84.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 28289296 + NR_110687 LOC101927151 1 0.82 0.1 7 5.81 93.66 32 5.23 No 16 -0.58 No 0 0 No -31 0.7 Yes 39 80.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 28290125 + NR_110687 LOC101927151 1 32.26 4.64 70 2.7 76.06 42 7.77 Yes 29 0.58 No 36 0.81 Yes -36 0.69 Yes 34 85.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 28294482 + NR_110687 LOC101927151 1 11.65 1.68 56 4.99 78.31 28 5.87 Yes 57 0.33 No 0 0 No -27 0.66 Yes 43 76.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5017174 + NR_135657 LOC101928000 1 0.83 0.57 25 5 78.81 20 4.33 No 4 0.57 No 0 0 No -22 0.84 Yes 48 83.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 12100190 + NR_134928 LOC101928464 1 5.2 0.94 38 9.07 84.89 27 9.06 Yes -3 -1.63 No 0 0 No -26 0.63 No 44 72.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 12100983 + NR_134928 LOC101928464 1 9.01 1.72 54 4.46 76.64 34 7.14 Yes 42 0.69 No 33 0.79 Yes -33 0.88 Yes 37 87.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 12111944 + NR_134928 LOC101928464 1 3.5 0.64 31 2.4 0 12 4.24 No 22 1.78 Yes 0 0 No -34 0.93 Yes 36 95.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 41708844 + NR_120423 LOC101929140 1 11.14 1.1 42 9.89 85.86 29 7.27 Yes 24 1.9 Yes 0 0 No -28 0.94 Yes 42 92.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 119692016 + NR_125976 LOC101929147 1 1.25 0.4 21 6.36 90.46 37 5.57 Yes 42 1.08 Yes 0 0 No -21 0.93 Yes 49 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 119693195 + NR_125976 LOC101929147 1 0.32 0.13 7 -6.37 0 13 4.12 No 0 0.57 No 0 0 No -27 0.6 No 58 49.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90737191 - NR_125822 LOC101929709 1 1.03 0.17 9 1.13 0 40 8.04 Yes 55 0.43 No 21 0.69 Yes -39 0.79 Yes 31 85.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 101550607 + NR_109849 LOC102606465 1 11.8 2.56 65 1.94 73.1 27 5.19 No 46 -4.76 No 26 0.87 Yes -26 0.89 Yes 44 94.87 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 100658890 - NR_120520 LOC102724094 1 12.8 2.68 50 8.92 88.22 17 4.7 No 13 -0.58 No 0 0 No -25 0.84 Yes 45 72.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 45969928 - NR_135480 LOC102724532 1 0.44 0.1 7 1.46 0 46 6.15 Yes 33 0.54 No 0 0 No -25 0.68 Yes 45 84.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 43012939 + NR_135319 LOC105370177 1 5.32 1 37 2.39 74.16 24 5.45 No 11 1.2 Yes 0 0 No -23 0.77 Yes 47 72.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43012943 + NR_135319 LOC105370177 1 1.36 0.22 11 -1.65 0 28 5.74 Yes 15 1.18 Yes 0 0 No -27 0.76 Yes 43 73.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43054070 + NR_135319 LOC105370177 1 1.15 0.18 11 10.87 89.79 24 9 Yes 11 1.74 Yes 0 0 No -30 0.72 Yes 40 81.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43054158 + NR_135319 LOC105370177 1 2.71 0.43 24 8.35 82.78 47 7.78 Yes 34 1.06 Yes 0 0 No -46 0.94 Yes 24 96.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 43059685 + NR_135319 LOC105370177 1 11.09 1.71 54 9.4 80.4 25 6.15 Yes 12 1.48 Yes 0 0 No -24 0.77 Yes 46 90.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150136632 + NR_135098 LOC105371433 1 9.85 1.26 46 4.65 83.8 28 6.55 Yes 15 -0.03 No 27 0.86 Yes -27 0.88 Yes 43 90.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150137120 + NR_135098 LOC105371433 1 4.39 0.54 23 9.18 83.36 18 6.14 Yes 5 -1.1 No 0 0 No -25 0.53 No 45 78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 150145959 + NR_135098 LOC105371433 1 1.05 0.15 7 3.26 0 13 4.26 No 20 1.69 Yes 0 0 No -32 0.49 No 38 81.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 150152355 + NR_135098 LOC105371433 1 124.85 4.44 72 10.91 89.16 29 7.13 Yes 16 2.15 Yes 0 0 No -28 0.64 No 42 84.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 28937911 + NR_015341 LOC107133515 1 1.05 0.64 33 -4.26 0 41 7.12 Yes 28 1.69 Yes 0 0 No -40 0.7 Yes 30 80.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2488097 - NR_037844 LOC115110 1 2.38 0.11 7 0.06 81.81 20 4.8 No 57 -1.97 No 0 0 No -19 0.73 Yes 51 35.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 1335358 + NR_015434 LOC148413 1 1.93 0.31 17 7.09 79.37 31 6.63 Yes 55 0.17 No 32 0.68 Yes -25 0.6 No 40 46.13 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 132258917 + NR_026922 LOC150776 1 0.4 0.1 7 -3.73 55 9 4.87 No -4 1.1 Yes 21 0.95 Yes -8 0.38 No 62 71.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 132260027 + NR_026922 LOC150776 1 19.15 3.15 63 10.22 87.74 63 5.61 Yes 50 1.89 Yes 0 0 No -36 0.82 Yes 34 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 132261438 + NR_026922 LOC150776 1 1.37 0.25 14 11.6 95.65 34 6.26 Yes 21 1.5 Yes 0 0 No -33 0.73 Yes 37 85.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 132263929 + NR_026922 LOC150776 1 1.96 0.31 18 2.32 65.9 39 6.53 Yes 63 0.62 No 0 0 No -38 0.52 No 32 80.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 132269287 + NR_026922 LOC150776 1 5 0.36 18 10.05 86.72 172 13.93 Yes 12 2 Yes 0 0 No -24 0.88 Yes 46 93.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 132277386 + NR_026922 LOC150776 1 3.14 0.67 34 7.33 75.05 54 7.47 Yes 15 1.37 Yes 27 0.92 Yes -27 0.83 Yes 43 87.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 197341714 - NR_003266 LOC220729 1 7.12 0.94 38 -6.93 74.81 50 8.29 Yes 37 1.73 Yes 0 0 No -41 0.5 No 21 55.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 197351059 - NR_003266 LOC220729 1 8.22 0.21 11 -0.45 0 13 4.36 No 30 1.92 Yes 31 0.96 Yes -42 0.93 Yes 28 95.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 197351592 - NR_003266 LOC220729 1 11.19 0.65 27 3.86 75.39 26 5.85 Yes 13 1.08 Yes 25 0.74 Yes -25 0.79 Yes 45 87.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 31515589 - NM_001243538 LOC283710 1 6.18 2.9 65 3.08 65.8 27 6.76 Yes 29 0.94 Yes 0 0 No -26 0.67 Yes 44 60.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 31515635 - NM_001243538 LOC283710 1 19.08 10.31 71 10.63 84 29 5.92 Yes 24 0.35 No 28 0.49 Yes -31 0.75 Yes 42 69.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 31515635 - NM_001243538 LOC283710 1 1.78 0.92 35 10.63 84 29 5.92 Yes 24 0.35 No 28 0.49 Yes -31 0.75 Yes 42 69.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 31515913 - NM_001243538 LOC283710 1 5.14 1.49 46 3.94 82.15 29 5.78 Yes 69 1.26 Yes 0 0 No -29 0.77 Yes 41 76.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 31515913 - NM_001243538 LOC283710 1 0.43 0.18 10 3.94 82.15 29 5.78 Yes 69 1.26 Yes 0 0 No -29 0.77 Yes 41 76.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 31520268 - NM_001243538 LOC283710 1 2.6 0.75 31 10.62 88.27 38 7.14 Yes 25 0.99 Yes 0 0 No -32 0.59 No 33 69.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 74371089 - NR_026950 LOC283922 1 2.31 0.13 8 4.18 88.38 27 4.79 No 2 1.28 Yes 0 0 No -26 0.83 Yes 44 63.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 74372503 - NR_026950 LOC283922 1 1.26 0.18 11 4.04 81.47 11 5.8 Yes -2 0.52 No 28 0.52 Yes -25 0.46 No 56 40.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 74372559 - NR_026950 LOC283922 1 11.94 1.94 55 4.8 74 69 7.03 Yes 72 1.17 Yes 25 0.78 Yes -25 0.81 Yes 45 61.94 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 74382397 - NR_026950 LOC283922 1 7.55 0.72 38 7.85 85.51 28 5.66 Yes 15 0.98 Yes 0 0 No -27 0.95 Yes 43 98.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 74383758 - NR_026950 LOC283922 1 0.64 0.1 7 6.45 77.91 62 7.15 Yes 49 1.65 Yes 28 0.7 Yes -52 0.76 Yes 18 84.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 74393455 - NR_026950 LOC283922 1 0.59 0.17 9 9.93 85.05 35 6.78 Yes 22 2.12 Yes 0 0 No -34 0.78 Yes 36 90.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 74401534 - NR_026950 LOC283922 1 2.6 0.58 26 9.11 86.37 28 5.83 Yes 15 0.25 No 0 0 No -27 0.88 Yes 43 75.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 74401583 - NR_026950 LOC283922 1 9.48 1.83 58 11.19 85.05 24 5.48 No 75 1.12 Yes 23 0.83 Yes -23 0.71 Yes 47 79.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 87276902 - NR_026846 LOC285074 1 8.49 0.72 35 6.26 0 18 4.57 No 55 1.46 Yes 0 0 No -17 0.76 Yes 53 67.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 87276914 - NR_026846 LOC285074 1 5.59 0.56 26 4.06 77.64 16 3.5 No 43 1.46 Yes 0 0 No -55 0.52 No 51 52.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 87276939 - NR_026846 LOC285074 1 4.06 0.47 26 -1.67 68.81 31 6.92 Yes 18 1.46 Yes 21 0.53 Yes -30 0.92 Yes 40 85.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 61371402 - NR_036496 LOC339803 1 2.15 1.26 50 6.83 80.1 26 5.14 No 73 0.78 Yes 28 0.8 Yes -28 0.64 No 42 67.73 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 61371778 - NR_036496 LOC339803 1 0.87 0.46 26 8.07 83.39 33 6.63 Yes 16 0.21 No 24 0.86 Yes -24 0.82 Yes 46 85.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 9802928 + NR_046444 LOC374443 1 1.42 0.43 22 9.45 94.18 24 5.87 Yes 11 1.65 Yes 0 0 No -35 0.63 No 47 70.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 9809163 + NR_046444 LOC374443 1 109.39 18.18 72 8.96 85.86 24 5.2 No 28 0.67 No 0 0 No -23 0.8 Yes 47 93.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 3751428 - NR_034031 LOC389906 1 0.43 0.36 18 8.55 81.78 40 9.06 Yes 7 1.76 Yes 0 0 No -19 0.62 No 31 66.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 38759110 - NM_001289912 LOC400927-CSNK1E 1 5.11 0.76 38 9.04 90.16 30 4.96 No 13 0.89 Yes 29 0.81 Yes -25 0.66 Yes 41 73.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38763793 - NM_001289912 LOC400927-CSNK1E 1 12.29 1.68 53 7.9 76.48 40 4.35 No 0 1.19 Yes 0 0 No -31 0.64 No 39 69.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 38766051 - NM_001289912 LOC400927-CSNK1E 1 46.73 6.07 71 1.83 71.9 40 6.78 Yes 27 0.29 No 32 0.53 Yes -32 0.64 No 31 72.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 65132217 - NR_036586 LOC400958 1 0.9 0.1 7 2.28 75.55 35 6.24 Yes 22 -0.07 No 0 0 No -34 0.84 Yes 36 93.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 65132307 - NR_036586 LOC400958 1 0.78 0.15 7 -6.04 0 24 4.83 No 62 -0.77 No 0 0 No -21 0.5 No 55 29.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 65132311 - NR_036586 LOC400958 1 2.1 0.22 11 -4.67 0 20 4.41 No 74 -0.8 No 0 0 No -17 0.45 No 53 34.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 65132369 - NR_036586 LOC400958 1 2.35 0.39 21 4.86 80.36 20 4.8 No 73 -2.5 No 0 0 No -23 0.47 No 51 67.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 65138730 - NR_036586 LOC400958 1 6.49 0.97 40 8.75 88.13 31 6.08 Yes 71 -3.01 No 0 0 No -30 0.78 Yes 40 72.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 65139719 - NR_036586 LOC400958 1 1.44 0.22 12 12.5 84.41 11 5.83 Yes 25 0.52 No 0 0 No -29 0.76 Yes 41 76.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 65145093 - NR_036586 LOC400958 1 18.64 2.83 59 9.1 84.23 27 5.74 Yes 44 0.96 Yes 0 0 No -26 0.86 Yes 44 81.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 65149883 - NR_036586 LOC400958 1 23.31 3.47 64 1.12 74.93 20 6.08 Yes 31 0.43 No 0 0 No -19 0.69 Yes 51 64.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 65149911 - NR_036586 LOC400958 1 14.43 2.04 60 -1.82 0 16 4.12 No 3 0.42 No 0 0 No -29 0.28 No 60 27.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 65149919 - NR_036586 LOC400958 1 2.73 0.42 22 -12.08 0 12 4.24 No 35 -3.4 No 0 0 No -21 0.43 No 49 25.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 65158122 - NR_036586 LOC400958 1 5.08 0.65 31 10.43 81.67 46 7.81 Yes 33 2.79 Yes 0 0 No -37 0.54 No 25 75.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 30591012 - NR_038889 LOC401320 1 10.57 0.67 31 9.02 91.3 10 5.57 Yes 74 0.14 No 24 0.57 Yes -24 0.61 No 46 79.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 30591012 - NR_038889 LOC401320 1 2.95 0.17 11 9.02 91.3 10 5.57 Yes 74 0.14 No 24 0.57 Yes -24 0.61 No 46 79.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 30591096 - NR_038889 LOC401320 1 10.1 0.65 33 7.01 83.2 26 6.14 Yes 2 0.74 No 0 0 No -26 0.58 No 42 46.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 30597650 - NR_038889 LOC401320 1 2.04 0.14 9 7.16 84.59 15 6.98 Yes 51 0.67 No 0 0 No -25 0.57 No 45 47.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 30602998 - NR_038889 LOC401320 1 8.29 0.51 25 9.43 86.46 14 5.66 Yes 1 1.21 Yes 0 0 No -27 0.86 Yes 43 90.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 30603510 - NR_038889 LOC401320 1 9.97 1.14 46 -2.03 68.88 28 5.36 No 42 0.35 No 27 0.8 Yes -27 0.86 Yes 43 29.25 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 30604415 - NR_038889 LOC401320 1 8.06 0.86 35 13.79 96.81 25 5.57 Yes 68 0.93 Yes 24 0.83 Yes -24 0.69 Yes 46 64.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 30616201 - NR_038889 LOC401320 1 3.54 0.39 22 -4.09 64.38 36 6.75 Yes 23 0.59 No 0 0 No -35 0.76 Yes 35 75.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 36357221 - NR_036750 LOC440434 1 0.84 0.21 13 8.02 82.2 33 7.26 Yes 20 0.54 No 0 0 No -32 0.62 No 34 81.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 36361954 - NR_036750 LOC440434 1 1.96 0.21 10 10 85.23 22 5.29 No 76 -2.97 No 0 0 No -22 0.75 Yes 48 86.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 36367487 - NR_036750 LOC440434 1 1.76 0.31 17 5.29 78.49 31 6.58 Yes 48 1.07 Yes 0 0 No -30 0.69 Yes 40 82.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36367523 - NR_036750 LOC440434 1 1.01 0.18 10 10.21 89.18 25 8.7 Yes 12 1.06 Yes 24 0.73 Yes -25 0.66 Yes 45 72.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 36393929 - NR_036750 LOC440434 1 4.67 0.76 40 6 83.86 26 7.49 Yes 13 0.79 Yes 0 0 No -25 0.86 Yes 45 71.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36395704 - NR_036750 LOC440434 1 1.38 0.24 13 9.13 90.85 38 6.58 Yes 5 0.44 No 31 0.55 Yes -31 0.78 Yes 39 80.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 65191815 - NR_103527 LOC441242 1 4.79 0.85 37 4.88 76.68 22 6.24 Yes 73 1.56 Yes 0 0 No -21 0.91 Yes 49 76.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65191884 - NR_103527 LOC441242 1 0.41 0.1 7 1.6 73.6 17 6.18 Yes 4 0.88 Yes 0 0 No -24 0.68 Yes 46 67.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 9447242 + NR_024374 LOC642846 1 2.11 0.18 11 5.72 81.28 30 5.84 Yes 11 1.02 Yes 0 0 No -23 0.9 Yes 47 91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 25179702 + NM_001321724 LOC645177 1 0.79 0.11 8 -0.2 61.77 32 7.02 Yes 19 1.22 Yes 28 0.69 Yes -31 0.93 Yes 39 91.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 120379125 + NR_037630 LOC645513 1 13.55 1.6 53 9.99 89.9 28 5.65 Yes 15 0.92 Yes 0 0 No -27 0.9 Yes 43 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 120396236 + NR_037630 LOC645513 1 3.64 0.63 34 8.17 94.05 24 5.31 No 65 1.13 Yes 0 0 No -23 0.84 Yes 47 82.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 120400980 + NR_037630 LOC645513 1 8.34 1.47 43 7.18 86.07 41 6.68 Yes 28 1.27 Yes 0 0 No -29 0.7 Yes 41 78.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 120401424 + NR_037630 LOC645513 1 0.86 0.15 8 0.02 72.21 17 4.62 No 73 0.33 No 0 0 No -20 0.72 Yes 50 82.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 120409448 + NR_037630 LOC645513 1 5.75 0.96 43 8.03 82.78 33 8.97 Yes 20 2.09 Yes 0 0 No -32 0.82 Yes 38 85.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 120409799 + NR_037630 LOC645513 1 34.13 5.79 71 10.04 89.91 39 6.32 Yes 20 1.59 Yes 30 0.82 Yes -32 0.7 Yes 38 86.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 120418816 + NR_037630 LOC645513 1 3.13 1.06 41 6.23 84.94 29 5.28 No 70 0.75 No 28 0.45 Yes -33 0.37 No 38 60.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 2665188 + NR_015441 LOC652276 1 0.62 0.1 7 10.49 81.96 55 5.52 No 28 1.46 Yes 0 0 No -40 0.83 Yes 30 92.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185271474 - NR_040108 LOC728175 1 8.73 2.35 57 5.87 76.75 12 6.08 Yes -1 0.95 Yes 29 0.62 Yes -26 0.48 No 40 71.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 1600638 - NR_003713 LOC728613 1 10.2 0.78 35 7.17 82.76 17 5.78 Yes 25 0.92 Yes 0 0 No -23 0.78 Yes 47 89.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1612188 - NR_003713 LOC728613 1 13.13 1.01 43 11.57 93.87 21 7.02 Yes 48 0.62 No 0 0 No -27 0.48 No 43 45.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 1627042 - NR_003713 LOC728613 1 1.07 0.13 8 11.84 87.25 22 5.74 Yes 9 1.2 Yes 21 0.77 Yes -21 0.84 Yes 49 92.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 1632867 - NR_003713 LOC728613 1 33.62 2.18 61 3.06 84.79 17 4.69 No 4 0.86 Yes 24 0.56 Yes -24 0.83 Yes 46 83.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 150105729 + NR_027237 LOC728743 1 18.5 2.22 57 7.46 86.26 20 4.52 No 7 1.16 Yes 0 0 No -19 0.84 Yes 51 87.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 119548328 + NR_109983 LOC729218 1 4.93 0.89 38 11.26 92.09 32 7.79 Yes 19 0.68 No 0 0 No -27 0.63 No 43 67.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 119551016 + NR_109983 LOC729218 1 3.57 0.26 15 4.51 84.85 31 5.72 Yes 29 1.23 Yes 0 0 No -30 0.44 No 43 55.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 20825745 + NM_001199053 LOC81691 1 0.86 0.11 8 7.19 83.74 22 5.74 Yes 9 1.22 Yes 0 0 No -21 0.87 Yes 49 91.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 20825748 + NM_001199053 LOC81691 1 0.96 0.13 9 4.6 86.46 25 6 Yes 12 1.19 Yes 0 0 No -24 0.91 Yes 46 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 20826306 + NM_001199053 LOC81691 1 13.64 1.9 60 7.04 98.88 24 5.1 No 72 0.61 No 27 0.58 Yes -24 0.68 Yes 46 57.38 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 20826332 + NM_001199053 LOC81691 1 1.23 0.1 7 3.97 90.02 21 4.57 No 41 0.1 No 0 0 No -20 0.88 Yes 54 70.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 20852963 + NM_001199053 LOC81691 1 0.61 0.13 7 0.08 0 36 5.62 Yes 32 1.41 Yes 0 0 No -35 0.44 No 35 53.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 20856423 + NM_001199053 LOC81691 1 1.17 0.22 10 6.11 82.83 14 5.24 No 1 0.89 Yes 0 0 No -24 0.67 Yes 49 81.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5692254 - NM_001276480 LONP1 1 0.53 0.86 37 11 85.96 25 5.57 Yes 58 -1.1 No 24 0.76 Yes -24 0.7 Yes 49 63.82 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 5703837 - NM_001276480 LONP1 1 0.27 0.69 34 8.28 87.91 20 5.1 No 69 0.47 No 0 0 No -20 0.84 Yes 50 74.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 5704230 - NM_001276480 LONP1 1 0.35 0.97 40 8.38 81.61 31 5.66 Yes 59 -0.22 No 0 0 No -25 0.39 No 40 33.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 5704267 - NM_001276480 LONP1 1 0.24 0.63 31 6.37 81.67 35 6.4 Yes 48 -2.78 No 0 0 No -34 0.82 Yes 36 79.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 5708021 - NM_001276480 LONP1 1 0.16 0.22 13 6.39 80.97 23 5.39 No 45 -2.82 No 0 0 No -27 0.77 Yes 43 53.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 48286135 + NM_001348078 LONP2 1 0.11 0.17 9 6.33 84.21 25 4.95 No 41 0.44 No 0 0 No -24 0.86 Yes 46 69.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 48290554 + NM_001348078 LONP2 1 0.44 0.65 31 8.04 85.84 28 6.56 Yes 63 0.57 No 0 0 No -27 0.65 No 43 49.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 48291676 + NM_001348078 LONP2 1 0.04 0.11 7 2.66 84.34 21 4.9 No 56 -5.57 No 0 0 No -25 0.79 Yes 45 78.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 48292535 + NM_001348078 LONP2 1 0.13 0.31 16 2.23 0 10 4 No 59 2.05 Yes 0 0 No -27 0.72 Yes 43 44.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 48299937 + NM_001348078 LONP2 1 0.05 0.14 9 7.44 98.01 32 6.99 Yes 19 0.91 Yes 0 0 No -32 0.62 No 38 65.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 48306520 + NM_001348078 LONP2 1 0.09 0.22 13 5.48 76.99 28 7.27 Yes -2 1.09 Yes 0 0 No -27 0.64 No 43 57.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 48329995 + NM_001348078 LONP2 1 0.67 1.19 44 3.19 73.57 26 6.4 Yes 13 0.69 No 25 0.81 Yes -25 0.74 Yes 45 49.4 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 48330007 + NM_001348078 LONP2 1 0.1 0.18 10 5.63 0 16 4.58 No 12 0.82 Yes 0 0 No -37 0.45 No 46 71.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 48330938 + NM_001348078 LONP2 1 0.2 0.44 25 6.19 75.38 28 6.48 Yes 44 1.06 Yes 0 0 No -27 0.86 Yes 43 83.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 48370303 + NM_001348078 LONP2 1 0.15 0.24 12 9.11 86.24 17 5.15 No 46 1.38 Yes 23 0.71 Yes -23 0.87 Yes 47 77.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 48374535 + NM_001348078 LONP2 1 0.13 0.21 14 9.11 82.35 28 4.84 No 12 0.8 Yes 0 0 No -31 0.82 Yes 39 80.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 48381475 + NM_001348078 LONP2 1 0.13 0.19 13 6.35 77.55 26 5.48 No 66 1.51 Yes 0 0 No -26 0.82 Yes 44 75.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 48381990 + NM_001348078 LONP2 1 0.17 0.28 17 3.42 77.34 18 5.35 No 39 1.21 Yes 23 0.83 Yes -24 0.47 No 46 67.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 48383810 + NM_001348078 LONP2 1 0.08 0.13 7 9.91 88.36 36 6.24 Yes 23 1.54 Yes 0 0 No -35 0.83 Yes 35 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 12580760 - NM_152271 LONRF1 1 1.28 0.74 36 1.97 0 32 9.21 Yes 19 0.74 No 0 0 No -31 0.63 No 39 79.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 12594274 - NM_152271 LONRF1 1 42.08 7.79 71 5.63 80.51 22 5.17 No 65 0.11 No 25 0.68 Yes -21 0.51 No 45 42.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 12594337 - NM_152271 LONRF1 1 0.54 0.11 7 2.83 0 15 4.43 No 2 0.09 No 32 0.81 Yes -31 0.32 No 48 36.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 12594870 - NM_152271 LONRF1 1 0.4 0.18 12 7.07 88.58 21 5.2 No 20 0.29 No 20 0.41 Yes -20 0.53 No 50 43.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 1467018 - NM_024830 LPCAT1 1 0.12 0.38 17 -6.99 0 9 4.46 No -4 0.46 No 20 0.92 Yes -8 0.58 No 62 58.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 1467454 - NM_024830 LPCAT1 1 1.59 5.33 65 6.63 87.51 29 5.9 Yes 16 1.4 Yes 21 0.95 Yes -28 0.68 Yes 42 80.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 1468122 - NM_024830 LPCAT1 1 0.03 0.13 7 1.46 80.61 24 4.99 No 74 0.28 No 0 0 No -23 0.87 Yes 47 65.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 1468671 - NM_024830 LPCAT1 1 0.1 0.32 14 10.3 86.43 28 5.81 Yes 15 1.06 Yes 0 0 No -27 0.62 No 49 63.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 1470600 - NM_024830 LPCAT1 1 0.79 2.57 51 10.87 85.78 39 6.4 Yes 26 1.04 Yes 0 0 No -25 0.74 Yes 45 79.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1471158 - NM_024830 LPCAT1 1 0.06 0.18 12 8.26 76.79 24 5.38 No 46 0.16 No 0 0 No -24 0.64 No 46 72.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 1475404 - NM_024830 LPCAT1 1 0.05 0.13 8 5.83 73.77 30 6 Yes 17 0.84 Yes 0 0 No -29 0.96 Yes 41 96.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1483605 - NM_024830 LPCAT1 1 0.09 0.31 15 -0.62 0 22 7.66 Yes 74 1.08 Yes 25 0.59 Yes -22 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 1484456 - NM_024830 LPCAT1 1 0.05 0.18 8 1.28 73.97 23 4.79 No 68 1.19 Yes 0 0 No -23 0.58 No 47 47.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 1486950 - NM_024830 LPCAT1 1 0.43 1.68 49 10.24 85.18 39 6.51 Yes 13 1.04 Yes 0 0 No -25 0.83 Yes 45 85.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1487606 - NM_024830 LPCAT1 1 0.06 0.26 17 8.71 83.22 24 4.78 No 41 0.79 Yes 0 0 No -49 0.49 No 21 56.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 1487775 - NM_024830 LPCAT1 1 0.12 0.46 26 4.15 71.04 28 5.74 Yes 58 -2.99 No 0 0 No -26 0.68 Yes 44 61.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 1491544 - NM_024830 LPCAT1 1 0.39 1.03 33 8.51 81.95 26 6.89 Yes 13 0.54 No 0 0 No -25 0.96 Yes 45 94.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 1491744 - NM_024830 LPCAT1 1 0.05 0.11 8 11.46 89.38 19 7.14 Yes 6 1.66 Yes 0 0 No -18 0.79 Yes 52 89.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1492699 - NM_024830 LPCAT1 1 0.06 0.13 7 8.83 91.17 21 5.83 Yes 74 -1.71 No 0 0 No -27 0.83 Yes 43 88.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 34653431 - NM_153613 LPCAT4 1 2.47 0.63 30 4.21 90.08 21 5.09 No 46 1 Yes 0 0 No -20 0.55 No 50 65.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 34655934 - NM_153613 LPCAT4 1 1.41 0.64 30 -8.11 0 28 7.21 Yes 15 2.1 Yes 40 0.56 Yes -27 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 34656487 - NM_153613 LPCAT4 1 0.81 0.43 25 0.55 63.68 29 5.47 No 38 1.07 Yes 0 0 No -50 0.41 No 20 77.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 211927814 - NM_014873 LPGAT1 1 0.05 0.1 7 4.64 75.62 22 6.91 Yes 3 0.88 Yes 0 0 No -21 0.66 No 49 71.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 211940095 - NM_014873 LPGAT1 1 0.32 0.78 36 6.04 93.01 20 4.46 No 0 0.75 No 0 0 No -26 0.54 No 44 55.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 211952383 - NM_014873 LPGAT1 1 0.43 1.03 45 3.25 0 34 5.72 Yes 15 0.56 No 0 0 No -33 0.65 No 37 60.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 211952544 - NM_014873 LPGAT1 1 0.35 0.89 34 4.3 80.65 21 4.59 No 8 0.97 Yes 0 0 No -29 0.55 No 41 72.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 211969910 - NM_014873 LPGAT1 1 0.05 0.13 8 6.54 88.8 26 5.19 No 57 -3.99 No 0 0 No -23 0.83 Yes 47 70.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 211971859 - NM_014873 LPGAT1 1 0.28 0.63 30 5.8 80.84 20 5.56 Yes 7 0.51 No 0 0 No -19 0.81 Yes 51 89.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 11911116 + NM_001261428 LPIN1 1 0.94 0.94 37 2.16 75.64 68 9.4 Yes 20 1.42 Yes 0 0 No -32 0.7 Yes 18 60.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 11911501 + NM_001261428 LPIN1 1 0.15 0.14 10 -0.57 0 27 5.74 Yes 28 0.77 Yes 0 0 No -24 0.53 No 44 49.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 11924888 + NM_001261428 LPIN1 1 0.63 0.28 16 -7.96 0 49 4.8 No 27 0.98 Yes 0 0 No -39 0.38 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 11936133 + NM_001261428 LPIN1 1 0.14 0.1 7 10.77 98.23 29 7.2 Yes 16 1.46 Yes 0 0 No -28 0.77 Yes 42 92.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 11944553 + NM_001261428 LPIN1 1 0.41 0.26 15 -1.72 0 24 6.48 Yes 11 1.46 Yes 18 0.74 Yes -23 0.75 Yes 47 84.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 11945650 + NM_001261428 LPIN1 1 0.25 0.15 8 4.15 79.36 12 4.61 No -1 0.36 No 0 0 No -23 0.61 No 47 52.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 11959689 + NM_001261428 LPIN1 1 0.39 0.19 11 7.61 83.18 35 6.23 Yes 22 0.16 No 0 0 No -34 0.72 Yes 36 74.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2956199 - NM_014646 LPIN2 1 0.7 0.44 24 12.19 93.89 21 5.77 Yes 8 0.47 No 0 0 No -27 0.9 Yes 43 82.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 58297998 - NM_004811 LPXN 1 0.81 4.69 72 11.16 95.2 29 5.48 No 16 1.97 Yes 0 0 No -23 0.71 Yes 42 72.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 58307871 - NM_004811 LPXN 1 0.25 1.43 49 6.89 82.73 36 6.2 Yes 31 0.15 No 0 0 No -25 0.83 Yes 45 74.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 58317337 - NM_004811 LPXN 1 0.12 0.75 29 0.75 0 28 7.63 Yes 15 0.55 No 0 0 No -36 0.54 No 34 62.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 58317340 - NM_004811 LPXN 1 0.05 0.31 20 -10.25 0 25 7.46 Yes 12 0.54 No 0 0 No -33 0.47 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 58318354 - NM_004811 LPXN 1 0.24 0.99 45 0.33 66.72 33 6 Yes 33 0.35 No 0 0 No -32 0.8 Yes 38 83.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 58321783 - NM_004811 LPXN 1 0.01 0.11 7 3.17 83.14 51 6.09 Yes 38 0.72 No 0 0 No -33 0.95 Yes 37 95.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 58330264 - NM_004811 LPXN 1 0.03 0.26 18 7.64 91.89 23 5.06 No 42 -0.92 No 0 0 No -20 0.39 No 50 60.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 58330411 - NM_004811 LPXN 1 0.08 0.75 33 9.88 88.11 31 8.15 Yes 64 1.49 Yes 0 0 No -33 0.65 No 37 87.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 58331682 - NM_004811 LPXN 1 0.02 0.11 8 1.73 0 40 7.6 Yes 30 0.86 Yes 36 0.6 Yes -29 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 58335201 - NM_004811 LPXN 1 0.02 0.17 11 5.18 82.61 44 6.63 Yes 64 -3.5 No 0 0 No -23 0.65 No 40 61.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 58338806 - NM_004811 LPXN 1 0.04 0.28 17 3.01 0 35 3.63 No 57 0.63 No 0 0 No -38 0.26 No 40 42.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 58341883 - NM_004811 LPXN 1 0.02 0.14 9 10.22 89.47 29 5.51 No 45 0.83 Yes 0 0 No -28 0.88 Yes 42 67.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 151187594 - NM_001199282 LRBA 1 0.42 0.33 19 4.38 82.88 47 7.67 Yes 34 1.39 Yes 0 0 No -46 0.86 Yes 24 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 151203796 - NM_001199282 LRBA 1 2.69 2.26 64 5.25 81.93 35 8.25 Yes 22 1.16 Yes 0 0 No -34 0.6 No 36 62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 151242536 - NM_001199282 LRBA 1 21.6 21.64 72 3.96 74.61 100 9.18 Yes 35 0.65 No 29 0.42 Yes -47 0.91 Yes 23 94.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 151347724 - NM_001199282 LRBA 1 0.21 0.17 10 4.94 75.75 29 6.95 Yes 16 0.75 No 0 0 No -28 0.88 Yes 42 85.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 151358010 - NM_001199282 LRBA 1 0.15 0.15 9 -3.13 0 16 4 No 29 1.49 Yes 0 0 No -45 0.65 No 25 91.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 151360250 - NM_001199282 LRBA 1 0.22 0.18 8 7.5 79.55 45 7.4 Yes 68 1.1 Yes 0 0 No -39 0.49 No 26 71.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 151512006 - NM_001199282 LRBA 1 0.18 0.18 8 3.21 0 14 3.87 No 24 1.23 Yes 0 0 No -36 0.74 Yes 34 59.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 151518268 - NM_001199282 LRBA 1 6.73 7.08 71 6.87 75.81 28 4.82 No 4 0.61 No 27 0.84 Yes -27 0.62 No 43 85.91 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 151564303 - NM_001199282 LRBA 1 0.18 0.15 10 8.03 86.09 27 5.24 No 52 1.54 Yes 0 0 No -29 0.84 Yes 41 86.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 151604893 - NM_001199282 LRBA 1 0.27 0.43 21 7.09 78.45 26 5.49 No 1 0.51 No 27 0.83 Yes -25 0.78 Yes 45 80.45 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 151703762 - NM_001199282 LRBA 1 0.15 0.18 12 3.68 72.97 53 5.12 No 14 0.29 No 0 0 No -26 0.61 No 44 68.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 151727549 - NM_001199282 LRBA 1 0.11 0.15 10 1.74 0 11 4.12 No 16 0.85 Yes 0 0 No -24 0.53 No 46 62.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 151734283 - NM_001199282 LRBA 1 0.31 0.47 25 7.89 96.06 27 5.39 No 19 -1.65 No 0 0 No -26 0.63 No 44 64.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 151734303 - NM_001199282 LRBA 1 0.15 0.22 12 1.52 0 73 8.49 Yes 64 1.17 Yes 0 0 No -62 0.21 No 13 9.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 151753126 - NM_001199282 LRBA 1 0.31 0.33 22 -4.51 85.56 31 9.37 Yes 39 0.85 Yes 0 0 No -27 0.55 No 43 52.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 151762206 - NM_001199282 LRBA 1 0.31 0.32 19 11.6 91.91 35 5.48 No 25 -1.72 No 26 0.23 Yes -20 0.32 No 50 42.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 151770937 - NM_001199282 LRBA 1 0.68 0.81 40 3.83 87.36 20 4.8 No 41 0.4 No 0 0 No -19 0.34 No 48 47.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 151789013 - NM_001199282 LRBA 1 0.25 0.24 15 -11.06 66.56 30 5.66 Yes 17 0.49 No 0 0 No -25 0.75 Yes 45 67.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 151789414 - NM_001199282 LRBA 1 0.09 0.15 10 5.45 74.77 31 6.4 Yes 68 0.56 No 0 0 No -30 0.7 Yes 40 72.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 151817632 - NM_001199282 LRBA 1 0.67 1.08 43 -1.95 57.33 55 8.14 Yes 51 0.9 Yes 25 0.64 Yes -37 0.45 No 16 49.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 151822440 - NM_001199282 LRBA 1 0.11 0.18 10 2.56 0 28 6.25 Yes 15 0.53 No 0 0 No -31 0.67 Yes 39 90.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 151822790 - NM_001199282 LRBA 1 0.09 0.14 7 8.67 98.88 16 4.31 No 26 1.52 Yes 0 0 No -26 0.92 Yes 44 87.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 151839075 - NM_001199282 LRBA 1 0.14 0.18 12 3.65 0 35 7.07 Yes 22 2.2 Yes 0 0 No -34 0.89 Yes 36 94.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 151852911 - NM_001199282 LRBA 1 0.14 0.14 8 7.47 87.64 19 5.56 Yes 6 1.59 Yes 0 0 No -29 0.45 No 45 62.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 151864539 - NM_001199282 LRBA 1 0.11 0.11 7 7.49 84.75 26 4.85 No 75 -2.02 No 0 0 No -25 0.91 Yes 45 86.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 151933545 - NM_001199282 LRBA 1 0.12 0.14 8 3.62 73.51 34 5.52 No 6 0.4 No 0 0 No -29 0.28 No 42 50.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 47149397 + NM_015116 LRCH1 1 0.26 0.19 11 8.66 91.46 23 5.11 No 1 0.7 No 0 0 No -22 0.6 No 48 61.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 47233518 + NM_015116 LRCH1 1 0.07 0.1 7 1.19 0 26 7.55 Yes 13 1.24 Yes 0 0 No -25 0.93 Yes 45 94.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 47254278 + NM_015116 LRCH1 1 0.16 0.19 13 4.55 78.49 24 4.91 No 11 1.03 Yes 0 0 No -23 0.96 Yes 47 96.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 47263271 + NM_015116 LRCH1 1 0.24 0.21 13 -7.46 0 53 8.21 Yes 64 0.91 Yes 0 0 No -27 0.46 No 18 37.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 47289694 + NM_015116 LRCH1 1 0.3 0.44 22 9.18 85.14 76 8.59 Yes 63 0.42 No 24 0.43 Yes -24 0.39 No 45 57.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 47289741 + NM_015116 LRCH1 1 0.22 0.33 18 4.14 75.63 37 7.07 Yes 24 1.43 Yes 0 0 No -36 0.95 Yes 34 96.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 47301682 + NM_015116 LRCH1 1 0.18 0.22 15 5.83 90.44 27 5.2 No 32 0.62 No 0 0 No -26 0.69 Yes 44 49.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 47302072 + NM_015116 LRCH1 1 0.42 0.46 26 4.58 84.41 48 7.21 Yes 35 1 Yes 0 0 No -47 0.59 No 33 67.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 197531505 + NM_032773 LRCH3 1 0.28 0.21 12 6.06 79.58 21 6.48 Yes 75 1.48 Yes 0 0 No -20 0.82 Yes 50 82.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 197544345 + NM_032773 LRCH3 1 0.07 0.13 7 7.21 83.78 27 6.48 Yes 1 1.03 Yes 0 0 No -26 0.7 Yes 44 52.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 197556834 + NM_032773 LRCH3 1 0.6 0.86 42 5.65 74.38 29 5.66 Yes 46 0.69 No 0 0 No -28 0.71 Yes 42 78.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 197558810 + NM_032773 LRCH3 1 0.18 0.19 11 10.14 85.54 16 5.04 No 70 0.24 No 0 0 No -28 0.57 No 42 66.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 197558830 + NM_032773 LRCH3 1 0.41 0.43 23 5.69 87.77 27 5.39 No 57 -1.15 No 0 0 No -26 0.56 No 44 45.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 197582321 + NM_032773 LRCH3 1 7.71 4.68 71 6.88 86.98 30 7.67 Yes 17 0.94 Yes 0 0 No -29 0.9 Yes 41 97.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 197593023 + NM_032773 LRCH3 1 0.37 0.53 28 5.69 81.62 39 5.65 Yes 35 1.05 Yes 0 0 No -38 0.41 No 32 75.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 100174395 - NM_002319 LRCH4 1 0.25 0.19 11 -4.91 0 9 3.87 No 32 1.9 Yes 0 0 No -44 0.97 Yes 26 95.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100174964 - NM_002319 LRCH4 1 0.68 0.33 19 4.52 73.64 17 5.74 Yes 39 -2.66 No 0 0 No -26 0.47 No 44 30.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100175205 - NM_002319 LRCH4 1 1.68 1.33 52 -0.62 0 16 4.58 No 67 -0.69 No 25 0.91 Yes -16 0.33 No 54 34.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 100175940 - NM_002319 LRCH4 1 0.36 0.26 13 7.77 90.88 24 5.48 No 30 1.16 Yes 0 0 No -19 0.34 No 47 58.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 100176089 - NM_002319 LRCH4 1 1.23 1.14 46 5.46 85.55 17 4.69 No 25 0.39 No 0 0 No -24 0.84 Yes 46 91.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 100176347 - NM_002319 LRCH4 1 0.11 0.14 10 3.79 73.77 22 8.37 Yes 9 0.32 No 25 0.32 Yes -21 0.71 Yes 49 66.89 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 111491019 - NM_018372 LRIF1 1 7.93 7.71 72 1.31 72.48 44 7.35 Yes 31 1.49 Yes 0 0 No -44 0.54 No 27 76.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 111495430 - NM_018372 LRIF1 1 7.95 2.92 68 2.99 0 12 4.1 No 10 0.81 Yes 0 0 No -30 0.66 No 44 59.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 66437189 - NM_015541 LRIG1 1 0.32 0.21 9 8.19 86.67 29 3.92 No 1 1.26 Yes 0 0 No -28 0.91 Yes 42 87.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 66457565 - NM_015541 LRIG1 1 0.35 0.1 7 9.07 91.36 27 5.34 No 50 0.63 No 0 0 No -26 0.81 Yes 44 80.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 113631884 + NM_014813 LRIG2 1 1.08 0.1 7 1.75 0 21 4.58 No 36 1.26 Yes 0 0 No -20 0.62 No 50 69.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 113634650 + NM_014813 LRIG2 1 7.02 1.32 45 7.89 94.91 35 4.7 No 22 1.16 Yes 0 0 No -28 0.9 Yes 42 91.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 113639967 + NM_014813 LRIG2 1 2.4 0.72 32 3.94 78.55 25 5.1 No 62 -4.61 No 0 0 No -24 0.55 No 46 56.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 113641647 + NM_014813 LRIG2 1 0.83 0.17 9 6.61 81.31 22 6.85 Yes 52 1.47 Yes 0 0 No -21 0.93 Yes 49 93.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 113646230 + NM_014813 LRIG2 1 75.88 7.13 72 5.67 91.32 17 4.56 No 43 1.42 Yes 24 0.84 Yes -20 0.65 No 46 72.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 25211595 + NM_006152 LRMP 1 0.13 0.25 14 9.22 93.06 29 5.76 Yes 13 0.61 No 0 0 No -28 0.86 Yes 42 79.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 25214525 + NM_006152 LRMP 1 71.72 146.1 72 6.76 81.73 32 3.4 No 2 0.04 No 25 0.82 Yes -25 0.88 Yes 45 83.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 25216656 + NM_006152 LRMP 1 0.35 1.38 50 -0.66 76.57 27 6.48 Yes 14 1.4 Yes 23 0.93 Yes -26 0.84 Yes 44 93.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 25216543 + NM_006152 LRMP 1 0.03 0.11 8 10.17 89.7 35 6.19 Yes 22 0.71 No 0 0 No -34 0.7 Yes 45 80.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 25216656 + NM_006152 LRMP 1 16.79 63.14 72 -0.66 76.57 27 6.48 Yes 14 1.4 Yes 23 0.93 Yes -26 0.84 Yes 44 93.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 25216659 + NM_006152 LRMP 1 0.06 0.19 13 -3.82 0 9 3.87 No 17 1.41 Yes 0 0 No -29 0.85 Yes 41 92.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 25221089 + NM_006152 LRMP 1 1.25 5.24 70 8.44 90.86 19 5.73 Yes 74 1.53 Yes 0 0 No -18 0.65 No 47 58.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 25221089 + NM_006152 LRMP 1 1.71 7.4 71 8.44 90.86 19 5.73 Yes 74 1.53 Yes 0 0 No -18 0.65 No 47 58.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 25223261 + NM_006152 LRMP 1 0.07 0.25 15 9.36 84.31 21 6.24 Yes 8 1.76 Yes 0 0 No -20 0.88 Yes 50 88.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 25223639 + NM_006152 LRMP 1 0.04 0.22 10 1.92 80.73 24 7.04 Yes 11 1.66 Yes 0 0 No -23 0.8 Yes 47 75.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 25225109 + NM_006152 LRMP 1 0.04 0.14 9 6.46 86.15 28 5.38 No 57 -2.57 No 0 0 No -27 0.79 Yes 43 76.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 25225257 + NM_006152 LRMP 1 0.03 0.11 7 9.98 80.51 25 5.48 No 12 0.92 Yes 0 0 No -24 0.68 Yes 46 84.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 25228641 + NM_006152 LRMP 1 0.1 0.43 22 4.93 80.28 42 6.44 Yes 36 -1.89 No 28 0.46 Yes -31 0.72 Yes 39 73.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 25229456 + NM_006152 LRMP 1 0.62 2.38 60 4.84 85.3 22 5 No 9 0.73 No 0 0 No -21 0.77 Yes 49 94.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 25232180 + NM_006152 LRMP 1 0.2 0.82 34 -8.87 78 28 8.58 Yes 20 1.17 Yes 0 0 No -27 0.81 Yes 43 89.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 25232558 + NM_006152 LRMP 1 0.11 0.6 29 2.66 71.21 31 6.19 Yes 19 -2.88 No 24 0.66 Yes -30 0.32 No 45 46.74 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 25232635 + NM_006152 LRMP 1 3.89 21.14 72 6.17 78.56 27 6.55 Yes -2 0.62 No 26 0.88 Yes -26 0.88 Yes 44 79.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 25234148 + NM_006152 LRMP 1 0.15 0.69 34 0.09 74.68 76 9.02 Yes 4 0.41 No 0 0 No -16 0.57 No 54 72.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 25235708 + NM_006152 LRMP 1 0.14 0.56 34 6.73 81.88 33 8.35 Yes 60 1.34 Yes 0 0 No -28 0.6 No 42 55.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 25242994 + NM_006152 LRMP 1 0.25 0.67 27 -3.66 0 58 8.94 Yes 45 2.01 Yes 0 0 No -28 0.5 No 13 74.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 25243749 + NM_006152 LRMP 1 0.01 0.11 8 5.93 91.82 33 6.31 Yes 24 0.41 No 32 0.87 Yes -32 0.88 Yes 38 89.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 25254116 + NM_006152 LRMP 1 0.06 0.38 16 -2.53 0 32 7.09 Yes 54 0.66 No 0 0 No -37 0.77 Yes 33 70.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 25257351 + NM_006152 LRMP 1 0.06 0.44 23 3.3 70.4 32 5.86 Yes 60 0.55 No 0 0 No -18 0.48 No 52 60.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 25257671 + NM_006152 LRMP 1 1.21 7.54 70 10.41 97.82 18 5.08 No 5 0.23 No 0 0 No -23 0.77 Yes 47 72.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 25260851 + NM_006152 LRMP 1 0.16 0.82 35 5.77 84.53 46 6.97 Yes 33 0.82 Yes 0 0 No -20 0.32 No 50 66.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 23344539 + NM_014045 LRP10 1 0.68 1.54 57 6.46 79.79 21 5.2 No 51 -3.79 No 28 0.91 Yes -20 0.88 Yes 50 77.66 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23346184 + NM_014045 LRP10 1 0.8 2.6 60 11.58 88.29 32 5.99 Yes 52 1.66 Yes 0 0 No -31 0.73 Yes 39 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 105540284 - NM_013437 LRP12 1 1.08 0.18 9 2.44 76.5 30 6.65 Yes 55 0.52 No 0 0 No -29 0.43 No 41 50.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 68131288 + NM_001291902 LRP5 1 0.99 0.18 8 1.53 77.99 50 7.15 Yes 37 2.07 Yes 0 0 No -31 0.86 Yes 39 70.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68142698 + NM_001291902 LRP5 1 8.77 1.53 53 11.53 82.12 34 10.58 Yes 21 2.58 Yes 0 0 No -33 0.93 Yes 37 92.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68197045 + NM_001291902 LRP5 1 0.69 0.19 11 4.86 82.32 34 6.78 Yes 21 2.47 Yes 0 0 No -33 0.94 Yes 37 92.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68213040 + NM_001291902 LRP5 1 5.84 0.79 33 11.12 89.66 27 5.46 No 14 1.49 Yes 26 0.94 Yes -26 0.87 Yes 44 93.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 12284857 - NM_002336 LRP6 1 0.49 0.13 7 4.05 81.18 28 5.81 Yes 72 0.99 Yes 27 0.57 Yes -27 0.47 No 47 56.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 12284969 - NM_002336 LRP6 1 0.91 0.18 10 3.62 84.56 32 4.23 No 58 1.49 Yes 0 0 No -31 0.82 Yes 39 81.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 12355474 - NM_002336 LRP6 1 6.58 1.32 48 6.83 79.13 16 5.11 No 34 0.34 No 0 0 No -27 0.58 No 47 67.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 53714264 - NM_004631 LRP8 1 4.06 0.53 27 10.45 82.94 24 5.86 Yes 11 1.02 Yes 0 0 No -23 0.55 No 47 41.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 53714264 - NM_004631 LRP8 1 1.11 0.13 8 10.45 82.94 24 5.86 Yes 11 1.02 Yes 0 0 No -23 0.55 No 47 41.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 53715113 - NM_004631 LRP8 1 2.85 0.44 27 -3.04 52.95 33 5.92 Yes 20 0.53 No 0 0 No -32 0.93 Yes 38 80.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 53715533 - NM_004631 LRP8 1 0.78 0.18 9 4.95 82.57 27 6.92 Yes 14 1.14 Yes 0 0 No -26 0.82 Yes 44 91.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 53718210 - NM_004631 LRP8 1 2.29 0.97 34 10.47 84.5 29 8.2 Yes 16 0.95 Yes 0 0 No -31 0.51 No 39 71.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 53723747 - NM_004631 LRP8 1 4.87 1.74 56 3.03 79.54 18 6.85 Yes 74 0.52 No 28 0.54 Yes -28 0.36 No 42 46.48 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 53724073 - NM_004631 LRP8 1 0.29 0.1 7 10.64 85.7 39 6.31 Yes 26 0.94 Yes 0 0 No -23 0.54 No 32 56.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 53737088 - NM_004631 LRP8 1 0.64 0.22 11 8.75 85.65 21 5.2 No 8 1.07 Yes 0 0 No -25 0.71 Yes 50 70.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 53740493 - NM_004631 LRP8 1 2.35 0.65 30 7.28 73.27 36 6.32 Yes 23 0.97 Yes 35 0.9 Yes -35 0.96 Yes 35 97.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 53744117 - NM_004631 LRP8 1 3.23 0.26 14 5.96 89.48 29 6.6 Yes 71 0.62 No 0 0 No -28 0.56 No 42 64.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 53747783 - NM_004631 LRP8 1 0.52 0.13 8 6.27 84.03 43 7.11 Yes 59 1.63 Yes 0 0 No -42 0.94 Yes 28 96.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 53779416 - NM_004631 LRP8 1 1.25 0.28 14 11.84 93.59 32 5.65 Yes 71 1.72 Yes 0 0 No -28 0.48 No 42 54.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 53781372 - NM_004631 LRP8 1 0.69 0.15 10 6.32 75.28 14 5.35 No 1 0.08 No 0 0 No -22 0.55 No 48 80 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 53787313 - NM_004631 LRP8 1 2.63 0.68 31 8.53 86.6 28 5.83 Yes 74 0.74 No 0 0 No -27 0.84 Yes 43 90.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 53791210 - NM_004631 LRP8 1 0.97 0.25 14 7.79 78.87 26 5.66 Yes 30 1.68 Yes 0 0 No -25 0.63 No 45 72.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 3515778 - NR_110005 LRPAP1 1 0.1 0.15 10 6.45 82.12 25 5.57 Yes 24 -2.19 No 0 0 No -24 0.64 No 49 69.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 3516653 - NR_110005 LRPAP1 1 0.06 0.15 10 -9.56 79.88 26 6.56 Yes 13 1.15 Yes 0 0 No -25 0.95 Yes 45 88.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 3518408 - NR_110005 LRPAP1 1 0.05 0.13 7 6.89 90.39 34 6.08 Yes 50 1.35 Yes 0 0 No -33 0.57 No 40 73.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 3521957 - NR_110005 LRPAP1 1 0.04 0.11 7 9.31 92.88 15 6.16 Yes 2 1.17 Yes 31 0.17 Yes -36 0.68 Yes 34 55.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 3522072 - NR_110005 LRPAP1 1 0.05 0.11 8 10.69 88.83 20 6.53 Yes 40 0.24 No 0 0 No -29 0.66 Yes 41 65.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 44117010 - NM_133259 LRPPRC 1 0.06 0.38 20 1.86 0 14 3.86 No 68 1 Yes 0 0 No -33 0.59 No 41 69.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 44117414 - NM_133259 LRPPRC 1 0.02 0.14 8 7.51 79.22 22 6.4 Yes 9 0.93 Yes 0 0 No -28 0.62 No 42 68.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 44117502 - NM_133259 LRPPRC 1 0.1 0.6 27 5.57 79.48 35 6.78 Yes 22 1.44 Yes 34 0.85 Yes -34 0.76 Yes 36 90.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 44122706 - NM_133259 LRPPRC 1 0.1 0.5 23 12.51 93.74 23 6.37 Yes 50 1.17 Yes 0 0 No -22 0.63 No 48 61.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 44123631 - NM_133259 LRPPRC 1 0.03 0.18 10 9.62 80.37 25 5.48 No 63 0.18 No 0 0 No -24 0.88 Yes 46 86.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 44123684 - NM_133259 LRPPRC 1 0.27 1.46 48 4.79 88.39 23 4.59 No 46 0.35 No 0 0 No -22 0.89 Yes 48 88.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 44123795 - NM_133259 LRPPRC 1 0.08 0.54 26 10.79 85.99 35 7.74 Yes 22 1.22 Yes 0 0 No -33 0.72 Yes 36 62.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 44123846 - NM_133259 LRPPRC 1 0.02 0.14 9 -2.18 82.09 23 4.07 No 6 1.09 Yes 0 0 No -26 0.9 Yes 44 95.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44126742 - NM_133259 LRPPRC 1 0.03 0.15 11 -7.58 0 24 5.75 Yes 11 0.59 No 29 0.57 Yes -27 0.67 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 44127723 - NM_133259 LRPPRC 1 0.03 0.14 9 6.64 77.86 47 6.83 Yes 11 0.72 No 0 0 No -23 0.9 Yes 47 85.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 44128662 - NM_133259 LRPPRC 1 0.02 0.11 7 3.12 84.47 34 5.9 Yes 66 -4.03 No 0 0 No -34 0.46 No 36 43.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 44145291 - NM_133259 LRPPRC 1 0.29 1.96 59 6.45 93.74 20 4.8 No 68 0.93 Yes 22 0.94 Yes -19 0.51 No 51 59.67 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 44146608 - NM_133259 LRPPRC 1 0.06 0.21 10 3.7 81 24 5.2 No 33 -3.76 No 0 0 No -23 0.87 Yes 47 83.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 44169943 - NM_133259 LRPPRC 1 2.23 9.24 71 3.85 0 15 4.36 No 16 0.77 Yes 0 0 No -28 0.85 Yes 42 94.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44169955 - NM_133259 LRPPRC 1 0.1 0.42 22 0.4 0 17 4.36 No 4 0.83 Yes 0 0 No -16 0.76 Yes 54 89.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44172901 - NM_133259 LRPPRC 1 0.04 0.33 18 6.79 89.98 21 5.55 No 60 1.61 Yes 0 0 No -24 0.5 No 40 56.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 44173382 - NM_133259 LRPPRC 1 0.01 0.1 7 -11.15 0 36 8.58 Yes 23 1.51 Yes 0 0 No -35 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 44174509 - NM_133259 LRPPRC 1 0.13 0.81 38 -10.78 0 36 6.48 Yes 51 0.15 No 0 0 No -35 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 44175655 - NM_133259 LRPPRC 1 1.15 5.93 71 1.04 77.57 41 6.48 Yes 28 0.64 No 0 0 No -40 0.46 No 35 55.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 44175688 - NM_133259 LRPPRC 1 0.05 0.29 11 1.68 68.44 25 4.2 No 47 0.53 No 27 0.64 Yes -24 0.5 No 48 52.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 44186360 - NM_133259 LRPPRC 1 0.26 1.07 41 5.38 73.95 31 6.42 Yes 18 0.74 No 30 0.83 Yes -30 0.81 Yes 40 78.64 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 44200842 - NM_133259 LRPPRC 1 0.04 0.18 11 -2.88 0 15 4.58 No 23 0.83 Yes 0 0 No -35 0.67 Yes 35 82.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44204180 - NM_133259 LRPPRC 1 0.03 0.22 13 -4.54 0 17 4.56 No 21 0.94 Yes 0 0 No -33 0.6 No 37 67.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 44207079 - NM_133259 LRPPRC 1 0.17 0.75 41 -1.79 0 14 4.24 No 12 1.81 Yes 0 0 No -38 0.64 No 32 70.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 44222216 - NM_133259 LRPPRC 1 0.05 0.18 11 4.08 84.24 17 5.39 No 4 1.78 Yes 0 0 No -22 0.49 No 54 65.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50070269 + NR_037793 LRR1 1 0.42 0.19 11 4.74 84.41 49 6.88 Yes 36 1.94 Yes 29 0.04 Yes -45 0.67 Yes 16 64.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 50070269 + NR_037793 LRR1 1 29.5 15.35 72 4.74 84.41 49 6.88 Yes 36 1.94 Yes 29 0.04 Yes -45 0.67 Yes 16 64.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 50073395 + NR_037793 LRR1 1 0.34 0.17 12 11.67 94.18 32 6.06 Yes 19 0.84 Yes 0 0 No -31 0.79 Yes 39 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50074673 + NR_037793 LRR1 1 0.2 0.13 9 5.62 89.14 26 6.44 Yes 10 0.79 Yes 0 0 No -25 0.78 Yes 45 90.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50079189 + NR_037793 LRR1 1 0.47 0.46 24 9.31 80.57 26 6.32 Yes 13 1.31 Yes 25 0.86 Yes -25 0.91 Yes 45 88.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 53730545 + NM_018214 LRRC1 1 0.51 0.11 7 2.82 0 31 5.28 No 18 1.66 Yes 0 0 No -26 0.8 Yes 44 65.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 53748748 + NM_018214 LRRC1 1 2.91 0.78 39 9.82 93.59 12 6.16 Yes 75 1.55 Yes 31 0.32 Yes -35 0.56 No 35 64.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 53762086 + NM_018214 LRRC1 1 1.46 0.39 21 2.98 0 27 7.7 Yes 14 1.77 Yes 28 0.89 Yes -32 0.48 No 43 66.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 53770246 + NM_018214 LRRC1 1 0.64 0.19 11 4.81 92.01 27 4.5 No 8 1.27 Yes 0 0 No -20 0.62 No 50 75.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 53784069 + NM_018214 LRRC1 1 1.03 0.18 13 0.32 78.21 55 9.16 Yes 42 1.7 Yes 0 0 No -55 0.73 Yes 15 82.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 53785790 + NM_018214 LRRC1 1 4.15 0.89 38 2.45 0 37 7.6 Yes 24 1.3 Yes 0 0 No -36 0.96 Yes 34 97.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145745625 + NM_001272036 LRRC14 1 2.76 1.15 47 -4.05 0 24 8.05 Yes 11 1.34 Yes 19 0.87 Yes -23 0.94 Yes 47 95.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 72061471 - NM_001278213 LRRC20 1 0.6 0.13 9 7.4 87.64 16 5.07 No 20 0.89 Yes 0 0 No -24 0.49 No 50 71.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 99819826 + NR_135754 LRRC28 1 1.16 0.85 34 8.27 93.14 61 7.69 Yes 48 2.19 Yes 0 0 No -23 0.77 Yes 47 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 99825972 + NR_135754 LRRC28 1 0.38 0.22 14 9.79 88.25 16 6.42 Yes 3 1.29 Yes 29 0.73 Yes -29 0.73 Yes 41 79.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 99877785 + NR_135754 LRRC28 1 0.55 0.35 23 9.2 88.37 26 5 No 32 -1.37 No 0 0 No -23 0.78 Yes 45 70.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 99893865 + NR_135754 LRRC28 1 3.67 1.63 56 4.21 92.14 21 4.8 No 8 0.57 No 20 0.84 Yes -20 0.84 Yes 50 79.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 99895610 + NR_135754 LRRC28 1 10.42 4.75 70 7.58 85.04 46 6.9 Yes 43 0.07 No 18 0.29 Yes -37 0.82 Yes 33 83.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 99900422 + NR_135754 LRRC28 1 0.95 0.49 25 4.49 92.42 23 4.65 No 16 -0.28 No 23 0.46 Yes -23 0.4 No 48 38.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 99924793 + NR_135754 LRRC28 1 1.24 0.39 19 9.39 93.87 22 5.29 No 9 1.44 Yes 0 0 No -21 0.64 No 49 83.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 70613807 - NM_017768 LRRC40 1 0.43 0.46 18 6.74 72.14 44 6.71 Yes 45 1.46 Yes 0 0 No -38 0.75 Yes 32 92.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 70614296 - NM_017768 LRRC40 1 0.51 0.76 34 -1.6 61.49 24 4.55 No 53 -2.9 No 0 0 No -23 0.93 Yes 47 93.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 70616894 - NM_017768 LRRC40 1 1.09 0.6 9 0.39 0 95 8.96 Yes 10 0.86 Yes 27 0.57 Yes -32 0.45 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 70622995 - NM_017768 LRRC40 1 0.45 0.47 25 0.12 67.5 21 4.57 No 17 0.59 No 0 0 No -20 0.61 No 50 44.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 70623010 - NM_017768 LRRC40 1 0.13 0.14 10 4.15 66.66 15 6.31 Yes 2 0.57 No 0 0 No -19 0.3 No 34 45.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 70639346 - NM_017768 LRRC40 1 0.21 0.14 8 1.94 75.42 36 5.98 Yes 69 0.82 Yes 0 0 No -35 0.73 Yes 35 78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 70644686 - NM_017768 LRRC40 1 0.09 0.13 7 -1.64 0 37 7.14 Yes 24 1.48 Yes 0 0 No -36 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 70649074 - NM_017768 LRRC40 1 0.16 0.22 14 5.98 81.52 50 6.99 Yes 37 0.81 Yes 0 0 No -33 0.54 No 37 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 70653020 - NM_017768 LRRC40 1 0.14 0.19 12 -13.13 0 27 6.04 Yes 14 1.28 Yes 0 0 No -26 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 46762742 - NM_006369 LRRC41 1 0.09 0.19 11 -1.14 0 18 5.96 Yes 5 0.11 No 0 0 No -17 0.58 No 53 46.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46762747 - NM_006369 LRRC41 1 0.12 0.24 13 -0.65 62.34 13 5.5 No 0 0.43 No 0 0 No -26 0.63 No 44 42.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 54413534 + NM_001256409 LRRC42 1 9.82 3.78 70 9.32 87.62 28 6.21 Yes 15 0.92 Yes 27 0.87 Yes -27 0.82 Yes 43 77.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 54427663 + NM_001256409 LRRC42 1 0.13 0.1 7 6.36 82.63 29 5.57 Yes 16 1.17 Yes 30 0.77 Yes -28 0.77 Yes 42 79.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79983242 + NM_144999 LRRC45 1 0.5 0.14 10 4.95 84.34 27 5.74 Yes 74 -1.65 No 19 0.9 Yes -28 0.81 Yes 44 40.05 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 79983315 + NM_144999 LRRC45 1 0.72 0.25 13 5.83 78.97 18 7.83 Yes 34 1.27 Yes 0 0 No -17 0.83 Yes 53 85.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79986894 + NM_144999 LRRC45 1 2.42 0.4 21 4.06 88.01 21 4.9 No 41 0.36 No 20 0.91 Yes -20 0.93 Yes 50 94.91 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 3697918 - NM_020710 LRRC47 1 0.13 0.26 12 -2.43 0 18 4.24 No 12 0.89 Yes 22 0.89 Yes -40 0.7 Yes 30 59.68 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 3700406 - NM_020710 LRRC47 1 0.18 0.22 11 5.19 83.54 24 5 No 60 -3.15 No 0 0 No -24 0.65 No 46 49.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 3700476 - NM_020710 LRRC47 1 0.38 0.47 26 4.11 90.58 21 4.79 No 8 0.41 No 20 0.93 Yes -20 0.76 Yes 50 74.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 541539 + NM_198075 LRRC56 1 4.78 0.18 11 4.35 84.86 25 6.16 Yes 12 0.78 Yes 0 0 No -24 0.91 Yes 46 85.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 545360 + NM_198075 LRRC56 1 3.14 0.18 11 3.95 74.72 45 6.79 Yes 61 -2.5 No 0 0 No -44 0.59 No 26 75.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 42837459 - NM_153260 LRRC57 1 0.16 0.1 7 -14.17 0 41 7.34 Yes 43 1.14 Yes 0 0 No -40 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 42840204 - NM_153260 LRRC57 1 0.24 0.17 9 3.53 72.26 30 6.3 Yes 17 1.01 Yes 0 0 No -37 0.59 No 41 64.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 120049538 - NM_001099678 LRRC58 1 0.5 0.67 29 4.58 71.32 33 6.75 Yes 20 1.87 Yes 0 0 No -32 0.88 Yes 38 91.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 120050144 - NM_001099678 LRRC58 1 1.14 1.28 48 9.75 87.76 25 5.29 No 29 1.69 Yes 0 0 No -24 0.96 Yes 46 98.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 120053536 - NM_001099678 LRRC58 1 0.36 0.4 22 10.77 77.01 42 5.99 Yes 53 0.72 No 0 0 No -27 0.51 No 44 61.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 120067162 - NM_001099678 LRRC58 1 2.34 2.25 64 6.57 79.83 27 6.35 Yes 14 2.13 Yes 0 0 No -26 0.83 Yes 44 88.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 48460942 - NM_018509 LRRC59 1 0.17 0.47 22 4.67 73.66 17 7.45 Yes 4 2.04 Yes 0 0 No -29 0.32 No 41 37.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 48462647 - NM_018509 LRRC59 1 0.04 0.15 10 -6.81 0 13 3.51 No 65 -2.56 No 0 0 No -30 0.62 No 40 73.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 48462651 - NM_018509 LRRC59 1 0.06 0.22 15 -2.79 82.49 27 5.99 Yes 61 -2.56 No 0 0 No -26 0.61 No 44 65.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 48469396 - NM_018509 LRRC59 1 0.1 0.26 15 8.07 83.82 18 5.38 No 5 1.09 Yes 0 0 No -22 0.92 Yes 48 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131649164 + NM_019594 LRRC8A 1 2.1 0.49 23 3.07 79.99 23 5 No 37 1.21 Yes 0 0 No -22 0.92 Yes 48 92.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131651464 + NM_019594 LRRC8A 1 1.22 0.25 15 9.64 90.75 26 6.68 Yes 13 1.06 Yes 0 0 No -25 0.8 Yes 45 84.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131654345 + NM_019594 LRRC8A 1 4.74 0.99 45 8.43 83.29 33 6.67 Yes 76 -2.63 No 0 0 No -32 0.62 No 38 69.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 90049207 + NM_001134476 LRRC8B 1 0.81 0.17 10 7.25 85.24 15 8.17 Yes 2 2.22 Yes 0 0 No -22 0.56 No 41 44.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 90133719 + NM_032270 LRRC8C 1 1.03 0.19 13 2.55 80.8 38 7.06 Yes 25 1.63 Yes 0 0 No -37 0.97 Yes 33 97.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 90171860 + NM_032270 LRRC8C 1 0.33 0.15 10 8.64 96.83 36 4.69 No 30 0.18 No 0 0 No -21 0.65 No 49 65.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 90309167 + NM_018103 LRRC8D 1 2.95 0.22 13 4.48 75.84 71 9.15 Yes 58 2.57 Yes 0 0 No -21 0.61 No 52 79.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 90312075 + NM_018103 LRRC8D 1 1.9 1.26 48 6.15 81.93 25 5.79 Yes 12 0.9 Yes 0 0 No -24 0.8 Yes 46 73.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 90334486 + NM_018103 LRRC8D 1 0.22 0.14 8 10.88 94.56 53 8.12 Yes 40 1.78 Yes 0 0 No -52 0.89 Yes 18 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 90356460 + NM_018103 LRRC8D 1 0.18 0.13 8 9.37 86.87 30 4.67 No 17 1.44 Yes 0 0 No -29 0.97 Yes 41 95.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 90390839 + NM_018103 LRRC8D 1 0.52 0.33 18 9.86 83.17 39 6.62 Yes 26 1.05 Yes 0 0 No -38 0.59 No 32 58.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 90395366 + NM_018103 LRRC8D 1 3.38 2.28 62 7.9 89.77 27 5.2 No 14 0.8 Yes 26 0.76 Yes -26 0.81 Yes 44 76.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 86021810 + NM_033402 LRRCC1 1 2.25 0.19 12 5.47 81.46 43 4 No 13 0.74 No 23 0.83 Yes -25 0.78 Yes 45 86.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 86025265 + NM_033402 LRRCC1 1 1.1 0.21 14 1.73 0 18 4.36 No 30 0.37 No 0 0 No -17 0.89 Yes 53 82.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 86026548 + NM_033402 LRRCC1 1 25.78 5.36 71 8.13 81.04 34 6.75 Yes 56 0.87 Yes 0 0 No -39 0.65 No 31 54.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 86027651 + NM_033402 LRRCC1 1 0.53 0.13 8 -18.02 58.76 19 3.93 No 27 -3.18 No 0 0 No -18 0.61 No 52 53.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 86044645 + NM_033402 LRRCC1 1 0.57 0.13 7 12.85 95.65 45 7.14 Yes 32 0.87 Yes 0 0 No -41 0.59 No 29 78.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 86047184 + NM_033402 LRRCC1 1 2.14 0.54 29 6.22 79.76 22 5.29 No 9 0.41 No 0 0 No -21 0.64 No 49 41.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 86054617 + NM_033402 LRRCC1 1 0.38 0.1 7 10.9 94.72 23 5.08 No 10 0.53 No 0 0 No -22 0.83 Yes 48 91.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 238657817 + NM_001137550 LRRFIP1 1 0.04 0.1 7 -3.43 67.69 12 4.8 No -1 0.17 No 26 0.67 Yes -10 0.33 No 59 34.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 238662591 + NM_001137550 LRRFIP1 1 0.09 0.32 17 7.55 87.63 53 8.84 Yes 13 -1.27 No 0 0 No -24 0.44 No 22 73.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 238684183 + NM_001137550 LRRFIP1 1 1.99 0.25 15 7.18 83.23 17 4.82 No 4 0.66 No 0 0 No -22 0.94 Yes 48 93.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37096654 - NM_006309 LRRFIP2 1 0.2 0.19 12 -7.27 78.4 28 5.72 Yes 28 1.16 Yes 0 0 No -23 0.69 Yes 47 83.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37116133 - NM_006309 LRRFIP2 1 8.43 0.42 24 2.97 81.38 15 3.96 No 58 0.35 No 0 0 No -23 0.9 Yes 47 79.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37184647 - NM_006309 LRRFIP2 1 0.1 0.11 8 5.31 86.33 21 5.8 Yes 48 -3.75 No 0 0 No -20 0.84 Yes 50 85.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37188119 - NM_006309 LRRFIP2 1 5.2 6.14 66 7.75 92.48 29 5.4 No 61 -4.08 No 0 0 No -22 0.29 No 48 31.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37188805 - NM_006309 LRRFIP2 1 0.12 0.15 9 8.61 84.86 38 6.72 Yes 44 0.52 No 0 0 No -21 0.5 No 46 59.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37195660 - NM_006309 LRRFIP2 1 0.29 0.24 12 3.93 0 34 7.61 Yes 21 0.91 Yes 0 0 No -33 0.93 Yes 37 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37196148 - NM_006309 LRRFIP2 1 7.91 6.17 71 6.53 79.02 23 5.31 No 10 0.34 No 26 0.82 Yes -26 0.94 Yes 44 96.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 37196216 - NM_006309 LRRFIP2 1 3.35 2.57 63 4.99 84.04 45 4.6 No 28 0.18 No 0 0 No -27 0.72 Yes 43 49.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37203640 - NM_006309 LRRFIP2 1 1.5 1.17 46 4.19 0 64 6.68 Yes 48 1.71 Yes 0 0 No -56 0.61 No 14 83.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37212558 - NM_006309 LRRFIP2 1 6.23 4.54 69 2.96 0 37 6.48 Yes 24 0.36 No 36 0.07 Yes -36 0.63 No 34 61.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 37212562 - NM_006309 LRRFIP2 1 0.5 0.39 20 0.57 78.13 33 6.16 Yes 20 0.37 No 36 0.07 Yes -32 0.64 No 38 61.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 37214515 - NM_006309 LRRFIP2 1 0.73 0.54 26 3.87 85.79 27 6.16 Yes 14 1.25 Yes 0 0 No -26 0.91 Yes 44 94.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37214518 - NM_006309 LRRFIP2 1 7.12 5.19 72 8.18 85.31 24 5.92 Yes 11 1.28 Yes 23 0.9 Yes -23 0.89 Yes 47 93.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 37214686 - NM_006309 LRRFIP2 1 3.37 2.56 60 11.7 92.63 29 3.93 No 6 1.01 Yes 0 0 No -23 0.35 No 52 63.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 101460235 + NM_024652 LRRK1 1 3.76 1.17 43 5.87 88.75 16 7.05 Yes 3 0.92 Yes 26 0.5 Yes -36 0.71 Yes 34 63.94 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 101460289 + NM_024652 LRRK1 1 0.6 0.15 8 1.22 66.03 30 6.54 Yes 57 0.9 Yes 0 0 No -30 0.82 Yes 40 74.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101460295 + NM_024652 LRRK1 1 0.36 0.13 7 -2.12 0 9 3.87 No 63 0.89 Yes 0 0 No -36 0.81 Yes 34 73.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101460311 + NM_024652 LRRK1 1 1.11 0.32 15 4.84 84.38 21 4.76 No NA NA NA 0 0 No -52 0.46 No 52 46.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 101462979 + NM_024652 LRRK1 1 5.54 1.74 60 8.55 91.62 33 6.71 Yes 20 1.51 Yes 0 0 No -32 0.94 Yes 38 95.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101465985 + NM_024652 LRRK1 1 0.42 0.32 16 9.65 81.92 42 8.49 Yes 29 0.34 No 0 0 No -28 0.5 No 42 62.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 101468436 + NM_024652 LRRK1 1 0.18 0.15 10 5.02 68.23 32 5.8 Yes 12 1.25 Yes 0 0 No -31 0.76 Yes 39 72.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101472235 + NM_024652 LRRK1 1 0.27 0.28 12 7.68 95.07 28 4.79 No 49 1.3 Yes 0 0 No -27 0.73 Yes 43 49.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 101482940 + NM_024652 LRRK1 1 3.85 2.88 66 4.34 73.67 65 7.93 Yes 52 0.18 No 0 0 No -23 0.52 No 12 77.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 101483927 + NM_024652 LRRK1 1 0.62 0.42 25 8.31 95.43 32 6.48 Yes 19 1 Yes 0 0 No -26 0.73 Yes 39 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101487829 + NM_024652 LRRK1 1 0.35 0.26 16 -3.23 73.63 32 6.16 Yes 19 0.81 Yes 0 0 No -31 0.79 Yes 39 81.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101497125 + NM_024652 LRRK1 1 0.31 0.22 11 7.83 83.22 30 5.59 Yes 75 1.22 Yes 0 0 No -29 0.91 Yes 41 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101505095 + NM_024652 LRRK1 1 0.67 0.47 28 8.37 81.31 39 4.93 No 26 0.79 Yes 0 0 No -24 0.82 Yes 46 83.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101526915 + NM_024652 LRRK1 1 0.47 0.35 18 11.2 94.52 23 5.74 Yes 10 1.15 Yes 0 0 No -22 0.53 No 48 70.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 101529711 + NM_024652 LRRK1 1 2.17 2.49 60 7.15 93.21 28 3.89 No 18 -3.15 No 0 0 No -24 0.4 No 46 37.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 101545231 + NM_024652 LRRK1 1 0.08 0.1 7 4.94 75.58 41 6.63 Yes 28 1.56 Yes 0 0 No -25 0.38 No 30 60.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 101547518 + NM_024652 LRRK1 1 0.34 0.38 22 4.3 71.72 50 7.93 Yes 37 1.7 Yes 0 0 No -49 0.53 No 21 67.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 101554544 + NM_024652 LRRK1 1 0.87 0.94 43 -0.27 0 10 4 No 52 1.99 Yes 0 0 No -54 0.76 Yes 16 76.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101555111 + NM_024652 LRRK1 1 0.19 0.19 13 8.79 85.31 29 6.54 Yes 16 1.9 Yes 0 0 No -28 0.95 Yes 42 95.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101556882 + NM_024652 LRRK1 1 1.01 0.72 35 5.52 87.43 16 5.46 No 3 0.77 Yes 0 0 No -15 0.55 No 55 78.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 101564905 + NM_024652 LRRK1 1 0.5 0.29 17 9.22 88.95 17 5.74 Yes 44 0.87 Yes 0 0 No -25 0.43 No 45 57.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 101565004 + NM_024652 LRRK1 1 3.56 1.93 60 1.28 75.81 53 6.1 Yes 40 1.1 Yes 33 0.7 Yes -33 0.76 Yes 37 55.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 101567356 + NM_024652 LRRK1 1 0.71 0.67 32 -8.07 75.88 26 6.16 Yes 13 0.95 Yes 0 0 No -29 0.81 Yes 41 87.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101597064 + NM_024652 LRRK1 1 4.26 2.42 63 3.12 0 27 6.48 Yes 14 1.14 Yes 0 0 No -26 0.85 Yes 44 90.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 101605349 + NM_024652 LRRK1 1 0.22 0.22 14 10.05 97.37 44 6.93 Yes 53 -0.47 No 21 0.55 Yes -21 0.67 Yes 49 85.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 101605662 + NM_024652 LRRK1 1 1.52 1.42 51 6.07 72.89 35 5.73 Yes -4 0.81 Yes 0 0 No -30 0.59 No 40 63.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 40620483 + NM_198578 LRRK2 1 0.18 0.18 12 8.57 76.41 44 7.77 Yes -2 0.55 No 0 0 No -33 0.65 No 37 55.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 40621692 + NM_198578 LRRK2 1 0.3 0.32 19 7.78 85.96 30 6.4 Yes 22 1.6 Yes 0 0 No -29 0.59 No 41 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 40634290 + NM_198578 LRRK2 1 0.06 0.1 7 1.8 0 16 3.83 No 61 0.62 No 0 0 No -34 0.87 Yes 36 86.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 40639311 + NM_198578 LRRK2 1 0.31 0.38 21 8.38 86.38 20 5.42 No 7 0.32 No 0 0 No -19 0.48 No 51 52.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 40645057 + NM_198578 LRRK2 1 1.72 0.94 34 2.74 75.82 22 5.26 No 9 0.7 No 0 0 No -57 0.26 No 14 58.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 40645806 + NM_198578 LRRK2 1 0.23 0.21 13 -1.26 81.23 18 4.69 No 5 1.49 Yes 0 0 No -26 0.91 Yes 44 91.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 40645808 + NM_198578 LRRK2 1 0.15 0.15 9 -3.59 83.14 20 4.85 No 7 1.48 Yes 0 0 No -28 0.86 Yes 42 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 40645849 + NM_198578 LRRK2 1 0.48 0.39 17 5.27 78.38 14 5.43 No 48 1.47 Yes 0 0 No -24 0.69 Yes 46 81.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 40651059 + NM_198578 LRRK2 1 0.28 0.31 18 0.71 0 13 4.36 No 10 -3.08 No 0 0 No -29 0.39 No 41 66.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 40651079 + NM_198578 LRRK2 1 0.11 0.13 7 3.34 72.52 28 5.38 No 30 -4.35 No 0 0 No -27 0.85 Yes 43 76.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 40668460 + NM_198578 LRRK2 1 2.04 1.11 36 3.01 68.67 35 4.69 No -3 0.84 Yes 0 0 No -34 0.58 No 36 65.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 40692168 + NM_198578 LRRK2 1 0.45 0.29 14 1.47 74.55 37 7.46 Yes 75 0.31 No 0 0 No -36 0.78 Yes 34 90.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 40692168 + NM_198578 LRRK2 1 0.86 0.68 28 1.47 74.55 37 7.46 Yes 75 0.31 No 0 0 No -36 0.78 Yes 34 90.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 40692230 + NM_198578 LRRK2 1 1.07 0.78 30 5.57 71.64 28 5.25 No 43 -4.9 No 21 0.7 Yes -27 0.77 Yes 43 48.02 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 40694614 + NM_198578 LRRK2 1 0.28 0.49 24 0.57 64.27 50 5.17 No 19 0.4 No 26 0.7 Yes -31 0.32 No 39 39.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 40699233 + NM_198578 LRRK2 1 0.67 0.65 26 5.1 80.91 27 5.48 No 14 0.82 Yes 0 0 No -26 0.91 Yes 44 90.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 40704635 + NM_198578 LRRK2 1 0.14 0.14 7 6.68 81.45 28 5.32 No -4 0.54 No 0 0 No -27 0.94 Yes 43 94.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 40710079 + NM_198578 LRRK2 1 1.27 1.04 45 3.33 70.97 24 5.3 No 11 0.71 No 0 0 No -23 0.73 Yes 47 54.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 40716964 + NM_198578 LRRK2 1 0.36 0.42 22 -11.28 76.13 44 8.1 Yes 31 0.44 No 0 0 No -27 0.66 No 43 78.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 40742187 + NM_198578 LRRK2 1 0.16 0.18 13 -1.39 0 15 4.12 No 15 1.06 Yes 25 0.68 Yes -27 0.53 No 43 77.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 40751619 + NM_198578 LRRK2 1 0.22 0.18 11 6.46 91.72 27 5.2 No 74 0.21 No 0 0 No -26 0.61 No 44 75.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 40756239 + NM_198578 LRRK2 1 0.39 0.31 16 7.13 78.8 38 6.08 Yes 56 0.86 Yes 0 0 No -30 0.77 Yes 40 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 40760811 + NM_198578 LRRK2 1 0.74 0.72 37 -5.27 0 37 4.81 No 13 0.48 No 0 0 No -25 0.75 Yes 45 91.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130214081 + NM_001190723 LRSAM1 1 0.43 0.1 7 6.14 71.35 24 5.48 No 67 0.18 No 0 0 No -28 0.58 No 47 77.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 130215757 + NM_001190723 LRSAM1 1 1.48 0.38 20 7.86 83.88 32 5.7 Yes 24 0.53 No 31 0.75 Yes -31 0.65 No 39 78.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 130216784 + NM_001190723 LRSAM1 1 0.64 0.17 9 -1.43 0 13 4.36 No 18 2.06 Yes 0 0 No -30 0.84 Yes 40 90.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130223155 + NM_001190723 LRSAM1 1 0.29 0.13 8 3.97 84.41 49 10.1 Yes 36 1.88 Yes 0 0 No -48 0.64 No 22 88.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 130223891 + NM_001190723 LRSAM1 1 0.72 0.31 16 5.95 84.36 21 4.9 No 76 0.9 Yes 0 0 No -20 0.88 Yes 50 85.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130241217 + NM_001190723 LRSAM1 1 3.3 0.96 40 5.44 0 30 7.87 Yes 17 1.52 Yes 0 0 No -29 0.89 Yes 41 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130241287 + NM_001190723 LRSAM1 1 0.37 0.14 9 7.55 83.07 19 5.21 No 6 0.89 Yes 0 0 No -29 0.82 Yes 41 62.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 130249773 + NM_001190723 LRSAM1 1 1.53 0.5 28 9.2 89.64 22 5.93 Yes 43 -0.21 No 22 0.8 Yes -22 0.58 No 48 71.97 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 130249815 + NM_001190723 LRSAM1 1 0.84 0.25 16 5.37 80.26 21 5.2 No 18 -1.85 No 0 0 No -20 0.88 Yes 50 88.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130258246 + NM_001190723 LRSAM1 1 0.57 0.1 7 -4.23 0 59 7.3 Yes 16 0.92 Yes 0 0 No -28 0.91 Yes 42 96.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130259700 + NM_001190723 LRSAM1 1 0.61 0.18 11 7.97 89.88 18 5.29 No 5 0.12 No 0 0 No -23 0.39 No 53 61.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71796456 + NM_001145309 LRTOMT 1 1.12 0.15 10 7.35 98.16 31 6.4 Yes 66 0.47 No 0 0 No -30 0.73 Yes 40 71.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 71799385 + NM_001145309 LRTOMT 1 11.27 1.32 55 7.65 81.28 46 5.04 No -3 0.63 No 29 0.76 Yes -26 0.88 Yes 44 85.06 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 102108111 + NM_152892 LRWD1 1 0.45 0.24 13 5.01 81.2 27 5.64 Yes 3 0.57 No 26 0.56 Yes -22 0.47 No 41 63.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 102113333 + NM_152892 LRWD1 1 1.43 0.94 46 -13.67 0 19 4.36 No 6 -1.15 No 24 0.7 Yes -40 0.52 No 33 32.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 194362974 - NM_018385 LSG1 1 0.37 0.49 23 -5.01 80.08 37 5.87 Yes 24 1.29 Yes 0 0 No -29 0.57 No 41 66.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 194368600 - NM_018385 LSG1 1 0.17 0.24 14 4.56 87.39 19 5 No 73 -5.39 No 0 0 No -18 0.43 No 52 43.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 194369475 - NM_018385 LSG1 1 0.08 0.11 7 -8.54 0 11 5.82 Yes -2 0.41 No 0 0 No -10 0.75 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 194369525 - NM_018385 LSG1 1 0.12 0.17 10 0.09 77.32 19 4.69 No 6 0.26 No 22 0.82 Yes -18 0.93 Yes 52 92.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 194371679 - NM_018385 LSG1 1 0.11 0.11 7 6.27 78.2 25 8.24 Yes 12 1.33 Yes 0 0 No -24 0.76 Yes 46 82.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 194373868 - NM_018385 LSG1 1 0.09 0.15 9 -5.34 0 27 5.74 Yes 14 1.35 Yes 21 0.46 Yes -26 0.49 No 44 81.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 194381616 - NM_018385 LSG1 1 0.36 0.35 19 11.32 91.62 31 5.66 Yes 60 -3.92 No 26 0.27 Yes -26 0.67 Yes 44 59.57 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 38028531 - NR_045493 LSM1 1 0.14 0.36 19 9.8 84.03 28 5.23 No 60 0.35 No 27 0.77 Yes -27 0.69 Yes 43 71.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 36859665 - NM_032881 LSM10 1 1.01 1.26 48 6.44 90.57 16 5 No 3 1.25 Yes 0 0 No -26 0.83 Yes 44 36.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 36859751 - NM_032881 LSM10 1 0.19 0.25 12 -4.73 0 27 5.39 No 68 -1.96 No 0 0 No -33 0.9 Yes 37 91.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36861370 - NM_032881 LSM10 1 0.59 0.71 33 3.01 0 33 6.63 Yes 62 -2.32 No 0 0 No -32 0.71 Yes 38 76.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36863038 - NM_032881 LSM10 1 0.11 0.14 8 7.87 83.43 21 5.74 Yes 38 1.76 Yes 0 0 No -26 0.69 Yes 41 68.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 42114388 - NM_152344 LSM12 1 0.29 0.38 19 3.06 66.46 29 6.32 Yes 16 0.95 Yes 0 0 No -28 0.86 Yes 42 85.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42114471 - NM_152344 LSM12 1 5.24 6.15 71 7.38 87.72 17 4.79 No 28 0.93 Yes 27 0.65 Yes -27 0.43 No 43 80.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 42115553 - NM_152344 LSM12 1 1.67 3 65 6.24 73.81 22 7.28 Yes 9 1.1 Yes 0 0 No -21 0.74 Yes 49 87.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42130121 - NM_152344 LSM12 1 0.07 0.14 9 -0.38 0 24 4.1 No 76 -3.71 No 0 0 No -28 0.75 Yes 42 61.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 42130125 - NM_152344 LSM12 1 0.12 0.25 14 4.11 83.39 20 3.92 No 75 -4.16 No 0 0 No -28 0.69 Yes 46 61.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 42130927 - NM_152344 LSM12 1 0.46 0.93 45 9.91 83.35 56 7.5 Yes 43 1.97 Yes 0 0 No -49 0.88 Yes 21 94.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42139854 - NM_152344 LSM12 1 0.07 0.13 9 8.54 94.41 45 7 Yes 75 -3.76 No 0 0 No -23 0.71 Yes 47 79.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42141312 - NM_152344 LSM12 1 0.18 0.24 14 -9.39 0 12 6.84 Yes -1 1.46 Yes 21 0.69 Yes -12 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 34669126 + NM_001114093 LSM14A 1 0.03 0.1 7 6.2 67.86 39 4.72 No 17 1.04 Yes 0 0 No -36 0.29 No 41 29.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 34686123 + NM_001114093 LSM14A 1 0.31 1.17 42 9.23 94.37 58 7.62 Yes 45 0.4 No 28 0.06 Yes -51 0.47 No 19 77.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 34687571 + NM_001114093 LSM14A 1 0.06 0.29 12 7.05 88.43 29 4.37 No 7 1.27 Yes 0 0 No -28 0.82 Yes 51 68.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 34690372 + NM_001114093 LSM14A 1 0.12 0.43 27 9.56 80.32 30 6.45 Yes 10 0.37 No 0 0 No -29 0.73 Yes 41 90.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 34698915 + NM_001114093 LSM14A 1 0.07 0.24 16 8.7 82.69 24 4.42 No 5 1.02 Yes 0 0 No -23 0.79 Yes 47 53.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 34699824 + NM_001114093 LSM14A 1 0.06 0.24 15 -3.31 0 43 9.71 Yes 30 0.61 No 24 0.64 Yes -25 0.27 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 34701195 + NM_001114093 LSM14A 1 0.03 0.13 7 10.39 85.05 38 4.86 No 41 0.97 Yes 0 0 No -29 0.44 No 41 71.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 34709883 + NM_001114093 LSM14A 1 0.11 0.1 7 5.97 82.39 33 5.06 No 72 1.21 Yes 0 0 No -38 0.79 Yes 32 75.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 34710613 + NM_001114093 LSM14A 1 0.16 0.38 20 4.61 81.23 24 5.21 No 11 1.04 Yes 0 0 No -23 0.67 Yes 38 57.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 34710613 + NM_001114093 LSM14A 1 2.84 7.26 72 4.61 81.23 24 5.21 No 11 1.04 Yes 0 0 No -23 0.67 Yes 38 57.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 34718273 + NM_001114093 LSM14A 1 3.96 3.4 68 -0.94 0 25 5.98 Yes 12 0.96 Yes 0 0 No -24 0.78 Yes 46 83.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 34718273 + NM_001114093 LSM14A 1 1.41 1.24 46 -0.94 0 25 5.98 Yes 12 0.96 Yes 0 0 No -24 0.78 Yes 46 83.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60701281 + NM_144703 LSM14B 1 1.76 1.68 57 5.04 86.85 24 6 Yes 11 1.06 Yes 23 0.95 Yes -23 0.9 Yes 47 93.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 60701395 + NM_144703 LSM14B 1 0.98 0.9 40 10.2 82.8 39 6.71 Yes 45 1.61 Yes 0 0 No -38 0.49 No 32 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 60702640 + NM_144703 LSM14B 1 13.8 7.39 72 9.78 84.31 50 8.03 Yes 37 2.49 Yes 26 0.06 Yes -45 0.83 Yes 25 91.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 60703980 + NM_144703 LSM14B 1 1.82 0.94 43 4.31 71.1 23 5.61 Yes 10 0.59 No 0 0 No -22 0.89 Yes 48 86.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 60707411 + NM_144703 LSM14B 1 0.54 0.56 29 5.15 77 21 5.57 Yes 8 1.41 Yes 0 0 No -20 0.92 Yes 50 89.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 14236596 + NM_014463 LSM3 1 0.08 0.49 26 5.61 81.32 20 6.46 Yes 7 1.19 Yes 0 0 No -23 0.91 Yes 47 90.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18420272 - NM_001252129 LSM4 1 0.07 0.14 9 8.31 78.66 37 6.5 Yes 24 1.1 Yes 0 0 No -24 0.91 Yes 46 72.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18421025 - NM_001252129 LSM4 1 0.08 0.42 20 6.86 85.81 26 6.32 Yes NA NA NA 25 0.54 Yes -25 0.51 No 45 49.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 18421060 - NM_001252129 LSM4 1 0.05 0.22 14 6.25 82.47 21 6.08 Yes 73 -5.99 No 25 0.54 Yes -30 0.72 Yes 40 49.28 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 18422112 - NM_001252129 LSM4 1 0.02 0.1 7 9.21 82.1 23 5.38 No 26 0.95 Yes 0 0 No -22 0.87 Yes 48 90.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 32528263 - NM_001130710 LSM5 1 0.04 0.19 12 -14.39 0 38 6.93 Yes 25 0.56 No 0 0 No -41 0.33 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 32528270 - NM_001130710 LSM5 1 0.06 0.38 20 -5.88 0 31 6.4 Yes 18 0.58 No 23 0.71 Yes -9 0.36 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 147097319 + NM_007080 LSM6 1 0.67 2.71 44 -1.1 0 12 4.12 No 13 -2.59 No 20 0.51 Yes -25 0.44 No 43 48.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 147097999 + NM_007080 LSM6 1 0.04 0.15 9 10.86 78.44 28 5.46 No 12 0.82 Yes 0 0 No -27 0.52 No 43 65.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 147098287 + NM_007080 LSM6 1 0.06 0.28 16 9.9 87.22 18 6.18 Yes 5 1.16 Yes 0 0 No -27 0.88 Yes 43 74.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 147105045 + NM_007080 LSM6 1 0.1 0.46 27 3.97 84.41 30 7.21 Yes 17 1.24 Yes 0 0 No -29 0.59 No 41 68.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 2321846 - NM_016199 LSM7 1 0.04 0.17 12 -1.89 0 17 4.11 No NA NA NA 26 0.85 Yes -16 0.52 No 59 37.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 2324192 - NM_016199 LSM7 1 9.39 46.06 72 -0.21 0 43 7.81 Yes 30 1.54 Yes 38 0.83 Yes -42 0.98 Yes 28 97.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2324912 - NM_016199 LSM7 1 3.83 18.61 72 11.46 92.81 29 5.29 No 28 0.17 No 27 0.46 Yes -28 0.55 No 49 60.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 2326139 - NM_016199 LSM7 1 0.16 0.72 34 6.97 87.97 18 5.29 No 5 1.13 Yes 29 0.57 Yes -29 0.67 Yes 53 64.82 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 2326201 - NM_016199 LSM7 1 0.16 0.72 32 4.02 77.74 22 4.9 No 61 0.23 No 0 0 No -21 0.82 Yes 49 86.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 117825022 + NM_016200 LSM8 1 0.16 0.54 30 6.23 87.97 29 5.57 Yes 25 0.61 No 0 0 No -28 0.9 Yes 42 94.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 117825700 + NM_016200 LSM8 1 0.09 0.35 19 5.63 89.07 23 5.39 No 10 0.56 No 22 0.82 Yes -22 0.89 Yes 48 91.66 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 117830871 + NM_016200 LSM8 1 0.3 0.99 42 7.04 78.76 22 4.26 No 75 0.2 No 0 0 No -21 0.88 Yes 49 90.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 117831970 + NM_016200 LSM8 1 0.45 1.54 55 2.02 0 22 5.72 Yes 3 1.82 Yes 0 0 No -30 0.78 Yes 40 85.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 1902634 + NM_001013255 LSP1 1 0.04 0.43 26 -13.07 0 18 3.81 No 31 -2.69 No 22 0.91 Yes -13 0.48 No 60 28.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 1902667 + NM_001013255 LSP1 1 0.02 0.24 14 -1.43 0 9 3.82 No 16 1.35 Yes 0 0 No -28 0.82 Yes 42 89.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 1905167 + NM_001013255 LSP1 1 0.19 2.29 63 1.47 0 9 3.87 No 23 0.27 No 0 0 No -35 0.84 Yes 35 82.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 1905482 + NM_001013255 LSP1 1 0.04 0.57 27 5.82 84.22 17 5.92 Yes 60 -3.65 No 29 0.81 Yes -28 0.64 No 42 41.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 1905735 + NM_001013255 LSP1 1 0.72 11.71 72 0.23 0 16 3.87 No 14 1.86 Yes 0 0 No -26 0.91 Yes 44 92.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 1909241 + NM_001013255 LSP1 1 0.01 0.14 9 4.49 79.93 22 5.28 No 34 -0.79 No 0 0 No -21 0.93 Yes 49 95.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 1913018 + NM_001013255 LSP1 1 0.07 1 43 7.15 87.11 26 4.99 No 35 2.06 Yes 0 0 No -47 0.51 No 23 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 35757741 + NM_205834 LSR 1 23.14 14.14 72 1.17 71.18 26 7.21 Yes 51 -0.97 No 22 0.7 Yes -25 0.8 Yes 45 66.6 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr21 47616212 - NM_001145436 LSS 1 0.53 0.49 24 4.75 85.03 18 5.39 No 46 0.92 Yes 23 0.86 Yes -24 0.51 No 53 49.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 47620461 - NM_001145436 LSS 1 1.09 0.92 47 6.31 70.6 34 6.32 Yes 21 1.06 Yes 0 0 No -33 0.96 Yes 37 96.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47627475 - NM_001145436 LSS 1 0.12 0.15 10 4.47 85.02 21 3.77 No 23 0.2 No 0 0 No -19 0.58 No 51 88.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 47628209 - NM_001145436 LSS 1 0.07 0.13 8 -2.87 0 10 4 No 36 1.75 Yes 0 0 No -48 0.8 Yes 22 95.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47628307 - NM_001145436 LSS 1 0.15 0.22 13 6.32 86.9 29 5.29 No 16 0.14 No 0 0 No -23 0.7 Yes 42 55.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 47628810 - NM_001145436 LSS 1 0.08 0.11 7 4.5 89.27 21 4.9 No 70 0.81 Yes 0 0 No -20 0.94 Yes 50 92.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47629700 - NM_001145436 LSS 1 1.77 2.32 62 10.54 88.57 29 6.25 Yes 16 0.97 Yes 0 0 No -28 0.96 Yes 42 97.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47632565 - NM_001145436 LSS 1 0.09 0.15 10 6.07 84.97 24 4.9 No 73 1.1 Yes 0 0 No -23 0.54 No 47 61.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 47643049 - NM_001145436 LSS 1 0.1 0.13 7 9.24 89.9 29 6.39 Yes 16 1.37 Yes 0 0 No -28 0.66 Yes 42 88.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 96397699 - NM_001256644 LTA4H 1 1521.39 203.96 72 8.45 88.54 31 7.19 Yes 18 0.43 No 30 0.47 Yes -30 0.51 No 47 42.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 96397760 - NM_001256644 LTA4H 1 7.44 0.99 40 7.06 87.45 25 6.32 Yes 47 1.58 Yes 24 0.86 Yes -24 0.76 Yes 46 78.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 96402888 - NM_001256644 LTA4H 1 0.04 0.11 8 1.59 73.9 24 6.56 Yes 43 0.86 Yes 0 0 No -23 0.75 Yes 47 86.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 96403883 - NM_001256644 LTA4H 1 0.04 0.1 7 1.58 68.96 23 6.38 Yes 7 0.96 Yes 0 0 No -22 0.69 Yes 48 75.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 96405644 - NM_001256644 LTA4H 1 0.31 0.76 35 4.17 79.91 23 5.67 Yes 1 0.87 Yes 29 0.5 Yes -22 0.38 No 45 54.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 96411355 - NM_001256644 LTA4H 1 0.03 0.1 7 3.61 0 22 4.09 No 9 0.68 No 0 0 No -26 0.7 Yes 44 85.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 96414537 - NM_001256644 LTA4H 1 0.04 0.13 8 8.57 86.07 60 7.74 Yes 4 1.78 Yes 24 0.7 Yes -24 0.68 Yes 46 56.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 96421341 - NM_001256644 LTA4H 1 0.05 0.13 7 -16.01 0 26 7.26 Yes 13 1.15 Yes 0 0 No -25 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 41121243 + NM_003573 LTBP4 1 1.52 0.17 11 0.12 68.49 29 4.22 No 53 1.08 Yes 28 0.9 Yes -28 0.93 Yes 42 89.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 30313696 - NM_015565 LTN1 1 0.19 0.11 7 6.75 78.56 15 5.29 No 2 1.89 Yes 0 0 No -24 0.41 No 49 71.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 30318607 - NM_015565 LTN1 1 0.57 0.36 21 -8.46 84.48 29 5.56 Yes 16 0.38 No 0 0 No -28 0.74 Yes 31 50.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 30329210 - NM_015565 LTN1 1 0.84 0.38 21 6.58 75.82 29 4.65 No 66 0.86 Yes 0 0 No -28 0.68 Yes 42 78.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30329749 - NM_015565 LTN1 1 0.95 0.38 18 3.46 66.88 25 5.32 No 9 -1.27 No 0 0 No -24 0.75 Yes 46 73.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 30331817 - NM_015565 LTN1 1 0.79 0.39 22 8.58 84.93 13 5.18 No 27 1.76 Yes 0 0 No -26 0.8 Yes 44 73.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30333515 - NM_015565 LTN1 1 3.29 1.08 45 3.63 70.41 36 3.89 No 34 0.23 No 0 0 No -24 0.71 Yes 46 74.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 30333515 - NM_015565 LTN1 1 0.47 0.15 9 3.63 70.41 36 3.89 No 34 0.23 No 0 0 No -24 0.71 Yes 46 74.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 30333856 - NM_015565 LTN1 1 2.39 0.75 36 10.76 95.65 32 6.91 Yes 66 0.24 No 25 0.62 Yes -25 0.82 Yes 45 88.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 30333856 - NM_015565 LTN1 1 0.42 0.14 8 10.76 95.65 32 6.91 Yes 66 0.24 No 25 0.62 Yes -25 0.82 Yes 45 88.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 30337089 - NM_015565 LTN1 1 7.31 2.36 61 7.66 78.18 22 5.83 Yes 9 1.56 Yes 21 0.83 Yes -21 0.75 Yes 49 90.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 30340296 - NM_015565 LTN1 1 0.39 0.25 14 4.48 75.97 40 6.71 Yes 53 0.78 Yes 27 0.29 Yes -27 0.53 No 43 60.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 30344044 - NM_015565 LTN1 1 0.32 0.19 12 -8.15 67.32 39 6.2 Yes 26 1.38 Yes 0 0 No -38 0.9 Yes 32 97.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30344581 - NM_015565 LTN1 1 0.34 0.19 12 7.03 77.92 41 4.85 No 0 0.52 No 0 0 No -30 0.31 No 41 55.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 144165630 + NM_001329953 LTV1 1 0.17 0.15 8 1.17 0 12 4.12 No 13 0.6 No 0 0 No -34 0.66 Yes 36 76.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 144167191 + NM_001329953 LTV1 1 0.13 0.21 13 -0.41 0 23 5.9 Yes 10 1.43 Yes 0 0 No -22 0.8 Yes 48 71.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 144180198 + NM_001329953 LTV1 1 0.55 0.81 33 6.26 81.63 62 8.62 Yes 16 1.66 Yes 0 0 No -28 0.74 Yes 42 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 144183192 + NM_001329953 LTV1 1 0.14 0.28 9 -1.18 0 18 4.47 No 9 -2.43 No 0 0 No -17 0.9 Yes 53 80.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 144183211 + NM_001329953 LTV1 1 0.07 0.11 7 2.28 0 24 4.84 No 11 0.69 No 23 0.82 Yes -23 0.45 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 144184253 + NM_001329953 LTV1 1 0.15 0.32 20 5.82 82.27 34 4.94 No 48 0.89 Yes 0 0 No -24 0.47 No 46 32.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 240802 - NM_201412 LUC7L 1 0.52 0.46 23 6.5 81.31 22 5.74 Yes 9 1 Yes 21 0.92 Yes -21 0.79 Yes 49 87.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 258664 - NM_201412 LUC7L 1 5.22 4.25 70 4.63 87.67 29 6.24 Yes 16 1.21 Yes 32 0.68 Yes -28 0.41 No 42 66.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 259486 - NM_201412 LUC7L 1 0.12 0.13 8 4.74 84.41 30 6.32 Yes 17 1.46 Yes 0 0 No -29 0.8 Yes 41 93.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 139061974 + NM_001270643 LUC7L2 1 0.07 0.19 12 7.43 93 37 7.61 Yes 24 1.67 Yes 0 0 No -24 0.79 Yes 34 58.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 139090393 + NM_001270643 LUC7L2 1 0.04 0.18 9 2.52 0 29 7.25 Yes 16 0.94 Yes 0 0 No -31 0.82 Yes 39 81.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 48801179 + NM_016424 LUC7L3 1 0.15 0.22 15 4.39 85.02 17 6.93 Yes 4 1.21 Yes 30 0.33 Yes -16 0.5 No 54 75.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 48814647 + NM_016424 LUC7L3 1 3.93 6.92 72 -0.1 58.43 64 8.69 Yes 51 0.13 No 22 0.81 Yes -22 0.76 Yes 48 65.86 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 48815497 + NM_016424 LUC7L3 1 0.13 0.26 14 5.15 94.52 17 4.8 No 65 0.41 No 20 0.89 Yes -20 0.93 Yes 50 86.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 48823876 + NM_016424 LUC7L3 1 0.12 0.31 17 -3.19 61.34 24 4.53 No 34 0.34 No 29 0.85 Yes -32 0.69 Yes 38 60.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 48823905 + NM_016424 LUC7L3 1 0.66 1.44 52 -5.28 56.96 33 6.16 Yes 20 0.85 Yes 21 0.76 Yes -32 0.67 Yes 38 69.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 48823908 + NM_016424 LUC7L3 1 0.08 0.21 11 -7.3 0 13 3.61 No 23 0.84 Yes 21 0.76 Yes -35 0.63 No 35 52.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 48825700 + NM_016424 LUC7L3 1 0.96 2.57 63 8.55 95.65 21 4.95 No 53 1.3 Yes 0 0 No -24 0.92 Yes 46 92.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 48826579 + NM_016424 LUC7L3 1 2.62 7.57 70 5.79 77.28 22 5.27 No 60 -4.47 No 25 0.66 Yes -25 0.55 No 45 59.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 48826584 + NM_016424 LUC7L3 1 0.05 0.11 8 -2.63 0 27 5.72 Yes 65 -4.79 No 25 0.66 Yes -30 0.41 No 40 53.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 48827866 + NM_016424 LUC7L3 1 0.07 0.19 10 -7.53 0 94 7.91 Yes 74 0.91 Yes 0 0 No -31 0.55 No 32 58.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 48828107 + NM_016424 LUC7L3 1 0.64 1.85 53 7.38 81.74 29 5.65 Yes 22 0.63 No 28 0.85 Yes -28 0.84 Yes 42 81.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 23456046 - NM_033631 LUZP1 1 1.71 0.15 9 7.05 84.83 30 5.48 No 49 1.15 Yes 0 0 No -29 0.44 No 15 77.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 23492130 - NM_033631 LUZP1 1 1.6 0.11 7 1.78 0 33 5.68 Yes 20 0.58 No 0 0 No -32 0.65 No 38 77.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 135614801 - NM_001128619 LUZP6 1 0.03 0.17 8 10.07 83.54 18 5.35 No 5 0.86 Yes 25 0.83 Yes -23 0.53 No 47 64.35 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 135621857 - NM_001128619 LUZP6 1 0.02 0.13 9 2.06 73.83 35 6.08 Yes 22 1.69 Yes 0 0 No -34 0.87 Yes 36 96.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 135645475 - NM_001128619 LUZP6 1 0.14 0.71 24 6.39 73.25 28 6.71 Yes 15 1.46 Yes 0 0 No -27 0.87 Yes 43 94.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 135653184 - NM_001128619 LUZP6 1 0.03 0.17 7 7.57 92.78 15 5.13 No 2 0.61 No 0 0 No -23 0.89 Yes 47 94.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 135657337 - NM_001128619 LUZP6 1 0.14 0.76 36 7.98 71.06 36 6.85 Yes 74 0.58 No 0 0 No -31 0.63 No 37 75.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 144100249 + NM_002346 LY6E 1 0.82 2.76 63 12.67 84.88 25 5.57 Yes 12 1.18 Yes 24 0.93 Yes -24 0.82 Yes 46 89.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144101308 + NM_002346 LY6E 1 0.03 0.1 7 6.26 77.27 23 4.88 No 67 1.1 Yes 0 0 No -25 0.48 No 45 77.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 144101678 + NM_002346 LY6E 1 1.53 5.06 68 3.89 0 19 5.57 Yes 38 0.27 No 26 0.49 Yes -26 0.66 Yes 44 72.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144101698 + NM_002346 LY6E 1 0.04 0.13 9 2.93 84.79 15 4.93 No 2 1.51 Yes 0 0 No -26 0.67 Yes 44 68.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 144102286 + NM_002346 LY6E 1 0.05 0.18 11 5.31 68.57 26 5.66 Yes 13 0.03 No 18 0.96 Yes -25 0.73 Yes 49 50.62 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 144102304 + NM_002346 LY6E 1 38.09 125.13 72 2.05 0 24 5.2 No 11 1.91 Yes 18 0.96 Yes -23 0.94 Yes 47 95.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144102309 + NM_002346 LY6E 1 0.07 0.24 15 -12.64 0 13 4.12 No 16 1.9 Yes 28 0.5 Yes -28 0.93 Yes 42 95.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144102333 + NM_002346 LY6E 1 0.25 0.82 39 7.43 91.25 9 5.74 Yes 40 1.91 Yes 28 0.5 Yes -28 0.39 No 42 67.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 144102734 + NM_002346 LY6E 1 0.47 3.39 68 3.43 0 30 5.66 Yes 17 0.86 Yes 24 0.93 Yes -29 0.86 Yes 41 74.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144102765 + NM_002346 LY6E 1 0.52 3.83 66 4.57 74.96 25 6.32 Yes 12 1.92 Yes 24 0.93 Yes -24 0.83 Yes 46 90.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144102965 + NM_002346 LY6E 1 1.3 11.18 72 9.7 82.66 26 5.57 Yes 38 0.45 No 24 0.85 Yes -24 0.94 Yes 46 94.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 160633086 - NM_001198759 LY75-CD302 1 2.25 0.19 12 8.04 82.16 21 5.82 Yes 8 0.35 No 0 0 No -29 0.53 No 52 74.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 160664664 - NM_001198759 LY75-CD302 1 20.01 32.56 72 9.6 95.03 28 4.1 No 35 -1.78 No 0 0 No -24 0.47 No 44 71.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 160671825 - NM_001198759 LY75-CD302 1 0.04 0.11 7 3.5 84.59 28 5.07 No 8 0.37 No 0 0 No -20 0.71 Yes 50 77.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 160673562 - NM_001198759 LY75-CD302 1 0.25 0.71 32 5.35 79.52 21 6.37 Yes 46 0.04 No 0 0 No -25 0.38 No 40 47.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 160682148 - NM_001198759 LY75-CD302 1 0.25 0.53 25 10.02 91.06 32 7.09 Yes 19 1.18 Yes 0 0 No -31 0.79 Yes 39 64.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 160690750 - NM_001198759 LY75-CD302 1 0.05 0.14 8 6.25 65.6 21 5.91 Yes 52 0.68 No 0 0 No -20 0.75 Yes 50 75.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 160710207 - NM_001198759 LY75-CD302 1 0.05 0.13 8 -12.47 0 30 6 Yes 70 -4.51 No 0 0 No -30 0.54 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 160717419 - NM_001198759 LY75-CD302 1 0.06 0.18 11 -0.16 71.6 25 4.84 No 26 0.15 No 0 0 No -24 0.83 Yes 46 93.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 160719718 - NM_001198759 LY75-CD302 1 0.03 0.1 7 6.14 77.35 16 4.39 No 63 -5.91 No 0 0 No -21 0.8 Yes 49 64.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 160731864 - NM_001198759 LY75-CD302 1 0.05 0.11 7 7.47 76.53 60 7.35 Yes 71 1.11 Yes 0 0 No -33 0.69 Yes 37 74.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 160738842 - NM_001198759 LY75-CD302 1 1.67 3.32 61 2.04 54.87 34 5.91 Yes 56 -3.14 No 0 0 No -33 0.72 Yes 37 77.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 160745394 - NM_001198759 LY75-CD302 1 0.56 0.83 35 11.05 88.9 36 4.62 No 31 1.37 Yes 0 0 No -21 0.55 No 49 63.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 160751077 - NM_001198759 LY75-CD302 1 0.16 0.32 16 9.54 86.44 39 7.27 Yes -3 0.93 Yes 0 0 No -38 0.5 No 44 63.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 160759592 - NM_001198759 LY75-CD302 1 0.6 0.93 41 10.52 85.05 23 6.24 Yes 10 1.79 Yes 0 0 No -22 0.8 Yes 48 91.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 160760117 - NM_001198759 LY75-CD302 1 24.62 35.35 72 9.33 93.18 31 7.27 Yes 1 0.16 No 0 0 No -30 0.6 No 40 51.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 6626528 + NM_004271 LY86 1 0.44 0.93 42 -12.99 76.1 28 5.15 No 15 0.73 No 0 0 No -26 0.37 No 43 52.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 6627593 + NM_004271 LY86 1 0.12 0.21 14 5.16 87.49 29 5.66 Yes 38 0.81 Yes 0 0 No -26 0.69 Yes 44 59.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 6632011 + NM_004271 LY86 1 0.11 0.21 14 8.3 87.63 17 7.15 Yes 4 1.16 Yes 0 0 No -24 0.6 No 46 63.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 6639506 + NM_004271 LY86 1 0.05 0.11 7 7.53 73.34 35 5.92 Yes 22 1.22 Yes 0 0 No -34 0.76 Yes 36 78.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 6649862 + NM_004271 LY86 1 2.33 4.51 67 1.17 0 36 10.77 Yes 23 1 Yes 0 0 No -33 0.42 No 37 47.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 6652364 + NM_004271 LY86 1 0.31 0.79 35 7.23 81.55 27 5.21 No 26 0.36 No 0 0 No -26 0.58 No 44 59.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 6653315 + NM_004271 LY86 1 0.07 0.21 11 5.87 79.08 51 7.51 Yes 9 1.72 Yes 0 0 No -21 0.7 Yes 49 85.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160766899 + NM_002348 LY9 1 2.37 0.92 37 6.63 79.57 45 7.71 Yes 10 1.1 Yes 22 0.9 Yes -44 0.46 No 48 75.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 160769475 + NM_002348 LY9 1 1.72 0.61 27 5.72 80.39 28 6.47 Yes 15 1.44 Yes 27 0.92 Yes -27 0.85 Yes 43 89.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160771579 + NM_002348 LY9 1 379.74 40.81 72 5.51 85.79 19 7.08 Yes 6 0.93 Yes 33 0.6 Yes -33 0.54 No 37 55.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 160783370 + NM_002348 LY9 1 7.24 0.56 26 10.22 86.71 59 8.27 Yes 46 2.12 Yes 24 0.43 Yes -29 0.47 No 38 57.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 74904772 + NM_015364 LY96 1 0.33 0.19 9 9.33 79.83 46 7.37 Yes 33 1.44 Yes 0 0 No -28 0.64 No 42 63.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 74907417 + NM_015364 LY96 1 0.11 0.1 7 -6.97 0 59 8.57 Yes 46 1.32 Yes 0 0 No -58 0.9 Yes 12 79.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 74917075 + NM_015364 LY96 1 0.19 0.11 7 3.43 71.53 43 5.07 No 55 1.17 Yes 0 0 No -23 0.4 No 41 36.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 74918450 + NM_015364 LY96 1 0.16 0.1 7 5.12 84.41 39 6.24 Yes 26 0.92 Yes 0 0 No -33 0.45 No 37 44.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 74939201 + NM_015364 LY96 1 1.45 0.54 29 1.94 62.01 49 7.91 Yes 36 0.86 Yes 0 0 No -48 0.85 Yes 22 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 4273423 - NM_001145725 LYAR 1 0.03 0.1 7 6.06 81.01 33 5.66 Yes 57 0.91 Yes 0 0 No -28 0.6 No 42 55.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 4273722 - NM_001145725 LYAR 1 0.07 0.15 11 -0.54 67.05 54 8.7 Yes 76 1.99 Yes 0 0 No -53 0.61 No 17 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 13211543 - NM_005583 LYL1 1 8.26 2.01 61 3.21 77.89 25 5.39 No 30 -3.22 No 0 0 No -24 0.86 Yes 46 85.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 13211863 - NM_005583 LYL1 1 7.37 1.06 41 9.21 81.61 27 5.74 Yes 14 1.37 Yes 26 0.89 Yes -26 0.88 Yes 44 91.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 13213250 - NM_005583 LYL1 1 0.62 0.13 7 4.17 85.94 29 7.16 Yes 16 0.76 No 0 0 No -28 0.92 Yes 42 94.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 13213253 - NM_005583 LYL1 1 0.9 0.19 13 4.61 80.2 26 6.96 Yes 13 0.78 Yes 0 0 No -25 0.93 Yes 45 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 56834434 + NM_002350 LYN 1 0.05 0.15 9 8.45 90.57 29 5.93 Yes 23 0.49 No 0 0 No -23 0.57 No 47 80.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 56836643 + NM_002350 LYN 1 0.3 0.99 47 8.92 86.44 55 9.38 Yes 42 1.35 Yes 0 0 No -41 0.46 No 16 76.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 56845001 + NM_002350 LYN 1 0.38 1.19 51 11.73 87.15 42 7.74 Yes 29 0.14 No 0 0 No -37 0.43 No 35 51.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 56850437 + NM_002350 LYN 1 0.08 0.28 14 7.23 83.82 18 7 Yes 5 1.23 Yes 0 0 No -17 0.53 No 53 69.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 56863216 + NM_002350 LYN 1 0.13 0.74 43 2.68 72.61 42 9.82 Yes 29 1.04 Yes 25 0.59 Yes -41 0.85 Yes 29 87.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 56866392 + NM_002350 LYN 1 0.05 0.22 15 1.63 72.14 29 7.12 Yes 16 1.6 Yes 0 0 No -29 0.55 No 42 59.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 56866395 + NM_002350 LYN 1 0.03 0.17 9 -0.04 0 32 7.33 Yes 19 1.59 Yes 0 0 No -32 0.56 No 39 58.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 56867598 + NM_002350 LYN 1 0.07 0.21 11 5.68 90.37 25 6.78 Yes 12 1.57 Yes 0 0 No -24 0.93 Yes 46 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 56879246 + NM_002350 LYN 1 0.05 0.14 9 4.11 78.74 21 5.2 No 61 1.82 Yes 33 0.65 Yes -18 0.39 No 52 51.53 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 56882279 + NM_002350 LYN 1 0.1 0.26 17 3.36 0 28 9.42 Yes 15 2.17 Yes 0 0 No -27 0.85 Yes 43 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 56894305 + NM_002350 LYN 1 0.08 0.24 14 10.41 83.46 41 6.17 Yes 50 1.06 Yes 0 0 No -40 0.7 Yes 30 62.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 56912209 + NM_002350 LYN 1 0.1 0.71 33 3.78 69.87 25 4.81 No 9 0.46 No 0 0 No -24 0.43 No 46 65.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 54963707 - NM_001279359 LYPLA1 1 4.7 9.26 72 5.44 90.05 24 5.1 No 11 1.15 Yes 23 0.96 Yes -23 0.89 Yes 47 96.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 54963707 - NM_001279359 LYPLA1 1 0.32 0.67 28 5.44 90.05 24 5.1 No 11 1.15 Yes 23 0.96 Yes -23 0.89 Yes 47 96.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 54970492 - NM_001279359 LYPLA1 1 0.03 0.11 8 0.58 0 10 4 No 28 0.43 No 0 0 No -44 0.74 Yes 26 59.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 54978011 - NM_001279359 LYPLA1 1 5.28 0.76 32 0.6 0 34 3.73 No 50 0.5 No 0 0 No -29 0.42 No 37 55.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 54978015 - NM_001279359 LYPLA1 1 0.79 0.11 8 -0.14 83.14 30 3.59 No 46 0.51 No 0 0 No -25 0.51 No 41 59.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 54988116 - NM_001279359 LYPLA1 1 0.37 0.88 42 9.09 86.33 24 6.87 Yes 11 1.25 Yes 0 0 No -29 0.7 Yes 41 61.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 54992890 - NM_001279359 LYPLA1 1 0.64 1.5 54 3.87 88.55 27 5.2 No 74 0.39 No 0 0 No -26 0.8 Yes 44 84.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 54994584 - NM_001279359 LYPLA1 1 0.98 2.29 66 11.47 89.4 16 6.2 Yes 42 0.73 No 0 0 No -30 0.49 No 40 59.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 55000057 - NM_001279359 LYPLA1 1 0.5 1.1 48 9.9 94.16 31 6.51 Yes 18 1.44 Yes 0 0 No -30 0.47 No 40 66.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 55012908 - NM_001279359 LYPLA1 1 0.1 0.22 13 7.98 81.71 61 9.68 Yes 48 2.58 Yes 42 0.62 Yes -53 0.49 No 17 77.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 55013934 - NM_001279359 LYPLA1 1 0.19 0.4 22 -4.38 52.46 37 5.54 No 18 0.97 Yes 0 0 No -36 0.7 Yes 34 77.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 55013937 - NM_001279359 LYPLA1 1 0.16 0.29 14 -0.07 64.31 34 5.38 No 15 0.95 Yes 0 0 No -33 0.72 Yes 37 85.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24119041 + NM_007260 LYPLA2 1 0.6 1.81 56 8.8 93.81 59 6.65 Yes 6 0.96 Yes 18 0.61 Yes -18 0.77 Yes 52 69.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 24119046 + NM_007260 LYPLA2 1 0.1 0.31 16 0.64 0 64 6.91 Yes 11 0.93 Yes 0 0 No -23 0.81 Yes 47 79.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24120200 + NM_007260 LYPLA2 1 0.08 0.21 13 2.34 0 9 3.87 No 52 1.43 Yes 0 0 No -33 0.63 No 37 70.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 24120375 + NM_007260 LYPLA2 1 0.07 0.14 9 -2.27 0 22 5.09 No 73 -0.96 No 0 0 No -21 0.48 No 19 19.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 24120519 + NM_007260 LYPLA2 1 0.1 0.24 15 4.27 71.55 32 4.67 No 19 1.05 Yes 30 0.68 Yes -31 0.78 Yes 39 83.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 24121041 + NM_007260 LYPLA2 1 0.71 1.19 47 5.62 78.83 32 5.92 Yes 26 1.04 Yes 31 0.68 Yes -31 0.77 Yes 39 80.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 24121134 + NM_007260 LYPLA2 1 0.08 0.17 7 7.77 88.28 47 5.06 No 53 0.16 No 21 0.66 Yes -22 0.8 Yes 48 79.86 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 24121174 + NM_007260 LYPLA2 1 0.16 0.31 18 -10.19 66.44 25 6.71 Yes 12 0.99 Yes 0 0 No -24 0.7 Yes 46 78.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 219352741 + NM_001300772 LYPLAL1 1 0.97 1.01 42 6.06 89.1 22 5.29 No 51 0.38 No 21 0.41 Yes -21 0.35 No 49 57.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 219353963 + NM_001300772 LYPLAL1 1 0.17 0.21 12 8.86 82.49 29 5.05 No -4 1.06 Yes 0 0 No -28 0.53 No 42 71.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 219366400 + NM_001300772 LYPLAL1 1 0.12 0.11 7 -4.02 0 28 6.71 Yes 33 1 Yes 23 0.03 Yes -27 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 219366471 + NM_001300772 LYPLAL1 1 40.17 40.85 72 7.12 76.82 33 5.81 Yes 20 -2.18 No 24 0.3 Yes -17 0.41 No 39 28.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 219383856 + NM_001300772 LYPLAL1 1 0.94 1.13 46 4.86 76.89 31 8.79 Yes 18 0.87 Yes 30 0.54 Yes -30 0.62 No 40 71.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 219368560 + NM_001300772 LYPLAL1 1 0.14 0.19 14 10.16 89.11 17 5.54 No 4 0.78 Yes 0 0 No -24 0.79 Yes 46 89.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 219372805 + NM_001300772 LYPLAL1 1 0.26 0.29 19 1.34 0 25 6.37 Yes 12 1.67 Yes 0 0 No -24 0.42 No 40 61.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 219383856 + NM_001300772 LYPLAL1 1 0.08 0.1 7 4.86 76.89 31 8.79 Yes 18 0.87 Yes 30 0.54 Yes -30 0.62 No 40 71.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 219383876 + NM_001300772 LYPLAL1 1 0.36 0.49 22 -3.53 86 23 5.19 No 38 0.86 Yes 0 0 No -29 0.47 No 41 58.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 20927235 + NM_001302835 LYRM1 1 0.51 0.58 27 10.01 93 38 6.01 Yes 28 1.6 Yes 0 0 No -31 0.45 No 30 45.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 130517924 + NM_181705 LYRM7 1 1.15 1.03 40 5.25 86.36 29 6.56 Yes 16 0.73 No 0 0 No -28 0.36 No 47 63.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 130518155 + NM_181705 LYRM7 1 0.08 0.1 7 4.07 85.56 35 6.72 Yes 22 1.16 Yes 0 0 No -24 0.77 Yes 46 80.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 89812597 - NM_198273 LYSMD3 1 0.17 0.14 9 7.62 91.35 24 5.91 Yes 52 1.09 Yes 0 0 No -23 0.8 Yes 47 78.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 89814827 - NM_198273 LYSMD3 1 1.75 1.4 49 2.75 68.68 38 6.24 Yes 25 0.97 Yes 24 0.77 Yes -37 0.76 Yes 33 80.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 89815243 - NM_198273 LYSMD3 1 6.1 5.01 69 8.87 89.43 23 4.99 No 10 0.59 No 22 0.93 Yes -22 0.9 Yes 48 91.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 89816279 - NM_198273 LYSMD3 1 2.53 1.85 51 8.94 83.95 23 5.38 No 70 1.22 Yes 22 0.71 Yes -26 0.79 Yes 44 84.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 89822820 - NM_198273 LYSMD3 1 1.64 0.72 36 7.59 86.94 52 7.93 Yes 39 0.8 Yes 23 0.48 Yes -23 0.65 No 47 74.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 235827855 - NM_000081 LYST 1 1.83 0.19 8 4.61 86.38 33 6.26 Yes 57 -5.38 No 0 0 No -32 0.66 Yes 38 65.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 235876477 - NM_000081 LYST 1 4.44 0.49 24 7.49 92.11 19 4.54 No 6 1.41 Yes 28 0.55 Yes -28 0.45 No 42 46.17 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 235896982 - NM_000081 LYST 1 1.52 0.28 17 5.63 0 13 4.36 No 26 0.49 No 0 0 No -23 0.64 No 47 47.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235897929 - NM_000081 LYST 1 1.33 0.21 12 3.34 87.39 18 4.57 No 42 0.57 No 0 0 No -21 0.53 No 49 65.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235901895 - NM_000081 LYST 1 12.52 1.85 58 7.76 93.7 23 5.74 Yes 10 1.43 Yes 22 0.76 Yes -22 0.74 Yes 48 73.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 235914679 - NM_000081 LYST 1 4.54 0.81 38 0.1 59.49 26 5 No 55 -5.11 No 23 0.53 Yes -25 0.74 Yes 45 79.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 235967915 - NM_000081 LYST 1 0.68 0.14 9 2.25 80.99 19 3.5 No 69 1.01 Yes 0 0 No -23 0.53 No 52 41.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 235971584 - NM_000081 LYST 1 3.56 0.32 18 9.46 88.2 29 5.36 No 16 1.05 Yes 0 0 No -28 0.91 Yes 42 91.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 235975804 - NM_000081 LYST 1 1.47 0.49 23 12.03 92.63 22 5.25 No 9 0.64 No 0 0 No -22 0.41 No 49 41.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235992337 - NM_000081 LYST 1 30.01 4.99 72 2.95 78.97 21 5.57 Yes 69 0.59 No 24 0.47 Yes -28 0.56 No 42 72.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 235992340 - NM_000081 LYST 1 32.19 5.64 70 5.25 92.4 18 5.29 No 66 0.59 No 24 0.47 Yes -25 0.67 Yes 45 77.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 9986517 - NM_001316974 LZIC 1 0.23 0.11 7 8.69 79.9 15 6.56 Yes 2 1.34 Yes 0 0 No -25 0.36 No 45 45.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 9990387 - NM_001316974 LZIC 1 2.67 1.17 41 8 78.24 34 7.45 Yes 21 0.39 No 0 0 No -34 0.72 Yes 36 79.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 9990387 - NM_001316974 LZIC 1 0.34 0.11 7 8 78.24 34 7.45 Yes 21 0.39 No 0 0 No -34 0.72 Yes 36 79.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 21340133 + NM_006767 LZTR1 1 0.51 0.24 14 -4.32 0 35 7.21 Yes 22 1.85 Yes 0 0 No -34 0.92 Yes 36 95.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21341609 + NM_006767 LZTR1 1 0.17 0.14 8 -0.08 79.76 26 5.29 No 62 -5.15 No 0 0 No -25 0.87 Yes 45 43.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 21348395 + NM_006767 LZTR1 1 2.05 0.81 38 1.54 68.98 23 5.39 No 63 2.26 Yes 0 0 No -22 0.83 Yes 48 85.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21348707 + NM_006767 LZTR1 1 3.36 0.6 31 5.84 76.28 27 6.16 Yes 14 0.84 Yes 0 0 No -26 0.77 Yes 44 61.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 21348905 + NM_006767 LZTR1 1 0.59 0.13 8 -1.78 0 10 4 No -3 0.57 No 0 0 No -36 0.78 Yes 34 82.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 21348923 + NM_006767 LZTR1 1 0.57 0.13 7 1.03 65.11 28 5.2 No 39 -3.41 No 28 0.24 Yes -27 0.67 Yes 43 32.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 21349203 + NM_006767 LZTR1 1 2.38 1.33 57 4.36 80.25 22 4.9 No 67 1.46 Yes 24 0.6 Yes -21 0.75 Yes 49 53.73 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 21349656 + NM_006767 LZTR1 1 1.55 0.69 35 7.72 84.47 39 6.47 Yes 26 0.47 No 26 0.52 Yes -38 0.55 No 44 77.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 21350051 + NM_006767 LZTR1 1 0.68 0.29 17 5.3 85.67 26 4.98 No 25 0.47 No 20 0.9 Yes -24 0.55 No 33 75.95 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 9098984 - NM_001207024 M6PR 1 6.53 12.4 68 8.02 87.58 22 5.09 No 45 1.57 Yes 22 0.77 Yes -22 0.35 No 48 34.79 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 9099421 - NM_001207024 M6PR 1 0.22 0.47 22 5.65 76.81 30 6.88 Yes 17 1.16 Yes 29 0.73 Yes -29 0.69 Yes 41 84.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 116672665 + NM_152367 MAB21L3 1 1.32 0.6 27 9.65 95.55 27 5.74 Yes 31 0.7 No 0 0 No -26 0.93 Yes 44 93.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 20195248 - NM_182762 MACC1 1 0.03 0.1 7 6.07 77.43 23 6.26 Yes 10 0.95 Yes 0 0 No -28 0.73 Yes 42 73.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 20199861 - NM_182762 MACC1 1 0.22 0.74 35 -5.39 0 14 4.02 No 49 1.35 Yes 0 0 No -44 0.53 No 13 87.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 20202352 - NM_182762 MACC1 1 0.37 0.14 9 5.57 78.58 22 5.29 No 0 0.67 No 0 0 No -21 0.78 Yes 49 92.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 20202352 - NM_182762 MACC1 1 0.66 0.29 17 5.57 78.58 22 5.29 No 0 0.67 No 0 0 No -21 0.78 Yes 49 92.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 20202539 - NM_182762 MACC1 1 2.47 1.04 42 11.98 91.54 22 6.58 Yes 41 1.64 Yes 0 0 No -27 0.59 No 43 69.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 20202539 - NM_182762 MACC1 1 2.03 0.85 37 11.98 91.54 22 6.58 Yes 41 1.64 Yes 0 0 No -27 0.59 No 43 69.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 20206513 - NM_182762 MACC1 1 0.59 0.17 10 6.79 71.3 29 6.56 Yes 16 2.37 Yes 0 0 No -28 0.89 Yes 42 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 20208045 - NM_182762 MACC1 1 4.61 1.32 54 8.7 85.3 32 6.84 Yes 19 1.05 Yes 0 0 No -31 0.81 Yes 39 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 20208141 - NM_182762 MACC1 1 0.45 0.14 7 10.32 93.75 32 5.63 Yes 5 1.16 Yes 0 0 No -31 0.73 Yes 41 77.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 20208342 - NM_182762 MACC1 1 0.4 0.13 8 6.17 76.23 20 7.02 Yes 7 1.27 Yes 0 0 No -25 0.41 No 46 59.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 20210405 - NM_182762 MACC1 1 154.87 38.83 72 5.28 80.02 31 5.6 Yes 18 1.29 Yes 30 0.8 Yes -30 0.72 Yes 51 68.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 20217554 - NM_182762 MACC1 1 11.65 3.04 61 5.58 70.45 44 4.42 No 10 0.13 No 0 0 No -29 0.38 No 41 46.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 20220062 - NM_182762 MACC1 1 2.65 0.68 33 12.13 85.67 48 6.98 Yes 35 1.21 Yes 0 0 No -33 0.35 No 35 75.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 20224702 - NM_182762 MACC1 1 103.59 25.9 71 6.38 78.79 30 6.56 Yes 17 1.02 Yes 29 0.78 Yes -29 0.78 Yes 41 75.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 20231284 - NM_182762 MACC1 1 1.38 0.31 16 7.93 88.73 16 4.6 No 7 1.63 Yes 0 0 No -19 0.73 Yes 51 63.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 20238294 - NM_182762 MACC1 1 126.23 30.83 72 4.61 80.43 27 6.11 Yes 14 0.77 No 26 0.76 Yes -26 0.49 No 44 67.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 20240099 - NM_182762 MACC1 1 0.84 0.1 7 10.85 95.97 25 8.34 Yes 41 1.09 Yes 0 0 No -24 0.83 Yes 46 73.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 20252562 - NM_182762 MACC1 1 3.73 0.85 35 10.02 89.87 21 5.88 Yes 8 1.82 Yes 0 0 No -20 0.73 Yes 50 78.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 39698479 + NM_012090 MACF1 1 0.15 0.14 9 2 0 74 9.69 Yes 61 2.44 Yes 0 0 No -39 0.04 No 35 12.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 39726061 + NM_012090 MACF1 1 1.42 1.35 47 6.89 88.56 43 7.75 Yes 51 1.34 Yes 42 0.31 Yes -45 0.55 No 25 73.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 39727127 + NM_012090 MACF1 1 0.15 0.15 9 9.85 90.02 24 5.47 No 74 0.43 No 0 0 No -27 0.36 No 46 35.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 39749709 + NM_012090 MACF1 1 0.13 0.17 11 5.43 79.56 42 6.93 Yes 29 1.38 Yes 33 0.86 Yes -37 0.61 No 29 75.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 39763299 + NM_012090 MACF1 1 0.18 0.17 9 0.3 0 13 4.12 No 37 1.59 Yes 0 0 No -25 0.88 Yes 45 90.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 39789868 + NM_012090 MACF1 1 0.13 0.11 7 -3.21 0 26 6.4 Yes 13 0.78 Yes 0 0 No -25 0.69 Yes 45 55.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 39794272 + NM_012090 MACF1 1 4.17 1.65 53 1.8 52.35 36 6.93 Yes 72 0.32 No 0 0 No -35 0.57 No 35 64.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 39796874 + NM_012090 MACF1 1 59.84 23.82 72 13.15 92.63 59 7.8 Yes 46 2.69 Yes 32 0.05 Yes -58 0.83 Yes 16 74.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 39816465 + NM_012090 MACF1 1 0.29 0.29 16 -0.35 0 12 4.19 No 36 0.78 Yes 0 0 No -48 0.44 No 39 74.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 39824809 + NM_012090 MACF1 1 0.76 0.74 37 -1.17 67.75 41 5.6 Yes 25 0.25 No 36 0.8 Yes -33 0.87 Yes 37 94.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 39893212 + NM_012090 MACF1 1 0.17 0.14 9 7.55 87.15 19 5.51 No 6 1.78 Yes 0 0 No -25 0.44 No 45 61.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 39898705 + NM_012090 MACF1 1 0.18 0.21 12 6.5 86.23 16 5.74 Yes 22 0.56 No 22 0.93 Yes -34 0.79 Yes 36 72.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 39916781 + NM_012090 MACF1 1 0.1 0.11 7 5.21 85.51 16 5.12 No 76 0.25 No 0 0 No -15 0.48 No 55 75.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 39930766 + NM_012090 MACF1 1 8.33 5.43 68 6.35 80.82 68 6.49 Yes 50 1.17 Yes 25 0.67 Yes -25 0.37 No 45 30.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 39946591 + NM_012090 MACF1 1 27.6 24.75 72 7.02 88.45 103 9.13 Yes 27 0.09 No 39 0.58 Yes -39 0.67 Yes 31 74.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 15976570 + NM_080676 MACROD2 1 0.11 0.26 13 4.47 69.28 37 8.72 Yes 24 0.54 No 0 0 No -36 0.83 Yes 34 93.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 15981628 + NM_080676 MACROD2 1 0.19 0.53 29 5.37 76.75 31 6.4 Yes 22 -3.74 No 0 0 No -34 0.23 No 40 37.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 15994361 + NM_080676 MACROD2 1 0.06 0.17 9 3.86 82.81 31 7.15 Yes 54 -3.12 No 0 0 No -30 0.74 Yes 40 70.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 16025215 + NM_080676 MACROD2 1 722.44 224.19 72 7.71 84.64 26 5.99 Yes 13 1.04 Yes 25 0.77 Yes -36 0.42 No 44 63.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 16030477 + NM_080676 MACROD2 1 6.58 2.38 58 8.48 94.01 29 7.34 Yes 16 1 Yes 25 0.91 Yes -28 0.85 Yes 42 94.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 1962963 - NM_003550 MAD1L1 1 0.34 0.36 19 8.52 84.58 33 6 Yes -4 0.94 Yes 0 0 No -32 0.9 Yes 38 91.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 1964503 - NM_003550 MAD1L1 1 0.89 0.76 35 10.48 98.02 25 4.95 No 9 0.62 No 0 0 No -24 0.92 Yes 46 91.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2011554 - NM_003550 MAD1L1 1 0.36 0.24 15 9.45 84.72 26 5.16 No 13 0.67 No 0 0 No -25 0.58 No 45 63.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 2032013 - NM_003550 MAD1L1 1 0.44 0.22 14 8.63 82.82 22 6.08 Yes 9 2.09 Yes 0 0 No -21 0.88 Yes 49 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2044484 - NM_003550 MAD1L1 1 0.25 0.18 13 8.37 91.7 27 5.74 Yes 57 1.07 Yes 0 0 No -26 0.65 No 50 79.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 2082461 - NM_003550 MAD1L1 1 0.23 0.17 11 8.06 79.01 26 5.66 Yes 22 0.01 No 0 0 No -28 0.61 No 45 66.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 2082649 - NM_003550 MAD1L1 1 0.29 0.22 14 5.33 85.95 23 4.9 No 10 0.57 No 0 0 No -22 0.85 Yes 48 90.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2188270 - NM_003550 MAD1L1 1 1.44 1.11 46 10.41 87.46 34 5.83 Yes 21 0.22 No 27 0.44 Yes -27 0.41 No 37 40.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 2240193 - NM_003550 MAD1L1 1 2.76 2.18 58 7.95 84.53 44 6.7 Yes 31 1.72 Yes 23 0.92 Yes -23 0.87 Yes 47 84.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2241734 - NM_003550 MAD1L1 1 0.24 0.18 11 8.22 86.85 27 5.09 No 74 -4.58 No 26 0.58 Yes -26 0.73 Yes 44 70.01 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2247656 - NM_003550 MAD1L1 1 0.27 0.22 15 8.32 80.73 29 6.55 Yes 16 0.73 No 0 0 No -27 0.45 No 43 58.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 2249670 - NM_003550 MAD1L1 1 0.52 0.4 21 11.76 91.79 32 4.4 No 76 0.49 No 25 0.79 Yes -25 0.83 Yes 45 87.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2255974 - NM_003550 MAD1L1 1 0.21 0.15 9 9.83 91.09 12 4.68 No -1 0.56 No 0 0 No -26 0.92 Yes 44 94.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2257669 - NM_003550 MAD1L1 1 0.1 0.15 8 -4.23 0 16 4.25 No 18 0.96 Yes 0 0 No -30 0.75 Yes 40 85.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2259151 - NM_003550 MAD1L1 1 0.19 0.17 11 8.55 86.31 54 6.93 Yes 70 0.77 No 0 0 No -23 0.66 Yes 47 72.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2260658 - NM_003550 MAD1L1 1 0.84 0.71 36 9.72 91.55 21 5.92 Yes 8 1.52 Yes 20 0.77 Yes -20 0.9 Yes 50 91.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2265335 - NM_003550 MAD1L1 1 0.25 0.21 14 7.52 80.17 36 7.21 Yes 23 1.46 Yes 0 0 No -35 0.86 Yes 35 93.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2265378 - NM_003550 MAD1L1 1 2.35 2.14 58 7.54 91.84 24 5.19 No 21 0.09 No 0 0 No -23 0.85 Yes 47 85.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2266595 - NM_003550 MAD1L1 1 0.27 0.28 17 6.54 83.81 27 5.73 Yes 66 -1.37 No 0 0 No -26 0.69 Yes 21 62.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 2269700 - NM_003550 MAD1L1 1 0.67 0.65 29 6.46 84.28 28 5.1 No 6 0.24 No 0 0 No -27 0.77 Yes 43 81.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2269774 - NM_003550 MAD1L1 1 2.37 2.35 64 -8.69 0 32 5.92 Yes 19 2.27 Yes 0 0 No -31 0.91 Yes 39 93.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2270360 - NM_003550 MAD1L1 1 90.38 6.6 71 4.97 75.28 9 6.78 Yes -4 0 No 28 0.64 Yes -28 0.81 Yes 42 89.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2270363 - NM_003550 MAD1L1 1 616.44 47.4 72 8.71 82 27 4.5 No NA NA NA 28 0.64 Yes -25 0.82 Yes 45 87.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2270767 - NM_003550 MAD1L1 1 1.14 0.13 8 3.54 79.93 20 5.1 No 46 -1.69 No 0 0 No -27 0.53 No 51 58.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 120981419 - NM_002358 MAD2L1 1 0.1 0.31 18 5.24 80.23 19 4.7 No 33 1 Yes 0 0 No -29 0.67 Yes 47 78.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 120981858 - NM_002358 MAD2L1 1 0.05 0.13 8 9.29 88.83 12 4.9 No 14 0.45 No 0 0 No -22 0.87 Yes 48 73.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 11734868 - NM_006341 MAD2L2 1 1.55 1.29 50 1.08 0 9 3.87 No 22 1.79 Yes 0 0 No -34 0.84 Yes 36 93.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11736167 - NM_006341 MAD2L2 1 0.73 0.58 26 2.34 69.18 29 5.92 Yes 27 1.52 Yes 0 0 No -28 0.95 Yes 42 94.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47297646 + NM_130475 MADD 1 0.42 0.13 7 10.9 91.41 17 5.48 No 4 2.35 Yes 0 0 No -23 0.61 No 48 71.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 47304356 + NM_130475 MADD 1 0.15 0.1 7 3.69 0 23 7.81 Yes 10 2.19 Yes 29 0.95 Yes -22 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 47305949 + NM_130475 MADD 1 0.43 0.21 12 3.2 75.63 11 5.74 Yes -2 1.06 Yes 0 0 No -26 0.34 No 44 40.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47307028 + NM_130475 MADD 1 3.93 0.9 39 3.71 71.3 23 5.1 No 18 -1.89 No 0 0 No -22 0.91 Yes 48 66.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 47311335 + NM_130475 MADD 1 0.73 0.26 11 -1.81 84.31 32 6 Yes -2 -0.72 No 0 0 No -27 0.51 No 45 79.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 47311339 + NM_130475 MADD 1 1.36 0.51 21 -0.86 0 36 6.32 Yes 2 -1 No 0 0 No -31 0.54 No 41 78.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 47317268 + NM_130475 MADD 1 0.43 0.14 7 3.63 80.73 26 5 No 13 0.56 No 0 0 No -25 0.96 Yes 45 97.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 47345091 + NM_130475 MADD 1 0.45 0.21 10 9.7 79.84 29 5.66 Yes 57 1.4 Yes 0 0 No -28 0.82 Yes 45 75.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47346812 + NM_130475 MADD 1 5.08 0.38 21 5.24 81.8 35 6.78 Yes 22 2.01 Yes 34 0.92 Yes -34 0.83 Yes 36 94.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47348288 + NM_130475 MADD 1 521.1 39.64 72 14.03 92.02 28 6.93 Yes 15 1.48 Yes 27 0.95 Yes -27 0.92 Yes 43 92.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47348382 + NM_130475 MADD 1 2.66 0.18 12 9.15 88.54 22 6.09 Yes 6 0.58 No 0 0 No -21 0.7 Yes 52 61.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 1291743 + NM_001297430 MAEA 1 1.38 2.1 60 10.21 78.23 35 5.07 No 74 0.93 Yes 34 0.26 Yes -26 0.62 No 36 83.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 1322421 + NM_001297430 MAEA 1 0.25 0.36 17 5.37 80.01 26 6.08 Yes NA NA NA 25 0.79 Yes -25 0.67 Yes 45 70.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1323664 + NM_001297430 MAEA 1 0.25 0.36 20 6.5 83.4 13 5.48 No 0 1.67 Yes 0 0 No -27 0.59 No 47 58.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 1330624 + NM_001297430 MAEA 1 0.4 0.49 28 -0.68 0 19 3.82 No 42 0.47 No 23 0.42 Yes -54 0.92 Yes 16 69.53 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 1332213 + NM_001297430 MAEA 1 0.77 1 44 -0.49 0 40 6.68 Yes 27 1.16 Yes 25 0.57 Yes -39 0.45 No 53 40.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 145161760 + NM_032272 MAF1 1 0.49 1.33 52 4.1 76.01 26 5.65 Yes 37 1.19 Yes 0 0 No -25 0.63 No 45 89.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 145161963 + NM_032272 MAF1 1 0.37 0.81 45 1.35 72.51 18 4.9 No 53 -1.25 No 30 0.78 Yes -17 0.64 No 53 75 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 51639248 + NM_001005333 MAGED1 1 0.1 0.24 11 2.22 0 20 4.58 No -2 0.47 No 19 0.88 Yes -19 0.9 Yes 51 89.98 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 51640891 + NM_001005333 MAGED1 1 0.04 0.11 8 -13.3 0 32 5.39 No 19 0.32 No 0 0 No -26 0.78 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 51645243 + NM_001005333 MAGED1 1 0.15 0.51 26 -14.23 0 35 9.19 Yes 22 1.18 Yes 0 0 No -34 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 54838517 + NM_201222 MAGED2 1 0.23 0.19 13 3.59 67.86 31 7.34 Yes 18 1.27 Yes 0 0 No -30 0.86 Yes 40 76.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 10761983 - NM_001300739 MAGOHB 1 3.33 8.36 72 9.72 89.18 32 7.82 Yes 19 1.09 Yes 31 0.91 Yes -31 0.76 Yes 39 77.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 77082307 - NM_032121 MAGT1 1 0.18 0.63 25 5.97 87.96 27 5.96 Yes 14 1.34 Yes 0 0 No -26 0.87 Yes 44 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77082307 - NM_032121 MAGT1 1 0.13 0.33 20 5.97 87.96 27 5.96 Yes 14 1.34 Yes 0 0 No -26 0.87 Yes 44 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77104507 - NM_032121 MAGT1 1 0.05 0.14 10 8.93 86.91 37 6.99 Yes 67 -3.21 No 0 0 No -29 0.63 No 41 80.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 77124147 - NM_032121 MAGT1 1 0.21 0.72 29 10.86 85.4 23 6.82 Yes 10 0.86 Yes 22 0.76 Yes -22 0.9 Yes 48 91.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 77127038 - NM_032121 MAGT1 1 0.07 0.29 19 5.24 80.12 20 6.71 Yes 7 1.21 Yes 0 0 No -19 0.5 No 51 74.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 77135111 - NM_032121 MAGT1 1 0.83 2.38 58 8.61 81.91 30 5.92 Yes 72 -4.57 No 0 0 No -29 0.52 No 40 59.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 77139526 - NM_032121 MAGT1 1 0.18 0.5 25 4.75 85.02 17 6.93 Yes 4 1.07 Yes 0 0 No -21 0.45 No 54 49.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 77148781 - NM_032121 MAGT1 1 0.04 0.1 7 6.81 77.41 52 7.28 Yes 13 1.45 Yes 0 0 No -25 0.78 Yes 19 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 200826507 + NM_024520 MAIP1 1 0.67 0.75 31 -0.21 0 56 7.59 Yes 66 1.18 Yes 0 0 No -42 0.68 Yes 28 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 200826549 + NM_024520 MAIP1 1 1.68 1.82 61 6.04 72.51 32 6.3 Yes 11 1.43 Yes 0 0 No -31 0.75 Yes 39 93.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 200826688 + NM_024520 MAIP1 1 0.51 0.86 34 10.05 92.19 29 5.51 No 16 0.44 No 0 0 No -28 0.83 Yes 42 83.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 23345565 + NM_138446 MALSU1 1 0.03 0.13 9 1.19 69.81 27 5.8 Yes 4 0.33 No 0 0 No -26 0.96 Yes 44 96.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 23347594 + NM_138446 MALSU1 1 0.43 0.81 40 9.88 84.38 24 4.64 No 11 0.5 No 0 0 No -23 0.65 No 51 65.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 23348978 + NM_138446 MALSU1 1 1.65 3.13 68 -0.35 0 44 5.94 Yes -4 1.09 Yes 0 0 No -31 0.89 Yes 39 88.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 56351698 + NM_006785 MALT1 1 0.85 2.07 52 4.74 84.41 32 4.52 No 25 1.13 Yes 0 0 No -31 0.84 Yes 39 85.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 56365480 + NM_006785 MALT1 1 0.68 1.69 55 9.93 91.99 17 5.29 No 63 1.03 Yes 0 0 No -16 0.56 No 54 63.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 56367776 + NM_006785 MALT1 1 0.29 0.79 35 2.66 77.36 23 5.43 No 10 0.74 No 0 0 No -25 0.47 No 48 52.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 56376613 + NM_006785 MALT1 1 0.17 0.47 24 -3.27 0 38 6.16 Yes 25 1.08 Yes 0 0 No -37 0.84 Yes 33 80.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 56387611 + NM_006785 MALT1 1 0.11 0.32 15 6.93 79.24 79 6.15 Yes 72 0.38 No 0 0 No -29 0.55 No 44 70.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 56390284 + NM_006785 MALT1 1 0.15 0.36 21 -0.5 0 33 8.2 Yes 38 0.82 Yes 0 0 No -50 0.32 No 37 33.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 56393501 + NM_006785 MALT1 1 0.67 2.32 63 8.84 88.18 17 6.68 Yes 4 1.3 Yes 0 0 No -20 0.3 No 50 34.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 56401113 + NM_006785 MALT1 1 0.85 2.79 67 4.65 0 20 4.58 No 59 0.66 No 0 0 No -19 0.64 No 51 63.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 56401682 + NM_006785 MALT1 1 0.81 2.33 55 11.23 92.08 26 6.81 Yes 13 1.15 Yes 0 0 No -33 0.65 No 45 57.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 56402767 + NM_006785 MALT1 1 0.08 0.22 12 7.28 75.41 30 7.34 Yes 17 0.88 Yes 0 0 No -30 0.52 No 36 60.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 56404999 + NM_006785 MALT1 1 0.28 0.71 33 3.66 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.71 Yes 51 85.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 56406304 + NM_006785 MALT1 1 0.35 0.97 39 6.96 90.84 17 4.34 No 76 1.28 Yes 0 0 No -25 0.41 No 47 53.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 56413267 + NM_006785 MALT1 1 0.04 0.13 8 9.82 87.44 33 5.66 Yes 70 1.19 Yes 0 0 No -32 0.45 No 38 68.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 56414004 + NM_006785 MALT1 1 0.04 0.13 7 8.79 81.95 27 5.74 Yes 63 0.44 No 0 0 No -26 0.67 Yes 21 33.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 56414480 + NM_006785 MALT1 1 0.14 0.42 19 2.38 77.79 19 3.33 No 6 0.23 No 0 0 No -21 0.79 Yes 49 52.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 139751385 + NM_206920 MAMDC4 1 2.01 0.36 18 8.7 77.42 25 6 Yes 62 -0.76 No 0 0 No -29 0.62 No 41 75.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 179160702 + NM_014757 MAML1 1 0.93 0.14 7 4.95 93.7 22 4.8 No 9 2.19 Yes 0 0 No -21 0.91 Yes 49 95.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179161463 + NM_014757 MAML1 1 0.76 0.11 7 10.27 85.88 26 5.49 No 13 1.91 Yes 0 0 No -30 0.56 No 45 66.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 179195856 + NM_014757 MAML1 1 0.14 0.13 7 -4.81 0 11 3.87 No -2 0.31 No 0 0 No -30 0.92 Yes 40 93.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 179196369 + NM_014757 MAML1 1 0.74 0.35 22 11.15 92.74 10 5.48 No 25 0.9 Yes 0 0 No -24 0.77 Yes 46 70.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179200731 + NM_014757 MAML1 1 1.15 0.88 37 5.55 83.06 68 7.54 Yes 7 1.3 Yes 0 0 No -19 0.62 No 51 74.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 179203050 + NM_014757 MAML1 1 0.22 0.15 10 3.12 77.04 24 3.86 No 5 1.01 Yes 0 0 No -23 0.69 Yes 47 76.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 95807831 - NM_032427 MAML2 1 1.95 0.63 26 8.44 86.73 26 5.63 Yes 70 1.59 Yes 0 0 No -25 0.83 Yes 45 87.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 95942159 - NM_032427 MAML2 1 1.08 0.24 13 5.98 85.58 28 5.54 No 76 -6.04 No 0 0 No -27 0.93 Yes 43 90.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 96050295 - NM_032427 MAML2 1 1.21 0.38 19 8.77 89.78 32 5.82 Yes 19 0.73 No 0 0 No -31 0.8 Yes 39 81.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 119502554 - NM_005907 MAN1A1 1 0.08 0.15 10 10.96 85.53 26 6.82 Yes 13 1.96 Yes 0 0 No -25 0.97 Yes 45 97.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 119517343 - NM_005907 MAN1A1 1 0.06 0.14 10 7.32 77.25 25 6.24 Yes 50 1.06 Yes 0 0 No -24 0.89 Yes 46 87.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 119517373 - NM_005907 MAN1A1 1 0.21 0.5 27 3.71 58.78 33 8.85 Yes 20 1.07 Yes 0 0 No -37 0.65 No 33 72.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 119524310 - NM_005907 MAN1A1 1 0.25 0.6 28 6.34 91.75 22 5.35 No 70 0.33 No 0 0 No -22 0.79 Yes 48 58.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 119532096 - NM_005907 MAN1A1 1 0.3 0.82 40 4.8 79.17 21 4.43 No 48 0.39 No 20 0.66 Yes -20 0.6 No 50 61.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 119577014 - NM_005907 MAN1A1 1 0.58 1.19 46 8.59 76.44 47 8.38 Yes 18 0.15 No 0 0 No -35 0.41 No 35 43.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 119590737 - NM_005907 MAN1A1 1 0.53 1.04 43 7.93 79.04 24 4.98 No 11 -0.37 No 0 0 No -23 0.67 Yes 47 70.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 117950033 + NM_006699 MAN1A2 1 0.19 0.47 26 3.07 68.98 38 5.98 Yes 25 1.04 Yes 0 0 No -37 0.71 Yes 33 72.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 117963738 + NM_006699 MAN1A2 1 0.08 0.13 7 2.84 74.81 39 6.92 Yes 17 1.02 Yes 0 0 No -38 0.53 No 32 56.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 117964077 + NM_006699 MAN1A2 1 0.21 0.26 15 9 90.03 28 4.03 No 46 0.47 No 0 0 No -27 0.68 Yes 43 63.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 117983936 + NM_006699 MAN1A2 1 0.51 0.69 32 7.75 86.95 57 7.43 Yes 63 1.41 Yes 0 0 No -25 0.67 Yes 45 87.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 117985957 + NM_006699 MAN1A2 1 0.19 0.24 16 3.1 67.91 36 8.1 Yes 23 1.69 Yes 0 0 No -35 0.65 No 35 84.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 117998706 + NM_006699 MAN1A2 1 0.15 0.21 13 4.11 87.54 23 5.02 No 60 0.77 No 0 0 No -23 0.82 Yes 47 80.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 118057470 + NM_006699 MAN1A2 1 0.97 1 44 0.96 66.13 34 6.35 Yes 49 0.61 No 33 0.64 Yes -33 0.85 Yes 24 65.69 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 139982719 + NR_045720 MAN1B1 1 3.33 1.76 53 6.06 78.05 24 5.83 Yes 67 -2.33 No 24 0.58 Yes -24 0.54 No 46 53.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 139983404 + NR_045720 MAN1B1 1 0.27 0.13 7 3.99 76.04 29 5.44 No 74 0.43 No 28 0.68 Yes -28 0.4 No 48 36.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 139990691 + NR_045720 MAN1B1 1 0.61 0.39 22 -1.62 76.86 20 5.51 No 7 1.37 Yes 0 0 No -31 0.84 Yes 39 69.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 140002052 + NR_045720 MAN1B1 1 0.61 0.24 16 5.81 78.4 19 5.92 Yes NA NA NA 0 0 No -28 0.5 No 42 50.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140002461 + NR_045720 MAN1B1 1 0.56 0.32 19 2.92 72.62 30 7.28 Yes 17 0.74 No 0 0 No -29 0.59 No 41 51.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140002878 + NR_045720 MAN1B1 1 0.49 0.29 15 3.56 75.57 24 6.45 Yes 0 -1.12 No 23 0.45 Yes -43 0.72 Yes 27 74.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140002982 + NR_045720 MAN1B1 1 0.76 0.46 23 0.73 68.47 45 7.07 Yes 32 1.12 Yes 44 0.54 Yes -44 0.85 Yes 26 92.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 109027495 + NM_002372 MAN2A1 1 1.4 1.07 50 8.22 83.42 21 4.96 No 70 0.75 No 0 0 No -20 0.71 Yes 50 63.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 109051860 + NM_002372 MAN2A1 1 2.95 3.03 64 4.19 82.52 28 4.19 No 7 1.15 Yes 0 0 No -27 0.91 Yes 43 94.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 109069547 + NM_002372 MAN2A1 1 0.14 0.17 9 7.04 88.97 32 7.14 Yes 19 1.09 Yes 0 0 No -31 0.88 Yes 39 86.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 109120539 + NM_002372 MAN2A1 1 0.24 0.31 19 0.22 68.31 37 5.52 No 75 1.1 Yes 0 0 No -26 0.32 No 33 48.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 109132180 + NM_002372 MAN2A1 1 0.21 0.15 9 8.23 82.26 18 5.71 Yes 5 1.31 Yes 0 0 No -24 0.74 Yes 46 77.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 109139854 + NM_002372 MAN2A1 1 5.54 4.29 69 9.12 82.77 30 5.66 Yes 17 1.11 Yes 18 0.71 Yes -29 0.79 Yes 41 84.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 109152961 + NM_002372 MAN2A1 1 0.32 0.26 14 -3.23 59.97 21 5.2 No -3 0.09 No 21 0.54 Yes -39 0.26 No 61 28.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 109166534 + NM_002372 MAN2A1 1 1.04 0.88 35 8.11 92.04 24 5.5 No 2 1.1 Yes 0 0 No -23 0.72 Yes 47 77.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 109175655 + NM_002372 MAN2A1 1 0.25 0.22 12 11.03 94.37 36 6.32 Yes 23 2.09 Yes 0 0 No -35 0.53 No 44 62.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 109181543 + NM_002372 MAN2A1 1 0.08 0.11 7 4.49 80.82 18 4.37 No 38 0.58 No 24 0.43 Yes -32 0.33 No 46 50.42 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 109183328 + NM_002372 MAN2A1 1 0.22 0.17 8 4.05 77.86 29 4.55 No 41 1.02 Yes 31 0.67 Yes -22 0.57 No 48 70.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 109183362 + NM_002372 MAN2A1 1 0.27 0.19 13 1.05 0 37 6.56 Yes 75 1.03 Yes 0 0 No -36 0.52 No 34 77.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 109187250 + NM_002372 MAN2A1 1 0.16 0.22 12 2.52 70 45 5.9 Yes 32 0.67 No 0 0 No -33 0.6 No 37 58.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 109193439 + NM_002372 MAN2A1 1 0.13 0.14 9 5.88 81.85 38 7.13 Yes 51 1.58 Yes 0 0 No -24 0.42 No 47 43.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91449145 + NR_135504 MAN2A2 1 0.3 0.15 10 -1.47 60.48 19 4.67 No 51 -5.06 No 24 0.89 Yes -18 0.85 Yes 52 36.13 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 91449151 + NR_135504 MAN2A2 1 0.7 0.43 22 -1.51 0 9 3.87 No -4 0.34 No 24 0.89 Yes -24 0.84 Yes 46 50.92 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 91449879 + NR_135504 MAN2A2 1 0.53 0.25 15 7.61 81.23 26 7.6 Yes 13 0.63 No 0 0 No -25 0.79 Yes 45 82.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 91450418 + NR_135504 MAN2A2 1 2.49 1.44 52 5.78 81.72 35 5.76 Yes 22 1.62 Yes 34 0.53 Yes -34 0.81 Yes 36 95.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 91450587 + NR_135504 MAN2A2 1 0.58 0.36 23 6.03 82.85 15 4.52 No 60 1.08 Yes 25 0.73 Yes -19 0.47 No 51 77.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 91453445 + NR_135504 MAN2A2 1 1.46 0.72 38 -3.43 59.02 34 6.32 Yes 21 1.11 Yes 33 0.9 Yes -33 0.79 Yes 37 87.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 91453738 + NR_135504 MAN2A2 1 0.46 0.18 13 -6.66 0 17 4.12 No 14 1.58 Yes 0 0 No -26 0.72 Yes 44 87.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91454645 + NR_135504 MAN2A2 1 1.68 0.64 32 3.03 69.82 40 6.04 Yes 39 0.17 No 19 0.31 Yes -39 0.32 No 35 54.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 91459815 + NR_135504 MAN2A2 1 2.69 1.11 40 5.45 84.29 28 6.51 Yes 37 1.41 Yes 22 0.94 Yes -27 0.92 Yes 43 91.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 91461464 + NR_135504 MAN2A2 1 1.11 0.47 26 4.93 80.27 13 3.72 No 74 0.92 Yes 23 0.91 Yes -23 0.62 No 50 68.4 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 91462959 + NR_135504 MAN2A2 1 0.5 0.15 10 7.57 78.36 36 7.39 Yes 23 1.13 Yes 0 0 No -35 0.72 Yes 35 74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12758406 - NM_001173498 MAN2B1 1 0.06 0.14 10 4.68 0 14 4 No 68 1.64 Yes 22 0.94 Yes -29 0.82 Yes 41 84.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 12760986 - NM_001173498 MAN2B1 1 0.06 0.19 12 6.74 88 17 4.8 No 66 1.68 Yes 0 0 No -19 0.68 Yes 54 57.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 12763244 - NM_001173498 MAN2B1 1 1.31 4.43 72 4.78 80.42 20 6.25 Yes 0 -0.36 No 28 0.34 Yes -28 0.46 No 15 36.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 12766677 - NM_001173498 MAN2B1 1 0.17 0.47 26 2.34 77.48 25 4.12 No 33 1.5 Yes 24 0.93 Yes -41 0.74 Yes 29 81.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 12767496 - NM_001173498 MAN2B1 1 0.04 0.15 9 4.44 0 9 3.87 No 10 2.39 Yes 0 0 No -22 0.42 No 32 72.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 12767805 - NM_001173498 MAN2B1 1 0.16 0.4 22 7.27 85.85 21 5.46 No 3 0.71 No 0 0 No -27 0.77 Yes 43 85.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 12769325 - NM_001173498 MAN2B1 1 2293.02 323 72 5.53 78.91 23 6 Yes 10 1.56 Yes 22 0.93 Yes -22 0.97 Yes 48 94.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 12769325 - NM_001173498 MAN2B1 1 5.1 0.74 36 5.53 78.91 23 6 Yes 10 1.56 Yes 22 0.93 Yes -22 0.97 Yes 48 94.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 12769328 - NM_001173498 MAN2B1 1 165.67 23.18 72 5.65 79.67 20 5.74 Yes 7 1.57 Yes 22 0.93 Yes -19 0.94 Yes 51 93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 12769328 - NM_001173498 MAN2B1 1 3.29 0.42 22 5.65 79.67 20 5.74 Yes 7 1.57 Yes 22 0.93 Yes -19 0.94 Yes 51 93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 12771897 - NM_001173498 MAN2B1 1 5.52 0.72 37 4.99 82.87 23 5.16 No 50 -2.9 No 0 0 No -23 0.76 Yes 47 69.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 12772629 - NM_001173498 MAN2B1 1 0.65 2.82 67 3.62 0 26 6.16 Yes 13 0.9 Yes 0 0 No -25 0.71 Yes 45 70.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12772633 - NM_001173498 MAN2B1 1 0.04 0.15 10 0.32 83.92 22 5.83 Yes 9 0.93 Yes 0 0 No -21 0.61 No 49 62.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 12776395 - NM_001173498 MAN2B1 1 0.09 0.24 13 8.17 81.96 30 5.48 No 17 0.52 No 0 0 No -29 0.69 Yes 41 75.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 12776647 - NM_001173498 MAN2B1 1 0.1 0.36 20 0.53 64.95 37 6 Yes 50 1.14 Yes 29 0.68 Yes -29 0.47 No 34 57.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 6592567 + NM_001292038 MAN2B2 1 2.52 1.13 45 8.66 91.05 18 6.72 Yes 73 1.39 Yes 0 0 No -33 0.57 No 37 72.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 6593107 + NM_001292038 MAN2B2 1 0.39 0.18 10 4.68 68.67 34 5.92 Yes 27 0.58 No 0 0 No -28 0.84 Yes 42 87.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 6593127 + NM_001292038 MAN2B2 1 0.36 0.13 8 1.88 77.7 18 4.46 No 5 1.25 Yes 0 0 No -24 0.86 Yes 46 47.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 6596673 + NM_001292038 MAN2B2 1 0.46 0.18 13 6.44 88.32 63 8.66 Yes 50 2.36 Yes 0 0 No -22 0.39 No 48 60.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 6600422 + NM_001292038 MAN2B2 1 0.4 0.18 10 10.73 87.07 19 5.91 Yes 75 0.64 No 0 0 No -25 0.65 No 45 47.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 6603541 + NM_001292038 MAN2B2 1 0.4 0.19 12 5.19 75.55 30 6.24 Yes 52 -3.67 No 0 0 No -24 0.28 No 46 45.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 6611123 + NM_001292038 MAN2B2 1 1.4 0.65 34 5.05 73.32 32 5.35 No -4 0.68 No 27 0.62 Yes -31 0.62 No 39 69.76 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 75648722 - NM_001256494 MAN2C1 1 10.5 5.24 72 6.26 77.26 26 6.16 Yes 13 1.31 Yes 25 0.9 Yes -31 0.64 No 39 71.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 75648780 - NM_001256494 MAN2C1 1 0.33 0.17 10 3.16 0 14 4.47 No NA NA NA 0 0 No -18 0.43 No 30 55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 75648815 - NM_001256494 MAN2C1 1 3.2 1.61 51 3.73 82.56 13 5.1 No 60 0.56 No 29 0.66 Yes -19 0.54 No 51 37.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 75648848 - NM_001256494 MAN2C1 1 1.01 0.49 26 10.24 81.84 24 5.71 Yes 27 0.58 No 0 0 No -24 0.77 Yes 46 68.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 75652132 - NM_001256494 MAN2C1 1 0.19 0.13 9 3.59 69.56 26 4.41 No 54 0.66 No 20 0.86 Yes -23 0.58 No 47 62.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 75652360 - NM_001256494 MAN2C1 1 0.31 0.14 7 6.84 80.35 33 5.39 No 27 1.64 Yes 23 0.6 Yes -32 0.87 Yes 38 93.71 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 75653023 - NM_001256494 MAN2C1 1 1.07 0.4 22 -0.57 0 10 4 No 44 -3.15 No 0 0 No -26 0.64 No 44 62.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 75653567 - NM_001256494 MAN2C1 1 0.21 0.15 7 2.67 87.7 21 4.95 No 45 -3.94 No 30 0.85 Yes -20 0.75 Yes 50 76.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 75655605 - NM_001256494 MAN2C1 1 1.3 0.42 22 3.19 79.4 22 5.19 No 46 0.05 No 0 0 No -21 0.79 Yes 49 71.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 75655632 - NM_001256494 MAN2C1 1 12.44 3.83 70 -0.32 66.75 32 5.27 No 19 0.06 No 25 0.91 Yes -25 0.77 Yes 45 69.51 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 75655632 - NM_001256494 MAN2C1 1 0.79 0.25 16 -0.32 66.75 32 5.27 No 19 0.06 No 25 0.91 Yes -25 0.77 Yes 45 69.51 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 75655694 - NM_001256494 MAN2C1 1 0.68 0.17 9 -1.27 72.15 27 5.29 No 61 -2.5 No 0 0 No -26 0.8 Yes 44 96.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 75657204 - NM_001256494 MAN2C1 1 0.33 0.21 12 7.92 85.54 15 7.32 Yes 2 0.28 No 0 0 No -27 0.41 No 43 60.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 75658040 - NM_001256494 MAN2C1 1 1.84 1.1 41 5.38 93.95 28 5.29 No 15 -0.13 No 27 0.84 Yes -27 0.8 Yes 43 66.29 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 75658351 - NM_001256494 MAN2C1 1 0.71 0.4 17 8.5 91.19 22 5.74 Yes 9 1.23 Yes 21 0.96 Yes -21 0.96 Yes 49 94.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 75659987 - NM_001256494 MAN2C1 1 2.62 0.97 39 1.92 73.55 23 4.77 No 41 -2.44 No 22 0.75 Yes -22 0.57 No 37 40.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 75660319 - NM_001256494 MAN2C1 1 0.76 0.21 12 9.78 72.7 30 6.28 Yes 76 -1.32 No 27 0.49 Yes -27 0.75 Yes 43 69.09 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 75660501 - NM_001256494 MAN2C1 1 1.28 0.31 18 6.06 81.91 27 5.74 Yes NA NA NA 26 0.75 Yes -21 0.68 Yes 45 65.32 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 75660525 - NM_001256494 MAN2C1 1 0.54 0.13 8 2.61 79.72 22 4.9 No NA NA NA 26 0.75 Yes -21 0.74 Yes 49 59.89 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 103554631 - NM_005908 MANBA 1 0.24 0.14 9 0.92 0 34 6.32 Yes 63 0.66 No 0 0 No -33 0.41 No 39 52.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103554635 - NM_005908 MANBA 1 1.2 0.64 30 7.86 76.08 30 6 Yes 59 0.67 No 0 0 No -29 0.47 No 43 51.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103556031 - NM_005908 MANBA 1 0.28 0.11 8 9.07 90.89 10 5.92 Yes -3 0.24 No 0 0 No -30 0.55 No 48 54.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103556031 - NM_005908 MANBA 1 0.61 0.32 16 9.07 90.89 10 5.92 Yes -3 0.24 No 0 0 No -30 0.55 No 48 54.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103578930 - NM_005908 MANBA 1 0.59 0.15 10 3.6 71.61 44 6.74 Yes 31 1.06 Yes 0 0 No -25 0.5 No 45 68.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 103580186 - NM_005908 MANBA 1 0.28 0.11 8 12.14 82.36 60 8 Yes 55 0.98 Yes 0 0 No -59 0.8 Yes 15 68.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 103586774 - NM_005908 MANBA 1 0.55 0.31 18 8.78 88.45 31 5.66 Yes 18 0.29 No 0 0 No -30 0.61 No 40 56.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103589189 - NM_005908 MANBA 1 0.27 0.18 12 1.82 70.51 36 6.25 Yes 48 -4.35 No 0 0 No -26 0.64 No 44 59.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103591996 - NM_005908 MANBA 1 0.26 0.13 7 1.03 72 44 7.94 Yes 31 1.31 Yes 0 0 No -43 0.47 No 27 82.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 103592169 - NM_005908 MANBA 1 6.6 3.47 64 8.51 80.37 26 5.42 No 50 0.47 No 0 0 No -32 0.56 No 38 75.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 103593304 - NM_005908 MANBA 1 0.92 0.18 12 7.01 75.91 37 6.84 Yes 46 1.32 Yes 0 0 No -21 0.42 No 49 51.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 103595128 - NM_005908 MANBA 1 0.37 0.11 7 4.84 77.78 25 6.9 Yes 12 0.72 No 0 0 No -24 0.85 Yes 46 83.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103600867 - NM_005908 MANBA 1 4.94 1.42 54 3.88 89.9 23 4.69 No 75 0.65 No 0 0 No -22 0.89 Yes 48 91.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103601738 - NM_005908 MANBA 1 1.45 0.39 21 9.93 88.27 16 8.24 Yes 49 0.72 No 0 0 No -36 0.53 No 34 50.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103604040 - NM_005908 MANBA 1 1.71 0.54 28 7.11 89.97 28 5.05 No 6 0.13 No 0 0 No -27 0.74 Yes 43 73.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103612115 - NM_005908 MANBA 1 8.24 3.13 65 9.96 92.75 31 6.85 Yes 44 0.81 Yes 24 0.42 Yes -24 0.31 No 35 40.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 103612115 - NM_005908 MANBA 1 1.03 0.36 23 9.96 92.75 31 6.85 Yes 44 0.81 Yes 24 0.42 Yes -24 0.31 No 35 40.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 103616390 - NM_005908 MANBA 1 0.34 0.13 8 -0.15 71.94 59 5.85 Yes 46 1.02 Yes 0 0 No -57 0.33 No 12 65.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 103644197 - NM_005908 MANBA 1 0.27 0.15 10 0.23 76.48 22 7.36 Yes 9 1.41 Yes 0 0 No -21 0.82 Yes 33 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 103651894 - NM_005908 MANBA 1 7.64 1.69 55 8.89 81.29 20 4.83 No -3 0.32 No 0 0 No -29 0.76 Yes 41 88.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103675153 - NM_005908 MANBA 1 24.94 5.42 67 3.01 0 35 8.61 Yes 57 1.69 Yes 34 0.63 Yes -41 0.49 No 30 62.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 35925698 + NM_022077 MANBAL 1 7.26 0.4 24 -0.66 0 47 5.94 Yes 34 0.65 No 26 0.74 Yes -26 0.89 Yes 44 68.82 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 35925749 + NM_022077 MANBAL 1 12.9 0.75 36 5.9 84.09 19 5.48 No 65 -4.1 No 0 0 No -27 0.57 No 52 43.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 35929699 + NM_022077 MANBAL 1 0.97 0.35 21 -2.51 76.97 24 5.1 No 11 1.87 Yes 0 0 No -23 0.94 Yes 47 94.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35929699 + NM_022077 MANBAL 1 1.1 0.39 24 -2.51 76.97 24 5.1 No 11 1.87 Yes 0 0 No -23 0.94 Yes 47 94.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35930682 + NM_022077 MANBAL 1 2.58 1.14 44 10.54 91.5 37 8.79 Yes 24 1.23 Yes 36 0.84 Yes -37 0.53 No 34 77.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 96037778 + NM_024641 MANEA 1 0.12 0.15 8 5.12 82.13 39 6.01 Yes 26 0.37 No 0 0 No -25 0.66 No 45 76.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 51423310 + NM_006010 MANF 1 0.03 0.13 8 10.11 87.64 25 5.95 Yes -3 1.03 Yes 0 0 No -24 0.9 Yes 46 86.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51424339 + NM_006010 MANF 1 0.12 1.14 43 9.82 83.32 30 5.83 Yes 17 1.83 Yes 29 0.94 Yes -29 0.92 Yes 41 95.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 51426343 + NM_006010 MANF 1 0.01 0.11 7 -2.9 0 11 4.12 No 19 1.78 Yes 0 0 No -31 0.84 Yes 39 89.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 87426873 + NM_022818 MAP1LC3B 1 0.05 0.11 7 7.18 86.68 27 4.17 No 14 0.11 No 0 0 No -26 0.84 Yes 44 85.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 87433203 + NM_022818 MAP1LC3B 1 0.12 0.22 13 8.12 90.61 22 7.05 Yes 9 1.16 Yes 21 0.81 Yes -21 0.89 Yes 49 87.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 87436531 + NM_022818 MAP1LC3B 1 3.04 6.22 71 2.83 78.39 24 9.09 Yes 53 0.97 Yes 0 0 No -23 0.64 No 47 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17841721 + NM_001308363 MAP1S 1 0.27 0.14 9 12.59 95.65 53 8.12 Yes 40 0.91 Yes 0 0 No -44 0.69 Yes 26 87.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66745579 + NM_002755 MAP2K1 1 0.06 0.14 9 8.13 73.83 28 5.57 Yes 65 1.9 Yes 0 0 No -28 0.57 No 43 48.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 66751043 + NM_002755 MAP2K1 1 0.05 0.14 8 9.44 87.19 24 6.31 Yes 65 1.74 Yes 0 0 No -23 0.62 No 47 78.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 66760519 + NM_002755 MAP2K1 1 0.26 0.67 28 5.27 83.82 26 5.19 No 76 0.79 Yes 0 0 No -25 0.67 Yes 45 83.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66774794 + NM_002755 MAP2K1 1 0.24 0.29 15 9.41 85.42 29 5.92 Yes 69 0.24 No 0 0 No -24 0.48 No 42 64.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 66777331 + NM_002755 MAP2K1 1 0.1 0.13 9 2.31 0 31 6.23 Yes 12 0.43 No 0 0 No -24 0.59 No 46 74.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 66777363 + NM_002755 MAP2K1 1 0.09 0.13 8 2.51 82.11 15 5.48 No 2 0.59 No 0 0 No -23 0.65 No 47 55.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 4093867 - NM_030662 MAP2K2 1 0.04 0.19 12 5.18 80.25 21 5.2 No 26 0.84 Yes 0 0 No -26 0.8 Yes 44 91.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4094527 - NM_030662 MAP2K2 1 0.08 0.36 19 2.16 0 27 6.16 Yes 14 2.07 Yes 34 0.23 Yes -26 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 4095045 - NM_030662 MAP2K2 1 0.16 0.69 33 8.67 79.15 30 8.43 Yes 17 0.93 Yes 0 0 No -29 0.82 Yes 41 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4099377 - NM_030662 MAP2K2 1 0.91 2.94 68 0.74 76.87 12 5.48 No -1 -0.78 No 0 0 No -23 0.42 No 47 60.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 4099398 - NM_030662 MAP2K2 1 0.06 0.18 10 -3.47 0 19 4.24 No 76 0.18 No 0 0 No -17 0.57 No 12 58.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 4099461 - NM_030662 MAP2K2 1 0.09 0.28 17 2.54 77.06 18 4.9 No 70 1.08 Yes 0 0 No -26 0.82 Yes 44 50.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 4099782 - NM_030662 MAP2K2 1 0.35 1.08 46 7.48 83.16 27 5.71 Yes 27 -3.41 No 0 0 No -30 0.66 No 44 56.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 4100647 - NM_030662 MAP2K2 1 0.25 0.71 33 6.36 81.32 20 7.35 Yes -1 1.45 Yes 0 0 No -27 0.48 No 43 53.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 4101156 - NM_030662 MAP2K2 1 0.05 0.21 14 8.39 77.93 26 6.08 Yes -4 1.2 Yes 22 0.96 Yes -26 0.83 Yes 44 55.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 4110414 - NM_030662 MAP2K2 1 0.23 0.89 38 8.05 81.87 18 5.83 Yes 5 1.6 Yes 0 0 No -17 0.89 Yes 53 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4114119 - NM_030662 MAP2K2 1 0.09 0.32 20 6.68 71.37 21 6.26 Yes 8 0.62 No 0 0 No -20 0.82 Yes 50 89.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 4114440 - NM_030662 MAP2K2 1 0.13 0.44 23 5.59 72.58 22 5.29 No 9 1.03 Yes 0 0 No -21 0.82 Yes 49 81.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4115076 - NM_030662 MAP2K2 1 0.03 0.11 7 7.96 75.96 47 7.69 Yes 4 0.56 No 0 0 No -35 0.62 No 35 59.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 21203782 + NM_002756 MAP2K3 1 0.38 0.38 19 5.93 85.84 29 5.65 Yes 16 0.91 Yes 28 0.94 Yes -28 0.93 Yes 42 95.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 21204694 + NM_002756 MAP2K3 1 0.2 0.24 13 7.14 78.33 23 5.39 No 10 -1.97 No 0 0 No -22 0.54 No 48 56.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 21216980 + NM_002756 MAP2K3 1 0.44 0.88 33 14.41 86.67 31 6.48 Yes NA NA NA 0 0 No -31 0.49 No 49 60.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 21217461 + NM_002756 MAP2K3 1 0.14 0.29 18 -11.37 64.07 27 8.36 Yes 14 1.45 Yes 0 0 No -26 0.92 Yes 44 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 11935582 + NM_003010 MAP2K4 1 0.66 0.21 14 9.43 90.95 32 5.06 No 4 0.36 No 27 0.46 Yes -27 0.39 No 44 62.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 11969473 + NM_003010 MAP2K4 1 0.7 0.63 27 7.28 95.08 46 7.71 Yes 33 1.59 Yes 0 0 No -36 0.64 No 34 84.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 11972976 + NM_003010 MAP2K4 1 0.34 0.29 17 9.33 77.25 33 5.59 Yes 41 0.46 No 0 0 No -25 0.71 Yes 45 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 12028937 + NM_003010 MAP2K4 1 1.29 0.89 39 6.68 85.73 21 5.08 No 16 0.85 Yes 0 0 No -20 0.45 No 42 66.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 12032810 + NM_003010 MAP2K4 1 0.99 0.96 38 6.71 86.23 23 6 Yes 10 0.77 Yes 0 0 No -22 0.72 Yes 48 73.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 67838516 + NM_002757 MAP2K5 1 8.41 2.38 62 9.82 88.84 30 4.21 No 1 0.96 Yes 0 0 No -29 0.57 No 46 68.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 67880256 + NM_002757 MAP2K5 1 0.46 0.17 9 3.82 86.11 29 5.66 Yes 62 0.7 No 0 0 No -28 0.89 Yes 42 69.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 67889673 + NM_002757 MAP2K5 1 2.7 1.03 42 9.21 88.16 43 5.87 Yes 18 1.17 Yes 0 0 No -30 0.89 Yes 40 96.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 67894292 + NM_002757 MAP2K5 1 1.78 0.63 29 11.13 93.97 34 5.01 No 56 0.4 No 0 0 No -27 0.88 Yes 43 94.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 67919291 + NM_002757 MAP2K5 1 0.67 0.21 13 0.19 79.08 35 5.95 Yes 18 0.58 No 0 0 No -34 0.63 No 36 52.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 67929376 + NM_002757 MAP2K5 1 2.28 0.69 35 2.34 71.53 58 7.76 Yes 45 1.56 Yes 0 0 No -42 0.65 No 28 53.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 67933782 + NM_002757 MAP2K5 1 1.01 0.33 21 10.78 81.21 30 5.32 No 17 1.04 Yes 29 0.9 Yes -29 0.82 Yes 41 81.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 67934205 + NM_002757 MAP2K5 1 0.58 0.17 11 5.22 85.32 26 5.44 No 13 -0.76 No 0 0 No -30 0.59 No 45 52.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 67953662 + NM_002757 MAP2K5 1 0.74 0.19 13 6.21 77.25 32 8.37 Yes 19 1.81 Yes 0 0 No -31 0.81 Yes 39 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 67962757 + NM_002757 MAP2K5 1 0.31 0.1 7 6.52 78.9 24 5.44 No 26 0.34 No 23 0.79 Yes -21 0.66 No 49 68.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 67972033 + NM_002757 MAP2K5 1 2.09 0.68 31 9.11 82.22 26 5.85 Yes 9 1.38 Yes 25 0.76 Yes -25 0.67 Yes 45 67.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 68059059 + NM_002757 MAP2K5 1 0.42 0.15 8 2.49 74.37 29 7.79 Yes 16 1.12 Yes 0 0 No -28 0.88 Yes 42 94.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 68066373 + NM_002757 MAP2K5 1 0.39 0.14 7 5.14 72.7 20 4.23 No 43 -3.09 No 0 0 No -19 0.83 Yes 51 89.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 67481456 + NM_002758 MAP2K6 1 0.96 0.11 8 10.54 99.55 15 3.48 No 6 1.27 Yes 0 0 No -18 0.78 Yes 52 73.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 67528120 + NM_002758 MAP2K6 1 0.65 0.69 28 8.68 84.02 30 6.2 Yes 2 0.39 No 0 0 No -27 0.55 No 41 84.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 67529899 + NM_002758 MAP2K6 1 1.02 1.11 40 10.59 98.73 34 6.32 Yes 58 0.32 No 0 0 No -33 0.75 Yes 37 85.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 67530524 + NM_002758 MAP2K6 1 0.43 0.54 26 8.07 85.92 17 4.48 No 36 1.83 Yes 0 0 No -48 0.43 No 49 47.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 67534195 + NM_002758 MAP2K6 1 0.29 0.39 23 9.59 87.72 16 5.23 No 33 1.68 Yes 0 0 No -31 0.49 No 47 52.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7976156 + NM_001297555 MAP2K7 1 0.34 0.18 10 5.46 80.7 10 4.71 No -3 1.04 Yes 0 0 No -24 0.79 Yes 46 58.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 7976299 + NM_001297555 MAP2K7 1 5.76 3.76 68 -0.22 70.31 12 5.1 No 69 0.16 No 22 0.68 Yes -22 0.42 No 53 25.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 7977159 + NM_001297555 MAP2K7 1 1.03 0.67 34 0.93 71.87 9 3.65 No 57 1.08 Yes 24 0.92 Yes -16 0.34 No 51 30.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 56160566 + NM_005921 MAP3K1 1 0.53 0.15 8 -1.15 0 10 3.87 No 58 1.5 Yes 0 0 No -27 0.88 Yes 43 88.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40709578 + NM_002446 MAP3K10 1 3.98 0.61 34 8.34 93.86 36 5.87 Yes 46 1.04 Yes 0 0 No -24 0.6 No 46 57.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 40711311 + NM_002446 MAP3K10 1 24.61 2.29 55 6.03 84.34 26 5.1 No 13 1.42 Yes 0 0 No -25 0.78 Yes 45 85.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40711394 + NM_002446 MAP3K10 1 9.67 0.93 40 -3.79 66.4 25 5 No 16 -2.86 No 30 0.85 Yes -27 0.53 No 14 15.15 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 40711403 + NM_002446 MAP3K10 1 1.41 0.13 8 1.38 0 13 4.24 No 25 -3.42 No 30 0.85 Yes -12 0.27 No 54 30.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 40711446 + NM_002446 MAP3K10 1 4.19 0.46 23 2.57 72.77 41 6.77 Yes 68 -6.13 No 0 0 No -33 0.7 Yes 23 62.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 40719295 + NM_002446 MAP3K10 1 3.89 0.28 16 -1.11 0 20 5.1 No 37 -1.07 No 0 0 No -19 0.64 No 51 54.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65373114 - NM_002419 MAP3K11 1 2.39 1.61 57 6.97 80.98 36 5.92 Yes 71 1.08 Yes 28 0.3 Yes -21 0.75 Yes 42 52.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 65375169 - NM_002419 MAP3K11 1 0.26 0.31 19 10.57 90.65 38 7.14 Yes NA NA NA 20 0.33 Yes -37 0.51 No 33 59.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 65375235 - NM_002419 MAP3K11 1 0.69 0.78 37 8.02 82.61 21 5.58 Yes 72 0.29 No 0 0 No -27 0.7 Yes 43 71.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65376020 - NM_002419 MAP3K11 1 0.99 1.19 48 8.81 89.28 17 5.19 No 4 0.73 No 0 0 No -24 0.6 No 46 71.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 53877295 - NM_006301 MAP3K12 1 0.66 0.15 10 4.48 75.59 35 6.4 Yes 22 0.62 No 21 0.94 Yes -34 0.83 Yes 36 87.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53878113 - NM_006301 MAP3K12 1 1.2 0.22 13 7.94 79.86 26 4.45 No 41 2.01 Yes 0 0 No -30 0.55 No 45 22.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 43364430 - NM_003954 MAP3K14 1 0.15 0.11 8 6.44 73.43 44 6.56 Yes 75 0.17 No 22 0.95 Yes -36 0.68 Yes 34 67.44 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 43364727 - NM_003954 MAP3K14 1 0.47 0.39 23 -0.08 0 34 8.17 Yes -4 0.38 No 0 0 No -33 0.86 Yes 37 90.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 43389804 - NM_003954 MAP3K14 1 0.57 0.29 17 2.77 70.61 25 7.25 Yes 37 1.37 Yes 0 0 No -24 0.52 No 46 82.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128075907 - NM_006609 MAP3K2 1 0.14 0.1 7 -5.12 0 43 7.41 Yes 55 1.46 Yes 25 0.74 Yes -42 0.78 Yes 28 91.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 128079852 - NM_006609 MAP3K2 1 0.28 0.22 14 -7.31 0 15 3.99 No 28 -4.03 No 26 0.73 Yes -14 0.8 Yes 56 40.57 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 128084358 - NM_006609 MAP3K2 1 0.76 0.69 32 6.05 91.28 13 4.8 No 70 0.37 No 0 0 No -28 0.19 No 47 31.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 128089947 - NM_006609 MAP3K2 1 0.26 0.17 12 3.14 75.37 26 5.27 No 33 0.67 No 0 0 No -25 0.62 No 49 71.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 61712068 + NM_001330431 MAP3K3 1 46.1 13.81 72 4.99 84.22 25 5.1 No 12 1.78 Yes 24 0.92 Yes -24 0.92 Yes 46 94.99 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 61745505 + NM_001330431 MAP3K3 1 0.44 0.19 11 10.49 84.62 23 5.38 No 58 0.75 No 22 0.6 Yes -22 0.56 No 48 76.48 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 61757470 + NM_001330431 MAP3K3 1 0.47 0.21 12 6.28 78.99 26 6.16 Yes 45 0.14 No 0 0 No -28 0.64 No 44 52.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 61768352 + NM_001330431 MAP3K3 1 0.91 0.35 19 8.52 84.48 29 5.28 No 17 -0.91 No 28 0.85 Yes -28 0.66 No 42 68.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 161443041 + NM_001301072 MAP3K4 1 2.52 0.89 35 9.66 79.48 36 7.71 Yes 23 1.13 Yes 0 0 No -35 0.56 No 35 63.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 161462974 + NM_001301072 MAP3K4 1 0.32 0.26 17 10.99 88.27 39 6.1 Yes 30 1.16 Yes 0 0 No -38 0.87 Yes 32 81.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 161472296 + NM_001301072 MAP3K4 1 2.12 1.26 40 7.32 91.97 23 7.99 Yes 10 1.16 Yes 0 0 No -22 0.63 No 39 55.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 161488230 + NM_001301072 MAP3K4 1 0.55 0.32 18 8.04 84.35 30 5.38 No 39 1.26 Yes 24 0.48 Yes -22 0.54 No 48 60.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 161492371 + NM_001301072 MAP3K4 1 0.17 0.13 8 3.51 85.77 66 8.13 Yes 53 0.7 No 0 0 No -20 0.9 Yes 50 92.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 161495772 + NM_001301072 MAP3K4 1 0.16 0.13 8 7.02 82.24 21 4.23 No 64 -6.18 No 0 0 No -24 0.47 No 42 60.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 161507589 + NM_001301072 MAP3K4 1 0.26 0.24 14 -1.92 67.48 59 7.09 Yes -3 1.5 Yes 29 0.48 Yes -58 0.8 Yes 12 82.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 161507592 + NM_001301072 MAP3K4 1 0.22 0.19 10 -6.09 51.78 62 7.26 Yes 0 1.36 Yes 29 0.48 Yes -61 0.59 No 15 49.47 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 161508797 + NM_001301072 MAP3K4 1 0.49 0.31 16 1.58 86.32 10 4.69 No 49 -1.83 No 0 0 No -23 0.76 Yes 47 91.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 161518127 + NM_001301072 MAP3K4 1 0.23 0.14 8 1.56 70.2 11 4.99 No 37 0.6 No 0 0 No -49 0.91 Yes 21 94.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 161528933 + NM_001301072 MAP3K4 1 0.37 0.17 11 -8.95 68.89 27 5.66 Yes 63 -4.02 No 0 0 No -25 0.91 Yes 45 86.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 161529982 + NM_001301072 MAP3K4 1 5.3 3.94 67 7.55 91.39 20 4.9 No 65 1.83 Yes 19 0.83 Yes -22 0.94 Yes 48 95.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 136889208 - NM_005923 MAP3K5 1 0.16 0.21 10 9.35 72.33 34 4.19 No 50 0.76 No 0 0 No -24 0.53 No 46 72.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 136913756 - NM_005923 MAP3K5 1 6.59 8.4 72 3.47 70.35 37 5.65 Yes 13 0.45 No 32 0.5 Yes -36 0.37 No 34 55.99 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 136914242 - NM_005923 MAP3K5 1 0.11 0.13 9 10.18 94.48 29 5.37 No 62 0.75 No 0 0 No -28 0.6 No 42 59.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 136923033 - NM_005923 MAP3K5 1 0.09 0.17 12 5.26 76.81 17 5.47 No 4 0.73 No 0 0 No -22 0.94 Yes 48 95.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 136932497 - NM_005923 MAP3K5 1 1.41 1.65 51 3.5 78.32 26 6.16 Yes 35 0.35 No 0 0 No -25 0.74 Yes 45 81.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 136976819 - NM_005923 MAP3K5 1 0.31 0.36 18 6.93 87.49 24 7.52 Yes 70 -4.14 No 0 0 No -24 0.63 No 46 64.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 136988977 - NM_005923 MAP3K5 1 0.09 0.1 7 3.98 0 24 6.56 Yes 11 0.61 No 0 0 No -28 0.42 No 47 47.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 136996902 - NM_005923 MAP3K5 1 0.13 0.24 17 6.48 82.06 49 8.13 Yes 36 1.15 Yes 0 0 No -34 0.46 No 41 53.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 136998763 - NM_005923 MAP3K5 1 0.12 0.22 11 0.19 72.32 44 7.87 Yes 31 0.16 No 0 0 No -43 0.6 No 27 66.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 137015446 - NM_005923 MAP3K5 1 0.1 0.25 14 -9.31 76.04 38 6.19 Yes 43 0.32 No 0 0 No -27 0.71 Yes 43 47.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 137018522 - NM_005923 MAP3K5 1 0.14 0.39 22 1 0 101 9.36 Yes 71 0.93 Yes 0 0 No -40 0.74 Yes 30 88.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 137019859 - NM_005923 MAP3K5 1 0.11 0.28 12 8.92 86 34 5.22 No 70 0.6 No 27 0.37 Yes -31 0.47 No 39 60.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 137019890 - NM_005923 MAP3K5 1 0.33 0.82 38 -10.52 0 52 6.98 Yes 39 0.59 No 0 0 No -51 0.35 No 19 61.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 137020765 - NM_005923 MAP3K5 1 0.05 0.14 9 7.4 84.38 42 7.36 Yes 29 1.58 Yes 0 0 No -41 0.72 Yes 29 90.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 137026759 - NM_005923 MAP3K5 1 0.2 0.44 24 12.48 86.57 32 5.9 Yes 30 0.06 No 0 0 No -29 0.64 No 41 72.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 91247130 - NM_145331 MAP3K7 1 0.28 0.13 9 5.15 75.46 28 5.62 Yes 2 0.28 No 0 0 No -27 0.68 Yes 43 71.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 91252249 - NM_145331 MAP3K7 1 0.81 0.33 21 9.32 79.79 23 5.74 Yes 65 1.61 Yes 0 0 No -22 0.57 No 48 55.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 91252249 - NM_145331 MAP3K7 1 0.49 0.18 10 9.32 79.79 23 5.74 Yes 65 1.61 Yes 0 0 No -22 0.57 No 48 55.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 91256002 - NM_145331 MAP3K7 1 0.92 0.32 18 8.17 85.37 22 5.88 Yes 37 1.83 Yes 0 0 No -25 0.85 Yes 45 77.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 91260505 - NM_145331 MAP3K7 1 0.58 0.71 33 7.87 79.7 30 5.87 Yes 17 0.6 No 0 0 No -24 0.74 Yes 46 86.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 91262888 - NM_145331 MAP3K7 1 0.18 0.26 16 5.13 81.65 22 4.9 No 60 -3.05 No 0 0 No -19 0.73 Yes 51 69.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 91263302 - NM_145331 MAP3K7 1 0.54 0.6 33 1.75 0 29 6.28 Yes 60 0.2 No 0 0 No -26 0.64 No 44 75.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 91269954 - NM_145331 MAP3K7 1 4.46 4.9 70 0.56 0 14 4.36 No 43 1.05 Yes 22 0.67 Yes -40 0.88 Yes 30 80.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 91288845 - NM_145331 MAP3K7 1 0.91 0.79 38 7.34 92.96 24 5.2 No 43 0.52 No 0 0 No -23 0.71 Yes 47 57.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 91295436 - NM_145331 MAP3K7 1 0.25 0.24 12 7.79 90.82 32 4.53 No 72 -2.77 No 0 0 No -22 0.65 No 48 74.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 30725850 + NM_001320961 MAP3K8 1 2.76 0.18 10 7.7 87.11 38 6.32 Yes 4 1.4 Yes 0 0 No -33 0.51 No 37 63.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 30726104 + NM_001320961 MAP3K8 1 221.89 10.99 72 11.02 79.1 46 7.07 Yes 33 0.41 No 34 0.14 Yes -45 0.77 Yes 25 85.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 30731499 + NM_001320961 MAP3K8 1 0.19 0.11 8 1.77 72.14 20 5.67 Yes 28 0.75 No 0 0 No -23 0.6 No 47 64.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 30737544 + NM_001320961 MAP3K8 1 0.21 0.15 10 5.87 92.4 18 5.39 No 5 1.08 Yes 0 0 No -22 0.6 No 53 73.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 71202747 - NM_001284231 MAP3K9 1 14.59 2.26 55 6.08 82.5 21 7.61 Yes 8 1.48 Yes 20 0.76 Yes -20 0.61 No 50 57.02 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 47894429 - NM_002375 MAP4 1 44.94 52.81 72 9.19 81.7 89 10.03 Yes 76 2.13 Yes 26 0.39 Yes -42 0.38 No 24 38.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 47894429 - NM_002375 MAP4 1 1.65 1.96 60 9.19 81.7 89 10.03 Yes 76 2.13 Yes 26 0.39 Yes -42 0.38 No 24 38.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 47894548 - NM_002375 MAP4 1 0.12 0.15 10 -1.73 64.34 30 5.31 No 34 0.44 No 24 0.92 Yes -29 0.61 No 41 56.13 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 47896638 - NM_002375 MAP4 1 0.14 0.26 16 5.42 77.23 30 5.45 No 0 1.12 Yes 0 0 No -29 0.96 Yes 41 94.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47917316 - NM_002375 MAP4 1 1.14 3.93 68 6.14 81.05 30 4.13 No 66 0.14 No 0 0 No -23 0.43 No 47 36.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47917319 - NM_002375 MAP4 1 0.22 0.79 35 2.17 74.59 27 3.92 No 63 0.14 No 0 0 No -20 0.28 No 50 37.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47944491 - NM_002375 MAP4 1 0.43 1.63 54 9.2 90.72 26 6.49 Yes 13 0.94 Yes 0 0 No -28 0.92 Yes 42 90.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47953912 - NM_002375 MAP4 1 2.92 11.01 72 4.59 70.09 29 5.39 No 16 0.94 Yes 28 0.68 Yes -28 0.73 Yes 42 48.95 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 47957401 - NM_002375 MAP4 1 0.07 0.21 14 8.97 94.37 25 4.92 No 6 0.65 No 0 0 No -24 0.95 Yes 46 96.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47958032 - NM_002375 MAP4 1 0.14 0.39 20 7.51 82.57 22 5.15 No 38 -3.07 No 0 0 No -21 0.92 Yes 49 93.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47960242 - NM_002375 MAP4 1 0.22 0.69 38 7.11 90.46 21 5 No 8 0.69 No 0 0 No -20 0.92 Yes 50 90.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47975615 - NM_002375 MAP4 1 0.04 0.13 9 9.13 84.13 26 6.32 Yes 13 1.14 Yes 0 0 No -25 0.73 Yes 45 77.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47982025 - NM_002375 MAP4 1 2.06 7.25 70 9.6 88.5 16 6.86 Yes 51 0.63 No 0 0 No -38 0.4 No 32 35.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47982025 - NM_002375 MAP4 1 0.08 0.26 15 9.6 88.5 16 6.86 Yes 51 0.63 No 0 0 No -38 0.4 No 32 35.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 48028924 - NM_002375 MAP4 1 1.3 4.31 69 12.46 83.18 25 6.62 Yes 12 2.28 Yes 24 0.86 Yes -24 0.92 Yes 46 94.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48031662 - NM_002375 MAP4 1 0.05 0.17 10 9.22 94.39 24 6.59 Yes 11 0.45 No 0 0 No -23 0.57 No 47 71.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 48036003 - NM_002375 MAP4 1 0.29 0.97 44 7.69 81.95 20 6.99 Yes 7 1.3 Yes 0 0 No -26 0.58 No 51 48.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 48040366 - NM_002375 MAP4 1 0.38 0.6 27 3.43 0 29 4.47 No 72 -1.37 No 0 0 No -31 0.75 Yes 39 95.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48055008 - NM_002375 MAP4 1 0.41 0.6 29 10.18 89.15 18 4.4 No 5 0.87 Yes 0 0 No -22 0.65 No 48 65.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 48092866 - NM_002375 MAP4 1 0.9 1.33 54 10.95 95.2 34 6.81 Yes 35 1.13 Yes 0 0 No -33 0.63 No 37 68.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 48095780 - NM_002375 MAP4 1 0.13 0.21 11 2.34 0 44 7.42 Yes 31 1.57 Yes 0 0 No -43 0.77 Yes 27 90.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48129437 - NM_002375 MAP4 1 0.2 0.29 18 8.22 80.29 22 4.68 No 16 0.6 No 0 0 No -24 0.74 Yes 46 76.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39079866 - NM_001042600 MAP4K1 1 0.06 0.19 12 7.96 88.62 22 6.85 Yes 52 1.52 Yes 0 0 No -21 0.93 Yes 49 92.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39079916 - NM_001042600 MAP4K1 1 1.88 5.26 72 7.07 88.21 15 5.1 No 2 1.55 Yes 22 0.87 Yes -22 0.41 No 11 65.13 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 39081824 - NM_001042600 MAP4K1 1 0.14 0.38 19 2.84 0 47 6.39 Yes 34 1.87 Yes 0 0 No -32 0.9 Yes 38 90.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39083208 - NM_001042600 MAP4K1 1 0.54 1.63 47 4.1 86.59 46 6.88 Yes 33 0.64 No 0 0 No -33 0.93 Yes 37 94.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39083969 - NM_001042600 MAP4K1 1 0.06 0.15 10 1.74 0 12 4.24 No 20 0.91 Yes 0 0 No -32 0.9 Yes 38 80.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39087124 - NM_001042600 MAP4K1 1 1.64 4.29 69 2.71 71.7 39 6.15 Yes 30 1.41 Yes 0 0 No -31 0.5 No 39 50.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39087153 - NM_001042600 MAP4K1 1 0.04 0.11 8 4.51 61.96 14 4.69 No 1 1.26 Yes 28 0.74 Yes -26 0.89 Yes 44 81.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39088207 - NM_001042600 MAP4K1 1 1.12 2.38 63 5.86 78.69 17 5.66 Yes 52 1.09 Yes 0 0 No -30 0.43 No 40 46.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39096234 - NM_001042600 MAP4K1 1 0.07 0.1 7 4.44 76.11 36 6.2 Yes 76 -3.01 No 0 0 No -35 0.36 No 35 56.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39097656 - NM_001042600 MAP4K1 1 2.78 4.57 71 9.53 86.11 31 6.08 Yes 56 2 Yes 0 0 No -30 0.95 Yes 40 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39099269 - NM_001042600 MAP4K1 1 0.06 0.13 8 4.08 87 24 7.42 Yes 11 1.3 Yes 0 0 No -23 0.93 Yes 47 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39100160 - NM_001042600 MAP4K1 1 0.17 0.31 17 9.13 85.18 26 5.48 No 30 0.64 No 0 0 No -25 0.79 Yes 45 83.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39100719 - NM_001042600 MAP4K1 1 0.09 0.19 12 5.88 79.31 22 5.29 No 65 0.81 Yes 0 0 No -21 0.65 No 49 76.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 39104629 - NM_001042600 MAP4K1 1 0.08 0.26 16 -8.02 0 22 6.14 Yes 9 0.23 No 23 0.74 Yes -21 0.79 Yes 46 25.95 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 39105068 - NM_001042600 MAP4K1 1 0.22 0.61 34 -0.81 0 17 4.58 No 4 0.99 Yes 0 0 No -16 0.81 Yes 54 69.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 39105080 - NM_001042600 MAP4K1 1 1.58 4.24 68 -2.46 0 10 3.87 No 4 0.28 No 0 0 No -37 0.56 No 33 37.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39105151 - NM_001042600 MAP4K1 1 0.18 0.47 24 -0.45 65.67 20 5.1 No 73 2.37 Yes 31 0.52 Yes -19 0.56 No 51 36.81 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 39105168 - NM_001042600 MAP4K1 1 0.09 0.28 16 3.61 68.8 69 11.08 Yes 56 2.41 Yes 31 0.52 Yes -35 0.49 No 35 78.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 39106735 - NM_001042600 MAP4K1 1 0.89 2.26 62 10.56 89.11 33 8.87 Yes 20 1.26 Yes 0 0 No -32 0.96 Yes 38 96.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39108328 - NM_001042600 MAP4K1 1 0.62 1.49 52 3.17 78.91 13 5.2 No 0 0.36 No 0 0 No -20 0.42 No 58 44.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64557095 - NM_001307990 MAP4K2 1 0.21 0.31 21 -2.74 75.32 20 6.61 Yes 37 1.47 Yes 0 0 No -25 0.65 No 28 52.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 64557280 - NM_001307990 MAP4K2 1 0.72 0.83 35 -2.26 0 17 4.24 No 71 -0.8 No 24 0.93 Yes -16 0.53 No 59 62.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 64560198 - NM_001307990 MAP4K2 1 0.13 0.18 10 7.78 82.34 58 7.25 Yes 28 0.54 No 0 0 No -46 0.58 No 30 55.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64563888 - NM_001307990 MAP4K2 1 0.29 0.5 22 5.23 73.77 26 5.66 Yes 13 0.8 Yes 27 0.46 Yes -25 0.89 Yes 45 81.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64564181 - NM_001307990 MAP4K2 1 0.61 0.76 40 -4.35 0 34 7.24 Yes 14 2.18 Yes 0 0 No -33 0.54 No 37 69.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 64564385 - NM_001307990 MAP4K2 1 0.13 0.17 11 6.13 79.76 25 5.59 Yes 54 0.39 No 21 0.58 Yes -24 0.49 No 46 73.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 64564521 - NM_001307990 MAP4K2 1 0.39 0.44 24 -1.99 0 17 4.58 No 64 -4.67 No 20 0.86 Yes -14 0.69 Yes 56 65.03 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 64564665 - NM_001307990 MAP4K2 1 861.55 84.1 72 6.09 86.55 22 5.1 No 67 -3.7 No 21 0.79 Yes -19 0.77 Yes 51 81.46 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64569067 - NM_001307990 MAP4K2 1 0.3 0.26 15 10.95 91.05 21 5.57 Yes -3 0.65 No 0 0 No -20 0.62 No 50 71.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 64569970 - NM_001307990 MAP4K2 1 0.16 0.21 12 5.75 77.48 23 6.4 Yes 10 1.49 Yes 21 0.82 Yes -22 0.92 Yes 48 90.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 64569970 - NM_001307990 MAP4K2 1 0.47 0.54 25 5.75 77.48 23 6.4 Yes 10 1.49 Yes 21 0.82 Yes -22 0.92 Yes 48 90.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 39481687 - NM_003618 MAP4K3 1 4.98 0.49 27 3.98 77.52 29 4.83 No 8 0.42 No 23 0.84 Yes -28 0.94 Yes 42 97.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 39509693 - NM_003618 MAP4K3 1 1.03 0.14 10 2.57 80.44 28 5.66 Yes 15 0.49 No 0 0 No -24 0.6 No 46 62.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 39515398 - NM_003618 MAP4K3 1 0.84 0.13 8 6.04 90.56 21 5.18 No 8 1.06 Yes 0 0 No -26 0.72 Yes 44 66.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 102413769 + NM_004834 MAP4K4 1 0.3 0.14 9 12.44 89.33 31 5.92 Yes 18 0.25 No 0 0 No -30 0.69 Yes 40 85.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 102477286 + NM_004834 MAP4K4 1 50.37 7.85 71 9.63 88.15 35 5.9 Yes 22 1.36 Yes 28 0.76 Yes -34 0.72 Yes 36 92.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 102487955 + NM_004834 MAP4K4 1 70.06 15.79 72 10.97 94.45 28 4.01 No 75 -3.79 No 23 0.57 Yes -25 0.44 No 45 41.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 50891425 - NM_198794 MAP4K5 1 0.67 0.32 20 4.74 84.41 27 9.54 Yes 14 1.65 Yes 0 0 No -26 0.78 Yes 44 81.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50895975 - NM_198794 MAP4K5 1 1.69 0.83 38 0.7 0 27 5.78 Yes 14 1.87 Yes 0 0 No -26 0.43 No 44 54.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50901780 - NM_198794 MAP4K5 1 0.44 0.26 14 2.01 0 43 6.58 Yes 39 0.01 No 0 0 No -42 0.88 Yes 28 78.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50915602 - NM_198794 MAP4K5 1 0.2 0.11 8 -4.31 71.61 78 9.79 Yes 65 1.6 Yes 0 0 No -23 0.48 No 48 23.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50919975 - NM_198794 MAP4K5 1 3.47 1.92 61 5.43 80.41 40 7.1 Yes 27 1.44 Yes 0 0 No -39 0.66 No 31 84.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 50923035 - NM_198794 MAP4K5 1 0.26 0.18 12 7.06 92.68 16 7.1 Yes 7 0.7 No 0 0 No -27 0.67 Yes 44 72.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50928080 - NM_198794 MAP4K5 1 0.58 0.42 23 9.61 88.75 30 5.87 Yes 74 1.39 Yes 0 0 No -29 0.77 Yes 41 85.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50949491 - NM_198794 MAP4K5 1 0.27 0.24 14 1.99 82.42 51 7.38 Yes 38 1.01 Yes 0 0 No -51 0.6 No 20 78.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 50986345 - NM_198794 MAP4K5 1 0.25 0.14 10 3.3 87.6 15 4.31 No 2 1.28 Yes 0 0 No -59 0.47 No 11 45.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50986369 - NM_198794 MAP4K5 1 0.33 0.17 11 1.76 83.04 53 7.6 Yes 40 1.15 Yes 0 0 No -42 0.42 No 28 68.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36626964 + NM_018067 MAP7D1 1 0.68 0.18 9 7.39 85.82 18 6.48 Yes 5 2.33 Yes 0 0 No -21 0.66 No 49 52.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36642303 + NM_018067 MAP7D1 1 1.07 0.36 20 0.96 0 9 3.87 No 32 2.81 Yes 22 0.37 Yes -44 0.7 Yes 26 91.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 36644046 + NM_018067 MAP7D1 1 6.35 1.74 57 6.92 74.71 14 6 Yes 41 1.46 Yes 29 0.46 Yes -29 0.54 No 43 66.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 36644071 + NM_018067 MAP7D1 1 0.8 0.21 12 2.57 64.18 34 5.83 Yes 26 1.59 Yes 33 0.85 Yes -33 0.58 No 37 64.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 36644525 + NM_018067 MAP7D1 1 0.17 0.25 16 -8.21 0 22 6.4 Yes 24 -0.38 No 0 0 No -21 0.89 Yes 49 86.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36645115 + NM_018067 MAP7D1 1 782.65 169.78 72 4.03 79.21 24 6 Yes 11 2.07 Yes 20 0.93 Yes -23 0.82 Yes 47 82.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 36645851 + NM_018067 MAP7D1 1 0.66 1.15 45 2.16 77.74 31 7.28 Yes 18 2.5 Yes 0 0 No -30 0.93 Yes 40 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 135310855 - NM_001173517 MAP7D3 1 0.35 0.18 10 0.37 68.68 32 5.15 No 62 -5.73 No 0 0 No -24 0.49 No 53 45.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 135312750 - NM_001173517 MAP7D3 1 7.02 2.99 69 7.37 95.98 33 5.99 Yes 73 0.6 No 0 0 No -32 0.75 Yes 38 79.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 135314254 - NM_001173517 MAP7D3 1 0.18 0.1 7 -0.91 51.97 56 7.83 Yes 63 -1.26 No 0 0 No -29 0.54 No 58 20.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 135314374 - NM_001173517 MAP7D3 1 0.47 0.19 14 3.15 0 13 3.86 No 27 1.31 Yes 0 0 No -39 0.7 Yes 31 88.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 135316320 - NM_001173517 MAP7D3 1 0.27 0.13 7 9.78 92.68 58 8.3 Yes 45 1.6 Yes 0 0 No -44 0.64 No 26 75.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 135327903 - NM_001173517 MAP7D3 1 0.65 0.19 13 4.33 88.13 28 5.58 Yes 15 0.98 Yes 0 0 No -27 0.74 Yes 43 89.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 156297023 - NM_001039580 MAP9 1 8.69 0.47 20 1.81 79.77 22 3.65 No 52 1.07 Yes 0 0 No -21 0.91 Yes 49 89.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 22118552 - NM_002745 MAPK1 1 0.11 0.21 13 3.79 76.41 40 9.23 Yes 1 1.43 Yes 24 0.88 Yes -22 0.6 No 31 60.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 22123215 - NM_002745 MAPK1 1 0.36 0.6 35 7.98 92.53 32 6.11 Yes 19 0.15 No 0 0 No -31 0.74 Yes 39 64.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 22127087 - NM_002745 MAPK1 1 0.13 0.22 13 5.53 73.47 17 5.64 Yes 68 0.48 No 0 0 No -25 0.47 No 45 66.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 22139455 - NM_002745 MAPK1 1 0.27 0.81 37 -9.14 76.63 17 6.15 Yes 4 0.96 Yes 0 0 No -26 0.78 Yes 44 66.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 22141079 - NM_002745 MAPK1 1 0.05 0.17 9 7.98 86.87 32 6.55 Yes 19 2.3 Yes 0 0 No -31 0.62 No 39 67.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 22146774 - NM_002745 MAPK1 1 0.19 0.26 13 0.83 64.89 21 4.9 No 55 0.86 Yes 0 0 No -20 0.84 Yes 50 87.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 22160592 - NM_002745 MAPK1 1 0.58 1.6 53 2.77 0 15 4.36 No 2 0.79 Yes 0 0 No -29 0.58 No 56 65.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 22199087 - NM_002745 MAPK1 1 0.25 0.32 20 6.34 76.87 26 6.47 Yes 13 1.56 Yes 0 0 No -25 0.68 Yes 45 80.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 22207614 - NM_002745 MAPK1 1 0.15 0.19 11 8.24 92.41 38 6.6 Yes 25 0.95 Yes 0 0 No -37 0.67 Yes 38 75.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50704048 - NM_002751 MAPK11 1 1 0.18 9 2.18 71.31 27 5.74 Yes 64 -0.35 No 0 0 No -26 0.56 No 44 66.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50704051 - NM_002751 MAPK11 1 0.88 0.1 7 6.06 77.32 24 5.48 No 61 -0.34 No 0 0 No -23 0.5 No 47 69.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 50704718 - NM_002751 MAPK11 1 0.46 0.11 8 -8.81 0 12 3.87 No -1 0.65 No 0 0 No -11 0.83 Yes 59 45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50692913 - NM_002969 MAPK12 1 0.63 0.18 11 3.25 80.12 21 6.16 Yes 8 1.2 Yes 0 0 No -20 0.84 Yes 50 89.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50692916 - NM_002969 MAPK12 1 1.06 0.33 16 5.2 85.02 18 5.92 Yes 5 1.23 Yes 0 0 No -17 0.6 No 53 83.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 50693316 - NM_002969 MAPK12 1 0.37 0.1 7 2.03 84.84 23 4.8 No 69 -5.86 No 0 0 No -22 0.87 Yes 48 67.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50694325 - NM_002969 MAPK12 1 5.47 1.79 48 -5.38 0 15 4.12 No 19 1.16 Yes 19 0.98 Yes -31 0.95 Yes 39 89.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50694333 - NM_002969 MAPK12 1 0.73 0.22 14 -6.68 66.78 24 8.19 Yes 11 1.19 Yes 19 0.98 Yes -23 0.97 Yes 47 94.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50694335 - NM_002969 MAPK12 1 0.57 0.17 10 3.51 0 22 8.06 Yes 9 1.19 Yes 19 0.98 Yes -21 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 50696043 - NM_002969 MAPK12 1 1.07 0.19 13 9.14 84.12 36 6.16 Yes 23 1.82 Yes 0 0 No -35 0.92 Yes 35 94.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50696090 - NM_002969 MAPK12 1 8.24 1.72 45 3.21 72.46 37 7.14 Yes 24 0.98 Yes 36 0.73 Yes -36 0.73 Yes 34 80.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50696571 - NM_002969 MAPK12 1 2.99 0.72 31 8.14 89.85 21 5.98 Yes 24 -1.38 No 0 0 No -21 0.71 Yes 49 75.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50699386 - NM_002969 MAPK12 1 6.68 1.9 50 6.43 80.08 26 5.08 No NA NA NA 0 0 No -26 0.62 No 44 51.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36040822 + NM_139012 MAPK14 1 0.1 0.14 9 13.28 83.18 41 4.45 No 28 0.56 No 33 0.66 Yes -40 0.41 No 38 29.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 36041469 + NM_139012 MAPK14 1 0.08 0.11 8 -21.5 0 28 5.76 Yes 15 1.42 Yes 0 0 No -27 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 36043597 + NM_139012 MAPK14 1 0.59 0.99 42 -0.35 0 12 4.24 No 57 0.26 No 21 0.04 Yes -60 0.2 No 23 41.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 36045611 + NM_139012 MAPK14 1 0.22 0.19 14 8.5 88.12 57 7.61 Yes 8 1.47 Yes 0 0 No -24 0.91 Yes 46 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36067964 + NM_139012 MAPK14 1 60.03 49.57 72 -6.01 0 15 4.24 No 63 1.35 Yes 26 0.72 Yes -14 0.37 No 56 55.17 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 36067955 + NM_139012 MAPK14 1 0.13 0.1 7 4.74 70.86 45 7.11 Yes 54 1.35 Yes 26 0.72 Yes -17 0.3 No 32 37.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 36068028 + NM_139012 MAPK14 1 0.3 0.25 12 10 87.27 33 6.08 Yes 20 1.41 Yes 0 0 No -32 0.86 Yes 38 89.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36071354 + NM_139012 MAPK14 1 0.21 0.29 18 1 74.2 26 6.43 Yes 25 1.5 Yes 0 0 No -25 0.53 No 45 77.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 55520453 + NM_144578 MAPK1IP1L 1 0.08 0.28 16 11.53 87.26 20 6.24 Yes 7 2.31 Yes 0 0 No -19 0.6 No 45 68.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 55520917 + NM_144578 MAPK1IP1L 1 0.68 2.1 66 2.11 84.41 42 5.87 Yes 29 1.26 Yes 0 0 No -30 0.46 No 40 73.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 55524734 + NM_144578 MAPK1IP1L 1 0.69 2.24 60 10.43 83.5 34 4.05 No 10 0.24 No 0 0 No -33 0.43 No 48 43.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 55527715 + NM_144578 MAPK1IP1L 1 0.09 0.28 17 2.91 71.77 39 4.85 No 6 0.33 No 0 0 No -22 0.75 Yes 48 57.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 55529342 + NM_144578 MAPK1IP1L 1 0.15 0.58 34 1.89 0 10 4 No 38 1.09 Yes 0 0 No -33 0.53 No 45 58.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 55529304 + NM_144578 MAPK1IP1L 1 0.19 0.76 36 6.97 79.02 13 5.87 Yes 0 1.15 Yes 26 0.53 Yes -28 0.61 No 40 59.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 55529462 + NM_144578 MAPK1IP1L 1 0.03 0.11 7 5.21 83.85 22 4.8 No 9 0.55 No 0 0 No -21 0.81 Yes 49 85.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 55530569 + NM_144578 MAPK1IP1L 1 0.08 0.33 17 4.95 85.16 23 4.64 No 10 1.22 Yes 22 0.8 Yes -27 0.74 Yes 43 80.86 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30126967 - NM_002746 MAPK3 1 6.52 2.85 67 10.5 86.46 13 5.38 No 0 1.5 Yes 25 0.76 Yes -25 0.33 No 45 48.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 52312677 + NM_002748 MAPK6 1 0.17 0.22 13 5.25 75.32 26 4.82 No 13 1.28 Yes 0 0 No -29 0.49 No 38 65.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 52319835 + NM_002748 MAPK6 1 1.75 2.19 58 11.28 92.63 23 5.63 Yes 28 1.65 Yes 23 0.75 Yes -28 0.62 No 42 79.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 52334950 + NM_002748 MAPK6 1 1.73 2.32 58 7.67 83.5 27 6.29 Yes 14 1 Yes 0 0 No -26 0.97 Yes 44 96.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52335980 + NM_002748 MAPK6 1 0.19 0.24 11 3.03 0 43 7.36 Yes 30 1.15 Yes 0 0 No -42 0.7 Yes 28 72.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52337768 + NM_002748 MAPK6 1 0.29 0.38 17 5.55 82.85 40 5.37 No 60 2.06 Yes 0 0 No -31 0.39 No 43 29.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 52345294 + NM_002748 MAPK6 1 0.04 0.11 7 3.01 0 35 6.97 Yes 22 0.79 Yes 0 0 No -34 0.97 Yes 36 97.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 19283796 + NM_002749 MAPK7 1 3.83 0.78 31 3.09 72.5 36 5.28 No 16 0.99 Yes 28 0.8 Yes -35 0.64 No 35 53.61 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 49628170 + NM_001278548 MAPK8 1 0.2 0.15 10 5.49 72.69 32 5.66 Yes 30 0.8 Yes 25 0.64 Yes -31 0.69 Yes 39 60.43 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 49628245 + NM_001278548 MAPK8 1 0.27 0.19 9 3.01 74.06 33 5.17 No 53 0.39 No 0 0 No -28 0.67 Yes 42 54.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 49634426 + NM_001278548 MAPK8 1 0.77 0.44 26 0.03 0 23 7.48 Yes 74 -6.92 No 0 0 No -22 0.68 Yes 48 69.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 49642926 + NM_001278548 MAPK8 1 42.06 14.9 72 3.01 0 29 7.07 Yes 16 1.11 Yes 23 0.85 Yes -28 0.62 No 37 68.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 1782039 + NM_001040439 MAPK8IP3 1 2.05 0.35 21 7.3 78.62 41 6.86 Yes 50 -0.97 No 0 0 No -38 0.79 Yes 32 53.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 1810293 + NM_001040439 MAPK8IP3 1 0.96 0.32 14 8.06 92.17 22 5 No 9 1.48 Yes 21 0.98 Yes -21 0.86 Yes 49 95.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 1815402 + NM_001040439 MAPK8IP3 1 0.67 0.24 13 8.81 84.99 11 6.08 Yes 60 -0.88 No 0 0 No -30 0.81 Yes 40 83.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 1815935 + NM_001040439 MAPK8IP3 1 0.53 0.18 11 4.57 86.3 24 5.1 No 30 -0.1 No 21 0.97 Yes -22 0.81 Yes 48 83.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 1816264 + NM_001040439 MAPK8IP3 1 3.72 0.67 31 -2.51 74.57 24 4.06 No 38 0.87 Yes 0 0 No -23 0.73 Yes 47 30.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 179663527 - NM_139069 MAPK9 1 562.22 78.14 72 1.47 0 33 4.77 No 20 0.42 No 27 0.85 Yes -32 0.55 No 38 77.12 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 179663527 - NM_139069 MAPK9 1 5.4 0.71 36 1.47 0 33 4.77 No 20 0.42 No 27 0.85 Yes -32 0.55 No 38 77.12 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 179677702 - NM_139069 MAPK9 1 0.22 0.25 16 8.13 86.65 45 7.58 Yes 32 1.12 Yes 0 0 No -32 0.52 No 38 67.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 179680678 - NM_139069 MAPK9 1 0.16 0.19 12 9.46 83.07 29 6.48 Yes 16 1.67 Yes 28 0.93 Yes -28 0.98 Yes 42 95.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179691838 - NM_139069 MAPK9 1 0.1 0.1 7 -7.75 0 18 4.98 No 24 0.69 No 0 0 No -28 0.33 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179707037 - NM_139069 MAPK9 1 11.21 11.72 72 10.59 94.53 68 6.33 Yes 6 0.81 Yes 28 0.68 Yes -28 0.51 No 42 55.29 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 179714068 - NM_139069 MAPK9 1 21.03 2.6 69 11.06 99.17 36 6.16 Yes 23 1.44 Yes 35 0.83 Yes -35 0.68 Yes 35 79.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128202133 - NM_001006617 MAPKAP1 1 0.03 0.13 9 6.95 86.03 24 5.89 Yes 73 2.02 Yes 0 0 No -37 0.64 No 33 69.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 128203707 - NM_001006617 MAPKAP1 1 0.24 1 41 6.77 79.43 41 7.54 Yes 0 2.21 Yes 0 0 No -40 0.84 Yes 30 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128206894 - NM_001006617 MAPKAP1 1 0.05 0.24 11 0.44 71.71 25 3.66 No 48 -3.44 No 23 0.91 Yes -20 0.85 Yes 50 86.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128213387 - NM_001006617 MAPKAP1 1 0.03 0.11 7 5.67 88.1 26 5.13 No 16 -3.11 No 28 0.23 Yes -26 0.57 No 45 66.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 128221993 - NM_001006617 MAPKAP1 1 0.06 0.22 12 3.69 84.22 35 8.27 Yes 3 1.45 Yes 0 0 No -34 0.8 Yes 36 88.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128233517 - NM_001006617 MAPKAP1 1 0.05 0.17 10 8.57 89.97 37 6.56 Yes NA NA NA 29 0.49 Yes -29 0.8 Yes 41 80.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128240462 - NM_001006617 MAPKAP1 1 0.76 2.83 64 11.39 82.03 25 7.27 Yes 12 1.23 Yes 24 0.67 Yes -24 0.53 No 46 73.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 128244732 - NM_001006617 MAPKAP1 1 0.03 0.13 8 9.79 83.17 47 6.31 Yes 30 0.47 No 0 0 No -46 0.58 No 24 83.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 128284045 - NM_001006617 MAPKAP1 1 6.61 21.21 72 12.83 90.21 38 4.23 No 18 1.17 Yes 30 0.88 Yes -30 0.97 Yes 40 95.57 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128287572 - NM_001006617 MAPKAP1 1 0.14 0.46 24 6.13 80.59 63 5.07 No 3 1.13 Yes 0 0 No -22 0.29 No 49 39.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 128305417 - NM_001006617 MAPKAP1 1 0.08 0.35 17 8.58 90.95 21 6.32 Yes 72 1.35 Yes 0 0 No -20 0.88 Yes 50 90.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128312589 - NM_001006617 MAPKAP1 1 0.04 0.18 10 10.7 86.61 29 4.85 No 54 1.5 Yes 0 0 No -28 0.94 Yes 42 94.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128322857 - NM_001006617 MAPKAP1 1 0.07 0.19 11 2.92 0 55 7.27 Yes 42 1.03 Yes 0 0 No -26 0.81 Yes 44 58.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 128328017 - NM_001006617 MAPKAP1 1 0.16 0.5 27 12.04 100 33 6.42 Yes 20 2.17 Yes 32 0.63 Yes -32 0.67 Yes 38 85.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128345756 - NM_001006617 MAPKAP1 1 0.04 0.13 7 6.17 90.63 19 3.63 No 6 0.32 No 0 0 No -22 0.95 Yes 48 95.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 128362207 - NM_001006617 MAPKAP1 1 0.07 0.35 23 3.31 78.01 22 5.2 No 9 0.45 No 21 0.75 Yes -21 0.8 Yes 49 79.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128414537 - NM_001006617 MAPKAP1 1 0.08 0.4 22 7.2 87.59 32 6.02 Yes 19 0.04 No 32 0.51 Yes -32 0.5 No 44 68.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 128418592 - NM_001006617 MAPKAP1 1 0.04 0.21 11 4.66 69.35 58 7.48 Yes 45 1.23 Yes 0 0 No -57 0.7 Yes 13 61.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 128419192 - NM_001006617 MAPKAP1 1 0.05 0.24 14 10.84 86.86 24 5.18 No 57 1.89 Yes 0 0 No -23 0.52 No 47 65.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 128420074 - NM_001006617 MAPKAP1 1 0.03 0.14 8 -0.1 0 41 4.57 No 28 0.44 No 0 0 No -37 0.88 Yes 33 92.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 128427244 - NM_001006617 MAPKAP1 1 0.06 0.35 20 10.76 95.8 26 4.56 No 37 0.12 No 0 0 No -25 0.8 Yes 46 78.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 128432207 - NM_001006617 MAPKAP1 1 0.16 0.64 27 3.03 70.46 45 7.28 Yes 11 0.9 Yes 24 0.94 Yes -29 0.68 Yes 41 86.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128432207 - NM_001006617 MAPKAP1 1 0.03 0.11 8 3.03 70.46 45 7.28 Yes 11 0.9 Yes 24 0.94 Yes -29 0.68 Yes 41 86.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128434820 - NM_001006617 MAPKAP1 1 1.36 3.08 69 4.99 70.03 44 5.91 Yes 66 -4.53 No 0 0 No -21 0.63 No 49 73.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 128434919 - NM_001006617 MAPKAP1 1 0.08 0.17 9 3.03 0 61 7.8 Yes 44 0.62 No 0 0 No -34 0.78 Yes 36 82.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 128453893 - NM_001006617 MAPKAP1 1 0.1 0.22 14 10.97 83.02 31 7.07 Yes 71 1.92 Yes 0 0 No -30 0.79 Yes 40 80.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128467600 - NM_001006617 MAPKAP1 1 0.62 1.42 52 8.42 81.48 24 5.42 No 11 0.51 No 0 0 No -23 0.73 Yes 47 74.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 206871288 + NM_004759 MAPKAPK2 1 0.07 0.18 9 6.74 79.56 29 5.52 No 64 1.94 Yes 0 0 No -28 0.82 Yes 42 92.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 206880419 + NM_004759 MAPKAPK2 1 0.13 0.31 17 14.82 91.2 27 5.66 Yes 48 -2.65 No 0 0 No -25 0.95 Yes 45 94.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 206900397 + NM_004759 MAPKAPK2 1 0.15 0.33 20 8.44 86.83 35 7.91 Yes 22 1.32 Yes 0 0 No -34 0.88 Yes 36 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 206902743 + NM_004759 MAPKAPK2 1 0.39 1.26 45 0.95 67.24 57 6.98 Yes 12 1.88 Yes 0 0 No -24 0.84 Yes 14 61.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 206903345 + NM_004759 MAPKAPK2 1 0.15 0.51 27 2.55 71.29 26 5.65 Yes 13 0.35 No 0 0 No -25 0.7 Yes 17 64.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 206904989 + NM_004759 MAPKAPK2 1 0.11 0.39 25 -2.65 0 44 6.25 Yes 24 1.48 Yes 0 0 No -33 0.49 No 34 71.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 206905017 + NM_004759 MAPKAPK2 1 0.07 0.24 14 -0.76 72.54 32 5.55 No 52 1.46 Yes 0 0 No -22 0.92 Yes 48 56.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 206905150 + NM_004759 MAPKAPK2 1 2.16 6.33 71 -1.39 76.25 20 4.69 No 35 1.11 Yes 19 0.95 Yes -19 0.9 Yes 51 90.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 206905550 + NM_004759 MAPKAPK2 1 1.38 0.39 22 9.8 91.41 34 5.67 Yes 72 0.6 No 0 0 No -27 0.54 No 43 49.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 206905919 + NM_004759 MAPKAPK2 1 757.68 242.99 72 7.89 82.54 146 12.18 Yes 64 2.44 Yes 28 0.58 Yes -51 0.44 No 42 46.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 50683610 + NM_001243926 MAPKAPK3 1 0.25 0.19 13 0.6 65.33 26 5.87 Yes 42 1.39 Yes 29 0.14 Yes -28 0.56 No 16 41.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 50685327 + NM_001243926 MAPKAPK3 1 0.23 0.13 7 -7.44 78.42 38 6.08 Yes 25 1.73 Yes 0 0 No -30 0.62 No 40 83.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112308078 + NM_139078 MAPKAPK5 1 1.22 0.72 32 3.16 0 37 5.07 No 24 0.33 No 0 0 No -21 0.71 Yes 49 62.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 112308486 + NM_139078 MAPKAPK5 1 0.35 0.39 21 12.39 90.89 22 6.71 Yes 9 0.26 No 0 0 No -21 0.6 No 49 55.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112311189 + NM_139078 MAPKAPK5 1 0.12 0.14 9 5.15 89.45 28 5.15 No 52 0.53 No 0 0 No -27 0.75 Yes 43 58.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 112320497 + NM_139078 MAPKAPK5 1 0.14 0.17 10 6.92 91.24 14 5.1 No 40 0.86 Yes 0 0 No -22 0.65 No 51 78.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112320593 + NM_139078 MAPKAPK5 1 0.63 0.74 37 11.66 88.3 24 5.48 No 62 -2.84 No 23 0.67 Yes -27 0.66 Yes 43 62.24 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 112326231 + NM_139078 MAPKAPK5 1 0.37 0.29 17 9.75 78.16 25 5.57 Yes 12 0.78 Yes 0 0 No -24 0.52 No 46 65.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112326295 + NM_139078 MAPKAPK5 1 1.08 0.86 41 -1.82 0 25 5.1 No 12 1.37 Yes 0 0 No -24 0.93 Yes 46 93.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112328243 + NM_139078 MAPKAPK5 1 0.72 0.65 29 4.02 76.08 22 7.06 Yes 69 -5.47 No 0 0 No -37 0.5 No 33 46.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112328275 + NM_139078 MAPKAPK5 1 2.47 2.28 62 1.47 76.33 23 4.69 No 57 -3.15 No 0 0 No -22 0.8 Yes 50 43.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 112277808 - NR_015404 MAPKAPK5-AS1 1 28.57 9.76 72 8.5 84.33 31 4.97 No 72 0.02 No 30 0.85 Yes -30 0.67 Yes 39 63.02 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 112277847 - NR_015404 MAPKAPK5-AS1 1 0.41 0.14 10 1.63 72.96 62 8.27 Yes 33 0.02 No 22 0.54 Yes -22 0.46 No 17 57.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 42067459 + NR_049762 MAPKBP1 1 1.34 0.19 12 2.31 68.89 28 5.7 Yes 76 -5.52 No 24 0.5 Yes -24 0.69 Yes 46 42.21 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 42109589 + NR_049762 MAPKBP1 1 0.95 0.32 21 2.19 0 9 5.83 Yes 29 -1.02 No 0 0 No -27 0.84 Yes 43 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42110997 + NR_049762 MAPKBP1 1 0.54 0.14 8 7.19 82.17 23 5.36 No 72 0.02 No 25 0.85 Yes -26 0.65 No 45 75.94 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 42113035 + NR_049762 MAPKBP1 1 0.84 0.19 12 -2.34 0 12 3.87 No 46 1 Yes 0 0 No -53 0.93 Yes 17 94.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42113854 + NR_049762 MAPKBP1 1 0.71 0.21 11 -0.86 70.79 52 6.19 Yes 39 0.79 Yes 0 0 No -30 0.56 No 40 67.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 42113856 + NR_049762 MAPKBP1 1 1.46 0.47 26 -7.08 73.62 54 6.3 Yes 41 0.78 Yes 0 0 No -32 0.51 No 38 60.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 42114799 + NR_049762 MAPKBP1 1 0.53 0.13 8 -5.35 0 12 3.21 No 7 0.74 No 0 0 No -31 0.86 Yes 39 93.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42114804 + NR_049762 MAPKBP1 1 2.79 0.6 34 -1.72 0 10 4.32 No 12 0.41 No 29 0.52 Yes -36 0.85 Yes 34 93.04 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31412511 + NM_012325 MAPRE1 1 0.06 0.21 13 8.69 80.79 29 5.74 Yes 44 0.99 Yes 0 0 No -28 0.81 Yes 42 94.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 31413702 + NM_012325 MAPRE1 1 0.11 0.39 20 3.09 75.99 49 6.63 Yes 17 1.09 Yes 34 0.74 Yes -24 0.69 Yes 46 68.53 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 31413733 + NM_012325 MAPRE1 1 1.62 5.94 71 3.03 69.95 38 6.32 Yes 30 1.3 Yes 0 0 No -37 0.9 Yes 33 93.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 31424499 + NM_012325 MAPRE1 1 0.07 0.46 24 3.82 78.05 24 5.03 No 69 0.89 Yes 0 0 No -23 0.78 Yes 47 76.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 31436447 + NM_012325 MAPRE1 1 0.02 0.18 8 0.01 73.46 23 4.9 No 41 -4.9 No 32 0.73 Yes -22 0.96 Yes 48 98.25 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31436481 + NM_012325 MAPRE1 1 0.02 0.17 9 -2.81 0 20 5.24 No 7 0.89 Yes 0 0 No -36 0.89 Yes 34 92.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 32707328 + NM_001143826 MAPRE2 1 0.2 0.11 7 10.5 85.29 30 5.95 Yes 35 0.05 No 0 0 No -29 0.75 Yes 41 86.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 8503241 + NM_016496 MARCH2 1 1.12 0.49 29 -1.89 70.82 28 5.98 Yes 58 -2.16 No 20 0.92 Yes -36 0.46 No 37 48.54 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 8503258 + NM_016496 MARCH2 1 0.36 0.17 10 5.81 88.29 27 5.1 No 75 -2.15 No 20 0.92 Yes -53 0.43 No 26 32.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 126234959 - NM_178450 MARCH3 1 4.86 0.89 41 9.84 95.68 61 8.88 Yes 48 1.49 Yes 27 0.72 Yes -27 0.87 Yes 43 87.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 126253369 - NM_178450 MARCH3 1 1.6 0.19 13 7.74 88.43 30 7.53 Yes 17 0.56 No 0 0 No -29 0.82 Yes 41 84.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 94060673 + NM_017824 MARCH5 1 0.32 0.19 13 3.23 0 30 6.85 Yes 17 1.77 Yes 0 0 No -29 0.84 Yes 41 91.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 94093226 + NM_017824 MARCH5 1 3.67 2.47 64 7.61 81.26 31 4.91 No 32 0.06 No 18 0.55 Yes -30 0.73 Yes 40 77.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 10355065 + NM_005885 MARCH6 1 0.08 0.1 7 4.6 84.59 22 5.05 No 9 0.99 Yes 0 0 No -21 0.54 No 49 66.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 10376353 + NM_005885 MARCH6 1 0.18 0.24 15 -3.17 0 18 4.1 No 61 0.81 Yes 0 0 No -17 0.78 Yes 13 45.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 10381923 + NM_005885 MARCH6 1 0.04 0.11 7 4.65 0 17 4.58 No 76 0.96 Yes 0 0 No -35 0.69 Yes 35 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10385291 + NM_005885 MARCH6 1 0.19 0.4 20 5.45 93.49 22 4.99 No 9 0.16 No 0 0 No -21 0.92 Yes 49 80.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 10390460 + NM_005885 MARCH6 1 0.16 0.14 9 0.8 77 22 5.09 No 53 0.67 No 0 0 No -21 0.53 No 27 46.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 10393373 + NM_005885 MARCH6 1 0.05 0.1 7 7.09 85.23 31 5.74 Yes 18 1.25 Yes 0 0 No -30 0.87 Yes 40 95.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10401571 + NM_005885 MARCH6 1 0.13 0.33 19 6.72 72.48 30 5.46 No 27 0.92 Yes 0 0 No -23 0.68 Yes 41 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10402657 + NM_005885 MARCH6 1 0.08 0.14 7 2.04 73.03 21 3.44 No 20 1.51 Yes 0 0 No -20 0.75 Yes 50 78.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 10404682 + NM_005885 MARCH6 1 0.25 0.47 27 8.17 76.62 26 4.67 No 76 0.8 Yes 0 0 No -26 0.51 No 42 39.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 10413367 + NM_005885 MARCH6 1 0.14 0.25 16 6.31 81.57 40 6.26 Yes 27 0.66 No 24 0.88 Yes -33 0.76 Yes 31 72.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 10413386 + NM_005885 MARCH6 1 0.24 0.43 22 10.84 83.17 26 4.45 No 9 1.11 Yes 0 0 No -25 0.59 No 45 73.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 10414546 + NM_005885 MARCH6 1 0.06 0.13 9 -12.42 0 30 5.05 No 56 0.9 Yes 0 0 No -29 0.84 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 10415584 + NM_005885 MARCH6 1 0.83 1.78 54 5.41 81.24 27 5.37 No 73 0.54 No 26 0.88 Yes -26 0.69 Yes 48 63.08 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 10418787 + NM_005885 MARCH6 1 0.13 0.25 14 11.63 92.55 35 5.41 No 65 -2.08 No 0 0 No -34 0.6 No 36 59.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 160608885 + NM_001282807 MARCH7 1 0.1 0.24 16 -6.84 0 12 4.24 No 60 -4.69 No 31 0.26 Yes -33 0.42 No 50 30.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 160617027 + NM_001282807 MARCH7 1 0.06 0.1 7 6.74 89.65 33 5.02 No 74 1.24 Yes 0 0 No -26 0.76 Yes 44 77.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 160619387 + NM_001282807 MARCH7 1 0.09 0.18 12 1.04 0 49 8.77 Yes 36 1.92 Yes 44 0.61 Yes -41 0.66 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 160623402 + NM_001282807 MARCH7 1 0.34 0.67 33 1.24 65.97 57 8.51 Yes 44 1.59 Yes 0 0 No -22 0.57 No 14 65.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 45953725 - NM_001282866 MARCH8 1 0.33 0.22 13 5.48 88.83 74 6.49 Yes 75 -3.22 No 0 0 No -24 0.63 No 46 86.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 45955326 - NM_001282866 MARCH8 1 0.77 0.43 22 0.44 62.59 55 8.13 Yes 42 0.57 No 0 0 No -54 0.75 Yes 16 94.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 45976107 - NM_001282866 MARCH8 1 2.49 1.46 47 9.92 88.51 19 6.73 Yes 6 0.9 Yes 0 0 No -26 0.86 Yes 44 89.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 45980382 - NM_001282866 MARCH8 1 4.77 3.14 66 8.31 87.03 25 6.35 Yes 12 2.03 Yes 0 0 No -24 0.87 Yes 46 90.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 45980622 - NM_001282866 MARCH8 1 0.42 0.22 14 7.35 80.18 39 6.15 Yes -3 0.49 No 0 0 No -27 0.44 No 39 69.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 45980734 - NM_001282866 MARCH8 1 0.41 0.28 14 13.19 98.91 23 5.74 Yes 10 1.02 Yes 0 0 No -22 0.84 Yes 48 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 58151073 + NM_138396 MARCH9 1 26.67 5.93 71 6.21 88.27 36 6.13 Yes 39 1.17 Yes 0 0 No -23 0.88 Yes 47 92.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 58151679 + NM_138396 MARCH9 1 0.84 0.19 13 6.34 90.25 24 4.9 No 66 -4.23 No 0 0 No -23 0.78 Yes 47 75.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 114180830 + NM_002356 MARCKS 1 0.05 0.19 13 3.12 73.89 41 6.86 Yes 54 -1.12 No 26 0.85 Yes -25 0.5 No 45 18.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 114180861 + NM_002356 MARCKS 1 0.09 0.28 20 -5.28 70.44 30 6.32 Yes 17 1.96 Yes 0 0 No -29 0.85 Yes 41 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63657693 + NM_017490 MARK2 1 5.34 0.4 23 10.36 86.52 39 6.2 Yes 71 -0.09 No 29 0.1 Yes -48 0.55 No 22 67.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 63663055 + NM_017490 MARK2 1 0.81 0.72 36 1.64 0 33 6.55 Yes 20 0.08 No 0 0 No -32 0.91 Yes 38 95.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 63665791 + NM_017490 MARK2 1 0.58 0.67 33 10.2 86.26 37 5.74 Yes 24 0.22 No 0 0 No -23 0.6 No 47 68.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 63666527 + NM_017490 MARK2 1 0.57 0.67 35 3.31 0 26 6.92 Yes 13 1.84 Yes 0 0 No -25 0.87 Yes 45 91.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63670072 + NM_017490 MARK2 1 11.48 8.26 72 4.72 79.36 29 7.27 Yes 16 1.44 Yes 28 0.94 Yes -28 0.81 Yes 42 91.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 63673559 + NM_017490 MARK2 1 4.13 3.64 65 10.49 86.91 74 8.05 Yes 61 1.17 Yes 30 0.79 Yes -30 0.74 Yes 40 56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 103865287 + NM_001128921 MARK3 1 0.59 0.81 40 9.37 94.56 26 5.66 Yes 52 -3.35 No 0 0 No -30 0.69 Yes 40 70.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 103877981 + NM_001128921 MARK3 1 0.4 0.46 23 0.82 80.31 40 6.97 Yes 27 1.81 Yes 0 0 No -39 0.85 Yes 31 95.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103879784 + NM_001128921 MARK3 1 0.11 0.11 7 1.32 84.41 28 5.65 Yes 60 0.68 No 0 0 No -27 0.49 No 43 79.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 103879788 + NM_001128921 MARK3 1 0.54 0.53 24 3.01 0 32 5.99 Yes 64 0.68 No 0 0 No -31 0.54 No 39 80.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 103895529 + NM_001128921 MARK3 1 0.14 0.17 10 6.96 79.97 23 5.87 Yes 49 0.41 No 22 0.7 Yes -20 0.64 No 48 64.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 103904361 + NM_001128921 MARK3 1 0.18 0.24 14 3.28 0 35 6.08 Yes 22 0.62 No 0 0 No -34 0.63 No 40 71.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 103907806 + NM_001128921 MARK3 1 0.11 0.15 10 5.5 85.02 20 5.53 No 7 1.29 Yes 19 0.64 Yes -19 0.61 No 51 83.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 103917454 + NM_001128921 MARK3 1 0.1 0.13 7 6.62 84.11 22 5.74 Yes 9 0.9 Yes 0 0 No -21 0.76 Yes 49 89.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103921655 + NM_001128921 MARK3 1 0.49 0.72 31 9.32 82.77 39 6.79 Yes 26 1.46 Yes 0 0 No -25 0.71 Yes 45 53.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 103925063 + NM_001128921 MARK3 1 0.32 0.51 26 8.17 91.16 25 5.88 Yes 31 0.81 Yes 33 0.74 Yes -33 0.71 Yes 37 83.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 103934417 + NM_001128921 MARK3 1 40.54 34.61 72 4.9 79.64 18 5.29 No 48 0.8 Yes 24 0.94 Yes -24 0.63 No 46 69.84 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 103934422 + NM_001128921 MARK3 1 1.06 0.89 45 -0.32 0 23 5.74 Yes 53 0.79 Yes 0 0 No -29 0.59 No 41 58.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 103946725 + NM_001128921 MARK3 1 0.06 0.1 7 -12.82 78.54 33 5.56 Yes 52 0.09 No 0 0 No -27 0.39 No 44 50.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 103946773 + NM_001128921 MARK3 1 1.17 1.71 55 3.66 84.61 27 7 Yes 14 0.58 No 0 0 No -26 0.65 No 44 64.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 103953715 + NM_001128921 MARK3 1 0.21 0.31 20 8.84 85.64 32 3.74 No 60 0.84 Yes 0 0 No -31 0.44 No 42 23.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 45762722 + NM_031417 MARK4 1 1.14 0.54 27 6.41 78.47 23 5.39 No 71 -4.36 No 0 0 No -22 0.81 Yes 48 85.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 45780714 + NM_031417 MARK4 1 0.29 0.1 7 10.07 88.27 26 4.99 No 59 0.64 No 0 0 No -26 0.77 Yes 44 78.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57883210 + NM_004990 MARS 1 0.2 0.6 30 -0.07 0 27 7.62 Yes 14 2.07 Yes 33 0.72 Yes -26 0.69 Yes 44 74.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57883237 + NM_004990 MARS 1 0.37 1.08 49 5.1 72.56 34 5.98 Yes 41 2.06 Yes 33 0.72 Yes -33 0.58 No 41 64.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57883681 + NM_004990 MARS 1 0.04 0.14 10 -16.48 52.77 48 5.7 Yes 35 0.91 Yes 0 0 No -39 0.91 Yes 31 96.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57884323 + NM_004990 MARS 1 0.06 0.13 9 -5.49 75.7 28 5.83 Yes 76 1.87 Yes 0 0 No -27 0.66 No 43 54.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 57887759 + NM_004990 MARS 1 0.08 0.29 14 9.33 88.27 22 11 Yes 9 0.6 No 0 0 No -21 0.45 No 49 47.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57894125 + NM_004990 MARS 1 0.05 0.17 12 -1.12 0 19 4.58 No 45 2.2 Yes 33 0.25 Yes -57 0.67 Yes 13 58.07 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 57894128 + NM_004990 MARS 1 0.05 0.17 10 1.14 80.72 22 4.9 No 48 2.2 Yes 33 0.25 Yes -21 0.85 Yes 49 61.51 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 57898010 + NM_004990 MARS 1 0.03 0.17 12 -3.02 73.02 32 6.71 Yes 72 1.65 Yes 0 0 No -31 0.89 Yes 39 91.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57899799 + NM_004990 MARS 1 0.06 0.19 13 0.26 71.28 27 5.13 No 0 0.62 No 0 0 No -26 0.95 Yes 44 95.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57906085 + NM_004990 MARS 1 1.01 3.15 68 5.64 85.55 18 4.89 No 70 1.77 Yes 24 0.72 Yes -22 0.75 Yes 53 71.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57908701 + NM_004990 MARS 1 0.08 0.36 20 9.22 82.71 28 5.66 Yes 44 1.9 Yes 27 0.68 Yes -27 0.5 No 43 53.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57909898 + NM_004990 MARS 1 0.06 0.18 13 9.17 85.93 49 7.35 Yes 36 2.23 Yes 27 0.95 Yes -48 0.65 No 22 77.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 57909921 + NM_004990 MARS 1 0.07 0.18 12 7.8 73.23 28 4.14 No 59 2.22 Yes 27 0.95 Yes -27 0.86 Yes 43 96.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46278120 + NM_001324320 MAST2 1 3.22 0.42 23 10.62 88.27 28 5.67 Yes 15 1.29 Yes 0 0 No -28 0.7 Yes 42 80.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46295341 + NM_001324320 MAST2 1 1.32 0.64 30 14.08 92.08 31 8.09 Yes 31 0.8 Yes 0 0 No -25 0.62 No 45 59.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 46348038 + NM_001324320 MAST2 1 2.75 1.43 53 3.85 85.78 28 7.27 Yes 15 1.29 Yes 0 0 No -27 0.73 Yes 43 86.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46365544 + NM_001324320 MAST2 1 0.46 0.25 13 7.21 85.05 23 6.17 Yes 64 0.34 No 0 0 No -29 0.52 No 41 62.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46376711 + NM_001324320 MAST2 1 0.83 0.44 21 11.61 93.09 36 5.54 No 46 0.63 No 0 0 No -31 0.59 No 39 80.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 46383010 + NM_001324320 MAST2 1 3.5 1.86 58 4.22 78.76 35 7.2 Yes 22 2.52 Yes 34 0.89 Yes -34 0.78 Yes 36 89.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46397894 + NM_001324320 MAST2 1 0.32 0.19 12 11.11 84.26 16 6.28 Yes 3 1.48 Yes 0 0 No -26 0.95 Yes 44 97.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46497934 + NM_001324320 MAST2 1 0.22 0.13 9 0.91 73.08 22 6.07 Yes 25 0.37 No 0 0 No -21 0.37 No 42 57.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46497937 + NM_001324320 MAST2 1 1.2 0.6 26 5.61 91.32 25 6.27 Yes 28 0.35 No 0 0 No -24 0.58 No 46 63.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46499452 + NM_001324320 MAST2 1 0.51 0.28 17 -4.56 0 13 4.36 No NA NA NA 28 0.91 Yes -7 0.52 No 63 46.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 46499747 + NM_001324320 MAST2 1 8.42 3.64 70 3.03 78.1 20 5.32 No 7 1.48 Yes 0 0 No -27 0.87 Yes 43 91.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46500498 + NM_001324320 MAST2 1 5.34 2.08 64 7.73 84.17 23 5.62 Yes 67 0.71 No 24 0.91 Yes -22 0.86 Yes 48 88.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18221461 + NM_015016 MAST3 1 17.06 3.35 66 10.36 90.51 27 6.24 Yes 14 1.47 Yes 26 0.96 Yes -26 0.96 Yes 44 96.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18232662 + NM_015016 MAST3 1 61.9 11.99 72 6.86 87.66 30 5.65 Yes 17 2.56 Yes 0 0 No -29 0.79 Yes 41 89.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18240621 + NM_015016 MAST3 1 0.6 0.33 16 2.24 77.35 34 6.42 Yes 43 -4.17 No 0 0 No -33 0.54 No 47 59.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18248284 + NM_015016 MAST3 1 0.44 0.19 13 4.64 72.8 21 3.75 No 50 -0.82 No 0 0 No -20 0.46 No 50 66.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18250035 + NM_015016 MAST3 1 0.2 0.14 7 8.91 86.04 25 7.63 Yes 42 1.45 Yes 0 0 No -24 0.86 Yes 46 79.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27448947 + NM_001320757 MASTL 1 1.1 1.15 48 2.99 0 35 7.15 Yes 22 0.14 No 0 0 No -34 0.86 Yes 36 91.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 27452576 + NM_001320757 MASTL 1 0.15 0.15 8 3.28 0 31 5.96 Yes 62 0.89 Yes 0 0 No -34 0.61 No 40 71.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 27456095 + NM_001320757 MASTL 1 0.31 0.31 19 5.21 82.05 19 5.73 Yes 6 1.82 Yes 0 0 No -18 0.5 No 43 60.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 27456605 + NM_001320757 MASTL 1 0.15 0.1 7 8.41 86.65 96 7.58 Yes 20 0.71 No 0 0 No -32 0.82 Yes 38 87.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 27462049 + NM_001320757 MASTL 1 117.97 38.15 72 4.1 82.91 40 6.19 Yes 57 0.83 Yes 25 0.7 Yes -21 0.35 No 31 57.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 27470556 + NM_001320757 MASTL 1 0.35 0.19 12 10.6 93.04 31 7.32 Yes 18 0.94 Yes 0 0 No -30 0.7 Yes 40 73.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27470556 + NM_001320757 MASTL 1 2.86 1.68 57 10.6 93.04 31 7.32 Yes 18 0.94 Yes 0 0 No -30 0.7 Yes 40 73.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27475309 + NM_001320757 MASTL 1 0.24 0.14 9 -5.83 78.92 37 5.01 No 27 0.43 No 0 0 No -31 0.63 No 39 72.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 85768210 + NM_005911 MAT2A 1 0.03 0.15 11 -0.18 0 29 5.57 Yes 16 0.69 No 0 0 No -28 0.87 Yes 42 89.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 85768378 + NM_005911 MAT2A 1 0.02 0.11 7 -13.3 0 32 5.35 No 7 0.44 No 0 0 No -24 0.74 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 85768534 + NM_005911 MAT2A 1 0.06 0.31 18 11.53 90.79 22 5.47 No 0 0.98 Yes 0 0 No -24 0.78 Yes 46 87.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85770089 + NM_005911 MAT2A 1 0.3 1.49 50 4.04 77.54 42 7.33 Yes 29 1.36 Yes 0 0 No -41 0.86 Yes 29 90.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85770682 + NM_005911 MAT2A 1 0.02 0.13 8 4.76 82.6 29 6.24 Yes 16 1.26 Yes 0 0 No -28 0.85 Yes 42 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 162940573 + NM_013283 MAT2B 1 0.11 0.51 26 2.08 68.45 22 4.67 No 54 1.28 Yes 0 0 No -22 0.75 Yes 48 78.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 162940826 + NM_013283 MAT2B 1 0.66 1.42 53 2.67 64.8 23 5.6 Yes 50 -5.06 No 25 0.9 Yes -22 0.64 No 48 67.13 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 138650366 + NM_001194955 MATR3 1 0.05 0.42 23 -23.03 69.37 29 5.67 Yes 7 1.12 Yes 0 0 No -28 0.75 Yes 42 81.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 138651393 + NM_001194955 MATR3 1 0.02 0.13 8 -1.55 0 12 4.09 No 16 0.48 No 0 0 No -35 0.58 No 35 69.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 138651417 + NM_001194955 MATR3 1 0.02 0.14 9 0.84 71.95 13 5.72 Yes 40 0.44 No 24 0.46 Yes -59 0.4 No 12 48.06 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 138651749 + NM_001194955 MATR3 1 0.01 0.11 7 -4.63 0 56 8.16 Yes 30 0.63 No 25 0.84 Yes -20 0.36 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 138651765 + NM_001194955 MATR3 1 0.01 0.11 7 -2.7 0 72 8.73 Yes 46 0.62 No 0 0 No -26 0.52 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 138657664 + NM_001194955 MATR3 1 0.03 0.31 16 4.49 92.21 22 4.8 No 20 1.32 Yes 0 0 No -21 0.85 Yes 49 66.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 138660984 + NM_001194955 MATR3 1 8.67 73.79 72 9.27 87.91 20 5.48 No 7 0.5 No 25 0.81 Yes -25 0.74 Yes 45 86.25 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 138661857 + NM_001194955 MATR3 1 0.36 1.93 56 -2 0 9 3.87 No 42 0.39 No 0 0 No -36 0.51 No 40 49.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 138665034 + NM_001194955 MATR3 1 0.01 0.13 8 -11.23 0 33 5.77 Yes 6 1.12 Yes 0 0 No -28 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 19434340 + NM_015329 MAU2 1 0.3 0.13 7 1.36 0 29 4.29 No 39 0.2 No 0 0 No -28 0.89 Yes 42 90.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19447294 + NM_015329 MAU2 1 0.18 0.11 8 8.63 86.79 21 7.21 Yes 8 1.3 Yes 0 0 No -20 0.83 Yes 50 92.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19453608 + NM_015329 MAU2 1 0.85 0.56 32 6.99 85.27 22 5.65 Yes 39 1.91 Yes 0 0 No -21 0.64 No 49 67.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19455604 + NM_015329 MAU2 1 0.21 0.13 8 4.31 80.04 37 6 Yes 24 0.76 No 0 0 No -29 0.59 No 34 73.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 3835582 + NM_020746 MAVS 1 0.14 0.18 10 5.59 87.44 20 4.62 No 7 0.63 No 0 0 No -19 0.59 No 45 42.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 3839465 + NM_020746 MAVS 1 0.58 0.57 30 11.65 88.27 62 8.03 Yes 55 0.47 No 0 0 No -44 0.59 No 26 72.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 3846309 + NM_020746 MAVS 1 0.29 0.26 18 1.36 0 18 4.36 No 75 -1.02 No 22 0.61 Yes -18 0.29 No 53 67.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 3854440 + NM_020746 MAVS 1 0.48 0.46 23 2.85 74.33 28 6.38 Yes 15 0.47 No 0 0 No -28 0.59 No 43 63.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 65544147 - NR_073137 MAX 1 0.94 2.15 59 7.53 82.58 27 7.5 Yes 14 1.67 Yes 26 0.96 Yes -26 0.96 Yes 44 96.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 65544362 - NR_073137 MAX 1 0.11 0.26 10 7.68 83.56 25 7.35 Yes 12 2.3 Yes 24 0.94 Yes -24 0.85 Yes 46 87.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 29819751 + NM_001042539 MAZ 1 0.34 1.93 59 7.55 81.16 64 8.33 Yes 51 1.85 Yes 0 0 No -22 0.77 Yes 48 69.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 29819891 + NM_001042539 MAZ 1 0.03 0.19 14 -9.99 0 32 7.2 Yes 76 1.84 Yes 0 0 No -31 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 29819917 + NM_001042539 MAZ 1 0.12 0.68 33 0.02 79.02 21 4.8 No 45 1.63 Yes 0 0 No -20 0.86 Yes 13 63.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 29820406 + NM_001042539 MAZ 1 0.06 0.14 9 4 83.29 19 4.61 No 55 -3.8 No 0 0 No -22 0.49 No 48 61.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 74138532 - NM_138441 MB21D1 1 1.31 1.46 49 -2.18 58.04 37 6.48 Yes 24 0.64 No 0 0 No -36 0.53 No 34 61.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 74143590 - NM_138441 MB21D1 1 0.38 0.35 20 4.13 77.35 24 4.38 No 8 0.94 Yes 0 0 No -23 0.5 No 47 68.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 74150163 - NM_138441 MB21D1 1 0.85 0.78 36 -2.73 0 13 3.79 No 29 0.48 No 0 0 No -41 0.86 Yes 29 93.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 74154894 - NM_138441 MB21D1 1 0.11 0.11 8 8.14 79.92 32 8.9 Yes 8 0.38 No 0 0 No -31 0.47 No 47 37.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 47799322 - NM_001204140 MBD1 1 0.11 0.14 9 0.88 0 33 7.67 Yes 20 1.65 Yes 0 0 No -32 0.93 Yes 38 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 47799541 - NM_001204140 MBD1 1 0.16 0.21 11 6.29 86.46 23 5.2 No 10 1.45 Yes 0 0 No -22 0.94 Yes 48 94.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 47799615 - NM_001204140 MBD1 1 0.08 0.1 7 4.61 82.97 31 4.33 No 65 0.81 Yes 0 0 No -27 0.77 Yes 43 72.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 47799797 - NM_001204140 MBD1 1 23.55 17.88 72 6.25 83.5 25 5.57 Yes 12 0.1 No 24 0.91 Yes -24 0.86 Yes 46 80.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 47800721 - NM_001204140 MBD1 1 12.7 2.21 60 3.89 75.16 32 6 Yes 19 0.78 Yes 28 0.93 Yes -31 0.7 Yes 39 62.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 47800724 - NM_001204140 MBD1 1 270.51 48.1 72 4.63 77.34 29 5.74 Yes 16 0.77 Yes 28 0.93 Yes -28 0.75 Yes 42 62.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 47800724 - NM_001204140 MBD1 1 2.39 0.4 21 4.63 77.34 29 5.74 Yes 16 0.77 Yes 28 0.93 Yes -28 0.75 Yes 42 62.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 47802277 - NM_001204140 MBD1 1 1.75 2.07 58 8.42 82.94 40 6.4 Yes 27 0.25 No 0 0 No -39 0.7 Yes 31 85.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 47803567 - NM_001204140 MBD1 1 0.55 0.67 36 2.23 0 17 4.12 No 18 1.7 Yes 22 0.95 Yes -30 0.85 Yes 40 89.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 51681367 - NM_003927 MBD2 1 0.02 0.19 13 9.21 86.31 27 6.08 Yes 14 0.85 Yes 0 0 No -26 0.95 Yes 44 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 51686267 - NM_003927 MBD2 1 0.05 0.43 24 -4.45 0 13 3.95 No 23 1.05 Yes 0 0 No -35 0.96 Yes 35 97.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 51714208 - NM_003927 MBD2 1 1.15 11.11 72 10.09 98.31 26 5.1 No 25 0.12 No 19 0.3 Yes -19 0.74 Yes 51 79.55 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 51714225 - NM_003927 MBD2 1 0.22 2.15 60 4.71 74.16 21 5.13 No 8 0.1 No 19 0.3 Yes -20 0.67 Yes 50 76.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 51714334 - NM_003927 MBD2 1 0.07 0.63 33 7.36 82.23 37 6.82 Yes 24 1.67 Yes 0 0 No -36 0.63 No 34 72.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 51721907 - NM_003927 MBD2 1 0.03 0.29 17 9.61 89.51 32 4.26 No 55 0.63 No 0 0 No -27 0.63 No 43 55.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 51729497 - NM_003927 MBD2 1 0.02 0.22 13 7.18 86.06 66 5.34 No 33 1.92 Yes 32 0.75 Yes -32 0.59 No 38 44.94 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 1578156 - NM_001281454 MBD3 1 0.57 1.5 48 0.68 80.34 29 5.48 No 16 1.5 Yes 0 0 No -28 0.73 Yes 42 63.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1578534 - NM_001281454 MBD3 1 0.66 1.58 53 -4.28 0 28 5.39 No 15 1.17 Yes 0 0 No -27 0.86 Yes 43 86.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1579331 - NM_001281454 MBD3 1 0.08 0.18 12 7.83 95.39 29 5.48 No 64 -1.53 No 0 0 No -28 0.57 No 42 66.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 129152977 - NM_001276271 MBD4 1 1.87 1.08 48 3.83 78.11 27 4.47 No 68 0.78 Yes 25 0.22 Yes -29 0.75 Yes 41 90.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 129156041 - NM_001276271 MBD4 1 0.43 0.36 21 5.79 77.38 23 4.69 No 58 1.1 Yes 0 0 No -22 0.79 Yes 48 66.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 129156262 - NM_001276271 MBD4 1 0.28 0.25 12 7.31 83.5 41 3.87 No 13 0.52 No 0 0 No -28 0.78 Yes 45 70.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 129156789 - NM_001276271 MBD4 1 0.13 0.14 9 -1.95 0 30 4.82 No 10 0.17 No 0 0 No -29 0.65 No 44 63.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 129157750 - NM_001276271 MBD4 1 0.69 0.74 33 4.64 84.17 22 4.51 No 68 -2.89 No 0 0 No -26 0.72 Yes 44 70.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 148782534 + NM_018328 MBD5 1 55.68 11.28 72 6.38 81.32 27 6.05 Yes 14 2.18 Yes 26 0.89 Yes -26 0.82 Yes 44 84.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 148798774 + NM_018328 MBD5 1 4.47 0.88 44 8.75 82.73 26 7.12 Yes 13 1.44 Yes 25 0.82 Yes -25 0.87 Yes 45 93.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 148811501 + NM_018328 MBD5 1 9.98 2.17 60 9.64 96.56 81 8.62 Yes 76 1.42 Yes 0 0 No -46 0.64 No 24 78.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 148811959 + NM_018328 MBD5 1 42.51 9.4 71 8.7 84.57 39 4.62 No 61 0.21 No 24 0.69 Yes -24 0.78 Yes 46 78.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 148969339 + NM_018328 MBD5 1 0.35 0.15 9 6.73 90.66 38 4.31 No 71 0.66 No 0 0 No -22 0.41 No 48 38.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 148977515 + NM_018328 MBD5 1 1.24 0.57 25 8.58 80.15 28 5.57 Yes 21 0.06 No 27 0.83 Yes -27 0.89 Yes 43 83.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 148986162 + NM_018328 MBD5 1 0.64 0.33 18 9.65 88.97 41 7.09 Yes 17 1.06 Yes 0 0 No -29 0.88 Yes 41 80.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149067698 + NM_018328 MBD5 1 0.92 0.21 14 10.14 88.97 32 7.22 Yes 19 1.16 Yes 0 0 No -31 0.77 Yes 39 70.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149008347 + NM_018328 MBD5 1 4.34 1.14 46 10.01 91.22 30 5.73 Yes 17 0.43 No 0 0 No -29 0.85 Yes 41 90.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 149067698 + NM_018328 MBD5 1 8.95 2.36 64 10.14 88.97 32 7.22 Yes 19 1.16 Yes 0 0 No -31 0.77 Yes 39 70.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149070487 + NM_018328 MBD5 1 0.67 0.19 11 6.94 90 24 4.9 No 11 1.22 Yes 0 0 No -23 0.94 Yes 47 94.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149088051 + NM_018328 MBD5 1 0.65 0.19 11 8.8 88.62 16 5.65 Yes 3 0.36 No 0 0 No -28 0.83 Yes 42 76.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 149098543 + NM_018328 MBD5 1 1.74 0.44 27 9.56 87 18 4.42 No 30 1 Yes 0 0 No -31 0.43 No 39 51.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 149103590 + NM_018328 MBD5 1 10.34 2.71 64 6.24 86.49 27 6.47 Yes 14 1.66 Yes 0 0 No -26 0.75 Yes 44 87.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149150869 + NM_018328 MBD5 1 0.85 0.22 15 9.83 86.69 32 5.66 Yes 27 0.8 Yes 0 0 No -26 0.77 Yes 44 89.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149158161 + NM_018328 MBD5 1 1.36 0.36 17 9.12 91.61 29 5.26 No 70 0.1 No 0 0 No -33 0.43 No 39 55.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 149197327 + NM_018328 MBD5 1 4.96 1.04 42 11.15 88.27 32 8.31 Yes 29 1.61 Yes 0 0 No -31 0.92 Yes 39 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 149259965 + NM_018328 MBD5 1 5.46 0.22 13 8.23 85.36 24 5.83 Yes 60 0.15 No 30 0.66 Yes -23 0.6 No 46 52.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 57920093 + NM_052897 MBD6 1 3.67 1.67 54 9.19 84.84 39 5.46 No 51 1.32 Yes 32 0.66 Yes -30 0.53 No 38 75.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 57921926 + NM_052897 MBD6 1 17.27 6.61 72 2.45 91.83 25 5.03 No 12 1.07 Yes 24 0.95 Yes -24 0.84 Yes 46 89.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57922651 + NM_052897 MBD6 1 1.24 1.11 46 6.47 69.52 32 5.07 No 75 0.72 No 0 0 No -23 0.26 No 47 44.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57922946 + NM_052897 MBD6 1 0.23 0.21 14 0.81 0 37 7.12 Yes 24 1.51 Yes 0 0 No -36 0.6 No 34 85.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 36768394 - NM_016586 MBIP 1 15.63 15.22 72 3.91 81.19 35 5.83 Yes 18 0.21 No 31 0.8 Yes -34 0.71 Yes 36 79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 36774511 - NM_016586 MBIP 1 0.99 1.03 42 7.41 86.02 15 4.8 No 2 1.07 Yes 20 0.52 Yes -24 0.53 No 46 65.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 36782643 - NM_016586 MBIP 1 0.26 0.26 15 5.12 78.41 50 8.46 Yes 11 2.07 Yes 0 0 No -23 0.53 No 47 83.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 36784143 - NM_016586 MBIP 1 1.32 0.81 37 0.47 76.17 18 4.75 No 73 0.65 No 26 0.47 Yes -38 0.74 Yes 32 79.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 36784158 - NM_016586 MBIP 1 0.18 0.11 7 3.53 80.43 24 4.88 No 62 0.72 No 26 0.47 Yes -23 0.8 Yes 47 87.83 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 152017993 + NM_001314057 MBNL1 1 7.22 0.88 34 -0.04 57.69 100 8.96 Yes 20 -2.55 No 0 0 No -28 0.48 No 42 67.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 152052902 + NM_001314057 MBNL1 1 1.62 0.29 15 -1.27 71.32 36 7.07 Yes 23 1.69 Yes 0 0 No -35 0.74 Yes 35 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 152137524 + NM_001314057 MBNL1 1 0.37 2.4 63 6.34 81.6 10 7.89 Yes 57 1.23 Yes 0 0 No -59 0.65 No 11 50.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 152155152 + NM_001314057 MBNL1 1 0.03 0.15 10 5.76 81.72 13 7.07 Yes 0 1.49 Yes 0 0 No -31 0.7 Yes 39 89.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 152165513 + NM_001314057 MBNL1 1 7.97 6.56 72 7.01 78.44 27 6.4 Yes 14 0.76 No 26 0.88 Yes -26 0.9 Yes 44 83.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 152165513 + NM_001314057 MBNL1 1 0.25 0.22 15 7.01 78.44 27 6.4 Yes 14 0.76 No 26 0.88 Yes -26 0.9 Yes 44 83.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 152175797 + NM_001314057 MBNL1 1 0.14 0.79 34 4.73 79.36 37 8.6 Yes 74 -5.21 No 0 0 No -28 0.61 No 42 46.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 152175918 + NM_001314057 MBNL1 1 0.21 1.13 47 6.16 79.26 25 5.48 No 32 -2.48 No 24 0.75 Yes -24 0.88 Yes 46 83.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 97920540 + NM_001306070 MBNL2 1 0.16 0.11 7 9.12 86.16 23 7.62 Yes 70 1.27 Yes 0 0 No -22 0.85 Yes 48 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 97969482 + NM_001306070 MBNL2 1 0.8 0.63 31 8.34 90.61 19 3.68 No 0 0.68 No 0 0 No -21 0.7 Yes 51 79.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 98009049 + NM_001306070 MBNL2 1 7.69 2.76 60 2.9 72.66 142 11.59 Yes 14 0.26 No 29 0.4 Yes -26 0.59 No 41 71.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 131515461 - NM_001170704 MBNL3 1 30.94 11.99 72 6.72 84.13 22 4.81 No 9 0.72 No 26 0.81 Yes -26 0.8 Yes 44 83.45 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 131520735 - NM_001170704 MBNL3 1 3.2 2.28 58 8.16 82.54 27 7.74 Yes 14 0.89 Yes 26 0.7 Yes -26 0.58 No 43 62.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 131538421 - NM_001170704 MBNL3 1 0.21 0.19 13 5.9 78.09 21 5.2 No 17 2.11 Yes 0 0 No -20 0.73 Yes 41 77.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20124766 - NM_001080480 MBOAT1 1 0.26 0.17 11 -1.01 58.66 40 7.55 Yes 72 1.4 Yes 0 0 No -39 0.87 Yes 31 84.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 20126137 - NM_001080480 MBOAT1 1 0.42 0.28 14 5.45 76.54 28 4.82 No 20 0.65 No 27 0.84 Yes -23 0.71 Yes 47 73.21 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 20126158 - NM_001080480 MBOAT1 1 7.6 4.78 68 6.08 86.46 30 4.86 No -1 0.68 No 27 0.84 Yes -33 0.67 Yes 37 74.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 20140654 - NM_001080480 MBOAT1 1 0.27 0.14 9 4.86 66.64 24 6.9 Yes 11 1.63 Yes 0 0 No -23 0.64 No 47 79.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 20172263 - NM_001080480 MBOAT1 1 0.73 0.11 7 10.06 87.44 74 9.74 Yes 61 2.11 Yes 0 0 No -35 0.34 No 42 44.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 20181372 - NM_001080480 MBOAT1 1 2.03 0.39 21 8.93 83.05 22 5.51 No 9 0.68 No 0 0 No -24 0.76 Yes 42 85.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 54681946 - NM_024298 MBOAT7 1 0.52 0.32 19 7.79 85.96 19 6.24 Yes 6 1.04 Yes 0 0 No -18 0.84 Yes 52 89.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 54687172 - NM_024298 MBOAT7 1 0.25 0.11 7 11.4 83.05 28 5.46 No 69 1.38 Yes 0 0 No -27 0.68 Yes 43 75.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 54691192 - NM_024298 MBOAT7 1 0.17 0.15 8 4.56 72.61 28 4.09 No 72 -2.73 No 21 0.41 Yes -21 0.35 No 49 43.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 74731557 - NM_001025101 MBP 1 0.33 0.46 16 4.88 83.01 29 6.63 Yes 56 -4.4 No 0 0 No -23 0.49 No 47 54.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 74766882 - NM_001025101 MBP 1 0.17 0.25 12 5.96 81.35 31 6.71 Yes 18 1.97 Yes 0 0 No -30 0.97 Yes 40 96.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 74775571 - NM_001025101 MBP 1 0.15 0.19 8 -2.82 78.62 28 6.16 Yes 53 -1.18 No 0 0 No -28 0.5 No 45 69.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 74776367 - NM_001025101 MBP 1 0.92 1.14 41 8.82 86.96 32 7.07 Yes 31 0.84 Yes 0 0 No -31 0.46 No 39 73.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 74777657 - NM_001025101 MBP 1 0.2 0.22 13 5.63 84.23 37 6.48 Yes 5 1.7 Yes 0 0 No -36 0.92 Yes 34 88.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 74778337 - NM_001025101 MBP 1 0.54 0.43 22 2.87 0 38 5.43 No 43 0.08 No 0 0 No -38 0.76 Yes 32 92.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 74784422 - NM_001025101 MBP 1 0.21 0.15 8 6.91 87.08 23 5.29 No 50 0.76 No 0 0 No -22 0.93 Yes 48 94.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 74807507 - NM_001025101 MBP 1 0.23 0.17 9 5.68 79.32 60 10.52 Yes 0 1.3 Yes 27 0.59 Yes -27 0.53 No 52 62.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 74809431 - NM_001025101 MBP 1 2.25 1.53 52 9.93 81.85 21 5 No 58 0.85 Yes 20 0.83 Yes -20 0.92 Yes 50 91.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 49263578 - NM_017643 MBTD1 1 2.73 0.61 33 1.98 68.41 14 4.62 No 48 0.64 No 0 0 No -24 0.86 Yes 46 91.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 49281268 - NM_017643 MBTD1 1 0.43 0.13 8 3.79 71.89 17 5.26 No 26 0.52 No 0 0 No -21 0.56 No 49 73.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 49281308 - NM_017643 MBTD1 1 0.41 0.1 7 5.87 81.71 23 6.96 Yes 10 0.3 No 30 0.71 Yes -35 0.53 No 35 59.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 49286792 - NM_017643 MBTD1 1 9.09 2.31 65 4.58 0 20 3.52 No 4 0.7 No 19 0.85 Yes -19 0.87 Yes 51 78.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 49286885 - NM_017643 MBTD1 1 1.12 0.31 13 8.08 92.03 30 5.92 Yes 17 0.33 No 0 0 No -23 0.5 No 41 61.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 49294775 - NM_017643 MBTD1 1 7.02 1.57 54 3.83 87.45 21 4.61 No 50 1.39 Yes 0 0 No -25 0.6 No 45 74.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 49296944 - NM_017643 MBTD1 1 0.7 0.19 11 9.01 91.42 26 5.07 No 52 0.73 No 0 0 No -21 0.82 Yes 49 69.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 84093080 - NM_003791 MBTPS1 1 0.39 0.32 18 8.27 79.4 35 4.76 No 16 0.5 No 34 0.58 Yes -34 0.52 No 36 80.07 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 84094436 - NM_003791 MBTPS1 1 0.23 0.19 12 1.32 77.52 10 4.45 No 76 -5.44 No 22 0.9 Yes -37 0.23 No 22 11.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 84100215 - NM_003791 MBTPS1 1 0.87 1.01 45 1.1 0 43 7.57 Yes 50 0.9 Yes 0 0 No -42 0.93 Yes 28 96.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 84109262 - NM_003791 MBTPS1 1 2.63 3.03 64 2.94 75.87 26 5.07 No 13 0.42 No 25 0.86 Yes -25 0.9 Yes 45 92.1 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 84115509 - NM_003791 MBTPS1 1 0.25 0.26 14 2.86 0 19 6.05 Yes 6 0.46 No 0 0 No -26 0.62 No 44 60.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 84121677 - NM_003791 MBTPS1 1 0.07 0.13 8 10.15 92.75 19 4.77 No 72 0.84 Yes 0 0 No -23 0.89 Yes 47 81.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 84122751 - NM_003791 MBTPS1 1 0.18 0.33 15 12.01 94.43 26 5.66 Yes 54 1.16 Yes 0 0 No -25 0.78 Yes 45 62.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 84129399 - NM_003791 MBTPS1 1 0.09 0.19 14 1.29 0 10 4.58 No 23 1.68 Yes 0 0 No -35 0.79 Yes 35 91.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 84132883 - NM_003791 MBTPS1 1 0.69 0.82 38 4.46 79.17 36 5.9 Yes 54 0.72 No 0 0 No -28 0.75 Yes 42 86.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 84143189 - NM_003791 MBTPS1 1 0.48 0.33 20 7.54 88.65 25 7.28 Yes 12 1.61 Yes 24 0.9 Yes -24 0.93 Yes 46 90.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 84144431 - NM_003791 MBTPS1 1 0.38 0.29 17 5.9 71.55 25 6.08 Yes 12 0.57 No 24 0.78 Yes -24 0.91 Yes 46 94.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 84144799 - NM_003791 MBTPS1 1 0.16 0.1 7 10.64 81.03 23 7.91 Yes 32 0.56 No 0 0 No -22 0.66 No 38 73.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 21900570 + NM_015884 MBTPS2 1 0.29 0.15 10 7.94 92.23 27 4.51 No 39 1.14 Yes 0 0 No -26 0.94 Yes 44 95.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43529440 - NM_173467 MCAT 1 0.43 0.22 15 -2.85 0 17 4.24 No 61 1.15 Yes 0 0 No -16 0.38 No 48 44.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 43529449 - NM_173467 MCAT 1 1.18 0.61 29 3.58 0 14 4.47 No 52 1.16 Yes 0 0 No -19 0.38 No 57 46.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 43529449 - NM_173467 MCAT 1 0.64 0.29 18 3.58 0 14 4.47 No 52 1.16 Yes 0 0 No -19 0.38 No 57 46.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 43529741 - NM_173467 MCAT 1 0.33 0.18 9 7.08 80.32 27 5.44 No 42 0.79 Yes 0 0 No -26 0.36 No 44 52.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 43534231 - NM_173467 MCAT 1 0.31 0.15 8 3.48 0 35 7.42 Yes 22 1.78 Yes 0 0 No -34 0.91 Yes 36 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43538314 - NM_173467 MCAT 1 0.65 0.21 13 6.77 86.65 32 7.94 Yes 19 1.35 Yes 0 0 No -31 0.93 Yes 39 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 182742033 - NR_120640 MCCC1 1 0.12 0.11 8 3.77 81.2 40 6.81 Yes 19 1.13 Yes 0 0 No -31 0.47 No 38 68.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182788933 - NR_120640 MCCC1 1 0.52 0.49 21 6.91 79.4 34 4.55 No 21 0.21 No 33 0.7 Yes -33 0.69 Yes 37 84.05 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 182791231 - NR_120640 MCCC1 1 0.27 0.19 11 6.14 79.19 20 5.22 No 7 0.85 Yes 0 0 No -22 0.47 No 48 54.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 182797072 - NR_120640 MCCC1 1 0.41 0.33 17 8.98 98.54 25 5.29 No 12 0.81 Yes 0 0 No -24 0.8 Yes 46 82.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 182797432 - NR_120640 MCCC1 1 0.36 0.29 18 5.58 84.75 24 4.99 No 60 -3.74 No 0 0 No -21 0.47 No 47 60.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 182808820 - NR_120640 MCCC1 1 1.33 1.01 47 7.28 83.96 41 7.3 Yes 28 0.69 No 28 0.52 Yes -34 0.31 No 36 56.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 70891428 + NM_022132 MCCC2 1 0.07 0.19 8 4.84 81.91 19 7.53 Yes 6 1.4 Yes 0 0 No -18 0.23 No 52 42.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 70898337 + NM_022132 MCCC2 1 0.42 1.21 43 1.31 0 39 6.15 Yes 10 0.4 No 0 0 No -39 0.66 Yes 31 48.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 70926612 + NM_022132 MCCC2 1 0.15 0.29 19 12.84 99.29 51 6.96 Yes 38 0.39 No 0 0 No -30 0.74 Yes 40 59.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 70930770 + NM_022132 MCCC2 1 0.05 0.14 9 -19.37 0 20 4.99 No 15 0.95 Yes 0 0 No -27 0.71 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 70930773 + NM_022132 MCCC2 1 0.04 0.14 9 -2.66 0 23 5.27 No 18 0.96 Yes 0 0 No -30 0.59 No 40 81.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 70931930 + NM_022132 MCCC2 1 0.64 2.47 65 8.64 77.16 29 4.29 No 9 0.32 No 28 0.64 Yes -34 0.29 No 46 50.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 70933939 + NM_022132 MCCC2 1 0.03 0.11 7 6.51 86.32 61 8.36 Yes 48 1.34 Yes 0 0 No -31 0.61 No 39 72.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 70935678 + NM_022132 MCCC2 1 0.04 0.15 9 7.91 79.41 37 6.85 Yes 76 0.84 Yes 0 0 No -28 0.64 No 42 72.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 70938490 + NM_022132 MCCC2 1 0.08 0.19 12 6.47 83.58 30 5.95 Yes 17 0.53 No 0 0 No -29 0.79 Yes 41 89.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 70939597 + NM_022132 MCCC2 1 0.25 0.63 36 5.13 69.18 39 6.1 Yes 15 0.22 No 27 0.66 Yes -38 0.68 Yes 32 64.76 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 70945519 + NM_022132 MCCC2 1 2.19 4.92 71 -12.41 0 21 4.47 No 66 -5.32 No 0 0 No -20 0.17 No 19 52.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 70947754 + NM_022132 MCCC2 1 0.05 0.17 12 6.72 95.81 22 4.53 No 59 1.03 Yes 0 0 No -21 0.44 No 49 55.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 71337989 - NM_032601 MCEE 1 3.12 0.85 40 9.73 80.35 29 6.7 Yes 16 0.45 No 28 0.7 Yes -28 0.8 Yes 42 80.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 71344025 - NM_032601 MCEE 1 1.58 0.43 27 8.35 84.27 26 5.29 No 41 -3.1 No 25 0.7 Yes -25 0.51 No 45 52.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 71356950 - NM_032601 MCEE 1 1.14 0.32 16 -1.39 57.92 27 5.74 Yes 14 0.71 No 24 0.62 Yes -26 0.69 Yes 43 54.33 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 47133122 - NM_001171506 MCFD2 1 1.51 1.65 49 7.25 94.78 74 8.56 Yes 61 1.15 Yes 19 0.69 Yes -27 0.49 No 51 62.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 47133958 - NM_001171506 MCFD2 1 0.31 0.35 21 9.24 82.82 31 3.66 No 26 -0.91 No 0 0 No -24 0.48 No 48 40.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 150550819 - NM_001197320 MCL1 1 0.11 0.57 29 -0.09 66.03 43 7.6 Yes 30 1.52 Yes 0 0 No -42 0.84 Yes 28 86.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13212923 + NM_018518 MCM10 1 0.4 0.25 17 2.96 84.68 34 7.07 Yes 21 0.91 Yes 0 0 No -33 0.98 Yes 37 96.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13214624 + NM_018518 MCM10 1 40.45 25.4 72 1.31 73.21 23 7.52 Yes 10 1.39 Yes 22 0.89 Yes -22 0.77 Yes 48 88.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 13234234 + NM_018518 MCM10 1 0.25 0.19 11 3.13 70.91 34 6.36 Yes 72 -4.99 No 23 0.89 Yes -28 0.56 No 42 53.28 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 13239626 + NM_018518 MCM10 1 0.35 0.32 15 2.63 0 21 6.04 Yes 8 1.25 Yes 0 0 No -31 0.7 Yes 39 85.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13239940 + NM_018518 MCM10 1 0.18 0.13 8 -7.86 81.42 25 7.28 Yes 12 1.3 Yes 0 0 No -24 0.87 Yes 46 87.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127329621 + NR_073375 MCM2 1 0.03 0.13 8 8.74 87.99 23 6.5 Yes 3 0.12 No 22 0.85 Yes -22 0.91 Yes 48 93.31 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 127340205 + NR_073375 MCM2 1 0.05 0.15 10 4.05 79.23 26 5.48 No 13 0.88 Yes 0 0 No -25 0.88 Yes 45 92.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52130184 - NM_001270472 MCM3 1 2.91 8.82 71 7.38 85.96 28 5.51 No 62 1.23 Yes 27 0.92 Yes -25 0.67 Yes 45 75.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 52131492 - NM_001270472 MCM3 1 0.25 1.03 46 0.5 70.5 69 9.12 Yes 56 0.63 No 0 0 No -22 0.57 No 29 56.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 52131507 - NM_001270472 MCM3 1 0.13 0.56 29 0.38 0 54 8.27 Yes 41 0.65 No 20 0.62 Yes -26 0.5 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 52131510 - NM_001270472 MCM3 1 0.07 0.33 20 4.5 0 51 8.09 Yes 38 0.66 No 20 0.62 Yes -23 0.53 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 52131573 - NM_001270472 MCM3 1 0.11 0.43 23 10.15 79.81 32 5.81 Yes 38 0.9 Yes 0 0 No -27 0.74 Yes 43 89.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52136274 - NM_001270472 MCM3 1 0.34 1.18 38 6.42 80.12 19 7.07 Yes 6 1.13 Yes 0 0 No -27 0.67 Yes 43 71.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52136434 - NM_001270472 MCM3 1 0.08 0.26 14 -0.25 0 45 8.33 Yes 32 1.62 Yes 0 0 No -44 0.81 Yes 26 92.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52137301 - NM_001270472 MCM3 1 0.24 0.96 30 -4.1 0 16 4.58 No 25 1.42 Yes 0 0 No -37 0.7 Yes 20 26.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 52138625 - NM_001270472 MCM3 1 0.05 0.17 11 3.58 71.69 44 6.48 Yes 14 0.82 Yes 0 0 No -26 0.76 Yes 36 65.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 52138673 - NM_001270472 MCM3 1 0.04 0.18 11 0.22 79.38 22 4.9 No 67 1.01 Yes 0 0 No -22 0.69 Yes 49 40.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 52141994 - NM_001270472 MCM3 1 0.04 0.14 7 -10.63 62.68 25 4.78 No 9 0.38 No 0 0 No -24 0.86 Yes 46 80.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 52144347 - NM_001270472 MCM3 1 0.47 1.97 58 5.95 83.11 30 5.66 Yes 68 0.41 No 0 0 No -29 0.86 Yes 41 70.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 52146307 - NM_001270472 MCM3 1 0.12 0.44 25 9.16 83.16 25 6.4 Yes 12 1.87 Yes 0 0 No -24 0.9 Yes 46 93.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52146473 - NM_001270472 MCM3 1 0.69 2.86 61 8.92 87.82 24 6.91 Yes 11 0.42 No 0 0 No -23 0.94 Yes 47 97.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47655361 - NM_003906 MCM3AP 1 0.35 0.69 30 2.97 66.75 20 6.44 Yes 55 0.63 No 22 0.79 Yes -19 0.64 No 47 60.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 47656809 - NM_003906 MCM3AP 1 0.41 0.51 20 9.6 87.63 28 6.82 Yes 15 1.16 Yes 0 0 No -27 0.74 Yes 43 61.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 47670530 - NM_003906 MCM3AP 1 0.8 0.89 41 6.36 93.04 13 4.99 No 52 0.83 Yes 0 0 No -19 0.56 No 51 70.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 47672595 - NM_003906 MCM3AP 1 0.47 0.44 25 10.83 88.27 32 5.83 Yes 23 0.33 No 0 0 No -31 0.71 Yes 39 86.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47674507 - NM_003906 MCM3AP 1 0.7 0.68 35 10.15 83.02 34 6.88 Yes 27 1.69 Yes 0 0 No -39 0.37 No 37 52.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 47675508 - NM_003906 MCM3AP 1 0.13 0.15 8 10.15 83.02 34 6.46 Yes 27 1.73 Yes 0 0 No -39 0.72 Yes 31 81.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47685925 - NM_003906 MCM3AP 1 2.55 2.76 66 5.48 76.43 48 5.04 No 35 0.46 No 0 0 No -16 0.35 No 34 41.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 47686003 - NM_003906 MCM3AP 1 0.39 0.38 20 4.23 80.04 24 5.1 No 53 0.78 Yes 0 0 No -20 0.49 No 50 52.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 47687498 - NM_003906 MCM3AP 1 0.32 0.42 23 9.77 89.4 43 6.66 Yes 74 0.85 Yes 0 0 No -33 0.83 Yes 37 89.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47687639 - NM_003906 MCM3AP 1 0.38 0.49 24 5.81 87.82 25 6.35 Yes 12 0.58 No 0 0 No -24 0.94 Yes 46 95.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47697757 - NM_003906 MCM3AP 1 0.44 0.78 33 5.98 85.97 49 7.09 Yes 36 1.79 Yes 0 0 No -22 0.68 Yes 48 73.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48874637 + NM_005914 MCM4 1 0.19 0.5 26 3.73 65.76 14 5.01 No 28 1.2 Yes 29 0.8 Yes -27 0.61 No 43 73.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 48874868 + NM_005914 MCM4 1 0.04 0.13 7 0.1 0 43 8.95 Yes 30 1.54 Yes 0 0 No -31 0.84 Yes 39 87.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48875305 + NM_005914 MCM4 1 0.1 0.51 24 2.6 75.94 40 6.56 Yes 42 0.98 Yes 24 0.96 Yes -57 0.49 No 13 30.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 48875325 + NM_005914 MCM4 1 0.09 0.42 25 -8.62 65.32 27 5.39 No 14 1.29 Yes 0 0 No -26 0.87 Yes 44 92.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48881838 + NM_005914 MCM4 1 0.47 2.26 57 3.39 83.32 25 8.08 Yes 12 0.24 No 0 0 No -24 0.95 Yes 46 82.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 48881863 + NM_005914 MCM4 1 0.08 0.39 25 6.41 87.65 28 5.29 No 37 0.24 No 0 0 No -27 0.67 Yes 21 73.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 48883085 + NM_005914 MCM4 1 0.33 1.35 46 2.75 80.49 25 4.88 No 12 0.99 Yes 0 0 No -24 0.85 Yes 46 70.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48883222 + NM_005914 MCM4 1 0.03 0.1 7 7.39 81.55 14 5.66 Yes 67 0.29 No 0 0 No -25 0.86 Yes 45 81.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 48885450 + NM_005914 MCM4 1 0.05 0.26 14 6.61 80.72 30 5.24 No 12 0.59 No 0 0 No -29 0.66 Yes 34 62.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 35797658 + NM_006739 MCM5 1 0.21 0.65 29 6.18 81.44 32 6.08 Yes 19 0.68 No 31 0.61 Yes -30 0.51 No 40 47.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 35804402 + NM_006739 MCM5 1 0.08 0.39 22 -7.26 69.16 27 6.56 Yes 14 1.8 Yes 0 0 No -26 0.87 Yes 44 92.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 35815880 + NM_006739 MCM5 1 0.11 0.5 25 -4.11 0 33 5.83 Yes 20 1.43 Yes 0 0 No -32 0.85 Yes 38 95.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 35817314 + NM_006739 MCM5 1 0.04 0.15 10 0.92 0 26 5.66 Yes 13 0.91 Yes 0 0 No -25 0.64 No 45 50.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 35817809 + NM_006739 MCM5 1 0.02 0.1 7 10.83 90.89 24 5.83 Yes 59 1.07 Yes 0 0 No -31 0.67 Yes 47 79.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 35819056 + NM_006739 MCM5 1 0.22 0.86 41 8.95 84.62 31 6.7 Yes 45 1.22 Yes 0 0 No -28 0.58 No 42 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 35819138 + NM_006739 MCM5 1 0.03 0.14 9 4.68 72.85 23 5.39 No 33 1.75 Yes 0 0 No -22 0.87 Yes 48 90.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136602252 - NM_005915 MCM6 1 0.43 0.68 35 -1.3 76.78 29 6.3 Yes 11 0.17 No 0 0 No -23 0.5 No 42 59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 136614266 - NM_005915 MCM6 1 0.16 0.47 24 9.31 93.23 22 5.26 No 17 1.24 Yes 0 0 No -21 0.55 No 41 62.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 136614474 - NM_005915 MCM6 1 0.04 0.13 8 3.45 69.23 23 7.02 Yes 10 1.55 Yes 22 0.75 Yes -30 0.73 Yes 40 76.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 136627930 - NM_005915 MCM6 1 0.05 0.17 12 -4.34 79.23 20 5.55 No 7 1.75 Yes 0 0 No -24 0.68 Yes 46 80.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99695052 - NM_005916 MCM7 1 0.03 0.11 7 0.58 68.8 25 6.16 Yes 12 0.1 No 0 0 No -24 0.92 Yes 46 91.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99695367 - NM_005916 MCM7 1 0.04 0.21 13 -3.21 79.01 26 4.71 No 2 1.13 Yes 0 0 No -26 0.33 No 49 31.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 99695905 - NM_005916 MCM7 1 0.08 0.42 27 -6.25 0 12 4 No 18 0.55 No 0 0 No -30 0.93 Yes 40 95.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99695912 - NM_005916 MCM7 1 0.02 0.11 7 -11.23 71.8 24 6 Yes 11 0.57 No 0 0 No -23 0.95 Yes 47 96.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99696294 - NM_005916 MCM7 1 0.02 0.18 10 -0.25 0 19 6.79 Yes 66 0.86 Yes 0 0 No -27 0.58 No 43 71.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 99696800 - NM_005916 MCM7 1 0.02 0.11 7 -4.26 0 14 4.36 No 33 1.5 Yes 0 0 No -45 0.51 No 25 44.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 99696803 - NM_005916 MCM7 1 0.01 0.1 7 -2.59 0 11 4 No 30 1.51 Yes 0 0 No -42 0.47 No 28 54.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 99696810 - NM_005916 MCM7 1 0.04 0.25 15 1.47 79.7 16 4.56 No 23 1.52 Yes 0 0 No -19 0.63 No 35 50.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 99697715 - NM_005916 MCM7 1 0.05 0.13 9 -17.59 0 40 6.1 Yes 14 0.8 Yes 0 0 No -26 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 5933749 + NM_001281520 MCM8 1 0.17 0.17 12 8.83 88.65 12 4.59 No 71 -3.66 No 0 0 No -23 0.52 No 48 74.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 5938679 + NM_001281520 MCM8 1 0.88 0.58 26 1.45 0 32 7.83 Yes 19 0.72 No 0 0 No -32 0.76 Yes 38 83.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5948523 + NM_001281520 MCM8 1 2.85 1.81 53 5.91 76.23 31 5.83 Yes 53 0.89 Yes 30 0.72 Yes -30 0.7 Yes 40 65.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 5953221 + NM_001281520 MCM8 1 5.29 4.49 70 1.52 83 42 6.44 Yes 23 0.12 No 24 0.64 Yes -24 0.44 No 46 40.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 5953245 + NM_001281520 MCM8 1 1.59 1.38 47 3.89 84.17 27 5.2 No 47 0.12 No 0 0 No -26 0.53 No 12 48.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5957934 + NM_001281520 MCM8 1 0.29 0.17 12 7.46 90.81 36 6.85 Yes 23 0.35 No 0 0 No -25 0.73 Yes 45 76.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5953221 + NM_001281520 MCM8 1 1.14 0.99 35 1.52 83 42 6.44 Yes 23 0.12 No 24 0.64 Yes -24 0.44 No 46 40.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 5953245 + NM_001281520 MCM8 1 0.63 0.53 22 3.89 84.17 27 5.2 No 47 0.12 No 0 0 No -26 0.53 No 12 48.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5953711 + NM_001281520 MCM8 1 0.11 0.13 9 -3.85 0 13 4.36 No 48 1.59 Yes 0 0 No -43 0.84 Yes 27 94.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 5953714 + NM_001281520 MCM8 1 0.21 0.18 12 0.46 79.55 16 4.69 No 51 1.59 Yes 0 0 No -46 0.84 Yes 24 94.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 5957934 + NM_001281520 MCM8 1 0.28 0.21 14 7.46 90.81 36 6.85 Yes 23 0.35 No 0 0 No -25 0.73 Yes 45 76.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5957934 + NM_001281520 MCM8 1 4.79 3.18 67 7.46 90.81 36 6.85 Yes 23 0.35 No 0 0 No -25 0.73 Yes 45 76.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5958525 + NM_001281520 MCM8 1 0.24 0.18 10 2.94 0 32 7.66 Yes 10 0.6 No 0 0 No -23 0.61 No 39 57.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5959566 + NM_001281520 MCM8 1 0.58 0.51 28 9.3 98.16 22 4.5 No 13 1.29 Yes 0 0 No -25 0.57 No 45 71.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 5965476 + NM_001281520 MCM8 1 2.46 1.85 60 7.04 81.98 22 5.92 Yes 68 0.59 No 0 0 No -21 0.77 Yes 38 68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 119216490 - NM_017696 MCM9 1 9.97 1.53 53 4.07 85.86 22 4.79 No 40 1.44 Yes 0 0 No -21 0.68 Yes 49 64.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 119216504 - NM_017696 MCM9 1 4.07 0.43 24 4.41 66.34 27 5.72 Yes 26 1.46 Yes 0 0 No -26 0.82 Yes 44 84.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 119249844 - NM_017696 MCM9 1 5.31 0.68 33 9.01 88.27 22 4.73 No 18 0.82 Yes 0 0 No -30 0.72 Yes 40 79.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121591609 - NM_001256379 MCMBP 1 0.94 1.92 56 -1.33 0 59 8.66 Yes 46 0.84 Yes 0 0 No -25 0.84 Yes 45 78.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121591609 - NM_001256379 MCMBP 1 0.06 0.14 9 -1.33 0 59 8.66 Yes 46 0.84 Yes 0 0 No -25 0.84 Yes 45 78.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121595213 - NM_001256379 MCMBP 1 0.37 0.81 38 3.78 0 21 3.85 No 72 1 Yes 0 0 No -26 0.75 Yes 44 78.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121595213 - NM_001256379 MCMBP 1 0.06 0.22 8 3.78 0 21 3.85 No 72 1 Yes 0 0 No -26 0.75 Yes 44 78.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121608966 - NM_001256379 MCMBP 1 0.41 0.64 29 5.76 94.15 50 6.66 Yes 28 1.54 Yes 0 0 No -40 0.52 No 30 62.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 121609134 - NM_001256379 MCMBP 1 0.17 0.25 16 8.19 98.31 23 5.69 Yes 10 0.47 No 0 0 No -22 0.95 Yes 48 96.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 121618619 - NM_001256379 MCMBP 1 0.11 0.18 12 4.8 79.64 33 6.08 Yes 51 1.31 Yes 0 0 No -32 0.87 Yes 38 93.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7595255 + NM_020533 MCOLN1 1 0.76 0.11 8 6.12 82.46 43 5.67 Yes 6 1.36 Yes 0 0 No -27 0.52 No 43 47.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7595320 + NM_020533 MCOLN1 1 5.58 0.79 37 3.64 83.08 14 5.65 Yes 71 1.38 Yes 25 0.68 Yes -25 0.7 Yes 45 83.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 85394113 - NM_001330647 MCOLN2 1 0.22 0.29 16 7.53 86.76 18 5.73 Yes 5 0.61 No 0 0 No -17 0.39 No 43 63.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 85395324 - NM_001330647 MCOLN2 1 1.34 1.47 54 4.68 72.71 32 5.68 Yes 50 0.54 No 0 0 No -31 0.63 No 39 46.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 85395543 - NM_001330647 MCOLN2 1 0.14 0.14 8 9.66 84.34 35 6.32 Yes 22 0.93 Yes 19 0.61 Yes -34 0.85 Yes 36 86.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 85397165 - NM_001330647 MCOLN2 1 0.18 0.21 12 2.45 71 63 8.23 Yes 50 1.29 Yes 0 0 No -32 0.47 No 38 69.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 85397168 - NM_001330647 MCOLN2 1 0.19 0.22 13 3.32 73.87 60 8.05 Yes 47 1.3 Yes 0 0 No -29 0.55 No 41 69.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 85403277 - NM_001330647 MCOLN2 1 3.16 4.11 65 14.23 99.45 30 6 Yes 35 0.7 No 29 0.53 Yes -32 0.58 No 41 84.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 85405114 - NM_001330647 MCOLN2 1 0.31 0.58 25 7.66 87.77 31 6.93 Yes 18 0.95 Yes 0 0 No -30 0.89 Yes 40 84.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85405384 - NM_001330647 MCOLN2 1 0.7 1.31 46 -6.32 76.05 32 5.56 No 71 0.02 No 0 0 No -32 0.59 No 38 65.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 85408648 - NM_001330647 MCOLN2 1 0.07 0.1 7 3.53 81.33 25 5 No 63 0.27 No 0 0 No -27 0.5 No 43 75.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 85412763 - NM_001330647 MCOLN2 1 1.04 1.33 46 3.81 82.41 32 5.98 Yes 67 0.33 No 31 0.9 Yes -31 0.83 Yes 39 94.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 85417988 - NM_001330647 MCOLN2 1 0.95 2.15 62 7.48 85.05 30 4.49 No 55 0.44 No 0 0 No -29 0.93 Yes 41 96.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 85418533 - NM_001330647 MCOLN2 1 0.06 0.13 8 6.44 76.25 32 7.07 Yes 19 1.4 Yes 0 0 No -31 0.97 Yes 39 97.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85419227 - NM_001330647 MCOLN2 1 0.21 0.53 25 2.78 0 29 7.21 Yes 16 2.04 Yes 0 0 No -28 0.79 Yes 42 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85444651 - NM_001330647 MCOLN2 1 0.39 0.15 8 4.32 77.64 36 5.41 No 66 -1.24 No 0 0 No -37 0.81 Yes 35 74.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 85458993 - NM_001330647 MCOLN2 1 14.93 6.94 71 5.45 84.58 55 7.88 Yes 42 0.38 No 0 0 No -29 0.72 Yes 41 62.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 85459267 - NM_001330647 MCOLN2 1 0.28 0.14 10 7.02 78.77 26 4.06 No -3 0.38 No 0 0 No -26 0.77 Yes 44 79.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 85459657 - NM_001330647 MCOLN2 1 0.31 0.13 9 5.24 83.07 43 7.27 Yes 8 1.12 Yes 0 0 No -20 0.81 Yes 50 91.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 6266805 + NM_024596 MCPH1 1 0.42 0.22 12 0.1 0 9 3.87 No 15 0.61 No 0 0 No -27 0.71 Yes 43 89.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 6272606 + NM_024596 MCPH1 1 0.31 0.28 15 4.42 75.67 19 6.28 Yes -1 0.71 No 0 0 No -26 0.84 Yes 44 79.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 6316817 + NM_024596 MCPH1 1 0.87 0.28 15 3.71 82.92 30 8.28 Yes 17 0.78 Yes 0 0 No -29 0.57 No 40 84.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 6322853 + NM_024596 MCPH1 1 0.61 0.18 11 6.11 82.25 17 4.8 No 66 -4.36 No 0 0 No -19 0.44 No 51 45.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 6328563 + NM_024596 MCPH1 1 0.4 0.14 9 7.39 93.81 19 4.9 No 45 0.92 Yes 0 0 No -22 0.74 Yes 48 89.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79781382 - NM_001288798 MCRIP1 1 0.1 0.1 7 1.63 0 18 4.1 No 21 1.01 Yes 0 0 No -33 0.73 Yes 40 64.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 79782267 - NM_001288798 MCRIP1 1 0.72 0.68 26 6.42 82.99 18 4.9 No 22 0.98 Yes 0 0 No -21 0.55 No 36 49.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 697193 + NR_138610 MCRIP2 1 11.38 0.6 9 6.95 88.05 16 4.6 No 3 0.92 Yes 0 0 No -19 0.61 No 51 79.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 698103 + NR_138610 MCRIP2 1 0.1 0.14 9 -3.83 72.35 10 4.69 No 53 -2.7 No 25 0.81 Yes -19 0.35 No 61 29.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 698140 + NR_138610 MCRIP2 1 0.35 0.44 22 5.6 64.67 26 5.48 No 34 0.5 No 0 0 No -28 0.56 No 45 73.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 49952534 - NM_006337 MCRS1 1 0.53 0.79 38 2.58 73.59 31 6.78 Yes 47 -2.61 No 24 0.93 Yes -31 0.72 Yes 39 68.93 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 49954149 - NM_006337 MCRS1 1 1.29 1.54 51 4.62 0 30 7.14 Yes 17 2.09 Yes 24 0.94 Yes -29 0.96 Yes 41 98.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 49959463 - NM_006337 MCRS1 1 0.21 0.17 12 1.44 83.32 20 4.8 No -3 0.21 No 19 0.82 Yes -19 0.5 No 61 29.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 49959991 - NM_006337 MCRS1 1 0.21 0.29 17 1.14 0 11 4.12 No 30 -1.1 No 0 0 No -27 0.63 No 43 88.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 49960408 - NM_006337 MCRS1 1 0.69 0.88 40 7.66 72.63 45 7.87 Yes 32 1.54 Yes 0 0 No -44 0.67 Yes 26 66.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 49961533 - NM_006337 MCRS1 1 1.77 2.22 61 2.37 0 9 3.87 No 60 0.27 No 25 0.39 Yes -37 0.47 No 33 44.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 49961539 - NM_006337 MCRS1 1 0.14 0.19 9 -4.19 75.06 32 5.62 Yes 54 0.28 No 25 0.39 Yes -31 0.59 No 39 49.98 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 94155338 - NM_001002796 MCTP1 1 2.18 0.72 32 7.55 92.48 19 5.24 No 3 0.85 Yes 0 0 No -22 0.46 No 52 43.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 94165827 - NM_001002796 MCTP1 1 0.94 0.43 23 9.88 82.61 57 6.07 Yes 74 0.95 Yes 0 0 No -21 0.72 Yes 49 74.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 94183782 - NM_001002796 MCTP1 1 0.59 0.19 11 4.91 80.25 20 6.82 Yes 7 0.71 No 0 0 No -26 0.8 Yes 44 80.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94206217 - NM_001002796 MCTP1 1 0.43 0.15 8 4.39 78.05 50 5.05 No 55 -6.1 No 24 0.84 Yes -26 0.63 No 44 57.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 94241638 - NM_001002796 MCTP1 1 13.79 9.92 72 12.75 94.74 31 8.11 Yes 18 1.16 Yes 0 0 No -30 0.56 No 40 83.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 94270630 - NM_001002796 MCTP1 1 0.5 0.25 14 9.03 79.76 25 5.57 Yes 24 1.01 Yes 0 0 No -24 0.85 Yes 46 81.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 94270918 - NM_001002796 MCTP1 1 0.67 0.25 15 6.33 87.92 25 5.1 No 12 0.74 No 0 0 No -24 0.93 Yes 46 95.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94277645 - NM_001002796 MCTP1 1 0.66 0.78 27 6.29 81.6 28 5.29 No 69 -4.36 No 0 0 No -21 0.34 No 49 50.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 94312514 - NM_001002796 MCTP1 1 0.53 0.25 13 9.84 83.25 19 5.41 No 6 0.87 Yes 26 0.59 Yes -26 0.57 No 44 45.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 94324976 - NM_001002796 MCTP1 1 3 1.97 59 12.01 93.21 30 5.83 Yes 28 0.07 No 0 0 No -23 0.53 No 47 50.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 94373892 - NM_001002796 MCTP1 1 1.78 1.29 44 7.44 77.34 21 5.96 Yes 8 0.92 Yes 27 0.5 Yes -20 0.77 Yes 50 78.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 94404534 - NM_001002796 MCTP1 1 1.09 0.71 32 8.28 85.97 25 6.11 Yes 1 0.29 No 29 0.44 Yes -25 0.45 No 41 47.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 94415669 - NM_001002796 MCTP1 1 0.22 0.14 7 9.5 85.28 18 7.02 Yes 55 0.89 Yes 0 0 No -22 0.84 Yes 48 68.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 94848593 + NM_001159643 MCTP2 1 3.13 0.83 34 7.27 78.23 19 4.42 No 6 0.6 No 0 0 No -22 0.71 Yes 48 74.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 94857955 + NM_001159643 MCTP2 1 3.19 0.88 41 11.6 86.47 34 5.55 No 14 0.63 No 21 0.48 Yes -30 0.33 No 44 37.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 94858021 + NM_001159643 MCTP2 1 0.5 0.13 9 2.93 69.37 46 7.81 Yes 57 -5.45 No 0 0 No -23 0.82 Yes 47 86.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 94911687 + NM_001159643 MCTP2 1 0.52 0.21 12 5.79 78.79 21 7.15 Yes 4 -0.72 No 0 0 No -23 0.54 No 47 69.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 94919310 + NM_001159643 MCTP2 1 0.53 0.19 11 9.69 90 45 4.5 No 21 1.07 Yes 0 0 No -26 0.88 Yes 44 85.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 94920974 + NM_001159643 MCTP2 1 1.02 0.32 17 2.71 70 27 5.24 No 35 -3.04 No 0 0 No -33 0.63 No 37 79.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 95019281 + NM_001159643 MCTP2 1 0.66 0.11 7 4.18 79.86 26 4.19 No -1 0.25 No 0 0 No -31 0.5 No 39 50.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 74645506 + NM_138357 MCU 1 2.36 1.46 50 1.08 0 25 5.73 Yes 12 1.86 Yes 0 0 No -24 0.94 Yes 46 95.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 110524266 + NM_017918 MCUB 1 0.3 0.19 14 9.51 73.63 41 6.69 Yes 28 0.8 Yes 0 0 No -40 0.74 Yes 30 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 110579167 + NM_017918 MCUB 1 0.82 0.56 9 6.51 83.58 42 6.86 Yes 29 1.01 Yes 0 0 No -28 0.68 Yes 42 79.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 110602590 + NM_017918 MCUB 1 0.2 0.4 23 8.37 82.09 40 6.67 Yes 27 0.8 Yes 0 0 No -39 0.66 No 31 56.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 110606422 + NM_017918 MCUB 1 0.19 0.39 20 0.12 81.14 19 4.82 No 47 0.41 No 0 0 No -59 0.59 No 11 67.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 13787588 - NM_001031713 MCUR1 1 0.06 0.1 7 2.47 79.77 31 6.52 Yes 12 0.91 Yes 24 0.89 Yes -30 0.44 No 40 67.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 13788937 - NM_001031713 MCUR1 1 1.52 2.29 65 8.83 84.86 41 6.85 Yes 61 0.48 No 24 0.73 Yes -24 0.48 No 34 53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 13788937 - NM_001031713 MCUR1 1 0.34 0.5 26 8.83 84.86 41 6.85 Yes 61 0.48 No 24 0.73 Yes -24 0.48 No 34 53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 13794271 - NM_001031713 MCUR1 1 0.68 1.35 47 7.18 78.08 37 4.91 No 59 -4.42 No 0 0 No -24 0.89 Yes 46 93.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 13800613 - NM_001031713 MCUR1 1 0.1 0.17 11 -6 0 26 7.33 Yes 16 1.47 Yes 0 0 No -28 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 13800614 - NM_001031713 MCUR1 1 0.07 0.17 10 -8.74 0 25 7.29 Yes 15 1.47 Yes 0 0 No -27 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 13804548 - NM_001031713 MCUR1 1 0.2 0.19 13 3.36 0 43 9.89 Yes 30 1.67 Yes 42 0.65 Yes -42 0.86 Yes 28 92.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 13807248 - NM_001031713 MCUR1 1 0.44 0.21 15 7.89 80.18 25 5.57 Yes 73 1.09 Yes 0 0 No -24 0.8 Yes 46 87.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 13810833 - NM_001031713 MCUR1 1 3.25 1.49 57 6.27 82.7 42 6.89 Yes 29 0.77 Yes 0 0 No -41 0.64 No 29 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 114562984 + NM_001166345 MDFIC 1 13.92 1.53 50 -2.16 75.44 44 8.48 Yes 31 0.84 Yes 0 0 No -43 0.8 Yes 27 61.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 114563513 + NM_001166345 MDFIC 1 5.61 5.28 70 8.18 84.52 18 4.8 No 5 1.06 Yes 19 0.34 Yes -17 0.81 Yes 53 76.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 114582600 + NM_001166345 MDFIC 1 0.06 0.21 10 6.94 84.35 32 5.87 Yes 19 0.47 No 0 0 No -31 0.84 Yes 39 72.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 114583943 + NM_001166345 MDFIC 1 0.05 0.18 11 10.14 85.81 32 6.54 Yes 63 1.38 Yes 0 0 No -31 0.7 Yes 39 82.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 114586180 + NM_001166345 MDFIC 1 0.05 0.15 10 -9.36 0 15 3.9 No 36 0.62 No 0 0 No -14 0.31 No 16 50.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 114586203 + NM_001166345 MDFIC 1 0.63 1.83 55 4.82 72 14 4.83 No 59 0.62 No 0 0 No -21 0.61 No 49 60.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 114605463 + NM_001166345 MDFIC 1 0.16 0.46 24 9.83 87.19 37 7.01 Yes 24 1.03 Yes 0 0 No -36 0.32 No 39 67.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 114617616 + NM_001166345 MDFIC 1 0.06 0.14 8 7.38 89.9 29 4.61 No 66 0.11 No 0 0 No -23 0.51 No 48 49.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 114617643 + NM_001166345 MDFIC 1 0.28 0.79 39 7.63 80.25 18 5.28 No 5 0.42 No 0 0 No -22 0.92 Yes 48 90.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 114654032 + NM_001166345 MDFIC 1 0.04 0.22 12 9.47 92.4 31 6.69 Yes 18 1.29 Yes 0 0 No -30 0.82 Yes 40 92.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 114654516 + NM_001166345 MDFIC 1 0.03 0.15 10 7.88 90.18 38 6.28 Yes 54 0.3 No 34 0.13 Yes -35 0.51 No 35 62.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 114621430 + NM_001166345 MDFIC 1 0.63 3.11 64 5.76 80.83 71 7.7 Yes 6 0.79 Yes 0 0 No -30 0.66 Yes 40 67.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 114647937 + NM_001166345 MDFIC 1 0.06 0.29 15 7.6 87 23 5.82 Yes 15 1.26 Yes 0 0 No -27 0.69 Yes 43 88.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 114654464 + NM_001166345 MDFIC 1 0.22 1.14 43 6.29 85.91 15 5.39 No 45 0.51 No 0 0 No -27 0.74 Yes 43 78.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 114654516 + NM_001166345 MDFIC 1 2.4 11.81 72 7.88 90.18 38 6.28 Yes 54 0.3 No 34 0.13 Yes -35 0.51 No 35 62.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 114655716 + NM_001166345 MDFIC 1 0.03 0.14 8 2.11 0 37 7.06 Yes 24 1.28 Yes 32 0.9 Yes -36 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 63824504 + NM_001199111 MDH1 1 0.01 0.1 7 0.09 66.92 35 5.72 Yes 73 -5.05 No 33 0.39 Yes -20 0.51 No 50 62.45 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 63827462 + NM_001199111 MDH1 1 0.07 0.51 25 5.78 76.14 35 6.66 Yes 46 0.62 No 0 0 No -34 0.66 Yes 36 80.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 63831904 + NM_001199111 MDH1 1 0.02 0.13 9 1.22 77.25 45 6.52 Yes 35 0.61 No 0 0 No -30 0.59 No 30 45.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 75677893 + NM_005918 MDH2 1 2.16 13.25 72 10.66 92.8 17 4.45 No 4 1 Yes 27 0.89 Yes -27 0.63 No 43 49.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 75677929 + NM_005918 MDH2 1 0.03 0.15 11 6.87 87.65 22 4.43 No 0 1.29 Yes 0 0 No -21 0.68 Yes 49 86.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75689715 + NM_005918 MDH2 1 0.1 1.03 42 5.28 78.94 22 5.83 Yes 9 0.78 Yes 0 0 No -21 0.86 Yes 49 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75689718 + NM_005918 MDH2 1 0.04 0.36 21 2.59 74.69 25 6.08 Yes 12 0.75 No 0 0 No -24 0.89 Yes 46 88.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 75693683 + NM_005918 MDH2 1 0.01 0.18 10 3.76 85.69 18 4.39 No 40 -1.9 No 0 0 No -52 0.48 No 46 34.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 75695165 + NM_005918 MDH2 1 0.02 0.19 11 4 72.15 29 3.76 No 1 0.79 Yes 0 0 No -24 0.66 No 46 73.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 75695597 + NM_005918 MDH2 1 0.02 0.26 16 -10.23 0 52 7.09 Yes 39 1.29 Yes 0 0 No -22 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 75695602 + NM_005918 MDH2 1 0.02 0.26 16 -2.74 0 9 3.87 No 44 1.28 Yes 0 0 No -27 0.7 Yes 43 61.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 68697694 - NM_017440 MDM1 1 0.57 0.26 12 8.41 88.26 21 5.13 No -4 0.24 No 0 0 No -27 0.59 No 43 51.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 68707318 - NM_017440 MDM1 1 0.49 0.21 13 4.29 71.4 18 4.9 No 62 1.24 Yes 0 0 No -43 0.51 No 27 77.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 68710391 - NM_017440 MDM1 1 413.88 22.88 72 11.22 87.85 27 5.1 No 25 1.72 Yes 26 0.8 Yes -26 0.69 Yes 44 77.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 68712867 - NM_017440 MDM1 1 3.37 0.22 12 8.63 82.62 36 5.3 No 13 1.04 Yes 0 0 No -36 0.42 No 34 55.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 68716411 - NM_017440 MDM1 1 0.19 0.13 7 1.9 83.28 34 8.21 Yes 68 0.29 No 0 0 No -33 0.93 Yes 37 94.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 68719028 - NM_017440 MDM1 1 1.61 0.72 32 5.97 80.58 18 5.21 No 38 0.99 Yes 26 0.89 Yes -26 0.93 Yes 44 93.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 68719028 - NM_017440 MDM1 1 1.29 0.61 31 5.97 80.58 18 5.21 No 38 0.99 Yes 26 0.89 Yes -26 0.93 Yes 44 93.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 68721291 - NM_017440 MDM1 1 10.76 5.6 70 9.23 96.78 29 5.34 No 16 0.39 No 28 0.71 Yes -28 0.7 Yes 42 60.58 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 69207313 + NM_001145337 MDM2 1 0.02 0.28 17 -5.7 0 16 3.14 No 44 0.09 No 24 0.59 Yes -56 0.44 No 40 30.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 69207316 + NM_001145337 MDM2 1 0.15 1.58 52 -5.8 0 19 3.26 No 47 0.1 No 24 0.59 Yes -59 0.44 No 49 27.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 69207338 + NM_001145337 MDM2 1 0.05 0.47 24 1.64 0 30 5.57 Yes 17 0.22 No 19 0.56 Yes -30 0.46 No 43 57.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 69208382 + NM_001145337 MDM2 1 1.26 15.72 72 5.04 72.47 58 7.68 Yes 1 0.04 No 25 0.86 Yes -25 0.92 Yes 45 76.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 69209407 + NM_001145337 MDM2 1 2.09 30.53 72 8.51 86.62 21 7.21 Yes 8 1.25 Yes 20 0.83 Yes -20 0.88 Yes 50 92.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 69209409 + NM_001145337 MDM2 1 0.01 0.14 7 -1.05 83.39 23 7.35 Yes 10 1.25 Yes 0 0 No -22 0.92 Yes 48 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69210571 + NM_001145337 MDM2 1 0.01 0.15 10 3.85 84.29 26 5.1 No 13 1.6 Yes 22 0.87 Yes -25 0.87 Yes 45 95.52 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 69210682 + NM_001145337 MDM2 1 0.28 3.64 66 8.24 72.89 46 5.49 No 69 -6.07 No 0 0 No -28 0.39 No 40 55.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 69212566 + NM_001145337 MDM2 1 0.02 0.22 13 -4.39 0 9 3.87 No 25 1.11 Yes 0 0 No -37 0.69 Yes 33 69.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 69212693 + NM_001145337 MDM2 1 0.02 0.28 17 5.2 85.02 18 5.38 No 5 1.09 Yes 0 0 No -28 0.42 No 42 51.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 69212696 + NM_001145337 MDM2 1 0.03 0.31 17 3.25 80.12 21 5.65 Yes 8 1.06 Yes 0 0 No -20 0.67 Yes 50 65.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 69213732 + NM_001145337 MDM2 1 0.01 0.14 9 6.61 91.42 23 7.13 Yes 55 0.99 Yes 0 0 No -25 0.34 No 48 56.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 69214128 + NM_001145337 MDM2 1 0.02 0.28 16 4.4 80.9 30 4.85 No 54 0.97 Yes 0 0 No -27 0.76 Yes 12 77.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69214664 + NM_001145337 MDM2 1 0.01 0.13 8 7.59 87.29 27 5.24 No 53 0.9 Yes 0 0 No -26 0.75 Yes 44 87.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69214922 + NM_001145337 MDM2 1 0.02 0.19 11 6.5 86.2 22 6.54 Yes 9 1.17 Yes 0 0 No -21 0.92 Yes 49 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69217194 + NM_001145337 MDM2 1 0.04 0.35 20 5.82 79.45 46 6.87 Yes 33 1.22 Yes 0 0 No -41 0.58 No 29 82.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 69220580 + NM_001145337 MDM2 1 0.02 0.18 10 4.59 82.24 26 5.18 No 13 0.45 No 0 0 No -25 0.83 Yes 45 86.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 69222521 + NM_001145337 MDM2 1 0.07 0.76 34 -1.14 0 33 5.67 Yes 58 0.9 Yes 0 0 No -32 0.8 Yes 38 76.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69222544 + NM_001145337 MDM2 1 0.11 1.33 48 4.03 0 33 5.61 Yes 66 0.63 No 0 0 No -22 0.75 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 69222553 + NM_001145337 MDM2 1 0.65 7.19 72 0.68 65.61 42 6.35 Yes 75 0.61 No 0 0 No -31 0.73 Yes 39 62.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 69222632 + NM_001145337 MDM2 1 0.04 0.5 24 1.98 71.57 29 5.74 Yes 16 1.1 Yes 0 0 No -28 0.91 Yes 42 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69235611 + NM_001145337 MDM2 1 0.03 0.28 15 4.54 82.04 21 3.92 No 50 0.71 No 0 0 No -27 0.86 Yes 43 89.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 69230759 + NM_001145337 MDM2 1 0.03 0.31 18 11.05 98.16 28 7 Yes 15 0.65 No 0 0 No -27 0.77 Yes 43 79.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 69231164 + NM_001145337 MDM2 1 0.04 0.56 24 2.32 0 28 8.26 Yes 15 0.66 No 0 0 No -34 0.49 No 36 50.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 69231325 + NM_001145337 MDM2 1 0.05 0.65 31 7.14 86.16 20 5.54 No 7 1.07 Yes 0 0 No -19 0.66 No 51 87.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 69233115 + NM_001145337 MDM2 1 0.1 1.31 48 6.17 74.46 35 5.8 Yes 74 1.85 Yes 0 0 No -42 0.46 No 41 33.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 204487543 + NM_002393 MDM4 1 0.57 0.43 26 7.91 85.47 34 6.62 Yes 21 0.98 Yes 0 0 No -33 0.74 Yes 37 89.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 204495462 + NM_002393 MDM4 1 0.12 0.14 8 1.42 54.82 26 5.55 No 13 -2.25 No 24 0.51 Yes -17 0.33 No 45 32.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 204506586 + NM_002393 MDM4 1 0.14 0.18 8 5.86 86.67 21 5.2 No 8 0.85 Yes 20 0.87 Yes -20 0.84 Yes 50 86.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 204497222 + NM_002393 MDM4 1 1.08 1.26 49 11.23 85.86 31 4.88 No 51 0.54 No 0 0 No -34 0.76 Yes 36 82.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 204499862 + NM_002393 MDM4 1 0.26 0.32 19 -0.74 72.46 25 4.5 No 50 -5.14 No 0 0 No -24 0.74 Yes 46 62.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 204499865 + NM_002393 MDM4 1 0.14 0.21 12 0.63 85.61 28 4.78 No 53 -5.34 No 0 0 No -27 0.67 Yes 49 36.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 204501896 + NM_002393 MDM4 1 1.4 1.39 52 1.92 75.66 38 7.83 Yes 25 0.9 Yes 37 0.76 Yes -38 0.75 Yes 32 91.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 204503642 + NM_002393 MDM4 1 0.13 0.13 8 4.19 0 42 6.86 Yes 74 1.1 Yes 0 0 No -44 0.36 No 26 56.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 204505560 + NM_002393 MDM4 1 0.24 0.25 16 9.06 82.81 36 5.12 No 35 0.89 Yes 0 0 No -23 0.56 No 47 30.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 204506586 + NM_002393 MDM4 1 4.95 5.28 71 5.86 86.67 21 5.2 No 8 0.85 Yes 20 0.87 Yes -20 0.84 Yes 50 86.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 90354127 - NM_014611 MDN1 1 1.14 0.85 42 11.54 90.62 22 6.48 Yes 74 -3.41 No 0 0 No -28 0.48 No 49 59.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 90360564 - NM_014611 MDN1 1 0.3 0.18 12 -9.09 69.67 28 5.83 Yes 15 1.32 Yes 0 0 No -23 0.6 No 47 70.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 90360868 - NM_014611 MDN1 1 0.3 0.19 11 8.86 88.27 29 6.32 Yes 16 1.35 Yes 0 0 No -28 0.93 Yes 42 95.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 90363722 - NM_014611 MDN1 1 0.87 0.53 30 4.68 77.66 28 6.78 Yes 63 0.26 No 0 0 No -27 0.48 No 39 48.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 90368087 - NM_014611 MDN1 1 0.23 0.17 12 -14.07 67.46 31 6.61 Yes 18 0.74 No 0 0 No -30 0.5 No 40 74.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 90372684 - NM_014611 MDN1 1 2.27 1.43 48 0.39 75.63 26 4.92 No 13 0.89 Yes 0 0 No -25 0.66 Yes 45 66.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 90378163 - NM_014611 MDN1 1 0.24 0.13 8 4.16 79.44 36 4.6 No 55 1.99 Yes 0 0 No -31 0.93 Yes 39 93.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 90382080 - NM_014611 MDN1 1 1.2 0.99 41 -9.95 0 14 3.92 No 26 0.19 No 0 0 No -38 0.96 Yes 32 91.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 90382087 - NM_014611 MDN1 1 0.37 0.29 17 -11.6 60.64 55 6.64 Yes -2 0.23 No 35 0.79 Yes -31 0.96 Yes 39 93.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 90383090 - NM_014611 MDN1 1 0.44 0.24 14 9.5 94.25 24 5.23 No 49 1.2 Yes 0 0 No -21 0.8 Yes 49 78.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 90399853 - NM_014611 MDN1 1 0.33 0.19 11 1.72 0 15 4.36 No 11 1.65 Yes 0 0 No -23 0.54 No 47 67.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 90409903 - NM_014611 MDN1 1 1.34 0.9 39 8.09 84.99 28 4.88 No 41 1.35 Yes 0 0 No -27 0.6 No 43 57.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 90416842 - NM_014611 MDN1 1 0.22 0.15 11 6.09 84.12 42 5.94 Yes 29 1.3 Yes 0 0 No -20 0.46 No 50 53.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 90426027 - NM_014611 MDN1 1 0.11 0.11 7 7.04 97.35 23 4.9 No 50 -1.78 No 0 0 No -22 0.95 Yes 48 90.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 90432879 - NM_014611 MDN1 1 0.25 0.17 11 5.93 88.83 24 5.2 No 11 0.02 No 22 0.81 Yes -23 0.67 Yes 47 70.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 90437665 - NM_014611 MDN1 1 0.19 0.14 9 -3.76 0 15 4.35 No 30 1.2 Yes 0 0 No -43 0.49 No 28 71.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 90453409 - NM_014611 MDN1 1 0.22 0.11 8 1.92 84.99 30 5.83 Yes 17 0.82 Yes 0 0 No -29 0.93 Yes 41 90.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 90468069 - NM_014611 MDN1 1 0.1 0.1 7 -9.06 73.82 18 5.25 No 5 0.71 No 0 0 No -27 0.83 Yes 43 72.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 90478766 - NM_014611 MDN1 1 0.18 0.14 9 4.04 0 45 8.18 Yes 32 0.63 No 0 0 No -33 0.57 No 37 63.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 90478770 - NM_014611 MDN1 1 0.55 0.42 22 9.78 85.05 41 7.93 Yes 28 0.64 No 0 0 No -29 0.63 No 41 59.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 90484747 - NM_014611 MDN1 1 0.65 0.39 24 13.3 89.03 23 6.32 Yes 10 1.5 Yes 0 0 No -22 0.86 Yes 48 83.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 90489989 - NM_014611 MDN1 1 0.22 0.14 9 5.13 68.65 28 5.06 No 68 0.94 Yes 0 0 No -28 0.43 No 11 27.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 90504428 - NM_014611 MDN1 1 0.21 0.15 10 1.76 67.87 23 5 No 71 0.01 No 0 0 No -22 0.89 Yes 48 84.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 90520681 - NM_014611 MDN1 1 0.33 0.14 9 7.95 92.07 21 4.68 No 8 1.06 Yes 0 0 No -29 0.59 No 41 58.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 83947540 - NM_002395 ME1 1 0.18 0.17 9 -0.37 0 13 3.4 No 22 0.27 No 0 0 No -41 0.35 No 29 65.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 83985808 - NM_002395 ME1 1 0.77 0.38 20 8.18 82.86 21 5.46 No 8 0.97 Yes 0 0 No -20 0.63 No 50 85.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 83985873 - NM_002395 ME1 1 7.41 4.24 65 6.62 94.44 18 5.25 No 72 0.53 No 0 0 No -23 0.9 Yes 47 89.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 83985873 - NM_002395 ME1 1 0.62 0.36 20 6.62 94.44 18 5.25 No 72 0.53 No 0 0 No -23 0.9 Yes 47 89.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 84092041 - NM_002395 ME1 1 0.49 0.44 26 10.39 86.83 42 7.85 Yes 29 1.45 Yes 0 0 No -32 0.88 Yes 38 80.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 84112022 - NM_002395 ME1 1 0.16 0.18 12 6.64 77.26 38 6.47 Yes 25 0.11 No 0 0 No -37 0.51 No 42 60.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 48413074 + NM_002396 ME2 1 0.09 0.19 9 5.03 72.74 41 4.72 No 9 0.92 Yes 0 0 No -35 0.51 No 35 62.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 48413800 + NM_002396 ME2 1 0.06 0.14 9 4.79 91.04 21 5.1 No 8 0.66 No 0 0 No -20 0.79 Yes 50 67.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 48439172 + NM_002396 ME2 1 0.09 0.35 18 -11.35 0 35 6.07 Yes 22 1.16 Yes 0 0 No -30 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 48440493 + NM_002396 ME2 1 0.13 0.31 18 6.26 70.39 37 8.47 Yes 24 1.43 Yes 0 0 No -36 0.54 No 34 82.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 48443813 + NM_002396 ME2 1 0.1 0.26 16 6.07 87.38 27 5.48 No 73 -3.01 No 0 0 No -26 0.82 Yes 44 76.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 48446827 + NM_002396 ME2 1 0.03 0.13 8 -10.53 0 49 7.24 Yes 36 0.14 No 0 0 No -25 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 48465941 + NM_002396 ME2 1 0.1 0.35 20 -18.24 0 23 5.37 No 75 0.4 No 0 0 No -26 0.6 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 48465999 + NM_002396 ME2 1 0.07 0.26 17 -1.18 0 16 4.47 No 3 0.92 Yes 0 0 No -15 0.66 No 55 80.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 48469069 + NM_002396 ME2 1 0.04 0.18 11 6.31 80.72 26 5.29 No 13 1.33 Yes 0 0 No -25 0.91 Yes 45 95.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 48471507 + NM_002396 ME2 1 0.03 0.11 7 3.17 83.14 31 6.08 Yes 45 0.86 Yes 0 0 No -30 0.84 Yes 40 90.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 48473432 + NM_002396 ME2 1 0.24 1.03 44 3.84 80.99 25 6.84 Yes 52 1.79 Yes 0 0 No -24 0.82 Yes 46 91.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 37959416 - NR_073092 MEAF6 1 0.72 1.49 49 9.34 80.42 24 6.16 Yes 11 1.95 Yes 23 0.98 Yes -23 0.91 Yes 47 96.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 37974921 - NR_073092 MEAF6 1 0.09 0.18 13 -0.52 0 25 5.92 Yes 12 1.1 Yes 0 0 No -25 0.63 No 46 51.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 37975143 - NR_073092 MEAF6 1 0.11 0.21 14 -10.83 0 27 3.62 No 14 0.5 No 0 0 No -26 0.93 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153305355 - NM_004992 MECP2 1 1.04 0.65 33 5.08 86.41 25 3.94 No 31 0.85 Yes 20 0.77 Yes -20 0.75 Yes 50 52.69 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 153314112 - NM_004992 MECP2 1 0.45 0.26 15 7.05 70.62 28 4.93 No 28 -0.83 No 0 0 No -22 0.53 No 49 60.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153317034 - NM_004992 MECP2 1 0.34 0.18 10 6.32 68.65 22 6.05 Yes 6 0.46 No 0 0 No -21 0.82 Yes 49 66.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153323974 - NM_004992 MECP2 1 0.64 0.38 21 5.37 87.33 17 4.69 No 4 0.64 No 0 0 No -16 0.65 No 54 61.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153323987 - NM_004992 MECP2 1 0.17 0.1 7 -0.56 72.05 16 4.69 No 57 0.57 No 0 0 No -19 0.49 No 51 57.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153326859 - NM_004992 MECP2 1 0.18 0.11 7 8.68 86.89 31 5.48 No 62 1.73 Yes 0 0 No -25 0.58 No 45 73.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 153356640 - NM_004992 MECP2 1 6.73 4.03 68 8.11 82.11 25 5.57 Yes 12 1.48 Yes 0 0 No -24 0.76 Yes 46 84.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 29520615 - NM_001024732 MECR 1 0.24 0.13 9 7.71 87.08 22 5.1 No 9 0.97 Yes 0 0 No -21 0.88 Yes 49 87.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 29520687 - NM_001024732 MECR 1 0.6 0.32 20 -1.4 0 27 7.16 Yes 14 1.21 Yes 0 0 No -26 0.66 No 44 60.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 29522555 - NM_001024732 MECR 1 0.84 0.46 25 6.18 87 17 4.69 No 4 0.59 No 28 0.75 Yes -21 0.49 No 54 57.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 29528031 - NM_001024732 MECR 1 3.76 1.67 56 9.32 90.79 26 5.4 No 69 1.77 Yes 25 0.89 Yes -25 0.73 Yes 45 58.17 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 29538921 - NM_001024732 MECR 1 0.2 0.14 9 1.78 0 37 6.93 Yes 24 1.03 Yes 0 0 No -36 0.83 Yes 34 89.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 29543198 - NM_001024732 MECR 1 470.69 29.64 72 6.92 71.53 33 6.9 Yes 20 0.35 No 32 0.5 Yes -30 0.69 Yes 40 79.78 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 29547432 - NM_001024732 MECR 1 1.26 0.13 8 -3.85 82.43 22 4.88 No 9 1.03 Yes 19 0.87 Yes -21 0.84 Yes 49 74.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 29547434 - NM_001024732 MECR 1 24.66 1.51 54 4.87 86.82 20 4.67 No 7 1.04 Yes 19 0.87 Yes -19 0.84 Yes 51 73.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 29549773 - NM_001024732 MECR 1 10.75 0.74 35 4.39 78.27 58 7.8 Yes 45 0.73 No 25 0.11 Yes -57 0.54 No 13 85.2 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 29552828 - NM_001024732 MECR 1 15.68 1.06 41 13.87 89.99 35 6.36 Yes 22 -1.34 No 0 0 No -25 0.55 No 45 71.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 29556919 - NM_001024732 MECR 1 3.78 0.28 15 9.05 85.59 20 5.69 Yes 7 0.68 No 23 0.8 Yes -23 0.62 No 51 59.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 37586471 - NM_004774 MED1 1 0.07 0.13 8 2.24 80.12 20 7.14 Yes 7 1.21 Yes 0 0 No -19 0.73 Yes 51 77.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37588593 - NM_004774 MED1 1 0.16 0.17 10 4.74 84.41 26 8.23 Yes 13 0.61 No 0 0 No -25 0.84 Yes 45 86.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37597215 - NM_004774 MED1 1 0.14 0.21 13 5.03 75.76 29 4.47 No 10 1.2 Yes 0 0 No -28 0.67 Yes 42 66.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 37599879 - NM_004774 MED1 1 0.51 0.65 34 -11.49 61.24 38 8.79 Yes 19 0.53 No 0 0 No -31 0.81 Yes 33 72.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37601823 - NM_004774 MED1 1 1.87 2.32 60 7.48 87.31 69 8.44 Yes 10 1.36 Yes 28 0.89 Yes -28 0.65 No 42 64.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 6377722 - NM_032286 MED10 1 0.08 0.14 7 10.38 90.96 27 5.39 No 18 0.38 No 0 0 No -30 0.28 No 51 45.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 70339188 + NM_005120 MED12 1 0.44 0.18 11 8.48 76.37 58 8.79 Yes 45 1.93 Yes 22 0.69 Yes -57 0.83 Yes 13 91.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 70339540 + NM_005120 MED12 1 0.28 0.19 9 3.24 0 28 5.82 Yes 15 0.85 Yes 0 0 No -27 0.89 Yes 43 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70344128 + NM_005120 MED12 1 0.51 0.38 23 -2.03 79.06 56 9.1 Yes 43 0.58 No 0 0 No -28 0.73 Yes 42 54.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 70347697 + NM_005120 MED12 1 0.22 0.17 11 4.62 78.78 53 8.55 Yes 40 2.3 Yes 0 0 No -52 0.91 Yes 18 94.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70347700 + NM_005120 MED12 1 0.75 0.53 31 4.24 81.88 56 8.72 Yes 43 2.3 Yes 33 0.8 Yes -55 0.95 Yes 15 95.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 70357410 + NM_005120 MED12 1 0.91 0.18 11 8.16 85.81 34 5.57 Yes 21 0.75 No 24 0.87 Yes -27 0.86 Yes 43 59.98 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 70361082 + NM_005120 MED12 1 5.4 0.32 18 4.37 84.58 27 5.66 Yes 72 1.3 Yes 0 0 No -26 0.84 Yes 44 76.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 60030825 - NM_005121 MED13 1 1.64 2 59 8.71 81.03 25 7.76 Yes 12 2.46 Yes 0 0 No -24 0.76 Yes 46 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 60032630 - NM_005121 MED13 1 0.09 0.11 7 6.77 76.7 46 8.96 Yes 24 0.4 No 0 0 No -30 0.54 No 40 59.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 60040198 - NM_005121 MED13 1 0.24 0.26 15 1.2 72.56 11 4.88 No -2 1.29 Yes 0 0 No -24 0.46 No 48 29.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 60042523 - NM_005121 MED13 1 0.11 0.18 13 5.7 77.82 29 6.85 Yes 16 0.67 No 0 0 No -36 0.52 No 34 62.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 60043967 - NM_005121 MED13 1 0.12 0.13 7 6.73 77 31 5.09 No 62 1.42 Yes 0 0 No -27 0.58 No 43 71.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 60050197 - NM_005121 MED13 1 0.32 0.56 29 6.96 87.29 35 6.24 Yes 67 0.54 No 0 0 No -34 0.83 Yes 36 91.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 60059748 - NM_005121 MED13 1 0.09 0.13 9 1.89 71.99 25 6.32 Yes 12 1.42 Yes 0 0 No -24 0.73 Yes 46 87.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 60061686 - NM_005121 MED13 1 0.11 0.15 8 3.86 71.53 19 5.33 No 56 0.58 No 0 0 No -25 0.74 Yes 45 76.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 60063847 - NM_005121 MED13 1 0.75 1.1 46 7.06 78.25 29 6.36 Yes 2 1.08 Yes 0 0 No -28 0.36 No 42 54.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 60065420 - NM_005121 MED13 1 0.07 0.13 8 7.44 86.3 32 6.4 Yes 19 0.83 Yes 0 0 No -31 0.77 Yes 39 88.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 60065996 - NM_005121 MED13 1 0.07 0.13 9 7.98 80.59 22 5.29 No 9 0.66 No 0 0 No -26 0.84 Yes 44 85.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 60072644 - NM_005121 MED13 1 0.23 0.33 21 0.21 0 19 4.33 No 68 -5.01 No 0 0 No -18 0.6 No 46 40.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 60100364 - NM_005121 MED13 1 0.7 1.08 51 5.36 86.73 20 5.77 Yes 15 0.28 No 0 0 No -27 0.78 Yes 43 80.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 60101012 - NM_005121 MED13 1 0.85 1.32 47 11.25 90.61 43 7.73 Yes 30 1.01 Yes 0 0 No -42 0.82 Yes 28 74.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 60107399 - NM_005121 MED13 1 0.29 0.42 26 9.27 90.13 35 8.44 Yes 22 0.76 No 26 0.68 Yes -34 0.41 No 41 46.59 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 60109835 - NM_005121 MED13 1 0.19 0.5 26 1.41 82.57 40 4.93 No 45 1.13 Yes 29 0.87 Yes -29 0.89 Yes 41 90.37 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 60110511 - NM_005121 MED13 1 0.05 0.14 8 4.06 87.36 22 7.06 Yes 9 0.37 No 0 0 No -26 0.72 Yes 44 71.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 60111221 - NM_005121 MED13 1 0.37 0.78 40 4.49 79.49 14 5.89 Yes 26 0.18 No 24 0.8 Yes -23 0.5 No 47 62.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 60111307 - NM_005121 MED13 1 1.03 2.13 61 4.65 83.43 17 6.81 Yes 4 0.79 Yes 0 0 No -32 0.57 No 38 74.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 60111307 - NM_005121 MED13 1 0.05 0.1 7 4.65 83.43 17 6.81 Yes 4 0.79 Yes 0 0 No -32 0.57 No 38 74.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 60130064 - NM_005121 MED13 1 0.98 1.18 47 0.67 80.08 37 5.63 Yes 60 1.83 Yes 0 0 No -33 0.36 No 34 63.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 60140584 - NM_005121 MED13 1 1.05 1.25 52 6.91 84.56 32 6.69 Yes 69 -2.41 No 0 0 No -31 0.47 No 39 65.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 116400311 - NM_015335 MED13L 1 1.03 0.29 14 6.53 87.88 24 5.93 Yes 11 0.33 No 0 0 No -23 0.82 Yes 47 80.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 116413155 - NM_015335 MED13L 1 1.16 0.31 18 6.28 82.37 17 4.98 No -2 1.09 Yes 30 0.86 Yes -30 0.62 No 47 78.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 116435033 - NM_015335 MED13L 1 8.72 3.11 66 4.63 88.21 33 7.27 Yes 20 0.6 No 0 0 No -32 0.64 No 38 56.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 116528919 - NM_015335 MED13L 1 2.22 0.6 32 3.01 0 33 7.61 Yes 20 1.09 Yes 0 0 No -32 0.68 Yes 38 82.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 116547675 - NM_015335 MED13L 1 0.42 0.14 8 8.61 74.02 37 6.16 Yes 24 1.87 Yes 0 0 No -36 0.89 Yes 34 95.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 40508925 - NM_004229 MED14 1 1.7 1.72 56 8.06 93.95 35 5.03 No 15 0.49 No 37 0.57 Yes -27 0.62 No 36 57.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 40518854 - NM_004229 MED14 1 0.08 0.13 7 2.24 0 15 3.85 No 50 1.61 Yes 0 0 No -30 0.78 Yes 32 76.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 40526960 - NM_004229 MED14 1 0.14 0.18 10 6.87 77.13 40 7.54 Yes 27 2.36 Yes 0 0 No -39 0.85 Yes 31 95.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 40551230 - NM_004229 MED14 1 0.2 0.17 10 9 87.88 31 7.88 Yes 18 0.42 No 0 0 No -25 0.47 No 37 53.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 40562738 - NM_004229 MED14 1 0.51 0.94 41 7.13 74.98 28 5.28 No 15 0.09 No 0 0 No -27 0.78 Yes 43 94.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 40569375 - NM_004229 MED14 1 0.13 0.11 8 4.08 0 10 4 No 27 0.31 No 0 0 No -26 0.89 Yes 44 79.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 40574473 - NM_004229 MED14 1 1.72 2.36 60 4.36 83.96 56 7.87 Yes 2 -1.34 No 0 0 No -24 0.57 No 46 69.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 40585848 - NM_004229 MED14 1 0.16 0.22 9 6.93 87.31 47 5.25 No 57 0.99 Yes 0 0 No -23 0.46 No 47 61.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 20893031 + NM_001293237 MED15 1 0.14 0.15 9 6.9 88.48 23 5.2 No 10 1.08 Yes 0 0 No -22 0.89 Yes 48 95.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20893406 + NM_001293237 MED15 1 0.09 0.1 7 12.19 86.87 23 7.74 Yes 57 0.44 No 0 0 No -29 0.7 Yes 41 67.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 20906825 + NM_001293237 MED15 1 0.21 0.26 19 9.86 96.1 19 4.29 No 70 -3.76 No 22 0.43 Yes -24 0.57 No 46 67.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 20918741 + NM_001293237 MED15 1 0.42 0.26 16 1.71 0 31 8.19 Yes 18 1.64 Yes 0 0 No -30 0.86 Yes 40 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20925599 + NM_001293237 MED15 1 11.81 2.56 62 9.99 87.85 55 7.8 Yes 42 1.36 Yes 0 0 No -29 0.82 Yes 32 42.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 20928071 + NM_001293237 MED15 1 2.98 0.68 29 7.49 89.1 13 5.99 Yes 0 1.57 Yes 0 0 No -22 0.95 Yes 48 88.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20929399 + NM_001293237 MED15 1 83.41 18.56 72 7.79 76.23 49 6.44 Yes 18 1.14 Yes 30 0.71 Yes -30 0.78 Yes 37 73.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 20936945 + NM_001293237 MED15 1 1.3 0.31 19 2.27 66.05 28 6.29 Yes 53 1.2 Yes 0 0 No -27 0.79 Yes 43 72.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20936948 + NM_001293237 MED15 1 3.15 0.71 38 3.06 71.26 31 6.51 Yes 56 1.2 Yes 0 0 No -30 0.75 Yes 40 61.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 20937153 + NM_001293237 MED15 1 0.35 0.15 9 6.06 73.73 13 6 Yes 40 1.18 Yes 0 0 No -29 0.46 No 18 85.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 20937620 + NM_001293237 MED15 1 0.41 0.39 23 4.9 0 29 5.92 Yes 16 0.26 No 24 0.95 Yes -28 0.96 Yes 42 97.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 20939271 + NM_001293237 MED15 1 0.28 0.22 14 4.86 80.16 42 9.17 Yes 29 2.06 Yes 0 0 No -41 0.64 No 29 86.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 20939519 + NM_001293237 MED15 1 0.11 0.11 8 7.59 86.15 24 6.4 Yes 11 0.62 No 0 0 No -23 0.52 No 47 52.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 883643 - NM_005481 MED16 1 0.1 0.13 8 10.49 84.94 24 6.63 Yes NA NA NA 0 0 No -23 0.58 No 47 83.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 885600 - NM_005481 MED16 1 0.14 0.14 9 7.86 84.45 19 5.65 Yes 58 0.1 No 0 0 No -23 0.39 No 52 34.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 890287 - NM_005481 MED16 1 0.37 0.5 28 7.78 87.18 18 5.29 No 5 0.36 No 20 0.94 Yes -17 0.7 Yes 53 71.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 93523425 + NM_004268 MED17 1 0.16 0.21 12 6.4 82.44 22 6.27 Yes 74 -5.5 No 28 0.67 Yes -26 0.32 No 44 50.02 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 93523711 + NM_004268 MED17 1 0.09 0.11 7 6.42 73.17 29 5.25 No 45 0.95 Yes 22 0.63 Yes -28 0.55 No 42 83.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 93527415 + NM_004268 MED17 1 1.39 1.94 54 6.77 90.92 28 5.21 No 69 -2.16 No 27 0.75 Yes -27 0.67 Yes 18 49.61 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 93540666 + NM_004268 MED17 1 0.75 0.6 34 6.14 79.2 25 5.89 Yes 43 1.58 Yes 25 0.8 Yes -24 0.37 No 46 59.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 93542863 + NM_004268 MED17 1 0.16 0.13 8 -3.7 0 33 5.83 Yes 1 1.01 Yes 26 0.78 Yes -27 0.53 No 38 55.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 57471851 - NM_001317078 MED19 1 0.45 0.19 10 2.68 75.21 23 5.2 No 19 1.33 Yes 0 0 No -22 0.39 No 48 35.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 57472108 - NM_001317078 MED19 1 2.46 0.93 39 7.57 78.25 31 8.25 Yes 52 -1.74 No 30 0.86 Yes -30 0.69 Yes 40 77.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 27180266 + NR_073464 MED21 1 0.08 0.11 7 2.29 78.82 28 5.11 No 41 0.9 Yes 22 0.95 Yes -27 0.72 Yes 43 47.94 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 27180281 + NR_073464 MED21 1 0.28 0.42 22 -7.74 78.13 25 4.9 No 12 0.98 Yes 0 0 No -24 0.77 Yes 46 81.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 131912687 - NM_015979 MED23 1 0.25 0.19 11 3.89 77.22 15 4.34 No 2 0.55 No 24 0.94 Yes -21 0.84 Yes 49 81.08 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 131914321 - NM_015979 MED23 1 0.22 0.19 11 -4.29 0 28 5.42 No 71 0.66 No 27 0.59 Yes -17 0.35 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 131916119 - NM_015979 MED23 1 0.14 0.1 7 8.67 82.51 24 4.54 No 23 0.52 No 0 0 No -23 0.62 No 46 43.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 131920651 - NM_015979 MED23 1 0.58 0.36 20 10.13 82.78 35 5.92 Yes 10 0.47 No 0 0 No -22 0.38 No 36 64.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 131926537 - NM_015979 MED23 1 0.71 0.6 33 4.25 76.64 46 6.77 Yes 33 0.46 No 0 0 No -29 0.49 No 49 42.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 131926667 - NM_015979 MED23 1 0.15 0.13 9 -1.8 59.34 50 7.39 Yes 71 -4.88 No 33 0.81 Yes -35 0.37 No 35 20.75 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 38175919 - NM_001079518 MED24 1 0.16 0.19 11 2.17 70.62 24 4.84 No 52 -0.66 No 22 0.59 Yes -23 0.73 Yes 47 72.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 38176264 - NM_001079518 MED24 1 0.28 0.46 22 11.9 90.7 27 5.74 Yes 38 1.99 Yes 26 0.95 Yes -26 0.91 Yes 44 90.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 38176604 - NM_001079518 MED24 1 15.85 17.61 72 5.79 76.6 30 5.64 Yes 76 -1.49 No 0 0 No -21 0.58 No 41 75.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 38176736 - NM_001079518 MED24 1 2.28 2.56 67 8.9 86.07 41 6.73 Yes 28 0.46 No 31 0.6 Yes -31 0.66 No 39 65.21 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 38176873 - NM_001079518 MED24 1 0.91 1.06 38 6.53 86.16 20 5.57 Yes 7 1.07 Yes 19 0.71 Yes -19 0.66 Yes 51 85.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 38179687 - NM_001079518 MED24 1 0.1 0.13 7 8.45 80.19 50 7.01 Yes 48 0.31 No 23 0.85 Yes -35 0.8 Yes 35 94.26 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 38184265 - NM_001079518 MED24 1 0.64 1 41 3.79 62.64 34 5.74 Yes 25 0.9 Yes 0 0 No -33 0.62 No 44 54.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38185258 - NM_001079518 MED24 1 2.46 3.72 69 1.34 68.14 30 6 Yes 65 -5.78 No 22 0.75 Yes -29 0.63 No 41 48.98 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 38191226 - NM_001079518 MED24 1 9.94 10.49 72 4.66 75.38 36 7.07 Yes 23 1.28 Yes 35 0.69 Yes -35 0.7 Yes 40 76.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 38209889 - NM_001079518 MED24 1 76.88 38.79 72 6.3 75.13 25 5.57 Yes 26 1.43 Yes 24 0.83 Yes -24 0.87 Yes 46 90.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 38209933 - NM_001079518 MED24 1 2.95 1.51 56 8.36 76.02 57 7.59 Yes 44 0.74 No 26 0.85 Yes -26 0.46 No 44 55.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 38210022 - NM_001079518 MED24 1 9.45 4.74 70 8.04 82.08 26 5.47 No 13 1.6 Yes 25 0.98 Yes -25 0.94 Yes 45 93.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50333078 + NM_030973 MED25 1 0.88 0.57 33 4.73 72.56 27 6.52 Yes 47 1.19 Yes 0 0 No -26 0.63 No 44 60.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 50335534 + NM_030973 MED25 1 0.73 0.58 32 2.38 77.07 78 9.54 Yes 65 2.59 Yes 24 0.68 Yes -28 0.88 Yes 42 91.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50338598 + NM_030973 MED25 1 0.52 0.25 16 9.94 87.59 21 4.79 No 19 0.68 No 0 0 No -19 0.57 No 51 63.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50339488 + NM_030973 MED25 1 0.77 0.31 20 3.85 0 9 3.87 No 17 1.41 Yes 0 0 No -29 0.83 Yes 41 78.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16689070 - NM_004831 MED26 1 0.75 0.35 21 2.96 0 18 4.58 No 66 -4.5 No 0 0 No -18 0.71 Yes 53 60.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 16717852 - NM_004831 MED26 1 0.49 0.13 8 8.67 98.45 19 7.07 Yes 55 0.35 No 0 0 No -32 0.5 No 52 59.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 16738403 - NM_004831 MED26 1 0.71 0.22 12 10.24 87.62 33 5.66 Yes 20 0.52 No 0 0 No -25 0.76 Yes 45 56.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 134742584 - NM_004269 MED27 1 0.13 0.15 10 10.75 83.41 23 4.4 No 5 1.01 Yes 0 0 No -22 0.92 Yes 48 95.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134744772 - NM_004269 MED27 1 2.74 3.07 68 11.25 97.5 32 5.74 Yes 19 0.44 No 0 0 No -31 0.61 No 39 67.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 134763421 - NM_004269 MED27 1 0.33 0.22 12 5.81 78.19 28 4.59 No 35 1.4 Yes 0 0 No -27 0.41 No 43 35.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 134766285 - NM_004269 MED27 1 0.19 0.14 9 0.01 75.31 64 6.84 Yes 3 0.45 No 0 0 No -24 0.76 Yes 46 89.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134888639 - NM_004269 MED27 1 0.31 0.38 21 11.18 92.6 27 6.24 Yes 14 0.89 Yes 0 0 No -26 0.93 Yes 44 95.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134935761 - NM_004269 MED27 1 0.31 0.38 20 8.6 94.68 24 5.02 No 11 0.4 No 0 0 No -26 0.65 No 44 60.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 134949130 - NM_004269 MED27 1 1.06 1.32 45 8.8 95.65 19 6.12 Yes 13 1.03 Yes 0 0 No -25 0.88 Yes 45 94.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 17625203 + NM_025205 MED28 1 0.26 1.04 42 4.89 70.78 43 6.69 Yes 30 1.34 Yes 26 0.91 Yes -42 0.88 Yes 28 97.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39883287 + NM_017592 MED29 1 0.09 0.1 7 2.3 84.41 39 8 Yes 26 2.05 Yes 29 0.82 Yes -25 0.67 Yes 45 83.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39883291 + NM_017592 MED29 1 0.15 0.17 12 4.19 0 43 8.18 Yes 30 2.04 Yes 29 0.82 Yes -29 0.71 Yes 41 83.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 39888166 + NM_017592 MED29 1 0.32 0.29 20 6.51 76.99 28 4.31 No 45 -3.59 No 28 0.4 Yes -27 0.52 No 46 73.13 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 118548250 + NM_080651 MED30 1 0.25 0.33 19 11.55 86.49 40 8.15 Yes 27 1.24 Yes 0 0 No -40 0.48 No 49 58.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 118548339 + NM_080651 MED30 1 0.76 0.9 41 9.04 88.8 70 9.19 Yes 57 0.6 No 0 0 No -28 0.67 Yes 42 59.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 71053882 - NM_001284209 MED6 1 0.06 0.1 7 8.86 86.55 28 5.29 No 41 0.56 No 0 0 No -25 0.76 Yes 45 80.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 71054866 - NM_001284209 MED6 1 0.13 0.24 15 2.34 73.56 38 5.54 No 4 1.11 Yes 0 0 No -34 0.53 No 36 74.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 71054866 - NM_001284209 MED6 1 0.14 0.22 11 2.34 73.56 38 5.54 No 4 1.11 Yes 0 0 No -34 0.53 No 36 74.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 71056618 - NM_001284209 MED6 1 0.1 0.17 10 7.46 87.79 18 6.48 Yes 5 1.23 Yes 0 0 No -28 0.62 No 53 63.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 71063416 - NM_001284209 MED6 1 0.11 0.18 11 4.62 0 38 6.48 Yes 61 0.08 No 0 0 No -37 0.55 No 37 70.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 71065978 - NM_001284209 MED6 1 0.39 0.31 13 10.44 82.92 35 9.35 Yes 22 1.85 Yes 0 0 No -34 0.78 Yes 36 79.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43852339 - NM_052877 MED8 1 0.3 0.42 23 -3.97 63.63 31 6.76 Yes 18 0.81 Yes 0 0 No -30 0.84 Yes 40 87.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43852638 - NM_052877 MED8 1 1 2.18 60 4.04 81.45 23 5.29 No 10 0.4 No 18 0.79 Yes -22 0.85 Yes 48 78.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 43853279 - NM_052877 MED8 1 1.31 1.72 59 9.09 82.48 18 5.36 No 49 0.95 Yes 0 0 No -26 0.62 No 44 86.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 43853301 - NM_052877 MED8 1 1.17 1.57 54 5.3 79.97 24 4.08 No 27 0.95 Yes 23 0.81 Yes -39 0.56 No 31 60.57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 43854161 - NM_052877 MED8 1 2.82 1.15 46 7.71 86.53 35 7.61 Yes 22 0.99 Yes 23 0.74 Yes -23 0.8 Yes 47 90.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17388613 + NM_018019 MED9 1 1.21 0.5 24 7.28 85.02 37 8.24 Yes 24 -0.49 No 29 0.43 Yes -29 0.58 No 41 60.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 100109145 + NM_001130927 MEF2A 1 3.44 0.28 17 10.46 86.87 22 6.88 Yes 9 0.72 No 0 0 No -21 0.8 Yes 52 72.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 100138634 + NM_001130927 MEF2A 1 475.68 40.67 72 8.82 88.57 30 6.67 Yes 17 0.87 Yes 25 0.54 Yes -25 0.64 No 45 90.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 100161095 + NM_001130927 MEF2A 1 0.9 0.1 7 5.75 87.15 15 3.88 No 49 1.57 Yes 24 0.46 Yes -56 0.83 Yes 14 90.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 100211724 + NM_001130927 MEF2A 1 0.64 0.56 26 7.5 80.92 28 6.86 Yes 2 1.33 Yes 27 0.81 Yes -27 0.62 No 43 69.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 100211724 + NM_001130927 MEF2A 1 0.12 0.13 8 7.5 80.92 28 6.86 Yes 2 1.33 Yes 27 0.81 Yes -27 0.62 No 43 69.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 100218772 + NM_001130927 MEF2A 1 0.3 0.22 14 4.66 86.04 55 4.84 No 0 0.32 No 0 0 No -27 0.48 No 43 75.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 100218852 + NM_001130927 MEF2A 1 1.73 1.35 45 1.51 79.71 49 8.94 Yes 36 0.34 No 0 0 No -48 0.58 No 22 88.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 100230547 + NM_001130927 MEF2A 1 0.33 0.28 16 8.05 85.2 23 4.77 No 71 -3.87 No 0 0 No -22 0.6 No 50 56.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19257251 - NM_001145785 MEF2B 1 1.86 0.89 38 3.03 60.08 25 6.12 Yes 12 -1.54 No 21 0.91 Yes -24 0.39 No 46 65.75 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 19267952 - NM_001145785 MEF2B 1 9 9.31 72 7.67 82.59 36 6.07 Yes 41 -2.12 No 0 0 No -35 0.62 No 35 77.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 19268093 - NM_001145785 MEF2B 1 7.33 7.83 70 10.6 87.16 35 5.83 Yes 29 0.03 No 0 0 No -27 0.63 No 43 67.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19278153 - NM_001145785 MEF2B 1 0.1 0.13 7 3.01 0 31 6.48 Yes 18 1.42 Yes 0 0 No -30 0.86 Yes 40 94.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 88018645 - NM_001131005 MEF2C 1 8 18.17 72 -1.97 78.36 24 3.84 No 69 0.88 Yes 0 0 No -28 0.73 Yes 42 63.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 88018647 - NM_001131005 MEF2C 1 85.33 194.01 72 8.13 82.39 22 3.7 No 67 0.88 Yes 21 0.57 Yes -26 0.77 Yes 44 67.58 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 88018683 - NM_001131005 MEF2C 1 0.07 0.17 10 6.24 74.39 40 5.19 No 72 1.4 Yes 21 0.35 Yes -34 0.49 No 36 76.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 88057146 - NM_001131005 MEF2C 1 1104.91 356.69 72 5.6 83.14 25 6.16 Yes 42 1.26 Yes 24 0.61 Yes -24 0.7 Yes 46 52.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 88061827 - NM_001131005 MEF2C 1 0.48 0.14 9 7.24 81.47 73 10.02 Yes 1 0.84 Yes 0 0 No -29 0.86 Yes 41 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 88068179 - NM_001131005 MEF2C 1 1.71 0.56 30 6.44 80.79 23 6.69 Yes 10 0.82 Yes 0 0 No -27 0.52 No 48 62.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 88069055 - NM_001131005 MEF2C 1 2.2 0.74 36 3.43 88.73 20 3.68 No 22 0.89 Yes 0 0 No -23 0.71 Yes 47 67.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 88086673 - NM_001131005 MEF2C 1 8.43 2.58 60 9.16 84.58 29 9.53 Yes 58 0.99 Yes 0 0 No -28 0.89 Yes 42 80.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 88087137 - NM_001131005 MEF2C 1 0.3 0.1 7 4.81 71.85 76 8.72 Yes 40 1.01 Yes 0 0 No -35 0.52 No 18 68.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 88110407 - NM_001131005 MEF2C 1 0.05 0.25 13 6.93 86.53 34 5.72 Yes 21 1.48 Yes 0 0 No -33 0.63 No 37 68.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 88201518 + NR_136219 MEF2C-AS1 1 118.07 3.61 71 4.49 85.53 30 7.81 Yes 31 0.57 No 29 0.68 Yes -26 0.37 No 44 48.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 88212597 + NR_136219 MEF2C-AS1 1 4.48 0.1 7 5.54 79.86 31 6.92 Yes 18 0.68 No 0 0 No -30 0.86 Yes 40 91.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 88231261 + NR_136219 MEF2C-AS1 1 34.88 0.93 37 8.5 81.87 14 6.48 Yes 69 0.32 No 0 0 No -37 0.59 No 33 78.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 88236629 + NR_136219 MEF2C-AS1 1 22.81 0.78 37 9.37 87.64 24 5.1 No 11 0.81 Yes 23 0.91 Yes -23 0.9 Yes 47 94.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 88238832 + NR_136219 MEF2C-AS1 1 166.8 4.81 69 11.49 90.69 24 6.85 Yes 11 1.12 Yes 23 0.83 Yes -23 0.78 Yes 47 82.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 88243624 + NR_136219 MEF2C-AS1 1 17.76 0.5 27 -0.22 0 20 2.88 No 54 -3.63 No 0 0 No -19 0.77 Yes 51 52.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 88243952 + NR_136219 MEF2C-AS1 1 7.05 0.17 11 3.6 83.3 58 7.54 Yes -2 0.82 Yes 24 0.68 Yes -24 0.75 Yes 46 63.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 88249694 + NR_136219 MEF2C-AS1 1 6.19 0.24 14 7.55 90.04 62 9.85 Yes 32 0.66 No 0 0 No -29 0.89 Yes 41 95.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 156438840 - NM_005920 MEF2D 1 0.17 0.28 15 10.15 85.4 32 5.74 Yes 19 0.81 Yes 23 0.87 Yes -31 0.96 Yes 39 97.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156450570 - NM_005920 MEF2D 1 0.35 0.46 25 10.92 86.97 44 7.72 Yes 31 2.17 Yes 43 0.19 Yes -43 0.97 Yes 27 98.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156453211 - NM_005920 MEF2D 1 9.54 7.29 72 -6.75 0 15 4.24 No 15 1.38 Yes 0 0 No -30 0.82 Yes 40 88.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156465059 - NM_005920 MEF2D 1 0.35 0.29 20 3.3 89.3 23 4.78 No 61 0.44 No 0 0 No -22 0.85 Yes 48 61.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 156469288 - NM_005920 MEF2D 1 0.14 0.11 7 3.48 82.46 16 4.42 No 3 0.72 No 0 0 No -23 0.59 No 51 59.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 156469353 - NM_005920 MEF2D 1 2.17 1.75 53 8.13 93.19 23 4.9 No 24 -0.71 No 23 0.76 Yes -23 0.77 Yes 47 80.27 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42837807 + NM_001271938 MEGF8 1 1.07 0.24 15 6.83 81.58 40 6.78 Yes 48 1.82 Yes 0 0 No -21 0.55 No 49 65.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 42840363 + NM_001271938 MEGF8 1 2.41 0.29 15 6.84 81.85 41 8 Yes 67 -1.34 No 0 0 No -31 0.49 No 30 75.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 42841261 + NM_001271938 MEGF8 1 1.3 0.18 12 4.77 76.18 21 5.81 Yes NA NA NA 0 0 No -21 0.34 No 21 58.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 42852440 + NM_001271938 MEGF8 1 0.72 0.18 12 6.08 80.13 13 5.1 No 33 1.03 Yes 0 0 No -21 0.6 No 49 80.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 42857147 + NM_001271938 MEGF8 1 2.08 0.19 11 6.84 69.96 20 6.63 Yes 58 -2.2 No 0 0 No -19 0.77 Yes 51 75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 42880402 + NM_001271938 MEGF8 1 37.94 3.9 71 4.99 79.03 75 9.64 Yes 62 2.94 Yes 0 0 No -22 0.92 Yes 48 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42880402 + NM_001271938 MEGF8 1 10.07 1.08 46 4.99 79.03 75 9.64 Yes 62 2.94 Yes 0 0 No -22 0.92 Yes 48 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123367917 - NM_001080497 MEGF9 1 1.7 0.36 17 1.4 78.73 44 6.66 Yes 73 0.78 Yes 0 0 No -24 0.53 No 46 51.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123407126 - NM_001080497 MEGF9 1 1.06 0.17 10 5.65 80.82 27 5.1 No 34 0.57 No 0 0 No -25 0.55 No 45 52.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 42180297 + NM_152513 MEI1 1 0.75 0.29 13 2.86 95.07 14 3.5 No 51 -1.99 No 0 0 No -22 0.93 Yes 48 90.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 42180671 + NM_152513 MEI1 1 3.6 1.31 46 7.42 75.03 27 4.98 No 38 0.48 No 0 0 No -26 0.7 Yes 44 66.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 36573522 + NM_014791 MELK 1 0.3 0.15 9 7.02 84.33 31 5.92 Yes 18 0.91 Yes 0 0 No -30 0.87 Yes 40 86.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 36580069 + NM_014791 MELK 1 15.94 7.92 71 2.66 0 54 8.17 Yes 41 1.74 Yes 0 0 No -42 0.84 Yes 28 67.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 36594666 + NM_014791 MELK 1 0.99 1.15 47 6.06 83.79 18 5.74 Yes 48 0.8 Yes 0 0 No -17 0.48 No 53 63.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 36603986 + NM_014791 MELK 1 4.18 3.67 70 2.46 83.04 42 8.02 Yes 29 1.86 Yes 41 0.6 Yes -41 0.81 Yes 29 85.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 36604011 + NM_014791 MELK 1 1.78 1.47 54 5.5 90.92 28 5.29 No 54 1.85 Yes 0 0 No -27 0.77 Yes 43 49.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 36607575 + NM_014791 MELK 1 0.63 0.57 32 6.12 0 32 6.48 Yes 19 1.28 Yes 0 0 No -35 0.84 Yes 35 81.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 36616407 + NM_014791 MELK 1 0.09 0.13 9 10.15 89.4 30 6.55 Yes 17 0.23 No 0 0 No -34 0.41 No 41 48.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 36631843 + NM_014791 MELK 1 0.16 0.24 12 5.12 86.16 28 5.27 No 46 0.31 No 0 0 No -27 0.63 No 49 56.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 36632184 + NM_014791 MELK 1 0.62 1.01 45 2.8 66.14 22 5.78 Yes 9 0.87 Yes 0 0 No -21 0.55 No 45 51.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 36651785 + NM_014791 MELK 1 0.53 0.88 39 7 82.54 26 6.03 Yes 57 1.99 Yes 0 0 No -25 0.83 Yes 45 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 36654160 + NM_014791 MELK 1 0.68 0.64 32 7.75 90.43 53 6.78 Yes 24 1.24 Yes 0 0 No -27 0.57 No 45 49.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 36657214 + NM_014791 MELK 1 0.1 0.11 7 4.94 75.35 25 3.99 No 30 1.09 Yes 26 0.55 Yes -24 0.77 Yes 50 64.18 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 36669310 + NM_014791 MELK 1 0.12 0.22 14 -1.31 0 50 7.35 Yes -4 0.45 No 0 0 No -35 0.71 Yes 35 85.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196734316 - NM_005929 MELTF 1 0.7 0.29 16 9.94 82.41 24 5.92 Yes 28 0.95 Yes 0 0 No -32 0.43 No 47 58.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 196734902 - NM_005929 MELTF 1 0.71 0.32 15 7.11 83.87 39 7.68 Yes 26 1.9 Yes 0 0 No -34 0.83 Yes 36 82.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196735834 - NM_005929 MELTF 1 13.64 6.86 71 4.4 77.08 29 7.98 Yes 16 1.31 Yes 0 0 No -28 0.93 Yes 42 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196737657 - NM_005929 MELTF 1 0.37 0.14 9 -2.09 0 12 4.24 No -1 -0.8 No 0 0 No -33 0.71 Yes 37 77.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196739397 - NM_005929 MELTF 1 2.36 0.88 38 3 80.54 22 4.91 No 59 -4.89 No 0 0 No -21 0.93 Yes 49 82.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196744136 - NM_005929 MELTF 1 0.74 0.24 13 5.57 77.32 29 5.48 No 37 0.65 No 0 0 No -31 0.66 Yes 21 65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 196744252 - NM_005929 MELTF 1 0.5 0.15 8 0.34 72.37 32 7.4 Yes 19 0.65 No 0 0 No -31 0.85 Yes 39 74.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196746669 - NM_005929 MELTF 1 0.49 0.19 12 -4.95 0 72 8.24 Yes 12 1.47 Yes 0 0 No -24 0.82 Yes 46 69.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 196749380 - NM_005929 MELTF 1 0.51 0.29 17 8.09 85.35 33 6.08 Yes 47 1.67 Yes 0 0 No -32 0.82 Yes 38 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196749903 - NM_005929 MELTF 1 4 2.28 56 10.35 90.57 29 4.44 No 10 1.26 Yes 0 0 No -22 0.66 No 48 58.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 196750782 - NM_005929 MELTF 1 3.62 1.83 60 6.18 95.42 20 5.1 No 15 -1.09 No 22 0.8 Yes -27 0.59 No 48 79.25 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 196750805 - NM_005929 MELTF 1 0.47 0.25 17 10.12 89.11 25 5.57 Yes 21 -0.29 No 22 0.8 Yes -22 0.53 No 46 33.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 196752669 - NM_005929 MELTF 1 0.77 0.58 26 4.62 67.78 39 6.7 Yes 38 0.31 No 0 0 No -32 0.7 Yes 33 74.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196753048 - NM_005929 MELTF 1 1.14 0.79 39 3.78 82.63 26 6.8 Yes 13 1.06 Yes 0 0 No -25 0.9 Yes 45 88.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196753369 - NM_005929 MELTF 1 1.02 0.81 36 7.7 82.68 22 5.29 No 69 0.37 No 0 0 No -21 0.85 Yes 49 88.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196754993 - NM_005929 MELTF 1 0.37 0.17 9 4.04 79.9 22 5.29 No 9 1.21 Yes 0 0 No -21 0.87 Yes 49 86.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196755332 - NM_005929 MELTF 1 3.07 0.88 38 10.38 92.38 37 6.56 Yes 34 1.93 Yes 0 0 No -36 0.89 Yes 34 95.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32103957 - NM_015955 MEMO1 1 0.22 0.51 28 7.74 90.44 32 7.75 Yes 19 1.4 Yes 0 0 No -31 0.82 Yes 39 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32112157 - NM_015955 MEMO1 1 0.43 0.92 40 8.88 92.89 22 6.34 Yes 9 1.39 Yes 0 0 No -21 0.88 Yes 49 94.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32118391 - NM_015955 MEMO1 1 3.24 4.14 70 11.54 79.38 29 5.92 Yes -3 0.23 No 0 0 No -28 0.52 No 42 90.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 32137576 - NM_015955 MEMO1 1 0.11 0.18 9 3.01 0 32 10.64 Yes 19 0.92 Yes 0 0 No -32 0.48 No 33 61.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32143106 - NM_015955 MEMO1 1 0.04 0.11 8 -11.74 0 38 7.51 Yes 25 0.8 Yes 0 0 No -37 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32145917 - NM_015955 MEMO1 1 0.7 1.4 53 5.07 82.25 35 7.55 Yes 22 0.67 No 0 0 No -34 0.82 Yes 36 87.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32151909 - NM_015955 MEMO1 1 0.11 0.18 11 2.58 0 51 6.02 Yes 38 1.01 Yes 0 0 No -50 0.61 No 20 75.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 32168170 - NM_015955 MEMO1 1 0.12 0.17 10 4.43 85.02 17 6.84 Yes 71 0.03 No 0 0 No -27 0.4 No 43 53.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32168257 - NM_015955 MEMO1 1 0.29 0.39 23 6.5 86.2 22 6.77 Yes 9 1.12 Yes 0 0 No -21 0.96 Yes 49 91.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32175787 - NM_015955 MEMO1 1 1.53 1.5 54 4.58 84.41 29 5.96 Yes 38 0.97 Yes 0 0 No -28 0.68 Yes 42 58.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 32193157 - NM_015955 MEMO1 1 0.4 0.4 21 7.89 87.88 31 6.48 Yes 18 1.38 Yes 0 0 No -30 0.84 Yes 40 94.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64573486 - NM_130804 MEN1 1 2.18 1.56 54 8.06 94.37 17 7.72 Yes 4 1.32 Yes 23 0.95 Yes -46 0.59 No 24 65.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 64574689 - NM_130804 MEN1 1 0.23 0.17 11 1.32 67.55 28 5.47 No 71 2.25 Yes 0 0 No -27 0.93 Yes 43 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64574751 - NM_130804 MEN1 1 0.73 0.5 28 7.97 79.37 22 8.54 Yes 9 2.25 Yes 0 0 No -21 0.84 Yes 49 86.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64575251 - NM_130804 MEN1 1 0.16 0.1 7 5.41 69.92 33 5.58 Yes 67 -1.17 No 0 0 No -30 0.57 No 40 67.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 81274169 - NM_015154 MESDC2 1 0.43 0.99 39 6.79 83.55 28 5.29 No 27 0.45 No 0 0 No -27 0.68 Yes 43 71.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 81275229 - NM_015154 MESDC2 1 0.08 0.14 7 4.36 74.65 15 5.16 No 2 0.92 Yes 0 0 No -26 0.41 No 26 56.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 81275253 - NM_015154 MESDC2 1 0.11 0.15 9 8.56 80.84 14 7.08 Yes 1 0.13 No 0 0 No -28 0.55 No 50 68.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 81279559 - NM_015154 MESDC2 1 0.19 0.31 16 5.27 83.17 30 5.81 Yes 4 1.77 Yes 0 0 No -29 0.76 Yes 41 67.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 81279562 - NM_015154 MESDC2 1 0.15 0.22 11 7.81 81.33 27 5.67 Yes 1 1.77 Yes 0 0 No -26 0.76 Yes 44 63.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 99952658 + NM_015143 METAP1 1 0.09 0.15 8 4.52 90.27 31 5.01 No 48 1.17 Yes 30 0.78 Yes -30 0.84 Yes 40 81.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 99955383 + NM_015143 METAP1 1 2.29 2.96 66 4.07 72.33 62 7.79 Yes 49 2.08 Yes 23 0.86 Yes -26 0.92 Yes 44 79.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 99957104 + NM_015143 METAP1 1 0.87 1.07 43 3.48 76.96 34 6.35 Yes 21 1.18 Yes 33 0.73 Yes -33 0.46 No 37 60.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 99957193 + NM_015143 METAP1 1 0.71 0.9 39 9.31 80.67 34 6 Yes 66 0.98 Yes 33 0.82 Yes -33 0.77 Yes 37 90.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 99958917 + NM_015143 METAP1 1 0.09 0.11 8 12.6 90.95 19 6.4 Yes 31 0.16 No 34 0.18 Yes -23 0.67 Yes 52 44.33 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 99964456 + NM_015143 METAP1 1 1.02 2.28 63 3.13 69.82 22 7.02 Yes 2 -1.74 No 0 0 No -34 0.49 No 35 58.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 99981535 + NM_015143 METAP1 1 0.11 0.17 9 3.97 84.41 34 4.91 No 21 0.83 Yes 0 0 No -33 0.39 No 40 67.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 99982580 + NM_015143 METAP1 1 0.21 0.35 18 6.84 81.73 26 5.17 No 13 0.63 No 0 0 No -25 0.9 Yes 45 88.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 172938104 + NM_001322279 METAP1D 1 1.57 0.14 9 3.88 71.06 37 6.79 Yes 24 0.71 No 0 0 No -27 0.41 No 38 52.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 95869849 + NM_006838 METAP2 1 13 26.43 72 4.79 86.56 29 6.48 Yes 16 0.31 No 25 0.7 Yes -28 0.82 Yes 42 70.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 95875902 + NM_006838 METAP2 1 0.1 0.26 15 6.27 85.12 39 6.06 Yes 26 0.03 No 34 0.3 Yes -31 0.71 Yes 39 79.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 95879723 + NM_006838 METAP2 1 0.17 0.32 19 4.93 82.68 19 6.44 Yes 18 1.33 Yes 30 0.82 Yes -30 0.75 Yes 40 89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 95880297 + NM_006838 METAP2 1 0.14 0.5 27 3.01 0 28 6.47 Yes 15 0.98 Yes 0 0 No -27 0.77 Yes 43 72.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 95880318 + NM_006838 METAP2 1 0.03 0.14 8 6.47 83.55 28 4.14 No 36 0.99 Yes 0 0 No -49 0.3 No 22 63.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 58163207 - NM_005371 METTL1 1 0.23 0.17 9 2.22 0 20 3.91 No 42 1.44 Yes 25 0.87 Yes -54 0.52 No 45 61.86 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 58163219 - NM_005371 METTL1 1 0.47 0.22 15 4.17 72.55 43 7.55 Yes 30 1.45 Yes 25 0.87 Yes -25 0.67 Yes 28 81.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58163420 - NM_005371 METTL1 1 0.46 0.44 22 4.13 65.56 40 6.48 Yes 27 1.21 Yes 39 0.7 Yes -39 0.85 Yes 31 95.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58163420 - NM_005371 METTL1 1 0.23 0.22 10 4.13 65.56 40 6.48 Yes 27 1.21 Yes 39 0.7 Yes -39 0.85 Yes 31 95.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58165389 - NM_005371 METTL1 1 2.11 1.25 45 13.87 84.89 23 5.97 Yes 10 1.07 Yes 22 0.91 Yes -22 0.79 Yes 48 88.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 126454041 - NM_212554 METTL10 1 1.06 0.82 40 8.64 87.87 15 5.57 Yes 47 0.48 No 0 0 No -22 0.63 No 48 66.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 126454148 - NM_212554 METTL10 1 6.16 4.69 67 8.21 82.76 16 5.66 Yes 52 0.5 No 0 0 No -26 0.34 No 47 41.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 126454197 - NM_212554 METTL10 1 0.25 0.21 12 6.9 81.04 30 6 Yes 48 0.9 Yes 0 0 No -30 0.65 No 40 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 126455914 - NM_212554 METTL10 1 0.63 0.49 25 3.25 80.12 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.84 Yes 50 87.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 126455917 - NM_212554 METTL10 1 7.12 4.68 71 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -17 0.52 No 53 76.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 126476302 - NM_212554 METTL10 1 3.02 1.11 43 11.37 100 33 6.41 Yes 17 0.99 Yes 0 0 No -29 0.38 No 41 69.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 171751730 + NM_015935 METTL13 1 0.15 0.18 10 5.6 84.17 24 6.48 Yes 11 0.09 No 0 0 No -23 0.9 Yes 47 76.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 171759077 + NM_015935 METTL13 1 0.14 0.17 12 5.8 78.26 43 7.41 Yes 60 0.7 No 0 0 No -36 0.45 No 34 70.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 171759139 + NM_015935 METTL13 1 0.42 0.63 28 7.6 87.05 37 6.08 Yes 10 -2.55 No 0 0 No -22 0.57 No 48 56.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 171764150 + NM_015935 METTL13 1 0.14 0.14 10 7.73 86.87 26 7.55 Yes 13 1.41 Yes 0 0 No -25 0.94 Yes 45 95.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 171764569 + NM_015935 METTL13 1 0.13 0.17 11 9.53 83.87 33 5.12 No 69 0.17 No 0 0 No -25 0.86 Yes 45 86.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 119607704 + NM_020961 METTL14 1 0.22 0.18 12 4.17 69.17 44 5.24 No 19 1.1 Yes 31 0.81 Yes -31 0.51 No 39 63.45 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 119615239 + NM_020961 METTL14 1 0.38 0.26 15 9.23 86.44 23 5.36 No 31 0.19 No 0 0 No -25 0.36 No 47 41.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 119622358 + NM_020961 METTL14 1 0.17 0.13 8 2.49 83 38 6.24 Yes 50 0.54 No 0 0 No -37 0.73 Yes 33 81.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 119622363 + NM_020961 METTL14 1 0.25 0.18 9 -0.32 0 43 6.63 Yes 55 0.53 No 0 0 No -42 0.8 Yes 28 85.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 119623097 + NM_020961 METTL14 1 0.22 0.17 11 6.18 77.19 31 5.37 No 43 1.21 Yes 0 0 No -30 0.56 No 40 81.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 119624040 + NM_020961 METTL14 1 0.29 0.26 11 9.81 99.43 31 6.97 Yes 33 0.68 No 0 0 No -30 0.68 Yes 40 74.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 119626932 + NM_020961 METTL14 1 0.12 0.11 7 3.66 85.02 24 4.77 No 7 0.34 No 0 0 No -24 0.47 No 47 59.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 119627580 + NM_020961 METTL14 1 0.44 0.39 19 9.05 76.45 33 5.27 No 31 0.45 No 0 0 No -33 0.76 Yes 37 71.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 28138337 + NM_001297775 METTL15 1 0.29 0.1 7 6.11 80.71 49 5.07 No -2 0.46 No 0 0 No -33 0.63 No 37 82.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 28143688 + NM_001297775 METTL15 1 1.67 0.46 25 6.58 89.13 24 4.32 No 37 1.49 Yes 23 0.42 Yes -23 0.67 Yes 47 73.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 28145408 + NM_001297775 METTL15 1 1.63 0.4 20 2.71 77.28 41 7.26 Yes 28 0.8 Yes 24 0.78 Yes -22 0.67 Yes 30 46.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 28147056 + NM_001297775 METTL15 1 0.57 0.17 12 9.71 93.23 29 7.4 Yes 16 1.24 Yes 28 0.78 Yes -28 0.82 Yes 42 73.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 28156092 + NM_001297775 METTL15 1 1.27 0.38 22 8.94 85.38 24 6.24 Yes 11 2.43 Yes 0 0 No -23 0.91 Yes 47 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 28233783 + NM_001297775 METTL15 1 1.02 0.32 14 2.12 80.88 17 4.8 No 38 1.39 Yes 0 0 No -21 0.59 No 47 54.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 28249541 + NM_001297775 METTL15 1 3.38 1.14 47 7.69 91.79 23 5.2 No 69 0.9 Yes 0 0 No -17 0.35 No 53 35.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 28250417 + NM_001297775 METTL15 1 4.7 1.49 53 7.69 85.32 31 5.14 No 6 1 Yes 0 0 No -30 0.78 Yes 40 96.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 28318299 + NM_001297775 METTL15 1 7.85 1.06 44 8.37 83.61 22 4.86 No 72 1.71 Yes 21 0.85 Yes -21 0.76 Yes 49 92.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 28318299 + NM_001297775 METTL15 1 361.58 46.33 72 8.37 83.61 22 4.86 No 72 1.71 Yes 21 0.85 Yes -21 0.76 Yes 49 92.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 28324119 + NM_001297775 METTL15 1 0.47 0.24 13 0.22 62.13 37 6.16 Yes 24 1.87 Yes 0 0 No -36 0.88 Yes 34 96.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 28338303 + NM_001297775 METTL15 1 0.35 0.17 11 7.99 79.54 45 5.61 Yes 28 0.27 No 0 0 No -40 0.46 No 30 69.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 28349641 + NM_001297775 METTL15 1 10.07 4.94 71 6.98 76.02 68 5.68 Yes 39 0.57 No 32 0.43 Yes -30 0.63 No 40 73.93 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 2340135 - NM_024086 METTL16 1 0.15 0.17 10 8.11 86.03 23 5.2 No 10 0.75 No 22 0.95 Yes -22 0.94 Yes 48 97.87 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 2358909 - NM_024086 METTL16 1 0.17 0.15 7 8.1 93.46 24 4.84 No 69 1.28 Yes 0 0 No -23 0.85 Yes 47 68.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 2363268 - NM_024086 METTL16 1 0.72 0.63 27 6.49 90.92 29 5.39 No 16 0.46 No 28 0.81 Yes -28 0.83 Yes 42 87.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 2366487 - NM_024086 METTL16 1 0.28 0.28 14 9.17 84.89 24 5.72 Yes 11 0.45 No 0 0 No -22 0.35 No 48 54.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 2370459 - NM_024086 METTL16 1 2.36 2.71 63 10.8 90.06 29 5.83 Yes 16 0.17 No 0 0 No -28 0.78 Yes 42 70.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 2371189 - NM_024086 METTL16 1 0.14 0.14 9 1.67 0 15 4 No 69 -5.43 No 22 0.9 Yes -21 0.62 No 49 69.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 2373121 - NM_024086 METTL16 1 0.12 0.11 7 7.44 90.97 30 6.04 Yes 13 0.46 No 0 0 No -25 0.65 No 45 69.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 2378594 - NM_024086 METTL16 1 0.21 0.26 14 10.71 86.48 49 5.84 Yes 0 1.59 Yes 27 0.85 Yes -27 0.57 No 46 70.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 21460250 + NM_001029991 METTL17 1 18.02 28.24 72 10.81 83.37 18 4.9 No 5 1.12 Yes 22 0.66 Yes -17 0.64 No 48 69.41 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 8717709 + NR_134608 METTL22 1 0.87 0.19 11 7.64 84.12 15 4.78 No 2 1.4 Yes 24 0.84 Yes -20 0.92 Yes 50 93.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 8722756 + NR_134608 METTL22 1 1.86 0.24 16 8.99 95.64 21 4.83 No 8 0.84 Yes 20 0.91 Yes -20 0.81 Yes 50 78.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 8728895 + NR_134608 METTL22 1 258.65 12.72 72 8.01 87.24 37 6.4 Yes 24 0.14 No 27 0.31 Yes -36 0.9 Yes 34 95.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 8733219 + NR_134608 METTL22 1 3.01 0.64 31 6.54 84.2 17 5.71 Yes 4 0.99 Yes 0 0 No -33 0.48 No 37 50.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 82779559 + NR_144943 METTL25 1 1.43 0.11 8 7.32 77.91 47 4.33 No 12 0.26 No 0 0 No -30 0.44 No 40 44.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 82782415 + NR_144943 METTL25 1 0.45 0.18 11 2.7 77.57 18 4.47 No 69 0.28 No 0 0 No -21 0.92 Yes 49 87.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 82782580 + NR_144943 METTL25 1 1.06 0.49 27 6.18 85.22 22 5 No 9 0.47 No 21 0.92 Yes -21 0.84 Yes 49 73.84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 82793281 + NR_144943 METTL25 1 0.62 0.26 16 5.2 78.7 37 6.54 Yes 24 0.25 No 0 0 No -23 0.77 Yes 47 73.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 82801595 + NR_144943 METTL25 1 3.52 1.21 45 4.91 82.04 29 4.92 No 50 -4.53 No 0 0 No -28 0.6 No 42 67.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 82872714 + NR_144943 METTL25 1 1.65 0.36 16 -4.19 0 57 9.63 Yes 44 1.2 Yes 0 0 No -24 0.62 No 39 27.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 684661 - NR_109978 METTL26 1 0.29 0.65 30 0.38 73.5 16 4.69 No 3 -0.14 No 18 0.61 Yes -15 0.45 No 55 52.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 684895 - NR_109978 METTL26 1 8.79 1.18 47 2.96 69.51 14 4.53 No -4 0.69 No 0 0 No -13 0.56 No 45 30.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 684924 - NR_109978 METTL26 1 2.96 0.44 21 2.27 0 22 3.98 No 9 -0.66 No 0 0 No -21 0.69 Yes 46 51.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 684936 - NR_109978 METTL26 1 4.7 0.63 30 0.38 58.49 26 5.47 No -3 -0.98 No 0 0 No -25 0.59 No 45 60.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 684957 - NR_109978 METTL26 1 431 60.65 72 9.12 76.99 27 5.74 Yes NA NA NA 26 0.79 Yes -26 0.82 Yes 44 77.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 684957 - NR_109978 METTL26 1 14.85 2.08 64 9.12 76.99 27 5.74 Yes NA NA NA 26 0.79 Yes -26 0.82 Yes 44 77.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 684957 - NR_109978 METTL26 1 2.14 0.32 16 9.12 76.99 27 5.74 Yes NA NA NA 26 0.79 Yes -26 0.82 Yes 44 77.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 684981 - NR_109978 METTL26 1 4.63 0.65 34 3.1 72.56 13 6.36 Yes 54 -2.66 No 26 0.79 Yes -22 0.25 No 48 22.63 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 685013 - NR_109978 METTL26 1 7.37 1.07 47 -0.9 0 13 4.36 No 57 1.94 Yes 0 0 No -20 0.46 No 51 61.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 685822 - NR_109978 METTL26 1 0.19 0.18 12 -2.74 55.81 27 5.74 Yes 37 0.93 Yes 0 0 No -26 0.77 Yes 60 42.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 685857 - NR_109978 METTL26 1 0.19 0.18 12 4.02 72.18 15 6.57 Yes 2 0.89 Yes 0 0 No -37 0.69 Yes 33 73.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 60518101 + NM_181725 METTL2A 1 0.57 0.28 12 9.11 91.66 31 5.71 Yes 4 0.96 Yes 0 0 No -25 0.53 No 45 52.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 60505549 + NM_181725 METTL2A 1 0.44 0.14 7 8.26 83.72 29 5.38 No 16 1 Yes 0 0 No -28 0.83 Yes 42 91.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 60525937 + NM_181725 METTL2A 1 3.68 4.38 67 -1.44 79.84 27 6.99 Yes 14 0.37 No 0 0 No -29 0.66 No 41 76.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 128118002 + NM_018396 METTL2B 1 0.13 0.1 7 7.5 83.82 28 6.16 Yes 6 0.01 No 27 0.67 Yes -27 0.87 Yes 43 80.2 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 128121101 + NM_018396 METTL2B 1 0.22 0.18 13 8.58 83.72 29 5.38 No 16 1.35 Yes 0 0 No -28 0.89 Yes 42 95.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128123080 + NM_018396 METTL2B 1 1.54 1.13 47 8 84.13 36 7.25 Yes 23 0.46 No 24 0.52 Yes -35 0.62 No 35 67.97 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 128128376 + NM_018396 METTL2B 1 8.84 2.94 59 8.28 92.03 29 4.69 No 13 0.75 No 25 0.86 Yes -28 0.63 No 42 54.48 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 128139426 + NM_018396 METTL2B 1 1.35 0.75 33 10.03 95.2 20 4.9 No 7 0.12 No 0 0 No -17 0.66 Yes 53 86.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 128141817 + NM_018396 METTL2B 1 3.01 2.28 57 -1.44 79.84 27 6.78 Yes 14 0.37 No 0 0 No -29 0.65 No 41 67.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 21966550 - NM_019852 METTL3 1 1.71 2.24 57 6.16 89.72 58 6.36 Yes 4 0.72 No 23 0.24 Yes -25 0.89 Yes 45 85.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 21968710 - NM_019852 METTL3 1 0.21 0.14 10 4.81 71.63 49 8.08 Yes 36 0.47 No 0 0 No -30 0.94 Yes 40 90.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 21969967 - NM_019852 METTL3 1 1.89 1.94 58 0.4 82.98 19 6.45 Yes 6 0.08 No 25 0.74 Yes -25 0.53 No 45 58.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 21971717 - NM_019852 METTL3 1 0.68 0.92 41 6.05 0 33 5.24 No 67 0.87 Yes 0 0 No -32 0.85 Yes 38 95.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 21976378 - NM_019852 METTL3 1 1.44 1.07 44 4.91 87.46 28 5.38 No 44 0.76 No 27 0.82 Yes -27 0.59 No 43 67.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 21979120 - NM_019852 METTL3 1 0.3 0.24 12 3.28 79.8 40 6.71 Yes 57 0.69 No 0 0 No -28 0.82 Yes 42 87.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 21979123 - NM_019852 METTL3 1 3.06 2.07 63 7.13 83.94 37 6.48 Yes 54 0.69 No 25 0.54 Yes -25 0.82 Yes 45 88.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 2540861 - NM_022840 METTL4 1 3.13 0.75 31 5.29 72.1 26 5.2 No 13 0.07 No 0 0 No -25 0.8 Yes 45 80.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2549987 - NM_022840 METTL4 1 2.14 0.54 27 2.26 0 37 4.45 No 45 1.5 Yes 0 0 No -36 0.54 No 34 58.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 2549991 - NM_022840 METTL4 1 0.51 0.11 8 0.51 83.28 33 4.32 No 41 1.51 Yes 0 0 No -32 0.58 No 38 61.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 2552188 - NM_022840 METTL4 1 0.87 0.25 15 2.04 83.78 54 6.36 Yes 41 1.23 Yes 0 0 No -28 0.89 Yes 42 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 2552760 - NM_022840 METTL4 1 0.29 0.1 7 3.48 0 26 6.63 Yes 13 0.67 No 0 0 No -25 0.77 Yes 45 62.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 2554951 - NM_022840 METTL4 1 0.82 0.21 13 4.46 82.5 37 6.32 Yes 24 0.18 No 0 0 No -36 0.91 Yes 34 93.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2554951 - NM_022840 METTL4 1 1.15 0.24 13 4.46 82.5 37 6.32 Yes 24 0.18 No 0 0 No -36 0.91 Yes 34 93.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2562365 - NM_022840 METTL4 1 9.39 2.14 63 3.16 0 26 6.73 Yes 13 1.15 Yes 0 0 No -25 0.61 No 44 56.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 170669035 - NM_001293187 METTL5 1 1.4 4.32 70 7.56 82.58 30 6.71 Yes 65 1.2 Yes 29 0.56 Yes -29 0.67 Yes 41 61.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 170669035 - NM_001293187 METTL5 1 0.04 0.14 10 7.56 82.58 30 6.71 Yes 65 1.2 Yes 29 0.56 Yes -29 0.67 Yes 41 61.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 170677664 - NM_001293187 METTL5 1 1.06 2.85 67 8.62 86.49 38 7.24 Yes 10 0.86 Yes 0 0 No -28 0.47 No 33 45.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 170678830 - NM_001293187 METTL5 1 0.04 0.13 7 8.55 90.63 32 6.23 Yes 19 1.49 Yes 0 0 No -31 0.79 Yes 39 87.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 170681163 - NM_001293187 METTL5 1 0.48 0.36 20 -3.44 0 18 4.12 No 72 -5.85 No 22 0.25 Yes -18 0.16 No 14 24.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 15455670 - NM_001301791 METTL6 1 56.15 5.88 71 8.95 88.87 27 5.16 No 53 1.1 Yes 20 0.81 Yes -26 0.63 No 44 86.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 15455670 - NM_001301791 METTL6 1 396.9 41.9 72 8.95 88.87 27 5.16 No 53 1.1 Yes 20 0.81 Yes -26 0.63 No 44 86.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 15455670 - NM_001301791 METTL6 1 5.6 0.67 27 8.95 88.87 27 5.16 No 53 1.1 Yes 20 0.81 Yes -26 0.63 No 44 86.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 15455688 - NM_001301791 METTL6 1 1.95 0.21 14 -2.24 0 14 4.32 No 35 1.09 Yes 20 0.81 Yes -43 0.63 No 27 59.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 15456422 - NM_001301791 METTL6 1 13.09 1.33 49 1.78 0 28 7.73 Yes 15 2.11 Yes 27 0.96 Yes -27 0.85 Yes 43 94.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 15456422 - NM_001301791 METTL6 1 4.26 0.5 25 1.78 0 28 7.73 Yes 15 2.11 Yes 27 0.96 Yes -27 0.85 Yes 43 94.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 15457165 - NM_001301791 METTL6 1 1.06 0.29 18 8.19 82.12 25 5.2 No 48 1.21 Yes 0 0 No -24 0.94 Yes 46 95.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15458951 - NM_001301791 METTL6 1 0.79 0.39 23 0.6 0 34 4.2 No 39 0.87 Yes 0 0 No -37 0.39 No 33 43.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 15461306 - NM_001301791 METTL6 1 0.2 0.11 8 9.12 73.68 33 4.8 No 40 0.86 Yes 0 0 No -37 0.78 Yes 33 92.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15462858 - NM_001301791 METTL6 1 0.61 0.29 15 9.89 86.91 15 4.84 No 2 1.03 Yes 0 0 No -22 0.83 Yes 48 91.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172181625 - NM_001321156 METTL8 1 0.2 0.32 17 3.01 0 35 6.77 Yes 22 1.5 Yes 0 0 No -34 0.61 No 36 75.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 172184716 - NM_001321156 METTL8 1 0.45 0.57 29 10.21 84.84 43 6.13 Yes 30 0.26 No 0 0 No -37 0.52 No 33 77.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 172187127 - NM_001321156 METTL8 1 2.65 2.86 63 10.39 88.47 25 5.19 No 5 1.27 Yes 27 0.82 Yes -27 0.53 No 43 56.31 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 172195951 - NM_001321156 METTL8 1 0.17 0.24 12 6.92 78.22 13 5.3 No 0 0.81 Yes 0 0 No -25 0.75 Yes 45 69.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172199922 - NM_001321156 METTL8 1 0.07 0.11 7 4.32 87.32 28 4.93 No 71 1.14 Yes 0 0 No -27 0.64 No 39 71.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 172199947 - NM_001321156 METTL8 1 0.16 0.22 12 -3.64 77.41 59 10.2 Yes 46 1.14 Yes 0 0 No -22 0.53 No 35 29.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 172239918 - NM_001321156 METTL8 1 0.17 0.17 10 7.96 87.91 37 6.56 Yes 58 -0.67 No 0 0 No -31 0.39 No 39 64.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 21625574 + NM_016025 METTL9 1 0.14 0.26 18 5.3 80.15 71 8.8 Yes 58 1.75 Yes 0 0 No -27 0.68 Yes 43 51.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 44105572 - NM_005926 MFAP1 1 0.07 0.15 9 1.84 72.64 22 5.29 No 9 -1.06 No 20 0.93 Yes -21 0.73 Yes 49 62.27 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 153431296 + NM_001242336 MFAP3 1 1.73 0.81 35 4.75 77.72 30 5.73 Yes 52 0.64 No 29 0.74 Yes -29 0.65 No 41 85.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr5 153431377 + NM_001242336 MFAP3 1 0.7 0.31 18 2.03 67.56 27 4.8 No -1 0.08 No 0 0 No -30 0.75 Yes 40 77.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 228195341 + NM_001277067 MFF 1 2866.09 116.83 72 11.63 96.17 36 5.74 Yes 31 0.77 Yes 29 0.68 Yes -35 0.75 Yes 35 74.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 228195350 + NM_001277067 MFF 1 3.11 0.14 10 -5.4 0 14 4.24 No 40 0.75 No 0 0 No -44 0.82 Yes 26 84.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 228195341 + NM_001277067 MFF 1 276.38 11.13 72 11.63 96.17 36 5.74 Yes 31 0.77 Yes 29 0.68 Yes -35 0.75 Yes 35 74.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 228197162 + NM_001277067 MFF 1 0.04 0.13 8 3.33 81.48 23 4.83 No 10 0.3 No 0 0 No -22 0.66 No 48 81.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 228207460 + NM_001277067 MFF 1 84.55 52.39 72 2.81 77.08 14 4.44 No 65 0.37 No 24 0.74 Yes -24 0.68 Yes 46 53.19 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 228212058 + NM_001277067 MFF 1 2.51 1.53 59 5 86.05 21 4.8 No 40 1.42 Yes 0 0 No -20 0.83 Yes 50 84.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 228217229 + NM_001277067 MFF 1 310.09 31.36 72 1.62 60.61 91 10.3 Yes 27 1.52 Yes 39 0.65 Yes -39 0.47 No 31 81.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 228215651 + NM_001277067 MFF 1 8.82 1.06 43 4.09 72.47 34 6.9 Yes 21 1.12 Yes 0 0 No -33 0.74 Yes 37 73.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 228217229 + NM_001277067 MFF 1 646.32 67.68 72 1.62 60.61 91 10.3 Yes 27 1.52 Yes 39 0.65 Yes -39 0.47 No 31 81.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 89443990 - NM_001310321 MFGE8 1 1.2 0.22 14 7.34 65.83 28 5.66 Yes 15 0.79 Yes 0 0 No -27 0.91 Yes 43 94.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89445463 - NM_001310321 MFGE8 1 0.64 0.11 7 8.86 93.9 38 6.22 Yes 36 1.27 Yes 0 0 No -37 0.79 Yes 33 80.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89447394 - NM_001310321 MFGE8 1 0.48 0.18 10 5.68 73.64 32 4.7 No 19 0.73 No 23 0.87 Yes -23 0.84 Yes 47 79.84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 89448174 - NM_001310321 MFGE8 1 0.39 0.1 7 11.57 88.61 29 5.92 Yes 31 0.8 Yes 42 0.16 Yes -28 0.8 Yes 42 90.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 8647945 - NM_004225 MFHAS1 1 7.96 5.82 72 11.15 79.95 29 6.71 Yes 16 0.8 Yes 28 0.71 Yes -28 0.89 Yes 42 88.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 8651531 - NM_004225 MFHAS1 1 0.25 0.21 10 6.42 80.64 22 5.74 Yes 9 1.09 Yes 0 0 No -21 0.77 Yes 49 86.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 8681461 - NM_004225 MFHAS1 1 0.23 0.17 9 11.84 89.3 27 7.82 Yes 35 0.55 No 0 0 No -29 0.47 No 41 56.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 8740119 - NM_004225 MFHAS1 1 0.99 0.71 38 2 83 32 5.9 Yes 19 1.23 Yes 0 0 No -31 0.7 Yes 39 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179066601 + NM_033540 MFN1 1 0.11 0.19 11 6.45 71.45 31 5.77 Yes 59 0.34 No 33 0.44 Yes -30 0.92 Yes 40 93.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 179066635 + NM_033540 MFN1 1 10.97 17.81 72 5.02 75.82 21 6.56 Yes 8 1.88 Yes 0 0 No -20 0.74 Yes 50 76.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179069319 + NM_033540 MFN1 1 0.12 0.29 19 8.13 90.64 16 6.48 Yes 3 1.18 Yes 0 0 No -22 0.82 Yes 48 71.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179076633 + NM_033540 MFN1 1 0.08 0.13 8 -7.61 0 9 3.87 No 52 0.36 No 0 0 No -47 0.78 Yes 23 65.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 179076928 + NM_033540 MFN1 1 1.91 3.85 68 9.58 87.82 23 6.23 Yes 10 1.17 Yes 0 0 No -22 0.52 No 48 71.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 179080149 + NM_033540 MFN1 1 0.33 0.75 36 3.74 0 31 6.48 Yes 40 0.35 No 0 0 No -41 0.7 Yes 40 77.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 179086003 + NM_033540 MFN1 1 0.08 0.19 9 6.08 75.15 52 7.55 Yes 6 1.42 Yes 0 0 No -19 0.34 No 32 43.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 179092921 + NM_033540 MFN1 1 0.14 0.25 14 3.4 71.85 37 7.54 Yes 24 1.25 Yes 0 0 No -36 0.92 Yes 34 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179093407 + NM_033540 MFN1 1 0.06 0.11 8 3.22 68.69 40 6.77 Yes 50 0.84 Yes 0 0 No -33 0.54 No 31 78.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 12041866 + NM_014874 MFN2 1 7.09 5.07 70 12.79 97.05 25 6.55 Yes 58 -1.51 No 24 0.7 Yes -24 0.79 Yes 46 85.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 12042030 + NM_014874 MFN2 1 11.88 8.29 71 0.29 0 29 7.75 Yes 66 0.21 No 27 0.83 Yes -28 0.76 Yes 42 93.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 12042123 + NM_014874 MFN2 1 0.48 0.35 18 4.9 85.03 28 5.83 Yes 15 0.2 No 0 0 No -27 0.92 Yes 43 90.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12042562 + NM_014874 MFN2 1 0.04 0.1 7 7.55 86.08 34 7.71 Yes 54 0.75 No 19 0.81 Yes -33 0.71 Yes 37 68.9 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 12042579 + NM_014874 MFN2 1 2.57 5.72 72 8.79 86.28 20 5.04 No 7 1.23 Yes 19 0.81 Yes -19 0.92 Yes 51 95.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 12048483 + NM_014874 MFN2 1 0.05 0.11 8 8.36 86.43 42 7.4 Yes 73 0.97 Yes 0 0 No -34 0.38 No 33 63.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 12052335 + NM_014874 MFN2 1 0.84 1.82 58 7.06 82.47 29 5.53 No 39 1.05 Yes 28 0.55 Yes -28 0.44 No 46 62.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 12061840 + NM_014874 MFN2 1 0.17 0.22 14 1.75 73.92 18 4.9 No 59 0.37 No 0 0 No -35 0.91 Yes 35 91.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12063814 + NM_014874 MFN2 1 1.64 3.18 67 4.98 65.76 32 5.66 Yes 38 0.64 No 0 0 No -31 0.95 Yes 39 93.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12063856 + NM_014874 MFN2 1 0.16 0.29 20 2.06 60.6 46 6.78 Yes 1 0.8 Yes 0 0 No -46 0.42 No 25 64.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 37865351 - NR_029413 MFNG 1 0.48 0.9 41 6.47 84.36 26 4.78 No 10 0.99 Yes 25 0.83 Yes -25 0.72 Yes 45 81.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 37870934 - NR_029413 MFNG 1 0.96 1.65 55 6.74 72.76 34 5.35 No 21 0.87 Yes 0 0 No -33 0.59 No 37 56.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 37874621 - NR_029413 MFNG 1 0.17 0.25 16 7.67 86.08 53 7.22 Yes 54 0.73 No 0 0 No -33 0.54 No 37 77.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 158522111 + NM_022736 MFSD1 1 3.56 2.71 68 4.12 0 28 5.08 No 12 0.09 No 23 0.95 Yes -27 0.95 Yes 43 97.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 158542966 + NM_022736 MFSD1 1 0.65 0.69 29 7.44 84.64 46 7.91 Yes 33 0.39 No 24 0.7 Yes -24 0.73 Yes 46 71.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 158545045 + NM_022736 MFSD1 1 0.2 0.21 10 -1.74 62.96 35 7.47 Yes 22 0.16 No 28 0.34 Yes -24 0.86 Yes 46 88.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 158545248 + NM_022736 MFSD1 1 0.12 0.14 9 6.14 89.67 43 6.93 Yes 30 0.7 No 0 0 No -42 0.6 No 28 79.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 2932604 - NM_001146069 MFSD10 1 1.02 1.01 41 12.14 90.09 46 7.94 Yes 33 0.39 No 0 0 No -45 0.47 No 25 73.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 2933384 - NM_001146069 MFSD10 1 0.23 0.26 12 0.8 0 10 4 No 11 1.92 Yes 0 0 No -23 0.82 Yes 47 90.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2933474 - NM_001146069 MFSD10 1 0.07 0.1 7 4.05 82.02 15 4.12 No 24 1.38 Yes 0 0 No -23 0.91 Yes 47 80.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2934101 - NM_001146069 MFSD10 1 0.15 0.15 10 8.18 85.47 20 6.3 Yes 7 0.8 Yes 0 0 No -30 0.86 Yes 40 70.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2934101 - NM_001146069 MFSD10 1 0.16 0.15 10 8.18 85.47 20 6.3 Yes 7 0.8 Yes 0 0 No -30 0.86 Yes 40 70.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2934137 - NM_001146069 MFSD10 1 8.46 9.38 72 8.74 83.22 41 5.1 No 68 1.17 Yes 26 0.71 Yes -26 0.55 No 44 56.38 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 2934418 - NM_001146069 MFSD10 1 3.11 2.75 64 6.44 90.9 20 5.59 Yes 39 -0.26 No 18 0.52 Yes -26 0.73 Yes 44 76.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2934461 - NM_001146069 MFSD10 1 2.96 2.38 61 4.97 76 14 5.61 Yes 69 1.27 Yes 18 0.52 Yes -25 0.42 No 45 23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 2934523 - NM_001146069 MFSD10 1 0.67 0.61 32 0.52 71.85 20 5.09 No 7 1.25 Yes 40 0.44 Yes -19 0.6 No 51 70.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 2934630 - NM_001146069 MFSD10 1 0.28 0.24 14 7.9 78.59 24 5.09 No 71 -0.87 No 0 0 No -23 0.92 Yes 47 90.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 2934905 - NM_001146069 MFSD10 1 3.78 3.85 67 7.9 86.76 28 6.33 Yes 35 1.34 Yes 27 0.96 Yes -27 0.97 Yes 43 97.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 74738010 + NM_001242532 MFSD11 1 0.77 0.36 19 8.43 89.05 19 5.66 Yes 6 0.29 No 30 0.87 Yes -26 0.4 No 52 44.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 74738075 + NM_001242532 MFSD11 1 1.92 0.89 37 5.15 86.58 28 4.59 No 29 1.13 Yes 27 0.79 Yes -27 0.72 Yes 43 64.11 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 74739239 + NM_001242532 MFSD11 1 0.43 0.13 7 4.54 86.4 20 4.29 No 7 0.38 No 0 0 No -25 0.82 Yes 45 87.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 74740656 + NM_001242532 MFSD11 1 2.57 1.03 43 4.96 0 21 4.58 No 12 1.42 Yes 0 0 No -20 0.87 Yes 50 72.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74772492 + NM_001242532 MFSD11 1 1.72 0.63 30 -2.59 0 28 5.4 No 15 0.74 No 0 0 No -33 0.75 Yes 37 79.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 74774301 + NM_001242532 MFSD11 1 0.57 0.21 13 7.09 88.51 25 5.29 No 41 0.81 Yes 0 0 No -53 0.36 No 49 67.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 3544933 - NM_001287529 MFSD12 1 0.4 0.43 23 0.47 0 27 8.54 Yes 14 1.25 Yes 0 0 No -26 0.95 Yes 44 92.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3547520 - NM_001287529 MFSD12 1 0.11 0.13 7 3.11 75.98 31 5.91 Yes 48 2.24 Yes 0 0 No -30 0.54 No 19 28.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 104229348 + NM_024789 MFSD13A 1 2.42 0.21 14 9.38 95.46 16 4.85 No 49 0.64 No 27 0.81 Yes -27 0.63 No 43 61.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 104231778 + NM_024789 MFSD13A 1 4.65 0.51 24 -0.86 72.65 20 4.54 No 19 1.35 Yes 19 0.83 Yes -19 0.49 No 39 40.22 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 100508628 + NM_033055 MFSD14A 1 4.02 6.61 71 7.92 0 21 4.58 No 74 0.73 No 0 0 No -20 0.9 Yes 50 83.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100516012 + NM_033055 MFSD14A 1 0.08 0.19 13 6.65 82.95 22 5.6 Yes 24 -3.63 No 0 0 No -26 0.58 No 44 68.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100532993 + NM_033055 MFSD14A 1 0.06 0.13 7 8.47 92.83 28 6.24 Yes 15 1.32 Yes 0 0 No -27 0.88 Yes 43 94.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100546063 + NM_033055 MFSD14A 1 0.25 0.39 21 -0.15 0 19 4.58 No 26 0.59 No 0 0 No -38 0.52 No 32 70.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 97193313 + NM_032558 MFSD14B 1 0.61 0.53 28 3.71 72.4 28 8.29 Yes 71 1.17 Yes 0 0 No -27 0.69 Yes 43 83.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 97203337 + NM_032558 MFSD14B 1 0.5 0.65 37 7.74 76.5 29 6.93 Yes 16 1.2 Yes 0 0 No -28 0.9 Yes 42 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 97204743 + NM_032558 MFSD14B 1 0.16 0.35 23 3.58 67.49 82 11.18 Yes 69 2.9 Yes 0 0 No -30 0.42 No 40 59.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 97211843 + NM_032558 MFSD14B 1 0.21 0.24 14 7.22 79.83 20 5.45 No 7 0.88 Yes 0 0 No -19 0.4 No 51 69.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 97219860 + NM_032558 MFSD14B 1 0.15 0.25 15 6.01 80.73 24 5.09 No 11 1.06 Yes 0 0 No -23 0.46 No 51 77.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 99725246 - NR_002894 MFSD14C 1 2.56 1.49 54 6.46 81.59 27 5.67 Yes 17 1.43 Yes 0 0 No -29 0.91 Yes 41 86.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 99768417 - NR_002894 MFSD14C 1 0.52 0.14 8 9.33 84.17 30 6 Yes 73 1.21 Yes 0 0 No -32 0.61 No 40 69.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 40422762 + NM_001136493 MFSD2A 1 1.16 0.39 20 -0.26 0 26 7 Yes 13 0.66 No 0 0 No -25 0.79 Yes 45 90.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 40431118 + NM_001136493 MFSD2A 1 0.28 0.22 12 3.01 68.32 24 5.2 No 11 -0.52 No 29 0.91 Yes -26 0.94 Yes 44 92.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145735750 + NM_138431 MFSD3 1 7.26 1.25 45 -6.29 0 16 3.75 No 17 1.56 Yes 0 0 No -29 0.86 Yes 41 87.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145735807 + NM_138431 MFSD3 1 0.61 0.11 8 -4.43 75.07 21 6.56 Yes 74 1.59 Yes 0 0 No -23 0.71 Yes 19 59.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 111585012 + NM_153369 MFSD4B 1 1.4 0.5 28 4.65 84.5 26 9.62 Yes 13 0.63 No 24 0.82 Yes -25 0.68 Yes 50 76.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 111587383 + NM_153369 MFSD4B 1 0.44 0.15 8 7.41 80.65 25 5.85 Yes 32 1.11 Yes 0 0 No -34 0.9 Yes 36 90.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53646650 + NM_032889 MFSD5 1 0.45 0.13 8 10.3 86.74 23 7.62 Yes 57 2.2 Yes 0 0 No -22 0.75 Yes 48 89.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 191298052 + NM_017694 MFSD6 1 5.32 0.72 31 10.55 95.65 16 4.62 No 56 -2.79 No 25 0.69 Yes -25 0.91 Yes 45 89.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 191348631 + NM_017694 MFSD6 1 0.18 0.14 7 6.62 80.38 33 6.46 Yes 11 0.49 No 0 0 No -23 0.73 Yes 47 80.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 128842354 - NM_152778 MFSD8 1 1.44 0.26 15 8.08 87.98 29 5.35 No 16 0.99 Yes 0 0 No -22 0.85 Yes 48 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128853097 - NM_152778 MFSD8 1 0.5 0.19 11 7 86.16 22 5.74 Yes 71 1.49 Yes 0 0 No -26 0.71 Yes 44 83.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128859992 - NM_152778 MFSD8 1 2.75 0.82 36 -3.54 81.65 35 6.17 Yes 30 0.38 No 0 0 No -26 0.74 Yes 44 56.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 128859992 - NM_152778 MFSD8 1 1.68 0.49 25 -3.54 81.65 35 6.17 Yes 30 0.38 No 0 0 No -26 0.74 Yes 44 56.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 128874022 - NM_152778 MFSD8 1 0.34 0.13 9 6.4 88.76 34 5.91 Yes 21 0.98 Yes 0 0 No -33 0.78 Yes 37 80.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128877652 - NM_152778 MFSD8 1 0.56 0.18 11 7.37 85.05 40 5.44 No 17 0.7 No 0 0 No -29 0.93 Yes 41 91.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 128878746 - NM_152778 MFSD8 1 2.59 0.71 31 -1.11 77.3 36 4.43 No 31 0.07 No 28 0.64 Yes -30 0.62 No 40 77.75 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 103340338 - NM_001322080 MFSD9 1 29.79 4.89 71 8.34 80.3 23 6.28 Yes 31 1.09 Yes 22 0.57 Yes -22 0.62 No 48 47.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 103340338 - NM_001322080 MFSD9 1 0.95 0.14 8 8.34 80.3 23 6.28 Yes 31 1.09 Yes 22 0.57 Yes -22 0.62 No 48 47.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 103348598 - NM_001322080 MFSD9 1 18.19 3.07 70 7.69 86.44 34 5.38 No 29 -1.75 No 23 0.51 Yes -23 0.69 Yes 44 76.39 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41961588 + NM_001164273 MGA 1 1.09 0.28 15 7.92 89.95 22 4.9 No 39 1.23 Yes 0 0 No -21 0.94 Yes 49 95.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42000326 + NM_001164273 MGA 1 1.21 0.35 22 9.17 86.74 30 5.83 Yes 29 1.08 Yes 0 0 No -29 0.63 No 20 52.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 42022752 + NM_001164273 MGA 1 0.3 0.18 9 3.18 76.49 26 7.47 Yes 66 -5.95 No 0 0 No -26 0.66 Yes 45 77.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42025692 + NM_001164273 MGA 1 0.36 0.21 13 7.26 81.37 32 6.07 Yes 40 0.95 Yes 0 0 No -24 0.76 Yes 46 84.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42032103 + NM_001164273 MGA 1 143.77 23.28 72 9.76 85.34 30 5.83 Yes 68 -2.26 No 29 0.82 Yes -29 0.91 Yes 41 96.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 42032194 + NM_001164273 MGA 1 0.93 0.17 10 3.47 88.26 25 4.9 No 51 0.69 No 0 0 No -24 0.56 No 53 51.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42032234 + NM_001164273 MGA 1 4.35 0.65 30 5.39 80.31 25 5.46 No 12 0.68 No 25 0.84 Yes -24 0.68 Yes 46 76.9 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 42032254 + NM_001164273 MGA 1 19.51 2.94 67 -0.73 0 30 4.58 No 32 0.66 No 0 0 No -29 0.72 Yes 48 41.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 42035253 + NM_001164273 MGA 1 2.63 1.15 52 5.05 73.54 38 7.91 Yes 25 1.82 Yes 0 0 No -44 0.53 No 26 70.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 180222876 - NM_001114617 MGAT1 1 5.32 2.13 62 8.54 87.99 29 7.94 Yes 16 1.41 Yes 28 0.89 Yes -28 0.97 Yes 42 97.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179225454 - NM_014275 MGAT4B 1 0.31 0.38 21 2.15 72.8 32 6.06 Yes 2 1.5 Yes 21 0.89 Yes -31 0.79 Yes 39 60.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 179225577 - NM_014275 MGAT4B 1 1.65 2.03 63 6.93 87.66 19 4.9 No 23 -0.13 No 20 0.97 Yes -17 0.72 Yes 53 80.55 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179226176 - NM_014275 MGAT4B 1 0.45 0.44 28 9.04 77.86 31 6 Yes 50 1.62 Yes 30 0.76 Yes -30 0.88 Yes 40 70.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179226251 - NM_014275 MGAT4B 1 0.54 0.68 34 8.98 84.09 19 6.82 Yes 6 0.14 No 27 0.52 Yes -18 0.62 No 52 40.52 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179226251 - NM_014275 MGAT4B 1 0.14 0.17 10 8.98 84.09 19 6.82 Yes 6 0.14 No 27 0.52 Yes -18 0.62 No 52 40.52 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 179226308 - NM_014275 MGAT4B 1 1.95 2.51 63 -2.58 62.83 38 6.24 Yes 25 0.18 No 29 0.44 Yes -37 0.87 Yes 33 87.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179227097 - NM_014275 MGAT4B 1 0.18 0.24 14 4.97 80.17 85 8.39 Yes 72 -0.74 No 30 0.83 Yes -20 0.72 Yes 50 80.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179227929 - NM_014275 MGAT4B 1 0.21 0.15 9 -0.08 72.55 22 4.5 No 9 0.37 No 0 0 No -21 0.67 Yes 53 71.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 179228385 - NM_014275 MGAT4B 1 0.26 0.19 12 -0.38 70.08 27 6.4 Yes 14 2.03 Yes 26 0.72 Yes -26 0.83 Yes 44 74.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179228693 - NM_014275 MGAT4B 1 1 0.99 45 -3.8 67.21 30 5.98 Yes 17 0.98 Yes 27 0.86 Yes -29 0.96 Yes 41 94.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 179228720 - NM_014275 MGAT4B 1 0.13 0.13 8 3.98 81.45 13 4.84 No 49 -2.94 No 23 0.06 Yes -17 0.57 No 53 40.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 135095864 + NM_002410 MGAT5 1 0.3 0.22 11 5.39 83.31 14 5.24 No 65 2.04 Yes 0 0 No -23 0.61 No 47 62.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 135132666 + NM_002410 MGAT5 1 0.17 0.15 11 6.8 83.01 32 6.46 Yes 19 0.99 Yes 0 0 No -31 0.9 Yes 39 87.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 135189115 + NM_002410 MGAT5 1 0.23 0.26 12 7.54 91.88 15 5.29 No 64 0.26 No 0 0 No -21 0.8 Yes 49 60.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 97596287 - NR_002822 MGC72080 1 0.43 0.31 15 2.08 70.78 32 6 Yes 19 1.5 Yes 0 0 No -31 0.93 Yes 39 96.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 97596287 - NR_002822 MGC72080 1 0.3 0.17 11 2.08 70.78 32 6 Yes 19 1.5 Yes 0 0 No -31 0.93 Yes 39 96.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 97596564 - NR_002822 MGC72080 1 0.43 0.26 15 0.13 0 18 4.36 No 28 0.64 No 0 0 No -17 0.59 No 53 56.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 97599175 - NR_002822 MGC72080 1 0.55 0.36 20 5.13 81.1 24 6.9 Yes 38 -4.24 No 24 0.72 Yes -23 0.93 Yes 47 93.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 97599540 - NR_002822 MGC72080 1 0.22 0.14 9 8.95 87.16 25 6.44 Yes -2 0.45 No 25 0.57 Yes -24 0.32 No 46 50.1 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 97600043 - NR_002822 MGC72080 1 2.06 1.21 43 10.41 91.35 28 6.1 Yes 15 0.85 Yes 30 0.87 Yes -30 0.8 Yes 40 87.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 97601337 - NR_002822 MGC72080 1 1.74 1.07 43 6.55 80.87 22 4.9 No 9 0.71 No 0 0 No -21 0.93 Yes 49 92.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 103547203 - NM_001142434 MGEA5 1 0.33 0.82 39 4.82 76.54 21 6.63 Yes 8 1.4 Yes 0 0 No -20 0.62 No 50 72.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 103549564 - NM_001142434 MGEA5 1 0.29 0.75 36 8.2 87.64 24 5.92 Yes 11 1.8 Yes 0 0 No -23 0.89 Yes 47 93.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103550849 - NM_001142434 MGEA5 1 0.24 0.42 23 -0.28 77.58 32 5.79 Yes 38 0.79 Yes 26 0.92 Yes -23 0.9 Yes 47 93.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 103552659 - NM_001142434 MGEA5 1 1.67 3.85 65 6.84 89.67 27 6.03 Yes 58 1.69 Yes 26 0.88 Yes -26 0.93 Yes 44 88.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 103552659 - NM_001142434 MGEA5 1 0.1 0.24 13 6.84 89.67 27 6.03 Yes 58 1.69 Yes 26 0.88 Yes -26 0.93 Yes 44 88.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 103553502 - NM_001142434 MGEA5 1 1.19 2.74 66 8.19 83.61 27 5.92 Yes 14 0.18 No 26 0.62 Yes -27 0.44 No 44 57.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 103555238 - NM_001142434 MGEA5 1 1.88 4.64 69 7.02 81.14 36 6.94 Yes 23 1.52 Yes 0 0 No -35 0.88 Yes 35 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103555729 - NM_001142434 MGEA5 1 0.85 2.11 59 12.12 94.9 31 5.57 Yes 18 0.51 No 0 0 No -26 0.58 No 44 75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 103560158 - NM_001142434 MGEA5 1 6321.14 240.61 72 10.31 92.41 42 7.35 Yes 29 0.9 Yes 41 0.39 Yes -32 0.52 No 29 72.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 103560158 - NM_001142434 MGEA5 1 10.25 0.39 26 10.31 92.41 42 7.35 Yes 29 0.9 Yes 41 0.39 Yes -32 0.52 No 29 72.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 103560167 - NM_001142434 MGEA5 1 10.42 0.44 29 1.07 0 33 6.8 Yes 20 0.85 Yes 41 0.39 Yes -32 0.48 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 103563204 - NM_001142434 MGEA5 1 81.92 3.07 66 9.75 85.86 33 6.24 Yes 33 1.94 Yes 0 0 No -32 0.89 Yes 38 94.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103563768 - NM_001142434 MGEA5 1 0.27 0.64 33 -3.62 0 18 4.24 No 30 0.69 No 0 0 No -33 0.81 Yes 37 72.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 103567610 - NM_001142434 MGEA5 1 0.15 0.46 24 5.59 76.14 27 6.16 Yes 62 1.01 Yes 0 0 No -26 0.66 Yes 44 76.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103569796 - NM_001142434 MGEA5 1 0.11 0.29 17 2.4 0 57 8.01 Yes 73 0.67 No 0 0 No -48 0.62 No 22 76.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 103570039 - NM_001142434 MGEA5 1 0.14 0.4 23 -4.87 68.76 23 4.88 No 10 1.13 Yes 0 0 No -25 0.77 Yes 45 82.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103570086 - NM_001142434 MGEA5 1 0.21 0.61 32 4.53 65.04 31 6.08 Yes 53 1.38 Yes 23 0.79 Yes -30 0.49 No 40 55.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 103571293 - NM_001142434 MGEA5 1 0.1 0.26 18 5.84 80.84 20 5.57 Yes 7 0.9 Yes 0 0 No -19 0.63 No 51 81.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 103572138 - NM_001142434 MGEA5 1 1.41 3.75 68 8.1 88.21 27 5.2 No 57 0.65 No 0 0 No -26 0.77 Yes 44 65.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 103572681 - NM_001142434 MGEA5 1 0.12 0.35 19 10.74 92.08 23 6.29 Yes 10 0.96 Yes 25 0.7 Yes -25 0.67 Yes 48 46.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 103575586 - NM_001142434 MGEA5 1 0.26 0.4 20 7 76.37 70 8.36 Yes 57 0.14 No 0 0 No -35 0.52 No 35 71.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 127412045 - NM_007283 MGLL 1 0.32 0.78 40 4.87 81.08 30 4.69 No 56 -4.78 No 0 0 No -32 0.68 Yes 38 77.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 127412250 - NM_007283 MGLL 1 0.13 0.35 19 5.13 78.49 20 5.44 No 7 1.33 Yes 0 0 No -19 0.59 No 51 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 127413110 - NM_007283 MGLL 1 0.29 0.74 33 11.46 95.65 174 12.4 Yes NA NA NA 0 0 No -34 0.27 No 46 34.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 127413899 - NM_007283 MGLL 1 0.34 0.53 29 9.24 90.32 25 6 Yes 12 1.7 Yes 0 0 No -24 0.88 Yes 46 92.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127423965 - NM_007283 MGLL 1 0.4 0.63 26 8.54 87.28 26 4.11 No 38 1.01 Yes 0 0 No -32 0.57 No 38 45.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 127424617 - NM_007283 MGLL 1 0.39 0.58 32 4.56 84.41 83 8.34 Yes 64 1.28 Yes 0 0 No -44 0.74 Yes 26 68.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 127425831 - NM_007283 MGLL 1 0.07 0.14 8 -16.77 55.83 57 7.93 Yes 44 1.44 Yes 0 0 No -56 0.94 Yes 14 93.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127426288 - NM_007283 MGLL 1 0.13 0.19 10 1.9 68.76 28 6.49 Yes 15 1.15 Yes 0 0 No -27 0.83 Yes 43 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127427314 - NM_007283 MGLL 1 0.33 0.53 27 6.66 84.69 27 5.43 No 14 0.59 No 0 0 No -27 0.63 No 43 61.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 127434774 - NM_007283 MGLL 1 0.16 0.46 25 9.23 78.75 14 3.85 No 1 0.78 Yes 24 0.64 Yes -23 0.64 No 47 67.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 127435126 - NM_007283 MGLL 1 0.28 0.83 37 10.18 91.64 19 5.47 No 42 0.48 No 0 0 No -18 0.54 No 52 45.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 127454737 - NM_007283 MGLL 1 1 2.04 59 10.21 88.01 13 3.75 No 56 1.29 Yes 0 0 No -26 0.58 No 49 60.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 127463502 - NM_007283 MGLL 1 0.06 0.13 7 8.1 94.44 28 5.48 No 34 0.45 No 0 0 No -27 0.84 Yes 43 96.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 127464027 - NM_007283 MGLL 1 0.59 1.1 39 7.29 87.57 40 6.49 Yes 27 1.21 Yes 0 0 No -27 0.81 Yes 43 85.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127464161 - NM_007283 MGLL 1 1.31 2.85 57 6.51 92.42 26 6.85 Yes 58 0.67 No 0 0 No -26 0.4 No 46 36.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 127464318 - NM_007283 MGLL 1 0.27 0.61 27 10.13 86.95 51 7.57 Yes 2 0.56 No 0 0 No -24 0.64 No 46 69.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 127473627 - NM_007283 MGLL 1 1.66 3.22 62 6.34 84.47 35 8.09 Yes 22 1.35 Yes 0 0 No -37 0.87 Yes 33 83.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127473630 - NM_007283 MGLL 1 2.04 3.68 62 4.44 83.42 32 7.92 Yes 19 1.35 Yes 0 0 No -34 0.88 Yes 36 86.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127513736 - NM_007283 MGLL 1 2.14 5.1 66 6.43 83.18 16 4.21 No 3 1.37 Yes 0 0 No -25 0.37 No 38 56.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 127516288 - NM_007283 MGLL 1 0.06 0.14 7 8.13 97.06 16 3.47 No 3 1.1 Yes 0 0 No -21 0.91 Yes 49 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127517774 - NM_007283 MGLL 1 0.22 0.53 26 9.73 83.07 27 5.74 Yes 14 1.07 Yes 0 0 No -26 0.74 Yes 44 89.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127536434 - NM_007283 MGLL 1 4.42 9.85 72 5.22 82.42 26 5.62 Yes -1 1.31 Yes 0 0 No -28 0.42 No 36 46.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 127539714 - NM_007283 MGLL 1 0.09 0.19 12 8.64 82.19 37 6.07 Yes 24 1.01 Yes 0 0 No -36 0.74 Yes 34 90.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 131336596 + NM_002412 MGMT 1 0.23 0.18 11 8.93 89.15 42 6.29 Yes 29 1.09 Yes 0 0 No -23 0.58 No 47 68.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 131362042 + NM_002412 MGMT 1 0.12 0.14 7 4.53 88 21 3.65 No 67 1.2 Yes 32 0.62 Yes -20 0.59 No 50 65.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 131445025 + NM_002412 MGMT 1 0.52 0.43 22 7.36 87.3 47 6.69 Yes 34 -2.88 No 0 0 No -30 0.28 No 38 39.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 131508951 + NM_002412 MGMT 1 0.27 0.17 12 8.32 92.23 24 5.48 No 66 1.16 Yes 0 0 No -23 0.56 No 44 87.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 131513783 + NM_002412 MGMT 1 0.42 0.18 9 5.53 80.85 21 5.76 Yes 8 0.97 Yes 20 0.49 Yes -37 0.56 No 37 75.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 4684562 + NM_001142290 MGRN1 1 0.39 0.82 30 6.53 74.58 20 5.83 Yes 7 1.7 Yes 0 0 No -19 0.71 Yes 51 70.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4684723 + NM_001142290 MGRN1 1 0.46 0.9 39 8.15 79.36 32 5.02 No 19 0.63 No 0 0 No -31 0.71 Yes 39 78.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4693994 + NM_001142290 MGRN1 1 0.18 0.39 23 2.89 83.28 37 6.05 Yes 24 1.07 Yes 0 0 No -30 0.78 Yes 40 74.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4707252 + NM_001142290 MGRN1 1 0.1 0.24 15 -1.03 0 14 3.79 No 19 1.62 Yes 0 0 No -31 0.95 Yes 39 93.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4708183 + NM_001142290 MGRN1 1 0.22 0.49 24 10.2 87.19 44 6.88 Yes 31 0.23 No 0 0 No -43 0.58 No 27 85.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 4715099 + NM_001142290 MGRN1 1 9.66 20.33 72 10.55 82.36 25 6.71 Yes 12 1.93 Yes 24 0.94 Yes -24 0.8 Yes 46 83.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4722400 + NM_001142290 MGRN1 1 0.34 0.81 36 5.2 76.21 28 5.37 No 15 1.18 Yes 27 0.92 Yes -27 0.79 Yes 43 79.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4723233 + NM_001142290 MGRN1 1 0.12 0.28 18 11.27 90.32 14 6.05 Yes 41 1.62 Yes 0 0 No -30 0.67 Yes 40 83.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4726921 + NM_001142290 MGRN1 1 0.06 0.1 7 5.12 83.76 16 5.19 No 30 1.54 Yes 21 0.87 Yes -21 0.91 Yes 49 91.01 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4731671 + NM_001142290 MGRN1 1 0.07 0.11 7 2.22 80.43 19 4.19 No 55 1.02 Yes 0 0 No -21 0.94 Yes 49 91.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4731671 + NM_001142290 MGRN1 1 0.12 0.18 10 2.22 80.43 19 4.19 No 55 1.02 Yes 0 0 No -21 0.94 Yes 49 91.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4738796 + NM_001142290 MGRN1 1 866.75 128.47 72 13.27 86.95 29 6.4 Yes 16 1.86 Yes 28 0.91 Yes -28 0.91 Yes 42 93.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 16513233 + NM_145764 MGST1 1 0.12 0.42 18 5.63 85.07 39 5.96 Yes 7 1.11 Yes 19 0.53 Yes -38 0.56 No 36 59.55 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 16516712 + NM_145764 MGST1 1 0.06 0.17 12 1.51 0 20 4.57 No 58 0.56 No 20 0.72 Yes -19 0.53 No 45 48.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 165604963 + NM_004528 MGST3 1 0.1 0.15 9 6.78 86.58 20 6.76 Yes 7 0.71 No 22 0.37 Yes -31 0.36 No 50 50.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 165618991 + NM_004528 MGST3 1 0.23 0.42 19 3.49 79.99 41 6.99 Yes 28 1.25 Yes 36 0.36 Yes -36 0.77 Yes 34 89.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 165620230 + NM_004528 MGST3 1 0.17 0.53 28 3.41 66.45 27 5.59 Yes 14 1.33 Yes 25 0.97 Yes -26 0.68 Yes 31 38.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 165621249 + NM_004528 MGST3 1 0.1 0.28 16 9.49 84.5 12 6 Yes -1 0.12 No 0 0 No -24 0.58 No 40 59.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 165623522 + NM_004528 MGST3 1 0.41 1.08 43 1.38 0 10 4 No 15 1.49 Yes 0 0 No -27 0.83 Yes 43 95.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 41291653 + NR_037775 MIA-RAB4B 1 0.48 0.61 31 8.82 80.32 36 6 Yes 56 1.15 Yes 0 0 No -27 0.56 No 35 63.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 41298121 + NR_037775 MIA-RAB4B 1 0.98 0.72 38 12.23 97.39 26 5.29 No 21 0.01 No 0 0 No -25 0.92 Yes 45 95.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 39748545 + NM_001247989 MIA2 1 0.27 0.29 12 0.45 0 35 4.7 No 22 0.5 No 0 0 No -34 0.72 Yes 36 74.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 39769805 + NM_001247989 MIA2 1 0.32 0.4 22 7.85 80.53 17 4.6 No 4 1 Yes 0 0 No -22 0.8 Yes 48 71.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39784862 + NM_001247989 MIA2 1 0.24 0.33 19 -5.08 60.25 22 3.39 No 23 0.33 No 0 0 No -21 0.75 Yes 30 31.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 39784889 + NM_001247989 MIA2 1 0.08 0.1 7 -13.36 0 21 5.53 No 5 0.6 No 0 0 No -26 0.54 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 39785982 + NM_001247989 MIA2 1 0.15 0.22 11 4.18 65.35 31 6.37 Yes 18 1.22 Yes 0 0 No -30 0.5 No 40 85.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 39793472 + NM_001247989 MIA2 1 4.44 2.14 57 10.44 84.63 35 6.95 Yes 22 1.2 Yes 0 0 No -34 0.76 Yes 36 80.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39799157 + NM_001247989 MIA2 1 0.14 0.11 8 10.54 88.97 32 7.09 Yes 19 1.17 Yes 0 0 No -31 0.78 Yes 39 65.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 222796648 + NM_001324063 MIA3 1 5.49 1.75 55 -1.79 56.6 50 5.15 No 32 0.89 Yes 0 0 No -44 0.73 Yes 26 75.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 222816532 + NM_001324063 MIA3 1 0.7 0.26 14 10.44 98.73 44 6.14 Yes 31 1.34 Yes 0 0 No -30 0.81 Yes 31 80.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 222822776 + NM_001324063 MIA3 1 0.12 0.17 11 4.76 85.49 34 4.87 No 21 2.32 Yes 0 0 No -33 0.85 Yes 37 93.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 222827569 + NM_001324063 MIA3 1 0.11 0.11 7 -13.75 0 9 4.27 No 63 0.03 No 23 0.57 Yes -12 0.29 No 58 24.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 222831476 + NM_001324063 MIA3 1 0.08 0.11 8 8.72 89 35 5.83 Yes 25 0.22 No 0 0 No -32 0.65 No 38 59.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 222835403 + NM_001324063 MIA3 1 0.17 0.18 12 -2.38 0 10 3.87 No 60 1.55 Yes 23 0.67 Yes -36 0.61 No 34 59.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 222835799 + NM_001324063 MIA3 1 0.97 0.71 37 2.51 70.6 19 9.02 Yes 40 1.26 Yes 0 0 No -23 0.59 No 47 73.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 222836229 + NM_001324063 MIA3 1 0.8 0.61 29 3.92 75.55 15 5.89 Yes 65 -3.06 No 24 0.51 Yes -35 0.51 No 46 51.42 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 222838224 + NM_001324063 MIA3 1 1.03 1.13 46 11.62 91.45 27 4.25 No 69 -2.05 No 27 0.54 Yes -29 0.57 No 47 34.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 19346020 + NM_020774 MIB1 1 0.95 1.24 46 4.05 86.39 20 4.9 No 7 0.22 No 0 0 No -19 0.85 Yes 51 90.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 19346034 + NM_020774 MIB1 1 0.14 0.18 12 -9.24 0 19 4.47 No 6 0.26 No 0 0 No -18 0.73 Yes 52 81.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 19348642 + NM_020774 MIB1 1 0.39 0.56 23 -1.27 0 17 4.58 No 60 0.37 No 0 0 No -20 0.91 Yes 50 86.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 19353591 + NM_020774 MIB1 1 0.1 0.17 10 -1.52 0 10 4 No 47 1.16 Yes 0 0 No -41 0.48 No 46 55.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 19354435 + NM_020774 MIB1 1 0.28 0.36 21 3.58 77.35 24 6.39 Yes 52 0.66 No 0 0 No -23 0.92 Yes 47 84.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 19358006 + NM_020774 MIB1 1 1.55 1.78 59 9.67 87.33 64 7.89 Yes 51 1.51 Yes 0 0 No -24 0.88 Yes 46 77.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 19362624 + NM_020774 MIB1 1 0.15 0.18 10 5.67 80.54 28 6.17 Yes 66 0.84 Yes 0 0 No -27 0.81 Yes 43 85.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 19371295 + NM_020774 MIB1 1 1.86 2.08 57 0.91 60.23 23 4.93 No 33 1.16 Yes 22 0.64 Yes -30 0.66 Yes 25 45.54 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 19379805 + NM_020774 MIB1 1 0.15 0.25 16 -5.47 0 30 5.56 Yes 60 1.04 Yes 0 0 No -29 0.53 No 42 64.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 19385517 + NM_020774 MIB1 1 0.22 0.18 11 8.94 82.44 27 5.8 Yes 11 0.73 No 0 0 No -27 0.51 No 47 52.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 19385575 + NM_020774 MIB1 1 0.23 0.22 15 5.84 74.33 14 5.23 No 1 0.92 Yes 0 0 No -26 0.59 No 44 60.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 19388572 + NM_020774 MIB1 1 2.14 1.99 61 10.14 89.87 38 3.71 No 25 0.16 No 0 0 No -27 0.71 Yes 43 57.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 19392352 + NM_020774 MIB1 1 0.4 0.36 17 8.24 93.61 34 4.72 No 56 0.42 No 23 0.6 Yes -23 0.62 No 47 67.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 19398472 + NM_020774 MIB1 1 0.1 0.13 8 6.12 78.76 44 4.86 No 51 0.32 No 0 0 No -36 0.45 No 29 59.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 19441887 + NM_020774 MIB1 1 0.11 0.11 8 4.18 0 43 8.15 Yes 30 0.94 Yes 0 0 No -45 0.23 No 28 37.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 19442964 + NM_020774 MIB1 1 0.18 0.18 11 1.15 0 35 6.08 Yes 63 0.98 Yes 0 0 No -34 0.88 Yes 36 93.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1552457 + NM_001170687 MIB2 1 5.05 0.44 21 8.89 91.41 23 4.54 No NA NA NA 26 0.79 Yes -26 0.82 Yes 44 80.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1559997 + NM_001170687 MIB2 1 1.19 0.24 15 4.61 85.13 24 5 No 11 0.85 Yes 0 0 No -23 0.85 Yes 47 84.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1560344 + NM_001170687 MIB2 1 1.73 0.32 19 -4.67 0 16 3.87 No -4 0.31 No 37 0.18 Yes -15 0.57 No 55 61.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 1560937 + NM_001170687 MIB2 1 4.81 1.19 47 0.32 0 17 3.64 No 59 1.29 Yes 22 0.62 Yes -23 0.56 No 47 48.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 1561288 + NM_001170687 MIB2 1 1.93 0.38 21 9.56 90.89 21 5.2 No 56 -2.87 No 0 0 No -20 0.66 No 50 49.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1563007 + NM_001170687 MIB2 1 1.24 0.22 14 -0.3 76.19 16 4.69 No 3 0.01 No 0 0 No -51 0.37 No 55 60.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1563395 + NM_001170687 MIB2 1 0.62 0.24 13 1.44 76.65 13 4.19 No 0 2.09 Yes 22 0.83 Yes -19 0.68 Yes 51 88.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 1564413 + NM_001170687 MIB2 1 4.32 0.49 25 8.68 76.95 20 4.94 No 58 1.02 Yes 27 0.56 Yes -27 0.47 No 46 33.06 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 1564518 + NM_001170687 MIB2 1 1.59 0.18 11 0.47 0 9 3.87 No 18 1.78 Yes 0 0 No -30 0.97 Yes 40 94.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 109767079 - NM_022765 MICAL1 1 0.92 0.53 29 -10.39 0 20 3.57 No 47 0.56 No 23 0.35 Yes -59 0.69 Yes 11 40.2 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 109767105 - NM_022765 MICAL1 1 5.72 3.6 67 4.06 73.43 34 7.21 Yes -2 0.98 Yes 23 0.35 Yes -33 0.73 Yes 37 85.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 109767156 - NM_022765 MICAL1 1 14.26 8.86 72 0.44 0 13 4.36 No 30 0.75 No 0 0 No -16 0.21 No 46 47.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 109767166 - NM_022765 MICAL1 1 0.41 0.25 15 0.75 67.77 33 6.24 Yes 20 0.75 No 0 0 No -32 0.65 No 38 83.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 109767561 - NM_022765 MICAL1 1 1.16 1.18 42 5.48 79.52 12 5.11 No -1 0.14 No 23 0.85 Yes -23 0.67 Yes 47 64.9 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 109768691 - NM_022765 MICAL1 1 0.49 0.49 25 7.07 80.56 23 6.51 Yes 70 1.99 Yes 0 0 No -22 0.86 Yes 48 92.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 109768781 - NM_022765 MICAL1 1 2.3 2.21 59 10.04 86.42 27 9.43 Yes 14 1.31 Yes 0 0 No -26 0.96 Yes 44 95.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 109768938 - NM_022765 MICAL1 1 1.74 1.13 48 -9.58 0 12 4 No 47 -3.92 No 23 0.88 Yes -11 0.7 Yes 53 49.98 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 109770074 - NM_022765 MICAL1 1 0.48 0.39 27 -1.49 0 12 4.24 No NA NA NA 20 0.7 Yes -29 0.61 No 44 57.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 109773323 - NM_022765 MICAL1 1 9.86 10.36 72 5.72 83.08 45 6.71 Yes 74 1.79 Yes 29 0.56 Yes -29 0.78 Yes 41 86.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 109773326 - NM_022765 MICAL1 1 1.9 2 61 6.05 91.14 42 6.48 Yes 71 1.79 Yes 29 0.56 Yes -26 0.76 Yes 44 87.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 109773735 - NM_022765 MICAL1 1 0.25 0.26 14 8.62 87.71 22 6.81 Yes 9 1.08 Yes 21 0.76 Yes -21 0.71 Yes 49 61.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 109775473 - NM_022765 MICAL1 1 0.2 0.1 7 7.19 88.38 19 7.48 Yes 6 -0.73 No 24 0.73 Yes -25 0.7 Yes 52 43.88 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 109776655 - NM_022765 MICAL1 1 0.56 0.26 14 9.57 86.08 26 5.48 No 13 1.18 Yes 0 0 No -25 0.95 Yes 45 97.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 18367125 - NM_015241 MICAL3 1 1.26 0.11 7 6.43 79.47 66 9.86 Yes 53 1.51 Yes 26 0.6 Yes -22 0.57 No 48 70.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 18382716 - NM_015241 MICAL3 1 0.41 0.1 7 8.56 93.35 16 5.09 No 3 0.88 Yes 0 0 No -23 0.76 Yes 47 65.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 38312434 + NM_033386 MICALL1 1 0.16 0.14 9 1.51 70.65 36 8.54 Yes 23 1.07 Yes 0 0 No -30 0.47 No 35 52.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 38322962 + NM_033386 MICALL1 1 0.39 0.26 15 2.21 69.66 29 5.92 Yes 16 1.26 Yes 0 0 No -28 0.8 Yes 42 91.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38328565 + NM_033386 MICALL1 1 0.47 0.35 21 -5.23 0 15 3.87 No 18 -2.26 No 32 0.65 Yes -25 0.82 Yes 45 89.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38328786 + NM_033386 MICALL1 1 0.16 0.1 7 -1.97 0 15 4.58 No 19 -0.14 No 20 0.91 Yes -18 0.78 Yes 52 51.22 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 38333091 + NM_033386 MICALL1 1 0.68 0.4 24 -3.88 0 24 7.13 Yes 11 1.98 Yes 0 0 No -33 0.95 Yes 37 95.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 74139342 - NM_006077 MICU1 1 0.62 0.39 20 6.93 93.48 16 5.56 Yes 27 1 Yes 30 0.45 Yes -24 0.4 No 46 51.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 74221080 - NM_006077 MICU1 1 0.15 0.13 9 9.66 86.59 19 4.99 No 49 1.49 Yes 0 0 No -24 0.61 No 46 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 74223139 - NM_006077 MICU1 1 1.26 0.99 39 8.48 83.92 16 3.91 No -3 1.16 Yes 0 0 No -22 0.46 No 48 59.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 74326518 - NM_006077 MICU1 1 0.37 0.25 14 7.38 88.34 18 6.26 Yes 10 1.32 Yes 0 0 No -22 0.7 Yes 48 64.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 74356169 - NM_006077 MICU1 1 0.63 0.47 26 5.24 89.33 25 5.2 No 74 -3.37 No 0 0 No -24 0.85 Yes 46 81.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 74356187 - NM_006077 MICU1 1 0.91 0.69 28 1.72 0 22 5 No 69 -5.01 No 0 0 No -22 0.69 Yes 48 70.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 74362700 - NM_006077 MICU1 1 0.68 0.5 26 6.53 85.61 27 7.62 Yes 14 1.4 Yes 0 0 No -26 0.95 Yes 44 95.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 22069982 - NM_152726 MICU2 1 0.55 0.72 36 3.52 70.86 44 6.94 Yes 31 1.05 Yes 0 0 No -43 0.54 No 27 54.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 22070298 - NM_152726 MICU2 1 0.06 0.1 7 0.39 77.77 25 4.75 No 0 0.78 Yes 0 0 No -24 0.67 Yes 35 68.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 22085358 - NM_152726 MICU2 1 0.06 0.11 7 2.93 0 9 3.87 No 13 1.13 Yes 0 0 No -25 0.73 Yes 45 83.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 22097166 - NM_152726 MICU2 1 0.05 0.1 7 9.4 92.6 33 6.71 Yes 20 0.69 No 0 0 No -32 0.45 No 38 46.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 22108216 - NM_152726 MICU2 1 0.1 0.21 11 10.57 88.27 30 6.55 Yes 41 1.29 Yes 0 0 No -25 0.53 No 45 66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 22122057 - NM_152726 MICU2 1 0.6 1 47 8.12 82.54 42 6.53 Yes 10 1.4 Yes 0 0 No -22 0.68 Yes 48 72.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 22132868 - NM_152726 MICU2 1 0.06 0.13 8 0.95 0 29 7.17 Yes 16 1.55 Yes 0 0 No -28 0.89 Yes 42 85.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 22139200 - NM_152726 MICU2 1 0.24 0.43 25 5.7 71.76 31 5.62 Yes 0 0.28 No 0 0 No -37 0.52 No 44 73.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 22176958 - NM_152726 MICU2 1 0.94 0.71 30 11.92 87.19 18 5.18 No 49 0.32 No 25 0.64 Yes -22 0.61 No 48 65.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1253952 + NM_177401 MIDN 1 13.33 8.9 72 11.89 83.86 21 6.32 Yes 8 2.27 Yes 20 0.93 Yes -20 0.91 Yes 50 91.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1254903 + NM_177401 MIDN 1 12.96 7.83 72 8.8 80.3 26 9.93 Yes 13 1.41 Yes 0 0 No -25 0.97 Yes 45 96.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1255488 + NM_177401 MIDN 1 0.9 0.57 27 6.98 78.22 21 6.78 Yes 76 1.46 Yes 0 0 No -20 0.83 Yes 50 69.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 39899046 + NM_019008 MIEF1 1 0.35 0.36 21 8.85 86.14 19 4.65 No 6 0.6 No 29 0.81 Yes -29 0.62 No 41 42.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 39899700 + NM_019008 MIEF1 1 1.02 0.99 42 10.84 85.17 22 6.48 Yes -3 0.42 No 29 0.43 Yes -21 0.5 No 49 55.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 39905342 + NM_019008 MIEF1 1 1.47 2.07 61 3.85 76.91 47 9.79 Yes 71 1.48 Yes 20 0.53 Yes -46 0.63 No 24 61.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 39905426 + NM_019008 MIEF1 1 5.17 7.03 71 5.66 86.96 27 5.42 No 18 0.7 No 26 0.78 Yes -26 0.56 No 44 73.01 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 39905448 + NM_019008 MIEF1 1 1.08 1.33 46 7.38 90.62 25 5 No -3 1.1 Yes 0 0 No -24 0.64 No 46 81.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 39908322 + NM_019008 MIEF1 1 68.92 40.13 72 8.93 87.31 23 5.4 No 18 -1.51 No 22 0.87 Yes -22 0.86 Yes 48 88.55 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 18166827 + NM_148886 MIEF2 1 1.43 0.11 8 2.1 83.68 17 4.69 No 26 0.97 Yes 0 0 No -19 0.55 No 51 75.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 18166986 + NM_148886 MIEF2 1 2.54 0.22 15 4.69 82 34 6.09 Yes 70 -3.25 No 33 0.12 Yes -33 0.47 No 59 36.21 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 18167097 + NM_148886 MIEF2 1 4.67 0.35 21 6.19 83.2 26 5.63 Yes -3 1 Yes 25 0.62 Yes -28 0.57 No 48 63.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 37885888 - NM_032339 MIEN1 1 0.13 0.25 14 5.43 78.17 16 6 Yes 3 1.08 Yes 26 0.75 Yes -40 0.49 No 41 46.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 67405868 + NM_001077701 MIER1 1 1.97 2.47 66 -2.41 56.73 43 7.75 Yes 30 1.67 Yes 26 0.9 Yes -42 0.86 Yes 28 91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 67412768 + NM_001077701 MIER1 1 0.41 0.5 16 1.99 72.27 24 5.15 No 11 0.11 No 0 0 No -23 0.67 Yes 38 56.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 67412771 + NM_001077701 MIER1 1 0.83 0.88 27 1.98 72.07 27 5.36 No 14 0.11 No 0 0 No -26 0.69 Yes 44 51.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 67414606 + NM_001077701 MIER1 1 0.64 0.82 34 10.9 94.56 20 6.48 Yes 7 0.62 No 0 0 No -26 0.61 No 44 79.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 67436565 + NM_001077701 MIER1 1 0.08 0.17 9 3.38 82.15 17 4.78 No 4 0.01 No 0 0 No -21 0.47 No 54 39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 67438557 + NM_001077701 MIER1 1 0.11 0.18 9 1.96 78.67 56 7.44 Yes 61 0.85 Yes 27 0.94 Yes -24 0.47 No 47 40.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 67438581 + NM_001077701 MIER1 1 0.07 0.11 7 -0.52 77.63 29 5.72 Yes 16 0.95 Yes 0 0 No -29 0.67 Yes 41 82.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 67440815 + NM_001077701 MIER1 1 0.14 0.21 14 9.06 87.18 32 4.5 No 66 -4.62 No 0 0 No -19 0.74 Yes 51 81.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 67442358 + NM_001077701 MIER1 1 0.47 0.68 33 3.56 87.64 24 7.49 Yes 11 0.72 No 0 0 No -23 0.84 Yes 47 84.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 67444349 + NM_001077701 MIER1 1 0.07 0.14 9 8.92 81.98 30 6.32 Yes 17 1.49 Yes 0 0 No -29 0.65 No 41 82.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 67444457 + NM_001077701 MIER1 1 0.07 0.15 9 9.95 93.78 20 4.69 No 7 0.67 No 0 0 No -19 0.96 Yes 51 98.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 67445034 + NM_001077701 MIER1 1 0.67 1.49 53 12.13 86.59 24 4.45 No 36 1.39 Yes 0 0 No -27 0.57 No 43 56.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 326892 - NM_017550 MIER2 1 0.51 0.14 9 7.38 82.09 34 5.74 Yes 50 -2.07 No 0 0 No -22 0.36 No 37 43.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 328584 - NM_017550 MIER2 1 0.74 0.32 16 4.93 85.02 17 5.29 No 4 1.05 Yes 0 0 No -16 0.42 No 47 72.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 328741 - NM_017550 MIER2 1 0.35 0.15 10 4.03 0 36 6.16 Yes 58 0.88 Yes 0 0 No -35 0.77 Yes 35 94.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 330378 - NM_017550 MIER2 1 0.4 0.17 9 4.6 86.46 24 7.42 Yes 11 1.3 Yes 0 0 No -23 0.93 Yes 47 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 330381 - NM_017550 MIER2 1 1.5 0.64 30 6.42 83.74 21 7.21 Yes 8 1.33 Yes 20 0.74 Yes -20 0.89 Yes 50 92.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 56219558 - NM_001297598 MIER3 1 3.01 1.54 49 3.97 79.35 21 5.2 No 17 1.61 Yes 0 0 No -29 0.6 No 41 58.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 56234166 - NM_001297598 MIER3 1 1.49 0.63 30 11.1 89.54 34 6.16 Yes 21 1.16 Yes 33 0.72 Yes -33 0.9 Yes 37 95.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 56234379 - NM_001297598 MIER3 1 0.24 0.1 7 3.34 71.41 14 3.66 No 40 1.24 Yes 0 0 No -31 0.25 No 46 26.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 56234917 - NM_001297598 MIER3 1 0.26 0.14 8 4.63 76.57 55 8.11 Yes 42 1.12 Yes 0 0 No -23 0.59 No 29 46.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73263979 - NM_001242498 MIF4GD 1 0.17 0.15 10 -0.34 0 28 7.51 Yes 15 1.33 Yes 0 0 No -27 0.88 Yes 43 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78248927 + NM_198549 MIGA1 1 17.16 2.33 60 -4.04 0 53 7.31 Yes 20 1.27 Yes 0 0 No -32 0.8 Yes 38 84.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78253692 + NM_198549 MIGA1 1 17.21 4.06 71 9.69 86.87 27 7.62 Yes 14 1.5 Yes 0 0 No -26 0.92 Yes 44 95.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78283664 + NM_198549 MIGA1 1 0.46 0.13 8 10.87 93.82 29 4.09 No 70 0.75 No 0 0 No -28 0.83 Yes 42 78.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 78305076 + NM_198549 MIGA1 1 0.43 0.13 7 10.44 87.15 35 4.7 No 26 0.88 Yes 0 0 No -34 0.57 No 42 60.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 78326957 + NM_198549 MIGA1 1 0.47 0.13 8 7.32 78.26 14 5.14 No 1 0.69 No 0 0 No -21 0.89 Yes 49 83.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 78332014 + NM_198549 MIGA1 1 0.57 0.13 9 3.42 0 21 5.57 Yes 8 0.28 No 29 0.39 Yes -25 0.7 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 78333199 + NM_198549 MIGA1 1 0.76 0.13 8 9.4 89.88 22 7.28 Yes 9 1.2 Yes 0 0 No -21 0.83 Yes 49 88.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78333932 + NM_198549 MIGA1 1 2.46 0.46 25 3.6 83.86 28 6.31 Yes 41 1.96 Yes 0 0 No -27 0.39 No 46 55.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 78338685 + NM_198549 MIGA1 1 54.05 10.14 72 5.64 86.56 25 5.86 Yes 12 1.32 Yes 25 0.82 Yes -24 0.8 Yes 46 80.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 78342299 + NM_198549 MIGA1 1 0.79 0.15 10 10.68 79.15 26 6.02 Yes 13 0.83 Yes 0 0 No -25 0.74 Yes 45 73.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78344440 + NM_198549 MIGA1 1 0.73 0.15 8 8.18 87.25 24 5.15 No 56 0.83 Yes 0 0 No -23 0.63 No 47 77.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 131821436 + NR_138422 MIGA2 1 0.55 0.18 10 -2.63 0 27 5.74 Yes -1 -1.51 No 0 0 No -26 0.92 Yes 44 86.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131821643 + NR_138422 MIGA2 1 0.99 0.31 18 5.81 79.8 25 5.57 Yes 25 -2.84 No 0 0 No -22 0.6 No 48 38.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 131821744 + NR_138422 MIGA2 1 0.44 0.11 7 8.24 89.64 24 5.48 No 11 0.57 No 0 0 No -23 0.83 Yes 47 84.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131830906 + NR_138422 MIGA2 1 1.06 0.19 12 0.29 65.88 90 9.98 Yes 8 0.79 Yes 0 0 No -20 0.45 No 44 59.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131831116 + NR_138422 MIGA2 1 8.29 1.61 57 9.56 84.76 22 5.66 Yes 56 -0.79 No 0 0 No -25 0.69 Yes 45 70.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131832110 + NR_138422 MIGA2 1 0.45 0.18 12 4.06 75.99 31 7.33 Yes 58 1.04 Yes 19 0.81 Yes -30 0.65 No 40 75.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 12082156 + NM_021933 MIIP 1 0.11 0.1 7 -1.28 0 25 6.86 Yes 12 1.72 Yes 0 0 No -24 0.88 Yes 46 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12089120 + NM_021933 MIIP 1 0.13 0.15 10 5.52 84.32 18 4.9 No 46 -0.21 No 24 0.7 Yes -22 0.76 Yes 48 65.49 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 12089790 + NM_021933 MIIP 1 0.23 0.18 9 5.7 81.63 32 5.91 Yes 28 -0.73 No 27 0.39 Yes -28 0.66 Yes 42 61.48 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 12091358 + NM_021933 MIIP 1 0.18 0.19 12 3.92 78.52 41 6.71 Yes 42 1.25 Yes 0 0 No -31 0.61 No 47 51.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 12091597 + NM_021933 MIIP 1 1.98 2.24 63 6.97 93.65 16 4.57 No 26 -1.35 No 23 0.52 Yes -23 0.77 Yes 47 74.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4784408 + NM_001321236 MINK1 1 1.05 0.79 40 -8.34 0 10 4 No 76 -5.64 No 26 0.18 Yes -9 0.52 No 46 50.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 4789788 + NM_001321236 MINK1 1 1.08 0.53 26 0.7 72.37 27 4.67 No 5 1.23 Yes 0 0 No -21 0.49 No 49 68.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 4792947 + NM_001321236 MINK1 1 0.34 0.18 10 -3.08 0 11 3.87 No 41 0.68 No 0 0 No -30 0.82 Yes 40 62.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 4793516 + NM_001321236 MINK1 1 1.93 0.71 34 6.62 82.7 157 13.04 Yes NA NA NA 27 0.78 Yes -52 0.44 No 17 9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 4793533 + NM_001321236 MINK1 1 1.49 0.51 28 1.93 88.96 20 5.1 No NA NA NA 0 0 No -44 0.29 No 51 33.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4794810 + NM_001321236 MINK1 1 44.34 9.17 72 4.79 73.9 29 5.39 No 21 0.5 No 22 0.7 Yes -22 0.66 Yes 48 66.45 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 4796240 + NM_001321236 MINK1 1 1.18 0.61 31 6.18 88.38 19 5 No 6 0.08 No 24 0.89 Yes -18 0.72 Yes 52 81.03 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4796580 + NM_001321236 MINK1 1 2.43 1.28 44 6.67 76.29 42 7.09 Yes 63 3.22 Yes 41 0.28 Yes -41 0.62 No 29 88.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 4797285 + NM_001321236 MINK1 1 50.84 17.26 72 7.05 82.48 21 6 Yes NA NA NA 0 0 No -29 0.68 Yes 41 81.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4798375 + NM_001321236 MINK1 1 1.55 1 44 -0.21 0 14 3.87 No 70 -1.45 No 0 0 No -40 0.7 Yes 30 70.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4798630 + NM_001321236 MINK1 1 0.4 0.36 18 1.08 71.12 20 5.09 No -1 1.25 Yes 25 0.85 Yes -19 0.72 Yes 51 59.33 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 4799729 + NM_001321236 MINK1 1 0.38 0.29 17 0.91 0 9 3.87 No NA NA NA 0 0 No -27 0.66 Yes 43 82.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4799988 + NM_001321236 MINK1 1 0.15 0.13 8 5.77 80.62 25 4.25 No 23 1.89 Yes 0 0 No -24 0.38 No 27 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19949971 + NR_033757 MINOS1 1 0.03 0.21 14 -3.8 0 41 7.51 Yes 28 0.77 Yes 0 0 No -40 0.53 No 27 60.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19950270 + NR_033757 MINOS1 1 0.03 0.19 11 8.97 85.1 22 5.2 No 53 1.43 Yes 0 0 No -21 0.76 Yes 49 76.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 19951885 + NR_033757 MINOS1 1 0.23 1.47 51 7.52 73.28 25 5.3 No 62 -3.1 No 24 0.4 Yes -26 0.75 Yes 46 69.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 89274517 + NM_001178118 MINPP1 1 0.72 0.39 26 6.99 90.11 27 5.39 No 57 1.64 Yes 0 0 No -26 0.81 Yes 44 72.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89306329 + NM_001178118 MINPP1 1 0.13 0.13 8 7.93 82.23 33 7.45 Yes 20 1.08 Yes 32 0.67 Yes -32 0.58 No 34 77.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 7613725 + NM_019005 MIOS 1 0.11 0.17 12 -6.1 0 25 5.29 No 76 1.53 Yes 27 0.86 Yes -24 0.61 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 7622260 + NM_019005 MIOS 1 1.41 1.71 53 6.16 89.47 22 5.63 Yes 9 1.11 Yes 21 0.65 Yes -22 0.43 No 48 62.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 7625269 + NM_019005 MIOS 1 0.43 0.57 24 -13.65 62.85 30 5.74 Yes 73 1.16 Yes 0 0 No -26 0.66 No 45 60.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 7625408 + NM_019005 MIOS 1 0.08 0.11 7 2.48 65.55 38 7.1 Yes 25 1.41 Yes 0 0 No -37 0.79 Yes 33 83.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 7629043 + NM_019005 MIOS 1 0.22 0.38 23 -1.16 0 11 4.12 No 35 0.11 No 0 0 No -33 0.75 Yes 37 90.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 7645575 + NM_019005 MIOS 1 0.37 0.61 28 -6.87 80.57 30 5.35 No 17 0.29 No 0 0 No -29 0.79 Yes 41 89.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 24334873 - NM_005932 MIPEP 1 0.27 0.19 10 8.57 70.8 30 7.94 Yes 17 0.3 No 0 0 No -29 0.58 No 41 52.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 24372995 - NM_005932 MIPEP 1 2.95 1.79 54 7.37 90.03 22 5.9 Yes 74 0.9 Yes 0 0 No -21 0.84 Yes 49 88.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 24394386 - NM_005932 MIPEP 1 0.39 0.18 12 8.32 90.63 33 7 Yes 20 2.2 Yes 0 0 No -32 0.83 Yes 38 92.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 24416709 - NM_005932 MIPEP 1 0.98 0.65 34 10.84 91.28 16 5.56 Yes 51 0.89 Yes 26 0.39 Yes -32 0.45 No 42 43.82 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 24443527 - NM_005932 MIPEP 1 0.66 0.33 16 0.04 63.96 46 6.81 Yes 71 1.09 Yes 0 0 No -45 0.82 Yes 25 87.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 24460047 - NM_005932 MIPEP 1 1.83 0.76 36 8.79 87 43 8.34 Yes 52 0.34 No 0 0 No -37 0.6 No 33 53.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 26935091 + NR_001458 MIR155HG 1 0.09 0.79 37 7.64 88.75 19 4.71 No 59 0.45 No 0 0 No -30 0.53 No 40 57.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 26935151 + NR_001458 MIR155HG 1 0.05 0.4 20 6.01 87.33 38 5.99 Yes 25 1.07 Yes 0 0 No -37 0.7 Yes 33 67.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 26937068 + NR_001458 MIR155HG 1 0.08 0.61 29 4.92 88.5 25 5.38 No 12 0.77 Yes 0 0 No -24 0.82 Yes 46 88.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 26937255 + NR_001458 MIR155HG 1 0.34 3.25 62 2.45 84.54 21 6.55 Yes 8 0.02 No 0 0 No -26 0.69 Yes 44 65.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 26939488 + NR_001458 MIR155HG 1 0.44 3.64 63 6.07 83.67 24 6 Yes 36 0.25 No 0 0 No -23 0.73 Yes 47 70.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 26939699 + NR_001458 MIR155HG 1 0.09 0.75 32 4.71 77.5 23 6.68 Yes 10 1 Yes 0 0 No -22 0.87 Yes 48 90.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 26944566 + NR_001458 MIR155HG 1 0.09 0.67 28 8.1 89.19 26 4.45 No 69 1.48 Yes 0 0 No -25 0.79 Yes 45 87.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 45687636 - NM_018353 MIS18BP1 1 2.52 1.58 56 5.58 72.94 27 5.57 Yes 31 0.42 No 26 0.52 Yes -26 0.5 No 44 72.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 45701831 - NM_018353 MIS18BP1 1 0.82 0.6 30 5.24 80.12 20 5.57 Yes 7 1.02 Yes 19 0.68 Yes -24 0.63 No 46 70.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 45701979 - NM_018353 MIS18BP1 1 1.72 1.13 48 6.34 84.24 29 5.44 No 65 0.15 No 0 0 No -28 0.93 Yes 42 96.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 45705146 - NM_018353 MIS18BP1 1 0.2 0.24 13 -0.98 83.84 32 6.87 Yes 19 0.85 Yes 0 0 No -26 0.77 Yes 44 90.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 45706523 - NM_018353 MIS18BP1 1 1.58 1.72 50 5.06 76.43 23 3.99 No 10 0.45 No 0 0 No -22 0.38 No 48 68.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 45706921 - NM_018353 MIS18BP1 1 0.2 0.17 11 -1.6 0 42 6.63 Yes 29 0.27 No 0 0 No -37 0.45 No 33 62.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 45719257 - NM_018353 MIS18BP1 1 0.59 0.15 9 1.88 65.42 28 6.69 Yes 1 0.42 No 0 0 No -27 0.71 Yes 43 86.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 45719342 - NM_018353 MIS18BP1 1 31.85 9.35 72 5.06 72.36 33 7.15 Yes 20 1.45 Yes 32 0.88 Yes -32 0.87 Yes 38 95.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 45721969 - NM_018353 MIS18BP1 1 0.65 0.15 10 12.07 88.27 28 5.3 No 15 0.91 Yes 0 0 No -27 0.76 Yes 43 79.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 45722127 - NM_018353 MIS18BP1 1 2.09 0.61 33 9.04 87.64 28 6.85 Yes 73 2.48 Yes 0 0 No -27 0.97 Yes 43 97.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 99785932 - NM_001320417 MITD1 1 0.16 0.19 10 -2.31 79.17 26 6.56 Yes 13 1.16 Yes 0 0 No -28 0.7 Yes 42 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 99788124 - NM_001320417 MITD1 1 0.12 0.19 14 3.87 80.21 20 5.25 No 60 0.85 Yes 24 0.69 Yes -19 0.73 Yes 51 39.89 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 99789963 - NM_001320417 MITD1 1 0.41 0.61 32 -6.43 50.16 63 8.65 Yes 50 0.96 Yes 0 0 No -56 0.4 No 14 57.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 99789966 - NM_001320417 MITD1 1 2.89 4.5 69 -3 55.18 60 8.49 Yes 47 0.95 Yes 24 0.72 Yes -53 0.34 No 17 55.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 129897095 - NM_001145966 MKI67 1 0.06 0.18 12 8.01 91.27 46 5.92 Yes 33 0.94 Yes 0 0 No -34 0.8 Yes 36 82.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 129899890 - NM_001145966 MKI67 1 0.39 1.15 44 3.54 86.35 23 4.88 No 10 0.71 No 22 0.85 Yes -22 0.72 Yes 48 72.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 129899893 - NM_001145966 MKI67 1 0.12 0.42 23 0.77 70.93 20 4.57 No 7 0.74 No 22 0.85 Yes -19 0.77 Yes 51 71.05 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 129908150 - NM_001145966 MKI67 1 0.32 0.94 46 7.31 87.69 40 7.5 Yes 27 1.46 Yes 0 0 No -32 0.64 No 38 75.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 129908239 - NM_001145966 MKI67 1 0.32 0.94 38 9.21 80.89 42 6.78 Yes -3 1.49 Yes 0 0 No -30 0.46 No 29 60.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 129908792 - NM_001145966 MKI67 1 0.02 0.1 7 -3.64 0 16 3.62 No 68 -3.1 No 0 0 No -32 0.45 No 34 68.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 129910078 - NM_001145966 MKI67 1 0.14 0.46 21 1.2 73.47 37 7.43 Yes 24 1.3 Yes 0 0 No -37 0.58 No 33 75.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 129910292 - NM_001145966 MKI67 1 0.14 0.58 28 2.08 61.86 23 5.2 No 40 1.22 Yes 0 0 No -45 0.69 Yes 18 72.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 129910332 - NM_001145966 MKI67 1 0.05 0.18 11 0.8 68.46 37 4.93 No 0 1.23 Yes 27 0.77 Yes -36 0.62 No 34 78.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 129910704 - NM_001145966 MKI67 1 0.31 1.14 48 -0.17 0 9 3.87 No 73 0.57 No 0 0 No -37 0.72 Yes 33 57.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 129914272 - NM_001145966 MKI67 1 134.17 135.65 72 1.97 67.35 36 6.27 Yes 23 1.57 Yes 35 0.82 Yes -34 0.64 No 35 89.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 129914800 - NM_001145966 MKI67 1 0.03 0.14 7 -5.28 0 28 6.86 Yes 15 1.36 Yes 0 0 No -27 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 129921532 - NM_001145966 MKI67 1 0.1 0.22 13 9.38 85.82 45 7.74 Yes 32 0.45 No 0 0 No -23 0.42 No 26 68.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 10389335 - NM_018848 MKKS 1 0.47 0.11 8 2.62 72.27 31 7.55 Yes 6 0.33 No 0 0 No -31 0.66 No 39 76.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 10393223 - NM_018848 MKKS 1 0.4 0.51 31 4.85 77.72 38 6.06 Yes 72 0.99 Yes 0 0 No -25 0.91 Yes 45 91.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 40813453 - NM_001318139 MKL1 1 2.19 1.4 53 8.88 79.66 23 5.39 No NA NA NA 0 0 No -22 0.82 Yes 48 90.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 40831249 - NM_001318139 MKL1 1 0.45 0.38 21 8.64 81.35 26 5.66 Yes 54 0.8 Yes 0 0 No -29 0.75 Yes 41 78.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14186577 + NM_014048 MKL2 1 13.78 5.28 69 4.74 73.13 34 6.3 Yes 32 -4.3 No 29 0.85 Yes -29 0.85 Yes 41 82.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 14235163 + NM_014048 MKL2 1 1.22 0.42 21 7.09 89.46 28 5.91 Yes 33 1.06 Yes 27 0.43 Yes -33 0.75 Yes 46 51.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 14242523 + NM_014048 MKL2 1 2.08 0.74 30 4.8 84.07 92 9.66 Yes 55 1.97 Yes 27 0.91 Yes -27 0.75 Yes 43 85.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 14243142 + NM_014048 MKL2 1 1.19 0.42 23 4.83 81.71 25 6.48 Yes 12 1.23 Yes 24 0.97 Yes -24 0.86 Yes 46 94.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 14263997 + NM_014048 MKL2 1 0.32 0.11 7 8.92 84.16 43 7.73 Yes 30 1.12 Yes 31 0.61 Yes -42 0.83 Yes 28 86.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 14308729 + NM_014048 MKL2 1 1.03 0.31 18 9.18 90.21 28 6.27 Yes 53 0.54 No 27 0.7 Yes -22 0.71 Yes 48 88.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 14331871 + NM_014048 MKL2 1 0.39 0.1 7 9.2 84.58 16 5.13 No 57 -2.5 No 0 0 No -23 0.87 Yes 47 85.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 131083996 + NM_001145354 MKLN1 1 4.39 7.82 72 5.95 73.8 39 7.48 Yes 26 1.87 Yes 38 0.8 Yes -38 0.89 Yes 32 95.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 131113793 + NM_001145354 MKLN1 1 0.11 0.13 9 -4.43 76.54 53 6.06 Yes 40 1.19 Yes 0 0 No -27 0.67 Yes 43 73.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 131149039 + NM_001145354 MKLN1 1 0.21 0.21 11 -0.69 60.84 23 4.69 No 45 0.33 No 22 0.88 Yes -44 0.76 Yes 26 83.62 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 131156399 + NM_001145354 MKLN1 1 0.43 0.53 28 10.85 98.54 35 9.19 Yes 22 1.13 Yes 34 0.53 Yes -34 0.7 Yes 32 65.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 131172441 + NM_001145354 MKLN1 1 5.25 6.26 71 6.92 89.49 29 4.79 No 55 0.99 Yes 0 0 No -28 0.69 Yes 42 64.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 47027346 - NR_024176 MKNK1 1 0.9 0.22 14 6.62 78.75 29 5.74 Yes 16 0.91 Yes 28 0.82 Yes -28 0.88 Yes 42 67.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 47028065 - NR_024176 MKNK1 1 1.34 0.35 19 4.74 84.41 33 7.46 Yes 20 2.46 Yes 0 0 No -32 0.87 Yes 38 89.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2037570 - NM_017572 MKNK2 1 0.05 0.17 10 5.32 80.04 16 4.74 No 72 -3.22 No 0 0 No -24 0.41 No 49 47.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2037832 - NM_017572 MKNK2 1 0.03 0.13 8 2.34 0 38 6.4 Yes 32 0.75 No 37 0.27 Yes -34 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 2038883 - NM_017572 MKNK2 1 0.11 0.38 21 7.68 75.84 15 6.18 Yes 2 0.47 No 0 0 No -20 0.7 Yes 50 56.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 2038931 - NM_017572 MKNK2 1 0.06 0.21 11 7.07 89.35 21 5.2 No 58 1.32 Yes 0 0 No -21 0.72 Yes 49 80.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2039850 - NM_017572 MKNK2 1 0.49 1.57 55 0.17 0 9 3.87 No 21 1.78 Yes 0 0 No -33 0.88 Yes 37 94.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2039856 - NM_017572 MKNK2 1 386.33 1214.31 72 7.13 84.62 28 7.12 Yes 15 1.79 Yes 27 0.9 Yes -27 0.89 Yes 43 95.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2040204 - NM_017572 MKNK2 1 0.01 0.15 9 0.41 0 14 4.47 No 59 0.26 No 29 0.81 Yes -19 0.19 No 57 20.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 2040246 - NM_017572 MKNK2 1 0.02 0.42 23 1.96 77.56 30 8.37 Yes 17 0.22 No 0 0 No -29 0.77 Yes 41 66.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 2042507 - NM_017572 MKNK2 1 0.03 0.61 28 3.86 74.16 18 4.9 No 26 1.34 Yes 0 0 No -38 0.97 Yes 32 96.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2042674 - NM_017572 MKNK2 1 0.04 0.88 38 -1.41 0 21 5.92 Yes 8 0.43 No 18 0.89 Yes -20 0.94 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 2042761 - NM_017572 MKNK2 1 0.01 0.22 14 -1.47 0 33 6.22 Yes 59 -4.66 No 0 0 No -10 0.36 No 60 52.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2046272 - NM_017572 MKNK2 1 0.01 0.14 8 -1.29 0 20 4.47 No 22 1.78 Yes 0 0 No -34 0.92 Yes 36 88.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2046455 - NM_017572 MKNK2 1 0.03 0.28 17 -2.29 68.64 23 4.69 No 29 -1.63 No 0 0 No -41 0.63 No 52 33.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2046473 - NM_017572 MKNK2 1 0.01 0.11 8 -1.42 0 24 5.48 No 11 -0.47 No 28 0.85 Yes -23 0.85 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 2046685 - NM_017572 MKNK2 1 0.02 0.21 14 -1.07 0 15 3.85 No 22 1.35 Yes 26 0.43 Yes -34 0.87 Yes 36 90.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2049616 - NM_017572 MKNK2 1 0.01 0.13 8 3.97 77.14 22 5.2 No 50 -3.84 No 0 0 No -21 0.76 Yes 49 65.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 2049689 - NM_017572 MKNK2 1 0.05 0.38 20 9.47 84.08 23 5.2 No 10 1.19 Yes 0 0 No -22 0.91 Yes 48 92.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2050568 - NM_017572 MKNK2 1 0.14 1.28 50 10.25 90.83 25 5.89 Yes 69 -1.18 No 0 0 No -28 0.73 Yes 42 83.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 140154403 - NM_013446 MKRN1 1 0.19 0.28 14 8.5 91.19 17 5.82 Yes 4 0.78 Yes 0 0 No -25 0.55 No 54 67.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 140154584 - NM_013446 MKRN1 1 0.18 0.25 15 5.91 77.7 63 7.63 Yes 63 -2.45 No 0 0 No -23 0.46 No 28 47.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 140156616 - NM_013446 MKRN1 1 0.13 0.17 11 6.1 83.1 14 5.2 No 75 1.51 Yes 0 0 No -26 0.61 No 50 43.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 140159709 - NM_013446 MKRN1 1 0.07 0.18 13 2.26 68.59 24 5 No 36 0.43 No 0 0 No -48 0.75 Yes 22 74.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 140159735 - NM_013446 MKRN1 1 0.06 0.15 8 -8.11 0 23 7.07 Yes 10 0.49 No 0 0 No -22 0.88 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 140165270 - NM_013446 MKRN1 1 0.05 0.15 10 12.26 87.15 21 7 Yes 8 1.46 Yes 0 0 No -20 0.86 Yes 50 89.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 140170017 - NM_013446 MKRN1 1 0.27 0.69 28 5.62 85.05 28 7 Yes 15 1.85 Yes 0 0 No -27 0.97 Yes 43 98.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 140174290 - NM_013446 MKRN1 1 0.38 0.56 28 2.79 83.95 19 4.76 No 47 0.66 No 30 0.77 Yes -30 0.82 Yes 40 85.39 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 12604336 + NM_014160 MKRN2 1 0.71 0.53 27 8.65 76.43 39 5.14 No 19 1.18 Yes 0 0 No -31 0.6 No 39 79.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 12616341 + NM_014160 MKRN2 1 0.08 0.1 7 6.12 94.64 9 4.81 No 27 0.1 No 0 0 No -20 0.74 Yes 50 66.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56285091 - NM_017777 MKS1 1 2.53 0.31 19 6.82 69.39 26 5.66 Yes 13 0.59 No 25 0.87 Yes -25 0.85 Yes 45 60.14 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 56285612 - NM_017777 MKS1 1 0.81 0.22 11 7.43 78.51 27 5.54 No 11 0.67 No 26 0.85 Yes -24 0.48 No 46 57.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 56286255 - NM_017777 MKS1 1 0.92 0.38 22 7.85 85.08 21 5.2 No 29 -2.46 No 0 0 No -18 0.44 No 49 42.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56292260 - NM_017777 MKS1 1 1.97 0.57 29 -0.34 0 22 4.58 No 67 -4.55 No 21 0.93 Yes -21 0.86 Yes 52 59.87 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 56294107 - NM_017777 MKS1 1 1.11 0.33 19 -3.36 0 14 3.92 No -3 1.1 Yes 31 0.79 Yes -22 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 6858345 - NR_026581 MLF2 1 0.02 0.1 7 7.19 89.94 26 4.44 No 2 1.23 Yes 0 0 No -25 0.72 Yes 45 78.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6861174 - NR_026581 MLF2 1 0.04 0.22 12 3.77 82.15 17 4.8 No 44 1.07 Yes 0 0 No -21 0.77 Yes 49 74.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6861282 - NR_026581 MLF2 1 0.03 0.13 8 11 98.34 30 7 Yes NA NA NA 0 0 No -29 0.77 Yes 41 85.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6861554 - NR_026581 MLF2 1 0.04 0.14 7 -2.23 64.88 33 6.24 Yes 74 -6.9 No 19 0.79 Yes -32 0.89 Yes 38 75.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 37036320 + NM_001258274 MLH1 1 7.27 1.58 53 9.3 87.64 39 4.31 No 30 0.19 No 24 0.76 Yes -24 0.64 No 46 74.02 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 37038114 + NM_001258274 MLH1 1 4.18 0.9 37 2.8 0 34 6.75 Yes 21 0.88 Yes 28 0.87 Yes -33 0.69 Yes 37 80.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 37048483 + NM_001258274 MLH1 1 0.1 0.19 13 -0.53 80.6 25 7.55 Yes 67 0.76 No 0 0 No -24 0.85 Yes 46 89.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37053505 + NM_001258274 MLH1 1 0.18 0.42 23 -4.23 0 37 7.11 Yes 24 0.92 Yes 22 0.47 Yes -37 0.4 No 33 61.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 37055924 + NM_001258274 MLH1 1 0.09 0.18 12 -6.19 79.5 22 5.29 No 52 1.34 Yes 0 0 No -21 0.82 Yes 49 79.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37061805 + NM_001258274 MLH1 1 0.12 0.24 15 1.22 0 32 6.29 Yes 19 0.98 Yes 0 0 No -31 0.54 No 39 71.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37065356 + NM_001258274 MLH1 1 0.39 0.68 33 9.12 96.13 41 6.83 Yes 51 0.59 No 0 0 No -40 0.67 Yes 30 90.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37090004 + NM_001258274 MLH1 1 0.14 0.18 12 4.32 79.56 41 6.57 Yes 28 1.03 Yes 35 0.51 Yes -35 0.66 No 35 76.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 75489587 - NM_014381 MLH3 1 1.74 0.6 34 -1.39 0 19 4.23 No 14 1.23 Yes 0 0 No -26 0.47 No 44 53.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75497356 - NM_014381 MLH3 1 2.98 0.76 33 7 89.42 16 6 Yes 3 0.36 No 0 0 No -30 0.75 Yes 40 60.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75497419 - NM_014381 MLH3 1 8.75 2.51 68 5.97 81.06 33 5.92 Yes 20 0.06 No 28 0.6 Yes -28 0.77 Yes 42 80.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75497419 - NM_014381 MLH3 1 0.57 0.19 10 5.97 81.06 33 5.92 Yes 20 0.06 No 28 0.6 Yes -28 0.77 Yes 42 80.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 75500194 - NM_014381 MLH3 1 265.52 15.39 72 9.37 83.6 20 5.4 No 66 0.46 No 19 0.61 Yes -26 0.62 No 51 79.51 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 75500194 - NM_014381 MLH3 1 4.01 0.21 11 9.37 83.6 20 5.4 No 66 0.46 No 19 0.61 Yes -26 0.62 No 51 79.51 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 75500892 - NM_014381 MLH3 1 4.38 0.15 10 10.01 85.05 22 6.62 Yes 9 1.37 Yes 0 0 No -21 0.59 No 49 57.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75506728 - NM_014381 MLH3 1 1.84 0.35 21 -7.28 71.53 37 7.76 Yes 47 1.24 Yes 26 0.28 Yes -24 0.65 No 34 74.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 75509202 - NM_014381 MLH3 1 0.37 0.15 9 6.94 80.95 16 4.52 No 31 0.28 No 23 0.4 Yes -21 0.46 No 49 55.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 75513293 - NM_014381 MLH3 1 2.76 0.24 17 4.71 83.91 24 5.91 Yes 11 0.55 No 0 0 No -23 0.86 Yes 47 94.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 74707849 - NM_152649 MLKL 1 4.86 1.47 56 11.15 88.27 27 9.15 Yes 62 0.73 No 0 0 No -26 0.92 Yes 44 95.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 74710324 - NM_152649 MLKL 1 2.21 0.72 39 10.16 71.52 34 5.01 No 21 1.08 Yes 25 0.9 Yes -33 0.72 Yes 37 63.01 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 6222957 - NM_005934 MLLT1 1 0.1 0.11 8 7.03 85.32 32 6.62 Yes 19 2.12 Yes 0 0 No -27 0.87 Yes 43 86.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 21830191 + NM_001324297 MLLT10 1 3.71 0.19 12 7.33 88.99 25 5.2 No 38 0.36 No 24 0.88 Yes -24 0.69 Yes 46 60.58 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 21838072 + NM_001324297 MLLT10 1 8.23 0.42 26 11.22 88.27 27 6.12 Yes 14 0.6 No 0 0 No -26 0.96 Yes 44 96.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 21838611 + NM_001324297 MLLT10 1 5.49 0.26 16 -2.5 84.41 38 6.11 Yes 25 2 Yes 0 0 No -37 0.57 No 33 70.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 21838613 + NM_001324297 MLLT10 1 4.39 0.17 7 -3.44 83.13 40 6.26 Yes 27 1.99 Yes 0 0 No -39 0.58 No 31 70.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 21845571 + NM_001324297 MLLT10 1 303.69 14.24 72 9.75 87.43 30 4.82 No 0 0.56 No 29 0.57 Yes -29 0.49 No 44 38.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 21845928 + NM_001324297 MLLT10 1 3.93 0.21 10 9.87 97.1 42 7.27 Yes 13 1.45 Yes 0 0 No -25 0.72 Yes 45 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 21877022 + NM_001324297 MLLT10 1 0.53 0.19 10 7.69 82.58 44 7.03 Yes 53 1.27 Yes 0 0 No -43 0.79 Yes 27 78.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 21879052 + NM_001324297 MLLT10 1 0.89 0.26 12 8.12 86.16 30 7.48 Yes 17 1.61 Yes 0 0 No -29 0.95 Yes 41 95.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 21962514 + NM_001324297 MLLT10 1 0.3 0.15 9 5.05 86.07 17 3.65 No 24 0.89 Yes 0 0 No -22 0.91 Yes 48 82.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 21962569 + NM_001324297 MLLT10 1 1.17 0.57 28 2.16 0 19 4.47 No 6 0.93 Yes 18 0.71 Yes -18 0.88 Yes 52 76.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 21962572 + NM_001324297 MLLT10 1 0.48 0.24 14 3.77 88.17 22 4.8 No 9 0.92 Yes 0 0 No -21 0.9 Yes 49 73.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 21962710 + NM_001324297 MLLT10 1 3.1 1.56 51 6.59 85.54 25 5.29 No -3 1.13 Yes 0 0 No -24 0.86 Yes 46 67.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 21977419 + NM_001324297 MLLT10 1 2.75 0.22 12 6.95 85.01 20 3.67 No 76 0.61 No 25 0.68 Yes -25 0.65 No 51 55.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 21977419 + NM_001324297 MLLT10 1 62.59 7.78 72 6.95 85.01 20 3.67 No 76 0.61 No 25 0.68 Yes -25 0.65 No 51 55.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 21977423 + NM_001324297 MLLT10 1 0.63 0.11 8 3.07 0 24 3.96 No 17 0.32 No 0 0 No -23 0.56 No 47 68.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 21979836 + NM_001324297 MLLT10 1 0.98 0.14 7 5.19 87.99 26 6.54 Yes 13 1.57 Yes 0 0 No -25 0.87 Yes 45 88.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22012878 + NM_001324297 MLLT10 1 0.26 0.14 9 5.01 79.77 62 8.75 Yes 49 1.15 Yes 0 0 No -23 0.92 Yes 47 75.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22021833 + NM_001324297 MLLT10 1 0.28 0.13 7 0.36 0 15 3.76 No 39 0.53 No 0 0 No -29 0.67 Yes 41 30.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 22024075 + NM_001324297 MLLT10 1 0.58 0.24 14 1.78 0 18 4.12 No 8 0.85 Yes 0 0 No -29 0.41 No 40 43.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 22029082 + NM_001324297 MLLT10 1 7.59 2.26 61 8.24 89.04 17 6.13 Yes 4 0.25 No 32 0.23 Yes -25 0.32 No 51 56.11 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 151039698 + NM_006818 MLLT11 1 1.94 1.04 40 -1.72 0 24 5.2 No 11 1.08 Yes 0 0 No -23 0.92 Yes 47 94.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151039747 + NM_006818 MLLT11 1 0.22 0.13 9 1.32 86.79 26 5.2 No 60 1.08 Yes 0 0 No -20 0.66 No 48 72.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 20415549 - NM_001286691 MLLT3 1 0.36 0.33 17 8.48 82.17 37 6.74 Yes 69 -4.11 No 0 0 No -27 0.57 No 43 70.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 20452853 - NM_001286691 MLLT3 1 0.11 0.13 9 10.9 84.62 26 7.72 Yes 13 1.09 Yes 0 0 No -25 0.86 Yes 45 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 20455689 - NM_001286691 MLLT3 1 0.63 0.85 35 9.31 93.79 34 7.51 Yes 21 0.69 No 0 0 No -33 0.67 Yes 37 83.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 36863222 + NM_005937 MLLT6 1 1.07 1.5 55 4.81 77.51 23 5.23 No 32 1.23 Yes 0 0 No -22 0.76 Yes 48 71.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36865397 + NM_005937 MLLT6 1 0.13 0.15 11 -8.07 70.12 18 4.56 No 58 -3.98 No 27 0.45 Yes -18 0.46 No 52 45.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 36865707 + NM_005937 MLLT6 1 0.11 0.15 9 4.86 75.91 20 5.53 No 42 -2.85 No 20 0.88 Yes -19 0.91 Yes 51 95.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 36866306 + NM_005937 MLLT6 1 1.31 1.44 49 9.28 83.14 28 4.71 No 1 0.69 No 0 0 No -27 0.89 Yes 43 94.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 36868102 + NM_005937 MLLT6 1 0.65 0.72 38 -2.8 71.63 43 4.95 No 6 0.55 No 0 0 No -28 0.81 Yes 42 83.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 36872440 + NM_005937 MLLT6 1 0.22 0.25 16 10.35 94.03 23 5.74 Yes 65 1.34 Yes 0 0 No -26 0.64 No 48 65.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 36872736 + NM_005937 MLLT6 1 0.13 0.13 8 8.16 85.29 21 5.2 No 8 0.79 Yes 0 0 No -20 0.89 Yes 50 91.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36874247 + NM_005937 MLLT6 1 0.89 1.03 42 11.51 83.43 27 7.02 Yes 14 1.64 Yes 0 0 No -26 0.81 Yes 44 78.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36875492 + NM_005937 MLLT6 1 0.35 0.4 23 2.64 72.65 26 5.35 No 13 0.91 Yes 0 0 No -25 0.87 Yes 45 87.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36875771 + NM_005937 MLLT6 1 0.32 0.38 20 -5.73 73.92 27 5.29 No 14 2.04 Yes 0 0 No -26 0.87 Yes 44 93.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36875775 + NM_005937 MLLT6 1 0.18 0.19 12 -6.88 0 9 3.67 No 18 2.03 Yes 0 0 No -30 0.87 Yes 40 86.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36878938 + NM_005937 MLLT6 1 0.21 0.18 12 2.22 0 11 3.5 No 72 -1.48 No 0 0 No -53 0.63 No 17 84.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 2256061 + NM_001199174 MLST8 1 7.7 1.58 51 4.55 79.46 23 6.23 Yes 10 2.34 Yes 22 0.94 Yes -22 0.83 Yes 48 86.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2256361 + NM_001199174 MLST8 1 6.39 5.74 70 0.26 0 14 4.23 No 28 0.54 No 37 0.67 Yes -13 0.65 No 57 75.56 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 2256479 + NM_001199174 MLST8 1 4.76 5.36 68 -10.17 0 9 3.74 No 48 0.97 Yes 18 0.89 Yes -15 0.45 No 24 36.47 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 2256484 + NM_001199174 MLST8 1 0.87 0.97 41 -7.34 0 14 4.35 No 53 0.97 Yes 18 0.89 Yes -20 0.48 No 57 33.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 2256723 + NM_001199174 MLST8 1 0.1 0.11 7 -0.63 0 20 4.36 No 53 -4.13 No 22 0.63 Yes -39 0.7 Yes 58 16.87 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 2256743 + NM_001199174 MLST8 1 0.67 0.81 37 3.04 87.51 23 5.39 No 73 -4.19 No 22 0.63 Yes -22 0.69 Yes 48 79.12 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2257197 + NM_001199174 MLST8 1 1.79 1.58 53 0.43 0 23 7.28 Yes 10 1.53 Yes 18 0.81 Yes -22 0.93 Yes 48 93.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2257857 + NM_001199174 MLST8 1 0.11 0.1 7 4.64 81.78 32 6.6 Yes 5 1.34 Yes 31 0.9 Yes -31 0.88 Yes 39 85.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2257923 + NM_001199174 MLST8 1 0.24 0.28 16 8.96 79.66 16 5.22 No 71 1.35 Yes 0 0 No -35 0.34 No 46 59.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40720735 + NM_170607 MLX 1 0.06 0.1 7 1.34 65.24 30 6.55 Yes 17 1.64 Yes 0 0 No -29 0.97 Yes 41 97.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40720880 + NM_170607 MLX 1 0.23 0.33 21 1.23 78.94 21 3.59 No 44 1.22 Yes 0 0 No -20 0.68 Yes 14 58.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 40721186 + NM_170607 MLX 1 0.3 0.42 25 7.96 92.82 39 6.4 Yes 52 -1.93 No 30 0.73 Yes -38 0.62 No 32 69.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 40722114 + NM_170607 MLX 1 0.15 0.32 21 6.78 84.53 19 5.35 No 59 -3.32 No 26 0.87 Yes -26 0.89 Yes 44 69.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 122616854 + NM_014938 MLXIP 1 1.34 0.33 16 7.43 81.91 19 5 No 35 0.89 Yes 0 0 No -18 0.72 Yes 52 71.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122619782 + NM_014938 MLXIP 1 2.47 0.35 22 4.96 0 20 4.58 No 22 0.91 Yes 0 0 No -22 0.82 Yes 48 88.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122622737 + NM_014938 MLXIP 1 6.54 0.79 37 -0.9 0 18 4.58 No 5 0.07 No 21 0.9 Yes -17 0.81 Yes 53 85.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 122622994 + NM_014938 MLXIP 1 0.66 0.11 8 3.81 79.27 18 5.29 No 73 -2.23 No 0 0 No -26 0.68 Yes 53 66.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 122625373 + NM_014938 MLXIP 1 1.8 0.28 17 10.12 85.04 26 5.48 No 54 -1.13 No 25 0.57 Yes -25 0.64 No 45 61.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 83945754 + NM_012213 MLYCD 1 1.28 0.51 26 4.97 86.88 22 5.29 No 9 0.55 No 0 0 No -21 0.9 Yes 49 81.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 146560969 + NM_172250 MMAA 1 0.23 0.13 7 -3.22 73.85 25 5.09 No 12 0.07 No 0 0 No -24 0.48 No 46 63.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 109999657 - NR_038118 MMAB 1 0.07 0.11 8 -11.5 0 27 5.22 No 14 1.39 Yes 0 0 No -26 0.89 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 110005403 - NR_038118 MMAB 1 0.22 0.43 23 6.55 83.83 27 7.41 Yes 14 1.32 Yes 0 0 No -26 0.86 Yes 44 76.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110006199 - NR_038118 MMAB 1 0.06 0.13 7 0.94 75.56 21 6.18 Yes 8 1.42 Yes 0 0 No -20 0.55 No 38 65.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 110006446 - NR_038118 MMAB 1 0.25 0.49 24 4.97 79.51 13 4.45 No 0 0.79 Yes 0 0 No -23 0.83 Yes 47 82.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 110007903 - NR_038118 MMAB 1 0.12 0.15 10 6.63 85.02 18 6.95 Yes 5 1.16 Yes 20 0.59 Yes -17 0.4 No 53 58.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 150426682 - NM_015702 MMADHC 1 0.03 0.26 18 -11.85 0 31 5.8 Yes 18 1.35 Yes 0 0 No -30 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 150428846 - NM_015702 MMADHC 1 0.06 0.38 20 0.55 84.41 18 6.48 Yes 5 0.75 No 30 0.24 Yes -30 0.65 No 40 77.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 150438809 - NM_015702 MMADHC 1 0.04 0.21 13 -4.3 0 18 4.18 No 11 0.75 No 29 0.21 Yes -29 0.38 No 47 39.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 150441383 - NM_015702 MMADHC 1 0.1 0.46 23 4.57 80.12 27 7.62 Yes 14 1.48 Yes 0 0 No -26 0.96 Yes 44 96.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 150441386 - NM_015702 MMADHC 1 0.96 4.36 70 5.62 85.02 24 7.42 Yes 11 1.51 Yes 0 0 No -23 0.96 Yes 47 96.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 53479665 - NM_012329 MMD 1 4.54 4.89 70 9.85 81.95 18 6.15 Yes 5 0.41 No 0 0 No -25 0.24 No 45 44.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 53481909 - NM_012329 MMD 1 17.98 17.14 72 7.01 87.37 26 7.34 Yes 13 0.48 No 0 0 No -25 0.87 Yes 45 90.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 53485177 - NM_012329 MMD 1 1.06 0.75 28 1.54 0 36 8.69 Yes 23 1.55 Yes 0 0 No -35 0.91 Yes 35 95.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 53494014 - NM_012329 MMD 1 0.41 0.39 23 11.62 87.26 32 6.11 Yes 19 0.65 No 0 0 No -27 0.67 Yes 43 89.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 53497895 - NM_012329 MMD 1 8.3 8.1 70 8.89 82.89 74 8.78 Yes 21 2.08 Yes 22 0.93 Yes -22 0.87 Yes 48 90.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 135047903 - NM_001330000 MMGT1 1 0.11 0.11 7 8.56 83.39 28 5.48 No 15 0.19 No 0 0 No -27 0.75 Yes 43 63.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 135049649 - NM_001330000 MMGT1 1 0.43 0.29 17 -0.06 0 35 4.37 No 33 1.09 Yes 0 0 No -30 0.7 Yes 40 57.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 135049677 - NM_001330000 MMGT1 1 0.14 0.13 7 5.63 78.47 18 6.16 Yes 5 1.09 Yes 30 0.67 Yes -23 0.85 Yes 47 78.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 135053246 - NM_001330000 MMGT1 1 0.2 0.18 11 4.27 74.34 29 5.74 Yes 34 0.72 No 0 0 No -28 0.82 Yes 42 94.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 99219233 - NM_001289405 MMS19 1 0.8 0.83 37 5.96 73.37 15 6.24 Yes 75 1 Yes 0 0 No -53 0.62 No 56 58.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 99219263 - NM_001289405 MMS19 1 2.17 2.22 64 -2.34 79.85 24 5.48 No 45 1.01 Yes 23 0.89 Yes -23 0.83 Yes 47 75.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 99219517 - NM_001289405 MMS19 1 0.63 0.69 37 3.14 76.18 21 5.19 No 59 1.58 Yes 20 0.87 Yes -20 0.52 No 50 68.04 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 99220760 - NM_001289405 MMS19 1 0.24 0.24 15 1.57 0 34 5.73 Yes 60 0.39 No 0 0 No -28 0.88 Yes 42 91.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 99221391 - NM_001289405 MMS19 1 0.52 0.63 38 3.47 76.65 31 6 Yes 66 1.2 Yes 19 0.59 Yes -30 0.86 Yes 40 84.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 99221483 - NM_001289405 MMS19 1 0.18 0.22 13 8.49 83.77 22 5.55 No 9 1.42 Yes 0 0 No -26 0.72 Yes 44 82.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 99221955 - NM_001289405 MMS19 1 0.15 0.19 9 5.88 69.22 47 6.14 Yes 56 0.5 No 0 0 No -27 0.93 Yes 43 79.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 99222435 - NM_001289405 MMS19 1 0.14 0.17 9 -3.8 0 78 8.92 Yes 65 1.27 Yes 0 0 No -33 0.7 Yes 37 69.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 99225914 - NM_001289405 MMS19 1 18.77 18.76 72 5.28 82.31 34 5.15 No 21 0.83 Yes 30 0.89 Yes -22 0.7 Yes 37 83.94 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 99226326 - NM_001289405 MMS19 1 0.32 0.26 19 -4.29 79.97 25 5.1 No 12 1.21 Yes 0 0 No -24 0.94 Yes 46 91.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 99227361 - NM_001289405 MMS19 1 1.47 1.18 46 4.67 81.68 30 5.91 Yes 7 0.12 No 29 0.63 Yes -29 0.69 Yes 41 47.72 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 99228884 - NM_001289405 MMS19 1 2.84 2.46 61 -2.32 68.7 11 4.8 No 59 1.53 Yes 27 0.9 Yes -25 0.67 Yes 60 57.94 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 99229306 - NM_001289405 MMS19 1 1.45 1.26 51 12.62 90.19 35 7.14 Yes 22 0.95 Yes 0 0 No -30 0.7 Yes 40 72.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 99229496 - NM_001289405 MMS19 1 0.12 0.14 10 -1.63 66.53 24 5.44 No 54 -4.38 No 22 0.95 Yes -23 0.88 Yes 47 40.48 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 99229960 - NM_001289405 MMS19 1 0.1 0.13 9 -10.64 0 25 3.56 No 34 1.65 Yes 0 0 No -24 0.88 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 99230637 - NM_001289405 MMS19 1 0.41 0.51 28 4.37 64.51 22 5.32 No 75 0.66 No 22 0.57 Yes -21 0.7 Yes 38 50.61 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 99237162 - NM_001289405 MMS19 1 3.98 4.93 70 5.27 0 22 4.25 No 24 0.82 Yes 24 0.89 Yes -36 0.73 Yes 34 82.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 99240115 - NM_001289405 MMS19 1 2.59 2.94 58 7.94 88.85 52 6.09 Yes 62 -1.72 No 32 0.05 Yes -45 0.93 Yes 25 93.75 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 97613216 - NM_198468 MMS22L 1 3.42 1.58 55 6.82 77.23 15 5.2 No 54 -2.52 No 0 0 No -22 0.48 No 50 83.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 97613234 - NM_198468 MMS22L 1 0.68 0.28 16 3.73 82.76 28 5.28 No 36 -2.57 No 0 0 No -27 0.92 Yes 43 84.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 97627389 - NM_198468 MMS22L 1 1.34 0.67 36 3.44 79.01 25 5.13 No 12 0.29 No 0 0 No -24 0.97 Yes 46 98.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 97629916 - NM_198468 MMS22L 1 0.2 0.11 8 1.24 79.91 23 4.9 No 32 1.39 Yes 0 0 No -22 0.69 Yes 42 47.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 97642315 - NM_198468 MMS22L 1 2.12 0.97 42 9.97 84.18 20 4.34 No 47 1.1 Yes 0 0 No -22 0.76 Yes 48 89.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 97677484 - NM_198468 MMS22L 1 0.45 0.18 11 9.43 90.61 22 6 Yes 9 0.81 Yes 0 0 No -21 0.68 Yes 49 57.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 97681869 - NM_198468 MMS22L 1 0.72 0.29 16 7.71 80.01 19 5.8 Yes 6 0.61 No 22 0.7 Yes -22 0.43 No 52 50.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 97688999 - NM_198468 MMS22L 1 0.27 0.17 8 4.98 81.65 14 4.12 No 48 -3.96 No 0 0 No -29 0.63 No 41 83.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 97692326 - NM_198468 MMS22L 1 0.25 0.17 9 4.81 81.12 27 6.47 Yes 14 1.33 Yes 0 0 No -26 0.78 Yes 44 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 97699956 - NM_198468 MMS22L 1 0.44 0.18 12 4.56 84.41 32 5.17 No 24 1.56 Yes 0 0 No -31 0.48 No 39 77.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 97700518 - NM_198468 MMS22L 1 0.84 0.4 20 4.74 84.41 37 6.24 Yes 49 -2.85 No 0 0 No -22 0.76 Yes 48 87.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 97707546 - NM_198468 MMS22L 1 1.82 1.24 44 6.03 75.03 29 5.8 Yes 10 -2.53 No 22 0.65 Yes -22 0.35 No 48 63.5 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 97708938 - NM_198468 MMS22L 1 0.42 0.32 16 2.61 0 18 4.47 No 5 0.43 No 0 0 No -17 0.75 Yes 53 80.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 97709851 - NM_198468 MMS22L 1 0.3 0.18 11 9.59 79.82 35 6.7 Yes 56 1.77 Yes 34 0.24 Yes -34 0.48 No 36 56.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 97710055 - NM_198468 MMS22L 1 1.42 0.89 39 7.14 90.88 31 6.41 Yes 3 0.28 No 0 0 No -29 0.78 Yes 40 63.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 97711996 - NM_198468 MMS22L 1 0.43 0.19 13 8 94.64 24 5.2 No 46 0.85 Yes 0 0 No -23 0.75 Yes 47 89.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 97718160 - NM_198468 MMS22L 1 1.58 1.36 50 9.63 86.62 25 7.32 Yes 12 0.15 No 25 0.61 Yes -24 0.79 Yes 46 60.06 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 97718160 - NM_198468 MMS22L 1 0.24 0.21 13 9.63 86.62 25 7.32 Yes 12 0.15 No 25 0.61 Yes -24 0.79 Yes 46 60.06 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 61220270 + NM_001177963 MNAT1 1 1.76 1.5 51 8.44 95.03 25 4.9 No 35 0.3 No 22 0.33 Yes -17 0.51 No 48 71.41 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 61258332 + NM_001177963 MNAT1 1 0.59 0.57 27 6.81 78.32 18 5.21 No 5 1.18 Yes 0 0 No -23 0.51 No 47 41.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 61265976 + NM_001177963 MNAT1 1 0.66 0.94 43 3.77 71.63 25 6.31 Yes 44 0.12 No 0 0 No -24 0.96 Yes 46 97.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 61266674 + NM_001177963 MNAT1 1 0.11 0.14 9 -0.45 0 19 3.98 No 27 0.56 No 0 0 No -18 0.83 Yes 31 71.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 61429720 + NM_001177963 MNAT1 1 0.33 0.19 13 9.71 83.92 36 5.46 No 23 0.18 No 0 0 No -38 0.56 No 42 81.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 61431437 + NM_001177963 MNAT1 1 0.18 0.13 8 7.1 84.92 30 5.84 Yes 17 1.06 Yes 0 0 No -29 0.85 Yes 41 93.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 61435276 + NM_001177963 MNAT1 1 4.7 2.94 64 8.5 91.36 22 7.17 Yes 9 0.54 No 28 0.59 Yes -28 0.42 No 49 39.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 154272585 + NR_045605 MND1 1 0.27 0.19 11 8.56 86.44 40 7.54 Yes 31 1.11 Yes 0 0 No -30 0.68 Yes 40 76.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 154276809 + NR_045605 MND1 1 0.66 0.46 22 -6.84 0 44 7.61 Yes 31 0.22 No 0 0 No -43 0.36 No 30 58.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 154317061 + NR_045605 MND1 1 0.21 0.21 12 9.86 81.85 32 9.05 Yes 55 2.24 Yes 0 0 No -31 0.91 Yes 39 86.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 158804043 + NM_002432 MNDA 1 0.23 0.17 11 3.97 84.41 28 4.5 No 24 0.59 No 0 0 No -27 0.79 Yes 43 79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74385899 - NM_001317110 MOB1A 1 1.86 14.28 72 4.19 0 38 5.86 Yes 68 -1.32 No 0 0 No -29 0.65 No 41 67.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 74385903 - NM_001317110 MOB1A 1 0.13 1 45 2.3 84.41 34 5.58 Yes 64 -1.31 No 0 0 No -25 0.67 Yes 45 66.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 74389606 - NM_001317110 MOB1A 1 0.03 0.28 12 -0.31 84.41 43 6.2 Yes 30 1.25 Yes 0 0 No -29 0.88 Yes 41 88.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74392477 - NM_001317110 MOB1A 1 0.03 0.36 20 -9.85 0 21 5.25 No 8 0.81 Yes 0 0 No -27 0.83 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 74392499 - NM_001317110 MOB1A 1 0.01 0.18 9 1.47 60.81 70 8.76 Yes 67 1.03 Yes 25 0.88 Yes -22 0.72 Yes 38 54.88 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 74394187 - NM_001317110 MOB1A 1 0.02 0.15 9 3.91 74.52 34 6.07 Yes 59 0.86 Yes 0 0 No -33 0.51 No 37 60.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 74394266 - NM_001317110 MOB1A 1 0.09 0.82 41 7.47 85.51 20 5.62 Yes 7 0.86 Yes 23 0.82 Yes -32 0.73 Yes 44 50.8 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 74395753 - NM_001317110 MOB1A 1 0.01 0.14 9 3.23 0 33 6.7 Yes 20 1.31 Yes 0 0 No -32 0.84 Yes 38 84.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74395757 - NM_001317110 MOB1A 1 0.05 0.49 22 0.45 83 29 6.4 Yes 16 1.33 Yes 0 0 No -28 0.82 Yes 42 85.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74399880 - NM_001317110 MOB1A 1 4316.47 902.53 72 7.73 91.57 27 5.36 No 58 0.46 No 26 0.83 Yes -26 0.88 Yes 44 87.42 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 74405409 - NM_001317110 MOB1A 1 27.76 5.88 71 6.97 80.99 20 6.82 Yes 7 0.9 Yes 20 0.86 Yes -20 0.66 Yes 50 66.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 71825620 + NM_001244766 MOB1B 1 0.95 0.51 27 1.08 83.95 35 7.33 Yes 22 1.56 Yes 0 0 No -34 0.94 Yes 36 95.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 71846710 + NM_001244766 MOB1B 1 0.33 0.17 10 5.5 84.31 18 5.11 No 5 1.15 Yes 0 0 No -17 0.77 Yes 53 88.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 71846715 + NM_001244766 MOB1B 1 0.18 0.11 7 3.59 0 23 5.38 No 10 1.12 Yes 0 0 No -22 0.94 Yes 48 95.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 1491715 - NM_001172223 MOB2 1 4.78 2.64 63 2.77 0 24 6.16 Yes 11 -0.42 No 0 0 No -23 0.9 Yes 47 84.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 1492646 - NM_001172223 MOB2 1 1.64 0.72 39 2 0 26 7 Yes 13 2.32 Yes 0 0 No -25 0.93 Yes 45 92.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2073420 - NM_130807 MOB3A 1 0.07 0.39 24 -3.59 0 27 6.16 Yes 14 1.54 Yes 0 0 No -26 0.77 Yes 44 88.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2077687 - NM_130807 MOB3A 1 0.12 0.67 33 2.08 70.39 27 6.84 Yes 14 1.7 Yes 0 0 No -26 0.79 Yes 44 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2077690 - NM_130807 MOB3A 1 0.19 1.11 40 5.53 70.81 24 6.68 Yes 11 1.72 Yes 0 0 No -23 0.78 Yes 47 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2080751 - NM_130807 MOB3A 1 0.16 0.71 33 1.9 76.34 27 6.24 Yes 53 0.39 No 0 0 No -32 0.61 No 38 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 2080781 - NM_130807 MOB3A 1 0.03 0.11 7 4.86 81.86 20 5.1 No 23 0.41 No 0 0 No -19 0.55 No 53 70.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 2085325 - NM_130807 MOB3A 1 1.92 0.72 35 2.76 75.52 21 5.97 Yes 8 0.92 Yes 29 0.75 Yes -25 0.76 Yes 45 82.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 27330611 - NM_024761 MOB3B 1 0.54 0.13 7 -0.5 0 31 6.9 Yes 18 2.26 Yes 0 0 No -30 0.8 Yes 40 91.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 52396318 - NM_004531 MOCS2 1 0.19 0.14 10 5.29 80.74 20 5.21 No 63 1.05 Yes 26 0.54 Yes -22 0.5 No 48 64.48 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 74690459 - NM_001146158 MOGS 1 0.15 0.21 14 6.57 75.15 51 5.48 No 38 0.92 Yes 0 0 No -50 0.6 No 20 73.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 74690459 - NM_001146158 MOGS 1 0.24 0.32 17 6.57 75.15 51 5.48 No 38 0.92 Yes 0 0 No -50 0.6 No 20 73.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 49948426 - NM_032355 MON1A 1 1.2 0.25 15 5.5 79.01 45 5.63 Yes 22 -3.02 No 0 0 No -28 0.52 No 42 57.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 49948426 - NM_032355 MON1A 1 0.7 0.13 8 5.5 79.01 45 5.63 Yes 22 -3.02 No 0 0 No -28 0.52 No 42 57.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 77225327 + NM_014940 MON1B 1 0.17 0.18 13 -1.24 0 13 4.24 No 8 0.42 No 0 0 No -20 0.51 No 50 53.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 77225382 + NM_014940 MON1B 1 0.4 0.4 24 -2.49 0 13 4.33 No 32 1.38 Yes 0 0 No -34 0.86 Yes 26 81.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 77227333 + NM_014940 MON1B 1 0.16 0.18 11 0.3 0 21 4.44 No -3 0.22 No 20 0.85 Yes -20 0.92 Yes 50 65.09 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 77227640 + NM_014940 MON1B 1 0.13 0.15 9 7.78 88.37 25 7.37 Yes 12 1.06 Yes 0 0 No -24 0.55 No 46 65.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 77228233 + NM_014940 MON1B 1 0.4 0.35 16 1.06 83.16 43 5.3 No 7 1.37 Yes 0 0 No -42 0.42 No 28 76.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 77228831 + NM_014940 MON1B 1 0.17 0.15 9 -1.22 59.06 79 11.13 Yes 66 1.67 Yes 0 0 No -40 0.64 No 30 48.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 62883815 + NM_001278472 MON2 1 1.44 1.74 59 9.09 98.88 16 5.26 No 3 0.72 No 26 0.43 Yes -21 0.49 No 49 77.08 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 62893990 + NM_001278472 MON2 1 0.15 0.19 10 10.32 100 20 5.1 No 46 1.38 Yes 0 0 No -19 0.89 Yes 51 92.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 62912416 + NM_001278472 MON2 1 1.41 0.99 44 1.46 64.57 49 7.33 Yes 19 1.45 Yes 0 0 No -31 0.44 No 39 70.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 62928628 + NM_001278472 MON2 1 0.52 0.46 24 -0.91 0 31 6.19 Yes 65 -4.86 No 0 0 No -30 0.44 No 40 47.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 62929309 + NM_001278472 MON2 1 2.66 2.85 67 2.76 0 36 5.2 No 10 0.12 No 0 0 No -26 0.51 No 35 50.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 62930911 + NM_001278472 MON2 1 0.22 0.29 17 6.43 85.33 34 5.62 Yes 32 0.45 No 25 0.61 Yes -28 0.57 No 42 35.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 62948462 + NM_001278472 MON2 1 0.39 0.36 21 7.59 87.11 23 5.82 Yes 10 0.9 Yes 0 0 No -22 0.92 Yes 48 95.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 62949796 + NM_001278472 MON2 1 0.58 0.54 25 3.86 75.17 33 5.64 Yes 63 -2.98 No 0 0 No -25 0.76 Yes 45 68.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 62965251 + NM_001278472 MON2 1 0.08 0.11 7 7.99 86.45 22 5 No 50 0.37 No 0 0 No -21 0.75 Yes 49 72.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 62967913 + NM_001278472 MON2 1 2.16 1.42 48 7.09 89.53 54 7.94 Yes 41 1.72 Yes 0 0 No -31 0.36 No 45 32.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 62982635 + NM_001278472 MON2 1 0.38 0.46 22 6.14 84.61 54 9.28 Yes 46 1.08 Yes 26 0.87 Yes -26 0.82 Yes 44 67.99 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 62986343 + NM_001278472 MON2 1 0.11 0.11 7 3.26 78.01 28 5.88 Yes 15 0.9 Yes 24 0.69 Yes -35 0.6 No 35 73.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 31331054 - NM_014941 MORC2 1 0.27 0.15 9 7.04 72.04 30 5.74 Yes 64 0.35 No 0 0 No -26 0.78 Yes 44 68.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 31332647 - NM_014941 MORC2 1 0.39 0.15 10 2.44 68.38 34 6.32 Yes 61 -1.82 No 26 0.23 Yes -33 0.68 Yes 37 68.12 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 31334103 - NM_014941 MORC2 1 0.8 0.39 23 5.31 68.6 66 8.53 Yes 53 0.75 No 0 0 No -25 0.58 No 45 58.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 31346447 - NM_014941 MORC2 1 2.5 1.18 55 -3.93 0 19 4.24 No 76 1.83 Yes 22 0.83 Yes -50 0.49 No 20 54.74 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 31346456 - NM_014941 MORC2 1 1.7 0.93 37 -2.51 60.25 42 6.47 Yes 67 1.84 Yes 22 0.83 Yes -41 0.49 No 29 81.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 37715771 + NM_001320446 MORC3 1 0.29 0.22 15 3.01 0 38 7.68 Yes 25 2.35 Yes 0 0 No -37 0.74 Yes 33 91.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 37721671 + NM_001320446 MORC3 1 1.17 0.31 16 -11.93 0 12 3.35 No 71 1.4 Yes 0 0 No -12 0.68 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 37721681 + NM_001320446 MORC3 1 0.37 0.1 7 -2.67 56.84 22 4.17 No 18 0.61 No 0 0 No -22 0.63 No 48 38.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 37732786 + NM_001320446 MORC3 1 0.26 0.15 9 -3.29 0 72 9.72 Yes 32 0.44 No 0 0 No -38 0.59 No 32 51.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 37736453 + NM_001320446 MORC3 1 0.48 0.29 13 6.69 84.43 26 4.56 No 41 1.38 Yes 0 0 No -25 0.92 Yes 45 55.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 37743151 + NM_001320446 MORC3 1 0.57 0.17 12 5.87 82.69 20 7.07 Yes 7 1.27 Yes 0 0 No -19 0.83 Yes 51 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 79174179 + NM_001265604 MORF4L1 1 0.01 0.14 9 4.61 77.35 29 5.46 No 16 0.82 Yes 0 0 No -24 0.61 No 42 73.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 79177308 + NM_001265604 MORF4L1 1 0.89 11.68 72 6.52 78.19 32 5.34 No 19 0.75 No 31 0.65 Yes -31 0.61 No 39 69.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 79177311 + NM_001265604 MORF4L1 1 0.03 0.44 25 0.77 66.25 35 5.54 No 22 0.75 No 31 0.65 Yes -34 0.57 No 36 75.25 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 79178485 + NM_001265604 MORF4L1 1 0.76 10.11 72 -0.93 0 21 5.71 Yes 8 1.15 Yes 0 0 No -27 0.38 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 79178692 + NM_001265604 MORF4L1 1 0.11 1.08 43 6.51 81.6 45 5.16 No 6 0.1 No 0 0 No -24 0.67 Yes 44 66.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 79179607 + NM_001265604 MORF4L1 1 0.05 0.46 26 -3.55 0 59 8.42 Yes 46 1.35 Yes 24 0.87 Yes -21 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 79183777 + NM_001265604 MORF4L1 1 0.01 0.11 7 4.48 86.86 22 4.99 No 16 0.3 No 0 0 No -21 0.84 Yes 49 77.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 79183801 + NM_001265604 MORF4L1 1 0.02 0.17 9 -18.59 0 16 4.23 No 40 0.29 No 30 0.9 Yes -28 0.39 No 42 47.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 79183819 + NM_001265604 MORF4L1 1 0.02 0.15 9 -3.53 0 25 5.13 No 12 0.6 No 30 0.9 Yes -24 0.79 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 79184556 + NM_001265604 MORF4L1 1 0.07 0.69 33 -6.51 83.26 27 6.47 Yes 66 0.92 Yes 0 0 No -26 0.86 Yes 44 87.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 79186387 + NM_001265604 MORF4L1 1 0.01 0.15 10 -3.8 0 22 5 No 64 0.87 Yes 33 0.54 Yes -21 0.9 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 79186512 + NM_001265604 MORF4L1 1 0.15 1.58 50 7.89 80.64 13 5.29 No 0 0.08 No 0 0 No -21 0.6 No 52 66.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 79189337 + NM_001265604 MORF4L1 1 0.14 1.6 58 -3.19 60.03 22 4.64 No 39 0.82 Yes 0 0 No -32 0.56 No 38 57.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 102931962 - NM_001142418 MORF4L2 1 0.05 0.24 12 -0.01 63.25 23 5.2 No 26 0.05 No 0 0 No -47 0.42 No 23 35.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 102933529 - NM_001142418 MORF4L2 1 197.4 74.83 72 12.08 87.4 28 5.39 No 59 1.04 Yes 27 0.85 Yes -27 0.9 Yes 43 93.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 102933529 - NM_001142418 MORF4L2 1 626.48 239.17 72 12.08 87.4 28 5.39 No 59 1.04 Yes 27 0.85 Yes -27 0.9 Yes 43 93.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 102933529 - NM_001142418 MORF4L2 1 0.88 0.28 17 12.08 87.4 28 5.39 No 59 1.04 Yes 27 0.85 Yes -27 0.9 Yes 43 93.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 102933549 - NM_001142418 MORF4L2 1 24.52 9.56 71 7.13 88.02 24 4.99 No 39 1.03 Yes 23 0.9 Yes -23 0.92 Yes 47 81.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 102933549 - NM_001142418 MORF4L2 1 51.52 19.93 72 7.13 88.02 24 4.99 No 39 1.03 Yes 23 0.9 Yes -23 0.92 Yes 47 81.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 102938926 - NM_001142418 MORF4L2 1 0.28 0.13 8 4.31 73.63 36 4.95 No 17 1.14 Yes 0 0 No -35 0.67 Yes 35 82.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 39107722 + NM_001145450 MORN2 1 0.79 0.19 10 6.54 84.99 25 6.16 Yes -4 0.64 No 24 0.71 Yes -24 0.75 Yes 46 77.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 134026915 - NM_019556 MOSPD1 1 0.96 0.24 12 1.72 0 39 6.41 Yes 26 1.38 Yes 0 0 No -29 0.58 No 41 56.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 134027280 - NM_019556 MOSPD1 1 1.59 0.32 19 10.79 90.68 28 5.39 No 19 0.32 No 0 0 No -27 0.55 No 39 55.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 134038889 - NM_019556 MOSPD1 1 3.52 1.26 47 12.46 95.65 23 6.68 Yes 44 0.55 No 0 0 No -23 0.59 No 48 72.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 134048329 - NM_019556 MOSPD1 1 1.15 0.35 21 7.93 84.92 18 4.7 No 5 1.1 Yes 0 0 No -21 0.81 Yes 49 71.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 14899026 + NM_152581 MOSPD2 1 0.76 0.18 11 9.37 83.71 15 6.14 Yes 59 1.04 Yes 0 0 No -26 0.53 No 44 36.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 14899984 + NM_152581 MOSPD2 1 1.82 0.44 26 6.72 85.1 22 4.91 No 9 0.36 No 0 0 No -21 0.63 No 49 59.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 14933555 + NM_152581 MOSPD2 1 1.93 0.53 27 9.83 91.46 14 7.96 Yes 1 1.4 Yes 20 0.86 Yes -20 0.78 Yes 50 82.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 14937927 + NM_152581 MOSPD2 1 1.97 0.67 33 7.04 86.29 51 7.42 Yes 38 1.3 Yes 0 0 No -26 0.77 Yes 44 62.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 100210786 + NM_023948 MOSPD3 1 1.13 0.15 9 2.89 71.77 14 4.8 No 1 0.27 No 32 0.19 Yes -18 0.62 No 52 49.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 100211129 + NM_023948 MOSPD3 1 2.21 0.53 31 3.86 74.19 27 6.24 Yes 52 0.9 Yes 26 0.88 Yes -26 0.83 Yes 44 88.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 113217453 + NM_001321324 MOV10 1 45.7 7.39 70 8.16 84.18 41 5.15 No 35 -1.77 No 25 0.78 Yes -34 0.61 No 36 68.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 113217475 + NM_001321324 MOV10 1 3.96 0.56 28 -0.14 0 15 3.87 No 57 -1.77 No 0 0 No -24 0.75 Yes 41 59.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 113217523 + NM_001321324 MOV10 1 1.53 0.22 12 6.39 72.59 44 4.18 No 25 0.03 No 0 0 No -31 0.52 No 33 55.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 113229587 + NM_001321324 MOV10 1 19.31 12.28 72 8.14 82.13 21 6.4 Yes 8 2.02 Yes 20 0.92 Yes -20 0.91 Yes 50 87.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 113232615 + NM_001321324 MOV10 1 0.09 0.11 8 8.76 75.03 55 7.22 Yes 42 -1.44 No 0 0 No -32 0.9 Yes 38 95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 113238092 + NM_001321324 MOV10 1 0.24 0.19 11 5.75 81.5 31 5.72 Yes 56 0.66 No 0 0 No -30 0.61 No 40 41.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 113241259 + NM_001321324 MOV10 1 0.7 0.63 32 8.94 86.48 27 5.41 No 14 0.28 No 26 0.85 Yes -26 0.92 Yes 44 93.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 113242079 + NM_001321324 MOV10 1 0.61 0.51 27 9.99 84.94 40 5.25 No 27 1.03 Yes 21 0.69 Yes -39 0.63 No 49 61.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 113242129 + NM_001321324 MOV10 1 0.16 0.13 9 7.19 85.94 17 4.31 No 14 0.76 No 0 0 No -26 0.91 Yes 44 86.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 113242284 + NM_001321324 MOV10 1 0.13 0.11 7 5.66 80.28 21 6.4 Yes 62 1.85 Yes 24 0.94 Yes -20 0.93 Yes 50 92.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 113243017 + NM_001321324 MOV10 1 0.21 0.19 9 -16.64 0 13 3.87 No 59 0.79 Yes 22 0.53 Yes -13 0.69 Yes 53 46.87 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 132647255 - NM_015529 MOXD1 1 0.24 0.15 10 4.81 69.87 30 5.37 No 55 0.68 No 0 0 No -29 0.83 Yes 41 81.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 132690214 - NM_015529 MOXD1 1 0.45 0.24 12 6.9 80.39 25 5.77 Yes 9 0.15 No 0 0 No -24 0.78 Yes 46 82.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 166779545 - NR_073093 MPC1 1 0.08 0.22 12 -6.41 0 12 3.87 No 66 1.02 Yes 0 0 No -24 0.79 Yes 18 47.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 166779551 - NR_073093 MPC1 1 2.28 5.94 71 1.8 74.99 19 4.57 No 60 1.02 Yes 0 0 No -18 0.61 No 24 54.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 167887596 - NM_015415 MPC2 1 0.1 0.4 24 -13.89 0 34 7.97 Yes 21 1.07 Yes 0 0 No -33 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7489012 + NM_001330073 MPDU1 1 0.12 0.14 7 4.84 73.08 22 5.19 No 40 -3.36 No 21 0.76 Yes -21 0.9 Yes 49 80.33 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7490216 + NM_001330073 MPDU1 1 1.25 0.18 12 11.69 76.76 29 5.66 Yes 16 0.75 No 28 0.94 Yes -28 0.93 Yes 42 86.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7489268 + NM_001330073 MPDU1 1 2.51 3.1 69 0.98 0 34 5.04 No 21 1.21 Yes 28 0.87 Yes -33 0.88 Yes 37 91.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7489973 + NM_001330073 MPDU1 1 5.02 15.21 72 11.93 84.21 28 5.48 No 44 -2.43 No 27 0.63 Yes -27 0.67 Yes 43 64.39 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 7490216 + NM_001330073 MPDU1 1 5.44 0.72 33 11.69 76.76 29 5.66 Yes 16 0.75 No 28 0.94 Yes -28 0.93 Yes 42 86.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7490487 + NM_001330073 MPDU1 1 0.84 0.11 7 2.81 0 12 4.24 No 11 1.1 Yes 23 0.76 Yes -23 0.64 No 47 86.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 133057 + NM_002434 MPG 1 0.08 0.15 11 -2.29 0 12 4 No 6 0.41 No 0 0 No -18 0.34 No 52 40.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 82183027 - NM_005792 MPHOSPH6 1 0.16 0.17 9 -7.01 0 9 4.58 No 61 0.93 Yes 26 0.82 Yes -42 0.52 No 43 50.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 82184943 - NM_005792 MPHOSPH6 1 0.19 0.21 10 8.17 94 18 4.9 No 17 0.33 No 0 0 No -29 0.25 No 41 64.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 82184958 - NM_005792 MPHOSPH6 1 0.33 0.31 17 4.61 65.87 46 7.44 Yes 17 0.28 No 29 0.59 Yes -45 0.34 No 25 45.42 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 82195919 - NM_005792 MPHOSPH6 1 0.26 0.19 11 6.5 65.94 28 5.83 Yes 15 0.34 No 27 0.72 Yes -27 0.68 Yes 39 71.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 82201203 - NM_005792 MPHOSPH6 1 0.25 0.1 7 6.8 75.28 39 4.88 No 19 1.31 Yes 21 0.71 Yes -31 0.63 No 39 76.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 20220584 + NM_017520 MPHOSPH8 1 0.16 0.22 12 -4.99 77.04 35 8.03 Yes 10 0.76 No 0 0 No -34 0.86 Yes 36 92.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 20234291 + NM_017520 MPHOSPH8 1 1.13 1.14 45 7.65 85.86 26 7.55 Yes 13 1.48 Yes 0 0 No -25 0.95 Yes 45 95.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20234721 + NM_017520 MPHOSPH8 1 0.62 0.6 31 8.52 84.51 29 6.45 Yes 16 1.25 Yes 0 0 No -28 0.78 Yes 42 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20235078 + NM_017520 MPHOSPH8 1 0.59 0.54 31 9.73 81.41 43 8.89 Yes 30 0.87 Yes 21 0.6 Yes -35 0.53 No 35 64.06 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 20236102 + NM_017520 MPHOSPH8 1 0.57 0.58 30 9.85 88.27 33 5.13 No 12 0.82 Yes 0 0 No -24 0.71 Yes 46 85.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20243672 + NM_017520 MPHOSPH8 1 0.1 0.11 8 12.16 100 22 7.45 Yes 37 0.56 No 0 0 No -29 0.58 No 41 85.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 20244979 + NM_017520 MPHOSPH8 1 24.95 15.89 72 7.88 85.05 22 4.91 No 73 1.47 Yes 21 0.62 Yes -21 0.44 No 49 73.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 20244983 + NM_017520 MPHOSPH8 1 2.59 1.69 56 1.51 0 26 5.13 No 59 0.82 Yes 0 0 No -25 0.51 No 45 77.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 123642165 - NM_022782 MPHOSPH9 1 0.4 0.19 12 5.13 71.57 29 5.57 Yes 61 0.45 No 0 0 No -28 0.83 Yes 42 76.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123646740 - NM_022782 MPHOSPH9 1 5.76 3.97 68 5.3 69.79 22 5.04 No 32 1.1 Yes 31 0.57 Yes -21 0.43 No 35 52.92 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 123646740 - NM_022782 MPHOSPH9 1 0.48 0.35 17 5.3 69.79 22 5.04 No 32 1.1 Yes 31 0.57 Yes -21 0.43 No 35 52.92 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 123672504 - NM_022782 MPHOSPH9 1 0.41 0.33 17 6.75 80.12 23 5.88 Yes 10 1.73 Yes 0 0 No -26 0.78 Yes 44 83.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123678809 - NM_022782 MPHOSPH9 1 0.09 0.1 7 -1.14 0 46 4.53 No 4 0.54 No 0 0 No -32 0.82 Yes 38 81.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123679095 - NM_022782 MPHOSPH9 1 0.39 0.24 15 8.78 80.51 25 4.98 No 63 0.16 No 0 0 No -21 0.56 No 49 73.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 123687715 - NM_022782 MPHOSPH9 1 0.2 0.11 8 7.54 86.2 19 3.8 No 23 2.03 Yes 0 0 No -23 0.69 Yes 41 59.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 123703074 - NM_022782 MPHOSPH9 1 0.3 0.24 14 -8.05 36.91 30 5.87 Yes 60 -2.06 No 25 0.77 Yes -27 0.34 No 53 25.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 123706271 - NM_022782 MPHOSPH9 1 2.59 1.67 56 7.67 79.97 31 5.86 Yes 18 0.4 No 22 0.6 Yes -30 0.34 No 40 37.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 123706271 - NM_022782 MPHOSPH9 1 0.33 0.18 11 7.67 79.97 31 5.86 Yes 18 0.4 No 22 0.6 Yes -30 0.34 No 40 37.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 123707670 - NM_022782 MPHOSPH9 1 0.58 0.19 12 0.8 0 27 4.31 No 14 0.55 No 0 0 No -30 0.82 Yes 40 76.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123710576 - NM_022782 MPHOSPH9 1 0.87 0.31 15 1.41 0 41 6.43 Yes 40 0.94 Yes 0 0 No -40 0.95 Yes 30 95.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123710899 - NM_022782 MPHOSPH9 1 19.52 6.42 57 9.84 88.74 19 5.57 Yes 26 0.86 Yes 27 0.73 Yes -21 0.48 No 49 57.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 123710899 - NM_022782 MPHOSPH9 1 1 0.36 16 9.84 88.74 19 5.57 Yes 26 0.86 Yes 27 0.73 Yes -21 0.48 No 49 57.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 123712120 - NM_022782 MPHOSPH9 1 14.18 6.69 71 6.86 90.27 29 5.87 Yes 44 -1.3 No 28 0.69 Yes -28 0.55 No 45 48.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 123712161 - NM_022782 MPHOSPH9 1 0.46 0.22 11 -3.3 67.58 38 5.89 Yes 58 -2.51 No 28 0.69 Yes -28 0.45 No 42 62.63 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 123714962 - NM_022782 MPHOSPH9 1 0.44 0.19 11 7.91 89.11 26 5.75 Yes 13 0.51 No 0 0 No -25 0.84 Yes 45 74.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 75182778 + NM_002435 MPI 1 1.51 0.64 29 9 78.11 14 5.94 Yes 1 1.03 Yes 18 0.55 Yes -27 0.35 No 43 62.55 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 75182893 + NM_002435 MPI 1 1.38 0.54 31 5.02 75.65 20 5.82 Yes 33 2.07 Yes 25 0.53 Yes -25 0.51 No 45 67.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 75189445 + NM_002435 MPI 1 0.4 0.18 12 2.36 67.03 29 5.49 No 57 -4.22 No 0 0 No -32 0.72 Yes 38 87.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 4357336 + NM_001300862 MPND 1 0.71 0.21 14 8.87 89.62 29 5.57 Yes NA NA NA 28 0.36 Yes -28 0.43 No 42 52.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 4357336 + NM_001300862 MPND 1 6.19 1.71 57 8.87 89.62 29 5.57 Yes NA NA NA 28 0.36 Yes -28 0.43 No 42 52.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 4357947 + NM_001300862 MPND 1 1.11 0.54 27 9.37 78.08 36 6.47 Yes 64 -0.68 No 25 0.82 Yes -25 0.86 Yes 45 87.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 4358837 + NM_001300862 MPND 1 0.5 0.14 7 8.5 85.7 31 5.73 Yes -3 0.79 Yes 0 0 No -30 0.72 Yes 44 57.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 154007625 - NM_001166462 MPP1 1 1.32 0.43 23 1.21 0 28 6.63 Yes 76 1.62 Yes 0 0 No -27 0.95 Yes 43 95.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 67720920 + NM_022474 MPP5 1 3.03 0.54 27 12.56 88.27 32 5.98 Yes 19 0.84 Yes 31 0.68 Yes -31 0.86 Yes 39 90.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 67745966 + NM_022474 MPP5 1 51.13 11.28 72 5.66 82.87 26 5.96 Yes 70 -4.56 No 25 0.44 Yes -25 0.63 No 45 49.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 67759278 + NM_022474 MPP5 1 0.59 0.25 16 3.69 69.38 30 5.18 No 69 0.31 No 0 0 No -25 0.57 No 41 68.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 24663666 + NM_016447 MPP6 1 0.44 0.4 23 1.94 76.99 13 4.47 No 42 1.16 Yes 18 0.56 Yes -21 0.61 No 49 38.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 24663680 + NM_016447 MPP6 1 0.9 0.94 40 6 91.75 24 4.24 No 56 1.16 Yes 18 0.56 Yes -18 0.55 No 52 73.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 24665298 + NM_016447 MPP6 1 0.15 0.17 12 7.64 88 30 6.86 Yes 3 1.1 Yes 0 0 No -29 0.52 No 41 66.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 24701459 + NM_016447 MPP6 1 3.11 3.82 69 4.7 69.75 42 6.09 Yes 44 0.27 No 0 0 No -24 0.87 Yes 46 88.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 24706483 + NM_016447 MPP6 1 0.08 0.14 10 6.76 89.41 12 5.62 Yes 48 -3.41 No 25 0.47 Yes -20 0.62 No 50 56.4 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 11884622 - NR_040243 MPPE1 1 1.4 0.15 9 3.75 0 27 6.23 Yes 14 1.22 Yes 0 0 No -32 0.51 No 38 66.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 11885912 - NR_040243 MPPE1 1 0.83 0.19 11 1.28 72.2 23 4.65 No 28 0.39 No 22 0.44 Yes -19 0.31 No 63 34.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 11895277 - NR_040243 MPPE1 1 3.08 0.67 32 6.76 85.67 19 5.48 No 6 1.09 Yes 18 0.55 Yes -18 0.73 Yes 52 89.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 11897620 - NR_040243 MPPE1 1 10.32 1.58 56 6.12 75.3 75 7.95 Yes 29 0.97 Yes 26 0.89 Yes -26 0.93 Yes 44 93.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 11902856 - NR_040243 MPPE1 1 0.54 0.13 9 9.91 92.79 43 6.82 Yes NA NA NA 29 0.52 Yes -29 0.69 Yes 28 71.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 11905953 - NR_040243 MPPE1 1 30.58 4.28 68 10.05 89.09 22 4.57 No 9 1.38 Yes 21 0.79 Yes -21 0.88 Yes 49 84.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 16960949 + NM_015134 MPRIP 1 1.65 2.51 61 5.57 89.74 31 5.42 No 27 0.5 No 30 0.64 Yes -30 0.37 No 43 67.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 16973176 + NM_015134 MPRIP 1 0.65 0.96 43 13.38 93.46 53 7.84 Yes 40 1.83 Yes 0 0 No -23 0.74 Yes 47 81.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16988616 + NM_015134 MPRIP 1 0.06 0.1 7 11.32 86.61 30 6.59 Yes 25 1.28 Yes 0 0 No -29 0.92 Yes 41 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 17000081 + NM_015134 MPRIP 1 2.08 3.82 70 11.37 89.47 27 6.32 Yes 14 1.58 Yes 26 0.83 Yes -26 0.87 Yes 44 90.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17009878 + NM_015134 MPRIP 1 0.1 0.19 13 11.67 89.2 28 5.48 No 46 -1.78 No 0 0 No -25 0.73 Yes 45 92.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17030033 + NM_015134 MPRIP 1 0.16 0.32 16 5.58 83.92 16 4.62 No 28 1.61 Yes 0 0 No -40 0.63 No 30 90.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 17041445 + NM_015134 MPRIP 1 0.6 0.18 11 11.74 92.55 31 5.83 Yes NA NA NA 0 0 No -27 0.65 No 43 78.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 17046850 + NM_015134 MPRIP 1 0.14 0.15 9 1.78 68.51 35 7.28 Yes 22 -0.99 No 24 0.98 Yes -34 0.81 Yes 36 91.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17053461 + NM_015134 MPRIP 1 0.13 0.21 12 -0.05 0 30 5.83 Yes 64 0.79 Yes 0 0 No -29 0.89 Yes 41 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 17064532 + NM_015134 MPRIP 1 0.34 0.25 14 2.64 69.19 24 5.47 No 2 -1.25 No 25 0.55 Yes -23 0.89 Yes 47 82.56 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17067422 + NM_015134 MPRIP 1 33.7 24.15 72 3.15 79.93 27 5.46 No 14 1.33 Yes 26 0.96 Yes -26 0.79 Yes 44 93.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17075966 + NM_015134 MPRIP 1 0.1 0.18 11 5.57 80.68 21 5.92 Yes 46 -1.07 No 0 0 No -28 0.57 No 42 57.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 17077100 + NM_015134 MPRIP 1 0.47 0.5 27 5.26 82.11 28 5.58 Yes 29 0.13 No 0 0 No -28 0.85 Yes 42 85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17082845 + NM_015134 MPRIP 1 0.06 0.11 8 9.98 93.97 25 5.09 No 12 0.57 No 0 0 No -24 0.71 Yes 46 73.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17083318 + NM_015134 MPRIP 1 0.08 0.15 9 -16.74 0 35 6.24 Yes 22 0.95 Yes 0 0 No -34 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 17083920 + NM_015134 MPRIP 1 2.37 4.04 69 10.48 83.14 24 8.25 Yes 11 1.43 Yes 23 0.94 Yes -23 0.96 Yes 47 97.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 17091641 + NM_015134 MPRIP 1 0.31 0.53 27 3.92 81.43 10 5 No 73 -5.84 No 0 0 No -25 0.48 No 52 53.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 37419792 + NM_021126 MPST 1 10.18 0.74 35 5.99 80.11 25 5 No 12 0.21 No 28 0.49 Yes -24 0.33 No 52 52.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 37421042 + NM_021126 MPST 1 0.9 0.54 30 11.33 93.68 120 11.37 Yes 72 1.77 Yes 21 0.57 Yes -21 0.3 No 49 59.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 37423039 + NM_021126 MPST 1 2.5 1.43 54 8.27 87.13 28 5.29 No 24 -0.43 No 0 0 No -27 0.8 Yes 43 63.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 37425304 + NM_021126 MPST 1 0.37 0.26 15 6.68 82.97 17 5.74 Yes 4 0.7 No 0 0 No -31 0.67 Yes 39 50.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 27534546 - NM_002437 MPV17 1 0.3 0.53 30 10.72 83.17 20 6.4 Yes 7 2.48 Yes 19 0.86 Yes -19 0.7 Yes 51 80.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27535939 - NM_002437 MPV17 1 0.87 0.65 36 2.63 81.47 31 5.73 Yes 50 1.22 Yes 0 0 No -30 0.91 Yes 40 86.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27535939 - NM_002437 MPV17 1 0.19 0.15 9 2.63 81.47 31 5.73 Yes 50 1.22 Yes 0 0 No -30 0.91 Yes 40 86.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27535942 - NM_002437 MPV17 1 9.06 6.94 71 5.18 80.5 28 5.55 No 47 1.22 Yes 27 0.87 Yes -27 0.92 Yes 43 90.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27535942 - NM_002437 MPV17 1 0.19 0.15 11 5.18 80.5 28 5.55 No 47 1.22 Yes 27 0.87 Yes -27 0.92 Yes 43 90.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27536022 - NM_002437 MPV17 1 1.5 1.04 44 4.07 71.44 32 5.92 Yes 29 0.09 No 29 0.81 Yes -31 0.82 Yes 42 77.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27540041 - NM_002437 MPV17 1 2.18 1.67 60 2.66 76.7 17 4.77 No 63 -3.59 No 23 0.51 Yes -23 0.68 Yes 50 69.78 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27540102 - NM_002437 MPV17 1 3.3 2.44 63 2.49 80.47 15 5.1 No 23 1.18 Yes 23 0.57 Yes -23 0.61 No 47 57.65 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 18305771 + NM_032683 MPV17L2 1 0.23 0.18 11 2.14 0 26 7.14 Yes 53 1.66 Yes 0 0 No -25 0.96 Yes 45 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 167702393 + NM_003953 MPZL1 1 1.41 0.64 34 9.81 89.13 30 5.74 Yes 57 0.74 No 0 0 No -29 0.87 Yes 41 73.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 167741530 + NM_003953 MPZL1 1 0.18 0.17 11 4.61 74.41 27 5.29 No 14 1.08 Yes 0 0 No -26 0.88 Yes 44 92.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 167742474 + NM_003953 MPZL1 1 1.04 0.83 38 2.93 80.83 28 6.57 Yes 15 0.72 No 0 0 No -28 0.73 Yes 42 77.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 167743985 + NM_003953 MPZL1 1 25.65 3.17 68 4 69.58 56 9.97 Yes 43 1.78 Yes 0 0 No -55 0.92 Yes 15 94.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118111057 - NM_198275 MPZL3 1 3.21 0.29 17 -0.31 0 19 3.13 No 49 -1.82 No 30 0.41 Yes -41 0.59 No 40 80.26 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 118111067 - NM_198275 MPZL3 1 1.48 0.13 8 0.8 82.99 32 5.74 Yes 73 0.84 Yes 30 0.41 Yes -31 0.49 No 50 64.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 181021356 + NM_001310213 MR1 1 0.19 0.18 12 5.02 73.63 23 4.27 No 55 -5.37 No 21 0.89 Yes -25 0.48 No 45 59.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 181021370 + NM_001310213 MR1 1 62.09 53.18 72 5.66 82.6 22 4.79 No 9 0.97 Yes 21 0.89 Yes -22 0.67 Yes 48 74.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 181021457 + NM_001310213 MR1 1 2.89 2.46 65 7.52 88.9 19 5.48 No 6 0.89 Yes 0 0 No -25 0.72 Yes 52 81.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94155010 - NM_005590 MRE11 1 0.2 0.17 10 6.49 78.87 44 8.2 Yes 31 1.61 Yes 0 0 No -43 0.69 Yes 27 69.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94165276 - NM_005590 MRE11 1 0.19 0.17 10 5.6 0 19 4.58 No 6 1.27 Yes 0 0 No -18 0.85 Yes 52 91.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94186501 - NM_005590 MRE11 1 0.21 0.19 12 8.23 83.53 22 4.9 No 9 0.12 No 0 0 No -21 0.59 No 49 70.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94195234 - NM_005590 MRE11 1 0.65 0.56 24 2.5 0 33 7.74 Yes 20 1.1 Yes 0 0 No -32 0.78 Yes 38 74.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94201053 - NM_005590 MRE11 1 0.09 0.1 7 -6.05 0 10 4 No 15 0.61 No 0 0 No -40 0.63 No 30 89.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94202431 - NM_005590 MRE11 1 0.25 0.26 17 3.74 70.65 31 6.79 Yes 2 -1.76 No 0 0 No -30 0.65 No 40 73.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94206625 - NM_005590 MRE11 1 0.29 0.25 13 1.61 70.82 29 5.66 Yes 61 0.95 Yes 0 0 No -32 0.6 No 38 76.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94206628 - NM_005590 MRE11 1 1.89 1.6 49 6.39 78.36 26 5.55 No 58 0.95 Yes 29 0.72 Yes -29 0.6 No 41 76.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 94208786 - NM_005590 MRE11 1 1.13 1.04 41 3.96 84.47 22 5.05 No 33 0.48 No 22 0.81 Yes -21 0.7 Yes 49 61.44 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 94212039 - NM_005590 MRE11 1 0.17 0.17 9 0.44 0 31 7.94 Yes 18 1.8 Yes 0 0 No -30 0.93 Yes 40 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94219232 - NM_005590 MRE11 1 0.33 0.44 19 4.16 90.44 25 5.29 No 28 1.19 Yes 0 0 No -24 0.71 Yes 46 49.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94226064 - NM_005590 MRE11 1 0.79 0.36 21 0.76 0 12 4.24 No 10 0.53 No 21 0.66 Yes -30 0.66 No 40 59.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 216809749 - NM_018000 MREG 1 0.15 0.54 22 3.32 80.97 49 7.16 Yes 69 1.11 Yes 30 0.26 Yes -27 0.6 No 37 81.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 216820408 - NM_018000 MREG 1 1.34 2.9 56 11.25 85.46 25 5.81 Yes 63 1.08 Yes 0 0 No -24 0.47 No 51 58.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 216825982 - NM_018000 MREG 1 0.76 1.9 54 3.18 80.82 26 4.24 No 32 0.66 No 0 0 No -21 0.38 No 49 82.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 216825999 - NM_018000 MREG 1 0.09 0.22 13 7.58 84.04 22 4.93 No 15 0.67 No 0 0 No -21 0.95 Yes 49 80.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 216841416 - NM_018000 MREG 1 0.75 1.76 58 7.06 81.09 33 6.92 Yes 20 0.13 No 0 0 No -32 0.5 No 41 74.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 216863001 - NM_018000 MREG 1 0.16 0.19 12 4.89 85.79 28 5.29 No 55 0.27 No 0 0 No -27 0.38 No 15 34.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 216863026 - NM_018000 MREG 1 0.08 0.11 7 2.71 83.13 31 3.61 No 30 0.28 No 0 0 No -24 0.31 No 34 28.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 216865568 - NM_018000 MREG 1 0.13 0.19 11 9.27 89.93 25 6.89 Yes 12 2.05 Yes 0 0 No -24 0.78 Yes 46 93.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61429972 + NR_136405 MRGBP 1 0.3 0.17 8 4.6 76.56 25 5.15 No 61 1.08 Yes 0 0 No -24 0.89 Yes 46 83.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61430822 + NR_136405 MRGBP 1 0.89 0.61 27 9.13 98.31 18 4.9 No 5 0.79 Yes 0 0 No -40 0.58 No 39 75.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 13879172 + NM_001031727 MRI1 1 12.02 5.72 71 3.77 82.33 25 4.9 No 12 0.48 No 24 0.95 Yes -24 0.95 Yes 46 91.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 13879172 + NM_001031727 MRI1 1 21.16 9.85 72 3.77 82.33 25 4.9 No 12 0.48 No 24 0.95 Yes -24 0.95 Yes 46 91.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 13880391 + NM_001031727 MRI1 1 0.65 0.57 28 9.71 84.43 25 5.41 No 12 1.67 Yes 0 0 No -24 0.81 Yes 46 82.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34959357 + NM_024864 MRM1 1 0.91 0.33 16 7.61 83.37 21 4.18 No 8 0.93 Yes 0 0 No -26 0.77 Yes 44 71.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34961787 + NM_024864 MRM1 1 0.33 0.14 8 10.25 88.27 42 7.97 Yes 34 2.4 Yes 0 0 No -46 0.8 Yes 24 91.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34964319 + NM_024864 MRM1 1 0.55 0.35 16 2.12 73.93 15 5.34 No -4 2.37 Yes 23 0.95 Yes -23 0.79 Yes 47 70.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2278573 - NM_013393 MRM2 1 15.71 17.28 72 12.72 82.97 41 10.88 Yes 28 0.49 No 28 0.76 Yes -34 0.29 No 36 40.61 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 2279312 - NM_013393 MRM2 1 18.02 9.1 72 11.1 90.31 25 5.48 No 71 1.31 Yes 0 0 No -24 0.7 Yes 46 77.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 686325 + NM_018146 MRM3 1 1.14 0.88 36 3.51 76.53 41 6.28 Yes 28 1.1 Yes 0 0 No -34 0.69 Yes 36 85.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179266832 - NM_016175 MRNIP 1 2.1 0.19 13 7.36 80.89 34 5.64 Yes 73 0.64 No 0 0 No -27 0.48 No 51 56.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179280277 - NM_016175 MRNIP 1 7.68 1.33 47 7.88 82.58 17 5.74 Yes 4 -0.09 No 26 0.6 Yes -26 0.87 Yes 44 81.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145215898 + NM_032450 MROH1 1 8.74 0.57 25 5.26 90.77 16 5.2 No 50 -0.24 No 19 0.65 Yes -25 0.83 Yes 45 87.5 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145223250 + NM_032450 MROH1 1 0.38 0.14 9 2.66 80.13 25 4.15 No 61 1.79 Yes 0 0 No -20 0.71 Yes 50 41.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 145223890 + NM_032450 MROH1 1 0.78 0.31 14 5.55 84.93 31 5.42 No 27 -1.09 No 0 0 No -28 0.92 Yes 42 86.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145229407 + NM_032450 MROH1 1 0.63 0.25 14 9.17 94.37 36 5.06 No 16 1.43 Yes 0 0 No -31 0.43 No 35 56.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145229747 + NM_032450 MROH1 1 1.15 0.49 24 7.39 86.43 47 5.91 Yes 9 0.34 No 0 0 No -21 0.82 Yes 38 62.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 145233061 + NM_032450 MROH1 1 0.74 0.28 16 2.75 0 34 7.89 Yes 29 1.31 Yes 0 0 No -41 0.48 No 29 65.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145247208 + NM_032450 MROH1 1 0.4 0.19 12 -1.38 68.8 25 6.16 Yes 12 1.95 Yes 27 0.97 Yes -24 0.92 Yes 46 92.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 145267896 + NM_032450 MROH1 1 30.25 5.1 69 7.18 85.37 30 6.87 Yes 14 0.7 No 26 0.58 Yes -26 0.53 No 44 56.28 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 145268908 + NM_032450 MROH1 1 3.34 0.53 31 4.1 76.7 32 5.94 Yes 26 1.14 Yes 32 0.46 Yes -32 0.46 No 38 51.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 145279197 + NM_032450 MROH1 1 0.83 0.13 8 1.46 0 26 4.95 No 41 1.18 Yes 0 0 No -26 0.35 No 45 37.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145314126 + NM_032450 MROH1 1 0.78 0.1 7 4.49 78.5 20 4.9 No 16 -0.46 No 18 0.86 Yes -20 0.79 Yes 50 68.78 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 145315385 + NM_032450 MROH1 1 1.93 0.1 7 8.33 70.77 31 5.65 Yes 36 1.64 Yes 0 0 No -30 0.49 No 34 66.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145315817 + NM_032450 MROH1 1 1.58 0.19 11 1.44 0 11 4.12 No 67 -5.1 No 0 0 No -25 0.66 No 45 59.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145316214 + NM_032450 MROH1 1 1.64 0.21 12 -1.05 0 33 6.07 Yes 33 1.75 Yes 0 0 No -32 0.93 Yes 38 60.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 55188330 + NR_037640 MROH7-TTC4 1 0.08 0.11 8 7.22 76.75 41 5.99 Yes 72 -3.14 No 0 0 No -25 0.73 Yes 45 76.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 55199283 + NR_037640 MROH7-TTC4 1 0.14 0.15 9 -8.41 0 24 4.85 No 74 0.24 No 0 0 No -23 0.76 Yes 58 54.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 78799752 + NM_020236 MRPL1 1 0.08 0.17 10 8.02 77.53 23 6.92 Yes 10 1.13 Yes 0 0 No -22 0.57 No 41 75.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 78802619 + NM_020236 MRPL1 1 0.13 0.21 14 2.3 84.41 25 8.03 Yes 12 0.45 No 0 0 No -24 0.85 Yes 46 83.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 78804749 + NM_020236 MRPL1 1 0.15 0.21 13 -0.11 82.65 47 7.7 Yes 34 0.2 No 0 0 No -31 0.63 No 39 62.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 78804753 + NM_020236 MRPL1 1 0.41 0.54 28 1.46 0 51 7.93 Yes 38 0.19 No 0 0 No -35 0.55 No 35 51.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 78813889 + NM_020236 MRPL1 1 0.06 0.1 7 8.87 89.34 36 6 Yes 38 0.59 No 0 0 No -35 0.42 No 41 58.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 78817527 + NM_020236 MRPL1 1 0.06 0.17 8 9.01 80.76 29 5.92 Yes 16 0.5 No 0 0 No -28 0.64 No 42 81.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 78828099 + NM_020236 MRPL1 1 1.05 2.89 71 5.48 73.09 36 6.68 Yes 23 0.56 No 28 0.79 Yes -28 0.82 Yes 42 84.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 78856569 + NM_020236 MRPL1 1 0.19 0.29 17 5.12 83.86 24 5.99 Yes 11 0.99 Yes 0 0 No -23 0.55 No 47 59.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 78858747 + NM_020236 MRPL1 1 0.05 0.1 7 12.19 93.47 23 4.93 No 14 0.7 No 0 0 No -22 0.77 Yes 48 87.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 78873619 + NM_020236 MRPL1 1 0.09 0.13 7 -2.01 55.68 32 5.87 Yes 43 0.17 No 27 0.49 Yes -31 0.85 Yes 39 65.76 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 66204381 - NR_120589 MRPL11 1 0.95 4 65 2.49 72.71 39 7.43 Yes 26 0.59 No 23 0.94 Yes -23 0.75 Yes 47 93.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 66204729 - NR_120589 MRPL11 1 0.08 0.31 17 -6.53 0 9 3.87 No 27 1.02 Yes 18 0.83 Yes -32 0.67 Yes 38 67.73 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 66204907 - NR_120589 MRPL11 1 0.47 1.78 53 1.93 0 11 4.06 No 17 0.89 Yes 21 0.81 Yes -29 0.95 Yes 41 97.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79671663 + NM_002949 MRPL12 1 0.08 0.4 23 -13.13 0 38 6.16 Yes 45 -1.63 No 0 0 No -23 0.85 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 79671825 + NM_002949 MRPL12 1 0.05 0.25 15 7.39 82.42 25 6.93 Yes 12 0.62 No 0 0 No -24 0.94 Yes 46 94.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79674162 + NM_002949 MRPL12 1 0.02 0.13 8 -10.76 0 19 3.37 No 16 1.99 Yes 0 0 No -28 0.83 Yes 42 89.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 121408389 - NM_014078 MRPL13 1 0.07 0.42 18 -2.88 65.09 14 5.6 Yes 62 0.53 No 30 0.67 Yes -29 0.36 No 51 23.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 121426350 - NM_014078 MRPL13 1 0.04 0.19 14 -23.51 0 21 5.21 No 8 0.93 Yes 0 0 No -26 0.61 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 121430832 - NM_014078 MRPL13 1 0.04 0.22 15 3.83 93.38 24 5.17 No 11 0.08 No 0 0 No -23 0.7 Yes 47 67.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 121452486 - NM_014078 MRPL13 1 0.05 0.19 12 10.3 89.8 20 5.57 Yes 58 0.56 No 0 0 No -26 0.73 Yes 44 92.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 55049833 + NM_014175 MRPL15 1 0.03 0.1 7 2.2 0 11 3.87 No 11 0.84 Yes 0 0 No -30 0.57 No 47 65.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 55051410 + NM_014175 MRPL15 1 0.12 0.21 11 1.16 0 37 6.07 Yes 28 1.15 Yes 0 0 No -36 0.77 Yes 34 69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 59574228 - NM_017840 MRPL16 1 0.03 0.14 8 2.09 65.88 28 8.82 Yes 15 0.96 Yes 0 0 No -27 0.67 Yes 43 69.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 59576346 - NM_017840 MRPL16 1 0.13 0.38 22 -3.55 0 28 6.12 Yes 15 1.36 Yes 27 0.87 Yes -27 0.61 No 25 39.66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 59576350 - NM_017840 MRPL16 1 0.07 0.21 11 -0.12 59.91 24 5.92 Yes 11 1.38 Yes 27 0.87 Yes -23 0.6 No 29 35.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 75888541 + NM_014763 MRPL19 1 0.04 0.15 8 6.34 86.56 21 5.1 No 36 1 Yes 0 0 No -20 0.71 Yes 50 79.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43023357 - NM_001300848 MRPL2 1 741.38 107.24 72 6.8 92.53 16 4.64 No 44 0.78 Yes 20 0.73 Yes -20 0.76 Yes 50 55.88 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 43023357 - NM_001300848 MRPL2 1 6.12 0.99 40 6.8 92.53 16 4.64 No 44 0.78 Yes 20 0.73 Yes -20 0.76 Yes 50 55.88 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 1341727 - NM_001318485 MRPL20 1 0.31 1.96 57 3.38 78.4 32 6.78 Yes 19 2 Yes 31 0.91 Yes -31 0.92 Yes 39 94.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 68658886 - NM_181515 MRPL21 1 0.09 0.31 12 -4.45 63.08 17 3.71 No 4 -1.42 No 25 0.76 Yes -23 0.4 No 50 38.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68659189 - NM_181515 MRPL21 1 0.15 0.51 27 8.5 87.44 23 6.08 Yes -2 1.02 Yes 0 0 No -22 0.93 Yes 48 95.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68660458 - NM_181515 MRPL21 1 0.16 0.57 32 2.95 0 22 6.5 Yes 9 0.87 Yes 0 0 No -31 0.81 Yes 39 86.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68664145 - NM_181515 MRPL21 1 0.06 0.14 10 -0.97 76.23 32 6.63 Yes 19 1.55 Yes 0 0 No -31 0.62 No 39 70.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 68664307 - NM_181515 MRPL21 1 0.1 0.19 13 10.78 92.48 28 6.31 Yes 15 2.3 Yes 27 0.97 Yes -27 0.93 Yes 43 93.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 68670972 - NM_181515 MRPL21 1 0.07 0.14 9 6.12 71.12 27 5.29 No 42 0.55 No 0 0 No -26 0.88 Yes 44 94.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 154330362 + NM_014180 MRPL22 1 0.84 2.25 59 8.09 88.61 20 5.1 No 7 1.29 Yes 19 0.67 Yes -19 0.82 Yes 51 90.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 154338610 + NM_014180 MRPL22 1 0.08 0.32 18 6.2 87.44 22 4.99 No 66 1.03 Yes 21 0.87 Yes -21 0.83 Yes 49 90.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 154338928 + NM_014180 MRPL22 1 0.14 0.57 29 8.54 83.68 32 3.77 No 10 0.51 No 0 0 No -25 0.89 Yes 45 92.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 1973317 + NM_021134 MRPL23 1 0.08 0.26 12 5.54 85.11 21 4.36 No 33 -0.55 No 31 0.75 Yes -20 0.51 No 50 43.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 1976840 + NM_021134 MRPL23 1 0.55 3.1 68 7.13 82.4 25 5.28 No 46 -2.01 No 24 0.8 Yes -24 0.52 No 46 68.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156710341 - NM_024540 MRPL24 1 0.41 0.42 22 4.86 77.34 20 5.88 Yes 28 0.67 No 0 0 No -28 0.72 Yes 42 78.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 48445574 - NM_016504 MRPL27 1 0.14 0.39 21 5.83 79.47 26 5.39 No 55 -2.87 No 0 0 No -25 0.7 Yes 41 76.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 48445675 - NM_016504 MRPL27 1 0.38 1.04 37 -2.98 0 14 4.12 No 9 0.76 No 21 0.96 Yes -13 0.65 No 49 34.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 48446229 - NM_016504 MRPL27 1 0.04 0.11 7 1.28 60.84 33 6.58 Yes 20 0.85 Yes 32 0.84 Yes -32 0.72 Yes 38 81.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 48448517 - NM_016504 MRPL27 1 0.15 0.32 17 -4.32 46.98 43 7.67 Yes 30 1 Yes 0 0 No -42 0.37 No 28 66.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 48449963 - NM_016504 MRPL27 1 0.06 0.14 8 12.07 84.13 31 6.56 Yes 18 0.93 Yes 0 0 No -30 0.76 Yes 40 74.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 418627 - NM_006428 MRPL28 1 0.11 0.31 18 -1.09 0 12 4.24 No 10 0.37 No 0 0 No -27 0.76 Yes 43 37.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 418888 - NM_006428 MRPL28 1 0.06 0.18 11 7.94 94.19 28 4.36 No 54 -0.78 No 0 0 No -21 0.55 No 46 58.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 131207645 - NM_007208 MRPL3 1 0.03 0.21 14 7.53 86.85 30 6.31 Yes 49 0.95 Yes 25 0.74 Yes -25 0.4 No 41 52.02 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 131208921 - NM_007208 MRPL3 1 0.18 1.13 42 0.44 0 27 8.61 Yes 44 0.41 No 0 0 No -26 0.82 Yes 44 81.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 131208924 - NM_007208 MRPL3 1 0.09 0.54 29 -11.68 0 24 8.45 Yes 41 0.41 No 0 0 No -23 0.86 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 131220536 - NM_007208 MRPL3 1 0.05 0.17 10 2.79 76.8 29 5.74 Yes 51 -1.51 No 0 0 No -24 0.29 No 46 26.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 131220769 - NM_007208 MRPL3 1 0.63 2.21 58 7.56 98.98 16 5.2 No 21 -1.45 No 23 0.51 Yes -18 0.29 No 52 39.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 99803381 + NM_145212 MRPL30 1 1.15 1.17 47 11.54 86.64 17 4.15 No 19 0.88 Yes 25 0.82 Yes -25 0.82 Yes 45 69.03 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 99809254 + NM_145212 MRPL30 1 0.07 0.14 7 7.44 80.51 26 5.64 Yes 13 0.75 No 0 0 No -25 0.61 No 45 86.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 99810195 + NM_145212 MRPL30 1 0.09 0.15 9 5.03 83.26 23 4.89 No 26 0.82 Yes 0 0 No -22 0.83 Yes 48 78.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 99811025 + NM_145212 MRPL30 1 0.09 0.17 11 10.04 95.26 39 5.9 Yes 37 1.11 Yes 0 0 No -34 0.69 Yes 36 83.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 42975444 + NM_031903 MRPL32 1 0.24 0.82 33 9.63 85.44 31 5.95 Yes 34 1.48 Yes 0 0 No -30 0.44 No 39 62.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 42976746 + NM_031903 MRPL32 1 0.12 0.44 21 5.02 70.72 31 3.29 No 24 1.08 Yes 24 0.73 Yes -30 0.59 No 40 53.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 42976762 + NM_031903 MRPL32 1 0.68 2.47 58 6.37 87.37 19 3.91 No 40 1.08 Yes 24 0.73 Yes -24 0.6 No 52 56.18 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 28002023 + NM_004891 MRPL33 1 0.06 0.13 8 10.58 81.59 38 7.16 Yes 25 0.4 No 0 0 No -24 0.61 No 46 79.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 28002023 + NM_004891 MRPL33 1 0.05 0.13 9 10.58 81.59 38 7.16 Yes 25 0.4 No 0 0 No -24 0.61 No 46 79.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 54673032 + NM_001330602 MRPL37 1 0.08 0.39 22 8.76 88.27 30 5.83 Yes 33 0.55 No 29 0.55 Yes -24 0.59 No 46 64.28 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 54675620 + NM_001330602 MRPL37 1 0.03 0.11 7 -1.34 75.3 23 5.74 Yes 10 1.78 Yes 20 0.81 Yes -22 0.78 Yes 48 79.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73896920 - NM_032478 MRPL38 1 0.15 0.39 21 -1.92 0 11 4.12 No 19 1.13 Yes 0 0 No -31 0.94 Yes 39 93.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73897998 - NM_032478 MRPL38 1 1.32 2.75 66 1.6 0 17 5.99 Yes 4 0.27 No 0 0 No -26 0.61 No 44 72.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 73900755 - NM_032478 MRPL38 1 0.1 0.19 12 2.2 71.15 12 7.42 Yes 55 1.16 Yes 29 0.42 Yes -29 0.25 No 41 33.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 26960102 - NM_017446 MRPL39 1 0.17 0.64 29 6.56 87.82 18 4.45 No 37 0.86 Yes 20 0.89 Yes -20 0.9 Yes 50 93.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 26960115 - NM_017446 MRPL39 1 0.06 0.21 12 7.05 79.84 32 5.53 No 24 0.85 Yes 20 0.89 Yes -31 0.75 Yes 39 87.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 26960617 - NM_017446 MRPL39 1 0.15 0.53 25 2.82 0 34 6.16 Yes 21 0.85 Yes 0 0 No -28 0.54 No 42 69.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 26960621 - NM_017446 MRPL39 1 0.06 0.21 13 2.61 84.41 30 5.83 Yes 17 0.87 Yes 0 0 No -24 0.54 No 46 70.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 26964596 - NM_017446 MRPL39 1 0.64 1.92 55 0.71 0 21 4.58 No 44 0 No 0 0 No -20 0.77 Yes 50 65.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 26965175 - NM_017446 MRPL39 1 0.04 0.11 7 2.6 75.93 21 5.64 Yes 74 0.54 No 0 0 No -28 0.65 No 50 74.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 26965214 - NM_017446 MRPL39 1 0.47 1.46 55 2.43 86.95 22 3.55 No 35 0.53 No 0 0 No -22 0.66 No 48 67.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 26965233 - NM_017446 MRPL39 1 0.07 0.18 10 1.88 76.21 20 4.69 No 16 0.52 No 0 0 No -23 0.83 Yes 47 84.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 26965273 - NM_017446 MRPL39 1 0.45 1.29 51 1.25 0 44 6.55 Yes 31 0.34 No 0 0 No -36 0.74 Yes 34 82.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 26965307 - NM_017446 MRPL39 1 0.04 0.11 7 4.95 81.23 22 5.81 Yes 70 0.53 No 31 0.67 Yes -21 0.84 Yes 49 87.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 26972149 - NM_017446 MRPL39 1 0.56 1.6 55 6.02 68.41 29 6.05 Yes 71 1.27 Yes 28 0.65 Yes -34 0.62 No 36 84.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 26976134 - NM_017446 MRPL39 1 0.06 0.18 9 6.24 78.74 38 5.59 Yes 6 0.25 No 0 0 No -24 0.49 No 33 54.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 26979278 - NM_017446 MRPL39 1 0.11 0.28 18 10.71 93.96 23 7.6 Yes 10 1.06 Yes 0 0 No -22 0.62 No 48 52.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10367316 + NM_146388 MRPL4 1 0.03 0.1 7 6.91 87.16 36 5.23 No 3 1.69 Yes 0 0 No -32 0.83 Yes 38 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10368900 + NM_146388 MRPL4 1 0.05 0.15 10 -9.53 71.63 24 6.93 Yes 11 1.26 Yes 0 0 No -23 0.94 Yes 47 94.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10370292 + NM_146388 MRPL4 1 0.02 0.1 7 10.05 81.31 36 7.35 Yes 23 2.51 Yes 35 0.93 Yes -35 0.85 Yes 35 88.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 19422263 + NM_001318152 MRPL40 1 0.1 0.18 11 0.4 0 26 6.68 Yes 62 1.06 Yes 0 0 No -25 0.61 No 45 58.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 19423149 + NM_001318152 MRPL40 1 0.57 1.13 45 0.43 68.79 18 4.9 No -4 1.93 Yes 19 0.89 Yes -21 0.4 No 42 38.78 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 93862163 + NR_038159 MRPL42 1 1.09 0.68 33 7.63 89.86 32 6.64 Yes 19 0.21 No 0 0 No -31 0.81 Yes 39 83.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 93862967 + NR_038159 MRPL42 1 178.96 103.29 72 7.34 91.19 24 6.08 Yes 11 1.49 Yes 20 0.67 Yes -27 0.63 No 43 70.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 93876112 + NR_038159 MRPL42 1 0.18 0.63 22 8.82 87.29 19 7.9 Yes 6 0.51 No 0 0 No -36 0.41 No 34 58.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 93881597 + NR_038159 MRPL42 1 0.34 0.79 35 4.6 0 40 7.2 Yes 42 0.65 No 0 0 No -32 0.8 Yes 38 87.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 93894960 + NR_038159 MRPL42 1 0.14 0.32 15 0.34 0 13 4.24 No 43 0.54 No 26 0.88 Yes -35 0.9 Yes 35 91.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 36454418 + NM_032351 MRPL45 1 0.42 0.83 40 3.6 0 25 6.32 Yes 12 2.35 Yes 0 0 No -24 0.87 Yes 46 89.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36456622 + NM_032351 MRPL45 1 0.08 0.13 7 7.08 81.49 21 6.79 Yes 8 1.17 Yes 0 0 No -31 0.6 No 39 82.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 36458711 + NM_032351 MRPL45 1 0.12 0.17 9 4.7 83.78 32 6.67 Yes 23 1.41 Yes 31 0.72 Yes -35 0.78 Yes 35 87.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 36468549 + NM_032351 MRPL45 1 0.14 0.35 19 6.74 84.31 24 6.56 Yes 11 1.35 Yes 0 0 No -23 0.8 Yes 47 77.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36477981 + NM_032351 MRPL45 1 0.07 0.13 8 -5.32 46.72 26 6.43 Yes 67 0.18 No 29 0.77 Yes -25 0.4 No 45 60.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 45540756 - NR_033934 MRPL45P2 1 0.78 0.1 7 6.66 89.96 25 5.38 No 12 0.85 Yes 0 0 No -24 0.83 Yes 46 87.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45542502 - NR_033934 MRPL45P2 1 1.72 0.18 13 9.82 92.64 20 4.28 No 1 0.73 No 0 0 No -19 0.41 No 45 44.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 45542710 - NR_033934 MRPL45P2 1 1.52 0.18 10 4.35 90.31 20 5.1 No 7 0.28 No 0 0 No -19 0.73 Yes 51 83.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 45564251 - NR_033934 MRPL45P2 1 2.44 0.28 19 4.88 82.65 35 6.43 Yes 22 1.33 Yes 30 0.73 Yes -34 0.79 Yes 36 88.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45568468 - NR_033934 MRPL45P2 1 0.61 0.19 9 3.87 69.46 46 7.6 Yes 22 0.5 No 0 0 No -34 0.55 No 36 75.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 45568555 - NR_033934 MRPL45P2 1 0.85 0.25 15 3.6 0 25 6.32 Yes 12 2.35 Yes 0 0 No -24 0.87 Yes 46 89.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89003574 - NM_022163 MRPL46 1 0.29 0.43 22 6.65 92.06 16 4.32 No 25 1.12 Yes 0 0 No -25 0.79 Yes 45 68.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 89004251 - NM_022163 MRPL46 1 0.27 0.38 23 5.53 74.84 28 7.03 Yes 15 1.84 Yes 0 0 No -27 0.7 Yes 43 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89005953 - NM_022163 MRPL46 1 0.08 0.11 7 2.6 74.22 42 6.78 Yes 29 0.19 No 0 0 No -41 0.65 No 29 79.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 89007639 - NM_022163 MRPL46 1 0.46 0.65 36 10.7 91.21 28 5.83 Yes 15 1.26 Yes 0 0 No -27 0.95 Yes 43 96.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89008105 - NM_022163 MRPL46 1 4.16 7.19 72 0.03 71.74 20 6.03 Yes 7 2.28 Yes 0 0 No -29 0.73 Yes 41 85.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89008148 - NM_022163 MRPL46 1 0.19 0.32 17 7.01 84.08 28 5.2 No 15 0.15 No 26 0.94 Yes -20 0.28 No 45 41.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 179310555 - NM_177988 MRPL47 1 0.04 0.17 10 7.2 86.96 16 4.66 No 57 1.12 Yes 29 0.57 Yes -26 0.56 No 44 63.08 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 179319168 - NM_177988 MRPL47 1 0.09 0.25 17 3.68 84.95 27 5.29 No 65 -2.31 No 0 0 No -26 0.56 No 48 52.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 179319192 - NM_177988 MRPL47 1 0.12 0.35 20 1.45 84.41 32 5.78 Yes 67 1.45 Yes 0 0 No -29 0.62 No 41 75.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 73528867 + NR_134659 MRPL48 1 0.74 0.99 38 -3.49 83.86 34 6.91 Yes 29 0.23 No 33 0.44 Yes -33 0.96 Yes 37 96.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 73528869 + NR_134659 MRPL48 1 0.08 0.1 7 -7.79 81.65 36 7.05 Yes 31 0.22 No 0 0 No -35 0.96 Yes 35 96.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73528867 + NR_134659 MRPL48 1 2.81 3.79 67 -3.49 83.86 34 6.91 Yes 29 0.23 No 33 0.44 Yes -33 0.96 Yes 37 96.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 73528869 + NR_134659 MRPL48 1 0.72 0.97 46 -7.79 81.65 36 7.05 Yes 31 0.22 No 0 0 No -35 0.96 Yes 35 96.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73534057 + NR_134659 MRPL48 1 1.38 2.04 57 10.52 79.76 32 4.96 No 19 1.39 Yes 31 0.82 Yes -31 0.64 No 39 86.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 73544738 + NR_134659 MRPL48 1 0.11 0.15 8 7.52 93.71 18 5.35 No 26 0.74 No 0 0 No -38 0.8 Yes 32 90.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73554291 + NR_134659 MRPL48 1 1.7 2.28 65 3.02 83.26 28 6.85 Yes 15 1.43 Yes 27 0.79 Yes -27 0.81 Yes 43 88.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 73558214 + NR_134659 MRPL48 1 0.07 0.11 8 6.94 88.07 58 5.51 No 62 0.33 No 0 0 No -21 0.78 Yes 49 81.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73571652 + NR_134659 MRPL48 1 0.67 0.71 34 12.76 93.59 28 5.57 Yes 39 1.06 Yes 0 0 No -27 0.73 Yes 43 78.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73574221 + NR_134659 MRPL48 1 0.22 0.24 14 0.15 0 30 5.83 Yes 45 0.98 Yes 0 0 No -29 0.9 Yes 41 86.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64893206 + NM_004927 MRPL49 1 0.23 0.68 34 2.19 0 12 4.24 No 21 1.95 Yes 0 0 No -33 0.66 No 37 90.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 23299365 + NM_181304 MRPL52 1 0.25 1.17 43 -9.41 0 15 4.24 No 19 -2.52 No 24 0.96 Yes -17 0.35 No 37 32.85 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 23299375 + NM_181304 MRPL52 1 0.06 0.28 17 0.17 0 13 4.36 No 29 -3.14 No 24 0.96 Yes -15 0.32 No 55 33.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 23299399 + NM_181304 MRPL52 1 0.09 0.44 27 0.19 0 29 5.74 Yes 16 1.06 Yes 0 0 No -28 0.97 Yes 42 97.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23299627 + NM_181304 MRPL52 1 7.12 0.46 26 10.22 87.01 10 5.66 Yes 44 0.93 Yes 0 0 No -23 0.32 No 47 17.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 23303382 + NM_181304 MRPL52 1 0.03 0.15 10 0.79 76.87 45 6.34 Yes 32 0.23 No 0 0 No -30 0.56 No 40 77.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 74699377 - NM_053050 MRPL53 1 0.12 0.39 20 -8.6 76.85 25 7.4 Yes 12 1.67 Yes 0 0 No -24 0.96 Yes 46 97.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 228296023 - NM_181462 MRPL55 1 21.84 9.67 72 6.99 76.77 28 5.33 No 1 0.29 No 23 0.84 Yes -27 0.75 Yes 42 71.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 228296023 - NM_181462 MRPL55 1 3.97 1.71 58 6.99 76.77 28 5.33 No 1 0.29 No 23 0.84 Yes -27 0.75 Yes 42 71.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 228296176 - NM_181462 MRPL55 1 20.63 8.56 72 2.97 75.45 33 6.54 Yes 20 1.2 Yes 32 0.85 Yes -32 0.57 No 38 75.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 228296176 - NM_181462 MRPL55 1 3.85 1.65 51 2.97 75.45 33 6.54 Yes 20 1.2 Yes 32 0.85 Yes -32 0.57 No 38 75.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 228296210 - NM_181462 MRPL55 1 0.33 0.14 9 -2.19 65.39 22 4.9 No 9 0.29 No 21 0.96 Yes -21 0.88 Yes 49 83.21 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 228296351 - NM_181462 MRPL55 1 0.28 0.13 7 2.26 67.52 19 4.21 No 6 0.97 Yes 29 0.83 Yes -22 0.92 Yes 48 81.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 21751000 + NM_024026 MRPL57 1 1.3 2.54 62 9.07 90.86 32 5.66 Yes 75 0.85 Yes 0 0 No -25 0.86 Yes 45 85.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73011881 + NM_001303265 MRPL58 1 0.08 0.11 7 0.1 82.42 36 7.8 Yes 23 1.32 Yes 0 0 No -35 0.81 Yes 35 74.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73016561 + NM_001303265 MRPL58 1 2.11 3.38 65 -2.39 0 18 4.12 No 56 2.17 Yes 24 0.34 Yes -35 0.88 Yes 35 77.68 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 151732504 - NM_001300733 MRPL9 1 0.08 0.14 9 0.97 0 24 6.08 Yes 11 1 Yes 0 0 No -23 0.77 Yes 47 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151732508 - NM_001300733 MRPL9 1 2.53 5.1 68 4.33 78.35 20 5.74 Yes 7 1.03 Yes 19 0.62 Yes -19 0.63 No 51 75.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 151734029 - NM_001300733 MRPL9 1 694.16 201.58 72 5.4 85.59 44 8.9 Yes 31 1.95 Yes 20 0.8 Yes -24 0.74 Yes 46 68.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 151734487 - NM_001300733 MRPL9 1 1.09 0.32 19 6.11 87.06 18 4.9 No 32 0.98 Yes 23 0.92 Yes -38 0.5 No 44 65.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 42176109 - NM_018141 MRPS10 1 0.05 0.11 7 -8.09 0 29 5.67 Yes 26 0.23 No 0 0 No -26 0.68 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 42176133 - NM_018141 MRPS10 1 0.16 0.32 15 3.88 66.67 29 5.52 No 70 -3.79 No 26 0.61 Yes -28 0.8 Yes 42 75.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 42181928 - NM_018141 MRPS10 1 6.53 11.56 72 1.76 68.06 36 5.32 No 54 0.09 No 0 0 No -31 0.86 Yes 39 93.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 42181957 - NM_018141 MRPS10 1 1.64 2.99 62 8.1 80.32 29 5.57 Yes 25 0.07 No 28 0.87 Yes -29 0.31 No 39 42.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 42184728 - NM_018141 MRPS10 1 1.04 1.24 45 4.99 80.1 25 5.91 Yes 12 0.56 No 0 0 No -24 0.47 No 41 40.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 89011141 + NM_001321972 MRPS11 1 32.04 41.22 72 7.54 94.25 23 5 No 10 1.77 Yes 19 0.96 Yes -22 0.96 Yes 48 97.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 89018260 + NM_001321972 MRPS11 1 0.27 0.68 33 9.56 93.26 25 6.24 Yes 71 1.39 Yes 24 0.77 Yes -24 0.54 No 46 55.02 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 89018402 + NM_001321972 MRPS11 1 1.4 3.47 70 5.23 80.36 34 6.03 Yes 21 0.87 Yes 33 0.72 Yes -30 0.52 No 37 57.58 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 36926375 - NM_031280 MRPS15 1 0.12 0.57 29 1.87 71.56 34 6.16 Yes 38 -1.23 No 0 0 No -33 0.77 Yes 37 89.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36926971 - NM_031280 MRPS15 1 0.02 0.11 8 -1.83 56.6 32 7.16 Yes 19 0.38 No 0 0 No -35 0.57 No 35 57.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 75009077 - NM_016065 MRPS16 1 2.36 12.14 72 5.25 69.6 38 5.16 No 40 0.89 Yes 23 0.63 Yes -37 0.55 No 33 74.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 75011796 - NM_016065 MRPS16 1 1.4 5.81 72 7.76 77.07 40 8.25 Yes 27 0.07 No 39 0.7 Yes -39 0.93 Yes 31 93.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 75012083 - NM_016065 MRPS16 1 0.12 0.53 27 7.99 82.53 21 4.71 No 8 0.91 Yes 0 0 No -20 0.61 No 50 88.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 43642990 - NM_018135 MRPS18A 1 0.77 2.08 65 2.58 79.25 22 5.28 No 9 0.53 No 0 0 No -21 0.82 Yes 49 85.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43644044 - NM_018135 MRPS18A 1 0.05 0.14 8 5.01 77.77 19 4.84 No 71 -5.91 No 0 0 No -18 0.43 No 42 50.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84379477 + NM_016067 MRPS18C 1 0.23 0.69 32 5.36 80.26 18 5.55 No 5 1.05 Yes 26 0.57 Yes -24 0.53 No 46 65.57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 150274071 + NM_018997 MRPS21 1 0.09 0.56 26 -9.75 73.14 38 7.07 Yes 25 1.14 Yes 0 0 No -37 0.66 Yes 33 72.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150274089 + NM_018997 MRPS21 1 0.09 0.54 27 4.15 85.76 27 5.19 No 43 1.13 Yes 0 0 No -26 0.76 Yes 44 55.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 150274879 + NM_018997 MRPS21 1 0.1 0.57 28 6.42 79.51 18 6.16 Yes 5 1.7 Yes 0 0 No -28 0.73 Yes 42 68.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 150280035 + NM_018997 MRPS21 1 0.02 0.13 7 3.93 0 30 8.12 Yes 17 1.29 Yes 0 0 No -28 0.79 Yes 41 82.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 139065722 + NM_020191 MRPS22 1 12.94 24.81 72 0.23 81.67 17 4.57 No 61 1.64 Yes 21 0.61 Yes -20 0.91 Yes 50 60.38 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 139068169 + NM_020191 MRPS22 1 0.13 0.26 11 7.33 84.05 36 7.55 Yes 67 -3.31 No 27 0.58 Yes -35 0.62 No 43 65.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 139069872 + NM_020191 MRPS22 1 1.02 2.63 69 5.03 83.6 27 6.44 Yes 62 2.07 Yes 26 0.84 Yes -26 0.91 Yes 44 93.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 55917866 - NM_016070 MRPS23 1 0.07 0.22 13 8.85 90.13 54 7.19 Yes 15 1.98 Yes 0 0 No -27 0.92 Yes 43 93.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55918618 - NM_016070 MRPS23 1 1.51 3.47 68 -1.62 0 41 5.91 Yes 69 0.82 Yes 0 0 No -29 0.61 No 41 87.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 15091393 - NM_022497 MRPS25 1 0.04 0.1 7 4.73 76.46 28 6.7 Yes 59 1.45 Yes 0 0 No -27 0.84 Yes 43 83.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15091443 - NM_022497 MRPS25 1 0.44 0.86 36 3.07 86.22 22 5.5 No 9 1.48 Yes 26 0.85 Yes -21 0.64 No 49 70.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 15091443 - NM_022497 MRPS25 1 1.45 2.88 63 3.07 86.22 22 5.5 No 9 1.48 Yes 26 0.85 Yes -21 0.64 No 49 70.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 15094129 - NM_022497 MRPS25 1 0.15 0.31 17 -2.96 0 22 4.58 No 66 0.31 No 0 0 No -53 0.56 No 27 65.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 15102621 - NM_022497 MRPS25 1 0.13 0.24 11 3.45 78.79 30 5.78 Yes 51 0.83 Yes 0 0 No -29 0.48 No 41 64.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 71518355 - NM_001286748 MRPS27 1 0.2 0.5 25 7.16 81.43 39 7.68 Yes 26 0.6 No 38 0.46 Yes -38 0.54 No 32 68.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 71519744 - NM_001286748 MRPS27 1 4.42 8.32 63 9.4 78.12 28 6.24 Yes 15 1.26 Yes 0 0 No -27 0.95 Yes 43 94.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 71522801 - NM_001286748 MRPS27 1 0.05 0.14 8 7.38 89.21 55 7.58 Yes 42 1.14 Yes 0 0 No -30 0.56 No 16 69.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 71523103 - NM_001286748 MRPS27 1 0.43 1.36 46 11.14 91.24 95 6.75 Yes 70 1.32 Yes 24 0.92 Yes -28 0.63 No 46 80.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 71523669 - NM_001286748 MRPS27 1 0.17 0.5 25 9.3 88.04 28 6.24 Yes 15 0.5 No 0 0 No -27 0.76 Yes 43 79.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 71524211 - NM_001286748 MRPS27 1 0.17 0.44 22 -0.98 67.36 26 4.99 No 65 0.87 Yes 21 0.64 Yes -25 0.52 No 45 60.67 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 80852740 - NM_014018 MRPS28 1 0.19 0.47 23 8.71 94.25 19 5.54 No 6 0.69 No 0 0 No -19 0.45 No 51 63.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 80853603 - NM_014018 MRPS28 1 0.08 0.18 9 -1.61 76.6 28 5.54 No 15 0.42 No 0 0 No -27 0.48 No 43 59.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 80870671 - NM_014018 MRPS28 1 3.17 8.21 72 8.5 89.58 28 6.25 Yes 15 0.88 Yes 0 0 No -21 0.7 Yes 49 81.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 80891706 - NM_014018 MRPS28 1 0.31 0.85 37 10.92 89.08 51 5.89 Yes 23 0.46 No 0 0 No -29 0.6 No 41 79.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 80915356 - NM_014018 MRPS28 1 3.95 3.78 71 8.16 83.63 22 5.29 No 9 1.07 Yes 21 0.75 Yes -21 0.74 Yes 49 88.49 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 80941032 - NM_014018 MRPS28 1 1.22 1.26 47 10.38 87.82 27 7.62 Yes 14 1.65 Yes 26 0.97 Yes -26 0.94 Yes 44 96.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 44810642 + NM_016640 MRPS30 1 0.14 0.14 9 10.47 85.01 41 6.4 Yes 28 0.8 Yes 0 0 No -40 0.65 No 30 69.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 44812047 + NM_016640 MRPS30 1 0.8 2.29 63 6.65 84.31 34 5.6 Yes 60 0.72 No 18 0.76 Yes -23 0.64 No 47 53.88 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 44814996 + NM_016640 MRPS30 1 0.37 1.19 44 6.02 76.37 27 5.74 Yes 36 1.34 Yes 26 0.66 Yes -24 0.45 No 50 50.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 41318481 - NM_005830 MRPS31 1 0.19 0.38 23 9.79 78.22 46 10.61 Yes 33 1.81 Yes 0 0 No -45 0.82 Yes 25 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 41326606 - NM_005830 MRPS31 1 0.7 1.69 53 5.96 75.95 29 5.55 No 16 0.27 No 0 0 No -28 0.82 Yes 42 92.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41328235 - NM_005830 MRPS31 1 0.7 1.56 58 1.97 0 23 6 Yes 45 0.71 No 32 0.75 Yes -26 0.79 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr13 41337560 - NM_005830 MRPS31 1 0.21 0.56 32 9.43 90.51 37 4.07 No 15 0.96 Yes 0 0 No -31 0.58 No 39 66.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 52744192 - NR_002816 MRPS31P5 1 79.39 4.82 65 7.26 78.18 28 6.68 Yes 57 1.31 Yes 27 0.94 Yes -27 0.66 No 43 73.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 140706334 - NM_053035 MRPS33 1 0.04 0.15 11 1.24 78.52 35 7.63 Yes 22 0.96 Yes 0 0 No -26 0.57 No 44 51.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 140710418 - NM_053035 MRPS33 1 11.14 25.72 72 8.68 86.75 22 5.2 No 62 2.61 Yes 21 0.82 Yes -21 0.87 Yes 49 86.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 140714275 - NM_053035 MRPS33 1 0.05 0.13 8 0.8 69.98 18 4.9 No 76 -6.37 No 0 0 No -17 0.61 No 53 35.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1822536 - NM_023936 MRPS34 1 8.83 20.67 72 -6.14 0 12 4.24 No 61 -4.76 No 22 0.44 Yes -17 0.68 Yes 53 30.55 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 1822545 - NM_023936 MRPS34 1 0.04 0.13 7 -9.64 0 21 6.07 Yes 52 -4.19 No 22 0.44 Yes -20 0.43 No 30 33.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 1822549 - NM_023936 MRPS34 1 0.05 0.13 8 -1.66 63.66 17 5.77 Yes 48 -3.93 No 22 0.44 Yes -16 0.38 No 61 33.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 1822731 - NM_023936 MRPS34 1 0.52 1.13 40 13.09 90.15 24 5.5 No NA NA NA 18 0.87 Yes -23 0.78 Yes 33 87.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 27875460 + NM_021821 MRPS35 1 0.05 0.14 8 6.69 82.63 26 8.01 Yes 13 1.21 Yes 0 0 No -21 0.78 Yes 49 82.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27878034 + NM_021821 MRPS35 1 0.04 0.1 7 8.65 79.84 13 5.34 No 69 0.69 No 0 0 No -26 0.55 No 44 69.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27878509 + NM_021821 MRPS35 1 0.3 0.74 33 8.02 83.42 25 4.95 No 71 -2.61 No 24 0.72 Yes -24 0.66 No 46 70.49 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 27884526 + NM_021821 MRPS35 1 0.21 0.53 30 3.16 0 21 5.4 No 8 0.78 Yes 0 0 No -31 0.42 No 39 52.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68520395 + NM_033281 MRPS36 1 0.05 0.13 8 10.99 86.22 35 6.67 Yes 10 0.78 Yes 0 0 No -34 0.51 No 36 65.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68522168 + NM_033281 MRPS36 1 0.58 1.46 58 -1.06 0 42 6.59 Yes 14 0.35 No 22 0.73 Yes -26 0.85 Yes 44 89.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 95775849 - NR_136152 MRPS5 1 0.57 0.92 38 8.62 83.1 28 6.24 Yes 15 2.16 Yes 0 0 No -27 0.8 Yes 43 92.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73258543 + NM_015971 MRPS7 1 0.14 0.32 19 -1.68 0 29 5.05 No 29 0.69 No 28 0.73 Yes -28 0.75 Yes 42 78.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73258653 + NM_015971 MRPS7 1 0.07 0.15 9 -5.74 62.82 21 4.72 No 29 0.28 No 21 0.97 Yes -20 0.93 Yes 50 86.4 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73260109 + NM_015971 MRPS7 1 0.18 0.63 33 -2.85 51.41 42 5.13 No 3 0.24 No 0 0 No -15 0.38 No 55 50.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 105665721 + NM_182640 MRPS9 1 0.24 0.44 27 -2.32 69.87 24 4.9 No 51 0.13 No 0 0 No -23 0.95 Yes 47 94.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 105665724 + NM_182640 MRPS9 1 0.13 0.25 13 -0.23 71.16 27 5.2 No 54 0.14 No 0 0 No -26 0.94 Yes 44 90.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 105696816 + NM_182640 MRPS9 1 0.09 0.17 11 7.45 84.53 28 4.8 No 67 0.06 No 0 0 No -27 0.53 No 43 65.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 105705868 + NM_182640 MRPS9 1 1.07 2 58 6.48 82.22 39 7.7 Yes 26 0.73 No 0 0 No -31 0.53 No 39 69.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 125048058 + NM_001346339 MRRF 1 3.79 5.64 72 3.01 85.05 21 4.79 No 8 1.14 Yes 20 0.97 Yes -20 0.81 Yes 50 95.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 125048135 + NM_001346339 MRRF 1 0.09 0.14 7 2.75 63.66 14 4.76 No 1 0.51 No 0 0 No -21 0.4 No 50 45.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125048317 + NM_001346339 MRRF 1 4.71 6.76 72 7.55 77.52 29 6.05 Yes 16 0.45 No 28 0.89 Yes -28 0.86 Yes 42 85.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 125068066 + NM_001346339 MRRF 1 0.46 0.78 37 9.82 79.91 103 9.23 Yes 75 0.76 No 0 0 No -25 0.78 Yes 45 55.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 125073381 + NM_001346339 MRRF 1 0.07 0.14 8 8.43 77.3 28 5.1 No 26 1.46 Yes 0 0 No -28 0.68 Yes 42 86.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 125075507 + NM_001346339 MRRF 1 0.11 0.18 12 -5.64 75.75 34 6.5 Yes 12 0.83 Yes 0 0 No -24 0.68 Yes 46 45.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 24415243 + NM_001286264 MRS2 1 4.18 7.28 72 4.93 74.15 28 5.57 Yes 1 0.49 No 27 0.81 Yes -27 0.82 Yes 43 77.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 24415275 + NM_001286264 MRS2 1 0.19 0.33 20 1.83 83.52 13 3.53 No 33 0.49 No 0 0 No -39 0.62 No 31 81.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 24416337 + NM_001286264 MRS2 1 0.46 0.53 27 7.31 80.84 22 5.72 Yes 9 0.92 Yes 0 0 No -21 0.85 Yes 49 92.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 24418598 + NM_001286264 MRS2 1 0.82 1.26 49 9.36 91.51 39 5.82 Yes 40 0.79 Yes 0 0 No -27 0.82 Yes 43 88.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 24418672 + NM_001286264 MRS2 1 0.84 1.29 49 7.34 74.1 25 5.57 Yes -2 0.52 No 21 0.94 Yes -24 0.77 Yes 46 67.77 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 24423192 + NM_001286264 MRS2 1 2.02 2.9 68 5.7 85.21 25 5.39 No 34 0.5 No 0 0 No -27 0.73 Yes 43 69.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 19585177 + NM_016183 MRTO4 1 0.07 0.13 8 1.47 70.04 31 11.53 Yes 18 1.64 Yes 0 0 No -30 0.73 Yes 40 89.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 60224827 + NM_152866 MS4A1 1 0.15 0.32 21 -4.28 0 15 4.46 No 54 -4.35 No 0 0 No -17 0.61 No 53 59.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 60224830 + NM_152866 MS4A1 1 0.25 0.5 27 4.3 88.84 18 4.78 No 57 -4.54 No 0 0 No -20 0.7 Yes 50 69.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 60225028 + NM_152866 MS4A1 1 1.11 2.31 63 5.01 71.02 21 5.74 Yes 73 -4.78 No 0 0 No -20 0.63 No 50 61.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 60225521 + NM_152866 MS4A1 1 1.04 2.33 60 5.9 83.58 22 5.74 Yes 9 0.95 Yes 21 0.7 Yes -21 0.8 Yes 49 72.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 60229831 + NM_152866 MS4A1 1 1010.24 2169.24 72 8.41 92 26 7.96 Yes 13 0.97 Yes 25 0.91 Yes -25 0.96 Yes 45 95.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 60229834 + NM_152866 MS4A1 1 0.12 0.26 16 -12.74 79.23 29 8.15 Yes 16 0.99 Yes 0 0 No -28 0.97 Yes 42 95.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 60229831 + NM_152866 MS4A1 1 9.86 20.76 72 8.41 92 26 7.96 Yes 13 0.97 Yes 25 0.91 Yes -25 0.96 Yes 45 95.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 60231234 + NM_152866 MS4A1 1 0.34 7.22 72 6.4 83.39 22 5.1 No 62 -3.33 No 25 0.84 Yes -25 0.61 No 45 72.83 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 60231762 + NM_152866 MS4A1 1 0.04 0.82 43 -26.54 0 73 8.65 Yes 60 1.79 Yes 0 0 No -28 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 60232168 + NM_152866 MS4A1 1 0.01 0.28 15 4.34 67.3 30 6.7 Yes 63 0.88 Yes 0 0 No -29 0.87 Yes 41 86.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 60234470 + NM_152866 MS4A1 1 0.5 9.89 72 11.28 94.12 19 5.18 No 6 1.74 Yes 24 0.83 Yes -28 0.43 No 52 68.76 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 60234470 + NM_152866 MS4A1 1 2.22 44.43 72 11.28 94.12 19 5.18 No 6 1.74 Yes 24 0.83 Yes -28 0.43 No 52 68.76 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 60235681 + NM_152866 MS4A1 1 0.01 0.21 8 -8.6 0 14 4 No 21 0.2 No 30 0.5 Yes -13 0.69 Yes 57 60.36 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 60235695 + NM_152866 MS4A1 1 0.01 0.19 9 -9.63 0 10 4.34 No 35 0.19 No 30 0.5 Yes -16 0.4 No 61 26.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 60235716 + NM_152866 MS4A1 1 0 0.13 9 -1.02 0 25 4.91 No -4 0.45 No 30 0.5 Yes -24 0.41 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 60235729 + NM_152866 MS4A1 1 0.02 0.57 26 -0.64 0 10 4 No 9 0.39 No 0 0 No -37 0.32 No 32 45.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 124637921 - NM_001312920 MSANTD2 1 0.53 0.15 8 -0.7 0 25 6.37 Yes 43 1.54 Yes 0 0 No -34 0.67 Yes 36 93.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 124639139 - NM_001312920 MSANTD2 1 3.14 0.89 36 3.95 67.62 36 5.36 No 9 0.87 Yes 0 0 No -32 0.41 No 38 67.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 124641314 - NM_001312920 MSANTD2 1 1.74 0.46 28 10.58 92.4 14 5.95 Yes 1 1 Yes 0 0 No -36 0.48 No 50 38.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 105884769 - NM_001318750 MSANTD4 1 5.98 0.94 38 7.05 87.49 20 5.74 Yes 7 1.72 Yes 0 0 No -29 0.73 Yes 41 78.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 105891829 - NM_001318750 MSANTD4 1 0.82 0.1 7 0.53 81.95 22 4.79 No 51 0.81 Yes 0 0 No -21 0.48 No 48 37.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 105892205 - NM_001318750 MSANTD4 1 1.12 0.14 10 8.97 88.11 52 8.42 Yes 67 1.31 Yes 0 0 No -30 0.6 No 40 50.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 105892642 - NM_001318750 MSANTD4 1 1.2 0.17 10 4.18 78.72 27 5.74 Yes 14 0.64 No 0 0 No -26 0.95 Yes 44 94.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47651222 + NM_001258281 MSH2 1 0.24 0.38 23 1.31 0 34 6.32 Yes 21 0.29 No 0 0 No -33 0.89 Yes 37 85.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47675466 + NM_001258281 MSH2 1 0.27 0.39 23 10.22 85.96 28 5.66 Yes 63 0.24 No 0 0 No -27 0.75 Yes 43 65.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47675580 + NM_001258281 MSH2 1 0.36 0.5 27 7.94 86.43 23 4.9 No 54 0.13 No 0 0 No -22 0.78 Yes 48 77.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47678107 + NM_001258281 MSH2 1 0.2 0.28 16 1.79 87.52 18 4.33 No 65 -4.73 No 0 0 No -25 0.54 No 45 57.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47691418 + NM_001258281 MSH2 1 0.18 0.36 21 4.37 75.71 29 5.77 Yes 16 1.47 Yes 0 0 No -24 0.91 Yes 46 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47708657 + NM_001258281 MSH2 1 0.24 0.33 20 8.17 87.01 45 7.91 Yes 32 1.76 Yes 0 0 No -44 0.31 No 26 39.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47709921 + NM_001258281 MSH2 1 0.35 0.47 24 0.53 0 29 7.03 Yes 16 0.69 No 0 0 No -28 0.74 Yes 42 83.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 79960360 + NM_002439 MSH3 1 0.57 0.33 19 10.53 97.47 25 4.62 No 46 1.57 Yes 0 0 No -28 0.7 Yes 42 88.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 79960963 + NM_002439 MSH3 1 0.2 0.13 7 -7.45 69.23 39 6.89 Yes 26 0.56 No 0 0 No -35 0.77 Yes 35 88.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 79992980 + NM_002439 MSH3 1 0.21 0.11 7 8.62 87.56 35 6.08 Yes 22 0.73 No 0 0 No -34 0.89 Yes 36 93.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 80015302 + NM_002439 MSH3 1 2.82 1.29 51 8.33 88.83 26 5.39 No -2 0.86 Yes 0 0 No -25 0.88 Yes 45 88.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 80042567 + NM_002439 MSH3 1 0.59 0.36 19 2.37 68.43 36 5.38 No 57 0.44 No 0 0 No -25 0.9 Yes 45 85.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 80047978 + NM_002439 MSH3 1 1.78 0.94 42 0.81 66.26 37 5.67 Yes 63 -4.87 No 0 0 No -22 0.47 No 44 57.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 80057856 + NM_002439 MSH3 1 0.15 0.13 9 7.18 83.1 18 5.58 Yes 21 -2.07 No 0 0 No -33 0.51 No 53 31.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 80063847 + NM_002439 MSH3 1 0.18 0.13 9 5.78 78.2 28 6.39 Yes 15 1.02 Yes 0 0 No -27 0.57 No 43 64.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 80064711 + NM_002439 MSH3 1 0.51 0.38 21 -1.17 63.6 21 5.97 Yes 8 1.72 Yes 0 0 No -33 0.8 Yes 37 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 80074579 + NM_002439 MSH3 1 0.17 0.17 10 9.02 84.56 19 5.51 No 67 2.63 Yes 0 0 No -18 0.64 No 42 81.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 80086383 + NM_002439 MSH3 1 0.46 0.26 15 -0.37 60.6 38 7.3 Yes 25 0.87 Yes 0 0 No -37 0.69 Yes 33 87.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 80088045 + NM_002439 MSH3 1 0.14 0.11 7 3.12 81.62 47 6.44 Yes 29 1.07 Yes 0 0 No -24 0.76 Yes 46 90.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 80110543 + NM_002439 MSH3 1 0.43 0.25 17 11.62 80.74 28 6.32 Yes 15 0.75 No 0 0 No -27 0.89 Yes 43 74.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 80126455 + NM_002439 MSH3 1 0.25 0.13 8 9.49 92.78 18 6.38 Yes 5 0.72 No 0 0 No -30 0.71 Yes 40 76.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 80144266 + NM_002439 MSH3 1 1.54 0.85 41 8.66 89.56 12 5.12 No -1 0.69 No 0 0 No -34 0.32 No 42 48.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 80160671 + NM_002439 MSH3 1 0.36 0.21 10 6.35 78.16 29 6.73 Yes 16 1.8 Yes 0 0 No -28 0.75 Yes 42 62.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 80167994 + NM_002439 MSH3 1 2.96 1.51 51 11.2 87.36 24 7.9 Yes 11 0.88 Yes 0 0 No -28 0.47 No 47 59.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 80171573 + NM_002439 MSH3 1 1.18 0.68 35 -2.81 0 32 4.88 No 55 0.78 Yes 0 0 No -31 0.76 Yes 39 75.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48033922 + NM_001281494 MSH6 1 0.42 0.69 32 -2.65 0 48 8.38 Yes 72 -2.89 No 0 0 No -40 0.27 No 30 52.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 55334830 + NM_001322250 MSI2 1 0.67 1.11 43 3.02 0 77 10.45 Yes 64 0.99 Yes 0 0 No -28 0.48 No 22 69.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 55335632 + NM_001322250 MSI2 1 0.06 0.13 7 2.89 79.86 45 9.02 Yes 32 1.08 Yes 0 0 No -44 0.76 Yes 26 93.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55336336 + NM_001322250 MSI2 1 0.15 0.35 19 12.45 91.89 30 6.32 Yes 17 0.92 Yes 0 0 No -29 0.75 Yes 41 88.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55340848 + NM_001322250 MSI2 1 0.25 0.51 28 8.27 86.71 36 6.06 Yes 4 0.99 Yes 28 0.46 Yes -31 0.69 Yes 35 55.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 55351260 + NM_001322250 MSI2 1 0.08 0.17 11 8 95.56 15 6.53 Yes 2 1.27 Yes 0 0 No -24 0.9 Yes 46 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55351628 + NM_001322250 MSI2 1 17.52 32.57 72 11.72 95.96 45 5.6 Yes 67 1.87 Yes 31 0.79 Yes -31 0.73 Yes 39 61.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 55359015 + NM_001322250 MSI2 1 0.16 0.26 14 5.21 76.35 34 6.02 Yes 22 -1.43 No 0 0 No -34 0.64 No 36 74.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 55360212 + NM_001322250 MSI2 1 0.06 0.1 7 9.77 100 19 4.89 No 52 1.05 Yes 0 0 No -20 0.32 No 52 47.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 55370412 + NM_001322250 MSI2 1 0.28 0.54 33 9.13 87.01 26 5.29 No 38 0.6 No 0 0 No -25 0.46 No 45 68.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 55387488 + NM_001322250 MSI2 1 0.07 0.13 9 6.55 84.92 42 6.85 Yes 76 -4 No 0 0 No -22 0.64 No 48 78.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 55387491 + NM_001322250 MSI2 1 0.52 0.88 36 7.67 82.77 45 7.07 Yes 74 -3.49 No 0 0 No -25 0.72 Yes 45 77.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 55425249 + NM_001322250 MSI2 1 0.14 0.24 13 1.59 62.48 41 8.49 Yes 28 2.14 Yes 0 0 No -40 0.92 Yes 30 96.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55439699 + NM_001322250 MSI2 1 0.19 0.43 21 -1.03 82.73 44 6.93 Yes 69 0.63 No 0 0 No -33 0.43 No 37 53.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 55442282 + NM_001322250 MSI2 1 1.74 3.28 70 12.61 85.89 27 5.43 No 58 1.92 Yes 26 0.8 Yes -30 0.58 No 44 67.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 55448309 + NM_001322250 MSI2 1 0.46 0.93 38 5.99 94.25 24 5.1 No 34 0.79 Yes 0 0 No -23 0.95 Yes 47 96.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55472657 + NM_001322250 MSI2 1 0.06 0.11 8 6.32 73.78 23 5.19 No 65 0.79 Yes 0 0 No -27 0.46 No 43 47.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 55634350 + NM_001322250 MSI2 1 0.28 0.26 16 8.01 89.75 39 6.24 Yes 52 0.34 No 0 0 No -38 0.7 Yes 32 83.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 55643283 + NM_001322250 MSI2 1 0.36 0.35 20 9 93.87 21 5.52 No 8 1.15 Yes 24 0.77 Yes -20 0.56 No 50 69.42 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 55708442 + NM_001322250 MSI2 1 0.1 0.17 9 10.7 90.51 29 7.79 Yes 16 1.71 Yes 0 0 No -28 0.76 Yes 42 78.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55709151 + NM_001322250 MSI2 1 11.8 17.17 72 8.94 91.02 27 4.94 No 14 0.96 Yes 26 0.75 Yes -26 0.49 No 36 50.53 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 55709762 + NM_001322250 MSI2 1 0.89 1.25 49 5.53 78.89 25 7.12 Yes 12 1.55 Yes 0 0 No -24 0.81 Yes 46 71.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55752332 + NM_001322250 MSI2 1 1.33 0.1 7 9.49 87.65 34 6.74 Yes 70 0.69 No 33 0.5 Yes -33 0.91 Yes 37 87.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 55752332 + NM_001322250 MSI2 1 400.93 44.24 72 9.49 87.65 34 6.74 Yes 70 0.69 No 33 0.5 Yes -33 0.91 Yes 37 87.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 55756967 + NM_001322250 MSI2 1 1.46 1.51 48 5.89 77.16 18 4.9 No 5 0.89 Yes 0 0 No -17 0.87 Yes 53 82.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38290183 + NM_001012241 MSL1 1 0.17 0.22 14 13.92 94.03 29 5.91 Yes 75 0.9 Yes 0 0 No -23 0.42 No 45 50.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 135871870 - NM_018133 MSL2 1 0.08 0.1 7 7.37 81.66 51 5.43 No 12 1.63 Yes 0 0 No -24 0.82 Yes 46 91.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 11778934 + NM_006800 MSL3 1 0.02 0.14 7 4.45 71.54 29 5.65 Yes 69 0.51 No 28 0.92 Yes -28 0.89 Yes 42 94.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 11779643 + NM_006800 MSL3 1 0.06 0.19 10 1.55 76.69 21 4.87 No 8 0.39 No 0 0 No -20 0.75 Yes 50 65.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 11780249 + NM_006800 MSL3 1 0.04 0.11 8 -18.78 0 25 5.2 No 37 1.52 Yes 0 0 No -24 0.6 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 11783311 + NM_006800 MSL3 1 0.44 1.99 35 5.91 82.76 17 5.83 Yes 4 1.13 Yes 0 0 No -25 0.38 No 45 48.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 11783588 + NM_006800 MSL3 1 0.45 1.42 51 -9.4 73.8 24 6.37 Yes 11 1.23 Yes 0 0 No -23 0.87 Yes 47 90.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 11785079 + NM_006800 MSL3 1 2.21 3.63 67 8.61 87.67 25 7 Yes 12 1.49 Yes 0 0 No -24 0.87 Yes 46 91.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 11786688 + NM_006800 MSL3 1 0.31 0.53 29 -0.6 0 20 6.4 Yes 7 0.76 No 26 0.72 Yes -19 0.59 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 11786693 + NM_006800 MSL3 1 0.43 0.76 37 -7.49 73.72 25 6.77 Yes 12 0.73 No 0 0 No -24 0.64 No 46 54.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 166259046 + NM_006745 MSMO1 1 0.05 0.11 7 7.41 91.64 26 6.56 Yes 39 0.61 No 0 0 No -25 0.82 Yes 45 86.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 166261873 + NM_006745 MSMO1 1 0.05 0.25 15 4.52 85.54 30 3.31 No 3 1.51 Yes 0 0 No -29 0.42 No 45 44.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 64888211 + NM_002444 MSN 1 0.23 2.36 63 9.7 84.84 14 7.16 Yes 1 1.28 Yes 0 0 No -23 0.57 No 47 69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 64905207 + NM_002444 MSN 1 0.01 0.1 7 6.17 79.88 36 6.48 Yes 41 0.43 No 0 0 No -35 0.86 Yes 35 92.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 64916835 + NM_002444 MSN 1 0.02 0.25 15 8.1 90.74 16 6.48 Yes 3 1.36 Yes 0 0 No -32 0.71 Yes 38 62.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 64921374 + NM_002444 MSN 1 0.68 6.86 72 9.13 86.77 33 6.11 Yes 61 0.82 Yes 0 0 No -32 0.73 Yes 38 52.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 64923447 + NM_002444 MSN 1 0.19 1.94 63 10.03 98.73 39 6.16 Yes 73 -1.11 No 0 0 No -33 0.34 No 37 67.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 64923467 + NM_002444 MSN 1 0.05 0.47 22 7.3 90.11 25 5.39 No 12 0.69 No 0 0 No -24 0.92 Yes 46 89.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 64927551 + NM_002444 MSN 1 0.02 0.28 20 9.76 88.3 26 4.39 No 29 -1.16 No 0 0 No -19 0.4 No 48 51.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 64936684 + NM_002444 MSN 1 0.05 0.56 30 1.17 0 32 6.73 Yes 19 2.37 Yes 0 0 No -31 0.88 Yes 39 93.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 64949311 + NM_002444 MSN 1 0.04 0.53 26 0.68 0 10 4.28 No 17 1.67 Yes 0 0 No -39 0.52 No 31 54.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 64950970 + NM_002444 MSN 1 0.03 0.22 15 -6.34 76.13 23 6.83 Yes 10 1.04 Yes 0 0 No -22 0.83 Yes 48 80.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 64956317 + NM_002444 MSN 1 0.01 0.14 7 11.23 88.27 23 5.39 No 67 -2.18 No 0 0 No -22 0.38 No 48 68.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 10211125 + NM_001135670 MSRA 1 0.9 0.17 10 9.6 86.54 17 5.18 No 60 1.71 Yes 20 0.24 Yes -20 0.75 Yes 50 87.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 10268648 + NM_001135670 MSRA 1 3.88 0.68 33 1.57 70.19 41 5.57 Yes 38 1.96 Yes 0 0 No -40 0.81 Yes 30 85.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 10006657 + NM_001135670 MSRA 1 3.28 0.5 29 8.25 84.58 27 7.62 Yes 14 2.12 Yes 0 0 No -26 0.93 Yes 44 96.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 1991169 - NM_016332 MSRB1 1 0.24 0.19 12 10.59 83.86 28 6.3 Yes 74 -3.11 No 27 0.78 Yes -27 0.73 Yes 43 70.34 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 23385059 + NM_012228 MSRB2 1 0.63 0.1 7 5.72 86.8 18 4.9 No NA NA NA 0 0 No -26 0.39 No 44 35.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 23407974 + NM_012228 MSRB2 1 0.83 0.46 25 6.66 76.73 23 5.83 Yes 40 0.61 No 22 0.8 Yes -22 0.95 Yes 48 93.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155581711 + NR_046294 MSTO1 1 1.95 0.14 8 10.52 86.75 27 5.74 Yes 14 0.25 No 26 0.8 Yes -26 0.6 No 44 82.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 155582596 + NR_046294 MSTO1 1 0.69 0.71 27 8.37 93.75 30 8.26 Yes 45 1.56 Yes 29 0.87 Yes -29 0.9 Yes 41 91.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155582657 + NR_046294 MSTO1 1 0.54 0.58 27 8.83 82.97 28 5.66 Yes 15 0.6 No 0 0 No -27 0.95 Yes 43 97.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155582882 + NR_046294 MSTO1 1 0.37 0.31 18 9.3 87.47 23 5.96 Yes 55 1.32 Yes 0 0 No -26 0.59 No 48 67.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155583852 + NR_046294 MSTO1 1 0.84 0.51 30 3.94 78.45 37 4.24 No 31 0.72 No 27 0.7 Yes -30 0.71 Yes 40 76.09 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 155718438 + NR_024117 MSTO2P 1 4.25 0.32 14 9.3 87.47 23 5.96 Yes 55 1.37 Yes 26 0.55 Yes -26 0.57 No 48 66.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 155719121 + NR_024117 MSTO2P 1 1.37 0.21 13 -2.92 0 32 6.63 Yes 19 1.27 Yes 0 0 No -31 0.93 Yes 39 94.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56717505 + NM_005952 MT1X 1 0.09 0.13 7 8.11 93.1 23 4.24 No 10 1 Yes 0 0 No -22 0.87 Yes 48 87.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56643141 + NM_005953 MT2A 1 0.04 0.35 10 4.04 63.64 18 5.83 Yes 24 -1.45 No 28 0.94 Yes -17 0.54 No 53 63.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 56643219 + NM_005953 MT2A 1 0.06 0.29 16 -9.75 0 13 4.3 No 61 1.28 Yes 0 0 No -35 0.34 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 105906975 + NM_004689 MTA1 1 0.55 0.47 25 7.55 79.61 23 5.2 No 10 0.79 Yes 0 0 No -22 0.96 Yes 48 88.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105907080 + NM_004689 MTA1 1 0.2 0.18 10 4.17 83.44 32 6.01 Yes 19 -0.38 No 0 0 No -19 0.51 No 39 54.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 105912003 + NM_004689 MTA1 1 3.98 2.1 63 11.24 82.73 32 9.27 Yes 19 1.26 Yes 31 0.93 Yes -31 0.98 Yes 39 96.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105915481 + NM_004689 MTA1 1 0.19 0.1 7 4.52 73.76 32 5.57 Yes NA NA NA 0 0 No -29 0.78 Yes 41 78.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 105916609 + NM_004689 MTA1 1 0.49 0.79 37 -6.78 0 15 4.58 No NA NA NA 0 0 No -36 0.79 Yes 34 86.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 105920551 + NM_004689 MTA1 1 0.17 0.31 18 8.27 80.42 25 5.57 Yes 41 2.47 Yes 0 0 No -24 0.43 No 46 61.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 105920964 + NM_004689 MTA1 1 1.33 2.26 60 10.89 94.53 34 5.78 Yes 36 1.59 Yes 28 0.46 Yes -28 0.73 Yes 42 87.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105921268 + NM_004689 MTA1 1 0.08 0.14 8 5.87 82.31 34 4.46 No 11 0.47 No 0 0 No -26 0.9 Yes 44 82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 105924525 + NM_004689 MTA1 1 0.46 0.76 41 9.09 77.25 29 5.75 Yes 31 0.83 Yes 0 0 No -27 0.75 Yes 43 85.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105927050 + NM_004689 MTA1 1 0.22 0.42 24 3.31 78.32 24 5.1 No 67 -4.45 No 0 0 No -23 0.85 Yes 47 83.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 105930799 + NM_004689 MTA1 1 10.51 14.46 72 3.81 74.88 36 6.24 Yes -4 1.09 Yes 26 0.59 Yes -35 0.95 Yes 35 97.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105934674 + NM_004689 MTA1 1 0.3 0.33 20 4.53 73.11 47 6.82 Yes 34 2.04 Yes 26 0.52 Yes -46 0.72 Yes 24 91.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 105936405 + NM_004689 MTA1 1 0.31 0.4 24 -2.8 0 25 6.78 Yes 12 1.73 Yes 0 0 No -24 0.95 Yes 46 92.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62361547 - NM_001330292 MTA2 1 0.06 0.33 19 1.04 72.15 27 5.08 No 0 0.89 Yes 36 0.77 Yes -26 0.94 Yes 44 91.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 62362900 - NM_001330292 MTA2 1 0.03 0.17 11 5.39 73.01 26 5.48 No 42 0.42 No 0 0 No -25 0.93 Yes 45 91.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62363404 - NM_001330292 MTA2 1 0.04 0.26 15 -10.42 0 15 4.58 No 63 -4.59 No 30 0.61 Yes -14 0.57 No 56 29.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 62363619 - NM_001330292 MTA2 1 0.02 0.14 9 7.13 86.82 19 4.56 No 70 1.95 Yes 44 0.58 Yes -31 0.51 No 39 51.71 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 62363808 - NM_001330292 MTA2 1 0.02 0.15 10 -14.51 0 33 6.85 Yes 67 2.34 Yes 0 0 No -32 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 62363809 - NM_001330292 MTA2 1 0.04 0.29 18 -12.1 0 32 6.77 Yes 66 2.35 Yes 0 0 No -31 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 62364297 - NM_001330292 MTA2 1 0.03 0.19 11 -12.49 0 26 5.66 Yes 13 0.85 Yes 0 0 No -25 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 62364886 - NM_001330292 MTA2 1 0.17 1.14 46 1.05 78.69 42 7.84 Yes 29 1.5 Yes 0 0 No -23 0.75 Yes 47 80.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62365182 - NM_001330292 MTA2 1 0.06 0.44 21 -7.05 77.52 26 8.19 Yes 13 1.36 Yes 0 0 No -25 0.78 Yes 45 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62366086 - NM_001330292 MTA2 1 0.02 0.11 8 -7.77 0 18 4.58 No 43 1.98 Yes 0 0 No -55 0.88 Yes 15 88.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62367682 - NM_001330292 MTA2 1 0.04 0.24 15 9.21 91.36 27 5.66 Yes 40 -1.51 No 0 0 No -27 0.62 No 43 57.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62367786 - NM_001330292 MTA2 1 0.02 0.1 7 10.08 90.04 37 6.83 Yes 30 1.32 Yes 0 0 No -36 0.94 Yes 34 96.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 42808924 + NM_001282755 MTA3 1 1.36 1.29 48 7.44 86.88 33 5.84 Yes 66 -3.18 No 33 0.62 Yes -32 0.66 No 38 71.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 42811317 + NM_001282755 MTA3 1 0.35 0.33 21 5.04 92.61 25 7.32 Yes 41 0.14 No 0 0 No -25 0.74 Yes 45 66.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 42814758 + NM_001282755 MTA3 1 0.23 0.22 15 0.1 83 24 6.99 Yes 11 0.48 No 0 0 No -27 0.83 Yes 43 84.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 42814762 + NM_001282755 MTA3 1 0.76 0.71 34 2.06 0 28 7.16 Yes 15 0.49 No 0 0 No -31 0.82 Yes 39 82.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 42829301 + NM_001282755 MTA3 1 0.5 0.49 26 8.51 86.62 21 5.83 Yes 8 1.27 Yes 0 0 No -20 0.84 Yes 50 88.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 42836600 + NM_001282755 MTA3 1 0.16 0.17 8 -2.05 72.45 32 7.56 Yes 19 0.76 No 0 0 No -31 0.91 Yes 39 92.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 42841257 + NM_001282755 MTA3 1 0.22 0.14 8 -1.01 82.42 23 5.17 No 10 0.87 Yes 0 0 No -26 0.49 No 48 69.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 42906862 + NM_001282755 MTA3 1 0.13 0.13 8 6.07 75.74 27 5.58 Yes 72 0.25 No 0 0 No -26 0.45 No 44 58.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 42913073 + NM_001282755 MTA3 1 1.04 0.76 36 4.74 81.4 28 6.56 Yes 15 0.78 Yes 0 0 No -32 0.38 No 43 32.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 42925095 + NM_001282755 MTA3 1 0.37 0.15 9 5.16 75.25 32 6.99 Yes 19 0.58 No 0 0 No -31 0.79 Yes 39 79.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 42925554 + NM_001282755 MTA3 1 3.33 1.38 47 -4.37 75.59 46 8.08 Yes 33 0.69 No 21 0.43 Yes -39 0.56 No 32 61.24 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 42930739 + NM_001282755 MTA3 1 0.52 0.21 13 5.4 74.16 19 6.41 Yes 6 1.3 Yes 0 0 No -28 0.63 No 42 68.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 42931333 + NM_001282755 MTA3 1 123.09 51.01 72 1.68 68.48 64 5.11 No 12 0.63 No 27 0.61 Yes -27 0.69 Yes 43 53.21 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 42960823 + NM_001282755 MTA3 1 3.12 0.35 20 8.57 86.52 59 7.15 Yes 69 0.88 Yes 0 0 No -46 0.42 No 39 56.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 42974162 + NM_001282755 MTA3 1 1.8 0.22 16 3.85 84.41 23 6.08 Yes 10 1.45 Yes 0 0 No -22 0.91 Yes 48 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21803745 + NM_002451 MTAP 1 1.51 0.86 35 8.7 82.33 27 5.74 Yes 14 0.3 No 0 0 No -26 0.8 Yes 44 81.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21808805 + NM_002451 MTAP 1 0.94 0.57 27 6.36 87.95 38 6.19 Yes 0 0.72 No 37 0.44 Yes -37 0.76 Yes 33 82.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 21856114 + NM_002451 MTAP 1 0.65 0.82 41 2.61 60.48 50 10.06 Yes 59 1.63 Yes 29 0.66 Yes -43 0.46 No 27 62.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 21861765 + NM_002451 MTAP 1 0.37 0.43 24 10.29 89.83 15 5.5 No 2 1.57 Yes 29 0.77 Yes -29 0.59 No 41 60.19 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 121463847 + NM_022045 MTBP 1 0.37 0.11 8 8 87.09 26 6.82 Yes 13 1.42 Yes 0 0 No -25 0.56 No 45 78.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 121469816 + NM_022045 MTBP 1 0.5 0.14 9 6.26 78.86 30 5.88 Yes 1 1.22 Yes 0 0 No -29 0.78 Yes 41 72.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 121475926 + NM_022045 MTBP 1 2.44 0.64 34 5.35 77.26 24 5.4 No -3 0.46 No 35 0.6 Yes -26 0.49 No 44 61.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 121475933 + NM_022045 MTBP 1 1.29 0.4 20 -9.94 0 17 4 No 18 0.39 No 0 0 No -28 0.47 No 28 72.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 121476373 + NM_022045 MTBP 1 0.91 0.32 20 10.42 90.65 30 6.63 Yes 62 1.73 Yes 0 0 No -29 0.84 Yes 41 80.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 121480666 + NM_022045 MTBP 1 3.36 1.25 56 5.09 83.8 27 3.75 No 72 0.5 No 0 0 No -23 0.75 Yes 47 72.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 121483967 + NM_022045 MTBP 1 2.29 0.6 29 10.28 85.59 35 8.16 Yes 22 1.37 Yes 0 0 No -21 0.55 No 49 60.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 121484782 + NM_022045 MTBP 1 0.88 0.21 9 9.1 88.54 24 5.12 No 11 0.79 Yes 0 0 No -23 0.74 Yes 43 67.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 121487429 + NM_022045 MTBP 1 1.48 0.38 22 11.67 91.99 16 5.32 No 30 1.14 Yes 0 0 No -26 0.71 Yes 44 95.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 121504487 + NM_022045 MTBP 1 0.75 0.19 14 7.08 88.23 23 6.04 Yes 10 0.93 Yes 0 0 No -26 0.9 Yes 44 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36937191 - NM_014341 MTCH1 1 0.04 0.1 7 6.22 82.29 44 6.69 Yes 1 0.54 No 0 0 No -29 0.39 No 40 36.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36937560 - NM_014341 MTCH1 1 0.05 0.13 7 -1.09 0 11 4.12 No 49 0.61 No 0 0 No -32 0.47 No 38 65.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36937859 - NM_014341 MTCH1 1 0.46 0.9 39 8.71 81.83 27 5.74 Yes -3 0.41 No 0 0 No -27 0.76 Yes 43 63.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 36938267 - NM_014341 MTCH1 1 0.09 0.17 8 1.18 78.58 13 8.06 Yes 70 -1.05 No 19 0.7 Yes -58 0.54 No 23 43.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 36944375 - NM_014341 MTCH1 1 0.13 0.22 12 8.16 86.54 28 6.23 Yes 55 -0.4 No 27 0.9 Yes -27 0.92 Yes 43 91.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 36944580 - NM_014341 MTCH1 1 0.11 0.13 7 3.87 74.62 26 5.48 No 39 1.75 Yes 0 0 No -25 0.78 Yes 45 90.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36944609 - NM_014341 MTCH1 1 0.16 0.24 13 6.99 78.17 23 5.81 Yes 10 1.77 Yes 0 0 No -30 0.58 No 40 77.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 36945001 - NM_014341 MTCH1 1 0.12 0.24 12 1.97 70.37 25 4.63 No 44 0.75 No 0 0 No -56 0.79 Yes 14 82.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 36945536 - NM_014341 MTCH1 1 0.19 0.39 21 0.54 0 12 4.24 No -1 0.11 No 0 0 No -11 0.51 No 40 43.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36945561 - NM_014341 MTCH1 1 0.3 0.67 30 3.09 0 21 4.58 No NA NA NA 0 0 No -20 0.67 Yes 50 57.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 36945573 - NM_014341 MTCH1 1 0.08 0.19 12 3.02 70.62 14 5.1 No NA NA NA 0 0 No -19 0.54 No 51 47.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 47644279 - NM_001317232 MTCH2 1 0.07 0.42 20 2.35 69.14 28 7.44 Yes 71 0.9 Yes 0 0 No -27 0.81 Yes 43 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47644352 - NM_001317232 MTCH2 1 0.06 0.4 21 0.17 58.73 30 5.13 No -2 0.23 No 28 0.38 Yes -29 0.52 No 41 42.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 47647292 - NM_001317232 MTCH2 1 0.02 0.15 9 -27.86 0 29 4.6 No 16 1.11 Yes 0 0 No -31 0.66 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 47647293 - NM_001317232 MTCH2 1 0.08 0.44 23 -11.99 0 28 4.53 No 15 1.11 Yes 0 0 No -30 0.69 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 47647316 - NM_001317232 MTCH2 1 0.09 0.47 17 0.25 73.21 26 5.04 No 34 -4.05 No 29 0.91 Yes -25 0.49 No 54 20.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 47647420 - NM_001317232 MTCH2 1 0.23 1.22 44 10.42 97.39 17 6 Yes 4 1.61 Yes 0 0 No -25 0.87 Yes 45 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47650576 - NM_001317232 MTCH2 1 0.26 1.03 49 11.54 84.04 30 5.66 Yes 53 1.54 Yes 0 0 No -29 0.88 Yes 41 79.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47650576 - NM_001317232 MTCH2 1 0.03 0.11 8 11.54 84.04 30 5.66 Yes 53 1.54 Yes 0 0 No -29 0.88 Yes 41 79.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47650864 - NM_001317232 MTCH2 1 0.12 0.47 20 9.34 83.27 25 4.65 No 37 0.12 No 0 0 No -25 0.45 No 47 35.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 47657124 - NM_001317232 MTCH2 1 1244.1 327.36 72 10.2 85.42 33 6.45 Yes 14 1.89 Yes 26 0.88 Yes -26 0.57 No 44 55.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 98673584 + NM_178812 MTDH 1 0.03 0.22 10 10.04 88.28 27 4.81 No 14 0.97 Yes 0 0 No -26 0.62 No 44 91.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 98703180 + NM_178812 MTDH 1 0.04 0.36 21 -8.05 0 25 6.62 Yes 12 0.76 No 0 0 No -24 0.65 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 98703188 + NM_178812 MTDH 1 0.65 5.81 70 4.82 0 12 3.66 No 20 0.74 No 0 0 No -32 0.59 No 38 77.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 98708431 + NM_178812 MTDH 1 2.45 20.83 72 8.63 91.63 20 5.48 No 7 0.98 Yes 0 0 No -24 0.71 Yes 46 63.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 107372546 - NM_025198 MTERF2 1 2.38 0.42 23 3.2 0 30 7.3 Yes 17 0.83 Yes 25 0.82 Yes -29 0.69 Yes 41 66.53 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 107374492 - NM_025198 MTERF2 1 3.08 0.5 23 11.55 94.44 37 5.16 No 67 -3.32 No 28 0.56 Yes -28 0.56 No 42 45.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 97263222 - NM_001286643 MTERF3 1 0.41 0.42 19 7.25 82.15 25 5.53 No 12 0.42 No 0 0 No -24 0.78 Yes 46 85.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 97269308 - NM_001286643 MTERF3 1 0.81 0.92 39 6.05 81.11 27 6.63 Yes 44 1.47 Yes 25 0.28 Yes -25 0.49 No 45 52.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 97270497 - NM_001286643 MTERF3 1 0.34 0.43 19 4.14 0 13 4.36 No 67 0.68 No 0 0 No -35 0.34 No 36 46.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 97272433 - NM_001286643 MTERF3 1 0.37 0.22 15 6.82 72.09 25 6.78 Yes 51 1.11 Yes 0 0 No -24 0.93 Yes 46 92.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 97272473 - NM_001286643 MTERF3 1 0.34 0.21 13 4.25 83.68 24 5.29 No 11 1.09 Yes 0 0 No -23 0.91 Yes 47 95.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 97272476 - NM_001286643 MTERF3 1 1.81 1.1 46 -2.33 73.95 21 5 No 8 1.09 Yes 20 0.96 Yes -20 0.9 Yes 50 94.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 242024791 - NR_138463 MTERF4 1 1.43 0.13 8 5.9 90.48 21 5.44 No 5 0.37 No 0 0 No -20 0.88 Yes 50 82.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242029815 - NR_138463 MTERF4 1 1.23 0.31 19 3.01 71.54 19 5.37 No 51 0.17 No 0 0 No -18 0.78 Yes 52 61.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 242029865 - NR_138463 MTERF4 1 0.32 0.1 7 7.75 75.7 26 7.85 Yes 1 0.2 No 25 0.81 Yes -25 0.77 Yes 45 80.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 242033845 - NR_138463 MTERF4 1 1.8 1.25 46 6.58 87.99 31 5.57 Yes 18 0.75 No 27 0.78 Yes -30 0.84 Yes 40 40.47 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 242033845 - NR_138463 MTERF4 1 0.37 0.26 13 6.58 87.99 31 5.57 Yes 18 0.75 No 27 0.78 Yes -30 0.84 Yes 40 40.47 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 242033848 - NR_138463 MTERF4 1 16.11 10.89 72 7.45 91.85 28 5.29 No 15 0.74 No 27 0.78 Yes -27 0.88 Yes 43 49.89 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 242033848 - NR_138463 MTERF4 1 0.79 0.58 31 7.45 91.85 28 5.29 No 15 0.74 No 27 0.78 Yes -27 0.88 Yes 43 49.89 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 242033848 - NR_138463 MTERF4 1 5.7 3.82 61 7.45 91.85 28 5.29 No 15 0.74 No 27 0.78 Yes -27 0.88 Yes 43 49.89 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 242037239 - NR_138463 MTERF4 1 0.37 0.35 21 3.55 84.81 16 6.37 Yes 3 1.11 Yes 0 0 No -19 0.84 Yes 51 52.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 242038347 - NR_138463 MTERF4 1 0.16 0.14 8 4.31 85.2 23 4.81 No 76 -5.65 No 0 0 No -17 0.55 No 53 55.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 242040637 - NR_138463 MTERF4 1 0.61 0.33 17 8.66 75.4 39 6.3 Yes 26 1.05 Yes 21 0.83 Yes -38 0.5 No 39 55.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 38283152 - NM_005955 MTF1 1 2.24 1.4 48 7.03 90.68 30 4.11 No 17 0.25 No 0 0 No -30 0.78 Yes 40 81.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 38283771 - NM_005955 MTF1 1 0.17 0.13 7 10.51 95.46 20 5.2 No 57 -2.25 No 0 0 No -26 0.63 No 51 56.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 38310661 - NM_005955 MTF1 1 0.21 0.15 11 8.84 91.64 24 5.02 No 35 0.08 No 0 0 No -23 0.95 Yes 47 97.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 38312161 - NM_005955 MTF1 1 0.45 0.26 17 9.9 88.11 30 6.78 Yes 17 2.05 Yes 0 0 No -29 0.83 Yes 41 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38313051 - NM_005955 MTF1 1 0.38 0.25 15 -5.38 0 17 4.36 No 41 0.37 No 0 0 No -54 0.43 No 54 38.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 38324246 - NM_005955 MTF1 1 0.98 0.49 23 8.12 80.58 29 5.02 No 16 1.14 Yes 19 0.72 Yes -29 0.5 No 41 63.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 93550284 + NM_007358 MTF2 1 0.79 0.96 42 -1.06 0 48 6.77 Yes 51 0.67 No 0 0 No -32 0.41 No 31 54.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 93574192 + NM_007358 MTF2 1 0.09 0.11 7 11.07 92.48 34 6.24 Yes 74 1 Yes 0 0 No -33 0.74 Yes 37 75.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93575883 + NM_007358 MTF2 1 0.99 1.21 45 6.87 0 19 4.58 No 6 1.11 Yes 18 0.9 Yes -18 0.91 Yes 52 92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 93582085 + NM_007358 MTF2 1 0.26 0.15 10 5.6 0 31 6.07 Yes 55 1.54 Yes 0 0 No -31 0.49 No 39 66.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 93585519 + NM_007358 MTF2 1 0.36 0.46 25 4.32 81.56 25 4.83 No 42 -1.59 No 0 0 No -24 0.83 Yes 46 76.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93586351 + NM_007358 MTF2 1 0.44 0.61 30 3.06 79.63 21 4.8 No 74 0.97 Yes 18 0.86 Yes -20 0.85 Yes 50 82.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 93590034 + NM_007358 MTF2 1 0.07 0.11 7 8.74 74.39 29 6.63 Yes 16 1.42 Yes 0 0 No -28 0.73 Yes 42 69.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93592758 + NM_007358 MTF2 1 0.25 0.36 18 -0.42 62.69 17 6.27 Yes 68 0.85 Yes 24 0.58 Yes -16 0.43 No 36 65.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 65310125 - NM_139242 MTFMT 1 0.24 0.14 8 3.13 0 42 6.56 Yes 29 0.15 No 0 0 No -41 0.37 No 29 56.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 65311618 - NM_139242 MTFMT 1 0.21 0.11 8 9.62 88.21 18 5.48 No 5 1.38 Yes 0 0 No -28 0.44 No 42 62.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65316109 - NM_139242 MTFMT 1 2.48 2.06 63 3.81 76.83 31 5.7 Yes 42 1.46 Yes 0 0 No -30 0.86 Yes 40 90.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65317567 - NM_139242 MTFMT 1 1.7 1.38 50 11.15 88.27 29 6.32 Yes 16 2.35 Yes 0 0 No -28 0.9 Yes 42 96.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 30823088 + NM_016498 MTFP1 1 0.56 0.47 25 7.66 72.45 28 4.67 No NA NA NA 22 0.87 Yes -27 0.5 No 47 47.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 30823108 + NM_016498 MTFP1 1 2.39 1.76 56 8.25 85.17 23 5.39 No NA NA NA 22 0.87 Yes -22 0.67 Yes 48 77.85 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 30823226 + NM_016498 MTFP1 1 15.43 11.57 72 4.71 88.46 34 6.78 Yes 21 0.27 No 33 0.65 Yes -33 0.89 Yes 37 85.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 66561460 + NM_001145839 MTFR1 1 1.64 0.32 19 8.59 93.31 28 5.29 No 57 -1.19 No 0 0 No -27 0.51 No 16 69.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 66574699 + NM_001145839 MTFR1 1 2.56 0.39 22 4.26 80.01 32 6.85 Yes 61 -2.33 No 0 0 No -31 0.83 Yes 39 63.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 66594278 + NM_001145839 MTFR1 1 0.32 0.11 8 7.17 92.85 21 4.8 No 62 -4.53 No 21 0.42 Yes -20 0.37 No 49 42.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 66595077 + NM_001145839 MTFR1 1 0.5 0.25 15 11.22 84.61 27 6.08 Yes 39 0.54 No 0 0 No -26 0.39 No 44 58.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 66601800 + NM_001145839 MTFR1 1 0.71 0.36 19 4.57 65.42 31 10.03 Yes 18 0.93 Yes 30 0.83 Yes -30 0.84 Yes 40 57.38 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 66606182 + NM_001145839 MTFR1 1 0.34 0.18 12 8.99 95.32 27 5.74 Yes 73 1.45 Yes 0 0 No -26 0.86 Yes 44 83.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 66616933 + NM_001145839 MTFR1 1 0.38 0.21 14 0.8 0 33 5.99 Yes 20 1.13 Yes 0 0 No -32 0.62 No 38 86.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 66620082 + NM_001145839 MTFR1 1 0.6 0.36 21 -1.47 0 40 7.42 Yes 27 1.22 Yes 34 0.56 Yes -39 0.91 Yes 31 93.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 26156035 + NM_001099626 MTFR1L 1 6.52 3.58 69 7.12 97.45 23 4.9 No 10 1.39 Yes 22 0.93 Yes -22 0.91 Yes 48 92.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 26156108 + NM_001099626 MTFR1L 1 15.53 8.85 72 5.55 77.9 49 5.82 Yes 36 1.4 Yes 30 0.81 Yes -30 0.82 Yes 40 87.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 26156177 + NM_001099626 MTFR1L 1 0.47 0.28 16 7.88 88.59 25 5.53 No 22 1.64 Yes 27 0.7 Yes -29 0.57 No 46 70.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 136561205 - NM_138419 MTFR2 1 0.26 0.13 7 9.26 83.56 29 6.99 Yes 75 0.85 Yes 0 0 No -28 0.77 Yes 42 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 136562226 - NM_138419 MTFR2 1 1.96 0.76 38 3.97 84.41 28 4 No 11 0.86 Yes 0 0 No -27 0.68 Yes 43 77.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 136568699 - NM_138419 MTFR2 1 2.33 1.19 38 10.24 82.08 16 4.67 No 27 0.02 No 22 0.59 Yes -22 0.63 No 44 80.52 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 135212602 + NM_138384 MTG1 1 0.17 0.26 13 0.22 74.09 14 6.08 Yes 1 1.68 Yes 0 0 No -21 0.38 No 49 53.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 135216144 + NM_138384 MTG1 1 1.16 1.47 52 4.7 84.5 11 5.48 No 41 0.9 Yes 0 0 No -24 0.8 Yes 46 62.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 135216168 + NM_138384 MTG1 1 0.32 0.38 24 3.99 78.23 23 4.98 No 65 0.91 Yes 0 0 No -23 0.67 Yes 47 49.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 135216362 + NM_138384 MTG1 1 0.21 0.17 9 -0.57 58 41 6.87 Yes 19 -3.1 No 0 0 No -31 0.65 No 35 26.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 135216408 + NM_138384 MTG1 1 6.45 5.5 66 3.95 68.97 20 6.64 Yes 7 0.61 No 0 0 No -19 0.48 No 51 59.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 60763845 + NM_015666 MTG2 1 6.01 0.67 31 11.51 94.39 26 6.75 Yes 13 0.59 No 25 0.79 Yes -31 0.58 No 45 55.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 60769932 + NM_015666 MTG2 1 0.18 0.13 8 8.56 88.44 29 6.21 Yes 54 1.97 Yes 0 0 No -28 0.64 No 42 76.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 60772508 + NM_015666 MTG2 1 1.63 0.97 42 9.18 93.85 32 6.64 Yes 19 0.42 No 0 0 No -31 0.5 No 42 55.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 60772823 + NM_015666 MTG2 1 0.22 0.13 8 9.62 81.51 85 6.92 Yes 16 1.91 Yes 0 0 No -28 0.83 Yes 42 82.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60775124 + NM_015666 MTG2 1 0.83 0.57 29 8.4 75.32 29 5.1 No 49 0.72 No 0 0 No -46 0.57 No 48 54.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64857054 + NM_005956 MTHFD1 1 0.33 1.24 52 6.71 78.3 33 7.2 Yes 20 1.07 Yes 28 0.9 Yes -28 0.84 Yes 42 87.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 64878083 + NM_005956 MTHFD1 1 0.09 0.4 21 4.61 80.93 19 6.22 Yes 6 0.9 Yes 0 0 No -22 0.97 Yes 48 94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64878088 + NM_005956 MTHFD1 1 0.03 0.17 7 -1.12 0 24 6.57 Yes 11 0.87 Yes 0 0 No -27 0.95 Yes 43 91.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64878128 + NM_005956 MTHFD1 1 0.26 1.21 45 5.53 79.01 21 4.9 No 51 0.85 Yes 0 0 No -20 0.87 Yes 50 81.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64881395 + NM_005956 MTHFD1 1 0.04 0.14 8 6.4 88.76 23 6 Yes 10 1.7 Yes 0 0 No -22 0.82 Yes 48 83.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64882365 + NM_005956 MTHFD1 1 0.2 0.79 41 -2.33 0 12 3.72 No 37 1.71 Yes 0 0 No -49 0.88 Yes 21 93.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64884588 + NM_005956 MTHFD1 1 0.11 0.33 18 5.85 79.3 13 5.2 No 44 1.1 Yes 23 0.93 Yes -27 0.43 No 50 48.71 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 64894304 + NM_005956 MTHFD1 1 0.08 0.29 14 5.51 82.29 30 5.77 Yes 72 1.09 Yes 0 0 No -29 0.94 Yes 41 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64894369 + NM_005956 MTHFD1 1 0.34 1.15 46 6.54 80.54 28 4.63 No 24 0.54 No 0 0 No -27 0.83 Yes 43 82.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64898250 + NM_005956 MTHFD1 1 0.05 0.25 13 -12.02 0 25 6.08 Yes 12 1.49 Yes 0 0 No -24 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 64902288 + NM_005956 MTHFD1 1 0.03 0.13 8 -1.98 71.76 60 7.65 Yes 47 1.02 Yes 0 0 No -33 0.9 Yes 37 86.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64904154 + NM_005956 MTHFD1 1 0.05 0.35 16 6.43 76.28 36 7.34 Yes 23 0.68 No 0 0 No -28 0.67 Yes 35 52.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 64911834 + NM_005956 MTHFD1 1 0.05 0.18 11 5.27 86.38 20 6.86 Yes -4 0.24 No 0 0 No -19 0.62 No 51 66.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64914693 + NM_005956 MTHFD1 1 0.04 0.15 9 6.13 89.4 20 5.1 No 65 1.18 Yes 0 0 No -22 0.45 No 51 61.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 64925146 + NM_005956 MTHFD1 1 0.03 0.11 7 6.47 90.42 26 8.24 Yes 36 1.28 Yes 25 0.92 Yes -25 0.84 Yes 45 93.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 151200949 + NM_015440 MTHFD1L 1 0.08 0.15 9 6.22 82.64 19 5.47 No 6 1.03 Yes 0 0 No -18 0.51 No 52 86.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 151208977 + NM_015440 MTHFD1L 1 0.29 0.21 13 1.52 74.14 24 4.84 No 71 0.75 No 29 0.6 Yes -24 0.48 No 47 61.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 151208977 + NM_015440 MTHFD1L 1 113.79 74.22 72 1.52 74.14 24 4.84 No 71 0.75 No 29 0.6 Yes -24 0.48 No 47 61.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 151213045 + NM_015440 MTHFD1L 1 0.12 0.18 9 8.69 91.35 26 5.25 No -3 0.37 No 0 0 No -25 0.71 Yes 45 61.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 151219396 + NM_015440 MTHFD1L 1 0.06 0.11 7 2.5 74.62 34 7.25 Yes 21 0.28 No 0 0 No -33 0.73 Yes 37 83.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 151219995 + NM_015440 MTHFD1L 1 20.42 33.47 72 9.83 94.56 30 4.37 No 33 0.43 No 29 0.33 Yes -26 0.41 No 44 64.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 151233803 + NM_015440 MTHFD1L 1 1.28 1.5 45 9.2 94.82 31 6.5 Yes 18 1.16 Yes 30 0.48 Yes -30 0.84 Yes 40 89.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 151255794 + NM_015440 MTHFD1L 1 1 1.39 52 8.73 75.33 33 6.16 Yes 29 0.74 No 0 0 No -32 0.86 Yes 38 84.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 151270985 + NM_015440 MTHFD1L 1 0.94 1.13 45 2.57 76.69 47 7.27 Yes 34 1.32 Yes 0 0 No -23 0.72 Yes 47 65.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 151273692 + NM_015440 MTHFD1L 1 0.13 0.14 8 2 0 31 6.59 Yes 53 1.54 Yes 0 0 No -30 0.91 Yes 40 92.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 151304969 + NM_015440 MTHFD1L 1 3.18 1.79 60 7.84 90.72 27 5.2 No 58 1.04 Yes 0 0 No -26 0.67 Yes 44 42.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 151306174 + NM_015440 MTHFD1L 1 0.32 0.13 9 6.62 85.27 31 5.49 No 47 1.02 Yes 25 0.34 Yes -25 0.46 No 41 43.19 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 151306185 + NM_015440 MTHFD1L 1 1.06 0.65 32 2.69 0 20 4.47 No 58 1.02 Yes 0 0 No -19 0.73 Yes 51 47.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 151343140 + NM_015440 MTHFD1L 1 0.24 0.38 19 8.9 82.97 9 5.29 No 74 0.21 No 28 0.63 Yes -23 0.52 No 47 76.63 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 151378374 + NM_015440 MTHFD1L 1 0.58 0.6 34 6.91 78.41 81 5.09 No 68 1.72 Yes 0 0 No -21 0.73 Yes 34 67.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 151409788 + NM_015440 MTHFD1L 1 1.58 1.88 55 8.28 87.44 31 6.48 Yes 18 1.42 Yes 0 0 No -30 0.85 Yes 40 95.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 151414049 + NM_015440 MTHFD1L 1 0.16 0.15 7 10.08 98.25 16 5.58 Yes 8 0.96 Yes 0 0 No -33 0.41 No 49 60.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 151417221 + NM_015440 MTHFD1L 1 0.26 0.21 13 6.14 89.2 23 4.68 No 47 1.07 Yes 0 0 No -22 0.52 No 48 55.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 151420635 + NM_015440 MTHFD1L 1 0.33 0.33 18 -5.11 73.52 57 9 Yes 44 1.6 Yes 0 0 No -56 0.84 Yes 14 84.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74432858 + NR_027405 MTHFD2 1 0.94 0.39 19 3.51 77.67 23 5.29 No 34 1.42 Yes 0 0 No -21 0.64 No 49 56.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 74429101 + NR_027405 MTHFD2 1 0.39 0.14 8 8.82 83.21 36 9.4 Yes 52 2.08 Yes 0 0 No -35 0.82 Yes 35 80.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74429658 + NR_027405 MTHFD2 1 0.49 0.19 13 3.11 84.41 17 6.54 Yes 4 0.52 No 0 0 No -22 0.42 No 34 52.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 74432858 + NR_027405 MTHFD2 1 0.27 0.13 7 3.51 77.67 23 5.29 No 34 1.42 Yes 0 0 No -21 0.64 No 49 56.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 74433108 + NR_027405 MTHFD2 1 0.18 1.33 51 8.73 89.72 27 6.51 Yes 14 0.85 Yes 26 0.89 Yes -26 0.87 Yes 44 88.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 74434940 + NR_027405 MTHFD2 1 0.01 0.11 8 4.58 82.1 24 3.95 No 11 0.39 No 0 0 No -23 0.7 Yes 47 62.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 74435773 + NR_027405 MTHFD2 1 0.03 0.21 11 7.35 73.81 25 6.32 Yes 68 -2.12 No 0 0 No -24 0.91 Yes 46 94.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74437056 + NR_027405 MTHFD2 1 0.02 0.11 7 -4.59 0 46 7.86 Yes 33 1.7 Yes 24 0.78 Yes -12 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 74439096 + NR_027405 MTHFD2 1 1.22 10.54 71 4.74 84.41 28 6.14 Yes 15 0.54 No 0 0 No -27 0.95 Yes 43 97.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74440428 + NR_027405 MTHFD2 1 0.17 1.49 53 4.62 0 52 6.94 Yes 39 1.96 Yes 0 0 No -51 0.73 Yes 19 87.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74441181 + NR_027405 MTHFD2 1 0.08 0.75 37 0.39 63.51 36 6.4 Yes 67 0.42 No 30 0.75 Yes -29 0.45 No 60 19.77 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 75046403 + NM_001004346 MTHFD2L 1 14.65 2.25 60 3.66 89.01 19 5 No 6 1.02 Yes 26 0.74 Yes -18 0.62 No 52 77.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 75046406 + NM_001004346 MTHFD2L 1 1.54 0.21 14 0.22 73.89 22 5.29 No 9 1.03 Yes 0 0 No -21 0.72 Yes 49 79.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 75046424 + NM_001004346 MTHFD2L 1 3.69 0.53 26 5.55 81.37 24 5.17 No 27 1.02 Yes 0 0 No -23 0.75 Yes 47 78.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 75061455 + NM_001004346 MTHFD2L 1 12.03 1.54 50 8.04 84.35 25 5.3 No 74 -4.4 No 0 0 No -22 0.78 Yes 48 87.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 75068180 + NM_001004346 MTHFD2L 1 0.95 0.13 7 5.82 89.02 17 6.28 Yes 67 1.06 Yes 0 0 No -22 0.49 No 44 46.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 75072638 + NM_001004346 MTHFD2L 1 3.71 0.47 21 -1.7 83.86 39 5.23 No 62 0.65 No 0 0 No -22 0.46 No 48 49.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 75072642 + NM_001004346 MTHFD2L 1 1.35 0.15 9 1.05 0 43 5.41 No 66 0.65 No 0 0 No -26 0.48 No 44 62.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 11850774 - NM_005957 MTHFR 1 7.39 1.35 49 3.36 0 20 4.47 No 49 1.2 Yes 0 0 No -20 0.47 No 50 34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 11850806 - NM_005957 MTHFR 1 10.44 1.79 55 5.22 83.98 30 9 Yes 17 1.23 Yes 0 0 No -25 0.73 Yes 41 45.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 11854535 - NM_005957 MTHFR 1 1.63 0.26 15 5.46 80.01 28 5.74 Yes 72 1.81 Yes 0 0 No -27 0.71 Yes 43 55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 11861474 - NM_005957 MTHFR 1 1.48 0.4 25 6.01 80.37 34 6.63 Yes 59 1.44 Yes 19 0.4 Yes -33 0.78 Yes 37 86.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 80139199 - NR_037654 MTHFS 1 1.79 1.65 50 10.32 80.32 29 5.57 Yes 56 0.03 No 0 0 No -28 0.91 Yes 42 96.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 80142736 - NR_037654 MTHFS 1 0.48 0.4 21 9.92 85.67 28 5.91 Yes 15 1.06 Yes 0 0 No -27 0.56 No 43 64.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 80147736 - NR_037654 MTHFS 1 0.14 0.14 8 14.06 89.91 25 5.09 No 12 1.94 Yes 0 0 No -24 0.82 Yes 46 91.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 86569087 - NM_001159380 MTHFSD 1 1.01 0.38 23 3.71 83.83 32 5.35 No 9 0.71 No 0 0 No -21 0.69 Yes 49 70.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 86569122 - NM_001159380 MTHFSD 1 2.1 0.75 37 6.57 76.91 31 5.8 Yes 18 0.5 No 0 0 No -30 0.77 Yes 40 74.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 86569751 - NM_001159380 MTHFSD 1 0.59 0.17 10 6.28 82.54 22 6.4 Yes 9 1.73 Yes 0 0 No -21 0.68 Yes 49 69.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 86574805 - NM_001159380 MTHFSD 1 1.51 0.53 26 9.42 94.05 26 6.92 Yes 62 -2.65 No 25 0.75 Yes -21 0.64 No 40 70.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 86581175 - NM_001159380 MTHFSD 1 1.36 0.49 24 10.08 88.43 27 4.73 No 17 0.19 No 21 0.8 Yes -21 0.42 No 41 41.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 86581718 - NM_001159380 MTHFSD 1 21.95 7.94 72 7 79.77 21 6.16 Yes 71 0.85 Yes 20 0.78 Yes -20 0.94 Yes 50 80.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 86585899 - NM_001159380 MTHFSD 1 132.48 21.31 72 3.27 72.89 24 5.83 Yes 33 0.33 No 24 0.89 Yes -24 0.63 No 47 66.54 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 55464529 - NM_001321001 MTIF2 1 0.11 0.17 11 5.46 86.35 26 4.37 No 44 1.4 Yes 0 0 No -20 0.76 Yes 50 82.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55467282 - NM_001321001 MTIF2 1 1.12 1.47 48 2.55 76.8 26 6.24 Yes 38 0.76 No 0 0 No -54 0.44 No 47 44.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 55479466 - NM_001321001 MTIF2 1 0.23 0.4 22 9.09 91.24 17 4.61 No 66 0.51 No 0 0 No -23 0.91 Yes 47 91.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55479676 - NM_001321001 MTIF2 1 0.62 0.53 27 5.05 72.55 22 6.05 Yes 76 0.67 No 0 0 No -21 0.84 Yes 49 88.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55479745 - NM_001321001 MTIF2 1 0.27 0.22 13 6.51 89.95 20 5.57 Yes 59 1.06 Yes 0 0 No -19 0.42 No 51 69.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 55480924 - NM_001321001 MTIF2 1 0.17 0.15 10 3.67 84 15 4.86 No 48 2.08 Yes 0 0 No -60 0.47 No 17 66.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 55480924 - NM_001321001 MTIF2 1 0.27 0.18 11 3.67 84 15 4.86 No 48 2.08 Yes 0 0 No -60 0.47 No 17 66.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 55489560 - NM_001321001 MTIF2 1 0.35 0.61 33 -5.93 0 55 5.32 No 5 1.06 Yes 0 0 No -50 0.63 No 20 91.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 55491847 - NM_001321001 MTIF2 1 0.85 1.25 51 5.91 85.98 17 4.69 No 4 0.22 No 0 0 No -19 0.46 No 53 63.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 55491860 - NM_001321001 MTIF2 1 0.15 0.21 13 4.48 74.41 31 6.92 Yes 71 0.2 No 0 0 No -34 0.75 Yes 36 75.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55493655 - NM_001321001 MTIF2 1 7.97 10.78 72 3.01 0 30 5.51 No 17 0.09 No 29 0.48 Yes -29 0.83 Yes 37 61.81 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 55493655 - NM_001321001 MTIF2 1 0.1 0.15 8 3.01 0 30 5.51 No 17 0.09 No 29 0.48 Yes -29 0.83 Yes 37 61.81 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 55493659 - NM_001321001 MTIF2 1 0.51 0.75 36 -0.28 84.41 26 5.28 No 13 0.1 No 29 0.48 Yes -25 0.8 Yes 41 61.86 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr13 28014307 - NM_152912 MTIF3 1 0.23 0.17 11 -0.82 71.25 22 4.18 No 5 0.69 No 0 0 No -29 0.84 Yes 41 77.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 28015215 - NM_152912 MTIF3 1 2.87 2.24 61 7.05 81.98 39 4.68 No 26 0.91 Yes 28 0.6 Yes -27 0.72 Yes 43 77.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 28019275 - NM_152912 MTIF3 1 3.68 1.44 48 8.19 91.5 25 4.52 No 38 1.38 Yes 24 0.82 Yes -24 0.7 Yes 46 57.12 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 28024056 - NM_152912 MTIF3 1 0.48 0.18 13 6.54 76.2 32 6.48 Yes 19 1.1 Yes 31 0.89 Yes -31 0.92 Yes 39 93.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 149769926 + NM_000252 MTM1 1 4 0.5 26 0.13 64.71 32 8.2 Yes 19 0.12 No 0 0 No -31 0.74 Yes 39 62.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 149839903 + NM_000252 MTM1 1 6.62 1.39 54 6.7 84.4 28 5.12 No 15 1.2 Yes 24 0.86 Yes -27 0.64 No 43 82.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 149877239 + NM_001306144 MTMR1 1 1.93 1.01 41 5.39 89.29 25 5.11 No 12 0.21 No 0 0 No -24 0.89 Yes 46 85.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 149894881 + NM_001306144 MTMR1 1 3.43 3.76 69 10.73 87.18 33 6.71 Yes 20 0.38 No 0 0 No -32 0.7 Yes 38 78.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 149903935 + NM_001306144 MTMR1 1 4.33 4.26 70 6.37 76.79 38 7.31 Yes 2 1.1 Yes 37 0.56 Yes -37 0.89 Yes 33 94.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 149918832 + NM_001306144 MTMR1 1 0.13 0.14 8 10.32 91.45 21 6.24 Yes 66 1.32 Yes 0 0 No -20 0.87 Yes 50 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 149919263 + NM_001306144 MTMR1 1 0.24 0.25 15 4.95 72.99 41 5.93 Yes 75 1.52 Yes 0 0 No -26 0.54 No 44 60.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 149919501 + NM_001306144 MTMR1 1 10.37 8.21 72 9.03 85.38 23 4.9 No 10 1.65 Yes 22 0.98 Yes -22 0.96 Yes 48 96.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 149921297 + NM_001306144 MTMR1 1 0.5 0.42 25 7.83 84.32 36 6.64 Yes 15 0.28 No 0 0 No -30 0.58 No 40 81.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 149932984 + NM_001306144 MTMR1 1 0.35 0.22 12 9.08 90.75 41 8.2 Yes 28 1.21 Yes 28 0.89 Yes -28 0.83 Yes 42 82.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 31233457 - NM_017762 MTMR10 1 0.83 0.24 15 10.79 94.99 34 6.71 Yes 44 0.77 Yes 33 0.5 Yes -33 0.48 No 37 68.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 31234313 - NM_017762 MTMR10 1 4.16 1.36 48 7.82 77.86 42 6.69 Yes 56 0.85 Yes 26 0.54 Yes -41 0.75 Yes 34 61.5 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 31236762 - NM_017762 MTMR10 1 0.98 0.22 12 3.01 0 34 5.76 Yes 17 1.02 Yes 0 0 No -29 0.43 No 37 65.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 31238983 - NM_017762 MTMR10 1 2.51 0.53 30 8.19 86.43 21 5.92 Yes 69 0.57 No 20 0.77 Yes -20 0.54 No 52 81.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 31239209 - NM_017762 MTMR10 1 0.35 0.1 7 7.61 79.93 28 4.85 No 2 1 Yes 0 0 No -30 0.83 Yes 40 82.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 31258244 - NM_017762 MTMR10 1 18.51 4.31 68 7.74 81.82 33 6.61 Yes 20 0.58 No 22 0.65 Yes -32 0.44 No 38 68.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 31260226 - NM_017762 MTMR10 1 0.47 0.17 10 3.42 68.75 34 5.04 No 26 -2.89 No 19 0.83 Yes -29 0.42 No 41 46.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 31267193 - NM_017762 MTMR10 1 0.39 0.14 9 3.36 79.89 22 4.8 No 16 0.09 No 0 0 No -39 0.64 No 31 65.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 31279117 - NM_017762 MTMR10 1 0.75 0.22 12 5.78 78.82 24 5 No 11 0.76 No 0 0 No -23 0.64 No 47 70.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 32233115 - NM_001040446 MTMR12 1 1.4 0.85 40 7.33 0 15 4.58 No 11 1.68 Yes 0 0 No -23 0.25 No 47 54.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 32233127 - NM_001040446 MTMR12 1 7.78 4.64 69 3.7 70.84 32 4.97 No -1 1.57 Yes 27 0.89 Yes -27 0.6 No 43 78.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 32234036 - NM_001040446 MTMR12 1 1.75 0.81 37 -1.85 0 26 6.16 Yes 13 1.31 Yes 0 0 No -28 0.53 No 42 72.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 32239275 - NM_001040446 MTMR12 1 0.83 0.5 30 -10.87 0 56 8.92 Yes 43 1.17 Yes 0 0 No -55 0.85 Yes 15 87.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 32239278 - NM_001040446 MTMR12 1 0.47 0.28 14 -1.85 76.95 53 8.76 Yes 40 1.17 Yes 0 0 No -52 0.83 Yes 18 87.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 32243456 - NM_001040446 MTMR12 1 0.2 0.11 8 5.33 73.05 35 6.43 Yes 65 0.21 No 0 0 No -34 0.45 No 38 65.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 32247925 - NM_001040446 MTMR12 1 0.51 0.31 19 11.39 91.22 30 7.34 Yes 17 0.82 Yes 0 0 No -24 0.46 No 44 75.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 32259652 - NM_001040446 MTMR12 1 2.68 1.79 55 7.56 83.18 36 5.87 Yes 71 -3.58 No 0 0 No -35 0.72 Yes 35 53.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 32259700 - NM_001040446 MTMR12 1 0.33 0.21 11 5.81 79.99 24 4.99 No 65 0.32 No 0 0 No -23 0.87 Yes 47 90.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 32271062 - NM_001040446 MTMR12 1 0.14 0.11 7 1.79 0 31 6.58 Yes 18 1.13 Yes 20 0.67 Yes -30 0.48 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 32276030 - NM_001040446 MTMR12 1 0.32 0.13 8 8.1 92.03 28 6.35 Yes 55 0.07 No 0 0 No -27 0.83 Yes 43 87.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 32280893 - NM_001040446 MTMR12 1 3.45 1 38 6.91 82 24 5.1 No 65 0.5 No 0 0 No -23 0.63 No 47 83.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 32311983 - NM_001040446 MTMR12 1 0.53 0.11 7 6.89 77.18 14 5.13 No 73 -4.08 No 0 0 No -28 0.43 No 42 30.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9692011 + NM_022485 MTMR14 1 0.44 0.36 21 4.54 76.47 49 7.14 Yes 36 0.92 Yes 44 0.14 Yes -48 0.84 Yes 22 85.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 9701148 + NM_022485 MTMR14 1 0.23 0.28 14 7.93 85.05 30 6.63 Yes 17 1.15 Yes 0 0 No -29 0.83 Yes 41 80.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9712734 + NM_022485 MTMR14 1 0.1 0.17 11 -0.54 77.04 31 7.13 Yes 18 1.37 Yes 0 0 No -30 0.84 Yes 40 71.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9712734 + NM_022485 MTMR14 1 2.72 4.32 71 -0.54 77.04 31 7.13 Yes 18 1.37 Yes 0 0 No -30 0.84 Yes 40 71.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9717225 + NM_022485 MTMR14 1 0.13 0.19 12 7.04 88.06 29 5.66 Yes 65 0.32 No 0 0 No -28 0.75 Yes 42 60.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 9726120 + NM_022485 MTMR14 1 0.1 0.17 9 6.81 76.05 19 6.32 Yes 6 1.92 Yes 0 0 No -18 0.59 No 48 60.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 9726265 + NM_022485 MTMR14 1 0.06 0.11 8 -7.27 64.86 52 8.89 Yes 39 1.22 Yes 25 0.54 Yes -51 0.79 Yes 19 97.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 9726487 + NM_022485 MTMR14 1 0.29 0.35 17 6.22 76.99 27 6.59 Yes 14 1.45 Yes 0 0 No -26 0.77 Yes 44 69.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9729855 + NM_022485 MTMR14 1 0.13 0.21 10 -5.19 0 14 3.3 No 55 -4.38 No 0 0 No -16 0.58 No 54 45.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9731647 + NM_022485 MTMR14 1 593.81 85.38 72 10.03 92 25 5.39 No 12 1.13 Yes 24 0.98 Yes -24 0.96 Yes 46 97.28 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 9739394 + NM_022485 MTMR14 1 13.8 2.03 64 11.13 83.5 38 7.51 Yes 25 2.26 Yes 37 0.81 Yes -37 0.69 Yes 33 91.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 95599651 - NM_001243571 MTMR2 1 1.17 0.18 11 5.04 84.45 16 4.5 No 3 0.45 No 26 0.51 Yes -26 0.84 Yes 44 55.06 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 95599651 - NM_001243571 MTMR2 1 7.41 1.13 49 5.04 84.45 16 4.5 No 3 0.45 No 26 0.51 Yes -26 0.84 Yes 44 55.06 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 95599651 - NM_001243571 MTMR2 1 7.15 1 38 5.04 84.45 16 4.5 No 3 0.45 No 26 0.51 Yes -26 0.84 Yes 44 55.06 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 95641088 - NM_001243571 MTMR2 1 0.6 0.4 22 7.91 86.22 36 5.53 No 69 1.3 Yes 0 0 No -35 0.59 No 35 86.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 30296157 + NM_153051 MTMR3 1 1.23 0.32 20 7.62 82.38 20 5.71 Yes 66 -3.13 No 0 0 No -22 0.78 Yes 48 86.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 30302030 + NM_153051 MTMR3 1 1.17 0.31 19 6.62 88.31 32 6.16 Yes 19 0.42 No 0 0 No -31 0.78 Yes 39 92.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 30348506 + NM_153051 MTMR3 1 0.47 0.14 8 3.37 70.02 56 7.68 Yes 43 1.28 Yes 0 0 No -39 0.83 Yes 31 86.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 30367300 + NM_153051 MTMR3 1 0.28 0.11 7 9.78 89.22 28 5.48 No 29 1.29 Yes 0 0 No -27 0.57 No 49 62.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 30374413 + NM_153051 MTMR3 1 0.34 0.14 9 5.81 70.75 27 5.14 No 1 0.06 No 26 0.48 Yes -21 0.44 No 49 47.26 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 30382511 + NM_153051 MTMR3 1 0.98 0.49 22 11.72 85.31 38 6.16 Yes 75 1.6 Yes 0 0 No -31 0.54 No 39 72.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 30390038 + NM_153051 MTMR3 1 0.85 0.28 16 7.74 90.23 18 4.8 No 5 1.16 Yes 0 0 No -31 0.67 Yes 53 58.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 30418017 + NM_153051 MTMR3 1 519.01 23.46 72 8.95 86.49 23 5.39 No 71 0.8 Yes 22 0.86 Yes -22 0.93 Yes 48 91.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 30419445 + NM_153051 MTMR3 1 6.13 1.75 52 12.76 90.56 24 5.48 No 11 1.4 Yes 23 0.92 Yes -23 0.88 Yes 47 91.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 56569365 - NM_004687 MTMR4 1 0.05 0.17 7 4.16 84.45 21 4.54 No 4 0.4 No 0 0 No -24 0.69 Yes 46 76.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56581279 - NM_004687 MTMR4 1 0.06 0.17 11 -9.09 0 13 3.87 No 57 -4.92 No 24 0.63 Yes -12 0.79 Yes 58 47.8 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 56581865 - NM_004687 MTMR4 1 0.08 0.11 7 4.28 76.85 24 4.59 No 68 0.32 No 20 0.87 Yes -23 0.55 No 47 44.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 56584960 - NM_004687 MTMR4 1 0.4 0.72 34 0.15 0 42 6.06 Yes 23 0.71 No 0 0 No -41 0.51 No 29 70.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56584964 - NM_004687 MTMR4 1 0.1 0.15 11 4.11 82.27 38 5.76 Yes 19 0.71 No 0 0 No -37 0.59 No 33 73.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56586178 - NM_004687 MTMR4 1 0.18 0.36 18 3.5 76.52 21 5.83 Yes 42 0.88 Yes 0 0 No -20 0.46 No 50 48.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56586181 - NM_004687 MTMR4 1 0.07 0.14 8 4.56 75.13 18 5.57 Yes 39 0.88 Yes 0 0 No -51 0.45 No 46 44.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56586226 - NM_004687 MTMR4 1 0.14 0.29 15 6.5 82.63 38 6.44 Yes 57 1.05 Yes 29 0.93 Yes -24 0.41 No 46 55.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 56586307 - NM_004687 MTMR4 1 0.45 0.88 40 9.59 88.74 17 7.8 Yes 4 0.32 No 0 0 No -24 0.67 Yes 46 81.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56588891 - NM_004687 MTMR4 1 0.05 0.14 10 -6.96 0 9 3.87 No -4 0.48 No 26 0.91 Yes -8 0.47 No 56 33.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 56592445 - NM_004687 MTMR4 1 16.25 2.92 64 8.09 95.48 23 4.05 No 2 0.65 No 22 0.61 Yes -22 0.56 No 48 39.88 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 25827976 - NM_004685 MTMR6 1 0.61 0.49 25 6.65 91.25 18 4.75 No 5 0.64 No 0 0 No -21 0.95 Yes 49 95.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25827976 - NM_004685 MTMR6 1 0.59 0.44 24 6.65 91.25 18 4.75 No 5 0.64 No 0 0 No -21 0.95 Yes 49 95.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25838889 - NM_004685 MTMR6 1 0.14 0.1 7 4.74 84.41 33 6.93 Yes 20 1.42 Yes 0 0 No -32 0.88 Yes 38 79.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 25840371 - NM_004685 MTMR6 1 0.34 0.35 23 1.14 61.64 46 7.14 Yes 67 0.09 No 0 0 No -24 0.51 No 46 50.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 11155408 + NM_015458 MTMR9 1 6.32 3.54 60 7.16 87.84 39 6.21 Yes 18 0.94 Yes 30 0.65 Yes -38 0.74 Yes 32 64.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 11156343 + NM_015458 MTMR9 1 0.28 0.13 9 9.21 85.73 41 6.56 Yes 61 0.87 Yes 0 0 No -40 0.66 No 30 87.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 11162422 + NM_015458 MTMR9 1 0.45 0.25 14 4.19 71.85 43 6.83 Yes 43 0.29 No 0 0 No -43 0.53 No 24 51.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 11163681 + NM_015458 MTMR9 1 0.41 0.19 13 6.28 82.1 26 5.33 No 39 1.11 Yes 26 0.44 Yes -26 0.66 Yes 44 69.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 11172373 + NM_015458 MTMR9 1 0.45 0.22 14 4.66 85.76 36 5.8 Yes 6 0.83 Yes 0 0 No -22 0.84 Yes 48 88.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 11172463 + NM_015458 MTMR9 1 0.8 0.42 23 0.25 68.14 21 5.35 No 69 1.37 Yes 0 0 No -23 0.28 No 50 33.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 11177178 + NM_015458 MTMR9 1 0.43 0.18 9 2.74 77.97 34 6.91 Yes 4 0.24 No 24 0.85 Yes -33 0.71 Yes 37 42.78 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 74175936 + NM_133645 MTO1 1 0.31 0.19 13 1.02 0 40 7.34 Yes 27 1.19 Yes 0 0 No -39 0.84 Yes 31 76.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 74176215 + NM_133645 MTO1 1 0.16 0.14 7 -4.81 0 40 5.59 Yes 35 0.65 No 0 0 No -26 0.59 No 44 59.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 74181182 + NM_133645 MTO1 1 4.26 2.89 65 9.9 82.75 27 5.29 No 37 0.58 No 26 0.77 Yes -26 0.62 No 44 63.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 74189684 + NM_133645 MTO1 1 0.12 0.15 9 2.37 60.67 34 5.82 Yes 65 1.48 Yes 25 0.33 Yes -57 0.65 No 13 67.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 74189761 + NM_133645 MTO1 1 1.18 1.47 56 9.92 91.79 18 4.86 No 5 2.14 Yes 28 0.52 Yes -17 0.57 No 53 71.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 74190719 + NM_133645 MTO1 1 1.78 1.63 55 2.3 84.41 34 6.16 Yes 71 0.65 No 33 0.66 Yes -31 0.54 No 39 74.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 74190723 + NM_133645 MTO1 1 2.52 2.38 64 3.01 0 38 6.48 Yes 75 0.65 No 33 0.66 Yes -35 0.53 No 35 75.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 74191751 + NM_133645 MTO1 1 10.45 9.76 72 6.37 78.78 22 5.43 No 37 0.55 No 24 0.86 Yes -24 0.59 No 46 77.26 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 74196173 + NM_133645 MTO1 1 0.18 0.13 7 -4.42 0 16 4.36 No 33 2.08 Yes 0 0 No -45 0.7 Yes 25 84.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 74196320 + NM_133645 MTO1 1 1.72 1.44 56 4.09 80.67 22 7.91 Yes 26 0.65 No 21 0.61 Yes -21 0.54 No 45 46.88 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 74200798 + NM_133645 MTO1 1 0.2 0.17 10 8.2 83.61 31 5.56 Yes 18 0.51 No 0 0 No -24 0.76 Yes 46 89.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 11171811 - NM_004958 MTOR 1 0.55 0.56 25 1.93 65.1 18 4.11 No -4 0.08 No 22 0.54 Yes -17 0.37 No 53 35.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 11181442 - NM_004958 MTOR 1 0.44 0.49 28 7.31 79.14 23 5.39 No -3 0.18 No 21 0.93 Yes -22 0.82 Yes 48 83.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 11184655 - NM_004958 MTOR 1 0.52 0.56 29 7.37 83.37 22 5.29 No 47 2.06 Yes 0 0 No -26 0.56 No 44 61.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 11184687 - NM_004958 MTOR 1 0.12 0.15 9 1.5 0 28 5.85 Yes 15 2.07 Yes 0 0 No -27 0.93 Yes 43 90.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11188208 - NM_004958 MTOR 1 0.27 0.28 16 8.89 83.96 37 5.61 Yes 55 1.95 Yes 28 0.82 Yes -36 0.77 Yes 34 72.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 11189945 - NM_004958 MTOR 1 0.19 0.17 9 8.58 85.27 16 5.58 Yes 39 1.1 Yes 0 0 No -23 0.64 No 40 66.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 11272527 - NM_004958 MTOR 1 0.16 0.18 11 -2.54 0 20 4.9 No 61 0.96 Yes 0 0 No -24 0.83 Yes 46 92.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11272544 - NM_004958 MTOR 1 1.55 1.92 57 -0.2 69.19 13 4.79 No 44 0.96 Yes 24 0.64 Yes -19 0.7 Yes 51 73.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 11276277 - NM_004958 MTOR 1 0.79 0.68 34 5.06 89.7 18 4.78 No 21 1.83 Yes 0 0 No -22 0.77 Yes 37 77.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11276280 - NM_004958 MTOR 1 0.43 0.4 18 5.26 0 15 4.47 No 18 1.83 Yes 0 0 No -30 0.64 No 40 87.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 11305960 - NM_004958 MTOR 1 0.2 0.22 14 1.28 0 30 6.63 Yes 35 0.12 No 0 0 No -27 0.64 No 43 72.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 11308560 - NM_004958 MTOR 1 0.11 0.15 10 7.27 75.55 22 5.24 No 76 0.77 Yes 0 0 No -24 0.85 Yes 46 89.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11316384 - NM_004958 MTOR 1 0.14 0.15 9 12.71 85.72 32 5.66 Yes 19 0.6 No 0 0 No -31 0.65 No 39 75.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 11319508 - NM_004958 MTOR 1 6.88 3.78 69 7.06 90.04 28 5.51 No 62 0.31 No 20 0.56 Yes -22 0.45 No 48 51.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 30602856 - NM_018109 MTPAP 1 0.66 0.69 33 8.28 83.32 24 6.71 Yes 11 1.2 Yes 0 0 No -23 0.58 No 47 59.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 30605134 - NM_018109 MTPAP 1 0.14 0.14 9 -0.41 0 9 2.87 No 56 0.19 No 0 0 No -35 0.52 No 35 56.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 30625842 - NM_018109 MTPAP 1 0.12 0.1 7 6.47 82.92 28 5.2 No 31 1.59 Yes 0 0 No -31 0.51 No 39 55.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 30625866 - NM_018109 MTPAP 1 0.79 0.68 34 5.14 81.36 34 4.61 No 7 1.59 Yes 0 0 No -19 0.66 No 37 75.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 30625927 - NM_018109 MTPAP 1 0.91 0.82 40 2.67 78.77 16 5.19 No 76 1.44 Yes 0 0 No -20 0.7 Yes 50 58.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 30625961 - NM_018109 MTPAP 1 2.11 1.96 58 3.54 77.46 55 8.53 Yes 42 1.47 Yes 29 0.35 Yes -25 0.38 No 28 60.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 30626326 - NM_018109 MTPAP 1 0.14 0.13 8 6.36 93.18 28 5.29 No 43 0.64 No 0 0 No -27 0.79 Yes 43 77.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 236966730 + NM_000254 MTR 1 11.55 4.82 72 3.17 78.79 30 4.74 No 45 1.81 Yes 0 0 No -57 0.53 No 41 58.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 236974944 + NM_000254 MTR 1 1.32 1.01 45 7.71 81.61 19 5.73 Yes 6 1.44 Yes 29 0.89 Yes -29 0.92 Yes 41 93.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 236995271 + NM_000254 MTR 1 0.51 0.47 27 1.11 0 9 3.46 No 70 0.23 No 0 0 No -26 0.76 Yes 44 64.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 41791381 - NM_004294 MTRF1 1 0.82 0.22 16 0.86 0 21 4.51 No 29 1.12 Yes 23 0.9 Yes -20 0.66 Yes 50 59.27 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 41794452 - NM_004294 MTRF1 1 0.4 0.11 7 5.25 0 51 7.83 Yes 38 0.74 No 0 0 No -45 0.5 No 20 48.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 41794780 - NM_004294 MTRF1 1 0.78 0.19 12 5.12 84.32 32 5.71 Yes 22 1.17 Yes 26 0.42 Yes -29 0.73 Yes 41 75.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 41801258 - NM_004294 MTRF1 1 2.99 0.94 42 7.39 87.44 18 7 Yes 5 1.21 Yes 0 0 No -17 0.45 No 53 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 41801382 - NM_004294 MTRF1 1 5.01 1.6 54 7.19 84.41 24 5.1 No 11 0.89 Yes 0 0 No -23 0.88 Yes 47 85.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 41804726 - NM_004294 MTRF1 1 3.46 1.14 50 9.76 89.58 46 7.52 Yes 3 0.62 No 0 0 No -40 0.85 Yes 30 86.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41807855 - NM_004294 MTRF1 1 2.02 0.57 31 5.33 74.4 24 6.92 Yes 11 0.64 No 0 0 No -23 0.82 Yes 47 92.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41831933 - NM_004294 MTRF1 1 6.2 3.26 68 9.39 83.92 35 6.41 Yes 44 0.61 No 33 0.41 Yes -37 0.44 No 33 63.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 41835012 - NM_004294 MTRF1 1 0.78 0.14 8 8.84 80.59 35 3.7 No 10 0.93 Yes 0 0 No -22 0.87 Yes 48 66.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 41835962 - NM_004294 MTRF1 1 2.34 0.4 17 11.85 90.57 25 7.26 Yes 38 0.72 No 24 0.86 Yes -24 0.89 Yes 46 84.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 41836468 - NM_004294 MTRF1 1 60.14 7.99 72 3.42 0 44 8 Yes 31 1.01 Yes 43 0.44 Yes -43 0.9 Yes 27 96.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 41836472 - NM_004294 MTRF1 1 7.31 0.94 39 2.3 84.41 40 7.75 Yes 27 1.02 Yes 43 0.44 Yes -39 0.88 Yes 31 95.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 41836618 - NM_004294 MTRF1 1 30.75 4.5 69 6.57 85.72 39 5.47 No 26 1.39 Yes 31 0.65 Yes -38 0.42 No 32 38.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 153312457 - NR_126056 MTRF1L 1 191.76 49.51 72 5.18 76.92 49 6.99 Yes 18 0.54 No 30 0.44 Yes -30 0.56 No 40 58.56 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 153312552 - NR_126056 MTRF1L 1 9.66 2.44 68 7.36 79.04 33 5.76 Yes 43 0.14 No 32 0.55 Yes -32 0.73 Yes 38 77.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 153316455 - NR_126056 MTRF1L 1 172.86 49.85 72 8.35 94.82 19 5.46 No 62 1.27 Yes 25 0.36 Yes -28 0.49 No 42 45.05 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 153319286 - NR_126056 MTRF1L 1 1.67 0.51 27 2.61 83.21 48 7.07 Yes 59 0.63 No 0 0 No -30 0.7 Yes 33 78.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 153319289 - NR_126056 MTRF1L 1 2.15 0.58 30 7.89 85.05 45 6.86 Yes 56 0.63 No 0 0 No -27 0.71 Yes 36 78.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 7870016 + NM_002454 MTRR 1 0.75 0.21 12 8.17 82.18 24 4.53 No 67 0.44 No 0 0 No -23 0.79 Yes 47 74.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 7878061 + NM_002454 MTRR 1 2.64 2.76 64 4.33 0 45 7.14 Yes 32 0.13 No 39 0.52 Yes -44 0.91 Yes 26 95.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 7883836 + NM_002454 MTRR 1 0.24 0.32 16 10.41 95 55 9.25 Yes 42 2.97 Yes 0 0 No -24 0.77 Yes 46 52.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 7885801 + NM_002454 MTRR 1 0.11 0.17 9 1.7 0 34 6.65 Yes 12 0.99 Yes 36 0.6 Yes -25 0.51 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 7890373 + NM_002454 MTRR 1 3.01 4.36 69 9.58 78.32 22 6 Yes 9 1.45 Yes 21 0.81 Yes -21 0.83 Yes 49 89.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 7890389 + NM_002454 MTRR 1 0.12 0.17 11 8.67 88.94 19 5 No 25 1.43 Yes 0 0 No -37 0.67 Yes 33 69.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 7892913 + NM_002454 MTRR 1 0.13 0.18 10 2.97 75.39 35 6.98 Yes 59 0.36 No 0 0 No -34 0.85 Yes 36 82.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 7893619 + NM_002454 MTRR 1 0.16 0.24 15 10.3 86.3 26 5.33 No 1 0.35 No 25 0.86 Yes -25 0.52 No 45 52.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 7897152 + NM_002454 MTRR 1 0.28 0.33 17 1.04 67.08 13 5 No 22 0.9 Yes 23 0.78 Yes -48 0.41 No 22 41.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 7898054 + NM_002454 MTRR 1 1.14 0.97 35 4.58 64.32 35 5.97 Yes 22 1.02 Yes 0 0 No -34 0.85 Yes 36 91.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155181869 + NM_198883 MTX1 1 10.93 0.65 33 4.14 69.13 29 5.57 Yes 38 -1 No 0 0 No -28 0.62 No 44 49.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155181880 + NM_198883 MTX1 1 1.9 0.11 7 3.13 0 15 4.47 No 2 0.4 No 24 0.63 Yes -39 0.49 No 56 35.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 155181917 + NM_198883 MTX1 1 1427.12 93.29 72 7.62 89.51 25 5.75 Yes 39 0.39 No 24 0.63 Yes -24 0.54 No 46 72.83 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 155181920 + NM_198883 MTX1 1 7.27 0.31 15 -4.49 70.35 28 5.97 Yes 42 0.39 No 0 0 No -27 0.52 No 43 62.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 177134943 + NM_001319097 MTX2 1 5.47 7 71 -2.38 81.93 28 5.29 No 49 0.6 No 27 0.84 Yes -27 0.74 Yes 43 75.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 177166008 + NM_001319097 MTX2 1 0.38 0.69 35 7.66 78.3 19 4.57 No 27 0.71 No 0 0 No -21 0.61 No 49 83.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 177168968 + NM_001319097 MTX2 1 0.68 1.21 47 7.32 81.21 44 5.13 No 74 0.43 No 27 0.67 Yes -27 0.65 No 39 67.85 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 177173114 + NM_001319097 MTX2 1 0.07 0.11 8 8.85 88.97 43 6.56 Yes 69 1.4 Yes 0 0 No -31 0.85 Yes 39 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 177187115 + NM_001319097 MTX2 1 0.11 0.18 12 7.3 86.31 34 5.06 No 13 0.79 Yes 0 0 No -25 0.54 No 45 60.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 177193613 + NM_001319097 MTX2 1 0.07 0.1 7 1.94 0 15 4.58 No 19 1.52 Yes 0 0 No -31 0.67 Yes 39 86.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 79281483 - NM_001010891 MTX3 1 45.05 15.22 72 8.66 81.89 43 5.04 No 9 1.33 Yes 21 0.69 Yes -43 0.41 No 27 67.24 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 20827897 - NM_024544 MUL1 1 0.14 0.13 8 -1.22 68.75 12 5 No 70 0.73 No 0 0 No -41 0.5 No 35 73.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 20827930 - NM_024544 MUL1 1 0.28 0.25 13 6.75 76.09 50 7.07 Yes 37 0.75 No 25 0.66 Yes -36 0.65 No 27 52.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 20833340 - NM_024544 MUL1 1 0.28 0.11 7 4.38 84.41 68 8.48 Yes 49 2.09 Yes 0 0 No -61 0.29 No 41 20.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1358586 + NM_032853 MUM1 1 51.92 28.71 72 5.69 83.38 32 6.26 Yes 19 1.06 Yes 31 0.91 Yes -31 0.79 Yes 39 78.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1371232 + NM_032853 MUM1 1 0.94 0.33 20 6.74 79.09 13 5.83 Yes 0 0.02 No 27 0.4 Yes -27 0.56 No 43 69.08 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1373484 + NM_032853 MUM1 1 0.67 0.25 16 12.2 83.42 39 7.28 Yes 26 2.1 Yes 25 0.74 Yes -38 0.88 Yes 32 92.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1373946 + NM_032853 MUM1 1 0.6 0.24 14 6.19 80.01 25 5.48 No NA NA NA 0 0 No -27 0.84 Yes 43 89.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1376143 + NM_032853 MUM1 1 5.18 2.1 61 11.15 88.27 29 7.35 Yes 16 0.86 Yes 0 0 No -28 0.9 Yes 42 95.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65629918 + NM_025128 MUS81 1 0.18 0.15 8 -0.24 0 28 5.83 Yes 15 0.7 No 0 0 No -27 0.75 Yes 43 78.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65631048 + NM_025128 MUS81 1 5.63 2.9 67 8.79 77.97 17 5.57 Yes 56 -2.94 No 24 0.52 Yes -20 0.37 No 64 23.96 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 65631271 + NM_025128 MUS81 1 5.44 4.07 70 -0.11 71.56 17 5.29 No 4 0.52 No 22 0.63 Yes -16 0.8 Yes 54 87.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65632214 + NM_025128 MUS81 1 0.3 0.42 23 3.8 79.69 18 5.62 Yes 5 1.04 Yes 21 0.77 Yes -21 0.8 Yes 49 85.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65632471 + NM_025128 MUS81 1 0.39 0.28 16 -1.08 0 20 4.23 No 63 0.5 No 18 0.76 Yes -19 0.5 No 51 48.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 65632585 + NM_025128 MUS81 1 5.81 5.38 69 7.5 82.53 39 7.37 Yes 3 1.73 Yes 30 0.68 Yes -30 0.33 No 40 47.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 65632633 + NM_025128 MUS81 1 0.19 0.21 11 4.75 76.27 20 4.94 No 51 1.69 Yes 25 0.44 Yes -20 0.46 No 50 31.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 65633236 + NM_025128 MUS81 1 0.13 0.17 11 2.82 73 36 8.37 Yes 23 2.45 Yes 0 0 No -35 0.58 No 35 86.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 49404311 - NM_000255 MUT 1 3.24 1.96 62 8.59 88.56 33 7.16 Yes 69 0.77 Yes 0 0 No -32 0.72 Yes 38 71.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 49425115 - NM_000255 MUT 1 0.1 0.13 7 4.62 73.76 30 6.91 Yes 17 0.68 No 0 0 No -29 0.94 Yes 41 96.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45795065 - NM_001293195 MUTYH 1 0.21 0.13 8 -5.42 0 14 3.74 No 37 -0.89 No 0 0 No -29 0.41 No 41 26.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45795741 - NM_001293195 MUTYH 1 0.96 0.51 19 4.75 85.02 17 6.93 Yes 4 1.07 Yes 21 0.6 Yes -29 0.54 No 43 50.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 45797545 - NM_001293195 MUTYH 1 0.33 0.13 8 3.38 74.32 22 5.2 No 9 1.14 Yes 21 0.8 Yes -21 0.79 Yes 49 37.65 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 45799168 - NM_001293195 MUTYH 1 0.45 0.15 8 -2.49 73.36 18 6.32 Yes 5 0.88 Yes 0 0 No -33 0.81 Yes 37 70.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45799170 - NM_001293195 MUTYH 1 17.89 5.5 71 6.36 80.74 16 6.16 Yes 3 0.88 Yes 31 0.61 Yes -31 0.85 Yes 39 77.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 45799237 - NM_001293195 MUTYH 1 30.27 9.03 72 1.47 73.38 26 4.83 No 13 -1.5 No 18 0.76 Yes -18 0.51 No 52 70.13 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 45799267 - NM_001293195 MUTYH 1 14.52 4.29 71 -0.83 0 18 4.24 No 5 0.57 No 19 0.11 Yes -17 0.85 Yes 53 69.18 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 45799276 - NM_001293195 MUTYH 1 2.31 0.64 29 -2.06 70.51 17 3.48 No -4 1.2 Yes 19 0.11 Yes -36 0.59 No 36 38.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 17531769 + NM_138401 MVB12A 1 2.05 1.08 45 11.39 99.45 29 5.29 No 37 -1.7 No 21 0.41 Yes -23 0.44 No 47 83.05 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 17534242 + NM_138401 MVB12A 1 0.42 0.21 14 7.74 86.91 33 6.63 Yes 20 -0.04 No 0 0 No -26 0.71 Yes 44 73.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17534277 + NM_138401 MVB12A 1 0.31 0.15 9 0.16 62.43 25 6.56 Yes 12 0.87 Yes 28 0.58 Yes -24 0.77 Yes 46 76.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17535388 + NM_138401 MVB12A 1 0.39 0.15 10 -6.48 0 19 4.36 No 72 -5.72 No 19 0.92 Yes -21 0.23 No 46 30.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 88722970 - NM_002461 MVD 1 0.63 0.79 38 8.44 87.04 69 7.78 Yes 74 0.37 No 24 0.74 Yes -24 0.79 Yes 46 82.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88723656 - NM_002461 MVD 1 4.36 5.49 70 9.07 90.98 19 5.92 Yes 63 1.58 Yes 18 0.57 Yes -23 0.56 No 45 50.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 88727046 - NM_002461 MVD 1 0.87 1.18 45 1.45 0 37 5.91 Yes 15 0.38 No 36 0.68 Yes -36 0.79 Yes 34 87.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88727247 - NM_002461 MVD 1 1.59 2.04 59 2.24 80.12 20 8.12 Yes 7 1.16 Yes 0 0 No -19 0.61 No 51 77.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 88727250 - NM_002461 MVD 1 0.39 0.56 28 3.6 85.02 17 7.94 Yes 4 1.2 Yes 25 0.34 Yes -27 0.37 No 54 52.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 88728576 - NM_002461 MVD 1 1.85 2.47 53 11.06 95.02 33 6.86 Yes 20 2.43 Yes 32 0.96 Yes -32 0.92 Yes 38 95.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88729190 - NM_002461 MVD 1 0.9 1.14 46 7.18 86.75 49 7.21 Yes 36 0.22 No 34 0.3 Yes -19 0.35 No 22 55.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 110016969 + NM_000431 MVK 1 1.34 0.89 41 4.19 0 37 6.33 Yes 72 0.75 No 29 0.59 Yes -29 0.87 Yes 41 81.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 29842282 + NM_001293204 MVP 1 0.04 0.1 7 -12.76 0 23 6.08 Yes 44 1.85 Yes 0 0 No -22 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 29842307 + NM_001293204 MVP 1 0.09 0.17 9 -14.36 0 27 5.74 Yes 69 1.84 Yes 0 0 No -26 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 29845636 + NM_001293204 MVP 1 0.12 0.22 12 -8.05 66.15 44 10.97 Yes 2 0.75 No 0 0 No -43 0.36 No 27 56.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 29845646 + NM_001293204 MVP 1 0.21 0.4 23 -2.02 0 19 4.34 No 41 0.72 No 0 0 No -18 0.63 No 17 36.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 42801313 + NM_001144925 MX1 1 0.01 0.11 8 2.95 0 18 4.47 No 5 1.24 Yes 0 0 No -17 0.94 Yes 53 92.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 42801383 + NM_001144925 MX1 1 0.42 3.15 68 6.92 86.07 22 6.29 Yes 9 1.3 Yes 26 0.61 Yes -25 0.91 Yes 45 92.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 42802462 + NM_001144925 MX1 1 0.01 0.11 8 -11.37 73.14 30 9.8 Yes 17 0.33 No 0 0 No -29 0.95 Yes 41 94.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 42802520 + NM_001144925 MX1 1 0.59 4.26 69 6.06 86.44 20 5.74 Yes 7 1.17 Yes 0 0 No -27 0.56 No 43 59.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 42803957 + NM_001144925 MX1 1 0.13 0.85 38 7.09 80.48 14 5.22 No 1 -0.6 No 25 0.83 Yes -25 0.68 Yes 45 58.66 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr21 42803957 + NM_001144925 MX1 1 3.3 20.01 72 7.09 80.48 14 5.22 No 1 -0.6 No 25 0.83 Yes -25 0.68 Yes 45 58.66 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr21 42803990 + NM_001144925 MX1 1 0.07 0.53 25 -2.62 75.66 17 3.29 No 4 0.26 No 0 0 No -22 0.87 Yes 48 77.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 42807310 + NM_001144925 MX1 1 0.08 0.82 33 2.99 75.81 47 6.7 Yes 34 0.34 No 0 0 No -46 0.74 Yes 24 86.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 42811625 + NM_001144925 MX1 1 0.01 0.14 9 3.31 0 28 6.91 Yes 32 1.12 Yes 0 0 No -27 0.81 Yes 43 76.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 42814528 + NM_001144925 MX1 1 0.14 1.19 44 4.87 82.77 18 5.57 Yes 73 0.86 Yes 0 0 No -24 0.59 No 46 52.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 42817375 + NM_001144925 MX1 1 0.06 0.75 35 -11.36 0 43 6.48 Yes 30 0.59 No 24 0.82 Yes -26 0.45 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 42817930 + NM_001144925 MX1 1 0.01 0.13 7 -1.8 0 24 6.89 Yes 11 1.75 Yes 0 0 No -29 0.87 Yes 41 91.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 42817947 + NM_001144925 MX1 1 0.03 0.29 20 4.19 80.33 26 4.25 No 28 1.74 Yes 0 0 No -25 0.67 Yes 24 67.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 42819040 + NM_001144925 MX1 1 2.65 21.92 72 6.29 92.03 27 4.68 No 46 -2.7 No 0 0 No -27 0.52 No 47 48.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 42821145 + NM_001144925 MX1 1 0.05 0.36 15 5.82 88.23 19 4.99 No 64 -4.8 No 0 0 No -20 0.68 Yes 52 62.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 42823117 + NM_001144925 MX1 1 0.02 0.11 7 7.89 87.02 30 5.74 Yes 36 0.92 Yes 0 0 No -29 0.65 No 41 54.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 42823095 + NM_001144925 MX1 1 0.04 0.32 20 -6.66 0 42 5.64 Yes 62 0.94 Yes 0 0 No -26 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 42823117 + NM_001144925 MX1 1 0.19 1.39 53 7.89 87.02 30 5.74 Yes 36 0.92 Yes 0 0 No -29 0.65 No 41 54.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 42824616 + NM_001144925 MX1 1 0.22 2.1 56 10.47 84.3 19 5.47 No 6 1.37 Yes 0 0 No -18 0.65 No 52 61.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 42826136 + NM_001144925 MX1 1 0.02 0.15 11 9.31 88.58 22 5.74 Yes 9 0.3 No 0 0 No -26 0.51 No 44 61.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 42826601 + NM_001144925 MX1 1 0.02 0.17 10 6.52 78.85 29 5.16 No -1 0.22 No 0 0 No -28 0.81 Yes 42 78.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 42830457 + NM_001144925 MX1 1 0.04 0.38 21 -6.84 81.59 23 6.38 Yes 35 1.21 Yes 0 0 No -22 0.43 No 23 81.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 42830499 + NM_001144925 MX1 1 0.02 0.19 13 6.08 83.3 21 5.56 Yes 52 0.97 Yes 0 0 No -24 0.82 Yes 46 81.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 42735195 + NM_002463 MX2 1 5.17 1.96 55 3.83 0 49 8.06 Yes 47 1.28 Yes 31 0.5 Yes -31 0.7 Yes 39 67.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr21 42738785 + NM_002463 MX2 1 3.33 1.26 43 8.07 87.92 32 7.34 Yes 61 1.79 Yes 0 0 No -31 0.69 Yes 39 85.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 42744860 + NM_002463 MX2 1 0.43 0.14 9 10.22 89.7 20 6.91 Yes 72 -3.06 No 25 0.39 Yes -25 0.59 No 45 64.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 42754341 + NM_002463 MX2 1 0.09 0.1 7 -0.39 0 44 6.76 Yes 31 0.4 No 0 0 No -43 0.86 Yes 27 89.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 42759052 + NM_002463 MX2 1 0.23 0.31 17 11.54 87.77 39 6.27 Yes 74 -1.8 No 0 0 No -38 0.53 No 32 67.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 42775461 + NM_002463 MX2 1 0.2 0.26 17 5.75 85.58 32 5.92 Yes 24 1.1 Yes 0 0 No -31 0.43 No 42 45.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 42775481 + NM_002463 MX2 1 0.14 0.21 14 5.65 89.04 23 5.1 No 44 1.1 Yes 0 0 No -22 0.94 Yes 48 93.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 70143255 + NM_002357 MXD1 1 0.96 0.14 9 3.34 77.69 26 7.75 Yes 13 1.36 Yes 0 0 No -25 0.82 Yes 45 82.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176737008 - NM_001142935 MXD3 1 2.98 0.71 38 9.54 81.06 10 6.56 Yes -3 0.95 Yes 0 0 No -38 0.66 No 47 58.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 2252426 - NM_006454 MXD4 1 0.56 0.75 34 0.48 73.29 31 6.78 Yes 18 2.43 Yes 0 0 No -30 0.75 Yes 40 79.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2257022 - NM_006454 MXD4 1 1.11 1.4 49 6.13 73.73 28 4.96 No 15 1 Yes 27 0.89 Yes -27 0.9 Yes 43 91.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2257079 - NM_006454 MXD4 1 0.49 0.49 24 2.95 0 30 6 Yes 48 -1.78 No 29 0.71 Yes -29 0.6 No 43 65.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 2257083 - NM_006454 MXD4 1 0.2 0.19 13 1.83 80.83 26 5.66 Yes 44 -1.77 No 29 0.71 Yes -25 0.64 No 45 62.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 2260785 - NM_006454 MXD4 1 0.21 0.25 15 9.08 74.98 23 5.39 No 10 1.19 Yes 22 0.88 Yes -22 0.82 Yes 48 81.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2262300 - NM_006454 MXD4 1 0.37 0.4 24 1.69 77.22 22 5 No 63 1.31 Yes 0 0 No -21 0.96 Yes 49 93.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 135502939 + NR_134962 MYB 1 0.81 0.13 7 5.01 87.32 29 5.92 Yes 24 -0.67 No 0 0 No -22 0.83 Yes 48 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 135518098 + NR_134962 MYB 1 4.25 2.49 60 9.54 84.36 30 5.82 Yes 67 0.85 Yes 29 0.85 Yes -29 0.9 Yes 41 82.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 135520663 + NR_134962 MYB 1 0.54 0.46 23 6.11 70.54 33 7.07 Yes 65 1.1 Yes 27 0.89 Yes -32 0.7 Yes 38 72.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 135524853 + NR_134962 MYB 1 0.27 0.17 8 9.43 79.55 44 6.92 Yes 63 0.65 No 31 0.7 Yes -38 0.49 No 32 68.6 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 135525461 + NR_134962 MYB 1 0.73 0.31 15 9.17 87.76 25 6.71 Yes 40 1.2 Yes 0 0 No -24 0.77 Yes 46 79.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4443738 - NM_001105538 MYBBP1A 1 0.32 0.43 23 6.66 80.48 37 5.3 No 24 -0.6 No 0 0 No -24 0.88 Yes 46 86.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4445816 - NM_001105538 MYBBP1A 1 0.52 0.78 36 0.85 0 18 4.58 No 54 1 Yes 0 0 No -36 0.9 Yes 34 96.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4448465 - NM_001105538 MYBBP1A 1 0.07 0.11 7 -10.54 0 16 3.01 No 17 1.4 Yes 25 0.51 Yes -29 0.92 Yes 41 87.86 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4451343 - NM_001105538 MYBBP1A 1 0.18 0.25 15 -1.7 0 18 4.36 No 37 0.68 No 0 0 No -30 0.39 No 39 27.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4457332 - NM_001105538 MYBBP1A 1 0.07 0.14 10 5.91 82.76 16 5.1 No 72 1.54 Yes 0 0 No -19 0.44 No 51 58.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 42299979 + NM_002466 MYBL2 1 0.2 0.24 15 5.12 85.02 19 5.48 No 6 1.12 Yes 0 0 No -18 0.66 Yes 52 80.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 42302347 + NM_002466 MYBL2 1 0.31 0.35 22 6.62 84.59 19 4.8 No 70 0.2 No 0 0 No -18 0.67 Yes 51 58.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 42315492 + NM_002466 MYBL2 1 0.04 0.18 12 -8.12 0 23 3.88 No 64 -3.42 No 0 0 No -21 0.64 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 42318890 + NM_002466 MYBL2 1 0.1 0.28 15 3.89 84.17 27 5.2 No 14 -0.18 No 0 0 No -26 0.71 Yes 11 30.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 42320760 + NM_002466 MYBL2 1 0.48 1.33 51 6.36 76.96 19 5.11 No 6 1.31 Yes 25 0.82 Yes -27 0.72 Yes 43 82.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 42320775 + NM_002466 MYBL2 1 0.28 0.89 34 -1.65 66.58 20 4.69 No 21 1.29 Yes 25 0.82 Yes -19 0.58 No 28 52.29 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 42334523 + NM_002466 MYBL2 1 0.03 0.14 10 5.2 85.02 18 5.37 No 10 1.46 Yes 0 0 No -22 0.92 Yes 48 91.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 42337561 + NM_002466 MYBL2 1 0.03 0.11 7 9.26 89.36 35 6.85 Yes 22 1.12 Yes 0 0 No -24 0.94 Yes 46 92.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 42338578 + NM_002466 MYBL2 1 0.09 0.29 15 5.53 71.9 14 6.32 Yes NA NA NA 29 0.8 Yes -29 0.69 Yes 35 36.75 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 42340133 + NM_002466 MYBL2 1 0.04 0.14 8 -0.93 0 15 3.38 No 22 1.2 Yes 0 0 No -34 0.9 Yes 36 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 42341943 + NM_002466 MYBL2 1 0.05 0.25 15 2.42 88.59 22 4.8 No 9 0.83 Yes 0 0 No -21 0.97 Yes 49 98.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 42342072 + NM_002466 MYBL2 1 0.05 0.28 16 5.76 90.92 59 8.3 Yes 46 1.76 Yes 0 0 No -27 0.45 No 12 83.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 42343802 + NM_002466 MYBL2 1 0.91 5.07 71 6.29 79.61 27 5.67 Yes 43 1.59 Yes 0 0 No -24 0.59 No 46 47.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 42343860 + NM_002466 MYBL2 1 0.08 0.47 25 2.37 0 19 4.55 No 58 0.33 No 0 0 No -18 0.92 Yes 52 90.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 42344532 + NM_002466 MYBL2 1 0.03 0.11 8 8.46 87.76 22 5.66 Yes 9 1.22 Yes 0 0 No -24 0.85 Yes 46 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 128750496 + NM_002467 MYC 1 20.51 70.57 72 5.37 76.22 42 6.13 Yes 29 1 Yes 34 0.71 Yes -37 0.7 Yes 33 68.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 128750525 + NM_002467 MYC 1 0.09 0.25 15 3.06 65.4 21 6.14 Yes 58 0.99 Yes 20 0.88 Yes -34 0.51 No 50 22.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 128750537 + NM_002467 MYC 1 0.61 2.29 55 4.38 0 21 4.51 No 70 0.98 Yes 20 0.88 Yes -20 0.9 Yes 50 68.23 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 128752643 + NM_002467 MYC 1 0.55 1.19 45 -5.59 80.07 33 4.16 No 47 0.75 No 30 0.79 Yes -32 0.62 No 38 64.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 39338418 - NM_012333 MYCBP 1 0.1 0.17 11 4.86 84.56 27 6.04 Yes 14 0.37 No 0 0 No -26 0.94 Yes 44 86.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 39338421 - NM_012333 MYCBP 1 0.44 0.68 38 6.66 88.23 24 5.82 Yes 11 0.37 No 0 0 No -23 0.91 Yes 47 85.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 77626689 - NM_015057 MYCBP2 1 0.16 0.24 15 8.51 97.81 33 8.01 Yes 26 0.79 Yes 0 0 No -32 0.84 Yes 38 95.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77628143 - NM_015057 MYCBP2 1 0.13 0.21 11 9.27 91.11 59 8.08 Yes 46 1.28 Yes 0 0 No -27 0.33 No 50 43.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 77631199 - NM_015057 MYCBP2 1 0.05 0.1 7 7.29 87.25 18 5.29 No 71 1.13 Yes 0 0 No -56 0.75 Yes 53 58.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 77631218 - NM_015057 MYCBP2 1 0.09 0.17 11 -1.6 0 19 3.3 No 52 1.13 Yes 0 0 No -37 0.74 Yes 33 91.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77640242 - NM_015057 MYCBP2 1 0.26 0.51 26 5.18 72.83 56 9.73 Yes 43 1.27 Yes 21 0.63 Yes -21 0.5 No 42 58.96 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 77641840 - NM_015057 MYCBP2 1 0.14 0.25 13 5.84 71.69 28 5.83 Yes 51 0.59 No 0 0 No -27 0.74 Yes 43 56.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 77651506 - NM_015057 MYCBP2 1 0.16 0.22 14 3.39 80.37 24 4.27 No 38 0.82 Yes 0 0 No -23 0.76 Yes 47 79.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77654448 - NM_015057 MYCBP2 1 0.25 0.38 20 9.22 93.87 62 8.53 Yes 36 0.86 Yes 0 0 No -22 0.67 Yes 48 81.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77663164 - NM_015057 MYCBP2 1 1.26 2.82 66 0.83 73.18 27 7.39 Yes 11 0.75 No 0 0 No -26 0.69 Yes 44 83.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 77664394 - NM_015057 MYCBP2 1 0.11 0.21 12 0.42 0 38 6.63 Yes 25 0.84 Yes 0 0 No -37 0.84 Yes 33 86.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77667419 - NM_015057 MYCBP2 1 0.2 0.36 22 4.1 82.02 15 5.1 No 63 -3.56 No 0 0 No -23 0.52 No 50 58.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77668904 - NM_015057 MYCBP2 1 0.65 1.1 43 7.05 86.09 13 5.2 No 65 -5.43 No 0 0 No -22 0.63 No 48 60.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77677446 - NM_015057 MYCBP2 1 0.36 0.5 26 8.63 83.45 55 10.73 Yes 42 1.16 Yes 38 0.27 Yes -42 0.39 No 28 42.38 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 77692631 - NM_015057 MYCBP2 1 21.54 28.97 72 8.35 91.74 20 5.74 Yes 7 1.2 Yes 22 0.86 Yes -26 0.54 No 44 56.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 77692655 - NM_015057 MYCBP2 1 9.89 13.38 72 -7.14 0 12 2.69 No 47 0.24 No 39 0.24 Yes -39 0.37 No 17 48.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 77694653 - NM_015057 MYCBP2 1 0.07 0.1 7 7.76 79.08 35 7.38 Yes 22 0.52 No 0 0 No -34 0.41 No 41 53.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77700621 - NM_015057 MYCBP2 1 5.97 7.56 72 8.97 86.75 19 5.54 No 26 1.18 Yes 0 0 No -27 0.57 No 43 31.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 77701615 - NM_015057 MYCBP2 1 0.19 0.24 14 7.24 82.55 29 4.16 No 2 0.29 No 0 0 No -28 0.32 No 49 46.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77703366 - NM_015057 MYCBP2 1 18.47 23.53 72 4.83 84.03 32 7.86 Yes 19 1 Yes 31 0.64 Yes -31 0.73 Yes 39 84.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 77724679 - NM_015057 MYCBP2 1 0.21 0.35 19 8.75 86.82 29 4.86 No 32 0.44 No 0 0 No -28 0.82 Yes 42 92.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 77730342 - NM_015057 MYCBP2 1 0.06 0.1 7 0.79 0 41 6.62 Yes 28 0.93 Yes 22 0.65 Yes -40 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 77730860 - NM_015057 MYCBP2 1 0.62 0.94 38 8.21 78.51 23 4.84 No -1 0.44 No 0 0 No -29 0.46 No 48 62.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77734514 - NM_015057 MYCBP2 1 0.89 1.78 49 7.76 83.06 31 6.89 Yes 57 0.57 No 0 0 No -30 0.62 No 40 72.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 77738699 - NM_015057 MYCBP2 1 0.06 0.1 7 1.04 78.72 65 7.38 Yes 21 0.32 No 28 0.62 Yes -36 0.41 No 34 65.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 77748649 - NM_015057 MYCBP2 1 0.13 0.22 14 0.55 61.25 30 6.71 Yes 17 -1.03 No 28 0.42 Yes -27 0.47 No 29 55.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 77751969 - NM_015057 MYCBP2 1 0.08 0.15 10 5.02 82.39 22 7.48 Yes 9 1.66 Yes 0 0 No -21 0.89 Yes 49 90.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77751972 - NM_015057 MYCBP2 1 0.06 0.13 8 5.47 83.05 19 7.28 Yes 6 1.67 Yes 0 0 No -18 0.87 Yes 52 90.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77759507 - NM_015057 MYCBP2 1 2.39 4.58 71 1.15 0 11 3.87 No 55 0.8 Yes 0 0 No -36 0.47 No 34 66.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 77760211 - NM_015057 MYCBP2 1 0.18 0.25 12 1.44 0 21 8.9 Yes 8 0.82 Yes 32 0.78 Yes -20 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 77765947 - NM_015057 MYCBP2 1 0.2 0.32 20 -2.48 81.81 19 5.03 No 2 1.32 Yes 0 0 No -22 0.83 Yes 52 68.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 77779540 - NM_015057 MYCBP2 1 0.08 0.14 8 3.25 71.99 29 7.31 Yes -3 -2.02 No 29 0.48 Yes -35 0.6 No 35 79.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr13 77782398 - NM_015057 MYCBP2 1 0.17 0.26 15 1.85 86.64 20 4.78 No 16 0.39 No 0 0 No -24 0.69 Yes 46 74.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 77798687 - NM_015057 MYCBP2 1 0.16 0.17 12 -3.19 47.08 37 5.21 No 47 0.23 No 22 0.52 Yes -19 0.26 No 34 14.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 77801293 - NM_015057 MYCBP2 1 7.52 7.96 71 9.95 88.39 23 5.39 No 38 0.86 Yes 0 0 No -28 0.78 Yes 42 81.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77801293 - NM_015057 MYCBP2 1 0.58 0.64 34 9.95 88.39 23 5.39 No 38 0.86 Yes 0 0 No -28 0.78 Yes 42 81.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77804343 - NM_015057 MYCBP2 1 0.16 0.19 10 6.34 92.49 26 5.66 Yes 41 1.17 Yes 0 0 No -23 0.48 No 47 51.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 77808276 - NM_015057 MYCBP2 1 0.2 0.33 17 10.08 88.85 22 5.12 No 13 0.94 Yes 0 0 No -25 0.46 No 45 61.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 77809317 - NM_015057 MYCBP2 1 0.28 0.46 23 10.33 82.9 36 5.6 Yes 30 0.77 Yes 0 0 No -35 0.91 Yes 35 92.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77831927 - NM_015057 MYCBP2 1 0.06 0.15 11 3.28 85.74 27 5.19 No 46 1 Yes 0 0 No -26 0.55 No 44 73.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 77835509 - NM_015057 MYCBP2 1 0.08 0.15 7 -15.86 0 29 6.63 Yes 71 1.33 Yes 0 0 No -29 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 77840105 - NM_015057 MYCBP2 1 1.14 2.75 66 4.72 70.98 31 5.64 Yes 61 0.36 No 0 0 No -28 0.33 No 42 50.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77846535 - NM_015057 MYCBP2 1 0.91 2.26 59 5.77 82.99 22 4.62 No 9 0.15 No 31 0.87 Yes -31 0.86 Yes 39 93.04 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 77847701 - NM_015057 MYCBP2 1 0.88 1.46 52 8.49 77.69 30 5.82 Yes 17 1.25 Yes 0 0 No -29 0.69 Yes 41 73.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 77847790 - NM_015057 MYCBP2 1 0.06 0.13 8 3.31 0 19 4.58 No 21 0.29 No 0 0 No -38 0.53 No 52 45.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77847802 - NM_015057 MYCBP2 1 0.11 0.19 13 -10.68 76.07 26 6.72 Yes 9 0.27 No 0 0 No -26 0.55 No 45 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 77853073 - NM_015057 MYCBP2 1 0.17 0.33 19 -0.72 65.6 22 4.71 No 57 -5.07 No 32 0.77 Yes -18 0.55 No 52 62.55 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 77864940 - NM_015057 MYCBP2 1 0.55 0.97 39 5.91 74.66 29 5.85 Yes 6 0.59 No 0 0 No -28 0.66 No 42 83.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 77866478 - NM_015057 MYCBP2 1 1.37 2.29 64 6.4 85.71 27 5.74 Yes 50 0.26 No 0 0 No -26 0.92 Yes 44 91.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 38182858 + NM_001172567 MYD88 1 0.07 0.17 11 10.44 87.85 71 8.61 Yes 58 0.44 No 0 0 No -27 0.71 Yes 35 52.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 48444313 - NM_016132 MYEF2 1 0.6 0.19 12 3.94 80.93 30 5.63 Yes 69 0.58 No 0 0 No -29 0.78 Yes 41 85.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 48450096 - NM_016132 MYEF2 1 3.48 1.25 47 5.03 69.46 33 6.21 Yes 20 1.15 Yes 32 0.72 Yes -32 0.79 Yes 38 87.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 48455091 - NM_016132 MYEF2 1 15.81 8.49 71 6.26 71.75 34 6.86 Yes 21 1.13 Yes 28 0.79 Yes -33 0.26 No 37 66.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 8409986 - NM_005964 MYH10 1 0.48 0.11 8 10.04 88.46 18 7.62 Yes 5 1.44 Yes 0 0 No -23 0.32 No 47 56.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 8444518 - NM_005964 MYH10 1 0.32 0.21 12 7.78 82.71 38 7.8 Yes 25 0.68 No 0 0 No -37 0.61 No 33 88.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 8479991 - NM_005964 MYH10 1 1.47 0.68 28 4.98 74.66 32 7.34 Yes 19 1.92 Yes 31 0.96 Yes -31 0.87 Yes 39 92.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8483442 - NM_005964 MYH10 1 0.48 0.14 7 11.23 100 17 5.25 No 4 0.89 Yes 0 0 No -27 0.32 No 54 39.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 8526816 - NM_005964 MYH10 1 17.69 3.92 56 9.28 90.03 45 8.05 Yes 32 2.11 Yes 44 0.59 Yes -44 0.75 Yes 26 82.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 36680282 - NM_002473 MYH9 1 0.01 0.1 7 1.09 68.01 27 5.47 No 52 1.27 Yes 0 0 No -26 0.69 Yes 44 22.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 36680354 - NM_002473 MYH9 1 0.11 1.06 45 2.01 70.26 18 5.83 Yes 5 0.56 No 27 0.52 Yes -17 0.78 Yes 53 68.29 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 36691762 - NM_002473 MYH9 1 0.02 0.18 12 -15.53 66.5 42 6.97 Yes 63 0.6 No 0 0 No -24 0.59 No 46 63.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 36695083 - NM_002473 MYH9 1 0.01 0.13 9 -4.77 0 9 3.87 No 21 0.97 Yes 0 0 No -33 0.71 Yes 37 71.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 36700321 - NM_002473 MYH9 1 0.02 0.21 11 8.65 91.41 12 5.29 No 45 -0.81 No 0 0 No -21 0.3 No 51 39.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 36701147 - NM_002473 MYH9 1 0.03 0.25 15 -7.21 0 28 5.57 Yes 15 1.14 Yes 0 0 No -27 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 36701800 - NM_002473 MYH9 1 0.05 0.42 24 11.37 89.25 29 6.77 Yes 36 1.14 Yes 0 0 No -32 0.69 Yes 42 72.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 36708264 - NM_002473 MYH9 1 0.03 0.26 14 3.64 0 23 5.42 No 10 1.6 Yes 0 0 No -32 0.58 No 48 78.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 36710346 - NM_002473 MYH9 1 0.02 0.24 14 1.81 74.5 16 5.2 No 28 1.8 Yes 0 0 No -40 0.81 Yes 30 94.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 36720714 - NM_002473 MYH9 1 0.06 0.5 26 10.52 88.42 25 5.48 No 25 0.54 No 0 0 No -24 0.81 Yes 46 73.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 36782606 - NM_002473 MYH9 1 0.04 0.32 19 9.86 83.54 27 7 Yes 14 0.76 No 0 0 No -26 0.95 Yes 44 95.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56552464 + NM_021019 MYL6 1 0.14 3.97 70 -0.67 72.54 22 6 Yes 9 2.36 Yes 21 0.95 Yes -21 0.73 Yes 49 93.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56552685 + NM_021019 MYL6 1 0.26 9.56 72 11.31 78.01 31 7.45 Yes 18 1.75 Yes 30 0.95 Yes -30 0.96 Yes 40 84.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56553254 + NM_021019 MYL6 1 0.04 1.36 44 -0.73 79.54 20 4.08 No 38 -3.57 No 19 0.41 Yes -20 0.75 Yes 50 83.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56553281 + NM_021019 MYL6 1 0.12 4.26 69 5.46 85.17 21 5.1 No 65 -3.86 No 19 0.41 Yes -19 0.66 No 51 77.35 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 56553372 + NM_021019 MYL6 1 0.03 1.18 47 -11.35 66.75 42 7.77 Yes 10 1.23 Yes 31 0.4 Yes -22 0.62 No 48 67.61 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 56553378 + NM_021019 MYL6 1 0.01 0.26 18 -9.84 0 11 3.87 No 16 1.18 Yes 31 0.4 Yes -47 0.45 No 42 62.2 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 56553406 + NM_021019 MYL6 1 0.02 0.78 34 6.14 79.49 10 4.88 No 44 1.19 Yes 31 0.4 Yes -56 0.52 No 14 40.98 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 56553808 + NM_021019 MYL6 1 0.01 0.21 12 6.06 79.36 24 5.48 No 62 1.99 Yes 23 0.86 Yes -23 0.67 Yes 47 75.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56553760 + NM_021019 MYL6 1 0.01 0.14 8 -3.85 70.61 27 7.57 Yes 14 2.01 Yes 0 0 No -26 0.87 Yes 44 89.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56553808 + NM_021019 MYL6 1 0.01 0.21 13 6.06 79.36 24 5.48 No 62 1.99 Yes 23 0.86 Yes -23 0.67 Yes 47 75.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56555172 + NM_021019 MYL6 1 0.34 0.19 13 -7.68 73.86 25 7 Yes 12 1.27 Yes 0 0 No -24 0.97 Yes 46 96.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56549698 + NM_001199629 MYL6B 1 0.49 0.88 35 2.58 77.46 40 7.42 Yes 27 1.04 Yes 42 0.27 Yes -39 0.84 Yes 31 84.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56549701 + NM_001199629 MYL6B 1 0.38 0.71 33 -0.37 75.42 43 7.62 Yes 30 1.04 Yes 42 0.27 Yes -42 0.82 Yes 28 86.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56551697 + NM_001199629 MYL6B 1 0.14 0.26 15 4.24 78.7 29 5.92 Yes NA NA NA 0 0 No -28 0.66 No 17 58.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 35176529 + NM_006097 MYL9 1 1.93 0.22 14 -2.85 60.56 31 7.35 Yes 18 0.34 No 0 0 No -30 0.88 Yes 40 89.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 169496671 + NM_001185119 MYNN 1 12.57 5.49 71 7.21 90.58 16 6.48 Yes 3 1.72 Yes 22 0.58 Yes -22 0.66 No 48 63.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 169497121 + NM_001185119 MYNN 1 0.63 0.14 9 5.6 71.63 26 5.48 No 13 0.67 No 0 0 No -25 0.86 Yes 45 82.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 27412667 - NM_001346768 MYO18A 1 0.12 0.1 7 9.33 87.86 54 9.22 Yes 41 0.8 Yes 0 0 No -22 0.86 Yes 48 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27443471 - NM_001346768 MYO18A 1 0.45 0.26 14 -1.15 68.48 52 8.78 Yes 39 1.9 Yes 0 0 No -51 0.48 No 19 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 27444729 - NM_001346768 MYO18A 1 0.39 0.18 12 8.87 85.51 29 7.07 Yes 16 1.71 Yes 0 0 No -28 0.75 Yes 42 64.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 27444924 - NM_001346768 MYO18A 1 0.98 0.5 25 7.7 82.34 34 6.15 Yes 21 1.02 Yes 0 0 No -33 0.86 Yes 37 76.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27445454 - NM_001346768 MYO18A 1 0.67 0.47 24 -1.31 0 27 6.71 Yes 14 1.98 Yes 0 0 No -26 0.76 Yes 44 90.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27447688 - NM_001346768 MYO18A 1 0.35 0.19 13 7.25 82.34 27 6.96 Yes 14 0.78 Yes 0 0 No -26 0.9 Yes 44 77.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34857742 - NM_001163735 MYO19 1 0.79 0.5 23 6.96 84.4 42 7.32 Yes 29 0.71 No 23 0.93 Yes -23 0.96 Yes 47 95.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 34857802 - NM_001163735 MYO19 1 2.62 1.93 59 10.45 77.93 65 7.75 Yes 52 1.55 Yes 37 0.33 Yes -37 0.76 Yes 33 83.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 34860028 - NM_001163735 MYO19 1 0.26 0.1 7 3.04 82.98 22 4.69 No 59 -4.48 No 0 0 No -21 0.81 Yes 49 80.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 34863421 - NM_001163735 MYO19 1 0.45 0.22 14 -3.17 0 64 7.08 Yes 51 0.94 Yes 0 0 No -55 0.62 No 15 58.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 34866817 - NM_001163735 MYO19 1 0.59 0.18 11 4.98 76.57 27 6.04 Yes 52 0.74 No 0 0 No -26 0.73 Yes 44 82.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 34866854 - NM_001163735 MYO19 1 0.55 0.19 11 5.57 90.2 18 4.47 No 55 1.91 Yes 0 0 No -27 0.67 Yes 43 77.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34868618 - NM_001163735 MYO19 1 0.65 0.26 17 -2.02 0 37 5.97 Yes 24 1.79 Yes 0 0 No -36 0.71 Yes 34 84.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34868623 - NM_001163735 MYO19 1 3.04 1.39 46 9.71 78.54 32 5.65 Yes 19 1.81 Yes 31 0.94 Yes -31 0.75 Yes 39 83.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 34868857 - NM_001163735 MYO19 1 0.21 0.1 7 -6.51 0 18 3.68 No 49 1.45 Yes 0 0 No -48 0.61 No 22 83.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 34870979 - NM_001163735 MYO19 1 0.25 0.25 14 -2.78 63.76 21 4.69 No 60 -4.51 No 0 0 No -21 0.45 No 47 48.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 34871039 - NM_001163735 MYO19 1 0.17 0.17 9 -2.3 59.56 13 4.79 No 72 -5.56 No 20 0.58 Yes -40 0.85 Yes 30 38.98 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 34871131 - NM_001163735 MYO19 1 0.11 0.11 7 -2.15 0 17 4.35 No 76 1.3 Yes 0 0 No -16 0.47 No 54 32.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 34883288 - NM_001163735 MYO19 1 0.73 0.79 30 3.57 79.09 30 6.32 Yes 32 1.63 Yes 0 0 No -29 0.57 No 41 73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 34883659 - NM_001163735 MYO19 1 0.24 0.21 13 9.64 96.74 26 5.35 No 19 0.35 No 0 0 No -25 0.64 No 45 65.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 34886899 - NM_001163735 MYO19 1 4.03 3.31 66 8.23 87.56 28 6.65 Yes 15 0.86 Yes 0 0 No -30 0.47 No 40 71.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 34887700 - NM_001163735 MYO19 1 0.96 0.78 34 3.25 77.99 19 6.28 Yes 6 2 Yes 0 0 No -26 0.96 Yes 44 96.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34889251 - NM_001163735 MYO19 1 0.16 0.15 10 4.03 73.84 15 5.03 No 68 1.3 Yes 25 0.94 Yes -25 0.78 Yes 45 80.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 1370609 - NM_001080779 MYO1C 1 0.05 0.11 8 -0.46 69.77 17 4.69 No 34 1.96 Yes 0 0 No -46 0.85 Yes 24 41.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 1370622 - NM_001080779 MYO1C 1 0.08 0.21 13 4.4 85.77 11 3.43 No 21 1.98 Yes 0 0 No -33 0.74 Yes 37 88.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1371597 - NM_001080779 MYO1C 1 0.1 0.24 14 -4.33 0 15 3.87 No 22 2.02 Yes 0 0 No -34 0.8 Yes 36 79.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1371606 - NM_001080779 MYO1C 1 0.1 0.25 15 -6.1 0 26 8.54 Yes 13 2.05 Yes 28 0.89 Yes -25 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 1371609 - NM_001080779 MYO1C 1 0.36 0.79 37 -3.53 63.86 23 8.37 Yes 10 2.06 Yes 28 0.89 Yes -22 0.79 Yes 48 81.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 1374082 - NM_001080779 MYO1C 1 0.19 0.31 12 5.65 84.41 43 6.82 Yes 30 1.18 Yes 32 0.9 Yes -32 0.8 Yes 38 85.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 1375287 - NM_001080779 MYO1C 1 0.16 0.25 16 5.52 80.88 13 4.27 No 44 2.02 Yes 0 0 No -23 0.89 Yes 14 50.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 1383914 - NM_001080779 MYO1C 1 0.05 0.13 9 -0.4 0 9 3.87 No 71 -3.53 No 0 0 No -25 0.73 Yes 45 76.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1386969 - NM_001080779 MYO1C 1 0.16 0.29 17 5.07 70.19 48 7.67 Yes 9 -1.47 No 0 0 No -45 0.76 Yes 25 89.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1387309 - NM_001080779 MYO1C 1 0.06 0.11 8 5.41 90.92 26 4.25 No 3 0.8 Yes 0 0 No -25 0.73 Yes 17 69.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 30837871 - NM_015194 MYO1D 1 2.84 0.81 38 2.17 77.51 19 5.15 No 50 1.19 Yes 0 0 No -18 0.55 No 52 53.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 30846790 - NM_015194 MYO1D 1 1.09 0.36 17 10.55 86.57 30 5.57 Yes 17 1.89 Yes 0 0 No -29 0.83 Yes 41 95.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30867339 - NM_015194 MYO1D 1 1.42 0.32 16 2.82 0 35 6.99 Yes 22 1.09 Yes 0 0 No -34 0.76 Yes 36 84.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30867341 - NM_015194 MYO1D 1 1.15 0.25 13 -12.04 0 33 6.89 Yes 20 1.08 Yes 0 0 No -32 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 30869630 - NM_015194 MYO1D 1 1.47 0.38 22 10.8 86.44 28 7.48 Yes 15 2.53 Yes 0 0 No -27 0.93 Yes 43 95.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30895193 - NM_015194 MYO1D 1 0.3 0.11 7 5.72 74.35 38 6.24 Yes 25 2.1 Yes 0 0 No -37 0.73 Yes 33 80.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30921585 - NM_015194 MYO1D 1 12.66 3.57 68 6.94 83.59 21 5.63 Yes 40 0.03 No 32 0.69 Yes -23 0.34 No 47 47.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 30927670 - NM_015194 MYO1D 1 3.86 1.04 40 6.5 79.91 23 6.06 Yes 10 0.76 No 0 0 No -22 0.83 Yes 48 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 30929757 - NM_015194 MYO1D 1 0.87 0.26 15 10.31 93.6 28 5.38 No 15 0.69 No 24 0.21 Yes -27 0.7 Yes 43 73.35 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 30980963 - NM_015194 MYO1D 1 0.41 0.17 9 4.11 77.11 32 6.65 Yes 28 1.48 Yes 0 0 No -31 0.96 Yes 39 95.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 31035655 - NM_015194 MYO1D 1 0.18 0.13 7 5.94 79.08 29 7.72 Yes 16 0.83 Yes 0 0 No -28 0.89 Yes 42 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 31041956 - NM_015194 MYO1D 1 0.33 0.22 14 9.48 84.59 53 8.14 Yes 40 0.79 Yes 0 0 No -39 0.5 No 18 54.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 31044817 - NM_015194 MYO1D 1 0.47 0.22 13 8.26 84.28 43 4.23 No 43 0.41 No 0 0 No -24 0.81 Yes 46 84.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 31061924 - NM_015194 MYO1D 1 0.8 0.49 25 8.55 85.02 26 6.08 Yes 69 1.45 Yes 25 0.78 Yes -25 0.75 Yes 45 86.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 31063866 - NM_015194 MYO1D 1 0.67 0.36 22 5.95 76.2 27 5.74 Yes 27 1.05 Yes 0 0 No -26 0.92 Yes 44 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 31113811 - NM_015194 MYO1D 1 2.04 0.65 34 6.47 89.42 25 5.2 No 32 2.39 Yes 0 0 No -24 0.51 No 46 72.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 59437016 - NM_004998 MYO1E 1 0.15 0.28 14 4.94 76.71 27 6.08 Yes 44 0.4 No 0 0 No -26 0.89 Yes 44 91.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 59469800 - NM_004998 MYO1E 1 0.88 1.21 46 8.03 77.48 23 5.11 No 1 0.73 No 0 0 No -22 0.52 No 48 41.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59480899 - NM_004998 MYO1E 1 0.07 0.11 7 -0.82 0 44 7.45 Yes 46 1.19 Yes 0 0 No -25 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 59483501 - NM_004998 MYO1E 1 0.24 0.44 24 2 68.82 83 9.83 Yes 70 1.8 Yes 0 0 No -57 0.05 No 12 3.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 59510260 - NM_004998 MYO1E 1 0.27 0.47 23 7.23 74.76 24 5.48 No 38 0.59 No 0 0 No -29 0.58 No 47 52.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59518839 - NM_004998 MYO1E 1 0.05 0.1 7 6.02 83.48 20 7.14 Yes 7 1.21 Yes 0 0 No -19 0.67 Yes 51 86.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59538044 - NM_004998 MYO1E 1 0.16 0.28 18 7.7 83.37 26 5.99 Yes 13 0.74 No 0 0 No -28 0.9 Yes 42 96.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 59551047 - NM_004998 MYO1E 1 0.07 0.17 11 0.68 66.65 39 7.48 Yes 26 1.44 Yes 0 0 No -38 0.89 Yes 32 86.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59552133 - NM_004998 MYO1E 1 0.35 0.89 34 9.5 85.95 22 7.17 Yes 9 0.95 Yes 0 0 No -24 0.49 No 49 62.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 59553750 - NM_004998 MYO1E 1 0.05 0.11 8 1.29 55.32 33 7.27 Yes 37 -3.1 No 29 0.52 Yes -18 0.61 No 38 57.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 59563434 - NM_004998 MYO1E 1 0.23 0.46 25 3.51 78.96 30 4.26 No 9 0.22 No 0 0 No -22 0.77 Yes 48 79.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 59650629 - NM_004998 MYO1E 1 0.67 0.74 34 7.17 82.34 28 5.57 Yes 46 1.4 Yes 0 0 No -28 0.68 Yes 42 70.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 45003744 - NM_033054 MYO1G 1 0.04 0.15 11 -2.25 66.93 16 5.19 No 3 0.49 No 0 0 No -24 0.65 No 48 26.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 45003777 - NM_033054 MYO1G 1 1.15 4.5 72 -4.07 0 14 4.47 No 14 -0.8 No 28 0.19 Yes -16 0.52 No 54 35.71 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 45004100 - NM_033054 MYO1G 1 0.04 0.17 10 2.55 72.29 13 5.29 No 0 0.64 No 0 0 No -21 0.75 Yes 49 76.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 45004146 - NM_033054 MYO1G 1 0.07 0.28 15 2.32 72.18 17 4.81 No 4 0.05 No 29 0.71 Yes -30 0.67 Yes 35 53.69 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 45005914 - NM_033054 MYO1G 1 0.04 0.18 12 9.98 88.94 14 5.91 Yes 1 0.25 No 25 0.67 Yes -16 0.37 No 54 61.75 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 45007369 - NM_033054 MYO1G 1 0.04 0.21 14 2.89 80.37 32 6.16 Yes 36 -2.38 No 29 0.34 Yes -28 0.72 Yes 30 72.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 45007509 - NM_033054 MYO1G 1 0.04 0.18 12 7.31 95.76 24 4.8 No 58 1.44 Yes 0 0 No -24 0.4 No 49 45.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 45008645 - NM_033054 MYO1G 1 0.22 0.86 39 2.39 66.14 22 5.22 No 58 -3.25 No 0 0 No -22 0.41 No 58 21.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 45009096 - NM_033054 MYO1G 1 0.12 0.5 26 5.31 77.97 40 6.48 Yes 27 -0.22 No 20 0.93 Yes -24 0.67 Yes 44 63.82 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 45009352 - NM_033054 MYO1G 1 0.09 0.25 15 9.33 84.24 18 6.77 Yes 5 2.1 Yes 0 0 No -17 0.69 Yes 53 75.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 45009352 - NM_033054 MYO1G 1 0.05 0.11 7 9.33 84.24 18 6.77 Yes 5 2.1 Yes 0 0 No -17 0.69 Yes 53 75.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 45009771 - NM_033054 MYO1G 1 0.03 0.1 7 3.04 76 17 5.07 No 58 -2.11 No 21 0.93 Yes -20 0.53 No 50 42.48 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 45009789 - NM_033054 MYO1G 1 0.03 0.11 7 2.71 70.45 21 6.04 Yes 40 -2.13 No 21 0.93 Yes -23 0.64 No 47 55.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 45010333 - NM_033054 MYO1G 1 0.34 1.28 48 2.49 0 14 5.57 Yes 45 -1.57 No 0 0 No -24 0.79 Yes 46 83.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 45010355 - NM_033054 MYO1G 1 0.08 0.28 15 -19.89 0 13 2.89 No 23 -1.85 No 24 0.66 Yes -12 0.49 No 18 46.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 45011874 - NM_033054 MYO1G 1 0.3 1.29 49 8.26 82.63 36 6.48 Yes 66 2.3 Yes 35 0.14 Yes -36 0.63 No 34 58.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 45013554 - NM_033054 MYO1G 1 0.91 3.82 70 4.26 0 19 4.47 No 38 2.19 Yes 0 0 No -21 0.45 No 47 60.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 45013565 - NM_033054 MYO1G 1 0.07 0.28 19 -3.6 0 13 4.36 No 27 2.19 Yes 0 0 No -12 0.35 No 58 25.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 45014191 - NM_033054 MYO1G 1 0.03 0.1 7 8.84 84.07 22 7.42 Yes 75 -2.03 No 0 0 No -21 0.66 No 49 44.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 45016607 - NM_033054 MYO1G 1 0.13 0.57 29 4.86 78.91 30 4.41 No 75 0.94 Yes 0 0 No -29 0.68 Yes 41 44.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 45017513 - NM_033054 MYO1G 1 0.05 0.22 12 7.66 78.32 21 6.16 Yes 8 1.31 Yes 0 0 No -20 0.84 Yes 50 90.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 171162288 + NM_001083615 MYO3B 1 2.82 0.42 21 7.38 83.74 47 6.17 Yes 16 0.28 No 0 0 No -35 0.45 No 35 64.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 52624034 - NM_000259 MYO5A 1 0.08 0.15 10 4.32 72.83 13 5.33 No 0 1.82 Yes 0 0 No -32 0.56 No 50 70.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 52630082 - NM_000259 MYO5A 1 79.26 48.69 72 8.04 86.33 27 5.09 No 51 0.67 No 19 0.3 Yes -19 0.42 No 51 41.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 52638918 - NM_000259 MYO5A 1 0.34 0.26 18 6.77 94.21 14 4.58 No 1 0.66 No 0 0 No -20 0.62 No 50 77.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 52644125 - NM_000259 MYO5A 1 0.09 0.11 7 5.57 82.44 29 5.51 No 23 1.15 Yes 0 0 No -28 0.85 Yes 42 63.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 52645852 - NM_000259 MYO5A 1 0.13 0.17 9 -2.24 0 17 5.31 No 4 1 Yes 0 0 No -27 0.35 No 32 56.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 52663283 - NM_000259 MYO5A 1 0.08 0.11 7 4.19 80.97 15 5.37 No 2 1.72 Yes 0 0 No -14 0.41 No 56 50.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 52663308 - NM_000259 MYO5A 1 0.09 0.11 8 13.59 92.09 33 4.63 No 66 -2.06 No 0 0 No -32 0.27 No 34 40.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 52669143 - NM_000259 MYO5A 1 0.83 0.9 39 9.41 91.06 64 5.96 Yes 37 0.82 Yes 0 0 No -24 0.91 Yes 46 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52673499 - NM_000259 MYO5A 1 0.2 0.15 10 -2.37 61.55 40 6.71 Yes 27 0.95 Yes 0 0 No -39 0.92 Yes 31 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52673502 - NM_000259 MYO5A 1 0.95 0.78 35 2.2 70.33 37 6.48 Yes 24 0.94 Yes 0 0 No -36 0.92 Yes 34 88.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52673616 - NM_000259 MYO5A 1 0.38 0.31 18 10.31 76.38 30 5.74 Yes 1 1.93 Yes 0 0 No -30 0.48 No 41 56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 52673902 - NM_000259 MYO5A 1 0.2 0.21 12 7.99 86.5 24 4.27 No 21 0.71 No 0 0 No -23 0.82 Yes 47 81.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 52674975 - NM_000259 MYO5A 1 2.97 2.31 63 4.48 71.88 35 8.56 Yes 22 0.13 No 0 0 No -39 0.53 No 31 78.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 52675381 - NM_000259 MYO5A 1 0.11 0.13 7 2.6 0 34 6.86 Yes 46 1.41 Yes 0 0 No -33 0.88 Yes 37 93.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52700334 - NM_000259 MYO5A 1 0.63 0.54 29 -0.51 0 30 5.2 No 17 0.55 No 0 0 No -30 0.66 No 40 83.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 52703474 - NM_000259 MYO5A 1 0.14 0.18 12 7.77 93.01 34 4.48 No 9 1.6 Yes 0 0 No -21 0.81 Yes 49 76.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52707400 - NM_000259 MYO5A 1 0.31 0.43 25 5.78 78.76 49 7.14 Yes 29 0.09 No 0 0 No -25 0.7 Yes 37 64.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 52730518 - NM_000259 MYO5A 1 0.38 0.14 9 11.35 83.83 63 5.51 No 8 1.41 Yes 0 0 No -20 0.94 Yes 50 96.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52752545 - NM_000259 MYO5A 1 0.33 0.11 7 1.5 80.92 24 5.06 No 74 0.79 Yes 0 0 No -23 0.91 Yes 47 94.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52755040 - NM_000259 MYO5A 1 0.42 0.13 8 6.62 83.77 23 5.53 No 10 1.66 Yes 0 0 No -25 0.7 Yes 45 73.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52781757 - NM_000259 MYO5A 1 0.4 0.14 10 10.09 88.27 32 5.74 Yes 22 0.75 No 0 0 No -30 0.85 Yes 40 91.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 52816400 - NM_000259 MYO5A 1 1.24 0.39 21 7.4 80.83 45 5.94 Yes 32 0.92 Yes 0 0 No -32 0.75 Yes 26 54.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 52819212 - NM_000259 MYO5A 1 0.91 0.29 14 9.45 85.27 42 9.34 Yes 39 0.41 No 0 0 No -37 0.47 No 33 52.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 76487169 + NM_004999 MYO6 1 1.54 1.86 53 9.46 92.91 52 8.01 Yes 39 1.55 Yes 0 0 No -51 0.82 Yes 19 76.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 76509879 + NM_004999 MYO6 1 0.32 0.33 23 6.37 80.4 31 6.85 Yes 18 0.57 No 0 0 No -30 0.42 No 37 69.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 76523315 + NM_004999 MYO6 1 0.58 0.68 32 9.95 90.06 28 6.63 Yes 15 1.59 Yes 0 0 No -27 0.97 Yes 43 92.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 76540160 + NM_004999 MYO6 1 0.14 0.36 19 4.16 83.03 16 5.87 Yes 52 0.7 No 0 0 No -30 0.82 Yes 40 80.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 76551028 + NM_004999 MYO6 1 0.48 0.75 31 8.69 86.17 17 5.12 No 60 0.3 No 0 0 No -25 0.36 No 54 34.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 76580365 + NM_004999 MYO6 1 0.13 0.25 15 -14.75 0 21 7.81 Yes 8 1.12 Yes 0 0 No -28 0.39 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 76588053 + NM_004999 MYO6 1 0.07 0.11 7 7.99 80.98 42 6.39 Yes 42 0.7 No 0 0 No -34 0.75 Yes 36 71.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 76599791 + NM_004999 MYO6 1 0.24 0.64 35 2.66 76.47 22 5.16 No 34 0.19 No 0 0 No -46 0.53 No 24 50.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 76600088 + NM_004999 MYO6 1 0.09 0.18 8 8.53 93.24 34 6.02 Yes 21 0.94 Yes 0 0 No -36 0.47 No 37 57.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 72119381 - NM_006901 MYO9A 1 1.18 0.4 21 -5.14 0 32 6.76 Yes 45 0.31 No 27 0.8 Yes -31 0.92 Yes 39 91.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 72119619 - NM_006901 MYO9A 1 3.32 1.08 46 4.14 0 17 4.53 No -2 0.5 No 0 0 No -21 0.45 No 50 25.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 72139810 - NM_006901 MYO9A 1 17.65 4.49 68 7.35 85.75 38 8.06 Yes 25 2.6 Yes 37 0.9 Yes -37 0.92 Yes 33 94.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 72185519 - NM_006901 MYO9A 1 81.39 9.99 71 4.77 80.58 41 6.03 Yes 70 1.69 Yes 26 0.81 Yes -37 0.54 No 33 50.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 72185522 - NM_006901 MYO9A 1 8.74 1.08 46 0.72 67.37 38 5.88 Yes 67 1.69 Yes 26 0.81 Yes -34 0.57 No 32 55.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 72213741 - NM_006901 MYO9A 1 0.6 0.22 14 5.15 94.32 24 4.88 No 6 0.44 No 0 0 No -23 0.61 No 47 68.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 72230888 - NM_006901 MYO9A 1 0.77 0.26 15 5.98 67.63 40 5.86 Yes 27 1.26 Yes 0 0 No -39 0.64 No 31 84.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 72302792 - NM_006901 MYO9A 1 0.35 0.11 8 -1.2 69.69 33 6.87 Yes 48 0.47 No 29 0.6 Yes -26 0.34 No 38 46.21 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 72302792 - NM_006901 MYO9A 1 0.62 0.19 10 -1.2 69.69 33 6.87 Yes 48 0.47 No 29 0.6 Yes -26 0.34 No 38 46.21 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 17209218 + NM_001130065 MYO9B 1 0.43 0.15 9 12.8 86.69 22 6.86 Yes 9 2.07 Yes 0 0 No -21 0.59 No 49 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 17214066 + NM_001130065 MYO9B 1 2.92 5.4 69 8.51 92.73 19 5.92 Yes 6 1.35 Yes 18 0.76 Yes -28 0.68 Yes 42 53.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 17225214 + NM_001130065 MYO9B 1 0.07 0.14 9 5.95 79.82 41 6.93 Yes 12 1.8 Yes 0 0 No -24 0.88 Yes 46 89.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17253329 + NM_001130065 MYO9B 1 0.08 0.14 10 6.97 68.64 58 6.49 Yes 17 0.85 Yes 0 0 No -57 0.44 No 30 48.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17264815 + NM_001130065 MYO9B 1 0.31 0.64 31 1.92 71.87 48 6.93 Yes 35 0.48 No 0 0 No -34 0.56 No 39 64.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 17277820 + NM_001130065 MYO9B 1 0.11 0.17 10 7.13 83.88 23 7.54 Yes 10 0.24 No 0 0 No -22 0.91 Yes 48 73.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 17288605 + NM_001130065 MYO9B 1 0.84 1.25 43 7.06 87.95 21 4.8 No 14 -1.45 No 20 0.77 Yes -20 0.92 Yes 50 90.46 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17311069 + NM_001130065 MYO9B 1 0.58 1.07 41 8.51 91.62 20 6.15 Yes 7 1.69 Yes 28 0.78 Yes -19 0.93 Yes 51 96.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17313653 + NM_001130065 MYO9B 1 68.6 59.67 72 6.46 80.85 28 7.07 Yes 64 -2.37 No 25 0.77 Yes -27 0.84 Yes 43 83.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17316608 + NM_001130065 MYO9B 1 0.27 0.39 18 6.66 86.01 23 4.39 No -2 0.37 No 0 0 No -24 0.77 Yes 48 65.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 17316811 + NM_001130065 MYO9B 1 0.06 0.1 7 5.47 62.14 28 5.83 Yes 53 1.81 Yes 0 0 No -27 0.87 Yes 43 78.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17317104 + NM_001130065 MYO9B 1 0.28 0.49 24 4.51 78.84 35 5.83 Yes 63 1.6 Yes 0 0 No -27 0.63 No 43 54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 17317910 + NM_001130065 MYO9B 1 0.08 0.15 9 2.99 77.12 9 4.45 No -4 1.23 Yes 19 0.94 Yes -20 0.32 No 51 68.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 46395538 - NM_001012643 MYPOP 1 2.76 0.5 31 11.02 89.27 24 5.48 No -2 0.49 No 0 0 No -23 0.53 No 49 65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46398891 - NM_001012643 MYPOP 1 1.15 0.22 14 6.15 71.19 33 6.16 Yes 52 0.93 Yes 0 0 No -32 0.42 No 38 67.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 59126897 - NM_001085487 MYSM1 1 5.65 3.81 69 3.8 84.24 34 6.02 Yes 21 0.79 Yes 0 0 No -33 0.89 Yes 37 94.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 59129195 - NM_001085487 MYSM1 1 1.33 0.86 42 9.3 80.01 28 5.36 No 50 0.95 Yes 0 0 No -27 0.63 No 43 73.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 59129858 - NM_001085487 MYSM1 1 0.19 0.14 8 7.47 84.26 71 9.46 Yes 10 1.18 Yes 0 0 No -22 0.75 Yes 48 66.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 59134239 - NM_001085487 MYSM1 1 7.38 2.89 64 8.83 99.29 30 6.76 Yes 17 1.35 Yes 29 0.9 Yes -29 0.67 Yes 41 77.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 59137095 - NM_001085487 MYSM1 1 0.17 0.11 8 12.62 87.14 34 6.54 Yes 21 0.64 No 0 0 No -33 0.56 No 37 54.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 59141248 - NM_001085487 MYSM1 1 0.54 0.42 25 -2.8 0 39 6.56 Yes 26 0.19 No 0 0 No -38 0.6 No 32 73.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 59145692 - NM_001085487 MYSM1 1 0.48 0.31 18 3.01 0 37 7.14 Yes 24 1.35 Yes 0 0 No -36 0.92 Yes 34 96.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 59155040 - NM_001085487 MYSM1 1 11.01 4.03 69 9.96 77.05 22 7.1 Yes 9 1.43 Yes 0 0 No -21 0.53 No 43 64.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 59158660 - NM_001085487 MYSM1 1 0.36 0.26 16 5.17 76.96 27 6.83 Yes 36 1.51 Yes 0 0 No -26 0.27 No 44 36.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 59165345 - NM_001085487 MYSM1 1 0.9 0.19 9 12.1 91.74 37 5.99 Yes 28 0.33 No 0 0 No -36 0.64 No 34 80.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 138723602 - NM_016459 MZB1 1 0.01 0.15 8 -0.04 0 12 4.24 No 20 -1.55 No 0 0 No -32 0.86 Yes 38 81.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 138724209 - NM_016459 MZB1 1 0.03 0.18 10 -12.52 44.41 30 5.73 Yes 17 -2.02 No 0 0 No -29 0.64 No 41 51.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 138724254 - NM_016459 MZB1 1 0.03 0.17 12 -0.71 59.49 14 4.85 No 58 1.16 Yes 0 0 No -42 0.53 No 31 30.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 138724291 - NM_016459 MZB1 1 1.62 10.57 71 3.28 78.49 17 4.8 No 21 0.96 Yes 29 0.81 Yes -16 0.62 No 54 59 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 138724312 - NM_016459 MZB1 1 0.02 0.13 9 -5.88 0 13 3.87 No 0 1.1 Yes 29 0.81 Yes -12 0.54 No 58 30.92 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 138724357 - NM_016459 MZB1 1 1.23 8.14 71 8.18 91.74 33 7.15 Yes 37 1.04 Yes 32 0.93 Yes -32 0.86 Yes 38 88.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 138725110 - NM_016459 MZB1 1 4.29 27.28 72 9.19 94.81 19 5 No 16 1.48 Yes 28 0.68 Yes -28 0.57 No 42 60.89 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 138725126 - NM_016459 MZB1 1 1.02 6.63 71 6.32 77.23 13 4.99 No 0 1.47 Yes 28 0.68 Yes -16 0.49 No 54 58.69 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 59073736 - NM_003422 MZF1 1 1.48 0.11 8 4.46 80.62 24 5.48 No 50 -1.99 No 0 0 No -23 0.76 Yes 47 63.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 59079160 - NM_003422 MZF1 1 2.81 0.14 9 8.74 78.66 13 5.57 Yes 29 1.39 Yes 0 0 No -24 0.67 Yes 46 68.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 59080763 - NM_003422 MZF1 1 1.19 0.18 13 -1.71 71.95 19 5.39 No 6 0.15 No 0 0 No -22 0.71 Yes 48 52.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 59080783 - NM_003422 MZF1 1 14.47 2.19 60 -20.9 0 12 3.87 No 30 -0.66 No 23 0.73 Yes -25 0.33 No 26 39.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 59080967 - NM_003422 MZF1 1 0.84 0.18 8 1.06 72.64 22 4.89 No 33 -2.43 No 20 0.95 Yes -21 0.95 Yes 49 87.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 73285220 - NM_001071775 MZT1 1 1.42 2.68 62 12.96 91.61 23 5.39 No 10 0.92 Yes 0 0 No -22 0.79 Yes 48 90.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 132249546 - NM_001085365 MZT2A 1 1.06 1.63 56 10.36 84.52 28 5.5 No 66 1.57 Yes 27 0.94 Yes -27 0.66 No 43 75.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 48587534 - NM_153029 N4BP1 1 0.12 0.14 8 2.87 74 38 6.32 Yes 70 0.72 No 0 0 No -37 0.93 Yes 33 88.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 48589116 - NM_153029 N4BP1 1 0.17 0.19 12 4.78 80.55 48 6.98 Yes 48 1.47 Yes 0 0 No -33 0.43 No 23 58.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 48604204 - NM_153029 N4BP1 1 1.17 0.61 30 6.71 82.35 30 4.94 No 1 0.79 Yes 0 0 No -29 0.85 Yes 41 93.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 40081990 + NM_001318359 N4BP2 1 15.73 2.76 59 4.71 88.76 17 8.49 Yes 4 0.28 No 0 0 No -29 0.46 No 41 43.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 40093248 + NM_001318359 N4BP2 1 1.85 0.32 20 2.3 84.41 44 5.04 No 42 0.72 No 0 0 No -33 0.38 No 40 52.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 40093252 + NM_001318359 N4BP2 1 1.5 0.28 17 4.19 0 48 5.26 No 46 0.71 No 0 0 No -37 0.4 No 36 54.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 40097150 + NM_001318359 N4BP2 1 15.43 2.96 58 5.83 71.15 91 6.37 Yes 60 0.97 Yes 0 0 No -26 0.56 No 43 50.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 40100211 + NM_001318359 N4BP2 1 97.69 3.35 66 5.53 79.45 20 6 Yes 76 0.68 No 0 0 No -19 0.66 No 51 66.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 40106968 + NM_001318359 N4BP2 1 0.75 0.29 17 9.23 94.37 28 6.16 Yes 15 0.06 No 0 0 No -25 0.71 Yes 45 62.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 40112936 + NM_001318359 N4BP2 1 1.72 0.78 38 9.16 84.97 26 5.57 Yes 13 0.64 No 0 0 No -25 0.88 Yes 45 91.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 40119559 + NM_001318359 N4BP2 1 0.28 0.13 7 8.19 84.04 19 4.82 No 61 -3.81 No 0 0 No -24 0.54 No 49 62.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 40124758 + NM_001318359 N4BP2 1 0.43 0.18 11 1.78 0 18 4.57 No 37 0.93 Yes 0 0 No -41 0.25 No 29 54.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 40144343 + NM_001318359 N4BP2 1 13.4 6.22 72 7.49 88.97 15 5 No 2 0.49 No 22 0.57 Yes -22 0.73 Yes 48 81.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 32977899 - NM_052818 N4BP2L1 1 0.49 0.15 10 3.97 77.94 26 5.61 Yes 13 0.29 No 25 0.88 Yes -25 0.68 Yes 45 67.48 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr13 32978409 - NM_052818 N4BP2L1 1 16.93 5.81 72 9.7 91.35 24 6.09 Yes 11 0.34 No 23 0.91 Yes -23 0.97 Yes 47 95.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 32990841 - NM_052818 N4BP2L1 1 4.44 1 39 8.02 76.46 32 5.89 Yes 19 0.98 Yes 0 0 No -35 0.85 Yes 35 93.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32994714 - NM_052818 N4BP2L1 1 1.83 0.46 26 9.15 93.75 18 5.59 Yes 5 0.58 No 0 0 No -28 0.4 No 42 47.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 33000093 - NM_052818 N4BP2L1 1 22.99 5.14 71 12.59 86.28 24 5.27 No 11 0.14 No 23 0.72 Yes -21 0.78 Yes 47 63.58 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr13 33097220 - NM_014887 N4BP2L2 1 0.45 0.46 28 4.95 80.65 22 3.99 No 75 1.16 Yes 0 0 No -21 0.81 Yes 49 92.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 33100726 - NM_014887 N4BP2L2 1 0.31 0.35 21 4.93 69.03 36 5.91 Yes 23 0.03 No 0 0 No -35 0.48 No 35 42.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 177547197 + NM_015111 N4BP3 1 1.04 0.35 18 7.71 81.56 18 5.19 No 40 1.77 Yes 0 0 No -52 0.95 Yes 18 94.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30248811 - NR_047510 N6AMT1 1 0.63 0.21 12 0.63 82.86 34 9.79 Yes 21 0.86 Yes 0 0 No -34 0.5 No 36 79.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 153195329 - NM_001256120 NAA10 1 0.07 0.25 14 5.69 91.66 20 4.9 No 57 0.37 No 0 0 No -19 0.83 Yes 51 64.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153195672 - NM_001256120 NAA10 1 0.03 0.11 7 -9.53 0 53 7.68 Yes 40 0.04 No 0 0 No -52 0.93 Yes 18 96.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153196300 - NM_001256120 NAA10 1 0.11 0.39 22 -3.25 0 17 6.71 Yes 4 2.31 Yes 0 0 No -31 0.59 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153196300 - NM_001256120 NAA10 1 3.24 10.51 72 -3.25 0 17 6.71 Yes 4 2.31 Yes 0 0 No -31 0.59 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153197435 - NM_001256120 NAA10 1 0.05 0.15 9 5.05 0 14 4.47 No 1 0.82 Yes 23 0.77 Yes -23 0.5 No 47 57.71 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 153197595 - NM_001256120 NAA10 1 0.18 0.67 34 4.28 72.45 42 6.4 Yes NA NA NA 0 0 No -25 0.67 Yes 37 74.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153199925 - NM_001256120 NAA10 1 0.27 0.56 27 1.81 0 35 6.4 Yes 22 1.35 Yes 0 0 No -34 0.8 Yes 36 83.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 140277642 + NM_057175 NAA15 1 0.22 0.81 36 5.11 82.36 65 7.29 Yes 7 0.9 Yes 28 0.82 Yes -28 0.75 Yes 42 87.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 140282988 + NM_057175 NAA15 1 0.1 0.31 15 -1.04 76.64 20 4.8 No 62 -4.55 No 0 0 No -24 0.62 No 46 56.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 140283006 + NM_057175 NAA15 1 0.08 0.32 20 3.76 85.73 23 5.19 No 66 -4.11 No 0 0 No -23 0.5 No 47 54.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 140305988 + NM_057175 NAA15 1 12.18 23.38 72 3.65 78.76 28 5.82 Yes 15 0.94 Yes 24 0.81 Yes -27 0.73 Yes 43 81.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 140309170 + NM_057175 NAA15 1 0.14 0.51 26 -0.34 67.83 49 5.39 No 21 0.99 Yes 0 0 No -48 0.69 Yes 22 79.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 41892943 + NM_024561 NAA16 1 0.61 0.1 7 -2.98 79.79 18 3.92 No 33 0.55 No 0 0 No -28 0.42 No 45 46.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 41905910 + NM_024561 NAA16 1 0.73 0.25 14 7.72 84.91 25 6 Yes 62 -5.6 No 0 0 No -24 0.84 Yes 46 89.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 41915546 + NM_024561 NAA16 1 4.64 1.26 50 4.32 78.81 26 7.85 Yes 13 0.72 No 0 0 No -23 0.63 No 47 61.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 41936866 + NM_024561 NAA16 1 43.56 8.25 72 5 75.87 62 7.38 Yes 23 0.7 No 35 0.69 Yes -35 0.79 Yes 35 82.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 41947796 + NM_024561 NAA16 1 0.54 0.13 7 0.23 0 19 4.41 No -3 0.17 No 18 0.93 Yes -18 0.9 Yes 52 91.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 41947903 + NM_024561 NAA16 1 3.57 0.89 41 4.6 84.26 18 6.14 Yes 5 1.36 Yes 24 0.89 Yes -24 0.69 Yes 46 46.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr13 41947928 + NM_024561 NAA16 1 1.28 0.35 22 4.44 0 15 4.39 No 30 1.35 Yes 0 0 No -20 0.35 No 43 67.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 20004065 + NM_181527 NAA20 1 0.11 0.33 19 4.49 71.25 47 6.97 Yes 34 1.58 Yes 0 0 No -24 0.71 Yes 39 80.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 20006285 + NM_181527 NAA20 1 0.05 0.15 11 -8.41 0 19 4.12 No 49 0.74 No 31 0.81 Yes -19 0.64 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 20006312 + NM_181527 NAA20 1 0.06 0.17 11 9.06 82.67 46 5.19 No 33 0.76 No 31 0.81 Yes -45 0.45 No 39 47.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 20013155 + NM_181527 NAA20 1 0.16 0.42 25 -1.38 0 35 7.64 Yes 22 2.1 Yes 0 0 No -34 0.81 Yes 36 95.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 20013747 + NM_181527 NAA20 1 0.14 0.31 18 -14.84 0 21 7.65 Yes 8 0.76 No 0 0 No -26 0.71 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 112468008 - NM_024953 NAA25 1 0.32 0.19 13 3.87 0 36 7.41 Yes 23 1.78 Yes 0 0 No -35 0.79 Yes 35 85.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112481480 - NM_024953 NAA25 1 0.48 0.29 17 7.44 83.08 27 7.55 Yes 14 0.94 Yes 0 0 No -26 0.9 Yes 44 87.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112487416 - NM_024953 NAA25 1 11.2 7.03 71 9.03 92.19 45 6.92 Yes 32 1.35 Yes 35 0.68 Yes -35 0.66 No 26 67.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 112487416 - NM_024953 NAA25 1 0.16 0.1 7 9.03 92.19 45 6.92 Yes 32 1.35 Yes 35 0.68 Yes -35 0.66 No 26 67.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 112491430 - NM_024953 NAA25 1 0.11 0.11 7 6.2 76.73 39 6.4 Yes 57 1.22 Yes 0 0 No -38 0.55 No 48 66.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112500857 - NM_024953 NAA25 1 0.82 0.5 16 3.61 0 36 8.63 Yes 31 0.85 Yes 0 0 No -35 0.66 No 35 79.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112505006 - NM_024953 NAA25 1 0.38 0.28 18 2.95 83.78 33 7.48 Yes 20 1.34 Yes 0 0 No -32 0.82 Yes 38 78.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112512510 - NM_024953 NAA25 1 0.41 0.28 17 1.09 67.67 35 7.07 Yes 22 1.73 Yes 0 0 No -34 0.63 No 36 68.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112512564 - NM_024953 NAA25 1 0.19 0.14 9 1.02 0 37 7.29 Yes 72 -5.42 No 0 0 No -36 0.47 No 34 78.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 112513592 - NM_024953 NAA25 1 0.31 0.25 14 -0.42 82.94 30 4.43 No 4 0.86 Yes 0 0 No -29 0.64 No 41 73.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112516346 - NM_024953 NAA25 1 1.81 1.39 53 8.06 92.03 28 7.08 Yes 62 1.05 Yes 0 0 No -28 0.48 No 48 63.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112521860 - NM_024953 NAA25 1 0.13 0.11 7 5.04 92.32 35 6.1 Yes 63 0.92 Yes 0 0 No -22 0.7 Yes 48 66.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 112521863 - NM_024953 NAA25 1 0.17 0.13 7 5.21 81.19 32 5.94 Yes 60 0.91 Yes 0 0 No -31 0.62 No 39 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 112535243 - NM_024953 NAA25 1 1 0.4 25 3.25 80.12 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.85 Yes 50 88.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112535246 - NM_024953 NAA25 1 0.63 0.28 14 5.2 85.02 18 7 Yes 5 1.23 Yes 28 0.2 Yes -17 0.53 No 53 79.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 112545793 - NM_024953 NAA25 1 0.54 0.22 12 10.87 90.44 27 4.59 No 54 -1.75 No 0 0 No -25 0.94 Yes 45 94.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 57860515 + NM_001011713 NAA30 1 0.42 0.29 15 8.36 86.31 24 5.8 Yes 68 1.11 Yes 0 0 No -23 0.81 Yes 47 86.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 57870750 + NM_001011713 NAA30 1 0.25 0.22 16 9.72 87.64 49 7.34 Yes 44 0.77 No 0 0 No -48 0.92 Yes 22 93.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 88581510 + NM_001321882 NAA35 1 2.07 1.61 54 6.73 84.62 52 7.76 Yes 7 1.53 Yes 24 0.8 Yes -51 0.72 Yes 19 80.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 88592398 + NM_001321882 NAA35 1 0.31 0.24 15 6.54 81.87 20 6.23 Yes 76 0.24 No 0 0 No -25 0.63 No 45 44.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 88593139 + NM_001321882 NAA35 1 2.98 2.4 60 7.2 85.01 16 5.35 No 3 0.39 No 28 0.71 Yes -33 0.84 Yes 37 86.3 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 88635811 + NM_001321882 NAA35 1 0.17 0.13 8 -1.3 0 18 4.12 No 27 0.25 No 0 0 No -32 0.91 Yes 38 88.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 63713494 + NM_001300800 NAA40 1 0.75 0.32 17 6.25 74.99 28 5.88 Yes 72 1.15 Yes 0 0 No -33 0.43 No 47 46.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 63714196 + NM_001300800 NAA40 1 2.35 1.01 41 10.61 91.37 26 5.38 No 13 1.2 Yes 25 0.97 Yes -25 0.94 Yes 45 97.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 113441062 - NM_025146 NAA50 1 0.03 0.13 9 7.49 88.33 33 5.4 No 64 0.69 No 0 0 No -32 0.83 Yes 38 78.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 113442365 - NM_025146 NAA50 1 0.06 0.18 12 6.91 78.8 13 5.71 Yes 63 0.63 No 26 0.61 Yes -54 0.71 Yes 16 72.96 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 113442940 - NM_025146 NAA50 1 41.4 81.82 72 3.83 76.93 26 5.26 No 27 0.76 No 26 0.77 Yes -29 0.66 No 41 68.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 3517676 + NM_024845 NAA60 1 0.36 0.25 15 8.93 86.51 28 5.29 No 19 1.05 Yes 27 0.76 Yes -27 0.77 Yes 43 66.31 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 3532824 + NM_024845 NAA60 1 0.19 0.25 17 9.32 80.25 28 5.65 Yes 15 0.62 No 27 0.87 Yes -27 0.76 Yes 43 88.68 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 3534690 + NM_024845 NAA60 1 0.22 0.24 12 5.61 87.66 28 5.27 No 38 -1.12 No 27 0.77 Yes -27 0.75 Yes 48 44.9 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 3534761 + NM_024845 NAA60 1 0.32 0.38 20 6.48 83.62 24 5.48 No 11 1.26 Yes 23 0.94 Yes -23 0.83 Yes 47 74.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 3534705 + NM_024845 NAA60 1 0.34 0.39 24 -10.95 0 20 4.68 No 8 -1.37 No 0 0 No -19 0.83 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 76842431 - NM_014435 NAAA 1 0.49 0.22 14 7.52 85.6 19 5.35 No 6 0.73 No 0 0 No -24 0.65 No 46 68.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 76854279 - NM_014435 NAAA 1 0.54 0.21 14 3.01 0 30 5.8 Yes 53 0.94 Yes 0 0 No -29 0.67 Yes 41 66.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 76859561 - NM_014435 NAAA 1 0.8 0.11 7 9.57 92.48 54 5.77 Yes 41 0.95 Yes 0 0 No -26 0.64 No 44 66.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 174953681 - NR_046713 NAALADL2-AS2 1 0.1 0.1 7 2.61 66.14 32 4.46 No 19 1.31 Yes 0 0 No -31 0.64 No 39 74.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 174957402 - NR_046713 NAALADL2-AS2 1 3.09 3.06 51 10.13 85.41 29 5.17 No 42 0.21 No 0 0 No -21 0.81 Yes 49 83.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191534154 + NM_001321314 NAB1 1 0.25 0.35 17 8.53 90.05 25 5.91 Yes 75 1.2 Yes 0 0 No -24 0.51 No 46 74.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 191550201 + NM_001321314 NAB1 1 30.51 2.53 60 5.02 75.81 26 6.24 Yes 13 1.3 Yes 25 0.88 Yes -25 0.76 Yes 45 89.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 191550201 + NM_001321314 NAB1 1 905.95 67.5 72 5.02 75.81 26 6.24 Yes 13 1.3 Yes 25 0.88 Yes -25 0.76 Yes 45 89.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57485013 + NM_005967 NAB2 1 0.87 0.15 10 -0.37 0 15 4.56 No 2 0 No 20 0.51 Yes -32 0.57 No 29 40.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 57485016 + NM_005967 NAB2 1 0.3 0.1 7 3.91 88.92 18 4.87 No -3 -0.29 No 20 0.51 Yes -23 0.62 No 50 50.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 192543163 + NM_001254736 NABP1 1 1.29 0.19 13 12.29 91.79 39 6.71 Yes 26 1.44 Yes 0 0 No -38 0.6 No 32 77.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 192547199 + NM_001254736 NABP1 1 0.58 0.49 24 -6.48 48.97 14 4.89 No 61 0.16 No 21 0.87 Yes -17 0.28 No 61 17.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 192547217 + NM_001254736 NABP1 1 33.4 27.93 72 7.63 86.03 22 5.2 No 9 0.78 Yes 21 0.87 Yes -21 0.76 Yes 49 83.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 192548015 + NM_001254736 NABP1 1 0.23 0.21 13 7.33 87.88 24 5.71 Yes 5 1.06 Yes 23 0.88 Yes -23 0.67 Yes 47 78.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 192548961 + NM_001254736 NABP1 1 0.22 0.26 15 -2.03 0 9 3.87 No 45 0.52 No 0 0 No -26 0.42 No 44 47.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 192549598 + NM_001254736 NABP1 1 0.12 0.15 9 0.04 83.32 28 6.63 Yes 15 1.47 Yes 31 0.89 Yes -27 0.96 Yes 43 96.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 192549602 + NM_001254736 NABP1 1 2.35 3.19 61 2.95 0 32 6.93 Yes 19 1.45 Yes 31 0.89 Yes -31 0.95 Yes 39 96.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56619770 + NM_024068 NABP2 1 0.07 0.15 9 9.66 90.51 22 5.74 Yes 9 1.14 Yes 0 0 No -21 0.79 Yes 49 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56620145 + NM_024068 NABP2 1 0.07 0.14 9 2.28 0 9 3.87 No 8 0.78 Yes 0 0 No -28 0.91 Yes 42 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57106366 - NM_001113202 NACA 1 0.01 0.19 7 3.36 70.64 29 6.04 Yes 16 1.26 Yes 21 0.86 Yes -28 0.88 Yes 42 90.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57107441 - NM_001113202 NACA 1 0.01 0.46 24 5.11 82.54 30 5.71 Yes 36 1.24 Yes 25 0.33 Yes -29 0.42 No 27 40.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57108460 - NM_001113202 NACA 1 0.24 6.65 72 0.36 0 20 4.57 No 20 0.51 No 21 0.71 Yes -19 0.53 No 34 69.67 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 57108488 - NM_001113202 NACA 1 0.12 3.33 68 -14.81 0 13 3.87 No 56 1.29 Yes 27 0.62 Yes -41 0.47 No 57 31.43 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57113381 - NM_001113202 NACA 1 0.07 1.9 63 5.99 77.89 26 5.38 No 13 0.26 No 21 0.94 Yes -25 0.89 Yes 45 94.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57118306 - NM_001113202 NACA 1 0.02 0.4 28 -7.99 0 36 5.53 No 57 -1.92 No 0 0 No -30 0.71 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 57118307 - NM_001113202 NACA 1 0.04 0.86 37 -9.85 0 35 5.45 No 56 -1.92 No 0 0 No -29 0.71 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 57118321 - NM_001113202 NACA 1 0.01 0.15 9 -4.94 0 21 4.36 No 73 0.73 No 28 0.77 Yes -20 0.6 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 57118334 - NM_001113202 NACA 1 3.77 85.68 72 6.73 70.35 22 5.66 Yes 74 1.39 Yes 21 0.6 Yes -21 0.33 No 49 53.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57118357 - NM_001113202 NACA 1 0.04 0.94 39 -2.26 52.5 28 5.65 Yes 51 1.39 Yes 21 0.6 Yes -27 0.45 No 43 32.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 1684494 - NM_001198995 NADK 1 0.13 0.21 13 -2.42 0 9 3.87 No 17 0.65 No 0 0 No -29 0.95 Yes 41 95.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1684521 - NM_001198995 NADK 1 0.33 0.57 26 -3.56 0 19 4.47 No NA NA NA 23 0.95 Yes -14 0.55 No 56 35.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 1685124 - NM_001198995 NADK 1 0.11 0.11 7 6.76 81.29 20 4.8 No 21 -0.5 No 25 0.75 Yes -19 0.67 Yes 53 46.98 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 1688322 - NM_001198995 NADK 1 3.91 5.71 72 9.46 91.33 33 7.28 Yes 20 1.72 Yes 32 0.96 Yes -32 0.95 Yes 38 94.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 36225461 - NM_001287340 NADK2 1 0.39 0.1 7 6.43 88.3 35 7.23 Yes 22 1.08 Yes 0 0 No -25 0.8 Yes 45 70.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71170720 + NM_018161 NADSYN1 1 0.16 0.29 16 7.63 84.65 14 5.29 No 21 0.86 Yes 25 0.82 Yes -21 0.5 No 49 65.7 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 71171086 + NM_018161 NADSYN1 1 1.12 2.28 59 9.09 76.35 30 5.74 Yes 65 -1.78 No 29 0.65 Yes -26 0.52 No 44 67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 71171150 + NM_018161 NADSYN1 1 0.07 0.17 9 5.83 81.45 34 6.17 Yes 21 1.11 Yes 0 0 No -28 0.69 Yes 42 75.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71171767 + NM_018161 NADSYN1 1 1.49 2.76 65 5.78 73.13 27 5.66 Yes 76 0.72 No 26 0.81 Yes -26 0.81 Yes 44 68.83 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 71172499 + NM_018161 NADSYN1 1 0.12 0.26 14 1.8 0 28 6.34 Yes 9 -0.86 No 0 0 No -27 0.56 No 43 68.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71175044 + NM_018161 NADSYN1 1 0.36 0.6 32 0.58 70.5 49 7.64 Yes -1 1.2 Yes 0 0 No -25 0.8 Yes 29 53.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 71175061 + NM_018161 NADSYN1 1 0.08 0.17 12 2.46 83.91 26 5.08 No 16 1.15 Yes 24 0.85 Yes -28 0.59 No 42 39.47 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 71175078 + NM_018161 NADSYN1 1 0.83 1.4 50 0.61 70.86 20 4.8 No 33 1.16 Yes 24 0.85 Yes -19 0.87 Yes 51 35.43 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 71175102 + NM_018161 NADSYN1 1 0.15 0.25 12 -0.94 0 30 5.66 Yes 57 1.16 Yes 0 0 No -28 0.7 Yes 42 84.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71176362 + NM_018161 NADSYN1 1 0.82 1.32 46 7.69 86.06 22 8.02 Yes 9 1.06 Yes 0 0 No -21 0.96 Yes 49 96.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71184892 + NM_018161 NADSYN1 1 3.74 4.56 67 9.76 89.4 27 5.36 No 14 0.44 No 0 0 No -26 0.92 Yes 44 92.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 71186459 + NM_018161 NADSYN1 1 0.2 0.18 13 2.92 73.26 16 5.29 No 70 -2.99 No 0 0 No -31 0.43 No 48 38.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71186540 + NM_018161 NADSYN1 1 1.59 1.47 47 4.21 78.94 30 6 Yes 33 -1.41 No 0 0 No -29 0.87 Yes 41 77.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 71186941 + NM_018161 NADSYN1 1 0.31 0.25 12 3.96 75.63 21 5.66 Yes 8 1.11 Yes 0 0 No -20 0.68 Yes 50 84.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71187078 + NM_018161 NADSYN1 1 0.7 0.71 34 8.04 81.18 37 6.34 Yes 24 0.44 No 27 0.77 Yes -36 0.47 No 34 68.17 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 71187227 + NM_018161 NADSYN1 1 0.57 0.54 26 2.14 66.3 22 5.29 No 64 1.14 Yes 23 0.88 Yes -21 0.84 Yes 49 78.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71187246 + NM_018161 NADSYN1 1 4.72 4.71 68 5.79 76.95 24 5.29 No 28 -0.68 No 23 0.88 Yes -21 0.77 Yes 52 60.13 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 71187313 + NM_018161 NADSYN1 1 0.18 0.18 11 -4.9 58.29 59 8.49 Yes 46 1.95 Yes 0 0 No -58 0.37 No 29 46.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 71187490 + NM_018161 NADSYN1 1 2.51 2.38 59 6.3 85.85 29 6.83 Yes 55 0.95 Yes 0 0 No -28 0.95 Yes 42 96.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71187495 + NM_018161 NADSYN1 1 0.29 0.28 15 1.1 0 34 7.07 Yes 60 0.94 Yes 0 0 No -33 0.94 Yes 37 96.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71187589 + NM_018161 NADSYN1 1 0.13 0.13 7 5.34 85.76 26 5.29 No 25 0.43 No 0 0 No -25 0.77 Yes 45 86.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 71187658 + NM_018161 NADSYN1 1 0.18 0.18 11 4.98 79.01 29 5.47 No 59 -0.51 No 19 0.62 Yes -23 0.69 Yes 47 71.91 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71188390 + NM_018161 NADSYN1 1 4.62 4.24 65 4.22 71.78 51 9.14 Yes 38 1.32 Yes 30 0.87 Yes -28 0.75 Yes 20 69.43 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 71191231 + NM_018161 NADSYN1 1 1.21 1 41 2.98 83.04 40 8.11 Yes 27 2.04 Yes 23 0.9 Yes -39 0.91 Yes 31 91.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71191264 + NM_018161 NADSYN1 1 1.3 1.11 39 5.48 67.92 36 4.18 No 60 2.02 Yes 23 0.9 Yes -23 0.92 Yes 47 66.13 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 71192548 + NM_018161 NADSYN1 1 0.14 0.21 14 10.41 85.86 21 5.53 No 64 0.74 No 0 0 No -20 0.73 Yes 50 72.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 71193046 + NM_018161 NADSYN1 1 0.51 0.68 34 7.57 81.46 22 6.62 Yes 9 1.04 Yes 21 0.88 Yes -21 0.9 Yes 49 84.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71202604 + NM_018161 NADSYN1 1 1 1.4 42 3.26 76.71 24 4.8 No 20 1.28 Yes 0 0 No -21 0.93 Yes 49 57.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 71208511 + NM_018161 NADSYN1 1 0.29 0.25 16 4.35 71.16 23 5.98 Yes 10 1.17 Yes 22 0.59 Yes -22 0.8 Yes 48 77.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71208532 + NM_018161 NADSYN1 1 4.14 3.85 68 -3.48 0 31 5.48 No 31 1.16 Yes 26 0.52 Yes -30 0.68 Yes 40 43.49 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 71209932 + NM_018161 NADSYN1 1 0.64 1.01 44 5.48 79.73 26 5.6 Yes 67 0.78 Yes 0 0 No -25 0.82 Yes 45 87.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71210007 + NM_018161 NADSYN1 1 0.17 0.28 15 4.79 77.3 44 6.16 Yes 36 0.93 Yes 0 0 No -24 0.65 No 46 59.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 71212333 + NM_018161 NADSYN1 1 0.11 0.24 15 5.28 82.67 34 6.16 Yes 58 1.58 Yes 18 0.91 Yes -31 0.57 No 37 68.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 66837021 - NM_001018160 NAE1 1 0.06 0.14 8 0.89 0 33 6.06 Yes 41 0.83 Yes 0 0 No -32 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 66837049 - NM_001018160 NAE1 1 0.26 0.51 22 4.13 77.68 19 4.78 No 13 0.8 Yes 31 0.63 Yes -25 0.86 Yes 45 85.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 66839538 - NM_001018160 NAE1 1 0.11 0.18 12 3.52 84.41 41 4.8 No 28 0.36 No 0 0 No -26 0.81 Yes 44 87.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 66839766 - NM_001018160 NAE1 1 0.12 0.22 15 0.06 66.84 20 5.57 Yes 7 0.22 No 27 0.58 Yes -19 0.44 No 18 38.02 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 66842510 - NM_001018160 NAE1 1 0.08 0.18 10 4.17 0 10 4 No 14 0.98 Yes 0 0 No -31 0.33 No 39 58.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 66857166 - NM_001018160 NAE1 1 0.19 0.32 19 9.16 89.65 20 5.79 Yes 7 1.17 Yes 25 0.5 Yes -25 0.74 Yes 45 71.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 66857527 - NM_001018160 NAE1 1 0.06 0.1 7 2.59 80.15 23 5 No 10 1.18 Yes 30 0.91 Yes -22 0.91 Yes 48 92.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 164057473 - NM_001128931 NAF1 1 0.44 0.42 20 4.69 67.7 41 6.71 Yes 57 0.76 No 40 0.45 Yes -38 0.82 Yes 32 85.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 164063119 - NM_001128931 NAF1 1 0.81 0.39 23 6.91 82.35 31 4.07 No 8 0.86 Yes 0 0 No -30 0.49 No 40 61.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 164078607 - NM_001128931 NAF1 1 1.98 1.97 53 5.4 83.81 21 5.2 No 28 1.01 Yes 20 0.82 Yes -20 0.89 Yes 50 94.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 164079480 - NM_001128931 NAF1 1 4.69 4.24 67 6.1 79.96 31 6.63 Yes 18 1.36 Yes 30 0.82 Yes -30 0.86 Yes 40 92.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 42457004 - NM_000262 NAGA 1 0.36 0.28 17 2.01 0 13 4.36 No 0 0.24 No 0 0 No -20 0.47 No 51 54.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 42457027 - NM_000262 NAGA 1 0.7 0.57 26 4.88 74.65 34 5.91 Yes 21 0.13 No 0 0 No -33 0.86 Yes 37 93.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 42457786 - NM_000262 NAGA 1 0.49 0.31 19 7.86 91.11 23 7.35 Yes 10 1.38 Yes 0 0 No -22 0.91 Yes 48 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42464523 - NM_000262 NAGA 1 0.37 0.24 14 3.85 77.85 25 6.24 Yes 71 0.97 Yes 0 0 No -24 0.8 Yes 46 89.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42465461 - NM_000262 NAGA 1 0.17 0.13 8 6.48 84.2 29 5.85 Yes 16 1.72 Yes 0 0 No -28 0.85 Yes 42 92.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42466073 - NM_000262 NAGA 1 0.65 0.4 18 1.25 0 23 6.82 Yes 10 1.39 Yes 0 0 No -42 0.65 No 28 79.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 42466078 - NM_000262 NAGA 1 0.7 0.46 27 7.15 75.91 18 6.45 Yes 5 1.45 Yes 0 0 No -37 0.74 Yes 33 82.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 71296793 + NM_017567 NAGK 1 0.16 0.17 10 6.62 85.08 16 4.98 No 3 1.26 Yes 0 0 No -23 0.69 Yes 47 74.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 71298842 + NM_017567 NAGK 1 0.05 0.1 7 -2.12 62.58 16 4.69 No 33 0.79 Yes 0 0 No -15 0.48 No 25 42.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 71300592 + NM_017567 NAGK 1 0.55 1.32 49 5.68 74.85 20 5.62 Yes 49 1.39 Yes 21 0.89 Yes -25 0.55 No 45 77.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 71304699 + NM_017567 NAGK 1 0.09 0.13 7 4.63 0 19 4.02 No 53 -0.68 No 26 0.54 Yes -32 0.4 No 38 78.08 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 71304699 + NM_017567 NAGK 1 1.04 1.65 57 4.63 0 19 4.02 No 53 -0.68 No 26 0.54 Yes -32 0.4 No 38 78.08 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 40688834 + NM_000263 NAGLU 1 1.6 0.21 12 7.02 86.62 23 4.99 No 10 0.47 No 0 0 No -22 0.74 Yes 48 65.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 40691034 + NM_000263 NAGLU 1 0.28 0.1 7 5.19 78.36 16 7 Yes 3 1.1 Yes 0 0 No -26 0.76 Yes 44 72.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40693056 + NM_000263 NAGLU 1 5.9 2.21 60 2.81 70 40 7.87 Yes 27 1.62 Yes 0 0 No -39 0.57 No 31 88.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 5075603 - NM_016256 NAGPA 1 4.5 1.22 51 7.65 87.22 24 5.83 Yes 53 1.5 Yes 0 0 No -27 0.88 Yes 43 84.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 5077192 - NM_016256 NAGPA 1 1.16 0.36 18 -7.87 0 13 4.12 No 19 0.47 No 0 0 No -31 0.92 Yes 39 86.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 5077195 - NM_016256 NAGPA 1 0.57 0.15 10 -5.11 0 29 5.92 Yes 16 0.47 No 0 0 No -28 0.93 Yes 42 93.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 5078367 - NM_016256 NAGPA 1 4.38 0.82 39 6.19 81.3 25 6.16 Yes 44 -4.53 No 24 0.92 Yes -24 0.81 Yes 46 83.56 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 5078400 - NM_016256 NAGPA 1 1.24 0.25 14 -1.65 49.2 41 6.55 Yes 44 -2.64 No 29 0.4 Yes -23 0.64 No 47 43.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 105899322 - NM_005746 NAMPT 1 0.2 0.83 35 8.54 80.75 32 6.15 Yes 19 0.87 Yes 0 0 No -26 0.67 Yes 44 77.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105907216 - NM_005746 NAMPT 1 0.03 0.13 8 7.65 84.4 26 5.56 Yes 55 1.77 Yes 0 0 No -25 0.93 Yes 45 95.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105910623 - NM_005746 NAMPT 1 0.02 0.13 8 2.16 67.69 24 4.8 No 72 -6.5 No 0 0 No -20 0.36 No 37 56.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105913102 - NM_005746 NAMPT 1 0.13 0.93 40 -0.6 67.89 31 4.72 No 14 0.22 No 0 0 No -34 0.36 No 36 38.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105915487 - NM_005746 NAMPT 1 0.04 0.19 12 -8.54 0 12 4.24 No 69 -4.58 No 0 0 No -33 0.53 No 37 55.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105915490 - NM_005746 NAMPT 1 0.04 0.21 12 -8.31 0 9 3.87 No 66 -4.58 No 0 0 No -30 0.53 No 40 60.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105915515 - NM_005746 NAMPT 1 0.03 0.13 7 2.33 0 15 4.58 No 75 -6.59 No 24 0.88 Yes -29 0.71 Yes 41 85.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 25597654 - NM_152667 NANP 1 0.74 0.13 9 9.53 83.96 36 6.08 Yes 47 0.23 No 0 0 No -36 0.77 Yes 34 78.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 100826275 + NM_018946 NANS 1 0.31 0.58 33 8.2 86.19 27 6.96 Yes 14 0.42 No 0 0 No -26 0.67 Yes 44 64.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 100826913 + NM_018946 NANS 1 0.04 0.1 7 8.11 90.47 20 5.19 No 62 1.62 Yes 0 0 No -29 0.54 No 41 57.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 100827618 + NM_018946 NANS 1 0.07 0.15 11 8.59 88.56 40 7.07 Yes 27 0.72 No 0 0 No -39 0.83 Yes 31 89.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 100831740 + NM_018946 NANS 1 0.26 0.5 26 8.06 93.53 20 7.14 Yes 7 1.21 Yes 0 0 No -19 0.7 Yes 51 92.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100837851 + NM_018946 NANS 1 0.23 0.4 24 5.63 83.89 25 4.29 No 9 -0.25 No 25 0.48 Yes -24 0.79 Yes 46 88.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 100840575 + NM_018946 NANS 1 0.04 0.11 8 7.88 87.85 34 4.2 No 12 1.29 Yes 24 0.79 Yes -24 0.82 Yes 46 81.28 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 100840047 + NM_018946 NANS 1 0.36 0.93 38 6.09 93.03 16 3.8 No 3 0.7 No 0 0 No -25 0.48 No 42 46.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 100840343 + NM_018946 NANS 1 0.43 1.1 40 12.45 90.59 27 5.45 No 75 -1.12 No 27 0.81 Yes -27 0.34 No 44 62.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 100840575 + NM_018946 NANS 1 0.41 1 41 7.88 87.85 34 4.2 No 12 1.29 Yes 24 0.79 Yes -24 0.82 Yes 46 81.28 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 100843131 + NM_018946 NANS 1 0.24 0.38 20 9.59 76.99 28 4.4 No 0 1.59 Yes 0 0 No -27 0.44 No 43 59.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 76443031 - NM_001307924 NAP1L1 1 10847.63 1675.39 72 5.94 71.19 28 7.5 Yes 72 0.57 No 27 0.84 Yes -27 0.92 Yes 43 94.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 76445767 - NM_001307924 NAP1L1 1 0.02 0.32 18 4.75 86.84 22 5 No 65 -1.4 No 0 0 No -26 0.53 No 18 48.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 76445791 - NM_001307924 NAP1L1 1 0.01 0.14 10 2.03 83.95 34 3.52 No 75 1.03 Yes 0 0 No -23 0.59 No 42 47.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 76446181 - NM_001307924 NAP1L1 1 0.03 0.53 27 8.1 77.71 24 5.47 No 74 0.51 No 0 0 No -23 0.7 Yes 47 61.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 76446890 - NM_001307924 NAP1L1 1 0.01 0.13 8 -13.87 0 30 4.86 No 56 1.25 Yes 0 0 No -29 0.93 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 76446894 - NM_001307924 NAP1L1 1 0.01 0.15 11 -2.13 0 26 4.65 No 52 1.24 Yes 28 0.89 Yes -25 0.92 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 76447688 - NM_001307924 NAP1L1 1 0.04 1.18 48 -3.74 72.01 26 6.25 Yes 13 1.2 Yes 0 0 No -30 0.37 No 41 54.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 76448874 - NM_001307924 NAP1L1 1 0.01 0.31 20 -3.03 0 24 6.95 Yes 11 0.49 No 26 0.86 Yes -23 0.93 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 76449939 - NM_001307924 NAP1L1 1 1.51 44.5 72 -15.04 65.86 43 6.64 Yes 14 0.87 Yes 27 0.62 Yes -30 0.68 Yes 28 69.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 76449939 - NM_001307924 NAP1L1 1 0.01 0.4 23 -15.04 65.86 43 6.64 Yes 14 0.87 Yes 27 0.62 Yes -30 0.68 Yes 28 69.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 76450453 - NM_001307924 NAP1L1 1 0.02 0.63 29 6.48 74.49 36 6.77 Yes 45 0.56 No 35 0.81 Yes -35 0.83 Yes 35 83.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 76451557 - NM_001307924 NAP1L1 1 0.09 2.6 63 8.2 81.7 107 9.92 Yes 55 2.31 Yes 26 0.34 Yes -58 0.53 No 12 61.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 76452691 - NM_001307924 NAP1L1 1 0 0.13 8 8.7 81.73 24 5.26 No 50 -4.4 No 0 0 No -24 0.6 No 47 73.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 76454046 - NM_001307924 NAP1L1 1 0 0.1 7 -1.37 0 24 4.8 No 11 2.17 Yes 0 0 No -37 0.46 No 33 65.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 76454051 - NM_001307924 NAP1L1 1 0.06 2.13 60 1.43 0 19 4.24 No 6 2.19 Yes 0 0 No -32 0.45 No 38 64.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 76454051 - NM_001307924 NAP1L1 1 0 0.13 7 1.43 0 19 4.24 No 6 2.19 Yes 0 0 No -32 0.45 No 38 64.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 76454868 - NM_001307924 NAP1L1 1 0.03 1.17 45 0.57 0 30 5.51 No 17 0.42 No 29 0.86 Yes -29 0.96 Yes 41 98.14 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 76456989 - NM_001307924 NAP1L1 1 0.01 0.21 11 9.91 88.07 99 7.18 Yes 60 0.68 No 0 0 No -40 0.74 Yes 30 79.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 76462765 - NM_001307924 NAP1L1 1 0.36 5.06 72 -11.07 0 20 4.35 No 53 1.34 Yes 0 0 No -27 0.36 No 58 38.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 76462770 - NM_001307924 NAP1L1 1 0.01 0.14 7 -5.19 0 80 7.29 Yes 48 1.33 Yes 0 0 No -22 0.73 Yes 31 42.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 76462772 - NM_001307924 NAP1L1 1 0.04 0.56 34 -7.16 0 78 7.19 Yes 46 1.33 Yes 0 0 No -20 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 76462796 - NM_001307924 NAP1L1 1 0.01 0.1 7 -4.59 0 54 5.96 Yes 22 1.36 Yes 29 0.46 Yes -21 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 2966874 - NM_005969 NAP1L4 1 0.59 0.83 38 0.61 72.54 30 4.94 No 76 0.63 No 0 0 No -27 0.78 Yes 43 77.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 2966874 - NM_005969 NAP1L4 1 2.14 3.11 66 0.61 72.54 30 4.94 No 76 0.63 No 0 0 No -27 0.78 Yes 43 77.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 2974164 - NM_005969 NAP1L4 1 0.31 0.94 43 8.77 79.98 15 5.71 Yes 2 1.57 Yes 0 0 No -30 0.48 No 40 66.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 2975641 - NM_005969 NAP1L4 1 0.14 0.44 24 3.12 77.51 22 6.77 Yes 9 1.52 Yes 21 0.82 Yes -21 0.65 No 49 81.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 2978803 - NM_005969 NAP1L4 1 0.3 1.47 46 5.79 79.28 22 5.89 Yes 9 0.53 No 0 0 No -28 0.68 Yes 42 67.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 2979792 - NM_005969 NAP1L4 1 0.15 0.74 31 7.92 83.81 36 8.51 Yes 10 0.94 Yes 21 0.95 Yes -22 0.8 Yes 35 69.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 2979869 - NM_005969 NAP1L4 1 0.03 0.17 10 9.49 96.43 15 5.66 Yes 42 -1.87 No 0 0 No -25 0.76 Yes 45 82.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 2980162 - NM_005969 NAP1L4 1 0.16 0.83 38 10.01 91.5 36 5.51 No 70 -2.3 No 0 0 No -28 0.55 No 51 71.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 2993425 - NM_005969 NAP1L4 1 0.21 0.96 42 3.63 72.3 21 4.98 No 51 1.13 Yes 0 0 No -20 0.82 Yes 50 76.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 2993473 - NM_005969 NAP1L4 1 0.03 0.13 8 -9.18 0 16 5.63 Yes 75 1.3 Yes 0 0 No -29 0.59 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 2993510 - NM_005969 NAP1L4 1 5.7 25.14 72 10.93 96.41 26 5.39 No 38 1.28 Yes 25 0.71 Yes -25 0.71 Yes 45 51.82 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 2997353 - NM_005969 NAP1L4 1 0.04 0.15 10 -16.35 0 70 9.22 Yes 57 1.16 Yes 0 0 No -28 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 2999565 - NM_005969 NAP1L4 1 0.05 0.22 15 5.6 0 11 4.12 No 24 1.16 Yes 0 0 No -23 0.38 No 47 38.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 2999571 - NM_005969 NAP1L4 1 0.03 0.13 8 -21.35 0 31 6.35 Yes 18 1.18 Yes 0 0 No -30 0.28 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 2999572 - NM_005969 NAP1L4 1 0.06 0.26 16 -12.03 0 30 6.28 Yes 17 1.17 Yes 0 0 No -29 0.33 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 3005044 - NM_005969 NAP1L4 1 0.35 0.56 27 8.6 86.73 28 7.67 Yes 15 1.42 Yes 27 0.91 Yes -27 0.95 Yes 43 95.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 3010428 - NM_005969 NAP1L4 1 3.02 4.65 70 2.07 69.33 40 7.39 Yes 27 1.07 Yes 24 0.76 Yes -39 0.73 Yes 31 76.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 3010502 - NM_005969 NAP1L4 1 4.62 6.96 72 6.36 89.4 27 5.74 Yes 14 0.17 No 26 0.87 Yes -26 0.69 Yes 44 69.21 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 47993017 - NR_038457 NAPA 1 0.09 0.4 25 -11.17 0 28 6.56 Yes 15 2.55 Yes 0 0 No -27 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 47993018 - NR_038457 NAPA 1 0.08 0.35 20 -13.1 0 27 6.48 Yes 14 2.55 Yes 0 0 No -26 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 47995638 - NR_038457 NAPA 1 0.14 0.35 18 8.9 85.19 33 5.74 Yes 20 1.38 Yes 0 0 No -32 0.74 Yes 38 80.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 48004007 - NR_038457 NAPA 1 21.71 0.97 43 11.78 88.27 32 5.74 Yes 19 0.77 No 31 0.79 Yes -31 0.83 Yes 39 79.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48006760 - NR_038457 NAPA 1 7011.21 342.46 72 10.93 90 39 6.48 Yes NA NA NA 33 0.35 Yes -33 0.72 Yes 37 77.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 48008801 - NR_038457 NAPA 1 8.09 0.38 17 7.07 88.09 17 7.36 Yes 73 1.01 Yes 24 0.47 Yes -24 0.54 No 47 58.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 48010232 - NR_038457 NAPA 1 2.16 0.13 7 6.17 88.29 28 7.34 Yes 30 -2 No 27 0.64 Yes -27 0.33 No 43 40.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 48014226 - NR_038457 NAPA 1 1.71 0.14 9 3.6 79.48 40 6.75 Yes 27 0.72 No 0 0 No -32 0.45 No 31 78.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 47998280 + NR_038452 NAPA-AS1 1 3.1 0.46 28 1.21 84.41 26 5.24 No 13 2.09 Yes 29 0.75 Yes -25 0.48 No 45 69.5 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 23375900 - NM_001283018 NAPB 1 24.54 2.1 58 3.65 77.57 74 8.99 Yes 40 1.84 Yes 0 0 No -19 0.41 No 44 36.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 23375900 - NM_001283018 NAPB 1 5.09 0.36 20 3.65 77.57 74 8.99 Yes 40 1.84 Yes 0 0 No -19 0.41 No 44 36.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 23376105 - NM_001283018 NAPB 1 15.98 1.38 52 5.82 84.43 36 7.21 Yes 23 0.5 No 0 0 No -35 0.49 No 35 74.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 23376105 - NM_001283018 NAPB 1 1.42 0.17 12 5.82 84.43 36 7.21 Yes 23 0.5 No 0 0 No -35 0.49 No 35 74.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 102765055 - NM_198990 NAPEPLD 1 0.93 0.17 9 7.56 89.29 32 5.59 Yes 36 -2.43 No 0 0 No -28 0.67 Yes 39 72.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 10528997 + NM_003826 NAPG 1 2.37 1.43 55 0.9 60.8 39 7.28 Yes 26 1.2 Yes 0 0 No -38 0.88 Yes 32 90.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 10538856 + NM_003826 NAPG 1 2.39 2.11 60 6.36 68.32 31 8.93 Yes 49 0.69 No 0 0 No -30 0.93 Yes 40 86.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 10545855 + NM_003826 NAPG 1 0.25 0.24 16 9.93 84.12 29 6.63 Yes 16 2.12 Yes 0 0 No -28 0.89 Yes 42 90.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 10546117 + NM_003826 NAPG 1 0.1 0.11 7 8.02 88.72 24 5.38 No 22 1.92 Yes 0 0 No -23 0.67 Yes 47 72.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 10548927 + NM_003826 NAPG 1 0.12 0.13 7 5.84 86.22 18 4.9 No 5 0.63 No 27 0.76 Yes -21 0.65 No 53 73.6 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 144658336 - NM_145201 NAPRT 1 0.25 0.17 10 -1.54 0 22 5.88 Yes 70 -2.49 No 20 0.61 Yes -21 0.3 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 50837815 - NR_002798 NAPSB 1 1.62 2.07 55 3.92 70.29 23 3.76 No 10 0.71 No 0 0 No -22 0.71 Yes 48 67.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 50838194 - NR_002798 NAPSB 1 0.21 0.31 17 7.27 89.07 16 4.97 No 3 1.94 Yes 0 0 No -22 0.95 Yes 48 92.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80417875 + NM_031968 NARF 1 0.29 0.19 14 -5.69 0 12 2.85 No 17 1.09 Yes 28 0.87 Yes -36 0.71 Yes 34 87.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80426983 + NM_031968 NARF 1 0.13 0.18 11 7.86 83.77 25 6.08 Yes 32 0.71 No 0 0 No -24 0.79 Yes 46 75.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80436446 + NM_031968 NARF 1 0.15 0.19 11 10.22 87.7 22 6.41 Yes 41 1.19 Yes 21 0.74 Yes -21 0.69 Yes 42 68.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 80436446 + NM_031968 NARF 1 4.88 5.82 72 10.22 87.7 22 6.41 Yes 41 1.19 Yes 21 0.74 Yes -21 0.69 Yes 42 68.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 80437813 + NM_031968 NARF 1 1.97 1.76 51 3.47 81.08 22 4.8 No 48 0.12 No 21 0.85 Yes -21 0.85 Yes 49 81.04 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80438282 + NM_031968 NARF 1 0.22 0.19 10 8.09 79.79 26 7.66 Yes 13 0.93 Yes 25 0.94 Yes -25 0.91 Yes 45 87.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 787696 - NM_001304799 NARFL 1 0.63 0.28 17 12.14 86.95 25 5.57 Yes 12 1.22 Yes 24 0.93 Yes -24 0.92 Yes 46 96.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 55269014 - NM_004539 NARS 1 0.13 0.4 25 -6.25 76.1 47 4.73 No 34 1.11 Yes 0 0 No -34 0.93 Yes 36 93.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 55287881 - NM_004539 NARS 1 22.13 41.6 72 1.78 73.72 28 4.99 No 15 1.22 Yes 20 0.89 Yes -23 0.7 Yes 47 66.46 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 78165092 - NM_024678 NARS2 1 0.45 0.29 17 4.27 66.13 31 6.99 Yes 18 1.63 Yes 0 0 No -35 0.71 Yes 35 69.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 78168453 - NM_024678 NARS2 1 0.35 0.28 13 5.77 88.33 21 4.24 No 8 1 Yes 0 0 No -20 0.71 Yes 50 79.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 78178581 - NM_024678 NARS2 1 0.12 0.14 7 2.56 82.57 37 7.04 Yes 24 0.81 Yes 0 0 No -28 0.31 No 42 36.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 78189517 - NM_024678 NARS2 1 2.79 1.76 57 1.57 0 48 8.08 Yes 21 0.34 No 0 0 No -40 0.54 No 30 80.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 78189535 - NM_024678 NARS2 1 0.38 0.25 13 0.02 0 30 7.69 Yes 3 0.25 No 29 0.65 Yes -22 0.61 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 78273074 - NM_024678 NARS2 1 0.56 0.4 20 8.82 93.17 53 7.93 Yes 40 2.19 Yes 0 0 No -42 0.93 Yes 28 89.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 78278596 - NM_024678 NARS2 1 0.22 0.18 11 10.76 86.87 27 6.31 Yes 14 2.32 Yes 0 0 No -26 0.86 Yes 44 85.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 78278794 - NM_024678 NARS2 1 0.19 0.1 7 7.59 85.25 22 5.8 Yes 9 0.69 No 0 0 No -30 0.57 No 49 54.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 78284574 - NM_024678 NARS2 1 0.65 0.24 14 3.01 0 27 6.33 Yes 14 1.54 Yes 0 0 No -26 0.75 Yes 44 78.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46054322 + NM_002482 NASP 1 0.13 0.39 22 7.96 82.78 27 5.29 No 55 1.64 Yes 26 0.86 Yes -26 0.85 Yes 44 87.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46060365 + NM_002482 NASP 1 0.61 1.47 55 8.8 87.64 22 7.28 Yes 9 1.28 Yes 21 0.79 Yes -21 0.92 Yes 49 93.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46066056 + NM_002482 NASP 1 3.29 8.36 71 7.31 83.2 50 5.56 Yes 18 1.38 Yes 30 0.88 Yes -30 0.94 Yes 40 96.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46070588 + NM_002482 NASP 1 0.05 0.21 14 -1.39 0 14 4 No 22 0.81 Yes 26 0.61 Yes -13 0.74 Yes 57 78.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46082366 + NM_002482 NASP 1 0.02 0.17 9 -23.88 0 18 6.71 Yes 5 1.34 Yes 27 0.89 Yes -21 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 46071468 + NM_002482 NASP 1 0.06 0.22 13 7.93 85.05 28 5.52 No 15 1.18 Yes 0 0 No -27 0.95 Yes 43 93.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46077728 + NM_002482 NASP 1 4.47 0.19 13 7.34 85.4 31 8.6 Yes 18 1.58 Yes 0 0 No -30 0.93 Yes 40 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46078849 + NM_002482 NASP 1 2.24 0.14 8 -6.13 0 18 4.24 No 15 0.25 No 0 0 No -27 0.53 No 43 74.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 46082282 + NM_002482 NASP 1 0.02 0.13 9 2.26 66.49 27 5.39 No 66 0.25 No 20 0.97 Yes -26 0.94 Yes 44 89.74 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46083113 + NM_002482 NASP 1 0.06 0.44 23 -3.02 64.04 16 4.66 No 13 -3.08 No 24 0.77 Yes -37 0.49 No 33 33.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 46083714 + NM_002482 NASP 1 0.18 0.6 26 3.3 82.39 13 3.4 No 0 1.41 Yes 26 0.91 Yes -23 0.69 Yes 47 82.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 34128599 + NM_024662 NAT10 1 0.7 1.11 39 3.97 84.41 32 5.1 No 70 1.41 Yes 28 0.83 Yes -28 0.84 Yes 42 82.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 34129787 + NM_024662 NAT10 1 0.82 1.28 47 1.44 60.2 29 6.16 Yes 72 1.44 Yes 0 0 No -29 0.6 No 42 52.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 34149011 + NM_024662 NAT10 1 0.04 0.1 7 -24.92 0 29 6.26 Yes 8 0.83 Yes 0 0 No -28 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 34155867 + NM_024662 NAT10 1 0.08 0.14 8 -20.54 0 45 7 Yes 32 -0.67 No 0 0 No -28 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 34160716 + NM_024662 NAT10 1 0.07 0.18 11 2.38 78.37 26 5.1 No 60 1.43 Yes 23 0.48 Yes -25 0.83 Yes 45 76.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 34161151 + NM_024662 NAT10 1 0.09 0.18 13 -1.7 61.02 16 4.69 No 3 -1.18 No 0 0 No -15 0.63 No 55 57.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 34162662 + NM_024662 NAT10 1 0.31 0.38 20 4.08 74.83 30 5.91 Yes 68 -3.24 No 0 0 No -29 0.86 Yes 41 84.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 34163796 + NM_024662 NAT10 1 0.05 0.15 9 2.8 65.17 42 7.34 Yes 29 1.14 Yes 31 0.9 Yes -41 0.91 Yes 29 77.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 34163807 + NM_024662 NAT10 1 0.15 0.44 27 -1.19 0 18 4.47 No 5 1.87 Yes 31 0.9 Yes -17 0.76 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 55998420 + NM_020378 NAT14 1 2.34 0.6 28 8.76 81.68 43 6.47 Yes 33 0.94 Yes 0 0 No -42 0.44 No 35 58.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 72767974 - NM_001305078 NAT9 1 3.19 2.75 65 -0.27 0 19 4.12 No 46 0.87 Yes 30 0.73 Yes -54 0.75 Yes 16 60.56 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 72767984 - NM_001305078 NAT9 1 0.15 0.14 10 -3.8 65.4 21 4.8 No 36 0.87 Yes 30 0.73 Yes -44 0.76 Yes 26 91.66 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 72768023 - NM_001305078 NAT9 1 0.36 0.32 20 2.03 82.44 18 7.27 Yes -3 0.5 No 30 0.93 Yes -17 0.58 No 53 34.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72768117 - NM_001305078 NAT9 1 6.63 3.49 65 2.89 77.35 24 5 No 60 -3.45 No 23 0.64 Yes -23 0.62 No 48 67.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72768179 - NM_001305078 NAT9 1 6.07 3.15 65 -1.75 0 11 4.58 No 17 1.03 Yes 29 0.93 Yes -44 0.87 Yes 26 77.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 72768191 - NM_001305078 NAT9 1 5.63 2.83 69 -20.43 66.6 33 7.07 Yes 5 1.02 Yes 29 0.93 Yes -32 0.87 Yes 38 82.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 72768535 - NM_001305078 NAT9 1 3.68 1.78 54 10.22 87.98 33 6.86 Yes 20 1.07 Yes 32 0.85 Yes -32 0.82 Yes 38 92.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 72768716 - NM_001305078 NAT9 1 0.5 0.24 15 5.49 90.73 10 5.2 No 66 -5.05 No 20 0.37 Yes -20 0.73 Yes 50 81.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 72769825 - NM_001305078 NAT9 1 156.3 56.11 72 9.74 89.53 24 5.38 No 11 1 Yes 20 0.9 Yes -23 0.84 Yes 47 77.51 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 72770079 - NM_001305078 NAT9 1 0.58 0.24 14 4.56 84.21 19 4.9 No 75 0.71 No 18 0.44 Yes -24 0.56 No 46 53.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 72770182 - NM_001305078 NAT9 1 1.56 0.58 31 -1.97 85.08 22 4.69 No NA NA NA 0 0 No -21 0.67 Yes 49 69.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 72770195 - NM_001305078 NAT9 1 0.45 0.19 12 5.47 81.47 9 5.47 No 72 -4.03 No 23 0.72 Yes -23 0.89 Yes 47 86.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 111276850 + NM_018210 NAXD 1 0.26 0.14 7 6.52 93.38 28 5.29 No 26 0.64 No 0 0 No -27 0.64 No 43 64.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 111287819 + NM_018210 NAXD 1 3.8 2.76 62 0.5 0 48 7.07 Yes 35 0.51 No 0 0 No -47 0.74 Yes 23 79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 111289293 + NM_018210 NAXD 1 1.45 0.58 30 6.27 77.36 38 7.07 Yes 25 1.21 Yes 0 0 No -37 0.75 Yes 33 71.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156561896 + NM_144772 NAXE 1 2.02 2.56 67 1.59 0 25 5.57 Yes 12 0.13 No 20 0.88 Yes -24 0.95 Yes 46 82.03 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156562182 + NM_144772 NAXE 1 0.42 0.63 31 5.87 80.69 29 5.85 Yes 27 1.45 Yes 0 0 No -28 0.84 Yes 42 74.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156562380 + NM_144772 NAXE 1 0.06 0.18 11 4.01 76.31 21 5.65 Yes 36 0.8 Yes 0 0 No -20 0.55 No 45 50.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 156563255 + NM_144772 NAXE 1 0.12 0.26 11 5.96 84.36 32 6.16 Yes 69 1.9 Yes 31 0.54 Yes -34 0.53 No 51 78.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 156563736 + NM_144772 NAXE 1 0.52 0.96 46 8.19 82.84 14 5.48 No 1 1.02 Yes 0 0 No -27 0.49 No 44 65.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 15432756 - NM_015909 NBAS 1 0.5 0.26 17 5.19 83.03 24 5.64 Yes 53 0.55 No 0 0 No -27 0.85 Yes 43 80.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 15436935 - NM_015909 NBAS 1 0.2 0.11 7 9.42 90.72 15 4.98 No 50 1.56 Yes 0 0 No -27 0.37 No 12 56.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 15519954 - NM_015909 NBAS 1 0.13 0.1 7 -8.54 0 27 5.29 No 14 1.5 Yes 0 0 No -26 0.88 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 15539988 - NM_015909 NBAS 1 0.11 0.11 7 9.67 85.23 22 5.78 Yes 9 1.35 Yes 0 0 No -21 0.79 Yes 49 81.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 15557311 - NM_015909 NBAS 1 0.4 0.28 13 5.36 82.5 57 6.62 Yes 32 1.25 Yes 0 0 No -28 0.71 Yes 42 56.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 15601371 - NM_015909 NBAS 1 0.14 0.13 9 6.69 81.34 85 9.07 Yes 18 1.11 Yes 0 0 No -30 0.93 Yes 40 96.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 15613528 - NM_015909 NBAS 1 1 0.64 31 5.61 83.55 40 4.76 No 72 -2.8 No 0 0 No -23 0.69 Yes 47 75.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 15618446 - NM_015909 NBAS 1 0.61 0.4 20 6.93 80.08 29 5.15 No 16 0.5 No 25 0.87 Yes -28 0.82 Yes 42 86.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 15652836 - NM_015909 NBAS 1 0.21 0.11 8 7.78 80.86 27 6.32 Yes 51 0.39 No 0 0 No -26 0.64 No 44 78.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 15673410 - NM_015909 NBAS 1 0.46 0.28 16 1.9 67.48 34 6.8 Yes 58 0.86 Yes 0 0 No -30 0.43 No 40 59.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 15689845 - NM_015909 NBAS 1 0.92 0.42 22 2.44 0 33 6.49 Yes 20 0.97 Yes 0 0 No -32 0.45 No 38 63.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 15689849 - NM_015909 NBAS 1 0.4 0.14 8 -0.92 83 29 6.18 Yes 16 0.98 Yes 0 0 No -28 0.51 No 42 64.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 35619117 + NM_015678 NBEA 1 2.32 0.13 7 3.48 73.36 23 5.83 Yes 41 1.28 Yes 0 0 No -22 0.47 No 43 54.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 35624393 + NM_015678 NBEA 1 0.6 0.1 7 2.02 80.89 27 4.09 No 66 0.13 No 20 0.45 Yes -26 0.57 No 47 62.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 35700371 + NM_015678 NBEA 1 4.04 0.13 8 4.33 72.68 25 7.36 Yes 12 1.83 Yes 0 0 No -24 0.91 Yes 46 87.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 35706339 + NM_015678 NBEA 1 3.33 0.38 20 3.33 84.51 27 4.74 No 2 1.51 Yes 0 0 No -26 0.48 No 20 62.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 35734559 + NM_015678 NBEA 1 1.25 0.13 8 5.63 77.75 29 4.43 No 73 1.64 Yes 0 0 No -28 0.57 No 36 49.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 35758598 + NM_015678 NBEA 1 0.78 0.11 7 6.49 86.12 25 6.56 Yes 12 0.79 Yes 0 0 No -24 0.84 Yes 46 92.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 35768368 + NM_015678 NBEA 1 1.21 0.1 7 7.81 84.39 35 7.28 Yes 22 1.19 Yes 0 0 No -34 0.81 Yes 36 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203881321 + NM_001114132 NBEAL1 1 8.5 1.25 48 13.62 95.31 29 5.7 Yes 38 0.27 No 0 0 No -28 0.45 No 42 53.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 203888387 + NM_001114132 NBEAL1 1 1.61 0.22 13 7.05 79.65 72 8.98 Yes 64 1.12 Yes 0 0 No -24 0.57 No 48 40.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 203921334 + NM_001114132 NBEAL1 1 0.91 0.15 10 5.72 90.92 28 5.29 No 56 0.25 No 0 0 No -27 0.63 No 43 49.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 203927001 + NM_001114132 NBEAL1 1 1.22 0.25 16 8.88 86.3 65 6.46 Yes 31 1.24 Yes 32 0.5 Yes -32 0.65 No 38 71.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 203933954 + NM_001114132 NBEAL1 1 3.38 0.46 27 7.2 82.52 24 6.18 Yes 16 0.92 Yes 0 0 No -28 0.54 No 42 60.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 203974883 + NM_001114132 NBEAL1 1 1.04 0.14 9 7.08 0 14 4.47 No 19 0.81 Yes 0 0 No -31 0.74 Yes 39 68.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 203990133 + NM_001114132 NBEAL1 1 3.94 0.65 35 -1.58 61.06 33 6.95 Yes 20 0.44 No 0 0 No -32 0.7 Yes 38 57.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 203990744 + NM_001114132 NBEAL1 1 1.37 0.17 9 3.19 79.22 22 6.47 Yes 70 0.4 No 0 0 No -21 0.5 No 49 47.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 203992595 + NM_001114132 NBEAL1 1 3.5 0.33 20 6.58 83.76 23 7.02 Yes 10 0.66 No 0 0 No -22 0.83 Yes 48 91.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 203996672 + NM_001114132 NBEAL1 1 1.15 0.14 10 -2.39 81.44 30 6.4 Yes 36 0.85 Yes 25 0.74 Yes -29 0.41 No 41 60.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 204031955 + NM_001114132 NBEAL1 1 1.3 0.17 11 -0.53 0 9 3.87 No 64 0.4 No 0 0 No -28 0.82 Yes 42 72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 204048024 + NM_001114132 NBEAL1 1 2.83 0.26 17 7.72 79.66 26 4.09 No 37 0.47 No 0 0 No -25 0.7 Yes 45 73.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 204055369 + NM_001114132 NBEAL1 1 2.61 0.43 20 1.69 69.22 17 4.99 No 4 1.38 Yes 0 0 No -23 0.74 Yes 47 62.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47031166 + NM_015175 NBEAL2 1 0.4 0.42 22 6.4 81.15 45 6.49 Yes 4 -0.35 No 0 0 No -39 0.48 No 54 41.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47032021 + NM_015175 NBEAL2 1 0.13 0.17 11 7.19 80.21 41 6.32 Yes 46 2.33 Yes 0 0 No -40 0.85 Yes 30 88.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47032604 + NM_015175 NBEAL2 1 0.4 0.4 22 0.99 81.44 26 6.62 Yes 13 1.25 Yes 0 0 No -25 0.93 Yes 45 89.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47032626 + NM_015175 NBEAL2 1 0.25 0.28 14 10.43 83.75 25 5.57 Yes 35 1.26 Yes 0 0 No -47 0.49 No 46 61.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47034415 + NM_015175 NBEAL2 1 5.54 0.58 25 8.02 85.76 23 6.48 Yes 10 1.19 Yes 0 0 No -22 0.94 Yes 48 96.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47035365 + NM_015175 NBEAL2 1 3.41 0.35 22 8.43 98.32 57 7.68 Yes 56 -0.95 No 0 0 No -40 0.52 No 30 59.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47034415 + NM_015175 NBEAL2 1 4.01 0.19 11 8.02 85.76 23 6.48 Yes 10 1.19 Yes 0 0 No -22 0.94 Yes 48 96.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47037968 + NM_015175 NBEAL2 1 0.44 0.49 25 7.83 89.1 16 5.39 No 71 0.18 No 0 0 No -19 0.75 Yes 51 86.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47040502 + NM_015175 NBEAL2 1 0.28 0.13 9 6.93 86.11 57 7.94 Yes 59 0.22 No 0 0 No -17 0.51 No 53 87.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 47040529 + NM_015175 NBEAL2 1 0.37 0.17 10 -0.61 79.77 23 4.26 No NA NA NA 0 0 No -29 0.59 No 41 69.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47040759 + NM_015175 NBEAL2 1 9.57 7.17 70 5.38 84.13 17 6.56 Yes 4 1.65 Yes 0 0 No -22 0.82 Yes 48 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47041137 + NM_015175 NBEAL2 1 0.15 0.13 7 2.89 78.55 11 5.06 No 31 0.76 No 0 0 No -43 0.76 Yes 27 73.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47041685 + NM_015175 NBEAL2 1 0.13 0.15 8 -0.17 0 70 7.83 Yes 63 1.36 Yes 27 0.87 Yes -27 0.69 Yes 13 58.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 47042042 + NM_015175 NBEAL2 1 0.29 0.25 14 8.3 75.69 25 5.22 No 34 0.55 No 0 0 No -24 0.63 No 46 75.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 47042877 + NM_015175 NBEAL2 1 0.17 0.22 13 7.93 86.85 29 5.31 No 73 -5.39 No 0 0 No -29 0.57 No 34 55.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47043421 + NM_015175 NBEAL2 1 0.12 0.15 9 -0.52 0 17 4.58 No 19 1.29 Yes 0 0 No -31 0.56 No 35 66.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47044927 + NM_015175 NBEAL2 1 0.19 0.19 11 3.78 77.68 41 6.85 Yes 28 1.37 Yes 0 0 No -40 0.87 Yes 30 92.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47046479 + NM_015175 NBEAL2 1 0.53 0.64 29 7.13 85.57 21 5.2 No 35 1.22 Yes 0 0 No -47 0.35 No 50 43.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47046913 + NM_015175 NBEAL2 1 0.14 0.18 12 7.57 88.89 27 7.78 Yes 50 -0.91 No 0 0 No -26 0.69 Yes 44 76.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47047663 + NM_015175 NBEAL2 1 0.3 0.35 18 -2.63 0 12 4.24 No 19 2.26 Yes 0 0 No -31 0.9 Yes 39 88.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47047808 + NM_015175 NBEAL2 1 0.56 0.9 37 1.02 67.39 20 5.87 Yes 55 -4.26 No 19 0.97 Yes -19 0.61 No 45 28.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 47049008 + NM_015175 NBEAL2 1 0.22 0.25 17 1.55 0 54 6.67 Yes 8 1.42 Yes 26 0.93 Yes -20 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 90950022 - NM_001024688 NBN 1 0.1 0.24 15 0.87 71.11 24 5.06 No 0 0.4 No 0 0 No -23 0.62 No 58 29.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90955068 - NM_001024688 NBN 1 0.07 0.18 11 3.93 68.73 41 7.1 Yes 19 0.77 No 0 0 No -31 0.69 Yes 39 48.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90958429 - NM_001024688 NBN 1 0.15 0.32 19 5.15 83.12 21 4.58 No 8 0.12 No 0 0 No -20 0.46 No 50 64.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90958506 - NM_001024688 NBN 1 0.19 0.46 21 0.08 72.35 12 5.01 No 61 1.73 Yes 0 0 No -44 0.47 No 26 57.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90970251 - NM_001024688 NBN 1 0.09 0.24 13 9.95 79.76 32 5.45 No 19 1.4 Yes 0 0 No -31 0.6 No 39 70.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90975626 - NM_001024688 NBN 1 0.04 0.11 8 3.86 74.08 35 7.64 Yes 71 1.76 Yes 0 0 No -34 0.58 No 44 82.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90983518 - NM_001024688 NBN 1 0.04 0.14 9 -13.3 0 31 5.79 Yes 57 0.64 No 0 0 No -31 0.31 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90992657 - NM_001024688 NBN 1 0.96 2.72 66 7.57 90.14 25 5.31 No 12 0.48 No 0 0 No -24 0.73 Yes 46 87.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90993081 - NM_001024688 NBN 1 1.57 2.92 66 8.62 82.24 31 6.08 Yes 65 1 Yes 30 0.49 Yes -30 0.74 Yes 40 78.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 90993081 - NM_001024688 NBN 1 0.07 0.15 10 8.62 82.24 31 6.08 Yes 65 1 Yes 30 0.49 Yes -30 0.74 Yes 40 78.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 90993081 - NM_001024688 NBN 1 0.14 0.28 13 8.62 82.24 31 6.08 Yes 65 1 Yes 30 0.49 Yes -30 0.74 Yes 40 78.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 148558615 + NM_001170755 NBPF15 1 32.52 11.38 72 10.39 95.65 34 5.76 Yes 37 1.57 Yes 0 0 No -28 0.74 Yes 42 85.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 148558619 + NM_001170755 NBPF15 1 0.91 0.29 17 5.29 0 38 6.09 Yes 41 1.56 Yes 0 0 No -32 0.72 Yes 38 79.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 144615057 + NM_001037675 NBPF9 1 2.72 0.36 20 4.93 83.54 25 5.83 Yes 28 1.72 Yes 25 0.27 Yes -24 0.79 Yes 46 89.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 144615081 + NM_001037675 NBPF9 1 1.88 0.28 14 -4.75 66.07 30 4.15 No 52 1.71 Yes 25 0.27 Yes -29 0.84 Yes 41 91.15 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 144615129 + NM_001037675 NBPF9 1 4.55 0.71 31 0.3 60.6 29 6.56 Yes 16 2.26 Yes 29 0.89 Yes -28 0.87 Yes 42 84.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 144823892 + NM_001037675 NBPF9 1 5.72 0.33 18 8.5 90.64 30 5.38 No 17 0.86 Yes 0 0 No -29 0.86 Yes 41 67.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41338217 + NM_005899 NBR1 1 0.18 0.22 13 5.94 67.75 46 5.78 Yes 10 0.78 Yes 0 0 No -41 0.87 Yes 29 95.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41353705 + NM_005899 NBR1 1 0.12 0.14 9 -14.19 66.07 31 7.03 Yes 34 0.63 No 0 0 No -30 0.62 No 40 67.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41354656 + NM_005899 NBR1 1 0.2 0.21 11 5.32 73.24 25 6.24 Yes -4 1.07 Yes 23 0.97 Yes -24 0.95 Yes 46 93.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 41361575 + NM_005899 NBR1 1 0.13 0.13 7 6.69 88.7 57 8.16 Yes 44 1.9 Yes 39 0.58 Yes -22 0.72 Yes 48 68.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 102701388 - NM_001040624 NCALD 1 0.14 0.17 9 6.18 75.08 89 10.89 Yes -2 1.77 Yes 27 0.9 Yes -27 0.9 Yes 43 86.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 102702142 - NM_001040624 NCALD 1 0.26 0.18 13 3.16 0 28 8.17 Yes 65 1.18 Yes 0 0 No -27 0.97 Yes 43 95.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 102702146 - NM_001040624 NCALD 1 0.15 0.13 8 5.26 76.8 24 7.92 Yes 61 1.19 Yes 0 0 No -23 0.97 Yes 47 96.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 102704800 - NM_001040624 NCALD 1 1.35 1.28 40 12.16 86.18 30 5.48 No 17 0.38 No 0 0 No -29 0.88 Yes 41 85.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 102730871 - NM_001040624 NCALD 1 0.13 0.1 7 9.03 93.27 25 5.55 No 64 -4.95 No 0 0 No -24 0.83 Yes 46 84.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6608397 + NM_014865 NCAPD2 1 0.33 1.07 39 8.85 83.64 53 9.13 Yes 40 0.02 No 0 0 No -36 0.56 No 34 48.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6608422 + NM_014865 NCAPD2 1 0.09 0.25 15 3.99 85.08 23 4.57 No 16 -1.77 No 0 0 No -27 0.31 No 12 40.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6611488 + NM_014865 NCAPD2 1 0.09 0.26 14 11 86.35 37 6.4 Yes 24 0.41 No 0 0 No -36 0.36 No 29 47.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6623638 + NM_014865 NCAPD2 1 0.27 0.88 38 -4.25 0 14 4.24 No 9 0.88 Yes 0 0 No -28 0.36 No 42 61.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6623940 + NM_014865 NCAPD2 1 0.06 0.15 10 -8.72 74.81 41 9.3 Yes 57 1.2 Yes 0 0 No -28 0.52 No 42 65.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6626505 + NM_014865 NCAPD2 1 0.19 0.46 28 0.76 67.55 43 5.81 Yes 65 -6.28 No 24 0.95 Yes -30 0.42 No 27 58.73 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 6626950 + NM_014865 NCAPD2 1 0.59 1.29 46 0.88 0 13 3.87 No 8 1.15 Yes 18 0.77 Yes -24 0.81 Yes 46 84.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6630135 + NM_014865 NCAPD2 1 0.06 0.19 14 4.79 77.41 23 5.74 Yes 10 1.24 Yes 26 0.74 Yes -22 0.73 Yes 44 78.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6630155 + NM_014865 NCAPD2 1 0.08 0.24 16 -0.97 0 25 5.39 No 30 1.23 Yes 0 0 No -24 0.9 Yes 46 94.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6632049 + NM_014865 NCAPD2 1 0.56 1.15 42 3.67 77.43 43 6.64 Yes 15 0.81 Yes 27 0.85 Yes -27 0.77 Yes 43 69.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6637118 + NM_014865 NCAPD2 1 0.35 0.99 39 6.13 75.64 20 4.58 No 31 0.84 Yes 25 0.33 Yes -24 0.73 Yes 46 68.22 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 6637175 + NM_014865 NCAPD2 1 0.04 0.13 8 3.62 75.29 40 6.53 Yes 70 -1.88 No 0 0 No -24 0.69 Yes 42 46.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 6638138 + NM_014865 NCAPD2 1 0.08 0.18 9 8.28 89.48 33 4.41 No 39 0.9 Yes 0 0 No -32 0.78 Yes 38 59.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 6638682 + NM_014865 NCAPD2 1 0.11 0.26 15 3.84 0 22 7.48 Yes 9 1.17 Yes 0 0 No -27 0.68 Yes 43 66.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 134023094 - NM_015261 NCAPD3 1 0.29 0.24 15 -0.73 75.39 29 6.28 Yes 2 1.2 Yes 0 0 No -28 0.83 Yes 42 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 134026714 - NM_015261 NCAPD3 1 1.14 0.92 40 3.25 81.1 20 4.69 No 7 0.97 Yes 0 0 No -19 0.93 Yes 51 94.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 134026818 - NM_015261 NCAPD3 1 0.83 0.65 32 8.1 90.75 19 5.39 No 48 0.93 Yes 0 0 No -22 0.69 Yes 48 72.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 134029967 - NM_015261 NCAPD3 1 0.25 0.24 14 -7.76 80.14 30 5.83 Yes 40 0.08 No 0 0 No -24 0.52 No 38 79.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 134038424 - NM_015261 NCAPD3 1 0.24 0.26 17 6.24 76.8 23 6.16 Yes 44 -2.7 No 22 0.47 Yes -25 0.46 No 45 41.44 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 134038496 - NM_015261 NCAPD3 1 0.13 0.19 12 -13.88 70.02 33 4.43 No 37 1.03 Yes 0 0 No -28 0.64 No 42 72.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 134047855 - NM_015261 NCAPD3 1 0.15 0.11 8 2.93 74.91 23 5.38 No 54 0.62 No 0 0 No -22 0.7 Yes 48 71.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 134053049 - NM_015261 NCAPD3 1 3.26 1.9 59 6.42 89.91 28 6.07 Yes 15 2.15 Yes 27 0.89 Yes -27 0.87 Yes 43 88.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 134064630 - NM_015261 NCAPD3 1 0.25 0.28 18 -3.45 0 28 6.24 Yes 35 1.18 Yes 0 0 No -27 0.61 No 40 53.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 134064633 - NM_015261 NCAPD3 1 0.06 0.1 7 -15.44 0 25 6.02 Yes 32 1.18 Yes 0 0 No -24 0.61 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 134073765 - NM_015261 NCAPD3 1 0.16 0.19 14 3.67 71.39 43 4.68 No 55 1 Yes 0 0 No -32 0.57 No 40 68.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 134079127 - NM_015261 NCAPD3 1 0.31 0.38 20 -8.49 0 19 4.36 No 61 -4.93 No 28 0.45 Yes -18 0.79 Yes 52 32.25 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 134093377 - NM_015261 NCAPD3 1 1.89 1.46 56 5.39 83.27 25 5.76 Yes 4 0.47 No 24 0.91 Yes -24 0.94 Yes 46 95.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 17818473 + NM_022346 NCAPG 1 0.19 0.19 8 3.79 69.87 37 7 Yes 38 0.53 No 0 0 No -39 0.5 No 34 80.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 17823837 + NM_022346 NCAPG 1 0.12 0.21 10 4.74 84.41 29 5.29 No 16 1.07 Yes 0 0 No -28 0.59 No 42 73.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 17825253 + NM_022346 NCAPG 1 0.13 0.28 17 1.92 60.57 34 6.3 Yes 75 -3.54 No 23 0.83 Yes -29 0.37 No 41 61.89 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 17825270 + NM_022346 NCAPG 1 0.08 0.18 11 -17.44 0 24 4.89 No -4 0.32 No 32 0.8 Yes -24 0.78 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 17825294 + NM_022346 NCAPG 1 1.11 2.35 58 6.61 89.25 33 5.83 Yes 42 0.19 No 32 0.8 Yes -27 0.76 Yes 43 73.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 17825350 + NM_022346 NCAPG 1 0.23 0.54 32 3.57 80.18 30 6.05 Yes 35 0.01 No 0 0 No -30 0.42 No 43 56.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 17827070 + NM_022346 NCAPG 1 0.84 1.65 57 7.72 88.74 33 5.89 Yes 56 -3.6 No 0 0 No -28 0.28 No 42 23.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 17836042 + NM_022346 NCAPG 1 0.06 0.1 7 3.52 77.69 28 7.39 Yes 68 -5.08 No 0 0 No -27 0.8 Yes 43 59.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 158425172 - NR_104054 NCAPG2 1 0.09 0.15 8 -6.47 71.36 29 5.37 No 70 0.92 Yes 0 0 No -28 0.77 Yes 42 81.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 158434247 - NR_104054 NCAPG2 1 9.98 15.65 72 8.01 83.77 27 7.25 Yes 70 0.83 Yes 26 0.82 Yes -26 0.89 Yes 44 92.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 158439710 - NR_104054 NCAPG2 1 0.23 0.28 14 1.57 0 46 5.92 Yes 41 1.37 Yes 0 0 No -32 0.77 Yes 38 47.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 158440995 - NR_104054 NCAPG2 1 0.28 0.31 15 8.7 85.4 15 10.34 Yes 24 0.94 Yes 0 0 No -26 0.44 No 44 51.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 158445102 - NR_104054 NCAPG2 1 0.42 0.36 18 1.93 83.84 22 4.69 No 9 0.4 No 0 0 No -21 0.82 Yes 49 75.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 158448517 - NR_104054 NCAPG2 1 0.1 0.13 9 11.39 93.38 20 5.78 Yes 7 0.65 No 0 0 No -19 0.59 No 51 64.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 158481818 - NR_104054 NCAPG2 1 0.24 0.28 15 -1.43 66.49 35 7.26 Yes 22 0.91 Yes 0 0 No -40 0.45 No 30 41.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 158482673 - NR_104054 NCAPG2 1 0.24 0.33 21 4.81 67.29 23 5.7 Yes 10 0.66 No 22 0.79 Yes -22 0.39 No 36 47.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 158486186 - NR_104054 NCAPG2 1 0.08 0.11 7 -7.61 0 48 6.31 Yes 14 1.09 Yes 0 0 No -26 0.86 Yes 44 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 158489092 - NR_104054 NCAPG2 1 0.95 1.31 49 4.69 78.83 25 6.22 Yes 76 0.65 No 0 0 No -36 0.45 No 34 59.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 158490289 - NR_104054 NCAPG2 1 0.32 0.46 22 11.98 93.23 25 5.57 Yes 31 0.94 Yes 0 0 No -30 0.56 No 40 63.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 97007352 + NM_015341 NCAPH 1 0.46 0.26 15 4.7 84.87 16 2.73 No 48 0.87 Yes 19 0.77 Yes -19 0.51 No 47 64.72 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 97007412 + NM_015341 NCAPH 1 43.69 23.33 72 4.25 86.99 13 5.51 No 0 1.42 Yes 26 0.45 Yes -20 0.57 No 45 54.34 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 97007451 + NM_015341 NCAPH 1 7.72 3.93 70 8.12 86.77 22 5.1 No 39 1.41 Yes 21 0.48 Yes -19 0.71 Yes 51 77.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 97007790 + NM_015341 NCAPH 1 0.1 0.1 7 -11.72 74 33 6.08 Yes 64 -2.48 No 0 0 No -32 0.39 No 35 59.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 97017652 + NM_015341 NCAPH 1 0.54 0.63 33 9.14 88.08 16 6.16 Yes 68 0.93 Yes 0 0 No -31 0.65 No 39 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 97024761 + NM_015341 NCAPH 1 0.21 0.25 16 -1.86 0 18 5.18 No 60 0.49 No 23 0.44 Yes -17 0.57 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 97024771 + NM_015341 NCAPH 1 0.13 0.14 9 -2.96 0 28 5.99 Yes 70 0.48 No 23 0.44 Yes -27 0.53 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 97025883 + NM_015341 NCAPH 1 0.25 0.25 14 -0.77 67.99 25 6.13 Yes 12 2.19 Yes 0 0 No -24 0.71 Yes 46 86.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97031438 + NM_015341 NCAPH 1 0.36 0.4 23 4.05 78.88 20 4.36 No 36 1.1 Yes 0 0 No -19 0.47 No 51 62.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 97031544 + NM_015341 NCAPH 1 0.07 0.11 8 -13.12 62.7 40 6.23 Yes 31 0.39 No 0 0 No -35 0.48 No 35 56.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 97031555 + NM_015341 NCAPH 1 0.27 0.33 19 -0.76 0 21 4.47 No 42 0.38 No 0 0 No -20 0.45 No 50 48.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 97031706 + NM_015341 NCAPH 1 10.93 15.04 72 1.52 65.9 33 8.45 Yes 20 2.48 Yes 32 0.93 Yes -25 0.86 Yes 45 66.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 97036252 + NM_015341 NCAPH 1 4.47 3.47 67 7.73 90.33 22 5.29 No 42 1.19 Yes 0 0 No -21 0.67 Yes 49 54.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 50950710 + NM_001185011 NCAPH2 1 0.08 0.1 7 7.52 69.35 31 5.45 No 15 1.02 Yes 0 0 No -30 0.8 Yes 40 87.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50954148 + NM_001185011 NCAPH2 1 1.12 1.5 52 8.47 82.63 42 6.67 Yes 29 0.69 No 32 0.42 Yes -32 0.48 No 38 68.88 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50956033 + NM_001185011 NCAPH2 1 0.11 0.14 8 5.55 92.27 21 4.83 No 18 -1.42 No 0 0 No -20 0.57 No 53 68.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50956556 + NM_001185011 NCAPH2 1 1.73 2.89 66 1.87 83.4 23 4.9 No 52 -2.22 No 25 0.79 Yes -20 0.9 Yes 50 86.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50959947 + NM_001185011 NCAPH2 1 0.1 0.14 10 7.81 83.78 11 6.16 Yes NA NA NA 26 0.86 Yes -17 0.43 No 53 57.38 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50959974 + NM_001185011 NCAPH2 1 0.24 0.36 19 -9.31 70.73 30 6 Yes NA NA NA 0 0 No -29 0.71 Yes 41 88.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50960173 + NM_001185011 NCAPH2 1 1.07 1.21 46 2.68 0 28 5.48 No 15 0.79 Yes 0 0 No -27 0.9 Yes 43 89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50960420 + NM_001185011 NCAPH2 1 0.25 0.26 15 1.26 0 11 3.87 No 11 1.02 Yes 0 0 No -23 0.64 No 47 91.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 50960929 + NM_001185011 NCAPH2 1 893.5 126.57 72 8.58 79.34 21 6.68 Yes 8 1.22 Yes 31 0.44 Yes -20 0.63 No 50 66.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 50960941 + NM_001185011 NCAPH2 1 0.68 0.11 7 -0.36 0 18 4.48 No 20 1.21 Yes 21 0.55 Yes -32 0.39 No 19 43.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 50961085 + NM_001185011 NCAPH2 1 0.22 0.33 18 -1.98 0 10 4 No 47 -1.41 No 18 0.94 Yes -17 0.61 No 53 42.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50961252 + NM_001185011 NCAPH2 1 0.08 0.11 7 -11.99 71.17 16 5.74 Yes 3 1.66 Yes 0 0 No -22 0.52 No 44 73.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 50961679 + NM_001185011 NCAPH2 1 0.5 0.65 29 0.14 68.06 10 4.79 No 21 1.44 Yes 0 0 No -42 0.32 No 37 61.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50961693 + NM_001185011 NCAPH2 1 0.11 0.14 8 -11.67 0 18 4.24 No 35 1.42 Yes 0 0 No -18 0.64 No 23 31.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50961696 + NM_001185011 NCAPH2 1 0.15 0.19 12 -6.27 0 10 4.58 No 38 1.43 Yes 0 0 No -21 0.83 Yes 59 40.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 100409776 + NM_002486 NCBP1 1 0.11 0.38 22 1.35 80.2 31 5.65 Yes 47 1.12 Yes 0 0 No -30 0.76 Yes 40 52.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 100409807 + NM_002486 NCBP1 1 0.05 0.15 9 7.55 84.43 18 5.47 No 74 1.09 Yes 0 0 No -17 0.63 No 53 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 100410381 + NM_002486 NCBP1 1 0.08 0.19 9 7.24 84.23 24 5.04 No 11 0.94 Yes 0 0 No -23 0.85 Yes 47 90.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100410296 + NM_002486 NCBP1 1 0.05 0.13 7 1.82 0 10 4 No 7 0.76 No 0 0 No -33 0.79 Yes 37 73.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 100410381 + NM_002486 NCBP1 1 2.08 4.64 70 7.24 84.23 24 5.04 No 11 0.94 Yes 0 0 No -23 0.85 Yes 47 90.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100415423 + NM_002486 NCBP1 1 0.2 0.44 23 4.74 84.41 32 6 Yes 32 1.46 Yes 0 0 No -31 0.87 Yes 39 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100417170 + NM_002486 NCBP1 1 0.15 0.4 21 -2.34 0 19 3.23 No 44 -1.54 No 0 0 No -18 0.37 No 46 58.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 100418297 + NM_002486 NCBP1 1 0.09 0.18 12 2.04 0 29 6.23 Yes 16 0.24 No 0 0 No -28 0.58 No 38 43.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 100420817 + NM_002486 NCBP1 1 0.16 0.38 22 6.14 84.13 39 6.56 Yes 4 0.64 No 0 0 No -38 0.92 Yes 32 95.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 100420971 + NM_002486 NCBP1 1 0.29 0.65 40 8.91 83.45 27 5.74 Yes 59 0.76 No 0 0 No -29 0.57 No 41 44.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 196664154 - NM_001042540 NCBP2 1 0.14 0.33 21 5.26 74.69 30 5.74 Yes 62 0.39 No 0 0 No -29 0.94 Yes 41 93.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 3717776 - NM_001114118 NCBP3 1 0.11 0.11 7 -9.57 0 30 7.14 Yes 17 0.96 Yes 0 0 No -29 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 3727387 - NM_001114118 NCBP3 1 1.27 1.31 46 5.32 83.53 27 6.77 Yes 14 1.25 Yes 30 0.65 Yes -30 0.66 Yes 40 64.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 3728327 - NM_001114118 NCBP3 1 1.1 0.82 40 3.85 81.15 21 4.51 No 39 0.36 No 32 0.61 Yes -21 0.6 No 49 44.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 3742936 - NM_001114118 NCBP3 1 0.13 0.13 7 3.89 77.24 35 7 Yes 22 1.48 Yes 0 0 No -34 0.54 No 36 85.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 3745898 - NM_001114118 NCBP3 1 0.17 0.15 9 9.57 85.84 27 5.29 No 22 0.25 No 0 0 No -21 0.63 No 49 68.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 36025487 + NM_001014841 NCDN 1 0.58 0.43 22 1.37 80.33 27 4.83 No 50 -3.5 No 0 0 No -19 0.59 No 50 55.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 36025910 + NM_001014841 NCDN 1 0.36 0.28 15 3.82 66.19 27 6.56 Yes 70 1.36 Yes 23 0.93 Yes -26 0.55 No 44 74.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 36027974 + NM_001014841 NCDN 1 0.12 0.14 8 5.76 80.02 9 5.92 Yes 49 -2.76 No 21 0.92 Yes -28 0.4 No 42 36.68 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 36028392 + NM_001014841 NCDN 1 0.35 0.19 14 9.09 91.53 31 5.97 Yes 65 0.32 No 0 0 No -36 0.89 Yes 34 85.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36028392 + NM_001014841 NCDN 1 1.35 0.85 41 9.09 91.53 31 5.97 Yes 65 0.32 No 0 0 No -36 0.89 Yes 34 85.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36032308 + NM_001014841 NCDN 1 0.31 0.25 14 10.54 82.12 23 9.64 Yes 10 0.99 Yes 0 0 No -22 0.65 No 39 50.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 172365825 - NM_001146276 NCEH1 1 1.9 0.42 23 -0.52 56.92 33 7.7 Yes 64 1.3 Yes 0 0 No -32 0.63 No 34 66.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 74192652 + NM_000265 NCF1 1 0.46 1.58 51 7.45 86.87 16 7.48 Yes 3 1.13 Yes 33 0.33 Yes -25 0.48 No 37 71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 74193428 + NM_000265 NCF1 1 0.04 0.17 10 -10.84 0 29 7.85 Yes 16 1.25 Yes 0 0 No -28 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 74193457 + NM_000265 NCF1 1 0.15 0.5 23 -5.55 81.93 22 4.84 No 45 1.23 Yes 0 0 No -22 0.75 Yes 13 57.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 74193461 + NM_000265 NCF1 1 0.02 0.1 7 0.52 0 26 5.2 No 49 1.22 Yes 0 0 No -26 0.73 Yes 44 54.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 74194502 + NM_000265 NCF1 1 0.02 0.15 10 8.53 87.55 18 6.4 Yes 5 1.01 Yes 34 0.56 Yes -17 0.88 Yes 53 92.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 74195897 + NM_000265 NCF1 1 0.03 0.17 11 9.98 91.83 26 5.97 Yes 38 0.9 Yes 29 0.77 Yes -29 0.55 No 42 80.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 74197307 + NM_000265 NCF1 1 0.12 0.92 42 9.06 84.72 22 5.92 Yes 38 2.09 Yes 0 0 No -21 0.81 Yes 20 65.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 74200784 + NM_000265 NCF1 1 0.02 0.19 10 4.3 0 34 5.98 Yes 21 0.02 No 0 0 No -26 0.7 Yes 37 74.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 74200918 + NM_000265 NCF1 1 0.16 1.19 46 8.41 90.79 23 7 Yes 10 1.79 Yes 0 0 No -22 0.86 Yes 48 90.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 74202083 + NM_000265 NCF1 1 0.17 1.24 47 5.71 72.87 40 6.18 Yes 76 0.48 No 0 0 No -24 0.54 No 49 63.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 74202290 + NM_000265 NCF1 1 0.06 0.42 23 10.12 77.93 27 6.31 Yes 14 1.3 Yes 20 0.88 Yes -26 0.78 Yes 44 65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 74202332 + NM_000265 NCF1 1 0.26 1.94 61 -3.52 0 26 5.57 Yes 56 1.27 Yes 0 0 No -25 0.85 Yes 45 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 74202831 + NM_000265 NCF1 1 0.42 2.1 58 6.84 83.51 26 5.86 Yes 66 0.85 Yes 0 0 No -21 0.64 No 48 32.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 74202926 + NM_000265 NCF1 1 0.02 0.1 7 2.06 64.59 27 5.46 No 37 0.88 Yes 0 0 No -49 0.71 Yes 21 44.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 74202996 + NM_000265 NCF1 1 0.08 0.43 25 7.64 87.56 21 5 No 30 0.54 No 0 0 No -21 0.79 Yes 49 53.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 72639745 + NR_003186 NCF1B 1 1.73 0.18 10 7.8 82.09 28 7.78 Yes 15 1.26 Yes 27 0.85 Yes -27 0.86 Yes 43 85.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 72639920 + NR_003186 NCF1B 1 1.44 0.25 17 5.85 82.19 23 6.77 Yes 39 1.68 Yes 29 0.37 Yes -22 0.87 Yes 48 79.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 72642212 + NR_003186 NCF1B 1 0.18 0.13 8 9.98 91.83 26 5.97 Yes 38 0.9 Yes 0 0 No -29 0.55 No 42 80.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 72647105 + NR_003186 NCF1B 1 0.44 0.39 19 4.3 0 34 5.98 Yes 21 0.02 No 0 0 No -26 0.7 Yes 37 74.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 72648610 + NR_003186 NCF1B 1 0.26 0.14 9 10.12 77.93 27 6.31 Yes 14 1.3 Yes 40 0.11 Yes -26 0.78 Yes 44 65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 72649151 + NR_003186 NCF1B 1 0.4 0.46 22 6.84 83.51 26 5.86 Yes 66 0.85 Yes 0 0 No -21 0.64 No 48 32.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72649179 + NR_003186 NCF1B 1 0.19 0.18 12 1.83 73.9 16 4.67 No 3 -0.31 No 25 0.67 Yes -20 0.49 No 50 35.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 74573108 - NR_003187 NCF1C 1 0.11 0.26 17 7.64 87.56 21 5 No 30 0.54 No 0 0 No -21 0.79 Yes 49 54.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 74573245 - NR_003187 NCF1C 1 0.11 0.18 11 1.83 73.9 16 4.67 No 3 -0.31 No 25 0.91 Yes -20 0.49 No 50 35.1 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 74573273 - NR_003187 NCF1C 1 0.57 1.26 49 6.84 83.51 26 5.86 Yes 66 0.85 Yes 0 0 No -21 0.64 No 48 32.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 74573772 - NR_003187 NCF1C 1 0.36 1.13 42 -3.52 0 26 5.57 Yes 56 1.27 Yes 0 0 No -25 0.85 Yes 45 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 74573814 - NR_003187 NCF1C 1 0.22 0.63 34 10.12 77.93 27 6.31 Yes 14 1.3 Yes 20 0.87 Yes -26 0.78 Yes 44 65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 74574021 - NR_003187 NCF1C 1 0.41 1.11 47 5.71 72.87 40 6.18 Yes 76 0.48 No 0 0 No -24 0.54 No 49 63.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 74575320 - NR_003187 NCF1C 1 0.17 0.44 25 4.3 0 34 5.98 Yes 21 0.02 No 0 0 No -26 0.7 Yes 37 74.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 74578799 - NR_003187 NCF1C 1 0.3 0.67 33 9.06 84.72 22 5.92 Yes 38 2.09 Yes 0 0 No -21 0.81 Yes 20 65.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 74580217 - NR_003187 NCF1C 1 0.12 0.33 18 9.98 91.83 26 5.97 Yes 38 0.9 Yes 0 0 No -29 0.55 No 42 80.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 74582649 - NR_003187 NCF1C 1 0.06 0.1 7 0.52 0 26 5.2 No 49 1.22 Yes 0 0 No -26 0.73 Yes 44 54.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 74583458 - NR_003187 NCF1C 1 0.06 0.11 8 7.45 86.87 16 7.48 Yes 3 1.13 Yes 0 0 No -25 0.48 No 37 71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 74587016 - NR_003187 NCF1C 1 0.19 0.29 15 2.97 0 43 5.26 No 72 -3.27 No 0 0 No -43 0.58 No 28 72.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 183529426 - NM_001127651 NCF2 1 0.12 0.38 18 -0.74 63.3 30 5.39 No 53 1.09 Yes 21 0.91 Yes -42 0.6 No 28 64.08 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 183534496 - NM_001127651 NCF2 1 0.11 0.21 12 -4.09 81.01 23 5.7 Yes 10 0.83 Yes 0 0 No -22 0.76 Yes 48 76.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183535032 - NM_001127651 NCF2 1 0.07 0.13 9 8 79.61 79 5.51 No 8 0.22 No 0 0 No -20 0.59 No 50 65.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 183542425 - NM_001127651 NCF2 1 0.06 0.19 13 -1.54 66.53 37 5.56 Yes 36 0.88 Yes 0 0 No -36 0.67 Yes 34 62.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 183555463 - NM_001127651 NCF2 1 0.08 0.17 10 3.94 0 25 6.24 Yes 12 0.95 Yes 0 0 No -24 0.86 Yes 46 82.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37259188 + NM_000631 NCF4 1 0.1 0.11 7 4.19 84.38 33 7.05 Yes 20 1.17 Yes 0 0 No -32 0.73 Yes 38 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136582153 + NM_006153 NCK1 1 3.19 0.19 11 4.83 84 25 6.11 Yes 12 0.69 No 0 0 No -24 0.96 Yes 46 97.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 136586272 + NM_006153 NCK1 1 5.69 0.71 34 10.07 88.27 27 7.48 Yes 14 1.56 Yes 26 0.89 Yes -26 0.93 Yes 44 93.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 136665770 + NM_006153 NCK1 1 0.14 0.15 11 7.93 77.39 25 6.37 Yes 2 0.31 No 0 0 No -24 0.46 No 48 44.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 136561136 - NR_110177 NCK1-AS1 1 16.94 2.6 61 5.62 73.53 25 7.06 Yes 12 1.33 Yes 0 0 No -24 0.92 Yes 46 94.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136561139 - NR_110177 NCK1-AS1 1 8.71 1.32 50 6.67 79.72 22 6.86 Yes 9 1.33 Yes 0 0 No -21 0.89 Yes 49 90.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136561428 - NR_110177 NCK1-AS1 1 1 0.18 10 4.62 83.07 16 4.58 No 57 1.23 Yes 20 0.93 Yes -47 0.55 No 23 31.89 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 136567993 - NR_110177 NCK1-AS1 1 0.81 0.17 11 5.98 93.18 28 5.29 No 32 0.67 No 0 0 No -27 0.57 No 21 37.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 136577446 - NR_110177 NCK1-AS1 1 12.6 2.82 62 11.67 94.52 35 7.42 Yes 53 0.56 No 27 0.51 Yes -27 0.37 No 45 43.73 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 106362634 + NM_001004722 NCK2 1 2.55 0.44 24 9.3 91.34 28 6.78 Yes 1 -1.7 No 0 0 No -27 0.86 Yes 43 82.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 106433924 + NM_001004722 NCK2 1 0.08 0.11 7 5.48 76.11 29 6.31 Yes 16 0.48 No 0 0 No -28 0.87 Yes 42 88.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 106440378 + NM_001004722 NCK2 1 0.16 0.19 11 7.45 78.49 65 8.4 Yes 4 1.71 Yes 0 0 No -36 0.74 Yes 34 71.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 106458586 + NM_001004722 NCK2 1 0.16 0.18 10 7.94 90.83 26 5.1 No 49 0.58 No 0 0 No -25 0.86 Yes 45 84.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 106463275 + NM_001004722 NCK2 1 0.36 0.42 24 8.12 83.53 22 4.9 No 9 0.62 No 0 0 No -21 0.77 Yes 49 69.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 106471506 + NM_001004722 NCK2 1 4.34 5.1 69 -2.96 73.31 33 5.97 Yes 66 1.06 Yes 29 0.85 Yes -32 0.89 Yes 38 93.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 106494878 + NM_001004722 NCK2 1 1.77 0.25 12 3.46 70.67 18 5.4 No 5 1.6 Yes 0 0 No -27 0.82 Yes 43 85.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 106497783 + NM_001004722 NCK2 1 642.41 71.85 72 12.88 90.83 22 5.29 No 9 1.41 Yes 21 0.79 Yes -21 0.73 Yes 49 71.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54894326 + NM_001184976 NCKAP1L 1 0.14 0.63 32 1.44 0 13 4.36 No 39 0.54 No 0 0 No -51 0.81 Yes 19 81.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 54903461 + NM_001184976 NCKAP1L 1 0.04 0.13 7 -0.35 0 12 4.24 No 22 2.13 Yes 0 0 No -35 0.81 Yes 35 75.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 54904128 + NM_001184976 NCKAP1L 1 0.07 0.17 12 -0.47 83 22 6.26 Yes 9 1.24 Yes 25 0.76 Yes -21 0.64 No 49 55.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 54904132 + NM_001184976 NCKAP1L 1 0.61 1.5 52 2.79 0 26 6.57 Yes 13 1.23 Yes 25 0.76 Yes -25 0.69 Yes 45 61.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 54904152 + NM_001184976 NCKAP1L 1 0.16 0.38 19 6.15 84 15 4.51 No 33 1.24 Yes 0 0 No -26 0.36 No 25 49.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 54912379 + NM_001184976 NCKAP1L 1 0.05 0.18 13 2.2 69.16 21 4.77 No 73 1 Yes 20 0.97 Yes -20 0.49 No 50 77.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 54912391 + NM_001184976 NCKAP1L 1 0.08 0.32 20 4.65 0 15 4.58 No 20 1.56 Yes 25 0.9 Yes -22 0.75 Yes 48 86.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 54912727 + NM_001184976 NCKAP1L 1 2.08 6.93 72 3.98 85.41 25 3.67 No 15 -1.73 No 0 0 No -24 0.75 Yes 46 82.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 54917590 + NM_001184976 NCKAP1L 1 0.19 0.51 27 0.84 76.42 16 4.69 No 16 -2.69 No 24 0.93 Yes -21 0.3 No 22 28.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 54924980 + NM_001184976 NCKAP1L 1 0.04 0.13 8 6.01 70.27 58 8.94 Yes 45 1.5 Yes 0 0 No -21 0.48 No 43 61.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 54925277 + NM_001184976 NCKAP1L 1 0.56 1.33 49 -3.41 57.86 55 8.23 Yes 42 1.16 Yes 0 0 No -29 0.67 Yes 16 88.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 54931912 + NM_001184976 NCKAP1L 1 0.06 0.14 8 12.18 94.01 17 5.43 No 4 1.16 Yes 0 0 No -28 0.36 No 42 41.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 50197834 - NM_001037806 NCKAP5L 1 4.97 0.67 32 10.58 92.89 27 6.24 Yes 43 1.47 Yes 0 0 No -55 0.38 No 38 58.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 50197867 - NM_001037806 NCKAP5L 1 0.81 0.11 7 -6.43 74.14 53 7.52 Yes 10 1.48 Yes 25 0.88 Yes -22 0.82 Yes 27 77.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 50210768 - NM_001037806 NCKAP5L 1 3.39 0.42 23 8.58 81.08 36 7.14 Yes 23 1.3 Yes 0 0 No -35 0.78 Yes 35 92.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48716591 - NM_016453 NCKIPSD 1 0.58 0.21 13 2.68 79.69 29 5.74 Yes NA NA NA 27 0.63 Yes -30 0.35 No 44 47.34 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 48720475 - NM_016453 NCKIPSD 1 6.17 1.31 46 10.07 89.87 23 5.39 No 10 1.05 Yes 22 0.89 Yes -22 0.83 Yes 48 87.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48722195 - NM_016453 NCKIPSD 1 1.79 0.4 19 7.36 87.29 24 6.78 Yes 11 1.27 Yes 0 0 No -23 0.91 Yes 47 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 232320000 - NM_005381 NCL 1 0.07 0.56 25 9.04 86.5 14 5.66 Yes 29 0.32 No 25 0.95 Yes -25 0.43 No 45 51.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 232321835 - NM_005381 NCL 1 0.01 0.11 8 -8.19 0 27 5.74 Yes 46 0.79 Yes 0 0 No -26 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 232322069 - NM_005381 NCL 1 0.63 10.03 72 6.73 80 28 6.78 Yes 20 -3.54 No 22 0.87 Yes -22 0.63 No 48 44.59 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 232323056 - NM_005381 NCL 1 0.05 2.04 55 2.52 70.91 19 6.4 Yes 54 0.7 No 0 0 No -18 0.34 No 52 58.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 232323099 - NM_005381 NCL 1 0.01 0.19 12 -8.09 80.88 24 5.92 Yes 11 0.73 No 26 0.45 Yes -23 0.95 Yes 47 94.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 232328024 - NM_005381 NCL 1 0.03 0.63 32 2.83 0 26 5.27 No 13 0.9 Yes 0 0 No -28 0.77 Yes 42 76.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3193632 + NM_020170 NCLN 1 0.1 0.15 11 5.23 85.92 82 9.27 Yes 70 -2.88 No 0 0 No -44 0.49 No 26 75.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 3193652 + NM_020170 NCLN 1 0.17 0.25 14 9.39 79.76 24 5.06 No 49 -1.31 No 0 0 No -22 0.85 Yes 48 89.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3200330 + NM_020170 NCLN 1 0.21 0.28 15 3.97 84.41 26 5.36 No 57 0.95 Yes 0 0 No -25 0.7 Yes 45 78.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3203985 + NM_020170 NCLN 1 0.12 0.19 14 4.64 71.82 29 6.92 Yes NA NA NA 27 0.29 Yes -24 0.68 Yes 42 27.26 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 3205829 + NM_020170 NCLN 1 0.14 0.24 15 7.11 85.05 21 3.92 No 14 1.25 Yes 26 0.89 Yes -26 0.66 No 44 78.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 3206262 + NM_020170 NCLN 1 0.13 0.11 8 4.37 77.32 26 6.32 Yes 13 0.99 Yes 22 0.66 Yes -25 0.63 No 45 52.88 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 3206262 + NM_020170 NCLN 1 63.09 50.18 72 4.37 77.32 26 6.32 Yes 13 0.99 Yes 22 0.66 Yes -25 0.63 No 45 52.88 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 3207368 + NM_020170 NCLN 1 0.27 0.58 29 6.3 82.18 33 6.3 Yes 60 -3.41 No 22 0.89 Yes -32 0.65 No 43 45.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 3207634 + NM_020170 NCLN 1 0.05 0.13 7 -1.36 0 11 4.12 No 19 1.67 Yes 0 0 No -31 0.94 Yes 39 92.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24816538 + NM_147233 NCOA1 1 4.39 3.53 66 10.96 95.74 26 5.92 Yes 25 0.11 No 0 0 No -25 0.8 Yes 45 86.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24887268 + NM_147233 NCOA1 1 0.11 0.13 9 7.15 84.31 32 6.47 Yes 72 0.86 Yes 0 0 No -31 0.71 Yes 39 84.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24896220 + NM_147233 NCOA1 1 0.21 0.21 13 4.85 74.86 12 5.03 No 18 0.41 No 25 0.36 Yes -20 0.54 No 50 55.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 24902928 + NM_147233 NCOA1 1 0.09 0.15 9 5.03 83.43 58 8.66 Yes 45 0.95 Yes 0 0 No -29 0.46 No 45 47.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 24913898 + NM_147233 NCOA1 1 0.48 0.56 29 6.44 88.09 17 4.96 No 39 0.73 No 0 0 No -25 0.92 Yes 45 88.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24914410 + NM_147233 NCOA1 1 0.14 0.13 7 5.49 87.72 28 4.95 No 47 0.41 No 0 0 No -23 0.46 No 50 44.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24914430 + NM_147233 NCOA1 1 0.18 0.18 11 7.14 83.31 14 4.43 No 1 1.52 Yes 0 0 No -27 0.67 Yes 43 73.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24920627 + NM_147233 NCOA1 1 0.12 0.11 8 8.24 91.61 34 4.41 No 71 0.74 No 0 0 No -24 0.5 No 50 59.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24933806 + NM_147233 NCOA1 1 0.1 0.13 9 4.98 0 16 2.89 No 15 1.99 Yes 0 0 No -27 0.85 Yes 43 89.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24952500 + NM_147233 NCOA1 1 0.31 0.31 16 6.78 68.55 35 6.67 Yes 22 1.44 Yes 0 0 No -34 0.93 Yes 36 93.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24954687 + NM_147233 NCOA1 1 0.3 0.24 14 8.33 90.37 30 5.81 Yes 17 0.97 Yes 0 0 No -30 0.65 No 40 77.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 24965515 + NM_147233 NCOA1 1 0.13 0.14 7 9.54 88.27 25 6 Yes 12 1.3 Yes 0 0 No -24 0.89 Yes 46 94.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24980834 + NM_147233 NCOA1 1 0.39 0.44 24 -4.34 69.68 19 4.57 No 68 0.9 Yes 25 0.57 Yes -18 0.56 No 52 55.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 24990947 + NM_147233 NCOA1 1 7.39 0.47 26 7.7 91.79 25 5.08 No 72 1.59 Yes 24 0.55 Yes -19 0.85 Yes 51 88.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24991089 + NM_147233 NCOA1 1 12.39 0.85 40 7.97 87.68 26 6.86 Yes 13 1.07 Yes 25 0.89 Yes -25 0.78 Yes 45 75.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24990947 + NM_147233 NCOA1 1 869.27 51.32 72 7.7 91.79 25 5.08 No 72 1.59 Yes 24 0.55 Yes -19 0.85 Yes 51 88.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 24991089 + NM_147233 NCOA1 1 453.59 27.22 72 7.97 87.68 26 6.86 Yes 13 1.07 Yes 25 0.89 Yes -25 0.78 Yes 45 75.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 71032560 - NM_001321712 NCOA2 1 0.15 0.14 7 0.01 0 20 4.47 No 23 0.05 No 0 0 No -19 0.72 Yes 51 68.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 71044234 - NM_001321712 NCOA2 1 0.18 0.15 8 2.66 0 23 5.83 Yes 40 1.16 Yes 0 0 No -22 0.78 Yes 48 81.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 71057084 - NM_001321712 NCOA2 1 1731.23 87.21 72 8.44 82.25 31 9.47 Yes 18 2.02 Yes 30 0.85 Yes -30 0.89 Yes 40 95.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 71057084 - NM_001321712 NCOA2 1 10.45 0.63 29 8.44 82.25 31 9.47 Yes 18 2.02 Yes 30 0.85 Yes -30 0.89 Yes 40 95.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 71081602 - NM_001321712 NCOA2 1 0.44 0.39 19 9.17 87.55 23 6 Yes 10 1.04 Yes 0 0 No -22 0.88 Yes 48 76.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 71111684 - NM_001321712 NCOA2 1 0.12 0.11 8 4.74 84.41 39 7.68 Yes 26 2.26 Yes 0 0 No -25 0.62 No 32 86.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 71120319 - NM_001321712 NCOA2 1 7.31 5.92 70 10.24 95.65 33 4.99 No 28 0.95 Yes 0 0 No -32 0.72 Yes 38 75.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 71121588 - NM_001321712 NCOA2 1 1.39 1.19 41 8.07 80.9 25 5.72 Yes 12 1.23 Yes 0 0 No -24 0.64 No 46 74.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 71168793 - NM_001321712 NCOA2 1 1.68 0.75 36 9.76 90.96 39 5.32 No 26 0.38 No 0 0 No -23 0.66 No 47 64.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 71176703 - NM_001321712 NCOA2 1 0.93 0.36 21 3.2 87.29 15 5.2 No 2 0.97 Yes 0 0 No -28 0.53 No 42 67.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 71191369 - NM_001321712 NCOA2 1 0.82 0.36 21 6.67 86.17 22 4.69 No 9 0.22 No 0 0 No -24 0.42 No 46 69.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 71207491 - NM_001321712 NCOA2 1 2.76 1.14 48 10.93 92.63 25 9.01 Yes 12 1.37 Yes 0 0 No -24 0.75 Yes 46 74.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 46131124 + NM_001174088 NCOA3 1 2.11 3.63 70 9.6 82.71 30 5.92 Yes 17 1.46 Yes 0 0 No -29 0.88 Yes 41 85.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 46158655 + NM_001174088 NCOA3 1 0.46 0.82 35 7.47 88.09 28 5.46 No 0 1.31 Yes 0 0 No -28 0.81 Yes 42 78.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 46170217 + NM_001174088 NCOA3 1 0.05 0.1 7 13.8 90.98 169 13.82 Yes NA NA NA 0 0 No -25 0.46 No 46 34.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 46196864 + NM_001174088 NCOA3 1 0.15 0.24 14 2.22 86.59 21 5.1 No 27 -1.23 No 0 0 No -26 0.53 No 50 66.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 46207863 + NM_001174088 NCOA3 1 0.13 0.25 14 11.63 82.64 45 5.79 Yes 0 1.8 Yes 0 0 No -29 0.34 No 35 43.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 46213822 + NM_001174088 NCOA3 1 0.19 0.68 32 3.2 0 47 6.82 Yes 34 2.8 Yes 0 0 No -35 0.56 No 35 84.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 46218468 + NM_001174088 NCOA3 1 0.15 0.58 26 6.75 68.96 37 6.4 Yes 37 1.08 Yes 0 0 No -37 0.57 No 33 76.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 46220129 + NM_001174088 NCOA3 1 0.06 0.24 15 1.41 78.22 17 4.5 No 47 0.12 No 0 0 No -17 0.45 No 53 31.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 46223559 + NM_001174088 NCOA3 1 0.32 1.22 45 -12.99 0 29 6.71 Yes 16 1.27 Yes 0 0 No -28 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 46223561 + NM_001174088 NCOA3 1 0.08 0.28 13 2.32 0 31 6.86 Yes 18 1.27 Yes 0 0 No -30 0.87 Yes 40 91.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 46225520 + NM_001174088 NCOA3 1 0.06 0.22 13 3.84 76.66 26 7.12 Yes 13 0.84 Yes 0 0 No -25 0.78 Yes 45 89.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 46234776 + NM_001174088 NCOA3 1 0.13 0.43 27 8.16 86.24 24 8.4 Yes 11 1.94 Yes 0 0 No -23 0.62 No 47 85.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 46241889 + NM_001174088 NCOA3 1 0.12 0.39 18 7.42 82.9 36 5.72 Yes 62 0.33 No 0 0 No -35 0.8 Yes 35 45.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 46242711 + NM_001174088 NCOA3 1 0.98 3.51 69 9.32 87.26 45 8.95 Yes 0 0.38 No 0 0 No -44 0.79 Yes 26 73.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 46252666 + NM_001174088 NCOA3 1 0.19 0.93 44 4.96 0 15 4.58 No 63 1.73 Yes 0 0 No -57 0.53 No 13 53.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 46254178 + NM_001174088 NCOA3 1 0.06 0.22 13 7.45 94.65 25 4.82 No 44 -3.19 No 0 0 No -24 0.89 Yes 46 89.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 46255439 + NM_001174088 NCOA3 1 0.03 0.13 7 6.84 91.75 17 4.78 No 4 0.17 No 0 0 No -26 0.47 No 44 51.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 46257176 + NM_001174088 NCOA3 1 0.75 2.92 68 1.38 83.92 29 6.23 Yes 16 1.37 Yes 28 0.87 Yes -28 0.79 Yes 42 84.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 46257200 + NM_001174088 NCOA3 1 0.13 0.51 26 3.75 84.95 27 5.2 No 40 1.35 Yes 0 0 No -52 0.58 No 18 84.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 46258856 + NM_001174088 NCOA3 1 0.28 1.13 46 4.67 76.5 61 6.87 Yes 48 1.82 Yes 0 0 No -31 0.45 No 39 49.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 46259251 + NM_001174088 NCOA3 1 0.06 0.24 15 3.46 84.95 27 5.2 No 74 -1.49 No 0 0 No -26 0.71 Yes 18 52.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 46264067 + NM_001174088 NCOA3 1 0.06 0.31 16 -4.1 79.76 26 4.09 No 5 0.82 Yes 0 0 No -25 0.58 No 44 57.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 46266959 + NM_001174088 NCOA3 1 0.02 0.1 7 6.2 77.27 38 6.19 Yes 47 0.62 No 0 0 No -37 0.68 Yes 33 81.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 46268320 + NM_001174088 NCOA3 1 1001.09 231.38 72 5.65 78.91 21 5.2 No 8 0.1 No 20 0.84 Yes -20 0.81 Yes 50 80.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 46268368 + NM_001174088 NCOA3 1 0.75 0.13 9 -10.13 75.13 23 4.92 No 10 1.12 Yes 0 0 No -22 0.58 No 48 57.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 46268640 + NM_001174088 NCOA3 1 0.24 0.44 27 3.78 78.18 20 5.65 Yes 59 0.72 No 30 0.66 Yes -25 0.88 Yes 45 81.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 46268659 + NM_001174088 NCOA3 1 0.09 0.17 10 0.62 0 27 4.88 No 26 0.38 No 30 0.66 Yes -21 0.66 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 46276306 + NM_001174088 NCOA3 1 0.06 0.13 7 7.54 95.32 23 3.62 No 53 0.11 No 0 0 No -22 0.79 Yes 48 84.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 46277253 + NM_001174088 NCOA3 1 0.16 0.39 21 8.94 97.35 37 5.12 No 70 1.14 Yes 0 0 No -26 0.5 No 44 56.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 46277760 + NM_001174088 NCOA3 1 0.33 0.78 38 3.07 0 20 4.57 No 41 1.98 Yes 0 0 No -19 0.86 Yes 38 84.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 46279728 + NM_001174088 NCOA3 1 52.93 26.01 72 3.78 80.45 28 7.48 Yes 15 0.53 No 0 0 No -27 0.73 Yes 43 67.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 46280891 + NM_001174088 NCOA3 1 0.84 2.5 63 6.94 93.74 23 4.8 No 55 1.15 Yes 0 0 No -22 0.79 Yes 48 78.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 51580891 + NM_001145262 NCOA4 1 0.08 0.43 20 2.02 0 15 3.63 No 61 0.47 No 0 0 No -35 0.63 No 35 67.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 51582798 + NM_001145262 NCOA4 1 0.14 0.46 24 -2.46 57.18 29 8.72 Yes 34 0.83 Yes 0 0 No -28 0.66 No 37 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 51586274 + NM_001145262 NCOA4 1 0.18 0.82 38 -4.4 0 34 4.84 No 40 1.5 Yes 0 0 No -29 0.48 No 34 56.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 51586609 + NM_001145262 NCOA4 1 0.03 0.15 10 4.99 71.73 38 5.83 Yes 25 0.68 No 27 0.81 Yes -27 0.79 Yes 43 71.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 51587374 + NM_001145262 NCOA4 1 0.06 0.29 16 4.79 74.51 37 7.55 Yes 24 1.65 Yes 0 0 No -36 0.79 Yes 34 94.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44695819 - NM_001348149 NCOA5 1 0.17 0.24 13 -7.54 67.38 33 4.35 No 68 1.21 Yes 0 0 No -32 0.7 Yes 38 92.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44704676 - NM_001348149 NCOA5 1 0.17 0.15 9 1.9 0 17 3.96 No 37 1.06 Yes 0 0 No -28 0.56 No 42 76.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 44704697 - NM_001348149 NCOA5 1 0.24 0.21 12 5.2 68.77 29 6.75 Yes 16 1.06 Yes 0 0 No -28 0.65 No 42 64.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 44707747 - NM_001348149 NCOA5 1 0.13 0.11 8 9.7 84.13 20 5.66 Yes 7 0.48 No 0 0 No -28 0.63 No 42 60.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 44708125 - NM_001348149 NCOA5 1 0.38 0.18 10 8.54 83.39 24 7.88 Yes 11 1.5 Yes 27 0.6 Yes -23 0.79 Yes 47 94.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 33312472 - NM_001318240 NCOA6 1 0.16 0.1 7 9.42 91.71 23 5.39 No 10 0.57 No 0 0 No -22 0.79 Yes 48 85.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33315209 - NM_001318240 NCOA6 1 7.98 4.21 70 6.52 80.53 38 8.48 Yes 25 1.32 Yes 0 0 No -37 0.84 Yes 33 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33326737 - NM_001318240 NCOA6 1 2.06 0.97 43 7.09 89.91 27 5.36 No 14 0.56 No 0 0 No -26 0.72 Yes 44 81.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33336607 - NM_001318240 NCOA6 1 1.33 0.64 29 6.75 96.31 26 5.29 No 31 0.33 No 0 0 No -25 0.91 Yes 45 90.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33342636 - NM_001318240 NCOA6 1 24.59 6.21 71 6.14 86.32 28 6.56 Yes 52 1.54 Yes 0 0 No -27 0.72 Yes 43 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33342639 - NM_001318240 NCOA6 1 27.04 6.88 72 4.6 77.75 25 6.34 Yes 49 1.54 Yes 0 0 No -24 0.71 Yes 46 73.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33342989 - NM_001318240 NCOA6 1 1.3 0.29 18 3.28 83.7 33 4.92 No 16 0.08 No 0 0 No -28 0.54 No 42 67.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33344424 - NM_001318240 NCOA6 1 0.51 0.14 7 5.94 81.61 29 5.5 No 63 0.53 No 0 0 No -28 0.74 Yes 42 68.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 33346752 - NM_001318240 NCOA6 1 2.83 1.26 50 7.08 80.58 21 4.69 No 49 0.06 No 22 0.49 Yes -21 0.59 No 50 61.96 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 33350618 - NM_001318240 NCOA6 1 2.64 1.08 47 1.43 83.25 21 5 No 8 0.4 No 0 0 No -20 0.85 Yes 50 90.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33352918 - NM_001318240 NCOA6 1 0.35 0.15 10 6.81 82.1 37 6.01 Yes 24 0.93 Yes 0 0 No -36 0.89 Yes 34 95.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33370205 - NM_001318240 NCOA6 1 1.07 0.42 23 1.69 76.22 31 8.84 Yes 18 1.65 Yes 0 0 No -30 0.66 No 40 68.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 33377870 - NM_001318240 NCOA6 1 1.89 0.71 30 4.68 81.85 27 6.02 Yes 14 0.67 No 0 0 No -27 0.66 No 43 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 33377873 - NM_001318240 NCOA6 1 1.52 0.51 27 7.22 84.58 24 5.81 Yes 11 0.7 No 0 0 No -24 0.65 No 46 73.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 126179967 + NM_001199619 NCOA7 1 1.21 1.18 44 8.04 90.65 31 4.81 No 48 1.06 Yes 0 0 No -20 0.53 No 50 63.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 126210117 + NM_001199619 NCOA7 1 31.42 18.22 72 8.35 91.66 23 5.25 No 19 1.05 Yes 22 0.82 Yes -27 0.64 No 43 78.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 126211767 + NM_001199619 NCOA7 1 0.34 0.29 16 -4.61 0 16 3.49 No 36 -1.65 No 25 0.72 Yes -30 0.4 No 40 60.77 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 126214208 + NM_001199619 NCOA7 1 0.46 0.22 15 3.35 78.89 42 6.62 Yes 53 0.7 No 0 0 No -31 0.62 No 39 87.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 126220505 + NM_001199619 NCOA7 1 0.52 0.26 15 0.92 71.46 35 5.46 No 74 1.97 Yes 0 0 No -34 0.74 Yes 36 76.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 126234771 + NM_001199619 NCOA7 1 4.09 2.11 60 7.78 77.23 19 7.21 Yes 6 1.36 Yes 0 0 No -18 0.55 No 52 72.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 15943806 - NM_001190440 NCOR1 1 1.73 2.18 60 0.84 71.45 28 7.87 Yes 15 0.58 No 24 0.76 Yes -27 0.58 No 43 51.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 15952300 - NM_001190440 NCOR1 1 3.48 5.13 72 1.8 72.29 25 6.53 Yes 62 0.45 No 21 0.66 Yes -24 0.89 Yes 46 66.48 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 15957823 - NM_001190440 NCOR1 1 0.09 0.14 9 6.13 92.9 46 6.79 Yes 33 1.29 Yes 0 0 No -32 0.65 No 38 74.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 15960974 - NM_001190440 NCOR1 1 0.25 0.39 21 6.96 88.1 16 4.45 No 60 -0.96 No 0 0 No -23 0.79 Yes 47 88.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 15967517 - NM_001190440 NCOR1 1 0.32 0.4 23 3.56 0 16 3.75 No 11 0.58 No 23 0.88 Yes -32 0.92 Yes 38 86.63 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 15968295 - NM_001190440 NCOR1 1 2.14 3.1 71 7.02 65.68 26 5.58 Yes 61 0.17 No 0 0 No -25 0.55 No 45 85.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 15969006 - NM_001190440 NCOR1 1 2.91 4.57 71 5.18 77.93 32 6.16 Yes 19 0.97 Yes 28 0.89 Yes -31 0.95 Yes 39 96.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 15969006 - NM_001190440 NCOR1 1 0.15 0.24 15 5.18 77.93 32 6.16 Yes 19 0.97 Yes 28 0.89 Yes -31 0.95 Yes 39 96.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 15973613 - NM_001190440 NCOR1 1 0.19 0.36 19 12.23 79.5 24 5.4 No 11 1.02 Yes 0 0 No -23 0.77 Yes 47 66.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 15983370 - NM_001190440 NCOR1 1 0.1 0.18 12 -1.69 0 12 4.24 No 17 1.28 Yes 0 0 No -29 0.87 Yes 41 91.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 15990660 - NM_001190440 NCOR1 1 29.03 30.76 72 6.51 85.55 53 8.41 Yes 4 1 Yes 25 0.81 Yes -25 0.68 Yes 45 85.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 15993767 - NM_001190440 NCOR1 1 0.51 0.5 21 8.93 91.43 32 5.7 Yes 24 0.32 No 0 0 No -31 0.5 No 39 61.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 16005072 - NM_001190440 NCOR1 1 9.82 16.72 72 8.37 85.04 19 4.94 No 18 1.04 Yes 26 0.67 Yes -30 0.76 Yes 40 70.15 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 16005114 - NM_001190440 NCOR1 1 0.09 0.14 10 0.72 0 16 3.85 No 40 0.57 No 26 0.67 Yes -28 0.7 Yes 42 75.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 16009742 - NM_001190440 NCOR1 1 1.19 1.99 51 10.71 91.79 23 5.17 No 58 0.13 No 0 0 No -23 0.88 Yes 47 91.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 16019726 - NM_001190440 NCOR1 1 0.17 0.25 13 9.44 89.13 30 5.45 No 17 1.73 Yes 0 0 No -29 0.75 Yes 41 89.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16023290 - NM_001190440 NCOR1 1 0.11 0.14 9 6.3 82.65 38 6.63 Yes 33 1.48 Yes 0 0 No -37 0.89 Yes 33 96.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16029524 - NM_001190440 NCOR1 1 67.52 57.74 72 3.27 72.34 52 7.23 Yes 2 0.56 No 21 0.5 Yes -21 0.69 Yes 49 56.94 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 16041896 - NM_001190440 NCOR1 1 0.08 0.17 10 4.2 82.75 33 5.74 Yes 60 0.39 No 0 0 No -28 0.39 No 42 79.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 16054931 - NM_001190440 NCOR1 1 38.18 56.57 72 9.99 91.11 34 6.26 Yes 34 0.71 No 33 0.75 Yes -33 0.66 No 37 58.67 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 16056708 - NM_001190440 NCOR1 1 0.07 0.14 9 -12.33 0 47 6.39 Yes 57 0.55 No 0 0 No -22 0.55 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 16056709 - NM_001190440 NCOR1 1 0.09 0.18 12 -11.43 0 46 6.34 Yes 56 0.56 No 0 0 No -21 0.45 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 16062182 - NM_001190440 NCOR1 1 0.37 0.39 22 -1.84 0 9 3.87 No 18 1.4 Yes 0 0 No -30 0.85 Yes 40 91.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16075192 - NM_001190440 NCOR1 1 0.19 0.25 16 10.64 87.68 15 5.48 No 2 1.43 Yes 0 0 No -26 0.83 Yes 44 82.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16075335 - NM_001190440 NCOR1 1 0.69 0.86 41 4.03 65.56 14 5.6 Yes 63 1.07 Yes 22 0.4 Yes -20 0.53 No 50 56.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 16077214 - NM_001190440 NCOR1 1 0.32 0.43 18 10.35 93.38 32 5.66 Yes 41 0.15 No 0 0 No -56 0.43 No 14 72.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 124817011 - NM_001077261 NCOR2 1 11.76 13.85 72 5.84 79.39 28 5.38 No 15 0.95 Yes 24 0.94 Yes -27 0.83 Yes 43 91.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124825241 - NM_001077261 NCOR2 1 0.34 0.44 24 3.38 73.89 39 4.66 No 40 -1.1 No 30 0.3 Yes -30 0.67 Yes 38 56.53 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 124826741 - NM_001077261 NCOR2 1 0.21 0.22 13 4.8 77.74 25 5.11 No 36 1.12 Yes 0 0 No -24 0.91 Yes 46 90.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124827769 - NM_001077261 NCOR2 1 0.19 0.28 19 0.78 0 30 6.44 Yes 53 -1.54 No 0 0 No -25 0.78 Yes 45 57.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 124839558 - NM_001077261 NCOR2 1 0.19 0.38 20 7.01 84.57 26 6.32 Yes 13 1.43 Yes 0 0 No -25 0.81 Yes 45 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124839779 - NM_001077261 NCOR2 1 0.14 0.25 13 4.7 81.17 15 6.34 Yes 52 0.52 No 0 0 No -36 0.94 Yes 34 95.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124841329 - NM_001077261 NCOR2 1 30.49 7.13 71 4.48 87.96 19 3.64 No 35 2.07 Yes 26 0.83 Yes -26 0.74 Yes 44 73.4 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124841350 - NM_001077261 NCOR2 1 61.13 14.53 72 5.97 81.35 27 6.32 Yes 14 2.06 Yes 26 0.83 Yes -26 0.95 Yes 44 92.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124846841 - NM_001077261 NCOR2 1 51.98 15.46 72 9.24 88.91 25 7.07 Yes 47 2.43 Yes 21 0.87 Yes -24 0.94 Yes 46 87.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124859010 - NM_001077261 NCOR2 1 81.96 67.1 72 7.76 86.54 24 8.94 Yes 11 2.27 Yes 23 0.89 Yes -23 0.74 Yes 47 87.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124862925 - NM_001077261 NCOR2 1 0.17 0.26 14 -7.81 0 9 3.87 No 18 1.5 Yes 0 0 No -30 0.89 Yes 40 86.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124880959 - NM_001077261 NCOR2 1 0.13 0.19 14 7.07 85.2 40 7.93 Yes 27 0.87 Yes 0 0 No -39 0.56 No 30 63.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 124881253 - NM_001077261 NCOR2 1 0.09 0.14 10 10.81 79.76 29 6.93 Yes 16 1.52 Yes 0 0 No -28 0.95 Yes 42 91.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124887102 - NM_001077261 NCOR2 1 0.32 0.28 14 -7.46 0 11 3.87 No 45 1.49 Yes 0 0 No -57 0.91 Yes 13 89.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124887105 - NM_001077261 NCOR2 1 25.48 22.25 72 0.02 67.38 63 6.94 Yes 42 1.5 Yes 0 0 No -54 0.9 Yes 16 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124909913 - NM_001077261 NCOR2 1 0.11 0.28 15 3.1 0 45 6.64 Yes 32 0.85 Yes 0 0 No -44 0.95 Yes 26 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124909917 - NM_001077261 NCOR2 1 0.15 0.35 19 8.91 83.29 41 6.36 Yes 28 0.87 Yes 0 0 No -40 0.95 Yes 30 94.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124914253 - NM_001077261 NCOR2 1 825.38 109.75 72 7.81 81.65 23 5.39 No 10 1.11 Yes 22 0.92 Yes -22 0.93 Yes 48 90.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 124915328 - NM_001077261 NCOR2 1 0.92 1.86 59 -2.95 0 9 3.87 No 65 -2.15 No 0 0 No -28 0.8 Yes 42 85.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124915331 - NM_001077261 NCOR2 1 0.14 0.29 17 -6.63 69.82 22 5.53 No 62 -2.14 No 0 0 No -25 0.8 Yes 45 85.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124918099 - NM_001077261 NCOR2 1 0.07 0.17 10 8.34 81.75 27 5.39 No 72 -1.22 No 0 0 No -26 0.46 No 44 51.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 124922616 - NM_001077261 NCOR2 1 0.13 0.26 14 1.45 73 29 6.7 Yes -4 0.72 No 0 0 No -28 0.64 No 42 56.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 124932031 - NM_001077261 NCOR2 1 1.3 2.69 62 7.98 82.54 21 5.62 Yes 58 0.67 No 0 0 No -25 0.48 No 45 60.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 124939574 - NM_001077261 NCOR2 1 0.22 0.46 25 6.3 86.3 104 10.23 Yes 38 -0.74 No 0 0 No -34 0.72 Yes 36 75.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124941159 - NM_001077261 NCOR2 1 0.05 0.13 8 2.66 73.5 27 5.57 Yes 72 1.56 Yes 0 0 No -26 0.87 Yes 44 91.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124941706 - NM_001077261 NCOR2 1 0.2 0.26 14 -6.54 65.51 59 8.41 Yes 46 0.83 Yes 0 0 No -58 0.44 No 12 52.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 124950827 - NM_001077261 NCOR2 1 0.27 0.43 25 -1.3 0 11 3.87 No 15 1.87 Yes 0 0 No -34 0.67 Yes 36 68.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 124956713 - NM_001077261 NCOR2 1 0.12 0.17 11 7.54 83.34 27 6.4 Yes 36 0.95 Yes 0 0 No -26 0.92 Yes 44 91.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124957354 - NM_001077261 NCOR2 1 0.15 0.25 16 5.54 84.61 35 7.48 Yes 22 1.57 Yes 0 0 No -34 0.87 Yes 36 96.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124961311 - NM_001077261 NCOR2 1 0.14 0.24 15 8.01 87.85 47 7.39 Yes 73 0.71 No 0 0 No -24 0.7 Yes 46 75.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124997049 - NM_001077261 NCOR2 1 0.65 0.29 18 1.62 0 19 3.67 No 38 1.63 Yes 0 0 No -18 0.91 Yes 52 81.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 125007144 - NM_001077261 NCOR2 1 0.28 0.14 10 6.55 85.3 25 7.36 Yes 12 1.1 Yes 0 0 No -24 0.84 Yes 46 78.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 125034871 - NM_001077261 NCOR2 1 0.44 0.14 8 10.81 83.2 30 6 Yes 17 0.15 No 0 0 No -29 0.87 Yes 41 93.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160321077 + NM_001290184 NCSTN 1 2.41 4.68 71 5.72 79 32 4.73 No 19 0.67 No 31 0.85 Yes -31 0.59 No 39 72.12 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 160321915 + NM_001290184 NCSTN 1 0.15 0.24 14 5.64 84.48 30 5.39 No 17 0.32 No 29 0.75 Yes -22 0.52 No 48 66.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 160322699 + NM_001290184 NCSTN 1 0.07 0.11 7 3.68 70.47 26 5.63 Yes 58 1.96 Yes 0 0 No -25 0.9 Yes 45 82.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160323112 + NM_001290184 NCSTN 1 2.11 3.26 68 9.13 77.74 30 5.52 No 70 1.42 Yes 30 0.6 Yes -29 0.57 No 41 60.19 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 160324012 + NM_001290184 NCSTN 1 0.21 0.33 21 10.09 86.45 33 5.69 Yes 20 0.1 No 0 0 No -26 0.7 Yes 44 76.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160325421 + NM_001290184 NCSTN 1 0.09 0.15 9 -5.04 0 13 5.48 No 0 0.04 No 19 0.85 Yes -11 0.48 No 58 44.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 160326426 + NM_001290184 NCSTN 1 0.05 0.1 7 5.47 80.47 35 5.8 Yes 74 0.83 Yes 0 0 No -22 0.78 Yes 36 58.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 160326854 + NM_001290184 NCSTN 1 0.13 0.19 14 2.21 76.9 18 4.68 No -2 0.29 No 0 0 No -55 0.41 No 60 52.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160326918 + NM_001290184 NCSTN 1 0.54 0.82 39 -0.73 62.04 49 7.16 Yes 36 0.79 Yes 0 0 No -48 0.54 No 22 38.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 54233736 - NR_033142 NDC1 1 0.18 0.22 13 -0.72 54.08 86 7.82 Yes 53 0.49 No 0 0 No -27 0.55 No 43 59.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 54237639 - NR_033142 NDC1 1 0.22 0.28 17 2.1 77.2 25 6.67 Yes 12 1.19 Yes 0 0 No -30 0.45 No 46 60.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 54254092 - NR_033142 NDC1 1 0.1 0.17 7 7.78 92.63 26 6.91 Yes 35 0.19 No 0 0 No -25 0.91 Yes 45 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 54257106 - NR_033142 NDC1 1 1.14 1.22 40 11.28 95.65 24 6.58 Yes 11 1.06 Yes 0 0 No -26 0.61 No 44 72.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 54257496 - NR_033142 NDC1 1 0.13 0.17 11 11.15 88.9 30 5.97 Yes 31 1.49 Yes 0 0 No -29 0.66 Yes 41 55.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 54262429 - NR_033142 NDC1 1 0.51 0.93 41 5.48 75.24 39 6.02 Yes 13 1.76 Yes 0 0 No -25 0.62 No 45 58.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 54262815 - NR_033142 NDC1 1 0.25 0.64 30 -0.72 76.4 28 5.83 Yes 56 -1.88 No 0 0 No -27 0.92 Yes 43 90.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 54275441 - NR_033142 NDC1 1 0.13 0.25 13 6.5 82.94 32 5.6 Yes 43 1.79 Yes 25 0.87 Yes -31 0.66 No 39 74.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 54284087 - NR_033142 NDC1 1 0.12 0.19 10 4.66 81.17 43 7.23 Yes 22 0.86 Yes 0 0 No -42 0.45 No 28 57.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 54293727 - NR_033142 NDC1 1 2.11 4.56 69 4.93 76.85 56 8.12 Yes 43 1.08 Yes 0 0 No -19 0.48 No 15 59.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 54293822 - NR_033142 NDC1 1 0.15 0.32 21 7.68 87.89 15 5.83 Yes 30 1.42 Yes 0 0 No -27 0.65 No 43 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 54293866 - NR_033142 NDC1 1 0.22 0.46 24 -6.46 0 13 3.72 No 0 -1.89 No 23 0.49 Yes -31 0.65 No 39 64.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 54297469 - NR_033142 NDC1 1 0.29 0.67 28 11.63 90.46 40 7.33 Yes 27 0.95 Yes 0 0 No -39 0.67 Yes 31 58.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 2573378 + NM_006101 NDC80 1 0.09 0.13 8 9.72 84.81 21 5.93 Yes 29 0.97 Yes 0 0 No -31 0.61 No 42 67.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 2577234 + NM_006101 NDC80 1 0.21 0.25 15 4.74 84.41 34 6.93 Yes 21 1.77 Yes 33 0.87 Yes -33 0.85 Yes 37 88.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 2577977 + NM_006101 NDC80 1 0.26 0.38 23 3.64 0 18 4.36 No 69 0.71 No 0 0 No -26 0.76 Yes 44 93.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2578436 + NM_006101 NDC80 1 0.1 0.14 7 2.17 63.24 40 7.41 Yes 27 0.04 No 0 0 No -39 0.33 No 31 34.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 2582100 + NM_006101 NDC80 1 0.26 0.33 20 6.73 82.41 84 7.83 Yes 71 0.58 No 29 0.03 Yes -57 0.78 Yes 13 70.61 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 2585172 + NM_006101 NDC80 1 0.1 0.14 8 -9.75 57.1 22 4.69 No 23 1.44 Yes 0 0 No -35 0.84 Yes 35 39.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 2595372 + NM_006101 NDC80 1 0.09 0.14 7 10.56 89.91 22 6.31 Yes 9 0.33 No 29 0.56 Yes -24 0.87 Yes 46 88.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 2608644 + NM_006101 NDC80 1 0.23 0.33 19 4.8 69 34 4.15 No 31 0.81 Yes 0 0 No -38 0.46 No 36 80.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 2613376 + NM_006101 NDC80 1 0.36 0.31 16 8.38 83.82 30 6.87 Yes 17 1.05 Yes 0 0 No -29 0.95 Yes 41 94.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 2614952 + NM_006101 NDC80 1 0.19 0.17 10 0.65 73.85 24 4.48 No 23 0.99 Yes 23 0.88 Yes -23 0.85 Yes 47 89.71 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15745325 + NM_017668 NDE1 1 0.22 0.31 16 1.86 0 60 6.47 Yes 47 0.43 No 44 0.4 Yes -44 0.71 Yes 26 72.28 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15745787 + NM_017668 NDE1 1 7.05 9.28 72 0.22 83.28 28 4.6 No 50 1 Yes 27 0.83 Yes -27 0.87 Yes 43 85.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15745809 + NM_017668 NDE1 1 15.48 20.24 72 5.25 96.22 25 5 No 72 1 Yes 0 0 No -49 0.49 No 21 68.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 15761147 + NM_017668 NDE1 1 0.4 1.61 60 0.46 0 21 7.5 Yes 8 0.65 No 0 0 No -20 0.58 No 38 61.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 15766546 + NM_017668 NDE1 1 0.45 1.51 50 8.95 91.75 21 4.56 No 70 1.18 Yes 24 0.86 Yes -24 0.74 Yes 49 74.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15768101 + NM_017668 NDE1 1 0.15 0.54 28 10.21 75.13 82 9.1 Yes 69 1.94 Yes 0 0 No -25 0.62 No 45 82.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 15771660 + NM_017668 NDE1 1 2.96 9.9 72 -8.4 76.21 29 5.4 No 12 1.08 Yes 0 0 No -28 0.68 Yes 42 77.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15785666 + NM_017668 NDE1 1 0.83 1.96 55 9.05 89.74 16 5.63 Yes 3 1.76 Yes 0 0 No -29 0.62 No 41 70.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 15789764 + NM_017668 NDE1 1 1.5 3.14 65 5.97 86.67 25 6.15 Yes 12 0.75 No 24 0.92 Yes -24 0.95 Yes 46 97.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8347244 + NM_001025579 NDEL1 1 2.31 1.38 44 7.53 81.05 34 5.81 Yes 21 1.26 Yes 33 0.74 Yes -33 0.81 Yes 37 90.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8348271 + NM_001025579 NDEL1 1 3.59 3.99 70 7.28 83.67 70 7.28 Yes 14 0.9 Yes 26 0.83 Yes -26 0.84 Yes 44 82.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8363399 + NM_001025579 NDEL1 1 0.11 0.13 8 5.91 87.14 21 5.74 Yes 56 -4.74 No 0 0 No -20 0.75 Yes 50 83.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 80080302 + NM_019080 NDFIP2 1 0.1 0.11 7 10.97 83.75 14 6.16 Yes 53 0.77 No 0 0 No -27 0.63 No 43 72.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 80107463 + NM_019080 NDFIP2 1 0.36 0.58 30 0.18 0 9 3.87 No 8 0.16 No 0 0 No -37 0.6 No 33 75.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 80115998 + NM_019080 NDFIP2 1 0.19 0.19 10 11.64 92.11 24 7.42 Yes 11 0.97 Yes 0 0 No -24 0.63 No 46 86.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 80117752 + NM_019080 NDFIP2 1 0.35 0.36 22 3.03 61.28 53 7.89 Yes 40 -1.48 No 26 0.73 Yes -46 0.61 No 24 64.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 140100732 + NM_001144026 NDOR1 1 7.66 3.81 68 5.26 84.85 37 5.78 Yes 61 0.98 Yes 0 0 No -36 0.76 Yes 48 55.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 140108821 + NM_001144026 NDOR1 1 0.33 0.15 8 11.12 88.48 22 5.63 Yes 9 1.1 Yes 0 0 No -21 0.95 Yes 49 93.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140108821 + NM_001144026 NDOR1 1 2.77 1.24 46 11.12 88.48 22 5.63 Yes 9 1.1 Yes 0 0 No -21 0.95 Yes 49 93.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140108998 + NM_001144026 NDOR1 1 0.67 0.31 17 9.98 74.86 46 7.18 Yes 33 0.79 Yes 27 0.57 Yes -26 0.61 No 44 67.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 140109268 + NM_001144026 NDOR1 1 0.41 0.22 16 -1.06 76.21 29 5.29 No 16 1.4 Yes 0 0 No -28 0.97 Yes 42 93.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140109571 + NM_001144026 NDOR1 1 0.16 0.1 7 7.27 79.45 16 5.83 Yes 30 1.12 Yes 0 0 No -27 0.61 No 43 57.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 140109748 + NM_001144026 NDOR1 1 0.27 0.13 9 5.87 82.59 24 5.2 No 11 0.08 No 0 0 No -24 0.65 No 47 60.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140109763 + NM_001144026 NDOR1 1 0.51 0.22 12 4.38 77.6 21 4.26 No 8 1.54 Yes 0 0 No -20 0.94 Yes 50 94.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140109879 + NM_001144026 NDOR1 1 2.14 1 45 7.36 78.4 18 5.48 No -2 0.81 Yes 23 0.52 Yes -17 0.41 No 53 42.76 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 140110778 + NM_001144026 NDOR1 1 1.49 0.56 30 8.62 91.87 16 5.39 No 3 1.83 Yes 0 0 No -23 0.54 No 47 41.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 35282127 - NM_032013 NDRG3 1 0.88 0.46 25 7.71 79 21 6.14 Yes 8 1.23 Yes 24 0.43 Yes -21 0.6 No 50 62.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 149907056 + NM_001543 NDST1 1 0.88 0.36 20 5.93 71.3 31 5.36 No 18 0.49 No 0 0 No -30 0.89 Yes 40 81.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 149912524 + NM_001543 NDST1 1 0.43 0.19 12 3.76 80.89 21 5.01 No 36 2.04 Yes 0 0 No -48 0.78 Yes 26 82.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149932074 + NM_001543 NDST1 1 0.16 0.13 9 2.95 0 66 7.08 Yes 53 1.13 Yes 0 0 No -49 0.61 No 21 67.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75563067 - NM_001330107 NDST2 1 0.28 0.17 8 6.81 85.05 19 5.92 Yes 63 1.48 Yes 0 0 No -18 0.44 No 52 60.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75563471 - NM_001330107 NDST2 1 1.34 0.57 31 6.66 78.06 46 6.43 Yes 70 0.48 No 0 0 No -32 0.83 Yes 38 94.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 75564658 - NM_001330107 NDST2 1 0.15 0.11 8 -1.81 43.59 20 6.22 Yes 52 -2.27 No 0 0 No -19 0.69 Yes 51 44.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 75566158 - NM_001330107 NDST2 1 1.26 0.65 34 6.39 74.27 33 7.55 Yes NA NA NA 0 0 No -29 0.68 Yes 41 67.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 75566230 - NM_001330107 NDST2 1 0.25 0.13 9 -9.58 66.13 24 5.29 No 46 0.28 No 0 0 No -23 0.61 No 47 44.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 75566262 - NM_001330107 NDST2 1 0.86 0.44 23 4.5 75.4 52 6.97 Yes 76 2.1 Yes 0 0 No -26 0.59 No 44 71.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 75566564 - NM_001330107 NDST2 1 2.05 0.9 41 -5.38 0 11 3.87 No 65 -4.88 No 0 0 No -10 0.68 Yes 49 48.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 75566590 - NM_001330107 NDST2 1 1.33 0.58 31 1.2 69.4 16 5.48 No 3 0.67 No 0 0 No -15 0.78 Yes 55 64.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 119007274 + NM_004541 NDUFA1 1 0.05 0.32 22 -7.8 0 17 3.51 No 36 1.35 Yes 0 0 No -33 0.81 Yes 37 73.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 119007765 + NM_004541 NDUFA1 1 0.12 0.74 34 8.91 78.49 39 7.18 Yes 56 0.75 No 0 0 No -32 0.81 Yes 38 84.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 119009308 + NM_004541 NDUFA1 1 0.06 0.36 18 3.97 84.41 36 6.23 Yes 23 1.92 Yes 0 0 No -35 0.92 Yes 35 95.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 119009332 + NM_004541 NDUFA1 1 0.02 0.11 8 5.43 76.79 27 5.2 No 47 1.9 Yes 0 0 No -59 0.85 Yes 11 93.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 240939805 - NM_001322019 NDUFA10 1 1.31 4.56 70 5.7 73.19 55 8.29 Yes 42 1.08 Yes 0 0 No -38 0.48 No 32 66.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 240942554 - NM_001322019 NDUFA10 1 0.08 0.26 16 0 0 25 5.02 No 12 0.31 No 0 0 No -24 0.83 Yes 46 78.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 240942558 - NM_001322019 NDUFA10 1 0.05 0.18 10 2.86 86.99 21 4.65 No 8 0.32 No 0 0 No -20 0.8 Yes 50 79.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 240945259 - NM_001322019 NDUFA10 1 0.06 0.26 15 7.44 88.52 20 6.28 Yes 7 1.94 Yes 0 0 No -28 0.9 Yes 42 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 240948378 - NM_001322019 NDUFA10 1 0.13 0.32 15 9.71 87.17 30 6.59 Yes 17 2.15 Yes 0 0 No -24 0.5 No 46 57.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 240951078 - NM_001322019 NDUFA10 1 0.11 0.31 17 10.73 89.4 25 4.45 No 60 1.48 Yes 22 0.46 Yes -24 0.67 Yes 46 56.3 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 5896662 - NM_001193375 NDUFA11 1 1.39 10.86 72 8.66 87.37 26 6.08 Yes NA NA NA 0 0 No -25 0.58 No 49 62.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 5896819 - NM_001193375 NDUFA11 1 0.02 0.14 9 8.72 82.18 30 6.78 Yes -3 2.06 Yes 0 0 No -29 0.94 Yes 41 90.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5901466 - NM_001193375 NDUFA11 1 0.54 4.38 70 11.8 94.1 34 5.68 Yes 58 1.1 Yes 22 0.82 Yes -22 0.65 No 48 57.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 5901493 - NM_001193375 NDUFA11 1 0.03 0.28 14 -9.47 0 13 4.03 No 31 1.09 Yes 22 0.82 Yes -43 0.55 No 27 64.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 5902651 - NM_001193375 NDUFA11 1 0.05 0.36 20 6.25 85.83 28 4.26 No 44 1.02 Yes 27 0.94 Yes -27 0.91 Yes 43 88.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 95365262 - NM_018838 NDUFA12 1 0.05 0.33 17 6.29 76.81 25 5.87 Yes 71 0.37 No 25 0.36 Yes -25 0.55 No 48 45.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 95368062 - NM_018838 NDUFA12 1 0.35 2.17 60 6.35 82.27 15 5.03 No 16 0.17 No 0 0 No -28 0.62 No 42 55.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 95385749 - NM_018838 NDUFA12 1 0.1 0.65 34 3.42 77.1 30 5.55 No 12 0.65 No 0 0 No -24 0.82 Yes 46 63.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 95388067 - NM_018838 NDUFA12 1 0.02 0.1 7 -1.7 51.53 53 6.11 Yes 19 0.04 No 21 0.47 Yes -26 0.47 No 18 53.21 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 95390753 - NM_018838 NDUFA12 1 0.1 0.56 28 7.14 84.26 19 5.83 Yes 6 0.51 No 30 0.72 Yes -30 0.64 No 40 81.74 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 95391187 - NM_018838 NDUFA12 1 0.31 1.69 52 2.47 72.92 16 4.87 No 58 -2.32 No 0 0 No -23 0.82 Yes 47 80.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 95396968 - NM_018838 NDUFA12 1 0.03 0.13 7 2.82 66.98 46 4.95 No 30 0.93 Yes 0 0 No -46 0.28 No 22 54.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19636833 + NM_015965 NDUFA13 1 0.02 0.19 10 7.35 89.51 29 5.92 Yes 16 0.55 No 0 0 No -28 0.7 Yes 42 80.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19636997 + NM_015965 NDUFA13 1 0.04 0.4 22 -3.1 0 12 4 No 15 1.2 Yes 0 0 No -27 0.79 Yes 43 78.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19637240 + NM_015965 NDUFA13 1 0.03 0.38 23 7.39 84.31 18 4.58 No 65 -3.01 No 0 0 No -21 0.63 No 49 51.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 140025304 - NM_002488 NDUFA2 1 0.06 0.43 25 1.69 0 17 4 No 57 0.83 Yes 26 0.75 Yes -35 0.49 No 35 51.39 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 140025311 - NM_002488 NDUFA2 1 9.26 60.81 72 5.49 82.17 32 5.57 Yes 50 0.84 Yes 26 0.35 Yes -28 0.53 No 42 50.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 140026977 - NM_002488 NDUFA2 1 0.23 1.06 48 0.55 75.06 21 4.69 No 32 0.33 No 28 0.43 Yes -20 0.81 Yes 50 65.59 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 54608903 + NM_004542 NDUFA3 1 0.43 1.75 59 6.22 89.93 20 4.9 No 7 1.11 Yes 19 0.84 Yes -19 0.72 Yes 51 88.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 54608908 + NM_004542 NDUFA3 1 0.04 0.18 9 2.16 0 25 5.39 No 12 1.11 Yes 0 0 No -24 0.78 Yes 46 92.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 54609199 + NM_004542 NDUFA3 1 0.05 0.22 14 11.99 85.84 24 6 Yes 11 2 Yes 20 0.92 Yes -23 0.96 Yes 47 95.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 54609659 + NM_004542 NDUFA3 1 1.81 10.21 71 6.57 81.31 29 6.87 Yes 68 0.82 Yes 22 0.53 Yes -26 0.41 No 44 73.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 54609662 + NM_004542 NDUFA3 1 0.55 3.06 65 3.54 86.29 32 7.06 Yes 71 0.81 Yes 0 0 No -23 0.36 No 41 65.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 54610070 + NM_004542 NDUFA3 1 0.7 3.82 68 6.01 93.35 23 4.69 No 62 2.46 Yes 22 0.65 Yes -20 0.53 No 48 64.69 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 10973310 - NM_002489 NDUFA4 1 0.01 0.21 12 0.28 0 13 4.27 No 60 0.57 No 0 0 No -35 0.91 Yes 35 92.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 10973577 - NM_002489 NDUFA4 1 0.01 0.17 10 6.78 89.62 19 4.49 No 24 0.23 No 0 0 No -19 0.38 No 51 37.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 10973764 - NM_002489 NDUFA4 1 0.02 0.29 20 9.75 99.29 22 5 No 72 -3.98 No 0 0 No -21 0.49 No 44 64.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 10977798 - NM_002489 NDUFA4 1 0.02 0.38 21 4.32 80.05 25 5.29 No 12 0.7 No 27 0.82 Yes -24 0.89 Yes 46 81.06 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 10978490 - NM_002489 NDUFA4 1 0.01 0.15 9 -9 64.46 32 6.55 Yes 19 0.91 Yes 0 0 No -31 0.73 Yes 39 66.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 123186872 - NR_111926 NDUFA5 1 0.44 1.75 58 8.48 80.55 32 6.78 Yes 19 0.28 No 31 0.67 Yes -31 0.7 Yes 39 83.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 123190639 - NR_111926 NDUFA5 1 0.47 1.99 60 0.69 84.05 36 7.79 Yes 31 0.92 Yes 0 0 No -35 0.78 Yes 35 74.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 123191631 - NR_111926 NDUFA5 1 0.55 2.26 58 8.85 93.14 24 5.37 No 14 0.27 No 26 0.7 Yes -26 0.48 No 44 65.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 42487305 + NR_034118 NDUFA6-AS1 1 4.69 0.29 15 1.55 0 34 7.02 Yes 10 0.86 Yes 28 0.91 Yes -33 0.86 Yes 37 90.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8376496 - NM_005001 NDUFA7 1 0.11 0.42 18 -1.53 65 40 6.78 Yes 27 0.65 No 0 0 No -27 0.52 No 31 64.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8381523 - NM_005001 NDUFA7 1 0.06 0.19 10 -1.48 0 10 4 No 35 1.66 Yes 0 0 No -31 0.88 Yes 39 91.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8381552 - NM_005001 NDUFA7 1 0.05 0.17 9 9.41 88.1 19 4.79 No 6 1.66 Yes 0 0 No -24 0.66 No 52 61.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8384276 - NM_005001 NDUFA7 1 0.1 0.28 13 3.79 80.12 25 5.81 Yes 12 1.73 Yes 0 0 No -24 0.68 Yes 46 82.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8384279 - NM_005001 NDUFA7 1 0.26 0.76 35 5.2 85.02 22 5.64 Yes 9 1.76 Yes 21 0.87 Yes -21 0.78 Yes 49 81.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 8385819 - NM_005001 NDUFA7 1 0.04 0.15 10 8.3 79.57 88 9.93 Yes 75 0.89 Yes 0 0 No -50 0.35 No 17 49.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 124910553 - NM_001318195 NDUFA8 1 0.06 0.21 13 3.79 0 24 5.1 No 11 2.49 Yes 0 0 No -23 0.9 Yes 47 96.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 124910553 - NM_001318195 NDUFA8 1 0.2 0.57 33 3.79 0 24 5.1 No 11 2.49 Yes 0 0 No -23 0.9 Yes 47 96.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 4763478 + NM_005002 NDUFA9 1 0.25 0.92 42 2.85 67.7 24 5.01 No 58 -3.58 No 0 0 No -24 0.66 No 46 39.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 4765599 + NM_005002 NDUFA9 1 0.07 0.29 16 7.53 90.7 25 8.04 Yes 12 1.01 Yes 0 0 No -22 0.55 No 48 60.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 4771361 + NM_005002 NDUFA9 1 0.05 0.21 13 9.69 94.97 25 5.37 No 39 1.54 Yes 0 0 No -26 0.87 Yes 46 74.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 4771677 + NM_005002 NDUFA9 1 0.1 0.43 21 6.52 70.26 24 6.71 Yes 11 0.78 Yes 0 0 No -27 0.6 No 43 81.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 4776702 + NM_005002 NDUFA9 1 0.03 0.14 9 3.01 0 35 8.56 Yes 22 1.05 Yes 0 0 No -34 0.51 No 36 50.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 4773253 + NM_005002 NDUFA9 1 0.02 0.11 7 4.01 76.2 38 6.56 Yes 72 0.45 No 0 0 No -37 0.9 Yes 33 86.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 4776702 + NM_005002 NDUFA9 1 0.25 1.28 41 3.01 0 35 8.56 Yes 22 1.05 Yes 0 0 No -34 0.51 No 36 50.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 4796116 + NM_005002 NDUFA9 1 0.03 0.15 9 -1.17 71.48 22 4.67 No 44 0.11 No 0 0 No -45 0.76 Yes 25 66.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23602472 - NM_005003 NDUFAB1 1 0.03 0.15 9 6.24 78.42 20 6.55 Yes 67 0.02 No 0 0 No -35 0.64 No 35 78.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23606960 - NM_005003 NDUFAB1 1 0.04 0.21 11 9.82 86.38 15 5.74 Yes 2 1.04 Yes 26 0.74 Yes -26 0.78 Yes 44 84.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41679779 - NM_016013 NDUFAF1 1 11.68 7.63 71 6.28 84.63 21 4.61 No 26 0.32 No 0 0 No -20 0.54 No 50 46.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41686557 - NM_016013 NDUFAF1 1 20.13 10.31 72 9.15 94.15 30 5.37 No 72 0.72 No 29 0.82 Yes -29 0.78 Yes 41 49.82 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 41689158 - NM_016013 NDUFAF1 1 1.75 0.43 21 7.92 90.84 46 6.85 Yes 33 1.2 Yes 0 0 No -23 0.44 No 47 61.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41689335 - NM_016013 NDUFAF1 1 0.54 0.14 9 1.07 0 34 8.85 Yes 41 1.01 Yes 0 0 No -33 0.62 No 37 81.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 60252708 + NM_174889 NDUFAF2 1 0.12 0.17 11 7.94 84.45 25 8.02 Yes 12 1.15 Yes 0 0 No -24 0.49 No 46 36.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 60341350 + NM_174889 NDUFAF2 1 0.3 0.38 22 8.75 86.91 27 4.85 No 42 1.58 Yes 0 0 No -27 0.77 Yes 43 85.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 60341666 + NM_174889 NDUFAF2 1 0.25 0.32 18 11.14 89.63 48 8.68 Yes 35 1.3 Yes 0 0 No -28 0.92 Yes 42 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 60379069 + NM_174889 NDUFAF2 1 0.12 0.24 13 5.71 74.99 35 8.47 Yes 42 1.22 Yes 34 0.73 Yes -34 0.82 Yes 36 79.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 60396496 + NM_174889 NDUFAF2 1 0.19 0.25 12 6.08 88.26 31 7.54 Yes 18 0.89 Yes 0 0 No -30 0.75 Yes 33 55.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 60448520 + NM_174889 NDUFAF2 1 0.14 0.21 14 0.65 0 33 5.11 No 5 0.66 No 30 0.61 Yes -21 0.4 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 60448526 + NM_174889 NDUFAF2 1 1.17 1.64 52 -1.66 0 39 5.52 No 11 0.64 No 30 0.61 Yes -27 0.33 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 49060310 + NM_199069 NDUFAF3 1 13.95 32.28 72 -3.73 73.94 21 3.87 No 28 -0.32 No 0 0 No -24 0.72 Yes 47 72.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49060732 + NM_199069 NDUFAF3 1 0.07 0.25 16 9.98 87.51 30 8.59 Yes 62 0.98 Yes 0 0 No -25 0.68 Yes 45 75.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 97344030 - NM_014165 NDUFAF4 1 0.6 1.88 52 7.02 93.52 23 4.89 No 70 0.57 No 23 0.37 Yes -25 0.36 No 45 67.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 97344715 - NM_014165 NDUFAF4 1 0.24 0.38 19 0.95 0 12 4.24 No 16 1.49 Yes 0 0 No -36 0.84 Yes 34 77.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 13767823 + NM_024120 NDUFAF5 1 1.17 0.43 23 -0.88 60.53 37 8.15 Yes 29 0.78 Yes 0 0 No -36 0.42 No 34 57.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 13773805 + NM_024120 NDUFAF5 1 20.62 10.43 72 7.66 92.33 21 6.4 Yes 45 1.24 Yes 20 0.78 Yes -20 0.8 Yes 50 81.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 13774952 + NM_024120 NDUFAF5 1 0.19 0.14 10 3.3 0 35 6.4 Yes 30 1.79 Yes 0 0 No -34 0.78 Yes 36 89.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 13782153 + NM_024120 NDUFAF5 1 0.93 0.44 24 5.34 77.75 19 3.88 No 40 0.4 No 29 0.71 Yes -29 0.86 Yes 41 67.26 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 13782463 + NM_024120 NDUFAF5 1 2.88 1.36 50 12.33 87.36 40 7.89 Yes 27 0.91 Yes 39 0.63 Yes -39 0.9 Yes 31 93.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 13783795 + NM_024120 NDUFAF5 1 0.22 0.13 7 8.14 84.47 23 6.24 Yes 10 0.23 No 22 0.82 Yes -22 0.78 Yes 48 79.61 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 13792818 + NM_024120 NDUFAF5 1 0.27 0.13 9 6.58 69.05 37 9.55 Yes 24 2.3 Yes 0 0 No -36 0.79 Yes 34 84.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 13793616 + NM_024120 NDUFAF5 1 1.35 0.58 29 11.34 94.39 28 5.74 Yes 31 1.63 Yes 27 0.81 Yes -27 0.72 Yes 43 80.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 13795063 + NM_024120 NDUFAF5 1 24.65 10.36 72 7.44 86.16 28 5.12 No 15 0.29 No 27 0.91 Yes -27 0.91 Yes 43 92.25 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 96046235 + NM_001330582 NDUFAF6 1 106.72 6.01 72 3.44 80.7 24 5.98 Yes 25 0.34 No 23 0.71 Yes -23 0.82 Yes 47 75.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 96048529 + NM_001330582 NDUFAF6 1 6.07 2.97 67 5.45 78.84 25 6.95 Yes 12 1.61 Yes 24 0.92 Yes -24 0.64 No 46 68.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 96048598 + NM_001330582 NDUFAF6 1 7.06 3.4 70 5.48 86.02 23 5.2 No 10 0.96 Yes 22 0.97 Yes -22 0.91 Yes 48 91.83 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 96052933 + NM_001330582 NDUFAF6 1 0.62 0.26 15 7.21 88.81 23 3.93 No 45 0.98 Yes 22 0.79 Yes -26 0.6 No 44 53.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 96056704 + NM_001330582 NDUFAF6 1 3.99 2.24 62 3.01 0 37 8.63 Yes 24 2.18 Yes 36 0.76 Yes -36 0.62 No 34 92.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 96059196 + NM_001330582 NDUFAF6 1 0.31 0.19 12 -10.9 0 13 4.36 No 15 0.49 No 27 0.48 Yes -37 0.41 No 20 45.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 96059242 + NM_001330582 NDUFAF6 1 0.39 0.24 12 4.89 80.14 17 4.69 No 61 0.49 No 0 0 No -25 0.41 No 53 48.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37469531 + NM_144736 NDUFAF7 1 0.38 0.1 7 4.42 80.32 29 5.79 Yes 7 1.96 Yes 0 0 No -28 0.76 Yes 42 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 37471053 + NM_144736 NDUFAF7 1 0.89 0.35 21 7.69 81.54 15 5.38 No -4 0.35 No 22 0.39 Yes -22 0.4 No 48 49.75 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 37474641 + NM_144736 NDUFAF7 1 1.38 0.85 38 6.16 86.36 19 5.16 No 48 0.98 Yes 0 0 No -21 0.92 Yes 49 94.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 37475400 + NM_144736 NDUFAF7 1 1.64 0.39 20 5.58 80.74 27 6.3 Yes 14 0.97 Yes 26 0.89 Yes -26 0.71 Yes 44 78.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79213571 + NM_001086521 NDUFAF8 1 0.61 1.21 43 7.21 75.37 47 6.44 Yes NA NA NA 24 0.11 Yes -40 0.27 No 30 57.48 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79213597 + NM_001086521 NDUFAF8 1 0.22 0.43 26 4.44 67.05 22 5.29 No 17 -2.06 No 0 0 No -21 0.86 Yes 49 74.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79214029 + NM_001086521 NDUFAF8 1 0.25 0.51 26 4.7 72.14 16 4.67 No 44 0.71 No 0 0 No -20 0.72 Yes 50 56.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 92582586 - NM_004545 NDUFB1 1 0.02 0.15 11 1.93 0 28 5.55 No 49 1.96 Yes 39 0.63 Yes -27 0.93 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 92585291 - NM_004545 NDUFB1 1 0.03 0.18 10 6.33 85.7 27 5.2 No 59 1.13 Yes 0 0 No -26 0.74 Yes 44 28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 92586396 - NM_004545 NDUFB1 1 0.05 0.28 16 8.12 85.69 39 8.61 Yes 1 0.45 No 0 0 No -25 0.4 No 45 56.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 92587744 - NM_004545 NDUFB1 1 0.26 1.22 41 -1.18 57.81 19 4.76 No 9 -1.74 No 0 0 No -18 0.73 Yes 49 38.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 92587758 - NM_004545 NDUFB1 1 0.2 0.97 39 2.91 78.22 16 4.69 No 3 -0.38 No 24 0.77 Yes -15 0.68 Yes 55 68.32 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 2011531 + NM_004548 NDUFB10 1 0.07 0.26 15 3.85 80.63 16 4.37 No 53 0.69 No 0 0 No -26 0.56 No 44 36.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2011802 + NM_004548 NDUFB10 1 0.9 3.03 64 2.33 0 30 5.85 Yes 61 1.2 Yes 0 0 No -29 0.77 Yes 41 92.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 140397155 + NM_004546 NDUFB2 1 0.03 0.11 8 5.1 85.62 43 6.28 Yes 30 0.11 No 0 0 No -26 0.82 Yes 44 85.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 140405914 + NM_004546 NDUFB2 1 0.01 0.1 7 -1.67 77.43 65 4.85 No 40 -3.2 No 26 0.6 Yes -27 0.48 No 33 43.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 140405918 + NM_004546 NDUFB2 1 0.35 2.4 60 1.6 0 69 4.96 No 44 -3.21 No 26 0.6 Yes -31 0.41 No 34 45.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 140405938 + NM_004546 NDUFB2 1 0.07 0.43 20 4.3 84.83 27 3.8 No 2 0.97 Yes 0 0 No -26 0.68 Yes 44 57.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 201937782 + NM_001257102 NDUFB3 1 0.41 0.1 7 -2.45 0 25 5.29 No 34 0.3 No 0 0 No -24 0.74 Yes 17 35.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 201937793 + NM_001257102 NDUFB3 1 2.07 0.5 22 -0.96 0 18 4.47 No 45 0.31 No 0 0 No -17 0.46 No 55 42.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 201937832 + NM_001257102 NDUFB3 1 3.35 0.79 36 0 60.07 28 5.63 Yes 59 -5.63 No 0 0 No -27 0.74 Yes 43 56.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 201937842 + NM_001257102 NDUFB3 1 0.32 0.1 7 -0.99 0 13 4.36 No 69 -6.25 No 0 0 No -37 0.54 No 50 20.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 201950249 + NM_001257102 NDUFB3 1 0.05 0.25 16 7.49 86.22 16 6.16 Yes 3 1.47 Yes 0 0 No -35 0.61 No 35 73.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 120316924 + NM_001168331 NDUFB4 1 0.17 2.1 58 4.04 0 29 9.23 Yes 16 1.52 Yes 0 0 No -28 0.75 Yes 42 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 120320019 + NM_001168331 NDUFB4 1 0.31 3.82 69 7.69 83.79 21 5.99 Yes 74 1.06 Yes 0 0 No -20 0.39 No 49 40.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 120321054 + NM_001168331 NDUFB4 1 0.01 0.18 11 12.78 96.9 26 6.99 Yes 73 1.52 Yes 26 0.85 Yes -26 0.59 No 44 70.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 179325545 + NM_002492 NDUFB5 1 0.1 0.39 23 7.43 72.16 25 8.8 Yes 12 1.74 Yes 24 0.62 Yes -25 0.4 No 45 42.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 179332739 + NM_002492 NDUFB5 1 0.72 2.64 62 4.71 78.48 34 6.14 Yes 47 -5.06 No 26 0.41 Yes -33 0.62 No 37 70.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 179333343 + NM_002492 NDUFB5 1 0.55 1.44 56 6.08 85.32 20 5.9 Yes 7 1.63 Yes 19 0.87 Yes -32 0.47 No 38 58.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 179333772 + NM_002492 NDUFB5 1 0.22 0.58 27 2.45 83.77 31 5.44 No 18 0.16 No 28 0.89 Yes -30 0.83 Yes 40 82.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 179339307 + NM_002492 NDUFB5 1 0.08 0.43 20 3.99 0 41 6.59 Yes 28 1.34 Yes 0 0 No -40 0.56 No 30 84.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 179339780 + NM_002492 NDUFB5 1 0.07 0.38 18 4.93 0 32 5.69 Yes 19 1.2 Yes 0 0 No -31 0.92 Yes 39 92.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 32565283 - NM_002493 NDUFB6 1 0.09 0.36 19 4.09 0 30 5.6 Yes 17 1.43 Yes 0 0 No -36 0.44 No 34 66.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 32568429 - NM_002493 NDUFB6 1 0.2 0.71 33 2.34 62.25 42 5.58 Yes 29 0.17 No 0 0 No -41 0.51 No 29 72.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 32570524 - NM_002493 NDUFB6 1 0.07 0.24 16 6.42 86.88 27 8.62 Yes 44 1.04 Yes 0 0 No -26 0.77 Yes 44 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 14677744 - NM_004146 NDUFB7 1 0.04 0.17 11 -0.78 69.61 24 5.48 No 11 0.62 No 21 0.76 Yes -23 0.85 Yes 47 84.27 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 14682383 - NM_004146 NDUFB7 1 0.41 1.99 56 8.91 98.05 27 5.2 No 14 -0.04 No 0 0 No -26 0.55 No 46 43.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 102283675 - NM_001284368 NDUFB8 1 0.02 0.14 7 -6.63 0 19 4.58 No 20 2.4 Yes 0 0 No -53 0.56 No 38 71.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 102286852 - NM_001284368 NDUFB8 1 0.02 0.14 8 0.87 0 15 4.36 No 55 0.63 No 0 0 No -14 0.75 Yes 56 74.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 125555329 + NM_005005 NDUFB9 1 1.38 7.26 72 -8.91 76.8 28 5.9 Yes 40 1.14 Yes 21 0.24 Yes -27 0.85 Yes 43 91.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 125555360 + NM_005005 NDUFB9 1 0.47 2.51 64 -12.3 69.13 36 4.88 No 71 1.15 Yes 21 0.24 Yes -21 0.79 Yes 49 48.62 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 125555362 + NM_005005 NDUFB9 1 0.31 1.63 58 -1.82 70.32 38 5 No 73 1.15 Yes 0 0 No -23 0.84 Yes 47 56.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 140216295 - NM_001184990 NDUFC1 1 0.44 1.01 52 3.25 0 9 3.87 No 53 -1.11 No 0 0 No -28 0.8 Yes 42 93.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 140216319 - NM_001184990 NDUFC1 1 0.06 0.13 8 0.56 79.05 17 4.35 No 67 -2.4 No 22 0.93 Yes -25 0.41 No 54 35.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 206991332 - NM_001199982 NDUFS1 1 0.06 0.22 15 0.73 0 25 7.11 Yes 12 1.2 Yes 0 0 No -24 0.34 No 34 48.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 206991356 - NM_001199982 NDUFS1 1 0.03 0.11 8 -1.74 0 13 5.03 No 16 0.91 Yes 27 0.54 Yes -20 0.55 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 207003580 - NM_001199982 NDUFS1 1 0.06 0.19 11 4.44 82.25 19 4.9 No 38 1.57 Yes 0 0 No -27 0.48 No 43 72.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 207006789 - NM_001199982 NDUFS1 1 0.11 0.24 14 1.69 0 35 5.33 No 22 0.23 No 0 0 No -27 0.49 No 43 43.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 207007550 - NM_001199982 NDUFS1 1 0.21 0.44 26 3.45 0 9 3.87 No 17 1.58 Yes 0 0 No -29 0.78 Yes 41 88.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 207009747 - NM_001199982 NDUFS1 1 0.13 0.31 17 -3.01 0 26 6 Yes 49 0.81 Yes 0 0 No -25 0.46 No 45 53.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 207009782 - NM_001199982 NDUFS1 1 0.89 2.11 63 5.03 77.47 27 5.57 Yes 14 0.83 Yes 21 0.5 Yes -26 0.86 Yes 44 86.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 161173192 + NM_001166159 NDUFS2 1 0.05 0.1 7 0.99 74 13 5.18 No 45 -3.75 No 23 0.51 Yes -22 0.31 No 53 33.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 161173228 + NM_001166159 NDUFS2 1 0.05 0.1 7 0.43 78 26 5.65 Yes -1 0.3 No 0 0 No -25 0.65 No 45 72.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 161173576 + NM_001166159 NDUFS2 1 0.12 0.49 23 8.04 86.81 25 7.47 Yes 12 0.6 No 24 0.95 Yes -24 0.93 Yes 46 96.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 161179632 + NM_001166159 NDUFS2 1 0.03 0.11 8 3.02 72.62 15 6.68 Yes -4 0.8 Yes 22 0.91 Yes -14 0.52 No 56 38.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 161182131 + NM_001166159 NDUFS2 1 0.02 0.1 7 -0.47 0 27 7.35 Yes 14 2.43 Yes 35 0.92 Yes -26 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 161182381 + NM_001166159 NDUFS2 1 0.84 2.88 66 2.56 0 38 7.67 Yes 25 1.01 Yes 31 0.42 Yes -31 0.43 No 39 65.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 161182879 + NM_001166159 NDUFS2 1 0.05 0.18 9 2.24 80.12 20 5.57 Yes 7 1.02 Yes 19 0.66 Yes -19 0.74 Yes 51 85.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47602727 + NM_004551 NDUFS3 1 0.14 0.57 23 9.19 88.27 36 5.52 No 23 0.91 Yes 31 0.71 Yes -31 0.68 Yes 39 83.02 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 52900553 + NR_134475 NDUFS4 1 2.99 8.38 72 11.97 84.17 26 5.29 No 13 1.36 Yes 25 0.94 Yes -25 0.73 Yes 45 78.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 52932685 + NR_134475 NDUFS4 1 0.05 0.17 11 10.67 87.75 39 6.55 Yes 27 -1.56 No 0 0 No -26 0.6 No 44 64.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 1802262 + NM_004553 NDUFS6 1 0.24 0.72 30 9.07 93.29 21 4.22 No 8 1.37 Yes 29 0.93 Yes -29 0.78 Yes 41 76.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 1811022 + NM_004553 NDUFS6 1 0.04 0.11 7 3.56 67.81 18 4.43 No 26 0.78 Yes 0 0 No -44 0.52 No 26 36.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 1811081 + NM_004553 NDUFS6 1 0.32 0.88 38 -1.76 0 39 5.32 No 26 0.13 No 0 0 No -38 0.78 Yes 32 91.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 1811111 + NM_004553 NDUFS6 1 0.15 0.44 20 8.74 84.24 37 4.53 No 24 0.83 Yes 0 0 No -22 0.7 Yes 48 76.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1386516 + NM_024407 NDUFS7 1 0.06 0.17 11 2.88 83.57 23 7.73 Yes 10 1.79 Yes 22 0.71 Yes -22 0.52 No 42 47.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 1388529 + NM_024407 NDUFS7 1 0.11 0.29 14 -2.23 0 14 3.87 No 17 2.42 Yes 0 0 No -29 0.93 Yes 41 87.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1394416 + NM_024407 NDUFS7 1 0.43 1.04 39 11.12 86.45 31 4.28 No NA NA NA 23 0.7 Yes -23 0.67 Yes 47 67.97 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 1395216 + NM_024407 NDUFS7 1 0.14 0.33 17 9.16 91.5 14 4.78 No 46 -2.23 No 0 0 No -26 0.44 No 44 35.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67374769 + NM_007103 NDUFV1 1 0.08 0.26 15 9.13 86.71 27 8.62 Yes 14 2.01 Yes 26 0.95 Yes -26 0.87 Yes 44 86.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67374836 + NM_007103 NDUFV1 1 0.08 0.26 15 7.98 84.67 19 5.74 Yes 6 0.45 No 26 0.5 Yes -18 0.62 No 52 54.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 67375870 + NM_007103 NDUFV1 1 0.93 3 65 4.66 0 22 6.78 Yes 9 2.28 Yes 19 0.2 Yes -21 0.64 No 49 88.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 67375902 + NM_007103 NDUFV1 1 0.1 0.35 22 3.3 77.15 27 3.44 No 41 2.24 Yes 27 0.43 Yes -27 0.36 No 17 38.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 67376896 + NM_007103 NDUFV1 1 0.05 0.22 14 2.84 70.6 13 3.83 No 0 0.57 No 26 0.68 Yes -12 0.32 No 58 63.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 67378947 + NM_007103 NDUFV1 1 0.16 0.71 34 2.76 65.71 67 6.71 Yes -3 0.85 Yes 36 0.31 Yes -17 0.26 No 34 64.29 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 67378959 + NM_007103 NDUFV1 1 0.07 0.22 13 -4.08 0 22 4.58 No 9 1.01 Yes 24 0.94 Yes -21 0.92 Yes 49 68.4 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 67378992 + NM_007103 NDUFV1 1 0.45 1.78 64 4.78 76.23 25 6.46 Yes 42 1 Yes 24 0.94 Yes -24 0.82 Yes 46 61.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 9103089 + NM_021074 NDUFV2 1 0.22 1.56 49 8.98 81.83 44 8.06 Yes 31 0.35 No 31 0.44 Yes -31 0.43 No 39 51.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 9103094 + NM_021074 NDUFV2 1 0.02 0.14 8 1.7 0 49 8.37 Yes 36 0.33 No 0 0 No -36 0.37 No 34 50.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 9113911 + NM_021074 NDUFV2 1 0.01 0.1 7 5.21 83.32 22 4.17 No 9 0.51 No 0 0 No -21 0.8 Yes 49 81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 9115525 + NM_021074 NDUFV2 1 0.03 0.19 14 8.52 92.9 28 4.71 No 2 0.61 No 0 0 No -32 0.71 Yes 38 83.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 9119325 + NM_021074 NDUFV2 1 0.04 0.32 21 -17.35 0 25 5.75 Yes 55 0.55 No 0 0 No -24 0.85 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 9119328 + NM_021074 NDUFV2 1 0.03 0.24 14 0.94 0 28 5.98 Yes 58 0.54 No 0 0 No -27 0.85 Yes 43 59.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 9119375 + NM_021074 NDUFV2 1 0.02 0.13 9 4.8 80.39 31 5.39 No 12 1.61 Yes 0 0 No -24 0.61 No 40 51.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 9119478 + NM_021074 NDUFV2 1 0.02 0.17 10 -11.31 0 14 4 No 15 0.93 Yes 0 0 No -33 0.43 No 37 49.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 9124919 + NM_021074 NDUFV2 1 0.03 0.21 12 6.99 83.09 22 6.32 Yes 70 1.03 Yes 0 0 No -21 0.68 Yes 49 83.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 9126831 + NM_021074 NDUFV2 1 0.12 1.07 40 -6.85 86.26 27 6.15 Yes 4 0.76 No 0 0 No -23 0.44 No 47 49.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 44323520 + NM_021075 NDUFV3 1 0.33 0.35 15 8.27 87.37 25 5 No 36 -2.32 No 0 0 No -24 0.59 No 46 75.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 44323595 + NM_021075 NDUFV3 1 0.29 0.28 16 9.21 86.63 30 6.32 Yes 17 1.49 Yes 0 0 No -29 0.95 Yes 41 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 44326949 + NM_021075 NDUFV3 1 1.64 0.71 12 5.7 83.66 24 5.1 No 52 1.66 Yes 0 0 No -23 0.58 No 43 61.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 32247805 - NM_031232 NECAB3 1 1.38 0.14 8 1.49 0 23 4.39 No 10 0.75 No 24 0.1 Yes -22 0.74 Yes 48 74.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 32258228 - NM_031232 NECAB3 1 0.74 0.11 8 10.79 85.54 26 5.61 Yes 13 1.09 Yes 25 0.95 Yes -25 0.94 Yes 45 95.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 32258567 - NM_031232 NECAB3 1 7.67 0.43 23 -2.81 0 17 4.22 No -1 -1.44 No 24 0.64 Yes -29 0.64 No 54 42.19 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 16776619 + NM_001145278 NECAP2 1 0.49 1.01 45 1.31 67 73 6.55 Yes 60 1.75 Yes 20 0.51 Yes -53 0.89 Yes 17 93.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 16779649 + NM_001145278 NECAP2 1 0.28 0.6 30 7.56 83.55 31 5.57 Yes 18 -0.06 No 0 0 No -30 0.51 No 40 44.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 119545999 - NM_203285 NECTIN1 1 0.39 0.11 7 6.22 78.27 19 5.57 Yes 40 1.03 Yes 0 0 No -18 0.67 Yes 52 69.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 119568176 - NM_203285 NECTIN1 1 0.47 0.15 11 7.12 86.35 22 4.69 No 9 1.6 Yes 0 0 No -21 0.93 Yes 49 96.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 97301479 + NM_001135175 NEDD1 1 10.48 0.44 21 3.7 83.41 14 4.73 No 56 0.85 Yes 24 0.74 Yes -24 0.78 Yes 46 56.34 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 97318610 + NM_001135175 NEDD1 1 3.95 5.86 72 5.02 70.92 44 8.18 Yes 31 1.41 Yes 28 0.58 Yes -43 0.42 No 27 60.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 97328940 + NM_001135175 NEDD1 1 0.11 0.17 11 6.57 80.78 48 5.14 No 9 0.42 No 0 0 No -25 0.6 No 45 73.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 97337451 + NM_001135175 NEDD1 1 0.09 0.1 7 5.14 80.68 22 5.93 Yes 9 0.83 Yes 0 0 No -22 0.51 No 34 60.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 97338487 + NM_001135175 NEDD1 1 0.16 0.24 14 -1.08 59.26 44 5.35 No -2 0.83 Yes 0 0 No -29 0.82 Yes 41 50.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 97345211 + NM_001135175 NEDD1 1 1.53 2.17 64 -1.8 78.83 27 5.37 No 14 0.57 No 0 0 No -26 0.83 Yes 44 73.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 97345214 + NM_001135175 NEDD1 1 1.64 2.36 62 -4.31 0 30 5.63 Yes 17 0.58 No 0 0 No -29 0.84 Yes 41 73.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 97345707 + NM_001135175 NEDD1 1 0.1 0.15 8 -0.64 56.83 28 6.47 Yes 71 -6.22 No 25 0.89 Yes -27 0.37 No 43 18.59 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 56197480 - NM_001329212 NEDD4 1 1.06 0.15 9 5.1 86.62 22 4.69 No 12 0.53 No 24 0.69 Yes -21 0.62 No 46 86.94 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 56209110 - NM_001329212 NEDD4 1 1.85 0.43 20 6.97 89.63 20 6.32 Yes 63 1.46 Yes 0 0 No -29 0.3 No 41 54.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56211548 - NM_001329212 NEDD4 1 0.56 0.13 7 9.57 85.61 38 5.9 Yes 59 1.34 Yes 0 0 No -29 0.61 No 32 33.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56228535 - NM_001329212 NEDD4 1 0.74 0.18 12 7.41 89.44 26 8.66 Yes 13 0.79 Yes 0 0 No -25 0.64 No 45 63.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56280200 - NM_001329212 NEDD4 1 3.99 0.72 30 7.75 87.72 31 5.71 Yes 1 1.29 Yes 27 0.21 Yes -27 0.72 Yes 43 64.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 56284204 - NM_001329212 NEDD4 1 8 1.25 45 10.17 88.06 34 6.78 Yes 21 1.82 Yes 33 0.92 Yes -33 0.87 Yes 37 93.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 56284311 - NM_001329212 NEDD4 1 0.7 0.13 8 6.71 84.89 24 6.08 Yes 59 1.26 Yes 0 0 No -23 0.88 Yes 47 80.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 55712303 + NM_001243960 NEDD4L 1 29.81 4.72 70 11.04 83.92 25 7.41 Yes NA NA NA 0 0 No -25 0.73 Yes 45 69.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 55730473 + NM_001243960 NEDD4L 1 0.51 0.1 7 7.73 86.87 31 7.87 Yes 18 1.51 Yes 0 0 No -30 0.9 Yes 40 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 55895061 + NM_001243960 NEDD4L 1 3.31 1.18 46 8.68 89.11 26 4.98 No 37 0.87 Yes 25 0.85 Yes -25 0.85 Yes 45 69.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24687761 - NM_001199823 NEDD8-MDP1 1 0.02 0.1 7 3.91 73.87 26 5.47 No 13 0.19 No 0 0 No -25 0.84 Yes 45 86.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 24697919 - NM_001199823 NEDD8-MDP1 1 0.06 0.38 20 5.6 0 39 5.9 Yes 38 1.01 Yes 38 0.38 Yes -36 0.68 Yes 32 68.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 24700944 - NM_001199823 NEDD8-MDP1 1 1.09 6.35 71 9.37 85.44 28 4.15 No 1 1.47 Yes 28 0.54 Yes -28 0.75 Yes 42 70.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24701074 - NM_001199823 NEDD8-MDP1 1 0.48 2.93 61 9.84 94.12 29 5.92 Yes 45 1.35 Yes 0 0 No -28 0.82 Yes 42 83.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 11191828 - NR_073131 NEDD9 1 0.07 0.11 8 2.84 74.87 25 4.9 No 66 1.51 Yes 0 0 No -24 0.76 Yes 46 83.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 11316786 - NR_073131 NEDD9 1 1.42 1.17 51 8.15 81.5 17 4.79 No 76 0.99 Yes 0 0 No -21 0.43 No 49 62.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 11327860 - NR_073131 NEDD9 1 0.6 0.53 27 10.1 81.9 36 7.35 Yes 44 1.63 Yes 0 0 No -35 0.7 Yes 35 80.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 11329109 - NR_073131 NEDD9 1 0.34 0.28 19 10.85 87.04 17 8.78 Yes 4 1.83 Yes 23 0.83 Yes -23 0.68 Yes 47 83.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 11334795 - NR_073131 NEDD9 1 2.14 1.72 55 3.9 83.5 28 8.06 Yes 15 1.28 Yes 27 0.77 Yes -27 0.8 Yes 43 85.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 11340885 - NR_073131 NEDD9 1 0.53 0.47 22 6.28 81.85 21 5.19 No 8 0.98 Yes 0 0 No -20 0.69 Yes 50 83.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 11352135 - NR_073131 NEDD9 1 0.16 0.14 9 6.1 81.43 31 5.83 Yes 39 1.42 Yes 0 0 No -30 0.88 Yes 40 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 11353014 - NR_073131 NEDD9 1 12.68 11.08 72 8.84 87.36 36 5.76 Yes 14 0.93 Yes 26 0.61 Yes -29 0.56 No 41 77.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 11371302 - NR_073131 NEDD9 1 0.09 0.1 7 8.22 83.61 26 5.44 No 0 0.89 Yes 0 0 No -25 0.87 Yes 45 93.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 11380818 - NR_073131 NEDD9 1 0.47 0.42 23 11.95 89.13 24 5.48 No 11 0.27 No 0 0 No -23 0.89 Yes 47 88.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 178260847 + NM_018248 NEIL3 1 0.73 0.19 10 5.69 78.25 16 3.83 No 35 -2.13 No 0 0 No -25 0.85 Yes 45 81.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 178265727 + NM_018248 NEIL3 1 3.71 0.88 38 0.84 81.28 40 8.87 Yes 27 2.11 Yes 0 0 No -30 0.69 Yes 31 49.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 178275101 + NM_018248 NEIL3 1 0.98 0.36 19 5.42 92.4 17 5.83 Yes 4 1.23 Yes 0 0 No -30 0.49 No 43 58.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 178281707 + NM_018248 NEIL3 1 0.37 0.19 10 5.65 76.42 33 4.78 No 53 1.6 Yes 0 0 No -32 0.72 Yes 38 71.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 170318206 - NM_012224 NEK1 1 0.99 0.19 11 7.06 93.66 26 6.55 Yes 13 2.16 Yes 0 0 No -25 0.7 Yes 45 82.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 170430004 - NM_012224 NEK1 1 1.53 0.64 35 1.79 68.5 27 4.94 No 36 0.33 No 21 0.63 Yes -21 0.52 No 49 58.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 170477187 - NM_012224 NEK1 1 0.42 0.19 10 1.28 0 23 6.16 Yes 10 0.32 No 0 0 No -31 0.68 Yes 45 83.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 170479860 - NM_012224 NEK1 1 0.36 0.17 12 7.06 70.76 28 8.64 Yes 15 0.84 Yes 0 0 No -27 0.84 Yes 43 82.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 170482306 - NM_012224 NEK1 1 1.4 0.63 30 6.14 72.02 25 5.6 Yes 70 0.82 Yes 0 0 No -30 0.63 No 46 64.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 170484501 - NM_012224 NEK1 1 0.36 0.11 7 3.41 0 34 6.95 Yes 21 0.55 No 0 0 No -33 0.61 No 37 85.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 170496676 - NM_012224 NEK1 1 3.72 0.96 39 3.77 0 20 2.63 No 58 -3.44 No 0 0 No -31 0.31 No 52 44.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 170500621 - NM_012224 NEK1 1 0.23 0.15 9 8.68 88.39 20 5.02 No 7 1 Yes 0 0 No -29 0.71 Yes 41 59.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 170506609 - NM_012224 NEK1 1 0.33 0.14 8 6.94 80.45 54 6.61 Yes 47 0.05 No 0 0 No -36 0.52 No 48 42.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 170514291 - NM_012224 NEK1 1 0.31 0.15 7 9.04 84.58 22 6.18 Yes 36 2.39 Yes 0 0 No -21 0.52 No 49 68.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 170519751 - NM_012224 NEK1 1 0.62 0.25 14 10.59 85.98 31 6.8 Yes 18 1.92 Yes 0 0 No -30 0.89 Yes 40 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 170519751 - NM_012224 NEK1 1 0.44 0.15 10 10.59 85.98 31 6.8 Yes 18 1.92 Yes 0 0 No -30 0.89 Yes 40 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 170525680 - NM_012224 NEK1 1 0.62 0.15 11 6.7 85.01 24 5.24 No 11 0.23 No 0 0 No -23 0.9 Yes 47 82.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 170532110 - NM_012224 NEK1 1 0.95 0.26 13 5.28 82 41 6.71 Yes 28 1.22 Yes 0 0 No -40 0.93 Yes 30 94.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211843736 - NM_001204183 NEK2 1 0.45 0.38 22 6.16 83.25 22 4.79 No 9 0.95 Yes 40 0.47 Yes -21 0.88 Yes 49 71.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 211845256 - NM_001204183 NEK2 1 0.35 0.19 10 7.04 67.39 45 8.42 Yes 32 0.62 No 0 0 No -38 0.62 No 32 71.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52745651 - NM_003157 NEK4 1 2.73 1.89 54 9.36 88.5 50 7.99 Yes 37 2.13 Yes 0 0 No -49 0.65 No 21 84.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52753592 - NM_003157 NEK4 1 0.17 0.11 8 2.84 0 50 9.45 Yes 25 0.72 No 0 0 No -37 0.27 No 27 37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52762622 - NM_003157 NEK4 1 0.14 0.1 7 11.26 87.85 31 8.09 Yes 18 0.99 Yes 0 0 No -30 0.68 Yes 40 57.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52764495 - NM_003157 NEK4 1 0.5 0.35 18 8.56 82.27 25 5.62 Yes 12 0.33 No 0 0 No -24 0.94 Yes 46 94.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52773602 - NM_003157 NEK4 1 0.24 0.21 12 1.86 69.42 27 6.05 Yes 62 0.29 No 0 0 No -26 0.86 Yes 44 68.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52776434 - NM_003157 NEK4 1 0.52 0.24 15 8.43 80.25 15 3.87 No 40 1.12 Yes 0 0 No -21 0.75 Yes 49 76.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52777123 - NM_003157 NEK4 1 0.49 0.22 12 5.69 70.02 19 4.69 No 59 0.53 No 0 0 No -18 0.55 No 52 65.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52786910 - NM_003157 NEK4 1 0.18 0.1 7 3.74 0 82 8.27 Yes 69 -1.47 No 0 0 No -30 0.3 No 42 42.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52786910 - NM_003157 NEK4 1 0.17 0.11 8 3.74 0 82 8.27 Yes 69 -1.47 No 0 0 No -30 0.3 No 42 42.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52792028 - NM_003157 NEK4 1 0.6 0.36 20 5.5 85.02 20 7.12 Yes 7 1.29 Yes 0 0 No -19 0.61 No 51 74.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52802583 - NM_003157 NEK4 1 1.86 0.86 40 3.05 63.28 21 6.84 Yes 68 0.83 Yes 20 0.67 Yes -20 0.45 No 50 40.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 127068856 + NM_001166169 NEK6 1 0.11 0.46 23 8.62 92.81 22 5.32 No 26 1.43 Yes 0 0 No -21 0.93 Yes 49 92.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127074789 + NM_001166169 NEK6 1 0.06 0.26 14 -1.55 72.63 30 5.66 Yes 17 1.42 Yes 0 0 No -29 0.96 Yes 41 97.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127074835 + NM_001166169 NEK6 1 0.08 0.33 19 4.29 73.56 39 7.41 Yes 63 1.44 Yes 0 0 No -36 0.63 No 32 78.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 127091255 + NM_001166169 NEK6 1 0.02 0.11 7 5.67 78.48 26 4.27 No 22 0.22 No 0 0 No -22 0.9 Yes 48 88.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127103587 + NM_001166169 NEK6 1 0.09 0.36 14 6.56 89.86 25 5.91 Yes 12 1.3 Yes 0 0 No -24 0.7 Yes 46 91.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127104121 + NM_001166169 NEK6 1 0.04 0.17 11 0.3 0 23 5.32 No 34 -3.84 No 0 0 No -22 0.82 Yes 48 82.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127105970 + NM_001166169 NEK6 1 0.07 0.33 20 8.22 86.03 22 5.1 No 30 0.47 No 0 0 No -21 0.66 No 49 78.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 127111606 + NM_001166169 NEK6 1 0.17 0.88 43 4.29 77.53 62 8.11 Yes 49 0.79 Yes 0 0 No -32 0.66 No 38 64.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 127111609 + NM_001166169 NEK6 1 0.02 0.11 7 -0.38 62.77 65 8.29 Yes 52 0.79 Yes 0 0 No -35 0.55 No 15 59.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 198178812 + NM_133494 NEK7 1 1.51 0.64 26 8.46 84.63 56 9.31 Yes 43 2.09 Yes 0 0 No -31 0.45 No 15 44.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 198190128 + NM_133494 NEK7 1 4.96 2.1 58 2.82 87.09 20 4.8 No 20 0.36 No 19 0.52 Yes -19 0.82 Yes 51 64.2 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 198222172 + NM_133494 NEK7 1 0.17 0.15 11 -0.88 74.05 20 6.73 Yes 7 1.62 Yes 0 0 No -31 0.63 No 35 83.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 198247066 + NM_133494 NEK7 1 0.77 1 44 -1.9 0 12 4.24 No 43 1.26 Yes 28 0.67 Yes -20 0.76 Yes 50 74.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 198247150 + NM_133494 NEK7 1 0.28 0.42 19 0.07 0 21 4.57 No 67 0.03 No 0 0 No -29 0.25 No 41 33.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 198248085 + NM_133494 NEK7 1 0.12 0.17 9 -17.67 0 23 7.51 Yes 10 1.3 Yes 0 0 No -34 0.38 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 198248113 + NM_133494 NEK7 1 0.48 0.82 39 5.1 85.87 16 5.17 No 3 1.42 Yes 0 0 No -25 0.23 No 47 33.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 198259415 + NM_133494 NEK7 1 0.16 0.24 14 9.3 90.71 36 6.72 Yes 7 1.53 Yes 0 0 No -35 0.48 No 35 66.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 27061869 + NM_178170 NEK8 1 0.89 0.19 9 8.89 88.86 22 5.74 Yes 32 0.93 Yes 0 0 No -21 0.57 No 49 76.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 27065579 + NM_178170 NEK8 1 0.52 0.14 9 8.54 84.12 36 6.95 Yes 23 1.43 Yes 0 0 No -35 0.97 Yes 35 96.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27065692 + NM_178170 NEK8 1 3.73 1.08 43 3.84 0 45 7.5 Yes 9 1.55 Yes 0 0 No -44 0.72 Yes 26 83.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27067484 + NM_178170 NEK8 1 0.36 0.13 7 -0.08 0 30 6.82 Yes 64 0.86 Yes 0 0 No -29 0.88 Yes 41 87.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75553625 - NM_001329237 NEK9 1 1.39 2.04 55 9.08 97.18 23 5 No 52 1.11 Yes 0 0 No -22 0.85 Yes 48 86.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75553641 - NM_001329237 NEK9 1 1.07 1.56 51 -4.04 0 15 4.47 No 36 1.08 Yes 0 0 No -19 0.24 No 60 14.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75555287 - NM_001329237 NEK9 1 0.06 0.1 7 4.86 0 25 5.39 No 12 1.61 Yes 0 0 No -24 0.88 Yes 46 93.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75555292 - NM_001329237 NEK9 1 0.43 0.74 35 7.24 82.14 20 4.9 No 7 1.63 Yes 0 0 No -19 0.88 Yes 51 93.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75558191 - NM_001329237 NEK9 1 1.35 1.14 48 0.84 0 25 5.47 No 33 0.83 Yes 24 0.36 Yes -25 0.55 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 75558194 - NM_001329237 NEK9 1 0.4 0.35 19 -2.02 0 22 5.19 No 30 0.82 Yes 24 0.36 Yes -22 0.5 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 75567143 - NM_001329237 NEK9 1 0.11 0.15 10 7.98 83.41 41 6.82 Yes 55 1.72 Yes 0 0 No -40 0.74 Yes 30 70.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75574459 - NM_001329237 NEK9 1 1 1.38 52 6.66 76.88 40 8.81 Yes 27 1.07 Yes 0 0 No -39 0.45 No 31 66.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75580339 - NM_001329237 NEK9 1 0.07 0.17 11 -1.52 73.89 26 6.05 Yes 13 0.85 Yes 0 0 No -25 0.58 No 40 72.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75582982 - NM_001329237 NEK9 1 0.26 0.63 32 4.9 83.83 25 6.48 Yes 12 0.93 Yes 0 0 No -24 0.94 Yes 46 96.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75583114 - NM_001329237 NEK9 1 0.15 0.39 21 3.81 84.79 34 6.71 Yes 2 1.51 Yes 0 0 No -33 0.82 Yes 37 80.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75585605 - NM_001329237 NEK9 1 0.14 0.32 18 3.4 84.07 19 5.27 No 6 0.35 No 0 0 No -28 0.45 No 42 52.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75585637 - NM_001329237 NEK9 1 0.2 0.39 22 -3.66 83.13 27 5.05 No 37 0.01 No 0 0 No -27 0.63 No 43 60.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 1985247 - NM_005663 NELFA 1 0.31 0.25 15 -0.38 71.73 18 4.9 No 53 -3.25 No 21 0.8 Yes -20 0.34 No 24 26.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 1985250 - NM_005663 NELFA 1 0.17 0.14 9 -4.03 0 15 4.58 No 50 -3.25 No 21 0.8 Yes -43 0.37 No 27 34.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 1993437 - NM_005663 NELFA 1 0.37 0.28 17 -3.98 0 16 3.87 No 57 -2.34 No 0 0 No -23 0.38 No 47 48.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 1993458 - NM_005663 NELFA 1 0.96 0.69 37 -0.02 65.97 17 4.36 No 36 -2.67 No 22 0.6 Yes -48 0.24 No 17 29.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 2008927 - NM_005663 NELFA 1 2.32 1.58 53 3.34 0 41 6.71 Yes 59 -1.39 No 40 0.09 Yes -40 0.78 Yes 30 84.9 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2009774 - NM_005663 NELFA 1 1.89 1.26 53 2.2 69.76 31 6.93 Yes 18 2.18 Yes 30 0.95 Yes -30 0.85 Yes 40 91.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140150362 + NM_015456 NELFB 1 0.12 0.13 7 1.62 0 27 5.74 Yes 52 -2 No 0 0 No -26 0.91 Yes 44 81.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140150391 + NM_015456 NELFB 1 0.07 0.11 7 6.03 82.85 36 6 Yes 23 -0.19 No 0 0 No -27 0.38 No 35 48.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140150715 + NM_015456 NELFB 1 0.13 0.19 13 4.99 84.77 11 4.9 No 48 1.64 Yes 0 0 No -17 0.39 No 53 69.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 140151224 + NM_015456 NELFB 1 0.11 0.18 10 6.07 79.16 24 5.48 No 11 0.78 Yes 0 0 No -23 0.89 Yes 47 86.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140151258 + NM_015456 NELFB 1 0.1 0.14 9 -2.57 0 9 5.04 No 45 0.77 No 25 0.96 Yes -57 0.56 No 62 37.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 140151314 + NM_015456 NELFB 1 0.06 0.1 7 -2.01 68.79 22 5.2 No 52 -2.95 No 0 0 No -21 0.74 Yes 44 14.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 140156528 + NM_015456 NELFB 1 0.45 0.58 29 1.49 74.25 20 5.83 Yes 7 1.2 Yes 0 0 No -19 0.8 Yes 51 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140161701 + NM_015456 NELFB 1 0.1 0.21 12 0.79 0 14 4.02 No 49 -3.46 No 0 0 No -28 0.72 Yes 42 63.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 140164458 + NM_015456 NELFB 1 0.15 0.24 14 -2.48 59.97 59 7.68 Yes 15 0.76 No 0 0 No -27 0.76 Yes 12 58.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 140166335 + NM_015456 NELFB 1 0.48 0.79 42 9.8 87.87 23 5.23 No NA NA NA 0 0 No -21 0.86 Yes 49 94.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140166874 + NM_015456 NELFB 1 0.3 0.56 27 8.85 92.14 26 5.27 No NA NA NA 0 0 No -26 0.59 No 52 36.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140167266 + NM_015456 NELFB 1 0.49 0.4 23 -0.53 0 19 4.58 No 6 0.21 No 0 0 No -18 0.6 No 48 47.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 57561150 + NM_198976 NELFCD 1 1.07 1 46 0.88 81.29 42 7.25 Yes 29 0.37 No 0 0 No -41 0.93 Yes 29 86.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 57564915 + NM_198976 NELFCD 1 0.16 0.26 16 -0.44 65.61 37 6.86 Yes 24 0.98 Yes 0 0 No -36 0.55 No 34 51.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 57565966 + NM_198976 NELFCD 1 0.62 0.74 33 -5.85 80.66 30 6.32 Yes 17 0.79 Yes 0 0 No -29 0.71 Yes 41 72.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 57566418 + NM_198976 NELFCD 1 0.06 0.14 8 3.74 81.28 23 3.92 No 10 0.66 No 0 0 No -22 0.93 Yes 48 91.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 57566775 + NM_198976 NELFCD 1 0.1 0.18 11 7.45 87.91 13 4.99 No 0 1.04 Yes 0 0 No -23 0.62 No 47 74.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 57568536 + NM_198976 NELFCD 1 0.17 0.38 17 7.67 86.94 21 4.87 No 49 1.03 Yes 0 0 No -20 0.57 No 50 65.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 57569736 + NM_198976 NELFCD 1 0.22 0.4 23 1.95 61.46 26 5.05 No 55 1.68 Yes 0 0 No -25 0.5 No 45 55.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50251425 - NM_001301732 NEMF 1 0.21 0.28 18 0.78 0 10 4 No 14 0.3 No 0 0 No -26 0.92 Yes 44 91.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50252014 - NM_001301732 NEMF 1 0.5 0.49 26 6.78 90.04 13 4.97 No 34 1.68 Yes 0 0 No -24 0.39 No 43 46.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50253501 - NM_001301732 NEMF 1 0.15 0.21 10 7.95 79.15 72 8.47 Yes 15 0.59 No 29 0.92 Yes -30 0.68 Yes 40 68.44 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 50263047 - NM_001301732 NEMF 1 0.91 0.9 41 4.54 75.77 49 6.28 Yes 13 1.5 Yes 26 0.93 Yes -26 0.54 No 45 60.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 50264181 - NM_001301732 NEMF 1 0.15 0.17 12 3.58 80.12 25 7.48 Yes 12 1.27 Yes 0 0 No -24 0.94 Yes 46 93.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50264184 - NM_001301732 NEMF 1 0.19 0.18 12 6.73 85.02 22 7.28 Yes 9 1.3 Yes 21 0.87 Yes -21 0.92 Yes 49 93.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 50266659 - NM_001301732 NEMF 1 0.26 0.35 18 6.21 83.26 27 5.29 No 36 0.49 No 0 0 No -26 0.39 No 44 36.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50269288 - NM_001301732 NEMF 1 0.29 0.32 15 2.01 0 18 5.76 Yes 5 1.21 Yes 0 0 No -24 0.81 Yes 46 78.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50281526 - NM_001301732 NEMF 1 0.71 0.61 30 2.98 81.62 21 4.97 No 62 1.19 Yes 20 0.89 Yes -20 0.87 Yes 50 93.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 50285140 - NM_001301732 NEMF 1 0.4 0.4 22 5.65 88.53 25 5.52 No 65 0.44 No 24 0.75 Yes -24 0.74 Yes 46 69.18 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 50287175 - NM_001301732 NEMF 1 4.42 3.92 67 4.43 78.63 16 5.03 No 44 -4.26 No 26 0.4 Yes -23 0.73 Yes 47 74.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 50295091 - NM_001301732 NEMF 1 0.08 0.11 8 2.75 65.24 30 5.6 Yes 70 1.04 Yes 20 0.85 Yes -29 0.66 Yes 41 62.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 50295504 - NM_001301732 NEMF 1 0.17 0.18 11 -3.02 77.27 27 5.56 Yes 44 0.26 No 0 0 No -26 0.84 Yes 44 86.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50295506 - NM_001301732 NEMF 1 10.07 9.9 72 1.65 79.22 25 5.38 No 42 0.27 No 24 0.93 Yes -24 0.83 Yes 46 87.53 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 50299345 - NM_001301732 NEMF 1 0.12 0.15 9 4.17 71.64 20 4.9 No -3 0.64 No 0 0 No -19 0.54 No 51 61.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50300186 - NM_001301732 NEMF 1 1.34 1.24 42 8.18 93.38 24 5.1 No 63 0.99 Yes 0 0 No -23 0.9 Yes 47 77.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50301132 - NM_001301732 NEMF 1 0.15 0.18 10 5.78 74.31 16 4.22 No 43 0.66 No 0 0 No -19 0.91 Yes 51 93.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50304202 - NM_001301732 NEMF 1 1.69 2.07 61 10.45 86.79 25 8.29 Yes 12 0.62 No 0 0 No -24 0.78 Yes 46 63.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 50307535 - NM_001301732 NEMF 1 1.05 0.83 35 4.4 72.83 18 4.24 No 61 1.08 Yes 0 0 No -25 0.65 No 48 57.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50318383 - NM_001301732 NEMF 1 0.09 0.14 8 -13.36 0 31 6 Yes 65 1.31 Yes 0 0 No -30 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 57455449 - NM_001130963 NEMP1 1 1.92 0.97 44 5.72 90.92 28 5.29 No 58 0.59 No 0 0 No -27 0.67 Yes 43 61.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 57457113 - NM_001130963 NEMP1 1 0.38 0.32 19 5.01 86.68 20 4.9 No 16 1.27 Yes 0 0 No -19 0.91 Yes 51 83.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57458520 - NM_001130963 NEMP1 1 0.22 0.11 7 -1.93 75.56 28 6.26 Yes 15 0.02 No 0 0 No -27 0.87 Yes 43 90.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57466664 - NM_001130963 NEMP1 1 1.36 0.78 38 4.95 84.19 24 6.06 Yes 47 0.76 No 0 0 No -23 0.74 Yes 47 87.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57470730 - NM_001130963 NEMP1 1 0.35 0.17 12 9.57 77.28 39 5.64 Yes 31 0.81 Yes 0 0 No -43 0.94 Yes 27 97.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 191381065 - NM_001142645 NEMP2 1 0.79 0.28 14 5.58 81.85 26 7.07 Yes 72 0.29 No 25 0.92 Yes -25 0.84 Yes 45 90.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 191382363 - NM_001142645 NEMP2 1 0.27 0.14 9 3.95 63.18 26 5.48 No 76 0.76 No 29 0.75 Yes -25 0.87 Yes 45 89.66 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 191383749 - NM_001142645 NEMP2 1 10.86 4.07 68 5.36 81.28 32 5.49 No 62 -5.71 No 31 0.88 Yes -31 0.68 Yes 39 71.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 212615887 + NM_013349 NENF 1 0.76 0.39 20 10.23 85.66 17 5.02 No 74 1.25 Yes 27 0.37 Yes -27 0.6 No 40 55.99 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 112724790 - NM_001319110 NEPRO 1 2.4 2.97 66 6.47 86.35 38 7.19 Yes 54 -3.01 No 0 0 No -40 0.48 No 48 47.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 112724878 - NM_001319110 NEPRO 1 0.73 0.89 38 0.78 0 28 5.83 Yes 38 -1.56 No 33 0.61 Yes -27 0.76 Yes 43 80.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 112728432 - NM_001319110 NEPRO 1 0.08 0.14 8 5.76 80.11 29 5.74 Yes 16 0.24 No 28 0.93 Yes -28 0.92 Yes 42 97.55 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 112729549 - NM_001319110 NEPRO 1 0.16 0.25 14 -1.39 64.71 38 6.63 Yes 25 0.61 No 0 0 No -37 0.62 No 33 79.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 112736450 - NM_001319110 NEPRO 1 439.45 64.19 72 5.97 88.11 21 4.89 No 14 1.07 Yes 20 0.91 Yes -20 0.77 Yes 50 60.01 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 5475317 + NM_001047160 NET1 1 0.38 0.19 14 9.15 85.81 24 6.44 Yes 11 1.63 Yes 0 0 No -27 0.64 No 43 77.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 5485717 + NM_001047160 NET1 1 1.14 0.67 34 2.07 70.9 47 6.95 Yes 62 0.33 No 0 0 No -46 0.54 No 24 84.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 5485746 + NM_001047160 NET1 1 0.25 0.13 8 8.36 81.28 33 6.15 Yes 63 0.12 No 0 0 No -29 0.35 No 47 32.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 47117973 - NM_018092 NETO2 1 0.21 0.36 17 7.76 84.44 14 6.3 Yes 66 -1.49 No 0 0 No -26 0.86 Yes 44 91.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 47134892 - NM_018092 NETO2 1 8.97 11.01 72 10.54 88.97 31 7.14 Yes 18 1.14 Yes 0 0 No -30 0.8 Yes 40 70.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 47143185 - NM_018092 NETO2 1 0.2 0.24 16 4.04 85.55 14 5.64 Yes 1 0.62 No 0 0 No -28 0.54 No 14 32.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 47160104 - NM_018092 NETO2 1 0.15 0.32 21 6.39 88.9 21 4.87 No 38 0.51 No 0 0 No -23 0.46 No 47 57.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 47162362 - NM_018092 NETO2 1 1.89 3.69 67 11.11 81.26 24 5.87 Yes 53 -2.44 No 0 0 No -23 0.46 No 47 70.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 47168322 - NM_018092 NETO2 1 0.87 0.93 38 6.18 83.55 67 11.56 Yes 54 1.57 Yes 0 0 No -33 0.72 Yes 37 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 74701007 + NM_006656 NEU3 1 2.66 0.78 32 9.03 85.02 24 6.56 Yes 11 1.03 Yes 23 0.89 Yes -23 0.84 Yes 47 83.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 74705555 + NM_006656 NEU3 1 0.36 0.11 8 -0.96 77.57 24 5.44 No 11 0.91 Yes 0 0 No -23 0.87 Yes 47 86.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 74715349 + NM_006656 NEU3 1 1.59 0.93 42 9.35 87.82 25 5.44 No 56 0.15 No 24 0.69 Yes -24 0.65 No 46 81.81 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 7220077 - NM_001005408 NEURL4 1 0.87 0.25 12 4.38 85.02 17 5.74 Yes 4 0.31 No 0 0 No -27 0.39 No 44 66.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7220702 - NM_001005408 NEURL4 1 1.08 0.39 22 1.43 76.8 22 5 No 33 -1.95 No 0 0 No -21 0.53 No 49 22.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7221004 - NM_001005408 NEURL4 1 2.98 1.06 46 2.53 79.11 20 4.9 No 73 0.69 No 19 0.8 Yes -19 0.66 No 51 75.04 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 7221249 - NM_001005408 NEURL4 1 1.71 0.85 41 -1.99 68.51 16 5.7 Yes 3 1.4 Yes 26 0.55 Yes -27 0.52 No 43 60.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 7222011 - NM_001005408 NEURL4 1 2.56 0.88 37 -4.32 0 16 5.29 No 3 0.89 Yes 21 0.43 Yes -15 0.54 No 46 33.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 7222543 - NM_001005408 NEURL4 1 0.39 0.13 9 -2.68 60.96 13 4.3 No -3 -0.81 No 24 0.65 Yes -26 0.65 No 58 42.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7227054 - NM_001005408 NEURL4 1 0.27 0.11 8 1.92 79.29 24 4.99 No 56 1.29 Yes 19 0.93 Yes -24 0.48 No 46 42.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 7227586 - NM_001005408 NEURL4 1 4.34 1.9 55 3.88 0 29 5.48 No 23 1.99 Yes 24 0.95 Yes -28 0.82 Yes 42 82.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7227607 - NM_001005408 NEURL4 1 7.45 3.07 64 6.21 82.49 15 5.92 Yes 2 2.03 Yes 24 0.95 Yes -25 0.54 No 42 50.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 7227929 - NM_001005408 NEURL4 1 0.32 0.17 11 7.52 89.95 24 5.2 No 72 1.34 Yes 0 0 No -22 0.9 Yes 48 92.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7230230 - NM_001005408 NEURL4 1 0.63 0.29 19 4.83 83.34 17 4.09 No 4 0.79 Yes 22 0.84 Yes -22 0.7 Yes 48 73.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7230532 - NM_001005408 NEURL4 1 0.5 0.14 8 6.21 75.1 14 5.2 No 42 1.7 Yes 0 0 No -54 0.47 No 50 54.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29422865 + NM_001042492 NF1 1 0.47 0.19 11 6.17 77.27 27 5.74 Yes 44 1.72 Yes 0 0 No -26 0.82 Yes 44 80.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29422895 + NM_001042492 NF1 1 0.29 0.11 7 7.5 76.65 21 6 Yes 74 1.74 Yes 0 0 No -20 0.64 No 50 56.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29455154 + NM_001042492 NF1 1 0.85 0.31 18 11.15 88.27 30 7.81 Yes 17 1.57 Yes 0 0 No -29 0.89 Yes 41 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29463066 + NM_001042492 NF1 1 1.3 0.5 27 4.6 80.62 34 6.47 Yes 21 1.32 Yes 0 0 No -34 0.57 No 46 55.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29468343 + NM_001042492 NF1 1 0.49 0.18 11 12.44 92.63 23 6.08 Yes 10 1.36 Yes 0 0 No -22 0.9 Yes 48 88.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29473912 + NM_001042492 NF1 1 1.27 0.54 24 6.8 88.84 21 4.9 No 14 0.29 No 0 0 No -20 0.79 Yes 50 71.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29486029 + NM_001042492 NF1 1 0.35 0.28 17 0.54 81.79 34 7.06 Yes 21 1.62 Yes 0 0 No -33 0.73 Yes 37 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29487128 + NM_001042492 NF1 1 0.14 0.11 7 1.85 0 31 6.49 Yes 69 1 Yes 0 0 No -33 0.37 No 37 52.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29489879 + NM_001042492 NF1 1 0.12 0.11 7 2.76 79.47 21 4.35 No 72 1.09 Yes 0 0 No -20 0.43 No 46 47.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29491066 + NM_001042492 NF1 1 1.67 0.92 40 8.19 83.89 33 6.08 Yes -2 0.2 No 0 0 No -32 0.9 Yes 38 92.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29534168 + NM_001042492 NF1 1 1.18 1.11 46 4.24 69.13 66 7.79 Yes 53 0.93 Yes 0 0 No -37 0.72 Yes 33 82.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29552115 + NM_001042492 NF1 1 5.29 3 65 7.16 98.64 30 4.82 No 17 0.9 Yes 0 0 No -23 0.9 Yes 47 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29563552 + NM_001042492 NF1 1 0.2 0.19 12 6.14 88.68 22 6.24 Yes 52 1.48 Yes 0 0 No -21 0.97 Yes 49 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29573363 + NM_001042492 NF1 1 0.29 0.28 14 6.87 90.41 21 4.97 No 62 1.06 Yes 0 0 No -24 0.88 Yes 46 91.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29575977 + NM_001042492 NF1 1 0.51 0.44 24 -5 0 15 3.83 No 21 0.65 No 26 0.65 Yes -40 0.36 No 30 69.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 29576972 + NM_001042492 NF1 1 13.39 4.42 69 12.78 90.44 37 5.86 Yes 74 -3.91 No 26 0.62 Yes -36 0.51 No 37 55.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 29584704 + NM_001042492 NF1 1 1.05 0.38 21 10.46 92.09 20 5.1 No 7 0.48 No 19 0.25 Yes -22 0.23 No 51 65.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 29584704 + NM_001042492 NF1 1 1.12 0.42 21 10.46 92.09 20 5.1 No 7 0.48 No 19 0.25 Yes -22 0.23 No 51 65.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 29588711 + NM_001042492 NF1 1 0.16 0.14 7 3.12 80.82 29 4.53 No 2 1.39 Yes 19 0.92 Yes -28 0.63 No 42 50.92 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 29588714 + NM_001042492 NF1 1 0.53 0.4 22 3.8 82.95 32 4.7 No 5 1.41 Yes 19 0.92 Yes -31 0.53 No 46 43.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 29657318 + NM_001042492 NF1 1 0.14 0.11 8 1.66 0 34 5.85 Yes 21 0.23 No 30 0.57 Yes -29 0.39 No 41 51.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 29657439 + NM_001042492 NF1 1 0.29 0.19 10 6.49 74.82 29 6.49 Yes 66 -3.58 No 0 0 No -29 0.47 No 42 57.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 29661681 + NM_001042492 NF1 1 0.49 0.39 21 6.33 86.01 29 7.5 Yes 0 0.31 No 28 0.92 Yes -28 0.95 Yes 42 95.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 29664388 + NM_001042492 NF1 1 0.49 0.21 14 -0.65 77.03 43 6.8 Yes 30 1.12 Yes 0 0 No -42 0.46 No 28 58.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29664500 + NM_001042492 NF1 1 0.42 0.15 8 8.63 84.01 33 4.92 No 71 1.4 Yes 0 0 No -27 0.87 Yes 43 87.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29667598 + NM_001042492 NF1 1 0.19 0.13 9 1.46 75.7 22 4.85 No 9 0.02 No 0 0 No -21 0.89 Yes 49 83.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29672406 + NM_001042492 NF1 1 1.36 1.18 50 11.93 83.9 24 5.09 No 11 0.18 No 0 0 No -24 0.89 Yes 46 72.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29674537 + NM_001042492 NF1 1 0.13 0.13 8 3.45 83.07 22 5.09 No 52 1.32 Yes 0 0 No -21 0.7 Yes 49 66.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 29689305 + NM_001042492 NF1 1 1.21 0.86 46 8.05 93.81 20 5.03 No 44 -2.53 No 0 0 No -20 0.67 Yes 50 71.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29694242 + NM_001042492 NF1 1 0.21 0.15 10 6.14 77.28 33 8.7 Yes 20 1.36 Yes 32 0.88 Yes -32 0.94 Yes 38 96.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 30024646 + NM_181832 NF2 1 1.21 1.07 47 2.82 0 36 7.07 Yes 23 1.68 Yes 0 0 No -35 0.81 Yes 35 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 30033372 + NM_181832 NF2 1 0.18 0.18 7 10.52 93.29 25 5.39 No 12 0.14 No 0 0 No -24 0.7 Yes 46 75.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 30050963 + NM_181832 NF2 1 0.24 0.18 12 7.39 88.95 20 5.1 No 19 0.73 No 0 0 No -19 0.71 Yes 51 76.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 69602397 + NM_173215 NFAT5 1 86.89 31.49 72 11.76 93.61 21 5.87 Yes 8 1.68 Yes 20 0.71 Yes -20 0.56 No 50 79.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 69621159 + NM_173215 NFAT5 1 0.4 0.15 9 7.25 85.86 25 7.28 Yes 12 1.45 Yes 0 0 No -24 0.92 Yes 46 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 69642287 + NM_173215 NFAT5 1 0.65 0.24 12 9.28 87.97 21 5.2 No 8 1.29 Yes 0 0 No -20 0.88 Yes 50 86.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 69647801 + NM_173215 NFAT5 1 2.63 0.89 42 5.12 87.12 17 4.07 No 68 1.2 Yes 0 0 No -28 0.48 No 42 46.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69665573 + NM_173215 NFAT5 1 3.23 0.65 31 4.91 92.5 26 5.1 No 57 1 Yes 0 0 No -25 0.68 Yes 45 66.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 69674046 + NM_173215 NFAT5 1 0.83 0.17 11 6.12 70.61 23 6.21 Yes 1 0.71 No 0 0 No -22 0.76 Yes 48 60.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 69678699 + NM_173215 NFAT5 1 37.97 7.26 72 8.73 82.15 58 8.86 Yes 16 1.03 Yes 28 0.84 Yes -28 0.7 Yes 42 60.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 69683342 + NM_173215 NFAT5 1 0.71 0.61 28 6.75 77.41 49 6.85 Yes 23 1.76 Yes 0 0 No -35 0.61 No 35 65.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69690379 + NM_173215 NFAT5 1 0.19 0.14 10 3.01 0 40 9.08 Yes 42 0.94 Yes 0 0 No -28 0.66 No 42 66.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69718792 + NM_173215 NFAT5 1 63.2 27.86 72 2.61 87.4 20 6.08 Yes 7 1.15 Yes 20 0.28 Yes -23 0.42 No 47 63.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 69724637 + NM_173215 NFAT5 1 0.15 0.14 8 -2.29 0 16 3.87 No 15 0.35 No 0 0 No -28 0.37 No 42 77.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 77225682 + NM_172390 NFATC1 1 1.99 0.78 36 9.75 85.07 30 6 Yes 59 0.84 Yes 0 0 No -29 0.41 No 38 69.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 50007528 - NM_012340 NFATC2 1 1.58 0.56 30 12.01 95.04 30 5.46 No 17 0.93 Yes 0 0 No -29 0.69 Yes 41 66.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 50038017 - NM_012340 NFATC2 1 0.51 0.13 8 8.77 81.82 26 6.77 Yes 13 0.98 Yes 0 0 No -25 0.79 Yes 45 83.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 50051834 - NM_012340 NFATC2 1 0.32 0.18 12 -3.96 80.18 23 5.2 No 24 0.51 No 0 0 No -22 0.91 Yes 48 96.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 50122315 - NM_012340 NFATC2 1 0.79 0.4 23 9.13 82.77 28 6.99 Yes 15 1.75 Yes 0 0 No -27 0.97 Yes 43 97.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 50140136 - NM_012340 NFATC2 1 7.09 1.57 55 8.8 87.25 14 6.27 Yes 1 0.79 Yes 28 0.6 Yes -28 0.6 No 42 42.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 50140647 - NM_012340 NFATC2 1 0.67 0.17 7 3.9 77.85 35 5.64 Yes 58 0.75 No 0 0 No -35 0.74 Yes 35 82.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 28964083 + NM_032815 NFATC2IP 1 0.14 0.19 14 10.86 88.27 36 5.15 No 17 1.05 Yes 0 0 No -29 0.93 Yes 41 91.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28965887 + NM_032815 NFATC2IP 1 0.18 0.25 16 -1.33 76.72 75 6.66 Yes 62 2.2 Yes 26 0.31 Yes -35 0.6 No 35 85.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 28967337 + NM_032815 NFATC2IP 1 0.13 0.18 9 4.51 73.41 29 6.92 Yes NA NA NA 0 0 No -31 0.66 No 39 82.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 28977495 + NM_032815 NFATC2IP 1 0.31 0.36 23 7.68 80.12 27 4.68 No 38 0.54 No 0 0 No -26 0.75 Yes 44 82.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68127258 + NM_004555 NFATC3 1 0.38 0.17 9 8.48 93.22 23 5 No 10 1.29 Yes 0 0 No -22 0.9 Yes 48 95.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68159840 + NM_004555 NFATC3 1 0.06 0.1 7 3.57 86.9 27 5.2 No 50 0.5 No 0 0 No -26 0.43 No 14 38.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68165762 + NM_004555 NFATC3 1 0.13 0.13 7 4.61 76.75 24 5.34 No 11 1.88 Yes 0 0 No -23 0.56 No 47 62.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68172413 + NM_004555 NFATC3 1 1.81 2.06 62 6.2 78.79 39 5.81 Yes 67 0.89 Yes 31 0.67 Yes -31 0.63 No 39 67.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 68181410 + NM_004555 NFATC3 1 0.11 0.13 7 2.81 70.89 45 8.8 Yes 32 0.84 Yes 0 0 No -19 0.27 No 20 41.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68191861 + NM_004555 NFATC3 1 1.63 1.92 57 6.43 82.46 33 5.91 Yes 2 0.92 Yes 0 0 No -22 0.92 Yes 48 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68208281 + NM_004555 NFATC3 1 0.11 0.13 7 -4.78 0 48 7.91 Yes 35 1.36 Yes 0 0 No -47 0.38 No 23 66.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68209902 + NM_004555 NFATC3 1 0.38 0.36 20 3.03 83.28 25 8.45 Yes 12 1.84 Yes 0 0 No -24 0.77 Yes 46 60.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68251613 + NM_004555 NFATC3 1 12.51 0.81 37 13.12 86.09 27 5.74 Yes 50 0.27 No 26 0.64 Yes -26 0.84 Yes 44 68.84 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 68255098 + NM_004555 NFATC3 1 181.96 12.57 72 5.57 69.5 28 5.52 No 15 1.33 Yes 27 0.9 Yes -27 0.8 Yes 43 83.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 68251613 + NM_004555 NFATC3 1 5.01 0.36 18 13.12 86.09 27 5.74 Yes 50 0.27 No 26 0.64 Yes -26 0.84 Yes 44 68.84 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 68255098 + NM_004555 NFATC3 1 12.07 0.72 37 5.57 69.5 28 5.52 No 15 1.33 Yes 27 0.9 Yes -27 0.8 Yes 43 83.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 68255133 + NM_004555 NFATC3 1 5.71 0.44 25 4.91 81.97 21 4.49 No 50 1.34 Yes 0 0 No -27 0.73 Yes 43 85.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46133780 + NM_003204 NFE2L1 1 6.76 14.54 72 5.75 87.21 22 4.37 No 34 0.66 No 21 0.89 Yes -21 0.92 Yes 49 92.35 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 46134715 + NM_003204 NFE2L1 1 0.09 0.1 7 1.72 0 13 4.36 No 20 0.7 No 0 0 No -32 0.7 Yes 38 75.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 46135129 + NM_003204 NFE2L1 1 0.08 0.24 13 11.55 95.47 41 6.83 Yes 41 0.08 No 0 0 No -29 0.44 No 46 67.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 46135203 + NM_003204 NFE2L1 1 0.09 0.31 17 4.38 76.65 23 5.46 No 64 -4.88 No 0 0 No -22 0.5 No 48 68.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 46135947 + NM_003204 NFE2L1 1 0.08 0.26 16 7.2 86.14 25 5.38 No 12 1.29 Yes 0 0 No -24 0.83 Yes 46 93.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46136248 + NM_003204 NFE2L1 1 0.16 0.49 24 0.91 0 85 9.27 Yes 72 2.07 Yes 0 0 No -42 0.41 No 37 14.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 178096759 - NM_001313903 NFE2L2 1 0.78 1.67 54 3.79 78.1 17 7.61 Yes 35 -3.87 No 28 0.81 Yes -24 0.62 No 46 59.21 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 178097291 - NM_001313903 NFE2L2 1 0.07 0.14 10 4.11 74.13 30 4.43 No 57 1.08 Yes 23 0.63 Yes -32 0.49 No 38 62.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 26224131 + NM_004289 NFE2L3 1 0.17 0.15 10 1.03 72.92 27 5.19 No 73 -4.91 No 24 0.85 Yes -26 0.69 Yes 44 79.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 26224183 + NM_004289 NFE2L3 1 0.34 0.32 18 4.95 95.59 24 4.9 No 50 0.43 No 0 0 No -23 0.97 Yes 47 98.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 3435083 + NM_001245002 NFIC 1 0.82 0.42 20 -15.65 58.85 34 6.08 Yes 21 1.95 Yes 0 0 No -33 0.86 Yes 37 81.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3457880 + NM_001245002 NFIC 1 1.45 0.78 33 11.72 89.69 25 5.57 Yes 12 0.91 Yes 24 0.88 Yes -25 0.72 Yes 46 59.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 3462806 + NM_001245002 NFIC 1 0.31 0.14 7 8.9 86.46 38 6.56 Yes 47 -0.07 No 0 0 No -38 0.81 Yes 32 89.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103447262 + NM_001319226 NFKB1 1 0.05 0.17 12 9.82 86.35 26 8.13 Yes 19 1.26 Yes 0 0 No -31 0.53 No 39 66.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 103455001 + NM_001319226 NFKB1 1 154.12 251.25 72 8.08 85.99 41 6.71 Yes 28 1.58 Yes 40 0.13 Yes -40 0.9 Yes 30 96.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 103460663 + NM_001319226 NFKB1 1 0.07 0.31 17 7.63 88.77 23 5.2 No 36 0.26 No 0 0 No -26 0.5 No 44 51.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103503729 + NM_001319226 NFKB1 1 0.38 1.5 48 9.78 92.26 32 8.05 Yes 19 1.54 Yes 0 0 No -31 0.9 Yes 39 93.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 103505910 + NM_001319226 NFKB1 1 0.52 2.14 61 5.78 84.1 25 4.91 No 45 -2.71 No 0 0 No -25 0.83 Yes 45 77.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103514910 + NM_001319226 NFKB1 1 0.03 0.1 7 3.93 77.21 33 6.01 Yes 41 0.85 Yes 0 0 No -32 0.62 No 38 58.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 103517987 + NM_001319226 NFKB1 1 0.2 0.79 38 8.03 77.97 26 5.38 No 24 0.42 No 0 0 No -25 0.97 Yes 45 96.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103518691 + NM_001319226 NFKB1 1 0.53 2.11 57 3.24 79.3 13 4.61 No 0 1.12 Yes 0 0 No -19 0.93 Yes 51 96.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 103522775 + NM_001319226 NFKB1 1 0.21 0.81 35 4.09 91.2 19 5 No 40 -2.79 No 0 0 No -24 0.77 Yes 46 76.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103528267 + NM_001319226 NFKB1 1 0.03 0.11 7 -4.41 0 24 5.2 No 40 0.94 Yes 24 0.9 Yes -23 0.64 No 22 54.6 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 103531737 + NM_001319226 NFKB1 1 0.09 0.26 14 -5.12 0 16 3.87 No 3 0.32 No 0 0 No -30 0.63 No 40 79.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 103537566 + NM_001319226 NFKB1 1 0.04 0.17 7 3.71 75.3 22 5.1 No 17 0.48 No 22 0.5 Yes -19 0.71 Yes 51 61.22 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 104155993 + NM_001261403 NFKB2 1 1.5 6 72 0.15 71.92 22 5.1 No 9 0.28 No 24 0.78 Yes -21 0.78 Yes 49 65.05 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 104156010 + NM_001261403 NFKB2 1 0.04 0.18 11 -4.74 0 26 4.88 No 26 0.36 No 0 0 No -25 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104156072 + NM_001261403 NFKB2 1 0.05 0.19 12 0.05 68.24 36 6.45 Yes 12 0.52 No 0 0 No -30 0.54 No 40 62.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104156400 + NM_001261403 NFKB2 1 0.06 0.31 19 1.7 0 17 4.36 No 10 -2.09 No 0 0 No -25 0.76 Yes 45 90.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 104156483 + NM_001261403 NFKB2 1 0.07 0.38 20 -10.05 70.19 61 8.83 Yes 48 0.07 No 0 0 No -23 0.54 No 39 63.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104156644 + NM_001261403 NFKB2 1 0.02 0.14 9 1.64 71.46 9 3.26 No -4 1.38 Yes 20 0.97 Yes -23 0.34 No 62 27.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 104157285 + NM_001261403 NFKB2 1 0.69 2.68 65 -4.37 75.51 24 6.08 Yes 11 0.2 No 0 0 No -23 0.92 Yes 47 79.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 104159026 + NM_001261403 NFKB2 1 0.07 0.18 11 9.06 79.36 25 5.92 Yes 42 -1.98 No 22 0.77 Yes -24 0.9 Yes 46 89.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 104159084 + NM_001261403 NFKB2 1 0.09 0.22 15 8.2 82.21 22 4.84 No 70 -0.02 No 0 0 No -35 0.9 Yes 35 91.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 104160423 + NM_001261403 NFKB2 1 0.09 0.38 19 -2.2 0 15 4.58 No 18 0.41 No 0 0 No -20 0.69 Yes 50 41.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104161003 + NM_001261403 NFKB2 1 0.02 0.13 9 5.22 73.56 19 6.65 Yes 6 1.28 Yes 0 0 No -27 0.71 Yes 43 71.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104161181 + NM_001261403 NFKB2 1 0.02 0.11 7 -14.36 0 21 3.25 No 50 -3.06 No 22 0.77 Yes -20 0.42 No 60 41.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 104161211 + NM_001261403 NFKB2 1 0.03 0.15 10 -4.86 0 9 3.87 No 51 -3.17 No 0 0 No -28 0.71 Yes 42 45.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104161377 + NM_001261403 NFKB2 1 0.88 2.78 68 9.73 85.61 29 5.57 Yes 53 1.36 Yes 0 0 No -28 0.89 Yes 42 65.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 104161528 + NM_001261403 NFKB2 1 0.07 0.22 12 5.4 73.95 30 6 Yes 17 0.24 No 0 0 No -29 0.63 No 16 34.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104161781 + NM_001261403 NFKB2 1 0.19 0.57 26 1.76 68.24 13 5.65 Yes 0 1.18 Yes 25 0.9 Yes -58 0.42 No 48 49.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 104161998 + NM_001261403 NFKB2 1 0.06 0.13 7 -0.45 0 23 5.85 Yes 10 1.15 Yes 32 0.83 Yes -22 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 104162008 + NM_001261403 NFKB2 1 85.96 172.08 72 7.15 83.33 33 6.61 Yes 20 1.21 Yes 32 0.83 Yes -32 0.63 No 41 66.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 35871029 - NM_020529 NFKBIA 1 0.01 0.14 7 6.62 82.13 30 6.5 Yes 17 1.01 Yes 0 0 No -29 0.97 Yes 41 97.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35871741 - NM_020529 NFKBIA 1 1.07 13.71 72 4.91 84.48 28 5.19 No 62 1.66 Yes 23 0.89 Yes -23 0.81 Yes 47 92.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 35871741 - NM_020529 NFKBIA 1 0.02 0.19 10 4.91 84.48 28 5.19 No 62 1.66 Yes 23 0.89 Yes -23 0.81 Yes 47 92.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 35871867 - NM_020529 NFKBIA 1 0.01 0.15 10 -10.99 72.9 23 4.64 No 70 0.93 Yes 0 0 No -27 0.83 Yes 43 90.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39395710 + NM_002503 NFKBIB 1 4.75 5.25 70 8.88 84.85 25 5.64 Yes 64 1.88 Yes 24 0.42 Yes -33 0.82 Yes 37 62.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 39395845 + NM_002503 NFKBIB 1 0.11 0.1 7 2.63 0 36 6.93 Yes 23 1.64 Yes 0 0 No -35 0.75 Yes 35 90.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39396117 + NM_002503 NFKBIB 1 0.1 0.14 8 -2.61 62.07 63 7.45 Yes 50 1.27 Yes 0 0 No -44 0.6 No 26 63.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36380607 - NM_001321831 NFKBID 1 0.36 0.18 12 7.37 84.67 28 5.38 No 15 1.97 Yes 0 0 No -27 0.79 Yes 43 85.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36381599 - NM_001321831 NFKBID 1 0.83 0.38 20 6.93 86.16 20 7.14 Yes 7 1.27 Yes 19 0.65 Yes -19 0.83 Yes 51 89.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36384070 - NM_001321831 NFKBID 1 22.03 9.69 72 9.58 87.01 30 5.92 Yes 27 0.52 No 0 0 No -29 0.44 No 41 41.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 44226850 - NM_004556 NFKBIE 1 0.09 0.4 20 7.77 79.44 28 4.25 No 70 0.39 No 19 0.43 Yes -22 0.5 No 48 74.37 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 44226989 - NM_004556 NFKBIE 1 0.04 0.18 12 4.08 70.15 36 6.48 Yes 50 2.28 Yes 0 0 No -35 0.94 Yes 35 76.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 44227593 - NM_004556 NFKBIE 1 0.21 0.85 38 5.31 88.74 18 5.1 No 54 0.98 Yes 0 0 No -26 0.66 No 48 60.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 44228017 - NM_004556 NFKBIE 1 0.09 0.24 15 -14.01 77.89 24 6.56 Yes 11 1.77 Yes 0 0 No -23 0.85 Yes 47 93.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 44229582 - NM_004556 NFKBIE 1 0.18 0.38 21 3.71 0 26 6.63 Yes 13 1.66 Yes 0 0 No -25 0.53 No 42 70.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 101573953 + NM_031419 NFKBIZ 1 0.57 0.25 17 6.07 87.77 21 3.59 No 66 0.13 No 0 0 No -21 0.43 No 49 59.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 129742959 - NM_006165 NFRKB 1 0.32 0.11 7 1.69 0 28 6.16 Yes 52 0.74 No 0 0 No -27 0.62 No 43 57.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 129742988 - NM_006165 NFRKB 1 0.36 0.13 7 -2.73 0 36 6.09 Yes 23 0.74 No 0 0 No -35 0.82 Yes 35 83.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 129744226 - NM_006165 NFRKB 1 0.55 0.19 9 2.17 73.03 28 5.83 Yes 15 0.4 No 0 0 No -27 0.83 Yes 43 88.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 129745404 - NM_006165 NFRKB 1 0.62 0.18 12 4.24 83.62 22 4.9 No 62 -2.57 No 0 0 No -20 0.7 Yes 50 57.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 129745428 - NM_006165 NFRKB 1 0.45 0.13 8 8.07 82.59 25 5.2 No 38 -2.58 No 0 0 No -24 0.63 No 50 75.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 129747278 - NM_006165 NFRKB 1 2.53 1.03 45 -0.77 74.42 27 5.39 No 14 0.43 No 0 0 No -26 0.85 Yes 44 84.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 129748285 - NM_006165 NFRKB 1 0.38 0.18 12 2.73 68.7 21 4.28 No 64 0.12 No 27 0.87 Yes -21 0.81 Yes 49 91.36 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 129750786 - NM_006165 NFRKB 1 0.36 0.13 7 7.06 82.19 29 5.92 Yes 45 -1.4 No 0 0 No -28 0.83 Yes 42 79.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 129752495 - NM_006165 NFRKB 1 1.12 0.35 20 3.25 65.89 24 6.11 Yes 74 1.46 Yes 0 0 No -56 0.47 No 37 46.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 129754742 - NM_006165 NFRKB 1 261.02 24.47 72 6.27 83.96 24 5.19 No 52 1.41 Yes 23 0.94 Yes -23 0.9 Yes 47 93.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 129754991 - NM_006165 NFRKB 1 9.09 0.93 43 10.87 96.69 24 5.29 No 32 1.73 Yes 0 0 No -23 0.71 Yes 47 70.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 129758383 - NM_006165 NFRKB 1 0.59 0.26 17 9.22 84.45 54 8.63 Yes 41 1.03 Yes 29 0.61 Yes -48 0.48 No 22 68.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 34266780 - NR_037570 NFS1 1 0.18 0.13 7 8.91 89.11 30 6.32 Yes 17 0.61 No 0 0 No -25 0.68 Yes 45 73.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 69626744 - NM_015700 NFU1 1 0.89 1.51 53 10.07 88.27 29 6.75 Yes 16 0.68 No 0 0 No -28 0.91 Yes 42 96.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 69657154 - NM_015700 NFU1 1 0.1 0.14 9 2.14 0 37 6 Yes 47 0.72 No 36 0.4 Yes -36 0.72 Yes 34 71.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 33291418 + NM_001318758 NFX1 1 1.61 1.46 56 4.48 65.97 51 6.09 Yes 3 -1.87 No 0 0 No -41 0.58 No 32 69.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 33293650 + NM_001318758 NFX1 1 0.43 0.36 19 8.2 87.98 28 5.7 Yes 15 1.73 Yes 0 0 No -27 0.86 Yes 43 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33293677 + NM_001318758 NFX1 1 0.8 0.67 32 9.25 95.72 30 5.86 Yes 42 1.72 Yes 0 0 No -29 0.65 No 41 73.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 33294565 + NM_001318758 NFX1 1 0.63 0.57 24 10.35 91.71 25 5.09 No 12 1.02 Yes 0 0 No -24 0.84 Yes 46 80.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33315296 + NM_001318758 NFX1 1 0.08 0.11 7 8.9 93.95 21 6.23 Yes 8 0.45 No 0 0 No -29 0.65 No 41 58.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33318891 + NM_001318758 NFX1 1 0.16 0.26 13 1.51 64.16 33 6.07 Yes 48 0.1 No 20 0.87 Yes -32 0.6 No 38 61.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 33338507 + NM_001318758 NFX1 1 543.68 104.54 72 4.58 78.63 47 9.16 Yes 34 1.02 Yes 44 0.04 Yes -46 0.87 Yes 24 91.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 33347660 + NM_001318758 NFX1 1 56.35 45.82 72 3.26 75.76 26 5.15 No 13 0.31 No 25 0.92 Yes -25 0.87 Yes 45 76.56 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 33347663 + NM_001318758 NFX1 1 14.95 11.93 72 5 78.47 29 5.43 No 16 0.33 No 0 0 No -28 0.84 Yes 42 73.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33351613 + NM_001318758 NFX1 1 0.61 0.54 27 6.31 77.93 26 5.95 Yes 13 0.62 No 0 0 No -25 0.67 Yes 45 79.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 47888013 - NM_001278624 NFXL1 1 0.32 0.18 9 1.29 0 26 5.09 No 66 0.47 No 0 0 No -25 0.95 Yes 45 93.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 47888030 - NM_001278624 NFXL1 1 0.64 0.29 15 1.75 88.68 22 5.06 No 49 0.46 No 21 0.78 Yes -21 0.57 No 49 61.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 41057323 + NM_002505 NFYA 1 0.12 0.1 7 -1.87 0 10 3.7 No 61 -1.21 No 0 0 No -34 0.76 Yes 36 78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 41059272 + NM_002505 NFYA 1 0.51 0.4 24 1 0 10 3.61 No 61 2.35 Yes 0 0 No -25 0.39 No 45 46.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 41059284 + NM_002505 NFYA 1 16.72 12.75 72 4.19 0 17 3.51 No 73 2.34 Yes 0 0 No -22 0.76 Yes 48 65.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 41059305 + NM_002505 NFYA 1 0.14 0.11 8 3.69 77.53 17 5.47 No 4 0.41 No 0 0 No -23 0.74 Yes 47 85.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 104514250 - NM_006166 NFYB 1 0.08 0.15 10 0.96 0 11 4.12 No 12 1.19 Yes 0 0 No -28 0.58 No 42 51.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 104525617 - NM_006166 NFYB 1 5.66 6.38 72 8.12 85.26 39 6.56 Yes 26 1.44 Yes 38 0.66 Yes -38 0.9 Yes 32 95.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 41213209 + NM_001142590 NFYC 1 0.2 0.39 22 -3.22 0 46 8.69 Yes 33 0.96 Yes 0 0 No -29 0.9 Yes 41 90.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 41229034 + NM_001142590 NFYC 1 1.98 2.81 64 11.08 92.63 20 6.74 Yes 7 0.98 Yes 32 0.64 Yes -22 0.5 No 38 59.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 41232273 + NM_001142590 NFYC 1 2.21 3.14 66 0.89 0 9 3.87 No 32 0.75 No 30 0.95 Yes -44 0.68 Yes 26 84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 41232589 + NM_001142590 NFYC 1 8.68 12.31 72 6.62 84.14 33 5.99 Yes 5 1.13 Yes 32 0.8 Yes -32 0.89 Yes 38 95.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 41236068 + NM_001142590 NFYC 1 20.16 27.51 72 8.13 84.95 22 6.08 Yes 37 0.05 No 21 0.56 Yes -30 0.66 No 40 83.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 41236383 + NM_001142590 NFYC 1 5.46 7.51 72 3.24 73.03 34 6.29 Yes 21 1.52 Yes 25 0.92 Yes -28 0.85 Yes 42 77.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 25764391 - NM_001145293 NGLY1 1 0.29 0.33 17 8.95 89.23 29 6.24 Yes 16 2.16 Yes 0 0 No -28 0.52 No 42 75.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 25773956 - NM_001145293 NGLY1 1 0.2 0.19 13 0.64 84.98 24 5.08 No 42 1.04 Yes 0 0 No -21 0.76 Yes 47 74.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 25777641 - NM_001145293 NGLY1 1 7.01 0.6 27 5.77 75.57 48 7.55 Yes 35 1.77 Yes 28 0.69 Yes -42 0.61 No 28 85.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 25777641 - NM_001145293 NGLY1 1 1340.75 104.25 72 5.77 75.57 48 7.55 Yes 35 1.77 Yes 28 0.69 Yes -42 0.61 No 28 85.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 25777641 - NM_001145293 NGLY1 1 1.71 0.21 12 5.77 75.57 48 7.55 Yes 35 1.77 Yes 28 0.69 Yes -42 0.61 No 28 85.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 25777884 - NM_001145293 NGLY1 1 4.27 0.38 22 -7.26 0 11 3.23 No 65 1.55 Yes 0 0 No -27 0.33 No 43 40.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 25780973 - NM_001145293 NGLY1 1 0.2 0.28 16 5.45 82.86 29 6.59 Yes 16 0.77 Yes 0 0 No -28 0.68 Yes 42 75.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 25781942 - NM_001145293 NGLY1 1 0.35 0.26 15 9.03 86.29 29 6.37 Yes 16 1.01 Yes 0 0 No -28 0.78 Yes 42 68.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 25789475 - NM_001145293 NGLY1 1 0.44 0.33 19 9.81 78.82 30 7.24 Yes 8 1.23 Yes 0 0 No -29 0.78 Yes 41 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 25791615 - NM_001145293 NGLY1 1 0.13 0.1 7 5.1 68.3 29 8 Yes 16 1.31 Yes 0 0 No -28 0.84 Yes 42 79.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 25800062 - NM_001145293 NGLY1 1 0.41 0.68 30 1.36 0 35 6.78 Yes 66 -4.2 No 0 0 No -34 0.58 No 36 81.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 25803200 - NM_001145293 NGLY1 1 0.72 1.21 46 6.32 80.75 16 6 Yes 35 0.37 No 0 0 No -27 0.55 No 43 66.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 25809912 - NM_001145293 NGLY1 1 0.08 0.13 8 12.12 88.27 27 6.38 Yes 14 2.02 Yes 0 0 No -26 0.75 Yes 44 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 25818884 - NM_001145293 NGLY1 1 0.17 0.28 15 4.74 84.41 42 6.59 Yes 44 -2.6 No 0 0 No -28 0.58 No 36 62.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 25819332 - NM_001145293 NGLY1 1 0.23 0.38 20 13.07 89.38 35 6.65 Yes 22 1.28 Yes 34 0.91 Yes -24 0.64 No 36 72.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 90814829 + NR_028052 NGRN 1 1.25 0.99 40 7.57 76.68 20 5.89 Yes 39 -1.55 No 0 0 No -28 0.73 Yes 42 57.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 219941168 - NM_024782 NHEJ1 1 0.63 0.4 21 0.86 0 13 4.36 No 20 1.53 Yes 0 0 No -32 0.82 Yes 38 90.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219960071 - NM_024782 NHEJ1 1 1.35 0.65 9 -0.49 0 17 3.97 No 19 1.15 Yes 0 0 No -31 0.88 Yes 39 82.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219960078 - NM_024782 NHEJ1 1 0.21 0.13 9 5.75 85.54 25 6.46 Yes 12 1.19 Yes 24 0.9 Yes -24 0.87 Yes 46 82.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 220010627 - NM_024782 NHEJ1 1 1.41 0.85 41 5.95 93.6 28 3.97 No 3 0.81 Yes 0 0 No -27 0.53 No 12 69.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220022373 - NM_024782 NHEJ1 1 0.5 0.25 10 7.88 85.48 17 4.36 No 4 1.53 Yes 0 0 No -28 0.44 No 54 48.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 115619500 + NM_198514 NHLRC2 1 0.7 0.6 32 6.07 88.01 20 4.74 No 17 0.11 No 0 0 No -23 0.85 Yes 47 84.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 115623043 + NM_198514 NHLRC2 1 0.28 0.24 15 5.92 90.49 22 5.19 No 9 0.31 No 0 0 No -21 0.54 No 49 69.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 115625241 + NM_198514 NHLRC2 1 0.18 0.15 9 9.82 88.33 32 5.74 Yes 19 0.16 No 0 0 No -31 0.4 No 39 68.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 115625374 + NM_198514 NHLRC2 1 0.21 0.15 9 10.87 85.86 27 6.73 Yes 14 1.16 Yes 0 0 No -27 0.47 No 44 52.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 115657874 + NM_198514 NHLRC2 1 0.26 0.21 13 -2.1 0 13 3.07 No 13 0.63 No 0 0 No -32 0.32 No 42 29.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 115662263 + NM_198514 NHLRC2 1 0.75 0.4 21 -0.33 68.47 38 6.49 Yes 56 1.54 Yes 0 0 No -37 0.73 Yes 33 53.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 115664589 + NM_198514 NHLRC2 1 0.18 0.21 15 7.42 83.24 24 4.8 No 23 1.23 Yes 0 0 No -38 0.35 No 35 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 115666984 + NM_198514 NHLRC2 1 0.81 0.6 28 6.99 86.37 30 8.17 Yes 36 1.15 Yes 0 0 No -29 0.88 Yes 41 85.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 39616295 + NM_001012754 NHLRC3 1 1.34 0.28 17 2.35 73.54 13 5.66 Yes 0 1.05 Yes 0 0 No -25 0.59 No 45 56.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 39616342 + NM_001012754 NHLRC3 1 2.05 0.47 25 5.27 82.08 13 5 No 47 0.99 Yes 0 0 No -21 0.53 No 49 59.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 177577995 - NM_001034833 NHP2 1 3988.54 760.39 72 10.65 95.25 23 5.2 No 10 0.59 No 22 0.85 Yes -22 0.79 Yes 48 88.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 177578013 - NM_001034833 NHP2 1 1.26 0.22 13 -19.27 0 16 3.96 No 49 -3.03 No 22 0.85 Yes -16 0.39 No 63 30.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 49462445 - NM_032316 NICN1 1 0.75 0.22 12 -3.77 0 12 4.24 No 49 2.38 Yes 0 0 No -27 0.47 No 43 26.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49462448 - NM_032316 NICN1 1 1.21 0.35 23 -4.21 0 9 3.87 No 46 2.38 Yes 0 0 No -58 0.47 No 46 48.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49462490 - NM_032316 NICN1 1 0.44 0.14 9 -1.41 72.77 17 6.24 Yes 4 2.42 Yes 19 0.85 Yes -26 0.4 No 44 63.33 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 49462580 - NM_032316 NICN1 1 0.95 0.32 18 4.44 79.75 20 5.1 No 31 2.33 Yes 19 0.72 Yes -19 0.47 No 46 64.45 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 49463110 - NM_032316 NICN1 1 0.52 0.25 13 5.13 86.21 28 7.32 Yes 15 1.8 Yes 0 0 No -27 0.86 Yes 43 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49463856 - NM_032316 NICN1 1 1.74 0.78 36 3.52 0 9 3.87 No 14 0.47 No 30 0.87 Yes -36 0.54 No 34 58.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 236146813 - NM_002508 NID1 1 0.89 0.1 7 8.52 89.66 24 5.48 No 52 1.01 Yes 0 0 No -23 0.84 Yes 47 87.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 236227548 - NM_002508 NID1 1 1.92 0.35 16 6.03 87.33 21 5.57 Yes 76 1.18 Yes 0 0 No -20 0.62 No 50 90.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 201759509 + NM_001142356 NIF3L1 1 1.25 0.9 36 2.57 82.27 30 5.32 No 46 0.95 Yes 0 0 No -27 0.38 No 43 36.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 122486104 - NM_032390 NIFK 1 0.04 0.22 12 0.71 0 13 4.18 No 12 1.75 Yes 0 0 No -24 0.4 No 46 58.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 122490631 - NM_032390 NIFK 1 0.08 0.13 7 3.46 87.29 27 4.97 No 47 0.71 No 0 0 No -26 0.69 Yes 44 66.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 122493231 - NM_032390 NIFK 1 0.39 0.79 41 7.02 85.4 14 5.46 No 29 0.83 Yes 23 0.46 Yes -32 0.31 No 43 36.59 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 51196463 - NM_182944 NIN 1 0.17 0.58 30 -4.65 0 11 4.12 No 58 0.45 No 26 0.95 Yes -10 0.2 No 60 28.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 51198244 - NM_182944 NIN 1 0.08 0.24 12 4.74 84.41 27 7.21 Yes 14 1.34 Yes 0 0 No -26 0.86 Yes 44 90.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 51206158 - NM_182944 NIN 1 0.06 0.17 9 0.13 68.75 24 4.79 No 57 0.23 No 0 0 No -23 0.76 Yes 47 54.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 51206204 - NM_182944 NIN 1 0.3 0.88 38 -4.08 71.44 24 5.93 Yes 59 0.73 No 0 0 No -23 0.89 Yes 47 88.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 51206231 - NM_182944 NIN 1 0.14 0.4 22 2.45 0 22 4.53 No 32 0.73 No 21 0.9 Yes -21 0.44 No 53 59.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 51206243 - NM_182944 NIN 1 0.08 0.21 13 -0.82 67 22 4.78 No 20 0.73 No 21 0.9 Yes -21 0.9 Yes 49 73.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 51208441 - NM_182944 NIN 1 0.21 0.71 34 -3.5 0 16 3.87 No 16 0.32 No 0 0 No -29 0.37 No 38 40.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 51208597 - NM_182944 NIN 1 0.08 0.26 16 5.45 75.81 41 6.1 Yes 7 0.22 No 0 0 No -29 0.67 Yes 41 76.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 51219499 - NM_182944 NIN 1 0.16 0.61 28 10.73 86.44 24 6.69 Yes 11 1.52 Yes 0 0 No -23 0.57 No 47 64.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 51228691 - NM_182944 NIN 1 0.25 0.6 29 6.99 84.54 21 5.05 No 26 0.53 No 0 0 No -25 0.7 Yes 45 74.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 51257420 - NM_182944 NIN 1 0.04 0.11 8 7.05 87.06 24 6.08 Yes 19 0.53 No 0 0 No -23 0.88 Yes 47 95.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 51258980 - NM_182944 NIN 1 0.78 2.61 64 7.18 81.83 26 5.47 No -1 0.18 No 25 0.84 Yes -25 0.64 No 45 66.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 51261244 - NM_182944 NIN 1 0.04 0.14 10 6.1 74.76 39 4.71 No 72 1.49 Yes 27 0.4 Yes -33 0.38 No 37 52.01 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 51265963 - NM_182944 NIN 1 0.05 0.18 11 12.01 88.71 29 5.83 Yes 29 1.74 Yes 0 0 No -31 0.75 Yes 39 86.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 51272995 - NM_182944 NIN 1 0.13 0.49 27 5.07 73.47 24 6.49 Yes 11 0.36 No 0 0 No -29 0.5 No 41 68.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95888868 - NM_004148 NINJ1 1 0.4 0.32 13 -0.02 67.26 15 5.7 Yes 60 2.21 Yes 23 0.61 Yes -20 0.73 Yes 50 41.87 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 95893824 - NM_004148 NINJ1 1 0.2 0.17 12 9.34 80.35 22 5.65 Yes 62 -2.71 No 25 0.69 Yes -25 0.78 Yes 46 77.68 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 69374652 + NM_016101 NIP7 1 0.11 0.13 9 7.35 82.92 78 9.59 Yes 65 2.47 Yes 0 0 No -29 0.79 Yes 41 66.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 69375405 + NM_016101 NIP7 1 0.06 0.15 8 1.25 73.7 27 4.95 No 14 -1.24 No 19 0.31 Yes -26 0.74 Yes 13 61.44 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 69375413 + NM_016101 NIP7 1 0.29 0.76 26 -9.66 0 16 4.12 No 22 -1.74 No 19 0.31 Yes -10 0.3 No 60 51.37 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 23053781 - NM_144599 NIPA1 1 3.48 1.57 49 9.61 76.19 24 4.01 No 75 1.3 Yes 23 0.85 Yes -23 0.66 No 47 83.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 23058679 - NM_144599 NIPA1 1 0.45 0.17 11 4.02 80.12 23 6.3 Yes 10 1.27 Yes 0 0 No -22 0.8 Yes 48 78.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 23058682 - NM_144599 NIPA1 1 2.51 1.11 44 5.5 85.02 20 6.14 Yes 7 1.29 Yes 0 0 No -30 0.7 Yes 51 65.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 23058986 - NM_144599 NIPA1 1 17.62 7.26 72 9.49 87.05 32 5.26 No 6 1.09 Yes 31 0.81 Yes -31 0.87 Yes 39 95.49 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 23059436 - NM_144599 NIPA1 1 1.42 0.58 29 7.08 83.17 36 6.68 Yes 23 1.23 Yes 23 0.84 Yes -31 0.42 No 39 67.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 23060929 - NM_144599 NIPA1 1 0.3 0.18 11 -1.17 59.97 12 5.2 No 70 -5.1 No 22 0.66 Yes -25 0.63 No 59 67.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 23085963 - NM_144599 NIPA1 1 0.44 0.22 13 9.02 85.45 27 7.19 Yes 33 0.75 No 0 0 No -26 0.67 Yes 44 81.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 23017568 - NM_001008894 NIPA2 1 1.64 0.18 11 5.9 85.04 20 4.44 No 33 0.86 Yes 0 0 No -23 0.96 Yes 47 95.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 23019857 - NM_001008894 NIPA2 1 1502.81 173.65 72 8.76 94.12 21 5.82 Yes 8 0.13 No 29 0.36 Yes -29 0.42 No 41 44.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 23026120 - NM_001008894 NIPA2 1 0.83 0.67 30 5.5 90.92 28 5.24 No 62 1.2 Yes 0 0 No -27 0.66 No 43 45.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 23027923 - NM_001008894 NIPA2 1 17.31 13.5 72 7.85 93.6 26 4.68 No 43 0.32 No 26 0.86 Yes -26 0.91 Yes 44 93.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 23029967 - NM_001008894 NIPA2 1 0.41 0.26 17 5.76 81.22 30 5.73 Yes 41 0.52 No 0 0 No -27 0.48 No 36 44.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 23033414 - NM_001008894 NIPA2 1 91 69.32 72 11.58 91.22 43 6.11 Yes 30 1.32 Yes 24 0.69 Yes -24 0.52 No 46 48.84 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 23034007 - NM_001008894 NIPA2 1 1.93 1.47 51 5.92 77.75 25 5.48 No 12 0.79 Yes 24 0.93 Yes -24 0.89 Yes 46 81.09 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 99205641 - NR_135746 NIPAL2 1 0.78 0.19 10 -9.56 47.52 49 7.08 Yes 13 -2.39 No 25 0.55 Yes -48 0.34 No 22 67.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 99205644 - NR_135746 NIPAL2 1 0.93 0.26 13 -6.97 54.56 46 6.88 Yes 46 -2.35 No 25 0.55 Yes -45 0.36 No 25 70.7 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 99207012 - NR_135746 NIPAL2 1 0.63 0.22 12 -0.37 77.25 44 6.92 Yes 31 0.61 No 0 0 No -43 0.75 Yes 27 97.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 99228062 - NR_135746 NIPAL2 1 0.36 0.13 7 7.74 88.16 35 6.83 Yes 30 0.43 No 0 0 No -24 0.39 No 39 32.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 99229427 - NR_135746 NIPAL2 1 1 0.29 17 7.42 77.94 28 5.57 Yes -1 0.48 No 27 0.88 Yes -27 0.93 Yes 43 90.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 99229491 - NR_135746 NIPAL2 1 3.06 0.96 41 8.63 83.81 27 5.39 No 49 1.21 Yes 26 0.5 Yes -24 0.44 No 46 69.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 99229515 - NR_135746 NIPAL2 1 4.75 1.38 51 6.75 82.44 38 7.98 Yes 25 1.2 Yes 37 0.71 Yes -37 0.8 Yes 33 95.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 99260028 - NR_135746 NIPAL2 1 0.26 0.14 9 7.45 91.87 17 7.26 Yes 4 1.77 Yes 0 0 No -28 0.44 No 42 38.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 99301913 - NR_135746 NIPAL2 1 4.58 0.57 31 9.03 91.37 20 8.35 Yes 7 1.11 Yes 0 0 No -33 0.61 No 37 59.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 24748086 + NM_001322854 NIPAL3 1 0.79 0.14 7 5.97 94.04 20 3.77 No 17 1.23 Yes 0 0 No -23 0.95 Yes 47 92.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24748303 + NM_001322854 NIPAL3 1 3.25 0.6 32 7.2 77.19 23 5.74 Yes 10 0.62 No 22 0.79 Yes -29 0.64 No 42 67.06 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 24759593 + NM_001322854 NIPAL3 1 1.39 0.24 13 10.54 90.71 35 6.96 Yes 57 0.97 Yes 28 0.46 Yes -30 0.7 Yes 50 68.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 24766579 + NM_001322854 NIPAL3 1 4.46 0.83 37 5.53 80.58 32 7.46 Yes 19 1.48 Yes 0 0 No -31 0.87 Yes 39 93.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24770524 + NM_001322854 NIPAL3 1 0.63 0.18 9 5.72 85.05 26 6.55 Yes 13 1.16 Yes 0 0 No -25 0.58 No 45 78.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 24771678 + NM_001322854 NIPAL3 1 0.51 0.15 8 1.18 0 47 6.92 Yes 34 1.61 Yes 0 0 No -35 0.78 Yes 35 89.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24773318 + NM_001322854 NIPAL3 1 0.75 0.18 10 9.7 87.76 38 6.77 Yes 67 -1.67 No 0 0 No -21 0.52 No 46 46.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 24776884 + NM_001322854 NIPAL3 1 1.39 0.25 13 7.18 91.42 28 4.36 No 71 0.97 Yes 0 0 No -28 0.38 No 42 46.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 24792493 + NM_001322854 NIPAL3 1 20.43 4.51 72 9.5 83.14 32 5.33 No 57 0.87 Yes 31 0.56 Yes -28 0.8 Yes 42 71.8 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 36885306 + NM_133433 NIPBL 1 0.68 0.58 29 7.3 80.8 33 6.24 Yes 20 1.4 Yes 0 0 No -32 0.85 Yes 38 86.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 36942258 + NM_133433 NIPBL 1 0.45 0.4 26 8.99 92.53 31 6.34 Yes 18 0.97 Yes 0 0 No -30 0.71 Yes 40 78.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 36958266 + NM_133433 NIPBL 1 0.16 0.17 11 4.14 0 21 4.47 No 71 0.71 No 0 0 No -20 0.82 Yes 50 92.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 36960012 + NM_133433 NIPBL 1 0.16 0.13 9 8.28 83.21 27 5.91 Yes 14 0.37 No 0 0 No -26 0.65 No 44 73.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 36971850 + NM_133433 NIPBL 1 0.27 0.25 13 5.66 72.94 33 6.56 Yes 20 0.76 No 0 0 No -32 0.46 No 38 57.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 36982266 + NM_133433 NIPBL 1 0.12 0.1 7 9.15 86.33 26 5.91 Yes 13 0.79 Yes 0 0 No -25 0.56 No 42 39.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 36992661 + NM_133433 NIPBL 1 0.22 0.35 19 5.53 90.62 28 5.25 No 2 1.03 Yes 0 0 No -27 0.36 No 43 48.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 37012277 + NM_133433 NIPBL 1 0.23 0.36 21 3.91 0 50 9.66 Yes 52 1.42 Yes 0 0 No -49 0.45 No 21 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 37040711 + NM_133433 NIPBL 1 0.16 0.17 10 7.98 88.96 30 5.8 Yes 67 1.25 Yes 0 0 No -25 0.84 Yes 45 82.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37044741 + NM_133433 NIPBL 1 0.2 0.19 13 -0.18 0 37 6.19 Yes 13 1.03 Yes 0 0 No -25 0.45 No 34 51.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 37048228 + NM_133433 NIPBL 1 0.95 0.86 39 9.95 85.59 25 6.46 Yes 42 0.44 No 0 0 No -24 0.62 No 46 42.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 37061988 + NM_133433 NIPBL 1 0.18 0.17 10 5.41 90.92 28 4.25 No 35 1.32 Yes 0 0 No -27 0.52 No 43 49.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 37062304 + NM_133433 NIPBL 1 0.3 0.24 14 8.12 79.31 25 5.91 Yes 39 -2.04 No 0 0 No -24 0.68 Yes 46 68.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29960361 - NM_003634 NIPSNAP1 1 0.13 0.19 11 9.42 91.07 44 7.67 Yes 17 1.37 Yes 29 0.76 Yes -30 0.7 Yes 40 74.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 29976145 - NM_003634 NIPSNAP1 1 1.31 1.15 50 8.38 85.7 37 4.55 No 13 1.15 Yes 20 0.74 Yes -20 0.78 Yes 50 87.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52508154 + NM_007184 NISCH 1 1.14 0.88 41 2.56 0 41 8.23 Yes 28 0.03 No 0 0 No -40 0.91 Yes 30 92.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52510558 + NM_007184 NISCH 1 0.45 0.35 19 5.63 85.41 25 6.39 Yes 12 1.48 Yes 0 0 No -24 0.88 Yes 46 91.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52512170 + NM_007184 NISCH 1 1.05 0.94 41 3.4 78.2 22 4.59 No 36 0.27 No 0 0 No -22 0.92 Yes 48 79.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52512388 + NM_007184 NISCH 1 5.61 3.74 69 2.5 78.4 21 5.14 No 61 0.28 No 0 0 No -20 0.78 Yes 50 78.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52512390 + NM_007184 NISCH 1 0.48 0.32 14 -8.72 67.52 23 5.33 No 63 0.28 No 0 0 No -22 0.79 Yes 48 66.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52514862 + NM_007184 NISCH 1 0.38 0.11 8 6.39 66.48 23 5.9 Yes NA NA NA 25 0.91 Yes -31 0.56 No 48 76.28 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 52514894 + NM_007184 NISCH 1 38.44 12.29 72 4.63 78.39 26 5.21 No 22 -0.61 No 25 0.91 Yes -25 0.77 Yes 45 67.97 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 52519797 + NM_007184 NISCH 1 0.38 0.24 13 2.15 0 27 6.71 Yes 14 2.14 Yes 22 0.97 Yes -26 0.94 Yes 44 93.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52524047 + NM_007184 NISCH 1 0.32 0.11 7 7.29 82.63 15 6 Yes 50 0.25 No 22 0.98 Yes -30 0.5 No 51 48.06 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 52524144 + NM_007184 NISCH 1 0.7 0.22 13 6.43 81.22 28 5.97 Yes 64 1.09 Yes 0 0 No -27 0.86 Yes 43 85.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52525892 + NM_007184 NISCH 1 1.02 0.58 26 -3.62 0 32 3.95 No NA NA NA 0 0 No -29 0.93 Yes 41 84.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 161089282 + NM_001185094 NIT1 1 0.27 0.15 9 -16 0 13 3.95 No 25 -3.03 No 23 0.86 Yes -16 0.71 Yes 54 37.01 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 161089614 + NM_001185094 NIT1 1 0.16 0.14 8 -3.52 0 14 3.87 No 17 1.58 Yes 23 0.9 Yes -29 0.88 Yes 41 92.71 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 100067835 + NM_020202 NIT2 1 0.06 0.17 10 5.41 83.19 25 6.4 Yes 12 1.26 Yes 0 0 No -24 0.84 Yes 46 85.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 100068141 + NM_020202 NIT2 1 0.08 0.21 10 6.66 86.87 19 7.87 Yes 6 1.44 Yes 0 0 No -18 0.55 No 52 84.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 100070089 + NM_020202 NIT2 1 0.1 0.25 12 7.93 87.72 14 5.42 No 1 1.29 Yes 0 0 No -24 0.57 No 46 61.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 119070392 - NM_024528 NKAP 1 0.62 0.6 33 0.71 78.97 28 6.18 Yes 69 0.7 No 0 0 No -27 0.51 No 43 56.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 119071813 - NM_024528 NKAP 1 0.14 0.11 7 8.5 90.99 32 3.85 No 4 0.85 Yes 0 0 No -27 0.33 No 46 34.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 119377055 - NR_027131 NKAPP1 1 10.86 0.38 22 6.9 76.25 18 5.51 No 52 -2.73 No 0 0 No -17 0.42 No 44 44.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 23950586 - NM_020345 NKIRAS1 1 0.3 0.11 8 7.64 95.65 18 5.41 No 5 0.56 No 0 0 No -27 0.8 Yes 46 76.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 23952938 - NM_020345 NKIRAS1 1 2.45 0.42 25 2.14 0 43 7.67 Yes 30 1 Yes 28 0.54 Yes -42 0.81 Yes 28 61.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 23955661 - NM_020345 NKIRAS1 1 1.08 0.17 10 10.2 86.44 26 5.8 Yes 13 0.72 No 0 0 No -25 0.93 Yes 45 95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 23956146 - NM_020345 NKIRAS1 1 1.15 0.14 10 9.75 80.96 22 5.39 No 9 0.43 No 0 0 No -21 0.69 Yes 49 77.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 23956547 - NM_020345 NKIRAS1 1 1.41 0.25 15 1.7 75.21 14 3.68 No 67 0.28 No 0 0 No -19 0.37 No 51 43.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40174393 + NM_001144927 NKIRAS2 1 0.66 0.81 36 8.78 87.37 29 6.98 Yes 16 1.71 Yes 28 0.96 Yes -28 0.94 Yes 42 96.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 42660124 + NM_005385 NKTR 1 0.15 0.13 8 9.54 87.82 23 7.35 Yes 10 1.38 Yes 0 0 No -22 0.92 Yes 48 94.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 42661507 + NM_005385 NKTR 1 9.15 4.9 72 6.58 87.64 30 8.63 Yes 17 0.53 No 29 0.81 Yes -29 0.61 No 41 53.63 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 42674167 + NM_005385 NKTR 1 0.75 0.6 31 7.52 87.55 46 6.68 Yes 33 0.24 No 0 0 No -21 0.42 No 40 42.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 42675052 + NM_005385 NKTR 1 1.76 1.21 54 4.46 75.69 50 6.47 Yes 37 0.89 Yes 24 0.94 Yes -31 0.35 No 39 21.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 42675104 + NM_005385 NKTR 1 0.18 0.11 7 -2.75 53.37 17 3.8 No 38 0.92 Yes 21 0.55 Yes -57 0.67 Yes 13 74.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 42675109 + NM_005385 NKTR 1 1.62 1.1 48 -6.48 0 22 4.5 No 43 0.92 Yes 21 0.55 Yes -62 0.22 No 15 17.75 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 42675119 + NM_005385 NKTR 1 0.52 0.36 18 -3.94 0 13 4.36 No 53 0.92 Yes 21 0.55 Yes -25 0.25 No 45 11.6 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 42676108 + NM_005385 NKTR 1 2.77 3.03 66 -0.1 0 32 6.44 Yes 69 0.68 No 0 0 No -31 0.44 No 32 66.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 42684839 + NM_005385 NKTR 1 0.38 0.32 17 -8.4 0 17 4.24 No 28 -2.85 No 0 0 No -16 0.4 No 45 51.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 42685182 + NM_005385 NKTR 1 0.41 0.14 10 7.69 88.42 33 6.94 Yes 12 0.95 Yes 0 0 No -32 0.64 No 38 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 42685390 + NM_005385 NKTR 1 67.74 24.6 72 2.76 73.75 24 5.48 No 24 0.05 No 26 0.85 Yes -23 0.85 Yes 47 83.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 33462079 - NM_018096 NLE1 1 5.4 2.93 65 8.87 87.15 32 5.92 Yes 72 1.31 Yes 31 0.87 Yes -29 0.87 Yes 41 89.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 33462351 - NM_018096 NLE1 1 0.28 0.15 11 5.8 83.71 17 4.77 No 66 0.71 No 0 0 No -22 0.52 No 48 37.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33463230 - NM_018096 NLE1 1 0.48 0.36 22 -1.74 0 40 8.64 Yes 27 1.28 Yes 0 0 No -55 0.82 Yes 15 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26373653 + NM_016231 NLK 1 0.48 0.19 10 8.53 91.63 27 6 Yes 14 0.55 No 0 0 No -26 0.37 No 44 71.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 26374942 + NM_016231 NLK 1 15.56 6.43 72 10.29 90.14 33 4.71 No 2 1.37 Yes 32 0.68 Yes -32 0.73 Yes 38 83.26 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 26425119 + NM_016231 NLK 1 0.9 0.38 23 10.24 87.44 27 4.39 No 45 0.93 Yes 0 0 No -26 0.64 No 47 76.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 26504951 + NM_016231 NLK 1 0.24 0.18 10 2.9 68.57 23 7.48 Yes 10 1.4 Yes 0 0 No -22 0.51 No 42 55.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 65036721 + NM_020726 NLN 1 6.66 2.49 63 2.76 83.92 29 8.88 Yes 16 1.13 Yes 0 0 No -28 0.55 No 42 69.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 65093419 + NM_020726 NLN 1 0.46 0.35 18 9.21 94.53 34 5.12 No 12 0.76 No 0 0 No -34 0.67 Yes 36 54.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 3590273 - NR_075083 NLRC3 1 0.39 0.14 9 3.44 77.41 29 6.22 Yes 41 0.45 No 0 0 No -28 0.66 No 42 70.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 3614787 - NR_075083 NLRC3 1 3.67 0.4 26 8.81 88.03 26 7.75 Yes 13 1.24 Yes 25 0.95 Yes -25 0.9 Yes 45 92.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57024535 + NM_001330552 NLRC5 1 4.15 0.5 26 8.98 84.41 20 5.03 No 7 0.69 No 26 0.7 Yes -19 0.62 No 51 66.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57025826 + NM_001330552 NLRC5 1 3.56 0.6 29 5.22 74.28 23 7.15 Yes 10 1.62 Yes 22 0.92 Yes -22 0.85 Yes 48 89.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57055315 + NM_001330552 NLRC5 1 0.29 0.25 14 5.03 77.58 27 5.29 No 21 -1.03 No 0 0 No -26 0.74 Yes 44 66.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 57062221 + NM_001330552 NLRC5 1 0.47 0.21 9 -1.82 0 18 4.12 No 73 0.7 No 0 0 No -34 0.51 No 40 69.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 57068423 + NM_001330552 NLRC5 1 0.41 0.24 15 8.86 81.53 33 5.52 No 38 1.24 Yes 27 0.84 Yes -27 0.49 No 43 62.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 57078407 + NM_001330552 NLRC5 1 0.13 0.11 7 9.7 79.71 34 5.92 Yes 44 -0.92 No 0 0 No -33 0.8 Yes 37 89.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57081654 + NM_001330552 NLRC5 1 0.53 0.57 34 7.62 88.07 27 5.74 Yes 49 0.92 Yes 26 0.69 Yes -26 0.56 No 44 77.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 57093284 + NM_001330552 NLRC5 1 0.71 0.25 17 7.19 77.97 35 6.4 Yes 22 1.02 Yes 28 0.58 Yes -34 0.87 Yes 36 65.51 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 57093320 + NM_001330552 NLRC5 1 2.03 0.81 37 7.88 70.73 40 5 No 58 1.01 Yes 28 0.58 Yes -28 0.68 Yes 32 86.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57095509 + NM_001330552 NLRC5 1 0.42 0.19 12 -7.67 0 14 4.24 No 51 -2.43 No 22 0.88 Yes -13 0.42 No 59 15.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 57095771 + NM_001330552 NLRC5 1 26.34 7.03 71 7.65 83.87 26 5.65 Yes 13 1 Yes 25 0.88 Yes -25 0.74 Yes 45 73.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57095773 + NM_001330552 NLRC5 1 11.21 3 63 -0.7 72.69 28 5.83 Yes 15 1.01 Yes 25 0.88 Yes -27 0.64 No 43 70.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 57096070 + NM_001330552 NLRC5 1 1.3 0.38 22 8.32 93.1 53 7 Yes 40 1.42 Yes 31 0.74 Yes -29 0.6 No 41 57.85 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 57096262 + NM_001330552 NLRC5 1 4.19 1.24 47 9.43 84.53 28 5.93 Yes 15 1.07 Yes 27 0.9 Yes -27 0.81 Yes 43 90.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 57103217 + NM_001330552 NLRC5 1 0.22 0.15 8 -6.32 60.53 42 7.61 Yes 29 1.87 Yes 0 0 No -41 0.68 Yes 29 77.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57109846 + NM_001330552 NLRC5 1 1.31 0.63 32 0.49 83.57 42 4.56 No 29 0.79 Yes 21 0.64 Yes -27 0.69 Yes 43 66.75 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 57109852 + NM_001330552 NLRC5 1 1.62 0.72 33 -1.75 0 9 3.87 No 35 0.79 Yes 21 0.64 Yes -37 0.7 Yes 33 66.31 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 57109870 + NM_001330552 NLRC5 1 0.26 0.13 7 2.86 84 15 4.61 No 2 1.5 Yes 0 0 No -55 0.67 Yes 19 79.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57113656 + NM_001330552 NLRC5 1 0.3 0.15 10 8.06 82.31 16 5.66 Yes NA NA NA 0 0 No -25 0.6 No 45 84.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 57115435 + NM_001330552 NLRC5 1 0.59 0.35 20 -4.74 67.63 43 6.55 Yes 1 1.58 Yes 27 0.23 Yes -42 0.96 Yes 28 97.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 5418365 - NM_033007 NLRP1 1 9.33 1.78 53 6.3 74.14 20 6.16 Yes 73 -0.94 No 0 0 No -31 0.59 No 40 74.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 5418575 - NM_033007 NLRP1 1 1.01 0.19 11 4.2 77.65 24 5.27 No 16 -1.73 No 0 0 No -23 0.91 Yes 47 92.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5424333 - NM_033007 NLRP1 1 323.49 24.19 72 8.08 84.68 25 6.35 Yes 12 0.91 Yes 24 0.85 Yes -24 0.66 Yes 46 79.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 5430134 - NM_033007 NLRP1 1 0.64 0.11 8 10.43 88.39 34 5.74 Yes 0 1.71 Yes 0 0 No -25 0.56 No 34 50.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5433379 - NM_033007 NLRP1 1 1.71 0.24 12 4.74 89.15 14 4.66 No 1 0.21 No 21 0.54 Yes -21 0.48 No 46 46.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 5443011 - NM_033007 NLRP1 1 0.84 0.15 10 5.8 77.27 36 6.08 Yes 48 -1.89 No 0 0 No -32 0.63 No 47 64.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 5456819 - NM_033007 NLRP1 1 0.55 0.18 12 9.09 80.45 30 5.48 No 42 -1.92 No 0 0 No -29 0.81 Yes 41 80.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5458501 - NM_033007 NLRP1 1 0.92 0.35 18 6.74 91.4 21 4.57 No 0 0.45 No 0 0 No -27 0.64 No 43 73.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 5486142 - NM_033007 NLRP1 1 0.67 0.25 13 10.18 86.91 13 5.24 No 47 2.06 Yes 0 0 No -49 0.42 No 11 51.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 119044190 + NM_001282144 NLRX1 1 0.82 0.4 20 -0.04 69.99 31 7.21 Yes 18 2.19 Yes 0 0 No -30 0.9 Yes 40 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 119046306 + NM_001282144 NLRX1 1 0.92 0.29 18 11.34 86.45 34 9.54 Yes 21 0.68 No 0 0 No -33 0.84 Yes 37 80.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 119048418 + NM_001282144 NLRX1 1 0.32 0.11 8 3.78 82.11 19 4.59 No 6 0.03 No 0 0 No -18 0.77 Yes 52 93.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 119053702 + NM_001282144 NLRX1 1 1.03 0.14 9 7.23 79.87 19 5.39 No 43 -1.65 No 0 0 No -25 0.67 Yes 45 77.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 160952945 + NM_001320227 NMD3 1 0.11 0.25 15 5.18 69.11 27 6.65 Yes 37 0.35 No 0 0 No -29 0.45 No 41 70.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 160958820 + NM_001320227 NMD3 1 0.06 0.18 11 3.48 64.51 31 4.73 No 39 0.56 No 21 0.85 Yes -26 0.88 Yes 44 92.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 160960301 + NM_001320227 NMD3 1 0.04 0.13 9 1.47 0 15 3.87 No 23 0.85 Yes 0 0 No -35 0.69 Yes 35 68.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 49238458 + NM_001018136 NME1-NME2 1 0.1 1.54 56 4.89 73.12 43 6.24 Yes 55 0.23 No 37 0.78 Yes -37 0.81 Yes 33 90.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 1820986 - NM_002513 NME3 1 0.58 0.28 15 -2.7 0 17 4.21 No 22 0.53 No 0 0 No -34 0.88 Yes 36 85.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 1821193 - NM_002513 NME3 1 0.28 0.18 12 2.4 67.45 22 5.29 No 62 -3.87 No 27 0.6 Yes -21 0.2 No 43 23.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 449294 + NM_001286440 NME4 1 0.07 0.15 10 4.16 75.4 21 7.27 Yes -3 -1.17 No 0 0 No -23 0.88 Yes 50 39.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 450108 + NM_001286440 NME4 1 0.99 2.28 57 7.64 85.17 20 6.15 Yes 7 0.58 No 25 0.89 Yes -25 0.81 Yes 45 80.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48337727 - NM_001308427 NME6 1 9.58 4.47 70 8.72 91.71 22 6.98 Yes 9 0.98 Yes 21 0.8 Yes -21 0.8 Yes 49 61.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 169216299 - NR_104229 NME7 1 0.32 0.1 7 8.42 87.84 20 5.1 No 7 1.45 Yes 19 0.8 Yes -19 0.62 No 51 81.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 169271292 - NR_104229 NME7 1 1.68 0.51 22 7.18 76.84 37 7.94 Yes 24 1.04 Yes 24 0.66 Yes -24 0.5 No 46 54.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 169271657 - NR_104229 NME7 1 1.23 0.42 24 8.92 93.28 23 6.04 Yes 63 0.85 Yes 0 0 No -22 0.66 No 48 59.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169293708 - NR_104229 NME7 1 15.04 4.58 55 6.47 91.62 22 5.1 No 43 0.56 No 21 0.6 Yes -21 0.75 Yes 49 66.86 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 169326901 - NR_104229 NME7 1 1.91 0.56 27 8.41 83.7 19 5.5 No 6 0.49 No 0 0 No -24 0.74 Yes 42 69.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 152127380 - NM_004688 NMI 1 0.12 0.4 18 3.6 0 13 4.36 No 46 0.23 No 0 0 No -29 0.78 Yes 41 61.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 152127388 - NM_004688 NMI 1 0.12 0.33 17 -6.63 0 22 5.95 Yes 38 0.24 No 0 0 No -37 0.7 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 152129388 - NM_004688 NMI 1 0.08 0.26 14 8.89 86.57 44 7.79 Yes 31 1.96 Yes 0 0 No -43 0.69 Yes 27 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 152145589 - NM_004688 NMI 1 0.15 0.19 11 4.02 80.12 26 7.55 Yes 13 1.36 Yes 0 0 No -25 0.93 Yes 45 94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 152145592 - NM_004688 NMI 1 0.88 1.28 47 7.28 85.02 23 7.35 Yes 10 1.39 Yes 22 0.92 Yes -22 0.93 Yes 48 93.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 10041313 + NM_022787 NMNAT1 1 20.14 6.58 71 10.79 88.27 32 6.16 Yes 19 0.88 Yes 31 0.82 Yes -31 0.57 No 39 71.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 10044004 + NM_022787 NMNAT1 1 2.45 0.86 36 6.51 83.27 43 5.53 No 12 0.69 No 0 0 No -24 0.96 Yes 46 91.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 10045193 + NM_022787 NMNAT1 1 4.01 1.38 47 6.29 84.78 25 6.74 Yes 12 1.72 Yes 0 0 No -24 0.9 Yes 46 93.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4512473 - NM_001305141 NMRAL1 1 0.16 0.18 11 1.69 0 33 6.08 Yes 49 0.68 No 0 0 No -32 0.67 Yes 38 80.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4513514 - NM_001305141 NMRAL1 1 0.84 0.82 38 9.15 93.97 39 5.84 Yes 31 0.76 No 24 0.85 Yes -30 0.79 Yes 40 86.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4514515 - NM_001305141 NMRAL1 1 0.16 0.18 10 9.57 79.41 32 5.57 Yes 24 -0.7 No 0 0 No -18 0.77 Yes 52 84.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4516687 - NM_001305141 NMRAL1 1 0.19 0.15 10 9.08 80.1 33 5.83 Yes 48 0.14 No 29 0.31 Yes -20 0.81 Yes 50 75.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4519700 - NM_001305141 NMRAL1 1 2.14 1.88 53 5.78 80.64 21 5.62 Yes 8 1.06 Yes 20 0.71 Yes -20 0.69 Yes 50 88.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4521451 - NM_001305141 NMRAL1 1 2.97 2.58 63 8.45 87.82 22 5.74 Yes 9 1.14 Yes 21 0.76 Yes -21 0.87 Yes 49 93.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 4522416 - NM_001305141 NMRAL1 1 0.31 0.26 16 6.77 90.92 28 5.13 No 62 -2.23 No 0 0 No -27 0.61 No 43 74.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 77682586 - NM_001330679 NMRK1 1 0.58 0.13 8 2.95 69.8 57 7.77 Yes 11 -1.51 No 0 0 No -39 0.51 No 13 60.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 77684039 - NM_001330679 NMRK1 1 1.54 0.43 18 3.72 64.78 49 8.41 Yes 36 2.11 Yes 29 0.53 Yes -29 0.56 No 29 59.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 77702785 - NM_001330679 NMRK1 1 4.52 0.79 37 7.04 80.87 34 6.16 Yes 21 0.33 No 33 0.31 Yes -33 0.74 Yes 37 59.84 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 43159233 + NM_021079 NMT1 1 0.25 0.89 41 3.71 72.31 27 7.07 Yes 14 1.51 Yes 0 0 No -26 0.94 Yes 44 92.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 43161025 + NM_021079 NMT1 1 0.05 0.18 10 5.27 86.68 24 4.65 No 61 0.6 No 23 0.57 Yes -23 0.85 Yes 47 88.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 43174481 + NM_021079 NMT1 1 0.09 0.26 15 -4.11 68.25 20 4.79 No NA NA NA 21 0.73 Yes -20 0.64 No 50 28.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 43175751 + NM_021079 NMT1 1 0.2 0.46 23 -6.7 73.94 37 6.96 Yes 51 0.71 No 0 0 No -25 0.76 Yes 45 50.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 43181488 + NM_021079 NMT1 1 0.13 0.35 20 5.96 94.23 17 4.73 No 17 1.27 Yes 0 0 No -25 0.66 No 45 75.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 15175165 - NM_001308295 NMT2 1 0.6 0.14 9 -1.4 0 21 4.52 No 27 0.81 Yes 25 0.67 Yes -14 0.37 No 18 48.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 43609617 + NM_012343 NNT 1 0.16 0.29 14 5.42 74.69 32 6.05 Yes 43 0.63 No 0 0 No -31 0.52 No 45 57.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 43614601 + NM_012343 NNT 1 2.19 3.21 64 7.45 72.62 44 5.33 No 12 1.72 Yes 0 0 No -24 0.86 Yes 46 89.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 43618395 + NM_012343 NNT 1 0.24 0.31 16 10.46 82.95 33 5.74 Yes 20 0.82 Yes 0 0 No -32 0.6 No 46 49.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 43628303 + NM_012343 NNT 1 0.11 0.15 11 -5.05 67.27 34 7.08 Yes 45 1.02 Yes 0 0 No -33 0.71 Yes 37 79.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 43631198 + NM_012343 NNT 1 0.18 0.29 17 7.1 85.7 35 6.59 Yes 58 -2.57 No 0 0 No -35 0.49 No 35 64.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 43644728 + NM_012343 NNT 1 0.11 0.24 11 1.74 74.26 23 4.96 No 69 0.54 No 0 0 No -22 0.67 Yes 48 79.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 43646585 + NM_012343 NNT 1 0.2 0.32 19 9.29 88.27 29 6.32 Yes 16 1.36 Yes 0 0 No -28 0.91 Yes 42 95.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 43648025 + NM_012343 NNT 1 3.1 5.14 70 11.46 93.78 18 3.98 No 41 0.6 No 32 0.8 Yes -32 0.69 Yes 41 69.59 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 43648495 + NM_012343 NNT 1 0.2 0.29 14 11.13 92.36 31 5.27 No 61 1.4 Yes 0 0 No -30 0.43 No 40 53.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 43702773 + NM_012343 NNT 1 0.07 0.11 8 2.95 79.19 22 5.04 No 33 1.08 Yes 0 0 No -21 0.77 Yes 49 80.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 43576096 - NR_073113 NNT-AS1 1 1.31 0.36 20 6.82 76.07 105 8.34 Yes 76 0.96 Yes 0 0 No -37 0.77 Yes 33 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 43576096 - NR_073113 NNT-AS1 1 0.56 0.17 8 6.82 76.07 105 8.34 Yes 76 0.96 Yes 0 0 No -37 0.77 Yes 33 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 43578682 - NR_073113 NNT-AS1 1 3.53 1 40 7.69 76.03 35 6.16 Yes 22 0.95 Yes 21 0.43 Yes -34 0.86 Yes 36 87.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 43578722 - NR_073113 NNT-AS1 1 0.67 0.18 11 7.9 76.03 35 6.16 Yes 59 -0.62 No 21 0.43 Yes -21 0.7 Yes 36 71.01 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 43579303 - NR_073113 NNT-AS1 1 6.07 1.71 57 1.14 66.7 53 7.94 Yes 47 1.11 Yes 35 0.04 Yes -52 0.93 Yes 18 96.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 57830067 - NM_032313 NOA1 1 0.08 0.1 7 4.24 75.37 53 6.76 Yes 40 0.27 No 0 0 No -24 0.58 No 46 42.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 57832894 - NM_032313 NOA1 1 0.46 0.69 33 -7.32 0 12 3.39 No 15 0.84 Yes 0 0 No -32 0.5 No 43 56.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 57832973 - NM_032313 NOA1 1 0.14 0.22 16 8.05 85.23 37 6.97 Yes 24 1.46 Yes 0 0 No -36 0.94 Yes 34 92.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 57839516 - NM_032313 NOA1 1 0.56 0.6 29 -4.83 0 30 5.22 No 3 0.87 Yes 0 0 No -29 0.69 Yes 41 77.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 57840213 - NM_032313 NOA1 1 0.12 0.13 7 3.96 77.54 42 5.81 Yes 71 0.88 Yes 27 0.55 Yes -41 0.65 No 39 79.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 69783014 - NR_074074 NOB1 1 0.04 0.14 8 -1.34 0 18 4.12 No 64 1.59 Yes 0 0 No -29 0.81 Yes 41 67.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 880200 - NM_015658 NOC2L 1 0.6 0.83 35 -2.36 63.6 21 4.69 No 32 1.13 Yes 25 0.9 Yes -20 0.68 Yes 50 84.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 881663 - NM_015658 NOC2L 1 0.07 0.17 10 -4.64 0 30 5.59 Yes 11 1.46 Yes 0 0 No -29 0.52 No 47 46.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 881878 - NM_015658 NOC2L 1 0.38 0.83 35 3.99 79.97 15 5.39 No 53 2.19 Yes 0 0 No -24 0.78 Yes 46 36.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 882245 - NM_015658 NOC2L 1 0.13 0.31 12 0.94 72.69 32 5.74 Yes 32 0.48 No 0 0 No -26 0.38 No 21 40.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 883972 - NM_015658 NOC2L 1 0.29 0.85 35 1.23 0 15 3.5 No 55 -4.03 No 0 0 No -30 0.8 Yes 40 73.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 883975 - NM_015658 NOC2L 1 0.95 2.76 66 -4.8 0 12 3.3 No 52 -3.84 No 0 0 No -27 0.83 Yes 43 80.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 887916 - NM_015658 NOC2L 1 0.06 0.18 11 5.43 79.47 30 6.4 Yes 71 1.85 Yes 0 0 No -29 0.95 Yes 41 94.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 889904 - NM_015658 NOC2L 1 4.92 9.79 71 9.26 92.42 21 6.93 Yes 8 1.38 Yes 20 0.68 Yes -20 0.81 Yes 50 82.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 890858 - NM_015658 NOC2L 1 0.06 0.17 10 6.18 79 23 4.64 No 2 0.98 Yes 0 0 No -22 0.85 Yes 48 84.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 891363 - NM_015658 NOC2L 1 0.15 0.26 14 4.03 79.92 27 6.09 Yes 2 -0.42 No 0 0 No -26 0.72 Yes 44 58.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 892424 - NM_015658 NOC2L 1 0.06 0.14 8 7.73 82.04 40 5.93 Yes 40 -1.47 No 20 0.86 Yes -24 0.31 No 50 30.32 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 894517 - NM_015658 NOC2L 1 0.07 0.13 8 7.61 84.87 26 5.24 No 63 -0.67 No 0 0 No -30 0.61 No 44 64.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 96104232 - NM_022451 NOC3L 1 0.07 0.13 9 6.83 76.99 27 6.4 Yes 57 1 Yes 0 0 No -26 0.72 Yes 44 73.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96109134 - NM_022451 NOC3L 1 0.09 0.14 9 -12.08 0 19 5.41 No 6 0.87 Yes 0 0 No -24 0.87 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 96110061 - NM_022451 NOC3L 1 0.04 0.1 7 -7.93 0 13 3.96 No 57 -3.06 No 22 0.89 Yes -19 0.33 No 51 32.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 96113752 - NM_022451 NOC3L 1 0.33 0.46 23 4.5 82.86 12 4.67 No -1 0.35 No 0 0 No -20 0.28 No 45 36.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 96114849 - NM_022451 NOC3L 1 0.11 0.22 13 -2.33 74.22 26 4.15 No 1 1.26 Yes 0 0 No -26 0.59 No 45 51.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 96117322 - NM_022451 NOC3L 1 0.48 0.74 29 5.43 81.55 26 6.54 Yes 13 1.54 Yes 0 0 No -26 0.85 Yes 44 84.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96121199 - NM_022451 NOC3L 1 2.89 5.44 71 3.97 79.63 21 4.36 No 4 0.48 No 0 0 No -20 0.96 Yes 50 97.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 96121625 - NM_022451 NOC3L 1 0.11 0.19 13 -3.91 0 15 6 Yes 63 0.88 Yes 0 0 No -29 0.87 Yes 41 83.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132632234 + NM_024078 NOC4L 1 0.34 0.28 19 4.24 82.24 21 5 No 63 1.4 Yes 0 0 No -23 0.46 No 52 66.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 132633161 + NM_024078 NOC4L 1 0.16 0.18 11 -7.88 0 12 4.12 No NA NA NA 0 0 No -27 0.48 No 43 41.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 132633339 + NM_024078 NOC4L 1 0.38 0.36 19 0.95 0 14 4.47 No 25 1.94 Yes 0 0 No -37 0.86 Yes 33 53.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 132633388 + NM_024078 NOC4L 1 0.3 0.33 18 5.99 79.46 28 6.32 Yes 74 1.9 Yes 0 0 No -27 0.73 Yes 43 86.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 139938426 + NM_012118 NOCT 1 0.99 0.15 10 8.82 93.31 28 5.29 No 37 1.06 Yes 0 0 No -27 0.49 No 21 56.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 139952055 + NM_012118 NOCT 1 1.04 0.15 8 10.95 79.9 36 5.91 Yes 23 1.22 Yes 0 0 No -28 0.87 Yes 42 91.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 30468226 - NM_006092 NOD1 1 1 0.1 7 8.11 70.91 29 5.48 No 16 0.74 No 28 0.93 Yes -28 0.9 Yes 42 94.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 30477780 - NM_006092 NOD1 1 0.84 0.1 7 8.04 90.34 21 6.4 Yes 8 1.57 Yes 0 0 No -20 0.83 Yes 50 85.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 30478005 - NM_006092 NOD1 1 0.9 0.11 8 6.92 78.22 19 6.31 Yes 6 1.15 Yes 0 0 No -18 0.63 No 52 53.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 30486765 - NM_006092 NOD1 1 12.76 1.31 52 6.64 83.55 36 7 Yes 23 1.19 Yes 35 0.6 Yes -35 0.73 Yes 35 85.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 30486908 - NM_006092 NOD1 1 3.88 0.36 22 8.32 86.66 19 3.71 No 31 1.08 Yes 0 0 No -21 0.5 No 49 64.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 30490690 - NM_006092 NOD1 1 5.71 0.65 31 8.41 96.46 22 5.29 No 57 -2.91 No 0 0 No -21 0.43 No 49 52.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 30490693 - NM_006092 NOD1 1 3.42 0.4 22 4.69 82.68 19 5 No 54 -2.9 No 0 0 No -25 0.53 No 52 33.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 30497544 - NM_006092 NOD1 1 0.62 0.11 7 10.65 88.66 105 9.83 Yes 25 0.03 No 0 0 No -30 0.62 No 40 85.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 50746663 + NM_022162 NOD2 1 1.36 0.15 7 7.08 89.8 26 6.56 Yes 64 -5.23 No 0 0 No -25 0.91 Yes 45 96.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 50748918 + NM_022162 NOD2 1 8.17 1.04 40 10.68 84.41 43 6.4 Yes 30 1.43 Yes 0 0 No -30 0.48 No 28 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 10748410 - NM_024894 NOL10 1 0.17 0.17 11 3.16 78.67 15 3.75 No 24 0.75 No 0 0 No -25 0.72 Yes 45 70.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 10759202 - NM_024894 NOL10 1 0.15 0.15 7 9.43 74.4 32 6.39 Yes -2 0.93 Yes 0 0 No -31 0.74 Yes 39 77.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 10761286 - NM_024894 NOL10 1 0.43 0.47 27 11.36 98.45 25 4.82 No 12 0.38 No 0 0 No -28 0.57 No 42 49.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 10762277 - NM_024894 NOL10 1 1.47 1.64 54 7.79 86.2 26 6.39 Yes 13 1.71 Yes 25 0.86 Yes -25 0.94 Yes 45 92.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 10773264 - NM_024894 NOL10 1 0.15 0.18 11 6.62 86.19 19 4.88 No 76 -1.53 No 0 0 No -29 0.52 No 41 40.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 10774685 - NM_024894 NOL10 1 0.94 1 45 6.92 90.15 23 5.76 Yes 10 1.62 Yes 0 0 No -25 0.84 Yes 45 80.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 10803166 - NM_024894 NOL10 1 0.7 0.76 34 -1.4 0 28 6.22 Yes 50 0 No 0 0 No -28 0.81 Yes 42 76.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 10813113 - NM_024894 NOL10 1 0.41 0.33 17 2.54 0 23 5.7 Yes 53 0.5 No 0 0 No -29 0.65 No 41 85.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 10813460 - NM_024894 NOL10 1 0.12 0.14 9 2.56 74.32 31 6.32 Yes 18 1.61 Yes 0 0 No -30 0.71 Yes 40 72.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 10824725 - NM_024894 NOL10 1 0.42 0.25 14 4.43 80.37 17 4.59 No 40 0.67 No 0 0 No -41 0.35 No 29 41.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 10826179 - NM_024894 NOL10 1 8.24 5.69 57 10.61 92.91 24 6.19 Yes 11 0.3 No 0 0 No -32 0.38 No 40 56.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65716462 + NM_015462 NOL11 1 0.73 1.9 54 9.45 91.39 28 5.29 No 15 -0.1 No 27 0.84 Yes -27 0.65 No 17 68.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 65733191 + NM_015462 NOL11 1 0.07 0.22 14 -0.8 0 64 6.78 Yes 13 0.96 Yes 0 0 No -25 0.67 Yes 45 78.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 65733624 + NM_015462 NOL11 1 0.07 0.21 13 -13.15 0 39 5.91 Yes 13 0.86 Yes 0 0 No -25 0.56 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65733627 + NM_015462 NOL11 1 0.07 0.19 13 -2.19 0 42 6.06 Yes 16 0.86 Yes 0 0 No -28 0.52 No 42 58.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65733947 + NM_015462 NOL11 1 0.26 0.75 33 -2.32 0 13 4.12 No 8 -1.68 No 21 0.91 Yes -19 0.41 No 51 39.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 65735050 + NM_015462 NOL11 1 0.04 0.11 7 -10.08 0 13 4.36 No 17 0.21 No 0 0 No -29 0.64 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65735067 + NM_015462 NOL11 1 0.54 1.94 61 4.59 83.75 19 5.23 No 6 0.87 Yes 0 0 No -22 0.71 Yes 48 69.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 65735074 + NM_015462 NOL11 1 0.15 0.53 28 -1.66 0 14 3.92 No 13 0.84 Yes 0 0 No -29 0.53 No 45 54.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65740040 + NM_015462 NOL11 1 0.81 1.33 45 6.41 92.51 34 5.65 Yes 54 1.21 Yes 23 0.73 Yes -34 0.37 No 36 35.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 38084327 + NM_024313 NOL12 1 0.17 0.19 11 -0.24 0 12 4.24 No 25 1.55 Yes 0 0 No -37 0.97 Yes 33 97.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38089338 + NM_024313 NOL12 1 0.15 0.18 10 8.61 93.78 25 5.1 No 12 0.84 Yes 24 0.96 Yes -24 0.93 Yes 46 96.63 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31052921 - NM_001256798 NOL4L 1 61.33 3.89 69 7.65 90.09 21 5.1 No 41 1.31 Yes 29 0.47 Yes -20 0.81 Yes 50 70.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 31052938 - NM_001256798 NOL4L 1 6.23 0.39 22 6.35 75.83 37 8.33 Yes 24 1.31 Yes 29 0.47 Yes -29 0.57 No 34 74.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 33463436 - NM_022917 NOL6 1 0.4 0.51 22 3.69 0 29 7 Yes 16 2.68 Yes 0 0 No -28 0.79 Yes 42 90.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33463990 - NM_022917 NOL6 1 0.8 1.08 43 8.54 84.5 22 7.35 Yes 9 1.45 Yes 0 0 No -21 0.88 Yes 49 90.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33464965 - NM_022917 NOL6 1 0.33 0.24 15 4.16 0 13 4.36 No 13 1.32 Yes 0 0 No -25 0.86 Yes 45 93.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33468168 - NM_022917 NOL6 1 0.28 0.32 15 -7.21 0 11 3.69 No 2 -1.63 No 26 0.77 Yes -26 0.35 No 19 50.62 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 33468556 - NM_022917 NOL6 1 0.15 0.22 14 -2.26 0 17 4.24 No 51 -4.98 No 0 0 No -31 0.74 Yes 39 90.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33469335 - NM_022917 NOL6 1 0.28 0.32 21 -3.76 0 20 5.73 Yes 14 0.78 Yes 0 0 No -26 0.92 Yes 44 90.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33469654 - NM_022917 NOL6 1 0.09 0.11 8 1.38 0 15 4.58 No 76 1.82 Yes 0 0 No -49 0.96 Yes 21 93.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 13616695 + NM_016167 NOL7 1 0.04 0.15 9 -13.16 0 27 5.97 Yes 25 0.6 No 0 0 No -26 0.88 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 13617975 + NM_016167 NOL7 1 0.05 0.21 13 4.16 80.57 20 5.26 No 7 1.03 Yes 24 0.85 Yes -23 0.8 Yes 47 72.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 13620647 + NM_016167 NOL7 1 0.03 0.21 13 -4.24 0 11 4.12 No 47 1.26 Yes 0 0 No -29 0.69 Yes 41 69.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 13620968 + NM_016167 NOL7 1 0.14 0.61 31 5.33 84.73 46 6.73 Yes 14 0.24 No 24 0.97 Yes -26 0.29 No 29 51.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 95061232 - NM_001256394 NOL8 1 0.26 0.26 15 -2.45 0 54 9.56 Yes 41 0.64 No 0 0 No -48 0.41 No 22 58.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95063089 - NM_001256394 NOL8 1 2.41 2.61 57 1.34 0 26 5.94 Yes 71 0.83 Yes 0 0 No -26 0.28 No 40 36.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 95063093 - NM_001256394 NOL8 1 1 0.97 40 0.3 84.41 22 5.65 Yes 67 0.84 Yes 26 0.71 Yes -26 0.25 No 44 42.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 95069305 - NM_001256394 NOL8 1 0.88 0.43 26 -8.07 81.56 23 5.97 Yes 10 0.6 No 0 0 No -22 0.89 Yes 48 71.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 95071314 - NM_001256394 NOL8 1 1.1 0.53 33 3.32 74.54 32 5.99 Yes 72 -1.67 No 0 0 No -31 0.59 No 44 66.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95073569 - NM_001256394 NOL8 1 0.14 0.14 9 5.84 74.53 19 3.5 No 0 0.27 No 23 0.71 Yes -18 0.87 Yes 52 90.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 95075253 - NM_001256394 NOL8 1 0.39 0.42 19 13.22 88.11 35 6.07 Yes 22 0.32 No 0 0 No -34 0.44 No 36 77.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 95082420 - NM_001256394 NOL8 1 0.83 1 49 4.91 83.99 27 5.29 No 38 -1.43 No 26 0.63 Yes -24 0.38 No 44 45.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 95082662 - NM_001256394 NOL8 1 1.55 1.88 53 5.13 86.1 34 4.99 No 53 0.19 No 30 0.53 Yes -21 0.74 Yes 51 64.08 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 95082665 - NM_001256394 NOL8 1 1.26 1.51 52 6.58 86.68 31 4.78 No 50 0.2 No 30 0.53 Yes -18 0.52 No 52 45.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 6586922 - NM_024654 NOL9 1 0.1 0.11 7 4.72 79.51 15 4.94 No 2 0.78 Yes 28 0.75 Yes -30 0.84 Yes 40 88.41 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 6596850 - NM_024654 NOL9 1 0.07 0.1 7 6.02 84.17 27 4.28 No 70 0.84 Yes 0 0 No -26 0.75 Yes 40 72.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6598049 - NM_024654 NOL9 1 0.1 0.14 7 4.74 84.41 32 6.57 Yes 39 1.78 Yes 0 0 No -31 0.77 Yes 39 74.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6604980 - NM_024654 NOL9 1 2.06 2.92 70 -1.76 72.88 36 6.08 Yes 23 0.56 No 0 0 No -30 0.51 No 35 65.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 6605063 - NM_024654 NOL9 1 0.6 0.78 41 6.24 82.82 26 5.23 No 4 1.25 Yes 0 0 No -22 0.59 No 48 60.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 6605239 - NM_024654 NOL9 1 0.06 0.1 7 -9.17 72.45 25 3.74 No 6 -2.38 No 0 0 No -30 0.82 Yes 40 75.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6606451 - NM_024654 NOL9 1 0.57 0.89 39 7.46 76.86 13 6.07 Yes 0 0.83 Yes 0 0 No -21 0.85 Yes 49 76.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103916945 + NM_001284389 NOLC1 1 0.15 0.31 17 4.62 84.89 15 5.1 No NA NA NA 24 0.43 Yes -25 0.56 No 45 64.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 103916945 + NM_001284389 NOLC1 1 84.25 189.39 72 4.62 84.89 15 5.1 No NA NA NA 24 0.43 Yes -25 0.56 No 45 64.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 103917808 + NM_001284389 NOLC1 1 0.18 0.9 36 2.18 79.35 32 7 Yes 19 1.54 Yes 0 0 No -31 0.77 Yes 39 92.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103919965 + NM_001284389 NOLC1 1 0.07 0.25 16 -0.92 69.33 67 8.54 Yes 54 0.3 No 20 0.54 Yes -36 0.77 Yes 25 78.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 103919978 + NM_001284389 NOLC1 1 0.05 0.18 7 1.97 78.01 10 4.63 No 67 0.29 No 20 0.54 Yes -58 0.4 No 12 53.93 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 103921013 + NM_001284389 NOLC1 1 0.33 1.6 55 9.09 87 22 6.32 Yes 9 1.04 Yes 0 0 No -21 0.57 No 49 78.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 156745164 + NM_138400 NOM1 1 2.64 2.01 60 6.32 81.18 20 5.92 Yes 7 0.85 Yes 22 0.5 Yes -30 0.37 No 34 49.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 156751299 + NM_138400 NOM1 1 4.22 2.47 58 7.4 86.08 28 3.69 No 37 0.49 No 27 0.64 Yes -27 0.79 Yes 43 80.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 156760403 + NM_138400 NOM1 1 0.54 0.22 13 5.24 80.12 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.76 Yes 51 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14968874 + NM_014287 NOMO1 1 3.98 1.06 45 3.1 71.28 29 5.39 No 57 0.89 Yes 20 0.42 Yes -28 0.84 Yes 42 75.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 14983769 + NM_014287 NOMO1 1 0.61 0.47 26 5.91 91.33 16 5.38 No 44 -2.59 No 0 0 No -20 0.42 No 50 49.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18570177 - NM_173614 NOMO2 1 0.1 0.17 10 3.05 77.72 28 7.68 Yes 15 1.01 Yes 27 0.81 Yes -27 0.8 Yes 43 90.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 70504248 + NM_001145408 NONO 1 0.03 0.13 7 -5.24 75.77 28 6.85 Yes 15 1.61 Yes 0 0 No -27 0.75 Yes 43 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70504251 + NM_001145408 NONO 1 0.05 0.17 9 -7.32 0 31 7.03 Yes 18 1.61 Yes 0 0 No -30 0.68 Yes 40 83.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70505214 + NM_001145408 NONO 1 4.47 1.11 50 10.13 88.95 38 6.23 Yes 53 1.28 Yes 0 0 No -30 0.29 No 33 48.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 70510460 + NM_001145408 NONO 1 0.78 0.14 10 3.75 72.53 15 5.25 No 20 1.23 Yes 23 0.82 Yes -24 0.6 No 46 52.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 70505214 + NM_001145408 NONO 1 0.52 0.14 8 10.13 88.95 38 6.23 Yes 53 1.28 Yes 0 0 No -30 0.29 No 33 48.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 70511607 + NM_001145408 NONO 1 0.03 0.28 15 -0.19 0 12 4.24 No 61 1.03 Yes 23 0.83 Yes -30 0.52 No 40 64.61 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 70511634 + NM_001145408 NONO 1 0.05 0.38 22 -0.3 0 9 3.87 No 13 1.27 Yes 0 0 No -25 0.67 Yes 45 84.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70513867 + NM_001145408 NONO 1 0.17 1.86 56 5.88 80.95 24 3.85 No -4 0.46 No 23 0.84 Yes -23 0.91 Yes 47 90.06 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 70514247 + NM_001145408 NONO 1 0.06 0.68 30 9.49 83.98 15 5.39 No 57 -2.03 No 26 0.74 Yes -26 0.79 Yes 44 80.88 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 70517210 + NM_001145408 NONO 1 0.03 0.29 16 -3.48 0 15 4.55 No 39 -3.61 No 18 0.71 Yes -20 0.31 No 52 30.19 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 70517437 + NM_001145408 NONO 1 0.01 0.13 8 7.28 85.51 83 7.36 Yes 63 1.66 Yes 0 0 No -38 0.76 Yes 32 69.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70518320 + NM_001145408 NONO 1 0.05 0.58 29 -7.26 81.65 22 5.29 No 9 0.11 No 0 0 No -21 0.85 Yes 49 72.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 70518327 + NM_001145408 NONO 1 0.02 0.21 12 -15.63 0 12 4 No 16 0.08 No 0 0 No -28 0.78 Yes 42 77.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 70519767 + NM_001145408 NONO 1 0.03 0.29 17 4.54 80.94 19 5.32 No 74 -6.31 No 26 0.87 Yes -19 0.56 No 51 61.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 34634252 - NM_018648 NOP10 1 0.07 0.58 30 9.31 85.65 27 5.7 Yes 72 1.46 Yes 26 0.92 Yes -26 0.93 Yes 44 95.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 34634313 - NM_018648 NOP10 1 0.47 3.92 71 -1.22 76.35 24 8.97 Yes 11 1.46 Yes 26 0.95 Yes -23 0.86 Yes 47 94.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 2941637 - NM_001291979 NOP14 1 0.08 0.15 8 7.26 86.21 17 4.34 No 19 1.78 Yes 0 0 No -20 0.57 No 46 44.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 2943504 - NM_001291979 NOP14 1 0.28 0.49 25 4.14 79.3 29 6.19 Yes 16 0 No 0 0 No -28 0.91 Yes 42 95.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 2944054 - NM_001291979 NOP14 1 3.55 7.47 72 6.92 80.93 28 5.83 Yes 53 0.9 Yes 0 0 No -27 0.79 Yes 43 85.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2945933 - NM_001291979 NOP14 1 0.12 0.19 13 11.5 92.47 16 5.46 No 32 1.38 Yes 0 0 No -44 0.47 No 47 61.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 2948253 - NM_001291979 NOP14 1 0.43 1.03 45 7.19 82.17 27 5.32 No 32 1.81 Yes 0 0 No -27 0.56 No 43 81.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 2949338 - NM_001291979 NOP14 1 0.03 0.1 7 -16.32 0 32 5.14 No 19 1.51 Yes 0 0 No -31 0.75 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 2950097 - NM_001291979 NOP14 1 1.78 4.29 69 4.17 80.55 17 4.8 No 4 0.46 No 0 0 No -16 0.43 No 49 51.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 2950157 - NM_001291979 NOP14 1 0.08 0.22 9 3.62 75.47 37 7.37 Yes 31 -2.77 No 23 0.6 Yes -25 0.44 No 45 57.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 175811256 - NM_001291308 NOP16 1 5.3 1.97 57 8.04 89.47 23 5.22 No 35 0.51 No 0 0 No -23 0.83 Yes 47 75.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 175811288 - NM_001291308 NOP16 1 22.12 8.06 72 0.49 77.87 31 4.53 No 3 0.53 No 25 0.67 Yes -25 0.63 No 45 55.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 175811376 - NM_001291308 NOP16 1 734.39 266.93 72 8.17 84.46 22 4.68 No 35 0.45 No 22 0.93 Yes -22 0.81 Yes 48 90.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6667280 - NM_006170 NOP2 1 0.11 0.28 18 6.2 87.77 27 5.74 Yes 41 1.23 Yes 0 0 No -53 0.73 Yes 17 86.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6667304 - NM_006170 NOP2 1 0.69 1.64 55 3.97 84.41 30 6.32 Yes 17 1.26 Yes 29 0.69 Yes -29 0.87 Yes 41 92.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 6669489 - NM_006170 NOP2 1 0.33 0.46 24 -1.06 0 55 7.41 Yes 42 1.09 Yes 0 0 No -48 0.86 Yes 22 87.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6669535 - NM_006170 NOP2 1 0.08 0.14 9 -0.74 0 9 3.87 No 69 -2.75 No 28 0.46 Yes -20 0.73 Yes 62 61.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 6669541 - NM_006170 NOP2 1 0.25 0.38 23 -1.44 0 15 4.36 No 63 -2.75 No 0 0 No -14 0.6 No 58 26.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6673415 - NM_006170 NOP2 1 0.66 1.24 48 4.77 90.11 22 5 No 56 0.77 No 26 0.74 Yes -26 0.52 No 22 78.48 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 6675503 - NM_006170 NOP2 1 119.4 98.19 72 4.58 75.64 26 5.19 No 70 -4.78 No 25 0.56 Yes -25 0.64 No 45 64.96 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 6677153 - NM_006170 NOP2 1 0.17 0.21 10 -3.02 60.63 39 5.89 Yes 26 0.47 No 27 0.58 Yes -38 0.67 Yes 32 43.04 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 2636583 + NR_027700 NOP56 1 0.05 0.29 16 6.7 0 30 6.8 Yes 17 2.24 Yes 25 0.95 Yes -29 0.89 Yes 41 92.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 2637117 + NR_027700 NOP56 1 0.18 0.38 18 2.29 70.86 52 7.92 Yes 19 0.92 Yes 0 0 No -31 0.86 Yes 39 82.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 2638018 + NR_027700 NOP56 1 1.45 7.99 71 9.75 87.51 23 4.8 No 10 0.89 Yes 22 0.8 Yes -22 0.71 Yes 43 67.11 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 2638284 + NR_027700 NOP56 1 0.19 1.01 42 3.57 0 22 4.57 No 41 0.95 Yes 0 0 No -21 0.77 Yes 49 64.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 203142874 + NM_015934 NOP58 1 0.29 1.29 44 0.67 56.38 29 8.2 Yes 16 1.11 Yes 0 0 No -32 0.35 No 29 48.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 203142934 + NM_015934 NOP58 1 2.17 8.25 71 8.13 89.06 22 4.86 No 41 1.82 Yes 0 0 No -21 0.75 Yes 45 67.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 203149049 + NM_015934 NOP58 1 0.08 0.32 17 7.57 74.62 33 5.83 Yes 54 0.67 No 32 0.72 Yes -32 0.74 Yes 38 81.91 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 203150253 + NM_015934 NOP58 1 0.03 0.17 10 6.33 83.18 20 7.07 Yes 7 1.18 Yes 0 0 No -19 0.63 No 51 88.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 203154722 + NM_015934 NOP58 1 0.03 0.14 8 5.42 84.17 65 8.05 Yes 52 0.49 No 0 0 No -50 0.46 No 13 64.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 203155015 + NM_015934 NOP58 1 0.02 0.11 7 2.66 70.27 52 5.77 Yes 31 0.36 No 32 0.53 Yes -43 0.48 No 27 65.55 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 203155743 + NM_015934 NOP58 1 1.14 3.96 68 9.43 90.66 31 4.63 No 8 0.26 No 30 0.67 Yes -20 0.44 No 50 67.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 203155811 + NM_015934 NOP58 1 0.03 0.13 8 3.55 71.59 58 8.75 Yes 21 0.78 Yes 22 0.86 Yes -33 0.43 No 13 69.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 203162080 + NM_015934 NOP58 1 0.02 0.1 7 -1.4 54.09 30 4.4 No 47 1.08 Yes 25 0.43 Yes -33 0.68 Yes 37 51.13 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 203164441 + NM_015934 NOP58 1 0.06 0.25 16 6.38 74.43 31 5.65 Yes 18 0.68 No 0 0 No -30 0.88 Yes 40 87.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 203164701 + NM_015934 NOP58 1 0.1 0.47 26 4.68 74.78 25 5.18 No 12 1.15 Yes 0 0 No -24 0.83 Yes 46 95.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203164736 + NM_015934 NOP58 1 0.02 0.11 7 -2.66 0 18 4.47 No 47 1.15 Yes 0 0 No -17 0.61 No 53 62.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 203164808 + NM_015934 NOP58 1 0.12 0.6 27 -0.57 59.42 70 6.17 Yes 15 0.98 Yes 0 0 No -27 0.89 Yes 43 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203165419 + NM_015934 NOP58 1 0.04 0.14 9 6.06 85.31 32 6.54 Yes 7 0.24 No 0 0 No -31 0.71 Yes 39 74.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 203168075 + NM_015934 NOP58 1 0.03 0.19 9 6.31 74.69 53 6.97 Yes 55 0.93 Yes 26 0.8 Yes -29 0.45 No 54 50.38 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 24770775 + NM_174913 NOP9 1 9.45 13.24 72 6.15 72.82 32 5.98 Yes 12 0.44 No 23 0.67 Yes -31 0.95 Yes 39 97.66 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24770820 + NM_174913 NOP9 1 1.47 2.03 66 0.92 75.51 16 6.46 Yes 27 0.86 Yes 0 0 No -26 0.86 Yes 44 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24771465 + NM_174913 NOP9 1 0.22 0.18 11 -0.58 0 23 6.06 Yes 35 2.2 Yes 0 0 No -30 0.31 No 40 35.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24772187 + NM_174913 NOP9 1 1.34 1.4 49 6.64 78.89 32 6.71 Yes 19 1.02 Yes 0 0 No -31 0.79 Yes 39 69.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 24773309 + NM_174913 NOP9 1 0.17 0.14 8 4.13 84.38 28 5.66 Yes 74 1.17 Yes 0 0 No -27 0.87 Yes 43 82.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24774151 + NM_174913 NOP9 1 0.07 0.11 8 -5.31 0 18 4.09 No 19 0.46 No 0 0 No -31 0.76 Yes 39 71.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 50059915 - NM_015953 NOSIP 1 0.15 0.21 12 3.55 71.16 26 7.42 Yes 55 1.9 Yes 25 0.94 Yes -25 0.91 Yes 45 85.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50061203 - NM_015953 NOSIP 1 0.09 0.15 10 6.48 87.88 32 5.28 No 11 0.09 No 23 0.93 Yes -23 0.92 Yes 47 91.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50061457 - NM_015953 NOSIP 1 0.24 0.39 22 6.28 80.44 29 7.26 Yes 75 1.12 Yes 28 0.87 Yes -28 0.86 Yes 42 84.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50062231 - NM_015953 NOSIP 1 0.33 0.56 24 2 0 42 7.33 Yes 13 0.78 Yes 20 0.9 Yes -25 0.76 Yes 45 92.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50062761 - NM_015953 NOSIP 1 0.07 0.13 9 2.9 0 27 5.49 No 14 0.23 No 0 0 No -26 0.8 Yes 44 88.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139402033 - NM_017617 NOTCH1 1 0.11 0.14 9 9.78 88.32 30 6 Yes 40 -0.98 No 0 0 No -29 0.37 No 41 48.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139405253 - NM_017617 NOTCH1 1 0.18 0.25 13 2.51 0 33 7.24 Yes 20 1.43 Yes 0 0 No -32 0.82 Yes 38 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139407531 - NM_017617 NOTCH1 1 0.06 0.1 7 5.21 76.4 33 3.92 No 21 -1.38 No 0 0 No -33 0.58 No 58 49.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139410058 - NM_017617 NOTCH1 1 0.17 0.22 13 4.66 86.01 20 6.78 Yes 7 1.26 Yes 0 0 No -19 0.56 No 45 49.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139419423 - NM_017617 NOTCH1 1 0.2 0.18 8 7.99 81.03 28 5.37 No 15 0.54 No 0 0 No -27 0.87 Yes 43 88.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139437459 - NM_017617 NOTCH1 1 1.01 0.69 34 4.74 82.39 76 8.19 Yes 22 1.25 Yes 0 0 No -34 0.74 Yes 36 89.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 145227040 + NM_203458 NOTCH2NL 1 1.23 0.28 16 6.79 81.41 17 5.72 Yes 4 0.55 No 30 0.71 Yes -16 0.51 No 39 55.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 145248820 + NM_203458 NOTCH2NL 1 14.54 2.36 43 2.26 0 17 4.12 No 20 1.56 Yes 0 0 No -32 0.63 No 38 75.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108032763 - NM_002519 NPAT 1 3.68 3.11 65 -3.19 0 9 3.87 No 24 -1.73 No 28 0.31 Yes -31 0.55 No 39 67.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 108032769 - NM_002519 NPAT 1 1.95 1.65 58 2.19 78.3 23 5.29 No 18 -1.74 No 28 0.31 Yes -25 0.57 No 45 78.1 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 108042996 - NM_002519 NPAT 1 0.13 0.13 9 3.94 80.06 60 7.09 Yes 12 1.22 Yes 0 0 No -24 0.61 No 46 58.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108044802 - NM_002519 NPAT 1 0.09 0.1 7 5.27 75.08 44 7.23 Yes 31 1.1 Yes 0 0 No -43 0.63 No 27 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108059929 - NM_002519 NPAT 1 0.56 0.56 32 10.6 89.78 20 5.54 No 34 1.57 Yes 0 0 No -19 0.48 No 51 63.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108059929 - NM_002519 NPAT 1 0.1 0.13 8 10.6 89.78 20 5.54 No 34 1.57 Yes 0 0 No -19 0.48 No 51 63.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108062977 - NM_002519 NPAT 1 0.11 0.11 7 9.4 86.32 33 5.66 Yes 24 0.22 No 0 0 No -32 0.43 No 44 62.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108075294 - NM_002519 NPAT 1 0.37 0.28 16 0.57 0 18 4.24 No 19 -0.75 No 0 0 No -29 0.65 No 41 66.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108081284 - NM_002519 NPAT 1 0.33 0.24 13 4.45 77.77 13 5.12 No 45 -4.01 No 0 0 No -31 0.27 No 39 69.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108081939 - NM_002519 NPAT 1 3.2 2.4 60 10.18 87.82 29 7.03 Yes 16 1.41 Yes 0 0 No -28 0.96 Yes 42 97.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108084921 - NM_002519 NPAT 1 0.93 0.65 33 2.57 70.29 57 6.44 Yes 60 0.52 No 0 0 No -25 0.82 Yes 45 61.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 21115640 - NM_000271 NPC1 1 1.52 1.15 46 5.95 80.55 18 5.14 No 38 0.57 No 0 0 No -27 0.38 No 43 82.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 21148877 - NM_000271 NPC1 1 0.13 0.13 9 6.21 80.75 19 5 No 46 1.24 Yes 0 0 No -24 0.31 No 52 57.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 21153527 - NM_000271 NPC1 1 0.46 0.1 7 3.33 0 19 4.58 No 11 1.32 Yes 0 0 No -23 0.63 No 47 45.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 74946976 - NM_006432 NPC2 1 0.06 0.17 9 3.31 74.93 21 5 No 60 0.53 No 0 0 No -24 0.79 Yes 46 53.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 45609614 + NM_006310 NPEPPS 1 0.86 0.56 28 9.83 87.88 25 5.92 Yes 12 1.52 Yes 0 0 No -24 0.68 Yes 46 81.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45654410 + NM_006310 NPEPPS 1 0.39 0.44 22 10.21 89.18 25 8.7 Yes 12 1.06 Yes 24 0.73 Yes -25 0.66 Yes 45 72.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45654446 + NM_006310 NPEPPS 1 0.08 0.1 7 5.29 78.49 31 6.58 Yes 48 1.07 Yes 30 0.48 Yes -30 0.69 Yes 40 82.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45663543 + NM_006310 NPEPPS 1 0.05 0.1 7 5.05 80.78 21 6.24 Yes 8 1.25 Yes 0 0 No -20 0.69 Yes 50 50.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 45669269 + NM_006310 NPEPPS 1 2.81 1.86 56 2.06 80.67 24 4.72 No 76 -3.92 No 23 0.71 Yes -23 0.6 No 47 47.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 45673720 + NM_006310 NPEPPS 1 0.05 0.13 7 1.59 85.58 22 4.46 No 56 0.18 No 0 0 No -21 0.34 No 46 44.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 45682831 + NM_006310 NPEPPS 1 0.24 0.83 37 7.34 84.82 37 7.01 Yes 24 1.43 Yes 20 0.7 Yes -37 0.71 Yes 33 77.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45683288 + NM_006310 NPEPPS 1 0.05 0.14 9 6.87 85.8 28 5.19 No 71 0.51 No 0 0 No -53 0.46 No 17 62.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 45691522 + NM_006310 NPEPPS 1 0.04 0.1 7 8.08 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.58 No 51 68.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 45694604 + NM_006310 NPEPPS 1 0.32 0.94 37 12.55 90.32 37 6.85 Yes 24 1.21 Yes 0 0 No -37 0.55 No 34 60.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 45696643 + NM_006310 NPEPPS 1 2.26 4.49 69 7.61 87.33 52 6.39 Yes 72 0.83 Yes 18 0.19 Yes -38 0.76 Yes 32 82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 45698300 + NM_006310 NPEPPS 1 0.05 0.11 8 2.17 82.51 57 6.63 Yes 44 0.15 No 0 0 No -26 0.7 Yes 35 52.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 45699145 + NM_006310 NPEPPS 1 0.21 0.57 14 -8.04 0 20 4.58 No 49 1.22 Yes 0 0 No -41 0.38 No 29 46.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 132325870 - NR_037804 NPHP3-ACAD11 1 5.51 1.67 49 9.33 87.49 22 5.29 No 40 1.2 Yes 0 0 No -21 0.52 No 49 62.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 132359551 - NR_037804 NPHP3-ACAD11 1 0.48 0.13 9 9.95 85.84 32 5.44 No 59 0.53 No 0 0 No -31 0.72 Yes 39 58.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 5925171 - NM_015102 NPHP4 1 1.02 0.11 7 9.97 87.93 25 4.06 No 60 2.14 Yes 0 0 No -22 0.61 No 48 68.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 5925276 - NM_015102 NPHP4 1 4.31 0.19 14 10.06 83.23 18 5.46 No NA NA NA 0 0 No -23 0.55 No 47 58.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 5939693 - NM_015102 NPHP4 1 2.36 0.19 12 6.1 77.35 21 6.16 Yes 5 -0.89 No 29 0.56 Yes -20 0.86 Yes 50 56.76 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 5964807 - NM_015102 NPHP4 1 15.42 1.82 55 9.03 87.82 25 5.46 No 70 0.87 Yes 0 0 No -25 0.49 No 46 44.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 5965536 - NM_015102 NPHP4 1 0.83 0.15 10 4.37 0 11 4.12 No -2 0.1 No 0 0 No -27 0.61 No 43 71.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 5982245 - NM_015102 NPHP4 1 2.53 0.22 11 11.27 87.59 20 6.13 Yes 48 0.56 No 0 0 No -19 0.46 No 51 46.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 5987935 - NM_015102 NPHP4 1 2.81 0.26 17 4.27 0 19 4.58 No 11 0.49 No 0 0 No -18 0.93 Yes 52 93.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6037556 - NM_015102 NPHP4 1 3.27 0.49 29 3.7 85.4 26 5.1 No 75 0.51 No 0 0 No -25 0.78 Yes 45 68.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 30239383 - NM_001321892 NPIPB13 1 0.63 0.15 10 3.43 80.49 21 4.69 No 24 0.28 No 0 0 No -20 0.89 Yes 50 86.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 182763392 + NM_030769 NPL 1 1.14 0.1 7 1.44 68.49 48 7.35 Yes 35 1.32 Yes 0 0 No -40 0.61 No 30 59.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 182764864 + NM_030769 NPL 1 8.69 0.4 21 4.56 70.15 36 5.21 No 20 0.98 Yes 38 0.53 Yes -38 0.42 No 32 72.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 182767206 + NM_030769 NPL 1 2.5 0.26 16 2.92 71.56 50 6.3 Yes 41 -0.84 No 0 0 No -28 0.76 Yes 42 71.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 182775553 + NM_030769 NPL 1 1.91 0.32 20 10.83 88.13 14 5.26 No 66 -2.26 No 0 0 No -22 0.55 No 48 48.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 182798737 + NM_030769 NPL 1 1.8 0.26 17 8.19 95.16 30 4.99 No 11 0.25 No 23 0.78 Yes -23 0.56 No 42 43.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 182798737 + NM_030769 NPL 1 3.07 0.44 19 8.19 95.16 30 4.99 No 11 0.25 No 23 0.78 Yes -23 0.56 No 42 43.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79527656 - NM_017921 NPLOC4 1 0.2 0.35 19 6.5 86.2 22 6.9 Yes 9 0.59 No 21 0.91 Yes -21 0.87 Yes 49 80.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79527703 - NM_017921 NPLOC4 1 0.39 0.68 35 0.94 83.28 47 7 Yes 40 0.2 No 0 0 No -46 0.37 No 24 52.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79528337 - NM_017921 NPLOC4 1 0.09 0.15 8 4.82 75.46 26 8.06 Yes 13 1.21 Yes 0 0 No -25 0.69 Yes 38 68.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 79531006 - NM_017921 NPLOC4 1 1.1 1.82 56 2.68 82.04 21 5.08 No 76 1.74 Yes 20 0.77 Yes -45 0.48 No 50 50 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79531273 - NM_017921 NPLOC4 1 0.13 0.24 15 7.8 78.01 67 8.65 Yes 54 1.04 Yes 24 0.64 Yes -24 0.52 No 47 51.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 79532629 - NM_017921 NPLOC4 1 0.14 0.28 17 -0.23 0 36 6.24 Yes 38 0.6 No 0 0 No -32 0.54 No 41 47.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79533568 - NM_017921 NPLOC4 1 0.05 0.13 8 9.13 75.35 45 6.78 Yes 45 0.77 No 0 0 No -44 0.65 No 31 60.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79534549 - NM_017921 NPLOC4 1 0.06 0.15 9 0.06 0 14 4.47 No 21 1.12 Yes 29 0.46 Yes -33 0.61 No 37 79.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 79535098 - NM_017921 NPLOC4 1 0.15 0.43 21 -1.15 0 43 6.39 Yes 30 1.66 Yes 0 0 No -42 0.74 Yes 32 79.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79535102 - NM_017921 NPLOC4 1 0.19 0.5 23 4.77 83.77 39 6.1 Yes 26 1.68 Yes 34 0.8 Yes -38 0.69 Yes 36 79.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79552686 - NM_017921 NPLOC4 1 0.06 0.11 7 11.04 78.04 27 6.4 Yes 14 1.57 Yes 0 0 No -26 0.85 Yes 44 80.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79556146 - NM_017921 NPLOC4 1 1.29 2.89 64 3.71 82.72 14 3.79 No 51 -3.59 No 19 0.49 Yes -48 0.35 No 32 35.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79561798 - NM_017921 NPLOC4 1 0.08 0.17 11 9.7 86.43 27 5.67 Yes 14 0.73 No 0 0 No -26 0.86 Yes 44 92.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79571231 - NM_017921 NPLOC4 1 0.22 0.54 29 6.68 82.52 26 4.71 No 25 1.33 Yes 0 0 No -25 0.75 Yes 33 83.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79571751 - NM_017921 NPLOC4 1 0.27 0.72 28 -4.08 62.33 31 5.73 Yes 31 0.48 No 0 0 No -30 0.88 Yes 40 83.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79575946 - NM_017921 NPLOC4 1 0.16 0.44 26 1.9 74.63 24 6.56 Yes 48 0.38 No 23 0.9 Yes -23 0.89 Yes 47 80.34 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79579900 - NM_017921 NPLOC4 1 0.45 1.22 53 9.68 77.27 25 4.84 No 12 0.3 No 24 0.85 Yes -29 0.73 Yes 46 72.21 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79580488 - NM_017921 NPLOC4 1 0.06 0.15 9 3.5 77.93 39 6.27 Yes 45 0.02 No 0 0 No -25 0.66 No 45 78.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 79589252 - NM_017921 NPLOC4 1 0.16 0.24 14 4.75 72.63 26 7.07 Yes 13 0.64 No 0 0 No -25 0.7 Yes 45 71.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79593797 - NM_017921 NPLOC4 1 0.37 0.68 30 8.3 88.26 30 4.47 No 32 1.59 Yes 0 0 No -29 0.36 No 41 39.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 79603505 - NM_017921 NPLOC4 1 0.12 0.13 9 8.01 80.27 42 7.51 Yes 29 2 Yes 30 0.92 Yes -30 0.72 Yes 40 81.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 170817009 + NM_002520 NPM1 1 0 0.19 10 1.46 0 16 3.8 No 19 1.98 Yes 0 0 No -31 0.75 Yes 39 75.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 170817030 + NM_002520 NPM1 1 0.05 3.44 46 6.49 82.37 31 4.33 No 40 1.99 Yes 26 0.77 Yes -23 0.8 Yes 47 72.13 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 170817057 + NM_002520 NPM1 1 0.01 0.65 30 -22.4 0 30 5.83 Yes 67 1.99 Yes 28 0.65 Yes -27 0.4 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 170817068 + NM_002520 NPM1 1 0 0.1 7 -0.48 71.33 19 4.28 No 66 0.71 No 28 0.65 Yes -38 0.63 No 32 60.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 170819918 + NM_002520 NPM1 1 0.01 0.46 28 -12.19 0 29 5.31 No 34 0.35 No 0 0 No -28 0.94 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 170819919 + NM_002520 NPM1 1 0 0.28 16 -17.36 0 30 5.39 No 35 0.35 No 0 0 No -29 0.94 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 170827141 + NM_002520 NPM1 1 0 0.38 21 -7.06 0 19 4.71 No -4 0.15 No 24 0.83 Yes -9 0.59 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 170827153 + NM_002520 NPM1 1 0 0.11 7 -7.22 0 13 4.66 No 0 0.95 Yes 24 0.83 Yes -21 0.88 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 170832306 + NM_002520 NPM1 1 0.01 0.61 29 -0.91 0 30 7.24 Yes 17 0.7 No 0 0 No -32 0.82 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 170832312 + NM_002520 NPM1 1 0 0.15 9 -7.68 0 10 4 No 23 0.67 No 0 0 No -38 0.78 Yes 32 84.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 170833348 + NM_002520 NPM1 1 0.01 0.75 13 3.19 71.22 43 8.15 Yes 30 1.32 Yes 0 0 No -23 0.58 No 47 51.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 170833400 + NM_002520 NPM1 1 25.37 1160.69 72 7.95 88.45 32 7.79 Yes 51 0.89 Yes 31 0.86 Yes -31 0.78 Yes 39 72.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 170834132 + NM_002520 NPM1 1 0.1 4.53 70 7.63 76.77 29 5.27 No 7 0.91 Yes 0 0 No -25 0.72 Yes 45 71.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 170837488 + NM_002520 NPM1 1 0.03 0.76 15 1.63 68.71 21 5.84 Yes 0 0.07 No 28 0.85 Yes -21 0.46 No 45 62.29 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 21884855 + NM_001286680 NPM2 1 2.38 0.19 13 6.6 85.79 35 6.4 Yes 22 1.02 Yes 0 0 No -34 0.78 Yes 36 89.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103541838 - NM_006993 NPM3 1 0.04 0.14 9 4.4 72.96 30 8.49 Yes 17 1 Yes 0 0 No -29 0.81 Yes 41 80.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103542104 - NM_006993 NPM3 1 0.03 0.11 8 2.74 0 25 6.24 Yes 12 0.84 Yes 0 0 No -24 0.94 Yes 46 95.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103542145 - NM_006993 NPM3 1 0.14 0.5 24 0.39 56.69 23 4.85 No 75 0.48 No 27 0.5 Yes -22 0.74 Yes 48 79.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 50386478 - NM_006545 NPRL2 1 0.26 0.15 9 -4.38 64.87 20 4.59 No 3 -1.43 No 25 0.86 Yes -19 0.87 Yes 51 87.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 50386922 - NM_006545 NPRL2 1 3.11 1.6 53 1.72 0 30 7.31 Yes 61 -2.74 No 25 0.77 Yes -29 0.7 Yes 41 73.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 50386922 - NM_006545 NPRL2 1 0.7 0.36 18 1.72 0 30 7.31 Yes 61 -2.74 No 25 0.77 Yes -29 0.7 Yes 41 73.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 50387260 - NM_006545 NPRL2 1 8.91 3.18 68 -0.67 0 26 6.86 Yes 13 1.89 Yes 20 0.91 Yes -25 0.9 Yes 45 88.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 137239 - NM_001243249 NPRL3 1 0.27 0.29 19 5.39 69.13 27 5.08 No 14 0.71 No 0 0 No -26 0.8 Yes 44 72.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 139847 - NM_001243249 NPRL3 1 2.21 2.53 66 6.48 81.56 22 3.77 No 60 1.64 Yes 0 0 No -20 0.94 Yes 50 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 139865 - NM_001243249 NPRL3 1 0.36 0.43 23 2.7 74.52 28 5.48 No 42 1.63 Yes 0 0 No -27 0.95 Yes 43 73.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 139952 - NM_001243249 NPRL3 1 0.15 0.14 9 5.92 81.86 10 4.53 No -3 0.61 No 0 0 No -26 0.66 Yes 44 45.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 139976 - NM_001243249 NPRL3 1 0.26 0.33 14 6.55 69.91 9 5.38 No 46 0.07 No 0 0 No -22 0.35 No 48 65.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 145115 - NM_001243249 NPRL3 1 0.15 0.19 12 3.16 72.73 16 5.19 No 76 -2.96 No 0 0 No -22 0.8 Yes 48 84.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 148273 - NM_001243249 NPRL3 1 0.17 0.17 10 4.26 76.53 23 5.88 Yes 34 0.84 Yes 0 0 No -19 0.48 No 41 64.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 149054 - NM_001243249 NPRL3 1 0.14 0.17 9 8.51 82.54 22 5.74 Yes 9 0.48 No 0 0 No -21 0.85 Yes 49 72.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 158436 - NM_001243249 NPRL3 1 0.12 0.13 9 10.64 95 21 6.76 Yes 8 1.17 Yes 0 0 No -27 0.54 No 43 56.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 167375 - NM_001243249 NPRL3 1 269.66 66.51 72 8.68 88.41 25 5.26 No 43 0.95 Yes 24 0.88 Yes -24 0.85 Yes 46 88.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 175048 - NM_001243249 NPRL3 1 0.64 0.36 21 4.14 78.32 28 4.16 No 3 0.75 No 0 0 No -27 0.48 No 16 65.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 175067 - NM_001243249 NPRL3 1 0.36 0.22 11 -4.2 0 9 3.87 No 22 0.4 No 0 0 No -35 0.57 No 35 60.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 175073 - NM_001243249 NPRL3 1 14.49 7.79 72 2.3 84.41 29 5.83 Yes 16 0.41 No 28 0.36 Yes -29 0.54 No 41 61.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 175073 - NM_001243249 NPRL3 1 0.43 0.22 14 2.3 84.41 29 5.83 Yes 16 0.41 No 28 0.36 Yes -29 0.54 No 41 61.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 175153 - NM_001243249 NPRL3 1 0.48 0.29 17 10.63 93.22 22 5.29 No 9 0.22 No 0 0 No -21 0.72 Yes 49 85.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 186742 - NM_001243249 NPRL3 1 0.13 0.11 8 12.81 94.64 33 6.78 Yes 20 1.5 Yes 0 0 No -32 0.66 No 41 73.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 73853382 - NM_012428 NPTN 1 0.17 0.39 22 2.18 0 13 4.12 No 33 0.71 No 0 0 No -34 0.41 No 36 70.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 73853388 - NM_012428 NPTN 1 0.08 0.18 11 -16.88 0 29 6.65 Yes 27 0.71 No 0 0 No -28 0.48 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 73864436 - NM_012428 NPTN 1 0.08 0.11 8 -0.04 0 20 4.25 No 51 -4.23 No 0 0 No -20 0.48 No 50 30.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 3010290 + NM_001318940 NQO2 1 2.4 0.29 17 4.82 81.93 30 5.06 No 6 0.85 Yes 0 0 No -18 0.49 No 52 60.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 3018426 + NM_001318940 NQO2 1 2.51 0.38 20 3.95 81.35 19 8.59 Yes 36 1.3 Yes 0 0 No -18 0.67 Yes 52 76.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 24004714 + NM_001145425 NR1D2 1 2.18 0.28 17 -1 69.06 45 6.8 Yes 32 0.8 Yes 26 0.71 Yes -44 0.58 No 22 80.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 24006755 + NM_001145425 NR1D2 1 2.17 0.15 8 3.36 0 34 8.08 Yes 21 1.12 Yes 0 0 No -33 0.7 Yes 37 84.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50880809 + NM_007121 NR1H2 1 0.33 0.49 26 3.8 73.27 22 5.39 No -1 2 Yes 21 0.92 Yes -21 0.65 No 49 76.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 50881039 + NM_007121 NR1H2 1 0.2 0.18 11 3.69 70.03 36 6.48 Yes 71 1.13 Yes 0 0 No -35 0.94 Yes 35 90.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50882348 + NM_007121 NR1H2 1 0.1 0.14 9 0.37 0 28 5.48 No 0 -0.88 No 27 0.89 Yes -27 0.92 Yes 43 38.71 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 50882390 + NM_007121 NR1H2 1 2.55 3.88 68 7.25 87.02 24 5.1 No 11 1.1 Yes 23 0.97 Yes -23 0.9 Yes 47 90.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50885787 + NM_007121 NR1H2 1 0.85 0.68 31 3.4 74.09 22 5.29 No 33 -2.88 No 0 0 No -21 0.72 Yes 49 34.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 47289779 + NM_005693 NR1H3 1 1.69 0.14 10 1.04 69.76 45 6.52 Yes 64 -3.07 No 21 0.75 Yes -31 0.49 No 28 77.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 95418593 - NM_003297 NR2C1 1 0.27 0.14 8 -0.89 65.65 52 7.76 Yes 39 1.17 Yes 0 0 No -45 0.59 No 19 37.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 95422286 - NM_003297 NR2C1 1 14.35 3.99 71 1.07 68.39 23 3.47 No 11 -2.81 No 22 0.49 Yes -22 0.83 Yes 48 77.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 95422286 - NM_003297 NR2C1 1 0.56 0.13 8 1.07 68.39 23 3.47 No 11 -2.81 No 22 0.49 Yes -22 0.83 Yes 48 77.11 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 95424406 - NM_003297 NR2C1 1 5.64 1.49 54 6.81 83.38 38 6.96 Yes 18 0.53 No 30 0.64 Yes -30 0.29 No 44 44.98 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 95424650 - NM_003297 NR2C1 1 5.96 1.54 51 10.83 84.14 45 5.55 No 47 0.33 No 21 0.58 Yes -21 0.33 No 40 59.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 95445566 - NM_003297 NR2C1 1 0.92 0.47 24 4.7 67.42 28 5.25 No 15 0.71 No 0 0 No -27 0.52 No 43 44.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 95445604 - NM_003297 NR2C1 1 0.32 0.15 9 0.47 67.47 23 5.62 Yes 31 0.34 No 0 0 No -22 0.73 Yes 48 73.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 95451189 - NM_003297 NR2C1 1 2.92 1.38 50 4.94 62.01 34 6.08 Yes 71 1.45 Yes 0 0 No -31 0.83 Yes 39 89.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 95451412 - NM_003297 NR2C1 1 1.3 0.46 25 -1.01 0 13 4.12 No 7 1.15 Yes 0 0 No -37 0.77 Yes 33 83.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 95456664 - NM_003297 NR2C1 1 1.62 0.61 30 10 90.11 41 7.76 Yes 28 0.3 No 20 0.21 Yes -40 0.69 Yes 30 78.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 95461164 - NM_003297 NR2C1 1 2.53 0.93 39 1.13 0 34 6.28 Yes 52 0.31 No 29 0.71 Yes -33 0.52 No 40 37.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 15046050 + NM_003298 NR2C2 1 14.14 1.92 57 -1.22 63.11 39 7.65 Yes 10 1.1 Yes 21 0.94 Yes -26 0.59 No 48 41.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 15054953 + NM_003298 NR2C2 1 0.92 0.13 8 8.05 90.47 25 5.76 Yes 12 1.26 Yes 0 0 No -24 0.94 Yes 46 94.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15055377 + NM_003298 NR2C2 1 0.74 0.31 17 1.65 79.8 26 7.6 Yes 13 1.89 Yes 0 0 No -25 0.82 Yes 45 89.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15058642 + NM_003298 NR2C2 1 0.49 0.18 9 6.33 82.16 32 6.48 Yes 52 -1.19 No 0 0 No -35 0.76 Yes 35 81.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 15064714 + NM_003298 NR2C2 1 1.47 1 42 -1.75 0 16 4.12 No 24 0.64 No 0 0 No -36 0.68 Yes 34 74.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 15067713 + NM_003298 NR2C2 1 0.23 0.15 8 8.11 87.64 23 6.78 Yes 10 1.31 Yes 0 0 No -22 0.93 Yes 48 94.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15071838 + NM_003298 NR2C2 1 0.47 0.21 15 2.56 75.44 24 4.9 No 68 0.52 No 0 0 No -23 0.55 No 47 67.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 15076180 + NM_003298 NR2C2 1 0.8 0.43 25 3.11 0 27 5.74 Yes 14 0.98 Yes 0 0 No -26 0.9 Yes 44 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15076969 + NM_003298 NR2C2 1 0.37 0.13 7 9.6 88.01 23 4.67 No 10 1.17 Yes 0 0 No -29 0.82 Yes 41 56.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 19312849 - NM_001300945 NR2C2AP 1 10.7 5.81 69 -1.94 0 32 5.92 Yes 5 1.49 Yes 0 0 No -31 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 19312857 - NM_001300945 NR2C2AP 1 14.19 7.64 72 -3.27 0 24 5.2 No -3 0.64 No 23 0.9 Yes -23 0.83 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 142689014 - NM_001204265 NR3C1 1 0.09 0.21 12 7.67 83.57 27 5.56 Yes 35 0.43 No 0 0 No -26 0.85 Yes 44 76.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 142689045 - NM_001204265 NR3C1 1 0.15 0.44 21 10.3 85.13 25 4.92 No 4 0.47 No 0 0 No -29 0.88 Yes 41 57.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 142706780 - NM_001204265 NR3C1 1 0.2 0.68 34 11.13 89.36 24 4.4 No 32 0.19 No 0 0 No -36 0.6 No 34 68.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 142718642 - NM_001204265 NR3C1 1 0.1 0.38 18 4.75 78.71 29 5.66 Yes 59 -5.26 No 0 0 No -28 0.86 Yes 42 95.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 142733305 - NM_001204265 NR3C1 1 0.38 1.28 53 7.63 78.07 23 4.9 No 10 0.82 Yes 0 0 No -29 0.68 Yes 41 75.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127285068 - NM_033334 NR6A1 1 0.68 0.13 8 -0.25 0 33 6.81 Yes 20 2.47 Yes 0 0 No -32 0.79 Yes 38 85.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127300596 - NM_033334 NR6A1 1 43.98 5.53 71 5.8 85.85 25 5.1 No 54 1.26 Yes 21 0.92 Yes -24 0.96 Yes 46 93.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 115252343 - NM_002524 NRAS 1 0.03 0.14 8 -2.64 0 10 4 No 38 1.67 Yes 0 0 No -28 0.62 No 42 71.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 115252364 - NM_002524 NRAS 1 0.05 0.21 12 -3.18 0 30 6.48 Yes 17 1.7 Yes 29 0.8 Yes -29 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 115253111 - NM_002524 NRAS 1 0.17 0.68 35 6.92 89.58 76 11.78 Yes 63 3 Yes 0 0 No -34 0.48 No 15 12.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 115256589 - NM_002524 NRAS 1 0.08 0.29 16 0.43 0 14 4.47 No 16 1.41 Yes 0 0 No -53 0.35 No 17 53.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 64899450 + NM_030759 NRBF2 1 0.89 0.78 29 11.53 97.47 35 6 Yes 22 0.43 No 0 0 No -35 0.39 No 35 77.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 64906139 + NM_030759 NRBF2 1 0.23 0.26 15 0.89 75.48 29 4.58 No 13 1.1 Yes 0 0 No -28 0.39 No 42 52.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 64909893 + NM_030759 NRBF2 1 1.78 1.94 55 7.67 85.86 27 6.16 Yes 14 1.37 Yes 0 0 No -26 0.91 Yes 44 95.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 64909896 + NM_030759 NRBF2 1 0.13 0.14 8 5.79 87 30 6.4 Yes 17 1.35 Yes 0 0 No -29 0.92 Yes 41 95.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27656120 + NM_001321358 NRBP1 1 11.41 10.85 72 2.67 0 45 7.93 Yes 32 2.16 Yes 39 0.81 Yes -44 0.83 Yes 26 91.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27659916 + NM_001321358 NRBP1 1 0.46 1.13 45 3.31 76.89 30 5.57 Yes 17 1.27 Yes 0 0 No -29 0.95 Yes 41 95.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27662635 + NM_001321358 NRBP1 1 0.07 0.18 10 -14.28 76.22 26 5.66 Yes 60 -1.79 No 0 0 No -25 0.86 Yes 45 84.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 27664151 + NM_001321358 NRBP1 1 0.04 0.11 7 -0.79 73.4 16 5.2 No 23 2.03 Yes 0 0 No -43 0.86 Yes 27 76.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144921291 - NM_178564 NRBP2 1 3.09 0.22 12 1.96 74.42 25 4.95 No 38 -1.35 No 20 0.84 Yes -20 0.65 No 50 38.75 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52258093 - NM_001101662 NRDC 1 0.17 0.47 24 3.96 0 23 6.24 Yes 10 1.44 Yes 0 0 No -22 0.82 Yes 48 80.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52260548 - NM_001101662 NRDC 1 0.11 0.28 15 -9.94 0 17 4.36 No 72 -4.55 No 28 0.91 Yes -7 0.42 No 63 22.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52260881 - NM_001101662 NRDC 1 0.26 0.67 30 8.78 95.55 38 4.42 No 14 0.64 No 26 0.73 Yes -26 0.68 Yes 44 62.57 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 52269140 - NM_001101662 NRDC 1 0.04 0.14 10 4.86 0 29 6.48 Yes 16 1.95 Yes 0 0 No -28 0.81 Yes 42 86.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52269581 - NM_001101662 NRDC 1 0.03 0.11 8 -0.22 69.36 43 7.89 Yes 30 0.53 No 0 0 No -22 0.6 No 48 69.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52269664 - NM_001101662 NRDC 1 0.05 0.17 9 4.5 71.67 40 6.25 Yes 32 0.48 No 30 0.42 Yes -24 0.78 Yes 35 45.18 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 52277767 - NM_001101662 NRDC 1 0.13 0.33 20 3.31 0 21 6.43 Yes 8 0.43 No 0 0 No -25 0.41 No 45 41.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52279761 - NM_001101662 NRDC 1 0.05 0.18 12 -14.09 0 24 4.98 No 71 1.9 Yes 22 0.9 Yes -23 0.91 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 52280485 - NM_001101662 NRDC 1 0.21 0.38 21 -13.78 0 30 6.27 Yes 17 0.78 Yes 0 0 No -29 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 52282083 - NM_001101662 NRDC 1 0.08 0.26 16 2.75 0 24 6.93 Yes 62 0.18 No 21 0.91 Yes -23 0.94 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 52291948 - NM_001101662 NRDC 1 0.18 0.63 27 7.26 92.03 21 5.92 Yes 8 0.36 No 0 0 No -26 0.91 Yes 44 94.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 52293559 - NM_001101662 NRDC 1 0.04 0.17 9 -4.6 54.51 30 5.22 No 65 0.85 Yes 26 0.18 Yes -29 0.69 Yes 62 10.49 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 52299730 - NM_001101662 NRDC 1 0.97 2.25 60 7.29 79.43 24 6.98 Yes 56 0.77 No 0 0 No -23 0.85 Yes 47 90.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 52321061 - NM_001101662 NRDC 1 0.79 2.36 58 9.41 84.54 56 9.29 Yes 43 0.36 No 0 0 No -25 0.61 No 45 80.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 52321538 - NM_001101662 NRDC 1 0.3 0.9 38 6.33 92.41 24 4.59 No 56 0.79 Yes 0 0 No -23 0.35 No 44 36.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 90758423 - NM_017970 NRDE2 1 0.48 0.14 9 6.6 74.46 28 8.15 Yes 33 0.54 No 0 0 No -27 0.49 No 43 64.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 90763476 - NM_017970 NRDE2 1 0.35 0.11 7 3.01 0 47 6.57 Yes 39 0.52 No 0 0 No -37 0.51 No 33 79.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 90768148 - NM_017970 NRDE2 1 2.96 0.69 33 5.17 87.29 28 4.2 No 0 0.55 No 27 0.78 Yes -27 0.88 Yes 43 90.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 90784165 - NM_017970 NRDE2 1 2.75 0.88 40 10.01 90.91 37 8.2 Yes 24 1.91 Yes 36 0.86 Yes -36 0.89 Yes 34 91.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 111091624 - NM_001142476 NREP 1 0.59 0.39 24 5.87 82.46 35 5.78 Yes 5 1.03 Yes 22 0.56 Yes -34 0.56 No 36 73.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 129324539 + NM_001040110 NRF1 1 0.33 0.1 7 7.32 81.76 61 5.6 Yes 2 0.57 No 0 0 No -24 0.83 Yes 46 79.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 129349594 + NM_001040110 NRF1 1 0.18 0.11 7 3.01 0 69 6.92 Yes 74 1.54 Yes 0 0 No -51 0.91 Yes 19 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 129374882 + NM_001040110 NRF1 1 3.52 0.82 43 7.66 88.63 23 4.17 No 31 0.37 No 0 0 No -22 0.84 Yes 48 89.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 129384012 + NM_001040110 NRF1 1 2.95 0.85 38 4.92 86.97 22 5.1 No 9 0.76 No 21 0.85 Yes -21 0.78 Yes 49 85.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 196385588 + NM_198565 NRROS 1 0.42 0.31 17 0.09 74.68 47 6.93 Yes 4 0.41 No 0 0 No -47 0.57 No 16 59.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 330259 + NM_001323685 NRSN2 1 4.83 1 44 6.52 79.79 18 5.91 Yes 5 1.79 Yes 24 0.87 Yes -28 0.58 No 42 60.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 330316 + NM_001323685 NRSN2 1 1.55 0.31 14 7.89 81.35 27 5.2 No 62 1.74 Yes 0 0 No -20 0.65 No 50 69.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 333858 + NM_001323685 NRSN2 1 0.67 0.19 12 1.2 0 37 7.71 Yes 24 2.44 Yes 0 0 No -36 0.69 Yes 34 77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 301429 - NR_109990 NRSN2-AS1 1 7.03 1.1 47 -3.27 75.83 25 7.66 Yes -2 -1.31 No 27 0.9 Yes -24 0.89 Yes 46 91.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 303398 - NR_109990 NRSN2-AS1 1 3.52 0.26 13 5.79 80.97 19 7.94 Yes 0 1.05 Yes 0 0 No -18 0.38 No 52 36.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176563873 + NM_172349 NSD1 1 9.6 13.06 72 5.64 81.34 32 5.64 Yes 23 1.25 Yes 31 0.79 Yes -31 0.84 Yes 39 83.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176577155 + NM_172349 NSD1 1 0.45 0.6 35 1.52 83 53 7.93 Yes 40 1.82 Yes 0 0 No -29 0.77 Yes 41 68.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 176596315 + NM_172349 NSD1 1 0.09 0.13 8 5.98 81.66 21 5.24 No 8 0.84 Yes 0 0 No -20 0.45 No 50 43.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176596394 + NM_172349 NSD1 1 2.27 3 64 1.68 61.72 51 6.3 Yes 34 0.9 Yes 0 0 No -50 0.9 Yes 20 96.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176608451 + NM_172349 NSD1 1 0.16 0.24 13 10.73 98.73 43 7.36 Yes 27 0.29 No 0 0 No -42 0.81 Yes 28 82.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 176614126 + NM_172349 NSD1 1 2.57 3.43 68 4.04 82.57 28 7.42 Yes 20 1.71 Yes 0 0 No -28 0.69 Yes 42 87.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176620160 + NM_172349 NSD1 1 0.09 0.13 8 8.84 87.07 35 5.53 No 22 1 Yes 0 0 No -27 0.54 No 47 63.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176620796 + NM_172349 NSD1 1 0.08 0.1 7 1.83 83.78 35 6.44 Yes 22 0.93 Yes 0 0 No -34 0.68 Yes 36 84.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176625211 + NM_172349 NSD1 1 0.18 0.22 14 6.11 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.68 Yes 51 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176626622 + NM_172349 NSD1 1 0.31 0.42 21 4.18 83.78 46 8.12 Yes 33 1.18 Yes 0 0 No -51 0.6 No 24 67.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176627761 + NM_172349 NSD1 1 0.2 0.25 15 7.44 85.31 34 7.21 Yes 21 1.35 Yes 0 0 No -33 0.75 Yes 37 77.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176628582 + NM_172349 NSD1 1 0.26 0.33 22 4.64 84.41 29 8.25 Yes 16 1.64 Yes 0 0 No -28 0.78 Yes 42 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 176633958 + NM_172349 NSD1 1 0.27 0.33 19 6 83.86 23 6.16 Yes 10 1.69 Yes 0 0 No -22 0.53 No 42 66.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176652168 + NM_172349 NSD1 1 0.15 0.18 11 1.75 82.37 27 7.07 Yes 14 1.48 Yes 0 0 No -26 0.79 Yes 44 73.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176656765 + NM_172349 NSD1 1 0.2 0.26 14 3.94 87.36 24 6.4 Yes 62 -2.49 No 23 0.56 Yes -23 0.79 Yes 39 70.74 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176674924 + NM_172349 NSD1 1 8.86 7.25 72 8.12 79.22 28 4.79 No 15 0.1 No 0 0 No -22 0.87 Yes 48 92.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 176680980 + NM_172349 NSD1 1 3.07 2.71 67 11.63 95.1 61 8.6 Yes 48 1 Yes 0 0 No -41 0.78 Yes 29 75.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176685873 + NM_172349 NSD1 1 0.12 0.14 9 8.06 86.83 42 6.93 Yes 51 -1.66 No 0 0 No -38 0.68 Yes 32 78.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 176688078 + NM_172349 NSD1 1 0.28 0.33 15 4.99 83.14 26 6.08 Yes 44 -2.82 No 0 0 No -24 0.37 No 46 58.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 176688265 + NM_172349 NSD1 1 0.31 0.35 18 10.07 88.27 30 7.81 Yes 17 1.85 Yes 0 0 No -29 0.86 Yes 41 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176689307 + NM_172349 NSD1 1 0.63 0.67 32 8.57 79.58 40 5.97 Yes 75 0.84 Yes 0 0 No -31 0.49 No 42 60.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176702947 + NM_172349 NSD1 1 0.26 0.32 21 3.16 0 33 6.24 Yes 20 0.09 No 0 0 No -32 0.71 Yes 38 89.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 176710769 + NM_172349 NSD1 1 0.24 0.29 17 -3.29 0 19 4.58 No -4 0.86 Yes 26 0.89 Yes -18 0.93 Yes 52 85.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176718924 + NM_172349 NSD1 1 0.15 0.19 10 5.68 80.62 13 4.4 No 0 1.54 Yes 23 0.94 Yes -22 0.45 No 46 63.44 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 1893892 + NM_001042424 NSD2 1 6.05 5.33 72 7.33 82.5 45 5.46 No 32 1.28 Yes 33 0.65 Yes -33 0.61 No 37 69.48 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 1895456 + NM_001042424 NSD2 1 0.89 0.85 37 10.04 93.99 21 5.66 Yes 62 1.29 Yes 20 0.74 Yes -20 0.5 No 50 79.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 1900947 + NM_001042424 NSD2 1 0.54 0.46 26 10.52 83.77 35 6.59 Yes 53 0.33 No 31 0.74 Yes -32 0.78 Yes 36 81.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1904136 + NM_001042424 NSD2 1 0.25 0.72 34 8.54 91.22 19 5.47 No 69 0.92 Yes 0 0 No -29 0.72 Yes 41 60.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 1913817 + NM_001042424 NSD2 1 3.65 10.78 72 6.06 79 20 4.57 No 72 0.23 No 31 0.65 Yes -31 0.63 No 39 76.41 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 1930193 + NM_001042424 NSD2 1 0.45 0.82 36 9.43 87.44 24 5.48 No 21 1.42 Yes 0 0 No -23 0.81 Yes 47 80.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1939291 + NM_001042424 NSD2 1 0.39 0.75 38 10.71 91.9 21 5.42 No 58 1.13 Yes 0 0 No -20 0.69 Yes 50 78.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1939806 + NM_001042424 NSD2 1 0.29 0.51 26 5.97 79.49 49 6.19 Yes 14 1.38 Yes 0 0 No -26 0.92 Yes 44 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1939909 + NM_001042424 NSD2 1 0.19 0.36 21 10.66 80.45 49 6.58 Yes 69 -3.18 No 0 0 No -43 0.39 No 27 55.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 1940179 + NM_001042424 NSD2 1 0.13 0.28 18 -12.95 65.09 119 11.05 Yes -1 -2.09 No 0 0 No -57 0.06 No 16 11.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 1943061 + NM_001042424 NSD2 1 0.42 0.72 37 4.77 84.19 30 5.44 No 56 0.44 No 0 0 No -29 0.93 Yes 41 97.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 1944065 + NM_001042424 NSD2 1 7.64 12.76 72 3.2 75.54 43 5.44 No 50 1.51 Yes 26 0.9 Yes -26 0.84 Yes 44 89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1953370 + NM_001042424 NSD2 1 0.1 0.21 14 9.98 83.46 24 5.2 No 68 -4.73 No 0 0 No -20 0.45 No 47 37.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 1953725 + NM_001042424 NSD2 1 0.12 0.24 12 2.18 67.92 20 5.19 No 57 1.15 Yes 24 0.42 Yes -28 0.71 Yes 42 87.63 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1954478 + NM_001042424 NSD2 1 0.92 1.15 43 6.46 83.94 36 6.48 Yes 72 0.61 No 35 0.46 Yes -35 0.86 Yes 35 90.92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1954831 + NM_001042424 NSD2 1 0.3 0.39 25 8.61 90.48 20 5.1 No 7 0.24 No 20 0.36 Yes -19 0.61 No 50 55.4 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 1956263 + NM_001042424 NSD2 1 1.48 1.71 53 8.34 87.15 22 7.14 Yes 9 1.28 Yes 21 0.9 Yes -21 0.91 Yes 49 93.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 1956978 + NM_001042424 NSD2 1 0.16 0.18 10 4.32 76.12 15 4.9 No 71 0.73 No 0 0 No -18 0.86 Yes 52 91.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 1957813 + NM_001042424 NSD2 1 2.12 2.54 64 4.3 75.43 40 6.24 Yes 42 -1.53 No 0 0 No -32 0.71 Yes 38 84.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 1961344 + NM_001042424 NSD2 1 1.39 1.81 55 6.05 0 22 4.58 No 9 0.18 No 0 0 No -21 0.85 Yes 49 92.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 38142859 - NM_023034 NSD3 1 0.4 0.1 7 13.04 90.96 22 5.29 No 9 0.44 No 0 0 No -27 0.58 No 43 73.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 38153498 - NM_023034 NSD3 1 5.96 2.01 56 9.56 86.24 44 7.22 Yes 31 1.6 Yes 25 0.76 Yes -43 0.79 Yes 27 82.85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 38158441 - NM_023034 NSD3 1 0.38 0.14 9 7.14 82.59 27 5.19 No 74 0.44 No 0 0 No -26 0.71 Yes 44 79.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 38160461 - NM_023034 NSD3 1 0.56 0.19 13 3.13 73.16 52 5.79 Yes 39 0.82 Yes 0 0 No -55 0.35 No 15 65.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 38160917 - NM_023034 NSD3 1 0.48 0.15 9 7.69 89.08 9 5.45 No 35 1.19 Yes 0 0 No -22 0.62 No 48 73.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 38173059 - NM_023034 NSD3 1 0.8 0.32 17 1.05 0 61 6.12 Yes 70 0.2 No 0 0 No -28 0.88 Yes 42 82.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 38175557 - NM_023034 NSD3 1 165.65 60.76 72 9.95 83.58 29 6.48 Yes 16 1.08 Yes 28 0.93 Yes -28 0.92 Yes 42 90.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 38179626 - NM_023034 NSD3 1 0.17 0.17 10 9.69 82.74 15 5.28 No -3 0.87 Yes 0 0 No -21 0.46 No 45 60.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 38193035 - NM_023034 NSD3 1 0.12 0.14 8 5.97 75.04 24 5.98 Yes 2 0.57 No 0 0 No -28 0.64 No 42 81.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 38196124 - NM_023034 NSD3 1 0.2 0.24 14 -3.55 79.94 69 7.94 Yes 10 1.28 Yes 0 0 No -22 0.64 No 29 42.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 38205662 - NM_023034 NSD3 1 0.22 0.19 10 6.1 81.69 29 6.4 Yes 70 -4.47 No 0 0 No -24 0.46 No 46 62.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 38221419 - NM_023034 NSD3 1 0.21 0.17 11 11.25 87.25 32 4.3 No 75 0.92 Yes 25 0.8 Yes -25 0.83 Yes 45 84.35 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 152003138 + NM_001129765 NSDHL 1 2.01 0.28 15 10.21 96.53 30 5.46 No 58 1.15 Yes 0 0 No -29 0.87 Yes 41 80.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 152014830 + NM_001129765 NSDHL 1 0.93 0.13 7 -4.55 0 33 4.84 No 7 1.38 Yes 0 0 No -32 0.64 No 27 59.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 152001514 + NM_001129765 NSDHL 1 2.68 0.33 18 2.58 68.14 41 6.4 Yes 9 1.1 Yes 0 0 No -40 0.7 Yes 30 77.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 152003138 + NM_001129765 NSDHL 1 1.05 0.13 9 10.21 96.53 30 5.46 No 58 1.15 Yes 0 0 No -29 0.87 Yes 41 80.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 152033454 + NM_001129765 NSDHL 1 0.17 0.19 11 3.59 79.2 19 5 No 33 -1.91 No 0 0 No -21 0.56 No 49 39.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 1426795 - NM_001206736 NSFL1C 1 0.23 0.51 23 10.98 79.71 22 5.76 Yes 40 2.09 Yes 24 0.85 Yes -24 0.35 No 46 58.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 1441649 - NM_001206736 NSFL1C 1 0.07 0.14 9 3.77 82.49 24 4.62 No 55 1.12 Yes 0 0 No -19 0.7 Yes 51 92.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 1444087 - NM_001206736 NSFL1C 1 0.42 0.76 35 6.38 80.61 45 6.77 Yes 32 2.34 Yes 32 0.94 Yes -32 0.96 Yes 38 92.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 59502118 - NM_001144772 NSMAF 1 0.72 0.78 36 6.23 83.39 27 5.03 No 26 1.39 Yes 0 0 No -26 0.47 No 44 61.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 59502606 - NM_001144772 NSMAF 1 0.35 0.33 20 6.97 94.76 24 5.86 Yes 39 1.17 Yes 0 0 No -23 0.65 No 47 69.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 59506853 - NM_001144772 NSMAF 1 0.17 0.18 11 -0.19 78.98 24 5.57 Yes 4 0.48 No 23 0.7 Yes -24 0.63 No 47 84.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 59510483 - NM_001144772 NSMAF 1 0.12 0.15 9 3.67 71.64 22 4.9 No 36 -4.1 No 26 0.79 Yes -25 0.6 No 45 72.1 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 59511936 - NM_001144772 NSMAF 1 0.28 0.26 17 -7.43 74.76 26 5.56 Yes 2 0.48 No 19 0.62 Yes -24 0.45 No 53 37.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 59516040 - NM_001144772 NSMAF 1 0.11 0.1 7 2.98 73.93 41 6.41 Yes 53 0.58 No 0 0 No -37 0.84 Yes 33 80.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 59536042 - NM_001144772 NSMAF 1 0.26 0.35 17 4.2 78.01 35 5.45 No 22 0.91 Yes 0 0 No -34 0.77 Yes 36 81.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 59549949 - NM_001144772 NSMAF 1 1.54 1.39 50 4.7 78.14 32 5.95 Yes 7 1.25 Yes 19 0.73 Yes -31 0.68 Yes 39 88.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 59550913 - NM_001144772 NSMAF 1 0.44 0.38 22 7.08 81.85 26 5.36 No 18 0.6 No 0 0 No -25 0.69 Yes 45 81.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 59552662 - NM_001144772 NSMAF 1 0.25 0.24 14 6.49 79.9 21 5.91 Yes 41 -3.9 No 24 0.55 Yes -21 0.53 No 49 46.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 27236555 - NM_145080 NSMCE1 1 0.12 0.24 15 1.22 69.18 35 7.35 Yes 22 1.48 Yes 0 0 No -34 0.97 Yes 36 93.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27238155 - NM_145080 NSMCE1 1 2 3.31 66 1.17 73.33 34 6.32 Yes 21 0.34 No 30 0.8 Yes -33 0.84 Yes 37 77.25 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 27242956 - NM_145080 NSMCE1 1 0.47 0.82 38 9.34 85.05 21 5.07 No 45 1.89 Yes 0 0 No -26 0.88 Yes 44 95.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 27253211 - NM_145080 NSMCE1 1 1.17 1.58 54 10.19 80.86 30 6 Yes 43 0.96 Yes 29 0.51 Yes -27 0.71 Yes 43 68.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 126106709 + NM_173685 NSMCE2 1 0.74 0.47 26 7.5 88.45 19 5.16 No 13 0.94 Yes 25 0.86 Yes -25 0.79 Yes 45 83.28 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 126108923 + NM_173685 NSMCE2 1 0.93 0.54 28 3.05 85.48 26 5.1 No 72 -0.59 No 0 0 No -25 0.93 Yes 45 74.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 126111695 + NM_173685 NSMCE2 1 2.2 1.28 46 2.3 71.19 30 5.66 Yes 49 -4.14 No 0 0 No -29 0.89 Yes 41 82.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 126114255 + NM_173685 NSMCE2 1 30.4 17.99 72 8.74 88.32 18 6.31 Yes 5 2.24 Yes 27 0.46 Yes -35 0.37 No 43 47.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 126116252 + NM_173685 NSMCE2 1 0.3 0.29 17 10.47 93.82 40 6.78 Yes 59 1.02 Yes 0 0 No -30 0.7 Yes 31 75.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 126139207 + NM_173685 NSMCE2 1 0.24 0.25 17 9.04 93.4 38 5.53 No 8 0.24 No 23 0.85 Yes -23 0.94 Yes 47 94.3 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 126168241 + NM_173685 NSMCE2 1 6.42 5.67 72 4.64 81.66 25 5.22 No 62 -4.19 No 24 0.72 Yes -24 0.59 No 46 62.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 126207296 + NM_173685 NSMCE2 1 1.49 1.49 51 7.67 74.03 18 4.19 No 53 -3.78 No 0 0 No -21 0.9 Yes 49 92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 126244252 + NM_173685 NSMCE2 1 0.2 0.18 13 5.04 72.88 38 7.19 Yes 16 1.51 Yes 0 0 No -28 0.63 No 33 52.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 126306611 + NM_173685 NSMCE2 1 0.59 0.61 31 10.42 89.53 23 7.25 Yes 10 1.76 Yes 0 0 No -22 0.81 Yes 48 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 126322904 + NM_173685 NSMCE2 1 0.12 0.1 7 7 82.61 18 5.44 No 5 1.55 Yes 0 0 No -32 0.88 Yes 38 95.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 126374298 + NM_173685 NSMCE2 1 0.47 0.47 23 8.13 77.75 27 5.98 Yes 14 1.12 Yes 0 0 No -26 0.76 Yes 37 78.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123718923 - NM_017615 NSMCE4A 1 3.65 5.03 71 -8.96 72.77 26 6.15 Yes 47 2.02 Yes 0 0 No -25 0.81 Yes 45 70.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123719734 - NM_017615 NSMCE4A 1 0.13 0.18 12 3.33 70.46 38 7.06 Yes 25 0.28 No 0 0 No -37 0.63 No 33 81.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 123720973 - NM_017615 NSMCE4A 1 1.47 3.22 65 8.02 84.85 25 4.88 No 12 1.07 Yes 0 0 No -24 0.76 Yes 46 82.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123721454 - NM_017615 NSMCE4A 1 0.18 0.36 20 7.08 81.99 22 7.42 Yes 9 1.35 Yes 0 0 No -21 0.86 Yes 49 86.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123721623 - NM_017615 NSMCE4A 1 1.14 2.36 57 12.2 92.63 29 5.54 No 43 -1.23 No 29 0.44 Yes -21 0.56 No 49 70.87 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 123725795 - NM_017615 NSMCE4A 1 0.07 0.14 9 8.43 94.14 20 5 No 7 0.8 Yes 0 0 No -27 0.45 No 43 51.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 123730531 - NM_017615 NSMCE4A 1 0.13 0.21 14 9.65 89.11 22 6.48 Yes 72 1.03 Yes 27 0.35 Yes -27 0.56 No 43 67.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 123733115 - NM_017615 NSMCE4A 1 0.49 0.68 40 8.46 85.59 46 5.53 No 33 1.56 Yes 0 0 No -45 0.89 Yes 25 77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 123733616 - NM_017615 NSMCE4A 1 0.3 0.31 19 0.95 67.34 17 4.88 No 34 0.79 Yes 23 0.72 Yes -30 0.75 Yes 40 66.08 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 140343936 - NM_001130971 NSMF 1 2.19 2.38 65 -6.47 0 11 4.12 No 21 1.3 Yes 0 0 No -33 0.85 Yes 37 82.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140343939 - NM_001130971 NSMF 1 0.79 0.88 37 -4.61 0 31 6.08 Yes 18 1.31 Yes 0 0 No -30 0.86 Yes 40 82.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140344089 - NM_001130971 NSMF 1 0.1 0.11 7 6.83 80.21 15 4.9 No 47 1.18 Yes 0 0 No -23 0.76 Yes 47 65.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 140347629 - NM_001130971 NSMF 1 0.29 0.22 15 3.1 0 22 7.48 Yes 9 1.89 Yes 24 0.1 Yes -21 0.71 Yes 49 85.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140347632 - NM_001130971 NSMF 1 0.12 0.1 7 -3.06 0 19 7.28 Yes 6 1.91 Yes 24 0.1 Yes -18 0.49 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 140349516 - NM_001130971 NSMF 1 2.58 0.26 16 -7.38 0 24 5.92 Yes NA NA NA 0 0 No -7 0.44 No 59 25.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 140349751 - NM_001130971 NSMF 1 1.57 0.11 7 -2.13 0 12 4.24 No 16 0.06 No 0 0 No -28 0.8 Yes 42 87.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140349760 - NM_001130971 NSMF 1 610.46 56.85 72 4.91 82.21 20 5.74 Yes 7 0.66 No 19 0.9 Yes -19 0.83 Yes 51 90.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 140349784 - NM_001130971 NSMF 1 3.28 0.33 20 -0.68 0 36 8.96 Yes NA NA NA 19 0.9 Yes -35 0.62 No 35 72.96 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 140350087 - NM_001130971 NSMF 1 4.38 0.39 24 5.98 73 46 7.5 Yes 16 1.81 Yes 28 0.93 Yes -45 0.65 No 42 76.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 140352997 - NM_001130971 NSMF 1 1.9 0.6 26 0.59 0 30 7.55 Yes 17 2.26 Yes 0 0 No -29 0.93 Yes 41 92.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 28504847 + NM_001261467 NSRP1 1 0.29 0.25 13 11.54 86.23 20 4.37 No 74 0.25 No 0 0 No -23 0.41 No 51 49.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 6605489 - NM_001193455 NSUN2 1 0.4 1.67 29 6.25 79.58 26 5.61 Yes 59 -2.08 No 0 0 No -25 0.88 Yes 45 80.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 6607492 - NM_001193455 NSUN2 1 0.1 0.43 23 -0.97 0 11 3.46 No 58 0.89 Yes 0 0 No -29 0.68 Yes 41 74.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 6616992 - NM_001193455 NSUN2 1 0.07 0.21 12 5.07 84.6 36 7.03 Yes 74 0.34 No 23 0.46 Yes -22 0.61 No 48 68.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 6619581 - NM_001193455 NSUN2 1 0.88 2.51 65 11.12 82.68 28 5.74 Yes 48 0.73 No 0 0 No -27 0.82 Yes 43 83.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 6621858 - NM_001193455 NSUN2 1 0.15 0.4 21 4.3 84.41 35 7.92 Yes 67 0.43 No 28 0.55 Yes -22 0.58 No 48 54.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 6621858 - NM_001193455 NSUN2 1 0.32 0.96 40 4.3 84.41 35 7.92 Yes 67 0.43 No 28 0.55 Yes -22 0.58 No 48 54.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 6622233 - NM_001193455 NSUN2 1 0.17 0.68 34 0.84 52.98 38 6.21 Yes 69 -2.87 No 25 0.61 Yes -37 0.77 Yes 33 78.67 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 6632091 - NM_001193455 NSUN2 1 753.14 188.47 72 7.31 82.82 23 5.76 Yes 33 1.22 Yes 22 0.71 Yes -21 0.46 No 42 61.41 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 93800452 + NM_022072 NSUN3 1 2.16 0.85 36 12.02 92.35 95 10.3 Yes 16 1.34 Yes 28 0.73 Yes -28 0.77 Yes 42 74.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 93800893 + NM_022072 NSUN3 1 1.22 0.46 31 7.64 78.43 27 5.17 No 14 0.89 Yes 0 0 No -26 0.86 Yes 44 95.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 93803198 + NM_022072 NSUN3 1 3.56 1.43 55 8.35 87.74 23 8.21 Yes 10 1.12 Yes 22 0.88 Yes -22 0.7 Yes 48 52.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 93803891 + NM_022072 NSUN3 1 1.96 0.75 37 12.51 99.37 35 5.77 Yes 22 0.68 No 0 0 No -22 0.36 No 48 62.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 93818921 + NM_022072 NSUN3 1 0.78 0.28 16 3.61 77.38 30 5.56 Yes 49 0.59 No 0 0 No -29 0.8 Yes 41 69.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 93825837 + NM_022072 NSUN3 1 0.7 0.25 12 5.54 0 27 6.29 Yes 14 0.57 No 0 0 No -34 0.42 No 39 59.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46823247 + NM_001256127 NSUN4 1 0.71 0.46 22 8.06 84.44 29 5.57 Yes 16 0.01 No 0 0 No -26 0.61 No 44 82.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 72717912 - NM_001168348 NSUN5 1 1.06 1.26 42 12.1 85.71 19 6.63 Yes 6 1.8 Yes 0 0 No -18 0.56 No 52 66.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72718402 - NM_001168348 NSUN5 1 3.31 3.07 66 -0.72 0 23 5.8 Yes 10 1.62 Yes 23 0.93 Yes -27 0.71 Yes 43 81.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 72718454 - NM_001168348 NSUN5 1 0.2 0.21 12 3.92 79.28 29 7.85 Yes 74 -1.89 No 0 0 No -29 0.56 No 41 73.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 72718855 - NM_001168348 NSUN5 1 0.09 0.15 9 0.86 0 33 7.55 Yes 20 0.64 No 0 0 No -32 0.91 Yes 38 94.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 72720712 - NM_001168348 NSUN5 1 0.11 0.19 11 4.14 92.4 17 5.29 No 4 0.98 Yes 0 0 No -21 0.43 No 49 59.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72720865 - NM_001168348 NSUN5 1 0.26 0.49 27 11.49 87.64 32 6.13 Yes 19 1.49 Yes 0 0 No -31 0.85 Yes 39 94.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75043917 + NR_033322 NSUN5P1 1 6.53 0.83 40 6.41 88.04 19 5.28 No 63 1.42 Yes 29 0.89 Yes -29 0.92 Yes 41 92.51 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 75044402 + NR_033322 NSUN5P1 1 0.45 0.18 10 0.86 0 33 7.55 Yes 20 0.66 No 0 0 No -32 0.9 Yes 38 93.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 75044873 + NR_033322 NSUN5P1 1 17.37 2.93 66 -0.42 0 30 6.38 Yes 17 1.74 Yes 0 0 No -29 0.91 Yes 41 75.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75045380 + NR_033322 NSUN5P1 1 1.33 0.1 7 12.1 85.71 19 6.63 Yes 6 1.8 Yes 18 0.75 Yes -18 0.56 No 52 66.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 72419520 - NR_033323 NSUN5P2 1 0.83 0.1 7 12.1 85.71 19 6.63 Yes 6 1.8 Yes 18 0.75 Yes -18 0.56 No 52 66.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 72419772 - NR_033323 NSUN5P2 1 3.99 0.47 24 7.71 77.79 18 5.29 No 5 0.34 No 0 0 No -29 0.74 Yes 41 76.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 72420496 - NR_033323 NSUN5P2 1 0.45 0.17 10 1.03 0 33 7.55 Yes 20 0.67 No 0 0 No -32 0.9 Yes 38 94.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 18837177 - NM_182543 NSUN6 1 0.91 0.28 18 5.52 76.72 77 7.42 Yes 30 0.39 No 44 0.2 Yes -46 0.52 No 28 70.61 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 18870728 - NM_182543 NSUN6 1 0.59 0.32 17 5.38 77.58 14 5.18 No 1 1.33 Yes 0 0 No -25 0.66 No 45 63.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 18870751 - NM_182543 NSUN6 1 0.47 0.25 15 4.9 84.41 35 6.4 Yes 44 1.28 Yes 0 0 No -34 0.59 No 36 77.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 18877602 - NM_182543 NSUN6 1 3.27 1.83 54 9.33 92.4 20 4.9 No 7 1.54 Yes 0 0 No -19 0.78 Yes 51 92.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 18901181 - NM_182543 NSUN6 1 0.41 0.24 14 8.48 87 24 5.73 Yes 11 1.25 Yes 0 0 No -23 0.61 No 47 63.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 18902436 - NM_182543 NSUN6 1 0.21 0.13 7 11.7 89.53 25 6.46 Yes 36 1.18 Yes 0 0 No -24 0.88 Yes 46 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 18911667 - NM_182543 NSUN6 1 0.59 0.24 15 8.91 89.29 26 5.64 Yes 61 -2.95 No 0 0 No -23 0.68 Yes 47 50.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 18915695 - NM_182543 NSUN6 1 0.23 0.1 7 10.32 88.94 40 5.05 No 27 0.81 Yes 0 0 No -29 0.53 No 41 62.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 18931482 - NM_182543 NSUN6 1 7.65 3.74 70 3.73 77.03 24 6.55 Yes 8 0.41 No 0 0 No -26 0.63 No 44 72.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 18932570 - NM_182543 NSUN6 1 2.78 1.39 50 7.46 88 25 5.12 No 12 0.11 No 0 0 No -24 0.91 Yes 46 82.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73126733 - NR_045513 NT5C 1 2.48 3.35 67 1.97 0 16 6.08 Yes 27 0.26 No 25 0.76 Yes -30 0.88 Yes 40 88.62 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73126768 - NR_045513 NT5C 1 0.37 0.44 21 1.98 70.66 17 4.89 No 18 -3.07 No 25 0.76 Yes -16 0.42 No 54 46.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 104850396 - NM_012229 NT5C2 1 0.42 0.38 19 8.22 88.34 27 5.88 Yes 34 1.62 Yes 0 0 No -26 0.85 Yes 44 89.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104857846 - NM_012229 NT5C2 1 0.28 0.31 19 11.74 93.3 25 6 Yes 12 0.7 No 24 0.77 Yes -24 0.75 Yes 46 82.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 104860594 - NM_012229 NT5C2 1 0.48 0.46 28 6.94 82.56 30 6.63 Yes 17 1.12 Yes 0 0 No -29 0.88 Yes 41 92.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104860701 - NM_012229 NT5C2 1 6.44 6.54 71 5.78 76.62 29 5.48 No 55 0.35 No 23 0.51 Yes -23 0.75 Yes 47 78.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 104860722 - NM_012229 NT5C2 1 1.12 1.14 52 1.2 74.31 20 4.9 No 34 0.33 No 23 0.51 Yes -19 0.45 No 51 24.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 104865139 - NM_012229 NT5C2 1 25.88 30.01 72 9.07 88.07 30 5.97 Yes 17 0.95 Yes 29 0.87 Yes -29 0.81 Yes 41 87.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 104871563 - NM_012229 NT5C2 1 5.77 7.42 72 10.78 97.52 57 7.57 Yes 44 0.7 No 0 0 No -56 0.4 No 19 64.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104871563 - NM_012229 NT5C2 1 0.41 0.53 27 10.78 97.52 57 7.57 Yes 44 0.7 No 0 0 No -56 0.4 No 19 64.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104896130 - NM_012229 NT5C2 1 0.74 0.96 42 7 88.27 25 5.65 Yes 12 0.88 Yes 0 0 No -24 0.93 Yes 46 91.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104897064 - NM_012229 NT5C2 1 0.07 0.11 8 5.9 78.12 23 5.96 Yes 31 1.62 Yes 0 0 No -30 0.49 No 40 58.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 104902926 - NM_012229 NT5C2 1 1.79 1.78 54 8.05 86.44 27 6.55 Yes 14 1.29 Yes 0 0 No -26 0.76 Yes 44 76.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104917826 - NM_012229 NT5C2 1 0.32 0.33 18 6 83.86 38 8.54 Yes 71 0.59 No 0 0 No -37 0.34 No 33 51.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104929207 - NM_012229 NT5C2 1 0.58 0.54 27 7.43 86.73 22 7.28 Yes 9 1.4 Yes 21 0.79 Yes -21 0.85 Yes 49 90.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 104931210 - NM_012229 NT5C2 1 0.16 0.17 10 4.88 89.88 27 4.02 No 7 0.35 No 0 0 No -23 0.7 Yes 44 62.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104934339 - NM_012229 NT5C2 1 0.58 0.56 30 -0.35 87.36 32 5.89 Yes 16 0.37 No 0 0 No -31 0.76 Yes 39 92.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 104947004 - NM_012229 NT5C2 1 0.84 0.29 13 10.58 88 35 5.82 Yes 74 1.68 Yes 0 0 No -25 0.92 Yes 45 90.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 33061709 - NM_001002010 NT5C3A 1 0.04 0.13 8 -15.53 0 49 5.17 No 17 1.26 Yes 0 0 No -29 0.62 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 33063718 - NM_001002010 NT5C3A 1 0.09 0.44 23 -15.84 0 28 8.02 Yes 15 1.39 Yes 0 0 No -31 0.36 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 33075598 - NM_001002010 NT5C3A 1 3.42 1.19 50 -6.18 51.12 56 8.02 Yes 43 0.66 No 0 0 No -55 0.82 Yes 15 90.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 33075601 - NM_001002010 NT5C3A 1 48.14 16.92 72 -1.97 63.76 53 7.88 Yes 40 0.66 No 0 0 No -52 0.84 Yes 18 88.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 39984883 - NR_033464 NT5C3B 1 0.13 0.17 10 3.02 89.31 21 4.46 No 66 0.98 Yes 0 0 No -20 0.81 Yes 50 67.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 116422572 + NM_152729 NT5DC1 1 0.11 0.19 9 3.68 77.55 41 7.1 Yes 28 0.78 Yes 0 0 No -40 0.94 Yes 30 95.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 116431490 + NM_152729 NT5DC1 1 0.09 0.47 24 6.92 78.23 52 8.92 Yes 39 0.88 Yes 0 0 No -33 0.51 No 37 66.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 116431540 + NM_152729 NT5DC1 1 0.13 0.63 28 9.68 87.95 16 5.65 Yes 3 1.11 Yes 0 0 No -19 0.62 No 55 48.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 116439008 + NM_152729 NT5DC1 1 0.11 0.33 20 0.41 0 24 7.3 Yes 11 0.85 Yes 20 0.64 Yes -23 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 116550426 + NM_152729 NT5DC1 1 0.15 0.64 32 10.53 95.29 23 5.19 No 51 1.86 Yes 0 0 No -22 0.52 No 47 66.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 116558558 + NM_152729 NT5DC1 1 0.19 0.85 40 5.35 90.63 23 4.74 No 75 -3.7 No 0 0 No -23 0.85 Yes 47 90.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 116558602 + NM_152729 NT5DC1 1 0.04 0.19 12 5.23 81.84 29 4.86 No 25 -2.41 No 23 0.98 Yes -28 0.74 Yes 42 73.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 116558621 + NM_152729 NT5DC1 1 0.43 2.08 59 0.38 77.22 24 5 No 11 1.27 Yes 23 0.98 Yes -23 0.94 Yes 47 94.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 116560181 + NM_152729 NT5DC1 1 0.11 0.32 18 7.76 86.59 31 7.64 Yes 75 0.4 No 0 0 No -30 0.81 Yes 35 68.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 116560489 + NM_152729 NT5DC1 1 0.11 0.46 25 5.27 82.18 19 5.43 No 6 0.52 No 0 0 No -26 0.69 Yes 44 72.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 116560493 + NM_152729 NT5DC1 1 0.13 0.6 28 -0.78 0 23 5.78 Yes 10 0.53 No 0 0 No -22 0.7 Yes 48 73.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 116562392 + NM_152729 NT5DC1 1 0.06 0.22 15 -11.25 0 13 4.24 No 55 0.05 No 0 0 No -12 0.5 No 58 21.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 116562407 + NM_152729 NT5DC1 1 0.66 2.79 65 6.19 97.1 19 4.9 No 15 0.29 No 0 0 No -27 0.74 Yes 43 35.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52558628 - NM_022908 NT5DC2 1 3.71 4.69 70 3.73 76.63 23 7.11 Yes 10 1.54 Yes 22 0.94 Yes -22 0.88 Yes 48 80.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52558628 - NM_022908 NT5DC2 1 2.93 3.54 64 3.73 76.63 23 7.11 Yes 10 1.54 Yes 22 0.94 Yes -22 0.88 Yes 48 80.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52558889 - NM_022908 NT5DC2 1 0.48 0.58 27 1.45 0 12 4.24 No NA NA NA 0 0 No -31 0.45 No 40 58.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52562800 - NM_022908 NT5DC2 1 0.07 0.15 10 8.07 82.38 23 7.49 Yes 7 0.79 Yes 24 0.83 Yes -22 0.71 Yes 48 79.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 104179526 - NM_001031701 NT5DC3 1 4.9 1.33 47 12.04 95.65 40 7.86 Yes 27 3.11 Yes 34 0.83 Yes -34 0.65 No 36 83.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 104181032 - NM_001031701 NT5DC3 1 0.45 0.14 9 11.25 94.37 25 6.84 Yes 12 1.16 Yes 0 0 No -24 0.58 No 46 69.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 104186097 - NM_001031701 NT5DC3 1 1.13 0.29 18 5.62 84.36 26 5.97 Yes 13 0.56 No 0 0 No -25 0.83 Yes 45 89.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 15133947 - NM_173474 NTAN1 1 0.16 0.26 14 6.26 88.25 34 4.36 No 69 1.11 Yes 25 0.92 Yes -30 0.4 No 38 57.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 15134007 - NM_173474 NTAN1 1 0.07 0.1 7 10.27 87.05 22 6.4 Yes 9 1.16 Yes 0 0 No -21 0.77 Yes 49 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2090243 - NM_002528 NTHL1 1 1.75 1.04 44 4.92 80.17 20 6.4 Yes 7 1.4 Yes 19 0.71 Yes -19 0.85 Yes 51 89.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2094761 - NM_002528 NTHL1 1 0.23 0.17 11 4.86 81.32 16 5.52 No -1 1.91 Yes 0 0 No -28 0.56 No 42 62.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 2094805 - NM_002528 NTHL1 1 2.59 1.82 57 -2.66 63.55 43 6.7 Yes 30 0.49 No 28 0.51 Yes -25 0.51 No 45 37.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 2096365 - NM_002528 NTHL1 1 3.42 1.36 47 -0.59 73.05 34 5.91 Yes 76 -1.29 No 0 0 No -24 0.36 No 46 49.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2096393 - NM_002528 NTHL1 1 0.77 0.33 20 5.54 76.64 54 5.57 Yes 74 -2.59 No 21 0.51 Yes -27 0.52 No 47 50.25 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 233112047 + NR_138027 NTPCR 1 1.56 1.94 56 7.96 81.91 24 7.66 Yes 54 0.79 Yes 26 0.63 Yes -23 0.53 No 47 80.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 233112087 + NR_138027 NTPCR 1 0.47 0.71 33 5.75 82.39 33 7 Yes 51 0.55 No 24 0.41 Yes -26 0.43 No 49 42.45 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 87324760 + NM_001291937 NTRK2 1 0.27 0.15 11 9.81 92.88 65 7.85 Yes 14 1.11 Yes 0 0 No -26 0.73 Yes 47 73.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 87417942 + NM_001291937 NTRK2 1 0.16 0.14 9 10.36 91.61 28 5.55 No 8 1.02 Yes 0 0 No -27 0.81 Yes 43 83.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151040673 + NM_016118 NUB1 1 0.17 0.1 7 -0.09 56.45 50 6.31 Yes 34 1.36 Yes 0 0 No -49 0.75 Yes 21 71.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151042760 + NM_016118 NUB1 1 0.06 0.11 7 8.52 89.9 28 5.31 No 48 1.27 Yes 0 0 No -27 0.95 Yes 43 97.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151047251 + NM_016118 NUB1 1 0.06 0.19 10 5.55 74.25 31 6.67 Yes 18 1.48 Yes 0 0 No -30 0.86 Yes 40 89.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151049178 + NM_016118 NUB1 1 0.42 1.06 47 7.83 82.91 34 6.7 Yes 21 1.28 Yes 24 0.92 Yes -33 0.6 No 37 72.32 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 151052838 + NM_016118 NUB1 1 1.17 2.32 60 -2.37 0 25 5.78 Yes 12 0.62 No 23 0.59 Yes -25 0.86 Yes 45 75.92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 151052868 + NM_016118 NUB1 1 0.06 0.15 10 -4.07 61.31 20 4.9 No 13 1.02 Yes 0 0 No -38 0.54 No 32 52.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 151053192 + NM_016118 NUB1 1 0.06 0.15 10 -13.39 0 18 4.19 No 39 1.61 Yes 27 0.89 Yes -17 0.62 No 36 46.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 151053216 + NM_016118 NUB1 1 3.13 7.07 70 1.64 85.54 31 5.74 Yes 63 1.61 Yes 0 0 No -30 0.94 Yes 40 97.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151054391 + NM_016118 NUB1 1 0.07 0.15 11 5.53 85.02 17 6.93 Yes 4 1.79 Yes 0 0 No -27 0.49 No 54 73.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 151066924 + NM_016118 NUB1 1 0.05 0.1 7 6.76 69.59 41 6.64 Yes 17 0.57 No 0 0 No -40 0.62 No 30 86.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 151071732 + NM_016118 NUB1 1 0.06 0.11 7 3.04 84.46 24 4.8 No 39 0.39 No 0 0 No -23 0.58 No 50 59.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 10841005 + NM_001323597 NUBP1 1 0.71 0.67 35 -2.2 0 10 2.83 No 14 1.51 Yes 0 0 No -34 0.54 No 36 67.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 1836738 + NM_001284501 NUBP2 1 0.5 0.38 24 4.3 71.73 33 4.84 No 67 0.57 No 25 0.62 Yes -25 0.55 No 45 39.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 1838161 + NM_001284501 NUBP2 1 0.34 0.68 34 5.18 0 15 4.58 No 26 1.49 Yes 25 0.53 Yes -17 0.65 No 53 49.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 32070643 + NR_120408 NUBPL 1 0.89 0.26 13 4.11 76.34 53 7.58 Yes 56 0.89 Yes 0 0 No -36 0.64 No 36 69.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 32075482 + NR_120408 NUBPL 1 0.6 0.19 13 6.94 85.67 19 7 Yes 67 1.31 Yes 0 0 No -18 0.46 No 52 76.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 32082678 + NR_120408 NUBPL 1 2.91 0.76 36 3.88 88.76 33 4.56 No 10 0.73 No 0 0 No -22 0.69 Yes 48 65.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 32089754 + NR_120408 NUBPL 1 0.8 0.24 14 5.8 86.83 24 4.9 No 46 1.32 Yes 0 0 No -23 0.69 Yes 47 67.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 32123275 + NR_120408 NUBPL 1 3.13 0.93 39 5.23 84.35 30 6.56 Yes 17 1.57 Yes 29 0.88 Yes -29 0.87 Yes 41 94.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 32311706 + NR_120408 NUBPL 1 0.77 0.17 9 10.06 78.69 34 4.9 No 47 0.63 No 0 0 No -27 0.5 No 37 67.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49404025 + NM_006184 NUCB1 1 0.05 0.11 8 0.94 78.04 14 5.2 No 76 -1.64 No 21 0.75 Yes -22 0.31 No 48 46.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 49407636 + NM_006184 NUCB1 1 0.08 0.21 14 5.24 79.96 36 5.91 Yes 23 -2.16 No 0 0 No -17 0.34 No 53 60.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49408679 + NM_006184 NUCB1 1 0.08 0.18 9 5.68 81.47 19 8.52 Yes 6 1.02 Yes 0 0 No -18 0.52 No 52 53.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 49425592 + NM_006184 NUCB1 1 0.27 0.36 22 2.05 79.69 16 5.06 No NA NA NA 0 0 No -42 0.37 No 44 58.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 17305007 + NM_001330227 NUCB2 1 0.29 0.19 10 10.72 93.18 24 6.36 Yes 11 0.42 No 23 0.46 Yes -26 0.52 No 44 79.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 17308180 + NM_001330227 NUCB2 1 11.16 6.61 71 9 86.22 22 4.79 No 9 0.22 No 21 0.92 Yes -21 0.96 Yes 49 96.28 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 17312786 + NM_001330227 NUCB2 1 5.13 2.96 61 8.48 87.3 32 5.91 Yes 19 0.48 No 31 0.81 Yes -31 0.79 Yes 39 68.08 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 17317567 + NM_001330227 NUCB2 1 0.22 0.21 14 3.24 74.06 27 5.45 No 3 0.84 Yes 0 0 No -26 0.51 No 47 48.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 205688802 - NM_022731 NUCKS1 1 15.39 94.36 72 4.5 80.08 24 4.71 No 11 0.62 No 0 0 No -23 0.64 No 41 51.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 205688804 - NM_022731 NUCKS1 1 0.03 0.15 9 -11.15 0 22 4.58 No 9 0.61 No 0 0 No -21 0.52 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 205689780 - NM_022731 NUCKS1 1 0.03 0.17 10 -2.97 69.81 72 7.87 Yes 59 0.87 Yes 0 0 No -34 0.47 No 36 44.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 205696928 - NM_022731 NUCKS1 1 0.01 0.11 7 -4.85 0 9 3.87 No 76 -5.91 No 0 0 No -31 0.8 Yes 39 60.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 205696953 - NM_022731 NUCKS1 1 0.02 0.15 11 -6.74 0 14 4.24 No 61 -5.3 No 25 0.88 Yes -26 0.73 Yes 64 25.22 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 205698749 - NM_022731 NUCKS1 1 0.05 0.32 22 -14.25 0 25 5.09 No 47 0.23 No 0 0 No -24 0.85 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 205710260 - NM_022731 NUCKS1 1 0.02 0.11 7 3.25 80.12 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.85 Yes 50 88.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 205710263 - NM_022731 NUCKS1 1 0.03 0.15 9 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -17 0.53 No 53 79.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 27260739 + NM_006600 NUDC 1 4.08 15.97 72 2.73 87.75 21 4.06 No 63 -4.76 No 0 0 No -24 0.9 Yes 46 87.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 27268249 + NM_006600 NUDC 1 0.09 0.33 20 -4.95 0 9 3.87 No 37 0.6 No 0 0 No -28 0.63 No 42 80.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 27269126 + NM_006600 NUDC 1 0.15 0.74 35 -6.2 0 11 3.99 No 17 0.28 No 21 0.8 Yes -29 0.63 No 41 57.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 27269147 + NM_006600 NUDC 1 0.99 4.92 70 -1 67.39 19 5 No -4 0.68 No 21 0.8 Yes -18 0.46 No 47 58.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 27270094 + NM_006600 NUDC 1 0.26 0.9 38 7.56 89 22 5.2 No 9 1.11 Yes 0 0 No -21 0.74 Yes 49 72.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27272420 + NM_006600 NUDC 1 0.06 0.31 16 6.39 86.7 25 5.38 No 12 0.73 No 0 0 No -24 0.86 Yes 46 81.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 110257671 - NM_032869 NUDCD1 1 0.09 0.22 15 7.82 79.61 25 5.29 No 68 0.55 No 0 0 No -25 0.79 Yes 45 68.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 110283366 - NM_032869 NUDCD1 1 0.59 1.21 44 1.32 0 23 5.85 Yes 65 1.2 Yes 28 0.81 Yes -22 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 110305707 - NM_032869 NUDCD1 1 0.19 0.38 22 5.45 77.86 38 5.39 No 49 0.65 No 0 0 No -37 0.79 Yes 33 84.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 110326118 - NM_032869 NUDCD1 1 0.19 0.42 24 8.41 79.76 25 6.23 Yes 54 0.3 No 24 0.63 Yes -24 0.7 Yes 46 77.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 162886019 - NM_145266 NUDCD2 1 0.27 0.18 11 0.82 66.74 24 5.95 Yes 31 0.83 Yes 0 0 No -24 0.57 No 46 59.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 44434217 - NM_015332 NUDCD3 1 0.35 0.46 21 7.75 92.46 19 7 Yes 6 0.93 Yes 0 0 No -25 0.44 No 46 42.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 44452883 - NM_015332 NUDCD3 1 1.32 1.15 47 7.99 88.27 23 6.89 Yes 72 0.93 Yes 22 0.65 Yes -22 0.84 Yes 48 77.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44465753 - NM_015332 NUDCD3 1 0.73 0.64 32 6.19 76.05 23 6.8 Yes 10 1.35 Yes 22 0.85 Yes -22 0.68 Yes 36 33.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 44465791 - NM_015332 NUDCD3 1 0.61 0.53 27 6.08 92.13 32 4.64 No 19 0.24 No 22 0.85 Yes -28 0.61 No 47 53.59 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 44465879 - NM_015332 NUDCD3 1 2.19 2.01 59 9.95 91.58 26 6.7 Yes 13 1.41 Yes 25 0.89 Yes -25 0.75 Yes 45 74.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44521061 - NM_015332 NUDCD3 1 4.16 3.93 69 1.22 72.13 17 4.36 No 26 -3.63 No 0 0 No -21 0.64 No 49 70.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 44524224 - NM_015332 NUDCD3 1 0.18 0.18 10 12.31 98.02 35 6.06 Yes 51 1.5 Yes 25 0.85 Yes -34 0.56 No 39 65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44525222 - NM_015332 NUDCD3 1 1.56 1.49 48 5.86 81.53 27 5.4 No -4 0.57 No 26 0.76 Yes -26 0.76 Yes 44 55.49 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 2284753 + NM_198954 NUDT1 1 0.26 0.17 7 7.25 85.48 24 5.83 Yes 11 0.77 Yes 0 0 No -23 0.93 Yes 47 94.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2287659 + NM_198954 NUDT1 1 0.12 0.1 7 8.16 87.77 25 5.1 No 12 1.22 Yes 24 0.92 Yes -24 0.89 Yes 46 96.23 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2290437 + NM_198954 NUDT1 1 0.49 0.64 29 2.13 71.17 21 4.49 No 15 -2.84 No 28 0.91 Yes -26 0.76 Yes 44 76.34 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 2290486 + NM_198954 NUDT1 1 0.15 0.21 14 6.07 77.26 14 5.66 Yes 39 0.76 No 0 0 No -25 0.58 No 45 47.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 102895952 - NM_031438 NUDT12 1 10.22 1.94 56 -2.2 0 22 6.14 Yes 9 1.43 Yes 31 0.32 Yes -40 0.43 No 34 44.14 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 48615509 + NR_136688 NUDT15 1 0.7 0.64 29 1.86 67.06 21 5.55 No 8 2.35 Yes 0 0 No -20 0.51 No 50 41.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 48619779 + NR_136688 NUDT15 1 0.15 0.13 7 2.57 60.84 50 6.31 Yes 37 0.58 No 22 0.84 Yes -39 0.4 No 21 52.96 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 4743984 + NM_001193452 NUDT16L1 1 0.66 0.5 27 1.27 0 15 3.87 No 12 1.67 Yes 18 0.67 Yes -24 0.85 Yes 46 84.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 145586952 - NM_001012758 NUDT17 1 2.26 0.14 10 -2.38 0 27 5.29 No 56 0.58 No 0 0 No -26 0.71 Yes 44 54.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 33189359 + NM_001105570 NUDT19 1 1.6 0.81 40 3.31 69.64 53 7.52 Yes 55 1.09 Yes 0 0 No -39 0.38 No 27 41.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 33195188 + NM_001105570 NUDT19 1 1.23 0.58 31 9.1 88.27 20 5.57 Yes 7 1.44 Yes 0 0 No -24 0.49 No 46 76.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 33202640 + NM_001105570 NUDT19 1 0.24 0.26 14 1.46 52.51 26 8.34 Yes 13 0.33 No 24 0.42 Yes -25 0.4 No 38 38.44 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 34339028 + NM_001161 NUDT2 1 1.92 1.38 44 3.04 0 10 3.96 No 27 0.93 Yes 0 0 No -35 0.5 No 31 75.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 56473409 - NM_007006 NUDT21 1 0.46 2.97 68 5.44 87.64 25 4.97 No 59 0.7 No 24 0.92 Yes -24 0.88 Yes 46 86.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 63994872 + NM_032344 NUDT22 1 0.95 0.69 35 8.7 77.95 31 6.22 Yes 74 -2.41 No 30 0.7 Yes -30 0.59 No 40 72.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 63994895 + NM_032344 NUDT22 1 0.24 0.15 10 7.3 85.92 27 5.66 Yes 14 -0.56 No 0 0 No -19 0.42 No 44 56.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 63995113 + NM_032344 NUDT22 1 0.33 0.25 15 5.3 80.56 14 5.92 Yes 73 1.41 Yes 0 0 No -16 0.6 No 54 82.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 34256705 - NM_006703 NUDT3 1 0.04 0.11 8 -0.52 0 31 6.08 Yes 75 1.09 Yes 0 0 No -30 0.83 Yes 40 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34256708 - NM_006703 NUDT3 1 0.12 0.32 20 -5.39 0 28 5.83 Yes 72 1.09 Yes 0 0 No -27 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 34256733 - NM_006703 NUDT3 1 0.04 0.13 8 4.68 73.16 26 4.16 No 47 1.09 Yes 0 0 No -25 0.84 Yes 45 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34260312 - NM_006703 NUDT3 1 0.18 0.47 22 9.15 82.2 28 5.38 No 58 0.04 No 0 0 No -25 0.57 No 45 52.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 34263131 - NM_006703 NUDT3 1 0.05 0.14 8 -3.85 77.61 23 7.63 Yes 10 0.81 Yes 0 0 No -22 0.7 Yes 33 51.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 34263133 - NM_006703 NUDT3 1 0.2 0.51 25 5.96 79.84 21 7.5 Yes 8 0.81 Yes 0 0 No -20 0.52 No 35 48.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 34276985 - NM_006703 NUDT3 1 0.19 0.35 20 4.72 0 34 6.91 Yes 21 1.75 Yes 0 0 No -33 0.91 Yes 37 92.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34338270 - NM_006703 NUDT3 1 0.25 0.29 17 5.03 76.45 26 5 No 49 2.12 Yes 0 0 No -25 0.86 Yes 45 93.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 93792546 + NM_001301022 NUDT4 1 1.15 2.32 65 5.4 80.24 29 6.38 Yes 63 1.25 Yes 25 0.64 Yes -28 0.6 No 42 54.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 93791323 + NM_001301022 NUDT4 1 0.13 0.28 17 11.11 88.27 22 6.45 Yes 27 0.6 No 0 0 No -22 0.52 No 48 61.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 93792546 + NM_001301022 NUDT4 1 181.87 365.74 72 5.4 80.24 29 6.38 Yes 63 1.25 Yes 25 0.64 Yes -28 0.6 No 42 54.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 93792956 + NM_001301022 NUDT4 1 1.17 5.19 72 1.63 0 28 8.98 Yes 15 1.26 Yes 0 0 No -27 0.86 Yes 43 82.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12212156 - NM_001321648 NUDT5 1 0.09 0.42 20 7.71 74.86 24 6.55 Yes 11 0.08 No 23 0.57 Yes -23 0.58 No 47 67.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 12212470 - NM_001321648 NUDT5 1 0.08 0.33 18 8.32 93.87 26 4.99 No 51 -2.97 No 0 0 No -18 0.57 No 52 64.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 12212768 - NM_001321648 NUDT5 1 0.33 0.76 35 -3.98 78.38 41 6.48 Yes 28 1.23 Yes 0 0 No -23 0.92 Yes 47 76.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12227657 - NM_001321648 NUDT5 1 0.03 0.13 8 8.72 80.42 62 7.43 Yes 43 1.15 Yes 0 0 No -28 0.64 No 42 66.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12227967 - NM_001321648 NUDT5 1 0.11 0.43 24 10.3 80.16 37 5.69 Yes 9 0.93 Yes 0 0 No -22 0.59 No 48 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 12228313 - NM_001321648 NUDT5 1 0.17 0.57 32 -7.66 78.35 16 5.09 No 29 0.84 Yes 0 0 No -21 0.43 No 29 39.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12229959 - NM_001321648 NUDT5 1 0.16 0.56 29 0.69 0 32 7.94 Yes 19 1.39 Yes 0 0 No -31 0.92 Yes 39 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12234440 - NM_001321648 NUDT5 1 0.2 0.74 36 5.01 81.25 27 5.75 Yes 14 1.06 Yes 0 0 No -26 0.56 No 44 84.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 12235376 - NM_001321648 NUDT5 1 0.03 0.1 7 7.51 71.01 35 5.73 Yes -3 0.41 No 0 0 No -34 0.51 No 36 59.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 88366281 + NM_001248011 NUDT9 1 0.32 0.17 8 9.25 92.89 28 5.54 No 67 0.38 No 0 0 No -27 0.41 No 43 72.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 88366473 + NM_001248011 NUDT9 1 1.46 0.65 35 9.51 77.94 31 5.72 Yes 25 0.49 No 30 0.62 Yes -25 0.68 Yes 45 84.72 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 88372479 + NM_001248011 NUDT9 1 0.22 0.17 9 5.09 80.2 23 4.8 No 10 2.43 Yes 0 0 No -22 0.91 Yes 48 95.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 88375524 + NM_001248011 NUDT9 1 0.2 0.19 13 -17.69 0 29 8.56 Yes 53 0.89 Yes 0 0 No -29 0.32 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 163292656 + NM_145697 NUF2 1 0.57 0.33 20 6.33 84.05 29 3.94 No 59 0.87 Yes 24 0.79 Yes -28 0.76 Yes 42 73.71 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 163295083 + NM_145697 NUF2 1 0.19 0.1 7 7.6 81.94 10 5.66 Yes 76 0.58 No 0 0 No -22 0.74 Yes 48 84.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 163298247 + NM_145697 NUF2 1 0.33 0.25 15 5.44 72.98 68 8.54 Yes 73 0.78 Yes 22 0.73 Yes -26 0.58 No 48 63.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 163304110 + NM_145697 NUF2 1 0.11 0.13 9 6.44 87.91 33 5.99 Yes 20 1.06 Yes 0 0 No -32 0.75 Yes 38 71.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 163306543 + NM_145697 NUF2 1 0.15 0.13 9 2.32 77.99 27 5.28 No 32 -1.43 No 0 0 No -27 0.74 Yes 43 83.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 163310157 + NM_145697 NUF2 1 0.13 0.13 7 1.7 0 35 6.61 Yes 74 1.14 Yes 25 0.61 Yes -34 0.24 No 36 48.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 163315471 + NM_145697 NUF2 1 0.8 0.65 35 -4.06 0 37 6.39 Yes 71 -4.27 No 0 0 No -36 0.42 No 34 58.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 45532132 - NM_012345 NUFIP1 1 0.26 0.21 9 6.7 60.8 34 7.68 Yes 21 1.53 Yes 0 0 No -33 0.88 Yes 37 90.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 45553417 - NM_012345 NUFIP1 1 0.3 0.18 12 4.77 82.27 25 6.02 Yes -1 0.64 No 20 0.95 Yes -29 0.51 No 41 61.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 27617890 - NM_020772 NUFIP2 1 0.28 0.68 36 8.26 92.65 32 5.57 Yes 59 0.23 No 0 0 No -31 0.66 No 46 73.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 71715159 - NR_104476 NUMA1 1 0.08 0.15 9 6.44 76.29 13 5.66 Yes 75 -4.34 No 19 0.48 Yes -22 0.78 Yes 48 66.46 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 71716613 - NR_104476 NUMA1 1 0.1 0.11 7 11.35 91.11 21 6.4 Yes 8 1.73 Yes 0 0 No -20 0.57 No 50 63.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 71717307 - NR_104476 NUMA1 1 0.48 0.69 28 3.19 74.07 18 5.47 No 5 1.07 Yes 0 0 No -26 0.94 Yes 44 91.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71718497 - NR_104476 NUMA1 1 0.35 0.43 26 0.95 85.11 20 5 No 75 0.67 No 20 0.96 Yes -25 0.7 Yes 51 42.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 71719111 - NR_104476 NUMA1 1 0.32 0.38 19 11.27 86.24 30 5.29 No 40 0.82 Yes 23 0.69 Yes -29 0.91 Yes 41 91.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71719192 - NR_104476 NUMA1 1 0.84 1.04 43 5.92 80.55 23 6.03 Yes 10 0.94 Yes 22 0.93 Yes -22 0.7 Yes 48 89.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 71742339 - NR_104476 NUMA1 1 0.68 0.75 36 5.15 84.41 33 5.98 Yes 42 1.58 Yes 0 0 No -32 0.91 Yes 38 95.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71760582 - NR_104476 NUMA1 1 0.85 0.46 24 5.35 0 25 6.31 Yes 75 -3.86 No 0 0 No -27 0.22 No 43 33.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71760586 - NR_104476 NUMA1 1 26.41 13.1 72 8.14 87.82 21 6.17 Yes 71 -3.86 No 27 0.44 Yes -29 0.22 No 47 32.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 71761871 - NR_104476 NUMA1 1 0.34 0.13 8 -2.66 0 15 4.17 No 69 -3.06 No 0 0 No -32 0.49 No 30 75.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 71761880 - NR_104476 NUMA1 1 0.77 0.35 19 -6.3 72.99 28 5.81 Yes 60 -3.05 No 27 0.56 Yes -23 0.55 No 39 65.6 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 71773733 - NR_104476 NUMA1 1 0.94 0.53 26 8.36 84.62 16 5.2 No 3 1.64 Yes 27 0.72 Yes -27 0.58 No 43 41.84 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 71779278 - NR_104476 NUMA1 1 15.45 7.65 72 8.55 83.34 18 3.99 No 58 -2.93 No 28 0.37 Yes -28 0.38 No 42 53.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 71779664 - NR_104476 NUMA1 1 5.35 2.67 64 11.36 95.65 40 6.48 Yes 67 0.74 No 31 0.18 Yes -35 0.4 No 44 63.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 73746133 - NM_001320114 NUMB 1 47.42 47.6 72 7.87 77.06 32 7.89 Yes 10 1.21 Yes 22 0.76 Yes -31 0.8 Yes 39 83.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 73746133 - NM_001320114 NUMB 1 0.17 0.18 11 7.87 77.06 32 7.89 Yes 10 1.21 Yes 22 0.76 Yes -31 0.8 Yes 39 83.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 73748246 - NM_001320114 NUMB 1 0.27 0.29 16 3.45 80.75 29 6.71 Yes 16 0.8 Yes 29 0.83 Yes -29 0.8 Yes 41 81.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 73751074 - NM_001320114 NUMB 1 9.24 14.99 72 -0.9 0 12 4.24 No 25 1.07 Yes 0 0 No -37 0.81 Yes 33 87.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 73759534 - NM_001320114 NUMB 1 0.04 0.14 10 7.18 87.6 16 5.2 No 71 0.46 No 24 0.6 Yes -24 0.71 Yes 46 66.57 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 73763513 - NM_001320114 NUMB 1 0.05 0.14 7 5.92 82.31 22 5.83 Yes 58 1.04 Yes 0 0 No -21 0.85 Yes 49 84.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 73824304 - NM_001320114 NUMB 1 3.8 0.63 29 6.53 86.16 20 7.14 Yes 7 1.1 Yes 0 0 No -19 0.59 No 51 75.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 73833690 - NM_001320114 NUMB 1 658.82 117.63 72 11.33 91.41 27 3.92 No 14 0.2 No 26 0.65 Yes -26 0.72 Yes 44 72.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 73838567 - NM_001320114 NUMB 1 1.89 0.35 18 6.57 89.97 27 5.2 No 62 1.33 Yes 0 0 No -29 0.43 No 41 42.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 73866079 - NM_001320114 NUMB 1 1.87 0.35 23 4.35 90.56 12 5.39 No 32 1.15 Yes 0 0 No -28 0.38 No 48 43.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 73876057 - NM_001320114 NUMB 1 3.33 0.53 32 5.26 84.65 34 7.29 Yes 21 1.04 Yes 0 0 No -38 0.73 Yes 37 79.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 73876398 - NM_001320114 NUMB 1 0.78 0.15 10 10.74 90.79 35 6.21 Yes 18 0.48 No 30 0.68 Yes -34 0.46 No 36 63.88 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 69090630 + NM_001330192 NUP107 1 0.45 0.42 23 9.43 86.44 25 5.55 No 60 1.23 Yes 27 0.37 Yes -27 0.48 No 43 68.27 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 69097952 + NM_001330192 NUP107 1 0.37 0.57 29 10.37 87.4 23 5.74 Yes 62 0.71 No 0 0 No -29 0.57 No 41 58.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 69107688 + NM_001330192 NUP107 1 0.48 1.1 47 9.14 83.56 41 6.85 Yes 50 1.31 Yes 0 0 No -40 0.74 Yes 43 56.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 69108460 + NM_001330192 NUP107 1 0.17 0.44 24 2.48 68.87 39 5.15 No 43 0.54 No 0 0 No -32 0.47 No 32 64.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 69119508 + NM_001330192 NUP107 1 0.19 0.22 13 -6.92 82.6 19 6.14 Yes 70 0.83 Yes 0 0 No -29 0.86 Yes 41 93.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229579292 - NM_018230 NUP133 1 0.38 0.46 23 7.27 82.31 22 5.74 Yes 9 0.38 No 0 0 No -21 0.59 No 49 70.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 229588601 - NM_018230 NUP133 1 0.09 0.1 7 5.48 71.55 47 6.3 Yes 47 1.47 Yes 0 0 No -46 0.86 Yes 24 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229601635 - NM_018230 NUP133 1 0.08 0.13 8 -0.14 83.13 52 8.09 Yes 39 2.94 Yes 0 0 No -38 0.78 Yes 32 74.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229611477 - NM_018230 NUP133 1 0.09 0.17 11 0.2 70.25 28 4.99 No 15 0.91 Yes 0 0 No -27 0.7 Yes 43 70.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229622875 - NM_018230 NUP133 1 0.13 0.1 7 7.83 74.13 27 5.71 Yes 14 1.18 Yes 0 0 No -31 0.59 No 39 66.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 229624593 - NM_018230 NUP133 1 0.4 0.54 27 4.83 83.64 36 6.7 Yes 23 1.14 Yes 0 0 No -35 0.79 Yes 35 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229633586 - NM_018230 NUP133 1 0.2 0.26 16 7.25 80.36 15 4.98 No -3 0.8 Yes 0 0 No -22 0.86 Yes 48 91.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229634968 - NM_018230 NUP133 1 1.16 1.17 53 9.39 89.45 30 5.89 Yes 76 0.28 No 30 0.53 Yes -30 0.53 No 40 85.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr6 17616429 - NM_001278210 NUP153 1 0.09 0.13 7 0.83 64.09 25 4.43 No 32 -1.39 No 22 0.68 Yes -24 0.92 Yes 46 88.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 17629312 - NM_001278210 NUP153 1 0.1 0.25 12 3.92 65.91 31 6.92 Yes 18 1.54 Yes 0 0 No -30 0.85 Yes 40 75.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 17633067 - NM_001278210 NUP153 1 0.08 0.14 9 -8.87 0 12 4.24 No 62 0.59 No 0 0 No -51 0.58 No 19 59.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 17633810 - NM_001278210 NUP153 1 4.37 7.88 71 9.03 77.54 31 6.35 Yes 50 1.57 Yes 0 0 No -34 0.86 Yes 40 87.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 17651529 - NM_001278210 NUP153 1 0.1 0.26 18 3.65 83.57 37 8.21 Yes 24 0.61 No 0 0 No -25 0.61 No 33 42.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 17652158 - NM_001278210 NUP153 1 1.2 3.33 65 4.8 69.18 32 6.83 Yes 19 0.1 No 31 0.26 Yes -31 0.44 No 39 56.42 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 17661542 - NM_001278210 NUP153 1 0.82 2.15 63 7.48 83.11 29 6.48 Yes 16 0.56 No 0 0 No -28 0.63 No 42 64.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 17661952 - NM_001278210 NUP153 1 0.07 0.18 12 4.79 74.82 22 5.74 Yes 67 0.51 No 0 0 No -26 0.72 Yes 44 82.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 17661987 - NM_001278210 NUP153 1 1.65 3.83 68 6.91 75.65 34 5.73 Yes 49 0.63 No 0 0 No -57 0.77 Yes 44 47.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 17669792 - NM_001278210 NUP153 1 0.09 0.26 12 2.42 58.85 29 5.92 Yes 46 0.23 No 20 0.5 Yes -28 0.73 Yes 42 59.69 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 17673575 - NM_001278210 NUP153 1 0.06 0.15 9 6.55 0 23 6 Yes 39 0.73 No 0 0 No -22 0.5 No 48 79.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 17675598 - NM_001278210 NUP153 1 0.13 0.36 20 -11.72 0 15 5.18 No 66 0.83 Yes 0 0 No -26 0.66 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 17675966 - NM_001278210 NUP153 1 1.33 3.89 70 4.81 78.47 30 3.99 No 40 1.33 Yes 0 0 No -26 0.75 Yes 49 46.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 17680123 - NM_001278210 NUP153 1 0.08 0.24 16 0.32 79.2 29 4.27 No 16 0.6 No 0 0 No -29 0.78 Yes 41 81.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 37303006 - NM_001278312 NUP155 1 0.19 0.32 18 2.77 0 29 5.32 No 56 1.11 Yes 0 0 No -28 0.75 Yes 42 66.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 37314429 - NM_001278312 NUP155 1 0.57 0.78 36 3.65 86.78 25 6.55 Yes 12 0.75 No 0 0 No -24 0.35 No 43 31.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 37336530 - NM_001278312 NUP155 1 0.07 0.1 7 5.18 77.54 31 7.55 Yes 18 1.74 Yes 0 0 No -30 0.84 Yes 40 92.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37340542 - NM_001278312 NUP155 1 0.23 0.19 13 4.84 88.76 35 5.24 No 22 1.43 Yes 0 0 No -26 0.55 No 44 51.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 37350268 - NM_001278312 NUP155 1 0.11 0.14 7 3.97 81.18 45 7.15 Yes 32 1.51 Yes 0 0 No -44 0.94 Yes 26 93.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37362777 - NM_001278312 NUP155 1 0.11 0.15 11 7.39 89.17 25 7.38 Yes 61 1.36 Yes 0 0 No -24 0.7 Yes 46 68.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 37370849 - NM_001278312 NUP155 1 0.18 0.22 11 5.05 83.02 28 6.24 Yes 15 1.94 Yes 0 0 No -27 0.83 Yes 43 92.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47804699 - NM_015231 NUP160 1 1.57 1.58 52 4.43 76.65 46 5.77 Yes 24 1.1 Yes 0 0 No -23 0.5 No 47 68.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47804748 - NM_015231 NUP160 1 3.37 3.53 68 2.55 77.73 22 4.15 No 60 0.89 Yes 0 0 No -22 0.5 No 40 70.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 47806608 - NM_015231 NUP160 1 0.1 0.11 7 1.5 0 12 4.12 No 27 0.54 No 0 0 No -33 0.96 Yes 37 98.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 47825112 - NM_015231 NUP160 1 0.09 0.14 10 6.12 86.92 20 5.47 No 7 1.08 Yes 0 0 No -24 0.58 No 46 52.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47833009 - NM_015231 NUP160 1 0.08 0.13 8 4.45 84.95 25 5.48 No 12 0 No 0 0 No -24 0.67 Yes 46 66.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 47843371 - NM_015231 NUP160 1 0.08 0.17 11 -9.01 77.32 63 7.19 Yes 44 1.63 Yes 0 0 No -37 0.88 Yes 33 80.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47848747 - NM_015231 NUP160 1 0.71 0.92 43 5.44 80.12 22 7.28 Yes 9 1.23 Yes 0 0 No -21 0.87 Yes 49 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 47862137 - NM_015231 NUP160 1 0.15 0.18 12 -4.35 0 37 6.86 Yes 51 -2.88 No 0 0 No -28 0.51 No 42 43.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 47867518 - NM_015231 NUP160 1 0.13 0.15 9 8.88 86.91 23 5.83 Yes 72 1.53 Yes 0 0 No -22 0.86 Yes 48 90.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131710780 + NM_015354 NUP188 1 0.77 0.39 20 7.91 88.68 23 5.2 No 30 0.76 No 0 0 No -22 0.47 No 50 40.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 131715057 + NM_015354 NUP188 1 0.11 0.15 8 -3.81 0 9 3.87 No 11 1 Yes 0 0 No -35 0.69 Yes 35 79.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131720292 + NM_015354 NUP188 1 0.2 0.43 22 3.43 0 27 6.76 Yes 14 1.42 Yes 23 0.91 Yes -26 0.63 No 43 69.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 131728680 + NM_015354 NUP188 1 0.07 0.15 9 3.5 0 28 8.72 Yes 68 -1.65 No 0 0 No -28 0.49 No 43 39.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 131730788 + NM_015354 NUP188 1 0.27 0.54 27 -0.7 0 45 6.73 Yes 32 1.3 Yes 0 0 No -49 0.69 Yes 21 70.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131731687 + NM_015354 NUP188 1 0.25 0.36 22 1 0 12 4.24 No 61 1.54 Yes 0 0 No -36 0.39 No 34 56.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131742465 + NM_015354 NUP188 1 0.09 0.19 13 6.28 80.31 35 5.79 Yes 25 1.37 Yes 0 0 No -37 0.52 No 33 52.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131746425 + NM_015354 NUP188 1 0.12 0.17 9 4.74 84.41 24 7 Yes 11 1.51 Yes 0 0 No -23 0.91 Yes 47 88.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131750194 + NM_015354 NUP188 1 0.2 0.17 10 8.7 75.45 22 5.61 Yes 6 0.84 Yes 0 0 No -21 0.81 Yes 49 76.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131749082 + NM_015354 NUP188 1 0.06 0.13 8 -6.34 78.73 35 4.32 No 27 -0.8 No 39 0.69 Yes -24 0.84 Yes 46 83.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 131750194 + NM_015354 NUP188 1 0.81 0.81 36 8.7 75.45 22 5.61 Yes 6 0.84 Yes 0 0 No -21 0.81 Yes 49 76.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131752431 + NM_015354 NUP188 1 3.7 8.08 72 6.05 75.61 28 6.25 Yes 44 1.04 Yes 27 0.92 Yes -27 0.93 Yes 43 97.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 131755553 + NM_015354 NUP188 1 0.28 0.63 29 6.39 76.13 42 7.88 Yes 11 1.14 Yes 0 0 No -23 0.63 No 47 75.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 131757382 + NM_015354 NUP188 1 0.23 0.44 24 1.53 82.41 46 7.2 Yes 33 0.67 No 24 0.82 Yes -20 0.42 No 50 62.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 131761438 + NM_015354 NUP188 1 0.39 0.54 26 2.59 74.12 25 5.5 No 66 1.55 Yes 18 0.79 Yes -24 0.53 No 46 52.86 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 131761458 + NM_015354 NUP188 1 0.11 0.18 10 -10.48 0 11 3.87 No 76 0.81 Yes 0 0 No -26 0.71 Yes 44 46.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 131765673 + NM_015354 NUP188 1 0.29 0.44 24 8.52 91.59 24 6.24 Yes 51 -3.04 No 0 0 No -21 0.82 Yes 49 72.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131767671 + NM_015354 NUP188 1 0.18 0.19 14 6.15 71.84 38 6.91 Yes 52 1.1 Yes 0 0 No -23 0.52 No 33 43.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131767674 + NM_015354 NUP188 1 1.19 1.25 45 6.29 74.89 41 7.12 Yes 55 1.11 Yes 0 0 No -26 0.49 No 30 46.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131768569 + NM_015354 NUP188 1 0.07 0.11 8 8.28 89.76 43 7.71 Yes 30 0.78 Yes 0 0 No -36 0.77 Yes 34 73.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 135270320 + NM_001329434 NUP205 1 0.09 0.11 7 1.87 84.41 28 5.19 No 15 0.24 No 0 0 No -27 0.62 No 43 53.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 135283544 + NM_001329434 NUP205 1 0.58 0.67 33 9.69 88.1 18 5.97 Yes 69 0.98 Yes 22 0.66 Yes -22 0.78 Yes 48 90.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 135312723 + NM_001329434 NUP205 1 0.15 0.35 19 -8.64 0 42 7.63 Yes 76 1.14 Yes 0 0 No -41 0.51 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 135320311 + NM_001329434 NUP205 1 0.14 0.31 17 4.13 70.08 35 6.96 Yes 22 0.92 Yes 22 0.57 Yes -34 0.65 No 36 71.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 135322684 + NM_001329434 NUP205 1 0.15 0.24 15 0.57 0 9 3.87 No 74 1.26 Yes 0 0 No -29 0.7 Yes 41 80.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 135330584 + NM_001329434 NUP205 1 0.08 0.24 11 5.23 86.56 16 4.69 No 17 0.97 Yes 19 0.57 Yes -29 0.79 Yes 41 94.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 135333157 + NM_001329434 NUP205 1 0.11 0.22 14 -0.99 0 15 3.87 No 21 0.44 No 0 0 No -33 0.91 Yes 37 90.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13362923 - NM_024923 NUP210 1 0.11 0.24 17 10.02 82.82 25 4.91 No 12 0.41 No 0 0 No -24 0.44 No 46 45.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 13365017 - NM_024923 NUP210 1 0.17 0.33 15 3.8 74.27 15 5.82 Yes 76 0.73 No 0 0 No -23 0.5 No 47 51.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 13365080 - NM_024923 NUP210 1 0.19 0.36 21 6.84 70.26 40 6.5 Yes 27 1.02 Yes 0 0 No -25 0.89 Yes 45 79.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13368936 - NM_024923 NUP210 1 0.32 0.92 39 -1.32 76.11 31 5.92 Yes 18 0.88 Yes 0 0 No -30 0.89 Yes 40 87.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13369198 - NM_024923 NUP210 1 0.13 0.33 17 6.45 85.35 22 5.29 No 9 1 Yes 0 0 No -21 0.78 Yes 49 85.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13372388 - NM_024923 NUP210 1 0.04 0.13 8 3.01 76.88 37 6.4 Yes -1 1.15 Yes 0 0 No -36 0.94 Yes 34 94.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13372458 - NM_024923 NUP210 1 0.1 0.26 13 1.21 73.87 15 5.29 No 71 0.49 No 0 0 No -21 0.87 Yes 49 85.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13374114 - NM_024923 NUP210 1 0.06 0.13 7 7.27 75.1 22 7.2 Yes 9 1.02 Yes 0 0 No -21 0.9 Yes 49 94.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13379406 - NM_024923 NUP210 1 0.1 0.22 15 1.8 0 15 4.58 No 21 0.7 No 0 0 No -33 0.77 Yes 37 79.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13381481 - NM_024923 NUP210 1 0.06 0.11 7 5.99 87.99 26 4.42 No 68 1.96 Yes 0 0 No -25 0.77 Yes 45 87.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13381481 - NM_024923 NUP210 1 0.25 0.58 27 5.99 87.99 26 4.42 No 68 1.96 Yes 0 0 No -25 0.77 Yes 45 87.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13381782 - NM_024923 NUP210 1 0.59 1.51 53 7.06 91.62 23 5 No 10 0.71 No 0 0 No -22 0.93 Yes 48 93.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13382628 - NM_024923 NUP210 1 0.04 0.11 7 1.73 0 14 4.22 No 1 0.2 No 0 0 No -22 0.41 No 48 53.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 13386476 - NM_024923 NUP210 1 0.08 0.19 12 2.48 74.51 15 6.87 Yes 2 0.56 No 0 0 No -24 0.53 No 46 37.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 13388869 - NM_024923 NUP210 1 0.89 1.76 60 1.93 66.6 42 6.54 Yes 29 1.05 Yes 0 0 No -25 0.7 Yes 45 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 13389409 - NM_024923 NUP210 1 2.28 4.72 70 10.06 91.92 18 6.95 Yes 5 1.13 Yes 0 0 No -29 0.75 Yes 41 84.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13390249 - NM_024923 NUP210 1 0.32 0.67 36 9.23 87.54 21 5.74 Yes 41 -0.44 No 0 0 No -20 0.81 Yes 50 77.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13390328 - NM_024923 NUP210 1 0.21 0.5 28 6.99 80.84 15 5.3 No 59 0.68 No 0 0 No -22 0.94 Yes 48 95.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13390348 - NM_024923 NUP210 1 4.32 8.68 72 5.97 78.37 52 7.31 Yes 39 0.69 No 0 0 No -51 0.73 Yes 19 86.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13390655 - NM_024923 NUP210 1 0.05 0.1 7 7.5 89.97 22 5.1 No 16 0.2 No 0 0 No -19 0.6 No 51 49.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 13393651 - NM_024923 NUP210 1 0.06 0.13 8 8.64 70.8 31 6.55 Yes 45 1.39 Yes 0 0 No -30 0.48 No 40 61.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 13394274 - NM_024923 NUP210 1 0.3 0.65 32 -3.62 68.49 34 7.92 Yes 21 1.81 Yes 0 0 No -29 0.65 No 41 80.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 13394355 - NM_024923 NUP210 1 0.35 0.85 35 9.35 87.27 21 5 No 73 1.91 Yes 0 0 No -20 0.46 No 50 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 13399546 - NM_024923 NUP210 1 0.31 0.68 30 7.94 94.12 20 4.53 No -4 -1.71 No 0 0 No -19 0.74 Yes 51 78.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13418093 - NM_024923 NUP210 1 0.39 1.29 48 6.56 85.42 19 4.69 No 6 0.38 No 0 0 No -18 0.9 Yes 52 85.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 13419038 - NM_024923 NUP210 1 0.25 0.68 31 7.62 76.7 21 5.82 Yes 8 0.88 Yes 0 0 No -47 0.58 No 50 68.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 13426068 - NM_024923 NUP210 1 0.09 0.29 14 8.83 87.19 20 4.42 No 56 1.08 Yes 0 0 No -25 0.63 No 45 46.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 13427419 - NM_024923 NUP210 1 0.06 0.21 13 5.44 79.67 27 6.43 Yes 14 1.01 Yes 0 0 No -26 0.77 Yes 44 76.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13438983 - NM_024923 NUP210 1 0.07 0.13 9 0.33 0 9 3.87 No 17 2.37 Yes 0 0 No -29 0.72 Yes 41 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13441853 - NM_024923 NUP210 1 0.3 0.61 23 8.06 92.87 23 5.83 Yes 10 0.84 Yes 0 0 No -22 0.96 Yes 48 95.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13455613 - NM_024923 NUP210 1 2.44 4.17 67 6.62 77.43 43 10.16 Yes 58 2.09 Yes 0 0 No -42 0.93 Yes 28 95.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 13460287 - NM_024923 NUP210 1 0.13 0.24 16 9.52 87.15 30 7.07 Yes 17 1.43 Yes 0 0 No -29 0.93 Yes 41 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134019954 + NM_001318324 NUP214 1 3.02 2.6 65 6.35 72.38 30 4.97 No 17 0.44 No 29 0.45 Yes -29 0.68 Yes 38 86.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 134021515 + NM_001318324 NUP214 1 1.4 0.14 8 7.23 89.91 18 4.9 No 13 0.29 No 25 0.73 Yes -25 0.76 Yes 53 55.41 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 134021500 + NM_001318324 NUP214 1 1.29 0.18 11 -0.68 0 11 4.12 No 59 0.24 No 25 0.73 Yes -24 0.53 No 47 53.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 134021515 + NM_001318324 NUP214 1 790.43 86.69 72 7.23 89.91 18 4.9 No 13 0.29 No 25 0.73 Yes -25 0.76 Yes 53 55.41 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 134021551 + NM_001318324 NUP214 1 31.67 3.39 71 2.69 71.3 21 5.56 Yes 49 0.3 No 0 0 No -24 0.81 Yes 46 88.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134021597 + NM_001318324 NUP214 1 3.79 0.42 22 3.59 74.4 28 6.78 Yes 39 -2.13 No 0 0 No -27 0.63 No 43 81.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 134021601 + NM_001318324 NUP214 1 1.35 0.17 10 1.37 0 32 7.07 Yes 43 -2.13 No 0 0 No -31 0.6 No 39 80.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 134022876 + NM_001318324 NUP214 1 435.59 100.86 72 7.39 94.87 18 7.03 Yes 5 1.65 Yes 18 0.56 Yes -21 0.73 Yes 49 35.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 134033057 + NM_001318324 NUP214 1 0.09 0.14 10 1.56 0 41 7.21 Yes 28 1.42 Yes 0 0 No -40 0.88 Yes 30 96.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134046050 + NM_001318324 NUP214 1 0.11 0.13 7 8.49 86.75 23 6.44 Yes 10 0.79 Yes 0 0 No -22 0.79 Yes 44 67.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 134049213 + NM_001318324 NUP214 1 0.15 0.19 9 9.53 87.09 36 6.14 Yes 23 1.4 Yes 0 0 No -35 0.76 Yes 35 71.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134049473 + NM_001318324 NUP214 1 0.36 0.43 24 6.37 87.92 17 4.57 No 48 0.9 Yes 0 0 No -19 0.43 No 51 71.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 134062118 + NM_001318324 NUP214 1 0.07 0.1 7 3.94 80.51 24 4.94 No 50 0.74 No 0 0 No -23 0.69 Yes 47 60.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 134082712 + NM_001318324 NUP214 1 0.34 0.35 21 4.5 85.62 25 5.29 No 55 -4.23 No 0 0 No -24 0.93 Yes 46 93.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134086834 + NM_001318324 NUP214 1 0.1 0.11 7 2.52 75.94 35 5.22 No 50 0.33 No 0 0 No -34 0.75 Yes 36 89.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134091017 + NM_001318324 NUP214 1 0.11 0.13 7 10.34 82.97 26 5.66 Yes 13 0.91 Yes 0 0 No -25 0.92 Yes 45 91.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134105049 + NM_001318324 NUP214 1 0.56 0.44 25 8.64 94.12 23 3.76 No 0 0.92 Yes 25 0.75 Yes -25 0.61 No 45 60.55 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 134106011 + NM_001318324 NUP214 1 0.86 0.68 33 -7.17 77.35 25 5.1 No 12 1.99 Yes 29 0.9 Yes -24 0.93 Yes 46 95.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 183991413 + NM_001287585 NUP35 1 0.11 0.11 7 6.97 80.3 50 8.02 Yes 73 0.75 No 0 0 No -49 0.58 No 21 69.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 183998388 + NM_001287585 NUP35 1 0.08 0.1 7 6.85 83.77 31 6.32 Yes 18 1.1 Yes 0 0 No -30 0.93 Yes 40 96.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 184023358 + NM_001287585 NUP35 1 0.12 0.15 9 11.99 91.9 28 5.11 No 5 1.82 Yes 0 0 No -27 0.8 Yes 43 80.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 184024217 + NM_001287585 NUP35 1 0.11 0.1 7 -7.75 77.3 21 5.55 No 68 0.1 No 0 0 No -32 0.31 No 39 41.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 184024264 + NM_001287585 NUP35 1 0.6 0.54 25 7.47 77.24 31 5.92 Yes 18 1.12 Yes 0 0 No -30 0.64 No 40 84.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 102472995 - NM_024057 NUP37 1 0.53 1.06 41 9.27 86.36 25 6.22 Yes 12 0.83 Yes 24 0.8 Yes -24 0.86 Yes 46 73.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 102474192 - NM_024057 NUP37 1 0.06 0.14 9 2.5 0 36 5.87 Yes 47 0.98 Yes 0 0 No -43 0.8 Yes 35 80.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102478255 - NM_024057 NUP37 1 0.09 0.17 10 7.14 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -28 0.46 No 51 74.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 102506007 - NM_024057 NUP37 1 0.06 0.17 10 -6.61 0 68 8.05 Yes 26 0.54 No 0 0 No -31 0.88 Yes 39 88.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 102509643 - NM_024057 NUP37 1 0.16 0.47 26 7.79 81.65 35 6.26 Yes 12 0.6 No 24 0.69 Yes -24 0.41 No 46 40.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 102511217 - NM_024057 NUP37 1 0.1 0.28 18 10.96 95.65 28 3.44 No 37 0.94 Yes 0 0 No -27 0.61 No 43 60.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 150048618 - NR_104456 NUP43 1 0.37 0.43 25 -0.24 72.72 74 9.82 Yes 61 1.16 Yes 0 0 No -35 0.82 Yes 35 34.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 150049615 - NR_104456 NUP43 1 2.37 3 65 3.79 77.77 30 5.04 No 0 0.11 No 0 0 No -29 0.79 Yes 41 90.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 150049697 - NR_104456 NUP43 1 1.29 1.64 51 6.91 85.28 19 5.97 Yes -2 0.15 No 0 0 No -22 0.7 Yes 48 62.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 150050670 - NR_104456 NUP43 1 0.2 0.25 13 -0.83 55.62 46 6.77 Yes 33 0.42 No 0 0 No -22 0.61 No 25 31.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 150051900 - NR_104456 NUP43 1 1.59 1.88 55 8.05 86.44 27 6.16 Yes 14 1.3 Yes 0 0 No -26 0.82 Yes 44 91.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 150064851 - NR_104456 NUP43 1 0.05 0.1 7 -12.02 0 25 5 No 29 1.38 Yes 0 0 No -24 0.79 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 45567689 + NM_153645 NUP50 1 0.44 1.32 42 7.97 82.86 44 7.22 Yes 76 0.72 No 23 0.83 Yes -23 0.67 Yes 32 44.37 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 45569832 + NM_153645 NUP50 1 0.36 0.99 44 5.25 76.52 21 5.97 Yes 45 1.51 Yes 0 0 No -27 0.44 No 43 45.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 45571647 + NM_153645 NUP50 1 0.06 0.18 9 4.96 76.7 28 7.34 Yes 15 0.74 No 0 0 No -27 0.87 Yes 43 80.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 45571799 + NM_153645 NUP50 1 0.29 0.81 35 -6.63 0 19 4.24 No 39 1.52 Yes 0 0 No -56 0.64 No 19 85.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 45574471 + NM_153645 NUP50 1 0.07 0.21 12 1.32 63.97 42 6.48 Yes 29 0.74 No 0 0 No -37 0.49 No 33 84.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 45574680 + NM_153645 NUP50 1 0.08 0.18 11 1.96 69.5 33 7.34 Yes 20 2.03 Yes 0 0 No -32 0.84 Yes 38 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 45574160 + NM_153645 NUP50 1 0.12 0.32 20 0.56 67.68 47 6.99 Yes 41 1.17 Yes 0 0 No -29 0.66 No 17 62.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 45574471 + NM_153645 NUP50 1 0.23 0.65 31 1.32 63.97 42 6.48 Yes 29 0.74 No 0 0 No -37 0.49 No 33 84.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 45574511 + NM_153645 NUP50 1 0.05 0.15 9 -3.28 54.06 33 6.16 Yes 69 0.72 No 0 0 No -32 0.84 Yes 28 50.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 45574680 + NM_153645 NUP50 1 0.06 0.15 9 1.96 69.5 33 7.34 Yes 20 2.03 Yes 0 0 No -32 0.84 Yes 38 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 45576100 + NM_153645 NUP50 1 0.05 0.15 10 4.19 81.04 33 5.75 Yes 20 1.06 Yes 0 0 No -32 0.83 Yes 38 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 45579939 + NM_153645 NUP50 1 0.18 0.56 23 5.21 89.54 26 5.32 No 13 0.46 No 0 0 No -25 0.42 No 42 46.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 45580440 + NM_153645 NUP50 1 0.07 0.24 12 -5.51 57.35 45 7.53 Yes 32 1.54 Yes 0 0 No -44 0.47 No 26 42.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 77038896 - NM_001278603 NUP54 1 0.36 0.5 29 5.49 77.69 24 6.21 Yes 35 0.88 Yes 23 0.9 Yes -23 0.79 Yes 47 75.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 77051014 - NM_001278603 NUP54 1 0.18 0.32 14 3.97 84.41 32 6.16 Yes 19 1.35 Yes 0 0 No -31 0.82 Yes 39 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 77051946 - NM_001278603 NUP54 1 0.16 0.21 12 7 81.56 27 6.43 Yes 14 1.21 Yes 25 0.89 Yes -26 0.53 No 44 56.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 77051946 - NM_001278603 NUP54 1 0.16 0.24 13 7 81.56 27 6.43 Yes 14 1.21 Yes 25 0.89 Yes -26 0.53 No 44 56.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 77053868 - NM_001278603 NUP54 1 0.15 0.22 15 2.01 0 27 6.69 Yes 52 0.73 No 0 0 No -29 0.71 Yes 41 67.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 77055512 - NM_001278603 NUP54 1 0.12 0.17 11 -0.33 0 55 7.44 Yes 75 -4.06 No 0 0 No -30 0.6 No 40 54.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 77065446 - NM_001278603 NUP54 1 1949.09 164.44 72 7.28 86.18 27 5.38 No 18 0.44 No 26 0.95 Yes -26 0.91 Yes 44 95.04 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 77066845 - NM_001278603 NUP54 1 0.32 0.31 19 5.09 80.76 26 8.18 Yes 13 1.16 Yes 25 0.94 Yes -25 0.89 Yes 45 94.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 25877064 + NM_001008564 NUP58 1 0.32 0.44 25 10.33 89.75 42 5.21 No 26 1.28 Yes 33 0.73 Yes -41 0.61 No 29 51.93 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 25877239 + NM_001008564 NUP58 1 0.72 0.9 37 10.46 85.25 24 5.19 No 11 1.11 Yes 23 0.96 Yes -23 0.88 Yes 47 94.22 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 25883384 + NM_001008564 NUP58 1 4634.22 198.76 72 12.13 95.73 34 6.01 Yes 21 0.83 Yes 26 0.74 Yes -26 0.56 No 44 54.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 25887760 + NM_001008564 NUP58 1 0.21 0.43 19 2.41 0 14 4.24 No 16 0.62 No 0 0 No -28 0.88 Yes 42 88.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25893446 + NM_001008564 NUP58 1 0.3 0.6 33 3.27 81.95 22 6.36 Yes 9 0.93 Yes 25 0.79 Yes -25 0.78 Yes 45 81.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 25906123 + NM_001008564 NUP58 1 0.08 0.14 8 5.5 73.99 35 6.24 Yes 22 0.83 Yes 0 0 No -34 0.78 Yes 36 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73204598 + NM_024844 NUP85 1 1.32 1.13 44 7.51 86.68 23 5.06 No 63 0.45 No 22 0.89 Yes -23 0.65 No 47 84.51 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 73204631 + NM_024844 NUP85 1 0.27 0.22 15 0.81 0 16 4.36 No 3 -1.76 No 30 0.81 Yes -40 0.81 Yes 30 85.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73206554 + NM_024844 NUP85 1 0.48 0.76 37 5.05 79.66 27 5.11 No 25 0.9 Yes 0 0 No -26 0.58 No 44 57.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73206817 + NM_024844 NUP85 1 0.1 0.15 9 5.81 88.13 32 6.45 Yes 19 0.25 No 0 0 No -28 0.84 Yes 39 69.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 73207542 + NM_024844 NUP85 1 0.1 0.17 11 12.85 95.65 23 6.63 Yes 38 0.98 Yes 0 0 No -22 0.97 Yes 48 96.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73212384 + NM_024844 NUP85 1 0.59 0.56 26 3.01 0 24 9.75 Yes 11 1.26 Yes 23 0.64 Yes -23 0.39 No 47 51.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 73212405 + NM_024844 NUP85 1 0.69 0.65 26 5.41 90.92 28 4.25 No 32 1.27 Yes 27 0.84 Yes -27 0.52 No 43 58.64 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 73214222 + NM_024844 NUP85 1 0.11 0.13 7 5.1 77.46 25 5.21 No 12 0.34 No 0 0 No -25 0.59 No 45 76.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 73214709 + NM_024844 NUP85 1 0.31 0.26 15 4.19 0 33 6.4 Yes 65 0.12 No 0 0 No -33 0.5 No 37 54.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73221218 + NM_024844 NUP85 1 0.41 0.36 19 7.33 90.02 19 5.48 No 66 0.5 No 18 0.49 Yes -18 0.52 No 27 53.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 73221862 + NM_024844 NUP85 1 0.35 0.32 20 4.36 73.79 19 5.32 No 6 0.48 No 0 0 No -18 0.49 No 48 62.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73221892 + NM_024844 NUP85 1 0.53 0.47 26 5.2 78.28 29 6.24 Yes 16 1.47 Yes 0 0 No -28 0.79 Yes 42 79.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73222117 + NM_024844 NUP85 1 0.75 0.82 37 12.4 88.65 22 5.29 No 32 -0.78 No 23 0.91 Yes -26 0.56 No 49 47.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 73222150 + NM_024844 NUP85 1 0.6 0.64 30 -1.05 0 21 3.94 No 8 0.95 Yes 23 0.91 Yes -28 0.89 Yes 42 70.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73222839 + NM_024844 NUP85 1 0.23 0.26 15 10.86 96.14 17 6.39 Yes 4 0.91 Yes 28 0.57 Yes -19 0.28 No 47 42.83 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 73224260 + NM_024844 NUP85 1 1.41 1.58 54 7.86 77.95 30 5.36 No 63 0.86 Yes 0 0 No -25 0.93 Yes 45 88.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73225092 + NM_024844 NUP85 1 2.57 2.86 67 8.48 83.6 32 6 Yes 54 2.28 Yes 31 0.51 Yes -31 0.56 No 39 81.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 73227047 + NM_024844 NUP85 1 0.09 0.1 7 0.16 84.41 22 5.27 No 9 1.28 Yes 0 0 No -21 0.86 Yes 49 86.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73228952 + NM_024844 NUP85 1 0.13 0.18 10 -0.04 0 11 4 No 18 0.97 Yes 0 0 No -30 0.63 No 40 75.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 73229220 + NM_024844 NUP85 1 0.08 0.11 7 -0.75 61.31 31 5.9 Yes 36 0.49 No 0 0 No -30 0.66 Yes 40 71.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73230736 + NM_024844 NUP85 1 0.54 0.64 31 -6.56 0 31 4.8 No 63 1.08 Yes 24 0.67 Yes -26 0.86 Yes 44 94.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 73231210 + NM_024844 NUP85 1 1.28 1.53 49 4.25 86.3 19 4.05 No 1 0.37 No 21 0.61 Yes -22 0.8 Yes 52 34.54 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 5289613 - NM_002532 NUP88 1 0.11 0.18 10 0.3 65.85 25 5.45 No 71 -5.09 No 21 0.77 Yes -25 0.28 No 33 46.55 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 5290377 - NM_002532 NUP88 1 0.25 0.44 24 5.61 77.58 23 4.69 No 10 1.3 Yes 0 0 No -22 0.7 Yes 48 71.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5290410 - NM_002532 NUP88 1 0.09 0.18 9 1.59 72.72 25 5.11 No 70 0.23 No 24 0.9 Yes -24 0.83 Yes 46 65.22 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 5290793 - NM_002532 NUP88 1 0.06 0.11 8 -0.45 0 23 5.1 No 40 -3.06 No 28 0.82 Yes -22 0.91 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 5291273 - NM_002532 NUP88 1 2.01 3.5 65 6.76 89.85 23 4.86 No 10 0.93 Yes 22 0.92 Yes -22 0.86 Yes 48 87.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 5291273 - NM_002532 NUP88 1 0.1 0.18 9 6.76 89.85 23 4.86 No 10 0.93 Yes 22 0.92 Yes -22 0.86 Yes 48 87.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 5292278 - NM_002532 NUP88 1 0.48 1.06 43 -2.64 73.76 17 4.36 No 64 0.9 Yes 0 0 No -25 0.57 No 45 59.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5292308 - NM_002532 NUP88 1 0.14 0.32 16 1.01 71.37 25 4.23 No 34 0.89 Yes 22 0.55 Yes -46 0.41 No 50 51.92 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 5294979 - NM_002532 NUP88 1 0.35 0.78 38 3.56 0 26 7.61 Yes 7 1.15 Yes 0 0 No -25 0.5 No 45 55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5297538 - NM_002532 NUP88 1 0.06 0.13 8 11.51 89.45 37 5.8 Yes 24 1.11 Yes 0 0 No -36 0.85 Yes 34 97.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5299529 - NM_002532 NUP88 1 0.23 0.35 17 6.77 87.11 28 3.85 No 64 1 Yes 0 0 No -27 0.86 Yes 43 86.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5304700 - NM_002532 NUP88 1 0.12 0.17 11 2.72 83.78 29 6.42 Yes 16 1.23 Yes 0 0 No -28 0.37 No 42 72.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 5308448 - NM_002532 NUP88 1 0.14 0.21 12 5.75 65.15 24 8.05 Yes 11 1.37 Yes 0 0 No -23 0.86 Yes 47 85.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5308894 - NM_002532 NUP88 1 0.12 0.18 11 7.83 81.38 32 7.68 Yes 6 0.92 Yes 0 0 No -31 0.48 No 39 68.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5312227 - NM_002532 NUP88 1 1.22 1.79 57 4 82.21 32 5.88 Yes 19 0.33 No 0 0 No -31 0.9 Yes 39 90.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5317400 - NM_002532 NUP88 1 0.1 0.22 11 5.69 74.25 28 5.57 Yes -3 1.2 Yes 0 0 No -27 0.91 Yes 43 94.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5321462 - NM_002532 NUP88 1 0.9 1.24 43 4.31 84.41 31 7.75 Yes 18 0.59 No 33 0.71 Yes -33 0.71 Yes 37 77.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 56775691 + NM_014669 NUP93 1 0.43 0.57 26 11.02 86.09 18 5.57 Yes 5 1.54 Yes 24 0.6 Yes -17 0.66 No 53 83.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 56800087 + NM_014669 NUP93 1 0.07 0.11 7 9.59 91.99 22 5.1 No 9 0.81 Yes 0 0 No -21 0.93 Yes 49 93.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56862535 + NM_014669 NUP93 1 0.25 0.42 20 9.32 90.02 25 5.46 No 12 1.07 Yes 0 0 No -28 0.69 Yes 42 79.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56865855 + NM_014669 NUP93 1 0.67 1.24 50 7.73 80.34 32 5.79 Yes 52 -3.56 No 0 0 No -29 0.86 Yes 41 70.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 56870461 + NM_014669 NUP93 1 0.11 0.26 10 3.89 62.96 28 7.17 Yes 15 1.42 Yes 0 0 No -27 0.9 Yes 43 92.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56870579 + NM_014669 NUP93 1 0.09 0.17 10 2.76 83.78 22 3.79 No 27 0.78 Yes 0 0 No -22 0.72 Yes 48 78.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56872869 + NM_014669 NUP93 1 0.13 0.26 15 3.26 0 9 3.87 No 33 1.68 Yes 0 0 No -32 0.53 No 38 75.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 56875673 + NM_014669 NUP93 1 0.12 0.21 13 6.29 85.87 19 5.44 No 6 0.44 No 0 0 No -24 0.41 No 46 71.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 56875853 + NM_014669 NUP93 1 0.1 0.19 12 7.63 86.69 26 6.48 Yes 63 1.08 Yes 0 0 No -21 0.37 No 45 65.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 56876489 + NM_014669 NUP93 1 0.08 0.17 10 3.88 0 34 6.76 Yes 42 -1.47 No 34 0.53 Yes -33 0.62 No 37 83.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 3697620 - NM_016320 NUP98 1 0.19 0.21 12 3.34 70.01 16 4.67 No 36 1.18 Yes 20 0.93 Yes -48 0.64 No 55 34.59 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 3722047 - NM_016320 NUP98 1 0.1 0.13 8 1.16 68.3 20 4.66 No 7 1.61 Yes 21 0.95 Yes -19 0.58 No 14 62.81 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 3726069 - NM_016320 NUP98 1 8.13 7.28 72 5.3 74.7 24 7.82 Yes 11 0.88 Yes 0 0 No -28 0.67 Yes 42 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 3731556 - NM_016320 NUP98 1 0.19 0.19 12 11.08 83.98 40 5.56 Yes 11 0.94 Yes 0 0 No -28 0.81 Yes 42 55.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 3734039 - NM_016320 NUP98 1 0.16 0.35 18 10.6 88.2 43 4.71 No 45 0.45 No 0 0 No -35 0.93 Yes 35 95.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 3735222 - NM_016320 NUP98 1 0.15 0.26 12 -2.78 0 36 5.51 No 23 0.29 No 0 0 No -23 0.39 No 34 60.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 3744034 - NM_016320 NUP98 1 0.17 0.22 14 1.82 0 40 7.42 Yes 65 1.33 Yes 0 0 No -39 0.97 Yes 31 97.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 3748400 - NM_016320 NUP98 1 0.14 0.32 16 10.22 93.82 18 5.39 No 5 1.98 Yes 0 0 No -22 0.88 Yes 48 82.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 3756712 - NM_016320 NUP98 1 0.28 0.47 23 7.99 91 21 4.79 No 25 0.95 Yes 0 0 No -25 0.9 Yes 45 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 3770852 - NM_016320 NUP98 1 0.22 0.47 22 6.88 81.27 47 5.72 Yes 34 1.44 Yes 0 0 No -29 0.86 Yes 41 62.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 3806982 - NM_016320 NUP98 1 1.23 1.15 47 1 0 35 5.92 Yes 66 -2.56 No 0 0 No -34 0.63 No 36 62.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 3815193 - NM_016320 NUP98 1 3.13 2.89 66 1.83 0 37 5.79 Yes 55 0.37 No 0 0 No -26 0.65 No 34 66.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 3815197 - NM_016320 NUP98 1 0.13 0.13 9 -0.07 83.04 33 5.58 Yes 51 0.37 No 0 0 No -32 0.71 Yes 38 76.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 23224698 + NM_007342 NUPL2 1 0.16 0.14 10 -3.67 0 18 4.34 No 27 0.57 No 0 0 No -43 0.5 No 27 68.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 23224839 + NM_007342 NUPL2 1 0.14 0.13 8 3.9 82.1 23 4.69 No 37 -1.45 No 0 0 No -22 0.79 Yes 33 52.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 23227651 + NM_007342 NUPL2 1 0.24 0.33 16 10.29 83.44 34 5.43 No 8 -0.73 No 26 0.78 Yes -33 0.58 No 37 55.84 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 23232595 + NM_007342 NUPL2 1 0.93 1.26 42 6.18 83.89 9 5.48 No -4 0.84 Yes 0 0 No -23 0.54 No 47 66.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 23235997 + NM_007342 NUPL2 1 1.11 1 42 8.19 90.05 27 6.1 Yes 14 0.09 No 26 0.83 Yes -26 0.6 No 44 58.86 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 23236791 + NM_007342 NUPL2 1 3.74 3.9 69 8.97 83.11 16 3.85 No 38 0.67 No 25 0.51 Yes -25 0.5 No 45 63.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 118010913 + NM_138459 NUS1 1 1.24 1.17 42 4.99 87.11 24 5.82 Yes 11 0.33 No 0 0 No -23 0.91 Yes 47 91.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 118012895 + NM_138459 NUS1 1 0.38 0.43 20 4.62 77.34 29 5.62 Yes 50 0.22 No 0 0 No -28 0.75 Yes 42 73.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 118023460 + NM_138459 NUS1 1 0.02 0.11 7 5.39 80.96 103 6.15 Yes 43 0.83 Yes 0 0 No -34 0.95 Yes 36 94.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41642310 + NM_016359 NUSAP1 1 0.89 2.31 59 5.72 83.44 44 5.42 No 31 1.16 Yes 0 0 No -30 0.61 No 39 73.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41643188 + NM_016359 NUSAP1 1 8.53 23.1 72 4.78 75.31 41 5.15 No 67 1.1 Yes 34 0.49 Yes -40 0.79 Yes 30 69.01 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 41643230 + NM_016359 NUSAP1 1 41.58 112.14 72 4.18 75.6 18 4.16 No -4 0.32 No 22 0.31 Yes -21 0.35 No 48 35.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 41643665 + NM_016359 NUSAP1 1 0.05 0.11 8 10.14 85.98 39 5.95 Yes 26 1.39 Yes 0 0 No -28 0.56 No 42 77.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41644161 + NM_016359 NUSAP1 1 0.37 0.89 41 10.69 88.27 27 5.56 Yes 47 -3.21 No 26 0.83 Yes -24 0.6 No 46 81.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 41652357 + NM_016359 NUSAP1 1 0.14 0.25 13 9.47 86.87 36 5.8 Yes 23 1.1 Yes 0 0 No -35 0.77 Yes 35 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41657602 + NM_016359 NUSAP1 1 105.21 179.51 72 4.09 87.82 21 6.2 Yes 70 1.15 Yes 23 0.51 Yes -26 0.53 No 44 56.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 41657939 + NM_016359 NUSAP1 1 0.61 1.75 56 4.3 84.41 41 7.14 Yes 28 1.86 Yes 30 0.05 Yes -40 0.79 Yes 30 89.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41657963 + NM_016359 NUSAP1 1 0.05 0.18 12 3.83 84.17 22 4.51 No 52 1.84 Yes 0 0 No -26 0.57 No 15 9.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41664428 + NM_016359 NUSAP1 1 0.05 0.17 10 4.88 84.09 24 5.83 Yes -3 0.96 Yes 0 0 No -23 0.91 Yes 47 91.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67902405 + NM_001322041 NUTF2 1 0.06 0.53 27 0.95 76.01 26 6.83 Yes 76 -0.66 No 0 0 No -27 0.79 Yes 45 68.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 67904066 + NM_001322041 NUTF2 1 0.02 0.14 7 7.28 80.26 28 6.16 Yes 44 0.83 Yes 0 0 No -27 0.47 No 43 60.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67905101 + NM_001322041 NUTF2 1 0.03 0.24 13 0.61 58.81 53 7.21 Yes 40 1.2 Yes 0 0 No -48 0.71 Yes 22 70.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89005994 - NR_024397 NUTM2A-AS1 1 2.43 1.6 53 6.59 83.92 33 4.67 No 16 0.77 No 27 0.48 Yes -28 0.6 No 42 75.4 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 89011891 - NR_024397 NUTM2A-AS1 1 0.25 0.14 9 8.44 80.82 26 7.14 Yes 13 1.29 Yes 0 0 No -21 0.43 No 49 52.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89021869 - NR_024397 NUTM2A-AS1 1 0.29 0.17 12 11.66 84.77 35 7.66 Yes 22 2.01 Yes 0 0 No -34 0.56 No 36 59.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89038126 - NR_024397 NUTM2A-AS1 1 0.24 0.11 7 8.23 83.17 22 8.39 Yes 9 1.35 Yes 0 0 No -21 0.63 No 49 74.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89067818 - NR_024397 NUTM2A-AS1 1 17.2 10.51 72 3.06 82.92 48 7.75 Yes 35 1.26 Yes 42 0.14 Yes -47 0.71 Yes 23 78.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 89079957 - NR_024397 NUTM2A-AS1 1 2.4 1.51 50 11.92 90.22 26 7.28 Yes 13 1.74 Yes 26 0.97 Yes -26 0.55 No 45 65.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 89083903 - NR_024397 NUTM2A-AS1 1 1.42 0.9 38 4.23 81.3 23 5 No 75 0.45 No 0 0 No -22 0.96 Yes 48 95.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89083923 - NR_024397 NUTM2A-AS1 1 0.57 0.35 21 0.24 75.6 17 4.8 No 55 0.44 No 20 0.53 Yes -20 0.32 No 54 48.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 89084866 - NR_024397 NUTM2A-AS1 1 2.11 1.32 49 3.78 71.56 34 6.62 Yes 21 0.62 No 24 0.75 Yes -33 0.4 No 33 49.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 89090723 - NR_024397 NUTM2A-AS1 1 0.68 0.74 35 4.02 0 15 4.58 No 64 -6.09 No 20 0.49 Yes -22 0.96 Yes 48 97.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 89090854 - NR_024397 NUTM2A-AS1 1 7.58 8.04 72 7.18 79.75 24 5.18 No 11 0.58 No 23 0.82 Yes -23 0.6 No 47 76.66 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 89094068 - NR_024397 NUTM2A-AS1 1 0.24 0.22 11 10.6 84.79 29 5.55 No 16 1.03 Yes 0 0 No -28 0.88 Yes 42 92.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89094572 - NR_024397 NUTM2A-AS1 1 6.68 6.94 71 9.12 91.39 30 5.34 No 17 0.42 No 30 0.59 Yes -29 0.45 No 41 67.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 81476388 - NR_120613 NUTM2B-AS1 1 3.19 0.39 21 2.99 72.05 43 6.5 Yes 5 0.57 No 0 0 No -23 0.65 No 47 52.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 81483411 - NR_120613 NUTM2B-AS1 1 2.96 0.33 20 10.66 92.63 25 5.39 No 50 0.45 No 0 0 No -24 0.81 Yes 46 90.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 81483769 - NR_120613 NUTM2B-AS1 1 10.77 1.14 41 8.81 94.54 28 3.94 No 2 0.98 Yes 0 0 No -56 0.18 No 18 53.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 81483793 - NR_120613 NUTM2B-AS1 1 4.67 0.49 27 6.59 83.92 33 4.67 No 16 0.77 No 0 0 No -28 0.6 No 42 75.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 81505816 - NR_120613 NUTM2B-AS1 1 3.82 0.38 13 6.44 72.44 25 6.56 Yes 12 1.21 Yes 0 0 No -24 0.89 Yes 46 90.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 81521006 - NR_120613 NUTM2B-AS1 1 1.81 0.18 11 8.79 83.96 42 7.2 Yes 29 2.06 Yes 0 0 No -25 0.71 Yes 45 70.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 81525644 - NR_120613 NUTM2B-AS1 1 2.69 0.31 20 3.59 75.33 20 6.14 Yes 42 1.37 Yes 0 0 No -43 0.84 Yes 27 88.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 81526882 - NR_120613 NUTM2B-AS1 1 0.4 0.15 10 5.01 85.61 22 3.64 No 41 1.28 Yes 0 0 No -21 0.48 No 46 44.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 81544601 - NR_120613 NUTM2B-AS1 1 1.06 0.42 23 5.68 96.41 40 7.21 Yes 27 1.06 Yes 0 0 No -39 0.45 No 31 55.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 81545678 - NR_120613 NUTM2B-AS1 1 1.07 0.39 21 3.06 82.92 46 7.62 Yes 33 1.15 Yes 0 0 No -45 0.69 Yes 25 74.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 81561760 - NR_120613 NUTM2B-AS1 1 4.7 1.65 56 4.23 81.3 23 5 No 75 0.45 No 0 0 No -22 0.96 Yes 48 95.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 81561780 - NR_120613 NUTM2B-AS1 1 1.48 0.56 31 0.24 75.6 17 4.8 No 55 0.45 No 0 0 No -20 0.32 No 54 48.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 81562678 - NR_120613 NUTM2B-AS1 1 0.61 0.22 13 1.04 0 27 6.63 Yes 58 1.1 Yes 0 0 No -26 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 81562715 - NR_120613 NUTM2B-AS1 1 7.18 2.63 64 3.78 71.56 34 7.09 Yes 21 1.1 Yes 0 0 No -33 0.6 No 37 64.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 81568720 - NR_120613 NUTM2B-AS1 1 4.42 3.32 59 7.18 79.75 24 5.18 No 11 0.58 No 23 0.8 Yes -23 0.6 No 47 76.66 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 81571934 - NR_120613 NUTM2B-AS1 1 0.15 0.14 7 10.6 84.79 29 5.55 No 16 1.03 Yes 0 0 No -28 0.88 Yes 42 92.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224416992 - NM_002533 NVL 1 0.42 0.28 14 1.26 0 32 4.09 No 3 -0.74 No 0 0 No -31 0.75 Yes 39 77.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224419885 - NM_002533 NVL 1 0.18 0.1 7 7.28 85.02 27 5.24 No 14 1.63 Yes 22 0.91 Yes -22 0.58 No 44 78.94 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 224420675 - NM_002533 NVL 1 1.42 0.78 32 3.84 85.06 23 4.63 No 62 1.5 Yes 22 0.95 Yes -22 0.94 Yes 48 94.71 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 224423628 - NM_002533 NVL 1 0.66 0.38 20 11.26 98.73 64 7.9 Yes 51 1.87 Yes 0 0 No -45 0.22 No 27 39.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 224455852 - NM_002533 NVL 1 0.56 0.32 19 -3.49 63.52 18 4.27 No -2 0.46 No 22 0.84 Yes -17 0.71 Yes 24 30.54 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 224461204 - NM_002533 NVL 1 3.52 2.13 58 11.04 87.74 32 7.07 Yes 19 2.13 Yes 0 0 No -31 0.94 Yes 39 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224471571 - NM_002533 NVL 1 0.21 0.14 8 4.32 83.12 44 7.65 Yes 12 1.25 Yes 0 0 No -33 0.58 No 37 58.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 224489474 - NM_002533 NVL 1 11.98 6.19 71 6.68 90.11 27 5.39 No 14 0.17 No 26 0.81 Yes -26 0.71 Yes 44 35.39 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 224489474 - NM_002533 NVL 1 0.33 0.18 9 6.68 90.11 27 5.39 No 14 0.17 No 26 0.81 Yes -26 0.71 Yes 44 35.39 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 224489494 - NM_002533 NVL 1 0.84 0.43 25 9.6 88.56 36 7.21 Yes 76 -2.12 No 26 0.81 Yes -45 0.49 No 25 76.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 224495962 - NM_002533 NVL 1 0.59 0.51 25 0.36 0 40 6.98 Yes 27 0.11 No 31 0.34 Yes -28 0.68 Yes 35 50.65 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 224499562 - NM_002533 NVL 1 0.61 0.35 22 2.62 0 25 6.19 Yes 70 0.64 No 27 0.69 Yes -25 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 224500834 - NM_002533 NVL 1 0.21 0.11 8 6.12 84.17 27 5.39 No 57 0.5 No 0 0 No -26 0.63 No 20 65.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 224500854 - NM_002533 NVL 1 6.56 3.51 64 3.42 0 47 6.93 Yes 37 0.5 No 37 0.24 Yes -41 0.49 No 40 67.21 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 224500858 - NM_002533 NVL 1 3.5 1.97 61 2.3 84.41 43 6.63 Yes 33 0.5 No 37 0.24 Yes -37 0.45 No 44 68.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 224501698 - NM_002533 NVL 1 1.11 0.6 27 3.77 0 32 7.02 Yes 49 0.58 No 0 0 No -31 0.93 Yes 39 94.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224501702 - NM_002533 NVL 1 0.73 0.39 22 1.2 83 28 6.74 Yes 45 0.58 No 0 0 No -27 0.94 Yes 43 94.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224505628 - NM_002533 NVL 1 0.93 0.53 28 3.33 0 29 7 Yes 16 1.24 Yes 23 0.57 Yes -28 0.59 No 36 69.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 224505628 - NM_002533 NVL 1 0.6 0.36 17 3.33 0 29 7 Yes 16 1.24 Yes 23 0.57 Yes -28 0.59 No 36 69.88 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 224506520 - NM_002533 NVL 1 0.19 0.11 8 9.73 88.27 24 7.42 Yes 11 1.47 Yes 0 0 No -23 0.93 Yes 47 94.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62561871 - NM_006362 NXF1 1 7.84 7.71 71 2.84 60.72 26 5.26 No 73 0.69 No 25 0.72 Yes -25 0.62 No 45 45.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 62563815 - NM_006362 NXF1 1 0.85 1.22 53 0.18 73.67 35 7.28 Yes 22 1.05 Yes 31 0.85 Yes -34 0.6 No 36 73.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 62564533 - NM_006362 NXF1 1 0.41 0.63 31 8.23 91.39 51 7.06 Yes 38 0.28 No 27 0.04 Yes -50 0.56 No 20 63.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 62567775 - NM_006362 NXF1 1 0.35 0.33 17 3.23 79.74 16 4.46 No 3 0.39 No 0 0 No -20 0.69 Yes 55 69.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 62571661 - NM_006362 NXF1 1 0.41 0.28 13 4.15 77.08 30 5.57 Yes 43 1.84 Yes 32 0.86 Yes -29 0.91 Yes 41 96.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 101501499 + NM_001134456 NXPE3 1 3.77 2 59 -0.08 83.24 31 3.82 No 50 1.24 Yes 34 0.8 Yes -30 0.68 Yes 40 75.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 101504202 + NM_001134456 NXPE3 1 1.12 0.36 10 8.88 75.87 27 6.05 Yes 0 1.79 Yes 25 0.77 Yes -26 0.75 Yes 44 88.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 101508106 + NM_001134456 NXPE3 1 0.84 0.32 18 4.71 86.43 25 4.97 No 54 0.65 No 0 0 No -24 0.57 No 46 62.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 101517501 + NM_001134456 NXPE3 1 0.7 0.25 18 4.82 90.13 27 5.17 No 24 -1.15 No 0 0 No -26 0.61 No 44 35.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 101522488 + NM_001134456 NXPE3 1 1.63 0.74 37 8.32 91.35 34 6.08 Yes 31 1.04 Yes 0 0 No -33 0.64 No 39 66.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 101524928 + NM_001134456 NXPE3 1 2.9 1.39 45 8.1 80.32 32 6.16 Yes 46 0.68 No 0 0 No -31 0.92 Yes 39 93.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 101540481 + NM_001134456 NXPE3 1 0.61 0.24 14 1.23 73.04 25 5.09 No 12 0.95 Yes 0 0 No -24 0.93 Yes 46 89.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 41036693 - NM_001329690 OARD1 1 812.01 52.93 72 5.95 89.63 28 4.98 No 43 1.15 Yes 27 0.57 Yes -24 0.46 No 47 46.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 41037869 - NM_001329690 OARD1 1 0.29 0.24 14 -3.59 0 18 7.5 Yes 5 0.98 Yes 0 0 No -25 0.48 No 36 68.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 113346427 + NM_001320151 OAS1 1 0.2 0.75 30 8.75 88.6 13 4.96 No 26 2.54 Yes 0 0 No -25 0.4 No 49 71.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 113348902 + NM_001320151 OAS1 1 0.08 0.19 14 1.67 62.55 21 6.45 Yes 14 0.4 No 20 0.88 Yes -20 0.62 No 50 54.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 113348840 + NM_001320151 OAS1 1 0.43 1.11 48 -2.63 0 16 3.87 No 3 0.5 No 23 0.84 Yes -15 0.62 No 55 53.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 113348902 + NM_001320151 OAS1 1 3.71 9.32 71 1.67 62.55 21 6.45 Yes 14 0.4 No 20 0.88 Yes -20 0.62 No 50 54.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 113417442 + NM_016817 OAS2 1 0.02 0.1 7 3.28 74.13 23 8.21 Yes 33 1.06 Yes 0 0 No -22 0.39 No 33 74.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 113417523 + NM_016817 OAS2 1 0.2 0.69 30 5.78 75.45 21 5.86 Yes 0 1.68 Yes 0 0 No -20 0.76 Yes 50 54.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 113438641 + NM_016817 OAS2 1 0.05 0.26 17 5.94 84.92 17 5.99 Yes 51 0.87 Yes 0 0 No -20 0.75 Yes 50 78.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113442279 + NM_016817 OAS2 1 0.46 2.06 54 8.54 85.65 29 6.4 Yes 16 0.9 Yes 0 0 No -28 0.67 Yes 42 70.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113444222 + NM_016817 OAS2 1 0.05 0.21 13 -0.42 0 37 6.21 Yes 0 0.55 No 0 0 No -36 0.79 Yes 34 62.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 113379378 + NM_006187 OAS3 1 0.63 0.53 29 -8.25 0 25 5.12 No 68 1.04 Yes 0 0 No -24 0.76 Yes 46 68.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 113379452 + NM_006187 OAS3 1 1.78 1.47 49 2.01 71.92 30 5.22 No 17 1.42 Yes 0 0 No -29 0.76 Yes 41 78.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113384559 + NM_006187 OAS3 1 0.08 0.14 7 4.51 0 17 4.58 No 26 1.04 Yes 0 0 No -16 0.58 No 54 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 113398910 + NM_006187 OAS3 1 0.13 0.19 13 4.49 71.6 28 5.79 Yes 63 -5.09 No 0 0 No -27 0.75 Yes 43 68.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 113401487 + NM_006187 OAS3 1 0.06 0.11 7 6.27 87.43 14 5.08 No 1 1.99 Yes 0 0 No -23 0.8 Yes 47 81.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113402165 + NM_006187 OAS3 1 0.15 0.19 11 7.73 84.43 24 6.23 Yes 11 1.2 Yes 0 0 No -23 0.78 Yes 47 73.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113403701 + NM_006187 OAS3 1 4.3 5.56 67 -1.67 0 21 4.58 No 66 -4.86 No 20 0.59 Yes -20 0.71 Yes 50 37.06 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 113404027 + NM_006187 OAS3 1 0.19 0.25 12 8.02 86.57 33 5.74 Yes -2 0.22 No 0 0 No -32 0.84 Yes 38 83.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 113405280 + NM_006187 OAS3 1 0.14 0.18 9 5.97 75.5 26 5.55 No 65 1.81 Yes 0 0 No -25 0.91 Yes 45 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113406363 + NM_006187 OAS3 1 0.12 0.18 11 7.03 95.43 60 8.76 Yes 47 1.25 Yes 0 0 No -59 0.55 No 11 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 113407444 + NM_006187 OAS3 1 0.89 1.36 48 3.43 75.75 26 6.1 Yes -3 1.28 Yes 0 0 No -25 0.75 Yes 45 62.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2271389 + NM_004152 OAZ1 1 0.6 13.64 72 2.68 0 15 3.87 No 11 1.17 Yes 24 0.32 Yes -23 0.86 Yes 47 90.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2272691 + NM_004152 OAZ1 1 0.04 0.64 34 -14.63 0 16 4 No 16 -1.57 No 20 0.67 Yes -15 0.57 No 55 42.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 2272741 + NM_004152 OAZ1 1 0.16 2.58 67 -0.98 0 12 4.12 No 9 0.71 No 0 0 No -21 0.77 Yes 49 89.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2272752 + NM_004152 OAZ1 1 0.07 1.22 39 -14.47 0 15 4.47 No 20 0.01 No 0 0 No -21 0.91 Yes 49 57.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 2272803 + NM_004152 OAZ1 1 0.08 1.28 50 2.43 77.88 27 6.08 Yes 3 0.01 No 0 0 No -26 0.57 No 44 62.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2273041 + NM_004152 OAZ1 1 0.01 0.38 18 2.61 73.93 28 5.83 Yes 39 0.42 No 0 0 No -27 0.66 No 43 74.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 64983209 - NM_001301302 OAZ2 1 0.12 0.14 9 7.13 90.92 43 6.7 Yes 30 1.16 Yes 30 0.85 Yes -30 0.91 Yes 40 86.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 17337783 + NM_024578 OCEL1 1 4.23 0.43 26 5.92 80.58 39 6.25 Yes -4 -1.15 No 20 0.3 Yes -20 0.47 No 50 65.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 17339239 + NM_024578 OCEL1 1 0.81 0.13 9 5.63 84.17 27 5.39 No 71 0.5 No 26 0.88 Yes -26 0.69 Yes 18 69.52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 17339503 + NM_024578 OCEL1 1 1.25 0.14 9 5.01 75.53 21 6.71 Yes 8 1.35 Yes 0 0 No -20 0.95 Yes 50 90.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48835399 + NM_001168254 OCIAD1 1 0.1 0.38 16 -3.36 0 16 6.11 Yes -2 0.73 No 28 0.8 Yes -25 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 48835423 + NM_001168254 OCIAD1 1 0.04 0.15 8 -5.35 0 12 3.87 No 12 1.07 Yes 0 0 No -35 0.48 No 24 41.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 48835444 + NM_001168254 OCIAD1 1 0.1 0.42 23 5.61 81.42 16 5.47 No 33 1.07 Yes 0 0 No -25 0.23 No 47 32.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 48839176 + NM_001168254 OCIAD1 1 0.04 0.15 7 6.93 80.12 37 6.12 Yes 59 -0.66 No 31 0.33 Yes -33 0.48 No 47 63.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 48850893 + NM_001168254 OCIAD1 1 0.04 0.17 11 1.95 64.4 25 5.02 No 41 1.17 Yes 0 0 No -20 0.49 No 50 52.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 48851836 + NM_001168254 OCIAD1 1 0.29 1.26 49 8.66 86.65 39 5.92 Yes 26 1.11 Yes 0 0 No -33 0.6 No 37 62.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 48851903 + NM_001168254 OCIAD1 1 0.09 0.42 19 7.29 86.33 28 5.85 Yes 37 0.74 No 0 0 No -27 0.59 No 43 72.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 48894907 - NR_104589 OCIAD2 1 1051.87 146.31 72 8.1 84.24 45 6.38 Yes 12 1.47 Yes 24 0.92 Yes -29 0.7 Yes 41 73.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 68815813 + NM_002538 OCLN 1 1.41 0.15 10 1.46 0 32 6.42 Yes 19 0.79 Yes 0 0 No -31 0.57 No 31 49.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 128687212 + NM_001318784 OCRL 1 3.89 0.42 19 8.18 82.8 22 5.29 No 9 0.94 Yes 0 0 No -21 0.79 Yes 49 67.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 128723213 + NM_001318784 OCRL 1 2.55 0.13 8 8.23 92.71 69 7.85 Yes 72 0.26 No 0 0 No -22 0.63 No 48 83.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 10581848 - NM_001287188 ODC1 1 0.08 1.81 58 -6.39 78.63 40 5.47 No 27 0.3 No 0 0 No -35 0.6 No 35 71.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 10583439 - NM_001287188 ODC1 1 0.03 0.29 19 -3.21 0 22 6.71 Yes 9 1.85 Yes 0 0 No -21 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 10585174 - NM_001287188 ODC1 1 0.06 0.97 42 -1.95 76.41 40 6.2 Yes 31 1.06 Yes 0 0 No -30 0.45 No 45 54.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131235216 + NM_153437 ODF2 1 0.2 0.15 10 -2.73 71.9 21 4.9 No 37 0.92 Yes 0 0 No -20 0.68 Yes 21 60.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 131235216 + NM_153437 ODF2 1 0.45 0.44 23 -2.73 71.9 21 4.9 No 37 0.92 Yes 0 0 No -20 0.68 Yes 21 60.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 131236965 + NM_153437 ODF2 1 0.12 0.1 7 4.2 76.4 27 6.71 Yes 38 -2.34 No 0 0 No -26 0.91 Yes 44 56.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 86821067 - NM_001007022 ODF2L 1 5.8 0.54 24 -0.91 0 31 4.92 No 4 0.5 No 25 0.69 Yes -26 0.51 No 44 46.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 86821072 - NM_001007022 ODF2L 1 1.15 0.13 7 3.36 75.67 26 4.5 No -1 0.51 No 25 0.69 Yes -25 0.51 No 49 48.9 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 86836814 - NM_001007022 ODF2L 1 0.59 0.13 9 2.11 74.26 17 4.44 No 0 1.03 Yes 0 0 No -27 0.55 No 41 48.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50969258 - NM_001014440 ODF3B 1 0.65 0.14 9 6.73 82.73 22 3.95 No NA NA NA 26 0.45 Yes -26 0.47 No 24 31.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50969721 - NM_001014440 ODF3B 1 3.26 0.18 11 1.75 0 18 6.39 Yes 5 0.85 Yes 0 0 No -34 0.5 No 37 52.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50969721 - NM_001014440 ODF3B 1 1.41 0.1 7 1.75 0 18 6.39 Yes 5 0.85 Yes 0 0 No -34 0.5 No 37 52.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50970132 - NM_001014440 ODF3B 1 11.46 0.68 34 6.37 81.2 28 7.34 Yes 44 0.51 No 27 0.82 Yes -27 0.95 Yes 43 89.29 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 13754226 + NM_003611 OFD1 1 1.57 1.28 41 7.18 81.14 27 6.91 Yes 40 0.45 No 26 0.67 Yes -26 0.69 Yes 44 55.71 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 13754774 + NM_003611 OFD1 1 1.12 0.86 37 11.86 95.02 21 6.63 Yes 8 1.04 Yes 0 0 No -20 0.91 Yes 50 84.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 13758207 + NM_003611 OFD1 1 2.28 1.18 45 3.58 90.55 28 5.81 Yes 47 0.64 No 27 0.83 Yes -27 0.4 No 42 69.46 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 13763030 + NM_003611 OFD1 1 0.69 0.31 15 7.55 79.78 22 5.5 No 9 1.43 Yes 0 0 No -21 0.66 No 53 68.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 13770822 + NM_003611 OFD1 1 0.35 0.13 8 6 77.39 25 5.92 Yes 74 0.95 Yes 24 0.63 Yes -20 0.63 No 50 60.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 13770822 + NM_003611 OFD1 1 13.58 5.67 70 6 77.39 25 5.92 Yes 74 0.95 Yes 24 0.63 Yes -20 0.63 No 50 60.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 13773275 + NM_003611 OFD1 1 0.21 0.11 8 -3.36 0 9 3.87 No 55 0.35 No 0 0 No -27 0.69 Yes 43 86.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 13775249 + NM_003611 OFD1 1 0.17 0.14 9 10.57 89.43 29 5.92 Yes 16 0.82 Yes 0 0 No -28 0.78 Yes 42 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 13781834 + NM_003611 OFD1 1 0.71 0.39 23 5.77 76.98 41 7.17 Yes 67 0.43 No 24 0.95 Yes -33 0.8 Yes 37 92.97 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 13786175 + NM_003611 OFD1 1 4.5 2.15 60 0.97 75.28 48 7.62 Yes 69 0.16 No 0 0 No -45 0.49 No 23 62.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44653450 + NM_001165036 OGDH 1 0.25 0.36 22 6.63 87.96 29 5.83 Yes 61 0.22 No 0 0 No -28 0.72 Yes 42 57.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 44658422 + NM_001165036 OGDH 1 5.06 7.67 72 8.53 84.19 22 6.05 Yes 9 2.24 Yes 0 0 No -21 0.77 Yes 49 72.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44662404 + NM_001165036 OGDH 1 0.21 0.31 16 8.65 97.05 20 5.03 No 66 0.79 Yes 23 0.66 Yes -23 0.57 No 47 65.47 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44663919 + NM_001165036 OGDH 1 0.57 0.88 40 2.81 0 46 7.29 Yes 33 0.91 Yes 0 0 No -52 0.74 Yes 18 75.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44664314 + NM_001165036 OGDH 1 0.31 1.04 43 2.43 71.69 26 6.61 Yes 76 -4.94 No 0 0 No -25 0.81 Yes 45 84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44687255 + NM_001165036 OGDH 1 0.32 0.24 15 3.36 72.77 99 10.43 Yes 75 1.81 Yes 18 0.73 Yes -18 0.64 No 52 43.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44706246 + NM_001165036 OGDH 1 0.15 0.11 8 -7.43 59.47 34 7.33 Yes -2 0.92 Yes 0 0 No -36 0.54 No 34 87.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 44687255 + NM_001165036 OGDH 1 228.68 163.96 72 3.36 72.77 99 10.43 Yes 75 1.81 Yes 18 0.73 Yes -18 0.64 No 52 43.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44695916 + NM_001165036 OGDH 1 1.59 1.11 43 7.33 83.94 59 9.8 Yes 46 2.23 Yes 28 0.91 Yes -28 0.51 No 42 61.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44714743 + NM_001165036 OGDH 1 0.68 1.36 48 0.78 72.48 37 7.52 Yes 24 1.48 Yes 24 0.95 Yes -36 0.46 No 34 44.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44725659 + NM_001165036 OGDH 1 0.12 0.26 14 7.91 88.76 29 6.46 Yes 16 1.66 Yes 0 0 No -28 0.79 Yes 42 82.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 56487757 + NM_001324358 OGFOD1 1 0.1 0.17 7 5.24 75.7 37 6.69 Yes 6 0.99 Yes 0 0 No -36 0.48 No 28 54.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 56488685 + NM_001324358 OGFOD1 1 0.22 0.43 24 7.05 82.74 33 6.73 Yes 20 1.1 Yes 32 0.64 Yes -32 0.47 No 38 78.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 56492424 + NM_001324358 OGFOD1 1 0.17 0.33 17 6.72 82.81 38 5.41 No 21 1.59 Yes 33 0.73 Yes -37 0.71 Yes 33 81.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 56504502 + NM_001324358 OGFOD1 1 0.46 0.56 30 7.64 85.91 34 6.32 Yes 21 0.9 Yes 0 0 No -33 0.74 Yes 37 76.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123460799 + NM_001304833 OGFOD2 1 3.12 0.78 33 7.62 84.22 24 6.78 Yes 11 1.37 Yes 0 0 No -23 0.87 Yes 47 94.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123461147 + NM_001304833 OGFOD2 1 5.19 1.18 54 4.31 84.92 20 5.1 No 7 0.05 No 33 0.26 Yes -19 0.82 Yes 51 89.39 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 123462527 + NM_001304833 OGFOD2 1 14.18 2.76 59 10.66 92.58 23 5.38 No 10 1.19 Yes 22 0.94 Yes -22 0.94 Yes 48 93.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 123462906 + NM_001304833 OGFOD2 1 46.16 8.61 72 5.89 82.38 16 3.94 No 51 1.11 Yes 24 0.7 Yes -24 0.58 No 46 64.78 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 123463024 + NM_001304833 OGFOD2 1 5.85 1.11 43 7.02 84.24 22 6.08 Yes 53 -0.19 No 0 0 No -21 0.59 No 49 45.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 123463639 + NM_001304833 OGFOD2 1 1.98 0.6 31 -0.1 0 19 4.36 No 67 -4.88 No 0 0 No -27 0.72 Yes 43 79.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80350576 - NR_033265 OGFOD3 1 1.12 0.17 12 9.55 91.3 26 5.66 Yes 13 0.8 Yes 0 0 No -22 0.73 Yes 45 74.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80351321 - NR_033265 OGFOD3 1 8.96 1.49 55 7.72 90.57 43 7.33 Yes 13 0.49 No 0 0 No -25 0.74 Yes 45 64.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80351321 - NR_033265 OGFOD3 1 3.55 0.56 26 7.72 90.57 43 7.33 Yes 13 0.49 No 0 0 No -25 0.74 Yes 45 64.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 80354703 - NR_033265 OGFOD3 1 0.77 0.14 9 4.28 76.36 18 4.49 No 47 2.13 Yes 27 0.39 Yes -43 0.42 No 53 60.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 80358841 - NR_033265 OGFOD3 1 0.41 0.17 9 4.63 76.86 63 7.35 Yes 41 1.38 Yes 0 0 No -21 0.66 No 49 53.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80361865 - NR_033265 OGFOD3 1 2.07 1.43 49 6 69.92 33 5.92 Yes 20 1.64 Yes 32 0.95 Yes -32 0.88 Yes 38 91.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 80365648 - NR_033265 OGFOD3 1 0.38 0.17 10 5.49 89.11 21 4.51 No 75 1 Yes 0 0 No -20 0.88 Yes 50 86.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80367282 - NR_033265 OGFOD3 1 0.42 0.19 12 1.33 0 25 6.66 Yes 61 1.45 Yes 0 0 No -36 0.47 No 34 46.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 61438893 + NM_007346 OGFR 1 1.74 2.15 59 4.45 0 28 9.11 Yes 15 1.77 Yes 0 0 No -27 0.88 Yes 43 90.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61441719 + NM_007346 OGFR 1 0.06 0.11 8 6.58 72.32 35 5.9 Yes 22 1.94 Yes 0 0 No -34 0.75 Yes 36 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61442714 + NM_007346 OGFR 1 0.4 0.47 25 9.43 75.21 30 5.57 Yes 17 0.7 No 0 0 No -29 0.79 Yes 41 80.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 61443587 + NM_007346 OGFR 1 0.08 0.11 8 -1.94 0 14 3.52 No 21 1.8 Yes 0 0 No -33 0.49 No 47 69.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 72003232 + NM_024576 OGFRL1 1 65.31 13.97 72 7.7 84.76 19 5.55 No 6 0.81 Yes 27 0.64 Yes -24 0.64 No 52 71.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 72006348 + NM_024576 OGFRL1 1 0.66 0.31 19 5.88 83.04 12 5.1 No 69 0.85 Yes 23 0.83 Yes -41 0.45 No 51 45.9 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 9792348 + NM_016828 OGG1 1 0.63 0.19 11 4.6 0 31 5.92 Yes 34 0.39 No 30 0.47 Yes -28 0.61 No 42 73.18 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 9798185 + NM_016828 OGG1 1 0.32 0.15 9 5.52 67.68 25 6.32 Yes 12 1.65 Yes 0 0 No -24 0.84 Yes 46 89.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70756057 + NM_181672 OGT 1 11.22 28.29 72 8 82.41 26 6.24 Yes 68 2.16 Yes 26 0.7 Yes -25 0.77 Yes 45 85.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 70756063 + NM_181672 OGT 1 0.11 0.26 16 -4.24 0 9 3.61 No 74 2.16 Yes 0 0 No -31 0.74 Yes 39 81.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70766193 + NM_181672 OGT 1 3.62 3.44 70 3.67 70.58 61 9.56 Yes 48 1.87 Yes 0 0 No -60 0.82 Yes 10 82.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70766196 + NM_181672 OGT 1 0.21 0.21 14 1.5 75.54 64 9.7 Yes 51 1.87 Yes 0 0 No -23 0.87 Yes 21 37.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 70772263 + NM_181672 OGT 1 0.05 0.18 11 4.19 0 33 6.78 Yes 20 1.36 Yes 0 0 No -32 0.85 Yes 38 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 70775861 + NM_181672 OGT 1 0.06 0.14 9 8.93 81.19 34 5.97 Yes 21 0.45 No 0 0 No -34 0.45 No 37 46.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 70775861 + NM_181672 OGT 1 0.35 0.88 36 8.93 81.19 34 5.97 Yes 21 0.45 No 0 0 No -34 0.45 No 37 46.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 70783184 + NM_181672 OGT 1 0.04 0.11 8 -2.53 0 9 3.87 No 14 1.37 Yes 0 0 No -26 0.73 Yes 44 84.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41577488 + NR_026757 OIP5-AS1 1 0.22 0.35 17 8.06 78.86 30 6.63 Yes 17 1.98 Yes 0 0 No -29 0.92 Yes 41 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41580159 + NR_026757 OIP5-AS1 1 0.04 0.13 7 0.85 0 19 6.59 Yes 53 0.88 Yes 23 0.54 Yes -23 0.73 Yes 47 78.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41580180 + NR_026757 OIP5-AS1 1 0.16 0.51 23 5.46 90.14 28 5.29 No 74 0.89 Yes 27 0.84 Yes -27 0.67 Yes 43 59.8 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 41582502 + NR_026757 OIP5-AS1 1 0.31 0.93 37 5.02 80.12 20 5.57 Yes 7 1.07 Yes 19 0.62 Yes -19 0.74 Yes 51 85.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41584240 + NR_026757 OIP5-AS1 1 0.23 0.75 34 2.76 83.24 30 5.49 No 68 0.75 No 0 0 No -29 0.68 Yes 41 77.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41588343 + NR_026757 OIP5-AS1 1 0.06 0.17 11 9.05 79.52 29 5.62 Yes 12 1.27 Yes 0 0 No -28 0.93 Yes 42 95.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41589001 + NR_026757 OIP5-AS1 1 1.45 4.6 71 8.87 90.44 28 7.07 Yes 59 -1.9 No 27 0.67 Yes -27 0.93 Yes 43 88.28 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 41589870 + NR_026757 OIP5-AS1 1 0.09 0.29 18 2.44 82.92 52 6.28 Yes 32 0.87 Yes 0 0 No -44 0.59 No 26 84.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41589944 + NR_026757 OIP5-AS1 1 1.25 4.11 66 6.8 90.94 22 5.17 No 9 1.13 Yes 0 0 No -21 0.96 Yes 49 92.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41590031 + NR_026757 OIP5-AS1 1 0.06 0.17 10 3.3 83.88 17 5.29 No 4 1.04 Yes 0 0 No -27 0.48 No 54 63.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 174943815 - NM_013341 OLA1 1 0.13 0.85 35 -1.09 0 32 5.61 Yes 28 0.25 No 0 0 No -35 0.71 Yes 35 68.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 174943818 - NM_013341 OLA1 1 0.03 0.21 12 -12.38 0 29 5.38 No 25 0.27 No 0 0 No -32 0.73 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 174945912 - NM_013341 OLA1 1 0.1 0.46 25 6.8 97.26 24 5.19 No 75 0.34 No 0 0 No -24 0.8 Yes 46 70.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 174946730 - NM_013341 OLA1 1 0.34 1.72 50 6.35 79.04 29 5.57 Yes 16 0.44 No 0 0 No -28 0.88 Yes 42 88.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 174962444 - NM_013341 OLA1 1 0.1 0.46 24 3.47 0 35 7 Yes 22 1.34 Yes 0 0 No -34 0.97 Yes 36 97.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 174966399 - NM_013341 OLA1 1 0.07 0.33 20 10.75 95.83 27 5.91 Yes 28 2.12 Yes 0 0 No -26 0.74 Yes 44 73.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 174992954 - NM_013341 OLA1 1 0.11 0.5 27 7.61 86.87 27 6.15 Yes 69 1.15 Yes 0 0 No -26 0.87 Yes 44 92.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 174993121 - NM_013341 OLA1 1 0.03 0.17 12 1.44 0 29 6.37 Yes 7 0.15 No 0 0 No -28 0.73 Yes 42 74.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 175000591 - NM_013341 OLA1 1 0.08 0.42 24 6.96 81.08 34 6.66 Yes 21 1.27 Yes 0 0 No -33 0.7 Yes 37 91.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 175002501 - NM_013341 OLA1 1 0.02 0.1 7 7.74 82.99 18 5.66 Yes 5 2.04 Yes 0 0 No -17 0.74 Yes 53 85.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 175009105 - NM_013341 OLA1 1 0.03 0.13 8 7.6 91.56 16 5.95 Yes 27 0.52 No 0 0 No -28 0.41 No 42 34.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 175009653 - NM_013341 OLA1 1 0.14 0.71 26 11.05 98.16 61 7.06 Yes 74 -2.12 No 0 0 No -29 0.25 No 39 37.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 175022593 - NM_013341 OLA1 1 0.06 0.29 20 6.27 91.56 22 5.22 No 68 0.72 No 0 0 No -21 0.58 No 49 57.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 175047228 - NM_013341 OLA1 1 0.33 1.61 59 5.72 90.92 28 5.29 No 47 0.82 Yes 0 0 No -54 0.45 No 16 58.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 175047253 - NM_013341 OLA1 1 0.61 3.04 67 1.63 83 35 6.72 Yes 22 0.83 Yes 0 0 No -29 0.59 No 36 57.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 175068412 - NM_013341 OLA1 1 0.07 0.38 18 5.83 80.67 27 5.39 No 14 0.48 No 0 0 No -26 0.67 Yes 44 81.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 175077636 - NM_013341 OLA1 1 0.05 0.24 15 -0.6 65.45 13 4.82 No 55 0.37 No 0 0 No -25 0.71 Yes 58 47.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 175080856 - NM_013341 OLA1 1 0.03 0.14 9 9.41 87.82 28 6.24 Yes 15 0.22 No 0 0 No -27 0.9 Yes 43 89.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 175087907 - NM_013341 OLA1 1 0.16 0.99 21 0.58 71.77 28 5.18 No 22 0.08 No 24 0.58 Yes -20 0.4 No 50 44.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 102140739 + NR_026762 OLMALINC 1 16.87 2.82 63 5.48 76.65 40 6.67 Yes 27 0.59 No 0 0 No -39 0.49 No 31 64.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 102142184 + NR_026762 OLMALINC 1 26.67 2.25 58 3.89 71.59 22 5.1 No 76 1.49 Yes 0 0 No -21 0.89 Yes 49 92.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 102142294 + NR_026762 OLMALINC 1 1.17 0.14 7 4.81 80.41 18 4.9 No 54 1.57 Yes 0 0 No -21 0.65 No 49 64.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 102147790 + NR_026762 OLMALINC 1 28.87 2.64 58 -1.41 61.49 37 9.31 Yes 32 1.08 Yes 0 0 No -36 0.88 Yes 34 92.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 102147797 + NR_026762 OLMALINC 1 2.37 0.25 14 -11.09 0 15 4 No 39 1.06 Yes 0 0 No -43 0.82 Yes 27 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 58946773 - NM_145243 OMA1 1 0.3 0.29 19 1.97 74.87 32 5.83 Yes 37 0.88 Yes 0 0 No -31 0.89 Yes 39 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 58946798 - NM_145243 OMA1 1 0.28 0.26 16 6.1 78.53 25 6.32 Yes 12 0.89 Yes 0 0 No -24 0.87 Yes 46 87.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 58964983 - NM_145243 OMA1 1 0.14 0.14 7 10.07 88.27 38 7.37 Yes 63 -1.76 No 0 0 No -38 0.71 Yes 32 66.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 58981505 - NM_145243 OMA1 1 0.25 0.32 18 11.56 91.41 27 6.05 Yes 14 0.78 Yes 0 0 No -26 0.83 Yes 44 90.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 58985243 - NM_145243 OMA1 1 0.63 0.68 28 8.18 93.15 23 6.3 Yes 14 1.02 Yes 0 0 No -26 0.72 Yes 44 52.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 58988585 - NM_145243 OMA1 1 1.6 1.94 59 -3.05 60.41 57 8.53 Yes 44 1.43 Yes 0 0 No -56 0.81 Yes 14 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 58988673 - NM_145243 OMA1 1 1.73 2.03 54 6.16 86.85 17 5.33 No 4 0.91 Yes 0 0 No -29 0.86 Yes 41 77.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 58995993 - NM_145243 OMA1 1 2.79 4.38 68 6.56 88.68 37 7.9 Yes 24 0.63 No 0 0 No -36 0.53 No 34 63.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 58995993 - NM_145243 OMA1 1 0.35 0.56 26 6.56 88.68 37 7.9 Yes 24 0.63 No 0 0 No -36 0.53 No 34 63.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 58996362 - NM_145243 OMA1 1 0.75 1.18 48 7.97 76.99 19 6.32 Yes 39 0.16 No 22 0.43 Yes -25 0.61 No 45 87.24 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 58996398 - NM_145243 OMA1 1 0.46 0.71 34 0.25 0 38 6.14 Yes 3 0.15 No 0 0 No -24 0.34 No 39 34.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 58996427 - NM_145243 OMA1 1 0.1 0.17 10 2.52 62.35 32 6.15 Yes 68 -5.53 No 27 0.38 Yes -28 0.55 No 39 59.33 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 58999133 - NM_145243 OMA1 1 0.49 0.67 32 6.38 85.39 23 4.99 No 10 0.76 No 0 0 No -22 0.73 Yes 48 73.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 58999223 - NM_145243 OMA1 1 0.52 0.86 37 9.01 89.77 30 5.16 No 17 0.98 Yes 0 0 No -25 0.54 No 45 77.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 58999994 - NM_145243 OMA1 1 0.35 0.57 32 -5.96 0 20 4.36 No 14 0.52 No 0 0 No -34 0.49 No 36 47.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 59003139 - NM_145243 OMA1 1 0.25 0.33 20 6.76 71.53 30 6.63 Yes 74 0.37 No 0 0 No -30 0.59 No 34 63.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 59008188 - NM_145243 OMA1 1 1.44 0.14 9 5.88 79.03 85 8.96 Yes -2 1.19 Yes 25 0.48 Yes -25 0.74 Yes 45 75.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 193314588 + NM_130831 OPA1 1 0.29 0.32 18 6.76 87.93 17 4.35 No 67 0.62 No 0 0 No -24 0.52 No 46 82.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 193321288 + NM_130831 OPA1 1 2.58 3.1 69 6.37 83.56 24 5.05 No 67 1.04 Yes 26 0.76 Yes -23 0.34 No 47 42.52 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 193349543 + NM_130831 OPA1 1 0.08 0.14 9 8.12 92.52 35 6.66 Yes 13 0.52 No 0 0 No -23 0.64 No 47 72.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 193360536 + NM_130831 OPA1 1 0.12 0.25 13 4.51 84.45 33 7.34 Yes -3 0.69 No 19 0.57 Yes -23 0.81 Yes 47 92.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 193361740 + NM_130831 OPA1 1 0.37 0.6 29 6.26 74.69 32 5.91 Yes 26 0.34 No 27 0.77 Yes -31 0.7 Yes 39 59.59 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 193362457 + NM_130831 OPA1 1 0.23 0.4 17 12.22 86.15 26 6.48 Yes 13 1.83 Yes 0 0 No -25 0.59 No 45 73.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 193386103 + NM_130831 OPA1 1 0.44 0.5 29 11.95 91.97 25 4.69 No 63 0.64 No 28 0.66 Yes -28 0.68 Yes 42 53.64 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 193386122 + NM_130831 OPA1 1 0.16 0.19 12 7.86 90.19 27 5.29 No 45 0.29 No 26 0.69 Yes -26 0.71 Yes 44 79.21 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 193395615 + NM_130831 OPA1 1 0.16 0.19 8 4.62 74.09 27 5.81 Yes 14 0.7 No 0 0 No -26 0.87 Yes 44 92.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46057908 - NM_025136 OPA3 1 1.73 0.82 39 4.83 86.83 18 5.83 Yes 20 -1.81 No 0 0 No -32 0.85 Yes 38 87.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46085925 - NM_025136 OPA3 1 2.06 1.03 40 5.6 76.84 23 6.87 Yes 10 0.68 No 0 0 No -22 0.77 Yes 48 64.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 46087238 - NM_025136 OPA3 1 0.46 0.24 13 6.65 78.75 37 7.39 Yes 16 1.27 Yes 0 0 No -28 0.91 Yes 42 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 241763956 - NM_014322 OPN3 1 8.33 1.54 55 9.28 90.06 25 4.2 No 22 0.88 Yes 0 0 No -34 0.63 No 36 76.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 13143776 + NM_001008211 OPTN 1 1.23 0.14 8 -3.43 0 35 6.23 Yes 6 1.06 Yes 0 0 No -34 0.59 No 36 83.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 13152179 + NM_001008211 OPTN 1 0.83 0.81 39 7.07 85.39 23 5.38 No 28 0.79 Yes 22 0.95 Yes -22 0.88 Yes 48 90.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 13152276 + NM_001008211 OPTN 1 0.18 0.18 11 -4.68 65 30 6.74 Yes 17 1.37 Yes 0 0 No -29 0.76 Yes 41 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13160905 + NM_001008211 OPTN 1 20.44 24.63 72 2.49 78.36 24 5.2 No 37 1.03 Yes 23 0.92 Yes -23 0.61 No 47 70.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 13164863 + NM_001008211 OPTN 1 1.24 1.1 45 5.79 89.28 22 7.25 Yes 9 1.18 Yes 21 0.88 Yes -21 0.89 Yes 49 91.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 13167784 + NM_001008211 OPTN 1 0.07 0.11 8 10.5 91.68 30 7.84 Yes 17 1.69 Yes 0 0 No -29 0.8 Yes 41 94.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 102080250 + NM_001271818 ORAI2 1 1.02 1.57 50 4.76 91.29 26 5.75 Yes 40 0.23 No 0 0 No -26 0.26 No 44 38.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 102082167 + NM_001271818 ORAI2 1 1.3 1.86 57 5.76 77.63 25 6.29 Yes 41 0.19 No 0 0 No -24 0.84 Yes 46 70.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 102085207 + NM_001271818 ORAI2 1 0.08 0.15 7 6.19 82.09 22 5.24 No 9 0.86 Yes 0 0 No -21 0.83 Yes 49 71.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 102091866 + NM_001271818 ORAI2 1 0.14 0.18 12 12.7 86.78 13 5.92 Yes 61 1.67 Yes 0 0 No -29 0.67 Yes 41 44.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 30961017 + NM_152288 ORAI3 1 0.14 0.11 8 5.89 82.31 34 6 Yes 21 0.76 No 18 0.79 Yes -33 0.63 No 52 70.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 30962486 + NM_152288 ORAI3 1 0.39 0.33 16 11.97 94.64 19 6.05 Yes 46 1.27 Yes 0 0 No -22 0.76 Yes 48 73.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 69481178 - NM_153451 ORAOV1 1 0.34 0.1 7 8.96 85.06 27 5.64 Yes 14 1.06 Yes 26 0.93 Yes -26 0.95 Yes 44 96.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 69482778 - NM_153451 ORAOV1 1 1.06 0.29 17 5.69 78.24 34 5.07 No 17 0.7 No 0 0 No -29 0.91 Yes 41 89.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 69485985 - NM_153451 ORAOV1 1 2.83 0.76 40 4.93 73.69 31 4.39 No 49 1.18 Yes 0 0 No -24 0.64 No 46 67.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 69487272 - NM_153451 ORAOV1 1 0.48 0.18 11 8.77 75.93 43 10.4 Yes 30 1.42 Yes 0 0 No -42 0.71 Yes 28 70.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52859419 - NM_004153 ORC1 1 0.69 0.69 32 8.26 88.79 24 6.08 Yes 59 0.64 No 0 0 No -23 0.94 Yes 47 94.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 52860288 - NM_004153 ORC1 1 2.66 2.65 66 13.29 92.14 29 5.57 Yes 63 0.1 No 0 0 No -29 0.74 Yes 41 61.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 52867160 - NM_004153 ORC1 1 0.97 0.75 37 -3.15 78.06 27 6.66 Yes 14 1.66 Yes 0 0 No -26 0.75 Yes 44 83.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52867898 - NM_004153 ORC1 1 13.67 9.9 72 -2.77 72.28 29 5.36 No 16 0.82 Yes 21 0.9 Yes -24 0.65 No 46 65.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 201783690 - NR_033915 ORC2 1 0.43 0.5 26 2.8 67.03 28 5.42 No 23 -3.89 No 0 0 No -27 0.82 Yes 43 89.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 201802659 - NR_033915 ORC2 1 0.24 0.29 16 4.68 83.63 25 5.02 No 42 0.92 Yes 0 0 No -24 0.86 Yes 46 61.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 201805636 - NR_033915 ORC2 1 1.02 1.29 50 12.56 98.74 21 5.42 No 8 0.22 No 0 0 No -27 0.56 No 43 72.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 201807871 - NR_033915 ORC2 1 1.62 1.17 40 6.75 76.22 13 5.1 No 16 0.55 No 0 0 No -28 0.59 No 42 67.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 201811007 - NR_033915 ORC2 1 0.12 0.1 7 2.94 86.28 15 5.29 No 2 0.37 No 0 0 No -24 0.68 Yes 46 59.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 201826900 - NR_033915 ORC2 1 0.24 0.13 9 11.59 96.48 34 5.83 Yes 42 0.58 No 0 0 No -33 0.71 Yes 43 71.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88304244 + NM_181837 ORC3 1 17.44 14.82 72 4.23 68.97 43 6.21 Yes 17 1.72 Yes 29 0.95 Yes -29 0.79 Yes 41 85.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 88304259 + NM_181837 ORC3 1 13.13 11.18 72 3.73 80.61 22 4.9 No 32 1.71 Yes 29 0.95 Yes -21 0.81 Yes 49 82.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 88311503 + NM_181837 ORC3 1 0.18 0.15 10 2.14 86.72 25 6.24 Yes 12 1.83 Yes 0 0 No -24 0.89 Yes 46 91.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88316273 + NM_181837 ORC3 1 0.65 0.5 26 4.24 0 32 5.91 Yes 27 1 Yes 0 0 No -31 0.78 Yes 39 83.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88316456 + NM_181837 ORC3 1 0.32 0.32 15 6.73 81.71 40 6.4 Yes 36 0.07 No 0 0 No -33 0.86 Yes 37 95.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88318816 + NM_181837 ORC3 1 2.61 3.38 68 -6.14 57.82 32 5.98 Yes 19 1.33 Yes 0 0 No -38 0.75 Yes 32 86.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88322353 + NM_181837 ORC3 1 0.14 0.25 16 2.23 81.96 21 7.51 Yes 31 1.67 Yes 0 0 No -37 0.42 No 33 85.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 88331101 + NM_181837 ORC3 1 0.09 0.15 10 2.47 88.2 20 4.84 No 31 0.6 No 0 0 No -22 0.75 Yes 48 75.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88331644 + NM_181837 ORC3 1 0.28 0.32 16 2.91 0 16 6.19 Yes 11 0.91 Yes 25 0.73 Yes -23 0.66 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 88344661 + NM_181837 ORC3 1 0.13 0.15 9 5.8 74.79 19 5.02 No 6 1.17 Yes 0 0 No -26 0.91 Yes 44 91.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88353476 + NM_181837 ORC3 1 1.61 1.28 47 6.35 83.73 33 5.66 Yes 20 0.85 Yes 0 0 No -32 0.79 Yes 38 76.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88360890 + NM_181837 ORC3 1 0.46 0.36 19 3.49 72.22 32 7.1 Yes 19 1.25 Yes 31 0.34 Yes -39 0.51 No 39 65.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 88363967 + NM_181837 ORC3 1 0.3 0.13 9 9.35 77.42 43 5.61 Yes 30 -1.67 No 0 0 No -26 0.79 Yes 44 79.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88366623 + NM_181837 ORC3 1 108.17 41.18 72 2.23 71.33 29 7.48 Yes 36 0.83 Yes 29 0.76 Yes -32 0.79 Yes 38 89.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 88371255 + NM_181837 ORC3 1 0.31 0.39 23 10.35 88.04 31 6.9 Yes 18 0.74 No 0 0 No -30 0.53 No 40 51.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 88376728 + NM_181837 ORC3 1 6.12 6.43 71 1.67 76.59 18 4.9 No 35 0.76 No 30 0.16 Yes -23 0.48 No 63 30.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 148694585 - NM_181742 ORC4 1 2.64 4.07 68 4.74 84.41 28 5.64 Yes 67 1.31 Yes 28 0.7 Yes -28 0.85 Yes 42 85.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 148695775 - NM_181742 ORC4 1 0.12 0.15 9 -5.54 0 11 3.87 No 50 2.13 Yes 27 0.66 Yes -33 0.58 No 38 62.92 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 148695954 - NM_181742 ORC4 1 0.34 0.32 16 -0.6 0 17 4.24 No 23 1.2 Yes 0 0 No -35 0.78 Yes 35 92.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 148705707 - NM_181742 ORC4 1 1.37 1.65 55 7.45 86.81 25 5.65 Yes 29 0.54 No 0 0 No -25 0.79 Yes 45 85.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 148715965 - NM_181742 ORC4 1 0.1 0.17 9 -4.51 0 26 5.25 No 67 0.6 No 31 0.67 Yes -25 0.62 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 148717876 - NM_181742 ORC4 1 2.47 2.17 61 7.47 88.07 19 4.84 No 31 1.34 Yes 0 0 No -26 0.91 Yes 44 90.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 103807249 - NM_002553 ORC5 1 1.61 1.64 54 4.07 76.68 32 6.66 Yes 30 0.89 Yes 0 0 No -31 0.83 Yes 39 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 103823556 - NM_002553 ORC5 1 0.1 0.13 8 5.5 90.92 28 5.29 No 47 -1.44 No 0 0 No -27 0.86 Yes 43 78.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 103824910 - NM_002553 ORC5 1 0.16 0.22 15 7.45 84.11 28 5.38 No 2 0.63 No 27 0.77 Yes -28 0.3 No 43 36.15 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 103828416 - NM_002553 ORC5 1 1.72 2.31 60 9.83 90.13 30 6.72 Yes 17 1.32 Yes 29 0.95 Yes -29 0.94 Yes 41 93.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 103828852 - NM_002553 ORC5 1 0.11 0.19 12 1.23 66.21 29 5.65 Yes 47 0.64 No 25 0.43 Yes -28 0.67 Yes 42 46.1 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 103842993 - NM_002553 ORC5 1 0.06 0.1 7 6.5 88.49 42 4.56 No 20 0.39 No 22 0.46 Yes -28 0.58 No 42 60.72 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 103844681 - NM_002553 ORC5 1 0.18 0.13 7 -0.22 79.66 26 6.16 Yes 13 1.09 Yes 0 0 No -25 0.85 Yes 45 87.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 103844710 - NM_002553 ORC5 1 0.22 0.17 9 7.3 87.56 33 5.9 Yes 17 0.5 No 23 0.87 Yes -32 0.75 Yes 38 64.08 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 46728759 + NR_037620 ORC6 1 0.17 0.19 11 7.85 92.4 27 5.49 No 14 1 Yes 0 0 No -26 0.8 Yes 44 77.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 46728850 + NR_037620 ORC6 1 0.36 0.44 21 3.73 78.97 26 7 Yes 28 1.14 Yes 23 0.92 Yes -25 0.83 Yes 45 86.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 46729931 + NR_037620 ORC6 1 0.58 0.9 38 -14.82 66.8 26 6.13 Yes 72 1.06 Yes 0 0 No -25 0.91 Yes 45 83.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 46731370 + NR_037620 ORC6 1 0.05 0.1 7 -14.69 0 17 3.87 No 1 0.4 No 0 0 No -28 0.51 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190636627 - NM_016467 ORMDL1 1 0.08 0.29 16 -13.92 0 50 7.64 Yes 6 1.04 Yes 0 0 No -29 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190638841 - NM_016467 ORMDL1 1 0.15 0.5 23 3.45 83.26 22 7.31 Yes 50 -5.08 No 0 0 No -21 0.5 No 49 66.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190647519 - NM_016467 ORMDL1 1 0.24 0.28 16 2.54 75.52 24 4.99 No 38 1.16 Yes 0 0 No -23 0.72 Yes 47 72.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56212874 + NM_014182 ORMDL2 1 1.92 2.51 64 4.18 77.7 33 4.66 No 76 -5.67 No 28 0.71 Yes -28 0.63 No 51 36.97 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56212914 + NM_014182 ORMDL2 1 0.09 0.11 8 4.38 83.13 18 4.9 No 5 0.94 Yes 0 0 No -21 0.71 Yes 49 65.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 38080471 - NM_001320802 ORMDL3 1 7.16 1.19 49 -6.32 0 12 4.12 No 17 1.69 Yes 26 0.95 Yes -29 0.84 Yes 41 86.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 38080479 - NM_001320802 ORMDL3 1 416.03 69.85 72 9.76 88.67 22 6.13 Yes 9 1.73 Yes 21 0.96 Yes -21 0.86 Yes 49 83.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58088488 + NM_001261420 OS9 1 0.07 0.21 12 4.54 79.77 33 6 Yes 39 1.49 Yes 32 0.61 Yes -32 0.87 Yes 38 75.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58089325 + NM_001261420 OS9 1 0.14 0.46 22 4.59 73.01 25 4 No 39 0.56 No 24 0.51 Yes -21 0.53 No 49 72.52 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 58109874 + NM_001261420 OS9 1 259.71 155.56 72 5.5 81.33 23 6.85 Yes 47 -2.01 No 24 0.1 Yes -17 0.52 No 53 66.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 58110164 + NM_001261420 OS9 1 0.2 0.46 27 9.05 80.38 15 7.31 Yes 2 1.77 Yes 32 0.68 Yes -33 0.58 No 37 83.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 58110481 + NM_001261420 OS9 1 0.18 0.49 27 -0.63 0 9 3.87 No 18 1.25 Yes 21 0.69 Yes -37 0.72 Yes 33 79.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58113881 + NM_001261420 OS9 1 111.77 166.47 72 6.71 73.84 54 6.63 Yes 41 2.11 Yes 42 0.72 Yes -42 0.87 Yes 28 95.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 58113883 + NM_001261420 OS9 1 0.18 0.28 18 -1.58 75.11 56 6.76 Yes 43 2.1 Yes 0 0 No -44 0.87 Yes 26 94.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 59349225 - NM_002556 OSBP 1 0.12 0.19 12 5.81 84.97 24 3.45 No 62 -3 No 0 0 No -26 0.76 Yes 44 69.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125263587 - NM_022776 OSBPL11 1 0.35 0.29 16 6.18 74.73 59 7.95 Yes 0 0.69 No 0 0 No -23 0.54 No 47 35.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 125268457 - NM_022776 OSBPL11 1 0.81 0.32 19 6.18 88.32 34 8.76 Yes 21 0.4 No 0 0 No -33 0.92 Yes 37 88.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125279361 - NM_022776 OSBPL11 1 1.16 0.85 36 -13.14 67.97 37 6 Yes 66 1.35 Yes 0 0 No -29 0.58 No 41 62.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 125286278 - NM_022776 OSBPL11 1 0.99 0.83 35 8.56 87.02 21 7.48 Yes 8 1.31 Yes 0 0 No -25 0.5 No 50 47.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 125286479 - NM_022776 OSBPL11 1 0.38 0.28 15 6.93 85.08 33 7.39 Yes 52 -4.65 No 21 0.58 Yes -25 0.52 No 38 39.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 125313295 - NM_022776 OSBPL11 1 4.97 1.28 49 8.72 89.07 35 4.95 No 54 1.3 Yes 0 0 No -25 0.6 No 45 66.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 60817376 + NM_001278649 OSBPL2 1 2.31 0.75 36 11.83 92.64 34 7.33 Yes 21 0.67 No 0 0 No -22 0.61 No 48 74.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 60854217 + NM_001278649 OSBPL2 1 1.23 0.36 19 -3.64 0 37 7.65 Yes 24 1.59 Yes 0 0 No -36 0.84 Yes 34 84.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60855064 + NM_001278649 OSBPL2 1 0.38 0.14 9 4.75 75.77 18 5.01 No 5 1.06 Yes 23 0.91 Yes -29 0.63 No 47 64.57 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 60860591 + NM_001278649 OSBPL2 1 0.94 0.38 24 7.28 93.27 28 5.2 No 51 0.16 No 0 0 No -20 0.65 No 50 81.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 24863394 - NR_104111 OSBPL3 1 0.59 0.4 22 5.06 74.42 29 5.44 No 52 1.03 Yes 0 0 No -28 0.88 Yes 42 94.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 24872255 - NR_104111 OSBPL3 1 11.71 1.56 55 8.39 86.82 30 5.48 No 73 0.3 No 0 0 No -27 0.46 No 43 62.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 24876226 - NR_104111 OSBPL3 1 1.23 0.96 37 2.51 79.22 22 5.1 No 37 -2.53 No 0 0 No -26 0.57 No 44 42.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 24887824 - NR_104111 OSBPL3 1 0.22 0.17 9 11.99 91 36 5.39 No 30 0.72 No 0 0 No -35 0.64 No 35 63.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 24889556 - NR_104111 OSBPL3 1 0.71 0.49 24 2.58 0 29 7 Yes 67 0.34 No 0 0 No -28 0.73 Yes 31 75.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 24890110 - NR_104111 OSBPL3 1 0.22 0.15 10 6.93 88.03 34 5.89 Yes 21 -1.18 No 0 0 No -21 0.59 No 49 63.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 24890193 - NR_104111 OSBPL3 1 0.19 0.14 9 6.15 88 18 6.04 Yes 57 0.83 Yes 0 0 No -32 0.67 Yes 38 61.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 24892238 - NR_104111 OSBPL3 1 5.75 4.69 70 6.47 82.87 14 5 No 19 0.76 No 0 0 No -47 0.26 No 23 54.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 24902925 - NR_104111 OSBPL3 1 0.34 0.14 10 2.89 0 23 8.7 Yes 50 0.09 No 35 0.84 Yes -22 0.85 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 24905080 - NR_104111 OSBPL3 1 0.62 0.76 33 -5.23 0 94 8.63 Yes 52 0.03 No 0 0 No -34 0.66 Yes 36 67.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 24910461 - NR_104111 OSBPL3 1 0.31 0.29 15 -1.2 0 26 6 Yes 45 0.83 Yes 0 0 No -25 0.88 Yes 45 85.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 24910488 - NR_104111 OSBPL3 1 0.13 0.11 8 0.84 65.81 31 6.69 Yes 18 0.84 Yes 21 0.84 Yes -30 0.67 Yes 40 79.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 24911684 - NR_104111 OSBPL3 1 0.58 0.44 25 -2.62 0 30 6.62 Yes 69 1.28 Yes 0 0 No -29 0.62 No 41 78.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 24918319 - NR_104111 OSBPL3 1 0.36 0.25 13 4.09 81.01 37 8.42 Yes 24 1.18 Yes 0 0 No -36 0.81 Yes 34 91.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 24926512 - NR_104111 OSBPL3 1 6.6 5.1 62 7.27 89.55 33 5.77 Yes 59 -4.09 No 0 0 No -23 0.9 Yes 47 95.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 24931232 - NR_104111 OSBPL3 1 1.2 0.86 33 5.7 83.68 26 6.56 Yes 71 0.79 Yes 0 0 No -25 0.65 No 45 55.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 24931235 - NR_104111 OSBPL3 1 6.06 4.32 67 6.47 85.56 23 6.35 Yes 68 0.79 Yes 0 0 No -22 0.62 No 42 59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 45885075 - NM_145798 OSBPL7 1 3.54 0.39 20 3.19 70.23 60 5.67 Yes 6 0.73 No 0 0 No -18 0.76 Yes 52 85.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 45886313 - NM_145798 OSBPL7 1 3.15 0.57 31 1.5 76.74 24 4.43 No 28 0.73 No 23 0.57 Yes -26 0.58 No 44 36.03 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 45892074 - NM_145798 OSBPL7 1 5.07 0.58 24 7.51 76.98 41 6.15 Yes 62 -1.49 No 24 0.67 Yes -24 0.66 No 46 78.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 45894082 - NM_145798 OSBPL7 1 0.69 0.14 9 -1.7 75.73 20 4.8 No 7 0.24 No 22 0.85 Yes -19 0.74 Yes 50 69.26 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 76786529 - NM_001319655 OSBPL8 1 0.36 0.29 17 1.42 0 25 5.19 No 9 0.26 No 0 0 No -24 0.93 Yes 46 94.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 76788040 - NM_001319655 OSBPL8 1 0.17 0.14 8 2.49 83.69 42 6.15 Yes 45 0.91 Yes 0 0 No -31 0.78 Yes 39 86.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 76798009 - NM_001319655 OSBPL8 1 0.2 0.25 15 8.91 96.49 30 5.57 Yes 17 0.84 Yes 0 0 No -29 0.79 Yes 41 81.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52215173 + NM_001330580 OSBPL9 1 0.07 0.24 12 7.33 85.67 24 5.92 Yes 11 1.15 Yes 23 0.87 Yes -23 0.89 Yes 47 91.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 52215858 + NM_001330580 OSBPL9 1 0.05 0.15 10 8.4 87.53 24 6.24 Yes 53 0.57 No 0 0 No -23 0.36 No 47 60.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52215173 + NM_001330580 OSBPL9 1 0.93 2.76 65 7.33 85.67 24 5.92 Yes 11 1.15 Yes 23 0.87 Yes -23 0.89 Yes 47 91.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 52217145 + NM_001330580 OSBPL9 1 0.39 0.65 35 11.27 83.17 23 7.08 Yes 10 1.03 Yes 0 0 No -22 0.7 Yes 48 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 52218174 + NM_001330580 OSBPL9 1 0.52 0.89 38 8 72.98 48 7.18 Yes 2 1.42 Yes 26 0.7 Yes -26 0.52 No 32 61.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 52218766 + NM_001330580 OSBPL9 1 0.17 0.29 19 4.19 84.6 28 6.48 Yes 53 1.53 Yes 0 0 No -27 0.64 No 43 81.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 52221192 + NM_001330580 OSBPL9 1 0.27 0.43 24 5.94 95.49 27 4.65 No 7 0.23 No 0 0 No -19 0.51 No 44 66.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52221236 + NM_001330580 OSBPL9 1 0.07 0.11 7 2.72 69.46 35 7.05 Yes 22 0.93 Yes 0 0 No -34 0.62 No 43 64.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 52222072 + NM_001330580 OSBPL9 1 0.49 0.63 37 9.44 91.05 46 4.06 No 16 1.16 Yes 0 0 No -33 0.55 No 37 61.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 52225188 + NM_001330580 OSBPL9 1 0.44 0.56 28 10.07 83.06 16 5.83 Yes 3 0.43 No 29 0.48 Yes -20 0.5 No 41 72.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 52226337 + NM_001330580 OSBPL9 1 0.09 0.13 8 0.76 61.01 25 5.09 No 56 -4.1 No 24 0.69 Yes -12 0.37 No 59 36.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52222452 + NM_001330580 OSBPL9 1 0.22 0.29 13 8.98 85.23 29 5.46 No 34 0.88 Yes 0 0 No -28 0.93 Yes 42 94.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52222612 + NM_001330580 OSBPL9 1 0.12 0.15 9 4.55 69.74 72 9.16 Yes 48 2.39 Yes 35 0.78 Yes -43 0.77 Yes 27 73.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 52223889 + NM_001330580 OSBPL9 1 0.16 0.21 13 3.77 76.15 18 5.09 No 5 0.9 Yes 0 0 No -29 0.65 No 41 72.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 52225188 + NM_001330580 OSBPL9 1 0.5 0.63 33 10.07 83.06 16 5.83 Yes 3 0.43 No 29 0.48 Yes -20 0.5 No 41 72.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 52226337 + NM_001330580 OSBPL9 1 0.43 0.54 29 0.76 61.01 25 5.09 No 56 -4.1 No 24 0.69 Yes -12 0.37 No 59 36.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52226380 + NM_001330580 OSBPL9 1 0.12 0.14 10 5.39 76.39 27 4.96 No -3 0.11 No 0 0 No -21 0.37 No 20 52.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52231497 + NM_001330580 OSBPL9 1 0.05 0.18 11 1.06 0 42 7.6 Yes 57 1.65 Yes 0 0 No -24 0.58 No 29 69.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 52238852 + NM_001330580 OSBPL9 1 0.09 0.14 8 8.44 89.75 27 5.4 No 3 1.65 Yes 0 0 No -26 0.83 Yes 44 72.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52246841 + NM_001330580 OSBPL9 1 0.07 0.17 11 -1.38 0 15 3.87 No 17 0.7 No 0 0 No -29 0.7 Yes 41 74.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 52247259 + NM_001330580 OSBPL9 1 0.31 0.85 33 8.7 91.48 23 5.68 Yes 10 0.27 No 25 0.43 Yes -23 0.57 No 47 60.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52252967 + NM_001330580 OSBPL9 1 0.03 0.11 8 6.05 84.66 23 4.24 No 76 -4.87 No 0 0 No -33 0.71 Yes 37 53.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 52253001 + NM_001330580 OSBPL9 1 0.04 0.17 10 4.39 72.34 18 5.65 Yes 76 -4.58 No 25 0.74 Yes -25 0.85 Yes 45 88.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 42825916 - NM_016470 OSER1 1 0.16 0.14 10 6.32 95.19 25 4.9 No 70 -3.18 No 0 0 No -22 0.74 Yes 48 56.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 42835630 - NM_016470 OSER1 1 0.15 0.13 9 2.4 0 12 4.24 No 55 1.74 Yes 0 0 No -28 0.88 Yes 42 94.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 20915710 - NM_017807 OSGEP 1 0.21 0.28 18 6.47 80.76 16 5.04 No 3 0.62 No 32 0.76 Yes -21 0.54 No 49 68.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 20917461 - NM_017807 OSGEP 1 0.53 0.57 30 6.02 87.34 14 5.35 No 35 1.06 Yes 24 0.59 Yes -47 0.33 No 17 30.77 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 20917481 - NM_017807 OSGEP 1 0.11 0.13 9 5.41 79.38 28 7.02 Yes 15 1.07 Yes 24 0.59 Yes -27 0.72 Yes 37 70.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 20919596 - NM_017807 OSGEP 1 0.1 0.14 7 -1.17 67.3 14 5 No 22 -2.93 No 0 0 No -43 0.59 No 27 54.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 20919612 - NM_017807 OSGEP 1 3.39 3.93 71 4.68 76.36 28 7.49 Yes 70 -2.86 No 27 0.72 Yes -27 0.72 Yes 43 69.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 190620282 - NM_022353 OSGEPL1 1 2.58 0.57 31 7.08 0 68 7.68 Yes 55 0.95 Yes 0 0 No -30 0.8 Yes 40 76.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90921841 + NM_001126111 OSGIN2 1 0.77 0.21 10 3.36 80.57 25 5 No 74 1.43 Yes 0 0 No -24 0.84 Yes 46 88.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90926346 + NM_001126111 OSGIN2 1 0.46 0.65 32 7.46 86.55 30 6 Yes 62 1.63 Yes 0 0 No -29 0.85 Yes 41 87.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27293582 - NM_001134693 OST4 1 0.02 0.42 23 2.77 0 11 4.12 No 24 0.98 Yes 0 0 No -36 0.89 Yes 34 96.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27293611 - NM_001134693 OST4 1 0.02 0.33 18 6.98 92.21 21 5.1 No 39 -1.9 No 19 0.64 Yes -19 0.85 Yes 51 85.6 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 27294350 - NM_001134693 OST4 1 0.02 0.29 16 -7.03 0 15 4.58 No NA NA NA 20 0.89 Yes -14 0.27 No 43 27.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 77712132 + NM_012383 OSTF1 1 0.05 0.11 7 10.15 90.96 67 7.51 Yes 4 0.8 Yes 0 0 No -26 0.61 No 44 86.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 77741392 + NM_012383 OSTF1 1 0.13 0.35 21 5.37 85.18 25 9.53 Yes 12 1.28 Yes 0 0 No -24 0.93 Yes 46 95.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 77742488 + NM_012383 OSTF1 1 0.1 0.24 15 5.55 0 36 5.88 Yes 13 0.19 No 0 0 No -25 0.49 No 37 57.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 77740050 + NM_012383 OSTF1 1 0.1 0.26 16 10.87 91.36 35 8 Yes 22 2.4 Yes 0 0 No -34 0.87 Yes 36 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 77741392 + NM_012383 OSTF1 1 0.25 0.67 30 5.37 85.18 25 9.53 Yes 12 1.28 Yes 0 0 No -24 0.93 Yes 46 95.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 77742488 + NM_012383 OSTF1 1 0.09 0.24 13 5.55 0 36 5.88 Yes 13 0.19 No 0 0 No -25 0.49 No 37 57.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 77749263 + NM_012383 OSTF1 1 0.06 0.14 8 -11.7 0 31 5.71 Yes 31 1.2 Yes 0 0 No -31 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 77761604 + NM_012383 OSTF1 1 0.07 0.14 8 2.39 0 9 3.87 No 33 0.96 Yes 0 0 No -45 0.63 No 25 83.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 108370772 - NM_014028 OSTM1 1 0.28 0.31 19 6.44 93.59 23 5 No 21 1.21 Yes 0 0 No -22 0.8 Yes 48 69.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 108370788 - NM_014028 OSTM1 1 1.61 1.49 46 6.94 81.25 18 7.89 Yes 5 1.21 Yes 21 0.54 Yes -21 0.55 No 49 49.99 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 108395003 - NM_014028 OSTM1 1 0.31 0.13 8 5.34 84.77 33 6.68 Yes 12 0.82 Yes 24 0.92 Yes -32 0.65 No 38 68.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 63755810 + NR_003089 OTUB1 1 0.03 0.11 7 -14.42 0 29 6.93 Yes 16 1.41 Yes 0 0 No -28 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 63756098 + NR_003089 OTUB1 1 0.3 0.99 45 8.66 80.85 19 6 Yes 52 1.2 Yes 25 0.68 Yes -25 0.57 No 41 62.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 63756137 + NR_003089 OTUB1 1 0.04 0.13 8 2.75 0 15 4.58 No 45 0.77 No 0 0 No -33 0.8 Yes 37 82.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 63757758 + NR_003089 OTUB1 1 0.11 0.5 26 8.59 78.93 17 5.24 No 4 0.63 No 23 0.53 Yes -33 0.71 Yes 37 62.07 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 63764542 + NR_003089 OTUB1 1 0.06 0.29 18 2.73 75.35 19 5.48 No 71 0.92 Yes 23 0.55 Yes -51 0.61 No 19 69.15 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 63764823 + NR_003089 OTUB1 1 0.02 0.11 7 -10.18 68.93 23 6.08 Yes 10 0.58 No 0 0 No -22 0.93 Yes 48 80.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 63764877 + NR_003089 OTUB1 1 0.07 0.33 20 4.44 79.16 30 5.15 No 64 -2.83 No 0 0 No -24 0.58 No 46 62.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 20218577 + NM_015207 OTUD3 1 10.88 0.99 41 6.15 81.25 33 4.31 No 51 0.54 No 0 0 No -26 0.7 Yes 44 72.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 146063484 - NM_001102653 OTUD4 1 3.43 2.58 67 -0.23 71.39 50 7.96 Yes 37 2.01 Yes 0 0 No -49 0.58 No 21 86.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 146076836 - NM_001102653 OTUD4 1 19.95 12.56 72 5.38 84.08 28 6.3 Yes 2 1.7 Yes 24 0.88 Yes -27 0.8 Yes 43 85.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 146076991 - NM_001102653 OTUD4 1 0.76 0.46 24 6.63 76.78 30 5.51 No 25 0.76 No 30 0.83 Yes -30 0.49 No 29 44.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 146092470 - NM_001102653 OTUD4 1 0.49 0.38 22 6.22 88.76 24 4.98 No 11 0.71 No 23 0.85 Yes -23 0.8 Yes 47 71.47 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 146092866 - NM_001102653 OTUD4 1 0.81 0.39 21 0.18 0 11 4 No 48 1.25 Yes 19 0.89 Yes -26 0.91 Yes 44 94.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 146095068 - NM_001102653 OTUD4 1 0.42 0.19 11 8.04 99.45 20 4.9 No 34 1.44 Yes 0 0 No -19 0.86 Yes 51 92.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48780576 - NM_017602 OTUD5 1 18.37 14.9 72 6.04 83.27 40 6.02 Yes 27 1.01 Yes 32 0.7 Yes -26 0.78 Yes 44 81.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48782387 - NM_017602 OTUD5 1 0.09 0.13 7 3.25 80.12 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.73 Yes 50 86.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48782390 - NM_017602 OTUD5 1 0.25 0.32 20 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -30 0.43 No 53 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 48793627 - NM_017602 OTUD5 1 0.12 0.14 9 -4.84 0 9 3.87 No 27 -2.76 No 24 0.8 Yes -28 0.24 No 42 31.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 48793630 - NM_017602 OTUD5 1 1.69 1.96 61 -4.3 63.47 29 3.81 No 24 -2.57 No 24 0.31 Yes -25 0.32 No 45 38.68 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 48801542 - NM_017602 OTUD5 1 2.53 2.47 66 7.77 88.49 25 7 Yes 12 2.51 Yes 0 0 No -24 0.79 Yes 46 89.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48811982 - NM_017602 OTUD5 1 1.09 1.07 44 8.22 98.73 21 4.9 No 66 1.95 Yes 0 0 No -20 0.95 Yes 50 92.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 92086062 + NM_001286745 OTUD6B 1 1.54 1.54 52 4.29 0 33 6.34 Yes 12 1.53 Yes 0 0 No -32 0.48 No 38 64.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 92092899 + NM_001286745 OTUD6B 1 0.36 0.4 18 -1.16 65.46 19 5.34 No 6 2.08 Yes 0 0 No -32 0.54 No 38 72.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 92095004 + NM_001286745 OTUD6B 1 0.41 0.58 26 9.91 92.91 39 7.42 Yes 26 0.72 No 0 0 No -38 0.78 Yes 32 89.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 149916983 - NM_020205 OTUD7B 1 0.18 0.13 9 0.46 69.98 12 5.53 No -1 0.06 No 23 0.85 Yes -25 0.58 No 59 44.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 149939313 - NM_020205 OTUD7B 1 4.71 2.5 63 7.9 87.43 36 6.43 Yes 23 -0.18 No 23 0.31 Yes -23 0.71 Yes 47 69.82 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 149949471 - NM_020205 OTUD7B 1 0.58 0.22 12 7.24 77.94 31 6.24 Yes 11 0.76 No 0 0 No -23 0.65 No 47 63.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 14680850 + NM_138348 OTULIN 1 0.09 0.13 9 9.27 92.15 31 6.85 Yes 18 1.21 Yes 0 0 No -30 0.86 Yes 40 67.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 23236347 + NM_005015 OXA1L 1 0.04 0.18 13 5.64 75.81 23 5.19 No 10 0.74 No 0 0 No -20 0.55 No 50 60.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 23236523 + NM_005015 OXA1L 1 0.13 0.63 32 4.12 82.1 23 7.75 Yes 10 1.88 Yes 25 0.96 Yes -22 0.85 Yes 48 92.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23236526 + NM_005015 OXA1L 1 0.04 0.18 12 4.92 83.3 26 7.94 Yes 13 1.9 Yes 25 0.96 Yes -25 0.83 Yes 45 91.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23238985 + NM_005015 OXA1L 1 0.47 2.04 56 3.93 67.55 19 6 Yes 1 0.59 No 22 0.66 Yes -30 0.54 No 40 47.49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 23239005 + NM_005015 OXA1L 1 0.08 0.36 23 -1.01 0 9 3.87 No 21 0.57 No 22 0.66 Yes -28 0.5 No 42 63.14 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 23240017 + NM_005015 OXA1L 1 0.32 1.69 59 2.28 0 44 6.92 Yes 31 1.74 Yes 0 0 No -43 0.85 Yes 27 95.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23240230 + NM_005015 OXA1L 1 0.09 0.74 34 2.95 0 31 6.08 Yes 18 1.31 Yes 0 0 No -30 0.92 Yes 40 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 41737360 - NM_000436 OXCT1 1 0.04 0.1 7 11.1 95.78 30 5.37 No 17 0.28 No 0 0 No -23 0.78 Yes 41 70.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 41740661 - NM_000436 OXCT1 1 0.19 0.61 31 3.63 75.24 22 5.1 No 51 0.81 Yes 0 0 No -27 0.69 Yes 43 46.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 41746181 - NM_000436 OXCT1 1 0.16 0.51 27 8.85 88.97 32 7.25 Yes 19 1.13 Yes 0 0 No -31 0.87 Yes 39 85.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 41748151 - NM_000436 OXCT1 1 0.09 0.29 16 3.45 74.11 41 6.15 Yes 56 1.31 Yes 0 0 No -34 0.47 No 36 70.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 41767176 - NM_000436 OXCT1 1 0.09 0.13 7 7.62 76.91 26 5.66 Yes 27 1.37 Yes 0 0 No -25 0.85 Yes 45 84.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 41784789 - NM_000436 OXCT1 1 0.34 0.53 24 4.31 81.82 31 4.92 No 53 0.9 Yes 0 0 No -25 0.44 No 45 49.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 41800308 - NM_000436 OXCT1 1 0.21 0.54 27 11.93 97.85 31 5.92 Yes 29 0.26 No 0 0 No -28 0.73 Yes 42 80.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 41800432 - NM_000436 OXCT1 1 0.75 1.72 55 7.81 80.79 19 7.62 Yes 6 1.58 Yes 0 0 No -18 0.62 No 52 84.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 41833624 - NM_000436 OXCT1 1 0.32 0.64 35 13.2 95.65 25 7.23 Yes 12 1.7 Yes 0 0 No -28 0.87 Yes 42 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 41847140 - NM_000436 OXCT1 1 0.27 0.64 28 8.56 83.95 28 9.74 Yes 50 1.14 Yes 0 0 No -27 0.82 Yes 43 67.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 41851814 - NM_000436 OXCT1 1 0.84 2.64 61 9.91 93.23 24 6.74 Yes 11 0.83 Yes 0 0 No -23 0.71 Yes 47 63.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 41852115 - NM_000436 OXCT1 1 0.05 0.17 9 9.74 87.7 26 6.71 Yes 13 1.16 Yes 0 0 No -25 0.97 Yes 45 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 41853166 - NM_000436 OXCT1 1 0.36 1.04 41 1.82 0 40 5.46 No 27 0.03 No 0 0 No -35 0.54 No 35 68.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 16307280 + NM_001330671 OXNAD1 1 0.54 0.13 9 -5.14 0 14 3.8 No 75 -3.37 No 0 0 No -41 0.55 No 29 80.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 16312451 + NM_001330671 OXNAD1 1 673.16 46.25 72 4.93 88.54 26 4.96 No 65 1.41 Yes 39 0.56 Yes -24 0.51 No 52 48.47 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 16312455 + NM_001330671 OXNAD1 1 2.39 0.14 10 0.23 0 30 5.34 No 69 1.41 Yes 0 0 No -28 0.46 No 48 44.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 16327830 + NM_001330671 OXNAD1 1 0.31 0.14 8 -1.62 0 14 3.87 No 1 1.25 Yes 26 0.85 Yes -13 0.42 No 57 43.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 16313466 + NM_001330671 OXNAD1 1 0.34 0.13 7 0.54 71.51 59 7.75 Yes 36 0.59 No 0 0 No -22 0.45 No 22 69.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 16313651 + NM_001330671 OXNAD1 1 3.55 1.25 48 8.95 79.59 29 5.66 Yes 70 1.26 Yes 28 0.92 Yes -28 0.93 Yes 42 92.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 16313754 + NM_001330671 OXNAD1 1 0.87 0.28 17 5.71 78.51 29 5.39 No 16 1.2 Yes 0 0 No -28 0.95 Yes 42 88.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 16323426 + NM_001330671 OXNAD1 1 0.43 0.17 10 2.3 84.41 32 7.99 Yes 19 1.5 Yes 0 0 No -31 0.45 No 39 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 16323430 + NM_001330671 OXNAD1 1 2.1 0.78 30 4.19 0 36 8.23 Yes 23 1.48 Yes 0 0 No -35 0.45 No 35 79.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 16327830 + NM_001330671 OXNAD1 1 1.75 0.54 28 -1.62 0 14 3.87 No 1 1.25 Yes 26 0.85 Yes -13 0.42 No 57 43.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 16337044 + NM_001330671 OXNAD1 1 0.35 0.21 15 8.37 93.92 19 6.15 Yes 6 1.43 Yes 0 0 No -31 0.5 No 39 49.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 16343229 + NM_001330671 OXNAD1 1 0.54 0.24 15 6.05 86.11 23 5.39 No 33 1.4 Yes 0 0 No -20 0.43 No 48 37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 16344917 + NM_001330671 OXNAD1 1 0.47 0.25 14 -0.53 78.14 32 8.13 Yes 68 0.44 No 29 0.9 Yes -32 0.75 Yes 38 89.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 107692036 + NM_018002 OXR1 1 0.25 0.18 10 6.38 81.38 61 7.34 Yes 64 1.87 Yes 0 0 No -25 0.59 No 17 30.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 107694682 + NM_018002 OXR1 1 0.42 0.32 19 8.79 87 22 7.21 Yes 75 1.17 Yes 26 0.78 Yes -21 0.92 Yes 49 90.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 107708971 + NM_018002 OXR1 1 0.27 0.18 13 10.73 93.47 26 5.44 No 13 1.02 Yes 0 0 No -25 0.64 No 45 83.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 107713810 + NM_018002 OXR1 1 0.26 0.19 11 7.84 88.66 30 6.02 Yes 17 0.29 No 0 0 No -29 0.45 No 34 73.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 107726081 + NM_018002 OXR1 1 0.27 0.21 14 7.38 86.51 36 5.73 Yes 23 0.61 No 0 0 No -23 0.69 Yes 47 70.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 107732852 + NM_018002 OXR1 1 2.93 1.26 49 5.93 89.04 30 5.31 No 33 0.64 No 0 0 No -23 0.68 Yes 48 64.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 107732905 + NM_018002 OXR1 1 0.82 0.35 22 4.62 84.23 23 5.2 No 70 0.51 No 0 0 No -22 0.57 No 48 82.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 107749747 + NM_018002 OXR1 1 64.67 27.67 72 11.85 79.38 26 5.19 No 29 0.39 No 25 0.52 Yes -34 0.58 No 45 75.8 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 107757996 + NM_018002 OXR1 1 0.25 0.17 9 6.08 73.86 38 6.67 Yes 12 1.43 Yes 24 0.7 Yes -24 0.55 No 46 39.78 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 25832129 + NM_017897 OXSM 1 0.89 0.32 17 3.23 68.64 30 6.48 Yes 17 0.99 Yes 0 0 No -29 0.72 Yes 41 59.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 25832459 + NM_017897 OXSM 1 0.55 0.15 10 1.41 0 17 4.42 No 70 -2.61 No 23 0.49 Yes -21 0.62 No 49 66.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 38219096 + NM_005109 OXSR1 1 0.12 0.13 8 11.32 91.79 70 9.5 Yes 57 2.08 Yes 0 0 No -44 0.64 No 26 70.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 38225766 + NM_005109 OXSR1 1 0.06 0.1 7 5.95 83.96 16 4.85 No 69 -4.71 No 0 0 No -23 0.65 No 47 63.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 38232225 + NM_005109 OXSR1 1 0.19 0.32 17 -1.31 0 35 5.94 Yes 53 1.66 Yes 0 0 No -35 0.45 No 36 63.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 38234772 + NM_005109 OXSR1 1 2.76 4.06 71 5.64 70.8 25 6.08 Yes 12 0.99 Yes 24 0.78 Yes -24 0.71 Yes 46 86.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 38240784 + NM_005109 OXSR1 1 0.17 0.25 16 9.91 92.91 34 4.3 No 35 0.91 Yes 0 0 No -31 0.82 Yes 39 88.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 38258163 + NM_005109 OXSR1 1 1.89 2.88 67 6.31 86.03 22 6.31 Yes 9 1.11 Yes 0 0 No -21 0.87 Yes 49 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 38276055 + NM_005109 OXSR1 1 0.59 0.74 33 4.96 75.46 30 5.48 No 17 0.05 No 0 0 No -29 0.72 Yes 41 68.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 38284037 + NM_005109 OXSR1 1 0.49 0.89 41 7.16 93.12 28 4.55 No 3 1.08 Yes 0 0 No -27 0.82 Yes 43 69.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 38294283 + NM_005109 OXSR1 1 0.07 0.14 7 2.93 65.89 31 5.27 No 2 -1.85 No 28 0.84 Yes -30 0.45 No 46 58.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 121661060 + NM_001256796 P2RX4 1 0.9 0.33 18 5.2 85.02 18 7 Yes 5 1.11 Yes 22 0.68 Yes -17 0.38 No 53 60.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 121661063 + NM_001256796 P2RX4 1 0.39 0.15 8 3.25 80.12 21 7.21 Yes 8 1.08 Yes 0 0 No -20 0.64 No 50 70.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 121661060 + NM_001256796 P2RX4 1 2.21 0.74 33 5.2 85.02 18 7 Yes 5 1.11 Yes 22 0.68 Yes -17 0.38 No 53 60.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 121661063 + NM_001256796 P2RX4 1 0.68 0.25 13 3.25 80.12 21 7.21 Yes 8 1.08 Yes 0 0 No -20 0.64 No 50 70.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 121666836 + NM_001256796 P2RX4 1 4.15 1.71 53 7.92 88.55 16 4.38 No 50 -2.24 No 0 0 No -28 0.67 Yes 42 81.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 121670616 + NM_001256796 P2RX4 1 0.46 0.18 12 8.08 80.87 32 6.71 Yes 25 1.65 Yes 0 0 No -31 0.66 No 33 59.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 3594271 - NM_175080 P2RX5 1 0.83 0.17 12 3.26 70.05 54 6.1 Yes 60 0.94 Yes 0 0 No -23 0.41 No 47 51.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 3588592 - NR_037928 P2RX5-TAX1BP3 1 0.13 0.19 12 2.57 0 14 4.47 No 9 0.75 No 0 0 No -19 0.64 No 49 65.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 3588875 - NR_037928 P2RX5-TAX1BP3 1 0.75 0.99 40 11.37 94.68 25 8.36 Yes 12 1.76 Yes 24 0.95 Yes -24 0.98 Yes 46 97.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 3598734 - NR_037928 P2RX5-TAX1BP3 1 0.14 0.13 9 3.09 85.75 15 5.1 No 21 0.9 Yes 0 0 No -33 0.35 No 51 49.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 121600073 + NR_033948 P2RX7 1 3.81 0.13 9 7.66 76.65 52 8.87 Yes 39 1.5 Yes 42 0.3 Yes -45 0.6 No 19 77.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 78207689 + NM_001324225 P2RY10 1 376.52 97.5 72 11.12 87.25 23 6.4 Yes 10 1.35 Yes 22 0.83 Yes -22 0.77 Yes 48 91.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 78207720 + NM_001324225 P2RY10 1 1.27 0.32 17 8.91 92.04 28 6.27 Yes 41 1.31 Yes 0 0 No -36 0.59 No 43 43.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 78210486 + NM_001324225 P2RY10 1 0.3 0.11 7 8.2 87.04 18 5.81 Yes 40 1.26 Yes 0 0 No -25 0.34 No 41 71.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 78214623 + NM_001324225 P2RY10 1 0.95 0.25 13 10.22 82.74 28 4.95 No 15 0.31 No 0 0 No -27 0.59 No 48 66.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 78216175 + NM_001324225 P2RY10 1 0.64 0.21 12 6.03 79.94 74 10 Yes 61 1.02 Yes 0 0 No -29 0.66 Yes 41 78.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 78207689 + NM_001324225 P2RY10 1 1.05 0.22 13 11.12 87.25 23 6.4 Yes 10 1.35 Yes 22 0.83 Yes -22 0.77 Yes 48 91.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 78205238 + NM_001324225 P2RY10 1 0.63 0.17 9 6.91 85.85 27 5.29 No 61 1.25 Yes 0 0 No -26 0.93 Yes 44 96.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 78207689 + NM_001324225 P2RY10 1 206.64 53.64 72 11.12 87.25 23 6.4 Yes 10 1.35 Yes 22 0.83 Yes -22 0.77 Yes 48 91.98 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 78207720 + NM_001324225 P2RY10 1 0.5 0.13 9 8.91 92.04 28 6.27 Yes 41 1.31 Yes 0 0 No -36 0.59 No 43 43.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 78214623 + NM_001324225 P2RY10 1 0.83 0.22 13 10.22 82.74 28 4.95 No 15 0.31 No 0 0 No -27 0.59 No 48 66.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 43213080 - NM_022356 P3H1 1 0.38 0.13 9 1.98 0 51 6.78 Yes 68 1.43 Yes 0 0 No -32 0.5 No 22 66.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 43213212 - NM_022356 P3H1 1 0.46 0.15 10 6.61 79.56 23 5.01 No 10 2.05 Yes 0 0 No -22 0.93 Yes 48 95.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43213987 - NM_022356 P3H1 1 0.29 0.14 9 -4.95 73.87 25 6.82 Yes 12 0.04 No 0 0 No -24 0.91 Yes 46 89.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43222124 - NM_022356 P3H1 1 0.42 0.28 17 -5.01 0 16 4.12 No 38 2.08 Yes 0 0 No -55 0.55 No 20 82.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 43222127 - NM_022356 P3H1 1 1.55 1.04 44 -4.18 0 48 10.52 Yes 35 2.09 Yes 29 0.32 Yes -47 0.56 No 23 83.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 43223529 - NM_022356 P3H1 1 0.18 0.14 9 -1.84 64.34 33 4.77 No 29 0.28 No 0 0 No -33 0.51 No 44 59.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 43225065 - NM_022356 P3H1 1 5.84 2.68 64 5.36 84.63 19 5 No 6 0.24 No 23 0.77 Yes -18 0.75 Yes 47 75.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 74804810 - NM_001142596 P4HA1 1 58.41 81.49 72 6.02 78.06 51 7.22 Yes 18 0.95 Yes 26 0.65 Yes -26 0.49 No 40 71.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 74807803 - NM_001142596 P4HA1 1 0.06 0.14 9 2.58 0 40 8.18 Yes 27 1.21 Yes 0 0 No -39 0.83 Yes 31 76.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 74823090 - NM_001142596 P4HA1 1 0.31 0.74 35 6.47 86.81 22 5 No 69 -4.3 No 0 0 No -25 0.75 Yes 45 73.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 74824230 - NM_001142596 P4HA1 1 1.71 3.69 69 3.76 0 46 6.1 Yes 56 0.96 Yes 0 0 No -33 0.64 No 37 68.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 74824234 - NM_001142596 P4HA1 1 0.19 0.44 26 0.25 83 42 5.82 Yes 52 0.97 Yes 0 0 No -29 0.75 Yes 41 61.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 74827130 - NM_001142596 P4HA1 1 0.07 0.17 10 9.96 87.04 15 4.59 No 2 0.34 No 0 0 No -27 0.59 No 43 65.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 74828716 - NM_001142596 P4HA1 1 0.17 0.29 18 5.19 75.37 30 5.5 No 2 1.05 Yes 0 0 No -29 0.53 No 41 54.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 74831938 - NM_001142596 P4HA1 1 0.08 0.17 12 -16.91 0 33 5.47 No 58 1.23 Yes 0 0 No -25 0.87 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 74831961 - NM_001142596 P4HA1 1 0.1 0.18 10 2.58 68.76 36 6.63 Yes 35 1.23 Yes 24 0.82 Yes -39 0.52 No 35 59.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 74837572 - NM_001142596 P4HA1 1 4.12 4.24 68 8.5 88.27 28 6.2 Yes 15 1.33 Yes 0 0 No -27 0.89 Yes 43 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79804889 - NM_000918 P4HB 1 0.1 1.32 47 4.08 78.03 24 5.95 Yes 11 1.34 Yes 23 0.95 Yes -23 0.95 Yes 47 96.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79804945 - NM_000918 P4HB 1 0.09 1.06 50 -4.66 0 24 4.99 No -2 0.13 No 0 0 No -23 0.65 No 51 33.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79805223 - NM_000918 P4HB 1 0.04 0.53 28 -12.32 0 28 4.87 No 72 1.2 Yes 24 0.44 Yes -27 0.96 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 79813565 - NM_000918 P4HB 1 0.07 0.71 33 2.13 0 17 4.3 No 54 -2.72 No 0 0 No -16 0.67 Yes 54 62.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 49031578 + NM_177939 P4HTM 1 0.6 0.25 15 0.51 80.65 26 3.51 No -4 0.35 No 0 0 No -23 0.93 Yes 47 88.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49033726 + NM_177939 P4HTM 1 0.26 0.14 8 2.14 83.57 35 6.25 Yes 22 0.07 No 0 0 No -34 0.93 Yes 36 87.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49035199 + NM_177939 P4HTM 1 1.24 0.5 22 9.77 89.96 30 5.92 Yes 17 0.35 No 0 0 No -30 0.67 Yes 40 71.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49036921 + NM_177939 P4HTM 1 0.27 0.13 7 9.97 82.72 21 5.92 Yes 8 2.42 Yes 20 0.89 Yes -20 0.84 Yes 50 89.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 49040413 + NM_177939 P4HTM 1 0.53 0.17 10 6.58 83.61 25 6.63 Yes 12 0.77 No 0 0 No -24 0.93 Yes 46 91.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56500835 + NM_006191 PA2G4 1 0.01 0.19 13 7.31 77.3 30 7.12 Yes 68 1.25 Yes 0 0 No -29 0.7 Yes 41 80.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56500949 + NM_006191 PA2G4 1 0.01 0.11 7 1.45 0 22 4.56 No 39 0.33 No 0 0 No -19 0.14 No 19 26.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56501699 + NM_006191 PA2G4 1 0.01 0.17 12 5.09 79.62 21 6.4 Yes 8 1.21 Yes 0 0 No -20 0.82 Yes 50 67.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 56503610 + NM_006191 PA2G4 1 0.01 0.21 10 1.65 54.07 40 6.71 Yes 51 1.45 Yes 22 0.88 Yes -39 0.53 No 59 25.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 56503622 + NM_006191 PA2G4 1 0.04 0.47 26 3.83 0 21 4.58 No 63 1.45 Yes 22 0.88 Yes -16 0.56 No 54 74.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 56504186 + NM_006191 PA2G4 1 0.02 0.32 18 -1.15 0 44 7.7 Yes 51 0.41 No 0 0 No -43 0.44 No 27 39.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56504735 + NM_006191 PA2G4 1 0.02 0.13 9 -8.44 0 21 4.88 No 74 0.21 No 20 0.72 Yes -8 0.28 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56504749 + NM_006191 PA2G4 1 0.01 0.11 7 -2.1 70.44 23 4.93 No 10 0.76 No 0 0 No -22 0.61 No 36 47.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 73598084 + NM_001267806 PAAF1 1 0.31 0.11 7 -8.01 0 12 4.19 No 58 0.95 Yes 29 0.35 Yes -38 0.48 No 28 60.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 73602369 + NM_001267806 PAAF1 1 0.26 0.18 11 2.75 73.66 31 7.07 Yes 67 0.93 Yes 0 0 No -30 0.63 No 33 69.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 73602544 + NM_001267806 PAAF1 1 0.13 0.1 7 3.96 71.02 25 4.19 No 50 0.34 No 0 0 No -24 0.45 No 46 48.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 73611355 + NM_001267806 PAAF1 1 6.34 2.92 64 6.35 81.13 17 6.02 Yes -1 -0.79 No 27 0.44 Yes -16 0.52 No 43 52.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 73630305 + NM_001267806 PAAF1 1 1.09 0.72 33 6.2 86.17 31 6.71 Yes 18 1.53 Yes 0 0 No -30 0.81 Yes 40 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73630342 + NM_001267806 PAAF1 1 0.86 0.56 26 6.94 83.26 28 6.16 Yes 55 1.52 Yes 0 0 No -27 0.83 Yes 43 79.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 101715579 - NM_002568 PABPC1 1 0 0.15 10 -2.88 0 14 4.24 No 42 0.82 Yes 0 0 No -33 0.78 Yes 37 74.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 101716280 - NM_002568 PABPC1 1 0.01 0.49 23 4.74 84.41 33 6.24 Yes 51 1.17 Yes 0 0 No -32 0.71 Yes 38 88.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 101717258 - NM_002568 PABPC1 1 0.02 0.61 34 3.98 77.02 25 6 Yes 12 0.58 No 24 0.85 Yes -24 0.54 No 46 49 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 101717284 - NM_002568 PABPC1 1 0 0.13 8 -3.47 0 32 5.37 No 6 0.38 No 24 0.85 Yes -31 0.75 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 101719193 - NM_002568 PABPC1 1 0.01 0.33 17 4.28 79.47 42 6.41 Yes 48 0.62 No 0 0 No -27 0.35 No 43 37.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 101719225 - NM_002568 PABPC1 1 0 0.1 7 -16.16 0 29 6.11 Yes 16 0.62 No 0 0 No -28 0.7 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 101719716 - NM_002568 PABPC1 1 0 0.15 10 7.8 79.38 48 7.35 Yes 35 1.23 Yes 0 0 No -47 0.74 Yes 23 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 101720236 - NM_002568 PABPC1 1 0.01 0.43 23 4.4 68.89 51 7.61 Yes 14 0.9 Yes 0 0 No -29 0.32 No 38 33.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 101721446 - NM_002568 PABPC1 1 0 0.14 9 -0.67 0 14 3.02 No 15 1.11 Yes 0 0 No -27 0.66 Yes 43 77.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 101721902 - NM_002568 PABPC1 1 0.02 1.06 37 9.36 88.73 34 6.24 Yes 71 1.82 Yes 32 0.09 Yes -34 0.75 Yes 33 73.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 101721959 - NM_002568 PABPC1 1 0 0.22 12 -2.1 0 27 9.71 Yes 51 2.08 Yes 0 0 No -26 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 101726792 - NM_002568 PABPC1 1 0.01 0.26 18 5.02 80.12 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.66 No 51 85.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 101727849 - NM_002568 PABPC1 1 0 0.11 7 2.26 70.51 22 4.34 No 68 0.72 No 23 0.8 Yes -24 0.37 No 46 46.8 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 43542097 + NR_134983 PABPC1L 1 1.53 0.24 15 3.98 77.41 27 4.4 No 2 1 Yes 0 0 No -51 0.36 No 40 62.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 43559100 + NR_134983 PABPC1L 1 10.66 1.57 52 11.3 87.62 29 5.66 Yes 71 -1.91 No 28 0.53 Yes -25 0.75 Yes 45 86.89 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 43559161 + NR_134983 PABPC1L 1 5.79 0.92 41 1.76 74.18 37 6.23 Yes 51 -3.2 No 0 0 No -37 0.74 Yes 33 76.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 43563141 + NR_134983 PABPC1L 1 1.31 0.21 13 8.45 73.44 25 7.74 Yes 12 1.41 Yes 0 0 No -25 0.57 No 45 74.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 43565534 + NR_134983 PABPC1L 1 11.53 1.71 52 5.65 84.29 20 5.03 No 37 0.98 Yes 29 0.72 Yes -19 0.66 No 51 64.8 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 43566466 + NR_134983 PABPC1L 1 1.01 0.11 7 4.89 73.02 49 7.23 Yes 36 0.82 Yes 20 0.83 Yes -30 0.89 Yes 40 76.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 43566742 + NR_134983 PABPC1L 1 3.64 0.56 22 3.56 73.56 22 4.92 No 2 0.92 Yes 21 0.8 Yes -28 0.56 No 49 65.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 40027471 - NM_003819 PABPC4 1 0.1 0.64 30 1.38 68.74 12 3.71 No -1 1.2 Yes 22 0.9 Yes -15 0.36 No 59 62.31 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 40029402 - NM_003819 PABPC4 1 0.06 0.28 15 5.21 0 15 4.58 No 33 0.92 Yes 0 0 No -45 0.67 Yes 25 66.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 40034560 - NM_003819 PABPC4 1 0.01 0.11 7 4.31 76.82 16 4.45 No 3 0.23 No 23 0.57 Yes -22 0.7 Yes 48 62.34 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 40034631 - NM_003819 PABPC4 1 0.01 0.11 8 3.2 81.46 31 6.06 Yes 18 0.19 No 23 0.85 Yes -23 0.52 No 47 60.85 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 40037378 - NM_003819 PABPC4 1 0.03 0.35 20 8.4 86.87 25 6.27 Yes 12 1.18 Yes 24 0.88 Yes -24 0.96 Yes 46 95.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 20703380 + NM_001258345 PACRGL 1 5.08 0.43 27 9.32 80.22 23 5.39 No 55 0.87 Yes 22 0.7 Yes -22 0.75 Yes 48 71.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 20703763 + NM_001258345 PACRGL 1 15.85 1.26 39 1.42 69.91 33 5.68 Yes 33 1.32 Yes 32 0.88 Yes -32 0.71 Yes 38 79.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 20716746 + NM_001258345 PACRGL 1 0.93 0.11 7 7.11 87.64 21 4.86 No 8 0.39 No 0 0 No -20 0.76 Yes 50 70.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 20717729 + NM_001258345 PACRGL 1 2.73 0.33 20 6.44 71.63 40 6 Yes 18 0.85 Yes 24 0.73 Yes -31 0.45 No 39 40.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 20720438 + NM_001258345 PACRGL 1 3.03 0.35 19 10.54 88.97 30 6.83 Yes 65 0.75 No 30 0.79 Yes -30 0.9 Yes 40 91.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65870244 + NM_018026 PACS1 1 0.17 0.18 9 11.86 91.79 31 5.97 Yes 76 0.05 No 0 0 No -30 0.71 Yes 40 77.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65873595 + NM_018026 PACS1 1 0.48 0.43 19 9.17 88.06 30 5.46 No 1 0.85 Yes 0 0 No -29 0.91 Yes 41 89.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65957037 + NM_018026 PACS1 1 0.13 0.1 7 5.61 67.84 36 6.55 Yes 23 1.1 Yes 0 0 No -35 0.69 Yes 35 88.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65965570 + NM_018026 PACS1 1 0.07 0.14 8 9.17 87.56 46 6.93 Yes 33 1.17 Yes 0 0 No -45 0.47 No 29 60.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65984976 + NM_018026 PACS1 1 0.7 1.49 50 6.62 83.49 12 4.01 No 27 0.44 No 27 0.86 Yes -27 0.87 Yes 43 92.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65984981 + NM_018026 PACS1 1 0.11 0.21 14 3.85 0 17 4.37 No 32 0.42 No 0 0 No -32 0.78 Yes 38 88.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65987015 + NM_018026 PACS1 1 0.06 0.13 9 12.07 84.5 15 4.87 No 67 -0.37 No 23 0.62 Yes -19 0.68 Yes 51 75.83 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65998718 + NM_018026 PACS1 1 0.19 0.25 15 5.09 83.88 34 6.13 Yes NA NA NA 0 0 No -26 0.66 No 44 69.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 66003347 + NM_018026 PACS1 1 0.06 0.11 8 4.03 66 43 6.48 Yes -3 0.78 Yes 30 0.92 Yes -35 0.52 No 35 65.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 66007500 + NM_018026 PACS1 1 0.11 0.17 9 13.43 90.87 29 5.92 Yes 39 0.83 Yes 0 0 No -28 0.81 Yes 42 89.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105837078 + NM_001243127 PACS2 1 1.18 0.22 15 6.14 88.68 22 7.21 Yes 9 1.13 Yes 0 0 No -21 0.95 Yes 49 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105837738 + NM_001243127 PACS2 1 2.52 0.43 21 6.49 85.89 29 5.39 No 53 1.01 Yes 0 0 No -28 0.84 Yes 42 67.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 105847290 + NM_001243127 PACS2 1 6.67 0.88 39 3.75 81.14 19 5 No 71 -2.35 No 21 0.47 Yes -18 0.69 Yes 52 66.68 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 105849714 + NM_001243127 PACS2 1 1.72 0.25 17 0.68 73.65 15 5.29 No 50 1.27 Yes 0 0 No -21 0.88 Yes 49 76.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105851220 + NM_001243127 PACS2 1 1.22 0.22 15 2.07 0 33 6.71 Yes 20 2.4 Yes 0 0 No -32 0.88 Yes 38 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105859097 + NM_001243127 PACS2 1 5.2 0.46 28 10.17 89.16 25 5.48 No 12 0.86 Yes 24 0.89 Yes -24 0.89 Yes 46 78.68 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 43268158 - NM_001184970 PACSIN2 1 0.06 0.13 9 6.2 80.03 28 6.61 Yes 15 1.41 Yes 0 0 No -27 0.95 Yes 43 93.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43273579 - NM_001184970 PACSIN2 1 0.09 0.14 8 6.6 85.52 23 5.29 No NA NA NA 0 0 No -23 0.48 No 48 40.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 43275173 - NM_001184970 PACSIN2 1 0.12 0.17 8 -19.66 69.99 41 7.14 Yes 28 0.87 Yes 0 0 No -40 0.72 Yes 30 83.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43284801 - NM_001184970 PACSIN2 1 0.11 0.17 11 -0.59 0 18 5.55 No 5 0.79 Yes 0 0 No -25 0.91 Yes 45 70.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43305572 - NM_001184970 PACSIN2 1 0.28 0.51 24 6.09 78.43 27 5.93 Yes 2 1.01 Yes 26 0.78 Yes -26 0.65 No 44 79.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 43362367 - NM_001184970 PACSIN2 1 0.31 0.33 18 10.61 88.27 29 5.39 No 38 -2.28 No 0 0 No -25 0.34 No 45 61.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 43386545 - NM_001184970 PACSIN2 1 0.32 0.38 22 14.3 89.41 24 11.21 Yes 11 1.48 Yes 0 0 No -23 0.81 Yes 47 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43389787 - NM_001184970 PACSIN2 1 0.15 0.17 9 8.21 87.9 38 6.48 Yes 69 0.51 No 30 0.3 Yes -28 0.38 No 40 64.86 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 2502318 + NM_000430 PAFAH1B1 1 0.13 0.14 7 7.22 82.29 32 6.59 Yes 26 0.61 No 0 0 No -31 0.87 Yes 39 87.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 2507739 + NM_000430 PAFAH1B1 1 0.16 0.18 11 6.31 79.69 16 6.88 Yes 3 1.37 Yes 0 0 No -27 0.5 No 36 57.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2509054 + NM_000430 PAFAH1B1 1 0.19 0.19 13 10.28 83.62 29 4.87 No 67 1.22 Yes 0 0 No -31 0.7 Yes 39 77.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2516951 + NM_000430 PAFAH1B1 1 0.24 0.29 14 4.34 84.33 17 4.8 No 4 0.28 No 24 0.73 Yes -21 0.47 No 49 39.08 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 2538676 + NM_000430 PAFAH1B1 1 0.95 1.07 43 5.58 83.65 32 4.85 No 19 0.61 No 31 0.72 Yes -31 0.64 No 39 85.68 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 2545926 + NM_000430 PAFAH1B1 1 0.42 1.32 49 4.32 72.29 21 5.17 No 8 1.04 Yes 0 0 No -20 0.65 No 50 71.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 2557147 + NM_000430 PAFAH1B1 1 0.08 0.25 16 4.92 84.79 17 3.89 No 62 0.93 Yes 0 0 No -28 0.36 No 54 34.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2566074 + NM_000430 PAFAH1B1 1 0.39 1.38 45 5.94 80.57 20 6.04 Yes 57 1.41 Yes 0 0 No -30 0.7 Yes 35 61.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 2574684 + NM_000430 PAFAH1B1 1 0.18 0.74 33 5.24 85.02 17 6.93 Yes 4 1.22 Yes 0 0 No -29 0.56 No 43 57.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2574687 + NM_000430 PAFAH1B1 1 0.1 0.4 19 2.24 80.12 20 7.14 Yes 7 1.19 Yes 0 0 No -19 0.68 Yes 51 68.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 2580809 + NM_000430 PAFAH1B1 1 0.23 0.76 33 8.51 88.38 16 4.97 No 3 0.6 No 0 0 No -26 0.58 No 50 54.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 117023162 + NM_001184748 PAFAH1B2 1 0.16 0.18 13 3.05 0 9 3.87 No 44 0.94 Yes 0 0 No -26 0.65 No 44 57.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 117030657 + NM_001184748 PAFAH1B2 1 0.11 0.18 11 -2.67 0 16 4.11 No 22 0.85 Yes 0 0 No -34 0.36 No 36 49.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 117031862 + NM_001184748 PAFAH1B2 1 0.09 0.17 10 -9.22 0 25 5.09 No 12 1.13 Yes 0 0 No -24 0.78 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 26308960 - NM_000437 PAFAH2 1 0.82 0.21 11 -5.97 0 13 4.24 No 60 -1.98 No 0 0 No -31 0.7 Yes 39 69.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 26317413 - NM_000437 PAFAH2 1 1.35 0.13 7 -1.03 70.99 19 4.69 No 56 -5.19 No 18 0.8 Yes -18 0.76 Yes 52 79.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 26324113 - NM_000437 PAFAH2 1 14.63 1.11 40 -4.03 56.65 35 5.83 Yes 70 1.86 Yes 28 0.87 Yes -34 0.8 Yes 36 94.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 81904249 - NM_018440 PAG1 1 0.46 0.31 16 6.61 92.68 28 6.16 Yes 42 1.25 Yes 0 0 No -27 0.32 No 45 33.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 81907276 - NM_018440 PAG1 1 2.75 1.88 49 11.35 83 42 8.1 Yes 64 0.73 No 0 0 No -28 0.61 No 42 44.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 81907575 - NM_018440 PAG1 1 0.95 0.67 29 8.1 90.17 40 6.1 Yes 22 0.78 Yes 0 0 No -24 0.52 No 46 72.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 81937532 - NM_018440 PAG1 1 1.17 0.65 31 6.32 96.03 21 5.17 No 3 0.41 No 0 0 No -30 0.61 No 40 57.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 81938576 - NM_018440 PAG1 1 1.15 0.76 33 3.45 0 47 8.18 Yes 34 2.02 Yes 0 0 No -46 0.81 Yes 24 95.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 81938580 - NM_018440 PAG1 1 0.23 0.22 13 -0.04 81.65 43 7.93 Yes 30 2.03 Yes 0 0 No -42 0.74 Yes 28 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 81958447 - NM_018440 PAG1 1 0.48 0.26 14 4.42 78.52 32 6.82 Yes 19 0.52 No 0 0 No -27 0.65 No 43 69.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 81961100 - NM_018440 PAG1 1 0.82 0.22 16 6.03 80.42 33 5.5 No 30 0.09 No 0 0 No -32 0.56 No 43 77.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 81977626 - NM_018440 PAG1 1 0.82 0.26 15 8.57 79.88 19 5.66 Yes 6 0.45 No 0 0 No -18 0.53 No 45 63.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 81977674 - NM_018440 PAG1 1 1.08 0.29 17 5.6 74.09 56 6.11 Yes 43 1.24 Yes 0 0 No -32 0.88 Yes 38 95.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 81989650 - NM_018440 PAG1 1 3.01 0.79 32 8.46 90.57 19 4.21 No 67 0.1 No 0 0 No -22 0.91 Yes 48 67.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 82005486 - NM_018440 PAG1 1 0.52 0.19 10 7.65 72.98 27 5.29 No 33 0.84 Yes 0 0 No -29 0.86 Yes 41 67.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 29830879 + NM_024516 PAGR1 1 0.45 0.5 24 1.66 0 22 8.25 Yes 9 1.17 Yes 0 0 No -21 0.8 Yes 49 72.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 57314842 + NM_001079525 PAICS 1 0.01 0.15 9 1.71 68.2 22 5.1 No 70 -4.39 No 28 0.4 Yes -21 0.55 No 44 59.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 57318121 + NM_001079525 PAICS 1 0.04 0.4 21 -4.55 49.36 43 7.42 Yes 30 0.95 Yes 0 0 No -42 0.69 Yes 28 70.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 57321182 + NM_001079525 PAICS 1 0.14 1.26 50 1.62 61.22 38 7.16 Yes 25 0.63 No 0 0 No -20 0.51 No 33 27.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 57322278 + NM_001079525 PAICS 1 0.37 2.92 65 2.4 83.92 23 5.38 No 36 1.04 Yes 0 0 No -26 0.68 Yes 44 80.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 43528724 - NM_006451 PAIP1 1 0.31 0.32 17 6.12 79.37 42 6.29 Yes 53 0.58 No 0 0 No -27 0.77 Yes 43 66.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 43533849 - NM_006451 PAIP1 1 0.03 0.1 7 8.83 87.9 22 7.4 Yes 9 1.28 Yes 0 0 No -26 0.53 No 49 42.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 43547940 - NM_006451 PAIP1 1 0.28 0.44 23 8.71 79.65 25 5.55 No 1 0.27 No 0 0 No -24 0.89 Yes 46 86.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 138700256 + NM_001033112 PAIP2 1 0.11 0.49 25 -2.04 0 29 6.33 Yes 16 0.08 No 0 0 No -29 0.71 Yes 39 50.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 77034200 - NM_001128620 PAK1 1 1.24 0.56 27 7.68 75.7 45 8.24 Yes 32 2.33 Yes 44 0.7 Yes -44 0.68 Yes 26 92.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77040358 - NM_001128620 PAK1 1 1.45 0.49 27 8.85 88.97 32 7.12 Yes 19 1.11 Yes 31 0.73 Yes -31 0.85 Yes 39 87.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77047305 - NM_001128620 PAK1 1 0.19 0.46 24 6.86 79.39 21 5.66 Yes 45 1.24 Yes 0 0 No -57 0.75 Yes 13 63.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 77060811 - NM_001128620 PAK1 1 0.1 0.28 17 8.66 81.59 19 5.53 No 6 1.41 Yes 0 0 No -27 0.72 Yes 43 62.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 77066788 - NM_001128620 PAK1 1 0.14 0.33 20 1.54 74.74 83 6.92 Yes 3 0.95 Yes 0 0 No -21 0.42 No 49 47.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 77067607 - NM_001128620 PAK1 1 1.05 2.6 62 7.38 77.93 25 4.33 No 64 0.89 Yes 0 0 No -24 0.65 No 46 76.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 77068753 - NM_001128620 PAK1 1 0.22 0.51 26 3.59 81.1 30 4.16 No 3 1.05 Yes 0 0 No -29 0.8 Yes 41 77.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77068777 - NM_001128620 PAK1 1 0.04 0.11 7 6.5 83.46 22 5.1 No 15 0.22 No 0 0 No -21 0.81 Yes 49 70.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 77090455 - NM_001128620 PAK1 1 0.08 0.18 12 6.87 75.4 19 6.16 Yes 29 1.74 Yes 23 0.69 Yes -18 0.8 Yes 52 90.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77102415 - NM_001128620 PAK1 1 0.09 0.19 10 3.59 87.48 23 3.44 No 34 1.64 Yes 0 0 No -22 0.7 Yes 48 73.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77102971 - NM_001128620 PAK1 1 0.15 0.35 14 9.29 92.33 22 7.94 Yes 9 0.82 Yes 0 0 No -21 0.89 Yes 49 88.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77103584 - NM_001128620 PAK1 1 13.46 5.74 71 2.3 74.61 40 5.81 Yes 54 0.69 No 25 0.73 Yes -26 0.52 No 44 63.13 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 77108139 - NM_001128620 PAK1 1 2.65 1.11 41 6.05 85.52 22 4.69 No 20 0.38 No 21 0.86 Yes -21 0.94 Yes 49 90.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 77109626 - NM_001128620 PAK1 1 0.29 0.13 9 7.37 86.88 18 4.68 No 5 0.28 No 0 0 No -21 0.61 No 53 58.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 77135975 - NM_001128620 PAK1 1 0.78 0.32 19 3.02 79.12 20 3.84 No 55 1.25 Yes 0 0 No -19 0.54 No 47 53.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 77164958 - NM_001128620 PAK1 1 0.22 0.11 7 9.29 86.62 23 5.82 Yes 10 0.58 No 0 0 No -22 0.69 Yes 48 68.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 10697553 + NM_017906 PAK1IP1 1 21.11 18.22 72 8.56 90.13 22 6.21 Yes 9 0.71 No 24 0.74 Yes -21 0.71 Yes 49 71.5 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 10702799 + NM_017906 PAK1IP1 1 0.11 0.24 12 -4.96 80 22 6.32 Yes 9 1.78 Yes 0 0 No -21 0.87 Yes 49 86.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 10702804 + NM_017906 PAK1IP1 1 0.17 0.33 19 -8.35 0 15 3.81 No 14 1.76 Yes 0 0 No -26 0.75 Yes 44 87.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 10709186 + NM_017906 PAK1IP1 1 0.05 0.1 7 -10.89 0 39 5.83 Yes 11 0.36 No 0 0 No -31 0.34 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 10709189 + NM_017906 PAK1IP1 1 0.09 0.17 10 -0.22 0 42 5.99 Yes 14 0.37 No 0 0 No -34 0.4 No 36 36.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 10709450 + NM_017906 PAK1IP1 1 0.15 0.33 18 2.17 81.23 21 3.41 No 38 1.09 Yes 25 0.85 Yes -50 0.86 Yes 20 92.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 10709474 + NM_017906 PAK1IP1 1 0.07 0.15 10 -2.74 0 29 5.7 Yes 62 1.1 Yes 0 0 No -29 0.56 No 42 57.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 196476717 + NM_002577 PAK2 1 0.11 0.1 7 2.66 0 29 6.56 Yes 16 0.48 No 0 0 No -28 0.93 Yes 42 95.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196492791 + NM_002577 PAK2 1 2.06 1.88 61 10.17 88.27 32 5.69 Yes 59 0.8 Yes 0 0 No -26 0.61 No 47 62.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 196510260 + NM_002577 PAK2 1 0.05 0.15 7 7.48 93.69 15 5.48 No 2 0.31 No 0 0 No -23 0.52 No 47 72.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 196534074 + NM_002577 PAK2 1 0.24 0.6 30 7.04 85.64 29 6.44 Yes 16 1.11 Yes 0 0 No -28 0.89 Yes 42 77.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196537443 + NM_002577 PAK2 1 0.07 0.24 15 -2.17 0 14 4 No -3 1.16 Yes 26 0.83 Yes -29 0.65 No 41 75.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 196538659 + NM_002577 PAK2 1 0.1 0.25 16 7.37 77.56 30 5.83 Yes 61 -2.26 No 0 0 No -29 0.71 Yes 43 56.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 196547264 + NM_002577 PAK2 1 0.11 0.32 18 8.49 84.85 21 5.66 Yes 35 1.8 Yes 0 0 No -47 0.41 No 50 52.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23619399 - NM_024675 PALB2 1 0.23 0.11 8 9.85 90.02 26 6.87 Yes 13 0.8 Yes 0 0 No -26 0.66 No 44 55.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23637709 - NM_024675 PALB2 1 0.8 0.49 23 1.7 0 13 4.36 No 22 0.65 No 0 0 No -34 0.78 Yes 36 88.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23641652 - NM_024675 PALB2 1 0.83 0.19 11 7.43 86.41 30 4.6 No 55 0.93 Yes 0 0 No -23 0.42 No 51 50.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23649310 - NM_024675 PALB2 1 1.42 0.76 31 0.97 63.66 33 4.57 No 71 -3.57 No 29 0.4 Yes -19 0.48 No 51 63.53 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 23649914 - NM_024675 PALB2 1 8.35 2.6 64 4.97 87.68 31 5.57 Yes 22 0.12 No 30 0.71 Yes -30 0.86 Yes 40 87.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 102231554 + NM_001319943 PAM 1 1.27 0.61 33 4.38 81.01 17 5.56 Yes 4 1.2 Yes 0 0 No -24 0.46 No 38 55.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 102235639 + NM_001319943 PAM 1 0.7 0.32 16 6.55 89.24 19 5.83 Yes 28 -2.29 No 0 0 No -18 0.78 Yes 52 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 102250248 + NM_001319943 PAM 1 0.87 0.43 20 7.01 81.48 17 4.77 No 4 1.19 Yes 0 0 No -24 0.91 Yes 46 87.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 102264729 + NM_001319943 PAM 1 0.35 0.14 8 5.84 85.36 22 4.75 No 66 -5.69 No 0 0 No -24 0.78 Yes 46 82.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 102270075 + NM_001319943 PAM 1 0.31 0.15 10 8.76 91.02 33 4.61 No 45 0.97 Yes 0 0 No -20 0.81 Yes 50 75.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 102278873 + NM_001319943 PAM 1 0.63 0.24 10 6.19 86.64 23 6.05 Yes 10 0.89 Yes 0 0 No -22 0.81 Yes 48 79.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 102329474 + NM_001319943 PAM 1 0.26 0.13 8 12.44 92.05 31 5.81 Yes 18 0.93 Yes 0 0 No -26 0.91 Yes 44 91.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 102333529 + NM_001319943 PAM 1 0.27 0.13 8 6.69 78.69 29 7.17 Yes 16 0.94 Yes 0 0 No -28 0.75 Yes 42 75.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 102360837 + NM_001319943 PAM 1 18.56 4.81 70 -0.52 67.96 32 5.79 Yes 10 0.78 Yes 28 0.42 Yes -28 0.57 No 42 83.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 102363885 + NM_001319943 PAM 1 53.9 8.9 72 7.88 79.86 28 6.87 Yes 25 0.44 No 27 0.91 Yes -27 0.91 Yes 43 96.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 102363885 + NM_001319943 PAM 1 42.8 7.57 71 7.88 79.86 28 6.87 Yes 25 0.44 No 27 0.91 Yes -27 0.91 Yes 43 96.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56713296 - NM_001166279 PAN2 1 0.25 0.11 8 2.92 69.63 15 5.74 Yes 22 0.11 No 28 0.88 Yes -32 0.31 No 56 52.52 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56716455 - NM_001166279 PAN2 1 1.61 0.54 23 3.56 73.55 38 7.89 Yes -4 0.87 Yes 29 0.53 Yes -31 0.42 No 33 46.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 56716566 - NM_001166279 PAN2 1 0.61 0.18 10 -2.74 0 90 9.63 Yes 1 -0.92 No 25 0.96 Yes -57 0.3 No 14 37.25 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 56716571 - NM_001166279 PAN2 1 1.99 0.63 35 4.18 65.91 85 9.38 Yes 72 2.12 Yes 25 0.96 Yes -47 0.43 No 19 69.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 56720218 - NM_001166279 PAN2 1 0.87 0.26 16 -0.12 66.33 14 5.42 No 72 1.19 Yes 20 0.78 Yes -26 0.62 No 52 35.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 56720284 - NM_001166279 PAN2 1 0.62 0.22 14 8.29 87.7 19 7.32 Yes 6 1.23 Yes 0 0 No -27 0.51 No 43 72.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 28762279 + NM_175854 PAN3 1 0.28 0.11 7 9.63 92.73 32 4.62 No 45 0.1 No 0 0 No -32 0.46 No 38 34.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28765387 + NM_175854 PAN3 1 2.27 0.96 34 7.57 79.23 32 8.48 Yes 19 1.91 Yes 0 0 No -31 0.8 Yes 39 80.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28768626 + NM_175854 PAN3 1 1.06 0.42 24 10.07 88.27 117 10.97 Yes NA NA NA 0 0 No -28 0.27 No 42 36.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28785066 + NM_175854 PAN3 1 0.81 0.32 18 2.82 0 23 6.63 Yes 10 1.04 Yes 0 0 No -22 0.94 Yes 48 94.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28813715 + NM_175854 PAN3 1 0.93 0.54 27 9.63 89.54 25 6.4 Yes 12 1.11 Yes 0 0 No -24 0.91 Yes 46 84.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28777120 + NM_175854 PAN3 1 1.96 0.81 41 10.99 92.45 42 8.31 Yes 29 1.09 Yes 0 0 No -41 0.79 Yes 29 75.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28785066 + NM_175854 PAN3 1 0.52 0.24 14 2.82 0 23 6.63 Yes 10 1.04 Yes 0 0 No -22 0.94 Yes 48 94.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28795905 + NM_175854 PAN3 1 0.29 0.17 10 10.58 81.2 23 5.39 No 57 1.76 Yes 0 0 No -23 0.49 No 48 51.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 28801300 + NM_175854 PAN3 1 0.23 0.13 7 7.04 85.86 16 6 Yes 54 -3.46 No 0 0 No -29 0.6 No 41 59.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28813715 + NM_175854 PAN3 1 15.23 8.67 72 9.63 89.54 25 6.4 Yes 12 1.11 Yes 0 0 No -24 0.91 Yes 46 84.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28826069 + NM_175854 PAN3 1 0.21 0.13 8 4.03 87.29 27 5.19 No 66 -0.91 No 0 0 No -26 0.79 Yes 44 67.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 28838375 + NM_175854 PAN3 1 0.17 0.11 7 3.25 71.95 29 4.87 No 4 1.05 Yes 0 0 No -28 0.47 No 46 49.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 28840854 + NM_175854 PAN3 1 11.27 7.79 72 1.82 76.75 26 4.56 No 33 0.22 No 0 0 No -30 0.8 Yes 40 79.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 28840896 + NM_175854 PAN3 1 0.36 0.24 13 4.21 80.91 22 4.46 No 15 0.41 No 0 0 No -21 0.5 No 43 48.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28849052 + NM_175854 PAN3 1 0.85 0.5 24 3.49 81.07 12 4.8 No 74 -3.98 No 0 0 No -28 0.27 No 31 61.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28849062 + NM_175854 PAN3 1 0.94 0.51 28 4.48 0 15 4.36 No 53 -2.16 No 0 0 No -26 0.4 No 49 67.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28849516 + NM_175854 PAN3 1 0.66 0.36 20 6.38 74.96 40 6.6 Yes 44 0.64 No 0 0 No -28 0.6 No 42 73.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 28851434 + NM_175854 PAN3 1 0.76 0.43 24 4.03 83.76 42 6.4 Yes 51 -2.07 No 0 0 No -44 0.41 No 32 46.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 28852258 + NM_175854 PAN3 1 1.19 1.04 43 0.54 0 19 4.36 No 6 1.11 Yes 0 0 No -18 0.9 Yes 52 95.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 28866522 + NM_175854 PAN3 1 2.42 1.68 53 1.37 0 57 8.22 Yes 23 0.02 No 0 0 No -29 0.71 Yes 41 68.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 91354099 - NM_148977 PANK1 1 3.21 0.83 41 7 90.98 36 6.05 Yes 23 0.35 No 0 0 No -35 0.71 Yes 35 70.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 91386390 - NM_148977 PANK1 1 4.52 1.14 39 7.87 98.8 30 8.73 Yes 43 -1.47 No 29 0.42 Yes -26 0.36 No 44 45.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 91394823 - NM_148977 PANK1 1 66.16 13.83 72 5.92 89.38 27 6.25 Yes 14 0.6 No 0 0 No -26 0.8 Yes 44 73.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 91398964 - NM_148977 PANK1 1 3.53 0.71 35 0.73 63.58 40 6.71 Yes 27 0.7 No 0 0 No -39 0.89 Yes 31 91.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 91399000 - NM_148977 PANK1 1 0.66 0.15 8 5.24 74.44 22 5.7 Yes 9 0.28 No 27 0.68 Yes -27 0.84 Yes 43 88.43 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 91403576 - NM_148977 PANK1 1 0.52 0.11 7 9.79 89.19 20 5 No 7 0.22 No 0 0 No -20 0.39 No 50 59.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 3889318 + NM_153640 PANK2 1 0.52 0.32 17 9.78 84.61 21 6.7 Yes 8 0.31 No 20 0.84 Yes -27 0.57 No 42 64.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 3889783 + NM_153640 PANK2 1 0.51 0.31 17 7.73 93.28 27 5.2 No 52 1.03 Yes 0 0 No -26 0.66 Yes 44 78.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3894035 + NM_153640 PANK2 1 0.21 0.33 20 6.41 93.38 28 5.67 Yes 15 0.84 Yes 0 0 No -27 0.86 Yes 43 84.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 167988953 - NM_024594 PANK3 1 0.33 0.61 32 5.28 81.9 34 4.8 No 72 0.59 No 0 0 No -26 0.42 No 44 38.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 167995269 - NM_024594 PANK3 1 0.12 0.19 9 5.91 91.93 82 7.55 Yes 52 0.46 No 0 0 No -24 0.96 Yes 46 97.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 168005713 - NM_024594 PANK3 1 0.11 0.14 9 7.06 78.95 14 4.77 No 41 0.81 Yes 22 0.81 Yes -22 0.74 Yes 48 52.66 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 2442188 - NM_018216 PANK4 1 20.5 6.75 70 8.31 88.4 25 5.82 Yes 45 1.26 Yes 24 0.88 Yes -24 0.87 Yes 46 86.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 2442823 - NM_018216 PANK4 1 0.67 0.39 17 -0.62 0 31 6.97 Yes 43 2.32 Yes 0 0 No -30 0.94 Yes 40 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2449333 - NM_018216 PANK4 1 0.7 0.21 12 8.77 91.99 22 6.14 Yes 9 0.94 Yes 0 0 No -21 0.81 Yes 49 79.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2450212 - NM_018216 PANK4 1 0.26 0.11 7 5.26 86.45 23 4.79 No 10 1.64 Yes 0 0 No -22 0.96 Yes 48 96.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2451436 - NM_018216 PANK4 1 0.34 0.15 9 0.17 68.73 62 8.26 Yes 49 0.59 No 26 0.97 Yes -34 0.72 Yes 36 83.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 2453381 - NM_018216 PANK4 1 0.42 0.14 9 12.04 94.57 38 7.14 Yes 25 0.79 Yes 37 0.67 Yes -37 0.92 Yes 33 91.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 93907479 + NM_015368 PANX1 1 2.08 1.29 52 8.13 90.02 33 5.12 No -4 0.73 No 0 0 No -32 0.81 Yes 38 89.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 93908912 + NM_015368 PANX1 1 1.54 0.99 42 10.84 84.5 25 5.03 No 42 1.18 Yes 0 0 No -24 0.7 Yes 46 73.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78909040 + NM_001114394 PAPD4 1 0.16 0.19 10 8.24 90.71 33 6.07 Yes 53 0.34 No 0 0 No -32 0.8 Yes 38 88.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 78909757 + NM_001114394 PAPD4 1 1.5 1.72 54 10.96 85.69 22 5.65 Yes 9 0.69 No 29 0.85 Yes -29 0.73 Yes 41 67.97 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 78910294 + NM_001114394 PAPD4 1 4.02 4.38 72 6.68 72.7 64 9.61 Yes 51 0.99 Yes 0 0 No -38 0.84 Yes 32 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78913352 + NM_001114394 PAPD4 1 11.61 12.49 72 7.21 86.09 29 4.26 No 51 0.95 Yes 24 0.78 Yes -24 0.67 Yes 46 82.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 78914469 + NM_001114394 PAPD4 1 0.35 0.39 19 9.11 93.95 24 6.91 Yes 11 1.71 Yes 0 0 No -23 0.66 No 47 91.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 78915438 + NM_001114394 PAPD4 1 0.56 0.64 30 -1.62 0 35 5.47 No 17 0.18 No 0 0 No -30 0.46 No 41 48.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 78915573 + NM_001114394 PAPD4 1 0.16 0.19 11 3.88 73.35 42 9.69 Yes 29 1.46 Yes 0 0 No -41 0.47 No 29 52.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 78916389 + NM_001114394 PAPD4 1 0.11 0.19 10 11.07 84.67 24 5.48 No 11 0.97 Yes 23 0.91 Yes -23 0.75 Yes 47 82.47 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 78919077 + NM_001114394 PAPD4 1 0.83 1.56 51 -9.53 78.25 25 3.86 No 56 0.49 No 0 0 No -24 0.5 No 46 54.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 78920025 + NM_001114394 PAPD4 1 0.16 0.25 15 7.09 74.91 66 7.71 Yes 53 0.49 No 0 0 No -27 0.89 Yes 43 91.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 78937277 + NM_001114394 PAPD4 1 1.59 1.54 45 7.78 85.05 26 6.04 Yes 36 0.8 Yes 0 0 No -25 0.89 Yes 45 94.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78938666 + NM_001114394 PAPD4 1 77.22 74.32 72 9.65 0 22 4.58 No 9 0.5 No 31 0.38 Yes -21 0.73 Yes 49 58.21 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 78941965 + NM_001114394 PAPD4 1 0.7 0.9 43 8.74 86.1 42 5.5 No 49 1.38 Yes 0 0 No -27 0.82 Yes 43 79.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78943513 + NM_001114394 PAPD4 1 0.16 0.21 14 8.42 87.56 29 5.56 Yes 16 0.19 No 0 0 No -28 0.87 Yes 42 92.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 78944866 + NM_001114394 PAPD4 1 0.06 0.14 7 3.79 68.77 21 6.06 Yes 8 1.25 Yes 29 0.82 Yes -21 0.72 Yes 49 83.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 78950390 + NM_001114394 PAPD4 1 0.06 0.14 9 9.62 87.65 16 5.61 Yes 67 -4.82 No 0 0 No -23 0.54 No 47 80.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 78954200 + NM_001114394 PAPD4 1 0.1 0.18 12 9.98 87 24 6.53 Yes 24 0.99 Yes 0 0 No -23 0.89 Yes 47 90.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 78956623 + NM_001114394 PAPD4 1 0.33 0.65 29 5.93 65.69 21 5.64 Yes 43 0.42 No 0 0 No -20 0.78 Yes 50 77.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 78977792 + NM_001114394 PAPD4 1 0.08 0.14 8 0.8 0 22 4.91 No 9 0.8 Yes 22 0.64 Yes -24 0.64 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 50257142 + NM_001040284 PAPD5 1 0.25 0.19 11 8.42 82.74 28 7.07 Yes 68 0.35 No 0 0 No -23 0.52 No 48 36.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 50259149 + NM_001040284 PAPD5 1 36.68 22.33 72 6.83 79.27 25 5.88 Yes 2 0.01 No 28 0.78 Yes -24 0.43 No 42 44.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 6729214 + NM_001171805 PAPD7 1 0.6 0.11 8 9.71 88.96 35 5.87 Yes 22 0.38 No 0 0 No -23 0.45 No 47 57.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 6736473 + NM_001171805 PAPD7 1 0.42 0.11 7 8.18 85.54 38 5.45 No 11 1.95 Yes 0 0 No -23 0.94 Yes 47 93.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 6737497 + NM_001171805 PAPD7 1 0.4 0.1 7 8.63 94.03 30 5.38 No 17 0.28 No 0 0 No -29 0.54 No 44 71.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 6737675 + NM_001171805 PAPD7 1 0.56 0.13 8 4.74 76.6 34 6.29 Yes 72 1.19 Yes 0 0 No -33 0.43 No 37 75.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 6738801 + NM_001171805 PAPD7 1 0.14 0.13 7 2.45 0 9 3.87 No 65 -4.38 No 0 0 No -28 0.73 Yes 42 73.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 6739852 + NM_001171805 PAPD7 1 0.16 0.13 9 -0.44 0 11 4.12 No 17 1.82 Yes 0 0 No -29 0.88 Yes 41 90.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 6746073 + NM_001171805 PAPD7 1 0.83 0.43 20 7.1 90.85 22 4.99 No 9 0.29 No 29 0.48 Yes -21 0.87 Yes 49 92.24 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 6749677 + NM_001171805 PAPD7 1 0.58 0.24 15 2.65 0 18 3.43 No 40 1.48 Yes 0 0 No -32 0.52 No 18 51.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 6750447 + NM_001171805 PAPD7 1 0.31 0.18 12 1.85 0 28 5.48 No 15 1.17 Yes 0 0 No -27 0.93 Yes 43 93.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 6752990 + NM_001171805 PAPD7 1 0.4 0.24 16 2.48 0 19 5.53 No 34 1.36 Yes 0 0 No -31 0.81 Yes 39 92.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 6753038 + NM_001171805 PAPD7 1 0.78 0.43 25 9.55 89.43 30 5.57 Yes 54 0.84 Yes 0 0 No -29 0.77 Yes 41 71.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 96998674 + NM_001293628 PAPOLA 1 0.03 0.21 13 -0.27 0 13 4 No 70 1.4 Yes 0 0 No -12 0.55 No 48 14.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 96998874 + NM_001293628 PAPOLA 1 0.03 0.17 9 5.89 72.74 36 5.74 Yes 46 2.22 Yes 0 0 No -58 0.59 No 12 77.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 97003327 + NM_001293628 PAPOLA 1 0.36 1.61 54 5.82 87.47 22 4.89 No 68 0 No 0 0 No -21 0.84 Yes 49 81.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 97008557 + NM_001293628 PAPOLA 1 0.05 0.19 11 -0.51 49.1 15 5.38 No 54 0.43 No 27 0.36 Yes -22 0.27 No 19 37.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 97009096 + NM_001293628 PAPOLA 1 0.04 0.14 7 1.74 67.63 26 6.05 Yes 13 0.83 Yes 22 0.87 Yes -25 0.85 Yes 45 79.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 97014134 + NM_001293628 PAPOLA 1 0.02 0.1 7 -17.4 0 55 6.36 Yes 42 1.08 Yes 0 0 No -41 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 97020282 + NM_001293628 PAPOLA 1 0.17 0.65 29 7.69 80.68 58 8 Yes 45 0.49 No 0 0 No -18 0.76 Yes 52 78.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 97022186 + NM_001293628 PAPOLA 1 9.81 36.71 72 6.47 94.37 20 6 Yes 52 1.07 Yes 0 0 No -31 0.47 No 43 40.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 61012851 + NM_022894 PAPOLG 1 1.77 0.56 31 11.63 91.99 28 7.68 Yes 15 1.49 Yes 0 0 No -27 0.9 Yes 43 92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61021108 + NM_022894 PAPOLG 1 2.19 1.01 40 3.07 75.69 33 6 Yes 13 0.54 No 0 0 No -32 0.48 No 38 54.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61022424 + NM_022894 PAPOLG 1 0.16 0.1 7 5.95 84.22 25 6.25 Yes 12 1.58 Yes 24 0.93 Yes -24 0.89 Yes 46 87.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 108551754 - NM_005443 PAPSS1 1 0.25 0.28 17 7.65 82.56 27 6.02 Yes 14 0.34 No 0 0 No -26 0.67 Yes 44 68.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 108576193 - NM_005443 PAPSS1 1 0.95 0.83 40 10.84 96.56 40 6.19 Yes 27 2.14 Yes 0 0 No -34 0.83 Yes 36 86.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 108592020 - NM_005443 PAPSS1 1 1.71 2.03 39 6.83 81.33 55 5.98 Yes 19 1.27 Yes 0 0 No -23 0.8 Yes 47 81.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 108639553 - NM_005443 PAPSS1 1 0.45 0.28 18 7.54 95.08 26 5.67 Yes 7 0.32 No 25 0.4 Yes -25 0.47 No 51 36.62 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 79843576 - NM_001040202 PAQR3 1 3.04 0.56 29 3.89 71.39 37 7.15 Yes 75 1.57 Yes 24 0.82 Yes -36 0.52 No 34 54.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 79843649 - NM_001040202 PAQR3 1 0.95 0.17 11 7.92 91.57 15 5.9 Yes 2 1.65 Yes 0 0 No -23 0.7 Yes 47 85.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26193002 - NM_178422 PAQR7 1 0.85 0.24 16 7.83 85.08 31 6.84 Yes 18 0.62 No 0 0 No -33 0.65 No 37 67.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 52238345 + NM_133367 PAQR8 1 3.77 0.32 19 10.6 87.34 60 6.79 Yes 47 1.31 Yes 34 0.58 Yes -34 0.8 Yes 36 80.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 34591358 - NM_019619 PARD3 1 1.03 0.18 12 8.54 90.91 27 6.02 Yes 14 1.78 Yes 0 0 No -26 0.81 Yes 44 92.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 34601311 - NM_019619 PARD3 1 219.09 28.43 72 7.43 78.78 32 8.25 Yes 19 1.93 Yes 31 0.89 Yes -31 0.81 Yes 39 92.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 34625169 - NM_019619 PARD3 1 0.39 0.15 8 2.04 74.11 30 6.01 Yes 17 1.1 Yes 0 0 No -29 0.77 Yes 41 84.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 34732999 - NM_019619 PARD3 1 0.62 0.31 16 11.03 85.91 33 4.8 No 26 1.62 Yes 0 0 No -27 0.5 No 50 53.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 34782292 - NM_019619 PARD3 1 0.28 0.29 14 4.19 69.55 26 4.31 No 10 0.78 Yes 0 0 No -26 0.43 No 45 57.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 34782654 - NM_019619 PARD3 1 0.1 0.13 7 2.56 0 38 7.62 Yes 25 1 Yes 0 0 No -38 0.65 No 30 73.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 34804586 - NM_019619 PARD3 1 0.25 0.24 11 9.11 83.53 34 6.92 Yes 47 0.16 No 0 0 No -33 0.81 Yes 37 93.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 34834217 - NM_019619 PARD3 1 0.22 0.11 7 8.47 79.45 15 5.11 No 2 2.05 Yes 0 0 No -22 0.58 No 48 71.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 34872789 - NM_019619 PARD3 1 0.17 0.13 8 7.88 85.31 37 6.99 Yes 14 1.48 Yes 0 0 No -26 0.61 No 44 83.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 51027538 - NM_001303489 PARG 1 0.17 0.15 10 -8.66 74.32 20 7.74 Yes 7 2.21 Yes 0 0 No -35 0.53 No 34 71.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 51035615 - NM_001303489 PARG 1 0.36 0.18 13 13.4 91.42 40 7.3 Yes 49 1.06 Yes 0 0 No -39 0.92 Yes 31 91.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 51081119 - NM_001303489 PARG 1 0.69 0.31 16 13.85 93.86 26 7.15 Yes 13 2.65 Yes 0 0 No -25 0.76 Yes 45 91.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 51086184 - NM_001303489 PARG 1 0.64 0.32 18 9.51 92.56 13 5.9 Yes 0 1.61 Yes 0 0 No -28 0.96 Yes 42 95.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 51116588 - NM_001303489 PARG 1 0.29 0.21 14 7.27 82.87 19 5.47 No 6 1.68 Yes 0 0 No -23 0.85 Yes 47 87.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 51121246 - NM_001303489 PARG 1 0.17 0.11 8 5.48 76.3 38 8.63 Yes 25 0.76 No 0 0 No -37 0.49 No 33 65.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 8024058 + NM_007262 PARK7 1 0.01 0.15 10 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -17 0.49 No 53 79.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 8024061 + NM_007262 PARK7 1 0.02 0.19 12 4.4 80.12 21 7.21 Yes 8 1.21 Yes 0 0 No -20 0.8 Yes 50 87.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8029144 + NM_007262 PARK7 1 0.06 0.79 35 11.94 95.97 34 7.42 Yes 46 -1.48 No 21 0.31 Yes -21 0.66 No 39 57.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 8037741 + NM_007262 PARK7 1 0.01 0.13 9 5.09 63.57 39 5.59 Yes 42 0.16 No 0 0 No -54 0.62 No 16 75.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 8044923 + NM_007262 PARK7 1 0.05 0.83 36 -0.68 0 15 4.12 No 17 1.02 Yes 29 0.6 Yes -29 0.41 No 41 75.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 183551614 - NM_001324437 PARL 1 783.68 126.42 72 9.05 85.26 35 6.4 Yes 22 0.66 No 34 0.58 Yes -34 0.82 Yes 36 56.37 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 183551627 - NM_001324437 PARL 1 1.72 0.28 16 2.41 0 22 5.29 No 9 0.56 No 34 0.58 Yes -21 0.75 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 183560173 - NM_001324437 PARL 1 4.81 2.07 55 4.02 77.59 25 4.9 No 16 0.73 No 25 0.66 Yes -28 0.71 Yes 46 69.57 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 183560234 - NM_001324437 PARL 1 0.32 0.14 7 1.18 82.2 33 5.3 No 17 0.22 No 0 0 No -26 0.46 No 44 54.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 183560236 - NM_001324437 PARL 1 362.35 145.14 72 11.15 83.29 31 5.14 No 15 0.21 No 27 0.77 Yes -24 0.45 No 46 51.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 183560236 - NM_001324437 PARL 1 0.71 0.28 12 11.15 83.29 31 5.14 No 15 0.21 No 27 0.77 Yes -24 0.45 No 46 51.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 183574340 - NM_001324437 PARL 1 0.94 1.43 51 7.71 94.15 15 3.8 No 59 0.09 No 0 0 No -31 0.77 Yes 39 80.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 183584547 - NM_001324437 PARL 1 0.09 0.19 13 -0.37 0 14 4 No 6 0.89 Yes 0 0 No -27 0.63 No 43 51.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 14530626 - NM_002582 PARN 1 0.43 0.83 33 -2.76 0 30 7.81 Yes 17 0.56 No 0 0 No -29 0.94 Yes 41 94.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 14555128 - NM_002582 PARN 1 0.2 0.38 22 12 92.6 21 8.04 Yes 8 1.6 Yes 0 0 No -25 0.67 Yes 45 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14555692 - NM_002582 PARN 1 1.26 2.22 59 7.96 86.3 26 5.88 Yes 46 0.35 No 0 0 No -25 0.61 No 45 70.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 14576242 - NM_002582 PARN 1 0.37 0.68 34 4.19 0 23 5.62 Yes 65 -4.05 No 0 0 No -28 0.65 No 42 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 14576246 - NM_002582 PARN 1 0.12 0.21 13 -0.14 84.41 19 5.27 No 61 -4.04 No 0 0 No -24 0.65 No 46 81.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 14578508 - NM_002582 PARN 1 0.11 0.25 15 12.25 81.03 29 5.57 Yes 16 1.08 Yes 0 0 No -28 0.96 Yes 42 96.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14625032 - NM_002582 PARN 1 0.15 0.32 20 8.32 82.11 23 5.53 No 10 1.21 Yes 0 0 No -22 0.81 Yes 48 83.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14634805 - NM_002582 PARN 1 0.04 0.1 7 6.53 83.64 39 6.44 Yes 26 1.47 Yes 0 0 No -32 0.69 Yes 43 69.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14647108 - NM_002582 PARN 1 0.05 0.11 7 8.98 86.43 51 7.31 Yes 38 1.62 Yes 0 0 No -38 0.85 Yes 32 86.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14652347 - NM_002582 PARN 1 0.26 0.54 27 2.9 0 22 7.63 Yes 9 1.53 Yes 25 0.7 Yes -25 0.55 No 45 58.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 14656443 - NM_002582 PARN 1 0.05 0.11 7 9.02 92.83 26 5.9 Yes 69 0.91 Yes 0 0 No -26 0.54 No 50 64.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 14664835 - NM_002582 PARN 1 0.08 0.13 9 4.15 0 37 7.38 Yes 24 1.42 Yes 0 0 No -36 0.77 Yes 34 79.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14664839 - NM_002582 PARN 1 0.06 0.13 8 0.5 81.36 33 7.17 Yes 20 1.44 Yes 0 0 No -32 0.75 Yes 38 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14670134 - NM_002582 PARN 1 1.77 3.35 66 7.56 77.83 39 6.16 Yes 71 -2.76 No 31 0.44 Yes -33 0.54 No 37 80.06 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 14672486 - NM_002582 PARN 1 0.28 0.54 32 5.41 90.92 28 5.63 Yes 3 0.8 Yes 27 0.72 Yes -27 0.61 No 43 49.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 14672511 - NM_002582 PARN 1 0.14 0.26 15 4.09 83.95 36 6.48 Yes 23 0.13 No 27 0.72 Yes -33 0.45 No 37 51.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 14673837 - NM_002582 PARN 1 0.19 0.43 26 4.56 84.41 29 5.46 No 22 0.69 No 0 0 No -28 0.69 Yes 42 68.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 14676148 - NM_002582 PARN 1 0.1 0.31 17 -9.86 0 30 6 Yes 33 0.59 No 0 0 No -29 0.83 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 14685868 - NM_002582 PARN 1 0.33 0.88 35 7.15 89.09 14 4.69 No 65 1.91 Yes 0 0 No -51 0.8 Yes 19 97.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14685891 - NM_002582 PARN 1 0.33 0.88 33 3.36 84.41 29 9.25 Yes 42 1.91 Yes 0 0 No -28 0.93 Yes 42 97.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14694764 - NM_002582 PARN 1 0.35 0.63 30 5.5 90.92 28 5.29 No 55 -0.59 No 0 0 No -27 0.66 No 43 64.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 14698081 - NM_002582 PARN 1 0.36 0.63 32 3.38 78.95 15 6.48 Yes 67 0.03 No 0 0 No -25 0.57 No 45 57.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 14701680 - NM_002582 PARN 1 0.06 0.13 8 10.85 94.4 34 6.27 Yes 52 0.57 No 0 0 No -24 0.69 Yes 36 64.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 14717811 - NM_002582 PARN 1 0.21 0.35 19 12.84 96.37 50 5.23 No 43 1.26 Yes 0 0 No -49 0.67 Yes 21 70.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 14720994 - NM_002582 PARN 1 0.64 1.06 40 4.11 65.06 32 4.93 No 62 1.25 Yes 31 0.81 Yes -31 0.52 No 38 51.74 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 14721032 - NM_002582 PARN 1 0.23 0.36 21 -3.99 56.36 21 4.69 No 24 1.24 Yes 31 0.81 Yes -36 0.62 No 34 84.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 226552854 - NM_001618 PARP1 1 0.08 0.69 30 -13.85 0 49 7.68 Yes 36 1.04 Yes 0 0 No -48 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 226567864 - NM_001618 PARP1 1 0.04 0.24 14 -5.48 66.39 42 7.49 Yes 29 0.78 Yes 0 0 No -41 0.7 Yes 29 75.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145051965 - NR_134234 PARP10 1 0.17 0.22 14 3.33 85.36 26 5.1 No 46 2.43 Yes 0 0 No -58 0.49 No 12 29.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145055209 - NR_134234 PARP10 1 0.19 0.24 11 9.01 88.36 43 5.64 Yes 11 0.41 No 0 0 No -23 0.45 No 28 37.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145059491 - NR_134234 PARP10 1 0.13 0.18 11 -0.1 0 9 3.52 No 25 1.62 Yes 0 0 No -37 0.95 Yes 33 95.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145059535 - NR_134234 PARP10 1 0.11 0.17 12 11.8 86.52 19 5.47 No 30 -1.09 No 31 0.96 Yes -18 0.77 Yes 52 53.73 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 145060289 - NR_134234 PARP10 1 0.15 0.21 12 -11.64 71.28 35 6.95 Yes 22 1.68 Yes 0 0 No -34 0.91 Yes 36 41.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 3921240 - NM_001286522 PARP11 1 4.27 0.94 41 9.5 98.06 26 4.9 No 38 0.74 No 25 0.84 Yes -25 0.86 Yes 45 79.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 3933843 - NM_001286522 PARP11 1 1.35 0.49 30 8.25 89.68 30 6.83 Yes 17 0.45 No 0 0 No -24 0.46 No 41 66.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 3968089 - NM_001286522 PARP11 1 0.43 0.1 7 7.08 86.43 27 7.62 Yes 14 1.36 Yes 0 0 No -26 0.92 Yes 44 95.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 139733882 - NM_022750 PARP12 1 1.37 0.9 38 7.28 80.11 20 6.53 Yes 7 0.03 No 29 0.57 Yes -31 0.72 Yes 41 78.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 139737762 - NM_022750 PARP12 1 1.05 0.49 27 8.75 86.81 72 9.05 Yes 59 0.84 Yes 0 0 No -26 0.6 No 35 61.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 139738112 - NM_022750 PARP12 1 1.13 0.65 29 -0.77 70.35 23 4.06 No 69 0.19 No 0 0 No -23 0.62 No 47 25.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 139741561 - NM_022750 PARP12 1 0.21 0.19 11 2.96 74.82 48 6.03 Yes 35 0.87 Yes 34 0.13 Yes -26 0.75 Yes 44 53.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 139753813 - NM_022750 PARP12 1 0.39 0.31 14 10.77 90.51 32 8.17 Yes 60 0.55 No 0 0 No -31 0.61 No 39 58.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 139757574 - NM_022750 PARP12 1 7.71 6.11 69 8.45 88.7 27 7.44 Yes 14 1.14 Yes 26 0.82 Yes -26 0.88 Yes 44 94.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 122405498 + NM_017554 PARP14 1 0.1 0.32 19 8.35 87.82 28 7.44 Yes 15 1.46 Yes 0 0 No -27 0.94 Yes 43 95.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122410108 + NM_017554 PARP14 1 0.92 3.14 63 8.27 89.85 37 7.82 Yes 24 1.92 Yes 0 0 No -36 0.51 No 34 85.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 122418242 + NM_017554 PARP14 1 0.07 0.46 24 -0.67 0 9 3.52 No 21 0.85 Yes 0 0 No -33 0.91 Yes 37 96.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122420192 + NM_017554 PARP14 1 0.06 0.35 19 7.79 82.59 25 5.2 No 70 0.73 No 0 0 No -20 0.61 No 42 70.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 122424136 + NM_017554 PARP14 1 0.69 1.81 53 8.59 92.98 30 10.94 Yes 17 1.59 Yes 0 0 No -29 0.76 Yes 41 70.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122432111 + NM_017554 PARP14 1 0.2 0.56 17 9.88 91.72 20 7.44 Yes 60 2.09 Yes 0 0 No -27 0.47 No 43 58.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 122433113 + NM_017554 PARP14 1 0.31 0.78 31 1.2 0 36 9.48 Yes 23 1.48 Yes 0 0 No -35 0.75 Yes 35 87.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122433224 + NM_017554 PARP14 1 0.03 0.1 7 8.43 93.2 20 5.08 No 20 0.39 No 0 0 No -19 0.73 Yes 51 61.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 122439674 + NM_017554 PARP14 1 0.14 0.35 18 5.76 85.69 21 4.91 No 74 0.23 No 20 0.46 Yes -20 0.4 No 34 49.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 122439934 + NM_017554 PARP14 1 1.31 3.19 66 11.49 97.68 22 6.79 Yes 9 1.38 Yes 0 0 No -21 0.63 No 49 76.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 122335932 + NM_152615 PARP15 1 3.02 1.46 51 8.1 89.1 25 6.13 Yes 38 1.22 Yes 24 0.33 Yes -28 0.36 No 46 40.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 122340326 + NM_152615 PARP15 1 0.26 0.13 8 4.29 78.83 25 5.2 No 12 0.78 Yes 0 0 No -24 0.95 Yes 46 95.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122339265 + NM_152615 PARP15 1 1.37 0.72 31 6.86 84 38 6.44 Yes 74 1.47 Yes 0 0 No -32 0.45 No 33 46.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 20822993 + NM_005484 PARP2 1 2.99 2.86 66 -3.3 60.53 19 4.8 No 6 0.07 No 18 0.96 Yes -18 0.82 Yes 52 35.22 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 20822997 + NM_005484 PARP2 1 0.92 0.89 38 -2.51 0 23 5.2 No 38 -2.07 No 0 0 No -22 0.78 Yes 48 43.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 51981197 + NM_001003931 PARP3 1 0.48 0.1 7 2.55 0 21 4.46 No 70 -5.35 No 0 0 No -20 0.81 Yes 50 85.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 51982287 + NM_001003931 PARP3 1 0.62 0.17 9 -3.55 0 22 4.56 No 57 -2.63 No 26 0.78 Yes -21 0.75 Yes 49 62.71 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 51982430 + NM_001003931 PARP3 1 1.44 0.4 20 3.48 81.8 22 4.96 No 74 -1.68 No 0 0 No -21 0.94 Yes 52 77.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25006835 - NM_006437 PARP4 1 0.64 1.11 42 9.28 92.53 35 3.81 No 30 0.24 No 0 0 No -28 0.88 Yes 42 95.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25008720 - NM_006437 PARP4 1 0.07 0.13 8 6.9 77.64 25 5.87 Yes 36 -1.65 No 0 0 No -24 0.46 No 46 59.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 25009603 - NM_006437 PARP4 1 0.08 0.17 9 1.49 0 19 4.36 No 55 1.02 Yes 0 0 No -31 0.49 No 39 69.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 25030631 - NM_006437 PARP4 1 0.33 0.43 9 -2.19 0 38 6.83 Yes 3 1.68 Yes 29 0.93 Yes -37 0.29 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 25034202 - NM_006437 PARP4 1 0.07 0.11 7 3.2 78.85 31 4.79 No 18 0.51 No 0 0 No -22 0.79 Yes 48 92.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25043052 - NM_006437 PARP4 1 0.12 0.21 11 6.44 79.88 22 3.83 No 48 -5.06 No 0 0 No -21 0.84 Yes 49 87.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25054202 - NM_006437 PARP4 1 0.08 0.21 11 6.18 83.89 26 5.48 No -4 0.84 Yes 0 0 No -25 0.59 No 45 63.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 25056427 - NM_006437 PARP4 1 0.66 1.64 52 4.47 86.42 35 4.71 No 48 0.51 No 0 0 No -29 0.55 No 46 48.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 25057111 - NM_006437 PARP4 1 0.05 0.13 9 1.56 69.17 24 5.29 No 52 -4.55 No 0 0 No -23 0.83 Yes 47 80.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 25059022 - NM_006437 PARP4 1 0.07 0.14 8 0.76 0 30 5.48 No 64 0.27 No 0 0 No -29 0.48 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 25060419 - NM_006437 PARP4 1 0.05 0.11 8 5.67 81.44 24 4.8 No 70 1.27 Yes 0 0 No -50 0.38 No 15 42.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 25061093 - NM_006437 PARP4 1 0.13 0.25 15 3.5 0 22 7 Yes 9 1.38 Yes 0 0 No -21 0.68 Yes 48 60.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 25062423 - NM_006437 PARP4 1 0.07 0.15 10 9.38 78.02 39 7.48 Yes 0 1.45 Yes 0 0 No -38 0.57 No 32 77.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 25074518 - NM_006437 PARP4 1 0.17 0.33 19 -0.55 72.81 34 6 Yes 21 0.32 No 0 0 No -30 0.48 No 41 54.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 25075860 - NM_006437 PARP4 1 0.08 0.19 10 3.52 72.74 30 4.15 No 61 -3.53 No 0 0 No -30 0.59 No 40 44.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 25077167 - NM_006437 PARP4 1 0.05 0.11 7 2.42 59.31 48 5.44 No 25 1.45 Yes 0 0 No -37 0.65 No 33 48.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 25080495 - NM_006437 PARP4 1 2.05 2.44 65 8.95 86.29 12 5.57 Yes 71 -2.09 No 0 0 No -25 0.53 No 45 65.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 72534634 - NM_001323515 PARP6 1 0.26 0.1 7 3.99 74.33 22 6.32 Yes 9 1.57 Yes 0 0 No -21 0.83 Yes 49 75.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72543296 - NM_001323515 PARP6 1 349.84 33.5 72 -0.86 66.41 52 6.12 Yes 73 2.14 Yes 22 0.89 Yes -51 0.83 Yes 19 92.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 72546412 - NM_001323515 PARP6 1 1.44 0.58 28 9.98 88.74 20 5.82 Yes 51 -2.5 No 27 0.55 Yes -31 0.44 No 53 57.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 72546859 - NM_001323515 PARP6 1 0.37 0.19 10 -2.33 70.2 58 7.55 Yes 45 1.34 Yes 26 0.34 Yes -57 0.66 Yes 13 79.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 50011464 + NM_001178055 PARP8 1 1.03 0.97 44 7.57 85.81 44 7.47 Yes 4 0.1 No 0 0 No -31 0.56 No 27 46.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 50034813 + NM_001178055 PARP8 1 0.2 0.17 9 3.15 80.25 25 5.57 Yes 22 1.75 Yes 24 0.86 Yes -24 0.87 Yes 46 88.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 50037664 + NM_001178055 PARP8 1 0.33 0.31 17 12.88 92.63 46 6.93 Yes 56 0.59 No 39 0.12 Yes -43 0.57 No 25 49.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 50040569 + NM_001178055 PARP8 1 1.4 1.36 54 11.49 87.24 26 5.57 Yes 13 0.95 Yes 25 0.86 Yes -25 0.9 Yes 45 89.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 50052952 + NM_001178055 PARP8 1 3.33 2.9 64 3.07 78.19 24 4.08 No 18 -0.82 No 23 0.88 Yes -23 0.9 Yes 47 95.68 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 50056184 + NM_001178055 PARP8 1 0.12 0.1 7 0.49 62.77 36 5.74 Yes 23 1.52 Yes 0 0 No -35 0.51 No 35 52.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 50084379 + NM_001178055 PARP8 1 0.16 0.19 9 9.78 86.84 12 4.61 No -1 1.22 Yes 0 0 No -47 0.85 Yes 23 60.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 50084783 + NM_001178055 PARP8 1 0.11 0.13 7 10.21 85.64 23 6 Yes 10 1.14 Yes 0 0 No -22 0.97 Yes 48 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 50090498 + NM_001178055 PARP8 1 1.25 1.39 51 12.79 99.45 24 5.48 No 49 -2.79 No 0 0 No -23 0.96 Yes 47 84.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 50120722 + NM_001178055 PARP8 1 0.09 0.11 7 -6.03 43.5 52 8.77 Yes 39 1.12 Yes 25 0.59 Yes -23 0.38 No 19 18.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 50130675 + NM_001178055 PARP8 1 0.54 0.6 31 8.91 86.42 26 5.38 No 70 1.05 Yes 25 0.94 Yes -25 0.89 Yes 45 91.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 122259709 - NM_001146106 PARP9 1 0.3 0.38 21 3.46 76.73 18 5.57 Yes 35 -0.79 No 26 0.19 Yes -25 0.57 No 45 75.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 122260777 - NM_001146106 PARP9 1 0.06 0.1 7 8.19 82.52 34 4.33 No 3 0.45 No 0 0 No -33 0.82 Yes 37 80.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 122265216 - NM_001146106 PARP9 1 1.42 1.56 51 0.87 79.08 37 5.28 No 42 1.56 Yes 0 0 No -20 0.85 Yes 50 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122269448 - NM_001146106 PARP9 1 0.13 0.18 10 10.4 82.98 29 6.29 Yes 50 -5.02 No 28 0.85 Yes -28 0.94 Yes 42 94.57 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 122271483 - NM_001146106 PARP9 1 0.16 0.18 12 5.52 0 37 6.8 Yes 18 0.96 Yes 0 0 No -36 0.7 Yes 34 83.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 122274828 - NM_001146106 PARP9 1 0.38 0.29 17 7.23 83.94 34 6.32 Yes 62 -4.39 No 0 0 No -33 0.53 No 37 62.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 122274967 - NM_001146106 PARP9 1 1.31 0.93 36 0.81 78.65 64 5.87 Yes 51 1.04 Yes 0 0 No -21 0.73 Yes 49 30.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 122278554 - NM_001146106 PARP9 1 3.33 0.47 25 -1.04 74.99 37 7.41 Yes 24 1.57 Yes 0 0 No -36 0.55 No 34 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 102544041 + NM_001319993 PARPBP 1 1.13 0.74 35 8.57 85.74 20 5.89 Yes 7 1.44 Yes 27 0.81 Yes -27 0.57 No 43 63.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 102544779 + NM_001319993 PARPBP 1 0.27 0.17 11 6.72 83.58 36 5.58 Yes 60 0.6 No 0 0 No -24 0.58 No 47 72.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 102545347 + NM_001319993 PARPBP 1 3.44 2.31 59 7.14 81.67 14 4.24 No 29 1.41 Yes 24 0.64 Yes -24 0.67 Yes 49 61.43 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 102548604 + NM_001319993 PARPBP 1 7.29 4.57 67 10.16 94.7 22 5.72 Yes 5 1.11 Yes 21 0.79 Yes -21 0.74 Yes 49 56.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 102560886 + NM_001319993 PARPBP 1 6.13 1.97 64 7.13 86.26 33 4.97 No 20 0.65 No 0 0 No -32 0.68 Yes 38 83.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 102571635 + NM_001319993 PARPBP 1 2.15 0.64 27 7.51 86.05 39 6.13 Yes 21 1.2 Yes 0 0 No -33 0.86 Yes 37 69.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 44513849 + NM_001243385 PARVB 1 0.1 0.31 21 9.99 84.67 15 5 No 75 0.61 No 0 0 No -23 0.22 No 47 46.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 44515668 + NM_001243385 PARVB 1 0.07 0.26 13 4.08 74.77 30 5.74 Yes 66 0.1 No 29 0.85 Yes -29 0.8 Yes 41 56.74 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 44527367 + NM_001243385 PARVB 1 0.05 0.19 10 -13.98 0 31 6.93 Yes 18 2.47 Yes 0 0 No -30 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 44532340 + NM_001243385 PARVB 1 0.03 0.13 8 -12.22 0 31 8.25 Yes 18 1.03 Yes 29 0.84 Yes -30 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 44537438 + NM_001243385 PARVB 1 0.15 0.46 28 7.12 86.54 22 5.22 No 76 0.81 Yes 0 0 No -21 0.85 Yes 49 67.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 44545136 + NM_001243385 PARVB 1 0.23 0.89 35 8.88 78.6 24 5.48 No 11 0.74 No 0 0 No -23 0.73 Yes 47 85.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 44547241 + NM_001243385 PARVB 1 0.03 0.14 9 6.86 83.4 29 4.34 No 52 -2.98 No 0 0 No -28 0.64 No 42 62.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 44547364 + NM_001243385 PARVB 1 0.04 0.18 8 -23.84 0 34 8.12 Yes 21 0.98 Yes 0 0 No -33 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 44553368 + NM_001243385 PARVB 1 0.2 0.75 38 12.32 90.02 31 5.92 Yes 51 0.92 Yes 0 0 No -30 0.66 Yes 42 75.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 44556323 + NM_001243385 PARVB 1 0.09 0.39 21 6.56 87.97 23 5.12 No 7 -2.15 No 0 0 No -22 0.76 Yes 48 66.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 44563878 + NM_001243385 PARVB 1 0.03 0.14 8 7.64 81.71 31 6.4 Yes 18 1.69 Yes 30 0.78 Yes -30 0.69 Yes 40 82.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 44564251 + NM_001243385 PARVB 1 0.03 0.13 7 9.57 91.7 14 5.38 No 38 0.2 No 0 0 No -25 0.62 No 45 76.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 44564267 + NM_001243385 PARVB 1 0.14 0.67 30 9.44 87.43 24 5 No 11 0.44 No 0 0 No -23 0.67 Yes 47 86.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 44564460 + NM_001243385 PARVB 1 0.51 2.39 67 -1.15 65.04 26 5.2 No 52 -3.78 No 24 0.89 Yes -25 0.83 Yes 54 35.31 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 44578418 + NM_001137605 PARVG 1 0.5 0.54 32 10.37 82.01 21 5.57 Yes 8 0.59 No 0 0 No -20 0.56 No 46 56.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 44579121 + NM_001137605 PARVG 1 0.93 1.03 45 12.33 94.21 22 5.43 No 33 1.66 Yes 0 0 No -21 0.57 No 49 76.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 44579469 + NM_001137605 PARVG 1 1.55 1.83 52 5.69 76.77 27 7.91 Yes 50 2.19 Yes 26 0.92 Yes -26 0.66 No 44 84.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 44579491 + NM_001137605 PARVG 1 0.12 0.18 8 5.5 89.07 19 5 No 72 2.18 Yes 0 0 No -24 0.76 Yes 46 57.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 44579957 + NM_001137605 PARVG 1 1.98 2.58 62 8.36 80.9 14 4.73 No 51 0.58 No 0 0 No -23 0.71 Yes 47 55.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 44579960 + NM_001137605 PARVG 1 0.47 0.79 29 -8.51 73.09 17 4.96 No 54 0.57 No 0 0 No -26 0.7 Yes 44 42.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 44582456 + NM_001137605 PARVG 1 2.71 2.81 59 6.06 74.62 35 9.05 Yes 22 2 Yes 34 0.88 Yes -34 0.75 Yes 36 83.01 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 44582563 + NM_001137605 PARVG 1 0.32 0.29 17 7.72 88.27 20 5.1 No 19 1.06 Yes 0 0 No -19 0.93 Yes 51 85.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 44583634 + NM_001137605 PARVG 1 1 0.9 42 2.14 67.23 24 5.2 No 73 -3.75 No 26 0.46 Yes -21 0.6 No 49 56.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 44583648 + NM_001137605 PARVG 1 0.56 0.44 24 -3.64 76.61 19 4.67 No 25 -0.35 No 26 0.46 Yes -27 0.3 No 51 33.96 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 44584995 + NM_001137605 PARVG 1 0.22 0.29 17 -6.3 72.9 24 6.32 Yes 11 1.65 Yes 0 0 No -23 0.97 Yes 47 95.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 44584964 + NM_001137605 PARVG 1 0.23 0.36 19 7.65 83.34 29 5.92 Yes 16 0.9 Yes 21 0.91 Yes -28 0.88 Yes 42 91.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 44588837 + NM_001137605 PARVG 1 0.69 0.82 34 5.52 83.86 19 7.26 Yes 6 0.92 Yes 0 0 No -18 0.82 Yes 52 86.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 44588976 + NM_001137605 PARVG 1 0.55 0.6 28 4.66 85.77 21 4.69 No 8 -0.11 No 0 0 No -20 0.82 Yes 50 91.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 44589685 + NM_001137605 PARVG 1 0.54 0.68 31 -3.46 0 39 8.36 Yes 26 1.44 Yes 0 0 No -38 0.85 Yes 32 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 44594485 + NM_001137605 PARVG 1 0.2 0.25 14 7.07 79.57 12 5.83 Yes -1 0.6 No 26 0.47 Yes -30 0.43 No 43 56.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 44601620 + NM_001137605 PARVG 1 0.24 0.35 20 5.73 72.91 42 5.46 No 64 -3.21 No 20 0.91 Yes -23 0.18 No 53 44.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 44601986 + NM_001137605 PARVG 1 0.73 0.78 33 1.87 70.97 29 5.66 Yes 16 -0.38 No 0 0 No -28 0.88 Yes 42 85.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242047710 - NM_001252119 PASK 1 1.28 1.25 42 0.37 0 11 3.87 No 14 1.86 Yes 0 0 No -26 0.8 Yes 44 88.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242048223 - NM_001252119 PASK 1 0.61 0.43 25 8.43 88.68 51 8.83 Yes 38 1.22 Yes 26 0.8 Yes -26 0.65 No 44 59.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 242063590 - NM_001252119 PASK 1 0.51 0.13 8 1.27 0 24 4.74 No 11 1.63 Yes 38 0.32 Yes -23 0.94 Yes 47 91.3 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 242063594 - NM_001252119 PASK 1 0.33 0.14 9 -3.75 0 20 4.33 No 7 1.64 Yes 0 0 No -19 0.93 Yes 51 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242074571 - NM_001252119 PASK 1 1.81 0.51 28 4.17 80.5 21 5.2 No 65 0.21 No 0 0 No -23 0.54 No 44 17.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 242075423 - NM_001252119 PASK 1 1.3 0.53 24 8.36 85.59 18 6.25 Yes 5 1.36 Yes 0 0 No -26 0.81 Yes 44 86.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242076597 - NM_001252119 PASK 1 0.44 0.13 7 -2.32 67.22 15 4.63 No 73 -3.04 No 0 0 No -21 0.79 Yes 49 64.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 242077398 - NM_001252119 PASK 1 0.9 0.11 7 7.65 85.25 16 5.21 No 3 1.24 Yes 0 0 No -24 0.69 Yes 46 79.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242079377 - NM_001252119 PASK 1 0.8 0.22 13 -0.5 0 23 5 No 10 1.23 Yes 0 0 No -22 0.96 Yes 48 95.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242080166 - NM_001252119 PASK 1 0.42 0.17 8 1.88 78.64 30 5.92 Yes 17 1.2 Yes 0 0 No -29 0.83 Yes 41 80.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242085276 - NM_001252119 PASK 1 1.83 0.42 21 5.83 85.4 22 4.14 No 9 0.38 No 21 0.86 Yes -26 0.59 No 49 84.87 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 62223081 + NM_176877 PATJ 1 0.74 0.1 7 3.25 0 30 6.76 Yes 43 0.25 No 0 0 No -29 0.94 Yes 41 94.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 62257024 + NM_176877 PATJ 1 2 0.19 12 2.62 0 30 3.93 No 27 0.47 No 0 0 No -30 0.32 No 41 51.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 62263888 + NM_176877 PATJ 1 0.35 0.13 7 8.3 86.87 31 6.71 Yes 62 1.64 Yes 0 0 No -26 0.49 No 44 74.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 62290116 + NM_176877 PATJ 1 1.51 0.6 28 12.13 88.27 27 10.1 Yes 14 1.84 Yes 0 0 No -26 0.77 Yes 44 82.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 62327226 + NM_176877 PATJ 1 0.35 0.11 8 -2.39 0 25 5.02 No 65 2.07 Yes 0 0 No -31 0.48 No 39 57.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 62330912 + NM_176877 PATJ 1 0.41 0.14 8 4.73 0 41 9.59 Yes 28 0.43 No 40 0.31 Yes -41 0.33 No 29 40.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 62336903 + NM_176877 PATJ 1 2.76 0.81 36 2.83 83.28 24 6.59 Yes 11 0.44 No 0 0 No -28 0.84 Yes 42 70.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 62456716 + NM_176877 PATJ 1 1.33 0.25 13 8.34 85.56 31 6.01 Yes 2 1.28 Yes 0 0 No -30 0.95 Yes 40 97.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 62457153 + NM_176877 PATJ 1 3.72 0.76 32 9.07 87.52 29 6.56 Yes 16 1.17 Yes 28 0.91 Yes -32 0.68 Yes 38 78.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 62479014 + NM_176877 PATJ 1 3.85 0.83 40 6.45 82.04 29 6.85 Yes 16 1.25 Yes 0 0 No -28 0.71 Yes 42 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 62565990 + NM_176877 PATJ 1 6.8 0.9 41 5.3 84.55 27 5.29 No 65 1.05 Yes 26 0.55 Yes -26 0.84 Yes 44 81.37 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 62619029 + NM_176877 PATJ 1 12.73 1.56 51 6.54 87.1 24 5.17 No 67 0.65 No 23 0.74 Yes -23 0.68 Yes 47 79.61 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 59409059 - NM_152716 PATL1 1 1.61 2.08 63 5.78 86.16 20 7.14 Yes 7 1.03 Yes 0 0 No -19 0.79 Yes 51 81.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 59410454 - NM_152716 PATL1 1 0.3 0.42 21 6.82 83.83 42 5.06 No 25 1.61 Yes 41 0.68 Yes -41 0.83 Yes 29 95.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 59415301 - NM_152716 PATL1 1 0.45 0.57 29 12.7 88.45 28 6.61 Yes 63 1.17 Yes 0 0 No -27 0.72 Yes 48 55.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 59415986 - NM_152716 PATL1 1 0.1 0.14 10 9.62 83.21 43 7.1 Yes 30 1.51 Yes 0 0 No -42 0.61 No 28 76.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 59420488 - NM_152716 PATL1 1 0.18 0.18 11 -1.58 0 26 7.68 Yes 31 0.33 No 0 0 No -25 0.62 No 46 40.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 59424098 - NM_152716 PATL1 1 1.13 1.19 48 -0.21 0 17 5.74 Yes 4 0.88 Yes 31 0.49 Yes -11 0.68 Yes 59 42.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 59424625 - NM_152716 PATL1 1 0.11 0.14 9 0.76 77.75 31 4.09 No 11 0.03 No 0 0 No -30 0.58 No 40 64.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 59424627 - NM_152716 PATL1 1 12.18 13.46 72 8.65 77.6 29 3.95 No 9 0.02 No 0 0 No -28 0.68 Yes 42 67.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 59424646 - NM_152716 PATL1 1 0.07 0.1 7 8.42 83.71 22 6.16 Yes 57 -2.61 No 0 0 No -28 0.87 Yes 42 75.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 59425156 - NM_152716 PATL1 1 0.12 0.18 9 3.98 81.55 20 5.1 No 63 0.66 No 0 0 No -22 0.83 Yes 48 88.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 59426929 - NM_152716 PATL1 1 0.29 0.32 16 0.09 75 19 3.94 No 57 0.53 No 0 0 No -37 0.65 No 33 94.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 59429958 - NM_152716 PATL1 1 0.17 0.19 10 5.52 80.09 23 6.47 Yes 2 0.72 No 0 0 No -22 0.85 Yes 48 86.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 31737670 - NM_014323 PATZ1 1 74.74 32.29 72 11.33 92.37 27 7.42 Yes 14 1.94 Yes 26 0.93 Yes -26 0.91 Yes 44 76.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 31740126 - NM_014323 PATZ1 1 0.23 0.19 12 11.54 90.05 24 5.48 No 11 1.02 Yes 0 0 No -23 0.8 Yes 47 90.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 79986494 - NM_002583 PAWR 1 0.46 0.39 18 -0.19 0 14 4.26 No 31 0.66 No 24 0.83 Yes -43 0.83 Yes 27 78.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 79987778 - NM_002583 PAWR 1 0.38 0.35 19 0.23 70.35 24 5.38 No 62 0.83 Yes 0 0 No -23 0.87 Yes 47 72.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 79987856 - NM_002583 PAWR 1 0.18 0.13 9 -3.44 68.98 38 7.06 Yes 55 0.87 Yes 0 0 No -33 0.66 No 33 72.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 80008392 - NM_002583 PAWR 1 1.86 1.61 51 4.38 79.17 17 4.98 No 4 1.37 Yes 0 0 No -22 0.61 No 48 54.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 80029401 - NM_002583 PAWR 1 0.72 0.31 16 7.47 88.21 34 3.83 No 75 -2.93 No 25 0.29 Yes -26 0.44 No 44 40.38 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 80062189 - NM_002583 PAWR 1 0.5 0.21 13 8.11 78.6 30 5.7 Yes -3 1.16 Yes 30 0.88 Yes -30 0.72 Yes 40 75.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 80082246 - NM_002583 PAWR 1 0.94 0.43 22 10.61 85.86 35 5.83 Yes 26 0.66 No 27 0.59 Yes -27 0.65 No 43 75.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 36966714 - NR_104000 PAX5 1 0.1 0.17 12 -3.8 0 16 4.12 No 60 2.24 Yes 0 0 No -35 0.77 Yes 35 82.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 36987177 - NR_104000 PAX5 1 0.07 0.14 9 11.4 87.18 13 6.92 Yes 0 0.26 No 0 0 No -42 0.36 No 28 50.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 36992896 - NR_104000 PAX5 1 0.08 0.15 10 8.8 91.62 16 4.72 No 3 0.42 No 0 0 No -25 0.47 No 45 61.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 37005962 - NR_104000 PAX5 1 0.07 0.15 10 -0.22 68.87 52 8.42 Yes 39 0.99 Yes 0 0 No -51 0.85 Yes 19 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37010278 - NR_104000 PAX5 1 0.06 0.17 10 2.75 61.61 34 4.5 No 15 1.43 Yes 0 0 No -27 0.56 No 43 89.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 37010336 - NR_104000 PAX5 1 0.18 0.56 27 5.01 72.12 23 4.75 No 76 -5.65 No 0 0 No -22 0.44 No 48 87.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 37014807 - NR_104000 PAX5 1 0.2 0.63 26 7.74 87.33 48 6.72 Yes 35 1.87 Yes 0 0 No -47 0.48 No 23 65.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 37016284 - NR_104000 PAX5 1 0.25 0.56 26 12.4 95.02 30 4.46 No 35 0.24 No 0 0 No -29 0.59 No 41 77.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 34110526 - NR_027873 PAXBP1 1 5.03 2.67 62 8.66 84.62 28 6.6 Yes 0 0.21 No 0 0 No -27 0.68 Yes 43 59.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 34113934 - NR_027873 PAXBP1 1 21.79 11.71 72 8.27 86.67 22 6.76 Yes 9 2 Yes 21 0.9 Yes -21 0.65 No 49 63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 34120560 - NR_027873 PAXBP1 1 1.43 0.85 38 6.6 86.57 14 4.85 No 1 0.58 No 0 0 No -25 0.75 Yes 50 54.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 34128680 - NR_027873 PAXBP1 1 0.89 0.61 33 10.42 90.31 30 5.32 No 36 0.44 No 29 0.63 Yes -29 0.58 No 36 74.73 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 154761799 - NM_007349 PAXIP1 1 0.19 0.14 8 6.85 84.26 25 6.42 Yes 12 0.83 Yes 0 0 No -32 0.77 Yes 38 83.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 154763290 - NM_007349 PAXIP1 1 0.15 0.11 7 9.39 92.08 26 5.49 No 66 0.62 No 0 0 No -25 0.47 No 45 76.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 154777890 - NM_007349 PAXIP1 1 8.06 5.96 71 9.49 93.12 24 5.83 Yes 11 1.96 Yes 23 0.83 Yes -27 0.84 Yes 47 84.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 154791866 - NM_007349 PAXIP1 1 1.78 0.51 26 4.56 88.13 19 6.08 Yes 6 1.35 Yes 0 0 No -30 0.6 No 52 70.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 154736717 + NR_024477 PAXIP1-AS2 1 16.29 1.65 56 7.89 85.05 42 6.07 Yes 29 1.15 Yes 0 0 No -30 0.68 Yes 40 62.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 154736721 + NR_024477 PAXIP1-AS2 1 1.24 0.11 8 1.26 0 46 6.32 Yes 33 1.14 Yes 0 0 No -34 0.66 No 36 61.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 75396718 + NM_016500 PBDC1 1 0.14 0.18 12 -1.1 69.25 27 5.66 Yes 14 0.73 No 0 0 No -26 0.72 Yes 44 71.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 75397523 + NM_016500 PBDC1 1 0.19 0.26 17 1.76 77.86 20 4.69 No 70 0.89 Yes 0 0 No -20 0.88 Yes 50 84.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 75397523 + NM_016500 PBDC1 1 2.15 3.1 66 1.76 77.86 20 4.69 No 70 0.89 Yes 0 0 No -20 0.88 Yes 50 84.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52586358 - NM_018313 PBRM1 1 1.07 0.67 32 1.5 79.38 24 4.48 No 7 0.8 Yes 0 0 No -23 0.96 Yes 47 89.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52592430 - NM_018313 PBRM1 1 23.94 17.92 72 5.61 79.29 23 4.35 No 2 0.56 No 22 0.46 Yes -22 0.74 Yes 48 40.84 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 52598207 - NM_018313 PBRM1 1 0.14 0.24 13 8.08 93.38 21 3.55 No 75 1.3 Yes 0 0 No -24 0.77 Yes 46 90.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52621527 - NM_018313 PBRM1 1 3609.77 116.75 72 2.85 76.44 48 7.22 Yes 29 1.51 Yes 27 0.51 Yes -47 0.77 Yes 23 91.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52623269 - NM_018313 PBRM1 1 7.96 10.51 72 2.18 71.95 43 5.98 Yes 50 1.19 Yes 23 0.46 Yes -26 0.64 No 28 63.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52633362 - NM_018313 PBRM1 1 0.09 0.1 7 6.96 71.7 37 6.1 Yes 24 0.9 Yes 0 0 No -26 0.78 Yes 44 83.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52633662 - NM_018313 PBRM1 1 0.09 0.11 7 7.28 85.02 35 8.22 Yes 22 1.14 Yes 0 0 No -34 0.91 Yes 36 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52636526 - NM_018313 PBRM1 1 0.07 0.1 7 2.27 73.6 26 4.99 No 52 -5.11 No 0 0 No -25 0.8 Yes 45 80.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52637744 - NM_018313 PBRM1 1 0.37 0.29 17 0.33 0 32 5.02 No 70 -6.21 No 0 0 No -31 0.72 Yes 39 63.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52651499 - NM_018313 PBRM1 1 0.19 0.25 16 5.33 80.89 29 5.75 Yes 76 1.49 Yes 0 0 No -28 0.44 No 50 47.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52654216 - NM_018313 PBRM1 1 0.1 0.13 7 8.18 78.23 30 4.58 No 0 1.38 Yes 0 0 No -24 0.49 No 41 57.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52658958 - NM_018313 PBRM1 1 1.41 1.76 55 8.33 93.2 100 9.46 Yes 10 1.19 Yes 29 0.79 Yes -27 0.66 No 41 62.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52660225 - NM_018313 PBRM1 1 0.26 0.31 18 5.74 88.11 18 5.55 No 5 0.58 No 0 0 No -26 0.59 No 44 61.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52665320 - NM_018313 PBRM1 1 0.12 0.14 10 8.79 87 25 4.54 No 39 1.42 Yes 0 0 No -31 0.47 No 45 40.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52681427 - NM_018313 PBRM1 1 0.27 0.4 20 5.68 69.49 115 11.23 Yes 75 -1.7 No 0 0 No -57 0.3 No 19 48.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52692359 - NM_018313 PBRM1 1 0.82 0.92 35 6.45 82.88 29 5.34 No 10 0.5 No 29 0.85 Yes -22 0.56 No 48 63.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 128511223 + NR_024123 PBX3 1 5.13 0.83 33 7.24 81.06 43 7 Yes NA NA NA 0 0 No -30 0.71 Yes 29 56.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 128532285 + NR_024123 PBX3 1 4.92 0.81 38 7.49 86 15 5.19 No 2 1.11 Yes 0 0 No -21 0.86 Yes 49 83.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128539007 + NR_024123 PBX3 1 1.04 0.15 10 8.31 86.16 23 7.35 Yes 10 1.32 Yes 0 0 No -22 0.92 Yes 48 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128540045 + NR_024123 PBX3 1 1.27 0.22 15 10.95 86.79 29 5.88 Yes 13 0.61 No 0 0 No -28 0.65 No 42 62.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 128540260 + NR_024123 PBX3 1 4.91 0.92 39 4.56 84.41 41 8.71 Yes 28 1.23 Yes 0 0 No -28 0.63 No 30 63.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 128547734 + NR_024123 PBX3 1 5.85 1.08 46 2.85 77.44 58 9.29 Yes 45 1.55 Yes 0 0 No -57 0.24 No 13 64.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 128552293 + NR_024123 PBX3 1 0.72 0.14 9 5.63 86.24 15 4.91 No 36 0.37 No 0 0 No -38 0.37 No 32 43.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 128559673 + NR_024123 PBX3 1 17.7 2.75 64 8.04 91 24 6.25 Yes 7 0.99 Yes 23 0.83 Yes -23 0.7 Yes 47 83.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 128563056 + NR_024123 PBX3 1 3.31 0.57 30 3.01 0 29 6.28 Yes 35 1.07 Yes 0 0 No -28 0.82 Yes 42 91.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 128572988 + NR_024123 PBX3 1 19.48 3.19 65 9.55 90.64 22 5.74 Yes 34 1.06 Yes 0 0 No -27 0.6 No 43 53.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 128581159 + NR_024123 PBX3 1 0.97 0.19 13 4.77 90.11 27 5.18 No 73 0.59 No 0 0 No -26 0.66 No 44 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 128613631 + NR_024123 PBX3 1 1.24 0.21 12 8.99 87 30 7.36 Yes 75 0.83 Yes 0 0 No -29 0.59 No 41 50.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 128677964 + NR_024123 PBX3 1 508.92 85.47 72 11.75 85.9 63 8.7 Yes 50 2.33 Yes 29 0.03 Yes -57 0.54 No 31 64.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 128711656 + NR_024123 PBX3 1 2.61 2.6 64 3.18 71.27 29 4.88 No 16 0.69 No 28 0.59 Yes -28 0.64 No 34 75.41 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 128724380 + NR_024123 PBX3 1 169.36 62.29 72 11.89 97.68 17 5.59 Yes 65 1.15 Yes 25 0.85 Yes -25 0.8 Yes 45 89.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154917612 - NM_001317735 PBXIP1 1 0.17 0.14 10 5.93 82.39 25 7.87 Yes 61 -1.2 No 21 0.9 Yes -24 0.96 Yes 46 96.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 154918153 - NM_001317735 PBXIP1 1 0.15 0.11 7 -4.4 0 44 8.13 Yes 69 1.82 Yes 0 0 No -43 0.71 Yes 27 58.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 154918215 - NM_001317735 PBXIP1 1 0.33 0.24 16 2.91 82.18 20 4.89 No 7 1.83 Yes 0 0 No -19 0.92 Yes 51 82.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154920041 - NM_001317735 PBXIP1 1 0.22 0.11 7 -2.69 72.43 22 4.65 No 56 -4.07 No 20 0.87 Yes -12 0.35 No 58 39.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 134241407 + NM_032151 PCBD2 1 0.75 0.15 7 8.52 84.41 22 6.2 Yes 9 1.5 Yes 0 0 No -21 0.55 No 41 70.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 134244519 + NM_032151 PCBD2 1 1.39 0.25 13 6.77 73.34 33 5.21 No 59 0.87 Yes 32 0.76 Yes -32 0.83 Yes 38 69.13 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 134246031 + NM_032151 PCBD2 1 0.73 0.11 8 0.37 0 12 4 No 67 -3.48 No 0 0 No -25 0.49 No 37 53.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 70273929 - NR_033872 PCBP1-AS1 1 40.82 3.4 64 8.41 88.54 42 7.07 Yes 67 1.14 Yes 37 0.21 Yes -37 0.74 Yes 33 82.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 70276090 - NR_033872 PCBP1-AS1 1 10.98 0.85 34 -4.34 62.32 17 4.09 No 51 0.6 No 21 0.82 Yes -21 0.68 Yes 61 17.4 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 70277385 - NR_033872 PCBP1-AS1 1 26.92 2.22 61 2.46 84.12 23 4.9 No 0 1.44 Yes 22 0.96 Yes -22 0.81 Yes 11 73.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 70277401 - NR_033872 PCBP1-AS1 1 10.85 0.82 31 4.01 79.39 69 8.37 Yes 67 -2.09 No 22 0.96 Yes -43 0.89 Yes 27 87.68 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53848084 + NM_005016 PCBP2 1 0.03 0.33 18 9.29 81.53 18 5.74 Yes 60 0.71 No 0 0 No -28 0.75 Yes 42 80.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53848169 + NM_005016 PCBP2 1 0.02 0.28 17 7.84 87.89 12 5.48 No -1 0.22 No 0 0 No -29 0.79 Yes 41 75.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 53848510 + NM_005016 PCBP2 1 0.05 0.54 30 -11.57 0 48 7.22 Yes 35 1.89 Yes 24 0.86 Yes -25 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 53848533 + NM_005016 PCBP2 1 2.23 25.39 72 5.07 72.36 27 4.67 No 58 1.87 Yes 27 0.8 Yes -31 0.76 Yes 39 87.99 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53849134 + NM_005016 PCBP2 1 0.01 0.17 11 -4.13 0 27 5.29 No 14 1.97 Yes 0 0 No -26 0.86 Yes 44 94.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53849245 + NM_005016 PCBP2 1 0.09 1.43 51 -13.3 0 17 4.68 No 11 1.33 Yes 0 0 No -23 0.97 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 53849248 + NM_005016 PCBP2 1 0.01 0.11 7 -1.91 0 20 4.88 No 14 1.31 Yes 0 0 No -26 0.96 Yes 44 93.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53849667 + NM_005016 PCBP2 1 0 0.1 7 -8.95 0 29 6.44 Yes 16 0.99 Yes 0 0 No -28 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 53849670 + NM_005016 PCBP2 1 0.04 0.85 37 -11.08 76.96 32 6.62 Yes 19 0.98 Yes 26 0.69 Yes -31 0.79 Yes 39 72.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53852134 + NM_005016 PCBP2 1 0.04 1.07 44 7.69 84.13 15 4.82 No 2 1.04 Yes 0 0 No -26 0.67 Yes 44 59.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 53856276 + NM_005016 PCBP2 1 0.01 0.13 8 8.3 82.26 39 4.71 No 0 2.16 Yes 0 0 No -38 0.79 Yes 32 87.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53853583 + NM_005016 PCBP2 1 0.24 4.4 68 10.53 90.83 45 7.84 Yes 3 1.59 Yes 25 0.95 Yes -25 0.7 Yes 45 55.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 53853951 + NM_005016 PCBP2 1 0.02 0.33 22 4.19 0 33 6.78 Yes 20 1.1 Yes 0 0 No -32 0.68 Yes 38 77.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53854114 + NM_005016 PCBP2 1 0.09 1.68 57 8.93 84.33 26 7.55 Yes 76 1.57 Yes 25 0.94 Yes -25 0.94 Yes 45 95.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53854800 + NM_005016 PCBP2 1 0.05 0.96 44 -14.85 68.98 29 7.41 Yes 16 0.86 Yes 0 0 No -28 0.84 Yes 42 87.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53854805 + NM_005016 PCBP2 1 0.03 0.5 30 -7.38 0 17 4 No 21 0.83 Yes 0 0 No -33 0.77 Yes 37 86.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53855677 + NM_005016 PCBP2 1 0.01 0.21 14 8.04 86.87 21 7.21 Yes 60 1.77 Yes 0 0 No -20 0.86 Yes 50 90.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53856276 + NM_005016 PCBP2 1 88.43 1229.68 72 8.3 82.26 39 4.71 No 0 2.16 Yes 0 0 No -38 0.79 Yes 32 87.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53862563 + NM_005016 PCBP2 1 2.15 34.32 72 9.97 92.78 32 7.74 Yes 19 0.85 Yes 28 0.68 Yes -31 0.82 Yes 39 63.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 53862563 + NM_005016 PCBP2 1 22.63 359.63 72 9.97 92.78 32 7.74 Yes 19 0.85 Yes 28 0.68 Yes -31 0.82 Yes 39 63.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 53862726 + NM_005016 PCBP2 1 0.01 0.13 7 10.06 91.97 44 6.5 Yes 31 0.45 No 0 0 No -29 0.64 No 41 88.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 53865081 + NM_005016 PCBP2 1 0.05 1.24 47 10.09 89.4 32 6.16 Yes 31 0.54 No 0 0 No -29 0.56 No 41 49.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 53868652 + NM_005016 PCBP2 1 0.74 13.43 72 11.04 86.63 66 6.59 Yes 53 1.12 Yes 36 0.27 Yes -36 0.48 No 34 83.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 53868657 + NM_005016 PCBP2 1 0.02 0.26 14 3.86 0 71 6.77 Yes 58 1.1 Yes 0 0 No -41 0.48 No 29 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 51992169 - NM_033008 PCBP4 1 11.28 1.5 51 9.42 87.19 41 5.86 Yes 28 1.01 Yes 34 0.15 Yes -34 0.62 No 30 61.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 51992949 - NM_033008 PCBP4 1 2.81 0.46 21 2.87 73.08 25 6 Yes 34 0.98 Yes 0 0 No -57 0.62 No 46 49.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 51994654 - NM_033008 PCBP4 1 2.96 0.57 32 -3.21 0 21 7.07 Yes 8 1.29 Yes 0 0 No -30 0.74 Yes 50 67.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 100769722 + NM_001127692 PCCA 1 3.59 0.92 37 -3.27 53.71 92 10.44 Yes -4 -1.05 No 0 0 No -50 0.68 Yes 20 85.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 100769728 + NM_001127692 PCCA 1 0.8 0.22 13 -3.14 0 15 3.86 No 2 -1.42 No 0 0 No -56 0.62 No 14 82.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 100773010 + NM_001127692 PCCA 1 1.24 0.35 16 11.4 96.43 31 4.32 No 34 0.42 No 0 0 No -34 0.73 Yes 36 66.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 100796984 + NM_001127692 PCCA 1 1.01 0.21 11 7.53 81.66 35 4.96 No 11 0.15 No 0 0 No -23 0.92 Yes 47 94.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 100806747 + NM_001127692 PCCA 1 1.98 0.54 23 9.71 87.69 27 5.04 No 8 0.94 Yes 26 0.73 Yes -26 0.66 No 44 76.81 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr13 100812926 + NM_001127692 PCCA 1 1.21 0.35 22 10.65 97.44 39 6.13 Yes 35 1.35 Yes 32 0.39 Yes -32 0.53 No 38 57.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 100850541 + NM_001127692 PCCA 1 0.75 0.25 15 4.06 79.96 30 5.56 Yes 42 1.82 Yes 0 0 No -25 0.65 No 45 79.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 100866700 + NM_001127692 PCCA 1 0.97 0.26 14 11.87 87.82 45 7 Yes 53 -1.03 No 0 0 No -44 0.76 Yes 26 80.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 100868399 + NM_001127692 PCCA 1 0.86 0.26 17 2.02 72.03 102 10.8 Yes 3 -1.87 No 0 0 No -48 0.41 No 56 19.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 100875349 + NM_001127692 PCCA 1 0.47 0.14 9 6.49 85.24 43 7.91 Yes 1 0.57 No 0 0 No -24 0.5 No 37 46.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 100888734 + NM_001127692 PCCA 1 3.48 0.86 40 10.44 85.05 42 8.13 Yes 29 1.21 Yes 0 0 No -41 0.79 Yes 29 83.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 100889671 + NM_001127692 PCCA 1 0.51 0.13 8 11.35 95.2 31 7.41 Yes 18 1.85 Yes 0 0 No -30 0.56 No 40 61.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 100910492 + NM_001127692 PCCA 1 0.64 0.18 12 3.89 73.26 32 5.78 Yes 54 0.5 No 0 0 No -32 0.75 Yes 38 71.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 100958004 + NM_001127692 PCCA 1 12.97 2.92 66 6.03 84.02 13 5.3 No 0 0.92 Yes 27 0.36 Yes -27 0.32 No 45 37.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 100985826 + NM_001127692 PCCA 1 0.8 0.21 14 8.88 80.93 20 4.03 No 46 0.46 No 0 0 No -29 0.84 Yes 41 86.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 101039022 + NM_001127692 PCCA 1 1.46 0.28 17 8.63 79.25 39 6.4 Yes 62 -3.51 No 0 0 No -32 0.58 No 38 37.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 101179550 + NM_001127692 PCCA 1 0.61 0.13 8 9.57 88.81 26 6 Yes 13 1.8 Yes 25 0.74 Yes -25 0.73 Yes 45 83.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 135971144 + NM_000532 PCCB 1 0.08 0.13 7 2.23 84.79 15 4.41 No 2 0.8 Yes 25 0.9 Yes -25 0.59 No 45 67.78 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 135971530 + NM_000532 PCCB 1 0.12 0.17 9 7.2 87 28 6.24 Yes 15 1.4 Yes 0 0 No -27 0.89 Yes 43 92.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 135978017 + NM_000532 PCCB 1 0.41 0.75 40 5.56 84.29 34 5.94 Yes 21 1.77 Yes 33 0.77 Yes -33 0.78 Yes 37 78.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 135979104 + NM_000532 PCCB 1 0.1 0.21 12 10.72 93.53 24 5.92 Yes 11 1.8 Yes 23 0.94 Yes -23 0.88 Yes 47 93.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 136021132 + NM_000532 PCCB 1 0.12 0.21 11 4.63 78.5 15 5.18 No 2 1.32 Yes 0 0 No -27 0.53 No 43 53.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 136045167 + NM_000532 PCCB 1 1.18 2.22 65 8.17 76.7 31 5.68 Yes 18 0.58 No 30 0.81 Yes -26 0.72 Yes 44 68.24 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 136046002 + NM_000532 PCCB 1 0.08 0.14 7 -2.48 0 15 3.87 No 12 1.59 Yes 0 0 No -25 0.5 No 45 53.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 2816757 - NM_022760 PCED1A 1 2.54 1.24 42 5.8 93.23 22 5.29 No 45 1.4 Yes 21 0.4 Yes -25 0.58 No 52 35.2 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 2816812 - NM_022760 PCED1A 1 0.2 0.11 7 6.22 77.41 50 6.78 Yes NA NA NA 0 0 No -27 0.7 Yes 43 76.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2819004 - NM_022760 PCED1A 1 0.59 0.29 18 4.11 78.25 37 6 Yes 24 0.49 No 0 0 No -27 0.59 No 43 54.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 2819567 - NM_022760 PCED1A 1 0.86 0.17 10 -4.74 0 18 4.24 No 15 1.5 Yes 0 0 No -17 0.75 Yes 43 54.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 2819576 - NM_022760 PCED1A 1 31.43 4.71 69 -5.43 72.25 19 8.47 Yes 6 1.52 Yes 19 0.37 Yes -22 0.75 Yes 52 78.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 2819639 - NM_022760 PCED1A 1 3.44 0.47 23 -3.34 0 12 4.24 No 62 -4.54 No 0 0 No -17 0.43 No 46 43.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 2819657 - NM_022760 PCED1A 1 3.49 0.56 29 -5.14 56.07 21 4.56 No 44 -3.41 No 0 0 No -20 0.43 No 56 25.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 2819684 - NM_022760 PCED1A 1 3.7 0.6 30 -1.3 61.42 21 5.2 No 59 -2.84 No 0 0 No -23 0.25 No 50 28.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 2819913 - NM_022760 PCED1A 1 1.45 0.57 28 4.42 0 33 6.24 Yes 20 0.66 No 0 0 No -32 0.89 Yes 38 91.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2819943 - NM_022760 PCED1A 1 0.59 0.26 16 -3.11 0 14 4.47 No 50 -3.44 No 27 0.93 Yes -19 0.22 No 51 42.81 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 2820493 - NM_022760 PCED1A 1 1.44 0.22 12 5.75 88.13 18 5.27 No NA NA NA 0 0 No -22 0.39 No 48 34.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 47603242 - NR_026544 PCED1B-AS1 1 6.54 2.46 54 4.45 84.95 27 5.73 Yes 44 0.95 Yes 26 0.81 Yes -26 0.57 No 22 81.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 47603242 - NR_026544 PCED1B-AS1 1 1.12 0.4 24 4.45 84.95 27 5.73 Yes 44 0.95 Yes 26 0.81 Yes -26 0.57 No 22 81.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 47603266 - NR_026544 PCED1B-AS1 1 1.04 0.33 21 1.94 83.24 25 4.99 No 20 0.96 Yes 24 0.86 Yes -24 0.91 Yes 46 69.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 47604541 - NR_026544 PCED1B-AS1 1 3.77 1.43 43 2.28 0 63 7.17 Yes 26 1.04 Yes 24 0.63 Yes -24 0.61 No 42 74.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 47609997 - NR_026544 PCED1B-AS1 1 1.55 0.82 35 -0.58 58.34 54 5.78 Yes 65 1.27 Yes 18 0.87 Yes -38 0.6 No 32 82.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 47610083 - NR_026544 PCED1B-AS1 1 0.78 0.42 20 1.88 66.45 13 4.77 No 29 0.66 No 32 0.87 Yes -41 0.93 Yes 29 81.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 82872353 + NM_001346413 PCF11 1 0.43 0.25 13 3.4 73.17 56 6.03 Yes -2 1.27 Yes 25 0.64 Yes -23 0.66 Yes 47 71.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 82877919 + NM_001346413 PCF11 1 0.14 0.18 9 10.9 93.61 28 7.85 Yes 37 1.25 Yes 0 0 No -27 0.49 No 49 52.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 82888689 + NM_001346413 PCF11 1 0.44 0.31 17 4.25 71.6 35 6.07 Yes 30 0.53 No 0 0 No -37 0.49 No 42 61.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 82888702 + NM_001346413 PCF11 1 0.34 0.19 11 5.7 82.32 23 4.69 No 43 0.53 No 0 0 No -25 0.63 No 45 75.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 82888758 + NM_001346413 PCF11 1 9.39 5.63 72 -3.88 60.17 34 6.3 Yes 66 0.07 No 0 0 No -33 0.86 Yes 37 79.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 82895813 + NM_001346413 PCF11 1 0.34 0.44 28 2.98 67.83 48 6.71 Yes 35 -3.27 No 0 0 No -24 0.53 No 40 43.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 74732740 - NM_032673 PCGF1 1 0.4 0.22 12 6.41 71.58 13 5.1 No 52 1.94 Yes 26 0.45 Yes -19 0.34 No 51 44.52 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 36894705 - NM_007144 PCGF2 1 0.77 0.43 22 3.69 77.34 23 6.91 Yes 74 -3.32 No 25 0.69 Yes -19 0.55 No 51 61.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 724665 + NM_006315 PCGF3 1 0.43 0.14 9 8.53 83.75 27 5.83 Yes 14 1.83 Yes 0 0 No -26 0.89 Yes 44 68.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 724740 + NM_006315 PCGF3 1 0.96 0.29 18 -0.94 0 20 4.47 No 18 -1.42 No 19 0.77 Yes -19 0.88 Yes 51 45.09 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 726188 + NM_006315 PCGF3 1 37.36 11.56 72 10.26 87.22 102 11.53 Yes NA NA NA 25 0.32 Yes -51 0.29 No 42 19.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 726204 + NM_006315 PCGF3 1 0.55 0.17 12 4.2 79.45 13 3.58 No NA NA NA 23 0.86 Yes -57 0.25 No 50 17.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 726232 + NM_006315 PCGF3 1 4.13 1.33 48 4.63 73.68 21 5.2 No 8 -2.02 No 23 0.86 Yes -23 0.91 Yes 47 83.36 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 727672 + NM_006315 PCGF3 1 17.42 6.17 72 5.52 68.43 36 6.48 Yes 3 0.07 No 35 0.27 Yes -35 0.35 No 35 72.49 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 728578 + NM_006315 PCGF3 1 1.72 0.6 31 4.28 92.15 17 4.8 No 50 0.81 Yes 30 0.56 Yes -17 0.38 No 53 69.12 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 733301 + NM_006315 PCGF3 1 0.37 0.18 9 8.42 89.47 33 5.65 Yes 76 0.57 No 0 0 No -26 0.82 Yes 44 87.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 734563 + NM_006315 PCGF3 1 0.39 0.24 16 3.08 68.6 31 5.56 Yes 29 -3.76 No 0 0 No -26 0.43 No 44 60.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 737204 + NM_006315 PCGF3 1 0.2 0.13 8 5.19 76.99 42 7.35 Yes 16 1.34 Yes 0 0 No -28 0.83 Yes 42 89.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 741689 + NM_006315 PCGF3 1 0.38 0.25 13 7.7 88.68 36 8.12 Yes 61 1.08 Yes 0 0 No -31 0.66 No 35 72.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 748763 + NM_006315 PCGF3 1 0.99 0.69 32 11.19 98.67 9 5.83 Yes 64 -4.52 No 0 0 No -27 0.69 Yes 45 63.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 755517 + NM_006315 PCGF3 1 1.66 1.17 43 4.7 79.22 34 5.83 Yes 57 0.03 No 0 0 No -33 0.59 No 37 58.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 755772 + NM_006315 PCGF3 1 0.4 0.28 9 2.55 70.49 13 6.56 Yes 0 -1.06 No 0 0 No -33 0.58 No 37 43.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 757260 + NM_006315 PCGF3 1 0.2 0.15 10 7.79 87.24 14 6.16 Yes 45 1.18 Yes 0 0 No -37 0.85 Yes 52 70.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 759822 + NM_006315 PCGF3 1 1.54 1.14 46 2.92 77.35 35 6.16 Yes 69 0.79 Yes 31 0.84 Yes -34 0.85 Yes 36 89.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 92981274 + NM_032373 PCGF5 1 0.39 0.31 18 -1.46 70.31 60 8.16 Yes 47 1.64 Yes 0 0 No -44 0.51 No 26 60.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 92987093 + NM_032373 PCGF5 1 63.86 119.76 72 6.97 81.54 17 6.63 Yes 4 1.32 Yes 27 0.64 Yes -35 0.51 No 43 64.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 92987099 + NM_032373 PCGF5 1 0.31 0.6 32 3.02 0 9 3.87 No 10 1.28 Yes 0 0 No -22 0.73 Yes 48 75.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 92995654 + NM_032373 PCGF5 1 0.13 0.24 16 4.86 71.51 28 6.4 Yes 15 0.97 Yes 0 0 No -31 0.61 No 40 64.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93008424 + NM_032373 PCGF5 1 3.16 6.51 72 1.14 71.9 37 7.12 Yes 24 1.22 Yes 0 0 No -39 0.51 No 31 49.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93019215 + NM_032373 PCGF5 1 0.28 0.25 14 6.44 83.77 21 5.2 No 67 0.74 No 0 0 No -27 0.8 Yes 43 73.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 93024712 + NM_032373 PCGF5 1 0.29 0.35 15 8.84 94.9 17 4.56 No 0 0.77 No 0 0 No -22 0.47 No 48 59.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 93031353 + NM_032373 PCGF5 1 0.13 0.15 10 3.75 69.15 66 6.63 Yes 44 1.55 Yes 21 0.89 Yes -23 0.53 No 37 43.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 105074026 - NM_001011663 PCGF6 1 0.55 0.26 13 0.72 0 26 6.67 Yes 13 1.38 Yes 0 0 No -25 0.77 Yes 45 61.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 105086412 - NM_001011663 PCGF6 1 1.47 0.29 16 2.19 55.36 13 5.47 No 0 0.12 No 29 0.72 Yes -12 0.42 No 58 58.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 105099379 - NM_001011663 PCGF6 1 0.81 0.13 9 4.23 80.64 21 5.66 Yes 8 1.06 Yes 0 0 No -20 0.7 Yes 50 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105107077 - NM_001011663 PCGF6 1 2.76 0.75 29 -0.06 0 13 4.19 No 60 0.26 No 18 0.54 Yes -20 0.65 No 50 58.79 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 113832323 - NM_018386 PCID2 1 67.43 12.1 72 5.03 73.33 28 6.17 Yes 15 0.79 Yes 27 0.82 Yes -27 0.85 Yes 43 90.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr13 113838343 - NM_018386 PCID2 1 0.77 1.1 41 4.46 66.98 37 5.7 Yes 28 0.82 Yes 0 0 No -36 0.54 No 34 59.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 113838767 - NM_018386 PCID2 1 1.44 2.21 67 2.6 59.27 43 6.17 Yes 45 0 No 0 0 No -32 0.3 No 48 39.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 113848237 - NM_018386 PCID2 1 0.12 0.14 8 4.16 83.2 27 5.19 No 14 0.33 No 0 0 No -26 0.69 Yes 47 60.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 113848641 - NM_018386 PCID2 1 0.16 0.17 10 4.26 89.95 18 4.8 No 5 0.69 No 0 0 No -23 0.39 No 53 32.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 113848665 - NM_018386 PCID2 1 0.11 0.14 10 -1.18 59.06 46 7.21 Yes 56 -0.68 No 0 0 No -45 0.73 Yes 25 81.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113862521 - NM_018386 PCID2 1 0.26 0.22 12 7.04 92.28 51 7.5 Yes NA NA NA 0 0 No -21 0.59 No 49 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 44571708 + NM_022104 PCIF1 1 0.24 0.13 7 3.95 81.64 12 5.07 No 45 0.88 Yes 21 0.93 Yes -26 0.65 No 63 23.72 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 44572883 + NM_022104 PCIF1 1 4.71 2.68 65 9.02 94.74 18 5.29 No 27 0.47 No 0 0 No -21 0.47 No 49 63.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 44574351 + NM_022104 PCIF1 1 0.54 0.26 14 -4.31 72.96 23 6.37 Yes 10 1.73 Yes 0 0 No -22 0.95 Yes 48 92.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44574687 + NM_022104 PCIF1 1 0.94 0.5 27 6.88 86.35 25 5.38 No 38 1.14 Yes 0 0 No -24 0.56 No 48 60.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 44575722 + NM_022104 PCIF1 1 0.21 0.13 9 0.51 0 14 4.47 No 13 1.71 Yes 0 0 No -34 0.85 Yes 45 64.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 44576214 + NM_022104 PCIF1 1 1.63 0.85 36 10.28 89.4 24 6.05 Yes 61 1.39 Yes 0 0 No -24 0.64 No 49 63.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24564722 + NM_001308054 PCK2 1 2.13 0.19 13 9.07 92.55 20 5.1 No 7 1.45 Yes 0 0 No -19 0.72 Yes 51 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24564986 + NM_001308054 PCK2 1 1.92 0.21 13 9.51 92 30 5.57 Yes 76 1.23 Yes 0 0 No -29 0.45 No 46 51.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24567664 + NM_001308054 PCK2 1 0.62 0.6 32 4.74 83.31 26 5.39 No 53 -1.85 No 25 0.91 Yes -25 0.78 Yes 45 60.3 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 24568266 + NM_001308054 PCK2 1 0.28 0.42 26 -11.67 0 12 4.24 No 66 1.67 Yes 0 0 No -25 0.55 No 36 42.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24573050 + NM_001308054 PCK2 1 0.33 0.47 26 7.38 78.11 21 5.19 No 8 1.26 Yes 20 0.85 Yes -20 0.91 Yes 50 91.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24573050 + NM_001308054 PCK2 1 1.57 2.38 64 7.38 78.11 21 5.19 No 8 1.26 Yes 20 0.85 Yes -20 0.91 Yes 50 91.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 64658394 - NR_109934 PCLAF 1 0.06 0.19 13 8.35 83.14 29 5.38 No 16 0.62 No 0 0 No -28 0.8 Yes 42 86.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64658394 - NR_109934 PCLAF 1 0.05 0.14 8 8.35 83.14 29 5.38 No 16 0.62 No 0 0 No -28 0.8 Yes 42 86.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64662967 - NR_109934 PCLAF 1 0.04 0.11 7 2.71 72.7 19 4.68 No 76 -4.06 No 0 0 No -19 0.87 Yes 51 76.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64665832 - NR_109934 PCLAF 1 0.31 0.75 35 8.94 89.13 43 7.67 Yes 30 0.71 No 0 0 No -42 0.7 Yes 28 61.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 64665960 - NR_109934 PCLAF 1 0.19 0.49 25 -0.81 0 41 5.47 No 55 0.86 Yes 0 0 No -35 0.53 No 35 64.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 64665964 - NR_109934 PCLAF 1 1.57 4.39 71 3.64 77.86 37 5.2 No 51 0.88 Yes 19 0.45 Yes -31 0.58 No 39 63.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 64665964 - NR_109934 PCLAF 1 0.13 0.36 23 3.64 77.86 37 5.2 No 51 0.88 Yes 19 0.45 Yes -31 0.58 No 39 63.63 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 64666058 - NR_109934 PCLAF 1 0.05 0.13 7 -1.2 61.27 32 3.87 No 19 0.41 No 0 0 No -31 0.72 Yes 39 78.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64669128 - NR_109934 PCLAF 1 0.14 0.83 37 -0.69 0 17 4.42 No 31 0.04 No 29 0.85 Yes -19 0.48 No 51 66.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 64671509 - NR_109934 PCLAF 1 1.09 6.1 71 8.08 86.16 20 7.28 Yes 7 1.26 Yes 0 0 No -19 0.74 Yes 51 84.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64672900 - NR_109934 PCLAF 1 0.03 0.17 11 11.22 87.44 39 5.77 Yes 20 0.5 No 0 0 No -32 0.82 Yes 38 73.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 17792214 + NM_001315508 PCM1 1 0.2 0.39 20 9.92 86.8 28 5.36 No 43 1.23 Yes 22 0.32 Yes -22 0.27 No 48 45.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 17786611 + NM_001315508 PCM1 1 0.48 1.01 40 3.87 72.89 48 6.62 Yes 32 1.62 Yes 0 0 No -47 0.86 Yes 23 93.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 17792214 + NM_001315508 PCM1 1 6.86 14.01 72 9.92 86.8 28 5.36 No 43 1.23 Yes 22 0.32 Yes -22 0.27 No 48 45.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 17792218 + NM_001315508 PCM1 1 0.18 0.35 19 2.05 0 32 5.63 Yes 47 1.22 Yes 0 0 No -21 0.43 No 44 44.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 17792642 + NM_001315508 PCM1 1 0.09 0.18 11 11.94 92.93 31 9.59 Yes 18 0.42 No 0 0 No -30 0.65 No 40 52.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17796250 + NM_001315508 PCM1 1 0.08 0.25 14 -5.72 74.35 38 6.42 Yes 25 0.94 Yes 0 0 No -26 0.55 No 33 84.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 17796347 + NM_001315508 PCM1 1 1.64 4.44 69 8.82 91.1 19 4.81 No 6 0.47 No 28 0.31 Yes -18 0.3 No 52 28.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 17797550 + NM_001315508 PCM1 1 57.11 77.29 72 4.33 77.84 36 4.38 No 76 0.73 No 27 0.67 Yes -35 0.72 Yes 50 49.87 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 17799155 + NM_001315508 PCM1 1 0.72 0.96 43 0.35 74.15 24 5.49 No 36 0.14 No 0 0 No -23 0.56 No 47 46.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17808105 + NM_001315508 PCM1 1 0.06 0.11 7 0.9 63.17 35 5.8 Yes 71 0.35 No 26 0.8 Yes -34 0.77 Yes 36 59.48 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 17808132 + NM_001315508 PCM1 1 0.35 0.89 39 3.35 0 12 4.24 No 9 1.23 Yes 0 0 No -35 0.66 Yes 49 36.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 17813035 + NM_001315508 PCM1 1 0.21 0.83 30 7.78 85.1 21 5.2 No 47 0.25 No 0 0 No -20 0.85 Yes 50 85.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 17814397 + NM_001315508 PCM1 1 0.05 0.11 7 7.31 77.14 22 5.92 Yes 62 0.48 No 0 0 No -21 0.88 Yes 49 82.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 17814904 + NM_001315508 PCM1 1 0.05 0.13 7 0.09 63.25 26 5.19 No 73 0.78 Yes 0 0 No -25 0.85 Yes 45 30.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 17815048 + NM_001315508 PCM1 1 2537.71 185.81 72 4.74 83.91 31 4.57 No 43 1.21 Yes 27 0.87 Yes -20 0.55 No 40 66.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 17818550 + NM_001315508 PCM1 1 0.06 0.18 10 7.33 88.83 42 6.44 Yes 3 1.11 Yes 0 0 No -31 0.4 No 39 49.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 17820128 + NM_001315508 PCM1 1 0.08 0.18 10 8.58 83.71 25 5.57 Yes 23 0.34 No 0 0 No -24 0.6 No 41 66.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17823880 + NM_001315508 PCM1 1 0.13 0.42 19 5.56 75.1 50 6.89 Yes 53 0.76 No 0 0 No -25 0.87 Yes 45 63.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 17824465 + NM_001315508 PCM1 1 0.05 0.11 7 3.27 69.69 68 7.67 Yes 27 0.86 Yes 25 0.84 Yes -29 0.48 No 47 52.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 17824611 + NM_001315508 PCM1 1 0.04 0.1 7 8.92 92.2 16 5.19 No 70 -2.68 No 0 0 No -22 0.45 No 50 43.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17824837 + NM_001315508 PCM1 1 0.23 0.64 34 6.77 88.21 32 6.48 Yes 64 0.93 Yes 0 0 No -29 0.54 No 39 75.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 17827124 + NM_001315508 PCM1 1 0.45 1.22 49 1.18 79.91 35 5.81 Yes 49 1.35 Yes 0 0 No -28 0.92 Yes 42 83.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 17838078 + NM_001315508 PCM1 1 2.08 1.29 48 0.41 63.89 23 4.71 No 16 -2.98 No 28 0.85 Yes -22 0.63 No 52 51.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 17838099 + NM_001315508 PCM1 1 298.67 191.74 72 6.28 88.83 29 4.85 No 13 0.95 Yes 28 0.85 Yes -25 0.39 No 45 59.78 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 17840741 + NM_001315508 PCM1 1 20.56 13.47 72 11.08 84.41 44 6.74 Yes 31 1.22 Yes 26 0.92 Yes -26 0.82 Yes 44 62.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 17846460 + NM_001315508 PCM1 1 4.01 10.67 72 9.29 88.59 22 4.9 No 9 0.99 Yes 0 0 No -21 0.88 Yes 49 92.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 17851061 + NM_001315508 PCM1 1 0.2 0.43 26 5.29 70.25 26 5.4 No 17 0.44 No 0 0 No -29 0.47 No 45 66.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17863734 + NM_001315508 PCM1 1 0.5 0.99 40 7.64 79.34 23 8.13 Yes 32 0.91 Yes 21 0.91 Yes -30 0.61 No 40 64.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 17863759 + NM_001315508 PCM1 1 7.72 15.49 72 6.8 73.74 23 5.31 No -3 1.14 Yes 21 0.91 Yes -22 0.54 No 48 47.35 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 17863774 + NM_001315508 PCM1 1 0.44 0.9 39 -13 78.56 25 4.89 No 12 1.37 Yes 0 0 No -24 0.88 Yes 46 87.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 17867199 + NM_001315508 PCM1 1 0.15 0.22 14 1.67 72.46 21 3.92 No 47 0.4 No 0 0 No -21 0.58 No 50 66.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17869187 + NM_001315508 PCM1 1 0.28 0.6 34 0.31 0 20 3.25 No 64 0.25 No 0 0 No -22 0.8 Yes 48 47.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 17883056 + NM_001315508 PCM1 1 0.22 0.51 29 0.92 0 33 8.48 Yes 20 0.51 No 0 0 No -32 0.56 No 38 54.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 150080463 + NM_001252053 PCMT1 1 0.07 0.22 16 8.65 94.1 21 5.76 Yes 75 0.96 Yes 0 0 No -20 0.68 Yes 38 48.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 150086826 + NM_001252053 PCMT1 1 0.04 0.14 8 7.26 90.64 48 7.52 Yes 35 2.26 Yes 27 0.62 Yes -47 0.32 No 23 43.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 150088425 + NM_001252053 PCMT1 1 0.08 0.22 15 6.73 84.44 40 6.44 Yes 27 1.6 Yes 0 0 No -35 0.74 Yes 35 94.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 150091412 + NM_001252053 PCMT1 1 0.1 0.26 17 8.69 92.45 34 6.74 Yes 21 2.24 Yes 0 0 No -33 0.65 No 37 83.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 150093149 + NM_001252053 PCMT1 1 0.17 0.49 30 9.15 81.99 50 6.76 Yes 37 1.74 Yes 36 0.7 Yes -36 0.51 No 18 56.9 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 150093180 + NM_001252053 PCMT1 1 0.29 0.83 40 4.97 77.37 17 5.99 Yes 68 1.73 Yes 19 0.49 Yes -21 0.66 No 49 56.95 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 150093183 + NM_001252053 PCMT1 1 0.3 0.89 44 4.04 85.31 20 6.23 Yes 71 1.73 Yes 19 0.49 Yes -24 0.56 No 46 55.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 150093690 + NM_001252053 PCMT1 1 0.11 0.33 14 7.31 80.14 19 5.65 Yes 6 1.03 Yes 22 0.94 Yes -22 0.9 Yes 48 94.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 150106328 + NM_001252053 PCMT1 1 0.07 0.14 7 9.02 98.83 28 6.35 Yes 15 1.15 Yes 0 0 No -23 0.86 Yes 47 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 150123342 + NM_001252053 PCMT1 1 0.07 0.19 10 1.3 0 10 4 No 24 1.21 Yes 0 0 No -32 0.72 Yes 38 71.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 150123390 + NM_001252053 PCMT1 1 0.04 0.11 8 9.55 91.21 23 5.92 Yes 72 1.16 Yes 0 0 No -22 0.78 Yes 48 76.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 52739922 - NM_052937 PCMTD1 1 11.4 5.61 71 8.11 88.27 32 6.33 Yes 12 0.66 No 31 0.8 Yes -31 0.78 Yes 39 84.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 52752199 - NM_052937 PCMTD1 1 10.07 4.53 71 6.28 88.94 30 5.92 Yes 40 0.15 No 29 0.68 Yes -29 0.91 Yes 41 86.78 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 52756458 - NM_052937 PCMTD1 1 0.94 0.47 25 2.9 70.37 19 4.64 No 54 -3.16 No 0 0 No -18 0.49 No 46 59.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 52760977 - NM_052937 PCMTD1 1 0.22 0.1 7 10.57 87.16 39 6.92 Yes 26 1.15 Yes 0 0 No -38 0.38 No 43 46.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 52762775 - NM_052937 PCMTD1 1 0.73 0.31 18 6.79 92.07 20 4.64 No 2 0.86 Yes 0 0 No -22 0.72 Yes 48 68.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 52770152 - NM_052937 PCMTD1 1 1.59 0.76 30 8.81 92.35 23 5.39 No 57 0.92 Yes 0 0 No -22 0.88 Yes 48 89.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 52771942 - NM_052937 PCMTD1 1 0.29 0.17 10 2.98 0 38 6.59 Yes 57 0.53 No 0 0 No -37 0.69 Yes 33 95.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 52810766 - NM_052937 PCMTD1 1 0.54 0.1 7 10.56 82.61 29 7.48 Yes 16 0.67 No 0 0 No -29 0.76 Yes 41 76.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62887902 + NM_001104925 PCMTD2 1 1.03 0.11 7 9.24 88.28 16 5.39 No 60 0.85 Yes 26 0.94 Yes -25 0.7 Yes 45 55 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 62890119 + NM_001104925 PCMTD2 1 2.22 0.22 14 6.28 87.7 22 4.99 No 75 -5.43 No 22 0.81 Yes -21 0.81 Yes 49 69.23 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 5096003 - NM_002592 PCNA 1 0.24 8.19 72 4.44 0 9 3.87 No 14 1.46 Yes 0 0 No -26 0.65 No 44 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 5096217 - NM_002592 PCNA 1 0.01 0.19 11 -24.88 0 23 6.06 Yes 23 0.88 Yes 0 0 No -26 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 5096968 - NM_002592 PCNA 1 0.01 0.19 12 3.32 0 45 7.18 Yes 73 1.36 Yes 0 0 No -45 0.67 Yes 26 88.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 5098305 - NM_002592 PCNA 1 0.04 1.19 46 -2.95 0 11 3.83 No 29 0.38 No 0 0 No -34 0.55 No 29 72.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 5099319 - NM_002592 PCNA 1 0.05 0.86 33 -0.8 0 31 5.83 Yes 18 0.27 No 0 0 No -30 0.94 Yes 40 94.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5099323 - NM_002592 PCNA 1 0.01 0.21 11 -15.7 0 27 5.47 No 14 0.29 No 0 0 No -26 0.94 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 5099327 - NM_002592 PCNA 1 0.01 0.11 7 -3.26 0 23 5.09 No 10 0.29 No 25 0.94 Yes -22 0.93 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 5099344 - NM_002592 PCNA 1 0.01 0.21 11 2.5 73.37 16 4.69 No 56 0.23 No 25 0.94 Yes -36 0.46 No 34 64.45 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 5099357 - NM_002592 PCNA 1 0.01 0.11 8 0.62 68.4 16 5.44 No 43 0.23 No 25 0.94 Yes -23 0.79 Yes 47 83.71 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 5099534 - NM_002592 PCNA 1 0.01 0.15 9 3.48 74.09 24 5.2 No 45 1.88 Yes 25 0.85 Yes -23 0.86 Yes 47 54.82 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 101309028 + NR_135229 PCNP 1 0.02 0.14 9 -0.25 0 18 4.37 No 67 -5.48 No 28 0.7 Yes -17 0.54 No 42 46.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 101309060 + NR_135229 PCNP 1 0.09 0.67 35 -9.67 81.99 17 5.95 Yes 4 0.89 Yes 0 0 No -20 0.48 No 36 58.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 47757326 + NM_006031 PCNT 1 0.99 0.43 25 11.41 85.18 26 5.48 No 13 0.2 No 0 0 No -25 0.77 Yes 45 92.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47766636 + NM_006031 PCNT 1 0.93 0.33 19 3.73 75.78 64 10.13 Yes 22 1.78 Yes 18 0.86 Yes -57 0.66 No 52 60.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 47771346 + NM_006031 PCNT 1 0.21 0.11 7 1.82 0 29 4.81 No 16 0.67 No 0 0 No -28 0.85 Yes 42 89.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47818151 + NM_006031 PCNT 1 25.91 7.81 71 -2.38 66.53 47 7.54 Yes 34 1.02 Yes 0 0 No -46 0.48 No 23 61.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 47847539 + NM_006031 PCNT 1 1.68 0.61 31 -1.81 0 36 6.46 Yes 51 -3.46 No 0 0 No -32 0.49 No 38 60.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 47850672 + NM_006031 PCNT 1 0.63 0.29 14 8.87 82.06 47 6.47 Yes 34 1.33 Yes 0 0 No -28 0.92 Yes 42 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47858149 + NM_006031 PCNT 1 0.19 0.1 7 2.32 70.54 26 5.48 No 13 0.66 No 0 0 No -24 0.74 Yes 45 74.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 47862822 + NM_006031 PCNT 1 0.46 0.17 9 10.07 84.77 24 6.95 Yes 11 1.33 Yes 0 0 No -23 0.92 Yes 47 93.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47864608 + NM_006031 PCNT 1 0.55 0.24 14 -9.65 69.36 54 9.27 Yes 41 1.35 Yes 0 0 No -53 0.9 Yes 17 96.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47865310 + NM_006031 PCNT 1 0.36 0.33 20 8.91 80.47 32 5.66 Yes 48 0.06 No 0 0 No -31 0.5 No 39 45.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 47865314 + NM_006031 PCNT 1 0.13 0.11 8 0.56 0 36 6 Yes 52 0.07 No 0 0 No -35 0.49 No 35 44.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 71383691 + NM_014982 PCNX1 1 1.07 0.61 30 8.11 80.9 33 5.66 Yes 56 0.59 No 0 0 No -32 0.46 No 40 62.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 71411236 + NM_014982 PCNX1 1 0.16 0.1 7 9.9 98.54 25 4.4 No 8 1.08 Yes 0 0 No -24 0.54 No 46 69.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 71418273 + NM_014982 PCNX1 1 0.14 0.15 10 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -16 0.47 No 54 74.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 71422301 + NM_014982 PCNX1 1 0.1 0.1 7 11.56 94.37 63 7.3 Yes 54 0.7 No 0 0 No -26 0.69 Yes 44 79.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 71427866 + NM_014982 PCNX1 1 0.19 0.19 12 7.93 87.72 14 6.7 Yes 1 1.29 Yes 0 0 No -25 0.73 Yes 45 50.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 71436548 + NM_014982 PCNX1 1 0.45 0.44 22 2.49 73.52 21 6.9 Yes 64 -1.9 No 23 0.91 Yes -20 0.5 No 46 46.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 71436575 + NM_014982 PCNX1 1 0.29 0.29 17 0.29 67.3 24 5.98 Yes 27 -3.05 No 23 0.91 Yes -23 0.7 Yes 47 68.97 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 71442252 + NM_014982 PCNX1 1 0.24 0.22 13 8.52 87.45 26 6.74 Yes 13 1.64 Yes 0 0 No -25 0.43 No 45 41.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 71442379 + NM_014982 PCNX1 1 0.6 0.61 30 4.66 74.47 26 4.99 No 13 0.85 Yes 0 0 No -25 0.56 No 44 49.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 71443744 + NM_014982 PCNX1 1 1.03 1.04 44 6.89 85.05 17 4.41 No 32 1.97 Yes 0 0 No -26 0.88 Yes 44 89.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71455268 + NM_014982 PCNX1 1 0.89 0.31 17 0.77 72.86 25 5.2 No 12 1.85 Yes 22 0.89 Yes -24 0.93 Yes 46 94.5 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 71455286 + NM_014982 PCNX1 1 11.97 4.38 70 0.11 77.24 26 4.87 No 30 1.83 Yes 0 0 No -25 0.91 Yes 45 87.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71470983 + NM_014982 PCNX1 1 0.62 0.21 13 9.15 78.6 27 6.48 Yes 14 2.42 Yes 0 0 No -26 0.91 Yes 44 92.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71479716 + NM_014982 PCNX1 1 0.48 0.54 28 12.28 86.85 18 4.9 No 15 2.2 Yes 27 0.8 Yes -27 0.64 No 43 92.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 71470983 + NM_014982 PCNX1 1 1.51 0.56 30 9.15 78.6 27 6.48 Yes 14 2.42 Yes 0 0 No -26 0.91 Yes 44 92.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71479716 + NM_014982 PCNX1 1 0.58 0.68 39 12.28 86.85 18 4.9 No 15 2.2 Yes 27 0.8 Yes -27 0.64 No 43 92.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 71479716 + NM_014982 PCNX1 1 0.13 0.17 10 12.28 86.85 18 4.9 No 15 2.2 Yes 27 0.8 Yes -27 0.64 No 43 92.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 71479716 + NM_014982 PCNX1 1 8.96 10.42 72 12.28 86.85 18 4.9 No 15 2.2 Yes 27 0.8 Yes -27 0.64 No 43 92.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 71479750 + NM_014982 PCNX1 1 0.38 0.42 26 3.44 71.4 26 4.93 No 49 2.14 Yes 0 0 No -25 0.75 Yes 57 31.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 71480328 + NM_014982 PCNX1 1 0.44 0.47 24 3.6 72.69 76 6.64 Yes 31 0.99 Yes 0 0 No -29 0.47 No 27 59.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 71485710 + NM_014982 PCNX1 1 0.15 0.17 9 -2 68.88 27 3.3 No 65 1.13 Yes 24 0.92 Yes -20 0.51 No 50 75.84 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 71513656 + NM_014982 PCNX1 1 2.28 1.29 48 0.21 66.47 63 8.91 Yes 50 0.81 Yes 32 0.36 Yes -27 0.88 Yes 43 60.81 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 71514528 + NM_014982 PCNX1 1 0.17 0.17 10 0.85 0 30 5.93 Yes 37 1.61 Yes 0 0 No -29 0.62 No 41 62.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 71515706 + NM_014982 PCNX1 1 4.04 3.35 69 9.39 81.62 34 6.89 Yes 21 1.71 Yes 0 0 No -33 0.84 Yes 37 95.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71517348 + NM_014982 PCNX1 1 1.95 1.56 51 8.44 91.76 27 5.44 No 14 0.85 Yes 24 0.96 Yes -26 0.93 Yes 44 94.31 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 71518622 + NM_014982 PCNX1 1 0.16 0.17 12 4.61 90.17 20 5.08 No 27 1.07 Yes 0 0 No -19 0.74 Yes 51 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71518605 + NM_014982 PCNX1 1 0.22 0.22 14 -3.5 0 11 3.87 No 10 1.07 Yes 0 0 No -23 0.71 Yes 47 82.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71520013 + NM_014982 PCNX1 1 0.91 0.9 38 3.41 0 47 7.9 Yes 58 0.99 Yes 44 0.19 Yes -46 0.65 No 26 78.17 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 71527384 + NM_014982 PCNX1 1 0.38 0.29 17 7.81 73.51 23 5.8 Yes 7 0.26 No 22 0.75 Yes -27 0.41 No 43 63.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 71545362 + NM_014982 PCNX1 1 0.38 0.29 18 8.03 93.82 16 5.82 Yes 3 1.15 Yes 20 0.6 Yes -20 0.42 No 40 44.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 71555952 + NM_014982 PCNX1 1 0.12 0.11 8 4.32 79.66 43 6.54 Yes 56 0.56 No 0 0 No -38 0.59 No 32 65.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 71555979 + NM_014982 PCNX1 1 0.42 0.36 21 5.18 79.29 31 5.54 No 57 0.38 No 0 0 No -31 0.71 Yes 39 86.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 71560460 + NM_014982 PCNX1 1 0.1 0.11 7 -0.46 70.61 54 7.33 Yes 41 0.66 No 0 0 No -53 0.45 No 17 58.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 71567406 + NM_014982 PCNX1 1 0.12 0.11 7 9.23 86.86 16 3.75 No 3 0.56 No 0 0 No -23 0.64 No 47 65.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 71568725 + NM_014982 PCNX1 1 0.32 0.29 18 7.78 93.04 16 5.03 No 70 1.17 Yes 0 0 No -21 0.75 Yes 49 77.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 233273484 - NM_014801 PCNX2 1 0.55 0.1 7 9.42 90.89 31 5.39 No 18 0.87 Yes 0 0 No -25 0.89 Yes 45 89.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 233279047 - NM_014801 PCNX2 1 0.51 0.11 7 -4.18 0 28 5.17 No 15 0.49 No 0 0 No -50 0.6 No 20 70.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 233337997 - NM_014801 PCNX2 1 1.77 0.25 13 5.93 90.92 22 5.1 No 9 1.33 Yes 21 0.94 Yes -21 0.85 Yes 49 96.71 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 233344357 - NM_014801 PCNX2 1 7.08 0.82 32 7.14 89.29 20 7.33 Yes 7 0.07 No 19 0.65 Yes -42 0.51 No 51 47.73 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 233372066 - NM_014801 PCNX2 1 6.66 0.64 34 5.06 82.63 29 5.37 No 8 1.2 Yes 0 0 No -24 0.68 Yes 46 83.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 233382241 - NM_014801 PCNX2 1 1.14 0.22 13 7.18 88.46 21 4.69 No 8 1.13 Yes 0 0 No -20 0.75 Yes 50 82.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 233395521 - NM_014801 PCNX2 1 1.9 0.36 23 8.09 94.56 25 3.84 No 1 0.53 No 0 0 No -24 0.54 No 45 58.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 233398869 - NM_014801 PCNX2 1 0.99 0.11 7 7.48 91.46 21 6.92 Yes 57 0.75 No 0 0 No -23 0.56 No 47 66.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 233407749 - NM_014801 PCNX2 1 9.27 0.94 38 5.32 88.72 26 5.19 No 0 0.06 No 0 0 No -25 0.71 Yes 45 58.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 233408884 - NM_014801 PCNX2 1 3.97 0.43 27 11.65 89.29 24 4.49 No 67 0.82 Yes 0 0 No -23 0.77 Yes 47 78.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 233430250 - NM_014801 PCNX2 1 2.02 0.19 14 8.26 92.65 29 7.01 Yes 16 1.57 Yes 0 0 No -28 0.85 Yes 42 93.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65387227 + NM_032223 PCNX3 1 19.75 9.15 72 2.68 78.86 26 6.5 Yes 13 2.06 Yes 0 0 No -25 0.89 Yes 45 88.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65387679 + NM_032223 PCNX3 1 0.24 0.18 11 7.42 90.19 25 5 No 12 1.01 Yes 0 0 No -24 0.85 Yes 46 93.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65388325 + NM_032223 PCNX3 1 0.58 0.5 27 4.42 83.75 29 5.65 Yes 31 1.37 Yes 0 0 No -28 0.93 Yes 42 97.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65389676 + NM_032223 PCNX3 1 45.05 21.42 72 1.13 69.26 26 7.4 Yes 13 0.08 No 26 0.83 Yes -25 0.86 Yes 45 69.37 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 65389694 + NM_032223 PCNX3 1 9.72 4.83 71 3.12 73.92 15 5.2 No 2 0.19 No 26 0.83 Yes -14 0.34 No 56 45.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 65389721 + NM_032223 PCNX3 1 0.95 0.43 23 -6.63 0 15 3.87 No 58 -2.77 No 0 0 No -32 0.79 Yes 38 30.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 65391226 + NM_032223 PCNX3 1 0.14 0.13 9 -1.05 73.27 23 4.79 No -1 0.02 No 0 0 No -22 0.71 Yes 48 68.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 65391691 + NM_032223 PCNX3 1 0.27 0.18 10 1.75 72.92 36 5.91 Yes 31 0.85 Yes 0 0 No -28 0.58 No 42 58.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65391991 + NM_032223 PCNX3 1 0.08 0.11 7 7.81 85.54 46 7.68 Yes 67 1.84 Yes 0 0 No -45 0.9 Yes 25 96.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65392623 + NM_032223 PCNX3 1 0.51 0.36 19 5.9 77.98 21 5.63 Yes 3 1.42 Yes 23 0.97 Yes -20 0.86 Yes 50 90.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65393097 + NM_032223 PCNX3 1 1.59 0.9 37 7.22 73.4 23 5.39 No 10 0.89 Yes 22 0.88 Yes -22 0.8 Yes 48 79.21 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65394145 + NM_032223 PCNX3 1 1.16 0.93 40 8.14 88.7 20 4.7 No 70 -2.15 No 0 0 No -22 0.86 Yes 48 79.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65394267 + NM_032223 PCNX3 1 0.54 0.44 26 6.62 84.38 16 4.64 No 65 0.47 No 0 0 No -18 0.47 No 52 44.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65394945 + NM_032223 PCNX3 1 0.52 0.36 20 8.66 79.14 23 5.39 No 10 1.47 Yes 0 0 No -22 0.89 Yes 48 93.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65394948 + NM_032223 PCNX3 1 0.23 0.14 9 3.15 70.81 26 5.66 Yes 13 1.47 Yes 0 0 No -25 0.91 Yes 45 91.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65401549 + NM_032223 PCNX3 1 0.93 0.68 32 8.71 88.05 24 6.16 Yes 11 1.54 Yes 23 0.82 Yes -23 0.69 Yes 47 83.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65403401 + NM_032223 PCNX3 1 0.87 0.43 20 0.93 81.13 13 4.9 No 0 1.11 Yes 0 0 No -19 0.47 No 51 32.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65403421 + NM_032223 PCNX3 1 8.78 3.71 70 5.79 74.81 16 5.2 No 3 2.02 Yes 0 0 No -17 0.4 No 50 51.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65403439 + NM_032223 PCNX3 1 0.31 0.13 9 6.38 81.53 14 5.2 No 21 2.02 Yes 0 0 No -33 0.4 No 52 50.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 60581699 + NM_001330177 PCNX4 1 0.29 0.18 11 -3.85 0 12 3.85 No 58 0.59 No 0 0 No -43 0.45 No 35 49.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 60585094 + NM_001330177 PCNX4 1 1.95 1.14 43 5.47 81.43 25 5.15 No 54 0.44 No 24 0.9 Yes -24 0.81 Yes 50 82.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 60585292 + NM_001330177 PCNX4 1 0.7 0.4 23 4.77 76.95 56 6.04 Yes 43 1.6 Yes 42 0.57 Yes -42 0.72 Yes 28 81.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 60600373 + NM_001330177 PCNX4 1 0.63 0.42 19 2.3 61.18 35 5.94 Yes 40 0.29 No 24 0.45 Yes -35 0.44 No 35 80.38 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 117076227 - NM_004716 PCSK7 1 0.99 0.94 48 3.68 73.89 32 6 Yes 19 0.69 No 0 0 No -31 0.85 Yes 39 73.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 117076891 - NM_004716 PCSK7 1 0.12 0.13 7 2.14 79.76 16 4.69 No 3 -0.22 No 0 0 No -19 0.83 Yes 51 37.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 117076979 - NM_004716 PCSK7 1 0.91 0.92 45 0.95 65.33 29 5.38 No 58 1.02 Yes 0 0 No -28 0.8 Yes 42 55.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 117078447 - NM_004716 PCSK7 1 0.18 0.1 7 1.45 0 26 6 Yes 13 1.72 Yes 0 0 No -25 0.7 Yes 45 81.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 117078452 - NM_004716 PCSK7 1 3.24 1.97 59 10.46 89.6 21 5.57 Yes 8 1.75 Yes 20 0.86 Yes -20 0.72 Yes 50 84.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 117079763 - NM_004716 PCSK7 1 0.51 0.47 22 -2.44 0 12 4 No 6 0.33 No 20 0.45 Yes -27 0.72 Yes 46 36.72 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 117079766 - NM_004716 PCSK7 1 0.26 0.25 12 -1.91 0 16 5.29 No 76 0.67 No 20 0.45 Yes -24 0.71 Yes 49 44.67 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 117079793 - NM_004716 PCSK7 1 0.43 0.4 21 4.67 76.09 29 5.24 No 49 0.66 No 20 0.45 Yes -28 0.75 Yes 42 61.17 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 117087961 - NM_004716 PCSK7 1 0.15 0.14 9 1.36 82.19 16 4.96 No 3 0.53 No 0 0 No -24 0.9 Yes 46 94.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 117094022 - NM_004716 PCSK7 1 0.26 0.22 9 -7.15 73.38 25 6.16 Yes 12 1.75 Yes 0 0 No -24 0.65 No 46 79.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 117094219 - NM_004716 PCSK7 1 0.42 0.36 18 0.31 74.4 23 5.2 No 74 -5.02 No 0 0 No -22 0.76 Yes 48 37.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 117094402 - NM_004716 PCSK7 1 0.14 0.1 7 7.61 77.19 19 5.96 Yes 6 1.46 Yes 0 0 No -23 0.58 No 47 82.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 117094672 - NM_004716 PCSK7 1 0.6 0.53 24 6.01 82.37 26 4.09 No 4 1.01 Yes 0 0 No -25 0.83 Yes 45 75.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 117095490 - NM_004716 PCSK7 1 0.79 0.75 35 9.62 83.11 28 5.7 Yes 73 -5.37 No 20 0.17 Yes -26 0.79 Yes 44 70.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 117096179 - NM_004716 PCSK7 1 0.79 0.67 31 5.78 78.73 57 9.75 Yes 44 1.12 Yes 0 0 No -22 0.6 No 48 49.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 117096794 - NM_004716 PCSK7 1 0.19 0.24 15 6.54 78.66 32 6.16 Yes 71 -5.11 No 0 0 No -25 0.59 No 38 39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 53852671 + NM_001102402 PCTP 1 4.36 2.75 66 8.99 86.71 59 6.93 Yes 46 0.96 Yes 30 0.17 Yes -30 0.66 No 24 57.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 53853123 + NM_001102402 PCTP 1 0.82 0.53 25 10.62 94.25 26 5.11 No 72 0.58 No 0 0 No -25 0.8 Yes 45 75.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 70489941 + NM_016297 PCYOX1 1 0.64 0.19 10 7.65 81.5 21 6.16 Yes 8 1.28 Yes 0 0 No -20 0.77 Yes 50 86.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 148742529 + NM_001301054 PCYOX1L 1 3.55 0.44 25 8.94 89.05 25 5.99 Yes 62 -2.49 No 24 0.86 Yes -24 0.95 Yes 46 95.86 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 148746899 + NM_001301054 PCYOX1L 1 0.63 0.19 13 -0.05 68.38 13 6.46 Yes 0 0.67 No 28 0.72 Yes -21 0.38 No 35 32.16 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 195967998 - NM_005017 PCYT1A 1 0.13 0.15 9 7.77 94.37 39 7.48 Yes 26 1.87 Yes 0 0 No -38 0.95 Yes 32 95.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195968483 - NM_005017 PCYT1A 1 3.63 4.42 71 -3.73 58.61 51 9.06 Yes 38 0.68 No 25 0.67 Yes -51 0.83 Yes 19 87.58 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 195968942 - NM_005017 PCYT1A 1 0.4 0.58 31 3.72 79.51 27 5.34 No 51 0.89 Yes 0 0 No -26 0.73 Yes 18 59.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 195973543 - NM_005017 PCYT1A 1 0.12 0.18 12 1.95 77.89 24 5.1 No 11 0.84 Yes 0 0 No -23 0.9 Yes 47 91.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195974357 - NM_005017 PCYT1A 1 0.09 0.15 9 0.36 66.02 25 4.26 No 76 -5.39 No 18 0.76 Yes -16 0.48 No 54 51.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 195974503 - NM_005017 PCYT1A 1 0.17 0.26 16 0.48 0 18 4.58 No 74 -3.23 No 0 0 No -17 0.62 No 53 53.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 195983746 - NM_005017 PCYT1A 1 0.23 0.43 26 3.78 81.33 29 7.53 Yes 16 0.48 No 0 0 No -28 0.65 No 42 73.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 195994237 - NM_005017 PCYT1A 1 0.16 0.18 13 7.63 83.48 30 4.55 No 7 1.08 Yes 0 0 No -29 0.91 Yes 41 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195994418 - NM_005017 PCYT1A 1 0.59 0.67 33 9.21 91.26 23 7.33 Yes 64 1.72 Yes 0 0 No -22 0.92 Yes 48 95.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79862840 - NM_001256433 PCYT2 1 0.38 0.29 14 3.73 71.67 19 5.83 Yes 34 1.19 Yes 21 0.36 Yes -18 0.62 No 52 74.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 79865134 - NM_001256433 PCYT2 1 13.62 11.17 72 10.18 77.35 33 5.92 Yes 20 1.7 Yes 32 0.88 Yes -32 0.93 Yes 38 96.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79868892 - NM_001256433 PCYT2 1 0.52 0.19 11 6.8 81.74 22 6.55 Yes 9 1.14 Yes 21 0.88 Yes -21 0.92 Yes 49 81.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 98994037 - NM_014891 PDAP1 1 0.11 0.47 26 9.33 84.39 29 6.99 Yes 16 0.9 Yes 0 0 No -28 0.84 Yes 42 88.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98995002 - NM_014891 PDAP1 1 0.08 0.38 19 12.09 90.48 33 6.01 Yes 31 0.48 No 0 0 No -28 0.61 No 38 62.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 98997651 - NM_014891 PDAP1 1 0.18 0.57 27 10.82 87.69 16 5.92 Yes 32 0.01 No 0 0 No -30 0.57 No 42 66.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 98998042 - NM_014891 PDAP1 1 0.02 0.13 8 -3.03 0 9 3.87 No 27 0.48 No 0 0 No -33 0.31 No 37 51.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99001149 - NM_014891 PDAP1 1 0.22 0.74 34 9.18 97.39 40 6.63 Yes 64 -2.56 No 27 0.34 Yes -39 0.51 No 31 65.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242793447 - NM_005018 PDCD1 1 2.31 0.51 28 2.63 72.74 29 8.54 Yes 16 2.21 Yes 0 0 No -28 0.9 Yes 42 91.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242794230 - NM_005018 PDCD1 1 0.5 0.11 7 8.29 87.08 66 9.11 Yes 53 2.59 Yes 0 0 No -33 0.74 Yes 37 89.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242795091 - NM_005018 PDCD1 1 2.2 0.39 24 9.21 81.53 14 6.16 Yes 49 1.84 Yes 0 0 No -22 0.44 No 48 70.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 167413509 - NM_007217 PDCD10 1 0.08 0.29 15 -5.42 78.11 24 4.89 No 51 -2.09 No 0 0 No -23 0.71 Yes 35 50.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 167414932 - NM_007217 PDCD10 1 0.06 0.28 16 4.73 65.87 27 6.91 Yes 14 1.05 Yes 25 0.78 Yes -26 0.56 No 44 57.6 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 167415767 - NM_007217 PDCD10 1 0.07 0.28 17 6.78 77.8 45 6.58 Yes 20 0.54 No 32 0.38 Yes -32 0.37 No 38 43.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 167422680 - NM_007217 PDCD10 1 0.26 1.15 52 -1.96 0 25 5.04 No 12 0.06 No 0 0 No -30 0.86 Yes 40 90.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 167428255 - NM_007217 PDCD10 1 0.02 0.1 7 12.3 94.25 35 4.72 No 35 0.63 No 0 0 No -26 0.84 Yes 47 26.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 167443262 - NM_007217 PDCD10 1 13.43 1.25 48 8.08 78.65 35 6.27 Yes 22 2.43 Yes 26 0.93 Yes -30 0.8 Yes 40 85.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 105157237 + NM_014976 PDCD11 1 0.17 0.25 16 7.53 92.95 15 5.14 No 2 1.34 Yes 0 0 No -26 0.6 No 44 59.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 105157375 + NM_014976 PDCD11 1 0.18 0.28 16 4.54 77.08 20 6.71 Yes 7 1.16 Yes 0 0 No -19 0.83 Yes 51 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105159403 + NM_014976 PDCD11 1 0.62 1.13 46 6.28 74.6 23 4.69 No 69 -5.84 No 22 0.9 Yes -22 0.92 Yes 48 95.34 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 105159490 + NM_014976 PDCD11 1 2.78 4.58 72 6.17 84.17 29 5.39 No 61 0.79 Yes 0 0 No -25 0.6 No 45 61.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 105160528 + NM_014976 PDCD11 1 0.71 1.1 44 7.9 93.89 49 7.05 Yes 40 2.16 Yes 0 0 No -43 0.37 No 27 40.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 105161515 + NM_014976 PDCD11 1 0.42 0.69 31 1.39 84.41 21 5.99 Yes 8 0.88 Yes 0 0 No -20 0.69 Yes 50 67.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 105176954 + NM_014976 PDCD11 1 0.29 0.29 18 2.89 0 39 8.97 Yes 26 0.79 Yes 0 0 No -36 0.53 No 34 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 105177373 + NM_014976 PDCD11 1 0.08 0.11 7 7.13 81.28 27 5.4 No 10 0.67 No 0 0 No -22 0.8 Yes 48 86.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 105183304 + NM_014976 PDCD11 1 0.1 0.15 8 -1.84 0 31 5.72 Yes 37 0.96 Yes 0 0 No -27 0.85 Yes 43 77.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105191019 + NM_014976 PDCD11 1 0.41 0.54 26 5.19 83.71 23 5.13 No 24 0.72 No 0 0 No -22 0.88 Yes 48 93.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 105194537 + NM_014976 PDCD11 1 0.41 0.46 23 9.47 82.49 22 5.72 Yes 9 0.72 No 23 0.89 Yes -26 0.84 Yes 49 74.21 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 105194653 + NM_014976 PDCD11 1 0.17 0.21 13 -1.39 0 29 6.56 Yes 16 2.38 Yes 0 0 No -28 0.92 Yes 42 90.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105195214 + NM_014976 PDCD11 1 0.14 0.24 13 0.33 0 59 7.37 Yes 46 0.67 No 0 0 No -38 0.7 Yes 32 74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 105197085 + NM_014976 PDCD11 1 0.13 0.26 15 1.54 0 18 4.44 No 76 0.62 No 0 0 No -18 0.57 No 52 37.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 105197967 + NM_014976 PDCD11 1 0.19 0.36 18 3.81 86.24 33 6.05 Yes 4 1.3 Yes 0 0 No -32 0.94 Yes 38 96.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105200132 + NM_014976 PDCD11 1 0.99 2.03 57 5.56 81.23 27 5.74 Yes 69 0.14 No 0 0 No -26 0.57 No 46 67.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 105201109 + NM_014976 PDCD11 1 0.09 0.15 10 7.73 91.36 22 6.44 Yes 9 1.14 Yes 0 0 No -21 0.94 Yes 49 91.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105201585 + NM_014976 PDCD11 1 0.1 0.19 12 -8.07 75.92 25 5.57 Yes 29 0.9 Yes 0 0 No -24 0.93 Yes 46 89.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105201966 + NM_014976 PDCD11 1 23.28 21.69 72 6.57 78.02 23 4.73 No 10 1.45 Yes 25 0.97 Yes -22 0.96 Yes 48 96.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 105202923 + NM_014976 PDCD11 1 0.13 0.15 10 -4.9 73.3 19 7.56 Yes 6 2.16 Yes 0 0 No -26 0.87 Yes 44 91.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105203431 + NM_014976 PDCD11 1 0.27 0.42 19 9.65 86.48 16 6.58 Yes -3 0.46 No 0 0 No -28 0.69 Yes 42 82.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 5526648 + NM_025239 PDCD1LG2 1 0.45 0.21 12 3.65 82.27 25 5.92 Yes 33 1.06 Yes 0 0 No -24 0.89 Yes 46 84.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5528489 + NM_025239 PDCD1LG2 1 3.68 1.57 54 9.24 86.81 24 7.35 Yes 11 1.36 Yes 0 0 No -23 0.93 Yes 47 93.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5557622 + NM_025239 PDCD1LG2 1 1.41 0.38 21 2.87 0 36 6.32 Yes 71 0.91 Yes 0 0 No -35 0.83 Yes 35 86.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170892712 - NM_001199461 PDCD2 1 2.55 6.49 72 9.28 90.32 24 3.79 No 72 0.45 No 23 0.91 Yes -23 0.83 Yes 47 90.37 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 170892829 - NM_001199461 PDCD2 1 0.34 0.89 38 5.17 0 10 4 No 21 0.36 No 0 0 No -32 0.48 No 38 46.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 34900071 + NM_032346 PDCD2L 1 0.69 0.29 19 -1.27 0 9 3.87 No 7 0.84 Yes 0 0 No -23 0.91 Yes 43 74.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 34902331 + NM_032346 PDCD2L 1 0.27 0.19 13 7.47 85.23 22 5.71 Yes 65 1.34 Yes 0 0 No -21 0.71 Yes 49 90.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 112641032 + NM_145341 PDCD4 1 469.74 48.68 72 1.12 66.66 25 4.18 No 12 1.33 Yes 29 0.88 Yes -29 0.67 Yes 41 87.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 112641032 + NM_145341 PDCD4 1 7.3 0.72 36 1.12 66.66 25 4.18 No 12 1.33 Yes 29 0.88 Yes -29 0.67 Yes 41 87.96 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 112642769 + NM_145341 PDCD4 1 0.09 0.29 15 -2.16 0 12 4.24 No 8 1.31 Yes 0 0 No -52 0.74 Yes 18 88.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 112643793 + NM_145341 PDCD4 1 0.11 0.39 19 7.89 84.32 24 6.4 Yes 11 0.09 No 0 0 No -23 0.95 Yes 47 95.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 112645013 + NM_145341 PDCD4 1 0.07 0.29 15 -9.78 64.71 59 6.64 Yes 17 1.38 Yes 0 0 No -30 0.39 No 41 57.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 33073275 + NM_004708 PDCD5 1 0.05 0.21 12 4.95 75 54 7.35 Yes 41 1.1 Yes 0 0 No -22 0.75 Yes 48 54.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 33075227 + NM_004708 PDCD5 1 0.08 0.38 20 10.14 84.65 13 4.65 No 0 0.94 Yes 0 0 No -22 0.55 No 48 70.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 33075863 + NM_004708 PDCD5 1 0.61 2.82 69 -6.3 0 17 4.12 No 15 1.34 Yes 0 0 No -37 0.71 Yes 33 71.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 33078166 + NM_004708 PDCD5 1 0.02 0.18 12 2.2 0 11 4.12 No 20 2.09 Yes 0 0 No -32 0.84 Yes 38 88.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 314533 + NM_013232 PDCD6 1 0.03 0.11 7 2.5 83.58 23 4.99 No 10 0.22 No 0 0 No -22 0.52 No 37 74.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 313815 + NM_013232 PDCD6 1 1.12 3.93 70 3.43 0 57 7.46 Yes 76 0.62 No 27 0.36 Yes -25 0.78 Yes 45 80.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 314533 + NM_013232 PDCD6 1 0.71 2.57 68 2.5 83.58 23 4.99 No 10 0.22 No 0 0 No -22 0.52 No 37 74.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 33852588 + NM_001162429 PDCD6IP 1 0.54 0.99 46 8.02 80.25 14 5.39 No 33 1.65 Yes 26 0.35 Yes -28 0.43 No 48 42.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 33853565 + NM_001162429 PDCD6IP 1 0.05 0.1 7 -8.14 0 22 5.33 No 9 1 Yes 0 0 No -21 0.4 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 33865770 + NM_001162429 PDCD6IP 1 0.45 0.94 43 4.8 83.57 36 7.56 Yes 23 1.8 Yes 0 0 No -31 0.48 No 39 62.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 33866731 + NM_001162429 PDCD6IP 1 0.06 0.13 8 2.76 77.1 26 5.38 No 76 0.42 No 26 0.66 Yes -25 0.81 Yes 45 75.65 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 33870344 + NM_001162429 PDCD6IP 1 5.61 0.33 17 6.63 99.55 18 4.9 No -4 -1.77 No 22 0.03 Yes -25 0.36 No 53 85.02 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 33869113 + NM_001162429 PDCD6IP 1 8.33 0.51 27 3.77 79.87 21 6.73 Yes 8 1.44 Yes 0 0 No -20 0.84 Yes 50 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 33870344 + NM_001162429 PDCD6IP 1 2528.25 157.97 72 6.63 99.55 18 4.9 No -4 -1.77 No 22 0.03 Yes -25 0.36 No 53 85.02 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 33870347 + NM_001162429 PDCD6IP 1 1.62 0.11 8 -9.71 84.07 21 5.2 No -1 -1.97 No 0 0 No -20 0.54 No 50 85.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 33886912 + NM_001162429 PDCD6IP 1 0.04 0.11 8 -5.25 83.07 38 7.07 Yes 43 0.63 No 0 0 No -22 0.65 No 33 59.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 33895832 + NM_001162429 PDCD6IP 1 0.08 0.18 10 -2.95 0 16 3.87 No 41 1.36 Yes 0 0 No -27 0.66 No 43 71.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 65421503 - NM_005707 PDCD7 1 0.11 0.13 8 -0.18 0 9 3.87 No 67 1.14 Yes 0 0 No -28 0.95 Yes 42 97.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 125583099 - NM_005388 PDCL 1 2.17 1.74 52 10.19 89.4 28 7.68 Yes 15 2.4 Yes 27 0.95 Yes -27 0.91 Yes 43 95.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 125585362 - NM_005388 PDCL 1 0.89 0.64 29 4.85 83.62 27 5.1 No -4 0.5 No 0 0 No -26 0.85 Yes 44 85.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 101188165 + NM_024065 PDCL3 1 0.08 0.14 8 6.12 77.17 45 6.13 Yes 76 -6.01 No 0 0 No -27 0.71 Yes 43 48.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 767369 - NM_001318822 PDDC1 1 1.07 0.57 30 2.91 0 26 5.38 No 56 0.14 No 19 0.51 Yes -24 0.33 No 46 81.42 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 767374 - NM_001318822 PDDC1 1 6.27 3.35 62 7.44 92.65 21 4.9 No 51 0.14 No 19 0.51 Yes -19 0.37 No 51 81.86 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 770399 - NM_001318822 PDDC1 1 3.01 1.65 55 0.92 70.55 16 5.18 No 3 0.24 No 22 0.69 Yes -21 0.43 No 49 48.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 771213 - NM_001318822 PDDC1 1 2.56 1.38 53 2.64 69.1 26 4.5 No NA NA NA 25 0.81 Yes -23 0.6 No 45 59.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 771468 - NM_001318822 PDDC1 1 2.19 1.24 49 5.89 67.9 35 7.38 Yes 22 1.99 Yes 20 0.86 Yes -34 0.41 No 36 78.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 771689 - NM_001318822 PDDC1 1 0.33 0.19 12 6.2 79.34 22 3.81 No 14 1.17 Yes 0 0 No -26 0.57 No 44 53.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10561467 + NM_001243121 PDE4A 1 1.58 0.24 14 8.79 88.28 19 5.48 No 68 1.26 Yes 25 0.8 Yes -23 0.72 Yes 47 61.43 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 10561507 + NM_001243121 PDE4A 1 2.71 0.44 24 1.8 74.66 29 6.21 Yes 20 0.85 Yes 0 0 No -32 0.62 No 38 81.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 10568325 + NM_001243121 PDE4A 1 1.88 0.35 19 2.88 73.91 39 8.94 Yes 26 1.27 Yes 0 0 No -38 0.54 No 32 82.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 10571683 + NM_001243121 PDE4A 1 0.57 0.15 9 2.41 0 27 8.59 Yes 14 1.78 Yes 0 0 No -26 0.85 Yes 44 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10572854 + NM_001243121 PDE4A 1 0.7 0.24 13 6 90.92 28 5.29 No 15 -0.13 No 0 0 No -27 0.77 Yes 43 51.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 66826372 + NM_001297440 PDE4B 1 0.17 0.19 12 4.84 90.5 16 4.53 No 3 0.91 Yes 0 0 No -24 0.66 Yes 46 68.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 66631695 - NM_002603 PDE7A 1 0.49 1.14 46 2.58 89.66 21 4.69 No 47 1.4 Yes 0 0 No -24 0.7 Yes 46 85.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 66633533 - NM_002603 PDE7A 1 0.4 0.9 36 8.42 88.55 23 5 No 10 1.11 Yes 0 0 No -22 0.89 Yes 48 96.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 66637076 - NM_002603 PDE7A 1 1.08 1.82 56 9.38 86.19 20 5.1 No 7 0.2 No 0 0 No -19 0.47 No 47 46.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 66641369 - NM_002603 PDE7A 1 0.1 0.19 13 6.23 89.51 38 6.13 Yes 6 1.03 Yes 0 0 No -31 0.51 No 39 71.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 66643867 - NM_002603 PDE7A 1 0.34 0.68 34 5.67 85.44 31 5.66 Yes 18 1.69 Yes 30 0.91 Yes -30 0.82 Yes 40 95.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 66648608 - NM_002603 PDE7A 1 0.17 0.36 21 8.27 84.54 30 6.86 Yes 42 0.31 No 0 0 No -29 0.83 Yes 41 84.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 66649699 - NM_002603 PDE7A 1 0.22 0.49 26 6.13 80.26 40 4.52 No 9 1.17 Yes 0 0 No -21 0.48 No 49 37.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 66687135 - NM_002603 PDE7A 1 0.07 0.11 8 8.75 85.65 40 6.12 Yes 27 0.98 Yes 0 0 No -39 0.54 No 31 73.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 66693183 - NM_002603 PDE7A 1 4.82 5.83 72 6.6 77.87 22 5.47 No 31 1.7 Yes 21 0.8 Yes -21 0.89 Yes 49 89.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 85618888 + NM_002605 PDE8A 1 0.23 0.13 7 3.87 76.6 25 6.06 Yes 12 0.89 Yes 0 0 No -24 0.75 Yes 50 66.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 85619074 + NM_002605 PDE8A 1 0.21 0.13 8 7.26 81.37 28 4.37 No 40 0.81 Yes 22 0.64 Yes -27 0.59 No 42 62.41 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 85632566 + NM_002605 PDE8A 1 0.6 0.17 9 -1.05 0 28 6.63 Yes 15 1.2 Yes 29 0.75 Yes -27 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 85633948 + NM_002605 PDE8A 1 1.95 1.03 37 6.52 73.25 31 6.78 Yes 53 1.16 Yes 22 0.6 Yes -38 0.5 No 32 77.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 85635591 + NM_002605 PDE8A 1 0.42 0.24 12 7.09 84.03 53 7.59 Yes 52 0.48 No 0 0 No -52 0.62 No 18 81.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 85638756 + NM_002605 PDE8A 1 0.28 0.18 9 4.29 84.83 17 6.08 Yes 4 1.19 Yes 0 0 No -30 0.43 No 54 61.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 85645776 + NM_002605 PDE8A 1 0.18 0.11 8 4.12 81.38 28 5.83 Yes 15 0.81 Yes 0 0 No -27 0.63 No 43 73.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 85658658 + NM_002605 PDE8A 1 0.32 0.14 10 1.87 0 25 6.16 Yes 12 1.6 Yes 35 0.77 Yes -24 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 85659280 + NM_002605 PDE8A 1 1.53 1.44 52 2.68 59.52 41 5.43 No 6 0.79 Yes 0 0 No -37 0.76 Yes 33 70.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 85663704 + NM_002605 PDE8A 1 2.53 1.51 48 5.24 72.86 41 5.71 Yes 49 0.3 No 0 0 No -30 0.72 Yes 40 77.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 85663761 + NM_002605 PDE8A 1 0.4 0.18 10 3.22 59.97 26 5.63 Yes 13 0.29 No 0 0 No -25 0.67 Yes 45 78.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 85666267 + NM_002605 PDE8A 1 0.25 0.13 8 -2.52 74.14 16 4.67 No 40 0.51 No 26 0.67 Yes -18 0.7 Yes 59 48.12 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 19369377 + NM_001173454 PDHA1 1 1.2 4.04 70 6.31 74.26 32 4.81 No 19 -2.25 No 27 0.65 Yes -27 0.84 Yes 43 89.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 58415669 - NM_001315536 PDHB 1 0.18 0.38 22 10.57 89.91 9 5.29 No 42 0.46 No 29 0.6 Yes -29 0.86 Yes 41 66.05 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 34973530 + NM_001135024 PDHX 1 0.41 0.5 25 8.74 95.39 38 6.1 Yes 25 0.11 No 0 0 No -37 0.85 Yes 33 78.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 34991667 + NM_001135024 PDHX 1 0.09 0.13 8 5.62 75.86 55 5.83 Yes 42 0.47 No 26 0.85 Yes -57 0.84 Yes 13 80.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 34992202 + NM_001135024 PDHX 1 0.09 0.1 7 2.23 80.21 17 4.8 No 28 0.88 Yes 0 0 No -40 0.48 No 48 46.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 34993969 + NM_001135024 PDHX 1 0.41 0.38 21 3.64 0 29 7.48 Yes 16 1.08 Yes 0 0 No -28 0.83 Yes 42 84.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 35001919 + NM_001135024 PDHX 1 0.13 0.14 9 5.91 91.97 31 5.23 No 48 1.05 Yes 0 0 No -30 0.52 No 40 62.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 35006874 + NM_001135024 PDHX 1 0.24 0.26 18 3.11 77.35 30 6 Yes 51 1.68 Yes 0 0 No -29 0.76 Yes 41 60.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 35016521 + NM_001135024 PDHX 1 0.34 0.42 18 3.58 87.94 16 4.81 No -1 0.75 No 0 0 No -24 0.84 Yes 51 79.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44062452 + NM_005313 PDIA3 1 0.02 0.31 20 -2.25 0 68 7.19 Yes 10 1.16 Yes 30 0.79 Yes -30 0.38 No 40 49.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 44062722 + NM_005313 PDIA3 1 0.03 0.47 27 -25.3 0 23 6.49 Yes 66 1.57 Yes 0 0 No -22 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 148703134 - NM_004911 PDIA4 1 0.05 0.43 21 -1.83 0 19 4.58 No 22 1.98 Yes 0 0 No -34 0.83 Yes 36 71.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148703149 - NM_004911 PDIA4 1 5.03 42.83 72 7.13 77.06 20 6.56 Yes 7 2 Yes 22 0.85 Yes -19 0.85 Yes 51 93.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 148710773 - NM_004911 PDIA4 1 0.07 0.74 32 10.96 90.44 28 5.97 Yes 45 0.88 Yes 0 0 No -33 0.47 No 37 70.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 148711253 - NM_004911 PDIA4 1 0.02 0.31 17 3.76 87.92 19 5 No 63 0.18 No 0 0 No -21 0.66 No 49 68.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148713389 - NM_004911 PDIA4 1 0.06 0.75 33 7.68 84.53 26 4.72 No 6 0.09 No 0 0 No -25 0.5 No 45 42.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148714674 - NM_004911 PDIA4 1 0.01 0.11 8 -0.88 77.34 168 5.25 No 45 0.15 No 0 0 No -23 0.33 No 35 38.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148725085 - NM_004911 PDIA4 1 0.14 0.76 37 10.18 84.4 9 5.67 Yes -3 -0.84 No 27 0.81 Yes -27 0.9 Yes 43 93.48 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 122826664 + NR_028444 PDIA5 1 0.32 0.19 11 9.32 88.27 18 7.88 Yes 5 1.5 Yes 0 0 No -27 0.67 Yes 43 44.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 122842182 + NR_028444 PDIA5 1 0.97 0.31 20 7.98 94.84 21 5.84 Yes 8 0.85 Yes 0 0 No -20 0.61 No 46 48.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 10924500 - NM_001282705 PDIA6 1 0.11 0.76 34 5.29 91.29 23 3.91 No -3 0.92 Yes 0 0 No -23 0.64 No 45 66.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 10924602 - NM_001282705 PDIA6 1 0.09 0.65 28 4.87 73.06 33 4.74 No 13 1.19 Yes 0 0 No -25 0.86 Yes 45 80.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 10925088 - NM_001282705 PDIA6 1 0.02 0.21 13 -10.37 63.67 15 6.03 Yes 59 0.59 No 0 0 No -30 0.73 Yes 40 66.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 10925153 - NM_001282705 PDIA6 1 0.05 0.47 25 -11.44 0 40 6.83 Yes 27 0.59 No 0 0 No -40 0.54 No 30 73.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 10927565 - NM_001282705 PDIA6 1 0.04 0.35 23 -7.66 0 23 4.8 No 73 0.92 Yes 0 0 No -22 0.78 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 10928893 - NM_001282705 PDIA6 1 0.02 0.22 13 -12.31 62.68 58 9.14 Yes 45 0.53 No 0 0 No -34 0.55 No 36 79.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 10932047 - NM_001282705 PDIA6 1 0.02 0.21 12 -4.4 0 29 6.16 Yes 10 -2.18 No 0 0 No -28 0.45 No 42 48.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 10933136 - NM_001282705 PDIA6 1 0.01 0.1 7 2.98 90.75 21 4.8 No 49 -3.72 No 0 0 No -21 0.7 Yes 49 62.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 10941238 - NM_001282705 PDIA6 1 0.05 0.44 26 6.28 86.16 20 7.14 Yes 7 1.41 Yes 0 0 No -19 0.72 Yes 51 89.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 173423858 + NR_103731 PDK1 1 0.91 0.5 24 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -16 0.49 No 54 73.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 173427468 + NR_103731 PDK1 1 18.53 12 71 1.76 81.62 25 6.02 Yes 48 0.77 No 24 0.9 Yes -24 0.58 No 46 82.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 173428779 + NR_103731 PDK1 1 0.46 0.26 14 9.21 80.88 29 5.92 Yes 16 1.25 Yes 28 0.9 Yes -28 0.85 Yes 42 90.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 173431927 + NR_103731 PDK1 1 1.03 0.83 32 6.55 83.6 38 8.12 Yes 25 1.51 Yes 0 0 No -31 0.36 No 33 43.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 173446661 + NR_103731 PDK1 1 1.05 0.82 36 10.66 86.62 44 6.82 Yes 42 1.33 Yes 0 0 No -35 0.53 No 29 68.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 173446822 + NR_103731 PDK1 1 1.7 1.25 43 4.75 85.02 17 4.9 No 4 1.24 Yes 0 0 No -20 0.57 No 50 75.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 173446825 + NR_103731 PDK1 1 0.23 0.15 9 2.24 80.12 20 5.05 No 7 1.21 Yes 0 0 No -23 0.58 No 47 78.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 173449330 + NR_103731 PDK1 1 0.85 0.61 28 9.5 93.45 38 7.86 Yes 37 0.8 Yes 0 0 No -37 0.82 Yes 33 87.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 173455036 + NR_103731 PDK1 1 0.83 0.83 35 6.48 87.55 35 6.4 Yes 57 0.63 No 0 0 No -34 0.56 No 45 61.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 173460541 + NR_103731 PDK1 1 2.01 1.79 55 -2.61 0 12 3.85 No 56 1.88 Yes 27 0.71 Yes -12 0.72 Yes 59 43.36 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 48185522 + NM_001199898 PDK2 1 1.26 0.1 7 1.55 78.14 41 5.37 No 17 2.16 Yes 0 0 No -29 0.79 Yes 41 83.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 24523373 + NM_001142386 PDK3 1 1.04 0.68 29 5.55 71.27 31 5.45 No 12 1.67 Yes 0 0 No -24 0.76 Yes 46 74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96998429 - NM_020992 PDLIM1 1 0.01 0.13 7 -4.78 53.89 22 4.79 No 23 1.16 Yes 0 0 No -35 0.58 No 35 76.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 96998460 - NM_020992 PDLIM1 1 0.02 0.14 8 3.96 67.48 38 6.16 Yes 19 0.45 No 21 0.76 Yes -31 0.91 Yes 39 93.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 97006997 - NM_020992 PDLIM1 1 0.03 0.28 15 10.58 96.03 31 4.51 No 59 -3.28 No 0 0 No -26 0.75 Yes 44 80.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97019931 - NM_020992 PDLIM1 1 0.02 0.22 13 8.63 93.77 17 5.78 Yes 4 1.81 Yes 0 0 No -22 0.57 No 48 53.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 97023818 - NM_020992 PDLIM1 1 0.02 0.32 22 -12.1 70.57 30 7.87 Yes 5 1.5 Yes 0 0 No -29 0.86 Yes 41 88.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 95376969 + NM_001011516 PDLIM5 1 1.12 1.14 42 5.61 82.85 25 7.05 Yes 71 0.91 Yes 24 0.68 Yes -24 0.5 No 46 47.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 95377394 + NM_001011516 PDLIM5 1 3.87 3.86 66 6.13 93.18 28 5.29 No 70 0.01 No 27 0.81 Yes -27 0.77 Yes 43 80.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 95380921 + NM_001011516 PDLIM5 1 1.01 1.04 42 6.71 88.09 34 6.75 Yes 50 0.82 Yes 0 0 No -33 0.48 No 36 65.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 95405145 + NM_001011516 PDLIM5 1 0.22 0.24 16 2.05 65.58 68 7.91 Yes 44 1.69 Yes 0 0 No -56 0.71 Yes 14 80.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 95441243 + NM_001011516 PDLIM5 1 0.2 0.21 12 9.02 88.24 28 5.54 No 35 0.87 Yes 0 0 No -26 0.73 Yes 44 76.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 95464337 + NM_001011516 PDLIM5 1 0.18 0.18 11 5.22 88.02 28 4.79 No 39 -2.07 No 0 0 No -23 0.66 No 47 67.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 95469030 + NM_001011516 PDLIM5 1 0.16 0.18 9 4.59 86.6 37 6.93 Yes 24 0.96 Yes 0 0 No -23 0.82 Yes 47 63.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 95470941 + NM_001011516 PDLIM5 1 2.94 3.01 60 2.49 76.81 46 8.4 Yes 33 1.19 Yes 19 0.26 Yes -45 0.65 No 25 86.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 95470944 + NM_001011516 PDLIM5 1 12.03 12.44 70 -0.94 74.43 49 8.57 Yes 36 1.18 Yes 19 0.26 Yes -48 0.6 No 22 85.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 95474887 + NM_001011516 PDLIM5 1 0.1 0.1 7 6.63 84.2 28 4.96 No 3 1.01 Yes 0 0 No -20 0.69 Yes 50 89.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176914875 - NR_103804 PDLIM7 1 0.31 0.14 9 5.69 82.66 18 5.25 No 5 1 Yes 0 0 No -24 0.7 Yes 46 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176918422 - NR_103804 PDLIM7 1 1.07 0.38 21 12.32 95 80 10.63 Yes 67 3.4 Yes 30 0.82 Yes -30 0.79 Yes 40 80.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176918422 - NR_103804 PDLIM7 1 8.06 2.39 59 12.32 95 80 10.63 Yes 67 3.4 Yes 30 0.82 Yes -30 0.79 Yes 40 80.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176918978 - NR_103804 PDLIM7 1 0.41 0.13 9 5 85.43 13 5.29 No NA NA NA 21 0.83 Yes -21 0.89 Yes 49 90.33 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176924160 - NR_103804 PDLIM7 1 0.2 0.1 7 11.07 90.72 15 5.18 No 17 -0.09 No 0 0 No -21 0.79 Yes 49 78.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2588619 + NM_002613 PDPK1 1 4.82 2.07 59 8.95 83.6 25 6.24 Yes 12 0.94 Yes 24 0.89 Yes -24 0.69 Yes 46 80.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2606110 + NM_002613 PDPK1 1 0.25 0.13 7 2 0 24 4.47 No 37 0.6 No 0 0 No -31 0.67 Yes 39 65.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 2608430 + NM_002613 PDPK1 1 0.37 0.35 18 -0.18 59.57 47 8.68 Yes 34 2.11 Yes 0 0 No -46 0.82 Yes 24 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2611746 + NM_002613 PDPK1 1 0.66 0.58 25 6.74 77.16 25 5.57 Yes 20 0.42 No 29 0.93 Yes -24 0.84 Yes 46 91.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2620388 + NM_002613 PDPK1 1 0.15 0.15 10 2.38 76.12 47 6.93 Yes 11 0.27 No 23 0.87 Yes -23 0.73 Yes 47 80.87 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2621074 + NM_002613 PDPK1 1 0.19 0.22 13 11.91 91.9 39 6.23 Yes 26 0.64 No 27 0.79 Yes -27 0.44 No 38 57.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 2631300 + NM_002613 PDPK1 1 0.41 0.43 22 1.84 0 48 9.43 Yes -3 -1.12 No 42 0.47 Yes -47 0.74 Yes 23 93.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2631300 + NM_002613 PDPK1 1 0.27 0.28 13 1.84 0 48 9.43 Yes -3 -1.12 No 42 0.47 Yes -47 0.74 Yes 23 93.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2647659 + NM_002613 PDPK1 1 0.19 0.25 13 2.79 0 14 4.11 No 16 1.34 Yes 0 0 No -28 0.81 Yes 42 77.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70155688 + NM_017990 PDPR 1 0.46 0.17 9 10.01 85.05 36 6.83 Yes 23 2.09 Yes 0 0 No -25 0.63 No 35 73.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 70176373 + NM_017990 PDPR 1 10.33 4.85 70 4.61 74 64 6.89 Yes 51 1.25 Yes 25 0.78 Yes -25 0.85 Yes 45 71.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70177819 + NM_017990 PDPR 1 0.69 0.14 9 4.19 0 36 6.85 Yes 46 -0.41 No 0 0 No -38 0.54 No 39 53.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 30533825 - NM_030815 PDRG1 1 0.13 0.15 10 8.09 79.35 24 6.04 Yes 11 1.32 Yes 0 0 No -23 0.82 Yes 47 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30534080 - NM_030815 PDRG1 1 0.07 0.1 7 9.06 0 17 4.58 No 4 0.08 No 0 0 No -16 0.43 No 54 85.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 30536683 - NM_030815 PDRG1 1 1.58 2.18 64 1.64 76.4 29 4.22 No 8 0.41 No 0 0 No -28 0.77 Yes 42 64.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 39828468 - NM_001100399 PDS5A 1 0.43 0.81 40 14.2 90.58 37 6.24 Yes 74 0.77 No 0 0 No -19 0.44 No 51 61.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39839195 - NM_001100399 PDS5A 1 0.55 1.15 48 5.71 81.21 27 5.48 No 58 0.66 No 0 0 No -26 0.94 Yes 44 94.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 39848531 - NM_001100399 PDS5A 1 0.24 0.44 26 8.15 73.77 14 5.45 No 1 0.91 Yes 0 0 No -25 0.77 Yes 45 93.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39850524 - NM_001100399 PDS5A 1 0.23 0.47 23 4.56 82.25 22 5.1 No 36 0.52 No 0 0 No -21 0.61 No 49 36.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39863921 - NM_001100399 PDS5A 1 0.05 0.11 7 3.52 63.21 41 5.01 No 36 1.1 Yes 0 0 No -35 0.44 No 35 65.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39865051 - NM_001100399 PDS5A 1 1.1 1.86 58 3.75 66.82 22 5 No 9 0.91 Yes 0 0 No -21 0.37 No 37 59.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39868612 - NM_001100399 PDS5A 1 0.18 0.49 30 -0.85 0 11 3.87 No 5 0.73 No 0 0 No -26 0.34 No 47 36.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39868636 - NM_001100399 PDS5A 1 0.16 0.44 25 7.29 85.07 20 4.92 No 40 0.64 No 20 0.59 Yes -19 0.51 No 51 66.11 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 39891930 - NM_001100399 PDS5A 1 0.04 0.13 8 6.25 76.27 25 4.97 No 63 0.86 Yes 0 0 No -24 0.83 Yes 46 81.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39891983 - NM_001100399 PDS5A 1 0.03 0.11 8 -9.9 81.66 35 5.92 Yes 10 0.88 Yes 0 0 No -22 0.36 No 36 76.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 39898379 - NM_001100399 PDS5A 1 0.04 0.13 7 10.95 98.16 28 6.35 Yes 15 0.55 No 0 0 No -27 0.56 No 43 55.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39900442 - NM_001100399 PDS5A 1 0.04 0.14 8 -0.05 0 40 6.56 Yes 36 0.88 Yes 0 0 No -36 0.67 Yes 34 72.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39900476 - NM_001100399 PDS5A 1 0.05 0.18 11 1.31 54.46 15 4.64 No 74 0.66 No 35 0.53 Yes -48 0.48 No 56 67.42 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 39904108 - NM_001100399 PDS5A 1 0.09 0.29 14 4.13 76.38 15 7.55 Yes 2 0.72 No 29 0.82 Yes -26 0.84 Yes 44 74.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 39911977 - NM_001100399 PDS5A 1 0.24 0.65 35 3.83 65.71 40 5.88 Yes 68 1.21 Yes 26 0.64 Yes -28 0.53 No 42 81.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr4 39923731 - NM_001100399 PDS5A 1 0.03 0.11 7 9.35 88.88 54 5.52 No 26 0.36 No 0 0 No -38 0.59 No 32 85.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 39926144 - NM_001100399 PDS5A 1 0.04 0.11 8 9.95 84.65 34 5.35 No 18 0.05 No 0 0 No -33 0.69 Yes 48 59.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 39927485 - NM_001100399 PDS5A 1 0.36 0.78 33 3.26 80.7 15 5.29 No 32 0.6 No 0 0 No -18 0.67 Yes 52 78.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 39927547 - NM_001100399 PDS5A 1 0.05 0.11 7 -1.71 0 15 3.96 No 60 0.88 Yes 0 0 No -31 0.48 No 39 53.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39928459 - NM_001100399 PDS5A 1 0.13 0.19 10 7.26 88.22 28 5.66 Yes 32 1.1 Yes 0 0 No -27 0.9 Yes 43 88.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39933250 - NM_001100399 PDS5A 1 2.92 7.24 72 6.12 78.09 44 5.13 No 31 0.38 No 0 0 No -28 0.92 Yes 42 95.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 39935054 - NM_001100399 PDS5A 1 0.09 0.21 14 8.84 87.44 22 7.18 Yes 9 1.24 Yes 0 0 No -29 0.51 No 48 72.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 39949828 - NM_001100399 PDS5A 1 1.23 3.15 67 3.97 84.41 64 10.56 Yes 62 0.45 No 0 0 No -50 0.46 No 20 48.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39978199 - NM_001100399 PDS5A 1 0.13 0.15 8 2.29 0 21 4.4 No 50 1.59 Yes 0 0 No -20 0.51 No 50 66.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 33203429 + NM_015032 PDS5B 1 1.28 1.38 47 13.45 92 21 7.07 Yes 8 1.68 Yes 0 0 No -20 0.71 Yes 50 71.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 33203824 + NM_015032 PDS5B 1 0.24 0.26 15 8.46 91.96 57 8.29 Yes 44 1 Yes 0 0 No -24 0.88 Yes 46 86.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 33208201 + NM_015032 PDS5B 1 0.15 0.18 10 9.58 85.21 65 11.65 Yes 52 1.31 Yes 0 0 No -24 0.81 Yes 46 63.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 33222876 + NM_015032 PDS5B 1 0.22 0.24 15 4.06 74.33 39 5.56 Yes 43 0.3 No 18 0.83 Yes -29 0.78 Yes 41 71.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr13 33242335 + NM_015032 PDS5B 1 0.34 0.32 18 2.14 84.16 22 3.71 No 45 -2.26 No 0 0 No -21 0.52 No 49 53.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 33247475 + NM_015032 PDS5B 1 0.13 0.11 8 7.19 86.54 33 5.86 Yes 20 0.84 Yes 0 0 No -32 0.64 No 44 68.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 33248746 + NM_015032 PDS5B 1 1.07 2.06 58 7 83.47 26 3.79 No 2 0 No 0 0 No -26 0.6 No 44 60.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 33249593 + NM_015032 PDS5B 1 0.06 0.11 8 9.41 89.37 26 5.1 No 13 0.66 No 0 0 No -25 0.96 Yes 45 98.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 33258080 + NM_015032 PDS5B 1 0.18 0.25 16 4.52 72.21 19 5.65 Yes 6 0.31 No 0 0 No -23 0.58 No 45 53.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 33330003 + NM_015032 PDS5B 1 0.09 0.14 7 7.51 87.54 18 5.66 Yes 14 -0.64 No 0 0 No -26 0.64 No 44 72.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 33344788 + NM_015032 PDS5B 1 13.23 15.17 72 3.76 72.79 78 7.84 Yes 59 1.13 Yes 28 0.57 Yes -30 0.45 No 45 65.03 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 33345750 + NM_015032 PDS5B 1 0.54 0.68 34 10.33 88.75 37 5.83 Yes 28 0.53 No 0 0 No -31 0.9 Yes 39 94.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 33347595 + NM_015032 PDS5B 1 0.33 0.39 25 6.76 91.71 23 5.19 No 74 -2.35 No 0 0 No -22 0.9 Yes 48 88.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 27009063 + NM_014317 PDSS1 1 0.37 0.29 17 6.83 81.47 17 5.48 No 4 1.01 Yes 0 0 No -25 0.91 Yes 45 90.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27009063 + NM_014317 PDSS1 1 4.66 3.63 65 6.83 81.47 17 5.48 No 4 1.01 Yes 0 0 No -25 0.91 Yes 45 90.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27029522 + NM_014317 PDSS1 1 0.98 0.82 37 11.96 92.09 71 9.57 Yes 75 1.6 Yes 0 0 No -25 0.77 Yes 45 75.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27029573 + NM_014317 PDSS1 1 2.78 2.42 59 9.08 94.5 27 5.03 No 35 -1.75 No 26 0.83 Yes -24 0.6 No 46 78.02 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 27031692 + NM_014317 PDSS1 1 1.84 1.42 49 9.24 84.24 27 6.57 Yes 14 1.5 Yes 0 0 No -35 0.63 No 35 74.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 27031759 + NM_014317 PDSS1 1 0.23 0.15 10 7.91 78.83 15 5.08 No 2 0.83 Yes 0 0 No -24 0.31 No 56 41.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 107496252 - NM_020381 PDSS2 1 1.31 0.44 23 3.6 85.02 17 6.08 Yes 4 1.2 Yes 0 0 No -30 0.39 No 54 68.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 107500058 - NM_020381 PDSS2 1 0.78 0.22 13 7.59 83.92 44 7.71 Yes 31 1.78 Yes 0 0 No -38 0.79 Yes 32 90.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 107511094 - NM_020381 PDSS2 1 4.21 1.26 45 7.98 83.07 61 8.7 Yes 48 0.79 Yes 0 0 No -37 0.79 Yes 33 69.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 107511287 - NM_020381 PDSS2 1 0.4 0.13 7 10.64 88.27 31 6.47 Yes 24 1.43 Yes 0 0 No -30 0.95 Yes 40 96.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 107519103 - NM_020381 PDSS2 1 0.95 0.31 16 7.45 84.97 28 5.64 Yes 29 0.27 No 27 0.74 Yes -27 0.79 Yes 43 92.3 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 107546269 - NM_020381 PDSS2 1 0.87 0.26 17 4.97 78.88 57 7.85 Yes 44 0.59 No 0 0 No -24 0.94 Yes 46 95.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 107557665 - NM_020381 PDSS2 1 1.06 0.35 20 3.01 0 31 6.19 Yes 47 1.31 Yes 0 0 No -31 0.5 No 40 45.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 107559099 - NM_020381 PDSS2 1 0.54 0.19 12 11.78 95.65 33 7.81 Yes 42 1.71 Yes 0 0 No -32 0.89 Yes 38 92.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 107585717 - NM_020381 PDSS2 1 27.27 6.5 71 9.03 85.86 24 5.01 No 11 0.56 No 26 0.78 Yes -26 0.91 Yes 44 89.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 107645879 - NM_020381 PDSS2 1 1.66 0.5 27 8 83.96 33 4.28 No 73 -5 No 0 0 No -22 0.4 No 44 61.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 107686019 - NM_020381 PDSS2 1 1.25 0.29 17 10.69 93.07 31 4.52 No 44 0.67 No 0 0 No -22 0.59 No 48 64.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 107761645 - NM_020381 PDSS2 1 0.54 0.13 7 8.17 80.72 29 5.9 Yes 45 0.33 No 0 0 No -28 0.75 Yes 42 83.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 15069684 + NM_001324021 PDXDC1 1 0.23 0.38 17 7.36 83.4 37 8.94 Yes 24 1.63 Yes 0 0 No -36 0.85 Yes 34 78.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15070038 + NM_001324021 PDXDC1 1 0.6 0.94 41 7.27 69.13 22 8.18 Yes 9 1.53 Yes 0 0 No -21 0.78 Yes 49 90.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15070056 + NM_001324021 PDXDC1 1 1.39 2.21 61 9.87 87.74 23 5.19 No 27 1.54 Yes 0 0 No -22 0.9 Yes 48 91.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15071157 + NM_001324021 PDXDC1 1 0.97 1.51 52 -1.01 84.41 34 7.42 Yes 21 1.46 Yes 0 0 No -33 0.96 Yes 37 97.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15071159 + NM_001324021 PDXDC1 1 0.64 1.03 41 -4.03 87.48 36 7.55 Yes 23 1.45 Yes 0 0 No -35 0.96 Yes 35 97.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15078375 + NM_001324021 PDXDC1 1 0.34 0.56 28 1.99 83.13 44 8.49 Yes 71 -1.27 No 28 0.31 Yes -34 0.33 No 36 40.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 15078399 + NM_001324021 PDXDC1 1 0.33 0.54 24 3.72 80.97 27 5.2 No 2 1.79 Yes 0 0 No -26 0.48 No 14 36.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 15091613 + NM_001324021 PDXDC1 1 0.56 0.93 43 2.1 0 36 6.63 Yes 23 0.75 No 31 0.44 Yes -35 0.57 No 35 72.42 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 15092199 + NM_001324021 PDXDC1 1 4.08 6.47 72 0.34 69.64 31 5.83 Yes 18 0.31 No 27 0.65 Yes -27 0.72 Yes 43 70.17 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15095514 + NM_001324021 PDXDC1 1 0.5 0.11 7 9.42 83.81 30 6.48 Yes 40 0.27 No 0 0 No -23 0.79 Yes 47 90.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 15095632 + NM_001324021 PDXDC1 1 1103.6 189.17 72 7.48 92.12 20 4.15 No 15 0.27 No 22 0.56 Yes -22 0.51 No 48 65.96 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 15103355 + NM_001324021 PDXDC1 1 0.09 0.18 10 5.44 75.63 15 4.95 No 2 1.23 Yes 0 0 No -31 0.44 No 39 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 15110949 + NM_001324021 PDXDC1 1 0.09 0.11 8 -2.26 58.7 20 4.37 No 23 -3.5 No 20 0.38 Yes -19 0.55 No 51 45.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 15118611 + NM_001324021 PDXDC1 1 0.08 0.24 14 11.64 93.11 21 6.28 Yes 8 1.24 Yes 0 0 No -23 0.89 Yes 47 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15122856 + NM_001324021 PDXDC1 1 0.35 0.65 31 13.68 94.06 19 5.39 No 6 1.3 Yes 0 0 No -18 0.76 Yes 48 73.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70016449 - NR_003610 PDXDC2P 1 1.59 0.1 7 8.12 86.67 29 6.57 Yes 16 2.03 Yes 28 0.95 Yes -28 0.96 Yes 42 97.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70069672 - NR_003610 PDXDC2P 1 5.4 0.38 21 8.21 80.73 35 5.89 Yes 22 0.64 No 20 0.8 Yes -20 0.84 Yes 50 82.8 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 70076317 - NR_003610 PDXDC2P 1 1.71 0.18 10 0.34 69.64 31 5.83 Yes 18 0.31 No 0 0 No -27 0.72 Yes 43 69.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 70097592 - NR_003610 PDXDC2P 1 1.37 0.13 9 -1.37 84.41 21 6.48 Yes 8 1.07 Yes 20 0.87 Yes -20 0.89 Yes 50 95.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45143377 + NM_003681 PDXK 1 0.15 0.21 15 2.25 0 20 4.57 No 50 -1.81 No 20 0.54 Yes -20 0.53 No 51 42.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 45152019 + NM_003681 PDXK 1 1.57 1.92 61 7.43 92.61 24 5 No 11 1.54 Yes 23 0.96 Yes -23 0.88 Yes 47 94.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45156834 + NM_003681 PDXK 1 0.44 0.75 35 12.59 87.72 31 5.23 No 25 0.73 No 24 0.39 Yes -24 0.69 Yes 46 78.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45157984 + NM_003681 PDXK 1 0.22 0.35 20 5.81 87.67 32 8.38 Yes 15 0.74 No 0 0 No -31 0.51 No 43 59.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45163549 + NM_003681 PDXK 1 0.19 0.38 22 8.81 86.28 29 5.86 Yes NA NA NA 36 0.14 Yes -36 0.34 No 34 78.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr21 45163819 + NM_003681 PDXK 1 0.11 0.26 14 5.63 74.64 50 7.48 Yes 37 0.47 No 0 0 No -49 0.77 Yes 21 80.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 45166996 + NM_003681 PDXK 1 0.31 0.89 40 8.52 81.73 29 5.63 Yes -3 0.83 Yes 28 0.81 Yes -28 0.59 No 49 63.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 45175836 + NM_003681 PDXK 1 0.09 0.28 19 0.87 0 29 5.92 Yes 70 2.26 Yes 0 0 No -28 0.94 Yes 42 92.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 69506619 - NM_016484 PDZD11 1 0.1 0.15 11 5.86 82.5 25 6.13 Yes 43 1.45 Yes 0 0 No -24 0.9 Yes 46 95.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 69509444 - NM_016484 PDZD11 1 11.7 14.04 72 7.25 92.88 16 5.47 No 3 1.6 Yes 23 0.91 Yes -23 0.85 Yes 49 65.61 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 69509472 - NM_016484 PDZD11 1 0.5 0.64 30 10 94.16 17 6 Yes 4 1.49 Yes 23 0.91 Yes -22 0.45 No 47 48.37 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 119045311 - NM_173791 PDZD8 1 1.26 0.67 27 9.32 85.04 30 5.68 Yes -2 0.99 Yes 30 0.56 Yes -30 0.51 No 40 45.12 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 119073825 - NM_173791 PDZD8 1 0.88 0.63 28 10.3 86.87 25 4.21 No 59 0.5 No 0 0 No -24 0.87 Yes 46 82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 119131448 - NM_173791 PDZD8 1 0.13 0.14 8 1.89 0 36 6.77 Yes 23 1 Yes 0 0 No -39 0.73 Yes 31 87.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160182975 + NM_001297576 PEA15 1 0.02 0.13 7 3.22 77.04 29 6.91 Yes 16 2.05 Yes 0 0 No -20 0.64 No 42 70.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 77450991 - NM_024776 PEAK1 1 1.05 0.24 14 1.02 62.93 30 5.66 Yes 47 1.04 Yes 0 0 No -29 0.84 Yes 41 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 77576373 - NM_024776 PEAK1 1 71.03 6.54 72 7.11 83.8 31 3.89 No 18 0.38 No 30 0.9 Yes -30 0.63 No 40 69.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 77577398 - NM_024776 PEAK1 1 17.29 1.54 53 2.86 84 15 4.61 No 36 1.59 Yes 25 0.9 Yes -48 0.37 No 26 83.39 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 118577257 + NM_002567 PEBP1 1 0.02 0.14 7 -1.84 76.13 26 7.87 Yes 13 1.91 Yes 0 0 No -25 0.73 Yes 45 94.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 216925514 - NM_018441 PECR 1 1.15 0.75 33 9.45 74.16 35 7.14 Yes 22 2.43 Yes 0 0 No -34 0.82 Yes 36 93.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 216928870 - NM_018441 PECR 1 0.94 0.61 31 9.27 88.82 42 5.79 Yes 15 1.71 Yes 27 0.89 Yes -27 0.68 Yes 43 65.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 32096316 - NR_033686 PEF1 1 0.26 0.58 32 0.28 0 9 3.87 No 20 1.51 Yes 0 0 No -24 0.9 Yes 62 36.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 32096322 - NR_033686 PEF1 1 0.47 1.06 40 0.82 0 19 4.58 No 14 1.53 Yes 0 0 No -18 0.94 Yes 52 23.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 32096334 - NR_033686 PEF1 1 1.07 2.43 62 5.07 83.82 15 5.2 No 2 1.53 Yes 24 0.63 Yes -20 0.51 No 50 48.19 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 32096352 - NR_033686 PEF1 1 0.78 1.81 59 5.95 78.9 55 7.55 Yes 54 1.28 Yes 24 0.63 Yes -28 0.44 No 16 50.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 32096482 - NR_033686 PEF1 1 0.06 0.14 10 2.08 78.19 20 4.69 No 35 -2.49 No 24 0.04 Yes -19 0.76 Yes 47 68.69 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 32098169 - NR_033686 PEF1 1 0.05 0.11 7 2.37 67.72 23 5.39 No 61 -2.49 No 0 0 No -22 0.92 Yes 48 88.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 32098281 - NR_033686 PEF1 1 0.06 0.15 10 1.22 82.96 22 5.29 No 9 0.34 No 36 0.54 Yes -21 0.86 Yes 49 83.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 64323445 - NM_020651 PELI1 1 0.17 0.26 16 -11.11 74.27 24 5.92 Yes 11 1.35 Yes 0 0 No -23 0.97 Yes 47 91.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64324412 - NM_020651 PELI1 1 0.59 1.19 46 3.75 73.06 34 5.94 Yes 21 0.69 No 0 0 No -33 0.83 Yes 37 68.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 64331732 - NM_020651 PELI1 1 1.7 3.17 63 10.07 90.59 16 5.83 Yes 3 0.93 Yes 27 0.77 Yes -27 0.65 No 43 76.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 64331757 - NM_020651 PELI1 1 0.2 0.39 20 8.31 83.26 33 5.7 Yes 34 0.08 No 27 0.77 Yes -32 0.43 No 48 57.64 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 64333434 - NM_020651 PELI1 1 0.64 0.93 39 8.3 77.72 23 5.06 No 52 1.06 Yes 27 0.5 Yes -34 0.5 No 43 54.33 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 64370661 - NM_020651 PELI1 1 0.71 0.92 37 8.2 72.49 27 6.71 Yes 14 1.11 Yes 26 0.88 Yes -26 0.7 Yes 44 79.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4574821 - NM_014389 PELP1 1 0.12 0.15 8 -6.51 0 11 3.87 No 55 1.28 Yes 0 0 No -40 0.41 No 30 69.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 4576707 - NM_014389 PELP1 1 0.26 0.24 14 1.11 74.18 36 7.21 Yes 23 1.36 Yes 0 0 No -38 0.65 No 32 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 4576710 - NM_014389 PELP1 1 1.95 2 60 1.96 73.68 33 7 Yes 20 1.37 Yes 0 0 No -35 0.74 Yes 35 89.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4579381 - NM_014389 PELP1 1 0.81 0.96 41 6.52 86.44 21 5.89 Yes 8 1.54 Yes 0 0 No -20 0.7 Yes 50 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4580112 - NM_014389 PELP1 1 0.05 0.11 7 3.38 0 29 6.63 Yes 16 1.85 Yes 32 0.91 Yes -28 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 4586375 - NM_014389 PELP1 1 0.64 0.86 39 10.14 94.48 40 6.14 Yes 27 0.38 No 31 0.37 Yes -39 0.31 No 31 40.31 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 17410517 - NM_148173 PEMT 1 0.51 0.15 9 8.38 81.84 62 8 Yes NA NA NA 27 0.41 Yes -35 0.42 No 13 54.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 17422548 - NM_148173 PEMT 1 2.4 0.61 31 12.02 95.26 31 7.42 Yes 18 1.89 Yes 0 0 No -30 0.97 Yes 40 97.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 17448552 - NM_148173 PEMT 1 2.51 0.74 32 11.54 93.74 31 6 Yes 55 -2.2 No 0 0 No -30 0.95 Yes 40 89.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17474232 - NM_148173 PEMT 1 1.31 0.36 19 9.58 84.73 29 6.57 Yes NA NA NA 0 0 No -29 0.48 No 42 46.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 33878651 - NM_000285 PEPD 1 0.27 0.14 8 8.8 82.52 30 6 Yes 40 1.13 Yes 25 0.89 Yes -29 0.9 Yes 41 94.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 33881223 - NM_000285 PEPD 1 0.34 0.18 12 5.92 85.49 27 6.34 Yes 14 1.7 Yes 0 0 No -26 0.46 No 44 67.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 33902707 - NM_000285 PEPD 1 0.19 0.22 13 7.21 81.67 15 4.67 No 24 0.43 No 0 0 No -21 0.8 Yes 49 73.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 33933886 - NM_000285 PEPD 1 0.2 0.25 16 6.35 76.65 21 5.77 Yes 8 0.65 No 0 0 No -23 0.92 Yes 47 90.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 8053441 - NM_002616 PER1 1 0.61 0.15 10 -0.47 64.8 40 8.06 Yes 27 1.97 Yes 0 0 No -39 0.82 Yes 31 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 239157846 - NM_022817 PER2 1 0.57 0.18 10 -6.56 0 12 4.12 No 67 -5.86 No 0 0 No -33 0.9 Yes 37 88.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 239159381 - NM_022817 PER2 1 0.34 0.11 8 -0.25 0 31 8.06 Yes 18 1.04 Yes 0 0 No -30 0.92 Yes 40 92.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 239167063 - NM_022817 PER2 1 0.71 0.22 13 5.05 75.01 40 7.81 Yes 27 1.3 Yes 26 0.96 Yes -39 0.92 Yes 31 97.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 239167265 - NM_022817 PER2 1 0.52 0.15 10 4.27 73.3 10 4.18 No -3 1.32 Yes 0 0 No -23 0.82 Yes 47 84.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 239185830 - NM_022817 PER2 1 0.53 0.19 13 2.63 0 35 7.54 Yes 22 1.19 Yes 0 0 No -34 0.82 Yes 36 84.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 30974983 - NM_001282327 PES1 1 2.79 8.43 72 1.98 69.98 26 5.64 Yes 13 0.5 No 25 0.67 Yes -25 0.47 No 45 59.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 30976674 - NM_001282327 PES1 1 3.59 8.88 71 -7.46 0 21 4.49 No 8 -0.77 No 23 0.65 Yes -20 0.84 Yes 50 51.64 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 30976686 - NM_001282327 PES1 1 0.28 0.61 33 -8.42 71.16 27 5.74 Yes 62 -0.55 No 23 0.65 Yes -26 0.69 Yes 44 54.8 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr22 30981358 - NM_001282327 PES1 1 0.17 0.53 24 11.34 88.49 25 7.65 Yes 12 1.77 Yes 24 0.85 Yes -24 0.84 Yes 46 86.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 30984180 - NM_001282327 PES1 1 0.04 0.11 7 1.28 67.28 29 5.55 No -3 0.63 No 22 0.83 Yes -22 0.52 No 48 62.94 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 7695509 + NR_033242 PET100 1 0.1 0.42 24 7.84 79.61 46 5.5 No 65 1.67 Yes 0 0 No -45 0.38 No 34 69.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 7695639 + NR_033242 PET100 1 0.15 0.58 26 1.03 69.41 19 6.4 Yes 6 1.69 Yes 0 0 No -18 0.7 Yes 52 74.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7695710 + NR_033242 PET100 1 0.08 0.32 19 -10.36 82.6 17 7.07 Yes 4 1.17 Yes 0 0 No -23 0.8 Yes 47 86.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 18122853 + NM_001164811 PET117 1 0.18 0.1 7 2.04 83.12 26 7.94 Yes 73 1.44 Yes 0 0 No -25 0.61 No 45 56.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 92144869 - NM_001282678 PEX1 1 1.25 0.42 22 -4.51 0 51 7.31 Yes 63 0.25 No 0 0 No -45 0.38 No 25 57.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 145518411 + NR_073493 PEX11B 1 0.13 0.14 9 5.53 70.89 29 4.53 No 9 0.6 No 0 0 No -28 0.79 Yes 42 75.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 145519409 + NR_073493 PEX11B 1 0.25 0.31 20 3.69 82.73 28 5.38 No 58 -3.87 No 0 0 No -27 0.52 No 43 52.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 145522600 + NR_073493 PEX11B 1 0.24 0.33 17 2.63 82.54 19 4.8 No 14 0.89 Yes 0 0 No -26 0.81 Yes 44 73.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33904267 - NM_000286 PEX12 1 0.61 0.14 7 3.31 73.1 35 5.4 No 22 0.78 Yes 0 0 No -34 0.67 Yes 36 57.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 61245296 + NM_002618 PEX13 1 1.6 0.49 25 7.87 87.78 26 6.63 Yes 39 -0.39 No 25 0.84 Yes -29 0.54 No 45 68.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 61245318 + NM_002618 PEX13 1 6.67 2.11 62 8.16 77.86 27 5.57 Yes 14 0.6 No 26 0.93 Yes -26 0.82 Yes 44 88.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 61245323 + NM_002618 PEX13 1 1.3 0.36 22 2.31 0 32 6 Yes 19 0.59 No 26 0.93 Yes -31 0.75 Yes 39 82.8 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 61245485 + NM_002618 PEX13 1 1.39 0.46 25 8.92 87.57 31 6 Yes 18 0.22 No 0 0 No -30 0.87 Yes 40 90.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61248184 + NM_002618 PEX13 1 4.19 1.33 47 6.55 82.94 28 5.83 Yes 71 0.6 No 0 0 No -27 0.77 Yes 43 71.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 10567217 + NM_004565 PEX14 1 0.59 0.31 19 4.53 86.45 14 3.69 No 1 0.66 No 0 0 No -19 0.58 No 51 60.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 10577084 + NM_004565 PEX14 1 0.44 0.21 12 11.22 92.15 36 5.97 Yes 23 0.47 No 29 0.58 Yes -27 0.66 No 43 60.15 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 10579859 + NM_004565 PEX14 1 14.14 6.83 71 7.76 86.86 38 6.88 Yes 25 0.71 No 0 0 No -24 0.39 No 33 45.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 10584462 + NM_004565 PEX14 1 0.67 0.33 18 8.27 88.43 29 5.26 No 6 0.62 No 0 0 No -26 0.52 No 42 60.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 10588307 + NM_004565 PEX14 1 0.5 0.28 17 8.32 78.57 40 7.99 Yes 27 1.31 Yes 0 0 No -39 0.48 No 31 69.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 10601108 + NM_004565 PEX14 1 3.21 1.64 54 8.21 83.22 26 6.44 Yes 7 1.27 Yes 0 0 No -29 0.7 Yes 41 70.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 10607148 + NM_004565 PEX14 1 0.35 0.17 11 7.4 82.27 19 4.9 No 6 0.03 No 0 0 No -18 0.78 Yes 52 89.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 10626590 + NM_004565 PEX14 1 0.24 0.13 8 6.56 90.92 47 9.19 Yes 34 1.14 Yes 0 0 No -27 0.88 Yes 43 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 10636834 + NM_004565 PEX14 1 6.15 3.17 67 11.86 88.27 29 7.2 Yes 52 1.21 Yes 0 0 No -28 0.85 Yes 42 90.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 10689590 + NM_004565 PEX14 1 0.29 0.17 11 -5.95 78.14 30 5.86 Yes 30 1.34 Yes 0 0 No -29 0.75 Yes 41 84.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 45936291 - NM_057174 PEX16 1 0.1 0.11 7 7.97 91.53 21 5.37 No 38 1.08 Yes 0 0 No -20 0.9 Yes 50 81.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 45938693 - NM_057174 PEX16 1 0.92 0.79 39 7.49 76.86 24 3.91 No 68 1.43 Yes 23 0.95 Yes -23 0.81 Yes 47 87.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160247982 - NR_036492 PEX19 1 0.32 0.25 15 5.24 82.5 18 6.09 Yes 5 0.99 Yes 0 0 No -33 0.34 No 37 58.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160248736 - NR_036492 PEX19 1 0.16 0.13 8 9.86 85.82 20 5.1 No 58 0.31 No 0 0 No -19 0.78 Yes 51 86.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160249373 - NR_036492 PEX19 1 3.3 2.64 62 6.43 80.03 34 7.55 Yes 62 1.31 Yes 0 0 No -33 0.84 Yes 37 75.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160251086 - NR_036492 PEX19 1 0.86 1.29 48 2.52 0 35 6.65 Yes 51 -3.69 No 34 0.44 Yes -34 0.92 Yes 36 91.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160251090 - NR_036492 PEX19 1 0.09 0.15 8 -0.68 81.52 31 6.35 Yes 47 -3.68 No 34 0.44 Yes -30 0.93 Yes 40 90.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 160253430 - NR_036492 PEX19 1 1254.8 127.53 72 10.33 85.65 31 8.09 Yes 69 1.74 Yes 31 0.43 Yes -30 0.45 No 40 66.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 77896430 - NM_001172087 PEX2 1 15.7 0.53 24 -3.12 82.73 30 7.41 Yes 17 1.83 Yes 0 0 No -29 0.85 Yes 41 94.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 77898533 - NM_001172087 PEX2 1 1276.33 43.35 72 7.97 85.96 25 6.72 Yes 12 0.61 No 27 0.43 Yes -24 0.78 Yes 46 75.74 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 77900575 - NM_001172087 PEX2 1 5436.46 182.03 72 7.15 88.43 34 5.26 No 21 1.27 Yes 29 0.81 Yes -29 0.63 No 41 66.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 77903903 - NM_001172087 PEX2 1 12.02 0.36 16 9.44 77.48 33 6.47 Yes 14 0.46 No 0 0 No -32 0.63 No 38 62.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 18561455 + NM_001127649 PEX26 1 0.13 0.1 7 6.47 87.71 21 4.9 No 8 0.16 No 0 0 No -20 0.95 Yes 50 94.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 18561944 + NM_001127649 PEX26 1 1.24 0.86 39 2.41 69.36 26 5.22 No 18 0.7 No 0 0 No -28 0.37 No 40 67.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 18561947 + NM_001127649 PEX26 1 0.57 0.4 21 -4.34 52.22 29 5.49 No 21 0.69 No 0 0 No -31 0.36 No 37 57.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 18569723 + NM_001127649 PEX26 1 0.19 0.25 17 4.99 90.11 27 6.16 Yes 68 0.74 No 0 0 No -26 0.79 Yes 44 64.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 18570719 + NM_001127649 PEX26 1 0.22 0.25 16 1.52 68.4 25 5.39 No 59 -3.97 No 25 0.91 Yes -31 0.59 No 39 47.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 18570823 + NM_001127649 PEX26 1 0.07 0.1 7 7.04 80.41 21 5.58 Yes NA NA NA 0 0 No -27 0.71 Yes 51 76.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 18569691 + NM_001127649 PEX26 1 0.09 0.11 7 7.06 84.46 37 4.08 No 46 0.76 No 0 0 No -36 0.41 No 38 63.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 18569723 + NM_001127649 PEX26 1 0.64 0.79 41 4.99 90.11 27 6.16 Yes 68 0.74 No 0 0 No -26 0.79 Yes 44 64.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 18570719 + NM_001127649 PEX26 1 0.13 0.17 11 1.52 68.4 25 5.39 No 59 -3.97 No 25 0.91 Yes -31 0.59 No 39 47.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 18570823 + NM_001127649 PEX26 1 0.33 0.44 24 7.04 80.41 21 5.58 Yes NA NA NA 0 0 No -27 0.71 Yes 51 76.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 143800217 + NM_003630 PEX3 1 0.16 0.14 9 0.56 0 30 6.12 Yes 17 1.24 Yes 0 0 No -29 0.54 No 41 59.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 7344561 + NM_000319 PEX5 1 0.17 0.1 7 4.57 67.4 42 4.3 No 3 -2.25 No 0 0 No -15 0.39 No 50 55.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 7345369 + NM_000319 PEX5 1 0.62 0.31 17 10.36 89.99 29 7.58 Yes 70 0.86 Yes 0 0 No -28 0.67 Yes 42 73.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7354330 + NM_000319 PEX5 1 0.48 0.25 14 0.31 56.25 15 4.7 No 66 0.96 Yes 25 0.88 Yes -14 0.53 No 56 38.59 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 7354330 + NM_000319 PEX5 1 0.29 0.13 9 0.31 56.25 15 4.7 No 66 0.96 Yes 25 0.88 Yes -14 0.53 No 56 38.59 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 7354857 + NM_000319 PEX5 1 1.48 0.33 17 4.86 73.82 16 5.46 No 66 -0.87 No 0 0 No -23 0.4 No 47 46.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 7360263 + NM_000319 PEX5 1 0.57 0.25 11 -4.79 0 17 4.24 No 41 1.81 Yes 0 0 No -38 0.78 Yes 32 81.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42936510 - NM_001316313 PEX6 1 0.17 0.1 7 11.19 90.68 54 8.06 Yes 41 1.86 Yes 0 0 No -53 0.88 Yes 17 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42940719 - NM_001316313 PEX6 1 0.21 0.15 7 0.27 75.53 38 4.14 No 57 0.61 No 0 0 No -29 0.28 No 41 38.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42940722 - NM_001316313 PEX6 1 0.89 0.56 34 4.53 84.22 35 3.98 No 54 0.62 No 0 0 No -26 0.3 No 44 39.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42941844 - NM_001316313 PEX6 1 3.08 1.78 56 6.18 76.99 40 7.68 Yes 13 0.76 No 24 0.98 Yes -25 0.93 Yes 45 93.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 137147451 + NM_000288 PEX7 1 7.2 1.01 42 8.74 83.38 36 6.48 Yes 58 0.93 Yes 40 0.55 Yes -35 0.64 No 35 61.66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 137151144 + NM_000288 PEX7 1 10.32 1.01 42 8.61 90.73 37 6.05 Yes 24 0.24 No 27 0.39 Yes -26 0.62 No 44 47.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 137181384 + NM_000288 PEX7 1 0.76 0.13 7 6.16 77.07 30 5.38 No 66 -5.26 No 0 0 No -21 0.84 Yes 49 69.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 137224825 + NM_000288 PEX7 1 0.58 0.21 12 -0.73 0 24 6 Yes 47 0.7 No 0 0 No -30 0.45 No 40 57.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 8157159 + NM_012393 PFAS 1 0.65 0.69 35 -0.36 59.52 21 5.14 No 62 1.55 Yes 29 0.53 Yes -20 0.49 No 50 35.02 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 8157197 + NM_012393 PFAS 1 0.59 0.57 30 5.77 86.65 15 5.47 No 2 1.13 Yes 0 0 No -23 0.48 No 47 49.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 8158912 + NM_012393 PFAS 1 0.28 0.26 17 6.91 81.95 31 5.48 No 18 0.35 No 0 0 No -28 0.53 No 50 40.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 8159319 + NM_012393 PFAS 1 0.78 1.1 41 7.42 78.02 27 6.36 Yes 14 1.86 Yes 0 0 No -26 0.96 Yes 44 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8164573 + NM_012393 PFAS 1 0.26 0.24 15 9.91 88.27 42 6.08 Yes 23 1.29 Yes 0 0 No -35 0.87 Yes 35 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8169818 + NM_012393 PFAS 1 5.28 4.65 68 11.35 85.36 31 5.83 Yes 18 1.84 Yes 30 0.92 Yes -30 0.71 Yes 40 81.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8170699 + NM_012393 PFAS 1 0.41 0.61 31 -2.19 0 13 3.34 No 33 0.98 Yes 0 0 No -29 0.33 No 47 53.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 139625640 - NM_002622 PFDN1 1 0.61 1.4 54 4.77 78.05 30 7.75 Yes 17 2.24 Yes 0 0 No -29 0.79 Yes 41 89.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 139638532 - NM_002622 PFDN1 1 0.06 0.13 9 8.28 86.27 30 5.69 Yes 17 1.07 Yes 0 0 No -29 0.73 Yes 41 89.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 139653522 - NM_002622 PFDN1 1 0.15 0.35 19 12.14 100 19 8.97 Yes 6 0.71 No 0 0 No -29 0.51 No 41 69.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 161070644 - NM_012394 PFDN2 1 0.42 2.01 57 -1.25 0 9 3.87 No 29 0.83 Yes 0 0 No -33 0.68 Yes 37 71.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161080403 - NM_012394 PFDN2 1 0.3 0.72 32 2.12 72.12 36 7.41 Yes 23 1.49 Yes 0 0 No -35 0.45 No 35 62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 52830896 + NM_002623 PFDN4 1 0.06 0.11 8 -0.24 0 10 4 No 46 1.31 Yes 0 0 No -22 0.39 No 48 41.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 52835558 + NM_002623 PFDN4 1 0.03 0.17 8 -12.79 0 24 5.85 Yes 37 0.23 No 0 0 No -23 0.87 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 53690002 + NM_002624 PFDN5 1 0.3 1.75 59 5.82 86.75 12 4.94 No -1 1.59 Yes 27 0.56 Yes -26 0.8 Yes 44 83.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53690213 + NM_002624 PFDN5 1 0.2 1.92 57 4.36 83.04 41 6.37 Yes 28 0.58 No 34 0.57 Yes -34 0.66 No 36 70.26 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 53690237 + NM_002624 PFDN5 1 0.22 1.96 55 4.44 84.17 27 5.74 Yes 52 0.56 No 26 0.86 Yes -26 0.73 Yes 12 67.61 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 53691607 + NM_002624 PFDN5 1 0.01 0.11 7 0.93 57.75 24 5.59 Yes 4 0.08 No 28 0.31 Yes -16 0.49 No 54 58.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 53691832 + NM_002624 PFDN5 1 0.01 0.17 8 2.62 0 21 4.98 No 8 1.2 Yes 0 0 No -20 0.72 Yes 50 80.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53690002 + NM_002624 PFDN5 1 0.16 0.99 43 5.82 86.75 12 4.94 No -1 1.59 Yes 27 0.56 Yes -26 0.8 Yes 44 83.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53690213 + NM_002624 PFDN5 1 0.14 1.32 55 4.36 83.04 41 6.37 Yes 28 0.58 No 34 0.57 Yes -34 0.66 No 36 70.26 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 53690237 + NM_002624 PFDN5 1 0.09 0.82 36 4.44 84.17 27 5.74 Yes 52 0.56 No 26 0.86 Yes -26 0.73 Yes 12 67.61 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 53691607 + NM_002624 PFDN5 1 0.02 0.18 11 0.93 57.75 24 5.59 Yes 4 0.08 No 28 0.31 Yes -16 0.49 No 54 58.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 53691607 + NM_002624 PFDN5 1 0.01 0.13 8 0.93 57.75 24 5.59 Yes 4 0.08 No 28 0.31 Yes -16 0.49 No 54 58.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 53691802 + NM_002624 PFDN5 1 0.06 0.75 40 -1.6 0 20 4.47 No 35 -2.32 No 19 0.56 Yes -17 0.47 No 53 64.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 53691832 + NM_002624 PFDN5 1 0.19 2.53 63 2.62 0 21 4.98 No 8 1.2 Yes 0 0 No -20 0.72 Yes 50 80.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 207238308 + NM_006212 PFKFB2 1 1.32 0.11 7 9.31 85.04 26 6 Yes 53 -1.66 No 26 0.52 Yes -25 0.91 Yes 45 87.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 6270158 + NM_001323017 PFKFB3 1 0.57 0.14 9 10.64 84.91 28 6.56 Yes 19 2.28 Yes 27 0.94 Yes -27 0.72 Yes 43 77.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45727062 + NM_001002021 PFKL 1 0.04 0.11 8 8.58 84.91 27 6.48 Yes 14 1.81 Yes 0 0 No -26 0.97 Yes 44 96.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45727142 + NM_001002021 PFKL 1 1.15 3.36 65 12.06 92.3 16 6.56 Yes 3 0.5 No 0 0 No -36 0.48 No 43 56.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45727846 + NM_001002021 PFKL 1 0.09 0.24 15 2.4 83.54 11 4.8 No 69 -6.09 No 0 0 No -10 0.24 No 52 29.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45731726 + NM_001002021 PFKL 1 0.28 0.79 33 6.87 82.31 31 8.52 Yes 68 0.23 No 0 0 No -31 0.74 Yes 39 62.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 45731966 + NM_001002021 PFKL 1 0.21 0.57 27 5.51 74.24 41 6.4 Yes 28 0.63 No 24 0.86 Yes -22 0.58 No 30 62.61 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 45732865 + NM_001002021 PFKL 1 0.09 0.32 19 -3.08 0 36 6.16 Yes 23 0.8 Yes 0 0 No -35 0.87 Yes 35 78.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45733853 + NM_001002021 PFKL 1 0.07 0.21 13 2.25 80.41 21 4.25 No 71 0.47 No 0 0 No -20 0.6 No 50 64.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45734838 + NM_001002021 PFKL 1 0.17 0.39 22 8.28 72.56 28 7.21 Yes 15 1.61 Yes 0 0 No -27 0.93 Yes 43 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45735247 + NM_001002021 PFKL 1 0.09 0.17 9 4.82 79.85 57 6.37 Yes 44 1.33 Yes 0 0 No -32 0.75 Yes 38 76.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45739969 + NM_001002021 PFKL 1 0.27 0.88 41 -12.14 69.72 21 6.71 Yes 8 0.08 No 0 0 No -20 0.9 Yes 50 82.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 45744302 + NM_001002021 PFKL 1 0.16 0.68 31 0.91 0 16 4.58 No 27 -2.51 No 20 0.52 Yes -20 0.41 No 50 41.57 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 45744394 + NM_001002021 PFKL 1 0.04 0.18 12 2.42 64.73 15 5.29 No 2 0.61 No 0 0 No -14 0.43 No 56 76.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 45745016 + NM_001002021 PFKL 1 0.1 0.38 19 4.94 78.71 22 5.92 Yes 9 0.95 Yes 21 0.91 Yes -21 0.58 No 49 58.49 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 48512264 + NM_001166686 PFKM 1 18.43 1.61 48 6.41 82.34 27 6.07 Yes 14 0.43 No 26 0.75 Yes -26 0.88 Yes 44 84.12 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 48519107 + NM_001166686 PFKM 1 0.24 0.33 18 7.27 85.05 16 6.76 Yes 64 0.56 No 24 0.74 Yes -24 0.84 Yes 46 62.68 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 48528685 + NM_001166686 PFKM 1 0.16 0.19 11 5.69 79.81 24 7.12 Yes 25 1.97 Yes 27 0.57 Yes -23 0.69 Yes 47 79.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 48539016 + NM_001166686 PFKM 1 0.07 0.11 8 3.86 75.84 32 5.74 Yes 33 1.82 Yes 0 0 No -31 0.86 Yes 25 49.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 3141748 + NM_001323069 PFKP 1 0.22 0.31 15 2.02 72.29 22 4.65 No 65 0.24 No 0 0 No -21 0.88 Yes 49 93.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 3143540 + NM_001323069 PFKP 1 0.08 0.1 7 -14.98 0 17 4.24 No 49 -1.02 No 22 0.61 Yes -16 0.65 No 61 18.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 3143640 + NM_001323069 PFKP 1 0.08 0.1 7 4.72 72.58 25 5.48 No 60 -4.71 No 0 0 No -24 0.84 Yes 46 65.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 3151607 + NM_001323069 PFKP 1 0.03 0.11 8 -1.62 68.38 17 5.02 No 72 1.68 Yes 0 0 No -21 0.56 No 49 45.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 3155313 + NM_001323069 PFKP 1 0.06 0.11 7 -7.07 78.3 24 6.35 Yes 42 0.42 No 0 0 No -23 0.76 Yes 47 76.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 3163794 + NM_001323069 PFKP 1 1.48 3.63 44 12.99 95.65 26 7.19 Yes 13 1.63 Yes 0 0 No -25 0.63 No 45 65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 3164038 + NM_001323069 PFKP 1 0.36 0.72 29 3.01 0 63 8.58 Yes 50 1.47 Yes 0 0 No -59 0.43 No 11 36.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 3167288 + NM_001323069 PFKP 1 0.13 0.22 12 5.27 88.06 24 7.07 Yes 11 2.15 Yes 23 0.95 Yes -23 0.93 Yes 47 94.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 4849287 - NM_005022 PFN1 1 0.01 0.58 28 -0.12 0 9 3.87 No 36 1.31 Yes 0 0 No -35 0.81 Yes 35 88.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4849320 - NM_005022 PFN1 1 0.04 3.44 62 1.18 64 16 6.16 Yes 3 0.14 No 29 0.8 Yes -15 0.43 No 55 38.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 4849349 - NM_005022 PFN1 1 0 0.21 10 -6.18 0 13 4 No 0 0.19 No 0 0 No -11 0.88 Yes 58 46.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 4850008 - NM_005022 PFN1 1 0.03 2.04 63 6.15 84.15 22 6.48 Yes 9 0.75 No 0 0 No -21 0.72 Yes 49 72.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4850112 - NM_005022 PFN1 1 0.01 0.61 26 2.74 0 34 7.91 Yes 21 1.27 Yes 0 0 No -33 0.7 Yes 37 83.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 149684052 - NM_053024 PFN2 1 67.95 23.04 70 6.66 83.51 40 8.57 Yes 18 1.23 Yes 30 0.88 Yes -30 0.73 Yes 40 66.18 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 99192123 + NM_001317079 PGAM1 1 0.25 0.81 34 2.1 0 15 4.58 No 46 0.65 No 0 0 No -32 0.65 No 38 90.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 133294272 + NM_001170543 PGAM5 1 0.71 1.61 56 1.03 73.12 35 6.24 Yes 22 0.06 No 0 0 No -34 0.75 Yes 36 56.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 133294575 + NM_001170543 PGAM5 1 1.11 1.68 54 3.13 80.41 27 6.92 Yes 14 2.08 Yes 0 0 No -26 0.94 Yes 44 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133294575 + NM_001170543 PGAM5 1 62.78 93.83 72 3.13 80.41 27 6.92 Yes 14 2.08 Yes 0 0 No -26 0.94 Yes 44 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133295347 + NM_001170543 PGAM5 1 0.56 1.46 51 3.31 72.66 69 10.87 Yes 52 0.78 Yes 24 0.41 Yes -35 0.53 No 35 72.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 197703254 - NM_001321100 PGAP1 1 6.72 0.76 30 4.77 87.7 13 6.24 Yes 76 0.27 No 26 0.32 Yes -24 0.45 No 46 45.05 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 197726745 - NM_001321100 PGAP1 1 1.57 0.15 11 10.67 87.46 32 7.7 Yes 19 1.41 Yes 0 0 No -31 0.57 No 39 74.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 197729740 - NM_001321100 PGAP1 1 1 0.1 7 5.48 83.83 20 7 Yes 70 1.46 Yes 0 0 No -31 0.83 Yes 39 82.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 197739571 - NM_001321100 PGAP1 1 0.81 0.21 9 8.31 86.16 22 5.73 Yes 14 1.31 Yes 0 0 No -26 0.81 Yes 44 89.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 197766423 - NM_001321100 PGAP1 1 5.18 0.68 31 8.85 86.22 35 4.03 No 14 0.66 No 0 0 No -30 0.59 No 40 65.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 197786911 - NM_001321100 PGAP1 1 4.21 0.76 32 -0.07 0 12 4.24 No 49 0.15 No 31 0.42 Yes -31 0.85 Yes 39 92.31 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 197786920 - NM_001321100 PGAP1 1 1.69 0.38 19 -3.51 79.46 23 5.08 No 40 0.17 No 31 0.42 Yes -22 0.91 Yes 48 93.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 3846025 + NM_014489 PGAP2 1 1.23 0.42 23 3.35 70.98 26 5.64 Yes 13 1.24 Yes 25 0.84 Yes -25 0.75 Yes 45 67.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 37833009 - NM_033419 PGAP3 1 7.66 1.01 40 9.76 88.1 91 8.32 Yes 6 0.23 No 28 0.79 Yes -28 0.48 No 42 54.44 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 28261266 + NM_032507 PGBD1 1 3.14 0.21 13 7.52 84.81 52 4.29 No 17 0.56 No 0 0 No -29 0.96 Yes 41 96.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 249208637 + NM_170725 PGBD2 1 7.64 0.67 33 8.58 81.47 29 5.64 Yes 16 0.58 No 28 0.87 Yes -29 0.55 No 42 64.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 249211477 + NM_170725 PGBD2 1 55.97 4.43 70 8.15 88.87 26 6.61 Yes 13 1.46 Yes 25 0.89 Yes -25 0.7 Yes 45 83.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 10460432 + NM_001304452 PGD 1 0.2 0.67 32 6.05 84.23 33 6.08 Yes 20 0.78 Yes 32 0.82 Yes -32 0.94 Yes 38 86.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 10460466 + NM_001304452 PGD 1 0.64 1.19 30 6.95 81.98 20 5.1 No 54 0.79 Yes 0 0 No -36 0.67 Yes 34 81.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 10477412 + NM_001304452 PGD 1 0.04 0.22 13 0.76 68.16 34 6.17 Yes 4 0.3 No 25 0.82 Yes -25 0.54 No 54 45.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 10479433 + NM_001304452 PGD 1 0.04 0.21 12 4.74 77.81 59 7.68 Yes 46 2.09 Yes 27 0.9 Yes -30 0.65 No 40 44.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 293085 + NM_025092 PGGHG 1 0.78 0.13 8 0.27 72.62 27 5.18 No -1 0.35 No 0 0 No -20 0.69 Yes 50 74.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 293393 + NM_025092 PGGHG 1 1.17 0.15 8 6.1 80.19 37 6.02 Yes NA NA NA 0 0 No -30 0.76 Yes 40 79.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 293573 + NM_025092 PGGHG 1 1.99 0.28 15 3.25 69.84 25 5.57 Yes 65 -1.23 No 22 0.67 Yes -24 0.43 No 46 62.43 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 293669 + NM_025092 PGGHG 1 3.9 0.63 27 6.49 85.5 18 4.9 No -2 0.67 No 19 0.24 Yes -21 0.62 No 53 68.01 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 293709 + NM_025092 PGGHG 1 2.76 0.31 19 7.08 83.31 13 4.71 No 0 1.49 Yes 0 0 No -23 0.95 Yes 47 92.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 294080 + NM_025092 PGGHG 1 0.44 0.11 7 3.13 71.07 22 6.08 Yes 9 0.36 No 20 0.76 Yes -21 0.78 Yes 49 75.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 294320 + NM_025092 PGGHG 1 3.2 0.31 17 3 73.33 36 5.71 Yes 23 1.62 Yes 28 0.86 Yes -35 0.67 Yes 35 85 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 77362310 + NM_000291 PGK1 1 0.02 0.4 23 12.32 87.91 23 7.7 Yes 10 1.17 Yes 0 0 No -34 0.64 No 36 80.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 77365365 + NM_000291 PGK1 1 0.01 0.26 15 -3.58 80.59 31 6.21 Yes 18 0.4 No 0 0 No -30 0.86 Yes 40 89.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 77369531 + NM_000291 PGK1 1 0 0.1 7 5.42 86.58 22 5.29 No 35 0.99 Yes 0 0 No -47 0.66 No 23 87.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 77374364 + NM_000291 PGK1 1 0 0.11 7 9.1 87.07 22 5.08 No 0 1.58 Yes 0 0 No -22 0.6 No 45 39.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 77378727 + NM_000291 PGK1 1 0.01 0.11 7 -21.75 0 18 3.82 No 53 2.45 Yes 0 0 No -36 0.46 No 34 32.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 77380340 + NM_000291 PGK1 1 0.01 0.18 9 3.32 81.06 19 4.3 No 35 1.01 Yes 27 0.93 Yes -19 0.64 No 51 71.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 77382164 + NM_000291 PGK1 1 0.01 0.17 10 6.98 83.64 27 5.34 No 14 1.27 Yes 0 0 No -35 0.69 Yes 35 84.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17623753 + NM_012088 PGLS 1 0.22 0.39 22 9.13 83.94 16 4.61 No 3 0.08 No 25 0.66 Yes -22 0.56 No 45 59.6 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 17627176 + NM_012088 PGLS 1 0.2 0.39 21 4.59 76.75 28 5.36 No -1 0.35 No 26 0.41 Yes -28 0.56 No 43 35.35 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 17627179 + NM_012088 PGLS 1 0.34 0.68 32 6.2 82.76 31 5.62 Yes 2 0.13 No 26 0.41 Yes -31 0.52 No 40 28.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 17628521 + NM_012088 PGLS 1 0.13 0.32 20 -17.47 68.78 45 6.89 Yes 32 1.03 Yes 0 0 No -44 0.77 Yes 26 88.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 64120835 + NM_001172818 PGM1 1 0.25 0.32 19 11.26 91.79 31 7.87 Yes 18 1.45 Yes 0 0 No -30 0.97 Yes 40 97.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 37841138 + NM_018290 PGM2 1 0.73 0.88 39 7.63 85.89 23 5.66 Yes 74 0.71 No 22 0.76 Yes -22 0.62 No 48 62.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 83879561 - NM_015599 PGM3 1 1.45 0.49 26 11.15 94.08 33 5.93 Yes 12 1.11 Yes 24 0.95 Yes -24 0.65 No 46 71.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 83881775 - NM_015599 PGM3 1 0.41 0.18 11 1.01 0 38 6.57 Yes 73 0.79 Yes 24 0.79 Yes -37 0.81 Yes 33 89.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 83898514 - NM_015599 PGM3 1 1.04 0.57 33 -3.13 0 26 6.4 Yes 13 0.57 No 21 0.86 Yes -25 0.95 Yes 45 96.73 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 83901043 - NM_015599 PGM3 1 1.66 0.58 27 6.31 74.88 26 4.96 No 73 0.41 No 25 0.89 Yes -25 0.84 Yes 45 68.32 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 18459757 + NM_017712 PGPEP1 1 0.27 0.17 10 6.76 86.87 26 7.53 Yes 75 1.42 Yes 25 0.87 Yes -25 0.94 Yes 45 96.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18454087 + NM_017712 PGPEP1 1 0.14 0.11 8 1.6 80.38 27 5.06 No 37 1.62 Yes 0 0 No -26 0.84 Yes 44 89.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18459757 + NM_017712 PGPEP1 1 5.77 3.42 63 6.76 86.87 26 7.53 Yes 75 1.42 Yes 25 0.87 Yes -25 0.94 Yes 45 96.67 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18468306 + NM_017712 PGPEP1 1 2.99 1.28 48 6.56 72.45 27 6.7 Yes 60 -2.06 No 31 0.14 Yes -29 0.59 No 41 67.87 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 18474240 + NM_017712 PGPEP1 1 0.74 0.4 21 5.19 85.93 25 6.89 Yes 73 2.53 Yes 24 0.76 Yes -24 0.61 No 46 50.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 18480515 + NM_017712 PGPEP1 1 1.07 0.53 30 10.32 84.13 40 6.1 Yes 27 1.33 Yes 32 0.73 Yes -24 0.77 Yes 46 74.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18468815 + NM_017712 PGPEP1 1 1.76 1.01 45 5.03 79.98 23 5.15 No 74 0.09 No 22 0.84 Yes -22 0.6 No 48 67.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 18472499 + NM_017712 PGPEP1 1 0.41 0.15 8 11.59 80.97 38 7.03 Yes 9 1.23 Yes 0 0 No -21 0.82 Yes 33 73.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18473911 + NM_017712 PGPEP1 1 0.28 0.15 10 6.5 87.34 15 4.13 No 2 1.39 Yes 0 0 No -14 0.37 No 56 49.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18474240 + NM_017712 PGPEP1 1 3.71 2.39 58 5.19 85.93 25 6.89 Yes 73 2.53 Yes 24 0.76 Yes -24 0.61 No 46 50.25 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 18474628 + NM_017712 PGPEP1 1 0.19 0.13 7 1.6 66 47 7.75 Yes 34 0.67 No 0 0 No -46 0.64 No 24 62.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18480515 + NM_017712 PGPEP1 1 3.81 2.28 59 10.32 84.13 40 6.1 Yes 27 1.33 Yes 32 0.73 Yes -24 0.77 Yes 46 74.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chrX 118372199 + NM_006667 PGRMC1 1 0.22 0.17 10 7.22 87.01 20 6.27 Yes 45 0.54 No 0 0 No -32 0.81 Yes 38 68.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 118374244 + NM_006667 PGRMC1 1 0.32 0.26 14 0.6 67.93 15 3.86 No 47 0.17 No 22 0.7 Yes -26 0.77 Yes 44 49.27 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 76378744 + NM_024419 PGS1 1 1.7 0.65 27 4.74 84.41 39 6.4 Yes 76 -1.68 No 36 0.2 Yes -36 0.9 Yes 34 93.95 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 76388594 + NM_024419 PGS1 1 1.3 0.5 28 7.76 83.85 36 4.79 No 52 0.98 Yes 23 0.62 Yes -23 0.51 No 47 69.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 76396794 + NM_024419 PGS1 1 0.39 0.25 11 4.32 76.05 24 5.71 Yes 48 1.81 Yes 0 0 No -23 0.75 Yes 47 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76396815 + NM_024419 PGS1 1 1.71 1.15 48 10.25 88.14 30 5.48 No 69 1.81 Yes 0 0 No -44 0.37 No 41 55.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76397074 + NM_024419 PGS1 1 0.87 0.58 29 7.51 81.6 22 5.91 Yes 9 0.44 No 0 0 No -21 0.89 Yes 49 89.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76399770 + NM_024419 PGS1 1 0.62 0.36 21 5.83 91.47 18 5.23 No 69 -3.61 No 0 0 No -21 0.63 No 47 58.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76399774 + NM_024419 PGS1 1 0.34 0.24 13 -1.86 0 22 5.59 Yes -2 0.44 No 0 0 No -22 0.65 No 60 43.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76411032 + NM_024419 PGS1 1 41.45 10.86 72 7.22 83.26 27 7 Yes 14 1.74 Yes 26 0.86 Yes -32 0.66 Yes 44 84.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 76413182 + NM_024419 PGS1 1 0.82 0.21 13 6.39 89.7 23 5.2 No 10 1.02 Yes 0 0 No -22 0.85 Yes 48 63.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 76416294 + NM_024419 PGS1 1 3.59 0.85 37 6.39 79.47 24 7.87 Yes 11 1.97 Yes 31 0.86 Yes -23 0.83 Yes 47 94.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 76419272 + NM_024419 PGS1 1 1.15 0.29 16 12.21 86.4 32 10.57 Yes 19 2.31 Yes 0 0 No -31 0.92 Yes 39 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28719330 + NM_001048183 PHACTR4 1 2.16 0.76 38 -12.72 0 24 5.3 No 11 0.62 No 0 0 No -33 0.38 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28719352 + NM_001048183 PHACTR4 1 7.17 2.44 55 1.29 71.18 46 6.61 Yes 33 0.57 No 0 0 No -27 0.49 No 15 66.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28736063 + NM_001048183 PHACTR4 1 0.39 0.15 11 8.91 87.67 17 4.38 No 52 -4.12 No 0 0 No -28 0.7 Yes 48 49.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 28746911 + NM_001048183 PHACTR4 1 0.79 0.29 14 6.46 78.11 25 4.24 No 23 1.19 Yes 0 0 No -25 0.66 No 43 59.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 28759441 + NM_001048183 PHACTR4 1 5.41 2.13 60 8.51 88.27 26 6.61 Yes 17 1.68 Yes 0 0 No -25 0.58 No 41 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 28762798 + NM_001048183 PHACTR4 1 0.31 0.14 8 9.63 87.82 15 5.89 Yes 2 0.48 No 0 0 No -27 0.56 No 43 61.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28764783 + NM_001048183 PHACTR4 1 5.77 2.24 61 4.86 76.64 30 6.77 Yes 17 1.52 Yes 0 0 No -29 0.76 Yes 41 83.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28764861 + NM_001048183 PHACTR4 1 0.3 0.13 8 8.08 76.64 26 4.78 No 58 0.44 No 0 0 No -28 0.78 Yes 42 77.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 28765820 + NM_001048183 PHACTR4 1 1.17 0.46 23 11.53 95.1 37 6.08 Yes 24 0.18 No 0 0 No -23 0.92 Yes 47 92.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 28773927 + NM_001048183 PHACTR4 1 0.25 0.11 7 3.06 0 56 6.95 Yes 57 1.05 Yes 0 0 No -46 0.81 Yes 24 69.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 28784342 + NM_001048183 PHACTR4 1 21.44 8.14 72 11.29 84.31 24 7 Yes 11 1.24 Yes 0 0 No -26 0.5 No 44 69.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 28784843 + NM_001048183 PHACTR4 1 0.36 0.14 9 6.82 81.47 26 6.08 Yes 13 1.04 Yes 0 0 No -25 0.9 Yes 45 94.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28786728 + NM_001048183 PHACTR4 1 0.19 0.18 10 0.34 0 14 3.77 No 20 0.96 Yes 0 0 No -32 0.8 Yes 38 77.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28798130 + NM_001048183 PHACTR4 1 0.46 0.31 18 8.03 91.62 19 5.94 Yes 6 1.05 Yes 0 0 No -23 0.73 Yes 47 73.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28802623 + NM_001048183 PHACTR4 1 0.59 0.57 30 -0.31 0 37 5.06 No 2 0.61 No 0 0 No -36 0.43 No 47 40.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28816285 + NM_001048183 PHACTR4 1 1.15 1.06 41 8.96 94.28 31 5.74 Yes 18 1.06 Yes 30 0.95 Yes -30 0.86 Yes 40 87.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 28818166 + NM_001048183 PHACTR4 1 0.09 0.1 7 1.11 0 26 5.09 No 13 0.49 No 0 0 No -25 0.78 Yes 45 79.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 28820741 + NM_001048183 PHACTR4 1 0.93 0.53 30 7.33 86.46 47 5.24 No 34 0.33 No 31 0.32 Yes -31 0.78 Yes 39 78.26 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 28821385 + NM_001048183 PHACTR4 1 1.07 0.63 27 6.51 86.24 28 4.85 No 45 -2.5 No 0 0 No -24 0.54 No 46 58.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 125939265 + NM_032177 PHAX 1 0.42 0.54 30 -3.36 0 28 7.47 Yes 62 0.86 Yes 32 0.44 Yes -27 0.89 Yes 43 84.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 125939993 + NM_032177 PHAX 1 0.08 0.14 10 2.52 0 37 7.65 Yes 24 0.97 Yes 0 0 No -40 0.58 No 30 73.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 47491696 - NM_001281497 PHB 1 2.36 11.11 72 3.57 73.38 30 5.83 Yes 38 1.28 Yes 29 0.78 Yes -27 0.68 Yes 43 78.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7075630 - NM_001267700 PHB2 1 0.1 1.24 52 6.6 85.5 24 5.29 No 55 0.84 Yes 0 0 No -23 0.87 Yes 47 82.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7077751 - NM_001267700 PHB2 1 0.09 0.96 42 0.24 0 17 4.11 No 9 2.24 Yes 27 0.92 Yes -35 0.41 No 49 56.65 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 7077872 - NM_001267700 PHB2 1 0.1 1 46 10.8 89.74 17 4.45 No 4 1.57 Yes 26 0.87 Yes -26 0.7 Yes 44 65.42 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 7077872 - NM_001267700 PHB2 1 0.02 0.19 12 10.8 89.74 17 4.45 No 4 1.57 Yes 26 0.87 Yes -26 0.7 Yes 44 65.42 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 7079227 - NM_001267700 PHB2 1 0.06 0.53 30 -0.59 0 46 7.16 Yes 7 1.08 Yes 23 0.72 Yes -45 0.88 Yes 25 85.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7079232 - NM_001267700 PHB2 1 0.04 0.33 20 10.55 78.46 41 6.85 Yes 2 1.11 Yes 23 0.72 Yes -40 0.88 Yes 30 87.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 33791751 - NM_198040 PHC2 1 0.38 0.17 8 2.3 77.9 56 7.34 Yes 43 1.14 Yes 0 0 No -32 0.72 Yes 38 69.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33793029 - NM_198040 PHC2 1 2.78 1.44 56 11.17 86.84 34 5.83 Yes 21 1.05 Yes 0 0 No -33 0.41 No 37 56.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 33797301 - NM_198040 PHC2 1 1.38 0.54 27 8.83 85.47 29 6.8 Yes 16 1.77 Yes 28 0.94 Yes -28 0.45 No 42 88.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 169816818 - NM_024947 PHC3 1 0.26 0.22 13 -3.9 0 56 5.85 Yes 53 1.24 Yes 0 0 No -59 0.43 No 26 68.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 169820094 - NM_024947 PHC3 1 6.54 5.68 71 6.54 85.34 49 6.02 Yes 36 0.89 Yes 0 0 No -28 0.54 No 31 40.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 169820474 - NM_024947 PHC3 1 5.54 5.5 71 7.31 88.81 17 5.52 No 4 0.58 No 27 0.58 Yes -27 0.74 Yes 43 80.03 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 169824726 - NM_024947 PHC3 1 0.22 0.22 12 -12.5 0 12 4 No 39 0.13 No 0 0 No -51 0.47 No 19 69.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 169824733 - NM_024947 PHC3 1 0.8 0.72 36 -0.96 82.47 49 5.97 Yes 32 0.15 No 0 0 No -44 0.54 No 26 58.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 169843796 - NM_024947 PHC3 1 0.49 0.38 24 3.43 72.83 20 5.56 Yes 7 0.41 No 0 0 No -19 0.64 No 51 78.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 169846176 - NM_024947 PHC3 1 12.79 9.96 72 5.6 86.9 17 4.75 No 51 0.95 Yes 25 0.93 Yes -25 0.82 Yes 45 91.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 169846197 - NM_024947 PHC3 1 4.96 3.83 68 9.36 90.01 60 6.65 Yes 30 0.95 Yes 25 0.93 Yes -31 0.42 No 39 62.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 169846526 - NM_024947 PHC3 1 0.26 0.29 16 8.59 86.07 21 5.17 No 55 -2.75 No 0 0 No -25 0.6 No 45 84.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 169846625 - NM_024947 PHC3 1 0.18 0.19 12 5.12 82.61 15 5.2 No 2 0.79 Yes 25 0.24 Yes -26 0.63 No 50 49.22 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 169862123 - NM_024947 PHC3 1 2.75 3.35 67 3.01 0 31 7.18 Yes 18 0.5 No 0 0 No -30 0.8 Yes 40 78.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 169868498 - NM_024947 PHC3 1 0.59 0.56 29 13.38 87.44 37 6.92 Yes 59 1.08 Yes 36 0.63 Yes -36 0.92 Yes 34 90.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 169880910 - NM_024947 PHC3 1 1.74 1.63 53 8.74 79.83 24 6.14 Yes 54 0.93 Yes 0 0 No -35 0.68 Yes 35 64.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 169889253 - NM_024947 PHC3 1 0.35 0.22 12 1.3 65.04 32 5.74 Yes 67 0.88 Yes 18 0.83 Yes -32 0.54 No 38 64.77 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 169890489 - NM_024947 PHC3 1 5.24 4.99 71 1.43 0 20 4.17 No 63 0.35 No 26 0.86 Yes -19 0.89 Yes 51 90.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 170117318 - NM_018288 PHF10 1 0.3 0.25 15 5.26 92.78 27 5.19 No 32 1.4 Yes 0 0 No -26 0.88 Yes 44 90.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170117338 - NM_018288 PHF10 1 1.75 1.39 48 6.88 92.41 25 6.25 Yes 12 1.4 Yes 0 0 No -32 0.51 No 38 76.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 170117997 - NM_018288 PHF10 1 23.09 19.82 72 -0.72 0 16 3.83 No 9 0.74 No 26 0.9 Yes -32 0.86 Yes 38 91.33 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 27234066 - NM_001033561 PHF12 1 0.3 0.21 13 10.85 76.64 22 6.56 Yes 76 -2.72 No 0 0 No -33 0.66 No 37 71.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 27237335 - NM_001033561 PHF12 1 0.36 0.25 14 6.01 89.31 22 4.9 No 74 1.01 Yes 0 0 No -21 0.87 Yes 49 95.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27237852 - NM_001033561 PHF12 1 1.01 0.71 32 0.7 68.34 24 5 No 48 -4.36 No 23 0.9 Yes -21 0.62 No 49 33.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 27238403 - NM_001033561 PHF12 1 3.08 2.1 61 5.14 69.21 16 8.28 Yes 3 1.22 Yes 29 0.86 Yes -29 0.62 No 41 79.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 27239700 - NM_001033561 PHF12 1 1.94 0.88 38 9.83 83.68 24 5.04 No 71 -1 No 0 0 No -23 0.54 No 47 70.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 27242467 - NM_001033561 PHF12 1 0.3 0.25 16 9.93 80.67 24 5.93 Yes 56 1.6 Yes 0 0 No -23 0.92 Yes 47 93.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 11021998 + NR_033436 PHF14 1 726.89 63.54 72 9.59 83.67 14 8.39 Yes 1 0.83 Yes 36 0.13 Yes -36 0.59 No 34 69.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 11078596 + NR_033436 PHF14 1 0.16 0.14 10 2.5 89.36 24 5 No 11 1.72 Yes 0 0 No -23 0.88 Yes 47 95.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 11091242 + NR_033436 PHF14 1 0.3 0.33 20 1.45 0 41 5 No 17 0.66 No 0 0 No -25 0.71 Yes 45 57.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 11102297 + NR_033436 PHF14 1 1.59 1.44 51 6.92 93.81 66 8.77 Yes 53 1.17 Yes 21 0.3 Yes -21 0.41 No 41 48.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 11131506 + NR_033436 PHF14 1 0.31 0.28 16 5.11 75.86 23 6.53 Yes 10 1.28 Yes 0 0 No -22 0.56 No 48 57.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 11142112 + NR_033436 PHF14 1 8.73 7.83 72 7.17 77.99 31 6.98 Yes 18 1.48 Yes 30 0.73 Yes -30 0.74 Yes 40 90.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 11142994 + NR_033436 PHF14 1 0.25 0.25 14 2.92 60.7 35 6.82 Yes 63 0.48 No 29 0.74 Yes -40 0.64 No 30 61.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 11143080 + NR_033436 PHF14 1 0.27 0.22 12 7.06 90.29 23 4.7 No 76 -4.98 No 0 0 No -22 0.95 Yes 48 94.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 11150148 + NR_033436 PHF14 1 0.71 0.64 30 3.05 87.42 25 5.2 No 44 1.17 Yes 27 0.54 Yes -24 0.7 Yes 46 86.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 11150151 + NR_033436 PHF14 1 0.54 0.46 24 7.41 88.32 28 5.48 No 47 1.16 Yes 27 0.54 Yes -27 0.68 Yes 43 85.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 11174193 + NR_033436 PHF14 1 0.19 0.15 8 8.98 92.06 23 4.9 No 10 0.55 No 0 0 No -22 0.97 Yes 48 96.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 11182932 + NR_033436 PHF14 1 3.24 2.29 62 5.89 84.45 31 7.72 Yes 18 1.08 Yes 0 0 No -30 0.76 Yes 40 49.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 11203970 + NR_033436 PHF14 1 0.54 0.38 22 4.53 76.81 30 5.48 No 71 0.79 Yes 0 0 No -29 0.43 No 41 45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123622435 - NM_001286840 PHF19 1 3.57 4.04 68 3.17 84.12 21 4.69 No 36 1.39 Yes 0 0 No -20 0.89 Yes 50 79.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123628066 - NM_001286840 PHF19 1 0.8 0.46 23 0.58 70.51 30 7.21 Yes 63 1.29 Yes 20 0.73 Yes -29 0.86 Yes 41 93.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 123628187 - NM_001286840 PHF19 1 0.22 0.14 7 7.7 80.53 21 6.44 Yes NA NA NA 0 0 No -20 0.54 No 49 61.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123631605 - NM_001286840 PHF19 1 2.07 1.03 44 0.15 0 29 8.81 Yes 16 1.03 Yes 0 0 No -28 0.94 Yes 42 92.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123631605 - NM_001286840 PHF19 1 0.69 0.36 17 0.15 0 29 8.81 Yes 16 1.03 Yes 0 0 No -28 0.94 Yes 42 92.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123634514 - NM_001286840 PHF19 1 0.7 1.83 53 2.49 78.13 23 6.01 Yes 10 0.99 Yes 0 0 No -22 0.57 No 48 61.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 96399803 + NM_005392 PHF2 1 0.49 0.15 9 10.15 85.58 23 6.32 Yes 10 1.71 Yes 0 0 No -22 0.86 Yes 48 87.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 96416799 + NM_005392 PHF2 1 7.4 2.72 64 5.58 89.17 27 4.87 No 17 1.37 Yes 0 0 No -29 0.64 No 41 66.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 96425773 + NM_005392 PHF2 1 0.77 0.24 16 5.58 74.84 39 6.42 Yes 14 2.2 Yes 27 0.91 Yes -26 0.61 No 32 80.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 96428019 + NM_005392 PHF2 1 1.21 0.42 22 6.98 77.5 31 5.83 Yes 61 2.47 Yes 0 0 No -27 0.72 Yes 43 70.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 96429358 + NM_005392 PHF2 1 437.86 28.15 72 4.33 80.99 25 5.1 No 12 2.08 Yes 27 0.93 Yes -24 0.93 Yes 46 95.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 34362409 + NM_016436 PHF20 1 37.41 14.1 72 11.92 90.46 39 6.45 Yes 26 0.73 No 0 0 No -38 0.88 Yes 32 77.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 34366978 + NM_016436 PHF20 1 0.8 0.29 16 6.24 88.31 50 6.86 Yes 37 0.34 No 0 0 No -49 0.5 No 21 57.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 34370249 + NM_016436 PHF20 1 1.05 0.4 24 7.33 91.67 15 5.42 No 2 1.59 Yes 24 0.67 Yes -24 0.79 Yes 46 51.47 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 34371382 + NM_016436 PHF20 1 0.24 0.1 7 5.99 84.79 45 7.67 Yes 2 1.6 Yes 0 0 No -44 0.7 Yes 26 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34388015 + NM_016436 PHF20 1 0.41 0.18 11 6.71 91.27 30 7.74 Yes 73 1.19 Yes 29 0.83 Yes -29 0.79 Yes 41 78.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 34392028 + NM_016436 PHF20 1 0.13 0.1 7 -1.46 0 45 7.94 Yes 32 1.6 Yes 0 0 No -44 0.9 Yes 26 95.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34400544 + NM_016436 PHF20 1 6.54 5.75 70 7.32 94.48 17 5.36 No 67 1.29 Yes 0 0 No -22 0.8 Yes 48 90.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34411179 + NM_016436 PHF20 1 3.54 3.07 61 8.84 88.45 19 4.82 No 6 0.44 No 0 0 No -29 0.59 No 46 73.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 34440857 + NM_016436 PHF20 1 0.39 0.22 12 9.08 86.5 34 6.39 Yes 21 2.02 Yes 0 0 No -33 0.64 No 37 78.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 34450954 + NM_016436 PHF20 1 2.11 1.68 52 1.27 62.77 28 5.38 No 63 1.09 Yes 0 0 No -27 0.57 No 43 85.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 34471273 + NM_016436 PHF20 1 0.23 0.15 10 7.81 88.08 33 6.96 Yes 20 2.09 Yes 0 0 No -32 0.81 Yes 38 92.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 133790041 + NM_016018 PHF20L1 1 162.34 24.33 72 1.63 0 25 10.3 Yes 12 1.81 Yes 28 0.59 Yes -24 0.75 Yes 46 89.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 133793134 + NM_016018 PHF20L1 1 0.52 0.44 25 7.54 95.29 26 5.1 No 46 0.76 No 0 0 No -25 0.66 Yes 12 66.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 133793281 + NM_016018 PHF20L1 1 0.19 0.18 9 5.46 87.11 26 6.54 Yes 13 0.33 No 0 0 No -25 0.91 Yes 45 95.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 133793684 + NM_016018 PHF20L1 1 0.24 0.19 12 1.26 0 49 7.41 Yes 36 1.14 Yes 0 0 No -40 0.38 No 30 59.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 133801049 + NM_016018 PHF20L1 1 0.42 0.38 18 9.29 86.49 27 6.66 Yes 58 -2.43 No 32 0.61 Yes -26 0.65 No 44 77.41 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr8 133806965 + NM_016018 PHF20L1 1 0.2 0.21 12 1.32 67.42 26 4.42 No 14 -2.82 No 18 0.83 Yes -26 0.48 No 40 59.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 133808211 + NM_016018 PHF20L1 1 0.17 0.15 9 8.51 87.39 104 6.07 Yes 0 1.6 Yes 0 0 No -26 0.97 Yes 44 95.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 133811328 + NM_016018 PHF20L1 1 73.83 5.33 72 -7 0 18 4.11 No 34 0.32 No 18 0.52 Yes -53 0.41 No 17 30.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 133811548 + NM_016018 PHF20L1 1 1.03 0.15 8 3.98 65.92 43 4.83 No 24 0.88 Yes 0 0 No -29 0.81 Yes 41 58.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 133816856 + NM_016018 PHF20L1 1 29.43 20.63 72 1.59 73.47 22 4.59 No 9 0.63 No 21 0.79 Yes -21 0.78 Yes 49 77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 133819929 + NM_016018 PHF20L1 1 0.96 0.79 37 11.22 93.83 40 7.35 Yes 27 1.9 Yes 18 0.17 Yes -39 0.85 Yes 31 93.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 133829120 + NM_016018 PHF20L1 1 0.13 0.1 7 2.42 63.34 40 6.78 Yes 63 0.34 No 22 0.38 Yes -32 0.38 No 30 30.58 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 133837279 + NM_016018 PHF20L1 1 1.01 0.5 29 9.88 76.76 25 4.62 No 61 0.88 Yes 24 0.83 Yes -24 0.62 No 33 75.07 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 133855276 + NM_016018 PHF20L1 1 0.56 0.46 26 12.76 98.23 27 5.48 No 19 0.05 No 0 0 No -27 0.64 No 43 65.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 133856397 + NM_016018 PHF20L1 1 3.04 2.39 64 -1.21 73.25 51 8.73 Yes 38 1.63 Yes 43 0.71 Yes -40 0.87 Yes 30 75.56 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 133856407 + NM_016018 PHF20L1 1 0.13 0.1 7 -11.36 0 13 2.98 No 48 1.62 Yes 0 0 No -50 0.86 Yes 15 76.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 45956709 - NM_016621 PHF21A 1 2.4 1.35 46 7.65 83.09 28 9.21 Yes 15 1.4 Yes 27 0.93 Yes -27 0.77 Yes 43 92.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 45956798 - NM_016621 PHF21A 1 7.42 4.13 67 6.2 74.36 12 5.74 Yes -1 0.8 Yes 26 0.4 Yes -29 0.76 Yes 41 50.99 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 45970525 - NM_016621 PHF21A 1 0.32 0.15 9 1.28 70.94 18 3.96 No 52 0.63 No 32 0.92 Yes -21 0.55 No 49 40.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 45975173 - NM_016621 PHF21A 1 0.15 0.11 8 3.53 0 139 10.63 Yes 53 1.43 Yes 27 0.68 Yes -31 0.7 Yes 39 69.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 45991453 - NM_016621 PHF21A 1 11.75 8.18 72 7.02 95.01 43 7.04 Yes 30 1.39 Yes 22 0.69 Yes -25 0.72 Yes 45 47.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 45991453 - NM_016621 PHF21A 1 0.2 0.15 9 7.02 95.01 43 7.04 Yes 30 1.39 Yes 22 0.69 Yes -25 0.72 Yes 45 47.1 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 45992916 - NM_016621 PHF21A 1 13.96 8.24 71 4.6 75.98 28 6.56 Yes 15 1.47 Yes 0 0 No -27 0.8 Yes 43 87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46001525 - NM_016621 PHF21A 1 0.17 0.13 7 0.64 0 28 6.35 Yes 15 1.72 Yes 34 0.81 Yes -27 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 46064048 - NM_016621 PHF21A 1 0.15 0.14 8 11.09 85.31 27 6.98 Yes 14 0.87 Yes 0 0 No -26 0.69 Yes 37 62.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 46071049 - NM_016621 PHF21A 1 0.95 0.92 37 11.31 82.8 32 10.39 Yes 19 2.38 Yes 31 0.89 Yes -31 0.64 No 39 87.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 46088743 - NM_016621 PHF21A 1 0.14 0.13 8 9.98 89.43 24 5.21 No 11 1.04 Yes 0 0 No -23 0.85 Yes 47 72.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46096630 - NM_016621 PHF21A 1 0.16 0.14 10 1.43 69.13 19 5.66 Yes 6 1.43 Yes 0 0 No -18 0.53 No 44 46.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 46096713 - NM_016621 PHF21A 1 0.19 0.17 12 7.88 90.03 32 6.28 Yes 19 1.68 Yes 0 0 No -31 0.66 No 39 71.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 46096978 - NM_016621 PHF21A 1 0.42 0.39 19 1.83 0 14 4.47 No 1 1.58 Yes 0 0 No -20 0.55 No 50 78.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 46098392 - NM_016621 PHF21A 1 2.16 1.97 58 8.3 90.08 25 7.28 Yes 49 0.58 No 24 0.86 Yes -24 0.89 Yes 46 88.56 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46105163 - NM_016621 PHF21A 1 0.85 0.81 41 8.95 85.18 32 5.7 Yes 19 0.12 No 23 0.62 Yes -20 0.58 No 50 75.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 46112108 - NM_016621 PHF21A 1 0.69 0.28 17 -1.03 0 18 4.36 No 18 0.06 No 0 0 No -17 0.62 No 53 51.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 46112118 - NM_016621 PHF21A 1 54.67 21.51 72 7.5 97.37 21 4.84 No 8 0.05 No 19 0.33 Yes -20 0.72 Yes 50 72.72 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 46112133 - NM_016621 PHF21A 1 1.84 0.72 36 -2.98 0 16 4.11 No 67 -5.69 No 19 0.33 Yes -15 0.72 Yes 51 41.4 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 46140352 - NM_016621 PHF21A 1 3.09 0.94 44 6.27 87.8 21 5.32 No 61 0.16 No 20 0.78 Yes -26 0.57 No 44 64.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7139119 - NM_001284518 PHF23 1 0.21 0.17 10 0.77 66.92 22 4.19 No 26 -2.01 No 0 0 No -21 0.65 No 39 78.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7139886 - NM_001284518 PHF23 1 8.21 7.68 71 11.54 92.86 25 4.06 No 75 -4.86 No 25 0.66 Yes -25 0.72 Yes 45 54.89 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 64381186 + NM_015153 PHF3 1 0.48 0.21 12 2.21 77.36 57 7.76 Yes 65 0.49 No 0 0 No -33 0.44 No 47 71.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 64381668 + NM_015153 PHF3 1 0.68 0.29 17 3.39 83.32 31 5.92 Yes 30 0.85 Yes 0 0 No -30 0.95 Yes 40 98.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 64388728 + NM_015153 PHF3 1 14.56 6.19 70 11.87 84.42 31 5.51 No 75 0.5 No 30 0.89 Yes -30 0.95 Yes 40 97.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 64404473 + NM_015153 PHF3 1 0.16 0.18 12 -16.41 75.08 25 4.04 No 15 0.86 Yes 0 0 No -27 0.79 Yes 43 90.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 64405296 + NM_015153 PHF3 1 0.09 0.13 7 12.28 91.64 18 3.39 No 31 0.17 No 0 0 No -26 0.52 No 46 73.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 64408346 + NM_015153 PHF3 1 0.18 0.17 11 -1.57 0 17 4.12 No 74 0.8 Yes 0 0 No -30 0.49 No 40 58.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 64414721 + NM_015153 PHF3 1 0.09 0.14 7 3.98 88.53 30 5.26 No 33 0.17 No 0 0 No -29 0.93 Yes 41 96.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 64416623 + NM_015153 PHF3 1 0.13 0.14 8 2.4 0 20 5.98 Yes 7 0.75 No 0 0 No -29 0.81 Yes 41 89.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 41858741 - NM_032758 PHF5A 1 1.12 2.58 65 10.79 92.06 23 5 No 15 1.49 Yes 0 0 No -22 0.86 Yes 48 93.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41863530 - NM_032758 PHF5A 1 0.26 0.64 31 3.7 78.64 18 4.91 No 53 0.73 No 0 0 No -26 0.79 Yes 44 88.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 133528190 + NM_001015877 PHF6 1 0.08 0.17 12 1.17 62.28 34 6.17 Yes 21 1.49 Yes 0 0 No -33 0.88 Yes 37 91.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 133547517 + NM_001015877 PHF6 1 23.53 44.92 72 4.23 79.47 24 5.2 No 36 1.3 Yes 26 0.51 Yes -24 0.64 No 46 79.25 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 133560191 + NM_001015877 PHF6 1 0.18 0.33 16 6.95 80.93 34 6.08 Yes 67 0.47 No 0 0 No -33 0.48 No 37 60.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 54044509 - NM_001184898 PHF8 1 0.58 0.32 20 8.62 94.07 26 5.66 Yes 51 1.21 Yes 0 0 No -25 0.35 No 45 62.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 54062533 - NM_001184898 PHF8 1 0.41 0.29 16 4.74 84.41 42 10.14 Yes 39 2.51 Yes 0 0 No -41 0.63 No 29 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 54066506 - NM_001184898 PHF8 1 0.42 0.28 17 8.85 81.44 30 6.8 Yes 17 1.2 Yes 21 0.59 Yes -30 0.31 No 41 64.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 54068178 - NM_001184898 PHF8 1 0.16 0.13 9 5.32 92.42 11 5 No -2 -2.02 No 0 0 No -21 0.81 Yes 49 76.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 120266941 + NM_006623 PHGDH 1 0.24 0.43 23 9.61 92.76 26 5.54 No 33 0.14 No 25 0.7 Yes -25 0.74 Yes 45 81.03 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 120272098 + NM_006623 PHGDH 1 0.06 0.13 8 9.93 84.14 23 5.29 No 68 0.21 No 22 0.3 Yes -23 0.69 Yes 47 59.83 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 120277729 + NM_006623 PHGDH 1 0.09 0.18 10 -0.67 0 18 3.09 No 16 0.57 No 0 0 No -17 0.52 No 53 55.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 79651045 - NM_017934 PHIP 1 0.43 0.42 24 -6.18 76.13 27 5.72 Yes 14 0.36 No 0 0 No -26 0.78 Yes 44 83.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 79655166 - NM_017934 PHIP 1 0.11 0.14 7 4.73 81.97 15 5.28 No 72 1.56 Yes 0 0 No -21 0.36 No 42 70.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 79656325 - NM_017934 PHIP 1 0.46 0.72 36 8.18 85.88 51 6.28 Yes 53 0.94 Yes 0 0 No -30 0.75 Yes 40 80.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 79667818 - NM_017934 PHIP 1 0.19 0.15 9 5.7 81.86 76 5.8 Yes 18 1.56 Yes 0 0 No -30 0.56 No 49 48.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 79671526 - NM_017934 PHIP 1 0.06 0.11 7 -7.72 0 31 4.52 No 5 0.26 No 0 0 No -25 0.8 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 79679809 - NM_017934 PHIP 1 0.13 0.14 9 9.44 82.31 16 6.66 Yes 3 0.74 No 0 0 No -20 0.58 No 39 76.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 79695142 - NM_017934 PHIP 1 0.16 0.22 11 -5.91 0 29 5.84 Yes 62 1.36 Yes 0 0 No -24 0.42 No 38 41.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 79700700 - NM_017934 PHIP 1 8.98 10.9 72 6.54 86.52 28 6.32 Yes 57 1.4 Yes 0 0 No -27 0.88 Yes 43 86.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 79711868 - NM_017934 PHIP 1 0.2 0.25 13 6.22 92.4 44 5.31 No 8 1.06 Yes 20 0.39 Yes -24 0.86 Yes 46 77.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 79714154 - NM_017934 PHIP 1 9.36 9.06 72 8.8 87.91 27 6.31 Yes 14 0.68 No 0 0 No -26 0.89 Yes 44 94.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 79714252 - NM_017934 PHIP 1 0.14 0.14 9 7.22 90.46 12 5.2 No 41 0.77 Yes 0 0 No -25 0.43 No 45 63.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 79725540 - NM_017934 PHIP 1 0.11 0.11 7 4.55 86.1 37 6.16 Yes 70 0.58 No 26 0.88 Yes -36 0.77 Yes 34 78.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 79735364 - NM_017934 PHIP 1 0.12 0.15 8 5.11 75.17 21 5.71 Yes 58 1.91 Yes 30 0.63 Yes -20 0.72 Yes 50 58.38 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 79742493 - NM_017934 PHIP 1 0.22 0.35 20 6.87 75.05 31 5.42 No 72 0.82 Yes 0 0 No -26 0.76 Yes 40 67.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 79752457 - NM_017934 PHIP 1 0.29 0.53 27 10.31 90.44 28 5.5 No 15 0.66 No 0 0 No -27 0.39 No 43 45.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 79761778 - NM_017934 PHIP 1 0.13 0.19 11 9.08 81.86 21 4.66 No 20 0.98 Yes 0 0 No -32 0.46 No 37 69.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 79773628 - NM_017934 PHIP 1 0.23 0.31 19 7.73 90.14 26 5.43 No 28 0.05 No 0 0 No -25 0.82 Yes 45 86.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 18921029 - NM_000292 PHKA2 1 2.79 0.96 45 5.01 67.3 38 8.03 Yes 63 0.62 No 26 0.63 Yes -37 0.31 No 44 49.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 18948966 - NM_000292 PHKA2 1 0.72 0.22 11 2.5 65 22 5.28 No 52 -3.69 No 0 0 No -21 0.7 Yes 52 63.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 18954320 - NM_000292 PHKA2 1 1.4 0.42 21 5.46 76.36 35 6.24 Yes 35 1.47 Yes 0 0 No -37 0.51 No 33 63.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 18956867 - NM_000292 PHKA2 1 0.37 0.15 10 -4.34 0 18 4.89 No 26 1.56 Yes 0 0 No -25 0.65 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 18961923 - NM_000292 PHKA2 1 0.34 0.1 7 1.93 0 25 5.58 Yes 12 1.35 Yes 0 0 No -24 0.64 No 46 64.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 18963446 - NM_000292 PHKA2 1 0.96 0.28 17 4.37 72.01 28 8.03 Yes 64 -2.12 No 0 0 No -27 0.53 No 38 73.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 47496251 + NM_000293 PHKB 1 8.68 0.61 27 0.5 65.21 26 6.48 Yes 13 0.97 Yes 25 0.89 Yes -25 0.89 Yes 45 88.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 47497792 + NM_000293 PHKB 1 181.27 12.9 71 5.38 79.67 60 6.31 Yes 13 1.58 Yes 25 0.91 Yes -25 0.49 No 39 72.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 47497809 + NM_000293 PHKB 1 698.42 49.22 72 3.26 65.4 23 5.06 No 30 1.56 Yes 25 0.91 Yes -22 0.78 Yes 48 66.2 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 47497814 + NM_000293 PHKB 1 10.63 0.75 40 -2.17 0 28 5.53 No 35 1.56 Yes 0 0 No -27 0.77 Yes 43 51.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 47547686 + NM_000293 PHKB 1 0.25 0.46 22 6.53 91.36 32 7.74 Yes 19 0.59 No 0 0 No -29 0.92 Yes 41 93.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 47549860 + NM_000293 PHKB 1 0.3 0.26 15 4.56 84.41 25 5.07 No 16 0.97 Yes 0 0 No -28 0.85 Yes 42 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 47581594 + NM_000293 PHKB 1 1.5 1.29 47 7.57 76.84 34 5.83 Yes 21 0.16 No 0 0 No -33 0.84 Yes 37 86.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 47596308 + NM_000293 PHKB 1 2.82 2.32 61 9.64 88.77 28 5.74 Yes 15 0.51 No 27 0.82 Yes -27 0.94 Yes 43 94.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 47621410 + NM_000293 PHKB 1 0.8 0.76 34 6.56 87.33 37 7.45 Yes 1 0.87 Yes 0 0 No -25 0.36 No 42 34.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 47624215 + NM_000293 PHKB 1 2.24 2.33 70 8.79 87 25 7.12 Yes 12 1.1 Yes 24 0.82 Yes -37 0.56 No 45 70.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 47631714 + NM_000293 PHKB 1 0.43 0.56 32 10.38 91.45 16 5.35 No 3 0.91 Yes 26 0.8 Yes -26 0.71 Yes 44 63.59 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 47653040 + NM_000293 PHKB 1 0.28 0.26 17 9.48 92.66 27 5.56 Yes 27 0.94 Yes 26 0.77 Yes -26 0.85 Yes 44 77.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 47667809 + NM_000293 PHKB 1 1.71 1.49 54 4.84 74.05 35 9.05 Yes 22 2.33 Yes 0 0 No -34 0.72 Yes 36 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 47684743 + NM_000293 PHKB 1 0.1 0.11 8 -1.06 86.64 35 8.22 Yes 22 0.86 Yes 0 0 No -34 0.74 Yes 36 88.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 47709496 + NM_000293 PHKB 1 2.95 1.57 56 9.38 84.96 22 8.42 Yes 13 1.55 Yes 25 0.86 Yes -25 0.89 Yes 45 74.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 47733066 + NM_000293 PHKB 1 0.13 0.15 9 5.1 78.32 21 5.25 No 36 0.68 No 25 0.81 Yes -25 0.78 Yes 45 85.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30764366 + NM_000294 PHKG2 1 0.32 0.15 8 2.99 73.12 52 7.2 Yes 13 0.66 No 0 0 No -25 0.35 No 19 77.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 30764505 + NM_000294 PHKG2 1 1.44 0.79 34 5.64 86.74 22 5.29 No 37 -0.99 No 0 0 No -24 0.61 No 49 62.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30765024 + NM_000294 PHKG2 1 0.09 0.1 7 -1.19 59.87 21 5.17 No 61 -4.14 No 0 0 No -24 0.26 No 50 31.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30766195 + NM_000294 PHKG2 1 0.91 0.86 38 9.79 90.85 31 6.39 Yes 0 1.28 Yes 30 0.94 Yes -30 0.95 Yes 40 94.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30771439 + NM_000294 PHKG2 1 0.27 0.11 8 7.48 82.19 29 6.62 Yes 37 -2.74 No 28 0.42 Yes -29 0.59 No 41 81.2 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr16 30767675 + NM_000294 PHKG2 1 14.74 8.68 71 2.82 75.29 23 5 No 67 0.87 Yes 22 0.94 Yes -22 0.86 Yes 48 74.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 44005496 - NM_198850 PHLDB3 1 7.34 0.64 28 -1.52 65.39 46 7.79 Yes 57 -2 No 0 0 No -20 0.58 No 50 36.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 44005499 - NM_198850 PHLDB3 1 1.56 0.28 16 -4.39 47.71 43 7.6 Yes 54 -2 No 0 0 No -33 0.32 No 53 19.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 60562287 + NM_194449 PHLPP1 1 1.02 0.18 12 6.36 69.96 22 4.7 No 76 1.59 Yes 0 0 No -22 0.67 Yes 48 60.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 71683972 - NM_015020 PHLPP2 1 1.25 0.35 18 7.44 88.68 20 5.51 No 7 1.36 Yes 26 0.85 Yes -19 0.84 Yes 51 88.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 71690538 - NM_015020 PHLPP2 1 0.24 0.15 8 4.73 80.91 25 5.29 No 56 0.77 No 0 0 No -24 0.92 Yes 46 87.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 71722843 - NM_015020 PHLPP2 1 0.35 0.13 7 1.72 0 21 4.58 No 12 1.33 Yes 0 0 No -20 0.73 Yes 46 49.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 170554402 + NM_001199286 PHOSPHO2 1 3.2 0.53 26 7.93 86.24 22 5.66 Yes 48 0.56 No 0 0 No -30 0.48 No 49 49.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 170554410 + NM_001199286 PHOSPHO2 1 0.68 0.1 7 -5.68 0 17 3.73 No 56 0.56 No 0 0 No -38 0.3 No 41 42.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 170599076 + NR_144936 PHOSPHO2-KLHL23 1 0.57 0.22 12 11.54 93.87 22 6 Yes 9 1.15 Yes 0 0 No -21 0.69 Yes 49 73.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 170601089 + NR_144936 PHOSPHO2-KLHL23 1 0.79 0.38 19 2.59 84.41 19 5.85 Yes 6 0.91 Yes 0 0 No -28 0.56 No 42 72.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 139744954 + NM_001287342 PHPT1 1 1.58 10.01 72 0.25 57.27 37 6.38 Yes 24 0.33 No 27 0.71 Yes -36 0.61 No 34 79.81 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 139744957 + NM_001287342 PHPT1 1 3.92 25.07 72 0.51 63.39 40 6.61 Yes 27 0.33 No 27 0.71 Yes -39 0.44 No 31 72.64 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 139745188 + NM_001287342 PHPT1 1 0.04 0.24 14 -6.63 0 16 4.24 No 11 -1.46 No 23 0.89 Yes -15 0.23 No 52 34.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 139745374 + NM_001287342 PHPT1 1 0.04 0.28 14 11.05 90.55 35 5.83 Yes 64 0.96 Yes 0 0 No -34 0.86 Yes 36 89.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 581964 + NM_001286581 PHRF1 1 33.74 17.29 72 0.14 67.75 42 8.76 Yes 29 1.2 Yes 38 0.28 Yes -41 0.73 Yes 29 84.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 582289 + NM_001286581 PHRF1 1 0.2 0.17 7 4.19 0 31 6.59 Yes 44 1.48 Yes 0 0 No -30 0.91 Yes 40 94.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 597458 + NM_001286581 PHRF1 1 0.1 0.11 8 2.57 71.14 47 6.1 Yes 7 1.17 Yes 0 0 No -19 0.71 Yes 51 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 601577 + NM_001286581 PHRF1 1 0.25 0.18 10 -3.74 0 21 5.5 No 8 0.09 No 0 0 No -20 0.72 Yes 50 71.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 603341 + NM_001286581 PHRF1 1 0.15 0.13 7 12.57 91.14 30 5.66 Yes 17 0.76 No 0 0 No -29 0.92 Yes 41 96.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 605607 + NM_001286581 PHRF1 1 14.87 12.01 72 6.67 79.83 38 6.93 Yes 25 0.83 Yes 34 0.51 Yes -37 0.92 Yes 33 94.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 606444 + NM_001286581 PHRF1 1 1.11 1.08 40 -8.52 68.87 33 5.83 Yes 20 0.49 No 0 0 No -27 0.66 Yes 38 59.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 610508 + NM_001286581 PHRF1 1 0.28 0.21 14 2.35 0 11 4.12 No 16 0.58 No 0 0 No -28 0.95 Yes 42 94.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 610596 + NM_001286581 PHRF1 1 0.77 0.61 33 4.66 0 22 4.58 No 43 0.82 Yes 0 0 No -21 0.81 Yes 49 57.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 610666 + NM_001286581 PHRF1 1 0.17 0.14 10 3.64 75.49 24 5.48 No 67 -0.53 No 23 0.72 Yes -23 0.7 Yes 47 72.43 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 114242866 - NM_006608 PHTF1 1 62.99 18.14 72 10.42 86.92 32 6.84 Yes 69 0.46 No 31 0.81 Yes -31 0.88 Yes 39 81.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 114244444 - NM_006608 PHTF1 1 0.7 0.31 18 11.31 98.73 40 8.98 Yes 31 1.73 Yes 0 0 No -39 0.51 No 27 67.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 114249324 - NM_006608 PHTF1 1 0.41 0.17 10 6.2 86.56 24 4.09 No 11 0.26 No 0 0 No -23 0.73 Yes 47 84.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 114262549 - NM_006608 PHTF1 1 0.54 0.51 25 -1.16 58.75 55 7.09 Yes 50 1 Yes 0 0 No -54 0.74 Yes 16 73.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 114262552 - NM_006608 PHTF1 1 0.72 0.63 29 0.13 64.03 52 6.89 Yes 47 1 Yes 0 0 No -51 0.72 Yes 19 74.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 114268584 - NM_006608 PHTF1 1 5.35 3 68 2.88 0 28 4.42 No 15 1.53 Yes 27 0.91 Yes -27 0.77 Yes 43 78.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 114268588 - NM_006608 PHTF1 1 0.5 0.26 16 3.55 83.86 24 4.21 No 11 1.55 Yes 27 0.91 Yes -23 0.76 Yes 47 73.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 114269081 - NM_006608 PHTF1 1 0.31 0.31 18 6.34 84.45 37 6.39 Yes 24 0.79 Yes 23 0.49 Yes -36 0.75 Yes 34 79.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 114272846 - NM_006608 PHTF1 1 0.11 0.13 8 -7.2 70.75 35 8.41 Yes 22 0.65 No 0 0 No -34 0.66 No 36 79.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 114277570 - NM_006608 PHTF1 1 0.29 0.29 17 5.6 90.47 29 4.45 No 76 1.34 Yes 0 0 No -28 0.52 No 42 57.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 114285702 - NM_006608 PHTF1 1 0.5 0.38 20 2.91 69.98 17 5.42 No 4 0.1 No 0 0 No -25 0.76 Yes 54 69.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 114289637 - NM_006608 PHTF1 1 0.7 0.57 27 11.96 87.51 36 5.26 No 6 0.03 No 0 0 No -35 0.72 Yes 35 90.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 114292209 - NM_006608 PHTF1 1 1.25 0.82 36 -0.53 69.78 25 5.47 No 12 0.72 No 0 0 No -24 0.72 Yes 46 66.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 114292212 - NM_006608 PHTF1 1 25.02 17.13 72 8.87 88.31 22 5.23 No 9 0.71 No 21 0.66 Yes -21 0.71 Yes 49 71.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 114297026 - NM_006608 PHTF1 1 1.34 0.94 40 4.19 0 36 5.86 Yes 76 1.47 Yes 0 0 No -26 0.63 No 40 53.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 114297030 - NM_006608 PHTF1 1 0.19 0.15 9 1.5 84.41 32 5.6 Yes 72 1.48 Yes 0 0 No -22 0.6 No 44 58.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 114300706 - NM_006608 PHTF1 1 0.13 0.11 8 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -17 0.44 No 53 76.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 77477652 + NM_001127357 PHTF2 1 1.73 1.36 55 2.13 76.05 28 6.86 Yes 15 1.14 Yes 0 0 No -27 0.76 Yes 43 87.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 77484049 + NM_001127357 PHTF2 1 0.46 0.36 20 9.78 86.1 39 6.47 Yes NA NA NA 27 0.51 Yes -27 0.75 Yes 43 76.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 77522908 + NM_001127357 PHTF2 1 0.43 0.36 18 1.25 67.57 15 5.29 No 54 0.85 Yes 22 0.83 Yes -21 0.67 Yes 49 73.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 77537170 + NM_001127357 PHTF2 1 3.92 3.63 64 9.86 83.31 21 6.39 Yes 8 0.51 No 23 0.86 Yes -23 0.93 Yes 47 90.69 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 77538143 + NM_001127357 PHTF2 1 0.4 0.38 21 8.56 77.43 19 5.23 No 48 0.44 No 0 0 No -27 0.89 Yes 43 79.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 77558469 + NM_001127357 PHTF2 1 0.75 0.72 34 4.69 73.53 24 4.9 No 57 0.45 No 0 0 No -23 0.77 Yes 47 85.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 77569335 + NM_001127357 PHTF2 1 0.23 0.17 11 4.08 0 32 6.95 Yes 19 0.85 Yes 37 0.61 Yes -39 0.43 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 177635914 - NR_103508 PHYKPL 1 0.43 0.33 20 1.47 76.44 24 6.08 Yes 11 1.04 Yes 0 0 No -23 0.82 Yes 47 83.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 177641017 - NR_103508 PHYKPL 1 0.59 0.24 16 7.03 85.76 20 5.57 Yes 7 0.95 Yes 0 0 No -19 0.76 Yes 51 76.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 177642676 - NR_103508 PHYKPL 1 0.85 0.14 7 10.08 87.3 17 6.38 Yes 4 1.46 Yes 0 0 No -31 0.74 Yes 39 73.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 177658831 - NR_103508 PHYKPL 1 0.43 0.14 10 -2.47 55.89 26 5.29 No 55 0.42 No 25 0.95 Yes -25 0.91 Yes 45 56.27 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 177658868 - NR_103508 PHYKPL 1 1.38 0.42 18 4.87 70.77 31 6.78 Yes 18 0.44 No 30 0.88 Yes -30 0.88 Yes 40 86.53 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 99413795 + NM_018425 PI4K2A 1 0.59 0.35 23 7.05 81.7 40 6.63 Yes 27 0.3 No 0 0 No -40 0.44 No 30 69.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 99427719 + NM_018425 PI4K2A 1 0.35 0.22 13 9.39 91.71 36 4.91 No 3 0.26 No 0 0 No -27 0.86 Yes 43 76.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 25253960 + NR_144633 PI4K2B 1 0.68 0.67 29 1.31 82.6 17 4.57 No 32 0.51 No 0 0 No -25 0.6 No 45 57.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 25262149 + NR_144633 PI4K2B 1 0.11 0.44 24 0.16 0 31 5.86 Yes 18 0.95 Yes 0 0 No -30 0.86 Yes 40 93.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21063662 - NM_058004 PI4KA 1 0.11 0.13 9 -1.78 0 9 3.87 No 12 1.8 Yes 0 0 No -24 0.93 Yes 46 89.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21063788 - NM_058004 PI4KA 1 0.16 0.22 13 2.65 70.53 36 6.32 Yes 23 0.57 No 35 0.73 Yes -35 0.83 Yes 35 82.61 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 21067284 - NM_058004 PI4KA 1 0.4 0.29 16 -2.72 0 15 4.58 No 23 1.06 Yes 25 0.48 Yes -21 0.33 No 30 23.97 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 21088871 - NM_058004 PI4KA 1 0.19 0.18 10 10.72 90.94 28 5.39 No 64 1.06 Yes 21 0.9 Yes -27 0.79 Yes 43 89.23 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 21090880 - NM_058004 PI4KA 1 0.62 0.54 27 8.38 78.1 26 6.33 Yes 13 1.31 Yes 0 0 No -25 0.73 Yes 45 76.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21094822 - NM_058004 PI4KA 1 0.25 0.22 7 5.52 94.15 21 4.14 No 4 0.8 Yes 0 0 No -20 0.95 Yes 50 94.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21099444 - NM_058004 PI4KA 1 0.16 0.17 7 9.17 80.02 33 6.16 Yes 20 0.12 No 0 0 No -32 0.89 Yes 38 93.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 21103289 - NM_058004 PI4KA 1 0.47 0.43 24 10.81 90.93 27 5.39 No 14 0.91 Yes 0 0 No -26 0.61 No 44 87.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 21105315 - NM_058004 PI4KA 1 0.2 0.22 13 6.51 76.93 24 5.07 No 11 1.27 Yes 0 0 No -23 0.88 Yes 47 82.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21112239 - NM_058004 PI4KA 1 0.55 0.56 28 8.16 89.59 24 4.52 No 73 -3.15 No 0 0 No -23 0.76 Yes 47 82.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 21115690 - NM_058004 PI4KA 1 0.37 0.36 21 5.59 70.71 16 5.54 No 61 0.51 No 23 0.69 Yes -22 0.31 No 48 73.76 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 21119452 - NM_058004 PI4KA 1 0.29 0.31 15 6.01 81.7 26 5.47 No 13 1.47 Yes 0 0 No -25 0.89 Yes 45 90.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21158683 - NM_058004 PI4KA 1 0.15 0.14 8 -2.92 0 14 3.81 No 27 1.66 Yes 0 0 No -32 0.67 Yes 38 84.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21160416 - NM_058004 PI4KA 1 0.29 0.31 18 4.07 75.44 36 6.6 Yes 23 1.57 Yes 0 0 No -23 0.43 No 47 67.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 21173999 - NM_058004 PI4KA 1 0.23 0.35 17 6.78 81.74 23 6.35 Yes 10 1.29 Yes 0 0 No -25 0.51 No 44 52.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 21174153 - NM_058004 PI4KA 1 0.31 0.42 24 6.49 74.81 25 5.49 No 46 1.67 Yes 0 0 No -25 0.38 No 45 67.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 21178382 - NM_058004 PI4KA 1 0.14 0.11 8 7.27 86.75 38 7.03 Yes 25 1.28 Yes 0 0 No -41 0.73 Yes 29 74.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20385316 - NR_003563 PI4KAP1 1 2.14 0.61 31 2.65 70.53 36 6.32 Yes 23 0.57 No 0 0 No -35 0.74 Yes 35 74.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 21841265 - NR_003700 PI4KAP2 1 4.37 0.29 16 4.93 68.43 26 5.63 Yes 51 2.15 Yes 25 0.95 Yes -25 0.94 Yes 45 76.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 151265939 - NM_001330721 PI4KB 1 1.44 1.32 53 10.91 84.51 47 6.78 Yes 34 1.69 Yes 25 0.46 Yes -41 0.37 No 24 51.08 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 151267483 - NM_001330721 PI4KB 1 0.1 0.19 13 10.26 89.63 34 6.32 Yes 21 1.5 Yes 0 0 No -33 0.94 Yes 37 97.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151271391 - NM_001330721 PI4KB 1 0.26 0.42 25 5.96 93.65 32 6 Yes 19 0.47 No 0 0 No -31 0.56 No 39 86.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 151271436 - NM_001330721 PI4KB 1 0.19 0.31 18 7.09 84.69 33 5.8 Yes 9 0.02 No 0 0 No -32 0.43 No 49 50.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151271535 - NM_001330721 PI4KB 1 0.25 0.4 24 3.02 76.89 20 4.9 No 63 -0.62 No 0 0 No -19 0.65 No 51 78.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 151286292 - NM_001330721 PI4KB 1 0.89 0.18 11 5.17 79.1 38 6.73 Yes 25 0.5 No 0 0 No -33 0.55 No 37 60.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151298805 - NM_001330721 PI4KB 1 0.43 0.11 7 3.31 81.66 25 5.29 No 66 0.39 No 0 0 No -24 0.83 Yes 46 80.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 68347496 + NM_016166 PIAS1 1 0.75 0.51 29 9.34 81.42 26 6 Yes NA NA NA 0 0 No -24 0.66 Yes 41 77.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 68349817 + NM_016166 PIAS1 1 0.63 0.47 22 8.51 93.85 23 5.18 No 10 -2.28 No 22 0.85 Yes -20 0.69 Yes 50 73.67 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 68358482 + NM_016166 PIAS1 1 0.54 0.36 21 3.19 0 33 6.34 Yes 39 0.76 No 0 0 No -38 0.84 Yes 32 78.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 68380179 + NM_016166 PIAS1 1 1.06 1.56 54 4.92 72.9 27 5.66 Yes 35 0.84 Yes 26 0.43 Yes -29 0.38 No 41 49.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 68380182 + NM_016166 PIAS1 1 0.56 0.82 39 4.5 81.39 30 5.92 Yes 38 0.83 Yes 0 0 No -32 0.35 No 38 46.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 68439456 + NM_016166 PIAS1 1 0.17 0.26 10 5.72 75.51 30 6.12 Yes -2 0.41 No 0 0 No -30 0.86 Yes 40 84.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 68466153 + NM_016166 PIAS1 1 0.16 0.22 13 5.88 89.09 46 6.27 Yes 8 1.1 Yes 0 0 No -20 0.58 No 50 74.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 68473763 + NM_016166 PIAS1 1 0.08 0.11 8 10.16 87.92 22 6.26 Yes 52 0.69 No 21 0.64 Yes -21 0.38 No 49 38.1 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 44389716 - NM_001324049 PIAS2 1 0.17 0.13 7 6.16 88.76 30 6.62 Yes 17 1.19 Yes 0 0 No -29 0.69 Yes 41 76.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 44392550 - NM_001324049 PIAS2 1 3.25 2.24 60 5.83 72.26 33 5.91 Yes 41 0.6 No 0 0 No -32 0.63 No 45 54.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 44392579 - NM_001324049 PIAS2 1 5.03 3.47 70 4.16 82.09 25 6.24 Yes 56 0.86 Yes 27 0.9 Yes -24 0.95 Yes 46 96.96 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 44398411 - NM_001324049 PIAS2 1 31.84 22.65 72 7.51 89.5 46 6.93 Yes 33 0.91 Yes 24 0.43 Yes -21 0.48 No 49 33.73 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 44400953 - NM_001324049 PIAS2 1 0.41 0.29 17 7.96 81.59 31 5.77 Yes 18 1.06 Yes 0 0 No -30 0.77 Yes 40 79.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 44401243 - NM_001324049 PIAS2 1 0.35 0.24 14 7.34 85.22 52 7.27 Yes 39 0.33 No 0 0 No -26 0.73 Yes 44 59.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 44403033 - NM_001324049 PIAS2 1 0.39 0.31 20 11.12 88.27 32 6.16 Yes 60 0.98 Yes 0 0 No -31 0.89 Yes 39 82.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 44434000 - NM_001324049 PIAS2 1 0.52 0.56 28 5.69 72.63 30 6 Yes 17 0 No 0 0 No -29 0.78 Yes 41 83.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 145580940 + NM_006099 PIAS3 1 0.98 0.35 19 7.49 86.29 30 6.8 Yes 22 1.5 Yes 0 0 No -29 0.48 No 41 59.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 4010948 + NM_015897 PIAS4 1 0.45 0.21 14 9.21 87.69 13 4.63 No 23 -0.97 No 0 0 No -22 0.36 No 48 79.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 4012881 + NM_015897 PIAS4 1 0.3 0.13 8 5.96 79.47 22 4.9 No 37 -0.25 No 27 0.86 Yes -21 0.8 Yes 49 90.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 4012956 + NM_015897 PIAS4 1 0.35 0.17 10 4.94 84.59 17 4.79 No 51 1.24 Yes 0 0 No -24 0.78 Yes 46 83.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4033501 + NM_015897 PIAS4 1 0.45 0.25 12 11.46 90.61 21 4.52 No 66 -0.13 No 0 0 No -21 0.58 No 50 70.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 73367274 + NM_006346 PIBF1 1 1.82 0.97 42 10.26 77.99 28 5.1 No 0 1.03 Yes 0 0 No -27 0.9 Yes 43 94.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 73398338 + NM_006346 PIBF1 1 0.58 0.4 26 7.01 82.63 22 5.74 Yes 9 1.3 Yes 0 0 No -21 0.82 Yes 49 89.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 73421498 + NM_006346 PIBF1 1 3.05 1.69 56 4.47 90.04 24 4.9 No 64 0.14 No 0 0 No -23 0.59 No 48 50.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 73478599 + NM_006346 PIBF1 1 2.57 0.79 31 6.26 88.76 39 9.46 Yes 75 -2.42 No 0 0 No -38 0.49 No 32 64.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 73478602 + NM_006346 PIBF1 1 0.32 0.11 7 -4.76 86.92 42 9.59 Yes 45 -0.64 No 0 0 No -41 0.51 No 29 67.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 73489709 + NM_006346 PIBF1 1 1.32 0.65 31 7.85 74.94 29 6.67 Yes 43 1 Yes 0 0 No -28 0.69 Yes 42 63.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 73492090 + NM_006346 PIBF1 1 0.35 0.17 10 6.07 89.01 21 5.74 Yes 40 -3.97 No 0 0 No -20 0.9 Yes 50 90.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 73502622 + NM_006346 PIBF1 1 0.46 0.19 14 9.94 91.39 23 5.09 No 75 -2.82 No 0 0 No -27 0.67 Yes 43 66.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 73506758 + NM_006346 PIBF1 1 1.27 0.56 28 0.79 66.35 65 8.16 Yes 52 0.93 Yes 0 0 No -21 0.71 Yes 18 27.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 73513985 + NM_006346 PIBF1 1 1.68 0.82 34 10.72 89.03 30 6.47 Yes 17 1.65 Yes 0 0 No -29 0.93 Yes 41 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 85671821 - NM_001206947 PICALM 1 1.85 1.86 56 11.34 89.41 44 6.18 Yes 31 1.43 Yes 43 0.45 Yes -43 0.86 Yes 27 86.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 85682612 - NM_001206947 PICALM 1 0.19 0.21 11 7.61 86.16 20 7.62 Yes 7 1.28 Yes 0 0 No -19 0.82 Yes 51 90.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 85689137 - NM_001206947 PICALM 1 12.29 11.93 72 -0.12 61.26 24 6.73 Yes 11 0.69 No 23 0.78 Yes -46 0.63 No 24 59.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 85693011 - NM_001206947 PICALM 1 0.18 0.21 12 4 72.05 31 4.82 No 57 0.36 No 0 0 No -26 0.5 No 44 50.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 85693032 - NM_001206947 PICALM 1 65 64.29 72 3.76 71.61 24 4.87 No 36 0.36 No 33 0.84 Yes -48 0.76 Yes 22 93.35 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 85701422 - NM_001206947 PICALM 1 5.83 4.29 69 8.05 78.84 27 5.48 No 60 1.51 Yes 25 0.69 Yes -25 0.86 Yes 45 95.9 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 85701443 - NM_001206947 PICALM 1 156.49 112.51 72 3.93 78.67 52 9.59 Yes 39 1.51 Yes 30 0.73 Yes -51 0.6 No 19 84.02 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 85711817 - NM_001206947 PICALM 1 0.14 0.36 19 -2.69 0 11 3.87 No 17 0.17 No 0 0 No -29 0.92 Yes 41 85.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 85718623 - NM_001206947 PICALM 1 0.1 0.21 14 -1.89 0 77 6.71 Yes 64 1.12 Yes 0 0 No -25 0.47 No 41 45.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 85719071 - NM_001206947 PICALM 1 0.23 0.53 27 8.25 81.95 26 5.48 No 31 0.65 No 0 0 No -26 0.8 Yes 45 54.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 85720925 - NM_001206947 PICALM 1 0.07 0.15 9 1.53 64.4 32 5.95 Yes 32 -3.79 No 0 0 No -25 0.7 Yes 45 77.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 85722178 - NM_001206947 PICALM 1 0.12 0.19 13 -12.8 0 34 4.72 No 64 1 Yes 0 0 No -33 0.41 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 85722179 - NM_001206947 PICALM 1 0.07 0.15 8 -14.4 0 33 4.65 No 63 1 Yes 0 0 No -32 0.44 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 85731085 - NM_001206947 PICALM 1 0.15 0.29 16 5.89 88.79 22 4.69 No 9 0.53 No 0 0 No -21 0.7 Yes 49 68.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 85734585 - NM_001206947 PICALM 1 1.38 2.68 63 6.96 84.33 21 4.63 No 63 1.18 Yes 23 0.75 Yes -23 0.85 Yes 47 80.97 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38464078 + NM_001039584 PICK1 1 0.53 0.17 10 7.54 94.91 23 4.61 No 68 2.09 Yes 22 0.87 Yes -21 0.7 Yes 48 75.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38468440 + NM_001039584 PICK1 1 0.97 0.22 11 5.42 81.82 23 7.29 Yes NA NA NA 20 0.77 Yes -22 0.47 No 48 59.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 38469577 + NM_001039584 PICK1 1 0.81 0.24 12 7.38 87.74 24 5 No 11 0.74 No 0 0 No -23 0.84 Yes 47 63.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 38470875 + NM_001039584 PICK1 1 1.09 0.35 21 2.9 0 20 4.38 No 44 -0.38 No 0 0 No -32 0.9 Yes 38 91.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 38470890 + NM_001039584 PICK1 1 0.34 0.11 8 3.59 76.6 23 4.33 No 59 -0.38 No 0 0 No -47 0.69 Yes 48 49.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 801282 - NM_145887 PIDD1 1 0.99 0.68 29 8.39 81.52 25 5.57 Yes 12 0.73 No 0 0 No -28 0.79 Yes 42 90.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 802377 - NM_145887 PIDD1 1 0.74 0.72 27 5.42 76.61 27 5.32 No 36 2.53 Yes 26 0.93 Yes -26 0.65 No 44 89.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 802728 - NM_145887 PIDD1 1 0.86 0.31 16 10.49 89.2 33 5.66 Yes 20 0.82 Yes 0 0 No -23 0.56 No 47 69.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 802832 - NM_145887 PIDD1 1 0.26 0.14 7 6.96 73.19 22 5.66 Yes 67 -0.22 No 0 0 No -22 0.67 Yes 43 59.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 802855 - NM_145887 PIDD1 1 6.65 3.01 60 6.69 83.77 45 5.42 No 44 -0.23 No 0 0 No -39 0.3 No 37 32.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 803086 - NM_145887 PIDD1 1 10.2 5.21 60 6.48 87.19 22 4.75 No 27 1.23 Yes 0 0 No -39 0.7 Yes 50 76.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 803104 - NM_145887 PIDD1 1 1.37 0.75 29 9.41 92.4 22 5.2 No 9 1.22 Yes 0 0 No -21 0.82 Yes 49 77.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 803104 - NM_145887 PIDD1 1 0.26 0.1 7 9.41 92.4 22 5.2 No 9 1.22 Yes 0 0 No -21 0.82 Yes 49 77.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 803122 - NM_145887 PIDD1 1 0.26 0.15 9 -5.8 0 19 4.47 No 37 -0.08 No 0 0 No -18 0.51 No 21 44.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 803351 - NM_145887 PIDD1 1 0.58 0.22 12 9.61 81.31 40 5.74 Yes 1 1.89 Yes 0 0 No -39 0.39 No 31 48.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 803648 - NM_145887 PIDD1 1 23.38 14.01 71 6.69 86.46 25 5.29 No NA NA NA 24 0.83 Yes -21 0.76 Yes 49 80.96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 803667 - NM_145887 PIDD1 1 0.16 0.14 8 3.92 77.08 13 5.29 No NA NA NA 24 0.83 Yes -21 0.28 No 49 19.07 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 803972 - NM_145887 PIDD1 1 0.15 0.15 8 9.7 84.52 31 5.23 No 43 0.19 No 0 0 No -24 0.75 Yes 46 76.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88782169 - NM_001142864 PIEZO1 1 0.19 0.14 10 -11.12 67.67 34 5.94 Yes 21 0.05 No 0 0 No -33 0.88 Yes 37 38.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 88783128 - NM_001142864 PIEZO1 1 0.36 0.47 25 0.55 0 15 4.58 No 71 0.76 No 0 0 No -32 0.63 No 38 75.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 88784024 - NM_001142864 PIEZO1 1 7.19 5.99 71 6.42 80.41 37 7.58 Yes 24 0.75 No 25 0.88 Yes -34 0.52 No 36 61.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 88784217 - NM_001142864 PIEZO1 1 0.29 0.25 13 13.14 92.85 28 5.32 No 70 -2.42 No 27 0.78 Yes -27 0.88 Yes 43 84.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88786293 - NM_001142864 PIEZO1 1 1 1.08 44 7.8 80.42 34 6.24 Yes 21 0.26 No 0 0 No -27 0.81 Yes 43 69.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 88786652 - NM_001142864 PIEZO1 1 0.17 0.24 14 6.2 83.28 17 5.47 No 50 2.35 Yes 0 0 No -19 0.54 No 54 54.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 88786689 - NM_001142864 PIEZO1 1 1.11 1.24 51 -3.23 60.68 26 8.12 Yes 13 2.36 Yes 21 0.31 Yes -25 0.91 Yes 45 88.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 88786934 - NM_001142864 PIEZO1 1 0.39 0.5 25 0.08 0 14 3.99 No 12 1.23 Yes 0 0 No -24 0.82 Yes 46 82.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88787154 - NM_001142864 PIEZO1 1 1.48 1.32 48 -1.09 72.55 19 5 No 43 0.13 No 0 0 No -18 0.5 No 52 33.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 88787246 - NM_001142864 PIEZO1 1 0.44 0.4 22 8.53 82.96 26 4.64 No 33 1.15 Yes 0 0 No -23 0.46 No 25 56.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 88788082 - NM_001142864 PIEZO1 1 2.58 1.72 52 3.75 75.53 26 5.66 Yes 75 1.76 Yes 0 0 No -25 0.76 Yes 45 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88789557 - NM_001142864 PIEZO1 1 0.15 0.13 8 -11.47 72.83 23 4.81 No 10 1.37 Yes 0 0 No -22 0.94 Yes 48 91.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88791953 - NM_001142864 PIEZO1 1 0.14 0.14 9 4.11 71.09 9 7.36 Yes 46 -1.16 No 27 0.91 Yes -25 0.72 Yes 22 29.66 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 88793274 - NM_001142864 PIEZO1 1 0.15 0.15 7 -2.41 68.34 75 8.94 Yes 62 0.66 No 0 0 No -20 0.63 No 50 73.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 88793345 - NM_001142864 PIEZO1 1 0.12 0.11 7 1.37 72.34 12 4.53 No 27 1.24 Yes 0 0 No -39 0.35 No 59 45.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 88799127 - NM_001142864 PIEZO1 1 0.35 0.42 23 6.59 81.5 17 4.8 No 21 2.11 Yes 0 0 No -16 0.38 No 37 77.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 88800459 - NM_001142864 PIEZO1 1 2.32 2.18 60 2.39 0 27 6.16 Yes 40 -2.4 No 0 0 No -26 0.78 Yes 46 82.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88800836 - NM_001142864 PIEZO1 1 0.36 0.47 23 6.27 87.26 11 5.1 No 71 -0.21 No 0 0 No -19 0.75 Yes 51 91.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88801111 - NM_001142864 PIEZO1 1 0.4 0.58 30 5.83 84.36 22 6.05 Yes 9 1.29 Yes 0 0 No -21 0.97 Yes 49 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88801196 - NM_001142864 PIEZO1 1 0.58 0.78 32 -0.51 0 21 4.47 No 22 1.57 Yes 0 0 No -20 0.75 Yes 36 87.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88804039 - NM_001142864 PIEZO1 1 0.25 0.22 11 4.4 74.49 21 5 No 22 0.87 Yes 0 0 No -20 0.51 No 50 56.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 88818722 - NM_001142864 PIEZO1 1 0.3 0.14 7 6.71 81.28 21 7.2 Yes 8 1.04 Yes 0 0 No -20 0.87 Yes 50 94.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88831132 - NM_001142864 PIEZO1 1 0.89 0.42 21 5.15 90.14 28 4.94 No 3 0.79 Yes 0 0 No -27 0.66 No 43 49.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 10677101 - NM_022068 PIEZO2 1 0.09 0.11 7 6.14 95.42 22 4.9 No 9 0.13 No 0 0 No -21 0.93 Yes 49 78.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 10718974 - NM_022068 PIEZO2 1 0.19 0.22 10 7.55 86.79 59 4.39 No 46 0.84 Yes 0 0 No -27 0.3 No 43 41.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 10729615 - NM_022068 PIEZO2 1 0.97 0.49 24 3.01 0 48 7.68 Yes 35 1.26 Yes 0 0 No -47 0.89 Yes 23 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 10731034 - NM_022068 PIEZO2 1 0.65 0.57 26 2.09 66.82 24 4.96 No 11 0.17 No 0 0 No -23 0.91 Yes 47 93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 10735329 - NM_022068 PIEZO2 1 2.39 2.46 46 9.61 82.24 29 7.15 Yes 16 1.32 Yes 0 0 No -28 0.85 Yes 42 77.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 10746463 - NM_022068 PIEZO2 1 0.63 0.22 11 6.98 83.1 25 5.2 No 12 0.21 No 0 0 No -24 0.75 Yes 46 66.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 10780365 - NM_022068 PIEZO2 1 1 1.26 43 6.17 71.83 71 8.66 Yes 58 2.01 Yes 35 0.75 Yes -35 0.87 Yes 35 92.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 10796197 - NM_022068 PIEZO2 1 0.11 0.1 7 8.16 85.86 24 7.42 Yes 11 1.48 Yes 0 0 No -23 0.94 Yes 47 95.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 10844000 - NM_022068 PIEZO2 1 3.22 2.92 56 5.26 85.24 15 4.96 No 74 0.98 Yes 0 0 No -22 0.69 Yes 48 68.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 10848228 - NM_022068 PIEZO2 1 0.32 0.18 10 7.47 82.96 32 4.86 No 11 0.5 No 0 0 No -23 0.87 Yes 47 85.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 10902811 - NM_022068 PIEZO2 1 0.12 0.15 9 10.12 92.19 68 8.17 Yes 55 1.42 Yes 0 0 No -24 0.68 Yes 18 53.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 10910016 - NM_022068 PIEZO2 1 0.21 0.14 8 7.34 83.25 36 5.61 Yes 59 -3.14 No 0 0 No -23 0.35 No 47 29.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 11030798 - NM_022068 PIEZO2 1 0.49 0.69 24 7.6 88.4 20 5.46 No 7 0.29 No 0 0 No -26 0.87 Yes 44 93.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 11043970 - NM_022068 PIEZO2 1 0.63 0.49 26 1.2 68.65 29 6.06 Yes 42 0.89 Yes 0 0 No -28 0.94 Yes 42 95.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 11137819 - NM_022068 PIEZO2 1 0.34 0.21 13 6.42 73.23 32 6.88 Yes 44 -2.16 No 0 0 No -35 0.4 No 39 64.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 11141753 - NM_022068 PIEZO2 1 0.2 0.15 11 6.51 79.31 21 6.55 Yes 8 1.42 Yes 0 0 No -26 0.6 No 44 68.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 11145932 - NM_022068 PIEZO2 1 4.72 2.63 51 9.1 79.72 33 6.24 Yes 20 0.89 Yes 0 0 No -32 0.9 Yes 38 94.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65112219 - NM_001286497 PIF1 1 33.8 8.32 71 7.68 83.76 41 6.72 Yes 47 1.73 Yes 27 0.62 Yes -27 0.57 No 30 63.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 65113597 - NM_001286497 PIF1 1 2.14 0.28 14 -4.53 0 25 5.26 No 34 -1.96 No 0 0 No -24 0.84 Yes 46 52.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 65113693 - NM_001286497 PIF1 1 1.07 0.13 8 -2.41 0 18 4.36 No 5 0.23 No 33 0.1 Yes -17 0.85 Yes 53 40.07 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 65113708 - NM_001286497 PIF1 1 0.69 0.11 8 -1.91 0 17 4.54 No 4 0.13 No 0 0 No -16 0.78 Yes 54 70.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 65114332 - NM_001286497 PIF1 1 13.54 1.54 47 4.2 70.65 25 7.46 Yes 46 -2.03 No 0 0 No -24 0.96 Yes 46 94.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 65114537 - NM_001286497 PIF1 1 0.71 0.14 10 6.4 85.32 32 5.35 No 59 1.75 Yes 0 0 No -31 0.73 Yes 39 75.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65114585 - NM_001286497 PIF1 1 0.96 0.25 15 0.19 0 9 3.87 No 11 1.74 Yes 0 0 No -23 0.75 Yes 47 84.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 15346436 - NM_002641 PIGA 1 7.01 0.83 35 7.57 90.05 25 5.63 Yes 38 2.14 Yes 0 0 No -24 0.43 No 46 66.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 55611831 + NM_004855 PIGB 1 1.75 0.36 23 6.1 85.92 41 9.07 Yes 49 1.04 Yes 26 0.62 Yes -26 0.49 No 35 50.07 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 55616977 + NM_004855 PIGB 1 0.99 0.28 18 6.47 83.98 25 6.31 Yes 12 1.02 Yes 24 0.76 Yes -24 0.87 Yes 46 80.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 55613474 + NM_004855 PIGB 1 0.58 0.21 14 -1.67 0 23 6.15 Yes 69 0.21 No 28 0.91 Yes -15 0.46 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 55616555 + NM_004855 PIGB 1 1.01 0.33 20 6.23 83.15 28 5.98 Yes 15 1.5 Yes 0 0 No -27 0.82 Yes 43 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 55616977 + NM_004855 PIGB 1 3.48 1.01 39 6.47 83.98 25 6.31 Yes 12 1.02 Yes 24 0.76 Yes -24 0.87 Yes 46 80.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 55619676 + NM_004855 PIGB 1 0.51 0.14 9 5.4 77.99 19 5.8 Yes 6 1.32 Yes 0 0 No -27 0.74 Yes 43 61.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 55622033 + NM_004855 PIGB 1 0.31 0.1 7 7.07 80.09 35 6.78 Yes 22 1.04 Yes 0 0 No -34 0.87 Yes 36 94.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 55631060 + NM_004855 PIGB 1 1.25 0.22 13 7.23 76.02 29 6.32 Yes 16 1.28 Yes 0 0 No -28 0.75 Yes 42 87.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 55632854 + NM_004855 PIGB 1 2.28 0.74 32 4.24 78.75 33 6.63 Yes 69 2.18 Yes 0 0 No -32 0.65 No 38 73.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 55632963 + NM_004855 PIGB 1 1.01 0.29 16 2.6 69.28 34 6.76 Yes 17 1.5 Yes 0 0 No -33 0.86 Yes 37 83.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 55635703 + NM_004855 PIGB 1 1.27 0.5 29 5.62 80.25 32 6.42 Yes 19 1.07 Yes 0 0 No -32 0.67 Yes 39 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 172411994 - NM_153747 PIGC 1 0.8 0.24 15 7.03 74.44 21 6.15 Yes 31 0.8 Yes 20 0.71 Yes -27 0.54 No 43 80.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 46815266 - NM_173074 PIGF 1 14.97 2.04 58 8.41 87.14 26 5.48 No 67 0.07 No 0 0 No -25 0.95 Yes 45 96.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 46818912 - NM_173074 PIGF 1 1.09 0.14 10 9.11 85.27 28 5.31 No 15 0.63 No 0 0 No -27 0.69 Yes 43 70.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 46819065 - NM_173074 PIGF 1 39 4.93 71 5.19 73.14 36 8.88 Yes 72 0.58 No 23 0.76 Yes -23 0.62 No 43 34.99 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 46824445 - NM_173074 PIGF 1 0.81 0.89 42 8.48 87.5 31 6.08 Yes 18 1.12 Yes 0 0 No -30 0.84 Yes 40 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 46842321 - NM_173074 PIGF 1 3.19 2.58 62 -0.23 0 40 7.28 Yes 74 1.24 Yes 0 0 No -34 0.72 Yes 36 83.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 494889 + NM_001289051 PIGG 1 5.31 3.24 68 8.69 84.9 27 6.5 Yes 14 0.9 Yes 26 0.78 Yes -26 0.57 No 37 55.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 495385 + NM_001289051 PIGG 1 0.26 0.15 10 -1.55 0 20 4.56 No 71 1.27 Yes 23 0.81 Yes -19 0.81 Yes 47 81.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 500586 + NM_001289051 PIGG 1 0.21 0.13 8 10.33 91.45 27 4.29 No 54 1.26 Yes 0 0 No -23 0.75 Yes 47 82.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 510127 + NM_001289051 PIGG 1 0.95 0.43 25 8.34 83.56 28 4.48 No 15 0.48 No 0 0 No -27 0.43 No 45 63.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 515777 + NM_001289051 PIGG 1 0.85 0.39 18 4.7 88.62 20 4.69 No 7 1.17 Yes 19 0.91 Yes -19 0.92 Yes 51 93.79 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 515796 + NM_001289051 PIGG 1 0.36 0.14 9 6.64 96.58 22 5.29 No 26 1.17 Yes 21 0.88 Yes -21 0.89 Yes 49 93.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 515815 + NM_001289051 PIGG 1 0.48 0.22 14 7.28 89 27 4.95 No 45 1.17 Yes 26 0.77 Yes -21 0.78 Yes 49 70.56 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 518959 + NM_001289051 PIGG 1 2.44 0.85 37 7.48 80.73 55 6.04 Yes 42 0.75 No 0 0 No -31 0.51 No 39 73.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 525081 + NM_001289051 PIGG 1 0.52 0.19 10 2.3 74.18 24 5.1 No 11 1.05 Yes 0 0 No -23 0.95 Yes 47 86.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 530144 + NM_001289051 PIGG 1 1.39 0.57 27 10.8 93.71 24 5.47 No 11 0.82 Yes 0 0 No -23 0.81 Yes 47 78.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68059154 - NM_004569 PIGH 1 1.83 0.93 41 8.13 87.07 24 6.25 Yes 11 0.77 Yes 23 0.89 Yes -23 0.94 Yes 47 95.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 68059433 - NM_004569 PIGH 1 2.78 1.44 57 3.48 90.66 20 4.82 No 7 0.21 No 31 0.72 Yes -34 0.72 Yes 36 93.56 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 68060665 - NM_004569 PIGH 1 5.68 2.64 66 1.83 0 38 7.22 Yes 25 1.46 Yes 27 0.91 Yes -32 0.86 Yes 38 80.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 77585503 - NM_005482 PIGK 1 0.16 0.26 16 7.25 86.01 35 5.91 Yes 44 0.8 Yes 0 0 No -34 0.4 No 45 50.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 77593502 - NM_005482 PIGK 1 0.49 0.56 26 9.54 83.95 29 6.3 Yes 58 0.89 Yes 0 0 No -28 0.75 Yes 42 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 77612479 - NM_005482 PIGK 1 0.23 0.25 15 10.43 88.27 28 7.21 Yes 15 1.58 Yes 0 0 No -27 0.94 Yes 43 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 77620301 - NM_005482 PIGK 1 0.11 0.1 7 5.35 0 9 3.87 No 70 -3.97 No 0 0 No -26 0.88 Yes 44 78.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 77626254 - NM_005482 PIGK 1 0.21 0.24 15 -9.6 67.64 40 6.23 Yes 49 1.52 Yes 0 0 No -35 0.87 Yes 35 87.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 77627418 - NM_005482 PIGK 1 0.12 0.13 7 0.98 70.42 26 3.93 No 72 -5.3 No 25 0.8 Yes -21 0.87 Yes 49 84.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 77635058 - NM_005482 PIGK 1 0.44 0.46 29 7.36 83.04 22 5.66 Yes 61 1.12 Yes 0 0 No -43 0.45 No 49 67.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 77646652 - NM_005482 PIGK 1 0.11 0.13 8 11.41 90.94 26 5.39 No 69 0.2 No 0 0 No -25 0.65 No 46 64.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 77655906 - NM_005482 PIGK 1 1.1 1.11 45 6.69 87 33 6.63 Yes 20 1.44 Yes 0 0 No -32 0.84 Yes 38 92.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 77675752 - NM_005482 PIGK 1 0.12 0.14 7 7.84 78.58 23 5.91 Yes 56 1.17 Yes 0 0 No -22 0.94 Yes 48 95.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 77678033 - NM_005482 PIGK 1 1.25 0.69 32 8.09 82.92 21 5.46 No 67 1.19 Yes 0 0 No -29 0.69 Yes 41 65.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 77684009 - NM_005482 PIGK 1 0.27 0.14 8 11.68 86.87 22 6.22 Yes 72 1.95 Yes 0 0 No -21 0.58 No 46 60.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 16120861 + NM_004278 PIGL 1 27.95 5.57 67 3.4 75.52 25 3.54 No 16 1.9 Yes 28 0.83 Yes -19 0.75 Yes 42 69.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 16120871 + NM_004278 PIGL 1 0.98 0.17 9 3.37 0 14 4.36 No 26 1.87 Yes 0 0 No -29 0.83 Yes 41 86.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16204603 + NM_004278 PIGL 1 6.86 0.42 21 3.14 0 32 7.93 Yes 19 1.57 Yes 0 0 No -31 0.92 Yes 39 93.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16217225 + NM_004278 PIGL 1 1.9 0.21 12 9.17 87.49 31 7.17 Yes 18 1.29 Yes 0 0 No -30 0.71 Yes 40 70.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59720191 - NM_176787 PIGN 1 5.92 3.36 67 7.24 85.52 21 5.99 Yes 47 1.04 Yes 0 0 No -36 0.75 Yes 50 44.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 59724078 - NM_176787 PIGN 1 0.48 0.29 15 7.07 84.5 22 5.99 Yes 9 1.44 Yes 0 0 No -21 0.91 Yes 49 90.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59737683 - NM_176787 PIGN 1 0.55 0.29 17 10.08 75.45 27 6.65 Yes 47 -1.63 No 0 0 No -26 0.92 Yes 44 92.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 59737740 - NM_176787 PIGN 1 1.83 1.06 45 6.39 79.92 33 7.33 Yes 20 0.81 Yes 0 0 No -32 0.73 Yes 38 78.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59747618 - NM_176787 PIGN 1 0.18 0.11 7 2 65.16 15 5.09 No 65 -6.17 No 0 0 No -23 0.53 No 47 40.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 59749940 - NM_176787 PIGN 1 0.24 0.21 10 6.13 73.93 35 6.77 Yes 22 0.87 Yes 34 0.75 Yes -34 0.91 Yes 36 93.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 59764998 - NM_176787 PIGN 1 0.5 0.26 16 7.41 84.69 23 4.28 No 25 0.95 Yes 0 0 No -22 0.83 Yes 48 88.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59774060 - NM_176787 PIGN 1 0.14 0.11 7 7.49 86.09 50 6.95 Yes 1 0.99 Yes 0 0 No -25 0.95 Yes 45 93.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59774337 - NM_176787 PIGN 1 0.19 0.11 7 2.64 65.15 19 7.12 Yes 6 0.06 No 24 0.9 Yes -23 0.62 No 52 48.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 59774820 - NM_176787 PIGN 1 0.29 0.18 11 3.42 0 31 6.51 Yes 18 1.11 Yes 30 0.72 Yes -30 0.83 Yes 40 81.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 59781939 - NM_176787 PIGN 1 0.47 0.32 18 5.9 83.68 56 5.97 Yes 17 0.92 Yes 0 0 No -29 0.75 Yes 41 77.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59782148 - NM_176787 PIGN 1 0.15 0.1 7 0.08 76.77 20 4.76 No 46 0.29 No 0 0 No -19 0.88 Yes 51 80 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 59785891 - NM_176787 PIGN 1 0.73 0.49 25 14.19 89.81 39 8.36 Yes 6 0.31 No 18 0.4 Yes -26 0.47 No 44 61.3 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 59790778 - NM_176787 PIGN 1 2.03 1.33 49 8.85 78.83 26 6.4 Yes 31 1.77 Yes 25 0.87 Yes -25 0.94 Yes 45 95.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 59798864 - NM_176787 PIGN 1 0.44 0.25 12 6.12 76.86 29 5.82 Yes 45 0.84 Yes 0 0 No -25 0.32 No 45 36.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 59804346 - NM_176787 PIGN 1 1.38 0.93 34 8.6 79.38 32 6.83 Yes 19 1.45 Yes 0 0 No -31 0.91 Yes 39 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 59815487 - NM_176787 PIGN 1 1.81 1.35 52 7.36 79.23 12 5.48 No -1 0.61 No 23 0.25 Yes -23 0.5 No 47 63.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 59828460 - NM_176787 PIGN 1 0.64 0.14 10 5.45 85.38 32 5.51 No 19 1.36 Yes 24 0.88 Yes -24 0.67 Yes 46 59.98 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 59828460 - NM_176787 PIGN 1 2 0.43 24 5.45 85.38 32 5.51 No 19 1.36 Yes 24 0.88 Yes -24 0.67 Yes 46 59.98 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr18 59829746 - NM_176787 PIGN 1 3.55 0.63 31 6.32 86.64 38 4.71 No 72 1.29 Yes 23 0.76 Yes -23 0.59 No 33 60.32 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 59834289 - NM_176787 PIGN 1 0.7 0.13 8 10.36 90.28 36 6.83 Yes 23 1.01 Yes 0 0 No -24 0.65 No 46 56.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 35089526 - NM_152850 PIGO 1 0.63 0.21 13 10.38 94.89 35 8.12 Yes 58 1.9 Yes 0 0 No -34 0.65 No 36 88.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 35090275 - NM_152850 PIGO 1 2.36 0.97 36 -4.07 0 10 4 No 19 0.38 No 0 0 No -31 0.63 No 45 55.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 35090282 - NM_152850 PIGO 1 2.48 1.04 44 -2.35 78.92 25 5.1 No 12 0.39 No 24 0.91 Yes -24 0.84 Yes 46 64.85 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr9 35090647 - NM_152850 PIGO 1 0.19 0.1 7 6.65 81.32 16 5.47 No 34 1.29 Yes 0 0 No -47 0.57 No 23 76.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 35091531 - NM_152850 PIGO 1 2.42 0.46 26 11.55 87.6 14 5.66 Yes 1 1.59 Yes 0 0 No -22 0.54 No 48 57.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 35095974 - NM_152850 PIGO 1 1.07 0.26 17 5.53 86.17 30 6.94 Yes 76 0.71 No 29 0.87 Yes -29 0.87 Yes 41 90.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr21 38438380 - NM_153682 PIGP 1 0.11 0.14 8 3.97 83.86 62 8.89 Yes 49 2.63 Yes 0 0 No -27 0.42 No 43 49.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 38439637 - NM_153682 PIGP 1 0.14 0.18 10 5.09 79.04 27 6.48 Yes 14 0.82 Yes 0 0 No -26 0.64 No 44 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 38444611 - NM_153682 PIGP 1 10.79 10.04 72 8.65 80.84 29 7.56 Yes 16 1.29 Yes 28 0.83 Yes -28 0.5 No 35 55.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 620647 + NM_004204 PIGQ 1 1.08 0.17 10 3.07 81.99 17 6.93 Yes 4 1.19 Yes 27 0.36 Yes -16 0.35 No 54 51.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 629126 + NM_004204 PIGQ 1 0.58 0.24 16 -2 63.24 26 5.9 Yes 13 0.99 Yes 0 0 No -25 0.97 Yes 45 96.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 630750 + NM_004204 PIGQ 1 0.31 0.1 7 9.25 88.26 26 5.66 Yes 13 0.24 No 0 0 No -25 0.94 Yes 45 96.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 631198 + NM_004204 PIGQ 1 2.98 0.6 33 4.38 79.98 22 4.7 No 1 0.62 No 21 0.95 Yes -21 0.91 Yes 49 76.45 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 632483 + NM_004204 PIGQ 1 1.29 0.33 17 11.17 86.2 43 5.88 Yes -4 0.65 No 22 0.67 Yes -29 0.53 No 48 37.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 632483 + NM_004204 PIGQ 1 1.07 0.28 16 11.17 86.2 43 5.88 Yes -4 0.65 No 22 0.67 Yes -29 0.53 No 48 37.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 26885316 - NM_033198 PIGS 1 0.48 0.85 35 -0.65 0 31 6.08 Yes 18 0.59 No 0 0 No -30 0.9 Yes 40 87.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 26888894 - NM_033198 PIGS 1 0.2 0.32 20 4.29 76.92 26 5.65 Yes 13 1.12 Yes 0 0 No -25 0.87 Yes 45 75.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26888932 - NM_033198 PIGS 1 0.15 0.28 18 6.64 88.04 21 6.24 Yes 76 0.38 No 0 0 No -32 0.65 No 38 86.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 26890535 - NM_033198 PIGS 1 0.33 0.56 30 -7.77 0 9 3.87 No 66 -0.82 No 0 0 No -27 0.62 No 43 78.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 26890539 - NM_033198 PIGS 1 0.23 0.42 22 -0.71 79.47 21 7.62 Yes 62 -0.81 No 0 0 No -23 0.73 Yes 47 77.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 44048147 + NM_015937 PIGT 1 0.1 0.13 8 5.55 0 26 6.62 Yes 13 0.65 No 0 0 No -25 0.87 Yes 45 68.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 44047411 + NM_015937 PIGT 1 0.2 0.18 10 8 81.67 26 5 No 20 0.36 No 0 0 No -25 0.44 No 52 40.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 44048112 + NM_015937 PIGT 1 0.94 1.25 46 2.67 0 21 3.47 No 62 -2.66 No 20 0.58 Yes -20 0.77 Yes 50 70.81 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 44048147 + NM_015937 PIGT 1 0.48 0.65 29 5.55 0 26 6.62 Yes 13 0.65 No 0 0 No -25 0.87 Yes 45 68.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 44049147 + NM_015937 PIGT 1 1.79 2.61 61 7.66 78.41 23 5.78 Yes 63 -1.97 No 22 0.91 Yes -27 0.53 No 44 76.56 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr20 33159852 - NM_080476 PIGU 1 0.15 0.13 7 6.49 84.06 32 5.62 Yes 55 -3.82 No 0 0 No -22 0.5 No 52 51.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33167198 - NM_080476 PIGU 1 0.78 0.53 26 10.86 89.06 23 6.65 Yes 30 2 Yes 22 0.84 Yes -22 0.71 Yes 48 86.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 33173285 - NM_080476 PIGU 1 0.45 0.31 15 10.91 83.16 28 5.83 Yes 69 0.81 Yes 27 0.85 Yes -27 0.92 Yes 43 92.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 33176293 - NM_080476 PIGU 1 0.46 0.28 17 10.71 88.32 30 6.3 Yes 17 1.5 Yes 0 0 No -29 0.73 Yes 41 84.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33180673 - NM_080476 PIGU 1 0.56 0.39 20 2.02 71.13 37 8.89 Yes 24 0.97 Yes 0 0 No -36 0.69 Yes 34 67.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 33191089 - NM_080476 PIGU 1 0.99 0.63 29 7.86 78.47 38 6.08 Yes 53 -2.95 No 0 0 No -27 0.67 Yes 43 70.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33201741 - NM_080476 PIGU 1 0.57 0.35 17 5.39 83.4 24 5.2 No 63 0.14 No 0 0 No -23 0.63 No 47 61.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33202422 - NM_080476 PIGU 1 0.2 0.13 8 2.06 0 36 6.16 Yes 23 1.09 Yes 0 0 No -35 0.77 Yes 35 84.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33211321 - NM_080476 PIGU 1 0.3 0.26 14 10.45 87.91 18 5.25 No 5 1.21 Yes 0 0 No -18 0.34 No 52 42.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 33218759 - NM_080476 PIGU 1 0.26 0.24 13 8.8 82.25 23 8 Yes 10 1.38 Yes 0 0 No -22 0.51 No 36 58.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 33231986 - NM_080476 PIGU 1 0.67 0.51 29 7.4 87.35 39 6.16 Yes 18 1.75 Yes 0 0 No -30 0.88 Yes 40 83.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27122370 + NM_001202554 PIGV 1 3.45 1.01 49 9.84 86.91 27 3.71 No 39 0.59 No 0 0 No -26 0.65 No 44 71.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 27124105 + NM_001202554 PIGV 1 0.66 0.21 15 6.89 78.56 47 7.06 Yes 34 1.21 Yes 0 0 No -46 0.51 No 24 70.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 196444679 + NM_001166304 PIGX 1 1.33 1.17 42 5.57 82.92 22 4.7 No 9 0.75 No 21 0.74 Yes -21 0.52 No 49 54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 196447104 + NM_001166304 PIGX 1 0.22 0.18 10 8.83 82.44 25 5.93 Yes 12 1.48 Yes 0 0 No -25 0.51 No 49 52.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 196448047 + NM_001166304 PIGX 1 0.99 0.83 35 12.74 88.6 36 4.97 No 38 0.53 No 35 0.78 Yes -35 0.64 No 35 82.05 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 196448200 + NM_001166304 PIGX 1 0.27 0.21 12 8.98 91.59 17 5.41 No 4 1.8 Yes 0 0 No -20 0.68 Yes 45 57.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 196449287 + NM_001166304 PIGX 1 0.14 0.1 7 -7.93 75.42 36 5.13 No 65 0.3 No 0 0 No -26 0.9 Yes 44 88.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196453525 + NM_001166304 PIGX 1 2.99 3.76 68 6.32 92.56 18 5.74 Yes 5 0.61 No 24 0.26 Yes -23 0.51 No 47 54.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 196454797 + NM_001166304 PIGX 1 0.2 0.25 14 -0.23 0 28 8.71 Yes 34 1.08 Yes 0 0 No -27 0.67 Yes 43 63.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 49949853 - NM_017916 PIH1D1 1 2.12 2.72 64 7.55 82.06 27 3.86 No 2 0.47 No 26 0.76 Yes -26 0.89 Yes 44 82.88 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 49950002 - NM_017916 PIH1D1 1 0.18 0.21 12 4.93 80.43 22 5.28 No 71 1.09 Yes 21 0.75 Yes -21 0.75 Yes 49 66.99 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 49950052 - NM_017916 PIH1D1 1 1.17 1.39 48 -3.41 0 34 6.92 Yes 21 1.11 Yes 33 0.81 Yes -34 0.59 No 36 57.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 49950675 - NM_017916 PIH1D1 1 0.65 1.01 42 4.07 78.47 22 4.87 No 74 1.09 Yes 18 0.48 Yes -21 0.95 Yes 49 75.23 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 49950678 - NM_017916 PIH1D1 1 1.09 1.78 56 6.15 80.69 19 4.68 No 71 1.1 Yes 18 0.48 Yes -18 0.92 Yes 52 85.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 49951317 - NM_017916 PIH1D1 1 0.9 1.46 45 1.37 75.16 25 6.93 Yes 12 1.91 Yes 23 0.58 Yes -24 0.95 Yes 46 94.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 49952282 - NM_017916 PIH1D1 1 0.19 0.29 19 5.24 80.12 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.73 Yes 51 86.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49954197 - NM_017916 PIH1D1 1 5.54 7.76 72 9.38 77.91 30 6.39 Yes 17 1.01 Yes 29 0.87 Yes -29 0.58 No 41 70.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 98383286 - NM_152309 PIK3AP1 1 0.08 0.21 10 2.64 0 14 4.14 No 35 0.69 No 0 0 No -33 0.59 No 37 63.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 98383294 - NM_152309 PIK3AP1 1 0.07 0.13 8 -13.52 0 26 5.38 No 27 0.71 No 0 0 No -25 0.68 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 98424663 - NM_152309 PIK3AP1 1 0.1 0.11 8 6.67 85.08 28 4.28 No 54 0.82 Yes 0 0 No -20 0.62 No 43 62.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 98429381 - NM_152309 PIK3AP1 1 2.21 1.81 49 4.66 80.12 21 5.66 Yes 8 1.06 Yes 32 0.53 Yes -20 0.77 Yes 50 89.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 98462252 - NM_152309 PIK3AP1 1 1.73 1.32 44 3.87 84.41 24 4.37 No 18 1.03 Yes 0 0 No -30 0.73 Yes 40 77.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 98463494 - NM_152309 PIK3AP1 1 0.2 0.17 7 1.17 69.49 25 4.79 No 21 -3.02 No 0 0 No -24 0.69 Yes 42 71.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 98467545 - NM_152309 PIK3AP1 1 0.4 0.31 17 7.56 84.08 38 6.36 Yes 10 0.59 No 0 0 No -33 0.6 No 37 89.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 98478451 - NM_152309 PIK3AP1 1 1.15 0.43 25 11.32 89.12 32 6.16 Yes 19 0.38 No 0 0 No -31 0.88 Yes 39 78.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 17113198 - NM_001321380 PIK3C2A 1 0.18 0.14 10 2.87 0 9 3.87 No 51 -3.31 No 0 0 No -32 0.37 No 38 58.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 17120304 - NM_001321380 PIK3C2A 1 0.13 0.11 8 8.99 86.77 43 7.02 Yes 30 1.85 Yes 0 0 No -42 0.95 Yes 28 95.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 17140231 - NM_001321380 PIK3C2A 1 0.38 0.21 11 5.46 95 25 5.28 No 70 1.24 Yes 0 0 No -24 0.92 Yes 46 91.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 17150936 - NM_001321380 PIK3C2A 1 0.75 0.51 23 3.11 71.14 30 5.68 Yes 17 1.08 Yes 0 0 No -29 0.88 Yes 41 95.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 17156504 - NM_001321380 PIK3C2A 1 0.53 0.44 24 4.17 84.01 27 5.28 No 68 -6.08 No 0 0 No -26 0.84 Yes 44 74.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 17156504 - NM_001321380 PIK3C2A 1 0.17 0.14 9 4.17 84.01 27 5.28 No 68 -6.08 No 0 0 No -26 0.84 Yes 44 74.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 17167082 - NM_001321380 PIK3C2A 1 0.33 0.26 18 2.96 76.8 31 5.87 Yes 36 0.13 No 0 0 No -25 0.47 No 45 58.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 17171749 - NM_001321380 PIK3C2A 1 0.36 0.18 9 7.47 89.84 44 7.1 Yes 31 0.87 Yes 0 0 No -43 0.33 No 38 45.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 204401463 - NM_002646 PIK3C2B 1 0.64 0.42 21 3.65 71.56 28 6.22 Yes 15 0.45 No 0 0 No -27 0.84 Yes 43 87.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 204409477 - NM_002646 PIK3C2B 1 0.96 0.39 22 -13.56 0 17 4.29 No 44 -5.04 No 27 0.57 Yes -12 0.51 No 54 36.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 204416152 - NM_002646 PIK3C2B 1 1.5 0.69 33 7.29 74.6 42 5.79 Yes 51 1.87 Yes 0 0 No -41 0.35 No 31 55.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 204428611 - NM_002646 PIK3C2B 1 0.25 0.11 8 6.98 87.98 28 5.66 Yes 66 -1.91 No 0 0 No -27 0.92 Yes 43 80.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 204429066 - NM_002646 PIK3C2B 1 1.71 0.86 38 1.37 0 42 8.14 Yes 29 1.32 Yes 0 0 No -44 0.64 No 26 90.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 204448262 - NM_002646 PIK3C2B 1 4.67 0.26 15 5.02 78.23 38 6.55 Yes 44 -2.04 No 0 0 No -40 0.66 No 32 68.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 39564908 + NM_001308020 PIK3C3 1 2.44 3.04 66 5.39 79.49 27 5.57 Yes 14 0.98 Yes 0 0 No -26 0.69 Yes 44 72.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 39573584 + NM_001308020 PIK3C3 1 0.62 0.53 25 12.69 99.52 31 5.74 Yes 26 0.48 No 0 0 No -23 0.54 No 47 81.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 39576970 + NM_001308020 PIK3C3 1 0.16 0.11 7 7.43 83.06 16 5.66 Yes 69 -1.76 No 0 0 No -20 0.76 Yes 50 84.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 39583425 + NM_001308020 PIK3C3 1 0.19 0.14 9 8.45 86.91 21 5.85 Yes 48 0.17 No 0 0 No -32 0.83 Yes 38 89.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 39600605 + NM_001308020 PIK3C3 1 0.91 0.97 41 -0.79 0 36 4.88 No 59 0.76 No 0 0 No -31 0.25 No 42 40.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 39601165 + NM_001308020 PIK3C3 1 0.35 0.31 15 9.09 94.03 32 4.64 No 30 0.97 Yes 0 0 No -23 0.64 No 47 58.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 39605360 + NM_001308020 PIK3C3 1 0.27 0.19 11 8.6 73.61 44 6.51 Yes 39 1.03 Yes 0 0 No -34 0.47 No 30 46.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 39615334 + NM_001308020 PIK3C3 1 0.27 0.35 17 -2.87 60.22 36 6.3 Yes 72 1.19 Yes 0 0 No -35 0.57 No 27 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 39627551 + NM_001308020 PIK3C3 1 0.36 0.35 19 4.8 89.62 26 5 No 18 0.35 No 0 0 No -25 0.88 Yes 45 74.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 39631142 + NM_001308020 PIK3C3 1 0.48 0.31 18 11.38 92.99 23 3.99 No 17 0.76 No 0 0 No -22 0.94 Yes 48 91.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 39647357 + NM_001308020 PIK3C3 1 0.27 0.21 11 1.15 0 16 3.18 No 59 0.56 No 0 0 No -23 0.74 Yes 47 76.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 178921301 + NM_006218 PIK3CA 1 0.64 0.47 23 3.87 72.45 33 7.08 Yes 20 1.44 Yes 34 0.59 Yes -32 0.71 Yes 38 82.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 178928199 + NM_006218 PIK3CA 1 0.63 0.44 29 4.68 67.21 30 5.46 No 17 0.17 No 24 0.73 Yes -29 0.39 No 37 55.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 178941874 + NM_006218 PIK3CA 1 0.12 0.1 7 0.75 0 12 3.87 No 16 1.28 Yes 0 0 No -34 0.92 Yes 36 93.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 178948102 + NM_006218 PIK3CA 1 0.28 0.22 14 7.74 90.61 33 4.99 No 44 -2.57 No 0 0 No -33 0.53 No 38 59.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 178951076 + NM_006218 PIK3CA 1 1.51 1.06 48 8.81 82.17 54 8.12 Yes 41 1.15 Yes 0 0 No -27 0.77 Yes 43 61.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 138398301 - NM_006219 PIK3CB 1 0.19 0.13 8 5.09 76.51 58 6.36 Yes 45 0.7 No 0 0 No -25 0.7 Yes 45 68.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 138409905 - NM_006219 PIK3CB 1 2.29 1.21 51 7.81 79.38 36 5.68 Yes 52 0.44 No 0 0 No -28 0.52 No 42 46.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 138416892 - NM_006219 PIK3CB 1 1.15 0.82 40 10.1 78.8 9 5.74 Yes 36 0.52 No 0 0 No -28 0.51 No 47 56.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 138426744 - NM_006219 PIK3CB 1 0.18 0.13 8 2.38 66.21 33 6.81 Yes 75 0 No 0 0 No -32 0.36 No 38 57.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 138442698 - NM_006219 PIK3CB 1 0.31 0.18 12 5.7 71.9 27 8.97 Yes 14 1.57 Yes 0 0 No -35 0.71 Yes 35 64.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 138451535 - NM_006219 PIK3CB 1 0.22 0.14 10 -1.33 0 51 7.55 Yes 50 2.42 Yes 0 0 No -50 0.9 Yes 20 95.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 138460667 - NM_006219 PIK3CB 1 0.22 0.13 9 9.84 88.27 25 5.48 No 12 0.53 No 0 0 No -24 0.94 Yes 46 94.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 138461598 - NM_006219 PIK3CB 1 0.35 0.19 10 6.17 84.95 18 5.84 Yes 37 0.17 No 28 0.51 Yes -28 0.7 Yes 50 56.12 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 138471898 - NM_006219 PIK3CB 1 0.18 0.1 7 9.81 87.82 22 6.16 Yes 9 1.4 Yes 0 0 No -21 0.87 Yes 49 87.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9770162 + NM_005026 PIK3CD 1 0.62 1 37 8.17 82.58 34 6.08 Yes 21 1.68 Yes 0 0 No -33 0.62 No 41 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 9751732 + NM_005026 PIK3CD 1 0.96 1.56 51 6.5 78.75 29 4.55 No 16 0.2 No 28 0.62 Yes -28 0.45 No 42 35.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 9753472 + NM_005026 PIK3CD 1 2.25 3.83 69 7.74 93.23 25 6 Yes 12 0.95 Yes 0 0 No -24 0.89 Yes 46 94.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9767055 + NM_005026 PIK3CD 1 0.13 0.24 15 9.29 88.27 28 7.58 Yes 15 1.47 Yes 0 0 No -27 0.9 Yes 43 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9770162 + NM_005026 PIK3CD 1 2.6 4.24 70 8.17 82.58 34 6.08 Yes 21 1.68 Yes 0 0 No -33 0.62 No 41 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 9771975 + NM_005026 PIK3CD 1 0.07 0.17 10 5.15 84.41 32 6.44 Yes 19 0.83 Yes 0 0 No -28 0.58 No 45 48.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 9776515 + NM_005026 PIK3CD 1 0.3 0.5 24 4.18 92.08 23 4.69 No 25 2.28 Yes 0 0 No -37 0.79 Yes 33 60.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 9777027 + NM_005026 PIK3CD 1 0.67 1.33 48 2.35 0 14 4.47 No 18 2.14 Yes 0 0 No -30 0.7 Yes 40 90.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9777103 + NM_005026 PIK3CD 1 4.52 9.32 72 -2.8 62.77 46 8.24 Yes 45 1.57 Yes 23 0.85 Yes -45 0.85 Yes 25 86.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 9777121 + NM_005026 PIK3CD 1 1.21 2.53 62 4.68 84.12 24 4.86 No 63 1.57 Yes 23 0.85 Yes -20 0.6 No 52 23.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 9777514 + NM_005026 PIK3CD 1 0.51 0.69 35 4.58 64.34 22 7.4 Yes 9 1.77 Yes 0 0 No -21 0.51 No 49 63.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 9780491 + NM_005026 PIK3CD 1 1.84 1.61 54 5.93 80.85 23 5.56 Yes 7 -0.52 No 22 0.91 Yes -22 0.9 Yes 48 80.59 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 9780802 + NM_005026 PIK3CD 1 11.25 14.18 72 2.07 72.85 25 6.16 Yes 12 1.8 Yes 0 0 No -24 0.96 Yes 46 90.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9780808 + NM_005026 PIK3CD 1 0.1 0.15 7 -7.25 0 12 3.87 No 18 1.79 Yes 0 0 No -30 0.9 Yes 40 85.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9781163 + NM_005026 PIK3CD 1 0.19 0.32 20 1.24 62.06 128 10.71 Yes 21 2.27 Yes 24 0.62 Yes -33 0.67 Yes 37 57.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 9782614 + NM_005026 PIK3CD 1 0.08 0.14 7 5.72 82.77 10 5.2 No 48 1.61 Yes 0 0 No -60 0.82 Yes 10 39.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 9743953 - NR_126368 PIK3CD-AS2 1 1.55 0.51 30 8.18 83.24 27 5.56 Yes 14 0.99 Yes 0 0 No -26 0.76 Yes 44 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 106512875 + NM_001282427 PIK3CG 1 0.13 0.1 7 6.03 83.06 26 4.98 No 13 0.75 No 0 0 No -25 0.87 Yes 45 89.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 106513121 + NM_001282427 PIK3CG 1 0.55 0.31 20 -9.95 0 10 3.87 No 59 0.24 No 23 0.75 Yes -22 0.41 No 61 28.88 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 106519945 + NM_001282427 PIK3CG 1 0.66 0.33 18 -3.57 0 23 5.76 Yes 53 0.96 Yes 36 0.42 Yes -18 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 106523456 + NM_001282427 PIK3CG 1 0.15 0.1 7 4.37 77.6 12 4.87 No 45 0.36 No 26 0.79 Yes -46 0.17 No 52 68.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 106529677 + NM_001282427 PIK3CG 1 0.19 0.13 8 8.36 84.21 36 7.96 Yes 63 2.06 Yes 0 0 No -35 0.93 Yes 35 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 106529866 + NM_001282427 PIK3CG 1 1.12 0.64 32 9.65 85.83 15 6.55 Yes 62 1.08 Yes 0 0 No -40 0.33 No 30 45.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 67538783 + NM_181523 PIK3R1 1 0.11 0.19 11 6.43 81.93 43 7.4 Yes 49 2.32 Yes 0 0 No -42 0.66 No 28 74.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 67580320 + NM_181523 PIK3R1 1 0.11 0.14 9 8.16 80.36 23 5.47 No 10 0.58 No 0 0 No -25 0.93 Yes 45 91.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 67591974 + NM_181523 PIK3R1 1 1.66 2.64 65 7.91 78.52 25 6.08 Yes 12 1.48 Yes 24 0.96 Yes -24 0.89 Yes 46 88.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 18279198 + NR_073517 PIK3R2 1 0.51 0.26 15 4.17 82.36 19 5 No 53 0.87 Yes 0 0 No -22 0.83 Yes 48 85.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18279539 + NR_073517 PIK3R2 1 0.26 0.15 9 -0.35 0 40 6.54 Yes 27 1.22 Yes 0 0 No -39 0.9 Yes 31 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46525297 - NM_001303427 PIK3R3 1 0.09 0.11 8 6.49 78.35 23 6.91 Yes 76 1.24 Yes 0 0 No -22 0.87 Yes 48 94.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46532637 - NM_001303427 PIK3R3 1 0.48 0.89 36 4.27 78.08 30 6.59 Yes 17 1.55 Yes 0 0 No -29 0.75 Yes 41 64.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 46532785 - NM_001303427 PIK3R3 1 0.19 0.32 18 -0.57 58.2 30 5.11 No 43 0.79 Yes 25 0.5 Yes -29 0.8 Yes 41 81.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 46542522 - NM_001303427 PIK3R3 1 0.13 0.24 12 5.21 82.65 17 3.73 No 4 1.77 Yes 0 0 No -26 0.56 No 43 39.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 130425976 - NM_014602 PIK3R4 1 0.2 0.11 8 -0.88 0 29 6.39 Yes 16 0.81 Yes 0 0 No -28 0.88 Yes 42 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 130450579 - NM_014602 PIK3R4 1 0.4 0.28 14 7.65 92.11 25 4.14 No 67 -3.63 No 0 0 No -25 0.36 No 45 44.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 130461117 - NM_014602 PIK3R4 1 1.64 0.71 34 6.88 94.28 24 4.75 No 5 1.07 Yes 0 0 No -23 0.95 Yes 47 95.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8784330 - NM_014308 PIK3R5 1 0.47 0.18 11 0.27 0 25 6.78 Yes 12 1.78 Yes 0 0 No -24 0.89 Yes 46 87.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8789920 - NM_014308 PIK3R5 1 34.01 4.28 70 2.36 72.95 112 11.33 Yes 60 1.99 Yes 20 0.37 Yes -37 0.45 No 14 76.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 8791960 - NM_014308 PIK3R5 1 1.13 0.26 14 6.98 92.81 17 7.62 Yes 4 2.03 Yes 0 0 No -24 0.45 No 46 60.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 8792271 - NM_014308 PIK3R5 1 0.72 0.11 7 9.44 77.83 25 5.57 Yes 12 1.41 Yes 24 0.88 Yes -24 0.92 Yes 46 90.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8808265 - NM_014308 PIK3R5 1 0.52 0.15 10 8.16 81.71 18 4.9 No 5 1.13 Yes 38 0.83 Yes -22 0.62 No 48 65.19 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 8707069 - NM_001290211 PIK3R6 1 0.12 0.17 10 5.47 0 19 4.58 No 6 1.48 Yes 0 0 No -18 0.87 Yes 52 92.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8707121 - NM_001290211 PIK3R6 1 0.53 0.75 32 8.68 86.68 19 5.48 No 6 0.76 No 23 0.77 Yes -18 0.67 Yes 52 83.36 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 8709525 - NM_001290211 PIK3R6 1 0.16 0.24 11 10.77 90.47 32 6.86 Yes 19 0.92 Yes 0 0 No -31 0.73 Yes 39 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8722511 - NM_001290211 PIK3R6 1 1.38 1.85 59 4.66 0 13 3.87 No 17 0.04 No 0 0 No -27 0.6 No 41 81.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 8726860 - NM_001290211 PIK3R6 1 0.19 0.17 10 4.61 76.24 23 5.29 No 23 0.14 No 0 0 No -22 0.87 Yes 48 83.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 8730250 - NM_001290211 PIK3R6 1 1.17 1.15 48 1.77 71.09 41 6.32 Yes 70 -5.74 No 0 0 No -18 0.72 Yes 52 87.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 8730609 - NM_001290211 PIK3R6 1 6.77 3.65 70 2.67 73.84 33 6.86 Yes 20 1.98 Yes 0 0 No -32 0.89 Yes 38 91.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8730686 - NM_001290211 PIK3R6 1 2.99 1.75 56 3.32 77.69 21 5.76 Yes 13 -2.62 No 0 0 No -24 0.59 No 46 56.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 8735519 - NM_001290211 PIK3R6 1 1.09 0.9 35 8 85.59 35 5.65 Yes 72 -4.46 No 0 0 No -34 0.56 No 36 64.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 8738726 - NM_001290211 PIK3R6 1 0.1 0.1 7 8.08 76.65 26 5.66 Yes 13 0.83 Yes 0 0 No -25 0.86 Yes 45 90.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8743217 - NM_001290211 PIK3R6 1 0.61 0.58 33 1.08 76.83 37 6.28 Yes 41 0.44 No 0 0 No -25 0.66 No 45 80.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 8746173 - NM_001290211 PIK3R6 1 1.68 1.57 49 6.62 79.62 41 9.67 Yes 28 1.22 Yes 0 0 No -33 0.42 No 30 70.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 8751113 - NM_001290211 PIK3R6 1 0.32 0.29 17 3.01 0 23 6.81 Yes 10 0.43 No 0 0 No -28 0.6 No 42 57.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 8762577 - NM_001290211 PIK3R6 1 0.27 0.44 23 7.83 88.73 25 5.7 Yes -3 1.44 Yes 0 0 No -24 0.96 Yes 46 95.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8762944 - NM_001290211 PIK3R6 1 0.16 0.28 17 10.57 92.63 30 6.66 Yes 71 1.44 Yes 0 0 No -29 0.76 Yes 36 63.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 8764492 - NM_001290211 PIK3R6 1 0.13 0.21 13 3.01 0 48 8.37 Yes 74 -1.14 No 0 0 No -47 0.67 Yes 23 85.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 209138741 + NM_015040 PIKFYVE 1 2.98 1.44 53 5.35 80 36 7.19 Yes 23 0.91 Yes 24 0.78 Yes -24 0.7 Yes 46 65.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 209138744 + NM_015040 PIKFYVE 1 2 1.03 47 4.72 79.9 39 7.4 Yes 26 0.9 Yes 24 0.78 Yes -27 0.66 No 43 61.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 209142343 + NM_015040 PIKFYVE 1 0.35 0.13 9 2.28 81.12 20 4.96 No 75 -6.26 No 0 0 No -23 0.84 Yes 47 87.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 209145387 + NM_015040 PIKFYVE 1 0.44 0.21 13 4.24 82.09 23 5.91 Yes 10 1.48 Yes 0 0 No -22 0.59 No 48 70.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 209149864 + NM_015040 PIKFYVE 1 0.82 0.38 23 5.98 93.18 28 5.29 No 21 -1.45 No 0 0 No -27 0.66 No 43 51.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 209168794 + NM_015040 PIKFYVE 1 0.37 0.22 13 5.41 71.75 48 6.82 Yes 35 0.91 Yes 0 0 No -32 0.72 Yes 38 79.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 209169944 + NM_015040 PIKFYVE 1 0.89 0.29 16 9.68 88.13 31 10.5 Yes 56 1.76 Yes 0 0 No -30 0.86 Yes 40 88.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 209185017 + NM_015040 PIKFYVE 1 0.47 0.28 15 2.97 79.34 27 6.77 Yes 52 0.57 No 0 0 No -26 0.86 Yes 44 70.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 209189638 + NM_015040 PIKFYVE 1 0.37 0.26 17 0.31 0 29 6.63 Yes 16 0.82 Yes 0 0 No -29 0.41 No 42 79.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 209195226 + NM_015040 PIKFYVE 1 0.12 0.1 7 -2.02 67.43 41 5.09 No 16 1.18 Yes 25 0.93 Yes -28 0.67 Yes 30 75.04 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 209198106 + NM_015040 PIKFYVE 1 0.94 0.46 23 2.86 72.2 41 6.74 Yes 53 0.99 Yes 0 0 No -24 0.54 No 46 62.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 209204143 + NM_015040 PIKFYVE 1 0.14 0.13 9 4.3 88.31 27 5.25 No 18 0.57 No 0 0 No -26 0.95 Yes 44 97.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 209215503 + NM_015040 PIKFYVE 1 0.19 0.17 10 0.29 0 14 4.24 No 36 0.53 No 0 0 No -31 0.44 No 39 36.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99973743 + NM_013439 PILRA 1 0.64 0.19 12 9.56 92.57 19 5.17 No 2 0.54 No 25 0.47 Yes -31 0.25 No 45 29.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 99997445 + NM_013439 PILRA 1 0.94 0.51 18 8.15 85.1 35 6.86 Yes 53 2.3 Yes 29 0.71 Yes -34 0.62 No 36 56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 37138974 + NM_002648 PIM1 1 0.83 0.51 27 3.81 70.58 27 5.74 Yes 58 -3.1 No 0 0 No -26 0.8 Yes 44 56.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 48771842 - NM_006875 PIM2 1 0.1 0.46 23 -9.44 0 11 4 No 14 2.1 Yes 0 0 No -26 0.71 Yes 44 72.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48772666 - NM_006875 PIM2 1 0.68 1.94 56 0.68 0 54 8.54 Yes 41 2.5 Yes 0 0 No -53 0.81 Yes 17 95.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50355302 + NM_001001852 PIM3 1 2.73 1.79 54 9.66 90.53 30 6 Yes 42 -3.4 No 0 0 No -29 0.5 No 51 42.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 9947030 + NR_038422 PIN1 1 3.84 0.28 13 9.67 85.59 32 6.32 Yes 34 1.6 Yes 23 0.9 Yes -31 0.63 No 39 73.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 9947333 + NR_038422 PIN1 1 1.36 0.13 8 6.09 89.15 23 4.8 No 76 -3.84 No 0 0 No -22 0.86 Yes 48 93.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 9948687 + NR_038422 PIN1 1 2.4 0.19 12 11.37 92.97 30 5.63 Yes 23 0.89 Yes 29 0.86 Yes -29 0.77 Yes 41 69.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 9948687 + NR_038422 PIN1 1 24.62 2.19 58 11.37 92.97 30 5.63 Yes 23 0.89 Yes 29 0.86 Yes -29 0.77 Yes 41 69.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 9959770 + NR_038422 PIN1 1 0.13 0.25 17 2.47 0 35 6.93 Yes 22 2.26 Yes 0 0 No -34 0.89 Yes 36 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 71406083 + NM_001170747 PIN4 1 0.43 0.21 10 9.53 86.44 18 6.03 Yes 5 0.85 Yes 24 0.62 Yes -24 0.66 Yes 46 80.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 10645336 - NM_017884 PINX1 1 0.88 0.81 38 11.66 93.23 27 4.51 No 14 1.41 Yes 26 0.88 Yes -26 0.96 Yes 44 96.87 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 10654772 - NM_017884 PINX1 1 0.15 0.15 11 9.76 89.12 20 6 Yes 51 1.45 Yes 0 0 No -31 0.39 No 55 42.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 10671891 - NM_017884 PINX1 1 0.33 0.28 17 8.3 89.35 30 7.03 Yes 17 1.35 Yes 0 0 No -29 0.74 Yes 41 83.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22828003 - NM_001330062 PIP4K2A 1 0.8 3.49 68 9.08 94.39 16 5.48 No 41 -2.66 No 0 0 No -23 0.82 Yes 47 91.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 22829027 - NM_001330062 PIP4K2A 1 0.05 0.17 10 7.43 75.81 14 5.33 No 51 1.55 Yes 21 0.72 Yes -27 0.32 No 45 67.15 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 22856700 - NM_001330062 PIP4K2A 1 0.02 0.1 7 7.96 82.48 22 8.71 Yes 9 1.24 Yes 21 0.63 Yes -21 0.68 Yes 49 69.32 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr10 22857984 - NM_001330062 PIP4K2A 1 0.29 1.28 51 8.72 92.75 26 5.98 Yes 13 0.61 No 25 0.7 Yes -22 0.55 No 45 82.76 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 22862380 - NM_001330062 PIP4K2A 1 0.03 0.11 7 -2.63 0 14 4 No 34 0.73 No 0 0 No -46 0.89 Yes 24 92.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 22870874 - NM_001330062 PIP4K2A 1 0.04 0.18 11 9.32 87.82 24 7.41 Yes 11 1 Yes 0 0 No -23 0.97 Yes 47 96.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22877535 - NM_001330062 PIP4K2A 1 0.1 0.47 26 5.58 82.96 73 6.1 Yes 60 1.72 Yes 0 0 No -27 0.69 Yes 43 74.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22878328 - NM_001330062 PIP4K2A 1 0.05 0.21 9 9.81 94.84 75 9.37 Yes 12 0.81 Yes 0 0 No -24 0.85 Yes 46 85.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 22880697 - NM_001330062 PIP4K2A 1 0.24 1 48 1.26 81.1 24 4.8 No 51 1.14 Yes 0 0 No -60 0.4 No 14 52.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 22882265 - NM_001330062 PIP4K2A 1 0.12 0.57 30 8.08 77.82 31 5.74 Yes 61 0.43 No 0 0 No -30 0.67 Yes 40 48.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 22891320 - NM_001330062 PIP4K2A 1 0.09 0.36 21 9.78 88.27 78 10.14 Yes 65 2.51 Yes 0 0 No -69 0.09 No 40 22.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 22896951 - NM_001330062 PIP4K2A 1 0.03 0.13 8 -4.59 70.98 32 6.13 Yes 33 1.32 Yes 0 0 No -31 0.82 Yes 39 78.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36926021 - NM_003559 PIP4K2B 1 0.08 0.1 7 0.82 0 28 5.46 No 72 0.78 Yes 0 0 No -27 0.7 Yes 43 60.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 36927133 - NM_003559 PIP4K2B 1 0.16 0.18 11 11.07 90.78 19 6.33 Yes 6 1.62 Yes 0 0 No -31 0.65 No 35 77.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 36932561 - NM_003559 PIP4K2B 1 1.29 1.53 52 3.63 69.45 21 4.24 No 49 1.61 Yes 0 0 No -27 0.73 Yes 43 62.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 36932879 - NM_003559 PIP4K2B 1 0.56 0.68 39 11.35 91.5 45 6.46 Yes 32 1.05 Yes 44 0.35 Yes -44 0.83 Yes 26 81.14 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 36935974 - NM_003559 PIP4K2B 1 0.18 0.15 9 7.71 79.11 31 6.08 Yes 18 1.26 Yes 0 0 No -30 0.96 Yes 40 96.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36936186 - NM_003559 PIP4K2B 1 2.99 2.54 61 8.86 90.15 13 5.1 No 61 -3.73 No 25 0.52 Yes -19 0.73 Yes 51 86.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 36942378 - NM_003559 PIP4K2B 1 1.06 1 45 8.18 85.51 55 8.82 Yes 42 1.26 Yes 0 0 No -36 0.56 No 40 54.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 36946622 - NM_003559 PIP4K2B 1 0.72 0.65 33 8.96 79.7 29 6.48 Yes 16 1.78 Yes 0 0 No -28 0.83 Yes 42 88.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 36949136 - NM_003559 PIP4K2B 1 0.16 0.15 9 3.14 95.71 17 4.22 No 4 0.25 No 29 0.53 Yes -20 0.71 Yes 50 57.84 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 36949139 - NM_003559 PIP4K2B 1 0.19 0.19 12 -0.33 0 14 3.92 No 1 0.25 No 29 0.53 Yes -17 0.62 No 44 70.67 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 36951997 - NM_003559 PIP4K2B 1 0.12 0.11 8 2.44 0 50 8.61 Yes 65 0.66 No 0 0 No -34 0.59 No 36 86.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 57991740 + NM_024779 PIP4K2C 1 1.22 0.82 37 1.76 69.79 14 3.67 No 75 -5.41 No 32 0.33 Yes -20 0.6 No 50 46.23 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 57993534 + NM_024779 PIP4K2C 1 0.98 0.5 23 2.45 84.92 39 7.28 Yes 26 1.06 Yes 0 0 No -38 0.44 No 32 68.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 151178779 + NM_001135638 PIP5K1A 1 0.34 0.19 8 -2.13 69.5 34 8.12 Yes 21 0.5 No 0 0 No -33 0.87 Yes 37 91.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 151178783 + NM_001135638 PIP5K1A 1 0.82 0.53 27 -7.93 0 38 8.36 Yes 25 0.5 No 0 0 No -37 0.81 Yes 33 90.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 151179062 + NM_001135638 PIP5K1A 1 0.36 0.24 12 3.69 87.93 37 7.16 Yes 24 1.45 Yes 0 0 No -36 0.93 Yes 34 93.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151185955 + NM_001135638 PIP5K1A 1 1.94 1.15 39 6.48 85.05 25 6.51 Yes 12 0.66 No 20 0.84 Yes -23 0.64 No 46 73.22 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 151196723 + NM_001135638 PIP5K1A 1 200.69 117.01 72 7.42 81.61 39 5.14 No 13 0.72 No 25 0.82 Yes -28 0.79 Yes 42 69.92 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 151214603 + NM_001135638 PIP5K1A 1 0.6 0.88 35 -1.24 0 33 6 Yes 20 0.86 Yes 0 0 No -32 0.81 Yes 38 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151214655 + NM_001135638 PIP5K1A 1 1.37 2 61 3.99 79.43 21 6.56 Yes 8 1.09 Yes 0 0 No -20 0.69 Yes 50 66.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 71434548 + NM_001278253 PIP5K1B 1 0.68 0.39 24 3.02 71.83 59 8.32 Yes 4 1.2 Yes 0 0 No -22 0.51 No 48 50.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 71434554 + NM_001278253 PIP5K1B 1 0.2 0.1 7 0.53 0 12 3.87 No 10 1.17 Yes 0 0 No -22 0.84 Yes 48 86.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 71437514 + NM_001278253 PIP5K1B 1 0.13 0.1 7 -5.78 0 22 4.56 No 59 0.33 No 25 0.77 Yes -51 0.31 No 16 48.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 71472934 + NM_001278253 PIP5K1B 1 0.24 0.17 11 4.85 90.21 21 4.94 No 8 1.25 Yes 0 0 No -20 0.59 No 44 55.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 71482134 + NM_001278253 PIP5K1B 1 0.08 0.1 7 -2.42 58.94 46 8.97 Yes 26 1.01 Yes 0 0 No -45 0.46 No 25 66.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 71495961 + NM_001278253 PIP5K1B 1 0.25 0.22 12 10.17 89.64 18 5.29 No 27 1.13 Yes 0 0 No -22 0.69 Yes 48 73.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3652189 - NM_001300849 PIP5K1C 1 0.32 0.17 12 6.42 89.38 24 5 No 24 1.62 Yes 0 0 No -23 0.95 Yes 47 95.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3656658 - NM_001300849 PIP5K1C 1 0.33 0.42 16 3.94 73.6 31 6.08 Yes 18 1.39 Yes 0 0 No -30 0.9 Yes 40 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3657760 - NM_001300849 PIP5K1C 1 0.14 0.14 8 10.28 85.86 40 7.55 Yes 27 0.9 Yes 0 0 No -39 0.61 No 31 68.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 3658720 - NM_001300849 PIP5K1C 1 0.18 0.18 12 9.23 93.27 22 5.1 No 47 0.18 No 0 0 No -21 0.56 No 49 64.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 3661045 - NM_001300849 PIP5K1C 1 0.73 0.56 28 9.53 85.45 22 6.03 Yes 9 1.53 Yes 0 0 No -21 0.94 Yes 49 83.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 3661525 - NM_001300849 PIP5K1C 1 2.27 1.85 56 6.25 79.61 29 8.53 Yes 16 0.65 No 0 0 No -28 0.67 Yes 42 58.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 3667482 - NM_001300849 PIP5K1C 1 0.58 0.13 8 5.72 73.9 26 5.56 Yes 13 1.16 Yes 0 0 No -25 0.91 Yes 45 93.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 15509916 - NM_001018109 PIR 1 0.43 0.19 12 2.42 83.79 12 4.8 No 64 -4.15 No 0 0 No -23 0.71 Yes 47 75.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 15431074 - NR_037859 PIR-FIGF 1 0.19 0.21 11 2.89 74.24 22 6.35 Yes 62 0.88 Yes 0 0 No -29 0.55 No 41 75.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 15436795 - NR_037859 PIR-FIGF 1 0.1 0.13 8 9.37 97.37 34 5.6 Yes 46 0.73 No 0 0 No -22 0.8 Yes 48 78.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 15447972 - NR_037859 PIR-FIGF 1 0.12 0.14 7 2.42 0 36 6.91 Yes 23 1.91 Yes 35 0.82 Yes -35 0.51 No 35 83.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 15471923 - NR_037859 PIR-FIGF 1 0.29 0.29 16 7 82.53 22 5.65 Yes 65 -3.96 No 0 0 No -28 0.66 No 49 58.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 15473248 - NR_037859 PIR-FIGF 1 0.16 0.18 11 4.35 82.76 20 4.69 No 7 0.26 No 0 0 No -19 0.76 Yes 51 60.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 15496666 - NR_037859 PIR-FIGF 1 0.12 0.11 7 8.57 83.3 25 5.48 No 20 0.79 Yes 0 0 No -24 0.54 No 38 63.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 32015806 - NM_014338 PISD 1 0.14 0.19 13 0.3 65.77 25 5.1 No 26 2.32 Yes 0 0 No -38 0.73 Yes 32 53.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 32016586 - NM_014338 PISD 1 3.08 3.29 67 8.92 83.82 38 7.62 Yes 25 0.78 Yes 37 0.55 Yes -25 0.57 No 49 69.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 32016685 - NM_014338 PISD 1 0.11 0.11 8 1.61 75.76 25 4.84 No NA NA NA 0 0 No -38 0.6 No 53 47.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 32017809 - NM_014338 PISD 1 0.99 0.56 28 4.91 78.26 40 6.3 Yes 75 0.85 Yes 0 0 No -27 0.34 No 31 49.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 24112866 + NM_020362 PITHD1 1 0.08 0.15 10 0.48 65.97 72 7.93 Yes 17 0.58 No 0 0 No -29 0.51 No 34 49.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 24113747 + NM_020362 PITHD1 1 0.52 1.14 47 0.23 68.7 18 5.82 Yes 76 -3.37 No 23 0.98 Yes -17 0.56 No 53 63.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 1423832 - NM_006224 PITPNA 1 0.04 0.11 7 -8.67 0 23 7.1 Yes 10 1.26 Yes 0 0 No -27 0.63 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 1436895 - NM_006224 PITPNA 1 0.06 0.18 13 3.19 67.73 44 6.93 Yes 74 0.21 No 0 0 No -43 0.79 Yes 27 72.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1437459 - NM_006224 PITPNA 1 0.06 0.17 10 0.3 60.64 30 5.48 No 68 1.83 Yes 0 0 No -23 0.49 No 47 43.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 1451999 - NM_006224 PITPNA 1 0.04 0.1 7 6.39 74.2 41 5.59 Yes 46 0.77 Yes 0 0 No -31 0.62 No 35 62.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 28254462 - NM_001284278 PITPNB 1 0.13 0.42 26 4.67 78.72 19 6.23 Yes 74 0.69 No 0 0 No -18 0.61 No 52 86.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 28254494 - NM_001284278 PITPNB 1 0.08 0.26 17 -7.31 0 55 5.98 Yes 53 0.79 Yes 0 0 No -33 0.69 Yes 37 78.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 28256227 - NM_001284278 PITPNB 1 0.91 2.36 58 1.1 81.19 33 5.67 Yes 20 0.67 No 0 0 No -40 0.47 No 30 64.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 28288319 - NM_001284278 PITPNB 1 0.87 3.1 64 11.19 89.65 25 6.16 Yes 54 0.18 No 0 0 No -24 0.51 No 46 40.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 28290411 - NM_001284278 PITPNB 1 0.19 0.67 36 1.38 74.58 51 6.42 Yes 39 -1.13 No 0 0 No -50 0.41 No 20 64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 28307092 - NM_001284278 PITPNB 1 0.05 0.14 7 0.98 0 16 3.87 No 28 1.93 Yes 0 0 No -36 0.86 Yes 34 90.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 28307122 - NM_001284278 PITPNB 1 0.08 0.25 16 2.65 72.61 18 5.28 No -2 0.91 Yes 30 0.92 Yes -21 0.43 No 49 34.62 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 65559129 + NM_012417 PITPNC1 1 0.18 0.14 8 8.33 89.71 29 4.34 No 1 0.79 Yes 0 0 No -29 0.65 No 44 74.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 65638343 + NM_012417 PITPNC1 1 0.15 0.13 8 9.44 95.26 22 5.7 Yes 9 0.03 No 0 0 No -30 0.39 No 45 42.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 65639706 + NM_012417 PITPNC1 1 0.36 0.17 10 9.08 76.88 22 5.88 Yes 63 -2.72 No 0 0 No -22 0.61 No 48 74.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 67260530 - NM_001130848 PITPNM1 1 0.36 0.28 16 -1.99 0 25 7.81 Yes 12 0.96 Yes 0 0 No -24 0.83 Yes 46 79.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67261024 - NM_001130848 PITPNM1 1 3.9 2.13 63 7.2 82.68 17 6.32 Yes 50 2.09 Yes 0 0 No -20 0.65 No 49 51.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67262591 - NM_001130848 PITPNM1 1 4.09 1.71 54 5.46 82.88 45 7.46 Yes 32 2.28 Yes 0 0 No -26 0.85 Yes 44 71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67263820 - NM_001130848 PITPNM1 1 301.95 50.78 72 3.52 76.44 35 7.19 Yes 22 2.06 Yes 34 0.81 Yes -34 0.74 Yes 36 86.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67264583 - NM_001130848 PITPNM1 1 0.78 0.17 8 4.72 71.15 30 5.68 Yes -4 0.58 No 0 0 No -26 0.67 Yes 62 48.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67267299 - NM_001130848 PITPNM1 1 4.95 3.64 68 3.05 77.04 26 5.29 No 13 1.02 Yes 0 0 No -25 0.75 Yes 45 89.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67267464 - NM_001130848 PITPNM1 1 0.73 0.42 24 8.32 86.47 24 5.1 No 19 0.14 No 0 0 No -19 0.43 No 51 69.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67268544 - NM_001130848 PITPNM1 1 0.19 0.11 7 10.1 92.45 25 5.22 No 66 0.99 Yes 0 0 No -24 0.83 Yes 46 88.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67268696 - NM_001130848 PITPNM1 1 0.47 0.31 18 6.13 83.59 14 6.63 Yes 52 2.17 Yes 0 0 No -19 0.71 Yes 51 76.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67271348 - NM_001130848 PITPNM1 1 3.54 1.36 42 8.92 85.27 41 5.31 No 28 1.59 Yes 21 0.86 Yes -21 0.88 Yes 49 86.34 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 3199278 - NM_001242309 PITRM1 1 0.11 0.13 8 -6.96 0 14 4.47 No 65 -5.92 No 28 0.88 Yes -7 0.57 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 3206074 - NM_001242309 PITRM1 1 0.34 0.47 25 0.38 0 31 5.7 Yes 46 0.83 Yes 0 0 No -30 0.96 Yes 40 96.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 3207523 - NM_001242309 PITRM1 1 0.36 0.51 25 1.59 0 34 3.88 No 4 0.43 No 0 0 No -22 0.75 Yes 43 63.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 3207676 - NM_001242309 PITRM1 1 2.24 3.25 70 3.73 61.19 39 6.97 Yes 51 0.44 No 0 0 No -33 0.65 No 32 72.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 3207716 - NM_001242309 PITRM1 1 0.22 0.33 19 -0.27 0 24 5.84 Yes 11 0.45 No 0 0 No -31 0.47 No 39 48.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 3208566 - NM_001242309 PITRM1 1 0.1 0.19 12 2.39 0 10 4 No 29 1.17 Yes 0 0 No -46 0.42 No 24 64.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 68382978 - NM_001032396 PJA1 1 13.91 1.83 60 4.05 0 14 3.87 No 40 -3.81 No 21 0.49 Yes -27 0.48 No 57 56.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 68383142 - NM_001032396 PJA1 1 1.69 0.25 14 3.4 66.98 33 7.93 Yes 25 1.09 Yes 32 0.82 Yes -37 0.45 No 33 64.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 68383310 - NM_001032396 PJA1 1 17.88 2.42 59 8.12 75.3 15 5.28 No 51 1.16 Yes 32 0.64 Yes -21 0.3 No 38 44.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 108674172 - NM_014819 PJA2 1 0.15 0.42 24 2.31 0 22 5.73 Yes 14 1.42 Yes 0 0 No -26 0.84 Yes 44 76.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 108674177 - NM_014819 PJA2 1 0.09 0.24 13 6.2 85.22 17 5.27 No 9 1.44 Yes 0 0 No -21 0.88 Yes 49 80.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 108678946 - NM_014819 PJA2 1 0.13 0.33 17 -11.6 69.59 135 12.21 Yes 70 1.02 Yes 0 0 No -18 0.24 No 12 9.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 108726460 - NM_014819 PJA2 1 0.6 1.17 46 8.46 85.72 25 5.45 No 53 0.13 No 27 0.43 Yes -27 0.74 Yes 43 64.47 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 108729680 - NM_014819 PJA2 1 0.1 0.18 10 8.32 92.22 25 6.94 Yes 12 0.96 Yes 0 0 No -25 0.78 Yes 45 69.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 108740649 - NM_014819 PJA2 1 0.06 0.11 7 9.43 84.45 28 7.81 Yes 15 1.74 Yes 0 0 No -27 0.76 Yes 43 78.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2142162 - NM_001009944 PKD1 1 1.01 0.13 7 5.26 83.25 23 3.72 No 56 0.24 No 0 0 No -22 0.61 No 48 56.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2143048 - NM_001009944 PKD1 1 1.26 0.14 10 2.29 70.76 15 6.6 Yes 60 1.47 Yes 0 0 No -32 0.61 No 38 72.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 2143276 - NM_001009944 PKD1 1 1.93 0.22 15 13.02 86.64 30 5.57 Yes 23 0.32 No 0 0 No -24 0.91 Yes 46 92.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2147223 - NM_001009944 PKD1 1 0.78 0.1 7 1.41 79.26 18 4.79 No 56 1.02 Yes 0 0 No -20 0.32 No 16 32.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 2147779 - NM_001009944 PKD1 1 42.8 4.18 66 6.56 81.57 25 5.48 No 75 -2.38 No 21 0.9 Yes -24 0.88 Yes 46 83.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2148027 - NM_001009944 PKD1 1 1.02 0.19 13 7.51 83.89 33 5.68 Yes 5 1.11 Yes 21 0.94 Yes -32 0.76 Yes 38 87.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2150285 - NM_001009944 PKD1 1 0.61 0.13 9 8.84 84.81 22 5.29 No 37 2.29 Yes 0 0 No -21 0.9 Yes 49 88.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2155617 - NM_001009944 PKD1 1 4.05 0.49 27 4.86 79.72 21 6.48 Yes 8 1.38 Yes 0 0 No -20 0.86 Yes 50 85.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2155664 - NM_001009944 PKD1 1 6.43 1 40 5.42 80.38 38 7.29 Yes 70 1.13 Yes 25 0.16 Yes -37 0.68 Yes 33 75.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2155709 - NM_001009944 PKD1 1 1.89 0.26 17 6.01 80.04 32 5.81 Yes 25 1.12 Yes 24 0.69 Yes -27 0.68 Yes 43 71.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2155712 - NM_001009944 PKD1 1 6.03 0.72 37 7.44 82.9 29 5.55 No 22 1.12 Yes 24 0.69 Yes -24 0.68 Yes 46 72.91 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 2157193 - NM_001009944 PKD1 1 4.02 0.6 20 8.7 79.96 23 4.94 No 38 1.15 Yes 0 0 No -22 0.83 Yes 48 82.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2162401 - NM_001009944 PKD1 1 0.86 0.15 9 7 85.22 22 4.93 No NA NA NA 0 0 No -22 0.76 Yes 48 83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2165147 - NM_001009944 PKD1 1 0.63 0.13 9 5.32 0 34 6.32 Yes NA NA NA 0 0 No -33 0.71 Yes 37 86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2165152 - NM_001009944 PKD1 1 1.24 0.28 14 8.97 85.66 29 5.92 Yes NA NA NA 0 0 No -28 0.74 Yes 42 86.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 16417608 + NR_036447 PKD1P1 1 2.37 1.58 56 11.14 87.43 21 7.14 Yes 65 -2.49 No 0 0 No -24 0.83 Yes 50 29.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 16417997 + NR_036447 PKD1P1 1 1.17 0.75 37 8.49 87.34 23 4.94 No 14 0.73 No 0 0 No -22 0.84 Yes 48 83.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 16419478 + NR_036447 PKD1P1 1 0.61 0.57 31 7.13 82.9 29 5.54 No 22 0.53 No 0 0 No -24 0.67 Yes 46 69.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 16419481 + NR_036447 PKD1P1 1 0.17 0.18 13 4.47 80.04 32 5.8 Yes 25 0.54 No 0 0 No -27 0.66 Yes 43 66.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 16419526 + NR_036447 PKD1P1 1 0.12 0.14 9 5.42 80.38 38 6.4 Yes 70 0.55 No 0 0 No -37 0.74 Yes 33 73.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 16420732 + NR_036447 PKD1P1 1 0.19 0.13 7 -4.03 0 18 4.47 No 75 -6.04 No 0 0 No -17 0.52 No 39 34.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 16420760 + NR_036447 PKD1P1 1 0.19 0.15 9 3.72 69.2 34 5.74 Yes NA NA NA 0 0 No -26 0.6 No 44 51.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 16420763 + NR_036447 PKD1P1 1 0.21 0.21 10 2.5 69.98 37 6 Yes NA NA NA 0 0 No -29 0.62 No 41 37.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 16420802 + NR_036447 PKD1P1 1 0.15 0.14 7 5.17 85.12 16 5.48 No 33 -2.05 No 0 0 No -23 0.72 Yes 47 57.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 16429717 + NR_036447 PKD1P1 1 0.7 0.19 12 -0.14 0 9 3.87 No 51 0.43 No 0 0 No -36 0.79 Yes 34 84.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 16431250 + NR_036447 PKD1P1 1 0.32 0.11 7 3.6 85.02 17 6.45 Yes 4 1.2 Yes 19 0.72 Yes -28 0.88 Yes 42 84.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 15217234 - NR_123722 PKD1P6-NPIPP1 1 6.93 0.33 20 3.13 70.99 30 7.73 Yes 67 0.28 No 0 0 No -32 0.56 No 38 80.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 15217425 - NR_123722 PKD1P6-NPIPP1 1 7.65 0.78 32 -0.14 0 9 3.87 No 51 0.43 No 0 0 No -36 0.79 Yes 34 84.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 15219461 - NR_123722 PKD1P6-NPIPP1 1 0.99 0.13 8 0.39 79.38 21 5.2 No 72 -2.18 No 23 0.43 Yes -25 0.55 No 45 53.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 15219706 - NR_123722 PKD1P6-NPIPP1 1 3.61 0.25 13 0.07 0 18 4.47 No 20 0.14 No 0 0 No -17 0.73 Yes 38 66.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 15219717 - NR_123722 PKD1P6-NPIPP1 1 9.1 0.69 27 4.56 87.75 22 5 No 9 0.15 No 0 0 No -21 0.78 Yes 49 87.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 15219872 - NR_123722 PKD1P6-NPIPP1 1 20.77 1.38 51 4.18 75.44 18 5 No 76 -4.1 No 0 0 No -23 0.47 No 47 37.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 15221247 - NR_123722 PKD1P6-NPIPP1 1 5.69 0.46 21 0.84 79.57 19 4.8 No NA NA NA 0 0 No -18 0.52 No 46 36.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 88952236 + NM_000297 PKD2 1 5.35 1.51 55 7.33 95.68 20 6.57 Yes 7 0.26 No 0 0 No -26 0.82 Yes 44 87.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 88957287 + NM_000297 PKD2 1 2.43 0.69 31 9.11 89.58 27 5.41 No 55 -2.84 No 26 0.59 Yes -26 0.78 Yes 44 79.95 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 88965860 + NM_000297 PKD2 1 0.6 0.1 7 8.85 88.71 25 5.48 No 12 0.69 No 0 0 No -24 0.84 Yes 46 86.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 88967945 + NM_000297 PKD2 1 0.93 0.19 11 -0.8 64.55 38 5.45 No 30 0.47 No 0 0 No -42 0.5 No 28 71.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 88979178 + NM_000297 PKD2 1 0.45 0.17 11 3.48 83.7 37 5.16 No 24 0.22 No 0 0 No -36 0.65 No 34 82.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 88981131 + NM_000297 PKD2 1 0.32 0.11 7 8.04 78.13 27 5.56 Yes 14 1.36 Yes 0 0 No -26 0.57 No 44 66.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 88986764 + NM_000297 PKD2 1 1.1 0.44 23 10.8 95.65 30 5.66 Yes 17 1 Yes 0 0 No -29 0.92 Yes 41 93.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 88986911 + NM_000297 PKD2 1 0.48 0.18 10 -8.14 0 30 6.55 Yes 55 0.84 Yes 25 0.8 Yes -23 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 110542862 + NM_177531 PKHD1L1 1 10.85 4.13 66 9.06 89.8 17 4.38 No 4 1.12 Yes 0 0 No -22 0.94 Yes 48 97.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 110542862 + NM_177531 PKHD1L1 1 65.58 29.58 72 9.06 89.8 17 4.38 No 4 1.12 Yes 0 0 No -22 0.94 Yes 48 97.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43213740 + NM_001281445 PKIG 1 6.38 3.44 55 4.78 83.75 25 5.07 No 50 0.35 No 24 0.53 Yes -24 0.79 Yes 43 67.5 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 43227256 + NM_001281445 PKIG 1 0.41 0.36 18 9.74 82.48 35 5.8 Yes 61 1.53 Yes 29 0.9 Yes -29 0.94 Yes 41 88.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 43246928 + NM_001281445 PKIG 1 0.89 0.36 19 5.02 77.34 31 5.04 No 57 0.82 Yes 0 0 No -24 0.41 No 39 56.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 72492984 - NM_001206797 PKM 1 0.01 0.32 18 5.82 81.74 16 4.66 No 36 0.98 Yes 0 0 No -48 0.77 Yes 22 93.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72495077 - NM_001206797 PKM 1 0.01 0.26 15 9.06 91.34 30 6.32 Yes 17 0.76 No 0 0 No -29 0.84 Yes 41 91.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 72495530 - NM_001206797 PKM 1 5.26 188.61 72 7.65 80.83 117 9.55 Yes -2 0.6 No 30 0.17 Yes -37 0.42 No 15 35.47 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 72511441 - NM_001206797 PKM 1 0 0.1 7 -6.57 0 18 4.47 No 45 1.85 Yes 0 0 No -41 0.91 Yes 29 88.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72511444 - NM_001206797 PKM 1 0.01 0.53 25 -6.08 0 15 4.12 No 42 1.85 Yes 0 0 No -38 0.9 Yes 32 92.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 72513626 - NM_001206797 PKM 1 0.15 5.01 71 8.48 81.73 32 4.96 No 13 1.33 Yes 25 0.89 Yes -25 0.49 No 41 62.45 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 72521996 - NM_001206797 PKM 1 0.01 0.44 24 -10.07 74.01 19 5 No 25 0.03 No 0 0 No -18 0.62 No 16 41.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 3023103 - NM_001258450 PKMYT1 1 0.11 0.1 7 -10.33 0 9 3.87 No 21 -1.96 No 24 0.93 Yes -33 0.37 No 35 61.28 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 3023255 - NM_001258450 PKMYT1 1 2.09 1.67 54 5.24 66.2 17 5.74 Yes 69 1.83 Yes 26 0.51 Yes -16 0.59 No 54 72.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 3023310 - NM_001258450 PKMYT1 1 0.28 0.19 11 5.62 86.07 27 7.07 Yes 14 1.86 Yes 0 0 No -26 0.92 Yes 44 93.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3026091 - NM_001258450 PKMYT1 1 0.32 0.25 15 10.42 84.7 36 5.91 Yes 42 0.75 No 28 0.39 Yes -28 0.65 No 35 44.83 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 3026157 - NM_001258450 PKMYT1 1 0.21 0.15 9 5.83 81.07 28 5.51 No 16 -2.9 No 0 0 No -27 0.78 Yes 43 64.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 3029938 - NM_001258450 PKMYT1 1 8.03 5.97 71 8.6 82.28 25 5.39 No 66 1.2 Yes 25 0.94 Yes -25 0.88 Yes 45 72.84 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 3029958 - NM_001258450 PKMYT1 1 0.36 0.32 16 7.91 86.2 30 4.83 No 46 1.2 Yes 25 0.94 Yes -58 0.32 No 48 69.08 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 3029995 - NM_001258450 PKMYT1 1 0.16 0.13 9 5.87 82.68 22 5.1 No 9 1.2 Yes 0 0 No -21 0.91 Yes 49 94.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14557220 + NM_213560 PKN1 1 0.05 0.11 7 7.53 86.46 24 4.75 No 60 0.25 No 20 0.56 Yes -23 0.52 No 47 75.65 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 14572810 + NM_213560 PKN1 1 0.23 0.46 24 6.87 85.04 45 7.05 Yes 52 1.12 Yes 0 0 No -28 0.61 No 42 76.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 14577527 + NM_213560 PKN1 1 0.08 0.17 8 5.13 74.49 18 5.54 No 5 0.53 No 0 0 No -29 0.67 Yes 41 48.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 14580523 + NM_213560 PKN1 1 0.09 0.19 13 11.74 90.81 18 5.19 No 5 1.54 Yes 22 0.97 Yes -22 0.96 Yes 48 94.06 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 14581427 + NM_213560 PKN1 1 0.29 0.74 38 -7.36 0 20 4.47 No 52 1.34 Yes 20 0.63 Yes -22 0.65 No 48 22.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 14581913 + NM_213560 PKN1 1 0.11 0.26 14 9.78 86.44 41 7.61 Yes 28 2.16 Yes 40 0.74 Yes -27 0.51 No 43 63.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 89234515 + NM_001320708 PKN2 1 0.35 0.26 13 5.3 89.23 29 5.29 No 64 0.96 Yes 0 0 No -31 0.42 No 39 70.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 89255668 + NM_001320708 PKN2 1 1.05 0.31 19 7.89 81.21 28 6.63 Yes 15 1.19 Yes 0 0 No -27 0.75 Yes 43 77.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 89271584 + NM_001320708 PKN2 1 1.12 0.49 25 0.17 0 14 4.47 No 20 0.55 No 0 0 No -32 0.54 No 38 71.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 89273376 + NM_001320708 PKN2 1 0.99 0.39 23 1.52 0 18 4.14 No 74 0.83 Yes 0 0 No -31 0.42 No 39 52.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131475547 + NM_013355 PKN3 1 1 0.17 12 -7.11 0 14 4.47 No 1 1.25 Yes 22 0.85 Yes -13 0.6 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 131476919 + NM_013355 PKN3 1 1.25 0.19 11 8.4 88.71 20 4.17 No 65 0.8 Yes 0 0 No -27 0.45 No 43 47.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131482201 + NM_013355 PKN3 1 0.46 0.11 8 5.81 82.88 18 4.69 No 18 1.35 Yes 0 0 No -30 0.47 No 53 57.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131482651 + NM_013355 PKN3 1 1.42 0.35 21 6.53 87.73 28 4.54 No 19 0.91 Yes 23 0.93 Yes -31 0.66 No 39 75.63 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr21 44412009 + NM_001320694 PKNOX1 1 2.13 0.39 20 6.62 82.89 45 6.14 Yes 24 1.05 Yes 0 0 No -32 0.39 No 38 77.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 44441418 + NM_001320694 PKNOX1 1 0.96 0.35 18 -3.47 0 11 3.8 No 17 1.61 Yes 0 0 No -29 0.78 Yes 41 77.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 159314379 + NM_001304971 PKP4 1 0.79 0.18 10 6.86 78.34 27 8.06 Yes 14 1.86 Yes 26 0.95 Yes -26 0.97 Yes 44 95.92 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 159389949 + NM_001304971 PKP4 1 1.97 0.56 27 5.44 78.83 64 7.37 Yes 14 1.73 Yes 26 0.86 Yes -26 0.85 Yes 44 71.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 159434680 + NM_001304971 PKP4 1 0.54 0.17 11 5.81 87.49 26 6.39 Yes 13 1.76 Yes 25 0.95 Yes -25 0.84 Yes 45 90.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 159444736 + NM_001304971 PKP4 1 0.56 0.24 16 8.21 85.96 28 5.92 Yes -2 0.38 No 30 0.41 Yes -27 0.39 No 43 46.39 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 159445399 + NM_001304971 PKP4 1 0.24 0.13 8 7.61 83.21 27 5.09 No 73 1.6 Yes 26 0.78 Yes -26 0.6 No 44 62.96 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 159475107 + NM_001304971 PKP4 1 1.04 0.33 19 8.73 80.69 31 4.64 No 9 0.76 No 0 0 No -21 0.85 Yes 49 89.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 159481466 + NM_001304971 PKP4 1 6.26 2.44 64 6.81 84.37 30 5.39 No 67 -3.67 No 24 0.53 Yes -27 0.53 No 46 69.79 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 159481471 + NM_001304971 PKP4 1 0.32 0.1 7 2.16 0 35 5.83 Yes 72 -3.68 No 0 0 No -32 0.38 No 41 73.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 159481636 + NM_001304971 PKP4 1 3.5 1.35 50 4.76 77.87 24 5.1 No 11 0.87 Yes 23 0.96 Yes -23 0.97 Yes 47 97.62 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 159490584 + NM_001304971 PKP4 1 51.12 13.15 72 2.12 80.37 31 5.92 Yes 18 1.48 Yes 27 0.89 Yes -30 0.9 Yes 40 95.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 119331850 + NM_001206961 PLA1A 1 0.3 0.35 15 0.38 76.54 12 4.8 No 29 0.36 No 20 0.87 Yes -25 0.71 Yes 63 30.34 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 119333091 + NM_001206961 PLA1A 1 1.4 1.92 50 10.61 89.45 28 6.89 Yes 43 0.03 No 0 0 No -28 0.6 No 43 54.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 119338922 + NM_001206961 PLA1A 1 0.54 1.13 41 10.21 85.4 34 8.06 Yes 21 1.68 Yes 33 0.59 Yes -33 0.67 Yes 37 84.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 119339615 + NM_001206961 PLA1A 1 0.06 0.13 8 3.63 77.36 32 5.57 Yes 64 -1.94 No 0 0 No -31 0.78 Yes 39 74.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119339665 + NM_001206961 PLA1A 1 0.61 1.25 48 6.47 80.07 29 5.86 Yes 1 0.54 No 0 0 No -28 0.68 Yes 42 68.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 110647762 - NM_030821 PLA2G12A 1 1.01 0.32 16 6.88 82.93 16 4.12 No 3 1.33 Yes 0 0 No -23 0.87 Yes 47 83.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68282471 + NM_012320 PLA2G15 1 0.86 0.18 11 4.72 85.02 18 5.38 No 5 0.66 No 23 0.49 Yes -23 0.61 No 47 49.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 68282474 + NM_012320 PLA2G15 1 1.09 0.19 13 3.25 80.12 21 5.65 Yes 8 0.63 No 0 0 No -26 0.56 No 50 49.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68287324 + NM_012320 PLA2G15 1 3.86 0.75 30 6.39 90.92 28 5.29 No 66 0.65 No 27 0.73 Yes -27 0.69 Yes 43 55.35 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 68288845 + NM_012320 PLA2G15 1 0.64 0.11 8 1.11 65.56 32 5.74 Yes 55 0.68 No 0 0 No -31 0.77 Yes 39 51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68289793 + NM_012320 PLA2G15 1 10.96 2 59 7.64 88.07 27 6.56 Yes 75 -3.91 No 27 0.65 Yes -24 0.67 Yes 46 64.26 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 63358687 - NM_007069 PLA2G16 1 0.32 0.14 10 6.04 86.16 21 5.2 No 69 0.84 Yes 0 0 No -28 0.6 No 44 58.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 186811804 + NM_001311193 PLA2G4A 1 0.58 0.25 12 5.78 83.61 18 4.9 No 39 -3.78 No 0 0 No -22 0.78 Yes 48 48.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 186818447 + NM_001311193 PLA2G4A 1 0.54 0.28 17 10.3 97.03 27 7.09 Yes 14 1.76 Yes 0 0 No -26 0.67 Yes 44 82.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38511684 - NM_003560 PLA2G6 1 1.08 0.11 8 1.35 0 35 5.32 No 40 -0.47 No 0 0 No -36 0.58 No 36 65.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 38511857 - NM_003560 PLA2G6 1 14.02 1.5 50 10.03 87.26 23 5.39 No 10 0.78 Yes 22 0.91 Yes -22 0.95 Yes 48 94.69 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 38512418 - NM_003560 PLA2G6 1 4.1 0.67 32 4.33 76.38 16 6.71 Yes 76 0.24 No 26 0.53 Yes -25 0.55 No 45 66.71 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 38515813 - NM_003560 PLA2G6 1 0.88 0.14 9 10.13 92.91 37 7.14 Yes 24 1.13 Yes 0 0 No -36 0.79 Yes 34 86.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38518293 - NM_003560 PLA2G6 1 6.18 0.53 31 6.24 76.21 30 9.05 Yes 17 1.71 Yes 0 0 No -29 0.91 Yes 41 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38521699 - NM_003560 PLA2G6 1 43.22 3.68 65 8.97 89.03 15 5.66 Yes 2 1.68 Yes 22 0.53 Yes -29 0.2 No 41 37.88 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 38523466 - NM_003560 PLA2G6 1 66.73 3.1 63 10.34 92.43 18 5.42 No 75 1.59 Yes 23 0.61 Yes -30 0.48 No 40 86.89 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 38526197 - NM_003560 PLA2G6 1 2.42 0.36 17 6.99 85.41 18 4.69 No 37 -1.08 No 0 0 No -21 0.6 No 49 70.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 38540986 - NM_003560 PLA2G6 1 18.89 2.13 63 2.8 83.18 25 5.2 No -2 0.12 No 24 0.92 Yes -24 0.64 No 45 58.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 38543483 - NM_003560 PLA2G6 1 1.51 0.28 14 5.8 80.22 20 5.47 No 7 1.54 Yes 27 0.83 Yes -27 0.59 No 43 65.42 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 38544631 - NM_003560 PLA2G6 1 3.49 0.6 28 6.71 86.84 23 5.07 No 68 1.7 Yes 22 0.93 Yes -22 0.97 Yes 48 97.49 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 26906073 - NM_001321546 PLAA 1 0.06 0.14 8 -11.32 0 21 4.56 No 8 1.29 Yes 0 0 No -23 0.55 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 26908015 - NM_001321546 PLAA 1 0.22 0.35 20 -8.53 0 16 4.47 No 47 -4.71 No 22 0.72 Yes -19 0.51 No 15 51.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 26908836 - NM_001321546 PLAA 1 0.05 0.1 7 -4.21 0 14 4 No 73 1.05 Yes 0 0 No -35 0.77 Yes 35 80.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 26928209 - NM_001321546 PLAA 1 0.08 0.14 9 -1.1 0 15 4.34 No 17 0.8 Yes 0 0 No -35 0.3 No 35 48.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84015956 - NM_001130715 PLAC8 1 0.01 0.15 10 1.45 0 27 5.99 Yes 14 0.54 No 31 0.52 Yes -26 0.43 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 84029089 - NM_001130715 PLAC8 1 0.01 0.11 7 4.3 78.22 18 4.85 No 23 2.06 Yes 0 0 No -35 0.85 Yes 35 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84029103 - NM_001130715 PLAC8 1 0.01 0.1 7 -11.78 0 22 6.08 Yes 54 1.95 Yes 0 0 No -21 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84031967 - NM_001130715 PLAC8 1 0.01 0.15 7 10.52 94.42 17 6 Yes 4 1.5 Yes 0 0 No -29 0.72 Yes 41 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84032620 - NM_001130715 PLAC8 1 0.01 0.13 8 -4.82 0 51 8.42 Yes 38 1.59 Yes 0 0 No -50 0.52 No 20 74.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84032625 - NM_001130715 PLAC8 1 0.03 0.29 16 -0.27 84.41 46 8.12 Yes 33 1.61 Yes 0 0 No -23 0.59 No 25 63.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 144281694 - NM_001317156 PLAGL1 1 34.09 8.43 71 0.13 61.01 21 5.72 Yes 0 0.93 Yes 26 0.53 Yes -26 0.65 No 58 46.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 144281718 - NM_001317156 PLAGL1 1 0.55 0.13 8 -1.18 71 21 4.8 No 13 0.41 No 25 0.66 Yes -23 0.54 No 50 58.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 30790113 - NM_002657 PLAGL2 1 0.22 0.1 7 6.55 81.07 26 6.64 Yes 13 -0.63 No 24 0.92 Yes -25 0.95 Yes 45 94.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 113808946 + NM_001159727 PLBD2 1 0.42 0.17 9 6.66 80.78 23 5.2 No 10 0.92 Yes 0 0 No -22 0.91 Yes 48 91.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40580844 - NM_004573 PLCB2 1 2.35 0.54 25 9.48 93.36 36 6.48 Yes 61 1.84 Yes 35 0.45 Yes -35 0.92 Yes 35 91.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40581141 - NM_004573 PLCB2 1 0.51 0.13 7 -5.63 0 11 4.12 No -2 0.24 No 23 0.54 Yes -10 0.61 No 60 66.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 40588092 - NM_004573 PLCB2 1 1.4 0.35 21 6.59 80.06 46 6.84 Yes 68 -3.01 No 0 0 No -31 0.78 Yes 48 59.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40591676 - NM_004573 PLCB2 1 0.54 0.18 11 5.79 73.45 34 7.46 Yes 21 2.41 Yes 0 0 No -33 0.74 Yes 37 90.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40593811 - NM_004573 PLCB2 1 5.2 1.5 50 2.59 75.44 18 4.76 No 5 0.69 No 22 0.73 Yes -17 0.81 Yes 53 88.51 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 40593882 - NM_004573 PLCB2 1 0.47 0.11 8 3.17 79.25 16 8.66 Yes 66 0.75 No 0 0 No -15 0.51 No 55 65.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64022597 + NM_000932 PLCB3 1 2.21 0.29 15 7.08 80.15 24 6.35 Yes 11 1.14 Yes 0 0 No -23 0.94 Yes 47 96.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64025878 + NM_000932 PLCB3 1 0.62 0.13 8 7.16 88.52 24 4.83 No 32 -1.28 No 0 0 No -24 0.65 No 46 77.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 64026088 + NM_000932 PLCB3 1 0.89 0.17 10 3.51 71.48 43 6.7 Yes 30 0.07 No 0 0 No -25 0.55 No 45 69.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64027510 + NM_000932 PLCB3 1 0.78 0.1 7 0.04 0 14 4.2 No 29 2.21 Yes 0 0 No -34 0.82 Yes 36 81.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64029657 + NM_000932 PLCB3 1 3.68 0.56 26 9.54 85.97 18 6.69 Yes 5 2.34 Yes 0 0 No -24 0.42 No 53 40.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 64035975 + NM_000932 PLCB3 1 4.81 0.81 29 9.32 87.76 27 4.11 No 60 -1.07 No 26 0.82 Yes -26 0.73 Yes 44 83.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 39790901 + NM_182811 PLCG1 1 0.24 0.17 10 9.31 93.81 56 7.75 Yes 72 1.3 Yes 0 0 No -55 0.59 No 17 86.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 39790974 + NM_182811 PLCG1 1 0.36 0.22 15 5.71 0 19 4.58 No 26 2.14 Yes 25 0.46 Yes -18 0.77 Yes 32 58.79 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr20 39791013 + NM_182811 PLCG1 1 0.81 0.63 29 5.15 84.11 26 5.2 No 65 2.13 Yes 25 0.46 Yes -20 0.39 No 50 68.11 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 39798800 + NM_182811 PLCG1 1 4.69 2.38 63 7.37 84.96 26 6.05 Yes 25 0.07 No 27 0.59 Yes -26 0.58 No 45 52.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 39800791 + NM_182811 PLCG1 1 0.24 0.15 9 7.24 89.16 16 5.45 No NA NA NA 22 0.78 Yes -23 0.53 No 47 86.8 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr20 39801062 + NM_182811 PLCG1 1 0.24 0.18 9 -0.61 73.86 26 5.66 Yes 13 0.74 No 20 0.5 Yes -26 0.77 Yes 44 88.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 39801197 + NM_182811 PLCG1 1 0.17 0.11 8 6.26 73.53 29 5.48 No 65 -2.91 No 0 0 No -23 0.92 Yes 47 91.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 39801062 + NM_182811 PLCG1 1 0.4 0.36 21 -0.61 73.86 26 5.66 Yes 13 0.74 No 20 0.5 Yes -26 0.77 Yes 44 88.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr20 39801197 + NM_182811 PLCG1 1 0.55 0.44 24 6.26 73.53 29 5.48 No 65 -2.91 No 0 0 No -23 0.92 Yes 47 91.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 39802763 + NM_182811 PLCG1 1 351.56 66.76 72 2.22 71.95 30 6.51 Yes 17 1.81 Yes 29 0.87 Yes -29 0.77 Yes 37 84.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 81825194 + NM_002661 PLCG2 1 0.55 1.46 55 9.71 94.39 40 5.95 Yes 27 0.76 No 0 0 No -34 0.72 Yes 36 81.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 81855857 + NM_002661 PLCG2 1 0.13 0.33 18 10.94 86.49 20 7.21 Yes 7 0.87 Yes 0 0 No -24 0.61 No 51 49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 81875824 + NM_002661 PLCG2 1 0.2 0.54 11 11.5 91.89 29 5.48 No 61 -0.75 No 0 0 No -29 0.81 Yes 41 81.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 81885654 + NM_002661 PLCG2 1 0.12 0.32 18 8.95 93.37 39 7.63 Yes 26 1.67 Yes 38 0.53 Yes -38 0.82 Yes 32 95.25 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 81889608 + NM_002661 PLCG2 1 0.04 0.11 8 0.53 72.16 25 6.1 Yes 12 2.46 Yes 0 0 No -24 0.81 Yes 46 83.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81894299 + NM_002661 PLCG2 1 0.03 0.14 9 1.38 79.43 23 3.7 No 66 0.41 No 0 0 No -30 0.34 No 45 55.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81895312 + NM_002661 PLCG2 1 0.06 0.31 15 2.41 65.19 36 7.09 Yes 23 1.91 Yes 0 0 No -35 0.86 Yes 35 92.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81896824 + NM_002661 PLCG2 1 0.04 0.19 11 7.61 80.58 25 5.7 Yes 12 1.92 Yes 0 0 No -31 0.44 No 45 56.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 81902824 + NM_002661 PLCG2 1 0.05 0.24 11 -2.44 0 10 3.86 No 21 0.48 No 0 0 No -33 0.87 Yes 37 94.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 81903907 + NM_002661 PLCG2 1 0.07 0.26 15 10.49 90.19 10 5.29 No 65 0.87 Yes 0 0 No -26 0.7 Yes 49 66.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 81904082 + NM_002661 PLCG2 1 0.17 0.58 30 4.12 67.89 27 5.23 No 68 -4.26 No 0 0 No -27 0.51 No 43 46.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81916868 + NM_002661 PLCG2 1 0.07 0.31 12 2.92 76.79 22 9.31 Yes 9 1.92 Yes 26 0.91 Yes -21 0.87 Yes 49 87.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 81917099 + NM_002661 PLCG2 1 0.06 0.22 13 2.53 67.35 34 9.63 Yes 57 1.54 Yes 0 0 No -33 0.88 Yes 37 93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81922779 + NM_002661 PLCG2 1 0.07 0.24 15 -11.11 65.7 31 7 Yes 18 1.87 Yes 0 0 No -30 0.57 No 40 78.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 81924873 + NM_002661 PLCG2 1 0.14 0.61 29 0.78 66.82 22 4.9 No 21 -3.96 No 0 0 No -19 0.8 Yes 49 57.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 81930307 + NM_002661 PLCG2 1 0.09 0.35 19 6.22 91.95 26 6.24 Yes 38 1.68 Yes 0 0 No -25 0.94 Yes 45 93.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81931480 + NM_002661 PLCG2 1 1.44 5.99 72 8.92 84.59 35 6.74 Yes 67 -2.38 No 22 0.56 Yes -22 0.47 No 48 52.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 81935541 + NM_002661 PLCG2 1 0.15 0.49 19 -7.6 0 17 4.24 No 25 0.57 No 0 0 No -37 0.39 No 16 59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81935631 + NM_002661 PLCG2 1 0.03 0.1 7 2.48 79.79 49 7.35 Yes 36 0.6 No 0 0 No -23 0.88 Yes 27 48.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 81936901 + NM_002661 PLCG2 1 0.6 1.88 56 7.75 93.83 32 4.76 No 58 -3.48 No 0 0 No -25 0.85 Yes 45 93.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 81939821 + NM_002661 PLCG2 1 0.59 1.99 59 9.22 97 25 4.86 No 12 0.87 Yes 24 0.95 Yes -24 0.9 Yes 46 94.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 81945087 + NM_002661 PLCG2 1 0.11 0.38 21 4 84.95 27 5.29 No 57 -2.17 No 0 0 No -26 0.82 Yes 44 80.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 81957095 + NM_002661 PLCG2 1 0.14 0.56 26 -2.42 0 11 3.87 No 22 2.48 Yes 0 0 No -34 0.9 Yes 36 92.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81962165 + NM_002661 PLCG2 1 0.02 0.13 9 -15.16 0 32 5.74 Yes 19 1.4 Yes 0 0 No -31 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 81962511 + NM_002661 PLCG2 1 0.38 1.88 50 8.84 96.58 17 4.64 No 4 0.76 No 0 0 No -22 0.55 No 45 58.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81964757 + NM_002661 PLCG2 1 0.04 0.18 10 10.3 84.04 27 4.89 No 41 1.19 Yes 0 0 No -27 0.61 No 43 76.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 81968036 + NM_002661 PLCG2 1 0.05 0.22 13 -16.49 56.93 25 5.05 No 12 -0.98 No 0 0 No -24 0.92 Yes 37 27.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 81969141 + NM_002661 PLCG2 1 0.23 1.13 45 7.53 80.97 27 5.74 Yes 14 0.58 No 0 0 No -26 0.86 Yes 44 82.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 81969774 + NM_002661 PLCG2 1 0.03 0.13 9 -12.77 0 25 5.7 Yes 9 1.48 Yes 0 0 No -24 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 81971427 + NM_002661 PLCG2 1 0.58 2.42 52 2.6 80.49 45 6.92 Yes 67 1.17 Yes 0 0 No -44 0.75 Yes 26 91.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81972463 + NM_002661 PLCG2 1 0.03 0.11 7 9.45 80.98 24 5.39 No NA NA NA 0 0 No -19 0.41 No 51 48.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 81981008 + NM_002661 PLCG2 1 0.23 0.89 37 8.27 85.17 38 6.17 Yes 69 0.87 Yes 0 0 No -23 0.58 No 33 42.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 81981579 + NM_002661 PLCG2 1 0.03 0.1 7 9.55 89.88 28 5.48 No 15 0.35 No 0 0 No -27 0.91 Yes 43 75.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 81989133 + NM_002661 PLCG2 1 0.02 0.11 7 11.26 82.61 30 6 Yes 17 1.44 Yes 0 0 No -29 0.82 Yes 41 89.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81989269 + NM_002661 PLCG2 1 0.07 0.26 17 3.84 74.05 57 7.61 Yes 44 1.4 Yes 0 0 No -56 0.71 Yes 14 90.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 81989306 + NM_002661 PLCG2 1 0.16 0.6 32 7.68 87.07 25 5.38 No -2 1.19 Yes 0 0 No -24 0.84 Yes 46 72.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17094218 + NM_001144382 PLCL2 1 0.12 0.13 8 9.44 78.95 28 6.32 Yes 29 0.86 Yes 0 0 No -27 0.75 Yes 43 83.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17121963 + NM_001144382 PLCL2 1 0.57 0.64 29 9.85 95.2 21 6.78 Yes 8 0.96 Yes 0 0 No -29 0.65 No 50 75.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 17122679 + NM_001144382 PLCL2 1 0.52 0.49 28 7.64 68.33 36 7.05 Yes 23 0.95 Yes 35 0.63 Yes -35 0.79 Yes 35 79.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 171321626 - NM_002662 PLD1 1 0.15 0.11 7 6.18 82.03 25 6.49 Yes -2 0.44 No 0 0 No -29 0.4 No 41 42.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 171326157 - NM_002662 PLD1 1 1.83 0.79 34 1.75 63.87 28 5.54 No 33 1.55 Yes 0 0 No -27 0.93 Yes 43 94.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 171329425 - NM_002662 PLD1 1 3.95 1.71 53 7.33 94.56 24 5.15 No 59 -3.58 No 23 0.82 Yes -23 0.5 No 47 32.55 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 171361955 - NM_002662 PLD1 1 0.34 0.25 13 5.47 66.29 35 6.84 Yes 43 2.25 Yes 0 0 No -34 0.53 No 35 86.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 171372084 - NM_002662 PLD1 1 1.21 0.76 32 3.06 0 37 11.77 Yes 24 1.2 Yes 36 0.87 Yes -36 0.95 Yes 34 95.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 171383118 - NM_002662 PLD1 1 0.88 0.53 24 7.86 87.89 18 5.83 Yes 46 0.44 No 0 0 No -21 0.56 No 49 56.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 171406688 - NM_002662 PLD1 1 0.24 0.19 8 -3.09 0 17 4.46 No 26 -3.02 No 23 0.61 Yes -16 0.57 No 54 25.21 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 171406716 - NM_002662 PLD1 1 0.23 0.17 9 6.58 89.04 16 5.29 No -2 -1.27 No 0 0 No -23 0.66 No 47 72.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 171413921 - NM_002662 PLD1 1 0.25 0.13 8 3.12 87.12 21 4.69 No 8 1.09 Yes 0 0 No -20 0.85 Yes 50 95.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 171414128 - NM_002662 PLD1 1 0.22 0.15 8 -1.54 51.61 69 8.1 Yes 56 1.08 Yes 0 0 No -26 0.43 No 44 23.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 171414311 - NM_002662 PLD1 1 0.28 0.15 10 8.67 80.13 38 5.77 Yes 20 0.52 No 0 0 No -41 0.41 No 33 58.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 171426764 - NM_002662 PLD1 1 0.25 0.18 10 9.72 95.74 17 6.23 Yes 49 1.16 Yes 0 0 No -30 0.51 No 48 43.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 171431792 - NM_002662 PLD1 1 2.08 1.14 45 1.7 65.94 32 6 Yes 47 0.64 No 0 0 No -37 0.53 No 39 53.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 171442574 - NM_002662 PLD1 1 0.17 0.14 9 -0.49 0 24 4.61 No 19 0.76 No 0 0 No -31 0.8 Yes 39 84.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 171443863 - NM_002662 PLD1 1 0.38 0.28 17 3.38 0 31 6 Yes 62 0.93 Yes 0 0 No -30 0.82 Yes 40 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 171451299 - NM_002662 PLD1 1 0.17 0.13 7 -15.29 0 78 5.57 Yes 17 1.38 Yes 0 0 No -29 0.72 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 171452791 - NM_002662 PLD1 1 0.66 0.38 20 -2.44 66.27 18 4.69 No 28 -2.73 No 22 0.61 Yes -17 0.72 Yes 61 40.67 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 4719000 + NM_001243108 PLD2 1 1.45 0.22 15 10.38 84.51 39 7.06 Yes 26 2.13 Yes 0 0 No -30 0.96 Yes 40 95.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4719836 + NM_001243108 PLD2 1 4.76 0.36 19 9.77 85.54 33 6.54 Yes -2 0.75 No 0 0 No -32 0.92 Yes 38 93.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4720370 + NM_001243108 PLD2 1 1.95 0.21 12 7.75 80.72 27 5.36 No 14 0.23 No 0 0 No -26 0.93 Yes 44 97.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 40872285 + NM_001291311 PLD3 1 2.82 1.65 50 4.79 67.33 33 6.66 Yes 20 1.35 Yes 37 0.56 Yes -32 0.9 Yes 38 96.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 40872290 + NM_001291311 PLD3 1 5.03 2.67 65 -1.37 0 38 7.02 Yes 25 1.33 Yes 37 0.56 Yes -37 0.89 Yes 33 95.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 40873507 + NM_001291311 PLD3 1 0.07 0.1 7 -3.32 50.91 18 4.38 No 5 -0.62 No 29 0.3 Yes -17 0.53 No 53 29.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 105398111 + NM_138790 PLD4 1 2.41 1.31 41 8.15 87.78 20 4.78 No 64 -2.23 No 0 0 No -19 0.41 No 51 44.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 105398868 + NM_138790 PLD4 1 1.1 0.51 22 9.47 82.01 15 6.05 Yes 74 -3.66 No 0 0 No -24 0.57 No 40 38.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 144992637 - NM_000445 PLEC 1 0.44 0.18 10 9.66 92.31 24 4.9 No 23 0.78 Yes 0 0 No -27 0.65 No 47 63.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145001932 - NM_000445 PLEC 1 0.35 0.24 13 0.46 59.29 35 6.32 Yes 22 0.43 No 0 0 No -34 0.54 No 36 51.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145008369 - NM_000445 PLEC 1 0.29 0.18 10 6.62 75.98 19 3.5 No 59 -0.2 No 0 0 No -18 0.42 No 52 26.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145012584 - NM_000445 PLEC 1 0.83 0.69 34 11.41 87.83 96 10.85 Yes 74 0.88 Yes 40 0.12 Yes -31 0.67 Yes 46 24.05 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 68595497 + NM_002664 PLEK 1 0.05 0.24 17 9.29 88.12 29 7.47 Yes 16 1.91 Yes 0 0 No -28 0.76 Yes 42 86.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 68607438 + NM_002664 PLEK 1 0.06 0.42 15 3.86 81.75 21 4.9 No 67 -3.02 No 23 0.81 Yes -21 0.79 Yes 49 77.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 68607855 + NM_002664 PLEK 1 0.02 0.26 16 -10.47 0 25 6.44 Yes 12 1.38 Yes 0 0 No -24 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 68607866 + NM_002664 PLEK 1 0.03 0.38 20 5.78 0 21 4.58 No 23 1.45 Yes 0 0 No -20 0.69 Yes 35 95.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 68607902 + NM_002664 PLEK 1 0.02 0.28 19 1.49 89.26 24 4.89 No 59 1.44 Yes 0 0 No -23 0.33 No 53 54.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 68611424 + NM_002664 PLEK 1 0.01 0.17 9 6.55 96.63 28 3.71 No 58 1.12 Yes 0 0 No -27 0.58 No 43 49.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 68615522 + NM_002664 PLEK 1 0.02 0.17 11 -2.23 0 35 6 Yes 22 0.95 Yes 0 0 No -29 0.86 Yes 41 88.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 68621242 + NM_002664 PLEK 1 0.14 1.56 56 1.92 0 29 7.26 Yes 75 0.53 No 0 0 No -22 0.43 No 46 44.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 68622815 + NM_002664 PLEK 1 0.24 2.68 64 6.05 0 44 7.93 Yes 31 1.26 Yes 0 0 No -27 0.71 Yes 45 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38793510 + NM_021623 PLEKHA2 1 0.71 0.97 44 -8.94 0 19 5.14 No 12 -1.02 No 25 0.78 Yes -24 0.92 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 38796875 + NM_021623 PLEKHA2 1 0.07 0.11 7 7.11 87.76 19 5 No -2 0.31 No 0 0 No -18 0.6 No 48 65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 38809243 + NM_021623 PLEKHA2 1 0.06 0.1 7 7.5 85.96 16 6.3 Yes 49 1.03 Yes 0 0 No -23 0.7 Yes 47 74.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38826113 + NM_021623 PLEKHA2 1 1.33 3.17 68 0.04 0 26 5.47 No 26 0.73 No 0 0 No -23 0.59 No 47 60.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 179353694 + NM_019091 PLEKHA3 1 16.34 7.15 72 9.49 95.31 26 4.14 No 29 1.57 Yes 25 0.44 Yes -25 0.69 Yes 45 81.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 179355758 + NM_019091 PLEKHA3 1 0.44 0.22 13 4.74 84.41 35 7.23 Yes 22 1.44 Yes 0 0 No -38 0.58 No 32 75.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 30088806 + NM_032639 PLEKHA8 1 2.67 1.13 45 5.35 85.05 39 6.67 Yes 51 -0.9 No 28 0.56 Yes -26 0.58 No 45 55.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 131865033 + NM_001309452 PLEKHB2 1 2.56 1.51 48 12.24 87.59 36 7.44 Yes 23 1.25 Yes 28 0.85 Yes -28 0.39 No 42 54 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 131888272 + NM_001309452 PLEKHB2 1 0.12 0.21 11 -2.69 64.97 30 6.45 Yes 50 -4.6 No 29 0.68 Yes -24 0.58 No 46 52.82 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 131897742 + NM_001309452 PLEKHB2 1 0.1 0.1 7 6.89 96.1 24 7.21 Yes 11 1.47 Yes 20 0.82 Yes -23 0.74 Yes 47 88.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 131897742 + NM_001309452 PLEKHB2 1 13.55 12.46 72 6.89 96.1 24 7.21 Yes 11 1.47 Yes 20 0.82 Yes -23 0.74 Yes 47 88.61 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 131901980 + NM_001309452 PLEKHB2 1 10.09 13.13 72 9.59 85.46 16 5.48 No 30 0.17 No 0 0 No -23 0.83 Yes 47 84.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 30157800 + NM_024310 PLEKHF1 1 0.82 0.19 12 -14.08 73.53 22 5.3 No 51 1.16 Yes 0 0 No -24 0.87 Yes 46 72.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 151072425 + NM_001329799 PLEKHG1 1 0.77 0.14 9 10.27 95.65 21 6.85 Yes 69 1.56 Yes 0 0 No -24 0.71 Yes 46 62.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 151123818 + NM_001329799 PLEKHG1 1 0.92 0.15 10 3.66 84.41 25 6.93 Yes 12 1.08 Yes 0 0 No -24 0.9 Yes 46 84.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 151156113 + NM_001329799 PLEKHG1 1 1.45 0.14 9 6.03 83.16 43 5.39 No 22 1.6 Yes 0 0 No -34 0.47 No 36 60.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39905808 + NM_022835 PLEKHG2 1 7.92 1.68 52 3.01 69.35 27 6.14 Yes 56 -0.26 No 26 0.58 Yes -24 0.45 No 46 71.56 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 39906546 + NM_022835 PLEKHG2 1 1.33 0.51 27 5.63 77.35 22 5.61 Yes 9 0.46 No 0 0 No -27 0.58 No 43 66.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39911359 + NM_022835 PLEKHG2 1 0.28 0.15 10 -9.63 0 16 3.87 No 63 -4.84 No 22 0.75 Yes -28 0.37 No 55 51.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 39911370 + NM_022835 PLEKHG2 1 0.21 0.13 8 -2.19 0 20 4.39 No 74 -4.8 No 22 0.75 Yes -22 0.78 Yes 50 54.85 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 40820921 - NR_073573 PLEKHH3 1 0.48 0.22 14 1.2 80.31 29 5.29 No 65 -5.34 No 0 0 No -28 0.81 Yes 42 31.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 40823567 - NR_073573 PLEKHH3 1 0.37 0.21 11 -6.03 0 17 4.36 No 4 0.83 Yes 0 0 No -34 0.67 Yes 36 56.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 40824231 - NR_073573 PLEKHH3 1 7.7 2.63 66 4.09 83.99 22 5 No 30 0.27 No 21 0.96 Yes -21 0.85 Yes 49 85.88 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40824466 - NR_073573 PLEKHH3 1 0.76 0.22 13 7.52 90.33 31 11.29 Yes 18 2.51 Yes 0 0 No -30 0.9 Yes 40 92.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40825339 - NR_073573 PLEKHH3 1 0.58 0.36 21 7.41 79.53 23 5.39 No 10 -0.24 No 22 0.78 Yes -22 0.79 Yes 48 81.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40826894 - NR_073573 PLEKHH3 1 16.48 4.75 66 7.64 82.47 60 7.77 Yes 23 1.57 Yes 23 0.77 Yes -35 0.84 Yes 35 83.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 2233397 - NM_018049 PLEKHJ1 1 0.35 0.78 34 9.17 85.15 22 5.29 No 46 -0.01 No 21 0.34 Yes -26 0.67 Yes 52 42.53 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 2234255 - NM_018049 PLEKHJ1 1 0.46 0.93 50 -2.8 0 12 3.27 No 41 -4.15 No 22 0.84 Yes -38 0.33 No 35 30.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 2235933 - NM_018049 PLEKHJ1 1 6.33 6.43 71 6.76 80.66 26 4.63 No 13 0.7 No 0 0 No -25 0.68 Yes 45 68.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 16022494 + NM_015164 PLEKHM2 1 0.13 0.26 16 9.29 88.27 32 7.94 Yes 19 1.47 Yes 0 0 No -31 0.79 Yes 39 87.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16042737 + NM_015164 PLEKHM2 1 0.1 0.22 13 5.95 0 9 3.87 No 21 0.82 Yes 0 0 No -33 0.91 Yes 37 95.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16046809 + NM_015164 PLEKHM2 1 2.82 0.94 42 8.49 87.18 19 5.92 Yes 6 2.2 Yes 0 0 No -18 0.87 Yes 52 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16057580 + NM_015164 PLEKHM2 1 0.52 0.74 38 9.38 89.02 27 5.57 Yes 33 1.06 Yes 0 0 No -24 0.69 Yes 44 72.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16058444 + NM_015164 PLEKHM2 1 3.72 3.51 66 8.09 85.84 30 6.39 Yes 69 1.05 Yes 24 0.54 Yes -29 0.51 No 41 57.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 208732330 - NM_001080475 PLEKHM3 1 2.45 0.13 7 3.46 74.76 55 11.75 Yes 33 0.12 No 0 0 No -50 0.42 No 20 69.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 208751426 - NM_001080475 PLEKHM3 1 3.16 0.21 15 11.99 96.04 31 4.57 No 9 0.33 No 0 0 No -30 0.4 No 40 58.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 208766032 - NM_001080475 PLEKHM3 1 2.09 0.14 8 10.64 92.47 18 5.38 No 5 1.67 Yes 27 0.66 Yes -27 0.75 Yes 47 46.5 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 208885413 - NM_001080475 PLEKHM3 1 2.23 0.17 12 11.94 90.15 36 6.2 Yes 61 -2.66 No 0 0 No -36 0.79 Yes 31 67.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 150124952 + NM_001304723 PLEKHO1 1 0.07 0.15 9 6.91 94.15 41 6.62 Yes 64 -3.05 No 40 0.41 Yes -40 0.65 No 30 77.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 150126984 + NM_001304723 PLEKHO1 1 0.04 0.11 7 8.81 90.14 35 5.3 No 1 0.57 No 0 0 No -32 0.44 No 48 47.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 150129052 + NM_001304723 PLEKHO1 1 0.56 2.31 63 6.45 83.29 25 5.6 Yes 12 0.81 Yes 0 0 No -25 0.64 No 45 55.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150129129 + NM_001304723 PLEKHO1 1 0.03 0.11 7 7.04 80.65 30 5.75 Yes 17 0.75 No 0 0 No -29 0.92 Yes 41 94.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 150129565 + NM_001304723 PLEKHO1 1 0.32 1.49 46 0.36 78.45 22 5 No -1 0.22 No 21 0.89 Yes -21 0.8 Yes 49 74.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 65153209 + NM_025201 PLEKHO2 1 0.14 0.18 9 9.97 87.14 21 6.16 Yes 8 2.3 Yes 0 0 No -26 0.41 No 50 64.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 5362082 - NM_018465 PLGRKT 1 0.38 0.38 22 10.13 93.12 25 7.2 Yes 12 0.87 Yes 0 0 No -24 0.88 Yes 46 82.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5382032 - NM_018465 PLGRKT 1 0.77 0.72 33 8.62 95.8 19 5.41 No 6 1 Yes 24 0.66 Yes -18 0.58 No 52 85.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 5382032 - NM_018465 PLGRKT 1 0.79 0.78 32 8.62 95.8 19 5.41 No 6 1 Yes 24 0.66 Yes -18 0.58 No 52 85.36 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 5392650 - NM_018465 PLGRKT 1 0.31 0.33 20 8.16 85.51 23 5.92 Yes 10 1.01 Yes 0 0 No -22 0.9 Yes 48 85.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5419508 - NM_018465 PLGRKT 1 0.18 0.15 9 4.36 69.4 56 7.48 Yes 43 0.02 No 0 0 No -49 0.65 No 21 79.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 5427071 - NM_018465 PLGRKT 1 0.31 0.32 17 7.51 88.27 54 7.92 Yes 12 0.87 Yes 0 0 No -31 0.6 No 39 73.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 5431367 - NM_018465 PLGRKT 1 0.91 0.81 39 5.24 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.7 Yes 51 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 19123475 - NM_001122 PLIN2 1 1.35 3.38 58 4.17 75.3 27 5.28 No 46 0.5 No 26 0.75 Yes -51 0.43 No 19 32.22 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 4839546 - NM_005817 PLIN3 1 3.87 4.08 69 8.67 89.5 30 8.41 Yes 17 1.23 Yes 26 0.88 Yes -29 0.88 Yes 41 95.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 4852278 - NM_005817 PLIN3 1 0.98 0.89 41 2.56 78.69 21 4.88 No 43 -0.6 No 21 0.48 Yes -20 0.52 No 15 64.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 4861412 - NM_005817 PLIN3 1 0.1 0.11 8 4.07 0 15 4.58 No 19 1.82 Yes 0 0 No -31 0.66 Yes 39 89.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 128804420 + NM_001190801 PLK4 1 2.53 1.71 54 1 0 21 6.08 Yes 8 0.3 No 24 0.73 Yes -28 0.66 No 42 75.19 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr4 128804612 + NM_001190801 PLK4 1 0.89 0.68 31 4.11 73.87 29 4.58 No 50 1.02 Yes 0 0 No -21 0.5 No 25 32.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 128808594 + NM_001190801 PLK4 1 2.32 1.76 54 10.46 92.73 27 5.74 Yes 74 0.44 No 0 0 No -23 0.33 No 44 65.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 12010678 + NM_001316320 PLOD1 1 0.15 0.17 9 7.87 83.12 25 8.45 Yes 12 -0.54 No 0 0 No -24 0.93 Yes 46 91.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12014892 + NM_001316320 PLOD1 1 0.2 0.17 8 -2.92 0 10 2.97 No 58 -0.24 No 0 0 No -30 0.92 Yes 40 93.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12017146 + NM_001316320 PLOD1 1 0.12 0.17 11 8.08 77.79 27 6.32 Yes 14 1.39 Yes 26 0.83 Yes -26 0.82 Yes 44 76.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 12017904 + NM_001316320 PLOD1 1 0.17 0.25 12 -1.63 0 11 3.87 No 14 1.7 Yes 0 0 No -26 0.85 Yes 44 86.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12018647 + NM_001316320 PLOD1 1 0.34 0.35 20 9.83 86.23 40 5.93 Yes 27 0.1 No 0 0 No -27 0.54 No 43 58.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 12025591 + NM_001316320 PLOD1 1 0.4 0.44 26 7.93 78.79 38 6.18 Yes 25 0.85 Yes 0 0 No -37 0.46 No 33 45.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 100850949 - NM_001084 PLOD3 1 0.45 0.24 14 -1.05 63 36 5.65 Yes 63 0.77 Yes 0 0 No -21 0.73 Yes 49 32.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 100853924 - NM_001084 PLOD3 1 2.25 0.63 30 5.92 83.94 14 6.3 Yes 41 -1.54 No 0 0 No -33 0.45 No 17 26.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100854208 - NM_001084 PLOD3 1 0.57 0.19 11 2.47 77.77 18 4.83 No 58 -4.02 No 0 0 No -27 0.42 No 53 55.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100855216 - NM_001084 PLOD3 1 0.97 0.42 23 3.59 80.99 25 5 No 24 1.02 Yes 18 0.54 Yes -24 0.89 Yes 46 63.88 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 38125212 - NM_001102560 PLPP5 1 0.66 0.58 28 6.98 80.02 29 6.32 Yes 48 1.6 Yes 0 0 No -28 0.86 Yes 42 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38125251 - NM_001102560 PLPP5 1 0.69 0.6 31 6.63 77.16 47 9.86 Yes 61 1.7 Yes 0 0 No -28 0.72 Yes 18 67.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 38125591 - NM_001102560 PLPP5 1 1.37 1.35 51 7.17 91.56 34 4.57 No 5 1.27 Yes 0 0 No -26 0.72 Yes 44 81.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38125923 - NM_001102560 PLPP5 1 2.05 1.74 57 -0.37 73.27 64 8.07 Yes 15 1.46 Yes 0 0 No -27 0.77 Yes 21 72.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38125926 - NM_001102560 PLPP5 1 2.24 1.85 58 0.04 70.31 61 7.88 Yes 12 1.47 Yes 24 0.88 Yes -24 0.72 Yes 24 61.31 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 38126481 - NM_001102560 PLPP5 1 1.45 1.04 44 6.63 82.99 25 5.2 No 12 1.16 Yes 25 0.68 Yes -24 0.88 Yes 46 90.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 155457893 - NM_001201564 PLRG1 1 0.77 1.63 54 1.88 0 41 6.92 Yes 12 1.33 Yes 0 0 No -24 0.64 No 46 45.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 155459235 - NM_001201564 PLRG1 1 0.39 0.76 36 7.52 84.69 25 5.83 Yes 36 1.17 Yes 24 0.75 Yes -28 0.55 No 46 60.09 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 155462127 - NM_001201564 PLRG1 1 0.32 0.6 31 7.28 92.15 29 4.71 No 4 0.82 Yes 29 0.59 Yes -31 0.49 No 42 48.74 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 146237968 - NM_021105 PLSCR1 1 0.18 0.39 20 8.68 83.84 22 6.8 Yes 9 1.25 Yes 29 0.71 Yes -29 0.25 No 41 51.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 146239489 - NM_021105 PLSCR1 1 0.21 0.42 23 0 0 29 5.79 Yes 55 0.88 Yes 23 0.62 Yes -32 0.45 No 42 59.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 146239769 - NM_021105 PLSCR1 1 0.61 0.86 38 4.09 86.33 10 4.8 No 62 -4.92 No 20 0.49 Yes -20 0.8 Yes 50 86.22 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 146243431 - NM_021105 PLSCR1 1 0.13 0.14 8 2.53 0 41 8.15 Yes 11 0.34 No 0 0 No -30 0.44 No 40 53.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 146244921 - NM_021105 PLSCR1 1 0.31 0.22 14 9.26 87.11 15 5.1 No 69 2.05 Yes 0 0 No -21 0.67 Yes 49 63.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 146251337 - NM_021105 PLSCR1 1 0.05 0.1 7 -13.35 0 36 5.93 Yes 39 1.03 Yes 0 0 No -35 0.54 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 146255832 - NM_021105 PLSCR1 1 1.06 1.79 55 10.43 92.36 30 6.32 Yes 17 1.02 Yes 29 0.79 Yes -29 0.77 Yes 41 78.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 146258968 - NM_021105 PLSCR1 1 0.18 0.32 21 6.51 92.42 25 5.38 No 23 0.5 No 24 0.77 Yes -24 0.87 Yes 46 83.87 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7296298 - NM_020360 PLSCR3 1 0.67 0.25 15 7.11 79.47 28 5.48 No 71 -4.96 No 0 0 No -23 0.85 Yes 47 76.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7297591 - NM_020360 PLSCR3 1 40.19 3.74 68 -5.86 74.14 22 7.07 Yes 9 1.59 Yes 18 0.9 Yes -21 0.91 Yes 49 95.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 44538802 - NM_001242921 PLTP 1 10.22 0.71 33 8.19 86.24 26 6.22 Yes 13 0.53 No 0 0 No -25 0.91 Yes 45 92.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 126725834 + NM_032242 PLXNA1 1 0.28 0.13 7 5.43 76.65 33 6.24 Yes -4 1.19 Yes 0 0 No -32 0.74 Yes 38 85.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 126749097 + NM_032242 PLXNA1 1 1.2 0.4 21 -3.2 0 20 3.41 No 24 0.9 Yes 0 0 No -36 0.95 Yes 34 93.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153691754 + NM_017514 PLXNA3 1 0.88 0.17 11 4.02 83.94 24 5.48 No 29 -3.26 No 0 0 No -23 0.87 Yes 47 90.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153693018 + NM_017514 PLXNA3 1 2.02 0.36 18 10.07 87.65 50 6.93 Yes 37 2.11 Yes 0 0 No -23 0.77 Yes 47 73.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153694089 + NM_017514 PLXNA3 1 4.67 0.9 48 5.13 76.68 34 6.73 Yes 21 1.42 Yes 0 0 No -22 0.82 Yes 37 57.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 153695019 + NM_017514 PLXNA3 1 5.43 0.81 40 3.17 70.16 25 7.07 Yes 12 1.63 Yes 0 0 No -29 0.71 Yes 46 85.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153695023 + NM_017514 PLXNA3 1 16.34 2.18 61 -0.91 0 29 7.34 Yes 16 1.62 Yes 0 0 No -28 0.82 Yes 42 82.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153695064 + NM_017514 PLXNA3 1 3.11 0.4 24 2.54 75.54 20 6.77 Yes -2 1.64 Yes 0 0 No -19 0.77 Yes 51 68.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 153697213 + NM_017514 PLXNA3 1 0.48 0.1 7 2 67.91 18 6.48 Yes 5 -1.34 No 0 0 No -25 0.71 Yes 53 52.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153697759 + NM_017514 PLXNA3 1 0.83 0.25 13 9.18 86.17 19 6 Yes 6 0.74 No 0 0 No -21 0.71 Yes 49 65.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153698119 + NM_017514 PLXNA3 1 1.8 0.33 17 6.12 76.63 38 7.43 Yes 8 1.34 Yes 0 0 No -28 0.38 No 42 40.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153698390 + NM_017514 PLXNA3 1 0.74 0.22 13 3.25 79.13 42 6.15 Yes 29 1.22 Yes 0 0 No -28 0.96 Yes 42 85.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153699198 + NM_017514 PLXNA3 1 0.31 0.1 7 6.48 78.31 31 6.08 Yes 18 0.42 No 0 0 No -30 0.85 Yes 40 82.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 153699224 + NM_017514 PLXNA3 1 1.69 0.39 22 6.12 77.78 29 5.39 No 44 0.39 No 0 0 No -22 0.52 No 50 37.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 153699819 + NM_017514 PLXNA3 1 2.03 0.53 27 0.98 0 11 4.25 No -2 0.19 No 25 0.76 Yes -34 0.63 No 36 27.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 153700901 + NM_017514 PLXNA3 1 0.58 0.1 7 3.74 82.94 13 4.9 No 58 -3.8 No 20 0.66 Yes -17 0.62 No 53 45.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 48448148 - NM_002673 PLXNB1 1 4.69 0.81 33 9.55 89.5 18 6.68 Yes 5 0.82 Yes 0 0 No -35 0.8 Yes 35 72.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48451793 - NM_002673 PLXNB1 1 2.99 0.53 26 -5.41 0 16 4.36 No 64 -5.15 No 18 0.84 Yes -15 0.64 No 55 43.3 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 48461084 - NM_002673 PLXNB1 1 14.03 1.26 38 9.31 85.59 37 7.62 Yes 24 1.83 Yes 36 0.83 Yes -36 0.87 Yes 34 85.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48463634 - NM_002673 PLXNB1 1 1.5 0.22 13 5.17 82.06 31 6.06 Yes 18 -1.49 No 21 0.84 Yes -30 0.68 Yes 40 78.39 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48463853 - NM_002673 PLXNB1 1 0.86 0.18 12 2.47 79.79 24 5 No 11 -0.19 No 24 0.62 Yes -23 0.87 Yes 47 91.88 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50714351 - NM_012401 PLXNB2 1 0.05 0.15 10 3.29 72.47 52 6.33 Yes 50 2.2 Yes 0 0 No -24 0.46 No 46 39.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50714618 - NM_012401 PLXNB2 1 0.4 1.06 45 7.56 73.75 32 6 Yes 19 1.2 Yes 0 0 No -31 0.95 Yes 39 96.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50714657 - NM_012401 PLXNB2 1 1.02 2.97 58 8.86 75.83 33 6.08 Yes NA NA NA 0 0 No -32 0.59 No 40 68.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50714737 - NM_012401 PLXNB2 1 0.19 0.56 29 0.86 0 33 6.08 Yes NA NA NA 0 0 No -30 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50716201 - NM_012401 PLXNB2 1 0.69 1.69 52 0.24 66.87 35 5.83 Yes 22 0.78 Yes 22 0.88 Yes -34 0.89 Yes 36 62.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 50716407 - NM_012401 PLXNB2 1 0.15 0.39 23 3.71 81.66 12 5.48 No 42 1.24 Yes 0 0 No -26 0.89 Yes 44 74.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50717363 - NM_012401 PLXNB2 1 1.26 4.78 63 7.14 80.6 15 5.48 No 2 1.26 Yes 0 0 No -21 0.91 Yes 49 87.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50718201 - NM_012401 PLXNB2 1 0.07 0.13 8 1.19 0 37 6 Yes 24 2.47 Yes 0 0 No -32 0.56 No 34 63.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50719296 - NM_012401 PLXNB2 1 1.45 4.72 66 7.73 78.25 27 6.64 Yes NA NA NA 0 0 No -26 0.73 Yes 40 54.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50719414 - NM_012401 PLXNB2 1 0.17 0.56 29 -0.52 73.51 19 5 No 22 -2.7 No 18 0.94 Yes -7 0.26 No 63 35.86 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50719616 - NM_012401 PLXNB2 1 0.04 0.11 7 -9.24 68.87 27 5.48 No 50 -3.15 No 0 0 No -23 0.53 No 47 41.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50719702 - NM_012401 PLXNB2 1 0.08 0.25 15 7.31 79.03 55 7.51 Yes 42 1.79 Yes 0 0 No -18 0.7 Yes 52 68.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 50720139 - NM_012401 PLXNB2 1 0.28 0.76 29 -0.41 77.37 22 4.9 No 46 1.31 Yes 0 0 No -21 0.47 No 12 37.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50720759 - NM_012401 PLXNB2 1 0.2 0.42 22 -6.92 0 12 4.23 No 58 -2.87 No 22 0.77 Yes -16 0.56 No 38 24.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50720980 - NM_012401 PLXNB2 1 0.09 0.21 10 3.62 76.38 13 4.96 No 71 -3.08 No 0 0 No -23 0.9 Yes 47 94.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50721613 - NM_012401 PLXNB2 1 0.13 0.5 24 6.34 80.01 31 5.66 Yes 18 1.27 Yes 0 0 No -30 0.95 Yes 40 97.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50722389 - NM_012401 PLXNB2 1 0.25 0.88 34 6.88 84.46 30 6.32 Yes 38 1.76 Yes 0 0 No -29 0.68 Yes 41 83.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50722432 - NM_012401 PLXNB2 1 0.03 0.11 8 -0.7 66.36 15 5.74 Yes 2 0.27 No 19 0.96 Yes -14 0.36 No 63 21.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50722670 - NM_012401 PLXNB2 1 0.06 0.18 12 -7.64 0 36 7.48 Yes 23 1.69 Yes 24 0.81 Yes -35 0.88 Yes 35 85.27 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50722674 - NM_012401 PLXNB2 1 1.57 4.72 68 5.65 77.11 32 7.21 Yes 19 1.69 Yes 31 0.9 Yes -31 0.88 Yes 39 88.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50723035 - NM_012401 PLXNB2 1 0.57 1.33 49 3.64 77.46 22 4.89 No -3 0.93 Yes 0 0 No -21 0.93 Yes 49 76.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50723343 - NM_012401 PLXNB2 1 1.88 4.46 65 4.25 76.67 25 5.03 No 40 -3.11 No 24 0.84 Yes -24 0.87 Yes 46 69.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50724939 - NM_012401 PLXNB2 1 0.04 0.13 8 -2.83 0 20 3.75 No 62 -4.93 No 0 0 No -18 0.35 No 63 25.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50725036 - NM_012401 PLXNB2 1 0.04 0.14 7 0.43 74.05 19 4.58 No 14 0.15 No 0 0 No -19 0.79 Yes 51 59.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50725688 - NM_012401 PLXNB2 1 0.17 0.25 15 1.37 0 9 3.87 No 16 0.18 No 0 0 No -28 0.89 Yes 42 74.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50733206 - NM_012401 PLXNB2 1 1.04 0.43 19 0.02 78.08 29 7.35 Yes 16 1.62 Yes 0 0 No -28 0.94 Yes 42 95.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50733859 - NM_012401 PLXNB2 1 112.77 35.72 72 10.69 84.8 24 5.92 Yes 11 1.49 Yes 0 0 No -23 0.96 Yes 47 96.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50734822 - NM_012401 PLXNB2 1 1.05 0.31 20 7.36 77.17 32 6.28 Yes 53 0.94 Yes 0 0 No -26 0.52 No 44 55.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50734994 - NM_012401 PLXNB2 1 1.41 0.54 25 7.88 91.86 26 5.1 No 13 -0.09 No 0 0 No -25 0.65 No 45 46.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50739855 - NM_012401 PLXNB2 1 1.22 0.38 21 4.24 74.86 25 5.27 No 30 1.93 Yes 0 0 No -24 0.89 Yes 46 90.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50743405 - NM_012401 PLXNB2 1 1.11 0.39 21 7.79 82.39 34 4.18 No 21 1.36 Yes 0 0 No -24 0.66 Yes 46 74.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94562932 + NM_005761 PLXNC1 1 0.2 0.11 8 -4.75 0 47 7.61 Yes 69 1.02 Yes 0 0 No -46 0.69 Yes 24 70.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94580666 + NM_005761 PLXNC1 1 0.68 0.38 16 10.4 87.02 42 5.54 No 44 0.53 No 0 0 No -22 0.65 No 39 58.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 94603610 + NM_005761 PLXNC1 1 0.29 0.18 12 2.63 75.37 21 4.99 No 57 1.05 Yes 0 0 No -24 0.77 Yes 46 74.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94603641 + NM_005761 PLXNC1 1 0.26 0.13 9 -0.89 0 13 4.35 No 39 0.5 No 0 0 No -22 0.68 Yes 48 62.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 94617945 + NM_005761 PLXNC1 1 0.53 0.29 13 9.54 90.9 21 6.27 Yes 60 -1.55 No 0 0 No -30 0.56 No 50 74.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 94620906 + NM_005761 PLXNC1 1 0.71 0.54 29 2.91 74.14 72 10.24 Yes 59 1.14 Yes 21 0.87 Yes -22 0.54 No 35 65.35 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 94620930 + NM_005761 PLXNC1 1 0.15 0.1 7 -1.26 0 14 3.87 No 15 0.2 No 0 0 No -27 0.87 Yes 43 76.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 94621438 + NM_005761 PLXNC1 1 4.04 2.39 61 8.21 86.5 35 7.35 Yes 22 2.29 Yes 0 0 No -34 0.89 Yes 36 94.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94643029 + NM_005761 PLXNC1 1 0.14 0.11 7 7.49 86.91 24 3.83 No 51 1.25 Yes 0 0 No -26 0.57 No 44 67.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 94649679 + NM_005761 PLXNC1 1 0.57 0.42 21 7.94 88.11 20 5.88 Yes 3 0.87 Yes 27 0.77 Yes -19 0.73 Yes 51 64.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 94653116 + NM_005761 PLXNC1 1 0.52 0.32 20 4.71 0 29 5.17 No 13 0.33 No 0 0 No -28 0.52 No 42 73.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 94658857 + NM_005761 PLXNC1 1 1.32 0.56 30 -9.98 78.22 30 6.4 Yes 17 1.97 Yes 0 0 No -29 0.94 Yes 41 96.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 94659275 + NM_005761 PLXNC1 1 0.61 0.39 25 4.11 83.09 27 5.28 No -4 0.15 No 0 0 No -26 0.86 Yes 44 79.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 94682048 + NM_005761 PLXNC1 1 1.58 0.78 40 4.65 86.69 18 7.54 Yes 5 1.53 Yes 0 0 No -25 0.59 No 47 57.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 94682051 + NM_005761 PLXNC1 1 3.48 1.63 55 4.5 84.65 21 7.74 Yes 8 1.55 Yes 0 0 No -28 0.57 No 44 55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 94682324 + NM_005761 PLXNC1 1 1.03 0.47 24 7.15 87.16 26 5.88 Yes 45 -3.05 No 0 0 No -18 0.55 No 52 67.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 94688470 + NM_005761 PLXNC1 1 0.61 0.33 18 8.96 87.85 19 4.73 No 0 0.71 No 0 0 No -27 0.73 Yes 43 77.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 89858243 + NM_001010853 PM20D2 1 4.59 1.07 43 9.19 85.01 23 5.29 No 10 0.55 No 0 0 No -30 0.59 No 47 72.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 89861504 + NM_001010853 PM20D2 1 0.34 0.25 13 6.92 78.94 43 7.78 Yes 20 0.62 No 0 0 No -42 0.31 No 33 55.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 89871123 + NM_001010853 PM20D2 1 0.43 0.26 17 6.1 89.72 20 6.08 Yes 7 1.37 Yes 0 0 No -19 0.59 No 51 71.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 89871127 + NM_001010853 PM20D2 1 0.24 0.11 7 -1.96 0 24 6.4 Yes 11 1.33 Yes 0 0 No -23 0.69 Yes 47 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89871424 + NM_001010853 PM20D2 1 0.78 0.47 24 11.21 91.89 25 6 Yes 12 1.27 Yes 0 0 No -24 0.96 Yes 46 94.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 57567659 + NM_021127 PMAIP1 1 1.38 7.47 71 8.78 89.19 28 5.48 No 27 -1.88 No 27 0.51 Yes -25 0.61 No 45 40.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 57569880 + NM_021127 PMAIP1 1 0.05 0.26 16 0.05 76.8 30 7.33 Yes 17 1.15 Yes 0 0 No -29 0.91 Yes 41 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156206033 + NM_001199654 PMF1 1 0.1 0.25 16 3.18 80.74 17 5.29 No 4 1.11 Yes 0 0 No -22 0.51 No 54 52.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 74291490 + NM_033238 PML 1 0.1 0.19 9 12.92 87.95 34 8.48 Yes 21 1.72 Yes 0 0 No -33 0.65 No 37 83.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 74317761 + NM_033238 PML 1 0.31 0.4 19 14.48 88.33 37 6.16 Yes 24 -0.9 No 0 0 No -20 0.45 No 45 67.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 74317926 + NM_033238 PML 1 2.94 3.63 71 8.26 86.93 22 6.93 Yes 9 1.26 Yes 0 0 No -21 0.89 Yes 49 87.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74318532 + NM_033238 PML 1 0.65 0.88 30 10.64 87.01 38 6.97 Yes 25 2.3 Yes 0 0 No -37 0.85 Yes 33 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74327472 + NM_033238 PML 1 3.25 3.03 64 -6.49 65.08 27 5.57 Yes 49 -3.59 No 26 0.82 Yes -26 0.44 No 44 33.02 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 74327483 + NM_033238 PML 1 6.14 5.67 72 3.23 0 14 4.47 No 1 0.89 Yes 26 0.82 Yes -13 0.21 No 47 37.75 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 74327512 + NM_033238 PML 1 49.5 46.01 72 -0.04 66.03 19 4.61 No 30 0.92 Yes 24 0.91 Yes -24 0.77 Yes 46 83.11 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 74336566 + NM_033238 PML 1 6.79 2.13 57 1.12 0 30 6.9 Yes 17 1.93 Yes 0 0 No -29 0.95 Yes 41 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41973379 - NM_002676 PMM1 1 0.59 0.38 18 8.02 87.68 21 5 No 38 -2.36 No 0 0 No -18 0.68 Yes 52 77.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 41985168 - NM_002676 PMM1 1 5.92 1 42 9.09 81.17 35 4.44 No 22 1.25 Yes 34 0.8 Yes -20 0.48 No 46 62.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 8895937 + NM_000303 PMM2 1 0.25 0.35 11 5.75 84.23 88 10.08 Yes 75 1.25 Yes 29 0.08 Yes -39 0.52 No 39 58.66 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 8896117 + NM_000303 PMM2 1 0.6 0.85 36 7.9 82.88 19 5.58 Yes 39 1.36 Yes 30 0.68 Yes -30 0.62 No 40 65.01 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 8896146 + NM_000303 PMM2 1 0.17 0.21 14 5.04 68.53 34 6.14 Yes 9 1.88 Yes 33 0.92 Yes -33 0.78 Yes 37 85.15 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 8898653 + NM_000303 PMM2 1 0.14 0.17 10 6.16 88.86 25 6.2 Yes 43 1.12 Yes 0 0 No -24 0.68 Yes 46 64.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 8905498 + NM_000303 PMM2 1 0.31 0.53 26 -1.11 0 30 6.52 Yes 76 0.43 No 26 0.57 Yes -30 0.47 No 41 57.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 8907240 + NM_000303 PMM2 1 0.11 0.18 11 8.07 86.27 56 6.46 Yes 34 0.92 Yes 0 0 No -28 0.82 Yes 42 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 8908778 + NM_000303 PMM2 1 0.25 0.42 18 10.39 86.42 29 5.48 No 16 0.77 Yes 0 0 No -28 0.88 Yes 42 85.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 8909097 + NM_000303 PMM2 1 0.07 0.15 9 2 88.27 43 8.43 Yes 45 1.04 Yes 0 0 No -32 0.56 No 38 82.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 8912641 + NM_000303 PMM2 1 0.05 0.13 9 6.59 85.42 27 4.47 No 2 0.3 No 0 0 No -26 0.77 Yes 44 87.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 8923049 + NM_000303 PMM2 1 0.09 0.17 9 4.35 84.31 24 5.13 No 11 0.39 No 23 0.93 Yes -23 0.95 Yes 47 95.76 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 8925977 + NM_000303 PMM2 1 0.55 1.24 45 9.05 86.2 30 5.26 No 1 0.59 No 0 0 No -29 0.86 Yes 41 92.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139309006 + NM_015160 PMPCA 1 0.19 0.26 14 -1.7 79.5 25 6.58 Yes 42 -2.49 No 0 0 No -24 0.76 Yes 46 69.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 139311451 + NM_015160 PMPCA 1 0.41 0.78 34 10.45 87.95 19 6 Yes 65 0.97 Yes 0 0 No -31 0.56 No 39 65.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139315445 + NM_015160 PMPCA 1 0.19 0.39 22 9.4 91.97 24 4.82 No 51 -2.45 No 0 0 No -23 0.7 Yes 44 75.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139317240 + NM_015160 PMPCA 1 0.07 0.15 9 8.03 97.69 53 8.83 Yes 40 1.89 Yes 0 0 No -52 0.85 Yes 18 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139317557 + NM_015160 PMPCA 1 0.09 0.17 11 -9.08 0 9 4.44 No 23 1.04 Yes 0 0 No -35 0.93 Yes 35 86.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 102944294 + NM_004279 PMPCB 1 0.29 0.83 36 0.75 0 13 3.79 No 75 0.25 No 0 0 No -25 0.83 Yes 45 78.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 102944432 + NM_004279 PMPCB 1 1.28 3.54 69 6.24 84.38 36 6 Yes 6 0.23 No 18 0.17 Yes -33 0.67 Yes 35 74.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 102946849 + NM_004279 PMPCB 1 0.26 0.74 40 4.74 84.41 26 5.66 Yes 13 1.25 Yes 0 0 No -25 0.71 Yes 45 86.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 102950103 + NM_004279 PMPCB 1 0.05 0.13 9 6.45 89.01 28 5.83 Yes 55 -4.21 No 0 0 No -27 0.65 No 46 73.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 102952275 + NM_004279 PMPCB 1 0.04 0.15 9 1.97 71.26 27 5.1 No 50 0.8 Yes 0 0 No -26 0.45 No 20 69.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 102952664 + NM_004279 PMPCB 1 0.05 0.19 9 -2.85 0 20 4.46 No 20 1.46 Yes 0 0 No -32 0.46 No 38 65.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190658865 + NR_110332 PMS1 1 0.31 0.31 18 0.24 0 34 7.11 Yes 70 1.15 Yes 0 0 No -34 0.65 No 36 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190659574 + NR_110332 PMS1 1 0.15 0.13 8 2.04 76.91 45 6.3 Yes 16 0.48 No 0 0 No -28 0.63 No 42 51.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190670360 + NR_110332 PMS1 1 0.11 0.15 8 -2.28 0 19 4.24 No 6 0.21 No 22 0.8 Yes -18 0.73 Yes 52 54.66 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 190671148 + NR_110332 PMS1 1 1.3 1.18 42 2.13 0 47 8.87 Yes 34 1.11 Yes 39 0.79 Yes -39 0.74 Yes 31 92.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 190674747 + NR_110332 PMS1 1 3.27 2.92 69 8.85 82.21 24 8.38 Yes 11 0.63 No 0 0 No -23 0.59 No 31 62.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190676566 + NR_110332 PMS1 1 2.48 2.22 60 9.01 87.72 26 5.09 No 13 0.34 No 0 0 No -26 0.79 Yes 44 78.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190680286 + NR_110332 PMS1 1 0.33 0.32 20 1.86 67.81 27 5.61 Yes 14 1.58 Yes 0 0 No -26 0.95 Yes 44 90.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190681767 + NR_110332 PMS1 1 1.33 1.24 51 4.23 93.74 25 4.9 No 12 0.4 No 0 0 No -24 0.91 Yes 46 93.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190718654 + NR_110332 PMS1 1 0.42 0.46 25 2.34 0 34 7.66 Yes 62 0.58 No 33 0.4 Yes -28 0.47 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 190720554 + NR_110332 PMS1 1 0.17 0.19 10 6.35 76.46 29 7.47 Yes 8 0.28 No 23 0.49 Yes -26 0.51 No 44 70.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 6017346 - NM_001322008 PMS2 1 0.93 0.61 34 4.17 71.21 32 4 No 10 1.19 Yes 22 0.88 Yes -22 0.54 No 48 67.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 6017346 - NM_001322008 PMS2 1 0.33 0.22 15 4.17 71.21 32 4 No 10 1.19 Yes 22 0.88 Yes -22 0.54 No 48 67.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 6017422 - NM_001322008 PMS2 1 1.02 0.76 33 -2.52 67.18 17 5.16 No 33 0.41 No 31 0.77 Yes -21 0.66 No 49 69.78 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 6027291 - NM_001322008 PMS2 1 0.14 0.11 8 10.87 89.84 29 5.3 No 74 0.87 Yes 28 0.93 Yes -28 0.87 Yes 42 87.15 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 6031467 - NM_001322008 PMS2 1 0.52 0.26 15 2.82 83.78 33 5.27 No 20 0.62 No 0 0 No -32 0.74 Yes 38 81.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6035021 - NM_001322008 PMS2 1 1.51 1.15 45 7.26 86.67 28 6.99 Yes 75 1.03 Yes 0 0 No -28 0.55 No 42 67.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6038855 - NM_001322008 PMS2 1 0.53 0.29 17 5.2 87.25 27 6.32 Yes 73 0.52 No 0 0 No -26 0.94 Yes 44 95.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6038858 - NM_001322008 PMS2 1 2.92 1.53 55 5.83 83.43 24 6.08 Yes 70 0.52 No 0 0 No -23 0.95 Yes 47 95.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6039838 - NM_001322008 PMS2 1 0.2 0.1 7 7.58 87.64 20 7.14 Yes 7 1.28 Yes 0 0 No -19 0.84 Yes 51 91.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6040622 - NM_001322008 PMS2 1 1.19 0.61 30 11.48 87.15 24 6.23 Yes 11 1.59 Yes 0 0 No -23 0.75 Yes 47 90.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6779804 + NR_002217 PMS2CL 1 11.9 1.18 43 6.62 85.02 26 4.67 No 48 0.8 Yes 23 0.67 Yes -23 0.84 Yes 47 89.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 6786633 + NR_002217 PMS2CL 1 0.73 0.21 14 -2.52 67.18 17 5.16 No 33 0.41 No 31 0.76 Yes -21 0.66 No 49 69.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 6786709 + NR_002217 PMS2CL 1 2.33 0.68 32 4.17 71.21 32 4 No 10 1.19 Yes 0 0 No -22 0.54 No 48 67.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 99923492 - NR_003613 PMS2P1 1 5.09 3.57 68 7.05 75.56 28 7.51 Yes 15 2.14 Yes 0 0 No -27 0.85 Yes 43 90.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99923492 - NR_003613 PMS2P1 1 0.19 0.13 8 7.05 75.56 28 7.51 Yes 15 2.14 Yes 0 0 No -27 0.85 Yes 43 90.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99926818 - NR_003613 PMS2P1 1 0.59 0.51 27 11.01 79.63 13 5.79 Yes 0 1.49 Yes 0 0 No -27 0.91 Yes 43 87.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99928585 - NR_003613 PMS2P1 1 0.22 0.26 15 5.17 73.34 36 5.93 Yes 23 1.62 Yes 0 0 No -25 0.62 No 45 75.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 99928753 - NR_003613 PMS2P1 1 0.09 0.11 8 6.5 86.2 22 7.65 Yes 9 1 Yes 0 0 No -21 0.78 Yes 49 78.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99930200 - NR_003613 PMS2P1 1 25.07 14.51 72 0.87 0 42 6.99 Yes 7 1.48 Yes 0 0 No -41 0.36 No 36 48.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 99933052 - NR_003613 PMS2P1 1 3.8 2.22 57 8.06 87.15 90 7.38 Yes 11 0.58 No 0 0 No -23 0.63 No 47 44.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 75140612 - NR_028059 PMS2P3 1 8.19 2.17 59 11.01 79.63 13 5.79 Yes 0 1.49 Yes 0 0 No -27 0.91 Yes 43 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75140612 - NR_028059 PMS2P3 1 1.33 0.36 22 11.01 79.63 13 5.79 Yes 0 1.49 Yes 0 0 No -27 0.91 Yes 43 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75141736 - NR_028059 PMS2P3 1 2.1 0.56 35 4.14 0 20 4.05 No 7 0.32 No 0 0 No -19 0.78 Yes 51 81.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 75144105 - NR_028059 PMS2P3 1 6.12 1.89 56 1.29 0 40 6.9 Yes 5 1.21 Yes 34 0.72 Yes -39 0.42 No 38 61.63 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 75155337 - NR_028059 PMS2P3 1 7.16 0.65 29 5.84 94.81 26 5 No 43 1.12 Yes 25 0.85 Yes -25 0.69 Yes 45 78.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 75155356 - NR_028059 PMS2P3 1 3.03 0.21 13 6.43 80.97 28 5.79 Yes 24 1.11 Yes 25 0.85 Yes -27 0.67 Yes 38 64.86 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 66759452 - NR_022007 PMS2P4 1 0.91 0.31 17 10.28 86.73 23 6.14 Yes 4 1.3 Yes 0 0 No -22 0.75 Yes 48 88.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66760964 - NR_022007 PMS2P4 1 2.28 0.88 32 9.59 78.49 28 5.83 Yes 76 -2.41 No 0 0 No -27 0.91 Yes 43 86.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 66762037 - NR_022007 PMS2P4 1 2.08 0.81 36 6.25 87.91 17 4.8 No 4 0.07 No 21 0.87 Yes -21 0.6 No 49 61.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 66764407 - NR_022007 PMS2P4 1 14.37 2.86 67 1.29 0 40 6.9 Yes 5 1.21 Yes 0 0 No -39 0.42 No 38 61.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 74307374 + NR_027777 PMS2P5 1 20 2.94 63 8.28 87.15 24 8.25 Yes 11 0.59 No 23 0.8 Yes -23 0.59 No 47 45.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 74310237 + NR_027777 PMS2P5 1 24.06 3.36 70 0.87 0 42 6.99 Yes 7 1.48 Yes 0 0 No -41 0.36 No 36 48.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72483445 + NR_130940 PMS2P7 1 1.02 0.1 7 11.01 79.63 13 5.79 Yes 0 1.49 Yes 0 0 No -27 0.91 Yes 43 87.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 76671546 + NR_028058 PMS2P9 1 2.65 0.24 13 6.25 87.91 17 4.8 No 4 0.07 No 19 0.86 Yes -21 0.55 No 49 72.2 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 154901534 - NM_001323012 PMVK 1 0.04 0.1 7 7.96 93.72 20 4.69 No 7 1.77 Yes 0 0 No -19 0.88 Yes 51 95.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154901632 - NM_001323012 PMVK 1 0.08 0.21 9 3.82 80.88 10 5.2 No 35 1.08 Yes 0 0 No -47 0.28 No 23 57.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154901650 - NM_001323012 PMVK 1 0.2 0.54 29 -14.45 65.14 30 5.61 Yes 17 1.08 Yes 0 0 No -29 0.58 No 41 70.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 154901708 - NM_001323012 PMVK 1 0.3 0.83 36 8.82 83 26 4.65 No 51 -3.12 No 0 0 No -25 0.79 Yes 45 69.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154910662 - NM_001323012 PMVK 1 0.55 0.15 10 6.6 79.15 21 5.17 No 8 1.98 Yes 0 0 No -20 0.43 No 50 58.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 99848188 - NM_001322408 PNISR 1 0.57 0.96 39 12.76 91.56 28 6.22 Yes 15 0.5 No 27 0.65 Yes -34 0.37 No 36 62.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 99849504 - NM_001322408 PNISR 1 0.39 0.65 33 2.36 78.68 30 6 Yes 17 0.44 No 0 0 No -29 0.96 Yes 41 97.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 99851772 - NM_001322408 PNISR 1 0.13 0.17 11 0.77 0 21 7.31 Yes 8 1.05 Yes 33 0.86 Yes -20 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 99854040 - NM_001322408 PNISR 1 0.08 0.18 11 -0.76 0 38 8.12 Yes 47 -2.86 No 25 0.36 Yes -27 0.48 No 43 65.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 99857163 - NM_001322408 PNISR 1 1.13 2.19 56 5.57 80.7 22 5.86 Yes 9 0.22 No 0 0 No -21 0.85 Yes 49 62.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 99858802 - NM_001322408 PNISR 1 1.17 1.65 57 7.53 80.33 21 4.82 No 66 1.33 Yes 0 0 No -27 0.78 Yes 43 47.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 99860195 - NM_001322408 PNISR 1 10.62 15 72 8.53 86.74 28 5.52 No 21 1.21 Yes 27 0.77 Yes -27 0.74 Yes 43 67.55 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr6 99860611 - NM_001322408 PNISR 1 0.22 0.46 26 -2.68 0 29 5.46 No 37 1.16 Yes 0 0 No -28 0.54 No 42 61.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 219136146 + NM_015488 PNKD 1 3.05 2.42 59 4.81 87.43 20 4.8 No 54 2.27 Yes 0 0 No -19 0.9 Yes 51 94.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219206265 + NM_015488 PNKD 1 1.79 0.5 25 -4.6 0 13 4.11 No 59 -0.87 No 0 0 No -30 0.5 No 30 68.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 219209213 + NM_015488 PNKD 1 0.75 0.38 21 2.16 86.44 25 5 No 21 -2.34 No 0 0 No -23 0.55 No 47 48.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 219209213 + NM_015488 PNKD 1 2.06 1.21 48 2.16 86.44 25 5 No 21 -2.34 No 0 0 No -23 0.55 No 47 48.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50364619 - NM_007254 PNKP 1 1.16 0.65 32 -7.14 0 41 5.91 Yes 12 1.68 Yes 0 0 No -24 0.92 Yes 46 81.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50364728 - NM_007254 PNKP 1 0.29 0.14 8 5.36 79.24 29 6.32 Yes 65 1.9 Yes 0 0 No -28 0.85 Yes 42 83.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50365392 - NM_007254 PNKP 1 0.51 0.31 20 4.28 70.29 20 5.1 No 35 0.62 No 22 0.74 Yes -47 0.48 No 51 75.54 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 50365495 - NM_007254 PNKP 1 0.58 0.46 26 3.4 0 28 5.83 Yes 56 1.34 Yes 18 0.87 Yes -27 0.94 Yes 43 82.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50368500 - NM_007254 PNKP 1 1.05 0.53 27 6.19 71.66 40 4.55 No 64 -0.45 No 0 0 No -28 0.61 No 44 37.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50368558 - NM_007254 PNKP 1 0.44 0.17 9 -10.38 55.3 37 7.69 Yes 6 0.91 Yes 0 0 No -18 0.51 No 34 43.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 50368560 - NM_007254 PNKP 1 1.69 0.71 33 -0.71 63.12 35 7.6 Yes 4 1.01 Yes 0 0 No -16 0.4 No 36 43.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 50368711 - NM_007254 PNKP 1 0.36 0.15 9 -6.83 0 20 5.57 Yes 41 1.05 Yes 23 0.83 Yes -53 0.7 Yes 17 30.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 50369762 - NM_007254 PNKP 1 0.41 0.17 11 -0.61 75.55 21 4.8 No 41 0.54 No 0 0 No -20 0.51 No 50 49.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50369786 - NM_007254 PNKP 1 14.18 5.49 71 4.12 67.78 30 6.56 Yes 17 0.57 No 18 0.69 Yes -29 0.23 No 41 50.69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 39646800 + NM_002687 PNN 1 0.82 2.74 65 1.25 0 24 4.75 No 11 0.81 Yes 0 0 No -23 0.57 No 43 65.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 39648300 + NM_002687 PNN 1 0.03 0.1 7 -5.87 0 15 3.84 No 63 0.2 No 0 0 No -28 0.73 Yes 42 32.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 39648531 + NM_002687 PNN 1 0.07 0.19 10 -2.54 0 25 6.16 Yes 12 2.55 Yes 0 0 No -24 0.91 Yes 46 84.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39648574 + NM_002687 PNN 1 0.04 0.11 7 -2.28 59.34 26 5.93 Yes 55 2.48 Yes 0 0 No -25 0.59 No 45 22.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 68389350 + NM_020143 PNO1 1 0.07 0.18 8 11.39 95.31 13 5.83 Yes 23 -1.49 No 0 0 No -29 0.68 Yes 41 80.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 68392069 + NM_020143 PNO1 1 1.99 3.82 67 5.05 77.95 22 5.17 No 9 0.48 No 0 0 No -26 0.9 Yes 44 94.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 68400483 + NM_020143 PNO1 1 0.08 0.14 9 0.18 0 31 6.7 Yes 18 1.57 Yes 0 0 No -30 0.8 Yes 40 94.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 28197486 + NM_001284244 PNOC 1 0.15 0.1 7 9.67 85.4 25 6.31 Yes 12 1.49 Yes 0 0 No -24 0.87 Yes 46 93.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 20943825 + NM_000270 PNP 1 0.04 0.11 7 4.04 85.02 17 6.92 Yes 60 1.39 Yes 0 0 No -29 0.43 No 40 55.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 20944152 + NM_000270 PNP 1 0.15 0.35 20 10.28 79.59 30 5.65 Yes 59 0.21 No 0 0 No -25 0.64 No 45 69.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 821740 + NM_020376 PNPLA2 1 0.95 0.32 18 3.34 83.15 22 4.69 No 24 -0.89 No 20 0.89 Yes -21 0.84 Yes 41 33.35 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 822498 + NM_020376 PNPLA2 1 0.35 0.28 17 7.44 84.79 15 5 No 2 1.03 Yes 0 0 No -42 0.64 No 56 36.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 7870180 - NM_004650 PNPLA4 1 0.8 0.43 26 -1.19 74.48 27 5.29 No 14 1.76 Yes 0 0 No -26 0.87 Yes 44 95.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 7887026 - NM_004650 PNPLA4 1 0.2 0.11 8 8.05 84.66 12 5.29 No 53 0.97 Yes 0 0 No -25 0.89 Yes 45 84.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7607658 + NM_001166114 PNPLA6 1 0.38 0.29 18 0.22 0 15 4.55 No 2 0.76 No 0 0 No -31 0.37 No 39 34.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 7607961 + NM_001166114 PNPLA6 1 0.12 0.14 9 5.09 86.61 27 5.15 No 76 0.86 Yes 0 0 No -26 0.4 No 45 44.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7615170 + NM_001166114 PNPLA6 1 0.52 0.43 23 7.2 76.1 24 5.48 No 11 0.21 No 21 0.88 Yes -23 0.87 Yes 47 86.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 7615406 + NM_001166114 PNPLA6 1 0.34 0.19 14 -1.64 0 23 6.32 Yes 10 2.29 Yes 0 0 No -22 0.64 No 48 73.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 7615850 + NM_001166114 PNPLA6 1 0.37 0.31 16 0.79 69.63 15 7.17 Yes 2 0.93 Yes 28 0.54 Yes -29 0.44 No 41 71.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 7615853 + NM_001166114 PNPLA6 1 0.5 0.36 22 3.3 70.38 18 7.38 Yes 5 0.95 Yes 28 0.54 Yes -32 0.44 No 38 69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 7618757 + NM_001166114 PNPLA6 1 80.56 46.11 72 3.44 69.8 18 6.61 Yes 73 -2.48 No 29 0.45 Yes -29 0.54 No 41 70.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr19 7620163 + NM_001166114 PNPLA6 1 1.13 0.75 37 -1.25 0 20 4.08 No 52 0.65 No 0 0 No -19 0.64 No 51 49.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 7621851 + NM_001166114 PNPLA6 1 0.1 0.13 9 9.71 83.91 16 5.62 Yes 3 1.73 Yes 0 0 No -24 0.75 Yes 46 84.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7623702 + NM_001166114 PNPLA6 1 0.63 0.51 25 -5.64 67.56 26 8.69 Yes 13 0.46 No 18 0.81 Yes -25 0.57 No 46 54.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 7623891 + NM_001166114 PNPLA6 1 0.16 0.11 8 -7.41 0 11 4 No 70 -4.89 No 0 0 No -18 0.73 Yes 52 62.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 7625548 + NM_001166114 PNPLA6 1 0.38 0.44 22 -0.66 68.55 20 4.9 No 14 -0.99 No 0 0 No -38 0.52 No 32 64.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 108126207 - NM_001256011 PNPLA8 1 1.45 0.76 34 5.53 79.77 21 4.32 No 8 1.15 Yes 0 0 No -37 0.8 Yes 50 68.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 108135194 - NM_001256011 PNPLA8 1 0.26 0.14 8 6.05 80.59 25 4.37 No 5 1.05 Yes 0 0 No -28 0.43 No 43 55.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 108138055 - NM_001256011 PNPLA8 1 0.29 0.21 12 9.85 95.67 22 4.52 No 70 0.52 No 25 0.74 Yes -30 0.73 Yes 40 62.43 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 108138440 - NM_001256011 PNPLA8 1 0.43 0.28 16 10.98 87.79 24 7.11 Yes 32 0.59 No 0 0 No -23 0.76 Yes 26 47.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 46020708 + NM_018129 PNPO 1 0.58 0.46 23 5.02 78.62 17 4.26 No 4 1.99 Yes 21 0.88 Yes -21 0.92 Yes 49 90.85 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 46023210 + NM_018129 PNPO 1 0.12 0.26 16 3.36 78.77 16 5.77 Yes 3 0.62 No 0 0 No -20 0.58 No 50 83.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 46024004 + NM_018129 PNPO 1 0.07 0.14 8 8.52 89.03 30 5.83 Yes 35 1.33 Yes 0 0 No -29 0.89 Yes 41 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55867839 - NM_033109 PNPT1 1 0.09 0.1 7 -3.41 83.39 31 4.94 No 18 1.05 Yes 0 0 No -30 0.66 No 40 75.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 55870346 - NM_033109 PNPT1 1 0.62 1.35 50 3.56 80.01 46 8.87 Yes 33 1.26 Yes 0 0 No -25 0.85 Yes 45 62.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 55871855 - NM_033109 PNPT1 1 0.05 0.11 7 -12.21 0 36 6.65 Yes 57 0.67 No 0 0 No -27 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 55873625 - NM_033109 PNPT1 1 0.09 0.22 13 -1.72 0 47 7.8 Yes 34 1.46 Yes 22 0.74 Yes -24 0.43 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 55881636 - NM_033109 PNPT1 1 0.49 0.61 29 8.49 82.23 30 5.33 No 17 1.33 Yes 0 0 No -29 0.77 Yes 41 91.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55882107 - NM_033109 PNPT1 1 0.06 0.11 7 -1.44 66.96 18 4.9 No 29 1.39 Yes 25 0.65 Yes -41 0.43 No 59 37.95 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 55884437 - NM_033109 PNPT1 1 0.44 0.71 36 7.39 91.64 24 4.96 No 57 -1.9 No 0 0 No -23 0.61 No 47 61.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 55886403 - NM_033109 PNPT1 1 0.08 0.15 10 4.71 83.64 33 5.71 Yes 56 1.17 Yes 0 0 No -32 0.59 No 38 89.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 55895092 - NM_033109 PNPT1 1 0.07 0.18 12 -12.81 0 37 5.57 Yes 32 0.03 No 0 0 No -36 0.43 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 55895093 - NM_033109 PNPT1 1 0.07 0.14 7 -12.15 0 36 5.51 No 31 0.04 No 0 0 No -35 0.43 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 55898368 - NM_033109 PNPT1 1 0.29 0.58 27 3.53 75.81 24 6.29 Yes 11 2.03 Yes 0 0 No -23 0.82 Yes 47 79.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55913576 - NM_033109 PNPT1 1 4.85 7.4 70 1.69 0 30 5.74 Yes 17 0.57 No 0 0 No -29 0.91 Yes 41 96.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 89792264 + NM_006813 PNRC1 1 0.2 0.29 16 9.39 75.23 37 6.2 Yes 75 0.85 Yes 0 0 No -36 0.43 No 34 64.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 89792269 + NM_006813 PNRC1 1 0.35 0.44 27 4.79 0 42 6.56 Yes 29 0.8 Yes 0 0 No -41 0.47 No 29 72.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 24287422 + NM_017761 PNRC2 1 0.29 0.69 32 4.23 0 29 3.87 No 8 0.95 Yes 24 0.76 Yes -28 0.47 No 42 63.82 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 52146957 - NM_001161581 POC1A 1 2.28 0.76 37 5.01 81 25 5.04 No 55 -1.98 No 0 0 No -24 0.7 Yes 46 80.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52157616 - NM_001161581 POC1A 1 1.34 0.68 33 5.56 82.04 17 6.32 Yes 4 1.87 Yes 0 0 No -34 0.54 No 54 55.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52181076 - NM_001161581 POC1A 1 0.21 0.17 8 4.95 75.83 39 5.07 No 46 0.97 Yes 0 0 No -25 0.35 No 45 33.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52183371 - NM_001161581 POC1A 1 0.5 0.36 19 5.12 73.36 28 5.81 Yes 70 0.47 No 0 0 No -27 0.69 Yes 43 68.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52184000 - NM_001161581 POC1A 1 1.82 0.96 43 1.19 0 20 4.03 No 7 0.63 No 0 0 No -27 0.73 Yes 43 75.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 89819072 - NR_037659 POC1B 1 0.55 0.11 8 5.64 78.47 46 6.45 Yes 10 0.55 No 0 0 No -22 0.54 No 48 59.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 89827769 - NR_037659 POC1B 1 0.83 0.18 10 11.45 98.32 15 5.08 No 31 0.36 No 0 0 No -23 0.32 No 45 49.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 89864212 - NR_037659 POC1B 1 0.4 0.19 12 3.68 84.13 43 7.13 Yes 3 1.14 Yes 22 0.64 Yes -42 0.46 No 28 60.24 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 74981226 - NM_152408 POC5 1 6.23 2.35 56 5.87 84.08 37 5.81 Yes 3 0.52 No 24 0.17 Yes -24 0.49 No 46 58.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 74983154 - NM_152408 POC5 1 10.49 3.92 66 6.57 88.18 20 7.6 Yes 66 1.45 Yes 0 0 No -23 0.67 Yes 47 74.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 74985505 - NM_152408 POC5 1 1.29 0.58 27 4.5 83.88 21 5.46 No -1 0.4 No 0 0 No -20 0.21 No 47 39.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 74998972 - NM_152408 POC5 1 0.19 0.13 7 8.13 94.94 25 6.14 Yes 12 1.24 Yes 0 0 No -24 0.86 Yes 46 91.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30804810 + NM_015352 POFUT1 1 0.26 0.22 15 10.5 87.25 16 4.28 No 3 0.67 No 24 0.79 Yes -21 0.67 Yes 49 47.16 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 30810435 + NM_015352 POFUT1 1 2.85 2.53 68 5.68 88.32 23 4.79 No 10 0.59 No 0 0 No -22 0.83 Yes 48 92.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30818559 + NM_015352 POFUT1 1 0.24 0.21 12 9.05 90.95 10 5.47 No 70 0.45 No 0 0 No -24 0.63 No 46 73.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 30818624 + NM_015352 POFUT1 1 0.32 0.28 14 1.05 69.28 27 6.39 Yes 14 1.35 Yes 0 0 No -26 0.61 No 44 70.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 46685551 - NM_015227 POFUT2 1 0.6 0.1 7 11.58 89.09 45 5.4 No 32 1.6 Yes 28 0.91 Yes -28 0.86 Yes 42 91.22 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 46697689 - NM_015227 POFUT2 1 2.18 0.42 19 10.37 79.63 18 5.7 Yes 36 0.38 No 26 0.54 Yes -24 0.52 No 46 65.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 46698300 - NM_015227 POFUT2 1 0.48 0.17 10 5.43 81.66 23 6.33 Yes 10 1.61 Yes 0 0 No -22 0.81 Yes 48 78.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 46702314 - NM_015227 POFUT2 1 4.26 0.86 35 10.06 88.57 25 6.32 Yes 12 1.45 Yes 24 0.95 Yes -24 0.89 Yes 46 88.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 46702854 - NM_015227 POFUT2 1 1.25 0.26 14 5.78 78.65 54 7.75 Yes 41 1.14 Yes 22 0.82 Yes -22 0.75 Yes 48 62.85 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr21 46702962 - NM_015227 POFUT2 1 1.87 0.36 20 9.01 88.8 24 6.86 Yes 56 -1.21 No 0 0 No -26 0.75 Yes 47 67.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 46705145 - NM_015227 POFUT2 1 0.84 0.21 14 6.82 87.59 26 5.36 No -2 0.76 No 0 0 No -25 0.75 Yes 45 71.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 46705244 - NM_015227 POFUT2 1 2.67 0.68 35 5.74 93.34 21 5 No 30 0.77 No 0 0 No -20 0.64 No 50 69.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 166820571 + NM_017542 POGK 1 0.24 0.24 15 10.13 91.49 28 5.66 Yes 15 0.74 No 0 0 No -25 0.64 No 45 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 166821803 + NM_017542 POGK 1 0.17 0.17 12 2.67 78.44 12 4.34 No -2 0.7 No 24 0.92 Yes -58 0.27 No 53 28.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 119191270 + NM_152305 POGLUT1 1 0.77 0.5 21 3.63 78.81 18 5.48 No 5 0.33 No 0 0 No -25 0.49 No 45 48.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 119197180 + NM_152305 POGLUT1 1 2.69 1.69 58 7.68 81.56 14 3.56 No 45 0.79 Yes 23 0.89 Yes -23 0.93 Yes 47 90.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 119198349 + NM_152305 POGLUT1 1 0.8 0.54 25 7.32 83.08 25 6.56 Yes 12 0.72 No 0 0 No -24 0.75 Yes 46 72.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119198754 + NM_152305 POGLUT1 1 3.56 2.35 62 7.75 91.79 35 4.4 No 29 1.1 Yes 24 0.83 Yes -24 0.74 Yes 46 87.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 119198862 + NM_152305 POGLUT1 1 0.26 0.15 8 4.72 75.45 31 5.66 Yes 18 0.3 No 31 0.84 Yes -25 0.87 Yes 45 91.88 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr3 119207572 + NM_152305 POGLUT1 1 0.57 0.43 24 7.22 82.42 21 6.5 Yes 8 0.5 No 0 0 No -20 0.67 Yes 50 58.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 119210609 + NM_152305 POGLUT1 1 8.96 8.03 72 7.25 85.1 54 6.79 Yes 72 -5.21 No 0 0 No -29 0.37 No 41 58.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151381302 - NM_001194938 POGZ 1 0.14 0.14 10 -0.45 68.24 41 6.55 Yes 71 1.17 Yes 0 0 No -41 0.6 No 29 72.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 151400518 - NM_001194938 POGZ 1 1807.67 118.17 72 4.27 72.05 22 5.68 Yes 66 -3.45 No 21 0.33 Yes -18 0.43 No 52 63.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 151413563 - NM_001194938 POGZ 1 699.83 110.83 72 11 80.2 24 5.83 Yes 11 0.83 Yes 23 0.88 Yes -23 0.68 Yes 47 79.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 151427580 - NM_001194938 POGZ 1 1.01 0.35 20 4.31 84.41 31 6.85 Yes 69 0.63 No 0 0 No -30 0.92 Yes 40 97.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 24722213 + NM_001330360 POLA1 1 0.12 0.13 8 6.54 83.02 35 7.68 Yes 22 1.58 Yes 0 0 No -34 0.55 No 36 80.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 24722484 + NM_001330360 POLA1 1 0.11 0.1 7 0.21 73.2 17 3.9 No 17 -2.62 No 28 0.83 Yes -36 0.2 No 34 60.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 24730247 + NM_001330360 POLA1 1 0.1 0.13 9 4.56 87.6 21 5.03 No 2 1.26 Yes 0 0 No -20 0.53 No 13 78.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 24744070 + NM_001330360 POLA1 1 0.2 0.15 7 5.28 87.8 17 4.69 No 75 0.58 No 30 0.82 Yes -24 0.3 No 46 54.46 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 24761221 + NM_001330360 POLA1 1 0.31 0.19 12 12.08 87.82 18 8.53 Yes 5 1.55 Yes 0 0 No -21 0.61 No 49 60.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 24778368 + NM_001330360 POLA1 1 0.26 0.13 8 8.19 77.86 31 5.84 Yes 41 0.93 Yes 0 0 No -30 0.63 No 40 67.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 24793313 + NM_001330360 POLA1 1 0.48 0.24 17 8.3 75.52 48 7.6 Yes 35 0.62 No 20 0.39 Yes -30 0.59 No 40 72.44 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chrX 24799297 + NM_001330360 POLA1 1 0.24 0.13 8 10.67 92.69 35 7.35 Yes 22 1.54 Yes 0 0 No -25 0.64 No 45 59.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 24838390 + NM_001330360 POLA1 1 0.09 0.11 7 4.58 82.01 36 5.06 No 43 1.28 Yes 0 0 No -22 0.59 No 48 70.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 24863984 + NM_001330360 POLA1 1 0.82 0.74 33 4.89 80.46 34 5.27 No 7 0.21 No 0 0 No -19 0.8 Yes 51 82.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 24873443 + NM_001330360 POLA1 1 0.42 0.39 19 4.87 81.3 15 4.97 No 23 0.04 No 0 0 No -24 0.84 Yes 46 75.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 24952197 + NM_001330360 POLA1 1 1.25 0.86 35 4.57 82.93 16 4.87 No 44 -2.67 No 0 0 No -20 0.46 No 50 49.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 24965572 + NM_001330360 POLA1 1 1.05 0.65 31 9.29 87.64 23 7.35 Yes 72 1.47 Yes 0 0 No -22 0.93 Yes 48 95.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 25005744 + NM_001330360 POLA1 1 0.69 0.44 20 7.65 85.57 31 7.08 Yes 5 0.79 Yes 0 0 No -30 0.48 No 39 73.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 65036133 + NM_002689 POLA2 1 0.19 0.33 19 7.98 89.3 19 5.61 Yes 70 0.92 Yes 27 0.24 Yes -25 0.69 Yes 45 71.22 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65039951 + NM_002689 POLA2 1 0.37 0.58 27 5.29 72.69 46 5.68 Yes 33 0.27 No 0 0 No -35 0.47 No 35 71.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 65046372 + NM_002689 POLA2 1 0.08 0.13 7 3.4 77.51 28 5.29 No 15 1.14 Yes 0 0 No -27 0.93 Yes 43 94.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65047202 + NM_002689 POLA2 1 0.36 0.51 26 9.58 76.23 52 7.19 Yes 39 1.53 Yes 0 0 No -20 0.74 Yes 50 71.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65056521 + NM_002689 POLA2 1 0.12 0.15 8 -10.08 0 39 6.81 Yes 26 1.23 Yes 0 0 No -38 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 65062479 + NM_002689 POLA2 1 0.11 0.17 10 -1.06 81.82 86 10.15 Yes 73 1.05 Yes 0 0 No -25 0.36 No 45 31.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65063404 + NM_002689 POLA2 1 1.82 3.1 64 6 78.13 30 5.47 No 17 0.82 Yes 29 0.76 Yes -29 0.85 Yes 41 79.73 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 65065142 + NM_002689 POLA2 1 2.03 2.43 61 7.72 87.64 43 7.15 Yes 30 2.04 Yes 0 0 No -42 0.59 No 28 61.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 42207505 + NM_002690 POLB 1 0.26 0.26 18 1.94 66.03 13 5.04 No 0 1 Yes 27 0.63 Yes -24 0.82 Yes 46 80.27 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 42211934 + NM_002690 POLB 1 13.56 11.61 72 5.81 79.92 23 5.46 No 10 0.63 No 22 0.89 Yes -22 0.9 Yes 48 89.41 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 42218613 + NM_002690 POLB 1 0.99 1.22 50 6.06 85.6 81 6.17 Yes 13 1.22 Yes 25 0.84 Yes -25 0.86 Yes 45 88.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50902512 + NM_001308632 POLD1 1 0.57 0.65 32 6.71 75.24 27 6.58 Yes 14 2.62 Yes 0 0 No -26 0.86 Yes 44 81.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50902557 + NM_001308632 POLD1 1 0.34 0.44 22 9.64 86.45 35 6.08 Yes 59 2.6 Yes 0 0 No -34 0.5 No 36 72.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 50902632 + NM_001308632 POLD1 1 0.17 0.22 11 4.05 0 43 7.55 Yes 30 1.2 Yes 0 0 No -28 0.47 No 33 77.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 50904708 + NM_001308632 POLD1 1 0.17 0.18 11 4.79 90.21 27 5.74 Yes 14 -0.11 No 0 0 No -26 0.72 Yes 9 35.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 50905172 + NM_001308632 POLD1 1 0.22 0.26 15 5.04 82.45 65 7.58 Yes 52 0.39 No 0 0 No -34 0.59 No 36 70.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 50905445 + NM_001308632 POLD1 1 0.12 0.14 9 0.37 76.35 16 5.2 No 49 0.42 No 18 0.34 Yes -20 0.58 No 50 45.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 50905559 + NM_001308632 POLD1 1 0.1 0.1 7 8.2 80.15 52 8.03 Yes 39 -1.17 No 0 0 No -51 0.61 No 19 53.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50906347 + NM_001308632 POLD1 1 4.13 3.58 65 3.44 79.29 27 3.66 No 8 0.92 Yes 0 0 No -20 0.73 Yes 50 74.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50912402 + NM_001308632 POLD1 1 0.99 1.06 41 -4.49 0 17 4.12 No 34 0.65 No 0 0 No -20 0.45 No 50 37.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50913197 + NM_001308632 POLD1 1 0.46 0.42 25 11.32 86.54 28 5.66 Yes 55 1.42 Yes 0 0 No -25 0.69 Yes 45 67.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 50913237 + NM_001308632 POLD1 1 0.28 0.25 15 6.94 65.88 25 5.39 No 12 0.07 No 0 0 No -24 0.92 Yes 46 92.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 50914239 + NM_001308632 POLD1 1 0.15 0.14 8 3.01 0 32 6.75 Yes 60 -2.89 No 0 0 No -34 0.44 No 36 74.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 50918463 + NM_001308632 POLD1 1 0.12 0.11 7 3.35 75.53 26 5.66 Yes 35 -0.94 No 0 0 No -25 0.63 No 45 68.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44154570 - NM_006230 POLD2 1 0.33 0.85 35 2.2 76.37 27 4.84 No 70 0.63 No 29 0.6 Yes -26 0.64 No 55 56.03 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 44154954 - NM_006230 POLD2 1 1.49 4.4 68 7.55 86.95 19 7.14 Yes 6 2.12 Yes 18 0.86 Yes -25 0.57 No 45 59.29 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44155806 - NM_006230 POLD2 1 0.78 2.69 65 5.23 78.98 30 5.48 No 5 0.63 No 0 0 No -24 0.52 No 46 67.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44155809 - NM_006230 POLD2 1 1.32 4.43 71 4.16 73.6 27 5.28 No 2 0.61 No 26 0.81 Yes -26 0.61 No 49 59.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 44157369 - NM_006230 POLD2 1 0.12 0.38 14 2.51 68.64 33 5.66 Yes 20 0.85 Yes 22 0.49 Yes -32 0.91 Yes 38 96.4 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44158476 - NM_006230 POLD2 1 0.22 0.5 26 -0.82 69.38 20 4.69 No 59 0.03 No 0 0 No -19 0.52 No 47 41.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44161795 - NM_006230 POLD2 1 1.12 1.07 44 8.91 86.91 30 4.15 No 71 -3.24 No 22 0.79 Yes -23 0.78 Yes 47 90.74 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44161882 - NM_006230 POLD2 1 12.33 12.15 72 2.1 77.46 36 6.48 Yes -2 0.4 No 35 0.35 Yes -35 0.76 Yes 35 86.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44162059 - NM_006230 POLD2 1 0.19 0.21 14 -1.68 0 34 5.42 No 53 0.43 No 30 0.41 Yes -49 0.57 No 37 38.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 74304082 + NR_046409 POLD3 1 0.74 0.5 25 9.27 84.17 27 5.74 Yes 14 0.93 Yes 0 0 No -26 0.84 Yes 44 84.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 74304194 + NR_046409 POLD3 1 0.28 0.17 10 2.72 60.63 38 6.16 Yes 25 1.17 Yes 0 0 No -37 0.76 Yes 33 83.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 74323925 + NR_046409 POLD3 1 0.75 0.74 35 1.57 76.59 28 6.47 Yes 15 1.87 Yes 0 0 No -31 0.76 Yes 39 77.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 74333591 + NR_046409 POLD3 1 0.23 0.24 13 5.39 78.31 32 4 No 1 0.75 No 0 0 No -31 0.75 Yes 39 92.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 74338742 + NR_046409 POLD3 1 0.24 0.24 15 12 87.44 23 6 Yes 32 0.74 No 0 0 No -22 0.84 Yes 48 84.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 74345636 + NR_046409 POLD3 1 0.13 0.18 11 1.8 0 17 4.12 No 22 1.36 Yes 0 0 No -29 0.74 Yes 41 82.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67119298 - NR_046413 POLD4 1 0.07 0.24 12 4.52 79.43 23 5.86 Yes -4 1.04 Yes 0 0 No -22 0.83 Yes 48 81.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67120330 - NR_046413 POLD4 1 0.06 0.13 7 4.31 77.04 42 6.48 Yes 29 1.67 Yes 0 0 No -41 0.54 No 35 55.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 26676627 - NM_001290145 POLDIP2 1 0.26 0.86 40 3.73 81.49 29 5.39 No 16 -1.68 No 0 0 No -28 0.56 No 42 45.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 26676651 - NM_001290145 POLDIP2 1 0.09 0.29 17 -3.05 83.04 25 5.1 No 37 -0.63 No 0 0 No -24 0.65 No 46 78.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 26676653 - NM_001290145 POLDIP2 1 0.14 0.43 23 4.47 84.65 23 4.9 No 35 -0.63 No 0 0 No -22 0.65 No 48 81.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 26677653 - NM_001290145 POLDIP2 1 0.13 0.56 26 6.79 88.52 18 5.83 Yes 5 1.36 Yes 0 0 No -27 0.91 Yes 43 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26677815 - NM_001290145 POLDIP2 1 0.06 0.22 14 -0.68 0 28 7.33 Yes 16 0.17 No 0 0 No -28 0.86 Yes 42 93.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 26677941 - NM_001290145 POLDIP2 1 0.2 0.76 33 10.65 84.53 16 5.05 No 3 0.65 No 0 0 No -22 0.91 Yes 48 90.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 26680383 - NM_001290145 POLDIP2 1 0.05 0.19 13 6.28 83.34 18 5.48 No 5 1.26 Yes 25 0.95 Yes -23 0.36 No 48 66.94 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 26680816 - NM_001290145 POLDIP2 1 0.02 0.11 8 -5.02 66.39 31 7.67 Yes 18 1.08 Yes 0 0 No -30 0.87 Yes 40 89.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26681612 - NM_001290145 POLDIP2 1 5579.24 390.51 72 8.75 90.31 25 4.94 No 12 1.36 Yes 24 0.97 Yes -24 0.94 Yes 46 95.82 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 42983086 - NM_178136 POLDIP3 1 0.21 0.26 17 10.33 91.77 47 7.28 Yes 34 0.89 Yes 0 0 No -46 0.62 No 24 83.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 42983574 - NM_178136 POLDIP3 1 0.22 0.31 16 2.5 0 40 6.24 Yes 27 0.71 No 0 0 No -39 0.87 Yes 31 92.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 42987520 - NM_178136 POLDIP3 1 0.14 0.18 11 9.55 93.95 29 5.46 No 16 0.92 Yes 0 0 No -28 0.89 Yes 42 89.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42991610 - NM_178136 POLDIP3 1 0.13 0.28 15 1.24 0 20 4.19 No 20 1.56 Yes 21 0.77 Yes -32 0.62 No 38 81.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 42993744 - NM_178136 POLDIP3 1 0.95 1.81 63 4.84 83.22 25 5.1 No 12 0.8 Yes 24 0.67 Yes -19 0.42 No 42 41.55 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 42998063 - NM_178136 POLDIP3 1 1241.63 164.69 72 2.4 0 19 4.21 No 54 1.93 Yes 18 0.91 Yes -18 0.86 Yes 52 91.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 42998114 - NM_178136 POLDIP3 1 3.32 0.46 24 4.68 77.64 16 5.1 No 3 1.98 Yes 25 0.63 Yes -25 0.55 No 45 45.49 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 43004969 - NM_178136 POLDIP3 1 0.14 0.1 7 8.79 95.17 22 5 No 47 1.71 Yes 0 0 No -21 0.42 No 52 64.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 43008665 - NM_178136 POLDIP3 1 0.23 0.15 10 2.24 80.12 20 7.13 Yes 7 1.19 Yes 0 0 No -19 0.53 No 51 48.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133200587 - NM_006231 POLE 1 0.12 0.13 8 9.48 85.21 32 5.74 Yes 19 1.23 Yes 0 0 No -31 0.86 Yes 39 91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133201699 - NM_006231 POLE 1 0.22 0.15 7 0.26 72.83 23 3.91 No 17 -2.32 No 0 0 No -25 0.58 No 45 78.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 133208594 - NM_006231 POLE 1 0.26 0.18 9 7.95 79.35 46 4.39 No 37 0.44 No 0 0 No -29 0.37 No 42 72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 133209027 - NM_006231 POLE 1 0.2 0.13 8 3.27 76.02 28 5.25 No 75 1.05 Yes 26 0.9 Yes -27 0.92 Yes 43 92.28 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133209075 - NM_006231 POLE 1 2.77 1.67 56 5.57 88.94 16 5.2 No 27 1.06 Yes 22 0.48 Yes -24 0.64 No 40 50.55 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 133217946 - NM_006231 POLE 1 0.69 0.36 21 3.26 66.2 30 5.74 Yes 58 2.17 Yes 0 0 No -29 0.94 Yes 41 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133217970 - NM_006231 POLE 1 0.25 0.13 7 4.89 88.91 22 4.69 No 34 2.17 Yes 26 0.91 Yes -21 0.96 Yes 49 95.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 133218868 - NM_006231 POLE 1 0.12 0.1 7 7.83 84.3 28 5.88 Yes NA NA NA 0 0 No -28 0.73 Yes 42 59.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 133218902 - NM_006231 POLE 1 0.84 0.63 32 7.27 78.12 27 7.48 Yes 62 0.54 No 0 0 No -37 0.55 No 44 57.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133220087 - NM_006231 POLE 1 0.28 0.15 10 4.91 66.98 53 8.31 Yes 40 -1.24 No 0 0 No -32 0.8 Yes 38 82.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133220613 - NM_006231 POLE 1 0.24 0.15 10 8.03 79.53 31 5.83 Yes NA NA NA 0 0 No -27 0.82 Yes 43 80.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133224744 - NM_006231 POLE 1 0.36 0.17 10 10.12 88.52 42 6.56 Yes 45 -1.11 No 0 0 No -39 0.72 Yes 31 77.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133225400 - NM_006231 POLE 1 0.54 0.32 17 5.76 68.32 16 5.04 No 42 0.62 No 0 0 No -23 0.62 No 47 77.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 133234528 - NM_006231 POLE 1 0.16 0.13 7 6.65 83.88 36 6.16 Yes 44 1.31 Yes 0 0 No -35 0.6 No 35 88.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 133236030 - NM_006231 POLE 1 0.3 0.14 9 5.95 67.99 31 5.19 No 38 0.93 Yes 0 0 No -23 0.83 Yes 47 68.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 133236092 - NM_006231 POLE 1 0.34 0.18 12 3.64 0 24 6.13 Yes 42 0.64 No 0 0 No -31 0.68 Yes 39 75.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133238267 - NM_006231 POLE 1 0.86 0.82 37 -1.57 0 36 5.57 Yes 7 0.87 Yes 0 0 No -29 0.62 No 35 61.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133241002 - NM_006231 POLE 1 1.22 0.94 40 6.9 89.15 32 5.83 Yes 37 -1.52 No 0 0 No -31 0.59 No 54 67.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133243587 - NM_006231 POLE 1 0.23 0.15 11 6.08 79.96 34 6.92 Yes 74 1.69 Yes 0 0 No -28 0.64 No 43 78.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 133245302 - NM_006231 POLE 1 0.2 0.19 10 -1.38 55.02 25 5.57 Yes 21 1.81 Yes 0 0 No -44 0.89 Yes 26 82.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133246043 - NM_006231 POLE 1 0.56 0.58 28 10.62 90.83 37 6.35 Yes 24 0.05 No 0 0 No -36 0.78 Yes 34 71.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 133246935 - NM_006231 POLE 1 0.13 0.14 8 5.41 90.92 28 5.14 No 3 0.8 Yes 0 0 No -27 0.82 Yes 43 82.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133248879 - NM_006231 POLE 1 0.21 0.13 7 8.33 85.06 15 6.24 Yes 44 2.33 Yes 0 0 No -56 0.35 No 46 40.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133252771 - NM_006231 POLE 1 1.47 1.4 41 5.24 82.87 17 3.86 No 22 0.56 No 22 0.58 Yes -51 0.33 No 19 35.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 133253546 - NM_006231 POLE 1 0.55 0.61 30 6.84 82.68 24 5.35 No 32 0.33 No 0 0 No -23 0.41 No 50 33.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133254296 - NM_006231 POLE 1 2.41 1.75 55 1.77 0 19 4.36 No 68 0.59 No 0 0 No -18 0.76 Yes 36 61.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 133259374 - NM_006231 POLE 1 0.36 0.11 7 5.4 81.43 18 7 Yes 72 1.26 Yes 0 0 No -17 0.53 No 53 78.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 50120904 - NM_001197331 POLE2 1 0.25 0.11 8 4.35 78.46 34 5.92 Yes 53 0.78 Yes 0 0 No -31 0.9 Yes 39 94.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50120930 - NM_001197331 POLE2 1 1.55 0.85 34 -3.11 75.5 40 7.44 Yes 61 1.12 Yes 0 0 No -30 0.38 No 40 34.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50120930 - NM_001197331 POLE2 1 0.55 0.22 11 -3.11 75.5 40 7.44 Yes 61 1.12 Yes 0 0 No -30 0.38 No 40 34.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50122426 - NM_001197331 POLE2 1 1.07 0.26 12 5.35 80.79 45 7.07 Yes 5 0.09 No 0 0 No -36 0.68 Yes 34 81.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50122530 - NM_001197331 POLE2 1 1.69 0.47 23 -4.02 86.92 13 6.34 Yes 0 0.61 No 0 0 No -24 0.67 Yes 46 71.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50128986 - NM_001197331 POLE2 1 0.71 0.17 10 5.89 71.73 29 3.88 No 16 -3.22 No 0 0 No -28 0.69 Yes 48 47.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 50136315 - NM_001197331 POLE2 1 0.51 0.32 18 -4.31 87.56 26 5.68 Yes 8 0.5 No 0 0 No -25 0.92 Yes 45 95.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50136346 - NM_001197331 POLE2 1 0.52 0.33 17 9.82 85.25 31 5.74 Yes 15 0.46 No 23 0.78 Yes -30 0.69 Yes 40 75.63 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 116171257 - NM_001278255 POLE3 1 0.08 0.19 13 -1.86 0 12 4 No 17 2.3 Yes 0 0 No -29 0.65 No 41 57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 75186832 + NM_019896 POLE4 1 0.71 1.22 33 4.77 81.79 28 5.29 No 37 0.57 No 25 0.51 Yes -30 0.25 No 53 36.78 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 75196544 + NM_019896 POLE4 1 0.21 0.42 26 -1.16 0 12 4.24 No 47 1.63 Yes 0 0 No -29 0.82 Yes 41 89.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89860708 - NM_001126131 POLG 1 0.95 1.04 40 4.58 83.69 16 4.69 No 3 0.31 No 0 0 No -19 0.63 No 51 72.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 89860784 - NM_001126131 POLG 1 0.15 0.15 9 -7.94 0 28 5.38 No 27 0.94 Yes 23 0.89 Yes -27 0.43 No 53 26.32 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 89861207 - NM_001126131 POLG 1 0.19 0.19 12 4.97 75.76 34 6.61 Yes 1 0.96 Yes 0 0 No -33 0.46 No 37 49.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 89861269 - NM_001126131 POLG 1 8.49 8.32 72 5.86 83.42 19 5 No 47 0.3 No 22 0.71 Yes -22 0.5 No 46 55.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 89861948 - NM_001126131 POLG 1 0.31 0.35 22 0.95 71.94 28 5.47 No 46 1.28 Yes 0 0 No -27 0.6 No 43 71.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 89862494 - NM_001126131 POLG 1 0.25 0.28 16 8.32 90.02 24 5.48 No 59 -4.05 No 0 0 No -23 0.92 Yes 47 87.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 89862640 - NM_001126131 POLG 1 0.87 0.86 35 3.19 78.7 24 5.56 No 38 0.34 No 0 0 No -23 0.68 Yes 47 80.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 89866180 - NM_001126131 POLG 1 0.26 0.28 15 7.48 84.56 20 5.83 Yes 7 1.45 Yes 0 0 No -19 0.91 Yes 51 97.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89866784 - NM_001126131 POLG 1 0.96 1.53 50 5.67 83.59 46 7.2 Yes 73 0.85 Yes 23 0.95 Yes -45 0.71 Yes 25 67.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 89867419 - NM_001126131 POLG 1 0.56 0.61 33 2.75 80.83 23 4.9 No 63 0.71 No 21 0.63 Yes -21 0.53 No 47 29.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 89870311 - NM_001126131 POLG 1 1.13 1.18 42 -1.13 0 20 3.75 No 7 0.28 No 29 0.54 Yes -19 0.84 Yes 51 76.17 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 89870328 - NM_001126131 POLG 1 0.13 0.15 9 -0.58 0 15 4.58 No 67 -3.52 No 29 0.54 Yes -14 0.1 No 56 24.87 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 89870602 - NM_001126131 POLG 1 0.1 0.11 8 5.88 77.69 31 6.07 Yes 39 0.11 No 28 0.75 Yes -23 0.56 No 41 72.08 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr15 89871743 - NM_001126131 POLG 1 0.12 0.17 9 1.48 0 19 4.58 No 57 1.05 Yes 0 0 No -18 0.87 Yes 52 76.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 89875571 - NM_001126131 POLG 1 0.43 0.25 14 5.11 89.89 31 6.17 Yes 65 1.07 Yes 0 0 No -23 0.58 No 47 74.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 89875606 - NM_001126131 POLG 1 5.03 2.86 62 10.41 94.81 43 6.63 Yes 30 1.1 Yes 34 0.41 Yes -37 0.5 No 33 71.1 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 62474077 - NM_007215 POLG2 1 0.88 0.24 14 5.71 87.95 22 3.9 No 46 1.39 Yes 0 0 No -24 0.55 No 46 55.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 62474077 - NM_007215 POLG2 1 0.46 0.11 8 5.71 87.95 22 3.9 No 46 1.39 Yes 0 0 No -24 0.55 No 46 55.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 62477564 - NM_007215 POLG2 1 2.79 0.74 39 7.68 90.88 38 6.26 Yes 52 1.08 Yes 21 0.46 Yes -38 0.34 No 32 41.44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 62478352 - NM_007215 POLG2 1 2.14 0.46 22 4.09 77.35 24 6 Yes 36 -2.58 No 0 0 No -23 0.67 Yes 47 70.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 62479092 - NM_007215 POLG2 1 2.31 0.75 32 4.95 74.08 19 4.11 No 0 0.81 Yes 27 0.83 Yes -19 0.6 No 51 85.72 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 62479624 - NM_007215 POLG2 1 0.78 0.24 16 4.62 0 28 6.18 Yes 15 0.68 No 0 0 No -27 0.77 Yes 43 84.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 62483186 - NM_007215 POLG2 1 0.89 0.25 15 5.74 76.6 46 7.25 Yes 62 -2.06 No 44 0.05 Yes -45 0.54 No 24 63.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 62486795 - NM_007215 POLG2 1 14.3 4.06 69 9.97 88.21 24 7.08 Yes 11 1.25 Yes 24 0.89 Yes -24 0.56 No 47 74.73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr6 43544761 + NM_006502 POLH 1 0.77 1.13 46 7.09 77.78 31 8.38 Yes 47 0.67 No 0 0 No -30 0.53 No 40 47.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43545481 + NM_006502 POLH 1 0.13 0.26 14 9.48 83.17 71 7.17 Yes 45 1.37 Yes 0 0 No -38 0.56 No 32 54.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43551312 + NM_006502 POLH 1 0.17 0.4 21 6.4 84.67 24 4.97 No 65 -3.74 No 0 0 No -23 0.66 Yes 47 67.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 43552257 + NM_006502 POLH 1 3.03 6.79 72 2.7 67.68 35 7.14 Yes -2 0.58 No 0 0 No -34 0.87 Yes 36 84.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43555023 + NM_006502 POLH 1 0.08 0.14 8 -9.52 0 18 4.9 No 20 0.9 Yes 0 0 No -39 0.64 No 31 41.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43557391 + NM_006502 POLH 1 0.1 0.15 10 4.31 84.41 35 5.88 Yes 22 1.47 Yes 0 0 No -34 0.61 No 36 74.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 43565479 + NM_006502 POLH 1 0.05 0.1 7 7.42 88.33 26 6.1 Yes 60 0.72 No 0 0 No -25 0.9 Yes 45 91.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43579497 + NM_006502 POLH 1 2.15 3.75 70 -5.3 0 17 4.12 No 63 0.85 Yes 0 0 No -20 0.27 No 50 46.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43579510 + NM_006502 POLH 1 0.26 0.49 25 7.1 86.47 16 4.69 No 76 0.85 Yes 0 0 No -15 0.27 No 47 37.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43581467 + NM_006502 POLH 1 2.76 5.17 71 9.69 89.81 59 8.94 Yes 46 1.03 Yes 35 0.41 Yes -35 0.86 Yes 35 84.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 51798464 + NM_007195 POLI 1 3.12 0.58 26 8.51 89.47 26 5.39 No 68 0.62 No 0 0 No -25 0.37 No 44 31.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 51801208 + NM_007195 POLI 1 1.16 0.19 11 6.14 82.05 56 5.4 No 43 0.52 No 0 0 No -27 0.62 No 26 52.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 51809688 + NM_007195 POLI 1 1.39 0.19 11 5.98 86.14 25 5.66 Yes 4 0.12 No 0 0 No -24 0.65 No 46 88.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 51810112 + NM_007195 POLI 1 8.12 1.22 48 5.82 77.51 31 4.41 No 39 1.36 Yes 30 0.83 Yes -30 0.49 No 44 65.46 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr18 51810935 + NM_007195 POLI 1 1.43 0.31 17 5.01 80.41 33 6.67 Yes 67 1.25 Yes 28 0.24 Yes -32 0.47 No 38 44.52 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 74808603 + NM_001345922 POLK 1 0.37 0.11 7 4.28 72.46 22 5.65 Yes 65 0.86 Yes 0 0 No -28 0.39 No 49 37.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 74816238 + NM_001345922 POLK 1 0.78 0.13 8 9.51 95.2 20 4.06 No 30 0.62 No 0 0 No -23 0.7 Yes 47 60.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 74830652 + NM_001345922 POLK 1 10.79 2.78 65 10.26 85.95 46 6.8 Yes 69 0.75 No 32 0.39 Yes -37 0.51 No 33 56.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 74865771 + NM_001345922 POLK 1 0.27 0.29 17 10.52 79.76 32 6.61 Yes 19 1.39 Yes 0 0 No -31 0.73 Yes 39 89.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 74869523 + NM_001345922 POLK 1 0.22 0.28 18 8.67 77.72 42 11.23 Yes 29 1.11 Yes 21 0.32 Yes -30 0.51 No 40 83.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr5 74876380 + NM_001345922 POLK 1 4.15 6.11 72 2.26 74.71 37 5.89 Yes 24 1.58 Yes 0 0 No -42 0.68 Yes 34 54.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 74876954 + NM_001345922 POLK 1 0.07 0.11 8 10.16 94.05 27 5.39 No 14 0.92 Yes 0 0 No -26 0.72 Yes 44 87.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 74877042 + NM_001345922 POLK 1 0.09 0.13 8 -2.65 0 16 4.16 No 56 0.57 No 0 0 No -40 0.34 No 40 40.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 74886177 + NM_001345922 POLK 1 0.12 0.14 10 -2.79 0 12 4.24 No 71 -2.19 No 0 0 No -31 0.48 No 27 48.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 74889790 + NM_001345922 POLK 1 0.8 0.43 23 8.42 91.71 21 5.73 Yes 8 0.37 No 26 0.57 Yes -26 0.79 Yes 44 69.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 74888981 + NM_001345922 POLK 1 2.81 1.43 54 3.06 0 39 6.61 Yes 40 0.65 No 0 0 No -25 0.54 No 45 63.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 74889766 + NM_001345922 POLK 1 0.28 0.15 10 4.3 80.6 20 5.18 No 34 -3.51 No 26 0.57 Yes -24 0.62 No 46 60.14 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 74889790 + NM_001345922 POLK 1 7.04 3.88 68 8.42 91.71 21 5.73 Yes 8 0.37 No 26 0.57 Yes -26 0.79 Yes 44 69.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 74893575 + NM_001345922 POLK 1 0.22 0.24 14 1.25 0 23 9.04 Yes 10 1.16 Yes 0 0 No -38 0.9 Yes 32 93.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 103339563 - NR_033406 POLL 1 0.36 0.17 10 2.13 0 15 4.58 No 74 -2.92 No 0 0 No -35 0.59 No 35 78.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 103339593 - NR_033406 POLL 1 0.41 0.19 13 7.05 79.14 28 5.83 Yes 44 -2.93 No 23 0.8 Yes -32 0.5 No 38 33.13 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 103339596 - NR_033406 POLL 1 0.45 0.19 14 6.66 80.41 25 5.57 Yes 41 -2.94 No 24 0.57 Yes -29 0.53 No 41 38.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 44116229 - NM_001284330 POLM 1 53.42 2.5 59 9.37 83.29 26 6.26 Yes 43 -2.29 No 26 0.88 Yes -25 0.6 No 45 85.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr7 44118038 - NM_001284330 POLM 1 3.41 0.18 12 3.83 84.17 27 5.39 No 58 0.87 Yes 26 0.88 Yes -26 0.83 Yes 44 71.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44118442 - NM_001284330 POLM 1 2.84 1.21 48 10 83.35 36 6.22 Yes 29 2.88 Yes 27 0.92 Yes -35 0.73 Yes 35 87.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 44119270 - NM_001284330 POLM 1 0.34 0.1 7 8.64 85.07 26 5.6 Yes -1 0.72 No 0 0 No -25 0.6 No 45 60.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44119356 - NM_001284330 POLM 1 3.12 1.04 40 7.92 77.56 19 5.74 Yes 76 -3.49 No 26 0.71 Yes -21 0.8 Yes 44 38.14 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 44120071 - NM_001284330 POLM 1 0.35 0.15 9 8.24 94.45 40 8.12 Yes 27 1.29 Yes 35 0.22 Yes -39 0.74 Yes 31 63.79 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 2176040 - NM_181808 POLN 1 1.63 0.13 7 10.42 85.49 38 6.32 Yes 25 1.41 Yes 0 0 No -37 0.92 Yes 33 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2224808 - NM_181808 POLN 1 3.42 0.14 8 6.09 78.18 31 6.08 Yes 18 0.71 No 0 0 No -30 0.84 Yes 40 84.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121151261 - NM_199420 POLQ 1 3.35 1.15 45 2.49 0 27 6.48 Yes 14 1.22 Yes 0 0 No -26 0.91 Yes 44 89.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121151884 - NM_199420 POLQ 1 14.96 5.26 70 2.12 78.39 27 5.48 No 14 1.36 Yes 29 0.89 Yes -26 0.83 Yes 44 96.78 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 121194287 - NM_199420 POLQ 1 0.32 0.14 8 6.26 69.14 65 7.79 Yes 71 0.58 No 0 0 No -25 0.87 Yes 45 76.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121202397 - NM_199420 POLQ 1 0.49 0.22 14 7.65 77.44 29 5.38 No 68 0.53 No 0 0 No -22 0.7 Yes 48 57.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 121204028 - NM_199420 POLQ 1 2.41 0.69 37 1.13 0 30 6.56 Yes 17 1.4 Yes 0 0 No -29 0.88 Yes 41 89.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121205396 - NM_199420 POLQ 1 1.19 0.42 25 8.82 86.52 29 4.94 No 16 0.45 No 0 0 No -24 0.61 No 46 54.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121206357 - NM_199420 POLQ 1 0.48 0.17 10 3.03 87.98 21 4.69 No 8 0.99 Yes 0 0 No -20 0.93 Yes 50 94.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121212501 - NM_199420 POLQ 1 4.29 1.93 53 7.44 87.48 64 7.78 Yes 48 0.12 No 0 0 No -27 0.72 Yes 43 70.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121212501 - NM_199420 POLQ 1 0.67 0.31 16 7.44 87.48 64 7.78 Yes 48 0.12 No 0 0 No -27 0.72 Yes 43 70.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121212664 - NM_199420 POLQ 1 0.61 0.32 17 6.91 88.47 63 7.73 Yes 28 1.24 Yes 0 0 No -36 0.75 Yes 34 90.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121215330 - NM_199420 POLQ 1 0.27 0.13 7 9.25 83.08 33 6.16 Yes NA NA NA 0 0 No -33 0.42 No 37 66.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121225748 - NM_199420 POLQ 1 0.38 0.17 10 6.95 81.81 42 6.63 Yes 29 0.32 No 0 0 No -41 0.4 No 29 43.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121228295 - NM_199420 POLQ 1 2.26 0.94 36 9.19 84.9 32 6 Yes 19 1.76 Yes 0 0 No -31 0.87 Yes 39 95.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121228546 - NM_199420 POLQ 1 0.51 0.26 14 -3.61 0 47 7.33 Yes 11 1.6 Yes 0 0 No -57 0.35 No 18 57.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 121237392 - NM_199420 POLQ 1 0.53 0.14 9 7.68 83.68 35 6.46 Yes 29 0.55 No 0 0 No -34 0.87 Yes 36 92.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121248559 - NM_199420 POLQ 1 1.6 0.83 38 4.45 77.74 33 5.65 Yes 20 0.75 No 0 0 No -25 0.53 No 38 56.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121255797 - NM_199420 POLQ 1 0.21 0.13 8 6.35 94.94 23 3.26 No 39 0.84 Yes 0 0 No -21 0.57 No 43 72.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 121256462 - NM_199420 POLQ 1 0.81 0.28 15 6.22 78.92 19 3.57 No 47 0.51 No 0 0 No -27 0.28 No 40 31.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121257992 - NM_199420 POLQ 1 0.57 0.21 14 6.5 79.33 38 7.3 Yes 25 1.04 Yes 0 0 No -37 0.68 Yes 33 71.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121258349 - NM_199420 POLQ 1 0.83 0.43 20 4.15 74.87 30 5.88 Yes 66 -2.74 No 0 0 No -32 0.78 Yes 38 91.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121258425 - NM_199420 POLQ 1 0.4 0.15 11 0.49 0 20 4.28 No 30 0.71 No 0 0 No -42 0.75 Yes 28 78.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121259046 - NM_199420 POLQ 1 0.33 0.18 9 4.68 74.67 33 6.51 Yes 20 0.9 Yes 0 0 No -32 0.63 No 38 74.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 121262827 - NM_199420 POLQ 1 0.33 0.1 7 4.93 84.41 34 6.98 Yes 73 1.57 Yes 0 0 No -25 0.81 Yes 45 54.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 121263186 - NM_199420 POLQ 1 2.2 0.79 38 2.21 0 28 7.2 Yes 15 0.98 Yes 0 0 No -27 0.85 Yes 43 79.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86258585 - NM_015425 POLR1A 1 0.28 0.1 7 7.68 78.21 36 6.24 Yes 23 0.5 No 0 0 No -35 0.88 Yes 35 80.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 86258673 - NM_015425 POLR1A 1 0.62 0.24 15 3.43 77.85 13 5.1 No 67 -5.51 No 0 0 No -19 0.58 No 18 52.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 86261196 - NM_015425 POLR1A 1 0.17 0.14 8 6.42 78.44 18 5.29 No 5 0.99 Yes 0 0 No -21 0.7 Yes 53 44.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 86267324 - NM_015425 POLR1A 1 0.37 0.43 17 6.49 88.96 23 5.29 No 65 -3.38 No 22 0.71 Yes -22 0.74 Yes 48 81.77 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 86276478 - NM_015425 POLR1A 1 0.08 0.11 7 8.96 91.56 30 4.34 No 8 0.81 Yes 0 0 No -32 0.58 No 38 64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 86321295 - NM_015425 POLR1A 1 0.19 0.28 14 4.6 79.43 10 5.19 No 47 1.41 Yes 0 0 No -26 0.57 No 44 62.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 86325881 - NM_015425 POLR1A 1 0.25 0.4 18 2.62 72.46 36 8.99 Yes 23 1.68 Yes 0 0 No -35 0.95 Yes 35 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 113303241 + NM_001282772 POLR1B 1 0.16 0.15 9 4.18 0 30 7.59 Yes 32 2.06 Yes 0 0 No -29 0.5 No 41 61.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 113303407 + NM_001282772 POLR1B 1 2.71 2.44 63 7.73 86.87 26 7.55 Yes 13 1.41 Yes 25 0.9 Yes -25 0.95 Yes 45 95.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 113304659 + NM_001282772 POLR1B 1 1.64 1.32 46 2 72.5 38 6.17 Yes 25 0.22 No 23 0.7 Yes -20 0.59 No 50 55.79 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 113310962 + NM_001282772 POLR1B 1 0.51 0.32 19 3.29 0 26 8.92 Yes 13 1.6 Yes 0 0 No -32 0.64 No 38 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 113312100 + NM_001282772 POLR1B 1 1.43 1.01 40 5.88 58.14 36 5.1 No 74 1.17 Yes 35 0.63 Yes -38 0.46 No 32 67.35 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 113319433 + NM_001282772 POLR1B 1 0.32 0.39 22 8.5 87.01 43 7.35 Yes 70 -2.29 No 0 0 No -43 0.68 Yes 27 70.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 113323154 + NM_001282772 POLR1B 1 0.12 0.15 11 10.72 87.82 41 7.14 Yes 28 2.3 Yes 0 0 No -40 0.61 No 30 71.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 113324334 + NM_001282772 POLR1B 1 0.2 0.26 15 3.03 0 37 7.69 Yes 31 1.32 Yes 0 0 No -29 0.45 No 41 49.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43487806 + NM_001318876 POLR1C 1 1.31 1.97 62 -10.56 68.41 27 5.48 No 74 -4.35 No 0 0 No -26 0.95 Yes 44 90.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43487812 + NM_001318876 POLR1C 1 0.08 0.13 7 -17.79 0 13 3.87 No 64 -2.7 No 0 0 No -32 0.94 Yes 38 73.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43488053 + NM_001318876 POLR1C 1 0.14 0.25 15 -1.1 69.18 25 6.32 Yes 46 1.61 Yes 0 0 No -58 0.31 No 46 50.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43488069 + NM_001318876 POLR1C 1 0.25 0.46 27 6.35 90.27 13 5 No 62 1.61 Yes 0 0 No -22 0.53 No 52 36.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 28224178 + NM_001206559 POLR1D 1 6.86 18.71 72 6.46 80.25 30 6.08 Yes 47 -4.18 No 29 0.8 Yes -29 0.68 Yes 41 83.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 37493574 + NM_001282766 POLR1E 1 0.06 0.13 7 2.43 79.55 28 4.55 No 29 1.33 Yes 0 0 No -27 0.88 Yes 43 62.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 37503015 + NM_001282766 POLR1E 1 0.35 0.47 21 1.56 0 21 4.2 No 15 0.26 No 26 0.62 Yes -20 0.48 No 43 57.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 7389080 + NM_000937 POLR2A 1 0.05 0.11 8 10.19 92.17 28 5.29 No 57 1.36 Yes 0 0 No -27 0.7 Yes 43 47.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7411558 + NM_000937 POLR2A 1 0.07 0.24 13 3.84 71.7 32 5.66 Yes 19 0.19 No 18 0.88 Yes -31 0.88 Yes 39 84.94 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 7411674 + NM_000937 POLR2A 1 0.09 0.31 14 1.52 68.69 40 6.73 Yes 27 0.58 No 0 0 No -39 0.45 No 31 74.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7412713 + NM_000937 POLR2A 1 0.04 0.1 7 11.65 92.43 25 7.81 Yes 12 1.37 Yes 0 0 No -24 0.83 Yes 46 72.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7414745 + NM_000937 POLR2A 1 0.05 0.17 10 5.85 79.43 26 5.48 No 29 0.81 Yes 0 0 No -28 0.65 No 45 44.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 57876220 + NM_001303269 POLR2B 1 0.07 0.25 15 2.77 0 21 4.47 No 60 -5.25 No 0 0 No -35 0.38 No 46 61.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 57876594 + NM_001303269 POLR2B 1 0.05 0.17 10 4.28 78.41 54 8.77 Yes 41 2 Yes 0 0 No -31 0.96 Yes 39 95.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 57879027 + NM_001303269 POLR2B 1 0.05 0.18 11 3.64 87.36 32 7.94 Yes 19 1.5 Yes 0 0 No -31 0.95 Yes 39 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 57893655 + NM_001303269 POLR2B 1 0.15 0.54 28 5.47 83.82 19 5.48 No 6 1.12 Yes 0 0 No -18 0.61 No 52 85.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 57497567 + NM_032940 POLR2C 1 0.11 0.21 12 7.86 81.69 49 5.57 Yes -2 0.93 Yes 41 0.05 Yes -41 0.56 No 22 69.48 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 57502967 + NM_032940 POLR2C 1 0.14 0.25 16 7.9 90.04 19 6.3 Yes 6 1.18 Yes 0 0 No -18 0.85 Yes 52 92.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57503532 + NM_032940 POLR2C 1 0.22 0.32 18 5.98 79.86 25 5.57 Yes 76 -2.33 No 0 0 No -24 0.82 Yes 46 80.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 57504122 + NM_032940 POLR2C 1 0.5 0.94 37 -3.77 0 16 4.22 No 3 0.27 No 30 0.12 Yes -15 0.91 Yes 55 83.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 128609148 - NM_004805 POLR2D 1 2.22 4.43 69 6.25 79.01 39 6.55 Yes 64 0.76 No 0 0 No -34 0.52 No 36 53.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 128609148 - NM_004805 POLR2D 1 0.68 1.31 47 6.25 79.01 39 6.55 Yes 64 0.76 No 0 0 No -34 0.52 No 36 53.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1088681 - NM_001316323 POLR2E 1 0.29 1.85 53 8 86.9 17 5.2 No 48 1.64 Yes 24 0.14 Yes -20 0.54 No 50 37.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 1088713 - NM_001316323 POLR2E 1 0.05 0.28 17 4.51 0 10 4 No 16 1.68 Yes 0 0 No -28 0.88 Yes 42 91.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1089573 - NM_001316323 POLR2E 1 0.09 0.35 19 -1.03 0 13 4.24 No 9 -1.02 No 24 0.8 Yes -25 0.5 No 58 16.48 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1089958 - NM_001316323 POLR2E 1 0.13 0.56 24 -4 0 43 9.04 Yes 6 0.56 No 19 0.52 Yes -18 0.47 No 52 28.69 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1089960 - NM_001316323 POLR2E 1 0.07 0.32 17 -29.89 0 41 8.94 Yes 4 0.67 No 19 0.52 Yes -16 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1089965 - NM_001316323 POLR2E 1 2.01 8.58 72 -6.36 0 36 8.71 Yes -1 1 Yes 23 0.32 Yes -11 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 1089986 - NM_001316323 POLR2E 1 0.03 0.14 9 -5.37 0 15 6.26 Yes NA NA NA 23 0.32 Yes -33 0.48 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 1090141 - NM_001316323 POLR2E 1 0.04 0.19 14 1.69 0 32 7 Yes 19 0.83 Yes 27 0.79 Yes -31 0.84 Yes 39 88.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 1090181 - NM_001316323 POLR2E 1 0.02 0.1 7 2.6 71.61 18 5.29 No 38 -2.55 No 27 0.79 Yes -21 0.47 No 49 53.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 38362889 + NR_125371 POLR2F 1 0.05 0.13 8 11.35 89.78 40 6.78 Yes 76 -3.44 No 0 0 No -21 0.42 No 49 67.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62529230 + NM_002696 POLR2G 1 0.02 0.1 7 2.89 69.29 32 6.14 Yes -3 0.9 Yes 19 0.26 Yes -25 0.54 No 39 57.19 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 62530013 + NM_002696 POLR2G 1 0.92 3.65 68 7.83 90.72 21 5.2 No 8 1.29 Yes 20 0.89 Yes -20 0.75 Yes 50 89.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36605120 - NM_006233 POLR2I 1 0.06 0.19 10 3.4 77.02 28 5.48 No 53 1.03 Yes 0 0 No -27 0.92 Yes 43 89.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 102114030 - NM_006234 POLR2J 1 0.08 0.35 15 8.6 86.04 15 6.52 Yes 2 2.21 Yes 0 0 No -25 0.63 No 45 84.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 102116341 - NM_006234 POLR2J 1 0.51 0.28 16 7.65 93.7 30 6 Yes 39 1.37 Yes 0 0 No -29 0.76 Yes 41 47.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 44053239 - NR_003655 POLR2J4 1 2.24 0.14 9 6.64 69.49 43 7 Yes 62 0.81 Yes 0 0 No -28 0.66 Yes 30 67.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 44054379 - NR_003655 POLR2J4 1 4.92 2.54 66 -0.86 0 29 6.52 Yes 16 1.52 Yes 24 0.93 Yes -28 0.96 Yes 42 96.87 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 101163561 + NM_005034 POLR2K 1 0.04 0.15 9 -9.26 0 11 4.12 No 46 -3.41 No 31 0.31 Yes -18 0.44 No 60 30.67 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 101164053 + NM_005034 POLR2K 1 0.12 0.76 35 -9.7 79.38 24 5.38 No 36 0.95 Yes 0 0 No -27 0.45 No 43 52.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 101164355 + NM_005034 POLR2K 1 0.02 0.14 10 9.37 85.76 30 5.75 Yes 5 0.45 No 0 0 No -29 0.56 No 53 55.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 57999664 + NM_015532 POLR2M 1 0.28 0.28 15 7.96 91.54 15 3.29 No 2 0.45 No 23 0.9 Yes -23 0.42 No 47 68.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 58001153 + NM_015532 POLR2M 1 0.38 0.33 20 7.95 82.32 27 4.56 No 36 1.4 Yes 0 0 No -29 0.88 Yes 41 81.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 58001188 + NM_015532 POLR2M 1 0.1 0.1 7 2.13 71.2 33 5.73 Yes 71 1.38 Yes 0 0 No -32 0.56 No 38 49.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 58001382 + NM_015532 POLR2M 1 2.13 2.04 59 7.76 90.32 20 5.74 Yes 7 0.58 No 0 0 No -19 0.75 Yes 51 68.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 79745001 - NM_007055 POLR3A 1 1.27 0.63 35 6.75 94.42 26 4.59 No 7 0.77 No 0 0 No -25 0.91 Yes 45 88.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 79756599 - NM_007055 POLR3A 1 0.33 0.24 15 7.38 88.97 32 7.14 Yes 19 1.08 Yes 0 0 No -31 0.88 Yes 39 86.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 79771431 - NM_007055 POLR3A 1 1.26 0.6 24 10.71 79.01 35 6 Yes 22 1.89 Yes 0 0 No -29 0.63 No 36 81.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 79780381 - NM_007055 POLR3A 1 0.16 0.11 8 4.99 81.99 18 5.39 No 72 1.16 Yes 0 0 No -22 0.66 No 53 77.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 106857235 + NM_018082 POLR3B 1 0.52 0.15 8 5.24 67.55 16 5.29 No 69 -5.03 No 22 0.66 Yes -30 0.58 No 40 84.76 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 106892999 + NM_018082 POLR3B 1 0.65 0.25 15 7.93 85.12 26 6.79 Yes 13 2.02 Yes 0 0 No -25 0.73 Yes 45 68.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 145597579 - NM_006468 POLR3C 1 0.19 0.26 15 -0.97 0 18 5.09 No 5 1.59 Yes 25 0.9 Yes -21 0.56 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 145598093 - NM_006468 POLR3C 1 0.12 0.17 10 7.54 78.38 33 6.05 Yes 57 1.29 Yes 0 0 No -32 0.6 No 38 58.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 145601639 - NM_006468 POLR3C 1 1.04 1.19 46 6.73 76.84 16 5.57 Yes -4 0.22 No 24 0.86 Yes -21 0.8 Yes 49 85.71 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 145601823 - NM_006468 POLR3C 1 0.14 0.14 9 3.89 81.9 18 5.38 No 32 1.31 Yes 0 0 No -56 0.7 Yes 14 55.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 22104575 + NM_001722 POLR3D 1 0.29 0.22 15 10.1 94.24 18 8.69 Yes 27 1.48 Yes 0 0 No -27 0.67 Yes 42 58.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 22320249 + NM_001258035 POLR3E 1 0.24 0.28 16 0.62 0 35 6.24 Yes 45 -3.9 No 27 0.83 Yes -34 0.93 Yes 36 87.2 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 22320295 + NM_001258035 POLR3E 1 1.84 2.15 62 3.54 74.63 21 6.81 Yes 68 -4.47 No 27 0.83 Yes -20 0.47 No 42 47.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 22320752 + NM_001258035 POLR3E 1 0.17 0.21 12 -0.2 0 29 7.21 Yes 16 1.53 Yes 0 0 No -28 0.93 Yes 42 95.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 22321171 + NM_001258035 POLR3E 1 0.28 0.31 18 3.69 79.15 22 4.39 No 9 0.3 No 24 0.94 Yes -24 0.72 Yes 46 81.58 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 22324945 + NM_001258035 POLR3E 1 2.16 2.01 62 -6.78 0 32 5.65 Yes 19 0.1 No 24 0.89 Yes -31 0.48 No 45 52.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 22325402 + NM_001258035 POLR3E 1 4.5 2.72 67 5.34 89.73 25 5.57 Yes 12 0.08 No 0 0 No -28 0.78 Yes 46 74.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 22330151 + NM_001258035 POLR3E 1 0.76 0.64 30 3.04 0 28 7.75 Yes 15 1.76 Yes 0 0 No -27 0.87 Yes 43 92.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 22337991 + NM_001258035 POLR3E 1 2.56 1.13 45 8.69 85.12 38 5.91 Yes 18 0.73 No 0 0 No -30 0.67 Yes 40 68.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 22339842 + NM_001258035 POLR3E 1 0.59 0.26 15 5.98 0 15 4.58 No 19 0.75 No 0 0 No -31 0.72 Yes 39 94.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 22343389 + NM_001258035 POLR3E 1 1.08 0.76 33 -2.09 0 13 4.24 No 17 1.09 Yes 0 0 No -35 0.46 No 35 75.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 22343443 + NM_001258035 POLR3E 1 0.92 0.56 28 -1.05 60.14 45 7.64 Yes 71 1.08 Yes 26 0.8 Yes -26 0.6 No 12 44 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr20 18455347 + NM_001282526 POLR3F 1 0.47 0.24 12 4.99 85.02 20 6.08 Yes 63 1.36 Yes 0 0 No -19 0.89 Yes 51 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 18462266 + NM_001282526 POLR3F 1 2.5 1.19 47 0.84 0 22 8 Yes 9 1.58 Yes 0 0 No -21 0.69 Yes 49 81.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 89782028 + NM_006467 POLR3G 1 0.16 0.13 8 6.68 74.69 29 5.74 Yes 9 0.77 Yes 0 0 No -24 0.32 No 46 33.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 89786409 + NM_006467 POLR3G 1 31.24 12.96 72 10.07 88.27 30 7.71 Yes 17 2.13 Yes 29 0.92 Yes -29 0.86 Yes 41 94.86 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 89797725 + NM_006467 POLR3G 1 17.25 7.65 71 2.9 94.58 23 4.8 No 10 1.05 Yes 0 0 No -22 0.9 Yes 48 94.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 89807849 + NM_006467 POLR3G 1 0.51 0.18 11 4.56 69.85 30 6.76 Yes 10 0.92 Yes 26 0.76 Yes -29 0.82 Yes 41 84.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 145458004 - NM_001330685 POLR3GL 1 1083.85 63.56 72 8.57 83.21 18 4.76 No 5 1.59 Yes 25 0.4 Yes -24 0.4 No 46 45.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 41925123 - NM_001282884 POLR3H 1 0.21 0.26 11 9.04 78.82 31 5.83 Yes 66 -2.51 No 0 0 No -30 0.64 No 40 54.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 41928153 - NM_001282884 POLR3H 1 0.28 0.38 21 5.71 0 12 4.24 No 17 1.41 Yes 0 0 No -37 0.74 Yes 33 79.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41929692 - NM_001282884 POLR3H 1 2.49 1.68 60 9.21 94.23 19 6.9 Yes 6 1.6 Yes 18 0.74 Yes -18 0.58 No 45 75.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 41931090 - NM_001282884 POLR3H 1 0.27 0.22 13 4.33 64.66 20 5.57 Yes 75 -3.08 No 0 0 No -33 0.31 No 37 26.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 100881 - NM_016310 POLR3K 1 0.05 0.15 9 6.29 72.68 28 5.57 Yes 38 1.28 Yes 0 0 No -27 0.47 No 43 53.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 100905 - NM_016310 POLR3K 1 0.25 0.81 35 3.44 71.87 27 7.79 Yes 14 1.28 Yes 0 0 No -26 0.95 Yes 44 91.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 97556 - NM_016310 POLR3K 1 0.05 0.18 13 -6 71.16 25 6.36 Yes 12 0.9 Yes 0 0 No -24 0.53 No 37 57.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 617871 - NM_005035 POLRMT 1 2.86 2.36 60 8.91 89.41 18 4.9 No 5 0.76 No 33 0.13 Yes -17 0.7 Yes 53 85.7 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 618282 - NM_005035 POLRMT 1 1 0.68 30 9.85 81.08 30 5.1 No 45 0.87 Yes 0 0 No -24 0.72 Yes 46 87.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 618317 - NM_005035 POLRMT 1 0.36 0.29 16 6.44 70.71 23 5.39 No 10 0.85 Yes 0 0 No -22 0.79 Yes 48 79.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 618583 - NM_005035 POLRMT 1 0.1 0.1 7 -0.62 0 51 7.39 Yes 38 -1.6 No 0 0 No -27 0.57 No 43 59.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 618754 - NM_005035 POLRMT 1 0.19 0.13 9 0.9 0 10 4 No 17 1.99 Yes 22 0.98 Yes -29 0.96 Yes 41 95.33 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 619258 - NM_005035 POLRMT 1 0.2 0.11 7 6.9 80.96 18 5.74 Yes 5 1.19 Yes 0 0 No -17 0.64 No 53 82.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 619688 - NM_005035 POLRMT 1 1.41 0.68 37 1.7 73.04 13 5.03 No 0 -0.88 No 0 0 No -20 0.86 Yes 50 60.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 622744 - NM_005035 POLRMT 1 0.95 0.72 31 1.75 0 16 4.23 No 14 1.47 Yes 0 0 No -26 0.93 Yes 44 93.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 624954 - NM_005035 POLRMT 1 0.41 0.24 15 0.85 56.71 28 5.57 Yes 54 -2.75 No 0 0 No -27 0.95 Yes 43 69.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 625213 - NM_005035 POLRMT 1 0.42 0.22 13 2.98 74.73 34 6 Yes 50 1.49 Yes 29 0.4 Yes -33 0.7 Yes 50 63.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 72367444 + NM_172020 POM121 1 0.29 0.31 19 6.74 87.09 23 6.18 Yes 71 1.25 Yes 0 0 No -22 0.7 Yes 48 77.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72371567 + NM_172020 POM121 1 5.56 5.25 70 8.81 91.45 29 5.57 Yes 41 0.58 No 0 0 No -28 0.54 No 17 76.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 72371572 + NM_172020 POM121 1 0.98 0.92 39 -0.07 0 34 5.98 Yes 46 0.58 No 0 0 No -33 0.47 No 12 79.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 72383614 + NM_172020 POM121 1 13.96 13.5 72 1.45 70.86 42 7.09 Yes 63 1.5 Yes 0 0 No -28 0.75 Yes 42 69.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 72383628 + NM_172020 POM121 1 3.41 3.28 68 0.55 75.06 23 4.8 No 10 0.57 No 0 0 No -22 0.73 Yes 48 63.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 72384301 + NM_172020 POM121 1 28.56 27.38 72 10.81 80.95 39 7.14 Yes 13 1.57 Yes 25 0.7 Yes -25 0.73 Yes 45 78.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 72396863 + NM_172020 POM121 1 0.3 0.22 12 4.72 78.17 25 4.74 No 74 0.78 Yes 0 0 No -30 0.63 No 40 33.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72410391 + NM_172020 POM121 1 0.13 0.21 12 5.13 0 9 3.87 No 8 0.5 No 0 0 No -32 0.56 No 40 35.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 75054473 - NM_001099415 POM121C 1 0.08 0.14 9 5.13 0 9 3.87 No 8 0.5 No 0 0 No -32 0.56 No 40 35.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 75083244 - NM_001099415 POM121C 1 0.21 0.15 10 4.57 73.67 49 7.19 Yes 28 0.49 No 0 0 No -40 0.59 No 30 54.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 75084269 - NM_001099415 POM121C 1 0.54 0.43 21 -3.63 0 27 5.2 No 14 0.57 No 0 0 No -26 0.6 No 48 55.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 75084273 - NM_001099415 POM121C 1 0.95 0.74 37 -1.4 75.06 23 4.8 No 10 0.57 No 0 0 No -22 0.76 Yes 48 59.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 75084287 - NM_001099415 POM121C 1 1.29 0.96 37 1.9 70.86 42 6.57 Yes 63 1.4 Yes 0 0 No -28 0.7 Yes 42 67.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 75095358 - NM_001099415 POM121C 1 0.17 0.13 9 0.86 0 34 5.98 Yes 35 1.19 Yes 0 0 No -33 0.45 No 37 66.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 75095363 - NM_001099415 POM121C 1 6.95 5.03 72 7.89 91.45 29 5.57 Yes 30 1.19 Yes 0 0 No -28 0.53 No 42 67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 75102888 - NM_001099415 POM121C 1 0.32 0.19 12 8.36 90.11 34 10.18 Yes 21 0.44 No 0 0 No -33 0.89 Yes 37 93.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 75113534 - NM_001099415 POM121C 1 34.68 2.25 60 11.65 85.51 21 5.08 No 8 1.88 Yes 24 0.84 Yes -24 0.76 Yes 46 82.46 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 75113578 - NM_001099415 POM121C 1 13.96 0.99 45 7.8 94.81 17 4.92 No 33 0.7 No 0 0 No -25 0.97 Yes 45 96.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 75113597 - NM_001099415 POM121C 1 1.41 0.1 7 9.26 88.57 27 5.74 Yes 14 0.7 No 0 0 No -26 0.84 Yes 40 67.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 46659552 - NM_001243766 POMGNT1 1 0.19 0.17 10 6.78 84.44 26 6.28 Yes 53 1.05 Yes 0 0 No -25 0.95 Yes 45 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46660068 - NM_001243766 POMGNT1 1 0.39 0.26 17 -4.25 0 9 3.87 No 63 0.55 No 0 0 No -25 0.57 No 43 44.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46661615 - NM_001243766 POMGNT1 1 0.57 0.21 12 0.11 70.65 19 5.59 Yes 6 0.11 No 23 0.97 Yes -18 0.65 No 52 87.92 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 46662753 - NM_001243766 POMGNT1 1 0.36 0.22 14 3.27 0 28 6.18 Yes 15 0.72 No 0 0 No -27 0.69 Yes 43 64.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 42964706 + NM_032237 POMK 1 0.18 0.1 7 5.55 83.92 33 5.46 No 31 0.84 Yes 0 0 No -32 0.54 No 38 69.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 42972575 + NM_032237 POMK 1 0.36 0.19 10 7.66 88.72 20 6.77 Yes 55 0.38 No 0 0 No -34 0.38 No 36 46.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 29233955 + NM_015932 POMP 1 0.17 1.42 47 6.3 82.53 28 7.52 Yes 44 -0.09 No 30 0.55 Yes -27 0.4 No 43 62.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 29233958 + NM_015932 POMP 1 0.04 0.29 19 1.76 73.48 31 7.7 Yes -3 0.07 No 30 0.55 Yes -30 0.42 No 40 66.94 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 29238646 + NM_015932 POMP 1 0.07 1.19 48 -9.53 0 29 4.76 No 16 1.31 Yes 0 0 No -28 0.64 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 29238647 + NM_015932 POMP 1 0.1 1.81 50 -21.29 0 30 4.81 No 17 1.31 Yes 0 0 No -29 0.63 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 29242615 + NM_015932 POMP 1 0.01 0.31 18 1.84 0 15 3.54 No 51 2.03 Yes 0 0 No -28 0.42 No 36 44.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 29242834 + NM_015932 POMP 1 0.02 0.18 13 12.77 82.13 33 7.86 Yes 46 0.89 Yes 0 0 No -32 0.49 No 38 66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 29246053 + NM_015932 POMP 1 0.01 0.18 10 0.94 73.65 21 6.4 Yes 38 -4.33 No 0 0 No -20 0.73 Yes 50 68.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 29246437 + NM_015932 POMP 1 0.01 0.22 8 -4.49 75.16 36 5.02 No 71 0.72 No 29 0.91 Yes -28 0.49 No 47 64.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr13 29246481 + NM_015932 POMP 1 0.04 0.5 27 -1.44 0 10 3.73 No 23 1.74 Yes 0 0 No -35 0.88 Yes 35 92.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 29250327 + NM_015932 POMP 1 0.01 0.13 7 6.15 80.12 21 7.21 Yes 8 1.24 Yes 0 0 No -20 0.76 Yes 50 90.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134384932 + NM_001136113 POMT1 1 0.6 0.1 7 6.21 80.47 45 9.38 Yes 61 1.27 Yes 0 0 No -31 0.6 No 39 79.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 134394084 + NM_001136113 POMT1 1 5.58 1.28 46 7.48 88.65 29 5.57 Yes 74 1.11 Yes 0 0 No -28 0.73 Yes 42 70.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134394780 + NM_001136113 POMT1 1 0.62 0.13 7 1.25 0 51 7.79 Yes 61 1.72 Yes 22 0.73 Yes -40 0.51 No 30 65.57 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 134397366 + NM_001136113 POMT1 1 0.6 0.11 7 2.15 68.01 22 5.29 No 59 -3.41 No 0 0 No -21 0.72 Yes 48 65.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 77745202 - NM_013382 POMT2 1 1.66 0.14 9 -0.07 0 14 4.47 No 24 -0.59 No 0 0 No -36 0.84 Yes 34 89.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 77745930 - NM_013382 POMT2 1 3.93 0.19 12 6.34 74.04 21 6.52 Yes 8 1.28 Yes 20 0.64 Yes -23 0.45 No 47 55.8 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 77745966 - NM_013382 POMT2 1 4.16 0.24 16 4.54 57.98 30 6.74 Yes 17 0.73 No 20 0.64 Yes -29 0.65 No 41 62.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 77750684 - NM_013382 POMT2 1 2.8 0.33 19 0.94 70.31 30 4.98 No 75 0.79 Yes 0 0 No -29 0.68 Yes 41 69.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 77758008 - NM_013382 POMT2 1 1.11 0.14 8 8.66 80.86 18 5.13 No 5 1.11 Yes 0 0 No -25 0.64 No 46 41.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 77772204 - NM_013382 POMT2 1 0.61 0.13 7 9.34 81.96 30 7.85 Yes 17 0.79 Yes 0 0 No -29 0.88 Yes 41 94.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 76247933 - NM_152992 POMZP3 1 12 6.71 72 12.11 94.25 28 10.44 Yes 37 1.12 Yes 27 0.69 Yes -27 0.8 Yes 43 68.8 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 76247933 - NM_152992 POMZP3 1 0.43 0.24 12 12.11 94.25 28 10.44 Yes 37 1.12 Yes 27 0.69 Yes -27 0.8 Yes 43 68.8 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr7 95041056 - NM_000305 PON2 1 18.69 4.81 67 2.67 71.59 34 5.99 Yes 47 1.45 Yes 24 0.77 Yes -33 0.7 Yes 37 78.66 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 95041764 - NM_000305 PON2 1 2.69 0.54 30 -2.04 0 13 4.36 No 37 0.78 Yes 0 0 No -50 0.48 No 20 43.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 99153365 + NM_015029 POP1 1 0.1 0.15 11 6.46 83.82 17 4.8 No 29 1.69 Yes 0 0 No -35 0.48 No 35 86.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 99153424 + NM_015029 POP1 1 0.17 0.25 15 5.6 80.06 51 7.81 Yes 38 0.57 No 0 0 No -29 0.42 No 36 47.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 99161135 + NM_015029 POP1 1 0.07 0.14 9 4.29 84.4 30 5.47 No 40 0.24 No 0 0 No -24 0.59 No 46 50.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 99161138 + NM_015029 POP1 1 0.06 0.1 7 2.69 84.99 33 5.74 Yes 43 0.24 No 0 0 No -27 0.6 No 43 53.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 99163748 + NM_015029 POP1 1 0.2 0.35 18 7.63 75.54 33 7.07 Yes 20 1.15 Yes 0 0 No -32 0.9 Yes 38 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99165791 + NM_015029 POP1 1 0.07 0.13 7 3.01 0 35 6.92 Yes 22 2.55 Yes 0 0 No -34 0.94 Yes 36 94.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99169150 + NM_015029 POP1 1 0.37 0.31 18 4.74 84.41 25 7.75 Yes 37 2.47 Yes 0 0 No -24 0.91 Yes 46 89.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99170059 + NM_015029 POP1 1 0.09 0.1 7 4.63 76.26 22 5.45 No 9 0.91 Yes 0 0 No -21 0.95 Yes 49 95.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 30101146 + NM_006627 POP4 1 0.15 0.33 18 6.97 79.31 17 5.22 No 4 1.1 Yes 22 0.91 Yes -22 0.9 Yes 48 87.57 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 30101226 + NM_006627 POP4 1 0.23 0.5 29 6.35 88.99 29 5.83 Yes 41 -2.03 No 28 0.66 Yes -28 0.66 No 42 57.57 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 30104816 + NM_006627 POP4 1 0.14 0.22 14 6.6 81.92 38 6.93 Yes 55 0.88 Yes 0 0 No -37 0.44 No 33 51.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 121017213 - NM_198202 POP5 1 0.08 0.13 7 -14.6 73.05 28 6.21 Yes 15 0.63 No 0 0 No -27 0.91 Yes 43 86.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 121017249 - NM_198202 POP5 1 0.25 0.31 16 0.53 67.62 19 4.82 No 17 0.02 No 24 0.83 Yes -23 0.55 No 47 35.52 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 121017727 - NM_198202 POP5 1 1412.74 148.14 72 9.24 80.75 21 6.4 Yes 8 0.53 No 26 0.71 Yes -26 0.68 Yes 44 66.43 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 121017727 - NM_198202 POP5 1 2.06 0.24 15 9.24 80.75 21 6.4 Yes 8 0.53 No 26 0.71 Yes -26 0.68 Yes 44 66.43 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 100304120 + NM_005837 POP7 1 0.12 0.19 11 1.83 0 30 8 Yes 17 -0.47 No 0 0 No -29 0.74 Yes 41 91.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 75600304 + NM_000941 POR 1 0.42 0.4 22 2.95 0 57 8.83 Yes 44 1.42 Yes 29 0.56 Yes -29 0.34 No 41 34.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 75613116 + NM_000941 POR 1 0.21 0.22 14 6.84 78 24 5.76 Yes 63 1.23 Yes 0 0 No -23 0.58 No 47 60.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 75615627 + NM_000941 POR 1 0.18 0.14 7 -4.48 0 14 4.24 No 53 -2.09 No 20 0.45 Yes -28 0.47 No 57 32.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 75615634 + NM_000941 POR 1 0.75 0.69 31 -2.8 0 10 4 No 60 -2.08 No 20 0.45 Yes -35 0.36 No 50 43.64 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 48369753 + NM_203474 PORCN 1 52.88 8.33 71 7.41 83.07 22 5.25 No 67 0.49 No 21 0.81 Yes -21 0.92 Yes 49 94.87 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chrX 48374696 + NM_203474 PORCN 1 0.5 0.13 7 9.15 91.82 39 7.28 Yes 26 1.69 Yes 0 0 No -38 0.75 Yes 32 80.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 124505354 - NR_003102 POT1 1 0.22 0.11 7 5.27 90.15 17 4.51 No 55 -4.1 No 0 0 No -17 0.37 No 53 51.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 124506401 - NR_003102 POT1 1 0.17 0.11 7 5.69 82.05 25 6.1 Yes 3 0.96 Yes 0 0 No -19 0.36 No 51 55.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 124532143 - NR_003102 POT1 1 0.42 0.29 15 3.64 66.1 27 4.82 No 37 1.64 Yes 0 0 No -26 0.76 Yes 44 78.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 124532870 - NR_003102 POT1 1 1.41 1.19 46 9.3 92.91 27 6.32 Yes 14 0.61 No 26 0.83 Yes -26 0.89 Yes 44 84.54 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 124557013 - NR_003102 POT1 1 0.19 0.17 10 7.42 82.73 28 7.93 Yes 15 1.38 Yes 0 0 No -27 0.93 Yes 43 93.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 124569051 - NR_003102 POT1 1 39.59 12.43 72 4.11 84.51 42 7.3 Yes 29 1.21 Yes 23 0.74 Yes -24 0.32 No 34 40.22 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 111225117 - NM_006235 POU2AF1 1 0.03 0.22 15 7.35 84.32 14 5.11 No NA NA NA 0 0 No -21 0.78 Yes 49 87.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 111225563 - NM_006235 POU2AF1 1 0.09 0.67 35 7.69 80.92 27 4.58 No 27 1.82 Yes 0 0 No -26 0.83 Yes 44 83.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 111227159 - NM_006235 POU2AF1 1 1.78 13.33 72 11.63 92.92 27 7.84 Yes 59 -0.23 No 0 0 No -26 0.74 Yes 44 83.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 111228461 - NM_006235 POU2AF1 1 0.66 2.82 66 0.23 61.67 20 5.76 Yes 74 -3.64 No 28 0.81 Yes -19 0.83 Yes 51 80.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 111229638 - NM_006235 POU2AF1 1 0.14 1.11 48 0.31 0 11 3.87 No 66 -3.84 No 0 0 No -26 0.76 Yes 44 89.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 111229662 - NM_006235 POU2AF1 1 0.1 0.74 31 -2.71 76.06 21 4.9 No 74 -5.36 No 20 0.59 Yes -20 0.84 Yes 50 48.35 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 111231642 - NM_006235 POU2AF1 1 0.02 0.13 8 6.59 90.95 26 5.1 No 64 0.48 No 0 0 No -25 0.72 Yes 21 87.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 111234008 - NM_006235 POU2AF1 1 0.02 0.15 7 7.77 84.09 29 5.66 Yes 48 1.18 Yes 0 0 No -31 0.51 No 39 40.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 111234160 - NM_006235 POU2AF1 1 0.59 4.93 68 6.85 74.81 27 6.64 Yes 33 0.61 No 26 0.71 Yes -26 0.75 Yes 44 53.53 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 111234715 - NM_006235 POU2AF1 1 0.62 4.97 71 5.82 78.31 59 8.37 Yes 46 0.75 No 0 0 No -24 0.45 No 25 46.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 111244208 - NM_006235 POU2AF1 1 0.05 0.43 24 7.41 84.46 33 4.16 No 67 0.91 Yes 0 0 No -27 0.71 Yes 43 82.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 167307206 + NM_001198783 POU2F1 1 5.25 2.36 62 11.41 87.57 28 5.74 Yes 15 0.22 No 27 0.58 Yes -27 0.59 No 43 47.7 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 167356417 + NM_001198783 POU2F1 1 0.32 0.13 8 9.22 79.79 37 6.25 Yes 24 1.98 Yes 26 0.92 Yes -26 0.96 Yes 44 96.63 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 167365769 + NM_001198783 POU2F1 1 0.43 0.28 17 8.58 94.73 22 8.4 Yes 9 1.12 Yes 21 0.89 Yes -21 0.74 Yes 49 49.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 167383098 + NM_001198783 POU2F1 1 1.29 0.4 22 4.45 76.36 29 4.97 No 16 0.62 No 0 0 No -28 0.65 No 46 59.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 167385285 + NM_001198783 POU2F1 1 0.73 0.22 13 7.74 92.1 29 6.89 Yes 16 1.05 Yes 28 0.89 Yes -28 0.7 Yes 42 79.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42596093 - NM_001207025 POU2F2 1 9.09 8.24 72 10.25 90.46 25 7 Yes 12 2.1 Yes 24 0.94 Yes -24 0.9 Yes 46 94.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42596287 - NM_001207025 POU2F2 1 8.6 7.99 72 4.53 68.8 48 7.78 Yes 35 1.09 Yes 29 0.78 Yes -47 0.8 Yes 23 78.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42599609 - NM_001207025 POU2F2 1 0.13 0.32 18 -1.89 0 14 3.84 No 13 1.46 Yes 0 0 No -25 0.93 Yes 45 92.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42599844 - NM_001207025 POU2F2 1 0.12 0.26 15 -8.97 58.58 23 6.54 Yes 10 1.71 Yes 0 0 No -28 0.96 Yes 42 89.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42600348 - NM_001207025 POU2F2 1 74.84 58.83 72 9.64 80.19 43 7.43 Yes 30 1.74 Yes 23 0.71 Yes -27 0.54 No 47 35.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 42605231 - NM_001207025 POU2F2 1 0.06 0.14 10 4.71 84.17 27 5.2 No 62 -0.33 No 0 0 No -26 0.73 Yes 44 66.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 42614909 - NM_001207025 POU2F2 1 1.37 2.81 64 8.47 81.65 41 7.14 Yes 73 1.25 Yes 18 0.58 Yes -30 0.77 Yes 40 84.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42614909 - NM_001207025 POU2F2 1 0.08 0.17 12 8.47 81.65 41 7.14 Yes 73 1.25 Yes 18 0.58 Yes -30 0.77 Yes 40 84.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42618094 - NM_001207025 POU2F2 1 0.05 0.1 7 5.62 81.17 19 4.5 No 6 1.18 Yes 0 0 No -30 0.73 Yes 40 71.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42621158 - NM_001207025 POU2F2 1 0.96 2.08 58 6.61 72.72 71 9.22 Yes 58 3.12 Yes 28 0.79 Yes -28 0.61 No 29 61.11 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 42621265 - NM_001207025 POU2F2 1 0.14 0.28 18 12.07 86.41 33 7.62 Yes 20 1.87 Yes 0 0 No -32 0.98 Yes 38 97.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42621585 - NM_001207025 POU2F2 1 8.93 12.67 72 10.75 94.27 41 7.28 Yes 66 1.42 Yes 26 0.36 Yes -26 0.82 Yes 44 87.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 42621965 - NM_001207025 POU2F2 1 0.33 0.47 24 12.43 95.65 31 5.57 Yes 38 0.17 No 0 0 No -24 0.79 Yes 46 66.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 42626905 - NM_001207025 POU2F2 1 0.61 0.64 32 6.88 86.3 24 5.48 No 70 1.49 Yes 0 0 No -23 0.8 Yes 47 87.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42626963 - NM_001207025 POU2F2 1 0.54 0.64 32 -7.22 78.84 25 6.75 Yes 12 1.52 Yes 0 0 No -24 0.92 Yes 46 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42628449 - NM_001207025 POU2F2 1 2.79 3.03 62 4.19 0 50 7.13 Yes 61 2.12 Yes 0 0 No -44 0.61 No 32 82.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 42628453 - NM_001207025 POU2F2 1 0.21 0.22 14 2.12 84.41 46 6.85 Yes 57 2.13 Yes 0 0 No -34 0.64 No 36 81.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 42634652 - NM_001207025 POU2F2 1 1.05 1.15 43 7.15 79.03 27 6.22 Yes 69 2.17 Yes 0 0 No -26 0.79 Yes 44 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 71964671 - NM_021129 PPA1 1 0.06 0.93 42 -11.45 0 28 5.63 Yes 15 0.72 No 0 0 No -27 0.9 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 71969440 - NM_021129 PPA1 1 0.02 0.32 20 -9.15 0 66 7.26 Yes 20 1.86 Yes 0 0 No -32 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 71970176 - NM_021129 PPA1 1 0.06 0.74 37 10.09 83.32 23 8.36 Yes 10 1.56 Yes 22 0.83 Yes -22 0.66 No 48 69.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 71982409 - NM_021129 PPA1 1 0.06 0.67 28 6.09 86.36 17 5.18 No 71 0.51 No 0 0 No -32 0.42 No 37 38.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 71989213 - NM_021129 PPA1 1 0.19 2 63 6.93 89.17 20 4.9 No 7 0.4 No 0 0 No -20 0.59 No 50 52.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 71990155 - NM_021129 PPA1 1 0.06 0.5 24 -14.44 0 25 4.44 No 12 1.3 Yes 29 0.34 Yes -24 0.41 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 106305043 - NM_176869 PPA2 1 0.2 0.68 32 6.89 76.05 31 6.07 Yes -2 -1.68 No 0 0 No -33 0.73 Yes 37 89.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 106306552 - NM_176869 PPA2 1 0.1 0.38 17 3.44 72.04 74 9.7 Yes 61 1.41 Yes 0 0 No -69 0.11 No 28 29.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 106320025 - NM_176869 PPA2 1 0.17 0.53 25 8.61 80.93 48 8.08 Yes 35 0.66 No 21 0.45 Yes -35 0.39 No 35 65.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 106320320 - NM_176869 PPA2 1 0.07 0.19 11 -13.04 0 34 7.86 Yes 64 0.74 No 0 0 No -34 0.54 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 106323395 - NM_176869 PPA2 1 0.2 0.58 29 11.26 87.82 33 6.69 Yes 20 1.72 Yes 0 0 No -32 0.85 Yes 38 93.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 106327106 - NM_176869 PPA2 1 1.05 2.93 65 9.86 93.92 23 5.75 Yes 10 1.66 Yes 22 0.82 Yes -22 0.67 Yes 48 57.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 106327106 - NM_176869 PPA2 1 0.19 0.5 28 9.86 93.92 23 5.75 Yes 10 1.66 Yes 22 0.82 Yes -22 0.67 Yes 48 57.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 106327106 - NM_176869 PPA2 1 0.03 0.1 7 9.86 93.92 23 5.75 Yes 10 1.66 Yes 22 0.82 Yes -22 0.67 Yes 48 57.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr4 106335995 - NM_176869 PPA2 1 0.05 0.17 10 6.81 87.04 32 4.02 No 5 1.94 Yes 0 0 No -31 0.65 No 39 82.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 106341583 - NM_176869 PPA2 1 0.26 0.76 34 5.67 85.12 30 6.73 Yes 17 0.05 No 0 0 No -29 0.49 No 41 59.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 106342810 - NM_176869 PPA2 1 0.16 0.44 26 10.52 93.32 88 9.36 Yes 60 1.06 Yes 0 0 No -34 0.54 No 36 74.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 106343591 - NM_176869 PPA2 1 1.25 3.58 65 7.13 79.34 34 6.5 Yes 21 1.4 Yes 0 0 No -33 0.76 Yes 37 80.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 106344539 - NM_176869 PPA2 1 1.17 3.32 65 8.97 93.55 46 9.29 Yes 33 1.97 Yes 30 0.49 Yes -45 0.66 Yes 25 77.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 106355319 - NM_176869 PPA2 1 0.58 1.9 52 8.46 81.34 29 6.32 Yes 30 1.17 Yes 0 0 No -31 0.55 No 39 65.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 106355319 - NM_176869 PPA2 1 0.05 0.17 9 8.46 81.34 29 6.32 Yes 30 1.17 Yes 0 0 No -31 0.55 No 39 65.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 106358624 - NM_176869 PPA2 1 0.19 0.61 29 10.81 86.86 34 6.63 Yes 21 1.63 Yes 0 0 No -33 0.85 Yes 37 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 106362306 - NM_176869 PPA2 1 0.1 0.39 22 7.48 90.82 16 6.16 Yes 57 1.42 Yes 0 0 No -30 0.55 No 32 51.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 106372713 - NM_176869 PPA2 1 0.1 0.31 15 8.84 91.06 24 8 Yes 11 0.39 No 0 0 No -23 0.89 Yes 47 85.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 106377449 - NM_176869 PPA2 1 1.51 4.07 68 8.58 87.49 23 3.85 No 74 1.33 Yes 25 0.9 Yes -25 0.59 No 45 64.17 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 106394536 - NM_176869 PPA2 1 0.45 1.04 42 -4.71 87.64 27 5.39 No 14 1.19 Yes 0 0 No -26 0.73 Yes 44 91.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 106394933 - NM_176869 PPA2 1 1 2.1 61 5.96 76.73 26 9.29 Yes NA NA NA 25 0.27 Yes -25 0.45 No 37 53.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 46548546 + NM_005036 PPARA 1 9.38 0.53 30 1.93 69.16 34 6.32 Yes 21 1.27 Yes 0 0 No -33 0.86 Yes 37 88.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 46571885 + NM_005036 PPARA 1 18.9 1.32 50 7.66 85.04 35 5.29 No 34 0.5 No 33 0.11 Yes -35 0.66 No 37 75.62 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 46599471 + NM_005036 PPARA 1 10 2.64 65 6.47 79.26 27 6.55 Yes 14 0.68 No 0 0 No -26 0.67 Yes 44 80.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 46631024 + NM_005036 PPARA 1 1.57 0.28 13 5.5 81.23 36 5.89 Yes 11 1.16 Yes 28 0.78 Yes -23 0.84 Yes 41 72.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 35316139 + NM_177435 PPARD 1 9.03 2.22 61 11.11 92.44 32 5.66 Yes 19 0.87 Yes 0 0 No -31 0.61 No 39 69.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 35316690 + NM_177435 PPARD 1 1.24 0.29 18 5.71 73.12 24 6.16 Yes 11 1.11 Yes 0 0 No -23 0.73 Yes 47 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35316693 + NM_177435 PPARD 1 0.99 0.24 15 4.39 84.15 27 6.39 Yes 14 1.1 Yes 0 0 No -26 0.81 Yes 44 85.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35319354 + NM_177435 PPARD 1 0.97 0.26 14 1.01 0 41 8.3 Yes 28 1.27 Yes 0 0 No -40 0.67 Yes 30 77.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35320659 + NM_177435 PPARD 1 1.16 0.29 17 4.58 77.62 33 4.7 No -3 0.49 No 0 0 No -32 0.43 No 38 69.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 35320705 + NM_177435 PPARD 1 6.69 1.71 55 7.62 88.19 36 6.16 Yes 43 1.25 Yes 0 0 No -35 0.4 No 35 81.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 35324005 + NM_177435 PPARD 1 3.7 0.94 39 7.27 78.01 39 5.87 Yes 26 1.27 Yes 0 0 No -25 0.61 No 32 65.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 35351353 + NM_177435 PPARD 1 11.87 2.82 67 7.29 76.03 35 5.29 No 22 -1.31 No 0 0 No -21 0.77 Yes 49 76.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 35365274 + NM_177435 PPARD 1 0.99 0.25 15 4.24 81.39 20 4.62 No 13 0.62 No 25 0.79 Yes -25 0.6 No 45 66.76 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 35392312 + NM_177435 PPARD 1 0.42 0.15 10 6.38 78.39 25 5.29 No 38 0.29 No 0 0 No -24 0.96 Yes 46 78.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 149172881 + NM_001172698 PPARGC1B 1 0.32 0.11 7 5.79 94.33 22 4.8 No 13 0.94 Yes 0 0 No -21 0.96 Yes 49 96.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149192781 + NM_001172698 PPARGC1B 1 0.4 0.11 7 3.39 0 18 4.58 No 67 -3.58 No 0 0 No -17 0.47 No 48 46.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 149197175 + NM_001172698 PPARGC1B 1 0.7 0.24 15 5.43 72.79 32 5.04 No 34 0.68 No 23 0.75 Yes -23 0.92 Yes 47 91.3 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 149198704 + NM_001172698 PPARGC1B 1 2.61 0.83 35 5.02 79.05 29 5.58 Yes 53 0.34 No 0 0 No -28 0.76 Yes 49 62.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 149204980 + NM_001172698 PPARGC1B 1 0.26 0.11 7 8.15 84.68 28 5.48 No 15 1.66 Yes 0 0 No -27 0.87 Yes 43 94.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149227928 + NM_001172698 PPARGC1B 1 0.98 0.38 19 8.84 94.93 16 5.57 Yes 37 -1.86 No 0 0 No -18 0.8 Yes 52 70.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 57266797 - NM_002703 PPAT 1 0.17 0.28 15 7.49 99.45 23 5.1 No 24 0.62 No 0 0 No -22 0.94 Yes 48 95.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 57269930 - NM_002703 PPAT 1 0.09 0.1 7 10.52 79.76 32 6.65 Yes 19 1.4 Yes 0 0 No -31 0.67 Yes 39 81.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 57270118 - NM_002703 PPAT 1 0.26 0.4 18 7.47 83.37 22 4.93 No 13 0.48 No 0 0 No -25 0.69 Yes 45 51.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 57270285 - NM_002703 PPAT 1 0.17 0.25 16 5.89 67.37 36 5.3 No 23 0.13 No 35 0.78 Yes -35 0.76 Yes 35 85.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 57272785 - NM_002703 PPAT 1 3.25 2.64 59 -1.28 72.99 53 7.44 Yes 52 0.45 No 24 0.7 Yes -31 0.55 No 39 41.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 75341473 + NM_001301104 PPCDC 1 0.5 0.22 11 7.27 79.3 30 5.83 Yes 72 -4.83 No 21 0.72 Yes -27 0.9 Yes 43 82.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 42923122 + NM_001287510 PPCS 1 0.34 0.31 17 5.66 80.72 37 6.08 Yes 35 0.58 No 0 0 No -30 0.64 No 40 59.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62153057 + NM_024299 PPDPF 1 0.07 0.42 20 0.73 67.46 23 5.92 Yes 10 0.48 No 0 0 No -22 0.75 Yes 48 71.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62153359 + NM_024299 PPDPF 1 0.09 0.49 27 4.96 65.45 83 7.18 Yes NA NA NA 0 0 No -47 0.34 No 16 53.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 70188997 + NM_177423 PPFIA1 1 1.34 0.42 21 10.41 86.53 27 6.54 Yes 14 0.86 Yes 0 0 No -26 0.83 Yes 44 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 70196028 + NM_177423 PPFIA1 1 32.97 10.43 72 7.57 85.53 34 7.63 Yes 51 1.64 Yes 23 0.79 Yes -33 0.76 Yes 37 75.65 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 70197099 + NM_177423 PPFIA1 1 1.26 0.38 19 2.5 74.21 40 7.07 Yes 62 0.99 Yes 23 0.83 Yes -40 0.42 No 30 63.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 70211478 + NM_177423 PPFIA1 1 0.86 0.39 23 2.58 64.67 75 10.93 Yes 36 0.77 Yes 29 0.31 Yes -48 0.62 No 22 56.97 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 70213365 + NM_177423 PPFIA1 1 0.47 0.24 12 12.85 89.8 27 6.56 Yes 14 0.49 No 0 0 No -26 0.76 Yes 44 90.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 70218317 + NM_177423 PPFIA1 1 3.28 1.56 56 2.58 65.04 22 6.56 Yes 9 2.04 Yes 21 0.86 Yes -26 0.58 No 44 76.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 70220765 + NM_177423 PPFIA1 1 0.19 0.11 7 9.27 85.19 34 6.44 Yes 21 1.26 Yes 0 0 No -19 0.79 Yes 51 91.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27801270 + NM_001198915 PPFIBP1 1 0.35 0.17 12 0.38 78.96 21 4.68 No 73 0.74 No 0 0 No -30 0.54 No 40 74.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 27811748 + NM_001198915 PPFIBP1 1 0.38 0.19 12 7.64 88.81 31 8.74 Yes 18 1.84 Yes 30 0.9 Yes -30 0.78 Yes 40 93.33 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 27820459 + NM_001198915 PPFIBP1 1 0.25 0.13 8 9.49 80.22 32 5.03 No -2 1.78 Yes 0 0 No -31 0.48 No 39 51.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 27829639 + NM_001198915 PPFIBP1 1 0.77 0.25 14 8.82 90.94 20 7.18 Yes 66 1.54 Yes 0 0 No -23 0.9 Yes 47 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27832418 + NM_001198915 PPFIBP1 1 1.64 0.46 24 -6.51 77.08 55 8.15 Yes 42 0.92 Yes 27 0.88 Yes -24 0.76 Yes 46 74.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 7569574 + NM_003621 PPFIBP2 1 1.12 0.38 20 7.23 86.07 60 7.09 Yes 5 1.11 Yes 23 0.8 Yes -23 0.91 Yes 47 89.59 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 7619475 + NM_003621 PPFIBP2 1 0.14 0.11 7 -1.11 68.07 70 10.3 Yes 57 1.37 Yes 30 0.45 Yes -28 0.76 Yes 34 38.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 7620364 + NM_003621 PPFIBP2 1 0.26 0.21 14 5.13 83.78 37 5.38 No 4 0.53 No 0 0 No -20 0.6 No 50 55.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 7624898 + NM_003621 PPFIBP2 1 0.34 0.25 13 5.07 91.88 23 5.19 No 10 0.02 No 0 0 No -22 0.78 Yes 48 63.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 7660967 + NM_003621 PPFIBP2 1 0.21 0.19 12 -0.48 0 49 6.91 Yes 36 1.26 Yes 0 0 No -41 0.71 Yes 29 84.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 7672089 + NM_003621 PPFIBP2 1 1.5 0.71 34 6.47 90.47 24 3.79 No 37 2.09 Yes 23 0.97 Yes -23 0.92 Yes 47 95.03 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 42723624 + NM_016488 PPHLN1 1 0.16 0.19 10 8.8 90.16 44 6.99 Yes 52 -2.54 No 24 0.39 Yes -24 0.57 No 46 74.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 42726461 + NM_016488 PPHLN1 1 45.71 51.53 72 11.93 88.47 26 6.74 Yes 13 0.26 No 25 0.86 Yes -25 0.8 Yes 45 91.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 42729694 + NM_016488 PPHLN1 1 0.17 0.24 13 2.52 0 13 4.36 No 52 1.34 Yes 0 0 No -40 0.28 No 40 37.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 42753058 + NM_016488 PPHLN1 1 0.12 0.26 16 7.77 92.04 27 5.28 No 14 0.26 No 26 0.59 Yes -26 0.54 No 44 43.15 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 42767194 + NM_016488 PPHLN1 1 0.07 0.14 9 8.96 92.46 30 5.2 No 67 1.32 Yes 0 0 No -23 0.51 No 42 44.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 42768439 + NM_016488 PPHLN1 1 0.36 0.68 35 7.28 85.02 32 6.56 Yes 19 1.52 Yes 31 0.86 Yes -31 0.9 Yes 39 95.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 42768442 + NM_016488 PPHLN1 1 0.05 0.11 7 4.02 80.12 35 6.78 Yes 22 1.5 Yes 0 0 No -34 0.9 Yes 36 94.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 42768757 + NM_016488 PPHLN1 1 0.2 0.42 22 2.39 85.45 26 4.04 No 62 -1.8 No 25 0.93 Yes -25 0.92 Yes 45 96 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 42769138 + NM_016488 PPHLN1 1 0.13 0.44 23 12.12 95.65 27 5.57 Yes 37 1.43 Yes 0 0 No -26 0.39 No 44 51.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 42778701 + NM_016488 PPHLN1 1 0.36 1.22 51 5.38 79.3 30 6 Yes 17 1.11 Yes 26 0.75 Yes -29 0.48 No 41 68.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 42795845 + NM_016488 PPHLN1 1 0.17 0.46 23 8.31 86.16 24 5.92 Yes 11 1.21 Yes 0 0 No -23 0.84 Yes 47 92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 42821125 + NM_016488 PPHLN1 1 0.24 0.69 30 4.87 78.81 25 4.54 No 63 0.53 No 0 0 No -24 0.71 Yes 46 94.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 42836286 + NM_016488 PPHLN1 1 0.61 0.31 18 6.73 87.22 21 7.11 Yes 8 0.69 No 0 0 No -27 0.65 No 50 77.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 44837118 + NM_001300981 PPIA 1 4.93 2.92 70 5.3 82.87 21 4.29 No 37 -0.43 No 0 0 No -21 0.42 No 49 56.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44838963 + NM_001300981 PPIA 1 0 0.17 10 -3.02 0 46 7.07 Yes 33 0.9 Yes 25 0.47 Yes -22 0.41 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44838967 + NM_001300981 PPIA 1 0.01 0.33 20 -0.87 0 50 7.35 Yes 37 0.9 Yes 25 0.47 Yes -24 0.39 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 44839732 + NM_001300981 PPIA 1 0 0.22 13 6.46 87.81 26 5.1 No 63 0.01 No 0 0 No -25 0.85 Yes 45 76.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44840022 + NM_001300981 PPIA 1 0.14 9.44 71 10.47 93.46 31 5.68 Yes 18 0.88 Yes 30 0.85 Yes -30 0.56 No 40 72.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr7 44840858 + NM_001300981 PPIA 1 0 0.31 12 5.16 80.3 19 5.57 Yes 20 0.38 No 25 0.92 Yes -28 0.5 No 42 62.27 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 64448342 - NM_000942 PPIB 1 0.05 1.08 44 -5.45 84.35 42 7.93 Yes 29 1.38 Yes 0 0 No -20 0.58 No 33 71.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 64452337 - NM_000942 PPIB 1 0.01 0.17 10 2.73 83.05 22 4.82 No 70 1.4 Yes 0 0 No -21 0.88 Yes 49 82.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64452393 - NM_000942 PPIB 1 0.04 0.85 36 2.74 0 27 8.81 Yes 14 1.46 Yes 0 0 No -26 0.89 Yes 44 94.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64452396 - NM_000942 PPIB 1 0.02 0.49 28 -10.85 0 24 8.65 Yes 11 1.47 Yes 0 0 No -23 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 159636821 - NM_005038 PPID 1 1.68 3.25 65 7.02 79.92 21 5 No 8 -1.8 No 21 0.65 Yes -20 0.64 No 50 77.71 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 40211085 + NM_001195007 PPIE 1 7.75 13.39 72 4.77 78.4 24 5.2 No 51 1.28 Yes 23 0.91 Yes -23 0.85 Yes 47 69.03 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 40214378 + NM_001195007 PPIE 1 0.1 0.13 7 5.54 80.22 23 4.3 No 67 -4.89 No 0 0 No -22 0.74 Yes 48 78.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 81112024 + NM_005729 PPIF 1 0.13 0.57 29 7.13 80.19 15 7.95 Yes 2 -0.2 No 0 0 No -29 0.75 Yes 41 91.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 81113400 + NM_005729 PPIF 1 2.04 8.67 71 4.69 77.1 37 4.87 No 5 0.22 No 18 0.25 Yes -36 0.34 No 57 34.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 170449160 + NM_004792 PPIG 1 1.09 1 44 2.88 80.29 31 5.74 Yes 18 0.75 No 0 0 No -30 0.92 Yes 40 94.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 170470911 + NM_004792 PPIG 1 0.16 0.46 24 10.07 87.82 20 5.33 No 42 1.15 Yes 0 0 No -28 0.53 No 43 58.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 170479465 + NM_004792 PPIG 1 0.11 0.26 14 3.63 71.31 29 6.26 Yes 66 0.92 Yes 0 0 No -28 0.89 Yes 42 95.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 170481283 + NM_004792 PPIG 1 0.06 0.13 9 6.67 85.02 21 7.21 Yes 8 1.32 Yes 0 0 No -20 0.87 Yes 50 91.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 170487341 + NM_004792 PPIG 1 0.06 0.15 10 8.24 76.31 28 4.77 No 19 0.61 No 24 0.89 Yes -27 0.61 No 46 56.34 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 170488108 + NM_004792 PPIG 1 0.51 1.14 44 3.92 72.35 40 7.03 Yes 27 0.74 No 39 0.45 Yes -39 0.65 No 31 79.32 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 170488284 + NM_004792 PPIG 1 1.7 3.96 69 -1.72 0 12 4.13 No 26 1.55 Yes 29 0.77 Yes -39 0.31 No 26 68.27 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 43124518 + NM_001330510 PPIH 1 0.28 0.68 34 -5.36 0 26 7.87 Yes 13 1.88 Yes 0 0 No -25 0.89 Yes 45 88.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43124902 + NM_001330510 PPIH 1 0.05 0.15 9 3.85 0 35 5.89 Yes 18 0.87 Yes 30 0.81 Yes -34 0.8 Yes 36 79.13 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 43129088 + NM_001330510 PPIH 1 0.28 0.76 34 9.01 88.27 26 5.02 No 47 1.01 Yes 0 0 No -25 0.86 Yes 45 88.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43133034 + NM_001330510 PPIH 1 0.08 0.22 14 6.79 82.64 16 4.69 No 35 0.1 No 0 0 No -32 0.58 No 38 88.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 43133717 + NM_001330510 PPIH 1 1.02 1.75 59 7.14 94.01 19 4.8 No 75 0.76 No 0 0 No -18 0.86 Yes 52 65.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 43140518 + NM_001330510 PPIH 1 0.11 0.18 12 4.05 70.14 31 8.25 Yes 18 0.72 No 0 0 No -30 0.72 Yes 40 92.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43140958 + NM_001330510 PPIH 1 2.58 4.58 69 3.78 78.21 18 5.29 No 56 0.23 No 21 0.66 Yes -21 0.86 Yes 49 71.13 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 43141037 + NM_001330510 PPIH 1 1.88 3.29 66 12.11 90.48 23 6.91 Yes 10 1.88 Yes 0 0 No -22 0.64 No 48 85.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 43141403 + NM_001330510 PPIH 1 3.57 6.24 71 5.67 78.11 16 6.24 Yes 3 1.12 Yes 0 0 No -29 0.69 Yes 55 80.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43141408 + NM_001330510 PPIH 1 0.49 0.76 35 2.78 0 21 6.63 Yes 8 1.11 Yes 0 0 No -20 0.71 Yes 50 92.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 22024587 + NM_014337 PPIL2 1 0.36 0.43 23 1.81 75.46 14 4.47 No -2 0.52 No 22 0.64 Yes -22 0.41 No 47 29.02 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 22025287 + NM_014337 PPIL2 1 0.1 0.13 7 -20.3 0 28 3.98 No 5 1.55 Yes 0 0 No -27 0.94 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 22025298 + NM_014337 PPIL2 1 0.15 0.19 12 10.39 87.47 16 4.69 No 16 1.63 Yes 0 0 No -28 0.66 No 32 82.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 22029355 + NM_014337 PPIL2 1 0.38 0.26 17 2.21 74.49 20 6.32 Yes 57 1.83 Yes 0 0 No -26 0.69 Yes 44 59.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 22030341 + NM_014337 PPIL2 1 0.24 0.22 13 5.91 83.6 38 6.53 Yes 25 -0.44 No 0 0 No -20 0.89 Yes 50 91.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 22039926 + NM_014337 PPIL2 1 1.49 1.5 49 8.41 85.66 33 6.72 Yes 20 0.58 No 32 0.76 Yes -28 0.74 Yes 42 81.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr22 22045673 + NM_014337 PPIL2 1 0.52 0.38 20 2.93 76.77 40 6.63 Yes 4 0.69 No 0 0 No -37 0.78 Yes 33 92.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 22049046 + NM_014337 PPIL2 1 0.09 0.1 7 -8.8 77.98 22 5.29 No 9 1.37 Yes 0 0 No -21 0.67 Yes 49 57.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 22049686 + NM_014337 PPIL2 1 5.31 4 70 -0.26 0 26 5.66 Yes 43 -2.7 No 21 0.73 Yes -25 0.61 No 45 74.14 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 201736237 - NM_130906 PPIL3 1 0.29 0.42 22 -1.09 0 11 4.12 No 60 -2.06 No 0 0 No -33 0.82 Yes 37 88.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 201742328 - NM_130906 PPIL3 1 1.15 1.46 53 9.77 89.13 20 4.31 No 16 0.57 No 24 0.58 Yes -24 0.75 Yes 47 70.66 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 201746024 - NM_130906 PPIL3 1 1.34 1.89 51 4.84 80.6 34 5.99 Yes 5 0.21 No 0 0 No -23 0.49 No 42 48.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 201747106 - NM_130906 PPIL3 1 0.78 0.47 25 7.54 82.52 29 6.13 Yes 62 0.95 Yes 28 0.62 Yes -20 0.66 Yes 48 51.26 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr2 201750067 - NM_130906 PPIL3 1 1.12 0.75 34 6.91 85.7 27 5.2 No 61 0.86 Yes 26 0.84 Yes -47 0.47 No 23 62.83 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 201750091 - NM_130906 PPIL3 1 32.35 20.03 72 2.02 83.78 50 4.72 No 75 1.01 Yes 23 0.73 Yes -23 0.63 No 47 54.13 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 201752407 - NM_130906 PPIL3 1 3.22 2.38 59 -3.86 72.18 27 6.21 Yes 14 1.6 Yes 0 0 No -26 0.5 No 44 81.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 149833416 - NM_139126 PPIL4 1 0.56 0.56 29 3.99 70.48 31 3.88 No 61 0.8 Yes 0 0 No -25 0.62 No 37 26.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 149833416 - NM_139126 PPIL4 1 0.22 0.21 14 3.99 70.48 31 3.88 No 61 0.8 Yes 0 0 No -25 0.62 No 37 26.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 149838221 - NM_139126 PPIL4 1 0.77 0.76 38 10.47 86.38 30 6.45 Yes 17 1.44 Yes 0 0 No -29 0.78 Yes 41 87.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 149841525 - NM_139126 PPIL4 1 0.55 0.42 23 10.47 84.37 22 5.32 No 56 0.42 No 0 0 No -22 0.74 Yes 48 74.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 149852493 - NM_139126 PPIL4 1 0.63 0.72 32 3.36 0 31 7.94 Yes 18 1.57 Yes 0 0 No -30 0.94 Yes 40 95.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 149852738 - NM_139126 PPIL4 1 0.45 0.54 26 8.83 90.27 33 5.51 No 20 0.91 Yes 0 0 No -32 0.91 Yes 38 86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 149856859 - NM_139126 PPIL4 1 0.2 0.18 12 6.25 91.7 21 5 No 66 0.1 No 0 0 No -37 0.53 No 33 40.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 149859863 - NM_139126 PPIL4 1 0.41 0.33 21 8.92 88.53 19 6.24 Yes 6 1.52 Yes 0 0 No -25 0.49 No 45 54.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43828453 - NM_014659 PPIP5K1 1 0.62 0.15 10 3.6 85.02 17 6.63 Yes 62 1.24 Yes 27 0.28 Yes -27 0.64 No 43 61.62 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 43856364 - NM_014659 PPIP5K1 1 23.48 3.39 69 10.75 91.46 27 4.93 No 5 1.13 Yes 26 0.72 Yes -27 0.65 No 44 77.48 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr15 43865359 - NM_014659 PPIP5K1 1 1.65 0.57 29 0.15 0 11 4.12 No 6 0.36 No 18 0.87 Yes -18 0.81 Yes 48 54.79 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr15 43868036 - NM_014659 PPIP5K1 1 0.41 0.1 7 8.17 85.75 31 5.73 Yes 23 0.95 Yes 0 0 No -23 0.54 No 47 60.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43873628 - NM_014659 PPIP5K1 1 6.63 1.26 49 8.3 91.58 22 5.92 Yes 34 1.04 Yes 21 0.9 Yes -21 0.91 Yes 49 94.46 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 43876705 - NM_014659 PPIP5K1 1 1.03 0.1 7 4.57 79.27 18 4.9 No 35 1.04 Yes 22 0.69 Yes -20 0.3 No 23 65.87 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr15 43876820 - NM_014659 PPIP5K1 1 2.38 0.22 13 10.43 80.56 28 5.66 Yes 27 1.2 Yes 27 0.68 Yes -25 0.69 Yes 45 90.36 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 102471696 + NM_001281471 PPIP5K2 1 0.13 0.14 9 4.74 84.41 35 4.35 No 63 0.85 Yes 27 0.66 Yes -27 0.87 Yes 43 94.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 102467519 + NM_001281471 PPIP5K2 1 0.31 0.4 23 7.53 79.54 25 5.34 No 63 0.47 No 0 0 No -24 0.43 No 35 61.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 102471696 + NM_001281471 PPIP5K2 1 0.78 0.89 39 4.74 84.41 35 4.35 No 63 0.85 Yes 27 0.66 Yes -27 0.87 Yes 43 94.17 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 102483855 + NM_001281471 PPIP5K2 1 0.25 0.28 16 9.06 87.75 34 7.14 Yes 21 2.01 Yes 33 0.75 Yes -33 0.78 Yes 37 93.2 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 102484846 + NM_001281471 PPIP5K2 1 0.14 0.14 9 -2.63 0 81 9.53 Yes 68 0.69 No 26 0.74 Yes -17 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr5 102494158 + NM_001281471 PPIP5K2 1 10.87 11.15 72 -12.23 80.5 24 4.99 No 58 -4.45 No 0 0 No -23 0.82 Yes 47 87.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 102501208 + NM_001281471 PPIP5K2 1 0.09 0.14 9 6.52 76.71 58 8.3 Yes 28 0.3 No 0 0 No -35 0.51 No 30 49.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 102513376 + NM_001281471 PPIP5K2 1 2.25 0.24 16 -5.51 0 12 4.24 No 19 0.15 No 0 0 No -31 0.53 No 39 57.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 102531005 + NM_001281471 PPIP5K2 1 0.34 0.44 22 0.24 76.76 36 7.81 Yes 41 0.85 Yes 0 0 No -35 0.73 Yes 35 75.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 102531011 + NM_001281471 PPIP5K2 1 0.1 0.11 7 1.18 0 9 3.87 No 47 0.83 Yes 0 0 No -41 0.78 Yes 29 79.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 102531039 + NM_001281471 PPIP5K2 1 0.16 0.22 12 5.55 71.67 19 5.18 No 75 0.82 Yes 0 0 No -18 0.76 Yes 52 81.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 60717097 + NM_021003 PPM1A 1 20.91 9.69 71 9.09 84.38 26 5.66 Yes 66 0.37 No 25 0.85 Yes -25 0.84 Yes 45 88.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 60723541 + NM_021003 PPM1A 1 1.31 0.57 26 7.97 84.52 35 4.67 No 11 1.16 Yes 0 0 No -23 0.87 Yes 47 92.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 60725681 + NM_021003 PPM1A 1 1.04 0.47 21 4.42 87.43 22 4.8 No 9 0.09 No 0 0 No -21 0.84 Yes 49 90.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 60733255 + NM_021003 PPM1A 1 0.57 0.28 14 8.14 83.12 23 6.49 Yes 32 0.49 No 0 0 No -30 0.6 No 40 69.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 60733932 + NM_021003 PPM1A 1 3.23 1.49 50 -0.35 0 9 3.87 No 19 1.54 Yes 31 0.42 Yes -31 0.43 No 30 60.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 60735010 + NM_021003 PPM1A 1 4.69 2.08 55 10.13 90.21 21 5.72 Yes 8 1.17 Yes 23 0.75 Yes -24 0.73 Yes 46 80.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 60743722 + NM_021003 PPM1A 1 13.92 6.32 71 5.08 82.65 25 5.19 No 12 0.62 No 24 0.87 Yes -24 0.92 Yes 46 96.32 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 60744030 + NM_021003 PPM1A 1 3.04 1.39 52 5.03 77.05 23 5.09 No 7 0.1 No 22 0.8 Yes -22 0.46 No 43 49.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 60745290 + NM_021003 PPM1A 1 0.64 0.31 13 9.95 90.55 30 5.92 Yes 17 1.29 Yes 0 0 No -29 0.75 Yes 41 69.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 60758117 + NM_021003 PPM1A 1 0.6 1.53 55 -10.18 76.55 29 6.07 Yes 43 0.87 Yes 0 0 No -28 0.88 Yes 42 88.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 60758249 + NM_021003 PPM1A 1 1 2.22 66 9.86 88.74 31 8.35 Yes 18 1.09 Yes 0 0 No -30 0.65 No 40 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 60758335 + NM_021003 PPM1A 1 0.06 0.14 9 5.1 75.69 49 7.09 Yes 7 1.52 Yes 0 0 No -35 0.52 No 35 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 44421336 + NM_177968 PPM1B 1 0.13 0.1 7 9.67 89.73 57 9.42 Yes 44 1.61 Yes 0 0 No -33 0.79 Yes 37 86.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44434735 + NM_177968 PPM1B 1 0.08 0.11 7 -4.08 84.41 23 6.24 Yes 10 0.26 No 0 0 No -27 0.41 No 45 53.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 44440834 + NM_177968 PPM1B 1 0.88 1.32 47 8.43 83.11 14 4.66 No 6 0.86 Yes 25 0.87 Yes -25 0.82 Yes 45 93.86 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 44445081 + NM_177968 PPM1B 1 0.87 1.33 55 6.06 73.44 16 4.66 No 68 0.26 No 30 0.66 Yes -26 0.35 No 55 47.49 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 44450155 + NM_177968 PPM1B 1 0.19 0.15 9 8.66 90.51 21 6.63 Yes 8 1.25 Yes 0 0 No -20 0.81 Yes 50 87.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44454578 + NM_177968 PPM1B 1 0.13 0.11 8 11.83 97.1 31 5.96 Yes 56 -1.22 No 0 0 No -25 0.47 No 40 56.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 44457551 + NM_177968 PPM1B 1 81.31 60.31 72 1.76 62.3 29 6.71 Yes 50 -1.78 No 28 0.91 Yes -28 0.87 Yes 42 82.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 44457628 + NM_177968 PPM1B 1 0.12 0.1 7 -2.24 0 15 4.58 No 73 -6.1 No 0 0 No -19 0.62 No 47 34.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 58686475 + NM_003620 PPM1D 1 0.22 0.22 13 6.86 83.68 46 6.78 Yes 37 0.83 Yes 0 0 No -34 0.5 No 34 71.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 58701831 + NM_003620 PPM1D 1 1.03 1.07 43 7.77 90.95 56 8.16 Yes 60 1.22 Yes 0 0 No -22 0.73 Yes 48 67.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 58734292 + NM_003620 PPM1D 1 1.01 1.64 52 8.22 90.39 30 6.46 Yes 44 0.09 No 29 0.86 Yes -29 0.68 Yes 41 64.08 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 58737000 + NM_003620 PPM1D 1 0.17 0.22 13 5.68 83.03 23 5.02 No 10 0.53 No 0 0 No -26 0.67 Yes 44 76.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 22279402 - NM_014634 PPM1F 1 4.54 0.74 35 3.46 80.25 18 4.9 No 62 1.01 Yes 21 0.71 Yes -17 0.69 Yes 53 73.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 22294049 - NM_014634 PPM1F 1 1.26 0.32 17 -0.53 0 27 8 Yes 14 1.69 Yes 0 0 No -26 0.96 Yes 44 94.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27604589 - NM_177983 PPM1G 1 2.18 7.47 71 1.9 78.8 25 5.2 No 12 0.7 No 0 0 No -32 0.38 No 38 62.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27604627 - NM_177983 PPM1G 1 0.04 0.14 9 0.57 69.96 24 5.48 No 57 1.3 Yes 0 0 No -21 0.31 No 44 40.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 27606576 - NM_177983 PPM1G 1 0.03 0.13 8 6.73 76.97 29 6.32 Yes 63 -1.66 No 0 0 No -27 0.61 No 43 40.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 89186248 - NM_152542 PPM1K 1 0.16 0.18 12 9.41 78.82 28 4.6 No 15 1.21 Yes 0 0 No -27 0.74 Yes 43 93.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 89186308 - NM_152542 PPM1K 1 0.4 0.56 27 -0.04 76.31 11 4.65 No 71 -5.19 No 24 0.64 Yes -26 0.58 No 44 49.47 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 89189123 - NM_152542 PPM1K 1 0.12 0.14 8 13.65 84.38 42 6.22 Yes 33 1.08 Yes 0 0 No -24 0.24 No 46 44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 89192342 - NM_152542 PPM1K 1 0.13 0.14 9 5.44 82.49 39 7.84 Yes 26 0.29 No 30 0.28 Yes -30 0.42 No 40 60.18 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 89192411 - NM_152542 PPM1K 1 1.95 2.17 61 10.95 87.98 39 6.16 Yes 50 0.14 No 0 0 No -31 0.77 Yes 39 80.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 89192440 - NM_152542 PPM1K 1 1.38 1.63 54 11.77 87.3 25 6.52 Yes 21 0.12 No 0 0 No -33 0.69 Yes 37 51.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 89195607 - NM_152542 PPM1K 1 1.05 1.22 45 5.1 85.77 35 5.34 No 60 1.88 Yes 0 0 No -20 0.9 Yes 50 86.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 89195638 - NM_152542 PPM1K 1 0.15 0.15 9 -3.1 0 9 3.87 No 29 1.89 Yes 0 0 No -41 0.79 Yes 29 73.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 89195644 - NM_152542 PPM1K 1 0.41 0.47 23 0.3 75.97 36 7 Yes 23 1.91 Yes 0 0 No -35 0.83 Yes 35 82.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 89195684 - NM_152542 PPM1K 1 2.73 3.01 61 11.19 83.99 17 5.74 Yes 33 0.85 Yes 0 0 No -26 0.75 Yes 44 83.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 89197033 - NM_152542 PPM1K 1 0.18 0.18 11 2.9 76.68 76 7.3 Yes -3 0.5 No 0 0 No -21 0.72 Yes 20 69.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 89197930 - NM_152542 PPM1K 1 1.49 1.61 52 10.13 87.11 34 6.32 Yes 61 0.76 No 0 0 No -36 0.74 Yes 34 86.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52280989 + NM_001122870 PPM1M 1 559.82 28.82 72 6.49 83.63 23 4.76 No 10 1.44 Yes 22 0.96 Yes -22 0.83 Yes 48 93.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 52282336 + NM_001122870 PPM1M 1 0.93 0.26 12 -4.44 0 25 4.94 No 41 0.39 No 21 0.95 Yes -12 0.49 No 54 27.25 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 52283213 + NM_001122870 PPM1M 1 0.68 0.31 14 1.98 62.92 33 5.23 No 66 -4.79 No 0 0 No -21 0.66 No 49 71.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52283285 + NM_001122870 PPM1M 1 0.35 0.15 11 2.93 74.94 33 7.98 Yes 41 -2.98 No 0 0 No -32 0.81 Yes 38 62.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52283660 + NM_001122870 PPM1M 1 3.77 1.47 50 4.7 73.26 36 6.48 Yes 23 0.52 No 35 0.66 Yes -35 0.62 No 35 80.04 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 52283671 + NM_001122870 PPM1M 1 0.42 0.15 10 5.05 0 15 4.47 No 2 0.95 Yes 22 0.74 Yes -46 0.56 No 24 73.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 73915399 + NM_016147 PPME1 1 0.47 0.31 18 -3.44 0 37 5.89 Yes 74 -3.46 No 0 0 No -13 0.48 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 73916511 + NM_016147 PPME1 1 0.48 0.28 16 7.01 76.55 32 5.81 Yes 30 0.96 Yes 0 0 No -31 0.55 No 51 54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 73916821 + NM_016147 PPME1 1 0.16 0.11 8 11.53 87.79 44 7.89 Yes 35 0.89 Yes 43 0.33 Yes -20 0.5 No 43 60.21 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 73920176 + NM_016147 PPME1 1 0.24 0.13 8 8.2 94.04 49 6.93 Yes 36 0.82 Yes 0 0 No -33 0.48 No 37 62.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 73940922 + NM_016147 PPME1 1 0.14 0.11 7 10.77 86.52 26 5.55 No 10 0.46 No 0 0 No -26 0.78 Yes 44 80.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73941962 + NM_016147 PPME1 1 0.2 0.15 9 -1.62 0 15 3.87 No 16 0.13 No 0 0 No -14 0.61 No 42 68.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 73954073 + NM_016147 PPME1 1 0.44 0.43 22 5.39 74.09 35 5.92 Yes 22 1.1 Yes 0 0 No -34 0.71 Yes 36 77.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73957078 + NM_016147 PPME1 1 0.95 0.93 38 8.99 93.53 16 5.47 No 3 0.76 No 23 0.53 Yes -23 0.67 Yes 47 76.43 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 161137128 + NM_001122764 PPOX 1 1.93 0.29 17 3.27 0 15 4.58 No 28 -2.9 No 28 0.14 Yes -40 0.31 No 42 25.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 161137144 + NM_001122764 PPOX 1 0.81 0.14 10 -4.81 80.42 19 5 No 6 0.31 No 18 0.68 Yes -23 0.83 Yes 52 78.84 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 161137157 + NM_001122764 PPOX 1 1.11 0.15 10 -9.91 49.41 16 4.69 No 19 0.25 No 18 0.68 Yes -36 0.72 Yes 39 76.69 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 161137681 + NM_001122764 PPOX 1 0.54 0.13 7 6.49 82.04 33 6.67 Yes 1 0.42 No 0 0 No -32 0.46 No 38 70.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 161138202 + NM_001122764 PPOX 1 2.38 0.33 18 7.16 79.51 28 5.38 No 49 1.12 Yes 27 0.85 Yes -27 0.75 Yes 50 57 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 161138202 + NM_001122764 PPOX 1 9.37 1.19 51 7.16 79.51 28 5.38 No 49 1.12 Yes 27 0.85 Yes -27 0.75 Yes 50 57 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 161138234 + NM_001122764 PPOX 1 3.63 0.56 31 1.6 65.59 23 4.58 No 22 0.22 No 0 0 No -22 0.8 Yes 48 82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 67166516 - NM_206873 PPP1CA 1 0.01 0.1 7 -4.94 0 15 4.24 No 41 1.51 Yes 0 0 No -14 0.42 No 17 39.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67166525 - NM_206873 PPP1CA 1 0.19 1.58 52 3.69 66.67 45 6.85 Yes 32 1.52 Yes 0 0 No -26 0.88 Yes 44 69.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67168666 - NM_206873 PPP1CA 1 2.49 0.54 24 3.11 0 25 6.32 Yes 12 1.8 Yes 0 0 No -24 0.89 Yes 46 88.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67168671 - NM_206873 PPP1CA 1 2804.32 555.68 72 4.26 76.96 20 5.92 Yes 7 1.83 Yes 19 0.88 Yes -19 0.87 Yes 51 91.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 67168704 - NM_206873 PPP1CA 1 19.03 3.83 70 8.65 88.15 17 6.48 Yes NA NA NA 29 0.63 Yes -29 0.41 No 50 43.24 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 28980936 + NM_002709 PPP1CB 1 0.04 0.13 9 2.35 0 24 7.18 Yes 25 0.76 No 0 0 No -27 0.53 No 33 52.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 28982507 + NM_002709 PPP1CB 1 0.15 0.63 33 3.19 0 30 7.16 Yes 17 0.84 Yes 0 0 No -29 0.84 Yes 41 88.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 29001216 + NM_002709 PPP1CB 1 0.11 0.54 27 4.75 83.9 31 6.29 Yes 18 0.72 No 26 0.84 Yes -26 0.54 No 40 59.03 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 29001758 + NM_002709 PPP1CB 1 0.07 0.35 19 5.7 85.81 16 5.16 No 40 0.56 No 0 0 No -26 0.48 No 44 68.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 29002974 + NM_002709 PPP1CB 1 0.02 0.14 10 3.97 84.41 66 8.19 Yes 56 1.46 Yes 0 0 No -60 0.6 No 10 28.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 29005620 + NM_002709 PPP1CB 1 0.02 0.14 8 5.22 87.76 23 5.6 Yes 10 0.97 Yes 0 0 No -22 0.5 No 48 55.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 29006745 + NM_002709 PPP1CB 1 0.02 0.15 11 -3.33 0 10 4 No 20 0.62 No 0 0 No -32 0.44 No 38 71.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 29010419 + NM_002709 PPP1CB 1 0.04 0.17 9 5.5 77.99 40 6.86 Yes 19 0.73 No 0 0 No -31 0.82 Yes 39 81.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 29016786 + NM_002709 PPP1CB 1 0.03 0.19 10 3.65 80.96 14 4.52 No 1 1.97 Yes 0 0 No -27 0.49 No 43 63.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 29022066 + NM_002709 PPP1CB 1 0.07 0.42 23 -13.4 0 31 6.89 Yes 51 0.91 Yes 0 0 No -30 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 111160500 - NM_001244974 PPP1CC 1 0.02 0.13 8 -5.25 0 45 5.27 No 32 0.56 No 0 0 No -27 0.84 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 111161878 - NM_001244974 PPP1CC 1 0.02 0.15 10 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -30 0.43 No 53 78.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 111172792 - NM_001244974 PPP1CC 1 0.19 1.04 46 2.76 83.92 38 8.24 Yes 25 1.24 Yes 37 0.56 Yes -30 0.83 Yes 40 82.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 111173841 - NM_001244974 PPP1CC 1 0.12 0.76 30 9.57 94.43 16 4.08 No 3 0.35 No 0 0 No -27 0.63 No 43 52.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 111178726 - NM_001244974 PPP1CC 1 0.04 0.28 17 9.38 93.92 44 8.02 Yes 16 0.43 No 0 0 No -28 0.73 Yes 42 77.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 111179187 - NM_001244974 PPP1CC 1 0.02 0.13 7 7.76 85.46 24 5.57 Yes 11 0.32 No 0 0 No -23 0.88 Yes 47 84.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 80173132 - NM_001143886 PPP1R12A 1 0.07 0.14 9 3.57 80.36 26 6.07 Yes 13 0.05 No 25 0.72 Yes -25 0.44 No 45 57.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 80176376 - NM_001143886 PPP1R12A 1 0.17 0.31 18 5.81 81.04 74 7.94 Yes 61 1.11 Yes 26 0.82 Yes -26 0.85 Yes 44 39.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 80180639 - NM_001143886 PPP1R12A 1 0.31 0.58 31 -3.9 61.08 40 6.4 Yes 5 0.6 No 0 0 No -34 0.45 No 36 73.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 80180699 - NM_001143886 PPP1R12A 1 0.08 0.17 11 2.1 66.75 26 6.48 Yes 46 -2.56 No 29 0.7 Yes -25 0.89 Yes 45 77.33 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 80183461 - NM_001143886 PPP1R12A 1 0.51 0.74 26 5.93 78.05 44 6.75 Yes 25 0.99 Yes 37 0.7 Yes -37 0.59 No 33 66.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 80199445 - NM_001143886 PPP1R12A 1 0.27 0.11 7 3.12 73.81 38 6.93 Yes 25 1.64 Yes 0 0 No -37 0.47 No 33 84.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 80200003 - NM_001143886 PPP1R12A 1 0.09 0.14 8 -0.62 0 20 4.58 No 73 -2.83 No 0 0 No -19 0.93 Yes 51 83.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 80200043 - NM_001143886 PPP1R12A 1 0.1 0.17 9 0.72 66.49 23 4 No 73 0.93 Yes 0 0 No -23 0.54 No 47 45.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 80200078 - NM_001143886 PPP1R12A 1 10.16 15.42 72 -4.64 60.41 16 4.65 No 38 0.94 Yes 21 0.64 Yes -59 0.33 No 20 55.91 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 80214961 - NM_001143886 PPP1R12A 1 0.07 0.17 9 4.06 0 26 5.43 No 65 0.61 No 28 0.89 Yes -26 0.67 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 80221386 - NM_001143886 PPP1R12A 1 0.09 0.18 11 10.21 80.26 32 5.82 Yes 19 0.79 Yes 0 0 No -31 0.71 Yes 39 66.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 202387616 + NM_002481 PPP1R12B 1 1.47 0.1 7 9.59 93.23 28 5.65 Yes 9 0.73 No 0 0 No -27 0.5 No 43 69.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 202394456 + NM_002481 PPP1R12B 1 4.42 0.42 22 6.15 60.49 42 8.42 Yes 29 1.16 Yes 0 0 No -53 0.46 No 29 61.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 202422661 + NM_002481 PPP1R12B 1 2.05 0.18 13 8.63 87.56 13 5.23 No 0 0.9 Yes 0 0 No -28 0.47 No 46 58.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 55603061 - NM_001271618 PPP1R12C 1 0.11 0.14 9 -5.16 0 16 4.12 No 29 1.79 Yes 0 0 No -41 0.72 Yes 29 83.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55603685 - NM_001271618 PPP1R12C 1 0.2 0.22 14 0.65 0 19 4.36 No 21 2.03 Yes 0 0 No -33 0.62 No 37 80.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 55604237 - NM_001271618 PPP1R12C 1 60.51 31.88 72 5.81 79.5 20 6.32 Yes 7 1.46 Yes 19 0.77 Yes -19 0.8 Yes 51 90.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 55606113 - NM_001271618 PPP1R12C 1 0.67 0.61 31 9.12 89.41 16 4.46 No 71 1.09 Yes 0 0 No -44 0.51 No 26 35.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 55606972 - NM_001271618 PPP1R12C 1 149.09 52.19 72 5.97 83.5 25 5.11 No 12 1.81 Yes 24 0.97 Yes -24 0.74 Yes 46 88.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 55610221 - NM_001271618 PPP1R12C 1 0.29 0.39 20 -3.33 0 13 3.87 No 17 1.59 Yes 0 0 No -29 0.6 No 41 85.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 55615528 - NM_001271618 PPP1R12C 1 1.12 0.64 28 10.86 88.27 83 10.78 Yes 60 -0.78 No 0 0 No -24 0.22 No 46 45.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 55617303 - NM_001271618 PPP1R12C 1 0.18 0.11 7 3.56 0 25 5.88 Yes 12 1.26 Yes 0 0 No -24 0.66 No 46 88.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 55617307 - NM_001271618 PPP1R12C 1 0.27 0.19 11 8.01 85.05 21 5.53 No 8 1.29 Yes 0 0 No -27 0.75 Yes 50 85.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55621119 - NM_001271618 PPP1R12C 1 0.72 0.46 27 9.67 87.29 31 5.83 Yes 69 -1.81 No 0 0 No -30 0.77 Yes 39 68.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104203735 - NM_015316 PPP1R13B 1 4.15 0.38 20 9.97 88.27 31 6.48 Yes 18 1.41 Yes 0 0 No -30 0.93 Yes 40 95.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104218657 - NM_015316 PPP1R13B 1 1.91 0.35 20 11.13 84.03 26 5.06 No 50 0.36 No 0 0 No -23 0.47 No 45 63.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104230817 - NM_015316 PPP1R13B 1 8.4 0.93 41 5.74 81.14 30 7.01 Yes 17 0.59 No 25 0.6 Yes -29 0.41 No 41 40.84 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 104261001 - NM_015316 PPP1R13B 1 1.9 0.26 13 8.25 92.63 23 5 No 47 1.33 Yes 0 0 No -22 0.89 Yes 48 96.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64012527 - NM_138689 PPP1R14B 1 0.03 0.24 14 7.37 86.67 30 6 Yes 64 0.87 Yes 0 0 No -29 0.68 Yes 41 65.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 49376486 + NM_014330 PPP1R15A 1 0.1 0.13 8 3.49 0 35 7.27 Yes 22 1.87 Yes 0 0 No -34 0.67 Yes 36 84.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 204377453 - NM_032833 PPP1R15B 1 0.89 1.71 60 10.81 86.3 38 6.24 Yes 15 0.71 No 0 0 No -27 0.52 No 33 58.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145723378 + NM_001329444 PPP1R16A 1 0.96 0.24 12 8.61 78.72 36 7.47 Yes 23 1.72 Yes 0 0 No -35 0.74 Yes 35 86.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145724322 + NM_001329444 PPP1R16A 1 0.87 0.19 12 -4.34 67.97 15 5.7 Yes 30 -1.01 No 0 0 No -26 0.87 Yes 44 61.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 145726515 + NM_001329444 PPP1R16A 1 1.43 0.15 11 2.25 0 30 8.72 Yes 17 2.04 Yes 0 0 No -29 0.94 Yes 41 95.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37439153 + NM_015568 PPP1R16B 1 0.22 0.15 9 8.75 90.48 29 8.19 Yes 16 1.5 Yes 0 0 No -28 0.95 Yes 42 91.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37454242 + NM_015568 PPP1R16B 1 0.33 0.25 14 10.85 84.23 23 5.27 No 21 -1.27 No 0 0 No -21 0.77 Yes 49 81.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 37457985 + NM_015568 PPP1R16B 1 0.28 0.25 14 9.35 86.83 22 7.6 Yes 9 1.23 Yes 0 0 No -21 0.36 No 49 71.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 37524008 + NM_015568 PPP1R16B 1 0.08 0.18 12 4.28 85.29 65 7.85 Yes 52 1.28 Yes 0 0 No -31 0.7 Yes 39 89.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37535627 + NM_015568 PPP1R16B 1 0.07 0.14 8 3.89 0 9 3.87 No 76 0.16 No 0 0 No -29 0.64 No 41 69.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 37536430 + NM_015568 PPP1R16B 1 0.35 0.92 42 5.15 75.73 30 5.83 Yes 65 -0.87 No 23 0.68 Yes -29 0.42 No 41 40.9 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 37536674 + NM_015568 PPP1R16B 1 1.63 4.42 71 0.77 0 20 5.74 Yes NA NA NA 0 0 No -26 0.57 No 47 46.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 37540204 + NM_015568 PPP1R16B 1 0.05 0.15 8 0.35 0 43 8.54 Yes 36 0.28 No 0 0 No -42 0.79 Yes 28 86.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 37546807 + NM_015568 PPP1R16B 1 0.05 0.15 9 -3.16 0 17 4.12 No 18 1.36 Yes 0 0 No -30 0.61 No 40 61.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 195245982 - NM_001291505 PPP1R2 1 0.05 0.1 7 -13.65 0 25 5.34 No 12 0.88 Yes 0 0 No -28 0.54 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48675596 + NM_001193475 PPP1R21 1 0.39 0.25 16 9.24 95.5 53 6.81 Yes 12 0.03 No 0 0 No -24 0.84 Yes 46 85.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48681694 + NM_001193475 PPP1R21 1 29.52 14.5 72 5.85 81.25 30 4.67 No -2 0.44 No 22 0.65 Yes -29 0.58 No 48 44.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 48686855 + NM_001193475 PPP1R21 1 3.16 2.32 64 7.64 79.27 34 5.34 No 21 0.88 Yes 28 0.57 Yes -33 0.91 Yes 37 89.51 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 48689334 + NM_001193475 PPP1R21 1 4.15 4.04 69 8.29 80.75 25 5.08 No 12 1.18 Yes 0 0 No -24 0.87 Yes 46 91.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48701826 + NM_001193475 PPP1R21 1 0.42 0.33 16 2.75 0 56 6.09 Yes 20 0.82 Yes 0 0 No -32 0.82 Yes 38 86.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48704281 + NM_001193475 PPP1R21 1 6.48 3.22 67 10.86 88.27 28 6.42 Yes 55 1.25 Yes 0 0 No -27 0.72 Yes 43 82.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48706622 + NM_001193475 PPP1R21 1 7.99 4.14 67 5.2 70.02 27 6.04 Yes 14 0.65 No 26 0.79 Yes -26 0.88 Yes 44 90.42 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 48711011 + NM_001193475 PPP1R21 1 0.27 0.15 11 7.26 86.87 25 6.66 Yes 29 0.73 No 0 0 No -31 0.82 Yes 39 85.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 138375197 + NM_014811 PPP1R26 1 13.08 1.26 50 5.43 85.18 25 6.39 Yes 41 1.5 Yes 24 0.2 Yes -29 0.75 Yes 41 83.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 138376067 + NM_014811 PPP1R26 1 1.07 0.17 7 4.28 79.35 12 6.23 Yes -1 0.24 No 0 0 No -23 0.57 No 47 64.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100033391 - NM_001346938 PPP1R35 1 647.83 41.36 72 9.34 82.94 26 6.68 Yes 13 1.91 Yes 25 0.94 Yes -25 0.97 Yes 45 93.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 45646719 + NM_019121 PPP1R37 1 0.37 0.15 10 6.34 82.92 29 5.48 No 16 0.41 No 0 0 No -28 0.87 Yes 42 83.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 45646731 + NM_019121 PPP1R37 1 0.59 0.22 12 6.59 0 22 4.58 No 28 0.42 No 0 0 No -21 0.58 No 30 70.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 45648464 + NM_019121 PPP1R37 1 7.57 2.15 61 5.85 77.29 25 6.38 Yes 71 0.96 Yes 0 0 No -24 0.97 Yes 46 89.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 45648595 + NM_019121 PPP1R37 1 0.82 0.22 13 -11.11 0 15 4.36 No 62 -4.11 No 21 0.85 Yes -14 0.63 No 58 20.7 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 49138446 + NM_033215 PPP1R3F 1 66.08 4.82 70 8.73 85.28 28 8.9 Yes 51 0.19 No 25 0.75 Yes -21 0.49 No 43 59.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242097224 + NM_002712 PPP1R7 1 0.25 0.28 20 2.74 81.92 43 6.64 Yes 19 1.14 Yes 0 0 No -31 0.78 Yes 39 71.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242097880 + NM_002712 PPP1R7 1 0.74 2.14 63 -6.9 0 15 4.36 No NA NA NA 26 0.3 Yes -12 0.57 No 58 32.06 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 242106459 + NM_002712 PPP1R7 1 29.57 75.71 72 9.2 88.01 45 9.6 Yes 32 2.19 Yes 44 0.83 Yes -44 0.64 No 26 91.83 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 242110848 + NM_002712 PPP1R7 1 0.1 0.25 13 8.37 87.3 20 4.36 No 2 0.44 No 0 0 No -27 0.46 No 43 54.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28176606 + NM_002713 PPP1R8 1 0.21 0.38 22 -5.89 57.37 72 6.68 Yes 43 2.28 Yes 0 0 No -55 0.93 Yes 15 90.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 48213557 - NM_032595 PPP1R9B 1 0.04 0.14 8 4.86 0 9 3.87 No -4 0.28 No 0 0 No -33 0.8 Yes 37 90.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 48217725 - NM_032595 PPP1R9B 1 0.42 1.11 46 2.85 79.15 41 6.55 Yes 16 1.28 Yes 28 0.89 Yes -28 0.85 Yes 42 89.91 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 48218016 - NM_032595 PPP1R9B 1 0.04 0.11 7 7.06 79.31 29 6.3 Yes -4 0.71 No 0 0 No -28 0.52 No 45 70.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 48218500 - NM_032595 PPP1R9B 1 0.43 1.07 46 5.89 89.97 31 4.4 No 3 2.06 Yes 0 0 No -30 0.95 Yes 40 97.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 48219562 - NM_032595 PPP1R9B 1 0.32 0.68 30 6.42 82.01 30 5.82 Yes 17 0.75 No 0 0 No -29 0.89 Yes 41 77.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 133533529 - NM_002715 PPP2CA 1 0.04 0.33 16 2.47 0 10 4 No 66 1.28 Yes 0 0 No -29 0.45 No 41 71.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 133534920 - NM_002715 PPP2CA 1 0.02 0.14 8 -18.16 0 16 4.24 No 13 -2.5 No 26 0.73 Yes -15 0.48 No 61 25.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 133536199 - NM_002715 PPP2CA 1 0.07 0.31 13 0.68 74.75 23 5.2 No 22 1.25 Yes 20 0.74 Yes -22 0.56 No 23 39.3 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 133539256 - NM_002715 PPP2CA 1 0.06 0.47 24 1.64 71.81 18 4.9 No 15 0.74 No 0 0 No -23 0.67 Yes 43 55.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 30644011 - NM_001009552 PPP2CB 1 0.1 0.17 12 7.24 75.25 37 6.1 Yes 72 -3.95 No 21 0.42 Yes -30 0.45 No 40 66.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 30652250 - NM_001009552 PPP2CB 1 0.1 0.22 14 0.62 66.86 26 5.45 No 75 -5.42 No 0 0 No -24 0.87 Yes 46 85.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 52703526 + NM_014225 PPP2R1A 1 0.14 0.78 35 6.69 81.31 27 5.04 No 44 1.02 Yes 26 0.9 Yes -26 0.95 Yes 44 94.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 52714081 + NM_014225 PPP2R1A 1 0.04 0.18 10 2.84 77.76 22 4.63 No 73 -2.28 No 0 0 No -22 0.66 No 48 53.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 111612859 - NM_001177563 PPP2R1B 1 0.17 0.33 18 2.03 0 19 4.35 No 15 0.35 No 0 0 No -34 0.85 Yes 36 81.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 26151184 + NM_002717 PPP2R2A 1 0.17 0.18 11 -8.27 78.66 27 6.85 Yes 14 0.31 No 0 0 No -26 0.86 Yes 44 93.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 26166001 + NM_002717 PPP2R2A 1 0.05 0.1 7 3.45 69.04 35 4.87 No 64 1.53 Yes 0 0 No -34 0.42 No 36 51.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 26191001 + NM_002717 PPP2R2A 1 0.32 0.6 27 9.8 92.26 16 5.51 No 20 1.45 Yes 32 0.56 Yes -32 0.68 Yes 38 80.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 26196401 + NM_002717 PPP2R2A 1 0.05 0.1 7 -1.29 0 29 6.71 Yes 16 1.38 Yes 32 0.84 Yes -28 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 26196408 + NM_002717 PPP2R2A 1 3.98 7.64 72 2.91 72.87 36 7.21 Yes 23 1.36 Yes 0 0 No -35 0.88 Yes 35 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 26197418 + NM_002717 PPP2R2A 1 3.76 8.11 72 6.63 77.58 29 4.56 No 13 0.87 Yes 28 0.78 Yes -25 0.6 No 45 55.11 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 26206481 + NM_002717 PPP2R2A 1 0.11 0.24 14 7.8 87.46 36 5.47 No 23 0.82 Yes 0 0 No -19 0.51 No 51 56.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 26216422 + NM_002717 PPP2R2A 1 0.07 0.15 10 6.34 78.75 20 5.56 Yes 7 1.05 Yes 19 0.38 Yes -19 0.53 No 41 64.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 26216427 + NM_002717 PPP2R2A 1 0.22 0.49 27 1.99 0 25 5.98 Yes 12 1.03 Yes 19 0.38 Yes -24 0.66 No 46 63.93 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 26220195 + NM_002717 PPP2R2A 1 0.07 0.22 12 -8.38 0 13 3.91 No 34 0.01 No 31 0.77 Yes -12 0.64 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 133748397 + NM_018461 PPP2R2D 1 4.27 2.81 63 8.43 80.19 41 7.33 Yes 13 0.61 No 25 0.86 Yes -25 0.71 Yes 30 86.79 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 133757598 + NM_018461 PPP2R2D 1 3.08 3.67 70 9.42 90.36 25 5.18 No 48 0.62 No 24 0.87 Yes -24 0.89 Yes 46 84.29 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 133762613 + NM_018461 PPP2R2D 1 0.28 0.21 11 7.97 89.5 14 5.03 No NA NA NA 0 0 No -26 0.5 No 46 54.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 35557238 - NR_130972 PPP2R3C 1 0.23 0.24 15 10.12 95.65 16 6.32 Yes 47 -1.99 No 29 0.36 Yes -29 0.7 Yes 41 75.98 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 35564391 - NR_130972 PPP2R3C 1 3588.83 138.31 72 9.09 86.35 31 5.05 No 73 0.77 Yes 29 0.86 Yes -30 0.57 No 40 73.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 35564391 - NR_130972 PPP2R3C 1 15.2 0.54 29 9.09 86.35 31 5.05 No 73 0.77 Yes 29 0.86 Yes -30 0.57 No 40 73.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 35577473 - NR_130972 PPP2R3C 1 0.16 0.17 10 8.83 88.71 32 4.07 No 23 0.61 No 23 0.52 Yes -27 0.49 No 39 43.33 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 35579108 - NR_130972 PPP2R3C 1 0.1 0.21 12 -0.48 61.58 26 5.88 Yes 53 0.51 No 25 0.92 Yes -33 0.81 Yes 45 32.78 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 35585942 - NR_130972 PPP2R3C 1 0.58 0.14 9 -13.14 0 20 5.1 No 7 0.91 Yes 0 0 No -25 0.58 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 35585943 - NR_130972 PPP2R3C 1 3.66 0.68 36 -14.81 0 19 5.03 No 6 0.92 Yes 0 0 No -24 0.58 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 35585944 - NR_130972 PPP2R3C 1 484.72 87.67 72 8.46 88.98 18 4.97 No 5 0.93 Yes 18 0.62 Yes -23 0.53 No 38 74.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 212519131 + NM_001199756 PPP2R5A 1 0.07 0.11 8 2.15 0 16 4.44 No 68 -4.63 No 22 0.57 Yes -32 0.74 Yes 38 79.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 212519120 + NM_001199756 PPP2R5A 1 0.15 0.22 12 1.34 80.15 29 5.29 No 67 0.46 No 22 0.57 Yes -21 0.87 Yes 49 86.89 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 212519131 + NM_001199756 PPP2R5A 1 1.07 1.69 61 2.15 0 16 4.44 No 68 -4.63 No 22 0.57 Yes -32 0.74 Yes 38 79.16 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 212521315 + NM_001199756 PPP2R5A 1 0.15 0.18 10 3.14 79.05 24 5 No 11 0.77 No 0 0 No -23 0.58 No 47 52.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 212530304 + NM_001199756 PPP2R5A 1 0.7 1 37 2.96 75 20 4.69 No -2 0.84 Yes 0 0 No -19 0.82 Yes 51 81.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 212533981 + NM_001199756 PPP2R5A 1 0.1 0.14 9 -14.68 74.12 37 6.27 Yes 76 0.97 Yes 0 0 No -29 0.81 Yes 41 81.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64695237 + NM_006244 PPP2R5B 1 0.93 0.15 9 7.84 84.32 32 3.94 No 19 0.06 No 25 0.85 Yes -25 0.47 No 43 52.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 64699003 + NM_006244 PPP2R5B 1 0.88 0.17 8 7.7 90.88 23 5 No -2 0.87 Yes 22 0.86 Yes -22 0.88 Yes 48 88.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 102349616 + NM_001161725 PPP2R5C 1 0.07 0.18 10 4.92 76.91 14 4 No 35 1.42 Yes 25 0.82 Yes -57 0.4 No 27 72.75 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 102350111 + NM_001161725 PPP2R5C 1 0.07 0.17 10 13.53 81.58 33 7.48 Yes 20 1.51 Yes 0 0 No -32 0.96 Yes 38 96.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102363757 + NM_001161725 PPP2R5C 1 0.04 0.13 8 1.09 84.41 29 5.74 Yes 59 2.25 Yes 0 0 No -28 0.72 Yes 42 72.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102367273 + NM_001161725 PPP2R5C 1 0.11 0.33 17 7.65 83.74 26 5.66 Yes -2 1.07 Yes 0 0 No -25 0.91 Yes 45 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102378715 + NM_001161725 PPP2R5C 1 0.1 0.24 14 5.73 78.66 18 5.18 No 48 0.81 Yes 28 0.93 Yes -35 0.83 Yes 35 72.51 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 102378739 + NM_001161725 PPP2R5C 1 0.07 0.17 9 -8.64 77.29 31 5.24 No 18 1.47 Yes 28 0.93 Yes -30 0.92 Yes 40 95.58 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 102388320 + NM_001161725 PPP2R5C 1 0.62 0.18 11 6.2 85.18 28 6.52 Yes -1 0.7 No 0 0 No -27 0.61 No 43 63.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 102387429 + NM_001161725 PPP2R5C 1 1.3 0.31 17 4.19 0 50 8.01 Yes 34 0.98 Yes 39 0.02 Yes -45 0.31 No 23 42.64 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 102388320 + NM_001161725 PPP2R5C 1 3.51 1 46 6.2 85.18 28 6.52 Yes -1 0.7 No 0 0 No -27 0.61 No 43 63.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42978371 + NM_001270476 PPP2R5D 1 0.56 0.53 29 6.88 79.35 18 5.39 No 5 1.4 Yes 25 0.77 Yes -17 0.5 No 53 86.2 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 63847553 - NM_001282179 PPP2R5E 1 0.19 0.4 22 6.51 82.63 17 6.24 Yes 4 0.77 No 0 0 No -25 0.64 No 45 70.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 63955564 - NM_001282179 PPP2R5E 1 0.06 0.14 9 4.53 83.56 16 6 Yes 3 0.44 No 0 0 No -31 0.5 No 39 61.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 63977608 - NM_001282179 PPP2R5E 1 0.07 0.17 10 12.21 88.45 20 6.25 Yes 54 1.59 Yes 0 0 No -22 0.31 No 48 56.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 64006411 - NM_001282179 PPP2R5E 1 395.75 87.78 72 6.98 90.96 19 8.44 Yes 6 0.75 No 21 0.56 Yes -21 0.68 Yes 49 69.15 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr4 102015069 - NM_000944 PPP3CA 1 0.53 0.42 24 1.66 0 38 6.12 Yes 39 0.38 No 0 0 No -34 0.57 No 36 72.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 102092384 - NM_000944 PPP3CA 1 0.92 0.78 35 4.16 87.4 21 4.3 No 8 0.57 No 20 0.81 Yes -20 0.88 Yes 50 75.59 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr4 102104429 - NM_000944 PPP3CA 1 0.31 0.24 11 5.37 71.09 54 7.09 Yes 32 1.36 Yes 0 0 No -53 0.57 No 26 74.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 102114837 - NM_000944 PPP3CA 1 0.18 0.13 9 0.37 83.32 27 5.68 Yes 14 0.3 No 0 0 No -26 0.74 Yes 44 61.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 75206335 - NM_001289968 PPP3CB 1 104.04 128 72 0.37 71.01 37 6.03 Yes 24 1.29 Yes 30 0.77 Yes -36 0.63 No 34 78.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 75206335 - NM_001289968 PPP3CB 1 0.32 0.4 22 0.37 71.01 37 6.03 Yes 24 1.29 Yes 30 0.77 Yes -36 0.63 No 34 78.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr10 75230534 - NM_001289968 PPP3CB 1 1.5 2.54 61 -0.41 0 10 3.87 No 11 0.6 No 0 0 No -23 0.63 No 47 59.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 75230555 - NM_001289968 PPP3CB 1 0.25 0.42 17 1.62 60.95 33 6.46 Yes 49 -4.42 No 23 0.78 Yes -32 0.58 No 38 60.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 75230964 - NM_001289968 PPP3CB 1 0.56 1.15 48 3.17 0 43 4.73 No 30 0.88 Yes 0 0 No -35 0.67 Yes 35 66.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 75231388 - NM_001289968 PPP3CB 1 0.09 0.11 7 3.09 70.9 18 5.26 No 43 0.66 No 22 0.78 Yes -24 0.26 No 46 42.89 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 22318846 + NM_001243975 PPP3CC 1 0.13 0.11 8 6.76 73.22 21 6.14 Yes 8 1.67 Yes 0 0 No -20 0.71 Yes 50 73.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22321344 + NM_001243975 PPP3CC 1 0.25 0.19 12 9.63 93.31 28 5.28 No 73 -2.18 No 0 0 No -27 0.7 Yes 43 59.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 22335159 + NM_001243975 PPP3CC 1 5.47 6.39 67 8.81 87.44 33 6 Yes 20 1 Yes 0 0 No -32 0.88 Yes 38 92.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22350389 + NM_001243975 PPP3CC 1 0.28 0.32 18 7.81 92.34 20 5.46 No 70 -3.84 No 0 0 No -23 0.85 Yes 47 77.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 22351644 + NM_001243975 PPP3CC 1 0.36 0.4 21 9.49 80.68 23 5.37 No 10 0.69 No 0 0 No -26 0.73 Yes 44 83.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 22352472 + NM_001243975 PPP3CC 1 0.08 0.1 7 6.49 83.92 28 5.19 No 43 -2.35 No 0 0 No -31 0.86 Yes 39 90.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 22359152 + NM_001243975 PPP3CC 1 0.4 0.47 21 8.26 97.39 20 6.04 Yes 74 1.02 Yes 0 0 No -25 0.55 No 45 67.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 22362562 + NM_001243975 PPP3CC 1 0.14 0.13 8 9.28 91.35 41 7.86 Yes 45 0.42 No 0 0 No -26 0.55 No 44 64.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 22363210 + NM_001243975 PPP3CC 1 0.18 0.18 11 1.16 71.85 23 4.83 No 76 -3.42 No 0 0 No -23 0.6 No 47 47.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 22370809 + NM_001243975 PPP3CC 1 0.08 0.1 7 1.33 0 38 7.81 Yes 25 1.52 Yes 0 0 No -37 0.77 Yes 33 85.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22369678 + NM_001243975 PPP3CC 1 0.19 0.25 15 11.03 92.16 25 5.04 No 2 1.16 Yes 0 0 No -24 0.47 No 46 63.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 22370809 + NM_001243975 PPP3CC 1 0.31 0.42 25 1.33 0 38 7.81 Yes 25 1.52 Yes 0 0 No -37 0.77 Yes 33 85.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22380182 + NM_001243975 PPP3CC 1 0.18 0.18 13 2.27 78.63 18 4.9 No 16 0.44 No 0 0 No -34 0.51 No 36 74.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 22381155 + NM_001243975 PPP3CC 1 6.6 7.56 72 7.53 78.73 41 8.74 Yes 73 -0.46 No 26 0.55 Yes -26 0.53 No 44 64.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 22389741 + NM_001243975 PPP3CC 1 0.32 0.4 26 -3.32 0 45 5.29 No 32 1.6 Yes 0 0 No -31 0.4 No 43 71.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 22396981 + NM_001243975 PPP3CC 1 344.79 70.25 72 10.23 83.6 52 8.6 Yes 39 1.86 Yes 26 0.58 Yes -51 0.85 Yes 19 94.72 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 22397244 + NM_001243975 PPP3CC 1 0.89 0.21 12 6.03 74.08 27 5.57 Yes 23 0.4 No 0 0 No -24 0.81 Yes 46 76.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 68408136 - NM_000945 PPP3R1 1 0.25 0.75 35 1.59 0 11 4 No 16 0.48 No 0 0 No -28 0.66 No 42 62.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 68409787 - NM_000945 PPP3R1 1 0.1 0.29 16 8.88 82.63 25 6.65 Yes 12 1.9 Yes 0 0 No -24 0.81 Yes 46 90.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 68413723 - NM_000945 PPP3R1 1 0.83 2.08 58 3.14 78.11 36 6.39 Yes 71 0.92 Yes 0 0 No -24 0.51 No 46 78.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 68413723 - NM_000945 PPP3R1 1 0.18 0.39 20 3.14 78.11 36 6.39 Yes 71 0.92 Yes 0 0 No -24 0.51 No 46 78.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 68416974 - NM_000945 PPP3R1 1 0.08 0.18 10 3.85 84 15 4.78 No 2 1.51 Yes 0 0 No -52 0.55 No 18 53.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 68416998 - NM_000945 PPP3R1 1 0.64 1.19 47 1.43 82.09 28 6.61 Yes 58 1.12 Yes 0 0 No -28 0.49 No 42 57.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 68442620 - NM_000945 PPP3R1 1 0.09 0.21 11 7.7 85.41 46 6.48 Yes 33 0.4 No 0 0 No -41 0.4 No 29 58.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 68452740 - NM_000945 PPP3R1 1 0.28 0.38 19 6.34 81.43 17 4.01 No 4 0.96 Yes 0 0 No -27 0.72 Yes 43 62.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 30087638 + NM_001303503 PPP4C 1 0.3 0.14 9 -9.6 74.07 33 7.55 Yes 20 1.23 Yes 0 0 No -32 0.92 Yes 38 89.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30092520 + NM_001303503 PPP4C 1 1.28 3.72 69 6.54 67.62 26 6.56 Yes 13 1.03 Yes 25 0.86 Yes -25 0.75 Yes 45 85.41 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 30093806 + NM_001303503 PPP4C 1 0.05 0.17 10 -15.61 0 33 5.38 No 20 0.39 No 0 0 No -26 0.67 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 30094070 + NM_001303503 PPP4C 1 0.04 0.14 10 1.63 0 37 6.14 Yes 24 -0.58 No 0 0 No -33 0.64 No 37 63.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30094937 + NM_001303503 PPP4C 1 0.02 0.13 9 -11.81 0 19 3.81 No 72 -4.71 No 33 0.82 Yes -42 0.33 No 22 63.69 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 30094944 + NM_001303503 PPP4C 1 0.02 0.13 8 -5.05 0 10 4 No 71 -4.77 No 33 0.82 Yes -9 0.26 No 15 49.16 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 9547929 - NM_001042388 PPP4R1 1 0.79 0.57 27 5.32 79.63 31 5.57 Yes 61 0.88 Yes 0 0 No -26 0.6 No 40 76.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 9559540 - NM_001042388 PPP4R1 1 0.35 0.33 17 8.55 84.55 18 5 No 5 2.2 Yes 28 0.68 Yes -28 0.8 Yes 42 78.55 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 9562042 - NM_001042388 PPP4R1 1 0.37 0.32 16 5.97 79.24 37 6.4 Yes 24 1.03 Yes 0 0 No -36 0.55 No 34 62.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 9563009 - NM_001042388 PPP4R1 1 0.26 0.21 11 4.1 85.64 21 6.56 Yes 47 1.53 Yes 20 0.91 Yes -20 0.68 Yes 50 78.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 9563043 - NM_001042388 PPP4R1 1 0.79 0.76 37 2.51 83.89 26 5.85 Yes 13 1.55 Yes 20 0.91 Yes -25 0.81 Yes 45 81.19 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 9563045 - NM_001042388 PPP4R1 1 9.36 8.42 72 -3.17 83.57 24 5.71 Yes 11 1.55 Yes 23 0.88 Yes -23 0.79 Yes 47 78.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 9584765 - NM_001042388 PPP4R1 1 0.58 0.5 28 8.79 83.72 24 5.09 No 61 0.72 No 0 0 No -21 0.78 Yes 47 78.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 9594233 - NM_001042388 PPP4R1 1 0.8 0.6 33 8.53 76.57 10 5.44 No 61 0.63 No 26 0.6 Yes -26 0.56 No 46 42.05 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 9595101 - NM_001042388 PPP4R1 1 243.3 27.08 72 5.32 85.28 22 5.78 Yes 9 0.89 Yes 29 0.83 Yes -21 0.77 Yes 49 89.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 73049871 + NM_174907 PPP4R2 1 0.66 2.06 63 6.02 83.54 18 5.25 No -4 0.03 No 0 0 No -21 0.36 No 49 44.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 73091536 + NM_174907 PPP4R2 1 0.2 0.65 34 4.74 84.41 30 6.42 Yes 23 1 Yes 0 0 No -29 0.71 Yes 41 67.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 73100590 + NM_174907 PPP4R2 1 0.06 0.25 13 8.43 86.14 30 4.51 No 27 -0.41 No 0 0 No -23 0.44 No 47 48.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 73113183 + NM_174907 PPP4R2 1 0.13 0.36 17 0.63 73.75 26 6.01 Yes 40 0.9 Yes 20 0.76 Yes -25 0.72 Yes 45 71.5 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 73113215 + NM_174907 PPP4R2 1 0.34 0.93 43 2.86 84.58 21 3.87 No 72 0.91 Yes 20 0.76 Yes -20 0.61 No 50 78.54 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 73114549 + NM_174907 PPP4R2 1 0.09 0.26 14 -4.34 78.12 30 7.66 Yes 47 0.25 No 0 0 No -24 0.7 Yes 46 73.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 91928557 - NM_001284281 PPP4R3A 1 0.76 2.67 66 -3.26 0 12 4.2 No 37 0.43 No 0 0 No -31 0.8 Yes 39 90.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 91928566 - NM_001284281 PPP4R3A 1 3.18 10.93 72 1.82 81.3 23 5.2 No 28 0.45 No 22 0.97 Yes -22 0.92 Yes 48 92.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 91929218 - NM_001284281 PPP4R3A 1 0.17 0.49 24 -0.63 0 46 7.26 Yes 33 1.39 Yes 0 0 No -35 0.55 No 35 72.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 91932761 - NM_001284281 PPP4R3A 1 7.45 17.88 72 9.04 82.49 32 5.16 No 19 0.75 No 22 0.73 Yes -31 0.8 Yes 39 74.79 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 91932800 - NM_001284281 PPP4R3A 1 0.22 0.51 27 2.96 70.47 42 5.95 Yes 29 0.68 No 22 0.73 Yes -30 0.82 Yes 29 74.05 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 91935348 - NM_001284281 PPP4R3A 1 0.23 0.58 30 6.64 71.44 28 5.96 Yes 12 0.19 No 0 0 No -27 0.65 No 49 67.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 91935457 - NM_001284281 PPP4R3A 1 0.17 0.42 20 11.69 95.65 26 6.24 Yes 13 1.52 Yes 0 0 No -25 0.92 Yes 45 93.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 91970919 - NM_001284281 PPP4R3A 1 0.07 0.13 9 7.17 82.76 28 4.45 No 58 0.46 No 0 0 No -27 0.66 No 47 60.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 91971247 - NM_001284281 PPP4R3A 1 0.06 0.11 7 7.16 80.02 19 5.01 No 45 0.12 No 0 0 No -22 0.82 Yes 48 75.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55777168 - NM_020463 PPP4R3B 1 0.1 0.31 20 3.89 72.66 31 5.92 Yes 48 1.19 Yes 29 0.49 Yes -30 0.77 Yes 40 84.23 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 55787091 - NM_020463 PPP4R3B 1 0.11 0.36 22 5.24 80.12 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.69 Yes 51 89.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55791607 - NM_020463 PPP4R3B 1 0.44 0.92 46 -0.91 0 12 3.87 No 30 0.5 No 0 0 No -31 0.9 Yes 39 89.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55791613 - NM_020463 PPP4R3B 1 10.33 21.71 72 3.21 72.81 26 5.48 No 24 0.51 No 0 0 No -25 0.94 Yes 45 96.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55792348 - NM_020463 PPP4R3B 1 0.08 0.28 14 6.87 81.46 25 5.92 Yes 12 0.87 Yes 0 0 No -28 0.53 No 42 61.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 55800875 - NM_020463 PPP4R3B 1 1.42 0.36 20 6.3 76.25 18 5.29 No 49 0.05 No 22 0.74 Yes -23 0.38 No 47 71.97 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr2 55800914 - NM_020463 PPP4R3B 1 1073.39 319.31 72 7.72 85.02 15 3.68 No 54 0.69 No 22 0.89 Yes -22 0.88 Yes 48 85.2 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 55801538 - NM_020463 PPP4R3B 1 9.88 2.79 66 1.55 0 22 3.38 No 6 0.25 No 0 0 No -21 0.81 Yes 49 56.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 55801550 - NM_020463 PPP4R3B 1 0.95 0.32 20 2.29 68.15 28 4.73 No 30 0.22 No 0 0 No -27 0.29 No 45 37.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 55805479 - NM_020463 PPP4R3B 1 144.45 162.1 72 10.31 93.99 22 8.12 Yes 9 1.24 Yes 21 0.9 Yes -21 0.81 Yes 49 90.82 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 55806945 - NM_020463 PPP4R3B 1 0.04 0.11 7 -3.29 0 14 3.79 No 67 1.62 Yes 31 0.8 Yes -34 0.79 Yes 36 74.45 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 55818712 - NM_020463 PPP4R3B 1 0.36 1.07 44 6.9 82.05 58 7.35 Yes 73 -3.1 No 0 0 No -32 0.95 Yes 38 96.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55818832 - NM_020463 PPP4R3B 1 0.9 2.57 64 4.38 79.84 36 5.65 Yes 1 0.83 Yes 0 0 No -35 0.66 No 35 71.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 55819179 - NM_020463 PPP4R3B 1 0.04 0.13 7 12.63 90.03 21 5.17 No 53 -3.29 No 0 0 No -21 0.68 Yes 49 61.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 55824935 - NM_020463 PPP4R3B 1 0.13 0.35 16 2.37 83.04 30 7.85 Yes 17 1.14 Yes 0 0 No -29 0.81 Yes 41 75.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55837059 - NM_020463 PPP4R3B 1 0.08 0.18 7 5.54 85.26 21 4.7 No 8 0.41 No 0 0 No -24 0.97 Yes 46 97.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 55842450 - NM_020463 PPP4R3B 1 0.24 0.56 31 12.33 97.95 30 4.71 No 17 0.26 No 0 0 No -29 0.51 No 41 59.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46866708 + NM_006247 PPP5C 1 0.18 0.29 18 11.45 95.1 27 8.03 Yes 14 1.17 Yes 0 0 No -26 0.96 Yes 44 97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46887040 + NM_006247 PPP5C 1 1 1.53 52 3.86 0 70 10.16 Yes 57 2.44 Yes 22 0.14 Yes -26 0.43 No 18 43.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 46887045 + NM_006247 PPP5C 1 0.12 0.21 11 -11.65 0 12 4.24 No 62 2.43 Yes 22 0.14 Yes -57 0.5 No 13 45.66 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 46891910 + NM_006247 PPP5C 1 0.06 0.11 7 5.42 80.73 23 5.92 Yes 74 -5.66 No 0 0 No -23 0.71 Yes 47 59.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 127913046 - NM_001123369 PPP6C 1 0.5 1.53 56 9.82 85.71 46 6.93 Yes 33 0.64 No 0 0 No -28 0.66 Yes 42 73.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127914798 - NM_001123369 PPP6C 1 0.59 1.86 54 11.04 92.89 25 6.18 Yes 44 -1.8 No 0 0 No -24 0.57 No 41 57.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 127916015 - NM_001123369 PPP6C 1 0.34 1.31 46 -0.01 0 10 4 No 21 0.8 Yes 0 0 No -33 0.73 Yes 37 86.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127923185 - NM_001123369 PPP6C 1 1.79 0.17 9 -11.51 0 30 5.72 Yes 52 0.93 Yes 0 0 No -26 0.56 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 127923186 - NM_001123369 PPP6C 1 2911.55 308.44 72 7.18 82.6 29 5.63 Yes 51 0.93 Yes 28 0.75 Yes -25 0.58 No 45 60.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 127923186 - NM_001123369 PPP6C 1 1.37 0.15 11 7.18 82.6 29 5.63 Yes 51 0.93 Yes 28 0.75 Yes -25 0.58 No 45 60.3 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 127927676 - NM_001123369 PPP6C 1 0.67 0.1 7 1.67 83 16 6.69 Yes 28 0.85 Yes 0 0 No -30 0.83 Yes 40 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127934281 - NM_001123369 PPP6C 1 0.43 1.1 47 7.21 79.34 28 4.49 No 26 1.18 Yes 27 0.84 Yes -27 0.96 Yes 43 97.88 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 127937479 - NM_001123369 PPP6C 1 0.05 0.11 7 7.69 88.56 47 7.06 Yes 34 1.98 Yes 0 0 No -46 0.76 Yes 24 81.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127951355 - NM_001123369 PPP6C 1 0.13 0.33 17 9.18 78.71 29 6.99 Yes 16 0.28 No 0 0 No -28 0.9 Yes 42 96.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 55741896 - NM_014931 PPP6R1 1 0.29 0.88 36 5.4 0 30 6.63 Yes 17 1.46 Yes 0 0 No -29 0.92 Yes 41 92.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55743577 - NM_014931 PPP6R1 1 0.02 0.13 7 -27.91 60.52 25 5.29 No 70 -0.24 No 0 0 No -24 0.82 Yes 46 86.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 55743756 - NM_014931 PPP6R1 1 0.03 0.17 10 4.84 74.61 49 8.91 Yes 36 0.91 Yes 0 0 No -48 0.92 Yes 22 95.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55751505 - NM_014931 PPP6R1 1 0.05 0.17 10 3.98 80.7 16 4.69 No 67 -4.52 No 24 0.76 Yes -15 0.22 No 55 29.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 55751732 - NM_014931 PPP6R1 1 0.84 3.54 68 -1.21 75.02 22 4.9 No 36 -2.96 No 0 0 No -21 0.77 Yes 49 78.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 55751860 - NM_014931 PPP6R1 1 0.25 1.21 38 7.29 84.53 17 9.04 Yes 64 -0.78 No 0 0 No -19 0.52 No 51 83.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 55752745 - NM_014931 PPP6R1 1 0.06 0.17 10 -3.99 0 19 4.24 No 23 -0.29 No 0 0 No -35 0.69 Yes 31 40.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 55753050 - NM_014931 PPP6R1 1 0.04 0.13 9 5.63 73.76 21 6.78 Yes NA NA NA 29 0.93 Yes -20 0.48 No 31 47.93 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 55753206 - NM_014931 PPP6R1 1 0.13 0.42 22 7.46 80.89 17 7.62 Yes 4 1.89 Yes 0 0 No -25 0.49 No 47 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 55756941 - NM_014931 PPP6R1 1 0.06 0.24 14 5.6 80.72 39 6.47 Yes 61 -4.58 No 0 0 No -24 0.52 No 46 62.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 55757001 - NM_014931 PPP6R1 1 0.09 0.28 17 2.74 0 19 4.47 No 6 0.76 No 0 0 No -18 0.91 Yes 52 85.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 55763498 - NM_014931 PPP6R1 1 0.12 0.11 8 10.01 94.06 38 8.74 Yes 3 0.97 Yes 0 0 No -18 0.72 Yes 33 64.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 55768439 - NM_014931 PPP6R1 1 0.59 0.53 29 9.12 84.71 42 7.65 Yes 21 0.44 No 0 0 No -33 0.74 Yes 37 65.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50798482 + NM_014678 PPP6R2 1 0.29 0.19 12 11.58 92.48 24 5.29 No 11 1.2 Yes 0 0 No -23 0.75 Yes 47 91.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50827414 + NM_014678 PPP6R2 1 8.44 9.13 72 6.04 87.46 22 5.1 No 35 1.18 Yes 21 0.7 Yes -24 0.65 No 49 69.32 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 50827462 + NM_014678 PPP6R2 1 6.78 7.19 72 4.31 81.83 27 6.76 Yes 40 -1.37 No 0 0 No -23 0.79 Yes 47 75.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50829929 + NM_014678 PPP6R2 1 0.88 0.94 42 5.63 72.38 27 5.09 No 14 0.43 No 0 0 No -26 0.79 Yes 44 78.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50830295 + NM_014678 PPP6R2 1 2.3 2.46 66 5.75 81.84 24 6.66 Yes 71 0.6 No 23 0.42 Yes -32 0.64 No 38 76.28 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr22 50832178 + NM_014678 PPP6R2 1 0.9 0.99 47 8.58 85.99 33 6.24 Yes 20 0.54 No 0 0 No -32 0.78 Yes 38 79.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50845095 + NM_014678 PPP6R2 1 1.03 1.26 48 5.27 82.99 14 5.1 No 1 1.16 Yes 0 0 No -30 0.56 No 48 59.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50845163 + NM_014678 PPP6R2 1 2.37 2.89 68 8.37 73.62 19 5.51 No 69 1.11 Yes 0 0 No -26 0.87 Yes 44 87.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50852998 + NM_014678 PPP6R2 1 0.61 0.51 28 0.67 79.41 16 4.37 No 0 0.51 No 0 0 No -25 0.84 Yes 45 70.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50856060 + NM_014678 PPP6R2 1 0.2 0.13 9 6.03 87.32 26 7.27 Yes 47 2.09 Yes 0 0 No -25 0.73 Yes 45 86.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50857774 + NM_014678 PPP6R2 1 0.28 0.21 14 7.3 79.35 19 5.39 No 6 1.71 Yes 18 0.56 Yes -18 0.63 No 52 77.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 50857774 + NM_014678 PPP6R2 1 4.89 3.71 70 7.3 79.35 19 5.39 No 6 1.71 Yes 18 0.56 Yes -18 0.63 No 52 77.43 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr22 50860687 + NM_014678 PPP6R2 1 1.51 1.08 45 -0.87 0 27 7.55 Yes 47 -0.51 No 0 0 No -26 0.8 Yes 44 93.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50861893 + NM_014678 PPP6R2 1 0.42 0.49 26 0.78 70.79 31 6.69 Yes 18 1.44 Yes 0 0 No -30 0.87 Yes 40 91.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50868245 + NM_014678 PPP6R2 1 0.52 0.6 27 6.16 80.83 15 5.26 No 2 0.8 Yes 0 0 No -27 0.74 Yes 43 67.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 50868373 + NM_014678 PPP6R2 1 0.66 0.68 31 7.83 77.95 21 5.19 No 8 0.63 No 0 0 No -25 0.64 No 47 46.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50873399 + NM_014678 PPP6R2 1 0.28 0.21 13 1.83 0 26 6.56 Yes NA NA NA 0 0 No -25 0.75 Yes 45 79.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50875416 + NM_014678 PPP6R2 1 243.92 52.58 72 11.04 74.81 32 10.1 Yes 19 1.28 Yes 31 0.96 Yes -31 0.8 Yes 39 84.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50875497 + NM_014678 PPP6R2 1 2.04 0.46 25 5.49 88.7 21 4.9 No 59 1.74 Yes 0 0 No -20 0.91 Yes 50 91.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50875931 + NM_014678 PPP6R2 1 2.64 0.57 33 -5.34 0 39 7.5 Yes 26 1.87 Yes 41 0.53 Yes -38 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 50878126 + NM_014678 PPP6R2 1 7.19 5.89 71 9.11 85.01 22 6.71 Yes 9 2.12 Yes 21 0.94 Yes -21 0.87 Yes 49 93.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50878359 + NM_014678 PPP6R2 1 0.11 0.11 8 4.47 85.25 21 4.9 No 58 -2.34 No 25 0.94 Yes -17 0.46 No 53 53.19 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 50879229 + NM_014678 PPP6R2 1 1.86 1.25 47 7.05 71.84 24 6.86 Yes 11 1.77 Yes 23 0.88 Yes -23 0.87 Yes 47 88.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 50879234 + NM_014678 PPP6R2 1 0.34 0.24 14 -3.24 0 29 7.21 Yes 16 1.75 Yes 25 0.66 Yes -28 0.81 Yes 42 66.7 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr22 50882631 + NM_014678 PPP6R2 1 1.03 0.6 31 -5.9 0 25 6.85 Yes 70 -2.75 No 21 0.76 Yes -25 0.71 Yes 46 59.18 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 68228834 + NM_018312 PPP6R3 1 0.15 0.11 7 7.98 82.92 32 6.16 Yes 63 -1.73 No 0 0 No -32 0.58 No 38 61.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 68229094 + NM_018312 PPP6R3 1 3.26 2.1 61 6.89 90.37 25 4.88 No 60 1.14 Yes 0 0 No -24 0.66 No 46 51.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 68247231 + NM_018312 PPP6R3 1 0.14 0.1 7 5.94 0 33 6.24 Yes 20 0.84 Yes 0 0 No -32 0.67 Yes 38 88.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68282495 + NM_018312 PPP6R3 1 13.41 1.76 59 6.94 97.75 20 3.9 No 44 0.63 No 26 0.39 Yes -19 0.65 No 46 68.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68282495 + NM_018312 PPP6R3 1 2.29 0.28 18 6.94 97.75 20 3.9 No 44 0.63 No 26 0.39 Yes -19 0.65 No 46 68.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68289961 + NM_018312 PPP6R3 1 2.21 4.53 70 8.31 91.87 32 6.38 Yes 19 0.58 No 21 0.63 Yes -32 0.45 No 49 51.65 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68303917 + NM_018312 PPP6R3 1 0.07 0.13 8 8.31 87.64 29 7.54 Yes 16 1.09 Yes 0 0 No -28 0.94 Yes 42 96.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68305131 + NM_018312 PPP6R3 1 0.53 1.07 45 -0.54 0 30 6.17 Yes 17 0.06 No 0 0 No -32 0.68 Yes 38 70.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 68305172 + NM_018312 PPP6R3 1 0.06 0.13 8 5.08 71.07 25 6.44 Yes 2 0.99 Yes 0 0 No -24 0.59 No 52 68.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 68310947 + NM_018312 PPP6R3 1 0.07 0.15 10 10.42 88.37 19 5.17 No 6 1.24 Yes 0 0 No -34 0.8 Yes 36 91.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68318457 + NM_018312 PPP6R3 1 0.57 1.47 51 5.55 82.1 39 7.87 Yes 26 0.78 Yes 38 0.3 Yes -38 0.96 Yes 32 97.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 68321190 + NM_018312 PPP6R3 1 0.26 0.71 37 2.83 82.53 21 5 No 66 0.59 No 0 0 No -24 0.68 Yes 46 54.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 68325645 + NM_018312 PPP6R3 1 0.14 0.36 20 7.12 80.31 33 5.72 Yes 7 1.54 Yes 20 0.7 Yes -32 0.83 Yes 38 87.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 68325683 + NM_018312 PPP6R3 1 0.07 0.15 8 8.04 80.98 31 5.92 Yes 45 1.51 Yes 0 0 No -30 0.44 No 40 39.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 68350510 + NM_018312 PPP6R3 1 2.29 0.97 44 6.75 85.7 30 5.69 Yes 46 0.66 No 30 0.57 Yes -29 0.74 Yes 41 65.51 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 68346077 + NM_018312 PPP6R3 1 20.94 8.83 72 9.52 92.98 24 5.81 Yes 11 1.26 Yes 0 0 No -28 0.75 Yes 42 83.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68350510 + NM_018312 PPP6R3 1 436.53 180.5 72 6.75 85.7 30 5.69 Yes 46 0.66 No 30 0.57 Yes -29 0.74 Yes 41 65.51 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 68355265 + NM_018312 PPP6R3 1 0.33 0.14 9 9.38 86.33 24 6.63 Yes 11 0.98 Yes 23 0.75 Yes -23 0.8 Yes 47 57.36 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr11 68355378 + NM_018312 PPP6R3 1 0.6 0.25 15 -0.54 0 19 4.71 No 64 -3.93 No 20 0.73 Yes -27 0.53 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68355379 + NM_018312 PPP6R3 1 0.24 0.11 8 -4.22 0 20 4.79 No 65 -3.93 No 20 0.73 Yes -28 0.56 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68355385 + NM_018312 PPP6R3 1 0.3 0.11 8 -1.19 0 26 5.38 No 71 -3.93 No 20 0.73 Yes -17 0.36 No NA NA NA BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68355412 + NM_018312 PPP6R3 1 6.86 2.86 69 5.56 85.36 21 5.19 No -4 0.2 No 20 0.15 Yes -22 0.46 No 50 58.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 68355445 + NM_018312 PPP6R3 1 5.09 2.22 62 5.26 79.89 22 6.48 Yes 9 0.77 Yes 29 0.65 Yes -21 0.57 No 49 51.27 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 68359921 + NM_018312 PPP6R3 1 0.08 0.19 10 8.7 85.58 25 4.53 No 2 1.22 Yes 0 0 No -24 0.42 No 46 33.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 68367788 + NM_018312 PPP6R3 1 0.04 0.13 8 5.52 79.19 18 4.79 No 46 1.75 Yes 26 0.59 Yes -21 0.66 No 49 74.92 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr11 68369338 + NM_018312 PPP6R3 1 0.11 0.26 16 -6 0 13 4.12 No 23 1.06 Yes 27 0.46 Yes -35 0.84 Yes 35 91.16 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 68369560 + NM_018312 PPP6R3 1 0.07 0.11 7 7.2 86.61 25 5.57 Yes -2 0.7 No 0 0 No -24 0.85 Yes 46 80.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 68370815 + NM_018312 PPP6R3 1 0.19 0.39 23 2.23 0 9 3.87 No 17 1.01 Yes 0 0 No -29 0.86 Yes 41 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68373968 + NM_018312 PPP6R3 1 0.5 1.04 42 9.05 85.86 29 5.57 Yes 25 0.51 No 0 0 No -28 0.92 Yes 42 96.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 68377322 + NM_018312 PPP6R3 1 0.1 0.22 10 6.92 75.73 22 6.45 Yes 9 1.41 Yes 0 0 No -26 0.78 Yes 44 79.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68380503 + NM_018312 PPP6R3 1 2.66 5.35 72 2.45 72.8 34 6.08 Yes 21 0.51 No 33 0.81 Yes -33 0.86 Yes 37 91.78 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 68382099 + NM_018312 PPP6R3 1 0.15 0.31 15 8.49 82.08 38 6.46 Yes 25 2.22 Yes 30 0.82 Yes -37 0.5 No 33 66.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 103898476 + NM_015062 PPRC1 1 1.75 1.28 51 5.65 83.32 23 5.39 No 10 0.48 No 0 0 No -22 0.9 Yes 48 82.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 103908390 + NM_015062 PPRC1 1 4.21 4.26 65 3.15 0 9 3.87 No 14 1.24 Yes 0 0 No -26 0.87 Yes 44 80.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 40544511 - NM_001142604 PPT1 1 0.11 0.19 12 8.53 87.19 24 5.72 Yes 17 0.59 No 26 0.76 Yes -23 0.75 Yes 47 72.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 110976561 - NM_139283 PPTC7 1 0.89 1.32 51 10.67 85.59 35 6.32 Yes 22 0.59 No 0 0 No -28 0.66 No 36 58.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 110976600 - NM_139283 PPTC7 1 0.13 0.21 13 2.04 61.36 32 5.66 Yes 19 0.13 No 0 0 No -31 0.46 No 54 34.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 111020188 - NM_139283 PPTC7 1 0.13 0.11 7 3 73.4 70 9.22 Yes 57 2.32 Yes 0 0 No -27 0.42 No 25 35.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 64859629 + NM_015342 PPWD1 1 2.16 3.15 70 8.18 85.84 50 8.29 Yes 37 2.06 Yes 33 0.83 Yes -33 0.65 No 37 62.13 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 64864744 + NM_015342 PPWD1 1 1.13 1.57 49 3.77 81.23 43 5.54 No 30 0.85 Yes 31 0.86 Yes -31 0.85 Yes 39 87.19 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 64865463 + NM_015342 PPWD1 1 0.2 0.28 17 -0.92 0 30 6.59 Yes 64 0.61 No 24 0.87 Yes -29 0.77 Yes 41 80.45 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 64875311 + NM_015342 PPWD1 1 0.44 0.5 25 6.98 89.8 22 5.66 Yes 9 0.58 No 21 0.69 Yes -21 0.66 No 49 62.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chrX 48758795 + NM_001167992 PQBP1 1 0.33 0.64 30 5.36 81.25 23 4.8 No 74 0.53 No 22 0.84 Yes -22 0.73 Yes 48 41.67 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chrX 48759074 + NM_001167992 PQBP1 1 0.13 0.32 19 8.6 98.23 19 4.8 No 6 1.42 Yes 0 0 No -18 0.82 Yes 52 94.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48760011 + NM_001167992 PQBP1 1 6.62 9.15 72 2.15 76.49 30 5.92 Yes 17 0.12 No 0 0 No -29 0.84 Yes 41 61.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 77676480 - NM_025078 PQLC1 1 0.62 0.36 19 10.12 91.66 24 5.48 No 11 0.38 No 0 0 No -23 0.74 Yes 47 75.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 77685054 - NM_025078 PQLC1 1 0.51 0.13 7 7.88 79.99 10 5.72 Yes 37 0.13 No 26 0.48 Yes -26 0.71 Yes 44 72 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr18 77690312 - NM_025078 PQLC1 1 7.9 1.86 63 10.96 93.23 22 5.4 No 9 0.87 Yes 21 0.65 Yes -21 0.82 Yes 49 86.85 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 77690312 - NM_025078 PQLC1 1 8.42 1.94 60 10.96 93.23 22 5.4 No 9 0.87 Yes 21 0.65 Yes -21 0.82 Yes 49 86.85 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 77695768 - NM_025078 PQLC1 1 2.72 0.68 33 -0.43 59.74 65 8.51 Yes 16 1.71 Yes 0 0 No -28 0.79 Yes 14 9.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 77707342 - NM_025078 PQLC1 1 0.39 0.26 17 10.64 91.75 20 4.87 No 7 1.58 Yes 23 0.77 Yes -23 0.71 Yes 51 79.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 77709637 - NM_025078 PQLC1 1 0.53 0.38 20 5.27 86.67 26 5.1 No 58 0.72 No 25 0.9 Yes -25 0.75 Yes 45 56.55 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr18 77709656 - NM_025078 PQLC1 1 1.74 1.29 48 2.11 0 29 5.92 Yes 59 0.72 No 28 0.56 Yes -28 0.46 No 42 75.99 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr18 77709660 - NM_025078 PQLC1 1 0.29 0.19 11 1.07 83.78 25 5.57 Yes 35 0.73 No 28 0.56 Yes -24 0.48 No 46 77.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr1 19650247 + NR_109848 PQLC2 1 1.05 0.14 9 7.95 87.22 40 6.66 Yes 52 0.18 No 0 0 No -39 0.87 Yes 31 90.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 19652019 + NR_109848 PQLC2 1 19.12 2.5 62 7.98 86.34 36 6.29 Yes 23 -1.66 No 27 0.63 Yes -25 0.82 Yes 45 84.37 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 19654064 + NR_109848 PQLC2 1 10.07 1.33 53 6.37 79.95 83 9.79 Yes 70 2.48 Yes 28 0.36 Yes -42 0.38 No 28 73.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 8215346 - NM_001080826 PRAG1 1 0.96 0.58 30 8.56 79.03 27 6.4 Yes 14 0.82 Yes 0 0 No -26 0.85 Yes 44 82.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 8232426 - NM_001080826 PRAG1 1 0.42 0.29 13 6.25 85.13 23 4.47 No 53 -3.66 No 0 0 No -22 0.84 Yes 48 89.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 8235447 - NM_001080826 PRAG1 1 0.76 0.54 28 5.49 81.36 25 7.62 Yes 12 1.53 Yes 0 0 No -24 0.91 Yes 46 94.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91509952 - NM_001267580 PRC1 1 0.78 0.32 16 8.39 91.43 18 4.79 No 5 1.1 Yes 0 0 No -25 0.46 No 45 50.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91512348 - NM_001267580 PRC1 1 0.7 0.28 17 3.47 85.58 28 5.87 Yes 15 1.26 Yes 0 0 No -27 0.85 Yes 43 85.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91512351 - NM_001267580 PRC1 1 7.86 2.99 67 6.84 84.48 25 5.67 Yes 12 1.27 Yes 24 0.89 Yes -24 0.87 Yes 46 85.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 91512850 - NM_001267580 PRC1 1 0.07 0.13 8 3.15 0 34 6.77 Yes 68 0.42 No 0 0 No -29 0.84 Yes 41 95.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 91523610 - NM_001267580 PRC1 1 0.07 0.1 7 -1.56 0 13 4.36 No 17 0.81 Yes 0 0 No -29 0.74 Yes 40 78.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91524344 - NM_001267580 PRC1 1 0.27 0.46 23 8.05 85.64 28 4.88 No 15 0.86 Yes 0 0 No -27 0.9 Yes 43 93.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91524892 - NM_001267580 PRC1 1 0.25 0.25 14 0.26 0 12 4.08 No 13 0.91 Yes 0 0 No -25 0.54 No 44 51.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 156752077 + NM_005973 PRCC 1 0.8 0.88 37 4.14 0 27 5.66 Yes 14 1.09 Yes 0 0 No -26 0.84 Yes 44 82.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156760858 + NM_005973 PRCC 1 2.65 4.72 70 12.29 86.38 19 6.63 Yes 6 1.45 Yes 18 0.56 Yes -18 0.64 No 52 77.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 156761456 + NM_005973 PRCC 1 0.05 0.1 7 7.5 73.91 29 6.48 Yes 61 1.44 Yes 34 0.81 Yes -28 0.88 Yes 42 92.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 156761521 + NM_005973 PRCC 1 0.07 0.13 7 5 84.1 27 3.89 No 55 0.81 Yes 0 0 No -24 0.65 No 46 80.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 156765586 + NM_005973 PRCC 1 0.24 0.64 34 8.87 77.35 39 5.65 Yes 29 0.26 No 19 0.18 Yes -41 0.31 No 41 45.96 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 156767070 + NM_005973 PRCC 1 0.19 0.53 30 -0.05 77.03 29 7.77 Yes 16 0.61 No 0 0 No -28 0.92 Yes 42 92.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 82561112 - NM_199418 PRCP 1 0.13 0.13 8 -2.44 74.34 60 9.05 Yes 7 0.52 No 0 0 No -55 0.35 No 23 51.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 106538171 + NM_001198 PRDM1 1 0.27 0.4 15 2.23 66.87 58 6.04 Yes 11 0.89 Yes 0 0 No -31 0.53 No 39 37.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 129782103 - NM_199438 PRDM10 1 3.49 0.57 33 4.2 81.44 16 5.16 No 56 0.31 No 0 0 No -59 0.45 No 16 55.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 43221879 - NR_104260 PRDM15 1 0.75 0.25 17 0.04 0 36 8.54 Yes 74 0.35 No 0 0 No -34 0.57 No 36 72.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 43248638 - NR_104260 PRDM15 1 0.98 0.29 18 5.49 83.01 21 5.2 No 74 0.12 No 20 0.63 Yes -20 0.64 No 50 84.17 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr21 43248656 - NR_104260 PRDM15 1 2.2 0.65 34 2.64 0 14 4.13 No 56 0.11 No 20 0.63 Yes -19 0.7 Yes 51 43 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr21 43254674 - NR_104260 PRDM15 1 22.46 6.35 70 13.07 80.56 31 6.38 Yes 18 1.01 Yes 30 0.92 Yes -30 0.82 Yes 40 86.07 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 43256699 - NR_104260 PRDM15 1 2.17 0.68 35 4.17 81.74 27 4.92 No 44 1.05 Yes 26 0.88 Yes -26 0.9 Yes 44 74.95 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 43267295 - NR_104260 PRDM15 1 2.31 0.43 27 0.94 0 10 3.87 No 7 1.29 Yes 0 0 No -35 0.84 Yes 35 80.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 43270512 - NR_104260 PRDM15 1 0.5 0.11 7 4.93 80.97 31 4.87 No 34 1.18 Yes 0 0 No -24 0.62 No 40 72.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 43273026 - NR_104260 PRDM15 1 1.71 0.38 21 3.3 73.98 55 7.48 Yes 42 0.96 Yes 0 0 No -41 0.64 No 21 79.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 14043820 + NM_001135610 PRDM2 1 3.75 1.72 54 7.94 81.16 30 5.55 No 28 0.58 No 0 0 No -29 0.89 Yes 41 87.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 14045968 + NM_001135610 PRDM2 1 0.66 0.36 16 9.32 90.09 25 4.11 No 2 1.01 Yes 0 0 No -24 0.63 No 46 72.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 14058061 + NM_001135610 PRDM2 1 0.4 0.33 19 7.53 88.22 37 6.2 Yes 73 0.87 Yes 0 0 No -27 0.56 No 50 63.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 14058290 + NM_001135610 PRDM2 1 0.14 0.11 7 12 86.87 24 5.77 Yes 66 -2.47 No 0 0 No -23 0.86 Yes 47 84.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 14070958 + NM_001135610 PRDM2 1 1.91 1.31 43 6.91 85.78 22 5.03 No 9 0.28 No 0 0 No -28 0.85 Yes 42 93.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 14148143 + NM_001135610 PRDM2 1 4.41 0.29 15 5.98 85.02 29 7.26 Yes 16 1.94 Yes 0 0 No -28 0.74 Yes 42 89.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 108134925 - NM_012406 PRDM4 1 1.31 0.5 28 7.84 90.13 34 5.49 No 5 1.44 Yes 0 0 No -33 0.67 Yes 37 59.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 108138443 - NM_012406 PRDM4 1 0.46 0.17 11 -1.6 0 27 5.1 No 54 0.7 No 30 0.57 Yes -26 0.9 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 108138460 - NM_012406 PRDM4 1 3.16 1.08 43 3.4 70.89 50 7.42 Yes 37 0.7 No 30 0.4 Yes -45 0.43 No 25 59.09 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 108148638 - NM_012406 PRDM4 1 0.27 0.15 9 7.83 90.42 23 5.84 Yes 10 0.8 Yes 22 0.9 Yes -22 0.64 No 48 68.98 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 45977085 - NM_001202431 PRDX1 1 0.01 0.19 14 -21.25 0 27 5.45 No 14 0.1 No 0 0 No -26 0.92 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45979182 - NM_001202431 PRDX1 1 0.01 0.13 8 10.55 88.26 28 5.71 Yes 7 1.44 Yes 0 0 No -28 0.46 No 43 60.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45980270 - NM_001202431 PRDX1 1 0.02 0.53 25 4.79 84.78 24 4.16 No 64 1.33 Yes 0 0 No -23 0.8 Yes 47 50.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 12912078 - NM_005809 PRDX2 1 0.09 0.24 12 -1.26 0 10 4 No 13 1.7 Yes 0 0 No -25 0.9 Yes 45 83.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120928061 - NM_006793 PRDX3 1 0.01 0.14 8 -0.06 66.34 18 3.93 No 34 0.79 Yes 21 0.95 Yes -46 0.53 No 53 41.68 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 120928793 - NM_006793 PRDX3 1 0.06 0.51 25 3.31 70.57 20 4.05 No 40 -3.6 No 0 0 No -24 0.55 No 51 53.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 120928826 - NM_006793 PRDX3 1 0.15 1.32 51 -14.76 60.5 36 6 Yes 0 0.46 No 0 0 No -35 0.82 Yes 35 69.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 120929678 - NM_006793 PRDX3 1 0.27 2.35 55 3.96 72.26 24 4.92 No 61 2.26 Yes 0 0 No -23 0.67 Yes 47 55.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 120932958 - NM_006793 PRDX3 1 0.01 0.11 7 3.45 85.02 16 6.82 Yes 3 1.16 Yes 0 0 No -29 0.66 No 41 78.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 120933365 - NM_006793 PRDX3 1 0.02 0.15 10 9.94 86.29 23 5.39 No 35 1.35 Yes 0 0 No -47 0.81 Yes 23 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120937159 - NM_006793 PRDX3 1 0.03 0.24 12 3.97 84.41 25 6.24 Yes 12 1.54 Yes 0 0 No -24 0.88 Yes 46 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 23704118 + NM_006406 PRDX4 1 0.66 0.68 34 5.56 71.72 21 6.4 Yes 8 1.05 Yes 20 0.69 Yes -20 0.41 No 36 68.42 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chrX 23704392 + NM_006406 PRDX4 1 0.3 0.31 20 -0.97 0 20 6.91 Yes 49 1.02 Yes 28 0.63 Yes -23 0.33 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 64086117 + NM_012094 PRDX5 1 0.08 0.35 21 4.47 86.65 27 5.2 No 67 0.66 No 0 0 No -26 0.73 Yes 14 67.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 64088134 + NM_012094 PRDX5 1 0.02 0.18 11 -10.03 0 37 5.94 Yes 24 0.31 No 0 0 No -24 0.52 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64088481 + NM_012094 PRDX5 1 0.04 0.21 10 -7.31 78.08 28 6.63 Yes 15 2.18 Yes 0 0 No -27 0.93 Yes 43 94.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64089009 + NM_012094 PRDX5 1 0.16 1.43 50 6.12 77.9 22 7.28 Yes 9 1.2 Yes 0 0 No -21 0.89 Yes 49 93.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 173447671 + NM_004905 PRDX6 1 0.28 1.24 45 11.31 92.54 32 6.48 Yes 54 1.03 Yes 0 0 No -32 0.46 No 39 57.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 27355208 - NM_001330484 PREB 1 0.05 0.11 7 -1.6 64.24 22 5.1 No 65 1.22 Yes 0 0 No -21 0.92 Yes 49 91.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27355225 - NM_001330484 PREB 1 0.41 0.83 39 5.96 76.74 12 5.31 No 48 1.22 Yes 0 0 No -30 0.47 No 44 57.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176731293 + NM_013237 PRELID1 1 0.04 0.43 24 4.69 86.91 16 4.28 No 3 0.25 No 21 0.92 Yes -21 0.91 Yes 49 89.37 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 176731576 + NM_013237 PRELID1 1 0.18 1.76 61 1.02 73.81 22 5.97 Yes 46 -3.71 No 22 0.53 Yes -22 0.52 No 48 57.41 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 12422246 + NM_001142406 PRELID3A 1 1.15 0.19 12 8.59 82.61 25 5.2 No 45 0.75 No 24 0.93 Yes -57 0.72 Yes 13 68.18 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr6 105729727 - NM_002726 PREP 1 0.98 1.03 39 2.24 72.5 28 6.4 Yes 15 2 Yes 0 0 No -27 0.88 Yes 43 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 105764465 - NM_002726 PREP 1 0.26 0.24 13 8.82 87.15 39 7.18 Yes 26 1.39 Yes 0 0 No -38 0.48 No 32 71.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 105765550 - NM_002726 PREP 1 0.23 0.15 9 8.83 79.93 29 7.18 Yes 38 0.95 Yes 0 0 No -28 0.58 No 42 64.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 105770987 - NM_002726 PREP 1 27.02 20.68 72 10.69 92.98 26 5.46 No 52 0.16 No 25 0.88 Yes -25 0.48 No 45 65.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 105780089 - NM_002726 PREP 1 0.34 0.33 21 12.17 97.69 45 7 Yes 56 0.82 Yes 0 0 No -34 0.68 Yes 36 81.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 105824108 - NM_002726 PREP 1 0.12 0.11 7 8 92.65 26 5.65 Yes 36 0.27 No 0 0 No -29 0.36 No 45 42.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 44546201 - NM_001171617 PREPL 1 0.12 0.17 8 4.11 74.55 14 5.24 No 1 1.25 Yes 0 0 No -21 0.8 Yes 49 65.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 44547783 - NM_001171617 PREPL 1 0.28 0.44 24 7.14 82.08 31 5.48 No 18 0.69 No 23 0.7 Yes -30 0.62 No 47 40.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 44553921 - NM_001171617 PREPL 1 0.15 0.17 11 5.98 80.35 21 5.72 Yes -1 1.22 Yes 0 0 No -20 0.87 Yes 50 91.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 44571088 - NM_001171617 PREPL 1 2.77 3.24 66 4.03 84.92 28 4.16 No 23 0.4 No 0 0 No -27 0.61 No 43 60.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 44586736 - NM_001171617 PREPL 1 1.54 0.14 9 2.58 71.94 26 5.74 Yes 4 1.55 Yes 0 0 No -26 0.68 Yes 44 65.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 44586890 - NM_001171617 PREPL 1 15.06 1.14 43 4.64 77.53 34 5.59 Yes 39 0.43 No 24 0.52 Yes -30 0.76 Yes 46 48.85 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 44587178 - NM_001171617 PREPL 1 6.67 0.53 27 11 85.32 34 5.93 Yes 46 0.75 No 33 0.78 Yes -31 0.47 No 37 74.09 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr20 47248897 - NM_020820 PREX1 1 0.12 0.15 10 3.9 89.84 11 5 No NA NA NA 0 0 No -18 0.5 No 52 46.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 47259025 - NM_020820 PREX1 1 0.05 0.11 8 -9.38 70.36 31 5.93 Yes 18 1.53 Yes 0 0 No -30 0.89 Yes 40 76.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47260801 - NM_020820 PREX1 1 0.08 0.18 13 6.38 86.39 17 5.57 Yes 4 0.24 No 0 0 No -31 0.72 Yes 39 63.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 47273712 - NM_020820 PREX1 1 0.1 0.18 9 4.74 82.57 22 4.7 No 41 1 Yes 0 0 No -54 0.51 No 17 80.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 47276686 - NM_020820 PREX1 1 0.08 0.11 8 1.94 65.34 42 6.4 Yes 40 0.24 No 0 0 No -24 0.33 No 29 37.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 47281108 - NM_020820 PREX1 1 0.14 0.22 14 9.58 84.39 24 5.38 No 58 1.16 Yes 0 0 No -24 0.46 No 47 70.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 47305365 - NM_020820 PREX1 1 0.96 1.43 51 6.18 81.27 67 8.29 Yes 54 -0.62 No 24 0.59 Yes -24 0.69 Yes 36 36.63 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr20 47307818 - NM_020820 PREX1 1 0.05 0.14 10 5.09 92.16 21 5 No 70 0.66 No 0 0 No -20 0.79 Yes 50 71.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47309263 - NM_020820 PREX1 1 0.04 0.11 7 7.29 90.65 23 4.44 No 73 1.93 Yes 0 0 No -23 0.85 Yes 47 68.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 47318743 - NM_020820 PREX1 1 0.07 0.15 10 10.86 88.27 24 4.56 No 20 1.79 Yes 0 0 No -32 0.8 Yes 47 86.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47351185 - NM_020820 PREX1 1 0.38 0.72 31 2.02 78.26 28 5.66 Yes 26 1.49 Yes 0 0 No -27 0.72 Yes 43 64.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 47351781 - NM_020820 PREX1 1 0.12 0.18 11 8.73 81.6 27 5.62 Yes 14 1.67 Yes 0 0 No -21 0.75 Yes 49 66.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 47354012 - NM_020820 PREX1 1 0.15 0.28 14 4.22 82.03 22 5.12 No 69 1.29 Yes 0 0 No -21 0.92 Yes 49 90.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47354035 - NM_020820 PREX1 1 0.43 0.71 31 5.36 66.77 49 7.42 Yes 46 1.31 Yes 0 0 No -33 0.44 No 22 75.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 47358689 - NM_020820 PREX1 1 0.1 0.15 8 3.99 81.51 25 4.35 No 35 1.31 Yes 0 0 No -24 0.73 Yes 46 64.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 47396048 - NM_020820 PREX1 1 0.4 0.31 18 8.15 89.16 24 4.01 No 58 0.65 No 0 0 No -23 0.74 Yes 47 70.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47438567 - NM_020820 PREX1 1 3.96 3.06 64 11.08 94 24 5.48 No 71 0.09 No 0 0 No -23 0.66 No 49 62.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 47440189 - NM_020820 PREX1 1 0.22 0.17 10 11.46 91.46 23 9.24 Yes 10 1.67 Yes 0 0 No -22 0.89 Yes 48 88.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 49034547 - NM_001307979 PRICKLE3 1 2.21 0.92 42 -1.42 0 11 2.9 No -2 0.6 No 28 0.84 Yes -10 0.71 Yes 55 45.03 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 57133913 - NM_000946 PRIM1 1 3.64 4.28 70 3.22 0 48 8.26 Yes 35 0.84 Yes 0 0 No -47 0.96 Yes 23 97.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57135619 - NM_000946 PRIM1 1 0.14 0.22 13 -6.05 0 33 5.77 Yes 0 1.51 Yes 23 0.74 Yes -32 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 57140631 - NM_000946 PRIM1 1 0.62 0.61 28 3.06 0 11 4.12 No 8 1.27 Yes 0 0 No -26 0.55 No 44 76.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 57187345 + NM_000947 PRIM2 1 0.2 0.26 18 5.12 84.41 26 4.31 No 24 1.16 Yes 0 0 No -26 0.69 Yes 44 60.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 57243048 + NM_000947 PRIM2 1 10.25 9.5 72 8.44 88.27 25 7.34 Yes 12 1.85 Yes 0 0 No -24 0.92 Yes 46 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 57404327 + NM_000947 PRIM2 1 0.19 0.19 12 7.86 90.64 26 4.41 No 13 1.94 Yes 0 0 No -19 0.69 Yes 51 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 57453298 + NM_000947 PRIM2 1 0.79 0.78 36 11.49 98.8 13 4.65 No 75 -2.22 No 25 0.56 Yes -25 0.47 No 45 50.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 185578238 + NM_001345891 PRIMPOL 1 12.19 3.08 66 2.37 78.51 33 6.78 Yes 20 0.98 Yes 29 0.78 Yes -32 0.89 Yes 38 95.11 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr4 185585377 + NM_001345891 PRIMPOL 1 4.7 1.25 48 6.31 83.89 17 4.9 No 4 1.1 Yes 0 0 No -23 0.44 No 47 49.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 185585921 + NM_001345891 PRIMPOL 1 0.5 0.17 12 3.83 90.38 26 6.08 Yes 13 -0.1 No 0 0 No -25 0.74 Yes 40 63.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 185593431 + NM_001345891 PRIMPOL 1 0.56 0.21 14 7.54 85.59 29 5.7 Yes 57 -2.23 No 0 0 No -21 0.56 No 44 64.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 185599706 + NM_001345891 PRIMPOL 1 0.9 0.21 13 8.49 95.08 35 6.24 Yes 22 1.05 Yes 0 0 No -34 0.92 Yes 36 96.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 185606565 + NM_001345891 PRIMPOL 1 1.14 0.32 17 3.92 74.71 31 6.2 Yes 42 0.79 Yes 23 0.67 Yes -26 0.55 No 44 65.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 185606565 + NM_001345891 PRIMPOL 1 16.42 4.47 71 3.92 74.71 31 6.2 Yes 42 0.79 Yes 23 0.67 Yes -26 0.55 No 44 65.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr4 185606759 + NM_001345891 PRIMPOL 1 1.29 0.38 21 2.99 88.11 33 5.56 Yes 71 -2.63 No 0 0 No -29 0.61 No 33 53.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 40762365 - NM_206907 PRKAA1 1 1.38 1.35 54 2.63 0 41 7.19 Yes 28 1.33 Yes 0 0 No -40 0.45 No 30 53.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 40762369 - NM_206907 PRKAA1 1 0.08 0.1 7 1.8 83 37 6.94 Yes 24 1.34 Yes 0 0 No -36 0.43 No 34 57.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 40771930 - NM_206907 PRKAA1 1 6.12 0.51 25 9.01 83.34 29 3.87 No 35 1.8 Yes 0 0 No -23 0.38 No 47 27.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 40777437 - NM_206907 PRKAA1 1 0.34 0.36 19 9.26 86.07 23 6.16 Yes 10 2.13 Yes 22 0.95 Yes -22 0.85 Yes 48 90.79 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 40780441 - NM_206907 PRKAA1 1 0.29 0.24 14 9.87 89.85 42 6.08 Yes 4 0.78 Yes 0 0 No -26 0.76 Yes 44 82.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 40786537 - NM_206907 PRKAA1 1 0.23 0.18 11 8.3 81.33 18 6.67 Yes 5 1.28 Yes 0 0 No -25 0.65 No 45 61.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 40796780 - NM_206907 PRKAA1 1 0.42 0.35 17 8.17 87.97 33 5.13 No 76 1.07 Yes 0 0 No -28 0.42 No 48 44.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 120109299 + NM_006253 PRKAB1 1 10.02 7.35 71 4.16 86.02 19 4.8 No 6 0.38 No 30 0.64 Yes -24 0.74 Yes 52 46.93 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 120116319 + NM_006253 PRKAB1 1 0.21 0.28 15 4.74 83.67 27 7.51 Yes 14 1.21 Yes 0 0 No -26 0.94 Yes 44 93.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120117237 + NM_006253 PRKAB1 1 0.42 0.51 26 6.24 73.31 33 8.04 Yes 20 0.47 No 0 0 No -33 0.27 No 37 41.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 146631217 - NM_005399 PRKAB2 1 1.03 0.21 11 1.73 0 40 5.98 Yes 60 0.54 No 0 0 No -32 0.6 No 38 67.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 146632413 - NM_005399 PRKAB2 1 28.97 6.25 71 7.65 80.95 16 5.6 Yes 3 1.21 Yes 26 0.81 Yes -33 0.52 No 48 47.76 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 14207501 - NM_002730 PRKACA 1 0.06 0.13 9 3.1 70.48 21 4.69 No 30 -2.86 No 0 0 No -20 0.95 Yes 50 89.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 84668447 + NM_001300915 PRKACB 1 0.21 0.15 10 9.83 87.22 34 5.74 Yes 28 0.51 No 0 0 No -26 0.81 Yes 44 72.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49398800 - NM_002733 PRKAG1 1 0.12 0.28 16 2.91 83.56 24 8.83 Yes 11 1.82 Yes 0 0 No -23 0.81 Yes 47 90.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49399094 - NM_002733 PRKAG1 1 0.04 0.13 9 -1.27 68.54 47 7.81 Yes 64 0.8 Yes 0 0 No -31 0.57 No 24 65.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49399175 - NM_002733 PRKAG1 1 0.23 0.64 29 -11.79 0 13 4.36 No 55 -3.95 No 21 0.59 Yes -41 0.72 Yes 18 41.94 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 49399376 - NM_002733 PRKAG1 1 0.83 1.57 53 10.22 92.11 31 5.6 Yes 30 1.25 Yes 22 0.57 Yes -22 0.3 No 52 39.89 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 49399634 - NM_002733 PRKAG1 1 0.06 0.1 7 -5.79 64.1 22 6 Yes 9 1.62 Yes 19 0.82 Yes -21 0.78 Yes 49 67.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 49399679 - NM_002733 PRKAG1 1 0.07 0.17 8 -4.77 73.04 46 6.71 Yes 57 -2.77 No 22 0.88 Yes -30 0.63 No 40 53.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 49402383 - NM_002733 PRKAG1 1 0.49 0.9 36 8.31 85 34 5.9 Yes 73 -4.24 No 33 0.62 Yes -33 0.68 Yes 37 68.55 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 49404217 - NM_002733 PRKAG1 1 0.08 0.13 7 10.33 84.99 28 5.2 No 15 1.71 Yes 0 0 No -27 0.69 Yes 43 78.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49410623 - NM_002733 PRKAG1 1 0.49 0.49 27 7.47 85.12 25 7.04 Yes 12 0.63 No 24 0.89 Yes -24 0.74 Yes 46 84.27 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr7 151254546 - NM_024429 PRKAG2 1 0.41 0.18 11 6.56 80.44 32 5.82 Yes 75 0.7 No 0 0 No -31 0.58 No 39 77.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 151263786 - NM_024429 PRKAG2 1 0.72 0.32 19 9.95 80.81 37 5.36 No 24 1.06 Yes 0 0 No -36 0.87 Yes 34 94.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151292538 - NM_024429 PRKAG2 1 39.27 4.93 71 5.56 91.04 28 7.48 Yes 15 1.96 Yes 24 0.86 Yes -27 0.7 Yes 43 80.55 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr7 151305615 - NM_024429 PRKAG2 1 0.84 0.11 7 3.48 78.91 34 5.8 Yes 21 1.49 Yes 0 0 No -29 0.71 Yes 41 76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 151328557 - NM_024429 PRKAG2 1 1.07 0.17 11 12.28 94.92 49 9.81 Yes 65 1.99 Yes 0 0 No -48 0.96 Yes 22 97.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 66519854 + NM_001276290 PRKAR1A 1 0.04 0.15 9 6.15 83 40 7.57 Yes -4 1.22 Yes 24 0.84 Yes -24 0.85 Yes 46 86.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 66524987 + NM_001276290 PRKAR1A 1 0.06 0.46 18 -6.95 0 25 5.36 No 43 0.86 Yes 21 0.56 Yes -55 0.27 No 15 47.54 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr7 736740 - NM_002735 PRKAR1B 1 0.36 0.26 15 6.45 81.83 32 5.83 Yes NA NA NA 27 0.38 Yes -27 0.58 No 53 38.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 739990 - NM_002735 PRKAR1B 1 0.88 0.61 32 8.15 92.65 23 6.16 Yes 10 0.94 Yes 0 0 No -22 0.78 Yes 48 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 745357 - NM_002735 PRKAR1B 1 1.09 0.71 41 9.86 86.69 25 6.53 Yes 12 1.14 Yes 0 0 No -24 0.95 Yes 46 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48785374 - NM_004157 PRKAR2A 1 0.26 0.19 11 8.96 90.16 25 5.39 No 12 1.35 Yes 24 0.95 Yes -24 0.89 Yes 46 90.57 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 48789506 - NM_004157 PRKAR2A 1 0.29 0.21 13 6.62 80.86 32 6.71 Yes 53 1.37 Yes 0 0 No -31 0.88 Yes 39 80.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48789546 - NM_004157 PRKAR2A 1 3.07 2.18 60 6.12 90.61 26 7.22 Yes 13 1.36 Yes 0 0 No -25 0.91 Yes 45 94.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48820520 - NM_004157 PRKAR2A 1 0.18 0.14 10 -4.3 0 15 3.8 No 52 0.96 Yes 0 0 No -41 0.7 Yes 29 65.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 48876719 - NM_004157 PRKAR2A 1 0.88 0.5 27 8.83 88.27 20 5.34 No 7 0.86 Yes 0 0 No -28 0.47 No 42 52.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23850619 + NM_212535 PRKCB 1 0.31 0.65 32 10.01 98.73 22 5.63 Yes 69 -4.43 No 0 0 No -25 0.73 Yes 45 81.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23851060 + NM_212535 PRKCB 1 0.09 0.17 9 7.2 87.08 23 4.29 No 41 1.09 Yes 0 0 No -18 0.82 Yes 52 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23851202 + NM_212535 PRKCB 1 0.2 0.33 17 7.03 78.99 32 3.94 No 19 0.23 No 0 0 No -31 0.91 Yes 39 93.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23880434 + NM_212535 PRKCB 1 0.15 0.33 19 7.53 85.78 21 7.3 Yes 62 0.64 No 20 0.6 Yes -20 0.49 No 50 47.66 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 23894093 + NM_212535 PRKCB 1 0.06 0.11 7 10.07 88.27 43 9.46 Yes 62 1.02 Yes 0 0 No -31 0.42 No 39 60.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23904284 + NM_212535 PRKCB 1 0.99 1.71 47 12.1 98.73 30 4.45 No 32 0.73 No 0 0 No -25 0.7 Yes 45 75.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23935546 + NM_212535 PRKCB 1 0.1 0.21 13 10.67 77.64 20 6.57 Yes 7 1.69 Yes 0 0 No -26 0.85 Yes 44 89.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23955209 + NM_212535 PRKCB 1 0.06 0.14 10 3.82 63.05 28 6.94 Yes 73 2.11 Yes 0 0 No -35 0.52 No 43 56.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23974461 + NM_212535 PRKCB 1 0.12 0.28 13 7.24 81.94 34 7.14 Yes 35 0.45 No 0 0 No -33 0.41 No 34 58.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23999829 + NM_212535 PRKCB 1 0.07 0.13 9 -11.42 0 82 6.4 Yes 69 2.29 Yes 0 0 No -26 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 24001174 + NM_212535 PRKCB 1 0.08 0.25 14 8.64 75.88 29 6.53 Yes 16 1.74 Yes 0 0 No -28 0.83 Yes 42 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 24026598 + NM_212535 PRKCB 1 0.49 1.56 46 12.3 92.97 25 5.39 No 12 0.96 Yes 0 0 No -24 0.88 Yes 46 87.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 24050377 + NM_212535 PRKCB 1 0.03 0.11 7 -0.2 69.17 23 5.21 No 46 -4.48 No 0 0 No -25 0.87 Yes 45 89.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 24060402 + NM_212535 PRKCB 1 0.05 0.18 11 12.15 95.65 56 7.92 Yes 43 1.01 Yes 0 0 No -45 0.76 Yes 25 79.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 24104115 + NM_212535 PRKCB 1 0.06 0.21 12 -3.01 0 32 6.71 Yes 19 0.9 Yes 0 0 No -31 0.89 Yes 39 92.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 24122394 + NM_212535 PRKCB 1 0.16 0.53 25 8.37 83.97 39 5.8 Yes -3 -2.13 No 34 0.19 Yes -34 0.72 Yes 36 74.84 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 24124257 + NM_212535 PRKCB 1 0.03 0.11 8 -12.67 0 51 7.27 Yes 65 0.97 Yes 34 0.71 Yes -25 0.53 No 20 38.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 53207508 + NM_001316327 PRKCD 1 3.97 2.36 38 9.04 84.73 13 6.02 Yes 71 1.15 Yes 26 0.81 Yes -30 0.65 No 40 70.54 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 53207518 + NM_001316327 PRKCD 1 0.62 0.4 18 5.35 0 13 4.36 No 70 -1.07 No 26 0.81 Yes -22 0.54 No 48 56.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 53207542 + NM_001316327 PRKCD 1 0.36 0.22 13 4.7 84.15 27 4.8 No 2 0.41 No 26 0.81 Yes -26 0.65 No 44 43.36 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 53213268 + NM_001316327 PRKCD 1 0.12 0.24 16 3.42 0 19 4.24 No 76 -1.53 No 0 0 No -18 0.78 Yes 52 89.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53213594 + NM_001316327 PRKCD 1 0.05 0.1 7 -8.42 68.09 29 6.96 Yes NA NA NA 0 0 No -28 0.61 No 42 70.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 53219621 + NM_001316327 PRKCD 1 0.04 0.14 8 -5.74 71.39 37 7.64 Yes 24 2.28 Yes 0 0 No -36 0.85 Yes 34 90.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53219949 + NM_001316327 PRKCD 1 0.06 0.21 12 -7.78 0 17 3.99 No 31 -0.35 No 0 0 No -30 0.92 Yes 40 84.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 45925079 + NM_005400 PRKCE 1 3.1 0.44 24 4.87 70.8 25 6.32 Yes 12 1.31 Yes 28 0.76 Yes -24 0.93 Yes 46 94.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 45969165 + NM_005400 PRKCE 1 1.04 0.18 10 12.47 95.17 33 6.08 Yes 67 0.87 Yes 0 0 No -30 0.83 Yes 40 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 46067518 + NM_005400 PRKCE 1 0.74 0.11 7 9.44 88.12 34 6.15 Yes 69 0.92 Yes 33 0.22 Yes -33 0.86 Yes 37 81.47 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 46072533 + NM_005400 PRKCE 1 30.5 2.74 61 9.84 85.86 24 5.48 No 11 1.08 Yes 23 0.89 Yes -23 0.77 Yes 47 87.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 46087243 + NM_005400 PRKCE 1 1.8 0.18 11 10.35 81.83 22 6.39 Yes 9 1.16 Yes 0 0 No -25 0.64 No 45 76.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 46126540 + NM_005400 PRKCE 1 0.95 0.1 7 10.78 88.27 32 6.88 Yes 52 0.74 No 0 0 No -31 0.57 No 39 64.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 46127971 + NM_005400 PRKCE 1 1.29 0.11 7 4.91 86.68 58 8.89 Yes 59 0.92 Yes 0 0 No -22 0.38 No 44 51.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 46217226 + NM_005400 PRKCE 1 1.7 0.22 14 6.52 89.1 26 5.78 Yes 73 0.3 No 0 0 No -26 0.53 No 45 37.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 46237822 + NM_005400 PRKCE 1 3.02 0.22 15 8.99 88.88 21 4.9 No 8 0.06 No 20 0.81 Yes -20 0.8 Yes 50 62.4 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 46251465 + NM_005400 PRKCE 1 2.07 0.38 17 11.38 95.65 30 4.03 No 46 0.76 No 0 0 No -26 0.52 No 44 47.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 169976542 + NM_002740 PRKCI 1 0.44 0.18 11 6.99 89.11 25 6.04 Yes 12 1.1 Yes 0 0 No -24 0.65 No 46 66.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 170003557 + NM_002740 PRKCI 1 1.5 0.65 36 1.34 0 31 6.22 Yes 18 0.57 No 0 0 No -38 0.71 Yes 32 70.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 170006133 + NM_002740 PRKCI 1 0.35 0.17 9 9.81 96.61 35 8.2 Yes 22 0.39 No 0 0 No -21 0.73 Yes 49 51.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 170008630 + NM_002740 PRKCI 1 0.32 0.15 8 9.67 87.37 21 6.39 Yes 66 0.93 Yes 0 0 No -35 0.7 Yes 35 71.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11547354 + NM_001289102 PRKCSH 1 0.05 0.26 16 8.59 83.93 26 5.66 Yes 25 1.23 Yes 25 0.84 Yes -25 0.76 Yes 45 87.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11551883 + NM_001289102 PRKCSH 1 0.2 0.88 40 9.93 83.91 27 5.56 Yes 27 1.35 Yes 0 0 No -26 0.94 Yes 44 97.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11552026 + NM_001289102 PRKCSH 1 0.06 0.25 13 -7.21 0 13 4.36 No 0 0.95 Yes 32 0.25 Yes -12 0.62 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 11553201 + NM_001289102 PRKCSH 1 0.03 0.11 7 -13.7 0 18 6.08 Yes 44 -1.57 No 27 0.47 Yes -30 0.63 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 11553202 + NM_001289102 PRKCSH 1 0.04 0.17 10 -12.1 0 9 6.13 Yes 45 -1.58 No 27 0.47 Yes -31 0.62 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 11556208 + NM_001289102 PRKCSH 1 0.12 0.63 30 -2.01 0 27 5.39 No 14 0.52 No 0 0 No -26 0.88 Yes 44 87.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 11557062 + NM_001289102 PRKCSH 1 0.81 3.04 68 5.88 81.08 28 5.62 Yes -2 1.8 Yes 26 0.6 Yes -27 0.88 Yes 43 79.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11557326 + NM_001289102 PRKCSH 1 0.03 0.15 7 7.39 87.14 23 5.37 No 10 0.5 No 0 0 No -22 0.95 Yes 48 93.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 11558507 + NM_001289102 PRKCSH 1 142.91 100.79 72 7.23 84.27 19 5.92 Yes 6 2.4 Yes 22 0.93 Yes -22 0.92 Yes 48 84.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11558510 + NM_001289102 PRKCSH 1 0.75 0.49 29 -9.03 73.7 22 6.14 Yes 9 2.4 Yes 22 0.79 Yes -25 0.85 Yes 45 81.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 11559044 + NM_001289102 PRKCSH 1 0.07 0.25 16 -0.15 0 11 4.12 No 16 2.37 Yes 0 0 No -28 0.9 Yes 42 88.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11560378 + NM_001289102 PRKCSH 1 0.12 0.33 19 6.04 87.36 34 7.7 Yes 34 0.46 No 0 0 No -33 0.59 No 37 80.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 47181876 - NM_001079881 PRKD2 1 0.09 0.11 7 -6.77 58.34 33 6.45 Yes 20 1.15 Yes 0 0 No -32 0.74 Yes 38 62.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 47188779 - NM_001079881 PRKD2 1 0.12 0.25 11 15.22 89.3 83 8.89 Yes 46 1.61 Yes 0 0 No -58 0.71 Yes 12 77.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47217178 - NM_001079881 PRKD2 1 0.37 0.46 25 7.29 79.95 54 6.68 Yes 14 0.32 No 0 0 No -26 0.53 No 49 35.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 47217223 - NM_001079881 PRKD2 1 0.21 0.25 16 -0.03 66.67 30 6 Yes 61 1.28 Yes 0 0 No -29 0.76 Yes 41 46.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 47217550 - NM_001079881 PRKD2 1 1.08 1.33 43 9.4 82.95 29 5.39 No 12 0.65 No 0 0 No -28 0.82 Yes 42 72.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 47219478 - NM_001079881 PRKD2 1 2.47 0.57 18 7.91 87.53 42 6.93 Yes -4 -0.19 No 23 0.14 Yes -23 0.38 No 31 32.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 37484803 - NM_005813 PRKD3 1 0.24 0.14 8 3.06 0 38 8.06 Yes 25 2 Yes 0 0 No -38 0.86 Yes 32 89.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 37490326 - NM_005813 PRKD3 1 0.3 0.26 15 11.44 84.36 24 5.48 No 70 -4.11 No 0 0 No -23 0.71 Yes 47 79.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37495516 - NM_005813 PRKD3 1 0.39 0.22 14 5.07 81.49 42 7.55 Yes 54 -4.45 No 24 0.41 Yes -30 0.43 No 36 41.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 37499573 - NM_005813 PRKD3 1 0.73 0.26 13 1.32 70.65 30 7.09 Yes 17 1.11 Yes 26 0.82 Yes -29 0.61 No 41 75.51 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 37502668 - NM_005813 PRKD3 1 0.27 0.14 9 9.35 82.66 25 7.45 Yes 63 0.58 No 0 0 No -24 0.93 Yes 46 88.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37513498 - NM_005813 PRKD3 1 0.64 0.51 24 4.97 78.78 25 3.4 No 35 1.15 Yes 0 0 No -24 0.84 Yes 33 68.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 37515014 - NM_005813 PRKD3 1 0.71 0.56 30 9.69 92.07 46 6.57 Yes 54 -2.85 No 0 0 No -30 0.57 No 40 81.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 37516561 - NM_005813 PRKD3 1 0.19 0.11 8 7.24 89.75 35 5.54 No 74 -5.34 No 0 0 No -26 0.46 No 44 34.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37518137 - NM_005813 PRKD3 1 0.12 0.14 7 -0.75 0 10 3.81 No 13 1.19 Yes 24 0.39 Yes -26 0.51 No 32 43.32 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 37520120 - NM_005813 PRKD3 1 4.43 3.06 57 9.86 98.76 32 6.86 Yes 10 0.53 No 0 0 No -31 0.62 No 39 60.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 48691156 - NM_001081640 PRKDC 1 0.04 0.15 11 5.2 79.26 35 6.4 Yes 22 0.5 No 0 0 No -34 0.89 Yes 36 78.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 48695153 - NM_001081640 PRKDC 1 0.03 0.1 7 -4.56 0 11 4 No 72 1.37 Yes 0 0 No -30 0.6 No 40 62.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48699903 - NM_001081640 PRKDC 1 0.05 0.1 7 10.29 86.67 35 6.05 Yes 38 1.28 Yes 0 0 No -34 0.69 Yes 36 36.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 48707039 - NM_001081640 PRKDC 1 0.05 0.17 9 9.07 82.06 27 5.74 Yes 33 0.6 No 0 0 No -26 0.44 No 44 44.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 48707076 - NM_001081640 PRKDC 1 0.06 0.17 10 -2.66 0 16 3.84 No 63 0.97 Yes 21 0.68 Yes -15 0.55 No 55 47.54 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 48710944 - NM_001081640 PRKDC 1 0.4 0.75 33 4.81 87.47 20 4.89 No 35 1.81 Yes 0 0 No -19 0.41 No 23 56.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48711969 - NM_001081640 PRKDC 1 0.21 0.46 24 5.18 69.97 17 5.14 No 64 1.01 Yes 27 0.78 Yes -20 0.71 Yes 50 83.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 48727037 - NM_001081640 PRKDC 1 0.04 0.1 7 -3.21 0 16 3.87 No 43 1.52 Yes 0 0 No -32 0.67 Yes 38 66.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 48751811 - NM_001081640 PRKDC 1 22.99 51.81 72 4.61 77.63 30 5.77 Yes 9 1.23 Yes 24 0.81 Yes -29 0.85 Yes 41 76.38 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 48755305 - NM_001081640 PRKDC 1 0.08 0.19 12 6.45 88.81 23 7.28 Yes 10 1.06 Yes 0 0 No -22 0.86 Yes 48 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48755723 - NM_001081640 PRKDC 1 0.29 0.75 40 10.12 96.1 47 7.28 Yes 34 0.66 No 0 0 No -46 0.93 Yes 24 93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 48766617 - NM_001081640 PRKDC 1 0.05 0.13 7 9.33 85.47 13 5.92 Yes 58 1.68 Yes 0 0 No -32 0.54 No 42 52.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48771542 - NM_001081640 PRKDC 1 1.74 4.42 69 -2.9 0 12 3.07 No 32 1.42 Yes 0 0 No -44 0.88 Yes 26 93.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48771545 - NM_001081640 PRKDC 1 0.04 0.11 8 -10.17 71.22 42 7.82 Yes 29 1.43 Yes 0 0 No -41 0.88 Yes 29 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48797072 - NM_001081640 PRKDC 1 0.19 0.53 22 2.47 70.9 32 7.6 Yes 19 1.61 Yes 0 0 No -31 0.82 Yes 39 83.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48811135 - NM_001081640 PRKDC 1 0.07 0.22 10 -0.59 76.53 46 4.91 No 33 0.03 No 26 0.24 Yes -45 0.52 No 34 62.98 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 48811175 - NM_001081640 PRKDC 1 0.06 0.15 9 0.54 67.66 46 4.38 No 46 0.66 No 0 0 No -25 0.67 Yes 45 53.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 48812687 - NM_001081640 PRKDC 1 0.12 0.38 18 7.67 81.08 18 5.16 No 65 0.89 Yes 0 0 No -17 0.54 No 47 51.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48825557 - NM_001081640 PRKDC 1 0.06 0.22 12 4.8 90.29 25 4.69 No 69 0.04 No 0 0 No -24 0.57 No 51 56.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 48826656 - NM_001081640 PRKDC 1 0.04 0.13 7 -12.1 0 17 4.11 No 10 0.15 No 25 0.85 Yes -16 0.52 No 16 30.83 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 48842571 - NM_001081640 PRKDC 1 0.07 0.13 8 -13.79 80.04 17 7.31 Yes 4 1.12 Yes 0 0 No -30 0.46 No 40 57.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48854229 - NM_001081640 PRKDC 1 0.12 0.21 15 7.04 80.78 21 7.19 Yes 8 0.6 No 0 0 No -20 0.78 Yes 50 93.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 48866474 - NM_001081640 PRKDC 1 0.24 0.54 28 3.94 0 9 3.87 No 9 0.95 Yes 0 0 No -30 0.73 Yes 40 72.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48866998 - NM_001081640 PRKDC 1 0.27 0.58 32 -0.22 0 12 4.24 No 13 1.34 Yes 0 0 No -25 0.6 No 33 61.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48868250 - NM_001081640 PRKDC 1 0.09 0.22 12 9.29 95.2 27 7.71 Yes 14 1.18 Yes 0 0 No -26 0.81 Yes 44 92.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48869775 - NM_001081640 PRKDC 1 0.04 0.13 8 7.27 78.08 23 5.28 No 72 1.21 Yes 0 0 No -22 0.8 Yes 48 79.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48869775 - NM_001081640 PRKDC 1 0.26 0.67 36 7.27 78.08 23 5.28 No 72 1.21 Yes 0 0 No -22 0.8 Yes 48 79.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48869974 - NM_001081640 PRKDC 1 0.06 0.14 9 -3.04 0 15 4.36 No 32 1.17 Yes 0 0 No -45 0.67 Yes 25 71.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48871708 - NM_001081640 PRKDC 1 0.06 0.1 7 -8.46 60.26 40 8.11 Yes 67 0.35 No 0 0 No -40 0.77 Yes 30 85.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 3526981 - NM_005044 PRKX 1 0.36 0.24 15 -1.1 0 14 3.87 No 23 0.9 Yes 0 0 No -35 0.96 Yes 35 98.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 3529376 - NM_005044 PRKX 1 70.91 39.32 72 6.57 82.09 52 7.35 Yes 39 1.4 Yes 27 0.77 Yes -27 0.76 Yes 43 60.32 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chrX 3550509 - NM_005044 PRKX 1 0.17 0.22 10 5.42 80.88 37 6.98 Yes 24 1.09 Yes 0 0 No -36 0.52 No 34 60.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 3552288 - NM_005044 PRKX 1 0.17 0.22 11 9.45 87.79 25 7.09 Yes 72 1.29 Yes 0 0 No -24 0.57 No 46 62.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 3568175 - NM_005044 PRKX 1 0.11 0.11 7 3.4 0 47 8.49 Yes 34 1.13 Yes 0 0 No -41 0.72 Yes 29 87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 3626113 - NM_005044 PRKX 1 0.2 0.15 8 8.87 91.64 18 5.97 Yes 5 1.71 Yes 0 0 No -25 0.88 Yes 45 73.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 35086438 - NM_000949 PRLR 1 1.36 0.11 7 3.19 0 32 5.83 Yes 19 0.84 Yes 0 0 No -31 0.94 Yes 39 94.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50183745 + NR_033397 PRMT1 1 1.06 0.13 9 -19.26 0 31 6.49 Yes 18 1.65 Yes 0 0 No -30 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 50184327 + NR_033397 PRMT1 1 0.04 0.47 27 8.92 88.27 24 8.05 Yes 47 0.95 Yes 0 0 No -26 0.85 Yes 44 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50185168 + NR_033397 PRMT1 1 0.01 0.15 11 -15.33 0 32 7.75 Yes 19 1.48 Yes 0 0 No -31 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 50185169 + NR_033397 PRMT1 1 0.06 0.76 35 -8.04 75.78 33 7.81 Yes 20 1.48 Yes 0 0 No -32 0.95 Yes 38 95.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50185238 + NR_033397 PRMT1 1 0.02 0.26 13 5.18 73.74 39 5.35 No 5 1.16 Yes 0 0 No -38 0.78 Yes 32 84.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50188220 + NR_033397 PRMT1 1 0.4 2.99 69 3.05 72.49 19 6.56 Yes 55 1.86 Yes 0 0 No -27 0.55 No 52 43.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 50188793 + NR_033397 PRMT1 1 0.01 0.1 7 -0.29 81.44 48 8 Yes 35 1.63 Yes 0 0 No -45 0.65 No 23 90.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 50189352 + NR_033397 PRMT1 1 0.01 0.14 10 -10.11 69.93 15 5.83 Yes 2 0.15 No 0 0 No -27 0.79 Yes 43 73.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 50190186 + NR_033397 PRMT1 1 0.16 1.71 46 5.57 77.99 23 5.37 No 10 1.2 Yes 0 0 No -22 0.86 Yes 48 87.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50190189 + NR_033397 PRMT1 1 0.12 1.29 47 3.21 81.72 26 5.64 Yes 13 1.19 Yes 0 0 No -25 0.86 Yes 45 83.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50190782 + NR_033397 PRMT1 1 0.01 0.11 7 9.62 82.4 32 6.46 Yes 19 0.27 No 0 0 No -27 0.73 Yes 39 65.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 50191348 + NR_033397 PRMT1 1 0.01 0.11 7 3.71 70.89 13 5.39 No 0 0.15 No 0 0 No -22 0.85 Yes 48 64.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 48056804 + NM_206962 PRMT2 1 11.76 1.11 43 5.4 77.36 35 6.16 Yes 22 0.89 Yes 37 0.77 Yes -34 0.71 Yes 36 74.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 48056804 + NM_206962 PRMT2 1 3.08 0.39 21 5.4 77.36 35 6.16 Yes 22 0.89 Yes 37 0.77 Yes -34 0.71 Yes 36 74.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 48063443 + NM_206962 PRMT2 1 2.5 2.06 62 -0.46 75.7 21 6.4 Yes 8 1.77 Yes 23 0.82 Yes -20 0.87 Yes 50 91.97 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 48064222 + NM_206962 PRMT2 1 0.32 0.25 13 3.96 0 22 7.81 Yes 32 1.56 Yes 25 0.93 Yes -32 0.92 Yes 38 96.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 48068435 + NM_206962 PRMT2 1 0.12 0.15 9 7.28 84.33 18 4.69 No 72 0.82 Yes 0 0 No -23 0.55 No 47 45.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 48069424 + NM_206962 PRMT2 1 0.33 0.35 22 3.94 79.79 32 9.41 Yes 19 1.61 Yes 31 0.81 Yes -31 0.81 Yes 35 73.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 48072629 + NM_206962 PRMT2 1 0.49 0.22 11 7.79 94.82 21 5.69 Yes 8 0.6 No 0 0 No -31 0.51 No 46 52.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 48072756 + NM_206962 PRMT2 1 5.66 2.51 62 4.01 68.65 32 3.9 No 5 0.89 Yes 24 0.88 Yes -29 0.5 No 39 54.5 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 48073602 + NM_206962 PRMT2 1 1.6 0.72 36 5.99 93.5 24 4.99 No 64 1.01 Yes 0 0 No -23 0.96 Yes 47 97.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 48077969 + NM_206962 PRMT2 1 0.53 0.25 14 8.46 84.93 40 5.58 Yes 32 -1.61 No 0 0 No -27 0.34 No 43 50.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 20415336 + NM_001145166 PRMT3 1 0.9 0.57 30 5.95 87.5 34 4.76 No 1 1.13 Yes 23 0.74 Yes -33 0.49 No 37 43.14 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 20425805 + NM_001145166 PRMT3 1 1.37 0.81 35 3.01 0 53 7.55 Yes 40 1.01 Yes 0 0 No -52 0.81 Yes 18 89.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 20426423 + NM_001145166 PRMT3 1 4.07 2.69 63 8.3 85.73 28 4.14 No 15 0.51 No 0 0 No -22 0.73 Yes 48 52.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 20522485 + NM_001145166 PRMT3 1 0.19 0.15 10 9.29 85.94 29 6.4 Yes 50 0.39 No 0 0 No -22 0.41 No 46 44.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 23390263 - NM_001282955 PRMT5 1 0.9 3.15 66 5.24 86.32 29 6.02 Yes 16 1.75 Yes 31 0.91 Yes -34 0.58 No 36 66.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 23395418 - NM_001282955 PRMT5 1 0.07 0.18 10 2.87 75.96 24 4.9 No 58 2.09 Yes 0 0 No -23 0.44 No 52 66.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 23395774 - NM_001282955 PRMT5 1 0.12 0.33 18 -1.27 0 21 5.66 Yes 40 -1.45 No 29 0.85 Yes -20 0.77 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 23397373 - NM_001282955 PRMT5 1 2.37 0.14 9 1.26 75.36 15 5.57 Yes 22 1 Yes 22 0.2 Yes -34 0.67 Yes 36 90.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23397421 - NM_001282955 PRMT5 1 2933.94 207.79 72 -6.01 0 37 6.09 Yes 30 0.87 Yes 31 0.89 Yes -36 0.8 Yes 34 93.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 23397451 - NM_001282955 PRMT5 1 14.42 1.11 41 1.18 74.78 13 3.57 No 49 0.9 Yes 21 0.67 Yes -11 0.33 No 49 29.29 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 68362007 + NM_001290018 PRMT7 1 0.54 0.24 14 3.52 66.49 63 8.56 Yes 75 0.33 No 25 0.8 Yes -25 0.59 No 32 30.37 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 68385292 + NM_001290018 PRMT7 1 0.34 0.21 13 9.15 86.57 28 6.93 Yes 73 1.74 Yes 27 0.95 Yes -27 0.96 Yes 43 97.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 68385292 + NM_001290018 PRMT7 1 8.56 5.19 69 9.15 86.57 28 6.93 Yes 73 1.74 Yes 27 0.95 Yes -27 0.96 Yes 43 97.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 68387297 + NM_001290018 PRMT7 1 6.92 3.25 61 7.8 83.97 31 4.86 No 18 1.3 Yes 30 0.89 Yes -21 0.76 Yes 49 65 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 68388253 + NM_001290018 PRMT7 1 0.25 0.14 8 6.56 83.49 27 5.74 Yes 66 -3.79 No 0 0 No -26 0.78 Yes 40 83.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68389600 + NM_001290018 PRMT7 1 0.72 0.39 19 9.71 84.7 23 5.39 No 45 -1.21 No 27 0.47 Yes -22 0.77 Yes 48 81.66 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr16 68389932 + NM_001290018 PRMT7 1 0.5 0.32 16 8.99 84.48 21 5.78 Yes 39 1.49 Yes 0 0 No -27 0.56 No 49 63.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68390043 + NM_001290018 PRMT7 1 0.51 0.32 13 5.17 79.77 23 5.38 No 10 0.6 No 0 0 No -27 0.7 Yes 43 81.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 148585782 - NM_001304458 PRMT9 1 1.13 0.38 22 10.49 87.7 36 7.46 Yes 23 2.14 Yes 0 0 No -35 0.81 Yes 35 91.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 148591860 - NM_001304458 PRMT9 1 8.25 2.44 68 2.96 78.15 20 4.9 No 52 0.39 No 0 0 No -19 0.77 Yes 51 83.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 37623234 + NM_007198 PROSC 1 0.08 0.14 8 1.57 0 16 3.87 No 18 1.92 Yes 0 0 No -30 0.87 Yes 40 94.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 37623999 + NM_007198 PROSC 1 3.44 7.04 72 8.2 77.61 27 6.62 Yes 14 0.94 Yes 26 0.89 Yes -26 0.95 Yes 44 97.06 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 37625344 + NM_007198 PROSC 1 1.88 3.9 69 4.74 84.41 30 7.19 Yes 28 1.47 Yes 0 0 No -29 0.92 Yes 41 94.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 37632826 + NM_007198 PROSC 1 0.21 0.43 26 7.32 87.93 15 4.41 No 50 0.88 Yes 29 0.37 Yes -29 0.68 Yes 41 63.65 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 37632853 + NM_007198 PROSC 1 1 2.01 59 2.99 0 24 5.56 Yes 25 0.26 No 27 0.52 Yes -26 0.72 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr13 39585475 - NM_025138 PROSER1 1 1.04 1.31 45 9.79 91.97 19 5.52 No 6 1.12 Yes 28 0.47 Yes -25 0.44 No 45 59.42 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr13 39599660 - NM_025138 PROSER1 1 0.13 0.18 10 3.45 70.93 32 6.46 Yes 19 0.55 No 0 0 No -31 0.81 Yes 39 83.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 39605783 - NM_025138 PROSER1 1 1.02 1.33 47 -11.23 0 15 3.99 No 51 -4.61 No 28 0.49 Yes -40 0.88 Yes 30 88.03 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36249751 + NM_001039887 PROSER3 1 3.59 0.46 24 4.91 85.02 18 7 Yes 61 1.39 Yes 0 0 No -17 0.6 No 53 84.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 36249754 + NM_001039887 PROSER3 1 2.51 0.32 17 2.83 79.69 21 7.21 Yes 64 1.38 Yes 0 0 No -20 0.84 Yes 50 89.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36250226 + NM_001039887 PROSER3 1 5.97 0.78 35 10 85.58 17 7.81 Yes 4 1.82 Yes 0 0 No -26 0.81 Yes 54 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 36253156 + NM_001039887 PROSER3 1 61 9.71 72 3.06 81.16 27 6.81 Yes 49 0.58 No 23 0.88 Yes -26 0.72 Yes 44 88.65 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36255683 + NM_001039887 PROSER3 1 0.66 0.19 11 3.18 80.58 25 4.06 No 53 -2.68 No 0 0 No -25 0.62 No 42 56.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36255967 + NM_001039887 PROSER3 1 26.76 5.06 68 8.99 82.81 32 5.87 Yes 42 1.71 Yes 23 0.61 Yes -23 0.68 Yes 47 64.75 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 36256003 + NM_001039887 PROSER3 1 1.06 0.24 14 6.95 83.76 13 5.3 No 0 0.96 Yes 0 0 No -23 0.68 Yes 48 73.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36259500 + NM_001039887 PROSER3 1 2.8 0.39 20 9.34 92.67 27 5.74 Yes 14 0.66 No 0 0 No -26 0.65 No 40 72.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 36259666 + NM_001039887 PROSER3 1 0.72 0.11 7 5.18 80.22 19 6.42 Yes 35 1.14 Yes 29 0.15 Yes -29 0.49 No 34 65.54 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 13633767 + NM_003675 PRPF18 1 6.24 6.17 71 7.77 85.23 27 5.57 Yes 14 0.58 No 26 0.71 Yes -26 0.85 Yes 44 80.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr10 13655127 + NM_003675 PRPF18 1 0.36 0.36 20 12.17 88.88 20 5.46 No 7 0.99 Yes 0 0 No -23 0.72 Yes 51 70.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13656071 + NM_003675 PRPF18 1 0.17 0.17 10 7.6 81.11 28 6.48 Yes 60 0.09 No 0 0 No -27 0.68 Yes 43 60.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 60664764 - NM_014502 PRPF19 1 0.04 0.24 14 3.6 82.48 25 5.09 No 17 0.72 No 0 0 No -24 0.81 Yes 46 66.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 60668426 - NM_014502 PRPF19 1 0.05 0.31 16 4.67 83.37 16 7 Yes 62 -4.23 No 28 0.92 Yes -47 0.39 No 55 61.01 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 60668840 - NM_014502 PRPF19 1 0.02 0.13 8 -7.74 79.12 52 7.59 Yes 39 0.8 Yes 0 0 No -39 0.94 Yes 31 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 60672925 - NM_014502 PRPF19 1 0.23 0.74 34 11.16 88.26 19 7.47 Yes 6 1.03 Yes 22 0.51 Yes -22 0.69 Yes 48 83.39 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150297415 + NM_004698 PRPF3 1 0.23 0.14 9 -3.45 64.23 42 6.92 Yes 29 0.55 No 0 0 No -41 0.78 Yes 29 77.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 150299547 + NM_004698 PRPF3 1 0.22 0.26 14 9.43 89.4 47 6.92 Yes 34 0.37 No 0 0 No -36 0.55 No 34 48.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 150300015 + NM_004698 PRPF3 1 14.52 17.53 72 8.54 83.03 30 5.39 No 42 0.08 No 24 0.53 Yes -29 0.72 Yes 41 72.57 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 150302869 + NM_004698 PRPF3 1 0.34 0.44 23 5.54 76.79 14 5.2 No 66 -0.82 No 0 0 No -51 0.39 No 19 59.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 150307409 + NM_004698 PRPF3 1 0.1 0.1 7 -2.24 0 29 6.46 Yes 34 0.27 No 0 0 No -28 0.63 No 42 69.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 150312878 + NM_004698 PRPF3 1 1.13 1.19 46 -0.49 0 51 7.94 Yes 57 0.93 Yes 31 0.32 Yes -44 0.5 No 26 60.71 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 150314505 + NM_004698 PRPF3 1 0.58 0.71 33 7.23 86.35 24 7.07 Yes 11 1.5 Yes 0 0 No -23 0.88 Yes 47 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150316417 + NM_004698 PRPF3 1 0.1 0.14 9 8.88 80.14 28 5.62 Yes 65 0.25 No 0 0 No -27 0.73 Yes 43 77.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 150316851 + NM_004698 PRPF3 1 1.86 1.94 54 9.77 87.1 18 5.7 Yes NA NA NA 29 0.26 Yes -23 0.62 No 41 46.8 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 150318442 + NM_004698 PRPF3 1 0.13 0.14 7 7.46 83.01 27 7.18 Yes 70 0.82 Yes 0 0 No -26 0.89 Yes 44 90.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 54621620 + NM_015629 PRPF31 1 6.35 4.28 71 -1.34 62.36 27 5.14 No 25 -2.34 No 26 0.81 Yes -23 0.44 No 44 50.43 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 54621627 + NM_015629 PRPF31 1 1.51 1 43 -3.66 0 10 4 No 32 -2.08 No 26 0.81 Yes -30 0.46 No 37 53.58 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 54626616 + NM_015629 PRPF31 1 0.06 0.15 9 11.11 86.61 25 5.58 Yes 55 -1.42 No 0 0 No -18 0.59 No 39 52.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 54629874 + NM_015629 PRPF31 1 0.54 0.79 38 10.21 85.63 26 7.48 Yes 13 0.75 No 25 0.77 Yes -25 0.68 Yes 45 85.11 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 54631039 + NM_015629 PRPF31 1 0.07 0.14 9 10.78 80.28 33 5.51 No 9 0.85 Yes 0 0 No -25 0.67 Yes 45 67.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 54632111 + NM_015629 PRPF31 1 0.12 0.21 12 9.92 91.85 30 4.8 No 6 0.32 No 0 0 No -24 0.53 No 46 74.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 54632626 + NM_015629 PRPF31 1 0.08 0.15 10 -10.64 0 10 4 No NA NA NA 22 0.7 Yes -29 0.16 No 56 46.82 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52870931 + NM_032864 PRPF38A 1 0.46 1.4 52 6.54 79.46 31 5.49 No 4 0.66 No 0 0 No -30 0.26 No 51 67.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52880403 + NM_032864 PRPF38A 1 0.26 0.63 32 5.24 75.21 21 7 Yes 62 0.28 No 19 0.48 Yes -29 0.66 No 41 57.92 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 52880412 + NM_032864 PRPF38A 1 1.95 4.75 68 -5.2 0 15 4.24 No 2 1.01 Yes 19 0.48 Yes -14 0.68 Yes 56 77.6 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 109235804 + NM_018061 PRPF38B 1 0.28 0.35 22 -6.94 0 17 4.24 No 4 0.89 Yes 0 0 No -16 0.88 Yes 54 82.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109236193 + NM_018061 PRPF38B 1 0.09 0.1 7 7.33 82.07 19 5.55 No 6 1.34 Yes 20 0.76 Yes -18 0.69 Yes 37 73.99 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 109236211 + NM_018061 PRPF38B 1 5.97 6.58 72 5.56 91.24 21 5.2 No 24 1.52 Yes 20 0.76 Yes -20 0.84 Yes 50 82.59 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 109240431 + NM_018061 PRPF38B 1 2.02 1.75 50 10.22 83.37 22 5.73 Yes 9 1.78 Yes 0 0 No -21 0.53 No 49 70.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 109240568 + NM_018061 PRPF38B 1 7.55 6.1 71 8.88 81.36 36 6.76 Yes 14 1.21 Yes 0 0 No -26 0.82 Yes 44 80.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 45565626 + NM_017922 PRPF39 1 32.55 7.43 72 11.15 93.44 24 5.92 Yes 11 1.28 Yes 23 0.91 Yes -23 0.81 Yes 47 91.05 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 45565798 + NM_017922 PRPF39 1 6.89 1.6 51 2.89 79.63 34 6.46 Yes 70 1.58 Yes 24 0.58 Yes -24 0.6 No 46 72.74 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 45565851 + NM_017922 PRPF39 1 0.97 0.21 13 2.64 69.2 34 6.54 Yes 21 1.4 Yes 0 0 No -33 0.56 No 37 76.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 45567904 + NM_017922 PRPF39 1 0.21 0.13 9 3.53 76.41 27 5.74 Yes 14 0.92 Yes 0 0 No -26 0.72 Yes 44 73.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 45569169 + NM_017922 PRPF39 1 0.79 0.54 24 9 90.36 28 5.87 Yes 55 0.93 Yes 0 0 No -27 0.76 Yes 43 80.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 45577627 + NM_017922 PRPF39 1 0.48 0.5 25 -0.72 0 13 3.9 No 29 0.49 No 0 0 No -41 0.63 No 29 72.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 45579096 + NM_017922 PRPF39 1 27.34 16.01 72 4.34 75.72 56 7.82 Yes 43 2.32 Yes 24 0.78 Yes -24 0.83 Yes 46 77.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 45579805 + NM_017922 PRPF39 1 0.28 0.19 11 3.91 0 16 4.58 No 53 0.59 No 25 0.36 Yes -20 0.65 No 50 74.24 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr9 116038811 + NM_001322267 PRPF4 1 0.46 0.1 7 1.16 0 19 4.34 No 47 0.57 No 19 0.85 Yes -18 0.66 No 52 46.51 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 116038827 + NM_001322267 PRPF4 1 394.61 97.1 72 1.68 90.06 23 4.98 No 63 0.57 No 19 0.85 Yes -22 0.78 Yes 48 88.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 116046594 + NM_001322267 PRPF4 1 0.43 0.67 36 4.4 79.49 15 4.11 No 37 0.86 Yes 0 0 No -49 0.5 No 15 30.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 116046598 + NM_001322267 PRPF4 1 0.82 1.35 51 0.93 0 19 4.39 No 41 0.85 Yes 0 0 No -53 0.68 Yes 17 59.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 153513653 - NM_017892 PRPF40A 1 0.12 0.53 26 6.82 81.8 34 4.26 No 14 0.72 No 0 0 No -26 0.67 Yes 44 59.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 153513656 - NM_017892 PRPF40A 1 0.83 3.9 69 7.41 83.34 31 4.08 No 11 0.7 No 0 0 No -23 0.61 No 47 55.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 153514304 - NM_017892 PRPF40A 1 0.1 0.44 26 2.25 0 22 4.58 No 66 0.62 No 0 0 No -21 0.69 Yes 49 62.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 153519211 - NM_017892 PRPF40A 1 0.03 0.11 7 -10.95 0 33 7.54 Yes 0 0.69 No 0 0 No -32 0.93 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 153519686 - NM_017892 PRPF40A 1 0.05 0.22 12 -14.96 0 25 6.91 Yes 50 0.36 No 0 0 No -24 0.55 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 153520494 - NM_017892 PRPF40A 1 25.2 69.72 72 6.03 80.31 25 5 No -2 1.08 Yes 22 0.65 Yes -22 0.68 Yes 48 70.64 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 153522262 - NM_017892 PRPF40A 1 0.04 0.14 8 4.38 85.02 22 5.1 No 9 1.13 Yes 0 0 No -21 0.93 Yes 49 97.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 153527894 - NM_017892 PRPF40A 1 0.06 0.25 16 -15.47 0 32 7.61 Yes 19 0.4 No 0 0 No -31 0.69 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 153527895 - NM_017892 PRPF40A 1 0.04 0.19 14 -13.67 0 31 7.54 Yes 18 0.41 No 0 0 No -30 0.71 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 153529088 - NM_017892 PRPF40A 1 0.04 0.15 11 0.39 66.2 13 4.36 No 58 0.4 No 0 0 No -12 0.38 No 49 41.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 153533052 - NM_017892 PRPF40A 1 0.03 0.18 11 6.38 76.84 31 5.34 No 18 0.98 Yes 0 0 No -25 0.53 No 45 75.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 153533111 - NM_017892 PRPF40A 1 0.07 0.4 24 3.67 75.84 32 7 Yes 19 2.11 Yes 0 0 No -31 0.77 Yes 39 95.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 153537850 - NM_017892 PRPF40A 1 0.08 0.29 16 -10.83 0 33 9.62 Yes 4 0.76 No 0 0 No -28 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 153547487 - NM_017892 PRPF40A 1 0.03 0.1 7 0.72 0 16 3.87 No 22 0.56 No 0 0 No -34 0.51 No 36 50.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 153549991 - NM_017892 PRPF40A 1 0.12 0.42 19 5.56 85.96 27 6.35 Yes 0 0.8 Yes 26 0.93 Yes -26 0.75 Yes 44 82.03 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 153550858 - NM_017892 PRPF40A 1 0.08 0.26 13 2.35 0 35 4.76 No 41 1.16 Yes 0 0 No -34 0.92 Yes 36 91.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 153557528 - NM_017892 PRPF40A 1 0.04 0.13 8 1.14 83.28 34 6.22 Yes 21 0.88 Yes 0 0 No -27 0.76 Yes 43 67.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 153571144 - NM_017892 PRPF40A 1 1.88 5.69 70 7.37 90.46 21 4.5 No 28 0.42 No 25 0.67 Yes -25 0.8 Yes 45 91.37 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 153571157 - NM_017892 PRPF40A 1 0.17 0.46 26 4.08 67.27 55 7.14 Yes 15 0.43 No 25 0.67 Yes -35 0.68 Yes 35 88.52 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 4027606 + NM_003913 PRPF4B 1 0.09 0.14 9 7.06 85.86 33 5.36 No 65 0.91 Yes 0 0 No -25 0.55 No 51 72.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 4027924 + NM_003913 PRPF4B 1 0.22 0.35 21 7.45 85.4 13 4.97 No 0 1.08 Yes 0 0 No -29 0.93 Yes 41 93.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 4043324 + NM_003913 PRPF4B 1 0.1 0.19 13 3.88 74.35 22 4.9 No 70 -6.91 No 0 0 No -21 0.85 Yes 49 68.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 4043341 + NM_003913 PRPF4B 1 0.17 0.31 18 -0.09 69.11 26 4.9 No -3 0.48 No 0 0 No -25 0.75 Yes 45 77.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 4047419 + NM_003913 PRPF4B 1 0.3 0.43 20 0.24 0 14 4.26 No 72 1.38 Yes 0 0 No -29 0.35 No 41 49.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 4047422 + NM_003913 PRPF4B 1 0.08 0.13 8 -3.22 71.9 17 4.57 No 75 1.37 Yes 0 0 No -26 0.45 No 23 34.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 4049585 + NM_003913 PRPF4B 1 0.1 0.17 8 4.24 74.72 24 6.92 Yes 48 -3.51 No 0 0 No -29 0.57 No 41 55.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 4055786 + NM_003913 PRPF4B 1 0.53 0.93 41 9.39 85.2 31 6.62 Yes 61 -3.06 No 0 0 No -30 0.59 No 40 67.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 4056760 + NM_003913 PRPF4B 1 0.29 0.42 20 4.88 77.43 33 5.28 No 13 0.89 Yes 25 0.93 Yes -25 0.67 Yes 45 86.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr20 62612802 + NM_012469 PRPF6 1 0.28 0.65 31 7.75 92.44 35 6.22 Yes -1 -0.8 No 0 0 No -34 0.66 No 51 62.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62614482 + NM_012469 PRPF6 1 0.44 0.93 40 5.58 81.66 31 7.6 Yes 27 -1.39 No 0 0 No -39 0.4 No 31 42.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62616260 + NM_012469 PRPF6 1 0.05 0.13 9 -11.33 0 30 6.4 Yes 17 1.34 Yes 0 0 No -29 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 62632519 + NM_012469 PRPF6 1 0.11 0.17 11 9.77 81.57 12 4.03 No 74 -3.95 No 0 0 No -28 0.42 No 47 52.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62632833 + NM_012469 PRPF6 1 0.11 0.21 13 9.14 85.88 19 5.58 Yes 6 1.89 Yes 0 0 No -25 0.79 Yes 45 66.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 62632872 + NM_012469 PRPF6 1 0.06 0.1 7 3.56 84.88 34 6.02 Yes 45 1.83 Yes 0 0 No -33 0.74 Yes 37 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62642685 + NM_012469 PRPF6 1 0.13 0.28 14 0.42 60.3 15 5.44 No 2 -1.26 No 0 0 No -23 0.62 No 20 12.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62650161 + NM_012469 PRPF6 1 0.05 0.17 10 6.17 73.56 26 5.29 No 0 0.77 No 0 0 No -25 0.68 Yes 45 65.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 62654166 + NM_012469 PRPF6 1 0.1 0.36 18 7.38 87.73 18 3.85 No 64 1.37 Yes 0 0 No -28 0.45 No 45 48.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 62664199 + NM_012469 PRPF6 1 0.23 0.46 20 -4.3 0 9 3.87 No 16 -0.01 No 0 0 No -28 0.89 Yes 42 92.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1554141 - NM_006445 PRPF8 1 0.04 0.21 11 10.51 93.38 27 6.41 Yes 14 1.55 Yes 26 0.92 Yes -26 0.95 Yes 44 96.84 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 1554845 - NM_006445 PRPF8 1 0.07 0.32 16 -7.55 71.9 30 6 Yes 17 0.66 No 0 0 No -29 0.94 Yes 41 90.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1555332 - NM_006445 PRPF8 1 0.03 0.15 11 2.81 72.58 49 7.14 Yes 36 1.02 Yes 32 0.88 Yes -32 0.91 Yes 38 83.57 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 1562691 - NM_006445 PRPF8 1 0.16 0.88 42 11.58 87.43 23 4.97 No 72 -3.45 No 0 0 No -25 0.56 No 45 62.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 1565041 - NM_006445 PRPF8 1 0.05 0.21 14 6.02 85.82 17 5.48 No 4 0.13 No 0 0 No -23 0.68 Yes 47 63.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 1576072 - NM_006445 PRPF8 1 0.02 0.13 9 9.73 91.69 19 5.57 Yes 53 -1.78 No 0 0 No -21 0.79 Yes 49 77.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1576772 - NM_006445 PRPF8 1 0.3 1.24 49 5.4 79.15 16 5.2 No 53 -1.32 No 0 0 No -20 0.59 No 50 63.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 1578617 - NM_006445 PRPF8 1 0.23 1.1 46 4.22 82 20 4.86 No 37 1.53 Yes 0 0 No -19 0.4 No 51 51.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 1580155 - NM_006445 PRPF8 1 0.05 0.21 12 11.54 85.34 24 6.96 Yes 72 0.58 No 0 0 No -24 0.82 Yes 46 86.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1580898 - NM_006445 PRPF8 1 0.11 0.33 20 4.28 75.09 26 5.25 No 1 0.73 No 0 0 No -25 0.96 Yes 45 94.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1583006 - NM_006445 PRPF8 1 0.06 0.35 19 2.97 81.95 23 5.29 No 10 0.47 No 0 0 No -22 0.89 Yes 48 77.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 106873246 + NM_002764 PRPS1 1 0.27 0.46 28 10.04 83.47 21 5.15 No 57 1.47 Yes 0 0 No -20 0.73 Yes 50 67.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 12817659 + NM_002765 PRPS2 1 0.05 0.11 7 7.56 83.56 30 5.3 No 17 0.19 No 0 0 No -26 0.51 No 44 64.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 74314526 - NM_001330503 PRPSAP1 1 0.5 0.4 23 10.32 94.1 41 6.38 Yes 10 0.68 No 0 0 No -22 0.67 Yes 48 66.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 18781890 + NM_001243936 PRPSAP2 1 0.16 0.47 23 1 83.28 30 6.27 Yes 17 0.33 No 0 0 No -24 0.41 No 46 45.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 18807592 + NM_001243936 PRPSAP2 1 0.31 0.47 28 3.01 0 23 4.37 No 55 -3.42 No 31 0.5 Yes -31 0.66 Yes 39 76.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 18811093 + NM_001243936 PRPSAP2 1 0.25 0.44 26 3.71 70.97 21 3.69 No 0 0.75 No 0 0 No -24 0.53 No 46 47.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 18814356 + NM_001243936 PRPSAP2 1 0.15 0.28 16 9.9 86.94 28 5.92 Yes 68 1.2 Yes 0 0 No -27 0.87 Yes 43 88.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 18819708 + NM_001243936 PRPSAP2 1 0.22 0.42 24 3.19 84.41 30 6 Yes 74 0.27 No 0 0 No -29 0.9 Yes 41 96.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 18819733 + NM_001243936 PRPSAP2 1 0.12 0.26 16 5.76 90.92 28 5.83 Yes 66 -2.34 No 0 0 No -27 0.76 Yes 16 92.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 18820744 + NM_001243936 PRPSAP2 1 0.94 1.82 59 3.61 84.02 40 7.14 Yes 27 1.03 Yes 39 0.34 Yes -39 0.56 No 31 81.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr17 18821602 + NM_001243936 PRPSAP2 1 0.74 1.46 55 3.39 75.88 42 5.96 Yes 59 0.73 No 0 0 No -41 0.95 Yes 29 97.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 18827202 + NM_001243936 PRPSAP2 1 0.11 0.22 15 -1.38 0 35 6.26 Yes 31 1.19 Yes 33 0.13 Yes -35 0.38 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 18832879 + NM_001243936 PRPSAP2 1 0.14 0.31 17 11.91 84.03 22 6.78 Yes 9 1.84 Yes 21 0.87 Yes -21 0.8 Yes 49 86.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 57238119 + NM_018304 PRR11 1 0.29 0.31 16 6.53 81.4 31 6.42 Yes 18 0 No 30 0.76 Yes -30 0.9 Yes 40 94.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 57240959 + NM_018304 PRR11 1 2 1.71 49 9.08 80.36 23 5.83 Yes 59 -2.83 No 22 0.62 Yes -27 0.57 No 48 61.26 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 57269472 + NM_018304 PRR11 1 0.11 0.13 9 7.75 74.62 25 5.29 No 73 0.17 No 0 0 No -24 0.64 No 46 42.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 57276945 + NM_018304 PRR11 1 0.47 0.6 31 6.86 72.68 36 4.99 No 5 1.59 Yes 0 0 No -30 0.57 No 40 66.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 50102549 + NM_020719 PRR12 1 1.35 0.6 34 2.27 75.95 19 4.89 No 33 1.57 Yes 0 0 No -21 0.63 No 25 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 53836049 + NM_018457 PRR13 1 0.11 0.24 16 4.78 83.32 25 6.04 Yes 62 -3.4 No 0 0 No -28 0.56 No 42 81.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 53836171 + NM_018457 PRR13 1 0.07 0.17 9 0.58 74.71 31 5.61 Yes 18 1.87 Yes 0 0 No -30 0.63 No 40 74.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 53836210 + NM_018457 PRR13 1 0.12 0.29 20 -3.22 0 17 4.12 No 57 1.89 Yes 0 0 No -16 0.62 No 54 56.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 53837324 + NM_018457 PRR13 1 0.13 0.58 30 7.48 0 19 4.57 No 60 1.08 Yes 19 0.64 Yes -19 0.82 Yes 51 79.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53837179 + NM_018457 PRR13 1 0.45 1.96 62 1.22 0 33 7.54 Yes 20 1.91 Yes 0 0 No -32 0.79 Yes 38 93.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53837270 + NM_018457 PRR13 1 0.86 3.86 69 8.24 87.92 19 7.55 Yes 6 1.11 Yes 26 0.58 Yes -29 0.48 No 41 61.04 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 53837312 + NM_018457 PRR13 1 0.04 0.17 10 0 69.94 24 5.2 No 48 1.08 Yes 19 0.64 Yes -60 0.47 No 50 23.28 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 53837324 + NM_018457 PRR13 1 3.22 14.06 72 7.48 0 19 4.57 No 60 1.08 Yes 19 0.64 Yes -19 0.82 Yes 51 79.24 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 53837350 + NM_018457 PRR13 1 0.84 3.6 68 6.32 77.41 15 5.92 Yes 2 0.16 No 28 0.44 Yes -28 0.32 No 25 42.36 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 53837459 + NM_018457 PRR13 1 0.21 0.93 43 -0.36 66.53 90 9.52 Yes 19 0.61 No 34 0.21 Yes -31 0.57 No 39 54.61 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 53837462 + NM_018457 PRR13 1 0.7 3.03 65 -0.57 68.28 93 9.65 Yes 22 0.6 No 34 0.21 Yes -34 0.57 No 36 47.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 53839384 + NM_018457 PRR13 1 0.05 0.57 29 11.27 81.46 28 7.1 Yes 74 1.16 Yes 0 0 No -28 0.72 Yes 42 57.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 53839827 + NM_018457 PRR13 1 0.04 0.39 25 10.55 86.63 25 3.34 No 55 2.03 Yes 0 0 No -28 0.8 Yes 42 80.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53839830 + NM_018457 PRR13 1 0.01 0.17 12 7.02 83.83 28 3.47 No 58 2.03 Yes 0 0 No -31 0.72 Yes 39 81.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30666653 + NM_024031 PRR14 1 0.1 0.13 8 -3.28 76.71 28 5.03 No 7 0.78 Yes 20 0.83 Yes -27 0.74 Yes 43 63.74 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 30666834 + NM_024031 PRR14 1 0.16 0.19 11 -4.85 0 10 4.58 No 22 1.18 Yes 0 0 No -42 0.65 No 28 78.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 30666848 + NM_024031 PRR14 1 0.16 0.21 10 2.32 86.38 24 4.8 No 36 1.17 Yes 0 0 No -56 0.33 No 14 74.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 30667330 + NM_024031 PRR14 1 0.33 0.47 24 -1.19 64.35 11 5.1 No -2 0.32 No 24 0.64 Yes -27 0.46 No 60 35.99 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr22 32100681 - NM_173566 PRR14L 1 0.72 0.4 21 9.5 92.53 21 6.37 Yes 53 1.71 Yes 0 0 No -28 0.56 No 50 61.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 32113275 - NM_173566 PRR14L 1 0.93 0.9 41 3.4 81.06 29 7.63 Yes 37 0.4 No 0 0 No -28 0.89 Yes 42 91.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 32119997 - NM_173566 PRR14L 1 0.17 0.15 10 4.47 91.91 22 4.8 No 9 0.29 No 0 0 No -22 0.69 Yes 49 53.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 32129797 - NM_173566 PRR14L 1 0.17 0.18 12 8.44 81.6 35 6 Yes 22 0.86 Yes 0 0 No -34 0.85 Yes 36 92.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 32144234 - NM_173566 PRR14L 1 3.03 0.68 30 5.47 82.54 29 8.84 Yes 44 1.37 Yes 0 0 No -28 0.81 Yes 42 74.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 45110669 + NM_001017529 PRR5 1 0.6 0.13 8 10.61 77.94 34 5.74 Yes 21 1.81 Yes 0 0 No -22 0.51 No 45 57.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 45123549 + NM_001017529 PRR5 1 1.58 0.21 12 6.48 87.89 16 7.09 Yes 3 0.83 Yes 0 0 No -24 0.72 Yes 46 82.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 45125193 + NM_001017529 PRR5 1 0.6 0.11 7 6.19 93.5 23 5 No 54 0.84 Yes 0 0 No -22 0.72 Yes 48 66.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 45126489 + NM_001017529 PRR5 1 1.98 0.31 20 8.64 84.42 29 5.91 Yes 75 0.96 Yes 28 0.31 Yes -28 0.47 No 42 68.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr22 45127614 + NM_001017529 PRR5 1 7.33 1.33 44 -2.91 0 25 6.1 Yes 12 0.92 Yes 26 0.74 Yes -24 0.84 Yes 46 87.28 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr22 45130923 + NM_001017529 PRR5 1 1.12 0.19 10 -5.02 0 21 4.09 No 36 1.58 Yes 0 0 No -48 0.63 No 19 69.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 45132656 + NM_001017529 PRR5 1 0.44 0.1 7 0.38 0 29 5.74 Yes 16 0.99 Yes 0 0 No -28 0.92 Yes 42 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 126854445 + NM_130809 PRRC1 1 0.11 0.15 10 11.03 94.37 36 6.23 Yes 49 0.97 Yes 0 0 No -24 0.41 No 40 52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 126883513 + NM_130809 PRRC1 1 0.06 0.1 7 -9.75 0 55 6.17 Yes 75 0.85 Yes 26 0.28 Yes -29 0.5 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 134312012 + NM_013318 PRRC2B 1 0.06 0.11 8 2.51 0 9 3.87 No 19 2.37 Yes 0 0 No -31 0.74 Yes 39 88.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134312232 + NM_013318 PRRC2B 1 2.3 4.07 69 6.59 87.31 16 6.06 Yes 3 1.32 Yes 0 0 No -34 0.74 Yes 36 65.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 134334556 + NM_013318 PRRC2B 1 3.69 7.51 72 -2.49 0 9 3.87 No 47 -3.7 No 0 0 No -30 0.67 Yes 40 84.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134340152 + NM_013318 PRRC2B 1 7.35 9.92 72 -5.88 69.28 28 5.01 No 66 0.22 No 0 0 No -22 0.75 Yes 43 76.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134346180 + NM_013318 PRRC2B 1 0.17 0.18 9 -6.08 0 14 3.48 No 21 1.81 Yes 0 0 No -33 0.89 Yes 37 94.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134348873 + NM_013318 PRRC2B 1 0.09 0.11 8 -3.71 0 16 4.19 No 58 1.49 Yes 23 0.71 Yes -15 0.82 Yes 55 68.47 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr9 134353854 + NM_013318 PRRC2B 1 0.4 0.56 28 -0.43 0 34 5.74 Yes 47 0.24 No 30 0.35 Yes -24 0.49 No NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 134354193 + NM_013318 PRRC2B 1 0.09 0.13 8 7.12 81.96 25 5.17 No 12 0.11 No 0 0 No -24 0.6 No 46 61.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 134357760 + NM_013318 PRRC2B 1 81.62 57.64 72 4.94 79.76 26 6.29 Yes 13 1.43 Yes 23 0.87 Yes -26 0.86 Yes 44 84.94 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 134360076 + NM_013318 PRRC2B 1 0.27 0.42 24 6.61 0 30 7.42 Yes 71 -1.66 No 0 0 No -29 0.8 Yes 41 93.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134361867 + NM_013318 PRRC2B 1 3.14 5.17 70 5.22 85.49 26 6.08 Yes 52 0.62 No 0 0 No -25 0.72 Yes 45 70.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134362601 + NM_013318 PRRC2B 1 0.7 1.14 38 8.51 84.05 15 5.62 Yes 66 1.16 Yes 0 0 No -24 0.58 No 46 74.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 171458457 + NM_015172 PRRC2C 1 0.11 0.28 16 5.98 73.16 18 4.27 No 5 0.9 Yes 0 0 No -24 0.84 Yes 46 92.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 171481164 + NM_015172 PRRC2C 1 0.1 0.28 15 -0.08 0 36 5.45 No 23 1.31 Yes 0 0 No -27 0.77 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 171482133 + NM_015172 PRRC2C 1 0.65 0.51 26 5.35 78.17 18 4.43 No 74 1.09 Yes 26 0.92 Yes -26 0.85 Yes 44 91.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 171482133 + NM_015172 PRRC2C 1 182.38 146.89 72 5.35 78.17 18 4.43 No 74 1.09 Yes 26 0.92 Yes -26 0.85 Yes 44 91.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 171483682 + NM_015172 PRRC2C 1 0.05 0.18 12 -3.09 0 11 3.26 No 19 0.71 No 0 0 No -31 0.5 No 39 48.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 171486717 + NM_015172 PRRC2C 1 0.1 0.32 18 -0.02 0 22 5.59 Yes 69 1.12 Yes 33 0.71 Yes -21 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 171486724 + NM_015172 PRRC2C 1 0.06 0.22 13 1.99 0 29 6.12 Yes 76 1.12 Yes 33 0.71 Yes -28 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 171491605 + NM_015172 PRRC2C 1 0.13 0.44 21 4.8 76.1 24 4.57 No 24 0.65 No 0 0 No -23 0.68 Yes 38 59.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 171492361 + NM_015172 PRRC2C 1 0.27 0.9 42 2.58 81.62 40 5.28 No 6 1.55 Yes 0 0 No -42 0.44 No 28 72.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 171492581 + NM_015172 PRRC2C 1 0.03 0.1 7 -1.99 0 18 3.63 No 16 0.89 Yes 0 0 No -28 0.73 Yes 53 54.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 171505173 + NM_015172 PRRC2C 1 0.07 0.19 11 1.62 0 9 3.87 No 4 0.54 No 0 0 No -31 0.87 Yes 39 88.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 171530159 + NM_015172 PRRC2C 1 3.31 11.35 72 7.57 85.68 34 6.85 Yes 28 0.63 No 0 0 No -33 0.54 No 36 60.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 171535380 + NM_015172 PRRC2C 1 0.17 0.58 26 -13.26 0 15 4.24 No 74 -3.7 No 0 0 No -34 0.41 No 36 62.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 171538490 + NM_015172 PRRC2C 1 0.07 0.22 14 10.24 81.51 35 7.67 Yes 22 1.3 Yes 0 0 No -34 0.9 Yes 36 86.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 171542423 + NM_015172 PRRC2C 1 0.06 0.19 13 5.84 85.46 29 7.58 Yes 51 1.02 Yes 0 0 No -28 0.35 No 50 36.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 171558507 + NM_015172 PRRC2C 1 5.9 10.13 72 8.49 93.03 38 6.43 Yes 25 0.17 No 30 0.8 Yes -30 0.5 No 33 64.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 171560290 + NM_015172 PRRC2C 1 55.68 98.69 72 10.66 88.92 25 5.97 Yes 5 1.82 Yes 24 0.9 Yes -24 0.59 No 46 85.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 171560293 + NM_015172 PRRC2C 1 0.32 0.63 34 -3.21 71.35 28 6.19 Yes 8 1.8 Yes 0 0 No -27 0.59 No 43 83.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 171560734 + NM_015172 PRRC2C 1 0.51 0.83 38 -6.62 0 12 4.02 No 37 0.95 Yes 0 0 No -33 0.87 Yes 37 92.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 32858261 + NM_024081 PRRG4 1 4.69 1.31 48 4.8 75.64 27 5.2 No 69 0.42 No 0 0 No -26 0.82 Yes 44 70.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 150991032 + NM_021222 PRUNE1 1 41.92 5.57 71 9.4 92.96 21 5.66 Yes 26 1.19 Yes 20 0.83 Yes -20 0.54 No 50 71.45 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 150991035 + NM_021222 PRUNE1 1 3.15 0.42 23 5.79 84.18 24 5.92 Yes 29 1.19 Yes 0 0 No -21 0.63 No 47 78.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 151003847 + NM_021222 PRUNE1 1 0.5 0.18 11 9.44 90.51 23 5.83 Yes 10 1.17 Yes 0 0 No -22 0.79 Yes 48 69.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 151003847 + NM_021222 PRUNE1 1 2.64 0.9 41 9.44 90.51 23 5.83 Yes 10 1.17 Yes 0 0 No -22 0.79 Yes 48 69.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 151006372 + NM_021222 PRUNE1 1 0.38 0.14 10 5.95 80.73 22 6.4 Yes 9 2.43 Yes 0 0 No -21 0.71 Yes 49 88.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 73576165 - NM_002778 PSAP 1 0.04 0.25 14 6.05 87.49 28 6.6 Yes NA NA NA 0 0 No -27 0.68 Yes 43 80.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 73577252 - NM_002778 PSAP 1 0.02 0.13 7 -6.45 0 20 4.46 No 30 0.19 No 25 0.92 Yes -19 0.93 Yes 63 24.04 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 73577388 - NM_002778 PSAP 1 0.03 0.19 10 6.54 75.06 27 7 Yes 14 1.24 Yes 0 0 No -26 0.88 Yes 44 91.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 73577460 - NM_002778 PSAP 1 0.14 1.07 45 4.87 75.03 41 6.83 Yes 28 1.1 Yes 0 0 No -18 0.84 Yes 52 92.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 73578481 - NM_002778 PSAP 1 0.02 0.18 12 -12.77 0 40 7.28 Yes 27 1.6 Yes 0 0 No -39 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 73578867 - NM_002778 PSAP 1 0.04 0.17 10 -25.16 0 17 6.38 Yes NA NA NA 0 0 No -28 0.72 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 73579654 - NM_002778 PSAP 1 0.01 0.1 7 -2.44 0 29 8.56 Yes 16 1.18 Yes 0 0 No -28 0.97 Yes 42 97.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 73579657 - NM_002778 PSAP 1 0.03 0.26 16 -12.18 0 26 8.38 Yes 13 1.2 Yes 0 0 No -25 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 73580090 - NM_002778 PSAP 1 0.12 1.1 48 -0.12 75.06 33 6.08 Yes 20 0.67 No 0 0 No -32 0.86 Yes 38 71.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 73582417 - NM_002778 PSAP 1 2.66 23.76 72 -37.06 0 14 4.18 No 49 -2.04 No 0 0 No -37 0.46 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 73585645 - NM_002778 PSAP 1 0.07 0.6 27 -3.31 0 9 3.87 No 26 0.65 No 0 0 No -30 0.83 Yes 40 79.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 73588856 - NM_002778 PSAP 1 0.04 0.29 17 -4.78 0 17 4.58 No 45 0.36 No 26 0.93 Yes -42 0.53 No 28 82.16 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 73588868 - NM_002778 PSAP 1 0.05 0.36 20 0.24 65.31 19 6.24 Yes 33 0.36 No 26 0.93 Yes -30 0.53 No 40 79.85 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr10 73591677 - NM_002778 PSAP 1 0.01 0.1 7 -10.34 0 47 5.85 Yes 34 0.27 No 0 0 No -26 0.47 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 73594257 - NM_002778 PSAP 1 0.03 0.22 15 -0.45 0 14 3.87 No 13 1.29 Yes 0 0 No -25 0.96 Yes 45 97.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 80942589 + NM_058179 PSAT1 1 0.04 0.11 7 8.02 91.55 16 5.04 No 39 0.85 Yes 0 0 No -26 0.64 No 44 80.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 113932205 + NM_012455 PSD4 1 0.12 0.24 14 9.51 94.04 15 5.2 No 2 0.43 No 0 0 No -20 0.6 No 50 71.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 113941976 + NM_012455 PSD4 1 0.29 0.38 20 3.97 84.41 32 6.16 Yes 19 0.67 No 0 0 No -31 0.93 Yes 39 96.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 113942908 + NM_012455 PSD4 1 0.31 0.78 34 9.02 88.56 77 10.05 Yes 64 2.09 Yes 28 0.96 Yes -26 0.42 No 48 80.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 113943517 + NM_012455 PSD4 1 0.13 0.18 11 -0.18 76.88 41 6.86 Yes 71 1.38 Yes 19 0.73 Yes -23 0.54 No 47 59.56 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 113943525 + NM_012455 PSD4 1 0.11 0.15 9 -10.69 0 18 4.12 No 74 0.32 No 19 0.73 Yes -45 0.46 No 25 53.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 113943537 + NM_012455 PSD4 1 0.4 0.57 29 2.69 0 15 4.58 No 69 -1.6 No 19 0.73 Yes -19 0.49 No 51 53.24 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 113943580 + NM_012455 PSD4 1 0.14 0.22 11 -0.68 77.66 23 4.69 No 10 -0.04 No 0 0 No -22 0.86 Yes 48 41.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 113943671 + NM_012455 PSD4 1 0.19 0.26 16 -2.42 0 14 4.47 No 25 0.35 No 0 0 No -18 0.71 Yes 52 39.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 113948873 + NM_012455 PSD4 1 0.42 0.93 33 11.06 88.27 32 5.84 Yes 36 1.23 Yes 0 0 No -31 0.84 Yes 39 82.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 113949933 + NM_012455 PSD4 1 0.15 0.39 23 -2.31 68.82 24 4.8 No 11 0.24 No 29 0.8 Yes -23 0.89 Yes 47 43.27 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 113952759 + NM_012455 PSD4 1 0.12 0.22 12 3.96 84.41 24 6.04 Yes 11 0.63 No 0 0 No -23 0.85 Yes 47 82.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 113955307 + NM_012455 PSD4 1 0.16 0.11 7 -4.86 72.47 21 4.7 No 2 1.53 Yes 18 0.65 Yes -20 0.82 Yes 50 85.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 113955326 + NM_012455 PSD4 1 69.73 45.57 72 1.46 73.45 22 5.29 No 21 1.45 Yes 18 0.65 Yes -39 0.7 Yes 31 66.08 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 73604819 + NM_000021 PSEN1 1 0.44 0.11 8 -3.75 0 43 7.67 Yes 73 -3.47 No 37 0.33 Yes -42 0.52 No 28 63.13 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 73614706 + NM_000021 PSEN1 1 0.35 0.39 20 6.31 77.13 27 5.48 No 71 -2.36 No 27 0.58 Yes -26 0.92 Yes 44 72.99 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 73616055 + NM_000021 PSEN1 1 0.49 0.24 14 9.91 86.8 13 6.52 Yes 0 0.35 No 0 0 No -38 0.41 No 28 61.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 73626716 + NM_000021 PSEN1 1 2.04 0.92 46 7.27 86.44 21 7.2 Yes 8 1.65 Yes 20 0.63 Yes -20 0.75 Yes 50 91.24 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 73632017 + NM_000021 PSEN1 1 0.25 0.13 7 5.91 85.05 24 5.07 No 11 0.22 No 0 0 No -23 0.71 Yes 47 68.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 73640961 + NM_000021 PSEN1 1 0.11 0.13 8 4.95 81.99 38 6.63 Yes 25 0.86 Yes 0 0 No -37 0.88 Yes 33 95.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 73675531 + NM_000021 PSEN1 1 0.16 0.18 11 7.18 81.66 28 5.57 Yes 32 1.22 Yes 27 0.95 Yes -27 0.95 Yes 43 97.89 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 227068169 + NM_012486 PSEN2 1 2.28 0.39 20 7.62 87.75 32 5.74 Yes 73 -4.08 No 28 0.32 Yes -31 0.59 No 49 62.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 227078356 + NM_012486 PSEN2 1 4.09 0.72 37 4.13 87.51 21 5.08 No 55 -3.09 No 0 0 No -23 0.57 No 47 62.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 227079443 + NM_012486 PSEN2 1 275.27 14.4 72 2.89 74.98 76 8.12 Yes 63 2.25 Yes 32 0.78 Yes -29 0.77 Yes 41 82.3 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 36236773 + NM_172341 PSENEN 1 8.36 7.54 72 6.72 77.48 43 4.84 No 40 1.14 Yes 0 0 No -42 0.76 Yes 49 44.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 36236800 + NM_172341 PSENEN 1 0.39 0.31 19 9.73 85.87 24 3.87 No 67 1.14 Yes 0 0 No -29 0.82 Yes 41 86.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36237589 + NM_172341 PSENEN 1 0.05 0.11 7 0.24 76.87 12 4.56 No 45 -2.79 No 0 0 No -22 0.77 Yes 48 62.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 36238280 + NM_172341 PSENEN 1 0.07 0.14 8 4.28 72.52 23 5.83 Yes 10 0.71 No 0 0 No -31 0.47 No 39 62.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 15471175 - NM_001317900 PSIP1 1 69.61 4.88 71 2.96 73.54 32 6.18 Yes 19 0.16 No 31 0.64 Yes -35 0.29 No 39 40.13 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 15471310 - NM_001317900 PSIP1 1 13.34 0.75 33 4.22 76.88 55 10.14 Yes 42 1.69 Yes 22 0.59 Yes -54 0.87 Yes 16 94.26 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 15472547 - NM_001317900 PSIP1 1 25.05 1.54 54 6.4 92.08 20 4.84 No 68 0.58 No 0 0 No -23 0.51 No 51 64.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 15472746 - NM_001317900 PSIP1 1 0.04 0.15 9 -5.52 59.48 44 4.87 No 31 0.71 No 0 0 No -31 0.58 No 39 39.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 15478545 - NM_001317900 PSIP1 1 0.08 0.53 30 -1.37 0 9 3.87 No 66 1.22 Yes 0 0 No -34 0.76 Yes 36 70.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 15486926 - NM_001317900 PSIP1 1 0.02 0.11 7 -3.23 0 25 5.19 No -4 0.57 No 0 0 No -24 0.86 Yes 46 80.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 15489439 - NM_001317900 PSIP1 1 0.08 0.46 24 6.58 80.12 21 7.21 Yes 8 1.84 Yes 20 0.92 Yes -20 0.87 Yes 50 92.71 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 15489604 - NM_001317900 PSIP1 1 0.04 0.19 11 6.4 88.76 34 6.32 Yes 48 1.09 Yes 0 0 No -37 0.43 No 37 56.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 15492224 - NM_001317900 PSIP1 1 0.88 4.35 71 9.89 98.54 26 5.44 No 13 0.87 Yes 21 0.71 Yes -25 0.62 No 45 69.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 15494985 - NM_001317900 PSIP1 1 0.03 0.15 9 9.93 95.5 33 7.46 Yes 20 1.07 Yes 0 0 No -24 0.54 No 46 56.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 15497062 - NM_001317900 PSIP1 1 0.23 1.1 44 8.06 89.16 24 3.95 No 45 0.58 No 0 0 No -23 0.73 Yes 47 58.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 15498650 - NM_001317900 PSIP1 1 0.17 0.79 33 4.12 69.41 28 5.8 Yes 74 0.31 No 0 0 No -27 0.84 Yes 43 85.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 15501790 - NM_001317900 PSIP1 1 0.3 1.49 50 6.84 91.68 28 5.17 No 29 -3.75 No 0 0 No -28 0.7 Yes 42 73.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 15506632 - NM_001317900 PSIP1 1 0.23 0.99 41 1.2 0 18 5.25 No 5 1.37 Yes 0 0 No -26 0.44 No 44 60.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67936934 + NM_006742 PSKH1 1 5.01 0.74 40 6.61 73.32 29 6.51 Yes 16 1.11 Yes 28 0.73 Yes -28 0.82 Yes 42 80.81 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 67957315 + NM_006742 PSKH1 1 0.68 0.38 19 6.49 84.89 32 6 Yes 32 1.11 Yes 0 0 No -29 0.82 Yes 41 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 14539290 - NM_001143937 PSMA1 1 0.08 0.71 34 -5.34 82.79 60 8.1 Yes 52 1.48 Yes 0 0 No -53 0.42 No 17 76.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 14539523 - NM_001143937 PSMA1 1 1.14 6.13 71 4.72 0 38 6.63 Yes 51 1.33 Yes 0 0 No -37 0.84 Yes 33 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 14541758 - NM_001143937 PSMA1 1 0.07 0.32 18 9.96 74.37 28 5.57 Yes 65 0.86 Yes 0 0 No -27 0.9 Yes 43 86.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 42957433 - NM_002787 PSMA2 1 0.11 1.21 45 -11.99 0 32 5.66 Yes 69 0.74 No 0 0 No -31 0.45 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 42961171 - NM_002787 PSMA2 1 0.01 0.18 8 8.43 89.88 50 7.74 Yes 37 1.57 Yes 0 0 No -31 0.53 No 39 59.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 42961536 - NM_002787 PSMA2 1 0.03 0.31 16 3.15 0 30 6.26 Yes 3 0.23 No 0 0 No -30 0.43 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 42963030 - NM_002787 PSMA2 1 0.03 0.36 16 -6.6 49 26 5.85 Yes 56 0.86 Yes 0 0 No -19 0.7 Yes 39 30.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 42964395 - NM_002787 PSMA2 1 0.02 0.26 14 -10.1 78.02 29 5.01 No 12 0.61 No 0 0 No -29 0.34 No 46 49.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 42967058 - NM_002787 PSMA2 1 0.02 0.17 9 -7.61 0 26 8.28 Yes 13 0.21 No 0 0 No -25 0.94 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 42970755 - NM_002787 PSMA2 1 0.48 5.03 72 1.93 73.2 51 5.83 Yes 32 1.81 Yes 44 0.71 Yes -44 0.51 No 26 72.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 58711829 + NM_002788 PSMA3 1 0.05 0.35 23 5.88 74.15 17 6.16 Yes 4 -1.83 No 29 0.38 Yes -31 0.76 Yes 39 83.36 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 58714480 + NM_002788 PSMA3 1 0.02 0.11 8 -0.98 72.67 16 3.8 No 24 1.02 Yes 28 0.75 Yes -36 0.92 Yes 34 85.08 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 58718841 + NM_002788 PSMA3 1 0.54 3.93 67 3.49 0 27 6.63 Yes 14 1.21 Yes 21 0.7 Yes -26 0.62 No 44 75.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 58720332 + NM_002788 PSMA3 1 0.01 0.11 7 2.4 83.57 26 5.48 No 41 0.94 Yes 0 0 No -25 0.64 No 45 78.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 58724466 + NM_002788 PSMA3 1 0.03 0.22 16 -0.75 0 25 5.92 Yes 65 0.45 No 0 0 No -28 0.37 No 42 62.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 58727666 + NM_002788 PSMA3 1 0.03 0.28 17 -13.94 0 26 5.07 No 52 0.38 No 24 0.86 Yes -25 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 58727676 + NM_002788 PSMA3 1 0.08 0.83 38 2.29 0 18 4.47 No 62 0.37 No 24 0.86 Yes -35 0.59 No 35 73.98 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 58727686 + NM_002788 PSMA3 1 0.22 2.18 60 0.71 0 18 4.35 No 72 0.37 No 25 0.16 Yes -17 0.46 No 25 54.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 58730423 + NM_002788 PSMA3 1 0.02 0.13 8 -2.23 0 35 5.83 Yes 22 0.48 No 0 0 No -34 0.62 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 58735673 + NM_002788 PSMA3 1 0.04 0.38 22 2.24 84.41 25 6.13 Yes 7 0.72 No 0 0 No -25 0.87 Yes 45 88.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 58753546 - NR_029434 PSMA3-AS1 1 30.91 4.88 70 5.73 91.05 22 6.03 Yes 53 1 Yes 0 0 No -22 0.51 No 48 56.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58755078 - NR_029434 PSMA3-AS1 1 1.86 0.24 11 6.78 76.71 56 5.27 No 5 -2.05 No 0 0 No -24 0.55 No 40 70.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 58755532 - NR_029434 PSMA3-AS1 1 34.1 5.78 69 4.22 77.47 25 5.33 No 12 0.48 No 24 0.89 Yes -24 0.83 Yes 46 79.94 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 58757580 - NR_029434 PSMA3-AS1 1 4.77 0.79 40 2.75 77.63 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.72 Yes 51 78.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 58757583 - NR_029434 PSMA3-AS1 1 2.44 0.5 25 3.86 84.24 17 6.93 Yes 4 1.19 Yes 0 0 No -27 0.42 No 54 47.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58759857 - NR_029434 PSMA3-AS1 1 16.61 8.94 71 12.45 91.48 39 7 Yes 26 1.25 Yes 38 0.62 Yes -38 0.87 Yes 32 90.75 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 58760263 - NR_029434 PSMA3-AS1 1 0.51 0.31 16 6.2 80.91 36 7.32 Yes 23 1.1 Yes 27 0.81 Yes -35 0.63 No 35 79.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 58760645 - NR_029434 PSMA3-AS1 1 8.12 4.18 72 5.4 74.43 22 6.8 Yes 9 0.64 No 30 0.37 Yes -21 0.53 No 49 51.12 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 58762530 - NR_029434 PSMA3-AS1 1 11.52 5.76 71 -21.28 0 16 3.87 No 42 1.71 Yes 31 0.71 Yes -36 0.52 No 34 62.85 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 58762532 - NR_029434 PSMA3-AS1 1 1.51 0.93 21 1.09 0 53 10.08 Yes 40 1.71 Yes 31 0.71 Yes -29 0.55 No 41 57.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 58763129 - NR_029434 PSMA3-AS1 1 0.29 0.18 9 6.89 76.7 30 4.97 No -2 0.83 Yes 0 0 No -29 0.51 No 41 58.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 58763673 - NR_029434 PSMA3-AS1 1 0.85 0.5 27 5.42 80.2 24 5.96 Yes 5 0.47 No 0 0 No -24 0.47 No 46 65.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 78834520 + NM_001330676 PSMA4 1 0.01 0.13 7 -21.6 0 22 5.24 No 9 1.56 Yes 0 0 No -21 0.82 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 78834917 + NM_001330676 PSMA4 1 0.8 7.67 72 7.53 92.4 19 5.74 Yes 6 0.58 No 26 0.76 Yes -23 0.63 No 47 57.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 78834920 + NM_001330676 PSMA4 1 0.03 0.25 14 3.1 84.31 22 6 Yes 9 0.55 No 0 0 No -26 0.62 No 44 57.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 109942925 - NM_001199774 PSMA5 1 0.01 0.14 8 10.01 89.22 25 6.53 Yes 12 0.58 No 0 0 No -25 0.42 No 45 42.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 109944709 - NM_001199774 PSMA5 1 0.13 1.4 49 2.9 0 26 6.34 Yes 13 1.91 Yes 0 0 No -29 0.77 Yes 41 70.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109945052 - NM_001199774 PSMA5 1 0.01 0.1 7 3.73 80.62 27 5.82 Yes 54 0.18 No 0 0 No -27 0.55 No 43 58.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 109945150 - NM_001199774 PSMA5 1 0.09 0.92 36 8.77 86.51 33 5.77 Yes 47 1.12 Yes 0 0 No -28 0.53 No 42 53.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 109952369 - NM_001199774 PSMA5 1 0.06 0.67 34 8.25 85.96 21 7.13 Yes 8 1.18 Yes 0 0 No -20 0.76 Yes 50 78.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109952664 - NM_001199774 PSMA5 1 0.02 0.15 10 2.61 70.47 31 5.66 Yes 54 0.86 Yes 31 0.87 Yes -30 0.59 No 52 52.74 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 109952716 - NM_001199774 PSMA5 1 0.13 1.17 49 5.05 83.03 15 4.82 No 2 0.94 Yes 0 0 No -26 0.82 Yes 44 84.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109953759 - NM_001199774 PSMA5 1 0.02 0.14 7 0.06 0 18 4.1 No 31 0.2 No 25 0.64 Yes -30 0.55 No 40 61.04 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 109954556 - NM_001199774 PSMA5 1 0.01 0.11 7 -23.68 0 27 6.55 Yes 43 1.87 Yes 0 0 No -27 0.63 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 109955757 - NM_001199774 PSMA5 1 0.01 0.13 8 -3.66 0 23 6.93 Yes 10 0.69 No 0 0 No -22 0.91 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 109957527 - NM_001199774 PSMA5 1 0.12 1.36 46 12.13 92.02 23 5.38 No 62 -2.73 No 25 0.72 Yes -25 0.74 Yes 45 82.19 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 109957973 - NM_001199774 PSMA5 1 0.05 0.32 22 4.51 83.54 16 4.69 No 17 0.86 Yes 0 0 No -35 0.7 Yes 35 55.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 109958664 - NM_001199774 PSMA5 1 0.03 0.25 16 10.83 93.25 45 6.05 Yes 32 1.05 Yes 0 0 No -27 0.93 Yes 43 82.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35782068 + NM_001282232 PSMA6 1 0.17 2.21 65 1.27 62.98 15 5 No 62 -4.95 No 23 0.62 Yes -23 0.56 No 49 27.95 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 35782149 + NM_001282232 PSMA6 1 0.02 0.19 10 6.36 85.39 16 4.69 No -3 0.06 No 0 0 No -24 0.64 No 46 72.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 60712019 - NM_002792 PSMA7 1 0.01 0.13 7 -5.6 0 15 4.26 No -3 0.55 No 22 0.92 Yes -14 0.29 No 61 66.12 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 60712522 - NM_002792 PSMA7 1 0.11 1.28 45 8.57 82.34 24 5.29 No 11 0.61 No 23 0.94 Yes -27 0.38 No 47 68.61 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 60714242 - NM_002792 PSMA7 1 0.04 0.42 25 2.8 0 9 4.58 No 21 2.5 Yes 0 0 No -33 0.82 Yes 37 89.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60714446 - NM_002792 PSMA7 1 0.01 0.14 10 6.75 76.4 27 5.22 No 14 0.96 Yes 0 0 No -27 0.41 No 44 50.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 170844510 - NM_002793 PSMB1 1 0.19 1.11 44 0.69 65.95 44 7.61 Yes 13 0.9 Yes 23 0.96 Yes -25 0.96 Yes 45 96.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 170846424 - NM_002793 PSMB1 1 0.02 0.11 7 -2.3 0 80 6.82 Yes 67 1.06 Yes 0 0 No -29 0.95 Yes 41 93.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170852810 - NM_002793 PSMB1 1 0.01 0.15 9 -9.51 0 17 4.24 No 17 1.17 Yes 0 0 No -38 0.69 Yes 32 70.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170855297 - NM_002793 PSMB1 1 0.18 2.04 57 -0.29 0 36 6.4 Yes -2 0.96 Yes 26 0.83 Yes -10 0.6 No 35 38.45 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 67968598 - NM_002801 PSMB10 1 0.1 0.64 34 -1.38 0 17 4.58 No 4 0.23 No 19 0.53 Yes -19 0.56 No 51 65.17 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr16 67968837 - NM_002801 PSMB10 1 0.03 0.11 7 -6.12 0 19 4.24 No 21 1.19 Yes 0 0 No -33 0.92 Yes 37 64.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 67968875 - NM_002801 PSMB10 1 0.08 0.31 18 -15.52 0 15 3.32 No 46 -3.33 No 18 0.84 Yes -21 0.73 Yes 49 54.51 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 67969508 - NM_002801 PSMB10 1 0.07 0.29 16 6.56 79.66 29 6.37 Yes 32 0.13 No 0 0 No -28 0.73 Yes 42 74.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36068970 - NM_002794 PSMB2 1 0.02 0.18 10 0.87 0 10 3.87 No 21 1.72 Yes 0 0 No -33 0.7 Yes 37 89.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36070910 - NM_002794 PSMB2 1 0.09 0.74 34 -10.73 0 14 4.01 No 53 -3.98 No 25 0.47 Yes -16 0.32 No 54 36.5 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 36073959 - NM_002794 PSMB2 1 0.05 0.39 20 3.03 0 32 8 Yes 19 0.95 Yes 0 0 No -31 0.55 No 39 56.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 36909472 + NM_002795 PSMB3 1 0.05 0.39 23 6.5 75.34 32 5.57 Yes 52 -4.32 No 0 0 No -31 0.27 No 45 23.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 36916760 + NM_002795 PSMB3 1 0.05 0.56 25 8.83 82.55 22 4.1 No 9 0.62 No 22 0.63 Yes -22 0.68 Yes 48 61.33 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 36918499 + NM_002795 PSMB3 1 0.02 0.19 11 6.47 81.74 45 4.54 No 21 0.68 No 0 0 No -23 0.77 Yes 47 78.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 36918643 + NM_002795 PSMB3 1 0.02 0.21 8 -0.82 74.95 19 4.8 No 50 -3.76 No 23 0.86 Yes -24 0.46 No 43 41.88 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 151373189 + NM_002796 PSMB4 1 0.03 0.38 18 7.3 83.13 29 5.51 No 16 0.46 No 0 0 No -24 0.56 No 46 57.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151374018 + NM_002796 PSMB4 1 0.01 0.1 7 -10.43 0 22 6.58 Yes 46 1.88 Yes 0 0 No -25 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 23497039 - NM_001130725 PSMB5 1 1.21 4.82 67 8.21 86.53 18 6.27 Yes 5 0.16 No 25 0.39 Yes -25 0.75 Yes 45 66.73 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 23501653 - NM_001130725 PSMB5 1 0.05 0.22 11 4.68 83 39 6.92 Yes 54 0.92 Yes 0 0 No -38 0.74 Yes 32 89.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23502421 - NM_001130725 PSMB5 1 0.07 0.24 13 10.27 83.73 41 6.86 Yes 39 1.04 Yes 0 0 No -40 0.87 Yes 30 95.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127156673 - NM_002799 PSMB7 1 0.12 0.64 28 10.75 89.42 32 5.62 Yes 19 1.38 Yes 0 0 No -31 0.64 No 39 65.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 127157770 - NM_002799 PSMB7 1 0.02 0.13 7 10.52 92.08 24 6.2 Yes 11 1.27 Yes 0 0 No -23 0.47 No 47 66.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 90730144 + NM_001330212 PSMC1 1 0.08 0.36 18 7.06 85.56 20 5.07 No 48 0.11 No 24 0.65 Yes -19 0.56 No 51 60.41 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 103003141 + NM_002803 PSMC2 1 0.13 0.58 27 -4.03 0 12 4.24 No 19 1.19 Yes 0 0 No -34 0.89 Yes 36 79.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 103008180 + NM_002803 PSMC2 1 0.03 0.17 8 2.16 67.56 30 5.47 No 51 0.75 No 0 0 No -47 0.66 No 23 82.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 47440525 - NM_002804 PSMC3 1 0.02 0.11 8 -6.2 0 11 4.12 No 39 -2.87 No 24 0.6 Yes -14 0.4 No 51 33.09 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr11 47440851 - NM_002804 PSMC3 1 0.03 0.13 7 4.99 84.15 23 4.05 No 68 1.6 Yes 0 0 No -22 0.64 No 48 71.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 47444541 - NM_002804 PSMC3 1 0.06 0.32 19 6.57 87.92 23 5.09 No 10 0.63 No 22 0.97 Yes -22 0.84 Yes 48 84.9 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47446805 - NM_002804 PSMC3 1 0.02 0.15 10 3.48 0 25 6.16 Yes 44 -1.33 No 31 0.81 Yes -24 0.77 Yes NA NA NA BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 47447498 - NM_002804 PSMC3 1 0.26 1.13 47 -4.45 0 36 4.6 No 3 0.33 No 31 0.43 Yes -28 0.26 No 40 46.44 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 40726353 - NR_045670 PSMC3IP 1 0.25 0.18 12 9.41 87.67 28 5.56 Yes 71 0.34 No 27 0.89 Yes -27 0.93 Yes 43 95.6 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 40478278 + NM_006503 PSMC4 1 0.09 0.36 21 -0.59 68.31 33 5.88 Yes 76 1.79 Yes 0 0 No -36 0.67 Yes 34 85.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40478368 + NM_006503 PSMC4 1 1.17 4.33 70 3.47 89.24 25 5.2 No 33 -2.6 No 24 0.92 Yes -24 0.85 Yes 46 70.64 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 40480435 + NM_006503 PSMC4 1 0.12 0.56 27 0.05 0 25 5.57 Yes 73 -3.19 No 0 0 No -24 0.74 Yes 46 75.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 40486142 + NM_006503 PSMC4 1 0.02 0.11 7 3.98 80.95 21 5.2 No 8 -1.18 No 0 0 No -20 0.79 Yes 50 77.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 40486542 + NM_006503 PSMC4 1 0.05 0.25 15 5.68 78.21 15 5.37 No 22 0.6 No 24 0.57 Yes -28 0.53 No 42 53.54 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 40487100 + NM_006503 PSMC4 1 0.04 0.19 13 -15.51 65.46 21 5.91 Yes 8 1.21 Yes 0 0 No -20 0.7 Yes 44 52.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 61908084 + NM_001199163 PSMC5 1 0.13 0.93 39 4.03 70.35 37 7.28 Yes 24 1.5 Yes 0 0 No -36 0.8 Yes 34 90.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 61908379 + NM_001199163 PSMC5 1 1.16 2.49 66 1.35 74.88 20 4.79 No 51 -4.5 No 19 0.94 Yes -19 0.77 Yes 51 77.09 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 53176292 + NM_002806 PSMC6 1 1.81 8.79 72 10.11 91.7 27 5.48 No 50 1.03 Yes 26 0.98 Yes -26 0.9 Yes 44 95.29 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 53178129 + NM_002806 PSMC6 1 0.03 0.15 9 -9.46 0 33 5.98 Yes 38 0.12 No 0 0 No -32 0.6 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 53184778 + NM_002806 PSMC6 1 0.03 0.13 8 1.28 64.68 49 7.62 Yes 36 0.73 No 26 0.91 Yes -36 0.75 Yes 34 84.4 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 53184957 + NM_002806 PSMC6 1 0.04 0.13 9 0.71 0 17 4.45 No 19 0.83 Yes 0 0 No -36 0.74 Yes 34 66.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 53190476 + NM_002806 PSMC6 1 0.1 0.38 20 5.59 78.09 20 6.04 Yes 7 0.98 Yes 0 0 No -30 0.44 No 40 65.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 53190522 + NM_002806 PSMC6 1 0.47 1.56 51 4.93 83.19 30 6.72 Yes 17 1.36 Yes 0 0 No -29 0.94 Yes 41 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 53190666 + NM_002806 PSMC6 1 0.04 0.14 8 4.42 71.39 30 4.99 No 9 1.07 Yes 24 0.9 Yes -21 0.83 Yes 49 90.7 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 231926699 + NM_002807 PSMD1 1 0.04 0.13 8 8.22 72.62 49 6.94 Yes 27 -2.16 No 0 0 No -34 0.66 No 36 68.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 231927221 + NM_002807 PSMD1 1 0.05 0.13 7 -5.88 78.48 34 4.77 No 1 1.1 Yes 0 0 No -27 0.51 No 49 60.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 231928563 + NM_002807 PSMD1 1 0.03 0.14 9 7.46 88.24 27 7.25 Yes 32 0.63 No 0 0 No -40 0.65 No 44 71.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 231928720 + NM_002807 PSMD1 1 0.08 0.29 16 5.39 85.57 28 4.68 No 47 0.26 No 0 0 No -28 0.54 No 42 66.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 231944251 + NM_002807 PSMD1 1 0.03 0.13 9 -7.97 80.71 30 7.52 Yes 72 0.98 Yes 0 0 No -29 0.68 Yes 41 78.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231950765 + NM_002807 PSMD1 1 0.06 0.14 8 11.25 86.44 30 5.66 Yes 52 1.08 Yes 0 0 No -25 0.55 No 45 77.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 232017430 + NM_002807 PSMD1 1 0.79 1.96 60 8.52 87.9 28 4.74 No 8 0.41 No 0 0 No -27 0.91 Yes 43 92.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 232031094 + NM_002807 PSMD1 1 0.25 0.96 38 7.58 83.34 19 5.74 Yes 6 1.26 Yes 0 0 No -18 0.57 No 52 62.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 232031114 + NM_002807 PSMD1 1 0.19 0.67 35 5.09 76.22 23 5.39 No 26 1.42 Yes 0 0 No -26 0.54 No 48 75.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 30774477 + NM_001270482 PSMD11 1 0.03 0.13 7 8.92 87 26 4.59 No 9 1.65 Yes 0 0 No -21 0.95 Yes 49 96.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30781769 + NM_001270482 PSMD11 1 0.08 0.35 18 2.27 76.7 11 4.9 No 42 -5.08 No 24 0.67 Yes -22 0.68 Yes 48 48.82 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 30781785 + NM_001270482 PSMD11 1 0.07 0.28 16 9.71 96.01 24 4.91 No 11 0.09 No 0 0 No -26 0.85 Yes 44 88.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 30801786 + NM_001270482 PSMD11 1 0.04 0.22 15 2.8 0 29 5.57 Yes 16 1.01 Yes 0 0 No -28 0.9 Yes 42 94.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30804542 + NM_001270482 PSMD11 1 0.07 0.36 20 1.44 0 38 6.69 Yes 15 0.52 No 0 0 No -27 0.81 Yes 43 87.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 30807557 + NM_001270482 PSMD11 1 0.06 0.33 19 2.52 68.39 23 6.32 Yes 10 0.93 Yes 0 0 No -22 0.81 Yes 48 86.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 65338372 - NM_001316341 PSMD12 1 0.08 0.33 21 -1.53 0 11 4.12 No 38 1.15 Yes 0 0 No -50 0.58 No 20 89.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 65338377 - NM_001316341 PSMD12 1 0.06 0.15 11 -6.37 0 46 7.82 Yes 33 1.16 Yes 0 0 No -36 0.48 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65340929 - NM_001316341 PSMD12 1 0.09 0.21 12 7.15 91.07 18 5.37 No 36 1.02 Yes 23 0.55 Yes -25 0.5 No 45 38.03 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr17 65343358 - NM_001316341 PSMD12 1 0.05 0.14 9 -5.99 0 13 4.24 No 67 1.14 Yes 0 0 No -44 0.33 No 26 66.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 65351539 - NM_001316341 PSMD12 1 0.1 0.29 15 9.92 90.94 23 5.81 Yes 14 0.45 No 22 0.75 Yes -27 0.55 No 43 70.16 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 248708 + NM_002817 PSMD13 1 0.06 0.31 18 -2.62 77.28 44 7.8 Yes 31 0.08 No 0 0 No -32 0.5 No 38 45.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 249008 + NM_002817 PSMD13 1 0.1 0.6 28 6.35 79.17 41 4.52 No 10 1.45 Yes 0 0 No -26 0.7 Yes 44 81.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 162182569 + NM_005805 PSMD14 1 0.15 0.83 38 7.78 84.22 20 7.65 Yes 7 0.49 No 0 0 No -22 0.61 No 48 46.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 162196031 + NM_005805 PSMD14 1 0.07 0.36 18 3.22 84.41 30 8.8 Yes 17 1.18 Yes 0 0 No -29 0.89 Yes 41 94.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 162203295 + NM_005805 PSMD14 1 0.05 0.29 16 4.69 69.23 52 6.7 Yes 14 1.08 Yes 0 0 No -26 0.9 Yes 44 93.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 162212087 + NM_005805 PSMD14 1 0.28 1.49 51 9.69 84.5 57 8.61 Yes 44 1.95 Yes 0 0 No -42 0.9 Yes 28 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 162224001 + NM_005805 PSMD14 1 0.02 0.14 7 2.8 71.12 16 4.68 No 17 0.82 Yes 0 0 No -39 0.39 No 31 47.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 162228506 + NM_005805 PSMD14 1 0.2 0.94 40 10.4 85.32 37 6.98 Yes 73 2.26 Yes 0 0 No -36 0.74 Yes 34 74.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 162256779 + NM_005805 PSMD14 1 0.04 0.22 11 12.21 89.33 55 6.98 Yes 66 -0.79 No 0 0 No -32 0.54 No 27 65.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 162258310 + NM_005805 PSMD14 1 0.03 0.17 11 8.92 92.41 24 6.61 Yes 11 0.7 No 0 0 No -23 0.74 Yes 47 76.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 184019558 + NM_001278708 PSMD2 1 0.1 0.65 32 4.13 79.55 20 5.09 No 54 0.07 No 22 0.8 Yes -22 0.62 No 51 70.73 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr3 184019645 + NM_001278708 PSMD2 1 0.26 1.57 54 -1.86 0 20 4.47 No 36 1.01 Yes 22 0.87 Yes -32 0.55 No 38 65.27 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 184020708 + NM_001278708 PSMD2 1 0.01 0.1 7 3.48 76.57 21 4.9 No 20 2.17 Yes 0 0 No -20 0.84 Yes 50 90.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 184021188 + NM_001278708 PSMD2 1 0.07 0.31 17 1.33 80.47 41 8.17 Yes 28 0.56 No 0 0 No -43 0.44 No 30 44.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 184023636 + NM_001278708 PSMD2 1 0.14 0.72 36 7.46 83.61 19 5.66 Yes 6 1.21 Yes 28 0.49 Yes -30 0.57 No 52 63.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 184025439 + NM_001278708 PSMD2 1 0.04 0.26 15 1.89 68.43 30 6.84 Yes 17 1.28 Yes 0 0 No -33 0.47 No 38 43.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 184026245 + NM_001278708 PSMD2 1 0.03 0.17 10 1.28 0 12 4.24 No 24 1.37 Yes 0 0 No -37 0.77 Yes 33 84.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 184026499 + NM_001278708 PSMD2 1 0.08 0.28 15 1.64 0 71 5.5 No 58 0.75 No 0 0 No -34 0.59 No 36 84.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 38143486 + NM_002809 PSMD3 1 0.05 0.19 10 4.62 78.96 41 6.71 Yes 28 1.11 Yes 0 0 No -26 0.32 No 30 34.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38152953 + NM_002809 PSMD3 1 0.06 0.38 18 10.3 91.97 36 5.99 Yes 52 0.64 No 22 0.88 Yes -22 0.5 No 35 83.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr17 38153399 + NM_002809 PSMD3 1 0.02 0.14 8 8.67 89.49 17 5.53 No 4 0.03 No 0 0 No -30 0.39 No 54 42.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151227827 + NM_002810 PSMD4 1 0.05 0.26 16 7.92 86.97 27 5.6 Yes 44 1.07 Yes 0 0 No -32 0.58 No 38 84.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 151231544 + NM_002810 PSMD4 1 0.03 0.18 9 -3.23 47.71 34 6.14 Yes 21 0.44 No 0 0 No -33 0.48 No 37 27.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151234648 + NM_002810 PSMD4 1 0.03 0.14 8 -1.25 0 17 3.41 No 9 0 No 0 0 No -49 0.65 No 21 81.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 151234684 + NM_002810 PSMD4 1 0.14 0.78 33 2.99 92.07 10 5 No -3 0.41 No 0 0 No -29 0.36 No 52 41.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151237210 + NM_002810 PSMD4 1 0.02 0.19 12 3.32 80.4 22 4.8 No 26 0.54 No 0 0 No -21 0.76 Yes 49 72.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 151237319 + NM_002810 PSMD4 1 0.02 0.14 10 -0.46 0 18 4.58 No 29 0.91 Yes 0 0 No -41 0.78 Yes 29 93.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151238506 + NM_002810 PSMD4 1 0.03 0.1 7 -5.89 0 33 6 Yes 37 1.01 Yes 19 0.54 Yes -32 0.92 Yes 38 91.76 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 151238997 + NM_002810 PSMD4 1 0.03 0.15 10 -4.44 75.36 18 5.22 No 5 2.3 Yes 26 0.8 Yes -26 0.6 No 44 58.21 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 151239522 + NM_002810 PSMD4 1 0.02 0.15 10 2.86 76.02 27 6.7 Yes 14 2.01 Yes 0 0 No -26 0.7 Yes 44 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151239651 + NM_002810 PSMD4 1 0.03 0.14 9 -9.07 75.14 21 5.64 Yes 51 1.69 Yes 0 0 No -20 0.83 Yes 50 64.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 123597980 - NM_001270427 PSMD5 1 0.72 0.5 28 6.62 85.02 28 5.29 No 29 -0.99 No 0 0 No -27 0.53 No 19 59.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123598001 - NM_001270427 PSMD5 1 0.18 0.13 8 2.23 0 31 5.09 No 69 1.34 Yes 0 0 No -30 0.71 Yes 40 63.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 123604691 - NM_001270427 PSMD5 1 0.18 0.14 10 7.83 93.46 31 5.57 Yes 18 0.3 No 0 0 No -30 0.91 Yes 40 97.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123607842 + NR_024408 PSMD5-AS1 1 6.24 0.35 16 9.19 89.35 22 4.96 No -3 0.27 No 0 0 No -21 0.94 Yes 49 94.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 64004623 - NM_001271780 PSMD6 1 0.33 1.56 52 8.02 79.23 39 6.57 Yes 36 0.12 No 0 0 No -29 0.88 Yes 41 95.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 74333469 + NM_002811 PSMD7 1 0.25 0.64 32 5.45 86.16 20 5.1 No 7 0.9 Yes 23 0.78 Yes -19 0.81 Yes 51 91.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 74335456 + NM_002811 PSMD7 1 0.11 0.67 29 4.6 0 22 5.91 Yes 69 1.77 Yes 0 0 No -21 0.52 No 49 63.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 74336267 + NM_002811 PSMD7 1 0.06 0.42 23 12.6 96.97 27 5.48 No 14 0.69 No 0 0 No -26 0.6 No 47 69.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 74338186 + NM_002811 PSMD7 1 0.03 0.18 11 -4.27 0 35 5.26 No 74 -4 No 22 0.51 Yes -34 0.76 Yes 59 33.08 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr16 74339188 + NM_002811 PSMD7 1 0.03 0.11 7 -11.84 63.91 42 6.19 Yes 29 2.19 Yes 0 0 No -19 0.61 No 29 71.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 74339197 + NM_002811 PSMD7 1 0.02 0.1 7 -10.85 0 19 3.1 No 38 2.17 Yes 0 0 No -50 0.51 No 20 66.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 38872392 + NM_002812 PSMD8 1 0.02 0.15 8 0.46 65.07 63 8.49 Yes 50 1.56 Yes 0 0 No -57 0.87 Yes 13 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38873036 + NM_002812 PSMD8 1 0.08 0.65 25 8.37 88.22 23 4.9 No 10 1.69 Yes 0 0 No -22 0.87 Yes 48 93.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38873896 + NM_002812 PSMD8 1 0.08 0.69 36 -9.4 0 23 7.48 Yes 10 1.7 Yes 0 0 No -22 0.76 Yes 32 51.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 38873927 + NM_002812 PSMD8 1 0.01 0.11 7 0.57 68.05 34 6.05 Yes 41 1.68 Yes 0 0 No -53 0.71 Yes 17 54.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 122328398 + NM_002813 PSMD9 1 0.11 0.15 10 -0.14 0 47 4.92 No 63 0.56 No 0 0 No -41 0.67 Yes 29 57.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 122352897 + NM_002813 PSMD9 1 0.16 0.22 12 10.15 88.07 25 5.28 No 22 0.64 No 0 0 No -24 0.71 Yes 46 75.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 122353764 + NM_002813 PSMD9 1 4.48 6.78 72 1.67 79.31 17 3.72 No 29 0.58 No 29 0.49 Yes -21 0.68 Yes 49 41.35 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 24605859 + NM_176783 PSME1 1 0.01 0.13 8 9.79 88.15 44 6.01 Yes 31 -0.09 No 0 0 No -24 0.58 No 46 73.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 24605892 + NM_176783 PSME1 1 0.01 0.13 7 6.55 81.72 25 5.56 Yes 12 0.98 Yes 0 0 No -24 0.91 Yes 46 92.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24605941 + NM_176783 PSME1 1 0.03 0.29 17 6.84 86.92 28 5.85 Yes 15 1.04 Yes 0 0 No -27 0.95 Yes 43 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24605996 + NM_176783 PSME1 1 0.01 0.17 9 7.87 76.86 17 5.72 Yes 33 1.11 Yes 0 0 No -32 0.35 No 54 57.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24606069 + NM_176783 PSME1 1 0.27 3.04 68 10.19 91.51 32 5.21 No NA NA NA 27 0.94 Yes -24 0.84 Yes 46 90.13 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24606106 + NM_176783 PSME1 1 0.1 1.11 47 11.47 84.24 28 5.65 Yes 27 -1.11 No 27 0.94 Yes -27 0.89 Yes 43 69.09 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 24606298 + NM_176783 PSME1 1 0.1 1.19 48 8.76 74.6 21 5.18 No 8 1.16 Yes 0 0 No -20 0.57 No 50 63.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24606532 + NM_176783 PSME1 1 0.01 0.11 7 -14.27 63.51 34 5.83 Yes 21 2.06 Yes 0 0 No -33 0.74 Yes 37 74.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24606729 + NM_176783 PSME1 1 0.01 0.14 8 -15 0 24 5.07 No 17 1.45 Yes 0 0 No -23 0.95 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 24607407 + NM_176783 PSME1 1 0.03 0.29 17 -6.66 80.66 31 7.22 Yes 66 0.81 Yes 0 0 No -36 0.69 Yes 40 71.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24607410 + NM_176783 PSME1 1 0.04 0.39 21 -4.45 0 9 3.87 No 69 0.8 Yes 0 0 No -39 0.67 Yes 37 62.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 24607697 + NM_176783 PSME1 1 0.02 0.31 18 1.64 73.54 12 4.71 No 70 -5.33 No 0 0 No -22 0.65 No 38 50.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24607944 + NM_176783 PSME1 1 0.11 1.44 50 8.58 80.38 24 5.91 Yes 11 2.28 Yes 23 0.95 Yes -23 0.68 Yes 47 68.91 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 24612884 - NM_002818 PSME2 1 0.02 0.33 18 -5.45 0 24 5.1 No 11 1.7 Yes 26 0.97 Yes -23 0.85 Yes NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr14 24612901 - NM_002818 PSME2 1 0.06 1.07 41 0.38 64.51 31 5.48 No 48 1.37 Yes 26 0.97 Yes -30 0.5 No 40 84.76 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr14 24612943 - NM_002818 PSME2 1 0.01 0.22 10 4.55 77.87 19 5.42 No 75 1.89 Yes 0 0 No -24 0.83 Yes 46 83.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24613463 - NM_002818 PSME2 1 0.01 0.22 13 -9.57 0 14 3.87 No 71 -2.87 No 0 0 No -41 0.41 No 29 67.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24613466 - NM_002818 PSME2 1 0.05 1.22 45 -9.13 63.76 36 6.4 Yes 68 -2.87 No 0 0 No -38 0.5 No 32 72.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 24614329 - NM_002818 PSME2 1 0.03 0.28 15 -9.22 0 31 6.08 Yes 43 1.22 Yes 0 0 No -31 0.5 No 40 36.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24614508 - NM_002818 PSME2 1 0.01 0.14 9 5.61 76.64 13 5.68 Yes 0 1.22 Yes 28 0.88 Yes -22 0.91 Yes 48 82.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24614672 - NM_002818 PSME2 1 0.15 3.44 70 -15.76 69.58 22 4.64 No 34 -3.26 No 0 0 No -21 0.89 Yes 49 86.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 24614962 - NM_002818 PSME2 1 0.07 1.01 42 2.81 84.36 17 4.8 No 37 0.9 Yes 28 0.66 Yes -24 0.43 No 54 38.58 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 24615106 - NM_002818 PSME2 1 0.9 13.63 72 9 95.03 18 4.9 No 36 2.26 Yes 33 0.83 Yes -48 0.5 No 43 47.1 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 24615106 - NM_002818 PSME2 1 0.01 0.15 8 9 95.03 18 4.9 No 36 2.26 Yes 33 0.83 Yes -48 0.5 No 43 47.1 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr14 24615121 - NM_002818 PSME2 1 0.05 0.68 32 -7.7 0 16 4.36 No 21 2.25 Yes 33 0.83 Yes -33 0.77 Yes 37 79.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr14 24615606 - NM_002818 PSME2 1 0.01 0.15 8 2.17 71.8 20 5.91 Yes 56 -1.47 No 0 0 No -28 0.5 No 42 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 24615632 - NM_002818 PSME2 1 0.01 0.28 16 4.46 66.82 25 5.34 No 68 -3.77 No 0 0 No -24 0.41 No 48 35.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40986535 + NM_001330229 PSME3 1 0.16 0.83 36 3.42 0 33 5.91 Yes 20 0.51 No 29 0.76 Yes -32 0.85 Yes 38 93.31 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 40990708 + NM_001330229 PSME3 1 0.49 2.64 62 3.65 81.15 24 6.24 Yes 47 1.03 Yes 23 0.87 Yes -23 0.81 Yes 47 58.46 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr17 40991130 + NM_001330229 PSME3 1 0.03 0.14 9 -6.28 0 44 6.95 Yes 51 0.38 No 0 0 No -30 0.89 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 54091846 - NM_014614 PSME4 1 0.07 0.13 8 10.49 93.09 40 6.11 Yes 35 1.35 Yes 0 0 No -39 0.36 No 35 59.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 54092290 - NM_014614 PSME4 1 1.66 3.08 66 4.47 70.81 46 5.96 Yes 56 0.85 Yes 0 0 No -40 0.61 No 25 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 54092660 - NM_014614 PSME4 1 0.12 0.21 11 5.46 85.85 39 6.32 Yes 26 0.86 Yes 0 0 No -38 0.68 Yes 32 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 54093326 - NM_014614 PSME4 1 0.1 0.18 10 6.4 77.73 33 6.55 Yes 20 0.09 No 0 0 No -27 0.82 Yes 43 85.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 54094016 - NM_014614 PSME4 1 0.06 0.1 7 -7.14 75.14 25 7.19 Yes 62 0.98 Yes 0 0 No -27 0.53 No 43 69.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 54098086 - NM_014614 PSME4 1 0.07 0.11 8 3.64 72.99 28 7.95 Yes 15 1.51 Yes 0 0 No -31 0.6 No 43 76.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 54115107 - NM_014614 PSME4 1 0.25 0.36 20 3.01 75.3 28 5.38 No 31 0.34 No 0 0 No -28 0.65 No 42 46.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 54129197 - NM_014614 PSME4 1 0.18 0.21 13 2.26 0 31 6.94 Yes 18 0.48 No 0 0 No -30 0.7 Yes 40 74.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 54133856 - NM_014614 PSME4 1 0.17 0.25 17 4.35 65.56 35 5.7 Yes 50 1.11 Yes 23 0.76 Yes -27 0.85 Yes 43 92.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 54135553 - NM_014614 PSME4 1 0.06 0.13 8 -22.25 0 38 7.43 Yes -3 0.37 No 0 0 No -9 0.82 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 54141069 - NM_014614 PSME4 1 4.77 7.32 71 9.07 86.56 21 5.66 Yes 76 0.71 No 0 0 No -20 0.8 Yes 50 71.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 54146382 - NM_014614 PSME4 1 0.08 0.15 9 1.08 83.92 27 7.07 Yes 70 -3.82 No 0 0 No -29 0.57 No 41 78.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 54153107 - NM_014614 PSME4 1 0.42 0.49 28 5.99 88.88 24 4.88 No 69 0.82 Yes 0 0 No -23 0.76 Yes 47 76.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 54169362 - NM_014614 PSME4 1 0.44 0.82 38 8.36 87.3 25 6.15 Yes 12 1.77 Yes 25 0.84 Yes -24 0.61 No 45 59.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 54170981 - NM_014614 PSME4 1 0.42 0.82 36 4.74 84.41 37 6.82 Yes 24 0.52 No 0 0 No -29 0.84 Yes 41 84.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 1108318 + NM_001323409 PSMF1 1 0.03 0.13 9 4.53 78.15 32 8.3 Yes 19 1.39 Yes 0 0 No -31 0.84 Yes 39 89.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 1117673 + NM_001323409 PSMF1 1 0.08 0.29 16 4.06 77.51 32 5.91 Yes 27 -2.62 No 0 0 No -31 0.89 Yes 39 94.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 1125559 + NM_001323409 PSMF1 1 0.07 0.24 13 10.45 88.27 22 7.96 Yes 9 1.03 Yes 0 0 No -30 0.43 No 40 63.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 1126950 + NM_001323409 PSMF1 1 0.3 1.04 40 9.87 92.63 23 5.2 No 10 0.95 Yes 0 0 No -22 0.48 No 48 78.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 1133011 + NM_001323409 PSMF1 1 0.29 1.01 38 4.34 71.81 17 4.06 No 28 0.12 No 0 0 No -33 0.54 No 40 62.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 1143775 + NM_001323409 PSMF1 1 0.03 0.11 7 -15.39 0 24 5.83 Yes 11 1.2 Yes 0 0 No -23 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 1145035 + NM_001323409 PSMF1 1 0.03 0.14 9 6.72 86.18 13 5.15 No 0 1.74 Yes 0 0 No -16 0.45 No 54 66.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 1146870 + NM_001323409 PSMF1 1 8.79 0.53 27 7.21 80.4 30 8.12 Yes 17 0.79 Yes 29 0.88 Yes -29 0.89 Yes 41 93.31 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 40550495 - NM_001320795 PSMG1 1 0.12 0.31 17 2.46 73.66 44 7.41 Yes 31 0.5 No 0 0 No -34 0.65 No 36 76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 40550550 - NM_001320795 PSMG1 1 0.1 0.25 13 -3.81 0 32 5.67 Yes 57 0.53 No 0 0 No -31 0.82 Yes 39 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 40551893 - NM_001320795 PSMG1 1 0.1 0.22 12 3.12 0 30 5.38 No 17 0.26 No 0 0 No -29 0.79 Yes 41 82.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 40551898 - NM_001320795 PSMG1 1 1.54 3.19 62 6.28 90.54 25 4.9 No 12 0.28 No 0 0 No -24 0.87 Yes 46 88.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 40552333 - NM_001320795 PSMG1 1 0.08 0.19 11 4.31 83.28 35 6.15 Yes 42 1.28 Yes 0 0 No -34 0.66 No 38 57.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 12707912 + NM_147163 PSMG2 1 0.08 0.29 14 8.27 87.58 25 6.16 Yes 63 1.73 Yes 0 0 No -24 0.7 Yes 46 62.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 12713786 + NM_147163 PSMG2 1 0.37 1.1 47 3.06 0 30 7.96 Yes 17 1.14 Yes 0 0 No -33 0.69 Yes 37 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 3264407 + NM_001128592 PSMG4 1 3.83 0.88 40 6.86 88.66 13 5.1 No 54 -2.74 No 22 0.9 Yes -22 0.87 Yes 48 86.03 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr6 3267828 + NM_001128592 PSMG4 1 3.72 0.94 43 3.75 0 25 5.45 No 52 -2.47 No 0 0 No -27 0.78 Yes 43 73.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 3267828 + NM_001128592 PSMG4 1 2.38 0.81 35 3.75 0 25 5.45 No 52 -2.47 No 0 0 No -27 0.78 Yes 43 73.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 20277490 - NM_001042414 PSPC1 1 0.09 0.17 12 -2.24 0 16 4.47 No 61 0.42 No 0 0 No -42 0.82 Yes 28 88.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 20281046 - NM_001042414 PSPC1 1 0.21 0.63 28 5.97 72.36 24 5.49 No 11 0.66 No 0 0 No -23 0.68 Yes 47 69.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 20295622 - NM_001042414 PSPC1 1 0.28 0.44 24 9.79 80.15 35 8.76 Yes 22 0.7 No 0 0 No -29 0.68 Yes 41 79.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 20300864 - NM_001042414 PSPC1 1 0.22 0.39 25 8.15 88.27 21 6.14 Yes 8 0.55 No 0 0 No -26 0.26 No 45 33.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 20301507 - NM_001042414 PSPC1 1 0.08 0.18 9 6.57 92.81 28 5.21 No 3 0.81 Yes 0 0 No -27 0.78 Yes 43 65.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 20302526 - NM_001042414 PSPC1 1 0.07 0.14 8 7.54 82.97 30 6.06 Yes 17 0.79 Yes 0 0 No -29 0.94 Yes 41 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20333834 - NM_001042414 PSPC1 1 0.32 0.93 36 6.15 80.12 21 7.21 Yes 8 1.24 Yes 0 0 No -20 0.83 Yes 50 89.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 56099671 - NM_004577 PSPH 1 2.37 1.03 44 8.82 83.27 17 4.72 No 30 -2.02 No 25 0.45 Yes -27 0.43 No 39 63.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 56099671 - NM_004577 PSPH 1 0.75 0.32 18 8.82 83.27 17 4.72 No 30 -2.02 No 25 0.45 Yes -27 0.43 No 39 63.18 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 56099969 - NM_004577 PSPH 1 0.62 0.28 14 5.47 85.93 27 5.48 No 55 1.02 Yes 0 0 No -26 0.93 Yes 44 96.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 56101184 - NM_004577 PSPH 1 0.47 0.22 14 3.99 0 64 7.47 Yes 39 0.47 No 0 0 No -54 0.5 No 16 60.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 56101188 - NM_004577 PSPH 1 11.27 5.22 70 10.37 95.65 60 7.33 Yes 35 0.49 No 27 0.79 Yes -50 0.5 No 20 56.19 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 77300187 + NM_001321137 PSTPIP1 1 0.76 0.15 8 7.4 78.87 23 7 Yes 10 1.62 Yes 22 0.9 Yes -22 0.85 Yes 48 87.44 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 77315910 + NM_001321137 PSTPIP1 1 0.88 0.22 11 5.53 71.45 26 6.56 Yes 67 -6.45 No 25 0.79 Yes -25 0.94 Yes 45 93.35 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr15 77316707 + NM_001321137 PSTPIP1 1 0.63 0.17 10 10.7 89.8 31 6.47 Yes NA NA NA 0 0 No -24 0.65 No 40 40.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 77318456 + NM_001321137 PSTPIP1 1 2.48 0.18 10 5.87 75.2 25 5.28 No 0 0.69 No 25 0.79 Yes -29 0.47 No 41 69.39 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 77320140 + NM_001321137 PSTPIP1 1 7.52 1.72 50 8.06 81.36 32 5.74 Yes 55 1 Yes 31 0.87 Yes -31 0.8 Yes 39 82.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr15 77321241 + NM_001321137 PSTPIP1 1 1.07 0.21 12 4.7 86.69 23 5.38 No 10 0.42 No 0 0 No -22 0.92 Yes 48 82.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 77328151 + NM_001321137 PSTPIP1 1 9.19 1.83 55 3.02 0 12 4.24 No 10 1.71 Yes 28 0.49 Yes -22 0.8 Yes 48 92.61 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 43573684 - NM_024430 PSTPIP2 1 0.27 0.13 7 2.59 68.2 37 6.89 Yes 57 1.17 Yes 20 0.49 Yes -35 0.46 No 35 55.65 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 72333482 - NM_001099666 PTAR1 1 54.7 3.96 71 5.98 90.06 22 5.65 Yes 9 1.2 Yes 22 0.78 Yes -21 0.92 Yes 49 90.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 72333482 - NM_001099666 PTAR1 1 2.97 0.25 14 5.98 90.06 22 5.65 Yes 9 1.2 Yes 22 0.78 Yes -21 0.92 Yes 49 90.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 72333482 - NM_001099666 PTAR1 1 1.13 0.11 8 5.98 90.06 22 5.65 Yes 9 1.2 Yes 22 0.78 Yes -21 0.92 Yes 49 90.42 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 72338492 - NM_001099666 PTAR1 1 0.43 0.11 8 3.29 79.29 60 7.65 Yes 67 1.05 Yes 31 0.48 Yes -27 0.68 Yes 43 70.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 72355693 - NM_001099666 PTAR1 1 2.25 1.04 39 4.02 82.48 23 7.35 Yes 10 0.91 Yes 0 0 No -22 0.81 Yes 48 90.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 72373172 - NM_001099666 PTAR1 1 1.65 0.46 26 1.89 0 30 6.93 Yes 17 1.04 Yes 0 0 No -29 0.69 Yes 41 66.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 72373621 - NM_001099666 PTAR1 1 13.35 3.36 68 6.46 85.57 25 5.08 No 58 2.09 Yes 24 0.97 Yes -24 0.96 Yes 46 98.49 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 803619 + NM_002819 PTBP1 1 0.24 2.78 60 0.89 77.98 50 7.28 Yes 10 1.8 Yes 0 0 No -22 0.61 No 48 77.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 803737 + NM_002819 PTBP1 1 0.01 0.13 8 9.24 85.66 43 8.77 Yes 30 0.17 No 0 0 No -42 0.45 No 28 61.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 804540 + NM_002819 PTBP1 1 0.11 0.63 33 -3.58 0 14 4.24 No 16 1.09 Yes 19 0.89 Yes -28 0.97 Yes 42 93.53 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 805512 + NM_002819 PTBP1 1 1.5 6.24 71 1.62 73.61 30 5.48 No 21 0.74 No 24 0.7 Yes -41 0.53 No 29 43.2 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 808379 + NM_002819 PTBP1 1 0.19 1.29 52 1.48 66.52 24 4.86 No -4 1.07 Yes 23 0.84 Yes -45 0.89 Yes 25 81.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 810697 + NM_002819 PTBP1 1 0.02 0.19 12 -1.22 0 21 7.07 Yes 8 2.38 Yes 0 0 No -20 0.85 Yes 50 74.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 810721 + NM_002819 PTBP1 1 0.02 0.17 10 -0.81 71.77 18 4.9 No 32 2.35 Yes 0 0 No -44 0.72 Yes 26 14.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 97244545 + NM_001300990 PTBP2 1 1.17 0.31 20 2.02 70.76 40 6.24 Yes 17 1.94 Yes 0 0 No -29 0.79 Yes 41 88.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 97278831 + NM_001300990 PTBP2 1 1.54 0.17 9 0.63 81.71 24 6.11 Yes 11 1.02 Yes 20 0.81 Yes -23 0.91 Yes 47 87.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 97278831 + NM_001300990 PTBP2 1 101.36 9.94 72 0.63 81.71 24 6.11 Yes 11 1.02 Yes 20 0.81 Yes -23 0.91 Yes 47 87.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr9 114982654 - NM_001244896 PTBP3 1 0.08 0.47 26 9.61 92 35 6.96 Yes 22 1.21 Yes 0 0 No -34 0.87 Yes 36 91.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 114982654 - NM_001244896 PTBP3 1 0.04 0.24 16 9.61 92 35 6.96 Yes 22 1.21 Yes 0 0 No -34 0.87 Yes 36 91.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 114986259 - NM_001244896 PTBP3 1 0.05 0.25 17 -1.91 0 38 6.62 Yes 25 0.89 Yes 0 0 No -43 0.65 No 33 69.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 114986270 - NM_001244896 PTBP3 1 0.05 0.22 15 -3.02 0 27 5.98 Yes 14 0.93 Yes 32 0.83 Yes -26 0.56 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 115007422 - NM_001244896 PTBP3 1 0.4 2.32 60 8.31 86.16 22 7.28 Yes 9 1.28 Yes 0 0 No -21 0.67 Yes 49 91.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115012663 - NM_001244896 PTBP3 1 0.03 0.18 11 5.58 69.4 22 4.39 No 9 0.85 Yes 0 0 No -21 0.59 No 40 59.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 115015067 - NM_001244896 PTBP3 1 0.06 0.26 15 -11.4 0 46 7.28 Yes 8 0.98 Yes 0 0 No -25 0.33 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 115038294 - NM_001244896 PTBP3 1 556.86 300.24 72 4.95 82.15 24 4.89 No -1 0.4 No 0 0 No -24 0.62 No 46 81.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 115038294 - NM_001244896 PTBP3 1 1.29 0.68 33 4.95 82.15 24 4.89 No -1 0.4 No 0 0 No -24 0.62 No 46 81.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 115083806 - NM_001244896 PTBP3 1 0.22 0.81 20 11.06 95.65 32 6.56 Yes 74 1.38 Yes 0 0 No -31 0.75 Yes 39 79.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 115092755 - NM_001244896 PTBP3 1 5.48 21.43 72 8.9 90.37 41 13.21 Yes 28 2.41 Yes 40 0.81 Yes -40 0.81 Yes 30 88.35 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr5 71616946 + NM_024754 PTCD2 1 2.82 0.65 29 10.09 93.68 34 6.31 Yes 73 1.68 Yes 0 0 No -33 0.53 No 37 71.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 71617147 + NM_024754 PTCD2 1 0.79 0.24 14 7.15 84.52 16 5.91 Yes 3 1.13 Yes 25 0.81 Yes -23 0.5 No 45 66.67 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 71625950 + NM_024754 PTCD2 1 1.84 0.47 22 7.95 92.4 26 7.55 Yes 13 1.47 Yes 0 0 No -25 0.94 Yes 45 95.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 71631540 + NM_024754 PTCD2 1 0.67 0.17 11 5.87 79.37 41 5.37 No 74 0.41 No 0 0 No -27 0.74 Yes 43 70.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 71640506 + NM_024754 PTCD2 1 0.59 0.24 13 7.21 76.37 29 5.57 Yes 16 0.64 No 0 0 No -28 0.93 Yes 42 98.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 86335454 + NM_017952 PTCD3 1 0.12 0.17 10 -3.96 0 16 4 No 23 0.04 No 20 0.46 Yes -22 0.8 Yes 48 57.52 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 86338912 + NM_017952 PTCD3 1 0.16 0.32 18 10.23 85.39 29 5.39 No 16 -0.1 No 28 0.81 Yes -28 0.66 No 42 56.63 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 86346666 + NM_017952 PTCD3 1 4.34 8.97 72 8.15 80.12 22 5.74 Yes 9 1.69 Yes 21 0.92 Yes -21 0.88 Yes 49 91.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 86346668 + NM_017952 PTCD3 1 0.13 0.26 16 -1.66 82.79 24 5.92 Yes 11 1.68 Yes 0 0 No -23 0.89 Yes 47 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86349024 + NM_017952 PTCD3 1 0.06 0.14 9 5 84.83 21 4.56 No 63 -5.83 No 0 0 No -23 0.61 No 47 64.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 86354286 + NM_017952 PTCD3 1 0.09 0.21 13 -10.38 70.52 34 6.16 Yes 73 0.73 No 0 0 No -27 0.44 No 43 56.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 86357773 + NM_017952 PTCD3 1 0.43 0.9 36 -11.39 73.67 30 6.46 Yes 17 0.55 No 0 0 No -29 0.64 No 41 73.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 86359454 + NM_017952 PTCD3 1 0.07 0.17 10 5.97 85.41 17 4.8 No 27 0.87 Yes 0 0 No -33 0.62 No 37 87.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 86361418 + NM_017952 PTCD3 1 2.32 4.14 68 1.7 0 34 6.09 Yes 21 1.14 Yes 26 0.73 Yes -33 0.67 Yes 40 73.21 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 86361445 + NM_017952 PTCD3 1 0.7 1.29 47 7.49 82.56 26 5.53 No 48 1.11 Yes 0 0 No -25 0.68 Yes 45 64.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 86361967 + NM_017952 PTCD3 1 0.53 1.01 41 0.27 0 9 3.87 No 11 1.63 Yes 0 0 No -23 0.73 Yes 47 86.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86363789 + NM_017952 PTCD3 1 0.48 0.75 38 5.54 82.08 31 5.81 Yes 27 -0.66 No 0 0 No -30 0.45 No 40 71.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 86363820 + NM_017952 PTCD3 1 0.18 0.31 16 5.19 88.69 18 5.47 No 5 0.31 No 0 0 No -25 0.45 No 47 44.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 86364107 + NM_017952 PTCD3 1 1.02 1.6 56 0.2 77.1 26 6.08 Yes 13 0.89 Yes 0 0 No -25 0.95 Yes 45 95.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 98238437 - NM_001083607 PTCH1 1 0.73 0.18 12 3.53 0 30 6 Yes 60 1.23 Yes 0 0 No -29 0.96 Yes 41 96.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 98262951 - NM_001083607 PTCH1 1 1.43 0.29 19 12.2 90.54 28 6.85 Yes 38 1 Yes 0 0 No -27 0.37 No 43 78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 97316831 + NM_014754 PTDSS1 1 0.02 0.1 7 6.43 79.38 22 4.76 No 47 0.96 Yes 0 0 No -28 0.85 Yes 42 93.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 97333047 + NM_014754 PTDSS1 1 0.12 0.49 25 9.12 94.98 29 6.32 Yes 35 0.17 No 0 0 No -28 0.66 Yes 47 54.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 97340941 + NM_014754 PTDSS1 1 0.09 0.38 19 -0.76 76.81 21 4.9 No 66 -0.57 No 0 0 No -20 0.82 Yes 50 75.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 97340944 + NM_014754 PTDSS1 1 0.06 0.28 14 1.75 78.23 24 5.2 No 69 -0.57 No 0 0 No -23 0.85 Yes 47 78.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 460760 + NM_001329548 PTDSS2 1 2.21 0.6 30 5.82 88.79 16 5.1 No 3 0.81 Yes 24 0.64 Yes -23 0.61 No 47 66.04 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 463567 + NM_001329548 PTDSS2 1 1.73 0.43 25 9.61 95.65 17 5.38 No 26 0.91 Yes 0 0 No -22 0.73 Yes 48 76.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 464904 + NM_001329548 PTDSS2 1 0.67 0.22 14 2.72 71.25 128 7.9 Yes 33 -2.4 No 0 0 No -25 0.42 No 45 57.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 470387 + NM_001329548 PTDSS2 1 0.95 0.24 14 7.24 78.47 26 5.39 No 13 0.16 No 0 0 No -25 0.9 Yes 45 91.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 474739 + NM_001329548 PTDSS2 1 0.93 0.31 17 9.16 93.64 27 5.48 No 11 -0.87 No 0 0 No -26 0.75 Yes 44 83.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 480124 + NM_001329548 PTDSS2 1 0.72 0.26 17 11.27 83.29 25 5.57 Yes 71 1.37 Yes 24 0.89 Yes -24 0.83 Yes 46 90.48 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 486890 + NM_001329548 PTDSS2 1 2.22 0.9 37 6.16 74.15 30 4.69 No 3 0.85 Yes 0 0 No -22 0.25 No 48 43.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 486909 + NM_001329548 PTDSS2 1 0.48 0.17 10 2.32 65.12 23 5.29 No 22 0.83 Yes 21 0.92 Yes -22 0.25 No 63 21.51 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 490009 + NM_001329548 PTDSS2 1 0.73 0.14 9 7.57 82.75 31 7.55 Yes 18 2.39 Yes 0 0 No -30 0.97 Yes 40 94.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89653774 + NM_001304718 PTEN 1 0.02 0.14 7 3.27 74.86 25 5.57 Yes 55 1.41 Yes 0 0 No -24 0.71 Yes 46 50.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89666304 + NM_001304718 PTEN 1 2.89 0.14 9 8.36 86.93 30 5.39 No 47 0.61 No 0 0 No -29 0.51 No 46 53.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89669244 + NM_001304718 PTEN 1 7.24 0.33 17 6.47 85.38 25 5.2 No 12 0.97 Yes 0 0 No -24 0.96 Yes 46 96.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89673142 + NM_001304718 PTEN 1 4.2 0.22 11 12.35 98.1 37 6.38 Yes 24 1.05 Yes 0 0 No -36 0.78 Yes 34 73.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89682219 + NM_001304718 PTEN 1 51.08 3.18 65 13.23 88.11 24 6.16 Yes 11 1.59 Yes 0 0 No -23 0.83 Yes 47 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89685269 + NM_001304718 PTEN 1 9651.19 601.03 72 10.29 88.77 35 7.25 Yes 22 1.1 Yes 34 0.73 Yes -34 0.89 Yes 36 91.68 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 89691656 + NM_001304718 PTEN 1 0.05 0.47 25 8.22 82.71 23 5.19 No 15 -1.34 No 0 0 No -27 0.71 Yes 43 77.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89691758 + NM_001304718 PTEN 1 0.02 0.21 11 2.77 68.67 37 4.89 No 5 0.79 Yes 0 0 No -36 0.58 No 34 66.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89691772 + NM_001304718 PTEN 1 0.15 1.4 52 2.72 84.46 19 4.24 No 19 1.06 Yes 0 0 No -24 0.43 No 46 57.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89691775 + NM_001304718 PTEN 1 0.12 1.03 41 -1.25 73.21 22 4.51 No 22 1.06 Yes 0 0 No -21 0.46 No 46 45.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89692025 + NM_001304718 PTEN 1 0.02 0.21 15 1.12 68.13 37 6.24 Yes 24 0.81 Yes 0 0 No -36 0.76 Yes 34 74.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89692751 + NM_001304718 PTEN 1 1.55 13.96 72 3.27 84.68 26 5.38 No 41 0.85 Yes 26 0.89 Yes -25 0.89 Yes 45 91.32 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 89692790 + NM_001304718 PTEN 1 0.02 0.14 8 4.6 78.82 29 5.45 No 29 0.7 No 0 0 No -28 0.59 No 45 59.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89710825 + NM_001304718 PTEN 1 24.02 1.35 51 8.91 83.4 30 7.46 Yes 17 0.18 No 0 0 No -29 0.76 Yes 41 90.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89710825 + NM_001304718 PTEN 1 3.46 0.25 12 8.91 83.4 30 7.46 Yes 17 0.18 No 0 0 No -29 0.76 Yes 41 90.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89717465 + NM_001304718 PTEN 1 0.02 0.14 7 9.08 88.71 34 6.72 Yes 76 1 Yes 0 0 No -33 0.74 Yes 37 86.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89717552 + NM_001304718 PTEN 1 0.03 0.21 10 5.21 82.04 30 6.66 Yes 17 0.42 No 0 0 No -23 0.85 Yes 47 81.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89717663 + NM_001304718 PTEN 1 0.17 1.24 44 7.75 89.66 29 5.1 No 51 0.41 No 0 0 No -28 0.82 Yes 48 53.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89718259 + NM_001304718 PTEN 1 0.05 0.43 26 9.39 91.79 26 6.08 Yes 13 1.27 Yes 0 0 No -25 0.87 Yes 45 94.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89723131 + NM_001304718 PTEN 1 0.38 1.58 54 8.47 85.89 31 6.4 Yes 18 0.22 No 0 0 No -30 0.82 Yes 40 88.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 16479361 + NM_001001484 PTER 1 2.05 0.4 23 4.11 0 9 3.87 No 19 0.99 Yes 0 0 No -34 0.42 No 36 67.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 16490478 + NM_001001484 PTER 1 5.04 0.25 14 8.67 89.03 28 5.83 Yes 15 0.92 Yes 0 0 No -27 0.83 Yes 43 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 16482089 + NM_001001484 PTER 1 8.79 0.44 23 9.37 98.64 30 5.74 Yes 17 1.44 Yes 0 0 No -29 0.86 Yes 41 95.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 16490478 + NM_001001484 PTER 1 10.32 0.68 33 8.67 89.03 28 5.83 Yes 15 0.92 Yes 0 0 No -27 0.83 Yes 43 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 16497991 + NM_001001484 PTER 1 1.91 0.15 9 1.4 0 18 4.21 No 36 0.27 No 0 0 No -21 0.46 No 49 52.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 130884926 - NM_198938 PTGES2 1 0.56 0.96 42 6.94 82.66 56 8.66 Yes 43 1.93 Yes 29 0.25 Yes -55 0.62 No 15 73.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr9 130886127 - NM_198938 PTGES2 1 2.01 4.79 68 -0.54 0 26 6.48 Yes 71 -4.61 No 21 0.78 Yes -23 0.73 Yes 45 62.1 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 57058281 - NM_001282603 PTGES3 1 0.12 1.4 47 -10.84 0 25 7.47 Yes 12 1.22 Yes 0 0 No -24 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 57058282 - NM_001282603 PTGES3 1 0.15 1.68 55 -12.54 0 24 7.41 Yes 11 1.22 Yes 0 0 No -23 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 57059572 - NM_001282603 PTGES3 1 0.13 0.94 38 -2.52 0 19 4.58 No 26 0.58 No 0 0 No -18 0.8 Yes 52 46.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 57059588 - NM_001282603 PTGES3 1 0.21 1.49 52 3.16 63.73 23 6.33 Yes 10 0.61 No 0 0 No -30 0.41 No 40 66.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57066846 - NM_001282603 PTGES3 1 0.04 0.32 22 0.22 0 31 6.39 Yes 18 1.32 Yes 0 0 No -30 0.83 Yes 40 86.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57080702 - NM_001282603 PTGES3 1 0.97 8.85 70 11.65 87.07 31 5.92 Yes 75 0.76 No 0 0 No -31 0.34 No 40 61.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74329358 + NM_001146154 PTGR2 1 19.93 3.19 66 8.19 81.28 29 7.16 Yes 16 1.25 Yes 0 0 No -28 0.76 Yes 42 85.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74337377 + NM_001146154 PTGR2 1 3.04 0.44 27 7.41 91.26 45 7.28 Yes 56 0.66 No 0 0 No -23 0.34 No 26 54.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 74349085 + NM_001146154 PTGR2 1 0.65 0.1 7 -0.4 66.13 18 4.68 No 63 0.05 No 0 0 No -18 0.51 No 52 57.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 27193436 + NM_173175 PTK2B 1 0.08 0.14 8 4.64 89.56 27 5.38 No 44 -2.76 No 0 0 No -26 0.44 No 44 48.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 27211866 + NM_173175 PTK2B 1 0.47 0.68 35 5.77 81.78 24 6.59 Yes 11 0.98 Yes 0 0 No -23 0.75 Yes 47 78.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 27231403 + NM_173175 PTK2B 1 0.11 0.13 7 4.43 81.79 22 5.65 Yes 72 -6.45 No 0 0 No -21 0.73 Yes 49 75.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 27252825 + NM_173175 PTK2B 1 0.14 0.24 12 6.81 72.37 28 5.15 No 15 2.2 Yes 0 0 No -27 0.84 Yes 43 88.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 27261739 + NM_173175 PTK2B 1 0.92 5.13 67 9.56 91.06 33 6.82 Yes 12 1.68 Yes 0 0 No -24 0.58 No 50 75.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 27280152 + NM_173175 PTK2B 1 0.03 0.11 8 9.53 91.52 42 7.35 Yes 29 1.84 Yes 0 0 No -41 0.61 No 29 73.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 27288393 + NM_173175 PTK2B 1 0.02 0.1 7 -12.27 0 25 6.48 Yes 12 1.42 Yes 23 0.98 Yes -24 0.98 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr8 27288918 + NM_173175 PTK2B 1 0.33 1.33 52 0.5 0 30 5.76 Yes 53 -2.37 No 0 0 No -30 0.54 No 48 40.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 27292030 + NM_173175 PTK2B 1 0.03 0.13 9 -13.55 0 32 6.46 Yes 19 1.75 Yes 0 0 No -31 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 27293265 + NM_173175 PTK2B 1 0.03 0.13 7 -7.2 0 9 3.87 No 15 1.29 Yes 0 0 No -27 0.81 Yes 43 89.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 27294431 + NM_173175 PTK2B 1 0.04 0.14 9 4.53 82.26 20 5.9 Yes 37 0.85 Yes 0 0 No -19 0.76 Yes 51 68.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 27294639 + NM_173175 PTK2B 1 0.03 0.13 7 -18 0 20 6 Yes 7 0.87 Yes 0 0 No -19 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 27295987 + NM_173175 PTK2B 1 0.04 0.15 9 6.04 80.44 33 7.99 Yes 31 0.62 No 0 0 No -32 0.89 Yes 38 93.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 27297436 + NM_173175 PTK2B 1 0.04 0.19 12 5.64 86.29 17 4.8 No 71 -1.69 No 0 0 No -16 0.38 No 54 56.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 27297728 + NM_173175 PTK2B 1 0.05 0.19 11 7.73 86.44 12 4.12 No 42 -1.09 No 19 0.88 Yes -47 0.78 Yes 23 73.99 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 27297919 + NM_173175 PTK2B 1 0.03 0.11 7 0.2 67.67 59 8.43 Yes 46 1.65 Yes 0 0 No -29 0.39 No 12 38.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 27298820 + NM_173175 PTK2B 1 0.12 0.4 22 8.84 90.62 31 6.38 Yes -1 0.42 No 0 0 No -33 0.79 Yes 37 86.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 27301865 + NM_173175 PTK2B 1 0.05 0.18 11 7.49 80.79 23 5.45 No 10 1.1 Yes 0 0 No -22 0.73 Yes 36 57.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 27303310 + NM_173175 PTK2B 1 12.54 45.33 72 10.23 85.38 58 8.31 Yes 45 1.85 Yes 29 0.07 Yes -57 0.83 Yes 13 88.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 27308291 + NM_173175 PTK2B 1 0.06 0.21 13 1.15 70.51 15 5.25 No 50 1.09 Yes 0 0 No -57 0.7 Yes 13 74.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 27308959 + NM_173175 PTK2B 1 0.03 0.14 8 4.83 82.23 26 5 No 13 0.69 No 31 0.91 Yes -25 0.89 Yes 45 81.49 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 27310633 + NM_173175 PTK2B 1 0.05 0.19 11 -3.87 0 40 6.77 Yes 27 0.82 Yes 0 0 No -26 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 27312009 + NM_173175 PTK2B 1 0.29 1.06 47 6.36 74.52 27 5.74 Yes 65 -3.22 No 23 0.62 Yes -29 0.45 No 44 60.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 232576066 + NM_001099285 PTMA 1 0.01 0.82 36 -3.59 0 13 4.24 No 65 1.15 Yes 0 0 No -41 0.86 Yes 29 93.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 232576599 + NM_001099285 PTMA 1 0.04 0.32 19 -7.99 72.77 26 5.77 Yes 13 0.76 No 25 0.85 Yes -28 0.45 No 42 56.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 232576599 + NM_001099285 PTMA 1 944.71 7403.1 72 -7.99 72.77 26 5.77 Yes 13 0.76 No 25 0.85 Yes -28 0.45 No 42 56.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 232576600 + NM_001099285 PTMA 1 0.11 0.82 39 -17.94 0 27 5.84 Yes 14 0.76 No 0 0 No -29 0.47 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 232576671 + NM_001099285 PTMA 1 0.07 0.57 28 -25.39 0 9 3.87 No 56 -4.8 No 0 0 No -38 0.24 No 35 60.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 232577157 + NM_001099285 PTMA 1 0 0.11 7 -2.06 0 29 6.42 Yes 16 0.43 No 23 0.94 Yes -28 0.9 Yes 42 94.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 232577157 + NM_001099285 PTMA 1 0 0.38 23 -2.06 0 29 6.42 Yes 16 0.43 No 23 0.94 Yes -28 0.9 Yes 42 94.77 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 232577161 + NM_001099285 PTMA 1 0.01 1.21 47 -15.2 0 12 4.24 No 20 0.41 No 23 0.94 Yes -32 0.9 Yes 38 92.54 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 232577176 + NM_001099285 PTMA 1 0 0.21 13 -16.43 0 13 3.86 No 35 0.38 No 0 0 No -47 0.88 Yes 23 79.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 232577468 + NM_001099285 PTMA 1 0.01 0.49 16 -2.11 0 19 4.58 No 72 -1.14 No 0 0 No -18 0.81 Yes 52 61.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 232577498 + NM_001099285 PTMA 1 0.09 7.58 72 -2.35 69.27 16 4.69 No 36 -2.63 No 19 0.89 Yes -48 0.42 No 36 66.56 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 232577552 + NM_001099285 PTMA 1 0 0.32 18 -20.85 0 18 3.57 No 46 0.87 Yes 0 0 No -58 0.53 No 59 55.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 232577636 + NM_001099285 PTMA 1 0 0.42 18 8.35 84.3 30 6.43 Yes 17 2.01 Yes 0 0 No -29 0.7 Yes 41 61.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 6879531 + NM_001330333 PTMS 1 0.04 0.18 11 11.25 84.01 10 5.47 No NA NA NA 30 0.85 Yes -31 0.6 No 47 47.15 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 50355316 + NM_017432 PTOV1 1 0.39 0.17 11 1.13 66.42 16 4.66 No 29 -1.99 No 28 0.78 Yes -16 0.5 No 55 51.29 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 50360953 + NM_017432 PTOV1 1 0.08 0.1 7 -1.07 0 25 6.84 Yes NA NA NA 0 0 No -27 0.68 Yes 46 78.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 50361165 + NM_017432 PTOV1 1 0.12 0.19 12 -0.71 0 35 6.4 Yes 22 0.96 Yes 29 0.85 Yes -34 0.92 Yes 36 84.95 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 50363870 + NM_017432 PTOV1 1 672.91 115.94 72 8.99 83.33 20 5.74 Yes 38 -2.03 No 26 0.71 Yes -26 0.49 No 42 69.61 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr19 50362020 - NR_110730 PTOV1-AS2 1 2.22 0.15 9 8.44 82.36 25 4.7 No 18 0.1 No 0 0 No -19 0.54 No 51 50.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 64287482 + NM_003463 PTP4A1 1 0.04 0.26 12 4.66 81.8 31 6.69 Yes 18 0.47 No 0 0 No -30 0.48 No 40 60.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 64289163 + NM_003463 PTP4A1 1 0.01 0.14 10 -6.26 70.41 43 5.58 Yes 0 0.18 No 0 0 No -24 0.85 Yes 46 50.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 64289965 + NM_003463 PTP4A1 1 0.04 0.38 23 0.55 0 29 7.48 Yes 69 0.61 No 0 0 No -28 0.92 Yes 42 92.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 32374556 - NM_080391 PTP4A2 1 0.01 0.1 7 -5.66 0 9 3.87 No 47 0.22 No 0 0 No -30 0.37 No 40 37.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32374560 - NM_080391 PTP4A2 1 0.03 0.28 17 -11.65 0 31 4.85 No 15 0.24 No 0 0 No -26 0.44 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32374561 - NM_080391 PTP4A2 1 0.02 0.19 13 -11.06 0 30 4.78 No 14 0.25 No 0 0 No -25 0.45 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32374584 - NM_080391 PTP4A2 1 0.1 0.81 36 0.78 67.03 28 5.48 No 19 0.24 No 28 0.59 Yes -27 0.7 Yes 43 65.73 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 32375270 - NM_080391 PTP4A2 1 0.06 0.49 27 4.46 84.41 29 4.8 No 11 0.89 Yes 0 0 No -28 0.81 Yes 42 91.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32377443 - NM_080391 PTP4A2 1 0.24 1.86 56 3.69 70.47 33 5.45 No 29 -3.88 No 20 0.76 Yes -29 0.66 Yes 38 53.37 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr1 32378625 - NM_080391 PTP4A2 1 0.03 0.21 14 9.43 83.3 30 5.06 No 58 0.67 No 25 0.66 Yes -25 0.6 No 45 61.27 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 32384654 - NM_080391 PTP4A2 1 0.06 0.24 13 0.19 66.9 76 9.26 Yes 20 1.88 Yes 0 0 No -32 0.95 Yes 38 89.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32396744 - NM_080391 PTP4A2 1 0.31 1.08 47 6.79 84.37 32 4.25 No 76 1.79 Yes 20 0.79 Yes -34 0.62 No 36 75.65 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 32401261 - NM_080391 PTP4A2 1 0.2 0.72 31 3.02 92.24 16 4.47 No 3 0.43 No 25 0.89 Yes -25 0.85 Yes 45 94.52 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 142433266 + NM_007079 PTP4A3 1 1.03 0.71 32 4.33 67.37 31 4.3 No 44 1.1 Yes 0 0 No -23 0.5 No 40 64.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 142433331 + NM_007079 PTP4A3 1 0.22 0.21 7 5.12 82.45 13 5.57 Yes 76 -4.42 No 0 0 No -20 0.79 Yes 50 75.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 142433392 + NM_007079 PTP4A3 1 2.12 1.85 52 9.21 83.67 27 5.29 No 51 -3.35 No 0 0 No -24 0.67 Yes 44 77.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 142436554 + NM_007079 PTP4A3 1 1.05 0.96 36 10.19 81.55 30 6 Yes 76 -2.28 No 0 0 No -29 0.87 Yes 41 85.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131881322 + NM_021131 PTPA 1 0.31 0.42 24 4.47 90.13 27 5.2 No 14 0.1 No 0 0 No -26 0.88 Yes 44 76.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131886392 + NM_021131 PTPA 1 0.09 0.15 9 6.82 84.98 28 5.9 Yes 15 1.51 Yes 0 0 No -27 0.85 Yes 43 90.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131888498 + NM_021131 PTPA 1 0.09 0.17 11 4.21 83.86 32 4.98 No 34 0.8 Yes 0 0 No -27 0.7 Yes 43 73.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131890242 + NM_021131 PTPA 1 10.14 19.33 72 4.18 76.04 23 3.8 No 38 0.09 No 22 0.86 Yes -22 0.84 Yes 48 88.82 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr9 131904959 + NM_021131 PTPA 1 0.2 0.47 25 7.66 73.27 23 6.95 Yes -4 0.49 No 27 0.69 Yes -26 0.53 No 48 68.07 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr9 131905653 + NM_021131 PTPA 1 0.26 0.61 29 11.46 94.39 24 5.14 No 11 0.53 No 24 0.92 Yes -24 0.92 Yes 46 92.73 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr11 47591251 + NM_001143984 PTPMT1 1 140.59 100.25 72 4.37 77.41 50 6.12 Yes 49 0.38 No 22 0.76 Yes -49 0.47 No 21 82.26 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr20 49164988 + NM_002827 PTPN1 1 0.11 0.39 18 2.86 0 39 5.35 No 42 0.86 Yes 0 0 No -31 0.74 Yes 39 86.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 49194055 + NM_002827 PTPN1 1 0.03 0.13 8 5.55 81.61 20 5.23 No 7 0.95 Yes 0 0 No -27 0.92 Yes 43 92.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 49194118 + NM_002827 PTPN1 1 0.03 0.13 7 4.41 86.38 22 5.29 No 70 0.95 Yes 0 0 No -21 0.91 Yes 49 82.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 49196245 + NM_002827 PTPN1 1 0.49 0.82 37 -3.88 0 10 3.87 No 23 1.35 Yes 0 0 No -35 0.9 Yes 35 94.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112888124 + NM_001330437 PTPN11 1 3.62 12.68 72 -3.6 68.85 50 6.93 Yes 37 1.89 Yes 0 0 No -49 0.76 Yes 21 84.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112894584 + NM_001330437 PTPN11 1 0.21 0.65 35 8.51 86.62 21 7.21 Yes 8 1.11 Yes 0 0 No -20 0.77 Yes 50 73.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112895094 + NM_001330437 PTPN11 1 0.44 1.4 47 8.16 74.53 29 7.08 Yes 46 1.69 Yes 28 0.94 Yes -28 0.98 Yes 42 97.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112915638 + NM_001330437 PTPN11 1 0.05 0.17 11 -0.73 0 19 4.36 No 63 1.88 Yes 25 0.81 Yes -18 0.74 Yes 52 63.25 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 112924278 + NM_001330437 PTPN11 1 2140.99 257.47 72 7.64 86.57 43 6.36 Yes 39 1.53 Yes 33 0.37 Yes -38 0.74 Yes 32 85.6 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 112941908 + NM_001330437 PTPN11 1 0.1 0.28 17 9.35 85.33 45 6.89 Yes 32 0.32 No 0 0 No -34 0.44 No 41 47.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 77213909 + NM_001131008 PTPN12 1 0.25 0.24 15 6.61 69.85 16 6.77 Yes 50 -4.53 No 0 0 No -25 0.59 No 45 54.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 77221502 + NM_001131008 PTPN12 1 0.22 0.18 13 -17.58 0 23 6.8 Yes 10 1.24 Yes 0 0 No -26 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 77221503 + NM_001131008 PTPN12 1 0.1 0.1 7 -19.45 0 24 6.86 Yes 11 1.23 Yes 0 0 No -27 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 77234195 + NM_001131008 PTPN12 1 0.25 0.15 10 7.16 77.79 34 5.05 No 21 0.34 No 22 0.57 Yes -33 0.67 Yes 48 60.44 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr7 77236556 + NM_001131008 PTPN12 1 0.8 0.58 28 2.66 0 43 6.52 Yes 67 1.13 Yes 0 0 No -33 0.5 No 37 60.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 77237094 + NM_001131008 PTPN12 1 0.19 0.11 7 2.86 0 45 9.13 Yes 32 1.57 Yes 0 0 No -37 0.91 Yes 33 83.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 77260421 + NM_001131008 PTPN12 1 0.22 0.18 12 9.72 84.39 23 5.8 Yes 68 1.44 Yes 0 0 No -28 0.61 No 42 60.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 77265082 + NM_001131008 PTPN12 1 0.61 0.49 26 -3.07 58.11 21 5.05 No 64 0.25 No 24 0.7 Yes -20 0.69 Yes 59 30.66 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr2 131132238 + NM_014369 PTPN18 1 0.79 0.44 25 13.51 90.97 33 5.4 No 20 1.07 Yes 26 0.92 Yes -26 0.89 Yes 44 87.77 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr18 12788150 - NM_001207013 PTPN2 1 0.22 0.21 11 5.82 80.03 19 6.88 Yes 6 0.74 No 30 0.63 Yes -30 0.48 No 52 60.45 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 12793574 - NM_001207013 PTPN2 1 2.96 2.78 66 9.08 91.2 39 6.34 Yes 30 0.22 No 27 0.55 Yes -27 0.64 No 41 68.95 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr18 12840950 - NM_001207013 PTPN2 1 0.1 0.13 8 0.31 0 17 4.58 No 71 0.89 Yes 0 0 No -40 0.41 No 30 71.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 12840962 - NM_001207013 PTPN2 1 0.66 0.76 35 -0.83 62.59 43 6.88 Yes 59 0.9 Yes 24 0.76 Yes -28 0.65 No 42 84.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr18 12862744 - NM_001207013 PTPN2 1 0.23 0.22 11 9 83.44 35 7.01 Yes -1 1.34 Yes 0 0 No -30 0.92 Yes 40 91.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 12869122 - NM_001207013 PTPN2 1 0.11 0.11 7 8.2 95.21 25 5.57 Yes 36 0.35 No 0 0 No -24 0.65 No 46 55.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 114363078 - NM_001308297 PTPN22 1 1.22 2.42 56 2.25 0 30 4.15 No 49 0.42 No 0 0 No -26 0.44 No 44 51.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 114363078 - NM_001308297 PTPN22 1 0.07 0.15 9 2.25 0 30 4.15 No 49 0.42 No 0 0 No -26 0.44 No 44 51.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 114363082 - NM_001308297 PTPN22 1 0.38 0.75 34 -1.16 82.29 26 3.99 No 45 0.43 No 0 0 No -22 0.41 No 48 46.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 114363699 - NM_001308297 PTPN22 1 0.08 0.14 8 7.94 86.12 56 6 Yes 24 1.84 Yes 0 0 No -27 0.64 No 43 81.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 114363797 - NM_001308297 PTPN22 1 0.08 0.17 9 8.55 88 26 5.54 No 68 0.42 No 0 0 No -25 0.56 No 45 71.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 114366127 - NM_001308297 PTPN22 1 0.26 0.51 25 8.99 83.53 35 6.78 Yes 53 0.6 No 0 0 No -34 0.87 Yes 36 89.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 114374302 - NM_001308297 PTPN22 1 0.1 0.22 14 2.48 68.6 15 5.41 No 37 -4.24 No 0 0 No -21 0.39 No 49 39.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 114377023 - NM_001308297 PTPN22 1 1.2 1.83 60 5.52 82.92 30 6.7 Yes 39 0.84 Yes 0 0 No -29 0.95 Yes 41 97.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 114377059 - NM_001308297 PTPN22 1 1.2 1.88 52 -7.41 78.19 16 5.79 Yes 3 0.82 Yes 0 0 No -33 0.75 Yes 37 73.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 114381266 - NM_001308297 PTPN22 1 0.28 0.44 25 -0.64 63.7 23 4.87 No 10 1.01 Yes 25 0.48 Yes -22 0.37 No 44 60.36 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr1 114381315 - NM_001308297 PTPN22 1 0.47 0.74 38 3.52 79.58 55 5.69 Yes 42 1.8 Yes 0 0 No -33 0.33 No 37 44.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 114382806 - NM_001308297 PTPN22 1 0.08 0.14 10 3.83 86.51 27 5.22 No 64 0.76 No 0 0 No -26 0.78 Yes 44 67.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 114387069 - NM_001308297 PTPN22 1 0.09 0.14 8 2.49 0 40 6.78 Yes 40 0.19 No 0 0 No -39 0.37 No 31 54.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 114397199 - NM_001308297 PTPN22 1 0.76 1.33 50 8.31 85.31 20 5.46 No 26 0.47 No 20 0.55 Yes -29 0.46 No 51 51.03 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 114397651 - NM_001308297 PTPN22 1 2.8 3.68 65 2.28 69.5 26 5.47 No 52 0.6 No 0 0 No -25 0.73 Yes 45 29.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 114402080 - NM_001308297 PTPN22 1 0.16 0.26 14 -4.29 72.2 28 6.19 Yes 38 1.22 Yes 0 0 No -27 0.88 Yes 43 80.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 114407005 - NM_001308297 PTPN22 1 0.13 0.22 13 2.14 0 59 7.66 Yes 46 0.48 No 29 0.02 Yes -58 0.85 Yes 12 62.29 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 47443790 + NM_015466 PTPN23 1 0.31 0.17 10 -0.14 77.69 35 6.4 Yes 69 -2.22 No 0 0 No -34 0.49 No 36 73.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 47443814 + NM_015466 PTPN23 1 0.41 0.19 12 3.67 84 15 4.81 No 2 1.5 Yes 0 0 No -58 0.43 No 12 61.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47445998 + NM_015466 PTPN23 1 0.33 0.18 13 4 71 39 6.56 Yes 71 -5.14 No 0 0 No -38 0.6 No 32 76.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 47447434 + NM_015466 PTPN23 1 9.11 5.28 71 8.41 78.78 25 5.48 No 60 1.1 Yes 24 0.61 Yes -24 0.75 Yes 46 55.82 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr3 47447820 + NM_015466 PTPN23 1 0.22 0.11 7 -3.92 0 9 3.87 No 56 -4.63 No 0 0 No -25 0.53 No 50 55.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47450274 + NM_015466 PTPN23 1 0.72 0.39 23 -1.2 0 17 4.24 No 37 -2.7 No 0 0 No -39 0.54 No 31 41.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47450909 + NM_015466 PTPN23 1 0.6 0.32 20 0.85 71.1 37 6.55 Yes 24 1.52 Yes 0 0 No -36 0.91 Yes 34 89.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 120560284 + NM_002830 PTPN4 1 1.55 0.31 14 11.11 96.26 27 6.56 Yes 64 0.08 No 0 0 No -26 0.86 Yes 44 87.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 120634877 + NM_002830 PTPN4 1 1.26 0.32 14 -13.24 0 14 3.16 No 59 -5.56 No 23 0.38 Yes -18 0.35 No 60 13.65 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 120634900 + NM_002830 PTPN4 1 0.48 0.11 7 -0.64 86 26 3.7 No 76 -4.19 No 0 0 No -25 0.85 Yes 45 80.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 120635018 + NM_002830 PTPN4 1 7.55 1.68 55 0.38 66.58 20 4.69 No 44 0.51 No 19 0.82 Yes -19 0.9 Yes 51 77.23 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 120638030 + NM_002830 PTPN4 1 0.56 0.15 10 3.19 0 37 7.26 Yes 56 1.13 Yes 0 0 No -36 0.68 Yes 33 71.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 120674042 + NM_002830 PTPN4 1 0.77 0.13 9 3.23 74.51 42 7.65 Yes 23 0 No 0 0 No -31 0.37 No 39 41.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 120674187 + NM_002830 PTPN4 1 1.05 0.18 12 5.37 76.24 9 5.92 Yes -4 0.45 No 0 0 No -23 0.73 Yes 47 66.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 120674198 + NM_002830 PTPN4 1 16.8 3.1 66 -3.49 0 20 4.47 No 67 -2.77 No 0 0 No -19 0.9 Yes 51 89.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 120678338 + NM_002830 PTPN4 1 2.38 0.49 27 6.18 82.62 22 5.67 Yes 29 1.48 Yes 0 0 No -21 0.59 No 41 63.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 120685838 + NM_002830 PTPN4 1 1.14 0.28 16 8.77 76.88 44 6.64 Yes 2 0.78 Yes 0 0 No -27 0.38 No 48 45.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 120692397 + NM_002830 PTPN4 1 0.39 0.11 7 4.71 82.78 29 5.26 No 49 0.6 No 0 0 No -24 0.53 No 46 73.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 120694138 + NM_002830 PTPN4 1 0.52 0.17 9 4.15 66.75 27 7.87 Yes 54 1.17 Yes 0 0 No -26 0.85 Yes 44 84.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 120695357 + NM_002830 PTPN4 1 0.44 0.15 9 3.86 70.7 47 8.18 Yes 34 0.87 Yes 0 0 No -47 0.26 No 39 59.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 120712416 + NM_002830 PTPN4 1 0.64 0.13 7 8.99 82.58 20 5.83 Yes 55 0.15 No 0 0 No -29 0.85 Yes 41 87.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 7061074 + NM_080549 PTPN6 1 0.84 5.11 71 7.58 80.47 86 9.95 Yes 73 2.95 Yes 28 0.55 Yes -24 0.48 No 46 66.55 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 7061179 + NM_080549 PTPN6 1 0.21 1.32 47 5.24 76.28 19 5.47 No 6 1.38 Yes 26 0.74 Yes -18 0.43 No 52 43.26 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr12 7061210 + NM_080549 PTPN6 1 0.03 0.15 10 -11.55 70.84 27 5.74 Yes 37 1.35 Yes 0 0 No -26 0.93 Yes 44 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 7061275 + NM_080549 PTPN6 1 0.25 1.61 53 1.02 0 21 4.58 No 65 -3.87 No 20 0.95 Yes -20 0.86 Yes 50 62.44 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr12 7062504 + NM_080549 PTPN6 1 0.09 0.63 29 8.85 85.2 28 4.62 No 15 1.44 Yes 27 0.94 Yes -27 0.91 Yes 43 88.18 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 7064824 + NM_080549 PTPN6 1 0.02 0.1 7 -7.33 66.22 30 6.36 Yes 64 2.1 Yes 0 0 No -23 0.63 No 47 67.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 7064831 + NM_080549 PTPN6 1 0.09 0.5 24 -6.84 0 12 4 No 71 2.08 Yes 0 0 No -36 0.62 No 40 75.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 7066930 + NM_080549 PTPN6 1 0.03 0.21 12 8.61 90.58 33 6.7 Yes 56 0.36 No 0 0 No -28 0.54 No 43 40.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 7069276 + NM_080549 PTPN6 1 0.02 0.11 8 3.13 74.59 15 5.9 Yes 30 1.13 Yes 0 0 No -20 0.57 No 56 42.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 7069512 + NM_080549 PTPN6 1 0.16 1.24 46 0.96 0 11 3.87 No NA NA NA 0 0 No -28 0.65 No 37 51.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 7070245 + NM_080549 PTPN6 1 0.09 0.79 38 11.51 92.87 24 5.48 No 34 1.11 Yes 26 0.93 Yes -27 0.82 Yes 49 42.17 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 7070294 + NM_080549 PTPN6 1 0.01 0.13 8 -2.13 0 15 3.87 No 20 1.87 Yes 0 0 No -32 0.94 Yes 38 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 202118421 - NM_001199797 PTPN7 1 0.07 0.11 8 5.47 90.72 22 5.1 No 71 -3.58 No 0 0 No -21 0.92 Yes 49 93.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 202118501 - NM_001199797 PTPN7 1 1.5 2.42 62 8.32 83.58 20 6.84 Yes 60 0.1 No 0 0 No -23 0.34 No 51 45.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 202119548 - NM_001199797 PTPN7 1 0.56 0.89 41 4.38 0 37 9.03 Yes 24 1.79 Yes 0 0 No -36 0.56 No 34 77.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 202121897 - NM_001199797 PTPN7 1 0.11 0.21 12 7.2 88.61 24 5 No 11 1.06 Yes 0 0 No -23 0.75 Yes 47 84.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 202122979 - NM_001199797 PTPN7 1 0.73 1.65 53 6.52 83.96 20 5.57 Yes 7 2.18 Yes 23 0.96 Yes -24 0.61 No 46 75.12 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 202126949 - NM_001199797 PTPN7 1 3.67 5.29 72 3.97 67.97 26 6.32 Yes 13 2.05 Yes 22 0.95 Yes -25 0.94 Yes 45 94.18 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 202127067 - NM_001199797 PTPN7 1 0.68 0.96 42 9.05 76.45 32 6.16 Yes 58 -2.54 No 0 0 No -25 0.58 No 39 59.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 202127067 - NM_001199797 PTPN7 1 0.36 0.5 27 9.05 76.45 32 6.16 Yes 58 -2.54 No 0 0 No -25 0.58 No 39 59.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 202127377 - NM_001199797 PTPN7 1 5.61 6.61 71 3.29 62.27 32 7.87 Yes 19 1.32 Yes 31 0.85 Yes -31 0.8 Yes 39 79.7 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr1 202127449 - NM_001199797 PTPN7 1 0.12 0.15 11 -2.71 0 21 6.08 Yes -3 0.42 No 20 0.42 Yes -20 0.41 No 43 29.2 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 202127453 - NM_001199797 PTPN7 1 0.18 0.19 13 5.25 70.77 17 5.74 Yes 27 -3.14 No 20 0.42 Yes -23 0.56 No 47 36.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr15 75772252 - NM_002833 PTPN9 1 0.5 0.5 24 2.43 0 26 6 Yes 13 1.21 Yes 0 0 No -29 0.67 Yes 41 69.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 75788613 - NM_002833 PTPN9 1 0.11 0.13 8 10.97 87.72 30 8.35 Yes 17 1.17 Yes 0 0 No -29 0.89 Yes 41 95.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 75794421 - NM_002833 PTPN9 1 0.16 0.19 12 7.97 75.06 103 10.62 Yes 15 -0.28 No 0 0 No -27 0.49 No 43 54.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 75805780 - NM_002833 PTPN9 1 0.86 0.61 32 8.89 88.91 24 6.65 Yes 11 1.43 Yes 23 0.91 Yes -23 0.76 Yes 47 65.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr15 75806081 - NM_002833 PTPN9 1 1.06 0.81 34 9.08 90.86 27 5.2 No 41 1.69 Yes 0 0 No -26 0.5 No 17 81.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 75806105 - NM_002833 PTPN9 1 0.47 0.31 14 3.06 83.28 30 6.48 Yes 17 1.69 Yes 0 0 No -29 0.93 Yes 41 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 75862688 - NM_002833 PTPN9 1 0.68 0.19 11 9.08 84.54 22 5.22 No 65 -1.03 No 0 0 No -22 0.34 No 51 38.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 2931008 + NM_002836 PTPRA 1 0.61 0.47 24 2.44 73.04 70 7.76 Yes 57 0.78 Yes 0 0 No -22 0.59 No 48 64.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 2936254 + NM_002836 PTPRA 1 1.98 1.6 57 6.71 77.87 17 3.39 No 43 0.02 No 26 0.45 Yes -23 0.56 No 44 50.91 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr20 2945680 + NM_002836 PTPRA 1 0.08 0.17 12 4.38 84.04 20 7.25 Yes 67 2 Yes 0 0 No -19 0.55 No 42 42.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 2968245 + NM_002836 PTPRA 1 0.12 0.17 10 9.88 92.36 30 7.35 Yes 10 0.51 No 0 0 No -30 0.7 Yes 40 65.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 2979976 + NM_002836 PTPRA 1 2.68 4.36 70 6.05 70.04 29 5.72 Yes 59 0.44 No 0 0 No -28 0.72 Yes 42 78.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2988691 + NM_002836 PTPRA 1 1.04 1.22 42 2.91 79.49 17 4.56 No 5 -1.32 No 0 0 No -21 0.53 No 53 36.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 2988845 + NM_002836 PTPRA 1 0.14 0.14 10 -2.24 66.73 23 4.9 No -2 0.19 No 0 0 No -22 0.62 No 48 44.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 3003339 + NM_002836 PTPRA 1 0.33 0.31 16 0.62 0 28 7.21 Yes 15 1.46 Yes 0 0 No -28 0.76 Yes 42 71.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3007335 + NM_002836 PTPRA 1 0.11 0.15 7 0.4 64.27 31 6.4 Yes 18 1.61 Yes 0 0 No -31 0.7 Yes 39 68.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 3008185 + NM_002836 PTPRA 1 0.27 0.42 19 10.69 88.41 31 6.63 Yes 54 2.48 Yes 0 0 No -30 0.79 Yes 40 91.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3015546 + NM_002836 PTPRA 1 2.19 2.69 63 8.57 85.05 49 7.23 Yes 28 0.64 No 0 0 No -29 0.77 Yes 41 85.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 3016438 + NM_002836 PTPRA 1 0.1 0.13 8 -7.34 74.24 22 6.93 Yes 9 1.78 Yes 0 0 No -21 0.56 No 34 58.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 198608358 + NM_002838 PTPRC 1 2.25 3.18 64 3.21 82.18 24 5.91 Yes 46 0.54 No 0 0 No -23 0.57 No 47 67.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 198623075 + NM_002838 PTPRC 1 1.1 2.43 59 9.12 87.48 18 5.73 Yes 5 1.31 Yes 0 0 No -26 0.77 Yes 44 82.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 198641023 + NM_002838 PTPRC 1 0.13 0.31 16 7.42 82.46 23 6.58 Yes 10 1.33 Yes 0 0 No -31 0.68 Yes 48 76.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 198663146 + NM_002838 PTPRC 1 2.55 3.03 60 3.55 73.09 23 4.97 No 53 -5.31 No 22 0.87 Yes -22 0.94 Yes 48 72.44 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 198671478 + NM_002838 PTPRC 1 0.09 0.17 12 6.73 80.02 45 6.35 Yes 32 0.82 Yes 28 0.88 Yes -44 0.42 No 26 69.8 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 198685918 + NM_002838 PTPRC 1 0.13 0.31 17 -0.62 62.38 46 7.41 Yes 72 -3.25 No 0 0 No -29 0.4 No 25 71.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 198696016 + NM_002838 PTPRC 1 0.06 0.14 7 10.18 94.37 51 9.12 Yes 38 2.38 Yes 0 0 No -50 0.75 Yes 20 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 198698762 + NM_002838 PTPRC 1 0.1 0.19 10 2.28 84.62 30 5.14 No 41 0.51 No 0 0 No -25 0.44 No 45 44.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67203453 - NM_005608 PTPRCAP 1 0.04 0.1 7 3.31 79.89 27 6.4 Yes 74 -4.73 No 0 0 No -26 0.69 Yes 44 55.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67203504 - NM_005608 PTPRCAP 1 0.04 0.13 9 -2.55 0 15 3.87 No 2 0.46 No 0 0 No -14 0.55 No 56 22.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67203524 - NM_005608 PTPRCAP 1 0.05 0.18 9 1.52 71.68 16 4.69 No 3 -0.23 No 0 0 No -15 0.55 No 55 70.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 67203614 - NM_005608 PTPRCAP 1 1.28 4.21 68 5.25 70.49 34 5.92 Yes 21 0.92 Yes 0 0 No -29 0.74 Yes 41 73.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67203803 - NM_005608 PTPRCAP 1 0.42 1.32 53 7.91 72.82 24 5.29 No 29 1.36 Yes 0 0 No -23 0.55 No 29 55.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 129850312 + NM_001323356 PTPRE 1 0.64 0.15 8 8.31 86.44 14 5.52 No 70 0.83 Yes 0 0 No -25 0.88 Yes 45 90.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 129866389 + NM_001323356 PTPRE 1 2.54 0.75 36 2.61 73.9 35 7.16 Yes 22 1.23 Yes 0 0 No -34 0.8 Yes 36 83.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 129866903 + NM_001323356 PTPRE 1 0.51 0.11 7 6.9 91.77 26 5.1 No 62 1.84 Yes 0 0 No -25 0.56 No 45 38.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 57777551 - NM_016077 PTRH2 1 11.86 11.43 72 6.57 78.93 23 4.12 No 10 0.85 Yes 22 0.64 Yes -22 0.3 No 48 53.67 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr11 112100139 + NM_000317 PTS 1 3.21 0.74 33 3.73 84.41 40 6.44 Yes 27 1.38 Yes 0 0 No -39 0.86 Yes 31 87.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 112100164 + NM_000317 PTS 1 1.73 0.43 22 6.53 93.38 28 5.29 No 52 1.38 Yes 0 0 No -27 0.56 No 43 50.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 159849670 + NM_001282382 PTTG1 1 0.03 0.15 9 -1.35 0 12 3.62 No 70 -5.68 No 0 0 No -22 0.42 No 46 50.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 159849702 + NM_001282382 PTTG1 1 0.05 0.28 15 -2.56 68.95 9 6.4 Yes 46 -2.5 No 21 0.94 Yes -36 0.55 No 34 35.78 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr5 159854358 + NM_001282382 PTTG1 1 0.02 0.11 8 8.25 85.47 29 6.55 Yes 2 0.68 No 0 0 No -28 0.82 Yes 42 87.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 46275164 - NM_004339 PTTG1IP 1 0.05 0.14 10 -9.09 0 11 4.12 No 15 0.89 Yes 0 0 No -30 0.96 Yes 40 95.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 6975865 - NM_001135565 PUDP 1 0.4 0.46 27 5.66 61.81 46 7.69 Yes 33 2.04 Yes 33 0.31 Yes -45 0.64 No 25 94.69 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chrX 7003513 - NM_001135565 PUDP 1 0.54 0.93 43 7.64 84.16 41 6.4 Yes 28 1.21 Yes 40 0.19 Yes -30 0.64 No 40 60.15 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr8 144902887 - NM_001271097 PUF60 1 164.04 134.58 72 12.18 89.51 25 6.07 Yes 12 1.45 Yes 24 0.91 Yes -24 0.69 Yes 46 81.78 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144906567 - NM_001271097 PUF60 1 29.7 5.5 70 5.82 81.81 28 8.12 Yes 71 0.75 No 22 0.87 Yes -25 0.79 Yes 45 76.02 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144906570 - NM_001271097 PUF60 1 148.15 28.18 72 9.23 85.74 25 7.94 Yes 68 0.75 No 22 0.87 Yes -22 0.78 Yes 48 76.47 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 144909707 - NM_001271097 PUF60 1 0.54 0.14 8 7.67 81.1 35 5.96 Yes 22 0.68 No 31 0.41 Yes -29 0.68 Yes 41 71.07 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 31414119 - NM_001020658 PUM1 1 0.11 0.13 9 -4.15 0 38 7.48 Yes 5 1.03 Yes 0 0 No -37 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 31414515 - NM_001020658 PUM1 1 0.16 0.19 10 8.36 85.04 24 4.38 No 3 0.89 Yes 0 0 No -23 0.74 Yes 47 73.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 31426666 - NM_001020658 PUM1 1 0.15 0.15 10 6.06 85.18 20 6.41 Yes 7 0.14 No 19 0.6 Yes -19 0.77 Yes 51 75.15 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 31427908 - NM_001020658 PUM1 1 1.43 1.47 48 -2.04 0 85 10.03 Yes 65 0.48 No 0 0 No -67 0.16 No 24 30.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 31439045 - NM_001020658 PUM1 1 29.93 20.53 72 8 86.07 26 7.21 Yes 73 -4.09 No 26 0.56 Yes -23 0.55 No 47 35.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 31446932 - NM_001020658 PUM1 1 0.26 0.19 9 4.84 84.41 23 5.83 Yes 10 1.61 Yes 0 0 No -22 0.69 Yes 48 69.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 31453014 - NM_001020658 PUM1 1 51.77 37.33 72 1.41 0 17 4.58 No 4 1.27 Yes 24 0.87 Yes -16 0.53 No 54 78.67 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr1 31453026 - NM_001020658 PUM1 1 6 4.39 69 7.84 92.79 21 5.07 No 70 0.26 No 24 0.87 Yes -24 0.89 Yes 46 74.31 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr1 31455488 - NM_001020658 PUM1 1 0.33 0.39 23 3.05 71.28 31 6.41 Yes 18 0.92 Yes 0 0 No -28 0.46 No 40 44.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 31461228 - NM_001020658 PUM1 1 1.17 1.43 54 1.29 64.5 56 8.09 Yes 43 0.88 Yes 0 0 No -55 0.67 Yes 15 84.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 31461636 - NM_001020658 PUM1 1 0.1 0.11 8 7.39 90.69 30 5.48 No 22 0.22 No 0 0 No -25 0.48 No 45 34.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 31477034 - NM_001020658 PUM1 1 0.06 0.11 7 9.38 83.62 37 4.98 No 24 0.98 Yes 0 0 No -32 0.46 No 38 68.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 31479947 - NM_001020658 PUM1 1 7.79 10 72 4.02 78.15 31 5.85 Yes 51 1.25 Yes 0 0 No -31 0.5 No 45 59.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 31517244 - NM_001020658 PUM1 1 0.06 0.1 7 11.44 87.72 27 3.84 No 62 0.81 Yes 0 0 No -26 0.5 No 44 60.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 31528228 - NM_001020658 PUM1 1 1.06 1.67 51 10.14 90.28 33 4.84 No 3 0.72 No 32 0.37 Yes -30 0.43 No 46 52.85 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr1 31535464 - NM_001020658 PUM1 1 0.09 0.14 9 4.74 84.41 31 5.48 No 30 1.51 Yes 0 0 No -30 0.9 Yes 40 96.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 20454719 - NM_001282752 PUM2 1 0.07 0.21 12 1.27 80.82 24 3.87 No 36 0.43 No 0 0 No -29 0.53 No 50 62.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20458069 - NM_001282752 PUM2 1 0.18 0.54 32 6.23 78.73 16 6.91 Yes 73 0.86 Yes 0 0 No -31 0.55 No 45 54.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 20463056 - NM_001282752 PUM2 1 0.11 0.17 9 5.31 82.17 23 5.45 No 10 0.87 Yes 0 0 No -22 0.52 No 48 54.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 20463219 - NM_001282752 PUM2 1 0.2 0.32 17 -10.68 79.37 25 5.1 No 12 1.72 Yes 0 0 No -24 0.84 Yes 46 94.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 20463219 - NM_001282752 PUM2 1 0.13 0.19 13 -10.68 79.37 25 5.1 No 12 1.72 Yes 0 0 No -24 0.84 Yes 46 94.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 20478063 - NM_001282752 PUM2 1 0.68 1 38 10.29 81.37 46 8.38 Yes 33 0.81 Yes 0 0 No -46 0.67 Yes 25 78.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 20478219 - NM_001282752 PUM2 1 0.22 0.32 18 7.89 84.53 123 9.29 Yes 47 -3.28 No 0 0 No -24 0.44 No 46 55.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20478442 - NM_001282752 PUM2 1 0.64 0.57 29 3.73 72.77 32 5.73 Yes 19 -1.32 No 0 0 No -29 0.66 No 39 85.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 20482990 - NM_001282752 PUM2 1 0.97 1.44 49 1.29 85.02 19 5.18 No 6 0.6 No 0 0 No -30 0.47 No 39 66.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20497422 - NM_001282752 PUM2 1 3.02 5.21 71 4.46 89.64 27 5.15 No 63 0.22 No 0 0 No -26 0.38 No 14 32.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20497425 - NM_001282752 PUM2 1 3.39 5.86 72 1.7 78.85 24 4.86 No 60 0.22 No 0 0 No -53 0.47 No 17 38.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20503136 - NM_001282752 PUM2 1 0.14 0.25 15 5.24 91.83 24 5.79 Yes 31 0.82 Yes 0 0 No -23 0.59 No 47 48.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 20511417 - NM_001282752 PUM2 1 0.11 0.25 14 -3.63 0 11 4.12 No 62 0.44 No 0 0 No -29 0.49 No 43 35.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20511440 - NM_001282752 PUM2 1 0.34 0.82 35 -2.63 0 20 4.35 No 39 0.44 No 21 0.76 Yes -46 0.88 Yes 24 93.48 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr2 20531699 - NM_001282752 PUM2 1 2.12 2.63 68 7.9 79.52 24 6.04 Yes 11 1.1 Yes 23 0.9 Yes -23 0.96 Yes 47 94.16 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 20532825 - NM_001282752 PUM2 1 3.63 4.58 70 8.98 90.44 30 5.5 No 71 0.79 Yes 29 0.28 Yes -27 0.57 No 51 52.37 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 20533261 - NM_001282752 PUM2 1 1.43 1.75 59 4.49 0 58 7.72 Yes 45 0.5 No 0 0 No -57 0.72 Yes 13 71.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 20545855 - NM_001282752 PUM2 1 0.18 0.24 11 7.65 86.45 23 5.6 Yes 10 0.82 Yes 0 0 No -22 0.62 No 48 56.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 2811593 - NM_014878 PUM3 1 0.1 0.19 13 -4.43 0 54 7.47 Yes 4 0.9 Yes 31 0.89 Yes -22 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 2821025 - NM_014878 PUM3 1 0.06 0.1 7 7.82 75.68 33 6.56 Yes -1 0.67 No 0 0 No -32 0.89 Yes 38 94.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 2824830 - NM_014878 PUM3 1 0.06 0.11 7 4.38 84.45 24 4.9 No 58 1.05 Yes 18 0.92 Yes -24 0.42 No 51 43.04 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 2824886 - NM_014878 PUM3 1 0.12 0.21 14 5.47 76.27 62 9.93 Yes 2 1.13 Yes 0 0 No -49 0.43 No 28 69.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 2827077 - NM_014878 PUM3 1 0.15 0.24 17 4.99 71.38 44 6.99 Yes 42 0.24 No 0 0 No -46 0.53 No 24 85.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 2829946 - NM_014878 PUM3 1 0.66 1.71 53 -0.96 66.81 56 7.02 Yes 43 1.32 Yes 25 0.75 Yes -30 0.63 No 33 69.39 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr9 2833428 - NM_014878 PUM3 1 0.05 0.13 9 -3.65 0 50 9.08 Yes 37 1.08 Yes 0 0 No -36 0.73 Yes 34 69.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 2833432 - NM_014878 PUM3 1 0.05 0.11 8 -13.76 0 46 8.86 Yes 33 1.09 Yes 0 0 No -32 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 2835413 - NM_014878 PUM3 1 0.82 2.14 58 -0.31 87.93 20 4.28 No 7 1.12 Yes 0 0 No -19 0.72 Yes 51 73.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132417266 + NM_001002020 PUS1 1 13.85 11.22 71 12.82 84.82 32 7.27 Yes 19 0.94 Yes 27 0.89 Yes -27 0.68 Yes 43 54.28 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 132419188 + NM_001002020 PUS1 1 0.46 0.42 20 4.43 68.26 28 6.11 Yes 15 1.2 Yes 0 0 No -33 0.84 Yes 37 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61181290 - NM_001322124 PUS10 1 0.6 0.22 13 -3.29 0 51 8.36 Yes 64 2.12 Yes 0 0 No -50 0.49 No 20 82.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 61232369 - NM_001322124 PUS10 1 0.57 0.15 8 5.98 93.18 28 5.29 No 68 -1.73 No 0 0 No -27 0.8 Yes 43 67.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 61238024 - NM_001322124 PUS10 1 48.26 11.36 72 10.56 89.68 18 5.21 No 5 0.6 No 25 0.64 Yes -25 0.66 No 45 67.74 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr7 105106598 - NM_001318164 PUS7 1 0.13 0.11 8 4.26 0 29 7.16 Yes 70 0.65 No 0 0 No -29 0.7 Yes 41 70.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105127501 - NM_001318164 PUS7 1 0.33 0.22 11 7.88 93.83 29 6.71 Yes 60 -3.39 No 0 0 No -28 0.78 Yes 42 79.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 44125032 - NM_001098615 PUS7L 1 1.63 1.25 52 3.68 70.59 50 7.34 Yes 11 0.85 Yes 0 0 No -23 0.7 Yes 29 63.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 44128026 - NM_001098615 PUS7L 1 0.17 0.15 8 10.71 87.76 19 5.83 Yes 39 0.96 Yes 0 0 No -27 0.62 No 43 84.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 44133548 - NM_001098615 PUS7L 1 0.56 0.63 30 7.83 92.98 28 5.29 No 76 1.69 Yes 0 0 No -27 0.76 Yes 43 72.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 44133580 - NM_001098615 PUS7L 1 0.47 0.57 30 7.46 74.7 57 8.61 Yes 44 1.72 Yes 0 0 No -39 0.36 No 14 48.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 44135344 - NM_001098615 PUS7L 1 0.11 0.13 7 5.97 88.43 33 7.52 Yes 57 0.12 No 0 0 No -32 0.76 Yes 38 91.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 44136509 - NM_001098615 PUS7L 1 0.14 0.17 12 10.14 90.76 43 6.67 Yes 30 2.3 Yes 0 0 No -35 0.62 No 35 82.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 1245085 + NM_001346116 PUSL1 1 4.73 1.69 55 5.96 83.16 29 5.83 Yes 35 1.75 Yes 28 0.81 Yes -28 0.67 Yes 42 39.16 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr1 1245987 + NM_001346116 PUSL1 1 0.38 0.14 9 3.94 76.81 25 5.57 Yes 43 0.74 No 20 0.68 Yes -24 0.78 Yes 46 70.09 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 128914701 + NR_003367 PVT1 1 0.84 0.82 40 10.75 85.23 44 7 Yes 31 1.43 Yes 0 0 No -36 0.63 No 34 80.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 128924964 + NR_003367 PVT1 1 0.15 0.15 8 10.64 88.27 35 8.54 Yes 44 2.19 Yes 0 0 No -32 0.61 No 38 84.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 128944298 + NR_003367 PVT1 1 3.31 3.31 66 7.93 86.5 13 5.26 No 76 0.79 Yes 0 0 No -27 0.93 Yes 43 95.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 128944710 + NR_003367 PVT1 1 24.99 26.04 72 11.14 92.14 31 5.31 No 18 0.26 No 30 0.82 Yes -30 0.76 Yes 40 85.8 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 129001466 + NR_003367 PVT1 1 0.65 0.11 7 5.04 81.83 22 6.59 Yes 74 0.63 No 23 0.64 Yes -27 0.54 No 43 58.51 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr8 128998311 + NR_003367 PVT1 1 2.46 0.4 20 9.93 85.88 48 5.21 No 18 -0.71 No 0 0 No -28 0.61 No 40 50.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 128998350 + NR_003367 PVT1 1 0.68 0.11 8 8.9 88.17 29 5.39 No 16 0.25 No 0 0 No -28 0.78 Yes 42 88.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 129094998 + NR_003367 PVT1 1 1.28 0.18 12 13.76 81.64 29 6.05 Yes 13 0.83 Yes 28 0.84 Yes -28 0.92 Yes 42 90.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 129108766 + NR_003367 PVT1 1 1.56 0.28 16 5.77 82.63 43 4.98 No 24 0.51 No 33 0.64 Yes -36 0.83 Yes 34 89.75 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr8 129085648 + NR_003367 PVT1 1 1.34 0.24 14 9.96 91.22 65 10.12 Yes 52 3.07 Yes 0 0 No -28 0.91 Yes 42 83.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 129086315 + NR_003367 PVT1 1 2.85 0.49 27 7.41 89.72 21 5.82 Yes 8 0.72 No 0 0 No -21 0.68 Yes 49 76.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 129086318 + NR_003367 PVT1 1 0.62 0.1 7 1.03 78.89 24 6.06 Yes 11 0.71 No 0 0 No -24 0.71 Yes 46 80.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 129094998 + NR_003367 PVT1 1 4.55 0.72 29 13.76 81.64 29 6.05 Yes 13 0.83 Yes 28 0.84 Yes -28 0.92 Yes 42 90.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 129107937 + NR_003367 PVT1 1 0.61 0.11 7 8.69 85.4 28 6.32 Yes 15 0.45 No 0 0 No -27 0.74 Yes 43 65.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 129108766 + NR_003367 PVT1 1 6.66 1.11 50 5.77 82.63 43 4.98 No 24 0.51 No 33 0.64 Yes -36 0.83 Yes 34 89.75 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 108086748 + NM_001317962 PWP1 1 0.13 0.22 13 6.44 79.21 20 6.44 Yes 7 0.79 Yes 19 0.86 Yes -19 0.77 Yes 51 77.64 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr21 45534509 + NM_005049 PWP2 1 0.29 0.21 15 -0.55 0 36 7.39 Yes 60 -1.97 No 0 0 No -29 0.53 No 41 66.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45538628 + NM_005049 PWP2 1 0.35 0.36 16 9.13 88.48 9 5.29 No 36 -0.54 No 19 0.96 Yes -30 0.54 No 49 47.31 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr21 45544489 + NM_005049 PWP2 1 0.21 0.26 16 8.22 82.93 23 6.16 Yes 10 1.25 Yes 0 0 No -22 0.95 Yes 48 90.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45547455 + NM_005049 PWP2 1 0.4 0.35 23 7.7 72.61 44 6.83 Yes 51 1.76 Yes 20 0.35 Yes -43 0.66 No 32 57.17 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr21 45550484 + NM_005049 PWP2 1 0.55 0.6 28 -1.67 0 11 3.52 No 17 1.62 Yes 0 0 No -29 0.79 Yes 41 84.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 159516618 - NM_052927 PWWP2A 1 21.63 1.86 62 11.35 87.72 29 5.74 Yes 59 0.25 No 28 0.57 Yes -31 0.73 Yes 39 76.13 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr5 159535622 - NM_052927 PWWP2A 1 21.74 5.51 72 9.67 95.02 18 5.43 No 5 0.78 Yes 26 0.33 Yes -26 0.44 No 45 58.88 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr5 159542978 - NM_052927 PWWP2A 1 1.24 0.36 19 11.47 93.23 31 5.52 No 18 0.83 Yes 0 0 No -30 0.92 Yes 40 88.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 159544933 - NM_052927 PWWP2A 1 26.42 6.71 72 12.58 91.9 26 6.07 Yes 13 1.7 Yes 0 0 No -25 0.88 Yes 45 92.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 58363635 + NM_001289098 PXK 1 0.59 0.22 11 5.05 80.94 30 5.99 Yes 74 -5.53 No 0 0 No -24 0.95 Yes 46 95.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 58397351 + NM_001289098 PXK 1 0.77 0.19 14 7.03 74.93 25 5.39 No 12 1.51 Yes 0 0 No -24 0.88 Yes 46 94.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 58398630 + NM_001289098 PXK 1 38.94 9.51 72 8.43 96.75 29 5.89 Yes 16 0.06 No 28 0.48 Yes -31 0.64 No 39 79.61 Yes BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr12 133267658 + NM_018663 PXMP2 1 0.28 0.32 19 3.97 84.41 23 6.86 Yes 47 1.21 Yes 0 0 No -22 0.4 No 36 51.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133278079 + NM_018663 PXMP2 1 0.19 0.15 11 8.2 81.78 83 9.43 Yes 70 1.87 Yes 0 0 No -36 0.41 No 45 26.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133279014 + NM_018663 PXMP2 1 0.47 0.5 30 6.44 82.47 19 6.54 Yes 73 -3.39 No 27 0.55 Yes -29 0.51 No 48 49.72 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 133279018 + NM_018663 PXMP2 1 0.07 0.1 7 0.18 0 23 6.83 Yes 68 -2.93 No 0 0 No -22 0.47 No 48 52.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 120650438 - NM_002859 PXN 1 1.26 0.49 24 7.05 78.65 45 6.55 Yes 74 -4.64 No 0 0 No -26 0.5 No 41 36.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 120653221 - NM_002859 PXN 1 20.21 3.18 63 9.18 79.85 19 5.91 Yes 6 2.1 Yes 18 0.8 Yes -18 0.63 No 52 90.77 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 120653459 - NM_002859 PXN 1 1.68 0.26 15 0.57 0 9 3.85 No 19 1.45 Yes 0 0 No -31 0.9 Yes 39 90.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120653465 - NM_002859 PXN 1 27.21 4.67 68 5.87 73.29 26 4.96 No 13 1.48 Yes 25 0.96 Yes -25 0.91 Yes 45 91.14 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 120654385 - NM_002859 PXN 1 4.24 0.79 30 12.61 95.03 29 6.99 Yes 16 1.58 Yes 0 0 No -28 0.95 Yes 42 97.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120662531 - NM_002859 PXN 1 5.2 0.39 16 10.44 83.24 44 8.12 Yes 31 1.28 Yes 23 0.52 Yes -43 0.41 No 27 82.09 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr12 120664921 - NM_002859 PXN 1 25.35 2.04 53 11.67 88.31 35 4.54 No 57 1.57 Yes 28 0.65 Yes -23 0.69 Yes 47 68.76 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr12 120647648 + NR_038924 PXN-AS1 1 0.81 0.18 10 1.04 0 10 4 No 42 0.21 No 0 0 No -42 0.53 No 28 40.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31213618 - NM_013258 PYCARD 1 0.3 0.21 13 -1.07 68.56 24 5 No 51 1.36 Yes 23 0.9 Yes -23 0.74 Yes 47 32 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 31213634 - NM_013258 PYCARD 1 1.23 0.68 36 1.16 57.69 48 7.81 Yes 35 1.39 Yes 23 0.9 Yes -47 0.91 Yes 23 92.62 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79892622 - NM_001282279 PYCR1 1 1483.77 175.5 72 11.38 90.69 21 5.2 No 8 0.34 No 20 0.92 Yes -20 0.94 Yes 50 95.18 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr17 79893021 - NM_001282279 PYCR1 1 2.38 4.18 69 0.44 76.32 37 5.88 Yes 46 -1.82 No 21 0.57 Yes -24 0.6 No 46 62.22 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr17 79893284 - NM_001282279 PYCR1 1 0.07 0.17 9 3.18 62.75 38 6.18 Yes 45 1.08 Yes 0 0 No -30 0.44 No 40 51.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 79893390 - NM_001282279 PYCR1 1 0.45 0.85 37 -2.69 65.95 26 5.65 Yes 13 1.18 Yes 0 0 No -25 0.84 Yes 45 82.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 226110081 - NM_001271681 PYCR2 1 0.62 1.68 54 -2.9 74.52 26 5 No 62 0.34 No 0 0 No -25 0.78 Yes 45 83.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226110161 - NM_001271681 PYCR2 1 0.08 0.21 14 1.23 77.62 14 3.79 No 64 -5.71 No 0 0 No -23 0.86 Yes 47 72.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226111089 - NM_001271681 PYCR2 1 0.12 0.31 15 9.22 88.21 32 6.21 Yes 9 0.75 No 0 0 No -21 0.68 Yes 49 71.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226111240 - NM_001271681 PYCR2 1 0.05 0.13 8 7.54 84.03 28 6.55 Yes 35 1.98 Yes 0 0 No -27 0.84 Yes 43 91.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144688307 - NM_001329866 PYCRL 1 0.53 0.18 12 -1.87 74.51 23 5.2 No 43 1.25 Yes 0 0 No -20 0.82 Yes 50 78.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144688383 - NM_001329866 PYCRL 1 0.44 0.15 8 6.58 83.67 53 6.54 Yes 40 0.52 No 0 0 No -25 0.63 No 39 49.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 25241063 + NM_002862 PYGB 1 0.3 0.21 14 8.92 92.52 15 5.76 Yes 2 1.13 Yes 0 0 No -36 0.45 No 40 57.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 25256835 + NM_002862 PYGB 1 0.76 0.75 33 5.9 85.23 13 4.8 No NA NA NA 0 0 No -19 0.83 Yes 51 78.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 25268663 + NM_002862 PYGB 1 0.79 0.65 32 7.18 89.64 24 5.19 No 47 0.48 No 0 0 No -23 0.69 Yes 47 62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 25270464 + NM_002862 PYGB 1 0.11 0.11 7 6.9 85.76 20 4.3 No 2 0.83 Yes 24 0.74 Yes -22 0.82 Yes 48 78.98 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56296047 - NM_032345 PYM1 1 0.15 0.17 10 7.26 83.43 36 4.89 No 16 1.08 Yes 0 0 No -28 0.85 Yes 42 81.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56308151 - NM_032345 PYM1 1 11.75 7.53 72 10.04 92.17 29 6.48 Yes 16 1.48 Yes 28 0.76 Yes -28 0.84 Yes 42 90.08 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 56309316 - NM_032345 PYM1 1 1.46 0.99 40 5.58 84.17 22 4.85 No 56 1.09 Yes 0 0 No -27 0.67 Yes 43 54.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 56309340 - NM_032345 PYM1 1 0.39 0.28 16 9.42 85.05 29 5.66 Yes 32 1.09 Yes 0 0 No -28 0.46 No 42 79.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 56320992 - NM_032345 PYM1 1 0.23 0.13 8 5.54 76.67 24 8.01 Yes 58 1.65 Yes 0 0 No -26 0.58 No 44 46.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56321052 - NM_032345 PYM1 1 2.07 1.31 52 6.66 78.63 36 6.24 Yes 73 0.45 No 27 0.64 Yes -27 0.58 No 43 62.91 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr12 21609798 + NM_024854 PYROXD1 1 7 2.72 52 5.58 85.99 27 6.1 Yes 46 0.87 Yes 26 0.74 Yes -26 0.58 No 44 66.69 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 49134721 - NR_073590 QARS 1 0.07 0.43 21 9.66 86.79 27 4.91 No 11 1.84 Yes 26 0.93 Yes -26 0.48 No 47 54.09 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 49135526 - NR_073590 QARS 1 0.28 1.29 47 1.95 68.72 21 5.83 Yes 29 0.83 Yes 0 0 No -15 0.41 No 43 54.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49135722 - NR_073590 QARS 1 0.03 0.13 9 4.08 74.94 31 6.02 Yes 59 -2.7 No 19 0.54 Yes -22 0.54 No 48 48.35 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr3 49140166 - NR_073590 QARS 1 0.04 0.13 9 0.13 82.43 26 5.29 No 63 -5.23 No 24 0.92 Yes -25 0.88 Yes 45 35.83 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr3 49140865 - NR_073590 QARS 1 0.29 0.97 38 11.14 87.58 22 5.66 Yes 67 0.5 No 22 0.54 Yes -22 0.46 No 48 46.76 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr4 17489877 - NM_000320 QDPR 1 0.15 0.19 14 4.19 0 42 8.42 Yes 17 -1.42 No 0 0 No -29 0.37 No 29 52.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 17491025 - NM_000320 QDPR 1 0.98 1.14 46 7.17 88.03 33 5.3 No 20 0.2 No 0 0 No -32 0.62 No 38 62.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 17491674 - NM_000320 QDPR 1 0.26 0.25 15 10.71 85.17 25 6 Yes 12 0.93 Yes 0 0 No -24 0.85 Yes 46 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 17500943 - NM_000320 QDPR 1 2.23 1.44 52 9.51 94.69 35 5.83 Yes 35 1.11 Yes 0 0 No -19 0.45 No 36 60.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 163878412 + NM_001301085 QKI 1 0.72 1.6 59 11.86 85.57 28 6.86 Yes 15 0.94 Yes 27 0.86 Yes -27 0.92 Yes 43 96.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr6 163899788 + NM_001301085 QKI 1 0.11 0.25 15 -4.53 61.02 13 4.79 No -4 0.25 No 21 0.59 Yes -20 0.56 No 50 67.66 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr6 163911387 + NM_001301085 QKI 1 0.05 0.11 8 6.59 86.92 27 4.02 No 4 0.65 No 0 0 No -26 0.51 No 44 45.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 163984451 + NM_001301085 QKI 1 1907.38 159.13 72 4.81 81.33 123 11.6 Yes 8 0.97 Yes 20 0.58 Yes -33 0.41 No 37 66.72 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 163984454 + NM_001301085 QKI 1 50.15 4.32 70 3.92 76.63 126 11.72 Yes 11 0.98 Yes 26 0.77 Yes -23 0.54 No 34 63.34 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 163985698 + NM_001301085 QKI 1 0.57 0.61 33 8.14 87.11 18 5.91 Yes 5 1.89 Yes 21 0.6 Yes -17 0.61 No 53 56.43 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr6 163986977 + NM_001301085 QKI 1 12.45 14.01 72 12.44 88.59 30 6.84 Yes 17 1.54 Yes 29 0.91 Yes -29 0.64 No 41 89.04 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 46197333 + NM_017659 QPCTL 1 0.83 0.28 13 10.22 90.85 21 6.32 Yes 8 1.18 Yes 0 0 No -21 0.91 Yes 49 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46198658 + NM_017659 QPCTL 1 5.63 2.03 59 8.87 78.86 31 6.35 Yes 18 0.64 No 27 0.6 Yes -30 0.83 Yes 40 80.78 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 46198728 + NM_017659 QPCTL 1 0.36 0.13 9 2.85 78.48 23 5.83 Yes NA NA NA 0 0 No -22 0.32 No 63 29.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46198859 + NM_017659 QPCTL 1 5.48 1.92 60 1.67 67.34 28 6.14 Yes 15 1.49 Yes 23 0.7 Yes -27 0.84 Yes 43 57.59 No BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 46198890 + NM_017659 QPCTL 1 13.32 4.53 70 5.64 79.2 40 6.32 Yes 46 1.48 Yes 23 0.7 Yes -39 0.5 No 31 81.43 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr19 46202039 + NM_017659 QPCTL 1 0.89 0.42 20 3.06 71.87 22 6.11 Yes 25 -1.51 No 21 0.82 Yes -21 0.77 Yes 49 77.46 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 46202089 + NM_017659 QPCTL 1 0.4 0.22 15 -4.36 70.37 34 5.46 No 75 -1.49 No 0 0 No -33 0.75 Yes 37 87.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 29692520 + NM_014298 QPRT 1 0.2 0.21 12 0.25 75.21 71 9.77 Yes 3 1.83 Yes 0 0 No -22 0.46 No 55 29.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 29708313 + NM_014298 QPRT 1 1.54 0.85 39 2.7 74.13 25 6.16 Yes 12 1.84 Yes 27 0.93 Yes -24 0.96 Yes 46 95.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 29708313 + NM_014298 QPRT 1 7.3 4.64 70 2.7 74.13 25 6.16 Yes 12 1.84 Yes 27 0.93 Yes -24 0.96 Yes 46 95.37 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr3 49068071 - NM_001320581 QRICH1 1 0.1 0.18 13 1.19 0 10 4 No 54 -2.02 No 0 0 No -31 0.57 No 39 76.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 49069701 - NM_001320581 QRICH1 1 0.08 0.17 11 3.26 0 11 3.87 No 67 0.8 Yes 0 0 No -44 0.78 Yes 26 72.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49080300 - NM_001320581 QRICH1 1 0.09 0.13 9 3.56 85.54 23 6.56 Yes 55 0.7 No 0 0 No -27 0.52 No 39 74.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 49104460 - NM_001320581 QRICH1 1 0.17 0.24 14 2.75 0 30 4.74 No 17 0.89 Yes 0 0 No -36 0.53 No 40 53.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49116815 - NM_001320581 QRICH1 1 0.55 0.25 12 10.7 91.35 40 9.8 Yes 27 0.63 No 0 0 No -32 0.73 Yes 38 75.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 107088702 + NM_018292 QRSL1 1 0.11 0.13 8 -1.24 0 73 9.17 Yes 32 0.78 Yes 0 0 No -31 0.46 No 30 62.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 107091770 + NM_018292 QRSL1 1 1.48 1.49 44 2.9 0 65 5.15 No 52 0.77 Yes 0 0 No -53 0.67 Yes 20 76.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 107102717 + NM_018292 QRSL1 1 1.42 1.35 50 5.22 81.33 27 5.06 No 14 0.38 No 0 0 No -26 0.84 Yes 44 85.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 107110940 + NM_018292 QRSL1 1 0.29 0.26 16 2.54 63.17 34 6.32 Yes 21 0.8 Yes 0 0 No -33 0.87 Yes 37 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 32959997 + NM_001076786 QSER1 1 0.32 0.21 13 7.35 80.9 15 5.17 No 2 0.61 No 0 0 No -26 0.63 No 44 52.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 32960749 + NM_001076786 QSER1 1 0.55 0.36 24 3.15 75.56 26 5.98 Yes 13 0.8 Yes 0 0 No -25 0.85 Yes 45 86.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 32969246 + NM_001076786 QSER1 1 1.4 0.93 34 10.03 87.15 31 4.8 No 44 0.73 No 0 0 No -30 0.56 No 40 54.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139124288 - NM_181701 QSOX2 1 0.49 0.13 8 8.25 85.64 35 7.83 Yes 22 0.93 Yes 0 0 No -32 0.43 No 33 44.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10812768 + NM_031209 QTRT1 1 0.18 0.15 9 7.57 76.56 29 5.83 Yes 16 0.23 No 27 0.92 Yes -28 0.71 Yes 38 59.02 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 10812836 + NM_031209 QTRT1 1 0.34 0.32 18 3.28 79.69 30 6 Yes 60 0.89 Yes 29 0.49 Yes -27 0.4 No 43 61.2 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr19 10813923 + NM_031209 QTRT1 1 0.13 0.15 9 6.53 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.64 No 51 83.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 10817385 + NM_031209 QTRT1 1 1.1 1.26 43 6.58 90.58 27 7.79 Yes 14 1.71 Yes 26 0.84 Yes -26 0.85 Yes 44 86.53 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10818141 + NM_031209 QTRT1 1 0.75 0.89 36 8.07 84.61 14 5.74 Yes NA NA NA 26 0.69 Yes -26 0.83 Yes 44 82.51 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10819956 + NM_031209 QTRT1 1 0.19 0.22 13 9.82 89.32 29 5.29 No 54 0.7 No 21 0.71 Yes -21 0.89 Yes 49 92.9 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr19 10823799 + NM_031209 QTRT1 1 0.38 0.4 22 1.93 0 14 3.87 No 11 2.61 Yes 23 0.66 Yes -23 0.63 No 47 79.1 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr3 113794380 + NM_024638 QTRT2 1 0.66 0.32 17 3.96 0 31 6.85 Yes 18 1.59 Yes 0 0 No -30 0.77 Yes 40 86.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 113796322 + NM_024638 QTRT2 1 0.55 0.28 18 9.09 82.19 20 6.24 Yes 7 0.48 No 0 0 No -29 0.55 No 51 84.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 113801399 + NM_024638 QTRT2 1 3.41 2.33 63 9.93 81.09 11 6.86 Yes 71 0.89 Yes 37 0.23 Yes -37 0.64 No 41 66.23 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr3 113801809 + NM_024638 QTRT2 1 2.25 2 53 8.12 93.68 25 6.63 Yes 51 0.05 No 24 0.71 Yes -24 0.72 Yes 46 68.86 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr8 23146555 + NM_001301650 R3HCC1 1 0.17 0.13 9 7.78 78.71 30 6 Yes 40 1.27 Yes 29 0.67 Yes -52 0.33 No 18 73 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 23152971 + NM_001301650 R3HCC1 1 0.8 0.5 21 11.04 89.49 32 6 Yes 25 0.97 Yes 29 0.86 Yes -29 0.88 Yes 41 87.9 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 23153462 + NM_001301650 R3HCC1 1 0.27 0.17 11 -5.88 0 13 4.36 No 55 0.83 Yes 29 0.72 Yes -12 0.36 No NA NA NA BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr10 99916012 + NM_001256619 R3HCC1L 1 6.93 0.38 21 7.62 80.04 14 4.31 No 23 0.77 No 0 0 No -24 0.76 Yes 46 79.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 99917219 + NM_001256619 R3HCC1L 1 18.31 1.44 51 8.38 89.72 22 5.74 Yes 43 1.02 Yes 0 0 No -21 0.47 No 49 67.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 99918973 + NM_001256619 R3HCC1L 1 1.78 0.14 10 4.98 94.21 25 4.72 No 30 1.45 Yes 0 0 No -24 0.76 Yes 46 86.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 99934205 + NM_001256619 R3HCC1L 1 1.69 0.44 22 5.58 90.92 32 6.03 Yes 19 0.75 No 0 0 No -37 0.71 Yes 33 81.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 99946223 + NM_001256619 R3HCC1L 1 33.75 8.33 72 9.84 93.71 28 5.22 No 7 0.32 No 27 0.71 Yes -27 0.62 No 43 61.32 No BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: No chr10 100000254 + NM_001256619 R3HCC1L 1 0.47 0.15 10 8.61 88.48 26 6.96 Yes 55 0.69 No 0 0 No -25 0.51 No 33 41.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 136377094 + NM_001282798 R3HDM1 1 2.37 1.5 51 6.83 86.81 17 6.11 Yes 4 0.74 No 0 0 No -26 0.31 No 40 53.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 136377104 + NM_001282798 R3HDM1 1 0.18 0.11 7 4.07 0 13 4.36 No 14 0.84 Yes 0 0 No -32 0.41 No 44 67.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 136385274 + NM_001282798 R3HDM1 1 0.21 0.28 16 7.78 90.28 17 4.95 No 29 0.83 Yes 0 0 No -20 0.65 No 50 51.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 136391265 + NM_001282798 R3HDM1 1 3.37 5.51 71 8.28 86.94 16 5.6 Yes 3 1.08 Yes 20 0.94 Yes -30 0.59 No 40 50.68 No BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 136394558 + NM_001282798 R3HDM1 1 1.09 2.21 62 11.31 95.1 19 5.91 Yes 44 0.35 No 0 0 No -21 0.69 Yes 49 85.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136406656 + NM_001282798 R3HDM1 1 0.41 0.35 16 9.85 88.27 40 6.15 Yes 43 -2.16 No 26 0.38 Yes -28 0.41 No 44 48.04 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr2 136407471 + NM_001282798 R3HDM1 1 0.22 0.18 9 5.72 81.28 49 7.2 Yes 36 2.07 Yes 29 0.84 Yes -29 0.7 Yes 41 86.49 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr2 136409302 + NM_001282798 R3HDM1 1 62.15 50.72 72 8.5 95.01 28 6.42 Yes 15 1.44 Yes 24 0.9 Yes -27 0.63 No 43 87.58 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 136438063 + NM_001282798 R3HDM1 1 0.17 0.26 16 7.77 86.41 20 6.1 Yes 7 0.81 Yes 0 0 No -32 0.48 No 38 40.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 136453097 + NM_001282798 R3HDM1 1 1.2 2.15 62 6.19 78.05 39 6.62 Yes 33 0.19 No 0 0 No -21 0.69 Yes 49 55.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 136453336 + NM_001282798 R3HDM1 1 0.37 0.65 33 6.69 75.72 15 6.64 Yes 2 0.08 No 0 0 No -21 0.58 No 49 66.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 136460542 + NM_001282798 R3HDM1 1 0.08 0.14 10 8.7 82.36 19 4.9 No 52 0.63 No 0 0 No -26 0.46 No 44 54.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 136473156 + NM_001282798 R3HDM1 1 0.09 0.15 9 3.37 82.4 23 5.02 No 55 2.38 Yes 0 0 No -22 0.86 Yes 48 74.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136477805 + NM_001282798 R3HDM1 1 0.08 0.13 9 12.54 84.02 35 6.76 Yes 55 1.13 Yes 0 0 No -22 0.5 No 36 72.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 136478773 + NM_001282798 R3HDM1 1 0.09 0.14 8 3.14 60.33 25 6.69 Yes 63 0.87 Yes 0 0 No -24 0.83 Yes 46 78.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136479496 + NM_001282798 R3HDM1 1 0.08 0.13 7 -9.89 71.87 30 6.28 Yes -1 0.25 No 0 0 No -30 0.58 No 40 48.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 136480257 + NM_001282798 R3HDM1 1 0.1 0.17 10 11.03 78.3 23 4.66 No 10 0.45 No 0 0 No -25 0.61 No 45 83.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 57649852 - NM_001330122 R3HDM2 1 2.42 1.1 49 -6.8 0 10 3.87 No 51 0.63 No 0 0 No -30 0.72 Yes 42 59.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 57649861 - NM_001330122 R3HDM2 1 0.2 0.11 8 -3.96 0 22 5.1 No 42 0.64 No 0 0 No -21 0.4 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57649927 - NM_001330122 R3HDM2 1 0.61 0.29 18 3.86 80.25 54 7.28 Yes 65 0.85 Yes 0 0 No -17 0.5 No 53 79.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 57686433 - NM_001330122 R3HDM2 1 12.38 1.04 46 0.45 0 16 4.47 No 25 0.59 No 0 0 No -47 0.33 No 52 56.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57686446 - NM_001330122 R3HDM2 1 3.15 0.29 15 -1.01 0 34 5.98 Yes 12 0.6 No 0 0 No -34 0.42 No 40 62.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57686451 - NM_001330122 R3HDM2 1 359.93 28.1 72 7.05 69.31 29 5.56 Yes 7 0.62 No 0 0 No -29 0.49 No 45 68.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57686505 - NM_001330122 R3HDM2 1 11.93 1.03 48 5.28 77.78 73 8.91 Yes 23 0.71 No 0 0 No -36 0.62 No 34 60.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57690310 - NM_001330122 R3HDM2 1 0.22 0.14 8 -3.96 0 16 4.24 No 40 0.48 No 29 0.78 Yes -57 0.82 Yes 13 71.99 Yes BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57691165 - NM_001330122 R3HDM2 1 0.26 0.13 9 -3.62 0 12 3.84 No 9 0.64 No 0 0 No -11 0.49 No 25 26.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 57691675 - NM_001330122 R3HDM2 1 0.56 0.25 11 0.89 78.64 26 4.9 No 13 0.83 Yes 0 0 No -25 0.86 Yes 45 97.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57691678 - NM_001330122 R3HDM2 1 2.1 0.88 42 5.15 92.71 23 4.61 No 10 0.84 Yes 22 0.94 Yes -22 0.88 Yes 48 97.12 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr12 57698345 - NM_001330122 R3HDM2 1 0.18 0.11 8 7.54 79.41 46 6.38 Yes 33 1.42 Yes 0 0 No -23 0.53 No 37 58.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 57699447 - NM_001330122 R3HDM2 1 7.83 4.81 69 13.07 91.15 26 7.33 Yes 13 1.04 Yes 0 0 No -25 0.67 Yes 45 79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 901542 - NM_138774 R3HDM4 1 0.35 0.4 22 -0.4 0 29 5.57 Yes NA NA NA 0 0 No -21 0.51 No 49 44.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 902068 - NM_138774 R3HDM4 1 0.5 0.31 16 3.97 90.89 21 4.9 No 8 -0.33 No 20 0.67 Yes -20 0.7 Yes 50 45.47 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr19 902435 - NM_138774 R3HDM4 1 1.09 0.63 33 9.08 84.58 22 5.29 No 50 0.78 Yes 22 0.42 Yes -21 0.68 Yes 48 64.3 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr19 902628 - NM_138774 R3HDM4 1 1.53 0.89 39 5.63 85.24 32 7.05 Yes 19 2.46 Yes 31 0.83 Yes -31 0.46 No 39 82.29 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 26262235 + NM_016131 RAB10 1 0.03 0.11 7 3.42 83.86 24 5.4 No 60 -3.14 No 0 0 No -30 0.61 No 40 45.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 26283182 + NM_016131 RAB10 1 0.29 1.03 38 9.78 94.28 51 7.21 Yes 38 1.59 Yes 0 0 No -50 0.93 Yes 20 93.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 26316459 + NM_016131 RAB10 1 0.98 3.71 67 11.31 94.92 24 5.85 Yes 44 0.31 No 0 0 No -30 0.57 No 40 55.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 26344237 + NM_016131 RAB10 1 0.25 1.11 48 2.36 84.59 25 5.72 Yes 72 1.93 Yes 0 0 No -24 0.88 Yes 46 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 26346250 + NM_016131 RAB10 1 0.04 0.21 12 4.39 72.44 26 5.78 Yes -2 1.3 Yes 0 0 No -25 0.51 No 45 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 26346851 + NM_016131 RAB10 1 0.46 2.18 59 8.48 86.9 26 6.16 Yes 27 0.91 Yes 0 0 No -25 0.77 Yes 45 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66170101 + NM_004663 RAB11A 1 0.03 0.13 9 -9.96 0 22 6.35 Yes 15 0.96 Yes 0 0 No -27 0.56 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 66170687 + NM_004663 RAB11A 1 0.04 0.26 16 7.32 81.86 28 5.93 Yes 39 1.37 Yes 0 0 No -27 0.88 Yes 43 95.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66175765 + NM_004663 RAB11A 1 0.08 0.56 30 2.54 85.9 26 4.15 No 32 1.19 Yes 0 0 No -25 0.79 Yes 45 56.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 66179556 + NM_004663 RAB11A 1 0.02 0.13 7 5.27 80.25 27 5.14 No 34 1.46 Yes 0 0 No -46 0.72 Yes 24 86.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66180040 + NM_004663 RAB11A 1 0.08 0.56 30 1.57 81.44 30 4.8 No 41 0.92 Yes 25 0.74 Yes -29 0.59 No 35 75.85 Yes BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr8 37728985 - NM_025151 RAB11FIP1 1 1.35 0.69 34 7.88 83.42 32 5.05 No 19 0.74 No 0 0 No -31 0.82 Yes 39 88.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 37730698 - NM_025151 RAB11FIP1 1 36.21 20.14 72 10.36 91.05 32 5.66 Yes 19 2.03 Yes 31 0.91 Yes -31 0.84 Yes 39 89.99 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr10 119768732 - NM_001330167 RAB11FIP2 1 1.74 0.56 23 1.99 0 27 5.57 Yes 14 0.87 Yes 0 0 No -26 0.89 Yes 44 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 119798948 - NM_001330167 RAB11FIP2 1 0.85 0.26 15 -5.33 0 24 7.21 Yes 11 1.02 Yes 0 0 No -23 0.78 Yes 47 73.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 493193 + NM_014700 RAB11FIP3 1 5.61 2.13 62 10.8 88.33 26 5.65 Yes 13 0.5 No 0 0 No -25 0.89 Yes 45 79.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 523624 + NM_014700 RAB11FIP3 1 0.38 0.22 11 8.36 88.27 25 6 Yes 12 1.21 Yes 0 0 No -24 0.83 Yes 46 89.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 523812 + NM_014700 RAB11FIP3 1 1.53 0.76 36 10.04 86.99 34 6.57 Yes 21 0.34 No 0 0 No -33 0.94 Yes 37 91.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 524888 + NM_014700 RAB11FIP3 1 0.32 0.17 11 6.27 78.14 14 5.06 No 69 1.36 Yes 19 0.33 Yes -22 0.51 No 48 65.25 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr16 527502 + NM_014700 RAB11FIP3 1 0.3 0.14 9 11.45 89.19 16 9.16 Yes 3 0.79 Yes 0 0 No -22 0.75 Yes 42 67.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 527990 + NM_014700 RAB11FIP3 1 0.31 0.19 10 6.29 83.35 18 5.66 Yes 5 1.29 Yes 0 0 No -20 0.66 No 50 55.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 541133 + NM_014700 RAB11FIP3 1 29.44 8.35 72 7.01 82.2 50 6.41 Yes 11 1.19 Yes 23 0.87 Yes -23 0.5 No 47 70.34 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr16 547291 + NM_014700 RAB11FIP3 1 9.43 4.08 70 9.42 90.07 24 5.39 No 24 1.97 Yes 23 0.89 Yes -23 0.8 Yes 47 75.93 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr16 548914 + NM_014700 RAB11FIP3 1 0.73 0.29 17 8.88 84.37 27 7.2 Yes 14 2.21 Yes 0 0 No -26 0.88 Yes 44 92.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 553263 + NM_014700 RAB11FIP3 1 1.26 0.46 27 6.47 86.36 15 4.43 No 46 1.48 Yes 0 0 No -21 0.72 Yes 49 83.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 555716 + NM_014700 RAB11FIP3 1 0.65 0.21 12 5.28 83.82 22 6.2 Yes 20 0.54 No 0 0 No -21 0.78 Yes 49 84.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 560661 + NM_014700 RAB11FIP3 1 0.44 0.14 9 -5.92 72.87 26 5.66 Yes 13 1 Yes 0 0 No -25 0.92 Yes 45 92.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 569508 + NM_014700 RAB11FIP3 1 0.42 0.21 10 4.13 72.48 24 5.08 No 11 0.85 Yes 0 0 No -23 0.91 Yes 47 71.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 569732 + NM_014700 RAB11FIP3 1 0.23 0.11 8 3.06 79.21 13 5.29 No 0 1.49 Yes 23 0.74 Yes -27 0.68 Yes 58 38.15 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr16 569756 + NM_014700 RAB11FIP3 1 0.59 0.25 16 -14.1 62.63 27 5.29 No 24 1.46 Yes 0 0 No -26 0.65 No 44 20.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 569759 + NM_014700 RAB11FIP3 1 0.21 0.1 7 -11.97 0 10 3.49 No 27 1.46 Yes 0 0 No -29 0.55 No 45 25.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 569762 + NM_014700 RAB11FIP3 1 0.28 0.14 9 -15.41 0 13 3.87 No 30 1.45 Yes 0 0 No -32 0.55 No 42 29.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 570394 + NM_014700 RAB11FIP3 1 1.03 0.38 19 6.73 84.98 27 5.2 No 14 0.6 No 0 0 No -26 0.92 Yes 44 80.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 8625798 + NM_001025300 RAB12 1 0.89 0.46 22 9.18 88.54 15 5.32 No 11 1.05 Yes 0 0 No -23 0.89 Yes 47 87.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 8626820 + NM_001025300 RAB12 1 0.39 0.24 13 6.74 75.74 67 9.01 Yes 54 2.21 Yes 0 0 No -27 0.67 Yes 43 78.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 8636158 + NM_001025300 RAB12 1 0.37 0.19 12 4.75 79.75 35 5.55 No 35 0.69 No 0 0 No -28 0.6 No 42 71.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 153954913 - NM_002870 RAB13 1 0.12 0.17 9 0.63 0 16 4.12 No 15 1.96 Yes 0 0 No -27 0.73 Yes 43 86.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123945661 - NM_016322 RAB14 1 0.74 1.76 61 2.23 75.43 14 4.02 No 47 0.49 No 0 0 No -45 0.34 No 45 50.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 123949295 - NM_016322 RAB14 1 0.3 0.93 39 -3.05 76.73 30 5.93 Yes 8 0.27 No 0 0 No -29 0.56 No 41 73.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 123954152 - NM_016322 RAB14 1 0.08 0.22 14 11.99 94.87 43 7.5 Yes 2 1.79 Yes 0 0 No -31 0.56 No 39 79.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 27802891 + NM_001256410 RAB18 1 0.05 0.11 7 7.72 79.84 21 5.57 Yes 8 0.52 No 21 0.47 Yes -20 0.73 Yes 50 67.28 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr10 27802983 + NM_001256410 RAB18 1 0.12 0.24 14 6.68 72.72 14 4.96 No 1 1.36 Yes 0 0 No -28 0.27 No 42 36.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 27822664 + NM_001256410 RAB18 1 0.05 0.1 7 -11.03 0 18 6.76 Yes 5 1.33 Yes 0 0 No -24 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 27822869 + NM_001256410 RAB18 1 0.06 0.17 10 -6.02 50.64 23 4.68 No 22 0.13 No 0 0 No -35 0.65 No 35 59.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 65325199 - NM_015543 RAB1A 1 0.03 0.21 15 -29.32 0 20 5.58 Yes 7 0.69 No 0 0 No -26 0.65 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 65349514 - NM_015543 RAB1A 1 0.07 0.25 14 9.44 90.51 31 7.81 Yes 18 1.57 Yes 0 0 No -30 0.92 Yes 40 95.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66037033 + NM_030981 RAB1B 1 0.23 0.97 36 8.76 85.35 46 7.43 Yes 56 0.73 No 0 0 No -28 0.77 Yes 21 68.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 66043524 + NM_030981 RAB1B 1 0.02 0.1 7 -4.82 0 13 4 No 52 2.83 Yes 0 0 No -55 0.38 No 10 14.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 72165121 + NM_014999 RAB21 1 0.09 0.22 13 8.1 80.2 17 5.36 No 4 1.32 Yes 0 0 No -21 0.85 Yes 49 92.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 72165884 + NM_014999 RAB21 1 0.24 0.67 29 4.05 75.22 36 7.77 Yes 23 0.76 No 0 0 No -31 0.52 No 39 65.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 72175944 + NM_014999 RAB21 1 0.04 0.17 10 9.72 82 24 6.78 Yes 55 1.91 Yes 0 0 No -23 0.75 Yes 47 79.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 72176357 + NM_014999 RAB21 1 0.11 0.47 24 -0.98 0 11 3.27 No 18 0.78 Yes 0 0 No -30 0.82 Yes 40 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 56886105 + NM_020673 RAB22A 1 1.37 0.64 31 1.29 0 10 4 No 12 1.37 Yes 0 0 No -32 0.91 Yes 38 87.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 56906417 + NM_020673 RAB22A 1 0.3 0.29 17 6 85.69 28 5.33 No 15 0.74 No 0 0 No -28 0.45 No 42 48.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 56906864 + NM_020673 RAB22A 1 0.29 0.31 16 9.75 84.75 23 3.77 No 33 0.14 No 0 0 No -21 0.64 No 49 86.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 56909585 + NM_020673 RAB22A 1 0.22 0.19 13 8.04 89.95 38 5.68 Yes 40 1.12 Yes 0 0 No -31 0.64 No 33 78.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 56915629 + NM_020673 RAB22A 1 0.13 0.13 9 -8.23 75.3 19 5.15 No 3 0.32 No 0 0 No -21 0.92 Yes 49 94.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 56915635 + NM_020673 RAB22A 1 0.26 0.26 18 1.61 0 13 3.79 No 9 0.3 No 0 0 No -27 0.92 Yes 43 94.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 56918759 + NM_020673 RAB22A 1 0.14 0.15 9 7.62 81.92 61 5.05 No -3 0.48 No 23 0.84 Yes -25 0.8 Yes 45 88.04 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 56920489 + NM_020673 RAB22A 1 0.13 0.17 12 5.91 83.86 52 7.57 Yes 39 0.66 No 23 0.39 Yes -51 0.68 Yes 19 90.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 56924685 + NM_020673 RAB22A 1 0.39 0.47 28 7.45 87.52 24 5.46 No 51 0.04 No 0 0 No -31 0.74 Yes 39 59.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 56929213 + NM_020673 RAB22A 1 0.17 0.21 12 -4.5 74.08 25 5 No 12 0.79 Yes 0 0 No -24 0.94 Yes 46 91.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 56934655 + NM_020673 RAB22A 1 0.24 0.28 19 3.75 0 25 5.7 Yes 12 1.71 Yes 30 0.9 Yes -24 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 176728807 - NM_130781 RAB24 1 0.37 0.36 21 -5.99 83.01 27 5.74 Yes 14 1.44 Yes 0 0 No -26 0.71 Yes 44 92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 55512777 - NM_183235 RAB27A 1 0.08 0.13 7 4.93 68.1 60 6.98 Yes 44 0.3 No 0 0 No -36 0.58 No 34 72.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 55530690 - NM_183235 RAB27A 1 7.67 5.15 69 8.55 86.34 26 5.29 No 49 0.2 No 25 0.85 Yes -25 0.79 Yes 45 85.61 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 55552222 - NM_183235 RAB27A 1 1.98 1.29 49 6.77 75.48 41 6.29 Yes 19 0.03 No 23 0.47 Yes -28 0.65 No 42 55.73 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 55575639 - NM_183235 RAB27A 1 0.46 0.1 7 7.33 88.75 25 5.48 No 29 -1.44 No 0 0 No -24 0.69 Yes 46 77.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 55581749 - NM_183235 RAB27A 1 2.02 0.33 19 4.66 90.26 21 4.9 No 8 0.33 No 0 0 No -20 0.85 Yes 50 80.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 13378771 - NM_001159601 RAB28 1 0.25 0.21 11 -0.8 59.34 43 6.79 Yes 30 0.8 Yes 0 0 No -42 0.58 No 28 74.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 13382368 - NM_001159601 RAB28 1 0.72 0.58 28 8.52 89.54 15 5.8 Yes 37 1.2 Yes 0 0 No -30 0.61 No 40 68.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 13426852 - NM_001159601 RAB28 1 1.31 1.08 46 6.42 82.57 28 7.58 Yes 15 0.42 No 0 0 No -27 0.75 Yes 43 65.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 13426852 - NM_001159601 RAB28 1 0.41 0.33 19 6.42 82.57 28 7.58 Yes 15 0.42 No 0 0 No -27 0.75 Yes 43 65.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 13429862 - NM_001159601 RAB28 1 0.17 0.13 8 4.1 76.04 34 6.89 Yes 21 1.12 Yes 0 0 No -33 0.85 Yes 37 89.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 13434745 - NM_001159601 RAB28 1 0.15 0.11 7 7.53 72.37 61 6.08 Yes 60 1.07 Yes 0 0 No -50 0.85 Yes 20 83.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 13461545 - NM_001159601 RAB28 1 0.68 0.56 27 7.88 80.01 32 6 Yes 19 1.58 Yes 31 0.94 Yes -31 0.91 Yes 39 93.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 13484374 - NM_001159601 RAB28 1 0.7 0.39 22 8.19 88.49 48 7.28 Yes 35 0.36 No 0 0 No -47 0.63 No 23 75.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 205737441 - NM_001135662 RAB29 1 0.14 0.13 8 4.04 71.36 41 7.43 Yes 29 -1.98 No 0 0 No -27 0.37 No 42 33.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 205739602 - NM_001135662 RAB29 1 0.16 0.14 8 -3.72 0 11 3.31 No 45 0.75 No 22 0.91 Yes -40 0.91 Yes 30 91.74 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 205739913 - NM_001135662 RAB29 1 0.23 0.15 10 0.61 75.55 19 4.67 No 54 0.81 Yes 0 0 No -19 0.7 Yes 51 66.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 205740777 - NM_001135662 RAB29 1 1.11 0.86 44 4.77 0 35 5.76 Yes 67 1.16 Yes 29 0.83 Yes -34 0.51 No 36 55.91 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 205742353 - NM_001135662 RAB29 1 0.37 0.17 10 8.6 80.19 20 5.49 No 71 1.04 Yes 0 0 No -26 0.83 Yes 44 89.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 205743659 - NM_001135662 RAB29 1 0.23 0.13 8 7.23 90.85 28 3.64 No 56 -3.15 No 0 0 No -21 0.63 No 49 60.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 205744087 - NM_001135662 RAB29 1 5.02 0.19 12 0.48 61.41 19 5.32 No 6 0.86 Yes 0 0 No -18 0.44 No 52 40.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 205744220 - NM_001135662 RAB29 1 28.21 1.13 43 8.16 88.42 34 5.74 Yes 21 0.31 No 33 0.34 Yes -28 0.75 Yes 42 70.06 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 61473106 + NM_002865 RAB2A 1 0.58 0.6 28 8.57 81.18 27 5.19 No 65 1.1 Yes 0 0 No -26 0.66 No 44 81.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 61475994 + NM_002865 RAB2A 1 0.38 0.43 22 7.86 88.06 24 5.69 Yes 11 0.7 No 0 0 No -23 0.57 No 47 53.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 61482513 + NM_002865 RAB2A 1 0.2 0.22 12 2.27 73.48 31 6.07 Yes 74 -5.19 No 30 0.53 Yes -31 0.61 No 39 76.14 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 61488792 + NM_002865 RAB2A 1 0.46 0.86 34 7.52 96.74 19 6.01 Yes 67 2.08 Yes 26 0.36 Yes -25 0.36 No 46 54.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 61533227 + NM_002865 RAB2A 1 0.04 0.1 7 2.19 0 27 5.95 Yes 14 0.65 No 25 0.86 Yes -20 0.85 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 21934619 - NM_001163380 RAB2B 1 0.31 0.22 14 5.96 90.14 28 4.54 No 58 1.8 Yes 0 0 No -21 0.35 No 45 42.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 21934912 - NM_001163380 RAB2B 1 0.26 0.18 12 6.26 90.2 19 5.38 No 38 0.87 Yes 0 0 No -22 0.42 No 38 64.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 21934932 - NM_001163380 RAB2B 1 0.46 0.31 16 4.25 78.77 53 6.39 Yes 18 0.88 Yes 0 0 No -30 0.79 Yes 40 86.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 21936868 - NM_001163380 RAB2B 1 5.77 4.29 67 8.65 91.32 18 6.54 Yes 76 1.01 Yes 0 0 No -27 0.51 No 50 66.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 21937376 - NM_001163380 RAB2B 1 1.58 1.18 48 9.69 93.33 17 5.2 No 66 0.91 Yes 0 0 No -21 0.82 Yes 49 79.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 21939143 - NM_001163380 RAB2B 1 0.14 0.1 7 8.09 85.61 47 7.7 Yes 56 0.04 No 0 0 No -42 0.64 No 24 69.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 21942323 - NM_001163380 RAB2B 1 0.4 0.31 16 4.98 90.14 16 4.18 No 31 1.29 Yes 0 0 No -47 0.51 No 43 54.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 21942344 - NM_001163380 RAB2B 1 1.03 0.75 34 1.98 0 23 4.86 No 75 1.32 Yes 0 0 No -26 0.86 Yes 44 89.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 82695639 - NM_001286059 RAB30 1 1.27 2.54 60 1.48 0 20 4.58 No 7 0.03 No 0 0 No -19 0.91 Yes 51 89.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 82697045 - NM_001286059 RAB30 1 0.07 0.17 12 4.43 71.18 42 6.94 Yes 29 1.31 Yes 0 0 No -33 0.93 Yes 37 94.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 82697282 - NM_001286059 RAB30 1 0.07 0.17 8 9.49 80.59 29 4.8 No 13 1.15 Yes 0 0 No -28 0.68 Yes 42 52.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 82705149 - NM_001286059 RAB30 1 0.1 0.25 14 10.22 95.02 19 5 No 34 0.81 Yes 30 0.87 Yes -46 0.93 Yes 24 96.49 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 82724813 - NM_001286059 RAB30 1 1.5 0.17 11 9.66 91.75 32 5.65 Yes 19 0.61 No 0 0 No -31 0.61 No 45 59.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 82783679 + NR_038903 RAB30-AS1 1 0.68 0.15 9 -4.87 62.37 22 4.87 No 16 1.19 Yes 0 0 No -21 0.56 No 64 28.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 9722738 + NM_006868 RAB31 1 0.79 0.32 16 5.93 84.7 19 5.65 Yes 6 0.65 No 18 0.71 Yes -18 0.68 Yes 52 82.77 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 120536740 - NM_001167606 RAB35 1 4313.46 221.61 72 5.85 74.55 20 6.16 Yes 7 2.4 Yes 19 0.88 Yes -19 0.85 Yes 51 83.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120538313 - NM_001167606 RAB35 1 0.1 0.21 13 5.76 72.56 46 7.21 Yes 33 1.64 Yes 0 0 No -45 0.81 Yes 25 93.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120541750 - NM_001167606 RAB35 1 0.68 1.1 42 2.4 0 23 7.21 Yes 10 1.65 Yes 0 0 No -22 0.91 Yes 48 86.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120546236 - NM_001167606 RAB35 1 0.88 1.03 41 9.74 85.97 18 5.38 No 48 1.07 Yes 0 0 No -17 0.53 No 53 61.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 120546508 - NM_001167606 RAB35 1 1.41 1.61 52 11.81 88.94 14 5.66 Yes 1 1.11 Yes 28 0.51 Yes -25 0.71 Yes 45 77.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120546643 - NM_001167606 RAB35 1 0.15 0.15 10 8.87 79.75 32 8.19 Yes 23 0.65 No 0 0 No -22 0.63 No 48 61.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 87850929 - NM_022337 RAB38 1 0.13 0.1 7 11.88 91.45 25 5.32 No 67 0.73 No 0 0 No -29 0.51 No 41 60.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 87906740 - NM_022337 RAB38 1 0.15 0.11 7 6.04 80.9 26 6.24 Yes 13 0.29 No 0 0 No -26 0.83 Yes 44 72.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 87907514 - NM_022337 RAB38 1 4.12 2.74 57 7.27 93.66 23 4.61 No 72 0.98 Yes 0 0 No -23 0.7 Yes 47 77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11444191 - NM_004283 RAB3D 1 0.83 0.21 12 9.67 90.44 21 6.08 Yes 49 1.8 Yes 0 0 No -20 0.81 Yes 50 86.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 135810313 + NM_001172435 RAB3GAP1 1 0.11 0.15 8 9.7 88.84 28 5.48 No 15 0.37 No 0 0 No -27 0.93 Yes 43 96.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 135813957 + NM_001172435 RAB3GAP1 1 0.11 0.13 9 5.25 87 20 7.14 Yes 7 1.1 Yes 0 0 No -19 0.82 Yes 51 89.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 135817850 + NM_001172435 RAB3GAP1 1 2.18 2.63 66 2.9 84.41 34 7.8 Yes 21 1.44 Yes 0 0 No -33 0.45 No 36 70.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 135817874 + NM_001172435 RAB3GAP1 1 0.42 0.47 27 3.46 84.95 27 5.14 No 45 1.42 Yes 0 0 No -58 0.36 No 13 78.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 135819913 + NM_001172435 RAB3GAP1 1 0.67 0.79 42 7.94 88.3 28 5.63 Yes 15 0.25 No 0 0 No -28 0.83 Yes 43 67.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 135847220 + NM_001172435 RAB3GAP1 1 0.33 0.38 19 6.7 86.75 31 5.48 No 71 0.57 No 26 0.22 Yes -25 0.43 No 51 41.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 135872789 + NM_001172435 RAB3GAP1 1 0.12 0.17 10 1.52 0 45 6.53 Yes 29 0.67 No 0 0 No -44 0.49 No 41 79.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 135881740 + NM_001172435 RAB3GAP1 1 0.14 0.28 14 1.55 0 9 3.87 No 54 0.47 No 0 0 No -31 0.54 No 39 72.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 135885095 + NM_001172435 RAB3GAP1 1 0.19 0.22 14 6.56 85.02 18 6.91 Yes 71 1.16 Yes 0 0 No -29 0.56 No 43 71.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 135892839 + NM_001172435 RAB3GAP1 1 0.25 0.35 20 -4.03 0 43 5.79 Yes 24 1.34 Yes 0 0 No -36 0.57 No 34 71.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 135918409 + NM_001172435 RAB3GAP1 1 0.08 0.1 7 8.89 87.03 22 4.64 No 53 0.33 No 0 0 No -24 0.64 No 46 81.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 135920148 + NM_001172435 RAB3GAP1 1 0.61 0.68 38 2.37 74.2 27 5.74 Yes 41 1.59 Yes 0 0 No -26 0.6 No 17 51.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 220330827 - NM_012414 RAB3GAP2 1 0.13 0.19 12 -1.03 0 35 6 Yes 22 0.81 Yes 0 0 No -34 0.5 No 36 81.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 220338138 - NM_012414 RAB3GAP2 1 1.92 2.5 63 -4.31 0 47 8.74 Yes 34 1.24 Yes 0 0 No -50 0.58 No 20 62.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 220344450 - NM_012414 RAB3GAP2 1 0.14 0.14 8 7.2 82.3 19 4.67 No 21 0.45 No 0 0 No -33 0.78 Yes 37 79.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 220375711 - NM_012414 RAB3GAP2 1 0.33 0.6 30 -0.07 0 15 3.76 No 60 0.89 Yes 0 0 No -40 0.35 No 33 45.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 220380020 - NM_012414 RAB3GAP2 1 0.36 0.47 22 3.43 81.73 26 5.03 No 52 1.39 Yes 0 0 No -28 0.8 Yes 42 69.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 220383808 - NM_012414 RAB3GAP2 1 0.13 0.21 14 8.4 85.15 27 5.74 Yes 63 -0.61 No 0 0 No -24 0.75 Yes 46 60.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 220384807 - NM_012414 RAB3GAP2 1 0.12 0.18 9 5.89 79.44 14 4.62 No 65 -5.59 No 0 0 No -29 0.68 Yes 41 61.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 220387334 - NM_012414 RAB3GAP2 1 1.46 1.97 55 -3.69 0 19 3.13 No 45 -1.5 No 19 0.68 Yes -43 0.46 No 27 62.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 70180879 + NM_001024647 RAB3IP 1 0.87 0.61 29 10.22 81.86 55 5.94 Yes 61 0.68 No 0 0 No -26 0.5 No 44 58.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 70182008 + NM_001024647 RAB3IP 1 0.28 0.22 15 7.78 86.3 50 7.1 Yes 37 0.82 Yes 0 0 No -28 0.42 No 42 45.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 70189278 + NM_001024647 RAB3IP 1 0.22 0.11 8 2.3 87.12 23 4.8 No 48 -3.28 No 0 0 No -22 0.67 Yes 48 79.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80616439 - NM_006822 RAB40B 1 4.56 0.24 13 3.03 81.68 34 5.39 No 31 1.56 Yes 28 0.77 Yes -28 0.72 Yes 42 83.61 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 80620620 - NM_006822 RAB40B 1 5.33 0.19 13 10.59 86.67 25 5.24 No 12 1.89 Yes 0 0 No -24 0.92 Yes 46 92.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 675036 + NM_001172663 RAB40C 1 2.73 0.22 14 0.92 73.96 19 5 No 20 -2.36 No 18 0.54 Yes -18 0.71 Yes 52 88.01 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 675419 + NM_001172663 RAB40C 1 1.7 0.15 10 -0.44 64.04 20 4.97 No -3 0.64 No 21 0.81 Yes -19 0.73 Yes 51 77.7 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 675884 + NM_001172663 RAB40C 1 0.79 0.1 7 -7.5 62.04 39 6.71 Yes 63 -3.1 No 18 0.4 Yes -25 0.63 No 45 61.2 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 675955 + NM_001172663 RAB40C 1 3.94 0.53 29 2.07 69.04 43 5.92 Yes 61 0.99 Yes 25 0.73 Yes -25 0.63 No 45 56.19 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 56385885 + NM_002868 RAB5B 1 0.81 1.26 52 -2.13 0 46 7.14 Yes 33 0.17 No 0 0 No -38 0.45 No 34 64.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40277912 - NM_201434 RAB5C 1 0.08 0.19 12 -4.52 0 35 7.68 Yes 73 -3.48 No 0 0 No -32 0.35 No 36 47.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40280802 - NM_201434 RAB5C 1 0.06 0.14 8 6.94 84.17 22 5.1 No 9 0.44 No 30 0.92 Yes -21 0.86 Yes 49 87.89 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 40285385 - NM_201434 RAB5C 1 4.83 0.21 12 9.33 84.63 25 5.27 No 12 0.74 No 0 0 No -33 0.8 Yes 37 89.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 73387509 - NM_001243718 RAB6A 1 0.05 0.11 7 8.23 89.21 49 7.96 Yes 36 1.32 Yes 0 0 No -42 0.87 Yes 28 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73389002 - NM_001243718 RAB6A 1 0.13 0.24 15 -9.26 0 9 3.87 No 7 1 Yes 0 0 No -30 0.82 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 128503556 + NM_004637 RAB7A 1 0.03 0.11 8 10.52 89.64 40 6.53 Yes 73 0.59 No 0 0 No -40 0.63 No 30 72.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 128506578 + NM_004637 RAB7A 1 0.03 0.11 8 1.64 0 34 5.43 No 21 0.39 No 0 0 No -34 0.88 Yes 36 91.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 128507756 + NM_004637 RAB7A 1 0.13 0.51 25 5.63 76.02 86 6.84 Yes 41 1.65 Yes 0 0 No -30 0.69 Yes 40 81.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 128515987 + NM_004637 RAB7A 1 0.03 0.17 11 6.46 91.96 24 5.1 No 11 1.21 Yes 0 0 No -23 0.97 Yes 47 98.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 128525216 + NM_004637 RAB7A 1 0.05 0.26 18 -14.13 0 22 5.91 Yes 9 0.53 No 0 0 No -29 0.49 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 128526788 + NM_004637 RAB7A 1 0.06 0.29 12 6.88 77.2 36 6.19 Yes 39 0.89 Yes 0 0 No -32 0.6 No 38 78.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 128529988 + NM_004637 RAB7A 1 0.05 0.25 15 9.37 87.82 22 4.17 No 5 1.06 Yes 0 0 No -21 0.87 Yes 49 80.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16223680 + NM_005370 RAB8A 1 0.02 0.14 9 8.89 90.57 38 6.62 Yes 65 0.52 No 0 0 No -34 0.48 No 36 67.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 16230035 + NM_005370 RAB8A 1 0.04 0.22 14 3.31 82.47 32 6.83 Yes 19 1.8 Yes 0 0 No -31 0.83 Yes 39 78.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16238776 + NM_005370 RAB8A 1 0.18 1.17 45 6.79 0 15 4.58 No 2 0.5 No 0 0 No -19 0.61 No 56 71.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 16240383 + NM_005370 RAB8A 1 0.77 5.78 72 6.72 85.17 30 5.38 No 28 0.7 No 24 0.76 Yes -29 0.58 No 46 41.33 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 16240687 + NM_005370 RAB8A 1 0.68 4.17 70 6.35 79.14 37 5.99 Yes 36 -0.61 No 0 0 No -26 0.57 No 46 63.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 16243025 + NM_005370 RAB8A 1 0.14 0.93 41 -2.3 0 32 5.74 Yes 68 -5.93 No 0 0 No -31 0.83 Yes 39 84.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 63515240 + NM_016530 RAB8B 1 1.69 4.15 70 7.74 86 26 5.45 No 17 1.43 Yes 25 0.86 Yes -25 0.77 Yes 45 86.42 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 63516046 + NM_016530 RAB8B 1 0.62 1.5 52 8.42 83.63 20 6.16 Yes 49 0.77 Yes 19 0.25 Yes -19 0.55 No 33 39.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 63537636 + NM_016530 RAB8B 1 0.29 0.75 34 7.7 77.6 36 5.96 Yes 23 0.71 No 0 0 No -35 0.48 No 35 47.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 63542566 + NM_016530 RAB8B 1 0.33 0.65 35 7.02 86.63 38 4.58 No 21 1.11 Yes 0 0 No -33 0.69 Yes 37 85.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63551829 + NM_016530 RAB8B 1 0.22 0.61 26 -0.2 0 33 7.11 Yes 20 0.8 Yes 0 0 No -32 0.68 Yes 38 80.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63553157 + NM_016530 RAB8B 1 0.06 0.18 10 2.6 60.9 37 6.32 Yes 24 1.23 Yes 0 0 No -36 0.88 Yes 34 93.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63555733 + NM_016530 RAB8B 1 0.06 0.19 13 -2.54 0 11 3.92 No 17 1.65 Yes 0 0 No -29 0.81 Yes 41 71.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 13721853 + NM_004251 RAB9A 1 1.71 2.25 56 4.88 78.43 30 6.4 Yes 17 1.41 Yes 0 0 No -29 0.77 Yes 41 74.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 13721907 + NM_004251 RAB9A 1 0.32 0.43 23 -5.87 0 36 5.99 Yes 71 1.35 Yes 28 0.48 Yes -33 0.36 No 55 33.63 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 13724699 + NM_004251 RAB9A 1 0.24 0.33 20 7.28 85.02 28 6.24 Yes 15 1.4 Yes 0 0 No -27 0.84 Yes 43 91.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 42461043 - NM_006423 RABAC1 1 0.87 1.67 56 8.17 82.9 28 7.06 Yes 52 1.36 Yes 27 0.91 Yes -27 0.86 Yes 43 88.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 42461084 - NM_006423 RABAC1 1 0.1 0.19 12 -12.78 73.24 24 5.48 No 11 1.34 Yes 27 0.91 Yes -23 0.87 Yes 47 83.56 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 5200639 + NM_004703 RABEP1 1 0.37 0.39 22 3.98 76.83 18 5.29 No 29 0.93 Yes 0 0 No -28 0.69 Yes 42 68.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 5200650 + NM_004703 RABEP1 1 0.25 0.29 17 1.98 0 18 4.47 No 40 0.94 Yes 0 0 No -17 0.69 Yes 53 44.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 5238484 + NM_004703 RABEP1 1 0.14 0.4 21 -1.32 0 15 3.87 No 5 1.16 Yes 0 0 No -36 0.69 Yes 34 83.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5239782 + NM_004703 RABEP1 1 7.65 13.67 71 14.24 91.99 24 6.47 Yes 11 1.67 Yes 23 0.88 Yes -28 0.73 Yes 42 59.67 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 5250183 + NM_004703 RABEP1 1 0.06 0.14 9 5.78 88.67 25 3.52 No 75 0.86 Yes 0 0 No -17 0.5 No 53 80.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 5252781 + NM_004703 RABEP1 1 0.99 2.58 57 7.03 83.83 23 5.83 Yes 10 0.1 No 0 0 No -22 0.72 Yes 48 73.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5252784 + NM_004703 RABEP1 1 0.15 0.39 20 6.27 90.38 26 6.08 Yes 13 0.07 No 0 0 No -25 0.64 No 45 65.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 5253762 + NM_004703 RABEP1 1 0.1 0.25 16 -3.79 72.23 23 5.1 No 10 0.89 Yes 0 0 No -22 0.81 Yes 48 75.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5253766 + NM_004703 RABEP1 1 2.61 6.81 72 -5.57 0 27 5.48 No 14 0.88 Yes 0 0 No -26 0.82 Yes 44 71.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5259802 + NM_004703 RABEP1 1 4.78 11.81 72 -9.31 0 62 7.39 Yes 66 0.98 Yes 25 0.71 Yes -55 0.67 Yes 15 88.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 5261656 + NM_004703 RABEP1 1 0.25 0.58 31 9.68 84.77 25 9.2 Yes 12 1.24 Yes 0 0 No -24 0.67 Yes 46 69.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 5284486 + NM_004703 RABEP1 1 0.09 0.21 11 6.64 85.73 33 6.92 Yes 20 1.12 Yes 0 0 No -32 0.71 Yes 38 84.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5285148 + NM_004703 RABEP1 1 0.15 0.31 18 9.37 82.69 53 9.03 Yes 40 1.39 Yes 0 0 No -25 0.84 Yes 45 75.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5286422 + NM_004703 RABEP1 1 0.55 1.21 47 -0.1 0 9 3.87 No 10 1.41 Yes 0 0 No -27 0.74 Yes 43 75.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28917068 - NM_024816 RABEP2 1 1.57 0.94 43 7.17 81.63 23 4.69 No 28 2.57 Yes 0 0 No -40 0.72 Yes 30 58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 28922302 - NM_024816 RABEP2 1 0.82 0.56 25 1 0 13 3.87 No 34 2.11 Yes 0 0 No -30 0.63 No 24 73.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 28923193 - NM_024816 RABEP2 1 0.14 0.11 7 9.67 92.42 32 5.32 No 9 1.16 Yes 0 0 No -21 0.95 Yes 49 93.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28925932 - NM_024816 RABEP2 1 1.48 1.38 51 0.47 78.89 21 5 No 60 -3.82 No 26 0.67 Yes -20 0.56 No 52 35.13 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 28927607 - NM_024816 RABEP2 1 1.12 0.72 34 9.54 85.35 36 6.13 Yes 74 -3.7 No 35 0.41 Yes -35 0.58 No 35 55.37 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 28929251 - NM_024816 RABEP2 1 0.39 0.32 17 0.5 73.02 23 6.54 Yes 10 0.58 No 22 0.7 Yes -27 0.81 Yes 43 78.18 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 28932535 - NM_024816 RABEP2 1 0.76 0.71 36 6.49 91.78 17 5.83 Yes 70 0.88 Yes 20 0.48 Yes -20 0.69 Yes 50 74.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 127963547 + NM_005833 RABEPK 1 0.21 0.15 11 1.66 76.33 25 5 No 62 -5.51 No 0 0 No -24 0.9 Yes 46 91.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127969068 + NM_005833 RABEPK 1 0.21 0.25 15 6.59 86.17 18 5.43 No 24 1.36 Yes 0 0 No -24 0.94 Yes 46 92.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127970835 + NM_005833 RABEPK 1 0.18 0.14 7 8.53 88.27 18 5.39 No 5 1.21 Yes 0 0 No -22 0.63 No 53 79.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 127970997 + NM_005833 RABEPK 1 0.1 0.1 7 5.93 85.02 18 5.39 No 5 1.4 Yes 0 0 No -26 0.65 No 44 78.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 127982605 + NM_005833 RABEPK 1 2.31 1.89 57 7.61 89.69 22 5.83 Yes 9 2.09 Yes 21 0.85 Yes -21 0.76 Yes 49 86.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 127995807 + NM_005833 RABEPK 1 0.66 0.79 35 5.44 80.12 25 6 Yes 12 1.19 Yes 0 0 No -24 0.88 Yes 46 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127995969 + NM_005833 RABEPK 1 0.45 0.53 25 -1.18 59.33 33 5.68 Yes 20 0.58 No 0 0 No -32 0.82 Yes 38 67.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 125707610 + NM_012197 RABGAP1 1 5.37 0.63 31 9.49 87.79 27 5.57 Yes 14 1.87 Yes 26 0.92 Yes -26 0.86 Yes 44 94.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 125719427 + NM_012197 RABGAP1 1 4.8 0.57 31 8.69 91.26 29 4.63 No 30 0.55 No 28 0.69 Yes -28 0.47 No 48 49.6 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 125732374 + NM_012197 RABGAP1 1 0.15 0.14 8 7.42 84.58 23 7.14 Yes 10 1.5 Yes 0 0 No -22 0.91 Yes 48 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 125733943 + NM_012197 RABGAP1 1 0.93 0.81 34 3.97 61.89 28 6.54 Yes 69 -6.26 No 27 0.73 Yes -27 0.73 Yes 43 64.82 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr9 125741207 + NM_012197 RABGAP1 1 0.65 0.56 29 9.05 91.32 52 5.4 No 39 1.11 Yes 0 0 No -26 0.44 No 44 45.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 125758324 + NM_012197 RABGAP1 1 0.61 0.5 27 -0.05 0 51 7.15 Yes 60 -5.7 No 0 0 No -26 0.85 Yes 44 81.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 125758803 + NM_012197 RABGAP1 1 0.6 0.46 27 6.23 72.96 47 6.93 Yes 34 1.1 Yes 21 0.85 Yes -46 0.43 No 29 66.78 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 125758963 + NM_012197 RABGAP1 1 0.18 0.15 7 6.42 69.25 34 5.98 Yes 10 0.66 No 0 0 No -33 0.53 No 33 66.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125760854 + NM_012197 RABGAP1 1 0.42 0.35 21 7.49 88.16 40 6.15 Yes 2 1.24 Yes 23 0.91 Yes -39 0.69 Yes 31 61.24 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 125760899 + NM_012197 RABGAP1 1 0.21 0.15 10 4.53 79.18 22 5.19 No 47 1.56 Yes 0 0 No -26 0.54 No 23 52.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 125766606 + NM_012197 RABGAP1 1 1.35 1.1 46 10.79 85.6 41 9.06 Yes 28 0.95 Yes 0 0 No -40 0.86 Yes 30 89.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 125833690 + NM_012197 RABGAP1 1 6.87 2.67 68 6.21 81.35 27 6.3 Yes 5 0.76 No 26 0.81 Yes -26 0.81 Yes 44 81.36 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 125843318 + NM_012197 RABGAP1 1 0.18 0.11 7 7.56 81.98 25 6.08 Yes 26 -0.02 No 0 0 No -24 0.67 Yes 46 78.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 125843906 + NM_012197 RABGAP1 1 1.65 1.15 50 7.2 86.3 25 7.55 Yes 12 1.38 Yes 0 0 No -24 0.93 Yes 46 92.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 125846921 + NM_012197 RABGAP1 1 0.5 0.35 19 6.59 90.44 31 8.16 Yes 18 1.04 Yes 0 0 No -30 0.74 Yes 40 76.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 125847505 + NM_012197 RABGAP1 1 0.33 0.25 17 10.33 81.63 26 5.53 No 52 0.93 Yes 0 0 No -28 0.6 No 45 79.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 125862287 + NM_012197 RABGAP1 1 0.16 0.13 9 9.77 88.27 25 5.46 No 63 0.91 Yes 0 0 No -24 0.73 Yes 46 91.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174142288 + NM_014857 RABGAP1L 1 0.23 0.24 15 9.34 85.05 26 5.32 No 73 -2.11 No 0 0 No -25 0.71 Yes 45 68.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 174162735 + NM_014857 RABGAP1L 1 2.68 2.6 59 8.22 90.21 30 7.66 Yes 3 2.22 Yes 0 0 No -29 0.75 Yes 41 93.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174188278 + NM_014857 RABGAP1L 1 0.11 0.11 7 -12.8 56.25 19 5 No 23 0.84 Yes 0 0 No -56 0.82 Yes 14 85.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174189489 + NM_014857 RABGAP1L 1 0.75 1.96 57 6.4 82.98 25 4.16 No -4 0.88 Yes 0 0 No -19 0.68 Yes 51 78.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174190087 + NM_014857 RABGAP1L 1 0.2 0.5 28 -3.18 0 19 4.47 No 53 0.3 No 28 0.63 Yes -18 0.57 No 59 23.77 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 174190113 + NM_014857 RABGAP1L 1 0.05 0.13 8 2.2 0 33 5.92 Yes 20 0.07 No 0 0 No -32 0.64 No 38 33.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 174212119 + NM_014857 RABGAP1L 1 0.5 0.94 37 3.4 75.59 39 4.77 No 52 0.31 No 22 0.89 Yes -22 0.83 Yes 48 72.32 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 174212164 + NM_014857 RABGAP1L 1 0.29 0.51 26 3.63 83.28 11 5.74 Yes 75 0.02 No 0 0 No -24 0.56 No 46 62.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 174220927 + NM_014857 RABGAP1L 1 0.46 1 35 7.97 92.14 50 5.35 No 21 1.4 Yes 0 0 No -33 0.95 Yes 37 97.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174221877 + NM_014857 RABGAP1L 1 0.12 0.29 14 6.79 72.88 27 4.57 No 11 1.02 Yes 0 0 No -26 0.39 No 44 66.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 174231169 + NM_014857 RABGAP1L 1 0.06 0.17 9 10.06 88.77 29 6.17 Yes 16 1.64 Yes 0 0 No -28 0.82 Yes 42 89.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174242714 + NM_014857 RABGAP1L 1 1.04 2.36 60 -0.09 67.14 47 7 Yes 34 1.42 Yes 0 0 No -33 0.86 Yes 37 95.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174256817 + NM_014857 RABGAP1L 1 0.1 0.28 14 8.63 95.11 22 5.74 Yes 9 1.11 Yes 0 0 No -26 0.51 No 44 78.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 174288291 + NM_014857 RABGAP1L 1 1.69 2.11 57 12.78 98.8 22 6.37 Yes 63 1.5 Yes 0 0 No -25 0.67 Yes 45 64.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 174289640 + NM_014857 RABGAP1L 1 2.67 3.44 67 5.25 73.57 24 5.7 Yes 11 0.05 No 0 0 No -23 0.7 Yes 47 83.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 174341854 + NM_014857 RABGAP1L 1 0.09 0.17 11 8.9 89.7 31 5.03 No 37 0.94 Yes 0 0 No -31 0.9 Yes 39 94.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174674338 + NM_014857 RABGAP1L 1 0.9 1.22 45 5.78 78.15 29 8.06 Yes 3 0.86 Yes 28 0.83 Yes -28 0.59 No 42 65.19 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 174718493 + NM_014857 RABGAP1L 1 1.48 2.46 59 3.51 0 66 7.47 Yes 53 0.63 No 0 0 No -56 0.74 Yes 14 80.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 174738134 + NM_014857 RABGAP1L 1 0.15 0.19 10 8.05 86.43 24 5 No 30 1.6 Yes 0 0 No -23 0.59 No 47 78.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 174741894 + NM_014857 RABGAP1L 1 0.27 0.32 19 9.47 79.41 26 5.94 Yes 13 1.87 Yes 0 0 No -25 0.68 Yes 45 79.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174777976 + NM_014857 RABGAP1L 1 0.25 0.33 14 5.21 85.02 20 7.14 Yes 7 1.29 Yes 0 0 No -19 0.79 Yes 51 89.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 174777979 + NM_014857 RABGAP1L 1 0.26 0.29 19 3.61 79.69 23 7.35 Yes 10 1.27 Yes 0 0 No -22 0.9 Yes 48 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66214064 + NM_001287060 RABGEF1 1 0.28 0.11 7 5.16 85.64 21 4.8 No 46 1.39 Yes 0 0 No -20 0.62 No 50 64.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 66226112 + NM_001287060 RABGEF1 1 0.53 0.21 13 7.52 83.57 32 7.4 Yes 19 1.07 Yes 0 0 No -31 0.86 Yes 39 86.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66233817 + NM_001287060 RABGEF1 1 35.13 13.51 72 8.13 93.68 23 5.88 Yes 10 1.08 Yes 0 0 No -22 0.9 Yes 48 93.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66235309 + NM_001287060 RABGEF1 1 0.51 0.18 10 8.66 82.89 29 4.67 No 62 0.36 No 32 0.44 Yes -32 0.75 Yes 38 79.25 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 66261604 + NM_001287060 RABGEF1 1 0.36 0.42 22 1.7 0 32 3.82 No 72 -3.2 No 0 0 No -46 0.45 No 27 42.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 66261762 + NM_001287060 RABGEF1 1 3.12 3.71 69 5.02 80.12 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.73 Yes 51 86.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66264311 + NM_001287060 RABGEF1 1 0.12 0.14 10 3.3 77.37 22 6.24 Yes 9 0.55 No 0 0 No -21 0.96 Yes 49 94.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 66265196 + NM_001287060 RABGEF1 1 0.24 0.22 15 7.08 96.29 26 3.61 No 72 0.56 No 0 0 No -21 0.77 Yes 49 78.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 66272824 + NM_001287060 RABGEF1 1 3.69 3.06 68 8.94 85.67 38 6.2 Yes 30 0.43 No 33 0.37 Yes -33 0.42 No 37 62.09 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 24734962 - NM_182836 RABGGTA 1 0.67 0.94 42 -5.64 0 15 4.12 No 61 -2.47 No 27 0.43 Yes -34 0.53 No 56 47.95 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 24735871 - NM_182836 RABGGTA 1 0.53 0.78 33 5.78 79.36 12 5.29 No 71 0.7 No 0 0 No -21 0.42 No 52 28.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24736632 - NM_182836 RABGGTA 1 0.19 0.17 9 11.26 94.92 33 6 Yes 62 1.5 Yes 0 0 No -32 0.85 Yes 38 92.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24738395 - NM_182836 RABGGTA 1 0.45 0.47 24 3.81 78.52 20 4.8 No 70 -5.43 No 32 0.93 Yes -19 0.95 Yes 51 95.96 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 24738608 - NM_182836 RABGGTA 1 0.96 1.03 41 5.65 77.7 27 6.85 Yes 14 2.21 Yes 26 0.93 Yes -26 0.84 Yes 44 85.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 24738758 - NM_182836 RABGGTA 1 0.15 0.13 9 8.13 83.95 69 8.24 Yes 56 1.69 Yes 23 0.79 Yes -23 0.67 Yes 47 78.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 24740205 - NM_182836 RABGGTA 1 5.98 5.11 68 7.25 86.22 21 5 No 55 0.5 No 20 0.75 Yes -20 0.78 Yes 50 87.12 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 24740221 - NM_182836 RABGGTA 1 0.12 0.1 7 -0.63 0 18 4.36 No 74 1.43 Yes 20 0.75 Yes -17 0.55 No 53 32.66 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 24740455 - NM_182836 RABGGTA 1 3.17 1.21 46 5.62 81.54 24 6.4 Yes 11 -0.78 No 23 0.85 Yes -23 0.73 Yes 47 77.94 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 76257151 + NR_073562 RABGGTB 1 0.05 0.13 7 -4.63 0 14 3.75 No 20 0.67 No 0 0 No -32 0.78 Yes 38 87.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 76256114 + NR_073562 RABGGTB 1 2.28 1 42 3.78 67.61 16 4.3 No 62 -4.45 No 23 0.67 Yes -26 0.32 No 44 17.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 76257123 + NR_073562 RABGGTB 1 0.07 0.19 11 4.64 77.15 29 5.66 Yes 22 -2.06 No 26 0.94 Yes -28 0.78 Yes 42 76.86 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 76257881 + NR_073562 RABGGTB 1 5.69 11.35 72 4.54 87.96 24 5 No 11 0.23 No 0 0 No -24 0.8 Yes 46 75.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 114392604 + NM_001306160 RABL2A 1 1.02 0.11 8 -5.41 0 11 4.12 No 21 -2.34 No 23 0.62 Yes -13 0.46 No 21 30.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 51207978 - NM_001130921 RABL2B 1 16.83 2.86 65 6.64 84.96 38 6.1 Yes 25 0.55 No 23 0.69 Yes -25 0.68 Yes 45 73.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 51212045 - NM_001130921 RABL2B 1 1.88 0.89 41 8.33 93.22 36 6.8 Yes 39 1.47 Yes 0 0 No -35 0.7 Yes 35 87.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 51214303 - NM_001130921 RABL2B 1 0.2 0.11 7 -5.47 0 11 4.12 No 21 -2.34 No 25 0.42 Yes -13 0.52 No 21 33.8 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 51220733 - NM_001130921 RABL2B 1 1.1 0.17 10 6.39 81.65 42 7.21 Yes 62 1.31 Yes 0 0 No -41 0.66 No 29 85.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 51220733 - NM_001130921 RABL2B 1 1.25 0.17 12 6.39 81.65 42 7.21 Yes 62 1.31 Yes 0 0 No -41 0.66 No 29 85.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 51220776 - NM_001130921 RABL2B 1 1.13 0.21 11 2.86 0 32 5.74 Yes 19 1.29 Yes 27 0.94 Yes -31 0.86 Yes 39 91.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 51220776 - NM_001130921 RABL2B 1 37.62 4.65 69 2.86 0 32 5.74 Yes 19 1.29 Yes 27 0.94 Yes -31 0.86 Yes 39 91.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 120408951 - NM_173825 RABL3 1 0.53 0.5 28 9.32 83.12 23 5.65 Yes 10 0.62 No 0 0 No -22 0.78 Yes 48 85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 120417368 - NM_173825 RABL3 1 0.29 0.24 16 3.04 72.06 28 5.22 No 66 1.31 Yes 27 0.82 Yes -27 0.63 No 43 86.58 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 120457515 - NM_173825 RABL3 1 1.96 1.65 54 1.85 61.56 26 5.28 No 1 0.29 No 25 0.92 Yes -25 0.9 Yes 45 91.43 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 139722233 + NM_001173988 RABL6 1 0.11 0.31 18 7.94 81.58 19 5 No 6 0.13 No 21 0.39 Yes -23 0.41 No 47 45.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 139728171 + NM_001173988 RABL6 1 1.55 3.22 64 6.34 90.18 24 5.1 No 72 1 Yes 22 0.91 Yes -22 0.92 Yes 51 77.72 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 139728174 + NM_001173988 RABL6 1 0.12 0.25 13 4.03 83.4 27 5.39 No 75 1 Yes 0 0 No -25 0.88 Yes 48 78.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139733765 + NM_001173988 RABL6 1 0.66 1.33 49 8.53 89.86 24 5.48 No NA NA NA 23 0.58 Yes -25 0.34 No 44 46.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 6427744 + NM_018890 RAC1 1 0.08 0.33 20 5.91 85.21 20 6.71 Yes 7 0.42 No 0 0 No -19 0.51 No 47 56.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 37621893 - NM_002872 RAC2 1 0.04 0.38 22 3.16 78.57 26 5.2 No 42 1.19 Yes 0 0 No -25 0.74 Yes 45 70.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37622079 - NM_002872 RAC2 1 0.01 0.1 7 -1.55 0 15 7.26 Yes 2 0.59 No 0 0 No -33 0.35 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 37622856 - NM_002872 RAC2 1 0.02 0.22 12 -0.65 0 23 5.37 No 10 0.23 No 34 0.49 Yes -22 0.9 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 37623869 - NM_002872 RAC2 1 0.07 0.83 35 5.97 81.39 26 3.85 No 13 1.23 Yes 0 0 No -25 0.87 Yes 45 90.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37623984 - NM_002872 RAC2 1 0.17 1.93 57 9.83 88.66 25 4.9 No 12 1.49 Yes 0 0 No -24 0.93 Yes 46 92.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37624475 - NM_002872 RAC2 1 0.01 0.15 7 8.97 97.26 34 5.74 Yes 50 -0.93 No 0 0 No -29 0.5 No 41 65.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 37627421 - NM_002872 RAC2 1 0.01 0.11 7 1.59 0 13 4.36 No 36 1.04 Yes 0 0 No -48 0.56 No 22 84.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 37627998 - NM_002872 RAC2 1 0.01 0.13 7 -0.24 0 26 6.78 Yes 13 1.21 Yes 0 0 No -25 0.95 Yes 45 94.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37628003 - NM_002872 RAC2 1 0.04 0.61 30 5.56 84.56 21 6.4 Yes 8 1.23 Yes 0 0 No -20 0.93 Yes 50 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37628003 - NM_002872 RAC2 1 0.01 0.1 7 5.56 84.56 21 6.4 Yes 8 1.23 Yes 0 0 No -20 0.93 Yes 50 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37629848 - NM_002872 RAC2 1 0.71 10.08 72 10.71 91.86 25 5.57 Yes 51 1.09 Yes 0 0 No -24 0.74 Yes 46 70.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 37633632 - NM_002872 RAC2 1 0.02 0.28 17 -2.02 66.18 50 7.62 Yes 31 0.55 No 0 0 No -43 0.59 No 27 67.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 50386159 - NM_001126104 RACGAP1 1 0.12 0.15 9 -12.01 80.58 24 5.92 Yes 11 0.88 Yes 21 0.91 Yes -23 0.88 Yes 47 84.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 50387822 - NM_001126104 RACGAP1 1 0.26 0.44 24 9.03 87.72 38 6.94 Yes 25 1.61 Yes 0 0 No -37 0.81 Yes 33 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50387934 - NM_001126104 RACGAP1 1 0.07 0.15 8 9.18 86.72 33 6.01 Yes 5 2.18 Yes 0 0 No -32 0.69 Yes 38 81.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50388109 - NM_001126104 RACGAP1 1 0.13 0.22 13 -1.49 0 45 6.69 Yes 50 0.51 No 0 0 No -29 0.57 No 41 38.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 50395821 - NM_001126104 RACGAP1 1 0.15 0.21 14 5.6 90.55 26 5.1 No 47 1.42 Yes 0 0 No -59 0.78 Yes 11 83.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50395844 - NM_001126104 RACGAP1 1 1.01 1.82 54 4.02 83.28 37 7.07 Yes 24 1.45 Yes 0 0 No -36 0.91 Yes 34 88.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50398050 - NM_001126104 RACGAP1 1 0.11 0.14 10 6.92 86.83 25 6.69 Yes 51 1.55 Yes 0 0 No -24 0.76 Yes 46 57.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 50400409 - NM_001126104 RACGAP1 1 0.06 0.1 7 1.21 0 14 4.47 No 74 1.56 Yes 0 0 No -31 0.64 No 39 56.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 50400789 - NM_001126104 RACGAP1 1 0.07 0.11 7 8.62 85.89 31 5.37 No 44 0.83 Yes 0 0 No -25 0.8 Yes 45 84.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50405343 - NM_001126104 RACGAP1 1 0.06 0.1 7 6.83 86.16 104 11.22 Yes 4 0.64 No 0 0 No -28 0.48 No 42 51.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 50410499 - NM_001126104 RACGAP1 1 20.01 3.17 68 -4.48 0 28 6.63 Yes 15 1.59 Yes 20 0.8 Yes -27 0.91 Yes 43 91.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 50412373 - NM_001126104 RACGAP1 1 5.18 0.79 33 7.5 93.21 27 5.29 No 14 0.75 No 26 0.93 Yes -26 0.76 Yes 44 86.5 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 180664320 - NM_006098 RACK1 1 0.23 9.19 72 7.05 86.1 25 3.69 No 38 0.45 No 24 0.94 Yes -24 0.82 Yes 46 89.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 180664713 - NM_006098 RACK1 1 0 0.17 9 -1.47 0 10 4 No 27 0.44 No 20 0.82 Yes -33 0.93 Yes 37 93.86 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 180664719 - NM_006098 RACK1 1 0 0.17 12 -1.36 0 34 4.19 No 21 0.46 No 20 0.82 Yes -27 0.93 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 180665185 - NM_006098 RACK1 1 0 0.14 7 3.74 74.22 29 5.37 No 64 1.12 Yes 0 0 No -28 0.87 Yes 42 83.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 180665231 - NM_006098 RACK1 1 0.01 0.35 21 -4.27 0 12 4.24 No 18 1.15 Yes 27 0.43 Yes -30 0.65 No 40 76 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 180665268 - NM_006098 RACK1 1 0.01 0.29 19 -12.25 0 13 3.47 No 47 -4.1 No 21 0.79 Yes -20 0.42 No 50 29.9 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 180667328 - NM_006098 RACK1 1 0.03 2.28 61 3.34 86.51 25 4.25 No 2 0.96 Yes 24 0.93 Yes -24 0.63 No 21 79.13 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 180667346 - NM_006098 RACK1 1 0.06 4.19 70 2.2 0 32 5.62 Yes 34 0.66 No 31 0.86 Yes -31 0.84 Yes 39 90.71 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 34908957 - NM_002853 RAD1 1 1.04 1.47 55 5.59 88.46 24 5.1 No 11 0.35 No 0 0 No -23 0.68 Yes 47 72.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 34914132 - NM_002853 RAD1 1 5.45 3.18 66 8.49 92.96 30 4.83 No 68 1.04 Yes 29 0.58 Yes -29 0.41 No 45 41.14 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 34914977 - NM_002853 RAD1 1 0.22 0.15 9 9.59 81.95 37 4.53 No -3 1.35 Yes 0 0 No -29 0.52 No 46 62.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68671713 + NM_133339 RAD17 1 0.2 0.25 13 6.89 86.14 20 5.71 Yes 7 2.41 Yes 0 0 No -33 0.55 No 51 54.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68677752 + NM_133339 RAD17 1 0.94 1.07 45 6.62 87 33 5.83 Yes 50 0.88 Yes 0 0 No -27 0.65 No 43 47.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68679798 + NM_133339 RAD17 1 0.25 0.38 18 5.12 88.44 43 6.74 Yes 30 1.4 Yes 0 0 No -42 0.91 Yes 28 95.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 68688968 + NM_133339 RAD17 1 0.15 0.18 10 5.56 83.09 29 4.3 No 50 -2.61 No 20 0.66 Yes -29 0.7 Yes 41 76.47 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 68689032 + NM_133339 RAD17 1 0.07 0.11 8 8.38 85.97 27 6.24 Yes 14 1.44 Yes 0 0 No -26 0.97 Yes 44 96.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 68696069 + NM_133339 RAD17 1 0.15 0.17 12 9.52 91.79 28 3.65 No 55 0.94 Yes 0 0 No -27 0.61 No 43 67.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68704360 + NM_133339 RAD17 1 0.13 0.17 11 5.31 88.76 33 8.87 Yes 20 1.8 Yes 0 0 No -32 0.72 Yes 38 74.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 68706324 + NM_133339 RAD17 1 0.64 0.83 36 0.92 0 67 8.98 Yes 73 0.44 No 23 0.89 Yes -30 0.72 Yes 40 84.29 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 68706340 + NM_133339 RAD17 1 0.48 0.6 32 2.06 81.17 19 4.9 No 6 0.36 No 23 0.89 Yes -23 0.95 Yes 47 82.21 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 8923170 - NM_020165 RAD18 1 0.15 0.1 7 2.97 76.48 17 6.38 Yes 4 0.9 Yes 29 0.52 Yes -22 0.55 No 48 66.56 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 8940682 - NM_020165 RAD18 1 0.52 0.49 27 5.99 74.86 25 5.67 Yes 12 0.95 Yes 0 0 No -24 0.68 Yes 46 71.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 8940727 - NM_020165 RAD18 1 0.59 0.57 30 2.97 0 23 5.56 Yes 10 0.19 No 0 0 No -33 0.59 No 37 57.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 8980369 - NM_020165 RAD18 1 0.48 0.47 26 9.63 90.57 34 5.53 No 21 0.73 No 0 0 No -26 0.8 Yes 44 85.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 8987459 - NM_020165 RAD18 1 2.05 1.56 48 2.66 65.01 49 6.87 Yes 9 0.42 No 0 0 No -48 0.56 No 22 52.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 8998638 - NM_020165 RAD18 1 0.31 0.24 13 8.64 96.21 36 7.91 Yes 23 1.3 Yes 0 0 No -35 0.49 No 35 75.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 9004100 - NM_020165 RAD18 1 0.34 0.17 9 6.41 77.33 34 5.83 Yes 26 0.24 No 0 0 No -28 0.47 No 37 56.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 117861294 - NM_006265 RAD21 1 0.02 0.11 7 4.42 83.73 27 5.75 Yes 74 -3.78 No 27 0.8 Yes -26 0.86 Yes 44 88.66 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 117862998 - NM_006265 RAD21 1 0.03 0.15 8 -1.62 0 12 4.03 No 23 0.12 No 0 0 No -36 0.83 Yes 34 85.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 117863001 - NM_006265 RAD21 1 0.06 0.29 19 -2.65 0 9 3.6 No 20 0.13 No 0 0 No -33 0.82 Yes 37 86.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 117875474 - NM_006265 RAD21 1 0.02 0.13 9 -1.15 72.67 30 4.38 No 28 1.07 Yes 0 0 No -29 0.74 Yes 20 33.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 13058667 + NM_005053 RAD23A 1 0.15 0.43 20 -0.46 0 9 3.87 No 17 0.95 Yes 0 0 No -29 0.91 Yes 41 92.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13059084 + NM_005053 RAD23A 1 0.21 0.94 39 7.1 83.21 29 6.19 Yes 41 0.92 Yes 0 0 No -26 0.83 Yes 44 86.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13059327 + NM_005053 RAD23A 1 0.82 2.46 64 10.38 94.16 27 5.1 No 14 -0.16 No 23 0.58 Yes -26 0.61 No 51 84.43 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 13059936 + NM_005053 RAD23A 1 0.1 0.25 15 1.95 82.91 24 5.48 No 54 -5.32 No 0 0 No -46 0.34 No 53 46.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 13060091 + NM_005053 RAD23A 1 0.06 0.1 7 6.18 83 27 7.14 Yes 14 1.8 Yes 23 0.96 Yes -26 0.91 Yes 44 91.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 13060091 + NM_005053 RAD23A 1 101.71 156.19 72 6.18 83 27 7.14 Yes 14 1.8 Yes 23 0.96 Yes -26 0.91 Yes 44 91.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 110066131 + NM_001244713 RAD23B 1 0.07 0.53 28 5.43 86.59 21 5.2 No 17 0.19 No 0 0 No -20 0.73 Yes 50 74.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131906691 + NM_005732 RAD50 1 0.16 0.28 14 7.61 90.7 33 5.53 No 65 1.29 Yes 0 0 No -32 0.49 No 38 83.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131915523 + NM_005732 RAD50 1 0.07 0.15 9 5.54 85.77 28 4.96 No 38 0.54 No 23 0.77 Yes -30 0.51 No 40 50.76 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 131915584 + NM_005732 RAD50 1 0.27 0.56 28 1.21 73.05 24 4.78 No 63 0.5 No 0 0 No -23 0.37 No 47 43.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131928455 + NM_005732 RAD50 1 3.41 7.03 72 10.81 95.19 19 6.12 Yes 76 1.63 Yes 31 0.69 Yes -18 0.54 No 40 67.91 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 131930253 + NM_005732 RAD50 1 0.34 0.71 35 8.41 78.43 46 5.59 Yes 24 0.64 No 0 0 No -36 0.77 Yes 34 72.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131930795 + NM_005732 RAD50 1 0.14 0.28 17 10.56 94.79 25 6.4 Yes 12 0.58 No 0 0 No -24 0.84 Yes 46 89.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131932833 + NM_005732 RAD50 1 0.13 0.22 11 3.89 72.6 30 5.61 Yes -2 0.49 No 0 0 No -24 0.55 No 41 52.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131935753 + NM_005732 RAD50 1 0.72 1.1 45 11.07 85.8 37 6.04 Yes 24 0.32 No 31 0.69 Yes -31 0.83 Yes 39 80.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 131940526 + NM_005732 RAD50 1 0.05 0.13 8 -3.79 57.91 21 4.38 No 33 0.37 No 0 0 No -24 0.51 No 13 58.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40993264 + NM_001164270 RAD51 1 1.59 1.03 40 3.81 81.05 40 6.51 Yes 52 0.52 No 0 0 No -27 0.61 No 43 73.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40994003 + NM_001164270 RAD51 1 1.44 1.17 46 3.97 84.41 37 6.24 Yes 24 0.42 No 32 0.33 Yes -37 0.48 No 38 60.49 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 41006213 + NM_001164270 RAD51 1 0.17 0.17 8 5.3 84.41 27 6.26 Yes 41 1.34 Yes 0 0 No -33 0.42 No 37 65.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41016115 + NM_001164270 RAD51 1 0.19 0.17 9 10.02 88.17 21 5.95 Yes 8 0.78 Yes 0 0 No -31 0.42 No 39 77.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41021744 + NM_001164270 RAD51 1 0.09 0.1 7 6.94 82.54 15 5.2 No 74 0.07 No 0 0 No -24 0.63 No 41 73.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 4652963 + NM_001130862 RAD51AP1 1 0.12 0.14 9 -0.52 65.58 33 5.53 No 59 0.67 No 0 0 No -35 0.43 No 35 42.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 4654384 + NM_001130862 RAD51AP1 1 4.52 0.82 33 2.84 74.75 35 6.38 Yes 52 0.84 Yes 21 0.35 Yes -35 0.31 No 36 41.89 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 4657491 + NM_001130862 RAD51AP1 1 0.39 0.32 18 9.62 82.72 32 6.79 Yes 19 0.63 No 0 0 No -26 0.83 Yes 44 89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 4662154 + NM_001130862 RAD51AP1 1 0.16 0.13 7 -1.73 0 9 3.87 No 36 1.2 Yes 0 0 No -28 0.61 No 42 65.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 4665596 + NM_001130862 RAD51AP1 1 0.84 1.03 45 7.89 90.9 23 5 No 64 0.31 No 23 0.56 Yes -23 0.5 No 47 52.67 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 68290268 + NM_001321819 RAD51B 1 0.38 0.11 7 -8.9 0 19 4.33 No 63 0.64 No 0 0 No -41 0.55 No 29 79.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68328407 + NM_001321819 RAD51B 1 2.09 0.53 22 7.76 79.26 22 5.29 No 31 2.37 Yes 0 0 No -21 0.47 No 49 65.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68331504 + NM_001321819 RAD51B 1 0.49 0.14 9 5.58 79.77 24 5.46 No 11 1.2 Yes 23 0.79 Yes -23 0.68 Yes 47 85.66 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68368279 + NM_001321819 RAD51B 1 1.25 0.31 13 9.64 91.36 18 5.66 Yes 64 1.34 Yes 0 0 No -17 0.43 No 41 44.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68381507 + NM_001321819 RAD51B 1 0.43 0.13 7 6.47 80.6 32 6.34 Yes 16 0.75 No 0 0 No -31 0.92 Yes 39 93.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68578396 + NM_001321819 RAD51B 1 0.36 0.1 7 4.45 86.52 30 6.04 Yes 11 0.96 Yes 0 0 No -23 0.89 Yes 47 95.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68582535 + NM_001321819 RAD51B 1 1 0.26 17 9.87 93.22 24 5.38 No 61 -3.04 No 0 0 No -24 0.76 Yes 47 46.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68763980 + NM_001321819 RAD51B 1 2.37 0.39 22 11.05 88.74 22 5.19 No 9 0.23 No 0 0 No -21 0.68 Yes 42 64.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68764499 + NM_001321819 RAD51B 1 1 0.1 7 2.92 71.9 25 6.28 Yes 52 1.02 Yes 0 0 No -30 0.67 Yes 40 49.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68778755 + NM_001321819 RAD51B 1 0.96 0.21 15 9.97 96.39 24 8.19 Yes 49 0.52 No 0 0 No -23 0.71 Yes 47 78.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68811839 + NM_001321819 RAD51B 1 2.57 0.46 26 9.87 97.75 21 9.44 Yes 8 1.08 Yes 0 0 No -24 0.43 No 49 44.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68853829 + NM_001321819 RAD51B 1 1.02 0.21 15 8.2 79.76 24 8.47 Yes 11 2.31 Yes 26 0.19 Yes -23 0.57 No 47 73.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 56770711 + NM_058216 RAD51C 1 0.84 1.26 47 4.37 81.39 30 7 Yes 13 0.26 No 25 0.85 Yes -29 0.66 No 41 58.31 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 56772294 + NM_058216 RAD51C 1 0.23 0.35 19 0.25 76.24 39 6.32 Yes 26 0.87 Yes 0 0 No -38 0.76 Yes 32 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56777235 + NM_058216 RAD51C 1 1.51 1.65 47 2.58 0 23 4.83 No 10 0.47 No 0 0 No -22 0.57 No 48 81.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56780637 + NM_058216 RAD51C 1 0.68 0.61 31 5.11 76.37 46 6.98 Yes 21 0.99 Yes 0 0 No -33 0.73 Yes 37 71.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56783238 + NM_058216 RAD51C 1 3.35 5.15 69 7.92 81.27 33 9.45 Yes 20 0.87 Yes 32 0.8 Yes -32 0.89 Yes 38 95.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 56783849 + NM_058216 RAD51C 1 1.11 1.79 56 9.11 90.97 30 5.81 Yes 4 1.13 Yes 29 0.55 Yes -29 0.64 No 41 64.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 56787956 + NM_058216 RAD51C 1 0.39 0.81 37 8.67 86.57 46 6.85 Yes 33 0.62 No 0 0 No -23 0.56 No 46 36.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56797876 + NM_058216 RAD51C 1 0.67 1.46 45 5.92 92.88 27 5.2 No 41 0.18 No 0 0 No -26 0.52 No 44 76.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56809841 + NM_058216 RAD51C 1 0.3 0.43 23 5.67 82.5 17 4.91 No 22 0.49 No 34 0.72 Yes -34 0.72 Yes 36 82.72 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 56809841 + NM_058216 RAD51C 1 0.28 0.47 29 5.67 82.5 17 4.91 No 22 0.49 No 34 0.72 Yes -34 0.72 Yes 36 82.72 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 56803052 + NM_058216 RAD51C 1 0.15 0.25 16 3.51 69.22 41 5.03 No 12 1.03 Yes 0 0 No -24 0.81 Yes 46 77.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56807546 + NM_058216 RAD51C 1 2 3.22 66 4.74 84.41 35 5.97 Yes 22 1.08 Yes 0 0 No -34 0.61 No 36 58.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56809841 + NM_058216 RAD51C 1 4.99 7.96 72 5.67 82.5 17 4.91 No 22 0.49 No 34 0.72 Yes -34 0.72 Yes 36 82.72 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 33434142 - NM_133629 RAD51D 1 5.08 0.47 25 9.18 81.24 22 5.59 Yes 9 0.08 No 0 0 No -21 0.65 No 49 77.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33434467 - NM_133629 RAD51D 1 150.2 14.69 72 7.35 85.04 37 9.52 Yes 24 2.54 Yes 0 0 No -36 0.67 Yes 34 91.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33444057 - NM_133629 RAD51D 1 10.84 1.13 47 1.83 72.97 23 4.96 No 73 -5.06 No 22 0.94 Yes -22 0.94 Yes 48 94.26 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 33445639 - NM_133629 RAD51D 1 249.88 23.51 72 2.43 78.8 24 5.2 No 67 -2.87 No 23 0.96 Yes -23 0.72 Yes 47 85.94 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 33433202 - NR_037714 RAD51L3-RFFL 1 0.3 0.1 7 5.64 75.78 34 6.62 Yes 6 0.71 No 0 0 No -33 0.61 No 37 76.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33433269 - NR_037714 RAD51L3-RFFL 1 9.02 2.54 65 5.43 90.4 27 7.06 Yes 14 1.03 Yes 26 0.81 Yes -26 0.72 Yes 44 88.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 1023696 - NR_123713 RAD52 1 1.92 0.15 11 1.43 65.08 35 5.28 No 22 1.24 Yes 0 0 No -40 0.61 No 30 75.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 95384428 - NM_012415 RAD54B 1 0.62 0.26 17 10.57 89.64 28 5.65 Yes 15 0.74 No 0 0 No -27 0.82 Yes 43 85.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95391767 - NM_012415 RAD54B 1 1.28 0.58 14 3.41 72.41 21 5 No 52 -4.98 No 0 0 No -20 0.84 Yes 50 97.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95399280 - NM_012415 RAD54B 1 0.98 0.49 24 4.7 75.2 30 7.17 Yes 17 1.47 Yes 0 0 No -24 0.56 No 41 74.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 95399452 - NM_012415 RAD54B 1 0.4 0.17 11 8.96 73.84 31 6.49 Yes 18 1.51 Yes 0 0 No -30 0.77 Yes 40 69.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 95411794 - NM_012415 RAD54B 1 3.59 1.35 56 7.14 83.2 36 6.05 Yes 73 1.03 Yes 0 0 No -35 0.86 Yes 35 73.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 95413697 - NM_012415 RAD54B 1 0.3 0.17 10 -4.98 0 68 4.9 No 47 -2.66 No 0 0 No -35 0.71 Yes 35 84.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95413701 - NM_012415 RAD54B 1 1.4 0.61 34 2.57 76.89 64 4.78 No 43 -2.66 No 0 0 No -31 0.8 Yes 39 85.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 95417917 - NM_012415 RAD54B 1 0.73 0.46 23 -0.85 0 52 6.81 Yes 32 1.51 Yes 0 0 No -44 0.79 Yes 26 81.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 95417921 - NM_012415 RAD54B 1 3.04 2.18 62 6.6 76.61 48 6.6 Yes 28 1.53 Yes 0 0 No -40 0.79 Yes 30 77.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 95431012 - NM_012415 RAD54B 1 2.96 1.24 48 2.37 82.24 25 4.78 No 39 0.78 Yes 0 0 No -24 0.68 Yes 46 43.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 46714157 + NM_003579 RAD54L 1 0.44 0.22 12 -1.3 0 21 4.47 No 62 -4.16 No 24 0.53 Yes -20 0.46 No 57 56.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 46721777 + NM_003579 RAD54L 1 0.3 0.26 16 5.36 0 32 4.5 No 23 0.33 No 0 0 No -31 0.78 Yes 39 91.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 46723413 + NM_003579 RAD54L 1 0.22 0.18 10 7.17 84.19 44 6.22 Yes 31 1.77 Yes 0 0 No -30 0.84 Yes 40 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46724633 + NM_003579 RAD54L 1 0.36 0.19 13 5.67 79.37 24 6 Yes 11 2.09 Yes 0 0 No -23 0.92 Yes 47 94.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 46726530 + NM_003579 RAD54L 1 1.08 0.38 17 2.33 82.05 22 6.18 Yes 9 0.81 Yes 24 0.85 Yes -21 0.72 Yes 49 70.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 46726530 + NM_003579 RAD54L 1 1.97 0.68 35 2.33 82.05 22 6.18 Yes 9 0.81 Yes 24 0.85 Yes -21 0.72 Yes 49 70.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 46726935 + NM_003579 RAD54L 1 0.15 0.1 7 1.79 79.24 35 6.76 Yes 60 1.79 Yes 31 0.88 Yes -34 0.73 Yes 36 66.27 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 46737039 + NM_003579 RAD54L 1 0.59 0.26 15 9.33 72.39 66 8.17 Yes 53 0.61 No 0 0 No -28 0.53 No 41 43.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46739221 + NM_003579 RAD54L 1 0.24 0.11 8 4.12 82.69 20 5.1 No 69 1.51 Yes 0 0 No -19 0.57 No 51 71.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 46739261 + NM_003579 RAD54L 1 0.25 0.11 8 -0.12 63.27 24 5.2 No 31 -3.19 No 24 0.52 Yes -23 0.6 No 47 42.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 46739265 + NM_003579 RAD54L 1 1.55 0.71 37 -8.5 0 28 5.57 Yes 35 -3.44 No 24 0.52 Yes -27 0.56 No 43 19.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 46743492 + NM_003579 RAD54L 1 0.21 0.13 9 5.35 0 30 7.1 Yes 17 1.15 Yes 0 0 No -29 0.83 Yes 41 73.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51585472 + NM_001322257 RAD54L2 1 2.31 0.92 42 12.08 92.63 23 6.71 Yes 10 1.43 Yes 0 0 No -22 0.9 Yes 48 90.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51603420 + NM_001322257 RAD54L2 1 0.9 0.4 22 9.95 88.27 24 9.9 Yes 11 1.29 Yes 0 0 No -23 0.8 Yes 47 80.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51606837 + NM_001322257 RAD54L2 1 3.07 1.25 54 5.91 85.02 18 5.39 No 5 1.09 Yes 0 0 No -17 0.59 No 53 80.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 51606840 + NM_001322257 RAD54L2 1 8.52 3.64 71 4.8 80.12 21 5.66 Yes 8 1.06 Yes 0 0 No -20 0.79 Yes 50 86.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51649568 + NM_001322257 RAD54L2 1 0.35 0.19 9 5.12 84.44 27 6.13 Yes 7 0.47 No 0 0 No -26 0.72 Yes 44 71.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 51667932 + NM_001322257 RAD54L2 1 0.41 0.18 10 1.99 84.94 20 4.8 No 48 0.91 Yes 32 0.24 Yes -19 0.88 Yes 51 91.24 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 51675038 + NM_001322257 RAD54L2 1 0.43 0.26 17 4.44 83.78 40 7.07 Yes 27 1.3 Yes 0 0 No -39 0.74 Yes 31 87.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51675768 + NM_001322257 RAD54L2 1 0.62 0.36 21 2.05 0 27 6.48 Yes 14 0.91 Yes 0 0 No -26 0.72 Yes 44 82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51681243 + NM_001322257 RAD54L2 1 0.38 0.22 14 9.81 98.64 28 6.15 Yes 43 0.28 No 0 0 No -27 0.44 No 42 48.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67159851 + NM_004584 RAD9A 1 2 0.61 25 7.01 91.12 26 5.66 Yes -2 -0.52 No 0 0 No -25 0.96 Yes 45 96.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 67160196 + NM_004584 RAD9A 1 2.37 0.71 33 10.21 86.45 55 8.27 Yes 42 1.77 Yes 0 0 No -35 0.69 Yes 35 74.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67161008 + NM_004584 RAD9A 1 2.8 0.92 40 -6.96 55.94 49 7.13 Yes 50 0.59 No 19 0.87 Yes -48 0.49 No 22 74.71 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 67161193 + NM_004584 RAD9A 1 13.69 3.69 69 10.04 91.25 18 5.48 No 40 1.01 Yes 24 0.55 Yes -17 0.86 Yes 53 92.93 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 67161364 + NM_004584 RAD9A 1 1.41 0.36 21 10.45 91.49 30 5.64 Yes 71 0.66 No 0 0 No -27 0.72 Yes 41 54.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67163386 + NM_004584 RAD9A 1 4.69 1.1 43 0.47 0 26 6.08 Yes 13 0.36 No 0 0 No -25 0.8 Yes 45 69.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 55929820 + NM_001015885 RAE1 1 0.23 0.24 16 7.56 80.8 29 4.96 No 56 1.43 Yes 0 0 No -28 0.64 No 42 78.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 55947725 + NM_001015885 RAE1 1 0.16 0.25 15 10.32 81.84 31 5.48 No 67 0.16 No 0 0 No -29 0.47 No 47 30.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 55951234 + NM_001015885 RAE1 1 0.95 1.44 53 9 90.1 30 6.4 Yes -2 1.42 Yes 0 0 No -29 0.83 Yes 41 74.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 12626906 - NM_002880 RAF1 1 0.19 0.33 21 3.53 77.37 16 4.69 No 3 1.08 Yes 0 0 No -15 0.6 No 55 81.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 12627281 - NM_002880 RAF1 1 0.13 0.18 10 3.56 84.05 21 5.19 No 45 1.72 Yes 0 0 No -20 0.46 No 46 45.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 12627293 - NM_002880 RAF1 1 0.08 0.11 7 -16.17 0 9 3.87 No 33 1.72 Yes 0 0 No -18 0.44 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 12627301 - NM_002880 RAF1 1 0.31 0.46 21 -13.9 0 26 5 No 25 1.71 Yes 27 0.5 Yes -10 0.8 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 12632425 - NM_002880 RAF1 1 0.05 0.13 7 -2.74 60.57 34 7.6 Yes 21 0.34 No 0 0 No -33 0.52 No 37 39.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 12633289 - NM_002880 RAF1 1 0.06 0.14 9 -13 69.72 24 6.3 Yes 72 0.81 Yes 0 0 No -23 0.86 Yes 47 73.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 12633351 - NM_002880 RAF1 1 0.15 0.33 18 7.7 71.83 27 6.28 Yes 10 0.84 Yes 0 0 No -22 0.86 Yes 48 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 12640725 - NM_002880 RAF1 1 0.17 0.35 20 10.52 83.03 23 5.52 No 10 1.32 Yes 27 0.86 Yes -22 0.47 No 48 64.36 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 12641767 - NM_002880 RAF1 1 0.45 1.21 47 3.04 0 15 4.56 No -4 1.7 Yes 0 0 No -48 0.92 Yes 22 92.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 12645037 - NM_002880 RAF1 1 0.25 0.64 33 5.45 71.44 62 8.28 Yes 3 0.88 Yes 32 0.81 Yes -32 0.41 No 38 64.46 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 12647820 - NM_002880 RAF1 1 0.08 0.17 8 -4.29 0 21 4.58 No 25 1.43 Yes 29 0.71 Yes -20 0.46 No 55 38.46 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 12664495 - NM_002880 RAF1 1 0.3 0.38 23 6.77 82.65 22 5.83 Yes 13 0.24 No 0 0 No -25 0.67 Yes 44 64.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 12667919 - NM_002880 RAF1 1 0.67 0.83 42 5.39 94.63 24 5.66 Yes 11 0.9 Yes 0 0 No -23 0.67 Yes 47 90.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 12704560 - NM_002880 RAF1 1 0.16 0.21 13 9.5 88.37 21 5.79 Yes 8 0.72 No 0 0 No -20 0.93 Yes 50 94.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17586859 + NM_030665 RAI1 1 13.05 1.68 55 11.47 85.9 21 5.91 Yes 71 -2.82 No 28 0.49 Yes -28 0.59 No 42 65.6 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 17705406 + NM_030665 RAI1 1 0.75 0.21 12 8.8 82.73 23 7.87 Yes 10 1.55 Yes 0 0 No -22 0.79 Yes 48 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 17714047 + NM_030665 RAI1 1 1.42 0.47 20 9.88 85.48 52 7.62 Yes 58 -2.68 No 23 0.6 Yes -33 0.66 No 47 47.87 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 39663929 + NM_005402 RALA 1 1.43 1.89 54 9.21 91.96 55 7.81 Yes 54 0.19 No 0 0 No -30 0.19 No 16 60.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 39663949 + NM_005402 RALA 1 0.09 0.13 8 2.07 77.46 18 4.74 No 74 0.17 No 0 0 No -22 0.35 No 53 30.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 39696749 + NM_005402 RALA 1 0.34 0.44 23 4.45 83.82 24 5.1 No 11 0.5 No 0 0 No -23 0.93 Yes 47 96.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 39704789 + NM_005402 RALA 1 0.24 0.32 20 -2.29 0 70 8.66 Yes 57 1.37 Yes 0 0 No -31 0.52 No 39 77.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 39704824 + NM_005402 RALA 1 5.39 6.82 72 8.03 84.66 42 5.62 Yes 29 0.98 Yes 0 0 No -27 0.73 Yes 43 82.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 39737006 + NM_005402 RALA 1 0.45 1.08 40 8.78 85.91 41 7.14 Yes 67 1.29 Yes 31 0.52 Yes -40 0.37 No 31 56.59 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 121036190 + NM_002881 RALB 1 21.95 6.14 71 6.55 83.21 22 5.29 No 9 1.27 Yes 21 0.69 Yes -21 0.86 Yes 49 84.54 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 121038410 + NM_002881 RALB 1 0.68 0.79 36 10.91 90.08 23 4.82 No 10 1.04 Yes 22 0.77 Yes -22 0.71 Yes 48 69.36 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 121048968 + NM_002881 RALB 1 0.13 0.17 11 7.94 80.64 28 7.08 Yes 48 1.05 Yes 0 0 No -28 0.82 Yes 42 83.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 9476191 + NM_006788 RALBP1 1 0.38 0.15 10 11.01 90.83 40 5.96 Yes 75 -0.67 No 0 0 No -39 0.88 Yes 31 79.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 9535674 + NM_006788 RALBP1 1 0.19 0.22 10 -6.49 0 10 3.05 No 67 2.23 Yes 0 0 No -31 0.54 No 36 63.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 36044331 - NM_001346249 RALGAPA1 1 0.36 0.11 8 4.51 84.41 29 7.11 Yes 40 -2.62 No 0 0 No -24 0.55 No 44 64.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 36094779 - NM_001346249 RALGAPA1 1 1.32 0.35 20 9.71 87.48 27 6.45 Yes 14 1.36 Yes 0 0 No -26 0.46 No 44 80.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 36104350 - NM_001346249 RALGAPA1 1 0.34 0.13 8 5.8 90.92 28 5.27 No 36 0.89 Yes 0 0 No -27 0.69 Yes 43 38.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 36133736 - NM_001346249 RALGAPA1 1 0.77 0.28 18 0.54 66.37 49 8.24 Yes 36 0.71 No 0 0 No -52 0.45 No 18 66.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 36133754 - NM_001346249 RALGAPA1 1 1.08 0.4 16 -1.01 0 31 7.07 Yes 64 1.24 Yes 0 0 No -31 0.45 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 36143430 - NM_001346249 RALGAPA1 1 3.91 2.5 62 7.67 81.98 28 5.33 No 7 2.05 Yes 0 0 No -27 0.67 Yes 43 64.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 36194353 - NM_001346249 RALGAPA1 1 0.34 0.15 9 -1.89 0 16 2.9 No 15 1 Yes 0 0 No -27 0.89 Yes 43 88.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 36215877 - NM_001346249 RALGAPA1 1 0.62 0.19 12 12.2 92.05 80 8.62 Yes 4 0.45 No 0 0 No -22 0.64 No 48 70.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 36218333 - NM_001346249 RALGAPA1 1 0.5 0.21 12 4.19 78.7 23 5.15 No 10 1.56 Yes 0 0 No -22 0.72 Yes 48 83.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 36218371 - NM_001346249 RALGAPA1 1 1.29 0.57 29 7.46 84.74 29 5.24 No 16 1.29 Yes 0 0 No -28 0.72 Yes 42 77.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 36230208 - NM_001346249 RALGAPA1 1 0.22 0.11 7 1.45 0 36 7.96 Yes 5 0.01 No 0 0 No -36 0.29 No 40 50.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 36241977 - NM_001346249 RALGAPA1 1 0.29 0.14 9 10 81.81 32 6.93 Yes -3 0.68 No 0 0 No -31 0.82 Yes 39 75.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 36277104 - NM_001346249 RALGAPA1 1 5.45 2.5 60 4.81 68.39 36 6 Yes -4 0.25 No 23 0.46 Yes -23 0.47 No 47 48.67 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 20374439 - NM_020343 RALGAPA2 1 1.12 0.24 14 9.78 89.08 23 6.05 Yes 10 0.62 No 0 0 No -22 0.87 Yes 48 85.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 20469856 - NM_020343 RALGAPA2 1 0.37 0.1 7 7.74 80.7 41 6.71 Yes 28 1.71 Yes 0 0 No -40 0.9 Yes 30 97.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 20485818 - NM_020343 RALGAPA2 1 0.95 0.25 14 8.38 89.57 64 6.75 Yes 26 1.11 Yes 0 0 No -27 0.73 Yes 43 74.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 20514227 - NM_020343 RALGAPA2 1 0.42 0.14 8 7.25 90.86 71 8.98 Yes 58 1.35 Yes 0 0 No -35 0.71 Yes 35 59.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 20552536 - NM_020343 RALGAPA2 1 2.43 0.99 44 8.86 84.1 25 5.29 No 12 1.35 Yes 0 0 No -24 0.77 Yes 46 79.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 20553709 - NM_020343 RALGAPA2 1 0.96 0.28 16 -1.83 0 27 5.57 Yes 14 0.68 No 0 0 No -26 0.89 Yes 44 85.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 20583267 - NM_020343 RALGAPA2 1 1 0.29 13 4.54 75.38 26 5.14 No 42 1.27 Yes 0 0 No -25 0.88 Yes 45 66.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 20633116 - NM_020343 RALGAPA2 1 1.95 0.36 20 8.04 82.9 31 5.87 Yes 8 0.19 No 0 0 No -30 0.74 Yes 40 86.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 20634463 - NM_020343 RALGAPA2 1 0.74 0.28 19 -3.05 87.67 34 5.74 Yes 21 0.66 No 0 0 No -33 0.54 No 39 72.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 37124421 + NM_020336 RALGAPB 1 5.8 6.35 72 7.3 83.72 28 4.64 No 70 0.75 No 0 0 No -27 0.7 Yes 43 63.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 37125963 + NM_020336 RALGAPB 1 0.27 0.32 18 11.37 93.87 25 5.48 No 12 1.12 Yes 25 0.75 Yes -24 0.83 Yes 46 83.38 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 37125999 + NM_020336 RALGAPB 1 0.14 0.18 10 5.33 0 26 6 Yes 48 1.09 Yes 0 0 No -25 0.85 Yes 45 81.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37126035 + NM_020336 RALGAPB 1 0.42 0.47 25 4.46 84.74 21 5.15 No 49 0.92 Yes 0 0 No -24 0.86 Yes 46 68.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 37126122 + NM_020336 RALGAPB 1 0.93 1.03 40 10.4 93.24 20 5.66 Yes 7 1.08 Yes 19 0.8 Yes -19 0.92 Yes 51 94.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 37139123 + NM_020336 RALGAPB 1 0.17 0.13 9 8.86 82.79 29 6.02 Yes 52 2.13 Yes 0 0 No -28 0.86 Yes 42 86.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37144889 + NM_020336 RALGAPB 1 1.61 1.32 46 7.29 82.93 22 4.19 No 65 1.03 Yes 0 0 No -22 0.53 No 48 61.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 37153563 + NM_020336 RALGAPB 1 0.53 0.43 24 6.77 89.01 28 6.38 Yes 55 1.44 Yes 0 0 No -27 0.94 Yes 43 89.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37153563 + NM_020336 RALGAPB 1 1.97 1.58 50 6.77 89.01 28 6.38 Yes 55 1.44 Yes 0 0 No -27 0.94 Yes 43 89.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37154150 + NM_020336 RALGAPB 1 0.79 0.79 34 4.46 81.12 46 8.06 Yes 33 1.37 Yes 0 0 No -45 0.92 Yes 25 94.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37163728 + NM_020336 RALGAPB 1 103.72 37.42 72 2.5 0 22 4.58 No 53 1.49 Yes 25 0.52 Yes -19 0.73 Yes 51 68.48 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 37167332 + NM_020336 RALGAPB 1 0.6 0.43 26 4.98 76.68 19 5.01 No 54 -5.31 No 0 0 No -18 0.47 No 52 72.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 37180447 + NM_020336 RALGAPB 1 0.18 0.21 12 5.66 78.32 13 3.79 No 0 0.91 Yes 0 0 No -21 0.84 Yes 49 81.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 37193998 + NM_020336 RALGAPB 1 90.24 38.36 72 6.37 92.89 23 5 No 10 1.4 Yes 22 0.85 Yes -22 0.55 No 52 60.43 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 37198535 + NM_020336 RALGAPB 1 0.25 0.22 14 0.07 0 64 8.09 Yes 51 1.41 Yes 0 0 No -36 0.47 No 25 43.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 135974889 - NM_006266 RALGDS 1 0.22 0.26 16 9.89 92.6 35 5.94 Yes 22 0.46 No 0 0 No -22 0.6 No 48 65.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135977020 - NM_006266 RALGDS 1 0.21 0.11 7 3.32 82.78 19 4.68 No 68 0.35 No 0 0 No -18 0.74 Yes 52 49.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 135977208 - NM_006266 RALGDS 1 0.25 0.13 9 3.95 79.51 22 5 No 21 0.03 No 0 0 No -19 0.6 No 51 45.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135977437 - NM_006266 RALGDS 1 0.15 0.1 7 5.29 79.54 24 5.48 No 19 0.5 No 0 0 No -23 0.74 Yes 47 53.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 135977440 - NM_006266 RALGDS 1 0.46 0.38 17 0.8 72.93 21 5.2 No 16 0.51 No 0 0 No -20 0.55 No 50 49.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135980006 - NM_006266 RALGDS 1 0.23 0.18 13 2.71 78.28 15 4.26 No 34 0.62 No 30 0.61 Yes -28 0.3 No 15 77.8 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 135980032 - NM_006266 RALGDS 1 1.57 1.03 35 4.23 80.64 21 5.57 Yes 8 0.63 No 30 0.61 Yes -29 0.6 No 41 82.63 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 135980035 - NM_006266 RALGDS 1 1.62 1.15 41 6.26 83.82 18 5.3 No 5 0.66 No 0 0 No -26 0.71 Yes 44 86.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 135980172 - NM_006266 RALGDS 1 1.4 0.94 43 6.95 89.36 14 5.19 No 16 -1.24 No 0 0 No -28 0.6 No 42 62.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135981382 - NM_006266 RALGDS 1 0.19 0.14 10 6.39 81.52 14 4.98 No 64 2.31 Yes 0 0 No -26 0.91 Yes 44 88.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135982842 - NM_006266 RALGDS 1 0.36 0.24 13 8.25 85.81 28 5.83 Yes 53 0.51 No 0 0 No -17 0.31 No 43 53.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135984169 - NM_006266 RALGDS 1 1.05 1.08 41 5.32 75.5 30 5.35 No 17 -0.21 No 0 0 No -29 0.81 Yes 41 80 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 135984379 - NM_006266 RALGDS 1 0.75 0.67 32 7 81.08 27 5.48 No 14 1.86 Yes 0 0 No -26 0.93 Yes 44 94.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135985073 - NM_006266 RALGDS 1 65.32 38.72 72 5.41 71.26 15 4.22 No 10 1.34 Yes 22 0.89 Yes -22 0.89 Yes 48 87.54 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 135985112 - NM_006266 RALGDS 1 2.1 1.18 49 -10.56 0 18 4.36 No 5 0.2 No 20 0.91 Yes -17 0.62 No 53 42.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 129738171 + NM_001190730 RALGPS1 1 2.19 0.14 8 7.64 79.49 29 6.78 Yes 16 0.54 No 0 0 No -28 0.81 Yes 42 92.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 129738849 + NM_001190730 RALGPS1 1 2.99 0.24 17 9.47 81.53 30 5.14 No 0 0.12 No 0 0 No -25 0.54 No 45 79.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 129752171 + NM_001190730 RALGPS1 1 8.45 0.63 28 8.23 91.5 35 6.16 Yes 68 0.79 Yes 34 0.4 Yes -34 0.78 Yes 36 86.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 129778938 + NM_001190730 RALGPS1 1 10.34 0.78 32 9 91.27 24 3.96 No 11 0.71 No 23 0.76 Yes -23 0.73 Yes 47 76.73 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 178710622 + NM_001286247 RALGPS2 1 0.85 0.18 13 8.86 83.82 25 5.8 Yes 71 1.51 Yes 0 0 No -35 0.73 Yes 35 80.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 178765756 + NM_001286247 RALGPS2 1 0.41 0.17 9 12.67 88.37 43 4.76 No 42 1.14 Yes 0 0 No -28 0.85 Yes 42 85.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 178778024 + NM_001286247 RALGPS2 1 1.32 0.96 40 9.78 87.44 18 6.57 Yes 5 0.66 No 0 0 No -22 0.32 No 48 30.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 178779683 + NM_001286247 RALGPS2 1 0.13 0.13 7 10.63 92.63 25 5.58 Yes 12 1.28 Yes 0 0 No -27 0.38 No 46 61.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 178782088 + NM_001286247 RALGPS2 1 0.28 0.21 14 3.51 88.76 31 5.34 No 18 0.61 No 0 0 No -29 0.32 No 41 59.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 178855159 + NM_001286247 RALGPS2 1 0.49 0.19 12 7.93 84.64 25 4.51 No 65 0.48 No 0 0 No -25 0.67 Yes 45 50.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 178861364 + NM_001286247 RALGPS2 1 20.8 7.88 71 4.24 71.88 31 5.75 Yes 66 -5.38 No 30 0.56 Yes -26 0.33 No 40 59.56 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 32664974 + NM_016732 RALY 1 0.19 0.51 28 -2.47 0 24 4.75 No NA NA NA 0 0 No -21 0.27 No 14 28.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 32665175 + NM_016732 RALY 1 0.05 0.24 15 10.93 92.06 25 7.09 Yes 12 0.99 Yes 0 0 No -24 0.57 No 46 80.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 32666318 + NM_016732 RALY 1 0.05 0.21 13 -4.21 0 11 3.5 No 12 1.3 Yes 0 0 No -40 0.79 Yes 30 90.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 32668989 + NM_016732 RALY 1 0.17 0.78 36 8.45 77.15 25 6.92 Yes 12 0.94 Yes 0 0 No -32 0.6 No 45 63.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 131357350 + NM_006325 RAN 1 0.01 0.18 12 -6.05 0 11 4 No 49 -5.16 No 25 0.85 Yes -17 0.57 No 53 38.79 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 131358578 + NM_006325 RAN 1 0.01 0.35 19 8.51 86.62 21 5.61 Yes 12 1.52 Yes 24 0.92 Yes -24 0.61 No 46 75.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 131359095 + NM_006325 RAN 1 0.01 0.28 18 0.09 0 28 6.5 Yes 15 0.77 No 22 0.92 Yes -27 0.77 Yes 43 90.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 131360218 + NM_006325 RAN 1 0.01 0.29 16 8.82 78.67 26 5.39 No 72 0.64 No 0 0 No -25 0.62 No 45 56.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 131360435 + NM_006325 RAN 1 0 0.11 8 -3.01 0 12 4.24 No 21 1.81 Yes 0 0 No -33 0.9 Yes 37 93.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20108753 + NM_001278639 RANBP1 1 0.01 0.17 9 -1.17 80.38 18 4.58 No 35 1.69 Yes 0 0 No -42 0.6 No 28 70.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 20108792 + NM_001278639 RANBP1 1 0.03 0.36 19 4.47 83.95 35 6.4 Yes 74 1.71 Yes 0 0 No -34 0.72 Yes 36 81.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20110102 + NM_001278639 RANBP1 1 0.1 1.26 43 2.35 80.03 23 4.7 No 51 -2.16 No 22 0.81 Yes -22 0.55 No 50 26.77 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 20113800 + NM_001278639 RANBP1 1 0.04 0.36 14 0.55 0 12 4 No 38 0.7 No 27 0.91 Yes -29 0.31 No 59 52.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 20114477 + NM_001278639 RANBP1 1 74.52 404.9 72 6.6 91.84 26 6.6 Yes 13 1.22 Yes 22 0.97 Yes -25 0.98 Yes 45 97.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 20114483 + NM_001278639 RANBP1 1 0.02 0.11 7 -9.01 0 12 3.87 No 19 1.21 Yes 0 0 No -31 0.96 Yes 39 97.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67762505 - NM_001320240 RANBP10 1 9.72 4.1 70 5.75 78.35 44 7.07 Yes 31 1.28 Yes 31 0.64 Yes -31 0.86 Yes 39 73.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 67762580 - NM_001320240 RANBP10 1 0.47 0.18 12 -4.68 0 20 4.58 No 55 -4.19 No 0 0 No -19 0.92 Yes 51 75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 67763382 - NM_001320240 RANBP10 1 0.51 0.25 17 -3.24 0 9 3.87 No 14 1.97 Yes 0 0 No -26 0.8 Yes 44 88.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67764642 - NM_001320240 RANBP10 1 0.35 0.14 7 8.25 87.33 43 6.86 Yes 52 0.67 No 0 0 No -23 0.58 No 47 62.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67768260 - NM_001320240 RANBP10 1 0.69 0.28 14 4.96 80.76 30 4.9 No 17 0.95 Yes 0 0 No -25 0.67 Yes 45 76.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 67768479 - NM_001320240 RANBP10 1 0.32 0.13 7 10.76 94.72 28 5.29 No 64 0.72 No 0 0 No -27 0.65 No 47 58.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 67769658 - NM_001320240 RANBP10 1 0.74 0.43 22 4.57 0 39 9.21 Yes 56 0.46 No 38 0.14 Yes -38 0.58 No 32 75.91 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 67820229 - NM_001320240 RANBP10 1 0.34 0.18 11 10.69 94.25 50 7 Yes 37 1.78 Yes 0 0 No -30 0.9 Yes 40 83.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 109345590 + NM_006267 RANBP2 1 8.21 5.86 71 2.3 80.82 27 5.8 Yes 2 0.37 No 0 0 No -22 0.42 No 48 58.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 109346192 + NM_006267 RANBP2 1 0.1 0.13 9 11.93 92.63 24 5.48 No 57 1.07 Yes 0 0 No -23 0.76 Yes 47 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 109355530 + NM_006267 RANBP2 1 0.1 0.14 8 10.02 86.71 19 4.76 No 6 0.99 Yes 0 0 No -24 0.57 No 52 62.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 109365520 + NM_006267 RANBP2 1 0.56 0.78 39 4.92 83.39 28 4.62 No 37 0.75 No 0 0 No -22 0.51 No 48 75.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 109368051 + NM_006267 RANBP2 1 0.13 0.14 9 5.21 80.14 27 5.35 No 62 0.03 No 0 0 No -26 0.7 Yes 44 59.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 109374869 + NM_006267 RANBP2 1 0.04 0.11 8 -12.76 0 40 5.82 Yes 9 0.34 No 0 0 No -32 0.46 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 109385715 + NM_006267 RANBP2 1 0.86 1.92 60 9.67 91.36 28 6.01 Yes 36 0.3 No 0 0 No -27 0.76 Yes 43 63.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 109388950 + NM_006267 RANBP2 1 0.05 0.11 8 -4.52 0 9 3.25 No 27 0.44 No 0 0 No -39 0.82 Yes 31 83.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 109389618 + NM_006267 RANBP2 1 0.11 0.21 13 5.39 90.92 28 5.25 No 47 0.6 No 0 0 No -27 0.7 Yes 43 72.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 109390286 + NM_006267 RANBP2 1 0.14 0.35 21 5.52 83.82 19 5.48 No 6 1.12 Yes 0 0 No -18 0.72 Yes 52 87.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 109392163 + NM_006267 RANBP2 1 0.98 2.6 66 -6.32 0 12 3.29 No 47 0.56 No 28 0.38 Yes -37 0.44 No 33 39.67 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 109392225 + NM_006267 RANBP2 1 0.05 0.13 8 -3.02 0 18 4.58 No 41 1.17 Yes 0 0 No -17 0.73 Yes 53 42.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 109398587 + NM_006267 RANBP2 1 0.13 0.29 17 -2.86 0 31 5.74 Yes 6 0.1 No 0 0 No -30 0.9 Yes 40 95.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 5921327 - NM_001300865 RANBP3 1 0.47 0.64 28 0.53 0 9 3.87 No 16 0.95 Yes 0 0 No -28 0.97 Yes 42 96.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5924912 - NM_001300865 RANBP3 1 0.12 0.21 14 3.84 0 26 9.3 Yes 26 1.27 Yes 0 0 No -25 0.97 Yes 45 97.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5933668 - NM_001300865 RANBP3 1 0.09 0.15 11 11.83 88.64 37 6.61 Yes 66 2.17 Yes 23 0.48 Yes -27 0.64 No 34 78.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 5951608 - NM_001300865 RANBP3 1 23.71 29 72 8.92 91.17 34 4.53 No 63 2.43 Yes 27 0.57 Yes -33 0.74 Yes 37 67.97 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 5951608 - NM_001300865 RANBP3 1 0.89 1.06 44 8.92 91.17 34 4.53 No 63 2.43 Yes 27 0.57 Yes -33 0.74 Yes 37 67.97 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 5957947 - NM_001300865 RANBP3 1 0.35 0.32 20 10.1 92.51 28 6.48 Yes 42 1.09 Yes 27 0.34 Yes -21 0.55 No 43 82.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 5957980 - NM_001300865 RANBP3 1 0.46 0.42 21 -1.6 0 22 7.07 Yes 9 1.1 Yes 26 0.28 Yes -21 0.61 No 49 70.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 5974443 - NM_001300865 RANBP3 1 0.59 0.57 31 9.81 82.51 21 4.99 No 1 1.14 Yes 20 0.81 Yes -20 0.92 Yes 50 94.72 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 5976586 - NM_001300865 RANBP3 1 0.11 0.11 8 2.62 0 22 5.74 Yes 9 1.03 Yes 25 0.56 Yes -21 0.66 Yes 49 86.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 5976591 - NM_001300865 RANBP3 1 0.16 0.17 9 5.58 85.02 17 5.29 No 4 1.07 Yes 25 0.56 Yes -25 0.42 No 45 65.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 13632751 - NM_005493 RANBP9 1 2.3 3.68 71 -0.53 77.64 29 6.09 Yes 16 0.48 No 0 0 No -29 0.56 No 41 43.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 13655906 - NM_005493 RANBP9 1 0.18 0.26 18 5.2 86.37 25 9.31 Yes 65 1.47 Yes 0 0 No -24 0.74 Yes 46 81.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 13699925 - NM_005493 RANBP9 1 0.14 0.17 11 1.3 0 22 5.83 Yes 9 1.18 Yes 0 0 No -21 0.82 Yes 49 87.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 13699930 - NM_005493 RANBP9 1 0.17 0.17 10 4.87 85.02 17 5.39 No 4 1.21 Yes 0 0 No -29 0.36 No 43 59.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41645761 - NM_001278651 RANGAP1 1 0.08 0.21 13 6.64 88.36 54 6.95 Yes 41 1.6 Yes 0 0 No -23 0.89 Yes 47 73.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41645933 - NM_001278651 RANGAP1 1 0.07 0.18 11 5.76 85.9 68 9.21 Yes 55 2.26 Yes 0 0 No -51 0.43 No 51 64.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41650671 - NM_001278651 RANGAP1 1 0.29 0.49 28 10.23 89.17 24 4.76 No 73 0.67 No 0 0 No -18 0.67 Yes 47 63.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 41652113 - NM_001278651 RANGAP1 1 0.31 0.81 37 0.97 72.38 23 7.28 Yes 10 2.13 Yes 25 0.96 Yes -22 0.89 Yes 48 95.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 41673956 - NM_001278651 RANGAP1 1 0.06 0.14 9 1.29 71.31 26 6.16 Yes 40 1.09 Yes 0 0 No -25 0.86 Yes 45 75.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41676373 - NM_001278651 RANGAP1 1 0.43 0.82 39 5.55 77.78 14 5.69 Yes 1 0.37 No 0 0 No -28 0.76 Yes 42 68.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 41678828 - NM_001278651 RANGAP1 1 2.63 0.26 12 1.57 0 20 3.46 No 54 1.81 Yes 0 0 No -41 0.74 Yes 29 76.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 112237966 + NM_001291896 RAP1A 1 0.3 2.08 58 5.79 0 38 5.38 No 17 0.85 Yes 0 0 No -37 0.42 No 41 62.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 112242108 + NM_001291896 RAP1A 1 0.5 4.36 68 9.91 92.91 32 8.7 Yes 43 2.07 Yes 0 0 No -31 0.93 Yes 39 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 112243636 + NM_001291896 RAP1A 1 0.04 0.4 24 9.54 85.48 33 7.92 Yes 20 1.74 Yes 0 0 No -32 0.83 Yes 38 91.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 112245941 + NM_001291896 RAP1A 1 0.03 0.25 16 -0.65 0 28 5.04 No 56 0.47 No 26 0.66 Yes -10 0.56 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 112246030 + NM_001291896 RAP1A 1 0.01 0.14 7 6.05 84.92 18 4.9 No 70 -5.39 No 0 0 No -20 0.66 No 50 83.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 112249284 + NM_001291896 RAP1A 1 0.3 2.69 65 11.39 83.17 28 5.83 Yes 15 0.01 No 27 0.77 Yes -27 0.84 Yes 43 80.49 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 112251772 + NM_001291896 RAP1A 1 0.09 0.86 41 -7.92 0 30 6 Yes 62 0.61 No 0 0 No -29 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 112255059 + NM_001291896 RAP1A 1 0.13 1.11 47 1.36 0 17 3.68 No 32 0.44 No 0 0 No -44 0.58 No 26 69.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 99214555 + NM_001100429 RAP1GDS1 1 55.7 16.04 72 6.26 83.21 20 5.74 Yes 60 1.79 Yes 27 0.7 Yes -27 0.81 Yes 43 73.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 99218068 + NM_001100429 RAP1GDS1 1 1.07 0.86 35 5.46 83.56 48 6.66 Yes 35 0.97 Yes 33 0.57 Yes -33 0.4 No 37 67.98 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 99264266 + NM_001100429 RAP1GDS1 1 0.13 0.13 8 0.22 75.14 17 4.68 No 73 0.91 Yes 30 0.82 Yes -20 0.74 Yes 50 60.44 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 99300167 + NM_001100429 RAP1GDS1 1 17.12 0.74 38 11.49 94.39 17 5.99 Yes 4 1.06 Yes 21 0.45 Yes -21 0.64 No 49 49.11 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 99287407 + NM_001100429 RAP1GDS1 1 4.21 0.11 7 1.57 70.02 15 4.42 No 2 0.2 No 0 0 No -24 0.96 Yes 46 89.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 99300167 + NM_001100429 RAP1GDS1 1 1158.73 52.24 72 11.49 94.39 17 5.99 Yes 4 1.06 Yes 21 0.45 Yes -21 0.64 No 49 49.11 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 99330013 + NM_001100429 RAP1GDS1 1 0.33 0.19 12 4.81 72.42 31 3.75 No 11 0.6 No 0 0 No -30 0.7 Yes 40 67.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 99342408 + NM_001100429 RAP1GDS1 1 11.55 7.65 72 6.21 87.46 36 6.46 Yes 37 1.13 Yes 28 0.88 Yes -31 0.87 Yes 39 83.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 99357967 + NM_001100429 RAP1GDS1 1 0.23 0.14 8 8.4 91.08 57 5.21 No 37 1.37 Yes 0 0 No -21 0.63 No 49 50.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 99362472 + NM_001100429 RAP1GDS1 1 0.7 0.54 32 2.74 74.35 32 6 Yes 19 1.39 Yes 0 0 No -31 0.87 Yes 39 94.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 98087702 + NM_021033 RAP2A 1 0.53 0.82 38 6.71 80.48 35 6.83 Yes 22 1.58 Yes 0 0 No -34 0.69 Yes 36 83.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 98094021 + NM_021033 RAP2A 1 0.5 0.71 33 7.98 95.71 101 8 Yes 22 1.3 Yes 34 0.79 Yes -34 0.81 Yes 36 75.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 131341513 - NM_001271187 RAP2C 1 0.13 0.26 15 9.19 93.36 35 6.07 Yes 22 1.68 Yes 0 0 No -34 0.45 No 47 57.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 131347984 - NM_001271187 RAP2C 1 0.49 1.01 45 5.57 90.02 23 5.02 No 46 0.88 Yes 0 0 No -26 0.84 Yes 44 74.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 131351170 - NM_001271187 RAP2C 1 7.6 1.11 44 -1.98 75.82 19 4.9 No 18 1.02 Yes 0 0 No -25 0.51 No 48 37.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 131351231 - NM_001271187 RAP2C 1 1.22 0.15 9 7.21 83.26 21 6.16 Yes -3 0.36 No 0 0 No -21 0.54 No 49 53.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 134455801 - NM_198679 RAPGEF1 1 0.11 0.21 12 -10.37 0 16 3.72 No 36 1.79 Yes 26 0.9 Yes -36 0.77 Yes 22 34.88 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 134457694 - NM_198679 RAPGEF1 1 0.09 0.17 10 8.57 81.84 15 5.68 Yes 2 0.92 Yes 0 0 No -26 0.66 No 44 60.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 134469358 - NM_198679 RAPGEF1 1 0.17 0.56 28 1.25 68.53 23 5.29 No 47 0.91 Yes 0 0 No -22 0.62 No 48 53.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 134470294 - NM_198679 RAPGEF1 1 0.26 0.76 30 10.48 89.54 20 5.13 No 50 1.06 Yes 0 0 No -25 0.74 Yes 45 71.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134473931 - NM_198679 RAPGEF1 1 0.42 0.78 39 6.52 91.63 24 5.41 No 33 0.74 No 0 0 No -24 0.63 No 46 63.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 134477534 - NM_198679 RAPGEF1 1 0.16 0.26 13 -10.57 73.12 25 5.47 No 12 0.79 Yes 0 0 No -24 0.95 Yes 46 91.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134479441 - NM_198679 RAPGEF1 1 0.48 0.83 40 11.13 84.59 33 7.14 Yes 44 -0.7 No 32 0.56 Yes -32 0.79 Yes 38 80.89 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 134480576 - NM_198679 RAPGEF1 1 0.36 0.61 32 4.3 72.14 64 9.16 Yes 51 1.69 Yes 38 0.14 Yes -60 0.54 No 32 52.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 134494594 - NM_198679 RAPGEF1 1 0.57 0.96 41 7.31 87.81 61 10.05 Yes 48 2.62 Yes 0 0 No -60 0.91 Yes 10 75.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134494597 - NM_198679 RAPGEF1 1 0.52 0.92 41 8.03 82.76 58 9.9 Yes 45 2.62 Yes 26 0.2 Yes -57 0.91 Yes 13 91.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 134496842 - NM_198679 RAPGEF1 1 0.96 1.68 54 5.43 68.83 45 7 Yes 32 2.21 Yes 0 0 No -44 0.77 Yes 26 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134502594 - NM_198679 RAPGEF1 1 0.13 0.33 20 3.37 0 45 7.49 Yes 32 1.37 Yes 0 0 No -44 0.87 Yes 26 92.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134503840 - NM_198679 RAPGEF1 1 0.11 0.24 12 0.98 84.28 22 5.1 No 31 -2.53 No 0 0 No -21 0.77 Yes 49 78.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 134504219 - NM_198679 RAPGEF1 1 0.17 0.42 19 7.92 92.83 16 6.48 Yes 45 0.09 No 0 0 No -37 0.42 No 33 24.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 134510480 - NM_198679 RAPGEF1 1 0.08 0.17 9 9.3 92.48 19 4.25 No 22 1.55 Yes 0 0 No -24 0.91 Yes 46 92.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134514174 - NM_198679 RAPGEF1 1 0.04 0.15 11 0.72 0 49 6.91 Yes 36 0.77 Yes 0 0 No -41 0.77 Yes 29 88.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134521699 - NM_198679 RAPGEF1 1 0.4 0.71 31 11.79 93.5 34 7.19 Yes 21 1.86 Yes 0 0 No -33 0.88 Yes 37 92.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134525627 - NM_198679 RAPGEF1 1 0.27 0.4 20 -8.8 79.61 22 5.29 No 67 1.43 Yes 0 0 No -26 0.59 No 44 66.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 134525646 - NM_198679 RAPGEF1 1 0.17 0.26 17 -3.96 0 15 4.12 No 48 1.43 Yes 23 0.73 Yes -32 0.43 No 38 36.26 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 134525654 - NM_198679 RAPGEF1 1 0.69 1.08 42 5.57 79.17 25 5.19 No 40 1.43 Yes 23 0.73 Yes -24 0.49 No 46 38.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 134525672 - NM_198679 RAPGEF1 1 0.21 0.32 17 5.61 71.61 35 6.98 Yes 22 1.46 Yes 23 0.73 Yes -34 0.81 Yes 36 78.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 160253079 + NM_014247 RAPGEF2 1 0.12 0.11 7 -8.81 0 28 5.84 Yes 15 0.51 No 0 0 No -27 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 160260659 + NM_014247 RAPGEF2 1 0.13 0.17 11 4.73 76.59 39 6.46 Yes 42 0.53 No 0 0 No -38 0.69 Yes 32 65.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 160271336 + NM_014247 RAPGEF2 1 0.16 0.14 9 4.9 82.78 26 6.18 Yes 40 -2.12 No 25 0.84 Yes -26 0.75 Yes 44 87.35 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 160272210 + NM_014247 RAPGEF2 1 137.46 47.18 72 8.83 77.55 26 6.01 Yes 1 1.08 Yes 25 0.88 Yes -25 0.6 No 40 71.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr7 22243537 - NM_012294 RAPGEF5 1 0.71 0.13 7 10.02 92.45 48 7.25 Yes 26 0.37 No 0 0 No -32 0.62 No 38 71.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 22282539 - NM_012294 RAPGEF5 1 1.87 0.33 22 7.21 83.55 28 4.14 No 67 1.71 Yes 0 0 No -27 0.55 No 10 14.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 22350220 - NM_012294 RAPGEF5 1 1.82 0.56 27 7.31 84.43 50 7.99 Yes 37 1.43 Yes 0 0 No -27 0.91 Yes 43 92.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 22352695 - NM_012294 RAPGEF5 1 0.45 0.11 7 4.56 78.35 32 6.46 Yes 19 1.09 Yes 0 0 No -31 0.7 Yes 39 87.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 22354254 - NM_012294 RAPGEF5 1 0.79 0.21 12 3.97 77.69 18 6.67 Yes 5 0.01 No 0 0 No -29 0.59 No 40 58.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 22354349 - NM_012294 RAPGEF5 1 7.11 2.17 58 6.88 93.46 26 4.78 No 13 0.38 No 0 0 No -25 0.39 No 45 46.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 22354365 - NM_012294 RAPGEF5 1 0.49 0.15 9 -5.89 0 16 4.46 No 47 0.26 No 0 0 No -59 0.31 No 11 37.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 130769238 - NM_001164387 RAPGEF6 1 0.56 0.4 20 6.49 82.95 16 4.76 No 3 1.55 Yes 0 0 No -28 0.63 No 39 84.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 130772075 - NM_001164387 RAPGEF6 1 0.72 0.57 27 11.02 86.1 26 5.56 Yes 21 1.02 Yes 0 0 No -25 0.69 Yes 45 63.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 130775922 - NM_001164387 RAPGEF6 1 1.54 0.99 43 8.85 79.91 32 6.61 Yes 22 0.91 Yes 0 0 No -34 0.85 Yes 36 94.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130834684 - NM_001164387 RAPGEF6 1 0.2 0.14 9 10.85 83.35 29 7.87 Yes 16 0.91 Yes 0 0 No -28 0.92 Yes 42 93.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130883880 - NM_001164387 RAPGEF6 1 0.42 0.17 9 -0.27 0 19 4.22 No 25 0.19 No 0 0 No -30 0.92 Yes 40 84.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 130896476 - NM_001164387 RAPGEF6 1 0.23 0.13 8 0.34 62.76 18 3.25 No 15 1.24 Yes 0 0 No -37 0.54 No 33 71.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 130899560 - NM_001164387 RAPGEF6 1 0.65 0.26 18 6.03 72.45 28 5.66 Yes 58 0.92 Yes 0 0 No -27 0.77 Yes 43 72.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 130899641 - NM_001164387 RAPGEF6 1 0.6 0.22 13 13.55 95.73 49 5.74 Yes 69 0.48 No 0 0 No -35 0.73 Yes 35 67.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 130906148 - NM_001164387 RAPGEF6 1 1.84 0.75 33 8.59 84.53 43 4.99 No 3 0.59 No 0 0 No -31 0.48 No 39 66.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 130955867 - NM_001164387 RAPGEF6 1 1.19 0.36 20 5.33 71.04 26 6.47 Yes 43 -3.55 No 0 0 No -25 0.75 Yes 45 65.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 130960028 - NM_001164387 RAPGEF6 1 2.82 0.96 42 7.38 74.6 37 7.63 Yes 24 1.51 Yes 0 0 No -30 0.57 No 34 77.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 38346690 + NM_001303533 RAPGEFL1 1 7.28 0.18 11 -2.73 0 26 5.39 No 56 -2.85 No 0 0 No -25 0.84 Yes 45 71.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 38496064 + NM_000964 RARA 1 0.73 0.64 30 1.68 85.71 23 4.8 No 33 0.98 Yes 0 0 No -22 0.83 Yes 48 91.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38506052 + NM_000964 RARA 1 0.91 0.94 35 5.38 85.64 26 3.78 No 27 1.85 Yes 0 0 No -23 0.48 No 47 58.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38510432 + NM_000964 RARA 1 0.23 0.32 20 -1.29 68.34 21 4.69 No 76 -3.87 No 0 0 No -20 0.87 Yes 50 90.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 38510436 + NM_000964 RARA 1 0.2 0.25 13 -3.3 0 25 5.1 No 72 -2.49 No 0 0 No -24 0.87 Yes 46 84.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 38510523 + NM_000964 RARA 1 0.21 0.26 15 1.12 69.12 20 4.9 No 7 -0.72 No 24 0.85 Yes -19 0.89 Yes 51 85.93 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 38510691 + NM_000964 RARA 1 0.69 0.88 34 6.5 77.46 31 8.05 Yes 18 1.85 Yes 0 0 No -30 0.9 Yes 40 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63312071 + NM_004585 RARRES3 1 0.47 0.15 10 8.35 82.57 37 6.18 Yes 3 0.78 Yes 36 0.48 Yes -36 0.83 Yes 34 65.32 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 167915157 + NM_002887 RARS 1 0.25 0.89 33 8.42 88.56 37 10.29 Yes 65 1.11 Yes 36 0.74 Yes -36 0.79 Yes 34 86.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 167915610 + NM_002887 RARS 1 0.07 0.22 14 -4.38 0 29 5.48 No 16 0.42 No 0 0 No -28 0.85 Yes 42 76.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 167920102 + NM_002887 RARS 1 0.02 0.11 7 7.03 85.5 21 5.55 No 76 0.93 Yes 0 0 No -30 0.78 Yes 40 76.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 167922295 + NM_002887 RARS 1 0.13 0.71 26 7.93 79.32 42 9.56 Yes 41 0.08 No 29 0.92 Yes -42 0.78 Yes 28 77.21 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 167922350 + NM_002887 RARS 1 0.02 0.1 7 7.37 72.42 22 5.72 Yes 9 1.14 Yes 0 0 No -59 0.37 No 44 51.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 167924951 + NM_002887 RARS 1 0.42 1.19 47 6.69 66.72 52 8.71 Yes 39 0.72 No 29 0.82 Yes -51 0.54 No 19 72.88 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 167929047 + NM_002887 RARS 1 0.03 0.13 8 4.32 78.35 34 4.9 No 68 0.54 No 0 0 No -20 0.54 No 50 62.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 167936686 + NM_002887 RARS 1 0.07 0.22 13 10.35 89.4 47 7.28 Yes 34 1.54 Yes 0 0 No -46 0.74 Yes 24 86.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88225641 - NM_001318785 RARS2 1 0.19 0.24 14 6.27 87.63 27 5.74 Yes 72 -1.34 No 0 0 No -58 0.71 Yes 12 80 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88225665 - NM_001318785 RARS2 1 0.36 0.49 28 4.8 83.28 37 5.23 No 59 -2.76 No 34 0.5 Yes -34 0.91 Yes 36 92.68 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 88227871 - NM_001318785 RARS2 1 0.76 0.86 42 4.6 86.49 19 4.69 No -1 0.67 No 0 0 No -18 0.67 Yes 52 72.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88228401 - NM_001318785 RARS2 1 0.12 0.11 7 5.34 85.26 22 5.29 No 67 0.24 No 0 0 No -21 0.86 Yes 49 79.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88229971 - NM_001318785 RARS2 1 3.16 2.81 64 3.64 0 48 6.84 Yes 35 0.36 No 0 0 No -40 0.5 No 30 47.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 88231241 - NM_001318785 RARS2 1 0.1 0.15 9 -4.52 78.14 32 6.47 Yes 19 1.49 Yes 0 0 No -31 0.72 Yes 39 83.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88234393 - NM_001318785 RARS2 1 1.13 1.5 50 6.21 87.53 21 4.73 No 39 1.72 Yes 24 0.86 Yes -28 0.61 No 42 66.87 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 88244577 - NM_001318785 RARS2 1 1.72 2.15 62 10.51 86.44 28 5.32 No 55 0.1 No 0 0 No -27 0.76 Yes 44 69.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88244577 - NM_001318785 RARS2 1 0.1 0.13 8 10.51 86.44 28 5.32 No 55 0.1 No 0 0 No -27 0.76 Yes 44 69.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88265220 - NM_001318785 RARS2 1 0.41 0.5 31 1.42 0 28 4.63 No 29 0.71 No 0 0 No -23 0.39 No 47 63.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 88265239 - NM_001318785 RARS2 1 1.58 1.92 63 6.11 78.73 38 5.7 Yes 10 0.73 No 19 0.59 Yes -33 0.53 No 37 50.72 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 88274381 - NM_001318785 RARS2 1 0.47 0.51 25 0.73 0 50 8.03 Yes 52 1.66 Yes 29 0.63 Yes -33 0.46 No 37 70.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 88293305 - NM_001318785 RARS2 1 1.17 0.21 12 3.84 84.41 34 5.05 No 51 0.99 Yes 0 0 No -28 0.92 Yes 42 95.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88294982 - NM_001318785 RARS2 1 1.45 0.31 17 6.27 88.45 17 5.86 Yes 4 1.17 Yes 0 0 No -20 0.92 Yes 50 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 86640347 + NM_022650 RASA1 1 0.63 0.58 27 9.64 85.1 25 6.01 Yes 12 0.94 Yes 0 0 No -27 0.59 No 43 87.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 86645002 + NM_022650 RASA1 1 0.28 0.35 19 5.76 74.48 30 7.5 Yes 17 0.89 Yes 18 0.92 Yes -30 0.26 No 40 59.87 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 86645016 + NM_022650 RASA1 1 0.27 0.35 19 -4.62 55.97 20 4.11 No 31 0.87 Yes 18 0.92 Yes -44 0.23 No 26 54.91 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 86661792 + NM_022650 RASA1 1 1.17 0.93 44 6.92 78.78 19 5 No 15 0.1 No 0 0 No -18 0.67 Yes 43 71.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 86662167 + NM_022650 RASA1 1 0.2 0.17 10 2.2 77.31 20 4.69 No 72 -3.84 No 19 0.69 Yes -19 0.85 Yes 51 60.09 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 86665694 + NM_022650 RASA1 1 0.35 0.29 19 9.73 97.85 28 5.43 No 74 0.69 No 0 0 No -27 0.62 No 43 66.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 86667916 + NM_022650 RASA1 1 0.42 0.43 26 2.55 79.91 24 5.1 No 48 -3.16 No 21 0.61 Yes -23 0.38 No 51 56.26 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 86670068 + NM_022650 RASA1 1 0.11 0.18 9 5 65.96 29 6.6 Yes 4 1.14 Yes 0 0 No -28 0.85 Yes 42 83.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 86675624 + NM_022650 RASA1 1 0.18 0.25 15 4.53 73.19 31 6.86 Yes 63 -5.97 No 0 0 No -25 0.77 Yes 45 70.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 86676356 + NM_022650 RASA1 1 0.59 0.79 35 6.46 77.12 25 5.51 No 59 0.58 No 0 0 No -24 0.89 Yes 46 81.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 86683045 + NM_022650 RASA1 1 0.9 1.29 51 7.98 77.93 30 6.6 Yes 17 1.36 Yes 0 0 No -29 0.83 Yes 41 85.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 141220790 + NM_006506 RASA2 1 0.48 0.13 9 7.9 81.69 22 5.2 No 9 0.93 Yes 0 0 No -21 0.52 No 49 63.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 141228409 + NM_006506 RASA2 1 2.63 0.65 28 9.7 91.99 24 6.98 Yes 11 1.01 Yes 0 0 No -23 0.88 Yes 47 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 141274647 + NM_006506 RASA2 1 1.41 0.61 30 3.03 68.7 17 5.72 Yes 63 1.28 Yes 28 0.6 Yes -26 0.74 Yes 44 83.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 141297490 + NM_006506 RASA2 1 0.28 0.13 7 8.72 94.44 20 5.1 No 42 -2.04 No 0 0 No -19 0.4 No 51 56.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 141327372 + NM_006506 RASA2 1 0.53 0.24 14 2.84 85.97 14 5.2 No 56 1.93 Yes 0 0 No -26 0.86 Yes 44 60.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 141329523 + NM_006506 RASA2 1 0.68 0.17 12 5.05 82.15 31 4.25 No 53 -2.07 No 0 0 No -30 0.54 No 40 75.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 114756835 - NM_001320822 RASA3 1 0.75 0.14 8 3.76 77.42 37 6.55 Yes -1 0.3 No 0 0 No -34 0.59 No 36 70.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 114762207 - NM_001320822 RASA3 1 0.4 0.13 8 3.37 0 12 4.24 No 16 1.2 Yes 0 0 No -28 0.79 Yes 42 84.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114766456 - NM_001320822 RASA3 1 0.66 0.21 13 8.38 91.86 11 6.08 Yes 55 0.02 No 0 0 No -34 0.37 No 45 51.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 114782918 - NM_001320822 RASA3 1 1.13 0.35 21 5.86 76.97 24 6.23 Yes -3 1.52 Yes 0 0 No -23 0.85 Yes 47 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114822950 - NM_001320822 RASA3 1 3.72 0.93 39 5.6 81.7 25 5.69 Yes 12 0.92 Yes 0 0 No -24 0.49 No 46 72.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 15563053 - NM_022904 RASAL3 1 0.17 0.22 13 0.98 0 13 4.24 No 49 0.54 No 0 0 No -43 0.47 No 27 65.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 15563062 - NM_022904 RASAL3 1 0.99 1.24 48 4.12 72.15 53 6.51 Yes 40 0.55 No 0 0 No -34 0.45 No 36 79.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 15564236 - NM_022904 RASAL3 1 0.07 0.11 8 5.69 75.09 24 4.98 No -3 0.29 No 0 0 No -20 0.63 No 50 83.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 15565103 - NM_022904 RASAL3 1 0.17 0.25 16 -3.04 0 21 4.47 No 8 0.75 No 26 0.91 Yes -20 0.9 Yes 50 83.81 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 15565335 - NM_022904 RASAL3 1 0.19 0.25 11 3.25 63.86 32 5.64 Yes 58 -2.56 No 0 0 No -17 0.64 No 13 32.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 15565390 - NM_022904 RASAL3 1 0.16 0.24 14 0.96 74.7 16 5.57 Yes -2 1.06 Yes 22 0.85 Yes -15 0.61 No 55 58.57 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 15565743 - NM_022904 RASAL3 1 0.98 1.13 51 7.61 78.75 23 6.39 Yes 4 1.44 Yes 26 0.97 Yes -25 0.89 Yes 45 90.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 15565743 - NM_022904 RASAL3 1 0.34 0.43 21 7.61 78.75 23 6.39 Yes 4 1.44 Yes 26 0.97 Yes -25 0.89 Yes 45 90.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 15567055 - NM_022904 RASAL3 1 0.29 0.42 21 0.15 0 28 4.83 No 30 0.4 No 0 0 No -34 0.56 No 36 57.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 15567087 - NM_022904 RASAL3 1 0.14 0.22 13 3.13 70.18 11 5.57 Yes 39 -3.08 No 22 0.63 Yes -24 0.56 No 46 74.83 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 15572378 - NM_022904 RASAL3 1 0.19 0.1 7 7.48 80.16 10 4.9 No 59 -0.38 No 0 0 No -17 0.66 Yes 47 50.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 15572417 - NM_022904 RASAL3 1 0.16 0.11 7 -0.81 76.43 24 5.48 No 68 -2.93 No 0 0 No -23 0.51 No 38 65.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 15572438 - NM_022904 RASAL3 1 0.15 0.13 9 0.46 0 12 4.12 No 47 -3.43 No 30 0.41 Yes -31 0.4 No 59 36.66 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 38791523 - NM_001128602 RASGRP1 1 0.17 0.11 8 8.94 79.41 22 5.81 Yes 47 0.95 Yes 0 0 No -29 0.56 No 41 72.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 38793637 - NM_001128602 RASGRP1 1 0.17 0.14 10 -1.06 0 35 7.53 Yes 40 1.25 Yes 24 0.69 Yes -34 0.9 Yes 36 94 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 38793642 - NM_001128602 RASGRP1 1 0.27 0.19 12 4.76 73.63 30 7.23 Yes 35 1.27 Yes 24 0.69 Yes -29 0.92 Yes 41 94.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 38800165 - NM_001128602 RASGRP1 1 0.35 0.19 12 8.54 87.49 24 4.75 No 7 1.23 Yes 0 0 No -23 0.62 No 47 68.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 38822532 - NM_001128602 RASGRP1 1 0.26 0.17 11 6.35 79.4 19 5.5 No 6 1.09 Yes 0 0 No -27 0.93 Yes 43 91.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 33749501 + NM_015376 RASGRP3 1 0.94 2.69 66 -2.49 74.64 21 5.64 Yes 8 1.26 Yes 0 0 No -31 0.53 No 46 74.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 33752348 + NM_015376 RASGRP3 1 0.08 0.22 16 7.78 87.83 26 5.48 No 22 -1.35 No 0 0 No -25 0.75 Yes 47 66.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 33755929 + NM_015376 RASGRP3 1 0.12 0.32 13 11.92 95.55 35 7.46 Yes 66 -3.4 No 24 0.33 Yes -35 0.27 No 36 56.58 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 33756118 + NM_015376 RASGRP3 1 1.32 4.21 70 7.92 80.26 31 5.48 No 18 0.81 Yes 0 0 No -30 0.62 No 40 70.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 33764160 + NM_015376 RASGRP3 1 1.4 0.63 33 6.67 91.91 38 4.12 No 43 -1.64 No 31 0.27 Yes -31 0.44 No 45 52.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 33759616 + NM_015376 RASGRP3 1 1.27 0.56 29 5.41 87.93 36 7.6 Yes 23 1.49 Yes 0 0 No -35 0.8 Yes 35 89.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 33764160 + NM_015376 RASGRP3 1 678.19 312.06 72 6.67 91.91 38 4.12 No 43 -1.64 No 31 0.27 Yes -31 0.44 No 45 52.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 33765026 + NM_015376 RASGRP3 1 0.05 0.11 8 0.94 76.63 28 4.33 No 67 -4.98 No 22 0.75 Yes -22 0.56 No 48 57.96 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 33782431 + NM_015376 RASGRP3 1 0.21 0.69 32 2.9 74.95 35 5.88 Yes 22 0.82 Yes 0 0 No -34 0.62 No 36 86.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 33783014 + NM_015376 RASGRP3 1 0.05 0.18 13 7.43 86.48 33 5.66 Yes 20 1.19 Yes 0 0 No -25 0.91 Yes 45 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 33783743 + NM_015376 RASGRP3 1 0.71 1.54 48 4.39 0 30 6.44 Yes 56 1.9 Yes 0 0 No -26 0.8 Yes 44 76.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 33786700 + NM_015376 RASGRP3 1 0.46 1.32 47 9.18 98.64 23 4.55 No 54 -2.83 No 0 0 No -23 0.55 No 47 59.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 33787522 + NM_015376 RASGRP3 1 0.3 0.83 33 8.29 87.15 17 5.67 Yes 72 0.84 Yes 0 0 No -27 0.85 Yes 43 91.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50369192 - NM_170713 RASSF1 1 0.27 0.21 12 7.05 88.27 21 3.8 No 42 0.53 No 0 0 No -21 0.71 Yes 49 62.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 4768348 - NM_170774 RASSF2 1 0.2 0.33 17 5.9 82.46 19 5.92 Yes 6 0.29 No 26 0.78 Yes -18 0.46 No 44 42.91 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 4776609 - NM_170774 RASSF2 1 0.08 0.14 7 -8.28 0 30 6.15 Yes 8 1.27 Yes 0 0 No -29 0.88 Yes 41 83.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 4779809 - NM_170774 RASSF2 1 0.14 0.29 15 10.23 87.72 26 5.65 Yes 13 0.74 No 0 0 No -25 0.85 Yes 45 88.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 65079209 + NR_040718 RASSF3 1 13.42 0.58 31 6.53 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.63 No 51 84.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 65081995 + NR_040718 RASSF3 1 4129.69 234.39 72 9.33 85.94 27 5.74 Yes 72 1.11 Yes 26 0.91 Yes -26 0.86 Yes 44 92.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 45465616 + NM_032023 RASSF4 1 0.35 0.24 15 -2.13 0 37 9.49 Yes 24 1.99 Yes 32 0.92 Yes -36 0.94 Yes 34 96.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 45466091 + NM_032023 RASSF4 1 0.59 0.64 29 8.17 77.79 34 7.66 Yes 21 1.63 Yes 0 0 No -33 0.4 No 37 73.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 45478357 + NM_032023 RASSF4 1 0.57 0.13 9 1.59 67.15 35 7.21 Yes 22 1.71 Yes 34 0.65 Yes -34 0.66 No 36 76.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 45479317 + NM_032023 RASSF4 1 2.73 1.31 51 10.42 94.73 22 6 Yes 44 1.47 Yes 29 0.42 Yes -21 0.56 No 49 74.16 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 45479343 + NM_032023 RASSF4 1 3.24 1.61 51 5.03 78.4 23 5.92 Yes 10 2.01 Yes 0 0 No -22 0.75 Yes 48 75.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 45479388 + NM_032023 RASSF4 1 14.89 7.79 69 8.21 85.25 41 6.31 Yes 55 2.02 Yes 35 0.79 Yes -40 0.63 No 30 85.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 45479438 + NM_032023 RASSF4 1 3.38 1.76 56 8.94 85.1 23 5.39 No 10 1.3 Yes 24 0.8 Yes -22 0.82 Yes 48 91.35 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 45485082 + NM_032023 RASSF4 1 0.34 0.22 13 3.56 69.95 21 5.2 No 8 0.89 Yes 23 0.92 Yes -20 0.76 Yes 50 93.24 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 45485464 + NM_032023 RASSF4 1 1.89 1.64 44 5.58 96.9 17 4.75 No -2 0.56 No 0 0 No -20 0.76 Yes 50 58.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 206733457 + NM_182665 RASSF5 1 0.44 0.71 33 8.09 80.88 28 5.66 Yes 69 1.61 Yes 0 0 No -27 0.73 Yes 43 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 206746732 + NM_182665 RASSF5 1 0.11 0.18 9 10.1 94.33 16 6.14 Yes 3 1.39 Yes 0 0 No -21 0.47 No 49 53.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 206754189 + NM_182665 RASSF5 1 0.11 0.18 9 12.05 86.32 32 5.36 No 24 0.47 No 0 0 No -25 0.59 No 39 52.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 206757584 + NM_182665 RASSF5 1 0.13 0.31 19 10.91 84.96 14 5.57 Yes 41 0.58 No 0 0 No -32 0.37 No 50 33.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 206757881 + NM_182665 RASSF5 1 0.13 0.28 15 10.58 74.21 28 4.98 No 46 -2.48 No 0 0 No -20 0.43 No 48 40.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 206758392 + NM_182665 RASSF5 1 0.37 0.75 32 6.58 78 29 4.85 No 7 0.53 No 0 0 No -25 0.61 No 42 70.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 206758410 + NM_182665 RASSF5 1 0.28 0.56 27 6.23 83.68 23 5.03 No 25 0.54 No 0 0 No -22 0.7 Yes 48 55.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 206758482 + NM_182665 RASSF5 1 0.04 0.1 7 3.99 79.64 32 6.16 Yes NA NA NA 22 0.62 Yes -32 0.3 No 19 49.78 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 74442050 - NM_177532 RASSF6 1 3.88 2.96 58 4.85 71.82 30 7.49 Yes 27 -2.45 No 26 0.9 Yes -25 0.48 No 45 66.61 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 74448469 - NM_177532 RASSF6 1 0.14 0.15 9 6.35 87.65 26 4.83 No 28 0.72 No 0 0 No -25 0.91 Yes 45 81.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 74450551 - NM_177532 RASSF6 1 0.73 0.54 23 5.91 86.07 24 5 No 23 1.45 Yes 0 0 No -23 0.72 Yes 47 74.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 74451063 - NM_177532 RASSF6 1 1.11 1.08 39 4.73 87.45 22 4.16 No 22 0.67 No 0 0 No -24 0.56 No 40 34.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 74454348 - NM_177532 RASSF6 1 0.3 0.21 11 11.78 95.1 27 8.84 Yes 41 0 No 0 0 No -26 0.75 Yes 44 74.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 74456757 - NM_177532 RASSF6 1 0.92 0.64 31 2.63 71.26 47 8.61 Yes 34 1.17 Yes 0 0 No -30 0.55 No 40 58.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 74457830 - NM_177532 RASSF6 1 0.28 0.21 12 5.46 71.68 60 8.25 Yes 8 1.24 Yes 0 0 No -32 0.66 Yes 38 72.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 74470305 - NM_177532 RASSF6 1 7.39 5.81 64 9.58 88.33 27 5.48 No 14 0.75 No 26 0.9 Yes -26 0.91 Yes 44 93.72 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 74471674 - NM_177532 RASSF6 1 1.3 1.07 35 6.48 76.26 21 4.45 No 8 1.16 Yes 0 0 No -20 0.46 No 50 55.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 74478953 - NM_177532 RASSF6 1 0.27 0.19 10 1.29 0 11 4.12 No 48 1.46 Yes 0 0 No -31 0.68 Yes 39 87.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 74478961 - NM_177532 RASSF6 1 1.29 0.65 30 -10.25 65.21 28 4.93 No 40 1.46 Yes 0 0 No -23 0.62 No 47 82.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 10432292 - NM_133452 RAVER1 1 1.3 2.65 62 3.17 74.02 26 8.08 Yes NA NA NA 0 0 No -26 0.93 Yes 44 89.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10434828 - NM_133452 RAVER1 1 0.27 0.4 23 4.74 84.41 30 7.87 Yes 17 1.65 Yes 0 0 No -29 0.81 Yes 41 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10439729 - NM_133452 RAVER1 1 0.17 0.33 19 6.05 82.16 16 5.65 Yes 75 1.72 Yes 26 0.53 Yes -19 0.55 No 51 52.34 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 10443588 - NM_133452 RAVER1 1 0.2 0.49 22 6.46 84.53 29 7.42 Yes 16 1.01 Yes 0 0 No -28 0.48 No 39 69.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 48900578 + NM_000321 RB1 1 0.09 0.28 16 7.32 88.32 25 5 No 7 0.73 No 0 0 No -24 0.91 Yes 46 93.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 48907152 + NM_000321 RB1 1 0.65 1.9 59 9.45 79.03 27 5.29 No 14 0.06 No 0 0 No -26 0.72 Yes 44 59.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 48922570 + NM_000321 RB1 1 0.08 0.38 17 0.01 65.59 34 5.45 No 18 -2.63 No 0 0 No -25 0.38 No 41 58.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 48931071 + NM_000321 RB1 1 0.47 1.5 59 11 95.31 19 5.13 No 26 0.39 No 0 0 No -22 0.71 Yes 48 57.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 48936956 + NM_000321 RB1 1 0.09 0.39 19 -1.71 0 11 3.87 No 11 0.97 Yes 0 0 No -28 0.64 No 42 80.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 48942664 + NM_000321 RB1 1 0.04 0.14 8 -22.56 0 24 6.33 Yes 11 1.25 Yes 0 0 No -27 0.33 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 48954182 + NM_000321 RB1 1 0.09 0.26 16 -1.8 0 33 7.01 Yes 41 0.76 No 38 0.43 Yes -29 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 48981108 + NM_000321 RB1 1 0.33 1.15 41 6.13 75.75 33 5.69 Yes 8 0.86 Yes 0 0 No -36 0.43 No 34 43.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 48987120 + NM_000321 RB1 1 0.06 0.22 15 10.99 90.88 28 5.01 No 61 0.58 No 0 0 No -31 0.68 Yes 39 58.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 48988207 + NM_000321 RB1 1 0.17 0.54 27 6.85 80.8 25 5.26 No 2 0.78 Yes 0 0 No -25 0.85 Yes 45 83.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 48989857 + NM_000321 RB1 1 0.11 0.38 20 7.59 84.6 31 5.95 Yes 12 0.73 No 0 0 No -24 0.93 Yes 46 92.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 49001278 + NM_000321 RB1 1 0.1 0.38 20 5.83 76.95 34 5.99 Yes 21 1.53 Yes 0 0 No -33 0.87 Yes 37 85.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 49030357 + NM_000321 RB1 1 0.03 0.11 7 4.76 78.91 21 5.2 No 73 -2.29 No 0 0 No -24 0.79 Yes 46 78.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 49050880 + NM_000321 RB1 1 0.04 0.14 8 0.11 68.56 21 4.77 No 66 -5.63 No 0 0 No -20 0.46 No 50 42.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49054114 + NM_000321 RB1 1 0.12 0.56 26 4.65 72.05 28 5.48 No 59 -2.1 No 23 0.92 Yes -27 0.92 Yes 43 93.68 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 53536288 - NM_014781 RB1CC1 1 3.59 1.74 51 9.41 84.89 39 7.28 Yes 1 1.1 Yes 26 0.64 Yes -26 0.42 No 36 34.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 53547550 - NM_014781 RB1CC1 1 0.4 0.25 12 -3.09 0 9 4.51 No 36 0.51 No 25 0.67 Yes -42 0.75 Yes 22 38.09 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 53558407 - NM_014781 RB1CC1 1 1.83 1.24 49 4.78 78.63 31 5.43 No 47 0.87 Yes 0 0 No -30 0.59 No 40 69.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 53562771 - NM_014781 RB1CC1 1 0.2 0.14 8 7.41 87.65 27 6.93 Yes 14 0.45 No 0 0 No -24 0.6 No 46 82.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 53564197 - NM_014781 RB1CC1 1 0.25 0.18 11 7.75 87.74 22 6.3 Yes 9 1.15 Yes 0 0 No -21 0.83 Yes 49 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 53571444 - NM_014781 RB1CC1 1 0.39 0.25 15 -2.65 0 38 5.89 Yes 59 0.17 No 0 0 No -37 0.8 Yes 33 81.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 53573582 - NM_014781 RB1CC1 1 0.37 0.14 8 1.38 63.9 33 8.19 Yes 20 0.27 No 21 0.93 Yes -32 0.52 No 38 56.6 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 53586830 - NM_014781 RB1CC1 1 1.56 0.79 38 3.88 0 27 5.57 Yes 14 1.53 Yes 0 0 No -26 0.84 Yes 44 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 53589089 - NM_014781 RB1CC1 1 0.93 0.4 23 7.83 87.71 25 5.54 No 60 0.09 No 0 0 No -25 0.63 No 45 66.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 53596195 - NM_014781 RB1CC1 1 1.63 0.61 25 5.08 85.89 61 5.15 No 6 0.98 Yes 0 0 No -25 0.54 No 45 62.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 53596249 - NM_014781 RB1CC1 1 0.83 0.31 16 1.22 79.3 20 6.23 Yes 60 0.84 Yes 0 0 No -26 0.56 No 44 42.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 53598717 - NM_014781 RB1CC1 1 2.23 0.79 41 6.34 85.04 35 5.12 No -4 0.71 No 31 0.63 Yes -31 0.94 Yes 39 91.92 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 33123005 + NM_001135256 RBBP4 1 0.05 0.33 21 3.16 70.16 36 7.16 Yes 23 1.36 Yes 20 0.65 Yes -35 0.58 No 35 53.87 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 33123032 + NM_001135256 RBBP4 1 0.04 0.28 18 -3.11 0 26 5.98 Yes 50 1.35 Yes 0 0 No -25 0.53 No 45 44.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 33126206 + NM_001135256 RBBP4 1 0.05 0.29 18 6.65 85.05 24 5.55 No 64 1.27 Yes 0 0 No -23 0.73 Yes 47 67.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 33127846 + NM_001135256 RBBP4 1 0.23 1.35 50 5.58 92 27 5.19 No 14 0.37 No 26 0.79 Yes -26 0.86 Yes 44 81.59 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 33132965 + NM_001135256 RBBP4 1 0.02 0.13 8 8.46 84.34 30 6.83 Yes 17 2.2 Yes 0 0 No -29 0.84 Yes 41 94.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33133786 + NM_001135256 RBBP4 1 0.02 0.11 7 -5.08 0 54 7.75 Yes 1 0.6 No 23 0.83 Yes -53 0.52 No 17 80.67 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 33133846 + NM_001135256 RBBP4 1 0.04 0.25 17 0.88 0 21 4.48 No 61 1.1 Yes 0 0 No -44 0.77 Yes 26 64.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 33134645 + NM_001135256 RBBP4 1 0.08 0.69 31 2.54 85.61 17 4.69 No 75 0.43 No 21 0.69 Yes -21 0.74 Yes 49 61.95 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 33134645 + NM_001135256 RBBP4 1 0.02 0.15 11 2.54 85.61 17 4.69 No 75 0.43 No 21 0.69 Yes -21 0.74 Yes 49 61.95 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 33134924 + NM_001135256 RBBP4 1 0.16 1.43 48 8.52 78.66 32 5.41 No 19 0.93 Yes 0 0 No -26 0.42 No 44 52.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 33138056 + NM_001135256 RBBP4 1 0.02 0.14 8 -2.25 0 15 3.87 No 32 1.24 Yes 0 0 No -44 0.71 Yes 26 81.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33138392 + NM_001135256 RBBP4 1 0.11 0.61 30 -8.53 0 29 8.2 Yes 36 1.42 Yes 0 0 No -28 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 33139059 + NM_001135256 RBBP4 1 0.34 2.39 66 4.49 84.41 26 6.92 Yes 13 0.72 No 26 0.86 Yes -26 0.81 Yes 44 89.72 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 33139083 + NM_001135256 RBBP4 1 0.25 1.83 63 7.58 93.02 15 4.89 No 2 1.43 Yes 0 0 No -50 0.66 No 20 86.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 33142898 + NM_001135256 RBBP4 1 0.09 0.64 32 4.93 84.15 38 6.48 Yes 59 -3.47 No 0 0 No -23 0.33 No 47 37.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 33145072 + NM_001135256 RBBP4 1 0.04 0.33 18 6.72 79.91 26 7.43 Yes 13 0.96 Yes 0 0 No -25 0.85 Yes 45 90.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33145244 + NM_001135256 RBBP4 1 0.32 2.31 63 -1.38 0 30 5.5 No 62 1.4 Yes 0 0 No -36 0.89 Yes 34 94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33146126 + NM_001135256 RBBP4 1 0.48 3.49 70 8.39 92.17 25 4.93 No 47 1.34 Yes 24 0.92 Yes -24 0.75 Yes 46 84.94 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 205057944 - NM_001193273 RBBP5 1 1590.56 61.88 72 5.97 79.41 32 6 Yes -2 1.45 Yes 31 0.75 Yes -31 0.84 Yes 39 90.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 205059570 - NM_001193273 RBBP5 1 2.08 0.1 7 8.29 93.19 30 6.92 Yes 45 1.56 Yes 0 0 No -29 0.8 Yes 41 75.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 205065981 - NM_001193273 RBBP5 1 1.78 2.08 63 -3.58 0 39 5.69 Yes 63 1.39 Yes 0 0 No -38 0.77 Yes 32 87.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 205065985 - NM_001193273 RBBP5 1 0.25 0.29 18 -3.48 76.58 35 5.42 No 59 1.4 Yes 0 0 No -34 0.71 Yes 36 86.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 205070791 - NM_001193273 RBBP5 1 0.29 0.35 19 8.06 89.3 23 5.39 No 64 1.21 Yes 0 0 No -22 0.94 Yes 48 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 205070819 - NM_001193273 RBBP5 1 0.19 0.21 10 4.46 66.93 28 5.22 No 36 1.21 Yes 0 0 No -27 0.65 No 22 80.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 205073092 - NM_001193273 RBBP5 1 1.11 1.35 47 8.92 84.24 32 7.59 Yes -2 0.93 Yes 0 0 No -34 0.6 No 36 73.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 205085095 - NM_001193273 RBBP5 1 0.77 0.42 28 6.71 88.03 35 5.95 Yes 22 0.56 No 0 0 No -24 0.59 No 46 76.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 205085235 - NM_001193273 RBBP5 1 0.64 0.36 21 8.04 87.09 39 7.2 Yes 8 1.72 Yes 0 0 No -20 0.56 No 32 76.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 24560268 + NM_006910 RBBP6 1 0.1 0.14 10 1.64 74.38 36 6.51 Yes 23 1.38 Yes 0 0 No -29 0.56 No 35 77.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 24567105 + NM_006910 RBBP6 1 0.3 0.38 20 1.69 78.3 22 4.63 No 44 0.16 No 25 0.58 Yes -21 0.86 Yes 14 56.66 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 24567654 + NM_006910 RBBP6 1 0.25 0.29 20 6.24 70.54 32 5.08 No 59 1.6 Yes 0 0 No -25 0.34 No 45 21.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 24569741 + NM_006910 RBBP6 1 0.35 0.44 21 7.84 85.29 86 9.11 Yes 73 2.24 Yes 0 0 No -60 0.47 No 10 42.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 24578466 + NM_006910 RBBP6 1 0.78 0.71 31 -2.83 78.72 28 6.13 Yes 53 0.08 No 0 0 No -27 0.63 No 45 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 16865085 - NM_002893 RBBP7 1 0.09 0.29 15 5.89 83.9 20 7.94 Yes 7 1.21 Yes 0 0 No -19 0.88 Yes 51 93.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 16870641 - NM_002893 RBBP7 1 0.89 3.35 68 6.68 84.23 27 5.57 Yes 14 0.72 No 0 0 No -26 0.93 Yes 44 95.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 16870906 - NM_002893 RBBP7 1 0.37 1.63 58 9.34 85.48 27 5.76 Yes 3 0.99 Yes 0 0 No -26 0.66 No 44 74.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 16876946 - NM_002893 RBBP7 1 2.52 10.28 72 7.42 85.01 35 6 Yes 51 1.23 Yes 34 0.31 Yes -34 0.85 Yes 36 93.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 20517022 + NM_203292 RBBP8 1 0.26 0.39 26 8.6 91.02 29 5.73 Yes 16 0.87 Yes 28 0.83 Yes -28 0.85 Yes 42 90.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 20521506 + NM_203292 RBBP8 1 1.4 2.25 63 8.36 91.41 35 6.24 Yes 22 0.79 Yes 0 0 No -34 0.91 Yes 36 94.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 20537293 + NM_203292 RBBP8 1 0.54 0.82 38 8.8 83.42 51 7.71 Yes 38 1.46 Yes 0 0 No -50 0.6 No 20 71.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 20545439 + NM_203292 RBBP8 1 0.17 0.26 15 8.8 83.59 29 4.47 No 2 0.89 Yes 0 0 No -28 0.85 Yes 42 65.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 20547053 + NM_203292 RBBP8 1 0.2 0.31 15 6.67 83.5 27 6.35 Yes 14 0.77 Yes 0 0 No -26 0.86 Yes 44 93.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 20557752 + NM_203292 RBBP8 1 0.32 0.63 29 7.96 87.41 36 5.77 Yes 0 1.04 Yes 28 0.53 Yes -35 0.85 Yes 35 93.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 20569186 + NM_203292 RBBP8 1 2.36 3.71 69 1.81 79.39 28 7.13 Yes 63 0.84 Yes 0 0 No -31 0.62 No 39 71.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 20569234 + NM_203292 RBBP8 1 0.55 0.89 39 4.52 77.24 22 4.94 No 9 1.03 Yes 21 0.87 Yes -21 0.79 Yes 49 86.74 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 20579746 + NM_203292 RBBP8 1 0.58 0.86 40 4.53 72.08 30 4.1 No 6 0.54 No 0 0 No -34 0.62 No 52 51.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 20581533 + NM_203292 RBBP8 1 0.22 0.38 22 -1.07 0 31 5.54 No 18 0.1 No 30 0.56 Yes -30 0.86 Yes 40 74.99 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 390473 + NM_031229 RBCK1 1 4.08 5.26 72 4.77 81.16 36 6.4 Yes -4 0.69 No 31 0.45 Yes -38 0.41 No 39 57.28 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 390527 + NM_031229 RBCK1 1 0.7 0.97 45 3.32 80.93 31 7.88 Yes 50 0.66 No 27 0.97 Yes -30 0.89 Yes 40 94.8 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 391055 + NM_031229 RBCK1 1 6 5.19 70 7.83 85 38 7.02 Yes 11 1.76 Yes 23 0.95 Yes -23 0.63 No 33 84.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 391055 + NM_031229 RBCK1 1 105.78 94.15 72 7.83 85 38 7.02 Yes 11 1.76 Yes 23 0.95 Yes -23 0.63 No 33 84.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 391892 + NM_031229 RBCK1 1 0.15 0.13 8 8.37 80.59 48 7.99 Yes 35 1.65 Yes 0 0 No -47 0.71 Yes 23 79.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 396409 + NM_031229 RBCK1 1 0.24 0.19 12 1.62 0 15 4.12 No 2 0.14 No 0 0 No -18 0.63 No 52 71.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 397863 + NM_031229 RBCK1 1 1.41 1.29 45 1.68 72.74 28 6.24 Yes 65 -5.81 No 27 0.76 Yes -27 0.86 Yes 43 89.5 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 397869 + NM_031229 RBCK1 1 0.37 0.35 19 -6.02 0 13 3.85 No 71 -6.2 No 0 0 No -33 0.8 Yes 37 89.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 400561 + NM_031229 RBCK1 1 4.35 2.58 65 10.01 76.38 19 7.94 Yes 6 1.72 Yes 0 0 No -18 0.74 Yes 52 69.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 407934 + NM_031229 RBCK1 1 0.11 0.13 9 3.46 70.07 30 5.36 No 0 0.11 No 27 0.78 Yes -27 0.64 No 41 53.07 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 408570 + NM_031229 RBCK1 1 0.29 0.43 28 4.78 73.65 30 6.19 Yes 17 2.23 Yes 0 0 No -29 0.83 Yes 41 88.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 409542 + NM_031229 RBCK1 1 0.21 0.21 13 -9.24 0 16 4 No 20 0.8 Yes 0 0 No -32 0.8 Yes 38 82.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 409571 + NM_031229 RBCK1 1 0.95 0.9 41 2.38 0 14 4.47 No 9 1.39 Yes 25 0.69 Yes -17 0.48 No 49 52.18 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 409606 + NM_031229 RBCK1 1 0.6 0.53 30 -1.8 0 20 4.48 No 44 1.37 Yes 0 0 No -19 0.51 No 51 36.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 409609 + NM_031229 RBCK1 1 0.32 0.29 20 -1.83 77.87 23 3.46 No 47 1.37 Yes 0 0 No -22 0.56 No 58 28.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 409633 + NM_031229 RBCK1 1 0.26 0.24 13 5.19 76.31 16 4.45 No 71 1.36 Yes 0 0 No -29 0.67 Yes 50 25.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 410334 + NM_031229 RBCK1 1 0.09 0.11 7 4.43 90.55 33 6.71 Yes 28 0.52 No 0 0 No -32 0.91 Yes 38 91.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 77797246 + NM_024805 RBFA 1 0.81 0.9 38 5.76 77.93 32 5.84 Yes 6 0.68 No 31 0.64 Yes -31 0.65 No 39 79.44 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr18 77798470 + NM_024805 RBFA 1 0.19 0.18 9 -2.33 51.71 39 7.62 Yes 2 -1.18 No 24 0.7 Yes -38 0.86 Yes 32 93.38 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 77798520 + NM_024805 RBFA 1 0.13 0.11 8 3.51 85.39 19 5 No 6 0.48 No 0 0 No -18 0.79 Yes 52 65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 77798529 + NM_024805 RBFA 1 0.16 0.18 11 -2.59 0 17 4.24 No 4 1.74 Yes 0 0 No -16 0.74 Yes 54 75.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35632195 - NM_183404 RBL1 1 0.29 0.17 9 4.92 80.69 23 5.91 Yes 27 -3.28 No 0 0 No -22 0.96 Yes 48 94.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 35633976 - NM_183404 RBL1 1 0.3 0.18 10 9.98 84.25 25 5.48 No 49 0.92 Yes 0 0 No -27 0.65 No 43 63.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 35661155 - NM_183404 RBL1 1 0.15 0.1 7 6.61 79.63 22 6.18 Yes 24 1.14 Yes 0 0 No -29 0.52 No 41 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 35663079 - NM_183404 RBL1 1 1.22 0.79 38 4.05 0 43 7.06 Yes 30 0.72 No 0 0 No -42 0.84 Yes 28 80 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 35663855 - NM_183404 RBL1 1 0.53 0.4 23 5.54 90.41 19 4.8 No 65 0.24 No 0 0 No -24 0.38 No 47 35.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 35663869 - NM_183404 RBL1 1 0.19 0.14 9 2.37 69.88 37 6.61 Yes 51 0.25 No 0 0 No -37 0.57 No 33 59.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 35668707 - NM_183404 RBL1 1 0.83 0.49 23 2.29 68.87 32 5.55 No 66 0.17 No 22 0.61 Yes -31 0.8 Yes 39 49.44 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 35683696 - NM_183404 RBL1 1 0.79 0.32 21 8.86 85.43 44 6.86 Yes 31 1.03 Yes 0 0 No -43 0.68 Yes 27 78.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35684437 - NM_183404 RBL1 1 0.63 0.47 22 2.3 84.41 21 6.71 Yes 34 1.46 Yes 0 0 No -26 0.68 Yes 44 63.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 35689672 - NM_183404 RBL1 1 0.36 0.33 17 -13.87 0 24 5.53 No 11 1.24 Yes 0 0 No -23 0.93 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 35695425 - NM_183404 RBL1 1 0.74 0.36 18 3.96 64.98 77 8.06 Yes 56 0.88 Yes 32 0.8 Yes -32 0.63 No 38 73.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 35695425 - NM_183404 RBL1 1 3.25 1.74 57 3.96 64.98 77 8.06 Yes 56 0.88 Yes 32 0.8 Yes -32 0.63 No 38 73.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 35706418 - NM_183404 RBL1 1 0.42 0.29 13 0.41 71.95 35 7.36 Yes 22 1.56 Yes 0 0 No -34 0.79 Yes 36 89.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35710433 - NM_183404 RBL1 1 1.48 0.89 34 11.4 81.33 19 5.83 Yes 66 -4.08 No 23 0.3 Yes -21 0.58 No 49 59.67 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 35711845 - NM_183404 RBL1 1 0.16 0.1 7 3.67 84.57 15 4.5 No 2 1.67 Yes 0 0 No -56 0.44 No 14 75.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 35711865 - NM_183404 RBL1 1 0.96 0.57 30 3.2 0 37 6.58 Yes 48 0.36 No 0 0 No -36 0.79 Yes 34 85.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 35723643 - NM_183404 RBL1 1 0.52 0.28 16 8.05 89.29 24 6.1 Yes 11 1.49 Yes 0 0 No -23 0.73 Yes 47 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 53475063 + NM_001323611 RBL2 1 0.25 0.28 18 0.1 0 27 5.77 Yes 70 1.38 Yes 0 0 No -26 0.48 No 40 69.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 53476711 + NM_001323611 RBL2 1 0.74 0.78 37 6.75 84.02 31 5.23 No 18 0.66 No 0 0 No -23 0.55 No 47 48.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 53487596 + NM_001323611 RBL2 1 0.12 0.13 8 0.02 66.09 21 5.71 Yes 38 0.69 No 23 0.92 Yes -15 0.56 No 55 56.98 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 53488137 + NM_001323611 RBL2 1 0.47 0.68 31 2.91 83.57 32 4.33 No 24 0.94 Yes 31 0.67 Yes -31 0.71 Yes 39 94.8 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 53488620 + NM_001323611 RBL2 1 1.72 2.44 60 4.19 66.37 31 5.8 Yes 5 -2.04 No 0 0 No -27 0.49 No 37 59.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 53499682 + NM_001323611 RBL2 1 0.15 0.15 10 0.54 57.41 30 7.42 Yes 17 1.67 Yes 0 0 No -30 0.82 Yes 40 71.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53500984 + NM_001323611 RBL2 1 0.37 0.42 25 1.35 79.2 20 4.22 No 18 1.48 Yes 0 0 No -19 0.84 Yes 51 71.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53514457 + NM_001323611 RBL2 1 0.27 0.42 24 3.63 83.73 21 4.9 No 31 -4.14 No 25 0.98 Yes -20 0.69 Yes 50 59.06 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 53514482 + NM_001323611 RBL2 1 0.1 0.17 8 -2.32 0 30 5.83 Yes 17 1.64 Yes 0 0 No -29 0.88 Yes 41 90.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53514571 + NM_001323611 RBL2 1 1.07 1.63 54 9.5 88.7 35 6.12 Yes 58 -1.07 No 0 0 No -31 0.59 No 39 69.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 47010481 + NM_001204468 RBM10 1 0.49 0.53 25 4.37 83.92 32 6.28 Yes 19 1.12 Yes 0 0 No -25 0.7 Yes 45 83.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47013476 + NM_001204468 RBM10 1 0.14 0.15 10 -4.15 52.56 41 4.89 No 20 1.23 Yes 0 0 No -20 0.39 No 38 24.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 47028002 + NM_001204468 RBM10 1 0.32 0.36 20 4.89 88.97 18 4.11 No 44 -2.24 No 0 0 No -24 0.95 Yes 46 87.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 47029988 + NM_001204468 RBM10 1 0.33 0.24 14 6.3 85.88 22 5.2 No 55 1.49 Yes 0 0 No -21 0.83 Yes 49 73.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47039082 + NM_001204468 RBM10 1 0.25 0.31 17 1.57 64.45 23 6.91 Yes 48 -1.1 No 22 0.88 Yes -22 0.76 Yes 48 81.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 47040875 + NM_001204468 RBM10 1 0.9 0.96 45 7 88.13 26 5.57 Yes 60 0.1 No 34 0.86 Yes -28 0.63 No 45 46.47 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 47045916 + NM_001204468 RBM10 1 0.23 0.28 15 -0.44 60.38 51 7.26 Yes 56 1.4 Yes 0 0 No -50 0.46 No 20 45.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 66384705 + NM_006328 RBM14 1 0.05 0.13 8 7.51 81.56 23 5.74 Yes NA NA NA 0 0 No -26 0.79 Yes 44 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66385966 + NM_006328 RBM14 1 0.05 0.11 8 7.8 89.62 29 7.28 Yes 16 0.93 Yes 28 0.84 Yes -28 0.61 No 42 57.73 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 66391371 + NM_006328 RBM14 1 0.29 0.65 32 7.73 93.23 48 7.07 Yes 35 0.5 No 28 0.57 Yes -28 0.91 Yes 42 90.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 66412104 + NM_001198845 RBM14-RBM4 1 0.83 2.18 61 4.33 83.69 20 4.44 No 7 0.88 Yes 0 0 No -19 0.49 No 46 55.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 6141875 + NM_001145547 RBM17 1 0.05 0.14 8 -2.62 53.64 46 7.57 Yes 33 1.09 Yes 0 0 No -19 0.69 Yes 51 43.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 6143235 + NM_001145547 RBM17 1 0.04 0.11 7 -4.06 69.65 41 6.23 Yes 34 -2.05 No 0 0 No -33 0.89 Yes 37 91.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 6144093 + NM_001145547 RBM17 1 0.08 0.19 12 9.71 89.79 24 4.61 No 73 -5.08 No 0 0 No -23 0.52 No 46 72.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 6148106 + NM_001145547 RBM17 1 0.19 0.47 26 0.63 74.43 33 6.32 Yes 20 0.76 No 29 0.69 Yes -32 0.54 No 38 61.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 6149322 + NM_001145547 RBM17 1 0.07 0.24 13 5.57 82.94 17 6.93 Yes 4 1.05 Yes 0 0 No -29 0.55 No 43 45.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 6154552 + NM_001145547 RBM17 1 0.14 0.19 12 8.56 94.28 17 4.92 No 4 1.17 Yes 0 0 No -22 0.85 Yes 48 83.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 6157491 + NM_001145547 RBM17 1 0.11 0.25 14 3.48 73.77 33 6.08 Yes 55 0.37 No 0 0 No -32 0.55 No 37 33.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125006148 - NR_027126 RBM18 1 1.52 1.76 50 6.86 94.63 19 4.95 No 71 0.58 No 28 0.54 Yes -28 0.66 No 42 77.2 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 125007619 - NR_027126 RBM18 1 0.15 0.13 9 -3.11 76.91 26 5.94 Yes 59 1.21 Yes 0 0 No -25 0.57 No 45 70.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 125013340 - NR_027126 RBM18 1 0.11 0.13 8 3.1 69.55 41 7.63 Yes 28 0.44 No 0 0 No -40 0.74 Yes 30 75.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 125013781 - NR_027126 RBM18 1 0.15 0.18 9 6.69 92.03 23 5 No 10 1.2 Yes 0 0 No -22 0.89 Yes 48 95.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 114327689 - NM_001146699 RBM19 1 0.11 0.13 8 10.47 88.92 42 7.05 Yes 29 1.79 Yes 0 0 No -34 0.49 No 36 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 114365047 - NM_001146699 RBM19 1 0.17 0.15 9 1.06 0 27 8.16 Yes 14 1.03 Yes 38 0.54 Yes -26 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 114384276 - NM_001146699 RBM19 1 0.24 0.17 11 2.63 0 51 7.04 Yes 19 0.56 No 0 0 No -31 0.9 Yes 39 83.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 114391266 - NM_001146699 RBM19 1 0.47 0.49 25 8.81 92.53 28 5.29 No 57 0.39 No 0 0 No -27 0.68 Yes 43 55.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 150072565 - NM_018047 RBM22 1 0.09 0.17 11 4.11 83.04 27 5.74 Yes 31 1.74 Yes 0 0 No -26 0.64 No 44 49.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 150072568 - NM_018047 RBM22 1 0.77 1.46 57 10.62 85.48 24 5.48 No 28 1.76 Yes 0 0 No -23 0.69 Yes 47 55.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 150074372 - NM_018047 RBM22 1 0.14 0.17 12 4.7 72.06 42 6.45 Yes 26 0.25 No 0 0 No -41 0.66 Yes 29 65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 150080039 - NM_018047 RBM22 1 0.12 0.24 14 6.72 81.07 27 5.48 No 33 0.72 No 26 0.97 Yes -26 0.93 Yes 44 96.96 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 23373381 - NM_001077351 RBM23 1 0.29 0.38 20 10.13 84.29 16 4.75 No 74 1.33 Yes 0 0 No -21 0.7 Yes 49 75.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23373400 - NM_001077351 RBM23 1 0.28 0.39 18 0.46 0 52 7.77 Yes 55 1.33 Yes 38 0.47 Yes -51 0.57 No 19 62.14 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 23374218 - NM_001077351 RBM23 1 0.35 0.54 31 5.49 0 29 7.17 Yes 16 1.28 Yes 24 0.74 Yes -28 0.49 No 46 63.12 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 23374431 - NM_001077351 RBM23 1 0.37 0.54 25 5.04 76.74 19 5.83 Yes 42 1.62 Yes 29 0.43 Yes -54 0.6 No 16 61.53 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 23377950 - NM_001077351 RBM23 1 0.26 0.13 8 5.97 89.92 19 8.08 Yes 6 1.11 Yes 24 0.95 Yes -24 0.93 Yes 46 89.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 23381113 - NM_001077351 RBM23 1 0.21 0.28 15 2.95 0 61 9.25 Yes 48 1.17 Yes 27 0.03 Yes -49 0.77 Yes 21 74.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 23383031 - NM_001077351 RBM23 1 0.6 0.72 33 5.42 84.17 27 5.74 Yes 42 1.47 Yes 26 0.84 Yes -54 0.72 Yes 16 93.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 23383055 - NM_001077351 RBM23 1 2.22 2.76 63 3.55 83.95 31 7.87 Yes 18 1.48 Yes 30 0.92 Yes -30 0.94 Yes 40 95.13 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 23386376 - NM_001077351 RBM23 1 0.72 0.89 37 9.08 90.4 19 4.9 No 60 0.32 No 24 0.83 Yes -24 0.53 No 46 54.63 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 23387012 - NM_001077351 RBM23 1 0.98 1.19 46 4.61 87.52 19 5.95 Yes 6 1.38 Yes 32 0.71 Yes -32 0.53 No 33 72.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 23387925 - NM_001077351 RBM23 1 0.92 1.11 45 8.72 78.47 25 6.48 Yes 12 0.72 No 0 0 No -24 0.62 No 46 58.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 73529714 + NM_021239 RBM25 1 0.05 0.13 9 4.66 80.12 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.8 Yes 50 88.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 73531679 + NM_021239 RBM25 1 4.73 11.01 72 9 88.27 20 5.66 Yes 7 0.06 No 27 0.36 Yes -27 0.62 No 43 60.9 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 73536560 + NM_021239 RBM25 1 0.32 0.76 42 4.19 0 45 7.32 Yes 32 0.12 No 44 0.12 Yes -44 0.36 No 26 38.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 73552689 + NM_021239 RBM25 1 0.07 0.26 16 6.2 86.91 33 6.11 Yes 20 0.77 Yes 0 0 No -28 0.47 No 37 78.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 73555077 + NM_021239 RBM25 1 0.84 2.68 61 8.3 96.03 23 6.4 Yes 10 0.6 No 22 0.86 Yes -22 0.78 Yes 48 84.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 73558029 + NM_021239 RBM25 1 0.47 1.43 54 5.5 88.68 22 5.51 No 9 1.33 Yes 0 0 No -21 0.95 Yes 49 94.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 73567008 + NM_021239 RBM25 1 3.49 6.36 72 2.08 66.2 32 6.49 Yes 7 1.76 Yes 31 0.91 Yes -31 0.67 Yes 39 83.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 73572568 + NM_021239 RBM25 1 0.17 0.28 15 -1.74 77.31 34 6.16 Yes 21 0.86 Yes 0 0 No -33 0.74 Yes 37 92.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 73578016 + NM_021239 RBM25 1 0.11 0.29 14 4.21 76.48 17 5.29 No 4 0.98 Yes 21 0.52 Yes -21 0.7 Yes 50 58.65 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 79895437 - NM_001286631 RBM26 1 2 3.43 67 10.9 82.04 31 7.07 Yes 18 0.27 No 0 0 No -30 0.7 Yes 40 79.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 79908366 - NM_001286631 RBM26 1 0.06 0.1 7 5.28 76.95 48 6.69 Yes 26 0.11 No 0 0 No -25 0.6 No 45 76.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 79908624 - NM_001286631 RBM26 1 0.39 0.58 27 6.79 76.6 21 4.87 No 73 1.4 Yes 0 0 No -32 0.85 Yes 38 78.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 79910671 - NM_001286631 RBM26 1 0.5 0.78 38 3.45 70.19 38 6.39 Yes 25 1.04 Yes 0 0 No -26 0.68 Yes 44 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 79928706 - NM_001286631 RBM26 1 229.98 106.78 72 0.73 81.65 22 7.61 Yes 9 1.06 Yes 21 0.85 Yes -21 0.52 No 39 46.1 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 79939854 - NM_001286631 RBM26 1 482.31 169.88 72 5.26 88.6 23 4.39 No 21 0.53 No 22 0.9 Yes -22 0.81 Yes 48 66.55 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr13 79940361 - NM_001286631 RBM26 1 13.73 19.42 72 11.42 93.74 26 7.42 Yes 13 1.54 Yes 32 0.66 Yes -26 0.67 Yes 44 67.67 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 79940906 - NM_001286631 RBM26 1 0.28 0.6 30 6.39 82.13 29 6.48 Yes 48 -2.72 No 0 0 No -28 0.53 No 42 72.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 79945295 - NM_001286631 RBM26 1 2.32 4.76 70 1.32 79.14 21 4.83 No 66 1.09 Yes 0 0 No -25 0.7 Yes 45 64.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 79945317 - NM_001286631 RBM26 1 0.09 0.19 12 1.42 76.5 44 6.8 Yes 44 1.09 Yes 22 0.8 Yes -20 0.59 No 50 75.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr13 79951649 - NM_001286631 RBM26 1 0.09 0.13 9 -3.06 83.57 30 7.26 Yes 31 0.4 No 0 0 No -29 0.7 Yes 41 82.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 79953032 - NM_001286631 RBM26 1 0.1 0.15 9 3.36 0 14 4.47 No 30 0.87 Yes 0 0 No -32 0.52 No 38 70.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 79954344 - NM_001286631 RBM26 1 0.09 0.13 7 4.76 91.86 20 4.69 No 57 0.91 Yes 0 0 No -19 0.87 Yes 51 83.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 79972320 - NM_001286631 RBM26 1 0.11 0.19 12 6.81 87.66 37 6.56 Yes 24 0.64 No 0 0 No -37 0.67 Yes 33 73.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 145602974 + NM_018989 RBM27 1 0.09 0.17 9 -0.23 0 12 4.24 No 62 1.38 Yes 0 0 No -30 0.65 No 40 53.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 145602792 + NM_018989 RBM27 1 0.08 0.13 9 2.61 77.18 30 8.28 Yes 34 -2.31 No 0 0 No -24 0.85 Yes 46 85.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 145602974 + NM_018989 RBM27 1 0.32 0.57 31 -0.23 0 12 4.24 No 62 1.38 Yes 0 0 No -30 0.65 No 40 53.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 145610216 + NM_018989 RBM27 1 6.89 10.29 72 3.99 78.09 37 7.68 Yes 24 1.71 Yes 39 0.74 Yes -36 0.86 Yes 34 84.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 145610609 + NM_018989 RBM27 1 0.18 0.22 13 1.23 0 49 4.39 No 0 -1.79 No 0 0 No -36 0.45 No 39 59.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 145664175 + NM_018989 RBM27 1 0.06 0.14 9 -0.51 0 35 5.79 Yes 54 -4.27 No 32 0.35 Yes -23 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 145664177 + NM_018989 RBM27 1 0.1 0.21 12 -0.94 0 37 5.95 Yes 56 -4.26 No 32 0.35 Yes -25 0.54 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 127955098 - NM_018077 RBM28 1 0.13 0.11 8 -6.33 0 14 4 No 35 0.83 Yes 26 0.39 Yes -58 0.66 Yes 57 38.91 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 127958155 - NM_018077 RBM28 1 0.29 0.18 13 0.91 0 30 7.2 Yes 17 1.35 Yes 0 0 No -29 0.43 No 41 59.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 127975729 - NM_018077 RBM28 1 0.2 0.22 14 -2.39 0 22 5.72 Yes 29 0.34 No 0 0 No -28 0.76 Yes 42 89.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 127981274 - NM_018077 RBM28 1 0.78 0.56 23 6.41 77.4 22 6.16 Yes 70 0.8 Yes 21 0.5 Yes -21 0.76 Yes 49 60.81 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 127981410 - NM_018077 RBM28 1 0.4 0.29 16 6.81 89.86 46 8.42 Yes 71 0.05 No 0 0 No -30 0.76 Yes 40 85.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48434202 + NM_006743 RBM3 1 0.84 6.5 71 10.49 86.55 29 4.84 No 5 1.2 Yes 28 0.88 Yes -28 0.94 Yes 42 95.77 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 48434309 + NM_006743 RBM3 1 0.13 1.13 44 7.7 72.61 18 6.56 Yes 5 0.2 No 24 0.67 Yes -17 0.66 Yes 53 63.38 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 48434703 + NM_006743 RBM3 1 0.03 0.25 12 -21.11 0 40 10.26 Yes 27 1.82 Yes 0 0 No -39 0.3 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 48435420 + NM_006743 RBM3 1 0.02 0.22 11 -1.79 0 10 4 No 38 0.09 No 0 0 No -43 0.32 No 30 55.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 48435769 + NM_006743 RBM3 1 0.01 0.15 10 5.21 77.19 30 5.92 Yes 49 0.73 No 0 0 No -29 0.87 Yes 41 72.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 155465902 + NM_053043 RBM33 1 0.12 0.15 10 5.34 80.61 28 5.29 No 15 0.99 Yes 0 0 No -27 0.83 Yes 43 82.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 155473290 + NM_053043 RBM33 1 0.07 0.15 10 2.96 0 10 4 No 73 1.02 Yes 0 0 No -44 0.95 Yes 26 98.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 155477626 + NM_053043 RBM33 1 4.84 4.21 72 5.3 72.4 34 6.32 Yes 76 -4.21 No 33 0.24 Yes -36 0.66 No 34 57.62 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 155481650 + NM_053043 RBM33 1 0.16 0.15 11 8.85 88.97 29 6.95 Yes 16 1.05 Yes 0 0 No -28 0.87 Yes 42 82.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 155495966 + NM_053043 RBM33 1 0.15 0.15 10 8.15 87.93 31 8.01 Yes 63 1.08 Yes 0 0 No -31 0.35 No 40 56.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 155503866 + NM_053043 RBM33 1 0.53 0.25 14 9.07 81.45 40 7.54 Yes 18 1.33 Yes 30 0.47 Yes -39 0.49 No 40 45.94 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 155499987 + NM_053043 RBM33 1 0.81 0.39 22 5.11 79.25 22 5.15 No 70 -4.95 No 22 0.81 Yes -22 0.65 No 48 71.91 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 155503866 + NM_053043 RBM33 1 29.85 13.53 71 9.07 81.45 40 7.54 Yes 18 1.33 Yes 30 0.47 Yes -39 0.49 No 40 45.94 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 155556502 + NM_053043 RBM33 1 45.6 13.92 72 7.08 87.96 28 6.48 Yes 15 0.88 Yes 27 0.76 Yes -27 0.76 Yes 43 73.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 155562256 + NM_053043 RBM33 1 0.19 0.14 10 5.28 87.9 24 5 No 11 0.44 No 0 0 No -23 0.95 Yes 47 95.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 155567254 + NM_053043 RBM33 1 0.14 0.1 7 -3.76 78.03 32 5.55 No 19 0.98 Yes 0 0 No -26 0.83 Yes 44 86.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 155567791 + NM_053043 RBM33 1 0.63 0.44 27 4.64 75.45 38 4.61 No 25 0.46 No 32 0.77 Yes -25 0.62 No 45 56.46 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 235299083 - NR_144490 RBM34 1 3.58 6.33 72 -1.41 78.73 21 5.45 No 38 0.69 No 0 0 No -20 0.49 No 38 59.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235299085 - NR_144490 RBM34 1 0.06 0.11 7 -12.45 0 19 5.35 No 36 0.69 No 0 0 No -26 0.48 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235299385 - NR_144490 RBM34 1 0.18 0.44 25 -10.38 0 23 5.93 Yes 10 1.51 Yes 0 0 No -22 0.7 Yes 38 76.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 235301438 - NR_144490 RBM34 1 0.2 0.56 28 6.42 77.29 21 6.24 Yes 8 0.65 No 0 0 No -20 0.79 Yes 50 72.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 235301489 - NR_144490 RBM34 1 0.05 0.15 8 -12.86 0 47 6.21 Yes 42 1.12 Yes 0 0 No -46 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 235305324 - NR_144490 RBM34 1 0.22 0.64 26 7.26 75.15 26 5.48 No 13 0.95 Yes 0 0 No -25 0.93 Yes 45 92.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 235308331 - NR_144490 RBM34 1 0.13 0.35 22 5.72 90.92 28 5.29 No 71 0.4 No 0 0 No -27 0.57 No 14 63.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235311767 - NR_144490 RBM34 1 0.15 0.39 20 1.32 0 21 7.24 Yes 8 1.05 Yes 24 0.66 Yes -20 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 235313691 - NR_144490 RBM34 1 0.17 0.44 19 4.79 84.95 76 8.9 Yes 4 0.64 No 0 0 No -24 0.86 Yes 46 92.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 235315184 - NR_144490 RBM34 1 0.07 0.18 11 5.22 85.02 17 6.93 Yes 60 1.39 Yes 0 0 No -29 0.34 No 54 58.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 235317875 - NR_144490 RBM34 1 0.15 0.35 19 14.19 98.91 33 6.06 Yes 69 0.42 No 0 0 No -33 0.76 Yes 37 82.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 235323564 - NR_144490 RBM34 1 0.5 1.21 43 3.82 83.28 38 5.94 Yes 50 2.38 Yes 0 0 No -37 0.63 No 45 60.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 55971962 + NM_001291780 RBM38 1 0.46 0.88 37 10.45 82.24 34 5.83 Yes 39 -1.5 No 0 0 No -20 0.7 Yes 49 67.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 55974983 + NM_001291780 RBM38 1 0.84 1.67 56 10.63 95.2 28 6.88 Yes 15 1.04 Yes 27 0.91 Yes -27 0.97 Yes 43 96.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 34295118 - NM_001242600 RBM39 1 0.05 0.28 17 3.45 0 9 3.87 No 16 1.43 Yes 0 0 No -28 0.83 Yes 42 94.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34295915 - NM_001242600 RBM39 1 0.1 0.5 23 7.04 81.99 50 7.4 Yes 8 1.68 Yes 20 0.86 Yes -20 0.62 No 50 77.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 34297197 - NM_001242600 RBM39 1 93.48 189.15 72 -1.39 0 9 3.87 No 39 1.67 Yes 23 0.69 Yes -32 0.75 Yes 38 49.61 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 34297197 - NM_001242600 RBM39 1 0.06 0.11 7 -1.39 0 9 3.87 No 39 1.67 Yes 23 0.69 Yes -32 0.75 Yes 38 49.61 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 34298343 - NM_001242600 RBM39 1 1.57 3.08 67 11.51 88.56 28 6.93 Yes 15 0.89 Yes 0 0 No -27 0.8 Yes 43 84.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34301013 - NM_001242600 RBM39 1 0.04 0.17 10 1.21 0 11 3.87 No 57 1.13 Yes 0 0 No -24 0.58 No 46 51.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 34301780 - NM_001242600 RBM39 1 4.68 16.9 72 8.9 93.83 41 5.54 No 9 0.8 Yes 21 0.6 Yes -38 0.57 No 32 77.65 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 34302311 - NM_001242600 RBM39 1 0.05 0.25 14 -12.12 0 40 6.68 Yes 27 0.43 No 0 0 No -39 0.6 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 34308525 - NM_001242600 RBM39 1 0.07 0.28 17 10.38 88.27 21 7.2 Yes 8 1.48 Yes 0 0 No -20 0.7 Yes 50 77.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34309796 - NM_001242600 RBM39 1 0.2 1.39 46 2.13 0 25 8.38 Yes 12 1.23 Yes 0 0 No -24 0.9 Yes 46 92.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34314347 - NM_001242600 RBM39 1 0.02 0.1 7 5.01 88.15 17 5.6 Yes 24 1.59 Yes 0 0 No -25 0.66 No 45 46.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 34314370 - NM_001242600 RBM39 1 0.06 0.33 19 7.28 73.29 14 5.74 Yes 1 1.59 Yes 0 0 No -33 0.38 No 37 53.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 34316062 - NM_001242600 RBM39 1 0.15 0.76 37 6.33 82.36 21 5.52 No 69 0.81 Yes 0 0 No -24 0.86 Yes 46 89.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 34317285 - NM_001242600 RBM39 1 1.29 0.71 35 4.42 77.36 52 6.32 Yes 10 1.06 Yes 26 0.72 Yes -29 0.46 No 41 67.97 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 34317450 - NM_001242600 RBM39 1 1139.64 588.92 72 11.04 84.12 30 5.12 No 8 0.92 Yes 29 0.78 Yes -26 0.62 No 44 60.88 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 34317474 - NM_001242600 RBM39 1 0.7 0.39 22 2.42 55.25 14 5.26 No 1 0.42 No 25 0.93 Yes -25 0.81 Yes 57 31.79 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 34320055 - NM_001242600 RBM39 1 0.09 0.44 25 -7.77 83.79 27 5.2 No 14 0.57 No 0 0 No -26 0.88 Yes 44 85.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 34322180 - NM_001242600 RBM39 1 1.98 9.25 72 3.66 74.3 31 5.57 Yes 55 1.12 Yes 30 0.84 Yes -30 0.89 Yes 40 92.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 34323004 - NM_001242600 RBM39 1 1.45 6.99 72 11.52 93.89 30 9.33 Yes 17 1.41 Yes 29 0.69 Yes -29 0.44 No 41 65.96 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 34326544 - NM_001242600 RBM39 1 0.05 0.26 17 5.57 74.19 64 9.26 Yes -2 0.12 No 0 0 No -33 0.81 Yes 37 82.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 34327470 - NM_001242600 RBM39 1 0.1 0.39 25 8.6 92.61 29 5.53 No 49 1.03 Yes 28 0.82 Yes -28 0.82 Yes 42 70.68 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 34328520 - NM_001242600 RBM39 1 43.06 137.61 72 10.53 83.07 33 4.64 No 13 0.67 No 32 0.74 Yes -28 0.44 No 42 63.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 66406308 + NM_002896 RBM4 1 0.03 0.1 7 6.27 71.98 43 8.98 Yes 30 0.83 Yes 0 0 No -31 0.52 No 28 52.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 66407148 + NM_002896 RBM4 1 0.45 1.33 49 2.5 0 15 4.58 No 2 0.62 No 24 0.82 Yes -49 0.64 No 21 42.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 106310046 - NM_001171080 RBM41 1 8.39 0.39 19 3.34 68.73 31 4.8 No 65 -5.6 No 26 0.91 Yes -26 0.63 No 44 58.89 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 106312561 - NM_001171080 RBM41 1 1 0.42 22 7.95 85.86 36 6.16 Yes 27 0.8 Yes 0 0 No -35 0.7 Yes 35 74.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 106312561 - NM_001171080 RBM41 1 0.62 0.24 15 7.95 85.86 36 6.16 Yes 27 0.8 Yes 0 0 No -35 0.7 Yes 35 74.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 106313656 - NM_001171080 RBM41 1 1.58 0.61 31 11.29 86.45 26 4.01 No 23 0.62 No 25 0.71 Yes -25 0.6 No 45 56.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 106356699 - NM_001171080 RBM41 1 35.88 13.11 72 6.06 79.16 51 6.34 Yes 38 0.46 No 26 0.59 Yes -26 0.67 Yes 37 64.57 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 106358784 - NM_001171080 RBM41 1 0.9 0.53 28 0.5 72.87 34 7.11 Yes 7 0.82 Yes 0 0 No -29 0.7 Yes 41 81.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 106358871 - NM_001171080 RBM41 1 0.28 0.15 8 8.17 76.55 34 6.67 Yes 21 1.71 Yes 0 0 No -33 0.87 Yes 37 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 106359475 - NM_001171080 RBM41 1 4.54 1.93 61 5.17 73.92 18 4.1 No 5 0.26 No 21 0.8 Yes -21 0.75 Yes 49 76.74 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 36123999 + NM_024321 RBM42 1 66.19 46.11 72 10.26 87.41 26 5.48 No 13 1.82 Yes 25 0.96 Yes -25 0.87 Yes 45 88.67 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 36124002 + NM_024321 RBM42 1 1.28 0.86 43 4.5 80.34 29 5.74 Yes 16 1.82 Yes 25 0.96 Yes -28 0.87 Yes 42 86.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 36123999 + NM_024321 RBM42 1 1.97 1.47 48 10.26 87.41 26 5.48 No 13 1.82 Yes 25 0.96 Yes -25 0.87 Yes 45 88.67 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 36128151 + NM_024321 RBM42 1 0.36 0.71 36 6.57 80.61 25 5.55 No 12 0.72 No 24 0.88 Yes -24 0.95 Yes 46 88.95 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 152118024 - NM_198557 RBM43 1 1.68 0.17 10 8.12 86.55 28 5.22 No 15 -0.48 No 27 0.89 Yes -27 0.87 Yes 43 88.65 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 178988563 + NM_152945 RBM45 1 0.27 0.17 9 3.29 0 12 4.24 No 39 0.88 Yes 28 0.52 Yes -27 0.76 Yes 43 65.4 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 178990748 + NM_152945 RBM45 1 0.27 0.14 8 2.88 86.19 23 4.88 No 15 1.15 Yes 0 0 No -22 0.81 Yes 48 80.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 178994085 + NM_152945 RBM45 1 0.78 0.44 22 11.59 96.32 24 5.22 No 30 0.46 No 26 0.79 Yes -24 0.89 Yes 46 89.83 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 40434877 - NM_001098634 RBM47 1 1.29 1.54 48 2.75 78.42 34 6.01 Yes 21 2.03 Yes 0 0 No -33 0.77 Yes 37 78.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 40438662 - NM_001098634 RBM47 1 22.5 11.32 72 4.52 80.31 30 7.61 Yes 17 1.55 Yes 0 0 No -29 0.76 Yes 41 93.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 40453197 - NM_001098634 RBM47 1 0.23 0.24 13 7.54 85.17 30 6.15 Yes 17 1.73 Yes 0 0 No -29 0.76 Yes 41 85.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 40487908 - NM_001098634 RBM47 1 1.08 1.03 43 10.47 93.81 33 6.63 Yes 20 1.89 Yes 0 0 No -32 0.91 Yes 38 93.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 40553467 - NM_001098634 RBM47 1 0.6 0.14 8 7.44 78.86 35 7.46 Yes 22 0.5 No 0 0 No -34 0.94 Yes 36 94.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 40597924 - NM_001098634 RBM47 1 0.63 0.13 8 9.19 98.73 27 6.16 Yes 14 1.26 Yes 0 0 No -24 0.55 No 44 65.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 40598818 - NM_001098634 RBM47 1 1.02 0.21 12 12.82 92.12 22 6.73 Yes 15 1.43 Yes 0 0 No -27 0.8 Yes 43 86.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 40601105 - NM_001098634 RBM47 1 0.63 0.14 8 2.99 83.03 23 5.83 Yes 10 1.07 Yes 0 0 No -22 0.8 Yes 48 84.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 40601108 - NM_001098634 RBM47 1 0.4 0.11 7 5.39 78.8 20 5.57 Yes 7 1.08 Yes 0 0 No -19 0.71 Yes 51 77.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 92161722 + NM_032120 RBM48 1 0.27 0.15 10 0.9 0 37 6.98 Yes 52 0.34 No 0 0 No -29 0.5 No 41 49.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 92163551 + NM_032120 RBM48 1 6.68 3.97 68 11.76 87.99 36 6.43 Yes 23 0.61 No 0 0 No -23 0.5 No 49 64.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 92165747 + NM_032120 RBM48 1 3.98 1.75 54 11.6 97.02 31 9.41 Yes 18 1.72 Yes 0 0 No -30 0.9 Yes 40 92.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66433132 - NM_031492 RBM4B 1 0.59 0.19 13 4.99 75.39 43 7.42 Yes 30 1.85 Yes 42 0.81 Yes -42 0.93 Yes 28 95.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 66433965 - NM_031492 RBM4B 1 5.67 2 60 6.27 88.26 19 4.86 No 30 2.02 Yes 23 0.44 Yes -25 0.54 No 51 42.06 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 50127815 + NM_005778 RBM5 1 0.1 0.11 8 -10.69 0 20 5.7 Yes 7 0.89 Yes 0 0 No -29 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 50129477 + NM_005778 RBM5 1 0.06 0.11 7 -15.24 70.58 34 5.91 Yes 21 0.87 Yes 0 0 No -33 0.67 Yes 37 59.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 50131154 + NM_005778 RBM5 1 0.06 0.14 9 -10.82 68.45 30 5.38 No -4 0.64 No 0 0 No -29 0.88 Yes 41 79.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 50143059 + NM_005778 RBM5 1 0.35 0.64 37 6.16 72.83 29 5.67 Yes 16 0.58 No 0 0 No -26 0.49 No 42 61.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 50144450 + NM_005778 RBM5 1 0.15 0.24 14 8.47 83.04 28 5.57 Yes 37 0.97 Yes 27 0.51 Yes -20 0.64 No 52 59.4 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 50145673 + NM_005778 RBM5 1 0.17 0.28 17 2.41 0 12 4.24 No 16 0.47 No 0 0 No -29 0.73 Yes 42 68.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 50147041 + NM_005778 RBM5 1 0.05 0.11 7 -3.4 0 15 3.12 No 14 2.1 Yes 0 0 No -26 0.91 Yes 44 95.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50147769 + NM_005778 RBM5 1 0.08 0.15 11 3.77 0 19 4.58 No 6 0.7 No 23 0.72 Yes -18 0.64 No 52 78.46 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 50148114 + NM_005778 RBM5 1 0.12 0.21 10 1.53 85.33 31 7.68 Yes 18 0.61 No 0 0 No -30 0.78 Yes 40 74.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 50148114 + NM_005778 RBM5 1 1.78 3.14 69 1.53 85.33 31 7.68 Yes 18 0.61 No 0 0 No -30 0.78 Yes 40 74.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 50150842 + NM_005778 RBM5 1 0.13 0.22 12 2.09 77.8 18 6 Yes 41 1.23 Yes 0 0 No -23 0.43 No 13 63.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 50152862 + NM_005778 RBM5 1 0.07 0.11 7 -2.95 84.36 26 6 Yes 13 1.93 Yes 0 0 No -25 0.77 Yes 45 89.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50001521 + NM_005777 RBM6 1 0.38 0.26 17 6.71 85.4 23 7.34 Yes 72 0.77 Yes 0 0 No -22 0.94 Yes 48 93.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50004630 + NM_005777 RBM6 1 16.77 11.53 72 8.74 93.94 31 6.48 Yes 73 0.02 No 30 0.8 Yes -30 0.9 Yes 40 88.49 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 50004765 + NM_005777 RBM6 1 3.79 2.71 66 10.75 90.06 30 5.44 No 73 1.4 Yes 0 0 No -30 0.7 Yes 40 64.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 50070929 + NM_005777 RBM6 1 0.2 0.14 10 5.95 63.51 48 6.14 Yes 23 1.12 Yes 0 0 No -35 0.84 Yes 35 74.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50084148 + NM_005777 RBM6 1 0.4 0.22 12 4.93 72.68 14 6.08 Yes 1 0.24 No 0 0 No -32 0.52 No 34 85.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 50016892 + NM_005777 RBM6 1 0.4 0.36 21 4.74 84.41 28 10.92 Yes 15 1.38 Yes 0 0 No -27 0.96 Yes 43 96.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50033651 + NM_005777 RBM6 1 0.22 0.21 11 -1.41 63.27 41 6.26 Yes 41 0.83 Yes 0 0 No -41 0.65 No 29 81.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 50084148 + NM_005777 RBM6 1 0.42 0.29 15 4.93 72.68 14 6.08 Yes 1 0.24 No 0 0 No -32 0.52 No 34 85.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 50057370 + NM_005777 RBM6 1 0.33 0.22 13 11.44 88.27 25 6.13 Yes 12 1.31 Yes 0 0 No -24 0.63 No 46 60.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 50070929 + NM_005777 RBM6 1 0.16 0.11 7 5.95 63.51 48 6.14 Yes 23 1.12 Yes 0 0 No -35 0.84 Yes 35 74.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50084148 + NM_005777 RBM6 1 6.28 4.33 69 4.93 72.68 14 6.08 Yes 1 0.24 No 0 0 No -32 0.52 No 34 85.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 50084589 + NM_005777 RBM6 1 0.19 0.14 10 1.42 64 44 7.58 Yes 31 1.05 Yes 0 0 No -43 0.54 No 32 54.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 50084592 + NM_005777 RBM6 1 1.84 1.29 51 0.35 60.82 47 7.77 Yes 34 1.04 Yes 0 0 No -46 0.49 No 29 51.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 50089168 + NM_005777 RBM6 1 0.08 0.14 9 1.34 71.84 52 8.34 Yes 10 1.16 Yes 0 0 No -22 0.83 Yes 48 90.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50091740 + NM_005777 RBM6 1 0.06 0.13 8 4.18 68.23 23 3.77 No 29 0.46 No 29 0.59 Yes -25 0.56 No 45 74.35 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 50095166 + NM_005777 RBM6 1 0.46 0.75 31 -2.91 0 12 3.87 No 70 0.14 No 0 0 No -33 0.53 No 37 66.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 50097085 + NM_005777 RBM6 1 0.13 0.17 12 -1.61 0 25 5.48 No 74 1.17 Yes 0 0 No -24 0.77 Yes 46 73.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 50098233 + NM_005777 RBM6 1 0.8 1.35 50 9.53 91.75 18 5.48 No -2 1.1 Yes 23 0.22 Yes -17 0.82 Yes 53 78.6 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 50099111 + NM_005777 RBM6 1 0.14 0.14 9 -0.35 59.79 46 7.2 Yes 69 0.84 Yes 0 0 No -37 0.45 No 20 57.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 50099315 + NM_005777 RBM6 1 0.13 0.13 9 6.75 81 26 5.29 No 41 0.72 No 0 0 No -25 0.67 Yes 45 69.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 50103011 + NM_005777 RBM6 1 0.09 0.11 7 6.46 77.9 22 6.05 Yes 9 1.07 Yes 21 0.89 Yes -21 0.75 Yes 49 89.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 50105596 + NM_005777 RBM6 1 0.8 1.1 53 9.59 84.86 18 5.29 No 54 -2.22 No 0 0 No -21 0.6 No 49 72.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 50112605 + NM_005777 RBM6 1 0.39 0.49 25 -3.43 40.37 29 6.2 Yes 16 0.32 No 28 0.45 Yes -28 0.56 No 42 43.62 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 50112609 + NM_005777 RBM6 1 0.18 0.22 12 -13.5 0 33 6.51 Yes 20 0.32 No 22 0.81 Yes -32 0.52 No 38 31.9 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 114273553 + NM_001286045 RBM7 1 0.36 0.4 22 -6.65 0 29 6.39 Yes 16 0.5 No 24 0.63 Yes -28 0.64 No 42 66.55 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 114276430 + NM_001286045 RBM7 1 53.72 41.57 72 6.12 97.24 32 5.26 No 34 0.2 No 0 0 No -22 0.69 Yes 48 84.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 145508209 + NM_005105 RBM8A 1 9.27 44.81 72 -0.59 69.42 26 6.56 Yes 13 0.62 No 22 0.82 Yes -25 0.77 Yes 45 81.21 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 145509167 + NM_005105 RBM8A 1 0.18 1.39 49 2.54 86.38 35 7.62 Yes 22 1.83 Yes 0 0 No -34 0.92 Yes 36 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 135955548 - NM_001164803 RBMX 1 0.33 0.11 8 7.14 82.49 26 5 No 32 0.36 No 0 0 No -44 0.71 Yes 44 65.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 135956612 - NM_001164803 RBMX 1 1909.31 596.18 72 9.1 87.72 17 6.45 Yes -3 0.98 Yes 21 0.63 Yes -26 0.36 No 33 55.91 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 135956621 - NM_001164803 RBMX 1 1.08 0.35 19 -3.13 0 29 5.71 Yes 67 -6.33 No 21 0.63 Yes -28 0.38 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 135956645 - NM_001164803 RBMX 1 0.66 0.21 13 3.11 70.45 39 4.23 No 76 0.15 No 21 0.63 Yes -26 0.3 No 37 42.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 135956989 - NM_001164803 RBMX 1 0.61 0.18 10 9.39 85.97 33 4.6 No 70 0.87 Yes 0 0 No -25 0.65 No 45 78.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 135957322 - NM_001164803 RBMX 1 0.07 0.6 31 -1.65 0 13 3.86 No 76 0.98 Yes 0 0 No -27 0.86 Yes 43 92.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 135957345 - NM_001164803 RBMX 1 0.02 0.15 11 3.93 73.52 26 5.39 No 53 0.97 Yes 21 0.91 Yes -29 0.65 No 41 54.24 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 135957450 - NM_001164803 RBMX 1 0.01 0.13 8 3.66 79.33 23 5.43 No 75 -5.46 No 0 0 No -22 0.94 Yes 48 94.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 129540311 + NM_016024 RBMX2 1 0.16 0.14 9 3.52 87.08 12 4.7 No -1 0.5 No 0 0 No -24 0.5 No 46 62.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 129541659 + NM_016024 RBMX2 1 0.52 0.44 25 9.91 92.91 31 7.14 Yes 18 2.07 Yes 0 0 No -30 0.83 Yes 40 91.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 26385506 + NM_203284 RBPJ 1 0.3 0.26 13 3.32 0 40 7.02 Yes 39 1.13 Yes 39 0.28 Yes -35 0.77 Yes 35 89.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 26385506 + NM_203284 RBPJ 1 0.53 0.43 20 3.32 0 40 7.02 Yes 39 1.13 Yes 39 0.28 Yes -35 0.77 Yes 35 89.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 26389803 + NM_203284 RBPJ 1 0.07 0.1 7 10.11 87.15 32 4.23 No 11 0.82 Yes 0 0 No -27 0.35 No 43 68.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 26394576 + NM_203284 RBPJ 1 0.12 0.17 9 3.08 83.2 46 4.27 No 28 0.78 Yes 0 0 No -30 0.81 Yes 40 70.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 26409681 + NM_203284 RBPJ 1 0.22 0.38 19 6.28 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.72 Yes 51 82.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 26411663 + NM_203284 RBPJ 1 0.11 0.19 11 6.49 82.02 28 5.84 Yes 15 0.56 No 22 0.67 Yes -27 0.64 No 39 67.83 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 26414551 + NM_203284 RBPJ 1 0.33 0.57 29 6.42 70.28 25 5.2 No 12 0.95 Yes 24 0.96 Yes -24 0.92 Yes 46 96.44 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 26415670 + NM_203284 RBPJ 1 0.22 0.4 20 7.68 88.78 24 4.64 No 27 0.88 Yes 0 0 No -28 0.53 No 42 71.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 30336435 + NM_001008710 RBPMS 1 0.23 0.15 8 8.21 87.02 49 5.4 No 61 -1.32 No 0 0 No -32 0.69 Yes 38 69.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 65033804 - NR_138364 RBPMS2 1 0.58 0.13 9 11.22 83.82 24 5.9 Yes 11 1.22 Yes 0 0 No -23 0.89 Yes 47 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65041667 - NR_138364 RBPMS2 1 0.52 0.18 11 5.36 77.66 32 5.81 Yes 40 -0.28 No 0 0 No -28 0.6 No 42 85.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 15116624 - NM_022340 RBSN 1 2.11 0.39 21 4.95 82.5 34 7.53 Yes 21 1.91 Yes 29 0.86 Yes -29 0.7 Yes 41 76.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 15126398 - NM_022340 RBSN 1 0.87 0.24 11 -2.59 0 10 3.79 No 48 1.82 Yes 0 0 No -45 0.42 No 25 47.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 15131848 - NM_022340 RBSN 1 1.19 0.26 17 7.8 79.99 20 4.31 No 34 0.08 No 0 0 No -23 0.76 Yes 47 69.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 15133001 - NM_022340 RBSN 1 8.56 1.86 58 10.55 76.33 63 7.9 Yes 21 0.61 No 33 0.63 Yes -33 0.78 Yes 37 91.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 15136014 - NM_022340 RBSN 1 1.48 0.33 18 9.88 89.05 19 5.48 No 56 0.37 No 0 0 No -27 0.67 Yes 43 64.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 41351290 + NM_014248 RBX1 1 1.25 10.82 72 11.97 94.25 47 6.16 Yes 28 0.88 Yes 0 0 No -46 0.51 No 24 61.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41368457 + NM_014248 RBX1 1 0.03 0.31 17 2.23 69.13 30 5.64 Yes 56 1.21 Yes 27 0.74 Yes -29 0.84 Yes 41 76.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 173908010 - NM_001300850 RC3H1 1 169.23 72.07 72 -0.07 65.97 47 7.42 Yes 34 1.22 Yes 43 0.61 Yes -46 0.6 No 24 82.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 173912727 - NM_001300850 RC3H1 1 68.4 28.97 72 2.11 75.73 18 4.69 No 46 0.46 No 18 0.75 Yes -17 0.76 Yes 53 80 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 173930967 - NM_001300850 RC3H1 1 0.1 0.11 7 4.43 81.53 16 4.67 No 3 0.22 No 21 0.53 Yes -19 0.77 Yes 51 82.78 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 173933263 - NM_001300850 RC3H1 1 5.05 4.9 72 2.61 80.34 47 7.07 Yes 18 0.71 No 0 0 No -30 0.7 Yes 40 88.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 173942670 - NM_001300850 RC3H1 1 0.47 0.31 20 4.74 84.41 24 6.2 Yes 11 1.03 Yes 0 0 No -23 0.6 No 43 61.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 173947753 - NM_001300850 RC3H1 1 2.27 2.35 62 3.66 0 10 3.54 No 28 1.03 Yes 0 0 No -24 0.8 Yes 46 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 173950112 - NM_001300850 RC3H1 1 0.12 0.13 9 5.65 87.4 24 4.63 No 65 0.67 No 0 0 No -23 0.87 Yes 47 92.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 173952033 - NM_001300850 RC3H1 1 0.31 0.22 12 -0.64 0 11 4.12 No 57 0.61 No 0 0 No -39 0.65 No 31 66.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 173952793 - NM_001300850 RC3H1 1 0.2 0.21 13 -20.63 69.69 24 6.07 Yes 11 1.29 Yes 0 0 No -23 0.76 Yes 47 67.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 173954294 - NM_001300850 RC3H1 1 1.71 1.31 47 3.63 74.19 30 6.06 Yes 17 0.4 No 0 0 No -21 0.53 No 49 69.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125613710 - NM_001100588 RC3H2 1 4.85 2.08 58 0.14 0 9 3.87 No -4 -0.8 No 0 0 No -26 0.5 No 50 49.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125616540 - NM_001100588 RC3H2 1 0.26 0.15 9 -2.49 0 10 3.66 No 33 1 Yes 0 0 No -29 0.73 Yes 41 69.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 125616861 - NM_001100588 RC3H2 1 1.14 0.65 29 4.83 75.5 32 4.94 No 66 1.62 Yes 22 0.84 Yes -22 0.8 Yes 48 69.38 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 125621197 - NM_001100588 RC3H2 1 0.69 0.53 31 8.13 81.98 21 4.9 No 8 1.1 Yes 0 0 No -20 0.9 Yes 50 93.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 125621212 - NM_001100588 RC3H2 1 0.29 0.24 13 5.36 85.65 19 5.91 Yes 6 0.42 No 0 0 No -22 0.44 No 48 44.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125627821 - NM_001100588 RC3H2 1 1.36 0.94 43 7.3 84.9 32 4.91 No 67 0.02 No 26 0.48 Yes -26 0.58 No 44 65.17 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 125634637 - NM_001100588 RC3H2 1 0.63 0.42 24 10.14 84.36 22 5.64 Yes 71 0.55 No 0 0 No -21 0.56 No 49 60.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125637601 - NM_001100588 RC3H2 1 0.15 0.11 7 9.3 84.81 22 6.41 Yes 30 1.19 Yes 0 0 No -27 0.57 No 49 66.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 125641670 - NM_001100588 RC3H2 1 0.17 0.15 9 10.57 87.64 24 8.26 Yes 40 0.34 No 0 0 No -33 0.7 Yes 37 80.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 125643232 - NM_001100588 RC3H2 1 0.17 0.15 9 8.45 92.19 24 4.22 No 72 0.4 No 0 0 No -23 0.67 Yes 47 83.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 125650971 - NM_001100588 RC3H2 1 3.39 2.04 58 6.59 84.19 25 4.61 No 9 0.1 No 0 0 No -30 0.39 No 40 56.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125656373 - NM_001100588 RC3H2 1 0.41 0.24 12 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -17 0.58 No 53 77.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 125661001 - NM_001100588 RC3H2 1 0.26 0.11 8 7.02 96.05 22 5 No 61 1.22 Yes 0 0 No -21 0.66 No 49 59.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 50112220 - NM_018191 RCBTB1 1 0.56 0.15 10 2.85 78.77 24 6.16 Yes 62 0.98 Yes 23 0.89 Yes -23 0.91 Yes 47 89.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 50121308 - NM_018191 RCBTB1 1 4.31 0.69 37 9.34 93.23 26 5.29 No 43 0.69 No 25 0.71 Yes -26 0.4 No 45 70.98 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr13 50124037 - NM_018191 RCBTB1 1 0.79 0.21 13 4.24 75.56 33 7.4 Yes 36 1.09 Yes 0 0 No -32 0.93 Yes 38 95.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 50124601 - NM_018191 RCBTB1 1 0.8 0.21 12 -14.15 73.26 32 5.63 Yes 6 1.2 Yes 0 0 No -26 0.68 Yes 39 77.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 50125228 - NM_018191 RCBTB1 1 1.64 0.42 26 2.63 0 105 10.77 Yes NA NA NA 0 0 No -31 0.5 No 41 8.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 50132471 - NM_018191 RCBTB1 1 2.24 0.79 38 6.46 83.95 84 9.05 Yes 40 1.41 Yes 0 0 No -31 0.72 Yes 39 72.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 50133344 - NM_018191 RCBTB1 1 0.66 0.22 16 11.68 95.02 27 5.55 No 71 1.26 Yes 0 0 No -29 0.59 No 46 55.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 50134138 - NM_018191 RCBTB1 1 0.52 0.21 14 5.08 90.78 24 5.08 No 59 -3.74 No 0 0 No -23 0.73 Yes 47 80.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 50141460 - NM_018191 RCBTB1 1 9.6 2.38 62 8.03 88.76 38 6.81 Yes 25 1.34 Yes 29 0.54 Yes -34 0.42 No 36 62.47 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 50154717 - NM_018191 RCBTB1 1 3.37 0.69 35 5.38 0 43 5.57 Yes 72 0.69 No 0 0 No -28 0.65 No 42 49.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49066836 - NM_001268 RCBTB2 1 0.18 0.14 10 3.6 90.6 20 4.8 No 23 0.26 No 0 0 No -19 0.71 Yes 51 50.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 49073593 - NM_001268 RCBTB2 1 0.19 0.15 8 4.45 77.5 69 8.34 Yes 28 0.39 No 0 0 No -34 0.32 No 39 49.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49078447 - NM_001268 RCBTB2 1 0.89 0.4 22 3.89 84.41 15 5 No 74 -3.91 No 0 0 No -26 0.75 Yes 44 72.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 49078527 - NM_001268 RCBTB2 1 1.76 0.85 35 4.92 81.99 24 5.06 No 68 -3.6 No 0 0 No -27 0.43 No 43 61.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49078527 - NM_001268 RCBTB2 1 0.27 0.13 7 4.92 81.99 24 5.06 No 68 -3.6 No 0 0 No -27 0.43 No 43 61.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49086259 - NM_001268 RCBTB2 1 0.67 0.5 26 -1.42 70.99 15 4.38 No 57 1.47 Yes 21 0.64 Yes -57 0.45 No 40 40.47 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 49087029 - NM_001268 RCBTB2 1 0.45 0.35 19 3.28 85.49 27 7.13 Yes 14 1.42 Yes 0 0 No -26 0.87 Yes 44 91.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 49091751 - NM_001268 RCBTB2 1 1.43 0.5 27 11.55 90.77 38 6.08 Yes 67 -2.49 No 0 0 No -30 0.5 No 40 33.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 49092277 - NM_001268 RCBTB2 1 0.54 0.18 12 6.25 89.97 28 4.81 No 32 -0.61 No 0 0 No -23 0.56 No 47 64.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28859185 + NM_001048194 RCC1 1 0.94 1.18 42 6.45 80.12 28 7.72 Yes 15 2.21 Yes 27 0.94 Yes -27 0.72 Yes 43 90.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 28862121 + NM_001048194 RCC1 1 0.12 0.31 18 4.73 76.07 32 5.91 Yes 19 1.23 Yes 31 0.81 Yes -31 0.71 Yes 39 78.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 74470832 - NM_148842 RCC1L 1 0.16 0.32 18 6.65 78.35 24 5.06 No 57 -4.67 No 23 0.61 Yes -23 0.5 No 48 45.95 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 17735653 - NM_018715 RCC2 1 0.05 0.21 11 -8.17 0 22 6.86 Yes 40 1.47 Yes 0 0 No -21 0.52 No 12 34.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 17735657 - NM_018715 RCC2 1 0.08 0.31 19 3.12 71.45 18 6.56 Yes 36 1.48 Yes 0 0 No -17 0.58 No 53 72.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 17738682 - NM_018715 RCC2 1 0.09 0.46 23 -13.47 0 13 4.24 No 16 1.05 Yes 0 0 No -28 0.89 Yes 42 85.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 17738687 - NM_018715 RCC2 1 0.11 0.51 27 -3.75 0 24 5.29 No 73 1.22 Yes 0 0 No -23 0.89 Yes 47 86.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 17742756 - NM_018715 RCC2 1 0.04 0.13 7 5.37 66.15 39 5.95 Yes 10 1.28 Yes 0 0 No -22 0.7 Yes 48 68.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 17745890 - NM_018715 RCC2 1 0.04 0.22 13 8.67 85.86 26 8.87 Yes 13 1.77 Yes 0 0 No -25 0.97 Yes 45 96.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 17747322 - NM_018715 RCC2 1 0.04 0.17 8 -13.4 0 29 5.74 Yes 75 0.86 Yes 0 0 No -28 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91503563 + NM_033544 RCCD1 1 0.95 0.54 26 -0.29 0 16 3.76 No 17 0.75 No 23 0.9 Yes -29 0.9 Yes 41 93.3 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 91503586 + NM_033544 RCCD1 1 1 0.43 24 -0.8 0 19 4.26 No 40 0.73 No 0 0 No -18 0.78 Yes 18 71.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 91504141 + NM_033544 RCCD1 1 0.42 0.19 11 6.13 89.35 25 5.34 No 13 -1.57 No 0 0 No -24 0.76 Yes 46 89.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66611430 + NM_005133 RCE1 1 25.61 7.35 72 1.6 0 28 6.63 Yes 15 1.7 Yes 23 0.91 Yes -27 0.89 Yes 43 89.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 66612167 + NM_005133 RCE1 1 1.74 0.64 31 6.85 90.33 16 5.19 No 3 1.65 Yes 20 0.88 Yes -20 0.83 Yes 50 87.53 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 66612978 + NM_005133 RCE1 1 0.31 0.15 10 1.87 0 11 4.12 No 19 0.53 No 0 0 No -31 0.92 Yes 39 91.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66612991 + NM_005133 RCE1 1 0.9 0.47 23 5.55 83.38 16 4.69 No 32 0.52 No 0 0 No -23 0.41 No 47 80.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 76413253 - NM_001278539 RCHY1 1 0.43 0.36 23 7.81 83.19 30 5.19 No 17 0.78 Yes 0 0 No -29 0.55 No 41 58.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 76415874 - NM_001278539 RCHY1 1 0.25 0.25 14 7.64 72.58 21 6.15 Yes 45 1.55 Yes 23 0.57 Yes -31 0.53 No 47 64.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 76415910 - NM_001278539 RCHY1 1 0.21 0.21 13 2.35 81.88 22 8.32 Yes 9 1.59 Yes 19 0.5 Yes -21 0.53 No 35 49.31 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 76434137 - NM_001278539 RCHY1 1 0.09 0.11 7 0.65 0 12 4.24 No 46 0.74 No 0 0 No -27 0.74 Yes 43 61.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 32124549 + NM_002901 RCN1 1 0.97 1.81 54 9.18 88.62 30 5.83 Yes 10 0.1 No 25 0.75 Yes -25 0.93 Yes 45 95.7 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 32125888 + NM_002901 RCN1 1 0.08 0.24 10 0.43 0 20 4.58 No 73 0.33 No 26 0.83 Yes -19 0.73 Yes 51 61.09 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 77240678 + NM_001271837 RCN2 1 0.16 0.21 14 8.75 88.11 29 4.84 No 4 0.75 No 0 0 No -28 0.44 No 42 56.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 77241137 + NM_001271837 RCN2 1 0.2 0.28 14 7.56 91.79 22 5.1 No 9 0.52 No 0 0 No -25 0.49 No 49 57.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 211434207 + NM_001136225 RCOR3 1 1.42 0.65 34 5.09 82.53 25 5.26 No 41 -2.85 No 0 0 No -25 0.64 No 45 57.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 211434270 + NM_001136225 RCOR3 1 5.84 2.63 61 10.05 93.83 41 6.26 Yes NA NA NA 23 0.29 Yes -23 0.57 No 42 52.56 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 211440277 + NM_001136225 RCOR3 1 0.25 0.11 8 6.63 85.83 26 4.34 No 3 0.1 No 0 0 No -25 0.75 Yes 45 78.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 211441116 + NM_001136225 RCOR3 1 1.24 0.61 32 5.91 85.02 18 5.3 No 5 1.09 Yes 28 0.46 Yes -28 0.63 No 44 54.07 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 211443425 + NM_001136225 RCOR3 1 0.33 0.14 8 3.54 84.41 34 6.1 Yes 21 2.01 Yes 0 0 No -33 0.69 Yes 37 71.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211444869 + NM_001136225 RCOR3 1 3.14 1.36 50 5.33 80.72 21 5.86 Yes 8 0.06 No 20 0.59 Yes -20 0.79 Yes 50 84.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 211445037 + NM_001136225 RCOR3 1 1.05 0.46 25 2.48 77.21 16 4.38 No 54 -1.98 No 0 0 No -30 0.66 No 40 52.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 211445105 + NM_001136225 RCOR3 1 0.48 0.21 14 -9.03 68.33 30 6.34 Yes 37 0.71 No 0 0 No -29 0.75 Yes 41 85.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 211449364 + NM_001136225 RCOR3 1 0.23 0.13 7 5.21 81.16 15 5.09 No 2 1.41 Yes 0 0 No -19 0.84 Yes 51 72.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211451465 + NM_001136225 RCOR3 1 0.63 0.49 28 1.75 0 10 3.64 No 12 0.87 Yes 0 0 No -24 0.73 Yes 46 74.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211463294 + NM_001136225 RCOR3 1 0.27 0.18 11 5.94 87.94 12 5.07 No 47 1.58 Yes 0 0 No -25 0.7 Yes 45 71.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211464865 + NM_001136225 RCOR3 1 0.86 0.53 29 6.07 74.97 36 7.03 Yes 71 0.54 No 35 0.44 Yes -35 0.91 Yes 35 95.02 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 211469023 + NM_001136225 RCOR3 1 0.18 0.11 8 -2.47 0 10 3.87 No 22 1.08 Yes 0 0 No -30 0.71 Yes 40 78.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211485696 + NM_001136225 RCOR3 1 12.17 4.26 70 8.18 75.16 39 6.05 Yes 32 0.89 Yes 24 0.71 Yes -24 0.88 Yes 46 90.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 211486241 + NM_001136225 RCOR3 1 1.02 0.38 23 6.36 85.65 22 5.61 Yes 3 1.4 Yes 0 0 No -21 0.86 Yes 49 87.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 167601949 + NM_001322924 RCSD1 1 0.27 0.33 18 -7.43 0 12 4.8 No 32 1.28 Yes 0 0 No -44 0.66 No 26 64.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 167603086 + NM_001322924 RCSD1 1 0.13 0.17 10 4.64 90.91 25 5.1 No 53 -1.7 No 0 0 No -24 0.74 Yes 47 69.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 167607626 + NM_001322924 RCSD1 1 1.61 2.01 60 6.86 84.48 17 3.87 No 19 -2.02 No 24 0.87 Yes -24 0.94 Yes 46 94.44 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 167609807 + NM_001322924 RCSD1 1 0.21 0.28 15 6.24 81.66 28 5.83 Yes 68 0.97 Yes 27 0.78 Yes -27 0.87 Yes 43 87.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 167632195 + NM_001322924 RCSD1 1 0.43 0.51 27 -0.7 62.12 47 6.93 Yes 34 0.94 Yes 0 0 No -46 0.56 No 24 79.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 167653141 + NM_001322924 RCSD1 1 0.15 0.24 14 -4.26 0 32 6.69 Yes 19 1.67 Yes 0 0 No -35 0.52 No 35 80.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 167673986 + NM_001322924 RCSD1 1 0.82 1.54 51 8.14 92.29 30 5.51 No 70 0.89 Yes 0 0 No -25 0.45 No 41 73.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68149917 - NM_001252650 RDH11 1 0.14 0.18 11 2.52 75.24 27 5.61 Yes 70 1.51 Yes 0 0 No -22 0.75 Yes 48 86.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68157926 - NM_001252650 RDH11 1 0.12 0.22 13 3.1 71.89 22 5.88 Yes 71 0.03 No 0 0 No -27 0.59 No 43 31.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68158039 - NM_001252650 RDH11 1 0.06 0.11 8 4.19 73.46 26 5.57 Yes 13 0.47 No 0 0 No -25 0.78 Yes 45 66.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68159564 - NM_001252650 RDH11 1 0.12 0.19 10 8.55 89.69 32 4.77 No 67 1.49 Yes 0 0 No -21 0.48 No 49 54.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 55559626 - NM_001145971 RDH13 1 2.5 0.64 28 7.41 77.66 30 5.39 No 17 0.6 No 29 0.75 Yes -22 0.6 No 48 72.82 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 55562371 - NM_001145971 RDH13 1 1.12 0.26 16 7.79 88.12 37 6.87 Yes 24 1.31 Yes 0 0 No -31 0.65 No 39 77.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 110102783 - NM_001260493 RDX 1 0.13 0.35 19 -5.41 43.2 16 3.73 No 33 0.12 No 28 0.6 Yes -15 0.5 No 24 38.95 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 110104195 - NM_001260493 RDX 1 0.05 0.1 7 1.79 0 19 4.35 No 41 0.53 No 0 0 No -33 0.72 Yes 37 96.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 110108672 - NM_001260493 RDX 1 0.07 0.24 13 4.15 66.12 23 6.08 Yes 10 0.05 No 0 0 No -33 0.62 No 48 72.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 110109482 - NM_001260493 RDX 1 0.08 0.22 12 2.73 80.12 20 7.09 Yes 7 1.18 Yes 0 0 No -19 0.56 No 51 75.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 110119482 - NM_001260493 RDX 1 0.05 0.14 8 8.2 87.92 30 4.55 No 61 0.85 Yes 0 0 No -30 0.67 Yes 40 76.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 110124350 - NM_001260493 RDX 1 0.06 0.15 10 8.29 95.42 25 7.21 Yes 12 1.37 Yes 0 0 No -20 0.81 Yes 50 87.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 110128653 - NM_001260493 RDX 1 0.22 0.43 22 3.11 72.22 32 6.04 Yes 54 1.15 Yes 22 0.7 Yes -31 0.44 No 39 46.31 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 110131689 - NM_001260493 RDX 1 0.14 0.36 22 5.89 87.02 31 6.08 Yes 18 0.75 No 0 0 No -30 0.89 Yes 40 92.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 110134161 - NM_001260493 RDX 1 0.58 1.46 50 11.08 80.94 30 5.75 Yes 17 1.18 Yes 0 0 No -29 0.77 Yes 41 81.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 110143777 - NM_001260493 RDX 1 0.1 0.15 10 5.41 74.75 20 7.14 Yes 7 0.96 Yes 19 0.56 Yes -19 0.65 No 51 78.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 110150478 - NM_001260493 RDX 1 0.18 0.19 12 -3.09 0 33 6.04 Yes 73 0.28 No 20 0.76 Yes -32 0.57 No 38 58.66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 110157933 - NM_001260493 RDX 1 0.17 0.17 10 8.42 86.87 20 5.57 Yes 7 1.17 Yes 0 0 No -28 0.76 Yes 42 81.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24647019 + NM_001048205 REC8 1 1.09 0.25 17 7 74.6 37 7.47 Yes 24 2 Yes 0 0 No -36 0.93 Yes 34 95.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24647073 + NM_001048205 REC8 1 0.79 0.17 10 4.28 78.45 20 4.9 No 7 -0.94 No 0 0 No -19 0.85 Yes 51 85.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 24649071 + NM_001048205 REC8 1 0.22 0.14 9 4.14 79.9 24 5.2 No 74 1.58 Yes 0 0 No -23 0.94 Yes 47 91.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24649224 + NM_001048205 REC8 1 0.54 0.46 23 -0.88 0 15 4.24 No 2 0.13 No 28 0.64 Yes -14 0.57 No 56 74.57 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 24649232 + NM_001048205 REC8 1 0.8 0.71 33 -2.05 0 11 4.12 No -2 0.29 No 28 0.64 Yes -45 0.32 No 48 67.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 21626576 - NM_032941 RECQL 1 0.05 0.15 7 -14.04 0 28 6.81 Yes 15 0.55 No 0 0 No -27 0.37 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 21627930 - NM_032941 RECQL 1 0.48 0.96 43 4.95 76.36 62 9.42 Yes 49 0.5 No 19 0.88 Yes -30 0.62 No 40 46.96 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 21628516 - NM_032941 RECQL 1 0.35 0.79 39 -4.37 0 66 6.68 Yes 53 1.1 Yes 0 0 No -30 0.61 No 40 64.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 21630769 - NM_032941 RECQL 1 1.31 4.69 69 8.12 92.35 22 5 No 9 0.19 No 0 0 No -25 0.76 Yes 45 91.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 21641773 - NM_032941 RECQL 1 0.07 0.22 12 7.17 82.47 20 4.4 No 68 1.11 Yes 0 0 No -26 0.95 Yes 44 97.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 21650870 - NM_032941 RECQL 1 0.4 1.01 40 8.22 83.75 30 5.38 No 50 0.5 No 0 0 No -24 0.5 No 46 62.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 21652546 - NM_032941 RECQL 1 0.31 0.53 28 -2.59 0 27 6.77 Yes 70 0.75 No 0 0 No -26 0.86 Yes 44 89.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145737446 - NM_004260 RECQL4 1 1.53 0.74 43 -0.48 0 24 5.29 No 11 1.55 Yes 0 0 No -23 0.95 Yes 47 87.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145737647 - NM_004260 RECQL4 1 4.09 1.4 50 8.53 82.64 23 5.25 No 10 0.8 Yes 0 0 No -26 0.78 Yes 48 77.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145739615 - NM_004260 RECQL4 1 2.89 1.4 51 3.06 80.76 24 5.17 No 11 0.76 No 0 0 No -23 0.94 Yes 47 84.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145740427 - NM_004260 RECQL4 1 3.38 1.74 53 7.9 83.63 37 5.99 Yes 35 2.15 Yes 22 0.57 Yes -22 0.61 No 48 46.61 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 145740838 - NM_004260 RECQL4 1 14.8 8.32 72 -3.61 0 44 6.57 Yes NA NA NA 0 0 No -25 0.58 No 33 69.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 145741182 - NM_004260 RECQL4 1 0.84 0.42 22 1.86 68.34 31 4.63 No -3 0.53 No 0 0 No -27 0.53 No 40 47.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145741302 - NM_004260 RECQL4 1 0.45 0.24 12 6.54 85.43 25 5.57 Yes 12 1.35 Yes 25 0.85 Yes -24 0.94 Yes 46 95.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 145741798 - NM_004260 RECQL4 1 4.66 1.89 60 6.72 81.29 36 6.48 Yes 33 0.54 No 35 0.37 Yes -35 0.73 Yes 35 77.63 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 145742046 - NM_004260 RECQL4 1 3.21 1.35 49 11.07 85.13 30 5.48 No 44 0.54 No 23 0.82 Yes -23 0.83 Yes 47 91.31 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 73624906 - NM_004259 RECQL5 1 9.87 3.82 70 2.41 73.3 24 4.68 No 24 0.47 No 23 0.94 Yes -23 0.89 Yes 47 89.01 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 73654433 - NM_004259 RECQL5 1 0.52 0.26 15 8.85 92.65 11 6.15 Yes NA NA NA 0 0 No -25 0.52 No 38 44.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73661763 - NM_004259 RECQL5 1 0.63 0.35 18 8.59 88.56 36 6.48 Yes 23 1.23 Yes 0 0 No -35 0.96 Yes 35 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 65358932 + NM_001001330 REEP3 1 0.07 0.11 8 -9.16 77.14 27 6.54 Yes 36 1.21 Yes 0 0 No -26 0.87 Yes 44 93.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 65359429 + NM_001001330 REEP3 1 0.13 0.15 8 2.07 74.78 81 8.22 Yes 68 1.17 Yes 0 0 No -19 0.39 No 15 16.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 65361145 + NM_001001330 REEP3 1 0.26 0.32 13 6.41 95.21 34 4.89 No 73 0.54 No 0 0 No -24 0.88 Yes 46 91.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 65375326 + NM_001001330 REEP3 1 0.22 0.32 20 6.05 88.76 27 6.23 Yes 14 0.98 Yes 0 0 No -26 0.6 No 44 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 112220934 - NM_005669 REEP5 1 0.06 0.24 14 9.92 89.12 21 5.91 Yes 8 1.89 Yes 0 0 No -20 0.78 Yes 50 89.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 112222879 - NM_005669 REEP5 1 0.05 0.13 8 -19.55 0 30 7.85 Yes 17 0.37 No 0 0 No -25 0.46 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 112228515 - NM_005669 REEP5 1 0.58 1.81 54 11.49 89.37 41 8.06 Yes 28 1.03 Yes 40 0.26 Yes -40 0.65 No 30 73.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 112233188 - NM_005669 REEP5 1 0.05 0.17 11 6.12 87.83 56 7.41 Yes 5 1.19 Yes 0 0 No -27 0.82 Yes 43 87.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 112233191 - NM_005669 REEP5 1 0.17 0.57 32 4.43 86.71 53 7.22 Yes 2 1.19 Yes 0 0 No -24 0.81 Yes 46 87.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 112236506 - NM_005669 REEP5 1 0.05 0.15 9 6.78 85.73 20 6.18 Yes 7 0.18 No 0 0 No -26 0.54 No 44 61.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 112246604 - NM_005669 REEP5 1 0.05 0.19 13 9.25 81.61 20 7.62 Yes 7 1.41 Yes 0 0 No -19 0.7 Yes 51 84.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61126104 + NM_002908 REL 1 0.46 0.53 27 9.34 87.42 32 7.9 Yes 2 0.79 Yes 0 0 No -27 0.47 No 39 71.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 61127638 + NM_002908 REL 1 0.35 0.38 22 9.49 91.04 31 5.74 Yes 48 -3.36 No 0 0 No -26 0.66 No 47 55.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61130122 + NM_002908 REL 1 0.08 0.13 9 9.15 82.11 14 4.58 No 13 0.6 No 0 0 No -25 0.5 No 45 77.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 61145537 + NM_002908 REL 1 1.33 1.81 50 -5.58 0 15 4.2 No 41 0.87 Yes 0 0 No -14 0.5 No 17 57.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65422265 - NM_001145138 RELA 1 0.13 0.17 10 -1.03 0 9 3.87 No 26 -0.86 No 0 0 No -20 0.25 No 50 47.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65423067 - NM_001145138 RELA 1 0.13 0.17 10 5.99 74.66 24 5.39 No 42 -3.25 No 0 0 No -23 0.44 No 48 41.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65423125 - NM_001145138 RELA 1 0.12 0.17 11 2.91 70.15 32 6.16 Yes 42 0.8 Yes 0 0 No -28 0.54 No 42 62.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65423248 - NM_001145138 RELA 1 0.28 0.38 20 -6.76 0 14 4.47 No 70 -5.05 No 20 0.97 Yes -13 0.52 No 64 29.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 65425860 - NM_001145138 RELA 1 0.12 0.15 9 8.45 80.89 39 6.45 Yes 36 0.34 No 0 0 No -28 0.55 No 32 57.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65425941 - NM_001145138 RELA 1 0.08 0.13 7 1.61 76.21 22 5.29 No 46 1.33 Yes 0 0 No -21 0.72 Yes 12 32.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 65426821 - NM_001145138 RELA 1 0.12 0.17 10 0.72 72.53 23 4.9 No 55 -4.67 No 0 0 No -22 0.87 Yes 48 54.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 65428976 - NM_001145138 RELA 1 0.14 0.13 9 6.02 85.43 48 7.61 Yes 65 1.51 Yes 0 0 No -31 0.5 No 39 46.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65428979 - NM_001145138 RELA 1 0.13 0.11 7 4.77 75.2 45 7.41 Yes 62 1.52 Yes 0 0 No -28 0.56 No 42 51.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65429819 - NM_001145138 RELA 1 0.52 0.28 15 8.18 70.91 41 6.32 Yes 76 1.6 Yes 33 0.11 Yes -33 0.44 No 37 71.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 45519043 + NM_006509 RELB 1 0.7 0.56 24 9.47 90.1 23 4.07 No 3 1.73 Yes 0 0 No -22 0.56 No 48 62.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 45523510 + NM_006509 RELB 1 0.3 0.24 15 3.95 0 52 6.52 Yes 76 1.12 Yes 0 0 No -47 0.85 Yes 23 88.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 45525685 + NM_006509 RELB 1 0.17 0.21 12 6.86 80.7 27 7.34 Yes 14 0.62 No 0 0 No -26 0.96 Yes 44 96.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 45527833 + NM_006509 RELB 1 0.1 0.13 8 3.38 0 29 6.48 Yes 16 1.04 Yes 0 0 No -28 0.63 No 42 65.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 45534567 + NM_006509 RELB 1 0.08 0.14 8 7.71 85.66 21 7.21 Yes 8 1.24 Yes 0 0 No -20 0.86 Yes 50 93.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 45535767 + NM_006509 RELB 1 0.15 0.31 10 0.7 66.88 17 4.8 No 39 -4.9 No 26 0.87 Yes -26 0.28 No 56 36.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 45535813 + NM_006509 RELB 1 0.14 0.18 10 -2.79 0 13 4.36 No 31 1.53 Yes 0 0 No -48 0.46 No 22 81.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 45535816 + NM_006509 RELB 1 0.39 0.54 29 2.47 79.45 16 4.69 No 34 1.52 Yes 0 0 No -18 0.34 No 19 70.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 73104857 + NM_032871 RELT 1 1.47 0.89 39 9.13 86.72 29 5.66 Yes 28 -1.3 No 23 0.68 Yes -28 0.87 Yes 42 79.65 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 73105270 + NM_032871 RELT 1 0.95 0.75 37 0.55 73.68 16 4.69 No 3 -0.95 No 25 0.59 Yes -19 0.58 No 51 49.68 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 73106491 + NM_032871 RELT 1 0.26 0.18 11 -12.03 64.63 37 4.96 No 13 2.34 Yes 0 0 No -25 0.73 Yes 34 64.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 139238723 - NM_001286611 REPS1 1 0.27 0.26 15 6.06 81.47 24 5.45 No 64 0.12 No 0 0 No -23 0.87 Yes 47 83.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 139238762 - NM_001286611 REPS1 1 23.81 19.76 72 6.56 82.2 28 5.53 No 65 0.23 No 24 0.76 Yes -27 0.79 Yes 43 55.52 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 139238784 - NM_001286611 REPS1 1 0.22 0.17 11 4.79 78.38 24 5.28 No 74 0.86 Yes 23 0.63 Yes -23 0.73 Yes 47 66.94 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 139247616 - NM_001286611 REPS1 1 5.19 3.78 63 4.92 81.19 29 8.12 Yes 16 2.13 Yes 25 0.93 Yes -28 0.6 No 42 89.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 139255464 - NM_001286611 REPS1 1 1.08 0.89 34 9.95 90.07 28 4.84 No 5 1.58 Yes 23 0.64 Yes -23 0.58 No 47 82.65 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 139272298 - NM_001286611 REPS1 1 1.02 0.4 21 6.59 90.92 28 5.29 No 76 -1.65 No 27 0.69 Yes -27 0.7 Yes 43 55.62 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 139272323 - NM_001286611 REPS1 1 0.9 0.35 19 4.31 83.95 38 5.36 No 76 -2.4 No 27 0.69 Yes -37 0.71 Yes 34 79.26 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 139287920 - NM_001286611 REPS1 1 0.91 0.36 19 10.72 91.22 20 5.33 No 7 1.4 Yes 0 0 No -19 0.79 Yes 51 76.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2324001 + NM_007033 RER1 1 0.34 0.4 21 10.03 92.89 29 5.54 No 16 0.78 Yes 0 0 No -28 0.89 Yes 42 89.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2324511 + NM_007033 RER1 1 0.13 0.15 10 9.01 87.55 18 5.66 Yes 5 0.14 No 0 0 No -17 0.51 No 53 61.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 2324646 + NM_007033 RER1 1 5.18 6.07 70 8.5 87.26 30 7.8 Yes 41 1.02 Yes 0 0 No -29 0.73 Yes 41 85.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2324670 + NM_007033 RER1 1 0.31 0.36 20 3.26 83.34 20 4.68 No 65 1 Yes 0 0 No -19 0.37 No 17 54.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 2324708 + NM_007033 RER1 1 8.6 9.89 72 5.83 81.13 32 5.45 No 19 0.57 No 0 0 No -31 0.88 Yes 39 90.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 2326085 + NM_007033 RER1 1 1.9 2.19 55 7.18 75.23 33 6.16 Yes 20 1.15 Yes 0 0 No -32 0.64 No 38 68.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 2327046 + NM_007033 RER1 1 0.12 0.15 9 10.94 91.62 21 8.6 Yes 8 1.7 Yes 20 0.91 Yes -20 0.96 Yes 50 97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 2327228 + NM_007033 RER1 1 0.35 0.39 20 3.92 0 9 3.87 No 34 0.7 No 0 0 No -32 0.88 Yes 38 85.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 2332294 + NM_007033 RER1 1 0.1 0.5 27 -11.6 0 20 5.86 Yes 7 1.61 Yes 20 0.81 Yes -19 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 2333535 + NM_007033 RER1 1 0.82 3.56 71 8.89 89.32 25 5.1 No 66 -2.8 No 24 0.68 Yes -24 0.57 No 53 50.97 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 2334764 + NM_007033 RER1 1 0.06 0.29 15 7.21 89.98 29 6.32 Yes 76 -5.91 No 0 0 No -29 0.75 Yes 41 87.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 8418151 - NM_012102 RERE 1 0.4 0.26 16 9.31 90.24 34 5.29 No 30 0.85 Yes 0 0 No -33 0.39 No 44 48.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 8418974 - NM_012102 RERE 1 1.04 0.76 33 0.93 79.27 26 7.21 Yes 13 2.11 Yes 0 0 No -25 0.93 Yes 45 97.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8420065 - NM_012102 RERE 1 0.82 0.6 33 -12.93 0 9 4.47 No 66 -5.37 No 24 0.79 Yes -8 0.28 No 43 30 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 8421934 - NM_012102 RERE 1 0.88 0.89 42 -0.72 75.7 33 7.46 Yes 20 1.32 Yes 0 0 No -32 0.77 Yes 38 86.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8422888 - NM_012102 RERE 1 0.14 0.17 11 -0.35 70.49 12 5.1 No 30 0.41 No 0 0 No -42 0.86 Yes 28 78.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 8424956 - NM_012102 RERE 1 0.93 0.96 39 2.2 69.96 39 6.56 Yes 26 0.33 No 0 0 No -38 0.92 Yes 32 88.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 8601376 - NM_012102 RERE 1 0.19 0.14 8 -4.18 84.84 27 6.7 Yes 14 1.36 Yes 0 0 No -26 0.81 Yes 44 87.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8611416 - NM_012102 RERE 1 1.12 0.82 37 7.3 84.22 41 6.1 Yes 28 0.9 Yes 0 0 No -41 0.66 No 36 60.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 8616604 - NM_012102 RERE 1 0.11 0.1 7 2.01 85.77 25 4.9 No 27 0.37 No 0 0 No -54 0.67 Yes 50 75.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 8617597 - NM_012102 RERE 1 0.18 0.11 7 4.45 68.94 25 8.59 Yes -2 0.88 Yes 24 0.72 Yes -24 0.32 No 46 48.46 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 8674497 - NM_012102 RERE 1 1.2 0.69 34 7.31 81.97 31 6.62 Yes 43 0.45 No 0 0 No -30 0.58 No 40 55.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 8676639 - NM_012102 RERE 1 0.35 0.19 11 7.14 94.02 38 7.2 Yes 25 0.76 No 0 0 No -23 0.49 No 29 47.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 8683734 - NM_012102 RERE 1 0.22 0.13 9 9.01 80.01 31 5.98 Yes 18 1.22 Yes 0 0 No -21 0.73 Yes 49 72.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 8705128 - NM_012102 RERE 1 0.21 0.13 9 6.76 84.34 29 5.55 No 45 0.67 No 0 0 No -29 0.61 No 42 60.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 57791568 + NM_001193508 REST 1 0.12 0.13 8 6.87 96.84 25 7.07 Yes 12 0.58 No 0 0 No -24 0.9 Yes 46 96.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 100019239 - NR_135651 REV1 1 0.91 0.44 26 10.19 93.03 30 5.47 No 17 0.49 No 0 0 No -29 0.71 Yes 41 79.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 100019541 - NR_135651 REV1 1 0.5 0.14 10 5.25 82.51 25 5.24 No 43 0.05 No 0 0 No -25 0.54 No 45 48.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 100041362 - NR_135651 REV1 1 19.92 5.32 72 6.76 78.73 16 4.16 No 24 0.08 No 22 0.48 Yes -22 0.75 Yes 48 76.79 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 100046411 - NR_135651 REV1 1 98.91 13.39 72 6.27 82.38 28 4.28 No 15 1.2 Yes 27 0.75 Yes -27 0.37 No 43 63.07 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 100048403 - NR_135651 REV1 1 57.96 7.63 72 6.64 92.89 26 4.79 No 7 1.01 Yes 19 0.8 Yes -25 0.83 Yes 45 81.12 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 100052401 - NR_135651 REV1 1 0.56 0.28 17 -8.06 78.38 26 6.69 Yes 47 1.25 Yes 0 0 No -25 0.79 Yes 45 58.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 100053254 - NR_135651 REV1 1 0.92 0.39 17 7.45 96.35 17 3.84 No 72 1.32 Yes 24 0.83 Yes -22 0.69 Yes 49 59.11 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 100065897 - NR_135651 REV1 1 0.35 0.13 9 7.18 83.28 23 5.65 Yes 38 -3.56 No 0 0 No -22 0.6 No 48 62.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 100067964 - NR_135651 REV1 1 15.68 6.35 72 6.46 74.41 19 5 No 6 0.75 No 23 0.6 Yes -23 0.61 No 47 65.38 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 111629449 - NM_001286431 REV3L 1 1.36 1.24 51 4.42 83.2 23 5.55 No 65 1.67 Yes 22 0.93 Yes -22 0.87 Yes 48 93.46 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 111651516 - NM_001286431 REV3L 1 3.68 2.13 59 9.77 85.32 57 6.74 Yes 9 1.07 Yes 0 0 No -21 0.5 No 44 58.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 111652257 - NM_001286431 REV3L 1 0.42 0.21 10 6.6 90.18 41 6.64 Yes 28 0.38 No 0 0 No -34 0.61 No 42 50.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 111652260 - NM_001286431 REV3L 1 1.89 1.08 41 6.63 81.73 38 6.49 Yes 25 0.39 No 0 0 No -31 0.65 No 40 51.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 111677037 - NM_001286431 REV3L 1 1.69 1.18 47 8.83 90.15 32 5.56 Yes 52 0.71 No 0 0 No -25 0.6 No 45 73.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 111686246 - NM_001286431 REV3L 1 4.5 4.15 67 2.92 73.41 34 6.16 Yes 21 0.43 No 0 0 No -23 0.77 Yes 47 93.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 111689256 - NM_001286431 REV3L 1 0.23 0.19 11 2.59 59.99 23 5.58 Yes 10 1.03 Yes 26 0.18 Yes -34 0.49 No 36 60.63 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 111709106 - NM_001286431 REV3L 1 0.16 0.13 8 -6.04 0 21 4.05 No 53 1.07 Yes 0 0 No -16 0.45 No 50 65.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 111709120 - NM_001286431 REV3L 1 5.46 4.72 71 -1.26 70.9 21 4.76 No 39 1.08 Yes 24 0.76 Yes -21 0.26 No 47 50.78 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 111733365 - NM_001286431 REV3L 1 0.91 0.67 34 7.9 87.94 20 5.66 Yes 71 0.12 No 0 0 No -24 0.56 No 37 71.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 111733499 - NM_001286431 REV3L 1 0.12 0.1 7 10.17 88.78 36 6.16 Yes 62 0.35 No 0 0 No -31 0.54 No 39 79.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 111795680 - NM_001286431 REV3L 1 1.22 0.17 9 0.36 79.76 40 5.86 Yes 44 0.39 No 0 0 No -24 0.83 Yes 46 70 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 111795683 - NM_001286431 REV3L 1 2.13 0.43 24 3.23 72.25 37 5.65 Yes 41 0.38 No 0 0 No -21 0.73 Yes 52 56.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1817458 - NM_020695 REXO1 1 2.12 1.54 57 7.61 81.5 27 5.74 Yes NA NA NA 27 0.64 Yes -27 0.5 No 43 62.16 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 1818541 - NM_020695 REXO1 1 0.81 0.68 34 9.1 91.33 22 5.29 No 69 0.96 Yes 0 0 No -25 0.54 No 45 60.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1818585 - NM_020695 REXO1 1 0.15 0.13 9 2.03 0 15 3.92 No 25 0.96 Yes 0 0 No -32 0.49 No 33 83.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1820174 - NM_020695 REXO1 1 0.16 0.18 10 2.79 0 9 3.87 No -4 0.36 No 0 0 No -23 0.54 No 47 50.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1820180 - NM_020695 REXO1 1 2.3 2.39 59 4.31 76.44 22 5.29 No 68 -0.63 No 21 0.31 Yes -25 0.43 No 51 53.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 1830866 - NM_020695 REXO1 1 2.97 0.44 24 8.97 91.19 35 5.12 No 45 1.48 Yes 34 0.62 Yes -22 0.42 No 36 61.23 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 114312466 + NM_015523 REXO2 1 0.55 0.29 17 9.2 85.29 27 6.13 Yes 14 1.29 Yes 26 0.92 Yes -26 0.87 Yes 44 92.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 114315307 + NM_015523 REXO2 1 0.36 0.19 14 1.63 77.75 25 5 No 24 -1.58 No 24 0.78 Yes -20 0.59 No 46 54.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 114316709 + NM_015523 REXO2 1 0.19 0.13 8 -3.79 0 12 4.24 No 55 0.4 No 0 0 No -31 0.82 Yes 39 73.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 114318499 + NM_015523 REXO2 1 0.54 0.36 17 -4.64 0 19 4.58 No 51 -4.7 No 0 0 No -18 0.44 No 20 47.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 136277631 - NM_001279351 REXO4 1 0.34 0.32 17 4.32 80.68 41 6.4 Yes 28 0.76 No 26 0.74 Yes -40 0.67 Yes 30 67.27 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr4 39304436 - NM_002913 RFC1 1 0.14 0.17 12 1.5 62.24 32 7.2 Yes 19 0.82 Yes 0 0 No -31 0.82 Yes 39 67.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 39308325 - NM_002913 RFC1 1 40.89 54.72 72 5.1 83.96 27 6.23 Yes 14 0.83 Yes 26 0.92 Yes -26 0.92 Yes 44 92.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 39309092 - NM_002913 RFC1 1 0.38 0.49 28 10.16 88.46 33 7.66 Yes 20 2.36 Yes 32 0.93 Yes -32 0.67 Yes 38 82.64 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 39343286 - NM_002913 RFC1 1 0.13 0.21 13 5.53 76.97 35 5.45 No -4 0.95 Yes 23 0.87 Yes -23 0.72 Yes 47 61.17 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 39357618 - NM_002913 RFC1 1 0.63 0.44 26 6.4 88.76 31 5.66 Yes 48 0.14 No 28 0.64 Yes -28 0.51 No 42 68.13 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 73648225 - NM_001278792 RFC2 1 0.98 1.96 59 2.72 78.42 26 5.33 No 66 0.53 No 25 0.63 Yes -25 0.51 No 47 46.86 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 73664160 - NM_001278792 RFC2 1 0.95 1.35 46 6.46 84.66 40 7.28 Yes 27 1.88 Yes 39 0.71 Yes -39 0.89 Yes 31 92.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 34394531 + NM_002915 RFC3 1 0.05 0.1 7 2.92 72.94 35 7.91 Yes 22 1.54 Yes 0 0 No -34 0.89 Yes 36 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 34394534 + NM_002915 RFC3 1 0.37 0.71 39 5.87 88.99 38 8.09 Yes 25 1.53 Yes 0 0 No -37 0.89 Yes 33 95.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 34395274 + NM_002915 RFC3 1 0.23 0.44 23 2.7 0 9 3.87 No 27 0.33 No 0 0 No -39 0.63 No 34 51.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 34398962 + NM_002915 RFC3 1 0.11 0.33 20 7.63 89.54 28 5.29 No 15 1.55 Yes 0 0 No -27 0.93 Yes 43 96.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 34409461 + NM_002915 RFC3 1 0.21 0.28 18 10.57 89.95 17 5.37 No 4 0.54 No 0 0 No -27 0.68 Yes 43 67.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 34411600 + NM_002915 RFC3 1 3.16 3.43 68 8.75 93.48 24 6.63 Yes 11 1.59 Yes 0 0 No -23 0.58 No 47 91.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 186507850 - NM_181573 RFC4 1 0.69 1.11 44 -3.05 0 27 6.3 Yes 14 1.26 Yes 22 0.88 Yes -26 0.85 Yes 44 94.94 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 186508035 - NM_181573 RFC4 1 0.83 1.43 52 -0.91 0 18 3.22 No 71 -3.58 No 0 0 No -30 0.42 No 35 43.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 186512571 - NM_181573 RFC4 1 0.11 0.19 11 0.5 81.69 20 6.67 Yes 30 0.58 No 29 0.56 Yes -26 0.74 Yes 44 74.64 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 186522164 - NM_181573 RFC4 1 0.18 0.22 14 9.74 81.76 28 4.15 No 5 1.25 Yes 0 0 No -27 0.64 No 43 68.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 118462732 + NM_181578 RFC5 1 0.07 0.11 8 6.72 83.81 16 4.5 No 20 1.17 Yes 0 0 No -22 0.63 No 48 60.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 118465766 + NM_181578 RFC5 1 0.68 0.71 33 -0.52 0 12 4.24 No 10 1.38 Yes 0 0 No -23 0.71 Yes 47 69.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118466488 + NM_181578 RFC5 1 0.09 0.13 9 9.27 77.39 19 5.49 No 41 0.78 Yes 0 0 No -27 0.27 No 52 15.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 118466593 + NM_181578 RFC5 1 0.11 0.13 7 7.46 84.09 32 5.22 No 19 0.21 No 0 0 No -25 0.52 No 38 53.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 118466686 + NM_181578 RFC5 1 0.34 0.42 22 0.89 72.96 24 5.19 No 31 0.31 No 0 0 No -24 0.59 No 47 41.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 118468992 + NM_181578 RFC5 1 1.18 1.69 56 -0.9 0 9 3.87 No 17 1.32 Yes 0 0 No -29 0.96 Yes 41 95.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33348804 - NM_001017368 RFFL 1 1.93 1.86 61 4.72 79.13 30 8.5 Yes 17 1.39 Yes 32 0.91 Yes -29 0.89 Yes 41 90.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 33352360 - NM_001017368 RFFL 1 0.35 0.35 23 5.36 82.95 30 5.09 No 9 1.18 Yes 21 0.86 Yes -29 0.51 No 49 57.18 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 33361345 - NM_001017368 RFFL 1 0.73 0.22 12 2.95 0 47 8.71 Yes 34 1.68 Yes 0 0 No -46 0.72 Yes 24 77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33363538 - NM_001017368 RFFL 1 0.78 0.21 13 12.64 88.75 52 6.4 Yes 39 0.72 No 26 0.55 Yes -24 0.84 Yes 46 88.17 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 79002885 - NM_018339 RFK 1 0.2 0.14 9 7.71 93.7 29 5.39 No 60 -1.13 No 0 0 No -28 0.66 No 42 65.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 80008893 - NM_002917 RFNG 1 0.91 0.24 12 4.17 88.07 23 5.1 No 65 1.08 Yes 18 0.84 Yes -22 0.48 No 51 64.57 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 80009066 - NM_002917 RFNG 1 0.6 0.15 8 7.56 92.76 40 6 Yes NA NA NA 0 0 No -24 0.28 No 48 40.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53137283 - NM_052859 RFT1 1 1.12 0.86 39 7.77 95.86 26 4.73 No 50 0.23 No 0 0 No -25 0.87 Yes 45 90.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53144210 - NM_052859 RFT1 1 0.16 0.17 10 8.93 86.43 24 6.56 Yes 11 0.95 Yes 0 0 No -23 0.97 Yes 47 96.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53149310 - NM_052859 RFT1 1 0.18 0.19 11 9.93 85.45 29 4.8 No 69 0.42 No 0 0 No -26 0.52 No 46 50.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53152820 - NM_052859 RFT1 1 2.59 2.72 65 5.41 88.44 31 6.89 Yes 18 0.95 Yes 0 0 No -30 0.74 Yes 40 69.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 53155309 - NM_052859 RFT1 1 0.13 0.13 8 3.05 0 38 8.89 Yes 63 -2.31 No 0 0 No -46 0.45 No 44 64.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53155314 - NM_052859 RFT1 1 0.11 0.15 8 11.55 95.02 33 8.62 Yes 73 -2.72 No 0 0 No -41 0.43 No 49 59.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53164019 - NM_052859 RFT1 1 1.29 0.68 28 6.21 89.56 12 5.1 No -1 1.05 Yes 0 0 No -19 0.56 No 51 64.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 16358739 - NM_015150 RFTN1 1 0.05 0.25 16 -9.85 0 26 6.2 Yes -3 1.18 Yes 0 0 No -25 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 16363908 - NM_015150 RFTN1 1 1.43 8.31 72 6.2 84.63 32 9.04 Yes 62 2.28 Yes 0 0 No -31 0.96 Yes 39 96.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 16364135 - NM_015150 RFTN1 1 0.02 0.14 7 3.06 71.7 26 5.38 No 13 1.87 Yes 0 0 No -25 0.84 Yes 45 88.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 16364220 - NM_015150 RFTN1 1 0.17 1.04 40 7.6 79.76 28 5.48 No 15 0.31 No 0 0 No -27 0.96 Yes 43 95.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 16364980 - NM_015150 RFTN1 1 0.21 1.33 48 1.18 78.94 18 4.8 No -4 0.95 Yes 23 0.91 Yes -24 0.75 Yes 46 57.35 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 16457719 - NM_015150 RFTN1 1 0.14 0.75 36 9.62 96.42 30 5.53 No 3 0.52 No 29 0.8 Yes -29 0.95 Yes 41 96.25 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 16472391 - NM_015150 RFTN1 1 0.03 0.15 10 5.42 84.69 33 5.9 Yes 20 0.95 Yes 0 0 No -32 0.75 Yes 38 48.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 16508093 - NM_015150 RFTN1 1 0.04 0.33 18 8.8 79.53 36 5.98 Yes 67 0.18 No 0 0 No -35 0.81 Yes 35 84.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 16514313 - NM_015150 RFTN1 1 1.15 8.08 72 5.05 79.95 22 6.62 Yes 9 1.01 Yes 0 0 No -21 0.8 Yes 49 75.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 16522199 - NM_015150 RFTN1 1 0.04 0.25 16 6.62 79.36 30 6.48 Yes 62 0.96 Yes 0 0 No -29 0.64 No 41 66.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 16535388 - NM_015150 RFTN1 1 14.69 45.49 72 4.8 85.89 28 6.71 Yes 15 0.92 Yes 27 0.68 Yes -27 0.81 Yes 43 77.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 16547304 - NM_015150 RFTN1 1 0.2 0.63 30 8.39 88.12 23 5.88 Yes 17 0.5 No 0 0 No -22 0.69 Yes 48 67.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 175990296 - NM_022457 RFWD2 1 0.52 0.93 38 6.24 84.52 25 5.29 No 12 0.04 No 0 0 No -24 0.48 No 49 54.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 175996820 - NM_022457 RFWD2 1 0.27 0.42 22 -0.91 0 53 8.35 Yes 40 2.03 Yes 0 0 No -52 0.8 Yes 18 94.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 176048394 - NM_022457 RFWD2 1 0.13 0.18 13 6.33 91.83 18 5.67 Yes 65 0.28 No 0 0 No -24 0.73 Yes 46 64.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 176069498 - NM_022457 RFWD2 1 1.02 1.51 53 8.14 89.63 27 5.17 No 54 0.82 Yes 0 0 No -26 0.67 Yes 18 65.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 176085815 - NM_022457 RFWD2 1 0.27 0.44 22 2.2 74.48 34 7.06 Yes 21 0.91 Yes 0 0 No -33 0.61 No 42 57.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 176103037 - NM_022457 RFWD2 1 1.62 2.78 65 5.99 80.68 31 6.56 Yes 69 0.9 Yes 30 0.64 Yes -30 0.8 Yes 40 77.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 176113237 - NM_022457 RFWD2 1 3.19 2.74 66 6.09 72.6 48 6.72 Yes 35 1.15 Yes 0 0 No -41 0.71 Yes 29 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 176115704 - NM_022457 RFWD2 1 0.3 0.28 16 7.7 98.64 19 5.48 No 6 0.26 No 0 0 No -18 0.54 No 52 69.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 176145941 - NM_022457 RFWD2 1 0.16 0.13 8 11.54 93.53 40 7.57 Yes 27 1.43 Yes 0 0 No -34 0.49 No 36 50.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 176153488 - NM_022457 RFWD2 1 0.16 0.15 8 7.87 74.14 28 5.6 Yes 50 0.86 Yes 0 0 No -27 0.91 Yes 43 91.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 176170482 - NM_022457 RFWD2 1 0.29 0.22 12 8.52 84.35 91 6.64 Yes 9 1.51 Yes 0 0 No -21 0.45 No 40 26.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 74671017 - NM_018124 RFWD3 1 0.23 0.32 14 10.59 89.4 33 6.03 Yes 20 0.59 No 0 0 No -32 0.63 No 38 81.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 74682977 - NM_018124 RFWD3 1 0.17 0.19 13 7.41 87.15 21 4.91 No 38 0.09 No 0 0 No -33 0.62 No 37 45.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 74685990 - NM_018124 RFWD3 1 0.25 0.25 15 7.7 89.02 28 5.66 Yes 45 0.68 No 0 0 No -27 0.49 No 43 60.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 74698644 - NM_018124 RFWD3 1 82.92 24.78 72 10.51 87.44 31 6.65 Yes 75 1 Yes 30 0.9 Yes -30 0.93 Yes 40 95.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 74699179 - NM_018124 RFWD3 1 2.21 0.68 32 6.34 85.79 28 6.93 Yes 15 2.44 Yes 27 0.96 Yes -27 0.87 Yes 43 93.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 14089892 - NM_002918 RFX1 1 1.82 0.53 22 11.22 92.46 30 5.39 No 17 1.63 Yes 0 0 No -29 0.91 Yes 41 92.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14091499 - NM_002918 RFX1 1 0.94 0.21 11 4.24 81.62 40 6.38 Yes 71 0.03 No 0 0 No -34 0.54 No 36 72.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 14094405 - NM_002918 RFX1 1 0.59 0.13 8 1.29 72.91 26 6.24 Yes 13 1.45 Yes 0 0 No -25 0.91 Yes 45 83.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14106840 - NM_002918 RFX1 1 8.44 0.39 23 2.48 0 53 7.28 Yes 40 1 Yes 0 0 No -52 0.61 No 18 79.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 14109130 - NM_002918 RFX1 1 50.6 2.57 66 6.3 86.24 19 7.02 Yes 68 0.71 No 27 0.32 Yes -29 0.47 No 41 51.72 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 3225305 - NM_134428 RFX3 1 1.65 0.6 28 3.93 69.48 33 6.51 Yes 6 1.15 Yes 28 0.39 Yes -32 0.84 Yes 38 86.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 3229859 - NM_134428 RFX3 1 3.74 1.06 45 6.08 85.46 24 4.99 No 42 -2.44 No 0 0 No -21 0.69 Yes 49 53.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 3286610 - NM_134428 RFX3 1 1.43 0.56 27 5.87 85.67 20 6.11 Yes 7 0.65 No 0 0 No -28 0.36 No 45 47.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 3381991 - NM_134428 RFX3 1 1.62 0.58 30 5.67 75.05 32 7.34 Yes -4 0.81 Yes 0 0 No -31 0.57 No 39 74.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 3394879 - NM_134428 RFX3 1 0.77 0.28 13 6.19 88.49 25 5.1 No 31 0.23 No 0 0 No -24 0.92 Yes 46 87.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 3523762 - NM_134428 RFX3 1 51.31 3.33 68 9.71 95.16 25 9.39 Yes 12 2.02 Yes 0 0 No -24 0.5 No 46 75.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 3671476 + NR_121586 RFX3-AS1 1 1.92 0.21 11 -10.14 75.09 25 4.83 No 8 0.41 No 21 0.67 Yes -24 0.84 Yes 46 69.29 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 151316743 - NM_001025603 RFX5 1 0.18 0.43 24 0.66 0 15 4.58 No 12 -2.43 No 0 0 No -23 0.56 No 47 66.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151316753 - NM_001025603 RFX5 1 0.06 0.13 7 -9.79 0 33 6.01 Yes 48 -2.1 No 0 0 No -14 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151316776 - NM_001025603 RFX5 1 0.14 0.32 16 -10.02 0 10 4.9 No 56 -4.98 No 30 0.31 Yes -17 0.13 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 151317081 - NM_001025603 RFX5 1 2.34 5.74 71 8.07 77.47 27 4.81 No 3 1.37 Yes 27 0.94 Yes -27 0.9 Yes 43 93.16 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 151317319 - NM_001025603 RFX5 1 0.05 0.11 7 2.28 0 31 6.4 Yes 18 1.55 Yes 0 0 No -30 0.66 No 40 77.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 151317614 - NM_001025603 RFX5 1 0.15 0.36 22 7.25 85.92 24 5.2 No 17 0.74 No 0 0 No -23 0.83 Yes 47 68.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 151317661 - NM_001025603 RFX5 1 0.06 0.15 8 -2.66 0 40 8.57 Yes 27 0.35 No 35 0.8 Yes -39 0.9 Yes 31 89.99 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 151318434 - NM_001025603 RFX5 1 0.22 0.61 33 -2.16 0 33 5.74 Yes 20 1.83 Yes 28 0.88 Yes -32 0.89 Yes 38 91.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 56399079 - NM_022841 RFX7 1 0.22 0.17 11 5.14 76.72 30 6.66 Yes 71 1.73 Yes 0 0 No -29 0.86 Yes 41 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 56416108 - NM_022841 RFX7 1 0.25 0.24 10 8.77 78.04 26 6.85 Yes 13 2.14 Yes 0 0 No -25 0.82 Yes 45 94.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 56434145 - NM_022841 RFX7 1 1.56 1.19 50 6.81 81.79 28 4.97 No 49 0.28 No 0 0 No -27 0.97 Yes 43 98.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 56436349 - NM_022841 RFX7 1 2.2 2.39 60 7.52 84.52 28 8.49 Yes 45 0.63 No 0 0 No -27 0.55 No 42 40.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 56452946 - NM_022841 RFX7 1 0.13 0.15 9 0.2 64.67 39 7.59 Yes 26 2.2 Yes 38 0.75 Yes -38 0.48 No 32 87.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 56471332 - NM_022841 RFX7 1 0.84 0.89 39 5.76 88.04 36 4.93 No 23 0.44 No 35 0.48 Yes -35 0.34 No 40 41.04 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 56530820 - NM_022841 RFX7 1 0.26 0.24 15 7.95 90.74 32 7.06 Yes 1 1.31 Yes 0 0 No -31 0.42 No 39 41.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56534956 - NM_022841 RFX7 1 0.24 0.18 12 9.21 86.89 25 5.01 No 2 0.43 No 0 0 No -24 0.64 No 46 62.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19307771 + NM_001278728 RFXANK 1 0.08 0.11 7 6.31 86.28 23 6.31 Yes 10 2.12 Yes 22 0.92 Yes -22 0.87 Yes 48 94.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 19307771 + NM_001278728 RFXANK 1 78.63 98.44 72 6.31 86.28 23 6.31 Yes 10 2.12 Yes 22 0.92 Yes -22 0.87 Yes 48 94.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 19307994 + NM_001278728 RFXANK 1 655.86 194.97 72 8.14 81.96 27 4.74 No 70 -3.66 No 26 0.81 Yes -30 0.68 Yes 47 54.86 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 19309768 + NM_001278728 RFXANK 1 0.08 0.19 13 4.89 78.44 26 5.66 Yes 13 1 Yes 25 0.94 Yes -25 0.87 Yes 45 92.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 42040964 + NM_014059 RGCC 1 0.82 0.14 8 -1.19 0 11 3.87 No 19 1.12 Yes 0 0 No -31 0.92 Yes 39 94.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183830357 + NM_001297670 RGL1 1 0.64 0.47 26 2.19 74.23 30 6.54 Yes 17 1.4 Yes 0 0 No -29 0.85 Yes 41 84.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183840526 + NM_001297670 RGL1 1 0.14 0.11 8 9.91 91.83 24 6.08 Yes 74 0.6 No 0 0 No -26 0.72 Yes 44 83.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 183843332 + NM_001297670 RGL1 1 1.06 0.83 34 9.68 93.89 29 6.26 Yes 19 0.4 No 0 0 No -28 0.58 No 42 46.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 183869261 + NM_001297670 RGL1 1 0.29 0.15 11 -4.73 0 35 6.89 Yes 22 1.03 Yes 26 0.25 Yes -34 0.71 Yes 36 43.3 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 183885766 + NM_001297670 RGL1 1 0.24 0.15 11 4.67 77.52 46 7.34 Yes 33 1.84 Yes 0 0 No -21 0.56 No 40 62.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 183892804 + NM_001297670 RGL1 1 0.31 0.14 8 6.64 84.83 40 6.35 Yes 24 -0.82 No 0 0 No -27 0.43 No 43 56.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 192548244 + NM_002922 RGS1 1 0.02 0.19 8 -7.65 0 19 4.36 No 59 0.2 No 19 0.98 Yes -19 0.48 No 51 59.47 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 192548252 + NM_002922 RGS1 1 0.06 0.35 15 -5.15 0 11 4.12 No 67 0.19 No 19 0.98 Yes -27 0.48 No 60 26.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 121262845 - NM_002925 RGS10 1 0.15 0.56 26 4.19 0 36 6.48 Yes 23 -1 No 0 0 No -29 0.7 Yes 41 85.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 121262849 - NM_002925 RGS10 1 0.06 0.22 13 2.2 84.41 32 6.16 Yes 19 -0.98 No 0 0 No -25 0.74 Yes 45 84.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 121270938 - NM_002925 RGS10 1 0.06 0.25 17 5.84 87.07 32 5.74 Yes 33 1.18 Yes 0 0 No -19 0.49 No 42 64.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 121272965 - NM_002925 RGS10 1 0.42 1.58 57 7.89 91.68 48 6.71 Yes 60 1.62 Yes 0 0 No -31 0.67 Yes 39 68.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 121274968 - NM_002925 RGS10 1 0.27 1.01 43 5.4 84.61 51 7.87 Yes 38 1.69 Yes 25 0.71 Yes -25 0.78 Yes 45 79.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 121284085 - NM_002925 RGS10 1 0.06 0.22 14 9.06 89.04 22 5.83 Yes 9 1.12 Yes 0 0 No -21 0.97 Yes 49 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176793895 + NM_006480 RGS14 1 0.08 0.11 7 2.98 0 34 7.99 Yes 21 2.53 Yes 0 0 No -33 0.8 Yes 37 85.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176795036 + NM_006480 RGS14 1 0.25 0.25 12 8 82.5 20 5.23 No 70 1.13 Yes 0 0 No -20 0.6 No 50 53.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176798169 + NM_006480 RGS14 1 0.21 0.11 7 2.49 0 19 6.86 Yes 6 2.31 Yes 0 0 No -18 0.48 No 52 69.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 176798521 + NM_006480 RGS14 1 0.39 0.29 16 7.02 82.16 28 3.74 No 51 1.05 Yes 0 0 No -27 0.53 No 43 41.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 182571617 - NM_002928 RGS16 1 3.75 3.21 62 6.06 83.31 44 8.05 Yes 19 1.48 Yes 0 0 No -31 0.96 Yes 39 94.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62705413 - NM_005873 RGS19 1 0.14 0.11 8 5.99 75.54 20 5.57 Yes NA NA NA 22 0.95 Yes -24 0.64 No 46 48.71 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 54826056 + NM_003702 RGS20 1 78.04 8.74 67 5.44 81.65 39 5.04 No 26 0.83 Yes 38 0.41 Yes -38 0.61 No 32 82.95 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 54841106 + NM_003702 RGS20 1 1.18 0.17 10 5.62 86.58 25 4.94 No 35 0.99 Yes 0 0 No -24 0.91 Yes 46 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 54852138 + NM_003702 RGS20 1 3.88 0.57 24 7.65 82.87 50 8.48 Yes 37 1.29 Yes 0 0 No -49 0.56 No 21 63.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 54868502 + NM_003702 RGS20 1 2.84 1.36 35 8.22 82.82 27 4.91 No 28 0.14 No 0 0 No -29 0.57 No 41 56.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 116299078 + NM_144488 RGS3 1 0.59 0.28 13 0.39 68.11 36 7 Yes 23 2.71 Yes 0 0 No -35 0.95 Yes 35 94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 116303599 + NM_144488 RGS3 1 73.26 25.28 72 8.01 82.18 26 5.2 No 13 1.2 Yes 25 0.91 Yes -25 0.93 Yes 45 96.66 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 116306241 + NM_144488 RGS3 1 4.42 1.43 47 7.69 88.33 63 6.47 Yes 59 0.47 No 0 0 No -32 0.51 No 44 47.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 116323886 + NM_144488 RGS3 1 4.11 1.4 43 10.07 88.27 29 6.24 Yes 16 1.36 Yes 0 0 No -28 0.86 Yes 42 92.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 116344351 + NM_144488 RGS3 1 4.27 1.46 46 6.85 83.04 17 6.16 Yes 4 1.58 Yes 26 0.83 Yes -26 0.82 Yes 44 87.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 116348441 + NM_144488 RGS3 1 1.33 0.81 38 7.31 85.81 27 4.97 No 66 -3.62 No 0 0 No -26 0.92 Yes 44 92.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 227702263 + NM_032276 RHBDD1 1 13.22 1.6 58 7.96 86.79 41 4.5 No -2 1.52 Yes 26 0.69 Yes -26 0.89 Yes 44 89.74 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 227702788 + NM_032276 RHBDD1 1 22.44 2.88 64 10.23 97.18 20 6.07 Yes 41 1.23 Yes 19 0.84 Yes -19 0.67 Yes 51 86.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 227704124 + NM_032276 RHBDD1 1 1.51 0.18 9 10.44 98.16 18 5.85 Yes 5 0.65 No 30 0.65 Yes -27 0.59 No 43 64.07 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 227732278 + NM_032276 RHBDD1 1 1.26 0.93 44 3.2 80.79 28 5.28 No 0 0.76 No 0 0 No -27 0.66 Yes 49 46.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 227732281 + NM_032276 RHBDD1 1 3.6 2.54 67 5.53 90.79 31 5.56 No 3 0.73 No 0 0 No -30 0.53 No 46 49.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 227733857 + NM_032276 RHBDD1 1 0.55 0.4 21 11.16 89.06 30 5.88 Yes 17 0.86 Yes 0 0 No -29 0.8 Yes 41 81.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 227760359 + NM_032276 RHBDD1 1 1.41 1.04 41 9.65 85.48 24 6.36 Yes 11 1.47 Yes 0 0 No -23 0.79 Yes 47 87.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 227778927 + NM_032276 RHBDD1 1 0.55 0.49 29 2.31 0 29 5.92 Yes 60 -1.7 No 0 0 No -28 0.56 No 44 60.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 227788784 + NM_032276 RHBDD1 1 1.36 1.24 48 4.34 79.35 16 6.18 Yes 69 1.78 Yes 0 0 No -24 0.81 Yes 46 75.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 227788787 + NM_032276 RHBDD1 1 0.95 0.82 38 6 86.98 19 6.41 Yes 72 1.78 Yes 0 0 No -27 0.81 Yes 43 78.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 227831811 + NM_032276 RHBDD1 1 0.18 0.15 8 5.36 74.31 46 6.06 Yes 33 0.41 No 0 0 No -29 0.86 Yes 41 87.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 227853047 + NM_032276 RHBDD1 1 0.36 0.28 18 5.74 80.98 53 7.66 Yes 40 1.05 Yes 26 0.44 Yes -53 0.59 No 17 81.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr7 75513051 + NM_001346186 RHBDD2 1 0.38 0.33 19 6.23 78.24 29 6.65 Yes 16 1.84 Yes 0 0 No -28 0.88 Yes 42 79.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75513051 + NM_001346186 RHBDD2 1 0.32 0.28 19 6.23 78.24 29 6.65 Yes 16 1.84 Yes 0 0 No -28 0.88 Yes 42 79.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29656858 - NM_001329536 RHBDD3 1 23.5 7.61 72 6.15 76.28 24 9.31 Yes 11 1.45 Yes 23 0.95 Yes -23 0.87 Yes 47 89.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 29657350 - NM_001329536 RHBDD3 1 0.32 0.11 7 2.23 81.8 16 4.95 No 3 0.82 Yes 0 0 No -20 0.84 Yes 50 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29657415 - NM_001329536 RHBDD3 1 3.26 1.14 44 5.38 74.24 21 5.65 Yes 75 0.47 No 20 0.71 Yes -20 0.79 Yes 50 90.96 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 74468114 - NM_001005498 RHBDF2 1 0.31 0.1 7 4.13 69.53 24 5.48 No 37 0.9 Yes 0 0 No -49 0.68 Yes 21 55.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 74468253 - NM_001005498 RHBDF2 1 1.29 0.46 27 4.13 78.32 17 5.29 No 62 1.16 Yes 21 0.82 Yes -21 0.86 Yes 49 77.66 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 74470243 - NM_001005498 RHBDF2 1 0.39 0.18 9 0.89 68.57 26 6.48 Yes -3 0.28 No 23 0.87 Yes -25 0.87 Yes 45 77.55 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 74472152 - NM_001005498 RHBDF2 1 0.33 0.13 7 -4.24 46.48 35 6.73 Yes 22 0.63 No 0 0 No -34 0.31 No 36 15.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 74475935 - NM_001005498 RHBDF2 1 0.48 0.18 11 -3.16 77.89 33 7.75 Yes 70 -3.05 No 0 0 No -32 0.55 No 31 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 74476024 - NM_001005498 RHBDF2 1 10.77 4.03 63 2.23 0 15 4.47 No 2 0.23 No 25 0.47 Yes -21 0.8 Yes 49 70.11 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 151168527 - NM_005614 RHEB 1 0.07 0.14 9 -13.74 0 32 7.62 Yes 19 1.12 Yes 0 0 No -31 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 151178715 - NM_005614 RHEB 1 0.08 0.13 9 9.83 90.44 23 3.91 No 74 -4.82 No 0 0 No -22 0.79 Yes 48 77.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 151182456 - NM_005614 RHEB 1 0.04 0.11 7 9.99 89.38 23 5.6 Yes 10 1.37 Yes 0 0 No -29 0.51 No 41 64.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 151195267 - NM_005614 RHEB 1 0.82 1.01 38 8.94 86.39 16 6.72 Yes 3 1.95 Yes 20 0.59 Yes -31 0.44 No 39 67.47 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 2996143 + NM_001257097 RHNO1 1 0.78 0.75 31 7.43 96.26 24 5 No 11 1.2 Yes 23 0.92 Yes -23 0.76 Yes 47 87.37 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 49397813 - NM_001313945 RHOA 1 0.01 0.14 7 -7.61 77.49 31 5.92 Yes 18 0.69 No 0 0 No -30 0.75 Yes 40 75.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49398500 - NM_001313945 RHOA 1 0.26 4.31 72 2.3 87.56 45 6.93 Yes 37 0.08 No 44 0.43 Yes -44 0.85 Yes 29 76.5 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 49405875 - NM_001313945 RHOA 1 0.01 0.24 13 7.82 86.83 21 6.78 Yes 8 1.7 Yes 0 0 No -24 0.43 No 46 64.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49406097 - NM_001313945 RHOA 1 0.03 0.54 30 10.77 85.27 27 6.71 Yes 14 0.28 No 0 0 No -26 0.32 No 47 26.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 49410776 - NM_001313945 RHOA 1 0.01 0.17 12 6.47 81.72 26 6.01 Yes 57 1.93 Yes 25 0.94 Yes -25 0.93 Yes 45 96.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 95084039 + NM_014899 RHOBTB3 1 1.8 0.51 24 0.76 80.85 41 7.64 Yes 66 0.67 No 0 0 No -40 0.76 Yes 30 78.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 95093158 + NM_014899 RHOBTB3 1 1.85 0.76 27 8.65 86.04 13 4.07 No 59 0.69 No 0 0 No -23 0.52 No 47 55.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 95107106 + NM_014899 RHOBTB3 1 1.23 0.17 10 -0.45 65.76 42 4.48 No 7 0.48 No 0 0 No -31 0.57 No 39 61.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 95108208 + NM_014899 RHOBTB3 1 0.88 0.28 16 8.56 89.39 33 6.24 Yes 72 -1.91 No 0 0 No -30 0.57 No 40 64.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 95116099 + NM_014899 RHOBTB3 1 0.5 0.14 7 10.56 82.53 25 5.27 No 34 1.32 Yes 0 0 No -25 0.75 Yes 45 77.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 95126622 + NM_014899 RHOBTB3 1 0.5 0.19 11 -0.28 53.14 34 7.71 Yes 21 1.14 Yes 0 0 No -33 0.76 Yes 37 67.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 113245635 - NM_001042679 RHOC 1 0.08 0.31 16 7.11 83.79 32 8.04 Yes 19 1.66 Yes 0 0 No -31 0.67 Yes 44 70.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 113246080 - NM_001042679 RHOC 1 0.07 0.28 13 10.77 87.13 35 6.66 Yes 72 0.28 No 20 0.44 Yes -35 0.61 No 35 50.49 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 113247063 - NM_001042679 RHOC 1 0.07 0.11 8 6.93 91.04 14 5.29 No 40 1.43 Yes 23 0.74 Yes -23 0.46 No 54 49.74 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 122218587 - NM_019034 RHOF 1 1.01 2.17 62 7.23 76.89 32 5.62 Yes 55 0.49 No 0 0 No -23 0.75 Yes 47 69.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 122226602 - NM_019034 RHOF 1 0.09 0.19 11 7.23 80.14 24 4.12 No 66 1.1 Yes 0 0 No -23 0.88 Yes 47 87.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 3851879 - NM_001665 RHOG 1 0.81 1.57 56 4.19 0 35 10.14 Yes 22 1.88 Yes 0 0 No -34 0.85 Yes 36 87.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 3851883 - NM_001665 RHOG 1 0.07 0.15 11 1.21 84.41 31 9.94 Yes 18 1.9 Yes 25 0.86 Yes -30 0.85 Yes 40 87.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 46770624 + NM_012249 RHOQ 1 0.17 0.28 17 6.51 76.15 118 12 Yes 21 1.95 Yes 0 0 No -33 0.81 Yes 37 89.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30501375 + NM_001288758 RHOT1 1 0.16 0.17 10 9 84.31 31 6.83 Yes 0 1.18 Yes 0 0 No -30 0.52 No 40 53.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 30502343 + NM_001288758 RHOT1 1 0.22 0.19 14 -2.5 0 15 3.87 No 12 1.41 Yes 0 0 No -28 0.41 No 42 69.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 30504465 + NM_001288758 RHOT1 1 0.6 0.39 22 8.87 78.22 39 9.11 Yes 26 1.53 Yes 0 0 No -38 0.75 Yes 32 92.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30504863 + NM_001288758 RHOT1 1 0.16 0.11 8 4.17 84.41 37 6.86 Yes 24 1.94 Yes 0 0 No -36 0.9 Yes 34 91.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30520156 + NM_001288758 RHOT1 1 0.7 0.38 21 2.49 87.08 45 9.01 Yes 32 1.01 Yes 0 0 No -27 0.64 No 43 51.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 30528422 + NM_001288758 RHOT1 1 0.18 0.14 7 6.07 78.83 69 6.75 Yes 10 1.43 Yes 0 0 No -22 0.47 No 48 48.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 30530910 + NM_001288758 RHOT1 1 0.14 0.11 7 -1.56 84.05 25 5.57 Yes 12 0.24 No 0 0 No -24 0.92 Yes 46 84.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 30534530 + NM_001288758 RHOT1 1 1.43 1.35 50 7.62 91.84 23 4.9 No 73 -3.79 No 22 0.89 Yes -22 0.95 Yes 48 94.47 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 30535229 + NM_001288758 RHOT1 1 0.11 0.11 7 8.61 88.63 19 5.74 Yes -2 0.19 No 0 0 No -26 0.79 Yes 44 60.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 30538134 + NM_001288758 RHOT1 1 21.5 5.63 72 9.91 83.95 30 6.01 Yes 46 1.28 Yes 29 0.89 Yes -29 0.89 Yes 41 93.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 30548084 + NM_001288758 RHOT1 1 1.32 0.38 23 1.47 78.69 14 5.1 No 60 0.42 No 0 0 No -28 0.35 No 42 34.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 30548089 + NM_001288758 RHOT1 1 0.39 0.11 7 2 0 19 5.57 Yes 65 0.4 No 0 0 No -25 0.32 No 62 36.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 30538134 + NM_001288758 RHOT1 1 41.78 11.24 72 9.91 83.95 30 6.01 Yes 46 1.28 Yes 29 0.89 Yes -29 0.89 Yes 41 93.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 30548084 + NM_001288758 RHOT1 1 0.73 0.19 12 1.47 78.69 14 5.1 No 60 0.42 No 0 0 No -28 0.35 No 42 34.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 718357 + NM_138769 RHOT2 1 3.31 3.6 71 0.48 0 25 8.72 Yes 12 2.61 Yes 19 0.92 Yes -24 0.79 Yes 46 87.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 718508 + NM_138769 RHOT2 1 0.23 0.28 17 -13.74 54.21 30 4.89 No 29 -0.34 No 0 0 No -41 0.61 No 29 59.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 718658 + NM_138769 RHOT2 1 0.4 0.58 33 2.07 71.21 29 5.38 No NA NA NA 24 0.74 Yes -27 0.79 Yes 43 76.6 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 720265 + NM_138769 RHOT2 1 10.73 9.85 72 2.78 66.92 25 4.77 No 25 1.1 Yes 20 0.86 Yes -24 0.86 Yes 46 59.88 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 720695 + NM_138769 RHOT2 1 0.57 0.65 33 4.3 75.98 19 4.96 No 26 0.98 Yes 25 0.63 Yes -37 0.29 No 45 23 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 720715 + NM_138769 RHOT2 1 0.15 0.17 10 4.17 78.29 15 5.39 No 2 1.4 Yes 0 0 No -14 0.59 No 56 58.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 720888 + NM_138769 RHOT2 1 0.27 0.25 12 1.64 74.28 26 8.24 Yes 13 1.26 Yes 25 0.94 Yes -25 0.83 Yes 45 80.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 720888 + NM_138769 RHOT2 1 7.6 6.89 72 1.64 74.28 26 8.24 Yes 13 1.26 Yes 25 0.94 Yes -25 0.83 Yes 45 80.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 720924 + NM_138769 RHOT2 1 0.6 0.54 30 8.5 85.08 26 6.34 Yes 49 1.27 Yes 0 0 No -35 0.27 No 35 24.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 721114 + NM_138769 RHOT2 1 2.66 2 53 6.53 84.06 19 6.4 Yes 6 0.96 Yes 18 0.66 Yes -18 0.53 No 52 73.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 722471 + NM_138769 RHOT2 1 1.54 1.57 52 -11.57 0 13 3.46 No 72 -0.06 No 19 0.48 Yes -12 0.53 No 54 57.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 722494 + NM_138769 RHOT2 1 0.95 0.97 42 1.81 0 9 3.87 No -4 0.26 No 0 0 No -25 0.64 No 45 49.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 722975 + NM_138769 RHOT2 1 0.23 0.46 29 8.06 82.84 20 6 Yes 56 0.7 No 0 0 No -29 0.48 No 43 43.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 5657738 + NM_020829 RIC1 1 0.17 0.24 16 2.43 76.88 23 5.1 No 10 0.59 No 0 0 No -22 0.85 Yes 48 89.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 5665677 + NM_020829 RIC1 1 1.74 2.61 63 10.65 97.81 36 7.62 Yes 61 1.48 Yes 0 0 No -35 0.8 Yes 35 83.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5685072 + NM_020829 RIC1 1 0.18 0.26 16 5.31 74.19 22 5.45 No 37 1.16 Yes 0 0 No -21 0.61 No 49 65.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 5688243 + NM_020829 RIC1 1 0.15 0.24 16 5.86 79.04 49 5.98 Yes 19 1.46 Yes 0 0 No -31 0.9 Yes 39 80.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5690318 + NM_020829 RIC1 1 0.11 0.11 7 8.14 84.49 13 5.38 No 0 0.96 Yes 0 0 No -19 0.48 No 49 64.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 5710415 + NM_020829 RIC1 1 5.87 6.79 71 4.79 88.67 18 6.08 Yes 56 0.55 No 0 0 No -32 0.72 Yes 38 67.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 5712360 + NM_020829 RIC1 1 2.38 2.67 67 6.83 76.08 33 4.81 No 30 0.66 No 0 0 No -29 0.58 No 41 75.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 5713897 + NM_020829 RIC1 1 1.43 1.53 56 2.13 87.5 24 6.63 Yes 11 0.8 Yes 0 0 No -24 0.67 Yes 46 56.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 5720188 + NM_020829 RIC1 1 0.08 0.13 7 -1.19 0 12 3.9 No 8 0.64 No 0 0 No -24 0.67 Yes 46 57.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 5720616 + NM_020829 RIC1 1 9.78 21.96 72 6.68 88.12 36 7.67 Yes 23 0.76 No 0 0 No -25 0.43 No 34 52.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 5732390 + NM_020829 RIC1 1 2.16 4.75 71 3.41 84.19 24 6.06 Yes 11 1.22 Yes 0 0 No -30 0.49 No 40 59.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 5736334 + NM_020829 RIC1 1 5.57 4.92 71 6.24 74.23 33 4.84 No 20 0.77 Yes 0 0 No -32 0.61 No 38 78.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 5745401 + NM_020829 RIC1 1 0.47 0.69 34 9.12 91.41 24 4.48 No 6 0.38 No 0 0 No -23 0.87 Yes 47 89.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 5748584 + NM_020829 RIC1 1 1.82 3.89 67 9.02 80.49 32 6.8 Yes 19 1.17 Yes 31 0.81 Yes -31 0.65 No 39 70.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 5749398 + NM_020829 RIC1 1 0.56 1.21 46 6.05 88.67 23 6.15 Yes 4 1.42 Yes 0 0 No -25 0.75 Yes 45 81.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 5763724 + NM_020829 RIC1 1 0.12 0.22 15 10.64 87.14 21 4.64 No 8 1.18 Yes 0 0 No -24 0.53 No 46 74.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 5765468 + NM_020829 RIC1 1 0.29 0.6 28 5.11 80.43 35 6.08 Yes 74 -1.21 No 0 0 No -27 0.61 No 46 56.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 5772454 + NM_020829 RIC1 1 0.12 0.15 8 6.82 77.14 28 5.38 No 51 1.28 Yes 0 0 No -27 0.75 Yes 43 63.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 209174 + NM_001286134 RIC8A 1 1.71 3.03 67 4.55 78.44 24 6.07 Yes NA NA NA 23 0.64 Yes -23 0.81 Yes 47 66.21 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 209258 + NM_001286134 RIC8A 1 2.08 3.75 69 2.37 70.27 44 6.92 Yes 55 -2.91 No 27 0.75 Yes -27 0.69 Yes 43 73.06 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 209306 + NM_001286134 RIC8A 1 0.2 0.35 21 5.08 77.08 22 5.75 Yes 41 0.52 No 0 0 No -21 0.8 Yes 49 81.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 210406 + NM_001286134 RIC8A 1 0.13 0.24 14 7.42 88.58 16 5.39 No 32 0.84 Yes 25 0.66 Yes -22 0.73 Yes 48 88.62 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 210574 + NM_001286134 RIC8A 1 0.61 1.13 45 -4.38 0 31 5.92 Yes 18 0.98 Yes 26 0.96 Yes -30 0.92 Yes 40 94.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 212596 + NM_001286134 RIC8A 1 1.25 1.85 61 -4.89 0 14 4.47 No 1 0.18 No 33 0.2 Yes -36 0.38 No 57 43.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 214205 + NM_001286134 RIC8A 1 0.88 1.39 54 4.98 77.63 19 6.35 Yes 74 -2.61 No 19 0.56 Yes -18 0.54 No 52 44.83 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 214287 + NM_001286134 RIC8A 1 1.72 2.65 65 11.13 91.38 18 3.56 No 0 0.8 Yes 30 0.41 Yes -30 0.56 No 40 56.71 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 38945713 - NM_001285439 RICTOR 1 9.14 2.78 64 8.37 82.41 21 5.16 No 8 0.24 No 24 0.78 Yes -20 0.75 Yes 46 72.34 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 38966178 - NM_001285439 RICTOR 1 0.61 0.29 17 2.32 87.57 71 8.6 Yes 3 0.37 No 0 0 No -21 0.82 Yes 49 41.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 38978751 - NM_001285439 RICTOR 1 8.57 4.6 72 -2.53 78.78 36 6.3 Yes 23 0.21 No 33 0.31 Yes -36 0.38 No 34 49.93 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 38982131 - NM_001285439 RICTOR 1 0.72 0.29 18 2.54 0 11 4.12 No 12 0.56 No 0 0 No -32 0.52 No 40 51.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 38982153 - NM_001285439 RICTOR 1 0.24 0.11 7 -0.68 63.5 54 7.28 Yes 17 -3.17 No 22 0.24 Yes -25 0.54 No 45 39.79 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 39017269 - NM_001285439 RICTOR 1 2.75 1.35 55 9.35 90.7 28 5.48 No 49 0.06 No 0 0 No -25 0.36 No 45 58.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 39030675 - NM_001285439 RICTOR 1 1.62 0.43 27 11.51 80.24 35 7.16 Yes 15 1.6 Yes 0 0 No -27 0.46 No 43 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 99120942 - NM_005836 RIDA 1 0.54 0.56 28 6.18 90.24 22 4.83 No 58 0.15 No 21 0.52 Yes -21 0.41 No 49 66.49 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 99120997 - NM_005836 RIDA 1 0.21 0.22 14 -1.12 57.11 35 6.93 Yes 22 0.62 No 28 0.58 Yes -28 0.37 No 29 60.76 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 99126054 - NM_005836 RIDA 1 1.26 1.6 44 6.63 76.38 57 5.93 Yes 11 1.94 Yes 23 0.83 Yes -28 0.46 No 47 42.94 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 152273076 + NM_001177665 RIF1 1 0.1 0.14 8 -3.18 84.15 21 7.24 Yes 28 0.47 No 0 0 No -29 0.62 No 41 68.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 152285723 + NM_001177665 RIF1 1 0.22 0.31 16 3.01 0 49 6.26 Yes 33 0.49 No 0 0 No -26 0.59 No 44 40.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 152311395 + NM_001177665 RIF1 1 0.17 0.21 13 4.12 79.81 24 4.58 No 28 1.71 Yes 19 0.74 Yes -23 0.66 No 47 82.28 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 152311416 + NM_001177665 RIF1 1 0.1 0.13 7 1.22 0 11 4.12 No 49 1.69 Yes 0 0 No -27 0.83 Yes 43 88.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 152314278 + NM_001177665 RIF1 1 1.13 1.79 58 2.21 0 48 6.92 Yes 35 0.24 No 0 0 No -41 0.78 Yes 29 76.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 152318745 + NM_001177665 RIF1 1 0.33 0.63 26 1.06 75.51 13 3.39 No 31 0.64 No 18 0.82 Yes -43 0.84 Yes 27 54.71 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 152322367 + NM_001177665 RIF1 1 2.41 3.89 69 4.19 86.66 22 4.69 No 9 0.56 No 0 0 No -21 0.86 Yes 49 84.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 152324535 + NM_001177665 RIF1 1 0.21 0.39 19 11.81 90.38 25 5.57 Yes 24 2.15 Yes 0 0 No -24 0.85 Yes 46 89.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 152324987 + NM_001177665 RIF1 1 81.22 79.56 72 8.94 83.41 32 6.16 Yes 19 1.55 Yes 31 0.93 Yes -31 0.92 Yes 39 93.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 152325161 + NM_001177665 RIF1 1 0.16 0.14 9 -0.46 0 16 3.82 No 30 1.32 Yes 0 0 No -31 0.71 Yes 39 78.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 152325567 + NM_001177665 RIF1 1 0.36 0.56 30 9.05 89.53 34 4.87 No 63 0.44 No 0 0 No -33 0.66 No 37 60.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 152329369 + NM_001177665 RIF1 1 0.25 0.35 20 8.85 88.97 32 7.2 Yes 19 0.84 Yes 0 0 No -31 0.91 Yes 39 87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 152331372 + NM_001177665 RIF1 1 0.08 0.13 8 -6.74 0 29 6.45 Yes 64 0.46 No 0 0 No -28 0.83 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 123901653 - NR_130703 RILPL2 1 0.05 0.24 10 5.23 87.27 28 5.74 Yes 33 1.04 Yes 0 0 No -27 0.59 No 43 50.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 123905503 - NR_130703 RILPL2 1 0.05 0.22 10 2.59 85.63 19 4.69 No 26 0.64 No 0 0 No -18 0.89 Yes 52 85.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123915138 - NR_130703 RILPL2 1 1.89 0.63 31 9.03 91.72 34 5.94 Yes 21 0.58 No 0 0 No -23 0.56 No 47 74.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 123915207 - NR_130703 RILPL2 1 1055.06 301.79 72 11.15 97.56 23 5.29 No 50 -2.82 No 23 0.65 Yes -23 0.76 Yes 47 74.25 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 92981507 + NM_024832 RIN3 1 5.64 0.46 24 7.1 80.9 39 6.69 Yes 26 1.71 Yes 38 0.73 Yes -38 0.83 Yes 32 86.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 93052791 + NM_024832 RIN3 1 4.02 1.04 38 10.42 90.88 29 5.47 No 16 1.13 Yes 28 0.73 Yes -28 0.7 Yes 45 53.43 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 93081729 + NM_024832 RIN3 1 2.39 0.69 31 2.7 84.71 12 5.2 No -1 0.75 No 28 0.93 Yes -47 0.41 No 59 45.44 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 93083842 + NM_024832 RIN3 1 1.25 0.39 23 6.97 88.66 22 4.77 No 9 0.78 Yes 0 0 No -21 0.94 Yes 49 96.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 93110769 + NM_024832 RIN3 1 8.91 1.74 56 9.26 89.4 36 6 Yes 23 0.46 No 26 0.5 Yes -23 0.72 Yes 47 83.45 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 93125508 + NM_024832 RIN3 1 0.24 0.15 10 -4.54 69.49 30 7.75 Yes 17 1.9 Yes 0 0 No -29 0.96 Yes 41 95.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 93132840 + NM_024832 RIN3 1 0.15 0.14 8 4.43 0 29 5.92 Yes 69 -2.92 No 0 0 No -28 0.82 Yes 42 85.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 93142877 + NM_024832 RIN3 1 0.5 0.42 19 7.5 73.96 38 7.87 Yes 75 1.27 Yes 20 0.66 Yes -20 0.82 Yes 50 95.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 93152957 + NM_024832 RIN3 1 3.18 1.32 49 9.43 82.98 32 6.16 Yes NA NA NA 0 0 No -27 0.73 Yes 43 75.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 93154030 + NM_024832 RIN3 1 1.34 0.51 25 8.94 92.01 28 5.69 Yes 56 -2.67 No 22 0.37 Yes -22 0.38 No 48 52.87 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 39358921 - NM_198445 RINL 1 1.18 0.79 37 4.83 78.75 36 7.74 Yes 55 1 Yes 0 0 No -35 0.69 Yes 35 89.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39361626 - NM_198445 RINL 1 0.17 0.24 12 2.9 0 16 4 No 3 1.23 Yes 0 0 No -27 0.44 No 43 51.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39362959 - NM_198445 RINL 1 0.11 0.14 9 5.24 80.12 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.69 Yes 51 86.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39363704 - NM_198445 RINL 1 0.39 0.49 24 10.77 87.74 26 6.79 Yes 54 1.55 Yes 0 0 No -25 0.93 Yes 45 96.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39367420 - NM_198445 RINL 1 0.38 0.22 14 -2.24 76.38 20 5.45 No 7 1.28 Yes 0 0 No -25 0.78 Yes 45 73.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105176018 + NM_021930 RINT1 1 0.45 0.28 17 7.24 83.78 34 7.37 Yes 49 1.17 Yes 33 0.71 Yes -33 0.83 Yes 37 70.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 105177104 + NM_021930 RINT1 1 0.38 0.22 14 6.45 74.49 37 5.86 Yes 18 1.27 Yes 30 0.8 Yes -30 0.74 Yes 40 78.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 105182248 + NM_021930 RINT1 1 0.58 0.42 24 -0.09 0 18 4 No 34 0.44 No 0 0 No -26 0.74 Yes 44 42.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105182938 + NM_021930 RINT1 1 0.53 0.39 24 2.59 77.88 20 4.87 No 74 -4.73 No 19 0.6 Yes -19 0.74 Yes 51 68.44 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 105187326 + NM_021930 RINT1 1 0.25 0.26 13 2.16 75.36 18 4.9 No 5 0.2 No 35 0.17 Yes -17 0.61 No 53 39.13 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 105188995 + NM_021930 RINT1 1 4.25 3.86 66 -1.07 0 25 6.63 Yes 12 0.78 Yes 29 0.76 Yes -10 0.66 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 105189002 + NM_021930 RINT1 1 1.17 1.08 50 -5.08 69.33 32 7.14 Yes 19 0.73 No 0 0 No -31 0.55 No 39 54.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105189275 + NM_021930 RINT1 1 0.32 0.19 11 9.37 88.92 33 7.09 Yes 20 2.19 Yes 0 0 No -32 0.77 Yes 38 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105190505 + NM_021930 RINT1 1 2.71 1.67 60 3.64 0 40 6.3 Yes 44 1.25 Yes 0 0 No -27 0.63 No 35 68.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105195498 + NM_021930 RINT1 1 0.33 0.39 25 6.8 79.29 16 5.38 No 25 1.15 Yes 0 0 No -26 0.45 No 20 37.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105198913 + NM_021930 RINT1 1 0.16 0.17 11 4.47 80.83 38 6.85 Yes 38 1.35 Yes 0 0 No -37 0.31 No 42 31.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105200570 + NM_021930 RINT1 1 0.24 0.22 15 1.56 0 34 6.22 Yes 21 0.49 No 0 0 No -33 0.78 Yes 37 82.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105206004 + NM_021930 RINT1 1 0.16 0.13 8 0.54 75.37 26 5.53 No 13 0.24 No 0 0 No -30 0.5 No 40 63.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 7392949 + NM_031480 RIOK1 1 0.46 0.17 9 11.43 93.89 38 6.63 Yes 37 0.76 No 0 0 No -40 0.57 No 34 70.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 7395239 + NM_031480 RIOK1 1 0.18 0.24 17 3.69 66.23 25 5.13 No 75 1.56 Yes 28 0.43 Yes -24 0.71 Yes 46 53.88 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 7395253 + NM_031480 RIOK1 1 3.09 3.99 70 6.91 92.45 23 4.75 No 72 0.02 No 28 0.43 Yes -22 0.56 No 49 56.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 7404635 + NM_031480 RIOK1 1 0.38 0.58 27 4.76 79.47 39 5.46 No 0 0.18 No 22 0.86 Yes -32 0.42 No 38 57.04 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 7405128 + NM_031480 RIOK1 1 0.24 0.18 11 3.62 75.78 15 4.65 No 61 0.68 No 26 0.74 Yes -20 0.45 No 50 58.18 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 7414486 + NM_031480 RIOK1 1 1.76 1.31 51 3.61 74.1 25 5 No 28 0.74 No 0 0 No -24 0.59 No 46 64.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 96511020 - NM_001159749 RIOK2 1 0.74 0.92 38 7.65 78.21 22 4.52 No -2 0.02 No 0 0 No -24 0.74 Yes 46 67.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 21043978 + NM_003831 RIOK3 1 0.2 0.32 20 1.69 79.66 27 5.24 No 28 0.76 No 26 0.79 Yes -26 0.7 Yes 44 72.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 21044199 + NM_003831 RIOK3 1 0.38 0.86 44 -0.56 56.17 33 5.41 No 38 0.33 No 0 0 No -33 0.5 No 37 75.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 21057120 + NM_003831 RIOK3 1 0.22 0.47 21 0.73 66.58 25 4.01 No 39 -3.94 No 27 0.71 Yes -29 0.42 No 41 48.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr18 21059289 + NM_003831 RIOK3 1 0.08 0.13 8 1.48 0 15 4.24 No 33 2.15 Yes 23 0.93 Yes -32 0.75 Yes 38 69.32 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr18 21061139 + NM_003831 RIOK3 1 0.69 1.17 49 -1.27 0 35 7 Yes 53 0.21 No 0 0 No -34 0.65 No 36 65.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 97668857 - NM_001042533 RIOX2 1 31.6 23.61 72 8.04 90 20 5.74 Yes 7 1.34 Yes 23 0.37 Yes -19 0.86 Yes 51 91.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 97670506 - NM_001042533 RIOX2 1 0.58 0.54 28 4.48 78.42 34 4.75 No 45 0.67 No 0 0 No -27 0.84 Yes 43 90.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 97671097 - NM_001042533 RIOX2 1 0.29 0.29 15 7.5 77.55 18 6.08 Yes 5 1.32 Yes 23 0.6 Yes -17 0.67 Yes 53 62.36 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 97678009 - NM_001042533 RIOX2 1 0.21 0.26 14 7.4 90.42 18 4.9 No 75 0.5 No 0 0 No -42 0.63 No 28 81.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 97690625 - NM_001042533 RIOX2 1 4.53 0.28 14 6.84 93.08 26 4.97 No -1 0.96 Yes 0 0 No -25 0.9 Yes 45 87.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 3090891 + NM_001317061 RIPK1 1 0.62 0.21 13 5.7 76.31 35 5.71 Yes 13 0.48 No 0 0 No -25 0.81 Yes 45 78.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 3105721 + NM_001317061 RIPK1 1 0.55 0.24 14 2.4 0 9 3.87 No 15 1.35 Yes 0 0 No -27 0.76 Yes 43 87.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90771549 + NM_003821 RIPK2 1 3.31 1.15 44 8.94 95.76 30 5.74 Yes 17 0.25 No 29 0.89 Yes -29 0.78 Yes 41 68.3 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 90779202 + NM_003821 RIPK2 1 0.23 0.26 13 10.32 89.67 29 5.74 Yes 1 0.33 No 0 0 No -26 0.7 Yes 42 78.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90784914 + NM_003821 RIPK2 1 0.22 0.25 17 7.92 85.13 25 5.18 No 35 0.89 Yes 0 0 No -24 0.9 Yes 46 82.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155874290 - NM_001256820 RIT1 1 0.42 0.29 15 3.43 0 23 6.61 Yes 10 1.7 Yes 0 0 No -28 0.47 No 42 50.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155874290 - NM_001256820 RIT1 1 0.16 0.13 7 3.43 0 23 6.61 Yes 10 1.7 Yes 0 0 No -28 0.47 No 42 50.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155874593 - NM_001256820 RIT1 1 0.18 0.14 8 2.71 71.32 36 5.87 Yes 23 0.39 No 0 0 No -30 0.75 Yes 40 72.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 113623997 + NM_032848 RITA1 1 4.7 3.47 65 4.65 0 11 4.12 No 19 0.68 No 23 0.89 Yes -24 0.67 Yes 39 68.89 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 40667599 + NM_012421 RLF 1 4.87 2.18 61 8.89 92.17 26 5.29 No 13 0.73 No 0 0 No -25 0.93 Yes 45 94.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 40677313 + NM_012421 RLF 1 0.63 0.22 14 3.81 83.69 39 6.15 Yes 26 1.1 Yes 0 0 No -35 0.63 No 35 69.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 40688967 + NM_012421 RLF 1 0.74 0.18 13 7.03 77.17 47 5.55 No 8 1.27 Yes 0 0 No -20 0.82 Yes 50 77.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 73812936 - NM_183353 RLIM 1 0.46 0.28 17 1.79 75.31 25 5.13 No 7 0.33 No 44 0.4 Yes -24 0.9 Yes 46 91.77 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 73815854 - NM_183353 RLIM 1 1.53 0.15 10 1.86 0 21 5.57 Yes 8 1.63 Yes 26 0.61 Yes -26 0.65 No 44 76.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chrX 73832474 - NM_183353 RLIM 1 1.22 0.17 10 2.19 0 27 6.22 Yes 14 0.96 Yes 0 0 No -26 0.72 Yes 44 83.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 87484709 - NM_016033 RMDN1 1 5.9 7.43 48 8.8 91.79 16 5.81 Yes 3 0.8 Yes 28 0.72 Yes -23 0.5 No 47 61.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 87484709 - NM_016033 RMDN1 1 0.46 0.6 30 8.8 91.79 16 5.81 Yes 3 0.8 Yes 28 0.72 Yes -23 0.5 No 47 61.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 87484709 - NM_016033 RMDN1 1 0.22 0.26 12 8.8 91.79 16 5.81 Yes 3 0.8 Yes 28 0.72 Yes -23 0.5 No 47 61.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 87486887 - NM_016033 RMDN1 1 0.24 0.32 18 9.43 84.27 21 5.63 Yes 8 1.19 Yes 24 0.82 Yes -24 0.72 Yes 46 48.72 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 87487144 - NM_016033 RMDN1 1 11.11 23.15 72 6.81 87.42 12 5.38 No 54 0.91 Yes 22 0.68 Yes -22 0.85 Yes 48 85.33 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 87487826 - NM_016033 RMDN1 1 1.54 3.36 69 8.7 91.2 31 5.68 Yes 18 0.64 No 0 0 No -30 0.82 Yes 40 92.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 87495267 - NM_016033 RMDN1 1 0.07 0.17 11 2.34 71.9 30 5.35 No 3 1.01 Yes 0 0 No -29 0.63 No 41 77.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 87497651 - NM_016033 RMDN1 1 0.12 0.17 11 10.38 87.07 33 6.24 Yes 20 1.24 Yes 0 0 No -32 0.79 Yes 38 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 87507196 - NM_016033 RMDN1 1 1.01 1.99 58 1.66 0 36 6.38 Yes 76 0.36 No 35 0.54 Yes -30 0.68 Yes 40 79.16 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 87507200 - NM_016033 RMDN1 1 0.14 0.24 15 -0.68 83.57 32 6.09 Yes 72 0.36 No 35 0.54 Yes -26 0.71 Yes 44 78.65 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 87517609 - NM_016033 RMDN1 1 0.4 0.74 33 8.62 74.46 26 7.26 Yes 13 1.08 Yes 25 0.92 Yes -25 0.93 Yes 45 95.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 87520401 - NM_016033 RMDN1 1 0.54 0.67 33 8.96 88.09 28 6.48 Yes 15 1.09 Yes 0 0 No -27 0.91 Yes 43 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41043869 - NM_001323894 RMDN3 1 0.61 0.4 20 6.21 82.05 21 5.2 No 76 1.78 Yes 20 0.84 Yes -20 0.9 Yes 50 93.26 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 86603243 + NM_024945 RMI1 1 8.79 1.64 57 9.05 86.76 33 7.04 Yes 20 1.67 Yes 0 0 No -32 0.62 No 38 90.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 86609959 + NM_024945 RMI1 1 0.49 0.1 7 3.35 80.97 22 4.02 No 2 0.35 No 0 0 No -26 0.34 No 19 50.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 86615872 + NM_024945 RMI1 1 0.41 0.19 12 -1.46 0 10 4 No 19 0.97 Yes 0 0 No -31 0.46 No 30 44.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 86616165 + NM_024945 RMI1 1 0.3 0.15 7 6.47 91.41 22 5.88 Yes 74 0.46 No 0 0 No -21 0.7 Yes 49 54.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 151730036 - NM_017909 RMND1 1 1.13 0.9 40 9.12 86.13 31 5.86 Yes 0 0.76 No 0 0 No -30 0.6 No 40 79.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 151732792 - NM_017909 RMND1 1 0.16 0.14 10 8.51 81.46 42 8.47 Yes 29 1.3 Yes 0 0 No -34 0.61 No 29 49.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 151739715 - NM_017909 RMND1 1 0.2 0.15 11 4.83 86.26 43 3.99 No 14 0.21 No 0 0 No -36 0.79 Yes 34 73.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 177569633 + NM_001288794 RMND5B 1 1.4 0.82 41 5.37 72.6 29 5.83 Yes 16 1.15 Yes 28 0.88 Yes -28 0.94 Yes 42 96.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 177569886 + NM_001288794 RMND5B 1 0.42 0.31 17 6.03 76.97 22 5.27 No 51 0.35 No 0 0 No -21 0.86 Yes 49 77.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 177573116 + NM_001288794 RMND5B 1 0.26 0.17 11 -4.33 72.71 29 5.92 Yes 16 1.46 Yes 0 0 No -28 0.84 Yes 42 91.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 3593431 - NM_002936 RNASEH1 1 1.36 2.24 62 3.13 77 36 6.31 Yes 75 0.35 No 0 0 No -35 0.68 Yes 35 66.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 3596311 - NM_002936 RNASEH1 1 5.41 7.57 72 1 0 27 6.24 Yes 14 0.4 No 0 0 No -23 0.54 No 47 60.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 3599048 - NM_002936 RNASEH1 1 0.25 0.19 9 1.72 66.63 33 5.77 Yes 5 -2.3 No 0 0 No -30 0.32 No 42 42.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 3603024 - NM_002936 RNASEH1 1 0.07 0.11 7 9.21 77.94 39 4.26 No 26 1.57 Yes 0 0 No -20 0.54 No 36 74.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 3603753 - NM_002936 RNASEH1 1 0.24 0.35 18 2.55 0 32 5.44 No 19 1.13 Yes 0 0 No -31 0.73 Yes 39 60.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 3605434 - NM_002936 RNASEH1 1 0.23 0.29 15 7.82 86.66 37 6.42 Yes 24 1.06 Yes 20 0.63 Yes -20 0.44 No 50 52.83 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 12918359 + NM_006397 RNASEH2A 1 0.2 0.42 19 5.8 89.01 32 5.65 Yes 19 0.75 No 0 0 No -31 0.84 Yes 39 80.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 12924152 + NM_006397 RNASEH2A 1 0.07 0.13 8 -12.33 0 16 4 No 23 0.98 Yes 0 0 No -35 0.78 Yes 35 77.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 51503596 + NM_024570 RNASEH2B 1 1.01 1.9 59 -4.15 0 23 6.99 Yes 74 -2.92 No 29 0.69 Yes -15 0.35 No 55 49.31 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 51503648 + NM_024570 RNASEH2B 1 0.24 0.44 25 6.3 80.49 24 6.11 Yes 30 0.17 No 0 0 No -23 0.79 Yes 47 75.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 51503651 + NM_024570 RNASEH2B 1 0.1 0.18 11 4.26 77.48 27 6.35 Yes 33 0.18 No 0 0 No -26 0.81 Yes 44 74.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 51515985 + NM_024570 RNASEH2B 1 0.75 1.58 60 5.8 83.8 41 8.87 Yes 28 1.65 Yes 0 0 No -27 0.53 No 30 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 51517465 + NM_024570 RNASEH2B 1 0.29 0.57 26 -2.16 0 12 4.08 No 17 1.45 Yes 0 0 No -29 0.65 No 41 81.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 51521149 + NM_024570 RNASEH2B 1 0.16 0.39 24 3.24 90.49 19 4.63 No 44 1.07 Yes 0 0 No -22 0.88 Yes 48 86.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 51522124 + NM_024570 RNASEH2B 1 0.04 0.11 7 4.46 84.82 51 8.33 Yes 38 1.2 Yes 0 0 No -25 0.44 No 26 76.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 51524161 + NM_024570 RNASEH2B 1 1.41 2.5 65 9.02 91.61 32 5.57 Yes 28 0.97 Yes 0 0 No -31 0.49 No 40 67.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 51524175 + NM_024570 RNASEH2B 1 0.06 0.1 7 4.14 77.66 23 4.72 No 42 0.97 Yes 22 0.84 Yes -22 0.78 Yes 48 61.8 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 51524206 + NM_024570 RNASEH2B 1 1.12 1.78 55 8.11 83.56 10 5.39 No 73 0.97 Yes 22 0.84 Yes -22 0.91 Yes 48 94.25 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 65487302 - NM_032193 RNASEH2C 1 0.05 0.17 8 -1.06 0 14 4.12 No 51 0.58 No 26 0.76 Yes -13 0.78 Yes 57 63.79 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 6917451 + NR_037715 RNASEK 1 0.02 0.17 10 -3.65 0 16 4.46 No 3 1.61 Yes 27 0.94 Yes -22 0.72 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 6918685 + NR_037717 RNASEK-C17orf49 1 0.86 1.36 44 4.84 83.23 25 4.82 No 67 -4.87 No 0 0 No -22 0.67 Yes 48 67.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 6918923 + NR_037717 RNASEK-C17orf49 1 0.11 0.18 9 9.83 85.29 53 6.59 Yes 23 0.51 No 0 0 No -25 0.71 Yes 45 65.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 182549143 - NM_021133 RNASEL 1 12.65 2.39 61 8.74 91.11 16 4.27 No 11 0.67 No 23 0.88 Yes -23 0.9 Yes 47 89.96 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 182550484 - NM_021133 RNASEL 1 1.42 0.28 16 0.29 0 18 4.24 No 73 1.71 Yes 0 0 No -17 0.62 No 53 68.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 167346473 - NM_003730 RNASET2 1 0.02 0.11 7 8.37 81.61 41 5.12 No 51 1.13 Yes 0 0 No -23 0.83 Yes 47 91.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 167347402 - NM_003730 RNASET2 1 0.21 0.92 40 1.95 67.83 45 6.61 Yes 32 0.3 No 34 0.71 Yes -34 0.53 No 27 55.43 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 167347623 - NM_003730 RNASET2 1 0.06 0.21 11 -21.6 0 26 6.08 Yes 13 1.56 Yes 0 0 No -25 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 167347940 - NM_003730 RNASET2 1 0.15 0.53 26 6.35 84.8 22 5.62 Yes 68 1.02 Yes 0 0 No -26 0.55 No 49 48.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 167351171 - NM_003730 RNASET2 1 0.1 0.38 22 1.55 55.61 42 6.48 Yes 29 2.13 Yes 0 0 No -41 0.81 Yes 29 89.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 167353961 - NM_003730 RNASET2 1 0.11 0.39 23 10.68 88.75 23 6.17 Yes 10 0.94 Yes 0 0 No -28 0.46 No 42 54.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 167356565 - NM_003730 RNASET2 1 0.04 0.17 10 2.37 80.13 22 4.69 No 9 0.37 No 0 0 No -21 0.73 Yes 49 69.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 167357604 - NM_003730 RNASET2 1 0.05 0.21 14 8.25 84.42 27 7.77 Yes 14 1.51 Yes 0 0 No -30 0.54 No 44 61.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 167362113 - NM_003730 RNASET2 1 0.03 0.11 7 -10.64 0 28 5.03 No 67 1.02 Yes 0 0 No -30 0.72 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 167365646 - NM_003730 RNASET2 1 0.15 0.5 9 8.75 81.58 28 5.48 No 15 0.75 No 0 0 No -27 0.89 Yes 43 89.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 167369116 - NM_003730 RNASET2 1 1.51 2.68 63 5.43 78.67 34 5.04 No -3 0.13 No 26 0.71 Yes -20 0.81 Yes 50 77.89 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 120977170 + NM_001330474 RNF10 1 3.05 4.89 72 10.13 89.86 29 8.09 Yes 16 1.62 Yes 28 0.82 Yes -28 0.78 Yes 42 90.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120990305 + NM_001330474 RNF10 1 0.09 0.18 12 1.74 0 26 7.35 Yes 13 1.53 Yes 0 0 No -25 0.71 Yes 45 84.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120991732 + NM_001330474 RNF10 1 0.16 0.46 22 6.97 89.54 39 5.56 Yes 72 1.68 Yes 38 0.7 Yes -38 0.91 Yes 32 86.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120995142 + NM_001330474 RNF10 1 0.1 0.32 16 5.56 81.08 43 6.7 Yes 72 0.16 No 0 0 No -26 0.51 No 35 57.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 121001149 + NM_001330474 RNF10 1 1218.39 252.94 72 1.72 84.49 22 4.68 No 5 -1.46 No 26 0.55 Yes -21 0.73 Yes 49 75.02 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 121001243 + NM_001330474 RNF10 1 1 0.18 11 7.23 77.65 26 5.66 Yes 51 -0.68 No 23 0.53 Yes -23 0.6 No 47 65.13 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 121001618 + NM_001330474 RNF10 1 0.27 0.6 30 -3.32 0 9 3.87 No 14 0.36 No 20 0.9 Yes -26 0.88 Yes 44 92.07 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 121008974 + NM_001330474 RNF10 1 0.43 1.04 38 1.36 65.72 35 6.22 Yes 39 1.55 Yes 24 0.81 Yes -51 0.36 No 12 42.25 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 121012270 + NM_001330474 RNF10 1 0.15 0.26 16 10.76 96.61 19 5.95 Yes 6 1.17 Yes 18 0.49 Yes -18 0.52 No 43 55.19 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 121009892 + NM_001330474 RNF10 1 0.08 0.14 10 5.86 77.27 33 6.08 Yes 20 1.31 Yes 0 0 No -32 0.89 Yes 38 95.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121012270 + NM_001330474 RNF10 1 0.85 1.47 53 10.76 96.61 19 5.95 Yes 6 1.17 Yes 18 0.49 Yes -18 0.52 No 43 55.19 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 121013572 + NM_001330474 RNF10 1 0.1 0.26 14 0.45 0 20 4.32 No 49 0.08 No 26 0.66 Yes -20 0.64 No 50 61.53 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 121013916 + NM_001330474 RNF10 1 0.1 0.21 12 3.56 77.5 22 6.42 Yes 62 0.98 Yes 0 0 No -30 0.38 No 40 56.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 121014395 + NM_001330474 RNF10 1 0.99 2.1 60 3.51 75.21 30 5.05 No 17 0.59 No 0 0 No -29 0.62 No 41 75.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 51716896 + NM_014372 RNF11 1 0.17 0.17 9 4.64 81.66 24 6.08 Yes 11 0.97 Yes 0 0 No -27 0.4 No 43 54.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 51722786 + NM_014372 RNF11 1 0.15 0.17 9 10.15 87.52 37 6.4 Yes 24 0.54 No 0 0 No -36 0.92 Yes 34 93.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 51731548 + NM_014372 RNF11 1 0.18 0.17 10 10.6 94.37 31 6.98 Yes 45 1.04 Yes 0 0 No -30 0.8 Yes 40 96.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 59329749 + NM_001270530 RNF111 1 0.18 0.17 11 4.24 72.63 17 5.6 Yes 65 0.31 No 0 0 No -25 0.4 No 43 67.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59335378 + NM_001270530 RNF111 1 0.61 0.6 28 4.19 0 24 5.83 Yes 11 0.91 Yes 0 0 No -23 0.61 No 47 48.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 59342487 + NM_001270530 RNF111 1 0.36 0.38 21 9.24 86.33 29 6.92 Yes 16 0.3 No 0 0 No -20 0.79 Yes 50 67.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 59368155 + NM_001270530 RNF111 1 42.67 18.86 72 7.83 97.31 27 6.16 Yes 55 -3.72 No 0 0 No -22 0.33 No 48 61.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59376300 + NM_001270530 RNF111 1 33.6 10.79 72 4.7 83.05 24 6.07 Yes 71 0.84 Yes 23 0.73 Yes -23 0.86 Yes 47 87.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 59384735 + NM_001270530 RNF111 1 264.44 63.96 72 5.03 84.48 30 4.65 No 32 1.05 Yes 29 0.92 Yes -29 0.65 No 41 73.17 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 48558119 + NM_018683 RNF114 1 0.17 0.18 10 9.19 85.43 25 5.57 Yes 73 0.89 Yes 0 0 No -24 0.65 No 46 85.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 145615660 + NM_014455 RNF115 1 0.55 0.47 27 1.96 0 40 6.14 Yes 27 1.12 Yes 0 0 No -39 0.47 No 31 55.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 145640882 + NM_014455 RNF115 1 5.71 4.96 72 8.99 95.65 28 5.42 No 37 0.81 Yes 0 0 No -28 0.72 Yes 42 64.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 145646278 + NM_014455 RNF115 1 1.31 1.68 60 4.62 86.66 38 5.23 No 71 0.15 No 28 0.61 Yes -37 0.51 No 42 47.02 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 145648015 + NM_014455 RNF115 1 1.57 2.06 58 5.21 80.5 26 6.08 Yes 13 0.88 Yes 25 0.76 Yes -25 0.88 Yes 45 87.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 145650490 + NM_014455 RNF115 1 0.19 0.25 15 6.24 0 11 4.12 No 13 1.48 Yes 0 0 No -25 0.94 Yes 45 88.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 145650827 + NM_014455 RNF115 1 0.21 0.29 17 5.28 81.2 35 6.74 Yes 22 0.83 Yes 0 0 No -34 0.89 Yes 36 87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 145686209 + NM_014455 RNF115 1 0.12 0.17 10 3.01 0 27 5.24 No 11 0.79 Yes 0 0 No -26 0.91 Yes 44 87.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 145686977 + NM_014455 RNF115 1 0.16 0.25 15 -14.19 0 26 5.42 No 13 0.05 No 0 0 No -26 0.85 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 71646350 + NM_018320 RNF121 1 0.31 0.18 9 8.3 81.67 38 3.72 No 30 0.67 No 0 0 No -23 0.69 Yes 47 79.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 71673197 + NM_018320 RNF121 1 4.05 3.35 65 5.12 85.02 23 6.39 Yes 10 1.79 Yes 22 0.91 Yes -22 0.63 No 48 78.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 71680633 + NM_018320 RNF121 1 0.3 0.26 16 2.18 0 33 7.04 Yes 69 0.71 No 0 0 No -32 0.55 No 38 61.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71686064 + NM_018320 RNF121 1 0.25 0.22 12 5.45 78.09 16 5.39 No 69 1.64 Yes 0 0 No -25 0.59 No 51 63.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 71689131 + NM_018320 RNF121 1 1.36 1.15 47 6.88 85.05 32 6.78 Yes 19 0.51 No 31 0.64 Yes -31 0.84 Yes 39 76.94 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 71693824 + NM_018320 RNF121 1 0.23 0.21 12 6.25 84.86 13 5.19 No 0 1.85 Yes 30 0.58 Yes -41 0.56 No 50 56.03 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 71693852 + NM_018320 RNF121 1 1.98 1.64 54 8.28 83.76 31 6.08 Yes 28 1.83 Yes 30 0.58 Yes -30 0.74 Yes 40 71.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 71694654 + NM_018320 RNF121 1 1.02 0.94 49 5.62 80.19 23 5.69 Yes 40 0.77 No 0 0 No -22 0.61 No 48 67.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71694702 + NM_018320 RNF121 1 0.35 0.33 19 3.56 81 20 4.44 No 41 0.25 No 24 0.81 Yes -24 0.74 Yes 42 43.29 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 71699937 + NM_018320 RNF121 1 0.76 0.82 37 8.76 89.9 20 5.72 Yes 7 0.96 Yes 0 0 No -19 0.8 Yes 51 91.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 71706394 + NM_018320 RNF121 1 0.12 0.13 7 3.49 73.66 29 5.39 No 29 -3.15 No 0 0 No -26 0.63 No 44 54.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 71706485 + NM_018320 RNF121 1 1.91 2.24 64 6.78 83.81 19 6.56 Yes 6 1.66 Yes 18 0.78 Yes -18 0.74 Yes 52 89.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 71707247 + NM_018320 RNF121 1 0.17 0.25 12 -19.71 0 12 4 No -1 0.82 Yes 0 0 No -38 0.52 No 32 86.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 33407008 - NM_024787 RNF122 1 1.42 0.32 15 7.32 84.96 30 6.63 Yes 17 1.51 Yes 0 0 No -29 0.96 Yes 41 97.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 33411715 - NM_024787 RNF122 1 0.68 0.13 9 7.37 85.04 22 5.1 No 51 0.97 Yes 0 0 No -29 0.42 No 41 52.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49728868 + NR_135218 RNF123 1 0.49 0.19 10 -0.27 0 14 4.47 No 38 1.18 Yes 0 0 No -50 0.82 Yes 20 81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49734558 + NR_135218 RNF123 1 0.87 0.33 22 2.81 73.09 29 5.38 No 50 -3.86 No 19 0.26 Yes -28 0.77 Yes 42 81.57 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 49735474 + NR_135218 RNF123 1 0.29 0.14 8 2.37 70.86 38 6.16 Yes 45 -2.67 No 18 0.13 Yes -31 0.45 No 39 46.61 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 49735762 + NR_135218 RNF123 1 2.79 0.9 38 11.15 86.6 15 5.19 No 74 1.57 Yes 0 0 No -28 0.91 Yes 42 95.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49736908 + NR_135218 RNF123 1 0.45 0.11 8 1.85 70.87 19 5.26 No 6 0.75 No 0 0 No -19 0.68 Yes 51 64.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 49736904 + NR_135218 RNF123 1 4.8 1.5 55 -7.01 0 31 4.62 No 2 0.78 Yes 0 0 No -14 0.71 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 49738965 + NR_135218 RNF123 1 1.49 0.51 18 -7.68 72.09 38 7.14 Yes 41 0.48 No 0 0 No -30 0.56 No 33 60.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 49740572 + NR_135218 RNF123 1 0.89 0.36 20 3.95 76.66 31 6.43 Yes 18 -1.01 No 0 0 No -30 0.8 Yes 40 89.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49740840 + NR_135218 RNF123 1 0.34 0.14 10 -0.25 57.43 14 6.48 Yes 1 0.54 No 21 0.61 Yes -13 0.45 No 57 70.09 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 49742514 + NR_135218 RNF123 1 1.75 0.54 28 1.65 74.35 14 4.98 No 26 0.66 No 18 0.38 Yes -38 0.67 Yes 52 39.83 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 49743332 + NR_135218 RNF123 1 0.4 0.11 7 0.53 76.76 19 5 No 52 -3.38 No 0 0 No -18 0.44 No 52 47.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 49758387 + NR_135218 RNF123 1 0.83 0.22 12 7.34 81.23 24 6.78 Yes 45 -2.1 No 0 0 No -23 0.5 No 47 51.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 648270 - NM_194460 RNF126 1 0.18 0.29 19 -4.62 0 15 4.06 No 36 2.61 Yes 0 0 No -48 0.92 Yes 22 92.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 649053 - NM_194460 RNF126 1 2.75 3.07 68 9.48 88.22 25 5.75 Yes 57 0.93 Yes 0 0 No -23 0.52 No 47 45.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 651751 - NM_194460 RNF126 1 0.23 0.28 16 5.46 77.71 22 5.97 Yes 26 0.58 No 0 0 No -27 0.39 No 49 43.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 651785 - NM_194460 RNF126 1 0.11 0.17 10 3.65 76.99 35 5.92 Yes 38 -0.14 No 30 0.34 Yes -30 0.31 No 40 47.26 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 651823 - NM_194460 RNF126 1 1.21 1.69 56 7.97 81.02 13 5.47 No 42 0.91 Yes 26 0.78 Yes -23 0.46 No 48 65.17 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 651916 - NM_194460 RNF126 1 0.53 0.78 34 8.9 79.49 43 6.78 Yes NA NA NA 37 0.22 Yes -39 0.42 No 31 74.34 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 652265 - NM_194460 RNF126 1 0.14 0.21 14 8.49 79.22 13 5.6 Yes 39 2.38 Yes 0 0 No -28 0.43 No 19 39.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 661440 - NM_194460 RNF126 1 0.24 0.25 15 9.53 89.75 29 4.7 No 16 1.47 Yes 39 0.08 Yes -28 0.86 Yes 42 86.75 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 149531711 + NM_183381 RNF13 1 5.82 4.42 70 3.47 82.35 13 5.91 Yes 0 0.95 Yes 30 0.83 Yes -20 0.8 Yes 50 80.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 149531886 + NM_183381 RNF13 1 0.58 0.4 18 5.74 81.07 30 4.58 No 58 0.74 No 0 0 No -30 0.3 No 37 41.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 149540304 + NM_183381 RNF13 1 0.28 0.22 13 2.61 69.98 34 5.77 Yes 37 1.27 Yes 33 0.74 Yes -33 0.64 No 37 81.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 149564134 + NM_183381 RNF13 1 0.11 0.15 10 5.86 90.69 28 5.8 Yes 48 0.61 No 0 0 No -27 0.49 No 23 69.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 149572734 + NM_183381 RNF13 1 0.08 0.1 7 8.53 85.53 17 5.96 Yes 60 -1.75 No 0 0 No -39 0.66 Yes 31 53.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 149583607 + NM_183381 RNF13 1 0.38 0.46 23 4.27 0 20 4.51 No 2 0.11 No 0 0 No -19 0.58 No 27 48.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 149591335 + NM_183381 RNF13 1 0.1 0.13 8 8.18 87.58 39 6.34 Yes 26 1.11 Yes 0 0 No -28 0.76 Yes 42 71.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 149619498 + NM_183381 RNF13 1 0.41 0.38 21 12.11 90.65 29 5.48 No 71 0.53 No 0 0 No -28 0.56 No 42 66.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 149631346 + NM_183381 RNF13 1 0.1 0.14 9 11.6 97.2 21 6.29 Yes 8 1.26 Yes 0 0 No -24 0.83 Yes 46 92.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 149631503 + NM_183381 RNF13 1 0.56 0.67 36 5.19 75.69 20 6.53 Yes 13 1.16 Yes 0 0 No -25 0.93 Yes 45 92.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 149636500 + NM_183381 RNF13 1 0.15 0.19 9 10.07 88.27 25 6 Yes 12 1.51 Yes 0 0 No -24 0.93 Yes 46 95.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 149673323 + NM_183381 RNF13 1 0.23 0.21 11 5.42 83.34 34 4.73 No 8 0.4 No 0 0 No -27 0.38 No 50 69.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 29311913 + NM_001184992 RNF135 1 0.58 0.15 10 7.35 88.3 35 5.39 No 16 1.06 Yes 0 0 No -28 0.87 Yes 42 87.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29315003 + NM_001184992 RNF135 1 1.3 0.35 21 6.32 72.9 51 6.64 Yes 47 -2 No 0 0 No -47 0.57 No 23 73.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 29324474 + NM_001184992 RNF135 1 0.32 0.18 9 7.99 86.97 23 6.86 Yes 10 0.21 No 22 0.95 Yes -22 0.95 Yes 48 94.35 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 29673937 + NM_001191324 RNF138 1 0.28 0.33 17 6.97 84.2 26 4.13 No 63 -2.44 No 0 0 No -25 0.83 Yes 45 83.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 29673940 + NM_001191324 RNF138 1 0.12 0.15 8 3.36 87 29 4.25 No 66 -2.45 No 0 0 No -28 0.79 Yes 42 77.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 29703486 + NM_001191324 RNF138 1 0.13 0.21 13 0.15 0 10 2.89 No 18 1.41 Yes 24 0.79 Yes -30 0.86 Yes 40 79.28 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 29693797 + NM_001191324 RNF138 1 0.11 0.14 8 9.27 81.71 36 6.91 Yes 75 -4.34 No 0 0 No -32 0.47 No 38 72.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 29698178 + NM_001191324 RNF138 1 0.22 0.32 17 9.04 91.22 25 6.16 Yes 12 0.47 No 0 0 No -24 0.67 Yes 46 70.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 29703486 + NM_001191324 RNF138 1 0.43 0.72 37 0.15 0 10 2.89 No 18 1.41 Yes 24 0.79 Yes -30 0.86 Yes 40 79.28 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 29706689 + NM_001191324 RNF138 1 0.5 1.17 44 -0.8 75.49 39 6.55 Yes 73 0.74 No 25 0.63 Yes -38 0.81 Yes 32 97.3 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 29709090 + NM_001191324 RNF138 1 0.07 0.18 10 -1.2 0 12 4.24 No 66 1.56 Yes 0 0 No -31 0.63 No 39 79.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 125495500 + NM_007218 RNF139 1 0.38 0.31 19 11.67 90.66 30 7.57 Yes 41 -0.92 No 0 0 No -29 0.89 Yes 41 87.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 141353736 + NM_183401 RNF14 1 0.34 0.24 15 8.58 88.43 15 8.23 Yes 2 1.67 Yes 0 0 No -22 0.48 No 38 42.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 10536574 - NM_016422 RNF141 1 0.22 0.1 7 10.19 90.23 32 5.83 Yes 23 0.27 No 0 0 No -31 0.63 No 39 63.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 158613065 - NM_001199382 RNF145 1 0.19 0.24 14 9.27 87.72 25 7.21 Yes 12 1.03 Yes 0 0 No -24 0.94 Yes 46 96.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 158615077 - NM_001199382 RNF145 1 0.08 0.11 7 6.84 81.6 22 5.95 Yes 9 0.26 No 0 0 No -22 0.9 Yes 48 90.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 158617528 - NM_001199382 RNF145 1 0.39 0.54 25 5.34 86.62 24 5.82 Yes 11 0.23 No 0 0 No -23 0.91 Yes 47 90.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 101893741 - NM_173647 RNF149 1 0.2 0.18 11 -0.68 72.94 33 5.48 No 20 0.7 No 0 0 No -32 0.77 Yes 38 78.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 101902625 - NM_173647 RNF149 1 0.25 0.19 13 3.81 81.23 18 4.9 No 24 1.31 Yes 0 0 No -26 0.63 No 34 68.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 101904026 - NM_173647 RNF149 1 0.13 0.11 8 5.42 69.24 29 5.4 No 0 0.04 No 0 0 No -28 0.79 Yes 42 60.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 101904300 - NM_173647 RNF149 1 0.17 0.13 8 8.64 91.99 24 5.64 Yes 66 0.53 No 0 0 No -23 0.42 No 47 55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 74152457 - NM_052916 RNF157 1 0.87 0.36 20 8.13 81.93 15 5.92 Yes 2 2.49 Yes 19 0.77 Yes -32 0.43 No 38 37.68 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 74152483 - NM_052916 RNF157 1 0.32 0.1 7 7.95 85.23 13 5.97 Yes 0 1.05 Yes 19 0.77 Yes -31 0.61 No 39 78.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 74152578 - NM_052916 RNF157 1 1.06 0.44 24 -6.62 0 16 4.02 No 27 0.86 Yes 0 0 No -39 0.8 Yes 31 71.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74152587 - NM_052916 RNF157 1 3.54 1.28 46 -3.13 0 31 4.44 No 18 0.85 Yes 0 0 No -30 0.84 Yes 40 76.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74152591 - NM_052916 RNF157 1 1.05 0.35 22 -0.57 75 27 4.15 No 14 0.85 Yes 0 0 No -26 0.86 Yes 44 80.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74154654 - NM_052916 RNF157 1 1.17 0.61 32 7.8 86.99 34 6 Yes 41 -2.35 No 0 0 No -33 0.37 No 44 43.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 74158701 - NM_052916 RNF157 1 0.74 0.42 24 -0.22 0 27 6.71 Yes 14 0.88 Yes 0 0 No -26 0.73 Yes 44 75.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74164851 - NM_052916 RNF157 1 0.15 0.1 7 7.55 87.67 33 5.34 No 20 0.28 No 0 0 No -32 0.88 Yes 46 70.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 74168230 - NM_052916 RNF157 1 0.37 0.22 12 5.86 78.27 54 7.41 Yes 41 2.37 Yes 0 0 No -29 0.53 No 42 42.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 74171895 - NM_052916 RNF157 1 4.48 2.33 60 9.56 92.21 23 7.2 Yes 71 -2.21 No 0 0 No -45 0.47 No 25 46.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 74184561 - NM_052916 RNF157 1 1.82 1.01 36 8.34 97.59 28 4.8 No 9 1.07 Yes 0 0 No -21 0.51 No 49 79.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 74195129 - NM_052916 RNF157 1 0.48 0.28 15 5.44 92.34 121 9.69 Yes 53 2.09 Yes 0 0 No -30 0.8 Yes 40 87.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74226916 - NM_052916 RNF157 1 0.53 0.13 7 12.22 88.27 83 9.17 Yes 70 1.75 Yes 0 0 No -48 0.16 No 42 12.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 74235253 - NM_052916 RNF157 1 2.94 0.65 32 5.15 82.82 25 6.19 Yes 59 0.77 No 0 0 No -24 0.43 No 46 47.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 88764524 - NM_001171816 RNF166 1 0.54 0.19 12 2.11 69.44 36 6.48 Yes 38 -0.51 No 0 0 No -35 0.81 Yes 35 86.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88765479 - NM_001171816 RNF166 1 0.41 0.15 8 4.25 77.71 14 4.9 No 24 1.75 Yes 0 0 No -36 0.85 Yes 34 78.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88767349 - NM_001171816 RNF166 1 4.06 1.17 46 5.89 82.85 18 4.84 No 76 -5.99 No 22 0.93 Yes -22 0.86 Yes 48 76.78 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 4844167 + NM_015528 RNF167 1 1.54 1.03 38 9.14 89.06 23 5.52 No 38 -0.51 No 29 0.47 Yes -23 0.43 No 49 26.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 4844217 + NM_015528 RNF167 1 0.56 0.39 23 5.52 78.47 35 6.4 Yes 22 1.18 Yes 34 0.81 Yes -34 0.89 Yes 36 93.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 4844338 + NM_015528 RNF167 1 0.19 0.4 20 -10.71 0 17 4.12 No 47 -3.16 No 29 0.88 Yes -16 0.78 Yes 38 27.17 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 4846453 + NM_015528 RNF167 1 0.05 0.14 10 0.34 68.84 48 7.62 Yes 35 1.03 Yes 22 0.91 Yes -47 0.68 Yes 23 80.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 4846538 + NM_015528 RNF167 1 0.05 0.14 9 10.56 88.38 19 6.5 Yes 75 0.85 Yes 0 0 No -21 0.5 No 49 62.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 4846724 + NM_015528 RNF167 1 1.51 4.36 70 4.11 0 36 6.48 Yes 23 1.42 Yes 0 0 No -35 0.75 Yes 35 89.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4847855 + NM_015528 RNF167 1 0.31 0.81 37 -7.13 76.2 34 5.71 Yes 25 0.24 No 0 0 No -29 0.53 No 41 66.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4848019 + NM_015528 RNF167 1 0.03 0.1 7 0.79 0 14 4.36 No 63 1.83 Yes 0 0 No -29 0.79 Yes 41 90.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196199566 - NM_152617 RNF168 1 0.25 0.44 24 10.35 86.68 16 5.66 Yes 50 -2.36 No 0 0 No -26 0.51 No 49 43.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 196210716 - NM_152617 RNF168 1 0.15 0.24 13 7.05 82.43 35 6 Yes 65 0.76 No 0 0 No -34 0.47 No 36 59.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 196210766 - NM_152617 RNF168 1 0.09 0.15 10 1.72 0 28 5.18 No 15 0.79 Yes 33 0.82 Yes -30 0.75 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 196213500 - NM_152617 RNF168 1 1.37 2.32 62 8.25 98.73 30 5.78 Yes 17 0.98 Yes 0 0 No -29 0.85 Yes 41 77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196223343 - NM_152617 RNF168 1 3.55 3.99 70 4.23 75.87 31 6.71 Yes 18 1.03 Yes 0 0 No -30 0.76 Yes 40 78.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196223431 - NM_152617 RNF168 1 0.27 0.31 18 8.68 85.94 29 5.48 No 74 -3.05 No 0 0 No -23 0.65 No 47 63.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 196226333 - NM_152617 RNF168 1 0.25 0.28 17 9.18 90.72 25 5.45 No -3 -1.79 No 0 0 No -29 0.64 No 41 55.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 74528972 + NM_001098638 RNF169 1 0.44 0.19 12 9.87 86.49 25 5.92 Yes 35 1.69 Yes 0 0 No -24 0.91 Yes 46 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42735347 - NM_001160224 RNF170 1 0.28 0.14 9 10.59 82 29 5.91 Yes -4 0.43 No 0 0 No -28 0.66 No 42 63.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 42740753 - NM_001160224 RNF170 1 0.64 0.31 16 10.38 90.76 24 5.45 No 68 -4.53 No 0 0 No -27 0.6 No 43 54.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 85824029 + NM_016494 RNF181 1 0.72 2.65 59 9.92 90.13 32 4.64 No 4 0.92 Yes 0 0 No -31 0.86 Yes 39 63.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 85823849 + NM_016494 RNF181 1 0.2 0.72 34 6.86 81.65 27 4.85 No 53 1.63 Yes 22 0.44 Yes -20 0.64 No 50 55.62 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 85823929 + NM_016494 RNF181 1 0.26 0.94 40 0.02 77.57 9 3.2 No 70 -4.13 No 20 0.95 Yes -18 0.81 Yes 52 77.99 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 85823979 + NM_016494 RNF181 1 2.98 11.11 71 3.12 77.57 31 6 Yes 43 1.01 Yes 30 0.86 Yes -30 0.88 Yes 40 86.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 85824029 + NM_016494 RNF181 1 0.05 0.18 12 9.92 90.13 32 4.64 No 4 0.92 Yes 0 0 No -31 0.86 Yes 39 63.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 85824075 + NM_016494 RNF181 1 0.64 3.31 63 8.52 83.62 28 5.48 No 50 0.89 Yes 27 0.94 Yes -27 0.87 Yes 43 91.09 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 101271480 - NM_015435 RNF19A 1 0.07 0.15 8 -1.83 0 26 5.62 Yes 13 0.65 No 22 0.5 Yes -25 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 101283505 - NM_015435 RNF19A 1 0.07 0.13 9 7.44 85.22 31 7.37 Yes 18 0.61 No 0 0 No -30 0.41 No 42 46.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 101284080 - NM_015435 RNF19A 1 0.25 0.38 19 5.21 75.25 22 9.38 Yes 9 1.16 Yes 0 0 No -21 0.86 Yes 49 93.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 101287388 - NM_015435 RNF19A 1 0.2 0.28 16 -12.11 0 35 5.37 No 14 0.54 No 0 0 No -26 0.37 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 101288945 - NM_015435 RNF19A 1 0.28 0.38 22 7.52 92.67 46 6.98 Yes 33 1.76 Yes 0 0 No -45 0.78 Yes 25 78.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33402911 - NM_001300826 RNF19B 1 20.34 22.04 72 9.93 89.14 62 8.21 Yes 42 1.36 Yes 32 0.86 Yes -32 0.52 No 38 45.58 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 33402911 - NM_001300826 RNF19B 1 0.39 0.42 23 9.93 89.14 62 8.21 Yes 42 1.36 Yes 32 0.86 Yes -32 0.52 No 38 45.58 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 33404125 - NM_001300826 RNF19B 1 0.17 0.24 13 -3.42 0 31 6.97 Yes 18 0.84 Yes 0 0 No -30 0.78 Yes 40 74.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33408055 - NM_001300826 RNF19B 1 0.08 0.14 9 -0.48 0 15 3.82 No 45 1.9 Yes 0 0 No -32 0.42 No 38 52.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 33409210 - NM_001300826 RNF19B 1 0.16 0.32 13 3.8 84.41 29 6.98 Yes 48 0.94 Yes 0 0 No -28 0.57 No 42 37.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 33413968 - NM_001300826 RNF19B 1 31.56 44.26 72 6.54 71.47 42 6.7 Yes 75 0.72 No 23 0.68 Yes -41 0.71 Yes 29 87.21 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 185040711 + NM_007212 RNF2 1 1.57 0.56 28 9.36 93.87 21 4.99 No 66 1.22 Yes 0 0 No -31 0.68 Yes 39 74.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 185060696 + NM_007212 RNF2 1 4.27 2.71 64 2.32 81.17 21 4.78 No 31 0.27 No 23 0.58 Yes -20 0.85 Yes 50 80.06 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 104296426 + NM_019592 RNF20 1 0.36 0.32 19 12.68 96.25 23 6.15 Yes 58 0.8 Yes 0 0 No -34 0.94 Yes 36 91.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 104297657 + NM_019592 RNF20 1 0.24 0.18 11 3.78 73.75 50 7.02 Yes 37 0.35 No 24 0.79 Yes -49 0.44 No 39 70.84 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 104302819 + NM_019592 RNF20 1 0.11 0.11 8 1.84 72.23 45 6.57 Yes 57 0.43 No 0 0 No -27 0.66 No 43 53.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 104303120 + NM_019592 RNF20 1 0.26 0.21 13 1.96 74.96 37 5.8 Yes 75 -1.51 No 0 0 No -30 0.77 Yes 40 74.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 104303123 + NM_019592 RNF20 1 1.05 0.69 36 2.08 76.82 40 6.03 Yes 39 -0.18 No 0 0 No -33 0.76 Yes 37 73.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 104324566 + NM_019592 RNF20 1 0.1 0.11 7 2.02 60.33 31 6.89 Yes 44 1.88 Yes 0 0 No -30 0.5 No 14 44.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 6269988 + NM_207396 RNF207 1 1.35 0.18 11 2.62 0 32 5.9 Yes 19 -0.96 No 0 0 No -31 0.51 No 45 46.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 6275726 + NM_207396 RNF207 1 3.97 0.33 16 6.86 85.91 36 6.4 Yes 23 1.31 Yes 0 0 No -35 0.44 No 35 83.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 6276162 + NM_207396 RNF207 1 1.13 0.1 7 6.8 90.75 24 6.46 Yes 62 -1.1 No 0 0 No -22 0.84 Yes 48 86.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 78237461 + NM_001256071 RNF213 1 18.62 1.31 52 7.29 89.57 29 6.24 Yes 71 -3.01 No 0 0 No -32 0.58 No 38 66.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 78252544 + NM_001256071 RNF213 1 0.17 0.28 14 3.84 78.51 23 5.09 No 52 -1.98 No 21 0.87 Yes -21 0.65 No 49 58.34 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 78252562 + NM_001256071 RNF213 1 11.96 22.75 72 6.32 88.1 22 5.2 No 70 -1.98 No 21 0.87 Yes -21 0.89 Yes 49 86.01 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 78263461 + NM_001256071 RNF213 1 0.04 0.14 9 -1.93 0 33 4.79 No 60 -2.72 No 0 0 No -32 0.88 Yes 38 67.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 78264344 + NM_001256071 RNF213 1 0.35 0.9 42 -1.71 63.78 12 5 No -1 0.34 No 26 0.52 Yes -11 0.61 No 59 71.27 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 78264629 + NM_001256071 RNF213 1 0.06 0.24 14 1.46 83.13 29 5.73 Yes 28 0.6 No 0 0 No -29 0.58 No 42 56.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 78265428 + NM_001256071 RNF213 1 0.06 0.18 10 -6.55 70.8 25 6 Yes 53 -3.01 No 0 0 No -24 0.64 No 46 76.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 78267919 + NM_001256071 RNF213 1 1.43 3.92 68 7.91 85.65 30 7.96 Yes 29 2.23 Yes 0 0 No -29 0.89 Yes 41 87.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78272086 + NM_001256071 RNF213 1 0.1 0.32 18 0.76 72.33 14 5 No 1 0.86 Yes 26 0.95 Yes -24 0.56 No 13 39.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 78280936 + NM_001256071 RNF213 1 0.56 1.21 53 -1.72 0 12 4.24 No 39 1.38 Yes 0 0 No -47 0.79 Yes 23 88.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78291226 + NM_001256071 RNF213 1 0.03 0.1 7 8.76 85.76 30 5.14 No 53 0.44 No 0 0 No -29 0.66 No 41 83.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 78297018 + NM_001256071 RNF213 1 0.05 0.11 7 6.71 76.6 28 8.08 Yes 44 0.61 No 0 0 No -27 0.77 Yes 43 75.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 78310966 + NM_001256071 RNF213 1 0.33 0.79 34 -0.24 72.15 31 7.1 Yes 18 1.22 Yes 0 0 No -30 0.71 Yes 40 77.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78317689 + NM_001256071 RNF213 1 0.41 0.71 32 8.05 81.95 36 6 Yes 23 -1.36 No 0 0 No -22 0.7 Yes 48 60.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 78324146 + NM_001256071 RNF213 1 0.82 1.61 58 6.25 88.9 18 5.88 Yes 52 1.32 Yes 0 0 No -28 0.6 No 42 44.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 78324150 + NM_001256071 RNF213 1 0.21 0.44 21 3.12 0 22 6.21 Yes 56 1.32 Yes 0 0 No -32 0.37 No 42 41.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 78325034 + NM_001256071 RNF213 1 0.26 0.44 22 2.88 72.46 26 5.57 Yes 74 -1.38 No 0 0 No -24 0.85 Yes 46 88.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 78334142 + NM_001256071 RNF213 1 0.67 1.03 46 6.19 89.58 18 5.56 Yes 5 0.7 No 0 0 No -24 0.82 Yes 46 69.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 78338645 + NM_001256071 RNF213 1 1.76 1.92 61 2.97 74.03 34 6 Yes 72 -6 No 33 0.79 Yes -33 0.84 Yes 37 77.14 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 78339465 + NM_001256071 RNF213 1 1.67 1.75 53 5.8 85.33 32 5.92 Yes 19 0.07 No 0 0 No -31 0.9 Yes 39 93.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 78339798 + NM_001256071 RNF213 1 0.23 0.28 17 7.59 91.33 29 6.55 Yes 16 0.73 No 0 0 No -28 0.96 Yes 42 97.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 78343306 + NM_001256071 RNF213 1 0.05 0.13 9 -3.87 0 34 7.65 Yes 59 0.29 No 0 0 No -33 0.53 No 37 61.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 78343335 + NM_001256071 RNF213 1 0.31 0.68 28 6.83 80.68 24 5.2 No 75 -0.75 No 0 0 No -23 0.79 Yes 47 45.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 78343539 + NM_001256071 RNF213 1 0.22 0.46 24 6.4 80.55 48 5.87 Yes 35 1.18 Yes 26 0.81 Yes -34 0.77 Yes 36 82.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 78344004 + NM_001256071 RNF213 1 0.84 1.68 56 8.79 91.15 18 5.32 No -3 1.09 Yes 0 0 No -26 0.76 Yes 47 74.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78348269 + NM_001256071 RNF213 1 0.08 0.11 7 -3.1 0 15 4.58 No 15 1.96 Yes 0 0 No -38 0.51 No 32 82.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 78350085 + NM_001256071 RNF213 1 0.06 0.11 7 3.27 67.82 34 6.35 Yes 59 0.59 No 24 0.89 Yes -33 0.63 No 37 80.07 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 78353217 + NM_001256071 RNF213 1 0.75 1.76 55 3.67 69.43 34 5.49 No 5 1.2 Yes 19 0.53 Yes -27 0.81 Yes 43 83.02 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 78354632 + NM_001256071 RNF213 1 0.25 0.54 26 -1.27 76.94 36 6.48 Yes 23 1.39 Yes 0 0 No -35 0.95 Yes 35 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78356059 + NM_001256071 RNF213 1 0.13 0.26 12 4 79.05 33 6.55 Yes 20 1.59 Yes 0 0 No -32 0.72 Yes 38 83.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78356799 + NM_001256071 RNF213 1 0.11 0.19 13 5.2 74.62 14 5.41 No 36 0.73 No 0 0 No -23 0.75 Yes 47 75.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 78357856 + NM_001256071 RNF213 1 0.09 0.15 10 7.54 78.28 26 5.09 No 30 0.4 No 0 0 No -20 0.61 No 38 54.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 117117527 + NM_001077239 RNF214 1 0.69 0.32 18 -17.25 56.45 53 8.12 Yes 40 1.82 Yes 0 0 No -52 0.65 No 18 91.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 117152613 + NM_001077239 RNF214 1 0.46 0.17 10 2.35 0 57 8.49 Yes 44 2.1 Yes 0 0 No -56 0.77 Yes 14 92.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 30775589 - NM_001017981 RNF215 1 1.53 0.1 7 0.56 59.93 15 5.61 Yes 48 1.97 Yes 0 0 No -60 0.84 Yes 10 62.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 5662809 - NM_207116 RNF216 1 0.12 0.1 7 -1.87 72.79 38 6.36 Yes 9 1.76 Yes 0 0 No -21 0.61 No 33 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 5690362 - NM_207116 RNF216 1 1.31 1.32 51 1.61 71.34 22 5.77 Yes 61 -5.38 No 0 0 No -21 0.87 Yes 49 83.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 5756535 - NM_207116 RNF216 1 0.45 0.39 21 7.22 84.83 24 6.19 Yes 11 0.78 Yes 0 0 No -23 0.84 Yes 47 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5769177 - NM_207116 RNF216 1 0.22 0.22 11 3.41 78.5 45 6.35 Yes 3 1.53 Yes 0 0 No -29 0.61 No 41 62.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 5779253 - NM_207116 RNF216 1 1.06 0.58 27 1.92 0 36 6.55 Yes 23 1.29 Yes 31 0.66 Yes -31 0.71 Yes 39 72.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 5779257 - NM_207116 RNF216 1 6.44 3.53 68 3.88 80.79 32 6.28 Yes 19 1.31 Yes 31 0.66 Yes -27 0.7 Yes 43 72.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 5781447 - NM_207116 RNF216 1 83.62 26.86 72 5.95 83.76 20 4.74 No 7 0.43 No 27 0.38 Yes -27 0.48 No 47 47.89 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 5806571 - NM_207116 RNF216 1 1.51 0.47 25 9.24 81.63 20 5.65 Yes 7 0.96 Yes 32 0.71 Yes -32 0.88 Yes 38 93.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 5817260 - NM_207116 RNF216 1 0.58 0.22 12 8.29 80.81 58 8.06 Yes 20 1.59 Yes 27 0.91 Yes -27 0.93 Yes 43 94.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 5819285 - NM_207116 RNF216 1 0.67 0.17 10 8.81 85.05 28 7.68 Yes 15 2.21 Yes 0 0 No -27 0.94 Yes 43 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5018641 + NR_023384 RNF216P1 1 0.27 0.15 9 7.74 85.05 29 6.85 Yes 16 0.25 No 0 0 No -26 0.63 No 44 89.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 5024592 + NR_023384 RNF216P1 1 0.29 0.11 7 3.04 81 46 5.22 No 3 1.32 Yes 0 0 No -29 0.6 No 41 62.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 5024592 + NR_023384 RNF216P1 1 34.75 10.88 72 3.04 81 46 5.22 No 3 1.32 Yes 0 0 No -29 0.6 No 41 62.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 5033250 + NR_023384 RNF216P1 1 1.73 0.14 9 7.75 76.1 36 7.13 Yes 23 2.48 Yes 0 0 No -35 0.82 Yes 35 94.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5033930 + NR_023384 RNF216P1 1 1.52 0.13 7 6.71 81.6 31 7.87 Yes 18 2.14 Yes 0 0 No -30 0.91 Yes 40 95.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 79194818 - NM_024546 RNF219 1 0.43 0.26 16 8.76 87.66 28 5.66 Yes 47 -3.11 No 0 0 No -27 0.6 No 43 80.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 79207765 - NM_024546 RNF219 1 4.12 2.72 66 7.56 94.1 20 4 No 7 0.1 No 0 0 No -19 0.81 Yes 51 80.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 79213102 - NM_024546 RNF219 1 0.45 0.42 25 5.97 81.16 41 6.43 Yes 0 0.37 No 0 0 No -27 0.48 No 43 57.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 79217304 - NM_024546 RNF219 1 0.3 0.29 17 5.24 78.76 23 5.32 No 47 1.36 Yes 0 0 No -26 0.6 No 44 74.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45098179 + NM_001319956 RNF220 1 0.16 0.22 11 5.71 84.06 127 11.02 Yes 52 1.81 Yes 0 0 No -28 0.57 No 42 75.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45103981 + NM_001319956 RNF220 1 0.11 0.17 11 7.13 83.98 22 5.52 No -2 1.07 Yes 0 0 No -21 0.32 No 48 32.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45110674 + NM_001319956 RNF220 1 0.09 0.14 7 -3.96 0 16 4.11 No 57 0.25 No 0 0 No -43 0.56 No 49 37.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45111044 + NM_001319956 RNF220 1 0.2 0.26 16 3.58 77.34 34 5.89 Yes 21 1.63 Yes 22 0.72 Yes -33 0.6 No 37 59.28 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 45111078 + NM_001319956 RNF220 1 2.37 3.14 70 4.04 79.78 20 5.1 No 55 1.61 Yes 22 0.72 Yes -19 0.88 Yes 51 86.99 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 3915568 - NM_007219 RNF24 1 3.17 0.4 22 8.93 84.99 33 3.88 No 58 -2.91 No 0 0 No -23 0.4 No 48 48.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 219529968 - NM_022453 RNF25 1 3.12 1.78 58 4.4 84.66 34 5.52 No 21 0.74 No 0 0 No -33 0.39 No 37 67.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 219530780 - NM_022453 RNF25 1 0.17 0.14 8 -6.92 74.04 35 6.08 Yes 22 1.66 Yes 0 0 No -30 0.72 Yes 40 83.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219530808 - NM_022453 RNF25 1 0.77 0.6 28 -5.53 0 18 4.47 No 14 -2.33 No 26 0.27 Yes -17 0.41 No 64 34.08 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 24618555 + NM_017999 RNF31 1 0.4 0.54 31 7.57 75.84 34 4.66 No 6 0.55 No 27 0.39 Yes -34 0.59 No 36 87.41 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 24618656 + NM_017999 RNF31 1 1.8 2.35 58 8.31 87.49 38 7.12 Yes NA NA NA 20 0.49 Yes -20 0.49 No 33 74.27 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 24618685 + NM_017999 RNF31 1 0.97 1.31 50 8.85 79.25 32 6.08 Yes NA NA NA 20 0.49 Yes -20 0.6 No 50 74.91 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 24619245 + NM_017999 RNF31 1 0.08 0.13 9 1.71 82.55 25 4.48 No 61 0.76 No 29 0.92 Yes -20 0.37 No 60 24.51 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 24619809 + NM_017999 RNF31 1 1.09 0.83 34 8.72 88.4 23 5.8 Yes 10 0.6 No 0 0 No -22 0.51 No 39 59.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24620390 + NM_017999 RNF31 1 2.67 1.78 60 4.93 83.46 26 5.2 No 76 0.04 No 0 0 No -23 0.47 No 47 44.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24620450 + NM_017999 RNF31 1 0.33 0.18 9 -4.66 73.2 23 5.39 No 35 0.71 No 0 0 No -22 0.9 Yes 48 39.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 24620507 + NM_017999 RNF31 1 5.5 3.46 70 7.62 93.91 15 6.24 Yes 67 0.53 No 29 0.49 Yes -29 0.52 No 48 58.69 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 24621652 + NM_017999 RNF31 1 0.17 0.18 12 8.52 86.87 16 6.26 Yes 33 0.89 Yes 0 0 No -27 0.61 No 43 71.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 24624161 + NM_017999 RNF31 1 0.26 0.28 17 8.69 81.47 26 5.48 No 22 0 No 0 0 No -25 0.69 Yes 45 60.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 24627040 + NM_017999 RNF31 1 2.04 2.11 64 6.88 81.89 60 6.6 Yes 9 1.95 Yes 0 0 No -40 0.44 No 30 39.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 24629046 + NM_017999 RNF31 1 0.15 0.14 7 5.26 78.7 17 5.92 Yes 4 0.25 No 0 0 No -28 0.79 Yes 42 76.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 24629731 + NM_017999 RNF31 1 0.17 0.18 12 0.66 73.09 25 4.86 No 74 1.35 Yes 0 0 No -27 0.47 No 43 61.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 156437283 + NR_131778 RNF32 1 2.95 0.15 9 5.72 75.58 25 5.51 No 12 0.31 No 24 0.47 Yes -27 0.7 Yes 43 87.01 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 121839841 + NM_194271 RNF34 1 3.14 0.67 31 4.99 74.84 55 5.93 Yes 57 0.63 No 0 0 No -23 0.69 Yes 47 52.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 121852496 + NM_194271 RNF34 1 0.73 0.22 8 3.6 82.47 39 6.46 Yes 67 -1.66 No 0 0 No -39 0.41 No 31 39.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 121855663 + NM_194271 RNF34 1 0.67 0.99 30 10.44 94.63 36 5.69 Yes 70 -0.62 No 0 0 No -33 0.45 No 37 65.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 121841383 + NM_194271 RNF34 1 2.06 0.54 29 9.04 82.22 30 5.08 No 17 0.55 No 0 0 No -29 0.68 Yes 41 66.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 121842218 + NM_194271 RNF34 1 1.36 0.36 18 4.74 84.41 32 10.47 Yes 19 1.11 Yes 0 0 No -31 0.49 No 39 82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 121842651 + NM_194271 RNF34 1 10.81 3.07 61 9.84 94.82 20 5 No 30 0.26 No 19 0.41 Yes -28 0.47 No 42 44.62 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 121842686 + NM_194271 RNF34 1 0.33 0.1 7 -0.21 77.13 18 3.76 No 65 0.24 No 0 0 No -22 0.6 No 48 58.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 121842846 + NM_194271 RNF34 1 0.54 0.14 9 -7.65 68.07 47 5.89 Yes 25 0.92 Yes 0 0 No -30 0.81 Yes 40 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 121850229 + NM_194271 RNF34 1 0.49 0.15 9 7.86 85.02 22 5.83 Yes 9 1.36 Yes 0 0 No -21 0.94 Yes 49 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121855663 + NM_194271 RNF34 1 0.51 0.76 36 10.44 94.63 36 5.69 Yes 70 -0.62 No 0 0 No -33 0.45 No 37 65.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 121858025 + NM_194271 RNF34 1 0.07 0.14 8 5.43 73.27 29 5.29 No -2 1.2 Yes 24 0.92 Yes -28 0.44 No 47 32.32 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 121858732 + NM_194271 RNF34 1 0.27 0.43 24 2.53 0 19 4.32 No 61 0.04 No 0 0 No -18 0.83 Yes 52 85.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 36351217 - NM_194330 RNF38 1 0.15 0.15 10 2.26 62.69 66 8.36 Yes 69 2.28 Yes 22 0.61 Yes -28 0.51 No 38 55.8 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 36370736 - NM_194330 RNF38 1 0.16 0.13 7 6.32 69.52 22 7.28 Yes 9 1.15 Yes 0 0 No -21 0.87 Yes 49 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 36372591 - NM_194330 RNF38 1 0.44 0.36 21 5.34 74.89 37 7.28 Yes 24 1.27 Yes 36 0.83 Yes -36 0.97 Yes 34 97.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 2496290 + NM_001185009 RNF4 1 0.49 0.97 44 8.05 83.82 21 7.21 Yes 8 1.33 Yes 20 0.74 Yes -20 0.88 Yes 50 91.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 2496293 + NM_001185009 RNF4 1 0.12 0.22 15 5.01 80.64 24 7.42 Yes 11 1.3 Yes 20 0.74 Yes -23 0.92 Yes 47 92.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 2496360 + NM_001185009 RNF4 1 0.05 0.1 7 1.61 77.34 24 7.03 Yes 11 1.66 Yes 0 0 No -23 0.86 Yes 47 81.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2496700 + NM_001185009 RNF4 1 0.12 0.25 14 6.18 78.86 20 5.2 No 29 0.3 No 0 0 No -28 0.4 No 54 40.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 2498725 + NM_001185009 RNF4 1 0.11 0.24 14 1.79 0 38 6.49 Yes 6 1.51 Yes 26 0.84 Yes -23 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 2498735 + NM_001185009 RNF4 1 0.83 1.79 55 -4.68 74.81 48 6.99 Yes 16 1.49 Yes 0 0 No -33 0.89 Yes 37 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2509606 + NM_001185009 RNF4 1 0.14 0.26 16 4.43 0 42 6.59 Yes 29 1.25 Yes 0 0 No -45 0.52 No 29 68.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 2514168 + NM_001185009 RNF4 1 0.19 0.39 20 -4.81 0 19 5.03 No 6 1.37 Yes 26 0.51 Yes -26 0.64 No 44 39.2 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 2515430 + NM_001185009 RNF4 1 0.08 0.19 12 9.89 84.43 14 5.83 Yes 1 1.14 Yes 0 0 No -20 0.46 No 50 46.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 30776265 + NM_001286572 RNF40 1 0.09 0.13 8 -3.17 0 10 4 No 28 0.99 Yes 0 0 No -28 0.89 Yes 42 94.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30778063 + NM_001286572 RNF40 1 0.07 0.11 7 -18.96 59.09 19 6.63 Yes 52 -3.62 No 0 0 No -18 0.79 Yes 52 79.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30779943 + NM_001286572 RNF40 1 0.16 0.26 15 -0.47 0 36 5.7 Yes 52 1.39 Yes 0 0 No -35 0.66 No 35 82.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 30783389 + NM_001286572 RNF40 1 0.84 1.07 45 2.63 72.25 25 4.19 No 68 -4.06 No 22 0.95 Yes -24 0.87 Yes 46 77.26 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 30783393 + NM_001286572 RNF40 1 0.35 0.49 26 -1.09 0 29 4.53 No 72 -4.06 No 22 0.95 Yes -28 0.71 Yes 49 48.01 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 30783412 + NM_001286572 RNF40 1 0.14 0.18 11 -9.98 75.96 26 5.29 No 13 0.2 No 0 0 No -25 0.93 Yes 45 91.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30785135 + NM_001286572 RNF40 1 0.68 1.03 41 9.65 90.99 26 5.29 No 17 0.63 No 25 0.92 Yes -25 0.7 Yes 41 72.48 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 30785297 + NM_001286572 RNF40 1 0.07 0.11 7 -3.34 59.24 31 6.93 Yes 46 1.56 Yes 0 0 No -30 0.71 Yes 40 36.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 30785634 + NM_001286572 RNF40 1 0.47 0.68 35 9.38 85.81 31 5.42 No 18 -0.32 No 30 0.54 Yes -30 0.7 Yes 40 79.73 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 56601095 - NM_194359 RNF41 1 1.37 0.86 40 7.75 89.89 11 4.31 No 73 -4.32 No 23 0.59 Yes -21 0.4 No 47 32.39 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 56606846 - NM_194359 RNF41 1 1.22 0.74 36 3 86.7 22 3.7 No 29 0.33 No 25 0.7 Yes -21 0.92 Yes 49 85.67 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 56606862 - NM_194359 RNF41 1 0.7 0.47 25 5.76 73.46 26 4.68 No 13 0.3 No 25 0.7 Yes -20 0.61 No 50 63.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 56606918 - NM_194359 RNF41 1 0.61 0.42 21 -7.7 0 37 8 Yes 24 2.27 Yes 0 0 No -36 0.76 Yes 34 79.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56606923 - NM_194359 RNF41 1 23.71 15.35 72 -0.95 61.67 32 7.68 Yes 19 2.27 Yes 31 0.94 Yes -31 0.78 Yes 39 85.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 175956420 - NM_014901 RNF44 1 0.71 0.54 27 4.77 74.64 21 5.2 No 8 1.35 Yes 21 0.84 Yes -24 0.5 No 46 77.12 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 175957736 - NM_014901 RNF44 1 0.46 0.18 13 1.06 0 12 4.24 No 18 2 Yes 0 0 No -30 0.64 No 40 81.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 175957882 - NM_014901 RNF44 1 3.27 0.92 37 3.08 67.29 21 4.7 No 59 1.25 Yes 0 0 No -24 0.28 No 52 25.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 175958014 - NM_014901 RNF44 1 5.29 1.49 52 -1.44 0 18 4.24 No 22 1.2 Yes 0 0 No -34 0.96 Yes 36 95.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 175958559 - NM_014901 RNF44 1 0.74 0.47 28 8.03 88.88 26 4.87 No 16 0.81 Yes 0 0 No -28 0.56 No 42 61.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 175959100 - NM_014901 RNF44 1 3.04 0.47 25 7.37 72.37 21 6.3 Yes 32 0.96 Yes 0 0 No -33 0.58 No 50 56.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 175959131 - NM_014901 RNF44 1 103.33 15.93 72 5.75 79.73 21 5.19 No 1 0.52 No 20 0.6 Yes -20 0.69 Yes 50 65.37 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 175959134 - NM_014901 RNF44 1 10.66 1.78 50 4.28 83.34 18 4.9 No -2 0.71 No 20 0.6 Yes -17 0.56 No 53 55.76 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 26789685 - NM_005977 RNF6 1 0.07 0.1 7 4.25 0 21 4.24 No 51 0.45 No 0 0 No -20 0.91 Yes 50 91.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 26792729 - NM_005977 RNF6 1 0.22 0.4 21 -6.75 0 18 4.58 No 13 0.1 No 20 0.76 Yes -41 0.54 No 29 42.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 26792741 - NM_005977 RNF6 1 0.78 1.4 56 -9.59 74.39 29 4.31 No 69 0.3 No 20 0.76 Yes -24 0.52 No 41 53.8 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 26792760 - NM_005977 RNF6 1 0.36 0.64 29 -0.58 71.65 24 4.95 No 50 0.3 No 25 0.84 Yes -24 0.78 Yes 46 70.59 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 26793801 - NM_005977 RNF6 1 0.71 1.25 51 -6.65 0 38 6.95 Yes 17 0.35 No 0 0 No -37 0.44 No 33 72.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 37326958 + NM_183078 RNF8 1 3.37 1.68 54 10.98 92.34 29 5.33 No 16 0.04 No 28 0.85 Yes -28 0.87 Yes 42 95.26 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 37336153 + NM_183078 RNF8 1 5.12 2.63 64 3.36 78.43 44 5.27 No 47 0.67 No 30 0.56 Yes -30 0.83 Yes 40 94.08 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 37337566 + NM_183078 RNF8 1 2.06 1.15 47 4.17 82.62 38 6.08 Yes 25 0.07 No 28 0.3 Yes -30 0.42 No 40 57.5 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 37339256 + NM_183078 RNF8 1 0.46 0.25 15 12.8 93.09 62 7.94 Yes 72 2 Yes 33 0.26 Yes -30 0.88 Yes 40 85.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 58031506 - NM_016125 RNFT1 1 0.72 0.24 11 -13.37 74.78 16 4.65 No 3 0.45 No 0 0 No -25 0.38 No 46 68.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 58036063 - NM_016125 RNFT1 1 6.24 1.51 49 9.62 99.45 22 4.97 No 9 0.74 No 21 0.93 Yes -21 0.93 Yes 49 92.92 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 117176277 + NM_032814 RNFT2 1 1.04 0.22 12 8.44 88.37 31 5.92 Yes 51 -0.4 No 0 0 No -28 0.69 Yes 42 72.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 117186466 + NM_032814 RNFT2 1 2.13 0.5 25 4.8 68.17 42 6.65 Yes 29 0.93 Yes 31 0.79 Yes -31 0.69 Yes 29 72.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 117188729 + NM_032814 RNFT2 1 0.89 0.21 11 2.54 0 34 13.85 Yes 72 -4.67 No 0 0 No -29 0.32 No 37 36.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 117217861 + NM_032814 RNFT2 1 0.46 0.11 8 4 72.93 32 6.08 Yes 19 0.23 No 0 0 No -31 0.67 Yes 39 68.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 117247878 + NM_032814 RNFT2 1 2.03 0.53 28 8.98 88.5 49 6.87 Yes 5 1.24 Yes 0 0 No -32 0.55 No 38 78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 117262787 + NM_032814 RNFT2 1 2.02 0.5 24 7.78 85.96 37 7.87 Yes 24 0.67 No 0 0 No -26 0.35 No 47 37.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 89333254 - NM_003800 RNGTT 1 0.35 0.53 29 5.11 82.81 21 5.19 No 8 0.35 No 0 0 No -20 0.59 No 50 77.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 89345499 - NM_003800 RNGTT 1 0.69 1.04 38 6.66 85.66 24 5.1 No 11 0.9 Yes 0 0 No -23 0.77 Yes 47 72.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89357672 - NM_003800 RNGTT 1 0.14 0.24 14 7.41 84.78 23 6.62 Yes 10 0.75 No 0 0 No -22 0.49 No 44 52.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 89386087 - NM_003800 RNGTT 1 0.1 0.14 8 9.65 95.02 34 7.12 Yes 21 1.65 Yes 0 0 No -33 0.84 Yes 37 71.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89424016 - NM_003800 RNGTT 1 0.14 0.14 8 8.06 84.67 25 5.13 No 12 1.41 Yes 0 0 No -24 0.95 Yes 46 93.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89501728 - NM_003800 RNGTT 1 0.37 0.42 26 11.83 90.14 24 4.87 No 11 0.83 Yes 0 0 No -27 0.51 No 47 60 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 89513529 - NM_003800 RNGTT 1 0.19 0.19 12 5.88 89.93 34 7.07 Yes 21 2.02 Yes 0 0 No -33 0.9 Yes 37 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89552624 - NM_003800 RNGTT 1 0.65 0.64 31 9.81 86.62 23 5.83 Yes 10 1.22 Yes 0 0 No -22 0.78 Yes 48 81.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89554199 - NM_003800 RNGTT 1 1.06 1.19 46 8.65 83.59 21 5.88 Yes 48 1.24 Yes 0 0 No -28 0.47 No 42 63.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 89559543 - NM_003800 RNGTT 1 0.26 0.31 15 -10.45 75.68 24 6.08 Yes 11 1.24 Yes 0 0 No -23 0.91 Yes 47 93.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89572234 - NM_003800 RNGTT 1 0.2 0.22 13 8.09 82.98 24 6.1 Yes 72 0.87 Yes 0 0 No -23 0.94 Yes 47 96.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89582989 - NM_003800 RNGTT 1 0.15 0.17 10 8.51 82.77 49 4.46 No 15 0.96 Yes 0 0 No -23 0.61 No 47 77.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 89583419 - NM_003800 RNGTT 1 0.31 0.35 22 7.15 80.33 24 4.41 No 68 0.71 No 0 0 No -24 0.6 No 46 57.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 89597830 - NM_003800 RNGTT 1 0.11 0.13 8 2.84 0 66 7.53 Yes 22 0.7 No 0 0 No -28 0.81 Yes 42 87.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 89611905 - NM_003800 RNGTT 1 0.11 0.11 8 6.28 84.59 39 5.82 Yes 26 0.89 Yes 0 0 No -33 0.53 No 37 51.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 89614639 - NM_003800 RNGTT 1 1.01 0.76 41 -1.23 0 32 5.51 No 68 -1.69 No 0 0 No -27 0.58 No 46 73.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 89614643 - NM_003800 RNGTT 1 0.15 0.13 8 0.09 75.65 28 5.14 No 74 -1.82 No 0 0 No -23 0.66 Yes 50 76.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 89615839 - NM_003800 RNGTT 1 0.28 0.19 12 5.6 89.74 26 5.19 No 72 0.01 No 0 0 No -25 0.57 No 45 52.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 89640827 - NM_003800 RNGTT 1 0.34 0.29 15 6.46 76.35 13 6.26 Yes 0 1 Yes 0 0 No -32 0.67 Yes 38 80.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 89650896 - NM_003800 RNGTT 1 4.2 3.99 71 -1.09 0 55 5.98 Yes 37 0.9 Yes 0 0 No -35 0.5 No 47 50.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 89660524 - NM_003800 RNGTT 1 0.35 0.32 17 9.16 88.21 15 5.28 No 2 1.32 Yes 0 0 No -26 0.67 Yes 44 71.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 499129 - NM_203388 RNH1 1 0.13 0.26 14 9.73 81.58 23 5.15 No 63 1.34 Yes 0 0 No -22 0.51 No 48 71.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 499924 - NM_203388 RNH1 1 0.45 1.11 42 7.19 86.64 23 5.86 Yes 45 -0.37 No 22 0.54 Yes -22 0.48 No 48 38.23 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 500015 - NM_203388 RNH1 1 0.3 0.69 34 -2.32 0 20 4.58 No 64 -4.37 No 19 0.96 Yes -19 0.92 Yes 51 89.85 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 500739 - NM_203388 RNH1 1 0.24 0.69 31 5.61 65.7 81 6.78 Yes 21 1.27 Yes 33 0.82 Yes -33 0.84 Yes 37 70.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 501585 - NM_203388 RNH1 1 0.06 0.18 12 1.94 67.48 50 7.35 Yes 68 -1.76 No 0 0 No -31 0.82 Yes 39 88.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 502250 - NM_203388 RNH1 1 112.45 63.58 72 9.1 83.78 31 5.47 No 60 0.29 No 23 0.57 Yes -23 0.71 Yes 47 47.8 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 504997 - NM_203388 RNH1 1 22.59 12.6 71 1.25 0 21 5.92 Yes 66 -6.05 No 20 0.28 Yes -29 0.17 No 41 17.7 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 505002 - NM_203388 RNH1 1 2.07 1.13 45 -4.29 66.73 16 5.48 No 75 -6.12 No 20 0.28 Yes -24 0.19 No 46 21.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 90069234 - NM_001031709 RNLS 1 7.88 0.85 36 5.02 93.7 23 4.8 No 10 0.32 No 0 0 No -22 0.82 Yes 48 72.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 90103566 - NM_001031709 RNLS 1 4.7 0.51 26 7.19 87.99 28 6.61 Yes 15 0.81 Yes 0 0 No -26 0.42 No 39 39.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13740167 + NM_003799 RNMT 1 0.1 0.1 7 -7.63 0 23 7.44 Yes 10 1.65 Yes 0 0 No -26 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 13742489 + NM_003799 RNMT 1 0.14 0.15 9 -7.48 60.91 51 8.13 Yes 38 1.24 Yes 0 0 No -50 0.69 Yes 20 84.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 13752303 + NM_003799 RNMT 1 0.73 0.61 32 7.44 74.04 49 6.86 Yes 69 0.8 Yes 28 0.72 Yes -34 0.45 No 36 48.36 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 13755446 + NM_003799 RNMT 1 0.25 0.18 10 10.32 86.75 28 4.04 No 44 1.51 Yes 0 0 No -22 0.59 No 40 36.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13757212 + NM_003799 RNMT 1 1.45 1.03 39 3.86 77.49 22 3.62 No 9 1 Yes 0 0 No -31 0.46 No 43 66.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13759678 + NM_003799 RNMT 1 0.15 0.11 8 5.17 66.76 45 6.82 Yes -4 0.89 Yes 0 0 No -44 0.54 No 34 59.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 13762037 + NM_003799 RNMT 1 10.09 7.21 72 8.37 86.41 22 6.26 Yes 26 1.24 Yes 21 0.81 Yes -21 0.73 Yes 32 54.86 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 104076394 + NM_017619 RNPC3 1 1.03 0.57 28 5.58 70.85 29 5.65 Yes 44 0.45 No 0 0 No -28 0.8 Yes 42 61.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 104079537 + NM_017619 RNPC3 1 0.23 0.11 7 4.62 82.17 24 5.29 No 11 0.32 No 0 0 No -27 0.81 Yes 43 68.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 104082214 + NM_017619 RNPC3 1 2.34 1.35 51 9.83 83.4 35 6.71 Yes 22 1.44 Yes 0 0 No -34 0.43 No 36 64.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 104083411 + NM_017619 RNPC3 1 0.24 0.15 11 4.04 76.37 27 5.34 No 1 0.3 No 0 0 No -26 0.5 No 44 67.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 104085920 + NM_017619 RNPC3 1 27.79 14.38 72 2.52 81.09 27 7.65 Yes 14 1.11 Yes 23 0.89 Yes -26 0.8 Yes 44 86.58 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 104087598 + NM_017619 RNPC3 1 4.42 2.35 65 4.68 73.9 22 4.84 No 20 0.33 No 21 0.83 Yes -21 0.65 No 49 57.76 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 104089204 + NM_017619 RNPC3 1 0.67 0.36 21 5.16 82.67 34 5.83 Yes 59 0.64 No 0 0 No -33 0.87 Yes 37 85.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 104094345 + NM_017619 RNPC3 1 1.22 0.5 26 1.46 73.07 34 4.81 No 43 -3.09 No 30 0.85 Yes -33 0.84 Yes 37 88.1 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 201958616 + NM_001319182 RNPEP 1 0.12 0.13 8 7.1 74.87 25 5.4 No 12 0.32 No 0 0 No -24 0.9 Yes 46 91.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 201959380 + NM_001319182 RNPEP 1 0.17 0.24 14 6.28 79.41 29 7.97 Yes 60 1.1 Yes 0 0 No -29 0.38 No 41 42.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 201960287 + NM_001319182 RNPEP 1 0.14 0.22 15 5.45 84.95 27 4.07 No 24 -0.84 No 0 0 No -26 0.63 No 44 50.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 201966532 + NM_001319182 RNPEP 1 0.07 0.14 9 6.59 71.3 26 6.78 Yes 13 2.31 Yes 0 0 No -25 0.91 Yes 45 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 241511899 + NM_018226 RNPEPL1 1 1.1 0.94 38 6.8 89.86 21 5.16 No 68 1.44 Yes 0 0 No -24 0.51 No 50 46.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 241512544 + NM_018226 RNPEPL1 1 1.39 1.51 54 2.15 71.82 23 5.2 No 24 0.85 Yes 0 0 No -22 0.62 No 48 90.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 241514459 + NM_018226 RNPEPL1 1 0.13 0.17 8 -7.19 0 9 4.36 No 74 2.11 Yes 24 0.85 Yes -39 0.31 No 32 46.72 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 241515914 + NM_018226 RNPEPL1 1 0.09 0.11 7 -2.01 0 18 4.47 No 5 0.61 No 26 0.61 Yes -17 0.91 Yes 53 93.63 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 241515984 + NM_018226 RNPEPL1 1 4.48 5.28 70 4.99 78.21 22 3.92 No 75 0.57 No 21 0.58 Yes -21 0.65 No 49 67.42 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 241516016 + NM_018226 RNPEPL1 1 0.47 0.6 29 3.76 77.46 18 4.9 No 68 0.54 No 0 0 No -17 0.64 No 53 58.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 241516055 + NM_018226 RNPEPL1 1 0.18 0.19 12 1.78 0 20 4.58 No 15 1.27 Yes 0 0 No -27 0.53 No 43 79.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 2314762 - NM_001286627 RNPS1 1 107.07 135.36 72 7.96 82.29 31 7.21 Yes 18 0.95 Yes 30 0.82 Yes -30 0.84 Yes 40 92.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 18531077 - NM_005406 ROCK1 1 0.15 0.31 20 6.08 87.59 25 5.2 No 52 0.35 No 0 0 No -24 0.9 Yes 46 93.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 18550473 - NM_005406 ROCK1 1 0.08 0.14 8 -8.53 63.2 33 5.8 Yes 29 0.65 No 0 0 No -32 0.68 Yes 38 95.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 18562790 - NM_005406 ROCK1 1 0.05 0.11 7 -1.71 0 29 6.78 Yes 16 1.13 Yes 0 0 No -28 0.92 Yes 42 97.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 18577541 - NM_005406 ROCK1 1 0.36 0.5 26 9.17 85.21 28 5.88 Yes 15 1.23 Yes 0 0 No -27 0.59 No 43 67.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 18586555 - NM_005406 ROCK1 1 0.08 0.22 16 -1.04 0 38 6.47 Yes 65 -3.71 No 0 0 No -29 0.57 No 41 82.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 18586590 - NM_005406 ROCK1 1 0.26 0.76 36 2.47 76.8 27 5.55 No 30 -4.16 No 33 0.64 Yes -26 0.6 No 44 57.66 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr18 18596378 - NM_005406 ROCK1 1 0.04 0.11 8 6 76.82 50 8.9 Yes 37 0.78 Yes 0 0 No -35 0.46 No 35 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 18597060 - NM_005406 ROCK1 1 1.15 2.99 65 4.97 84.86 27 5.48 No 59 -4.41 No 0 0 No -29 0.84 Yes 41 89.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 18598464 - NM_005406 ROCK1 1 0.12 0.29 17 9.55 91.39 16 5.73 Yes 3 1.42 Yes 0 0 No -27 0.52 No 17 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 18599756 - NM_005406 ROCK1 1 0.08 0.22 15 9.93 85.05 30 5.66 Yes 17 0.48 No 0 0 No -30 0.33 No 41 40.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 18600198 - NM_005406 ROCK1 1 2.47 3.94 71 4.2 73.35 31 6.08 Yes 36 0.66 No 0 0 No -34 0.44 No 36 42.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 18602526 - NM_005406 ROCK1 1 0.15 0.24 16 11.83 93.09 25 6.32 Yes 12 0.25 No 0 0 No -24 0.64 No 46 42.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 18622667 - NM_005406 ROCK1 1 0.05 0.1 7 -1.17 0 35 5.52 No 10 0.7 No 0 0 No -22 0.67 Yes 36 70.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 18624146 - NM_005406 ROCK1 1 0.07 0.14 8 -1.09 71.08 36 6.48 Yes 32 1.42 Yes 0 0 No -23 0.59 No 47 77.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 18629840 - NM_005406 ROCK1 1 0.05 0.11 8 -15.13 0 35 4.55 No 9 0.59 No 0 0 No -30 0.48 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 18674295 - NM_005406 ROCK1 1 0.05 0.1 7 10.38 81.67 37 7.14 Yes 24 1.02 Yes 0 0 No -36 0.84 Yes 34 78.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 11325828 - NM_004850 ROCK2 1 0.25 0.11 8 9.26 92.17 16 5.23 No 3 1.6 Yes 0 0 No -27 0.37 No 11 55.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 11327050 - NM_004850 ROCK2 1 0.51 0.25 14 4.95 80.94 34 4.98 No 67 0.96 Yes 0 0 No -25 0.61 No 45 67.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 11355182 - NM_004850 ROCK2 1 0.17 0.11 7 2.05 78.95 36 6.28 Yes 32 -1.37 No 0 0 No -27 0.28 No 43 39.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 11418637 - NM_004850 ROCK2 1 0.32 0.13 7 7.91 83.43 14 4.22 No 1 1.2 Yes 0 0 No -34 0.8 Yes 36 87.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 11425386 - NM_004850 ROCK2 1 1.61 0.44 24 10.86 88.27 28 7.41 Yes 15 0.99 Yes 0 0 No -27 0.76 Yes 43 76.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4847863 - NM_024589 ROGDI 1 19.21 2.19 66 2.84 77.39 26 4.64 No 61 -1.27 No 23 0.91 Yes -41 0.38 No 50 42.67 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 34288696 + NM_080748 ROMO1 1 0.26 1.08 46 5.84 70.71 33 5.76 Yes 8 1.27 Yes 32 0.72 Yes -32 0.62 No 38 75.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 60795864 - NM_134261 RORA 1 1.08 0.29 15 4.83 80.96 25 6.32 Yes 33 1.48 Yes 0 0 No -24 0.86 Yes 46 86.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 60806266 - NM_134261 RORA 1 1.79 0.24 13 2.91 67.98 27 5.43 No 14 0.81 Yes 0 0 No -26 0.6 No 44 65.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 33138825 - NM_203288 RP9 1 0.21 0.13 8 7.29 86.88 45 5.92 Yes 5 0.82 Yes 0 0 No -31 0.85 Yes 39 88.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1745068 + NM_002945 RPA1 1 0.12 0.25 14 4.76 87.11 21 4.69 No 8 1.59 Yes 0 0 No -20 0.85 Yes 50 92.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1746108 + NM_002945 RPA1 1 0.11 0.25 17 -0.33 0 15 4.58 No 26 1.01 Yes 0 0 No -38 0.95 Yes 32 98.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1747802 + NM_002945 RPA1 1 0.05 0.18 12 2.36 0 25 5.57 Yes 40 1.32 Yes 0 0 No -24 0.57 No 46 66.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 1748267 + NM_002945 RPA1 1 1 2.43 62 6.57 85.51 25 6.22 Yes 58 1.12 Yes 0 0 No -24 0.94 Yes 46 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1760796 + NM_002945 RPA1 1 0.04 0.14 10 10.84 81.42 26 5.39 No 13 1.72 Yes 0 0 No -25 0.91 Yes 45 93.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1760854 + NM_002945 RPA1 1 0.05 0.15 8 4.48 69.1 46 7.62 Yes 33 1.78 Yes 0 0 No -45 0.75 Yes 25 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1761459 + NM_002945 RPA1 1 0.06 0.15 9 7.72 82.61 22 5.15 No 9 -1.34 No 0 0 No -24 0.74 Yes 46 56.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 1782510 + NM_002945 RPA1 1 0.03 0.11 7 -21.41 0 31 6.08 Yes 29 -0.67 No 0 0 No -30 0.93 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 1794545 + NM_002945 RPA1 1 0.08 0.15 9 9.46 93.62 22 5.85 Yes 56 1.26 Yes 0 0 No -21 0.6 No 49 74.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 1797645 + NM_002945 RPA1 1 0.03 0.13 7 3.8 80.12 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.61 No 51 79.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 28221906 - NM_001297558 RPA2 1 0.04 0.1 7 6.12 84 15 5.38 No 2 1.51 Yes 0 0 No -26 0.45 No 44 59.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 7676744 - NM_002947 RPA3 1 0.03 0.13 7 8.47 82.09 27 3.8 No 10 0.44 No 26 0.82 Yes -26 0.52 No 44 63.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 7678742 - NM_002947 RPA3 1 0.05 0.19 13 8.39 93.5 31 6.55 Yes 54 -1.83 No 0 0 No -30 0.66 Yes 45 70.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5324617 + NM_001033002 RPAIN 1 0.46 0.39 21 0.14 80.67 53 7.29 Yes 58 0.99 Yes 0 0 No -52 0.25 No 18 52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5329456 + NM_001033002 RPAIN 1 0.56 0.31 20 6.96 76.94 26 5.85 Yes 62 1.19 Yes 0 0 No -31 0.76 Yes 42 78.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41809909 - NM_015540 RPAP1 1 0.25 0.15 8 0.43 62.47 18 5.56 Yes 2 0.65 No 24 0.93 Yes -28 0.79 Yes 42 60.47 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 41810083 - NM_015540 RPAP1 1 0.96 0.47 25 -1.7 0 15 4.58 No 62 -3.44 No 29 0.91 Yes -14 0.2 No 56 26.98 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 41810403 - NM_015540 RPAP1 1 0.47 0.28 18 6.94 78.59 84 9.77 Yes 71 1.2 Yes 24 0.92 Yes -34 0.82 Yes 36 87.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 41817364 - NM_015540 RPAP1 1 0.74 0.47 23 3.13 76.82 22 3.55 No 2 2 Yes 21 0.95 Yes -21 0.95 Yes 49 95.05 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 41817790 - NM_015540 RPAP1 1 0.16 0.1 7 -0.12 69.47 28 6.92 Yes 69 -2.74 No 0 0 No -27 0.95 Yes 43 95.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41819738 - NM_015540 RPAP1 1 0.31 0.21 13 1.21 0 25 6.16 Yes 12 1.32 Yes 0 0 No -24 0.8 Yes 46 66.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41819742 - NM_015540 RPAP1 1 0.44 0.29 18 2.18 76.88 21 5.83 Yes 8 1.36 Yes 0 0 No -20 0.68 Yes 50 65.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41825662 - NM_015540 RPAP1 1 0.7 0.5 27 11.12 95.65 38 6.4 Yes 34 0.39 No 0 0 No -36 0.86 Yes 34 91.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41836279 - NM_015540 RPAP1 1 1.29 0.31 19 8.1 77.09 32 5.14 No 19 -0.61 No 0 0 No -24 0.66 Yes 46 53.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 92765893 + NM_024813 RPAP2 1 0.25 0.14 8 7.96 87.82 23 9.6 Yes 10 1.2 Yes 0 0 No -23 0.38 No 48 39.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 92765975 + NM_024813 RPAP2 1 1.84 0.88 16 7.16 92.25 30 5.59 Yes 17 0.54 No 0 0 No -29 0.92 Yes 41 96.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 92768794 + NM_024813 RPAP2 1 0.87 0.43 24 7.04 90.68 26 6.54 Yes 46 0.29 No 0 0 No -25 0.41 No 40 38.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 92772755 + NM_024813 RPAP2 1 0.08 0.11 8 6.49 0 14 4.47 No 12 1 Yes 0 0 No -27 0.59 No 43 51.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 92776178 + NM_024813 RPAP2 1 0.31 0.32 19 6.17 87.49 22 4.86 No 3 0.21 No 0 0 No -26 0.37 No 44 23.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 92798972 + NM_024813 RPAP2 1 0.12 0.15 11 6.9 79.39 22 4.12 No 9 0.6 No 0 0 No -27 0.82 Yes 43 78.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 92813487 + NM_024813 RPAP2 1 0.27 0.25 13 4.33 84.41 36 5.25 No 10 0.39 No 0 0 No -22 0.46 No 35 51.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 92815208 + NM_024813 RPAP2 1 1.35 1.08 46 7.88 77.57 23 6.19 Yes 39 1.48 Yes 0 0 No -22 0.86 Yes 48 86.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 92817157 + NM_024813 RPAP2 1 0.83 0.67 31 8.08 84.72 39 7.67 Yes 42 2.17 Yes 0 0 No -38 0.71 Yes 32 93.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 92823113 + NM_024813 RPAP2 1 8.48 6.83 71 11.06 94.53 26 7.21 Yes 13 1.58 Yes 0 0 No -25 0.9 Yes 45 92.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 92823502 + NM_024813 RPAP2 1 1.32 1.15 49 9.02 86.79 24 6 Yes 56 0.28 No 0 0 No -23 0.89 Yes 47 84.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 92829265 + NM_024813 RPAP2 1 0.61 0.51 29 8.13 81.98 30 6.44 Yes 31 -0.74 No 0 0 No -29 0.72 Yes 41 83.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 92834074 + NM_024813 RPAP2 1 0.2 0.15 10 6.52 91.89 30 8.15 Yes 17 1.22 Yes 0 0 No -29 0.71 Yes 40 74.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 92835043 + NM_024813 RPAP2 1 0.52 0.46 24 5.63 85.86 17 6.89 Yes 9 1.24 Yes 0 0 No -21 0.79 Yes 49 79.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 92835046 + NM_024813 RPAP2 1 0.49 0.39 17 2.76 85.51 20 7.1 Yes 12 1.21 Yes 0 0 No -24 0.81 Yes 46 82.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 48058627 - NM_024604 RPAP3 1 0.32 0.38 22 8.33 77.11 45 6.82 Yes 70 1.42 Yes 34 0.79 Yes -34 0.83 Yes 36 91.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 48061608 - NM_024604 RPAP3 1 0.24 0.28 18 3.99 75.72 21 5.96 Yes 40 1.01 Yes 0 0 No -30 0.26 No 18 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 48064005 - NM_024604 RPAP3 1 0.43 0.43 22 -3.12 63.9 22 4.9 No 57 0.2 No 0 0 No -21 0.85 Yes 49 48.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 48064008 - NM_024604 RPAP3 1 1.28 1.25 43 -4.6 0 19 4.58 No 54 0.2 No 0 0 No -18 0.81 Yes 52 58.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 48064020 - NM_024604 RPAP3 1 0.24 0.22 13 1.57 74.33 16 5.29 No 42 0.21 No 0 0 No -23 0.72 Yes 47 53.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 48064081 - NM_024604 RPAP3 1 0.15 0.14 10 1.91 76.76 24 5.31 No 46 0.46 No 0 0 No -23 0.63 No 43 40.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 48081805 - NM_024604 RPAP3 1 0.66 1 45 8.86 85.24 18 7.14 Yes 57 0.58 No 22 0.69 Yes -27 0.69 Yes 43 74.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 48093948 - NM_024604 RPAP3 1 5.48 7.18 72 2.32 75.17 15 4.8 No 2 0.87 Yes 31 0.83 Yes -31 0.77 Yes 39 91.4 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 48094527 - NM_024604 RPAP3 1 0.12 0.14 9 7.14 82.98 29 5.57 Yes 44 0.38 No 0 0 No -28 0.58 No 42 66.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 210879235 + NM_001278283 RPE 1 0.67 1.04 48 7.74 78.22 19 4.54 No 40 0.37 No 0 0 No -26 0.6 No 44 75.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 210882495 + NM_001278283 RPE 1 0.43 0.65 32 3.7 0 50 7.48 Yes 37 0.81 Yes 24 0.96 Yes -44 0.55 No 26 65.23 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 210882513 + NM_001278283 RPE 1 0.65 1.01 48 4.42 84.48 25 5.2 No 55 0.8 Yes 24 0.96 Yes -24 0.89 Yes 46 62.37 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 210882876 + NM_001278283 RPE 1 4.55 7.56 72 3.24 76.65 22 4.77 No 53 0.64 No 24 0.85 Yes -24 0.76 Yes 46 71.81 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 210884396 + NM_001278283 RPE 1 1.63 2.65 63 3.26 0 23 6.09 Yes 10 1.75 Yes 18 0.81 Yes -22 0.75 Yes 48 85.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 84961049 + NM_025065 RPF1 1 0.37 0.68 32 3.45 0 33 5.42 No -4 0.92 Yes 29 0.71 Yes -23 0.72 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 84961566 + NM_025065 RPF1 1 0.12 0.24 15 -1.34 82.72 29 6.65 Yes 16 0.92 Yes 0 0 No -28 0.65 No 42 76.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 84961938 + NM_025065 RPF1 1 0.08 0.17 10 0.81 0 16 4.58 No 24 1.31 Yes 0 0 No -36 0.72 Yes 34 85.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 111306183 + NM_032194 RPF2 1 0.18 0.39 21 0.36 60.31 19 4.95 No 64 0.59 No 23 0.68 Yes -24 0.65 No 46 39.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 111306212 + NM_032194 RPF2 1 0.33 0.56 30 -5.07 0 35 4.33 No -3 0.26 No 0 0 No -34 0.43 No 43 59.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 111310190 + NM_032194 RPF2 1 0.05 0.17 10 10.66 92.55 38 6.77 Yes 16 1.2 Yes 31 0.58 Yes -28 0.55 No 42 45.64 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 111312194 + NM_032194 RPF2 1 0.18 0.38 21 9.11 86.03 25 6.83 Yes 35 0.76 No 0 0 No -24 0.85 Yes 46 74.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 111315863 + NM_032194 RPF2 1 0.06 0.17 8 8.86 89.5 28 5.52 No 15 0.73 No 0 0 No -19 0.57 No 51 57.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 111317034 + NM_032194 RPF2 1 0.18 0.47 22 8.62 82.57 27 5.74 Yes 48 0.82 Yes 0 0 No -29 0.52 No 46 48.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 111317205 + NM_032194 RPF2 1 0.17 0.39 21 7.55 83.48 21 5.66 Yes 8 1.16 Yes 0 0 No -20 0.61 No 50 81.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 111318186 + NM_032194 RPF2 1 0.55 1.28 46 6.23 85.02 28 6.93 Yes 15 0.66 No 0 0 No -27 0.95 Yes 43 96.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 111331351 + NM_032194 RPF2 1 0.08 0.22 13 11.24 88.27 37 8.22 Yes 24 1.54 Yes 0 0 No -36 0.92 Yes 34 93.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 111333034 + NM_032194 RPF2 1 0.07 0.26 16 8.43 75.7 39 5.83 Yes 23 0.91 Yes 0 0 No -21 0.48 No 49 54.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 111341441 + NM_032194 RPF2 1 0.26 0.74 33 -2.14 86.82 25 6.71 Yes 12 1.81 Yes 0 0 No -24 0.89 Yes 46 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 38131843 - NM_000328 RPGR 1 0.49 0.14 9 3.17 84.41 27 4.1 No 34 -1.5 No 0 0 No -27 0.82 Yes 43 89.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 38156615 - NM_000328 RPGR 1 2.2 0.13 9 7.93 80.93 47 6.92 Yes 56 -1.48 No 0 0 No -42 0.25 No 39 36.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 38170024 - NM_000328 RPGR 1 8.22 0.67 32 5.59 81.61 28 7.91 Yes 15 1.17 Yes 0 0 No -27 0.9 Yes 43 88.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 38177147 - NM_000328 RPGR 1 0.72 0.1 7 5.36 82.01 45 7.42 Yes 32 0.39 No 0 0 No -44 0.45 No 30 65.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 53641162 - NM_015272 RPGRIP1L 1 2.96 0.33 17 6.68 89.78 24 3.67 No 0 1.06 Yes 0 0 No -23 0.85 Yes 47 88.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53641907 - NM_015272 RPGRIP1L 1 2.1 0.29 17 11.71 88.44 26 6.13 Yes 13 1.1 Yes 0 0 No -25 0.83 Yes 45 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 53706926 - NM_015272 RPGRIP1L 1 0.71 0.13 7 2.76 78.25 28 5.66 Yes 22 0.36 No 0 0 No -27 0.73 Yes 43 71.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 53734639 - NM_015272 RPGRIP1L 1 1.7 0.22 13 3.71 0 24 4.97 No 11 0.12 No 24 0.68 Yes -28 0.77 Yes 42 89.53 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 89002584 + NM_144563 RPIA 1 0.05 0.11 7 10.1 87.65 31 6.55 Yes 18 0.91 Yes 0 0 No -30 0.79 Yes 40 84.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 89012406 + NM_144563 RPIA 1 0.53 1.03 47 10.37 87.44 79 8.54 Yes 66 0.52 No 0 0 No -27 0.81 Yes 43 57.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 89034719 + NM_144563 RPIA 1 0.43 0.71 33 8.84 81.3 42 6.6 Yes 64 0.83 Yes 0 0 No -28 0.94 Yes 42 96.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 89045249 + NM_144563 RPIA 1 0.13 0.21 12 10.5 83.44 28 5.74 Yes 37 1.53 Yes 0 0 No -27 0.85 Yes 43 70.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153627835 + NM_001303626 RPL10 1 0 0.24 14 -6.67 0 11 4.12 No 11 1.38 Yes 0 0 No -29 0.57 No 30 76.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 153628144 + NM_001303626 RPL10 1 0 0.5 28 -11.16 0 31 8.27 Yes 18 1.74 Yes 0 0 No -30 0.96 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 153629057 + NM_001303626 RPL10 1 0.09 6.11 72 -1.42 71.53 18 4.9 No 29 2.15 Yes 0 0 No -41 0.66 No 29 79.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 153629060 + NM_001303626 RPL10 1 0.01 0.39 21 -5.57 57.45 21 5.2 No 32 2.14 Yes 0 0 No -44 0.64 No 26 76.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 153629075 + NM_001303626 RPL10 1 0 0.17 11 -4.83 58.09 23 4.9 No 47 2.14 Yes 0 0 No -59 0.68 Yes 11 56.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 35436373 + NM_007104 RPL10A 1 0.09 2.15 61 9 87.21 37 6.48 Yes 24 -0.55 No 0 0 No -36 0.91 Yes 34 62.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 35436578 + NM_007104 RPL10A 1 0.72 16.64 72 3.57 80.39 30 6 Yes 17 1.61 Yes 0 0 No -29 0.89 Yes 41 89.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35437091 + NM_007104 RPL10A 1 0.01 0.46 22 3.13 76.8 27 5.74 Yes 56 -4.02 No 0 0 No -26 0.73 Yes 42 33.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 35437117 + NM_007104 RPL10A 1 0 0.15 8 4.37 78.8 20 5.92 Yes 59 -2.15 No 29 0.85 Yes -19 0.76 Yes 51 79.99 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 35437209 + NM_007104 RPL10A 1 0.01 0.36 18 0.21 65.25 30 6 Yes 17 1.07 Yes 0 0 No -29 0.82 Yes 41 80.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35437212 + NM_007104 RPL10A 1 0.07 3.74 67 -1.67 61.52 33 6.24 Yes 20 1.08 Yes 0 0 No -32 0.82 Yes 38 82.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35438024 + NM_007104 RPL10A 1 0.01 0.72 32 3.39 78.19 32 5.56 Yes 45 0.72 No 0 0 No -31 0.66 No 39 36.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 24019101 + NM_000975 RPL11 1 14.08 230.5 72 5.3 83.93 27 6.48 Yes 14 1.56 Yes 0 0 No -26 0.94 Yes 44 89.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24020300 + NM_000975 RPL11 1 0.03 1.94 59 1.37 0 30 7.52 Yes 17 1.96 Yes 0 0 No -29 0.77 Yes 41 82.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24021215 + NM_000975 RPL11 1 0 0.1 7 5.6 84.11 32 5.01 No 37 -2.74 No 0 0 No -31 0.84 Yes 39 81.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 24022261 + NM_000975 RPL11 1 0 0.17 10 -0.54 0 17 4.12 No 32 0.92 Yes 23 0.92 Yes -37 0.37 No 25 61.97 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 24022298 + NM_000975 RPL11 1 0 0.19 12 -3.55 0 21 4.47 No 69 0.91 Yes 0 0 No -34 0.88 Yes 36 87.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130210004 - NM_000976 RPL12 1 0 0.31 19 -10.79 74.19 25 9.17 Yes 12 1.41 Yes 0 0 No -24 0.74 Yes 46 83.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130211657 - NM_000976 RPL12 1 0 0.33 19 -3.68 0 14 3.53 No 44 0.36 No 21 0.94 Yes -24 0.71 Yes 46 90.5 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 130211801 - NM_000976 RPL12 1 0.02 1.29 47 2.26 82.26 21 4.9 No 8 0.42 No 0 0 No -20 0.81 Yes 50 76.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89628703 + NM_033251 RPL13 1 0 0.17 9 -3.28 0 22 4.58 No 60 -4.1 No 22 0.89 Yes -21 0.6 No 31 32.64 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 89628743 + NM_033251 RPL13 1 0 0.13 8 -5.8 0 23 6.67 Yes 10 1.03 Yes 23 0.71 Yes -23 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 49991808 + NM_012423 RPL13A 1 0.01 0.47 27 7.03 91.39 22 4.3 No 9 0.27 No 0 0 No -29 0.64 No 41 55.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49991970 + NM_012423 RPL13A 1 0 0.21 13 5.37 82.14 18 4.84 No 27 0.65 No 0 0 No -21 0.55 No 49 61.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49993169 + NM_012423 RPL13A 1 0 0.17 9 5.99 77.25 51 7.07 Yes 38 0.24 No 0 0 No -50 0.47 No 27 30.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49993736 + NM_012423 RPL13A 1 0.03 4.56 71 0.16 0 26 6.24 Yes 13 1.63 Yes 0 0 No -25 0.95 Yes 45 95.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49993757 + NM_012423 RPL13A 1 0 0.57 30 2.67 74.91 25 5.48 No 34 1.61 Yes 25 0.47 Yes -28 0.49 No 46 52.27 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 49994987 + NM_012423 RPL13A 1 0.13 17.56 72 -3.16 77.21 33 7.68 Yes 20 2.09 Yes 0 0 No -32 0.81 Yes 38 84.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49995000 + NM_012423 RPL13A 1 0 0.58 30 -4.26 66.22 11 4.69 No 33 2.06 Yes 0 0 No -45 0.81 Yes 25 85.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 40502907 + NM_001034996 RPL14 1 0 0.22 10 0.7 0 13 4.36 No 30 0.94 Yes 0 0 No -35 0.57 No 35 73.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 40503099 + NM_001034996 RPL14 1 0.03 1.5 51 -14.76 0 31 6.62 Yes 18 0.54 No 0 0 No -30 0.59 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 40503102 + NM_001034996 RPL14 1 0 0.13 8 -3.66 0 34 6.84 Yes 21 0.54 No 0 0 No -33 0.58 No 43 54.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 40503403 + NM_001034996 RPL14 1 0 0.17 9 -0.98 54.92 44 6.16 Yes 43 0.74 No 28 0.53 Yes -31 0.26 No 35 34.87 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 40503431 + NM_001034996 RPL14 1 0.02 0.89 42 -5.67 72.79 31 6 Yes 71 0.74 No 28 0.53 Yes -30 0.35 No 51 44.86 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 40503437 + NM_001034996 RPL14 1 0.03 1.36 51 -10.97 0 11 3.87 No 24 0.58 No 0 0 No -42 0.36 No 45 61.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 23959946 + NM_001253380 RPL15 1 0.01 0.25 12 2.96 76.98 14 5 No 27 1.31 Yes 0 0 No -39 0.68 Yes 31 82.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 23959953 + NM_001253380 RPL15 1 0 0.24 15 -17.95 0 16 4 No 34 1.31 Yes 0 0 No -46 0.48 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 23960031 + NM_001253380 RPL15 1 0 0.1 7 2.78 68.45 33 5.74 Yes 20 0.35 No 0 0 No -32 0.82 Yes 38 92.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 23960644 + NM_001253380 RPL15 1 0 0.29 11 8.17 80.58 27 6.05 Yes 2 1.67 Yes 26 0.95 Yes -26 0.64 No 44 52.19 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 49118704 - NM_001270490 RPL18 1 0.02 1.01 42 -12.31 0 22 6.46 Yes 9 1.79 Yes 0 0 No -21 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 49118739 - NM_001270490 RPL18 1 0.01 0.6 19 2.3 75.29 48 7.21 Yes 35 0.21 No 20 0.89 Yes -47 0.85 Yes 23 90.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 49119203 - NM_001270490 RPL18 1 0 0.19 13 -0.93 0 28 6.86 Yes 15 2.03 Yes 25 0.68 Yes -27 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 49119478 - NM_001270490 RPL18 1 0.04 2.43 65 -0.73 74.96 26 5 No -3 1.39 Yes 25 0.9 Yes -25 0.85 Yes 45 78.19 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 17972233 + NM_000980 RPL18A 1 0.05 0.81 33 5.01 82.1 30 5.96 Yes 32 0.32 No 30 0.27 Yes -29 0.4 No 40 52.24 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 17972904 + NM_000980 RPL18A 1 0 0.14 8 -19.59 0 31 7.81 Yes 18 1.31 Yes 0 0 No -30 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 37358577 + NM_001330200 RPL19 1 0 0.13 7 -2.19 0 11 4.12 No 20 1.22 Yes 0 0 No -32 0.91 Yes 38 91.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37360302 + NM_001330200 RPL19 1 0.03 3.57 68 3.61 70.47 32 5.31 No 4 1.47 Yes 18 0.63 Yes -31 0.69 Yes 39 76.73 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 37360552 + NM_001330200 RPL19 1 0 0.17 10 2.9 0 18 4.36 No 10 0.25 No 0 0 No -16 0.48 No 48 66.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 37360729 + NM_001330200 RPL19 1 0 0.31 17 9.19 79.52 38 6.08 Yes 48 -1.81 No 0 0 No -32 0.31 No 32 51.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 37360784 + NM_001330200 RPL19 1 0 0.39 24 -3.44 0 13 4 No 21 2.27 Yes 0 0 No -33 0.81 Yes 37 90.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 27827765 + NM_000982 RPL21 1 0 0.13 8 8.67 80.12 24 5.03 No 16 0.64 No 0 0 No -28 0.63 No 42 68.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 27828359 + NM_000982 RPL21 1 0.01 0.76 32 -15.71 74.81 28 6.22 Yes 15 0.55 No 0 0 No -27 0.93 Yes 43 96.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6246771 - NM_000983 RPL22 1 0.09 1.83 57 5.71 84.85 21 4.24 No 63 -5.26 No 0 0 No -20 0.77 Yes 50 81.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6246899 - NM_000983 RPL22 1 0.02 0.39 20 -12.43 0 22 4.27 No 26 0.26 No 29 0.43 Yes -48 0.41 No 22 51.72 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 6246904 - NM_000983 RPL22 1 0.02 0.39 16 -1.26 62.79 17 4.6 No 21 0.25 No 29 0.43 Yes -43 0.54 No 27 50.6 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 6249351 - NM_000983 RPL22 1 0.02 0.36 23 2.86 79.59 26 5.97 Yes 13 0.87 Yes 0 0 No -25 0.73 Yes 45 82.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6253109 - NM_000983 RPL22 1 0.01 0.61 34 -6.09 0 11 3.87 No 33 0.15 No 0 0 No -32 0.77 Yes 38 93.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6257815 - NM_000983 RPL22 1 0.02 0.24 15 -9.76 0 44 7.96 Yes 31 1.9 Yes 0 0 No -32 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 6257816 - NM_000983 RPL22 1 0.03 0.32 17 -12.38 0 43 7.92 Yes 30 1.91 Yes 0 0 No -31 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 6258857 - NM_000983 RPL22 1 0.01 0.19 12 -5.57 59.11 77 11.04 Yes 64 1.36 Yes 0 0 No -9 0.34 No 61 29.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 6258970 - NM_000983 RPL22 1 0.02 0.26 14 8.82 78.02 34 6 Yes 69 -2 No 0 0 No -33 0.79 Yes 37 73.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 170585921 - NM_001320451 RPL22L1 1 0.02 0.29 14 -10 64.25 33 6.24 Yes 72 0.87 Yes 0 0 No -32 0.64 No 38 61.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 170585951 - NM_001320451 RPL22L1 1 0.01 0.21 12 6.32 78.01 25 4.9 No 47 1.2 Yes 29 0.5 Yes -21 0.53 No 49 71.08 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 170585977 - NM_001320451 RPL22L1 1 0.02 0.25 14 2.98 70.2 23 4.49 No 21 1.19 Yes 28 0.39 Yes -33 0.68 Yes 37 70.08 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 170585991 - NM_001320451 RPL22L1 1 2.9 46.74 72 3.67 0 20 4.53 No 7 1.18 Yes 19 0.81 Yes -19 0.73 Yes 51 78.44 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 170586180 - NM_001320451 RPL22L1 1 1063.15 806.13 72 5.07 78.94 21 5.88 Yes 30 0.22 No 23 0.74 Yes -23 0.82 Yes 47 85.48 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 37006453 - NM_000978 RPL23 1 0.06 5.53 71 5.38 92.91 22 4.89 No 54 0.7 No 0 0 No -21 0.71 Yes 49 70.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37006467 - NM_000978 RPL23 1 0 0.11 7 -4.26 0 53 8.76 Yes 40 0.72 No 0 0 No -31 0.63 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 37006471 - NM_000978 RPL23 1 0 0.13 8 -2.04 0 49 8.56 Yes 36 0.72 No 30 0.7 Yes -27 0.63 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 37006481 - NM_000978 RPL23 1 0 0.17 11 0.32 0 39 8.27 Yes 26 0.74 No 30 0.7 Yes -25 0.4 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 37006717 - NM_000978 RPL23 1 0.01 0.81 36 -2.24 0 15 4.58 No 26 1.64 Yes 0 0 No -38 0.76 Yes 32 86.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37006720 - NM_000978 RPL23 1 0.01 1.57 56 -0.72 0 12 4.24 No 23 1.65 Yes 0 0 No -35 0.76 Yes 35 87.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 37009365 - NM_000978 RPL23 1 0 0.13 9 2.78 0 33 6.76 Yes 20 1.36 Yes 30 0.83 Yes -32 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 166408 - NR_003572 RPL23AP53 1 48.38 3.08 64 5.79 78.68 25 6.79 Yes 5 1.69 Yes 0 0 No -24 0.86 Yes 46 93.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 166408 - NR_003572 RPL23AP53 1 2.33 0.11 7 5.79 78.68 25 6.79 Yes 5 1.69 Yes 0 0 No -24 0.86 Yes 46 93.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 166448 - NR_003572 RPL23AP53 1 5.45 0.32 14 3.33 67.2 59 7.46 Yes 14 1.46 Yes 0 0 No -26 0.83 Yes 44 80.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 114379594 - NR_024528 RPL23AP7 1 1.91 0.86 35 4.86 91.73 50 7.08 Yes 37 1.33 Yes 0 0 No -32 0.52 No 38 82.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 114379597 - NR_024528 RPL23AP7 1 2.44 1.04 32 4.41 89.94 47 6.88 Yes 34 1.34 Yes 0 0 No -29 0.72 Yes 41 85.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 114379739 - NR_024528 RPL23AP7 1 73.51 36.51 72 9.32 76.58 28 6.62 Yes 15 1.46 Yes 0 0 No -27 0.89 Yes 43 95.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 51223852 + NR_026981 RPL23AP82 1 0.38 0.15 8 8.58 90.72 25 5.29 No 12 0.33 No 0 0 No -24 0.79 Yes 46 76.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 51227177 + NR_026981 RPL23AP82 1 4.03 1.63 54 9.32 76.58 28 6.62 Yes 15 1.46 Yes 27 0.9 Yes -27 0.89 Yes 43 95.34 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 51227319 + NR_026981 RPL23AP82 1 5.28 2.18 60 4.41 89.94 47 6.88 Yes 34 1.34 Yes 29 0.88 Yes -29 0.72 Yes 41 85.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 51227322 + NR_026981 RPL23AP82 1 0.89 0.38 21 4.86 91.73 50 7.08 Yes 37 1.33 Yes 29 0.88 Yes -32 0.52 No 38 82.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 101400677 - NM_000986 RPL24 1 0 0.19 11 8.1 84.31 55 7.75 Yes 42 0.61 No 0 0 No -54 0.54 No 16 43.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 101401188 - NM_000986 RPL24 1 0.02 1.19 43 4.45 84.95 27 5.2 No 75 0.22 No 0 0 No -26 0.81 Yes 44 68.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 101401327 - NM_000986 RPL24 1 0 0.29 18 -7.17 0 20 4.33 No 33 0.38 No 0 0 No -30 0.73 Yes 40 80.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 101401354 - NM_000986 RPL24 1 0.03 1.99 52 2.65 77.74 19 4.9 No 6 0.39 No 20 0.88 Yes -25 0.82 Yes 45 55.23 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 101401369 - NM_000986 RPL24 1 0 0.19 8 -15.42 0 11 4.12 No 47 0.05 No 20 0.88 Yes -29 0.36 No 41 38.49 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 101401748 - NM_000986 RPL24 1 0.02 1.26 51 -4.33 0 20 4.71 No 7 1.25 Yes 0 0 No -31 0.8 Yes 39 90.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 101401755 - NM_000986 RPL24 1 0 0.15 11 -2.54 0 13 4.25 No 0 1.33 Yes 27 0.89 Yes -24 0.79 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 101404764 - NM_000986 RPL24 1 0.01 0.44 22 0.79 0 17 4.24 No 21 1.09 Yes 24 0.8 Yes -33 0.55 No 37 78.27 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 8280997 - NM_000987 RPL26 1 0 0.28 17 2.19 72.55 9 4.8 No 45 0.33 No 26 0.56 Yes -50 0.58 No 20 60.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 8281035 - NM_000987 RPL26 1 0 0.26 16 -18.62 0 12 2.98 No 7 0.29 No 26 0.56 Yes -48 0.86 Yes 22 58.76 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 8281043 - NM_000987 RPL26 1 0 0.42 24 2.57 70.5 12 4.59 No -1 0.33 No 40 0.12 Yes -40 0.9 Yes 30 83.65 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 8281056 - NM_000987 RPL26 1 0 0.58 19 8.75 77.43 28 7.35 Yes 15 0.27 No 40 0.12 Yes -27 0.89 Yes 43 83.54 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 8281963 - NM_000987 RPL26 1 0.08 10.58 72 8.55 78.42 30 5.97 Yes 43 1.09 Yes 0 0 No -23 0.61 No 41 61.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 8283207 - NM_000987 RPL26 1 0.01 0.89 40 -10.48 0 12 4.12 No 49 0.07 No 0 0 No -12 0.18 No 58 20.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 8283254 - NM_000987 RPL26 1 0.01 0.75 34 -3.9 0 44 6.28 Yes 31 0.87 Yes 0 0 No -32 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 8283955 - NM_000987 RPL26 1 0 0.11 8 4.26 73.64 23 5.1 No 10 0.41 No 0 0 No -23 0.41 No 51 36.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 8284022 - NM_000987 RPL26 1 0 0.31 15 0.3 72.97 40 7.32 Yes 18 0.76 No 22 0.94 Yes -22 0.67 Yes 48 64.87 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 8285409 - NM_000987 RPL26 1 0 0.13 8 3.07 74.75 61 5.74 Yes 9 0.53 No 21 0.77 Yes -21 0.72 Yes 49 64.13 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 8285594 - NM_000987 RPL26 1 0 0.22 13 2.7 67.04 33 5.36 No 41 0.96 Yes 0 0 No -25 0.67 Yes 45 48.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 8285623 - NM_000987 RPL26 1 0 0.33 19 -5.66 0 18 4.14 No 12 0.96 Yes 0 0 No -37 0.69 Yes 29 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8285657 - NM_000987 RPL26 1 0.01 0.65 29 1.79 76.73 19 5 No 74 -2.1 No 21 0.82 Yes -21 0.49 No 49 67.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 8286317 - NM_000987 RPL26 1 0.02 1.28 42 5.1 80.17 24 6.93 Yes -4 -0.85 No 0 0 No -23 0.83 Yes 47 69.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 172395465 + NM_001317982 RPL26L1 1 0.11 0.26 17 1.38 0 40 6.4 Yes 61 1.46 Yes 0 0 No -40 0.69 Yes 36 58.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41150739 + NM_000988 RPL27 1 0.01 0.47 24 2.39 66.21 14 4.53 No 72 -2.91 No 28 0.88 Yes -35 0.6 No 35 74.17 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 41150766 + NM_000988 RPL27 1 0.01 0.65 29 -13.41 0 30 5.82 Yes 17 0.3 No 0 0 No -29 0.77 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41151918 + NM_000988 RPL27 1 0 0.13 8 -4.55 0 14 4.12 No 13 0.09 No 25 0.81 Yes -25 0.37 No 45 75.27 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 41151971 + NM_000988 RPL27 1 0 0.15 9 1.93 72.97 29 5.49 No 26 0.75 No 0 0 No -28 0.58 No 23 72.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41154651 + NM_000988 RPL27 1 0.01 0.31 13 -2.14 0 18 4.42 No 64 0.57 No 27 0.94 Yes -16 0.38 No 54 27.15 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 8704734 + NM_000990 RPL27A 1 0.01 0.22 12 -1.54 66.89 24 4.8 No 11 0.95 Yes 22 0.95 Yes -23 0.83 Yes 47 53.43 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 8705409 + NM_000990 RPL27A 1 0.05 4.49 71 6.51 85.02 20 7.14 Yes 7 1.57 Yes 19 0.79 Yes -19 0.89 Yes 51 93.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 8705412 + NM_000990 RPL27A 1 0.01 1.03 40 4.73 83.01 23 7.35 Yes 10 1.55 Yes 0 0 No -22 0.93 Yes 48 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 8705536 + NM_000990 RPL27A 1 0.01 1.26 47 2.08 64.55 18 5.29 No 67 1.67 Yes 22 0.8 Yes -24 0.47 No 53 38.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 55898652 + NM_001136134 RPL28 1 0.09 6.31 71 8.28 87.64 24 5.29 No 11 0.57 No 23 0.96 Yes -23 0.87 Yes 47 94.59 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 55899146 + NM_001136134 RPL28 1 0 0.11 7 2.78 69.17 28 5.18 No 29 -2.31 No 0 0 No -27 0.77 Yes 43 83.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 55899302 + NM_001136134 RPL28 1 0.03 1.99 60 -1.19 0 35 6 Yes 22 1.7 Yes 0 0 No -34 0.79 Yes 36 59.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 55899344 + NM_001136134 RPL28 1 0 0.11 8 -3.05 59.17 31 5.9 Yes 64 1.69 Yes 0 0 No -23 0.55 No 61 59.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52028139 - NM_000992 RPL29 1 0.01 0.42 22 -4.73 0 39 7.46 Yes NA NA NA 0 0 No -30 0.86 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52028142 - NM_000992 RPL29 1 0.01 0.43 23 -2.32 0 36 7.26 Yes 76 -2.03 No 0 0 No -27 0.89 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52028874 - NM_000992 RPL29 1 0.04 1.99 62 8.37 84.36 26 4.36 No 64 0.75 No 25 0.63 Yes -25 0.32 No 45 59.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 52029098 - NM_000992 RPL29 1 0 0.14 7 -19.61 0 13 4.24 No 35 0.83 Yes 0 0 No -48 0.39 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52029167 - NM_000992 RPL29 1 0 0.15 8 2.76 68.13 21 5.83 Yes 8 0.39 No 0 0 No -20 0.64 No 43 59.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52029480 - NM_000992 RPL29 1 0.07 2.38 62 2.45 0 9 3.87 No 21 1.85 Yes 0 0 No -33 0.55 No 37 67.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52029485 - NM_000992 RPL29 1 0.01 0.21 9 -2.67 0 23 4.86 No 16 1.87 Yes 0 0 No -28 0.58 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39709301 - NM_001033853 RPL3 1 0 0.21 13 5.81 82.46 20 4.9 No 28 1.26 Yes 0 0 No -46 0.61 No 24 69.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39710205 - NM_001033853 RPL3 1 0 0.21 12 -2.22 0 16 4.19 No 31 2.24 Yes 0 0 No -30 0.9 Yes 40 93.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39710223 - NM_001033853 RPL3 1 0 0.17 11 -3.2 0 26 4.89 No 13 2.22 Yes 21 0.93 Yes -25 0.62 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 39713695 - NM_001033853 RPL3 1 0 0.22 11 5.2 79.97 25 7 Yes 12 0.88 Yes 0 0 No -24 0.84 Yes 46 78.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99054947 - NM_000989 RPL30 1 2.4 155.31 72 4.98 78.33 23 6.95 Yes 10 0.65 No 22 0.87 Yes -22 0.81 Yes 48 75.71 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 99054947 - NM_000989 RPL30 1 0 0.22 16 4.98 78.33 23 6.95 Yes 10 0.65 No 22 0.87 Yes -22 0.81 Yes 48 75.71 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 99054988 - NM_000989 RPL30 1 0 0.15 8 -18.59 55.94 20 4.91 No 48 0.2 No 22 0.87 Yes -40 0.74 Yes 30 59.8 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 99055013 - NM_000989 RPL30 1 0.01 0.47 27 -0.37 0 36 6.76 Yes 23 0.18 No 24 0.76 Yes -23 0.54 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 99057311 - NM_000989 RPL30 1 0.01 0.33 18 -6.44 0 15 3.87 No 9 0.64 No 0 0 No -34 0.74 Yes 36 73.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 99057315 - NM_000989 RPL30 1 0.02 1.24 45 -13.06 0 18 6.03 Yes 5 0.64 No 0 0 No -30 0.65 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 99057316 - NM_000989 RPL30 1 0.04 1.76 58 -14.49 0 17 5.95 Yes 4 0.64 No 0 0 No -29 0.73 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 99057343 - NM_000989 RPL30 1 0 0.17 10 -4.99 0 11 4.12 No 76 0.76 No 28 0.81 Yes -46 0.64 No 51 34.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 99057600 - NM_000989 RPL30 1 0 0.14 7 1.65 0 31 6.08 Yes 47 1.11 Yes 0 0 No -59 0.86 Yes 11 71.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99057627 - NM_000989 RPL30 1 0.01 0.28 16 0.79 0 33 8.52 Yes 20 1.15 Yes 0 0 No -32 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 99057638 - NM_000989 RPL30 1 0.06 2.15 64 -1.13 0 22 7.43 Yes 9 1.04 Yes 31 0.8 Yes -21 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 99057645 - NM_000989 RPL30 1 0.01 0.26 17 -3.31 0 28 6.23 Yes 2 0.9 Yes 31 0.8 Yes -27 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 101619141 + NM_001098577 RPL31 1 0.01 0.25 13 -2.56 67.69 15 5.25 No 2 0.78 Yes 25 0.42 Yes -23 0.92 Yes 47 87.35 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 101620577 + NM_001098577 RPL31 1 0.01 0.47 15 5.71 68.74 28 5.64 Yes 25 -2.49 No 27 0.73 Yes -27 0.7 Yes 53 54.47 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 101620620 + NM_001098577 RPL31 1 0.01 0.61 32 -6.65 0 50 7.1 Yes 37 0.85 Yes 0 0 No -28 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 101620629 + NM_001098577 RPL31 1 0 0.18 11 -6.7 0 19 4.36 No 46 0.84 Yes 0 0 No -58 0.47 No 33 64.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 101620632 + NM_001098577 RPL31 1 0 0.14 8 -6.53 55.05 22 4.69 No 49 0.84 Yes 0 0 No -40 0.3 No 30 56.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 101622397 + NM_001098577 RPL31 1 0 0.26 14 -3.02 72.85 21 4.69 No 57 -5.52 No 25 0.88 Yes -20 0.71 Yes 50 40.78 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 101622811 + NM_001098577 RPL31 1 20638.27 9715.76 72 10.09 90.66 20 7.94 Yes 7 1.38 Yes 19 0.76 Yes -19 0.88 Yes 51 89.94 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 101622819 + NM_001098577 RPL31 1 1.13 0.49 28 0.65 0 13 4.12 No 15 1.35 Yes 0 0 No -27 0.93 Yes 43 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 101627775 + NM_001098577 RPL31 1 1.04 0.49 28 6.64 82.99 27 5.2 No NA NA NA 0 0 No -23 0.74 Yes 47 67.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 101632079 + NM_001098577 RPL31 1 1.11 0.51 25 -0.44 59.44 22 8.9 Yes 9 0.94 Yes 0 0 No -39 0.56 No 31 77.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 101634320 + NM_001098577 RPL31 1 2.54 1.22 45 5.44 72.26 28 5.48 No 45 0.02 No 27 0.5 Yes -23 0.56 No 47 59.39 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 101634350 + NM_001098577 RPL31 1 6.74 3.01 65 6.06 81.47 25 4.3 No 75 0.02 No 24 0.63 Yes -24 0.82 Yes 46 85.68 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 101635475 + NM_001098577 RPL31 1 0.95 0.44 26 5.05 76.05 19 5 No 76 0.92 Yes 0 0 No -43 0.49 No 32 43.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 12877722 - NM_000994 RPL32 1 0 0.19 12 -13.68 0 23 6.69 Yes 10 1.26 Yes 0 0 No -22 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 12877726 - NM_000994 RPL32 1 0 0.14 9 -1.92 0 19 6.4 Yes 6 1.25 Yes 21 0.83 Yes -18 0.61 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 12877735 - NM_000994 RPL32 1 0 0.36 17 -1.16 0 28 5.83 Yes 49 0.97 Yes 21 0.83 Yes -27 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 12877769 - NM_000994 RPL32 1 0.01 0.89 37 0.29 66.09 28 7.21 Yes 15 0.96 Yes 0 0 No -27 0.97 Yes 43 96.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 12877812 - NM_000994 RPL32 1 0 0.15 10 -1.65 0 21 4.47 No 8 0.77 No 0 0 No -20 0.9 Yes 50 96.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 12880515 - NM_000994 RPL32 1 0 0.39 22 7.38 85.89 68 8.35 Yes 55 0.71 No 0 0 No -23 0.67 Yes 47 58.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 12880701 - NM_000994 RPL32 1 0.01 0.74 34 5.37 96.22 19 4.69 No 6 -0.77 No 0 0 No -26 0.5 No 52 61.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 12881084 - NM_000994 RPL32 1 0.01 0.49 23 8.32 76.03 30 8.16 Yes 17 0.3 No 29 0.9 Yes -29 0.89 Yes 41 93.57 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 129104909 - NR_003111 RPL32P3 1 4.9 0.18 11 9.49 88.5 29 5.14 No 16 0.22 No 0 0 No -23 0.83 Yes 47 81.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 129108940 - NR_003111 RPL32P3 1 35.76 0.86 37 5.18 80.21 24 6.07 Yes 63 -3.38 No 0 0 No -23 0.54 No 47 60.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 129109239 - NR_003111 RPL32P3 1 6.79 0.15 11 6.47 84.12 21 4.94 No 57 -2.85 No 0 0 No -20 0.73 Yes 50 86.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 129112140 - NR_003111 RPL32P3 1 74.07 2 59 7.57 82.02 32 5.91 Yes 64 1.25 Yes 31 0.82 Yes -31 0.65 No 39 78.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 109543281 + NM_001319234 RPL34 1 0 0.14 9 0.96 64.95 31 5.48 No 26 2.03 Yes 0 0 No -46 0.48 No 24 86.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 109543303 + NM_001319234 RPL34 1 0 0.13 8 1.2 70.75 27 5.57 Yes 48 2.02 Yes 0 0 No -26 0.77 Yes 44 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 109543306 + NM_001319234 RPL34 1 0 0.17 11 1.31 72.97 30 5.83 Yes 51 2.02 Yes 0 0 No -29 0.75 Yes 41 80.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 109546241 + NM_001319234 RPL34 1 0 0.31 11 -3.8 46.83 59 8.89 Yes 46 1.66 Yes 21 0.78 Yes -38 0.8 Yes 32 80.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 109546253 + NM_001319234 RPL34 1 0 0.25 13 0.04 0 16 4.58 No 58 1.64 Yes 21 0.78 Yes -50 0.28 No 44 28.27 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 109546290 + NM_001319234 RPL34 1 0 0.17 11 -3.47 0 10 4 No 16 0.38 No 0 0 No -28 0.77 Yes 42 80.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127620341 - NM_007209 RPL35 1 0 0.21 12 -7.31 0 9 3.87 No 15 1.32 Yes 0 0 No -27 0.95 Yes 43 94.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127620386 - NM_007209 RPL35 1 0 0.15 8 -5.56 0 18 3.91 No 42 0.35 No 21 0.92 Yes -54 0.45 No 57 39.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 127620394 - NM_007209 RPL35 1 0 0.17 10 -4.09 0 15 4.58 No 34 0.35 No 0 0 No -46 0.68 Yes 24 51.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 127620415 - NM_007209 RPL35 1 0 0.4 24 3.35 76.35 26 5.66 Yes 13 0.22 No 0 0 No -25 0.8 Yes 45 89.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127620817 - NM_007209 RPL35 1 0.08 8.32 72 2.44 77.61 20 5.1 No 76 -4.67 No 19 0.73 Yes -19 0.87 Yes 51 81.11 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 127621012 - NM_007209 RPL35 1 0 0.11 7 0.82 73.55 16 4.69 No 71 0.12 No 0 0 No -25 0.45 No 45 64.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 127623407 - NM_007209 RPL35 1 0 0.11 7 7.97 80.15 29 4.48 No 1 0.31 No 0 0 No -28 0.63 No 42 88.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 127623834 - NM_007209 RPL35 1 0 0.1 7 -7.32 0 26 5.66 Yes 13 0.63 No 0 0 No -25 0.84 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 197680358 + NM_001316311 RPL35A 1 0.01 0.89 40 6.14 87.15 28 4.42 No 4 0.9 Yes 27 0.76 Yes -27 0.83 Yes 43 74.82 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 197680385 + NM_001316311 RPL35A 1 0 0.1 7 5.36 82.76 19 6 Yes 6 1.16 Yes 0 0 No -29 0.7 Yes 41 85.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 197680477 + NM_001316311 RPL35A 1 0 0.19 12 10.4 83.51 33 5.46 No 20 0.89 Yes 0 0 No -24 0.84 Yes 46 80.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 197680839 + NM_001316311 RPL35A 1 0.02 1.58 42 3.14 71.98 29 6.2 Yes 10 0.32 No 36 0.61 Yes -28 0.77 Yes 42 72.91 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 197680881 + NM_001316311 RPL35A 1 0.01 0.67 30 -4.64 0 16 4.08 No 52 0.32 No 0 0 No -47 0.78 Yes 23 74.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50085845 - NM_001001 RPL36AL 1 0.09 1.33 49 2.87 83.89 22 4.8 No 37 1.32 Yes 0 0 No -21 0.51 No 52 54.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50085869 - NM_001001 RPL36AL 1 0.01 0.14 9 -2.99 0 26 7.61 Yes 13 1.34 Yes 35 0.72 Yes -25 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 50085871 - NM_001001 RPL36AL 1 0.01 0.11 8 -0.26 0 24 7.48 Yes 11 1.34 Yes 35 0.72 Yes -23 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 50086321 - NM_001001 RPL36AL 1 0.19 2.71 56 5.46 87.96 21 5.8 Yes 33 0.92 Yes 0 0 No -20 0.58 No 50 44.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 40834343 - NM_000997 RPL37 1 0 0.14 8 -11.9 0 11 4.08 No 27 1.16 Yes 0 0 No -51 0.63 No 19 29.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 40834374 - NM_000997 RPL37 1 0 0.14 8 -6.2 0 21 6.31 Yes -4 1.23 Yes 26 0.65 Yes -20 0.54 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 40834734 - NM_000997 RPL37 1 0.01 0.92 23 -4.84 0 10 4 No 37 0.95 Yes 26 0.87 Yes -56 0.75 Yes 46 46.37 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 40834741 - NM_000997 RPL37 1 0.02 1.29 33 -9.78 0 13 4 No 30 0.95 Yes 26 0.87 Yes -49 0.55 No 53 41.64 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 40834785 - NM_000997 RPL37 1 0.02 1.53 10 5 77.69 25 6.59 Yes 57 0.46 No 0 0 No -24 0.83 Yes 46 92.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 217363958 + NM_000998 RPL37A 1 0.03 1.78 54 5.89 82.59 21 5.2 No 69 -5.5 No 27 0.78 Yes -20 0.75 Yes 50 59.6 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 217364354 + NM_000998 RPL37A 1 0 0.29 20 1.76 78.97 25 6.59 Yes 64 0.91 Yes 0 0 No -24 0.76 Yes 46 72.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 217364554 + NM_000998 RPL37A 1 0 0.1 7 -1.4 87.67 27 5.46 No 51 -2.35 No 26 0.82 Yes -24 0.55 No 41 66.29 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 217364648 + NM_000998 RPL37A 1 0.01 0.86 34 4.65 74.14 14 4.64 No 64 -3.13 No 27 0.91 Yes -27 0.43 No 43 47.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 217364677 + NM_000998 RPL37A 1 0 0.17 10 -4.5 0 11 3.87 No 15 0.03 No 0 0 No -33 0.6 No 37 87.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 217366048 + NM_000998 RPL37A 1 0 0.65 35 -5.17 0 46 5.74 Yes 58 0.26 No 31 0.63 Yes -25 0.42 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 217366088 + NM_000998 RPL37A 1 0 0.31 19 1.21 64.31 22 5.66 Yes 28 1.06 Yes 0 0 No -57 0.44 No 14 55.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 72205333 + NM_000999 RPL38 1 0.01 0.53 29 -5.13 0 15 4.11 No 13 1.3 Yes 0 0 No -32 0.53 No 33 46.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 72205951 + NM_000999 RPL38 1 0.01 0.89 40 0.18 0 12 4.24 No 19 0.99 Yes 22 0.94 Yes -31 0.95 Yes 39 96.41 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 118923963 - NM_001000 RPL39 1 0.03 1.11 44 0.28 0 15 4.58 No 18 0.67 No 0 0 No -45 0.59 No 35 47.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118923986 - NM_001000 RPL39 1 0.01 0.4 23 -3.97 0 23 5.81 Yes 26 -2.58 No 23 0.84 Yes -22 0.69 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 118923993 - NM_001000 RPL39 1 0 0.1 7 -2.01 0 16 5.48 No 3 0.14 No 23 0.84 Yes -15 0.76 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 66791989 - NM_000968 RPL4 1 0.01 0.6 24 -23.15 0 35 5.29 No 1 1.04 Yes 0 0 No -28 0.88 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 66791997 - NM_000968 RPL4 1 0.01 0.81 39 -2.53 0 27 4.84 No 8 1.07 Yes 26 0.96 Yes -20 0.65 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 66792030 - NM_000968 RPL4 1 0 0.33 13 0.99 0 12 4.19 No 0 -1.84 No 26 0.96 Yes -19 0.78 Yes 51 83.29 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 66792511 - NM_000968 RPL4 1 0.01 0.85 38 -3.92 0 28 5.48 No 15 0.77 Yes 27 0.38 Yes -27 0.75 Yes 43 67 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 66792532 - NM_000968 RPL4 1 0 0.13 9 0.75 69.1 25 4.49 No 65 0.9 Yes 23 0.93 Yes -25 0.43 No 52 47.7 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 66792686 - NM_000968 RPL4 1 0 0.19 10 -2.2 71.74 11 4.11 No 76 0.53 No 0 0 No -57 0.61 No 13 64.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 66793828 - NM_000968 RPL4 1 0 0.19 12 3.12 84.76 25 4.9 No 21 1.03 Yes 0 0 No -24 0.93 Yes 46 82.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66793842 - NM_000968 RPL4 1 0 0.14 8 -7.31 0 20 5.25 No 7 1.04 Yes 0 0 No -31 0.46 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56510948 + NM_001035267 RPL41 1 0 0.14 8 -1.1 0 41 6.6 Yes 28 1.5 Yes 29 0.82 Yes -31 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 56510977 + NM_001035267 RPL41 1 0.33 9.67 72 -5.9 0 70 8.5 Yes 57 1.55 Yes 0 0 No -60 0.79 Yes 10 89.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56510981 + NM_001035267 RPL41 1 0.25 7.1 71 -16.85 0 12 4.24 No 61 1.53 Yes 0 0 No -38 0.56 No 32 16.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56510984 + NM_001035267 RPL41 1 0 0.1 7 -19.5 0 15 4 No 64 1.53 Yes 0 0 No -41 0.42 No 29 10.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 93298958 + NM_000969 RPL5 1 0 0.19 8 -0.22 64.52 16 4.5 No 20 1.26 Yes 0 0 No -35 0.65 No 35 61.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 93299059 + NM_000969 RPL5 1 0.01 0.79 38 7.75 84.4 37 6.82 Yes 24 1.02 Yes 21 0.4 Yes -22 0.81 Yes 48 83.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 93299103 + NM_000969 RPL5 1 0.01 0.43 25 -2.9 86.85 18 6.45 Yes 68 1.01 Yes 0 0 No -21 0.78 Yes 49 70.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93299352 + NM_000969 RPL5 1 0.01 0.43 20 6.84 84.62 15 4.83 No 2 0.69 No 26 0.59 Yes -26 0.57 No 44 65.65 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 93299355 + NM_000969 RPL5 1 0.01 0.29 19 5.8 87.38 18 5.07 No 5 0.69 No 0 0 No -21 0.62 No 41 54.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 93301757 + NM_000969 RPL5 1 0.01 0.51 28 1.84 0 17 4.47 No 69 0.42 No 0 0 No -30 0.75 Yes 40 75.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93304610 + NM_000969 RPL5 1 0.01 0.65 35 11.28 93.23 27 5.66 Yes 65 -2.64 No 0 0 No -25 0.95 Yes 45 94.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 93306113 + NM_000969 RPL5 1 0.01 0.69 30 -9.76 0 9 3.87 No 65 -2.96 No 0 0 No -39 0.47 No 40 39.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112843185 - NM_001320142 RPL6 1 0 0.24 15 -0.81 0 14 6.1 Yes 1 0.54 No 27 0.77 Yes -22 0.44 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 112843717 - NM_001320142 RPL6 1 0 0.15 9 2.59 74.06 15 7.12 Yes 2 1.71 Yes 0 0 No -23 0.37 No 52 45.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112843821 - NM_001320142 RPL6 1 0 0.33 20 -6.14 63.73 24 5.48 No 29 1.17 Yes 0 0 No -41 0.42 No 29 45.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112843841 - NM_001320142 RPL6 1 0 0.17 10 -3.39 0 48 4.26 No 9 1.17 Yes 0 0 No -21 0.59 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112844145 - NM_001320142 RPL6 1 0 0.11 8 -9.61 75.75 26 6.34 Yes 13 1.02 Yes 0 0 No -25 0.9 Yes 45 94.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 112844607 - NM_001320142 RPL6 1 0 0.32 19 -14.82 0 14 4.47 No 66 -3.38 No 0 0 No -18 0.47 No 32 57.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112844618 - NM_001320142 RPL6 1 0.01 0.53 21 -12.6 0 15 2.95 No 55 -3.38 No 0 0 No -14 0.51 No 43 49.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112844626 - NM_001320142 RPL6 1 0 0.15 9 -5.63 0 28 5.8 Yes 47 -3.37 No 0 0 No -27 0.51 No 51 32.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112844629 - NM_001320142 RPL6 1 0 0.15 7 -19.62 0 25 5.54 No 44 -3.37 No 0 0 No -24 0.52 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112844651 - NM_001320142 RPL6 1 0 0.22 11 -13.6 0 13 4.12 No 74 0.65 No 0 0 No -29 0.48 No 28 43.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 112844683 - NM_001320142 RPL6 1 0 0.11 7 -20.03 0 17 3.93 No 66 1.31 Yes 0 0 No -14 0.38 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112844690 - NM_001320142 RPL6 1 0 0.1 7 -1.69 0 31 4.2 No 59 1.3 Yes 0 0 No -35 0.65 No 35 47.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112844874 - NM_001320142 RPL6 1 0 0.32 19 9.24 96.06 27 5.25 No 50 1.14 Yes 26 0.79 Yes -34 0.65 No 36 87.57 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 74203494 - NM_000971 RPL7 1 0 0.13 8 -6.74 0 51 8.1 Yes -2 0.49 No 29 0.71 Yes -20 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 74203915 - NM_000971 RPL7 1 0 0.14 7 -6.08 0 22 4.82 No 0 1.17 Yes 30 0.83 Yes -21 0.83 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 74203932 - NM_000971 RPL7 1 0 0.26 15 2.13 0 21 4.58 No 61 0.94 Yes 30 0.83 Yes -26 0.42 No 44 60.85 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 74204632 - NM_000971 RPL7 1 0.01 1.01 41 -3.94 0 12 4.24 No 16 0.64 No 0 0 No -28 0.58 No 42 53.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 74204656 - NM_000971 RPL7 1 0 0.18 10 -6.83 0 27 4.41 No 37 -4.19 No 32 0.74 Yes -22 0.39 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 74205026 - NM_000971 RPL7 1 0 0.19 11 -15.83 0 15 4 No 18 0.96 Yes 0 0 No -30 0.46 No 40 53.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 74205029 - NM_000971 RPL7 1 0 0.15 9 -13.6 0 28 5.53 No 15 0.98 Yes 0 0 No -27 0.56 No 43 61.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 74205031 - NM_000971 RPL7 1 0.04 1.4 51 -10.79 70.81 26 5.4 No 13 0.99 Yes 26 0.8 Yes -25 0.54 No 45 65.28 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 74205227 - NM_000971 RPL7 1 0.05 1.57 52 7.64 79.54 22 5.27 No 69 -2.34 No 0 0 No -27 0.78 Yes 43 88.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 136216753 + NM_000972 RPL7A 1 0 0.18 8 -3.94 0 21 4.58 No -4 0.43 No 21 0.85 Yes -20 0.84 Yes 62 39.11 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr9 136216774 + NM_000972 RPL7A 1 0 0.11 8 -0.2 0 11 4.12 No 17 0.75 No 0 0 No -24 0.59 No 41 64.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 136216825 + NM_000972 RPL7A 1 0 0.15 8 -27.96 0 16 3.63 No 68 0.7 No 29 0.35 Yes -16 0.25 No 38 45.32 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 42848295 + NR_134562 RPL7L1 1 0.25 0.42 21 8.1 88.21 27 5.2 No 51 1.23 Yes 26 0.87 Yes -26 0.72 Yes 44 61.51 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 42848624 + NR_134562 RPL7L1 1 0.07 0.14 9 5.6 87.85 29 5.15 No 34 1.5 Yes 0 0 No -24 0.46 No 46 37.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 42851191 + NR_134562 RPL7L1 1 8.45 0.58 27 5.87 86.35 30 3.79 No 11 0.7 No 0 0 No -26 0.62 No 44 58.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42851191 + NR_134562 RPL7L1 1 6.93 0.19 10 5.87 86.35 30 3.79 No 11 0.7 No 0 0 No -26 0.62 No 44 58.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42851592 + NR_134562 RPL7L1 1 0.07 0.25 16 1.07 71.12 19 5 No 67 -4.33 No 21 0.57 Yes -18 0.7 Yes 52 35.92 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 42851595 + NR_134562 RPL7L1 1 0.3 1.14 38 2.78 82.54 22 5.29 No 70 -4.34 No 21 0.57 Yes -21 0.84 Yes 49 32.22 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 42853998 + NR_134562 RPL7L1 1 0.13 0.61 34 -0.73 0 34 5.49 No 47 -2.12 No 0 0 No -37 0.55 No 33 71.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 42854047 + NR_134562 RPL7L1 1 0.03 0.15 9 6.51 87.24 23 4.65 No 6 0.35 No 0 0 No -22 0.93 Yes 48 89.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 42854098 + NR_134562 RPL7L1 1 0.03 0.15 9 6.86 84.19 30 6.56 Yes 17 1.11 Yes 0 0 No -29 0.98 Yes 41 97.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42854658 + NR_134562 RPL7L1 1 1.09 0.38 21 -0.63 79.76 26 5.29 No 76 -5.14 No 0 0 No -25 0.89 Yes 45 67.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 42855005 + NR_134562 RPL7L1 1 0.63 0.22 15 9.93 90.84 21 5.13 No 31 -1.89 No 0 0 No -30 0.75 Yes 40 76.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 146015812 - NM_000973 RPL8 1 0 0.22 15 3.35 72.64 18 6.16 Yes 71 0.96 Yes 0 0 No -17 0.71 Yes 53 64.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 146015841 - NM_000973 RPL8 1 0.01 1.26 48 -6.94 70.21 20 4.9 No 42 0.96 Yes 0 0 No -35 0.58 No 35 41.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 146015874 - NM_000973 RPL8 1 0 0.21 11 -6.44 65.22 22 6.62 Yes 9 0.72 No 20 0.75 Yes -21 0.86 Yes 49 72.52 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 146016149 - NM_000973 RPL8 1 0.01 0.51 27 2.68 83.71 21 4.65 No 52 0.63 No 20 0.93 Yes -20 0.67 Yes 50 63.99 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 146016880 - NM_000973 RPL8 1 0 0.13 9 -12.97 0 29 7.54 Yes 8 1.73 Yes 0 0 No -28 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 39455832 - NM_000661 RPL9 1 0 0.13 7 2.39 82.47 19 4.72 No 37 0.43 No 0 0 No -39 0.9 Yes 31 96.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 39455867 - NM_000661 RPL9 1 0.01 1 39 2.74 71.5 15 5.48 No 49 -2.6 No 25 0.94 Yes -14 0.36 No 56 49.56 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 39456550 - NM_000661 RPL9 1 0 0.1 7 4.62 84.35 18 4.9 No 33 0.28 No 30 0.7 Yes -45 0.75 Yes 25 40.26 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr4 39456600 - NM_000661 RPL9 1 0.03 0.79 34 6.93 91.78 17 5.52 No 35 -1.34 No 30 0.7 Yes -22 0.7 Yes 48 68.65 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr4 39458099 - NM_000661 RPL9 1 0.02 1.35 51 4.9 84.9 27 6.79 Yes 14 1.42 Yes 0 0 No -26 0.95 Yes 44 94.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39459326 - NM_000661 RPL9 1 0.02 2.03 36 1.69 70.03 22 5.1 No 28 0.84 Yes 27 0.58 Yes -21 0.55 No 49 35.5 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 39459913 - NM_000661 RPL9 1 0 0.18 12 -0.48 77.33 15 5.09 No 27 1.65 Yes 0 0 No -39 0.81 Yes 31 92.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39460075 - NM_000661 RPL9 1 0 0.14 7 6.98 74.13 9 7 Yes -4 1.01 Yes 21 0.97 Yes -32 0.33 No 38 55.41 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 39460219 - NM_000661 RPL9 1 0.15 6.33 71 6.03 91.23 29 7.55 Yes 16 0.9 Yes 28 0.77 Yes -28 0.77 Yes 42 81.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120634732 - NM_001002 RPLP0 1 0 0.18 10 0.06 0 9 3.87 No 16 1.46 Yes 0 0 No -28 0.88 Yes 42 84.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120635233 - NM_001002 RPLP0 1 0 0.46 18 8.52 85.74 16 4.69 No 49 0.72 No 0 0 No -61 0.42 No 46 32.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 120635302 - NM_001002 RPLP0 1 0.01 1.04 34 8.75 88.09 45 5.52 No 16 1.25 Yes 28 0.9 Yes -28 0.83 Yes 42 88.63 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120635302 - NM_001002 RPLP0 1 0 0.17 10 8.75 88.09 45 5.52 No 16 1.25 Yes 28 0.9 Yes -28 0.83 Yes 42 88.63 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120636022 - NM_001002 RPLP0 1 0 0.57 27 9.85 91.79 19 7.07 Yes 6 1.28 Yes 0 0 No -18 0.71 Yes 52 85.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120636435 - NM_001002 RPLP0 1 0.39 47.1 72 3.45 82.13 49 7.62 Yes 27 1.16 Yes 39 0.65 Yes -39 0.8 Yes 31 70.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120636435 - NM_001002 RPLP0 1 0 0.28 18 3.45 82.13 49 7.62 Yes 27 1.16 Yes 39 0.65 Yes -39 0.8 Yes 31 70.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120636438 - NM_001002 RPLP0 1 0.08 9.78 72 2.35 72.63 46 7.45 Yes 24 1.17 Yes 39 0.65 Yes -36 0.78 Yes 34 76.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120636539 - NM_001002 RPLP0 1 0 0.25 15 -19.36 0 30 6.13 Yes 17 0.36 No 0 0 No -29 0.88 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 120636541 - NM_001002 RPLP0 1 0 0.22 14 -14.86 69.71 28 5.99 Yes 15 0.36 No 0 0 No -27 0.91 Yes 43 92.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 120636552 - NM_001002 RPLP0 1 0 0.19 12 -5.69 0 17 4.5 No 66 1.09 Yes 25 0.89 Yes -16 0.74 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 120636574 - NM_001002 RPLP0 1 0.03 4.11 65 9.73 84.78 32 5.82 Yes 44 1.07 Yes 31 0.55 Yes -31 0.74 Yes 39 66.09 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 120636603 - NM_001002 RPLP0 1 0.02 2.88 65 -4.62 0 20 4.36 No 15 1.05 Yes 27 0.91 Yes -27 0.76 Yes 43 92.47 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 120637008 - NM_001002 RPLP0 1 0.01 1.14 45 -13.44 0 30 6.07 Yes 24 0.68 No 0 0 No -29 0.81 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 120637023 - NM_001002 RPLP0 1 0 0.15 11 -2.03 0 22 4.52 No 9 0.66 No 28 0.82 Yes -20 0.75 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 120637226 - NM_001002 RPLP0 1 0 0.29 19 3.31 71.58 18 5.39 No 21 -2.22 No 0 0 No -47 0.42 No 17 58.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 120637229 - NM_001002 RPLP0 1 0.01 0.42 22 -2.41 62.16 15 5.1 No 18 -2.03 No 22 0.81 Yes -44 0.6 No 20 58.98 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 120637246 - NM_001002 RPLP0 1 0.01 0.93 42 1.86 69.96 31 7.14 Yes 61 0.96 Yes 22 0.81 Yes -27 0.66 No 37 53.28 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 120637954 - NM_001002 RPLP0 1 0.02 1.35 49 2.77 76.28 26 4.62 No 46 -2.07 No 25 0.81 Yes -23 0.73 Yes 45 64.47 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 120638366 - NM_001002 RPLP0 1 0.01 0.75 40 8.67 87.59 23 5 No 56 0.52 No 0 0 No -22 0.83 Yes 48 90.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 120638695 - NM_001002 RPLP0 1 14.48 402.17 72 8.49 81.25 26 6.78 Yes 45 0.64 No 25 0.67 Yes -25 0.63 No 45 68.94 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 120638732 - NM_001002 RPLP0 1 0.01 0.15 10 0.68 0 21 5.66 Yes 8 0.62 No 25 0.67 Yes -20 0.78 Yes 50 76.16 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 120638736 - NM_001002 RPLP0 1 0.02 0.42 25 3.84 68.62 17 5.29 No 4 0.63 No 25 0.67 Yes -16 0.53 No 54 72.75 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 69745672 + NM_001003 RPLP1 1 0.01 0.83 39 9.68 89.59 23 6.78 Yes 10 2.51 Yes 0 0 No -22 0.87 Yes 48 93.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 69745988 + NM_001003 RPLP1 1 0.01 1.57 55 -6.22 76.03 23 7.65 Yes 10 1.56 Yes 0 0 No -30 0.69 Yes 48 65.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 69745994 + NM_001003 RPLP1 1 0 0.17 10 -17.04 0 16 3.52 No 16 1.55 Yes 0 0 No -36 0.79 Yes 34 68.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 69746398 + NM_001003 RPLP1 1 0 0.18 10 1.82 83.92 45 6.5 Yes 32 0.3 No 0 0 No -38 0.54 No 32 47.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 810271 + NM_001004 RPLP2 1 0 0.22 14 7.74 71.8 41 6.82 Yes 59 1.46 Yes 0 0 No -30 0.53 No 40 37.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 810290 + NM_001004 RPLP2 1 0 0.36 17 3.42 80.45 14 5.29 No 47 -0.36 No 0 0 No -25 0.69 Yes 49 57.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 811575 + NM_001004 RPLP2 1 0 0.15 8 3.36 76.03 22 6.56 Yes 38 -2.02 No 25 0.93 Yes -22 0.77 Yes 48 53.64 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 811575 + NM_001004 RPLP2 1 0.02 1.81 45 3.36 76.03 22 6.56 Yes 38 -2.02 No 25 0.93 Yes -22 0.77 Yes 48 53.64 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 812729 + NM_001004 RPLP2 1 0 0.21 14 1.85 67.88 30 6.93 Yes 66 -4.51 No 25 0.96 Yes -29 0.82 Yes 41 66.24 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 812762 + NM_001004 RPLP2 1 0.97 62.1 72 5.78 81.59 29 6.48 Yes 16 1.64 Yes 0 0 No -28 0.97 Yes 42 96.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 128344519 - NM_002950 RPN1 1 0.02 0.13 9 -3.32 0 16 4.47 No 24 0.14 No 24 0.56 Yes -36 0.77 Yes 34 58.94 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 128359978 - NM_002950 RPN1 1 0.02 0.13 9 7.62 80.81 21 5.26 No 8 0.84 Yes 20 0.8 Yes -20 0.9 Yes 50 93.01 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 128363490 - NM_002950 RPN1 1 0.11 0.67 34 3.62 0 30 5.83 Yes 35 0.26 No 25 0.83 Yes -27 0.55 No 43 62.14 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 128363494 - NM_002950 RPN1 1 0.1 0.67 32 -0.46 83.92 26 5.48 No 31 0.27 No 25 0.83 Yes -23 0.6 No 45 61.29 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 128363821 - NM_002950 RPN1 1 0.03 0.19 11 -2.82 0 16 3.87 No 15 0.71 No 0 0 No -30 0.36 No 40 57.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 128364286 - NM_002950 RPN1 1 0.03 0.17 11 7.28 93.6 28 5.83 Yes 71 -2.09 No 0 0 No -25 0.41 No 45 51.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 128366360 - NM_002950 RPN1 1 0.08 0.46 23 8.18 94.82 28 5.27 No 15 0.47 No 0 0 No -27 0.87 Yes 43 94.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 35826803 + NM_001324301 RPN2 1 0.03 0.21 11 -1.76 0 24 6.01 Yes 11 1.44 Yes 0 0 No -30 0.52 No 40 72.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 35829954 + NM_001324301 RPN2 1 2.11 0.19 12 10.95 83.48 44 5.03 No 21 0.1 No 0 0 No -26 0.62 No 44 85.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 35832292 + NM_001324301 RPN2 1 5.88 0.56 24 2.94 0 33 7.15 Yes 20 0.41 No 0 0 No -32 0.96 Yes 38 96.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 35842204 + NM_001324301 RPN2 1 1.09 5.01 35 4.48 76.83 47 7.05 Yes 52 1.36 Yes 0 0 No -26 0.46 No 50 45.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 35844459 + NM_001324301 RPN2 1 0.47 3.42 67 8.79 85.81 21 5.43 No 8 0.81 Yes 0 0 No -30 0.66 No 50 74.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 35854066 + NM_001324301 RPN2 1 0.02 0.14 8 5.07 75.59 14 5.43 No 1 0.42 No 20 0.9 Yes -25 0.93 Yes 45 92.7 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 35856324 + NM_001324301 RPN2 1 0.08 0.76 34 5.82 76.6 36 6 Yes 67 1.05 Yes 0 0 No -29 0.64 No 41 82.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 35858356 + NM_001324301 RPN2 1 0.06 0.47 22 10.29 89.27 31 5.62 Yes 18 1.25 Yes 23 0.88 Yes -30 0.87 Yes 40 85.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 35858393 + NM_001324301 RPN2 1 0.07 0.6 26 -1.02 63.49 15 5.2 No 55 1.22 Yes 0 0 No -41 0.4 No 29 74.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 35869710 + NM_001324301 RPN2 1 18.41 1.57 54 2.97 0 35 6.71 Yes 22 1.37 Yes 0 0 No -34 0.61 No 36 72.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 58296016 + NM_001098783 RPP14 1 3.51 0.29 17 6.47 76.88 31 5.57 Yes -4 0.14 No 30 0.62 Yes -21 0.59 No 49 78.23 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 58301427 + NM_001098783 RPP14 1 0.51 0.47 27 6.18 82.74 50 7.76 Yes 37 0.44 No 25 0.53 Yes -36 0.51 No 34 66.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 58301448 + NM_001098783 RPP14 1 0.61 0.51 24 7.1 91.29 28 5.29 No 58 0.45 No 27 0.57 Yes -27 0.47 No 47 32.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 92636000 + NM_001104546 RPP30 1 0.47 0.92 37 10.96 85.14 93 9.84 Yes 15 1.5 Yes 0 0 No -27 0.79 Yes 43 76.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 92638821 + NM_001104546 RPP30 1 0.05 0.11 7 -8.19 80.44 24 7.93 Yes 11 1.11 Yes 0 0 No -23 0.57 No 47 68.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 92647325 + NM_001104546 RPP30 1 0.14 0.31 21 7.49 83.14 21 7.21 Yes 8 1.32 Yes 0 0 No -20 0.89 Yes 50 91.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 92647965 + NM_001104546 RPP30 1 0.15 0.29 13 6.42 70.86 44 6.3 Yes 15 1.13 Yes 0 0 No -27 0.76 Yes 43 67.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 92654510 + NM_001104546 RPP30 1 0.1 0.24 14 7.01 85.34 23 4.01 No 73 -4.33 No 23 0.93 Yes -17 0.51 No 53 59.51 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 92656071 + NM_001104546 RPP30 1 0.44 1 42 -5.51 76.18 36 7.05 Yes 3 1.02 Yes 22 0.67 Yes -24 0.5 No 35 64.78 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 92660303 + NM_001104546 RPP30 1 0.27 0.54 30 -0.77 0 49 7 Yes 28 0.81 Yes 27 0.4 Yes -31 0.65 No 39 75.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 92660303 + NM_001104546 RPP30 1 0.2 0.36 20 -0.77 0 49 7 Yes 28 0.81 Yes 27 0.4 Yes -31 0.65 No 39 75.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 92668039 + NM_001104546 RPP30 1 9.49 2.26 62 10.26 94.52 18 6.4 Yes 17 0.64 No 29 0.81 Yes -29 0.75 Yes 41 84.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 92668077 + NM_001104546 RPP30 1 5.06 1.25 44 10.45 95.27 28 6.59 Yes 55 0.63 No 0 0 No -27 0.65 No 43 68.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 33605642 - NM_001303411 RPRD1A 1 1.73 2.22 59 7.23 0 15 4.58 No 12 0.98 Yes 24 0.59 Yes -25 0.43 No 45 65.87 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 33607289 - NM_001303411 RPRD1A 1 0.12 0.15 9 2.68 80.02 21 5 No 8 0.44 No 18 0.73 Yes -25 0.63 No 45 65.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr18 33613765 - NM_001303411 RPRD1A 1 0.83 0.14 7 6.58 81.31 17 5.27 No 43 1.14 Yes 0 0 No -28 0.25 No 54 44.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 36665860 + NM_021215 RPRD1B 1 0.16 0.11 8 1.3 60.94 32 5.84 Yes 19 1.14 Yes 0 0 No -31 0.93 Yes 39 92.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36685939 + NM_021215 RPRD1B 1 1.84 1.78 54 0.79 0 9 3.87 No 25 1.08 Yes 0 0 No -33 0.49 No 33 61.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 36694542 + NM_021215 RPRD1B 1 0.13 0.18 11 3.13 84.73 22 5.2 No 60 0.63 No 0 0 No -20 0.6 No 50 53.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 36698626 + NM_021215 RPRD1B 1 1.38 1.67 59 8.52 89.95 42 6.97 Yes 1 1.01 Yes 0 0 No -38 0.84 Yes 32 85.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36712219 + NM_021215 RPRD1B 1 0.14 0.15 10 6.24 81.1 33 4.76 No 73 -4.09 No 0 0 No -30 0.85 Yes 40 80.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 36712234 + NM_021215 RPRD1B 1 0.21 0.22 14 3.41 81.51 22 4.9 No 9 0.71 No 0 0 No -21 0.86 Yes 49 79.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 36715098 + NM_021215 RPRD1B 1 0.12 0.14 10 10.68 83.35 32 5.71 Yes 11 1.86 Yes 0 0 No -23 0.86 Yes 47 84.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36716264 + NM_021215 RPRD1B 1 0.27 0.35 17 8.97 75.89 15 7.04 Yes 2 0.95 Yes 0 0 No -34 0.83 Yes 36 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36716708 + NM_021215 RPRD1B 1 0.18 0.21 13 11.02 93.67 18 5.46 No 51 1.57 Yes 0 0 No -24 0.83 Yes 46 89.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150381381 + NM_015203 RPRD2 1 0.19 0.18 13 7.31 89.91 22 5.64 Yes 9 0.57 No 21 0.78 Yes -21 0.74 Yes 49 89.72 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 150436898 + NM_015203 RPRD2 1 0.14 0.11 7 2.88 71.65 65 8.43 Yes 60 0.39 No 0 0 No -29 0.54 No 44 42.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 34392948 - NM_001014 RPS10 1 0.01 0.71 32 6.71 80.63 18 5.05 No 60 0.63 No 0 0 No -21 0.63 No 49 72.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 34393031 - NM_001014 RPS10 1 0 0.15 8 4.18 78.68 29 6.14 Yes 13 0.54 No 0 0 No -28 0.67 Yes 42 62.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 34393072 - NM_001014 RPS10 1 0.01 0.43 23 7.93 71.93 40 6.3 Yes 74 0.72 No 0 0 No -24 0.6 No 46 59.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 34389604 - NM_001202470 RPS10-NUDT3 1 0.01 0.4 21 7.96 81.93 21 5.83 Yes 8 1.12 Yes 0 0 No -20 0.96 Yes 50 97.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34390060 - NM_001202470 RPS10-NUDT3 1 0.01 0.69 36 6.44 81.36 33 5.59 Yes 58 0.44 No 0 0 No -30 0.4 No 38 65.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 34392633 - NM_001202470 RPS10-NUDT3 1 0.08 6.11 72 -0.77 64.01 33 5.83 Yes 20 0.13 No 0 0 No -16 0.3 No 54 30.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 34392636 - NM_001202470 RPS10-NUDT3 1 0.01 1.01 39 3.13 72.41 30 5.56 Yes 17 0.12 No 0 0 No -29 0.35 No 46 36.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49999892 + NM_001015 RPS11 1 0.02 1.54 33 8.98 85.32 14 5.46 No 21 0.67 No 0 0 No -23 0.67 Yes 37 61.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 50000429 + NM_001015 RPS11 1 0.01 0.79 35 -8.75 0 14 4.12 No 71 -5.04 No 19 0.62 Yes -13 0.8 Yes 51 43.41 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 50002778 + NM_001015 RPS11 1 0.03 2.72 63 -5.98 0 15 4.36 No 25 0.01 No 0 0 No -37 0.79 Yes 33 70.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 133135850 + NM_001016 RPS12 1 0.03 1.04 44 2.27 67.75 25 5.29 No 12 0.92 Yes 25 0.93 Yes -24 0.88 Yes 46 81.97 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 133136040 + NM_001016 RPS12 1 0.01 0.92 28 5.1 71.33 23 5.39 No 62 -4.13 No 0 0 No -22 0.8 Yes 48 74.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 133136154 + NM_001016 RPS12 1 0.01 0.4 22 -1.55 72.17 16 5.26 No 3 1.03 Yes 0 0 No -25 0.75 Yes 45 74.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 133136156 + NM_001016 RPS12 1 0.01 0.43 24 -4.26 74.25 18 5.39 No 5 1.04 Yes 0 0 No -27 0.66 No 43 61.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 17096711 - NM_001017 RPS13 1 0.26 15.32 72 4.67 76.44 22 6 Yes 75 0.42 No 21 0.73 Yes -21 0.75 Yes 49 73.06 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 17096739 - NM_001017 RPS13 1 0.01 0.38 24 -3.72 0 15 3.87 No 47 0.42 No 21 0.73 Yes -30 0.55 No 46 57.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 17099021 - NM_001017 RPS13 1 0.1 4.29 70 0.93 0 30 5.48 No 17 0.97 Yes 25 0.94 Yes -29 0.96 Yes 41 94.25 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 17099024 - NM_001017 RPS13 1 0 0.13 9 -5.18 0 27 5.2 No 14 0.98 Yes 25 0.94 Yes -26 0.97 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 149823915 - NM_005617 RPS14 1 0.08 5.93 71 -1.59 75.48 26 6.32 Yes 13 1.9 Yes 0 0 No -25 0.8 Yes 45 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149823992 - NM_005617 RPS14 1 0 0.14 7 1.63 70.69 10 5.48 No 53 0.78 Yes 0 0 No -26 0.61 No 61 43.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 149824200 - NM_005617 RPS14 1 0 0.26 15 -5.42 0 25 5.39 No 12 0.69 No 0 0 No -24 0.88 Yes 46 72.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 149824205 - NM_005617 RPS14 1 0 0.17 8 5.96 86.59 20 4.9 No 7 0.71 No 19 0.93 Yes -19 0.84 Yes 51 80.57 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 149826439 - NM_005617 RPS14 1 0 0.35 20 5.02 84.05 29 6.5 Yes 45 -3.93 No 0 0 No -28 0.95 Yes 42 95.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 149826525 - NM_005617 RPS14 1 0.02 0.74 24 -8.79 0 24 6.08 Yes 11 1.49 Yes 28 0.46 Yes -23 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 149827298 - NM_005617 RPS14 1 0.03 1.28 46 -11.47 0 30 5.47 No 17 1.49 Yes 0 0 No -29 0.87 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 149829165 - NM_005617 RPS14 1 0 0.14 9 -2.15 0 35 6.24 Yes NA NA NA 0 0 No -32 0.55 No 59 25.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1439604 + NM_001308226 RPS15 1 0.05 1.79 54 7.97 89.32 16 5.39 No 32 0.53 No 26 0.68 Yes -22 0.7 Yes 48 80.55 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 1439942 + NM_001308226 RPS15 1 0.01 0.25 15 -11.06 0 9 3.62 No 32 0.39 No 19 0.67 Yes -44 0.51 No 26 43.18 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 1439959 + NM_001308226 RPS15 1 0.03 1.01 39 -16.64 71.03 20 4.78 No 49 0.39 No 19 0.67 Yes -25 0.49 No 51 66.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 1439966 + NM_001308226 RPS15 1 0.02 0.82 35 0.31 0 14 3.11 No 56 0.38 No 19 0.67 Yes -26 0.51 No 44 61.64 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 1440008 + NM_001308226 RPS15 1 0.01 0.35 23 -5.71 0 20 6.32 Yes 7 -0.06 No 28 0.93 Yes -19 0.6 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 1440021 + NM_001308226 RPS15 1 0.01 0.28 16 -9.9 0 33 7.28 Yes 20 0.41 No 28 0.93 Yes -32 0.86 Yes 38 92.47 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 1440024 + NM_001308226 RPS15 1 0.15 5.83 70 -4.07 0 10 4 No 23 0.41 No 28 0.93 Yes -35 0.86 Yes 35 90.29 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 18794402 - NM_001030009 RPS15A 1 0 0.15 9 2.81 67.47 33 4.24 No 39 0.83 Yes 0 0 No -51 0.82 Yes 19 95.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18794423 - NM_001030009 RPS15A 1 0 0.21 13 -28.24 0 31 5.83 Yes 62 1.23 Yes 0 0 No -30 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 18794424 - NM_001030009 RPS15A 1 0.03 3.65 70 -13.77 0 30 5.74 Yes 61 1.24 Yes 0 0 No -29 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 18794448 - NM_001030009 RPS15A 1 0 0.51 27 1.33 72.22 19 6.16 Yes 37 1.21 Yes 28 0.98 Yes -24 0.45 No 46 45.61 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 18795037 - NM_001030009 RPS15A 1 0 0.15 11 2.8 76.56 31 5.71 Yes 18 1.09 Yes 30 0.95 Yes -30 0.76 Yes 40 92.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 18795175 - NM_001030009 RPS15A 1 0 0.25 16 6.86 80.12 31 5.64 Yes 18 0.49 No 0 0 No -30 0.6 No 40 54.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18796144 - NM_001030009 RPS15A 1 0.04 4.4 70 -25.34 0 36 5.06 No 47 0.74 No 0 0 No -32 0.37 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18796176 - NM_001030009 RPS15A 1 0 0.19 12 -3.98 0 28 4.07 No 15 0.71 No 31 0.5 Yes -27 0.53 No 43 57.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 18797659 - NM_001030009 RPS15A 1 0.22 22.82 72 4.83 86.67 13 4.59 No 0 1.5 Yes 0 0 No -24 0.84 Yes 46 65.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 18797659 - NM_001030009 RPS15A 1 0 0.15 9 4.83 86.67 13 4.59 No 0 1.5 Yes 0 0 No -24 0.84 Yes 46 65.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 18799428 - NM_001030009 RPS15A 1 0.01 0.97 46 2.43 74.21 35 6.61 Yes 62 0.91 Yes 32 0.56 Yes -32 0.68 Yes 38 63.41 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 18799464 - NM_001030009 RPS15A 1 0.01 1.29 53 -8.85 0 17 4.77 No 26 0.94 Yes 32 0.56 Yes -24 0.62 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 18799478 - NM_001030009 RPS15A 1 0.02 1.97 61 0.87 0 25 5.87 Yes 12 0.95 Yes 26 0.9 Yes -30 0.73 Yes 40 70.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 18799482 - NM_001030009 RPS15A 1 0.01 0.82 43 5.46 86.09 21 5.54 No 8 0.95 Yes 26 0.9 Yes -26 0.85 Yes 44 79.6 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 18800440 - NM_001030009 RPS15A 1 0.01 0.24 16 -13.47 0 31 6.4 Yes 18 0.95 Yes 0 0 No -31 0.45 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 18800446 - NM_001030009 RPS15A 1 0 0.17 10 1.49 0 25 5.91 Yes 12 0.96 Yes 28 0.56 Yes -25 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 18800713 - NM_001030009 RPS15A 1 0 0.11 7 6.4 93.1 35 6.22 Yes 37 1.45 Yes 0 0 No -34 0.68 Yes 36 70.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18800866 - NM_001030009 RPS15A 1 0 0.17 11 4.86 81.42 27 5.57 Yes -4 0.5 No 0 0 No -26 0.79 Yes 44 86.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 39924186 - NM_001321111 RPS16 1 0.03 2.75 66 3.61 70.34 16 4.65 No 16 1.03 Yes 0 0 No -44 0.38 No 26 48.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39924199 - NM_001321111 RPS16 1 0.06 6.21 72 -1.98 0 16 4.47 No 3 1.03 Yes 0 0 No -15 0.45 No 39 81.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 39924226 - NM_001321111 RPS16 1 0.01 0.6 32 -2.86 0 26 5.48 No 13 0.7 No 20 0.68 Yes -25 0.82 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 39924247 - NM_001321111 RPS16 1 0 0.14 7 -5.71 0 13 3.95 No 49 -4.42 No 20 0.68 Yes -16 0.38 No 54 28.96 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 39926346 - NM_001321111 RPS16 1 0.3 16.71 72 -0.45 68.61 35 6.78 Yes 22 1.23 Yes 31 0.96 Yes -34 0.97 Yes 36 96.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 42365133 + NM_001321483 RPS19 1 0 0.28 11 -0.18 49.3 29 5.48 No 16 -1.8 No 0 0 No -28 0.69 Yes 42 41.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 42365168 + NM_001321483 RPS19 1 0.04 5.17 71 -0.34 0 24 4.54 No 7 1.09 Yes 31 0.88 Yes -19 0.63 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 42365173 + NM_001321483 RPS19 1 0.03 4.07 68 0.83 0 29 4.83 No 12 1.1 Yes 31 0.88 Yes -24 0.73 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 42365174 + NM_001321483 RPS19 1 0.01 1.15 50 0.98 0 30 4.85 No 13 1.11 Yes 31 0.88 Yes -25 0.73 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 42365548 + NM_001321483 RPS19 1 0.02 1.75 56 10.08 98.59 23 4.81 No 3 0.48 No 22 0.55 Yes -25 0.44 No 43 43.94 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 42365833 + NM_001321483 RPS19 1 0 0.18 11 8.8 86.29 29 4.84 No 24 0.23 No 0 0 No -28 0.63 No 47 63.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 42366356 + NM_001321483 RPS19 1 0.03 3.19 63 6.7 86.63 29 7.68 Yes 16 0.45 No 0 0 No -28 0.77 Yes 42 83.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 42367940 + NM_001321483 RPS19 1 0.03 3.5 53 9.73 93.81 37 6.08 Yes 49 -2.38 No 32 0.29 Yes -32 0.73 Yes 38 78.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 42368243 + NM_001321483 RPS19 1 0 0.26 18 7.42 85.73 12 4.72 No -1 0.54 No 31 0.46 Yes -31 0.76 Yes 39 78.5 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 42373109 + NM_001321483 RPS19 1 0.01 0.67 33 2.2 0 18 4.06 No 10 1.43 Yes 0 0 No -35 0.52 No 48 60.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 42373159 + NM_001321483 RPS19 1 0.01 0.57 29 -1.55 62.27 55 7.68 Yes 60 1.39 Yes 0 0 No -38 0.34 No 42 38.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 39925216 - NM_194326 RPS19BP1 1 0.04 0.14 9 8.61 92.04 40 6.32 Yes NA NA NA 0 0 No -25 0.63 No 45 63.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 39926174 - NM_194326 RPS19BP1 1 0.09 0.25 15 5.53 74.96 38 11.1 Yes 25 0.61 No 0 0 No -37 0.7 Yes 33 76.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39926560 - NM_194326 RPS19BP1 1 0.81 2.26 60 5.57 89.28 23 5.83 Yes 10 1.06 Yes 22 0.87 Yes -22 0.86 Yes 48 92.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 39928528 - NM_194326 RPS19BP1 1 0.07 0.14 8 -10.26 0 34 8.31 Yes 21 2.21 Yes 0 0 No -33 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2012608 - NM_002952 RPS2 1 0.02 2.14 60 6.08 81.66 48 7.2 Yes 55 2.02 Yes 0 0 No -21 0.32 No 49 46.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 2012651 - NM_002952 RPS2 1 0.02 2.71 69 -2.72 0 13 4 No 12 2.03 Yes 0 0 No -12 0.71 Yes 46 80.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2013841 - NM_002952 RPS2 1 0.06 0.31 13 2.87 0 20 3.85 No 21 1.18 Yes 19 0.81 Yes -19 0.74 Yes 37 80.86 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 56986710 - NM_001023 RPS20 1 0 0.19 14 -1.62 0 17 3.39 No 26 0.29 No 29 0.93 Yes -38 0.84 Yes 32 90.69 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 60962378 + NM_001024 RPS21 1 0.03 0.71 33 -20.99 0 28 7.81 Yes -1 0.84 Yes 22 0.97 Yes -27 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 60962675 + NM_001024 RPS21 1 0 0.21 14 -2.93 0 14 4.24 No 17 1.52 Yes 0 0 No -29 0.94 Yes 41 94.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60962907 + NM_001024 RPS21 1 0 0.15 8 -2.58 0 12 4.24 No 16 1.83 Yes 0 0 No -28 0.9 Yes 42 93.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60963374 + NM_001024 RPS21 1 0.01 0.21 13 -6.83 0 14 3.73 No 63 2 Yes 0 0 No -35 0.93 Yes 35 94.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60963511 + NM_001024 RPS21 1 0 0.22 16 -8.38 0 26 6.7 Yes 13 1.36 Yes 27 0.94 Yes -26 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 60963505 + NM_001024 RPS21 1 0.01 0.38 21 2.4 0 20 6.24 Yes 7 1.35 Yes 27 0.94 Yes -20 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 60963506 + NM_001024 RPS21 1 0 0.19 12 1.98 0 21 6.32 Yes 8 1.37 Yes 27 0.94 Yes -21 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 81572062 - NM_001025 RPS23 1 0.01 0.64 27 -7.34 46.17 21 4.69 No 62 0.64 No 0 0 No -45 0.43 No 25 61.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 81572100 - NM_001025 RPS23 1 0.01 0.61 28 1.72 66.24 37 5.85 Yes 55 1.41 Yes 27 0.38 Yes -36 0.82 Yes 34 90.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 81572302 - NM_001025 RPS23 1 0.01 0.81 35 4.31 75.88 23 4.22 No 50 0.61 No 0 0 No -22 0.43 No 48 45.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 81572336 - NM_001025 RPS23 1 0 0.29 18 1.3 84.05 29 5.74 Yes 16 0.62 No 0 0 No -28 0.94 Yes 42 96.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 81572343 - NM_001025 RPS23 1 0 0.11 8 -2.49 0 22 5.1 No 9 0.67 No 26 0.97 Yes -21 0.93 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 81573644 - NM_001025 RPS23 1 0 0.17 10 5.56 78.94 31 5.42 No 33 0.62 No 0 0 No -30 0.6 No 25 26.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 81573667 - NM_001025 RPS23 1 0.01 0.22 14 -4.67 0 23 5.98 Yes 10 0.63 No 0 0 No -22 0.75 Yes 48 57.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 81573671 - NM_001025 RPS23 1 0.01 0.35 22 -3.32 0 19 5.63 Yes 6 0.63 No 0 0 No -30 0.53 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 81573694 - NM_001025 RPS23 1 0 0.14 10 0.26 77.15 26 5.39 No 51 -3.73 No 29 0.79 Yes -26 0.73 Yes 44 55.74 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 79794009 + NM_001142285 RPS24 1 0 0.38 17 -2.12 0 15 5.39 No 2 -0.29 No 0 0 No -14 0.47 No 56 44.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 79795135 + NM_001142285 RPS24 1 0 0.11 7 2.56 67.87 15 5.89 Yes 36 1.07 Yes 0 0 No -48 0.71 Yes 22 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 79796922 + NM_001142285 RPS24 1 0 0.25 17 2.11 67.94 21 5.6 Yes 43 0.16 No 27 0.92 Yes -20 0.63 No 50 70.39 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 79796969 + NM_001142285 RPS24 1 0 0.1 7 -4.52 61.68 25 5.13 No 33 0.3 No 0 0 No -24 0.69 Yes 18 74.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 118888144 - NM_001028 RPS25 1 0.19 13.76 72 3.39 75.91 34 5.81 Yes 63 0.94 Yes 22 0.71 Yes -22 0.43 No 48 44.29 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 118888253 - NM_001028 RPS25 1 0.01 0.68 32 -10.93 0 9 3.87 No 20 1.91 Yes 0 0 No -32 0.85 Yes 38 93.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 118888255 - NM_001028 RPS25 1 0 0.29 18 -23.21 0 31 6.86 Yes 18 1.93 Yes 0 0 No -30 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 118888259 - NM_001028 RPS25 1 0.01 0.42 22 -1.31 74.38 27 6.56 Yes 14 1.94 Yes 29 0.95 Yes -26 0.84 Yes 44 94.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 118888510 - NM_001028 RPS25 1 0 0.13 7 10.43 87.83 25 6.47 Yes 12 1.14 Yes 24 0.85 Yes -24 0.67 Yes 46 86.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 118888761 - NM_001028 RPS25 1 0 0.1 7 -4.35 0 38 6.63 Yes 46 -2.72 No 21 0.72 Yes -24 0.87 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 118888775 - NM_001028 RPS25 1 0.01 0.32 21 0.13 0 24 5.48 No 32 -2.82 No 21 0.72 Yes -23 0.52 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 118888796 - NM_001028 RPS25 1 0 0.18 13 -0.33 70.7 24 5.48 No 68 -5.35 No 21 0.72 Yes -23 0.74 Yes 47 59.85 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 56436189 + NM_001029 RPS26 1 0.01 0.17 9 10.36 87.14 23 5.39 No 20 -0.11 No 23 0.97 Yes -22 0.58 No 45 63.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 56436708 + NM_001029 RPS26 1 0.01 0.17 8 4.08 69.49 48 7.65 Yes 17 0.35 No 0 0 No -29 0.46 No 37 72.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 56437163 + NM_001029 RPS26 1 0.01 0.28 15 2.09 69.88 20 5.08 No 26 1.34 Yes 0 0 No -19 0.38 No 32 36.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 153963389 + NM_001030 RPS27 1 0.1 15.75 72 8.6 81.86 23 5.95 Yes 10 0.89 Yes 22 0.84 Yes -22 0.93 Yes 48 90.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 153963599 + NM_001030 RPS27 1 0 0.86 26 -1.89 0 12 4.24 No 23 1.36 Yes 0 0 No -35 0.79 Yes 35 83.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 153964010 + NM_001030 RPS27 1 0 0.18 10 -7.47 55.36 22 4.69 No 24 -2.48 No 28 0.33 Yes -20 0.39 No 53 21.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 153964069 + NM_001030 RPS27 1 0 0.72 34 -0.86 65.17 15 5.66 Yes 18 -2.5 No 0 0 No -20 0.57 No 50 70.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 153964553 + NM_001030 RPS27 1 0 0.32 16 5.19 85.48 16 4.69 No 17 1.3 Yes 0 0 No -36 0.68 Yes 34 89.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55462545 + NM_001177413 RPS27A 1 0.06 4.9 71 5.69 79.14 16 5.71 Yes 3 0.25 No 23 0.95 Yes -28 0.78 Yes 42 84.46 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 55462548 + NM_001177413 RPS27A 1 0.06 5.67 69 3.96 83.03 19 5.95 Yes 6 0.26 No 23 0.95 Yes -31 0.77 Yes 39 65.24 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 63447481 - NM_015920 RPS27L 1 0.01 0.26 12 9.1 91.35 30 3.34 No 52 0.13 No 0 0 No -33 0.33 No 45 42.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 63447874 - NM_015920 RPS27L 1 0.03 0.71 37 6.56 83.79 22 4.9 No 68 1.02 Yes 0 0 No -21 0.96 Yes 49 95.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63448713 - NM_015920 RPS27L 1 0.03 0.43 24 -2.31 0 11 4.12 No 14 0.6 No 0 0 No -35 0.62 No 35 58.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 63448720 - NM_015920 RPS27L 1 0.01 0.22 14 -13.18 0 29 5.26 No 7 0.63 No 0 0 No -28 0.61 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 63449173 - NM_015920 RPS27L 1 0.05 0.9 31 2.94 79.07 68 8.29 Yes 0 -1.81 No 0 0 No -42 0.37 No 28 65.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8386525 + NM_001031 RPS28 1 0 0.11 7 1.09 66.64 23 4.63 No 72 -5.94 No 21 0.93 Yes -22 0.42 No 48 17.33 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 8386548 + NM_001031 RPS28 1 0 0.11 7 -2.3 0 12 4.24 No 18 1.39 Yes 0 0 No -30 0.85 Yes 40 75.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50050393 - NM_001032 RPS29 1 0 0.1 7 -9.55 0 26 5.5 No 13 0.64 No 0 0 No -26 0.31 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50052300 - NM_001032 RPS29 1 0.02 1.21 41 10.9 88.27 30 5.97 Yes 54 1.2 Yes 29 0.8 Yes -22 0.36 No 48 54.56 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 75113164 + NM_001256802 RPS3 1 0 0.17 11 9 83.34 32 7.64 Yes 19 0.22 No 0 0 No -31 0.81 Yes 39 65.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 152021578 + NM_001006 RPS3A 1 0.01 0.39 23 -0.39 69.41 38 5.93 Yes 17 -3.36 No 20 0.75 Yes -20 0.75 Yes 50 84.81 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 152021618 + NM_001006 RPS3A 1 0.01 0.31 18 -2.48 56.55 27 4.68 No 57 -5.89 No 21 0.87 Yes -19 0.43 No 57 32.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 152024115 + NM_001006 RPS3A 1 0 0.14 9 -2.15 58.77 51 8.2 Yes 38 0.46 No 0 0 No -50 0.67 Yes 20 56.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 152024139 + NM_001006 RPS3A 1 0.01 0.49 26 -1.59 82.3 9 4.9 No 62 0.46 No 0 0 No -26 0.47 No 52 27.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 71493259 - NM_001007 RPS4X 1 0.01 0.69 30 -3.95 0 18 4.2 No 23 1.25 Yes 25 0.87 Yes -35 0.91 Yes 35 93.36 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 71493718 - NM_001007 RPS4X 1 0.01 0.76 35 6.16 76.4 46 6.3 Yes 33 0.76 No 0 0 No -41 0.64 No 29 81.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 71493817 - NM_001007 RPS4X 1 0.03 2.53 62 -3.72 0 9 3.87 No 12 2.26 Yes 0 0 No -24 0.85 Yes 46 87.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 71494286 - NM_001007 RPS4X 1 0.1 7.65 70 5.25 86.14 29 5.85 Yes 16 1.48 Yes 28 0.92 Yes -28 0.59 No 42 70.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chrX 71495025 - NM_001007 RPS4X 1 0.05 3.74 70 -1.78 68.02 26 5.2 No 13 -1.98 No 22 0.94 Yes -21 0.53 No 49 51.99 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 71495484 - NM_001007 RPS4X 1 0 0.4 22 3.67 82.66 17 3.79 No 28 1.09 Yes 0 0 No -16 0.45 No 54 66.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 71495504 - NM_001007 RPS4X 1 0 0.18 8 -3.4 0 9 3.87 No 8 1.11 Yes 0 0 No -38 0.58 No 32 74.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 71495545 - NM_001007 RPS4X 1 0 0.19 14 0.08 63.96 40 6.17 Yes 27 0.73 No 0 0 No -39 0.43 No 12 45.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 71495581 - NM_001007 RPS4X 1 0 0.14 8 -5.19 0 17 5.18 No 4 0.59 No 29 0.74 Yes -23 0.51 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 71495599 - NM_001007 RPS4X 1 0 0.18 10 2.53 69.9 12 4.67 No 67 -4.52 No 29 0.74 Yes -23 0.69 Yes 55 53.74 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 58899400 + NM_001009 RPS5 1 0.01 0.21 12 5.63 76.45 33 7.1 Yes 20 1.34 Yes 0 0 No -32 0.95 Yes 38 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58899784 + NM_001009 RPS5 1 0 0.21 12 6.65 73.4 43 7.72 Yes 3 1.07 Yes 29 0.52 Yes -29 0.54 No 40 54.11 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 58904363 + NM_001009 RPS5 1 0 0.11 8 -23.11 0 18 4.12 No 47 2.38 Yes 0 0 No -59 0.8 Yes 11 80.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58904366 + NM_001009 RPS5 1 0.01 0.26 14 -18.3 0 10 3.87 No 50 2.38 Yes 0 0 No -48 0.37 No 11 19.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 58904737 + NM_001009 RPS5 1 0.03 1.39 51 3.81 0 15 4.58 No 19 1.02 Yes 0 0 No -31 0.79 Yes 39 88.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58905730 + NM_001009 RPS5 1 0 0.21 13 4.06 74.59 25 8.22 Yes 12 1.59 Yes 0 0 No -24 0.73 Yes 46 81.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58905840 + NM_001009 RPS5 1 0.01 0.32 13 5.92 80.2 17 4.69 No 73 -3.54 No 19 0.89 Yes -23 0.42 No 47 54.98 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 58906075 + NM_001009 RPS5 1 0.19 10.33 72 -1.99 71.05 19 6 Yes 70 -2.26 No 0 0 No -49 0.32 No 21 67.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 58906078 + NM_001009 RPS5 1 0.02 1.08 42 -4.42 59.48 22 6.24 Yes 73 -2.27 No 0 0 No -52 0.35 No 18 64.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19376384 - NM_001010 RPS6 1 0 0.33 18 -4.97 81.7 30 6.62 Yes 17 1.61 Yes 0 0 No -29 0.77 Yes 41 77.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 19376419 - NM_001010 RPS6 1 0 0.24 14 -2.26 0 36 6.93 Yes -2 0.51 No 26 0.9 Yes -35 0.51 No 60 71.73 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 19376423 - NM_001010 RPS6 1 0 0.22 13 3.59 81.16 32 6.63 Yes 54 -3.52 No 26 0.9 Yes -31 0.78 Yes 51 47.86 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr9 19376588 - NM_001010 RPS6 1 0.17 27.51 72 7.96 79.06 30 5.36 No 17 0.65 No 0 0 No -29 0.96 Yes 41 96.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 19378505 - NM_001010 RPS6 1 0 0.57 30 -13.44 0 11 4.12 No 22 0.24 No 0 0 No -34 0.35 No 31 48.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19378510 - NM_001010 RPS6 1 0.08 11.03 72 -18.95 77.91 30 6.09 Yes 17 0.26 No 0 0 No -29 0.41 No 41 50.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19378801 - NM_001010 RPS6 1 0.03 2.93 64 6.33 88.11 24 4.62 No 38 0.78 Yes 0 0 No -23 0.6 No 47 81.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 19378860 - NM_001010 RPS6 1 0 0.15 8 0.37 75.4 27 4.99 No 74 0.53 No 0 0 No -24 0.52 No 61 20.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19378863 - NM_001010 RPS6 1 0 0.39 20 0.49 75.78 24 4.69 No 71 0.54 No 0 0 No -21 0.56 No 51 25.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 19379598 - NM_001010 RPS6 1 0.09 6.49 70 3.1 83.62 17 4.38 No 4 0.98 Yes 0 0 No -27 0.71 Yes 49 64.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 26873257 + NM_001006665 RPS6KA1 1 0.14 0.25 15 7.07 78.99 27 5.29 No 34 1 Yes 0 0 No -26 0.91 Yes 44 92.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26873340 + NM_001006665 RPS6KA1 1 0.13 0.25 13 0.71 71.51 15 6.86 Yes 73 -1.06 No 22 0.87 Yes -28 0.72 Yes 30 43.19 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 26876390 + NM_001006665 RPS6KA1 1 0.05 0.15 10 2.81 83.57 33 8 Yes 20 1.09 Yes 0 0 No -32 0.87 Yes 38 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26877179 + NM_001006665 RPS6KA1 1 0.03 0.13 7 2.09 66.76 28 6.15 Yes 75 -5.38 No 0 0 No -30 0.42 No 40 64.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 26878997 + NM_001006665 RPS6KA1 1 0.11 0.44 25 11.25 95.65 26 5.36 No 7 0.98 Yes 0 0 No -25 0.84 Yes 45 87.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26879308 + NM_001006665 RPS6KA1 1 0.21 0.78 31 6.8 72.68 26 5.95 Yes 67 -4.21 No 26 0.88 Yes -26 0.76 Yes 44 83.23 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 26881642 + NM_001006665 RPS6KA1 1 0.03 0.11 7 -14.35 0 24 5.2 No 11 0.58 No 21 0.97 Yes -23 0.88 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 26881674 + NM_001006665 RPS6KA1 1 0.39 1.24 45 10.58 89.27 22 6 Yes 9 1.97 Yes 21 0.97 Yes -21 0.79 Yes 49 93.34 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 26882566 + NM_001006665 RPS6KA1 1 0.14 0.44 21 9.33 88.39 23 5.78 Yes 10 1.09 Yes 22 0.82 Yes -22 0.47 No 48 78.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 26883491 + NM_001006665 RPS6KA1 1 0.04 0.14 9 -3.51 60.57 30 5.57 Yes 17 1.17 Yes 29 0.45 Yes -29 0.91 Yes 41 90.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 26884364 + NM_001006665 RPS6KA1 1 0.06 0.21 10 3.46 84.95 28 5.19 No 15 -0.77 No 0 0 No -27 0.71 Yes 43 40.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 26886052 + NM_001006665 RPS6KA1 1 0.06 0.17 9 7.28 85.02 30 6.4 Yes 17 1.46 Yes 0 0 No -29 0.87 Yes 41 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26888784 + NM_001006665 RPS6KA1 1 0.05 0.18 12 8.82 83.56 33 5.68 Yes 6 0.12 No 0 0 No -32 0.73 Yes 38 58.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 26898668 + NM_001006665 RPS6KA1 1 0.08 0.28 18 -13.93 0 26 5.66 Yes 75 -0.35 No 0 0 No -29 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 26899481 + NM_001006665 RPS6KA1 1 0.04 0.18 10 3.77 78.9 36 6.47 Yes 23 0.63 No 0 0 No -35 0.78 Yes 35 88.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 20183080 - NM_004586 RPS6KA3 1 0.18 0.19 12 4.16 72.66 45 6.83 Yes 8 0.49 No 20 0.42 Yes -20 0.25 No 37 50.68 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 20187108 - NM_004586 RPS6KA3 1 0.31 0.22 13 2.74 71.84 23 5.9 Yes 10 1.11 Yes 0 0 No -22 0.83 Yes 48 79.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 20190987 - NM_004586 RPS6KA3 1 4.75 4.5 71 4.43 86.27 26 5.33 No 61 1.1 Yes 22 0.87 Yes -25 0.56 No 45 82.36 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chrX 20194611 - NM_004586 RPS6KA3 1 0.64 0.43 24 -0.13 0 11 3.87 No 10 0.65 No 0 0 No -29 0.59 No 44 61.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 20194635 - NM_004586 RPS6KA3 1 1.32 0.85 36 0.41 61.81 39 6.69 Yes 26 0.42 No 23 0.75 Yes -38 0.72 Yes 32 77.35 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 20251247 - NM_004586 RPS6KA3 1 0.44 0.31 19 2.75 0 46 7.75 Yes 33 1.48 Yes 0 0 No -45 0.46 No 25 79.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 20258724 - NM_004586 RPS6KA3 1 1.48 0.53 30 9.61 81.37 13 6.17 Yes 0 1.33 Yes 25 0.73 Yes -25 0.81 Yes 45 88.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 20258788 - NM_004586 RPS6KA3 1 0.4 0.15 10 8.34 91.2 26 5.24 No 31 1.04 Yes 25 0.92 Yes -25 0.77 Yes 45 89.7 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 20259805 - NM_004586 RPS6KA3 1 3.55 1.32 48 8.09 85.06 31 7.19 Yes 18 1.58 Yes 0 0 No -30 0.64 No 40 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 64128292 + NM_003942 RPS6KA4 1 0.54 0.31 18 9.92 95.76 21 5.1 No 48 0.15 No 0 0 No -20 0.75 Yes 50 70.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 64129378 + NM_003942 RPS6KA4 1 5.07 2.31 64 1.71 71.67 46 7.14 Yes 64 2.17 Yes 18 0.33 Yes -45 0.8 Yes 25 75.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64135957 + NM_003942 RPS6KA4 1 5.38 2.38 61 5.65 83.14 21 5.2 No 45 2.33 Yes 20 0.28 Yes -57 0.76 Yes 13 49.44 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 64135960 + NM_003942 RPS6KA4 1 20.14 8.28 72 7.05 84.58 24 5.48 No 48 2.33 Yes 20 0.28 Yes -60 0.43 No 50 59.84 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 64137717 + NM_003942 RPS6KA4 1 8.01 1.72 50 5.69 77.65 16 5.48 No 30 1.86 Yes 20 0.08 Yes -42 0.85 Yes 28 45.59 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 91341684 - NM_001322237 RPS6KA5 1 4.62 0.21 14 1.02 0 26 5.48 No 54 0.46 No 0 0 No -50 0.9 Yes 20 78.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 91377873 - NM_001322237 RPS6KA5 1 0.97 0.13 7 3.48 89.28 24 3.82 No 65 0.64 No 0 0 No -23 0.83 Yes 47 92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 91385811 - NM_001322237 RPS6KA5 1 2.23 0.18 11 -0.28 0 57 7.52 Yes 44 0.6 No 0 0 No -56 0.54 No 14 70.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 91407924 - NM_001322237 RPS6KA5 1 2.7 0.18 10 8.6 79.98 36 6 Yes 23 1.24 Yes 0 0 No -22 0.47 No 35 80.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 58000564 + NM_001272044 RPS6KB1 1 0.16 0.15 11 5.51 87.85 27 5.39 No 47 0.27 No 0 0 No -26 0.61 No 44 75.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 58003776 + NM_001272044 RPS6KB1 1 0.15 0.17 9 9.88 87.36 28 4.67 No 6 0.87 Yes 18 0.44 Yes -18 0.25 No 37 25.68 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 58007718 + NM_001272044 RPS6KB1 1 5.73 6.01 72 9.28 84.4 22 5.7 Yes 9 0.31 No 21 0.8 Yes -21 0.68 Yes 49 71.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 58008160 + NM_001272044 RPS6KB1 1 1.42 1.49 51 8.36 93.85 71 6.46 Yes 41 0.2 No 31 0.62 Yes -28 0.41 No 50 58.72 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 58014938 + NM_001272044 RPS6KB1 1 3.96 3.33 68 8.95 88.79 26 8.79 Yes 13 1.36 Yes 0 0 No -26 0.6 No 45 70.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 58022745 + NM_001272044 RPS6KB1 1 0.25 0.26 15 2.09 71.4 20 5.89 Yes 34 0.94 Yes 0 0 No -22 0.76 Yes 48 80.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58023893 + NM_001272044 RPS6KB1 1 0.67 0.64 33 -2.04 53.43 24 4.78 No 56 0.42 No 0 0 No -17 0.46 No 54 54.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 58023916 + NM_001272044 RPS6KB1 1 0.1 0.1 7 0.11 0 28 5.29 No 15 0.59 No 0 0 No -25 0.58 No 45 65.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67199823 + NM_003952 RPS6KB2 1 1.8 2.67 64 6.25 83.95 32 6 Yes 53 -1.29 No 29 0.43 Yes -29 0.73 Yes 41 67.91 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 67199826 + NM_003952 RPS6KB2 1 2.01 2.97 64 6.33 77.62 35 6.24 Yes 56 -1.28 No 29 0.43 Yes -32 0.66 No 38 49.44 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 67199998 + NM_003952 RPS6KB2 1 0.16 0.24 15 3.19 76.07 22 4.56 No 6 0.41 No 0 0 No -21 0.71 Yes 49 59.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67200001 + NM_003952 RPS6KB2 1 0.26 0.39 23 2.28 74.53 25 4.83 No 9 0.38 No 0 0 No -24 0.66 Yes 46 56.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67200826 + NM_003952 RPS6KB2 1 0.32 0.5 24 7.8 81.1 19 5 No 22 2.07 Yes 0 0 No -34 0.82 Yes 36 91.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67201466 + NM_003952 RPS6KB2 1 0.07 0.11 7 -12.3 0 24 6.16 Yes 11 2.09 Yes 0 0 No -23 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 67201670 + NM_003952 RPS6KB2 1 0.1 0.17 11 -8.49 71.9 39 6.06 Yes 19 -1.11 No 0 0 No -31 0.74 Yes 39 70.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 67201850 + NM_003952 RPS6KB2 1 1.24 2.42 66 -1.39 70.09 32 7.94 Yes 19 2.34 Yes 0 0 No -31 0.86 Yes 39 86.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67202087 + NM_003952 RPS6KB2 1 0.13 0.17 10 6.37 79.97 30 6.63 Yes 54 0.67 No 0 0 No -29 0.9 Yes 41 81.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 213251321 + NM_001136138 RPS6KC1 1 0.42 0.21 8 8.8 82.66 29 6.2 Yes 16 0.09 No 0 0 No -28 0.6 No 42 54.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 213254582 + NM_001136138 RPS6KC1 1 0.25 0.14 9 8.29 90.04 13 4.7 No 0 0.12 No 0 0 No -21 0.84 Yes 49 82.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 213261303 + NM_001136138 RPS6KC1 1 2.31 1.19 49 11.2 92.63 20 4.77 No 7 1.78 Yes 0 0 No -22 0.82 Yes 48 65.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 213281510 + NM_001136138 RPS6KC1 1 1.37 0.68 34 5.89 83.64 47 6.88 Yes 63 0.02 No 0 0 No -42 0.64 No 28 76.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 213296424 + NM_001136138 RPS6KC1 1 1.06 0.31 18 7.2 83.99 33 8.28 Yes 11 0.04 No 0 0 No -28 0.49 No 42 58.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 213299108 + NM_001136138 RPS6KC1 1 3.69 1.18 41 12.65 88.76 23 5.61 Yes 10 0.66 No 0 0 No -27 0.71 Yes 43 81.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 213315957 + NM_001136138 RPS6KC1 1 1.25 0.44 24 6.95 88.1 24 6.53 Yes 11 1.03 Yes 0 0 No -23 0.85 Yes 47 90.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 213330581 + NM_001136138 RPS6KC1 1 0.29 0.1 7 3.01 0 25 7.9 Yes 72 0.63 No 0 0 No -32 0.47 No 46 56.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 213341186 + NM_001136138 RPS6KC1 1 0.46 0.15 11 5.59 87.1 28 5.1 No 15 0.02 No 24 0.49 Yes -27 0.86 Yes 43 84.08 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 213345999 + NM_001136138 RPS6KC1 1 0.65 0.19 11 2.62 66.04 31 5.83 Yes 0 0.46 No 0 0 No -30 0.86 Yes 40 73.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 213346760 + NM_001136138 RPS6KC1 1 0.42 0.13 7 4.87 82.88 42 5.55 No 20 1.14 Yes 0 0 No -32 0.64 No 38 72.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 213382635 + NM_001136138 RPS6KC1 1 0.7 0.1 7 3.62 78.75 55 8.73 Yes 60 1.75 Yes 0 0 No -25 0.61 No 45 50.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 213371921 + NM_001136138 RPS6KC1 1 1.98 0.31 14 8.81 92.44 21 3.73 No 37 -2.16 No 0 0 No -27 0.46 No 43 47.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 213377991 + NM_001136138 RPS6KC1 1 0.72 0.13 8 4.09 0 42 7.91 Yes 29 1.34 Yes 0 0 No -41 0.53 No 29 73.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 213378581 + NM_001136138 RPS6KC1 1 1.87 0.28 18 1.84 68.18 45 7.79 Yes 10 0.67 No 0 0 No -22 0.6 No 40 40.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 213382635 + NM_001136138 RPS6KC1 1 1.52 0.22 13 3.62 78.75 55 8.73 Yes 60 1.75 Yes 0 0 No -25 0.61 No 45 50.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 213427329 + NM_001136138 RPS6KC1 1 0.56 0.13 8 8.7 76.89 25 5.94 Yes 74 0.44 No 0 0 No -25 0.66 No 45 74.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 3623146 + NM_001011 RPS7 1 0.02 0.63 29 -0.43 0 19 4.39 No NA NA NA 22 0.9 Yes -18 0.57 No 52 23.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 3623190 + NM_001011 RPS7 1 0.27 10.78 71 3.09 0 12 4.24 No 13 2.32 Yes 22 0.9 Yes -25 0.76 Yes 45 73.91 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 3624148 + NM_001011 RPS7 1 0.01 0.24 14 5.7 80.36 37 5.6 Yes 24 0.82 Yes 0 0 No -36 0.51 No 31 57.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 3624148 + NM_001011 RPS7 1 0.3 10.6 72 5.7 80.36 37 5.6 Yes 24 0.82 Yes 0 0 No -36 0.51 No 31 57.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 3625301 + NM_001011 RPS7 1 0.01 0.61 31 -6.75 79.54 46 6.66 Yes 5 0.4 No 0 0 No -23 0.68 Yes 47 69.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 3625317 + NM_001011 RPS7 1 0 0.15 9 -7.17 65.13 23 4.69 No 21 0.41 No 0 0 No -22 0.67 Yes 31 54.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 3628364 + NM_001011 RPS7 1 0.01 0.64 24 2.25 72.52 17 4.65 No 4 0.81 Yes 0 0 No -21 0.74 Yes 49 76.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45243199 + NM_001012 RPS8 1 0 0.28 14 7.97 86.21 25 5.31 No 12 0.79 Yes 25 0.87 Yes -24 0.82 Yes 46 86.86 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 54710420 + NM_001321702 RPS9 1 0 0.13 8 9.26 85.87 32 4.53 No 15 1.51 Yes 27 0.92 Yes -27 0.65 No 43 87.17 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 54710420 + NM_001321702 RPS9 1 0.95 53.69 72 9.26 85.87 32 4.53 No 15 1.51 Yes 27 0.92 Yes -27 0.65 No 43 87.17 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 54710479 + NM_001321702 RPS9 1 0.01 0.56 31 3.68 75.46 15 5.2 No 74 1.46 Yes 0 0 No -20 0.49 No 50 39.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 54711238 + NM_001321702 RPS9 1 0.06 3.08 69 9.35 88.05 21 5.2 No 51 -1.18 No 19 0.84 Yes -20 0.77 Yes 50 65.42 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 54711278 + NM_001321702 RPS9 1 0 0.17 11 1.9 71.35 16 4.69 No 20 1.5 Yes 0 0 No -32 0.9 Yes 38 81.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 39449087 + NM_001304288 RPSA 1 0.04 1.78 42 -5.26 48.7 36 6.23 Yes 57 0.74 No 25 0.72 Yes -19 0.59 No 51 29.61 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 39449131 + NM_001304288 RPSA 1 0.09 4.79 70 5.46 73.52 28 5.35 No -4 0.37 No 0 0 No -27 0.76 Yes 43 79.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 39453358 + NM_001304288 RPSA 1 0.01 0.69 33 -4.93 0 13 4.36 No 75 -5.2 No 30 0.64 Yes -22 0.17 No 51 28.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 39453498 + NM_001304288 RPSA 1 0.01 0.58 28 -3.83 0 16 3.17 No 18 0.81 Yes 0 0 No -15 0.49 No 45 29.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 39453767 + NM_001304288 RPSA 1 0.22 15.99 72 -1.15 71.38 32 6.54 Yes 19 1.25 Yes 0 0 No -31 0.94 Yes 39 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78593426 + NM_001163034 RPTOR 1 0.63 0.47 22 5.61 83.3 22 5.92 Yes 9 0.96 Yes 0 0 No -21 0.78 Yes 49 82.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78644920 + NM_001163034 RPTOR 1 0.25 0.19 14 10.83 89.4 31 8.25 Yes 18 1.35 Yes 0 0 No -30 0.71 Yes 40 80.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78656785 + NM_001163034 RPTOR 1 0.21 0.14 10 6.28 86.87 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.55 No 51 85.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 78728140 + NM_001163034 RPTOR 1 0.22 0.1 7 6.07 79.93 40 6.78 Yes 36 0.46 No 0 0 No -39 0.65 No 31 60.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 78820277 + NM_001163034 RPTOR 1 0.26 0.13 9 -0.58 0 34 6.08 Yes 21 1.52 Yes 0 0 No -33 0.93 Yes 37 93.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78865882 + NM_001163034 RPTOR 1 0.29 0.13 8 2.52 74.24 54 8.47 Yes 41 2.92 Yes 0 0 No -45 0.64 No 25 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 78874433 + NM_001163034 RPTOR 1 0.45 0.25 13 11.38 95.57 36 5.44 No 67 0.44 No 0 0 No -21 0.57 No 49 86.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 78891452 + NM_001163034 RPTOR 1 0.43 0.18 11 8.63 89.2 26 5.52 No 31 1.26 Yes 0 0 No -25 0.56 No 38 79.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 837242 - NM_001324412 RPUSD1 1 0.83 0.56 26 5.77 76.77 41 6.67 Yes 28 0.34 No 0 0 No -40 0.36 No 43 64.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9880818 - NM_001142547 RPUSD3 1 0.47 0.43 22 1.36 72.17 27 4.89 No 14 -1.6 No 0 0 No -20 0.58 No 50 60.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9880836 - NM_001142547 RPUSD3 1 0.24 0.22 12 3.61 0 9 4.33 No -4 -0.5 No 0 0 No -53 0.61 No 20 53.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9880846 - NM_001142547 RPUSD3 1 0.33 0.31 17 1.91 0 13 4.36 No 59 -0.34 No 0 0 No -43 0.69 Yes 30 67.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 9882020 - NM_001142547 RPUSD3 1 0.22 0.19 12 -6.26 0 14 4.47 No 68 1.15 Yes 20 0.54 Yes -20 0.4 No 50 30.93 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 9883475 - NM_001142547 RPUSD3 1 0.96 0.94 38 1.58 76.57 24 5.38 No 72 -6.09 No 0 0 No -23 0.88 Yes 47 88.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 126073550 - NM_032795 RPUSD4 1 1.15 1 40 1.52 73.93 29 5.83 Yes 16 0.56 No 0 0 No -28 0.93 Yes 42 93.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 126076449 - NM_032795 RPUSD4 1 0.51 0.33 19 10.62 86.91 23 7.14 Yes 10 1.29 Yes 0 0 No -25 0.71 Yes 45 88.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 55753739 + NM_006064 RRAGB 1 4.66 0.81 33 8.85 81.76 29 5.66 Yes 55 2.72 Yes 28 0.88 Yes -28 0.91 Yes 42 79.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 55774493 + NM_006064 RRAGB 1 1.02 0.19 11 -0.87 0 32 7.68 Yes 19 1.52 Yes 0 0 No -31 0.82 Yes 39 91.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 55778659 + NM_006064 RRAGB 1 10.81 0.82 38 2.88 76.51 25 6.08 Yes 58 0.81 Yes 0 0 No -24 0.8 Yes 46 64.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 55781268 + NM_006064 RRAGB 1 4.85 0.76 32 5.01 88.34 24 5 No 11 0.71 No 0 0 No -23 0.89 Yes 47 92.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 55781500 + NM_006064 RRAGB 1 10.67 1.99 64 -1.87 82.14 26 5.1 No 13 0.95 Yes 0 0 No -25 0.83 Yes 45 89.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 55784897 + NM_006064 RRAGB 1 0.72 0.15 9 8.07 76.44 38 6.17 Yes 25 1.67 Yes 0 0 No -31 0.95 Yes 39 94.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 39311672 - NM_022157 RRAGC 1 0.09 0.1 7 6.33 85.77 24 5.15 No 11 0.61 No 0 0 No -27 0.39 No 47 49.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 39317389 - NM_022157 RRAGC 1 0.16 0.15 10 4.41 80.52 29 5.57 Yes 55 1.08 Yes 0 0 No -28 0.9 Yes 42 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 39317389 - NM_022157 RRAGC 1 0.15 0.15 8 4.41 80.52 29 5.57 Yes 55 1.08 Yes 0 0 No -28 0.9 Yes 42 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 39318179 - NM_022157 RRAGC 1 0.1 0.11 7 1.49 60.78 24 5.48 No 40 -2.65 No 24 0.89 Yes -24 0.37 No 44 55.09 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 90097116 - NM_021244 RRAGD 1 0.62 0.69 32 9.42 86.46 24 5.29 No 35 -1.55 No 0 0 No -24 0.74 Yes 47 68.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 14300988 - NM_001177315 RRAS2 1 0.09 0.36 18 2.56 73.27 25 4.88 No 35 1.3 Yes 24 0.5 Yes -21 0.59 No 49 65.68 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 14301567 - NM_001177315 RRAS2 1 0.24 0.82 39 11 84.25 29 6.86 Yes 28 1.04 Yes 0 0 No -28 0.64 No 42 46.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 14302105 - NM_001177315 RRAS2 1 0.1 0.33 17 2.18 80.12 20 5.57 Yes 7 1.34 Yes 0 0 No -19 0.59 No 51 68.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 14302108 - NM_001177315 RRAS2 1 0.12 0.39 19 3.8 82.77 17 5.29 No 4 1.37 Yes 0 0 No -21 0.44 No 45 59.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 14302245 - NM_001177315 RRAS2 1 0.1 0.28 13 5.73 92.92 16 5.2 No 58 0.6 No 0 0 No -26 0.45 No 44 15.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 14309411 - NM_001177315 RRAS2 1 0.16 0.49 27 3.01 0 49 7.94 Yes 36 1.83 Yes 0 0 No -48 0.63 No 22 74.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 14316408 - NM_001177315 RRAS2 1 0.1 0.25 16 -8.06 0 27 5.52 No 11 0.73 No 0 0 No -23 0.6 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 17596169 - NM_001042576 RRBP1 1 0.66 0.46 28 -4.13 0 9 3.87 No 23 1.47 Yes 0 0 No -35 0.89 Yes 35 94.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 17615131 - NM_001042576 RRBP1 1 0.31 0.18 12 10.29 78.62 34 5.28 No 73 0.4 No 0 0 No -20 0.4 No 50 70.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 17617372 - NM_001042576 RRBP1 1 0.14 0.15 8 -9.15 74.09 36 6.24 Yes 66 1.34 Yes 0 0 No -35 0.91 Yes 35 93.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 7182110 + NM_001003699 RREB1 1 0.72 0.46 25 0.92 0 17 4.12 No 35 1.19 Yes 0 0 No -32 0.75 Yes 38 70.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 7219200 + NM_001003699 RREB1 1 0.33 0.21 12 8.81 80.92 25 6.22 Yes 12 0.63 No 0 0 No -24 0.9 Yes 46 87.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 4153559 + NM_001318065 RRM1 1 0.03 0.11 8 5.09 77.03 35 3.92 No 48 0.87 Yes 0 0 No -19 0.89 Yes 51 86.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 10269146 + NM_001034 RRM2 1 0.02 0.29 18 1.78 0 13 4.36 No 27 0.02 No 23 0.91 Yes -28 0.46 No 42 46.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 10269170 + NM_001034 RRM2 1 0.01 0.17 9 -15.49 71.31 27 5.48 No 51 0.04 No 0 0 No -26 0.91 Yes 44 87.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103227627 - NM_001172477 RRM2B 1 0.34 0.68 30 8.25 86.15 36 7.35 Yes 23 1.45 Yes 0 0 No -35 0.69 Yes 35 66.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 103249226 - NM_001172477 RRM2B 1 1.32 0.6 28 0.68 0 20 4.47 No 64 -3.99 No 0 0 No -17 0.34 No 53 45.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 103249237 - NM_001172477 RRM2B 1 0.61 0.25 13 0.45 65.87 32 5.61 Yes 53 -4.26 No 0 0 No -31 0.92 Yes 39 93.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 15157110 - NM_018427 RRN3 1 0.58 0.61 33 7.74 85.86 15 3.94 No 2 1.11 Yes 0 0 No -18 0.66 No 52 81.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 15164051 - NM_018427 RRN3 1 0.85 0.64 29 5.12 76.06 50 6.94 Yes 72 0.78 Yes 0 0 No -29 0.9 Yes 41 83.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 15171164 - NM_018427 RRN3 1 0.23 0.21 13 5.89 87 18 5.28 No -4 0.31 No 0 0 No -18 0.41 No 52 65.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 15178237 - NM_018427 RRN3 1 0.75 0.86 39 9.83 89.66 42 7.8 Yes 65 0.62 No 0 0 No -23 0.64 No 47 73.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 15186421 - NM_018427 RRN3 1 0.23 0.19 11 6.05 75.73 23 5.91 Yes 10 1.28 Yes 0 0 No -22 0.74 Yes 48 88.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 21811095 - NR_003370 RRN3P1 1 3.98 0.67 28 5.12 76.06 30 7.03 Yes 72 0.78 Yes 0 0 No -29 0.89 Yes 41 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 29108513 + NR_003369 RRN3P2 1 36.23 1.78 57 5.12 76.06 50 6.94 Yes 72 0.14 No 29 0.93 Yes -29 0.9 Yes 41 83.06 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 29121779 + NR_003369 RRN3P2 1 1.04 0.14 10 12.26 94.92 32 5.66 Yes 69 1.33 Yes 0 0 No -26 0.76 Yes 44 69.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 22446072 - NR_027460 RRN3P3 1 3.69 1.14 47 5.12 76.06 30 7.03 Yes 72 0.78 Yes 0 0 No -29 0.89 Yes 41 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156702157 + NM_015997 RRNAD1 1 2.68 0.72 36 4.99 82.29 49 7.28 Yes 36 0.37 No 21 0.85 Yes -21 0.84 Yes 49 72.8 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 156702157 + NM_015997 RRNAD1 1 1.04 0.26 15 4.99 82.29 49 7.28 Yes 36 0.37 No 21 0.85 Yes -21 0.84 Yes 49 72.8 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 156705586 + NM_015997 RRNAD1 1 0.77 0.18 12 6.84 86.26 19 6 Yes 6 0.94 Yes 0 0 No -24 0.69 Yes 41 41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 156706410 + NM_015997 RRNAD1 1 16.1 6.99 71 3.88 69.06 36 5.39 No 23 0.61 No 22 0.84 Yes -35 0.65 No 35 79.32 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr21 45210828 + NM_003683 RRP1 1 0.07 0.1 7 7.74 83.71 16 4.24 No 8 1.09 Yes 0 0 No -20 0.63 No 50 64.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 45211403 + NM_003683 RRP1 1 0.1 0.14 9 6.72 82.18 27 4.69 No 14 0.66 No 0 0 No -26 0.9 Yes 45 69.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 45213149 + NM_003683 RRP1 1 0.07 0.14 8 9.07 82.03 15 6.56 Yes 2 1.78 Yes 0 0 No -22 0.75 Yes 48 65.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45217306 + NM_003683 RRP1 1 0.14 0.22 12 6.14 0 28 5.99 Yes 15 0.79 Yes 0 0 No -27 0.88 Yes 43 92.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45217306 + NM_003683 RRP1 1 1.75 2.43 59 6.14 0 28 5.99 Yes 15 0.79 Yes 0 0 No -27 0.88 Yes 43 92.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45218104 + NM_003683 RRP1 1 0.54 0.65 31 11.99 78.39 75 7.7 Yes 62 0.6 No 0 0 No -33 0.67 Yes 37 75.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 45221537 + NM_003683 RRP1 1 0.18 0.19 11 6.18 86.16 20 7.07 Yes 54 0.97 Yes 0 0 No -19 0.91 Yes 51 93.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45223201 + NM_003683 RRP1 1 0.33 0.21 12 -1.85 0 34 7.56 Yes 10 1.56 Yes 0 0 No -36 0.82 Yes 34 62.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 99118380 - NM_001284337 RRP12 1 0.11 0.14 10 0.93 70.45 21 5.66 Yes 8 1.85 Yes 23 0.94 Yes -20 0.53 No 50 71.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 99130833 - NM_001284337 RRP12 1 0.19 0.28 15 -9.86 0 9 3.87 No 13 1.75 Yes 0 0 No -25 0.93 Yes 45 89.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 99132956 - NM_001284337 RRP12 1 0.42 0.36 22 -0.38 81.23 16 5.86 Yes 3 0.79 Yes 0 0 No -23 0.56 No 47 49.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 99140666 - NM_001284337 RRP12 1 0.43 0.28 16 -0.96 0 27 7.12 Yes 14 1.78 Yes 0 0 No -26 0.91 Yes 44 87.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 218459015 + NM_016052 RRP15 1 0.14 0.13 7 10.33 85.9 29 5.34 No 16 0.43 No 0 0 No -29 0.59 No 41 69.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 218467500 + NM_016052 RRP15 1 0.08 0.1 7 6.44 87.25 30 6 Yes 17 1.21 Yes 0 0 No -29 0.95 Yes 41 96.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 218496077 + NM_016052 RRP15 1 3.8 4.33 65 8.83 90.78 29 7.14 Yes 50 1.28 Yes 0 0 No -28 0.7 Yes 46 58.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45093703 + NM_015056 RRP1B 1 0.17 0.29 18 3.2 69.03 44 6.67 Yes 31 1.01 Yes 0 0 No -38 0.45 No 32 66.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 45104434 + NM_015056 RRP1B 1 0.07 0.17 9 -13.88 0 27 5.19 No 14 0.79 Yes 0 0 No -26 0.97 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45113534 + NM_015056 RRP1B 1 0.11 0.22 14 5.08 76.85 26 5.17 No 73 0.5 No 0 0 No -25 0.89 Yes 45 79.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 45114578 + NM_015056 RRP1B 1 0.33 0.65 31 7.48 85.76 36 6.32 Yes 3 0.15 No 0 0 No -35 0.74 Yes 35 79.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 42993778 + NR_138081 RRP36 1 0.13 0.35 18 1.38 0 43 6.59 Yes 30 0.78 Yes 26 0.49 Yes -42 0.65 No 42 51.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 42996837 + NR_138081 RRP36 1 0.06 0.14 8 -1.57 0 15 4.1 No 24 1.13 Yes 0 0 No -36 0.76 Yes 34 90.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42911266 - NM_015703 RRP7A 1 0.5 1.25 40 2.1 0 12 4.24 No 15 1.91 Yes 0 0 No -27 0.83 Yes 43 90.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42912101 - NM_015703 RRP7A 1 0.16 0.49 23 4.33 74.68 19 6.78 Yes 58 1.77 Yes 0 0 No -25 0.38 No 52 60.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 42912303 - NM_015703 RRP7A 1 0.1 0.32 17 4.37 73.61 27 4.99 No 40 -3.33 No 27 0.56 Yes -27 0.68 Yes 43 75.25 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 42914735 - NM_015703 RRP7A 1 0.54 1.36 48 1.49 72.7 24 5 No 45 -4.54 No 23 0.95 Yes -23 0.95 Yes 47 95.22 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 42973096 - NR_002184 RRP7BP 1 0.35 0.24 13 2.1 0 12 4.24 No 15 1.91 Yes 0 0 No -27 0.83 Yes 43 90.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42973966 - NR_002184 RRP7BP 1 3.95 1 41 6.28 86.83 29 7.94 Yes 16 1.75 Yes 0 0 No -28 0.98 Yes 42 97.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42975206 - NR_002184 RRP7BP 1 9.09 2.49 61 11.58 95.65 32 8.42 Yes 19 1.28 Yes 0 0 No -31 0.86 Yes 39 81.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 6621454 - NM_015324 RRP8 1 0.23 0.15 10 3.62 74.21 37 6.07 Yes 24 1.5 Yes 0 0 No -32 0.54 No 38 69.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 6622616 - NM_015324 RRP8 1 0.2 0.22 13 8.49 90.93 12 5.05 No 73 -4.37 No 0 0 No -23 0.58 No 49 48.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 6623495 - NM_015324 RRP8 1 6.29 3.15 66 11.69 97.1 36 6.12 Yes 23 1.11 Yes 25 0.75 Yes -23 0.78 Yes 47 85.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 51970349 - NM_004704 RRP9 1 0.09 0.14 8 2.46 75.49 21 4.61 No 27 0.87 Yes 0 0 No -36 0.51 No 31 83.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 51970596 - NM_004704 RRP9 1 0.14 0.22 13 3.77 69.87 19 4.9 No 28 -0.8 No 26 0.64 Yes -28 0.62 No 43 72.63 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 51970599 - NM_004704 RRP9 1 0.44 0.76 31 4.61 77.9 16 4.65 No 25 -0.81 No 26 0.64 Yes -25 0.72 Yes 46 76.64 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 51971329 - NM_004704 RRP9 1 0.31 0.49 25 1.16 0 9 3.87 No 15 1.76 Yes 0 0 No -27 0.79 Yes 43 83.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 51971630 - NM_004704 RRP9 1 0.15 0.28 16 4.91 87.54 13 4.9 No 0 1.23 Yes 21 0.88 Yes -17 0.72 Yes 53 45.55 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 51975524 - NM_004704 RRP9 1 5 2.01 55 -9.85 0 38 5.94 Yes 0 1.08 Yes 28 0.79 Yes -12 0.76 Yes 58 76.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 77366803 + NM_198467 RSBN1L 1 2.49 1.56 48 8.82 85.82 26 6.8 Yes -2 0.4 No 0 0 No -25 0.91 Yes 45 93.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 77387309 + NM_198467 RSBN1L 1 0.58 0.47 24 6.52 91.81 31 4.62 No 18 0.56 No 0 0 No -30 0.85 Yes 40 77.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 77396456 + NM_198467 RSBN1L 1 0.16 0.18 12 2.57 82.27 151 12.97 Yes NA NA NA 0 0 No -58 0.43 No 46 70.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 77399260 + NM_198467 RSBN1L 1 0.23 0.26 16 4.7 74.17 22 6.21 Yes 48 0.62 No 0 0 No -21 0.67 Yes 49 81.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 77407950 + NM_198467 RSBN1L 1 3.95 3.51 67 4.93 86.09 20 5.6 Yes 7 1.12 Yes 28 0.58 Yes -28 0.66 No 42 67.41 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 77383237 - NM_016578 RSF1 1 2.55 1.94 58 3.19 75.35 22 4.07 No 0 0.5 No 0 0 No -21 0.77 Yes 49 61.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 77405419 - NM_016578 RSF1 1 0.29 0.24 12 6.25 85.19 32 5.74 Yes 19 0.77 Yes 0 0 No -31 0.84 Yes 39 67.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 77410859 - NM_016578 RSF1 1 2.11 1.43 53 8.17 93.4 36 6 Yes 42 1.01 Yes 0 0 No -29 0.65 No 41 64.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 77433787 - NM_016578 RSF1 1 0.42 0.24 13 10.19 92.6 34 6.7 Yes 21 1.47 Yes 0 0 No -27 0.82 Yes 37 74.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77435017 - NM_016578 RSF1 1 1.05 0.61 34 7.87 77.33 28 5.42 No 2 1.07 Yes 0 0 No -27 0.88 Yes 43 92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77449173 - NM_016578 RSF1 1 0.18 0.14 8 10.05 88.27 34 9.6 Yes 52 1.88 Yes 0 0 No -33 0.89 Yes 37 88.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77524748 - NM_016578 RSF1 1 7.24 2.28 57 -11.95 0 10 4 No 17 1.21 Yes 29 0.85 Yes -29 0.86 Yes 41 79.21 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 77524755 - NM_016578 RSF1 1 8.46 2.71 60 -1.28 75.43 23 4.95 No 10 1.22 Yes 29 0.85 Yes -22 0.87 Yes 48 84.69 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 77524794 - NM_016578 RSF1 1 0.56 0.18 11 8.64 86.85 9 5.74 Yes -4 0.2 No 0 0 No -26 0.6 No 44 48.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 77524834 - NM_016578 RSF1 1 0.53 0.13 8 -1.47 72.56 86 10.36 Yes 73 1.22 Yes 0 0 No -25 0.35 No 43 36.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 11934230 - NM_015659 RSL1D1 1 0.01 0.11 7 3.44 80.68 31 5.64 Yes 33 0.89 Yes 0 0 No -30 0.86 Yes 40 87.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11934418 - NM_015659 RSL1D1 1 0.04 0.32 17 0.14 0 27 5.24 No 59 1.04 Yes 0 0 No -29 0.46 No 31 51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 11935675 - NM_015659 RSL1D1 1 0.56 3.13 68 1.63 77.04 23 6.2 Yes 51 0.59 No 29 0.51 Yes -22 0.47 No 48 53.35 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 11935705 - NM_015659 RSL1D1 1 0.03 0.15 10 -6.47 0 13 4.24 No 21 0.56 No 29 0.51 Yes -38 0.4 No 29 29.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 11935787 - NM_015659 RSL1D1 1 0.02 0.15 11 2.85 75.17 25 5.77 Yes 12 0.01 No 24 0.4 Yes -24 0.8 Yes 42 46.96 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 11943243 - NM_015659 RSL1D1 1 0.06 0.38 19 8.71 85.05 28 7.84 Yes 70 0.76 No 27 0.75 Yes -27 0.71 Yes 43 85.1 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 55485024 - NM_016304 RSL24D1 1 0.02 0.15 11 1.64 0 16 4.12 No 9 0.98 Yes 0 0 No -37 0.39 No 40 56.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 55486558 - NM_016304 RSL24D1 1 0.04 0.24 13 5.58 77.15 73 6.77 Yes 14 1.08 Yes 26 0.63 Yes -27 0.66 Yes 43 72.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 55487790 - NM_016304 RSL24D1 1 0.02 0.11 7 6.74 92.13 32 7.17 Yes 0 0.52 No 23 0.8 Yes -23 0.7 Yes 47 71.79 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 55488021 - NM_016304 RSL24D1 1 0.05 0.31 20 9.53 82.79 29 5.48 No 16 1.93 Yes 0 0 No -28 0.85 Yes 42 85.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57241504 + NM_001305163 RSPRY1 1 5.4 7.46 72 0.38 0 22 4.58 No 29 0.81 Yes 21 0.9 Yes -21 0.89 Yes 49 84.2 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 57241507 + NM_001305163 RSPRY1 1 0.1 0.15 9 -2.26 69.81 25 4.9 No 32 0.8 Yes 0 0 No -24 0.9 Yes 46 82.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57250021 + NM_001305163 RSPRY1 1 0.14 0.18 12 2.18 79.01 42 7.55 Yes 29 1.17 Yes 0 0 No -41 0.91 Yes 29 86.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 57250152 + NM_001305163 RSPRY1 1 0.09 0.13 7 4.64 83.1 20 7.45 Yes 30 1.38 Yes 0 0 No -30 0.56 No 40 62.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 157841660 + NM_001271834 RSRC1 1 0.26 0.46 23 0.35 0 14 3.87 No 18 0.38 No 0 0 No -30 0.45 No 36 59.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 158017617 + NM_001271834 RSRC1 1 0.09 0.15 8 3.53 79.73 42 6.94 Yes 29 1.14 Yes 0 0 No -25 0.68 Yes 45 66.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 158020470 + NM_001271834 RSRC1 1 0.23 0.35 20 4.58 84.41 42 7.55 Yes 29 2.88 Yes 41 0.73 Yes -41 0.57 No 29 84.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 158052293 + NM_001271834 RSRC1 1 0.08 0.11 7 9.34 85.05 29 5.48 No 16 1.48 Yes 0 0 No -28 0.92 Yes 42 96.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 158173399 + NM_001271834 RSRC1 1 0.39 0.51 29 9.09 84.38 25 5.29 No 12 1.29 Yes 0 0 No -24 0.89 Yes 46 90.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 158179645 + NM_001271834 RSRC1 1 0.21 0.22 14 2.23 75.72 23 4.53 No 10 0.23 No 0 0 No -22 0.92 Yes 48 84.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 122992998 - NR_036435 RSRC2 1 106.99 114.76 72 6.41 78.69 27 6.97 Yes 51 0.52 No 27 0.61 Yes -26 0.51 No 44 46.32 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 122998422 - NR_036435 RSRC2 1 1.08 1.97 55 6.53 86.16 20 6.4 Yes 7 1.22 Yes 19 0.75 Yes -19 0.77 Yes 51 91.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 122999276 - NR_036435 RSRC2 1 0.38 0.64 26 8.59 74.98 38 6.87 Yes 25 1.17 Yes 26 0.76 Yes -26 0.58 No 33 55.12 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 123003577 - NR_036435 RSRC2 1 75.11 10.49 72 6.46 87.99 27 5.43 No 40 2.02 Yes 26 0.9 Yes -26 0.3 No 44 44.31 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 123003577 - NR_036435 RSRC2 1 418.92 54.78 72 6.46 87.99 27 5.43 No 40 2.02 Yes 26 0.9 Yes -26 0.3 No 44 44.31 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 123006842 - NR_036435 RSRC2 1 0.15 0.21 13 -0.16 0 29 4.52 No 16 0.63 No 23 0.79 Yes -28 0.41 No 45 37.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 123007454 - NR_036435 RSRC2 1 0.57 0.81 29 5.22 76.16 29 4.27 No 0 0.62 No 28 0.46 Yes -29 0.47 No 41 53.8 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 123010841 - NR_036435 RSRC2 1 0.15 0.24 13 -1.1 0 30 6.71 Yes 17 0.73 No 29 0.72 Yes -29 0.52 No 41 39.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 16725946 - NM_012425 RSU1 1 0.06 0.14 8 7.51 88.27 31 5.52 No 18 1.12 Yes 0 0 No -30 0.4 No 39 59.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 16729620 - NM_012425 RSU1 1 0.12 0.24 15 5.81 84.48 25 5.14 No 60 1.03 Yes 0 0 No -29 0.61 No 41 68.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 16735693 - NM_012425 RSU1 1 0.07 0.15 9 9.42 93.04 21 5.66 Yes 8 1.1 Yes 0 0 No -20 0.77 Yes 50 89.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 16763284 - NM_012425 RSU1 1 0.05 0.13 7 9.82 88.7 51 8.16 Yes 38 1.31 Yes 0 0 No -27 0.77 Yes 43 90.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 16765208 - NM_012425 RSU1 1 0.04 0.11 8 8.86 90.91 21 6.58 Yes 8 1.91 Yes 0 0 No -20 0.67 Yes 50 50.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 16794427 - NM_012425 RSU1 1 0.13 0.31 16 5.29 81.39 56 5.88 Yes 29 1.08 Yes 0 0 No -41 0.66 No 29 69.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 100732721 + NM_001130841 RTCA 1 10.84 0.51 32 7.2 74.74 32 5.62 Yes 12 1.37 Yes 24 0.87 Yes -31 0.57 No 39 77.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 100733629 + NM_001130841 RTCA 1 25.89 1.75 57 9.18 86.66 29 5.92 Yes 25 0.62 No 26 0.76 Yes -26 0.78 Yes 44 75.81 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 100733692 + NM_001130841 RTCA 1 43.12 2.47 64 2.31 78.41 22 5.83 Yes 47 -5.09 No 21 0.92 Yes -21 0.66 No 49 52.8 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 100733692 + NM_001130841 RTCA 1 1.68 0.14 9 2.31 78.41 22 5.83 Yes 47 -5.09 No 21 0.92 Yes -21 0.66 No 49 52.8 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 100736134 + NM_001130841 RTCA 1 0.63 0.94 42 9.18 86.26 25 5.29 No 33 0.64 No 0 0 No -24 0.69 Yes 46 80.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100736174 + NM_001130841 RTCA 1 0.16 0.24 14 8.05 86.62 36 5.64 Yes 23 0.71 No 0 0 No -35 0.92 Yes 35 88.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100753374 + NM_001130841 RTCA 1 0.3 0.68 29 4.19 0 34 6.16 Yes 38 0.8 Yes 0 0 No -31 0.67 Yes 39 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 32787694 - NM_014306 RTCB 1 0.03 0.13 8 8.68 80.87 26 5.28 No 13 1.91 Yes 0 0 No -25 0.91 Yes 45 94.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 32792225 - NM_014306 RTCB 1 0.03 0.15 8 -1.04 0 15 4.58 No 55 1.01 Yes 0 0 No -43 0.9 Yes 27 94.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62293096 + NM_001283010 RTEL1 1 2.74 1.04 43 1.46 69.72 25 3.94 No 23 0.73 No 0 0 No -24 0.32 No 46 74.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 62293114 + NM_001283010 RTEL1 1 5.25 1.96 56 6.77 89.01 21 5.2 No 41 0.73 No 0 0 No -20 0.62 No 50 75.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 62293748 + NM_001283010 RTEL1 1 0.56 0.19 13 9.58 76.62 23 5.39 No NA NA NA 0 0 No -22 0.41 No 48 72.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 62293826 + NM_001283010 RTEL1 1 1.2 0.5 26 10.35 82.64 32 5.57 Yes 29 1.47 Yes 0 0 No -31 0.9 Yes 39 85.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62306624 + NM_001283010 RTEL1 1 0.92 0.18 12 7.44 75.87 30 5.48 No 72 0.36 No 0 0 No -29 0.66 No 41 75.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 62309421 + NM_001283010 RTEL1 1 1.06 0.22 15 10.28 95.5 28 14 Yes NA NA NA 0 0 No -27 0.8 Yes 43 81.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62311114 + NM_001283010 RTEL1 1 0.34 0.13 8 8.48 87.93 22 5 No 60 1.19 Yes 0 0 No -21 0.9 Yes 49 87.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62312226 + NM_001283010 RTEL1 1 0.59 0.19 12 5.83 82.39 28 7.62 Yes 15 0.92 Yes 0 0 No -27 0.89 Yes 43 95.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62317356 + NM_001283010 RTEL1 1 16.89 2.61 61 8.21 91.91 30 7.16 Yes NA NA NA 0 0 No -29 0.63 No 41 54.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62321318 + NM_001283010 RTEL1 1 0.69 0.21 14 7.52 84.26 19 4.91 No 6 -0.29 No 0 0 No -18 0.52 No 49 71.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 62321638 + NM_001283010 RTEL1 1 0.72 0.18 10 -3.95 0 15 5.45 No 60 0.27 No 0 0 No -30 0.53 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62325671 + NM_001283010 RTEL1 1 1.68 0.53 26 9.11 81.27 22 4.12 No 28 0.19 No 0 0 No -25 0.65 No 49 62.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41731869 + NM_015138 RTF1 1 0.14 0.17 10 2.75 83 30 6.74 Yes 22 0.78 Yes 0 0 No -34 0.63 No 36 74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41732409 + NM_015138 RTF1 1 0.17 0.14 8 2.8 83.92 36 4.99 No 20 1.06 Yes 26 0.79 Yes -35 0.46 No 35 68.93 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 41765948 + NM_015138 RTF1 1 0.2 0.26 16 10.18 86.87 23 7.35 Yes 10 1.31 Yes 0 0 No -22 0.79 Yes 48 82.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41768378 + NM_015138 RTF1 1 0.87 1.49 52 8.02 80.55 21 5.32 No 18 0.71 No 0 0 No -30 0.45 No 40 42.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 55092164 + NM_001283035 RTFDC1 1 2.84 10.51 72 0.39 77.68 62 8.69 Yes 49 1.42 Yes 0 0 No -39 0.54 No 31 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 55092170 + NM_001283035 RTFDC1 1 0.04 0.15 10 -7.73 0 14 3.87 No 55 1.4 Yes 0 0 No -59 0.74 Yes 25 88.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74654122 - NM_033046 RTKN 1 1.46 0.31 16 8.99 77.36 44 7.47 Yes 31 1.91 Yes 0 0 No -43 0.94 Yes 27 97.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74655443 - NM_033046 RTKN 1 0.54 0.13 7 -1.98 59.59 37 6.4 Yes 24 0.38 No 0 0 No -36 0.71 Yes 34 51.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 63521152 + NM_001265589 RTN3 1 0.05 0.13 9 5.27 84.17 17 4.85 No 54 1.19 Yes 0 0 No -23 0.92 Yes 47 92.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 55201002 - NM_001321859 RTN4 1 0.05 0.22 13 -20.94 0 28 5.57 Yes 51 0.39 No 0 0 No -27 0.71 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 55201024 - NM_001321859 RTN4 1 0.04 0.21 12 5.11 77.76 21 6.4 Yes 29 0.38 No 25 0.84 Yes -34 0.54 No 36 73.16 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 55201900 - NM_001321859 RTN4 1 0.06 0.18 12 -13.29 0 19 7.27 Yes 6 1.57 Yes 0 0 No -27 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67671405 - NM_173630 RTTN 1 0.89 0.92 45 3.39 68.56 40 7.67 Yes 27 1.13 Yes 24 0.6 Yes -39 0.68 Yes 31 78.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 67672185 - NM_173630 RTTN 1 0.4 0.4 21 6.87 87 19 8.73 Yes 29 1.08 Yes 0 0 No -30 0.9 Yes 40 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 67672494 - NM_173630 RTTN 1 0.25 0.22 14 -4.18 0 13 4.36 No 12 0.56 No 0 0 No -28 0.78 Yes 42 77.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 67675388 - NM_173630 RTTN 1 0.37 0.25 13 9.78 90.52 20 6.24 Yes 7 1.72 Yes 0 0 No -19 0.47 No 51 79.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 67684824 - NM_173630 RTTN 1 2.11 1.4 52 3.72 79.6 19 4.83 No 6 1.46 Yes 0 0 No -27 0.43 No 47 57.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67684880 - NM_173630 RTTN 1 0.32 0.24 13 5.54 79.81 21 5 No 42 0.66 No 20 0.94 Yes -20 0.85 Yes 50 94.41 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 67685771 - NM_173630 RTTN 1 0.13 0.1 7 7.25 80.29 27 5.5 No 32 0.58 No 0 0 No -26 0.37 No 44 57.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 67687157 - NM_173630 RTTN 1 0.82 0.56 30 6.94 87.99 32 5.68 Yes 19 0.5 No 26 0.9 Yes -32 0.6 No 38 69.44 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 67689485 - NM_173630 RTTN 1 0.91 0.9 29 10.37 88.34 25 6.15 Yes 32 0.28 No 0 0 No -24 0.63 No 40 64.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 67698239 - NM_173630 RTTN 1 0.18 0.14 9 1.4 0 19 5.55 No 6 0.21 No 28 0.65 Yes -24 0.52 No 46 76.79 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr18 67698272 - NM_173630 RTTN 1 0.25 0.17 10 6.41 83.09 29 5.46 No 76 -3.76 No 0 0 No -28 0.69 Yes 42 58.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 67715423 - NM_173630 RTTN 1 0.21 0.14 7 -10.04 0 25 5.7 Yes 5 0.67 No 0 0 No -24 0.91 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 67720751 - NM_173630 RTTN 1 0.3 0.18 9 7.49 83.08 36 3.82 No 39 1.39 Yes 0 0 No -24 0.56 No 46 56.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67723624 - NM_173630 RTTN 1 0.44 0.25 13 4.28 79.24 17 5.1 No 4 1.05 Yes 0 0 No -31 0.59 No 47 72.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 67725094 - NM_173630 RTTN 1 0.43 0.39 21 3.57 81.3 27 3.56 No 29 1.15 Yes 28 0.84 Yes -26 0.64 No 44 59.61 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 67727180 - NM_173630 RTTN 1 0.91 0.64 30 8.06 88.89 64 6.54 Yes 54 0.86 Yes 0 0 No -36 0.31 No 34 45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67728637 - NM_173630 RTTN 1 0.22 0.17 8 7.72 84.2 43 5.98 Yes 67 -3.39 No 21 0.29 Yes -38 0.45 No 42 41.51 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 67745975 - NM_173630 RTTN 1 0.36 0.26 18 7.76 85.25 27 5.03 No 67 0.68 No 0 0 No -26 0.93 Yes 44 94.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 67758917 - NM_173630 RTTN 1 1.13 0.96 38 5.43 76.53 25 5.89 Yes 12 1.57 Yes 24 0.88 Yes -24 0.89 Yes 46 81.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 67770528 - NM_173630 RTTN 1 4.94 2.13 53 1.25 57.8 65 7.85 Yes 44 1.98 Yes 0 0 No -56 0.88 Yes 14 87.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 67773573 - NM_173630 RTTN 1 1.3 0.4 20 3.13 0 45 9.26 Yes 32 0.4 No 0 0 No -45 0.43 No 25 34.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 67776917 - NM_173630 RTTN 1 0.39 0.25 17 7.17 83.43 18 6.78 Yes 49 0.64 No 0 0 No -26 0.64 No 44 50.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 67776917 - NM_173630 RTTN 1 0.17 0.11 7 7.17 83.43 18 6.78 Yes 49 0.64 No 0 0 No -26 0.64 No 44 50.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 67777794 - NM_173630 RTTN 1 0.44 0.28 15 5.06 83.19 26 5.08 No 40 -1.87 No 0 0 No -26 0.73 Yes 49 60.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 67785861 - NM_173630 RTTN 1 0.18 0.18 11 7.46 84.65 18 5.65 Yes 5 0.94 Yes 0 0 No -25 0.83 Yes 46 82.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 67795335 - NM_173630 RTTN 1 0.36 0.19 13 5.96 79.08 20 4.94 No 0 1.04 Yes 0 0 No -19 0.44 No 51 47.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67801616 - NM_173630 RTTN 1 0.2 0.24 15 5.35 75.89 23 6.33 Yes 61 1.13 Yes 0 0 No -23 0.75 Yes 47 64.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 67806192 - NM_173630 RTTN 1 1.29 0.69 31 7.79 86.46 27 6.48 Yes 14 1.37 Yes 0 0 No -26 0.72 Yes 44 82.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 67812975 - NM_173630 RTTN 1 0.8 0.56 29 5.23 83.35 19 5 No 35 0.3 No 0 0 No -26 0.77 Yes 52 57.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 67817327 - NM_173630 RTTN 1 3.11 2.64 65 -2.9 72.68 51 6.37 Yes 38 0.74 No 23 0.85 Yes -28 0.85 Yes 42 73.7 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 67817389 - NM_173630 RTTN 1 0.76 0.61 33 6.9 74.43 38 6.18 Yes 25 0.15 No 29 0.6 Yes -37 0.65 No 33 68.86 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 67828696 - NM_173630 RTTN 1 0.31 0.17 11 1.01 0 24 6.3 Yes 11 0.7 No 0 0 No -23 0.88 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 67829748 - NM_173630 RTTN 1 0.86 0.61 30 4.15 66.75 56 6.27 Yes 54 1.16 Yes 0 0 No -30 0.34 No 25 60.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67836210 - NM_173630 RTTN 1 7.09 3.42 65 0.91 63.1 57 5.64 Yes 68 -1.92 No 31 0.21 Yes -31 0.47 No 31 69.09 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 67847140 - NM_173630 RTTN 1 3.46 1.36 48 8.39 83.94 25 5.29 No 12 0.82 Yes 0 0 No -24 0.79 Yes 46 93.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 67855456 - NM_173630 RTTN 1 0.2 0.14 9 0.27 0 43 7.26 Yes 30 1.66 Yes 0 0 No -42 0.63 No 28 80.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 67860398 - NM_173630 RTTN 1 2.95 1.31 52 3.63 69.22 51 7.7 Yes 70 1.07 Yes 0 0 No -50 0.64 No 20 67.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67861973 - NM_173630 RTTN 1 0.46 0.21 12 12.53 89.05 35 7.26 Yes 22 1.58 Yes 0 0 No -30 0.64 No 36 57.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 67866761 - NM_173630 RTTN 1 0.95 0.38 21 1.86 69.51 43 8.03 Yes 22 0.76 No 25 0.56 Yes -42 0.46 No 28 62.29 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 197418020 - NM_001145642 RUBCN 1 21.45 29.89 72 6.77 82.88 32 6.16 Yes 19 0.68 No 31 0.82 Yes -31 0.82 Yes 39 89.37 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 197419481 - NM_001145642 RUBCN 1 0.27 0.38 19 4.48 85.1 74 7.02 Yes 22 0.66 No 0 0 No -27 0.62 No 43 57.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 197422850 - NM_001145642 RUBCN 1 2.26 3.53 69 1.38 75.66 44 6.29 Yes 13 0.42 No 0 0 No -25 0.92 Yes 45 86.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 197430541 - NM_001145642 RUBCN 1 0.25 0.32 14 3.52 74.88 23 5.48 No 10 1.48 Yes 25 0.66 Yes -22 0.81 Yes 48 89.96 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 197433548 - NM_001145642 RUBCN 1 0.33 0.29 17 2.55 0 42 8.43 Yes 29 1.19 Yes 0 0 No -41 0.84 Yes 29 71.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 197433552 - NM_001145642 RUBCN 1 0.93 0.82 38 7.43 83.64 38 8.18 Yes 25 1.2 Yes 0 0 No -37 0.83 Yes 33 71.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46924415 - NM_001286761 RUBCNL 1 0.87 0.38 19 6.14 78.45 22 6.32 Yes 9 1.38 Yes 0 0 No -21 0.79 Yes 49 76.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46942360 - NM_001286761 RUBCNL 1 0.37 0.38 17 10.86 92.76 16 5.83 Yes 73 0.91 Yes 0 0 No -27 0.54 No 43 73.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 46942751 - NM_001286761 RUBCNL 1 1.09 0.88 25 3.56 0 21 4.58 No 39 -3.2 No 0 0 No -18 0.57 No 50 49.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46945784 - NM_001286761 RUBCNL 1 0.5 0.24 11 5.34 85.68 17 5.06 No 36 0.1 No 0 0 No -23 0.85 Yes 47 82.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 178982650 + NM_025158 RUFY1 1 2.14 0.24 16 3.67 82.57 43 6.35 Yes 38 1.35 Yes 31 0.48 Yes -31 0.62 No 39 70.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 178987920 + NM_025158 RUFY1 1 0.65 0.28 15 2.51 65.54 65 7.89 Yes 74 0.87 Yes 0 0 No -23 0.75 Yes 43 52.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 178989852 + NM_025158 RUFY1 1 0.18 0.11 7 1.63 55.92 35 5.58 Yes 22 1.44 Yes 0 0 No -34 0.82 Yes 36 67.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 178990383 + NM_025158 RUFY1 1 0.44 0.18 11 7.79 84.24 41 6.71 Yes 13 0.9 Yes 0 0 No -25 0.96 Yes 45 94.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 178994466 + NM_025158 RUFY1 1 0.43 0.25 15 1.44 0 26 6.08 Yes 60 0.96 Yes 0 0 No -25 0.63 No 45 65.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 179002241 + NM_025158 RUFY1 1 1.09 0.74 33 8.11 86.94 23 6.43 Yes 4 0.56 No 0 0 No -22 0.36 No 40 41.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179007723 + NM_025158 RUFY1 1 0.14 0.13 9 4.59 87.48 36 5.46 No 23 1.03 Yes 0 0 No -22 0.92 Yes 48 93.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179013331 + NM_025158 RUFY1 1 5.27 5.79 71 12.22 85.4 32 6 Yes 42 -0.4 No 31 0.44 Yes -29 0.64 No 39 77.68 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 179017861 + NM_025158 RUFY1 1 0.51 0.43 25 6.64 83.81 24 7.88 Yes 11 1.29 Yes 23 0.8 Yes -32 0.61 No 38 65.28 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 179034275 + NM_025158 RUFY1 1 0.12 0.13 7 4.25 86.2 25 5.29 No 62 -3.04 No 0 0 No -24 0.4 No 54 43.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179035285 + NM_025158 RUFY1 1 1.19 1.06 49 8.99 78.07 26 4.5 No 71 -1.93 No 29 0.53 Yes -33 0.51 No 39 60.61 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 179035490 + NM_025158 RUFY1 1 0.48 0.43 22 6.02 85.29 19 5.72 Yes 0 0.83 Yes 0 0 No -28 0.7 Yes 52 72.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70105702 - NR_103475 RUFY2 1 1.3 0.15 9 3.88 76.4 14 5.91 Yes 1 1.27 Yes 37 0.49 Yes -23 0.62 No 47 64.27 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 70113081 - NR_103475 RUFY2 1 3.35 0.38 19 4.98 0 27 6.16 Yes 76 0.96 Yes 0 0 No -26 0.93 Yes 44 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 70136773 - NR_103475 RUFY2 1 66.77 5.46 71 6.94 78.09 62 4.63 No 5 1.13 Yes 27 0.81 Yes -49 0.55 No 21 65.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 70136773 - NR_103475 RUFY2 1 4.57 0.42 24 6.94 78.09 62 4.63 No 5 1.13 Yes 27 0.81 Yes -49 0.55 No 21 65.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 70138428 - NR_103475 RUFY2 1 4.85 0.38 21 1.72 69.83 111 13.97 Yes 29 1.08 Yes 24 0.75 Yes -41 0.44 No 29 82.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 70139298 - NR_103475 RUFY2 1 2.01 0.26 14 0.85 57.39 73 9.11 Yes 60 0.84 Yes 26 0.59 Yes -24 0.26 No 40 25.37 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 70145883 - NR_103475 RUFY2 1 4.27 0.6 31 3.87 81.38 28 4.11 No 58 0.84 Yes 0 0 No -31 0.75 Yes 39 68.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 71656941 + NM_001291993 RUFY3 1 4.44 0.79 32 5.78 83.89 86 9.61 Yes 73 2.86 Yes 23 0.92 Yes -23 0.76 Yes 31 79.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 71659481 + NM_001291993 RUFY3 1 7.99 1.54 57 5.17 80.21 46 7.01 Yes 33 0.81 Yes 27 0.74 Yes -31 0.57 No 43 81.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 71659562 + NM_001291993 RUFY3 1 0.96 0.13 7 9.37 81.31 27 5.73 Yes 14 0.41 No 22 0.58 Yes -26 0.64 No 44 56.73 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 71662379 + NM_001291993 RUFY3 1 1.26 0.28 12 6.09 77.63 23 7.64 Yes 10 0.98 Yes 0 0 No -22 0.8 Yes 48 65.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41142864 + NM_001321381 RUNDC1 1 2.82 1.32 50 2.57 76.4 23 4.97 No 10 1.36 Yes 25 0.96 Yes -22 0.87 Yes 48 83.96 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 36170390 - NM_001001890 RUNX1 1 0.5 0.13 8 9.21 88.46 17 6.79 Yes 4 1.06 Yes 0 0 No -27 0.62 No 43 63.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 36193994 - NM_001001890 RUNX1 1 0.59 0.17 8 4.22 78.82 41 7.16 Yes 5 -0.52 No 40 0.21 Yes -40 0.89 Yes 30 94.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 25229893 - NM_001320672 RUNX3 1 0.03 0.11 7 3.29 76.72 26 6.48 Yes 13 2.04 Yes 0 0 No -25 0.92 Yes 45 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 25230877 - NM_001320672 RUNX3 1 0.3 1.04 40 2.89 77.63 19 4.29 No -4 0.42 No 0 0 No -35 0.29 No 34 38.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 25232596 - NM_001320672 RUNX3 1 0.99 3.56 65 6.13 83.72 13 5.6 Yes 0 0.68 No 0 0 No -29 0.77 Yes 41 70.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25232853 - NM_001320672 RUNX3 1 0.76 2.82 60 8.63 84.26 34 7.35 Yes 21 0.65 No 0 0 No -29 0.68 Yes 37 63.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 25234016 - NM_001320672 RUNX3 1 0.16 0.5 27 4.24 83.03 22 4.79 No 66 0.53 No 0 0 No -21 0.94 Yes 49 92.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25239184 - NM_001320672 RUNX3 1 0.24 0.79 33 5.92 68.35 23 5.39 No 10 0.71 No 0 0 No -22 0.68 Yes 48 87.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25240730 - NM_001320672 RUNX3 1 0.12 0.39 23 4.08 79.9 27 5.26 No 76 -5.41 No 0 0 No -26 0.89 Yes 44 81.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25240733 - NM_001320672 RUNX3 1 0.05 0.17 11 2.47 75.36 24 4.97 No 73 -5.22 No 0 0 No -23 0.92 Yes 47 88.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25240978 - NM_001320672 RUNX3 1 0.04 0.13 9 8.02 90.43 24 6.13 Yes 0 0.29 No 0 0 No -23 0.75 Yes 47 81.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25244043 - NM_001320672 RUNX3 1 0.23 0.81 34 5.61 78.51 18 5.17 No 5 1.02 Yes 0 0 No -17 0.57 No 53 65.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 25244082 - NM_001320672 RUNX3 1 0.04 0.13 7 3.87 83.02 22 4.89 No 60 -2.33 No 0 0 No -21 0.93 Yes 49 93.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25282772 - NM_001320672 RUNX3 1 15.42 5.1 70 7.74 95.2 31 4.68 No 75 1.94 Yes 0 0 No -25 0.73 Yes 45 86.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 25282970 - NM_001320672 RUNX3 1 0.95 0.31 14 5.07 90.04 26 4.59 No 62 -2.62 No 0 0 No -23 0.82 Yes 47 62.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 155295205 + NM_001278230 RUSC1 1 2.96 1.07 45 -5.59 54.12 49 9.06 Yes 36 2.3 Yes 0 0 No -48 0.71 Yes 22 84.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155295217 + NM_001278230 RUSC1 1 0.26 0.11 7 -2.76 0 16 4.58 No 48 2.29 Yes 0 0 No -60 0.35 No 10 46.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 155295391 + NM_001278230 RUSC1 1 0.43 0.17 9 3.51 61.77 37 6 Yes 42 1.72 Yes 29 0.76 Yes -29 0.3 No 41 74.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 155296400 + NM_001278230 RUSC1 1 0.67 0.39 21 9.41 79.61 33 6.24 Yes 40 1.17 Yes 32 0.5 Yes -52 0.59 No 18 73.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 155296688 + NM_001278230 RUSC1 1 8 4.28 70 6.13 87.1 25 6.48 Yes 12 1.44 Yes 24 0.93 Yes -24 0.91 Yes 46 93.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 155296793 + NM_001278230 RUSC1 1 0.41 0.21 15 -0.35 73.02 49 7.42 Yes 36 0.81 Yes 0 0 No -48 0.84 Yes 22 82.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155300170 + NM_001278230 RUSC1 1 0.18 0.1 7 3.93 79.7 13 5.47 No 0 1.4 Yes 30 0.88 Yes -23 0.73 Yes 47 67.97 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 127806688 - NM_001319086 RUVBL1 1 0.21 0.65 33 8.88 89.93 23 5.39 No 30 0.01 No 22 0.51 Yes -22 0.69 Yes 48 79.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 127810426 - NM_001319086 RUVBL1 1 0.34 1.04 44 9.69 84.64 28 5.57 Yes 70 -2.66 No 0 0 No -27 0.4 No 43 66.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 127811850 - NM_001319086 RUVBL1 1 0.07 0.24 12 4.09 79 60 10.65 Yes 47 1.12 Yes 0 0 No -46 0.83 Yes 24 84.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127811853 - NM_001319086 RUVBL1 1 0.07 0.24 14 6.27 81.23 57 10.51 Yes 44 1.13 Yes 0 0 No -43 0.84 Yes 27 86.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127819582 - NM_001319086 RUVBL1 1 0.07 0.19 14 -4.82 0 10 3.87 No 14 1.58 Yes 0 0 No -37 0.67 Yes 44 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127827536 - NM_001319086 RUVBL1 1 0.05 0.14 9 -2.52 83.84 26 5.66 Yes 13 0.96 Yes 0 0 No -25 0.91 Yes 45 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49497761 + NM_001321190 RUVBL2 1 0.43 0.4 23 5.13 88.8 34 7.61 Yes 21 0.46 No 28 0.7 Yes -28 0.62 No 42 76.34 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 49498032 + NM_001321190 RUVBL2 1 0.99 1.04 43 -4.28 47.71 42 7.73 Yes 49 -2.31 No 24 0.32 Yes -20 0.41 No 37 24.08 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 49502579 + NM_001321190 RUVBL2 1 0.65 0.72 39 1.03 0 27 6.48 Yes 14 1.93 Yes 22 0.9 Yes -26 0.92 Yes 44 94.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 49507910 + NM_001321190 RUVBL2 1 0.06 0.14 7 5.94 76.02 25 7.21 Yes 12 1.61 Yes 0 0 No -24 0.95 Yes 46 95.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49510514 + NM_001321190 RUVBL2 1 0.1 0.31 16 -8.24 77.41 23 4.9 No 10 -0.66 No 0 0 No -22 0.97 Yes 48 96.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49510521 + NM_001321190 RUVBL2 1 0.11 0.32 16 -1.17 0 17 4 No 17 -1.1 No 19 0.62 Yes -29 0.96 Yes 41 95.16 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 49513759 + NM_001321190 RUVBL2 1 0.04 0.14 10 -3.38 0 12 4.2 No 55 1.48 Yes 0 0 No -46 0.19 No 51 15.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 49513846 + NM_001321190 RUVBL2 1 0.06 0.14 8 7.07 82.59 19 5.52 No 6 -0.49 No 0 0 No -23 0.58 No 47 60.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49518835 + NM_001321190 RUVBL2 1 0.13 0.29 17 -2 0 10 4 No 17 0.26 No 0 0 No -29 0.82 Yes 41 73.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49519076 + NM_001321190 RUVBL2 1 0.77 1.81 61 2.3 75.16 31 7.87 Yes 18 1.78 Yes 0 0 No -30 0.93 Yes 40 91.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 116893584 + NM_016104 RWDD1 1 33.52 1.31 49 10.45 91.02 31 6.08 Yes 30 0.2 No 28 0.5 Yes -28 0.44 No 49 60.96 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 116896945 + NM_016104 RWDD1 1 0.7 0.47 25 4.98 73.95 25 5.2 No 12 1.42 Yes 0 0 No -24 0.88 Yes 46 93.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 83904249 + NM_001322336 RWDD2A 1 6.51 0.69 29 3.64 76.43 42 6.56 Yes 52 0.3 No 30 0.5 Yes -30 0.41 No 34 58.42 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr21 30380278 - NM_001320724 RWDD2B 1 0.2 0.19 11 7.38 86.03 18 4.38 No 5 0.07 No 0 0 No -28 0.53 No 53 59.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 95702898 + NM_001278248 RWDD3 1 2.75 0.14 9 1.26 0 30 5.48 No 71 1.63 Yes 28 0.28 Yes -29 0.59 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 184572311 - NM_152682 RWDD4 1 0.09 0.14 7 6.38 88.52 26 6.6 Yes 13 0.63 No 28 0.92 Yes -30 0.7 Yes 45 77.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 184572477 - NM_152682 RWDD4 1 5.57 6.76 72 6.24 0 25 5.57 Yes 12 0.82 Yes 0 0 No -24 0.58 No 46 59.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 184572477 - NM_152682 RWDD4 1 0.28 0.26 13 6.24 0 25 5.57 Yes 12 0.82 Yes 0 0 No -24 0.58 No 46 59.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 184574555 - NM_152682 RWDD4 1 0.19 0.22 14 7.21 87 23 4.78 No 10 0.84 Yes 0 0 No -22 0.62 No 48 58.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 184577128 - NM_152682 RWDD4 1 2.35 1.03 42 1.12 67.53 51 7.31 Yes 21 1.33 Yes 19 0.93 Yes -33 0.35 No 37 72.16 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 137327876 + NM_002957 RXRA 1 0.28 0.46 28 11.66 87.72 37 4.87 No 54 0.45 No 0 0 No -26 0.83 Yes 44 88.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 72488444 - NM_012234 RYBP 1 1.23 0.97 42 11.13 84.56 37 6.1 Yes 24 0.97 Yes 0 0 No -40 0.75 Yes 30 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 133892117 - NM_001005861 RYK 1 0.36 0.26 15 3.01 0 31 5.14 No 11 0.29 No 0 0 No -35 0.89 Yes 35 94.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 133893735 - NM_001005861 RYK 1 0.86 0.63 32 10.71 98.6 22 3.66 No 66 1.04 Yes 0 0 No -21 0.42 No 46 48.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 133899437 - NM_001005861 RYK 1 0.32 0.22 14 5.24 81.7 41 7.29 Yes 28 0.75 No 0 0 No -40 0.81 Yes 30 69.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 133905731 - NM_001005861 RYK 1 0.26 0.19 10 10.66 88.95 15 5.48 No 2 0.84 Yes 0 0 No -25 0.74 Yes 45 73.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 133910819 - NM_001005861 RYK 1 68.25 29.47 72 8.15 80.88 46 6.12 Yes 33 0 No 24 0.72 Yes -33 0.92 Yes 37 94.94 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 133910819 - NM_001005861 RYK 1 0.26 0.1 7 8.15 80.88 46 6.12 Yes 33 0 No 24 0.72 Yes -33 0.92 Yes 37 94.94 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 153516416 - NM_019554 S100A4 1 0.95 1.83 45 9.43 84.46 27 7.75 Yes 60 -0.46 No 26 0.74 Yes -26 0.55 No 44 78.7 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 153507852 - NM_014624 S100A6 1 1.74 2.11 45 1.03 63.23 31 5.83 Yes 35 -1.62 No 30 0.76 Yes -30 0.78 Yes 40 43.44 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 33293596 + NR_135107 S100PBP 1 28.8 25.65 72 2.58 67.39 38 4.21 No 25 1.18 Yes 34 0.74 Yes -43 0.62 No 27 78.39 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 33297934 + NR_135107 S100PBP 1 130.53 3.76 70 6.14 85.45 29 5.39 No 45 0.97 Yes 0 0 No -26 0.56 No 44 69.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 101703234 + NM_001400 S1PR1 1 0.3 0.21 12 7.24 77.18 26 5.29 No -3 1.33 Yes 0 0 No -25 0.91 Yes 45 91.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 18105094 - NM_138421 SAAL1 1 0.26 0.21 14 9.78 89.24 40 5.34 No -1 1.26 Yes 28 0.58 Yes -28 0.69 Yes 42 72.47 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 18105257 - NM_138421 SAAL1 1 0.61 0.56 30 4.52 78.49 29 5.29 No -4 0.66 No 28 0.66 Yes -24 0.59 No 42 55.61 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 18105276 - NM_138421 SAAL1 1 22.16 18.14 72 2.03 74.65 41 9.09 Yes 28 0.58 No 37 0.51 Yes -41 0.44 No 29 59.52 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 18108883 - NM_138421 SAAL1 1 0.15 0.15 9 8.7 89.37 40 6.24 Yes 30 1.47 Yes 0 0 No -30 0.29 No 45 53.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 18110515 - NM_138421 SAAL1 1 0.2 0.26 12 5.04 80.75 49 10.37 Yes 36 1.47 Yes 0 0 No -48 0.59 No 34 61.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 18111813 - NM_138421 SAAL1 1 1.63 1.79 55 8.16 90.82 16 5.63 Yes 3 1 Yes 25 0.81 Yes -34 0.75 Yes 39 73.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 18111864 - NM_138421 SAAL1 1 0.7 0.81 40 2.5 70.78 30 7.38 Yes 17 0.51 No 29 0.82 Yes -29 0.86 Yes 41 80.39 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 18111867 - NM_138421 SAAL1 1 0.09 0.11 7 3.72 80.79 27 7.21 Yes 14 0.53 No 29 0.82 Yes -26 0.9 Yes 44 84.77 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 18115513 - NM_138421 SAAL1 1 1.68 1.26 47 10.72 82.6 32 5.73 Yes 69 1.1 Yes 31 0.9 Yes -31 0.9 Yes 39 92.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64810496 + NM_013299 SAC3D1 1 18.26 7.82 71 6.19 87.11 24 7.4 Yes 11 1.07 Yes 23 0.93 Yes -23 0.92 Yes 47 96.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 45731839 + NM_001319072 SACM1L 1 3.57 3.36 70 8.13 84.36 78 6.57 Yes 15 1.3 Yes 27 0.95 Yes -27 0.95 Yes 43 95.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 45754632 + NM_001319072 SACM1L 1 0.49 0.24 13 2.99 0 25 6.1 Yes 66 0.44 No 24 0.55 Yes -24 0.54 No 42 68.6 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 45755221 + NM_001319072 SACM1L 1 0.16 0.13 9 -2.07 62.59 47 7.83 Yes 34 1.56 Yes 0 0 No -46 0.88 Yes 24 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 45756664 + NM_001319072 SACM1L 1 0.3 0.19 12 4.12 77.72 17 5.83 Yes 4 0.52 No 0 0 No -16 0.5 No 54 77.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 45756701 + NM_001319072 SACM1L 1 0.2 0.15 9 3.21 72.33 19 4.98 No 41 0.53 No 0 0 No -22 0.82 Yes 48 60.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 45776737 + NM_001319072 SACM1L 1 0.88 0.68 33 3.36 0 14 4.47 No 40 0.73 No 26 0.61 Yes -28 0.74 Yes 42 74.44 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 45779076 + NM_001319072 SACM1L 1 0.1 0.13 7 -0.47 81.36 86 9.55 Yes -3 -1.59 No 0 0 No -33 0.65 No 37 78.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 23915826 - NM_001278055 SACS 1 0.19 0.17 10 -4.98 0 28 6.77 Yes 15 0.73 No 0 0 No -30 0.87 Yes 40 85.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 23916802 - NM_001278055 SACS 1 0.42 0.32 15 6.8 89.68 23 5.8 Yes 68 1.58 Yes 0 0 No -22 0.94 Yes 48 93.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 23916861 - NM_001278055 SACS 1 0.14 0.11 7 8.77 82.63 22 6.53 Yes 9 1.63 Yes 0 0 No -21 0.76 Yes 49 84.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 23934518 - NM_001278055 SACS 1 0.35 0.4 21 11.41 87.44 41 7.48 Yes 28 1.19 Yes 0 0 No -40 0.9 Yes 30 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47655252 + NR_027280 SAE1 1 0.22 0.96 42 7.9 85.46 25 7.93 Yes 12 0.93 Yes 0 0 No -24 0.91 Yes 46 93.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47656133 + NR_027280 SAE1 1 0.07 0.29 11 -0.98 62.11 29 4.68 No 42 0.17 No 29 0.71 Yes -24 0.95 Yes 46 94.65 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 47660243 + NR_027280 SAE1 1 0.49 2.1 60 9.3 85.95 32 5.63 Yes 19 0.75 No 0 0 No -31 0.46 No 39 63.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 47661652 + NR_027280 SAE1 1 0.23 0.99 42 6.49 86.7 31 5.83 Yes 18 0.65 No 0 0 No -30 0.95 Yes 40 97.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 47673077 + NR_027280 SAE1 1 1.36 5.67 72 3.7 83.75 28 5.57 Yes 15 0.92 Yes 0 0 No -27 0.75 Yes 43 85.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47679471 + NR_027280 SAE1 1 1.79 6.58 71 8.05 87.73 29 5.74 Yes 50 -1.83 No 0 0 No -29 0.6 No 41 67.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 47683402 + NR_027280 SAE1 1 0.96 3.74 65 7.41 84.34 20 7.36 Yes 65 0.84 Yes 19 0.39 Yes -25 0.48 No 45 61.75 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 47693810 + NR_027280 SAE1 1 0.06 0.22 11 1.7 75.17 20 5.57 Yes 49 1.63 Yes 0 0 No -24 0.57 No 46 57.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 47708318 + NR_027280 SAE1 1 0.41 1.19 46 8 89.44 43 8.51 Yes 58 -3.7 No 0 0 No -35 0.39 No 40 52.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 47708338 + NR_027280 SAE1 1 0.07 0.15 7 6.33 77.07 13 5.39 No 50 -0.57 No 0 0 No -22 0.68 Yes 48 65.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 47708360 + NR_027280 SAE1 1 12.1 32.51 72 8.52 95.6 17 5.55 No 4 0.47 No 0 0 No -25 0.49 No 45 56.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 5630220 + NM_001201338 SAFB 1 0.18 0.32 18 11.32 94.69 19 4.71 No 66 1.27 Yes 0 0 No -27 0.95 Yes 43 95.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 5649000 + NM_001201338 SAFB 1 0.04 0.11 7 -19.7 0 61 8.14 Yes 48 0.84 Yes 0 0 No -36 0.49 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 5661531 + NM_001201338 SAFB 1 161.3 148.6 72 4.09 83.67 16 5.29 No 55 -2.23 No 18 0.21 Yes -21 0.94 Yes 49 93.45 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 5667363 + NM_001201338 SAFB 1 40.71 38.26 72 -1.41 0 10 3.87 No 51 -3.17 No 25 0.63 Yes -26 0.7 Yes 44 58.01 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 5594208 - NM_014649 SAFB2 1 0.24 0.13 9 -10.45 0 9 3.91 No 8 0.1 No 25 0.92 Yes -20 0.66 Yes 50 47.62 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 5595522 - NM_014649 SAFB2 1 0.26 0.43 24 0.49 65.97 51 8.82 Yes 38 0.8 Yes 28 0.67 Yes -50 0.3 No 26 43.68 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 5598892 - NM_014649 SAFB2 1 0.07 0.13 8 -5.07 0 31 5.92 Yes 18 0.45 No 0 0 No -30 0.9 Yes 40 93.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 5616344 - NM_014649 SAFB2 1 0.24 0.29 18 -6.41 77.9 27 6.71 Yes 14 1.57 Yes 0 0 No -26 0.89 Yes 44 91.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14199355 - NM_138352 SAMD1 1 0.57 1.17 46 5.39 81.12 27 6.48 Yes 53 1.92 Yes 0 0 No -26 0.92 Yes 44 83.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 14199808 - NM_138352 SAMD1 1 0.24 0.44 22 -11.46 0 20 4.04 No 57 -4.8 No 27 0.45 Yes -25 0.36 No 58 29.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 39845694 + NM_018028 SAMD4B 1 13.63 3.69 70 3.6 85.02 17 6.08 Yes 4 1.2 Yes 0 0 No -27 0.58 No 43 71.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 39845697 + NM_018028 SAMD4B 1 11.98 3.32 62 2.24 80.12 20 6.32 Yes 7 1.16 Yes 0 0 No -19 0.76 Yes 51 83.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39874347 + NM_018028 SAMD4B 1 6.34 2.83 65 8.42 89.74 41 7.76 Yes 55 1.77 Yes 29 0.86 Yes -29 0.83 Yes 41 80.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 92744188 - NM_017654 SAMD9 1 0.26 0.18 13 5.45 81.47 24 3.76 No -2 0.1 No 0 0 No -23 0.68 Yes 47 75.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 92765301 - NM_001303500 SAMD9L 1 0.93 1.24 54 -4.24 0 33 5.51 No 20 0.72 No 0 0 No -24 0.77 Yes 46 70.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 92766321 - NM_001303500 SAMD9L 1 0.12 0.17 10 4.91 72.79 91 8.63 Yes 42 1.2 Yes 0 0 No -29 0.5 No 41 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 35521840 - NM_015474 SAMHD1 1 0.1 0.19 12 7.48 89.58 30 5.39 No 59 -1.59 No 0 0 No -20 0.44 No 14 48.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 35522333 - NM_015474 SAMHD1 1 0.74 1.46 50 9.79 85.56 28 6.78 Yes 15 1.84 Yes 0 0 No -27 0.87 Yes 43 85.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35545500 - NM_015474 SAMHD1 1 1.97 2.76 58 7.47 75.22 31 6.26 Yes 15 0.32 No 0 0 No -30 0.38 No 40 72.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 35545619 - NM_015474 SAMHD1 1 0.12 0.17 9 8.38 76.78 26 5.66 Yes 13 0.14 No 0 0 No -25 0.8 Yes 45 93.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 35549789 - NM_015474 SAMHD1 1 0.2 0.26 14 3.01 0 38 8.8 Yes 25 0.74 No 0 0 No -33 0.7 Yes 37 68.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 35552179 - NM_015474 SAMHD1 1 0.08 0.1 7 -0.81 0 43 5.82 Yes 62 1.08 Yes 0 0 No -40 0.35 No 37 76.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 35552648 - NM_015474 SAMHD1 1 0.16 0.25 15 11.82 85.7 139 12.99 Yes NA NA NA 0 0 No -58 0.3 No 11 20.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 35557457 - NM_015474 SAMHD1 1 0.1 0.17 12 12.85 95.65 24 6.09 Yes 11 1.66 Yes 0 0 No -23 0.95 Yes 47 95.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35563807 - NM_015474 SAMHD1 1 0.14 0.33 19 5.84 76.53 46 5.94 Yes 14 0.19 No 26 0.81 Yes -26 0.82 Yes 44 76.52 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 44358949 + NM_015380 SAMM50 1 0.06 0.1 7 4.35 78.07 24 5.19 No 11 0.44 No 0 0 No -23 0.85 Yes 47 87.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 44371886 + NM_015380 SAMM50 1 0.1 0.21 12 -1.7 63.35 33 5.49 No 20 0.87 Yes 0 0 No -25 0.76 Yes 35 58.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 44384776 + NM_015380 SAMM50 1 0.24 0.56 30 7.39 84.9 50 7.06 Yes 71 0.73 No 0 0 No -29 0.79 Yes 41 80.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 44384993 + NM_015380 SAMM50 1 0.08 0.15 10 -6.21 76.68 49 8.28 Yes 36 1.47 Yes 0 0 No -48 0.82 Yes 22 93.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 15868284 - NM_001286523 SAMSN1 1 0.48 0.64 28 7.24 78.24 26 6.86 Yes 13 1.25 Yes 0 0 No -25 0.87 Yes 45 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 15868694 - NM_001286523 SAMSN1 1 0.14 0.21 11 7.64 80.59 23 5.39 No 40 0.62 No 0 0 No -22 0.42 No 48 35.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 15889094 - NM_001286523 SAMSN1 1 0.39 0.68 34 8.65 88.33 23 4.12 No 69 1.02 Yes 0 0 No -22 0.9 Yes 48 92.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128700560 - NM_001145928 SAP130 1 0.3 0.18 10 9.77 87.01 57 7.31 Yes 44 1.66 Yes 0 0 No -25 0.68 Yes 45 75.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128707980 - NM_001145928 SAP130 1 1.43 1.15 46 2.49 74.44 35 6.24 Yes 75 0.54 No 0 0 No -34 0.95 Yes 36 97.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128708019 - NM_001145928 SAP130 1 0.14 0.11 7 -3.95 77.19 22 5.66 Yes 36 0.53 No 31 0.91 Yes -21 0.69 Yes 49 67.2 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 128744534 - NM_001145928 SAP130 1 4.96 2.85 61 5.5 82.01 95 9.52 Yes 68 1.15 Yes 31 0.76 Yes -34 0.91 Yes 36 90.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 128758026 - NM_001145928 SAP130 1 11.42 6.58 72 6.73 85.9 43 7.8 Yes 30 1.38 Yes 0 0 No -27 0.86 Yes 43 88.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128774047 - NM_001145928 SAP130 1 1.45 0.65 31 7.67 77.56 14 7.59 Yes 1 0.58 No 28 0.82 Yes -28 0.67 Yes 42 90.21 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 21719230 + NM_005870 SAP18 1 0.21 1.97 59 3.01 0 32 6.76 Yes 19 1.88 Yes 0 0 No -31 0.84 Yes 39 89.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21719300 + NM_005870 SAP18 1 0.13 1.19 47 6.56 88.68 22 6.85 Yes 9 1.12 Yes 0 0 No -21 0.97 Yes 49 94.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21721044 + NM_005870 SAP18 1 0.09 0.9 38 9.85 85.11 28 6.56 Yes 15 1.43 Yes 0 0 No -27 0.87 Yes 43 91.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 174298359 + NM_003864 SAP30 1 1.33 2.63 64 2.6 0 24 5.3 No 27 1.04 Yes 0 0 No -32 0.61 No 38 56.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73695838 + NM_001301839 SAP30BP 1 0.09 0.17 8 6.97 82.07 63 7.48 Yes 2 1.47 Yes 28 0.42 Yes -47 0.88 Yes 23 95.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73696816 + NM_001301839 SAP30BP 1 0.1 0.17 10 6.53 80.06 35 7.11 Yes NA NA NA 0 0 No -34 0.68 Yes 36 75.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73699026 + NM_001301839 SAP30BP 1 0.06 0.13 7 5.29 86.08 23 4.06 No 2 0.86 Yes 22 0.92 Yes -22 0.85 Yes 48 73.47 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73699614 + NM_001301839 SAP30BP 1 0.05 0.11 7 6.55 70.53 23 5.39 No 38 0.46 No 0 0 No -22 0.7 Yes 48 64.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 73701690 + NM_001301839 SAP30BP 1 1.22 2.32 62 6.34 82.15 54 6.14 Yes 41 1.24 Yes 42 0.46 Yes -42 0.56 No 28 70.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 153832976 + NR_024084 SAP30L 1 6.04 0.39 20 4.64 84.09 12 4.9 No 27 1.09 Yes 24 0.81 Yes -39 0.31 No 31 80.12 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 153832976 + NR_024084 SAP30L 1 2.62 0.1 7 4.64 84.09 12 4.9 No 27 1.09 Yes 24 0.81 Yes -39 0.31 No 31 80.12 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 71914881 - NM_020150 SAR1A 1 0.09 0.33 17 8.96 84.39 25 5.41 No 12 0.92 Yes 24 0.9 Yes -24 0.48 No 46 71.64 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 71920820 - NM_020150 SAR1A 1 0.03 0.1 7 -3.48 0 16 3.84 No 29 0.74 No 0 0 No -41 0.9 Yes 29 91.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 71921459 - NM_020150 SAR1A 1 0.06 0.13 8 5.56 81.22 28 5.83 Yes 44 1.03 Yes 28 0.5 Yes -30 0.42 No 14 65.39 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 71921459 - NM_020150 SAR1A 1 0.09 0.24 14 5.56 81.22 28 5.83 Yes 44 1.03 Yes 28 0.5 Yes -30 0.42 No 14 65.39 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 71921684 - NM_020150 SAR1A 1 0.56 0.78 35 -2.7 0 33 6.63 Yes 20 1.62 Yes 28 0.92 Yes -32 0.87 Yes 38 95.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 71922516 - NM_020150 SAR1A 1 3.75 5.26 69 3.67 84.38 20 6.07 Yes 7 1.26 Yes 19 0.64 Yes -19 0.81 Yes 51 81.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 71922574 - NM_020150 SAR1A 1 0.35 0.49 22 0.55 55.1 18 5.05 No 71 -5.45 No 0 0 No -23 0.58 No 53 29.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 71926150 - NM_020150 SAR1A 1 0.1 0.15 10 8.03 83.6 52 7.65 Yes 75 1.26 Yes 0 0 No -31 0.55 No 39 60.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 71926579 - NM_020150 SAR1A 1 0.11 0.15 11 10.07 88.27 30 6.15 Yes 21 1.8 Yes 29 0.92 Yes -29 0.53 No 41 69.5 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 133947244 - NM_001033503 SAR1B 1 0.46 1.15 50 5.46 87.11 49 8.78 Yes 36 1.05 Yes 0 0 No -23 0.83 Yes 47 78.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 133948997 - NM_001033503 SAR1B 1 0.19 0.47 20 8.33 92.19 27 5.37 No 14 0.57 No 0 0 No -26 0.91 Yes 44 90.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 133949829 - NM_001033503 SAR1B 1 0.05 0.1 7 8.13 86.46 39 7.14 Yes 26 0.41 No 0 0 No -43 0.34 No 27 27.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 133957156 - NM_001033503 SAR1B 1 0.08 0.11 7 1.83 0 35 3.32 No 43 0.23 No 0 0 No -42 0.34 No 40 42.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 133967865 - NM_001033503 SAR1B 1 2.81 0.38 20 6.32 90.14 28 5.29 No 54 1.31 Yes 0 0 No -27 0.38 No 16 53.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 133967890 - NM_001033503 SAR1B 1 1.34 0.17 10 0.51 77.85 42 7.84 Yes 29 1.31 Yes 29 0.79 Yes -29 0.71 Yes 41 72.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 29924392 - NM_001284239 SARAF 1 0.06 0.24 14 4.09 82.19 18 6.47 Yes 49 0.56 No 0 0 No -18 0.39 No 42 63.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 29924427 - NM_001284239 SARAF 1 0.26 0.9 39 -1.71 0 17 3.85 No 14 0.56 No 0 0 No -32 0.57 No 38 74.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 29931568 - NM_001284239 SARAF 1 15.45 3.96 71 2.67 0 38 6.76 Yes 36 2.1 Yes 33 0.9 Yes -37 0.95 Yes 33 98.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 29931572 - NM_001284239 SARAF 1 735 188.68 72 10.71 90.14 34 6.58 Yes 32 2.11 Yes 33 0.9 Yes -33 0.95 Yes 37 98.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 26700230 + NM_015077 SARM1 1 5.2 0.29 17 5.22 72.35 38 6.15 Yes -1 0.32 No 0 0 No -31 0.61 No 39 51.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 26715141 + NM_015077 SARM1 1 1.78 0.33 19 0.78 71.75 14 5.17 No 41 -2.91 No 23 0.7 Yes -21 0.74 Yes 49 36.33 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 26715378 + NM_015077 SARM1 1 2.05 0.29 18 2.63 0 19 4.36 No 17 1.54 Yes 19 0.96 Yes -18 0.9 Yes 52 60.89 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 56160828 - NM_033082 SARNP 1 0.43 1.94 55 14.3 98.13 24 6.08 Yes 11 0.62 No 0 0 No -23 0.83 Yes 47 75.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56173161 - NM_033082 SARNP 1 0.03 0.11 7 9.29 89.75 27 6.37 Yes 14 0.68 No 0 0 No -26 0.63 No 44 63.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56188656 - NM_033082 SARNP 1 0.03 0.11 7 -10.64 0 16 3.86 No 57 2.03 Yes 0 0 No -44 0.88 Yes 26 93.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56188663 - NM_033082 SARNP 1 0.12 0.49 25 0.45 83.17 38 9.03 Yes 50 2.05 Yes 0 0 No -37 0.92 Yes 33 93.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56189856 - NM_033082 SARNP 1 0.23 1.03 42 2.61 0 33 5.97 Yes 20 0.27 No 0 0 No -32 0.91 Yes 38 97.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56193968 - NM_033082 SARNP 1 0.03 0.11 8 4.52 0 22 7.3 Yes 9 1.47 Yes 0 0 No -21 0.34 No 39 37.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56197329 - NM_033082 SARNP 1 0.04 0.14 10 13.27 100 26 5.39 No 13 0.9 Yes 0 0 No -25 0.89 Yes 45 81.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56209724 - NM_033082 SARNP 1 0.86 2.53 61 9.72 85.29 30 5.69 Yes 46 0.85 Yes 29 0.71 Yes -32 0.63 No 41 65.6 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 56210954 - NM_033082 SARNP 1 0.44 1.26 48 12.72 83.19 29 5.91 Yes 16 0.45 No 0 0 No -28 0.93 Yes 42 96.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 109756814 + NM_001330669 SARS 1 0.03 0.11 7 7.13 80 27 7.1 Yes 14 1.54 Yes 0 0 No -26 0.68 Yes 44 83.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109757117 + NM_001330669 SARS 1 0.04 0.13 9 5.96 82.87 25 7.68 Yes 12 1.63 Yes 0 0 No -24 0.93 Yes 46 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109757168 + NM_001330669 SARS 1 6.72 23.9 72 9.02 88.18 32 5.49 No 63 1.9 Yes 26 0.61 Yes -24 0.64 No 46 78.18 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 109763704 + NM_001330669 SARS 1 0.06 0.19 11 0.32 83.92 39 7.07 Yes 26 1.75 Yes 0 0 No -38 0.83 Yes 32 94.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109763708 + NM_001330669 SARS 1 0.52 2.01 54 2.44 0 43 7.35 Yes 30 1.74 Yes 0 0 No -42 0.83 Yes 28 94.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109766578 + NM_001330669 SARS 1 0.08 0.28 14 4.13 81.69 25 6.16 Yes 51 -3.41 No 23 0.47 Yes -25 0.48 No 45 56.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 109766603 + NM_001330669 SARS 1 0.54 1.93 60 1.06 0 13 5.83 Yes 76 -3.39 No 0 0 No -27 0.76 Yes 43 76.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 109770974 + NM_001330669 SARS 1 0.05 0.24 13 -11.92 0 32 6.57 Yes 67 -2.86 No 0 0 No -31 0.92 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 109770975 + NM_001330669 SARS 1 0.03 0.11 8 -10.15 0 33 6.63 Yes 68 -2.86 No 0 0 No -32 0.92 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 109774354 + NM_001330669 SARS 1 0.05 0.14 8 -3.83 0 24 7.2 Yes 60 0.75 No 0 0 No -33 0.63 No 37 86.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 109778996 + NM_001330669 SARS 1 0.05 0.22 14 8.65 77.63 30 6.33 Yes 32 0.84 Yes 27 0.49 Yes -29 0.74 Yes 41 47.84 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 109780325 + NM_001330669 SARS 1 0.15 0.71 34 -4.78 0 16 4.23 No 3 0.22 No 24 0.85 Yes -15 0.85 Yes 55 64.86 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 39406357 - NM_001145901 SARS2 1 0.51 0.21 11 6.58 80.41 26 5.66 Yes 13 1.02 Yes 0 0 No -25 0.93 Yes 45 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39409167 - NM_001145901 SARS2 1 1.86 1.04 41 -0.16 0 33 7.54 Yes 20 1.17 Yes 0 0 No -32 0.88 Yes 38 89.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65731476 + NM_005146 SART1 1 0.47 0.43 21 10.37 91.76 17 4.2 No 4 1.02 Yes 26 0.85 Yes -26 0.53 No 41 54.45 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 65732521 + NM_005146 SART1 1 0.65 0.74 34 8.17 81.22 26 5.66 Yes 51 2.23 Yes 25 0.92 Yes -25 0.72 Yes 45 82.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 65743849 + NM_005146 SART1 1 0.58 0.5 29 8.12 77.54 30 5.57 Yes 41 -2.62 No 20 0.46 Yes -29 0.49 No 41 64.32 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 65746015 + NM_005146 SART1 1 0.15 0.36 23 5.84 81.48 38 5.89 Yes 25 0.05 No 0 0 No -34 0.47 No 33 42.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 108917427 - NM_014706 SART3 1 0.19 0.28 15 -3.14 0 16 4.35 No 74 -2.38 No 21 0.86 Yes -15 0.6 No 55 26.78 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 108919577 - NM_014706 SART3 1 0.41 0.89 39 8.67 87.81 45 4.4 No 65 1.23 Yes 0 0 No -24 0.54 No 46 59.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 108920326 - NM_014706 SART3 1 0.14 0.24 13 -6.46 0 45 5.51 No 25 0.94 Yes 0 0 No -37 0.84 Yes 33 76.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 108925049 - NM_014706 SART3 1 0.1 0.13 9 0.49 0 13 4.24 No 23 0.48 No 0 0 No -35 0.74 Yes 35 81.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 108936628 - NM_014706 SART3 1 1.8 3.85 70 5.52 81.92 36 5.27 No 73 -5.29 No 24 0.68 Yes -35 0.42 No 35 33.33 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 108936971 - NM_014706 SART3 1 0.11 0.28 15 1.84 64.37 23 4.63 No 10 0.65 No 26 0.75 Yes -30 0.8 Yes 40 90.94 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 108938309 - NM_014706 SART3 1 12.1 25.5 72 7.07 81.84 15 6.25 Yes 2 1.28 Yes 25 0.79 Yes -25 0.69 Yes 45 82.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 128918307 + NM_018990 SASH3 1 0.05 0.22 12 8.36 87.16 33 7.3 Yes 5 0.45 No 0 0 No -22 0.45 No 38 54.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 128919192 + NM_018990 SASH3 1 0.08 0.32 18 4 85.09 30 5.83 Yes 29 -1.54 No 0 0 No -29 0.7 Yes 41 74.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 128921652 + NM_018990 SASH3 1 0.09 0.38 19 6.86 94.23 20 4.69 No 11 1.51 Yes 0 0 No -19 0.67 Yes 51 74.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 128922440 + NM_018990 SASH3 1 0.13 0.28 16 4.22 81.89 22 4.87 No 9 0.46 No 0 0 No -21 0.9 Yes 49 78.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 128926307 + NM_018990 SASH3 1 0.05 0.21 14 0.36 0 33 6.24 Yes 20 0.7 No 0 0 No -32 0.79 Yes 38 87.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100549786 - NM_194292 SASS6 1 0.7 0.35 19 6.57 83.75 49 5.11 No 36 0.44 No 0 0 No -34 0.46 No 36 48.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100563956 - NM_194292 SASS6 1 1.58 0.61 29 10.71 86.79 30 7.63 Yes 33 1.21 Yes 0 0 No -29 0.77 Yes 41 81.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100573092 - NM_194292 SASS6 1 0.76 0.44 23 -6.35 59.15 23 4.99 No 10 -2.48 No 0 0 No -22 0.39 No 33 37.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100585398 - NM_194292 SASS6 1 0.25 0.17 9 6.79 87.22 21 5.71 Yes 0 0.35 No 0 0 No -20 0.71 Yes 50 75.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100589534 - NM_194292 SASS6 1 1.53 0.79 35 8.64 89.9 22 6.92 Yes 9 1.67 Yes 0 0 No -21 0.45 No 49 64.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 100591326 - NM_194292 SASS6 1 1.22 0.67 32 8.9 88.67 39 7.25 Yes 26 0.97 Yes 0 0 No -24 0.66 No 46 60.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 100592321 - NM_194292 SASS6 1 3.14 1.38 53 2.41 0 37 6.36 Yes 42 1.09 Yes 0 0 No -36 0.75 Yes 34 82.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100592325 - NM_194292 SASS6 1 3.14 1.44 47 -0.04 83.57 33 6.06 Yes 38 1.1 Yes 0 0 No -32 0.74 Yes 38 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 23801760 + NR_027783 SAT1 1 0.04 0.11 7 3.31 0 30 6.48 Yes 17 1.21 Yes 43 0.75 Yes -29 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 51116108 - NM_021818 SAV1 1 0.23 0.17 9 8.9 83.54 28 5.31 No 74 1.34 Yes 0 0 No -32 0.42 No 49 46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 51134219 - NM_021818 SAV1 1 2.58 1.93 61 9.49 86.03 31 5.48 No -2 0.01 No 25 0.71 Yes -25 0.49 No 45 51.72 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 66459265 - NM_016038 SBDS 1 0.11 0.11 8 -0.34 0 29 5.48 No 16 0.93 Yes 0 0 No -28 0.93 Yes 42 87.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66459270 - NM_016038 SBDS 1 0.44 0.46 25 6.21 75.05 24 5.08 No 11 0.93 Yes 0 0 No -23 0.92 Yes 47 88.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72301330 + NR_024110 SBDSP1 1 12.09 0.93 40 6.05 72.37 24 3.75 No 11 0.95 Yes 0 0 No -23 0.92 Yes 47 89.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72301335 + NR_024110 SBDSP1 1 3.35 0.31 15 0.89 0 29 4.06 No 16 0.94 Yes 0 0 No -28 0.92 Yes 42 87.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72302606 + NR_024110 SBDSP1 1 0.16 0.1 7 2.68 0 39 7.83 Yes 26 1.35 Yes 0 0 No -38 0.62 No 32 64.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50885631 - NM_002972 SBF1 1 0.07 0.13 8 7.9 86.57 18 6.37 Yes 43 1.89 Yes 0 0 No -31 0.66 No 39 31.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50885852 - NM_002972 SBF1 1 0.08 0.14 8 3.39 70.98 19 5.97 Yes 38 1.81 Yes 0 0 No -50 0.5 No 20 53.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50886805 - NM_002972 SBF1 1 0.12 0.24 16 7.9 86.02 61 6.81 Yes NA NA NA 0 0 No -29 0.56 No 41 65.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50886863 - NM_002972 SBF1 1 0.33 0.6 27 -1.95 0 14 4.47 No 26 2.1 Yes 0 0 No -38 0.87 Yes 32 91.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50893136 - NM_002972 SBF1 1 0.08 0.17 8 3.11 75.44 18 5.15 No 44 0.43 No 23 0.77 Yes -21 0.78 Yes 62 35.16 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 50893155 - NM_002972 SBF1 1 0.32 0.65 32 5.39 77.52 20 4.81 No 25 0.44 No 23 0.77 Yes -19 0.69 Yes 51 27.85 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 50893198 - NM_002972 SBF1 1 0.14 0.31 17 5.47 80.01 14 5.38 No 59 -2.94 No 20 0.91 Yes -42 0.46 No 28 65.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 50893560 - NM_002972 SBF1 1 0.36 0.57 26 2.16 0 9 4.58 No 38 1.93 Yes 0 0 No -43 0.45 No 41 37.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50897840 - NM_002972 SBF1 1 1.41 1.4 48 9.06 79.78 18 8.25 Yes 5 1.77 Yes 20 0.83 Yes -26 0.51 No 53 68.78 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 50899115 - NM_002972 SBF1 1 0.32 0.43 24 -13.2 70.89 34 5.94 Yes 37 0.66 No 0 0 No -33 0.61 No 37 36.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50900288 - NM_002972 SBF1 1 0.1 0.17 12 1.15 0 14 4.47 No 55 0.93 Yes 0 0 No -29 0.76 Yes 41 64.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 50901112 - NM_002972 SBF1 1 0.46 0.53 26 0.68 0 18 4.47 No 46 2.07 Yes 0 0 No -17 0.89 Yes 53 72.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50901144 - NM_002972 SBF1 1 0.24 0.29 15 -1.53 62.56 27 6.16 Yes 14 2.12 Yes 0 0 No -26 0.66 Yes 44 77.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50902462 - NM_002972 SBF1 1 0.23 0.44 19 4.12 69.49 43 7.27 Yes 24 0.28 No 0 0 No -42 0.79 Yes 28 93.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50902462 - NM_002972 SBF1 1 0.13 0.28 13 4.12 69.49 43 7.27 Yes 24 0.28 No 0 0 No -42 0.79 Yes 28 93.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50903555 - NM_002972 SBF1 1 0.24 0.32 19 2.69 0 32 5.81 Yes 19 0.75 No 0 0 No -27 0.65 No 43 62.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50903770 - NM_002972 SBF1 1 1.06 1.1 46 4.68 75.33 13 5.66 Yes 0 1.72 Yes 24 0.88 Yes -22 0.77 Yes 58 68.98 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr22 50904428 - NM_002972 SBF1 1 0.12 0.15 10 3.79 81.72 28 5.83 Yes 15 0.55 No 0 0 No -27 0.84 Yes 43 86.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50904473 - NM_002972 SBF1 1 0.09 0.13 7 -13.86 69.19 23 6.28 Yes 43 2.14 Yes 0 0 No -22 0.75 Yes 15 62.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 50904785 - NM_002972 SBF1 1 0.32 0.49 25 9.64 89.47 15 6.07 Yes NA NA NA 0 0 No -18 0.62 No 52 87.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 50904943 - NM_002972 SBF1 1 0.13 0.19 12 0.95 64.11 24 6.04 Yes 76 0.53 No 21 0.66 Yes -23 0.54 No 47 92.91 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr22 50905873 - NM_002972 SBF1 1 1.29 1.74 58 -2.56 0 58 6.7 Yes 73 -1.9 No 0 0 No -45 0.37 No 39 62.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50906041 - NM_002972 SBF1 1 0.77 1.28 45 8.82 82.76 16 5.29 No 18 -0.92 No 0 0 No -19 0.35 No 51 50.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50906123 - NM_002972 SBF1 1 20.55 33.11 72 5.51 77.27 35 8.04 Yes -4 1.62 Yes 30 0.46 Yes -34 0.62 No 36 87.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 10038327 - NM_030962 SBF2 1 12.31 1.14 36 1.94 72.34 20 4.1 No 39 -3.96 No 0 0 No -19 0.65 No 51 46.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 10041832 - NM_030962 SBF2 1 8.42 0.56 25 6.55 81.25 31 5.66 Yes 18 1.12 Yes 0 0 No -30 0.94 Yes 40 96.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 10049432 - NM_030962 SBF2 1 5.73 0.47 23 9.1 78.82 22 4.94 No 60 0.55 No 0 0 No -24 0.37 No 42 59.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 123792306 - NM_018183 SBNO1 1 0.75 1.17 49 9.79 87.72 24 7.35 Yes 11 1.34 Yes 0 0 No -23 0.92 Yes 47 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123808377 - NM_018183 SBNO1 1 0.09 0.15 11 -2.27 78.46 27 4.59 No 14 1.18 Yes 0 0 No -26 0.51 No 44 51.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 123815874 - NM_018183 SBNO1 1 0.28 0.36 19 6.83 80.09 28 5.48 No 57 0.81 Yes 0 0 No -27 0.82 Yes 43 87.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123821036 - NM_018183 SBNO1 1 2.63 4.25 71 3.1 72.72 27 9 Yes 14 0.68 No 0 0 No -26 0.95 Yes 44 95.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123827383 - NM_018183 SBNO1 1 0.08 0.13 9 4.99 84.29 25 5.1 No 25 1.43 Yes 0 0 No -24 0.86 Yes 46 90.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123830011 - NM_018183 SBNO1 1 0.14 0.13 8 4.71 70.2 75 8.79 Yes 62 0.74 No 0 0 No -25 0.42 No 41 31.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 123830112 - NM_018183 SBNO1 1 0.18 0.17 8 -1.98 0 13 3.86 No 33 0.34 No 0 0 No -34 0.91 Yes 36 92.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123830118 - NM_018183 SBNO1 1 86.01 75.11 72 7.52 84.18 29 5.92 Yes 27 0.34 No 28 0.84 Yes -28 0.91 Yes 42 93.28 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 123830118 - NM_018183 SBNO1 1 4.67 4.07 72 7.52 84.18 29 5.92 Yes 27 0.34 No 28 0.84 Yes -28 0.91 Yes 42 93.28 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 123830118 - NM_018183 SBNO1 1 0.4 0.38 18 7.52 84.18 29 5.92 Yes 27 0.34 No 28 0.84 Yes -28 0.91 Yes 42 93.28 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 123832677 - NM_018183 SBNO1 1 0.15 0.19 13 2.92 0 23 7.64 Yes 10 1.63 Yes 0 0 No -22 0.59 No 22 53.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 123840323 - NM_018183 SBNO1 1 0.31 0.18 11 7.79 92.91 45 6.34 Yes 32 0.28 No 0 0 No -36 0.6 No 34 68.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 123842400 - NM_018183 SBNO1 1 12.4 6.97 72 10.98 96.53 19 6.06 Yes 6 0.38 No 0 0 No -31 0.42 No 39 78.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 123846275 - NM_018183 SBNO1 1 4.12 2.29 63 10.01 88.27 39 4.15 No 70 0.75 No 0 0 No -31 0.52 No 39 69.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1109593 - NM_014963 SBNO2 1 0.79 0.43 24 -2.03 0 33 6.62 Yes 51 1.76 Yes 0 0 No -32 0.83 Yes 38 43.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1115713 - NM_014963 SBNO2 1 0.25 0.11 8 13.01 92.54 31 5.74 Yes 18 1.33 Yes 0 0 No -30 0.8 Yes 40 78.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1117469 - NM_014963 SBNO2 1 0.24 0.18 11 5.31 81.84 16 5.48 No 3 0.37 No 23 0.36 Yes -23 0.55 No 47 53.26 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 1118310 - NM_014963 SBNO2 1 0.18 0.15 8 6.93 90.92 29 5.92 Yes 64 0.51 No 0 0 No -28 0.78 Yes 18 67.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1122768 - NM_014963 SBNO2 1 0.44 0.24 14 3.67 81.22 22 4.79 No 32 2.34 Yes 0 0 No -19 0.58 No 51 40.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1123633 - NM_014963 SBNO2 1 0.78 0.54 27 -8.33 0 16 3.76 No 33 -2.05 No 0 0 No -26 0.67 Yes 44 43.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1143924 - NM_014963 SBNO2 1 0.64 0.38 20 9.01 83.85 25 5.24 No -4 0.69 No 0 0 No -24 0.42 No 48 55.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1147387 - NM_014963 SBNO2 1 0.24 0.13 9 8.17 84.54 27 5.18 No 48 1.91 Yes 0 0 No -26 0.86 Yes 47 59.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 50148547 + NM_021228 SCAF1 1 0.1 0.13 8 5.99 80.12 27 5.74 Yes 35 -1.4 No 0 0 No -26 0.74 Yes 44 74.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 50149313 + NM_021228 SCAF1 1 0.16 0.19 12 2.03 70.08 28 5.73 Yes 27 -1.08 No 0 0 No -26 0.46 No 40 55.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50149750 + NM_021228 SCAF1 1 1.13 1.46 46 3.55 81.28 18 3.79 No 72 0.6 No 23 0.73 Yes -19 0.43 No 60 51.6 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 50149761 + NM_021228 SCAF1 1 0.13 0.14 9 -4.58 0 17 4.47 No 65 -5.49 No 23 0.73 Yes -16 0.79 Yes 54 45.18 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 50149805 + NM_021228 SCAF1 1 1.11 1.35 47 -1.12 63.45 26 5.65 Yes 48 0.25 No 0 0 No -44 0.7 Yes 26 37.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 50149816 + NM_021228 SCAF1 1 0.22 0.26 16 2.6 0 20 4.47 No 59 0.25 No 0 0 No -15 0.58 No 55 44.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50149974 + NM_021228 SCAF1 1 0.91 1 40 -1.05 63.13 26 5.73 Yes 13 1.79 Yes 0 0 No -25 0.93 Yes 45 90.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50161384 + NM_021228 SCAF1 1 0.27 0.35 21 2.93 81.13 13 4.89 No 13 -0.77 No 0 0 No -25 0.71 Yes 45 50.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 46313093 - NM_004719 SCAF11 1 6.82 9.15 72 5.22 70.59 44 8.65 Yes 10 1.28 Yes 22 0.88 Yes -40 0.45 No 33 67.84 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 46315920 - NM_004719 SCAF11 1 0.19 0.25 15 -0.55 63.35 22 5.2 No 69 0.43 No 0 0 No -21 0.51 No 48 41.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46318876 - NM_004719 SCAF11 1 0.04 0.1 7 2.74 80.26 20 4.89 No 46 1.35 Yes 23 0.95 Yes -22 0.44 No 48 45.2 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 46327011 - NM_004719 SCAF11 1 0.3 0.86 43 0.4 0 32 5.18 No 53 1.08 Yes 0 0 No -31 0.8 Yes 39 76.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 46328063 - NM_004719 SCAF11 1 0.05 0.13 7 2.4 0 9 3.87 No 14 2.01 Yes 0 0 No -26 0.69 Yes 44 88.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 46339094 - NM_004719 SCAF11 1 0.28 0.75 35 -2.21 65.23 49 7.26 Yes 36 1.17 Yes 0 0 No -34 0.69 Yes 36 64.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 46345472 - NM_004719 SCAF11 1 0.06 0.14 9 5.96 82.87 18 6.67 Yes 39 0.87 Yes 0 0 No -28 0.79 Yes 42 85.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 46347641 - NM_004719 SCAF11 1 1.57 3.53 64 8.31 84.08 31 5.56 Yes 66 1.04 Yes 0 0 No -24 0.81 Yes 46 85.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 46349974 - NM_004719 SCAF11 1 0.05 0.11 7 -0.04 80.62 26 6.69 Yes 13 1.33 Yes 0 0 No -25 0.62 No 45 73.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 46349976 - NM_004719 SCAF11 1 0.64 1.42 55 7.12 77.39 24 6.54 Yes 11 1.35 Yes 24 0.87 Yes -23 0.61 No 47 74.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 46353998 - NM_004719 SCAF11 1 0.98 2.15 60 6.28 76.56 32 6.51 Yes 19 0.67 No 0 0 No -31 0.62 No 39 80.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 46355106 - NM_004719 SCAF11 1 6.63 14.79 71 10.93 97.96 40 7.2 Yes 24 1.74 Yes 39 0.67 Yes -39 0.47 No 34 55.26 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 46369518 - NM_004719 SCAF11 1 3.54 5.24 68 9.96 86.29 56 7.67 Yes 43 2.35 Yes 40 0.55 Yes -40 0.59 No 15 67.94 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 46378116 - NM_004719 SCAF11 1 0.08 0.13 9 4.89 80.87 30 5.47 No 65 -5.07 No 0 0 No -29 0.9 Yes 41 93.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 33057488 - NM_020706 SCAF4 1 74.21 54.22 72 4.22 79.98 27 6.24 Yes 73 0.35 No 26 0.92 Yes -26 0.9 Yes 44 91.54 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr21 33066756 - NM_020706 SCAF4 1 0.09 0.13 8 9.22 91.96 34 6.16 Yes 38 0.64 No 0 0 No -31 0.3 No 39 45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 33069061 - NM_020706 SCAF4 1 4.01 4.89 70 -2.22 67.09 19 6.34 Yes 72 0.85 Yes 29 0.48 Yes -31 0.31 No 32 27.71 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 33073476 - NM_020706 SCAF4 1 0.37 0.6 32 -0.86 0 12 4.05 No 23 0.82 Yes 0 0 No -31 0.91 Yes 39 84.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33073479 - NM_020706 SCAF4 1 1.47 2.36 68 -0.74 0 9 3.36 No 20 0.82 Yes 0 0 No -28 0.9 Yes 42 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 155063089 + NM_014892 SCAF8 1 6.11 5.08 72 10.29 89.59 29 5.65 Yes 16 1.13 Yes 28 0.86 Yes -28 0.94 Yes 42 93.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 155113634 + NM_014892 SCAF8 1 0.93 1.19 47 4 79.63 25 4.95 No -4 0.31 No 0 0 No -24 0.83 Yes 46 85.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 155115485 + NM_014892 SCAF8 1 0.05 0.1 7 0.04 62.87 27 4.92 No 28 0.93 Yes 0 0 No -26 0.75 Yes 44 53.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 155123131 + NM_014892 SCAF8 1 0.06 0.1 7 4.57 76.74 16 5.97 Yes 37 0.75 No 0 0 No -23 0.56 No 21 40.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 155124680 + NM_014892 SCAF8 1 0.19 0.14 7 2.54 73.26 33 7.02 Yes 47 1.27 Yes 0 0 No -32 0.87 Yes 38 86.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 155124680 + NM_014892 SCAF8 1 9.28 7.15 72 2.54 73.26 33 7.02 Yes 47 1.27 Yes 0 0 No -32 0.87 Yes 38 86.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 155143411 + NM_014892 SCAF8 1 0.08 0.13 7 -11 81.36 24 5.33 No 5 0 No 0 0 No -23 0.72 Yes 47 73.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127734042 - NM_173690 SCAI 1 1.92 0.42 23 2.61 67.47 33 7.69 Yes 20 1.65 Yes 32 0.86 Yes -32 0.93 Yes 38 94.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 127736556 - NM_173690 SCAI 1 0.64 0.15 9 9.5 92.63 24 5.92 Yes 11 1.21 Yes 23 0.91 Yes -23 0.87 Yes 47 94.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 127737669 - NM_173690 SCAI 1 4.8 0.97 43 3.64 61.17 32 5.6 Yes 42 1.18 Yes 31 0.91 Yes -31 0.67 Yes 39 80.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 127757073 - NM_173690 SCAI 1 14.96 2.63 66 4.84 88.13 21 5.2 No 62 1.28 Yes 0 0 No -20 0.74 Yes 46 76.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127763248 - NM_173690 SCAI 1 0.96 0.14 8 4.95 78.12 22 7.3 Yes 9 1.96 Yes 0 0 No -21 0.34 No 49 50.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 127814875 - NM_173690 SCAI 1 45.99 9.46 72 9.67 91.39 23 5.09 No 57 0.34 No 0 0 No -27 0.64 No 43 55.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 127816807 - NM_173690 SCAI 1 2.07 0.4 19 13.08 96.89 31 6.08 Yes 72 0.44 No 0 0 No -30 0.95 Yes 40 97.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 127881634 - NM_173690 SCAI 1 2.17 0.15 10 7.04 75.67 24 5.92 Yes 11 0.97 Yes 0 0 No -23 0.66 Yes 47 78.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 127903131 - NM_173690 SCAI 1 1.61 0.1 7 4.19 0 27 6.08 Yes 65 1.37 Yes 0 0 No -30 0.5 No 45 45.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 77666443 + NM_004866 SCAMP1 1 0.93 0.44 19 12.57 92.08 29 5.92 Yes 45 1.32 Yes 28 0.76 Yes -28 0.62 No 42 84.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 77763267 + NM_004866 SCAMP1 1 0.4 0.22 11 12.03 95.48 32 5.66 Yes 19 1.2 Yes 0 0 No -31 0.6 No 43 74.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 75139265 - NM_005697 SCAMP2 1 0.2 0.53 28 7.4 88.96 19 5 No 49 -3.88 No 0 0 No -21 0.59 No 49 66.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 75140987 - NM_005697 SCAMP2 1 0.2 0.71 35 7.56 84.58 41 6.86 Yes 68 1.4 Yes 40 0.53 Yes -40 0.94 Yes 30 92.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 75140987 - NM_005697 SCAMP2 1 0.04 0.15 11 7.56 84.58 41 6.86 Yes 68 1.4 Yes 40 0.53 Yes -40 0.94 Yes 30 92.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 75143748 - NM_005697 SCAMP2 1 0.08 0.26 13 6.55 83.78 16 4.68 No 19 0.49 No 0 0 No -18 0.75 Yes 52 77.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 75144558 - NM_005697 SCAMP2 1 0.03 0.1 7 0.77 0 27 6.24 Yes 14 1.9 Yes 29 0.95 Yes -26 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 75145838 - NM_005697 SCAMP2 1 0.4 1.08 47 3.88 81.75 23 4.69 No 55 1.51 Yes 26 0.74 Yes -22 0.72 Yes 48 73.12 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 75161468 - NM_005697 SCAMP2 1 0.1 0.29 16 6.86 90.21 27 5.74 Yes 71 -0.31 No 0 0 No -26 0.66 No 44 60.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155227126 - NM_052837 SCAMP3 1 0.71 1.81 57 8.65 97.82 48 6.96 Yes 35 1.58 Yes 0 0 No -36 0.82 Yes 34 81.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155227126 - NM_052837 SCAMP3 1 0.06 0.15 9 8.65 97.82 48 6.96 Yes 35 1.58 Yes 0 0 No -36 0.82 Yes 34 81.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155227445 - NM_052837 SCAMP3 1 0.27 0.79 37 -0.07 0 27 6.56 Yes 14 1.27 Yes 0 0 No -26 0.94 Yes 44 95.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155228684 - NM_052837 SCAMP3 1 1.08 2.44 61 9.43 93.14 18 4.9 No 5 0.4 No 22 0.64 Yes -22 0.53 No 48 71.82 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 155228704 - NM_052837 SCAMP3 1 3.44 7.76 72 8.2 91.54 31 6.51 Yes 34 0.04 No 22 0.64 Yes -33 0.21 No 40 50.31 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 155231526 - NM_052837 SCAMP3 1 312.59 143.93 72 10.46 89.43 23 5.39 No 10 0.31 No 22 0.91 Yes -22 0.8 Yes 43 47.75 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 1915430 + NM_079834 SCAMP4 1 0.94 0.42 26 8.5 88.57 23 6.39 Yes 10 2.03 Yes 22 0.94 Yes -22 0.78 Yes 48 74.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1920646 + NM_079834 SCAMP4 1 1.35 0.51 26 9.25 84.04 30 6 Yes 58 -2.39 No 29 0.38 Yes -29 0.56 No 41 81.19 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 75310734 + NM_001178111 SCAMP5 1 1.15 0.24 14 11.48 82.5 14 6.71 Yes 67 0.76 No 20 0.35 Yes -26 0.42 No 50 60.68 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 47455482 - NM_012235 SCAP 1 0.32 0.31 17 1.78 72.89 22 6.65 Yes 45 0.78 Yes 0 0 No -21 0.64 No 49 55.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47455740 - NM_012235 SCAP 1 0.27 0.22 13 5.28 80.2 50 7.05 Yes 37 1.35 Yes 0 0 No -26 0.86 Yes 44 90.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47456175 - NM_012235 SCAP 1 0.3 0.38 19 0.65 68.77 17 5.37 No 39 0.37 No 19 0.75 Yes -17 0.51 No 54 54.89 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 47456475 - NM_012235 SCAP 1 0.17 0.26 16 -1.87 0 12 4.24 No 17 0.67 No 0 0 No -29 0.8 Yes 30 87.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47459117 - NM_012235 SCAP 1 6.92 0.53 27 3.63 76.58 34 4.96 No 21 2.16 Yes 0 0 No -20 0.55 No 42 41.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47459314 - NM_012235 SCAP 1 863.96 53.75 72 5.26 81.35 51 11.22 Yes 61 2.68 Yes 22 0.94 Yes -25 0.94 Yes 45 85.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 47462744 - NM_012235 SCAP 1 0.33 0.29 17 9.84 85.79 29 5.48 No 44 -1.55 No 0 0 No -28 0.91 Yes 42 94.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47481465 - NM_012235 SCAP 1 0.1 0.13 8 7.77 88.46 31 5.91 Yes 18 0.41 No 0 0 No -30 0.53 No 42 60.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47507938 - NM_012235 SCAP 1 0.55 0.15 10 13.46 98.6 41 6.53 Yes 73 0.41 No 0 0 No -40 0.81 Yes 30 79.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 76790742 - NM_001145923 SCAPER 1 0.55 0.11 8 6.96 80.88 35 6.3 Yes 43 0.7 No 0 0 No -35 0.79 Yes 35 84.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 76859747 - NM_001145923 SCAPER 1 4.54 0.5 25 10.14 89.13 36 5.82 Yes 66 -1.74 No 26 0.29 Yes -24 0.49 No 44 59.43 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 76916323 - NM_001145923 SCAPER 1 0.69 0.11 7 10.3 93.79 36 6.32 Yes 23 0.18 No 0 0 No -28 0.49 No 42 61.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 76936020 - NM_001145923 SCAPER 1 4.17 0.74 37 6.47 83.64 27 5.41 No 14 1.39 Yes 0 0 No -26 0.75 Yes 44 78.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 76953655 - NM_001145923 SCAPER 1 2.25 0.42 22 9.3 78 26 5.36 No 49 0.21 No 0 0 No -25 0.76 Yes 45 78.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 76993435 - NM_001145923 SCAPER 1 16.86 2.17 63 11.15 92.63 20 6.63 Yes 7 0.99 Yes 0 0 No -23 0.78 Yes 47 82.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 77020817 - NM_001145923 SCAPER 1 2.59 0.4 25 6.33 80.49 22 4.48 No 45 0.15 No 0 0 No -26 0.78 Yes 44 79.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 77023657 - NM_001145923 SCAPER 1 0.94 0.28 15 5.36 79.17 71 8.25 Yes 47 1.05 Yes 0 0 No -40 0.92 Yes 30 93.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 77031779 - NM_001145923 SCAPER 1 1.34 0.38 21 2.81 65.59 29 6.85 Yes 16 1.16 Yes 0 0 No -33 0.78 Yes 37 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 77051710 - NM_001145923 SCAPER 1 0.9 0.21 13 11.66 95.47 33 6.15 Yes 73 -1.81 No 0 0 No -27 0.56 No 43 78.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 77064289 - NM_001145923 SCAPER 1 1.75 0.46 25 1.81 0 10 4 No 18 1.57 Yes 0 0 No -26 0.57 No 44 74.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 125265248 - NM_005505 SCARB1 1 0.26 0.29 17 8.62 86.99 65 8.17 Yes 52 0.63 No 0 0 No -33 0.38 No 37 46.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 125267355 - NM_005505 SCARB1 1 0.36 0.38 22 -11.84 78.66 26 5.24 No 47 0.5 No 0 0 No -26 0.69 Yes 44 80.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 125267374 - NM_005505 SCARB1 1 0.2 0.21 13 0.07 55.34 53 6.83 Yes 28 0.51 No 23 0.52 Yes -19 0.38 No 32 27.27 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 125269048 - NM_005505 SCARB1 1 0.38 0.4 19 8.26 83.49 39 5.41 No 2 1 Yes 0 0 No -28 0.59 No 42 76.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 125271048 - NM_005505 SCARB1 1 0.08 0.22 13 -4.62 73.91 29 6.3 Yes 16 1.26 Yes 26 0.94 Yes -28 0.97 Yes 42 97.08 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 125283904 - NM_005505 SCARB1 1 0.04 0.11 7 6.11 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.74 Yes 51 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 125289255 - NM_005505 SCARB1 1 0.05 0.15 10 9.75 90.91 30 4.42 No 57 -2.12 No 0 0 No -29 0.59 No 41 54.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 125294812 - NM_005505 SCARB1 1 0.51 1.49 52 5.86 69.11 21 5.74 Yes 61 -0.94 No 0 0 No -20 0.87 Yes 50 86.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 125294855 - NM_005505 SCARB1 1 0.06 0.17 8 -5.87 0 11 4.12 No 74 -3.48 No 29 0.66 Yes -29 0.52 No 37 66.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 125298397 - NM_005505 SCARB1 1 0.04 0.13 9 0.64 67.55 33 6.59 Yes 20 1.86 Yes 0 0 No -32 0.4 No 38 74.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 125347044 - NM_005505 SCARB1 1 1.85 3.6 67 9.06 83.95 23 5.85 Yes 10 0.46 No 22 0.78 Yes -22 0.66 No 48 61.76 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 77100707 - NM_005506 SCARB2 1 0.4 0.13 7 9.03 87.26 29 5.86 Yes 2 0.61 No 0 0 No -27 0.41 No 43 48.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 77105934 - NM_005506 SCARB2 1 0.27 0.19 11 6.42 87 23 6.56 Yes 31 0.99 Yes 27 0.41 Yes -27 0.43 No 43 61.19 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 77106409 - NM_005506 SCARB2 1 0.21 0.21 10 9.25 87.83 23 4.66 No 14 1.01 Yes 0 0 No -22 0.81 Yes 48 90.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 246905691 + NM_016002 SCCPDH 1 0.27 0.25 14 9.34 81.62 14 4.61 No 50 0.75 No 0 0 No -25 0.83 Yes 45 74.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 102110871 + NM_005063 SCD 1 0.07 0.25 15 3.89 82.53 19 5 No 6 0.53 No 0 0 No -18 0.68 Yes 52 76.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 102112378 + NM_005063 SCD 1 0.19 0.81 37 8.83 77.47 31 5.9 Yes 18 1.55 Yes 0 0 No -30 0.81 Yes 40 92.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31104127 + NM_001257376 SCFD1 1 0.08 0.18 12 9.78 87.94 17 5.54 No 43 -2.62 No 27 0.51 Yes -29 0.44 No 48 35.93 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 31104347 + NM_001257376 SCFD1 1 0.09 0.18 11 7.3 75.92 29 6.24 Yes 16 0.85 Yes 0 0 No -28 0.91 Yes 42 93.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31107389 + NM_001257376 SCFD1 1 0.26 0.5 29 3.98 78.65 34 6.08 Yes 68 0.21 No 21 0.37 Yes -24 0.57 No 46 46.14 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 31113085 + NM_001257376 SCFD1 1 0.54 1.17 45 10.32 83.28 61 7.98 Yes 48 1.54 Yes 30 0.81 Yes -30 0.69 Yes 40 66.81 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 31127288 + NM_001257376 SCFD1 1 5.51 11.97 72 7.99 90.94 42 5.53 No 16 1.63 Yes 28 0.8 Yes -28 0.77 Yes 42 82.85 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 31142440 + NM_001257376 SCFD1 1 0.24 0.69 31 6.81 76.2 36 6.91 Yes 3 0.73 No 26 0.9 Yes -35 0.62 No 35 84.01 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 31143136 + NM_001257376 SCFD1 1 0.24 0.61 32 -5.44 0 13 4 No 54 0.75 No 0 0 No -27 0.8 Yes 43 62.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 31144967 + NM_001257376 SCFD1 1 0.12 0.21 13 1.78 61.15 54 7.84 Yes 35 1.85 Yes 0 0 No -47 0.6 No 23 69.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 31145187 + NM_001257376 SCFD1 1 0.57 0.93 42 8.46 91.81 44 9.38 Yes 31 1.17 Yes 0 0 No -26 0.8 Yes 44 76.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 31166970 + NM_001257376 SCFD1 1 0.05 0.13 8 8.05 74.91 18 5.8 Yes 63 0.64 No 0 0 No -27 0.42 No 43 49.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31169396 + NM_001257376 SCFD1 1 0.64 1.6 58 4.77 80.31 49 7.18 Yes 11 1.48 Yes 0 0 No -23 0.76 Yes 31 33.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 31175007 + NM_001257376 SCFD1 1 0.1 0.24 15 -2.76 0 17 3.2 No 32 -4.36 No 23 0.69 Yes -16 0.56 No 54 77.53 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 31177022 + NM_001257376 SCFD1 1 1.29 2.79 67 4.4 64.22 46 6.81 Yes 33 0.86 Yes 31 0.67 Yes -31 0.53 No 39 47.25 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 53774883 - NM_152540 SCFD2 1 0.67 0.5 23 6 76.95 29 8.04 Yes 36 1.01 Yes 0 0 No -28 0.8 Yes 42 74.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 53810027 - NM_152540 SCFD2 1 0.14 0.11 8 8.88 83.94 32 5.7 Yes 19 0.87 Yes 0 0 No -26 0.71 Yes 44 82.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 53818632 - NM_152540 SCFD2 1 0.22 0.15 9 10.52 93.29 19 6.98 Yes 11 1.03 Yes 0 0 No -23 0.56 No 52 77.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 53883598 - NM_152540 SCFD2 1 0.31 0.24 16 8.27 87.94 46 5.65 Yes 1 0.29 No 0 0 No -25 0.62 No 38 70.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 53902538 - NM_152540 SCFD2 1 0.18 0.15 11 9.31 92.48 31 6.69 Yes 1 0.89 Yes 0 0 No -23 0.44 No 47 62.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 53906644 - NM_152540 SCFD2 1 0.71 0.57 28 9.47 84.94 29 7.07 Yes 16 1.05 Yes 0 0 No -28 0.95 Yes 42 97.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 53928018 - NM_152540 SCFD2 1 1.29 0.99 38 11.28 96.75 16 5.29 No 75 1.81 Yes 0 0 No -21 0.66 Yes 49 66.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 53928850 - NM_152540 SCFD2 1 0.17 0.14 8 4.34 71.14 26 4.63 No 67 0.47 No 0 0 No -25 0.71 Yes 45 61.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 53937432 - NM_152540 SCFD2 1 0.59 0.43 25 7.14 83.37 34 5.45 No -4 0.94 Yes 0 0 No -27 0.48 No 49 58.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 53990105 - NM_152540 SCFD2 1 0.35 0.26 15 9.41 82.43 13 5.06 No 0 0.62 No 0 0 No -28 0.78 Yes 42 88.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 54007986 - NM_152540 SCFD2 1 0.19 0.11 8 8.33 81.46 16 5.47 No 22 0.22 No 0 0 No -21 0.35 No 44 48.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 54009955 - NM_152540 SCFD2 1 0.19 0.13 7 8.88 75.06 71 8.68 Yes 59 -2.05 No 0 0 No -48 0.88 Yes 22 89.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 54073230 - NM_152540 SCFD2 1 2.27 1.51 51 5.97 92.85 32 5.67 Yes 74 -4.63 No 0 0 No -31 0.49 No 39 70.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 54078606 - NM_152540 SCFD2 1 0.3 0.15 10 1.13 79.31 132 13.07 Yes 60 0.98 Yes 0 0 No -37 0.46 No 33 69.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 54105179 - NM_152540 SCFD2 1 0.52 0.33 22 4.94 81.85 32 6.63 Yes 61 -2.33 No 0 0 No -31 0.84 Yes 39 73.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 54117579 - NM_152540 SCFD2 1 0.51 0.39 18 8.85 88.97 32 7.18 Yes 19 1.13 Yes 0 0 No -31 0.88 Yes 39 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54122869 - NM_152540 SCFD2 1 0.82 0.53 23 -0.87 0 32 7.87 Yes 19 1.81 Yes 0 0 No -31 0.9 Yes 39 92.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54144523 - NM_152540 SCFD2 1 1.96 2.06 54 9.93 85.05 39 7.07 Yes 26 1.76 Yes 0 0 No -38 0.93 Yes 32 94.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 54145631 - NM_152540 SCFD2 1 0.41 0.46 20 7.7 83.67 26 4.63 No 13 0.5 No 0 0 No -25 0.91 Yes 45 93.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 54146680 - NM_152540 SCFD2 1 0.82 0.79 41 10.89 95.65 32 6.55 Yes 37 0.17 No 0 0 No -34 0.57 No 36 49.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 54213534 - NM_152540 SCFD2 1 0.1 0.13 8 6.29 82.37 31 6.52 Yes 18 0.95 Yes 0 0 No -22 0.64 No 48 85.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 5118882 - NM_001319190 SCIMP 1 0.04 0.11 7 3.77 77.41 15 4.83 No 2 1.52 Yes 0 0 No -26 0.58 No 44 31.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 5118902 - NM_001319190 SCIMP 1 0.07 0.17 10 1.42 0 46 7.53 Yes 68 1.18 Yes 0 0 No -45 0.94 Yes 25 89.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5126456 - NM_001319190 SCIMP 1 0.9 0.44 25 7.58 82.93 27 6.32 Yes 14 2.13 Yes 0 0 No -26 0.89 Yes 44 91.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129808228 - NM_144643 SCLT1 1 1.02 0.24 16 9.02 77.64 29 5.25 No 16 1.35 Yes 0 0 No -28 0.81 Yes 42 76.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129847713 - NM_144643 SCLT1 1 1.92 0.99 45 6.56 87.51 16 6.21 Yes 38 0.94 Yes 0 0 No -22 0.92 Yes 48 86.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129861050 - NM_144643 SCLT1 1 2.56 1.33 44 5.35 70.62 22 6.28 Yes 13 1.53 Yes 0 0 No -25 0.56 No 45 65.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 129867073 - NM_144643 SCLT1 1 0.31 0.19 13 8.5 90.82 33 6.08 Yes 20 1.01 Yes 0 0 No -32 0.75 Yes 38 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129867320 - NM_144643 SCLT1 1 1.63 0.89 36 -0.63 59.84 37 6.22 Yes 36 1.18 Yes 18 0.53 Yes -36 0.91 Yes 34 83.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 129872817 - NM_144643 SCLT1 1 0.27 0.17 10 0.49 57.91 41 5.37 No 73 0.74 No 0 0 No -32 0.7 Yes 38 67.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 129873688 - NM_144643 SCLT1 1 0.39 0.28 15 6.6 86.04 19 6.94 Yes 6 1.22 Yes 24 0.88 Yes -19 0.59 No 39 49.99 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 129893508 - NM_144643 SCLT1 1 2.11 1.26 40 6.11 90.33 30 6.85 Yes 51 1.37 Yes 0 0 No -29 0.69 Yes 41 79.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129897479 - NM_144643 SCLT1 1 0.33 0.21 13 5.61 81.38 18 4.43 No 26 0.76 No 0 0 No -26 0.57 No 42 81.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 129900878 - NM_144643 SCLT1 1 0.27 0.15 7 11.96 92.4 54 6.05 Yes 2 0.95 Yes 0 0 No -27 0.69 Yes 43 78.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129922101 - NM_144643 SCLT1 1 0.18 0.28 13 9.48 82.63 30 4.7 No 42 -2.35 No 0 0 No -22 0.72 Yes 46 60.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 129942800 - NM_144643 SCLT1 1 0.32 0.15 9 7.74 89.43 26 6.19 Yes 13 1.83 Yes 0 0 No -25 0.92 Yes 45 94.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 129957478 - NM_144643 SCLT1 1 2.49 1.35 53 9.72 92.67 53 7.06 Yes 32 0.39 No 0 0 No -27 0.49 No 38 40.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 129959282 - NM_144643 SCLT1 1 19.54 10.22 72 1.8 0 29 9.65 Yes 7 1.44 Yes 28 0.91 Yes -28 0.86 Yes 42 92.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 129959286 - NM_144643 SCLT1 1 0.77 0.42 26 0.17 83.95 25 9.47 Yes 3 1.47 Yes 28 0.91 Yes -24 0.84 Yes 46 92.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 129960246 - NM_144643 SCLT1 1 0.23 0.14 9 3.36 0 9 3.87 No 62 -2.92 No 0 0 No -30 0.64 No 42 68.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 129961368 - NM_144643 SCLT1 1 24.31 14.01 72 8.1 87.55 28 6.4 Yes 0 0.48 No 27 0.78 Yes -27 0.73 Yes 43 82.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 129965203 - NM_144643 SCLT1 1 0.23 0.18 9 -2.62 0 25 5.37 No 73 -5.18 No 0 0 No -24 0.79 Yes 46 65.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 129994433 - NM_144643 SCLT1 1 1.6 1.67 50 7.18 88.19 23 5.88 Yes 10 0.64 No 0 0 No -22 0.96 Yes 48 96.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 129997813 - NM_144643 SCLT1 1 4.07 4.17 69 7.86 94.76 28 7.3 Yes 15 0.27 No 0 0 No -27 0.51 No 43 48.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 130001956 - NM_144643 SCLT1 1 0.63 0.64 36 7.45 89.91 17 4.79 No 36 1.27 Yes 0 0 No -48 0.51 No 48 51.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 41494418 - NR_135092 SCMH1 1 1.87 0.54 29 7.74 76.98 29 5.29 No 67 -3.18 No 26 0.73 Yes -26 0.58 No 42 58.15 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 41494418 - NR_135092 SCMH1 1 1.1 0.28 17 7.74 76.98 29 5.29 No 67 -3.18 No 26 0.73 Yes -26 0.58 No 42 58.15 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 41494537 - NR_135092 SCMH1 1 0.51 0.17 11 6.55 82.71 23 5.29 No 52 -0.62 No 0 0 No -22 0.76 Yes 48 76.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 41496792 - NR_135092 SCMH1 1 0.8 0.17 10 8.25 83.98 22 5.74 Yes 65 1.42 Yes 0 0 No -21 0.72 Yes 49 80.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 41537646 - NR_135092 SCMH1 1 1.08 0.67 34 8.27 85.5 26 7.06 Yes 13 0.77 No 0 0 No -25 0.85 Yes 45 82.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 41553183 - NR_135092 SCMH1 1 0.35 0.15 11 14.11 99.45 23 6.48 Yes 41 0.91 Yes 0 0 No -27 0.75 Yes 43 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 41571498 - NR_135092 SCMH1 1 0.51 0.24 13 4.42 76.98 23 4.37 No 75 0.42 No 0 0 No -20 0.9 Yes 50 90.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 41579226 - NR_135092 SCMH1 1 2.25 1.22 45 11.1 86.85 22 6.48 Yes 61 0.79 Yes 29 0.38 Yes -24 0.44 No 46 67.64 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 41611858 - NR_135092 SCMH1 1 0.47 0.26 14 -0.78 58.94 56 7.91 Yes 43 0.83 Yes 0 0 No -48 0.42 No 22 62.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 41626568 - NR_135092 SCMH1 1 1.68 0.89 38 2.59 78.13 35 8.22 Yes 22 1.09 Yes 0 0 No -30 0.77 Yes 40 81.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 10585865 - NM_004589 SCO1 1 0.06 0.13 8 7 93.84 24 5.1 No 75 0.5 No 0 0 No -19 0.63 No 51 82.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 10594967 - NM_004589 SCO1 1 0.28 0.5 25 8.39 86.17 29 5.57 Yes 16 1.52 Yes 0 0 No -28 0.82 Yes 42 87.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 10595278 - NM_004589 SCO1 1 0.21 0.46 21 0.34 0 23 6.92 Yes 10 0.99 Yes 0 0 No -22 0.86 Yes 48 90.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 10595317 - NM_004589 SCO1 1 0.19 0.44 21 12.93 86.37 31 7.74 Yes 76 0.26 No 18 0.83 Yes -30 0.78 Yes 40 90.41 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 10599152 - NM_004589 SCO1 1 2.09 2.06 61 2.3 74.93 35 6.1 Yes 36 0.46 No 34 0.58 Yes -34 0.56 No 36 79.32 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr4 141300725 + NM_032547 SCOC 1 2.44 3.33 65 1.05 78.21 36 5.21 No 55 0.03 No 0 0 No -35 0.38 No 35 51.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 53458929 + NM_001193617 SCP2 1 4.75 0.93 43 2.27 75.2 48 7 Yes 40 0.74 No 42 0.17 Yes -42 0.82 Yes 28 83.09 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 53468459 + NM_001193617 SCP2 1 5.36 0.99 37 3.4 74.85 22 4.94 No 65 0.85 Yes 0 0 No -22 0.38 No 48 47.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 53493649 + NM_001193617 SCP2 1 0.44 1.15 44 3.99 0 12 4.24 No 17 0.44 No 20 0.59 Yes -29 0.8 Yes 41 74.43 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 53515121 + NM_001193617 SCP2 1 0.03 0.11 8 3.45 79.37 26 5.18 No 67 1.54 Yes 0 0 No -25 0.57 No 50 80.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 55062036 + NM_021626 SCPEP1 1 0.3 0.29 18 7.53 86.88 27 5.74 Yes 14 0.66 No 0 0 No -26 0.82 Yes 44 89.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 55065580 + NM_021626 SCPEP1 1 0.2 0.19 13 3.98 0 32 6.08 Yes 9 1.04 Yes 0 0 No -31 0.84 Yes 39 89.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55072265 + NM_021626 SCPEP1 1 0.09 0.11 7 11.47 85.87 36 6.25 Yes 45 -0.42 No 35 0.27 Yes -35 0.35 No 47 60.93 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 55073443 + NM_021626 SCPEP1 1 0.2 0.28 16 12 98.86 31 5.57 Yes 18 0.84 Yes 0 0 No -30 0.93 Yes 40 93.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 55075328 + NM_021626 SCPEP1 1 1.57 2.39 61 11.43 92.35 19 5.37 No 40 1.88 Yes 24 0.75 Yes -24 0.62 No 52 65.12 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 55075734 + NM_021626 SCPEP1 1 0.28 0.4 23 4.89 77.97 32 5.2 No 4 1.29 Yes 31 0.72 Yes -27 0.71 Yes 45 62.81 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 55075746 + NM_021626 SCPEP1 1 0.11 0.17 10 -13.79 0 18 4.45 No 16 1.27 Yes 0 0 No -24 0.53 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 55076632 + NM_021626 SCPEP1 1 0.16 0.19 11 8.19 83.05 29 5.66 Yes -2 1.43 Yes 0 0 No -28 0.93 Yes 42 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144873855 - NM_015356 SCRIB 1 1.36 1.06 44 8.59 87.52 35 6 Yes 60 1.79 Yes 0 0 No -29 0.73 Yes 41 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144873911 - NM_015356 SCRIB 1 2.59 1.96 59 5.98 75.62 36 7.68 Yes 41 1.9 Yes 35 0.88 Yes -35 0.89 Yes 35 92.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 144874572 - NM_015356 SCRIB 1 0.26 0.28 17 5.82 0 30 5.83 Yes 39 1.33 Yes 25 0.69 Yes -24 0.66 Yes 46 67.06 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 144874802 - NM_015356 SCRIB 1 0.47 0.54 27 -0.23 0 26 8.31 Yes 13 2.22 Yes 0 0 No -25 0.83 Yes 45 76.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144875053 - NM_015356 SCRIB 1 0.34 0.39 21 -1.4 0 10 4.4 No NA NA NA 18 0.83 Yes -14 0.22 No 61 30.87 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 144875511 - NM_015356 SCRIB 1 0.87 0.94 38 9.43 79.33 46 10.96 Yes 33 2.21 Yes 0 0 No -45 0.66 No 25 85.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 144875782 - NM_015356 SCRIB 1 0.25 0.26 17 3.79 79.73 19 4.93 No 58 -3.57 No 18 0.67 Yes -18 0.77 Yes 52 87.5 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 144877021 - NM_015356 SCRIB 1 0.15 0.13 9 2.17 68.12 24 6 Yes 2 1.12 Yes 0 0 No -23 0.96 Yes 47 89.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144885056 - NM_015356 SCRIB 1 0.16 0.17 10 4.27 77.4 13 5.66 Yes 41 1.03 Yes 0 0 No -29 0.63 No 41 79.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 144886140 - NM_015356 SCRIB 1 0.22 0.29 17 -5.87 0 14 4.47 No 73 -2.21 No 31 0.66 Yes -13 0.27 No 55 32.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 144887212 - NM_015356 SCRIB 1 0.3 0.29 19 1.26 0 9 4.58 No 15 1.13 Yes 35 0.74 Yes -19 0.43 No 43 66.64 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 144887224 - NM_015356 SCRIB 1 0.15 0.13 7 -3.87 0 16 4.47 No 3 0.36 No 35 0.74 Yes -15 0.78 Yes 55 78.94 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 144887585 - NM_015356 SCRIB 1 0.14 0.13 9 6.82 85.18 19 5.48 No 6 -1 No 0 0 No -18 0.65 No 52 46.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 144889767 - NM_015356 SCRIB 1 0.1 0.13 8 2.27 83.39 23 4.8 No 38 1.65 Yes 0 0 No -22 0.87 Yes 48 92.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144891828 - NM_015356 SCRIB 1 0.16 0.18 11 -1.81 0 28 4.68 No 68 2.18 Yes 0 0 No -31 0.64 No 39 44.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 144892127 - NM_015356 SCRIB 1 0.13 0.15 9 11.18 88.88 47 5.62 Yes 39 -0.54 No 0 0 No -27 0.65 No 48 57.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 144893152 - NM_015356 SCRIB 1 0.07 0.1 7 5.76 82.65 16 4.66 No 54 2.06 Yes 0 0 No -20 0.57 No 50 43.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 144893200 - NM_015356 SCRIB 1 0.2 0.29 18 5.31 74.08 19 6.56 Yes 6 2.1 Yes 0 0 No -18 0.81 Yes 52 56.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 144894294 - NM_015356 SCRIB 1 0.21 0.36 20 5.22 90.11 24 5.1 No 25 0.75 No 0 0 No -23 0.92 Yes 47 93.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 144894522 - NM_015356 SCRIB 1 0.08 0.11 7 -1.58 0 26 5.29 No 51 1.32 Yes 0 0 No -25 0.64 No 49 31.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 144894526 - NM_015356 SCRIB 1 0.35 0.53 28 3.39 80.13 22 4.9 No 47 1.33 Yes 0 0 No -21 0.59 No 53 41.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 144894550 - NM_015356 SCRIB 1 0.21 0.33 19 -2.75 0 36 6.48 Yes 23 1.35 Yes 0 0 No -35 0.96 Yes 35 94.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144895271 - NM_015356 SCRIB 1 0.17 0.28 17 1.31 0 31 4.9 No 24 1.03 Yes 0 0 No -30 0.72 Yes 40 74.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144895716 - NM_015356 SCRIB 1 0.22 0.38 20 9.65 83.8 26 7.48 Yes 76 0.29 No 21 0.69 Yes -27 0.89 Yes 44 72.01 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 29963748 - NM_014766 SCRN1 1 0.71 0.88 36 -0.04 60.79 48 6.04 Yes 1 0.94 Yes 22 0.86 Yes -35 0.87 Yes 35 78.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 29966191 - NM_014766 SCRN1 1 0.07 0.11 8 1.54 67.59 27 5.99 Yes 69 1 Yes 0 0 No -29 0.65 No 41 62.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 30006032 - NM_014766 SCRN1 1 0.88 1.39 46 5.86 80.38 29 5.5 No 55 1.76 Yes 0 0 No -28 0.76 Yes 42 72.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 45916086 - NM_138355 SCRN2 1 2.82 0.54 28 9.88 79.78 18 5.28 No 56 -3.54 No 21 0.67 Yes -21 0.72 Yes 50 73.18 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 45917225 - NM_138355 SCRN2 1 0.61 0.13 7 8.28 78.36 33 5.68 Yes 2 1.05 Yes 32 0.79 Yes -32 0.77 Yes 38 82.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 175262063 + NM_024583 SCRN3 1 0.9 0.15 11 5.67 82.66 24 6.52 Yes 11 0.39 No 24 0.54 Yes -24 0.31 No 46 54.87 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 175263093 + NM_024583 SCRN3 1 3.94 0.64 31 1.26 59.72 28 5.66 Yes 51 1.3 Yes 27 0.78 Yes -27 0.85 Yes 43 78.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 65293024 + NM_020680 SCYL1 1 1.82 2.14 58 1.5 75.36 22 4.77 No 55 0.61 No 22 0.91 Yes -24 0.35 No 51 56.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 65293395 + NM_020680 SCYL1 1 0.31 0.33 20 4.68 0 26 6.66 Yes 13 1.59 Yes 0 0 No -25 0.73 Yes 45 75.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65293598 + NM_020680 SCYL1 1 0.31 0.49 27 -1.2 0 25 6.78 Yes 12 0.9 Yes 0 0 No -24 0.84 Yes 46 86.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65293626 + NM_020680 SCYL1 1 0.1 0.17 10 2.28 70.16 24 5.48 No 11 1.12 Yes 0 0 No -23 0.58 No 47 49.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65294516 + NM_020680 SCYL1 1 0.33 0.43 20 6.99 83.87 21 4.79 No 47 -2.18 No 0 0 No -21 0.55 No 50 70.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 65303455 + NM_020680 SCYL1 1 0.07 0.13 8 6.83 83.41 15 5.48 No 59 1.78 Yes 0 0 No -27 0.44 No 56 54.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 65304061 + NM_020680 SCYL1 1 0.19 0.18 9 -4.82 0 45 9.16 Yes 32 2.05 Yes 25 0.73 Yes -30 0.5 No 26 76.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 65304188 + NM_020680 SCYL1 1 0.33 0.26 16 5.54 77.53 32 6.51 Yes 49 1.59 Yes 0 0 No -31 0.72 Yes 39 75.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65304459 + NM_020680 SCYL1 1 0.6 0.28 16 -18.51 68.58 20 4.29 No 7 0.81 Yes 0 0 No -23 0.94 Yes 47 80.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65304507 + NM_020680 SCYL1 1 105 50.61 72 5.3 80.32 32 6.59 Yes 55 0.82 Yes 31 0.59 Yes -31 0.55 No 32 66.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 65305282 + NM_020680 SCYL1 1 4.84 4.96 69 2.8 74.46 27 5.74 Yes 42 1.22 Yes 23 0.93 Yes -26 0.82 Yes 44 71.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 65305474 + NM_020680 SCYL1 1 0.26 0.38 24 3.97 76.42 31 3.98 No 22 -2.48 No 24 0.68 Yes -24 0.53 No 46 56.48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 65305917 + NM_020680 SCYL1 1 0.12 0.13 8 0.34 0 34 6.32 Yes 0 1.08 Yes 28 0.88 Yes -33 0.69 Yes 58 40.52 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 65305917 + NM_020680 SCYL1 1 2.49 2.47 61 0.34 0 34 6.32 Yes 0 1.08 Yes 28 0.88 Yes -33 0.69 Yes 58 40.52 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 100669004 + NM_001317784 SCYL2 1 0.32 0.15 10 4.37 0 32 6.86 Yes 70 0.28 No 0 0 No -32 0.82 Yes 38 75.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 100690539 + NM_001317784 SCYL2 1 3.11 4 70 7.69 91.96 25 5.19 No 12 0.06 No 24 0.53 Yes -25 0.81 Yes 45 79.69 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 100713001 + NM_001317784 SCYL2 1 0.08 0.14 8 7.5 74.74 23 5.82 Yes 10 1.39 Yes 22 0.84 Yes -22 0.69 Yes 48 77.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 100718715 + NM_001317784 SCYL2 1 0.86 1.01 41 1.83 75.01 19 6.43 Yes 6 0.88 Yes 0 0 No -24 0.83 Yes 46 79.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 100720962 + NM_001317784 SCYL2 1 0.1 0.11 8 5.82 84.18 30 5.71 Yes 38 -0.92 No 29 0.79 Yes -29 0.51 No 41 50.15 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 100721755 + NM_001317784 SCYL2 1 0.52 0.63 26 5.3 85.25 15 5.92 Yes 2 0.23 No 0 0 No -28 0.44 No 42 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 100725503 + NM_001317784 SCYL2 1 0.34 0.44 20 8.1 88.94 26 6.34 Yes 13 0.74 No 0 0 No -25 0.78 Yes 45 78.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 100726517 + NM_001317784 SCYL2 1 0.11 0.15 9 4.19 0 57 6.42 Yes 44 1.48 Yes 0 0 No -28 0.65 No 14 64.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169824999 - NM_020423 SCYL3 1 1.01 0.47 28 6.1 90.55 20 6.24 Yes 7 1.38 Yes 0 0 No -19 0.58 No 38 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 169825074 - NM_020423 SCYL3 1 0.42 0.19 11 9.13 83.78 34 5.8 Yes 41 0.55 No 0 0 No -33 0.92 Yes 37 90.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 169825099 - NM_020423 SCYL3 1 4.33 1.92 60 8.63 92.6 13 5.1 No 16 0.55 No 28 0.31 Yes -28 0.85 Yes 42 88.11 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 169838270 - NM_020423 SCYL3 1 5.03 2.11 61 8.92 89.53 35 5.91 Yes 57 0.32 No 28 0.39 Yes -35 0.56 No 38 69.63 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 169838270 - NM_020423 SCYL3 1 0.29 0.13 8 8.92 89.53 35 5.91 Yes 57 0.32 No 28 0.39 Yes -35 0.56 No 38 69.63 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr4 76886973 - NM_001288984 SDAD1 1 0.07 0.13 8 0.76 73.14 36 7.36 Yes 23 2.06 Yes 0 0 No -35 0.57 No 35 81.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 76893552 - NM_001288984 SDAD1 1 0.09 0.17 9 1.66 82.57 37 6.4 Yes 53 0.08 No 0 0 No -37 0.56 No 36 78.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 76902624 - NM_001288984 SDAD1 1 1383.91 177.44 72 8.2 90.85 25 5.1 No 36 -2.02 No 24 0.94 Yes -24 0.82 Yes 46 88.36 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 76902668 - NM_001288984 SDAD1 1 2.46 0.29 18 4.86 75.58 23 6.32 Yes 34 0.05 No 22 0.88 Yes -22 0.83 Yes 48 76.42 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 20423040 - NM_002997 SDC1 1 0.37 0.17 9 9.55 95.65 29 4.37 No 59 1.68 Yes 28 0.85 Yes -28 0.87 Yes 42 92.01 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 59488458 + NM_001330537 SDCBP 1 270.42 60.13 72 0.39 79.7 25 6.24 Yes 12 0.44 No 24 0.81 Yes -24 0.93 Yes 46 94.95 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 139297399 - NM_001039708 SDCCAG3 1 1.54 1.28 44 13.41 88.62 24 7.42 Yes 65 0.71 No 0 0 No -24 0.67 Yes 47 77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139303520 - NM_001039708 SDCCAG3 1 14.83 2.46 63 10.64 94.53 18 6.08 Yes 5 1.04 Yes 27 0.47 Yes -30 0.44 No 53 66.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 139304654 - NM_001039708 SDCCAG3 1 3.23 0.57 25 8.48 85.19 24 5.48 No 51 0.66 No 0 0 No -26 0.58 No 44 58.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139304692 - NM_001039708 SDCCAG3 1 36.45 6.1 72 8.14 83.44 26 5.57 Yes 13 0.65 No 25 0.64 Yes -26 0.57 No 44 63.21 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 243433393 + NM_006642 SDCCAG8 1 7.19 2.69 63 6.3 84.84 33 4.8 No -1 0.8 Yes 32 0.58 Yes -21 0.59 No 49 84.9 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 243451518 + NM_006642 SDCCAG8 1 0.46 0.25 15 3.74 74.11 17 5.57 Yes 64 0.62 No 0 0 No -24 0.75 Yes 46 76.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 243451521 + NM_006642 SDCCAG8 1 0.19 0.1 7 2.21 77.66 20 5.83 Yes 67 0.63 No 0 0 No -19 0.77 Yes 51 84.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 243452710 + NM_006642 SDCCAG8 1 0.25 0.14 7 5.9 80.96 24 6.24 Yes 11 1.66 Yes 0 0 No -23 0.81 Yes 47 90.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 243456423 + NM_006642 SDCCAG8 1 0.73 0.35 20 4.81 78.99 39 6.08 Yes 39 0.1 No 0 0 No -25 0.7 Yes 45 55.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 243456700 + NM_006642 SDCCAG8 1 19.78 6.92 71 8.13 89.95 26 4.22 No 63 1.11 Yes 25 0.81 Yes -25 0.68 Yes 45 77.84 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 243468313 + NM_006642 SDCCAG8 1 25.8 9.94 72 10.05 85.83 23 4.68 No 36 0.64 No 23 0.78 Yes -32 0.79 Yes 38 79.8 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 243471088 + NM_006642 SDCCAG8 1 5.33 1.97 52 5.36 80.29 20 5.52 No -1 0.5 No 0 0 No -24 0.48 No 51 74.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 243479803 + NM_006642 SDCCAG8 1 1.31 0.49 25 10.45 87.57 31 8.06 Yes 18 1.12 Yes 0 0 No -30 0.83 Yes 40 94.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 243480647 + NM_006642 SDCCAG8 1 1.64 0.42 25 3.01 0 34 6.08 Yes 35 0.05 No 0 0 No -33 0.63 No 40 80.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 243481338 + NM_006642 SDCCAG8 1 19.5 5.32 71 6.45 80.67 15 6 Yes 2 0.04 No 31 0.45 Yes -23 0.56 No 47 67.18 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 243543196 + NM_006642 SDCCAG8 1 1.61 0.43 23 2.85 74.12 25 4.71 No 41 1.46 Yes 0 0 No -18 0.37 No 46 39.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 226173176 - NM_152608 SDE2 1 0.74 0.4 18 8.53 83.96 14 4.26 No 1 0.44 No 0 0 No -23 0.93 Yes 47 94.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 26976156 - NM_006923 SDF2 1 1.53 1.33 54 6.8 86.09 22 5.29 No 9 0.6 No 21 0.75 Yes -21 0.77 Yes 49 67.76 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 26976291 - NM_006923 SDF2 1 0.54 0.51 26 -2.16 0 31 6.84 Yes 18 1.82 Yes 0 0 No -30 0.58 No 40 89.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 26978561 - NM_006923 SDF2 1 1.01 0.93 41 5.01 78.64 21 5.53 No 27 1 Yes 26 0.62 Yes -26 0.59 No 44 66.14 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 26978596 - NM_006923 SDF2 1 5.54 5 68 6.68 87.46 30 6.35 Yes 76 1.51 Yes 29 0.71 Yes -29 0.53 No 41 69.59 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 26982216 - NM_006923 SDF2 1 0.09 0.1 7 11.66 91.36 32 6.42 Yes 35 0.81 Yes 0 0 No -31 0.85 Yes 39 75.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26986910 - NM_006923 SDF2 1 1.13 0.6 30 3.98 82.52 22 6.39 Yes 9 0.8 Yes 0 0 No -21 0.9 Yes 49 85.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26988239 - NM_006923 SDF2 1 2.22 1.24 49 9.36 89.51 23 5.02 No 10 1.18 Yes 30 0.91 Yes -22 0.67 Yes 48 61.28 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 1153161 - NM_016176 SDF4 1 0.55 1.38 50 7.13 81.04 16 5.74 Yes 44 -0.34 No 0 0 No -24 0.43 No 47 30.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1153185 - NM_016176 SDF4 1 4.81 12.24 72 4.22 72.18 33 9 Yes 20 -0.34 No 32 0.86 Yes -32 0.89 Yes 38 95.83 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 1154009 - NM_016176 SDF4 1 0.28 0.82 38 2.07 0 25 6.93 Yes 12 2.19 Yes 0 0 No -24 0.8 Yes 46 90.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1154303 - NM_016176 SDF4 1 0.79 1.99 60 4.34 0 26 5.48 No 73 -4.27 No 0 0 No -25 0.84 Yes 45 74.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1154324 - NM_016176 SDF4 1 0.19 0.5 25 5.7 82.92 65 8.19 Yes 52 -4.31 No 38 0.08 Yes -38 0.39 No 44 49.48 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 1154386 - NM_016176 SDF4 1 0.13 0.31 19 3.59 0 36 5.93 Yes 72 -3.2 No 28 0.05 Yes -27 0.31 No 43 65.1 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 1156111 - NM_016176 SDF4 1 0.11 0.29 12 7.77 95.07 52 9.4 Yes 39 1.56 Yes 21 0.5 Yes -26 0.56 No 44 65.35 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 220354 + NM_004168 SDHA 1 1.54 3.36 44 5 84.2 32 6.34 Yes 36 0.55 No 31 0.87 Yes -31 0.83 Yes 39 90.8 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 235260 + NM_004168 SDHA 1 0.18 0.89 42 0.94 78.99 23 7.99 Yes 10 0.66 No 0 0 No -22 0.85 Yes 48 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 235295 + NM_004168 SDHA 1 0.03 0.17 9 5.58 80.29 15 4.03 No 45 0.64 No 0 0 No -23 0.88 Yes 47 83.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 240475 + NM_004168 SDHA 1 0.08 0.38 20 -9.23 82.22 28 5.23 No 52 1.17 Yes 0 0 No -27 0.49 No 43 56.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 240773 + NM_004168 SDHA 1 0.06 0.24 13 4.9 78.44 27 5.29 No 14 0.11 No 0 0 No -26 0.59 No 44 68.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 247613 + NM_004168 SDHA 1 0.05 0.17 12 7.47 71.11 33 5.68 Yes 10 1.32 Yes 0 0 No -32 0.62 No 38 62.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 248289 + NM_004168 SDHA 1 0.25 0.93 40 10.48 96.82 19 4.48 No 0 0.71 No 0 0 No -23 0.63 No 47 65.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 250705 + NM_004168 SDHA 1 0.07 0.25 16 5.45 82.9 18 4.9 No 30 0.36 No 0 0 No -27 0.39 No 43 90.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 254472 + NM_004168 SDHA 1 0.32 1.22 48 5.95 77.65 36 7.12 Yes 23 1.38 Yes 35 0.49 Yes -35 0.9 Yes 35 93.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 61204232 + NM_017841 SDHAF2 1 3.61 8.01 72 7.01 88.54 24 6.16 Yes 33 0.84 Yes 23 0.89 Yes -23 0.96 Yes 47 93.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 61204682 + NM_017841 SDHAF2 1 0.09 0.19 13 10.75 99.17 20 5.65 Yes 51 1.26 Yes 0 0 No -22 0.73 Yes 48 73.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61205072 + NM_017841 SDHAF2 1 0.14 0.33 16 -0.48 74.96 22 5.1 No 9 0.46 No 0 0 No -19 0.4 No 51 56.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 61205691 + NM_017841 SDHAF2 1 0.28 0.47 26 5.01 84.41 29 6.32 Yes 16 0.62 No 21 0.85 Yes -28 0.49 No 42 51.69 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 61205716 + NM_017841 SDHAF2 1 0.32 0.58 33 5.8 88.44 22 5.22 No 9 0.98 Yes 21 0.85 Yes -21 0.63 No 17 54.68 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 61205766 + NM_017841 SDHAF2 1 0.47 0.79 39 7.24 91.36 22 6.7 Yes 9 1.14 Yes 21 0.95 Yes -21 0.96 Yes 49 94.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 61206778 + NM_017841 SDHAF2 1 0.1 0.15 10 8.81 88.84 34 5.92 Yes 21 0.09 No 0 0 No -33 0.85 Yes 37 72.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61213415 + NM_017841 SDHAF2 1 0.14 0.24 13 -0.35 75.2 43 7.24 Yes 30 1.24 Yes 0 0 No -42 0.7 Yes 28 77.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 96765699 + NM_020186 SDHAF3 1 5.59 5.71 72 7.08 84.43 55 5.79 Yes 42 0.8 Yes 24 0.45 Yes -24 0.77 Yes 46 83.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 96771984 + NM_020186 SDHAF3 1 1.87 1.99 54 8.55 80.23 32 5.76 Yes 19 1.02 Yes 32 0.73 Yes -31 0.49 No 39 62.63 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 96786571 + NM_020186 SDHAF3 1 0.22 0.24 14 7.16 82.61 22 4.36 No 14 1.07 Yes 0 0 No -26 0.66 No 44 63.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 96789331 + NM_020186 SDHAF3 1 0.54 0.5 24 3.07 78.71 22 4.4 No 71 0.6 No 0 0 No -21 0.65 No 49 63.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 71277118 + NM_145267 SDHAF4 1 1.84 0.79 39 6.97 89.97 33 6.4 Yes 20 0.83 Yes 24 0.89 Yes -28 0.53 No 46 67.12 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 71277571 + NM_145267 SDHAF4 1 1.71 0.74 36 5.2 85.02 22 5.64 Yes 9 1.76 Yes 0 0 No -21 0.83 Yes 49 85.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 71277574 + NM_145267 SDHAF4 1 0.24 0.1 7 3.25 80.12 25 5.81 Yes 12 1.73 Yes 0 0 No -24 0.74 Yes 46 84.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 71286522 + NM_145267 SDHAF4 1 3.2 1.33 48 9.42 99.17 29 4.8 No 4 0.79 Yes 0 0 No -28 0.93 Yes 42 88.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 71295133 + NM_145267 SDHAF4 1 0.57 0.35 17 2.27 73.19 37 6.24 Yes 47 1.13 Yes 0 0 No -32 0.32 No 34 58.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 71295290 + NM_145267 SDHAF4 1 3.46 2.26 63 3.98 86.69 30 5.11 No 36 0.25 No 0 0 No -29 0.66 No 41 69.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 195687295 - NR_003264 SDHAP1 1 1.01 0.17 9 7.69 87 24 7.06 Yes 11 0.94 Yes 23 0.73 Yes -23 0.88 Yes 47 82.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 195689499 - NR_003264 SDHAP1 1 13.86 1.06 40 11.64 92.78 33 7.06 Yes 20 0.87 Yes 0 0 No -32 0.91 Yes 38 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195689499 - NR_003264 SDHAP1 1 2.46 0.22 13 11.64 92.78 33 7.06 Yes 20 0.87 Yes 0 0 No -32 0.91 Yes 38 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195692449 - NR_003264 SDHAP1 1 4.55 0.83 35 5.95 77.65 36 7.14 Yes 23 1.4 Yes 35 0.5 Yes -35 0.91 Yes 35 92.08 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 195709224 - NR_003264 SDHAP1 1 0.73 0.13 8 4.97 72.83 28 5.55 No 28 0.93 Yes 27 0.58 Yes -32 0.56 No 20 42.53 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 195388103 + NR_003265 SDHAP2 1 4.38 0.5 24 3.86 75.39 26 5.85 Yes 13 1.08 Yes 0 0 No -25 0.79 Yes 45 87.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195401690 + NR_003265 SDHAP2 1 1.21 0.22 14 11.53 97.77 22 6.32 Yes 56 0.72 No 0 0 No -21 0.88 Yes 49 84.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 195405905 + NR_003265 SDHAP2 1 0.34 0.15 11 7.68 77.81 23 4.27 No 59 0.56 No 0 0 No -23 0.76 Yes 47 75.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 1575787 - NR_003263 SDHAP3 1 2.04 0.29 16 5.45 76.92 30 5.66 Yes 66 0.67 No 0 0 No -29 0.72 Yes 41 92.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 17359640 - NM_003000 SDHB 1 0.02 0.11 7 -13.51 0 30 6.17 Yes 50 -3.17 No 0 0 No -23 0.62 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 17374008 - NM_003000 SDHB 1 0.08 0.26 16 6.13 85.02 23 7.35 Yes 10 1.74 Yes 0 0 No -22 0.86 Yes 48 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 17378636 - NM_003000 SDHB 1 0.05 0.17 10 6.4 85.44 20 4.15 No 57 0.05 No 0 0 No -20 0.91 Yes 50 87.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 161288514 + NR_103459 SDHC 1 0.09 0.29 15 6.61 90.7 20 7.77 Yes 7 1.51 Yes 0 0 No -19 0.39 No 15 52.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 161296440 + NR_103459 SDHC 1 0.27 0.85 34 2.84 0 38 5.74 Yes 25 0.9 Yes 30 0.69 Yes -37 0.52 No 33 58.67 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 111958582 + NR_077060 SDHD 1 0.02 0.1 7 -20.11 0 19 5.53 No 3 1.51 Yes 0 0 No -30 0.87 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 24909615 - NM_020195 SDR39U1 1 0.26 0.19 11 2.32 78.23 49 9.26 Yes NA NA NA 37 0.16 Yes -46 0.68 Yes 24 72.29 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 85214031 - NM_001271918 SEC11A 1 0.24 0.61 34 0.23 72.05 40 6.39 Yes 27 0.46 No 25 0.68 Yes -25 0.76 Yes 45 76.04 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 85223201 - NM_001271918 SEC11A 1 0.07 0.21 15 6.6 89.4 17 3.87 No 4 0.68 No 22 0.76 Yes -20 0.57 No 50 73.49 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 85223529 - NM_001271918 SEC11A 1 0.05 0.11 8 4.8 83.28 33 4.42 No 29 1.02 Yes 0 0 No -30 0.7 Yes 40 82.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 85231814 - NM_001271918 SEC11A 1 0.07 0.29 15 4.86 78.87 35 6.13 Yes 22 1.46 Yes 0 0 No -34 0.64 No 42 61.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 85257679 - NM_001271918 SEC11A 1 0.52 0.18 10 3.81 70.31 36 6.08 Yes 50 0.01 No 0 0 No -35 0.68 Yes 35 83.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 56815296 + NM_033280 SEC11C 1 0.36 2.24 59 5.29 84.91 14 4.9 No 33 -1.75 No 0 0 No -17 0.44 No 53 52.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 56815410 + NM_033280 SEC11C 1 0.36 2.25 58 8.24 81.12 26 6.24 Yes 13 0.85 Yes 0 0 No -25 0.88 Yes 45 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 56816756 + NM_033280 SEC11C 1 0.11 0.74 37 4.56 0 20 4.58 No 76 1.04 Yes 0 0 No -39 0.93 Yes 31 96.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 56818040 + NM_033280 SEC11C 1 0.02 0.15 9 10.56 85.28 30 5.39 No 57 0.1 No 0 0 No -23 0.81 Yes 47 64.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 56819773 + NM_033280 SEC11C 1 0.04 0.39 22 0.15 0 9 3.87 No 13 1.88 Yes 0 0 No -25 0.43 No 45 67.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 56822563 + NM_033280 SEC11C 1 0.09 0.97 39 5.87 87.49 17 5.62 Yes 4 1.48 Yes 0 0 No -22 0.5 No 48 73.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 56822900 + NM_033280 SEC11C 1 0.01 0.17 9 -3.18 70.87 45 7.62 Yes 32 1.07 Yes 24 0.87 Yes -32 0.52 No 26 70.64 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr18 56822921 + NM_033280 SEC11C 1 0.13 1.32 51 -3.6 78.27 27 4.76 No 53 1.08 Yes 0 0 No -26 0.84 Yes 44 76.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 10342829 - NM_001136232 SEC13 1 0.21 0.64 30 -9.88 83.78 22 5.1 No 40 0.6 No 0 0 No -22 0.86 Yes 48 76.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 10342832 - NM_001136232 SEC13 1 12.49 39.43 72 1.16 90.62 19 4.79 No 37 0.61 No 19 0.71 Yes -19 0.84 Yes 51 83.1 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 10342846 - NM_001136232 SEC13 1 0.09 0.31 19 4.15 79.16 12 4.58 No 23 0.6 No 19 0.71 Yes -21 0.4 No 48 28.54 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 10352986 - NM_001136232 SEC13 1 0.02 0.11 7 5.4 85.69 38 7.8 Yes 3 1.52 Yes 0 0 No -41 0.69 Yes 29 65.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 10355122 - NM_001136232 SEC13 1 0.14 0.54 27 10.21 91.94 17 5.52 No 4 1.18 Yes 20 0.78 Yes -20 0.88 Yes 50 89.78 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 10357155 - NM_001136232 SEC13 1 0.13 0.36 19 2.22 71.08 33 6 Yes 11 2.01 Yes 23 0.41 Yes -32 0.79 Yes 38 86.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 10357485 - NM_001136232 SEC13 1 0.25 0.72 34 3.81 79.71 24 5 No 11 0.65 No 0 0 No -23 0.66 No 47 72.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 10358683 - NM_001136232 SEC13 1 0.15 0.43 18 4.74 84.41 35 6.4 Yes 22 1.5 Yes 0 0 No -34 0.79 Yes 36 92.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 75187269 + NM_001144001 SEC14L1 1 0.45 0.9 44 0.91 0 11 4 No 25 1.07 Yes 33 0.81 Yes -40 0.9 Yes 30 85.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 75187295 + NM_001144001 SEC14L1 1 0.61 1.14 46 4.9 93.68 21 5.62 Yes 51 1.06 Yes 0 0 No -20 0.81 Yes 50 75.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 75192292 + NM_001144001 SEC14L1 1 0.06 0.13 7 -3.93 0 19 4.24 No 43 0.58 No 0 0 No -33 0.31 No 37 60.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 75197313 + NM_001144001 SEC14L1 1 0.13 0.28 14 8.67 87.94 43 6.23 Yes 44 -2.72 No 0 0 No -38 0.43 No 32 66.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 75200110 + NM_001144001 SEC14L1 1 0.65 0.99 41 8.59 87.86 28 5.38 No 15 1.15 Yes 0 0 No -27 0.91 Yes 43 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 75206971 + NM_001144001 SEC14L1 1 0.13 0.26 16 -1.02 60.45 35 7.54 Yes 22 0.33 No 0 0 No -34 0.34 No 30 40.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 75209512 + NM_001144001 SEC14L1 1 0.1 0.14 7 12.01 91.38 21 6.71 Yes NA NA NA 0 0 No -23 0.75 Yes 47 77.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 75210001 + NM_001144001 SEC14L1 1 0.11 0.15 11 -5.38 67.58 32 7.07 Yes 19 1.78 Yes 0 0 No -31 0.96 Yes 39 94.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139334810 - NM_001276418 SEC16A 1 0.2 0.19 10 7.81 76.73 31 5.33 No 32 -1.66 No 0 0 No -23 0.44 No 47 66.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139336691 - NM_001276418 SEC16A 1 1.52 1.32 48 -4.24 76.47 32 6.85 Yes 39 -0.54 No 0 0 No -31 0.68 Yes 39 73.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139339564 - NM_001276418 SEC16A 1 5.18 1.06 41 8.88 81.09 42 7.81 Yes 29 1.71 Yes 24 0.86 Yes -24 0.77 Yes 46 65.97 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 139340172 - NM_001276418 SEC16A 1 428.33 82.58 72 10.55 93.9 21 7.43 Yes 62 0.14 No 21 0.72 Yes -21 0.9 Yes 49 88.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 139341402 - NM_001276418 SEC16A 1 501.98 80.4 72 11.76 85.84 28 7.42 Yes 15 1 Yes 27 0.73 Yes -27 0.69 Yes 43 63.93 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 139341459 - NM_001276418 SEC16A 1 8.92 1.49 54 0.17 0 19 4.24 No 17 0.57 No 0 0 No -35 0.76 Yes 35 82.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139341814 - NM_001276418 SEC16A 1 0.82 0.68 33 7.44 86.11 33 7.11 Yes 20 1.36 Yes 0 0 No -27 0.72 Yes 38 72.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139345534 - NM_001276418 SEC16A 1 0.42 0.49 27 10.04 87.61 29 7.07 Yes 16 0.58 No 0 0 No -28 0.76 Yes 42 67.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 139350243 - NM_001276418 SEC16A 1 0.07 0.1 7 -11.37 79.5 30 5.39 No NA NA NA 0 0 No -29 0.5 No 43 59.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139350263 - NM_001276418 SEC16A 1 0.07 0.1 7 -0.41 0 23 5.2 No 65 -4.25 No 26 0.61 Yes -20 0.29 No 16 22.67 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 139356391 - NM_001276418 SEC16A 1 0.12 0.11 8 9.97 88.27 22 7.28 Yes 9 2 Yes 0 0 No -21 0.93 Yes 49 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139357893 - NM_001276418 SEC16A 1 0.47 0.61 27 9.47 84.55 39 6.39 Yes 74 -1.42 No 0 0 No -34 0.39 No 43 41.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 139358979 - NM_001276418 SEC16A 1 1.07 1.22 49 4.94 68.04 33 5 No 56 1.39 Yes 32 0.82 Yes -32 0.58 No 41 55.74 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 139360583 - NM_001276418 SEC16A 1 0.18 0.17 11 -5.51 0 9 3.87 No 22 0.69 No 0 0 No -34 0.87 Yes 36 86.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139360587 - NM_001276418 SEC16A 1 0.18 0.15 7 -9.58 78.73 31 8 Yes 18 0.7 No 0 0 No -30 0.91 Yes 40 87.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139360837 - NM_001276418 SEC16A 1 1.01 1.18 49 2.6 75.58 23 4.97 No 4 0.34 No 0 0 No -22 0.88 Yes 48 61.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 139364121 - NM_001276418 SEC16A 1 0.18 0.18 11 5.84 76.75 59 4.49 No 1 0.77 Yes 0 0 No -24 0.41 No 35 53.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 122923562 + NM_012430 SEC22A 1 0.45 0.24 13 10.07 87.03 32 5.5 No 45 -2.05 No 24 0.68 Yes -24 0.82 Yes 46 87.47 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 122935405 + NM_012430 SEC22A 1 0.21 0.17 12 8.01 89.32 63 8.89 Yes 9 0.53 No 0 0 No -28 0.61 No 42 60.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 122942490 + NM_012430 SEC22A 1 0.25 0.21 14 -4.51 68.66 36 7.77 Yes 23 0.62 No 35 0.38 Yes -35 0.7 Yes 35 78.7 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 122942496 + NM_012430 SEC22A 1 0.15 0.14 9 -2.51 0 9 3.87 No 29 0.59 No 0 0 No -41 0.71 Yes 29 76.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 122962658 + NM_012430 SEC22A 1 1.5 0.85 36 9.74 87.85 25 5.49 No 42 1.33 Yes 24 0.86 Yes -24 0.71 Yes 46 78.41 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 122963883 + NM_012430 SEC22A 1 1.16 0.56 26 8.98 91.9 35 6.04 Yes 18 0.46 No 0 0 No -30 0.73 Yes 40 85.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 122972241 + NM_012430 SEC22A 1 0.19 0.14 8 11.19 81.74 38 6.13 Yes 60 0.76 No 0 0 No -34 0.74 Yes 36 69.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 122983520 + NM_012430 SEC22A 1 0.79 0.38 19 4.71 84.17 24 5.2 No 11 1.03 Yes 0 0 No -23 0.66 Yes 13 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 42590150 - NM_032970 SEC22C 1 75.18 37.35 72 8.63 92.44 19 6.48 Yes 6 0.8 Yes 25 0.49 Yes -22 0.76 Yes 48 89.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 42590150 - NM_032970 SEC22C 1 1.89 0.78 32 8.63 92.44 19 6.48 Yes 6 0.8 Yes 25 0.49 Yes -22 0.76 Yes 48 89.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 42590150 - NM_032970 SEC22C 1 0.53 0.28 16 8.63 92.44 19 6.48 Yes 6 0.8 Yes 25 0.49 Yes -22 0.76 Yes 48 89.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 42602002 - NM_032970 SEC22C 1 0.46 0.47 24 8.38 85.65 64 7.85 Yes 51 1.59 Yes 0 0 No -51 0.54 No 19 69.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 42602785 - NM_032970 SEC22C 1 0.15 0.14 9 1.45 0 29 9.65 Yes 16 1.18 Yes 0 0 No -29 0.81 Yes 41 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 42605373 - NM_032970 SEC22C 1 0.21 0.18 10 -5.98 0 15 4.12 No 73 0.69 No 23 0.92 Yes -14 0.78 Yes 56 37.5 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 42605381 - NM_032970 SEC22C 1 2.37 1.92 54 0.54 69.41 24 4.71 No 65 0.69 No 23 0.92 Yes -20 0.68 Yes 47 72.37 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 42605473 - NM_032970 SEC22C 1 7.92 6.5 70 6.87 81.82 26 5.28 No 60 -5.23 No 25 0.75 Yes -25 0.82 Yes 45 74.39 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 42605502 - NM_032970 SEC22C 1 0.38 0.35 20 1.69 73.3 25 5.09 No 31 -4.57 No 25 0.75 Yes -24 0.71 Yes 46 76.63 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 42607376 - NM_032970 SEC22C 1 0.16 0.14 8 10.68 98.8 13 5.1 No 30 0.27 No 23 0.61 Yes -19 0.44 No 53 56.63 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 42608329 - NM_032970 SEC22C 1 0.71 0.61 35 8.8 87.72 20 5.56 Yes 7 1.14 Yes 19 0.62 Yes -28 0.44 No 51 74.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 39506813 - NM_006364 SEC23A 1 0.19 0.24 16 4.89 84.1 27 5.1 No 43 0.25 No 0 0 No -26 0.65 No 44 63.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 39516643 - NM_006364 SEC23A 1 1.14 1.89 60 1.91 85.15 24 5.1 No 11 0.81 Yes 23 0.88 Yes -24 0.84 Yes 46 75.97 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 39524449 - NM_006364 SEC23A 1 1.38 1.42 51 6.49 86.48 33 7.27 Yes 51 0.18 No 0 0 No -32 0.55 No 38 58.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 39545238 - NM_006364 SEC23A 1 0.28 0.38 18 4.59 83.36 65 8.29 Yes 64 1.08 Yes 0 0 No -21 0.83 Yes 49 77.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39560906 - NM_006364 SEC23A 1 0.13 0.21 13 3.79 0 17 4.55 No 61 1.49 Yes 0 0 No -44 0.54 No 26 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 18492872 + NM_001172745 SEC23B 1 0.17 0.43 26 4.57 0 24 4.97 No 72 0.58 No 0 0 No -26 0.91 Yes 44 83.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 18505130 + NM_001172745 SEC23B 1 0.13 0.38 22 -6.49 68.34 34 7.01 Yes 21 1.53 Yes 0 0 No -33 0.69 Yes 26 81.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 18509058 + NM_001172745 SEC23B 1 0.18 0.58 31 4.56 71.25 28 5.61 Yes 52 -3.47 No 0 0 No -27 0.62 No 43 63.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 18511325 + NM_001172745 SEC23B 1 0.04 0.1 7 1.46 83.17 34 7.72 Yes 21 1.59 Yes 0 0 No -27 0.86 Yes 43 80.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 18518084 + NM_001172745 SEC23B 1 0.03 0.11 7 7.7 85.1 19 3.52 No 1 0.51 No 0 0 No -24 0.42 No 49 49.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 18521124 + NM_001172745 SEC23B 1 0.07 0.18 9 9.87 84.64 28 5.48 No 15 0.14 No 0 0 No -27 0.71 Yes 43 92.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 18529253 + NM_001172745 SEC23B 1 0.03 0.1 7 -14.18 0 43 5.39 No 64 0.53 No 0 0 No -40 0.49 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 18529345 + NM_001172745 SEC23B 1 0.27 0.85 36 8.26 89.78 29 4.12 No 66 0.15 No 0 0 No -21 0.67 Yes 47 66.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 18531736 + NM_001172745 SEC23B 1 0.05 0.13 9 2.51 0 34 6.78 Yes 66 -1.86 No 0 0 No -28 0.49 No 42 59.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 18534950 + NM_001172745 SEC23B 1 0.08 0.24 13 3.38 0 16 4.58 No 41 -2.01 No 0 0 No -15 0.47 No 55 28.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 121657755 + NM_007190 SEC23IP 1 4.33 6.22 71 7.83 80.79 39 6.52 Yes 26 1.05 Yes 25 0.84 Yes -38 0.59 No 32 61.12 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 121657940 + NM_007190 SEC23IP 1 0.1 0.17 12 2.47 78.92 31 6.68 Yes 72 0.53 No 0 0 No -24 0.46 No 40 46.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 121663600 + NM_007190 SEC23IP 1 0.04 0.1 7 2.71 0 20 5.73 Yes 7 0.81 Yes 0 0 No -29 0.68 Yes 41 50.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 121671567 + NM_007190 SEC23IP 1 0.04 0.1 7 0.83 0 16 4.58 No 19 0.5 No 0 0 No -46 0.77 Yes 24 55.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 121677434 + NM_007190 SEC23IP 1 0.18 0.21 13 5.67 86.16 22 5.24 No 68 -1.4 No 0 0 No -19 0.53 No 51 44.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 121683953 + NM_007190 SEC23IP 1 0.07 0.14 10 2.96 84.41 21 5.65 Yes 8 1.07 Yes 0 0 No -20 0.58 No 50 70.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 121684473 + NM_007190 SEC23IP 1 0.36 0.72 36 8.21 86.24 19 5.48 No 6 1.16 Yes 0 0 No -18 0.63 No 52 82.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 121684475 + NM_007190 SEC23IP 1 0.47 0.93 37 2.04 82.75 21 5.66 Yes 8 1.15 Yes 0 0 No -20 0.75 Yes 50 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121692519 + NM_007190 SEC23IP 1 9.38 11 72 3.32 79.32 34 6.6 Yes 71 -4.62 No 0 0 No -33 0.59 No 37 63.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 121693173 + NM_007190 SEC23IP 1 0.06 0.11 8 4.4 73.49 24 4.31 No 1 1.34 Yes 27 0.88 Yes -23 0.86 Yes 47 84.33 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 121700115 + NM_007190 SEC23IP 1 0.19 0.26 16 6.49 88.01 21 5.03 No 33 1.21 Yes 0 0 No -49 0.68 Yes 21 82.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121700623 + NM_007190 SEC23IP 1 0.06 0.11 8 -0.41 77.14 27 5.15 No 14 0.78 Yes 0 0 No -26 0.6 No 44 66.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 133985326 + NM_021982 SEC24A 1 0.2 0.25 13 5.03 71.36 29 6.32 Yes 58 -1.9 No 0 0 No -23 0.61 No 43 59.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 134009179 + NM_021982 SEC24A 1 0.12 0.24 13 2.85 0 57 8.41 Yes 44 2.05 Yes 0 0 No -56 0.93 Yes 14 94.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 134010315 + NM_021982 SEC24A 1 0.58 1.25 49 -1.88 0 10 4.47 No 12 0.41 No 0 0 No -31 0.86 Yes 39 81.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 134010822 + NM_021982 SEC24A 1 0.08 0.14 10 3.9 77.69 23 5.16 No 10 0.62 No 0 0 No -22 0.9 Yes 48 91.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 134013730 + NM_021982 SEC24A 1 2.29 4.11 70 5.44 80.55 28 6.99 Yes 15 0.43 No 0 0 No -27 0.97 Yes 43 95.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 134013756 + NM_021982 SEC24A 1 0.19 0.33 19 5.42 86.93 32 5.73 Yes 41 0.44 No 0 0 No -53 0.52 No 17 81.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 134018096 + NM_021982 SEC24A 1 0.14 0.32 20 2.8 73.27 29 5.83 Yes 68 0.65 No 0 0 No -28 0.7 Yes 42 83.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 134027378 + NM_021982 SEC24A 1 0.05 0.14 9 6.58 80.12 21 7.21 Yes 8 1.84 Yes 0 0 No -20 0.85 Yes 50 92.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 134028720 + NM_021982 SEC24A 1 3.93 11.19 71 8.12 88.83 28 5.83 Yes -4 0.55 No 27 0.84 Yes -27 0.92 Yes 43 91.64 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 134044412 + NM_021982 SEC24A 1 0.14 0.31 17 2.27 0 13 4.36 No 15 1.25 Yes 0 0 No -56 0.41 No 14 64.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 134044480 + NM_021982 SEC24A 1 0.07 0.15 8 5.21 84.45 13 4.63 No 0 1.74 Yes 0 0 No -25 0.67 Yes 50 49.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 134045926 + NM_021982 SEC24A 1 0.2 0.39 18 4.62 0 34 7.78 Yes 21 1.16 Yes 0 0 No -33 0.62 No 36 67.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 134051617 + NM_021982 SEC24A 1 0.31 0.61 27 7.3 95.11 41 8.07 Yes 64 -2.6 No 0 0 No -40 0.52 No 30 47.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 110394165 + NM_001300813 SEC24B 1 0.43 0.49 28 6.29 0 9 3.87 No 75 -3.74 No 0 0 No -25 0.56 No 45 44.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 110421002 + NM_001300813 SEC24B 1 1.16 0.35 20 10.26 83.96 22 7.71 Yes 9 1.43 Yes 0 0 No -27 0.75 Yes 43 88.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 110421049 + NM_001300813 SEC24B 1 0.68 0.19 11 -3.12 65.45 13 3.69 No 56 1.39 Yes 0 0 No -12 0.4 No 58 58.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 110427483 + NM_001300813 SEC24B 1 198.04 58.4 72 6.92 84.01 44 6.35 Yes 31 0.17 No 36 0.59 Yes -43 0.78 Yes 27 76.66 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 110437723 + NM_001300813 SEC24B 1 0.2 0.26 14 8.26 84.53 16 4.24 No 54 1.29 Yes 0 0 No -27 0.83 Yes 43 77.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 110442687 + NM_001300813 SEC24B 1 0.28 0.29 17 8.3 82.04 19 5.18 No 18 -2.43 No 0 0 No -24 0.57 No 40 86.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 110452544 + NM_001300813 SEC24B 1 0.2 0.19 13 -1.63 0 80 8.75 Yes 67 0.77 Yes 0 0 No -29 0.41 No 36 70.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 75504938 + NM_004922 SEC24C 1 2.29 0.54 28 10.62 93.48 36 6.41 Yes 23 1.23 Yes 0 0 No -35 0.85 Yes 35 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 75511474 + NM_004922 SEC24C 1 1.04 2.46 62 11.77 98.06 50 7.81 Yes 37 0.78 Yes 31 0.64 Yes -30 0.69 Yes 21 69.17 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 75521855 + NM_004922 SEC24C 1 5.94 15.01 72 -1.59 53.92 72 9.05 Yes 59 1.66 Yes 23 0.73 Yes -23 0.39 No 47 35.27 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 75523253 + NM_004922 SEC24C 1 0.11 0.26 16 0.93 0 15 3.86 No 41 1.58 Yes 0 0 No -27 0.61 No 17 67.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75523459 + NM_004922 SEC24C 1 0.03 0.1 7 11.23 85.86 46 7.52 Yes 33 0.6 No 0 0 No -45 0.93 Yes 25 93.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 75525292 + NM_004922 SEC24C 1 0.47 0.96 41 8.29 82.32 27 5.66 Yes 74 -1.98 No 0 0 No -27 0.86 Yes 43 73.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 75526162 + NM_004922 SEC24C 1 0.13 0.25 13 3.28 66.61 35 5.64 Yes 62 0.5 No 0 0 No -34 0.86 Yes 36 64.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 75529137 + NM_004922 SEC24C 1 0.11 0.31 19 -2.71 0 21 4.69 No 47 0.6 No 0 0 No -20 0.56 No 50 72.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 119648683 - NM_001318066 SEC24D 1 0.11 0.18 9 5.13 80.48 21 4.97 No 1 1.24 Yes 0 0 No -21 0.45 No 50 57.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 119649192 - NM_001318066 SEC24D 1 0.29 0.54 25 5.67 77.93 20 5.83 Yes 7 0.97 Yes 0 0 No -19 0.85 Yes 51 96.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 119657725 - NM_001318066 SEC24D 1 0.3 0.69 29 6.9 86.05 27 6.54 Yes 14 1.01 Yes 26 0.95 Yes -26 0.93 Yes 44 94.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 119678998 - NM_001318066 SEC24D 1 0.23 0.47 24 1.11 76.86 61 5.51 No 11 0.93 Yes 0 0 No -37 0.74 Yes 33 85.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 119679000 - NM_001318066 SEC24D 1 0.07 0.14 8 -12.27 0 59 5.43 No 9 0.93 Yes 0 0 No -35 0.73 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 119681763 - NM_001318066 SEC24D 1 0.15 0.32 20 2.81 82.79 34 6 Yes 75 0.54 No 33 0.33 Yes -33 0.9 Yes 37 93.66 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 119681766 - NM_001318066 SEC24D 1 0.22 0.49 24 4.52 76.69 31 5.74 Yes 72 0.55 No 33 0.33 Yes -30 0.91 Yes 40 94.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 119687979 - NM_001318066 SEC24D 1 1.03 2.33 64 8.13 77.98 25 6.49 Yes 12 0.97 Yes 24 0.84 Yes -24 0.76 Yes 46 76.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 119736311 - NM_001318066 SEC24D 1 364.28 125.03 72 5.35 90.13 34 5.97 Yes 21 0.22 No 24 0.79 Yes -27 0.86 Yes 43 89.09 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 119738006 - NM_001318066 SEC24D 1 0.12 0.15 7 6.33 70.7 27 4.86 No 22 0.91 Yes 26 0.95 Yes -26 0.93 Yes 44 97.18 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 119738488 - NM_001318066 SEC24D 1 0.2 0.26 13 8.98 93.86 42 8.09 Yes 29 0.47 No 0 0 No -26 0.7 Yes 44 78.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 83747319 - NM_001318120 SEC31A 1 0.03 0.14 7 4.21 84.1 24 5.18 No 11 0.99 Yes 0 0 No -23 0.9 Yes 47 93.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 83752129 - NM_001318120 SEC31A 1 2.27 4.06 70 8.8 91.62 22 5.59 Yes 9 0.59 No 25 0.66 Yes -21 0.43 No 49 44.27 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 83762958 - NM_001318120 SEC31A 1 0.05 0.1 7 5.24 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.7 Yes 51 80.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 83763495 - NM_001318120 SEC31A 1 0.07 0.13 8 4.61 72.8 42 8.99 Yes 29 2.08 Yes 0 0 No -32 0.42 No 38 57.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 83764601 - NM_001318120 SEC31A 1 0.34 0.64 32 6.04 76.37 18 5.76 Yes 5 0.61 No 0 0 No -23 0.69 Yes 47 58.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 83766447 - NM_001318120 SEC31A 1 4.05 12 72 9.07 92.02 80 11.48 Yes 38 1.51 Yes 25 0.76 Yes -25 0.59 No 45 58.97 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 83770157 - NM_001318120 SEC31A 1 0.15 0.67 30 4.37 73.87 36 6.44 Yes 70 -5.69 No 31 0.86 Yes -35 0.79 Yes 35 86.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 83783806 - NM_001318120 SEC31A 1 0.07 0.13 8 4.68 77.78 25 5.56 Yes 38 0.34 No 0 0 No -25 0.61 No 45 76.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 83799963 - NM_001318120 SEC31A 1 0.08 0.25 15 6.28 71.71 43 7.51 Yes -3 0.07 No 0 0 No -28 0.5 No 42 53.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 83801865 - NM_001318120 SEC31A 1 0.1 0.31 16 3.58 70.3 52 6.44 Yes 15 1.05 Yes 27 0.87 Yes -27 0.72 Yes 43 82.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 102255327 - NM_015490 SEC31B 1 5.32 0.42 22 6.22 82.49 43 6.29 Yes 30 0.94 Yes 29 0.93 Yes -23 0.86 Yes 47 79.94 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 102257247 - NM_015490 SEC31B 1 0.88 0.13 7 6.8 83.58 24 5.29 No 74 -3.23 No 0 0 No -21 0.82 Yes 49 81.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 102259917 - NM_015490 SEC31B 1 78.51 4.9 71 4.63 88.65 22 4.69 No 9 0.74 No 21 0.87 Yes -22 0.68 Yes 49 77.57 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 102261468 - NM_015490 SEC31B 1 7.26 0.47 27 2.51 81.44 25 4.96 No 30 0.15 No 24 0.82 Yes -24 0.74 Yes 46 72.82 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 102267806 - NM_015490 SEC31B 1 123.07 9.24 72 5.1 82.94 40 6.55 Yes 27 0.98 Yes 26 0.88 Yes -29 0.68 Yes 31 89.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 127779887 + NM_013336 SEC61A1 1 0.25 1.81 55 6.88 79.96 75 6.03 Yes 25 1.29 Yes 0 0 No -28 0.91 Yes 42 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127783863 + NM_013336 SEC61A1 1 0.03 0.17 9 8.95 90.8 26 5.64 Yes 13 1.15 Yes 25 0.94 Yes -25 0.95 Yes 45 96.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 127785769 + NM_013336 SEC61A1 1 0.03 0.28 12 -15.02 0 17 4.24 No -1 -0.99 No 30 0.64 Yes -55 0.43 No 15 30.81 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 127786787 + NM_013336 SEC61A1 1 0.03 0.14 9 7.73 89.56 33 5.88 Yes 27 0.44 No 27 0.83 Yes -29 0.55 No 44 62.44 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 127789055 + NM_013336 SEC61A1 1 0.02 0.15 10 4.9 75.68 31 6.08 Yes 18 0.98 Yes 0 0 No -30 0.68 Yes 40 82.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12191649 + NM_001142628 SEC61A2 1 0.47 0.13 7 4.72 81.19 49 6.76 Yes 36 0.22 No 0 0 No -21 0.63 No 49 70.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 101986231 + NM_006808 SEC61B 1 0.12 0.88 41 5.88 77.72 29 6.24 Yes 16 1.46 Yes 0 0 No -28 0.36 No 42 79.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 101986270 + NM_006808 SEC61B 1 0.02 0.19 12 5.67 92.27 19 4.8 No 55 1.43 Yes 0 0 No -18 0.74 Yes 52 86.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 101986373 + NM_006808 SEC61B 1 0.2 1.78 51 3.96 74.03 18 4.9 No 64 -1.82 No 0 0 No -21 0.53 No 53 48.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 101992590 + NM_006808 SEC61B 1 0.02 0.28 10 -1.98 68.42 22 5.1 No 52 1.02 Yes 26 0.84 Yes -21 0.91 Yes 49 90.6 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 54823567 - NM_001012456 SEC61G 1 0.02 0.11 7 -2.78 0 16 4.09 No 63 1.39 Yes 0 0 No -15 0.44 No 35 46.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 54823618 - NM_001012456 SEC61G 1 0.28 1.89 56 9.17 82.48 25 5.39 No 12 1.44 Yes 22 0.48 Yes -24 0.72 Yes 46 95.46 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 54824319 - NM_001012456 SEC61G 1 0.01 0.1 7 2.71 84.79 15 3.79 No 2 1.51 Yes 0 0 No -26 0.87 Yes 44 90.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 54825284 - NM_001012456 SEC61G 1 1.5 0.74 33 -1.03 0 28 5.83 Yes 71 0.71 No 0 0 No -31 0.78 Yes 39 73.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 169686172 + NM_003262 SEC62 1 0.55 1.32 50 5.21 78.81 28 4.12 No 40 0.33 No 27 0.86 Yes -27 0.87 Yes 43 88.33 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 169687074 + NM_003262 SEC62 1 0.31 0.85 36 5.68 84.74 25 6 Yes 12 1.14 Yes 24 0.93 Yes -24 0.84 Yes 46 91.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 169693399 + NM_003262 SEC62 1 0.13 0.35 19 -5.46 0 27 6.23 Yes 59 0.33 No 0 0 No -26 0.52 No 44 54.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 169700424 + NM_003262 SEC62 1 0.17 0.9 36 8.39 95.77 32 7.9 Yes 19 1.64 Yes 31 0.86 Yes -31 0.8 Yes 39 87.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 169700447 + NM_003262 SEC62 1 0.28 1.5 50 8.5 92.68 18 5.56 Yes 42 1.64 Yes 25 0.76 Yes -25 0.74 Yes 45 89.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 169701295 + NM_003262 SEC62 1 0.03 0.1 7 6.97 90.75 17 5.57 Yes 4 0.32 No 0 0 No -29 0.68 Yes 41 57.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 169702864 + NM_003262 SEC62 1 0.3 1.32 50 9.38 94.23 23 4.49 No 6 0.86 Yes 0 0 No -26 0.51 No 44 54.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 169703594 + NM_003262 SEC62 1 0.08 0.39 22 -19.36 0 30 5.36 No 0 0.59 No 0 0 No -26 0.71 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 169710487 + NM_003262 SEC62 1 0.02 0.11 7 6.19 88.27 26 6.84 Yes 13 1.48 Yes 0 0 No -32 0.5 No 45 72.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 108194113 - NM_007214 SEC63 1 0.2 0.32 19 0.91 0 19 5.64 Yes 6 1.31 Yes 0 0 No -25 0.77 Yes 45 82.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 108206686 - NM_007214 SEC63 1 0.26 0.32 20 6.79 89.22 31 8.44 Yes 2 1.37 Yes 0 0 No -30 0.62 No 40 84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 108206689 - NM_007214 SEC63 1 0.69 1 41 5.16 86.28 28 8.27 Yes -1 1.37 Yes 0 0 No -27 0.54 No 43 81.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 108214857 - NM_007214 SEC63 1 2.05 3 66 4.15 78.11 35 4.5 No 36 0.34 No 0 0 No -30 0.69 Yes 40 88.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 108220914 - NM_007214 SEC63 1 0.14 0.25 16 2.88 0 50 7.34 Yes 37 0.97 Yes 0 0 No -42 0.46 No 26 68.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 108224199 - NM_007214 SEC63 1 3.12 5.13 71 -0.59 0 38 6.63 Yes 41 0.48 No 0 0 No -37 0.77 Yes 33 83.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 108225945 - NM_007214 SEC63 1 0.21 0.36 21 7.58 84.68 29 5.97 Yes -1 0.63 No 21 0.71 Yes -29 0.53 No 41 75.4 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 108229784 - NM_007214 SEC63 1 0.25 0.43 20 4.21 72.27 32 6.19 Yes 71 1.55 Yes 0 0 No -27 0.83 Yes 43 84.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 108240635 - NM_007214 SEC63 1 0.3 0.49 22 2.57 69.62 52 5.26 No 65 1.38 Yes 0 0 No -25 0.49 No 29 52.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 108242284 - NM_007214 SEC63 1 0.29 0.44 26 10.85 87.82 26 5.96 Yes 65 0.14 No 0 0 No -25 0.87 Yes 45 92.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 108277311 - NM_007214 SEC63 1 2.07 2.08 57 8.65 82.38 27 5.62 Yes 59 0.54 No 27 0.77 Yes -27 0.77 Yes 43 60.83 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr9 91940345 + NM_001282690 SECISBP2 1 0.69 0.39 22 0.36 0 26 5.51 No 13 0.74 No 0 0 No -25 0.69 Yes 45 68.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 91940462 + NM_001282690 SECISBP2 1 23.71 12.83 72 5.8 80.53 49 7.72 Yes 36 0.95 Yes 20 0.57 Yes -41 0.69 Yes 29 81.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 91940814 + NM_001282690 SECISBP2 1 1.31 1.31 53 -1.26 75.72 30 5.56 Yes 4 0.63 No 0 0 No -29 0.87 Yes 41 84.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 91947443 + NM_001282690 SECISBP2 1 0.16 0.14 10 10.22 86.81 28 6.71 Yes 15 2.01 Yes 0 0 No -27 0.9 Yes 43 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 91948939 + NM_001282690 SECISBP2 1 2.57 1.03 40 7.37 79.35 30 5.83 Yes 43 1.69 Yes 29 0.9 Yes -29 0.9 Yes 41 94.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 91949193 + NM_001282690 SECISBP2 1 0.34 0.15 10 8.24 84.01 61 7.11 Yes 76 1.14 Yes 0 0 No -35 0.35 No 31 63.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 91949474 + NM_001282690 SECISBP2 1 2.89 1.11 44 6.11 81.12 35 5.79 Yes 22 -2.72 No 0 0 No -22 0.61 No 49 58.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 91949550 + NM_001282690 SECISBP2 1 81.14 32.97 72 0.1 80.57 26 3.45 No 33 0.57 No 20 0.89 Yes -20 0.73 Yes 50 84.34 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 91949553 + NM_001282690 SECISBP2 1 33.69 13.58 72 4.77 82.71 29 3.66 No 36 0.57 No 0 0 No -23 0.85 Yes 47 82.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 91958812 + NM_001282690 SECISBP2 1 0.21 0.15 9 10.28 89.69 22 6.8 Yes 55 0.53 No 0 0 No -21 0.59 No 46 64.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 91969700 + NM_001282690 SECISBP2 1 1.15 0.9 37 5.5 70.05 15 5.29 No -3 0.12 No 0 0 No -23 0.87 Yes 47 94.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 91970027 + NM_001282690 SECISBP2 1 0.19 0.15 9 8.11 72.78 18 5.63 Yes 5 0.75 No 0 0 No -25 0.71 Yes 45 55.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 91972919 + NM_001282690 SECISBP2 1 0.74 0.5 25 -5.9 0 9 2.91 No 7 1.28 Yes 0 0 No -33 0.75 Yes 37 88.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 49318962 - NM_001193489 SECISBP2L 1 0.21 0.18 10 13 94.18 32 6.48 Yes 66 1.23 Yes 0 0 No -31 0.66 Yes 39 70.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 49325292 - NM_001193489 SECISBP2L 1 1.04 0.78 35 -2.1 0 13 3.83 No 38 0.71 No 0 0 No -50 0.67 Yes 23 73.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 49327654 - NM_001193489 SECISBP2L 1 0.99 0.76 37 6.61 82.4 49 6.8 Yes 23 0.26 No 24 0.54 Yes -24 0.52 No 46 61.39 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 12949041 + NM_031216 SEH1L 1 0.18 0.24 14 8.82 83.82 28 7.68 Yes 15 1.86 Yes 0 0 No -27 0.93 Yes 43 96.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 12955463 + NM_031216 SEH1L 1 0.09 0.15 9 -10.06 0 44 6.65 Yes 31 0.81 Yes 0 0 No -43 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 12963460 + NM_031216 SEH1L 1 0.17 0.38 18 6.5 84.19 28 6.2 Yes 15 0.65 No 0 0 No -27 0.88 Yes 43 95.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 12964434 + NM_031216 SEH1L 1 0.92 3.1 63 4.26 77.67 66 8.75 Yes 76 0.47 No 44 0.59 Yes -44 0.42 No 34 51.68 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 12975731 + NM_031216 SEH1L 1 0.28 0.76 35 7.53 89.52 24 5.2 No 58 1.4 Yes 23 0.96 Yes -23 0.87 Yes 47 95.49 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 12984137 + NM_031216 SEH1L 1 0.08 0.24 11 7.87 76.8 15 5.22 No 2 0.28 No 0 0 No -27 0.95 Yes 43 90.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 12985305 + NM_031216 SEH1L 1 0.6 1.64 54 6.08 80.65 45 6 Yes 23 1.42 Yes 0 0 No -35 0.62 No 35 63.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 12986860 + NM_031216 SEH1L 1 0.43 1.21 44 11.09 93.23 82 11.18 Yes 69 0.83 Yes 30 0.04 Yes -19 0.15 No 41 15.55 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 81942523 - NM_005065 SEL1L 1 0.07 0.24 14 5.45 83.7 28 6.82 Yes 42 2.03 Yes 0 0 No -28 0.56 No 42 60.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 81950635 - NM_005065 SEL1L 1 0.05 0.17 11 4.18 75.77 39 4.51 No 8 0.73 No 0 0 No -23 0.86 Yes 47 67.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 81950679 - NM_005065 SEL1L 1 0.12 0.43 22 2.71 63.34 43 6.48 Yes 64 0.74 No 0 0 No -30 0.46 No 40 66.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 81950766 - NM_005065 SEL1L 1 0.09 0.31 20 5.94 85.69 33 6.27 Yes 20 0.64 No 32 0.59 Yes -32 0.59 No 48 49.96 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 81958891 - NM_005065 SEL1L 1 0.07 0.18 11 -12.85 80.52 31 7.31 Yes 18 0.81 Yes 0 0 No -30 0.79 Yes 40 84.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 81959259 - NM_005065 SEL1L 1 0.14 0.35 20 8.46 93.94 20 5.1 No 76 0.11 No 0 0 No -25 0.57 No 51 79.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 81972523 - NM_005065 SEL1L 1 3.4 9.86 72 11.14 86.09 22 6.08 Yes 58 0.13 No 30 0.33 Yes -21 0.58 No 49 81.76 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 81993197 - NM_005065 SEL1L 1 0.41 0.79 38 0.38 75.8 22 4.89 No 9 0.29 No 0 0 No -21 0.88 Yes 49 78.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 81994876 - NM_005065 SEL1L 1 0.2 0.36 21 -2.09 0 37 5.54 No 63 -2.51 No 0 0 No -29 0.72 Yes 41 55.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 25752603 - NM_015187 SEL1L3 1 0.3 0.18 12 7.36 77.82 33 5.67 Yes 0 -1.73 No 0 0 No -32 0.84 Yes 38 93.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 25757747 - NM_015187 SEL1L3 1 0.26 0.11 7 4.51 86.38 14 5.2 No 73 -4.14 No 0 0 No -20 0.82 Yes 50 79.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 25757750 - NM_015187 SEL1L3 1 0.29 0.29 15 5.18 83.75 11 4.9 No 70 -4.14 No 0 0 No -17 0.69 Yes 53 73.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 25759534 - NM_015187 SEL1L3 1 0.23 0.32 17 7.68 83.1 44 7.95 Yes -1 1.13 Yes 0 0 No -26 0.87 Yes 44 92.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25789429 - NM_015187 SEL1L3 1 0.12 0.14 8 1.23 74.35 18 4.2 No 14 0.72 No 0 0 No -26 0.69 Yes 44 58.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 25792177 - NM_015187 SEL1L3 1 0.39 0.29 16 -1.05 56.91 23 5.39 No 10 -0.98 No 0 0 No -22 0.42 No 16 9.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 25835149 - NM_015187 SEL1L3 1 0.41 0.39 22 1.7 76.04 40 6.25 Yes 41 1.13 Yes 0 0 No -31 0.9 Yes 39 83.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25849138 - NM_015187 SEL1L3 1 0.25 0.13 8 7.78 85.97 29 5.57 Yes 55 -1.81 No 0 0 No -28 0.92 Yes 42 95.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 87332531 - NM_004261 SELENOF 1 0.22 1.38 49 5.21 81.72 27 4.76 No 14 0.25 No 0 0 No -26 0.6 No 44 66.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 87332534 - NM_004261 SELENOF 1 0.03 0.18 10 4.35 72.71 24 4.57 No 11 0.26 No 0 0 No -23 0.63 No 47 69.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 87333776 - NM_004261 SELENOF 1 0.12 0.75 36 -1.09 0 13 3.29 No 22 1.43 Yes 0 0 No -34 0.41 No 32 64.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 87335759 - NM_004261 SELENOF 1 0.02 0.14 9 7.82 87.56 26 5.36 No 13 0.44 No 0 0 No -25 0.78 Yes 45 80.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 87344356 - NM_004261 SELENOF 1 0.25 1.35 27 2.75 0 32 6.91 Yes 41 2.31 Yes 0 0 No -31 0.81 Yes 39 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 87352880 - NM_004261 SELENOF 1 1.75 7.6 72 7.02 77.47 30 5.14 No 11 1.74 Yes 23 0.8 Yes -30 0.58 No 41 65.7 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 87365922 - NM_004261 SELENOF 1 0.06 0.25 13 3.82 80.01 32 6.85 Yes 61 -2.73 No 0 0 No -31 0.87 Yes 39 79.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 87366170 - NM_004261 SELENOF 1 0.03 0.17 9 4.84 87 35 8.31 Yes 22 1.34 Yes 0 0 No -34 0.79 Yes 36 87.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 87376360 - NM_004261 SELENOF 1 0.07 0.19 11 4.64 87.81 26 5.1 No 38 1.47 Yes 0 0 No -25 0.61 No 20 72.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 57509286 + NM_170746 SELENOH 1 0.02 0.14 9 0.43 0 9 3.87 No 14 2.34 Yes 0 0 No -26 0.9 Yes 44 84.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 57509579 + NM_170746 SELENOH 1 0.05 0.24 15 -1.56 0 17 5.66 Yes 4 1.39 Yes 25 0.87 Yes -17 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 26595775 + NM_033505 SELENOI 1 0.27 0.21 12 6.69 74.24 34 6.61 Yes 21 0.99 Yes 0 0 No -33 0.66 Yes 37 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 26607918 + NM_033505 SELENOI 1 0.37 0.5 27 8 89.78 52 6.78 Yes 23 0.56 No 0 0 No -26 0.55 No 35 59.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 26607829 + NM_033505 SELENOI 1 0.8 1.06 40 2.2 80.71 37 7.71 Yes 24 1.08 Yes 0 0 No -27 0.26 No 34 37.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 26607918 + NM_033505 SELENOI 1 1.47 1.93 54 8 89.78 52 6.78 Yes 23 0.56 No 0 0 No -26 0.55 No 35 59.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53919932 - NM_021237 SELENOK 1 0.18 0.68 35 -0.7 0 14 4.12 No 13 1.84 Yes 18 0.42 Yes -25 0.74 Yes 45 86.06 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 53920961 - NM_021237 SELENOK 1 0.08 0.28 17 -9.57 0 34 6.63 Yes 21 1.15 Yes 0 0 No -33 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 53925088 - NM_021237 SELENOK 1 0.08 0.19 13 8.05 83.88 13 5 No 22 -1.52 No 22 0.7 Yes -22 0.25 No 51 35.94 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 31502102 - NM_080430 SELENOM 1 1.85 0.38 20 4.97 78.65 18 3.28 No 31 1.12 Yes 24 0.72 Yes -24 0.66 No 46 73.73 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 50640314 + NM_031454 SELENOO 1 1.74 0.24 16 8.28 85.08 22 5.59 Yes 3 2.32 Yes 0 0 No -21 0.84 Yes 49 85.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50643347 + NM_031454 SELENOO 1 9.93 1.57 52 1.63 79.37 14 5.57 Yes 76 -3.85 No 0 0 No -28 0.72 Yes 42 61.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50644749 + NM_031454 SELENOO 1 6 0.86 37 3.79 0 25 5.9 Yes 36 1.5 Yes 0 0 No -24 0.64 No 46 78.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 50646916 + NM_031454 SELENOO 1 2.07 0.56 26 5.62 83.24 31 5.99 Yes 57 0.22 No 31 0.54 Yes -31 0.72 Yes 39 70.96 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 50649027 + NM_031454 SELENOO 1 0.38 0.24 14 4.91 84.89 24 6.63 Yes NA NA NA 30 0.33 Yes -26 0.81 Yes 44 75.61 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 50650896 + NM_031454 SELENOO 1 3.73 1.71 59 5.82 81.59 19 5.74 Yes 26 0.22 No 0 0 No -29 0.59 No 41 60.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50651054 + NM_031454 SELENOO 1 0.5 0.21 12 10.58 83.23 28 5.57 Yes 15 1.02 Yes 0 0 No -24 0.84 Yes 46 84.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50654121 + NM_031454 SELENOO 1 0.34 0.14 8 9.27 87.66 32 5.74 Yes NA NA NA 26 0.22 Yes -28 0.45 No 48 42.5 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 50655123 + NM_031454 SELENOO 1 0.65 0.32 20 2.3 0 34 5.51 No 28 -0.17 No 0 0 No -24 0.69 Yes 46 69.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50655381 + NM_031454 SELENOO 1 0.69 0.22 12 1.71 75.25 20 5.1 No 61 0.38 No 26 0.81 Yes -19 0.72 Yes 51 41.43 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 150336495 + NM_016275 SELENOT 1 0.49 1.97 61 9.81 87.82 22 7.28 Yes 9 1.4 Yes 21 0.77 Yes -21 0.85 Yes 49 85.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 150343677 + NM_016275 SELENOT 1 0.11 0.78 39 3.97 84.41 23 7.66 Yes 10 1.66 Yes 0 0 No -29 0.7 Yes 41 75.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 169662134 - NM_000655 SELL 1 0.12 0.5 25 5.57 81.41 108 9.74 Yes 35 1.5 Yes 0 0 No -30 0.68 Yes 40 67.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 169663766 - NM_000655 SELL 1 0.09 0.35 19 8.81 78.75 25 6.43 Yes 9 0.91 Yes 0 0 No -24 0.79 Yes 49 52.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 169668737 - NM_000655 SELL 1 0.05 0.15 8 -2.58 80.87 19 5.52 No 6 1.26 Yes 0 0 No -26 0.63 No 44 70.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 169670828 - NM_000655 SELL 1 0.05 0.15 10 -14.71 0 16 7.33 Yes 3 1.21 Yes 0 0 No -33 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 169670829 - NM_000655 SELL 1 0.08 0.15 10 -8.27 0 15 7.27 Yes 2 1.22 Yes 0 0 No -32 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 169673236 - NM_000655 SELL 1 0.18 0.75 36 5.09 71.18 33 6.93 Yes 20 0.39 No 26 0.76 Yes -38 0.85 Yes 32 81.84 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 169678383 - NM_000655 SELL 1 0.04 0.17 11 11.31 84.1 47 4.22 No 24 0.72 No 0 0 No -36 0.69 Yes 34 80.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 96318277 - NM_006304 SEM1 1 0.25 1.9 59 2.66 80.71 26 6 Yes 13 1.28 Yes 0 0 No -25 0.88 Yes 45 80.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 96318304 - NM_006304 SEM1 1 0.18 1.42 50 -4.57 0 13 3.2 No 48 0.67 No 23 0.72 Yes -60 0.78 Yes 10 33.3 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 96325150 - NM_006304 SEM1 1 0.02 0.18 13 10.34 90.3 24 7.18 Yes 11 0.8 Yes 0 0 No -23 0.84 Yes 47 86.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 96337527 - NM_006304 SEM1 1 0.08 0.63 32 6.37 80.92 14 4.8 No 21 1.12 Yes 21 0.62 Yes -21 0.56 No 49 69.75 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 156132738 + NM_001193302 SEMA4A 1 0.26 0.39 23 5.6 0 28 5.58 Yes 64 -2.16 No 0 0 No -32 0.6 No 38 67.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 156142643 + NM_001193302 SEMA4A 1 0.09 0.21 12 4.36 75.65 23 5.33 No 37 1.38 Yes 0 0 No -22 0.73 Yes 48 71.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156144618 + NM_001193302 SEMA4A 1 0.13 0.17 12 2.28 0 11 3.87 No 21 0.91 Yes 0 0 No -29 0.73 Yes 37 71.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 97527629 - NM_017789 SEMA4C 1 0.36 0.14 10 0.88 77.17 35 9.95 Yes NA NA NA 0 0 No -34 0.67 Yes 36 78.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 97529140 - NM_017789 SEMA4C 1 1.85 0.5 27 9.08 90.49 23 5.72 Yes 58 -3.07 No 0 0 No -23 0.76 Yes 47 82.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 97530768 - NM_017789 SEMA4C 1 0.4 0.14 9 6.77 94.93 23 3.55 No 67 0.36 No 0 0 No -20 0.49 No 50 68.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 97532154 - NM_017789 SEMA4C 1 1.22 0.22 16 -4.8 60.42 19 4.69 No 58 -0.59 No 0 0 No -38 0.65 No 32 57.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 92001021 - NM_001142287 SEMA4D 1 2.09 2.17 60 3.2 0 15 3.72 No 72 -1.64 No 0 0 No -18 0.89 Yes 52 85.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 92004007 - NM_001142287 SEMA4D 1 0.42 0.67 31 6.8 86.67 21 4.69 No 8 1.76 Yes 0 0 No -20 0.94 Yes 50 94.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 92011747 - NM_001142287 SEMA4D 1 0.23 0.38 21 2.44 0 29 7.81 Yes 16 1.55 Yes 0 0 No -28 0.9 Yes 42 95.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 92017930 - NM_001142287 SEMA4D 1 0.12 0.17 11 -5.09 71.75 62 8.36 Yes 12 2.31 Yes 0 0 No -24 0.81 Yes 46 68.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 92018978 - NM_001142287 SEMA4D 1 0.1 0.17 8 4.23 87.26 20 4.69 No 42 0.87 Yes 0 0 No -19 0.85 Yes 51 85.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 92019989 - NM_001142287 SEMA4D 1 0.08 0.11 7 -0.96 68.02 21 5.2 No 56 -0.73 No 0 0 No -20 0.62 No 50 73.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 92022060 - NM_001142287 SEMA4D 1 0.09 0.11 7 0.41 63.6 19 5.38 No 6 0.94 Yes 0 0 No -18 0.61 No 52 54.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 92034805 - NM_001142287 SEMA4D 1 1.84 0.47 24 7.42 91.83 27 5.2 No 75 0.44 No 0 0 No -26 0.81 Yes 22 68.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 92051616 - NM_001142287 SEMA4D 1 0.63 0.18 8 8.75 83.59 27 5.39 No 14 0.95 Yes 0 0 No -26 0.88 Yes 44 89.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 92056338 - NM_001142287 SEMA4D 1 1.02 0.26 17 8.27 85.73 35 6.9 Yes 43 0.3 No 0 0 No -23 0.68 Yes 47 69.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 115904114 - NM_001300780 SEMA6A 1 4.76 0.57 21 5.85 79.49 30 7.07 Yes 17 1.77 Yes 0 0 No -29 0.82 Yes 41 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 74703322 - NM_001146029 SEMA7A 1 0.03 0.11 8 -0.81 0 33 7.55 Yes 20 1.48 Yes 0 0 No -32 0.96 Yes 38 96.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74704350 - NM_001146029 SEMA7A 1 0.07 0.22 13 -1.24 0 27 7.28 Yes 14 2.33 Yes 0 0 No -26 0.78 Yes 44 61.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 74704417 - NM_001146029 SEMA7A 1 0.05 0.15 8 6 71.04 25 5.77 Yes 30 1.66 Yes 0 0 No -24 0.76 Yes 46 74.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74705927 - NM_001146029 SEMA7A 1 0.08 0.25 12 0.8 71.06 73 9.69 Yes 60 1.68 Yes 0 0 No -35 0.65 No 24 83.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 74705930 - NM_001146029 SEMA7A 1 0.08 0.24 12 4.52 82.54 70 9.54 Yes 57 1.69 Yes 0 0 No -32 0.68 Yes 27 84.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74706081 - NM_001146029 SEMA7A 1 0.07 0.21 11 6.12 77.86 68 7.26 Yes -3 0.89 Yes 0 0 No -35 0.81 Yes 35 82.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74707045 - NM_001146029 SEMA7A 1 0.04 0.19 8 -2.89 0 16 4.24 No 55 2 Yes 0 0 No -15 0.67 Yes 55 44.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 74707077 - NM_001146029 SEMA7A 1 0.1 0.5 26 2.17 0 13 4.36 No 23 2.04 Yes 0 0 No -35 0.91 Yes 35 93.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74710651 - NM_001146029 SEMA7A 1 6873.97 426.67 72 12.36 87.8 22 6.2 Yes 9 1.86 Yes 21 0.88 Yes -21 0.73 Yes 49 90.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 74710651 - NM_001146029 SEMA7A 1 12.35 0.9 32 12.36 87.8 22 6.2 Yes 9 1.86 Yes 21 0.88 Yes -21 0.73 Yes 49 90.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 48451312 - NR_051992 SENP1 1 0.3 0.29 18 4.9 81.14 34 6.92 Yes 21 0.31 No 0 0 No -23 0.33 No 47 32.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 48459017 - NR_051992 SENP1 1 0.17 0.19 12 4.46 73.87 31 5.89 Yes 63 0.49 No 22 0.94 Yes -30 0.42 No 40 71.69 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 48463903 - NR_051992 SENP1 1 0.14 0.13 9 9.34 90.76 21 4.9 No 68 1.18 Yes 0 0 No -20 0.72 Yes 50 86.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 48467406 - NR_051992 SENP1 1 0.16 0.19 13 8.5 89.03 31 7.72 Yes 18 1.57 Yes 0 0 No -30 0.83 Yes 40 91.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 48474284 - NR_051992 SENP1 1 0.25 0.26 15 7.15 84.68 33 6.7 Yes 14 0.74 No 26 0.78 Yes -32 0.8 Yes 38 81.53 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 185316181 + NM_021627 SENP2 1 0.16 0.15 9 6.97 90.14 19 4.29 No 3 0.21 No 24 0.5 Yes -30 0.57 No 46 44.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 185316267 + NM_021627 SENP2 1 0.27 0.22 16 6.28 82.31 20 5.57 Yes 67 0.82 Yes 0 0 No -26 0.47 No 51 79.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 185316779 + NM_021627 SENP2 1 6.69 6.35 72 6.96 80.33 43 6.17 Yes 40 0.56 No 25 0.68 Yes -36 0.6 No 34 59.3 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 185322134 + NM_021627 SENP2 1 0.47 0.57 26 8.06 77.79 21 5.86 Yes 8 0.94 Yes 0 0 No -29 0.46 No 40 62.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 185322136 + NM_021627 SENP2 1 0.12 0.14 9 -7.15 75.92 23 6.02 Yes 10 0.94 Yes 0 0 No -31 0.41 No 38 63.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 185329447 + NM_021627 SENP2 1 1.31 1.9 53 -1.76 0 12 4.24 No 15 1.56 Yes 0 0 No -36 0.76 Yes 34 85.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 185329657 + NM_021627 SENP2 1 0.19 0.22 13 5.4 73.96 41 5.18 No 71 -5.82 No 0 0 No -25 0.56 No 45 69.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 185330398 + NM_021627 SENP2 1 0.13 0.15 9 0.15 0 29 5.92 Yes 48 1.25 Yes 0 0 No -33 0.46 No 42 57.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 185341789 + NM_021627 SENP2 1 0.34 0.36 16 -0.32 0 34 7.14 Yes 21 1.35 Yes 0 0 No -33 0.72 Yes 37 69.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 185346314 + NM_021627 SENP2 1 0.32 0.33 18 1.93 84.41 26 6.53 Yes 13 1.02 Yes 0 0 No -29 0.48 No 45 55.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 185346339 + NM_021627 SENP2 1 0.11 0.11 7 5.98 93.18 28 5.29 No 38 1.02 Yes 0 0 No -27 0.41 No 20 61.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 185347740 + NM_021627 SENP2 1 0.16 0.18 11 9.34 94.51 32 5.37 No 55 0.28 No 0 0 No -31 0.59 No 39 67.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7469011 + NM_015670 SENP3 1 0.12 0.17 10 1.21 63.94 23 6.4 Yes 57 -2.3 No 0 0 No -22 0.86 Yes 48 77.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7474175 + NM_015670 SENP3 1 0.17 0.29 19 0.56 76.16 9 4.69 No 19 0.13 No 0 0 No -24 0.6 No 39 40.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7476717 + NR_037926 SENP3-EIF4A1 1 0.07 1.35 49 4.52 83.86 27 5.74 Yes 14 0.45 No 0 0 No -26 0.94 Yes 44 82.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7477839 + NR_037926 SENP3-EIF4A1 1 0.03 1.01 24 2.63 69.78 26 5.65 Yes 13 0.9 Yes 0 0 No -25 0.81 Yes 45 69.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7479628 + NR_037926 SENP3-EIF4A1 1 0.02 0.49 26 3.59 79.22 33 5.09 No 73 -6.03 No 0 0 No -23 0.82 Yes 47 88.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196607557 + NM_152699 SENP5 1 1.57 0.86 41 7.04 93.29 28 5.29 No 66 0.68 No 0 0 No -27 0.67 Yes 18 67.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 196631815 + NM_152699 SENP5 1 0.7 0.58 31 1.85 83.04 15 5.17 No 29 1.19 Yes 29 0.79 Yes -29 0.79 Yes 41 83.94 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 196634512 + NM_152699 SENP5 1 1.42 1.29 48 9.13 81.92 19 4.91 No 6 0.87 Yes 0 0 No -30 0.27 No 44 59.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 196641597 + NM_152699 SENP5 1 1.22 1.08 41 9.64 91.67 20 5.6 Yes 7 0.48 No 0 0 No -26 0.64 No 44 57.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 196650195 + NM_152699 SENP5 1 0.25 0.24 16 10.73 90.14 31 7.7 Yes 18 0.68 No 0 0 No -30 0.89 Yes 40 94.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196651065 + NM_152699 SENP5 1 0.15 0.14 10 4.19 86.74 27 6.02 Yes 60 -5.8 No 0 0 No -22 0.44 No 48 45.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 196654637 + NM_152699 SENP5 1 0.58 0.54 28 -1.25 65.42 68 8.48 Yes -1 0.41 No 28 0.46 Yes -39 0.48 No 31 80.76 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 76330008 + NM_001100409 SENP6 1 0.67 0.9 34 6.43 79.62 22 5.74 Yes 9 0.59 No 0 0 No -21 0.8 Yes 49 79.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 76332466 + NM_001100409 SENP6 1 0.31 0.38 21 5.14 71.57 30 5.57 Yes 29 -3.53 No 29 0.83 Yes -29 0.65 No 41 85.66 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 76331642 + NM_001100409 SENP6 1 3.82 4.83 71 6.42 82.16 29 5.72 Yes 50 -2.71 No 0 0 No -28 0.56 No 41 54.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 76332466 + NM_001100409 SENP6 1 26.68 34.15 72 5.14 71.57 30 5.57 Yes 29 -3.53 No 29 0.83 Yes -29 0.65 No 41 85.66 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 76336725 + NM_001100409 SENP6 1 0.14 0.29 17 3.6 84.79 21 4.68 No 2 1.51 Yes 0 0 No -20 0.63 No 50 53.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 76350399 + NM_001100409 SENP6 1 99.62 63.46 72 6.41 78.79 29 5.76 Yes 30 0.73 No 28 0.83 Yes -28 0.94 Yes 42 95.16 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 76350402 + NM_001100409 SENP6 1 82.87 53.5 72 4.47 76.96 32 5.94 Yes 33 0.74 No 28 0.83 Yes -31 0.94 Yes 39 94.64 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 76376440 + NM_001100409 SENP6 1 1.06 2.53 63 3.28 83.07 12 4.36 No 13 0.22 No 0 0 No -25 0.6 No 45 41.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 76376495 + NM_001100409 SENP6 1 0.19 0.43 21 -0.86 79.24 17 3.76 No 14 0.64 No 0 0 No -26 0.87 Yes 44 49.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 76383967 + NM_001100409 SENP6 1 0.19 0.4 20 5.68 78.09 22 5.71 Yes 3 0.54 No 0 0 No -21 0.86 Yes 49 90.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 76385160 + NM_001100409 SENP6 1 0.12 0.26 14 4.68 0 13 4.36 No 16 1.73 Yes 0 0 No -28 0.87 Yes 42 93.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 76385581 + NM_001100409 SENP6 1 0.05 0.11 7 -0.08 0 9 3.87 No 62 0.91 Yes 0 0 No -42 0.7 Yes 28 90.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 76386751 + NM_001100409 SENP6 1 2.36 4.32 71 1.8 0 9 3.87 No 62 0.72 No 0 0 No -51 0.69 Yes 46 74.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 76386883 + NM_001100409 SENP6 1 3.61 6.72 70 3.24 78.25 37 6.98 Yes 24 1.18 Yes 0 0 No -36 0.41 No 34 77.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 76390719 + NM_001100409 SENP6 1 0.13 0.21 11 4.09 86.43 22 6.32 Yes 31 -1.13 No 0 0 No -27 0.77 Yes 43 69.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 76391195 + NM_001100409 SENP6 1 0.93 1.49 52 1.87 84.41 27 5.74 Yes 14 0.75 No 0 0 No -26 0.92 Yes 44 94.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 76402532 + NM_001100409 SENP6 1 0.08 0.13 8 0.55 69.37 67 11.04 Yes 54 1.02 Yes 0 0 No -24 0.37 No 46 24.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 76407816 + NM_001100409 SENP6 1 0.17 0.33 17 5.59 70.4 51 6.24 Yes 70 0.37 No 0 0 No -51 0.81 Yes 19 95.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 76410649 + NM_001100409 SENP6 1 0.08 0.14 10 6.82 73.65 15 5.19 No 2 0.26 No 0 0 No -20 0.75 Yes 50 69.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 76412338 + NM_001100409 SENP6 1 0.47 0.94 38 2.24 59.04 27 7.28 Yes 11 0.61 No 24 0.63 Yes -26 0.42 No 44 48.87 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 76412601 + NM_001100409 SENP6 1 0.12 0.24 15 6.23 76.87 18 4.49 No 9 0.61 No 0 0 No -22 0.62 No 48 59.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 101052569 - NM_020654 SENP7 1 1.71 0.36 22 10.51 91.5 22 5.72 Yes 9 1.19 Yes 0 0 No -21 0.9 Yes 49 93.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 101082044 - NM_020654 SENP7 1 2.41 0.81 36 8.26 86.5 23 4.5 No 6 1 Yes 0 0 No -22 0.67 Yes 48 67.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 101090448 - NM_020654 SENP7 1 2.76 0.78 31 7.12 90.67 24 5.19 No 74 1.82 Yes 0 0 No -23 0.89 Yes 47 96.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 101121892 - NM_020654 SENP7 1 12.1 2.42 66 9.03 88.52 34 7.22 Yes 8 0.61 No 0 0 No -33 0.86 Yes 37 91.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 101160718 - NM_020654 SENP7 1 0.75 0.32 18 6.63 82.37 38 6 Yes 25 0.33 No 0 0 No -30 0.63 No 49 51.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 101176300 - NM_020654 SENP7 1 1.15 0.5 24 6.95 92.34 20 5.43 No 67 -4.03 No 0 0 No -23 0.7 Yes 47 89.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 101198444 - NM_020654 SENP7 1 1.09 0.47 24 7.74 89.99 28 5.55 No 15 1.26 Yes 0 0 No -27 0.91 Yes 43 87.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 101226889 - NM_020654 SENP7 1 4.31 0.89 41 4.74 84.41 28 6.9 Yes 56 -1.87 No 0 0 No -32 0.54 No 38 69.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 13365042 - NM_012247 SEPHS1 1 3.05 5.82 71 4.5 0 9 3.87 No 18 0.61 No 0 0 No -30 0.93 Yes 40 92.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 13368471 - NM_012247 SEPHS1 1 0.08 0.13 7 3.97 84.41 21 5.99 Yes 8 1.26 Yes 0 0 No -20 0.47 No 45 62.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 13369234 - NM_012247 SEPHS1 1 0.07 0.14 9 3.36 0 38 6.93 Yes 52 1.68 Yes 0 0 No -37 0.42 No 29 49.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 13373282 - NM_012247 SEPHS1 1 0.05 0.1 7 7.07 86.75 31 6 Yes 75 0.66 No 0 0 No -23 0.5 No 39 54.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 13375938 - NM_012247 SEPHS1 1 0.27 0.51 28 3.69 76.95 20 4.69 No 52 1.3 Yes 0 0 No -19 0.42 No 51 50.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 13378346 - NM_012247 SEPHS1 1 0.2 0.31 19 5.62 0 26 7.28 Yes 55 1.46 Yes 0 0 No -25 0.95 Yes 45 96.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 13382909 - NM_012247 SEPHS1 1 1.09 2.24 56 9.5 92.2 29 5.23 No 48 0.12 No 0 0 No -29 0.72 Yes 41 71.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 13386813 - NM_012247 SEPHS1 1 2.56 0.38 16 5.8 85.07 35 4.63 No 57 -3.66 No 0 0 No -23 0.78 Yes 47 78.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 25158620 - NM_016955 SEPSECS 1 1.13 0.26 15 3.59 80.08 92 9.74 Yes 3 1.09 Yes 25 0.47 Yes -28 0.71 Yes 42 64.27 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 25161387 - NM_016955 SEPSECS 1 5.87 0.67 30 7.3 88.56 34 6 Yes 40 1 Yes 33 0.64 Yes -33 0.52 No 33 65.76 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 30390018 - NM_052838 SEPT1 1 0.28 0.63 28 -2.98 0 34 7.34 Yes 21 1.58 Yes 0 0 No -33 0.81 Yes 37 89.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30390134 - NM_052838 SEPT1 1 0.05 0.11 7 5.74 72.63 108 8.92 Yes -4 1.51 Yes 0 0 No -52 0.17 No 62 39.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 30390576 - NM_052838 SEPT1 1 0.33 0.61 31 1.33 75.76 13 4.68 No NA NA NA 0 0 No -18 0.83 Yes 52 71.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30391343 - NM_052838 SEPT1 1 0.73 1.89 52 -0.56 0 15 4.58 No 29 0.78 Yes 0 0 No -41 0.86 Yes 29 94.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 77919039 + NM_001306147 SEPT11 1 0.11 0.4 22 7.78 85.59 22 5.95 Yes 9 0.65 No 0 0 No -18 0.42 No 52 52.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 77935434 + NM_001306147 SEPT11 1 0.19 0.82 36 4.57 85.65 22 4.69 No 9 0.99 Yes 0 0 No -21 0.92 Yes 49 91.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 77938100 + NM_001306147 SEPT11 1 0.04 0.15 11 4.43 83.23 24 5.45 No 68 -3.88 No 0 0 No -24 0.34 No 40 53.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 77953609 + NM_001306147 SEPT11 1 0.03 0.1 7 7.6 90.52 22 5.1 No 9 1.33 Yes 0 0 No -27 0.56 No 43 82.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 242259617 + NM_001321033 SEPT2 1 1.56 1.71 57 9.97 84.9 30 7.81 Yes 61 0.55 No 32 0.71 Yes -32 0.67 Yes 38 68.7 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 242263823 + NM_001321033 SEPT2 1 0.07 0.42 23 3.97 84.41 32 5.83 Yes 19 1.24 Yes 31 0.93 Yes -31 0.82 Yes 39 91.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 242263823 + NM_001321033 SEPT2 1 0.64 3.64 69 3.97 84.41 32 5.83 Yes 19 1.24 Yes 31 0.93 Yes -31 0.82 Yes 39 91.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 242263903 + NM_001321033 SEPT2 1 0.03 0.17 9 -0.2 0 28 5.87 Yes 15 1.04 Yes 0 0 No -27 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 242265413 + NM_001321033 SEPT2 1 0.07 0.39 20 -0.08 0 13 3.87 No 5 0.63 No 0 0 No -37 0.86 Yes 33 91.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242269025 + NM_001321033 SEPT2 1 0.05 0.4 24 7.75 92.19 27 5.37 No 14 0.57 No 0 0 No -26 0.94 Yes 44 93.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242269025 + NM_001321033 SEPT2 1 0.06 0.44 27 7.75 92.19 27 5.37 No 14 0.57 No 0 0 No -26 0.94 Yes 44 93.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242274549 + NM_001321033 SEPT2 1 0.01 0.11 7 -2.4 0 13 3.89 No 22 0.48 No 0 0 No -34 0.78 Yes 36 89.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242274736 + NM_001321033 SEPT2 1 0.25 1.42 51 8.91 90.04 37 5.22 No 35 0.82 Yes 29 0.89 Yes -29 0.92 Yes 41 96.71 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 242275373 + NM_001321033 SEPT2 1 0.77 4.33 72 5.53 75.8 40 6.56 Yes 50 0.86 Yes 26 0.85 Yes -26 0.92 Yes 44 93.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 242275390 + NM_001321033 SEPT2 1 0.05 0.28 18 -12.55 0 20 5.07 No 67 0.86 Yes 0 0 No -19 0.65 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242275391 + NM_001321033 SEPT2 1 0.02 0.11 8 -11.88 0 21 5.17 No 68 0.86 Yes 0 0 No -20 0.73 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 242276199 + NM_001321033 SEPT2 1 0.34 1.29 45 9.84 80.6 44 7.75 Yes 31 1.93 Yes 30 0.73 Yes -30 0.43 No 27 79.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 242276797 + NM_001321033 SEPT2 1 0.03 0.11 8 -8.77 0 21 7.23 Yes 8 1.49 Yes 0 0 No -27 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 242277616 + NM_001321033 SEPT2 1 0.08 0.46 23 0 61.79 36 6.24 Yes 62 0.55 No 0 0 No -35 0.78 Yes 35 84.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242277619 + NM_001321033 SEPT2 1 0.03 0.17 9 -1.13 60.51 39 6.48 Yes 65 0.56 No 0 0 No -38 0.79 Yes 32 84.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242283202 + NM_001321033 SEPT2 1 0.02 0.11 7 2.72 70.77 26 6.11 Yes 76 0.27 No 0 0 No -25 0.57 No 45 55.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 242288916 + NM_001321033 SEPT2 1 0.05 0.29 14 4.49 76.8 46 7.45 Yes 33 1.69 Yes 0 0 No -41 0.58 No 29 68.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242288935 + NM_001321033 SEPT2 1 0.04 0.22 15 14.26 85.69 25 5.21 No 52 2.06 Yes 0 0 No -24 0.77 Yes 46 77.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242291357 + NM_001321033 SEPT2 1 1.79 8.49 71 5.06 69.85 33 5.64 Yes 1 1.51 Yes 28 0.57 Yes -32 0.8 Yes 38 56.26 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chrX 118754015 - NM_015129 SEPT6 1 103.6 4.68 70 10.57 90.69 26 5.28 No 54 2.01 Yes 25 0.85 Yes -25 0.81 Yes 45 85.81 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 118759343 - NM_015129 SEPT6 1 11028.47 445.69 72 6.36 87.88 23 4.35 No 71 2.37 Yes 22 0.86 Yes -22 0.95 Yes 48 93.2 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 118759360 - NM_015129 SEPT6 1 181.92 7.46 72 3.39 82.29 40 6.13 Yes 54 2.37 Yes 22 0.86 Yes -22 0.72 Yes 48 74.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 118763685 - NM_015129 SEPT6 1 0.02 0.14 9 5.76 88.4 27 5.38 No 55 0.76 No 0 0 No -22 0.51 No 48 37.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118767449 - NM_015129 SEPT6 1 0.15 0.93 35 1.74 0 13 3.98 No 8 0.17 No 0 0 No -25 0.86 Yes 45 85.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 118767449 - NM_015129 SEPT6 1 0.02 0.14 10 1.74 0 13 3.98 No 8 0.17 No 0 0 No -25 0.86 Yes 45 85.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 118767455 - NM_015129 SEPT6 1 0.02 0.11 7 -17.99 0 20 5.71 Yes 2 0.59 No 0 0 No -19 0.83 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 118796676 - NM_015129 SEPT6 1 0.06 0.35 15 7.67 89.89 35 6.94 Yes 22 0.27 No 0 0 No -34 0.45 No 36 53.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118797632 - NM_015129 SEPT6 1 0.05 0.24 14 -13.82 0 12 3.87 No 18 0.71 No 0 0 No -30 0.57 No 40 64.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118820613 - NM_015129 SEPT6 1 0.19 0.56 32 5.66 82.17 19 4.89 No 60 0.62 No 19 0.35 Yes -23 0.43 No 51 65.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 35878173 + NM_001011553 SEPT7 1 0.81 4.85 72 7.92 87.64 29 6.32 Yes 16 1.31 Yes 0 0 No -28 0.9 Yes 42 95.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 35884394 + NM_001011553 SEPT7 1 0.05 0.29 16 4.47 85.02 17 5.39 No 4 1.2 Yes 0 0 No -25 0.6 No 45 73.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 35903212 + NM_001011553 SEPT7 1 0.08 0.5 24 6.52 89.19 23 6.1 Yes 66 0.89 Yes 0 0 No -22 0.88 Yes 48 82.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 35913223 + NM_001011553 SEPT7 1 0.03 0.28 16 -1.81 0 17 4.12 No 36 1.02 Yes 29 0.63 Yes -28 0.43 No 50 46 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 35919205 + NM_001011553 SEPT7 1 0.21 1.51 55 10.8 84.24 35 4.59 No 66 -1.89 No 31 0.15 Yes -31 0.48 No 39 62.42 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 35937824 + NM_001011553 SEPT7 1 0.18 1.57 51 7.71 92.52 31 4.48 No 40 0.97 Yes 30 0.73 Yes -30 0.9 Yes 40 90.62 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 35941840 + NM_001011553 SEPT7 1 0.01 0.15 8 10.71 95.65 18 6.45 Yes 5 1.55 Yes 0 0 No -34 0.49 No 36 57.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 45766461 - NR_024271 SEPT7P2 1 223.19 12.56 71 6.8 81.68 30 6.85 Yes 17 1.79 Yes 0 0 No -29 0.6 No 38 57.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 45766918 - NR_024271 SEPT7P2 1 12.21 0.65 32 2.44 75.95 42 6.76 Yes 13 -1.79 No 0 0 No -31 0.84 Yes 39 87.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 45779115 - NR_024271 SEPT7P2 1 0.74 0.29 18 8.53 78.73 25 4.69 No 20 0.47 No 0 0 No -24 0.7 Yes 49 71.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 45786548 - NR_024271 SEPT7P2 1 2.79 0.85 39 4.74 84.41 30 6 Yes 17 0.84 Yes 29 0.76 Yes -22 0.37 No 44 60.29 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 45805412 - NR_024271 SEPT7P2 1 3.82 0.32 17 11.7 89.9 28 5.65 Yes 15 0.92 Yes 27 0.9 Yes -27 0.9 Yes 43 94.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 132099533 - NM_001098811 SEPT8 1 0.23 0.21 11 4.01 79.76 15 5.02 No 76 -5.01 No 0 0 No -20 0.56 No 40 57.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 132099579 - NM_001098811 SEPT8 1 34.12 29.58 72 -1.33 0 14 3.86 No 59 0.33 No 29 0.19 Yes -22 0.85 Yes 48 70.91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 132109905 - NM_001098811 SEPT8 1 1.03 0.32 19 8.02 86.34 26 5.15 No 13 1.61 Yes 25 0.95 Yes -25 0.94 Yes 45 94.71 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 75483510 + NM_001113495 SEPT9 1 0.12 0.71 32 3.41 0 30 6.71 Yes 17 2.61 Yes 24 0.95 Yes -29 0.88 Yes 41 92.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 75484323 + NM_001113495 SEPT9 1 0.04 0.31 18 -11.62 0 28 6.91 Yes 15 2.01 Yes 0 0 No -27 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 75486829 + NM_001113495 SEPT9 1 0.39 2.92 64 2.48 0 9 3.87 No 15 1.58 Yes 0 0 No -27 0.95 Yes 43 93.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 75489064 + NM_001113495 SEPT9 1 0.03 0.18 11 -8.91 72.09 30 7.91 Yes 17 1.18 Yes 0 0 No -29 0.87 Yes 41 89.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 75492295 + NM_001113495 SEPT9 1 0.09 0.68 32 6.92 87.49 20 6.08 Yes 7 1.16 Yes 19 0.67 Yes -19 0.77 Yes 51 86.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 75493374 + NM_001113495 SEPT9 1 0.01 0.1 7 -0.33 60.99 16 5.57 Yes 71 0.85 Yes 25 0.76 Yes -15 0.36 No 61 35.31 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 67878942 - NM_015640 SERBP1 1 0.01 0.18 12 -0.6 0 27 6.54 Yes 14 0.74 No 0 0 No -26 0.91 Yes 44 89.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 67882850 - NM_015640 SERBP1 1 0.03 0.43 24 6.14 79.47 27 5.29 No 29 1.16 Yes 0 0 No -26 0.83 Yes 44 74.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 67890006 - NM_015640 SERBP1 1 29.43 413.28 72 11.32 83.09 31 6.08 Yes 27 0.22 No 30 0.5 Yes -34 0.56 No 42 58.97 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 67890006 - NM_015640 SERBP1 1 0.01 0.13 9 11.32 83.09 31 6.08 Yes 27 0.22 No 30 0.5 Yes -34 0.56 No 42 58.97 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 67890661 - NM_015640 SERBP1 1 140.11 1029.57 72 -2.24 0 16 4.24 No 3 1.2 Yes 30 0.59 Yes -15 0.76 Yes 55 67.09 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 67890670 - NM_015640 SERBP1 1 0.04 0.29 17 -0.51 77.92 22 5 No 75 0.83 Yes 30 0.59 Yes -21 0.83 Yes 49 79.77 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 67891307 - NM_015640 SERBP1 1 0.01 0.15 11 13.27 92.08 29 6.88 Yes 16 1.67 Yes 0 0 No -28 0.59 No 42 64.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 67891987 - NM_015640 SERBP1 1 0.02 0.17 9 7.24 91.12 37 6.12 Yes 24 0.76 No 24 0.94 Yes -21 0.69 Yes 49 68.02 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 44093276 + NR_037673 SERF2-C15ORF63 1 0.03 0.11 7 9.44 79.57 39 6.17 Yes 41 1.58 Yes 0 0 No -26 0.4 No 45 53.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 17868309 - NR_104040 SERGEF 1 2.08 0.49 23 7.67 89.85 31 6.94 Yes 3 0.81 Yes 30 0.61 Yes -30 0.49 No 40 50.25 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 17869042 - NR_104040 SERGEF 1 1.32 0.25 12 11.41 88.62 30 4.99 No 42 -2.98 No 0 0 No -30 0.74 Yes 40 60.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 17885330 - NR_104040 SERGEF 1 1.11 0.22 14 11.77 89.93 16 6.25 Yes 3 1.2 Yes 0 0 No -26 0.73 Yes 44 68.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 17888551 - NR_104040 SERGEF 1 1.11 0.28 16 6.52 77.93 25 5.72 Yes 12 0.4 No 0 0 No -24 0.97 Yes 46 97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 17895667 - NR_104040 SERGEF 1 0.48 0.14 8 11.48 83.91 26 7.62 Yes 13 1.79 Yes 0 0 No -25 0.75 Yes 45 76.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 17896025 - NR_104040 SERGEF 1 3.74 0.86 40 11.17 88.61 24 5.55 No 11 0.92 Yes 0 0 No -23 0.73 Yes 47 52.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 17899545 - NR_104040 SERGEF 1 6.73 1.57 51 4.97 0 15 3.89 No 2 0.64 No 18 0.69 Yes -18 0.73 Yes 52 66.1 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 17983839 - NR_104040 SERGEF 1 1.43 0.29 16 7.65 86.47 31 5.25 No 52 0.68 No 0 0 No -30 0.76 Yes 40 72.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 18008919 - NR_104040 SERGEF 1 4.64 1.13 50 11.67 92.19 21 6.16 Yes 8 1.03 Yes 0 0 No -27 0.52 No 43 80.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 18010223 - NR_104040 SERGEF 1 2 0.97 39 9.45 84.57 30 5.74 Yes 17 1.24 Yes 0 0 No -29 0.94 Yes 41 97.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 18017216 - NR_104040 SERGEF 1 0.76 0.33 21 6.93 78.67 15 6.36 Yes 2 1.9 Yes 0 0 No -39 0.58 No 39 69.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 18021115 - NR_104040 SERGEF 1 0.32 0.13 9 -2.98 0 62 8.75 Yes 49 2.6 Yes 0 0 No -38 0.66 No 32 59.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 18021120 - NR_104040 SERGEF 1 10.33 3.68 70 5.16 80.58 57 8.46 Yes 44 2.61 Yes 33 0.85 Yes -33 0.71 Yes 14 80.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 18026099 - NR_104040 SERGEF 1 0.41 0.15 9 0.82 69.17 24 4.35 No 65 1.49 Yes 0 0 No -23 0.73 Yes 52 58.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 18028542 - NR_104040 SERGEF 1 0.88 0.36 23 6.82 90.19 25 6.52 Yes 12 0.47 No 0 0 No -28 0.54 No 42 55.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 31900147 + NM_001199038 SERINC2 1 0.43 0.14 9 0.66 63.26 29 5.36 No 25 0.23 No 0 0 No -28 0.38 No 20 36.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 31904167 + NM_001199038 SERINC2 1 4.45 2.25 51 8.99 88.27 27 6.71 Yes 67 -2.68 No 0 0 No -27 0.91 Yes 43 93.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 43131223 - NM_006811 SERINC3 1 0.64 1.43 49 7.71 85.05 33 7.21 Yes 20 0.94 Yes 0 0 No -32 0.79 Yes 38 61.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 43142256 - NM_006811 SERINC3 1 0.28 0.46 24 7.46 80.24 43 6.85 Yes 70 -2.88 No 0 0 No -29 0.61 No 41 70.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 43142665 - NM_006811 SERINC3 1 0.17 0.22 14 7.58 82.72 25 5.1 No 26 0.73 No 0 0 No -24 0.97 Yes 46 96.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 43142706 - NM_006811 SERINC3 1 0.36 0.43 28 -2.24 0 14 4.36 No 52 1.3 Yes 21 0.84 Yes -13 0.42 No 57 15.4 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 43148056 - NM_006811 SERINC3 1 0.71 0.89 37 6.64 75.67 44 7.85 Yes 31 0.8 Yes 29 0.55 Yes -36 0.72 Yes 34 67.49 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 79454780 - NR_126061 SERINC5 1 3.06 0.29 17 4.35 0 10 3.87 No 15 1.23 Yes 30 0.79 Yes -27 0.52 No 40 56.81 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 150262442 - NM_014445 SERP1 1 0.07 0.78 33 6.86 94.25 34 5.98 Yes 21 0.88 Yes 0 0 No -33 0.54 No 41 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 150262728 - NM_014445 SERP1 1 0.03 0.33 19 -0.01 63.69 42 7.39 Yes 29 1.6 Yes 0 0 No -41 0.8 Yes 29 84.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 2836250 - NR_073111 SERPINB1 1 0.12 0.14 8 -9.97 0 11 4.12 No 15 0.59 No 0 0 No -36 0.82 Yes 34 66.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 2836254 - NR_073111 SERPINB1 1 1.91 2.6 55 -5.38 0 33 5.73 Yes 11 0.61 No 0 0 No -32 0.76 Yes 38 67.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 2838213 - NR_073111 SERPINB1 1 0.1 0.13 7 4.01 79.8 26 5.19 No 13 0.09 No 0 0 No -25 0.76 Yes 45 81.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 61577418 + NM_005024 SERPINB10 1 1.31 0.5 22 6.42 69.09 14 5.47 No 1 0.96 Yes 0 0 No -25 0.56 No 45 59.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 61577430 + NM_005024 SERPINB10 1 4.89 2.1 52 5.79 0 16 4.57 No 13 1.28 Yes 0 0 No -25 0.47 No 45 80.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 61653491 + NM_198833 SERPINB8 1 0.35 0.21 12 3.74 69.44 49 7 Yes 55 -1.87 No 31 0.18 Yes -32 0.51 No 22 55.68 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 61654196 + NM_198833 SERPINB8 1 6.39 3.57 69 6.17 90.83 23 4.4 No 4 0.08 No 22 0.72 Yes -22 0.82 Yes 48 76.19 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 2890643 - NM_004155 SERPINB9 1 0.06 0.17 11 9.22 84.03 51 8.02 Yes 38 0.3 No 0 0 No -22 0.41 No 41 67.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 2892338 - NM_004155 SERPINB9 1 0.05 0.28 14 11.49 85.86 36 7.35 Yes 23 1.93 Yes 0 0 No -35 0.9 Yes 35 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 2902651 - NM_004155 SERPINB9 1 0.9 1.69 50 3.72 77.75 38 5.16 No 25 1.06 Yes 0 0 No -28 0.46 No 42 72.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 2903100 - NM_004155 SERPINB9 1 0.55 1.13 40 7.62 81.08 30 8.31 Yes 17 1.64 Yes 0 0 No -29 0.97 Yes 41 97.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 109316201 - NM_014454 SESN1 1 0.63 0.28 13 3.66 77.9 20 5.02 No 41 -1.65 No 0 0 No -23 0.45 No 51 43.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 109319846 - NM_014454 SESN1 1 1.67 1.39 41 2.2 62.04 48 7.97 Yes 35 1.44 Yes 0 0 No -47 0.89 Yes 23 96.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28598828 + NM_031459 SESN2 1 0.44 0.88 37 6.61 85.84 19 4.9 No 50 1.04 Yes 0 0 No -21 0.48 No 49 56.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 28598854 + NM_031459 SESN2 1 0.08 0.14 8 0.13 0 12 4.24 No 76 1.04 Yes 0 0 No -35 0.73 Yes 52 51.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 28599841 + NM_031459 SESN2 1 0.08 0.13 7 -24.02 0 16 3.87 No 24 -2.45 No 21 0.91 Yes -15 0.65 No 11 33.17 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 131454212 + NM_001248001 SET 1 0.01 0.14 9 5.6 81.87 27 6.45 Yes 66 -4.04 No 0 0 No -26 0.64 No 44 77.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 131455148 + NM_001248001 SET 1 0.01 0.17 12 -29.6 0 25 6.91 Yes 12 1.57 Yes 0 0 No -24 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 131456022 + NM_001248001 SET 1 0 0.11 8 6.79 86.22 16 6.59 Yes 3 0.79 Yes 0 0 No -28 0.45 No 42 71.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 131456922 + NM_001248001 SET 1 0.02 0.42 23 -4.5 85.43 25 5.95 Yes 12 1.58 Yes 0 0 No -24 0.93 Yes 46 91.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30975463 + NM_014712 SETD1A 1 0.29 0.14 9 1.68 83.08 22 4.9 No 9 1.58 Yes 0 0 No -21 0.94 Yes 49 91.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30978140 + NM_014712 SETD1A 1 0.91 0.56 26 1.27 59.51 38 6.4 Yes 44 -0.27 No 0 0 No -32 0.73 Yes 38 75.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30978186 + NM_014712 SETD1A 1 0.18 0.11 7 -0.34 63 42 6.4 Yes 29 -2.2 No 20 0.93 Yes -41 0.52 No 40 36.07 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 122243696 + NM_015048 SETD1B 1 0.2 0.1 7 11.61 86.37 42 6.93 Yes 72 0.7 No 0 0 No -41 0.26 No 17 31.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 122247706 + NM_015048 SETD1B 1 1.87 0.92 38 7.59 89.17 31 7.14 Yes 18 1.04 Yes 0 0 No -30 0.97 Yes 40 97.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122252020 + NM_015048 SETD1B 1 0.56 0.13 8 -5.35 0 13 4.24 No 28 2.01 Yes 0 0 No -40 0.67 Yes 30 89.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47079264 - NM_014159 SETD2 1 0.21 0.14 9 4.55 0 34 6.16 Yes 21 1.6 Yes 0 0 No -33 0.85 Yes 37 75.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47082974 - NM_014159 SETD2 1 3.04 2.14 61 9.95 87.64 54 6.81 Yes 68 1.45 Yes 0 0 No -27 0.81 Yes 43 80.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47102985 - NM_014159 SETD2 1 0.11 0.14 9 4.58 76.7 29 5.98 Yes 24 0.59 No 0 0 No -28 0.86 Yes 42 84.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47106121 - NM_014159 SETD2 1 0.45 0.49 24 5.71 80.2 28 6.32 Yes 15 1.86 Yes 27 0.93 Yes -27 0.86 Yes 43 89.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 47114638 - NM_014159 SETD2 1 0.26 0.18 12 3.54 84.41 25 5.33 No 12 1.35 Yes 0 0 No -24 0.92 Yes 46 98.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47121102 - NM_014159 SETD2 1 0.3 0.22 15 10.28 90.56 28 5.66 Yes 15 0.96 Yes 0 0 No -27 0.47 No 43 53.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47122574 - NM_014159 SETD2 1 32.83 26.08 72 3.73 78.14 40 5.32 No 9 0.92 Yes 22 0.77 Yes -21 0.74 Yes 49 71.39 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 47142962 - NM_014159 SETD2 1 0.12 0.18 13 3.2 78.1 16 5.16 No -4 0.11 No 0 0 No -22 0.9 Yes 48 89.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47168149 - NM_014159 SETD2 1 0.36 0.18 10 -14.96 0 52 6.52 Yes 71 0.83 Yes 0 0 No -54 0.91 Yes 16 92.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47168152 - NM_014159 SETD2 1 1.65 0.65 30 -13.6 50.31 49 6.37 Yes 68 0.84 Yes 0 0 No -51 0.89 Yes 19 89.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47168177 - NM_014159 SETD2 1 0.42 0.19 13 -3.37 0 24 4.67 No 43 0.88 Yes 36 0.5 Yes -26 0.91 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 47168181 - NM_014159 SETD2 1 0.36 0.17 12 -0.33 0 20 4.42 No 39 0.87 Yes 36 0.5 Yes -22 0.88 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 47169683 - NM_014159 SETD2 1 0.37 0.15 11 3.64 67.3 21 5.83 Yes 24 0.6 No 0 0 No -30 0.52 No 43 42.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47188114 - NM_014159 SETD2 1 2.31 1.04 44 9.84 88.27 26 5.56 Yes 59 -3.2 No 0 0 No -28 0.79 Yes 42 82.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 99865459 - NM_032233 SETD3 1 0.13 0.18 9 0.09 0 25 6.4 Yes 12 0.58 No 0 0 No -24 0.44 No 42 64.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 99866594 - NM_032233 SETD3 1 0.52 0.61 32 -0.3 75.6 31 5.92 Yes 18 1.54 Yes 0 0 No -30 0.91 Yes 40 96.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 99870642 - NM_032233 SETD3 1 0.24 0.29 19 2.12 0 12 3.87 No 17 1.67 Yes 0 0 No -29 0.71 Yes 41 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 99876494 - NM_032233 SETD3 1 0.22 0.18 10 6.06 79.52 19 5 No 73 1.91 Yes 0 0 No -18 0.63 No 52 76.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 99876553 - NM_032233 SETD3 1 9.05 7.54 71 4.67 86.9 31 5.51 No 18 2.22 Yes 26 0.96 Yes -26 0.65 No 40 73.22 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 99876588 - NM_032233 SETD3 1 0.48 0.4 21 8.18 81.51 32 6.94 Yes 60 0.16 No 26 0.96 Yes -32 0.43 No 35 45.99 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 99916000 - NM_032233 SETD3 1 0.06 0.11 8 12.58 94.32 22 6.78 Yes 9 1.66 Yes 0 0 No -21 0.9 Yes 49 89.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 99924042 - NM_032233 SETD3 1 0.16 0.24 12 10.31 90.51 51 8.17 Yes 38 1.24 Yes 0 0 No -21 0.42 No 49 60.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 99925229 - NM_032233 SETD3 1 0.18 0.39 20 5.63 80.39 27 5.39 No 43 1.31 Yes 0 0 No -26 0.47 No 25 52.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 99925249 - NM_032233 SETD3 1 0.09 0.19 12 1.81 0 36 7.2 Yes 23 1.3 Yes 0 0 No -25 0.81 Yes 45 72.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 99925519 - NM_032233 SETD3 1 0.08 0.13 8 3.19 0 33 6.49 Yes 20 0.91 Yes 0 0 No -35 0.7 Yes 35 86.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 99932393 - NM_032233 SETD3 1 0.5 0.26 15 5.51 77.83 19 5.39 No 6 0.36 No 0 0 No -22 0.67 Yes 48 57.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 99941672 - NM_032233 SETD3 1 0.66 0.32 17 8.61 87.71 41 6.83 Yes 28 1.62 Yes 0 0 No -40 0.78 Yes 30 85.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 37408979 - NM_001286752 SETD4 1 14.35 1.08 47 5.48 72.92 38 5.98 Yes 2 1.24 Yes 0 0 No -32 0.75 Yes 38 63.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 37414066 - NM_001286752 SETD4 1 1.26 0.13 8 8.54 83.55 37 6.55 Yes 24 0.82 Yes 0 0 No -36 0.75 Yes 34 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 37416268 - NM_001286752 SETD4 1 2.59 0.67 31 4.19 69.96 30 5.27 No 39 0.14 No 18 0.86 Yes -22 0.43 No 41 65 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr21 37416941 - NM_001286752 SETD4 1 0.85 0.22 14 8.4 84.64 28 5.7 Yes -2 0.05 No 0 0 No -28 0.68 Yes 42 60.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 37418063 - NM_001286752 SETD4 1 0.73 0.29 20 11.03 89.49 25 5.39 No 67 -3.53 No 0 0 No -29 0.49 No 48 57.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 37418063 - NM_001286752 SETD4 1 0.75 0.28 12 11.03 89.49 25 5.39 No 67 -3.53 No 0 0 No -29 0.49 No 48 57.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9463006 + NM_001080517 SETD5 1 0.97 0.68 25 10.69 91.79 42 6.63 Yes 36 1.84 Yes 0 0 No -37 0.52 No 29 74.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 9463162 + NM_001080517 SETD5 1 1.37 0.86 44 9.2 84.43 23 5.39 No 25 0.75 No 0 0 No -22 0.78 Yes 48 79.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 9464406 + NM_001080517 SETD5 1 1.25 0.83 34 5.3 87.4 33 7.01 Yes 5 0.95 Yes 0 0 No -33 0.34 No 37 55.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 9467772 + NM_001080517 SETD5 1 0.3 0.24 14 9.95 92.16 29 5.54 No 37 0.98 Yes 28 0.83 Yes -28 0.79 Yes 42 72.99 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 9470484 + NM_001080517 SETD5 1 0.31 0.25 13 3.5 80.48 22 3.87 No 9 0.59 No 27 0.8 Yes -21 0.49 No 49 54.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 9471252 + NM_001080517 SETD5 1 2.33 0.79 35 7.48 89.62 31 4.01 No 46 0.37 No 0 0 No -24 0.8 Yes 46 79.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 9471510 + NM_001080517 SETD5 1 189.27 59.65 72 8.28 90.43 58 7.85 Yes 45 1.85 Yes 33 0.78 Yes -57 0.5 No 13 73.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 9471514 + NM_001080517 SETD5 1 1.03 0.31 20 -1 0 62 8.1 Yes 49 1.84 Yes 0 0 No -61 0.65 No 33 40.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 9475053 + NM_001080517 SETD5 1 21.62 7.07 71 10.02 94.25 40 5.96 Yes 5 0.26 No 26 0.64 Yes -26 0.63 No 44 79.77 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 9475960 + NM_001080517 SETD5 1 0.14 0.1 7 8.31 90.17 23 6.59 Yes 10 0.12 No 22 0.72 Yes -22 0.76 Yes 48 74.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 9475728 + NM_001080517 SETD5 1 4.38 3.33 67 4.07 81.58 46 6.44 Yes 13 1.14 Yes 25 0.81 Yes -25 0.49 No 35 67.01 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 9475960 + NM_001080517 SETD5 1 61.05 45.35 72 8.31 90.17 23 6.59 Yes 10 0.12 No 22 0.72 Yes -22 0.76 Yes 48 74.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 9476246 + NM_001080517 SETD5 1 0.15 0.15 9 -15.35 0 13 3.16 No 62 0.02 No 31 0.88 Yes -57 0.38 No 13 23 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 9476273 + NM_001080517 SETD5 1 8.67 7.6 72 6.63 76.78 32 6 Yes 19 0.46 No 31 0.88 Yes -31 0.89 Yes 39 92.65 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 9476687 + NM_001080517 SETD5 1 0.54 0.56 30 6.88 75.87 24 6.14 Yes 2 1.02 Yes 0 0 No -23 0.96 Yes 47 96.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9477751 + NM_001080517 SETD5 1 0.73 0.89 37 6.39 74.97 22 5.71 Yes 9 1.2 Yes 0 0 No -21 0.78 Yes 49 74.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9478533 + NM_001080517 SETD5 1 16.33 18.88 72 7.4 74.7 39 6.66 Yes 45 1.09 Yes 23 0.77 Yes -39 0.65 No 31 81.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 9483282 + NM_001080517 SETD5 1 0.07 0.1 7 2.78 0 13 3.86 No 19 0.84 Yes 0 0 No -31 0.67 Yes 39 70 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9486728 + NM_001080517 SETD5 1 2.34 2.31 61 0.06 81.45 30 5.66 Yes 66 1.13 Yes 32 0.75 Yes -29 0.88 Yes 41 90.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 9487303 + NM_001080517 SETD5 1 0.55 0.82 42 4.94 91.14 23 3.92 No 0 0.67 No 22 0.7 Yes -22 0.4 No 50 29.15 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 9487344 + NM_001080517 SETD5 1 0.16 0.25 16 -6.67 0 26 6.04 Yes 41 0.61 No 0 0 No -30 0.66 No 40 80.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 9488785 + NM_001080517 SETD5 1 0.14 0.19 12 1.5 68.48 23 5.99 Yes 10 0.15 No 0 0 No -22 0.67 Yes 48 68.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 9491163 + NM_001080517 SETD5 1 0.97 1.24 47 12.22 87.92 45 6.71 Yes 48 0.18 No 24 0.66 Yes -24 0.58 No 46 77.09 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 9494571 + NM_001080517 SETD5 1 3.72 4.82 70 6.63 87.75 34 6.85 Yes 64 1.17 Yes 0 0 No -27 0.88 Yes 43 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9494576 + NM_001080517 SETD5 1 0.17 0.24 15 2.27 0 39 7.19 Yes 69 1.16 Yes 0 0 No -32 0.87 Yes 38 90.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9495688 + NM_001080517 SETD5 1 4.46 5.47 71 8.95 90.19 29 4.91 No 16 0.67 No 28 0.89 Yes -28 0.68 Yes 42 56.28 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 9506093 + NM_001080517 SETD5 1 0.58 0.67 34 2.46 67.65 28 6.65 Yes 67 -4.92 No 22 0.92 Yes -27 0.77 Yes 43 91.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 9506216 + NM_001080517 SETD5 1 0.16 0.19 12 9.23 86.01 23 5.74 Yes 10 0.74 No 0 0 No -22 0.43 No 48 59.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9507161 + NM_001080517 SETD5 1 0.56 0.57 30 10.86 92.68 32 7.91 Yes 59 0.23 No 0 0 No -31 0.31 No 39 44.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9507652 + NM_001080517 SETD5 1 0.22 0.21 9 6.54 90.11 18 5.48 No 5 0.21 No 0 0 No -23 0.72 Yes 53 77.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 9510202 + NM_001080517 SETD5 1 36.7 37.31 72 10.36 81.94 25 4.6 No 76 2.25 Yes 24 0.78 Yes -24 0.58 No 46 67.07 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 9516983 + NM_001080517 SETD5 1 1.78 2.08 56 10.42 89.21 20 4.24 No 66 0.49 No 0 0 No -24 0.51 No 51 57.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 58550718 + NM_001160305 SETD6 1 0.62 0.15 10 -0.5 0 16 3.66 No 54 0.46 No 0 0 No -29 0.89 Yes 41 78.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 58551799 + NM_001160305 SETD6 1 0.78 0.21 12 9.02 91.32 31 5.23 No 76 -3.94 No 0 0 No -25 0.59 No 45 77.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 58551923 + NM_001160305 SETD6 1 4.7 1.18 47 -0.91 67.65 27 4.5 No 37 0.86 Yes 20 0.8 Yes -20 0.61 No 33 72.05 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 58552084 + NM_001160305 SETD6 1 7.4 1.9 54 3.38 74.31 44 9.48 Yes -3 0.57 No 21 0.48 Yes -39 0.67 Yes 31 73.48 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 56210691 + NM_001323018 SETD9 1 0.72 0.13 7 2.86 0 52 7.07 Yes 39 0.73 No 0 0 No -26 0.85 Yes 44 68.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 150902473 + NM_001145415 SETDB1 1 0.89 0.68 29 0.28 0 21 4.58 No 47 1.43 Yes 20 0.93 Yes -20 0.89 Yes 50 93.5 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 150917310 + NM_001145415 SETDB1 1 0.38 0.22 13 2.36 62.55 35 6.95 Yes 22 1.51 Yes 0 0 No -34 0.79 Yes 36 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150921842 + NM_001145415 SETDB1 1 239.17 31.65 72 7.53 78.06 30 8.24 Yes 73 0.84 Yes 29 0.88 Yes -29 0.84 Yes 41 82.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 150932659 + NM_001145415 SETDB1 1 1.44 0.58 30 9.38 86.44 21 5.06 No 8 1.07 Yes 0 0 No -28 0.92 Yes 42 92.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150933177 + NM_001145415 SETDB1 1 2 0.78 32 8.07 86.47 23 5.73 Yes 10 1.3 Yes 0 0 No -22 0.8 Yes 48 81.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150933180 + NM_001145415 SETDB1 1 0.32 0.13 7 2.39 77.96 26 5.99 Yes 13 1.28 Yes 0 0 No -25 0.83 Yes 45 80.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150936475 + NM_001145415 SETDB1 1 0.56 0.38 23 -1.96 0 27 6.05 Yes 58 1.59 Yes 0 0 No -31 0.89 Yes 39 85.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 150936725 + NM_001145415 SETDB1 1 2.33 1.33 49 2.97 76.03 65 7.35 Yes 52 1.02 Yes 27 0.55 Yes -28 0.75 Yes 42 79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 50019688 + NM_001320727 SETDB2-PHF11 1 1.08 0.42 23 10.72 88.21 50 7.4 Yes 57 0.95 Yes 34 0.73 Yes -34 0.46 No 36 49.18 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 50023167 + NM_001320727 SETDB2-PHF11 1 1.16 0.46 24 9.15 87.17 25 7.03 Yes 36 0.76 No 0 0 No -29 0.55 No 41 60.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 50029303 + NM_001320727 SETDB2-PHF11 1 0.25 0.11 8 6.57 81.82 32 5.51 No 27 0.73 No 0 0 No -31 0.74 Yes 39 72.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 50032300 + NM_001320727 SETDB2-PHF11 1 0.58 0.29 14 8.76 90.12 29 4.79 No 40 1.13 Yes 0 0 No -28 0.5 No 42 52.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 50049643 + NM_001320727 SETDB2-PHF11 1 1.04 0.44 20 5.75 85.05 22 6 Yes 9 0.74 No 0 0 No -21 0.88 Yes 49 90.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 50049647 + NM_001320727 SETDB2-PHF11 1 0.75 0.32 18 3.56 0 26 6.32 Yes 13 0.72 No 0 0 No -25 0.89 Yes 45 90.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 50056166 + NM_001320727 SETDB2-PHF11 1 1.67 0.99 44 10.45 84.39 35 6.7 Yes 22 0.13 No 0 0 No -34 0.93 Yes 36 93.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 50082927 + NM_001320727 SETDB2-PHF11 1 0.46 0.51 27 11.66 93.61 26 6.91 Yes 36 1.18 Yes 0 0 No -25 0.46 No 44 72.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 50094054 + NM_001320727 SETDB2-PHF11 1 0.09 0.14 9 4.89 78.33 17 3.99 No 69 1.11 Yes 0 0 No -25 0.52 No 45 44.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 50094204 + NM_001320727 SETDB2-PHF11 1 0.19 0.31 19 6.64 84.42 33 7.29 Yes 20 1.23 Yes 0 0 No -27 0.69 Yes 43 81.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 50095273 + NM_001320727 SETDB2-PHF11 1 0.09 0.13 9 1.94 69.56 28 7.64 Yes 15 1.82 Yes 27 0.92 Yes -27 0.62 No 43 67.97 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 50101341 + NM_001320727 SETDB2-PHF11 1 0.95 1.28 44 4.79 0 19 3.23 No 36 1.18 Yes 22 0.84 Yes -18 0.7 Yes 48 81.98 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 4355330 + NM_006515 SETMAR 1 74.79 7.36 71 8.63 82.41 28 7.86 Yes 15 0.14 No 27 0.58 Yes -27 0.56 No 43 56.8 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 4355350 + NM_006515 SETMAR 1 10.79 1.04 40 8.94 72.1 25 5.39 No 12 0.73 No 24 0.95 Yes -24 0.94 Yes 46 94.77 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 4357079 + NM_006515 SETMAR 1 0.67 0.17 10 5.8 76.73 51 7.07 Yes 46 0.82 Yes 0 0 No -29 0.69 Yes 41 80.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135140364 - NM_015046 SETX 1 0.12 0.21 11 -8.34 0 13 4.24 No 8 0.86 Yes 0 0 No -37 0.74 Yes 33 67.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 135141637 - NM_015046 SETX 1 0.35 0.54 27 8.8 88.32 27 5 No 3 0.27 No 26 0.43 Yes -26 0.55 No 40 40.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 135144877 - NM_015046 SETX 1 22.03 33.13 72 6.21 86.62 21 7.38 Yes 62 0.55 No 28 0.59 Yes -26 0.74 Yes 44 71.53 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 135145078 - NM_015046 SETX 1 0.07 0.17 9 -2.56 0 22 4.58 No 9 -2.34 No 0 0 No -21 0.43 No 27 53.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135145944 - NM_015046 SETX 1 0.13 0.28 16 10.18 85.1 31 6.08 Yes 75 -3.82 No 0 0 No -30 0.45 No 40 71.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 135147222 - NM_015046 SETX 1 0.1 0.19 12 7.77 88.81 20 5.94 Yes 7 0.64 No 24 0.53 Yes -23 0.87 Yes 47 86.77 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 135150246 - NM_015046 SETX 1 0.73 1.43 47 6.11 84.54 33 5.33 No 75 1.05 Yes 0 0 No -26 0.83 Yes 44 81.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135152536 - NM_015046 SETX 1 0.49 0.63 30 3.3 0 26 8 Yes 13 1.75 Yes 0 0 No -25 0.84 Yes 45 77.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135158245 - NM_015046 SETX 1 0.49 0.61 29 3.5 79 24 6.24 Yes 50 1.6 Yes 0 0 No -23 0.94 Yes 47 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135158290 - NM_015046 SETX 1 0.35 0.46 26 7.34 82.55 18 5.66 Yes 5 1.53 Yes 0 0 No -22 0.93 Yes 48 95.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135161566 - NM_015046 SETX 1 0.18 0.32 19 6.4 88.76 26 7.55 Yes 13 1.56 Yes 0 0 No -25 0.95 Yes 45 95.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135173662 - NM_015046 SETX 1 0.83 1.83 58 6.02 87.25 21 5.16 No 59 1.06 Yes 0 0 No -20 0.85 Yes 50 86.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135176125 - NM_015046 SETX 1 0.66 0.92 39 5.22 79.37 31 5.37 No 51 -4.04 No 0 0 No -26 0.46 No 44 69.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135188032 - NM_015046 SETX 1 0.09 0.15 7 9.7 73.2 28 5.83 Yes 41 0.45 No 0 0 No -27 0.86 Yes 43 87.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 135205904 - NM_015046 SETX 1 0.09 0.17 11 1.45 71.43 31 4.5 No -4 0.19 No 25 0.92 Yes -27 0.58 No 40 53.71 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 135208738 - NM_015046 SETX 1 0.46 0.6 30 7.68 89.98 27 5.11 No 14 -0.06 No 0 0 No -60 0.41 No 10 46.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135216598 - NM_015046 SETX 1 0.06 0.11 8 1.22 0 43 7.74 Yes 48 0.02 No 0 0 No -42 0.64 No 28 54.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 135218538 - NM_015046 SETX 1 0.09 0.14 10 3.25 80.12 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.83 Yes 50 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135218541 - NM_015046 SETX 1 0.1 0.15 9 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -17 0.5 No 53 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 135218679 - NM_015046 SETX 1 1.2 1.46 41 6.79 83.55 28 5.29 No 58 0.29 No 0 0 No -27 0.5 No 19 82.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 135229013 - NM_015046 SETX 1 0.55 0.89 40 6.19 98.73 21 4.22 No 5 0.67 No 0 0 No -25 0.54 No 45 80.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 135229016 - NM_015046 SETX 1 0.53 0.79 38 6.84 85.99 18 4.01 No 2 0.7 No 0 0 No -22 0.61 No 48 84.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 135229856 - NM_015046 SETX 1 0.3 0.26 17 4.64 84.17 27 5.74 Yes 14 -0.19 No 0 0 No -26 0.72 Yes 44 12.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 64533628 - NM_001346409 SF1 1 80.77 136.54 72 6.11 85.51 26 7.62 Yes 13 1.19 Yes 25 0.95 Yes -25 0.9 Yes 45 94.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64533628 - NM_001346409 SF1 1 0.79 1.29 51 6.11 85.51 26 7.62 Yes 13 1.19 Yes 25 0.95 Yes -25 0.9 Yes 45 94.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64534445 - NM_001346409 SF1 1 0.17 0.58 25 0.35 63.98 41 7.34 Yes 66 0.85 Yes 0 0 No -40 0.49 No 30 72.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 64534719 - NM_001346409 SF1 1 6.2 18.72 72 1.18 0 32 6.16 Yes 19 1.47 Yes 26 0.93 Yes -31 0.85 Yes 39 89.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64534748 - NM_001346409 SF1 1 0.04 0.13 8 0.5 63.66 14 5.15 No 62 -3.06 No 20 0.26 Yes -41 0.65 No 29 32 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 64534833 - NM_001346409 SF1 1 0.05 0.17 10 7.53 91.06 23 4.9 No 25 0.69 No 0 0 No -22 0.68 Yes 51 70.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 64535296 - NM_001346409 SF1 1 2 13.39 72 5.42 81.02 28 5.48 No 15 1.41 Yes 0 0 No -27 0.86 Yes 43 97.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64537525 - NM_001346409 SF1 1 0.02 0.13 9 -12.43 0 23 5 No 10 1.5 Yes 0 0 No -22 0.93 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 64540978 - NM_001346409 SF1 1 10585.48 629.25 72 7.19 87.58 53 8.51 Yes 4 2.2 Yes 36 0.26 Yes -52 0.57 No 18 76.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 64545619 - NM_001346409 SF1 1 1 3.81 68 5.49 77.87 70 12.96 Yes 57 2.18 Yes 30 0.3 Yes -42 0.53 No 45 31.3 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 64545622 - NM_001346409 SF1 1 0.92 3.42 69 6.94 79.24 67 12.85 Yes 54 2.18 Yes 30 0.3 Yes -39 0.57 No 48 29.7 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 30737848 - NM_005877 SF3A1 1 0.08 0.35 18 4.57 72.6 37 6 Yes 24 1.04 Yes 28 0.29 Yes -36 0.68 Yes 34 64.65 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr22 30738564 - NM_005877 SF3A1 1 0.02 0.1 7 9.7 81.61 28 5.87 Yes 21 0.84 Yes 0 0 No -27 0.86 Yes 43 71.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2238340 + NM_007165 SF3A2 1 0.24 0.92 36 6.53 86.16 20 6.63 Yes 7 1.22 Yes 0 0 No -19 0.68 Yes 51 89.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2241458 + NM_007165 SF3A2 1 0.03 0.1 7 6.41 80.8 27 5.29 No 9 -1.45 No 0 0 No -26 0.89 Yes 44 91.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2243085 + NM_007165 SF3A2 1 0.12 0.46 27 8.67 86.13 58 7.53 Yes 56 1.56 Yes 0 0 No -33 0.68 Yes 37 69.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2246694 + NM_007165 SF3A2 1 0.06 0.24 16 -1.83 0 13 4.36 No 0 -1.15 No 0 0 No -15 0.48 No 55 48.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2247343 + NM_007165 SF3A2 1 0.05 0.15 8 7.6 77.97 26 5.48 No 50 1.4 Yes 0 0 No -23 0.87 Yes 47 90.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2247490 + NM_007165 SF3A2 1 0.05 0.15 11 7.23 84.79 25 5.29 No 36 1.08 Yes 0 0 No -24 0.95 Yes 46 96.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2247564 + NM_007165 SF3A2 1 0.07 0.24 14 -9.23 0 12 2.75 No -1 -0.75 No 27 0.65 Yes -11 0.57 No 42 37.53 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 2247777 + NM_007165 SF3A2 1 0.04 0.11 7 6.44 0 15 4.58 No 21 1.9 Yes 0 0 No -32 0.63 No 37 82.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 38423932 - NM_006802 SF3A3 1 0.03 0.13 8 -1.32 0 30 5.66 Yes 17 1.14 Yes 0 0 No -29 0.93 Yes 41 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38428273 - NM_006802 SF3A3 1 0.11 0.36 20 4.74 84.41 31 7.73 Yes 18 1.28 Yes 0 0 No -30 0.89 Yes 40 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38442624 - NM_006802 SF3A3 1 0.04 0.14 7 -2.16 81.64 27 5.39 No 14 0.45 No 0 0 No -26 0.55 No 44 58.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 38447481 - NM_006802 SF3A3 1 0.11 0.57 30 3.12 74.55 38 7.15 Yes 25 1.76 Yes 0 0 No -37 0.46 No 33 89.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 38448465 - NM_006802 SF3A3 1 0.03 0.15 8 10.04 84.41 15 5.07 No 74 0.96 Yes 0 0 No -24 0.76 Yes 46 91.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38453353 - NM_006802 SF3A3 1 0.08 0.28 16 -12.98 0 41 7.35 Yes 28 1.94 Yes 42 0.76 Yes -40 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 198257911 - NM_012433 SF3B1 1 0.09 0.67 29 -3.06 74.95 29 5.6 Yes 66 0.47 No 0 0 No -29 0.84 Yes 41 78.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 198261079 - NM_012433 SF3B1 1 0.02 0.14 8 4.43 73.97 60 5.31 No 54 0.39 No 30 0.73 Yes -50 0.44 No 26 60.78 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 198263763 - NM_012433 SF3B1 1 0.83 6.17 71 12.68 86.85 29 5.92 Yes 53 -2.36 No 33 0.31 Yes -28 0.81 Yes 42 83.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 198266160 - NM_012433 SF3B1 1 0.03 0.18 11 4.06 73.33 42 6.47 Yes 29 0.5 No 0 0 No -27 0.66 Yes 29 46.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 198272326 - NM_012433 SF3B1 1 0.02 0.13 8 8.1 83.77 32 6.08 Yes 64 0.41 No 0 0 No -36 0.38 No 38 44.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 198281660 - NM_012433 SF3B1 1 0.03 0.15 9 -0.89 0 15 4.36 No 64 -4.7 No 27 0.71 Yes -18 0.71 Yes 52 37.37 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 198283676 - NM_012433 SF3B1 1 1.13 6.85 72 -1.36 0 18 4.58 No 48 0.95 Yes 24 0.7 Yes -23 0.84 Yes 47 74.89 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 198284368 - NM_012433 SF3B1 1 0.12 0.71 36 8.95 91.19 26 6.63 Yes 13 2.16 Yes 0 0 No -25 0.88 Yes 45 96.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 198284956 - NM_012433 SF3B1 1 0.38 2.25 58 6.95 0 20 4.58 No 7 0.62 No 0 0 No -20 0.48 No 48 49.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 198285298 - NM_012433 SF3B1 1 0.02 0.14 10 0.5 75.77 41 8.93 Yes 28 1.14 Yes 22 0.95 Yes -30 0.72 Yes 40 76.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 198288697 - NM_012433 SF3B1 1 0.08 0.32 17 -12.73 0 29 5.43 No 73 -1.3 No 0 0 No -28 0.85 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 65823008 + NM_006842 SF3B2 1 7.59 18.06 72 7.18 95.65 24 7.87 Yes 11 0.49 No 20 0.41 Yes -22 0.45 No 47 50.44 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 65824739 + NM_006842 SF3B2 1 6.58 18.81 72 6.97 75.65 33 7.55 Yes 20 1.52 Yes 29 0.96 Yes -32 0.9 Yes 38 94.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 65825716 + NM_006842 SF3B2 1 0.05 0.17 11 3.38 72.76 42 4.46 No 22 1.4 Yes 0 0 No -34 0.88 Yes 36 93.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65826301 + NM_006842 SF3B2 1 0.03 0.14 9 -14.48 0 30 5.66 Yes 17 2.2 Yes 0 0 No -29 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 65826302 + NM_006842 SF3B2 1 0.03 0.11 8 -15.85 0 31 5.74 Yes 18 2.2 Yes 0 0 No -30 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 65826991 + NM_006842 SF3B2 1 0.07 0.21 14 -6.16 0 9 3.87 No 9 1.26 Yes 0 0 No -31 0.83 Yes 39 65.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 65835368 + NM_006842 SF3B2 1 0.03 0.14 10 -3.01 75.83 42 6.56 Yes 29 1.17 Yes 0 0 No -29 0.63 No 41 78.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 65835419 + NM_006842 SF3B2 1 0.87 3.99 70 -1.13 67.28 23 7.75 Yes 10 1.52 Yes 19 0.71 Yes -22 0.76 Yes 48 81.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 65835599 + NM_006842 SF3B2 1 0.11 0.5 24 -4.44 0 17 4.12 No 7 0.56 No 24 0.92 Yes -31 0.75 Yes 51 50.86 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 70558766 + NM_012426 SF3B3 1 1.76 4.67 68 5.2 85.02 18 5.39 No 72 1.13 Yes 22 0.61 Yes -17 0.64 No 53 81.78 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 70558769 + NM_012426 SF3B3 1 0.9 2.42 66 3.25 80.12 21 5.66 Yes 75 1.12 Yes 0 0 No -20 0.81 Yes 50 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70562984 + NM_012426 SF3B3 1 0.1 0.32 20 0.78 76.2 33 6.56 Yes 20 0.82 Yes 0 0 No -32 0.72 Yes 38 81.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70574337 + NM_012426 SF3B3 1 0.31 0.96 35 6.49 90.14 15 4.73 No 2 1.04 Yes 0 0 No -26 0.38 No 44 59.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 70578071 + NM_012426 SF3B3 1 0.03 0.13 7 7.34 90.02 26 5.56 Yes -1 0.73 No 0 0 No -26 0.76 Yes 44 83.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 70578344 + NM_012426 SF3B3 1 0.06 0.26 17 2.18 0 22 6.71 Yes 9 1.9 Yes 0 0 No -38 0.55 No 32 60.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 70582217 + NM_012426 SF3B3 1 0.04 0.14 8 -0.59 59.23 29 5.9 Yes 29 0.68 No 0 0 No -28 0.84 Yes 42 83.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 70582220 + NM_012426 SF3B3 1 0.05 0.22 13 3.71 75.26 32 6.14 Yes 32 0.68 No 0 0 No -31 0.79 Yes 39 78.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 70584552 + NM_012426 SF3B3 1 2.25 6.96 72 14.41 94.15 29 5.31 No 29 0.33 No 23 0.5 Yes -28 0.36 No 42 52.71 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 70588396 + NM_012426 SF3B3 1 0.63 1.93 50 2.97 60.95 40 6.75 Yes 62 2.13 Yes 0 0 No -31 0.62 No 39 69.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 70604976 + NM_012426 SF3B3 1 0.08 0.32 19 -0.7 0 16 3.87 No -4 0.13 No 25 0.93 Yes -25 0.71 Yes 45 71.09 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 24290759 - NM_016047 SF3B6 1 0.02 0.18 9 5.35 78.67 64 6.39 Yes 35 1.02 Yes 25 0.77 Yes -30 0.66 No 40 62.9 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 24291348 - NM_016047 SF3B6 1 0.07 0.71 19 1.17 67.68 20 5.28 No 74 0.01 No 24 0.85 Yes -24 0.84 Yes 46 93.95 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 31904244 + NM_001007467 SFI1 1 22.54 8.36 71 0.26 0 39 6.71 Yes 40 0.67 No 34 0.48 Yes -38 0.83 Yes 32 86.16 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 31917220 + NM_001007467 SFI1 1 1.01 0.49 26 8.97 86.85 35 6.08 Yes 76 -3.57 No 34 0.64 Yes -34 0.79 Yes 36 77.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 31934862 + NM_001007467 SFI1 1 0.45 0.13 9 3.59 75.96 29 6.62 Yes 75 1.01 Yes 0 0 No -28 0.58 No 42 72.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 31946963 + NM_001007467 SFI1 1 2.13 0.88 41 8.98 84.44 33 7.31 Yes 20 1.37 Yes 0 0 No -32 0.95 Yes 38 97.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 31953359 + NM_001007467 SFI1 1 0.26 0.11 7 8.71 86.44 30 6.4 Yes 17 1.91 Yes 0 0 No -29 0.92 Yes 41 96.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 31959755 + NM_001007467 SFI1 1 0.4 0.11 8 3.74 80.12 19 7.07 Yes 6 1.15 Yes 0 0 No -18 0.55 No 52 61.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 31973161 + NM_001007467 SFI1 1 2.71 0.82 29 2.42 76.52 44 7.39 Yes 67 0.98 Yes 0 0 No -29 0.43 No 40 51.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 31973173 + NM_001007467 SFI1 1 0.75 0.24 10 -2.51 0 16 4 No 76 0.39 No 0 0 No -21 0.59 No 28 32.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 31981058 + NM_001007467 SFI1 1 0.45 0.21 12 2.81 0 30 5.92 Yes 17 0.65 No 0 0 No -29 0.88 Yes 41 88.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 31983313 + NM_001007467 SFI1 1 0.51 0.24 14 4.37 0 28 6.15 Yes 74 -3.53 No 27 0.68 Yes -32 0.58 No 39 75.93 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr22 31999732 + NM_001007467 SFI1 1 0.8 0.17 9 -7.63 74.52 25 5.57 Yes 12 1.36 Yes 0 0 No -24 0.88 Yes 46 84.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 32007984 + NM_001007467 SFI1 1 25.88 2.44 60 10.69 91.75 32 5.79 Yes 73 1.64 Yes 22 0.65 Yes -21 0.61 No 48 82.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 32008905 + NM_001007467 SFI1 1 1.47 0.18 12 8.61 88.28 31 6.07 Yes 35 0.78 Yes 0 0 No -30 0.77 Yes 40 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 32012989 + NM_001007467 SFI1 1 0.95 0.33 22 0.17 0 31 5.57 Yes 18 0.8 Yes 26 0.9 Yes -30 0.77 Yes 50 45.48 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr22 32013413 + NM_001007467 SFI1 1 0.88 0.28 14 2.31 71.9 22 4.97 No -3 0.51 No 0 0 No -21 0.63 No 49 72.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 32014015 + NM_001007467 SFI1 1 0.55 0.13 7 0.73 69.89 37 5.36 No 38 -1.28 No 0 0 No -31 0.55 No 39 56.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52946639 - NM_016329 SFMBT1 1 0.46 0.17 11 5.45 78.07 33 5.56 Yes 67 1.89 Yes 0 0 No -27 0.41 No 51 73.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52958007 - NM_016329 SFMBT1 1 1.13 0.28 17 11.48 86.52 30 5.89 Yes 65 0.91 Yes 0 0 No -30 0.68 Yes 40 69.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52996272 - NM_016329 SFMBT1 1 0.77 0.31 15 5.47 85.66 39 7.55 Yes 44 -2.02 No 0 0 No -25 0.5 No 46 38.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53004110 - NM_016329 SFMBT1 1 0.62 0.1 7 3.28 0 36 6.39 Yes 23 1.05 Yes 0 0 No -39 0.31 No 31 54.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 53053139 - NM_016329 SFMBT1 1 1.61 0.35 21 7.38 87.25 24 5.27 No 73 0.7 No 0 0 No -23 0.89 Yes 47 78.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53077271 - NM_016329 SFMBT1 1 5.46 1.08 44 9.56 81.28 40 5.21 No 1 1.71 Yes 35 0.6 Yes -35 0.87 Yes 35 92.29 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 7213007 - NM_001018039 SFMBT2 1 1.72 0.47 28 -4.4 0 16 4.48 No 25 1.16 Yes 0 0 No -37 0.8 Yes 33 85.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7267338 - NM_001018039 SFMBT2 1 1.82 1.07 39 4.19 72.61 40 4.08 No 71 0.96 Yes 0 0 No -23 0.87 Yes 47 83.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7282425 - NM_001018039 SFMBT2 1 0.39 0.15 11 7.42 93.18 21 5 No 69 1.62 Yes 0 0 No -23 0.88 Yes 47 96.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7284949 - NM_001018039 SFMBT2 1 0.33 0.13 8 11.37 86.39 28 5.57 Yes 76 -5.1 No 0 0 No -27 0.89 Yes 43 93.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 7297206 - NM_001018039 SFMBT2 1 0.45 0.39 25 6.01 75.88 27 5.46 No 14 0.63 No 0 0 No -26 0.57 No 44 78.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 7300305 - NM_001018039 SFMBT2 1 0.31 0.29 13 -0.17 60.39 47 7.68 Yes 34 0.97 Yes 0 0 No -38 0.59 No 32 81.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 7324366 - NM_001018039 SFMBT2 1 0.08 0.1 7 7.26 80.35 20 5.81 Yes 7 1.1 Yes 0 0 No -27 0.78 Yes 43 86.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7325922 - NM_001018039 SFMBT2 1 97.72 40.1 72 4.83 81.74 29 5.66 Yes 16 0.74 No 0 0 No -28 0.56 No 42 54.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 7332796 - NM_001018039 SFMBT2 1 0.18 0.13 9 11.04 94.53 23 5.89 Yes 51 1.71 Yes 0 0 No -28 0.53 No 42 60.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 7393829 - NM_001018039 SFMBT2 1 0.55 0.32 19 10.93 100 36 6.21 Yes 50 0.8 Yes 0 0 No -35 0.36 No 46 58.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 7405977 - NM_001018039 SFMBT2 1 0.23 0.13 9 10.44 84.97 28 6.53 Yes 15 0.33 No 0 0 No -27 0.95 Yes 43 97.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 7407474 - NM_001018039 SFMBT2 1 0.24 0.1 7 0.79 0 30 5.57 Yes 2 -2 No 0 0 No -29 0.62 No 41 54.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 7407478 - NM_001018039 SFMBT2 1 3.69 2.06 60 6.74 88.62 26 5.2 No -2 -1.71 No 0 0 No -25 0.7 Yes 45 53.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 7410970 - NM_001018039 SFMBT2 1 0.23 0.18 11 6.45 86.87 24 7.54 Yes 11 0.49 No 0 0 No -23 0.77 Yes 47 77.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 7412335 - NM_001018039 SFMBT2 1 0.93 0.94 33 -0.62 75.4 31 6.63 Yes 18 0.96 Yes 0 0 No -30 0.94 Yes 40 87.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7419525 - NM_001018039 SFMBT2 1 0.2 0.21 10 10.52 79.76 32 4.96 No 19 1.39 Yes 0 0 No -31 0.65 No 39 83.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 7423137 - NM_001018039 SFMBT2 1 0.91 0.85 38 7.65 87.34 20 5 No 7 0.36 No 0 0 No -19 0.7 Yes 51 73.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 35650446 - NM_005066 SFPQ 1 0.02 0.14 8 5.12 75.97 18 7.78 Yes 5 1.02 Yes 0 0 No -29 0.85 Yes 41 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35651053 - NM_005066 SFPQ 1 0.01 0.11 7 6.35 86.17 16 4.94 No 3 1.65 Yes 0 0 No -19 0.59 No 51 61.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 35652856 - NM_005066 SFPQ 1 0.01 0.17 10 -6.8 0 19 4.8 No 66 0.38 No 21 0.86 Yes -18 0.87 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 35656627 - NM_005066 SFPQ 1 0.01 0.26 11 -2.51 74.09 26 4.03 No 76 -4.98 No 23 0.93 Yes -26 0.43 No 45 48.47 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 35657099 - NM_005066 SFPQ 1 0.08 0.5 27 -8 78.73 26 5.31 No 44 0 No 0 0 No -26 0.55 No 45 47.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 105883743 + NM_001002759 SFR1 1 0.36 0.17 12 3.41 76.7 22 5.17 No 67 -5.5 No 0 0 No -25 0.89 Yes 45 91.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 132198061 + NM_004592 SFSWAP 1 0.26 0.17 10 3.84 86.12 22 4.9 No 9 1.16 Yes 0 0 No -21 0.78 Yes 49 82.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132198899 + NM_004592 SFSWAP 1 0.69 0.5 25 5.39 84.16 50 5.4 No 13 1.55 Yes 0 0 No -25 0.89 Yes 45 87.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132223461 + NM_004592 SFSWAP 1 3.19 1.64 44 4.19 0 45 5.92 Yes 32 1.27 Yes 0 0 No -45 0.5 No 30 57.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 132238740 + NM_004592 SFSWAP 1 0.63 0.11 8 2.46 66.12 40 8.09 Yes 27 1.15 Yes 0 0 No -39 0.59 No 46 66.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 132248720 + NM_004592 SFSWAP 1 0.64 0.4 23 6.72 82.7 28 5.57 Yes 38 -3.26 No 0 0 No -27 0.84 Yes 43 50.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 132252274 + NM_004592 SFSWAP 1 0.25 0.29 17 -0.23 67.4 33 8.75 Yes 20 1.2 Yes 0 0 No -38 0.61 No 32 77.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 132256220 + NM_004592 SFSWAP 1 0.09 0.1 7 3.97 84.41 33 7.2 Yes 20 2.41 Yes 0 0 No -32 0.79 Yes 38 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132265349 + NM_004592 SFSWAP 1 0.39 0.25 12 9.34 96.25 30 6.28 Yes 30 0.87 Yes 0 0 No -30 0.47 No 37 65.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 132269617 + NM_004592 SFSWAP 1 3.48 1.99 60 8.44 81.5 30 5.04 No 17 0.57 No 29 0.61 Yes -29 0.62 No 47 55.78 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 132271818 + NM_004592 SFSWAP 1 0.46 0.24 14 7.57 91.72 27 5.29 No 39 1.67 Yes 0 0 No -26 0.93 Yes 44 93.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132274482 + NM_004592 SFSWAP 1 0.88 0.44 25 7.5 80.9 33 4.37 No 20 0.79 Yes 0 0 No -32 0.59 No 38 81.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 132281725 + NM_004592 SFSWAP 1 0.46 0.22 13 -0.66 72.93 25 5.39 No 12 1.01 Yes 0 0 No -24 0.97 Yes 46 97.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 166736451 - NR_130112 SFT2D1 1 0.03 0.19 12 5.42 76.7 23 5.92 Yes 10 0.82 Yes 0 0 No -22 0.91 Yes 48 88.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 166736534 - NR_130112 SFT2D1 1 0.31 1.74 55 1.67 66.17 22 5.35 No 9 0.62 No 0 0 No -21 0.73 Yes 49 77.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 166739655 - NR_130112 SFT2D1 1 0.03 0.13 8 -10.68 0 25 4.76 No 12 0.87 Yes 0 0 No -27 0.93 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 168195518 + NM_199344 SFT2D2 1 0.13 0.17 9 11.98 95.11 27 6.3 Yes NA NA NA 0 0 No -26 0.75 Yes 37 77.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 168198839 + NM_199344 SFT2D2 1 0.31 0.35 23 10.18 92.18 28 6.27 Yes 68 0.78 Yes 22 0.47 Yes -27 0.48 No 51 65.52 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 168201648 + NM_199344 SFT2D2 1 0.1 0.22 13 6.77 84.37 34 6.71 Yes 75 -2.73 No 0 0 No -26 0.92 Yes 44 86.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 168203156 + NM_199344 SFT2D2 1 0.07 0.17 10 7.94 82.09 25 6.16 Yes 12 1.52 Yes 0 0 No -24 0.93 Yes 46 94.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 168207167 + NM_199344 SFT2D2 1 0.45 0.43 23 9.58 98.05 14 5.16 No 1 0.44 No 0 0 No -21 0.53 No 49 70.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 174936063 + NM_001322977 SFXN1 1 2.15 5.19 71 9.67 87.86 32 5.71 Yes 54 -0.96 No 31 0.77 Yes -31 0.86 Yes 39 85.15 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 174938402 + NM_001322977 SFXN1 1 0.06 0.13 8 2.15 75.19 49 6.93 Yes 40 1.35 Yes 27 0.94 Yes -48 0.4 No 22 61.59 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 174949420 + NM_001322977 SFXN1 1 0.07 0.22 13 8.67 85.03 46 6.99 Yes 55 2.02 Yes 0 0 No -28 0.83 Yes 42 84.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 174949378 + NM_001322977 SFXN1 1 0.04 0.13 7 -9.8 0 26 6.74 Yes 13 2.05 Yes 0 0 No -25 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 174952794 + NM_001322977 SFXN1 1 0.05 0.17 10 8.58 87.44 31 5.41 No 5 0.15 No 31 0.42 Yes -30 0.61 No 40 80.62 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 104474979 + NM_178858 SFXN2 1 3.64 1.18 42 7.82 87.44 25 7.48 Yes 12 0.44 No 24 0.62 Yes -24 0.73 Yes 46 63.25 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 104475990 + NM_178858 SFXN2 1 2.19 0.71 33 8.91 84.81 22 6.96 Yes 72 1.54 Yes 21 0.63 Yes -22 0.68 Yes 48 58.51 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 104476345 + NM_178858 SFXN2 1 0.36 0.11 7 4.74 84.41 64 8.83 Yes 51 1.67 Yes 28 0.14 Yes -42 0.31 No 41 29.9 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 104476370 + NM_178858 SFXN2 1 6.16 2.13 56 6.3 90.92 28 4.07 No 76 1.64 Yes 27 0.81 Yes -27 0.44 No 43 38.07 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 104477459 + NM_178858 SFXN2 1 1.9 0.54 27 6.38 74.77 33 5.71 Yes 72 -4.9 No 28 0.37 Yes -15 0.37 No 55 20.66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 104484692 + NM_178858 SFXN2 1 3.01 0.97 41 11.02 85.86 31 9.68 Yes 37 1.11 Yes 30 0.63 Yes -30 0.88 Yes 40 85.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 104486376 + NM_178858 SFXN2 1 0.49 0.15 9 2.5 0 11 4.12 No 18 0.69 No 0 0 No -30 0.7 Yes 40 90.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 104487431 + NM_178858 SFXN2 1 6.01 1.99 54 3.01 75.22 64 9.27 Yes 51 1.88 Yes 23 0.61 Yes -51 0.41 No 19 39.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 104489079 + NM_178858 SFXN2 1 1.23 0.46 27 6.48 0 33 5.22 No 56 0.69 No 0 0 No -28 0.59 No 44 55.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 120910874 - NR_110305 SFXN4 1 0.31 0.32 17 0.76 0 39 7.28 Yes 26 2.06 Yes 0 0 No -38 0.91 Yes 32 93.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 120913687 - NR_110305 SFXN4 1 0.43 0.51 27 3.78 84.41 30 6.48 Yes 17 2.23 Yes 0 0 No -29 0.91 Yes 41 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73184233 - NM_001330406 SFXN5 1 3.91 1.26 45 4.19 75.62 26 5.29 No 38 -3.06 No 25 0.9 Yes -25 0.81 Yes 45 72.41 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 73194453 - NM_001330406 SFXN5 1 1.08 0.29 18 8.35 75.03 30 6 Yes 50 0.89 Yes 29 0.45 Yes -29 0.71 Yes 41 78.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 73236830 - NM_001330406 SFXN5 1 0.69 0.29 13 4.04 82.48 22 5.1 No 66 1.7 Yes 0 0 No -21 0.92 Yes 49 95.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 73236847 - NM_001330406 SFXN5 1 0.63 0.26 15 8.7 78.93 28 5.48 No 49 1.68 Yes 0 0 No -26 0.8 Yes 43 63.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 73252676 - NM_001330406 SFXN5 1 0.61 0.13 8 6.68 85.68 26 6.37 Yes 70 1.19 Yes 0 0 No -25 0.83 Yes 45 86.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 52898128 - NM_000232 SGCB 1 6.34 2.79 63 9.12 86.2 46 7.2 Yes 33 1.49 Yes 31 0.51 Yes -31 0.69 Yes 39 91.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 94217162 - NM_001346719 SGCE 1 0.18 0.1 7 6.62 87.7 28 5.83 Yes 76 -4.81 No 20 0.55 Yes -27 0.74 Yes 43 79.37 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 94227317 - NM_001346719 SGCE 1 2.73 1.65 54 10.29 85.05 39 4.74 No 38 0.55 No 38 0.54 Yes -38 0.93 Yes 32 92.87 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 94228282 - NM_001346719 SGCE 1 0.32 0.21 12 1.36 0 40 5.11 No 27 0.17 No 33 0.61 Yes -26 0.62 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 94248245 - NM_001346719 SGCE 1 0.26 0.15 9 4.15 69.59 32 4.33 No 23 0.09 No 0 0 No -24 0.53 No 44 36.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 94248248 - NM_001346719 SGCE 1 0.23 0.11 7 2.65 66.65 29 4.13 No 20 0.09 No 0 0 No -32 0.51 No 13 39.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 94251308 - NM_001346719 SGCE 1 1.08 0.53 30 8.19 93.74 16 4.7 No 3 0.38 No 0 0 No -20 0.43 No 51 63.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 94251939 - NM_001346719 SGCE 1 2.16 1.1 44 4.56 84.41 25 5.99 Yes 12 0.78 Yes 0 0 No -24 0.81 Yes 46 88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28588989 + NM_138414 SGF29 1 0.55 0.36 18 10.91 92.09 25 7.2 Yes 76 0.6 No 0 0 No -25 0.47 No 45 76.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 28599930 + NM_138414 SGF29 1 2.98 1.29 44 7.89 95.64 28 5.29 No 43 0.92 Yes 27 0.61 Yes -27 0.59 No 43 43.01 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 28601651 + NM_138414 SGF29 1 0.63 0.21 15 5.61 85.05 40 6.63 Yes 43 2.29 Yes 0 0 No -39 0.78 Yes 31 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28601903 + NM_138414 SGF29 1 0.95 0.46 23 9.19 86.34 13 6.07 Yes 0 0.47 No 22 0.83 Yes -23 0.59 No 40 50.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 28602361 + NM_138414 SGF29 1 2.77 1.11 46 10.53 89.8 29 6.72 Yes 43 0.71 No 0 0 No -28 0.57 No 42 77.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 52068056 - NM_147156 SGMS1 1 0.15 0.17 11 7.49 77.96 33 4.96 No 1 1.05 Yes 0 0 No -35 0.31 No 35 58.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 52088257 - NM_147156 SGMS1 1 0.34 0.24 14 7.78 86.13 30 6.21 Yes 17 1.04 Yes 0 0 No -29 0.83 Yes 41 90.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 52095476 - NM_147156 SGMS1 1 1.37 1 45 11.12 89.79 32 7.89 Yes 19 0.97 Yes 0 0 No -31 0.56 No 39 56.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 52100225 - NM_147156 SGMS1 1 1.61 1.1 43 9.23 77.81 20 7.41 Yes 51 1.35 Yes 32 0.62 Yes -32 0.59 No 38 50.6 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 52112877 - NM_147156 SGMS1 1 0.23 0.13 8 8.85 88.97 32 7.25 Yes 19 1.13 Yes 0 0 No -31 0.89 Yes 39 87.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 52205202 - NM_147156 SGMS1 1 0.19 0.13 8 4.27 74.98 28 6.86 Yes 15 0.42 No 0 0 No -30 0.83 Yes 40 83.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 52219913 - NM_147156 SGMS1 1 0.62 0.4 22 9.13 84.9 31 6.31 Yes 73 1.72 Yes 23 0.85 Yes -23 0.59 No 40 50.31 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 52268479 - NM_147156 SGMS1 1 2.07 0.42 24 10.89 85.63 28 5.56 Yes 15 0.58 No 0 0 No -27 0.81 Yes 43 80.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 52283465 - NM_147156 SGMS1 1 0.24 0.13 7 7.46 89.04 32 6.78 Yes 19 1.44 Yes 0 0 No -31 0.79 Yes 39 81.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 52344256 - NM_147156 SGMS1 1 0.36 0.21 13 4.74 84.41 29 6.28 Yes 16 1.23 Yes 0 0 No -28 0.85 Yes 42 84.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 52389302 + NR_126411 SGMS1-AS1 1 2.77 0.21 12 5.54 78.78 28 4.22 No 70 -4.51 No 38 0.82 Yes -27 0.84 Yes 43 91.36 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 52389339 + NR_126411 SGMS1-AS1 1 16.4 1.15 45 0.19 70.98 42 6.78 Yes 29 1.58 Yes 0 0 No -41 0.85 Yes 29 94.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 20212742 - NM_001199252 SGO1 1 0.33 0.18 7 4.85 71.78 39 5.67 Yes 76 0.01 No 25 0.47 Yes -44 0.56 No 27 57.08 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 201396498 + NM_001160046 SGO2 1 1.11 0.31 19 7.8 81.5 33 5.35 No 20 0.66 No 0 0 No -32 0.71 Yes 38 54.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 201397025 + NM_001160046 SGO2 1 3.25 1.32 39 12.94 95.65 44 6.78 Yes 31 1.44 Yes 0 0 No -43 0.63 No 27 80.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 201407750 + NM_001160046 SGO2 1 0.34 0.18 11 4.57 82.74 71 7.32 Yes 55 1.4 Yes 0 0 No -31 0.64 No 39 66.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 201434939 + NM_001160046 SGO2 1 0.12 0.14 7 11.11 86.62 28 4.93 No 66 0.9 Yes 0 0 No -27 0.91 Yes 43 92.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 201440040 + NM_001160046 SGO2 1 0.75 0.64 33 -2.39 0 10 4 No 57 0.77 No 0 0 No -28 0.47 No 42 38.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 72579939 + NM_003901 SGPL1 1 2.12 1.64 55 9.8 91.73 32 7.71 Yes 30 0.03 No 31 0.65 Yes -31 0.87 Yes 39 90.92 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 72604232 + NM_003901 SGPL1 1 1.89 1.39 47 2.18 80.46 64 7.03 Yes 20 1.31 Yes 26 0.35 Yes -38 0.77 Yes 38 56.06 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 72620149 + NM_003901 SGPL1 1 0.2 0.15 9 11.8 100 26 5.29 No 13 1.2 Yes 25 0.94 Yes -25 0.65 No 45 82.55 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 72631536 + NM_003901 SGPL1 1 0.15 0.11 8 8.57 82.62 31 5.91 Yes 39 0.06 No 0 0 No -30 0.87 Yes 40 92.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64158334 - NM_030791 SGPP1 1 1.41 1.83 56 6.77 86.52 32 3.98 No 65 -2.65 No 0 0 No -31 0.8 Yes 39 87.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64158471 - NM_030791 SGPP1 1 0.22 0.31 19 5.95 91.23 34 3.5 No 8 0.95 Yes 0 0 No -31 0.22 No 37 39.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 64169425 - NM_030791 SGPP1 1 0.21 0.22 14 8.65 86.44 13 6.6 Yes 0 0.43 No 0 0 No -29 0.53 No 41 66.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64183185 - NM_030791 SGPP1 1 1.94 2.24 61 3.75 84.95 21 5.14 No 8 1.18 Yes 0 0 No -20 0.5 No 14 32.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 223339559 + NM_001320833 SGPP2 1 0.06 0.15 10 8.16 82.64 52 7.48 Yes 63 0.91 Yes 0 0 No -36 0.5 No 34 60.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 223361992 + NM_001320833 SGPP2 1 0.12 0.28 20 10.62 88.27 38 6.63 Yes 25 0.38 No 0 0 No -37 0.65 No 33 76.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 223369878 + NM_001320833 SGPP2 1 0.28 0.6 29 7.68 92.24 32 4.21 No 9 0.44 No 0 0 No -21 0.88 Yes 49 88.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 223375557 + NM_001320833 SGPP2 1 0.12 0.26 16 12.5 96.42 23 4.08 No 7 0.29 No 0 0 No -22 0.59 No 48 53.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 223382010 + NM_001320833 SGPP2 1 0.1 0.24 14 0.82 70.06 40 7.99 Yes 27 1.83 Yes 0 0 No -39 0.82 Yes 31 89.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 223386469 + NM_001320833 SGPP2 1 0.08 0.21 10 -1.25 0 17 4.47 No 18 0.53 No 0 0 No -34 0.57 No 36 58.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 223387422 + NM_001320833 SGPP2 1 0.39 0.53 32 5.21 79.1 50 6.75 Yes 70 1.28 Yes 0 0 No -33 0.63 No 25 66.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 223400148 + NM_001320833 SGPP2 1 0.23 0.47 22 4.61 75.3 35 4.65 No 60 0.43 No 0 0 No -32 0.58 No 38 68.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 78184533 - NM_000199 SGSH 1 2.79 0.31 14 9.96 85.52 14 5.81 Yes 1 1.72 Yes 0 0 No -20 0.3 No 50 60.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 78185723 - NM_000199 SGSH 1 6.14 0.65 30 7.21 83.63 16 4.17 No 75 0.83 Yes 29 0.79 Yes -29 0.35 No 16 48.53 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 78185746 - NM_000199 SGSH 1 1.8 0.21 10 -6.74 0 32 7.66 Yes 52 0.83 Yes 29 0.79 Yes -31 0.62 No 39 73.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 78188583 - NM_000199 SGSH 1 0.85 0.1 7 -1.54 71.04 17 4.69 No 50 -4.1 No 22 0.4 Yes -16 0.61 No 54 51.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 78188932 - NM_000199 SGSH 1 0.97 0.13 9 -3.16 0 14 3.87 No 12 0.93 Yes 0 0 No -24 0.9 Yes 46 91.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 78191027 - NM_000199 SGSH 1 1 0.14 9 6.65 78.23 30 5.48 No 17 1.15 Yes 29 0.81 Yes -29 0.89 Yes 41 96.07 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 2245170 + NM_014853 SGSM2 1 4 0.44 25 4.14 84.84 24 6.24 Yes 48 -0.61 No 0 0 No -26 0.51 No 47 46.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 2247816 + NM_014853 SGSM2 1 0.69 0.15 8 7.56 83.46 18 5.28 No 64 -3.06 No 0 0 No -22 0.87 Yes 48 91.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 2247819 + NM_014853 SGSM2 1 0.84 0.21 12 5.83 79.7 10 5.66 Yes -3 0.43 No 0 0 No -25 0.88 Yes 45 92.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 2265711 + NM_014853 SGSM2 1 0.67 0.11 7 7.34 75.76 28 6.24 Yes 15 1.61 Yes 0 0 No -27 0.89 Yes 43 88.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2266727 + NM_014853 SGSM2 1 0.88 0.22 13 -6.04 0 17 4.24 No 4 0.18 No 20 0.92 Yes -16 0.8 Yes 54 44.05 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 2267273 + NM_014853 SGSM2 1 2.54 0.61 31 8.38 81.7 24 5.25 No 68 1.31 Yes 22 0.77 Yes -28 0.69 Yes 43 72.37 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 2267293 + NM_014853 SGSM2 1 0.56 0.18 13 4.27 84.3 12 4.72 No 39 0.8 Yes 22 0.77 Yes -22 0.58 No 48 46.28 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 2267604 + NM_014853 SGSM2 1 1.26 0.21 11 -7.13 0 27 6.56 Yes 14 1.22 Yes 0 0 No -31 0.56 No 39 62.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2268796 + NM_014853 SGSM2 1 10.64 0.74 34 7.93 88.16 22 5.29 No 24 1.17 Yes 0 0 No -21 0.93 Yes 49 92.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2270332 + NM_014853 SGSM2 1 4.12 0.28 17 9.77 82.42 42 7.85 Yes 29 1.16 Yes 0 0 No -31 0.59 No 29 76.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 2270458 + NM_014853 SGSM2 1 6.09 0.4 23 11.93 88.12 46 6.88 Yes 38 -0.02 No 0 0 No -21 0.41 No 24 59.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 2275440 + NM_014853 SGSM2 1 0.86 0.18 13 10.56 84.91 40 6.24 Yes 38 1.18 Yes 19 0.88 Yes -24 0.65 No 34 61.58 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 2276049 + NM_014853 SGSM2 1 1.36 0.19 13 6.74 79.78 42 6.84 Yes 39 1.01 Yes 0 0 No -40 0.46 No 26 59.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2279434 + NM_014853 SGSM2 1 4.16 0.86 40 2.34 0 32 4.44 No 57 0.9 Yes 0 0 No -24 0.72 Yes 46 69.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 2280257 + NM_014853 SGSM2 1 0.52 0.19 10 2.33 0 24 6 Yes 11 0.97 Yes 0 0 No -23 0.75 Yes 47 68.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 2282705 + NM_014853 SGSM2 1 0.53 0.17 12 8.98 78.54 41 6.31 Yes 32 0.47 No 24 0.8 Yes -33 0.7 Yes 38 81.95 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 2283558 + NM_014853 SGSM2 1 0.8 0.25 11 7.49 74.23 21 6.02 Yes NA NA NA 25 0.57 Yes -31 0.45 No 30 48.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 40796704 + NM_015705 SGSM3 1 0.15 0.15 9 3.61 0 31 6.41 Yes 18 1.42 Yes 0 0 No -30 0.51 No 40 71.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 40800253 + NM_015705 SGSM3 1 1.06 0.89 40 0.16 76.05 37 6.97 Yes 67 -1.42 No 0 0 No -42 0.57 No 26 79.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 40800312 + NM_015705 SGSM3 1 5.21 4.28 68 -0.69 0 19 4.58 No 6 0.19 No 0 0 No -18 0.94 Yes 52 90.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 40800943 + NM_015705 SGSM3 1 0.18 0.19 13 7 82.77 13 5.54 No 44 -4.47 No 0 0 No -24 0.55 No 46 63.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 40801097 + NM_015705 SGSM3 1 0.53 0.56 28 6.96 88.25 13 5.99 Yes 59 0.17 No 0 0 No -29 0.27 No 52 36.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 40801682 + NM_015705 SGSM3 1 0.21 0.14 7 0 82.25 33 6.24 Yes 68 -0.05 No 0 0 No -23 0.49 No 43 31.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 40801747 + NM_015705 SGSM3 1 0.26 0.18 10 7.64 82.03 33 5.91 Yes 32 0.67 No 0 0 No -32 0.74 Yes 38 78.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 40803429 + NM_015705 SGSM3 1 0.77 0.69 36 -7.93 0 20 4.3 No 43 2.23 Yes 0 0 No -55 0.73 Yes 15 63.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 40804777 + NM_015705 SGSM3 1 7.19 6.97 72 1.51 77.4 21 4.8 No 8 0.65 No 22 0.67 Yes -20 0.91 Yes 50 78.48 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 40805202 + NM_015705 SGSM3 1 3.27 1.92 59 3.15 72.55 24 5.29 No 59 0.38 No 0 0 No -21 0.44 No 19 49.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 40805206 + NM_015705 SGSM3 1 0.28 0.15 9 -2.89 0 28 5.66 Yes 63 0.37 No 0 0 No -25 0.41 No 15 44.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 40805260 + NM_015705 SGSM3 1 1.99 1.08 42 -1.49 0 10 4 No 69 -2.61 No 0 0 No -30 0.68 Yes 26 60.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 40805343 + NM_015705 SGSM3 1 3.52 1.93 56 8.92 83.8 23 5.39 No 76 -1.04 No 25 0.84 Yes -22 0.84 Yes 48 82.45 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 40805694 + NM_015705 SGSM3 1 0.19 0.15 9 -6.84 0 13 4.24 No 54 -3.24 No 0 0 No -29 0.87 Yes 41 75.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 40806135 + NM_015705 SGSM3 1 2.41 1.76 57 8.88 87.96 29 5.46 No 33 0.49 No 0 0 No -28 0.6 No 42 60.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2757446 - NM_003021 SGTA 1 0.09 0.18 12 -6.47 0 19 3.7 No 22 0.72 No 0 0 No -34 0.8 Yes 36 89.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2765273 - NM_003021 SGTA 1 0.11 0.17 8 -6.6 0 19 4.47 No 54 2.12 Yes 0 0 No -44 0.76 Yes 26 64.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2767216 - NM_003021 SGTA 1 0.1 0.22 13 -11.63 62.99 23 6.15 Yes 52 -1.74 No 0 0 No -31 0.59 No 39 43.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2767617 - NM_003021 SGTA 1 0.07 0.13 8 7.61 83.33 18 5.29 No 5 1.79 Yes 0 0 No -21 0.53 No 53 66.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 2771027 - NM_003021 SGTA 1 0.15 0.18 11 5.77 85.59 22 3.53 No 54 1.15 Yes 0 0 No -22 0.8 Yes 48 62.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2779919 - NM_003021 SGTA 1 0.18 0.22 15 9.97 88.27 21 5.74 Yes 8 1.61 Yes 0 0 No -20 0.84 Yes 50 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2782657 - NM_003021 SGTA 1 0.29 0.28 16 5.97 73.33 14 5.47 No 33 -0.98 No 29 0.65 Yes -29 0.74 Yes 41 64.26 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 2782746 - NM_003021 SGTA 1 0.98 1.17 46 -0.2 65.92 37 6.55 Yes 57 1.72 Yes 0 0 No -36 0.43 No 34 52.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 64987755 - NM_019072 SGTB 1 0.48 0.18 10 7.63 85.05 31 8.38 Yes 18 1.62 Yes 0 0 No -30 0.54 No 40 55.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 65000624 - NM_019072 SGTB 1 2.06 0.83 36 6.29 86.59 25 4.91 No 41 -2.22 No 0 0 No -21 0.88 Yes 49 91.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 65001277 - NM_019072 SGTB 1 0.56 0.21 13 7.53 84.59 34 8.52 Yes 21 1.86 Yes 0 0 No -33 0.87 Yes 37 93.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65008881 - NM_019072 SGTB 1 0.2 0.11 7 -0.53 0 20 4.3 No 30 1.58 Yes 0 0 No -42 0.73 Yes 28 93.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65016679 - NM_019072 SGTB 1 0.61 0.14 8 -1.47 0 105 9.95 Yes 16 1.89 Yes 24 0.92 Yes -28 0.61 No 42 51.22 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 28878694 + NM_015503 SH2B1 1 4.26 1.89 60 9.66 87.43 26 5.24 No 37 1.33 Yes 25 0.95 Yes -25 0.94 Yes 45 92.58 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 28880505 + NM_015503 SH2B1 1 1.24 0.6 29 6.06 85.1 14 5.33 No 63 1.71 Yes 25 0.69 Yes -21 0.95 Yes 49 95.22 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 28880597 + NM_015503 SH2B1 1 0.18 0.1 7 2.77 81.27 39 7.75 Yes 26 1.65 Yes 38 0.16 Yes -38 0.58 No 32 59.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 28882029 + NM_015503 SH2B1 1 1.27 0.46 23 3.39 0 88 6.4 Yes 38 0.45 No 0 0 No -35 0.39 No 35 43.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28882049 + NM_015503 SH2B1 1 0.65 0.22 14 5.86 89.35 27 5.38 No 58 0.45 No 0 0 No -26 0.77 Yes 44 45.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 28883527 + NM_015503 SH2B1 1 4.18 0.86 38 9.03 92.46 21 5.1 No 40 2.49 Yes 0 0 No -52 0.48 No 50 69.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 101958171 + NM_020979 SH2B2 1 0.45 0.4 23 5.32 75.48 25 5.79 Yes 12 0.73 No 0 0 No -27 0.86 Yes 43 73.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 101961103 + NM_020979 SH2B2 1 0.24 0.1 7 7.66 71.02 23 5.39 No 10 0.93 Yes 0 0 No -22 0.93 Yes 48 92.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 111884925 + NM_001291424 SH2B3 1 16.47 15.06 72 1.34 0 20 4.57 No 24 1.9 Yes 23 0.91 Yes -19 0.77 Yes 50 69.28 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 111884966 + NM_001291424 SH2B3 1 0.16 0.14 7 1.34 79.52 14 5 No 65 1.85 Yes 0 0 No -20 0.58 No 50 64.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 156779603 - NM_001161444 SH2D2A 1 2.08 0.28 18 5.82 87.22 20 5.1 No 44 1.35 Yes 22 0.78 Yes -19 0.82 Yes 51 85.65 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 6754944 - NM_005490 SH2D3A 1 35.93 4.08 68 7.32 76.4 51 7.41 Yes 17 1.23 Yes 29 0.41 Yes -50 0.46 No 20 78.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 6755324 - NM_005490 SH2D3A 1 4.53 0.5 25 -2.32 63.35 26 7.63 Yes 13 1.84 Yes 0 0 No -25 0.85 Yes 45 69.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130507352 - NM_170600 SH2D3C 1 0.75 0.24 14 8.54 80.57 26 6 Yes 13 1.83 Yes 0 0 No -25 0.52 No 45 55.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 130529551 - NM_170600 SH2D3C 1 5.06 1.6 51 11.47 93.18 36 6.24 Yes 23 0.87 Yes 0 0 No -35 0.74 Yes 35 79.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130536745 - NM_170600 SH2D3C 1 0.5 0.15 9 -7.56 69.48 33 6.95 Yes 20 1.83 Yes 0 0 No -32 0.82 Yes 38 70.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130537340 - NM_170600 SH2D3C 1 1.44 0.57 27 6.61 90.92 28 5.29 No 45 1.1 Yes 0 0 No -60 0.43 No 10 82.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 130537365 - NM_170600 SH2D3C 1 1.95 0.57 31 3.43 83.86 33 6.86 Yes 20 1.12 Yes 0 0 No -35 0.91 Yes 35 94.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130540564 - NM_170600 SH2D3C 1 2.68 0.86 39 9.92 98.16 26 6.52 Yes 73 0.83 Yes 0 0 No -25 0.43 No 45 43.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 80457935 + NM_003022 SH3BGRL 1 0.72 3.22 68 9.55 84.59 23 9.05 Yes 67 1.95 Yes 31 0.74 Yes -22 0.8 Yes 39 89.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 80467272 + NM_003022 SH3BGRL 1 0.11 0.54 28 0.87 64.34 53 8.45 Yes 71 -0.98 No 0 0 No -26 0.36 No 18 64.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 80492616 + NM_003022 SH3BGRL 1 0.16 0.76 35 6.69 79.89 37 5.76 Yes 10 0.15 No 0 0 No -27 0.44 No 39 39.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 80526902 + NM_003022 SH3BGRL 1 0.04 0.21 13 8.68 85.73 19 5.39 No 6 0.94 Yes 0 0 No -23 0.65 No 52 82.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 80526905 + NM_003022 SH3BGRL 1 0.04 0.17 11 8.9 97.81 22 5.66 Yes 9 0.91 Yes 0 0 No -21 0.76 Yes 49 89.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 80532519 + NM_003022 SH3BGRL 1 0.05 0.25 17 4.95 76.47 24 5.17 No 72 0.73 No 0 0 No -24 0.77 Yes 46 61.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 80548797 + NM_003022 SH3BGRL 1 0.04 0.21 12 8.03 92.54 27 5.91 Yes 14 0.99 Yes 0 0 No -26 0.92 Yes 44 94.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26607497 + NM_031286 SH3BGRL3 1 0.05 0.28 17 -0.29 68.48 16 5.29 No 3 -1.16 No 0 0 No -25 0.71 Yes 45 61.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 26607519 + NM_031286 SH3BGRL3 1 0.29 1.65 57 8.72 84.86 29 3.95 No 25 -1.35 No 26 0.9 Yes -21 0.43 No 42 56.34 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 38040682 + NM_018957 SH3BP1 1 0.15 0.21 11 2.66 77.78 24 6.48 Yes 11 1.7 Yes 0 0 No -23 0.87 Yes 47 90.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38040855 + NM_018957 SH3BP1 1 0.07 0.1 7 7.16 85.43 23 5.39 No 10 1.09 Yes 23 0.94 Yes -22 0.91 Yes 48 91.53 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 38041338 + NM_018957 SH3BP1 1 0.21 0.28 15 -0.91 59.98 40 6.7 Yes 6 0.5 No 19 0.76 Yes -18 0.73 Yes 52 55.91 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 38049965 + NM_018957 SH3BP1 1 0.57 0.25 15 8.77 87.02 21 5.2 No 70 -3.66 No 0 0 No -20 0.66 Yes 50 46.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 38051932 + NM_018957 SH3BP1 1 3.86 1.71 55 8.62 85.15 63 9.49 Yes 50 2.31 Yes 24 0.78 Yes -19 0.47 No 46 61.22 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 2825121 + NM_003023 SH3BP2 1 2.64 1.92 61 7.02 91.02 61 8.36 Yes 48 1.89 Yes 22 0.91 Yes -22 0.64 No 48 56.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 2825125 + NM_003023 SH3BP2 1 0.25 0.15 11 3.48 0 65 8.59 Yes 52 1.88 Yes 0 0 No -26 0.6 No 48 68.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 2826836 + NM_003023 SH3BP2 1 0.59 0.38 22 5.71 75.22 53 7.19 Yes 63 -4.61 No 23 0.82 Yes -27 0.63 No 54 36.58 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 2826875 + NM_003023 SH3BP2 1 0.44 0.28 15 5.12 84.45 27 5.48 No 19 0.25 No 0 0 No -31 0.51 No 39 44.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 2834573 + NM_003023 SH3BP2 1 1.82 0.92 36 11.8 91.48 28 5.83 Yes 50 0.22 No 0 0 No -27 0.44 No 43 67.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 2834647 + NM_003023 SH3BP2 1 3.48 1.68 54 8.54 78.31 25 6.16 Yes 12 1.07 Yes 0 0 No -24 0.91 Yes 46 89.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 15314913 - NM_004844 SH3BP5 1 1.08 0.88 35 11.4 86.13 28 6.31 Yes 15 0.4 No 27 0.93 Yes -27 0.83 Yes 43 87.73 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 15334353 - NM_004844 SH3BP5 1 0.18 0.15 8 12.9 88.27 34 5.82 Yes 21 1.53 Yes 0 0 No -33 0.5 No 37 71.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 15345807 - NM_004844 SH3BP5 1 0.67 0.57 28 9.81 84.39 15 4.34 No 2 1.25 Yes 27 0.51 Yes -26 0.46 No 44 62.26 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 249107290 - NM_001322462 SH3BP5L 1 0.44 0.19 11 6.76 77.55 19 5.39 No 57 -4.26 No 0 0 No -18 0.73 Yes 52 75.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 249107445 - NM_001322462 SH3BP5L 1 2.58 1.22 48 10.12 86.33 32 4.93 No 73 0.64 No 0 0 No -30 0.68 Yes 40 71.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 249107800 - NM_001322462 SH3BP5L 1 0.25 0.13 9 8.28 86.45 24 5.1 No -4 0.79 Yes 0 0 No -21 0.38 No 49 61.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36775111 + NM_001162530 SH3D21 1 6.02 0.35 20 7.19 84.13 43 6.75 Yes -4 1.09 Yes 22 0.52 Yes -22 0.86 Yes 48 87.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 4366568 - NM_001199944 SH3GL1 1 0.25 0.25 13 2.33 79.73 25 6.08 Yes 12 -0.06 No 0 0 No -24 0.95 Yes 46 93.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 4383983 - NM_001199944 SH3GL1 1 0.59 0.26 12 6.9 87.49 31 5.56 Yes 57 1.43 Yes 0 0 No -24 0.64 No 46 78.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 4390211 - NM_001199944 SH3GL1 1 1.09 0.56 28 9.44 76.87 22 5.35 No 72 0.89 Yes 0 0 No -34 0.64 No 36 63.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 4396369 - NM_001199944 SH3GL1 1 0.28 0.15 9 6.36 90.92 28 5.29 No 66 0.24 No 0 0 No -27 0.77 Yes 43 59.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 87183910 + NM_001206651 SH3GLB1 1 0.14 0.44 25 7.76 85.4 23 5.83 Yes 10 1.25 Yes 0 0 No -22 0.84 Yes 48 90.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 87185196 + NM_001206651 SH3GLB1 1 0.05 0.17 10 -0.65 0 10 4 No 8 1.4 Yes 0 0 No -26 0.6 No 44 68.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 87189511 + NM_001206651 SH3GLB1 1 0.08 0.31 16 9.04 88.96 25 5.57 Yes 69 0.32 No 0 0 No -24 0.74 Yes 46 81.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 87189511 + NM_001206651 SH3GLB1 1 0.14 0.54 25 9.04 88.96 25 5.57 Yes 69 0.32 No 0 0 No -24 0.74 Yes 46 81.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 87189999 + NM_001206651 SH3GLB1 1 0.03 0.13 7 -3.35 0 29 6.46 Yes 42 0.68 No 0 0 No -35 0.54 No 35 71.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 87204343 + NM_001206651 SH3GLB1 1 0.31 1.18 45 10.68 87.07 31 5.57 Yes 58 -1.87 No 25 0.69 Yes -25 0.81 Yes 45 87.96 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 131773045 - NM_001287045 SH3GLB2 1 0.83 0.44 23 -6.79 0 16 3.34 No 54 0.85 Yes 0 0 No -19 0.29 No 51 54.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131776780 - NM_001287045 SH3GLB2 1 0.17 0.14 10 0.31 71.47 29 6.56 Yes 16 1.56 Yes 26 0.54 Yes -28 0.98 Yes 42 95.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 131778140 - NM_001287045 SH3GLB2 1 0.4 0.24 16 2.72 0 49 5.9 Yes 62 0.58 No 37 0.3 Yes -36 0.37 No 34 47.43 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 131778144 - NM_001287045 SH3GLB2 1 1.51 0.83 36 7.32 84.42 45 5.73 Yes 73 0.95 Yes 37 0.3 Yes -32 0.41 No 38 44.08 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 131781004 - NM_001287045 SH3GLB2 1 0.64 0.32 19 3.25 80.12 21 7.21 Yes 8 1.2 Yes 0 0 No -20 0.78 Yes 50 86.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131781007 - NM_001287045 SH3GLB2 1 0.59 0.32 16 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -17 0.42 No 53 79.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 131781168 - NM_001287045 SH3GLB2 1 0.23 0.14 9 3.97 84.41 26 6.78 Yes 13 1.38 Yes 0 0 No -25 0.67 Yes 45 93.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131782319 - NM_001287045 SH3GLB2 1 0.79 0.44 24 5.64 85.02 19 6.24 Yes 6 1.86 Yes 0 0 No -18 0.71 Yes 52 87.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131784627 - NM_001287045 SH3GLB2 1 0.69 0.33 21 5.18 75.25 34 5.85 Yes 21 0.99 Yes 0 0 No -27 0.64 No 43 66.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 19560194 - NM_031892 SH3KBP1 1 0.06 0.25 14 5.9 76.69 39 6.52 Yes 26 1.14 Yes 0 0 No -38 0.9 Yes 32 95.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 19567638 - NM_031892 SH3KBP1 1 0.09 0.42 25 9 80.94 44 7.32 Yes 17 0.73 No 0 0 No -29 0.63 No 41 75.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 19573571 - NM_031892 SH3KBP1 1 0.05 0.19 12 10.05 86.33 38 6.09 Yes 25 2.12 Yes 0 0 No -24 0.77 Yes 46 83.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 19606917 - NM_031892 SH3KBP1 1 0.16 0.64 30 -8.6 0 45 7.72 Yes 56 0.78 Yes 0 0 No -44 0.93 Yes 26 98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 19606920 - NM_031892 SH3KBP1 1 0.04 0.17 10 -16.79 0 42 7.54 Yes 53 0.78 Yes 0 0 No -41 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 19609206 - NM_031892 SH3KBP1 1 0.21 0.79 40 10.26 89.29 27 4.67 No 76 -5.22 No 0 0 No -27 0.69 Yes 43 81.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 19619769 - NM_031892 SH3KBP1 1 0.05 0.22 14 7.47 84.92 34 5.83 Yes 21 1.3 Yes 33 0.57 Yes -33 0.83 Yes 37 88.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 19682903 - NM_031892 SH3KBP1 1 0.03 0.24 14 7.76 94.02 40 6.17 Yes 70 0.91 Yes 0 0 No -21 0.59 No 46 54.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 19682958 - NM_031892 SH3KBP1 1 0.1 0.63 29 8.56 90.94 49 8.66 Yes 36 1.06 Yes 0 0 No -27 0.64 No 33 76.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 19705810 - NM_031892 SH3KBP1 1 0.56 2.42 62 8.1 87.08 95 9.72 Yes 0 0.95 Yes 27 0.23 Yes -50 0.52 No 32 26.88 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 19713170 - NM_031892 SH3KBP1 1 0.7 3 67 9.47 97.49 19 4.84 No 44 0.5 No 24 0.61 Yes -18 0.69 Yes 52 74.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 19717855 - NM_031892 SH3KBP1 1 0.09 0.18 11 8.39 81.95 29 5.57 Yes 16 0.64 No 0 0 No -28 0.96 Yes 42 94.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 19719082 - NM_031892 SH3KBP1 1 0.17 0.36 22 8.8 83.61 25 6.13 Yes 12 1.11 Yes 0 0 No -29 0.59 No 41 68.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 19738207 - NM_031892 SH3KBP1 1 0.96 3.81 66 6.1 88.43 21 4.8 No 8 1 Yes 0 0 No -20 0.92 Yes 50 94.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 19774211 - NM_031892 SH3KBP1 1 0.03 0.1 7 8.69 90.37 26 6.85 Yes 13 0.93 Yes 0 0 No -26 0.76 Yes 39 59.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 19856978 - NM_031892 SH3KBP1 1 0.23 0.35 19 8.51 91.74 27 5.17 No 71 1.02 Yes 0 0 No -26 0.63 No 44 42.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 105367794 - NM_014631 SH3PXD2A 1 0.38 0.15 10 6.92 87.8 25 5.1 No 12 0.02 No 0 0 No -24 0.54 No 46 73.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 105393920 - NM_014631 SH3PXD2A 1 1.38 0.53 25 11.99 92.73 25 5.57 Yes 12 0.69 No 0 0 No -29 0.58 No 45 58.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 105420623 - NM_014631 SH3PXD2A 1 0.51 0.24 12 6.29 86.88 16 5.48 No 3 -0.94 No 0 0 No -26 0.9 Yes 44 82.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 170037776 - NM_020870 SH3RF1 1 0.21 0.11 7 0.35 0 16 3.48 No 60 1.21 Yes 0 0 No -39 0.56 No 31 65.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 170066903 - NM_020870 SH3RF1 1 0.45 0.21 12 4.9 78.07 39 5.13 No 10 0.19 No 0 0 No -23 0.37 No 48 30.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 170070525 - NM_020870 SH3RF1 1 0.39 0.21 13 8.31 89.62 24 5.37 No 35 0.94 Yes 0 0 No -28 0.43 No 50 48.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 8206509 + NR_134639 SH3TC1 1 2.43 1 36 10.74 89.1 28 6.71 Yes 34 0.43 No 27 0.57 Yes -27 0.8 Yes 43 71.62 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 8216898 + NR_134639 SH3TC1 1 0.78 0.65 30 5.48 81.07 33 7 Yes 20 1 Yes 32 0.88 Yes -32 0.91 Yes 38 95.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 8217272 + NR_134639 SH3TC1 1 0.28 0.25 12 13.01 88.18 19 5.46 No 73 0.51 No 0 0 No -24 0.57 No 46 80.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 8226907 + NR_134639 SH3TC1 1 0.85 0.86 34 -4.13 0 9 3.87 No 20 1.22 Yes 0 0 No -32 0.91 Yes 38 93.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 8228687 + NR_134639 SH3TC1 1 1.97 1.75 57 6.27 80.81 25 6.16 Yes -2 0.64 No 24 0.94 Yes -24 0.97 Yes 46 96.5 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 8231882 + NR_134639 SH3TC1 1 0.36 0.24 13 6.79 89.53 23 4.89 No 50 0.82 Yes 0 0 No -26 0.75 Yes 44 84.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 8234134 + NR_134639 SH3TC1 1 1.74 1.79 56 5.86 73.49 39 7.91 Yes 26 1.35 Yes 38 0.81 Yes -38 0.65 No 32 91.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 8234297 + NR_134639 SH3TC1 1 0.92 0.86 40 10.45 87.02 23 4.84 No 41 1.21 Yes 22 0.65 Yes -26 0.57 No 44 54.42 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 8234433 + NR_134639 SH3TC1 1 1.92 2.07 59 8.99 81.31 29 7.41 Yes 16 0.72 No 28 0.93 Yes -28 0.89 Yes 42 86.27 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 8237187 + NR_134639 SH3TC1 1 0.2 0.28 16 4.88 77.17 23 5.29 No 18 -2.3 No 0 0 No -23 0.33 No 47 50.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 224921 - NR_104226 SH3YL1 1 62.37 8.89 72 10.34 95.26 40 5.06 No 27 0.72 No 23 0.69 Yes -39 0.49 No 31 53.83 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 145153893 - NR_038270 SHARPIN 1 4.27 0.68 32 2.18 0 28 4.56 No NA NA NA 0 0 No -25 0.68 Yes 42 71.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145154025 - NR_038270 SHARPIN 1 2.37 0.35 21 5.23 74.88 18 7.79 Yes 74 0.62 No 0 0 No -35 0.61 No 35 62.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145154103 - NR_038270 SHARPIN 1 32.25 4.85 72 0.89 0 9 3.87 No 10 1.15 Yes 0 0 No -22 0.72 Yes 48 71.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145154109 - NR_038270 SHARPIN 1 371.54 56.65 72 2.45 78.46 17 4.8 No 4 1.19 Yes 25 0.53 Yes -16 0.59 No 54 66.51 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 145154306 - NR_038270 SHARPIN 1 1.93 1.21 50 3.43 80.69 21 5 No 46 0.82 Yes 0 0 No -20 0.91 Yes 50 91.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145154745 - NR_038270 SHARPIN 1 0.58 0.5 27 -2.51 68.01 30 5.83 Yes 17 1.29 Yes 0 0 No -29 0.84 Yes 41 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145154969 - NR_038270 SHARPIN 1 0.76 0.74 37 0.32 0 20 4.82 No 0 -0.05 No 0 0 No -25 0.7 Yes 45 80.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154936845 - NM_001130041 SHC1 1 0.25 0.26 16 5.9 87 25 7.75 Yes 12 1.33 Yes 24 0.92 Yes -24 0.91 Yes 46 95.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 154938557 - NM_001130041 SHC1 1 177.42 54.51 72 3.07 82.65 25 4.9 No 64 -3.74 No 24 0.85 Yes -24 0.67 Yes 46 63.62 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 154939021 - NM_001130041 SHC1 1 1.03 0.9 37 4.8 76.27 59 7.84 Yes 65 -1.01 No 23 0.63 Yes -40 0.59 No 30 82.5 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 154941005 - NM_001130041 SHC1 1 0.3 0.22 13 4.82 76.1 21 4.61 No 2 1.86 Yes 0 0 No -23 0.67 Yes 47 63.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 154945985 - NM_001130041 SHC1 1 7.73 2.14 62 7.93 85.05 59 7.68 Yes 46 1 Yes 30 0.67 Yes -30 0.66 Yes 40 85.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 154946522 - NM_001130041 SHC1 1 4.27 1.08 47 2.04 74.2 40 8.42 Yes 27 0.52 No 0 0 No -39 0.7 Yes 31 85.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 46654810 - NR_136738 SHCBP1 1 0.13 0.11 8 -13.17 59.67 35 6.32 Yes 22 0.59 No 0 0 No -34 0.91 Yes 36 94.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 46654813 - NR_136738 SHCBP1 1 3.07 2.74 63 4.65 78.92 32 6.08 Yes 19 0.58 No 31 0.94 Yes -31 0.92 Yes 39 94.4 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 48509617 - NM_001272066 SHISA5 1 0.61 1.71 56 4.04 61.65 46 5 No 62 0.93 Yes 40 0.39 Yes -40 0.53 No 30 54.15 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 48510920 - NM_001272066 SHISA5 1 0.24 0.79 40 5.62 80.8 46 7.27 Yes 60 1.58 Yes 0 0 No -27 0.47 No 36 37.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 48518501 - NM_001272066 SHISA5 1 0.66 0.28 16 9.52 75.46 47 7.21 Yes 34 0.51 No 31 0.03 Yes -46 0.66 No 24 81.46 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 41084028 + NM_138392 SHKBP1 1 0.45 1.18 46 5.43 65.03 29 5.91 Yes 2 1.33 Yes 28 0.9 Yes -28 0.9 Yes 42 92.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 41084353 + NM_138392 SHKBP1 1 0.23 0.49 26 -4.9 0 17 4.12 No 4 1.27 Yes 28 0.6 Yes -16 0.77 Yes 54 77.87 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 41089309 + NM_138392 SHKBP1 1 0.06 0.14 8 -1.4 0 15 3.87 No 61 -2.61 No 0 0 No -29 0.94 Yes 41 93.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 41092649 + NM_138392 SHKBP1 1 1.22 2.18 63 7.44 85.24 64 10.1 Yes 51 2.68 Yes 19 0.77 Yes -26 0.52 No 36 15.09 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 41096638 + NM_138392 SHKBP1 1 0.11 0.11 8 6.54 81.21 45 6.06 Yes 13 2.49 Yes 22 0.95 Yes -25 0.89 Yes 45 89.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 41096638 + NM_138392 SHKBP1 1 0.26 0.29 14 6.54 81.21 45 6.06 Yes 13 2.49 Yes 22 0.95 Yes -25 0.89 Yes 45 89.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 41096580 + NM_138392 SHKBP1 1 0.19 0.19 9 2.18 69.53 59 9.33 Yes 46 1.45 Yes 0 0 No -58 0.72 Yes 12 83.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 41096638 + NM_138392 SHKBP1 1 6.63 7.69 72 6.54 81.21 45 6.06 Yes 13 2.49 Yes 22 0.95 Yes -25 0.89 Yes 45 89.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 18232062 - NM_004169 SHMT1 1 0.32 0.18 12 4.06 79.09 50 7.35 Yes -2 0.79 Yes 0 0 No -49 0.57 No 23 61.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 18256402 - NM_004169 SHMT1 1 0.27 0.14 10 7.75 85.57 25 5.52 No 66 -4.15 No 0 0 No -25 0.65 No 45 52.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 18257883 - NM_004169 SHMT1 1 0.42 0.29 18 8.6 93.31 23 4.13 No 50 1.2 Yes 0 0 No -27 0.8 Yes 43 56.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 18259311 - NM_004169 SHMT1 1 1.69 0.51 26 2.75 0 30 6.32 Yes 66 -2.93 No 0 0 No -27 0.87 Yes 43 94.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 18263867 - NM_004169 SHMT1 1 11.45 3.39 68 4.19 0 48 8.34 Yes 65 1.51 Yes 42 0.29 Yes -47 0.86 Yes 28 82.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 57625263 + NR_048562 SHMT2 1 7060.23 375.07 72 6.42 76.38 23 6.88 Yes 10 1.62 Yes 22 0.95 Yes -22 0.71 Yes 48 81.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 57625966 + NR_048562 SHMT2 1 0.02 0.14 7 6.56 87.83 24 5.34 No 75 -4.2 No 19 0.78 Yes -23 0.82 Yes 47 82.24 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 57626235 + NR_048562 SHMT2 1 7704.9 640.81 72 8.54 80.14 23 5.39 No 38 0.74 No 22 0.79 Yes -22 0.88 Yes 48 90.57 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 57626265 + NR_048562 SHMT2 1 6.36 0.57 32 2.87 70.65 12 4.75 No 68 0.71 No 27 0.43 Yes -25 0.33 No 18 50.88 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 57626488 + NR_048562 SHMT2 1 0.03 0.11 8 -16.76 0 28 5.83 Yes 15 0.83 Yes 0 0 No -27 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 57627324 + NR_048562 SHMT2 1 0.02 0.14 9 -6.52 0 17 3.23 No 68 -5.58 No 25 0.95 Yes -34 0.26 No 54 19.71 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 57627381 + NR_048562 SHMT2 1 0.03 0.17 11 4.01 0 20 4.37 No 49 1.05 Yes 29 0.71 Yes -61 0.52 No 11 32 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 57627794 + NR_048562 SHMT2 1 0.08 0.31 17 -5.36 0 12 4.24 No 23 1.5 Yes 0 0 No -35 0.93 Yes 35 91.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 112726919 + NM_001324337 SHOC2 1 0.46 1.74 56 7.65 89.35 59 7.66 Yes 46 0.11 No 0 0 No -26 0.6 No 44 74.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 112743152 + NM_001324337 SHOC2 1 0.05 0.17 12 2.68 81.15 28 8.09 Yes 61 1.14 Yes 0 0 No -27 0.91 Yes 43 95.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3514861 - NM_013276 SHPK 1 0.79 0.32 19 11.1 86.79 28 4.5 No 18 0.6 No 0 0 No -27 0.58 No 45 60.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 3518869 - NM_013276 SHPK 1 0.18 0.1 7 -1.85 0 57 7.48 Yes 44 0.91 Yes 0 0 No -34 0.86 Yes 36 75.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3530572 - NM_013276 SHPK 1 0.36 0.14 9 8.92 86.17 42 5.46 No 15 0.77 No 0 0 No -27 0.88 Yes 43 91.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 3533020 - NM_013276 SHPK 1 0.32 0.13 8 12.02 89.4 33 6.24 Yes 28 -0.42 No 0 0 No -25 0.48 No 38 64.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 146214466 - NM_173082 SHPRH 1 0.33 0.18 12 7.81 79.28 40 7.23 Yes 73 0.1 No 0 0 No -28 0.61 No 42 48.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 146216109 - NM_173082 SHPRH 1 2.69 0.69 36 -0.45 0 33 6.56 Yes 20 1.2 Yes 0 0 No -33 0.61 No 38 66.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 146239771 - NM_173082 SHPRH 1 0.69 0.31 16 8.36 88.62 34 6.32 Yes 21 0.45 No 0 0 No -33 0.91 Yes 37 84.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 146262160 - NM_173082 SHPRH 1 3.54 1.56 51 8.87 81.26 53 5.42 No 7 0.37 No 0 0 No -35 0.4 No 35 56.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 146264935 - NM_173082 SHPRH 1 0.96 0.29 19 -1.15 0 25 6.38 Yes 8 0.07 No 0 0 No -24 0.85 Yes 46 76.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 146266793 - NM_173082 SHPRH 1 1.26 0.49 30 5.57 71.36 47 6.99 Yes 34 1.42 Yes 25 0.8 Yes -46 0.69 Yes 24 82.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 146273060 - NM_173082 SHPRH 1 2.54 1.01 45 1.99 75.72 24 5.86 Yes 11 0.82 Yes 23 0.78 Yes -23 0.61 No 47 81.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 72802799 - NM_018130 SHQ1 1 0.27 0.22 11 5.84 74.64 60 5.66 Yes 32 1.78 Yes 0 0 No -44 0.83 Yes 26 94.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 72827595 - NM_018130 SHQ1 1 0.19 0.13 7 7.52 83.92 46 9.06 Yes 33 2.22 Yes 0 0 No -45 0.76 Yes 25 86.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 72830562 - NM_018130 SHQ1 1 0.33 0.24 13 7.38 86.84 29 6.02 Yes 16 1 Yes 0 0 No -28 0.88 Yes 42 76.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 72832291 - NM_018130 SHQ1 1 0.46 0.31 17 10.51 82.84 28 5.57 Yes 40 -2.58 No 0 0 No -25 0.72 Yes 45 60.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 72834610 - NM_018130 SHQ1 1 1.29 0.85 35 5.9 84.22 20 5.76 Yes 7 1.4 Yes 0 0 No -24 0.65 No 46 78.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 72842655 - NM_018130 SHQ1 1 0.34 0.21 13 6.14 84.41 27 6.5 Yes 14 1.19 Yes 0 0 No -26 0.54 No 44 67.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 72848302 - NM_018130 SHQ1 1 0.2 0.15 11 8.62 88.27 59 8.53 Yes 46 1.83 Yes 0 0 No -36 0.62 No 34 66.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 72859104 - NM_018130 SHQ1 1 1.47 0.83 36 8 87.73 31 6.32 Yes 37 1.14 Yes 30 0.68 Yes -30 0.85 Yes 40 90.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 72861905 - NM_018130 SHQ1 1 0.34 0.24 12 0.66 74.93 32 7.05 Yes 72 1.1 Yes 0 0 No -31 0.61 No 39 88.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 72863707 - NM_018130 SHQ1 1 0.93 0.64 31 3.05 69.31 24 6.52 Yes 11 1.49 Yes 27 0.83 Yes -23 0.68 Yes 43 84.16 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 72873701 - NM_018130 SHQ1 1 0.21 0.15 7 -0.72 80.89 27 5.62 Yes 14 0.38 No 0 0 No -27 0.68 Yes 43 76.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 72893605 - NM_018130 SHQ1 1 0.2 0.17 9 5.62 75.77 31 6.53 Yes 52 0.51 No 30 0.73 Yes -30 0.88 Yes 40 84.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 124517332 - NM_170601 SIAE 1 2.53 0.42 24 3.65 68.91 43 8.16 Yes 53 -3.91 No 0 0 No -30 0.39 No 28 50.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 124524390 - NM_170601 SIAE 1 28.15 3.49 67 7.45 80.09 58 9.38 Yes 45 1.96 Yes 0 0 No -57 0.55 No 37 64.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 150463648 - NM_005067 SIAH2 1 1.13 1.29 46 11.22 82.07 21 5.66 Yes 8 1.28 Yes 0 0 No -20 0.52 No 45 62.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 150477478 - NM_005067 SIAH2 1 0.2 0.17 11 12.39 95.65 27 5.48 No 21 0.18 No 0 0 No -23 0.78 Yes 47 90.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 113302194 + NR_136280 SIDT1 1 0.81 0.33 20 11.89 83.33 49 7.4 Yes 36 1.45 Yes 0 0 No -42 0.53 No 22 64.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 113302236 + NR_136280 SIDT1 1 0.33 0.17 11 5.02 69.99 51 6.69 Yes 3 1.22 Yes 24 0.7 Yes -26 0.36 No 30 49.92 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 113302194 + NR_136280 SIDT1 1 0.64 0.36 19 11.89 83.33 49 7.4 Yes 36 1.45 Yes 0 0 No -42 0.53 No 22 64.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 113302236 + NR_136280 SIDT1 1 0.44 0.19 12 5.02 69.99 51 6.69 Yes 3 1.22 Yes 24 0.7 Yes -26 0.36 No 30 49.92 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 113303549 + NR_136280 SIDT1 1 0.1 0.14 9 -1.14 0 47 8.64 Yes 34 1.09 Yes 0 0 No -46 0.68 Yes 24 71.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 113304860 + NR_136280 SIDT1 1 0.4 0.29 18 -0.05 63.5 35 5.97 Yes 22 0.54 No 0 0 No -40 0.67 Yes 30 88.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 113309772 + NR_136280 SIDT1 1 0.11 0.1 7 6.74 84.96 26 5.35 No -4 0.68 No 0 0 No -26 0.46 No 44 59.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 113321233 + NR_136280 SIDT1 1 0.43 0.47 27 -0.74 0 23 4.8 No 24 0.58 No 22 0.74 Yes -22 0.85 Yes 48 89.72 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 113321788 + NR_136280 SIDT1 1 0.08 0.1 7 8.45 91.05 24 5.48 No 41 -2.56 No 0 0 No -23 0.69 Yes 54 56.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 113322406 + NR_136280 SIDT1 1 0.18 0.18 10 7.92 82.39 43 7.08 Yes 30 1.02 Yes 0 0 No -24 0.56 No 46 73.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 113325887 + NR_136280 SIDT1 1 1601.16 91.69 72 11.51 96.03 17 6.74 Yes 4 1.53 Yes 31 0.3 Yes -29 0.63 No 41 69.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 113348241 + NR_136280 SIDT1 1 0.37 0.22 16 3.67 82.5 29 7.56 Yes 29 0.05 No 0 0 No -28 0.6 No 42 77.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 117053176 + NM_001040455 SIDT2 1 0.53 0.4 24 4.39 82.69 23 5.2 No 75 0.41 No 0 0 No -22 0.96 Yes 48 96.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 117053403 + NM_001040455 SIDT2 1 0.45 0.32 18 -15.13 0 19 4.47 No 52 0.67 No 29 0.65 Yes -18 0.58 No 62 22.96 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 117057705 + NM_001040455 SIDT2 1 0.67 0.46 26 6.06 76.73 75 10.48 Yes 62 2.6 Yes 24 0.18 Yes -53 0.43 No 51 46.63 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 117058607 + NM_001040455 SIDT2 1 0.12 0.11 8 10.6 85.08 21 6.24 Yes 56 2.77 Yes 20 0.75 Yes -20 0.72 Yes 50 76.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 117059444 + NM_001040455 SIDT2 1 4.91 3.54 66 8.89 82.12 24 5.47 No 76 -0.8 No 23 0.59 Yes -47 0.69 Yes 23 49.26 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 117060857 + NM_001040455 SIDT2 1 3.44 2.36 63 -3.59 0 13 4.36 No 62 -4.63 No 30 0.43 Yes -12 0.26 No 58 56.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 51916514 - NM_001171161 SIGLEC10 1 1.15 0.21 10 7.02 77.69 27 6.46 Yes 14 1.23 Yes 0 0 No -27 0.78 Yes 43 88.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 34635638 - NM_001282207 SIGMAR1 1 5.31 4.26 67 6.18 84.54 22 5.73 Yes 60 2.03 Yes 0 0 No -21 0.9 Yes 49 91.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 111477418 + NM_015191 SIK2 1 0.96 0.31 18 9.07 87.48 30 4.89 No 13 0.78 Yes 0 0 No -25 0.68 Yes 45 82.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 111524110 + NM_015191 SIK2 1 0.69 0.35 18 5.04 76.5 32 5.97 Yes 60 0.35 No 0 0 No -23 0.62 No 39 60.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 111524319 + NM_015191 SIK2 1 1.35 0.71 35 7.48 93.37 24 4.3 No 11 0.6 No 0 0 No -23 0.87 Yes 47 92.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 111531863 + NM_015191 SIK2 1 0.49 0.19 10 6.54 84.41 32 6.16 Yes 19 0.68 No 0 0 No -31 0.7 Yes 39 80.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 111542351 + NM_015191 SIK2 1 0.26 0.14 9 7.14 86.54 21 5.48 No 5 0.81 Yes 0 0 No -20 0.67 Yes 50 75.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 111545047 + NM_015191 SIK2 1 0.43 0.22 12 5.83 81.38 59 8.72 Yes 46 2.46 Yes 0 0 No -58 0.85 Yes 12 93.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 111571637 + NM_015191 SIK2 1 0.5 0.17 9 2 72.95 33 6.08 Yes 38 1 Yes 0 0 No -32 0.9 Yes 38 95.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 111592557 + NM_015191 SIK2 1 0.57 0.21 14 -4.33 0 59 5.7 Yes 46 0.72 No 0 0 No -33 0.8 Yes 37 48.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 116717174 - NM_001281748 SIK3 1 0.53 0.38 23 6.78 80.13 35 6.7 Yes 22 0.38 No 34 0.63 Yes -35 0.65 No 36 58.83 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 116729416 - NM_001281748 SIK3 1 252.6 40.1 72 10.13 91.84 36 7.21 Yes 61 -1.39 No 35 0.41 Yes -33 0.83 Yes 37 94.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 116764684 - NM_001281748 SIK3 1 1.64 1.08 49 6.78 75.37 46 6.2 Yes 33 1.58 Yes 26 0.75 Yes -45 0.46 No 25 89.08 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 116775720 - NM_001281748 SIK3 1 0.47 0.36 22 8.46 84.44 56 6.44 Yes 29 1.33 Yes 19 0.58 Yes -41 0.82 Yes 29 85.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 116791889 - NM_001281748 SIK3 1 0.31 0.24 14 3.4 76.16 32 5.69 Yes 2 0.83 Yes 0 0 No -31 0.66 No 39 86.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 116793336 - NM_001281748 SIK3 1 1.38 1.01 44 8.75 87.01 34 7.17 Yes 52 0.86 Yes 0 0 No -29 0.83 Yes 41 93.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 116795569 - NM_001281748 SIK3 1 0.24 0.18 11 3.94 80.39 25 4.75 No 33 -3.2 No 0 0 No -24 0.9 Yes 46 95.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 116795958 - NM_001281748 SIK3 1 0.26 0.19 11 4.13 0 57 7.25 Yes 44 0.61 No 0 0 No -37 0.43 No 41 63.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 115317407 - NR_049742 SIKE1 1 0.12 0.22 10 11 81.78 33 6.25 Yes 20 1.04 Yes 0 0 No -32 0.63 No 30 60.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 115321672 - NR_049742 SIKE1 1 1.14 1.32 46 3.05 0 36 6.48 Yes 76 -2.67 No 0 0 No -33 0.74 Yes 37 74.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 115321676 - NR_049742 SIKE1 1 1.22 1.49 53 -0.45 80.13 32 6.16 Yes 72 -2.67 No 31 0.67 Yes -29 0.76 Yes 41 73.83 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 115322837 - NR_049742 SIKE1 1 963.31 77.94 72 5.49 86.54 22 5.29 No 59 2.05 Yes 21 0.88 Yes -21 0.9 Yes 49 95 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 138355143 - NM_001037633 SIL1 1 0.11 0.13 8 0.66 0 17 5.58 Yes 67 -3.05 No 0 0 No -30 0.48 No 50 60.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 138443430 - NM_001037633 SIL1 1 0.83 1.36 46 2.95 63.59 40 6.32 Yes 27 0.5 No 0 0 No -33 0.72 Yes 37 76.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 138443901 - NM_001037633 SIL1 1 0.42 0.67 30 7.65 84.52 37 5.86 Yes 68 1.39 Yes 28 0.25 Yes -28 0.59 No 42 57.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 138456860 - NM_001037633 SIL1 1 2.73 4.06 70 4.99 85.21 28 6.48 Yes 15 0.8 Yes 24 0.83 Yes -27 0.95 Yes 43 92.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 138459502 - NM_001037633 SIL1 1 0.29 0.39 21 5.02 80.59 30 4.96 No 71 0.5 No 0 0 No -29 0.62 No 41 80.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 75668357 - NM_015477 SIN3A 1 0.17 0.21 14 5.59 92.07 16 5.2 No 41 0.27 No 0 0 No -20 0.59 No 50 90.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 75674032 - NM_015477 SIN3A 1 0.73 0.69 30 5.42 88.19 24 4.84 No 0 0.32 No 0 0 No -23 0.93 Yes 47 95.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 75674062 - NM_015477 SIN3A 1 0.3 0.31 20 6.31 82.54 29 5.57 Yes 65 1.11 Yes 23 0.83 Yes -26 0.81 Yes 44 84.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 75676773 - NM_015477 SIN3A 1 0.11 0.13 7 2.26 0 9 3.87 No 19 1.1 Yes 0 0 No -31 0.78 Yes 39 81.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 75685849 - NM_015477 SIN3A 1 0.16 0.25 18 2.08 85.29 34 6.32 Yes 51 0.66 No 0 0 No -25 0.57 No 45 68.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 75699483 - NM_015477 SIN3A 1 0.34 0.32 20 -0.01 79.52 29 6.92 Yes 16 1.08 Yes 0 0 No -28 0.96 Yes 42 96.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 75715616 - NM_015477 SIN3A 1 0.94 0.89 41 11.75 87.15 62 8.05 Yes 49 1.09 Yes 0 0 No -44 0.4 No 26 47.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 75717282 - NM_015477 SIN3A 1 0.22 0.18 11 8.63 91.45 15 5.08 No 2 0.46 No 0 0 No -29 0.91 Yes 41 86.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 16942582 + NM_001297595 SIN3B 1 0.45 0.4 18 7.58 86.73 21 4.08 No 75 0.88 Yes 0 0 No -20 0.87 Yes 50 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16944917 + NM_001297595 SIN3B 1 0.19 0.17 9 2.53 64.57 33 6 Yes 27 0.89 Yes 0 0 No -32 0.83 Yes 38 77.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16952581 + NM_001297595 SIN3B 1 0.75 0.64 37 -9.96 67.7 24 5.73 Yes 11 1.68 Yes 0 0 No -24 0.58 No 47 57.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 16959988 + NM_001297595 SIN3B 1 0.15 0.11 7 5.04 73.96 40 6.6 Yes 27 0.5 No 0 0 No -27 0.74 Yes 43 64.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 16965925 + NM_001297595 SIN3B 1 2.19 0.9 40 7.89 87.22 29 7.08 Yes 16 1.4 Yes 0 0 No -22 0.58 No 48 68.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 16965972 + NM_001297595 SIN3B 1 0.4 0.15 9 9 86.97 32 7.48 Yes 63 1.39 Yes 0 0 No -31 0.9 Yes 39 94.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16973694 + NM_001297595 SIN3B 1 14.61 5.24 70 6.88 78.53 23 4.9 No 10 1.99 Yes 22 0.97 Yes -22 0.91 Yes 48 83.18 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 16973979 + NM_001297595 SIN3B 1 0.91 0.33 20 9 85.15 28 5.61 Yes -1 1.2 Yes 0 0 No -27 0.9 Yes 43 75.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16976224 + NM_001297595 SIN3B 1 1.05 0.33 18 0.94 0 31 6.71 Yes 18 2.39 Yes 0 0 No -30 0.84 Yes 40 92.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16982006 + NM_001297595 SIN3B 1 0.55 0.13 9 7.35 93.27 17 6.15 Yes 4 1.17 Yes 22 0.69 Yes -33 0.37 No 54 64.32 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 16983278 + NM_001297595 SIN3B 1 0.52 0.15 10 3.01 0 41 9 Yes 28 2.02 Yes 40 0.7 Yes -40 0.82 Yes 30 86.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 65410407 + NM_153253 SIPA1 1 0.34 0.28 17 1 83.28 51 3.54 No 38 1.03 Yes 0 0 No -28 0.83 Yes 42 84.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 65413336 + NM_153253 SIPA1 1 0.09 0.11 7 -0.03 0 17 4.58 No 15 1.86 Yes 0 0 No -60 0.73 Yes 10 55.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 65413742 + NM_153253 SIPA1 1 0.35 0.53 28 7.96 86.13 16 6.9 Yes 68 0.35 No 0 0 No -27 0.62 No 49 42.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 65418042 + NM_153253 SIPA1 1 0.22 0.25 14 -13.25 59.74 28 7.14 Yes 15 2.09 Yes 0 0 No -27 0.91 Yes 43 88.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71997047 + NM_001284245 SIPA1L1 1 0.39 0.47 26 7.29 85.6 18 5.36 No 70 1.18 Yes 0 0 No -23 0.41 No 47 50.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 72040205 + NM_001284245 SIPA1L1 1 13.67 15.54 72 -0.39 70.22 38 6.27 Yes 71 0.92 Yes 20 0.5 Yes -37 0.95 Yes 33 98.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 72043251 + NM_001284245 SIPA1L1 1 12.95 15.13 72 6.78 81.43 22 7.43 Yes 9 0.88 Yes 21 0.75 Yes -21 0.87 Yes 49 87.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 72071044 + NM_001284245 SIPA1L1 1 0.77 1.15 38 8 80.44 25 5.99 Yes 12 0.95 Yes 0 0 No -24 0.73 Yes 46 90.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 72085921 + NM_001284245 SIPA1L1 1 0.35 0.67 34 7.52 79.44 35 6.31 Yes 70 -3.93 No 0 0 No -26 0.58 No 44 73.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 72093716 + NM_001284245 SIPA1L1 1 0.18 0.17 10 6.45 78.48 26 6.44 Yes 13 0.78 Yes 0 0 No -25 0.91 Yes 45 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 72116865 + NM_001284245 SIPA1L1 1 0.15 0.17 7 8.19 82.64 43 4.96 No 13 0.35 No 0 0 No -25 0.89 Yes 45 85.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 72118071 + NM_001284245 SIPA1L1 1 0.33 0.4 23 9.93 92.58 23 5.74 Yes 68 1.72 Yes 0 0 No -23 0.54 No 48 59.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 72149130 + NM_001284245 SIPA1L1 1 0.13 0.13 7 9.77 91.36 20 6.82 Yes 7 1.05 Yes 0 0 No -22 0.82 Yes 48 82.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 72151137 + NM_001284245 SIPA1L1 1 0.23 0.24 13 8.12 77.58 24 8.69 Yes 11 1.94 Yes 0 0 No -23 0.9 Yes 47 87.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 72153281 + NM_001284245 SIPA1L1 1 0.4 0.42 21 10.53 86.87 40 6.77 Yes 27 0.69 No 0 0 No -36 0.67 Yes 34 73.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 72171437 + NM_001284245 SIPA1L1 1 2.48 2.33 60 8.11 81.92 36 6.16 Yes 23 0.49 No 31 0.18 Yes -31 0.6 No 39 62.58 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 72190504 + NM_001284245 SIPA1L1 1 1.25 1.25 52 9.19 81.93 52 7.48 Yes 39 1.51 Yes 0 0 No -51 0.66 No 31 67.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 72204960 + NM_001284245 SIPA1L1 1 0.62 0.44 22 5.89 85.23 31 7 Yes 75 -3.18 No 28 0.6 Yes -31 0.62 No 40 80.44 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 72204960 + NM_001284245 SIPA1L1 1 59.83 38.56 72 5.89 85.23 31 7 Yes 75 -3.18 No 28 0.6 Yes -31 0.62 No 40 80.44 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 38398183 + NM_015073 SIPA1L3 1 2.86 1.25 43 5.25 86.21 11 6.16 Yes -2 0.06 No 29 0.45 Yes -29 0.59 No 41 56.51 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 38409834 + NM_015073 SIPA1L3 1 2.03 0.9 37 9.27 85.71 25 6.07 Yes 12 0.55 No 0 0 No -23 0.42 No 40 53.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 38420334 + NM_015073 SIPA1L3 1 1.26 0.53 23 6.98 78.7 37 8.37 Yes 43 2.44 Yes 0 0 No -36 0.35 No 15 74.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 38498735 + NM_015073 SIPA1L3 1 2.41 1.06 42 10.38 87.37 22 5.29 No 9 1.03 Yes 0 0 No -21 0.72 Yes 49 63.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 38545447 + NM_015073 SIPA1L3 1 0.87 0.58 29 9.36 88.88 30 5.91 Yes 48 1.43 Yes 0 0 No -29 0.56 No 46 48.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 38551888 + NM_015073 SIPA1L3 1 0.89 0.61 34 9.96 88.27 20 7.28 Yes 46 1.62 Yes 0 0 No -19 0.58 No 51 89.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 38555472 + NM_015073 SIPA1L3 1 0.47 0.26 15 10.69 88.62 35 4.45 No 38 1.69 Yes 0 0 No -27 0.77 Yes 43 77.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38592232 + NM_015073 SIPA1L3 1 0.56 0.6 26 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -25 0.46 No 45 64.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 38598153 + NM_015073 SIPA1L3 1 0.15 0.19 12 7.02 82.62 32 6.71 Yes 19 1.76 Yes 0 0 No -31 0.86 Yes 39 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38600325 + NM_015073 SIPA1L3 1 0.11 0.15 10 3.53 84.34 24 4.71 No 7 0.17 No 0 0 No -23 0.95 Yes 47 92.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 38600917 + NM_015073 SIPA1L3 1 0.27 0.32 20 6.56 87.32 24 5.49 No 74 1.3 Yes 0 0 No -23 0.78 Yes 47 67.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 38603419 + NM_015073 SIPA1L3 1 0.87 1.28 54 12.8 92.68 39 6.59 Yes 26 1.47 Yes 0 0 No -38 0.86 Yes 32 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38619266 + NM_015073 SIPA1L3 1 0.13 0.17 10 4.77 68.17 35 6.68 Yes 66 0.96 Yes 0 0 No -34 0.86 Yes 36 92.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38622293 + NM_015073 SIPA1L3 1 0.45 0.63 27 10.78 87.44 57 7.69 Yes 44 1.98 Yes 31 0.03 Yes -52 0.63 No 18 84.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 38684179 + NM_015073 SIPA1L3 1 7.98 7.19 71 -1.11 67.24 36 7.04 Yes 23 1.01 Yes 23 0.71 Yes -35 0.8 Yes 35 78.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 38696689 + NM_015073 SIPA1L3 1 0.3 0.26 14 2.67 82.22 23 4.98 No 10 -1.16 No 0 0 No -22 0.91 Yes 48 88.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 1908777 + NM_001040023 SIRPA 1 1.18 0.21 13 7.7 85.05 23 6.08 Yes 10 1.51 Yes 0 0 No -22 0.84 Yes 48 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 69654512 + NM_012238 SIRT1 1 0.43 0.26 16 4.64 87.81 26 5.1 No 53 1.49 Yes 0 0 No -25 0.41 No 24 42.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 69657732 + NM_012238 SIRT1 1 0.67 0.4 22 7.01 82.63 29 7.05 Yes 16 1.52 Yes 0 0 No -28 0.55 No 42 70.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 69657735 + NM_012238 SIRT1 1 0.48 0.28 18 7.55 90.79 32 7.26 Yes 19 1.51 Yes 0 0 No -31 0.55 No 39 68.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 69661331 + NM_012238 SIRT1 1 0.24 0.14 10 9.51 93.18 25 6.56 Yes 12 0.23 No 0 0 No -24 0.72 Yes 46 83.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 69665919 + NM_012238 SIRT1 1 4.03 2.49 61 4.19 83.68 57 7.87 Yes 30 1.52 Yes 42 0.46 Yes -23 0.69 Yes 47 58.21 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 69665922 + NM_012238 SIRT1 1 0.39 0.24 16 -1.28 72.63 60 8.03 Yes 33 1.51 Yes 0 0 No -26 0.69 Yes 36 59.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 69669016 + NM_012238 SIRT1 1 0.17 0.11 8 -4.64 0 58 9.27 Yes 45 1.59 Yes 0 0 No -57 0.3 No 13 87.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 39370814 - NR_034146 SIRT2 1 2.9 1.03 39 7.73 89.03 50 5.53 No 6 0.73 No 24 0.67 Yes -18 0.67 Yes 38 61.86 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 39371490 - NR_034146 SIRT2 1 1.67 1.01 51 9.13 90.42 40 6.69 Yes 52 1.52 Yes 0 0 No -18 0.69 Yes 52 73.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39372374 - NR_034146 SIRT2 1 0.32 0.11 8 4.5 77.77 21 5.23 No 67 -4.96 No 0 0 No -20 0.5 No 47 52.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39379964 - NR_034146 SIRT2 1 0.23 0.19 13 10.53 83.73 36 7.66 Yes 23 0.51 No 27 0.74 Yes -24 0.58 No 46 75.97 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 39380596 - NR_034146 SIRT2 1 1.31 0.88 41 4.2 0 9 3.87 No 9 2.48 Yes 0 0 No -25 0.41 No 49 54.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39384172 - NR_034146 SIRT2 1 0.44 0.22 8 1.15 0 36 7.94 Yes 23 1.43 Yes 39 0.73 Yes -22 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 226082 - NM_001017524 SIRT3 1 0.75 0.17 9 10.93 84.16 32 6.16 Yes 42 1.29 Yes 31 0.79 Yes -31 0.91 Yes 39 96.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 230642 - NM_001017524 SIRT3 1 1.2 0.28 17 8.66 90.42 28 5 No 76 -4.46 No 22 0.64 Yes -22 0.66 No 48 54.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 230707 - NM_001017524 SIRT3 1 1.65 0.4 24 3.33 66.53 24 7.01 Yes 71 0.71 No 23 0.85 Yes -23 0.5 No 47 46.2 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 13585218 + NM_012241 SIRT5 1 1.43 0.5 26 4.29 83.06 13 6.56 Yes 0 0.86 Yes 38 0.11 Yes -29 0.35 No 32 49.96 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 13594661 + NM_012241 SIRT5 1 0.65 0.21 12 12.08 86.17 44 7.07 Yes 31 0.86 Yes 0 0 No -43 0.72 Yes 32 84.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 13597959 + NM_012241 SIRT5 1 2.28 0.49 28 6.05 85.61 31 4.97 No 66 0.73 No 0 0 No -29 0.59 No 43 76.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 13597962 + NM_012241 SIRT5 1 0.53 0.1 7 7.49 91.84 34 5.12 No 69 0.72 No 0 0 No -30 0.55 No 40 73.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 13601312 + NM_012241 SIRT5 1 1.14 0.31 17 8.53 86.14 9 6.08 Yes 48 1.51 Yes 0 0 No -32 0.44 No 40 54.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 13604707 + NM_012241 SIRT5 1 2.52 0.78 35 7.46 90.33 18 6.24 Yes 5 1.43 Yes 18 0.24 Yes -17 0.57 No 53 62.67 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 4175931 - NM_001321064 SIRT6 1 0.15 0.11 7 -2.44 0 41 7.21 Yes 28 1.5 Yes 0 0 No -40 0.9 Yes 30 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79870484 - NM_016538 SIRT7 1 0.17 0.1 7 -2.55 0 16 3.82 No 18 1.77 Yes 0 0 No -30 0.92 Yes 40 91.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79871170 - NM_016538 SIRT7 1 0.82 0.44 23 10.4 85.27 36 5.32 No 23 0.2 No 27 0.87 Yes -27 0.9 Yes 43 94.58 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 79871754 - NM_016538 SIRT7 1 0.31 0.24 12 -2.39 0 26 7.29 Yes 13 1.74 Yes 0 0 No -25 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 79872333 - NM_016538 SIRT7 1 1.8 0.86 42 5.57 81.75 24 5.1 No 11 0.59 No 0 0 No -23 0.95 Yes 47 87.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79872381 - NM_016538 SIRT7 1 3.15 1.53 54 11.54 85.82 29 5.92 Yes 35 1.55 Yes 28 0.43 Yes -47 0.66 No 42 43.67 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 79874016 - NM_016538 SIRT7 1 0.69 0.35 20 7.18 79.37 26 5.29 No 65 0.62 No 25 0.92 Yes -25 0.79 Yes 40 76.9 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 79874091 - NM_016538 SIRT7 1 0.27 0.13 9 5.54 75.25 38 7.35 Yes 25 0.52 No 0 0 No -37 0.6 No 33 68.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 35650093 - NM_014450 SIT1 1 0.99 0.47 26 1.69 75.88 13 4.79 No 69 -5.27 No 18 0.95 Yes -23 0.49 No 54 41.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 35650590 - NM_014450 SIT1 1 0.49 0.36 16 4.03 74.57 32 5.83 Yes 60 0.54 No 0 0 No -31 0.69 Yes 39 85.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 105225555 + NM_006427 SIVA1 1 0.63 1.82 55 7.6 78.23 39 8.25 Yes 26 0.87 Yes 0 0 No -38 0.94 Yes 32 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 105225770 + NM_006427 SIVA1 1 0.57 1.57 52 -1.08 0 16 3.87 No 32 1.77 Yes 0 0 No -44 0.79 Yes 26 88.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 57196778 - NM_182620 SKA2 1 0.23 0.29 13 3.51 71.71 44 6.5 Yes 55 -2.71 No 0 0 No -27 0.48 No 43 53.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 57208723 - NM_182620 SKA2 1 0.07 0.11 8 2.26 0 15 3.87 No 2 1.57 Yes 0 0 No -24 0.56 No 35 53.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 57231529 - NM_182620 SKA2 1 0.09 0.15 9 11.24 98.73 43 6.8 Yes 36 1.5 Yes 0 0 No -48 0.68 Yes 22 79.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21729951 - NM_001166017 SKA3 1 883.1 95.11 72 10.85 86.44 28 5.56 Yes 68 0.52 No 27 0.45 Yes -25 0.27 No 45 33.86 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 21730323 - NM_001166017 SKA3 1 1.62 0.19 12 11.57 88.27 29 5.92 Yes 41 1.46 Yes 0 0 No -25 0.77 Yes 45 84.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21735958 - NM_001166017 SKA3 1 0.18 0.18 12 5.77 84.38 23 5.95 Yes 7 1.07 Yes 0 0 No -26 0.89 Yes 44 89.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21737431 - NM_001166017 SKA3 1 0.09 0.1 7 7.27 86.97 23 5 No 74 -4.85 No 0 0 No -20 0.77 Yes 50 73.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 21739560 - NM_001166017 SKA3 1 0.32 0.32 22 7.41 87.15 58 6.76 Yes 71 0.18 No 0 0 No -24 0.74 Yes 46 80.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 21741735 - NM_001166017 SKA3 1 0.13 0.14 10 1.22 0 24 6.93 Yes 11 1.24 Yes 0 0 No -23 0.9 Yes 47 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21746616 - NM_001166017 SKA3 1 0.14 0.11 7 1.8 77.66 19 4.49 No 6 0.84 Yes 0 0 No -35 0.38 No 35 64.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 46213923 - NM_003726 SKAP1 1 3.33 2.94 62 5.91 72.5 48 5.82 Yes 58 -0.67 No 43 0.18 Yes -43 0.48 No 23 64.41 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 46239929 - NM_003726 SKAP1 1 53.65 35.21 72 4.19 77.93 31 6.5 Yes 18 1.21 Yes 27 0.81 Yes -30 0.83 Yes 40 85.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 46239929 - NM_003726 SKAP1 1 3.48 2.29 61 4.19 77.93 31 6.5 Yes 18 1.21 Yes 27 0.81 Yes -30 0.83 Yes 40 85.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 46247680 - NM_003726 SKAP1 1 0.21 0.14 9 3.56 83.79 31 6.29 Yes 53 -2.07 No 0 0 No -30 0.87 Yes 40 93.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 46256535 - NM_003726 SKAP1 1 0.19 0.13 7 3.64 68.23 18 3.73 No 37 0.08 No 0 0 No -23 0.78 Yes 47 81.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 46256807 - NM_003726 SKAP1 1 0.27 0.21 13 8.62 82.33 24 6.25 Yes 49 1.87 Yes 0 0 No -23 0.89 Yes 47 79.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46262274 - NM_003726 SKAP1 1 0.15 0.13 7 4.75 81.9 35 6.24 Yes 58 1.63 Yes 0 0 No -34 0.66 No 36 81.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 46423282 - NM_003726 SKAP1 1 0.81 1.04 37 4.87 84.7 26 7.12 Yes 13 0.91 Yes 0 0 No -25 0.96 Yes 45 97.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46454769 - NM_003726 SKAP1 1 0.23 0.31 18 9.34 86.87 24 6.93 Yes 11 1.46 Yes 23 0.89 Yes -23 0.8 Yes 47 92.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 46460736 - NM_003726 SKAP1 1 0.17 0.22 13 7.69 88.87 26 6.55 Yes 13 1.52 Yes 0 0 No -25 0.9 Yes 45 92.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46480558 - NM_003726 SKAP1 1 0.31 0.28 17 10.07 88.27 31 5.77 Yes 14 0.18 No 0 0 No -30 0.5 No 40 60.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 46487023 - NM_003726 SKAP1 1 0.99 0.94 38 4.62 0 32 6.21 Yes 48 1.4 Yes 0 0 No -31 0.95 Yes 39 95.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46487027 - NM_003726 SKAP1 1 0.18 0.17 12 2.3 84.41 28 5.91 Yes 44 1.41 Yes 0 0 No -27 0.95 Yes 43 95.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46506831 - NM_003726 SKAP1 1 0.13 0.13 9 7.41 81.87 32 5.63 Yes 39 0.68 No 0 0 No -25 0.91 Yes 45 84.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 26708719 - NM_001303468 SKAP2 1 0.77 0.89 39 -1.21 0 51 7.86 Yes 38 0.9 Yes 0 0 No -26 0.76 Yes 44 44.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 26708724 - NM_001303468 SKAP2 1 0.76 0.88 42 2.07 71.97 46 7.54 Yes 33 0.9 Yes 0 0 No -21 0.43 No 30 54.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 26709335 - NM_001303468 SKAP2 1 0.45 0.51 26 4.71 92.56 23 5.17 No 2 0.62 No 0 0 No -22 0.86 Yes 48 85.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 26709338 - NM_001303468 SKAP2 1 0.13 0.17 10 2.05 75.45 20 4.87 No -1 0.65 No 0 0 No -19 0.78 Yes 51 83.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 26722449 - NM_001303468 SKAP2 1 0.07 0.14 9 7.77 81.64 27 4.65 No 52 -3.17 No 0 0 No -26 0.6 No 44 60.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 26729979 - NM_001303468 SKAP2 1 0.38 0.6 33 -3.27 75.97 21 6.5 Yes 5 0.84 Yes 0 0 No -32 0.56 No 38 60.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 26763046 - NM_001303468 SKAP2 1 0.06 0.1 7 4.99 74.56 42 5.88 Yes 76 0.3 No 0 0 No -36 0.64 No 29 65.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 26776516 - NM_001303468 SKAP2 1 0.12 0.17 10 11.53 88.27 29 6.23 Yes 16 0.58 No 0 0 No -26 0.77 Yes 44 86.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 26780580 - NM_001303468 SKAP2 1 0.05 0.1 7 10.21 98.19 55 8.05 Yes 42 1.25 Yes 0 0 No -46 0.58 No 16 55.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 26786306 - NM_001303468 SKAP2 1 0.09 0.18 11 6.93 95.63 21 4.92 No 4 0.87 Yes 20 0.28 Yes -20 0.79 Yes 50 80.75 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 26887688 - NM_001303468 SKAP2 1 0.2 0.4 22 6.17 76.2 15 4.14 No 68 -5.26 No 30 0.33 Yes -23 0.4 No 47 54.02 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 2235780 + NM_003036 SKI 1 0.45 0.14 9 6.09 86.49 48 7.61 Yes 67 2.28 Yes 0 0 No -47 0.84 Yes 23 92.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 170081758 + NM_001248008 SKIL 1 1.88 1.53 49 8.7 88.27 29 5.66 Yes 35 0.66 No 0 0 No -28 0.91 Yes 42 97.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 170099035 + NM_001248008 SKIL 1 0.14 0.14 8 2.91 0 33 7.01 Yes 20 0.89 Yes 24 0.66 Yes -36 0.85 Yes 34 84.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 170100089 + NM_001248008 SKIL 1 0.21 0.15 11 9.32 80.74 33 9.25 Yes 20 0.95 Yes 0 0 No -23 0.59 No 38 64.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 170103066 + NM_001248008 SKIL 1 0.2 0.21 11 10.07 88.27 36 7.97 Yes 23 0.43 No 0 0 No -35 0.58 No 35 68.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 170108910 + NM_001248008 SKIL 1 0.27 0.31 15 4.28 86.12 12 4.9 No 69 -5.35 No 0 0 No -25 0.92 Yes 45 96.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 170110027 + NM_001248008 SKIL 1 0.67 0.71 30 -0.78 60.84 32 6.68 Yes 26 -3.3 No 23 0.92 Yes -31 0.31 No 39 21.62 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 54620295 + NM_015360 SKIV2L2 1 0.07 0.22 11 10.15 89.4 46 9.61 Yes 33 1.98 Yes 29 0.03 Yes -51 0.67 Yes 25 77.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 54624503 + NM_015360 SKIV2L2 1 0.04 0.14 9 4.39 88.48 20 4.79 No 12 0.84 Yes 29 0.72 Yes -20 0.64 No 50 67.23 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 54625183 + NM_015360 SKIV2L2 1 0.31 0.92 33 10.61 87.64 25 7.4 Yes 12 1.55 Yes 24 0.95 Yes -24 0.9 Yes 46 94.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 54632476 + NM_015360 SKIV2L2 1 0.07 0.21 11 8.38 90.96 14 5.2 No 1 0.71 No 0 0 No -25 0.64 No 48 72.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 54640371 + NM_015360 SKIV2L2 1 0.04 0.15 10 7.46 86.18 27 5.53 No 27 0.71 No 26 0.68 Yes -26 0.57 No 46 64.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 54640371 + NM_015360 SKIV2L2 1 1.1 3.71 69 7.46 86.18 27 5.53 No 27 0.71 No 26 0.68 Yes -26 0.57 No 46 64.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 54670719 + NM_015360 SKIV2L2 1 0.24 0.58 27 7.84 79.63 29 5.57 Yes 37 -2.08 No 0 0 No -28 0.96 Yes 42 98.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 54674126 + NM_015360 SKIV2L2 1 0.04 0.11 7 -0.61 0 20 5.6 Yes 7 1.33 Yes 26 0.69 Yes -19 0.63 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 54674300 + NM_015360 SKIV2L2 1 0.06 0.14 10 9.68 89.83 37 7.23 Yes 5 1.36 Yes 0 0 No -36 0.72 Yes 34 75.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 54696064 + NM_015360 SKIV2L2 1 0.19 0.39 23 -2.36 0 26 5.04 No 55 -1.88 No 0 0 No -24 0.23 No 33 36.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 54700824 + NM_015360 SKIV2L2 1 0.73 1.4 48 8.01 73.68 24 5.92 Yes 11 0.94 Yes 0 0 No -23 0.77 Yes 47 85.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 54700829 + NM_015360 SKIV2L2 1 0.08 0.14 9 2.37 0 29 6.32 Yes 16 0.91 Yes 0 0 No -28 0.8 Yes 42 88.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 54719364 + NM_015360 SKIV2L2 1 0.05 0.13 8 -0.03 63.09 22 4.9 No 33 -2.83 No 0 0 No -21 0.77 Yes 49 46.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 54719371 + NM_015360 SKIV2L2 1 0.09 0.22 13 -0.93 0 17 4 No 4 0.01 No 0 0 No -28 0.64 No 42 25.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 54719377 + NM_015360 SKIV2L2 1 0.06 0.15 10 -1.79 0 9 3.87 No 10 0.01 No 0 0 No -22 0.39 No 53 45.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 54719978 + NM_015360 SKIV2L2 1 0.08 0.19 13 7.12 78.86 36 7.45 Yes 23 0.87 Yes 0 0 No -36 0.62 No 34 69.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 133493652 - NM_170679 SKP1 1 0.04 0.53 28 6.03 79.08 37 6.85 Yes 51 0.93 Yes 28 0.68 Yes -28 0.49 No 42 48.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 133496813 - NM_170679 SKP1 1 0.02 0.22 13 -2.12 0 16 3.48 No 14 0.61 No 0 0 No -35 0.54 No 44 58.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 133496990 - NM_170679 SKP1 1 0.01 0.14 7 9.26 86.76 22 4.96 No 9 0.72 No 0 0 No -21 0.86 Yes 49 90.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 133502965 - NM_170679 SKP1 1 0.01 0.13 7 0.55 61.85 20 5.01 No 42 1.92 Yes 29 0.29 Yes -20 0.48 No 50 56.61 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 133506730 - NM_170679 SKP1 1 0.06 0.83 34 5.32 73.56 30 4.98 No 37 0.79 Yes 29 0.66 Yes -29 0.75 Yes 41 67.86 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 133509458 - NM_170679 SKP1 1 0.03 0.43 23 10.46 97.35 45 5.84 Yes 9 0.95 Yes 0 0 No -24 0.34 No 32 64.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 133509758 - NM_170679 SKP1 1 0.03 0.28 9 1.6 62.61 17 5.18 No 76 -6.06 No 0 0 No -26 0.61 No 44 50.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 133510206 - NM_170679 SKP1 1 1.31 9.58 72 5.67 81.17 59 7.68 Yes 46 1.32 Yes 32 0.49 Yes -48 0.51 No 22 72.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 133510494 - NM_170679 SKP1 1 0.02 0.17 10 9.04 94.37 33 7.14 Yes 14 0.63 No 32 0.73 Yes -26 0.53 No 38 47.52 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 36152844 + NM_005983 SKP2 1 0.17 0.15 7 5.06 80.1 29 4.72 No 16 0.19 No 27 0.58 Yes -37 0.38 No 47 46.29 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 36157558 + NM_005983 SKP2 1 0.12 0.11 7 11.4 91.83 28 5.78 Yes 15 0.32 No 0 0 No -27 0.87 Yes 43 84.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 36164636 + NM_005983 SKP2 1 0.29 0.35 20 7.53 86.31 23 9.62 Yes 32 1.56 Yes 0 0 No -44 0.55 No 48 82.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 36178699 + NM_005983 SKP2 1 1.21 1.47 48 9.49 81.9 27 8.26 Yes 14 0.54 No 0 0 No -26 0.66 No 40 66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 36180271 + NM_005983 SKP2 1 1.95 2.31 64 6.94 77.76 29 5.36 No 25 0.98 Yes 0 0 No -26 0.75 Yes 44 75.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 36183941 + NM_005983 SKP2 1 11.39 14.99 72 4.73 88.96 28 6.29 Yes 48 1.02 Yes 27 0.81 Yes -27 0.56 No 43 56.68 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 78335121 + NM_001242869 SLAIN1 1 0.44 0.53 27 5.23 82.16 21 5 No 30 1.19 Yes 0 0 No -20 0.89 Yes 50 91.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48384744 + NM_020846 SLAIN2 1 0.19 0.36 17 6.94 85.24 26 5.29 No 68 -4.71 No 25 0.77 Yes -25 0.78 Yes 45 71.81 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 48387982 + NM_020846 SLAIN2 1 0.1 0.18 11 7.5 90.03 32 7.21 Yes 19 0.74 No 0 0 No -31 0.85 Yes 39 83.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 48389382 + NM_020846 SLAIN2 1 0.08 0.14 9 9.88 92.14 26 7.89 Yes 13 1.09 Yes 25 0.86 Yes -25 0.76 Yes 45 94.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 48396592 + NM_020846 SLAIN2 1 15.41 26.46 72 7.2 90.19 23 5.2 No 0 0.01 No 22 0.65 Yes -20 0.75 Yes 50 81.65 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 160582690 - NM_001330754 SLAMF1 1 0.05 0.22 14 10.01 86.62 29 6.7 Yes 16 1.14 Yes 0 0 No -28 0.8 Yes 42 80.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160584455 - NM_001330754 SLAMF1 1 0.12 0.54 26 12.96 85.33 23 4.74 No 71 1.19 Yes 0 0 No -26 0.49 No 48 54.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160585544 - NM_001330754 SLAMF1 1 0.06 0.26 17 -5.49 0 18 4.36 No 44 1.59 Yes 0 0 No -56 0.62 No 14 77.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 160585559 - NM_001330754 SLAMF1 1 0.81 3.76 67 9 78.61 42 9.22 Yes 29 1.61 Yes 41 0.43 Yes -46 0.7 Yes 24 68.98 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 160585559 - NM_001330754 SLAMF1 1 0.04 0.19 11 9 78.61 42 9.22 Yes 29 1.61 Yes 41 0.43 Yes -46 0.7 Yes 24 68.98 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 160585775 - NM_001330754 SLAMF1 1 0.46 2.13 59 5.62 87.88 28 5.11 No 62 -4.47 No 0 0 No -23 0.61 No 47 65.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160586919 - NM_001330754 SLAMF1 1 0.35 1.5 50 4.25 77.41 27 3.7 No 2 0.78 Yes 0 0 No -26 0.59 No 16 57.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160586939 - NM_001330754 SLAMF1 1 0.37 1.54 54 0.65 0 42 5.08 No 29 0.34 No 0 0 No -34 0.61 No 36 76.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 160587856 - NM_001330754 SLAMF1 1 0.24 0.99 39 8.82 93.17 44 7.07 Yes 40 0.24 No 0 0 No -43 0.85 Yes 27 86.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160589521 - NM_001330754 SLAMF1 1 0.08 0.36 24 6.73 75.38 20 5.33 No 63 0.55 No 0 0 No -24 0.7 Yes 46 71.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160590467 - NM_001330754 SLAMF1 1 20.1 1.57 54 11.25 93.68 40 8.14 Yes 27 0.08 No 0 0 No -39 0.37 No 31 36.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160598773 - NM_001330754 SLAMF1 1 0.11 0.35 19 3.04 87.42 16 5.03 No 26 -1.91 No 0 0 No -26 0.5 No 44 54.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160599336 - NM_001330754 SLAMF1 1 6.2 21.46 72 6.44 79.63 25 5 No 12 0.23 No 0 0 No -24 0.95 Yes 46 97.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160599670 - NM_001330754 SLAMF1 1 0.09 0.29 18 4.76 0 19 4.58 No 72 1.18 Yes 0 0 No -18 0.91 Yes 52 88.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160599926 - NM_001330754 SLAMF1 1 0.03 0.15 7 5.79 67.43 18 5.12 No 25 1.15 Yes 0 0 No -37 0.58 No 33 80.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 160600032 - NM_001330754 SLAMF1 1 0.07 0.24 14 1.7 0 22 4.58 No 66 0.62 No 0 0 No -21 0.54 No 49 58.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160600044 - NM_001330754 SLAMF1 1 0.07 0.29 13 0.41 76.33 23 4.26 No 54 0.63 No 0 0 No -22 0.53 No 48 60.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160600085 - NM_001330754 SLAMF1 1 1.55 5.56 68 6.89 78 34 4.97 No 36 0.94 Yes 0 0 No -25 0.94 Yes 45 94.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160600136 - NM_001330754 SLAMF1 1 4.24 14.94 72 8.5 89.82 29 6.86 Yes 4 0.42 No 0 0 No -28 0.96 Yes 42 96.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 160604208 - NM_001330754 SLAMF1 1 2.14 7.67 71 3.63 84.48 26 5.39 No 13 0.92 Yes 0 0 No -25 0.94 Yes 45 93.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160604500 - NM_001330754 SLAMF1 1 0.02 0.14 10 6.87 78.39 39 6.51 Yes 3 1.93 Yes 0 0 No -31 0.43 No 34 66.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160604683 - NM_001330754 SLAMF1 1 3.58 22 72 -2.27 0 34 6.18 Yes 21 1.17 Yes 0 0 No -33 0.73 Yes 37 78.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160604683 - NM_001330754 SLAMF1 1 0.37 2.38 56 -2.27 0 34 6.18 Yes 21 1.17 Yes 0 0 No -33 0.73 Yes 37 78.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160606070 - NM_001330754 SLAMF1 1 0.13 0.9 33 9.29 84.53 29 5.4 No 30 1.68 Yes 0 0 No -28 0.88 Yes 42 81.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160615540 - NM_001330754 SLAMF1 1 0.13 0.46 25 9.06 81.83 27 5.65 Yes 14 1.26 Yes 0 0 No -26 0.94 Yes 44 95.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160615653 - NM_001330754 SLAMF1 1 0.1 0.36 21 6.64 84.04 17 5.29 No 50 0.2 No 0 0 No -23 0.52 No 47 43.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160615909 - NM_001330754 SLAMF1 1 0.12 0.46 23 8.48 81.84 52 6.98 Yes 75 -1.93 No 0 0 No -37 0.68 Yes 33 68.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 160458958 - NM_001184714 SLAMF6 1 53.75 42.88 72 4.11 75.93 27 7 Yes 14 1.38 Yes 23 0.92 Yes -26 0.87 Yes 44 65.04 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 160466037 - NM_001184714 SLAMF6 1 7.17 8.21 72 7.02 78.49 22 6.59 Yes 70 1.68 Yes 0 0 No -25 0.63 No 45 71.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 160466721 - NM_001184714 SLAMF6 1 0.18 0.22 12 8.42 83.24 28 4.7 No 56 0.96 Yes 0 0 No -25 0.38 No 43 59.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160709301 + NM_021181 SLAMF7 1 0.33 2.72 61 7.92 90.67 40 8.07 Yes 27 1.61 Yes 39 0.8 Yes -39 0.52 No 31 92.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 160719827 + NM_021181 SLAMF7 1 0.03 0.22 11 7.1 82.55 26 5.6 Yes 8 1.04 Yes 0 0 No -20 0.52 No 45 68.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160719463 + NM_021181 SLAMF7 1 0.02 0.15 9 5.8 91.62 20 4.69 No 37 -2.83 No 0 0 No -25 0.45 No 51 42.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 160719827 + NM_021181 SLAMF7 1 0.15 1.11 36 7.1 82.55 26 5.6 Yes 8 1.04 Yes 0 0 No -20 0.52 No 45 68.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 160720111 + NM_021181 SLAMF7 1 0.13 1.03 41 0.55 72.41 22 5.2 No 46 2.03 Yes 0 0 No -58 0.79 Yes 12 86.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160721136 + NM_021181 SLAMF7 1 0.06 0.18 12 -5.87 76.03 26 6.55 Yes 13 0.83 Yes 0 0 No -25 0.85 Yes 45 84.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 160721977 + NM_021181 SLAMF7 1 0.04 0.26 14 -10.23 71.99 37 6.06 Yes 66 1.2 Yes 0 0 No -33 0.59 No 34 67.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 1701789 - NM_001306075 SLBP 1 0.05 0.17 7 -2.93 0 12 4.24 No 58 0.6 No 0 0 No -37 0.42 No 33 36.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 1701819 - NM_001306075 SLBP 1 0.05 0.18 12 5.45 81.74 41 4.46 No 28 0.61 No 25 0.7 Yes -25 0.82 Yes 45 90.45 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 147210354 - NM_001300842 SLC10A7 1 0.59 0.28 17 6.98 89.08 26 5.09 No 13 0.87 Yes 0 0 No -25 0.93 Yes 45 92.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 147210445 - NM_001300842 SLC10A7 1 0.36 0.15 9 7.69 75.49 29 4.89 No 7 0.69 No 0 0 No -19 0.46 No 51 54.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 147226086 - NM_001300842 SLC10A7 1 0.31 0.14 8 3.28 76.12 32 6.54 Yes 38 -3.68 No 0 0 No -31 0.72 Yes 39 89.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 147244967 - NM_001300842 SLC10A7 1 3.57 2.03 56 4.24 76.22 47 8.67 Yes 34 1.32 Yes 0 0 No -46 0.78 Yes 24 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 147253807 - NM_001300842 SLC10A7 1 0.43 0.19 11 7.14 91.4 21 5.72 Yes 52 -4.43 No 0 0 No -21 0.81 Yes 49 67.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 147333302 - NM_001300842 SLC10A7 1 0.41 0.18 8 5.42 86.43 17 5.24 No 48 0.78 Yes 0 0 No -24 0.6 No 46 64.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 147346356 - NM_001300842 SLC10A7 1 1.06 0.54 26 11.35 97.1 44 9.47 Yes 31 0.73 No 0 0 No -31 0.93 Yes 39 91.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 147395261 - NM_001300842 SLC10A7 1 0.43 0.24 13 8.68 90.75 13 6.64 Yes 0 0.87 Yes 0 0 No -38 0.74 Yes 32 80.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 147399454 - NM_001300842 SLC10A7 1 0.29 0.17 11 9.72 94.66 28 6.68 Yes 7 1.41 Yes 27 0.89 Yes -27 0.92 Yes 43 94.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 147409336 - NM_001300842 SLC10A7 1 0.27 0.14 9 3.79 0 34 8.49 Yes 21 0.66 No 0 0 No -29 0.55 No 41 77.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 147415316 - NM_001300842 SLC10A7 1 0.17 0.1 7 9.63 85.71 24 6.08 Yes 11 0.94 Yes 0 0 No -24 0.65 No 46 53.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 147422726 - NM_001300842 SLC10A7 1 0.26 0.14 9 7.44 84.23 25 5.1 No 12 0.38 No 0 0 No -24 0.93 Yes 46 94.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 147423097 - NM_001300842 SLC10A7 1 0.25 0.15 8 7.84 90.75 25 6.22 Yes 12 1.44 Yes 0 0 No -24 0.84 Yes 46 83.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 147430414 - NM_001300842 SLC10A7 1 0.26 0.18 12 7.82 92.94 24 5.02 No 24 0.85 Yes 0 0 No -23 0.95 Yes 47 96.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 147436304 - NM_001300842 SLC10A7 1 1.41 1.01 41 8.07 75.06 19 4.71 No -3 1.64 Yes 24 0.72 Yes -24 0.88 Yes 46 88.47 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 51390692 - NM_001174125 SLC11A2 1 0.95 0.24 14 4.83 83.74 29 5.83 Yes 75 1.18 Yes 0 0 No -28 0.92 Yes 42 93.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 51399461 - NM_001174125 SLC11A2 1 5 1.29 49 7.45 80.33 22 6 Yes 9 1.4 Yes 21 0.87 Yes -21 0.86 Yes 49 95.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 51402328 - NM_001174125 SLC11A2 1 1.93 0.54 23 8.9 84.1 18 5.29 No 5 1.19 Yes 23 0.74 Yes -21 0.7 Yes 49 71.91 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 127445962 + NR_046207 SLC12A2 1 0.16 0.13 7 8.64 78.16 39 7.03 Yes 26 0.19 No 0 0 No -25 0.58 No 40 43.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 127448929 + NR_046207 SLC12A2 1 0.78 0.44 23 9.43 88.09 59 10.77 Yes 7 0.97 Yes 0 0 No -19 0.72 Yes 51 74.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 127451221 + NR_046207 SLC12A2 1 1.3 1.26 49 7.51 83.34 20 5.1 No 7 0.17 No 0 0 No -19 0.4 No 51 79.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 127478817 + NR_046207 SLC12A2 1 2.72 2.9 65 8.69 90.61 29 7.3 Yes 58 1.04 Yes 0 0 No -28 0.71 Yes 42 86.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 127510235 + NR_046207 SLC12A2 1 0.13 0.14 9 0.15 71.6 19 5.94 Yes 53 1.14 Yes 0 0 No -28 0.68 Yes 42 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 127513265 + NR_046207 SLC12A2 1 0.74 0.56 26 4.63 82.06 40 8.05 Yes 27 1.61 Yes 0 0 No -39 0.59 No 31 77.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 127513265 + NR_046207 SLC12A2 1 1.8 1.42 50 4.63 82.06 40 8.05 Yes 27 1.61 Yes 0 0 No -39 0.59 No 31 77.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 67979165 - NM_001145963 SLC12A4 1 1.12 0.44 27 6.97 87.88 24 5.48 No 20 -2.04 No 23 0.66 Yes -30 0.34 No 40 43.31 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 67979186 - NM_001145963 SLC12A4 1 0.17 0.1 7 -7.82 0 12 4.24 No 71 -4.87 No 23 0.66 Yes -17 0.42 No 53 43.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 67980263 - NM_001145963 SLC12A4 1 0.54 0.22 14 -6.6 0 17 4.58 No 70 -5.07 No 21 0.83 Yes -14 0.2 No 54 26.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 67988123 - NM_001145963 SLC12A4 1 2.03 1.14 50 9.55 85.9 31 5.73 Yes 18 -0.26 No 24 0.82 Yes -30 0.64 No 40 70.71 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 67995876 - NM_001145963 SLC12A4 1 0.27 0.1 7 4.73 0 38 6.63 Yes 48 -0.31 No 0 0 No -37 0.84 Yes 33 85.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 34525389 - NM_005135 SLC12A6 1 0.39 0.15 10 4.5 82.54 51 7.12 Yes 19 0.75 No 0 0 No -27 0.64 No 43 62.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 34525407 - NM_005135 SLC12A6 1 0.76 0.4 19 -7.15 0 33 6.57 Yes 20 0.15 No 0 0 No -32 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 34530533 - NM_005135 SLC12A6 1 1.15 0.63 28 7.15 87.22 23 8.17 Yes 44 0.74 No 22 0.89 Yes -22 0.83 Yes 48 85.86 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 34532952 - NM_005135 SLC12A6 1 1.19 0.57 28 8.6 85.78 16 6.19 Yes 3 1.72 Yes 0 0 No -29 0.59 No 41 65.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 34542560 - NM_005135 SLC12A6 1 0.8 0.26 16 -4.37 0 30 5.43 No 49 1.17 Yes 29 0.48 Yes -26 0.59 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 34585357 - NM_005135 SLC12A6 1 0.66 0.19 13 1.57 69.66 34 4.7 No 71 1.24 Yes 0 0 No -33 0.71 Yes 37 69.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 34607759 - NM_005135 SLC12A6 1 0.61 0.14 7 5.35 84.42 31 6.76 Yes 18 0.26 No 0 0 No -30 0.44 No 39 55.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 1065787 - NM_006598 SLC12A7 1 1.16 0.15 10 12.04 84.21 28 6.16 Yes 15 1.03 Yes 0 0 No -27 0.89 Yes 43 85.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1078153 - NM_006598 SLC12A7 1 4.57 0.56 29 -0.52 71.9 22 4.89 No 9 1.54 Yes 34 0.29 Yes -21 0.92 Yes 49 86.35 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 1078168 - NM_006598 SLC12A7 1 1.45 0.21 12 5.03 88.32 21 3.61 No 62 0.16 No 0 0 No -23 0.54 No 47 31.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 1080203 - NM_006598 SLC12A7 1 0.83 0.19 9 7.58 87.87 54 7.33 Yes 76 -1.68 No 0 0 No -24 0.76 Yes 46 91.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 1082049 - NM_006598 SLC12A7 1 1.88 0.29 16 10.54 77.66 16 5.39 No 3 2.37 Yes 0 0 No -22 0.89 Yes 48 86.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 1085556 - NM_006598 SLC12A7 1 0.64 0.13 9 6.51 83.73 38 6.48 Yes NA NA NA 0 0 No -27 0.65 No 43 70.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 124803265 - NM_001195483 SLC12A8 1 1.82 1.22 43 7.93 86.25 39 6.46 Yes 58 0.72 No 0 0 No -38 0.53 No 32 57.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 124814664 - NM_001195483 SLC12A8 1 2.34 1.85 59 6.89 87.87 31 6.98 Yes 18 0.67 No 0 0 No -30 0.63 No 40 80.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 124826476 - NM_001195483 SLC12A8 1 2.01 0.53 19 2.99 77.75 28 7.21 Yes 15 0.53 No 27 0.86 Yes -27 0.8 Yes 43 89.81 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 124832087 - NM_001195483 SLC12A8 1 5.15 0.53 23 6.55 79.3 25 6.24 Yes 59 0.19 No 0 0 No -22 0.71 Yes 48 74.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 124838736 - NM_001195483 SLC12A8 1 4.72 0.58 30 9.75 89.45 35 5.83 Yes 22 1.47 Yes 27 0.65 Yes -34 0.58 No 36 61.02 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 100454712 + NM_020246 SLC12A9 1 1.69 0.18 9 6.91 77.93 24 5.48 No 74 1.18 Yes 0 0 No -47 0.68 Yes 23 89.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100456537 + NM_020246 SLC12A9 1 1.07 0.39 23 4.34 76.64 35 5.61 Yes 34 0.32 No 0 0 No -34 0.72 Yes 36 74.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 100454712 + NM_020246 SLC12A9 1 0.87 0.14 10 6.91 77.93 24 5.48 No 74 1.18 Yes 0 0 No -47 0.68 Yes 23 89.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100456445 + NM_020246 SLC12A9 1 1.11 0.39 23 2.34 76.78 22 6.27 Yes 9 1.85 Yes 32 0.64 Yes -21 0.77 Yes 49 91.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 100457048 + NM_020246 SLC12A9 1 0.78 0.32 16 5.78 69.27 35 4.53 No 71 -1.13 No 0 0 No -32 0.64 No 36 56.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100462181 + NM_020246 SLC12A9 1 0.21 0.1 7 1.34 73.39 28 4.15 No 71 0.07 No 0 0 No -22 0.75 Yes 48 72.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 100462600 + NM_020246 SLC12A9 1 0.38 0.18 11 4.62 83.78 22 4.97 No 31 0.46 No 0 0 No -31 0.34 No 39 62.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100462908 + NM_020246 SLC12A9 1 2.04 0.96 45 11.09 89.3 47 5.5 No 3 0.35 No 23 0.64 Yes -23 0.62 No 47 83.13 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 100462981 + NM_020246 SLC12A9 1 2.31 1.14 41 5.33 76.11 27 5.48 No 76 0.3 No 26 0.94 Yes -26 0.91 Yes 44 93.29 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 121641889 + NM_001145998 SLC15A2 1 2.62 0.19 11 -0.05 74.89 24 6.55 Yes 52 -2.6 No 0 0 No -26 0.69 Yes 34 73.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 121643163 + NM_001145998 SLC15A2 1 4.42 0.42 20 10.87 93.68 34 5.96 Yes 70 0.92 Yes 24 0.77 Yes -33 0.66 No 47 59.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 121644648 + NM_001145998 SLC15A2 1 7.31 0.46 22 2.37 77 20 8.36 Yes 75 -5.36 No 0 0 No -24 0.26 No 32 20.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 121649972 + NM_001145998 SLC15A2 1 3.16 0.26 14 9.59 92.75 18 5.42 No 40 2.13 Yes 0 0 No -23 0.8 Yes 47 84.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 121650770 + NM_001145998 SLC15A2 1 6.45 0.65 28 2.26 0 38 6.14 Yes 25 1.26 Yes 0 0 No -32 0.48 No 38 58.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 121659984 + NM_001145998 SLC15A2 1 0.95 0.11 7 5.77 81.63 28 6.24 Yes 15 1.44 Yes 0 0 No -27 0.83 Yes 43 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 60705039 - NR_027391 SLC15A3 1 0.57 0.71 28 6.31 72.15 51 6.95 Yes 22 1.22 Yes 34 0.94 Yes -34 0.88 Yes 36 96.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 60705398 - NR_027391 SLC15A3 1 0.44 0.33 19 2.46 79.04 51 8.24 Yes 69 0.33 No 0 0 No -50 0.52 No 17 68.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 60708763 - NR_027391 SLC15A3 1 154.07 79.14 72 7.19 84.83 17 6.16 Yes 4 1.82 Yes 31 0.31 Yes -31 0.71 Yes 40 81.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 60709612 - NR_027391 SLC15A3 1 0.42 0.82 33 -2.11 0 15 3.87 No 14 1.85 Yes 0 0 No -26 0.89 Yes 44 88.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 129278845 - NM_145648 SLC15A4 1 0.29 0.43 23 3.8 72.81 35 5.69 Yes 74 1.32 Yes 0 0 No -34 0.35 No 40 45.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 129283580 - NM_145648 SLC15A4 1 1.5 2 57 7.76 93.07 25 5.29 No 51 0.42 No 0 0 No -21 0.48 No 49 60.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 129283610 - NM_145648 SLC15A4 1 1.06 1.5 50 4.74 79.34 34 8.06 Yes 21 0.42 No 0 0 No -33 0.7 Yes 50 53.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 129293558 - NM_145648 SLC15A4 1 0.1 0.18 12 4.46 78.01 18 4.9 No 5 0.33 No 0 0 No -36 0.58 No 34 50.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 129293690 - NM_145648 SLC15A4 1 0.33 0.56 25 5.08 71.34 24 6.5 Yes 11 0.77 No 28 0.89 Yes -38 0.79 Yes 32 80.94 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 129293995 - NM_145648 SLC15A4 1 0.24 0.33 17 3.33 85.86 16 5.19 No 32 0.75 No 0 0 No -20 0.27 No 50 49.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 129293995 - NM_145648 SLC15A4 1 0.11 0.15 10 3.33 85.86 16 5.19 No 32 0.75 No 0 0 No -20 0.27 No 50 49.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 129294013 - NM_145648 SLC15A4 1 0.15 0.25 13 -0.18 0 15 3.87 No 14 0.76 No 0 0 No -26 0.51 No 41 55.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 129294574 - NM_145648 SLC15A4 1 0.56 0.42 26 2.88 78.2 33 5.56 Yes 39 0.67 No 0 0 No -32 0.79 Yes 38 80.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 129294599 - NM_145648 SLC15A4 1 7.06 5.32 69 3.25 69.9 27 5.29 No 70 1.38 Yes 26 0.83 Yes -26 0.81 Yes 44 85.55 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 129300198 - NM_145648 SLC15A4 1 0.21 0.14 9 7.62 86.67 28 5.07 No 48 1.79 Yes 0 0 No -60 0.51 No 43 42.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 113456716 - NM_001166496 SLC16A1 1 0.12 0.35 18 9.21 87.74 11 7.52 Yes -2 0.93 Yes 0 0 No -26 0.35 No 33 54.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 113457035 - NM_001166496 SLC16A1 1 0.2 0.51 25 9.79 88.03 36 5.48 No 23 0.45 No 0 0 No -22 0.75 Yes 48 69.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 113458470 - NM_001166496 SLC16A1 1 0.11 0.29 17 5.26 74.37 37 6.25 Yes 19 1.28 Yes 0 0 No -31 0.56 No 39 60.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80196686 + NM_001206952 SLC16A3 1 0.29 0.17 12 4.72 85.01 33 5.64 Yes 32 2.01 Yes 0 0 No -32 0.61 No 38 68.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 66266375 - NM_001174166 SLC16A6 1 0.47 0.18 11 9.88 84.69 23 5.75 Yes 10 1.08 Yes 0 0 No -24 0.42 No 30 60.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 66274428 - NM_001174166 SLC16A6 1 2.83 0.15 11 1.19 75.81 17 3.46 No 59 1.41 Yes 0 0 No -21 0.43 No 49 41.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 66277260 - NM_001174166 SLC16A6 1 4.87 0.21 13 1.63 0 28 8.66 Yes 74 0.94 Yes 0 0 No -27 0.93 Yes 43 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 66277260 - NM_001174166 SLC16A6 1 7.56 0.43 28 1.63 0 28 8.66 Yes 74 0.94 Yes 0 0 No -27 0.93 Yes 43 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 59991151 + NM_001270622 SLC16A7 1 0.6 0.11 8 5.41 74.8 52 9 Yes 39 0.46 No 0 0 No -51 0.55 No 19 68.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 59999373 + NM_001270622 SLC16A7 1 0.68 0.11 7 8.5 83.17 31 6.76 Yes 50 1.56 Yes 0 0 No -31 0.54 No 39 75.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 60036309 + NM_001270622 SLC16A7 1 1 0.17 12 4.9 79.6 21 4.72 No 61 1.55 Yes 0 0 No -21 0.81 Yes 49 74.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 60113859 + NM_001270622 SLC16A7 1 1.38 0.21 13 11.01 94.36 29 6.22 Yes 55 1.07 Yes 31 0.82 Yes -31 0.71 Yes 39 60.34 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 60154905 + NM_001270622 SLC16A7 1 6.68 1.07 42 8.09 91.38 27 5.84 Yes 65 -5.17 No 26 0.73 Yes -21 0.77 Yes 49 68.56 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 60161899 + NM_001270622 SLC16A7 1 1.19 0.17 10 0.49 65.31 29 5.19 No 61 -3.12 No 28 0.35 Yes -28 0.48 No 42 62.14 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 60177452 + NM_001270622 SLC16A7 1 0.55 0.11 8 4.6 84.41 36 7.27 Yes 23 1.21 Yes 0 0 No -35 0.69 Yes 34 67.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 60180942 + NM_001270622 SLC16A7 1 0.87 0.22 10 9.04 85.3 36 7.88 Yes 23 1.5 Yes 0 0 No -39 0.56 No 31 72.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 74304091 - NM_012434 SLC17A5 1 0.91 0.18 12 7.19 86.63 28 7.13 Yes 5 0.84 Yes 0 0 No -23 0.68 Yes 47 86.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 74308680 - NM_012434 SLC17A5 1 1.72 0.32 19 5.5 90.92 28 5.29 No 65 1.95 Yes 0 0 No -27 0.75 Yes 43 61.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 74318185 - NM_012434 SLC17A5 1 0.64 0.15 9 10.05 89.03 40 5.04 No 6 1.64 Yes 0 0 No -39 0.34 No 34 41.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 74319012 - NM_012434 SLC17A5 1 0.59 0.13 7 7.08 89.02 29 4.08 No 24 0.6 No 0 0 No -28 0.45 No 42 36.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 74332540 - NM_012434 SLC17A5 1 2.34 0.63 33 9.89 80.03 32 5.92 Yes -2 0.82 Yes 0 0 No -31 0.39 No 42 29.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 74339088 - NM_012434 SLC17A5 1 0.59 0.17 11 4.3 80.08 27 5.2 No 14 0.37 No 0 0 No -26 0.9 Yes 44 89.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 74343600 - NM_012434 SLC17A5 1 0.95 0.26 14 9.44 87.82 36 7.29 Yes 23 1.26 Yes 0 0 No -35 0.44 No 42 58.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 74353988 - NM_012434 SLC17A5 1 4.67 0.72 34 10.62 95.29 28 5.63 Yes 15 1.47 Yes 0 0 No -23 0.64 No 47 77.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 74360411 - NM_012434 SLC17A5 1 2.88 0.33 18 12.82 100 24 4.87 No 70 1.63 Yes 0 0 No -30 0.64 No 40 78.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 61584497 + NM_022082 SLC17A9 1 0.19 0.11 8 6.74 83.35 27 4.59 No 50 -1.43 No 0 0 No -26 0.71 Yes 44 84.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 61584562 + NM_022082 SLC17A9 1 21.63 10.68 71 2.43 81.55 22 5 No 9 -0.84 No 21 0.92 Yes -21 0.7 Yes 43 48.05 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 61593638 + NM_022082 SLC17A9 1 0.53 0.44 21 8.2 69.33 32 7.18 Yes 19 1.2 Yes 0 0 No -31 0.93 Yes 39 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61594882 + NM_022082 SLC17A9 1 0.19 0.22 12 6.62 77.11 31 6.08 Yes 62 -1.38 No 0 0 No -25 0.55 No 40 46.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 61594940 + NM_022082 SLC17A9 1 0.71 0.74 34 -1.77 0 30 6.32 Yes 17 0.44 No 0 0 No -29 0.91 Yes 41 89.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 61595308 + NM_022082 SLC17A9 1 0.34 0.24 15 7.49 78.69 17 4.56 No 4 0.24 No 0 0 No -22 0.93 Yes 48 94.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 61595528 + NM_022082 SLC17A9 1 0.18 0.11 7 7.76 88.64 16 4.69 No 3 0.78 Yes 0 0 No -21 0.81 Yes 49 74.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61596349 + NM_022082 SLC17A9 1 0.17 0.21 11 7.85 91.44 33 8.37 Yes NA NA NA 26 0.39 Yes -30 0.71 Yes 40 76.58 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 61596405 + NM_022082 SLC17A9 1 0.19 0.22 14 9.5 82.17 39 6.14 Yes 26 0.33 No 0 0 No -38 0.54 No 39 54.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 61598311 + NM_022082 SLC17A9 1 0.23 0.11 7 8.63 77.35 29 5.61 Yes -4 1.37 Yes 0 0 No -28 0.96 Yes 42 97.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61598331 + NM_022082 SLC17A9 1 0.33 0.18 12 5.93 73.27 29 4.67 No 16 1.54 Yes 0 0 No -24 0.9 Yes 46 95.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 46935067 - NM_001205207 SLC19A1 1 1.35 0.72 30 5.87 70.02 33 6.08 Yes -2 0.21 No 32 0.66 Yes -32 0.55 No 38 64.97 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 169435163 - NM_006996 SLC19A2 1 0.89 0.39 22 5.91 83.09 24 6.62 Yes 62 1.12 Yes 0 0 No -23 0.95 Yes 47 96.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 169445793 - NM_006996 SLC19A2 1 0.4 0.18 12 4.42 85.22 16 5.2 No 3 1.02 Yes 0 0 No -15 0.39 No 55 61.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 169450845 - NM_006996 SLC19A2 1 0.65 0.14 8 9.15 90.25 36 4.88 No 10 0.56 No 0 0 No -23 0.59 No 48 40.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 4503739 + NM_004170 SLC1A1 1 0.32 0.11 8 7.42 78.68 15 6.35 Yes 2 1.19 Yes 0 0 No -48 0.44 No 22 45.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 4516180 + NM_004170 SLC1A1 1 0.45 0.18 13 4.23 84.3 23 4.95 No 10 0.74 No 0 0 No -22 0.84 Yes 48 77.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 4517380 + NM_004170 SLC1A1 1 0.24 0.11 7 7.7 72.74 47 6.71 Yes 64 0.02 No 0 0 No -39 0.74 Yes 31 83.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 4530943 + NM_004170 SLC1A1 1 0.68 0.28 16 8.29 82.32 48 9.65 Yes 18 1.15 Yes 0 0 No -30 0.65 No 40 78.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 4581059 + NM_004170 SLC1A1 1 0.37 0.17 11 5.85 79.64 24 6.78 Yes 11 1.72 Yes 0 0 No -23 0.86 Yes 47 78.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 4584362 + NM_004170 SLC1A1 1 0.56 0.19 10 4.83 82.19 24 4.32 No 11 0.39 No 0 0 No -23 0.9 Yes 47 69.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 4584575 + NM_004170 SLC1A1 1 2.19 0.85 37 10.27 96.82 20 5.1 No 16 0.54 No 0 0 No -25 0.7 Yes 45 84.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 65238445 + NM_003038 SLC1A4 1 4.02 7.88 70 7.32 90.92 28 5.29 No 15 0.81 Yes 27 0.9 Yes -27 0.83 Yes 43 77.28 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 47280681 - NM_005628 SLC1A5 1 0.07 0.22 13 -2.53 72.91 12 4.8 No -1 0.59 No 24 0.95 Yes -20 0.8 Yes 59 53.09 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 113407390 + NM_005415 SLC20A1 1 0.17 0.19 13 9.59 82.02 24 5.48 No 68 -2.95 No 0 0 No -23 0.87 Yes 47 86.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 113409613 + NM_005415 SLC20A1 1 1.02 1.21 42 9.85 88.71 25 9.76 Yes 58 1.73 Yes 0 0 No -24 0.95 Yes 46 95.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 113410282 + NM_005415 SLC20A1 1 0.09 0.11 8 1.74 0 25 5.6 Yes 36 1.57 Yes 0 0 No -24 0.75 Yes 46 73.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 113410465 + NM_005415 SLC20A1 1 8.86 9.32 72 10.77 99.45 32 6.76 Yes 7 0.45 No 31 0.58 Yes -31 0.54 No 39 58.43 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 113416527 + NM_005415 SLC20A1 1 1.16 1.5 58 1.67 0 28 5.29 No 21 0 No 27 0.48 Yes -27 0.81 Yes 43 43.54 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 113416550 + NM_005415 SLC20A1 1 0.46 0.63 25 9.23 90.63 30 5.66 Yes 17 0.24 No 29 0.81 Yes -29 0.85 Yes 41 85.81 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 42277189 - NM_001257180 SLC20A2 1 3.96 0.32 18 5.87 75.17 39 6.53 Yes 26 1.06 Yes 0 0 No -28 0.79 Yes 42 72.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42328720 - NM_001257180 SLC20A2 1 16.69 1.33 51 12.13 83.72 29 5.74 Yes 16 1.47 Yes 28 0.97 Yes -28 0.82 Yes 42 92.17 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 4853700 - NM_005116 SLC23A2 1 1.63 0.13 9 7.78 95.65 19 4.64 No 55 0.29 No 0 0 No -19 0.66 No 51 78.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 4882445 - NM_005116 SLC23A2 1 2.56 0.35 18 5.55 69.97 27 6.39 Yes 14 0.65 No 0 0 No -26 0.86 Yes 44 89.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 4917522 - NM_005116 SLC23A2 1 1.76 0.35 15 13.69 92.84 23 5.67 Yes 53 2.39 Yes 0 0 No -22 0.89 Yes 48 93.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 4951562 - NM_005116 SLC23A2 1 56.53 2.69 60 7 0 28 6.14 Yes 53 0.63 No 23 0.6 Yes -23 0.65 No 47 66.65 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 4952430 - NM_005116 SLC23A2 1 1.71 0.1 7 3.58 81.45 24 4.93 No 21 0.79 Yes 0 0 No -23 0.44 No 37 47.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 19164147 - NR_046298 SLC25A1 1 0.29 0.63 32 -1.14 0 15 4.24 No 74 2.38 Yes 0 0 No -28 0.81 Yes 42 75.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19164156 - NR_046298 SLC25A1 1 0.04 0.1 7 -8.71 65.06 20 5.12 No 65 2.39 Yes 0 0 No -19 0.77 Yes 51 53.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 19164417 - NR_046298 SLC25A1 1 0.09 0.17 10 2.48 79.94 22 5.1 No 58 1.76 Yes 0 0 No -21 0.94 Yes 49 85.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79680291 + NM_001270888 SLC25A10 1 7.78 2.25 61 7.07 93.07 26 5.1 No 50 0.01 No 25 0.7 Yes -23 0.68 Yes 47 72.8 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 79681994 + NM_001270888 SLC25A10 1 2 0.56 30 2.48 0 19 4.58 No 19 0.54 No 0 0 No -22 0.71 Yes 48 84.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79683710 + NM_001270888 SLC25A10 1 0.32 0.15 8 4.72 90.64 23 4.79 No 48 -2 No 22 0.87 Yes -19 0.63 No 51 61.81 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 79684511 + NM_001270888 SLC25A10 1 0.93 0.67 31 6.11 80.65 29 7.31 Yes 16 1.52 Yes 0 0 No -28 0.83 Yes 42 85.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79685081 + NM_001270888 SLC25A10 1 4.78 2.5 62 9.85 87.82 29 7.07 Yes 16 0.67 No 0 0 No -28 0.61 No 42 61.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79686593 + NM_001270888 SLC25A10 1 0.37 0.17 10 8.89 82.87 23 7.87 Yes 32 1.58 Yes 0 0 No -22 0.77 Yes 41 64.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 4841509 - NM_001165417 SLC25A11 1 0.04 0.11 7 4.76 79.26 29 7 Yes 56 1.96 Yes 0 0 No -28 0.88 Yes 42 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172647385 - NM_003705 SLC25A12 1 0.89 0.64 34 1.39 73.27 42 6.61 Yes 3 1.67 Yes 0 0 No -22 0.76 Yes 48 85.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172670031 - NM_003705 SLC25A12 1 0.2 0.14 7 6.36 81.67 19 7.42 Yes 6 0.51 No 25 0.8 Yes -34 0.44 No 36 61.32 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 172671710 - NM_003705 SLC25A12 1 2.84 1.86 53 4.15 82.79 37 5.77 Yes 43 0.52 No 0 0 No -23 0.73 Yes 34 79.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 172681124 - NM_003705 SLC25A12 1 0.4 0.22 13 7.2 85.04 23 5.68 Yes 10 0.69 No 0 0 No -26 0.52 No 44 65.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 172690999 - NM_003705 SLC25A12 1 0.15 0.15 9 7.83 76.94 19 5.7 Yes 6 0.25 No 0 0 No -18 0.67 Yes 52 51.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 172694244 - NM_003705 SLC25A12 1 0.33 0.38 21 6.13 79.29 55 6.17 Yes 0 1.38 Yes 0 0 No -27 0.68 Yes 43 51.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 172704787 - NM_003705 SLC25A12 1 1.51 1.24 43 6.67 91.09 20 5.64 Yes 7 0.06 No 28 0.89 Yes -19 0.71 Yes 51 86.74 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 172707587 - NM_003705 SLC25A12 1 3.22 2.82 67 5.03 77.09 38 7.44 Yes 37 0.84 Yes 0 0 No -37 0.83 Yes 33 79.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172710188 - NM_003705 SLC25A12 1 0.18 0.18 11 0.85 88.76 25 4.88 No 12 0.98 Yes 0 0 No -24 0.94 Yes 46 95.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 172723614 - NM_003705 SLC25A12 1 0.15 0.11 7 7.9 76.03 35 6.16 Yes 59 -0.62 No 0 0 No -21 0.69 Yes 36 72.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 172723794 - NM_003705 SLC25A12 1 1.48 1.14 45 3.82 80.01 32 6.85 Yes 61 -2.73 No 0 0 No -31 0.89 Yes 39 89.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 172728352 - NM_003705 SLC25A12 1 0.56 0.4 18 6.92 86.2 22 6.85 Yes 9 0.58 No 0 0 No -21 0.93 Yes 49 90.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 172728422 - NM_003705 SLC25A12 1 0.35 0.26 14 4.19 0 42 5.37 No 60 -0.92 No 0 0 No -30 0.64 No 40 78.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 95763230 - NM_001160210 SLC25A13 1 0.42 0.29 17 5.7 83.85 47 7.2 Yes 34 1.5 Yes 0 0 No -36 0.43 No 34 63.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 95799256 - NM_001160210 SLC25A13 1 2.38 0.94 41 7.37 83.42 21 5.2 No 8 0.76 No 20 0.8 Yes -20 0.57 No 50 73.08 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 95799462 - NM_001160210 SLC25A13 1 0.77 0.38 22 6.86 84.59 24 5.39 No 11 1.37 Yes 29 0.89 Yes -26 0.54 No 44 57.62 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 95820550 - NM_001160210 SLC25A13 1 0.24 0.14 9 -12.07 0 18 4.3 No 55 0.42 No 0 0 No -57 0.54 No 13 71.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 95825417 - NM_001160210 SLC25A13 1 0.72 0.47 28 6.27 85.66 18 5.37 No 5 0.99 Yes 0 0 No -25 0.76 Yes 53 64.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 95869440 - NM_001160210 SLC25A13 1 0.25 0.14 7 9.26 86.46 33 4.02 No 44 1.2 Yes 0 0 No -26 0.79 Yes 44 66.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 95904554 - NM_001160210 SLC25A13 1 2.19 0.99 38 7.62 82.12 33 6.08 Yes 32 0.84 Yes 0 0 No -32 0.34 No 40 48.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 95914064 - NM_001160210 SLC25A13 1 1.21 0.67 32 6.94 86.05 32 6.15 Yes 73 -2.66 No 0 0 No -25 0.41 No 45 40.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 95939004 - NM_001160210 SLC25A13 1 1.36 0.49 30 10.08 83.95 22 5.68 Yes 9 1.5 Yes 28 0.7 Yes -21 0.57 No 49 75.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chrX 129474080 + NR_104107 SLC25A14 1 12.17 1.47 47 11.03 84.01 30 6.68 Yes 17 1.37 Yes 30 0.86 Yes -30 0.62 No 41 68.4 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 129493020 + NR_104107 SLC25A14 1 5.5 0.68 33 5.77 77.6 25 6.52 Yes 12 1.09 Yes 24 0.96 Yes -24 0.87 Yes 46 95.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 41376270 + NM_014252 SLC25A15 1 2.78 0.96 39 9.5 85.55 19 4.53 No 60 1.49 Yes 22 0.85 Yes -31 0.5 No 39 46.14 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 70249020 - NM_001324313 SLC25A16 1 0.45 0.15 8 2.2 0 40 8.66 Yes 27 1 Yes 0 0 No -39 0.46 No 28 62.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 70253285 - NM_001324313 SLC25A16 1 0.62 0.25 14 4.26 68.75 39 6.17 Yes 51 1.12 Yes 0 0 No -38 0.46 No 32 49.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 70256236 - NM_001324313 SLC25A16 1 2.01 0.9 41 5.18 69.33 32 6.56 Yes 37 0.91 Yes 0 0 No -31 0.43 No 39 52.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 70256270 - NM_001324313 SLC25A16 1 0.99 0.47 25 8.7 84.71 26 4.91 No 3 0.92 Yes 25 0.88 Yes -25 0.77 Yes 45 82.11 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 70259821 - NM_001324313 SLC25A16 1 0.5 0.26 14 0.89 69.37 74 5.64 Yes 70 0.53 No 0 0 No -30 0.69 Yes 46 40.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 70266496 - NM_001324313 SLC25A16 1 0.32 0.11 7 8.02 86.34 20 5.55 No 47 1.07 Yes 24 0.88 Yes -24 0.7 Yes 46 69.59 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 70276943 - NM_001324313 SLC25A16 1 1.92 0.32 20 4.33 69.85 30 5.91 Yes 17 0.01 No 29 0.55 Yes -29 0.79 Yes 41 86.08 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 70277020 - NM_001324313 SLC25A16 1 0.39 0.1 7 -6.21 57.55 36 6.32 Yes 35 1 Yes 0 0 No -20 0.5 No 61 13.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 70277023 - NM_001324313 SLC25A16 1 1.18 0.29 17 -0.1 58.77 33 6.08 Yes 32 1.01 Yes 32 0.33 Yes -32 0.39 No 38 40.72 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 70285428 - NM_001324313 SLC25A16 1 2.4 0.54 33 13.25 93.17 32 6.14 Yes 11 1.51 Yes 0 0 No -31 0.46 No 39 56.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41172313 - NR_104235 SLC25A17 1 0.46 0.61 30 8.12 90.48 37 4.61 No 14 1.06 Yes 26 0.89 Yes -26 0.75 Yes 44 83.81 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 41193341 - NR_104235 SLC25A17 1 1.22 1.25 52 10.56 92.52 30 7.44 Yes 52 1.45 Yes 29 0.95 Yes -29 0.97 Yes 41 95.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73283115 - NM_001126122 SLC25A19 1 2.15 0.31 18 7.01 86.16 49 7.02 Yes 36 0.23 No 0 0 No -27 0.67 Yes 43 69.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 73284673 - NM_001126122 SLC25A19 1 81.82 10.39 72 10.32 88.62 35 5.63 Yes 22 0.05 No 22 0.81 Yes -30 0.64 No 40 75.49 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 792407 - NM_024698 SLC25A22 1 0.68 0.29 16 2.43 64.04 57 7.81 Yes NA NA NA 0 0 No -25 0.69 Yes 41 49.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 792985 - NM_024698 SLC25A22 1 0.4 0.14 8 -0.71 0 29 7.42 Yes 16 0.73 No 0 0 No -28 0.94 Yes 42 93.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 795165 - NM_024698 SLC25A22 1 6.95 0.86 38 1.03 0 34 6.49 Yes 21 1.98 Yes 22 0.87 Yes -33 0.72 Yes 37 72.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 6442109 - NM_024103 SLC25A23 1 1.3 2.03 60 6.01 83.44 15 6.93 Yes 2 0.08 No 0 0 No -19 0.55 No 51 79.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 6443668 - NM_024103 SLC25A23 1 0.34 0.54 27 0.34 76.33 31 6.01 Yes 49 1.28 Yes 30 0.74 Yes -30 0.84 Yes 40 71.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 6452502 - NM_024103 SLC25A23 1 0.11 0.14 7 -2.26 0 13 4.36 No 37 -3.13 No 19 0.31 Yes -59 0.46 No 65 21.91 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 6454192 - NM_024103 SLC25A23 1 0.37 0.44 23 3.96 73.07 33 6.24 Yes 73 -3.86 No 0 0 No -28 0.52 No 38 71.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 6454236 - NM_024103 SLC25A23 1 0.36 0.44 23 -0.09 69.33 35 5.49 No 29 -3.28 No 0 0 No -34 0.88 Yes 36 78.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 6456104 - NM_024103 SLC25A23 1 6.46 11.74 72 7.31 79.18 18 5.5 No 29 0.37 No 27 0.81 Yes -27 0.84 Yes 43 70.15 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 6457648 - NM_024103 SLC25A23 1 0.22 0.26 16 7.84 80.13 25 6.4 Yes 12 1.47 Yes 0 0 No -24 0.89 Yes 46 90.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6459309 - NM_024103 SLC25A23 1 0.15 0.14 8 -3.19 61.77 32 6.06 Yes 3 0.73 No 0 0 No -15 0.4 No 55 28.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 130864358 + NR_049766 SLC25A25 1 0.57 0.21 13 7.41 83.96 50 7.94 Yes 37 0.98 Yes 20 0.38 Yes -49 0.95 Yes 21 96.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 66288988 + NM_173471 SLC25A26 1 0.15 0.1 7 4.48 85.86 17 6.93 Yes 4 1.26 Yes 0 0 No -25 0.38 No 45 54.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 66326788 + NM_173471 SLC25A26 1 0.56 0.36 19 12.27 92.83 39 6.36 Yes 26 0.83 Yes 0 0 No -32 0.74 Yes 38 75.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 66333627 + NM_173471 SLC25A26 1 0.16 0.1 7 9.71 90.31 23 4.95 No 72 0.8 Yes 0 0 No -22 0.56 No 48 46.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 66354876 + NM_173471 SLC25A26 1 4.19 2.26 58 11.18 97.96 39 7.27 Yes 64 1.32 Yes 24 0.73 Yes -24 0.69 Yes 46 74.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 66406454 + NM_173471 SLC25A26 1 1.79 0.92 41 7.25 85.1 20 5.46 No 7 0.17 No 27 0.4 Yes -27 0.39 No 50 40.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 66418815 + NM_173471 SLC25A26 1 0.25 0.18 10 3.31 76.35 31 8.31 Yes 31 -4.21 No 0 0 No -30 0.9 Yes 40 92.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 66421625 + NM_173471 SLC25A26 1 0.8 0.4 23 7.53 88 17 5.26 No 4 0.49 No 32 0.94 Yes -32 0.74 Yes 38 79.53 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 66428833 + NM_173471 SLC25A26 1 0.26 0.18 8 8.2 88.74 28 6.5 Yes 29 0.58 No 34 0.61 Yes -34 0.32 No 46 27.76 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 101372375 - NM_031212 SLC25A28 1 2.55 0.96 40 3.86 74.59 27 5.74 Yes 14 0.39 No 29 0.67 Yes -26 0.86 Yes 44 81.92 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 101373027 - NM_031212 SLC25A28 1 0.74 0.28 15 11.07 89.77 34 5.97 Yes 21 1.41 Yes 0 0 No -33 0.91 Yes 37 95.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 101375271 - NM_031212 SLC25A28 1 0.9 0.38 20 4.43 87.54 27 5.54 No 22 1.51 Yes 0 0 No -34 0.6 No 36 90.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 101375274 - NM_031212 SLC25A28 1 0.8 0.31 17 3.77 85.17 24 5.28 No 19 1.52 Yes 0 0 No -31 0.63 No 39 91.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 98989210 + NM_213611 SLC25A3 1 1.13 12.32 71 7.41 74.23 30 5.39 No 17 0.99 Yes 29 0.93 Yes -29 0.94 Yes 41 96.23 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 98991123 + NM_213611 SLC25A3 1 0.02 0.33 19 5.35 86.01 26 5.84 Yes 13 0.48 No 0 0 No -25 0.9 Yes 45 96.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 98992416 + NM_213611 SLC25A3 1 0.01 0.15 10 -0.75 66.15 21 5.2 No 38 1.71 Yes 0 0 No -20 0.65 No 50 53.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 98995147 + NM_213611 SLC25A3 1 0.01 0.15 10 -18.03 0 55 5.43 No 68 0.76 No 0 0 No -26 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 45970454 - NM_001286806 SLC25A30 1 9.22 5.19 69 10.13 73.79 30 6.86 Yes 17 2.54 Yes 0 0 No -29 0.94 Yes 41 94.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 45972200 - NM_001286806 SLC25A30 1 1.56 0.53 28 7.59 97.77 25 5.1 No 12 0.34 No 0 0 No -24 0.58 No 52 57.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 45981916 - NM_001286806 SLC25A30 1 0.29 0.17 10 3.02 79.24 27 6.24 Yes 14 0.69 No 0 0 No -26 0.87 Yes 44 93.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 104412770 - NR_102337 SLC25A32 1 0.11 0.22 10 -6.43 0 32 5.82 Yes 19 0.31 No 0 0 No -31 0.7 Yes 39 75.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 104413862 - NR_102337 SLC25A32 1 0.71 1.25 49 5.57 84.42 25 5.2 No 47 0.13 No 0 0 No -25 0.47 No 45 47.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 104413888 - NR_102337 SLC25A32 1 0.11 0.18 12 -2.91 74.74 34 6.24 Yes 57 0.26 No 0 0 No -33 0.86 Yes 37 86.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 104413918 - NR_102337 SLC25A32 1 0.06 0.14 8 -0.16 71.91 19 4.86 No 27 0.26 No 31 0.71 Yes -56 0.49 No 14 39.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 104417090 - NR_102337 SLC25A32 1 2477.06 217.24 72 6.57 82.76 18 6.89 Yes 5 1.48 Yes 25 0.6 Yes -31 0.49 No 45 52.98 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 104418826 - NR_102337 SLC25A32 1 9.69 1.03 42 7.31 82.5 26 6.08 Yes 38 1.91 Yes 0 0 No -25 0.97 Yes 45 96.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 9610244 + NM_032315 SLC25A33 1 0.91 0.15 10 8.34 87.44 25 5.07 No 12 1.52 Yes 0 0 No -24 0.61 No 46 80.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 9616239 + NM_032315 SLC25A33 1 1.65 0.72 35 6.82 77.81 38 6.63 Yes 25 0.12 No 0 0 No -32 0.5 No 38 65.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 9626284 + NM_032315 SLC25A33 1 0.43 0.19 12 6.93 84.82 23 7.35 Yes 10 1.39 Yes 0 0 No -22 0.91 Yes 48 93.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 140661403 + NM_018155 SLC25A36 1 0.15 0.11 7 5.82 73.39 28 5.57 Yes 15 -2.16 No 0 0 No -27 0.72 Yes 43 56.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 140682419 + NM_018155 SLC25A36 1 0.19 0.14 10 5.36 73.3 31 5.72 Yes 18 1.09 Yes 0 0 No -26 0.81 Yes 44 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 140685189 + NM_018155 SLC25A36 1 3.56 2.69 61 10.04 87.72 29 7.68 Yes 16 0.88 Yes 28 0.74 Yes -28 0.46 No 43 51.01 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 140685775 + NM_018155 SLC25A36 1 17.76 12.83 72 9.37 83.66 25 5 No 39 1.07 Yes 23 0.8 Yes -23 0.7 Yes 47 53 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 140685841 + NM_018155 SLC25A36 1 3.78 2.78 66 10.7 84.92 18 4.29 No 5 1.24 Yes 22 0.85 Yes -22 0.59 No 40 62.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 23389197 + NM_016612 SLC25A37 1 3.63 0.89 38 10.43 89.32 27 5.17 No 47 0.91 Yes 26 0.68 Yes -26 0.63 No 45 60.56 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 23400600 + NM_016612 SLC25A37 1 2.37 0.76 27 9.98 87.82 28 6.41 Yes 15 0.9 Yes 27 0.89 Yes -27 0.53 No 43 80.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 39430852 + NM_017875 SLC25A38 1 0.45 0.44 24 1.41 82.98 31 5.41 No 35 0.82 Yes 30 0.65 Yes -30 0.88 Yes 40 81.75 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 39435015 + NM_017875 SLC25A38 1 0.09 0.13 9 3.19 0 33 4.64 No 20 0.99 Yes 0 0 No -32 0.81 Yes 38 93.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 39435905 + NM_017875 SLC25A38 1 0.12 0.15 10 3.97 0 24 5.84 Yes 50 2.3 Yes 0 0 No -28 0.64 No 42 68.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 39435940 + NM_017875 SLC25A38 1 0.11 0.13 8 4.13 73.46 27 4.86 No 46 0.47 No 0 0 No -27 0.71 Yes 43 59.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 39437862 + NM_017875 SLC25A38 1 0.12 0.19 13 6.55 91.2 25 5.41 No 12 0.4 No 19 0.78 Yes -24 0.76 Yes 46 72.67 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 42398118 - NM_001321240 SLC25A39 1 0.79 2.15 62 9.85 76.93 51 7.32 Yes 64 -1.29 No 29 0.5 Yes -25 0.49 No 37 40.85 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 42399121 - NM_001321240 SLC25A39 1 0.04 0.17 9 -1.25 71.01 18 4.9 No 57 0.25 No 0 0 No -60 0.75 Yes 10 59.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 42400221 - NM_001321240 SLC25A39 1 6984.69 379.18 72 7.34 76.95 27 5.29 No 14 1.16 Yes 26 0.92 Yes -26 0.74 Yes 44 80.38 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 42400945 - NM_001321240 SLC25A39 1 0.38 0.47 24 -6.88 0 17 4.8 No 54 1.07 Yes 0 0 No -16 0.2 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 42400959 - NM_001321240 SLC25A39 1 2.96 3.88 69 1.83 73.96 24 5 No 40 1.08 Yes 26 0.29 Yes -18 0.54 No 52 65.86 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 42401169 - NM_001321240 SLC25A39 1 0.31 0.39 23 0.18 57.18 38 7.51 Yes 25 0.63 No 20 0.71 Yes -20 0.56 No 49 17.88 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 186065140 + NM_001151 SLC25A4 1 0.06 0.14 10 10.73 88.62 20 3.95 No 43 2.18 Yes 0 0 No -27 0.72 Yes 43 65.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 186066508 + NM_001151 SLC25A4 1 0.09 0.24 14 7.2 83.92 27 5.48 No 4 1.14 Yes 26 0.83 Yes -26 0.71 Yes 50 55.71 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 186067708 + NM_001151 SLC25A4 1 0.72 2.01 55 8.56 88.8 37 5.56 Yes 37 0.88 Yes 0 0 No -23 0.64 No 47 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 87466085 - NM_018843 SLC25A40 1 2.17 1.78 54 -1.62 61.73 50 7.07 Yes 37 0.97 Yes 0 0 No -49 0.74 Yes 21 88.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87466109 - NM_018843 SLC25A40 1 0.44 0.35 18 0.26 0 26 5.1 No 13 1.01 Yes 0 0 No -25 0.85 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 87471357 - NM_018843 SLC25A40 1 0.63 0.5 27 3.85 74.88 33 7.29 Yes 47 0.37 No 32 0.73 Yes -32 0.8 Yes 38 86.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 87473369 - NM_018843 SLC25A40 1 3.29 2.33 64 8.18 92.63 25 5 No 12 0.92 Yes 0 0 No -24 0.93 Yes 46 86.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 87478756 - NM_018843 SLC25A40 1 0.24 0.21 14 7.87 87.16 25 5.99 Yes 26 -2.05 No 0 0 No -22 0.8 Yes 48 92.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 87478756 - NM_018843 SLC25A40 1 0.26 0.21 14 7.87 87.16 25 5.99 Yes 26 -2.05 No 0 0 No -22 0.8 Yes 48 92.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 87485705 - NM_018843 SLC25A40 1 3.01 3.43 68 7.04 83.24 48 6.24 Yes 9 0.45 No 21 0.38 Yes -46 0.37 No 53 44.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 87488604 - NM_018843 SLC25A40 1 1.68 1.13 39 6.99 85.02 18 6.08 Yes 5 1.25 Yes 0 0 No -30 0.54 No 53 73.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 87489485 - NM_018843 SLC25A40 1 19.6 12.14 72 5.71 81.95 26 5.1 No 45 1.47 Yes 25 0.91 Yes -25 0.89 Yes 45 84.23 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 87504850 - NM_018843 SLC25A40 1 2.01 1.25 48 6.62 94.46 28 5.13 No 43 0.22 No 0 0 No -28 0.72 Yes 42 81.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19186853 + NM_178526 SLC25A42 1 3.89 0.33 19 9.57 88.27 23 5.06 No 66 0.22 No 0 0 No -22 0.78 Yes 48 80.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19209850 + NM_178526 SLC25A42 1 1.11 0.26 13 4.98 80.99 25 6.48 Yes 73 -0.25 No 0 0 No -24 0.85 Yes 46 86.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19221285 + NM_178526 SLC25A42 1 1.57 0.32 20 8.04 79.18 26 5.66 Yes 64 -4.96 No 0 0 No -26 0.65 No 44 42.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118544244 + NM_145305 SLC25A43 1 1.03 0.36 20 10.69 86.85 18 4.84 No 44 -2.17 No 0 0 No -20 0.57 No 50 62.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118553221 + NM_145305 SLC25A43 1 0.87 0.21 12 6.94 73.68 27 8.18 Yes 14 2.02 Yes 0 0 No -26 0.87 Yes 44 91.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 118560144 + NM_145305 SLC25A43 1 2.78 0.86 40 11.52 90.66 19 5.53 No 6 1.12 Yes 0 0 No -25 0.6 No 46 57.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 118585812 + NM_145305 SLC25A43 1 2.27 0.6 26 4.77 71.65 15 6.03 Yes 2 1.04 Yes 0 0 No -33 0.43 No 37 81.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 156177909 + NR_104408 SLC25A44 1 0.24 0.24 14 7.53 75.87 26 6.63 Yes 13 2.58 Yes 0 0 No -25 0.81 Yes 45 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156177956 + NR_104408 SLC25A44 1 0.14 0.13 8 5.7 74.59 21 5.2 No 60 2.55 Yes 0 0 No -20 0.72 Yes 50 66.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 65144895 - NM_001278251 SLC25A45 1 2.76 1.06 44 6.15 82.53 32 6.1 Yes 19 1.09 Yes 23 0.87 Yes -23 0.77 Yes 39 51.33 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 65144895 - NM_001278251 SLC25A45 1 0.65 0.26 13 6.15 82.53 32 6.1 Yes 19 1.09 Yes 23 0.87 Yes -23 0.77 Yes 39 51.33 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 65146953 - NM_001278251 SLC25A45 1 0.37 0.18 12 3.95 72.81 27 6.23 Yes 44 0.54 No 0 0 No -26 0.77 Yes 44 82.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 65149448 - NM_001278251 SLC25A45 1 3.14 0.31 18 -3.93 72.57 23 6.31 Yes 10 0.4 No 20 0.62 Yes -22 0.9 Yes 48 74.88 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 110079441 + NM_001303250 SLC25A46 1 0.06 0.13 9 5.64 0 18 4.47 No 46 0.15 No 0 0 No -30 0.59 No 40 72.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 110084332 + NM_001303250 SLC25A46 1 0.22 0.57 28 4.27 80.26 16 4.69 No 3 0.03 No 0 0 No -19 0.73 Yes 51 83.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 110091146 + NM_001303250 SLC25A46 1 0.08 0.22 10 7.01 81.43 24 6.61 Yes 30 0.82 Yes 25 0.75 Yes -27 0.32 No 47 57.25 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 110091695 + NM_001303250 SLC25A46 1 0.81 1.88 56 7.88 85.05 17 5.36 No 43 1.94 Yes 24 0.89 Yes -24 0.77 Yes 46 80.88 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 110096905 + NM_001303250 SLC25A46 1 0.07 0.21 12 -11.65 80.08 24 5.38 No 21 0.71 No 0 0 No -23 0.86 Yes 47 74.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 110097146 + NM_001303250 SLC25A46 1 0.11 0.33 21 -3.1 0 13 4.36 No 39 -2.81 No 20 0.85 Yes -20 0.57 No 50 38.14 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 118603629 + NM_001152 SLC25A5 1 0.03 0.31 19 0.76 0 9 3.87 No 27 1.39 Yes 0 0 No -40 0.63 No 30 75.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 118604058 + NM_001152 SLC25A5 1 0.06 0.69 34 7.89 83.49 15 5.38 No 2 0.13 No 0 0 No -23 0.57 No 48 63.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 37883346 - NR_024873 SLC25A51 1 2.6 0.39 26 10.12 85.3 40 6.4 Yes 27 1.31 Yes 0 0 No -39 0.74 Yes 35 82.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37885745 - NR_024873 SLC25A51 1 1.45 0.22 16 8.19 81.27 35 7.93 Yes 26 -2.34 No 0 0 No -34 0.79 Yes 36 85.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37888590 - NR_024873 SLC25A51 1 649.33 95.47 72 8.25 91.22 26 6.49 Yes 13 0.51 No 23 0.86 Yes -25 0.64 No 45 82.64 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 37888590 - NR_024873 SLC25A51 1 1.65 0.21 14 8.25 91.22 26 6.49 Yes 13 0.51 No 23 0.86 Yes -25 0.64 No 45 82.64 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 37893730 - NR_024873 SLC25A51 1 2 0.35 20 3.56 66.58 31 6.61 Yes 18 0.4 No 0 0 No -35 0.63 No 35 72.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 37893797 - NR_024873 SLC25A51 1 11.24 1.71 56 9.27 85.16 25 5.57 Yes 22 0.58 No 0 0 No -24 0.88 Yes 46 90.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37899939 - NR_024873 SLC25A51 1 4.05 1.1 44 -4.75 0 12 3.98 No 21 0.33 No 0 0 No -33 0.8 Yes 37 84.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37900439 - NR_024873 SLC25A51 1 0.37 0.1 7 8.15 85.37 25 6.4 Yes 30 0.88 Yes 0 0 No -24 0.81 Yes 46 89.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37903555 - NR_024873 SLC25A51 1 20.58 5.36 69 11 85.38 33 6.52 Yes 20 1.14 Yes 0 0 No -36 0.56 No 34 85.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 149359904 + NM_000112 SLC26A2 1 2.26 0.46 25 8.94 86.27 31 6 Yes 61 1.12 Yes 0 0 No -30 0.84 Yes 40 84.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48664541 - NM_001040454 SLC26A6 1 2.47 0.17 11 5.66 71.68 85 9.16 Yes 23 1.48 Yes 25 0.85 Yes -35 0.93 Yes 35 94.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 48667120 - NM_001040454 SLC26A6 1 0.89 0.1 7 8.17 79.94 30 5.82 Yes 17 0.57 No 0 0 No -29 0.83 Yes 41 87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48668560 - NM_001040454 SLC26A6 1 1.56 0.13 9 3.07 73.9 19 4.8 No 19 0.95 Yes 18 0.13 Yes -18 0.9 Yes 52 81.16 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 48669231 - NM_001040454 SLC26A6 1 20.64 2.08 65 3.07 0 22 5.87 Yes 9 1.68 Yes 24 0.79 Yes -21 0.76 Yes 49 58.41 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 48669526 - NM_001040454 SLC26A6 1 1.37 0.14 9 3.98 68.41 71 8.84 Yes 58 2.8 Yes 39 0.79 Yes -39 0.92 Yes 31 94.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 48669526 - NM_001040454 SLC26A6 1 1.22 0.17 11 3.98 68.41 71 8.84 Yes 58 2.8 Yes 39 0.79 Yes -39 0.92 Yes 31 94.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 48669771 - NM_001040454 SLC26A6 1 2.93 0.46 24 7.09 85.08 22 5.1 No 9 0.76 No 21 0.95 Yes -21 0.82 Yes 49 90.34 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 48670559 - NM_001040454 SLC26A6 1 3.99 0.71 32 5.31 79.3 33 5.92 Yes 47 1.5 Yes 32 0.83 Yes -32 0.87 Yes 38 92.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 153750735 + NM_001317929 SLC27A3 1 2.38 0.13 9 7.42 84.04 39 6.24 Yes 65 -2.87 No 0 0 No -39 0.35 No 38 62.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 131112739 + NM_005094 SLC27A4 1 0.42 0.19 13 -2.85 0 14 4.47 No 64 -2.62 No 25 0.92 Yes -32 0.28 No 38 74.93 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 131122693 + NM_005094 SLC27A4 1 0.99 0.53 24 6.27 77.58 23 5.2 No 24 0.36 No 0 0 No -22 0.63 No 48 66.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 44194999 + NM_001078177 SLC29A1 1 9.67 1.46 48 7.57 84.92 23 6.08 Yes 10 1.38 Yes 19 0.89 Yes -22 0.96 Yes 48 96.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 44194999 + NM_001078177 SLC29A1 1 171.13 25.54 72 7.57 84.92 23 6.08 Yes 10 1.38 Yes 19 0.89 Yes -22 0.96 Yes 48 96.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 44197280 + NM_001078177 SLC29A1 1 0.09 0.1 7 4.51 79.62 16 5.48 No 3 0.57 No 0 0 No -15 0.43 No 55 62.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 44200357 + NM_001078177 SLC29A1 1 0.27 0.35 15 4.32 73.81 30 6.23 Yes 75 -5.85 No 0 0 No -32 0.36 No 37 66.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 44200627 + NM_001078177 SLC29A1 1 1.4 1.64 50 -0.15 62.01 58 7.94 Yes NA NA NA 0 0 No -27 0.51 No 45 23.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 44200719 + NM_001078177 SLC29A1 1 0.24 0.29 17 2.06 73.75 48 6.43 Yes 35 0.55 No 0 0 No -38 0.85 Yes 32 93.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 66135358 - NM_001300869 SLC29A2 1 2.25 0.18 9 9.21 86.21 20 5.1 No 66 -3.31 No 19 0.71 Yes -22 0.71 Yes 48 82.96 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 73098206 + NM_001174098 SLC29A3 1 2.32 0.18 12 7.7 82.25 33 6.63 Yes 20 1.57 Yes 0 0 No -32 0.89 Yes 38 92.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43396612 - NM_006516 SLC2A1 1 0.19 0.13 8 8.42 91.44 16 5.29 No 3 0.38 No 26 0.64 Yes -15 0.61 No 55 64.32 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 43417602 - NM_006516 SLC2A1 1 0.63 0.43 24 11.19 87.28 19 4.54 No 67 1.61 Yes 24 0.53 Yes -24 0.82 Yes 46 73.49 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 24200766 + NM_001024939 SLC2A11 1 0.93 0.17 9 6.66 83.03 40 8.41 Yes 27 2.01 Yes 0 0 No -24 0.71 Yes 31 83.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24217307 + NM_001024939 SLC2A11 1 25.31 4.07 68 -4.9 0 45 6 Yes 32 1.07 Yes 36 0.51 Yes -38 0.44 No 30 75.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 40412738 - NM_052885 SLC2A13 1 1.63 0.22 10 8.44 91.42 50 6.02 Yes 37 1.16 Yes 0 0 No -28 0.5 No 42 49.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 40486736 - NM_052885 SLC2A13 1 3.56 0.25 13 12.12 89.07 24 6.57 Yes 11 1.95 Yes 0 0 No -34 0.47 No 36 65.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 40493892 - NM_052885 SLC2A13 1 1.73 0.13 8 7.29 91.19 36 6.7 Yes 23 0.97 Yes 0 0 No -35 0.52 No 35 43.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 62372679 + NM_020062 SLC2A4RG 1 0.16 0.1 7 -10.7 0 16 4.12 No 68 -3.98 No 28 0.94 Yes -18 0.49 No 52 20.54 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 9101039 - NM_003039 SLC2A5 1 0.47 0.33 17 8.87 89.62 16 5.29 No 75 0.04 No 0 0 No -21 0.56 No 49 55.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 9109757 - NM_003039 SLC2A5 1 0.91 0.76 35 10.4 87.79 38 9.48 Yes 25 1.72 Yes 0 0 No -37 0.44 No 37 69.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 9117630 - NM_003039 SLC2A5 1 0.24 0.25 14 2.3 75.07 17 3.42 No 10 -2.36 No 0 0 No -20 0.57 No 60 30.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 9129391 - NM_003039 SLC2A5 1 0.56 0.43 26 3.12 82.77 20 4.8 No 36 -2.57 No 0 0 No -19 0.82 Yes 51 73.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 136338723 - NM_001145099 SLC2A6 1 437.11 48.51 72 9.7 84.13 25 4.87 No 28 0.19 No 24 0.83 Yes -24 0.7 Yes 46 71.58 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 136338742 - NM_001145099 SLC2A6 1 2.24 0.38 21 -7.29 70.39 22 5.1 No 9 0.17 No 24 0.83 Yes -21 0.92 Yes 49 71.41 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 136340231 - NM_001145099 SLC2A6 1 7.58 4.22 70 -0.02 0 27 5.74 Yes 14 0.88 Yes 0 0 No -26 0.93 Yes 44 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136340619 - NM_001145099 SLC2A6 1 1.22 0.53 26 9.38 84.08 32 5.59 Yes 32 1.08 Yes 32 0.73 Yes -38 0.52 No 39 57.17 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 136340661 - NM_001145099 SLC2A6 1 0.89 0.43 23 2.57 77.01 21 5.64 Yes 8 0.7 No 32 0.73 Yes -20 0.95 Yes 50 94.73 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 136341537 - NM_001145099 SLC2A6 1 2.54 1.35 50 6.23 79.3 40 6.14 Yes 33 0.34 No 25 0.51 Yes -21 0.64 No 45 63.84 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 130165933 + NM_014580 SLC2A8 1 4.4 0.71 33 -3.5 0 19 4.36 No 6 0.14 No 23 0.89 Yes -18 0.92 Yes 52 79.83 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 130166016 + NM_014580 SLC2A8 1 2.36 0.4 25 6.52 79.12 31 5.13 No 0 0.76 No 30 0.78 Yes -30 0.86 Yes 40 73.52 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 130166019 + NM_014580 SLC2A8 1 1.76 0.32 15 4.22 77.93 34 5.3 No 3 0.58 No 0 0 No -33 0.82 Yes 40 70.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130165933 + NM_014580 SLC2A8 1 2.04 0.35 19 -3.5 0 19 4.36 No 6 0.14 No 23 0.89 Yes -18 0.92 Yes 52 79.83 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 130166016 + NM_014580 SLC2A8 1 6.55 1.04 46 6.52 79.12 31 5.13 No 0 0.76 No 30 0.78 Yes -30 0.86 Yes 40 73.52 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 130166019 + NM_014580 SLC2A8 1 3.28 0.44 21 4.22 77.93 34 5.3 No 3 0.58 No 0 0 No -33 0.82 Yes 40 70.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130169714 + NM_014580 SLC2A8 1 4.35 0.88 35 9.93 83.17 18 5.48 No 5 1.56 Yes 26 0.67 Yes -17 0.89 Yes 53 91.11 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 68391048 + NM_022902 SLC30A5 1 1.11 0.76 33 3.97 84.41 28 5.52 No 15 1.48 Yes 0 0 No -27 0.43 No 38 56.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 68399788 + NM_022902 SLC30A5 1 30.78 31.47 72 13.78 91.77 21 5.51 No 20 1.66 Yes 32 0.74 Yes -32 0.38 No 50 49.09 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 68410252 + NM_022902 SLC30A5 1 0.22 0.25 11 -3.03 0 13 3.87 No 33 1.14 Yes 0 0 No -45 0.84 Yes 25 88.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 68410811 + NM_022902 SLC30A5 1 0.12 0.11 7 1.91 61.14 14 5.63 Yes 73 -4.47 No 0 0 No -28 0.72 Yes 42 76.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 68417573 + NM_022902 SLC30A5 1 0.09 0.17 10 4.25 75.37 33 5.89 Yes 72 0.91 Yes 32 0.81 Yes -32 0.33 No 44 60.17 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 68417524 + NM_022902 SLC30A5 1 0.76 1.17 48 1.19 0 36 5.99 Yes 23 0.95 Yes 0 0 No -35 0.84 Yes 35 92.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 68417573 + NM_022902 SLC30A5 1 0.22 0.33 18 4.25 75.37 33 5.89 Yes 72 0.91 Yes 32 0.81 Yes -32 0.33 No 44 60.17 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 68422308 + NM_022902 SLC30A5 1 0.08 0.11 7 8.76 83.47 41 6.75 Yes 28 0.9 Yes 0 0 No -24 0.69 Yes 46 68.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 32402545 + NM_001330479 SLC30A6 1 0.21 0.22 10 6.02 80.12 21 6.16 Yes 8 1.25 Yes 20 0.77 Yes -20 0.87 Yes 50 91.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 32402545 + NM_001330479 SLC30A6 1 0.56 0.64 31 6.02 80.12 21 6.16 Yes 8 1.25 Yes 20 0.77 Yes -20 0.87 Yes 50 91.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 32402545 + NM_001330479 SLC30A6 1 8.62 9.38 72 6.02 80.12 21 6.16 Yes 8 1.25 Yes 20 0.77 Yes -20 0.87 Yes 50 91.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 32402547 + NM_001330479 SLC30A6 1 0.27 0.29 16 0.85 83.69 23 6.32 Yes 10 1.25 Yes 0 0 No -22 0.92 Yes 48 91.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32403814 + NM_001330479 SLC30A6 1 0.2 0.24 14 6.8 91.07 30 6.24 Yes 17 1.13 Yes 0 0 No -30 0.61 No 40 63.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32409342 + NM_001330479 SLC30A6 1 0.17 0.17 9 -12.12 0 31 4.93 No 18 1.32 Yes 0 0 No -30 0.72 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 32412220 + NM_001330479 SLC30A6 1 1.27 1.06 47 9.07 96.25 29 5.91 Yes 16 0.57 No 28 0.77 Yes -28 0.64 No 42 65.67 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 32417991 + NM_001330479 SLC30A6 1 1.42 1.65 54 4.08 0 27 5.02 No 50 0.42 No 0 0 No -31 0.71 Yes 39 75.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32422386 + NM_001330479 SLC30A6 1 0.63 0.44 21 10.03 85.24 30 5.66 Yes 60 0.36 No 29 0.79 Yes -29 0.83 Yes 41 91.51 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 32423034 + NM_001330479 SLC30A6 1 0.25 0.32 18 7.14 84.43 25 4.85 No 24 0.86 Yes 0 0 No -24 0.78 Yes 46 66.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 32429639 + NM_001330479 SLC30A6 1 0.13 0.17 9 4.29 65.5 22 4.07 No 66 1.04 Yes 0 0 No -21 0.53 No 49 56.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32435965 + NM_001330479 SLC30A6 1 0.3 0.28 18 6.2 75.06 27 6.37 Yes 14 1.45 Yes 0 0 No -27 0.75 Yes 43 69.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 32435922 + NM_001330479 SLC30A6 1 0.43 0.42 24 0.4 62.48 64 8.96 Yes 51 1.53 Yes 0 0 No -31 0.92 Yes 39 74.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32435965 + NM_001330479 SLC30A6 1 2.82 2.56 64 6.2 75.06 27 6.37 Yes 14 1.45 Yes 0 0 No -27 0.75 Yes 43 69.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 32447484 + NM_001330479 SLC30A6 1 0.37 0.36 21 8.29 87.7 32 5.74 Yes 46 0.85 Yes 0 0 No -29 0.59 No 39 55.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 101372108 + NM_133496 SLC30A7 1 0.71 1.06 45 10.88 85.21 39 5.86 Yes 61 -1.33 No 0 0 No -32 0.61 No 40 79.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 101372412 + NM_133496 SLC30A7 1 0.27 0.4 21 4.88 0 34 8.14 Yes 14 0.16 No 0 0 No -34 0.57 No 36 72.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 101372449 + NM_133496 SLC30A7 1 0.17 0.25 17 6.26 77.34 33 6.67 Yes 20 0.51 No 0 0 No -25 0.67 Yes 45 64.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 101375925 + NM_133496 SLC30A7 1 0.17 0.18 12 5.96 80.91 27 6.48 Yes 70 0.56 No 0 0 No -26 0.4 No 43 49.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 101416975 + NM_133496 SLC30A7 1 0.28 0.26 16 6.8 86.64 20 5.55 No 7 0.81 Yes 0 0 No -24 0.88 Yes 46 65.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 101437832 + NM_133496 SLC30A7 1 0.39 0.44 19 10.28 87.07 38 6.24 Yes 25 0.87 Yes 37 0.58 Yes -37 0.84 Yes 33 97.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 42000501 + NM_006345 SLC30A9 1 0.08 0.1 7 4.07 83.14 27 5.92 Yes 14 1.41 Yes 0 0 No -30 0.71 Yes 40 76.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42003634 + NM_006345 SLC30A9 1 0.11 0.15 11 -8.34 81.44 27 5.37 No 76 -3.62 No 0 0 No -26 0.55 No 44 57.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42015387 + NM_006345 SLC30A9 1 0.11 0.24 14 9.3 88.28 31 6.4 Yes 18 1.58 Yes 0 0 No -30 0.59 No 40 71.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 42020130 + NM_006345 SLC30A9 1 0.68 1.5 58 1.38 71.83 33 6.48 Yes 15 0.56 No 0 0 No -32 0.76 Yes 38 82.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 42020405 + NM_006345 SLC30A9 1 0.26 0.57 29 3.39 74.48 50 8.94 Yes 37 1 Yes 33 0.79 Yes -49 0.35 No 21 49.37 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 42023791 + NM_006345 SLC30A9 1 0.23 0.47 24 3.29 0 53 8.04 Yes 40 2.3 Yes 0 0 No -52 0.89 Yes 18 94.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 42030156 + NM_006345 SLC30A9 1 0.09 0.18 12 2.15 83.32 25 5.92 Yes 47 -1.45 No 0 0 No -24 0.9 Yes 46 89.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 42061980 + NM_006345 SLC30A9 1 0.99 2.08 66 7.5 84.62 16 7.62 Yes 70 2.4 Yes 0 0 No -34 0.51 No 36 57.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 42068501 + NM_006345 SLC30A9 1 0.37 0.58 33 3.03 81.98 19 4.73 No 55 0.58 No 0 0 No -31 0.46 No 39 59.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 42074850 + NM_006345 SLC30A9 1 0.08 0.14 7 12.22 88.27 65 6.13 Yes 52 2.2 Yes 0 0 No -33 0.57 No 45 75.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 115989557 + NM_001859 SLC31A1 1 1.46 1.13 45 8.82 90.43 42 7.04 Yes 29 0.97 Yes 41 0.35 Yes -41 0.69 Yes 29 76.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 155546181 - NM_001190992 SLC33A1 1 0.47 0.46 23 0.95 0 18 3.53 No 26 0.93 Yes 21 0.82 Yes -45 0.5 No 25 46.33 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 155551481 - NM_001190992 SLC33A1 1 0.78 0.58 31 10.26 83.77 60 7.03 Yes 0 0.35 No 0 0 No -33 0.93 Yes 37 90.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 155562866 - NM_001190992 SLC33A1 1 1.36 0.93 40 8.24 99.37 26 5.26 No 13 0.87 Yes 25 0.89 Yes -25 0.85 Yes 45 92.74 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 88208811 + NM_006416 SLC35A1 1 0.55 0.15 9 8.87 80.37 35 4.85 No 22 0.67 No 0 0 No -30 0.75 Yes 40 91.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88197775 + NM_006416 SLC35A1 1 6.19 2.04 57 9.63 87.76 27 5.62 Yes 59 -1.27 No 0 0 No -30 0.45 No 47 54.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 88208811 + NM_006416 SLC35A1 1 2.17 0.72 33 8.87 80.37 35 4.85 No 22 0.67 No 0 0 No -30 0.75 Yes 40 91.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 88216376 + NM_006416 SLC35A1 1 0.54 0.14 9 6.66 82.42 22 5.1 No 9 0.97 Yes 0 0 No -21 0.75 Yes 49 80.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 88216598 + NM_006416 SLC35A1 1 2.47 0.57 31 10.59 90.44 29 5.31 No 16 1.09 Yes 0 0 No -28 0.63 No 42 69.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 48762760 - NM_001282648 SLC35A2 1 513.34 52.47 72 9.16 82.91 26 4.95 No 13 1.03 Yes 25 0.92 Yes -25 0.93 Yes 45 85.64 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 48763786 - NM_001282648 SLC35A2 1 0.36 0.14 9 -3.48 80.27 33 5.71 Yes 20 1.11 Yes 0 0 No -32 0.75 Yes 38 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100474843 + NM_001271685 SLC35A3 1 0.4 0.21 11 7.7 87.1 26 5.26 No 13 0.63 No 0 0 No -26 0.74 Yes 44 71.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100473110 + NM_001271685 SLC35A3 1 0.44 0.26 14 8.93 87.72 28 8.15 Yes 15 1.42 Yes 0 0 No -27 0.94 Yes 43 90.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 100474843 + NM_001271685 SLC35A3 1 3.5 2.08 62 7.7 87.1 26 5.26 No 13 0.63 No 0 0 No -26 0.74 Yes 44 71.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100474846 + NM_001271685 SLC35A3 1 0.3 0.18 11 6.13 83.23 29 5.42 No 16 0.63 No 0 0 No -29 0.73 Yes 41 70.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100480840 + NM_001271685 SLC35A3 1 0.18 0.13 7 2.76 68.65 18 5.83 Yes 54 0.2 No 23 0.65 Yes -17 0.42 No 53 57.94 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 100490200 + NM_001271685 SLC35A3 1 0.26 0.17 9 3.01 0 32 6.97 Yes 19 0.41 No 0 0 No -27 0.31 No 38 35.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100488012 + NM_001271685 SLC35A3 1 0.24 0.15 9 7.18 82.41 41 6.53 Yes 28 0.96 Yes 0 0 No -40 0.54 No 30 76.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 100490200 + NM_001271685 SLC35A3 1 0.79 0.51 28 3.01 0 32 6.97 Yes 19 0.41 No 0 0 No -27 0.31 No 38 35.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 139945332 + NM_080670 SLC35A4 1 0.22 0.38 20 5.94 82.41 49 5.77 Yes 41 0.62 No 0 0 No -33 0.73 Yes 37 66.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 139945388 + NM_080670 SLC35A4 1 0.15 0.22 12 6.24 79.22 25 6.78 Yes 12 1.92 Yes 0 0 No -24 0.95 Yes 46 94.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 112282317 + NM_017945 SLC35A5 1 0.47 0.22 13 7.6 79.17 38 6.59 Yes 25 0.73 No 0 0 No -23 0.43 No 47 56.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 112296396 + NM_017945 SLC35A5 1 0.88 0.75 33 7.74 83.81 31 5.65 Yes 23 0.54 No 0 0 No -30 0.63 No 40 67.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 112300025 + NM_017945 SLC35A5 1 0.15 0.14 10 7.28 90.67 33 5.79 Yes 64 0.66 No 32 0.69 Yes -30 0.41 No 38 71.4 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 47779285 - NM_001278784 SLC35B1 1 0.1 0.21 11 10.28 86.44 27 7.35 Yes 14 2.06 Yes 26 0.94 Yes -26 0.81 Yes 44 94.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 47780305 - NM_001278784 SLC35B1 1 0.25 0.61 30 -2.29 59.97 55 8.17 Yes 18 2.37 Yes 0 0 No -30 0.72 Yes 16 67.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 47783353 - NM_001278784 SLC35B1 1 0.05 0.13 9 4.84 83.2 16 3.65 No 25 0.28 No 0 0 No -21 0.84 Yes 49 87.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 47783654 - NM_001278784 SLC35B1 1 0.32 0.13 7 -7.94 62.82 21 5.2 No 29 1.02 Yes 0 0 No -28 0.45 No 29 42.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 47783697 - NM_001278784 SLC35B1 1 501.17 172.36 72 9.88 87.74 73 8.71 Yes NA NA NA 32 0.04 Yes -61 0.21 No 12 34.67 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 47784807 - NM_001278784 SLC35B1 1 1.82 2.14 60 8.58 86.98 22 5.29 No 9 0.87 Yes 21 0.89 Yes -21 0.58 No 49 60.51 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 44224144 - NM_001286511 SLC35B2 1 0.14 0.11 8 5.19 67.45 28 5.55 No 52 0.34 No 0 0 No -27 0.91 Yes 43 77.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 44224230 - NM_001286511 SLC35B2 1 2.54 1.81 60 3.3 0 25 6.71 Yes 12 1.12 Yes 0 0 No -24 0.88 Yes 46 89.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 8419119 - NM_001142541 SLC35B3 1 2.7 2.08 59 12.78 94.56 35 4.33 No 54 0.11 No 28 0.75 Yes -21 0.6 No 49 70.21 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 8419878 - NM_001142541 SLC35B3 1 2.13 1.71 56 6.74 72.54 37 6.47 Yes 35 0.67 No 0 0 No -22 0.66 No 48 82.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 8421041 - NM_001142541 SLC35B3 1 0.48 0.35 20 5.43 82.47 13 4.84 No 26 1.03 Yes 0 0 No -25 0.55 No 43 58.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 8425434 - NM_001142541 SLC35B3 1 0.27 0.18 7 9.41 85.55 27 4.94 No 47 1.46 Yes 0 0 No -30 0.53 No 40 51.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 8426957 - NM_001142541 SLC35B3 1 0.92 0.63 33 7.19 78.51 34 4.97 No 64 0.74 No 0 0 No -24 0.76 Yes 36 39.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 8427555 - NM_001142541 SLC35B3 1 1.57 1.14 44 9.85 88.3 24 5.82 Yes 27 0.41 No 0 0 No -28 0.74 Yes 42 72.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 8432508 - NM_001142541 SLC35B3 1 0.96 0.64 27 5.21 82.28 27 6.25 Yes 14 0.69 No 0 0 No -26 0.39 No 37 46.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 133979714 - NM_032826 SLC35B4 1 0.3 0.19 13 9.7 91.53 25 5.37 No 12 1.3 Yes 24 0.91 Yes -24 0.7 Yes 46 83.75 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 45829686 + NM_018389 SLC35C1 1 1.78 0.53 30 11.47 86.36 28 6.9 Yes NA NA NA 0 0 No -28 0.94 Yes 42 85.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 44979526 - NM_001281460 SLC35C2 1 0.07 0.11 7 -3.16 0 36 7.51 Yes 23 0.96 Yes 0 0 No -35 0.71 Yes 35 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44980825 - NM_001281460 SLC35C2 1 1.75 3.08 67 8.3 94.8 21 5.19 No 8 0.12 No 0 0 No -20 0.76 Yes 50 70.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 44983597 - NM_001281460 SLC35C2 1 0.09 0.15 11 -0.45 0 12 4.09 No 21 1.18 Yes 0 0 No -33 0.93 Yes 37 89.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44983818 - NM_001281460 SLC35C2 1 9.95 13.33 72 2.26 71 34 8.49 Yes 21 0.63 No 20 0.17 Yes -33 0.95 Yes 37 95.62 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 44983919 - NM_001281460 SLC35C2 1 2.02 2.63 65 2.75 75.83 40 5.67 Yes 27 0.86 Yes 27 0.72 Yes -20 0.6 No 50 39.65 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 44983979 - NM_001281460 SLC35C2 1 0.23 0.29 18 2.96 93.16 11 4.88 No 73 -4.08 No 0 0 No -26 0.77 Yes 44 62.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 44986022 - NM_001281460 SLC35C2 1 0.15 0.14 10 7.11 74.84 105 11.91 Yes NA NA NA 0 0 No -32 0.39 No 38 43.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 44986342 - NM_001281460 SLC35C2 1 7.91 8.28 71 8.87 86.86 27 8.83 Yes 14 1.33 Yes 26 0.81 Yes -26 0.78 Yes 44 75.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 67474131 - NM_015139 SLC35D1 1 0.58 0.64 34 9.15 80.07 31 6.84 Yes 18 1.61 Yes 30 0.85 Yes -31 0.86 Yes 39 86.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 67477118 - NM_015139 SLC35D1 1 2.35 1.28 42 4.79 73.22 29 6.56 Yes 16 1.35 Yes 0 0 No -28 0.92 Yes 42 93.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 67497788 - NM_015139 SLC35D1 1 4.26 2.38 62 2.41 76.74 36 6.24 Yes 54 0.82 Yes 0 0 No -35 0.5 No 41 60.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 67518566 - NM_015139 SLC35D1 1 0.16 0.13 9 0.59 0 35 6.4 Yes 1 -1.58 No 23 0.64 Yes -32 0.64 No 38 63.6 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 67518974 - NM_015139 SLC35D1 1 0.15 0.14 9 10.03 89.4 15 5.04 No 32 0.54 No 0 0 No -26 0.61 No 44 68.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 99105622 - NR_104627 SLC35D2 1 1.22 0.14 9 8.72 84.1 28 6.39 Yes 70 1.33 Yes 0 0 No -27 0.8 Yes 43 83.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 99118984 - NR_104627 SLC35D2 1 4.6 0.63 15 7.87 87.11 26 6.3 Yes 13 1 Yes 0 0 No -25 0.9 Yes 45 93.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 99119834 - NR_104627 SLC35D2 1 1.77 0.32 19 6.11 82.63 24 6.83 Yes 26 -2.36 No 23 0.74 Yes -23 0.83 Yes 47 83.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 99124251 - NR_104627 SLC35D2 1 1.19 0.36 16 3.64 63.71 29 5.09 No 66 0.33 No 0 0 No -28 0.41 No 41 62.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 99125670 - NR_104627 SLC35D2 1 0.6 0.22 10 7.44 80.14 30 6.63 Yes 17 0.64 No 0 0 No -29 0.97 Yes 41 96.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 16666434 - NM_024881 SLC35E1 1 0.17 0.18 10 9.6 94.86 18 8.02 Yes 5 1.03 Yes 23 0.63 Yes -17 0.78 Yes 53 81.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 16666652 - NM_024881 SLC35E1 1 0.17 0.18 12 7.38 84.33 20 5.28 No 65 1.74 Yes 29 0.71 Yes -29 0.76 Yes 41 54.27 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 16667938 - NM_024881 SLC35E1 1 0.2 0.21 12 7.77 82.48 32 4.88 No 16 0.09 No 0 0 No -31 0.71 Yes 39 60.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 16672576 - NM_024881 SLC35E1 1 0.1 0.1 7 8.21 76.88 44 7.08 Yes 62 -1.61 No 0 0 No -43 0.61 No 27 68.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 16675411 - NM_024881 SLC35E1 1 1.16 1.24 49 6.95 84.96 22 5.64 Yes 56 0.71 No 0 0 No -25 0.63 No 45 75.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 16675944 - NM_024881 SLC35E1 1 1.35 1.4 51 8.69 92.1 60 5.84 Yes 47 0.86 Yes 26 0.63 Yes -26 0.64 No 44 79.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 1661120 - NM_182838 SLC35E2 1 10.61 1.21 47 2 58.48 53 8.72 Yes 69 0.73 No 0 0 No -35 0.57 No 35 77.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 1669238 - NM_182838 SLC35E2 1 2.45 0.13 8 -2.46 0 20 3.19 No 51 1.4 Yes 0 0 No -15 0.5 No 55 38.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1669249 - NM_182838 SLC35E2 1 258.77 9.44 71 5.74 83.45 41 6.48 Yes 40 1.41 Yes 0 0 No -41 0.61 No 29 77.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 1606393 - NM_001290264 SLC35E2B 1 0.49 0.18 11 5.74 83.45 41 6.48 Yes 40 1.41 Yes 0 0 No -41 0.61 No 29 77.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 69141855 + NM_018656 SLC35E3 1 3.48 1.99 54 8.21 75.86 29 6.71 Yes 16 1.08 Yes 0 0 No -28 0.83 Yes 42 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69141858 + NM_018656 SLC35E3 1 1.94 0.97 46 6.47 87.03 32 6.93 Yes 19 1.08 Yes 0 0 No -31 0.83 Yes 39 80.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69146042 + NM_018656 SLC35E3 1 0.23 0.15 10 5.22 67.57 29 5.63 Yes 16 1.44 Yes 0 0 No -31 0.36 No 41 37.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 69152347 + NM_018656 SLC35E3 1 0.36 0.22 13 8.44 85.29 32 5.38 No 13 0.67 No 0 0 No -25 0.44 No 45 49.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 69153819 + NM_018656 SLC35E3 1 9.19 5.67 71 2.39 69.85 44 8.18 Yes 2 0.27 No 35 0.19 Yes -43 0.63 No 27 94.06 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 107663520 - NM_017515 SLC35F2 1 0.17 0.17 10 4.36 0 10 4 No 17 1.16 Yes 22 0.83 Yes -29 0.92 Yes 41 96.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 107673836 - NM_017515 SLC35F2 1 0.09 0.13 7 8.11 89.27 51 7.42 Yes 64 1.18 Yes 0 0 No -30 0.59 No 40 69.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 107682517 - NM_017515 SLC35F2 1 0.67 0.64 31 -1.08 0 26 6.35 Yes 13 2.25 Yes 0 0 No -25 0.78 Yes 45 88.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 107704969 - NM_017515 SLC35F2 1 0.16 0.13 9 4.21 73.43 63 10.81 Yes 50 2.29 Yes 0 0 No -33 0.51 No 37 51.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 107711477 - NM_017515 SLC35F2 1 0.46 0.25 15 5.26 92.83 13 5.1 No 58 -2.13 No 24 0.14 Yes -22 0.25 No 51 19.94 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 107722775 - NM_017515 SLC35F2 1 0.25 0.21 13 9.69 86.5 24 6.75 Yes 11 0.21 No 0 0 No -23 0.86 Yes 47 66.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 114475426 - NM_001330314 SLC35F5 1 0.35 0.22 15 -8.94 80.72 27 5.72 Yes 26 1.49 Yes 25 0.8 Yes -26 0.57 No 43 58.84 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 114483076 - NM_001330314 SLC35F5 1 0.45 0.28 16 6.86 81.84 22 6.22 Yes 54 1.32 Yes 29 0.8 Yes -21 0.67 Yes 49 75.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 114487734 - NM_001330314 SLC35F5 1 0.75 0.21 13 6.39 86.45 26 5.09 No 0 0 No 0 0 No -25 0.67 Yes 45 57.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 114490981 - NM_001330314 SLC35F5 1 1.86 0.93 40 0.65 75.7 35 8.39 Yes 15 0.94 Yes 34 0.8 Yes -34 0.62 No 36 88.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 114497610 - NM_001330314 SLC35F5 1 0.59 0.33 18 6.1 85.97 19 5.56 No 54 0.72 No 0 0 No -28 0.6 No 45 62.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 114508053 - NM_001330314 SLC35F5 1 0.14 0.13 9 0.46 74.84 49 6.27 Yes 48 0.05 No 0 0 No -26 0.52 No 31 60.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 150831903 + NM_078483 SLC36A1 1 3.12 0.58 23 9.18 78.69 32 5.83 Yes -2 0.84 Yes 29 0.34 Yes -32 0.82 Yes 41 70.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 150848806 + NM_078483 SLC36A1 1 1.04 0.24 14 10.43 81.27 21 6.71 Yes 8 0.37 No 25 0.64 Yes -25 0.73 Yes 45 78.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 150856415 + NM_078483 SLC36A1 1 2.29 0.49 25 4.77 75.68 40 6.48 Yes 6 0.89 Yes 18 0.59 Yes -39 0.6 No 31 62.28 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 150860693 + NM_078483 SLC36A1 1 0.74 0.14 10 6.46 75.21 27 4.61 No 1 0.82 Yes 0 0 No -22 0.8 Yes 48 79.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 92887367 - NM_001286139 SLC36A4 1 3.44 0.54 32 5.6 83.21 24 4.44 No 49 0.21 No 0 0 No -23 0.85 Yes 47 82.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 92887370 - NM_001286139 SLC36A4 1 1.98 0.26 15 4.22 84.43 21 4.17 No 46 0.22 No 0 0 No -20 0.82 Yes 50 67.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 92887383 - NM_001286139 SLC36A4 1 1.37 0.21 13 4.51 76.95 46 7.42 Yes 73 0.33 No 0 0 No -35 0.58 No 35 65.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 92903388 - NM_001286139 SLC36A4 1 8.26 1.49 50 8.34 80.56 36 4.58 No 1 0.81 Yes 26 0.64 Yes -30 0.54 No 44 54.48 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 92903388 - NM_001286139 SLC36A4 1 0.91 0.15 9 8.34 80.56 36 4.58 No 1 0.81 Yes 26 0.64 Yes -30 0.54 No 44 54.48 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 92911719 - NM_001286139 SLC36A4 1 0.7 0.11 7 4.65 75.18 23 6 Yes 10 1.33 Yes 0 0 No -23 0.69 Yes 47 70.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 43942793 + NM_018964 SLC37A1 1 0.31 0.15 11 7.54 89.94 23 4.9 No 24 0.76 No 0 0 No -26 0.31 No 44 42.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 43946271 + NM_018964 SLC37A1 1 0.81 0.49 23 3.9 68.96 47 7.44 Yes 12 1.4 Yes 0 0 No -24 0.58 No 31 55.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 43954466 + NM_018964 SLC37A1 1 2.51 1.5 56 9.83 86.78 38 6.24 Yes 65 1.42 Yes 0 0 No -22 0.43 No 38 48.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 43968759 + NM_018964 SLC37A1 1 0.57 0.39 21 8.42 86.76 20 5.22 No 24 1.03 Yes 0 0 No -23 0.57 No 47 70.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 43978835 + NM_018964 SLC37A1 1 0.29 0.17 8 6.41 85.07 28 4.26 No 45 1.01 Yes 0 0 No -27 0.58 No 43 55.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 43995876 + NM_018964 SLC37A1 1 1.82 0.85 36 8.41 94.22 28 4.27 No 24 0.38 No 27 0.66 Yes -27 0.71 Yes 43 68.95 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr21 43999580 + NM_018964 SLC37A1 1 0.8 0.36 18 3.74 72.9 22 5.29 No 48 -3.46 No 0 0 No -21 0.75 Yes 49 82.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 140035240 - NM_207113 SLC37A3 1 2.81 0.35 18 6.82 78.05 33 5.7 Yes 73 0.47 No 26 0.83 Yes -32 0.83 Yes 44 70.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 140051770 - NM_207113 SLC37A3 1 9.36 1.13 49 8.61 88.29 32 5.65 Yes 38 -2.07 No 31 0.56 Yes -31 0.51 No 45 55.38 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 140051982 - NM_207113 SLC37A3 1 7.82 0.79 38 6.79 76.51 30 7.71 Yes -1 0.24 No 29 0.61 Yes -29 0.69 Yes 41 87.1 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 140060137 - NM_207113 SLC37A3 1 3.79 0.32 21 6.93 86.73 27 6.27 Yes 14 1.26 Yes 0 0 No -26 0.62 No 44 70.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 140075455 - NM_207113 SLC37A3 1 3.68 0.4 21 7 79.26 29 5.82 Yes 0 0.69 No 0 0 No -28 0.68 Yes 42 72.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 140079689 - NM_207113 SLC37A3 1 8.46 1.1 45 9.73 93.81 32 5.45 No 12 0.27 No 0 0 No -24 0.47 No 43 70.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 118895810 - NM_001164279 SLC37A4 1 0.64 0.21 13 -0.35 66.52 17 4.76 No 49 1.94 Yes 25 0.89 Yes -20 0.4 No 55 29.48 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 118896468 - NM_001164279 SLC37A4 1 1.37 0.36 22 11.83 84.32 79 9.48 Yes 66 1.11 Yes 41 0.06 Yes -41 0.54 No 29 82.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 118898481 - NM_001164279 SLC37A4 1 1.43 0.39 21 4.4 81.95 16 6.55 Yes 46 -1.61 No 28 0.6 Yes -24 0.6 No 46 68.26 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 118901446 - NM_001164279 SLC37A4 1 1.32 0.1 7 3.94 0 21 4.58 No 66 -2.16 No 20 0.69 Yes -20 0.73 Yes 50 79.89 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 46582811 - NM_001278389 SLC38A1 1 0.07 0.21 13 5.06 84.37 47 7.28 Yes 56 1.67 Yes 0 0 No -40 0.64 No 24 79.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 46582913 - NM_001278389 SLC38A1 1 0.32 0.97 42 11.37 98.16 16 5.17 No 64 -2.82 No 0 0 No -23 0.44 No 47 49.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46590042 - NM_001278389 SLC38A1 1 0.33 0.94 42 9.33 89.27 21 5.2 No 36 0.71 No 0 0 No -20 0.68 Yes 50 93.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 46590060 - NM_001278389 SLC38A1 1 0.06 0.21 14 9.34 76.39 31 4.37 No 18 0.34 No 30 0.72 Yes -30 0.78 Yes 40 76.62 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 46590655 - NM_001278389 SLC38A1 1 0.55 1.63 55 8.01 95.95 38 6.45 Yes 63 -3.22 No 0 0 No -20 0.54 No 50 51.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46590721 - NM_001278389 SLC38A1 1 0.35 1.06 44 9.22 87.27 26 4.83 No 73 1.31 Yes 0 0 No -26 0.66 No 44 87.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 46590946 - NM_001278389 SLC38A1 1 0.04 0.13 9 7.45 91.2 20 5.1 No 7 1 Yes 0 0 No -19 0.63 No 51 86.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 46590963 - NM_001278389 SLC38A1 1 0.05 0.13 7 6.46 83.37 46 6.66 Yes 33 0.15 No 0 0 No -18 0.61 No 52 68.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46591107 - NM_001278389 SLC38A1 1 0.18 0.53 29 7.12 85.02 41 8.49 Yes 28 1.9 Yes 0 0 No -40 0.95 Yes 30 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 46598161 - NM_001278389 SLC38A1 1 0.05 0.22 12 5.79 82.73 34 5.68 Yes 65 0.46 No 0 0 No -33 0.87 Yes 37 97.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 46598200 - NM_001278389 SLC38A1 1 0.03 0.13 9 -6.68 0 39 6.61 Yes 26 0.47 No 0 0 No -38 0.62 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46604532 - NM_001278389 SLC38A1 1 0.04 0.19 10 10.43 86.33 22 6.03 Yes 68 -4.52 No 0 0 No -24 0.52 No 48 37.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46614577 - NM_001278389 SLC38A1 1 0.04 0.24 14 7.81 79.49 22 5.99 Yes 9 0.98 Yes 0 0 No -29 0.65 No 49 57.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 46623050 - NM_001278389 SLC38A1 1 0.04 0.22 11 -15.01 0 30 4.46 No 42 0.48 No 0 0 No -29 0.89 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 46623419 - NM_001278389 SLC38A1 1 0.04 0.17 10 -3.63 0 29 5.78 Yes 8 0.13 No 0 0 No -28 0.65 No 42 56.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46634289 - NM_001278389 SLC38A1 1 0.21 0.88 38 4.04 77.43 25 7.24 Yes 8 1 Yes 0 0 No -24 0.73 Yes 46 66.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 46635701 - NM_001278389 SLC38A1 1 0.64 2.51 57 7.26 81.5 49 7.07 Yes 36 0.71 No 0 0 No -48 0.77 Yes 22 88.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79219970 - NM_001037984 SLC38A10 1 0.52 0.38 21 2.51 80.34 26 5.15 No 13 -0.97 No 0 0 No -25 0.88 Yes 45 44.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 79220045 - NM_001037984 SLC38A10 1 0.32 0.24 13 0.79 64.78 17 4.99 No 12 -2.45 No 28 0.72 Yes -21 0.75 Yes 39 41.69 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 79220859 - NM_001037984 SLC38A10 1 2.06 1.18 45 -1.27 59.76 26 6.86 Yes 13 2 Yes 22 0.93 Yes -25 0.9 Yes 45 87.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 79223894 - NM_001037984 SLC38A10 1 3 1.53 55 -3.91 54.13 52 8.05 Yes 39 0.89 Yes 41 0.29 Yes -51 0.76 Yes 19 91.08 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 79225171 - NM_001037984 SLC38A10 1 0.27 0.15 10 9.98 89.1 22 5.29 No 27 -0.92 No 0 0 No -21 0.65 No 49 79.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 79226711 - NM_001037984 SLC38A10 1 0.16 0.22 15 11.04 85.83 40 6.78 Yes 27 1.32 Yes 0 0 No -39 0.75 Yes 31 88.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79227036 - NM_001037984 SLC38A10 1 0.49 0.74 35 2.36 0 24 6.24 Yes 11 1.97 Yes 0 0 No -23 0.92 Yes 47 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79227036 - NM_001037984 SLC38A10 1 0.08 0.13 7 2.36 0 24 6.24 Yes 11 1.97 Yes 0 0 No -23 0.92 Yes 47 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 79233608 - NM_001037984 SLC38A10 1 0.16 0.25 14 7.72 91.45 21 4.65 No 31 0.36 No 0 0 No -25 0.77 Yes 45 89.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79235839 - NM_001037984 SLC38A10 1 0.18 0.33 18 6.72 84.17 24 4.28 No -3 0.26 No 0 0 No -24 0.59 No 46 71.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 79244523 - NM_001037984 SLC38A10 1 1.46 2.25 64 5.16 92.6 29 5.66 Yes 16 0.1 No 0 0 No -28 0.91 Yes 42 96.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79244526 - NM_001037984 SLC38A10 1 0.08 0.13 7 2.91 79.31 26 5.39 No 13 0.11 No 0 0 No -25 0.94 Yes 45 96.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79246723 - NM_001037984 SLC38A10 1 0.07 0.13 7 1.61 72.59 29 6.95 Yes 16 -2.36 No 0 0 No -29 0.9 Yes 41 84.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79250930 - NM_001037984 SLC38A10 1 0.5 0.88 44 2.52 0 26 6.17 Yes 13 0.09 No 0 0 No -25 0.51 No 45 47.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 79253961 - NM_001037984 SLC38A10 1 0.93 1.68 56 7.34 84.58 26 5.66 Yes 55 -2.81 No 25 0.76 Yes -25 0.38 No 45 86.08 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 79262746 - NM_001037984 SLC38A10 1 2.15 1.97 59 9.27 86.02 30 6.35 Yes 17 0.75 No 29 0.89 Yes -29 0.8 Yes 41 94.62 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 46760024 - NM_001307936 SLC38A2 1 0.45 0.76 35 5.8 81.87 17 5.49 No 45 0.11 No 0 0 No -26 0.52 No 44 52.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 46764411 - NM_001307936 SLC38A2 1 1896.19 284.86 72 7.89 77.89 21 5.99 Yes 58 0.97 Yes 32 0.6 Yes -30 0.47 No 32 50.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 48317151 - NM_033518 SLC38A5 1 10.87 17.39 72 11.24 87.92 18 5.83 Yes 40 -2.05 No 0 0 No -27 0.9 Yes 43 68.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 48317682 - NM_033518 SLC38A5 1 0.07 0.11 7 -7.54 0 13 4.31 No 22 -1.46 No 0 0 No -16 0.59 No 50 44.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 48319147 - NM_033518 SLC38A5 1 0.4 0.75 34 -0.12 0 111 11.29 Yes 1 0.09 No 0 0 No -32 0.71 Yes 38 73.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48319147 - NM_033518 SLC38A5 1 0.09 0.24 13 -0.12 0 111 11.29 Yes 1 0.09 No 0 0 No -32 0.71 Yes 38 73.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48319280 - NM_033518 SLC38A5 1 0.05 0.11 8 1.89 66.24 34 6.32 Yes 21 1.36 Yes 28 0.28 Yes -33 0.89 Yes 37 80.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 48320494 - NM_033518 SLC38A5 1 0.13 0.31 16 5.28 75.86 18 5.33 No 55 1.7 Yes 0 0 No -28 0.72 Yes 42 74.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48320994 - NM_033518 SLC38A5 1 0.1 0.22 15 2.54 83 29 7.75 Yes 16 1.14 Yes 0 0 No -28 0.79 Yes 38 71.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48326167 - NM_033518 SLC38A5 1 0.05 0.11 7 2.21 0 13 3.87 No 23 0.49 No 0 0 No -35 0.97 Yes 35 96.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 61453769 + NM_153811 SLC38A6 1 11.72 0.79 33 8.42 82.98 47 7.44 Yes 54 0.77 Yes 41 0.18 Yes -41 0.64 No 29 71.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 61465037 + NM_153811 SLC38A6 1 7.71 0.64 29 4.5 77.08 67 9.38 Yes 54 0.18 No 0 0 No -20 0.45 No 50 50.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 61468746 + NM_153811 SLC38A6 1 2.07 0.14 8 12.15 88.36 52 7.23 Yes 39 0.96 Yes 30 0.54 Yes -27 0.41 No 43 43.46 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 61518797 + NM_153811 SLC38A6 1 1.74 0.14 7 7.25 96.49 17 5.58 Yes 69 0.85 Yes 0 0 No -26 0.77 Yes 44 64.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 58709247 - NM_018231 SLC38A7 1 0.97 0.17 12 9.97 86.44 25 6 Yes 12 1.42 Yes 24 0.93 Yes -24 0.88 Yes 46 93.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 58709927 - NM_018231 SLC38A7 1 2.35 0.36 21 7.09 80.03 24 5.2 No 42 1.15 Yes 23 0.93 Yes -23 0.86 Yes 50 80 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 58709927 - NM_018231 SLC38A7 1 0.73 0.11 7 7.09 80.03 24 5.2 No 42 1.15 Yes 23 0.93 Yes -23 0.86 Yes 50 80 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 58710026 - NM_018231 SLC38A7 1 0.88 0.14 8 6.79 84.32 39 6.71 Yes 26 0.27 No 38 0.46 Yes -38 0.55 No 32 68.36 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 58717988 - NM_018231 SLC38A7 1 4.23 0.42 21 7.76 81.48 22 5.51 No 51 1.11 Yes 27 0.65 Yes -27 0.71 Yes 43 71.86 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 54922502 - NM_001282429 SLC38A9 1 0.51 0.22 15 -0.48 63.5 18 5.38 No -2 0.75 No 24 0.78 Yes -23 0.69 Yes 60 51.05 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 54929662 - NM_001282429 SLC38A9 1 0.63 0.31 19 6.4 87.11 28 5.29 No 29 1.54 Yes 19 0.59 Yes -27 0.89 Yes 43 77.73 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 54929681 - NM_001282429 SLC38A9 1 1.13 0.54 31 6.24 80.5 23 5.74 Yes 10 1.54 Yes 0 0 No -22 0.83 Yes 48 89.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 54959954 - NM_001282429 SLC38A9 1 0.33 0.15 10 4.9 0 30 6.69 Yes 17 0.75 No 0 0 No -33 0.5 No 37 58.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 54959958 - NM_001282429 SLC38A9 1 0.41 0.18 12 2.42 83 26 6.43 Yes 13 0.77 Yes 0 0 No -29 0.52 No 41 63.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 54998723 - NM_001282429 SLC38A9 1 1.63 0.22 13 6.53 83.59 22 5.42 No 9 0.94 Yes 22 0.7 Yes -22 0.4 No 48 52.16 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 55000263 - NM_001282429 SLC38A9 1 75.93 12.76 72 7.91 85.71 35 5.84 Yes 22 1.18 Yes 30 0.77 Yes -30 0.8 Yes 40 78.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 55000263 - NM_001282429 SLC38A9 1 1.1 0.14 7 7.91 85.71 35 5.84 Yes 22 1.18 Yes 30 0.77 Yes -30 0.8 Yes 40 78.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 196549170 + NM_001127257 SLC39A10 1 0.89 0.21 13 7.51 80.74 31 5.95 Yes 59 0.4 No 0 0 No -28 0.31 No 42 46.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 196578838 + NM_001127257 SLC39A10 1 0.95 0.32 19 7.23 82.77 23 7.35 Yes 10 1.38 Yes 0 0 No -22 0.91 Yes 48 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 196589105 + NM_001127257 SLC39A10 1 2.52 0.74 32 7.28 81.12 26 5.25 No 13 0.11 No 0 0 No -25 0.7 Yes 49 79.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 70670712 - NM_001159770 SLC39A11 1 0.68 0.19 11 8.26 94.67 35 5.79 Yes 22 0.09 No 0 0 No -24 0.59 No 36 61.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 70691206 - NM_001159770 SLC39A11 1 1.5 0.47 20 3.73 76.65 35 8.6 Yes 22 2.4 Yes 0 0 No -34 0.88 Yes 36 93.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 70692216 - NM_001159770 SLC39A11 1 0.36 0.1 7 13.56 89.66 51 6.83 Yes 13 0.49 No 0 0 No -24 0.49 No 45 62.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 70709121 - NM_001159770 SLC39A11 1 4.64 1.28 49 9.3 87.57 28 7.26 Yes 15 2.13 Yes 0 0 No -27 0.86 Yes 43 85.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 70721976 - NM_001159770 SLC39A11 1 11.77 3.07 61 6.23 98.03 18 7.34 Yes 5 0.67 No 0 0 No -28 0.56 No 40 63.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 70725143 - NM_001159770 SLC39A11 1 3.24 0.86 33 5.61 80.41 33 6.06 Yes 59 -2.35 No 0 0 No -32 0.84 Yes 38 94.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 70725146 - NM_001159770 SLC39A11 1 1.96 0.47 26 8.48 71.87 30 5.81 Yes 56 -2.35 No 0 0 No -29 0.86 Yes 41 94.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 70735042 - NM_001159770 SLC39A11 1 0.5 0.19 11 12.03 92.52 27 5.74 Yes 14 0.38 No 0 0 No -26 0.69 Yes 44 78.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 70812526 - NM_001159770 SLC39A11 1 0.89 0.33 18 10.29 96.25 23 5.95 Yes 61 0.3 No 0 0 No -33 0.39 No 48 73.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 70814078 - NM_001159770 SLC39A11 1 0.31 0.11 7 2.06 65.26 53 5.89 Yes 51 0.85 Yes 0 0 No -53 0.69 Yes 17 65.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 70814544 - NM_001159770 SLC39A11 1 1.21 0.42 23 7.65 93.11 18 4.43 No 38 1.12 Yes 0 0 No -21 0.44 No 49 40.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 70818162 - NM_001159770 SLC39A11 1 0.39 0.17 10 9.89 86.53 20 5.16 No 67 -0.46 No 29 0.63 Yes -29 0.54 No 46 59.17 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 70820023 - NM_001159770 SLC39A11 1 6.18 1.99 59 10.43 95.48 30 5.87 Yes 49 1.32 Yes 29 0.65 Yes -29 0.71 Yes 41 57.84 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 70827590 - NM_001159770 SLC39A11 1 1.3 0.4 24 8.67 89.47 28 5.39 No 15 0.77 No 0 0 No -22 0.58 No 43 59.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 70834260 - NM_001159770 SLC39A11 1 1.39 0.5 30 8.42 93.23 29 5.34 No 28 0.78 Yes 28 0.56 Yes -28 0.73 Yes 42 74.25 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 70838034 - NM_001159770 SLC39A11 1 1.19 0.43 25 8.31 86.16 30 6.4 Yes 17 1.38 Yes 0 0 No -29 0.88 Yes 41 95.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 71058432 - NM_001159770 SLC39A11 1 0.88 0.44 25 8.63 87.82 33 6.99 Yes 20 0.12 No 0 0 No -27 0.74 Yes 43 70.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 71069975 - NM_001159770 SLC39A11 1 2.79 1.44 55 8.4 91.03 28 3.84 No 9 0.95 Yes 21 0.74 Yes -21 0.63 No 43 64.48 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 71078051 - NM_001159770 SLC39A11 1 0.32 0.17 10 0.15 0 20 5.21 No 57 2.32 Yes 0 0 No -27 0.77 Yes 43 73.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 71078056 - NM_001159770 SLC39A11 1 1.41 0.75 36 3.7 74.09 15 4.86 No 52 2.32 Yes 0 0 No -22 0.76 Yes 48 82.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 71088256 - NM_001159770 SLC39A11 1 3.62 1.13 42 5.47 81.09 29 5.66 Yes 0 0.62 No 28 0.92 Yes -28 0.83 Yes 42 90.5 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 47435835 + NM_001330245 SLC39A13 1 1 0.25 12 5.26 78.84 26 5.2 No 49 0.69 No 36 0.18 Yes -25 0.45 No 45 66.68 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 47435853 + NM_001330245 SLC39A13 1 1.02 0.32 18 3.9 83.97 17 5.19 No 67 0.69 No 0 0 No -16 0.67 Yes 54 90.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 22267458 + NM_001135153 SLC39A14 1 0.57 0.35 17 11.24 86.6 35 6.08 Yes 22 0.85 Yes 34 0.51 Yes -34 0.71 Yes 36 83.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 22277037 + NM_001135153 SLC39A14 1 0.09 0.13 7 -9.95 0 16 4.24 No 45 1.15 Yes 29 0.76 Yes -57 0.35 No 13 36.8 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 2737299 - NM_213568 SLC39A3 1 2.08 1.15 45 8.29 77.02 30 6.32 Yes 71 -4.66 No 28 0.4 Yes -30 0.5 No 40 82.76 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 2737751 - NM_213568 SLC39A3 1 0.59 0.31 18 6.81 84.61 19 5.45 No 40 -4.65 No 0 0 No -26 0.59 No 52 82.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 2737775 - NM_213568 SLC39A3 1 1.16 0.68 28 4.21 74.69 25 4.63 No 76 -4.02 No 24 0.76 Yes -24 0.71 Yes 46 70.81 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 145638286 - NM_130849 SLC39A4 1 0.41 0.11 7 -0.32 61.83 26 5.58 Yes 51 0.73 No 0 0 No -24 0.9 Yes 46 54.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 33708691 - NM_012319 SLC39A6 1 1.38 0.99 39 9.99 90.72 35 6.4 Yes 22 1.35 Yes 0 0 No -34 0.68 Yes 36 88.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 103184344 - NM_001135147 SLC39A8 1 0.12 0.14 8 1.88 0 10 4 No 55 1.14 Yes 0 0 No -27 0.91 Yes 43 91.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 103188072 - NM_001135147 SLC39A8 1 0.22 0.24 11 4.13 74.66 76 6.47 Yes 38 0.5 No 0 0 No -50 0.68 Yes 20 76.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103190952 - NM_001135147 SLC39A8 1 0.22 0.47 22 1.27 64.53 19 3.85 No 12 0.44 No 18 0.65 Yes -18 0.53 No 52 84.26 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr4 103227159 - NM_001135147 SLC39A8 1 2.04 2.74 54 6.32 79.25 29 5.57 Yes 64 0.38 No 0 0 No -28 0.95 Yes 42 93.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103236897 - NM_001135147 SLC39A8 1 0.3 0.25 15 5.17 78.04 35 6.16 Yes 66 0.69 No 0 0 No -34 0.66 Yes 36 63.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 103236900 - NM_001135147 SLC39A8 1 0.82 0.67 33 5.95 82.36 32 5.92 Yes 63 0.69 No 0 0 No -31 0.76 Yes 39 67.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 103245721 - NM_001135147 SLC39A8 1 0.18 0.14 9 9.24 86.21 31 3.79 No 2 1.37 Yes 0 0 No -25 0.32 No 41 35.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 103246156 - NM_001135147 SLC39A8 1 1 0.78 37 4.71 95.49 21 4.8 No 12 0.25 No 0 0 No -20 0.74 Yes 46 69.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69892566 + NM_018375 SLC39A9 1 0.13 0.18 10 8.71 87.82 22 5.78 Yes 9 1.8 Yes 0 0 No -21 0.52 No 45 61.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69895278 + NM_018375 SLC39A9 1 0.89 1.25 50 4.8 78.08 22 4.97 No 9 0.97 Yes 27 0.75 Yes -27 0.42 No 31 56.99 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 69908548 + NM_018375 SLC39A9 1 4.47 6.44 72 7.54 89.49 39 8.4 Yes 7 0.85 Yes 25 0.53 Yes -25 0.74 Yes 45 87.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 69928413 + NM_018375 SLC39A9 1 0.74 1.06 41 9.26 87.36 33 4.55 No 20 1.22 Yes 26 0.92 Yes -26 0.83 Yes 44 71.82 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 62649976 + NR_037193 SLC3A2 1 0.06 0.17 12 3.92 84.41 38 6.47 Yes 25 0.55 No 22 0.5 Yes -22 0.61 No 48 56.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 62650001 + NR_037193 SLC3A2 1 0.04 0.14 8 6.23 90.14 16 4.25 No 3 1.53 Yes 27 0.78 Yes -15 0.33 No 23 43.9 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 62650138 + NR_037193 SLC3A2 1 0.3 0.93 39 5.26 85.86 17 5.29 No 4 0.24 No 25 0.59 Yes -21 0.36 No 45 52.96 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 62653908 + NR_037193 SLC3A2 1 0.11 0.24 14 7.87 84.5 55 8.31 Yes 42 1.9 Yes 27 0.04 Yes -54 0.43 No 23 57.12 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 62653932 + NR_037193 SLC3A2 1 0.11 0.22 12 3.37 84.39 27 5.22 No 66 1.89 Yes 26 0.89 Yes -26 0.68 Yes 44 66.27 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 62655572 + NR_037193 SLC3A2 1 0.13 0.26 15 4.57 78.67 22 5.23 No 59 0.55 No 26 0.77 Yes -21 0.73 Yes 49 68.37 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 62655584 + NR_037193 SLC3A2 1 0.12 0.29 18 -1.42 0 20 4.58 No 7 1.75 Yes 26 0.77 Yes -19 0.9 Yes 51 81.92 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 105218729 - NM_032148 SLC41A2 1 0.9 0.32 21 6.75 89.23 9 4.8 No -4 0.46 No 0 0 No -22 0.31 No 52 28.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105227960 - NM_032148 SLC41A2 1 7.09 2.4 63 5.7 75.11 28 6.32 Yes 15 1.06 Yes 29 0.66 Yes -27 0.78 Yes 43 80.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 105253674 - NM_032148 SLC41A2 1 0.47 0.14 10 7.11 97.96 19 7.65 Yes 34 0.51 No 0 0 No -30 0.73 Yes 40 69.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105257212 - NM_032148 SLC41A2 1 0.35 0.26 15 11.03 88.27 26 7.2 Yes 36 -2.24 No 0 0 No -31 0.39 No 45 47.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105259464 - NM_032148 SLC41A2 1 0.33 0.22 15 3.51 63.3 37 6.46 Yes 76 -1.94 No 0 0 No -36 0.78 Yes 34 83.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105282849 - NM_032148 SLC41A2 1 0.32 0.13 8 5.89 78.81 26 6.49 Yes 13 0.91 Yes 0 0 No -25 0.71 Yes 48 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 105308867 - NM_032148 SLC41A2 1 1.2 0.51 25 8.8 81.54 21 5.17 No 34 0.29 No 0 0 No -34 0.45 No 50 48.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 125735715 - NM_001008487 SLC41A3 1 0.32 0.13 9 2.35 0 34 6.32 Yes 69 -0.56 No 0 0 No -36 0.76 Yes 34 79.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125743749 - NM_001008487 SLC41A3 1 0.56 0.25 16 7.36 78.07 37 8.74 Yes 46 1.66 Yes 24 0.65 Yes -36 0.89 Yes 34 95.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 57261073 - NM_001198810 SLC43A1 1 0.4 0.11 8 6.29 83.84 36 7.28 Yes 64 -2.68 No 0 0 No -35 0.51 No 35 85.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 57263746 - NM_001198810 SLC43A1 1 0.62 0.13 9 -1.39 58.94 49 7.5 Yes 36 1.69 Yes 0 0 No -48 0.52 No 22 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 57268848 - NM_001198810 SLC43A1 1 14.18 1.38 51 8.11 82.07 29 6.71 Yes 16 1.57 Yes 28 0.89 Yes -28 0.94 Yes 42 93.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 1479942 - NM_152346 SLC43A2 1 0.38 0.42 21 8.24 82.99 28 5.57 Yes 15 1.09 Yes 0 0 No -27 0.92 Yes 43 94.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1484914 - NM_152346 SLC43A2 1 0.19 0.15 9 7.81 92.64 21 5.2 No 28 -2.02 No 0 0 No -21 0.56 No 49 52.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 1515856 - NM_152346 SLC43A2 1 0.29 0.36 21 10.89 87.71 28 7.05 Yes 68 0.66 No 0 0 No -27 0.72 Yes 43 79.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1519761 - NM_152346 SLC43A2 1 0.35 0.26 14 4.98 76.36 34 5.92 Yes 66 -5.23 No 0 0 No -33 0.29 No 37 70.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 1520087 - NM_152346 SLC43A2 1 0.69 0.26 16 -0.92 0 36 6.55 Yes 43 1.01 Yes 25 0.77 Yes -35 0.8 Yes 35 91.22 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 57176771 - NM_017611 SLC43A3 1 0.03 0.11 8 -10.13 0 31 6.47 Yes 18 1.22 Yes 0 0 No -30 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 57177625 - NM_017611 SLC43A3 1 0.06 0.31 15 5.49 76.66 24 8.54 Yes 11 2.04 Yes 32 0.25 Yes -23 0.81 Yes 47 91.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 57182170 - NM_017611 SLC43A3 1 0.07 0.31 18 6.72 82.01 34 5.93 Yes 52 0.89 Yes 0 0 No -24 0.59 No 46 58.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 57182201 - NM_017611 SLC43A3 1 0.05 0.19 11 1.26 0 34 6.88 Yes 21 0.89 Yes 0 0 No -30 0.55 No 37 82.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 57182578 - NM_017611 SLC43A3 1 0.04 0.15 11 1.72 74.78 30 5.48 No 63 1.02 Yes 0 0 No -29 0.96 Yes 41 96.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 57182599 - NM_017611 SLC43A3 1 0.23 0.79 42 3.74 77.53 55 7.69 Yes 42 1.02 Yes 0 0 No -32 0.56 No 38 75.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 57182866 - NM_017611 SLC43A3 1 0.04 0.13 8 -10.68 0 12 4.24 No 40 2.33 Yes 0 0 No -52 0.84 Yes 18 93.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 57182871 - NM_017611 SLC43A3 1 0.92 3.15 67 -1.63 0 48 8.23 Yes 35 2.36 Yes 19 0.45 Yes -47 0.87 Yes 23 92.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 57184180 - NM_017611 SLC43A3 1 0.03 0.13 8 5.08 76.19 22 4.62 No 32 0.83 Yes 0 0 No -44 0.61 No 26 71.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 57184205 - NM_017611 SLC43A3 1 0.06 0.28 16 6.1 85.8 20 6.93 Yes 7 0.86 Yes 0 0 No -19 0.93 Yes 51 94.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 57186356 - NM_017611 SLC43A3 1 0.18 0.64 33 3.01 0 24 9.56 Yes 60 1.74 Yes 0 0 No -32 0.71 Yes 38 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 57188553 - NM_017611 SLC43A3 1 0.19 0.9 41 -4.05 0 20 4.36 No 30 0.12 No 0 0 No -42 0.7 Yes 59 70.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 57188566 - NM_017611 SLC43A3 1 0.03 0.13 7 -2.4 49.01 30 5.66 Yes 17 0.1 No 0 0 No -29 0.95 Yes 41 88.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 57189098 - NM_017611 SLC43A3 1 0.05 0.21 12 8.97 78.65 27 5.02 No 14 0.23 No 0 0 No -22 0.69 Yes 44 87.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 57191197 - NM_017611 SLC43A3 1 0.23 0.89 39 5.52 80.71 25 4.93 No 71 -4.35 No 24 0.73 Yes -24 0.76 Yes 46 93.93 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 57191550 - NM_017611 SLC43A3 1 0.03 0.11 7 8.99 97.41 26 4.5 No 13 0.57 No 0 0 No -25 0.78 Yes 45 71.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 57193179 - NM_017611 SLC43A3 1 0.06 0.15 10 -4.03 0 27 5.7 Yes 72 -3.71 No 25 0.91 Yes -26 0.65 No 44 57.8 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 57193183 - NM_017611 SLC43A3 1 4.38 14.07 72 7.51 87.18 23 5.36 No 68 -3.71 No 22 0.74 Yes -22 0.69 Yes 48 72.32 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 57193863 - NM_017611 SLC43A3 1 24.99 62.39 72 12.82 90.29 30 5.57 Yes 17 1.07 Yes 29 0.76 Yes -29 0.56 No 41 76.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 108062023 + NM_080546 SLC44A1 1 2.69 1.43 50 10.44 81.39 31 7.07 Yes 18 2.02 Yes 30 0.97 Yes -30 0.97 Yes 40 97.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 108070808 + NM_080546 SLC44A1 1 0.86 0.44 26 10.49 84.54 34 5.92 Yes 21 1.64 Yes 0 0 No -33 0.65 No 37 77.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 108072029 + NM_080546 SLC44A1 1 0.98 0.56 26 4.87 73.82 20 5.83 Yes 67 0.14 No 0 0 No -56 0.48 No 14 66.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 108098847 + NM_080546 SLC44A1 1 0.5 0.85 36 7.85 86.68 22 4.65 No 55 1.19 Yes 0 0 No -21 0.82 Yes 49 86.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 108112858 + NM_080546 SLC44A1 1 0.51 1.46 52 10.48 83.35 25 6.21 Yes 22 1.18 Yes 0 0 No -24 0.89 Yes 46 93.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 108119431 + NM_080546 SLC44A1 1 0.67 0.71 34 6.85 88.26 28 5.17 No 75 -2.42 No 27 0.75 Yes -22 0.5 No 43 73.24 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 108126839 + NM_080546 SLC44A1 1 0.27 0.28 15 1.09 0 41 9.09 Yes 4 0.74 No 0 0 No -40 0.87 Yes 30 93.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 108151039 + NM_080546 SLC44A1 1 0.11 0.15 8 7.37 80.98 24 6.32 Yes 11 1.97 Yes 0 0 No -23 0.94 Yes 47 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 108152184 + NM_080546 SLC44A1 1 3 4.75 69 9.9 83.95 24 4.97 No 11 0.07 No 24 0.69 Yes -24 0.69 Yes 46 65.67 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 10739347 + NM_020428 SLC44A2 1 0.32 0.19 11 6.31 86.21 21 5.2 No 76 0.79 Yes 0 0 No -20 0.62 No 50 72.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 10742721 + NM_020428 SLC44A2 1 0.13 0.18 9 0.67 83.78 22 6.13 Yes 9 1.61 Yes 0 0 No -24 0.75 Yes 46 87.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10746636 + NM_020428 SLC44A2 1 0.1 0.11 8 4.47 85.02 17 5.39 No 4 1.2 Yes 0 0 No -27 0.55 No 43 62.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 10751179 + NM_020428 SLC44A2 1 0.08 0.11 7 6.09 84.95 11 5.29 No 17 0.11 No 0 0 No -29 0.5 No 41 64.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10753572 + NM_020428 SLC44A2 1 0.38 0.44 23 -5.83 0 155 13.53 Yes NA NA NA 34 0.25 Yes -42 0.4 No 28 67.45 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 29287219 - NM_001347960 SLC46A3 1 0.63 0.1 7 -3.05 81.81 31 7.71 Yes 43 1.18 Yes 0 0 No -30 0.5 No 45 42.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 27898474 + NM_018158 SLC4A1AP 1 0.5 0.46 26 5.73 80.98 17 3.97 No 4 0.97 Yes 0 0 No -22 0.52 No 48 80.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 27907906 + NM_018158 SLC4A1AP 1 0.99 0.85 38 3.42 73.29 25 5.81 Yes 64 1.45 Yes 0 0 No -24 0.91 Yes 46 83.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 150761949 + NM_001199694 SLC4A2 1 0.24 0.14 8 -3.57 82.76 20 4.9 No 32 0.87 Yes 0 0 No -17 0.6 No 51 65.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 150768487 + NM_001199694 SLC4A2 1 2.52 1.32 47 3.1 0 15 4.47 No 18 0.93 Yes 0 0 No -30 0.67 Yes 40 61.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 150768778 + NM_001199694 SLC4A2 1 0.43 0.26 13 -19.42 66.38 25 5.57 Yes 12 0.86 Yes 20 0.92 Yes -24 0.74 Yes 46 84.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 150771088 + NM_001199694 SLC4A2 1 0.47 0.36 18 4.36 87.32 24 4.9 No 11 0.81 Yes 28 0.77 Yes -23 0.91 Yes 47 81.82 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 27439216 - NM_001258380 SLC4A7 1 0.23 0.19 11 3.96 80.03 29 4.21 No 0 0.85 Yes 0 0 No -26 0.34 No 45 47.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 27439716 - NM_001258380 SLC4A7 1 0.22 0.19 11 4.55 76.71 31 6.93 Yes 18 0.39 No 0 0 No -30 0.88 Yes 40 88.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 27443156 - NM_001258380 SLC4A7 1 0.14 0.14 9 5.88 79.43 28 6.66 Yes 75 0.35 No 0 0 No -27 0.69 Yes 43 78.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 27444793 - NM_001258380 SLC4A7 1 0.34 0.13 8 6.82 81.02 56 6.28 Yes 76 0.9 Yes 0 0 No -19 0.32 No 36 45.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 27450754 - NM_001258380 SLC4A7 1 0.55 0.21 14 3.62 82.09 24 6.59 Yes 11 1.25 Yes 0 0 No -23 0.97 Yes 47 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 27473161 - NM_001258380 SLC4A7 1 0.55 0.26 16 7.56 96.12 31 4.95 No 61 0.51 No 30 0.85 Yes -30 0.95 Yes 40 94.56 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 155108786 + NM_001287587 SLC50A1 1 0.16 0.18 9 0.51 0 17 4.57 No 4 -0.87 No 27 0.68 Yes -45 0.23 No 56 36.91 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 155110054 + NM_001287587 SLC50A1 1 0.35 0.24 15 7.68 89.6 27 3.96 No 69 -2.82 No 20 0.68 Yes -20 0.6 No 50 81.76 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 155110637 + NM_001287587 SLC50A1 1 5.32 6.94 72 7.46 77.6 30 6 Yes 69 -3.21 No 23 0.61 Yes -30 0.42 No 47 25.52 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 155110640 + NM_001287587 SLC50A1 1 1.78 2.29 63 3.79 82.23 33 6.24 Yes 72 -3.2 No 22 0.94 Yes -26 0.34 No 47 27.9 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 155110671 + NM_001287587 SLC50A1 1 1 1.22 48 6.09 85.69 24 4.99 No 26 0.44 No 0 0 No -23 0.85 Yes 47 85.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 145583774 + NM_024531 SLC52A2 1 1.57 1.14 41 7.51 81.85 23 7.07 Yes 10 2.23 Yes 22 0.94 Yes -22 0.94 Yes 48 91.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 145583831 + NM_024531 SLC52A2 1 0.21 0.14 8 9.15 86.14 21 5.64 Yes 67 2.21 Yes 20 0.41 Yes -22 0.56 No 50 58.25 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 145584260 + NM_024531 SLC52A2 1 0.33 0.24 14 1.11 0 19 4.47 No 21 1.92 Yes 0 0 No -18 0.82 Yes 52 59.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 35446435 + NM_006933 SLC5A3 1 0.88 0.86 35 6.16 77.6 22 5.83 Yes NA NA NA 0 0 No -21 0.68 Yes 49 63.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 35450620 + NM_006933 SLC5A3 1 0.15 0.14 9 6.17 85.4 55 7.45 Yes 6 0.34 No 0 0 No -29 0.54 No 35 63.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 35466117 + NM_006933 SLC5A3 1 0.25 0.22 12 9.18 90.79 33 5.41 No 4 0.08 No 0 0 No -27 0.45 No 38 57.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 35466435 + NM_006933 SLC5A3 1 0.19 0.17 10 10.52 91 26 5.52 No 72 0.37 No 0 0 No -26 0.57 No 45 47.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 35468229 + NM_006933 SLC5A3 1 2.82 2.56 62 4.99 75.24 46 7.55 Yes 58 1.36 Yes 0 0 No -29 0.66 No 41 88.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 35468233 + NM_006933 SLC5A3 1 0.56 0.49 26 -7.01 0 50 7.71 Yes 62 1.35 Yes 0 0 No -33 0.64 No 37 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 35475133 + NM_006933 SLC5A3 1 13.94 12.22 72 11.23 80.56 23 4.77 No 10 1.2 Yes 0 0 No -22 0.76 Yes 48 86.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27424939 - NM_021095 SLC5A6 1 0.21 0.14 10 2.46 0 48 7.34 Yes 35 1.79 Yes 0 0 No -47 0.93 Yes 23 91.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27426795 - NM_021095 SLC5A6 1 0.38 0.43 23 0.77 0 19 4.47 No 44 -1.53 No 0 0 No -18 0.49 No 52 53.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27426896 - NM_021095 SLC5A6 1 0.93 0.99 42 6.4 70.98 25 6 Yes 12 0.68 No 0 0 No -24 0.81 Yes 46 93.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 27427428 - NM_021095 SLC5A6 1 2.06 1.79 62 7.25 87.29 24 5.1 No 32 2.34 Yes 0 0 No -23 0.85 Yes 47 89.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27427431 - NM_021095 SLC5A6 1 0.76 0.61 33 6.45 88.34 21 4.8 No 29 2.34 Yes 0 0 No -20 0.83 Yes 50 91.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27428899 - NM_021095 SLC5A6 1 0.46 0.56 31 8.38 79.16 62 8.06 Yes 55 -2.01 No 0 0 No -22 0.52 No 48 49.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27429568 - NM_021095 SLC5A6 1 0.11 0.13 8 8.48 84.48 18 5.74 Yes 74 -2.7 No 0 0 No -20 0.72 Yes 41 65.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 27431317 - NM_021095 SLC5A6 1 0.06 0.11 8 4.4 80.39 50 5.52 No 16 2.03 Yes 28 0.93 Yes -28 0.94 Yes 42 96.3 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 27431555 - NM_021095 SLC5A6 1 0.56 0.9 34 6.82 82.88 47 6.35 Yes 27 1.63 Yes 33 0.54 Yes -33 0.59 No 37 59.73 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 28527348 - NM_001045 SLC6A4 1 2.21 0.47 24 7.61 90.63 20 5.65 Yes 7 1.22 Yes 0 0 No -25 0.91 Yes 45 90.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 28532414 - NM_001045 SLC6A4 1 0.7 0.15 7 8.71 86.64 34 7.13 Yes 21 0.55 No 0 0 No -25 0.51 No 45 63.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 14485135 + NM_003043 SLC6A6 1 3.3 0.65 27 -2.44 0 38 6.16 Yes 28 0.53 No 27 0.72 Yes -31 0.75 Yes 39 78.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 14486245 + NM_003043 SLC6A6 1 2.09 0.69 36 7.71 85.45 12 5 No -1 1.37 Yes 27 0.88 Yes -27 0.88 Yes 43 80.28 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 14496439 + NM_003043 SLC6A6 1 0.36 0.11 7 10.42 95.97 32 6.49 Yes 33 1.65 Yes 0 0 No -31 0.91 Yes 39 96.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 14521627 + NM_003043 SLC6A6 1 0.33 0.13 8 3.97 74.04 30 4.11 No 17 0.74 No 0 0 No -29 0.72 Yes 47 68.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 30090451 - NM_003045 SLC7A1 1 1.35 2.03 57 5.67 73.28 27 5.02 No 8 0.41 No 0 0 No -26 0.85 Yes 44 76.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 30093711 - NM_003045 SLC7A1 1 0.17 0.28 16 3.75 78.19 22 4.39 No 69 0.17 No 28 0.36 Yes -20 0.84 Yes 50 70.71 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 30093725 - NM_003045 SLC7A1 1 0.09 0.13 8 6.93 79.96 12 6.08 Yes 55 0.16 No 28 0.36 Yes -30 0.63 No 40 71.52 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr13 30101503 - NM_003045 SLC7A1 1 0.17 0.26 16 8.71 86.96 22 5.66 Yes 9 1.65 Yes 0 0 No -21 0.8 Yes 49 78.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 30103964 - NM_003045 SLC7A1 1 0.52 0.69 35 9.44 86.06 26 5.98 Yes 13 0.47 No 0 0 No -25 0.7 Yes 45 87.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 30104874 - NM_003045 SLC7A1 1 0.09 0.13 8 -8.13 0 15 3.87 No 39 0.34 No 32 0.5 Yes -14 0.58 No 56 49.78 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 30116812 - NM_003045 SLC7A1 1 1.94 1.86 54 9.91 92.91 30 5.65 Yes 17 0.88 Yes 0 0 No -29 0.94 Yes 41 97.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 30124458 - NM_003045 SLC7A1 1 0.43 0.42 23 3.85 0 19 4.35 No 30 0.92 Yes 0 0 No -18 0.75 Yes 41 60.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 87877426 - NM_003486 SLC7A5 1 0.22 0.64 30 7.87 91.19 28 6.85 Yes 15 1.68 Yes 0 0 No -27 0.86 Yes 43 93.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68307697 + NM_001076785 SLC7A6 1 0.41 0.18 11 2.13 84.41 35 5.92 Yes 22 0.57 No 28 0.49 Yes -34 0.39 No 42 71.63 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 68305236 + NM_001076785 SLC7A6 1 0.48 0.19 11 3.51 0 55 5.67 Yes 39 0.71 No 0 0 No -34 0.66 Yes 36 83.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68306860 + NM_001076785 SLC7A6 1 2.87 1.25 44 5.43 81.79 31 5.9 Yes 39 -1.91 No 23 0.18 Yes -30 0.8 Yes 40 54.23 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 68307697 + NM_001076785 SLC7A6 1 18.75 8.06 72 2.13 84.41 35 5.92 Yes 22 0.57 No 28 0.49 Yes -34 0.39 No 42 71.63 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 68307703 + NM_001076785 SLC7A6 1 0.46 0.21 12 -5.23 0 9 3.87 No 28 0.56 No 25 0.84 Yes -40 0.43 No 36 73.53 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 68307724 + NM_001076785 SLC7A6 1 3.51 1.54 58 2.09 0 30 5.39 No 49 0.54 No 25 0.84 Yes -29 0.64 No 15 68.07 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 68318782 + NM_001076785 SLC7A6 1 0.28 0.26 16 11.15 88.27 53 10.99 Yes 40 2.72 Yes 0 0 No -52 0.66 Yes 18 85.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68321225 + NM_001076785 SLC7A6 1 18.31 16.92 72 10.75 83.2 31 8.03 Yes -3 1.18 Yes 31 0.66 Yes -26 0.33 No 39 46.9 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 68324394 + NM_001076785 SLC7A6 1 0.13 0.14 10 10.27 91.01 67 7.72 Yes 66 -2.04 No 0 0 No -24 0.54 No 46 59.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68327845 + NM_001076785 SLC7A6 1 1.21 1.51 49 5.4 90.92 28 5.08 No 67 1.22 Yes 0 0 No -27 0.76 Yes 43 63.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68336413 - NM_032178 SLC7A6OS 1 17.88 8.92 72 -1.67 72.49 25 4.76 No 2 1.19 Yes 24 0.9 Yes -24 0.89 Yes 46 71.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 23243214 - NM_001126106 SLC7A7 1 0.51 0.18 9 8.29 89.59 26 5.22 No 13 1.08 Yes 0 0 No -25 0.92 Yes 45 92.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23243258 - NM_001126106 SLC7A7 1 0.74 0.32 17 6.31 85 66 8.07 Yes 53 1.25 Yes 0 0 No -32 0.72 Yes 38 69.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 23248051 - NM_001126106 SLC7A7 1 0.43 0.1 7 7.62 89.56 21 5.2 No 8 1.12 Yes 0 0 No -20 0.7 Yes 50 93.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113754430 - NM_001330466 SLC8B1 1 3.23 0.25 15 8.58 94.75 30 5.68 Yes 42 1.2 Yes 29 0.78 Yes -29 0.72 Yes 41 71.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 27429213 - NR_046474 SLC9A1 1 0.52 0.24 12 5.79 85.89 25 5.57 Yes 33 0.34 No 0 0 No -24 0.8 Yes 46 75.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 72764288 + NM_004252 SLC9A3R1 1 0.42 0.47 24 -8.6 73.43 33 7.94 Yes 33 1.95 Yes 0 0 No -32 0.81 Yes 38 80.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 135082736 + NM_001330652 SLC9A6 1 0.62 0.33 19 8.73 85.56 29 6.21 Yes 11 0.11 No 0 0 No -31 0.65 No 39 89.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 46461706 - NM_032591 SLC9A7 1 2.39 5.36 70 6.86 84.61 17 5.29 No -2 0.72 No 0 0 No -26 0.64 No 44 51.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 46490886 - NM_032591 SLC9A7 1 1.64 2.67 66 10.09 85.59 33 5.07 No 31 0.18 No 0 0 No -32 0.8 Yes 38 92.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 46494102 - NM_032591 SLC9A7 1 0.1 0.15 10 -1.33 79.44 46 5.25 No 29 0.85 Yes 0 0 No -22 0.7 Yes 48 66.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 46497488 - NM_032591 SLC9A7 1 0.29 0.36 18 8.21 95.4 22 5.88 Yes 9 2.34 Yes 0 0 No -21 0.75 Yes 49 80.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 46506754 - NM_032591 SLC9A7 1 0.53 0.76 36 5.59 75.73 22 5.8 Yes 9 1.39 Yes 0 0 No -21 0.84 Yes 49 72.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 46507826 - NM_032591 SLC9A7 1 0.31 0.47 24 1.02 81.79 16 4.02 No 71 1.21 Yes 0 0 No -25 0.85 Yes 45 63.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 46507829 - NM_032591 SLC9A7 1 2.25 3.26 65 5.72 81.12 13 3.81 No 68 1.21 Yes 0 0 No -22 0.86 Yes 48 58.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 46510631 - NM_032591 SLC9A7 1 0.21 0.47 31 5.89 83.22 22 4.74 No 44 0.2 No 0 0 No -21 0.49 No 49 80.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 46510631 - NM_032591 SLC9A7 1 0.09 0.21 13 5.89 83.22 22 4.74 No 44 0.2 No 0 0 No -21 0.49 No 49 80.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 46544846 - NM_032591 SLC9A7 1 0.11 0.13 8 10.62 88.31 27 5.32 No 55 -3.9 No 0 0 No -24 0.31 No 44 44.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 46611716 - NM_032591 SLC9A7 1 0.39 0.38 21 7.59 90.69 31 4.3 No 5 0.4 No 0 0 No -24 0.74 Yes 46 72.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 46616746 - NM_032591 SLC9A7 1 0.12 0.13 9 3.96 72.77 30 5.39 No 58 -4.52 No 0 0 No -29 0.83 Yes 41 54.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 48443501 + NR_048538 SLC9A8 1 1.33 0.4 24 9.62 95.2 33 5.59 Yes 20 0.8 Yes 0 0 No -24 0.86 Yes 46 90.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 48451545 + NR_048538 SLC9A8 1 0.45 0.14 9 5.63 77.6 32 6.07 Yes 19 0.14 No 0 0 No -25 0.52 No 35 48.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 48467298 + NR_048538 SLC9A8 1 14.14 2.03 58 5.3 88.11 31 6.62 Yes 47 1.08 Yes 30 0.86 Yes -30 0.86 Yes 40 84.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 48467346 + NR_048538 SLC9A8 1 199.43 26.69 72 11.22 98.91 51 7.55 Yes 66 0.63 No 23 0.03 Yes -50 0.64 No 20 85.61 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 48476036 + NR_048538 SLC9A8 1 6.07 1.61 58 10.33 85.86 39 7.13 Yes 26 1.86 Yes 0 0 No -38 0.81 Yes 32 91.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 48476041 + NR_048538 SLC9A8 1 0.55 0.14 9 2.62 0 44 7.47 Yes 31 1.83 Yes 0 0 No -43 0.7 Yes 27 79.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 48479234 + NR_048538 SLC9A8 1 0.69 0.18 10 6.46 77.18 24 5.21 No 11 0.98 Yes 0 0 No -23 0.6 No 47 69.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 48479470 + NR_048538 SLC9A8 1 2.35 0.64 30 2.95 0 43 7.05 Yes 22 0.73 No 0 0 No -30 0.42 No 40 61.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 48481264 + NR_048538 SLC9A8 1 9.22 1.46 51 9.32 85.1 51 5.78 Yes 38 1.73 Yes 30 0.34 Yes -30 0.75 Yes 40 70.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 48481271 + NR_048538 SLC9A8 1 1.38 0.24 13 -11.57 0 12 4 No 45 1.73 Yes 30 0.34 Yes -11 0.67 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 48484773 + NR_048538 SLC9A8 1 0.34 0.1 7 10.89 89.44 30 4.79 No 1 1.29 Yes 0 0 No -34 0.38 No 40 35.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 48497547 + NR_048538 SLC9A8 1 0.39 0.14 9 0.28 59.33 61 7.52 Yes 48 1.31 Yes 0 0 No -41 0.38 No 11 41.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 48502100 + NR_048538 SLC9A8 1 1.24 0.31 15 2.77 65.91 22 5.29 No 74 1.14 Yes 0 0 No -21 0.84 Yes 49 80.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 48503130 + NR_048538 SLC9A8 1 2.09 0.44 16 11.62 89.66 25 7.87 Yes 12 1.61 Yes 0 0 No -24 0.84 Yes 46 88.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 143291082 - NM_173653 SLC9A9 1 8.57 0.67 34 8.48 86.92 30 7.27 Yes 17 0.29 No 0 0 No -29 0.51 No 40 43.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 143292165 - NM_173653 SLC9A9 1 1.68 0.17 11 8.67 89.69 26 5.55 No 30 1.55 Yes 0 0 No -42 0.42 No 45 60.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 143292187 - NM_173653 SLC9A9 1 7.27 0.65 31 5.73 79.25 21 6.24 Yes 8 1.55 Yes 0 0 No -20 0.86 Yes 50 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 143374434 - NM_173653 SLC9A9 1 3.3 0.5 25 3.73 78.3 14 4.9 No 1 0.23 No 0 0 No -21 0.58 No 51 41.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 143464771 - NM_173653 SLC9A9 1 0.68 0.1 7 10.82 97.53 25 6.86 Yes 12 2.45 Yes 0 0 No -24 0.89 Yes 46 93.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 143566826 - NM_173653 SLC9A9 1 13.4 2.15 60 6.65 90.27 23 5.79 Yes 0 1.61 Yes 22 0.86 Yes -22 0.76 Yes 48 78.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 103957676 - NM_178833 SLC9B2 1 1.33 0.6 29 11.82 93.82 26 7.26 Yes 62 1.28 Yes 0 0 No -28 0.65 No 45 68.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 103963549 - NM_178833 SLC9B2 1 0.63 0.26 14 10.87 89.5 33 5.83 Yes 20 0.43 No 32 0.89 Yes -32 0.65 No 38 56.52 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 103964512 - NM_178833 SLC9B2 1 0.45 0.11 7 5.9 84.75 32 5.92 Yes 19 0.03 No 0 0 No -31 0.87 Yes 39 82.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103968326 - NM_178833 SLC9B2 1 3.57 0.9 42 8.43 93.59 17 6.3 Yes 4 0.3 No 0 0 No -34 0.83 Yes 36 87.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103968326 - NM_178833 SLC9B2 1 0.37 0.11 7 8.43 93.59 17 6.3 Yes 4 0.3 No 0 0 No -34 0.83 Yes 36 87.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 103968373 - NM_178833 SLC9B2 1 0.64 0.18 11 7.46 0 14 4.47 No 61 -3.72 No 0 0 No -39 0.44 No 31 49.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103971163 - NM_178833 SLC9B2 1 2.72 1.26 49 3.01 0 33 6.4 Yes 37 1.32 Yes 0 0 No -32 0.97 Yes 38 96.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 103986926 - NM_178833 SLC9B2 1 17.08 8.79 71 11.73 97.95 26 5.66 Yes 34 0.46 No 25 0.73 Yes -25 0.75 Yes 45 65.37 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr4 103986949 - NM_178833 SLC9B2 1 0.22 0.13 7 5.75 73.2 29 4.83 No 11 0.46 No 25 0.73 Yes -23 0.9 Yes 47 87.97 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 103988695 - NM_178833 SLC9B2 1 0.29 0.15 10 -5.74 50.76 63 7.92 Yes 74 0.65 No 25 0.38 Yes -24 0.6 No 38 22 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 61299506 + NM_016354 SLCO4A1 1 1.59 0.44 21 4.58 85.48 33 7.25 Yes 8 0.85 Yes 21 0.66 Yes -32 0.93 Yes 38 86.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 61299509 + NM_016354 SLCO4A1 1 1.95 0.61 28 4.73 78.94 36 7.43 Yes 11 0.85 Yes 21 0.66 Yes -35 0.86 Yes 35 79.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 101597109 - NM_180991 SLCO4C1 1 0.87 0.17 9 2.58 0 85 7.74 Yes 28 0.89 Yes 0 0 No -40 0.71 Yes 30 84.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 70586062 - NM_030958 SLCO5A1 1 0.41 0.15 9 6.67 85.02 37 5.59 Yes -4 1.15 Yes 0 0 No -25 0.73 Yes 45 53.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 70588440 - NM_030958 SLCO5A1 1 0.26 0.11 8 6.09 87.06 13 4.75 No 69 1.58 Yes 0 0 No -20 0.73 Yes 42 53.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 70602629 - NM_030958 SLCO5A1 1 0.84 0.42 18 6.25 73.05 34 4.74 No 60 0.87 Yes 0 0 No -33 0.82 Yes 37 94.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 70632235 - NM_030958 SLCO5A1 1 1.29 0.22 12 9.61 83.53 18 5.99 Yes 44 0.31 No 0 0 No -22 0.62 No 48 50.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 70642143 - NM_030958 SLCO5A1 1 2.16 0.42 21 4.79 82.15 35 6.66 Yes 61 0.65 No 0 0 No -28 0.53 No 42 58.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 70653434 - NM_030958 SLCO5A1 1 1.48 0.9 40 7.38 87.53 20 4.9 No 62 1.48 Yes 0 0 No -24 0.28 No 46 54.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 70660166 - NM_030958 SLCO5A1 1 4.34 2.75 64 9.61 94.18 29 5.05 No 13 0.17 No 0 0 No -25 0.71 Yes 45 54.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 70664472 - NM_030958 SLCO5A1 1 0.44 0.26 15 8.44 82.57 28 6.97 Yes 15 0.35 No 0 0 No -28 0.73 Yes 42 76.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 70667804 - NM_030958 SLCO5A1 1 3.07 1.74 58 4.11 68.31 31 8.68 Yes 18 0.14 No 0 0 No -22 0.34 No 42 64.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 70671023 - NM_030958 SLCO5A1 1 0.58 0.38 18 12.01 96.09 20 6.07 Yes 7 1.18 Yes 0 0 No -19 0.81 Yes 47 66.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 70673728 - NM_030958 SLCO5A1 1 2.92 1.64 54 6.33 75.66 13 4.61 No 0 1.14 Yes 25 0.91 Yes -21 0.62 No 45 75.91 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 70685210 - NM_030958 SLCO5A1 1 0.2 0.14 8 10.49 86.02 29 7.69 Yes 10 1.04 Yes 0 0 No -28 0.76 Yes 42 84.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 70711042 - NM_030958 SLCO5A1 1 0.2 0.14 8 8.57 91.91 19 6.07 Yes 6 1.02 Yes 0 0 No -19 0.55 No 51 53.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 70714571 - NM_030958 SLCO5A1 1 2.72 1.5 49 5.21 84.47 23 7.35 Yes 10 1.05 Yes 0 0 No -22 0.93 Yes 48 95.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 70740256 - NM_030958 SLCO5A1 1 1.21 0.61 28 7.36 91.44 33 4.42 No 3 1.11 Yes 0 0 No -32 0.46 No 38 67.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 70740326 - NM_030958 SLCO5A1 1 2.06 1.06 39 10.64 85.88 30 5.46 No 25 0.69 No 0 0 No -27 0.62 No 43 52.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 70743492 - NM_030958 SLCO5A1 1 0.27 0.13 9 11.36 84.5 42 8.8 Yes 29 1.33 Yes 0 0 No -41 0.86 Yes 29 84.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 93984207 + NM_032290 SLF1 1 0.27 0.14 9 9.32 85.76 23 4.9 No 48 0.92 Yes 0 0 No -22 0.86 Yes 48 63.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 93988979 + NM_032290 SLF1 1 0.22 0.13 8 -5.63 61.59 39 6.19 Yes 58 0.03 No 0 0 No -25 0.71 Yes 38 31.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 94001611 + NM_032290 SLF1 1 13.52 6.22 72 4.17 77.55 43 6.71 Yes 30 0.25 No 32 0.32 Yes -32 0.71 Yes 38 80.15 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 94005896 + NM_032290 SLF1 1 0.42 0.14 9 7.32 78.67 25 5.34 No 40 0.67 No 0 0 No -28 0.73 Yes 42 71.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94011962 + NM_032290 SLF1 1 0.93 0.25 12 4.59 81.02 32 5.9 Yes 19 0.97 Yes 0 0 No -31 0.88 Yes 39 88.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 94022349 + NM_032290 SLF1 1 2.19 0.86 42 6.33 82.98 44 7.39 Yes 76 1.07 Yes 0 0 No -43 0.88 Yes 27 93.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 94027340 + NM_032290 SLF1 1 0.38 0.22 15 10.61 92.65 23 6.08 Yes 10 0.93 Yes 0 0 No -22 0.88 Yes 48 86.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 94028261 + NM_032290 SLF1 1 0.48 0.19 10 11.71 98.14 23 5.74 Yes 10 0.17 No 0 0 No -22 0.82 Yes 48 57.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 102675759 + NM_001136123 SLF2 1 0.44 0.21 13 -4.45 0 31 6.03 Yes 33 0.43 No 0 0 No -35 0.46 No 35 88.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 102683734 + NM_001136123 SLF2 1 14.83 9.42 72 1.5 84.45 27 5.53 No 39 0.17 No 0 0 No -26 0.38 No 49 52.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 102693157 + NM_001136123 SLF2 1 3.28 1.04 45 5.54 79.41 24 6.03 Yes 51 1.31 Yes 0 0 No -23 0.91 Yes 47 86.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 102711710 + NM_001136123 SLF2 1 0.49 0.32 18 7.68 73.44 52 7.69 Yes 17 0.97 Yes 0 0 No -29 0.55 No 40 56.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33681986 - NM_001104590 SLFN11 1 0.38 0.18 9 8.64 78.88 29 4.89 No 71 0.78 Yes 0 0 No -31 0.82 Yes 39 89.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33694063 - NM_001104590 SLFN11 1 11.83 2.08 53 6.91 87.02 27 5.13 No 2 0.77 No 26 0.89 Yes -26 0.67 Yes 23 78.89 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 33740375 - NM_018042 SLFN12 1 1.34 0.28 16 7.81 85.4 33 4.75 No 7 1.6 Yes 0 0 No -30 0.39 No 44 62.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33771721 - NM_144682 SLFN13 1 3.21 1.6 48 4.77 67.69 37 4.51 No 25 -1.05 No 31 0.54 Yes -36 0.49 No 39 52.69 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 33771823 - NM_144682 SLFN13 1 0.15 0.1 7 1.27 56.28 43 6.76 Yes 72 1.57 Yes 0 0 No -42 0.49 No 28 85.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33773773 - NM_144682 SLFN13 1 6.63 3.03 66 9.48 95.14 47 7.75 Yes 27 1.44 Yes 19 0.7 Yes -29 0.65 No 31 49.53 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 33773952 - NM_144682 SLFN13 1 4.38 2.1 57 3.03 0 19 4.46 No 64 -4.99 No 18 0.49 Yes -21 0.58 No 49 60.93 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 78178083 + NR_052025 SLIRP 1 0.06 0.43 21 6.53 86.16 20 7.14 Yes 69 0.86 Yes 28 0.47 Yes -19 0.44 No 51 59.72 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 78183822 + NR_052025 SLIRP 1 0.96 6.1 71 11.85 86.69 18 5.61 Yes 52 0.96 Yes 20 0.94 Yes -25 0.75 Yes 45 74.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 78183844 + NR_052025 SLIRP 1 3.78 24.25 72 0.56 0 9 2.76 No 74 0.96 Yes 20 0.94 Yes -26 0.87 Yes 44 95 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 105752714 + NM_001304743 SLK 1 0.34 0.36 21 1.95 65.43 27 6.48 Yes 14 1.24 Yes 29 0.48 Yes -26 0.75 Yes 44 74.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 105770573 + NM_001304743 SLK 1 3.97 3.17 66 5.53 80.95 35 6.86 Yes 70 0.39 No 34 0.56 Yes -34 0.51 No 36 82.86 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 105785304 + NM_001304743 SLK 1 0.14 0.13 8 -5.43 0 15 4 No 33 -3.8 No 26 0.44 Yes -30 0.51 No 56 38.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 57768633 + NM_001304420 SLMAP 1 0.2 0.18 11 6.77 81.52 67 6.3 Yes 22 1.66 Yes 0 0 No -34 0.98 Yes 36 97.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 57806339 + NM_001304420 SLMAP 1 0.13 0.14 10 8.87 96.89 26 4.03 No 59 -2.83 No 0 0 No -24 0.6 No 46 81.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 57811487 + NM_001304420 SLMAP 1 0.53 0.5 28 9.05 70.51 33 5.05 No 16 0.2 No 0 0 No -28 0.65 No 38 59.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 57817156 + NM_001304420 SLMAP 1 0.13 0.13 8 3.8 71.43 29 4.08 No 72 1.18 Yes 0 0 No -28 0.68 Yes 42 48.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 57830462 + NM_001304420 SLMAP 1 0.46 0.5 26 2.32 84.41 29 5.91 Yes 70 -1.91 No 0 0 No -28 0.57 No 42 78.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 57835761 + NM_001304420 SLMAP 1 0.17 0.17 12 6.28 85.99 29 6.23 Yes 27 0.11 No 0 0 No -28 0.6 No 42 76.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 57842286 + NM_001304420 SLMAP 1 0.64 0.64 32 5.38 73.4 46 5.2 No 24 0.1 No 0 0 No -42 0.55 No 28 62.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 57850968 + NM_001304420 SLMAP 1 21.64 3.6 70 7.02 80.96 21 5.34 No 30 0.84 Yes 31 0.81 Yes -31 0.55 No 39 47.97 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 57850968 + NM_001304420 SLMAP 1 83.3 14.1 72 7.02 80.96 21 5.34 No 30 0.84 Yes 31 0.81 Yes -31 0.55 No 39 47.97 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 57875772 + NM_001304420 SLMAP 1 1.09 0.42 21 -7.24 0 26 7.14 Yes 13 1.82 Yes 20 0.61 Yes -25 0.85 Yes 45 84.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 57875772 + NM_001304420 SLMAP 1 0.45 0.17 9 -7.24 0 26 7.14 Yes 13 1.82 Yes 20 0.61 Yes -25 0.85 Yes 45 84.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 57881973 + NM_001304420 SLMAP 1 3.6 3.49 69 9.71 92.78 30 4.67 No 17 -1.24 No 0 0 No -29 0.52 No 41 70.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 57898227 + NM_001304420 SLMAP 1 0.2 0.21 12 2.5 72.83 22 5.74 Yes 46 -2.43 No 0 0 No -20 0.33 No 50 39.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 57898230 + NM_001304420 SLMAP 1 0.59 0.58 29 4.06 78.05 25 6 Yes 49 -2.43 No 0 0 No -23 0.46 No 47 47.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 57911571 + NM_001304420 SLMAP 1 1.22 0.25 15 7.93 78.79 27 5.71 Yes 50 1.16 Yes 20 0.38 Yes -26 0.61 No 44 52.68 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 57911571 + NM_001304420 SLMAP 1 321.9 65.28 72 7.93 78.79 27 5.71 Yes 50 1.16 Yes 20 0.38 Yes -26 0.61 No 44 52.68 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 57610212 - NR_037930 SLMO2-ATP5E 1 0.02 0.13 8 7.59 83.94 34 5.82 Yes 48 1.03 Yes 28 0.76 Yes -33 0.75 Yes 37 71.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 59179820 - NM_024755 SLTM 1 0.92 1.83 56 9.38 88.11 29 4.24 No 44 1.26 Yes 0 0 No -29 0.7 Yes 47 67.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 59180711 - NM_024755 SLTM 1 0.05 0.1 7 -0.57 0 16 4.36 No 35 -2.46 No 0 0 No -25 0.49 No 45 33.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59180773 - NM_024755 SLTM 1 0.27 0.58 29 -2.88 63.93 28 4.3 No 70 -5.49 No 27 0.73 Yes -27 0.52 No 59 32.22 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 59181742 - NM_024755 SLTM 1 0.21 0.22 13 -7.29 0 16 4.58 No 53 0.56 No 0 0 No -60 0.61 No 18 57.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 59185284 - NM_024755 SLTM 1 0.13 0.26 14 5.85 79.71 27 5.65 Yes 48 0.22 No 26 0.73 Yes -27 0.39 No 44 35.22 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 59191909 - NM_024755 SLTM 1 5.67 6.96 72 3.32 72.19 19 5.48 No 57 0.28 No 27 0.37 Yes -27 0.36 No 47 35.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 59192080 - NM_024755 SLTM 1 3.61 4.54 67 2.85 81.7 19 5.74 Yes 6 1.13 Yes 20 0.44 Yes -23 0.46 No 38 61.3 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 59192083 - NM_024755 SLTM 1 40.2 51.31 72 6.14 87.07 16 5.48 No 3 1.16 Yes 20 0.44 Yes -29 0.59 No 41 64.98 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 59192958 - NM_024755 SLTM 1 0.21 0.28 15 4.3 77.56 32 5.65 Yes 75 1.8 Yes 31 0.63 Yes -31 0.44 No 53 55.65 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 59209220 - NM_024755 SLTM 1 2.03 3.5 66 1.11 68.19 20 5.23 No 29 0.92 Yes 25 0.84 Yes -25 0.82 Yes 45 85.16 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 59213737 - NM_024755 SLTM 1 0.08 0.14 7 5.92 80.23 29 5.27 No 47 1.58 Yes 0 0 No -28 0.48 No 42 48.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 59213784 - NM_024755 SLTM 1 0.06 0.11 7 7.33 76.38 27 6.85 Yes 0 1.63 Yes 26 0.82 Yes -26 0.8 Yes 44 82.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 59221645 - NM_024755 SLTM 1 0.09 0.14 7 4.63 83.28 35 6.38 Yes 22 1.44 Yes 0 0 No -39 0.55 No 31 78.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 159840565 - NM_006425 SLU7 1 0.07 0.11 7 -4.02 66.67 12 4.8 No 64 0.81 Yes 0 0 No -26 0.38 No 44 83.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 159840626 - NM_006425 SLU7 1 0.07 0.14 7 -1.62 80.11 22 5.03 No 3 0.86 Yes 0 0 No -21 0.55 No 37 50.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 159841478 - NM_006425 SLU7 1 0.08 0.11 7 -9.09 72.18 32 8.51 Yes 42 1.2 Yes 0 0 No -32 0.73 Yes 38 72.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 159842316 - NM_006425 SLU7 1 0.44 0.4 22 1.64 86.41 17 3.93 No 10 0.61 No 0 0 No -28 0.84 Yes 42 77.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 159844249 - NM_006425 SLU7 1 2.64 2.36 60 5.52 82.7 20 5.1 No 73 0.81 Yes 22 0.7 Yes -19 0.5 No 52 66.67 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 159845693 - NM_006425 SLU7 1 0.75 0.71 39 4.96 89.37 23 5.2 No 10 0.59 No 22 0.95 Yes -22 0.96 Yes 48 95.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 3634870 - NM_032444 SLX4 1 4.92 1.04 42 3.69 79.35 32 7.48 Yes 19 1.08 Yes 0 0 No -31 0.75 Yes 39 81.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3649490 - NM_032444 SLX4 1 1.16 0.25 13 4.38 83.1 23 4.5 No 5 0.06 No 0 0 No -22 0.68 Yes 48 47.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 10417798 + NM_001009608 SLX4IP 1 0.6 0.17 9 2.84 0 30 7.59 Yes 2 -1.03 No 0 0 No -29 0.57 No 41 72.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 10430003 + NM_001009608 SLX4IP 1 0.49 0.13 7 8.87 90.8 34 5.74 Yes 21 0.94 Yes 0 0 No -33 0.64 No 37 62.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 10457831 + NM_001009608 SLX4IP 1 0.28 0.15 8 1.9 83.95 32 5.56 Yes 24 1.28 Yes 0 0 No -25 0.7 Yes 45 69.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 10471273 + NM_001009608 SLX4IP 1 0.31 0.1 7 10.17 88.96 70 8.03 Yes 57 2.25 Yes 0 0 No -26 0.53 No 33 60.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 10499402 + NM_001009608 SLX4IP 1 2.4 1.17 42 7.1 86.16 22 6.74 Yes 9 1.36 Yes 0 0 No -21 0.87 Yes 49 89.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 10506292 + NM_001009608 SLX4IP 1 0.34 0.17 10 8.59 92.06 37 7.34 Yes 24 1.42 Yes 0 0 No -36 0.9 Yes 34 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 10513606 + NM_001009608 SLX4IP 1 2.14 1.06 44 6.54 85.4 18 5.38 No 5 0.98 Yes 0 0 No -17 0.56 No 53 80.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 10513611 + NM_001009608 SLX4IP 1 0.96 0.44 24 1.95 0 23 5.83 Yes 10 0.95 Yes 0 0 No -22 0.83 Yes 48 90.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 10537966 + NM_001009608 SLX4IP 1 2.71 1.03 42 6.76 84.19 19 5.55 No 6 0.42 No 0 0 No -26 0.61 No 46 61.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 10538006 + NM_001009608 SLX4IP 1 0.53 0.22 15 0.91 74.8 32 4.81 No 46 0.42 No 0 0 No -31 0.53 No 42 68.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 10541088 + NM_001009608 SLX4IP 1 1.32 0.44 22 9.93 85.38 24 8.5 Yes 11 1.2 Yes 0 0 No -29 0.81 Yes 41 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 10541351 + NM_001009608 SLX4IP 1 0.55 0.25 13 -3.4 0 23 6.26 Yes 63 1.26 Yes 0 0 No -27 0.5 No 43 66.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 10546836 + NM_001009608 SLX4IP 1 1.73 0.56 23 9.74 90.82 30 5.74 Yes 26 0.97 Yes 0 0 No -29 0.8 Yes 41 63.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 10578342 + NM_001009608 SLX4IP 1 11.84 3.58 67 5.93 85.34 24 5.89 Yes 41 0.78 Yes 0 0 No -30 0.75 Yes 40 62.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 10578628 + NM_001009608 SLX4IP 1 0.45 0.15 11 6.48 93.1 27 6.21 Yes 55 1.14 Yes 0 0 No -26 0.84 Yes 44 83.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 10582400 + NM_001009608 SLX4IP 1 0.71 0.25 15 10.65 84.08 29 5.57 Yes 45 0.73 No 0 0 No -26 0.53 No 42 49.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 10582563 + NM_001009608 SLX4IP 1 0.95 0.28 16 8.39 83.67 26 5.66 Yes 75 -4.25 No 0 0 No -26 0.66 No 44 66.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 10601919 + NM_001009608 SLX4IP 1 2.09 0.74 34 9.58 85.14 22 5.82 Yes 9 1.63 Yes 24 0.55 Yes -21 0.65 No 49 84.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 10601958 + NM_001009608 SLX4IP 1 0.5 0.18 11 -3.92 77.96 37 6.19 Yes 48 1.6 Yes 24 0.55 Yes -36 0.56 No 34 78.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 10608439 + NM_001009608 SLX4IP 1 2.19 1.07 41 2.88 73.02 24 6.33 Yes 37 0.92 Yes 0 0 No -27 0.45 No 43 51.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 10608450 + NM_001009608 SLX4IP 1 0.21 0.1 7 0.27 0 21 3.37 No 48 0.91 Yes 0 0 No -20 0.88 Yes 50 73.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 69436090 - NR_029426 SMA4 1 0.33 0.1 7 7.18 78.02 22 5.94 Yes 9 0.21 No 0 0 No -22 0.25 No 46 26.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 45368319 - NM_005901 SMAD2 1 0.13 0.25 11 -1.03 73.85 31 6.64 Yes 18 0.69 No 0 0 No -33 0.77 Yes 37 91.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 45375352 - NM_005901 SMAD2 1 0.18 0.49 21 7.33 85.74 33 6.72 Yes 20 1.7 Yes 0 0 No -32 0.81 Yes 38 88.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 45390473 - NM_005901 SMAD2 1 0.15 0.43 23 3.3 66.87 37 8.51 Yes 24 0.51 No 0 0 No -29 0.7 Yes 41 38.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 45394469 - NM_005901 SMAD2 1 0.24 0.69 30 9.95 92.15 27 4.84 No 40 0.48 No 0 0 No -26 0.8 Yes 44 78.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 45395842 - NM_005901 SMAD2 1 0.16 0.44 22 8.94 82.63 30 6.2 Yes 74 1.3 Yes 38 0.49 Yes -29 0.82 Yes 41 77.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 45400327 - NM_005901 SMAD2 1 0.86 2.46 61 11.86 97.28 32 6.43 Yes 19 1.6 Yes 0 0 No -31 0.8 Yes 39 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 45410336 - NM_005901 SMAD2 1 0.09 0.25 15 7.85 82.25 38 6.26 Yes -2 0.4 No 0 0 No -37 0.46 No 33 71.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 45413266 - NM_005901 SMAD2 1 0.04 0.11 7 -0.4 59.19 59 7.74 Yes 46 0.73 No 0 0 No -58 0.81 Yes 12 93.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 45415463 - NM_005901 SMAD2 1 0.13 0.36 21 10.23 84.39 37 7.13 Yes 41 1.52 Yes 0 0 No -36 0.85 Yes 34 92.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 45446541 - NM_005901 SMAD2 1 5.43 5.31 71 8.28 77.68 24 5.48 No 50 0.32 No 23 0.73 Yes -23 0.73 Yes 47 75.84 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 45449027 - NM_005901 SMAD2 1 0.2 0.21 10 9.07 79.47 30 6.58 Yes 17 1.56 Yes 29 0.85 Yes -29 0.93 Yes 41 89.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 67386362 + NM_005902 SMAD3 1 1.33 0.51 24 11.86 90 27 6.48 Yes 14 0.59 No 0 0 No -26 0.82 Yes 44 82.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 67457254 + NM_005902 SMAD3 1 0.28 0.14 7 4.76 77.64 30 5.46 No NA NA NA 0 0 No -58 0.53 No 12 60.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 67460073 + NM_005902 SMAD3 1 0.48 0.22 14 8.27 82.51 17 5.16 No 70 0.85 Yes 0 0 No -33 0.78 Yes 37 73.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 67466613 + NM_005902 SMAD3 1 0.33 0.15 10 7.4 75.17 49 7.34 Yes 60 2.26 Yes 22 0.87 Yes -23 0.75 Yes 22 80.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 48571256 + NM_005359 SMAD4 1 1.14 0.43 26 7.22 85.67 73 9.01 Yes 60 1.35 Yes 0 0 No -35 0.67 Yes 35 79.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 48577723 + NM_005359 SMAD4 1 0.17 0.17 11 8.22 90.29 19 5 No 6 0.25 No 0 0 No -18 0.83 Yes 52 89.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 48577746 + NM_005359 SMAD4 1 0.15 0.15 9 6.92 83.09 26 4.7 No 29 0.25 No 0 0 No -25 0.72 Yes 45 91.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 48579004 + NM_005359 SMAD4 1 0.59 0.63 32 7.33 85.18 76 6.28 Yes 7 0.44 No 0 0 No -30 0.71 Yes 40 86.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 48591711 + NM_005359 SMAD4 1 1.29 1.11 44 11.91 84.37 15 7.28 Yes 25 0.75 No 0 0 No -35 0.58 No 41 47.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 48603621 + NM_005359 SMAD4 1 1.66 1.14 47 8.93 92.63 27 5.2 No 14 0.64 No 25 0.72 Yes -26 0.7 Yes 44 73.93 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 48603676 + NM_005359 SMAD4 1 3.38 2.25 63 4.86 93.97 22 6.38 Yes 9 1.28 Yes 0 0 No -21 0.65 No 49 75.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 135483524 + NM_001001419 SMAD5 1 2.17 0.92 43 0.25 0 18 5.51 No 5 0.49 No 0 0 No -26 0.85 Yes 44 90.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 135496713 + NM_001001419 SMAD5 1 0.48 0.51 28 10.07 81.13 32 5.55 No 70 -1.19 No 0 0 No -26 0.41 No 42 44.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 135508916 + NM_001001419 SMAD5 1 0.72 0.33 18 7.77 84.37 28 4.84 No 51 0.98 Yes 0 0 No -28 0.66 Yes 42 62.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 46468926 - NM_001190821 SMAD7 1 1251.25 33.51 72 7.48 79.87 32 6.44 Yes 64 -1.73 No 31 0.75 Yes -31 0.89 Yes 39 93.7 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 71408977 + NM_021940 SMAP1 1 6.02 3.1 67 9.46 88.16 25 5.1 No 27 0.93 Yes 0 0 No -25 0.49 No 47 45.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 71457787 + NM_021940 SMAP1 1 0.31 0.35 21 8.15 87.64 31 6.04 Yes 18 0.09 No 0 0 No -30 0.49 No 45 45.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 71457790 + NM_021940 SMAP1 1 0.14 0.17 9 7.39 89.41 34 6.28 Yes 21 0.09 No 0 0 No -33 0.39 No 42 44.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 71460665 + NM_021940 SMAP1 1 0.1 0.13 8 4.39 85.15 32 5.74 Yes 57 -5.63 No 0 0 No -31 0.8 Yes 39 61.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 71469530 + NM_021940 SMAP1 1 0.34 0.26 15 3.56 68.57 41 7.03 Yes 1 0.39 No 28 0.38 Yes -28 0.69 Yes 42 58.52 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 71483045 + NM_021940 SMAP1 1 0.22 0.19 12 -9.23 0 10 3.28 No 15 1.18 Yes 29 0.39 Yes -34 0.39 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 71501391 + NM_021940 SMAP1 1 25.77 18.17 72 8.93 83.97 52 8.92 Yes 10 1.83 Yes 22 0.83 Yes -51 0.9 Yes 19 92.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 71508363 + NM_021940 SMAP1 1 0.18 0.11 7 -3.23 0 35 4.81 No 31 -3.01 No 0 0 No -29 0.93 Yes 41 94.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 71515474 + NM_021940 SMAP1 1 0.17 0.15 9 7.35 89.75 24 4.9 No 46 1.69 Yes 0 0 No -23 0.83 Yes 47 79.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 71546649 + NM_021940 SMAP1 1 0.26 0.28 17 -1.57 0 16 3.87 No 39 0.33 No 0 0 No -31 0.71 Yes 39 79.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 71547483 + NM_021940 SMAP1 1 0.15 0.17 12 8.7 84.73 25 6.07 Yes 12 0.5 No 24 0.57 Yes -24 0.8 Yes 46 87.6 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 71547642 + NM_021940 SMAP1 1 0.12 0.13 8 9.09 86.2 22 5.64 Yes 9 1.04 Yes 0 0 No -26 0.55 No 44 61.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 71569031 + NM_021940 SMAP1 1 1.11 0.71 31 8.42 88.31 21 5.65 Yes 8 0.37 No 20 0.6 Yes -20 0.87 Yes 50 84.59 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 40879242 + NM_001198980 SMAP2 1 0.08 0.24 13 12.66 96.38 27 5.39 No 46 1 Yes 0 0 No -26 0.48 No 48 38.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 2016041 + NM_001289397 SMARCA2 1 1.04 2.32 55 7.54 83.63 29 7.42 Yes NA NA NA 0 0 No -28 0.71 Yes 42 61.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 2033965 + NM_001289397 SMARCA2 1 0.49 1.33 51 4.98 79.21 54 5.86 Yes 41 1.31 Yes 0 0 No -33 0.41 No 48 70.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 2041330 + NM_001289397 SMARCA2 1 16 4.85 69 6.6 92.33 26 4.68 No 26 0.14 No 0 0 No -26 0.74 Yes 44 75.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 2047112 + NM_001289397 SMARCA2 1 0.5 0.18 12 13.64 93.36 85 11.98 Yes 72 1.91 Yes 0 0 No -43 0.58 No 34 60.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 2064119 + NM_001289397 SMARCA2 1 0.09 0.21 10 3.68 0 20 4.46 No 56 0.95 Yes 0 0 No -19 0.81 Yes 51 87.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 2068943 + NM_001289397 SMARCA2 1 0.06 0.11 7 -1.01 0 9 3.87 No 16 1.35 Yes 0 0 No -33 0.63 No 37 73.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 2070420 + NM_001289397 SMARCA2 1 0.16 0.32 20 0.97 80.75 28 7.14 Yes 15 0.24 No 0 0 No -30 0.83 Yes 40 89.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 2072031 + NM_001289397 SMARCA2 1 0.34 1.21 46 6.59 83.01 25 7.09 Yes 12 1.19 Yes 0 0 No -24 0.82 Yes 46 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 2073212 + NM_001289397 SMARCA2 1 0.04 0.13 9 -13.11 0 25 5.15 No 12 1.15 Yes 0 0 No -24 0.77 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 2077633 + NM_001289397 SMARCA2 1 0.05 0.15 9 5.08 0 30 8.48 Yes 17 1.05 Yes 0 0 No -29 0.85 Yes 41 86.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 2079905 + NM_001289397 SMARCA2 1 0.05 0.14 8 5.99 73.79 33 4.48 No 20 1.03 Yes 0 0 No -32 0.71 Yes 38 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 2170418 + NM_001289397 SMARCA2 1 23.96 58.75 72 10.44 87.04 30 5.57 Yes 17 1.73 Yes 29 0.91 Yes -29 0.85 Yes 41 81.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 2181575 + NM_001289397 SMARCA2 1 0.06 0.13 8 1.84 0 50 7.16 Yes 6 0.92 Yes 0 0 No -42 0.66 No 28 70.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 2188854 + NM_001289397 SMARCA2 1 0.1 0.22 12 7.84 82.26 19 3.91 No 28 0.7 No 0 0 No -28 0.93 Yes 42 93.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 11098286 + NM_001128845 SMARCA4 1 0.15 0.14 9 5.46 88.79 20 4.8 No 7 0.57 No 0 0 No -19 0.91 Yes 51 78.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 11107172 + NM_001128845 SMARCA4 1 0.73 1.01 43 3.24 82.21 27 6.4 Yes 14 2.23 Yes 0 0 No -26 0.96 Yes 44 94.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11124143 + NM_001128845 SMARCA4 1 0.07 0.13 9 8.67 83.96 47 6.39 Yes 34 1.58 Yes 0 0 No -28 0.49 No 42 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 11132125 + NM_001128845 SMARCA4 1 0.21 0.43 21 9.3 87.32 19 5.57 Yes 6 -1.04 No 0 0 No -24 0.78 Yes 46 68.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 11138407 + NM_001128845 SMARCA4 1 0.08 0.17 12 9.75 90.87 13 5.52 No 76 1.39 Yes 0 0 No -24 0.84 Yes 46 74.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11144442 + NM_001128845 SMARCA4 1 9.67 12.76 72 8.83 88.45 22 5.2 No 9 0.92 Yes 21 0.9 Yes -21 0.79 Yes 49 84.13 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 11145534 + NM_001128845 SMARCA4 1 0.13 0.21 12 7.41 77.41 24 6.4 Yes 11 0.78 Yes 0 0 No -23 0.78 Yes 47 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11150133 + NM_001128845 SMARCA4 1 15.06 6.43 71 5.32 75.65 28 5.26 No 15 0.24 No 27 0.8 Yes -27 0.71 Yes 43 68.75 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 11151982 + NM_001128845 SMARCA4 1 267.77 115.28 72 2.9 79.38 45 9.22 Yes -3 0.83 Yes 35 0.1 Yes -24 0.48 No 38 76.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 11168933 + NM_001128845 SMARCA4 1 49.88 51.22 72 3.19 76.83 28 5.66 Yes 15 0.04 No 24 0.83 Yes -25 0.73 Yes 43 66.01 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 11169361 + NM_001128845 SMARCA4 1 0.06 0.11 7 6.08 77.71 34 5.97 Yes 51 0.38 No 0 0 No -29 0.73 Yes 41 59.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 11170455 + NM_001128845 SMARCA4 1 0.18 0.31 20 6.22 83.45 21 5.1 No 38 0.37 No 0 0 No -23 0.69 Yes 47 66.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 144445495 + NM_003601 SMARCA5 1 0.07 0.4 16 0.14 64.66 24 4.24 No 66 0.05 No 31 0.8 Yes -26 0.27 No 51 24.97 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 144455321 + NM_003601 SMARCA5 1 0.09 0.49 24 7.66 87.64 27 4.22 No 30 1.04 Yes 0 0 No -27 0.66 No 43 68.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 144464753 + NM_003601 SMARCA5 1 0.05 0.18 13 7.29 84.4 22 5.66 Yes 65 -4.7 No 20 0.53 Yes -22 0.66 No 51 50.83 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 144471193 + NM_003601 SMARCA5 1 0.08 0.4 23 0.63 70.25 26 5.25 No 5 0.35 No 0 0 No -25 0.63 No 45 77.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 144474237 + NM_003601 SMARCA5 1 0.1 0.33 14 4.11 70.08 35 4.97 No 65 1.09 Yes 27 0.64 Yes -24 0.51 No 46 64.78 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 144474249 + NM_003601 SMARCA5 1 0.09 0.31 16 -3.06 0 20 4.58 No 34 0.69 No 27 0.64 Yes -36 0.49 No 34 79.85 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr4 95128991 + NM_001128430 SMARCAD1 1 0.27 0.14 8 5.67 80.68 31 7.48 Yes 18 1.57 Yes 34 0.7 Yes -30 0.77 Yes 40 80.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 95134185 + NM_001128430 SMARCAD1 1 1.64 2.03 58 -3.92 0 44 7.31 Yes 41 0.83 Yes 43 0.6 Yes -43 0.95 Yes 27 97.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 95134888 + NM_001128430 SMARCAD1 1 0.2 0.26 15 7.92 79.35 26 5.88 Yes 13 0.55 No 0 0 No -21 0.4 No 49 63.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 95147272 + NM_001128430 SMARCAD1 1 0.67 0.75 41 0.87 77.03 36 7.07 Yes 49 0.99 Yes 0 0 No -35 0.93 Yes 35 92.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 95162095 + NM_001128430 SMARCAD1 1 0.15 0.17 10 8.09 90.76 15 5.38 No 50 0.01 No 0 0 No -20 0.47 No 45 27.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 95164148 + NM_001128430 SMARCAD1 1 1.26 1.19 45 3.51 0 37 4.48 No 21 0.02 No 0 0 No -33 0.44 No 34 48.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 95171812 + NM_001128430 SMARCAD1 1 0.43 0.58 30 10.27 96.39 27 5.43 No 4 0.21 No 0 0 No -23 0.6 No 47 60.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 95187212 + NM_001128430 SMARCAD1 1 1.66 1.67 52 12.19 84.4 35 5.51 No 16 0.48 No 0 0 No -29 0.38 No 42 47.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 95187281 + NM_001128430 SMARCAD1 1 0.13 0.13 9 6.99 78.38 30 5.06 No 28 -0.22 No 0 0 No -27 0.62 No 41 69.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 95187898 + NM_001128430 SMARCAD1 1 0.19 0.21 12 9.75 90.26 32 7.42 Yes 19 1.23 Yes 0 0 No -31 0.53 No 39 71.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 95200079 + NM_001128430 SMARCAD1 1 127.44 63.76 72 1.8 0 9 3.87 No 11 0.02 No 24 0.77 Yes -30 0.46 No 40 64.44 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 95206112 + NM_001128430 SMARCAD1 1 0.17 0.28 17 0.9 83.95 34 6.63 Yes 21 1.05 Yes 0 0 No -33 0.54 No 37 72.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 95206115 + NM_001128430 SMARCAD1 1 0.08 0.13 8 -5.77 0 37 6.85 Yes 24 1.06 Yes 0 0 No -36 0.56 No 34 69.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 95208995 + NM_001128430 SMARCAD1 1 0.12 0.18 10 6.78 95.65 142 10.26 Yes 74 0.92 Yes 0 0 No -26 0.86 Yes 44 89.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 217278724 + NM_014140 SMARCAL1 1 1.92 1.21 35 3.56 77.47 80 7.46 Yes 67 0.99 Yes 0 0 No -25 0.69 Yes 45 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 217292679 + NM_014140 SMARCAL1 1 0.35 0.28 16 6.7 83.43 22 4.69 No 9 0.85 Yes 0 0 No -21 0.62 No 49 81.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 217311384 + NM_014140 SMARCAL1 1 1.48 0.74 34 7.72 85.81 28 5.57 Yes 15 1.04 Yes 27 0.89 Yes -27 0.87 Yes 43 93.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 217318669 + NM_014140 SMARCAL1 1 0.18 0.13 7 9.99 88.99 27 5.19 No -2 0.79 Yes 0 0 No -26 0.58 No 44 82.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 24138164 + NM_001007468 SMARCB1 1 0.08 0.24 16 6.8 80.12 22 8.06 Yes 9 1.28 Yes 0 0 No -21 0.89 Yes 49 90.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24158811 + NM_001007468 SMARCB1 1 0.08 0.28 14 9.69 82.32 26 6 Yes 13 0.61 No 0 0 No -25 0.95 Yes 45 93.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 24160525 + NM_001007468 SMARCB1 1 0.06 0.15 10 7.06 84.32 21 7.21 Yes 8 1.27 Yes 0 0 No -20 0.89 Yes 50 92.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24175778 + NM_001007468 SMARCB1 1 0.09 0.39 24 4.56 80.26 19 5 No 28 1.68 Yes 0 0 No -40 0.76 Yes 48 56.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47647467 - NM_003074 SMARCC1 1 0.05 0.11 7 7.75 91.78 36 6.42 Yes 23 1.17 Yes 0 0 No -40 0.73 Yes 30 91.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47647913 - NM_003074 SMARCC1 1 0.04 0.1 7 10.09 87.15 41 8.82 Yes 28 1.9 Yes 0 0 No -26 0.76 Yes 48 66.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47672386 - NM_003074 SMARCC1 1 0.24 0.76 43 4.97 74.24 20 5.55 No 61 1 Yes 0 0 No -24 0.69 Yes 51 73.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47676832 - NM_003074 SMARCC1 1 2.07 6.07 72 0.98 70.16 27 5.39 No 1 1.13 Yes 0 0 No -26 0.74 Yes 44 84.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47680268 - NM_003074 SMARCC1 1 0.27 0.74 38 -1.02 78.91 20 6.16 Yes 46 0.67 No 0 0 No -29 0.34 No 45 54.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47684369 - NM_003074 SMARCC1 1 0.07 0.21 12 8.34 86.79 34 8.06 Yes 21 1.69 Yes 0 0 No -33 0.95 Yes 37 96.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47700227 - NM_003074 SMARCC1 1 0.8 2.13 60 6.62 82.49 26 5.36 No 52 0.06 No 0 0 No -25 0.96 Yes 45 97.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 47702944 - NM_003074 SMARCC1 1 0.04 0.1 7 -0.85 76.49 35 6.35 Yes 44 0.82 Yes 0 0 No -32 0.81 Yes 38 75.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47702944 - NM_003074 SMARCC1 1 0.07 0.18 11 -0.85 76.49 35 6.35 Yes 44 0.82 Yes 0 0 No -32 0.81 Yes 38 75.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47717061 - NM_003074 SMARCC1 1 0.26 0.65 32 5.86 79.69 25 5.12 No 36 1.69 Yes 0 0 No -24 0.74 Yes 46 65.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47719800 - NM_003074 SMARCC1 1 0.03 0.13 7 -9.56 0 27 6.2 Yes 46 0.9 Yes 0 0 No -26 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47743301 - NM_003074 SMARCC1 1 0.06 0.18 9 6.74 67.24 50 7.95 Yes 37 1.13 Yes 0 0 No -35 0.57 No 35 66.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47748017 - NM_003074 SMARCC1 1 0.74 3.08 70 1.28 0 33 6.56 Yes 20 1.58 Yes 0 0 No -26 0.83 Yes 44 88.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47749197 - NM_003074 SMARCC1 1 0.43 1.76 61 9.08 86.91 25 6 Yes 12 1.83 Yes 0 0 No -24 0.8 Yes 46 93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47750584 - NM_003074 SMARCC1 1 0.04 0.18 12 3.47 84.37 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.64 No 51 75.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 47759602 - NM_003074 SMARCC1 1 0.34 1.18 47 4.36 84.95 27 5.29 No 56 0.81 Yes 0 0 No -26 0.71 Yes 44 62.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47759921 - NM_003074 SMARCC1 1 0.22 0.69 34 11.04 93.04 35 5.84 Yes -1 0.46 No 0 0 No -23 0.66 No 47 81.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 47761537 - NM_003074 SMARCC1 1 0.38 1.28 50 7.82 83.92 23 6.15 Yes 10 1.46 Yes 0 0 No -22 0.85 Yes 48 90.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47762223 - NM_003074 SMARCC1 1 1.95 7.61 72 3.32 78.16 28 5.67 Yes 15 0.63 No 0 0 No -27 0.54 No 43 60.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47762987 - NM_003074 SMARCC1 1 0.19 0.78 31 6.34 84.47 28 5.38 No 75 1.05 Yes 0 0 No -27 0.77 Yes 43 85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47770392 - NM_003074 SMARCC1 1 0.12 0.44 22 8.39 83.96 36 6.24 Yes 23 1.78 Yes 0 0 No -32 0.53 No 35 55.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 47772188 - NM_003074 SMARCC1 1 0.29 0.94 44 6.7 80.12 21 7.21 Yes 8 1.21 Yes 0 0 No -20 0.81 Yes 50 87.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47772981 - NM_003074 SMARCC1 1 0.06 0.17 11 5.03 77.84 23 4.73 No 31 -2.72 No 0 0 No -23 0.33 No 48 50.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47777363 - NM_003074 SMARCC1 1 0.09 0.31 17 11.53 88.27 27 5.74 Yes 63 1.14 Yes 0 0 No -26 0.76 Yes 44 75.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47787910 - NM_003074 SMARCC1 1 0.28 0.57 26 6.91 86.68 15 4.93 No 2 1.32 Yes 20 0.77 Yes -26 0.32 No 44 51.87 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 47787930 - NM_003074 SMARCC1 1 0.18 0.43 20 0.1 0 37 5.17 No 24 0.39 No 20 0.77 Yes -36 0.54 No 34 64.57 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 47794114 - NM_003074 SMARCC1 1 0.07 0.15 11 7.79 80.7 24 7.41 Yes 11 1.12 Yes 0 0 No -23 0.93 Yes 47 92.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47798572 - NM_003074 SMARCC1 1 0.16 0.38 20 10.29 86.62 22 7.21 Yes 9 0.45 No 0 0 No -21 0.63 No 49 60.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 47800331 - NM_003074 SMARCC1 1 0.32 0.72 9 5.41 89.21 29 7.72 Yes 16 1.27 Yes 0 0 No -28 0.93 Yes 42 95.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 47807149 - NM_003074 SMARCC1 1 0.43 1.03 44 6.75 78.28 30 7.39 Yes 22 1 Yes 0 0 No -29 0.67 Yes 46 63.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 47814056 - NM_003074 SMARCC1 1 0.72 1.67 48 6.45 82.63 23 5.97 Yes 10 0.99 Yes 0 0 No -22 0.86 Yes 48 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56561105 - NM_003075 SMARCC2 1 0.18 0.28 17 5.5 90.92 28 5.29 No 53 0.97 Yes 0 0 No -27 0.4 No 13 50.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56563991 - NM_003075 SMARCC2 1 0.06 0.1 7 -1.96 69.45 40 7.87 Yes 27 0.91 Yes 0 0 No -39 0.77 Yes 31 87.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56566486 - NM_003075 SMARCC2 1 9.28 14.4 72 3.54 68.73 30 7.93 Yes 17 1.89 Yes 0 0 No -29 0.91 Yes 41 91.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56566814 - NM_003075 SMARCC2 1 20.66 31.6 72 5.98 88.21 22 4.69 No 9 1.09 Yes 21 0.8 Yes -21 0.86 Yes 49 83.46 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 56572334 - NM_003075 SMARCC2 1 0.08 0.13 7 -3.37 0 13 4.36 No 73 0.75 No 20 0.79 Yes -12 0.3 No 58 47.14 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 56577713 - NM_003075 SMARCC2 1 0.2 0.43 25 0.07 78.8 34 6.7 Yes 21 0.4 No 0 0 No -33 0.93 Yes 37 93.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56578877 - NM_003075 SMARCC2 1 0.12 0.21 12 3.33 81.18 25 5.03 No 62 1.83 Yes 24 0.96 Yes -24 0.73 Yes 46 86.47 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 50483622 + NM_003076 SMARCD1 1 0.6 1.17 46 7.78 78.4 27 5.29 No 69 1.36 Yes 0 0 No -24 0.67 Yes 44 64.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 50483674 + NM_003076 SMARCD1 1 0.06 0.14 8 0.16 0 17 3.82 No 14 1.97 Yes 0 0 No -26 0.87 Yes 44 93.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 50483708 + NM_003076 SMARCD1 1 0.08 0.17 11 1.95 81.68 21 2.93 No 48 1.95 Yes 0 0 No -60 0.48 No 46 30.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 50489130 + NM_003076 SMARCD1 1 0.14 0.31 19 4.93 84.41 25 6.73 Yes 12 1.32 Yes 0 0 No -24 0.65 No 46 84.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 50490978 + NM_003076 SMARCD1 1 0.31 0.5 23 7.44 90.9 44 5.74 Yes 20 0.96 Yes 0 0 No -32 0.87 Yes 38 94.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 61910804 - NM_001098426 SMARCD2 1 0.1 0.31 13 -0.92 71.79 17 4.8 No 19 -1.54 No 19 0.97 Yes -21 0.75 Yes 49 44.14 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 61911957 - NM_001098426 SMARCD2 1 0.88 1.42 50 0.02 63.41 24 6.56 Yes 11 1.33 Yes 26 0.88 Yes -23 0.89 Yes 47 92.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 61912926 - NM_001098426 SMARCD2 1 0.04 0.1 7 -14.71 0 22 5.91 Yes 9 0.93 Yes 0 0 No -21 0.75 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 61914938 - NM_001098426 SMARCD2 1 0.87 0.25 15 7.88 83.72 35 6.16 Yes 69 1.89 Yes 0 0 No -34 0.38 No 55 38.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38785244 - NM_003079 SMARCE1 1 0.03 0.1 7 -7.38 67.89 27 5.31 No 33 0.28 No 0 0 No -26 0.8 Yes 44 81.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 38785266 - NM_003079 SMARCE1 1 0.07 0.22 13 3.02 71.1 33 5.47 No 11 0.3 No 24 0.97 Yes -27 0.52 No 43 53.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 38785821 - NM_003079 SMARCE1 1 0.07 0.25 15 10.21 96.61 28 5.79 Yes 8 1.18 Yes 27 0.86 Yes -27 0.65 No 43 54.18 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 38786539 - NM_003079 SMARCE1 1 2.32 8.19 72 9.41 87.24 28 6.32 Yes 15 0.94 Yes 0 0 No -27 0.87 Yes 43 81.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38787964 - NM_003079 SMARCE1 1 0.12 0.33 15 -4.24 57.7 24 4.61 No 44 -4.63 No 0 0 No -23 0.39 No 47 21.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 38796331 - NM_003079 SMARCE1 1 0.34 1 46 5.89 80.69 32 4.14 No 2 0.54 No 25 0.89 Yes -25 0.87 Yes 45 80.32 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 38801870 - NM_003079 SMARCE1 1 0.14 0.35 16 -20.51 0 33 4.88 No 28 0.39 No 0 0 No -32 0.84 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 38801871 - NM_003079 SMARCE1 1 0.1 0.24 14 -14.8 0 32 4.8 No 27 0.4 No 0 0 No -31 0.85 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 53408038 - NM_006306 SMC1A 1 0.04 0.18 11 7.01 77.53 52 8.46 Yes 39 0.39 No 20 0.91 Yes -31 0.35 No 19 60.15 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 53423319 - NM_006306 SMC1A 1 0.05 0.17 10 2.14 67.46 20 5.1 No 58 -4.36 No 24 0.97 Yes -21 0.63 No 51 38.27 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 53429039 - NM_006306 SMC1A 1 0.09 0.22 12 9.69 94.81 26 5.25 No 63 0.52 No 0 0 No -25 0.67 Yes 45 65.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 53429302 - NM_006306 SMC1A 1 0.1 0.19 9 7.72 79.68 26 6.31 Yes 13 1.03 Yes 0 0 No -25 0.63 No 45 66.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 53430601 - NM_006306 SMC1A 1 0.05 0.13 8 0.54 0 40 6.42 Yes 27 0.61 No 0 0 No -39 0.76 Yes 31 67.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 53432105 - NM_006306 SMC1A 1 0.05 0.14 9 3.9 69.67 22 5.25 No 19 0.55 No 32 0.79 Yes -21 0.61 No 49 62.95 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 53434407 - NM_006306 SMC1A 1 0.09 0.28 14 6.06 80.2 41 5.63 Yes 11 0.59 No 0 0 No -23 0.86 Yes 47 77.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 53448991 - NM_006306 SMC1A 1 1.5 4.17 70 8.38 85.73 22 7.14 Yes 69 0.77 Yes 25 0.96 Yes -22 0.46 No 49 51.12 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 106857562 + NM_001042550 SMC2 1 1.17 0.32 18 6.25 86.27 45 7.36 Yes 32 0.95 Yes 27 0.89 Yes -39 0.51 No 31 70.43 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 106857579 + NM_001042550 SMC2 1 1.35 0.31 16 6.1 77.29 25 4.9 No 49 0.94 Yes 27 0.89 Yes -24 0.43 No 46 53.39 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 106858291 + NM_001042550 SMC2 1 0.34 0.58 30 8.38 92.78 24 6.3 Yes 66 -2.53 No 0 0 No -23 0.65 No 47 71.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 106884500 + NM_001042550 SMC2 1 0.23 0.53 26 7.38 90.98 28 4.96 No 24 0.66 No 0 0 No -27 0.81 Yes 43 70.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 106886686 + NM_001042550 SMC2 1 0.09 0.21 14 11.38 93.74 23 7.06 Yes 10 2.41 Yes 0 0 No -22 0.83 Yes 48 90.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 106898128 + NM_001042550 SMC2 1 1.56 2.94 65 3.09 78.71 25 5.39 No 12 1.08 Yes 23 0.77 Yes -24 0.87 Yes 46 95.1 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 106898148 + NM_001042550 SMC2 1 1.04 2.21 56 3.67 80.68 24 5.13 No 32 1.09 Yes 23 0.77 Yes -23 0.56 No 47 23.43 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 106900375 + NM_001042550 SMC2 1 2.43 4.82 69 -1.11 0 56 8.8 Yes 43 1.08 Yes 0 0 No -34 0.28 No 15 79.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 106903681 + NM_001042550 SMC2 1 0.5 0.79 31 5.93 88.71 31 5.91 Yes 18 1.3 Yes 0 0 No -30 0.8 Yes 40 90.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 112343574 + NM_005445 SMC3 1 0.07 0.14 8 -2.17 61.44 25 5.74 Yes 52 0.75 No 30 0.61 Yes -24 0.56 No 34 23.08 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 112357894 + NM_005445 SMC3 1 0.06 0.14 9 -6.63 0 11 4.12 No 7 0.19 No 21 0.2 Yes -10 0.51 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 160119777 + NM_005496 SMC4 1 4.47 6.75 72 8.57 80.38 29 5.66 Yes 16 0.34 No 28 0.79 Yes -28 0.66 Yes 42 58.35 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 160122165 + NM_005496 SMC4 1 0.63 2.33 55 3.94 86.47 23 5.17 No 10 1.25 Yes 22 0.97 Yes -22 0.86 Yes 48 94.61 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 160130121 + NM_005496 SMC4 1 0.06 0.19 11 -0.05 0 15 4.12 No 69 0.89 Yes 26 0.81 Yes -34 0.85 Yes 36 86.46 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 160130317 + NM_005496 SMC4 1 0.04 0.11 8 6.38 83.56 26 4.6 No 20 0.49 No 21 0.82 Yes -21 0.58 No 45 65.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 160131273 + NM_005496 SMC4 1 0.04 0.13 9 -3.19 0 12 3.85 No 31 0.36 No 0 0 No -43 0.91 Yes 27 89.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 160130317 + NM_005496 SMC4 1 0.19 0.65 34 6.38 83.56 26 4.6 No 20 0.49 No 21 0.82 Yes -21 0.58 No 45 65.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 160130401 + NM_005496 SMC4 1 0.13 0.4 21 2.5 77.35 17 5.29 No 37 0.66 No 0 0 No -21 0.66 No 49 62.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 160135661 + NM_005496 SMC4 1 0.04 0.17 9 -0.53 0 19 4.58 No 57 0.19 No 0 0 No -18 0.75 Yes 52 56.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 160135872 + NM_005496 SMC4 1 0.12 0.33 18 2.2 67.99 41 5.42 No 21 0.32 No 0 0 No -30 0.31 No 30 45.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 160145004 + NM_005496 SMC4 1 0.07 0.22 13 -8.49 43.56 25 4.88 No 56 0.4 No 0 0 No -24 0.77 Yes 16 14.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 160145015 + NM_005496 SMC4 1 0.25 0.82 36 2.85 0 15 4.47 No 67 0.4 No 0 0 No -21 0.39 No 49 48.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 160146518 + NM_005496 SMC4 1 0.06 0.19 13 -0.92 51.39 24 4.61 No 24 0.75 No 24 0.36 Yes -36 0.45 No 34 38.17 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 160148799 + NM_005496 SMC4 1 0.15 0.57 24 1.09 65.47 29 5.78 Yes 44 1.16 Yes 22 0.85 Yes -28 0.61 No 42 71.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 160148802 + NM_005496 SMC4 1 0.05 0.21 13 2.03 81.34 32 5.91 Yes 47 1.17 Yes 22 0.85 Yes -31 0.54 No 39 66.82 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 160150074 + NM_005496 SMC4 1 0.03 0.14 7 -3.94 0 37 6.27 Yes 4 0.59 No 0 0 No -36 0.73 Yes 34 66.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 72875843 + NM_015110 SMC5 1 0.15 0.17 11 6.69 80.84 23 7.13 Yes 10 1.54 Yes 0 0 No -22 0.89 Yes 48 93.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 72876614 + NM_015110 SMC5 1 0.25 0.29 17 6.45 76.34 33 5.65 Yes 76 -6.17 No 0 0 No -25 0.58 No 45 68.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 72877995 + NM_015110 SMC5 1 0.21 0.26 15 5.69 78.06 35 7.14 Yes 22 1.74 Yes 0 0 No -34 0.98 Yes 36 97.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 72891534 + NM_015110 SMC5 1 0.16 0.22 11 3.19 77.97 23 4.66 No 10 0.12 No 0 0 No -22 0.84 Yes 48 80.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 72891584 + NM_015110 SMC5 1 0.32 0.38 19 2.45 73.13 49 5.47 No 22 0.78 Yes 0 0 No -38 0.58 No 33 69.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 72899826 + NM_015110 SMC5 1 0.09 0.11 8 9.69 100 22 7.19 Yes 67 1.14 Yes 0 0 No -30 0.73 Yes 40 59.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 72901661 + NM_015110 SMC5 1 2.11 2.01 59 4.19 0 48 7.35 Yes 35 0.28 No 0 0 No -48 0.66 No 22 67.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 72916945 + NM_015110 SMC5 1 0.12 0.18 11 4.49 64.79 33 6.93 Yes 20 0.55 No 0 0 No -32 0.54 No 38 74.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 72934415 + NM_015110 SMC5 1 0.47 0.44 25 -1.87 0 10 4 No 40 -1.83 No 0 0 No -23 0.73 Yes 47 77.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 72938387 + NM_015110 SMC5 1 0.16 0.15 11 -0.31 0 19 5.62 Yes 6 1.36 Yes 29 0.8 Yes -24 0.62 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 72942084 + NM_015110 SMC5 1 0.1 0.13 8 1.37 77.8 28 5.08 No 8 0.63 No 0 0 No -27 0.73 Yes 43 76.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 72960719 + NM_015110 SMC5 1 0.21 0.1 7 9.37 83.29 14 5.37 No 1 1.91 Yes 0 0 No -25 0.55 No 45 46.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 72961485 + NM_015110 SMC5 1 1.6 0.78 37 1.03 0 21 5.82 Yes 8 1.97 Yes 30 0.29 Yes -20 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 72961494 + NM_015110 SMC5 1 8.16 3.88 71 0.87 0 30 6.54 Yes 17 1.95 Yes 30 0.29 Yes -29 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 72961496 + NM_015110 SMC5 1 1.56 0.71 34 -4.95 0 32 6.69 Yes 19 1.96 Yes 30 0.29 Yes -31 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 72963724 + NM_015110 SMC5 1 0.22 0.17 11 3.25 83.1 20 5.5 No 47 1.11 Yes 0 0 No -19 0.59 No 51 70.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 72966440 + NM_015110 SMC5 1 0.36 0.47 21 8.62 85.56 14 5 No 47 1.06 Yes 0 0 No -26 0.79 Yes 44 56.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 17851876 - NM_001142286 SMC6 1 0.17 0.24 14 5.92 78.19 23 5.73 Yes 75 1.57 Yes 35 0.6 Yes -22 0.69 Yes 48 64.17 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 17856803 - NM_001142286 SMC6 1 0.42 0.54 30 3.4 84.51 18 4.99 No 69 0.54 No 0 0 No -25 0.33 No 45 37.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 17856841 - NM_001142286 SMC6 1 0.29 0.43 18 -2.35 56.98 18 4.68 No 31 0.54 No 0 0 No -40 0.45 No 31 54.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 17863367 - NM_001142286 SMC6 1 0.17 0.29 15 9.66 79.25 38 7.05 Yes 25 0.58 No 0 0 No -37 0.58 No 49 49.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 17876178 - NM_001142286 SMC6 1 0.12 0.21 12 5.7 72.7 78 9.18 Yes 65 1.81 Yes 0 0 No -27 0.89 Yes 43 85.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 17881642 - NM_001142286 SMC6 1 0.12 0.22 13 -3.68 0 33 7.03 Yes 70 0.52 No 0 0 No -32 0.65 No 38 73.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 17886828 - NM_001142286 SMC6 1 0.16 0.24 15 3.67 0 33 6.92 Yes 71 0.15 No 0 0 No -32 0.9 Yes 38 95.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 17889103 - NM_001142286 SMC6 1 0.18 0.19 11 10.42 95.76 27 4.96 No 9 1.54 Yes 0 0 No -26 0.5 No 44 79.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 17890019 - NM_001142286 SMC6 1 0.1 0.15 8 -0.27 78.61 28 5.64 Yes 20 1.27 Yes 0 0 No -32 0.53 No 38 69.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 17891541 - NM_001142286 SMC6 1 0.27 0.39 20 11.23 92.08 31 6.4 Yes 18 1.48 Yes 0 0 No -30 0.58 No 40 74.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 17894848 - NM_001142286 SMC6 1 3.42 4.71 70 7.19 76.45 15 5.74 Yes 2 1.02 Yes 20 0.35 Yes -20 0.47 No 50 49.73 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 17899486 - NM_001142286 SMC6 1 0.37 0.56 28 -2.48 0 23 6.99 Yes 10 1.12 Yes 0 0 No -26 0.81 Yes 44 80.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 17907724 - NM_001142286 SMC6 1 0.13 0.15 10 -3.35 64.26 16 4.69 No 76 1.1 Yes 0 0 No -38 0.85 Yes 32 81.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 17913799 - NM_001142286 SMC6 1 0.22 0.26 16 6.53 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.76 Yes 51 90.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 17922090 - NM_001142286 SMC6 1 1.57 2.01 58 5.63 87.07 27 5.2 No 14 -0.14 No 26 0.87 Yes -26 0.72 Yes 44 50.79 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr18 2668060 + NM_015295 SMCHD1 1 0.19 0.4 20 3.6 85.02 17 6.63 Yes 4 1.2 Yes 0 0 No -29 0.59 No 54 63.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 2673015 + NM_015295 SMCHD1 1 0.56 1.19 47 9.85 78.24 56 6.44 Yes 10 0.41 No 0 0 No -23 0.86 Yes 47 77.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2690663 + NM_015295 SMCHD1 1 0.71 1.31 52 10.18 85.86 29 7.75 Yes 16 1.68 Yes 0 0 No -28 0.92 Yes 42 95.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 2699102 + NM_015295 SMCHD1 1 0.65 0.79 32 8.01 88.66 22 5.29 No 35 0.73 No 0 0 No -25 0.69 Yes 49 77.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2701178 + NM_015295 SMCHD1 1 0.22 0.38 23 7.47 85.05 31 5.81 Yes 18 0.36 No 0 0 No -30 0.95 Yes 40 96.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2703818 + NM_015295 SMCHD1 1 0.08 0.13 7 5.42 73.68 31 5.49 No 5 1.45 Yes 0 0 No -25 0.53 No 45 76.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 2718314 + NM_015295 SMCHD1 1 0.09 0.15 10 -10.03 0 36 8.62 Yes 23 1.61 Yes 0 0 No -23 0.43 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 2724284 + NM_015295 SMCHD1 1 0.09 0.19 12 9.03 88.57 45 6.4 Yes 32 0.6 No 0 0 No -30 0.73 Yes 40 68.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 2729279 + NM_015295 SMCHD1 1 0.06 0.15 11 3.02 0 14 3.99 No 20 0.73 No 0 0 No -32 0.87 Yes 38 96.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2731658 + NM_015295 SMCHD1 1 0.21 0.36 19 3.92 68.66 40 6.56 Yes 46 1.11 Yes 0 0 No -32 0.61 No 38 91.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 2739403 + NM_015295 SMCHD1 1 0.07 0.19 13 -0.95 70.47 16 6.72 Yes 34 -3.58 No 29 0.8 Yes -25 0.45 No 50 50.61 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 2743804 + NM_015295 SMCHD1 1 0.5 1.25 51 5.92 84.14 23 4.82 No 76 1.12 Yes 0 0 No -22 0.72 Yes 50 41.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 2745201 + NM_015295 SMCHD1 1 0.26 0.58 26 6.05 85.51 27 5.26 No 20 0.88 Yes 0 0 No -26 0.61 No 44 45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 2748050 + NM_015295 SMCHD1 1 0.09 0.26 15 -1.31 0 16 4.12 No 70 -5.59 No 0 0 No -19 0.69 Yes 51 55.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 2751302 + NM_015295 SMCHD1 1 0.16 0.25 14 2.69 82.36 20 4.71 No 19 0.73 No 0 0 No -19 0.63 No 48 63.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 2751332 + NM_015295 SMCHD1 1 0.36 0.61 33 0.62 65.71 28 5.64 Yes 49 0.73 No 0 0 No -27 0.59 No 43 61.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 2752489 + NM_015295 SMCHD1 1 0.08 0.14 9 3.33 0 53 7.37 Yes 40 1.2 Yes 0 0 No -52 0.5 No 18 63.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 2759508 + NM_015295 SMCHD1 1 0.11 0.18 11 10.04 93.33 28 5.05 No 23 1.21 Yes 0 0 No -27 0.54 No 43 50.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 2762109 + NM_015295 SMCHD1 1 0.15 0.43 21 -1.76 0 10 4 No 22 0.61 No 0 0 No -34 0.9 Yes 36 93.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 2764031 + NM_015295 SMCHD1 1 0.09 0.22 14 5.34 79.56 24 5 No 11 1.09 Yes 0 0 No -23 0.88 Yes 47 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 2784842 + NM_015295 SMCHD1 1 0.08 0.15 10 5.24 76.18 42 5.38 No 63 0.31 No 29 0.87 Yes -29 0.76 Yes 41 73.57 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 2799278 + NM_015295 SMCHD1 1 1.68 4.01 65 2.86 67.6 38 6.25 Yes 25 0.9 Yes 0 0 No -37 0.79 Yes 33 72.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 2800520 + NM_015295 SMCHD1 1 2.6 5.89 71 8.1 87.01 33 8.65 Yes 59 0.93 Yes 28 0.71 Yes -28 0.54 No 38 59.8 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 2802617 + NM_015295 SMCHD1 1 0.17 0.33 17 10.01 87 33 6.21 Yes 24 0.37 No 0 0 No -36 0.7 Yes 34 76.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 93212451 - NM_020179 SMCO4 1 12.76 7.69 71 6.21 82.27 43 7.2 Yes 30 0.63 No 38 0.43 Yes -42 0.6 No 32 77.51 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 93212670 - NM_020179 SMCO4 1 0.78 0.42 22 5.13 82.47 18 5.48 No 71 0.13 No 0 0 No -27 0.34 No 50 48.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 93214715 - NM_020179 SMCO4 1 0.27 0.18 10 9.73 87 27 4.85 No -4 1.16 Yes 0 0 No -24 0.43 No 46 47.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 42476403 + NM_033318 SMDT1 1 0.05 0.17 10 5.55 78.57 25 6.44 Yes 35 1.12 Yes 0 0 No -24 0.58 No 46 85.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 42478225 + NM_033318 SMDT1 1 0.1 0.32 17 1.84 83.04 27 8 Yes 14 1.88 Yes 0 0 No -26 0.89 Yes 44 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42478250 + NM_033318 SMDT1 1 0.03 0.11 7 5.5 90.92 28 5.29 No 39 1.87 Yes 0 0 No -51 0.43 No 19 92.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 42478300 + NM_033318 SMDT1 1 0.13 0.39 23 7.73 91.36 22 6.91 Yes 9 1.19 Yes 0 0 No -21 0.95 Yes 49 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42480073 + NM_033318 SMDT1 1 0.56 1.74 59 4.67 84.23 32 6.51 Yes 19 0.02 No 0 0 No -39 0.5 No 39 62.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18823447 - NM_015092 SMG1 1 4.66 6.58 70 4.84 86.19 32 3.68 No 14 0.62 No 0 0 No -26 0.85 Yes 44 80.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 18826566 - NM_015092 SMG1 1 0.95 1.35 47 3.3 69.34 20 5.01 No 49 0.56 No 0 0 No -23 0.68 Yes 47 65.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 18827312 - NM_015092 SMG1 1 0.26 0.25 12 9.37 81.73 23 5.39 No 25 0.31 No 0 0 No -22 0.74 Yes 48 92.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 18827877 - NM_015092 SMG1 1 0.05 0.1 7 -3.42 64.33 11 4.66 No 45 1.22 Yes 23 0.7 Yes -23 0.42 No 47 26.42 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 18840318 - NM_015092 SMG1 1 0.82 0.86 42 3.99 84.41 26 5.97 Yes 13 0.37 No 0 0 No -25 0.63 No 41 55.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18843074 - NM_015092 SMG1 1 0.21 0.19 11 4.74 84.41 84 9.51 Yes 76 -2.49 No 0 0 No -27 0.3 No 45 37.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18844452 - NM_015092 SMG1 1 0.07 0.13 7 3.03 79.84 32 6.77 Yes 37 0.63 No 0 0 No -41 0.53 No 45 38.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18846795 - NM_015092 SMG1 1 0.54 0.63 35 8.24 86.62 25 7.83 Yes 12 1.04 Yes 0 0 No -24 0.72 Yes 46 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18856969 - NM_015092 SMG1 1 0.21 0.38 22 -6.57 0 25 5.98 Yes 38 -2.07 No 0 0 No -28 0.42 No 33 49.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18861496 - NM_015092 SMG1 1 0.15 0.18 13 -0.81 52.06 44 6.3 Yes 31 0.21 No 0 0 No -34 0.66 Yes 36 64.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 18862382 - NM_015092 SMG1 1 0.19 0.13 8 10.56 99.37 28 5.4 No 1 0.23 No 0 0 No -27 0.62 No 43 73.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 18863524 - NM_015092 SMG1 1 0.22 0.13 8 1.65 0 26 5.95 Yes 13 1.28 Yes 0 0 No -25 0.87 Yes 45 91.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18864145 - NM_015092 SMG1 1 0.37 0.46 24 5.09 87.29 26 6.12 Yes 13 1.1 Yes 0 0 No -25 0.97 Yes 45 97.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18865185 - NM_015092 SMG1 1 0.2 0.21 11 0.2 0 25 6.12 Yes 60 1.32 Yes 0 0 No -24 0.68 Yes 39 57.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 18871533 - NM_015092 SMG1 1 1.31 1.92 56 1.69 0 31 6.04 Yes 14 1.46 Yes 0 0 No -26 0.89 Yes 44 90.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18882179 - NM_015092 SMG1 1 0.07 0.14 10 8.02 89.96 24 4.79 No 42 1.29 Yes 0 0 No -23 0.5 No 47 63.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 18883184 - NM_015092 SMG1 1 0.21 0.29 20 6.5 81.31 22 6.16 Yes 9 1.33 Yes 0 0 No -21 0.92 Yes 49 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18887360 - NM_015092 SMG1 1 0.3 0.26 18 3.2 68.02 46 6.75 Yes 54 1.18 Yes 0 0 No -34 0.88 Yes 36 85.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18890163 - NM_015092 SMG1 1 0.63 0.39 19 9.1 81.36 22 7.24 Yes 9 1.08 Yes 0 0 No -21 0.86 Yes 49 91.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18890938 - NM_015092 SMG1 1 1.84 2.35 57 6.24 84.55 29 5.65 Yes 16 0.79 Yes 0 0 No -28 0.9 Yes 42 95.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18895422 - NM_015092 SMG1 1 0.29 0.28 12 5.85 84.02 33 6.63 Yes 20 1.57 Yes 0 0 No -32 0.68 Yes 38 73.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 18895479 - NM_015092 SMG1 1 0.36 0.39 20 -3.08 0 20 3.94 No 72 0.23 No 0 0 No -34 0.49 No 36 40.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 18896478 - NM_015092 SMG1 1 1.09 1.19 43 -5.03 0 11 3.96 No 26 0.82 Yes 0 0 No -44 0.61 No 32 68.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 18900905 - NM_015092 SMG1 1 1.61 1.24 43 -4.58 52.71 48 5.85 Yes 34 0.33 No 0 0 No -47 0.82 Yes 23 82.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 18900949 - NM_015092 SMG1 1 0.18 0.14 9 -7.89 0 15 3.12 No 72 -2.69 No 43 0.09 Yes -36 0.51 No 34 32.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 18901808 - NM_015092 SMG1 1 1.68 1.11 50 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -23 0.53 No 49 66.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 18911367 - NM_015092 SMG1 1 51.78 23.69 72 8.37 87.26 86 8.37 Yes 28 1.42 Yes 23 0.84 Yes -23 0.51 No 47 71.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 18922803 - NM_015092 SMG1 1 1.33 0.61 29 7.81 88.21 26 5.19 No 61 0.59 No 0 0 No -25 0.82 Yes 45 53.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 18936869 - NM_015092 SMG1 1 0.35 0.18 12 7.31 80.83 31 6.29 Yes 18 1.31 Yes 30 0.82 Yes -30 0.95 Yes 40 95.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 22473444 + NR_027154 SMG1P1 1 0.7 0.14 7 -4.58 52.71 48 5.85 Yes 34 0.33 No 0 0 No -47 0.82 Yes 23 82.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 29570197 - NR_135305 SMG1P2 1 2.25 0.46 24 -4.58 52.71 48 5.85 Yes 34 0.33 No 0 0 No -47 0.82 Yes 23 82.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 21478534 - NR_027155 SMG1P3 1 2.35 0.44 26 6.24 84.55 29 5.65 Yes 16 0.79 Yes 0 0 No -28 0.92 Yes 42 95.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 21483062 - NR_027155 SMG1P3 1 1.2 0.38 23 -3.08 0 20 4.16 No 72 0.2 No 0 0 No -34 0.44 No 46 31.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 21484060 - NR_027155 SMG1P3 1 1.35 0.22 12 -5.03 0 11 3.96 No 26 0.82 Yes 0 0 No -44 0.58 No 32 67.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 21490850 - NR_027155 SMG1P3 1 0.81 0.14 10 6.3 81.73 30 5.49 No 69 0.01 No 0 0 No -29 0.6 No 41 54.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30309909 - NR_002453 SMG1P5 1 3.13 0.47 25 -4.58 52.71 48 5.85 Yes 34 0.33 No 0 0 No -47 0.82 Yes 23 82.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30320355 - NR_002453 SMG1P5 1 9.21 1.65 49 8.34 87.26 86 8.36 Yes 28 1.42 Yes 0 0 No -23 0.48 No 47 69.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 156220458 - NM_001323617 SMG5 1 0.12 0.17 12 1.41 0 40 6.77 Yes 55 0.67 No 0 0 No -28 0.64 No 42 78.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 156228926 - NM_001323617 SMG5 1 1.53 2.25 57 6.22 78.65 28 5.58 Yes 48 0.41 No 0 0 No -27 0.87 Yes 43 76.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 156228981 - NM_001323617 SMG5 1 0.27 0.4 22 -1.28 75.41 20 4.9 No 73 -5 No 31 0.81 Yes -19 0.54 No 53 21.62 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 156233377 - NM_001323617 SMG5 1 0.09 0.13 8 0.72 0 24 5 No 38 0.6 No 38 0.46 Yes -23 0.96 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 156234235 - NM_001323617 SMG5 1 1.47 2 60 5.49 72.78 21 4.55 No 74 0.99 Yes 0 0 No -20 0.77 Yes 50 80.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156237512 - NM_001323617 SMG5 1 0.16 0.36 20 9.27 85.87 34 7.28 Yes 21 1.64 Yes 30 0.96 Yes -33 0.85 Yes 37 76.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 156242693 - NM_001323617 SMG5 1 0.12 0.22 13 3.59 79.97 17 5.28 No 4 0.28 No 0 0 No -21 0.69 Yes 49 76.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 156243440 - NM_001323617 SMG5 1 0.66 1.53 47 2.67 77.53 35 4.48 No 6 -1.66 No 0 0 No -34 0.78 Yes 36 89.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 156247057 - NM_001323617 SMG5 1 0.08 0.18 12 3.05 78.3 19 4.98 No 6 0.93 Yes 30 0.96 Yes -24 0.73 Yes 46 54.5 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 1990474 - NM_017575 SMG6 1 0.32 0.1 7 4.06 74.79 15 5.66 Yes 29 0.6 No 0 0 No -27 0.6 No 43 84.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 1990474 - NM_017575 SMG6 1 0.38 0.1 7 4.06 74.79 15 5.66 Yes 29 0.6 No 0 0 No -27 0.6 No 43 84.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 2024014 - NM_017575 SMG6 1 0.45 0.17 10 9.96 94.82 30 5.64 Yes 17 0.95 Yes 0 0 No -29 0.9 Yes 41 96.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2026706 - NM_017575 SMG6 1 0.66 0.21 11 11.72 89.36 26 6.92 Yes 13 1.8 Yes 0 0 No -25 0.9 Yes 45 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2031214 - NM_017575 SMG6 1 0.73 0.24 16 6.77 81.35 36 5.25 No 71 1.19 Yes 0 0 No -21 0.84 Yes 49 83.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2067329 - NM_017575 SMG6 1 0.34 0.11 8 5.2 89.33 27 5.2 No 42 1.23 Yes 0 0 No -26 0.81 Yes 44 86.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2143007 - NM_017575 SMG6 1 0.61 0.29 19 10.07 92.11 29 5.48 No 71 1.1 Yes 0 0 No -31 0.7 Yes 39 66.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 2144287 - NM_017575 SMG6 1 0.99 0.49 28 7.19 94.94 16 5.39 No 3 0.89 Yes 0 0 No -22 0.31 No 48 58.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2154226 - NM_017575 SMG6 1 0.97 0.31 17 3.59 82.3 37 6.29 Yes 62 -0.65 No 0 0 No -27 0.58 No 43 75.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 2177718 - NM_017575 SMG6 1 0.39 0.13 7 10.46 95.86 94 9.08 Yes 72 1.16 Yes 0 0 No -23 0.88 Yes 47 83.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2183889 - NM_017575 SMG6 1 2.33 0.68 33 6.95 88.52 22 3.29 No 46 1.34 Yes 0 0 No -21 0.7 Yes 49 69.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 2201247 - NM_017575 SMG6 1 0.56 0.19 12 3.06 87.66 25 4.87 No 52 -3.84 No 0 0 No -18 0.43 No 48 56.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 2206447 - NM_017575 SMG6 1 4.26 0.42 25 2.95 0 22 6.93 Yes 9 1.47 Yes 0 0 No -20 0.5 No 42 51.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2206451 - NM_017575 SMG6 1 5.8 0.71 37 4.72 77.92 18 6.63 Yes 5 1.48 Yes 0 0 No -24 0.32 No 46 56.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 2206649 - NM_017575 SMG6 1 11.24 1.13 43 6.78 86.29 20 5.57 Yes 7 1.39 Yes 0 0 No -19 0.8 Yes 51 90.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183481975 + NM_001331007 SMG7 1 14.16 2.89 66 4.91 0 39 6.35 Yes 30 2.3 Yes 0 0 No -42 0.59 No 28 73.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 183477170 + NM_001331007 SMG7 1 4.17 0.78 35 6.16 83.97 44 6.37 Yes 31 1.24 Yes 0 0 No -27 0.87 Yes 43 88.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183481975 + NM_001331007 SMG7 1 2.53 0.5 27 4.91 0 39 6.35 Yes 30 2.3 Yes 0 0 No -42 0.59 No 28 73.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 183486760 + NM_001331007 SMG7 1 4.84 8.22 72 7.84 95.92 26 5.1 No 47 0.68 No 25 0.79 Yes -25 0.76 Yes 45 81.87 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 183487765 + NM_001331007 SMG7 1 0.3 0.4 21 8.92 87.4 26 5.26 No 10 0.62 No 0 0 No -25 0.34 No 45 45.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 183496760 + NM_001331007 SMG7 1 3.43 5.43 71 8.83 81.54 24 2.76 No 59 -3.89 No 29 0.56 Yes -31 0.76 Yes 39 81.45 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 183498056 + NM_001331007 SMG7 1 0.19 0.31 20 0.21 69.27 19 4.09 No 32 1.02 Yes 0 0 No -18 0.62 No 49 58.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 183498102 + NM_001331007 SMG7 1 1.37 1.88 63 6.35 88.47 24 6.32 Yes 11 1.46 Yes 0 0 No -23 0.93 Yes 47 92.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183502390 + NM_001331007 SMG7 1 1.18 2.03 61 3.95 73.78 35 7.65 Yes 22 1.92 Yes 0 0 No -34 0.68 Yes 36 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 183502836 + NM_001331007 SMG7 1 0.19 0.31 19 0.59 62.67 30 5.91 Yes 43 0.69 No 0 0 No -29 0.67 Yes 15 80.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 183514121 + NM_001331007 SMG7 1 0.63 0.74 35 5.02 82.9 35 6.92 Yes 69 0.94 Yes 0 0 No -43 0.42 No 27 75.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 183514154 + NM_001331007 SMG7 1 0.55 0.67 31 7.78 94.53 21 5.2 No 23 0.2 No 0 0 No -20 0.69 Yes 50 74.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 183514233 + NM_001331007 SMG7 1 0.12 0.13 9 6 84.57 14 5.1 No 43 -1.02 No 0 0 No -23 0.56 No 51 60.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 183515085 + NM_001331007 SMG7 1 0.19 0.25 13 7.24 83.95 32 6.33 Yes 43 0.79 Yes 22 0.87 Yes -36 0.34 No 39 54.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 183520934 + NM_001331007 SMG7 1 0.13 0.13 8 -0.02 68.37 16 6.03 Yes 50 -3.15 No 23 0.98 Yes -28 0.6 No 38 55.09 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 44233202 - NM_019108 SMG9 1 0.6 0.58 28 5.27 84.75 25 6.55 Yes 12 1.44 Yes 0 0 No -24 0.56 No 46 50.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44235264 - NM_019108 SMG9 1 0.15 0.15 11 6.31 75.92 49 6.73 Yes 9 1.23 Yes 0 0 No -32 0.88 Yes 38 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44237627 - NM_019108 SMG9 1 0.17 0.11 7 -0.19 72.46 59 6.59 Yes 46 1.43 Yes 18 0.88 Yes -47 0.58 No 23 70.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 44238600 - NM_019108 SMG9 1 0.39 0.28 17 6.18 76.51 24 5.38 No 11 0.72 No 0 0 No -23 0.69 Yes 47 58.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 44238741 - NM_019108 SMG9 1 0.28 0.21 13 -0.53 0 14 4.47 No 64 0.25 No 0 0 No -38 0.68 Yes 32 78.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 44252041 - NM_019108 SMG9 1 1.37 0.86 42 -2.24 0 19 4.24 No 21 1.03 Yes 0 0 No -33 0.91 Yes 37 91.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 35748335 + NM_058182 SMIM11A 1 0.2 0.13 9 -3.88 0 12 3.86 No 44 -2.55 No 0 0 No -18 0.55 No 52 53.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 35751731 + NM_058182 SMIM11A 1 0.25 0.14 10 2.31 0 30 7.14 Yes 17 1.72 Yes 0 0 No -29 0.94 Yes 41 94.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39554452 - NM_001317897 SMIM14 1 0.05 0.18 11 10.85 90.91 16 6.07 Yes 3 1.64 Yes 0 0 No -25 0.83 Yes 45 81.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39557780 - NM_001317897 SMIM14 1 0.04 0.17 11 11.29 95.65 29 7.18 Yes 16 0.48 No 0 0 No -22 0.46 No 49 49.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39559941 - NM_001317897 SMIM14 1 0.1 0.18 10 10.91 89.29 29 6.97 Yes 16 1.45 Yes 0 0 No -28 0.65 No 42 90.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 39572436 - NM_001317897 SMIM14 1 0.07 0.15 9 0.07 0 72 7.68 Yes 5 0.57 No 0 0 No -32 0.52 No 37 52.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39613731 - NM_001317897 SMIM14 1 0.81 1.31 46 10.9 89.4 24 5.53 No 11 1.4 Yes 23 0.88 Yes -23 0.9 Yes 47 93.73 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 39625479 - NM_001317897 SMIM14 1 0.17 0.24 14 11.62 93.33 28 5.82 Yes 15 1 Yes 0 0 No -27 0.81 Yes 43 90.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39628462 - NM_001317897 SMIM14 1 0.54 0.74 31 3.25 80.11 20 4.89 No 73 -5.41 No 0 0 No -19 0.67 Yes 51 74.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 60455893 - NM_001048249 SMIM15 1 0.05 0.11 8 4.33 74.34 38 7.56 Yes 4 1.24 Yes 0 0 No -37 0.52 No 33 64.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 42403517 + NM_001135675 SMIM19 1 0.24 0.43 20 8.87 87.33 32 5.93 Yes 0 0.53 No 31 0.46 Yes -31 0.87 Yes 39 91.99 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 42407690 + NM_001135675 SMIM19 1 0.69 1.22 49 -7.11 0 37 7.26 Yes 24 0.92 Yes 0 0 No -36 0.91 Yes 34 89.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25919224 + NM_001145432 SMIM20 1 0.47 0.21 13 7.81 81.74 22 4.84 No 20 0.31 No 0 0 No -21 0.85 Yes 49 73.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 25923222 + NM_001145432 SMIM20 1 0.35 0.14 7 -0.38 74.11 15 4.99 No 2 1.3 Yes 0 0 No -23 0.81 Yes 47 80.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25927253 + NM_001145432 SMIM20 1 0.6 0.26 15 10.89 92.09 20 5.74 Yes 7 0.28 No 0 0 No -26 0.66 Yes 51 75.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 150162035 + NM_032947 SMIM3 1 0.22 0.1 7 7.65 77.53 28 8.14 Yes 15 2.19 Yes 0 0 No -27 0.95 Yes 43 85.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16758099 - NM_024104 SMIM7 1 0.09 0.18 10 9.42 86.59 18 5.29 No 25 1.63 Yes 0 0 No -24 0.56 No 46 50.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 16763773 - NM_024104 SMIM7 1 5.31 12.1 72 7.99 86.18 28 6.63 Yes 15 0.33 No 28 0.74 Yes -36 0.47 No 34 52.02 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 16766180 - NM_024104 SMIM7 1 0.19 0.43 26 -6.69 86.15 29 7.35 Yes 16 1.23 Yes 28 0.9 Yes -28 0.9 Yes 42 93.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 16770285 - NM_024104 SMIM7 1 0.13 0.25 14 2.23 67.79 24 5.48 No 55 0.56 No 0 0 No -23 0.87 Yes 47 83.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 16770835 - NM_024104 SMIM7 1 0.56 0.94 42 -0.48 55.49 26 5.29 No 72 0.47 No 0 0 No -18 0.6 No 52 49.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 70242533 + NM_000344 SMN1 1 0.1 0.14 9 3.64 84.03 24 7.42 Yes 11 1.3 Yes 23 0.93 Yes -23 0.93 Yes 47 90.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 70242537 + NM_000344 SMN1 1 0.08 0.14 8 -0.9 0 28 7.68 Yes 15 1.29 Yes 0 0 No -27 0.93 Yes 43 90.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 112055139 - NM_005871 SMNDC1 1 0.1 0.17 10 -13.87 0 25 4.3 No 12 1.03 Yes 0 0 No -24 0.43 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 112057504 - NM_005871 SMNDC1 1 2.27 4.33 71 6.62 83.32 24 5.78 Yes 0 1.64 Yes 23 0.9 Yes -23 0.67 Yes 47 79.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 112060495 - NM_005871 SMNDC1 1 2.41 3.78 70 6.99 80.73 21 5.14 No 8 0.27 No 25 0.73 Yes -25 0.61 No 46 51.57 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 6412616 + NM_001318088 SMPD1 1 28.01 7.06 72 -0.46 69.6 34 7.76 Yes 14 1.22 Yes 23 0.97 Yes -26 0.88 Yes 44 87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 6415095 + NM_001318088 SMPD1 1 0.37 0.13 8 9.22 73.96 25 4.17 No 51 -0.36 No 21 0.93 Yes -28 0.7 Yes 38 55.39 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 6415407 + NM_001318088 SMPD1 1 2.1 0.65 32 9.19 84.35 24 5.83 Yes 11 0.82 Yes 23 0.88 Yes -23 0.7 Yes 47 71.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 6415448 + NM_001318088 SMPD1 1 1.54 0.49 28 5.59 66.94 19 5.48 No 52 0.77 No 0 0 No -18 0.45 No 52 26.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 109763162 + NM_003080 SMPD2 1 3.12 0.88 39 4.76 80.71 10 6.86 Yes 55 -2.36 No 19 0.9 Yes -24 0.6 No 37 50.39 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 109764518 + NM_003080 SMPD2 1 0.68 0.24 15 2.56 76.3 22 5.1 No 48 0.96 Yes 0 0 No -22 0.76 Yes 48 66.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 109764534 + NM_003080 SMPD2 1 1.12 0.35 22 5.69 91.08 24 4.82 No 64 0.96 Yes 0 0 No -23 0.42 No 52 59.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 130914200 - NR_033230 SMPD4 1 0.12 0.17 11 8.75 86.38 15 5.12 No 57 1.56 Yes 26 0.81 Yes -26 0.66 No 47 55.09 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 130914387 - NR_033230 SMPD4 1 2.18 3.18 65 5.47 81.09 33 9.42 Yes 20 1.87 Yes 23 0.9 Yes -32 0.77 Yes 38 87.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 130931140 - NR_033230 SMPD4 1 0.34 0.49 26 4.78 89.79 41 6.86 Yes NA NA NA 0 0 No -38 0.58 No 52 52.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 130931178 - NR_033230 SMPD4 1 0.1 0.15 11 -3.77 0 21 5 No 57 0.35 No 21 0.54 Yes -45 0.49 No 25 49.89 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 130931183 - NR_033230 SMPD4 1 0.14 0.24 9 -4.1 0 16 4.5 No 52 0.36 No 21 0.54 Yes -40 0.58 No 52 44.39 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 130931227 - NR_033230 SMPD4 1 0.1 0.17 9 -10.75 71.41 21 7.42 Yes 8 0.36 No 0 0 No -20 0.87 Yes 50 87.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 21960393 + NM_004595 SMS 1 0.09 0.21 9 4.95 68.36 30 6.5 Yes 17 1.4 Yes 0 0 No -29 0.89 Yes 41 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 21997003 + NM_004595 SMS 1 0.21 0.79 42 -6.36 0 43 7.74 Yes 68 0.79 Yes 0 0 No -22 0.62 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 22012238 + NM_004595 SMS 1 0.03 0.13 9 3.26 0 15 4.58 No 2 0.59 No 0 0 No -18 0.57 No 52 53.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 22012789 + NM_004595 SMS 1 0.09 0.39 21 8.15 86.09 57 8.07 Yes 64 2.38 Yes 0 0 No -56 0.75 Yes 14 85.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 31478895 + NM_006932 SMTN 1 0.4 0.11 8 6.13 79.58 31 5.62 Yes 18 0.62 No 30 0.9 Yes -30 0.86 Yes 40 90.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 31478901 + NM_006932 SMTN 1 1.07 0.24 17 0.14 0 9 3.87 No 24 0.61 No 30 0.9 Yes -36 0.86 Yes 34 91.83 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 31484439 + NM_006932 SMTN 1 4.95 0.83 40 6.13 72.8 37 6.52 Yes 68 -2.13 No 25 0.46 Yes -22 0.43 No 33 61.89 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 31486422 + NM_006932 SMTN 1 0.5 0.17 8 5.76 78.11 25 5.57 Yes 12 0.51 No 0 0 No -24 0.94 Yes 46 89.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 31489769 + NM_006932 SMTN 1 1.35 0.36 19 3.81 0 21 4.57 No 50 -2.43 No 20 0.74 Yes -20 0.84 Yes 50 66.51 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 31491528 + NM_006932 SMTN 1 1.51 0.42 22 -4.84 0 18 4.24 No 14 -0.83 No 0 0 No -30 0.41 No 40 39.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 31495050 + NM_006932 SMTN 1 2.09 0.69 30 1.2 72.46 19 5.75 Yes 6 1.71 Yes 0 0 No -18 0.48 No 30 50.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 33057642 - NM_018225 SMU1 1 0.04 0.11 8 5.87 80.77 29 6.13 Yes 75 2.19 Yes 0 0 No -28 0.47 No 39 48.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 33057645 - NM_018225 SMU1 1 0.06 0.17 9 7.06 78.48 26 5.97 Yes 72 2.19 Yes 0 0 No -32 0.45 No 42 47.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 33060540 - NM_018225 SMU1 1 0.49 0.97 41 8.75 89.39 12 5.29 No 50 0.19 No 0 0 No -29 0.63 No 41 72.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 33060582 - NM_018225 SMU1 1 0.09 0.17 12 -17.22 0 37 6.83 Yes 8 0.21 No 0 0 No -29 0.61 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33069216 - NM_018225 SMU1 1 0.03 0.11 7 7.74 84.09 27 6.64 Yes 14 0.47 No 0 0 No -26 0.76 Yes 44 76.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33073648 - NM_018225 SMU1 1 0.05 0.13 8 5.16 84.18 30 5.83 Yes 38 0.15 No 0 0 No -29 0.93 Yes 41 94.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 54581080 - NM_001243788 SMUG1 1 3.1 0.32 18 10.92 78.17 28 6.42 Yes 15 1.59 Yes 27 0.91 Yes -27 0.83 Yes 43 89.22 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 54581687 - NM_001243788 SMUG1 1 26.27 2.96 66 5.08 77.57 32 5.49 No 61 0.24 No 27 0.75 Yes -29 0.82 Yes 41 82.43 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 54581690 - NM_001243788 SMUG1 1 58.86 6.72 71 8.04 85.84 29 5.22 No 58 0.24 No 27 0.75 Yes -26 0.84 Yes 44 83.1 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 54582381 - NM_001243788 SMUG1 1 37.39 4.39 70 6.15 83.32 27 5.74 Yes 59 0.6 No 24 0.36 Yes -26 0.79 Yes 11 49.03 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 98680364 - NM_020429 SMURF1 1 2.68 0.51 23 11.43 95.1 35 6.16 Yes 29 0.68 No 0 0 No -32 0.49 No 38 43.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 98718827 - NM_020429 SMURF1 1 3.74 0.71 33 7.32 86.41 51 9.21 Yes 38 1.94 Yes 22 0.02 Yes -50 0.9 Yes 20 96.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 62541609 - NM_022739 SMURF2 1 0.92 0.46 24 8.93 84.48 23 5.71 Yes 10 0.22 No 0 0 No -22 0.46 No 48 47.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 62566638 - NM_022739 SMURF2 1 0.82 0.35 17 4.12 75.06 18 5.89 Yes 5 2.03 Yes 0 0 No -27 0.59 No 43 76.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 62566672 - NM_022739 SMURF2 1 0.31 0.14 8 10.83 84.67 33 7.45 Yes 37 0.55 No 0 0 No -26 0.68 Yes 44 72.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 62574713 - NM_022739 SMURF2 1 0.55 0.21 12 6.74 86.8 32 5.52 No 5 1.2 Yes 23 0.85 Yes -25 0.59 No 45 65.33 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 62587263 - NM_022739 SMURF2 1 0.67 0.26 15 -4.31 0 41 7.14 Yes 38 1.42 Yes 0 0 No -40 0.64 No 25 68.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 62590223 - NM_022739 SMURF2 1 7.43 2.64 62 10.34 91.88 30 6.32 Yes 17 2.1 Yes 29 0.78 Yes -30 0.71 Yes 41 69.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 62591301 - NM_022739 SMURF2 1 0.4 0.15 9 4.35 69.38 32 5.91 Yes 63 0.24 No 0 0 No -32 0.59 No 42 50.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 62610045 - NM_022739 SMURF2 1 7.53 0.56 29 11.51 88.98 32 5.43 No 19 1.47 Yes 0 0 No -31 0.66 No 39 85.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 214460214 + NM_020197 SMYD2 1 0.35 0.11 8 4.55 84.41 26 6.55 Yes 13 1.93 Yes 0 0 No -31 0.58 No 39 70.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 214478534 + NM_020197 SMYD2 1 1 0.33 21 -4.08 0 32 4.99 No 39 0.97 Yes 0 0 No -26 0.79 Yes 44 81.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 214499828 + NM_020197 SMYD2 1 0.52 0.36 21 9.44 83.1 43 8.17 Yes 71 0.44 No 0 0 No -33 0.29 No 48 60.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 214508071 + NM_020197 SMYD2 1 0.37 0.29 18 5.08 77.97 14 5.13 No 2 0.41 No 0 0 No -24 0.84 Yes 46 67.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 245932188 - NM_022743 SMYD3 1 0.93 0.22 14 9.28 91.87 28 5.37 No 23 0.48 No 0 0 No -31 0.61 No 39 61.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 245977718 - NM_022743 SMYD3 1 0.76 0.17 11 10.14 90.03 77 8.08 Yes 64 2.01 Yes 33 0.65 Yes -33 0.52 No 24 50.78 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 246021978 - NM_022743 SMYD3 1 1 0.28 15 -16.15 0 13 3.79 No 41 1.18 Yes 18 0.73 Yes -13 0.43 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 246092855 - NM_022743 SMYD3 1 2.54 0.81 39 5.58 82.26 32 5.46 No 7 1.07 Yes 0 0 No -31 0.46 No 39 40.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 246216372 - NM_022743 SMYD3 1 3.62 0.83 31 10.29 87.72 28 7.67 Yes 15 1.24 Yes 27 0.88 Yes -27 0.91 Yes 43 90.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 246350245 - NM_022743 SMYD3 1 3.55 0.94 36 7.82 88.71 23 7.24 Yes 10 0.93 Yes 0 0 No -22 0.94 Yes 48 94.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 246357266 - NM_022743 SMYD3 1 1.56 0.36 20 7.08 88.91 29 6.36 Yes 16 1.31 Yes 0 0 No -28 0.38 No 42 66.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 246370762 - NM_022743 SMYD3 1 0.84 0.21 13 7.39 73.49 45 5.91 Yes 17 1.96 Yes 0 0 No -29 0.81 Yes 41 84.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 246467344 - NM_022743 SMYD3 1 0.61 0.15 8 10.65 92 29 8.06 Yes 8 0.81 Yes 0 0 No -28 0.44 No 42 57.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 246489264 - NM_022743 SMYD3 1 6.68 1.61 53 7.03 87.58 28 7.9 Yes -1 1.11 Yes 0 0 No -27 0.73 Yes 43 78.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 246489888 - NM_022743 SMYD3 1 1.7 0.44 24 9.52 87.44 31 6.48 Yes 18 1.13 Yes 0 0 No -30 0.8 Yes 40 86.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 246490063 - NM_022743 SMYD3 1 1.76 0.4 21 10.68 88.27 36 7.7 Yes 23 0.88 Yes 0 0 No -39 0.73 Yes 31 77.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1684853 - NM_052928 SMYD4 1 0.54 0.15 9 9.74 77.17 25 5.27 No 39 1.5 Yes 0 0 No -24 0.85 Yes 46 93.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1684887 - NM_052928 SMYD4 1 0.72 0.26 14 10.06 92.73 29 6.93 Yes 5 1.52 Yes 0 0 No -29 0.58 No 42 63.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 1686818 - NM_052928 SMYD4 1 1.33 0.29 17 8.86 83.82 23 5.39 No -4 0.21 No 0 0 No -22 0.89 Yes 48 76.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 1687869 - NM_052928 SMYD4 1 9.51 2.15 60 5.5 87.33 18 5.07 No 67 1.41 Yes 0 0 No -28 0.94 Yes 42 95.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1718090 - NM_052928 SMYD4 1 3.64 0.99 47 5.66 84.51 31 6.08 Yes 29 0.4 No 30 0.35 Yes -30 0.62 No 40 62 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 1724802 - NM_052928 SMYD4 1 7 1.94 48 2.49 0 44 6.93 Yes 31 0.98 Yes 0 0 No -43 0.79 Yes 27 91.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1724806 - NM_052928 SMYD4 1 2.56 0.69 31 1.6 83 40 6.63 Yes 27 0.99 Yes 0 0 No -39 0.68 Yes 31 91.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1726499 - NM_052928 SMYD4 1 2.9 0.86 42 7.28 85.02 42 7.27 Yes 29 1.64 Yes 0 0 No -41 0.65 No 29 82.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 1728525 - NM_052928 SMYD4 1 1.42 0.38 22 11.19 95.91 14 5.36 No 1 1.39 Yes 0 0 No -31 0.64 No 39 65.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 73447079 + NM_006062 SMYD5 1 2.68 1.71 50 0 62.74 43 8 Yes 51 0.77 No 27 0.91 Yes -27 0.76 Yes 43 67.07 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 73447197 + NM_006062 SMYD5 1 2.49 1.56 54 5.7 68.2 28 4.94 No 1 1.44 Yes 27 0.93 Yes -27 0.8 Yes 43 67.82 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 73448295 + NM_006062 SMYD5 1 0.34 0.17 11 -10.17 74.93 25 6.08 Yes 61 0.01 No 27 0.59 Yes -24 0.49 No 40 65.32 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 73452967 + NM_006062 SMYD5 1 0.44 0.28 15 5.42 71.03 37 5.18 No 65 2.19 Yes 0 0 No -36 0.66 No 34 72.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 88731164 + NR_024402 SNAI3-AS1 1 3.29 0.15 10 5.67 84.79 15 6.16 Yes 2 1.53 Yes 0 0 No -37 0.27 No 33 20.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 88738269 + NR_024402 SNAI3-AS1 1 0.5 0.13 8 6.6 82.97 25 4.73 No 27 1.68 Yes 0 0 No -39 0.38 No 48 48.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 42797319 + NM_130798 SNAP23 1 0.18 0.32 14 11.34 95.02 31 6.32 Yes 12 1.17 Yes 30 0.78 Yes -24 0.5 No 46 71.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 42802354 + NM_130798 SNAP23 1 0.07 0.14 8 1.29 83.04 38 6.04 Yes 15 0.2 No 0 0 No -27 0.41 No 42 54.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42802358 + NM_130798 SNAP23 1 0.32 0.57 31 3.86 0 42 6.32 Yes 19 0.19 No 0 0 No -31 0.41 No 38 61.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42805371 + NM_130798 SNAP23 1 0.1 0.25 12 9.59 85.9 31 8.06 Yes 18 1.65 Yes 30 0.91 Yes -30 0.9 Yes 40 95.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 21225142 + NM_004782 SNAP29 1 0.46 0.57 28 6.22 65.87 35 6.94 Yes 26 1.15 Yes 0 0 No -29 0.6 No 36 82.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 227958271 + NM_001323933 SNAP47 1 2.11 1.31 50 13.72 90.59 36 6.86 Yes 23 1.68 Yes 35 0.72 Yes -35 0.78 Yes 35 89.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 227963489 + NM_001323933 SNAP47 1 1.16 0.75 36 10.69 98.31 25 6.27 Yes 12 1.24 Yes 24 0.76 Yes -24 0.73 Yes 46 82.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 62233599 + NM_003082 SNAPC1 1 0.38 0.11 7 -0.11 0 12 3.87 No 18 0.82 Yes 0 0 No -30 0.37 No 40 63.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 62235364 + NM_003082 SNAPC1 1 0.57 0.29 16 2.03 0 18 4.29 No 23 -3.3 No 0 0 No -17 0.73 Yes 53 55.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 62236985 + NM_003082 SNAPC1 1 0.57 0.14 9 7.9 83.19 50 5.77 Yes 49 0.53 No 0 0 No -39 0.68 Yes 31 70.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 7987368 + NM_003083 SNAPC2 1 1.2 0.57 29 8.5 83.54 14 6.16 Yes 52 1.59 Yes 0 0 No -21 0.44 No 49 73.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 139274966 - NM_003086 SNAPC4 1 0.35 0.14 10 10.58 79.69 35 7.28 Yes 22 1.09 Yes 0 0 No -34 0.6 No 36 67.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139276442 - NM_003086 SNAPC4 1 3.45 0.92 38 4.85 73.65 27 5.57 Yes 60 0.5 No 0 0 No -26 0.81 Yes 44 85.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 139276483 - NM_003086 SNAPC4 1 2.38 0.58 34 9.34 84.58 32 5.83 Yes 19 0.52 No 0 0 No -27 0.66 No 43 70.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 139282326 - NM_003086 SNAPC4 1 1.79 0.49 22 11.41 86.77 29 5.57 Yes NA NA NA 29 0.68 Yes -28 0.77 Yes 42 86.55 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 139283039 - NM_003086 SNAPC4 1 0.57 0.14 9 -7.86 0 38 6.64 Yes 25 1.69 Yes 0 0 No -37 0.57 No 33 86.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 139285715 - NM_003086 SNAPC4 1 1.19 0.29 14 6.65 92.03 42 6.48 Yes 29 0.01 No 0 0 No -26 0.73 Yes 44 60.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 139286665 - NM_003086 SNAPC4 1 1.46 0.36 21 5.27 80.65 21 5.05 No -4 0.37 No 0 0 No -23 0.6 No 47 83.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 139286869 - NM_003086 SNAPC4 1 1.14 0.28 16 6.69 81.38 25 5.56 Yes 12 0.26 No 0 0 No -24 0.79 Yes 45 51.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 139287043 - NM_003086 SNAPC4 1 1.67 0.49 26 -1.25 0 19 5.43 No 6 1.35 Yes 0 0 No -26 0.65 No 44 69.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139291562 - NM_003086 SNAPC4 1 1.78 0.68 29 6.98 79.76 29 5.66 Yes 34 0.77 No 0 0 No -28 0.84 Yes 42 78.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 153631594 + NM_012437 SNAPIN 1 0.36 0.4 21 7.61 78.62 18 5.75 Yes -3 1.34 Yes 28 0.89 Yes -27 0.69 Yes 53 60.36 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 153631759 + NM_012437 SNAPIN 1 0.09 0.1 7 9.53 91.99 23 5.37 No 10 0.96 Yes 0 0 No -22 0.82 Yes 48 87.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 127316821 + NM_014390 SND1 1 0.06 0.19 11 5.45 84.65 41 6.31 Yes 28 1.21 Yes 0 0 No -40 0.7 Yes 30 53.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 127361349 + NM_014390 SND1 1 0.02 0.13 7 -1.23 0 14 4.24 No 1 0.28 No 0 0 No -32 0.61 No 38 76.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 127362879 + NM_014390 SND1 1 0.01 0.11 8 10.93 85.77 33 4.47 No 17 0.44 No 0 0 No -32 0.67 Yes 38 82.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 127365724 + NM_014390 SND1 1 0.04 0.32 17 10.4 92.23 28 5.83 Yes 15 0.64 No 0 0 No -27 0.8 Yes 43 73.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 127372852 + NM_014390 SND1 1 0.02 0.11 7 4.17 72.9 39 6.26 Yes -3 0.43 No 0 0 No -26 0.56 No 45 68.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 127444666 + NM_014390 SND1 1 0.6 4.19 68 10.27 84.33 31 6.78 Yes 18 1.71 Yes 0 0 No -30 0.83 Yes 40 95.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 127476610 + NM_014390 SND1 1 0.03 0.15 9 3.31 73.74 43 6.13 Yes 48 1.37 Yes 0 0 No -28 0.47 No 35 46.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 127486809 + NM_014390 SND1 1 0.07 0.42 20 10.12 98.09 36 7.36 Yes 23 1.15 Yes 0 0 No -35 0.59 No 35 84.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 127541436 + NM_014390 SND1 1 0.05 0.31 17 8.06 84.19 19 5.16 No 6 0.97 Yes 0 0 No -25 0.94 Yes 45 94.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 127542959 + NM_014390 SND1 1 0.03 0.15 9 2.83 83.78 28 7.66 Yes 15 1.42 Yes 0 0 No -27 0.77 Yes 43 91.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 127543262 + NM_014390 SND1 1 0.02 0.13 8 9.21 91.22 27 4.85 No 33 0.44 No 0 0 No -32 0.54 No 38 71.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 127558300 + NM_014390 SND1 1 0.17 0.88 33 7.92 93.23 24 6.24 Yes 11 1.41 Yes 0 0 No -23 0.94 Yes 47 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 127558303 + NM_014390 SND1 1 0.05 0.28 17 5.22 86.43 27 6.48 Yes 14 1.39 Yes 0 0 No -26 0.95 Yes 44 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 127568112 + NM_014390 SND1 1 0.1 0.6 29 4.27 67.69 27 6.31 Yes 14 1.57 Yes 22 0.86 Yes -26 0.87 Yes 44 86.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 127617049 + NM_014390 SND1 1 0.02 0.15 7 5.7 86.62 23 5 No 10 1.47 Yes 0 0 No -22 0.91 Yes 48 95.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 47009077 - NM_001317193 SNF8 1 3.25 10.46 72 3.31 75.09 32 7.06 Yes 19 1.46 Yes 28 0.86 Yes -31 0.64 No 39 62.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 47014296 - NM_001317193 SNF8 1 0.18 0.56 27 8.18 86.78 26 5.16 No 13 0.51 No 25 0.76 Yes -26 0.43 No 45 52.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 62620131 - NR_003098 SNHG1 1 0.81 2.57 59 -5.95 0 17 4.12 No 58 0.41 No 0 0 No -51 0.38 No 19 54.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62620139 - NR_003098 SNHG1 1 1.2 3.78 67 -4.08 77.79 25 4.45 No 50 0.42 No 29 0.65 Yes -43 0.39 No 29 60.15 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 62621531 - NR_003098 SNHG1 1 0.06 0.17 10 -4.55 0 13 3.87 No 16 0.65 No 0 0 No -28 0.8 Yes 42 91.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62621534 - NR_003098 SNHG1 1 0.05 0.15 9 -11.73 73.75 26 5.74 Yes 13 0.63 No 0 0 No -25 0.84 Yes 45 92.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62621543 - NR_003098 SNHG1 1 0.07 0.24 15 -4.54 0 17 5.01 No 72 0.89 Yes 22 0.91 Yes -16 0.72 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 37079422 + NR_003239 SNHG11 1 1.07 0.13 7 8.43 88.81 12 4.98 No 55 0.2 No 23 0.52 Yes -20 0.65 No 50 52.14 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 45023557 - NR_003697 SNHG15 1 0.19 0.22 15 5.03 77.01 33 5.67 Yes 33 1.51 Yes 32 0.96 Yes -32 0.95 Yes 38 97.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 83421190 + NR_110096 SNHG21 1 8.16 1.18 51 3.82 0 28 6.99 Yes 15 0.87 Yes 0 0 No -27 0.84 Yes 36 64.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 138610052 + NR_036536 SNHG4 1 4 3.11 65 12.02 83.37 28 5.34 No 53 0.18 No 27 0.79 Yes -27 0.68 Yes 43 81.43 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 138615623 + NR_036536 SNHG4 1 253.72 24.99 72 5.19 89.38 20 5.29 No 74 1.44 Yes 29 0.68 Yes -29 0.44 No 41 54.08 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 86387587 - NR_003038 SNHG5 1 0.68 10 69 1.44 0 10 4 No 15 0.84 Yes 0 0 No -27 0.6 No 43 84.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 86387618 - NR_003038 SNHG5 1 0.09 1.49 44 1.88 67.67 26 5.19 No 55 0.64 No 20 0.75 Yes -25 0.69 Yes 45 74.54 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 67836437 - NR_002599 SNHG6 1 0.04 0.1 7 8.65 73.09 19 5.45 No -1 0.19 No 0 0 No -25 0.81 Yes 45 82.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 38014589 - NM_024700 SNIP1 1 3.03 1.36 51 6.38 71.85 35 7.87 Yes 22 1.07 Yes 34 0.64 Yes -29 0.69 Yes 41 72.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 11764472 + NM_003498 SNN 1 0.57 0.22 12 4.2 63.92 63 9.17 Yes 50 2.47 Yes 0 0 No -31 0.81 Yes 13 74.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 43331231 + NM_017719 SNRK 1 16.42 4.67 71 10.49 83.71 30 7.43 Yes 17 1.51 Yes 29 0.8 Yes -29 0.79 Yes 41 74.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 43339803 + NM_017719 SNRK 1 0.38 0.1 7 7.04 84.77 32 6.51 Yes 70 -2.18 No 0 0 No -31 0.91 Yes 39 94.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 43345564 + NM_017719 SNRK 1 0.67 0.26 13 9.27 88.38 36 6.26 Yes 23 1.31 Yes 0 0 No -35 0.64 No 35 73.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 43351382 + NM_017719 SNRK 1 1.32 0.58 31 3.79 70.64 55 5.95 Yes 39 0.7 No 0 0 No -54 0.87 Yes 16 83.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 96941126 - NM_014014 SNRNP200 1 0.06 0.18 11 0.63 66.71 58 8.54 Yes 45 1.18 Yes 26 0.8 Yes -36 0.57 No 34 80.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 96944095 - NM_014014 SNRNP200 1 0.06 0.15 8 -1.87 79.27 23 6.24 Yes 10 1.5 Yes 0 0 No -22 0.94 Yes 48 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 96948816 - NM_014014 SNRNP200 1 0.22 0.33 18 5.46 65.76 15 5.36 No 72 -2.11 No 0 0 No -24 0.43 No 48 54.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 96950260 - NM_014014 SNRNP200 1 0.06 0.15 11 3.62 82.36 26 4.97 No 13 -1.1 No 25 0.95 Yes -25 0.63 No 45 51.61 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 96957189 - NM_014014 SNRNP200 1 0.43 1.11 46 8.06 87.12 41 6.77 Yes 63 1.21 Yes 0 0 No -24 0.79 Yes 46 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 96960174 - NM_014014 SNRNP200 1 0.13 0.38 20 8.32 87.82 24 6.6 Yes 11 2.2 Yes 0 0 No -23 0.92 Yes 47 93.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 105114 + NM_024571 SNRNP25 1 0.15 0.35 20 4.65 79.25 95 7.49 Yes 35 0.57 No 0 0 No -25 0.47 No 14 53.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 106320 + NM_024571 SNRNP25 1 0.08 0.19 12 3.16 67.47 30 4.95 No 50 1.72 Yes 23 0.94 Yes -23 0.73 Yes 47 67.4 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 70122197 + NM_006857 SNRNP27 1 0.07 0.13 7 -1.98 0 14 4.47 No 48 0.63 No 22 0.68 Yes -60 0.43 No 62 34.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 70122232 + NM_006857 SNRNP27 1 0.06 0.13 7 -1.34 0 10 4 No -3 -1.76 No 0 0 No -40 0.56 No 27 61.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 70131389 + NM_006857 SNRNP27 1 0.09 0.14 10 -0.19 0 39 5.92 Yes 64 1.69 Yes 0 0 No -38 0.56 No 41 51.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 31732991 - NM_004814 SNRNP40 1 0.13 0.44 23 5.75 81.42 19 4.98 No 6 0.77 Yes 24 0.57 Yes -22 0.52 No 52 74.69 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 31734024 - NM_004814 SNRNP40 1 1.45 4.79 70 7.28 85.02 27 6.16 Yes 14 1.37 Yes 26 0.93 Yes -26 0.91 Yes 44 94.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 31744035 - NM_004814 SNRNP40 1 0.11 0.38 24 8.86 90.08 24 5 No 41 0.58 No 0 0 No -22 0.71 Yes 48 85.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49589622 + NM_003089 SNRNP70 1 0.11 0.4 23 8.33 91.08 22 5.1 No 9 0.88 Yes 29 0.95 Yes -21 0.89 Yes 49 90.95 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 49590890 + NM_003089 SNRNP70 1 0.04 0.25 12 -4.68 53.53 51 7.21 Yes 38 0.33 No 22 0.53 Yes -46 0.76 Yes 24 83.11 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 49593724 + NM_003089 SNRNP70 1 0.08 0.38 22 -5.68 73.56 32 7.66 Yes 45 1.4 Yes 0 0 No -31 0.8 Yes 39 76.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49594352 + NM_003089 SNRNP70 1 0.1 0.43 24 4.91 88.79 18 3.99 No 48 -2.37 No 0 0 No -23 0.69 Yes 47 82.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49602071 + NM_003089 SNRNP70 1 0.29 1.99 57 8.09 83.54 13 5.15 No 0 0.39 No 0 0 No -22 0.87 Yes 48 79.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49605370 + NM_003089 SNRNP70 1 7.32 47.79 72 6.87 85.13 23 5.16 No 10 1.35 Yes 22 0.92 Yes -26 0.88 Yes 44 88.02 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 49607908 + NM_003089 SNRNP70 1 0.06 0.4 23 2.9 69.72 23 4.62 No 61 0.76 No 0 0 No -20 0.49 No 50 30.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49609223 + NM_003089 SNRNP70 1 0.16 0.58 32 4.23 84.43 34 5.96 Yes 65 0.39 No 0 0 No -33 0.84 Yes 37 86.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49609342 + NM_003089 SNRNP70 1 0.12 0.51 27 7.82 81.58 28 6.16 Yes 60 -3.39 No 0 0 No -31 0.62 No 39 64.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 49610850 + NM_003089 SNRNP70 1 0.13 0.53 26 7.79 83.4 34 7 Yes 64 1.15 Yes 27 0.92 Yes -33 0.93 Yes 37 96.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 49610884 + NM_003089 SNRNP70 1 0.06 0.24 14 -7.38 73.7 31 6.56 Yes 18 1.43 Yes 0 0 No -30 0.95 Yes 40 90.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 49611078 + NM_003089 SNRNP70 1 26.68 78.13 72 7.41 85.43 34 6 Yes 21 0.55 No 33 0.53 Yes -33 0.93 Yes 37 91.27 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 41257913 + NM_004596 SNRPA 1 0.04 0.19 13 5.24 72.23 78 9.27 Yes 16 0.92 Yes 0 0 No -26 0.37 No 42 61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 41263214 + NM_004596 SNRPA 1 0.06 0.24 15 -10.61 0 10 2.94 No 36 1.36 Yes 26 0.87 Yes -48 0.81 Yes 22 88.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 41263271 + NM_004596 SNRPA 1 0.08 0.32 17 6.28 83.2 31 5.74 Yes 49 0.43 No 30 0.8 Yes -30 0.92 Yes 40 85.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 41264688 + NM_004596 SNRPA 1 0.09 0.26 16 -3.01 0 77 8.3 Yes 54 1.7 Yes 26 0.03 Yes -54 0.08 No 23 16.36 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 41265344 + NM_004596 SNRPA 1 0.35 1.22 49 -2.59 0 18 4.24 No 22 1.57 Yes 26 0.95 Yes -35 0.64 No 36 67.57 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 101826038 - NM_003090 SNRPA1 1 0.03 0.1 7 5.79 83.26 28 5.19 No 42 0.2 No 26 0.98 Yes -27 0.58 No 43 45.88 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 101830128 - NM_003090 SNRPA1 1 0.17 0.89 35 4.74 84.41 24 7.14 Yes 11 0.64 No 23 0.65 Yes -30 0.7 Yes 40 59.77 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 101832238 - NM_003090 SNRPA1 1 0.06 0.24 15 1.94 0 16 4.11 No 16 0.98 Yes 0 0 No -28 0.75 Yes 42 86.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 2442440 - NM_003091 SNRPB 1 49.14 272.74 72 11.92 94.9 27 6.24 Yes 14 0.97 Yes 26 0.96 Yes -26 0.97 Yes 44 97.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 2444568 - NM_003091 SNRPB 1 0.01 0.13 7 -1.82 70.51 24 4.89 No 32 0.02 No 24 0.69 Yes -23 0.61 No 33 76.21 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 2445520 - NM_003091 SNRPB 1 0.07 0.47 23 12.56 88.27 28 4.71 No 46 0.17 No 0 0 No -32 0.79 Yes 38 83.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2446233 - NM_003091 SNRPB 1 0.05 0.36 20 10.84 83.6 35 6.24 Yes 22 0.5 No 0 0 No -34 0.96 Yes 36 97.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2447962 - NM_003091 SNRPB 1 0.57 6.21 72 14.29 92.79 26 4.15 No 3 1.35 Yes 0 0 No -25 0.6 No 46 52.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 2450729 - NM_003091 SNRPB 1 0.02 0.24 14 8.99 87.99 24 6.03 Yes 67 1.1 Yes 0 0 No -23 0.87 Yes 47 54.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 16712843 + NM_003092 SNRPB2 1 0.05 0.24 15 7.37 83.76 31 5.83 Yes 49 1.48 Yes 0 0 No -30 0.59 No 40 54.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 34725625 + NM_003093 SNRPC 1 0.25 1.03 35 8.79 79.83 57 7.05 Yes 60 1.03 Yes 0 0 No -56 0.52 No 14 29.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 34740727 + NM_003093 SNRPC 1 0.76 5.18 72 3.72 79.84 18 4.8 No 53 0.97 Yes 0 0 No -22 0.41 No 53 49.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 19203831 + NM_006938 SNRPD1 1 0.02 0.14 8 5.14 92.68 25 6.24 Yes 12 0.53 No 28 0.66 Yes -24 0.78 Yes 46 84.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 19202914 + NM_006938 SNRPD1 1 0.02 0.17 10 9.78 91.39 26 5.94 Yes 13 0.86 Yes 0 0 No -25 0.53 No 45 56.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 19203710 + NM_006938 SNRPD1 1 0.05 0.43 26 -14.16 0 31 6.74 Yes 15 1 Yes 0 0 No -30 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 19203831 + NM_006938 SNRPD1 1 0.62 6.64 69 5.14 92.68 25 6.24 Yes 12 0.53 No 28 0.66 Yes -24 0.78 Yes 46 84.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 46191012 - NM_177542 SNRPD2 1 0.1 1.78 35 3.13 75.81 24 5.29 No -4 1.15 Yes 23 0.92 Yes -23 0.69 Yes 47 42.56 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 46191033 - NM_177542 SNRPD2 1 0.01 0.25 14 -6.48 62.67 19 4.16 No 68 -0.21 No 23 0.92 Yes -18 0.44 No 20 29.9 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 46191046 - NM_177542 SNRPD2 1 0.01 0.15 10 -20.46 0 16 4 No 55 -0.21 No 23 0.92 Yes -12 0.34 No 53 30.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 46191725 - NM_177542 SNRPD2 1 6.84 0.94 46 6.66 77.97 30 6.7 Yes 17 0.61 No 29 0.91 Yes -29 0.87 Yes 41 84.52 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 46193923 - NM_177542 SNRPD2 1 1.98 0.17 10 1.68 77.86 20 5.57 Yes 7 1.61 Yes 0 0 No -19 0.75 Yes 51 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46193926 - NM_177542 SNRPD2 1 12.05 0.99 43 4.07 81.43 17 5.29 No 4 1.64 Yes 21 0.54 Yes -21 0.54 No 54 77.65 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 46194552 - NM_177542 SNRPD2 1 8.63 0.65 33 -4.2 47.71 34 5.72 Yes 21 0.59 No 0 0 No -19 0.73 Yes 51 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46194718 - NM_177542 SNRPD2 1 1.46 0.13 8 0.46 59.55 28 5.53 No 42 -4.54 No 0 0 No -24 0.47 No 43 51.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 24963933 + NM_004175 SNRPD3 1 0.02 0.14 9 1.99 69.64 45 6.82 Yes -3 0.69 No 23 0.89 Yes -16 0.55 No 54 67 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 203832792 + NM_001328637 SNRPE 1 0.2 1.5 53 -3.58 74.58 64 7.51 Yes 17 1.3 Yes 0 0 No -29 0.93 Yes 41 92.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 203838980 + NM_001328637 SNRPE 1 0.01 0.15 8 2.42 65.02 20 5.1 No 72 -6.66 No 28 0.81 Yes -19 0.74 Yes 46 59.26 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 96255843 + NM_003095 SNRPF 1 0.03 0.17 12 1.09 62.2 47 9.72 Yes -4 1 Yes 0 0 No -22 0.42 No 17 60.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 96259784 + NM_003095 SNRPF 1 0.03 0.14 9 -23.32 0 61 7.21 Yes 74 0 No 0 0 No -29 0.51 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 70511184 - NM_001317169 SNRPG 1 0.02 0.33 14 -2.02 0 30 6.98 Yes 50 0.1 No 0 0 No -29 0.93 Yes 41 96.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 70514504 - NM_001317169 SNRPG 1 0.04 0.6 31 9.16 88.32 23 5.39 No 10 0.47 No 22 0.79 Yes -22 0.76 Yes 48 71.98 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 25212175 + NM_022806 SNRPN 1 2.56 5.19 69 5.12 90.61 10 4.69 No 26 -2.93 No 0 0 No -24 0.81 Yes 46 81.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 25219788 + NM_022806 SNRPN 1 0.23 0.43 24 8.95 94.25 26 5.92 Yes 13 1.3 Yes 0 0 No -25 0.71 Yes 45 90.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 121583605 - NM_021021 SNTB1 1 4.62 0.83 31 8.37 84.24 47 5.72 Yes 74 -2.85 No 27 0.41 Yes -27 0.66 No 43 76.91 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 69243948 + NM_006750 SNTB2 1 0.81 0.18 10 10.62 88.27 28 6.13 Yes 37 2.51 Yes 0 0 No -28 0.59 No 42 63.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69269650 + NM_006750 SNTB2 1 3.85 0.72 35 11.23 95.61 25 5.57 Yes 25 0.59 No 0 0 No -27 0.55 No 46 68.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 69294073 + NM_006750 SNTB2 1 1.54 0.69 32 10.15 89.17 19 6.44 Yes 6 0.39 No 24 0.62 Yes -23 0.63 No 47 79.6 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 69316671 + NM_006750 SNTB2 1 0.25 0.11 7 12.3 96.61 19 4.14 No 67 0.62 No 0 0 No -27 0.89 Yes 43 92.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 69319280 + NM_006750 SNTB2 1 4.22 0.74 33 11.81 88.27 29 6.22 Yes 16 0.91 Yes 0 0 No -28 0.87 Yes 42 83.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42071222 - NM_005008 SNU13 1 0.02 0.19 11 -1.13 65.63 15 3.89 No 57 0.22 No 18 0.54 Yes -23 0.5 No 50 49.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 42073137 - NM_005008 SNU13 1 0.2 1.75 58 9.99 93.58 24 5.48 No 11 0.08 No 0 0 No -23 0.85 Yes 47 86.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 42077564 - NM_005008 SNU13 1 0.41 0.51 28 8.08 88.21 29 6.57 Yes 16 0.86 Yes 28 0.92 Yes -28 0.46 No 42 70.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 42077564 - NM_005008 SNU13 1 0.15 0.19 14 8.08 88.21 29 6.57 Yes 16 0.86 Yes 28 0.92 Yes -28 0.46 No 42 70.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 75891019 - NM_001042588 SNUPN 1 0.35 0.33 19 2.03 0 31 5.41 No 18 0.73 No 0 0 No -35 0.51 No 35 74.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 75893232 - NM_001042588 SNUPN 1 2.28 2.13 60 10.84 85.86 34 5.79 Yes 72 1.07 Yes 0 0 No -29 0.66 No 41 55.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 75893377 - NM_001042588 SNUPN 1 0.23 0.24 15 3.77 65.16 30 4.15 No 17 0.01 No 0 0 No -30 0.89 Yes 40 86.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 78189619 - NM_012245 SNW1 1 0.14 0.29 18 -5.2 74.32 28 5.51 No 15 0.43 No 0 0 No -31 0.83 Yes 39 88.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 78194767 - NM_012245 SNW1 1 0.08 0.17 11 5.5 90.92 28 5.29 No 49 2.13 Yes 0 0 No -27 0.55 No 17 26.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 78203439 - NM_012245 SNW1 1 0.11 0.14 9 3.8 69.63 14 5.13 No 1 0.68 No 22 0.57 Yes -26 0.72 Yes 44 42.98 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 78216083 - NM_012245 SNW1 1 0.07 0.11 7 10.71 86.52 46 6.29 Yes 57 1.91 Yes 0 0 No -24 0.68 Yes 46 80.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64406756 + NM_003099 SNX1 1 0.07 0.26 18 -3.41 79.83 27 6.1 Yes 14 0.8 Yes 0 0 No -26 0.85 Yes 44 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64406761 + NM_003099 SNX1 1 0.07 0.28 17 -4.42 0 32 6.49 Yes 19 0.78 Yes 0 0 No -31 0.79 Yes 39 92.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64407787 + NM_003099 SNX1 1 0.05 0.17 11 4.19 0 33 5.98 Yes 48 -1.94 No 32 0.63 Yes -32 0.89 Yes 38 94.12 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 64410990 + NM_003099 SNX1 1 0.08 0.29 16 -3.95 0 56 7.7 Yes 16 0.99 Yes 0 0 No -28 0.63 No 42 69.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 64422071 + NM_003099 SNX1 1 0.24 0.94 41 4.59 62.28 32 7.21 Yes 9 1.32 Yes 31 0.79 Yes -31 0.55 No 39 76.64 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 64424538 + NM_003099 SNX1 1 0.1 0.36 21 8.8 87.51 21 6.16 Yes 8 2.06 Yes 20 0.91 Yes -20 0.65 No 50 92.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 64427209 + NM_003099 SNX1 1 0.51 1.04 46 8.42 84.95 38 6.16 Yes 25 1.09 Yes 0 0 No -37 0.67 Yes 39 66.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 64429044 + NM_003099 SNX1 1 0.09 0.29 19 -4.21 0 22 5.66 Yes 67 0.74 No 22 0.94 Yes -7 0.24 No 19 22.41 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 64429060 + NM_003099 SNX1 1 0.05 0.18 12 -16.82 0 24 5 No 55 0.41 No 0 0 No -23 0.95 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 64429063 + NM_003099 SNX1 1 0.59 1.93 60 -4.42 0 27 5.29 No 58 0.41 No 0 0 No -26 0.94 Yes 44 89.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64430240 + NM_003099 SNX1 1 1.33 3.75 71 5.56 82.86 29 5.49 No 41 0.12 No 24 0.91 Yes -24 0.78 Yes 46 83.4 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 64435453 + NM_003099 SNX1 1 0.11 0.31 17 6.8 81.11 27 5.74 Yes 14 0.69 No 0 0 No -26 0.87 Yes 44 92.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 26385404 + NM_013322 SNX10 1 0.2 0.11 7 8.7 97.24 24 6.06 Yes 11 0.04 No 0 0 No -24 0.62 No 46 77.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 26392512 + NM_013322 SNX10 1 0.16 0.1 7 -0.74 77.04 40 6.71 Yes 27 0.95 Yes 0 0 No -39 0.68 Yes 31 58.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 26392552 + NM_013322 SNX10 1 0.31 0.17 11 5.19 84.1 22 4.9 No 67 0.95 Yes 0 0 No -21 0.91 Yes 49 94.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 26393676 + NM_013322 SNX10 1 1.3 0.68 28 2.88 79.77 23 4.18 No 21 0.84 Yes 22 0.77 Yes -23 0.73 Yes 47 55.65 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 26396626 + NM_013322 SNX10 1 11.79 6.42 72 7.62 96.71 25 5.1 No 12 0.57 No 24 0.85 Yes -24 0.85 Yes 46 79.92 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 26411495 + NM_013322 SNX10 1 0.34 0.43 23 9.79 88.22 15 5.25 No 2 1.25 Yes 0 0 No -21 0.86 Yes 49 89.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 46188069 + NM_013323 SNX11 1 8.71 6.32 70 3.82 95.78 23 4.8 No 72 -4.06 No 22 0.47 Yes -20 0.52 No 48 58.78 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 46189938 + NM_013323 SNX11 1 0.07 0.14 9 -8.21 72.85 26 5.29 No 13 0.25 No 0 0 No -25 0.82 Yes 45 90.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 46190112 + NM_013323 SNX11 1 0.31 0.93 37 4.64 84.41 23 5.37 No 10 2.01 Yes 22 0.87 Yes -22 0.7 Yes 48 70.44 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 17834255 - NM_015132 SNX13 1 0.26 0.11 7 9.94 87.53 16 4.31 No 3 0.35 No 0 0 No -32 0.75 Yes 38 78.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 17836534 - NM_015132 SNX13 1 0.16 0.1 7 0.82 61.58 36 5.99 Yes 32 -3.59 No 0 0 No -23 0.6 No 47 76.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 17840990 - NM_015132 SNX13 1 0.55 0.21 14 8.27 85.52 19 5.74 Yes 6 0.73 No 0 0 No -18 0.56 No 52 72.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 17841907 - NM_015132 SNX13 1 0.24 0.21 13 4.45 80.04 29 5.48 No 65 -2.02 No 0 0 No -28 0.79 Yes 42 69.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 17843502 - NM_015132 SNX13 1 1.13 0.72 34 11.15 88.27 39 5.88 Yes 26 0.34 No 0 0 No -34 0.51 No 36 52.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 17843662 - NM_015132 SNX13 1 0.22 0.15 9 3.59 89.54 24 4.96 No 0 1.28 Yes 0 0 No -23 0.81 Yes 47 84.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 17861305 - NM_015132 SNX13 1 6.22 4.26 72 2.8 66.78 84 7.02 Yes 43 1.11 Yes 39 0.68 Yes -55 0.86 Yes 15 93.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 17870871 - NM_015132 SNX13 1 0.4 0.18 12 8.17 82.74 35 6.16 Yes -2 1.16 Yes 0 0 No -34 0.76 Yes 36 65.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 17872127 - NM_015132 SNX13 1 0.62 0.32 20 8.97 84.7 17 6.3 Yes 4 1.21 Yes 0 0 No -22 0.73 Yes 48 78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 17878509 - NM_015132 SNX13 1 0.24 0.18 11 6.12 85.79 30 5.49 No 17 0.49 No 0 0 No -29 0.82 Yes 41 82.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 17914917 - NM_015132 SNX13 1 0.89 0.43 25 10.77 88 24 5.48 No 48 0.39 No 0 0 No -30 0.45 No 47 54.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 17920657 - NM_015132 SNX13 1 1.18 1.14 39 4.45 85.12 21 4.65 No 65 0.81 Yes 0 0 No -20 0.9 Yes 50 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 17922567 - NM_015132 SNX13 1 3.43 3.1 70 1.86 0 51 6.64 Yes 43 0.94 Yes 43 0.3 Yes -43 0.7 Yes 27 72.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 17922571 - NM_015132 SNX13 1 0.48 0.4 23 1.81 83.86 47 6.37 Yes 39 0.95 Yes 43 0.3 Yes -39 0.67 Yes 31 73.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 17928412 - NM_015132 SNX13 1 0.31 0.33 20 11.14 93.37 27 5.82 Yes 14 1.58 Yes 0 0 No -26 0.44 No 44 59.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 17931252 - NM_015132 SNX13 1 0.83 0.64 32 -1.81 0 11 2.96 No 17 0.4 No 26 0.92 Yes -33 0.82 Yes 37 89.07 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 17933050 - NM_015132 SNX13 1 0.19 0.13 8 -0.23 0 11 4.12 No 11 0.43 No 0 0 No -36 0.44 No 34 49.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 17937508 - NM_015132 SNX13 1 0.15 0.1 7 6.09 78.54 25 7.13 Yes 12 0.75 No 24 0.93 Yes -24 0.8 Yes 46 87.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 17946964 - NM_015132 SNX13 1 1.89 1.13 45 8.96 76.38 29 5.77 Yes 70 0.87 Yes 28 0.47 Yes -28 0.82 Yes 42 51.21 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 86216975 - NM_001304479 SNX14 1 1.39 1.44 50 3.97 79.54 31 6.48 Yes 18 1.55 Yes 0 0 No -30 0.66 No 40 73.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 86218032 - NM_001304479 SNX14 1 1.24 1.07 50 9.66 93.25 37 6.08 Yes 74 0.53 No 0 0 No -33 0.34 No 38 73.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 86218535 - NM_001304479 SNX14 1 0.12 0.11 7 9.93 89.72 22 5.82 Yes 9 1.42 Yes 0 0 No -32 0.42 No 38 60.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 86220309 - NM_001304479 SNX14 1 0.19 0.17 9 1.04 73.94 27 5.1 No 29 0.76 No 0 0 No -30 0.81 Yes 40 88.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 86227590 - NM_001304479 SNX14 1 0.11 0.13 8 -4.14 0 52 11.54 Yes 33 0.96 Yes 0 0 No -51 0.69 Yes 19 69.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 86231404 - NM_001304479 SNX14 1 0.27 0.25 15 9.47 88.38 34 6.63 Yes 21 0.64 No 0 0 No -33 0.91 Yes 37 90.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 86235944 - NM_001304479 SNX14 1 0.18 0.24 12 0.4 0 20 4.02 No 33 1.56 Yes 0 0 No -45 0.69 Yes 25 92.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 86236760 - NM_001304479 SNX14 1 0.16 0.18 9 7.91 85.44 28 5.29 No 32 0.54 No 0 0 No -27 0.4 No 12 47.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 86253042 - NM_001304479 SNX14 1 0.1 0.17 10 3.12 78.35 27 4.86 No 76 1.1 Yes 21 0.74 Yes -26 0.89 Yes 44 89.32 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 86254045 - NM_001304479 SNX14 1 0.12 0.15 9 11.22 87.84 29 7.07 Yes 54 1.7 Yes 0 0 No -28 0.77 Yes 42 83.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 86257068 - NM_001304479 SNX14 1 0.07 0.1 7 9.74 89.52 33 6.29 Yes 20 1.35 Yes 0 0 No -32 0.65 No 38 77.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 86259454 - NM_001304479 SNX14 1 0.53 0.69 26 4.79 76.88 34 5.66 Yes 21 1.57 Yes 0 0 No -37 0.51 No 33 82.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 86271059 - NM_001304479 SNX14 1 1.69 2 57 4.19 0 36 7.55 Yes 23 2.27 Yes 0 0 No -35 0.93 Yes 35 92.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 86272601 - NM_001304479 SNX14 1 0.12 0.15 10 4.95 83.22 26 4.86 No 23 1.14 Yes 0 0 No -25 0.86 Yes 45 73.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 86274704 - NM_001304479 SNX14 1 0.09 0.11 7 9.07 88.27 25 5.31 No 74 1.75 Yes 0 0 No -24 0.52 No 46 43.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 86279079 - NM_001304479 SNX14 1 0.42 0.38 19 8.2 74.22 24 5.96 Yes 55 -3.64 No 0 0 No -23 0.86 Yes 47 79.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 86282090 - NM_001304479 SNX14 1 10.57 12.54 72 5.89 88.25 19 6.89 Yes 6 0.98 Yes 0 0 No -31 0.39 No 45 58.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 82738695 - NM_022133 SNX16 1 1.33 0.29 16 8.2 96.28 24 4.51 No 28 0.85 Yes 0 0 No -23 0.48 No 47 49.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 27595906 + NR_049782 SNX17 1 1.63 4.33 71 7.36 80.49 22 5.82 Yes 9 1.19 Yes 21 0.88 Yes -21 0.8 Yes 49 88.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 27597516 + NR_049782 SNX17 1 0.15 0.5 25 2.98 78.34 32 7.51 Yes 47 1.38 Yes 36 0.81 Yes -24 0.59 No 46 60.29 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 130778341 - NM_001347921 SNX19 1 1.9 1.64 51 2.79 71.87 93 9.27 Yes 61 1.13 Yes 0 0 No -18 0.32 No 52 33.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 122135389 + NM_001278199 SNX2 1 0.53 1.56 52 -2.03 71.75 25 6.47 Yes 12 1.52 Yes 0 0 No -29 0.54 No 46 57.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 122163270 + NM_001278199 SNX2 1 0.07 0.17 9 -17.82 0 30 6.93 Yes 17 1.67 Yes 0 0 No -29 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 50701953 - NM_153337 SNX20 1 1.54 0.14 8 9.35 82.73 30 6.54 Yes 17 0.76 No 29 0.68 Yes -29 0.65 No 41 70.52 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 50707986 - NM_153337 SNX20 1 608.74 79.38 72 10.02 75.72 26 5.48 No 64 1.09 Yes 25 0.56 Yes -23 0.8 Yes 47 85.95 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 64444833 + NR_073534 SNX22 1 17.41 2.71 62 0.14 70.97 23 4.13 No -3 0.42 No 25 0.8 Yes -22 0.73 Yes 48 49.18 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 64444833 + NR_073534 SNX22 1 19.85 3.07 63 0.14 70.97 23 4.13 No -3 0.42 No 25 0.8 Yes -22 0.73 Yes 48 49.18 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 64445090 + NR_073534 SNX22 1 0.48 0.19 12 4 0 13 4.36 No 24 0.28 No 0 0 No -36 0.3 No 42 47.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 64445121 + NR_073534 SNX22 1 0.52 0.21 14 3.94 73.18 38 6.32 Yes 25 0.55 No 0 0 No -37 0.67 Yes 33 79.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 64446395 + NR_073534 SNX22 1 0.51 0.36 20 6.08 85.06 32 6.16 Yes NA NA NA 0 0 No -32 0.6 No 38 79.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 122182726 + NM_014035 SNX24 1 3.38 0.25 13 8.63 92.12 29 6.39 Yes 16 1.25 Yes 0 0 No -28 0.64 No 42 72.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 122333902 + NM_014035 SNX24 1 2.54 0.39 19 8.69 87.49 62 7.89 Yes 18 1.52 Yes 30 0.77 Yes -30 0.77 Yes 40 77.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 186176836 + NM_001317781 SNX25 1 0.61 1.26 48 7.64 89.55 29 5.86 Yes 64 0.36 No 0 0 No -33 0.65 No 37 87.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 186176860 + NM_001317781 SNX25 1 1.04 2.24 60 7.35 84.66 31 5.74 Yes 18 1.17 Yes 0 0 No -30 0.93 Yes 40 96.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186181890 + NM_001317781 SNX25 1 0.03 0.15 10 7.72 83.51 21 5.97 Yes 8 1.51 Yes 0 0 No -27 0.49 No 50 47.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 186198546 + NM_001317781 SNX25 1 0.69 2.17 61 4.45 76.99 24 5.2 No 67 1.11 Yes 0 0 No -23 0.8 Yes 47 65.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 186203957 + NM_001317781 SNX25 1 6.98 21.82 72 4.63 77.72 91 8.64 Yes 52 0.76 No 0 0 No -24 0.64 No 46 75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 186212917 + NM_001317781 SNX25 1 0.1 0.33 17 11.94 95.81 40 7.13 Yes 32 0.85 Yes 0 0 No -44 0.67 Yes 26 78.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186214279 + NM_001317781 SNX25 1 0.11 0.36 20 7.91 85.71 29 5.56 Yes 16 1.23 Yes 0 0 No -28 0.93 Yes 42 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186231763 + NM_001317781 SNX25 1 0.04 0.13 8 8.39 85.62 49 7.78 Yes 25 1.17 Yes 30 0.94 Yes -37 0.76 Yes 33 68.13 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 186232867 + NM_001317781 SNX25 1 0.57 1.29 45 7.88 82.1 32 5.53 No 34 2.76 Yes 0 0 No -31 0.67 Yes 39 72.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186233697 + NM_001317781 SNX25 1 2.56 5.9 70 4.56 84.41 27 6.15 Yes 38 0.79 Yes 0 0 No -26 0.87 Yes 44 75.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186239924 + NM_001317781 SNX25 1 0.33 0.74 38 10.41 82.88 18 5.46 No 50 0.77 Yes 0 0 No -32 0.36 No 53 56.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 186240057 + NM_001317781 SNX25 1 0.53 1.18 46 7.67 88.91 31 5.62 Yes 25 0.39 No 0 0 No -33 0.63 No 37 60.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 186240060 + NM_001317781 SNX25 1 0.42 0.97 41 6.91 88.88 34 5.88 Yes 28 0.37 No 0 0 No -36 0.57 No 34 50.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 186251839 + NM_001317781 SNX25 1 0.05 0.17 11 7.7 87.81 31 5.92 Yes 76 -2.54 No 0 0 No -26 0.94 Yes 44 94.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 186260513 + NM_001317781 SNX25 1 0.1 0.28 16 6.61 86.41 21 4.56 No 47 0.93 Yes 27 0.54 Yes -20 0.64 No 50 71.72 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 186274641 + NM_001317781 SNX25 1 0.29 0.72 33 -6.29 77.61 22 4.92 No 69 -1.2 No 0 0 No -27 0.6 No 35 65.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 186278628 + NM_001317781 SNX25 1 0.68 1.22 49 7.75 85.24 35 6.89 Yes 22 0.61 No 0 0 No -25 0.44 No 40 64.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 186283057 + NM_001317781 SNX25 1 0.11 0.26 14 -0.19 62.62 38 5.89 Yes 51 0.29 No 27 0.88 Yes -25 0.65 No 45 75.43 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr4 186283345 + NM_001317781 SNX25 1 2.58 6.5 70 11.18 97.18 27 4.38 No 14 0.69 No 0 0 No -26 0.87 Yes 44 87.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 186283775 + NM_001317781 SNX25 1 0.05 0.13 8 1.57 0 21 4.47 No 44 1.09 Yes 0 0 No -21 0.65 No 45 62.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 151640994 + NM_030918 SNX27 1 0.17 0.17 7 5.72 77.49 30 5.74 Yes 68 1.13 Yes 0 0 No -29 0.78 Yes 41 90.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151641616 + NM_030918 SNX27 1 3.22 2.24 53 8.76 86.08 85 7.68 Yes 21 0.41 No 25 0.79 Yes -34 0.56 No 47 74.35 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 151666845 + NM_030918 SNX27 1 0.76 0.13 7 12.97 95.65 24 6.93 Yes 11 1.93 Yes 23 0.7 Yes -23 0.68 Yes 47 73.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 12077422 + NM_032167 SNX29 1 0.76 0.42 23 6.51 77.32 32 6.47 Yes 19 0.59 No 0 0 No -26 0.68 Yes 44 82.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 12088494 + NM_032167 SNX29 1 0.28 0.17 10 7.63 83.46 30 7.06 Yes 17 0.97 Yes 0 0 No -29 0.68 Yes 41 53.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 12088542 + NM_032167 SNX29 1 0.48 0.26 17 2.9 71.3 28 5.18 No 65 0.94 Yes 0 0 No -27 0.74 Yes 43 67.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 12091359 + NM_032167 SNX29 1 1.36 0.75 34 4.6 0 41 5.91 Yes 42 2.03 Yes 0 0 No -26 0.5 No 38 62.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 12096830 + NM_032167 SNX29 1 0.1 0.13 7 -0.57 75.4 18 4.68 No 57 1.14 Yes 22 0.95 Yes -17 0.46 No 31 66.54 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 12099291 + NM_032167 SNX29 1 0.63 0.94 40 7.02 86.92 20 5.1 No 7 0.48 No 0 0 No -19 0.65 No 51 76.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 12100660 + NM_032167 SNX29 1 0.08 0.13 8 6.53 86.16 20 6.63 Yes 7 1.22 Yes 0 0 No -19 0.65 No 51 84.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 12102146 + NM_032167 SNX29 1 0.58 0.94 37 4.86 83 28 5.74 Yes 60 -1.14 No 0 0 No -27 0.92 Yes 43 85.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 12102171 + NM_032167 SNX29 1 0.41 0.61 20 5.5 90.92 28 5.29 No 15 -0.35 No 0 0 No -27 0.77 Yes 18 82.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 12111807 + NM_032167 SNX29 1 0.93 1.33 51 5.39 87.65 26 5.09 No 63 -1.11 No 0 0 No -25 0.85 Yes 45 65.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 12123469 + NM_032167 SNX29 1 0.66 1.1 44 11.44 88.27 34 7.94 Yes 21 1.18 Yes 33 0.45 Yes -20 0.66 No 50 55.56 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 12136645 + NM_032167 SNX29 1 0.3 0.43 22 5.44 81.67 44 7.71 Yes 31 0.77 Yes 0 0 No -43 0.49 No 32 65.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 12136703 + NM_032167 SNX29 1 0.14 0.24 14 9.94 86.14 27 5.57 Yes 48 0.5 No 0 0 No -24 0.63 No 46 75.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 12136755 + NM_032167 SNX29 1 0.1 0.17 12 0.02 74.3 34 5.82 Yes 35 -0.02 No 0 0 No -27 0.74 Yes 43 68.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 12137398 + NM_032167 SNX29 1 0.41 0.43 22 5.92 79 22 7.19 Yes 76 0.56 No 0 0 No -21 0.91 Yes 49 95.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 12138012 + NM_032167 SNX29 1 0.15 0.15 9 3.71 75.88 26 6.47 Yes 13 1.81 Yes 0 0 No -25 0.91 Yes 45 93.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 12141306 + NM_032167 SNX29 1 0.38 0.6 24 8.78 83.96 20 5.73 Yes 7 0.72 No 0 0 No -19 0.89 Yes 51 86.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 12142309 + NM_032167 SNX29 1 0.7 1.13 45 8.59 82.45 22 5.29 No 64 1.23 Yes 0 0 No -21 0.7 Yes 49 69.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 12177201 + NM_032167 SNX29 1 0.84 1.01 40 7.54 92.03 20 7.56 Yes 7 0.53 No 0 0 No -19 0.52 No 31 49.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 12229407 + NM_032167 SNX29 1 3.11 3.74 68 7.35 87.08 27 5.28 No 53 -2.05 No 30 0.46 Yes -30 0.88 Yes 41 82.09 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 12232556 + NM_032167 SNX29 1 0.32 0.39 19 8.03 75.68 26 7.73 Yes 13 1.04 Yes 0 0 No -25 0.89 Yes 45 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 12282624 + NM_032167 SNX29 1 0.22 0.28 16 8.53 81.14 27 5.57 Yes 33 0.13 No 0 0 No -26 0.64 No 46 75.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 12294364 + NM_032167 SNX29 1 0.21 0.26 15 3.37 0 28 7.35 Yes 15 1.38 Yes 0 0 No -27 0.95 Yes 43 97.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 12334079 + NM_032167 SNX29 1 0.79 0.93 41 7.36 84.78 14 5.38 No 34 1.14 Yes 0 0 No -27 0.77 Yes 43 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 12359242 + NM_032167 SNX29 1 0.29 0.36 20 4.51 79.92 24 5.11 No 11 0.79 Yes 0 0 No -23 0.44 No 47 46.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 12477318 + NM_032167 SNX29 1 3.02 2.24 63 6.9 86.06 42 6.32 Yes 29 1.53 Yes 0 0 No -34 0.82 Yes 36 89.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 12525743 + NM_032167 SNX29 1 0.11 0.14 9 10.08 91.09 31 5.92 Yes 37 1.58 Yes 0 0 No -30 0.8 Yes 40 90.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 12536466 + NM_032167 SNX29 1 0.22 0.21 11 10.21 92.06 37 8.24 Yes 24 1.62 Yes 0 0 No -36 0.95 Yes 34 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 12536851 + NM_032167 SNX29 1 0.12 0.14 7 8.35 91.98 34 6.23 Yes 21 0.83 Yes 33 0.64 Yes -24 0.63 No 46 70.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 12542343 + NM_032167 SNX29 1 0.21 0.21 14 10.77 92.63 33 5.9 Yes 58 0.55 No 0 0 No -32 0.55 No 38 52.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 12572561 + NM_032167 SNX29 1 0.15 0.15 10 7.66 82.66 25 5.23 No 0 1.18 Yes 0 0 No -24 0.51 No 43 62.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 12577195 + NM_032167 SNX29 1 0.26 0.24 14 11.13 95.65 27 7.35 Yes 14 0.67 No 0 0 No -26 0.9 Yes 44 93.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 12609365 + NM_032167 SNX29 1 0.28 0.29 14 8.45 83.05 31 6.63 Yes 18 1.17 Yes 0 0 No -30 0.72 Yes 46 63.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 12620406 + NM_032167 SNX29 1 0.71 0.67 28 4.9 82.21 34 7.07 Yes 71 0.16 No 33 0.73 Yes -33 0.71 Yes 37 65.59 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 12654777 + NM_032167 SNX29 1 0.76 0.75 34 0.37 69.02 37 6.08 Yes 5 0.66 No 0 0 No -36 0.7 Yes 34 64.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 108537128 - NM_003795 SNX3 1 0.08 0.22 14 4.77 84.59 31 6.53 Yes 18 1.06 Yes 0 0 No -30 0.71 Yes 40 83.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 108543525 - NM_003795 SNX3 1 0.18 0.58 29 8.77 86.7 23 5.42 No 70 1.45 Yes 22 0.96 Yes -22 0.97 Yes 48 95.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 108557897 - NM_003795 SNX3 1 0.05 0.13 8 8.73 84.08 24 5.48 No 75 0.69 No 0 0 No -23 0.81 Yes 47 80.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125168100 - NM_003794 SNX4 1 0.09 0.15 10 8.43 90.65 23 6.76 Yes 10 1.77 Yes 22 0.89 Yes -22 0.78 Yes 48 86.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 125168256 - NM_003794 SNX4 1 2.2 4.67 69 3.01 0 46 7.21 Yes 33 1.06 Yes 0 0 No -45 0.87 Yes 25 85.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 125168260 - NM_003794 SNX4 1 0.08 0.17 11 1.86 84.41 42 6.93 Yes 29 1.08 Yes 0 0 No -41 0.83 Yes 29 86.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 125186966 - NM_003794 SNX4 1 0.14 0.15 9 6.62 75.77 37 6.86 Yes 59 1.13 Yes 0 0 No -36 0.71 Yes 34 80.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 125189506 - NM_003794 SNX4 1 10.09 11.15 71 6.9 90.31 72 7.77 Yes 47 1.48 Yes 0 0 No -36 0.5 No 34 69.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 125208304 - NM_003794 SNX4 1 0.08 0.28 16 2.56 0 24 4.99 No 11 0.13 No 0 0 No -27 0.8 Yes 43 80.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125212471 - NM_003794 SNX4 1 0.06 0.18 11 5.25 76.79 27 5.2 No 14 0.76 No 0 0 No -26 0.81 Yes 11 77.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125212489 - NM_003794 SNX4 1 0.04 0.14 8 -11.46 72.63 48 6.66 Yes 35 0.71 No 0 0 No -41 0.87 Yes 29 89.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125216824 - NM_003794 SNX4 1 0.93 2.57 63 1.17 0 23 4.99 No 13 0.52 No 0 0 No -26 0.69 Yes 44 62.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 125230075 - NM_003794 SNX4 1 0.13 0.22 14 7.4 90.82 18 4.2 No 5 0.94 Yes 0 0 No -28 0.84 Yes 42 83.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 17923031 - NM_001282454 SNX5 1 0.18 1.03 43 11.19 88.96 18 3.88 No 39 0.84 Yes 0 0 No -25 0.48 No 45 56.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 17923796 - NM_001282454 SNX5 1 0.04 0.17 12 -13.45 0 20 3.21 No 52 0.33 No 0 0 No -39 0.45 No 60 34.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 17924789 - NM_001282454 SNX5 1 0.22 0.9 36 10.15 88.24 27 5.8 Yes 14 1.49 Yes 29 0.84 Yes -29 0.6 No 44 64.89 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 17928787 - NM_001282454 SNX5 1 0.36 2.64 64 6.84 85.21 29 4.78 No 2 0.53 No 0 0 No -28 0.56 No 46 43.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 17929614 - NM_001282454 SNX5 1 0.02 0.13 8 -7.29 0 14 4 No 15 1.88 Yes 0 0 No -27 0.72 Yes 43 70.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 17929620 - NM_001282454 SNX5 1 0.04 0.26 18 -12.67 0 22 6.33 Yes 9 1.91 Yes 0 0 No -21 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 17930851 - NM_001282454 SNX5 1 0.04 0.39 24 -12.49 0 27 5.48 No 37 0.89 Yes 0 0 No -29 0.38 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 17930872 - NM_001282454 SNX5 1 0.05 0.43 23 -0.72 61.8 29 5.65 Yes 16 0.86 Yes 25 0.65 Yes -28 0.84 Yes 42 86.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 17931972 - NM_001282454 SNX5 1 0.62 2.6 63 7.42 86.42 39 5.49 No 26 1.27 Yes 24 0.9 Yes -24 0.89 Yes 46 93.76 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 17932860 - NM_001282454 SNX5 1 0.05 0.21 13 2.87 0 28 8.63 Yes 15 1.2 Yes 0 0 No -27 0.56 No 43 57.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 17933895 - NM_001282454 SNX5 1 0.03 0.15 9 6.21 79.69 41 5.16 No 43 1.39 Yes 0 0 No -55 0.51 No 37 60.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 17934868 - NM_001282454 SNX5 1 2.29 14.03 72 1.77 0 14 4.08 No 53 -5.63 No 20 0.35 Yes -20 0.6 No 50 79.19 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 17934868 - NM_001282454 SNX5 1 0.13 0.75 33 1.77 0 14 4.08 No 53 -5.63 No 20 0.35 Yes -20 0.6 No 50 79.19 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 17934876 - NM_001282454 SNX5 1 1.25 7.67 72 0.32 69.09 13 4.9 No 45 -5.12 No 20 0.35 Yes -22 0.26 No 53 28.51 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 17934876 - NM_001282454 SNX5 1 0.07 0.42 24 0.32 69.09 13 4.9 No 45 -5.12 No 20 0.35 Yes -22 0.26 No 53 28.51 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 17935256 - NM_001282454 SNX5 1 0.07 0.46 22 8.75 95.97 32 5.78 Yes 61 0.81 Yes 0 0 No -31 0.83 Yes 39 71.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 17935308 - NM_001282454 SNX5 1 0.07 0.5 27 6.66 89.15 22 5.99 Yes 9 0.81 Yes 0 0 No -29 0.81 Yes 41 75.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 35034595 - NM_152233 SNX6 1 0.04 0.13 8 9.76 89.4 28 7.49 Yes 72 0.59 No 0 0 No -27 0.65 No 43 67.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 35036969 - NM_152233 SNX6 1 0.25 0.58 28 -0.05 0 14 4.24 No 12 1.2 Yes 0 0 No -34 0.42 No 40 40.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 35060432 - NM_152233 SNX6 1 0.04 0.11 7 6.47 92.54 20 5.1 No 7 0.21 No 0 0 No -23 0.54 No 51 72.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 35073381 - NM_152233 SNX6 1 0.14 0.31 20 3.81 79.31 85 9.29 Yes 5 0.97 Yes 21 0.85 Yes -21 0.81 Yes 30 80.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 35073475 - NM_152233 SNX6 1 1.01 2.24 62 5.75 72.2 28 6.56 Yes 15 1.09 Yes 27 0.89 Yes -27 0.89 Yes 43 89.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 35093838 - NM_152233 SNX6 1 0.07 0.11 7 3.6 85.02 17 5.29 No 4 1.05 Yes 0 0 No -16 0.47 No 54 73.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 35099157 - NM_152233 SNX6 1 0.82 0.44 25 -3.89 0 72 9.45 Yes 59 2.35 Yes 39 0.53 Yes -43 0.8 Yes 27 67.71 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 2296656 - NM_013321 SNX8 1 2.17 3.49 70 2.56 84.6 27 5.57 Yes 71 -1.28 No 0 0 No -26 0.74 Yes 44 60.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 2297430 - NM_013321 SNX8 1 0.16 0.33 19 -4.72 0 12 4.24 No 17 0.66 No 0 0 No -29 0.77 Yes 41 81.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2297457 - NM_013321 SNX8 1 0.18 0.33 17 -5.2 55.69 22 6.48 Yes 76 -3.91 No 20 0.59 Yes -21 0.66 No 49 41.95 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 2304249 - NM_013321 SNX8 1 0.05 0.11 7 4.55 80.52 34 5.05 No 18 0.85 Yes 0 0 No -30 0.57 No 40 74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 2314005 - NM_013321 SNX8 1 0.09 0.18 9 8.2 82.66 25 5.98 Yes 68 1.17 Yes 0 0 No -24 0.83 Yes 46 90.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2320106 - NM_013321 SNX8 1 0.15 0.11 8 3.01 0 31 6.23 Yes 12 0.66 No 0 0 No -30 0.78 Yes 40 93.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 2329972 - NM_013321 SNX8 1 0.56 0.38 21 4.95 79.63 20 6.82 Yes 7 1.23 Yes 0 0 No -19 0.73 Yes 51 86.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158297200 + NM_016224 SNX9 1 0.88 0.63 28 2.18 75.44 35 4.71 No 22 0.39 No 0 0 No -34 0.78 Yes 36 76.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 158362271 + NM_016224 SNX9 1 0.28 0.21 11 4.22 87.16 21 4.41 No 43 -1.39 No 0 0 No -21 0.58 No 49 71.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 158362290 + NM_016224 SNX9 1 0.75 0.49 23 7.17 78.49 29 5.29 No 62 -1.37 No 0 0 No -28 0.83 Yes 42 90.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 179276187 + NM_003101 SOAT1 1 0.1 0.18 11 6.72 80.47 28 3.96 No 76 0.15 No 0 0 No -31 0.59 No 39 53.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 179291542 + NM_003101 SOAT1 1 0.12 0.21 14 3.19 0 43 7.38 Yes 30 1.55 Yes 0 0 No -42 0.79 Yes 28 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179311144 + NM_003101 SOAT1 1 0.56 0.83 42 5.34 81.97 39 4.87 No 50 0.45 No 27 0.67 Yes -35 0.35 No 35 32.54 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 179319411 + NM_003101 SOAT1 1 0.12 0.17 10 5.14 71.62 40 8.79 Yes 27 0.48 No 28 0.59 Yes -24 0.54 No 46 44 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 55498521 + NM_199421 SOCS4 1 13.35 6.06 72 7.24 89.11 24 4.99 No 11 0.53 No 0 0 No -24 0.65 No 46 82.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 55498558 + NM_199421 SOCS4 1 2.2 1.07 41 6.01 77.38 35 5.27 No 48 0.54 No 24 0.71 Yes -22 0.35 No 48 76.66 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 55498606 + NM_199421 SOCS4 1 6.83 2.99 67 6.57 86.17 21 5.65 Yes 8 0.46 No 29 0.52 Yes -20 0.7 Yes 50 87.35 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 55502576 + NM_199421 SOCS4 1 2.3 1.03 44 11.76 95.65 31 6 Yes 18 0.45 No 0 0 No -31 0.65 No 39 71.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 67981330 + NM_004232 SOCS6 1 8.6 0.5 27 6.64 74.07 35 6.1 Yes 61 0.79 Yes 0 0 No -34 0.6 No 36 66.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 36525050 + NM_014598 SOCS7 1 0.85 0.28 17 8.32 87.02 18 5.12 No 59 0.84 Yes 0 0 No -24 0.74 Yes 46 87.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33032867 + NM_000454 SOD1 1 0.03 0.17 9 6.62 73.64 28 5.39 No 15 0.4 No 0 0 No -27 0.76 Yes 43 76.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 33036107 + NM_000454 SOD1 1 0.02 0.11 7 -6.26 0 26 6.17 Yes 48 0.34 No 0 0 No -26 0.54 No 44 67.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 33040759 + NM_000454 SOD1 1 0.01 0.14 8 -6.51 0 12 3.18 No 72 1 Yes 22 0.62 Yes -11 0.46 No 16 49.33 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 160100331 - NM_001322819 SOD2 1 0.29 0.36 21 10.72 88.96 34 5.73 Yes 6 0.64 No 25 0.78 Yes -25 0.73 Yes 45 79.62 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 160100331 - NM_001322819 SOD2 1 0.19 0.22 15 10.72 88.96 34 5.73 Yes 6 0.64 No 25 0.78 Yes -25 0.73 Yes 45 79.62 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 35425971 - NM_080627 SOGA1 1 2.04 0.88 35 0.26 0 9 3.87 No 23 0.89 Yes 0 0 No -31 0.8 Yes 39 77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35433341 - NM_080627 SOGA1 1 0.32 0.21 11 10.05 82.41 29 5.48 No 16 1.08 Yes 26 0.91 Yes -28 0.84 Yes 42 70.93 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 34919306 + NR_103797 SON 1 0.11 0.61 33 4.17 0 49 7.07 Yes 36 1.24 Yes 44 0.59 Yes -48 0.75 Yes 26 84.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 34922525 + NR_103797 SON 1 0.06 0.32 19 3.1 76.66 34 4.23 No 68 -5.45 No 0 0 No -20 0.63 No 50 49.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 34929851 + NR_103797 SON 1 28.03 103.56 72 8.15 91.08 32 5.74 Yes 19 0.94 Yes 31 0.89 Yes -25 0.5 No 45 61.84 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 34929857 + NR_103797 SON 1 0.04 0.15 11 3.39 0 9 3.87 No 25 0.94 Yes 0 0 No -27 0.41 No 39 67.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 34932182 + NR_103797 SON 1 9.98 28.6 72 9.52 83.8 28 9.49 Yes 46 0.91 Yes 27 0.93 Yes -27 0.89 Yes 43 89.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 34933381 + NR_103797 SON 1 0.09 0.31 17 8.28 85.94 37 6.87 Yes 24 1.88 Yes 0 0 No -36 0.65 No 34 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 34941529 + NR_103797 SON 1 0.94 0.19 11 5.11 86.18 26 6 Yes 61 -5.66 No 0 0 No -30 0.5 No 40 67.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 34944056 + NR_103797 SON 1 3.49 0.75 34 8.43 85.15 14 4.77 No 34 -2.31 No 30 0.58 Yes -20 0.62 No 50 87.93 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr21 34946942 + NR_103797 SON 1 0.05 0.19 12 4.69 83.11 23 6.24 Yes 41 -3.58 No 0 0 No -22 0.95 Yes 48 96.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 34948670 + NR_103797 SON 1 46.57 106.18 72 9.58 88.7 34 6.34 Yes 21 0.87 Yes 22 0.93 Yes -22 0.69 Yes 48 67.46 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 45353179 + NM_003104 SORD 1 0.94 1.22 43 7.69 82.15 28 6.56 Yes 15 1.07 Yes 30 0.66 Yes -30 0.65 No 43 63.37 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 45357459 + NM_003104 SORD 1 0.16 0.18 10 -2.81 0 28 5.27 No 15 0.58 No 32 0.75 Yes -27 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 45362056 + NM_003104 SORD 1 1.15 1.19 34 9.89 91.11 25 5.97 Yes 12 1.63 Yes 24 0.95 Yes -24 0.82 Yes 46 89.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 121328343 + NM_003105 SORL1 1 0.37 0.53 28 7.59 98.16 17 5.02 No 75 0.63 No 0 0 No -26 0.68 Yes 44 46.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 121357051 + NM_003105 SORL1 1 2.07 4.92 70 7.6 94.61 12 5.45 No 34 1.06 Yes 0 0 No -31 0.76 Yes 42 82.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121370609 + NM_003105 SORL1 1 0.13 0.17 10 10.17 89.36 21 6.61 Yes 8 1.67 Yes 0 0 No -27 0.74 Yes 43 78.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121380367 + NM_003105 SORL1 1 0.97 1.63 54 4.57 85.02 17 5.29 No 4 1.11 Yes 0 0 No -21 0.56 No 54 68.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 121380370 + NM_003105 SORL1 1 0.42 0.65 31 2.65 83.01 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.62 No 51 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 121386840 + NM_003105 SORL1 1 0.27 0.25 14 8.8 95.97 21 5.67 Yes 8 1.12 Yes 0 0 No -20 0.85 Yes 50 82.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121403439 + NM_003105 SORL1 1 0.81 1.83 51 9.94 88.87 27 5.2 No 34 0.75 No 0 0 No -26 0.49 No 19 60.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 121406070 + NM_003105 SORL1 1 0.82 1.89 57 1.94 81 17 4.8 No 75 1.29 Yes 0 0 No -22 0.78 Yes 48 66.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 121414135 + NM_003105 SORL1 1 0.07 0.15 8 6.3 76.57 30 4.16 No 17 1.05 Yes 0 0 No -29 0.72 Yes 41 79.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121414262 + NM_003105 SORL1 1 0.09 0.18 12 -5.81 0 16 2.49 No 10 0.76 No 0 0 No -34 0.86 Yes 36 90.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 121414336 + NM_003105 SORL1 1 0.09 0.21 13 8.28 83.21 34 5.74 Yes 31 0.73 No 0 0 No -33 0.65 No 44 64.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 121415954 + NM_003105 SORL1 1 0.05 0.1 7 -12.34 80.08 34 8.19 Yes 21 1.52 Yes 0 0 No -33 0.95 Yes 37 95.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121417571 + NM_003105 SORL1 1 0.4 0.46 28 7.71 79.71 24 3.91 No 12 -3.07 No 24 0.82 Yes -24 0.86 Yes 46 74.83 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 121424648 + NM_003105 SORL1 1 0.14 0.29 15 -2.13 64.01 33 7.27 Yes 72 -3.38 No 0 0 No -32 0.51 No 38 70.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 121428026 + NM_003105 SORL1 1 0.25 0.71 34 1.81 0 32 6.14 Yes 19 1.15 Yes 0 0 No -31 0.87 Yes 39 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121432797 + NM_003105 SORL1 1 0.08 0.14 9 7.01 80.92 36 6.32 Yes 48 2.35 Yes 0 0 No -30 0.67 Yes 35 63.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 121437378 + NM_003105 SORL1 1 0.53 1.07 37 9.79 90.69 30 6 Yes 34 2.21 Yes 0 0 No -29 0.84 Yes 41 91.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121439613 + NM_003105 SORL1 1 0.28 0.46 22 7.7 82.68 34 5.72 Yes 75 1.17 Yes 0 0 No -26 0.6 No 44 59.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 121449104 + NM_003105 SORL1 1 0.11 0.22 12 10.88 84.94 18 7.41 Yes 5 1.48 Yes 0 0 No -25 0.85 Yes 45 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121456935 + NM_003105 SORL1 1 0.07 0.13 7 -7.07 0 61 5.14 No 48 0.89 Yes 0 0 No -35 0.93 Yes 35 92.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121460749 + NM_003105 SORL1 1 0.05 0.13 7 -16.92 0 24 6.04 Yes 35 -2.22 No 0 0 No -23 0.83 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 121461776 + NM_003105 SORL1 1 0.05 0.11 7 2.73 79.76 64 8.68 Yes 51 0.86 Yes 0 0 No -29 0.44 No 41 39.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 121462757 + NM_003105 SORL1 1 0.06 0.21 11 9 97.96 19 6.13 Yes 6 0.64 No 0 0 No -26 0.66 Yes 44 51.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 121477898 + NM_003105 SORL1 1 0.11 0.29 18 2.56 0 29 8.14 Yes 16 1.58 Yes 0 0 No -28 0.96 Yes 42 98.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121480122 + NM_003105 SORL1 1 0.37 1.44 51 6.38 74.72 28 6.56 Yes 39 1.09 Yes 0 0 No -27 0.86 Yes 43 74.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121482181 + NM_003105 SORL1 1 0.06 0.19 11 7.5 82.15 30 5.83 Yes -4 0.77 Yes 0 0 No -29 0.89 Yes 41 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121487968 + NM_003105 SORL1 1 0.07 0.21 11 1.39 0 18 4.47 No 54 1.37 Yes 0 0 No -17 0.88 Yes 53 87.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 121495886 + NM_003105 SORL1 1 0.12 0.42 24 3.61 76.49 30 7.67 Yes 5 0 No 0 0 No -29 0.84 Yes 41 82.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 121498269 + NM_003105 SORL1 1 1.37 2.35 60 0.45 0 16 3.87 No 52 0.04 No 0 0 No -31 0.93 Yes 39 81.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 39225752 - NM_005633 SOS1 1 0.65 0.49 26 11.79 88.9 30 5.82 Yes 32 1.13 Yes 0 0 No -29 0.91 Yes 41 97.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 39251276 - NM_005633 SOS1 1 1.11 0.42 26 2.21 75.58 28 4.85 No 58 0.37 No 0 0 No -27 0.75 Yes 43 79.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 39260343 - NM_005633 SOS1 1 0.65 0.26 17 2.68 75.86 43 6.22 Yes 30 1.42 Yes 0 0 No -42 0.96 Yes 28 97.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 39262000 - NM_005633 SOS1 1 0.38 0.15 10 3.47 82.59 57 8.97 Yes 24 1.26 Yes 23 0.56 Yes -23 0.52 No 34 51.06 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 39262445 - NM_005633 SOS1 1 0.82 0.56 26 1.26 0 10 4 No 66 0.56 No 0 0 No -38 0.82 Yes 32 72.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 39302604 - NM_005633 SOS1 1 0.66 0.18 10 9.64 85.17 36 7.65 Yes 23 1.96 Yes 0 0 No -35 0.9 Yes 35 91.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50585524 - NM_006939 SOS2 1 0.52 0.24 15 -1.04 0 33 6.41 Yes 20 0.94 Yes 0 0 No -32 0.74 Yes 38 81.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50599696 - NM_006939 SOS2 1 0.23 0.14 7 8.86 85.72 21 6.8 Yes 33 0.76 No 0 0 No -27 0.56 No 36 27.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50611507 - NM_006939 SOS2 1 0.3 0.17 8 9.34 83.03 20 5.47 No 7 0.49 No 0 0 No -24 0.61 No 46 43.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50615125 - NM_006939 SOS2 1 1.35 0.6 26 4.74 84.41 27 6.31 Yes 31 1.76 Yes 0 0 No -26 0.38 No 39 50.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 50625309 - NM_006939 SOS2 1 0.92 0.63 32 6.13 84.13 31 6.69 Yes 18 0.59 No 0 0 No -30 0.93 Yes 40 92.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 50626803 - NM_006939 SOS2 1 0.2 0.14 8 -2.72 83.21 31 4.54 No 14 0.38 No 0 0 No -20 0.38 No 44 59.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50649264 - NM_006939 SOS2 1 0.61 0.21 12 6.05 73.56 17 6.17 Yes 70 1.61 Yes 0 0 No -24 0.53 No 46 79.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 50662064 - NM_006939 SOS2 1 0.29 0.13 7 6.91 80.63 14 5.14 No 64 1.14 Yes 0 0 No -26 0.87 Yes 44 91.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50662864 - NM_006939 SOS2 1 2.68 1.21 47 9.38 83.46 29 5.54 No 16 1.23 Yes 0 0 No -28 0.8 Yes 42 92.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 50682151 - NM_006939 SOS2 1 1.39 0.29 16 7.85 81.49 25 7.39 Yes 12 1 Yes 24 0.66 Yes -24 0.83 Yes 46 64.38 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 50690389 - NM_006939 SOS2 1 0.86 0.17 10 11.1 86.79 27 6.16 Yes 72 1.51 Yes 0 0 No -26 0.86 Yes 44 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53776037 + NM_003109 SP1 1 7.43 7.75 71 3.73 81.81 27 3.9 No 68 -5.26 No 21 0.96 Yes -21 0.92 Yes 49 93.45 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 53794402 + NM_003109 SP1 1 0.18 0.17 11 0.24 0 54 7.35 Yes 44 0.52 No 0 0 No -40 0.83 Yes 30 91.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231314028 + NM_001206704 SP100 1 0.76 3.83 69 7.59 86.44 20 4.78 No 7 0.56 No 19 0.84 Yes -19 0.64 No 51 62.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 231314864 + NM_001206704 SP100 1 0.07 0.32 20 1.35 73.91 20 5.04 No 72 -5.76 No 24 0.94 Yes -23 0.59 No 47 29.08 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 231322417 + NM_001206704 SP100 1 0.12 0.56 27 9.1 89.18 66 7.89 Yes 45 0.91 Yes 0 0 No -34 0.78 Yes 36 78.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231327871 + NM_001206704 SP100 1 0.1 0.39 18 9.51 81.34 19 5.04 No 35 0.18 No 0 0 No -21 0.42 No 49 28.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 231328122 + NM_001206704 SP100 1 0.09 0.35 18 11.74 83.69 26 6.45 Yes 13 0.79 Yes 0 0 No -25 0.83 Yes 45 81.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231328761 + NM_001206704 SP100 1 0.06 0.25 12 -4.23 0 13 4.36 No 24 1.19 Yes 23 0.85 Yes -36 0.3 No 15 55.67 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 231331803 + NM_001206704 SP100 1 0.03 0.15 9 -11.67 67.74 27 6.83 Yes 14 1.79 Yes 25 0.9 Yes -26 0.83 Yes 44 82.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 231331840 + NM_001206704 SP100 1 0.04 0.14 8 -0.51 0 10 3.64 No 51 1.77 Yes 0 0 No -31 0.65 No 44 63.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 231334493 + NM_001206704 SP100 1 0.17 0.44 25 4.54 78.72 31 6.22 Yes 67 0.01 No 26 0.82 Yes -26 0.77 Yes 44 87.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 231042931 - NM_001185015 SP110 1 0.04 0.1 7 4.19 73.62 27 6.08 Yes 57 1.01 Yes 0 0 No -26 0.94 Yes 44 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231043171 - NM_001185015 SP110 1 0.14 0.32 20 7.82 85.29 24 7.21 Yes 11 1.11 Yes 0 0 No -23 0.58 No 43 56.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 231048181 - NM_001185015 SP110 1 0.7 1.53 49 7.13 73.73 41 7.28 Yes NA NA NA 0 0 No -40 0.59 No 30 83.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 231050854 - NM_001185015 SP110 1 0.31 0.47 26 -4.08 0 9 3.87 No 21 0.62 No 0 0 No -25 0.81 Yes 45 67.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 231050874 - NM_001185015 SP110 1 0.08 0.11 7 -1.92 58.09 18 5.01 No 1 0.37 No 19 0.82 Yes -17 0.79 Yes 53 78.95 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 231054572 - NM_001185015 SP110 1 0.49 0.79 35 8.44 92.48 22 4.93 No 71 -5.02 No 0 0 No -21 0.56 No 49 78.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 231057644 - NM_001185015 SP110 1 0.15 0.25 17 -16.36 0 17 4.02 No 68 -3.66 No 0 0 No -24 0.43 No 40 54.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 231063082 - NM_001185015 SP110 1 0.06 0.11 7 9.24 85.23 20 5.74 Yes 57 1.93 Yes 0 0 No -26 0.71 Yes 44 77.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231063752 - NM_001185015 SP110 1 0.17 0.26 17 5.96 80.97 30 7.07 Yes 17 0.48 No 0 0 No -29 0.96 Yes 41 96.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231067439 - NM_001185015 SP110 1 0.1 0.18 11 -5 0 9 3.87 No 15 0.63 No 21 0.94 Yes -27 0.88 Yes 43 82.83 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 231068080 - NM_001185015 SP110 1 0.09 0.14 9 8.46 93.92 25 5.29 No 17 1.35 Yes 29 0.77 Yes -29 0.79 Yes 41 72.87 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 231073554 - NM_001185015 SP110 1 0.24 0.35 18 9.8 78.25 31 7.21 Yes 67 1.27 Yes 0 0 No -31 0.78 Yes 39 80.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231080339 - NM_001185015 SP110 1 0.04 0.1 7 9.39 83.36 42 6.83 Yes 66 1.06 Yes 0 0 No -45 0.41 No 29 49.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 231084728 - NM_001185015 SP110 1 4.37 1.32 51 4.49 79.02 20 7.61 Yes 7 0.8 Yes 26 0.42 Yes -28 0.39 No 51 49.13 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 231088998 - NM_001185015 SP110 1 2.7 0.69 35 12.63 82.16 34 6.32 Yes NA NA NA 0 0 No -33 0.87 Yes 37 90.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231090772 + NM_007237 SP140 1 0.4 0.58 32 6.64 94.3 19 4.59 No 73 0.57 No 0 0 No -29 0.7 Yes 48 39.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 231097528 + NM_007237 SP140 1 0.08 0.1 7 0.27 64.38 46 8.1 Yes 33 1.04 Yes 0 0 No -45 0.87 Yes 25 96.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231099652 + NM_007237 SP140 1 2.99 4.67 66 9.12 81.15 47 7.66 Yes 59 1.28 Yes 28 0.89 Yes -28 0.96 Yes 42 95.58 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 231103475 + NM_007237 SP140 1 0.41 0.81 38 6.38 83.32 22 5.58 Yes 69 1.02 Yes 28 0.7 Yes -28 0.8 Yes 42 86.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 231103475 + NM_007237 SP140 1 16.04 34.83 72 6.38 83.32 22 5.58 Yes 69 1.02 Yes 28 0.7 Yes -28 0.8 Yes 42 86.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 231108415 + NM_007237 SP140 1 0.33 0.47 25 -1.56 55.8 46 7.71 Yes 33 0.82 Yes 23 0.87 Yes -45 0.92 Yes 25 90.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 231111963 + NM_007237 SP140 1 0.99 1.31 50 8.67 86.57 30 5.83 Yes 61 0.82 Yes 0 0 No -29 0.64 No 41 83.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 231112636 + NM_007237 SP140 1 0.1 0.14 9 1.76 0 15 3.87 No 2 0.68 No 0 0 No -30 0.77 Yes 40 87.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231117181 + NM_007237 SP140 1 0.18 0.1 7 -14.6 0 9 3.87 No 76 -6.06 No 0 0 No -6 0.14 No 49 41.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 231118048 + NM_007237 SP140 1 1 0.61 22 8.58 93.38 21 5.2 No 42 0.74 No 0 0 No -20 0.62 No 50 85.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 231113802 + NM_007237 SP140 1 0.25 0.13 8 4.73 76.15 39 5.91 Yes 6 -0.9 No 0 0 No -33 0.54 No 37 67.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 231117200 + NM_007237 SP140 1 0.29 0.18 11 -24.29 0 14 3.79 No 67 -5.36 No 0 0 No -13 0.23 No 60 41.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 231118048 + NM_007237 SP140 1 0.35 0.22 14 8.58 93.38 21 5.2 No 42 0.74 No 0 0 No -20 0.62 No 50 85.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 231118048 + NM_007237 SP140 1 21.04 12.33 72 8.58 93.38 21 5.2 No 42 0.74 No 0 0 No -20 0.62 No 50 85.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 231134608 + NM_007237 SP140 1 0.38 0.38 20 7.99 83.18 31 5.53 No 1 0.39 No 34 0.12 Yes -30 0.59 No 42 37.47 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 231135713 + NM_007237 SP140 1 0.19 0.21 13 4.38 85.13 24 5.18 No 8 -2.28 No 0 0 No -23 0.91 Yes 47 87.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231156832 + NM_007237 SP140 1 0.08 0.14 8 3.86 83.41 24 4.99 No 71 0.84 Yes 0 0 No -23 0.7 Yes 47 78.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231163824 + NM_007237 SP140 1 0.09 0.11 7 6.39 82.57 20 5.74 Yes 7 1.87 Yes 0 0 No -19 0.87 Yes 51 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231171744 + NM_007237 SP140 1 0.1 0.14 8 6.86 72.06 29 4.76 No 28 0.75 No 0 0 No -28 0.64 No 42 66.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 231175200 + NM_007237 SP140 1 0.12 0.14 9 6.3 80.18 30 5.48 No 17 1.19 Yes 0 0 No -29 0.86 Yes 41 90 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231175484 + NM_007237 SP140 1 1.28 1.31 46 7.37 91.62 30 5.99 Yes 35 1.91 Yes 0 0 No -29 0.82 Yes 41 51.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 231235571 + NM_001308162 SP140L 1 3.6 1.61 55 -0.15 67.22 36 4.13 No 37 -2.43 No 0 0 No -28 0.82 Yes 42 82.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231236727 + NM_001308162 SP140L 1 1.28 0.67 34 3.46 81.54 24 5.18 No -3 0.17 No 0 0 No -23 0.9 Yes 47 87.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231243036 + NM_001308162 SP140L 1 0.31 0.19 10 8.11 88.74 21 5.1 No 65 0.51 No 0 0 No -26 0.86 Yes 44 86.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 231256429 + NM_001308162 SP140L 1 1.82 0.67 31 7.17 81.57 32 4.74 No 53 0.6 No 31 0.82 Yes -31 0.5 No 39 77.66 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 231264079 + NM_001308162 SP140L 1 0.57 0.17 10 9.41 82.54 21 5.72 Yes 8 0.88 Yes 0 0 No -24 0.93 Yes 46 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 231265029 + NM_001308162 SP140L 1 1.09 0.36 21 5.49 77.9 37 6.26 Yes 53 0.61 No 24 0.76 Yes -36 0.33 No 52 34.29 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 231265048 + NM_001308162 SP140L 1 5.6 1.86 58 5.61 75.98 25 5.29 No 72 0.61 No 24 0.76 Yes -24 0.89 Yes 46 84.28 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 231265696 + NM_001308162 SP140L 1 6.98 2.42 64 7.37 91.62 30 5.99 Yes 35 1.91 Yes 0 0 No -29 0.82 Yes 41 51.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 174772694 - NM_001172712 SP3 1 1.38 3.08 66 9.79 97.96 26 5.57 Yes 13 0.25 No 0 0 No -25 0.73 Yes 45 52.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 174777993 - NM_001172712 SP3 1 0.2 0.61 34 0.64 86.64 33 5.15 No 45 1.33 Yes 0 0 No -27 0.4 No 33 46.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 174779308 - NM_001172712 SP3 1 0.22 0.64 28 3.8 69.48 89 9.82 Yes 76 1.38 Yes 0 0 No -25 0.59 No 45 42.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 174793857 - NM_001172712 SP3 1 0.31 0.6 21 2.9 72.46 32 6.78 Yes 19 0.06 No 0 0 No -31 0.89 Yes 39 94.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 174798963 - NM_001172712 SP3 1 0.13 0.26 16 10.4 88.27 26 5.12 No 57 1.18 Yes 0 0 No -25 0.74 Yes 45 72.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 174799140 - NM_001172712 SP3 1 0.79 1.47 49 8.48 91.2 83 8.84 Yes 70 1.17 Yes 0 0 No -23 0.85 Yes 47 84.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 174820957 - NM_001172712 SP3 1 0.33 0.44 22 5.77 0 28 8.05 Yes 15 0.6 No 23 0.66 Yes -30 0.59 No 43 66.73 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 174828612 - NM_001172712 SP3 1 603.74 36.28 72 3.31 66.13 53 8.66 Yes 40 2.81 Yes 20 0.78 Yes -52 0.9 Yes 18 94.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 174829271 - NM_001172712 SP3 1 1.92 0.93 39 -2.7 0 19 3.84 No NA NA NA 0 0 No -58 0.31 No 14 38.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 21468915 + NM_001326542 SP4 1 1.09 0.63 31 -5.84 0 18 3.94 No 52 1.99 Yes 0 0 No -28 0.75 Yes 15 30.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 21468940 + NM_001326542 SP4 1 3.35 1.85 53 7.84 78.17 28 5.83 Yes 15 1.26 Yes 0 0 No -27 0.93 Yes 43 95.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 21521119 + NM_001326542 SP4 1 0.45 0.26 18 9.85 85.96 25 6.18 Yes 65 0.82 Yes 0 0 No -25 0.7 Yes 45 79.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 21521543 + NM_001326542 SP4 1 0.32 0.19 11 -3.39 86.9 27 6.12 Yes 72 1.11 Yes 0 0 No -26 0.77 Yes 44 89.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 21522228 + NM_001326542 SP4 1 0.74 0.33 20 7.03 86.1 33 6.84 Yes 20 0.72 No 0 0 No -32 0.82 Yes 38 91.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 124545142 + NM_017425 SPA17 1 0.97 0.11 8 1.39 0 19 4.24 No 72 0.26 No 0 0 No -21 0.46 No 48 42.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 101180666 + NM_172218 SPAG1 1 0.52 0.31 16 6.2 93.8 27 5.33 No 24 0.65 No 0 0 No -26 0.85 Yes 44 87.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 101199022 + NM_172218 SPAG1 1 0.34 0.25 16 9.56 85.76 25 5.47 No 38 -1.61 No 0 0 No -24 0.89 Yes 46 85.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 101206332 + NM_172218 SPAG1 1 0.27 0.15 10 -5.22 0 37 6.07 Yes 49 0.28 No 20 0.45 Yes -14 0.47 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 101210314 + NM_172218 SPAG1 1 2.89 0.24 12 10.29 89.66 22 5.7 Yes 65 -3.93 No 0 0 No -21 0.93 Yes 49 91.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 101215977 + NM_172218 SPAG1 1 1.85 0.22 13 4.62 85.68 24 4.58 No 6 0.21 No 0 0 No -18 0.54 No 52 74.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 101238085 + NM_172218 SPAG1 1 0.31 0.24 12 3.11 0 35 6.24 Yes 22 0.37 No 0 0 No -39 0.37 No 38 50.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 214161745 + NR_047660 SPAG16 1 0.21 0.1 7 8.82 85.65 17 5.27 No 48 0.26 No 21 0.46 Yes -21 0.5 No 49 59.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 214182726 + NR_047660 SPAG16 1 8.46 0.54 27 10.22 96.96 26 5.83 Yes 72 0.99 Yes 0 0 No -25 0.88 Yes 45 82.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26904770 - NM_006461 SPAG5 1 0.1 0.19 12 9.97 86.92 22 5.29 No 34 1.17 Yes 24 0.6 Yes -46 0.55 No 24 71.2 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 26905107 - NM_006461 SPAG5 1 0.14 0.21 14 -3.67 80.94 25 5.76 Yes 72 0.92 Yes 0 0 No -24 0.96 Yes 46 96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26906850 - NM_006461 SPAG5 1 0.37 0.64 31 -6.11 0 9 3.87 No 70 1.04 Yes 0 0 No -26 0.65 No 44 77.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 26907163 - NM_006461 SPAG5 1 0.08 0.11 8 -3.09 63.24 19 4.69 No -4 0.05 No 18 0.81 Yes -18 0.91 Yes 62 29.2 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 26909838 - NM_006461 SPAG5 1 0.24 0.35 18 6.1 82.35 88 8.18 Yes 75 1.4 Yes 32 0.77 Yes -32 0.86 Yes 15 60.86 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 26913004 - NM_006461 SPAG5 1 0.11 0.19 9 2.75 78.33 23 4.69 No 40 -3.47 No 0 0 No -32 0.42 No 48 84.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 26919493 - NM_006461 SPAG5 1 3.38 5.04 68 2.44 76.37 58 8.21 Yes 45 2.17 Yes 21 0.04 Yes -57 0.84 Yes 13 87.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 26919496 - NM_006461 SPAG5 1 2.1 3.15 65 4.51 74.27 55 8.03 Yes 42 2.17 Yes 21 0.04 Yes -54 0.82 Yes 16 90.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 26919677 - NM_006461 SPAG5 1 0.22 0.38 19 5.79 85.72 18 4.9 No 5 0.11 No 0 0 No -22 0.79 Yes 48 87.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 26920081 - NM_006461 SPAG5 1 2.16 3.29 63 -3.59 0 33 4.64 No 28 0.59 No 0 0 No -28 0.7 Yes 38 67.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 26924078 - NM_006461 SPAG5 1 0.51 0.78 36 6.39 90.92 28 5.29 No 26 0.5 No 0 0 No -27 0.37 No 18 39.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4862968 - NM_004890 SPAG7 1 0.06 0.11 8 0.85 71.56 17 4.8 No 72 -5.15 No 20 0.49 Yes -16 0.58 No 54 63.19 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 4865869 - NM_004890 SPAG7 1 0.07 0.11 7 5.24 85.57 30 5.85 Yes 17 0.55 No 0 0 No -29 0.96 Yes 41 97.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4869615 - NM_004890 SPAG7 1 1.22 1.79 58 7.84 76.87 27 6.1 Yes 14 0.45 No 26 0.9 Yes -26 0.85 Yes 44 85.96 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 49053263 - NM_001130528 SPAG9 1 6.04 4.51 71 8.72 81.22 65 6.81 Yes 46 1.25 Yes 29 0.72 Yes -29 0.7 Yes 41 70.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 49067186 - NM_001130528 SPAG9 1 0.63 0.46 24 2.05 78.12 22 5.59 Yes 45 -3.93 No 0 0 No -27 0.61 No 49 47.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 49067189 - NM_001130528 SPAG9 1 4.36 3.15 69 4.66 72.21 19 5.33 No 42 -3.74 No 24 0.83 Yes -24 0.74 Yes 46 50.66 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 49072589 - NM_001130528 SPAG9 1 0.76 0.67 33 0.99 78.99 25 6 Yes 28 0.34 No 28 0.88 Yes -25 0.75 Yes 45 74.46 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 49074077 - NM_001130528 SPAG9 1 0.08 0.13 8 4.24 70.56 24 5.47 No 71 0.39 No 26 0.85 Yes -23 0.64 No 47 59.93 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 49116115 - NM_001130528 SPAG9 1 0.41 0.11 7 4.66 77.04 28 5.13 No 75 -4.28 No 0 0 No -27 0.47 No 49 62.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 49130253 - NM_001130528 SPAG9 1 0.2 0.18 9 5.85 80.45 20 6.93 Yes 7 1.2 Yes 0 0 No -19 0.8 Yes 51 88.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 49145374 - NM_001130528 SPAG9 1 3.51 3.72 64 13.22 83.33 33 6 Yes 66 1.05 Yes 0 0 No -32 0.7 Yes 38 78.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 151046086 - NM_001309443 SPARC 1 0.14 0.14 10 4.26 78.59 29 6.23 Yes -4 -0.12 No 22 0.69 Yes -22 0.76 Yes 48 82.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 32289508 + NM_014946 SPAST 1 1.55 0.36 20 11.53 91.93 36 4.38 No 23 0.54 No 0 0 No -28 0.51 No 51 56.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 32312563 + NM_014946 SPAST 1 26.92 7.29 71 4.49 86.47 20 7.45 Yes 7 0.43 No 0 0 No -26 0.68 Yes 44 70.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32323866 + NM_014946 SPAST 1 0.4 0.22 14 -6.16 74.4 59 8.65 Yes 46 1.12 Yes 0 0 No -58 0.64 No 12 84.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 32323869 + NM_014946 SPAST 1 0.79 0.5 27 -5.83 0 62 8.77 Yes 49 1.11 Yes 0 0 No -61 0.44 No 12 57.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32362183 + NM_014946 SPAST 1 0.2 0.14 7 -1.62 0 14 3.87 No 34 0.15 No 0 0 No -28 0.82 Yes 42 55.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 32372263 + NM_014946 SPAST 1 0.16 0.11 8 4.44 75.01 58 7.99 Yes 76 -2.19 No 25 0.81 Yes -26 0.85 Yes 44 72.58 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 24864793 + NM_001286792 SPATA13 1 0.48 0.32 15 -3.46 0 30 5.66 Yes 17 1.2 Yes 0 0 No -29 0.84 Yes 41 95.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 24876731 + NM_001286792 SPATA13 1 0.87 0.39 23 -3.39 70.42 32 5.76 Yes 19 1.46 Yes 35 0.69 Yes -31 0.84 Yes 39 90.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 24878615 + NM_001286792 SPATA13 1 2.66 1.13 46 10.02 98.64 22 4.84 No 29 0.55 No 0 0 No -20 0.57 No 50 70.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 48631616 + NM_001258372 SPATA20 1 0.75 0.19 9 1.37 0 48 7.46 Yes 35 2.03 Yes 0 0 No -37 0.68 Yes 19 75.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 138732645 - NM_194296 SPATA24 1 4.63 0.26 17 8.84 80.16 19 5.14 No 38 0.33 No 22 0.55 Yes -22 0.45 No 52 47.18 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 138738485 - NM_194296 SPATA24 1 1.16 0.13 7 3.42 0 14 4.45 No 1 0.88 Yes 0 0 No -35 0.43 No 22 43.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 89726947 + NM_001271909 SPATA33 1 14.53 0.78 39 8.48 82.42 24 3.9 No 62 -4.06 No 23 0.42 Yes -22 0.32 No 48 39.66 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 89735695 + NM_001271909 SPATA33 1 3.99 0.22 15 -3.03 82.71 28 7.35 Yes 15 0.67 No 0 0 No -27 0.77 Yes 43 65.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 123848791 + NM_145207 SPATA5 1 34.15 7.67 72 6.51 79.23 23 6.37 Yes 38 1.14 Yes 0 0 No -29 0.7 Yes 41 72.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123851651 + NM_145207 SPATA5 1 0.31 0.14 8 8.5 92.02 31 6.05 Yes 57 0.5 No 0 0 No -30 0.75 Yes 40 62.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 123851807 + NM_145207 SPATA5 1 0.3 0.13 7 10.75 90.78 21 5.57 Yes 8 0.9 Yes 0 0 No -26 0.49 No 44 55.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 123851915 + NM_145207 SPATA5 1 0.72 0.32 17 6.18 75.04 35 4.76 No 68 1.18 Yes 0 0 No -27 0.85 Yes 43 91.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123870627 + NM_145207 SPATA5 1 1.84 0.46 27 4.79 75.08 24 5.49 No 57 -4.44 No 0 0 No -29 0.7 Yes 41 89.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 123873353 + NM_145207 SPATA5 1 0.67 0.18 11 8.24 78.53 21 7.32 Yes 8 1.68 Yes 0 0 No -20 0.83 Yes 50 80.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 123911928 + NM_145207 SPATA5 1 0.27 0.11 7 6.24 86.87 20 6.34 Yes 60 1.91 Yes 0 0 No -23 0.66 No 47 63.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 123940316 + NM_145207 SPATA5 1 1.7 0.58 28 6.49 87.46 35 5.55 No 17 0.6 No 0 0 No -29 0.67 Yes 41 78.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 124016424 + NM_145207 SPATA5 1 4.3 1.36 47 11.74 95.97 25 4.16 No 5 0.54 No 0 0 No -24 0.64 No 46 81.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 124023338 + NM_145207 SPATA5 1 1.58 0.5 24 13.35 91.5 40 6.78 Yes 27 1.25 Yes 39 0.5 Yes -39 0.91 Yes 31 92.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 124027232 + NM_145207 SPATA5 1 0.33 0.11 8 9.66 86.62 21 6.78 Yes 74 -1.95 No 0 0 No -20 0.75 Yes 50 72.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 124043391 + NM_145207 SPATA5 1 0.28 0.11 7 12.68 89.22 17 5.82 Yes 4 1.25 Yes 0 0 No -28 0.74 Yes 42 81.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 124177859 + NM_145207 SPATA5 1 0.83 0.22 13 5.82 83.52 27 6.09 Yes 14 1.05 Yes 0 0 No -26 0.85 Yes 44 84.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 45706919 + NR_136645 SPATA5L1 1 0.33 0.18 12 10.49 88.71 19 5.65 Yes 6 0.87 Yes 0 0 No -26 0.71 Yes 44 61.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 45709508 + NR_136645 SPATA5L1 1 3.14 1.22 46 3.23 78.48 25 5.09 No 61 1.2 Yes 0 0 No -24 0.89 Yes 46 92.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 45710759 + NR_136645 SPATA5L1 1 0.36 0.22 13 3.7 0 32 5.93 Yes 54 0.42 No 0 0 No -32 0.46 No 43 34.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 49856014 + NM_023071 SPATS2 1 0.11 0.14 9 9.69 88.94 31 5.74 Yes 62 0.33 No 26 0.95 Yes -30 0.55 No 40 51.66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 49856057 + NM_023071 SPATS2 1 2.63 3.49 67 8.87 87.88 31 4.22 No 14 1.16 Yes 26 0.95 Yes -26 0.84 Yes 44 92.39 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 49877518 + NM_023071 SPATS2 1 0.32 0.46 21 2.26 73.84 45 9.25 Yes 32 1.22 Yes 0 0 No -45 0.7 Yes 25 82.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49878401 + NM_023071 SPATS2 1 0.2 0.29 19 7.06 92.68 26 5.18 No 43 0.48 No 0 0 No -25 0.94 Yes 45 91.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49880032 + NM_023071 SPATS2 1 0.73 1.04 46 4.41 86.68 27 5.1 No 2 0.6 No 26 0.8 Yes -26 0.63 No 44 75.13 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 49884060 + NM_023071 SPATS2 1 0.09 0.15 9 6.56 80.75 21 4.69 No 42 0.69 No 0 0 No -55 0.55 No 50 41.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 49885588 + NM_023071 SPATS2 1 0.69 0.76 37 4.81 73.46 45 6.63 Yes 32 1.56 Yes 0 0 No -44 0.6 No 26 85.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 49890307 + NM_023071 SPATS2 1 0.2 0.22 12 5.65 82.61 25 6.31 Yes 12 1.92 Yes 0 0 No -24 0.63 No 46 83.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 49890307 + NM_023071 SPATS2 1 0.2 0.24 15 5.65 82.61 25 6.31 Yes 12 1.92 Yes 0 0 No -24 0.63 No 46 83.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 49890697 + NM_023071 SPATS2 1 0.11 0.13 7 3.12 77.69 36 7.04 Yes 23 0.55 No 0 0 No -35 0.68 Yes 35 76.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49892596 + NM_023071 SPATS2 1 0.18 0.28 19 4.74 84.41 39 9.89 Yes 47 1.28 Yes 0 0 No -24 0.49 No 46 67.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49896778 + NM_023071 SPATS2 1 0.18 0.21 13 10.12 81.35 30 4.68 No 17 1.53 Yes 0 0 No -29 0.55 No 45 62.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49897535 + NM_023071 SPATS2 1 0.12 0.14 9 1.69 67.44 26 4.15 No 30 0.47 No 0 0 No -18 0.36 No 52 72.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 49906644 + NM_023071 SPATS2 1 9.2 11.79 71 12.58 90.76 27 5.74 Yes 14 0.68 No 26 0.87 Yes -26 0.95 Yes 44 96.02 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 49916962 + NM_023071 SPATS2 1 0.11 0.13 9 7.56 88.75 23 5.69 Yes 10 2.04 Yes 0 0 No -23 0.57 No 44 55.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 49919860 + NM_023071 SPATS2 1 5.19 6.24 72 7.35 89.06 13 5.74 Yes 53 -2.38 No 26 0.58 Yes -26 0.55 No 44 70.47 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 201236831 + NM_015535 SPATS2L 1 2.33 1.9 61 4.79 81.98 26 6.55 Yes 13 0.53 No 25 0.81 Yes -25 0.83 Yes 45 88.59 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 201242863 + NM_015535 SPATS2L 1 0.16 0.11 8 6.81 92.61 25 4.82 No 12 0.61 No 24 0.9 Yes -24 0.87 Yes 46 86.65 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 201248589 + NM_015535 SPATS2L 1 1.33 1.08 42 5.24 84.01 55 5.51 No 60 0.95 Yes 29 0.78 Yes -29 0.9 Yes 28 68.48 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 201281105 + NM_015535 SPATS2L 1 0.07 0.1 7 2.71 0 27 5.66 Yes 30 0.29 No 0 0 No -26 0.83 Yes 44 66.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 201303847 + NM_015535 SPATS2L 1 0.25 0.19 13 0.54 84.41 32 3.89 No 52 0.36 No 0 0 No -31 0.89 Yes 39 96.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 201325560 + NM_015535 SPATS2L 1 0.35 0.57 24 10.49 94.25 38 6.4 Yes 25 1.54 Yes 37 0.68 Yes -37 0.7 Yes 33 86.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 201332009 + NM_015535 SPATS2L 1 0.17 0.29 16 -2.07 0 24 7.7 Yes 11 1.5 Yes 26 0.82 Yes -23 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 11264432 - NM_001317032 SPC24 1 0.21 0.19 11 11.34 98.73 31 6.09 Yes 44 -1.03 No 0 0 No -28 0.76 Yes 42 75.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 169741418 - NM_020675 SPC25 1 0.09 0.13 7 6.57 83.26 33 5.3 No 17 0.78 Yes 32 0.61 Yes -33 0.4 No 38 44.57 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 169745819 - NM_020675 SPC25 1 0.11 0.11 8 -3.67 0 20 4.58 No 46 0.75 No 24 0.82 Yes -58 0.49 No 12 36.97 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 52740812 + NM_014041 SPCS1 1 0.01 0.11 8 2.9 0 26 6.36 Yes 59 0.8 Yes 0 0 No -25 0.78 Yes 45 73.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52740801 + NM_014041 SPCS1 1 0.03 0.21 13 -4.83 0 15 5.25 No 48 0.81 Yes 21 0.7 Yes -24 0.75 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 52740812 + NM_014041 SPCS1 1 3.16 24.86 72 2.9 0 26 6.36 Yes 59 0.8 Yes 0 0 No -25 0.78 Yes 45 73.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 74660547 + NM_014752 SPCS2 1 0.03 0.1 7 -4.26 74.69 44 7.38 Yes 8 0.18 No 23 0.92 Yes -20 0.36 No 27 59.08 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 74663546 + NM_014752 SPCS2 1 0.08 0.29 16 4.86 85.51 29 5.83 Yes 59 0.82 Yes 0 0 No -28 0.57 No 42 68.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 74674639 + NM_014752 SPCS2 1 0.27 1.01 39 8.04 94.53 64 7.43 Yes 69 1.1 Yes 24 0.6 Yes -24 0.79 Yes 46 60.78 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 74680655 + NM_014752 SPCS2 1 0.03 0.17 11 2.44 69 93 8.19 Yes 9 1.98 Yes 21 0.9 Yes -21 0.83 Yes 49 70.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 74680684 + NM_014752 SPCS2 1 0.09 0.44 25 10.23 83.33 15 5.47 No 38 1.97 Yes 23 0.24 Yes -28 0.37 No 50 28.18 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 74676652 + NM_014752 SPCS2 1 0.02 0.17 9 8.43 84.6 29 6.39 Yes 16 0.86 Yes 0 0 No -28 0.88 Yes 42 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 74676898 + NM_014752 SPCS2 1 0.06 0.43 24 8.23 80.55 35 8.36 Yes 22 0.95 Yes 0 0 No -34 0.74 Yes 36 90.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 74677829 + NM_014752 SPCS2 1 0.03 0.17 11 1.46 83.28 29 8.29 Yes 16 0.98 Yes 0 0 No -28 0.5 No 42 59.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 74677833 + NM_014752 SPCS2 1 1.05 4.88 71 4.37 0 33 8.53 Yes 20 0.96 Yes 0 0 No -32 0.49 No 38 61.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 74679054 + NM_014752 SPCS2 1 0.03 0.17 10 -0.13 70.73 28 6.12 Yes -3 0.29 No 0 0 No -27 0.39 No 36 54.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 74680655 + NM_014752 SPCS2 1 2.28 10.67 72 2.44 69 93 8.19 Yes 9 1.98 Yes 21 0.9 Yes -21 0.83 Yes 49 70.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 74680684 + NM_014752 SPCS2 1 2.2 10.25 72 10.23 83.33 15 5.47 No 38 1.97 Yes 23 0.24 Yes -28 0.37 No 50 28.18 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 74680613 + NM_014752 SPCS2 1 0.11 0.53 31 -4.57 0 51 8.08 Yes 5 1.2 Yes 21 0.9 Yes -17 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 74687895 + NM_014752 SPCS2 1 0.02 0.21 12 1.75 0 88 9.74 Yes 75 0.94 Yes 27 0.72 Yes -21 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 177243321 + NM_021928 SPCS3 1 0.05 0.24 11 -10.73 0 24 6.24 Yes 11 0.91 Yes 0 0 No -23 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 177243322 + NM_021928 SPCS3 1 0.02 0.11 8 -11.72 0 25 6.32 Yes 12 0.9 Yes 0 0 No -24 0.51 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 177243331 + NM_021928 SPCS3 1 0.02 0.11 7 -4.86 0 20 4.47 No 21 0.87 Yes 0 0 No -33 0.56 No 37 46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169017756 + NM_001329640 SPDL1 1 0.93 1.28 45 2.38 85.17 20 5.29 No 7 0.8 Yes 30 0.71 Yes -30 0.52 No 40 84.43 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 169017759 + NM_001329640 SPDL1 1 1.09 1.32 49 6.67 88.14 23 5.51 No 10 0.78 Yes 30 0.71 Yes -33 0.41 No 37 80.52 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 169020361 + NM_001329640 SPDL1 1 0.1 0.13 7 1.06 0 41 7.1 Yes 14 1.09 Yes 0 0 No -29 0.44 No 41 69.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 169022613 + NM_001329640 SPDL1 1 0.47 0.49 25 7.87 85.64 29 4.9 No 46 1.04 Yes 25 0.69 Yes -22 0.46 No 48 60.57 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 169023588 + NM_001329640 SPDL1 1 2.22 2.33 64 5.01 79.17 23 5.74 Yes 50 0.98 Yes 22 0.82 Yes -26 0.31 No 48 51.09 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 169024981 + NM_001329640 SPDL1 1 0.32 0.28 12 7.85 80.07 29 3.96 No 40 0.79 Yes 0 0 No -28 0.86 Yes 42 74.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 169028285 + NM_001329640 SPDL1 1 0.52 0.49 28 -4.1 81.44 39 6.7 Yes 45 1.1 Yes 0 0 No -38 0.91 Yes 32 95.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 20140172 + NM_001243439 SPECC1 1 214.27 27.92 72 8.8 89.1 33 6.08 Yes 28 1.4 Yes 32 0.74 Yes -30 0.6 No 40 85.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 24707961 + NM_001254732 SPECC1L 1 3.5 3.44 68 -2.32 62.23 44 4.9 No 40 0.61 No 0 0 No -56 0.77 Yes 27 82.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 24707981 + NM_001254732 SPECC1L 1 0.43 0.35 18 3.99 77.41 15 5.39 No 2 1.52 Yes 0 0 No -24 0.5 No 56 24.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 24708071 + NM_001254732 SPECC1L 1 0.15 0.14 10 6.27 70.71 24 4.94 No 11 1.37 Yes 0 0 No -23 0.87 Yes 47 80.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24726210 + NM_001254732 SPECC1L 1 0.28 0.18 13 -6.17 0 30 6.36 Yes 17 0.63 No 0 0 No -29 0.39 No 30 22.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 24739449 + NM_001254732 SPECC1L 1 0.44 0.49 28 4.39 83 46 7.26 Yes 57 -2.5 No 43 0.11 Yes -43 0.55 No 27 68.26 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 24743055 + NM_001254732 SPECC1L 1 0.09 0.11 7 -2.84 74.21 33 6.5 Yes 14 0.82 Yes 0 0 No -32 0.84 Yes 38 82.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24750462 + NM_001254732 SPECC1L 1 0.09 0.1 7 8.18 93.33 34 7.91 Yes 75 1.05 Yes 0 0 No -26 0.37 No 44 78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 24754629 + NM_001254732 SPECC1L 1 1.12 1.08 47 8.93 88.84 30 8.37 Yes 17 1.5 Yes 0 0 No -29 0.8 Yes 41 90.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 24761490 + NM_001254732 SPECC1L 1 0.13 0.1 7 3.71 86.47 22 4.08 No 49 0.92 Yes 0 0 No -21 0.57 No 49 43.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 16194373 + NM_015001 SPEN 1 0.55 0.44 23 6.08 83.11 88 9.46 Yes 65 1.1 Yes 0 0 No -42 0.76 Yes 28 79.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16231403 + NM_015001 SPEN 1 0.12 0.1 7 3.68 84.41 36 7.69 Yes 27 1.3 Yes 0 0 No -35 0.81 Yes 35 69.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 16235818 + NM_015001 SPEN 1 2.84 2.44 65 3.81 85.97 31 5.92 Yes 50 1.99 Yes 31 0.79 Yes -30 0.55 No 40 77.13 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 16249138 + NM_015001 SPEN 1 0.06 0.1 7 0.34 83.95 25 5.59 Yes 12 0.71 No 0 0 No -24 0.8 Yes 46 82.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 16265196 + NM_015001 SPEN 1 0.18 0.1 7 4.85 77.67 27 5.2 No -4 0.86 Yes 24 0.97 Yes -26 0.92 Yes 44 87.98 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 16265320 + NM_015001 SPEN 1 0.8 0.44 25 9.05 90.85 28 5.74 Yes 15 0.72 No 0 0 No -27 0.95 Yes 43 91.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 16265959 + NM_015001 SPEN 1 0.16 0.15 11 4.52 82.64 12 3.8 No 18 0.99 Yes 0 0 No -20 0.81 Yes 50 79.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44856860 - NM_001160227 SPG11 1 0.18 0.13 8 7.6 86.79 22 5.29 No 55 1.77 Yes 0 0 No -21 0.77 Yes 49 84.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44858330 - NM_001160227 SPG11 1 1.66 0.64 24 10.43 88.45 35 6.61 Yes 70 1.09 Yes 0 0 No -38 0.66 No 41 68.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 44862851 - NM_001160227 SPG11 1 0.9 0.69 36 1.09 0 9 3.87 No 24 0.67 No 0 0 No -26 0.91 Yes 44 86.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44862872 - NM_001160227 SPG11 1 0.52 0.42 22 6.75 87.47 16 4.63 No 3 0.68 No 20 0.95 Yes -18 0.72 Yes 52 80.45 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 44862920 - NM_001160227 SPG11 1 0.18 0.13 8 11.15 89.88 27 5.46 No 48 0.16 No 0 0 No -26 0.78 Yes 44 90.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44876613 - NM_001160227 SPG11 1 2.38 1.89 61 8.68 93.21 30 5.66 Yes 39 -2.89 No 0 0 No -25 0.82 Yes 45 87.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44880837 - NM_001160227 SPG11 1 0.48 0.29 20 6.12 71.96 27 6.84 Yes 53 0.11 No 26 0.76 Yes -43 0.64 No 33 76.72 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 44882886 - NM_001160227 SPG11 1 0.2 0.17 10 1.94 70.33 17 5.77 Yes 71 0.56 No 0 0 No -26 0.58 No 41 63.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 44887607 - NM_001160227 SPG11 1 0.3 0.17 10 -5.61 79.91 16 6.67 Yes 51 -1.53 No 0 0 No -45 0.59 No 31 72.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 44887684 - NM_001160227 SPG11 1 0.58 0.29 19 -7.46 0 13 3.87 No 53 1.11 Yes 28 0.61 Yes -41 0.44 No 58 47.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 44890946 - NM_001160227 SPG11 1 0.18 0.14 9 8.81 84.34 30 5.37 No 46 -0.83 No 0 0 No -29 0.74 Yes 41 66.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 44894023 - NM_001160227 SPG11 1 0.73 0.63 32 1.77 74.68 23 6.06 Yes 10 1.61 Yes 0 0 No -22 0.96 Yes 48 93.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44894169 - NM_001160227 SPG11 1 0.39 0.33 20 7.89 83.54 36 5.33 No 20 0.33 No 0 0 No -31 0.4 No 39 64.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 44896396 - NM_001160227 SPG11 1 2.07 1.67 54 10.75 92.63 22 5.19 No 9 0.24 No 21 0.74 Yes -21 0.91 Yes 49 90.94 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 44897126 - NM_001160227 SPG11 1 2.67 2.19 60 2.32 84.41 38 8.34 Yes 25 1.56 Yes 0 0 No -37 0.73 Yes 33 79.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44905758 - NM_001160227 SPG11 1 0.23 0.21 12 0.23 63.04 32 5.77 Yes 45 1.37 Yes 30 0.3 Yes -31 0.59 No 38 43.75 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 44913475 - NM_001160227 SPG11 1 0.18 0.18 11 3.27 81.86 26 5.1 No 72 1.68 Yes 0 0 No -25 0.5 No 12 53.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 44913971 - NM_001160227 SPG11 1 1.28 0.69 39 7.96 90.15 27 5.29 No 14 1.34 Yes 0 0 No -26 0.94 Yes 44 96.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44918702 - NM_001160227 SPG11 1 0.25 0.25 15 -0.33 0 31 4.93 No 74 -4.05 No 0 0 No -31 0.81 Yes 39 89.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44923735 - NM_001160227 SPG11 1 0.14 0.13 9 9.18 88.07 36 7.61 Yes 23 1.52 Yes 0 0 No -35 0.86 Yes 35 87.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44934892 - NM_001160227 SPG11 1 0.69 0.68 34 8.58 88.27 29 6.3 Yes 16 0.48 No 0 0 No -28 0.73 Yes 42 77.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 44949462 - NM_001160227 SPG11 1 6.88 2.96 69 1.24 66.34 42 5.84 Yes 29 1.1 Yes 0 0 No -37 0.54 No 33 71.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 44949477 - NM_001160227 SPG11 1 0.35 0.14 10 -2.73 0 27 4.68 No 14 1.09 Yes 0 0 No -22 0.65 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 44955128 - NM_001160227 SPG11 1 0.46 0.19 12 7.45 80 25 5.29 No 37 1.59 Yes 0 0 No -24 0.7 Yes 46 67.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 36902128 - NM_015087 SPG20 1 0.91 0.21 12 11.83 83.49 29 6.63 Yes -2 0.82 Yes 0 0 No -28 0.66 No 42 70.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 65261404 - NM_001127889 SPG21 1 1.81 4.9 71 7.64 96.46 23 6.96 Yes 25 0.84 Yes 0 0 No -22 0.73 Yes 48 74.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 65267114 - NM_001127889 SPG21 1 0.08 0.22 12 -1.88 0 14 4.12 No 59 0.74 No 30 0.65 Yes -13 0.43 No 21 44.69 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 65272579 - NM_001127889 SPG21 1 0.18 0.46 9 10.5 89.62 12 5.2 No 38 2.2 Yes 0 0 No -21 0.61 No 49 57.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 65275597 - NM_001127889 SPG21 1 0.12 0.21 12 1.77 83.14 47 6.02 Yes 34 1.76 Yes 0 0 No -37 0.51 No 33 62.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 89579383 + NM_003119 SPG7 1 0.3 0.15 10 4.59 78 33 6.08 Yes 39 0.87 Yes 0 0 No -32 0.95 Yes 38 97.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89580753 + NM_003119 SPG7 1 5.05 2.18 59 8.6 94.37 40 7.58 Yes 27 1.87 Yes 39 0.65 Yes -39 0.83 Yes 31 87.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89584047 + NM_003119 SPG7 1 0.27 0.11 8 4.74 84.41 36 6.75 Yes 23 1.44 Yes 0 0 No -35 0.83 Yes 35 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89588137 + NM_003119 SPG7 1 1.25 0.54 31 9.64 88.05 28 5.28 No 15 0.29 No 0 0 No -27 0.96 Yes 43 97.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89589890 + NM_003119 SPG7 1 0.45 0.21 13 5.46 74.8 56 6.01 Yes 14 1.12 Yes 0 0 No -29 0.32 No 41 43.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 89590170 + NM_003119 SPG7 1 1.81 0.75 33 6.29 86.27 20 4.87 No 71 -3.41 No 0 0 No -23 0.57 No 51 73.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 89593165 + NM_003119 SPG7 1 0.6 0.47 27 -0.45 0 22 4.36 No 2 0.06 No 0 0 No -21 0.52 No 49 38.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89595542 + NM_003119 SPG7 1 1.87 1.56 50 7.1 88.72 22 5.29 No 9 0.82 Yes 0 0 No -21 0.89 Yes 49 87.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89595636 + NM_003119 SPG7 1 0.22 0.18 9 2.88 75.59 37 4.99 No 54 1.3 Yes 0 0 No -20 0.53 No 50 50.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 89598332 + NM_003119 SPG7 1 0.35 0.26 15 1.56 78.85 17 4.5 No 74 -2.03 No 0 0 No -48 0.45 No 22 39.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89603172 + NM_003119 SPG7 1 0.36 0.14 8 10.93 91.32 27 5.74 Yes 14 0.2 No 26 0.69 Yes -26 0.82 Yes 44 77.66 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 89603172 + NM_003119 SPG7 1 51.2 18.54 72 10.93 91.32 27 5.74 Yes 14 0.2 No 26 0.69 Yes -26 0.82 Yes 44 77.66 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 89607351 + NM_003119 SPG7 1 19.06 7.19 70 5.8 83.76 24 5.34 No 72 1.01 Yes 0 0 No -23 0.67 Yes 47 72.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89612279 + NM_003119 SPG7 1 1.07 0.61 32 9.44 82.98 42 7.76 Yes 56 1.3 Yes 20 0.33 Yes -42 0.75 Yes 28 80.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89615102 + NM_003119 SPG7 1 0.31 0.21 10 5.54 71.85 34 7.82 Yes 11 1.99 Yes 0 0 No -23 0.83 Yes 47 82.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89615387 + NM_003119 SPG7 1 0.17 0.13 8 6.3 87.24 30 5.38 No 33 1.65 Yes 22 0.79 Yes -22 0.73 Yes 51 59.12 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 89617504 + NM_003119 SPG7 1 0.46 0.31 17 4.08 79.58 55 7.58 Yes 66 -2.78 No 0 0 No -30 0.3 No 46 27.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89617555 + NM_003119 SPG7 1 0.48 0.35 15 3.92 75.86 43 7.46 Yes -3 0.43 No 0 0 No -20 0.78 Yes 50 75.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89622285 + NM_003119 SPG7 1 0.86 0.47 24 8.23 80.11 24 5.48 No 11 0.48 No 0 0 No -23 0.93 Yes 47 95.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89622328 + NM_003119 SPG7 1 0.19 0.11 7 4.45 71.19 29 6.39 Yes 54 0.44 No 0 0 No -28 0.92 Yes 42 92.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 49131695 + NM_001204160 SPHK2 1 2.34 0.83 41 7.52 82.19 41 6.4 Yes 28 1.9 Yes 0 0 No -40 0.36 No 45 64.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 47377046 - NM_003120 SPI1 1 0.29 0.19 12 6.77 75.89 26 5.66 Yes NA NA NA 0 0 No -28 0.6 No 45 67.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 47377094 - NM_003120 SPI1 1 0.51 0.28 15 0.59 0 26 7.53 Yes NA NA NA 0 0 No -25 0.68 Yes 45 82.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 47397284 - NM_003120 SPI1 1 41.82 27.97 72 4.66 81.62 17 5.57 Yes 4 2.19 Yes 24 0.72 Yes -16 0.76 Yes 54 80.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 50923149 + NM_003121 SPIB 1 0.09 0.1 7 -2.47 66.62 20 4.73 No 30 0.53 No 22 0.79 Yes -42 0.62 No 28 50.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 50926206 + NM_003121 SPIB 1 1.33 2.1 58 5.7 78.12 17 3.67 No 64 0.11 No 0 0 No -31 0.68 Yes 51 40.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 50926896 + NM_003121 SPIB 1 10.25 10.76 71 3.38 72.59 42 6.59 Yes 34 1.68 Yes 18 0.2 Yes -26 0.42 No 33 36.87 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 113212969 - NM_001331079 SPICE1 1 0.95 0.33 18 6.62 72.16 24 5.47 No 21 0.77 Yes 0 0 No -33 0.63 No 37 68.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 113222096 - NM_001331079 SPICE1 1 1.75 0.56 25 7.87 85.05 26 4.27 No 30 0.19 No 25 0.69 Yes -28 0.58 No 44 67.7 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 113222777 - NM_001331079 SPICE1 1 0.36 0.13 8 12.17 88.27 36 6.16 Yes 23 1.14 Yes 0 0 No -32 0.64 No 38 76.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 48200640 + NM_001282919 SPIDR 1 0.17 0.14 7 -3.74 0 39 5.99 Yes 72 -5.38 No 0 0 No -22 0.65 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 48200661 + NM_001282919 SPIDR 1 0.33 0.29 18 4.83 72.24 28 6.06 Yes 15 0.13 No 0 0 No -30 0.73 Yes 40 83.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 48243292 + NM_001282919 SPIDR 1 0.54 0.21 14 7.72 92.69 17 5.3 No 4 1.17 Yes 0 0 No -27 0.61 No 43 66.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48243368 + NM_001282919 SPIDR 1 0.55 0.22 13 7.76 79.09 24 4.7 No 34 0.96 Yes 27 0.43 Yes -26 0.34 No 43 43.33 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 48307537 + NM_001282919 SPIDR 1 3.69 1.46 52 10.4 91.83 19 5.7 Yes 39 1.06 Yes 0 0 No -26 0.67 Yes 44 70.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48239484 + NM_001282919 SPIDR 1 0.35 0.15 9 2.32 64.69 39 7.78 Yes 26 2.03 Yes 0 0 No -38 0.77 Yes 32 89.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48243292 + NM_001282919 SPIDR 1 0.34 0.14 10 7.72 92.69 17 5.3 No 4 1.17 Yes 0 0 No -27 0.61 No 43 66.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48265860 + NM_001282919 SPIDR 1 0.37 0.14 9 0.74 58.68 39 7.67 Yes 26 1.42 Yes 0 0 No -38 0.7 Yes 32 91.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48300904 + NM_001282919 SPIDR 1 1.1 0.46 24 -2.48 80.8 36 8.1 Yes 69 0.83 Yes 24 0.6 Yes -24 0.88 Yes 46 83.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 48307537 + NM_001282919 SPIDR 1 7.2 2.85 65 10.4 91.83 19 5.7 Yes 39 1.06 Yes 0 0 No -26 0.67 Yes 44 70.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48331664 + NM_001282919 SPIDR 1 0.39 0.19 12 7.38 88.97 32 7.24 Yes 19 1.08 Yes 31 0.67 Yes -31 0.89 Yes 39 85.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 48337064 + NM_001282919 SPIDR 1 0.84 0.4 24 12.05 95.16 29 6.5 Yes 69 -2.84 No 0 0 No -29 0.55 No 42 61.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 48358022 + NM_001282919 SPIDR 1 0.58 0.26 14 11.3 89.4 36 8.78 Yes 35 2.02 Yes 0 0 No -35 0.87 Yes 35 87.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48395896 + NM_001282919 SPIDR 1 12.52 5.06 70 9.36 95.68 27 6.07 Yes 62 0.74 No 0 0 No -26 0.87 Yes 44 93.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 48423392 + NM_001282919 SPIDR 1 0.73 0.25 17 5.75 82.63 23 6.02 Yes 54 0.32 No 0 0 No -36 0.6 No 34 58.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 48522621 + NM_001282919 SPIDR 1 1.24 0.24 13 4.76 80.89 24 6.54 Yes 36 1.47 Yes 0 0 No -24 0.58 No 47 66.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48607577 + NM_001282919 SPIDR 1 0.88 0.53 27 11.35 93.2 22 5.41 No 66 0.89 Yes 0 0 No -21 0.87 Yes 49 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48616890 + NM_001282919 SPIDR 1 0.57 0.15 9 3.09 87.43 24 6.97 Yes 11 0.79 Yes 0 0 No -23 0.95 Yes 47 93.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 48626091 + NM_001282919 SPIDR 1 0.55 0.11 8 6.79 88.31 24 7.07 Yes 11 1.33 Yes 0 0 No -22 0.81 Yes 47 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 91030521 + NM_006717 SPIN1 1 10.79 2.24 62 8.25 85.32 26 7.55 Yes 13 1.42 Yes 25 0.88 Yes -25 0.91 Yes 45 95.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 91031558 + NM_006717 SPIN1 1 1.38 0.28 14 8.08 83.68 45 6.41 Yes 32 1.41 Yes 35 0.55 Yes -35 0.41 No 35 57.36 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 91033692 + NM_006717 SPIN1 1 2.25 0.43 23 8.95 84.27 30 5.77 Yes 36 0.81 Yes 25 0.52 Yes -29 0.66 No 41 58.38 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 91033764 + NM_006717 SPIN1 1 2.76 0.56 29 7.07 82.46 30 5.66 Yes 17 1.84 Yes 29 0.93 Yes -29 0.8 Yes 41 91.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 57147068 - NM_001282461 SPIN2B 1 7.65 0.36 19 9.84 82.99 20 7.75 Yes NA NA NA 36 0.31 Yes -38 0.64 No 32 73.03 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 29674880 + NM_003123 SPN 1 0.03 0.14 8 4.27 79.04 33 5.37 No 34 0.76 No 0 0 No -29 0.81 Yes 38 74.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 29674965 + NM_003123 SPN 1 0.13 0.61 33 -7.85 0 13 3.63 No 71 -4.93 No 0 0 No -58 0.24 No 21 39.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28990266 + NM_032038 SPNS1 1 2.85 1.38 45 11.78 89.24 29 5.48 No 16 0.15 No 0 0 No -28 0.53 No 42 65.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28990580 + NM_032038 SPNS1 1 0.51 0.25 16 4.82 72.79 28 6.82 Yes 15 1.04 Yes 0 0 No -27 0.95 Yes 43 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28992775 + NM_032038 SPNS1 1 0.92 0.51 28 5 73.4 31 6.08 Yes 18 0.54 No 30 0.86 Yes -30 0.9 Yes 40 91.52 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 47679083 - NM_001007226 SPOP 1 0.17 0.28 17 9.95 89.65 29 4.96 No 30 0.58 No 0 0 No -21 0.56 No 47 49.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 47695926 - NM_001007226 SPOP 1 0.25 0.32 17 8.72 69.93 24 5.8 Yes 11 1.36 Yes 23 0.95 Yes -23 0.95 Yes 47 97.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 47696469 - NM_001007226 SPOP 1 0.06 0.13 8 -5.93 68.69 37 7.22 Yes 24 1.13 Yes 0 0 No -30 0.32 No 34 52.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 47698033 - NM_001007226 SPOP 1 0.08 0.15 9 8.45 85.04 28 5.98 Yes 15 1.03 Yes 27 0.81 Yes -27 0.53 No 43 34.43 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 47699646 - NM_001007226 SPOP 1 0.34 0.33 20 8.54 84.9 14 8.09 Yes 1 1.39 Yes 24 0.48 Yes -24 0.7 Yes 46 84.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 47714172 - NM_001007226 SPOP 1 31.81 5.6 72 8.53 88.46 25 5.89 Yes 12 1.45 Yes 24 0.84 Yes -24 0.81 Yes 46 68.29 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 47714172 - NM_001007226 SPOP 1 7.13 1.28 48 8.53 88.46 25 5.89 Yes 12 1.45 Yes 24 0.84 Yes -24 0.81 Yes 46 68.29 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 47714172 - NM_001007226 SPOP 1 65.76 11.6 72 8.53 88.46 25 5.89 Yes 12 1.45 Yes 24 0.84 Yes -24 0.81 Yes 46 68.29 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 47753355 - NM_001007226 SPOP 1 0.77 0.1 7 4.71 84.17 27 5.19 No 43 0.43 No 0 0 No -55 0.84 Yes 15 89.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 139308543 + NM_001001664 SPOPL 1 0.29 0.22 10 6.53 78.67 31 5.67 Yes 2 0.18 No 30 0.62 Yes -24 0.44 No 46 49.69 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 139308543 + NM_001001664 SPOPL 1 21.06 12.33 72 6.53 78.67 31 5.67 Yes 2 0.18 No 30 0.62 Yes -24 0.44 No 46 49.69 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 139308547 + NM_001001664 SPOPL 1 0.36 0.19 9 0.38 0 35 5.97 Yes 6 0.17 No 0 0 No -28 0.44 No 42 47.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 139310127 + NM_001001664 SPOPL 1 0.29 0.24 13 -3.55 0 57 5.58 Yes 62 0.89 Yes 0 0 No -37 0.56 No 33 73.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 139312008 + NM_001001664 SPOPL 1 12.06 7.32 72 9.22 88.77 62 8.95 Yes 49 1.91 Yes 22 0.93 Yes -22 0.97 Yes 48 95.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 131585109 - NM_016390 SPOUT1 1 0.13 0.11 7 -1.17 0 26 5.96 Yes 62 -0.42 No 0 0 No -25 0.74 Yes 45 75.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131586050 - NM_016390 SPOUT1 1 0.24 0.14 7 5.2 83.89 48 6.71 Yes 35 0.97 Yes 0 0 No -29 0.81 Yes 41 83.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131586143 - NM_016390 SPOUT1 1 7.06 4.11 70 3.8 77.02 34 6.32 Yes 40 1.46 Yes 0 0 No -29 0.48 No 41 48.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 131587167 - NM_016390 SPOUT1 1 2.07 2.13 59 8.29 84.47 16 6.41 Yes 3 1.95 Yes 22 0.92 Yes -25 0.63 No 33 81.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 131591157 - NM_016390 SPOUT1 1 0.3 0.21 11 7.74 72.99 29 5.75 Yes 24 1.17 Yes 28 0.62 Yes -28 0.72 Yes 34 47.1 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 51041940 - NM_032802 SPPL2A 1 0.38 0.4 23 1.45 0 27 4.46 No 14 0.09 No 0 0 No -26 0.72 Yes 44 56.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 51056789 - NM_032802 SPPL2A 1 0.21 0.21 13 6.19 89.01 21 6.32 Yes 41 1.12 Yes 32 0.07 Yes -20 0.93 Yes 50 96.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 2337113 + NM_152988 SPPL2B 1 0.67 0.31 16 11.34 82.34 52 7.48 Yes 39 0.48 No 24 0.61 Yes -28 0.66 No 42 79.28 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 2338812 + NM_152988 SPPL2B 1 1.22 0.24 14 3.34 72.31 32 5.66 Yes 31 -1.04 No 31 0.48 Yes -28 0.49 No 39 47.91 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 2339063 + NM_152988 SPPL2B 1 5.55 2.03 57 -0.69 79.64 28 8.37 Yes 15 2.21 Yes 27 0.93 Yes -27 0.94 Yes 43 92.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 2339825 + NM_152988 SPPL2B 1 10.01 3.58 68 2.35 74.63 24 4.44 No NA NA NA 23 0.68 Yes -26 0.48 No 44 35.66 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 2340929 + NM_152988 SPPL2B 1 2.85 1.39 51 2.52 71.28 27 4.45 No 41 2.05 Yes 24 0.82 Yes -24 0.47 No 49 40.8 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 2344441 + NM_152988 SPPL2B 1 1.22 0.67 33 7.03 93.87 25 5.29 No 23 0.02 No 0 0 No -24 0.71 Yes 48 58.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 121204196 - NM_139015 SPPL3 1 0.08 0.11 8 12.42 84.87 28 6.24 Yes 15 0.91 Yes 24 0.97 Yes -27 0.89 Yes 43 93.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 121209501 - NM_139015 SPPL3 1 0.17 0.33 16 6.49 83.99 20 5.99 Yes 24 0.63 No 0 0 No -36 0.67 Yes 51 84.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 121220588 - NM_139015 SPPL3 1 0.23 0.32 17 4.55 62.06 28 4.95 No 15 0.24 No 23 0.73 Yes -27 0.79 Yes 43 66.52 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 121306058 - NM_139015 SPPL3 1 0.44 0.19 12 10.59 92.68 25 7.07 Yes 12 2.16 Yes 0 0 No -24 0.85 Yes 46 93.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121338390 - NM_139015 SPPL3 1 0.18 0.11 8 3.73 0 35 7.87 Yes 22 1.3 Yes 0 0 No -34 0.83 Yes 36 81.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 121339752 - NM_139015 SPPL3 1 0.73 0.38 22 4.65 79.29 35 6.9 Yes 22 1.52 Yes 34 0.81 Yes -34 0.88 Yes 36 92.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 73115466 + NM_003124 SPR 1 0.6 0.11 8 3.76 68.24 27 5.74 Yes 28 0.46 No 0 0 No -26 0.9 Yes 44 81.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 73115548 + NM_003124 SPR 1 1.36 0.29 14 6.42 80.46 33 5.75 Yes 20 1.57 Yes 26 0.9 Yes -26 0.74 Yes 44 64.49 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 65561400 - NM_181784 SPRED2 1 0.86 0.22 14 5.4 81.52 60 6.11 Yes 47 1.29 Yes 32 0.62 Yes -39 0.55 No 31 73.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 65609282 - NM_181784 SPRED2 1 1.07 0.15 9 11.65 94.77 21 4.98 No 52 0.24 No 0 0 No -38 0.53 No 32 64.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 53460182 - NM_032840 SPRYD3 1 0.24 0.17 12 4.71 80.88 61 6.26 Yes 48 1.01 Yes 25 0.52 Yes -30 0.38 No 40 18.53 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 53460244 - NM_032840 SPRYD3 1 0.13 0.1 7 -2.08 0 16 3.27 No 34 0.29 No 0 0 No -15 0.53 No 55 49.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 53460264 - NM_032840 SPRYD3 1 0.32 0.18 11 -3.97 0 10 4 No 14 0.31 No 0 0 No -26 0.86 Yes 44 87.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 50490733 - NM_020456 SPRYD7 1 0.15 0.13 7 10.67 85.66 55 5.83 Yes 42 2.3 Yes 0 0 No -35 0.88 Yes 35 89.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 50492358 - NM_020456 SPRYD7 1 1.87 1.78 53 5.6 79.34 38 6.52 Yes 74 -5.57 No 0 0 No -24 0.67 Yes 46 80.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 50494380 - NM_020456 SPRYD7 1 0.59 0.54 29 7.49 87 59 6.68 Yes 46 1.76 Yes 0 0 No -58 0.66 No 12 66.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 50499945 - NM_020456 SPRYD7 1 0.33 0.21 13 12.54 95.65 32 6.97 Yes 19 2.02 Yes 0 0 No -31 0.96 Yes 39 96.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 50505918 - NM_020456 SPRYD7 1 1.4 0.64 31 6.28 86.16 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.65 No 51 81.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 50510129 - NM_020456 SPRYD7 1 1.18 0.5 25 8.95 88.62 20 6.33 Yes 57 -1.24 No 0 0 No -19 0.65 No 51 61.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1827465 - NM_001324081 SPSB3 1 0.59 0.24 15 5.72 77.24 33 6 Yes 40 -1.28 No 22 0.91 Yes -29 0.81 Yes 41 87.02 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 1828341 - NM_001324081 SPSB3 1 0.79 0.21 12 -3.76 0 14 4.47 No 1 -0.46 No 24 0.6 Yes -20 0.42 No 57 47.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 1828609 - NM_001324081 SPSB3 1 0.73 0.15 7 4.01 0 28 5.66 Yes 15 1.14 Yes 0 0 No -27 0.73 Yes 43 73.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131315437 + NM_001195532 SPTAN1 1 0.31 0.18 12 1.98 66.42 12 5.66 Yes NA NA NA 0 0 No -25 0.94 Yes 45 83.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131338999 + NM_001195532 SPTAN1 1 0.08 0.15 8 9.36 85.68 28 7.38 Yes 15 1.65 Yes 0 0 No -27 0.89 Yes 43 92.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131346554 + NM_001195532 SPTAN1 1 0.04 0.1 7 2.86 0 24 5.38 No 11 0.44 No 29 0.68 Yes -24 0.52 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 131369257 + NM_001195532 SPTAN1 1 0.12 0.17 9 9.51 76.11 34 7.28 Yes 21 1.55 Yes 0 0 No -33 0.66 No 37 76.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 131371929 + NM_001195532 SPTAN1 1 11.7 22.42 72 8.44 82.04 31 6.74 Yes 18 1.55 Yes 30 0.87 Yes -30 0.65 No 40 89.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 131383945 + NM_001195532 SPTAN1 1 0.3 0.46 25 14.7 95.61 31 5.48 No 18 1.8 Yes 0 0 No -30 0.74 Yes 40 78.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131391403 + NM_001195532 SPTAN1 1 0.07 0.1 7 6.37 82.12 25 8.12 Yes 12 0.46 No 0 0 No -24 0.94 Yes 46 95.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 54859705 + NM_178313 SPTBN1 1 0.04 0.19 12 -17.43 62.92 37 7.08 Yes 24 0.59 No 0 0 No -36 0.76 Yes 34 83.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 54874276 + NM_178313 SPTBN1 1 0.09 0.28 18 -6.84 0 13 4.24 No 17 1.13 Yes 0 0 No -29 0.61 No 41 85.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 54885878 + NM_178313 SPTBN1 1 0.06 0.22 13 3.84 72.67 31 7.59 Yes 18 0.79 Yes 0 0 No -30 0.74 Yes 40 64.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 94794809 - NM_006415 SPTLC1 1 0.77 1.33 52 -2.26 59.38 35 5.85 Yes 47 0.52 No 0 0 No -59 0.68 Yes 11 67.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 94796349 - NM_006415 SPTLC1 1 0.24 0.39 20 6.67 87.47 23 5.28 No 15 -1 No 0 0 No -22 0.53 No 48 51.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 94808617 - NM_006415 SPTLC1 1 0.17 0.28 16 4.85 78.45 24 5.38 No 11 0.58 No 0 0 No -30 0.46 No 43 46.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 94811516 - NM_006415 SPTLC1 1 0.48 0.56 25 6.36 77.29 25 5.38 No 12 -1.82 No 0 0 No -24 0.48 No 48 48.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 94812774 - NM_006415 SPTLC1 1 0.35 0.5 27 3.82 83.58 23 6.24 Yes 10 1.46 Yes 0 0 No -22 0.91 Yes 48 93.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 94832579 - NM_006415 SPTLC1 1 0.1 0.15 10 10.93 83.9 17 5.28 No 32 0.31 No 0 0 No -40 0.48 No 37 75.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 94832686 - NM_006415 SPTLC1 1 0.06 0.11 8 2.99 70.79 26 5.66 Yes 64 0.65 No 0 0 No -25 0.67 Yes 45 75.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 94839318 - NM_006415 SPTLC1 1 0.38 0.61 33 8.37 91.52 31 5.88 Yes 18 0.18 No 0 0 No -30 0.62 No 40 73.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 94841849 - NM_006415 SPTLC1 1 5.94 9.53 72 7.42 87.44 11 5 No 74 -3.77 No 23 0.52 Yes -26 0.47 No 47 64.13 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 94842367 - NM_006415 SPTLC1 1 0.11 0.32 17 -3.49 0 32 5.38 No 12 0.48 No 0 0 No -31 0.71 Yes 39 69.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 94870352 - NM_006415 SPTLC1 1 2.95 6.42 72 8.55 94.04 38 6.87 Yes 25 1.37 Yes 37 0.72 Yes -37 0.39 No 33 59.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 94877349 - NM_006415 SPTLC1 1 0.75 0.97 38 3.6 63.76 43 6.78 Yes 16 0.12 No 21 0.83 Yes -21 0.69 Yes 49 70.89 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 78032159 - NM_004863 SPTLC2 1 0.78 0.56 26 5.17 88.59 23 5.2 No 43 0.72 No 0 0 No -22 0.62 No 48 79.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 78042312 - NM_004863 SPTLC2 1 0.33 0.21 10 5.11 79.36 31 5.91 Yes 73 0.76 No 0 0 No -19 0.66 Yes 51 68.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 18633101 - NM_194285 SPTY2D1 1 0.14 0.19 12 -14.19 0 41 6.72 Yes 28 0.69 No 0 0 No -25 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 18633117 - NM_194285 SPTY2D1 1 0.06 0.1 7 2.26 0 25 5.48 No 51 0.56 No 24 0.79 Yes -24 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 18633999 - NM_194285 SPTY2D1 1 0.14 0.22 13 0.9 66.67 32 6 Yes 52 0.75 No 0 0 No -31 0.92 Yes 39 76.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 18638532 - NM_194285 SPTY2D1 1 0.26 0.25 17 0.87 0 29 7.13 Yes 16 1.95 Yes 0 0 No -28 0.82 Yes 42 85.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 126012141 + NM_003129 SQLE 1 0.06 0.13 7 4.51 83.69 21 4.66 No 73 1.23 Yes 24 0.74 Yes -24 0.59 No 46 47.92 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 126015422 + NM_003129 SQLE 1 0.21 0.47 23 1.58 0 26 6.08 Yes 34 0.45 No 0 0 No -25 0.63 No 45 66.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 126017772 + NM_003129 SQLE 1 0.15 0.38 21 -3.69 0 15 3.87 No 30 0.64 No 0 0 No -33 0.66 No 37 79.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 126019663 + NM_003129 SQLE 1 0.37 0.63 29 4.94 81.45 18 4.56 No 60 0.04 No 0 0 No -21 0.86 Yes 49 90.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 45983142 + NM_001271213 SQRDL 1 0.18 0.19 13 10.7 92.91 31 5.24 No 18 1.67 Yes 24 0.76 Yes -30 0.74 Yes 40 83.72 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 179249988 + NM_003900 SQSTM1 1 0.16 0.39 20 6.69 86.72 29 5.92 Yes 44 1.45 Yes 24 0.89 Yes -31 0.5 No 14 55.92 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 179250833 + NM_003900 SQSTM1 1 0.03 0.11 7 2.22 65.23 18 4.9 No 5 -1.81 No 26 0.81 Yes -17 0.54 No 53 34.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 179250859 + NM_003900 SQSTM1 1 0.15 0.5 25 -1.95 74.81 34 4.71 No 3 0.21 No 0 0 No -28 0.71 Yes 42 75.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 179253185 + NM_003900 SQSTM1 1 0.12 0.63 29 3.17 84.41 26 8.03 Yes 38 1.96 Yes 0 0 No -25 0.97 Yes 45 97.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179260592 + NM_003900 SQSTM1 1 1.46 9.14 72 -2.07 0 9 3.87 No 13 0.88 Yes 0 0 No -25 0.94 Yes 45 96.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179263437 + NM_003900 SQSTM1 1 0.02 0.11 8 -0.97 76.05 27 6.64 Yes 14 1.1 Yes 18 0.93 Yes -26 0.92 Yes 44 92.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 179263470 + NM_003900 SQSTM1 1 0.33 2.08 58 5.68 0 19 4.57 No 17 1.16 Yes 18 0.93 Yes -18 0.8 Yes 52 89.52 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 139930749 - NM_001035235 SRA1 1 0.05 0.11 8 0.46 0 9 3.87 No 21 0.35 No 25 0.8 Yes -33 0.83 Yes 37 56.79 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 139930752 - NM_001035235 SRA1 1 0.25 0.63 35 2.54 74.93 31 5.57 Yes 18 0.36 No 25 0.8 Yes -30 0.84 Yes 40 61.1 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 139936918 - NM_001035235 SRA1 1 0.67 1.1 46 7.86 85.01 26 5.66 Yes 13 -0.04 No 25 0.89 Yes -25 0.89 Yes 45 83.23 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 45629133 - NM_018079 SRBD1 1 0.31 0.22 12 8.98 81.86 32 6.16 Yes 19 1.07 Yes 0 0 No -31 0.95 Yes 39 96.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 45671467 - NM_018079 SRBD1 1 1.1 0.89 37 9.06 85.19 33 5.93 Yes -4 1.08 Yes 0 0 No -32 0.49 No 40 53.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 45671467 - NM_018079 SRBD1 1 0.24 0.19 13 9.06 85.19 33 5.93 Yes -4 1.08 Yes 0 0 No -32 0.49 No 40 53.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 45674579 - NM_018079 SRBD1 1 0.21 0.18 11 2.2 0 36 7.21 Yes 23 1.22 Yes 0 0 No -35 0.72 Yes 35 79.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 45773500 - NM_018079 SRBD1 1 10.97 6.15 70 6.86 79.38 23 5 No 10 1.32 Yes 0 0 No -22 0.8 Yes 48 74.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 45773973 - NM_018079 SRBD1 1 0.21 0.18 10 0.51 0 10 3.87 No 14 0.27 No 0 0 No -34 0.83 Yes 36 87.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 45781312 - NM_018079 SRBD1 1 0.29 0.26 15 9.93 93.67 16 5.57 Yes 34 -1.2 No 0 0 No -27 0.59 No 43 44.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 45810540 - NM_018079 SRBD1 1 0.32 0.29 14 8.49 92.89 24 4.25 No 17 0.6 No 0 0 No -29 0.53 No 41 65.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 45826970 - NM_018079 SRBD1 1 0.29 0.21 13 -2.47 0 37 7.91 Yes 72 0.92 Yes 0 0 No -36 0.56 No 34 71.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 45829247 - NM_018079 SRBD1 1 0.21 0.11 7 -0.66 82.55 26 7.67 Yes 13 1.22 Yes 21 0.31 Yes -25 0.51 No 45 57.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 45831199 - NM_018079 SRBD1 1 0.64 0.4 24 4.32 76.38 21 6.18 Yes 8 0.43 No 0 0 No -20 0.88 Yes 50 81.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 35973451 + NM_005417 SRC 1 17.42 3.17 63 9.56 82.59 27 5.57 Yes 46 1.15 Yes 0 0 No -30 0.65 No 40 87.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 35975520 + NM_005417 SRC 1 0.35 0.13 8 8.42 84.53 22 5.99 Yes 9 1.12 Yes 0 0 No -21 0.97 Yes 49 93.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36002503 + NM_005417 SRC 1 0.59 0.88 36 11.39 88.27 32 4.6 No 8 0.9 Yes 0 0 No -27 0.51 No 43 84.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 36005677 + NM_005417 SRC 1 0.07 0.11 8 8.53 84.84 16 5.57 Yes 3 1.65 Yes 0 0 No -25 0.31 No 45 57.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 36005807 + NM_005417 SRC 1 0.22 0.39 23 2.97 81.19 21 4.69 No -4 1.51 Yes 0 0 No -20 0.95 Yes 50 92.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36009041 + NM_005417 SRC 1 0.69 1.06 42 5.69 70.18 26 5.16 No 31 0.04 No 0 0 No -29 0.67 Yes 41 72.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 36012159 + NM_005417 SRC 1 1.78 2.13 64 2.56 0 36 7.94 Yes 56 1.56 Yes 0 0 No -35 0.68 Yes 35 76.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36012320 + NM_005417 SRC 1 0.11 0.14 10 5.76 82.63 21 7.21 Yes 8 1.4 Yes 0 0 No -20 0.88 Yes 50 93.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36012323 + NM_005417 SRC 1 0.26 0.31 19 5.94 85.65 24 7.42 Yes 11 1.38 Yes 0 0 No -23 0.92 Yes 47 93.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36012515 + NM_005417 SRC 1 0.1 0.13 9 -2.88 0 15 4.5 No NA NA NA 24 0.9 Yes -28 0.09 No 56 11.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 36012530 + NM_005417 SRC 1 0.16 0.19 14 5.52 82.41 23 4 No NA NA NA 24 0.9 Yes -17 0.4 No 53 78.13 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 36014813 + NM_005417 SRC 1 0.12 0.14 7 7.67 86.4 29 7.42 Yes NA NA NA 0 0 No -28 0.51 No 42 71.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 36015784 + NM_005417 SRC 1 0.12 0.18 12 7.66 84.1 15 7 Yes 2 1.54 Yes 0 0 No -32 0.72 Yes 38 85.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36015833 + NM_005417 SRC 1 1.22 1.54 55 9.78 88.62 31 5.48 No 51 1.44 Yes 0 0 No -30 0.86 Yes 40 84.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36018993 + NM_005417 SRC 1 0.12 0.17 9 4.6 79.69 20 5.57 Yes 7 1.07 Yes 0 0 No -19 0.71 Yes 51 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36026026 + NM_005417 SRC 1 0.08 0.15 10 5.25 74.62 26 6.3 Yes 35 -3.23 No 0 0 No -25 0.74 Yes 45 66.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 36026630 + NM_005417 SRC 1 0.23 0.32 17 0.72 65.67 25 5.2 No 75 0.84 Yes 0 0 No -24 0.87 Yes 46 89.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 36032549 + NM_005417 SRC 1 0.52 0.57 25 10.14 90.19 48 6.86 Yes 75 -3.99 No 0 0 No -28 0.8 Yes 42 63.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 30721134 + NM_006662 SRCAP 1 1.69 2.69 65 7.73 87.67 25 6 Yes 32 1.1 Yes 20 0.81 Yes -24 0.83 Yes 46 61.75 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 30722324 + NM_006662 SRCAP 1 0.1 0.17 7 -0.67 0 30 7.28 Yes 17 1.18 Yes 0 0 No -29 0.89 Yes 41 81.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30724576 + NM_006662 SRCAP 1 0.36 0.39 24 2.73 67.35 33 4.63 No 74 0.72 No 0 0 No -23 0.71 Yes 38 53.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 30724588 + NM_006662 SRCAP 1 0.12 0.14 8 2.48 0 18 4.58 No 23 -1.9 No 0 0 No -17 0.74 Yes 53 47.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 30724933 + NM_006662 SRCAP 1 0.26 0.38 23 5.97 82.62 31 6.24 Yes 63 1.29 Yes 0 0 No -30 0.7 Yes 44 65.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 30733445 + NM_006662 SRCAP 1 0.11 0.11 8 7.86 94.73 23 5.38 No 10 0.45 No 0 0 No -26 0.78 Yes 44 79.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30733445 + NM_006662 SRCAP 1 0.99 0.88 41 7.86 94.73 23 5.38 No 10 0.45 No 0 0 No -26 0.78 Yes 44 79.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30745038 + NM_006662 SRCAP 1 2.01 2.35 63 6.98 87.3 20 5.57 Yes 20 0.69 No 0 0 No -22 0.61 No 50 61.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 30745819 + NM_006662 SRCAP 1 1.51 1.92 54 4.99 76.42 30 6.25 Yes 17 2.15 Yes 0 0 No -29 0.8 Yes 41 72.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 6653559 + NM_001324323 SRD5A1 1 9.29 3.15 65 3.07 72.71 34 10.19 Yes 21 1.17 Yes 33 0.81 Yes -33 0.84 Yes 37 83.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 6653561 + NM_001324323 SRD5A1 1 0.89 0.31 17 -5.38 72.05 36 10.28 Yes 23 1.16 Yes 0 0 No -35 0.83 Yes 35 82.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 6657257 + NM_001324323 SRD5A1 1 0.2 0.11 7 7.37 76.98 35 4.88 No 12 0.19 No 0 0 No -30 0.84 Yes 40 86.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 6660070 + NM_001324323 SRD5A1 1 0.66 0.36 21 6.47 87.55 27 5.4 No 64 1.43 Yes 0 0 No -26 0.57 No 44 75.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 6665578 + NM_001324323 SRD5A1 1 0.3 0.14 10 10 86.67 34 5.6 Yes 14 1.15 Yes 0 0 No -33 0.69 Yes 37 82.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 56217263 + NM_024592 SRD5A3 1 1.43 0.33 20 3.62 0 28 7.14 Yes 15 1.21 Yes 0 0 No -27 0.84 Yes 43 82.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 17720906 - NM_001321096 SREBF1 1 1.59 0.57 30 7.19 75.79 26 5.48 No 13 1.77 Yes 25 0.96 Yes -25 0.92 Yes 45 95.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 17721662 - NM_001321096 SREBF1 1 0.71 0.35 19 2.81 76.01 25 5.28 No 57 0.74 No 26 0.85 Yes -24 0.65 No 46 58.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 42234933 + NR_103834 SREBF2 1 0.09 0.14 9 11.93 89.01 31 8.49 Yes 18 1.7 Yes 0 0 No -30 0.93 Yes 40 94.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42236968 + NR_103834 SREBF2 1 0.17 0.28 17 11.42 89.79 31 7.42 Yes 18 1.09 Yes 0 0 No -30 0.93 Yes 40 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42263070 + NR_103834 SREBF2 1 0.21 0.35 20 9.73 84.16 40 5.06 No 36 0.98 Yes 0 0 No -39 0.76 Yes 31 70.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42264622 + NR_103834 SREBF2 1 0.07 0.33 20 -0.01 0 12 4.12 No 29 1.52 Yes 0 0 No -41 0.95 Yes 29 97.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42271394 + NR_103834 SREBF2 1 0.07 0.25 17 3.71 76.63 21 5.44 No 71 1.68 Yes 18 0.56 Yes -20 0.71 Yes 50 54.09 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr22 42271397 + NR_103834 SREBF2 1 0.05 0.18 11 1.58 76.94 24 5.67 Yes 74 1.68 Yes 18 0.56 Yes -23 0.71 Yes 47 56.94 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr22 42271528 + NR_103834 SREBF2 1 0.06 0.24 14 2.77 87.46 22 4.8 No 9 0.01 No 23 0.96 Yes -21 0.36 No 49 48.89 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 42282003 + NR_103834 SREBF2 1 0.35 1.13 45 5.7 79.99 40 6.85 Yes 11 1.19 Yes 0 0 No -23 0.62 No 31 77.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 42282086 + NR_103834 SREBF2 1 0.12 0.36 21 8.84 88.92 26 5.39 No 60 1.19 Yes 0 0 No -25 0.85 Yes 45 88.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42282272 + NR_103834 SREBF2 1 0.12 0.39 22 10.84 84.63 45 7.04 Yes 32 0.81 Yes 21 0.68 Yes -21 0.68 Yes 36 48.99 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr22 42287253 + NR_103834 SREBF2 1 0.08 0.26 16 8.3 80.03 26 5.12 No 21 1.33 Yes 25 0.85 Yes -25 0.85 Yes 45 81.41 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 42293067 + NR_103834 SREBF2 1 0.24 0.33 20 1.98 0 11 4.58 No 31 0.41 No 27 0.68 Yes -37 0.59 No 33 86.34 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr22 42293825 + NR_103834 SREBF2 1 0.1 0.19 14 6.36 75.83 23 7.05 Yes 10 1.96 Yes 0 0 No -22 0.84 Yes 48 90.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65451892 + NM_139168 SREK1 1 157.69 8.04 71 4.74 72.99 47 8.16 Yes 76 1.03 Yes 23 0.44 Yes -46 0.62 No 24 68.81 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 65460435 + NM_139168 SREK1 1 2.11 2.13 62 6.2 84.1 29 6.29 Yes 19 -2.91 No 25 0.71 Yes -31 0.59 No 39 70.26 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 65460593 + NM_139168 SREK1 1 0.1 0.11 7 -2.01 66.29 17 4.7 No 13 0.54 No 21 0.83 Yes -38 0.83 Yes 32 88.66 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 65465884 + NM_139168 SREK1 1 0.71 0.97 37 -1 0 9 3.87 No 12 1.45 Yes 0 0 No -24 0.51 No 46 79.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 65467709 + NM_139168 SREK1 1 0.18 0.22 13 7.36 78.95 24 5.95 Yes 11 1.73 Yes 0 0 No -23 0.89 Yes 47 71.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 65473344 + NM_139168 SREK1 1 16.91 17.56 72 3.32 86 24 6.37 Yes 11 0.95 Yes 20 0.82 Yes -23 0.6 No 47 71.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 64049525 - NM_173829 SREK1IP1 1 0.14 0.18 11 3.16 75.38 23 4.06 No 22 0.35 No 0 0 No -23 0.76 Yes 44 67.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 64050598 - NM_173829 SREK1IP1 1 0.17 0.19 12 4.56 79.82 28 6.24 Yes 15 0.23 No 34 0.42 Yes -27 0.64 No 43 81.88 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 64051518 - NM_173829 SREK1IP1 1 0.16 0.17 11 8.27 78.93 49 7.11 Yes 43 1.18 Yes 0 0 No -31 0.8 Yes 39 59.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 64060949 - NM_173829 SREK1IP1 1 5.24 5.58 72 9.33 84.58 42 6.49 Yes 29 0.48 No 25 0.45 Yes -35 0.63 No 35 69.96 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 43143809 + NM_003131 SRF 1 0.1 0.18 12 6.43 86.32 24 5.28 No 35 0.64 No 0 0 No -23 0.66 Yes 47 66.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 43143865 + NM_003131 SRF 1 0.21 0.36 22 6.74 85.1 29 5.45 No 16 1.01 Yes 0 0 No -28 0.79 Yes 42 87.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 121305334 + NM_152546 SRFBP1 1 0.15 0.11 8 7.81 83.08 33 5.61 Yes -4 0.36 No 0 0 No -27 0.76 Yes 43 73.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 121354958 + NM_152546 SRFBP1 1 0.15 0.18 13 0.33 0 51 6.29 Yes 71 0.39 No 0 0 No -25 0.46 No 31 56.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 206541757 + NM_001300952 SRGAP2 1 0.39 0.13 9 9.48 90.95 35 5.37 No 15 0.55 No 0 0 No -27 0.92 Yes 43 95.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 206574779 + NM_001300952 SRGAP2 1 584.58 35.63 72 10.3 84.61 23 7.48 Yes 10 1.44 Yes 22 0.87 Yes -22 0.96 Yes 48 97.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 206628223 + NM_001300952 SRGAP2 1 120.12 8.22 72 9.34 83.04 64 10.81 Yes 51 1.91 Yes 23 0.44 Yes -63 0.43 No 50 23.23 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 70852820 + NM_002727 SRGN 1 0.03 0.96 39 5.89 84.36 25 4.16 No 28 0.7 No 0 0 No -24 0.93 Yes 46 96.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 70856944 + NM_002727 SRGN 1 0.01 0.38 19 7.93 81.41 34 5.05 No 39 -2.48 No 0 0 No -19 0.47 No 51 41.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 70863630 + NM_002727 SRGN 1 0.01 0.5 25 -4.79 0 80 7.92 Yes 53 0.21 No 0 0 No -39 0.69 Yes 31 72.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 70863627 + NM_002727 SRGN 1 0.02 1.33 51 -11.97 0 77 7.81 Yes 50 0.22 No 0 0 No -36 0.72 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 70863630 + NM_002727 SRGN 1 0.22 12.08 72 -4.79 0 80 7.92 Yes 53 0.21 No 0 0 No -39 0.69 Yes 31 72.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 87837877 - NM_003130 SRI 1 0.44 3.75 64 2.52 0 28 5.92 Yes 56 1.5 Yes 0 0 No -21 0.28 No 42 43.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 87839337 - NM_003130 SRI 1 0.03 0.21 15 -13.48 0 16 4.12 No 3 0.56 No 0 0 No -15 0.84 Yes 55 51.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 87839444 - NM_003130 SRI 1 0.23 1.22 54 -18.66 0 15 3.98 No 53 0.99 Yes 0 0 No -28 0.67 Yes 42 32.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 87839451 - NM_003130 SRI 1 0.09 0.5 27 4.28 81.32 15 5.29 No 46 1.01 Yes 19 0.64 Yes -21 0.76 Yes 49 74.23 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 87839470 - NM_003130 SRI 1 0.1 0.58 32 -0.13 64.99 28 5.25 No 67 1.34 Yes 19 0.64 Yes -27 0.37 No 24 59.51 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 87839489 - NM_003130 SRI 1 0.06 0.33 21 7.45 75.87 38 5.13 No 48 1.35 Yes 19 0.64 Yes -27 0.76 Yes 43 89.79 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 87839907 - NM_003130 SRI 1 0.04 0.26 16 0.82 70.13 40 4.84 No 1 0.95 Yes 0 0 No -20 0.52 No 51 42.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 11114976 - NM_003132 SRM 1 0.08 0.75 34 -8.11 0 11 4.12 No NA NA NA 21 0.94 Yes -14 0.52 No 24 25.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 11115127 - NM_003132 SRM 1 0.09 0.88 36 0.41 75.37 18 4.68 No 27 1.68 Yes 0 0 No -39 0.88 Yes 31 70.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11115465 - NM_003132 SRM 1 0.12 1.03 42 3.48 76.52 26 6.57 Yes 68 -4.54 No 0 0 No -25 0.89 Yes 45 78.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 11115994 - NM_003132 SRM 1 0.19 1.46 52 1.5 68.7 9 5.74 Yes -4 1.1 Yes 18 0.87 Yes -8 0.37 No 62 55.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 11116176 - NM_003132 SRM 1 0.02 0.19 8 -4.78 0 18 4.24 No 23 -1.36 No 26 0.94 Yes -17 0.71 Yes 53 57.22 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 11119438 - NM_003132 SRM 1 0.34 1.4 45 6.63 84.71 38 6.32 Yes 25 0.54 No 37 0.34 Yes -37 0.93 Yes 33 96.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 40329557 - NM_003134 SRP14 1 1.95 13.04 72 7.17 85.62 24 4.86 No -1 1.85 Yes 23 0.94 Yes -23 0.7 Yes 47 75.63 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 40330640 - NM_003134 SRP14 1 0.02 0.15 10 3.69 79.19 40 7.08 Yes 27 1.54 Yes 0 0 No -39 0.76 Yes 31 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 112200319 + NM_001204199 SRP19 1 0.04 0.1 7 -10.74 0 36 5.63 Yes 32 1.16 Yes 0 0 No -36 0.74 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 35453364 + NM_003136 SRP54 1 0.18 0.39 21 5.26 73.07 35 6.83 Yes 46 0.91 Yes 0 0 No -25 0.54 No 45 55.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 35473907 + NM_003136 SRP54 1 0.03 0.14 9 3.08 66.68 33 7.28 Yes 28 -3.29 No 0 0 No -32 0.62 No 38 63.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 35477836 + NM_003136 SRP54 1 0.11 0.44 20 1.08 0 36 7.03 Yes -2 0.84 Yes 31 0.72 Yes -28 0.5 No 42 61.77 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 35478002 + NM_003136 SRP54 1 0.03 0.11 8 2.87 62.29 33 5.65 Yes 28 0.44 No 0 0 No -43 0.87 Yes 27 80.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 35483009 + NM_003136 SRP54 1 0.04 0.14 8 -3.12 80.15 29 4.77 No 21 0.28 No 0 0 No -28 0.56 No 42 57.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 35492121 + NM_003136 SRP54 1 0.03 0.11 7 -3.22 0 11 3.87 No 7 1.92 Yes 0 0 No -23 0.6 No 47 53.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 74040021 - NM_014230 SRP68 1 0.05 0.11 7 5.1 86.96 22 4.99 No 50 0.89 Yes 0 0 No -21 0.61 No 46 68.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 74044046 - NM_014230 SRP68 1 0.07 0.22 12 -2.15 0 10 3.68 No 14 0.3 No 0 0 No -33 0.83 Yes 37 92.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 74044142 - NM_014230 SRP68 1 0.05 0.14 10 7.17 85.72 25 5.1 No 12 0.26 No 0 0 No -24 0.96 Yes 46 98.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 74057300 - NM_014230 SRP68 1 0.04 0.11 7 -13.5 0 32 6.6 Yes 19 1.33 Yes 0 0 No -31 0.45 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 74060919 - NM_014230 SRP68 1 0.17 0.47 27 4.74 84.41 36 8.04 Yes 23 0.83 Yes 0 0 No -35 0.38 No 35 52.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 74066518 - NM_014230 SRP68 1 0.1 0.38 20 1.74 0 16 4.12 No 9 1 Yes 25 0.68 Yes -22 0.65 No 48 74.35 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 57335826 + NM_006947 SRP72 1 0.03 0.13 8 1.39 0 11 4.12 No 20 0.96 Yes 0 0 No -32 0.42 No 38 57.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 57337907 + NM_006947 SRP72 1 0.04 0.18 12 6.33 78.97 21 5.57 Yes 8 1.78 Yes 0 0 No -52 0.44 No 46 60.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 57340416 + NM_006947 SRP72 1 0.02 0.13 8 4.83 77.02 23 5.1 No 38 0.25 No 23 0.93 Yes -22 0.76 Yes 48 83.84 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 57340448 + NM_006947 SRP72 1 0.03 0.18 11 -10.6 65.54 27 6.33 Yes 14 0.74 No 0 0 No -26 0.46 No 43 50.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 57352500 + NM_006947 SRP72 1 0.03 0.11 8 -0.19 0 13 4.36 No 28 0.43 No 0 0 No -46 0.45 No 24 46.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 57357602 + NM_006947 SRP72 1 0.03 0.1 7 -1.73 0 11 3.87 No 13 1.25 Yes 0 0 No -34 0.35 No 45 60.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 57360114 + NM_006947 SRP72 1 0.39 1.86 61 6.92 86.96 28 5.74 Yes 71 -4.85 No 0 0 No -31 0.7 Yes 39 82.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 57361526 + NM_006947 SRP72 1 0.03 0.17 10 3.94 0 28 5.23 No 15 1.19 Yes 0 0 No -27 0.79 Yes 43 76.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 225972961 + NM_001130440 SRP9 1 1.79 1.29 48 8.95 85.86 24 7.41 Yes 11 1.42 Yes 0 0 No -23 0.81 Yes 47 88.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 225972964 + NM_001130440 SRP9 1 0.31 0.24 13 5.79 87 27 7.61 Yes 14 1.39 Yes 0 0 No -26 0.82 Yes 44 90.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 225974565 + NM_001130440 SRP9 1 0.74 0.53 28 -0.56 84.41 24 6.72 Yes 75 1.12 Yes 0 0 No -23 0.9 Yes 47 88.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 225975412 + NM_001130440 SRP9 1 0.25 0.14 8 2.65 66.7 61 8.35 Yes 48 1.37 Yes 0 0 No -30 0.33 No 40 64.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 225975672 + NM_001130440 SRP9 1 14.73 7.54 72 6.91 83.72 14 4.35 No 1 1.3 Yes 0 0 No -22 0.65 No 48 82.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 225976735 + NM_001130440 SRP9 1 2.57 1.32 49 6.12 91.4 21 4.55 No 17 1.2 Yes 20 0.88 Yes -20 0.9 Yes 50 86.75 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 225976960 + NM_001130440 SRP9 1 24.15 12.51 72 5.07 65.83 24 5.29 No 42 -4.56 No 0 0 No -23 0.87 Yes 47 79.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 225975412 + NM_001130440 SRP9 1 0.4 0.21 11 2.65 66.7 61 8.35 Yes 48 1.37 Yes 0 0 No -30 0.33 No 40 64.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 225975672 + NM_001130440 SRP9 1 3.44 1.85 63 6.91 83.72 14 4.35 No 1 1.3 Yes 0 0 No -22 0.65 No 48 82.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 225976735 + NM_001130440 SRP9 1 0.33 0.18 12 6.12 91.4 21 4.55 No 17 1.2 Yes 20 0.88 Yes -20 0.9 Yes 50 86.75 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 225976960 + NM_001130440 SRP9 1 3.19 1.69 58 5.07 65.83 24 5.29 No 42 -4.56 No 0 0 No -23 0.87 Yes 47 79.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 35801788 - NM_003137 SRPK1 1 0.13 0.26 14 11.66 91.46 29 5.47 No 69 -2.76 No 0 0 No -28 0.44 No 42 48.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35804703 - NM_003137 SRPK1 1 0.12 0.19 13 9.86 78.05 14 4.77 No 53 1.05 Yes 0 0 No -24 0.49 No 37 58.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 35806186 - NM_003137 SRPK1 1 0.05 0.11 8 3.79 70.94 19 5.48 No 54 0.43 No 0 0 No -25 0.39 No 47 35.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35807893 - NM_003137 SRPK1 1 0.14 0.28 13 5.49 97.1 20 5 No 7 1.04 Yes 0 0 No -19 0.54 No 51 69.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 35822209 - NM_003137 SRPK1 1 0.06 0.14 9 4.33 68.24 40 5.42 No 48 0.54 No 0 0 No -27 0.57 No 43 52.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35824287 - NM_003137 SRPK1 1 0.11 0.26 15 -6.26 0 18 3.72 No 70 0.46 No 0 0 No -40 0.56 No 50 50.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35836916 - NM_003137 SRPK1 1 0.3 0.63 33 7.72 77.61 29 5.43 No 52 1.84 Yes 28 0.96 Yes -28 0.96 Yes 42 97.72 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 35837676 - NM_003137 SRPK1 1 0.6 1.68 55 1.55 79.42 47 8.76 Yes 34 1.05 Yes 0 0 No -34 0.7 Yes 36 65.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 35838733 - NM_003137 SRPK1 1 0.18 0.36 18 1.95 0 28 6.48 Yes 15 1.07 Yes 0 0 No -27 0.96 Yes 43 97.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35840554 - NM_003137 SRPK1 1 0.07 0.22 15 9.15 90.87 51 8.36 Yes 5 0.72 No 0 0 No -30 0.72 Yes 40 47.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 35857710 - NM_003137 SRPK1 1 0.21 0.46 24 7.67 85.86 28 7.68 Yes 15 1.54 Yes 0 0 No -27 0.95 Yes 43 96.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35858818 - NM_003137 SRPK1 1 0.67 1.06 42 1.1 0 28 5.86 Yes 73 1.18 Yes 27 0.52 Yes -28 0.41 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 35858819 - NM_003137 SRPK1 1 4.93 7.39 72 -2.12 0 27 5.8 Yes 72 1.18 Yes 19 0.74 Yes -27 0.41 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 35872752 - NM_003137 SRPK1 1 1.92 2.78 64 11.07 87.19 33 5.94 Yes 20 1.09 Yes 25 0.69 Yes -32 0.56 No 38 65.1 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 35885216 - NM_003137 SRPK1 1 0.36 0.54 25 10.04 93.5 35 5.43 No 11 0.93 Yes 0 0 No -23 0.57 No 47 88.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 104766198 - NM_182692 SRPK2 1 0.42 0.25 16 3.02 75.29 29 6.31 Yes 16 1.09 Yes 0 0 No -28 0.71 Yes 42 80.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 104766322 - NM_182692 SRPK2 1 7.67 4.97 70 7.31 84.29 50 7.94 Yes 33 0.38 No 44 0.09 Yes -49 0.82 Yes 21 89.09 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 104766322 - NM_182692 SRPK2 1 32.22 20.38 72 7.31 84.29 50 7.94 Yes 33 0.38 No 44 0.09 Yes -49 0.82 Yes 21 89.09 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 104843143 - NM_182692 SRPK2 1 0.4 0.25 15 4.59 82.43 23 5 No 10 0.26 No 0 0 No -22 0.92 Yes 48 92.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 104909317 - NM_182692 SRPK2 1 5.81 1.26 53 8.7 90.82 22 6.68 Yes -2 1.09 Yes 21 0.27 Yes -21 0.6 No 49 63.02 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 104947019 - NM_182692 SRPK2 1 4.1 0.97 40 10.75 98.6 21 6.93 Yes 8 1.3 Yes 23 0.79 Yes -23 0.81 Yes 47 81.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 105001418 - NM_182692 SRPK2 1 1.25 0.31 20 4.24 76.22 47 8.72 Yes 34 1.33 Yes 0 0 No -46 0.77 Yes 24 94.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 126135095 - NM_001177842 SRPRA 1 0.1 0.35 17 7.02 74.34 41 7.68 Yes 28 1.79 Yes 24 0.84 Yes -40 0.73 Yes 30 89.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 126136426 - NM_001177842 SRPRA 1 0.07 0.4 24 -1.53 76.7 23 4.69 No 72 -6.04 No 0 0 No -22 0.93 Yes 48 94.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 126137226 - NM_001177842 SRPRA 1 0.03 0.11 7 -0.37 0 28 6.24 Yes 15 0.38 No 0 0 No -27 0.4 No 44 56.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 133535702 + NM_021203 SRPRB 1 0.03 0.18 7 3.55 69.28 23 6.91 Yes 10 0.8 Yes 24 0.91 Yes -22 0.95 Yes 48 92.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 133536843 + NM_021203 SRPRB 1 0.03 0.14 9 8.98 87.24 19 6.98 Yes 65 0.27 No 0 0 No -30 0.43 No 40 66.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 2208587 + NM_021947 SRR 1 2.11 0.36 19 8.97 92.45 15 5.57 Yes 39 0.68 No 0 0 No -29 0.65 No 41 51.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 2213070 + NM_021947 SRR 1 1.39 0.22 13 5.24 82.77 62 8.12 Yes 49 1.05 Yes 0 0 No -24 0.63 No 46 73.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 2224817 + NM_021947 SRR 1 1.75 0.42 20 1.98 71.18 62 7.72 Yes 74 0.73 No 22 0.97 Yes -23 0.63 No 47 37.16 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 26883948 + NM_001013694 SRRD 1 6.76 5.19 67 5.09 86.16 54 8.97 Yes 41 1.74 Yes 0 0 No -30 0.69 Yes 40 75.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24973569 + NM_001303449 SRRM1 1 2.64 10.06 72 4.72 75.25 42 5.33 No 58 0.63 No 27 0.9 Yes -27 0.91 Yes 43 91.39 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 24977055 + NM_001303449 SRRM1 1 0.12 0.44 23 9 92.32 24 5.07 No 68 1.45 Yes 28 0.78 Yes -28 0.71 Yes 42 87.78 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 24977911 + NM_001303449 SRRM1 1 0.13 0.5 28 -2.29 0 20 4.58 No 71 1.61 Yes 0 0 No -34 0.58 No 36 37.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 24977926 + NM_001303449 SRRM1 1 0.13 0.5 26 6.89 79.07 23 4.78 No 73 1.39 Yes 0 0 No -23 0.45 No 48 40.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 24977989 + NM_001303449 SRRM1 1 3.56 13.51 72 7.36 83.35 23 5.74 Yes 10 0.4 No 22 0.78 Yes -22 0.91 Yes 48 86.04 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 24978909 + NM_001303449 SRRM1 1 0.22 0.93 37 -7.39 34.18 17 4.97 No 42 -4.2 No 21 0.2 Yes -25 0.21 No 13 15.16 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 24979324 + NM_001303449 SRRM1 1 0.14 0.4 22 9.26 81.41 23 8.23 Yes 3 0.16 No 0 0 No -22 0.82 Yes 48 72.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 24980780 + NM_001303449 SRRM1 1 0.04 0.1 7 0.28 0 30 5.65 Yes 17 0.16 No 23 0.9 Yes -29 0.9 Yes 41 74.84 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 24980796 + NM_001303449 SRRM1 1 0.79 2.24 66 8.41 98.6 24 4 No 17 0.52 No 23 0.9 Yes -23 0.92 Yes 47 93.39 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 24981348 + NM_001303449 SRRM1 1 1.1 3.18 67 -3.69 73.1 27 5.64 Yes 61 0.68 No 0 0 No -26 0.79 Yes 44 71.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 24982142 + NM_001303449 SRRM1 1 0.65 0.58 31 10.5 90.91 27 5.74 Yes 14 1.11 Yes 0 0 No -26 0.8 Yes 44 84.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 24987803 + NM_001303449 SRRM1 1 19.04 57.63 72 -0.43 74.18 37 5 No 9 0.93 Yes 18 0.69 Yes -21 0.68 Yes 34 50.49 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 24987806 + NM_001303449 SRRM1 1 0.03 0.1 7 -6.15 0 16 3.85 No 12 0.92 Yes 0 0 No -24 0.57 No 31 52.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 24995589 + NM_001303449 SRRM1 1 0.05 0.1 7 0.64 0 11 4.12 No 30 1.36 Yes 26 0.76 Yes -42 0.69 Yes 28 75.9 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 24998675 + NM_001303449 SRRM1 1 0.04 0.13 9 -6.68 82.6 29 6.37 Yes 16 0.79 Yes 0 0 No -29 0.61 No 41 75.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 2807758 + NM_016333 SRRM2 1 0.03 0.15 8 8.25 91.61 32 11.12 Yes 19 0.7 No 25 0.83 Yes -31 0.87 Yes 39 76.13 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 2808988 + NM_016333 SRRM2 1 6.1 25.82 72 3.77 89.62 29 5.9 Yes 4 0.34 No 0 0 No -28 0.48 No 42 64.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2809747 + NM_016333 SRRM2 1 17.66 67.67 72 3.51 65.35 24 3.81 No 17 0.2 No 23 0.91 Yes -23 0.52 No 47 83.24 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 2809758 + NM_016333 SRRM2 1 0.08 0.28 18 -1.02 0 14 4.47 No 28 0.21 No 0 0 No -49 0.49 No 36 47.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2818505 + NM_016333 SRRM2 1 5.99 12.11 72 7.72 88.09 22 3.5 No 9 0.22 No 24 0.7 Yes -24 0.73 Yes 46 59.87 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 2819628 + NM_016333 SRRM2 1 1.18 2.96 65 9.82 78.69 25 7.3 Yes 12 0.33 No 27 0.47 Yes -24 0.68 Yes 46 77.43 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 2819862 + NM_016333 SRRM2 1 4.51 11.75 72 4.22 77.75 62 6.62 Yes 53 0.71 No 20 0.37 Yes -29 0.59 No 50 61.33 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 2820361 + NM_016333 SRRM2 1 0.49 1.31 50 1.98 0 12 4.24 No 56 -1.39 No 0 0 No -33 0.82 Yes 37 93.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2820607 + NM_016333 SRRM2 1 4.62 14.97 72 4.63 77.14 24 7.28 Yes 11 1.64 Yes 0 0 No -23 0.76 Yes 47 82.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2820610 + NM_016333 SRRM2 1 0.22 0.75 34 -5.36 0 10 3.87 No 14 1.63 Yes 0 0 No -26 0.76 Yes 44 81.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100475167 + NM_015908 SRRT 1 0.35 0.85 43 5.61 92.41 23 6.55 Yes 27 0.91 Yes 0 0 No -34 0.52 No 36 72.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 100476599 + NM_015908 SRRT 1 0.09 0.26 14 12.39 92.93 112 11.09 Yes 2 0.44 No 0 0 No -51 0.2 No 41 18.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100478316 + NM_015908 SRRT 1 1.56 3.69 70 10.08 87.64 25 5.25 No 19 0.1 No 25 0.74 Yes -24 0.62 No 46 64.67 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 100480385 + NM_015908 SRRT 1 2 3.49 69 3.88 73.1 106 10.78 Yes 18 1.42 Yes 30 0.93 Yes -30 0.92 Yes 40 95.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 100480391 + NM_015908 SRRT 1 0.14 0.22 13 -11.21 0 12 3.87 No 24 1.4 Yes 0 0 No -36 0.86 Yes 34 90.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100482836 + NM_015908 SRRT 1 81.21 137.29 72 1.45 74.67 46 7.07 Yes 33 0.4 No 29 0.71 Yes -32 0.32 No 25 47.05 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 100483902 + NM_015908 SRRT 1 0.06 0.19 12 5.59 76.52 18 4.78 No 41 1.36 Yes 0 0 No -17 0.38 No 48 56.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 100485638 + NM_015908 SRRT 1 0.07 0.13 7 10.15 75.37 35 6.59 Yes 69 0.37 No 19 0.35 Yes -34 0.55 No 36 74.93 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 100485674 + NM_015908 SRRT 1 33.7 62.47 72 9.3 89.74 35 6.51 Yes 22 1.13 Yes 22 0.71 Yes -30 0.66 Yes 40 81.17 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 100485898 + NM_015908 SRRT 1 1 2.57 61 7.85 82.9 26 5.48 No 22 0.44 No 25 0.87 Yes -25 0.64 No 45 74.03 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 100486044 + NM_015908 SRRT 1 0.06 0.14 8 7.63 82.59 22 4.23 No 74 -3.33 No 0 0 No -20 0.49 No 49 51.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56082403 - NM_006924 SRSF1 1 0.33 4.43 67 9.82 82.99 35 5.4 No 22 0.89 Yes 34 0.9 Yes -34 0.79 Yes 36 78.86 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 56082979 - NM_006924 SRSF1 1 0.12 1.49 50 -0.24 65.09 26 4.9 No 37 -2.92 No 26 0.68 Yes -18 0.39 No 52 34.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 70673583 + NM_001190987 SRSF11 1 3.7 0.82 39 7.82 86.87 21 5.66 Yes 8 1.32 Yes 0 0 No -20 0.88 Yes 50 93.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 70680606 + NM_001190987 SRSF11 1 1.41 0.32 17 3.01 0 32 6.16 Yes 19 0.25 No 0 0 No -36 0.44 No 34 73.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 70687294 + NM_001190987 SRSF11 1 49.76 11.43 72 3.77 70.16 31 9.57 Yes 18 1.52 Yes 30 0.92 Yes -30 0.98 Yes 40 97.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 70688240 + NM_001190987 SRSF11 1 0.07 0.21 12 0.34 74.55 33 6.56 Yes 20 1.3 Yes 0 0 No -32 0.89 Yes 38 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 70688448 + NM_001190987 SRSF11 1 0.08 0.28 16 4.86 72.02 34 6.22 Yes 74 -3.42 No 25 0.75 Yes -33 0.71 Yes 37 64.3 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 70694892 + NM_001190987 SRSF11 1 0.49 1.29 45 6.79 78.14 43 6.99 Yes 34 0.6 No 0 0 No -46 0.73 Yes 28 60.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 70696239 + NM_001190987 SRSF11 1 0.2 0.51 26 3.69 72.83 55 8.66 Yes 42 1.69 Yes 20 0.37 Yes -54 0.87 Yes 16 93.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 70696777 + NM_001190987 SRSF11 1 1.16 3.39 62 10.15 86.04 37 6.38 Yes 35 0.88 Yes 36 0.79 Yes -37 0.6 No 34 87.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 70697541 + NM_001190987 SRSF11 1 2.54 6.93 72 9.02 77.36 59 8.87 Yes 39 1.47 Yes 27 0.73 Yes -21 0.28 No 23 44.51 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 70703082 + NM_001190987 SRSF11 1 0.05 0.17 10 8.4 75.75 45 5.25 No 24 -3.27 No 27 0.73 Yes -36 0.71 Yes 34 86.21 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 70712502 + NM_001190987 SRSF11 1 0.04 0.13 8 -3.18 79.89 33 6.72 Yes 20 1.05 Yes 0 0 No -32 0.69 Yes 38 60 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 70712799 + NM_001190987 SRSF11 1 1.4 4.15 67 5 76.31 43 6.69 Yes 30 1 Yes 33 0.74 Yes -42 0.35 No 37 76.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 70715613 + NM_001190987 SRSF11 1 2.86 8.85 72 3.55 66.23 22 5.57 Yes 31 0.83 Yes 21 0.67 Yes -26 0.46 No 44 61.93 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 70715636 + NM_001190987 SRSF11 1 0.05 0.13 7 -11.92 75.74 32 5.61 Yes 54 0.81 Yes 0 0 No -31 0.43 No 39 52.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 70716262 + NM_001190987 SRSF11 1 0.14 0.19 11 -0.96 71.95 18 5.11 No 48 0.51 No 25 0.8 Yes -24 0.51 No 44 37.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 70716290 + NM_001190987 SRSF11 1 190.04 243.24 72 0.59 71.39 26 5.96 Yes 76 0.51 No 25 0.8 Yes -25 0.76 Yes 45 87.69 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 74731272 - NM_001195427 SRSF2 1 0.02 0.21 9 3.91 71.88 25 6.21 Yes 34 -3.32 No 23 0.9 Yes -24 0.67 Yes 46 63.52 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 74731886 - NM_001195427 SRSF2 1 0.14 1.38 51 6.37 83.02 19 5.36 No -3 0.59 No 0 0 No -22 0.88 Yes 48 83.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 74731958 - NM_001195427 SRSF2 1 3.76 35.75 72 8.71 74.97 50 7.34 Yes 37 1.06 Yes 26 0.9 Yes -26 0.58 No 24 33.5 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 36566205 + NR_036610 SRSF3 1 0.01 0.15 9 8.1 88.21 28 5.19 No 74 -3.27 No 0 0 No -27 0.61 No 46 50.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 36567642 + NR_036610 SRSF3 1 0.55 0.29 17 1.84 63.29 42 6.87 Yes 11 1.53 Yes 0 0 No -23 0.89 Yes 32 59.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 36567888 + NR_036610 SRSF3 1 0.35 0.21 12 2.86 66.92 39 5.52 No 26 0.78 Yes 0 0 No -26 0.9 Yes 44 87.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36569496 + NR_036610 SRSF3 1 0.01 0.11 7 4.72 0 15 4.58 No 20 1.8 Yes 0 0 No -42 0.75 Yes 28 80.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36569747 + NR_036610 SRSF3 1 0.02 0.21 12 4.02 0 12 4.24 No 31 1.66 Yes 0 0 No -43 0.82 Yes 27 89.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 29475757 - NM_005626 SRSF4 1 0.16 0.13 7 1.98 65.43 23 4.63 No 56 1.03 Yes 24 0.71 Yes -57 0.4 No 53 28.32 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 29486571 - NM_005626 SRSF4 1 0.63 1.04 47 3.18 72.92 29 5.52 No 76 1.31 Yes 28 0.9 Yes -28 0.82 Yes 42 80.34 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 29495151 - NM_005626 SRSF4 1 5.38 4.69 72 8.73 80.78 27 6.24 Yes 14 1.29 Yes 20 0.53 Yes -26 0.56 No 44 71.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 29498235 - NM_005626 SRSF4 1 0.11 0.11 7 9.34 98.39 22 5.29 No 61 -3.47 No 0 0 No -21 0.68 Yes 49 80.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 70235329 + NM_001039465 SRSF5 1 0.05 0.32 17 -4.01 0 19 4.24 No 12 0.63 No 23 0.9 Yes -32 0.72 Yes 38 81.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 70235839 + NM_001039465 SRSF5 1 0.03 0.24 12 6.68 73.29 22 6.22 Yes 9 0.75 No 21 0.88 Yes -21 0.61 No 49 58.59 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 70235899 + NM_001039465 SRSF5 1 0.03 0.22 15 -13.18 0 23 6.12 Yes 69 0.76 No 0 0 No -28 0.53 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 70236227 + NM_001039465 SRSF5 1 1.11 5.26 72 4.36 87.15 29 5.56 Yes 5 0.79 Yes 28 0.8 Yes -28 0.91 Yes 42 91.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 70236738 + NM_001039465 SRSF5 1 0.05 0.24 15 1.4 68.31 21 5.57 Yes 8 0.88 Yes 0 0 No -20 0.67 Yes 50 58.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 70237913 + NM_001039465 SRSF5 1 5.14 21.79 72 7 84.61 25 5.96 Yes 12 1.3 Yes 31 0.87 Yes -34 0.56 No 46 54.99 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 42088001 + NR_034009 SRSF6 1 3.89 0.26 15 4.31 70.1 27 4.54 No 69 0.55 No 0 0 No -24 0.51 No 59 59.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 42089348 + NR_034009 SRSF6 1 0.1 0.56 25 5.15 0 9 3.87 No 64 0.31 No 0 0 No -31 0.9 Yes 39 78.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 42091983 + NR_034009 SRSF6 1 0.27 1.56 51 6.18 73.22 26 5.83 Yes 17 0.84 Yes 0 0 No -25 0.64 No 41 70.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 38973322 - NM_001195446 SRSF7 1 925.14 882.35 72 6.22 83.06 25 5.38 No 0 1.19 Yes 24 0.91 Yes -25 0.74 Yes 46 65.51 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 38973342 - NM_001195446 SRSF7 1 1.07 1.08 29 6.44 84.2 20 5.1 No 64 -4.66 No 24 0.91 Yes -16 0.56 No 52 63.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 38973878 - NM_001195446 SRSF7 1 0.08 0.61 34 -2.99 0 15 4.37 No 36 1.02 Yes 0 0 No -40 0.52 No 31 64.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 38974273 - NM_001195446 SRSF7 1 0.06 0.5 26 6.06 74.34 36 4.89 No 0 0.41 No 30 0.78 Yes -30 0.72 Yes 40 79.19 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 38975252 - NM_001195446 SRSF7 1 0.07 0.36 18 8.98 80.4 22 4.9 No 38 -2.11 No 0 0 No -21 0.6 No 43 52.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 38976316 - NM_001195446 SRSF7 1 0.02 0.17 10 6.74 86.4 17 5.38 No 4 1.05 Yes 26 0.83 Yes -26 0.73 Yes 44 79.65 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 38976489 - NM_001195446 SRSF7 1 4.35 26.99 72 6.52 80.92 65 7.11 Yes 70 0.11 No 27 0.8 Yes -27 0.31 No 43 39.46 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 94801589 + NR_103726 SRSF8 1 1.36 0.58 28 7.68 81.34 30 4.82 No 17 1.14 Yes 0 0 No -29 0.77 Yes 41 81.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120901911 - NM_003769 SRSF9 1 0.56 5.18 70 3.01 89.19 24 4.61 No 20 0.59 No 0 0 No -50 0.62 No 20 61.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 120901958 - NM_003769 SRSF9 1 0.02 0.21 12 -7.69 0 13 3.87 No 75 -5.61 No 31 0.38 Yes -24 0.39 No 58 30 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 120903308 - NM_003769 SRSF9 1 0.03 0.25 16 5.44 82.54 35 6.4 Yes 64 0.42 No 0 0 No -24 0.65 No 48 50.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 120903583 - NM_003769 SRSF9 1 0.03 0.18 12 -7.12 0 11 3.87 No 34 2.04 Yes 0 0 No -46 0.83 Yes 24 93.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 23607634 - NM_001007559 SS18 1 0.13 0.25 15 12.22 88.27 43 6.78 Yes 63 1.36 Yes 0 0 No -42 0.74 Yes 28 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 23612450 - NM_001007559 SS18 1 0.5 0.89 41 6.54 82.99 12 5.06 No 75 1.18 Yes 0 0 No -20 0.86 Yes 50 93.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 23616297 - NM_001007559 SS18 1 0.52 0.38 22 7.03 76.61 34 7.05 Yes 21 0.14 No 0 0 No -33 0.93 Yes 37 93.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 23636634 - NM_001007559 SS18 1 0.15 0.43 21 5.47 76.82 15 4.5 No 73 -5.49 No 0 0 No -23 0.83 Yes 47 69.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 23644836 - NM_001007559 SS18 1 0.11 0.29 16 7.1 79.59 43 5.88 Yes 2 1.35 Yes 24 0.74 Yes -24 0.62 No 42 50.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 23648522 - NM_001007559 SS18 1 1.33 3.58 65 7.73 97.68 21 4.8 No 20 0.7 No 20 0.93 Yes -20 0.96 Yes 50 98.02 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 23659090 - NM_001007559 SS18 1 0.2 0.39 18 7.75 84.84 24 5.48 No 34 1.13 Yes 23 0.82 Yes -23 0.85 Yes 47 67.63 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr18 23659111 - NM_001007559 SS18 1 0.1 0.21 11 10.43 82.87 26 7.05 Yes 13 1.13 Yes 26 0.86 Yes -26 0.76 Yes 45 63.38 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr18 23660388 - NM_001007559 SS18 1 0.22 0.44 26 6.53 88.86 32 6.27 Yes 4 0.86 Yes 31 0.89 Yes -31 0.74 Yes 39 85.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 23662493 - NM_001007559 SS18 1 2.56 5.24 66 11.37 90.93 28 5.49 No 35 0.87 Yes 28 0.8 Yes -28 0.78 Yes 42 87.68 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 23662970 - NM_001007559 SS18 1 0.08 0.18 12 9.24 88.54 27 5.56 Yes 14 1.02 Yes 0 0 No -26 0.73 Yes 44 81.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 23664140 - NM_001007559 SS18 1 1.81 3.78 68 9.6 92.55 40 5.73 Yes 20 1.23 Yes 32 0.87 Yes -32 0.58 No 38 70.34 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr18 23666004 - NM_001007559 SS18 1 0.07 0.13 9 11.15 95.65 26 6 Yes 13 1.22 Yes 37 0.36 Yes -26 0.48 No 45 61.17 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 23669806 - NM_001007559 SS18 1 0.13 0.18 12 4.29 0 15 3.39 No 2 0.72 No 0 0 No -18 0.95 Yes 52 92.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 60725734 + NR_125980 SS18L1 1 5.86 0.18 11 1.34 0 53 7.68 Yes 40 0.91 Yes 0 0 No -46 0.59 No 24 75.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 60741170 + NR_125980 SS18L1 1 0.79 0.13 8 5.19 69.63 13 7.2 Yes 0 0.29 No 0 0 No -58 0.32 No 12 52.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 42635963 + NM_016305 SS18L2 1 0.1 0.21 13 8.36 78 36 6.16 Yes 64 1.4 Yes 0 0 No -22 0.78 Yes 48 67.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 170661985 + NM_001294145 SSB 1 0.03 0.15 9 -33.49 0 27 6.4 Yes 2 0.49 No 0 0 No -26 0.76 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 170663298 + NM_001294145 SSB 1 0.09 0.53 25 -0.9 0 44 6.98 Yes 38 0.23 No 0 0 No -43 0.65 No 27 70.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 170663506 + NM_001294145 SSB 1 0.04 0.22 13 7.1 73.1 31 5.09 No 46 0.22 No 0 0 No -30 0.65 No 42 73.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 170665366 + NM_001294145 SSB 1 0.03 0.13 9 -5.68 0 17 5.52 No 53 1.04 Yes 22 0.67 Yes -17 0.44 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 170667669 + NM_001294145 SSB 1 0.04 0.22 11 0.2 0 18 3.64 No 64 0.8 Yes 27 0.85 Yes -18 0.87 Yes 52 89.36 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 141441548 + NM_001256510 SSBP1 1 0.2 1.89 61 10.38 92.98 27 6.08 Yes 27 0.07 No 27 0.6 Yes -27 0.49 No 43 76.53 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 141445696 + NM_001256510 SSBP1 1 0.05 0.39 20 4.51 84.43 21 5.74 Yes 8 0.89 Yes 0 0 No -30 0.53 No 40 58.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 141446165 + NM_001256510 SSBP1 1 0.08 0.54 24 3.7 0 34 6.92 Yes 21 0.77 No 0 0 No -33 0.86 Yes 37 83.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 141448615 + NM_001256510 SSBP1 1 0.06 0.47 24 9.69 91.27 34 6.2 Yes 5 0.93 Yes 0 0 No -24 0.74 Yes 46 67.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 80717394 - NM_001256732 SSBP2 1 0.21 0.18 10 3.73 82.95 62 8.31 Yes 7 2.01 Yes 0 0 No -27 0.85 Yes 43 56.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 80760363 - NM_001256732 SSBP2 1 0.18 0.17 9 9.72 94.16 24 6.16 Yes 15 1.36 Yes 0 0 No -27 0.74 Yes 43 81.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 80846912 - NM_001256732 SSBP2 1 0.37 0.39 21 6.14 84.41 29 8.31 Yes 38 0.84 Yes 0 0 No -31 0.58 No 39 57.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 80866478 - NM_001256732 SSBP2 1 0.34 0.22 11 7.05 78.93 34 6.89 Yes -3 0.74 No 0 0 No -33 0.84 Yes 37 79.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 80908458 - NM_001256732 SSBP2 1 1.13 1.01 39 6.62 84.1 24 4.81 No 41 0.25 No 0 0 No -24 0.58 No 46 80.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 80909397 - NM_001256732 SSBP2 1 0.24 0.21 14 4.34 77.21 37 6.91 Yes 47 0.08 No 0 0 No -36 0.65 No 37 49.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 80911351 - NM_001256732 SSBP2 1 0.11 0.13 7 4.11 85.54 29 5.92 Yes 70 0.5 No 0 0 No -28 0.75 Yes 34 42.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 80918741 - NM_001256732 SSBP2 1 0.15 0.14 10 5.25 76.39 60 6.33 Yes 71 0.96 Yes 0 0 No -53 0.67 Yes 21 62.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 80948146 - NM_001256732 SSBP2 1 0.19 0.15 8 8.81 90.72 18 4.73 No 5 0.74 No 0 0 No -26 0.45 No 48 46.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 81006588 - NM_001256732 SSBP2 1 0.34 0.31 16 8.9 82.1 109 7.61 Yes 57 1.45 Yes 32 0.74 Yes -26 0.74 Yes 44 67.65 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 54694029 - NM_145716 SSBP3 1 0.19 0.18 12 -11.02 0 24 6.16 Yes 11 2.1 Yes 0 0 No -23 0.97 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 54708997 - NM_145716 SSBP3 1 0.46 0.61 31 9.16 81.17 71 8.85 Yes 58 2.25 Yes 28 0.08 Yes -59 0.59 No 11 68.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 54746949 - NM_145716 SSBP3 1 0.41 0.11 7 8.91 81.16 31 5.25 No 42 0.41 No 0 0 No -30 0.37 No 30 45.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 54804827 - NM_145716 SSBP3 1 0.29 0.35 17 12.72 95.02 42 4.42 No 63 1.49 Yes 0 0 No -34 0.7 Yes 36 84.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 54824771 - NM_145716 SSBP3 1 0.26 0.32 14 4.97 84.18 27 5.26 No 74 0.59 No 0 0 No -22 0.44 No 43 50.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 54847053 - NM_145716 SSBP3 1 0.16 0.22 8 4.74 84.41 45 7.87 Yes 32 2.42 Yes 0 0 No -44 0.88 Yes 26 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18543538 + NM_032627 SSBP4 1 0.21 0.22 15 7.99 81.27 23 5.37 No 44 1.35 Yes 0 0 No -49 0.48 No 21 62.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18543493 + NM_032627 SSBP4 1 0.69 0.68 33 4.99 78.26 12 5.17 No -1 0.97 Yes 20 0.97 Yes -24 0.84 Yes 46 68.98 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 182758337 + NR_109843 SSFA2 1 0.74 0.54 29 6.78 89.01 54 8.45 Yes 41 1.24 Yes 21 0.82 Yes -21 0.86 Yes 49 92.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 182766028 + NR_109843 SSFA2 1 0.51 0.58 28 5.1 82.9 29 6.49 Yes 16 1.38 Yes 0 0 No -28 0.93 Yes 42 96.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 182766558 + NR_109843 SSFA2 1 0.5 0.57 33 3.87 79.45 41 7.31 Yes 73 0.83 Yes 0 0 No -27 0.53 No 33 55.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 182775852 + NR_109843 SSFA2 1 1.42 1.14 45 6.7 80.87 27 6.7 Yes 14 0.15 No 0 0 No -26 0.92 Yes 44 94.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 182783493 + NR_109843 SSFA2 1 2.79 1.56 54 1.34 0 15 4.58 No 65 0.73 No 0 0 No -34 0.45 No 36 60.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 109195501 - NM_018984 SSH1 1 0.19 0.14 10 3.07 64.25 50 7.06 Yes 61 -2.38 No 0 0 No -33 0.81 Yes 37 91.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 109197476 - NM_018984 SSH1 1 0.77 0.64 31 12.44 86.63 18 5.58 Yes 59 0.87 Yes 0 0 No -22 0.66 No 48 69.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 109205277 - NM_018984 SSH1 1 1.97 1.32 44 7.01 0 19 4.58 No 6 0.74 No 0 0 No -18 0.93 Yes 52 85.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 109205624 - NM_018984 SSH1 1 3.94 2.65 61 9.79 86.43 28 5.75 Yes 15 1.05 Yes 0 0 No -27 0.69 Yes 43 67.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 109210932 - NM_018984 SSH1 1 0.23 0.13 9 2.62 0 28 5.62 Yes 75 -2.99 No 0 0 No -27 0.89 Yes 43 81.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 109212335 - NM_018984 SSH1 1 6.57 4.32 69 9.04 87.7 40 8.06 Yes 58 0.98 Yes 0 0 No -30 0.54 No 31 52.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 109248523 - NM_018984 SSH1 1 0.22 0.11 8 10.51 84.86 30 5.88 Yes 17 1.09 Yes 0 0 No -29 0.64 No 45 66.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 27964631 - NM_033389 SSH2 1 0.26 0.17 10 9.12 88.36 22 7.23 Yes 9 0.35 No 0 0 No -21 0.58 No 49 50.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 27970258 - NM_033389 SSH2 1 0.77 0.54 18 2.98 82.41 25 5.23 No 19 0.71 No 0 0 No -24 0.58 No 46 62.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 27972385 - NM_033389 SSH2 1 0.37 0.26 15 7.74 83.19 43 7.91 Yes 30 1.39 Yes 0 0 No -42 0.87 Yes 28 90.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27999160 - NM_033389 SSH2 1 0.17 0.11 7 4.74 84.36 27 5.55 No -3 0.11 No 21 0.84 Yes -24 0.53 No 52 69.85 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 28001178 - NM_033389 SSH2 1 6.92 5.32 68 4.93 82.27 59 7.16 Yes 46 1.85 Yes 29 0.62 Yes -29 0.43 No 31 39.54 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 28001557 - NM_033389 SSH2 1 0.33 0.25 16 9.19 95 23 4.9 No 64 -3.59 No 0 0 No -22 0.77 Yes 48 63.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 28004757 - NM_033389 SSH2 1 3.92 3.17 69 2.03 75.3 31 6.4 Yes 18 0.72 No 0 0 No -30 0.81 Yes 40 72.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 28017005 - NM_033389 SSH2 1 0.33 0.22 15 5.33 87.77 26 5.66 Yes 51 0.68 No 0 0 No -25 0.67 Yes 45 46.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 28085412 - NM_033389 SSH2 1 4.52 0.57 27 9.28 94.82 17 6.29 Yes 70 1.45 Yes 0 0 No -24 0.65 No 46 69.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 28090339 - NM_033389 SSH2 1 8.94 1.14 44 8.18 83.45 31 5.02 No 28 0.61 No 0 0 No -26 0.33 No 40 44.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 28120178 - NM_033389 SSH2 1 7.57 1 42 9.56 85.52 24 6.38 Yes 11 1.12 Yes 0 0 No -23 0.51 No 47 72.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140083452 + NM_003731 SSNA1 1 1.36 1.6 53 0.02 69.85 24 8 Yes 11 1.96 Yes 0 0 No -23 0.87 Yes 47 83.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 7290190 - NM_001292008 SSR1 1 0.06 0.36 18 -6.96 0 39 6.55 Yes 26 0.73 No 22 0.73 Yes -38 0.69 Yes 32 74.68 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 7290195 - NM_001292008 SSR1 1 0.02 0.11 7 2.74 76.38 34 6.28 Yes 72 1.24 Yes 22 0.73 Yes -33 0.73 Yes 37 80.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 7294757 - NM_001292008 SSR1 1 0.05 0.33 20 5.5 85.02 20 7.14 Yes 7 1.29 Yes 0 0 No -19 0.84 Yes 51 90.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 7295336 - NM_001292008 SSR1 1 0.02 0.15 10 9.15 88.14 37 8.94 Yes 24 2 Yes 36 0.87 Yes -36 0.79 Yes 34 93.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 7297443 - NM_001292008 SSR1 1 0.21 1.13 38 3.06 0 34 7.47 Yes 44 1.74 Yes 33 0.77 Yes -33 0.55 No 37 54.01 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 7299605 - NM_001292008 SSR1 1 0.07 0.38 24 7.69 75.99 19 5.65 Yes 6 0.82 Yes 0 0 No -18 0.4 No 43 48.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 7301725 - NM_001292008 SSR1 1 3.6 0.14 10 6.7 72.74 17 5.48 No 71 -3.37 No 0 0 No -26 0.8 Yes 44 75.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 7301806 - NM_001292008 SSR1 1 16982.54 793.64 72 9.98 91.89 29 8.82 Yes 16 1.53 Yes 28 0.9 Yes -28 0.87 Yes 42 91.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 7303867 - NM_001292008 SSR1 1 0.08 0.47 26 1.31 0 33 5.85 Yes 20 1.32 Yes 28 0.66 Yes -32 0.79 Yes 38 80.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 155982357 - NM_003145 SSR2 1 0.11 0.86 36 7.48 91.93 27 4.65 No 31 0.76 No 26 0.86 Yes -26 0.9 Yes 44 97.18 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 155984251 - NM_003145 SSR2 1 0.02 0.17 10 3.07 66.25 30 4.25 No 6 0.06 No 0 0 No -29 0.68 Yes 41 76.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 155984855 - NM_003145 SSR2 1 0.38 3.75 68 -11.25 0 13 3.87 No 25 0.64 No 0 0 No -37 0.76 Yes 21 52.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 155984865 - NM_003145 SSR2 1 0.15 1.51 53 -3.66 74.14 28 5.74 Yes 15 0.67 No 27 0.86 Yes -27 0.88 Yes 31 59.16 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 155990138 - NM_003145 SSR2 1 0.1 0.46 25 -0.57 0 11 4.12 No 44 -0.52 No 22 0.42 Yes -34 0.88 Yes 36 92.92 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 155990146 - NM_003145 SSR2 1 0.09 0.44 23 -4.9 75.51 14 4.82 No 75 -4.11 No 22 0.42 Yes -26 0.91 Yes 44 92.93 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 156259727 - NM_007107 SSR3 1 0.01 0.13 9 -0.69 0 27 5.42 No 60 1.56 Yes 0 0 No -23 0.54 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 156261068 - NM_007107 SSR3 1 0.1 1.11 45 -5.58 0 25 4.92 No 8 0.77 No 29 0.9 Yes -20 0.54 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 156264518 - NM_007107 SSR3 1 0.02 0.14 9 10.08 88.59 33 6.03 Yes 4 0.78 Yes 0 0 No -32 0.71 Yes 38 87.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 156266788 - NM_007107 SSR3 1 0.06 0.56 31 0.81 0 27 7.01 Yes 46 1.06 Yes 30 0.32 Yes -41 0.45 No 29 66.92 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 156269303 - NM_007107 SSR3 1 0.01 0.11 7 7.09 87.25 36 6.69 Yes 38 0.49 No 0 0 No -26 0.31 No 36 64.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 156271637 - NM_007107 SSR3 1 0.01 0.13 9 5.08 84.44 21 5.12 No 29 1.18 Yes 0 0 No -20 0.69 Yes 50 74.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 156272032 - NM_007107 SSR3 1 0.04 0.36 20 3.02 74.78 36 9.22 Yes 23 1.08 Yes 0 0 No -35 0.68 Yes 35 85.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153061117 + NM_006280 SSR4 1 1.86 18.43 72 8.22 75.31 26 5.66 Yes 13 0.51 No 25 0.88 Yes -25 0.68 Yes 45 66.76 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 153061382 + NM_006280 SSR4 1 0.02 0.17 10 10.44 95.4 27 5.57 Yes 61 0.47 No 26 0.62 Yes -24 0.44 No 46 39.97 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 153062381 + NM_006280 SSR4 1 0.01 0.13 7 6.13 83.79 16 5.14 No 3 1.54 Yes 0 0 No -27 0.6 No 43 61.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 153063181 + NM_006280 SSR4 1 0.04 0.56 30 -24.38 0 57 7.22 Yes 4 -0.28 No 0 0 No -27 0.67 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 153063531 + NM_006280 SSR4 1 0.01 0.13 8 -1.77 0 15 3.87 No 26 2.16 Yes 0 0 No -38 0.76 Yes 32 75.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 57099785 - NM_003146 SSRP1 1 0.03 0.11 8 -16.57 0 13 3.88 No 57 0.43 No 23 0.87 Yes -15 0.44 No 14 35.93 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 57099956 - NM_003146 SSRP1 1 0.09 0.57 28 -0.59 0 28 4.42 No 39 -2.22 No 0 0 No -27 0.71 Yes 43 55.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 57100123 - NM_003146 SSRP1 1 0.02 0.1 7 4.47 76.74 39 5.22 No 41 -0.76 No 0 0 No -36 0.49 No 42 54.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 57100183 - NM_003146 SSRP1 1 0.06 0.22 13 -2.08 59.15 42 8.62 Yes 29 0.44 No 0 0 No -41 0.44 No 29 65.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 57100288 - NM_003146 SSRP1 1 0.17 0.61 32 -0.65 73.63 20 4.83 No 7 -1.66 No 0 0 No -19 0.52 No 51 39.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 57100546 - NM_003146 SSRP1 1 0.03 0.17 10 2.28 0 13 4.36 No 70 0.79 Yes 0 0 No -51 0.48 No 48 31.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 57100619 - NM_003146 SSRP1 1 0.06 0.35 19 2.65 0 22 5.29 No -3 0.35 No 0 0 No -24 0.64 No 46 64.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 57100669 - NM_003146 SSRP1 1 0.16 1 38 3.08 86.59 28 5.83 Yes 43 1.91 Yes 0 0 No -27 0.91 Yes 43 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 57102635 - NM_003146 SSRP1 1 0.34 0.57 30 8.19 87.27 21 5.66 Yes 53 0.58 No 0 0 No -20 0.75 Yes 50 75.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 57102722 - NM_003146 SSRP1 1 0.91 1.42 51 2.22 0 17 5.78 Yes 10 0.95 Yes 23 0.92 Yes -22 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 71167666 + NM_001050 SSTR2 1 15.7 3.99 64 9.4 99.45 21 5.61 Yes 29 0.39 No 0 0 No -28 0.34 No 47 46.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 1479355 - NM_014188 SSU72 1 0.04 0.15 11 1.89 75.7 16 3.65 No 28 2.16 Yes 0 0 No -40 0.53 No 30 92.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 85121272 - NM_001166417 SSX2IP 1 0.73 0.17 9 6.63 85.69 15 4 No 9 0.29 No 22 0.83 Yes -22 0.72 Yes 48 80.56 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 85121686 - NM_001166417 SSX2IP 1 27.18 8.75 70 1.88 75.99 26 6.3 Yes 74 1.37 Yes 0 0 No -25 0.9 Yes 45 91.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 85135540 - NM_001166417 SSX2IP 1 0.84 0.14 9 4.5 74.98 32 6.78 Yes 19 1.14 Yes 0 0 No -31 0.89 Yes 39 88.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41223257 - NM_001278589 ST13 1 0.03 0.17 10 -4.94 0 18 4.24 No 44 0.57 No 28 0.57 Yes -56 0.69 Yes 14 32.62 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 41225676 - NM_001278589 ST13 1 0.02 0.1 7 -9.64 68.26 27 5.8 Yes 34 0.32 No 0 0 No -29 0.37 No 24 49.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 41226955 - NM_001278589 ST13 1 0.01 0.14 8 -1.36 0 9 3.87 No 46 1.1 Yes 0 0 No -31 0.91 Yes 39 92.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41228221 - NM_001278589 ST13 1 0.05 0.49 24 8.75 86.21 22 5.91 Yes 9 1.5 Yes 21 0.86 Yes -21 0.62 No 49 62.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 41231656 - NM_001278589 ST13 1 0.01 0.1 7 5.28 78.81 29 5.29 No 24 1.21 Yes 0 0 No -28 0.64 No 42 88.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 41231891 - NM_001278589 ST13 1 0.01 0.1 7 -1.95 0 20 7.42 Yes 7 1.35 Yes 0 0 No -33 0.57 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41235759 - NM_001278589 ST13 1 0.01 0.11 7 0.91 0 26 5.14 No 61 0.94 Yes 0 0 No -36 0.72 Yes 34 77.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41240944 - NM_001278589 ST13 1 0.03 0.22 13 6.03 80.62 20 5.74 Yes 26 -3.82 No 25 0.91 Yes -34 0.48 No 54 36.5 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 41244049 - NM_001278589 ST13 1 0.22 1.64 53 4.63 82.65 46 8.56 Yes 24 1.06 Yes 0 0 No -33 0.55 No 34 77.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 70434998 - NM_006927 ST3GAL2 1 36.48 12.11 72 7.95 87.77 16 5.58 Yes 3 1.12 Yes 18 0.59 Yes -18 0.85 Yes 52 91.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 70438424 - NM_006927 ST3GAL2 1 3.08 1.04 46 7.4 85.32 33 8.2 Yes 20 1.78 Yes 0 0 No -32 0.93 Yes 38 95.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70446783 - NM_006927 ST3GAL2 1 4.22 1.36 47 8.12 87.74 23 6.94 Yes 73 0.71 No 0 0 No -23 0.66 Yes 47 67.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 44366420 + NR_073019 ST3GAL3 1 6.33 0.78 36 5.82 82.31 26 5.65 Yes -3 0.37 No 25 0.92 Yes -25 0.93 Yes 45 94.17 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 44387114 + NR_073019 ST3GAL3 1 1.29 0.17 9 7.6 77.44 34 5.99 Yes 21 0.32 No 0 0 No -33 0.7 Yes 37 73.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 44395690 + NR_073019 ST3GAL3 1 1.06 0.13 8 8.26 89.31 22 4.68 No 9 0.39 No 21 0.83 Yes -21 0.89 Yes 49 83.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 126283481 + NM_001254759 ST3GAL4 1 0.57 0.11 8 5.21 82.84 56 9.05 Yes 43 0.73 No 0 0 No -22 0.46 No 37 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 86074686 - NM_003896 ST3GAL5 1 6.46 1.26 48 8.81 83.1 22 5.95 Yes 75 1.2 Yes 22 0.62 Yes -31 0.48 No 39 85.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 86075208 - NM_003896 ST3GAL5 1 1.44 0.15 10 6.62 88.14 17 5.83 Yes 4 1.05 Yes 0 0 No -27 0.86 Yes 43 87.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86075505 - NM_003896 ST3GAL5 1 2.68 0.32 21 7.2 88.83 44 7.45 Yes 36 0.29 No 26 0.73 Yes -26 0.79 Yes 44 74.1 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 86080124 - NM_003896 ST3GAL5 1 7.38 0.78 37 8.61 80.35 37 4.81 No 24 1.28 Yes 0 0 No -36 0.75 Yes 34 75.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 86080182 - NM_003896 ST3GAL5 1 2.26 0.18 12 1.73 72.14 37 6.48 Yes 54 0.66 No 0 0 No -36 0.7 Yes 34 69.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 86080215 - NM_003896 ST3GAL5 1 2.79 0.28 16 -11.69 0 11 3.87 No 21 0.67 No 27 0.61 Yes -33 0.8 Yes 37 81.67 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 86080223 - NM_003896 ST3GAL5 1 2.95 0.42 21 -4.28 75.5 26 6.4 Yes 13 0.69 No 23 0.71 Yes -25 0.85 Yes 45 80.28 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 86097382 - NM_003896 ST3GAL5 1 8.68 0.69 38 11.45 85.26 22 6.51 Yes 29 0.1 No 21 0.34 Yes -30 0.68 Yes 40 81.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 98492264 + NM_001323368 ST3GAL6 1 2.37 0.15 9 2.61 66.94 36 6.62 Yes 23 1.08 Yes 35 0.76 Yes -35 0.83 Yes 35 90.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 186741373 + NM_003032 ST6GAL1 1 0.11 0.31 16 7.38 82.07 22 4.54 No 1 0.81 Yes 0 0 No -21 0.61 No 49 62.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 186751303 + NM_003032 ST6GAL1 1 0.05 0.15 10 7.53 83.13 14 4.98 No 9 1.08 Yes 0 0 No -28 0.68 Yes 42 70.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 186756179 + NM_003032 ST6GAL1 1 0.74 2.07 63 7.83 85.22 21 7.98 Yes 8 1.33 Yes 20 0.72 Yes -20 0.84 Yes 50 89.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 186756182 + NM_003032 ST6GAL1 1 0.28 0.75 35 4.52 79.93 24 8.16 Yes 11 1.3 Yes 20 0.72 Yes -23 0.9 Yes 47 91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 186759704 + NM_003032 ST6GAL1 1 0.16 0.9 40 8.07 76.69 27 5 No 14 0.69 No 27 0.82 Yes -27 0.75 Yes 43 88.72 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 186761637 + NM_003032 ST6GAL1 1 0.03 0.14 7 7.24 80.87 26 6.31 Yes 13 0.99 Yes 0 0 No -25 0.91 Yes 45 79.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 186782307 + NM_003032 ST6GAL1 1 1.16 5.38 69 8.39 76.54 31 5.74 Yes 18 0.85 Yes 30 0.71 Yes -30 0.8 Yes 40 76.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 186790615 + NM_003032 ST6GAL1 1 0.05 0.19 12 -3.97 0 10 3.87 No 29 -2.61 No 18 0.48 Yes -36 0.68 Yes 34 73.74 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 186790862 + NM_003032 ST6GAL1 1 0.05 0.25 13 1.17 0 9 3.87 No 55 0.44 No 0 0 No -23 0.54 No 47 62.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 186791192 + NM_003032 ST6GAL1 1 0.07 0.44 23 9.59 88.1 10 5.57 Yes 27 -2.26 No 25 0.79 Yes -29 0.47 No 45 65.16 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 186791955 + NM_003032 ST6GAL1 1 0.03 0.14 9 -1.47 0 12 4.24 No 42 1.16 Yes 0 0 No -34 0.41 No 36 71.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 186792033 + NM_003032 ST6GAL1 1 0.05 0.25 15 1.53 76.77 24 3.65 No 8 0.39 No 0 0 No -20 0.57 No 50 53.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 186795525 + NM_003032 ST6GAL1 1 0.04 0.14 9 5.34 77.79 26 5.54 No 13 0.76 No 0 0 No -25 0.8 Yes 45 82.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130670881 - NM_175039 ST6GALNAC4 1 0.42 0.65 31 6.88 80.9 23 5.39 No 70 -3.5 No 27 0.7 Yes -22 0.72 Yes 48 66.95 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr9 130672366 - NM_175039 ST6GALNAC4 1 0.92 0.74 34 5.02 84.18 24 4.66 No 64 -3.75 No 32 0.9 Yes -22 0.74 Yes 47 57.6 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr9 130672808 - NM_175039 ST6GALNAC4 1 11.67 9.29 72 6.34 84.89 48 7.2 Yes 35 1.57 Yes 28 0.68 Yes -29 0.63 No 41 58.93 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 130674618 - NM_175039 ST6GALNAC4 1 2.06 2 52 5.28 80.62 25 5.29 No 12 -0.44 No 0 0 No -24 0.95 Yes 46 94.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130678528 - NM_175039 ST6GALNAC4 1 1.04 1.01 44 8.12 88.07 24 5.03 No 50 2.14 Yes 0 0 No -23 0.93 Yes 47 88.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130656111 - NR_104629 ST6GALNAC6 1 1.16 0.68 28 10.14 96.74 22 7.17 Yes 9 2.55 Yes 0 0 No -25 0.82 Yes 45 85.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 130656717 - NR_104629 ST6GALNAC6 1 0.22 0.14 8 9.27 85.53 31 6.56 Yes 18 0.73 No 0 0 No -30 0.77 Yes 40 84.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130656909 - NR_104629 ST6GALNAC6 1 6.72 2.97 67 9.29 84.66 39 6.75 Yes 67 2.45 Yes 23 0.9 Yes -23 0.91 Yes 47 90.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 130660290 - NR_104629 ST6GALNAC6 1 9.42 1.53 51 10.07 85.42 29 5.62 Yes 16 0.58 No 26 0.89 Yes -28 0.7 Yes 42 75.49 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 113112573 - NM_138729 ST7L 1 2.32 0.18 10 3.36 0 37 6.4 Yes 24 0.47 No 0 0 No -36 0.9 Yes 34 96.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 113115069 - NM_138729 ST7L 1 6.76 0.43 19 -5.6 0 18 4.24 No 43 0.48 No 0 0 No -55 0.8 Yes 15 90.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 113117856 - NM_138729 ST7L 1 8.24 0.51 23 7.19 86.59 20 4.24 No 7 1.02 Yes 0 0 No -28 0.57 No 50 61.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 113121999 - NM_138729 ST7L 1 4.95 0.63 35 11.19 95.65 29 6.01 Yes 43 1.18 Yes 0 0 No -28 0.84 Yes 42 83.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 113145670 - NM_138729 ST7L 1 1.79 0.26 15 9.77 92.78 24 4.98 No 11 0.38 No 0 0 No -23 0.71 Yes 47 78.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 113150220 - NM_138729 ST7L 1 21.26 2.75 64 9.12 85.51 34 10.51 Yes 21 1.85 Yes 33 0.72 Yes -28 0.69 Yes 42 69.42 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 113156646 - NM_138729 ST7L 1 3.61 0.75 32 6.03 91.15 30 7.48 Yes 70 0.77 No 0 0 No -29 0.79 Yes 41 80.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 113159467 - NM_138729 ST7L 1 9.21 1.35 48 6.29 84.56 50 7.07 Yes 37 1.27 Yes 28 0.83 Yes -28 0.86 Yes 42 71.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 113160992 - NM_138729 ST7L 1 3.05 0.39 23 9 87.44 23 5.2 No 10 0.65 No 22 0.91 Yes -22 0.74 Yes 48 89.02 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 100199628 - NM_005668 ST8SIA4 1 0.31 0.35 17 9.94 88.65 29 4.62 No 16 1.32 Yes 0 0 No -24 0.63 No 46 64.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 100211392 - NM_005668 ST8SIA4 1 0.08 0.1 7 0.09 64.35 42 8.42 Yes 29 1.39 Yes 0 0 No -41 0.58 No 29 89.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 100231488 - NM_005668 ST8SIA4 1 0.96 0.85 40 -0.78 80.65 32 5.82 Yes 67 -2.33 No 0 0 No -31 0.58 No 39 60.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 100231513 - NM_005668 ST8SIA4 1 0.2 0.21 12 4.88 74.47 58 5.92 Yes 61 0.55 No 29 0.77 Yes -30 0.46 No 40 60.69 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 100236168 - NM_005668 ST8SIA4 1 0.66 0.6 31 6.2 69.86 37 5.46 No 24 1.38 Yes 26 0.88 Yes -26 0.92 Yes 44 94.65 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 100237805 - NM_005668 ST8SIA4 1 0.14 0.13 9 7.96 77.27 54 5.47 No 32 0.62 No 0 0 No -38 0.45 No 32 71.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 136106690 - NM_005862 STAG1 1 0.27 0.19 12 8.57 91.87 28 4.19 No 26 2.4 Yes 0 0 No -27 0.93 Yes 43 92.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136106715 - NM_005862 STAG1 1 0.33 0.26 15 8.58 76.53 43 6.68 Yes 1 2.22 Yes 0 0 No -42 0.73 Yes 28 87.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136112342 - NM_005862 STAG1 1 0.09 0.1 7 1.78 0 21 6.55 Yes 44 1.24 Yes 0 0 No -41 0.54 No 27 76.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 136115666 - NM_005862 STAG1 1 0.13 0.11 7 6.31 72.17 30 5.36 No 31 1.35 Yes 0 0 No -29 0.54 No 41 75.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 136133752 - NM_005862 STAG1 1 0.51 0.53 26 11.96 92.23 33 5.39 No 5 1.8 Yes 0 0 No -32 0.94 Yes 38 90.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136136770 - NM_005862 STAG1 1 0.21 0.18 11 5.78 76.39 33 5.94 Yes 20 0.19 No 0 0 No -32 0.96 Yes 38 97.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 136191365 - NM_005862 STAG1 1 0.53 0.33 17 6.4 82.35 16 5.2 No 63 1.11 Yes 18 0.43 Yes -20 0.56 No 50 65.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 136213469 - NM_005862 STAG1 1 0.29 0.33 19 8.7 86.6 31 5.74 Yes 45 0.55 No 0 0 No -30 0.79 Yes 40 87.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 136218911 - NM_005862 STAG1 1 0.48 0.54 28 2.09 67.97 16 5.22 No 53 0.91 Yes 0 0 No -21 0.33 No 15 24.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 136218930 - NM_005862 STAG1 1 0.18 0.19 9 3.03 77.96 47 7.91 Yes 34 0.92 Yes 0 0 No -46 0.64 No 24 78.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 136237258 - NM_005862 STAG1 1 2.7 2.46 61 9.76 95.19 23 4.83 No 67 1.33 Yes 29 0.6 Yes -29 0.58 No 41 48.85 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 136239478 - NM_005862 STAG1 1 0.19 0.15 11 11.49 84.88 33 5.64 Yes 20 1.35 Yes 0 0 No -32 0.75 Yes 38 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136305769 - NM_005862 STAG1 1 1.05 0.53 28 9.76 80.01 35 6.4 Yes 22 1.39 Yes 34 0.67 Yes -34 0.82 Yes 36 87.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 136310392 - NM_005862 STAG1 1 7.36 3.76 68 8.38 85.65 31 4.68 No 23 0.77 Yes 30 0.81 Yes -31 0.55 No 40 70.32 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 136321217 - NM_005862 STAG1 1 0.42 0.22 12 4.71 84.41 47 7.28 Yes 44 0.69 No 0 0 No -51 0.46 No 24 67.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 136322722 - NM_005862 STAG1 1 0.81 0.4 18 2.84 0 39 7.9 Yes 26 1.92 Yes 0 0 No -38 0.73 Yes 32 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136370040 - NM_005862 STAG1 1 0.2 0.19 10 6.9 86.87 21 6 Yes 75 0.52 No 0 0 No -29 0.69 Yes 41 85.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 136390715 - NM_005862 STAG1 1 0.32 0.24 14 10.51 89.4 49 7.23 Yes 36 1.64 Yes 0 0 No -37 0.88 Yes 33 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136428409 - NM_005862 STAG1 1 0.62 0.42 21 8.81 87.44 21 5.66 Yes 8 1.17 Yes 0 0 No -20 0.68 Yes 50 60.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 136432398 - NM_005862 STAG1 1 0.21 0.15 9 6.79 90.14 27 5.2 No 51 0.48 No 0 0 No -26 0.72 Yes 44 66.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 136432422 - NM_005862 STAG1 1 0.5 0.42 25 5.19 88.76 27 5.57 Yes 75 0.74 No 0 0 No -30 0.61 No 44 78.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 136439016 - NM_005862 STAG1 1 0.34 0.26 17 3.97 84.41 31 5.04 No 25 1.02 Yes 0 0 No -30 0.73 Yes 40 84.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 136455918 - NM_005862 STAG1 1 0.38 0.31 17 6.44 85.89 27 6.23 Yes 14 2.4 Yes 0 0 No -26 0.87 Yes 44 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 123095928 + NM_001042750 STAG2 1 5.8 0.32 19 7.57 84.11 34 6.89 Yes 21 0.3 No 33 0.85 Yes -33 0.66 No 37 74.75 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chrX 123160414 + NM_001042750 STAG2 1 0.92 2.14 59 5.57 92.7 20 5.56 Yes 74 0.9 Yes 27 0.75 Yes -27 0.56 No 43 50.86 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 123161591 + NM_001042750 STAG2 1 0.09 0.19 14 6.84 86.11 23 5.39 No 39 -2.92 No 0 0 No -25 0.58 No 45 60.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 123162317 + NM_001042750 STAG2 1 0.04 0.1 7 6.68 87.15 26 5.64 Yes 4 0.16 No 0 0 No -31 0.5 No 39 51.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 123173525 + NM_001042750 STAG2 1 0.11 0.19 11 7.49 87.82 20 5.51 No 37 0.89 Yes 0 0 No -19 0.69 Yes 18 67.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 123195629 + NM_001042750 STAG2 1 0.05 0.13 7 1.9 0 12 4.24 No 36 2.53 Yes 0 0 No -38 0.72 Yes 32 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 123202416 + NM_001042750 STAG2 1 0.25 0.57 29 -11.81 80.53 22 5.58 Yes 39 0.95 Yes 0 0 No -21 0.41 No 42 59.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 123220378 + NM_001042750 STAG2 1 0.05 0.11 7 -3.71 0 12 3.96 No 18 0.58 No 22 0.95 Yes -30 0.59 No 40 62.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 99811641 + NM_001282716 STAG3 1 0.46 1.46 47 2.44 0 20 4.49 No 73 0.73 No 0 0 No -19 0.96 Yes 51 87.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 74301261 - NR_040584 STAG3L2 1 1.98 0.96 47 10.24 81.45 17 4.4 No 15 0.46 No 27 0.81 Yes -27 0.78 Yes 43 82.65 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 66768968 + NR_040585 STAG3L4 1 6.87 0.67 32 10.86 93.71 31 7.06 Yes 39 0.95 Yes 0 0 No -30 0.88 Yes 40 90.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99944827 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 1.42 0.14 8 1.08 0 28 5.95 Yes 15 0.08 No 0 0 No -33 0.73 Yes 37 84.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99947339 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 234.24 25.19 72 3.42 76.21 19 4.65 No 6 0.08 No 0 0 No -19 0.76 Yes 51 52.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 99947353 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 135.27 15.14 72 8.91 83.56 17 4.8 No 4 0.86 Yes 0 0 No -16 0.52 No 54 80.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 99947455 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 1.95 0.21 14 -0.65 0 20 4.29 No 7 0.65 No 0 0 No -19 0.86 Yes 51 81.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99948880 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 3.36 1.67 60 1.32 0 16 2.09 No NA NA NA 0 0 No -57 0.34 No 34 16.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99949847 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 1.68 0.17 10 -5.92 0 41 7.09 Yes 28 1.67 Yes 25 0.96 Yes -40 0.93 Yes 30 93.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 99949884 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 29.92 2.72 64 4.15 72.87 26 4.21 No 65 1.64 Yes 25 0.96 Yes -25 0.86 Yes 45 82.3 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 99952186 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 2.53 1.25 51 8.85 93.23 29 8.43 Yes 16 1.97 Yes 0 0 No -28 0.92 Yes 42 94.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99960873 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 0.48 0.24 12 9.4 94.03 15 5.48 No 2 0.64 No 0 0 No -20 0.6 No 47 50.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99964624 + NR_036569 STAG3L5P-PVRIG2P-PILRB 1 0.42 0.21 14 4.25 77.93 25 6 Yes 12 1.36 Yes 0 0 No -24 0.88 Yes 46 89.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 17732090 + NM_001324284 STAM 1 0.83 0.79 36 7.89 88.18 24 4.3 No 6 1.38 Yes 0 0 No -23 0.72 Yes 47 83.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 17742180 + NM_001324284 STAM 1 0.37 0.32 18 -5.92 0 11 3.49 No 44 -4.61 No 29 0.47 Yes -20 0.78 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 17751400 + NM_001324284 STAM 1 0.53 0.28 17 6.09 69.97 42 6.52 Yes 42 1.19 Yes 0 0 No -25 0.46 No 45 71.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 17755267 + NM_001324284 STAM 1 0.75 0.39 24 11.17 90.21 20 5.98 Yes 73 1.39 Yes 0 0 No -23 0.81 Yes 47 91.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 152978931 - NM_005843 STAM2 1 0.24 0.28 17 6.25 84.08 34 5.56 Yes 65 1.28 Yes 0 0 No -31 0.68 Yes 39 85.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74074516 + NM_213622 STAMBP 1 0.13 0.15 11 0.66 77.59 22 5.68 Yes 9 0.99 Yes 0 0 No -27 0.7 Yes 44 73.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74080161 + NM_213622 STAMBP 1 0.75 1.13 42 5.72 78.6 25 7.14 Yes 12 0.34 No 0 0 No -24 0.89 Yes 46 88.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74082748 + NM_213622 STAMBP 1 0.12 0.19 12 4.8 89.21 21 5.09 No 8 0.42 No 0 0 No -26 0.61 No 50 64.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 74083312 + NM_213622 STAMBP 1 0.1 0.15 10 10.37 83.08 33 5.64 Yes 25 0.52 No 0 0 No -25 0.79 Yes 48 72.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74087660 + NM_213622 STAMBP 1 2.04 3.25 65 4.78 76.34 39 6.2 Yes 26 0.63 No 32 0.79 Yes -38 0.72 Yes 32 63.98 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 90641771 + NM_020799 STAMBPL1 1 0.24 0.15 10 5.54 93.39 17 7.99 Yes 4 1.36 Yes 0 0 No -24 0.47 No 46 55.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 90642218 + NM_020799 STAMBPL1 1 0.78 0.51 25 11.62 88.38 29 6.63 Yes 57 0.87 Yes 28 0.91 Yes -28 0.83 Yes 42 90.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 90653627 + NM_020799 STAMBPL1 1 1 0.51 27 5.99 81.27 23 5.74 Yes 35 1.05 Yes 28 0.47 Yes -28 0.49 No 42 71.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 90663844 + NM_020799 STAMBPL1 1 0.16 0.19 9 7.72 80.16 31 5.28 No 7 1.46 Yes 0 0 No -19 0.76 Yes 51 77.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 90666804 + NM_020799 STAMBPL1 1 0.1 0.13 7 0.92 62.99 65 9.06 Yes 52 1.63 Yes 0 0 No -32 0.66 No 27 47.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 90676478 + NM_020799 STAMBPL1 1 0.14 0.14 7 0.09 66.95 36 6.32 Yes 20 0.24 No 0 0 No -27 0.34 No 43 59.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 68428688 + NM_012108 STAP1 1 0.07 0.13 7 -3.57 74.21 63 5.95 Yes 50 0.9 Yes 0 0 No -33 0.48 No 37 60.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 68442555 + NM_012108 STAP1 1 0.16 0.21 14 -2.68 0 12 4.24 No 35 1.85 Yes 0 0 No -21 0.67 Yes 49 70.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68454049 + NM_012108 STAP1 1 2.37 4.46 70 10.08 87.75 26 6.71 Yes 13 1.98 Yes 0 0 No -25 0.92 Yes 45 94.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68457857 + NM_012108 STAP1 1 0.54 0.99 41 9.5 87.82 15 4.72 No 52 0.99 Yes 0 0 No -31 0.73 Yes 39 78.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68461498 + NM_012108 STAP1 1 0.13 0.17 10 8.84 73.38 15 5.96 Yes -4 0.15 No 0 0 No -30 0.5 No 40 62.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 72466116 - NM_006645 STARD10 1 0.53 0.29 17 3.02 73.09 9 5.2 No -4 0.53 No 23 0.56 Yes -23 0.35 No 40 28.67 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 33679846 - NM_001243476 STARD13 1 0.27 0.13 8 -5.69 78.65 19 9.07 Yes 6 1.21 Yes 0 0 No -26 0.56 No 40 51.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 33684907 - NM_001243476 STARD13 1 0.7 0.31 16 5.37 84.02 21 5.93 Yes 3 0.95 Yes 0 0 No -20 0.81 Yes 50 90.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 33692379 - NM_001243476 STARD13 1 3.55 1.61 48 3.87 84.02 25 5.57 Yes 35 1.67 Yes 0 0 No -24 0.87 Yes 46 64.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 33694063 - NM_001243476 STARD13 1 0.3 0.15 7 8.07 88.27 30 7.14 Yes 22 1.18 Yes 0 0 No -29 0.65 No 41 66.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 33698646 - NM_001243476 STARD13 1 0.36 0.14 8 9.94 87.29 31 6.76 Yes 62 -4.04 No 0 0 No -30 0.4 No 39 38.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 33713001 - NM_001243476 STARD13 1 0.44 0.25 13 6.54 84.8 13 5.19 No 0 1.87 Yes 25 0.28 Yes -22 0.37 No 48 51.16 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 33729749 - NM_001243476 STARD13 1 0.28 0.22 13 8.57 94.87 31 8.01 Yes 3 0.88 Yes 0 0 No -30 0.77 Yes 40 81.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 33737116 - NM_001243476 STARD13 1 0.24 0.14 8 7.22 90.36 20 5.86 Yes 7 0.83 Yes 0 0 No -24 0.59 No 47 63.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 33740426 - NM_001243476 STARD13 1 0.8 0.35 19 9.26 72.42 29 5.66 Yes 75 -2.97 No 0 0 No -28 0.85 Yes 42 79.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37808004 + NM_001165937 STARD3 1 0.39 0.25 15 6.79 85.02 23 7.26 Yes 10 1.33 Yes 22 0.84 Yes -22 0.92 Yes 48 92.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 37809870 + NM_001165937 STARD3 1 0.48 0.31 17 6.76 81.36 13 7.14 Yes 0 1.41 Yes 25 0.32 Yes -25 0.45 No 26 44.34 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 37813421 + NM_001165937 STARD3 1 0.21 0.17 7 4.79 88.85 27 6.48 Yes 14 0.32 No 0 0 No -26 0.95 Yes 44 85.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 37816412 + NM_001165937 STARD3 1 0.42 0.39 20 5.63 81.92 40 5.62 Yes 8 1.01 Yes 20 0.8 Yes -26 0.59 No 50 60.76 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 37818035 + NM_001165937 STARD3 1 0.21 0.11 7 8.33 90.07 36 6.86 Yes 23 1.17 Yes 0 0 No -35 0.87 Yes 35 92.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 38218691 + NM_032016 STARD3NL 1 12.69 15.18 72 10.19 88.68 29 8.62 Yes 16 1.31 Yes 28 0.95 Yes -28 0.96 Yes 42 96.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 38237811 + NM_032016 STARD3NL 1 0.5 0.64 29 6.23 65.33 30 6.99 Yes 17 0.42 No 29 0.85 Yes -29 0.46 No 41 76.47 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 38241310 + NM_032016 STARD3NL 1 0.09 0.11 7 0.22 83.78 38 6.32 Yes 25 0.85 Yes 41 0.5 Yes -37 0.89 Yes 33 93.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 38241314 + NM_032016 STARD3NL 1 2.61 3.07 63 3.33 0 42 6.63 Yes 29 0.84 Yes 41 0.5 Yes -41 0.91 Yes 29 94.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 110836169 - NM_001308058 STARD4 1 0.1 0.19 8 4.95 76 28 6.06 Yes 15 0.57 No 0 0 No -27 0.41 No 43 49.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 110840742 - NM_001308058 STARD4 1 0.99 2.19 57 10.22 95.65 27 5.74 Yes 61 -2.66 No 26 0.42 Yes -24 0.45 No 50 28.78 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 110842074 - NM_001308058 STARD4 1 0.4 1.03 41 1.02 0 23 7.23 Yes 10 0.74 No 0 0 No -30 0.48 No 43 52.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 110842077 - NM_001308058 STARD4 1 0.06 0.14 8 -13.02 0 20 7.05 Yes 7 0.75 No 0 0 No -27 0.46 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 96852680 - NM_020151 STARD7 1 0.05 0.4 11 5.67 76.48 32 5.53 No 71 0.78 Yes 24 0.96 Yes -25 0.65 No 39 91.42 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 96853039 - NM_020151 STARD7 1 0.03 0.21 13 -9.56 0 26 5.82 Yes 27 0.83 Yes 0 0 No -25 0.95 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 96858855 - NM_020151 STARD7 1 0.03 0.15 10 2.58 64.28 31 7.28 Yes 55 1.87 Yes 0 0 No -30 0.95 Yes 40 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 96858944 - NM_020151 STARD7 1 0.05 0.25 14 8.35 97.25 18 6.07 Yes 36 1.79 Yes 24 0.79 Yes -24 0.62 No 46 70.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 96859007 - NM_020151 STARD7 1 0.03 0.14 8 -4.48 0 13 4.36 No 30 -3.07 No 0 0 No -26 0.64 No 38 55.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 96860745 - NM_020151 STARD7 1 0.05 0.33 16 -8.62 0 22 6.16 Yes 33 0.85 Yes 0 0 No -21 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 96861239 - NM_020151 STARD7 1 0.03 0.1 7 5.87 73.82 14 5.35 No 71 1.92 Yes 0 0 No -23 0.6 No 47 67.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 96862772 - NM_020151 STARD7 1 0.04 0.13 8 -0.34 0 33 5.74 Yes 26 -1.91 No 0 0 No -58 0.62 No 12 55.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 96862777 - NM_020151 STARD7 1 0.07 0.26 13 5.5 90.92 28 5.29 No 21 -1.89 No 0 0 No -58 0.51 No 12 45.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42950367 + NM_020759 STARD9 1 0.79 0.14 7 2.09 0 18 7.24 Yes 5 0.33 No 0 0 No -36 0.46 No 34 42.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42955483 + NM_020759 STARD9 1 3.76 0.46 25 0.94 0 45 9.66 Yes 32 1.22 Yes 0 0 No -47 0.8 Yes 23 90.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42957915 + NM_020759 STARD9 1 2.01 0.13 8 2.52 71.15 43 5.76 Yes 46 1.17 Yes 0 0 No -45 0.38 No 28 59.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 42957915 + NM_020759 STARD9 1 5.84 0.36 15 2.52 71.15 43 5.76 Yes 46 1.17 Yes 0 0 No -45 0.38 No 28 59.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 42966068 + NM_020759 STARD9 1 33.46 1.57 50 9.63 82.6 39 6.32 Yes 26 2.53 Yes 0 0 No -38 0.87 Yes 32 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42983784 + NM_020759 STARD9 1 4.13 0.36 21 10.64 92.93 29 5.92 Yes 16 0.92 Yes 0 0 No -28 0.95 Yes 42 96.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42983784 + NM_020759 STARD9 1 2.43 0.18 13 10.64 92.93 29 5.92 Yes 16 0.92 Yes 0 0 No -28 0.95 Yes 42 96.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42986657 + NM_020759 STARD9 1 12.94 1.1 47 7.15 83.08 48 7.21 Yes 35 1.11 Yes 27 0.48 Yes -47 0.8 Yes 23 91.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 191840608 - NM_139266 STAT1 1 0.03 0.6 32 0.36 0 15 3.87 No 72 -4.94 No 0 0 No -25 0.57 No 45 73.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 191840638 - NM_139266 STAT1 1 0.01 0.17 8 -2.14 57.08 37 6.82 Yes -4 0.13 No 28 0.69 Yes -23 0.69 Yes 47 57.34 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 191843333 - NM_139266 STAT1 1 0.12 1.68 51 8.46 90.87 34 5.85 Yes 56 -1.84 No 0 0 No -20 0.39 No 44 39.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191843812 - NM_139266 STAT1 1 0.07 0.78 35 8.15 86.6 29 5.48 No -3 0.43 No 0 0 No -28 0.87 Yes 42 97.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191843833 - NM_139266 STAT1 1 0.12 1.28 45 10.16 88.27 26 5.25 No 48 0.04 No 0 0 No -25 0.52 No 45 65.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191848485 - NM_139266 STAT1 1 0.02 0.31 17 0.39 0 18 4.44 No 16 0.91 Yes 21 0.84 Yes -17 0.6 No 36 71.68 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 191848496 - NM_139266 STAT1 1 0.01 0.11 8 7.33 86.07 18 4.95 No 5 0.91 Yes 21 0.84 Yes -23 0.84 Yes 47 78.22 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 191851668 - NM_139266 STAT1 1 0.15 2.07 58 0.94 0 15 3.45 No 19 0.16 No 0 0 No -31 0.85 Yes 39 82.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191851793 - NM_139266 STAT1 1 0.02 0.18 10 -2.64 82.57 25 7.73 Yes 73 0.82 Yes 0 0 No -24 0.82 Yes 46 77.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 191853930 - NM_139266 STAT1 1 0.02 0.24 15 11.35 80.93 39 6.41 Yes 67 0.48 No 0 0 No -38 0.62 No 32 71.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 191856117 - NM_139266 STAT1 1 0.02 0.28 16 11.63 99.46 20 6.4 Yes 7 2.5 Yes 0 0 No -19 0.68 Yes 51 73.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 191862683 - NM_139266 STAT1 1 0.01 0.11 7 2.24 74.23 34 5.34 No 64 0.58 No 0 0 No -20 0.47 No 49 52.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191862730 - NM_139266 STAT1 1 0.02 0.24 11 -5.49 0 50 4.44 No 17 0.62 No 0 0 No -29 0.63 No 41 58.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191862730 - NM_139266 STAT1 1 0.02 0.31 14 -5.49 0 50 4.44 No 17 0.62 No 0 0 No -29 0.63 No 41 58.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191864424 - NM_139266 STAT1 1 0.25 3.69 66 0.01 0 15 3.98 No 30 0.68 No 0 0 No -29 0.5 No 41 60.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191865884 - NM_139266 STAT1 1 0.01 0.17 11 -3.62 0 11 3.72 No 12 0.55 No 0 0 No -28 0.78 Yes 42 74.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191866046 - NM_139266 STAT1 1 0.01 0.22 15 0.92 0 13 4.36 No 36 0.56 No 0 0 No -48 0.7 Yes 48 90.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191866064 - NM_139266 STAT1 1 0.01 0.19 13 5.65 74.27 31 5.65 Yes 1 0.62 No 0 0 No -30 0.93 Yes 40 88.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 191867934 - NM_139266 STAT1 1 0.01 0.22 12 5.7 79.38 33 6.55 Yes 20 0.82 Yes 0 0 No -26 0.63 No 44 53.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191872376 - NM_139266 STAT1 1 0.03 0.49 28 -0.15 0 21 4.58 No 47 0.44 No 0 0 No -49 0.49 No 21 66.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 191873773 - NM_139266 STAT1 1 0.02 0.28 15 6.75 80.5 45 8.01 Yes 32 1.38 Yes 0 0 No -37 0.32 No 40 59.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191875176 - NM_139266 STAT1 1 4.1 46.5 72 6.69 76.35 53 6.44 Yes 0 0.88 Yes 24 0.47 Yes -21 0.52 No 46 65.21 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 191875176 - NM_139266 STAT1 1 0.01 0.1 7 6.69 76.35 53 6.44 Yes 0 0.88 Yes 24 0.47 Yes -21 0.52 No 46 65.21 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 191878401 - NM_139266 STAT1 1 0.21 1.63 57 -0.14 0 25 5.91 Yes 51 1.13 Yes 0 0 No -31 0.65 No 46 74.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 191878404 - NM_139266 STAT1 1 0.01 0.13 8 -14.73 0 22 5.65 Yes 48 1.12 Yes 0 0 No -28 0.63 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 191878427 - NM_139266 STAT1 1 0.11 1 26 6.96 80.75 38 6.34 Yes 25 1.14 Yes 27 0.81 Yes -37 0.91 Yes 33 94.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 56740986 - NM_198332 STAT2 1 0.14 0.24 8 -11.67 0 18 4.22 No 5 1.28 Yes 0 0 No -25 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 56740987 - NM_198332 STAT2 1 1.46 2.11 58 5.26 81.97 17 4.15 No 4 1.29 Yes 0 0 No -24 0.83 Yes 46 88.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56742636 - NM_198332 STAT2 1 0.31 0.32 21 9.33 88.99 35 6.4 Yes 39 1.7 Yes 0 0 No -34 0.92 Yes 36 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56742636 - NM_198332 STAT2 1 0.78 0.88 43 9.33 88.99 35 6.4 Yes 39 1.7 Yes 0 0 No -34 0.92 Yes 36 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56742814 - NM_198332 STAT2 1 2.89 4.36 68 4.91 71.79 27 5.35 No 48 0.6 No 0 0 No -23 0.48 No 45 56.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56742814 - NM_198332 STAT2 1 0.14 0.21 12 4.91 71.79 27 5.35 No 48 0.6 No 0 0 No -23 0.48 No 45 56.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56742868 - NM_198332 STAT2 1 1.09 1.54 53 -5.22 0 21 5 No 8 0.39 No 30 0.92 Yes -20 0.88 Yes 50 87.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 56743284 - NM_198332 STAT2 1 0.07 0.13 8 -0.67 0 13 4.36 No 23 0.95 Yes 0 0 No -35 0.65 No 35 75.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 56744973 - NM_198332 STAT2 1 0.06 0.11 7 1.5 73.91 38 6.63 Yes 25 1.17 Yes 35 0.78 Yes -37 0.7 Yes 33 81.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 56748396 - NM_198332 STAT2 1 0.18 0.26 14 -6.13 81.03 22 6.5 Yes 9 1.35 Yes 0 0 No -21 0.64 No 42 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 56749133 - NM_198332 STAT2 1 0.17 0.36 21 0.3 67.24 28 5.81 Yes 38 1.87 Yes 0 0 No -27 0.94 Yes 43 94.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56749588 - NM_198332 STAT2 1 357.16 138.06 72 8.05 80.38 35 6.73 Yes 22 0.2 No 28 0.65 Yes -28 0.62 No 46 46.49 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 56750066 - NM_198332 STAT2 1 0.56 0.9 43 0.95 0 29 6.56 Yes 16 1.71 Yes 24 0.9 Yes -28 0.92 Yes 42 95.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 56750407 - NM_198332 STAT2 1 0.29 0.39 20 1.1 61.55 32 5.27 No 73 1.05 Yes 0 0 No -31 0.48 No 39 35.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40467841 - NM_003150 STAT3 1 0.02 0.1 7 -3.69 49.55 11 5.2 No 39 -2.54 No 28 0.92 Yes -22 0.32 No 57 36.88 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 40468205 - NM_003150 STAT3 1 0.04 0.17 11 4.56 77.97 34 6.04 Yes 21 0.52 No 0 0 No -33 0.76 Yes 37 71.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40468870 - NM_003150 STAT3 1 12.6 41.96 72 7.58 71.56 28 6.85 Yes 15 1.35 Yes 25 0.93 Yes -27 0.88 Yes 43 66.55 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 40468870 - NM_003150 STAT3 1 0.05 0.17 11 7.58 71.56 28 6.85 Yes 15 1.35 Yes 25 0.93 Yes -27 0.88 Yes 43 66.55 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 40468908 - NM_003150 STAT3 1 0.05 0.17 11 -0.25 0 17 4.58 No 41 0.59 No 25 0.93 Yes -53 0.68 Yes 17 63.64 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 40472065 - NM_003150 STAT3 1 0.17 0.13 9 9.13 87.25 19 6.22 Yes 6 1.3 Yes 0 0 No -18 0.62 No 52 62.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40481810 - NM_003150 STAT3 1 0.82 2.21 59 4.5 79.09 17 5.28 No -1 -2.25 No 22 0.93 Yes -25 0.52 No 45 63.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 40485010 - NM_003150 STAT3 1 0.1 0.24 14 3.41 0 31 5.04 No 12 1.23 Yes 0 0 No -24 0.84 Yes 46 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40489294 - NM_003150 STAT3 1 0.04 0.15 8 6.05 90.51 25 5.44 No 12 0.25 No 0 0 No -24 0.71 Yes 46 83.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40489603 - NM_003150 STAT3 1 0.04 0.11 7 -2.26 69.03 26 6.78 Yes 13 1.84 Yes 0 0 No -25 0.91 Yes 45 87.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40491424 - NM_003150 STAT3 1 0.04 0.18 11 -2.64 0 21 6.96 Yes 8 1.82 Yes 0 0 No -32 0.62 No 38 92.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 40500539 - NM_003150 STAT3 1 52.55 46.21 72 1.6 69.54 24 5.29 No 54 -2.75 No 23 0.82 Yes -23 0.91 Yes 47 87.78 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 40500558 - NM_003150 STAT3 1 124.59 108.85 72 5.17 84.89 26 7.94 Yes 72 1.53 Yes 25 0.51 Yes -25 0.54 No 46 67.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 40526225 - NM_003150 STAT3 1 0.34 0.26 15 11.37 88.69 26 5.66 Yes 13 1.31 Yes 25 0.89 Yes -25 0.85 Yes 45 91.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 40539667 - NM_003150 STAT3 1 0.27 0.19 11 11.27 85.98 24 5.01 No 11 1.11 Yes 0 0 No -23 0.82 Yes 47 66.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 40440947 + NM_001288720 STAT5A 1 0.44 0.33 20 6.4 79.83 20 5.08 No 7 1.03 Yes 0 0 No -19 0.83 Yes 51 87.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40441820 + NM_001288720 STAT5A 1 0.18 0.11 7 6.54 84.25 30 5.41 No 17 0.03 No 0 0 No -29 0.85 Yes 41 80.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40441911 + NM_001288720 STAT5A 1 0.32 0.35 17 4.1 75.05 18 6.08 Yes 72 2.34 Yes 0 0 No -17 0.7 Yes 53 69.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 40447641 + NM_001288720 STAT5A 1 0.08 0.15 10 5.32 0 29 6.23 Yes 54 1.54 Yes 0 0 No -28 0.73 Yes 42 84.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40447641 + NM_001288720 STAT5A 1 0.14 0.25 14 5.32 0 29 6.23 Yes 54 1.54 Yes 0 0 No -28 0.73 Yes 42 84.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40451773 + NM_001288720 STAT5A 1 0.13 0.22 16 3.31 0 36 6.62 Yes 17 0.75 No 0 0 No -29 0.84 Yes 41 81.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40458756 + NM_001288720 STAT5A 1 0.08 0.11 8 10.79 88.27 21 6.4 Yes 8 1.62 Yes 0 0 No -20 0.85 Yes 50 91.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 40459694 + NM_001288720 STAT5A 1 0.22 0.46 21 7.58 77.03 39 6.07 Yes 23 -1.22 No 0 0 No -25 0.43 No 45 53.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40460069 + NM_001288720 STAT5A 1 0.14 0.29 18 10.48 96.67 36 6.24 Yes 23 0.09 No 0 0 No -27 0.33 No 43 58.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 40354821 - NM_012448 STAT5B 1 0.08 0.1 7 -4.6 0 16 3.87 No 19 0.02 No 0 0 No -27 0.86 Yes 43 85.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40359684 - NM_012448 STAT5B 1 0.12 0.15 11 8.38 71.87 29 5.44 No 28 1.62 Yes 0 0 No -28 0.65 No 42 85.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 40359707 - NM_012448 STAT5B 1 0.12 0.15 9 7.17 87.68 18 6.48 Yes 5 1.59 Yes 0 0 No -17 0.55 No 47 47.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40366621 - NM_012448 STAT5B 1 0.28 0.24 16 6.08 74.56 27 7.14 Yes 14 0.3 No 0 0 No -26 0.68 Yes 44 57.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 40375570 - NM_012448 STAT5B 1 0.14 0.21 12 2.63 0 63 7.53 Yes 43 1.03 Yes 0 0 No -55 0.57 No 43 72.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 40379676 - NM_012448 STAT5B 1 0.93 1 44 4.42 82.93 23 5.08 No 31 0.57 No 0 0 No -22 0.9 Yes 48 88.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40381552 - NM_012448 STAT5B 1 0.71 0.78 31 10.03 94.37 26 5.29 No 13 0.76 No 0 0 No -25 0.89 Yes 45 90.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57490697 - NM_001178081 STAT6 1 0.06 0.25 17 7.35 82.7 19 5.66 Yes 6 2.46 Yes 0 0 No -18 0.67 Yes 45 61.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 57492713 - NM_001178081 STAT6 1 0.04 0.17 11 1.61 68.63 14 5.39 No 33 0.03 No 25 0.85 Yes -25 0.31 No 45 40.42 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 57493213 - NM_001178081 STAT6 1 0.03 0.13 9 4.3 0 19 4.22 No 20 0.24 No 0 0 No -32 0.91 Yes 38 87.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 57493603 - NM_001178081 STAT6 1 0.12 0.39 21 8.68 82.75 32 4.75 No 19 0.25 No 19 0.95 Yes -35 0.59 No 45 59.91 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 57493838 - NM_001178081 STAT6 1 0.12 0.24 14 3.89 82.16 13 6.48 Yes 48 1.65 Yes 0 0 No -60 0.75 Yes 10 65.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 57494683 - NM_001178081 STAT6 1 2.43 5.03 71 9.95 85.59 33 4.92 No 45 1.11 Yes 26 0.54 Yes -21 0.7 Yes 49 79.53 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 57496307 - NM_001178081 STAT6 1 0.15 0.53 26 -6.93 0 17 4 No 68 -6.21 No 29 0.73 Yes -19 0.71 Yes 51 53.53 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 57498595 - NM_001178081 STAT6 1 0.09 0.29 18 -5.97 67.71 17 5.81 Yes 12 1.3 Yes 0 0 No -24 0.86 Yes 46 64.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 57498635 - NM_001178081 STAT6 1 0.07 0.22 14 -0.33 65.5 30 6.86 Yes 37 0.66 No 22 0.89 Yes -29 0.86 Yes 41 82.41 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 57499352 - NM_001178081 STAT6 1 0.12 0.33 19 2.38 81.91 27 5.57 Yes 38 2.17 Yes 0 0 No -26 0.85 Yes 44 74.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 57500102 - NM_001178081 STAT6 1 0.05 0.14 8 5.77 85.03 26 5.48 No 29 0.6 No 0 0 No -41 0.87 Yes 29 71.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47733717 - NM_001319135 STAU1 1 0.34 1 41 4.75 84.87 19 6.33 Yes 6 0.08 No 0 0 No -32 0.35 No 45 56.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 47735309 - NM_001319135 STAU1 1 0.1 0.15 10 6.19 79.44 15 5.91 Yes 45 0.78 Yes 0 0 No -28 0.69 Yes 42 66.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 47739767 - NM_001319135 STAU1 1 0.08 0.22 12 2.41 0 9 3.87 No 69 0.93 Yes 29 0.74 Yes -33 0.66 No 35 60.92 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 47741143 - NM_001319135 STAU1 1 25.49 39.28 72 5.66 79.73 27 5.18 No 11 0.59 No 26 0.81 Yes -23 0.51 No 47 53.98 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 47751375 - NM_001319135 STAU1 1 4.5 7.04 69 11.41 96.62 29 5.13 No 16 1.25 Yes 0 0 No -28 0.93 Yes 42 93.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47761187 - NM_001319135 STAU1 1 1.68 2.32 64 7.25 82.4 30 6 Yes 17 0.54 No 0 0 No -29 0.81 Yes 41 72.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47766263 - NM_001319135 STAU1 1 0.65 0.9 42 5.55 90.99 20 4.88 No 7 1.25 Yes 0 0 No -19 0.81 Yes 51 94.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47770633 - NM_001319135 STAU1 1 0.29 0.11 8 -6.25 0 18 4.36 No 33 0.2 No 26 0.18 Yes -33 0.71 Yes 37 62.8 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 47775035 - NM_001319135 STAU1 1 0.57 0.29 14 9.37 85.29 27 5.61 Yes 14 0.52 No 26 0.55 Yes -29 0.62 No 41 85.96 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 47775684 - NM_001319135 STAU1 1 2.33 0.97 44 10.43 86.44 26 6.14 Yes 13 1.53 Yes 25 0.73 Yes -25 0.82 Yes 45 80.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 47775684 - NM_001319135 STAU1 1 11.53 4.71 66 10.43 86.44 26 6.14 Yes 13 1.53 Yes 25 0.73 Yes -25 0.82 Yes 45 80.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 47789139 - NM_001319135 STAU1 1 1.17 0.36 20 4.09 0 20 4.58 No 7 0.22 No 0 0 No -19 0.53 No 52 50.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 74473775 - NM_001164380 STAU2 1 0.82 0.78 38 9.42 89.32 30 5.27 No 17 0.5 No 25 0.37 Yes -34 0.55 No 36 86.84 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 74476236 - NM_001164380 STAU2 1 0.63 0.67 36 6.72 81.21 23 4.15 No 10 0.06 No 0 0 No -26 0.42 No 44 40.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 74566132 - NM_001164380 STAU2 1 2.93 2.49 62 8.7 84.24 21 4.46 No 14 0.98 Yes 26 0.74 Yes -26 0.66 Yes 44 66.99 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 74581346 - NM_001164380 STAU2 1 0.19 0.18 13 8.38 82.13 28 5.87 Yes 45 1.65 Yes 20 0.64 Yes -20 0.68 Yes 50 62.36 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 74584666 - NM_001164380 STAU2 1 0.32 0.24 13 3.28 69.09 65 8.22 Yes 52 1 Yes 22 0.79 Yes -34 0.79 Yes 36 85.34 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 74609678 - NM_001164380 STAU2 1 0.87 0.39 23 11.16 93.03 18 6.37 Yes 5 1.06 Yes 21 0.52 Yes -21 0.68 Yes 49 73.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 74621413 - NM_001164380 STAU2 1 1.88 0.64 33 2.76 62.57 28 5.45 No 15 0.35 No 0 0 No -28 0.44 No 42 62.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 74628665 - NM_001164380 STAU2 1 1.99 0.64 29 11.39 97.96 24 4.93 No 11 0.56 No 0 0 No -23 0.9 Yes 47 88.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 74651053 - NM_001164380 STAU2 1 0.49 0.47 26 8.68 84.25 33 6.08 Yes 61 -0.76 No 0 0 No -32 0.83 Yes 38 84.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 74652102 - NM_001164380 STAU2 1 0.72 0.46 23 -0.5 84.77 31 6.86 Yes 61 0.51 No 0 0 No -30 0.97 Yes 40 96.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 74654602 - NM_001164380 STAU2 1 0.43 0.26 17 3.6 85.02 17 6.93 Yes 61 1.25 Yes 19 0.61 Yes -27 0.68 Yes 54 74.58 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 172746160 - NM_003714 STC2 1 1.04 0.18 10 7.16 91.89 22 4.8 No 9 -0.8 No 0 0 No -21 0.59 No 49 70.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 172751688 - NM_003714 STC2 1 0.42 0.13 8 9.6 81.99 30 5.92 Yes 17 0.73 No 0 0 No -29 0.89 Yes 41 92.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 89787780 + NM_012449 STEAP1 1 0.43 0.18 10 9.81 88.27 20 6.7 Yes 7 1.47 Yes 0 0 No -19 0.48 No 44 54.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 120015032 + NM_182915 STEAP3 1 0.42 0.13 7 0.27 71.51 20 3.92 No 60 -0.94 No 19 0.9 Yes -19 0.78 Yes 47 59.26 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 47727057 - NM_003035 STIL 1 0.99 0.56 28 7.64 86.87 68 8.21 Yes 60 0.31 No 0 0 No -31 0.69 Yes 39 73.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 47728789 - NM_003035 STIL 1 60.25 23.35 72 5.26 85.88 23 6.56 Yes 68 1.49 Yes 22 0.92 Yes -22 0.78 Yes 48 94.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 47733338 - NM_003035 STIL 1 0.48 0.22 11 12.17 88.27 33 4.38 No 20 1.08 Yes 0 0 No -32 0.65 No 38 68.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 47747374 - NM_003035 STIL 1 0.3 0.36 19 7.18 76.82 45 5.73 Yes 14 0.73 No 0 0 No -26 0.89 Yes 44 91.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 47749214 - NM_003035 STIL 1 0.45 0.29 16 7.67 82.47 33 6.23 Yes 55 1.19 Yes 0 0 No -32 0.62 No 38 69.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 47761519 - NM_003035 STIL 1 0.16 0.13 7 -10.33 0 24 3.68 No 11 0.16 No 0 0 No -23 0.7 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 47765641 - NM_003035 STIL 1 0.79 0.53 24 7.85 81.62 26 5.57 Yes 13 0.55 No 25 0.74 Yes -25 0.69 Yes 45 62.31 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 47765745 - NM_003035 STIL 1 0.81 0.56 26 4.98 87.69 21 4.63 No 22 0.88 Yes 0 0 No -20 0.83 Yes 50 85.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 47778650 - NM_003035 STIL 1 0.53 0.19 10 1.87 66.51 30 5.48 No 69 0.51 No 0 0 No -29 0.78 Yes 50 65.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 47778691 - NM_003035 STIL 1 0.62 0.28 18 2.28 78.98 27 5.29 No 72 0.78 Yes 0 0 No -26 0.88 Yes 44 92.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 47778694 - NM_003035 STIL 1 4.35 1.76 54 2.5 73.41 24 5 No 69 0.79 Yes 23 0.95 Yes -23 0.91 Yes 47 94.67 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 47778969 - NM_003035 STIL 1 1.27 0.4 21 3.64 85.06 27 3.66 No 2 0.77 No 0 0 No -26 0.51 No 15 52.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 47778987 - NM_003035 STIL 1 3.68 1.33 52 -1.75 0 16 3.87 No 69 0 No 0 0 No -37 0.34 No 43 73.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 47778993 - NM_003035 STIL 1 2.85 0.83 39 2.83 83.14 32 6.51 Yes 53 -1.74 No 0 0 No -31 0.37 No 49 55.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 47779602 - NM_003035 STIL 1 2.95 1.07 45 5.82 89.85 12 3.63 No 60 -3.44 No 0 0 No -19 0.48 No 51 48.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 47779619 - NM_003035 STIL 1 3.69 1.4 46 -3.52 0 13 4.12 No 74 0.82 Yes 0 0 No -18 0.52 No 52 67.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 3913462 + NM_003156 STIM1 1 0.15 0.14 10 2.13 75.06 46 6.24 Yes 22 -3.03 No 0 0 No -29 0.34 No 41 45.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 3950121 + NM_003156 STIM1 1 0.62 0.65 26 3.29 0 35 8.08 Yes 22 0.94 Yes 0 0 No -34 0.64 No 36 53.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 4052630 + NM_003156 STIM1 1 0.46 0.53 28 10.28 89.36 35 6.38 Yes 54 -2.8 No 0 0 No -27 0.56 No 47 68.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 4070743 + NM_003156 STIM1 1 0.23 0.26 17 9.97 86.87 24 7.34 Yes 11 1.42 Yes 23 0.86 Yes -23 0.91 Yes 47 93.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 4085426 + NM_003156 STIM1 1 0.2 0.21 10 2.7 72.02 46 7.87 Yes 33 1.18 Yes 0 0 No -45 0.69 Yes 25 64.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 4096484 + NM_003156 STIM1 1 0.32 0.47 26 2.92 84.33 26 4.9 No 13 1.03 Yes 0 0 No -25 0.62 No 45 85.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 4104090 + NM_003156 STIM1 1 0.12 0.14 10 -0.8 75.62 32 6.85 Yes 23 0.85 Yes 23 0.91 Yes -35 0.89 Yes 35 91.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 4104471 + NM_003156 STIM1 1 0.3 0.33 17 2.44 78.69 22 4.69 No 9 0.91 Yes 23 0.62 Yes -21 0.97 Yes 49 95.71 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 4105902 + NM_003156 STIM1 1 0.19 0.19 11 6.03 70.56 43 6.56 Yes 30 0.41 No 38 0.22 Yes -42 0.39 No 28 53.84 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 26967716 + NM_020860 STIM2 1 0.51 0.36 23 8.38 83.71 33 8.41 Yes 20 0.8 Yes 0 0 No -24 0.74 Yes 46 71.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 27002061 + NM_020860 STIM2 1 0.73 0.39 24 9.81 85.7 38 6.98 Yes 25 1.12 Yes 0 0 No -25 0.67 Yes 45 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 27009604 + NM_020860 STIM2 1 10.41 4.28 69 7.67 90.95 23 4.8 No 60 0.51 No 22 0.91 Yes -22 0.61 No 48 72.36 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr4 27010523 + NM_020860 STIM2 1 0.83 0.38 21 6.29 83.2 27 6.24 Yes 14 2.37 Yes 0 0 No -26 0.86 Yes 44 90.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 27021021 + NM_020860 STIM2 1 22.96 6.33 71 10.03 87.77 26 5.35 No 42 1.25 Yes 25 0.81 Yes -22 0.6 No 45 69.79 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 27022622 + NM_020860 STIM2 1 3.49 0.94 42 -3.24 0 14 4 No 66 2.01 Yes 27 0.74 Yes -34 0.71 Yes 36 74.42 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 63960615 + NM_006819 STIP1 1 0.13 0.69 32 4.19 77.88 21 6 Yes -1 0.27 No 0 0 No -20 0.62 No 50 60.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 63961732 + NM_006819 STIP1 1 0.05 0.29 16 -19.9 58.28 18 4.68 No 63 -5.91 No 26 0.68 Yes -46 0.3 No 53 33.19 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 63961952 + NM_006819 STIP1 1 0.06 0.43 19 -14.58 70.05 27 4.43 No 14 1.01 Yes 0 0 No -32 0.77 Yes 38 76.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63965301 + NM_006819 STIP1 1 0.03 0.25 10 6.02 79.38 25 6 Yes 12 1.74 Yes 29 0.94 Yes -24 0.88 Yes 46 90.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 63967396 + NM_006819 STIP1 1 0.13 0.93 37 2.24 78.05 30 5.28 No 46 1.46 Yes 18 0.46 Yes -26 0.56 No 47 54.1 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 63970483 + NM_006819 STIP1 1 0.02 0.13 8 6.94 75.85 38 5.97 Yes 41 -1.82 No 0 0 No -25 0.61 No 45 50.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 63971504 + NM_006819 STIP1 1 0.11 0.65 17 2.08 76.32 20 4.95 No 7 0 No 29 0.83 Yes -20 0.75 Yes 50 80.27 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 63971640 + NM_006819 STIP1 1 0.04 0.19 12 0.02 63.82 41 7.7 Yes 31 1.38 Yes 0 0 No -43 0.43 No 27 69.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 171472485 - NM_005990 STK10 1 0.82 1.26 44 4.25 83.86 49 5.66 Yes 57 -2.06 No 32 0.29 Yes -32 0.69 Yes 38 66.03 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 171481687 - NM_005990 STK10 1 0.07 0.13 8 4.21 0 16 4.58 No 26 1.03 Yes 0 0 No -38 0.73 Yes 36 55.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 171488297 - NM_005990 STK10 1 0.05 0.1 7 0.58 68.01 19 4.03 No 54 0.8 Yes 27 0.5 Yes -22 0.6 No 46 19.74 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 171491261 - NM_005990 STK10 1 0.2 0.39 23 9.64 88.41 20 8.01 Yes 7 2.38 Yes 0 0 No -26 0.52 No 51 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 171530496 - NM_005990 STK10 1 0.12 0.19 12 7.08 83.72 37 6.17 Yes 5 1.46 Yes 0 0 No -22 0.62 No 53 58.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 171534078 - NM_005990 STK10 1 0.18 0.43 21 10 83.14 135 13.11 Yes NA NA NA 30 0.41 Yes -19 0.41 No 12 67.9 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 171540484 - NM_005990 STK10 1 0.21 0.29 17 7.34 84.81 34 6.79 Yes 21 0.15 No 0 0 No -30 0.57 No 34 73.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 171555815 - NM_005990 STK10 1 0.13 0.29 13 6.43 83.93 21 5 No 67 0.85 Yes 0 0 No -20 0.9 Yes 50 85.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 171601576 - NM_005990 STK10 1 0.12 0.19 13 9.55 80.71 56 8.31 Yes 9 -0.8 No 0 0 No -53 0.39 No 18 56.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1207315 + NM_000455 STK11 1 0.14 0.28 15 -5.07 66.25 63 9.01 Yes 50 2.44 Yes 0 0 No -62 0.46 No 60 20.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1209657 + NM_000455 STK11 1 0.15 0.31 19 4.74 76.05 17 4.57 No 65 -4.77 No 0 0 No -23 0.74 Yes 47 56.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1212307 + NM_000455 STK11 1 0.17 0.33 18 2.52 0 41 10.65 Yes 28 1.79 Yes 0 0 No -40 0.51 No 29 69.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1216266 + NM_000455 STK11 1 2.05 4.24 71 6.62 78.88 22 6.92 Yes 9 0.87 Yes 21 0.75 Yes -29 0.69 Yes 41 85.28 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1221183 + NM_000455 STK11 1 0.06 0.14 8 -3.39 0 20 4.31 No -3 0.61 No 33 0.95 Yes -9 0.68 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 1221619 + NM_000455 STK11 1 0.24 0.44 25 5.5 89.53 27 5.73 Yes 69 0.76 No 0 0 No -26 0.52 No 38 61.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1221661 + NM_000455 STK11 1 0.31 0.58 27 2.58 72.15 35 6.4 Yes 22 -0.44 No 0 0 No -34 0.76 Yes 36 84.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1221664 + NM_000455 STK11 1 0.72 1.32 48 1.46 68.82 38 6.63 Yes 25 -0.44 No 0 0 No -37 0.75 Yes 33 73.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1221694 + NM_000455 STK11 1 0.98 1.81 56 5.77 76.31 11 6.24 Yes 55 -0.44 No 0 0 No -25 0.78 Yes 45 75.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1222878 + NM_000455 STK11 1 0.11 0.21 10 3.41 71.45 31 5.92 Yes 18 0.44 No 0 0 No -30 0.79 Yes 40 84.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1222896 + NM_000455 STK11 1 0.08 0.14 9 1.6 0 13 4.36 No 36 0.41 No 0 0 No -48 0.35 No 22 44.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1223636 + NM_000455 STK11 1 4.82 6.88 72 12.26 82.63 25 7.14 Yes 12 1.71 Yes 24 0.93 Yes -24 0.93 Yes 46 91.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1226457 + NM_000455 STK11 1 3.84 5.46 71 6.4 0 33 5.56 No 25 0.7 No 27 0.85 Yes -32 0.83 Yes 38 75.15 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 220471700 + NM_052902 STK11IP 1 0.55 0.18 10 4.36 83.4 17 4.69 No 4 -0.2 No 0 0 No -24 0.64 No 46 69.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 220476401 + NM_052902 STK11IP 1 2.98 1.13 45 3.23 72.61 44 7.35 Yes 31 1.01 Yes 0 0 No -43 0.92 Yes 27 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 220476449 + NM_052902 STK11IP 1 0.52 0.18 12 7.11 82.54 17 5.72 Yes NA NA NA 0 0 No -28 0.82 Yes 42 52.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 220478522 + NM_052902 STK11IP 1 0.32 0.13 8 11.36 93.27 22 5.74 Yes 72 1.82 Yes 0 0 No -21 0.79 Yes 49 79.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 220479872 + NM_052902 STK11IP 1 2.39 1.07 45 6.24 78.91 26 8.12 Yes 13 2.3 Yes 0 0 No -25 0.78 Yes 45 92.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 220480428 + NM_052902 STK11IP 1 1.13 0.22 12 8.49 88.13 31 4.65 No 29 1.31 Yes 30 0.81 Yes -30 0.56 No 53 51.18 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 220111243 + NM_001330214 STK16 1 3.25 1 42 7.56 80.84 20 5.45 No 7 0.81 Yes 19 0.91 Yes -19 0.9 Yes 51 94.24 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 220111323 + NM_001330214 STK16 1 0.59 0.19 11 4.45 72.1 19 4.69 No 30 0.65 No 0 0 No -21 0.47 No 52 60.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 220111460 + NM_001330214 STK16 1 3.34 0.63 26 1.24 72.29 25 5.48 No 12 0.81 Yes 0 0 No -24 0.64 No 46 50.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 220111817 + NM_001330214 STK16 1 0.43 0.31 15 5.56 78.28 20 5.8 Yes 68 -5.54 No 25 0.76 Yes -20 0.44 No 50 72.68 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 43663342 + NM_004760 STK17A 1 0.16 0.31 19 7.48 89.39 20 5.74 Yes 53 1.18 Yes 0 0 No -19 0.84 Yes 51 81.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 43663360 + NM_004760 STK17A 1 4.51 9.4 72 2.75 80.41 23 5.19 No 71 1.19 Yes 0 0 No -22 0.94 Yes 48 97.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 43663398 + NM_004760 STK17A 1 0.1 0.18 12 7.15 75.38 33 5.33 No 48 0.39 No 0 0 No -26 0.4 No 44 54.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 43663342 + NM_004760 STK17A 1 0.1 0.21 12 7.48 89.39 20 5.74 Yes 53 1.18 Yes 0 0 No -19 0.84 Yes 51 81.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 43663360 + NM_004760 STK17A 1 0.35 0.71 33 2.75 80.41 23 5.19 No 71 1.19 Yes 0 0 No -22 0.94 Yes 48 97.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 43664104 + NM_004760 STK17A 1 0.04 0.21 14 -2.79 0 23 5.01 No 36 0.37 No 25 0.94 Yes -12 0.66 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 43664118 + NM_004760 STK17A 1 0.06 0.28 15 -9.67 72.4 27 4.85 No 50 0.37 No 0 0 No -26 0.67 Yes 44 73.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 197002408 - NM_004226 STK17B 1 0.24 0.81 38 5.93 83.79 37 6 Yes 62 0.6 No 0 0 No -25 0.4 No 39 63.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 197002487 - NM_004226 STK17B 1 0.11 0.38 23 6.57 71.18 26 5.56 Yes 13 0.52 No 28 0.81 Yes -25 0.73 Yes 45 76.79 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 197004545 - NM_004226 STK17B 1 0.04 0.15 9 3.38 65.34 15 7.59 Yes 39 0.02 No 23 0.75 Yes -29 0.31 No 48 38.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 197012140 - NM_004226 STK17B 1 0.08 0.25 10 8.23 86.92 32 7.37 Yes 19 1.34 Yes 0 0 No -25 0.82 Yes 45 81.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 197019768 - NM_004226 STK17B 1 1.76 4.81 67 4.48 75.1 43 7.57 Yes 30 1.23 Yes 0 0 No -33 0.73 Yes 37 68.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 197020160 - NM_004226 STK17B 1 0.04 0.17 10 4.03 62.99 23 6.53 Yes 43 1.7 Yes 0 0 No -34 0.31 No 36 53.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 197020799 - NM_004226 STK17B 1 0.14 0.33 19 -0.11 63.27 42 6.9 Yes 73 0.34 No 0 0 No -41 0.52 No 29 82.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 197030459 - NM_004226 STK17B 1 0.39 1.25 45 8.35 89.65 34 4.75 No 51 0.5 No 28 0.79 Yes -28 0.86 Yes 42 80.44 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 197035333 - NM_004226 STK17B 1 0.06 0.21 13 8.64 91.42 26 5.29 No 19 0.86 Yes 0 0 No -25 0.83 Yes 45 93.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 99108815 - NM_003576 STK24 1 0.45 0.67 32 7.9 77.52 40 6.63 Yes 27 1.28 Yes 39 0.66 Yes -39 0.87 Yes 31 93.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 99109129 - NM_003576 STK24 1 0.11 0.17 11 7.26 84.01 29 6.86 Yes 16 0.57 No 0 0 No -28 0.59 No 42 42.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 99114144 - NM_003576 STK24 1 0.05 0.17 11 -4.73 0 11 3 No 24 1.51 Yes 0 0 No -36 0.93 Yes 34 90.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 99118423 - NM_003576 STK24 1 0.04 0.17 10 10.71 87.07 24 5.85 Yes 52 1.28 Yes 0 0 No -23 0.82 Yes 47 63.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 99118812 - NM_003576 STK24 1 0.08 0.25 13 1.32 0 26 5.57 Yes 68 0.27 No 0 0 No -26 0.76 Yes 44 81.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 99127609 - NM_003576 STK24 1 0.06 0.26 16 2.21 0 32 5.65 Yes 75 0.85 Yes 0 0 No -31 0.65 No 39 83.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 99157308 - NM_003576 STK24 1 0.7 2.03 61 6.07 96.97 17 7.37 Yes 61 1.35 Yes 28 0.43 Yes -20 0.45 No 50 47.99 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 242435976 - NM_001271978 STK25 1 0.12 0.14 8 3.55 77.48 22 5.2 No 55 -3.41 No 24 0.8 Yes -21 0.85 Yes 49 71.45 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 242436794 - NM_001271978 STK25 1 0.68 0.72 33 9.68 99.52 17 5.39 No 54 1.61 Yes 22 0.73 Yes -22 0.73 Yes 48 81.98 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 242438245 - NM_001271978 STK25 1 0.07 0.13 8 1.35 0 22 6.16 Yes 9 1.65 Yes 0 0 No -21 0.77 Yes 49 94.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242438249 - NM_001271978 STK25 1 0.63 1.19 45 8.36 85.71 18 5.83 Yes 5 1.67 Yes 0 0 No -21 0.73 Yes 53 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 242438804 - NM_001271978 STK25 1 1.52 1.89 55 3.8 80.51 21 5.3 No 40 1.24 Yes 0 0 No -21 0.51 No 49 41.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 242438833 - NM_001271978 STK25 1 0.58 0.71 36 4.14 71.25 24 6.4 Yes 11 1.25 Yes 26 0.83 Yes -23 0.91 Yes 47 86.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 242438925 - NM_001271978 STK25 1 0.26 0.32 21 6.64 76.33 24 5 No 38 -3.46 No 0 0 No -23 0.86 Yes 47 80.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242440335 - NM_001271978 STK25 1 0.24 0.35 18 7.45 93.4 22 4.9 No 69 0.92 Yes 21 0.77 Yes -21 0.55 No 49 40.4 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 242440493 - NM_001271978 STK25 1 0.2 0.28 15 5.3 82.45 16 5.09 No 34 -0.89 No 19 0.4 Yes -21 0.56 No 48 71.03 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 242441215 - NM_001271978 STK25 1 0.12 0.13 9 10.38 89.64 35 6.4 Yes 60 -2.37 No 24 0.35 Yes -34 0.72 Yes 36 55.95 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 131188658 + NM_001042453 STK26 1 6.55 0.44 26 8.91 82.8 50 10.43 Yes 37 0.52 No 40 0.14 Yes -45 0.6 No 25 78.2 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chrX 131187750 + NM_001042453 STK26 1 35.33 2.04 58 6.09 89.36 28 5.1 No 3 0.43 No 0 0 No -27 0.78 Yes 43 85.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 131188658 + NM_001042453 STK26 1 2114.68 120.58 72 8.91 82.8 50 10.43 Yes 37 0.52 No 40 0.14 Yes -45 0.6 No 25 78.2 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chrX 131202111 + NM_001042453 STK26 1 0.62 1.35 51 10.56 80.25 52 6.4 Yes 39 2.03 Yes 0 0 No -29 0.87 Yes 41 79.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 131206993 + NM_001042453 STK26 1 1.69 3.14 69 -0.14 0 12 4.24 No 15 0.96 Yes 27 0.76 Yes -36 0.3 No 43 36.31 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 131206993 + NM_001042453 STK26 1 0.08 0.17 10 -0.14 0 12 4.24 No 15 0.96 Yes 27 0.76 Yes -36 0.3 No 43 36.31 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 131208224 + NM_001042453 STK26 1 0.79 1.6 49 4.3 72.56 31 5.28 No 26 0.44 No 0 0 No -30 0.87 Yes 40 89.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 99468467 - NM_001256313 STK3 1 0.38 0.19 13 6.27 79.73 33 4.96 No 6 0.79 Yes 0 0 No -32 0.71 Yes 38 77.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99469522 - NM_001256313 STK3 1 0.44 0.19 11 9.37 84.06 18 6.48 Yes 5 0.27 No 0 0 No -35 0.68 Yes 35 75.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 99481333 - NM_001256313 STK3 1 2.03 0.88 38 9.59 85.05 32 7.85 Yes 19 1.64 Yes 0 0 No -31 0.95 Yes 39 94.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99541881 - NM_001256313 STK3 1 0.88 0.51 26 6.78 77.47 31 7.91 Yes 29 1.17 Yes 0 0 No -30 0.89 Yes 40 94.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99591372 - NM_001256313 STK3 1 0.74 0.42 22 6.97 88.56 22 6 Yes 9 1.6 Yes 0 0 No -21 0.85 Yes 49 81.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 99607347 - NM_001256313 STK3 1 0.19 0.13 9 6.96 81.37 29 6.66 Yes 68 0.88 Yes 28 0.34 Yes -34 0.56 No 36 41.07 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 99607979 - NM_001256313 STK3 1 0.52 0.4 24 6.11 79.34 33 5.38 No 20 1.71 Yes 32 0.94 Yes -32 0.89 Yes 38 84.67 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 8421695 - NM_030906 STK33 1 0.9 0.21 11 8.85 88.97 32 7.27 Yes 19 1.13 Yes 0 0 No -31 0.87 Yes 39 84.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 8455791 - NM_030906 STK33 1 2.76 0.81 38 3.97 84.41 30 6.19 Yes 17 1.06 Yes 29 0.47 Yes -29 0.52 No 43 59.37 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 8465373 - NM_030906 STK33 1 0.79 0.25 13 2.95 79 27 6.13 Yes 14 0.9 Yes 0 0 No -26 0.74 Yes 44 82.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 8465376 - NM_030906 STK33 1 0.89 0.25 15 7.89 79.91 24 5.89 Yes 11 0.93 Yes 0 0 No -23 0.69 Yes 47 79.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 8485076 - NM_030906 STK33 1 0.39 0.14 9 11.06 86.73 29 4.63 No 53 1.3 Yes 0 0 No -28 0.92 Yes 42 96.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 8492271 - NM_030906 STK33 1 1.3 0.32 17 6.79 74.94 42 7.18 Yes 29 2.64 Yes 0 0 No -41 0.86 Yes 29 96.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219553113 + NM_001243313 STK36 1 3.73 0.57 28 10.8 88.85 38 6.4 Yes 57 0.35 No 20 0.42 Yes -20 0.61 No 50 67.41 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 219554608 + NM_001243313 STK36 1 10.27 0.83 36 5.29 86.14 26 6 Yes 40 1.44 Yes 26 0.57 Yes -52 0.63 No 18 60.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 219557209 + NM_001243313 STK36 1 2.12 0.26 15 10.75 78.08 27 6.32 Yes 14 1.09 Yes 0 0 No -26 0.96 Yes 44 95.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219561764 + NM_001243313 STK36 1 2.86 0.39 20 6.83 94.37 46 8.24 Yes 33 2.32 Yes 0 0 No -45 0.79 Yes 25 92.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219562625 + NM_001243313 STK36 1 3.44 0.5 30 8.13 85.02 36 6.48 Yes 23 0.94 Yes 35 0.72 Yes -35 0.89 Yes 35 89.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 36462415 - NM_007271 STK38 1 6.41 5.06 71 12.39 95.1 23 5.81 Yes 7 0.01 No 0 0 No -25 0.81 Yes 45 87.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 36466281 - NM_007271 STK38 1 0.29 0.19 12 -8 0 13 4.12 No 44 -5.13 No 20 0.37 Yes -52 0.37 No 18 35.67 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 36467829 - NM_007271 STK38 1 0.18 0.15 7 4.98 82.96 19 4.74 No 15 0.91 Yes 0 0 No -18 0.8 Yes 52 83.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36475343 - NM_007271 STK38 1 0.5 0.38 17 7.79 87.75 19 6.72 Yes 6 1.75 Yes 0 0 No -18 0.53 No 44 39.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 36507982 - NM_007271 STK38 1 187.47 32.46 72 7.22 90.27 30 7.63 Yes 17 2.08 Yes 0 0 No -29 0.94 Yes 41 96.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 36509652 - NM_007271 STK38 1 1.42 0.21 12 1.4 83.54 23 4.16 No 75 -5.64 No 0 0 No -22 0.75 Yes 48 88.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 36513063 - NM_007271 STK38 1 6.4 1.18 46 11.23 95.65 35 5.09 No 34 1.11 Yes 0 0 No -34 0.8 Yes 36 81.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27431986 + NM_015000 STK38L 1 0.15 0.13 9 10.44 83.8 23 6.04 Yes 10 1.44 Yes 0 0 No -22 0.84 Yes 48 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27433436 + NM_015000 STK38L 1 0.5 0.36 22 6.01 80.98 26 5.48 No 73 -4.15 No 0 0 No -23 0.69 Yes 47 49.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 27436424 + NM_015000 STK38L 1 0.6 0.47 26 9.34 83.73 35 6.73 Yes 22 0.56 No 0 0 No -34 0.62 No 36 52.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27446481 + NM_015000 STK38L 1 1.91 1.63 43 5.07 70.2 46 7.33 Yes 71 0.91 Yes 0 0 No -39 0.8 Yes 31 89.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27449962 + NM_015000 STK38L 1 2.08 1.78 59 9.65 86.12 33 7.28 Yes 20 0.94 Yes 36 0.74 Yes -32 0.71 Yes 38 64.52 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 27453486 + NM_015000 STK38L 1 8.38 7.72 71 8.18 90.85 34 6.44 Yes 21 0.96 Yes 22 0.88 Yes -22 0.85 Yes 37 70 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 27455073 + NM_015000 STK38L 1 0.7 0.67 30 -2.47 0 26 6.13 Yes 13 0.32 No 0 0 No -33 0.74 Yes 37 77.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 27461273 + NM_015000 STK38L 1 0.11 0.17 10 -14.54 0 31 5.96 Yes 29 0.17 No 0 0 No -30 0.55 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 43595828 + NM_006282 STK4 1 0.13 0.33 17 8.32 81.54 33 6.08 Yes 60 -3.61 No 0 0 No -32 0.78 Yes 38 55.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 43595888 + NM_006282 STK4 1 0.22 0.6 32 5.28 79.44 41 6.22 Yes 10 1.57 Yes 0 0 No -22 0.57 No 48 78.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 43600722 + NM_006282 STK4 1 0.11 0.32 18 1.9 0 40 7.29 Yes 72 0.24 No 0 0 No -33 0.58 No 23 40.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 43601825 + NM_006282 STK4 1 0.06 0.17 10 5.03 80.54 24 5.17 No 52 1.17 Yes 24 0.49 Yes -23 0.87 Yes 47 93.13 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 43601923 + NM_006282 STK4 1 0.44 1.32 36 -16.29 44.01 48 6.59 Yes 10 0.38 No 23 0.54 Yes -45 0.72 Yes 25 89.28 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 43601941 + NM_006282 STK4 1 0.55 1.71 52 1.32 74.79 17 4.98 No 4 0.43 No 23 0.54 Yes -16 0.56 No 47 70.28 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 43601967 + NM_006282 STK4 1 0.31 0.94 40 0.44 80.58 29 5.92 Yes 30 0.39 No 0 0 No -29 0.54 No 41 75.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 43602740 + NM_006282 STK4 1 0.06 0.19 12 7.57 86.91 56 8.01 Yes 43 0.45 No 26 0.84 Yes -26 0.68 Yes 44 85.01 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 43603888 + NM_006282 STK4 1 0.06 0.18 12 9.04 88.92 30 4.42 No 9 0.81 Yes 0 0 No -25 0.88 Yes 45 91.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43603964 + NM_006282 STK4 1 2.52 7.58 69 10.72 84.16 25 7.12 Yes 12 2.2 Yes 0 0 No -24 0.86 Yes 46 87.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43614013 + NM_006282 STK4 1 0.02 0.11 7 0.6 0 43 6.47 Yes 30 1.4 Yes 0 0 No -25 0.74 Yes 45 75.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43615779 + NM_006282 STK4 1 0.31 1.46 50 0.37 0 10 4 No 63 1.18 Yes 0 0 No -38 0.61 No 32 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 43616301 + NM_006282 STK4 1 0.03 0.17 10 9.46 88.15 24 4.22 No 1 0.75 No 0 0 No -23 0.55 No 47 56.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 43625778 + NM_006282 STK4 1 0.02 0.13 7 8.05 93.46 17 4.7 No 4 0.34 No 36 0.66 Yes -27 0.77 Yes 43 71.81 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 43629009 + NM_006282 STK4 1 0.07 0.31 19 4.29 76.42 21 5.53 No 0 -0.76 No 25 0.54 Yes -20 0.56 No 50 79.21 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 43646253 + NM_006282 STK4 1 0.06 0.24 14 6.98 85.25 17 5.31 No 4 1.08 Yes 0 0 No -22 0.55 No 39 39.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 43653617 + NM_006282 STK4 1 0.26 1.11 43 0.23 0 51 6.76 Yes 43 0.67 No 0 0 No -29 0.75 Yes 41 73.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 43677010 + NM_006282 STK4 1 0.03 0.15 9 6.1 71.24 28 6.11 Yes -4 0.63 No 0 0 No -31 0.46 No 39 73.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 43681726 + NM_006282 STK4 1 1.76 8.17 71 11.73 93.21 28 5.31 No 39 0.94 Yes 27 0.49 Yes -28 0.61 No 42 57.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 36807569 - NM_032017 STK40 1 0.79 0.81 37 -4.63 0 11 3.87 No 39 0.62 No 0 0 No -51 0.9 Yes 19 90.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36823873 - NM_032017 STK40 1 0.19 0.21 12 7.69 82.67 26 6.24 Yes 13 1.56 Yes 0 0 No -25 0.96 Yes 45 96.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36824439 - NM_032017 STK40 1 2.52 3.1 67 -11.7 0 17 4.12 No 64 -4.32 No 32 0.45 Yes -32 0.56 No 62 25.48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 36838376 - NM_032017 STK40 1 2.04 0.54 28 4.97 87.03 20 4.68 No 7 2.15 Yes 19 0.91 Yes -19 0.93 Yes 51 91.27 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 36839210 - NM_032017 STK40 1 0.52 0.14 10 6.96 78.85 27 6.49 Yes 14 1.85 Yes 0 0 No -26 0.81 Yes 44 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26230230 - NM_001145454 STMN1 1 0.1 0.74 33 0.79 66.97 23 4.79 No 10 1.13 Yes 0 0 No -22 0.61 No 48 51.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 26230297 - NM_001145454 STMN1 1 0.06 0.54 29 -1.77 0 17 3.95 No 68 -2.46 No 0 0 No -32 0.45 No 38 38.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 26230303 - NM_001145454 STMN1 1 0.03 0.21 14 -16.69 0 27 6.44 Yes 62 -2.46 No 0 0 No -26 0.62 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 105647487 - NM_024928 STN1 1 0.65 0.38 22 7.7 77.5 21 5.83 Yes 8 0.88 Yes 0 0 No -20 0.79 Yes 50 73.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105658136 - NM_024928 STN1 1 2.52 1.85 57 8.21 90.02 18 5.44 No 16 0.4 No 28 0.94 Yes -28 0.91 Yes 42 93 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 74277210 - NM_001324230 STOML1 1 79.57 7.17 71 3.38 74.63 48 6.79 Yes 35 1.97 Yes 21 0.64 Yes -47 0.85 Yes 23 83.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 74280488 - NM_001324230 STOML1 1 1.55 0.35 19 7.05 79.95 26 7.06 Yes 13 0.7 No 0 0 No -34 0.74 Yes 45 64.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 61782269 - NM_001003786 STRADA 1 3.54 2.82 64 11.92 84.77 19 5.97 Yes 6 1.93 Yes 0 0 No -23 0.59 No 47 75.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 61784091 - NM_001003786 STRADA 1 0.93 0.72 32 -1.15 0 12 4.24 No 24 0.72 No 0 0 No -36 0.8 Yes 34 82.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 61789906 - NM_001003786 STRADA 1 0.12 0.18 10 6.53 86.16 20 5.12 No 7 1.27 Yes 0 0 No -23 0.6 No 47 78.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 202319471 + NM_001206864 STRADB 1 3.42 0.33 20 5.91 86.11 30 7.11 Yes 17 0.94 Yes 0 0 No -29 0.64 No 41 52.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 202322101 + NM_001206864 STRADB 1 1.38 0.5 26 7.81 81.1 48 7.06 Yes 5 0.06 No 23 0.69 Yes -35 0.58 No 35 60.49 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 202339373 + NM_001206864 STRADB 1 0.51 0.22 10 -1.79 0 35 7.16 Yes 22 0.5 No 0 0 No -34 0.7 Yes 36 55.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 16036016 + NM_007178 STRAP 1 0.24 1.08 39 5.52 84.82 42 6.83 Yes 29 1.18 Yes 27 0.88 Yes -27 0.85 Yes 43 86.08 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 16051746 + NM_007178 STRAP 1 0.03 0.14 8 10.34 82.83 33 5.45 No 20 0.75 No 0 0 No -33 0.64 No 37 77.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 16053883 + NM_007178 STRAP 1 0.28 1.81 59 -0.69 80.04 29 5.46 No 16 0.74 No 0 0 No -28 0.54 No 42 70.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 16054442 + NM_007178 STRAP 1 0.03 0.15 7 7.85 88.36 24 5.29 No 11 0.56 No 0 0 No -23 0.85 Yes 47 87.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 16055853 + NM_007178 STRAP 1 0.69 3.19 66 -0.04 74.63 42 7.07 Yes 29 1.92 Yes 0 0 No -41 0.6 No 29 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 125884606 - NM_018387 STRBP 1 1.2 3.6 65 9.41 90.59 43 8.08 Yes 30 1.26 Yes 31 0.34 Yes -31 0.4 No 39 41.89 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 125885493 - NM_018387 STRBP 1 0.07 0.19 13 11.76 86.85 40 6.22 Yes 27 1.08 Yes 0 0 No -39 0.92 Yes 31 92.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 125898813 - NM_018387 STRBP 1 0.03 0.13 8 6.61 76.47 34 4.17 No 13 0.78 Yes 20 0.46 Yes -33 0.26 No 45 37.75 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 125930538 - NM_018387 STRBP 1 0.37 0.75 44 6.83 86.23 23 5.07 No 62 0.45 No 23 0.84 Yes -23 0.56 No 47 35.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 125935441 - NM_018387 STRBP 1 0.09 0.29 14 2.18 63.44 59 8.13 Yes 46 0.98 Yes 0 0 No -58 0.58 No 12 61.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 125936136 - NM_018387 STRBP 1 0.04 0.13 8 -1.83 0 16 4.43 No 66 -5.68 No 23 0.77 Yes -15 0.45 No 55 47.18 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 125943255 - NM_018387 STRBP 1 0.09 0.18 9 4.87 74.37 20 6.04 Yes 28 0.66 No 30 0.46 Yes -36 0.31 No 34 50.36 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 125976198 - NM_018387 STRBP 1 0.32 0.15 11 4.74 84.41 25 5.92 Yes 12 1.18 Yes 34 0.35 Yes -24 0.88 Yes 46 90.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 125976198 - NM_018387 STRBP 1 0.35 0.17 11 4.74 84.41 25 5.92 Yes 12 1.18 Yes 34 0.35 Yes -24 0.88 Yes 46 90.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 125998420 - NM_018387 STRBP 1 0.59 0.24 14 5.95 84.51 29 5.83 Yes 63 0.62 No 0 0 No -28 0.93 Yes 42 94.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 110583262 + NM_001270768 STRIP1 1 0.47 0.24 15 -3.91 0 13 2.72 No 40 0.58 No 0 0 No -26 0.73 Yes 44 87.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 110586940 + NM_001270768 STRIP1 1 0.61 0.28 16 5.28 81.72 20 5.92 Yes 66 -3.97 No 0 0 No -22 0.68 Yes 48 75.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 110590079 + NM_001270768 STRIP1 1 0.33 0.19 12 6.08 87.8 29 7.59 Yes 16 0.36 No 0 0 No -28 0.89 Yes 42 82.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 129091875 + NM_001134336 STRIP2 1 3.59 0.21 11 0.49 62.44 52 7.48 Yes 66 -1.69 No 0 0 No -21 0.34 No 19 82.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 37076775 - NM_003162 STRN 1 0.13 0.1 7 2.33 0 32 7.83 Yes 19 1.28 Yes 32 0.72 Yes -31 0.62 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 37078248 - NM_003162 STRN 1 0.78 0.76 34 5.12 91.06 36 5.09 No 23 1.23 Yes 0 0 No -35 0.6 No 35 86.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 37107952 - NM_003162 STRN 1 0.19 0.15 9 7.92 74.83 30 6.22 Yes 72 0.64 No 0 0 No -25 0.7 Yes 45 90.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 37111148 - NM_003162 STRN 1 1.03 0.56 27 7.78 88.24 36 5.59 Yes 8 0.78 Yes 0 0 No -20 0.74 Yes 50 83.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 37111750 - NM_003162 STRN 1 7.38 3.75 70 4.39 77.18 34 6.32 Yes 21 0.24 No 0 0 No -17 0.46 No 39 44.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 37112456 - NM_003162 STRN 1 0.4 0.21 12 10.43 89.82 26 5.74 Yes 2 0.94 Yes 0 0 No -25 0.64 No 45 75.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 37125644 - NM_003162 STRN 1 0.33 0.14 8 1.14 80.73 34 6.66 Yes 21 1.96 Yes 0 0 No -33 0.8 Yes 37 73.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 37129911 - NM_003162 STRN 1 0.41 0.24 14 0.52 65.66 25 5 No -3 0.44 No 25 0.79 Yes -24 0.8 Yes 46 58.77 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 37143543 - NM_003162 STRN 1 0.13 0.1 7 7.03 94.73 25 5.41 No 3 0.54 No 0 0 No -22 0.8 Yes 48 87.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 31364814 - NM_001083893 STRN3 1 0.32 0.13 8 -1.03 0 17 4.08 No 66 1.2 Yes 29 0.84 Yes -19 0.85 Yes 51 76.25 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 31374763 - NM_001083893 STRN3 1 0.23 0.17 9 -1.87 67.96 45 7.36 Yes 32 0.75 No 0 0 No -30 0.56 No 40 51.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31386226 - NM_001083893 STRN3 1 1.98 0.17 9 8.78 87.77 24 4.98 No 19 0.35 No 0 0 No -24 0.65 No 46 57.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31401446 - NM_001083893 STRN3 1 0.93 0.11 8 3.1 84.79 15 4.51 No 2 1.51 Yes 0 0 No -26 0.68 Yes 21 66.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 31401470 - NM_001083893 STRN3 1 3.61 0.25 16 4.02 83.28 26 5.66 Yes 13 0.18 No 0 0 No -25 0.61 No 45 78.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 31408534 - NM_001083893 STRN3 1 0.39 0.26 15 10.24 87.19 31 5.89 Yes 18 1.96 Yes 0 0 No -30 0.52 No 40 73.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 31420148 - NM_001083893 STRN3 1 0.27 0.26 12 2.28 75.77 38 5.98 Yes 16 0.63 No 0 0 No -28 0.37 No 42 42.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 31422449 - NM_001083893 STRN3 1 0.26 0.24 16 11.03 88.34 25 6.55 Yes 12 1.18 Yes 0 0 No -24 0.7 Yes 46 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47224062 - NM_001039877 STRN4 1 0.11 0.14 9 -13.36 0 15 4.12 No 63 0.45 No 31 0.82 Yes -14 0.83 Yes 56 49.48 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 47225325 - NM_001039877 STRN4 1 0.09 0.11 8 -4.11 0 26 6.71 Yes 53 -1.11 No 0 0 No -27 0.51 No 45 47.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 47225397 - NM_001039877 STRN4 1 0.14 0.15 9 2.6 0 20 4.58 No NA NA NA 0 0 No -43 0.27 No 46 43.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 47228657 - NM_001039877 STRN4 1 0.41 0.43 21 -5.46 0 12 4.24 No 58 -4.8 No 27 0.85 Yes -7 0.56 No 49 37.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 47230804 - NM_001039877 STRN4 1 427.93 60.35 72 7.74 85.34 27 5.47 No 60 0.98 Yes 26 0.81 Yes -26 0.6 No 47 63.71 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 47230949 - NM_001039877 STRN4 1 10.52 1.57 50 12.53 88.61 74 8.66 Yes NA NA NA 28 0.5 Yes -28 0.61 No 41 40.7 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 47231384 - NM_001039877 STRN4 1 1.46 1.18 45 10.63 83.46 38 6.38 Yes 57 1.74 Yes 37 0.53 Yes -37 0.6 No 33 66.34 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 47236530 - NM_001039877 STRN4 1 0.13 0.14 7 -12.94 0 12 4.12 No 71 -5.94 No 26 0.97 Yes -51 0.54 No 19 39.83 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 47237133 - NM_001039877 STRN4 1 4.21 4.08 68 9.52 85.86 40 7.81 Yes 27 1.22 Yes 39 0.6 Yes -39 0.93 Yes 31 92.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 47239526 - NM_001039877 STRN4 1 0.39 0.4 25 1.28 0 36 7.09 Yes 23 1.01 Yes 30 0.62 Yes -36 0.78 Yes 34 81.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 47239760 - NM_001039877 STRN4 1 1.5 1.44 52 12.17 88.27 39 6.32 Yes 74 1.27 Yes 0 0 No -33 0.5 No 48 73.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 47240181 - NM_001039877 STRN4 1 0.09 0.1 7 -2.89 0 12 5.2 No -1 0.77 Yes 28 0.83 Yes -11 0.45 No 59 67.68 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 7181294 + NM_001320754 STS 1 0.35 0.11 8 5.24 80.12 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.71 Yes 51 88.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 7199463 + NM_001320754 STS 1 0.38 0.14 10 11.68 91.86 33 4.63 No 11 1.8 Yes 0 0 No -23 0.87 Yes 47 81.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 7234017 + NM_001320754 STS 1 0.58 0.24 14 3.23 81.08 24 5.84 Yes -2 0.57 No 0 0 No -23 0.82 Yes 47 88.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 125463944 + NM_001278503 STT3A 1 5.48 0.54 28 7.67 88.67 36 7.12 Yes 45 0.59 No 0 0 No -35 0.65 No 48 48.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 125464695 + NM_001278503 STT3A 1 2.69 0.28 15 11.57 85.23 32 5.92 Yes 54 1.06 Yes 0 0 No -31 0.76 Yes 39 60.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 125463944 + NM_001278503 STT3A 1 1.08 0.15 10 7.67 88.67 36 7.12 Yes 45 0.59 No 0 0 No -35 0.65 No 48 48.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 125464695 + NM_001278503 STT3A 1 1.3 0.13 7 11.57 85.23 32 5.92 Yes 54 1.06 Yes 0 0 No -31 0.76 Yes 39 60.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 125469331 + NM_001278503 STT3A 1 0.05 0.24 15 7.38 88.17 34 7.01 Yes 34 0.65 No 0 0 No -33 0.93 Yes 37 95.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 125479604 + NM_001278503 STT3A 1 0.59 2.57 62 4.66 78.15 46 7.87 Yes 33 1.5 Yes 23 0.11 Yes -45 0.95 Yes 25 95.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 125481192 + NM_001278503 STT3A 1 0.07 0.29 19 10.06 85.92 14 6.7 Yes 55 1.23 Yes 0 0 No -24 0.53 No 38 47.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 125488269 + NM_001278503 STT3A 1 0.05 0.26 16 -8.69 0 35 5.83 Yes 50 2.19 Yes 0 0 No -30 0.73 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 125491300 + NM_001278503 STT3A 1 0.13 0.44 24 8.26 83.83 19 7.58 Yes 6 0.89 Yes 18 0.71 Yes -32 0.57 No 38 80.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 31575050 + NM_178862 STT3B 1 0.1 0.22 13 3.05 58.21 18 5.48 No 39 -0.94 No 0 0 No -24 0.34 No 53 49.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 31578789 + NM_178862 STT3B 1 0.15 0.35 19 12.57 88.58 30 6 Yes 17 0.18 No 0 0 No -21 0.71 Yes 49 67.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 31656640 + NM_178862 STT3B 1 0.18 0.64 30 5.38 82.19 16 6.72 Yes 64 0.72 No 0 0 No -27 0.89 Yes 43 91.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 31661456 + NM_178862 STT3B 1 1.23 3.06 61 8.42 87.98 25 5.64 Yes 53 0.35 No 30 0.69 Yes -30 0.91 Yes 40 89.69 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 31668607 + NM_178862 STT3B 1 0.06 0.29 17 7.81 92.11 31 6.73 Yes 30 1.23 Yes 0 0 No -30 0.92 Yes 40 95.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 31670813 + NM_178862 STT3B 1 0.03 0.17 10 8.96 93.25 18 5.29 No 5 0.87 Yes 0 0 No -23 0.43 No 53 35.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 31674448 + NM_178862 STT3B 1 0.03 0.17 7 5.74 83.83 26 5.55 No 58 1.22 Yes 0 0 No -24 0.68 Yes 46 56.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 13256402 - NM_001271610 STX10 1 0.65 0.67 37 10.13 88.62 38 6.56 Yes 74 0.4 No 0 0 No -23 0.5 No 47 62.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 13260419 - NM_001271610 STX10 1 0.3 0.25 15 -13.25 0 29 6.18 Yes -3 1.71 Yes 26 0.39 Yes -9 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 13260778 - NM_001271610 STX10 1 0.36 0.15 8 6.4 81.86 19 5.74 Yes NA NA NA 0 0 No -18 0.37 No 44 63.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 144472232 + NM_003764 STX11 1 0.86 0.53 26 6.39 78.37 18 5.49 No 5 0.67 No 0 0 No -23 0.67 Yes 36 54.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 144472235 + NM_003764 STX11 1 0.28 0.22 14 5.73 82.2 21 5.69 Yes 8 0.65 No 0 0 No -26 0.62 No 33 61.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 144489676 + NM_003764 STX11 1 4.95 3.19 68 7.57 85 27 5.38 No -1 1.32 Yes 0 0 No -26 0.7 Yes 44 69.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28119820 + NM_177424 STX12 1 0.4 0.39 20 6.62 88.07 27 6.08 Yes 44 1.49 Yes 0 0 No -26 0.66 Yes 44 48.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 28127572 + NM_177424 STX12 1 0.18 0.21 12 10.05 96.82 22 6 Yes 52 0.88 Yes 0 0 No -21 0.9 Yes 49 92.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28131401 + NM_177424 STX12 1 0.22 0.18 10 4.14 84.38 20 4.55 No 27 0.62 No 0 0 No -25 0.83 Yes 45 82.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 28131486 + NM_177424 STX12 1 0.41 0.4 21 2.1 86.02 12 4.8 No 57 1.5 Yes 0 0 No -24 0.82 Yes 46 54.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 28138502 + NM_177424 STX12 1 0.2 0.18 11 4.79 74.3 27 5.74 Yes 14 1.04 Yes 26 0.87 Yes -26 0.81 Yes 44 90.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 28146406 + NM_177424 STX12 1 0.61 0.5 24 12.31 93.5 18 5.52 No 28 0.49 No 0 0 No -23 0.79 Yes 47 85.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 57235371 + NR_037945 STX16-NPEPL1 1 0.55 0.13 7 10.43 84.84 27 6.88 Yes 14 1.39 Yes 0 0 No -26 0.87 Yes 44 89.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 57242256 + NR_037945 STX16-NPEPL1 1 1.69 0.54 29 6.33 79.66 24 6.5 Yes 11 1.39 Yes 0 0 No -23 0.84 Yes 47 85.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 57242856 + NR_037945 STX16-NPEPL1 1 0.08 0.14 9 3.34 74.8 17 5.2 No 57 0.17 No 0 0 No -28 0.59 No 42 42.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 57284092 + NR_037945 STX16-NPEPL1 1 1.15 0.36 24 6.76 90.41 23 4.02 No 10 0.76 No 0 0 No -22 0.88 Yes 48 90.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 102676271 + NM_017919 STX17 1 2.35 0.68 34 9.63 88.27 30 8.64 Yes 17 1.34 Yes 29 0.84 Yes -29 0.84 Yes 41 91.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 102678330 + NM_017919 STX17 1 0.45 0.42 22 7.78 86.05 18 5.29 No 5 1.75 Yes 21 0.71 Yes -18 0.67 Yes 49 70.64 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 102684483 + NM_017919 STX17 1 1.63 1.5 49 11.86 92.72 32 6.65 Yes 19 1.49 Yes 0 0 No -31 0.7 Yes 39 86.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 102708000 + NM_017919 STX17 1 0.3 0.36 23 9.79 85.31 41 9.33 Yes 28 1.55 Yes 25 0.6 Yes -25 0.55 No 45 49.5 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 102714355 + NM_017919 STX17 1 0.43 0.31 18 11.42 93.23 33 7.26 Yes 20 1.19 Yes 0 0 No -33 0.43 No 38 55.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 102716275 + NM_017919 STX17 1 0.62 0.44 23 8.67 83.55 14 5.85 Yes 1 1.03 Yes 33 0.41 Yes -33 0.42 No 41 52.19 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 102719961 + NM_017919 STX17 1 0.25 0.18 12 4.19 0 34 6.52 Yes 51 0.52 No 0 0 No -38 0.63 No 37 74.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 102720910 + NM_017919 STX17 1 0.16 0.11 7 5.39 81.54 21 4.69 No 8 1.82 Yes 0 0 No -20 0.88 Yes 50 94.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 102721765 + NM_017919 STX17 1 0.74 0.57 27 4.09 0 32 7.35 Yes 19 0.64 No 0 0 No -34 0.31 No 40 57.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 102722432 + NM_017919 STX17 1 0.45 0.4 25 7.41 78.38 16 6.14 Yes 3 2.04 Yes 0 0 No -19 0.44 No 39 65.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 102723834 + NM_017919 STX17 1 0.15 0.11 7 10.5 95.29 25 7.21 Yes 12 1.14 Yes 0 0 No -24 0.73 Yes 46 75.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 4425934 - NM_001346300 STX18 1 0.13 0.13 8 9.45 81.71 29 5.66 Yes 16 0.42 No 0 0 No -28 0.88 Yes 42 74.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 4439345 - NM_001346300 STX18 1 0.9 1.03 40 9.85 90.85 16 5.61 Yes 3 1.51 Yes 0 0 No -31 0.89 Yes 39 84.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 4455401 - NM_001346300 STX18 1 0.46 0.65 35 7.9 90.22 36 7.01 Yes 70 0.61 No 0 0 No -28 0.6 No 42 78.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 4552235 + NR_037888 STX18-AS1 1 13.04 0.46 28 -1.87 66.34 27 7.58 Yes 52 1.05 Yes 0 0 No -26 0.68 Yes 27 53.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 4552238 + NR_037888 STX18-AS1 1 4.35 0.14 9 -2.77 57.74 30 7.77 Yes 55 1.06 Yes 0 0 No -29 0.61 No 24 55.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 4552321 + NR_037888 STX18-AS1 1 7.9 0.28 17 7.22 90.36 20 5.86 Yes 63 0.92 Yes 0 0 No -24 0.59 No 47 63.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 4555561 + NR_037888 STX18-AS1 1 1.8 0.1 7 6.41 88.21 35 9.13 Yes 22 1.61 Yes 0 0 No -34 0.72 Yes 36 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 4562120 + NR_037888 STX18-AS1 1 14.07 0.54 31 12.43 88.05 35 6.4 Yes 22 0 No 34 0.62 Yes -34 0.56 No 36 67.51 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 4570633 + NR_037888 STX18-AS1 1 7.95 0.33 18 6.19 81.24 23 5.67 Yes 10 0.25 No 0 0 No -22 0.79 Yes 48 85.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 4580120 + NR_037888 STX18-AS1 1 5.55 0.19 12 5.18 82.91 24 6.24 Yes 11 1.17 Yes 0 0 No -23 0.93 Yes 47 89.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 4580442 + NR_037888 STX18-AS1 1 8.5 0.38 22 9.21 93.86 26 4.71 No 18 0.88 Yes 0 0 No -30 0.72 Yes 40 85.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 4587369 + NR_037888 STX18-AS1 1 11.56 0.39 22 6.03 81.66 20 6.86 Yes 7 0.93 Yes 0 0 No -19 0.47 No 51 50.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 4607164 + NR_037888 STX18-AS1 1 2.72 0.11 7 4.46 87.77 27 5.2 No 43 1.68 Yes 0 0 No -55 0.7 Yes 15 78.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 4613220 + NR_037888 STX18-AS1 1 17.05 0.69 35 11.47 95.07 24 6.08 Yes 11 1.35 Yes 0 0 No -23 0.95 Yes 47 95.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 4638452 + NR_037888 STX18-AS1 1 2.63 0.13 8 7.98 70.39 26 5.23 No 0 0.43 No 0 0 No -26 0.62 No 44 63.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 131276462 - NM_194356 STX2 1 22.4 1.96 62 1.78 64.73 56 6.48 Yes 70 1.1 Yes 0 0 No -34 0.64 No 36 47.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 131276462 - NM_194356 STX2 1 7.46 0.69 32 1.78 64.73 56 6.48 Yes 70 1.1 Yes 0 0 No -34 0.64 No 36 47.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 131282460 - NM_194356 STX2 1 1.5 0.14 9 8.25 86.25 29 4.2 No 8 0.73 No 0 0 No -28 0.7 Yes 46 75.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 131289086 - NM_194356 STX2 1 7.73 1.29 43 2 89.27 24 5.1 No 11 0.22 No 0 0 No -23 0.92 Yes 47 85.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 131289089 - NM_194356 STX2 1 27.36 4.88 66 2.35 90.13 21 4.8 No 8 0.22 No 0 0 No -20 0.91 Yes 50 89.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 131294623 - NM_194356 STX2 1 0.55 0.15 9 10.13 91.03 44 4.78 No 36 0.33 No 0 0 No -29 0.53 No 34 64.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 131295483 - NM_194356 STX2 1 0.67 0.18 12 6.95 81.33 17 4.2 No 0 0.1 No 0 0 No -16 0.76 Yes 54 75.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 131296989 - NM_194356 STX2 1 2.26 0.63 25 5.26 91.49 24 5.43 No 58 0.06 No 28 0.54 Yes -21 0.32 No 42 31.54 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 131305208 - NM_194356 STX2 1 0.57 0.22 12 2.4 84.41 25 5.69 Yes 43 1.13 Yes 0 0 No -24 0.67 Yes 46 74.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 131306954 - NM_194356 STX2 1 0.67 0.18 9 2.56 0 36 3.51 No 31 0.33 No 0 0 No -29 0.39 No 38 48.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 131308239 - NM_194356 STX2 1 1.23 0.29 13 6.43 73.74 55 7.14 Yes 73 1.18 Yes 0 0 No -27 0.89 Yes 43 85.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31045524 + NM_001272095 STX4 1 5.77 5.44 70 7.73 86.57 14 5.29 No 74 -0.6 No 21 0.41 Yes -21 0.82 Yes 49 83.02 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 31046296 + NM_001272095 STX4 1 0.14 0.19 12 1.09 0 11 3.87 No 73 0.14 No 0 0 No -29 0.38 No 42 55.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31051046 + NM_001272095 STX4 1 1.2 1.08 46 1.22 71.63 23 6.9 Yes 10 2.48 Yes 0 0 No -31 0.61 No 39 80.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 31051092 + NM_001272095 STX4 1 0.12 0.13 8 5.8 74.52 38 7.09 Yes 56 2.49 Yes 0 0 No -37 0.76 Yes 33 63.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 31051095 + NM_001272095 STX4 1 0.26 0.24 15 6.01 81.06 41 7.29 Yes 59 2.49 Yes 0 0 No -40 0.57 No 30 57.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 62597993 - NM_001244666 STX5 1 0.28 0.28 15 9.07 81 28 5.83 Yes 39 0.76 No 27 0.72 Yes -27 0.45 No 19 58.39 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 62598583 - NM_001244666 STX5 1 7.25 1.44 48 8.31 80.88 25 5.92 Yes 59 0.12 No 28 0.71 Yes -22 0.78 Yes 48 76.27 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 180945539 - NM_005819 STX6 1 0.57 0.61 30 5.49 81.22 48 10.62 Yes 35 1.96 Yes 0 0 No -20 0.84 Yes 50 84.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180945714 - NM_005819 STX6 1 0.16 0.21 14 9.15 75.26 14 6.24 Yes 1 1.37 Yes 0 0 No -32 0.72 Yes 38 81.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180952066 - NM_005819 STX6 1 0.1 0.13 7 12.63 90.36 21 5.57 Yes 8 0.23 No 0 0 No -24 0.48 No 44 68.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 180957232 - NM_005819 STX6 1 0.15 0.14 9 10.46 90.97 29 5.6 Yes 16 0.2 No 28 0.9 Yes -28 0.9 Yes 42 96.36 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 180971841 - NM_005819 STX6 1 0.46 0.67 37 -8.96 0 30 5.52 No -2 1.26 Yes 20 0.8 Yes -16 0.33 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 132783000 - NM_001326578 STX7 1 2.89 6.35 72 0.65 77.74 38 5.08 No 66 0.02 No 22 0.76 Yes -22 0.57 No 48 68.52 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 132783560 - NM_001326578 STX7 1 0.16 0.32 21 5.01 79.7 24 5.98 Yes 70 0.48 No 0 0 No -23 0.61 No 47 68.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 132791761 - NM_001326578 STX7 1 0.13 0.21 11 -0.15 0 58 7.58 Yes 45 1.32 Yes 0 0 No -57 0.67 Yes 13 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 9153986 - NM_004853 STX8 1 0.3 0.31 20 -5.77 58.3 12 5 No 19 1.13 Yes 22 0.38 Yes -41 0.93 Yes 29 70.19 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 9177627 - NM_004853 STX8 1 0.58 0.58 27 7.71 99.43 21 5.1 No 59 0.51 No 0 0 No -20 0.54 No 50 47.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 9280172 - NM_004853 STX8 1 0.12 0.13 7 6.51 90.36 33 6.08 Yes 75 0.1 No 0 0 No -30 0.37 No 47 50.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 9280245 - NM_004853 STX8 1 0.12 0.11 7 6.93 85.91 44 5.9 Yes 31 0.9 Yes 0 0 No -31 0.76 Yes 39 71.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 9281969 - NM_004853 STX8 1 0.39 0.36 21 -2.54 80.94 25 5.79 Yes 12 0.48 No 0 0 No -24 0.74 Yes 46 79.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 9294605 - NM_004853 STX8 1 0.18 0.14 9 4.31 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -27 0.37 No 54 58.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 9300029 - NM_004853 STX8 1 0.51 0.4 19 12.5 95.65 29 5.39 No 43 0.83 Yes 0 0 No -24 0.46 No 46 57.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 9325361 - NM_004853 STX8 1 0.13 0.11 7 6.15 86.22 36 4.7 No 26 -3.23 No 0 0 No -20 0.92 Yes 50 83.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 9341205 - NM_004853 STX8 1 0.78 0.64 29 8.66 85.77 26 5.2 No 13 0.78 Yes 0 0 No -20 0.66 No 50 79.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 9395234 - NM_004853 STX8 1 0.36 0.36 16 5.86 0 29 6.27 Yes 16 0.56 No 0 0 No -28 0.69 Yes 42 55.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 9403581 - NM_004853 STX8 1 0.13 0.14 8 9.57 92.4 26 9.35 Yes 48 1.62 Yes 0 0 No -25 0.97 Yes 45 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 9448593 - NM_004853 STX8 1 0.1 0.11 7 -7.4 0 11 4 No 70 -2.49 No 0 0 No -22 0.68 Yes 48 63.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 9456541 - NM_004853 STX8 1 0.14 0.17 10 7.81 79.16 15 4.97 No 2 1.08 Yes 0 0 No -24 0.7 Yes 46 68.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 9473260 - NM_004853 STX8 1 0.89 0.54 21 3.07 83 37 5.06 No 25 0.51 No 37 0.56 Yes -37 0.74 Yes 33 90.16 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 7706616 + NM_001272034 STXBP2 1 0.21 0.39 22 7.21 78.4 29 5.47 No NA NA NA 0 0 No -32 0.28 No 38 63.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 7709467 + NM_001272034 STXBP2 1 0.23 0.47 23 5.43 67.95 22 7.63 Yes -4 1.28 Yes 22 0.67 Yes -23 0.51 No 49 45.47 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 7709764 + NM_001272034 STXBP2 1 1.07 1.81 56 3.22 72.61 24 6.89 Yes 2 0.38 No 23 0.97 Yes -23 0.95 Yes 47 92.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 7710645 + NM_001272034 STXBP2 1 0.41 0.5 24 10.83 88.28 43 7 Yes 41 1.03 Yes 0 0 No -42 0.87 Yes 28 91.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7711057 + NM_001272034 STXBP2 1 0.23 0.29 16 4.24 76.3 95 13.91 Yes NA NA NA 30 0.6 Yes -30 0.45 No 32 60.4 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 109299317 + NM_007269 STXBP3 1 0.14 0.22 15 2.3 0 9 3.87 No 11 1.49 Yes 0 0 No -31 0.43 No 39 60.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 109301138 + NM_007269 STXBP3 1 0.27 0.24 15 1.16 0 10 3.76 No 7 2 Yes 0 0 No -26 0.88 Yes 44 82.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109325042 + NM_007269 STXBP3 1 0.21 0.21 13 -11.53 0 21 5.2 No 53 0.16 No 21 0.71 Yes -20 0.76 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 109350243 + NM_007269 STXBP3 1 2.03 2.49 68 9.53 91.28 22 5.26 No 57 1.36 Yes 0 0 No -21 0.7 Yes 49 67.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 53076986 + NM_178509 STXBP4 1 17.55 2.63 15 3.18 82.96 13 4.17 No 53 0.68 No 20 0.68 Yes -20 0.55 No 50 75.38 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 53108552 + NM_178509 STXBP4 1 0.43 0.15 9 3.64 79.6 19 5.57 Yes 6 0.91 Yes 0 0 No -28 0.47 No 44 39.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 53109981 + NM_178509 STXBP4 1 0.33 0.1 7 5.27 78.64 33 6.36 Yes 75 0.79 Yes 0 0 No -28 0.74 Yes 42 76.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 53120618 + NM_178509 STXBP4 1 1.2 0.29 19 7.59 86.98 27 5.57 Yes 46 1.35 Yes 0 0 No -26 0.65 No 44 69.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 53120972 + NM_178509 STXBP4 1 11.38 2.65 67 8.06 78.69 25 4.98 No 37 1.47 Yes 24 0.93 Yes -24 0.93 Yes 46 90.88 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 53153096 + NM_178509 STXBP4 1 0.78 0.14 9 4.3 81.36 22 4.67 No 50 2.59 Yes 0 0 No -22 0.63 No 48 65.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 53177257 + NM_178509 STXBP4 1 1.41 0.19 10 4.47 79.57 22 5.36 No 19 0.98 Yes 0 0 No -21 0.69 Yes 49 57.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 53177275 + NM_178509 STXBP4 1 1.14 0.17 10 6.84 90.5 16 5.19 No 37 0.99 Yes 0 0 No -21 0.21 No 45 32.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 53207544 + NM_178509 STXBP4 1 2.47 0.39 20 5.68 78.97 25 7.96 Yes 1 0.09 No 0 0 No -24 0.86 Yes 46 91.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 53229424 + NM_178509 STXBP4 1 0.86 0.13 9 6.7 76.56 69 6.13 Yes 22 0.37 No 0 0 No -22 0.54 No 48 49.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 53231646 + NM_178509 STXBP4 1 1.84 0.29 15 8.9 91.48 31 6.41 Yes 32 1.12 Yes 0 0 No -27 0.41 No 43 51.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 53233102 + NM_178509 STXBP4 1 1.22 0.17 9 9.02 98.09 20 6.53 Yes 7 0.81 Yes 0 0 No -23 0.84 Yes 47 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 147564744 + NM_139244 STXBP5 1 0.38 0.13 9 8.7 93.7 14 4.82 No 74 1.43 Yes 0 0 No -27 0.44 No 43 51.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 147566149 + NM_139244 STXBP5 1 3.25 1.17 50 10.73 88.27 33 6.24 Yes 20 1.9 Yes 0 0 No -32 0.73 Yes 38 91.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 147613386 + NM_139244 STXBP5 1 0.5 0.19 12 13.59 88.96 35 6.39 Yes 35 0.15 No 23 0.72 Yes -23 0.36 No 47 42.08 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 147629637 + NM_139244 STXBP5 1 0.41 0.14 8 4.1 78.09 48 8.69 Yes 35 1.01 Yes 0 0 No -22 0.63 No 48 49.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 147649834 + NM_139244 STXBP5 1 0.31 0.11 8 4.62 76.08 31 7.21 Yes 2 0.17 No 30 0.62 Yes -49 0.43 No 21 72.58 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 147660314 + NM_139244 STXBP5 1 20.47 5.9 72 8.25 85.37 40 7.73 Yes 27 2.4 Yes 39 0.79 Yes -39 0.7 Yes 31 86.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 147667079 + NM_139244 STXBP5 1 0.33 0.11 8 7.38 88.26 15 5.18 No 62 0.93 Yes 0 0 No -28 0.6 No 43 51.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 53197878 + NM_001130701 STYX 1 0.17 0.15 9 8.18 76.51 60 6.43 Yes 16 0.84 Yes 0 0 No -28 0.84 Yes 42 94.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 53201455 + NM_001130701 STYX 1 0.39 0.42 17 1 74.3 33 5.57 Yes 46 0.8 Yes 0 0 No -33 0.79 Yes 37 79.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 53211862 + NM_001130701 STYX 1 0.21 0.18 10 8.59 88.56 52 5.14 No 36 1.18 Yes 0 0 No -44 0.69 Yes 26 72.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 53224466 + NM_001130701 STYX 1 0.1 0.13 7 -4.06 0 9 3.87 No 38 1.62 Yes 0 0 No -50 0.44 No 45 57.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 53224596 + NM_001130701 STYX 1 0.53 0.85 36 4.18 0 80 8.03 Yes 67 0.82 Yes 0 0 No -26 0.47 No 44 24.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 53237754 + NM_001130701 STYX 1 0.57 0.83 35 -3.32 0 44 5.97 Yes 49 0.86 Yes 0 0 No -26 0.7 Yes 44 71.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75625916 - NM_001317788 STYXL1 1 0.19 0.24 15 -5.39 80.43 26 5.34 No 64 0.82 Yes 0 0 No -25 0.86 Yes 45 78.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75625916 - NM_001317788 STYXL1 1 0.15 0.18 12 -5.39 80.43 26 5.34 No 64 0.82 Yes 0 0 No -25 0.86 Yes 45 78.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75659846 - NM_001317788 STYXL1 1 56.93 23.76 72 6.01 87.47 44 4.27 No 16 0.59 No 28 0.72 Yes -28 0.65 No 42 67.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 75659992 - NM_001317788 STYXL1 1 0.98 0.4 23 5.53 82.97 41 5.79 Yes 70 -2.55 No 0 0 No -41 0.76 Yes 29 88.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 75663025 - NM_001317788 STYXL1 1 4.56 1.89 55 6.05 82.17 24 5.29 No 66 -0.24 No 0 0 No -24 0.85 Yes 46 79.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 75670140 - NM_001317788 STYXL1 1 0.37 0.15 10 10.95 85.81 65 7.68 Yes 52 0.89 Yes 0 0 No -37 0.9 Yes 33 81.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 32586474 + NM_006713 SUB1 1 0.09 2 56 6.19 83.02 34 5.39 No 5 1.51 Yes 33 0.89 Yes -33 0.85 Yes 37 84.48 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 32586507 + NM_006713 SUB1 1 0.05 1.04 46 7.7 80.59 25 5.48 No 38 1.49 Yes 30 0.6 Yes -24 0.86 Yes 46 90.98 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 32591674 + NM_006713 SUB1 1 0.69 21.22 72 -2.91 0 9 3.87 No 11 1.07 Yes 0 0 No -23 0.88 Yes 47 78.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 32592575 + NM_006713 SUB1 1 0.01 0.28 15 11.02 86.68 16 5.3 No 73 -3.05 No 0 0 No -34 0.83 Yes 36 88.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 32594676 + NM_006713 SUB1 1 0.04 1.31 52 8.73 88.57 29 5.42 No 62 0.77 Yes 28 0.78 Yes -28 0.73 Yes 42 92.6 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 32597289 + NM_006713 SUB1 1 0.05 2.06 58 6.38 76.99 18 4.56 No 47 1.33 Yes 0 0 No -29 0.37 No 41 48.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 32597360 + NM_006713 SUB1 1 0 0.17 11 5.74 82.76 24 4.87 No 11 0.46 No 0 0 No -23 0.47 No 50 43.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 32601128 + NM_006713 SUB1 1 0 0.14 9 3.99 86.99 21 5.2 No 19 0.43 No 0 0 No -46 0.73 Yes 24 41.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 48531014 - NM_003850 SUCLA2 1 0.51 0.93 44 11.01 79.79 32 8.59 Yes 19 1.18 Yes 0 0 No -31 0.97 Yes 39 97.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 48539776 - NM_003850 SUCLA2 1 2.47 4.64 70 10.53 94.52 27 6.78 Yes 14 1.65 Yes 0 0 No -26 0.7 Yes 44 76.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 48546219 - NM_003850 SUCLA2 1 0.21 0.4 21 3.54 86.09 24 7.42 Yes 11 1.24 Yes 0 0 No -23 0.93 Yes 47 93.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 48546222 - NM_003850 SUCLA2 1 0.42 0.75 33 7.78 79.5 21 7.21 Yes 8 1.27 Yes 0 0 No -20 0.9 Yes 50 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 48559685 - NM_003850 SUCLA2 1 0.42 0.58 29 8.06 94.74 19 4.78 No 61 -4.24 No 0 0 No -22 0.39 No 48 49.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 48559820 - NM_003850 SUCLA2 1 0.21 0.33 16 6.2 84.54 31 5.63 Yes 75 0.65 No 0 0 No -23 0.72 Yes 47 81.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 48561458 - NM_003850 SUCLA2 1 0.06 0.11 8 6.95 90.19 23 5.38 No 44 0.56 No 0 0 No -22 0.55 No 48 58.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 48565814 - NM_003850 SUCLA2 1 0.16 0.35 20 6.63 84.37 35 5.45 No 22 0.48 No 0 0 No -34 0.59 No 36 84.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 48569032 - NM_003850 SUCLA2 1 0.8 1.68 50 4.26 76.86 55 7.54 Yes 42 0.02 No 22 0.83 Yes -22 0.73 Yes 48 84.65 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 84651136 - NM_003849 SUCLG1 1 0.04 0.13 8 10.26 77.16 40 8.86 Yes 68 0.37 No 0 0 No -29 0.7 Yes 41 51.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 84658216 - NM_003849 SUCLG1 1 0.07 0.22 13 10.86 94.75 30 5.1 No 22 1.88 Yes 0 0 No -29 0.56 No 41 66.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 84659479 - NM_003849 SUCLG1 1 0.07 0.19 13 8.34 85.98 38 7.01 Yes 22 0.7 No 0 0 No -38 0.54 No 32 54.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 84660275 - NM_003849 SUCLG1 1 0.12 0.36 18 6.26 84.75 16 4.47 No 39 0.3 No 0 0 No -23 0.93 Yes 47 93.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 84663252 - NM_003849 SUCLG1 1 0.28 1.14 44 9.94 81.04 20 6.04 Yes 22 0.97 Yes 0 0 No -34 0.86 Yes 36 83.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 84666305 - NM_003849 SUCLG1 1 0.04 0.14 8 0.25 67.07 34 6 Yes 30 0.53 No 0 0 No -33 0.5 No 44 54.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 84676072 - NM_003849 SUCLG1 1 0.09 0.28 14 9.2 93.09 40 6.78 Yes 67 -2.15 No 39 0.25 Yes -42 0.63 No 28 70.62 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 84685701 - NM_003849 SUCLG1 1 0.07 0.14 9 -0.04 0 18 4.47 No 5 0.66 No 20 0.9 Yes -17 0.81 Yes 53 73.2 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 67459456 - NM_001177599 SUCLG2 1 0.63 1.06 40 1.54 84.58 20 5.91 Yes -2 -2.13 No 0 0 No -26 0.92 Yes 44 95.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 67459459 - NM_001177599 SUCLG2 1 2.12 3.19 68 2.91 81.55 17 5.69 Yes 4 0.11 No 23 0.87 Yes -23 0.9 Yes 47 94.85 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 67545124 - NM_001177599 SUCLG2 1 0.5 0.71 36 10.03 93.27 33 6.7 Yes 20 1.26 Yes 0 0 No -32 0.67 Yes 38 65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 67558796 - NM_001177599 SUCLG2 1 0.18 0.35 20 9.76 88.82 30 7.07 Yes 17 1.96 Yes 0 0 No -29 0.94 Yes 41 94.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 67610077 - NM_001177599 SUCLG2 1 0.43 0.85 38 9.84 93.23 25 5.56 Yes 12 1.16 Yes 0 0 No -24 0.77 Yes 46 74.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 67655230 - NM_001177599 SUCLG2 1 0.16 0.26 17 7.21 90.67 59 5.63 Yes 46 0.8 Yes 0 0 No -26 0.77 Yes 44 81.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 67656456 - NM_001177599 SUCLG2 1 0.69 1.19 45 8.44 86.87 26 7.55 Yes 13 1.34 Yes 0 0 No -25 0.92 Yes 45 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 67688264 - NM_001177599 SUCLG2 1 0.66 0.63 29 7.94 79.43 29 6 Yes 70 1.24 Yes 0 0 No -25 0.5 No 41 58.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 172536955 + NM_014283 SUCO 1 0.33 0.21 14 8 83.33 27 5.29 No 24 0.43 No 0 0 No -23 0.6 No 44 58.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 172540565 + NM_014283 SUCO 1 0.54 0.28 14 3.82 80.01 32 6.86 Yes 19 0.47 No 0 0 No -31 0.87 Yes 39 86.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 172572199 + NM_014283 SUCO 1 1.27 0.69 33 3.5 85.55 19 4.69 No 46 -1.96 No 0 0 No -18 0.8 Yes 52 65.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 172577889 + NM_014283 SUCO 1 1.18 0.65 32 3.97 76.71 41 6.44 Yes 64 -2.08 No 0 0 No -31 0.74 Yes 39 72.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 172578958 + NM_014283 SUCO 1 0.53 0.28 17 -0.79 71.77 28 6.85 Yes 15 1.91 Yes 0 0 No -27 0.69 Yes 43 84.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118818536 + NM_022491 SUDS3 1 0.7 0.68 28 2.81 0 24 6.76 Yes 11 1.22 Yes 0 0 No -27 0.7 Yes 43 85.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118819565 + NM_022491 SUDS3 1 0.32 0.29 15 7.52 87.81 26 7.86 Yes 54 1.59 Yes 0 0 No -25 0.96 Yes 45 97.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118821096 + NM_022491 SUDS3 1 0.47 0.46 23 3.92 0 20 3.99 No 17 -1.98 No 0 0 No -19 0.52 No 44 32.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 118825209 + NM_022491 SUDS3 1 1.07 1.17 42 6.56 81.44 25 5.93 Yes 51 0.81 Yes 0 0 No -24 0.35 No 46 41.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 118825692 + NM_022491 SUDS3 1 0.26 0.31 17 11.63 87.13 30 6.74 Yes 17 1.78 Yes 0 0 No -29 0.97 Yes 41 96.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118828892 + NM_022491 SUDS3 1 0.32 0.35 18 1.25 81.7 22 4.69 No 74 -4.23 No 18 0.62 Yes -21 0.78 Yes 49 61.79 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 118844886 + NM_022491 SUDS3 1 0.14 0.15 8 6 85.31 20 7.12 Yes 7 1.76 Yes 0 0 No -19 0.82 Yes 51 88.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104265039 + NM_001178133 SUFU 1 1.88 0.25 12 8.77 87.28 22 6.7 Yes 9 1.31 Yes 0 0 No -21 0.88 Yes 49 78.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104271851 + NM_001178133 SUFU 1 12.82 1.74 58 8.64 76.65 29 6.48 Yes 16 2.5 Yes 0 0 No -28 0.88 Yes 42 96.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104271856 + NM_001178133 SUFU 1 11 1.39 56 0.58 0 34 6.85 Yes 21 2.46 Yes 0 0 No -33 0.85 Yes 37 96.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104284516 + NM_001178133 SUFU 1 6.71 0.89 35 10.36 77.24 46 5.96 Yes 37 1.4 Yes 0 0 No -49 0.32 No 29 83.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 104288365 + NM_001178133 SUFU 1 1.05 0.14 8 6.14 91.15 22 4.66 No 3 0.21 No 0 0 No -22 0.32 No 48 37.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 104356893 + NM_001178133 SUFU 1 37.45 3.83 68 4.86 79.29 32 6 Yes 19 0.92 Yes 34 0.19 Yes -31 0.66 No 39 58.69 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 19388895 - NM_172231 SUGP1 1 0.2 0.14 8 5.84 77.73 35 6.06 Yes 22 1.71 Yes 0 0 No -30 0.85 Yes 40 88.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19390170 - NM_172231 SUGP1 1 0.4 0.31 21 3.31 71.57 15 4.88 No 39 -2.07 No 0 0 No -23 0.69 Yes 47 32.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 19390328 - NM_172231 SUGP1 1 0.69 0.54 27 0.43 0 17 4.58 No 35 -3.01 No 0 0 No -19 0.49 No 44 42.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19413186 - NM_172231 SUGP1 1 0.54 0.53 28 5 0 16 4.16 No 15 0.82 Yes 0 0 No -27 0.49 No 43 89.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 19413253 - NM_172231 SUGP1 1 0.1 0.1 7 4.51 75.2 75 6.89 Yes 62 1.42 Yes 26 0.84 Yes -38 0.67 Yes 32 52.35 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 19413256 - NM_172231 SUGP1 1 0.6 0.57 25 2.36 69.02 72 6.78 Yes 59 1.43 Yes 26 0.84 Yes -35 0.7 Yes 35 56.7 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 19414216 - NM_172231 SUGP1 1 1.46 1.26 51 4.07 92.25 13 4.97 No 67 0.23 No 23 0.65 Yes -23 0.62 No 50 71.03 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 19414645 - NM_172231 SUGP1 1 0.4 0.28 14 5.75 0 16 4.38 No 15 0.83 Yes 23 0.84 Yes -27 0.64 No 43 88.68 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 19414722 - NM_172231 SUGP1 1 1.43 0.93 41 8.31 72.52 43 8 Yes 30 1.61 Yes 42 0.82 Yes -42 0.93 Yes 28 96.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 19414853 - NM_172231 SUGP1 1 0.28 0.18 12 8.08 74.78 33 4.79 No 9 1.45 Yes 32 0.94 Yes -21 0.8 Yes 49 78.65 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 19415371 - NM_172231 SUGP1 1 0.16 0.11 8 5.99 77.74 29 6.39 Yes 16 0.4 No 0 0 No -28 0.88 Yes 42 93.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19427332 - NM_172231 SUGP1 1 1.19 0.83 35 6.21 83.7 63 8.66 Yes 50 1.33 Yes 21 0.35 Yes -21 0.41 No 52 56.7 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 19109795 - NM_001321697 SUGP2 1 2.43 3.71 69 6.39 80.82 39 6.48 Yes 26 1.79 Yes 38 0.44 Yes -38 0.84 Yes 32 70.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 19110017 - NM_001321697 SUGP2 1 0.26 0.4 21 8.45 83.8 21 6.39 Yes 54 -0.57 No 0 0 No -34 0.86 Yes 36 72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19114418 - NM_001321697 SUGP2 1 2.37 3.35 67 3.88 82.3 34 4.5 No -3 0.64 No 27 0.63 Yes -33 0.73 Yes 37 69.73 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 19118257 - NM_001321697 SUGP2 1 0.54 0.64 32 5.48 71.26 23 6.27 Yes 22 0.37 No 22 0.82 Yes -22 0.88 Yes 48 72.46 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 19119227 - NM_001321697 SUGP2 1 0.24 0.25 16 -5.2 0 9 4.47 No 21 1.47 Yes 0 0 No -33 0.89 Yes 37 92.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19123389 - NM_001321697 SUGP2 1 3.5 3.49 68 12.12 87.29 22 5.18 No 9 0.5 No 0 0 No -21 0.89 Yes 49 77.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19127512 - NM_001321697 SUGP2 1 0.15 0.15 10 8.21 91.35 16 5.83 Yes 57 -3.41 No 0 0 No -31 0.49 No 55 55.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19130792 - NM_001321697 SUGP2 1 0.33 0.5 20 9.42 85.81 34 8.37 Yes 21 1.72 Yes 0 0 No -33 0.95 Yes 37 95.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19134532 - NM_001321697 SUGP2 1 0.14 0.24 14 9.29 86.62 24 7.42 Yes 11 1.95 Yes 0 0 No -23 0.94 Yes 47 95.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 53233314 + NM_001320831 SUGT1 1 0.02 0.1 7 -15.11 0 27 6.29 Yes 63 0.88 Yes 0 0 No -27 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 53235523 + NM_001320831 SUGT1 1 0.18 0.26 16 4.81 76.13 26 5 No 30 1.44 Yes 0 0 No -23 0.69 Yes 52 71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 53235609 + NM_001320831 SUGT1 1 108.36 148.99 72 3.6 85.02 17 5.74 Yes 4 1.2 Yes 27 0.27 Yes -27 0.28 No 54 66.87 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 53235612 + NM_001320831 SUGT1 1 8.04 11.18 72 2.24 80.12 20 6 Yes 7 1.16 Yes 0 0 No -19 0.63 No 51 84.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 53236769 + NM_001320831 SUGT1 1 0.16 0.24 14 -3.01 0 18 4.53 No 36 0.31 No 22 0.83 Yes -52 0.75 Yes 18 41.04 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr13 53241944 + NM_001320831 SUGT1 1 0.02 0.1 7 6.18 71.92 33 8.22 Yes 20 1.53 Yes 0 0 No -32 0.89 Yes 38 87.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 53244645 + NM_001320831 SUGT1 1 0.09 0.33 18 7.44 79.28 32 6.18 Yes 6 0.59 No 0 0 No -31 0.83 Yes 39 92.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 46288466 - NM_018837 SULF2 1 2.55 1.14 35 -3.45 0 16 4.24 No 40 1.78 Yes 43 0.52 Yes -52 0.42 No 18 73.12 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 46290361 - NM_018837 SULF2 1 0.36 0.24 13 1.97 84.38 24 5 No 59 -2.86 No 23 0.93 Yes -23 0.92 Yes 47 84.99 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 46290364 - NM_018837 SULF2 1 1.84 0.28 16 1.42 70.55 21 4.69 No 56 -2.86 No 23 0.93 Yes -20 0.92 Yes 50 88.13 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 4458344 - NM_182760 SUMF1 1 3.02 1 40 10.36 89.94 30 5.1 No 41 0.75 No 0 0 No -30 0.69 Yes 40 79.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 4461824 - NM_182760 SUMF1 1 0.49 0.13 7 -1.06 0 10 4 No 58 0.6 No 0 0 No -35 0.85 Yes 35 96.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 4487323 - NM_182760 SUMF1 1 1.47 0.44 22 3.6 87.27 28 6.65 Yes 15 0.21 No 0 0 No -27 0.95 Yes 43 94.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 4489595 - NM_182760 SUMF1 1 0.35 0.14 9 10.6 91.13 43 4.37 No 2 0.73 No 0 0 No -23 0.95 Yes 47 95.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 56141806 + NM_015411 SUMF2 1 0.08 0.14 9 4.31 72.79 30 6.45 Yes 17 2.16 Yes 29 0.92 Yes -29 0.71 Yes 41 85.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 56142285 + NM_015411 SUMF2 1 0.11 0.24 14 3.27 0 10 4 No 59 1.14 Yes 0 0 No -26 0.89 Yes 44 88.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 56145869 + NM_015411 SUMF2 1 0.07 0.1 7 6.45 85.54 19 5.39 No 6 0.71 No 0 0 No -25 0.52 No 52 67.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 56144292 + NM_015411 SUMF2 1 0.07 0.15 9 4.4 69.63 29 4.85 No 13 0.65 No 31 0.73 Yes -28 0.68 Yes 42 71.35 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 56146614 + NM_015411 SUMF2 1 0.91 1.94 55 2.9 0 27 8.97 Yes 42 0.93 Yes 26 0.35 Yes -31 0.39 No 41 60.24 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 56146634 + NM_015411 SUMF2 1 0.39 0.88 36 4.29 87.63 27 5.2 No 62 0.94 Yes 0 0 No -26 0.64 No 44 68.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 56147045 + NM_015411 SUMF2 1 0.54 1.08 47 10.11 89.17 29 5.72 Yes 76 0.08 No 29 0.71 Yes -29 0.47 No 41 73.76 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 203072071 - NM_003352 SUMO1 1 0.07 0.47 17 4.14 73.8 32 5.44 No 60 0.01 No 22 0.95 Yes -31 0.43 No 44 64.9 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 203072726 - NM_003352 SUMO1 1 0.06 0.39 23 2.59 83.7 72 9.37 Yes 59 0.88 Yes 29 0.7 Yes -29 0.54 No 45 64.56 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 203079153 - NM_003352 SUMO1 1 1.12 6.9 71 0.2 0 31 6.63 Yes 18 0.59 No 25 0.47 Yes -30 0.79 Yes 40 66.08 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 203079948 - NM_003352 SUMO1 1 0.02 0.15 11 4.74 84.41 27 6.93 Yes 68 1.75 Yes 0 0 No -26 0.83 Yes 44 90.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 203084827 - NM_003352 SUMO1 1 0.03 0.11 7 -9.34 85.43 23 5.13 No 3 0.19 No 0 0 No -28 0.56 No 35 51.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 203085364 - NM_003352 SUMO1 1 0.06 0.25 18 2.84 78.66 25 6.27 Yes 12 0.89 Yes 0 0 No -24 0.66 No 46 83.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 203089857 - NM_003352 SUMO1 1 0.11 0.43 22 7.15 84.73 19 6.76 Yes 28 0.47 No 0 0 No -24 0.49 No 39 51.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 203096456 - NM_003352 SUMO1 1 0.1 0.38 22 7.52 90.67 26 7.77 Yes 56 0.79 Yes 25 0.69 Yes -25 0.57 No 46 64.75 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 203098395 - NM_003352 SUMO1 1 0.11 0.44 24 4.04 76.59 46 6.59 Yes 38 0.39 No 31 0.56 Yes -30 0.69 Yes 40 72.58 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 73177242 - NM_001005849 SUMO2 1 0.01 0.11 7 6.28 76.98 27 5.49 No 71 0.18 No 0 0 No -26 0.74 Yes 44 37.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 73177280 - NM_001005849 SUMO2 1 0.02 0.25 14 -3.6 0 29 6.81 Yes 33 0.21 No 0 0 No -26 0.54 No 37 51.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 46226999 - NM_006936 SUMO3 1 0.19 0.68 32 1.99 67.47 34 6.32 Yes 30 0.87 Yes 39 0.1 Yes -37 0.48 No 33 72.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr21 46228484 - NM_006936 SUMO3 1 0.04 0.13 7 8.6 87.2 28 4.05 No 61 0.2 No 27 0.63 Yes -23 0.38 No 47 33.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 878440 + NM_001130965 SUN1 1 0.3 0.19 13 3.41 0 9 3.87 No 13 1.41 Yes 0 0 No -25 0.92 Yes 45 90.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 882118 + NM_001130965 SUN1 1 0.48 0.32 20 6.37 86.74 41 5.88 Yes 20 1.15 Yes 32 0.71 Yes -35 0.5 No 37 35.63 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 882603 + NM_001130965 SUN1 1 0.73 0.47 23 12.09 84.49 22 7.07 Yes 9 1.68 Yes 21 0.83 Yes -21 0.87 Yes 49 95.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 892449 + NM_001130965 SUN1 1 41.38 16.1 72 7.6 95.04 50 7.28 Yes 50 0.55 No 33 0.19 Yes -36 0.83 Yes 34 79.08 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 912856 + NM_001130965 SUN1 1 0.14 0.13 8 -4.4 0 47 8.66 Yes 34 0.19 No 0 0 No -46 0.61 No 24 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 39134052 - NM_015374 SUN2 1 0.55 0.71 34 12.55 84.35 17 5.48 No 41 -0.45 No 0 0 No -24 0.52 No 46 37.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 39134756 - NM_015374 SUN2 1 0.53 0.68 37 6.19 0 27 6.62 Yes 14 1.46 Yes 0 0 No -26 0.9 Yes 44 94.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39135429 - NM_015374 SUN2 1 0.64 0.86 39 3.41 79.42 59 7.94 Yes 46 0.38 No 27 0.9 Yes -30 0.89 Yes 40 82.58 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 39141151 - NM_015374 SUN2 1 0.17 0.15 9 7.42 82.45 23 5.11 No 28 0.69 No 22 0.78 Yes -22 0.46 No 43 67.14 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 39141182 - NM_015374 SUN2 1 0.79 0.97 42 5.58 84.19 25 6.42 Yes -3 1.04 Yes 22 0.78 Yes -24 0.79 Yes 46 84.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 39143170 - NM_015374 SUN2 1 0.1 0.13 8 1.83 79.69 20 5.57 Yes 7 1.02 Yes 0 0 No -19 0.71 Yes 51 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39144292 - NM_015374 SUN2 1 0.1 0.11 8 6.49 90.92 29 5.39 No 40 0.56 No 0 0 No -28 0.66 No 42 57.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 39146389 - NM_015374 SUN2 1 0.28 0.29 18 6.69 83.45 22 6.15 Yes 60 -3.92 No 21 0.82 Yes -21 0.85 Yes 49 84.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 39147289 - NM_015374 SUN2 1 0.1 0.1 7 2.45 81.44 23 6.86 Yes 10 1.42 Yes 0 0 No -22 0.94 Yes 48 90.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39150693 - NM_015374 SUN2 1 1.12 0.19 14 5.07 86.94 15 5.16 No 39 0.06 No 0 0 No -23 0.47 No 19 23.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 39150696 - NM_015374 SUN2 1 0.58 0.13 9 2.99 82.35 12 4.87 No 36 0.07 No 32 0.51 Yes -49 0.29 No 22 25.41 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 39150712 - NM_015374 SUN2 1 41.74 8.63 72 3.43 66.9 33 7.48 Yes 72 0.6 No 32 0.51 Yes -33 0.36 No 38 54.14 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 56392965 + NM_000456 SUOX 1 2.95 0.13 9 3.7 0 29 6.71 Yes 16 0.98 Yes 0 0 No -33 0.68 Yes 37 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56397364 + NM_000456 SUOX 1 0.76 0.19 12 4.22 82.03 16 5.07 No 69 0.76 No 19 0.8 Yes -23 0.55 No 47 85.95 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 56397937 + NM_000456 SUOX 1 1.14 0.31 20 4.41 81.81 40 7.03 Yes 27 0.95 Yes 19 0.57 Yes -39 0.51 No 31 56.69 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 21822013 - NM_007192 SUPT16H 1 0.04 0.13 7 -3.06 47.54 28 5.36 No 57 -4.52 No 23 0.49 Yes -27 0.77 Yes 43 49.63 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 21837514 - NM_007192 SUPT16H 1 0.04 0.15 7 -16.6 0 33 5.9 Yes 20 0.5 No 0 0 No -32 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 21840130 - NM_007192 SUPT16H 1 0.08 0.24 15 1.55 78.28 51 8.39 Yes 38 0.8 Yes 25 0.79 Yes -22 0.46 No 48 77.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 21840877 - NM_007192 SUPT16H 1 1.11 3.32 67 5.34 78.75 40 6.08 Yes 27 0.1 No 28 0.69 Yes -28 0.66 Yes 42 69.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 21851929 - NM_007192 SUPT16H 1 1.5 3.01 62 8.55 91.27 39 7.72 Yes 26 1.66 Yes 38 0.21 Yes -38 0.75 Yes 32 74.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 37583944 - NM_001014286 SUPT20H 1 1.89 0.17 11 5.87 82.94 32 6.2 Yes 19 1.22 Yes 0 0 No -36 0.4 No 34 67.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 37583944 - NM_001014286 SUPT20H 1 6.2 0.6 29 5.87 82.94 32 6.2 Yes 19 1.22 Yes 0 0 No -36 0.4 No 34 67.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 37591463 - NM_001014286 SUPT20H 1 0.61 0.53 25 1.03 71.16 26 6.4 Yes 13 0.71 No 0 0 No -25 0.8 Yes 45 91.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 37591466 - NM_001014286 SUPT20H 1 10.52 9.57 72 5.75 80.62 23 6.16 Yes 10 0.72 No 22 0.78 Yes -22 0.82 Yes 48 91.74 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 37595669 - NM_001014286 SUPT20H 1 0.15 0.15 10 6.69 85.59 25 7.24 Yes -2 0.44 No 0 0 No -24 0.66 No 46 73.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 37596455 - NM_001014286 SUPT20H 1 44.96 22.47 72 5.8 81.68 36 5.91 Yes 53 1.73 Yes 28 0.64 Yes -28 0.4 No 43 49.17 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 37597182 - NM_001014286 SUPT20H 1 40.83 20.22 72 13.32 97.49 26 5.09 No 13 1.23 Yes 25 0.9 Yes -25 0.89 Yes 45 90.54 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 37598263 - NM_001014286 SUPT20H 1 0.07 0.11 8 5.46 74.61 31 6.19 Yes 74 1.11 Yes 0 0 No -30 0.71 Yes 40 88.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 37619514 - NM_001014286 SUPT20H 1 33.24 27.29 72 6.24 76.57 24 4.34 No 61 1.06 Yes 23 0.93 Yes -23 0.91 Yes 47 92.6 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 37621546 - NM_001014286 SUPT20H 1 4 3.25 66 5.79 64.2 25 6.32 Yes 12 1.61 Yes 24 0.93 Yes -24 0.75 Yes 46 94.94 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 37633451 - NM_001014286 SUPT20H 1 0.34 0.19 12 5.85 88.01 27 5.01 No 27 1.02 Yes 0 0 No -26 0.73 Yes 44 69.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56425213 - NM_003168 SUPT4H1 1 0.07 0.17 10 8.69 86.02 20 5 No 7 1 Yes 0 0 No -19 0.7 Yes 51 68.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 39948930 + NM_003169 SUPT5H 1 0.18 0.33 18 3.25 73.74 79 9.57 Yes 66 1.72 Yes 27 0.6 Yes -26 0.35 No 49 72.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 39953504 + NM_003169 SUPT5H 1 0.07 0.18 10 3.01 0 32 6.66 Yes 19 1.07 Yes 0 0 No -31 0.67 Yes 39 69.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39957043 + NM_003169 SUPT5H 1 0.02 0.1 7 6.78 78.68 49 6.63 Yes 36 0.56 No 0 0 No -32 0.6 No 45 72.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 39957318 + NM_003169 SUPT5H 1 0.1 0.22 12 -1.89 0 37 7.48 Yes 24 2.23 Yes 0 0 No -36 0.85 Yes 34 88.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39958427 + NM_003169 SUPT5H 1 0.06 0.1 7 4.63 76.08 17 5.48 No 36 1.69 Yes 0 0 No -21 0.37 No 54 38.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39959881 + NM_003169 SUPT5H 1 0.65 1.67 58 -6.67 0 23 6.05 Yes 70 0.77 Yes 22 0.87 Yes -22 0.36 No 56 12.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 39964059 + NM_003169 SUPT5H 1 0.13 0.25 16 0.78 0 21 6.08 Yes 8 0.99 Yes 0 0 No -20 0.47 No 50 58.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 39964586 + NM_003169 SUPT5H 1 0.15 0.17 10 4.76 76.32 21 4.69 No 75 -5.62 No 21 0.88 Yes -20 0.72 Yes 50 68.86 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 39964717 + NM_003169 SUPT5H 1 0.54 0.58 31 10.88 87.26 24 4.18 No 71 0.6 No 0 0 No -22 0.65 No 47 78.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 27001257 + NM_001320755 SUPT6H 1 0.19 0.24 14 1.73 70.4 24 4.25 No -3 1.46 Yes 19 0.68 Yes -23 0.93 Yes 47 91.93 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 27003082 + NM_001320755 SUPT6H 1 0.36 0.75 34 7.12 79.55 41 7.1 Yes -2 2.24 Yes 0 0 No -22 0.42 No 33 70.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 27009963 + NM_001320755 SUPT6H 1 0.16 0.28 17 1.65 0 18 5.74 Yes 38 -0.07 No 0 0 No -26 0.84 Yes 44 85.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 27010246 + NM_001320755 SUPT6H 1 0.07 0.14 9 1.41 62.94 17 6.03 Yes 41 1.23 Yes 24 0.94 Yes -40 0.53 No 35 52.36 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 27013681 + NM_001320755 SUPT6H 1 0.07 0.13 9 -6.6 0 16 4.36 No 18 1.33 Yes 0 0 No -30 0.68 Yes 36 72.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27014109 + NM_001320755 SUPT6H 1 0.12 0.24 13 0.8 0 23 6.32 Yes 10 2.31 Yes 0 0 No -22 0.68 Yes 48 80.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27014192 + NM_001320755 SUPT6H 1 0.09 0.17 9 5.01 82.93 16 5.61 Yes 45 0.76 No 0 0 No -23 0.49 No 40 50.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 27015706 + NM_001320755 SUPT6H 1 0.6 0.97 40 8.6 89.7 17 7.49 Yes 4 1.77 Yes 0 0 No -23 0.91 Yes 47 93.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27022347 + NM_001320755 SUPT6H 1 0.48 0.9 41 10.44 89.94 18 5.39 No 64 0.68 No 19 0.5 Yes -20 0.81 Yes 50 82.03 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 27023834 + NM_001320755 SUPT6H 1 0.31 0.5 20 1.2 71.88 16 3.5 No 72 -2.13 No 33 0.74 Yes -48 0.32 No 48 45.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 27024394 + NM_001320755 SUPT6H 1 0.15 0.25 14 11.37 92.4 24 5.35 No 11 -0.52 No 0 0 No -26 0.67 Yes 44 72.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 70960072 + NM_001323585 SUPV3L1 1 0.27 0.32 18 5.82 71.52 31 5.77 Yes 44 0.21 No 0 0 No -30 0.62 No 40 45.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 70962198 + NM_001323585 SUPV3L1 1 0.37 0.38 20 -0.6 0 28 4.51 No 61 0.72 No 0 0 No -30 0.86 Yes 40 83.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 70962698 + NM_001323585 SUPV3L1 1 1.45 1.04 42 8.28 86.07 49 6.49 Yes 36 0.36 No 0 0 No -28 0.83 Yes 42 59.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 70968381 + NM_001323585 SUPV3L1 1 0.15 0.28 13 5.96 78.31 17 5.56 Yes 31 1.92 Yes 0 0 No -50 0.36 No 46 43.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 136219586 - NM_001280787 SURF1 1 0.1 0.13 9 3.02 83.56 21 4.69 No 47 0.38 No 21 0.71 Yes -20 0.5 No 50 50.87 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 136227209 + NM_017503 SURF2 1 1.01 0.67 29 3.61 84.17 16 6.27 Yes 3 1.31 Yes 0 0 No -15 0.61 No 51 64.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 136227934 + NM_017503 SURF2 1 8.05 3.57 67 -2.49 68.78 28 5.55 No 15 0.64 No 0 0 No -27 0.64 No 43 71.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 136233007 - NM_001280790 SURF4 1 0.11 0.47 29 9.7 81.37 48 5.07 No 35 0.1 No 0 0 No -20 0.77 Yes 50 66.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 136200590 - NM_001278942 SURF6 1 0.65 0.74 34 4.01 77.48 39 5.59 Yes 20 1.16 Yes 0 0 No -38 0.54 No 38 76.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 114820886 - NM_001282640 SUSD1 1 5.07 2.03 53 7.24 78.89 23 3.78 No 10 0.92 Yes 0 0 No -22 0.88 Yes 48 81.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 114864493 - NM_001282640 SUSD1 1 0.7 0.13 7 4.86 72.99 26 4.83 No 10 0.31 No 0 0 No -25 0.66 No 44 58.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 114868129 - NM_001282640 SUSD1 1 2.72 0.38 18 9.3 82.34 31 8.74 Yes -1 1.61 Yes 0 0 No -30 0.87 Yes 40 84.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 114893125 - NM_001282640 SUSD1 1 0.61 0.15 8 10.07 88.27 27 6.08 Yes 67 -2.49 No 0 0 No -26 0.71 Yes 44 77.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 114905898 - NM_001282640 SUSD1 1 0.5 0.18 12 -4.74 0 9 2.93 No 66 1.15 Yes 0 0 No -39 0.29 No 31 20.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 114908290 - NM_001282640 SUSD1 1 0.4 0.14 7 9.77 87.23 15 5.38 No 73 0.63 No 0 0 No -26 0.89 Yes 44 91.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 114908454 - NM_001282640 SUSD1 1 1.03 0.32 17 7.98 90.42 37 5.93 Yes 67 1.55 Yes 0 0 No -36 0.66 No 34 42.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 114912113 - NM_001282640 SUSD1 1 0.42 0.11 8 -0.31 0 28 6.4 Yes 15 1.61 Yes 0 0 No -27 0.9 Yes 43 91.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 114912118 - NM_001282640 SUSD1 1 0.42 0.14 8 7.4 77.16 23 6 Yes 10 1.65 Yes 0 0 No -22 0.88 Yes 48 90.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 114936950 - NM_001282640 SUSD1 1 2.9 0.1 7 3.71 75.65 47 6.02 Yes 16 1.16 Yes 0 0 No -28 0.96 Yes 42 97.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95837853 + NM_001287005 SUSD3 1 9.56 0.67 34 2.91 73.29 43 8.68 Yes 30 2.1 Yes 0 0 No -42 0.81 Yes 28 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95835229 + NM_001287005 SUSD3 1 2.94 0.17 10 5.6 87.09 27 5.48 No 66 -4.86 No 0 0 No -26 0.92 Yes 44 89.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 95837748 + NM_001287005 SUSD3 1 1.38 0.13 8 3.71 0 20 4.36 No 60 2.71 Yes 0 0 No -59 0.16 No 44 5.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 95837853 + NM_001287005 SUSD3 1 10.3 0.72 31 2.91 73.29 43 8.68 Yes 30 2.1 Yes 0 0 No -42 0.81 Yes 28 95.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 95840159 + NM_001287005 SUSD3 1 1.76 0.82 38 3.56 83.3 23 4.68 No NA NA NA 0 0 No -24 0.45 No 50 39.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95843619 + NM_001287005 SUSD3 1 0.41 0.26 15 11.59 92.98 23 4.26 No 10 1 Yes 0 0 No -22 0.86 Yes 48 75.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 70082235 + NM_014734 SUSD6 1 0.47 0.32 16 12.42 81.16 39 8.37 Yes 26 1.55 Yes 27 0.39 Yes -27 0.41 No 32 62.97 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 70137032 + NM_014734 SUSD6 1 2.67 3.97 65 10.73 89.76 30 4.51 No 1 1.14 Yes 0 0 No -22 0.75 Yes 48 71.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 70170794 + NM_014734 SUSD6 1 0.93 1.24 50 8.16 89.17 25 6.57 Yes 75 1.3 Yes 0 0 No -29 0.63 No 41 72.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 70177672 + NM_014734 SUSD6 1 0.07 0.11 7 -9.76 0 35 6.78 Yes 22 1.25 Yes 0 0 No -34 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 48560756 + NM_003173 SUV39H1 1 0.58 0.33 18 6.68 86.41 22 5.71 Yes 24 1.05 Yes 0 0 No -21 0.86 Yes 49 69.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 14941523 + NM_024670 SUV39H2 1 0.15 0.17 9 2.15 79.53 13 5.03 No 76 0.72 No 18 0.91 Yes -24 0.83 Yes 46 67.08 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 14943198 + NM_024670 SUV39H2 1 0.88 1.24 44 5.77 75.68 28 6.17 Yes 69 1.73 Yes 0 0 No -27 0.66 No 43 67.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 14944243 + NM_024670 SUV39H2 1 0.2 0.25 16 3.85 72.4 26 7.15 Yes 64 1.24 Yes 0 0 No -25 0.88 Yes 45 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30267272 + NM_015355 SUZ12 1 0.54 1.68 56 -7.07 0 15 4.24 No 13 0.63 No 29 0.43 Yes -40 0.5 No 29 46.16 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 30267283 + NM_015355 SUZ12 1 0.04 0.1 7 -8.43 0 19 4.45 No 24 0.63 No 29 0.43 Yes -18 0.29 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 30267306 + NM_015355 SUZ12 1 0.04 0.15 8 -4.96 74.48 32 4.59 No 47 0.64 No 0 0 No -31 0.56 No 39 70.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 30272622 + NM_015355 SUZ12 1 0.05 0.13 8 5.22 76.06 42 8.35 Yes -4 1.18 Yes 0 0 No -30 0.48 No 40 67.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 30273005 + NM_015355 SUZ12 1 0.13 0.38 20 1.11 79.44 46 6.81 Yes 33 1.23 Yes 0 0 No -33 0.81 Yes 37 77.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30274184 + NM_015355 SUZ12 1 0.08 0.22 13 6.46 78.76 30 6.8 Yes 17 0.07 No 0 0 No -25 0.69 Yes 45 81.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 30276069 + NM_015355 SUZ12 1 0.03 0.1 7 2.21 0 17 4.58 No 36 2.42 Yes 0 0 No -48 0.67 Yes 22 86.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30291839 + NM_015355 SUZ12 1 0.55 1.78 56 9.61 82.03 27 8.29 Yes 14 1.06 Yes 0 0 No -26 0.96 Yes 44 94.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30302603 + NM_015355 SUZ12 1 0.25 0.64 31 8.43 81.93 67 6.53 Yes 30 0.67 No 0 0 No -31 0.27 No 33 36.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 30302667 + NM_015355 SUZ12 1 0.31 0.75 33 6.25 77.6 24 4.06 No 4 0.99 Yes 0 0 No -23 0.5 No 47 62.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 30305409 + NM_015355 SUZ12 1 0.08 0.24 14 3.6 85.02 17 5.29 No 62 1.24 Yes 0 0 No -21 0.44 No 54 70.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 30305412 + NM_015355 SUZ12 1 0.18 0.58 28 2.24 80.12 20 5.57 Yes 65 1.24 Yes 0 0 No -19 0.68 Yes 51 82.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30315340 + NM_015355 SUZ12 1 0.06 0.22 10 2.17 87.36 37 6 Yes 24 0.95 Yes 0 0 No -29 0.79 Yes 41 72.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30315340 + NM_015355 SUZ12 1 0.04 0.15 8 2.17 87.36 37 6 Yes 24 0.95 Yes 0 0 No -29 0.79 Yes 41 72.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30320247 + NM_015355 SUZ12 1 0.17 0.61 27 0.48 57.41 30 5.23 No 50 0.07 No 27 0.32 Yes -29 0.57 No 41 35.9 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 30320906 + NM_015355 SUZ12 1 0.06 0.15 9 -2.32 53.59 26 5.64 Yes 22 0.67 No 0 0 No -34 0.53 No 16 53.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 29070318 + NR_024187 SUZ12P1 1 3.19 0.25 16 10.91 97.1 28 6.13 Yes 15 0.52 No 27 0.69 Yes -27 0.72 Yes 43 80.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 29070318 + NR_024187 SUZ12P1 1 3.63 0.32 16 10.91 97.1 28 6.13 Yes 15 0.52 No 27 0.69 Yes -27 0.72 Yes 43 80.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 29070318 + NR_024187 SUZ12P1 1 13.64 1 45 10.91 97.1 28 6.13 Yes 15 0.52 No 27 0.69 Yes -27 0.72 Yes 43 80.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 43279572 - NM_199342 SVBP 1 0.63 0.46 27 -0.86 0 25 4.9 No 12 0.62 No 0 0 No -36 0.53 No 40 43.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 43279576 - NM_199342 SVBP 1 1.48 1.01 43 1.73 72.94 21 4.69 No 8 0.62 No 32 0.68 Yes -32 0.67 Yes 44 39.84 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 22848845 - NM_001320341 SVIP 1 0.33 0.69 30 2.38 62.07 26 5.56 Yes 13 -1.97 No 0 0 No -25 0.83 Yes 12 49.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 22849441 - NM_001320341 SVIP 1 0.19 0.35 18 -2.19 0 28 4.89 No 9 1.12 Yes 23 0.78 Yes -27 0.78 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 22850956 - NM_001320341 SVIP 1 0.36 0.68 29 4.01 75.74 27 5.29 No 9 -2.52 No 25 0.74 Yes -26 0.79 Yes 44 88.19 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 9694105 + NM_015055 SWAP70 1 0.11 0.29 17 10.07 88.27 30 8.54 Yes 17 1.65 Yes 0 0 No -29 0.92 Yes 41 95.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9711233 + NM_015055 SWAP70 1 0.04 0.11 8 7.99 82.57 28 6.84 Yes 15 1.48 Yes 0 0 No -27 0.92 Yes 43 92.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9716107 + NM_015055 SWAP70 1 0.32 0.97 44 10.01 92.8 23 6.81 Yes 10 1.18 Yes 0 0 No -22 0.84 Yes 48 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9720755 + NM_015055 SWAP70 1 0.16 0.44 24 9.06 83.84 22 5.83 Yes 9 0.81 Yes 0 0 No -21 0.72 Yes 49 79.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9724942 + NM_015055 SWAP70 1 0.89 2.71 60 10.75 87.29 27 6.46 Yes 14 0.94 Yes 26 0.66 Yes -30 0.65 No 44 78.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 9754104 + NM_015055 SWAP70 1 0.14 0.68 36 5.75 76.61 24 4.63 No 57 1.05 Yes 0 0 No -23 0.89 Yes 47 78.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9761709 + NM_015055 SWAP70 1 0.02 0.13 8 0.23 62.76 30 4.95 No 65 -3.05 No 24 0.8 Yes -29 0.71 Yes 52 46.18 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 9770637 + NM_015055 SWAP70 1 0.4 1.57 51 -1.81 0 24 4.41 No 49 0.5 No 0 0 No -31 0.57 No 39 86.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 9771394 + NM_015055 SWAP70 1 0.07 0.35 21 5.29 76.84 29 4.52 No 7 0.49 No 20 0.76 Yes -28 0.57 No 42 50.34 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 9772106 + NM_015055 SWAP70 1 0.05 0.24 13 8.14 79.07 16 5.03 No 3 0.93 Yes 0 0 No -23 0.71 Yes 47 66.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 9773098 + NM_015055 SWAP70 1 0.04 0.17 10 11.28 98.13 20 5 No 7 0.38 No 0 0 No -20 0.38 No 50 47.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 9773495 + NM_015055 SWAP70 1 0.13 0.58 29 1.54 82.63 24 4.98 No 42 0.08 No 0 0 No -23 0.93 Yes 47 93.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131040912 + NM_001318092 SWI5 1 0.23 0.1 7 5.94 84.77 25 5.81 Yes 31 0.36 No 24 0.9 Yes -24 0.86 Yes 46 84.69 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 131047783 + NM_001318092 SWI5 1 0.38 0.19 11 13.99 94.97 16 5.39 No NA NA NA 0 0 No -24 0.84 Yes 46 90.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131051021 + NM_001318092 SWI5 1 0.19 0.11 8 8.85 80.8 32 5.08 No 6 1.21 Yes 0 0 No -27 0.66 No 43 71.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 11486191 + NM_175871 SWSAP1 1 0.93 0.13 7 4.48 76.51 37 7.87 Yes 24 1.68 Yes 0 0 No -35 0.83 Yes 34 84.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 185130530 + NM_001105518 SWT1 1 1.11 0.14 7 9.56 87.9 26 6.48 Yes 13 1.09 Yes 0 0 No -25 0.98 Yes 45 97.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 185138906 + NM_001105518 SWT1 1 1.37 0.14 9 -2.35 0 20 4.76 No 0 0.87 Yes 0 0 No -45 0.39 No 25 78.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 185138931 + NM_001105518 SWT1 1 26.67 2.86 64 11.03 93.82 21 5.83 Yes 25 1.35 Yes 0 0 No -20 0.68 Yes 50 81.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 185233446 + NM_001105518 SWT1 1 5.08 0.39 20 7.77 79.54 34 6.04 Yes 8 1.07 Yes 0 0 No -33 0.44 No 37 70.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 16753387 + NM_032796 SYAP1 1 1.99 3.76 67 -0.56 56.58 43 5.56 Yes 53 1.13 Yes 0 0 No -31 0.71 Yes 28 66.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 16759841 + NM_032796 SYAP1 1 0.15 0.42 21 -4.6 55.12 49 6.53 Yes 36 1.77 Yes 0 0 No -57 0.54 No 13 57.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 16759844 + NM_032796 SYAP1 1 0.22 0.65 30 -6.16 0 12 2.92 No 39 1.77 Yes 0 0 No -60 0.39 No 16 58.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 16774787 + NM_032796 SYAP1 1 0.06 0.15 9 -1.44 80.63 42 6.5 Yes 29 0.93 Yes 0 0 No -29 0.7 Yes 41 54.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 16778356 + NM_032796 SYAP1 1 0.2 0.38 23 5.07 87.5 39 6.4 Yes 76 -3.37 No 0 0 No -38 0.76 Yes 32 81.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25554745 - NM_015484 SYF2 1 0.16 0.11 7 -4.34 0 15 4 No 57 0.56 No 20 0.73 Yes -14 0.42 No 41 54.52 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 93608285 + NM_001174167 SYK 1 0.14 0.22 13 -1.1 56.9 36 5.91 Yes 37 0.78 Yes 0 0 No -30 0.9 Yes 40 86.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 93626286 + NM_001174167 SYK 1 0.07 0.11 8 7.75 85.19 31 6.82 Yes 18 0.89 Yes 0 0 No -30 0.72 Yes 40 87.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 93626874 + NM_001174167 SYK 1 0.16 0.31 17 3.31 0 33 5.92 Yes 32 2.22 Yes 0 0 No -32 0.94 Yes 38 96.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 93639854 + NM_001174167 SYK 1 0.12 0.25 16 -6.35 75.26 19 4.76 No 3 0.24 No 0 0 No -35 0.67 Yes 35 66.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 93640308 + NM_001174167 SYK 1 0.1 0.21 12 9.33 83.8 35 4.08 No 17 0.96 Yes 0 0 No -29 0.77 Yes 41 89.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 93648124 + NM_001174167 SYK 1 0.13 0.24 12 -1.15 0 17 4.58 No 4 0.44 No 0 0 No -16 0.65 No 54 88.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 93648127 + NM_001174167 SYK 1 0.1 0.19 11 2.98 80.41 20 4.9 No 7 0.24 No 0 0 No -19 0.75 Yes 51 92.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 93658620 + NM_001174167 SYK 1 0.94 1.74 52 10.06 87.26 31 5.98 Yes 6 1.11 Yes 0 0 No -30 0.93 Yes 40 96.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46318953 - NM_004819 SYMPK 1 0.21 0.29 15 -11.8 61.85 48 7.68 Yes 35 1.35 Yes 0 0 No -47 0.5 No 23 83.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 46319832 - NM_004819 SYMPK 1 0.45 0.57 29 -1.88 0 32 6.16 Yes 73 -4.11 No 0 0 No -31 0.76 Yes 39 73.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46319873 - NM_004819 SYMPK 1 0.68 0.85 42 4.31 78.05 29 5.92 Yes 32 -3.89 No 28 0.79 Yes -28 0.67 Yes 42 75.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 46321452 - NM_004819 SYMPK 1 0.49 0.79 39 4.75 85.67 10 5.48 No 58 -2.47 No 0 0 No -25 0.67 Yes 45 59.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 46321478 - NM_004819 SYMPK 1 0.07 0.11 8 -3.54 0 30 5.74 Yes 2 0.2 No 0 0 No -29 0.8 Yes 41 67.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 46321482 - NM_004819 SYMPK 1 1.5 2.44 64 5.38 72.02 26 5.39 No -2 0.46 No 0 0 No -25 0.84 Yes 45 77.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46331204 - NM_004819 SYMPK 1 0.17 0.18 10 8.71 87.87 22 5.29 No 76 -4.09 No 29 0.76 Yes -21 0.53 No 49 51.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 46331237 - NM_004819 SYMPK 1 0.23 0.26 14 0.95 78.4 20 5.1 No 58 -5.71 No 0 0 No -19 0.61 No 51 40.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46331240 - NM_004819 SYMPK 1 0.1 0.11 8 0.74 77.58 17 4.8 No 4 0.13 No 0 0 No -16 0.5 No 54 42.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46338457 - NM_004819 SYMPK 1 0.17 0.35 18 -2.02 73.49 25 5.28 No 12 0.11 No 0 0 No -24 0.96 Yes 46 93.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46341371 - NM_004819 SYMPK 1 0.08 0.18 11 1.29 75.26 33 5.93 Yes 7 0.68 No 0 0 No -32 0.62 No 38 60.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 46341872 - NM_004819 SYMPK 1 0.08 0.13 7 -1.9 68.97 37 5.11 No -3 0.48 No 0 0 No -34 0.75 Yes 36 82.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46348905 - NM_004819 SYMPK 1 0.38 0.68 35 6.4 83.21 26 6.08 Yes 13 1.21 Yes 0 0 No -25 0.88 Yes 45 86.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46355675 - NM_004819 SYMPK 1 0.12 0.26 15 3.69 69.63 10 4.88 No 50 -2.94 No 26 0.89 Yes -30 0.34 No 52 42.81 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 46357756 - NM_004819 SYMPK 1 2.64 3.39 70 -9.47 0 13 4.36 No 32 1.22 Yes 0 0 No -38 0.67 Yes 32 64.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 46357759 - NM_004819 SYMPK 1 2.03 2.56 68 -9.37 0 10 4 No 29 1.22 Yes 0 0 No -35 0.66 Yes 35 75.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46357844 - NM_004819 SYMPK 1 3.03 3.86 71 5 78.99 20 2.79 No 42 -4.17 No 23 0.64 Yes -23 0.76 Yes 47 42.82 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 46358772 - NM_004819 SYMPK 1 0.14 0.18 7 11.45 91.37 32 5.19 No 2 0.54 No 0 0 No -31 0.78 Yes 39 66.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 46363210 - NM_004819 SYMPK 1 0.52 0.65 31 12.22 88.27 31 7.87 Yes 18 1.75 Yes 0 0 No -30 0.95 Yes 40 94.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46363380 - NM_004819 SYMPK 1 0.81 1.03 42 8.67 88.17 32 6.71 Yes 23 1.55 Yes 0 0 No -35 0.75 Yes 35 77.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46365266 - NM_004819 SYMPK 1 0.13 0.15 7 3.08 84 15 4.78 No 2 1.5 Yes 0 0 No -59 0.53 No 11 82.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 46365286 - NM_004819 SYMPK 1 5.31 6.71 72 4.19 0 40 7.61 Yes 60 -2.57 No 39 0.74 Yes -39 0.9 Yes 31 88.06 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 46365290 - NM_004819 SYMPK 1 0.11 0.14 9 2.12 84.41 36 7.35 Yes 56 -2.56 No 39 0.74 Yes -35 0.87 Yes 35 91.99 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 86327143 - NM_006372 SYNCRIP 1 0.03 0.19 13 9.75 94.16 22 5.62 Yes 9 1.25 Yes 0 0 No -22 0.41 No 48 62.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 86333115 - NM_006372 SYNCRIP 1 0.05 0.51 22 7.76 81.04 20 7.14 Yes 7 1.2 Yes 0 0 No -19 0.69 Yes 51 85.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 86336985 - NM_006372 SYNCRIP 1 0.01 0.1 7 10.07 88.27 25 5.47 No 45 1.3 Yes 0 0 No -25 0.72 Yes 45 86.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 86346406 - NM_006372 SYNCRIP 1 0.03 0.15 7 8.62 80.94 31 6.4 Yes 18 1.54 Yes 0 0 No -34 0.71 Yes 36 82.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 86350277 - NM_006372 SYNCRIP 1 0.03 0.15 7 0.95 0 9 3.87 No 11 1.17 Yes 0 0 No -26 0.46 No 44 51.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 152457450 - NM_033071 SYNE1 1 0.31 0.13 7 8.74 86.78 31 6.76 Yes 22 1.48 Yes 0 0 No -30 0.9 Yes 40 91.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 152469367 - NM_033071 SYNE1 1 0.52 0.24 13 7.72 80.77 24 5.97 Yes NA NA NA 0 0 No -24 0.62 No 46 63.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 152469400 - NM_033071 SYNE1 1 2.54 0.96 39 9.41 87.1 24 4.91 No 76 -2.77 No 0 0 No -22 0.83 Yes 48 84.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 152583299 - NM_033071 SYNE1 1 1.1 0.39 22 4.27 84.87 30 5.54 No 2 1.27 Yes 0 0 No -29 0.88 Yes 41 87.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 152590425 - NM_033071 SYNE1 1 22.16 5.03 72 2.04 67.83 25 5.94 Yes 12 0.98 Yes 27 0.61 Yes -27 0.67 Yes 43 81.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 152605320 - NM_033071 SYNE1 1 33.25 6.42 69 4.51 76.73 16 4.69 No 50 -3.99 No 18 0.42 Yes -18 0.78 Yes 52 75.38 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 64340134 + NM_015180 SYNE2 1 0.36 0.15 11 11.81 87.15 29 6.4 Yes 16 1.64 Yes 28 0.93 Yes -28 0.95 Yes 42 97.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 64394319 + NM_015180 SYNE2 1 0.2 0.28 18 0.7 62.51 45 6.25 Yes 52 1.45 Yes 0 0 No -44 0.62 No 26 78.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 64396520 + NM_015180 SYNE2 1 0.61 0.78 31 9.26 87.79 34 7.34 Yes 75 -3.33 No 0 0 No -33 0.53 No 37 62.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64408615 + NM_015180 SYNE2 1 0.12 0.19 10 -1.33 65.49 18 4.69 No 24 0.6 No 0 0 No -40 0.7 Yes 30 78.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64412365 + NM_015180 SYNE2 1 0.08 0.18 11 1.72 0 46 5.84 Yes 18 -0.68 No 0 0 No -30 0.68 Yes 25 72.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64422831 + NM_015180 SYNE2 1 0.84 1.04 44 9.16 79.98 25 7.06 Yes 12 1.03 Yes 0 0 No -24 0.92 Yes 46 90.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64422834 + NM_015180 SYNE2 1 0.2 0.26 15 5.24 88.49 28 7.27 Yes 15 1.03 Yes 0 0 No -27 0.92 Yes 43 91.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64423147 + NM_015180 SYNE2 1 0.2 0.31 15 4.48 84.04 35 6.17 Yes 7 0.71 No 29 0.69 Yes -29 0.38 No 41 44.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 64453152 + NM_015180 SYNE2 1 0.21 0.36 16 4.54 79.53 13 6.9 Yes 0 1.85 Yes 23 0.9 Yes -32 0.58 No 46 43.28 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 64455562 + NM_015180 SYNE2 1 1.25 1.06 43 -1.49 0 21 4.99 No 4 0.6 No 0 0 No -39 0.47 No 50 66.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64469416 + NM_015180 SYNE2 1 0.11 0.13 8 2.83 0 16 4.1 No 25 1.06 Yes 23 0.86 Yes -37 0.94 Yes 33 97.57 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 64471523 + NM_015180 SYNE2 1 0.48 0.76 38 8.71 84.91 17 5.56 Yes 4 1.06 Yes 0 0 No -20 0.74 Yes 50 69.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64473239 + NM_015180 SYNE2 1 0.07 0.14 7 5.66 76.49 34 7.24 Yes 21 1.79 Yes 0 0 No -33 0.6 No 31 72.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 64486702 + NM_015180 SYNE2 1 0.12 0.14 8 -1.5 0 28 5.57 Yes 71 0.64 No 24 0.51 Yes -10 0.33 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 64491828 + NM_015180 SYNE2 1 1.25 1.74 55 3.57 66.59 47 6.1 Yes 48 -1.35 No 22 0.83 Yes -29 0.45 No 24 63.86 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 64492677 + NM_015180 SYNE2 1 0.11 0.13 8 4.45 66.25 56 7.72 Yes 43 0.66 No 0 0 No -25 0.33 No 39 52.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64515287 + NM_015180 SYNE2 1 0.39 0.57 27 6.64 86.25 35 5.61 Yes 71 0.79 Yes 0 0 No -34 0.78 Yes 36 85.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64522107 + NM_015180 SYNE2 1 1.06 1.28 50 4.74 84.41 25 7.59 Yes 12 1.4 Yes 0 0 No -24 0.58 No 46 66.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 64522639 + NM_015180 SYNE2 1 0.15 0.18 12 4.52 81.86 16 5.29 No 3 0.47 No 26 0.89 Yes -24 0.68 Yes 46 65.21 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 64522919 + NM_015180 SYNE2 1 0.24 0.32 18 3.02 0 15 3.71 No 47 -3.3 No 0 0 No -20 0.94 Yes 50 86.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64547305 + NM_015180 SYNE2 1 0.07 0.1 7 4.24 85.51 24 6.26 Yes 3 0.63 No 0 0 No -23 0.73 Yes 47 68.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 64549141 + NM_015180 SYNE2 1 1.83 2.01 62 0.61 75.67 20 6.06 Yes 7 0.64 No 0 0 No -27 0.26 No 44 31.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64555807 + NM_015180 SYNE2 1 0.18 0.17 9 6.27 80.98 27 3.8 No 22 0.05 No 0 0 No -26 0.96 Yes 44 96.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64565111 + NM_015180 SYNE2 1 0.61 0.65 33 5.76 77 31 5.2 No 29 0.55 No 0 0 No -30 0.47 No 40 66.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64565245 + NM_015180 SYNE2 1 0.45 0.56 28 3.79 73.23 53 6.98 Yes 40 1.13 Yes 0 0 No -23 0.46 No 34 51.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 64593833 + NM_015180 SYNE2 1 0.1 0.11 8 -4.19 47.71 34 7.07 Yes 21 0.63 No 0 0 No -33 0.35 No 29 20.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64596503 + NM_015180 SYNE2 1 0.16 0.22 13 -3.01 0 40 5.22 No 35 1.19 Yes 0 0 No -43 0.83 Yes 27 94.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64606667 + NM_015180 SYNE2 1 0.26 0.35 17 -2.08 0 12 4.24 No 29 1.82 Yes 0 0 No -41 0.88 Yes 29 94.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64630872 + NM_015180 SYNE2 1 0.22 0.15 10 6.35 86.67 30 4.97 No 53 0.72 No 0 0 No -29 0.65 No 41 85.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 64636950 + NM_015180 SYNE2 1 0.48 0.51 27 1.96 0 64 7.48 Yes 12 1.34 Yes 0 0 No -25 0.75 Yes 45 79.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64656708 + NM_015180 SYNE2 1 0.72 0.44 24 6.27 84.5 28 6.62 Yes -3 -1.9 No 0 0 No -27 0.7 Yes 43 67.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 64669555 + NM_015180 SYNE2 1 1.13 1.08 44 4.6 88.53 25 5.2 No 71 1 Yes 24 0.95 Yes -24 0.83 Yes 46 84.16 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 64674675 + NM_015180 SYNE2 1 0.1 0.11 7 13.25 80.8 21 5.99 Yes 38 0.81 Yes 20 0.59 Yes -20 0.74 Yes 50 80.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 64674835 + NM_015180 SYNE2 1 0.17 0.21 15 3.31 75.35 71 9.44 Yes 58 0.93 Yes 0 0 No -19 0.6 No 18 78.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 64679104 + NM_015180 SYNE2 1 0.14 0.14 8 5.77 83.95 29 6.06 Yes 5 1.06 Yes 0 0 No -23 0.84 Yes 47 70.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64682003 + NM_015180 SYNE2 1 8.63 6.96 71 11.17 93.89 18 5.72 Yes 70 1.15 Yes 26 0.67 Yes -26 0.79 Yes 44 84.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 64684493 + NM_015180 SYNE2 1 0.1 0.1 7 6.87 74.05 39 6.63 Yes 26 0.91 Yes 0 0 No -38 0.92 Yes 32 90.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64688251 + NM_015180 SYNE2 1 11.16 8.69 72 8.11 86.89 30 6 Yes 66 -3.63 No 29 0.61 Yes -25 0.62 No 45 57.46 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 64688305 + NM_015180 SYNE2 1 0.63 0.49 24 2.15 0 15 4.43 No 17 1.74 Yes 0 0 No -29 0.73 Yes 41 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64691716 + NM_015180 SYNE2 1 108.62 45.14 72 1.85 85.83 24 5 No 11 1.62 Yes 26 0.89 Yes -23 0.79 Yes 47 91.74 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 95875442 - NM_152592 SYNE3 1 0.49 0.47 19 12.85 95.69 24 5.48 No 11 0.92 Yes 0 0 No -23 0.92 Yes 47 93.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95878153 - NM_152592 SYNE3 1 0.6 0.49 26 9.52 76.49 31 6.36 Yes 18 0.89 Yes 0 0 No -37 0.67 Yes 33 82.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95884502 - NM_152592 SYNE3 1 0.3 0.29 16 6.41 82.76 21 4.69 No 8 0.16 No 0 0 No -20 0.95 Yes 50 96.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 95899802 - NM_152592 SYNE3 1 1.03 0.97 43 8.97 91.5 24 4.74 No 11 0.43 No 0 0 No -23 0.81 Yes 47 70.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 95903304 - NM_152592 SYNE3 1 59.98 32.71 69 4.51 86.08 25 4.9 No 37 -2.35 No 27 0.93 Yes -19 0.43 No 51 39.68 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 95905491 - NM_152592 SYNE3 1 1.82 1.74 51 0.54 0 12 4.24 No 21 1.07 Yes 0 0 No -33 0.52 No 37 57.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 95908192 - NM_152592 SYNE3 1 0.24 0.15 11 5.23 79.46 17 5.42 No 4 1.71 Yes 0 0 No -22 0.5 No 48 64.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 95912425 - NM_152592 SYNE3 1 0.25 0.25 15 2.46 0 27 5.29 No 41 1.14 Yes 0 0 No -26 0.94 Yes 44 94.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95915954 - NM_152592 SYNE3 1 1.68 1.96 54 5.34 85.33 22 5.29 No 9 0.63 No 0 0 No -21 0.94 Yes 49 94.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 95918020 - NM_152592 SYNE3 1 0.17 0.1 7 5.1 73.7 25 6.4 Yes 48 0.61 No 0 0 No -24 0.8 Yes 46 71.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 95918820 - NM_152592 SYNE3 1 1.03 0.78 34 0.42 0 16 4.47 No 3 1.26 Yes 0 0 No -15 0.77 Yes 55 89.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95919753 - NM_152592 SYNE3 1 0.3 0.22 11 2.05 78.22 36 7.35 Yes 23 1.25 Yes 0 0 No -35 0.58 No 35 71.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 95923117 - NM_152592 SYNE3 1 0.3 0.28 15 6.61 0 17 4.57 No 13 1.57 Yes 0 0 No -25 0.64 No 45 79.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 95923673 - NM_152592 SYNE3 1 1.51 0.78 34 1.23 69.54 22 7.19 Yes 9 1.07 Yes 0 0 No -31 0.94 Yes 39 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 95934361 - NM_152592 SYNE3 1 0.39 0.32 18 6.03 79.05 15 5.33 No 54 0.34 No 0 0 No -22 0.57 No 48 77.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 76166692 + NM_004710 SYNGR2 1 0.03 0.19 12 -0.17 82.27 23 5 No 62 -4.26 No 22 0.94 Yes -22 0.88 Yes 48 65.87 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 76167389 + NM_004710 SYNGR2 1 0.01 0.13 8 11.65 86.94 39 6.48 Yes 47 -0.66 No 0 0 No -23 0.51 No 32 40.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76167640 + NM_004710 SYNGR2 1 0.02 0.25 15 6.65 75.63 53 7.67 Yes 61 2.25 Yes 0 0 No -42 0.61 No 28 79.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 76167846 + NM_004710 SYNGR2 1 0.3 4.24 72 6.65 76.57 37 4.98 No 74 -1.28 No 0 0 No -29 0.58 No 41 59.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76167931 + NM_004710 SYNGR2 1 0.1 1.43 51 7.08 84.1 43 7.17 Yes 30 1.95 Yes 0 0 No -24 0.65 No 46 60.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 34004131 - NM_001160306 SYNJ1 1 2.69 0.51 21 5.62 77.56 21 4.74 No -3 0.95 Yes 21 0.73 Yes -26 0.64 No 44 65.34 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 34043170 - NM_001160306 SYNJ1 1 0.97 0.19 11 6.57 72.31 30 6.13 Yes 17 1.16 Yes 0 0 No -20 0.53 No 41 77.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 34048666 - NM_001160306 SYNJ1 1 1.09 0.19 12 7.35 73.72 35 9.71 Yes 22 1.54 Yes 34 0.86 Yes -34 0.77 Yes 36 88.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 34065588 - NM_001160306 SYNJ1 1 2.55 0.56 28 9.18 79.6 13 4.4 No 0 1.06 Yes 0 0 No -32 0.35 No 47 68.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 158483086 + NM_003898 SYNJ2 1 1.24 0.15 9 5.31 79.91 22 8 Yes 75 2.26 Yes 24 0.42 Yes -21 0.57 No 46 60.27 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 70847913 - NM_001202547 SYNJ2BP-COX16 1 1.6 0.68 34 5.93 85.26 32 8.7 Yes 19 1.28 Yes 0 0 No -24 0.58 No 39 72.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 70847916 - NM_001202547 SYNJ2BP-COX16 1 1.41 0.58 32 6.47 80.03 29 8.55 Yes 16 1.3 Yes 0 0 No -28 0.53 No 42 75.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 70848946 - NM_001202547 SYNJ2BP-COX16 1 1.26 0.49 26 2.82 0 39 8.31 Yes 46 1.19 Yes 0 0 No -35 0.62 No 35 67.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 70858348 - NM_001202547 SYNJ2BP-COX16 1 0.38 0.13 9 6.3 76.16 23 6.13 Yes 10 1.09 Yes 0 0 No -23 0.58 No 47 70.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 35880748 - NM_001163545 SYNRG 1 0.14 0.14 9 2.71 0 31 7.81 Yes 18 1.37 Yes 0 0 No -30 0.68 Yes 40 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 35889954 - NM_001163545 SYNRG 1 1.09 0.99 43 9.02 78.66 25 4.99 No 12 0.19 No 24 0.55 Yes -24 0.86 Yes 46 83.06 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 35900583 - NM_001163545 SYNRG 1 2.26 2.1 61 9.27 88.55 23 5.39 No 74 1.03 Yes 23 0.64 Yes -22 0.59 No 48 66.17 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 35901360 - NM_001163545 SYNRG 1 1.25 1.08 41 7.61 89.86 36 6.37 Yes 54 1.01 Yes 0 0 No -35 0.51 No 35 59.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 35902530 - NM_001163545 SYNRG 1 25.71 18.39 72 8.02 89.73 37 6.16 Yes 70 -2.75 No 33 0.33 Yes -36 0.64 No 34 53.15 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 35902533 - NM_001163545 SYNRG 1 27.18 19.24 72 7.14 87.93 34 5.92 Yes 67 -2.74 No 33 0.33 Yes -33 0.76 Yes 37 66.66 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 35902662 - NM_001163545 SYNRG 1 0.65 0.46 28 0.1 0 9 3.87 No 20 1.03 Yes 0 0 No -32 0.91 Yes 38 94.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 35916750 - NM_001163545 SYNRG 1 0.1 0.13 7 8.85 79.74 23 5.48 No 10 0.93 Yes 0 0 No -22 0.84 Yes 48 74.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 35917101 - NM_001163545 SYNRG 1 0.44 0.51 25 8.85 84.54 23 8.77 Yes 10 1.86 Yes 0 0 No -22 0.87 Yes 48 87.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 35929023 - NM_001163545 SYNRG 1 0.22 0.25 13 -3.31 0 40 5.73 Yes 61 1.45 Yes 25 0.66 Yes -25 0.47 No 37 43.75 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 35937712 - NM_001163545 SYNRG 1 728.3 62.92 72 9.06 85.91 23 6.58 Yes 3 0.97 Yes 27 0.5 Yes -27 0.33 No 41 52.41 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 35939531 - NM_001163545 SYNRG 1 337.39 30.31 72 10.28 91.13 62 12.7 Yes 49 0.82 Yes 22 0.83 Yes -22 0.93 Yes 48 91.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 35944864 - NM_001163545 SYNRG 1 0.22 0.26 17 2.23 0 36 6.39 Yes 45 -3.42 No 0 0 No -24 0.65 No 46 50.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 35946654 - NM_001163545 SYNRG 1 0.63 0.72 30 5 0 27 5.57 Yes 14 0.56 No 0 0 No -26 0.59 No 44 70.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 35956392 - NM_001163545 SYNRG 1 323.15 49.92 72 5.33 90.73 28 6.91 Yes 6 1.16 Yes 27 0.7 Yes -22 0.56 No 43 66.27 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 105732384 - NM_006754 SYPL1 1 0.06 0.11 8 -11.53 0 32 6.62 Yes 19 0.56 No 0 0 No -31 0.7 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105733116 - NM_006754 SYPL1 1 1.79 3.25 60 4.74 84.41 28 6.32 Yes 15 1.11 Yes 27 0.9 Yes -27 0.9 Yes 43 93.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 105738225 - NM_006754 SYPL1 1 0.26 0.56 30 8.42 88.54 47 6.77 Yes 24 0.86 Yes 0 0 No -23 0.7 Yes 47 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105751837 - NM_006754 SYPL1 1 0.18 0.43 19 -0.83 65.44 43 6.45 Yes 68 0.09 No 0 0 No -22 0.68 Yes 48 59.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 43994186 + NM_001197129 SYS1 1 0.16 0.11 7 3.66 84.51 13 5 No 71 -2.59 No 0 0 No -24 0.45 No 51 23.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155836425 + NM_152280 SYT11 1 0.67 0.4 22 8.66 81.57 71 7.45 Yes 34 0.52 No 0 0 No -25 0.39 No 24 52.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 155850293 + NM_152280 SYT11 1 0.73 0.39 22 0.18 72.99 26 6.4 Yes 13 1.84 Yes 0 0 No -25 0.97 Yes 45 96.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27671791 + NM_032872 SYTL1 1 0.25 0.14 9 -2.12 0 24 6.13 Yes 11 1.94 Yes 0 0 No -23 0.61 No 42 63.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 27677299 + NM_032872 SYTL1 1 0.32 0.17 9 7.62 85.73 18 4.9 No 18 1.58 Yes 0 0 No -36 0.46 No 34 39.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 27677952 + NM_032872 SYTL1 1 0.43 0.13 9 -2.21 0 12 3.71 No 12 0.81 Yes 18 0.93 Yes -24 0.83 Yes 46 72.27 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 159086418 + NM_001009991 SYTL3 1 0.65 0.18 12 -5.02 82.25 24 6.63 Yes 11 1.3 Yes 23 0.87 Yes -23 0.85 Yes 47 68.17 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 159086418 + NM_001009991 SYTL3 1 1.08 0.38 18 -5.02 82.25 24 6.63 Yes 11 1.3 Yes 23 0.87 Yes -23 0.85 Yes 47 68.17 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 159121333 + NM_001009991 SYTL3 1 1.52 0.36 21 6.2 87.19 31 5.45 No 30 -1.7 No 0 0 No -30 0.27 No 41 25.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 159166626 + NM_001009991 SYTL3 1 0.86 0.24 15 3.33 71.15 28 6.76 Yes 45 0.71 No 0 0 No -27 0.87 Yes 43 87.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 64895949 - NM_032431 SYVN1 1 0.11 0.14 9 -5.26 0 15 4.58 No 65 -1.35 No 0 0 No -31 0.66 No 35 59.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64895976 - NM_032431 SYVN1 1 0.76 0.92 38 5.81 82.09 16 4.69 No 65 -2.91 No 23 0.74 Yes -19 0.66 No 55 18.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 64896263 - NM_032431 SYVN1 1 0.16 0.26 12 3.01 81.14 23 6.24 Yes 49 0.87 Yes 25 0.61 Yes -25 0.56 No 48 52.38 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 64896309 - NM_032431 SYVN1 1 4.54 6.13 72 7.08 89.56 16 4.45 No 3 0.88 Yes 0 0 No -28 0.61 No 42 74.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 64897648 - NM_032431 SYVN1 1 134.79 84.25 72 6.86 86.54 21 6.49 Yes 8 2.07 Yes 24 0.91 Yes -24 0.77 Yes 46 72.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64898274 - NM_032431 SYVN1 1 0.08 0.13 7 7.75 80.07 31 5.57 Yes 35 2.28 Yes 30 0.73 Yes -30 0.68 Yes 40 77.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64898527 - NM_032431 SYVN1 1 0.17 0.4 22 0.96 70.48 20 5.1 No 49 0.18 No 25 0.94 Yes -21 0.62 No 51 54.41 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 64898665 - NM_032431 SYVN1 1 1.2 2.47 63 4.73 0 50 7.64 Yes 5 2.14 Yes 0 0 No -21 0.46 No 26 60.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 64899780 - NM_032431 SYVN1 1 0.6 1.81 57 1.54 84.79 39 7.13 Yes 66 2.18 Yes 23 0.69 Yes -23 0.56 No 32 81.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 64899821 - NM_032431 SYVN1 1 0.05 0.14 8 -26.62 0 38 8 Yes 25 2.17 Yes 35 0.9 Yes -37 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 64900275 - NM_032431 SYVN1 1 0.07 0.17 10 1.84 0 21 4.58 No 43 -4.04 No 27 0.96 Yes -20 0.78 Yes 50 70.23 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 64900679 - NM_032431 SYVN1 1 0.1 0.14 9 5.47 74.69 33 6.24 Yes 64 0.68 No 32 0.38 Yes -36 0.68 Yes 34 76.86 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 64900741 - NM_032431 SYVN1 1 0.19 0.24 15 2.1 70.68 15 5 No 2 0.26 No 26 0.81 Yes -22 0.39 No 56 57.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 16719725 + NR_073501 SZRD1 1 137.83 239.83 72 7.69 92.29 27 5.66 Yes 14 0.47 No 23 0.76 Yes -26 0.71 Yes 44 76.87 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 16719725 + NR_073501 SZRD1 1 56.68 100.24 72 7.69 92.29 27 5.66 Yes 14 0.47 No 23 0.76 Yes -26 0.71 Yes 44 76.87 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 16721505 + NR_073501 SZRD1 1 0.29 1.85 54 8.74 92.63 31 6.62 Yes 64 0.28 No 29 0.81 Yes -30 0.8 Yes 40 75.67 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 43859709 + NM_015284 SZT2 1 1.85 0.71 32 7.76 87.66 33 6.93 Yes 20 2.09 Yes 0 0 No -32 0.86 Yes 38 93.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43860667 + NM_015284 SZT2 1 0.36 0.13 9 7.12 91.25 22 5.08 No 9 0.17 No 0 0 No -21 0.93 Yes 49 92.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43869277 + NM_015284 SZT2 1 3.27 1.58 54 0.3 0 15 3.87 No 27 2.38 Yes 33 0.91 Yes -39 0.86 Yes 31 92.18 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 43871953 + NM_015284 SZT2 1 0.34 0.1 7 7.04 86.46 30 7.81 Yes 17 1.49 Yes 29 0.91 Yes -29 0.93 Yes 41 95.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 43871953 + NM_015284 SZT2 1 6.31 1.74 54 7.04 86.46 30 7.81 Yes 17 1.49 Yes 29 0.91 Yes -29 0.93 Yes 41 95.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 43875163 + NM_015284 SZT2 1 7.09 2.01 61 8.1 88.57 24 4.49 No 11 0.02 No 23 0.39 Yes -23 0.61 No 46 58.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 43886783 + NM_015284 SZT2 1 0.33 0.14 10 2.84 77.28 28 5.29 No 15 -0.4 No 0 0 No -27 0.89 Yes 43 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43886807 + NM_015284 SZT2 1 0.56 0.22 13 3.06 79.41 27 5.74 Yes 3 1.15 Yes 22 0.92 Yes -26 0.85 Yes 44 82.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 43886922 + NM_015284 SZT2 1 0.28 0.13 9 5.9 77.91 23 4.73 No 10 1.06 Yes 0 0 No -22 0.74 Yes 48 80.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43888491 + NM_015284 SZT2 1 1.52 0.51 22 5.25 77.33 33 6.63 Yes 58 2.26 Yes 0 0 No -21 0.71 Yes 49 79.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43892733 + NM_015284 SZT2 1 1.24 0.33 19 -3.66 0 12 4 No 16 1.41 Yes 0 0 No -41 0.56 No 42 73.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 43896624 + NM_015284 SZT2 1 2.63 0.58 33 6.56 0 24 6.4 Yes 11 2.07 Yes 0 0 No -31 0.58 No 47 73.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 43897732 + NM_015284 SZT2 1 14.9 3.94 70 6.04 79.81 65 7.65 Yes 5 2.38 Yes 0 0 No -35 0.71 Yes 35 90.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43897821 + NM_015284 SZT2 1 0.64 0.19 13 4.68 89.08 19 5.02 No 6 1.42 Yes 0 0 No -18 0.46 No 48 57.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 43898015 + NM_015284 SZT2 1 1.8 0.51 26 7.92 86.6 25 5.39 No 12 1.61 Yes 0 0 No -24 0.88 Yes 46 92.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43899704 + NM_015284 SZT2 1 4.11 0.71 36 2.87 74.75 37 6.92 Yes 24 0.48 No 0 0 No -36 0.62 No 34 71.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 43900770 + NM_015284 SZT2 1 0.55 0.15 10 6.07 78.02 28 6.07 Yes 3 1.72 Yes 0 0 No -27 0.64 No 43 67.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 43904664 + NM_015284 SZT2 1 0.31 0.13 8 8.86 86.13 37 6.38 Yes 50 0.36 No 0 0 No -25 0.88 Yes 45 93.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43906951 + NM_015284 SZT2 1 0.68 0.19 11 1.7 70.24 25 7.62 Yes 75 -4.86 No 0 0 No -24 0.63 No 46 67.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 43907738 + NM_015284 SZT2 1 0.69 0.25 15 10.47 80.77 27 7.81 Yes 61 -1.33 No 0 0 No -27 0.81 Yes 43 73.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43907907 + NM_015284 SZT2 1 0.46 0.15 9 4.14 83.16 20 4.99 No 48 0.83 Yes 25 0.65 Yes -22 0.71 Yes 48 52.37 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 43909221 + NM_015284 SZT2 1 0.56 0.11 7 7.91 86.63 25 5.67 Yes 12 1.93 Yes 0 0 No -24 0.88 Yes 46 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43915813 + NM_015284 SZT2 1 1.1 0.32 19 4.8 72.5 16 5.45 No 3 2.08 Yes 0 0 No -19 0.79 Yes 51 88.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43915834 + NM_015284 SZT2 1 0.45 0.14 9 5.07 70.18 24 5.48 No 24 2.06 Yes 0 0 No -23 0.62 No 47 51.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 43915982 + NM_015284 SZT2 1 0.82 0.29 17 8.61 81.02 42 6.72 Yes 29 1.6 Yes 30 0.95 Yes -41 0.54 No 29 79.34 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 43916509 + NM_015284 SZT2 1 0.95 0.31 18 4.71 73.07 16 6 Yes 3 1.2 Yes 0 0 No -29 0.81 Yes 41 82.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 39810884 + NM_006116 TAB1 1 0.52 0.13 9 6.85 93.89 24 6.46 Yes 11 0.21 No 23 0.78 Yes -23 0.93 Yes 47 92.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 39816240 + NM_006116 TAB1 1 0.28 0.15 10 7.76 88.24 18 6.78 Yes 50 -2.23 No 0 0 No -27 0.68 Yes 39 78.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 39817721 + NM_006116 TAB1 1 0.33 0.19 12 11.45 93.69 37 8.06 Yes 24 2.82 Yes 20 0.67 Yes -36 0.92 Yes 34 94.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 149667613 + NM_015093 TAB2 1 1.07 0.24 14 3.01 0 34 6.89 Yes 21 1.13 Yes 33 0.45 Yes -32 0.65 No 38 59.57 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 149668306 + NM_015093 TAB2 1 2.76 0.72 35 7.07 80.88 24 5.89 Yes 30 1.15 Yes 23 0.87 Yes -23 0.77 Yes 47 78.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 149701069 + NM_015093 TAB2 1 1.37 1.92 58 6.56 86.56 29 7.03 Yes 29 1.21 Yes 28 0.94 Yes -28 0.85 Yes 42 92.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 30864189 - NM_152787 TAB3 1 0.87 0.51 24 8.24 88.66 23 5.39 No 21 0.2 No 22 0.73 Yes -22 0.54 No 42 43.57 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 30864209 - NM_152787 TAB3 1 0.36 0.19 9 -1.25 0 14 3.83 No 27 -3 No 22 0.73 Yes -34 0.29 No 56 43.48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 30868828 - NM_152787 TAB3 1 0.18 0.11 7 4.58 84.41 39 7.42 Yes 26 1.69 Yes 0 0 No -38 0.81 Yes 32 80.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 30872404 - NM_152787 TAB3 1 0.68 0.26 16 6.04 68.98 26 5.16 No 41 0.62 No 0 0 No -20 0.39 No 50 53.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 30873534 - NM_152787 TAB3 1 0.31 0.17 11 2.24 77.87 26 7.32 Yes 13 1.26 Yes 0 0 No -25 0.86 Yes 45 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 30873537 - NM_152787 TAB3 1 0.65 0.31 20 2.39 74.4 23 7.11 Yes 10 1.26 Yes 0 0 No -22 0.81 Yes 48 81.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 30874050 - NM_152787 TAB3 1 0.63 0.33 19 6.15 84.35 73 8.82 Yes 60 0.65 No 0 0 No -31 0.76 Yes 39 66.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 30878366 - NM_152787 TAB3 1 0.17 0.11 7 6.97 91.87 14 5.09 No 46 0.79 Yes 0 0 No -30 0.59 No 51 64.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 30901858 - NM_152787 TAB3 1 3.92 0.78 32 5.76 79.81 18 5.01 No 5 1.54 Yes 0 0 No -25 0.46 No 40 44.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 38655000 + NM_006283 TACC1 1 0.48 1.11 43 10.93 93.57 37 9.74 Yes 24 2.55 Yes 0 0 No -36 0.86 Yes 34 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38681507 + NM_006283 TACC1 1 0.27 0.88 35 3.45 80.91 57 8.04 Yes 6 1.15 Yes 18 0.53 Yes -44 0.43 No 26 74.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 38682113 + NM_006283 TACC1 1 0.05 0.18 9 7.58 90.56 26 6.56 Yes 67 1.52 Yes 0 0 No -30 0.59 No 40 60.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 38684656 + NM_006283 TACC1 1 0.1 0.4 22 5.85 80.29 40 7.33 Yes 27 0.73 No 23 0.66 Yes -29 0.77 Yes 31 87.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 38684661 + NM_006283 TACC1 1 0.12 0.54 26 -0.6 0 45 7.58 Yes 32 0.72 No 23 0.66 Yes -34 0.68 Yes 26 89.1 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 38698201 + NM_006283 TACC1 1 0.02 0.14 8 6.18 74.71 28 6.57 Yes 34 -1.64 No 0 0 No -27 0.84 Yes 43 84.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 38698831 + NM_006283 TACC1 1 0.15 0.81 38 4.76 71.47 29 6.43 Yes 39 0.81 Yes 0 0 No -28 0.85 Yes 42 86.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 38699807 + NM_006283 TACC1 1 1.83 9.44 72 1.78 67.99 37 6.54 Yes 46 0.3 No 25 0.75 Yes -28 0.85 Yes 42 68.93 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr4 1725428 + NM_006342 TACC3 1 0.06 0.17 11 1.35 58.74 22 5.08 No -4 0.41 No 22 0.91 Yes -22 0.69 Yes 62 35.69 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr4 1729421 + NM_006342 TACC3 1 0.08 0.15 11 0.72 63.82 32 5.92 Yes 24 1.7 Yes 25 0.74 Yes -31 0.92 Yes 39 82.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 1729441 + NM_006342 TACC3 1 0.1 0.22 12 -1.62 0 12 3.95 No 44 1.69 Yes 0 0 No -26 0.76 Yes 44 61.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 1732901 + NM_006342 TACC3 1 0.11 0.19 14 -14.48 76.1 23 5.92 Yes 10 1.52 Yes 0 0 No -22 0.78 Yes 48 70.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1737005 + NM_006342 TACC3 1 1.32 2.69 60 4.75 0 9 3.87 No 5 1.12 Yes 22 0.79 Yes -17 0.51 No 46 62.46 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 1740074 + NM_006342 TACC3 1 0.12 0.19 12 3.23 0 20 4.58 No 21 -2.13 No 0 0 No -19 0.59 No 51 60.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 1741425 + NM_006342 TACC3 1 0.83 1.57 48 -6.3 56.48 19 6.74 Yes 6 0.45 No 21 0.84 Yes -18 0.67 Yes 52 82.39 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 1742208 + NM_006342 TACC3 1 0.31 0.79 37 7.72 82.22 19 5.48 No 6 1.55 Yes 0 0 No -18 0.76 Yes 52 82.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1742554 + NM_006342 TACC3 1 0.1 0.24 14 -2.38 84.57 27 7.68 Yes 14 1.54 Yes 0 0 No -26 0.61 No 38 75.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 1742558 + NM_006342 TACC3 1 0.1 0.19 11 -10.53 0 10 3.87 No 18 1.55 Yes 0 0 No -36 0.67 Yes 34 76.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1745121 + NM_006342 TACC3 1 0.15 0.35 18 5.87 79.7 33 6.67 Yes 20 1.17 Yes 0 0 No -28 0.42 No 42 65.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 61681896 + NM_016360 TACO1 1 1.77 1.78 55 2.37 71.65 35 7.33 Yes 22 2.06 Yes 0 0 No -34 0.97 Yes 36 97.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 61684708 + NM_016360 TACO1 1 0.25 0.22 14 -2.65 66.24 28 5.24 No 24 0.58 No 0 0 No -27 0.87 Yes 43 71.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 61685395 + NM_016360 TACO1 1 0.73 0.93 37 7.19 75.46 35 6.08 Yes 48 0.5 No 0 0 No -24 0.63 No 36 68.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 166831645 - NM_053053 TADA1 1 0.51 0.38 18 1.82 0 27 5.43 No 20 0.11 No 0 0 No -26 0.48 No 38 46.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 35775000 + NM_001488 TADA2A 1 0.23 0.19 10 3.27 0 42 8.17 Yes 29 1.97 Yes 0 0 No -47 0.62 No 23 63.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 35786449 + NM_001488 TADA2A 1 0.89 0.42 24 8.71 85.76 27 3.71 No 8 0.55 No 26 0.8 Yes -23 0.64 No 47 71.49 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 35796482 + NM_001488 TADA2A 1 0.96 0.83 38 2.15 83.57 29 4.98 No 53 0.57 No 27 0.49 Yes -22 0.52 No 48 69.62 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 35800609 + NM_001488 TADA2A 1 0.92 0.69 34 1.51 0 46 6.78 Yes 54 0.93 Yes 29 0.43 Yes -33 0.56 No 37 47.72 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 35802670 + NM_001488 TADA2A 1 1.33 1.29 53 0.67 0 9 3.87 No 5 0.85 Yes 0 0 No -33 0.62 No 37 72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 35807288 + NM_001488 TADA2A 1 0.34 0.24 12 8.32 94.29 33 5.73 Yes 64 0.95 Yes 0 0 No -32 0.45 No 47 56.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 35818662 + NM_001488 TADA2A 1 0.22 0.17 9 4.8 89.39 11 5 No 33 -2.75 No 0 0 No -57 0.37 No 54 48.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 35828655 + NM_001488 TADA2A 1 0.53 0.43 24 11.36 86.43 31 6.8 Yes 38 0.73 No 0 0 No -30 0.88 Yes 40 87.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 35833836 + NM_001488 TADA2A 1 1.13 0.88 33 9.23 94.07 27 6.08 Yes 14 1.75 Yes 0 0 No -26 0.77 Yes 44 86.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 7049681 + NM_152293 TADA2B 1 1.07 0.26 16 2.39 0 48 7.12 Yes 20 1.8 Yes 0 0 No -32 0.93 Yes 38 89.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 7050189 + NM_152293 TADA2B 1 0.57 0.14 9 5.39 70.76 29 4.24 No 55 0.91 Yes 0 0 No -28 0.9 Yes 42 85.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 7055792 + NM_152293 TADA2B 1 0.55 0.15 8 -1.76 0 28 8.67 Yes 15 1.68 Yes 0 0 No -27 0.85 Yes 43 91.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9826521 - NM_133480 TADA3 1 0.1 0.17 10 8.87 85.44 28 5.29 No 70 0.56 No 0 0 No -60 0.6 No 10 27.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9833170 - NM_133480 TADA3 1 0.4 0.69 33 5.35 0 11 4.12 No 36 0.78 Yes 23 0.68 Yes -28 0.42 No 22 57.56 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 70586916 + NR_104395 TAF1 1 1.06 0.35 21 7.8 79.14 23 5.74 Yes 42 0.99 Yes 0 0 No -22 0.67 Yes 48 39.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 70596862 + NR_104395 TAF1 1 10.76 5.64 70 9.43 86.54 26 6.92 Yes 28 0.42 No 34 0.68 Yes -25 0.83 Yes 45 85.35 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 70597483 + NR_104395 TAF1 1 0.83 0.38 17 6.44 90.41 27 6.32 Yes 37 1.08 Yes 0 0 No -26 0.71 Yes 44 80.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70600094 + NR_104395 TAF1 1 0.26 0.14 8 1.24 0 46 7.91 Yes 33 1.33 Yes 0 0 No -45 0.57 No 21 80.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 70603911 + NR_104395 TAF1 1 0.47 0.36 22 8.1 93.32 16 5.48 No 3 1.08 Yes 0 0 No -25 0.58 No 39 48.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 70609736 + NR_104395 TAF1 1 0.22 0.15 9 8.73 93.17 42 9.32 Yes 29 0.25 No 0 0 No -39 0.53 No 31 62.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 70612720 + NR_104395 TAF1 1 2.2 1.33 52 3.37 88.76 18 5.48 No 5 1.41 Yes 21 0.81 Yes -26 0.8 Yes 44 74.54 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 70617105 + NR_104395 TAF1 1 6.83 3.97 68 1.81 76.61 42 6.93 Yes 71 -3 No 24 0.36 Yes -27 0.41 No 43 53.24 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 70617108 + NR_104395 TAF1 1 0.28 0.18 11 -3.65 0 16 3.87 No 74 -2.99 No 0 0 No -30 0.37 No 40 57.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 70618810 + NR_104395 TAF1 1 0.23 0.14 8 10.74 86.16 37 7.83 Yes 60 -1.9 No 0 0 No -25 0.86 Yes 45 93.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 70640993 + NR_104395 TAF1 1 2.36 1.24 54 8.61 79.99 16 5.95 Yes 3 1.01 Yes 0 0 No -29 0.85 Yes 41 81.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70678999 + NR_104395 TAF1 1 37.55 15.32 72 8.07 87.21 27 6.97 Yes 42 1.33 Yes 30 0.73 Yes -30 0.81 Yes 40 91.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 6632549 - NM_006284 TAF10 1 0.06 0.32 19 5.6 73.44 19 6.08 Yes 70 -2.63 No 21 0.94 Yes -27 0.79 Yes 43 76.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 34848123 - NM_001270488 TAF11 1 0.15 0.22 15 -3.39 0 9 3.87 No 37 0.17 No 0 0 No -33 0.8 Yes 37 80.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 34848126 - NM_001270488 TAF11 1 0.26 0.32 21 -6.23 77.41 31 6.08 Yes 34 0.17 No 0 0 No -30 0.79 Yes 40 79.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 34848129 - NM_001270488 TAF11 1 0.28 0.39 22 1.48 84.15 28 5.83 Yes 31 0.18 No 0 0 No -27 0.79 Yes 43 78.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 34851258 - NM_001270488 TAF11 1 0.24 0.18 12 0.44 68.18 27 5.27 No 14 0.49 No 0 0 No -26 0.78 Yes 44 76.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 109608516 - NM_005645 TAF13 1 0.06 0.11 7 5.41 88.83 28 5.29 No 15 -0.34 No 0 0 No -27 0.57 No 43 57.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 109608541 - NM_005645 TAF13 1 0.49 0.82 36 4.3 84.41 54 6.75 Yes 67 0.22 No 0 0 No -25 0.58 No 32 70.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 109611617 - NM_005645 TAF13 1 1.31 1.35 52 2.45 0 31 6 Yes 18 0.61 No 0 0 No -30 0.94 Yes 40 92.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 34136975 + NM_139215 TAF15 1 0.17 0.63 30 7.54 79.94 47 6.93 Yes 34 0.41 No 23 0.18 Yes -31 0.46 No 24 60.84 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 34147149 + NM_139215 TAF15 1 0.03 0.18 11 -13.32 57.68 21 3.66 No 14 -2.61 No 20 0.45 Yes -42 0.81 Yes 28 83.91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 34149616 + NM_139215 TAF15 1 0.02 0.11 7 3.25 75.43 15 5.54 No 2 0.82 Yes 21 0.79 Yes -24 0.92 Yes 46 84.16 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 34149625 + NM_139215 TAF15 1 0.14 0.71 34 -1.7 0 13 4.24 No 11 0.82 Yes 21 0.79 Yes -33 0.89 Yes 37 79.06 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 34149648 + NM_139215 TAF15 1 0.12 0.64 32 -0.82 0 26 4.82 No 34 0.81 Yes 0 0 No -26 0.84 Yes 44 91.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34152434 + NM_139215 TAF15 1 0.14 0.58 30 2.88 65.39 31 6.36 Yes 7 1.17 Yes 0 0 No -30 0.66 No 40 83.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 34161543 + NM_139215 TAF15 1 0.03 0.14 8 3.13 68.07 48 5.36 No 54 1.28 Yes 32 0.91 Yes -28 0.74 Yes 42 58.2 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 34161769 + NM_139215 TAF15 1 0.07 0.4 22 4.74 84.41 31 6.56 Yes 69 -2.45 No 0 0 No -30 0.91 Yes 40 88.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 34169376 + NM_139215 TAF15 1 0.03 0.15 9 -4.29 0 9 3.87 No 10 1.07 Yes 0 0 No -29 0.86 Yes 41 90.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34173883 + NM_139215 TAF15 1 0.02 0.14 9 -7.4 0 10 4 No 20 1.82 Yes 28 0.72 Yes -32 0.84 Yes 38 27.94 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 222739868 - NM_001201536 TAF1A 1 5.68 0.99 41 10.52 79.76 32 6.11 Yes 9 1.65 Yes 0 0 No -31 0.74 Yes 39 89.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 222742758 - NM_001201536 TAF1A 1 0.65 0.14 10 -0.63 0 14 4.24 No 7 1.67 Yes 0 0 No -35 0.64 No 35 78.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 222742767 - NM_001201536 TAF1A 1 18.88 4 68 8.12 79.53 27 5.73 Yes -2 1.71 Yes 26 0.86 Yes -26 0.87 Yes 44 91.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 222753168 - NM_001201536 TAF1A 1 0.76 0.17 11 3.64 68.62 26 6 Yes 51 0.81 Yes 25 0.45 Yes -25 0.74 Yes 45 83.64 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 222753233 - NM_001201536 TAF1A 1 11.59 2.79 63 2.9 80.93 26 5.51 No 60 -4.39 No 25 0.75 Yes -25 0.74 Yes 45 86.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 222753233 - NM_001201536 TAF1A 1 0.95 0.24 16 2.9 80.93 26 5.51 No 60 -4.39 No 25 0.75 Yes -25 0.74 Yes 45 86.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 10051387 + NM_001318977 TAF1B 1 0.18 0.1 7 8.64 85.34 24 3.89 No 38 1.32 Yes 0 0 No -26 0.88 Yes 44 90.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 10059358 + NM_001318977 TAF1B 1 0.2 0.1 7 5.93 72.08 33 4.32 No 28 0.35 No 0 0 No -33 0.89 Yes 37 93.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 10069797 + NM_001318977 TAF1B 1 0.4 0.19 12 8.85 88.97 37 6.16 Yes 19 0.97 Yes 0 0 No -31 0.62 No 34 79.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 10073998 + NM_001318977 TAF1B 1 0.4 0.22 11 9.1 85.63 24 6.33 Yes 11 1.37 Yes 0 0 No -23 0.47 No 47 62.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 9984259 + NM_001318977 TAF1B 1 0.64 0.21 11 12.2 91.42 29 7 Yes 42 1.17 Yes 0 0 No -28 0.9 Yes 42 91.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 9986185 + NM_001318977 TAF1B 1 1.6 0.82 38 4.96 78.09 31 7.46 Yes 18 0.26 No 30 0.52 Yes -30 0.73 Yes 40 71.32 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 9992096 + NM_001318977 TAF1B 1 0.3 0.22 15 9.21 94.05 22 6.73 Yes 9 1.12 Yes 22 0.83 Yes -21 0.74 Yes 49 81.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 84215070 - NM_001243160 TAF1C 1 1.05 0.35 18 5.21 78.34 23 5.67 Yes 75 1.1 Yes 22 0.68 Yes -22 0.71 Yes 48 81.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 84215677 - NM_001243160 TAF1C 1 1.75 0.44 21 3.12 64.24 27 5.21 No -4 0.87 Yes 20 0.86 Yes -26 0.63 No 44 78.28 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 93469913 - NM_024116 TAF1D 1 0.05 0.11 8 -3.03 0 25 6.41 Yes 70 -2.94 No 28 0.79 Yes -33 0.43 No 37 50.61 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 93469986 - NM_024116 TAF1D 1 0.04 0.1 7 2.48 0 14 4.47 No 37 0.65 No 20 0.65 Yes -19 0.35 No 51 82.28 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 93469997 - NM_024116 TAF1D 1 0.08 0.25 14 -3.32 0 10 3.87 No 26 0.66 No 20 0.65 Yes -38 0.88 Yes 32 75.09 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 93470011 - NM_024116 TAF1D 1 0.16 0.4 20 6.63 77.94 25 6.85 Yes 12 0.67 No 20 0.65 Yes -24 0.92 Yes 46 87.25 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 93470402 - NM_024116 TAF1D 1 0.32 1.04 44 -4.22 0 25 6.95 Yes 12 0.25 No 0 0 No -24 0.94 Yes 46 83.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 93471486 - NM_024116 TAF1D 1 0.1 0.36 20 -0.46 74.62 18 4.69 No 37 1.21 Yes 23 0.79 Yes -23 0.67 Yes 52 62.07 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 93471607 - NM_024116 TAF1D 1 0.73 2.35 59 4.89 80.67 31 4.37 No -4 0.84 Yes 24 0.94 Yes -24 0.7 Yes 46 76.73 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 93471629 - NM_024116 TAF1D 1 0.11 0.39 20 0.98 73.38 24 5 No 11 0.83 Yes 24 0.94 Yes -23 0.81 Yes 47 80.25 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 93473590 - NM_024116 TAF1D 1 0.1 0.18 11 3.4 0 61 8.82 Yes 48 0.47 No 0 0 No -48 0.62 No 22 82.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 93474160 - NM_024116 TAF1D 1 0.08 0.14 9 8.37 91.48 22 6.04 Yes 38 0.29 No 0 0 No -24 0.59 No 46 66.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 120757277 - NM_003184 TAF2 1 10.16 7.81 72 5.25 77.92 26 6.4 Yes 13 0.91 Yes 25 0.88 Yes -25 0.86 Yes 45 91.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 120774013 - NM_003184 TAF2 1 0.66 0.82 34 9.08 92.17 28 5.2 No 65 0.21 No 27 0.76 Yes -27 0.69 Yes 43 44.63 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 120774785 - NM_003184 TAF2 1 0.11 0.13 7 6.39 82.99 31 5.02 No 74 0.78 Yes 18 0.49 Yes -30 0.89 Yes 40 82.2 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 120774842 - NM_003184 TAF2 1 0.1 0.11 7 2.07 0 10 4 No 31 0.83 Yes 0 0 No -29 0.56 No 41 58.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 120779396 - NM_003184 TAF2 1 0.25 0.25 16 9.68 86.01 25 5.59 Yes 12 1.13 Yes 34 0.34 Yes -24 0.55 No 46 80.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 120781154 - NM_003184 TAF2 1 0.19 0.22 12 10.25 92.74 31 5.74 Yes 63 0.78 Yes 0 0 No -20 0.51 No 50 69.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 120787051 - NM_003184 TAF2 1 0.43 0.5 24 6.38 77.08 30 5.39 No 34 0.51 No 0 0 No -22 0.64 No 36 38.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 120791387 - NM_003184 TAF2 1 0.25 0.15 9 3.83 66.71 23 5.37 No 56 -2.08 No 0 0 No -26 0.48 No 44 60.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 120794948 - NM_003184 TAF2 1 0.51 0.54 25 5.74 75.14 28 5.32 No 76 -5.96 No 0 0 No -23 0.45 No 43 71.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 120801138 - NM_003184 TAF2 1 0.14 0.11 8 -8.01 0 17 3.74 No 55 0.86 Yes 0 0 No -38 0.56 No 40 58.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 120807082 - NM_003184 TAF2 1 0.87 1.03 46 0.9 74.59 46 6.54 Yes 43 0.75 No 0 0 No -25 0.93 Yes 45 74.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 120807170 - NM_003184 TAF2 1 0.55 0.69 32 9.5 92.52 24 4.45 No 5 0.43 No 0 0 No -23 0.57 No 47 57.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 120807185 - NM_003184 TAF2 1 0.73 0.85 47 4.44 65.99 35 5.38 No 40 -3.97 No 0 0 No -28 0.41 No 45 39.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 120814099 - NM_003184 TAF2 1 0.33 0.17 11 7.82 83.72 41 6.22 Yes 1 1.14 Yes 0 0 No -24 0.39 No 46 52.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 120818639 - NM_003184 TAF2 1 0.15 0.13 8 -8.31 79.51 29 5.7 Yes 16 0.42 No 0 0 No -28 0.85 Yes 42 82.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 120830299 - NM_003184 TAF2 1 3.62 3 66 6.81 82.42 30 7.45 Yes 58 -1.93 No 0 0 No -26 0.9 Yes 44 88.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 7881343 + NM_031923 TAF3 1 0.23 0.15 9 7.65 91.4 29 6.67 Yes 16 1.38 Yes 0 0 No -28 0.94 Yes 42 96.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 7889592 + NM_031923 TAF3 1 0.62 0.4 19 8.52 86.88 21 5.66 Yes 8 1.16 Yes 0 0 No -20 0.69 Yes 50 80.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 8005885 + NM_031923 TAF3 1 5.48 3.69 71 1.77 76.31 41 8.19 Yes 28 1.42 Yes 0 0 No -34 0.58 No 36 85.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 8009020 + NM_031923 TAF3 1 0.23 0.13 9 4.91 69.26 51 7.23 Yes 5 0.53 No 0 0 No -38 0.58 No 32 63.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 60561801 - NM_003185 TAF4 1 0.21 0.11 7 10.68 91.61 33 5.79 Yes 40 0.34 No 0 0 No -32 0.48 No 38 48.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 60574185 - NM_003185 TAF4 1 0.55 0.33 22 -2.78 73.28 18 4.89 No -1 -1.44 No 28 0.68 Yes -43 0.43 No 59 52.48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 60581235 - NM_003185 TAF4 1 1.07 0.4 24 4.13 80.02 13 5.1 No 23 -2.22 No 0 0 No -23 0.52 No 49 63.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 60581813 - NM_003185 TAF4 1 0.54 0.38 20 0.67 79.13 30 6.71 Yes 17 2.39 Yes 0 0 No -29 0.92 Yes 41 93.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 60582804 - NM_003185 TAF4 1 0.8 0.49 27 7.56 85.21 16 5.66 Yes 53 -1.72 No 0 0 No -29 0.64 No 41 82.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 60583729 - NM_003185 TAF4 1 0.53 0.32 21 7.25 78.23 54 7.95 Yes 8 0.02 No 0 0 No -20 0.78 Yes 50 81.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 60587656 - NM_003185 TAF4 1 1.33 0.47 26 9.57 84.45 38 5.71 Yes 25 0.39 No 33 0.66 Yes -33 0.51 No 40 66.79 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 60589850 - NM_003185 TAF4 1 0.7 0.28 15 10.94 88.04 25 5.97 Yes 56 0.74 No 0 0 No -24 0.57 No 39 55.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 60637736 - NM_003185 TAF4 1 1.21 0.44 22 9.61 81.93 22 6.11 Yes 9 1.48 Yes 0 0 No -21 0.93 Yes 49 93.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 23845186 + NM_001293725 TAF4B 1 3.61 1.92 58 4.68 81.5 33 5.53 No 6 1.03 Yes 0 0 No -32 0.78 Yes 38 88.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 23847487 + NM_001293725 TAF4B 1 0.38 0.33 18 -3.37 0 18 4.05 No 39 1.87 Yes 0 0 No -45 0.65 No 25 77.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 23849141 + NM_001293725 TAF4B 1 0.14 0.14 9 6.01 80.44 30 5.83 Yes 41 0.25 No 0 0 No -29 0.94 Yes 41 94.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 23872506 + NM_001293725 TAF4B 1 0.16 0.15 8 7.79 89.4 23 4.8 No 10 0.1 No 0 0 No -22 0.85 Yes 48 92.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 23875158 + NM_001293725 TAF4B 1 12.82 6.5 71 8.6 89.74 28 6.63 Yes 15 1.07 Yes 27 0.9 Yes -27 0.84 Yes 43 93.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 23875241 + NM_001293725 TAF4B 1 1.46 0.76 33 0.69 64.81 60 7.12 Yes 39 1.35 Yes 0 0 No -51 0.93 Yes 19 93.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 23884734 + NM_001293725 TAF4B 1 2.56 1.29 49 10.89 98.19 19 6.78 Yes 6 2.02 Yes 0 0 No -22 0.53 No 42 59.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 23898041 + NM_001293725 TAF4B 1 0.19 0.13 9 3.97 84.95 57 7.52 Yes 67 0.05 No 0 0 No -33 0.9 Yes 37 88.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 23964797 + NM_001293725 TAF4B 1 0.27 0.18 10 10.33 88.08 28 5.53 No 6 0.08 No 0 0 No -27 0.5 No 43 68.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 23968074 + NM_001293725 TAF4B 1 2.08 1.36 51 -1.73 53.36 27 6.42 Yes 50 0.83 Yes 0 0 No -26 0.72 Yes 29 62.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 229733172 - NM_014409 TAF5L 1 0.22 0.13 8 5.42 88.42 39 6.56 Yes 39 0.68 No 0 0 No -30 0.45 No 40 60.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 229736216 - NM_014409 TAF5L 1 0.62 0.38 21 7.82 91.71 16 5.29 No 3 1.46 Yes 0 0 No -22 0.72 Yes 48 71.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229741941 - NM_014409 TAF5L 1 4 3.04 66 5.63 85.26 26 5.38 No 29 1.56 Yes 0 0 No -25 0.92 Yes 45 92.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 229742624 - NM_014409 TAF5L 1 0.55 0.44 22 11.79 95.89 21 7.14 Yes 8 0.77 Yes 20 0.78 Yes -29 0.57 No 41 63.83 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 229743583 - NM_014409 TAF5L 1 3.12 2.5 60 11.36 91.79 46 6.47 Yes 33 0.15 No 21 0.22 Yes -26 0.6 No 45 41.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 99705720 - NM_001190415 TAF6 1 0.15 0.17 11 7.55 86.54 13 6 Yes 0 2.54 Yes 0 0 No -57 0.38 No 15 75.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 62543860 + NM_006473 TAF6L 1 0.37 0.15 10 4.44 0 34 9.44 Yes 21 1.57 Yes 28 0.88 Yes -33 0.85 Yes 37 86.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 62546367 + NM_006473 TAF6L 1 10.22 3.21 66 10.17 83.32 23 5.39 No -4 -0.04 No 0 0 No -22 0.53 No 48 69.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 62546381 + NM_006473 TAF6L 1 0.32 0.13 8 -2.72 68.83 19 4.79 No 6 0.48 No 0 0 No -22 0.65 No 52 79.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 62546393 + NM_006473 TAF6L 1 1.04 0.32 19 3.77 0 16 4.58 No 22 -1.64 No 0 0 No -30 0.46 No 40 70.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 62549927 + NM_006473 TAF6L 1 1.57 0.83 37 5.84 81.01 26 5.38 No 23 -1.3 No 0 0 No -23 0.53 No 42 41.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62550219 + NM_006473 TAF6L 1 0.2 0.11 7 10.02 88.08 24 5.46 No 63 1.54 Yes 0 0 No -23 0.73 Yes 47 78.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42030923 + NM_138572 TAF8 1 0.61 0.35 19 7.87 92.91 20 6.63 Yes 7 1.34 Yes 26 0.52 Yes -26 0.39 No 44 57.04 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 42036241 + NM_138572 TAF8 1 0.81 0.53 25 6.85 78.67 20 5.92 Yes 50 1.54 Yes 19 0.61 Yes -30 0.65 No 51 75.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 42039084 + NM_138572 TAF8 1 1.35 0.75 33 12.17 88.27 52 8.06 Yes 47 0.98 Yes 37 0.17 Yes -37 0.46 No 29 71.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 42040644 + NM_138572 TAF8 1 0.2 0.1 7 5.12 85.02 19 7.07 Yes 6 1.26 Yes 0 0 No -18 0.72 Yes 52 85.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42044840 + NM_138572 TAF8 1 0.2 0.13 7 -9.11 71.84 36 7.33 Yes 23 1.05 Yes 0 0 No -35 0.5 No 26 68.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 42046164 + NM_138572 TAF8 1 0.44 0.31 16 6.72 88.89 31 6.12 Yes 22 0.52 No 0 0 No -30 0.72 Yes 40 77.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 42046203 + NM_138572 TAF8 1 2.66 1.81 52 3.88 70.84 47 5.89 Yes 34 1.04 Yes 0 0 No -33 0.69 Yes 37 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42047473 + NM_138572 TAF8 1 2.37 1.54 53 8.95 85.86 22 7.28 Yes 9 1.48 Yes 0 0 No -21 0.86 Yes 49 88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42047476 + NM_138572 TAF8 1 0.49 0.32 17 6.25 87 25 7.48 Yes 12 1.46 Yes 0 0 No -24 0.9 Yes 46 89.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 77387786 - NM_015975 TAF9B 1 0.43 0.4 25 2.08 77.56 37 6.9 Yes 53 0.63 No 0 0 No -29 0.49 No 34 53.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 159465233 - NM_138810 TAGAP 1 1.93 0.17 10 -1.08 0 31 6.92 Yes 18 1.96 Yes 0 0 No -30 0.92 Yes 40 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 159889162 - NM_003564 TAGLN2 1 0.01 0.18 10 -1.58 0 30 6.48 Yes 17 1.9 Yes 0 0 No -29 0.89 Yes 41 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 159890227 - NM_003564 TAGLN2 1 0.04 0.22 13 0.75 67.92 19 5 No 31 -1.81 No 0 0 No -18 0.79 Yes 52 52.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 159890289 - NM_003564 TAGLN2 1 0.04 0.22 12 3.06 68.08 28 6.12 Yes 57 0.89 Yes 0 0 No -23 0.33 No 43 34.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 159890372 - NM_003564 TAGLN2 1 0.42 2.44 62 6.49 85.06 18 5.83 Yes 76 1.34 Yes 0 0 No -31 0.38 No 53 50.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 752263 + NM_006755 TALDO1 1 0.03 0.18 7 7.75 85.86 29 7.75 Yes 16 1.33 Yes 28 0.83 Yes -28 0.89 Yes 42 91.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 759008 + NM_006755 TALDO1 1 0.08 0.44 21 5.72 77.05 28 6.64 Yes 75 2.34 Yes 27 0.74 Yes -31 0.57 No 39 58.43 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 756358 + NM_006755 TALDO1 1 0.02 0.1 7 9.77 95.1 36 6.02 Yes 29 2.09 Yes 0 0 No -35 0.69 Yes 49 60.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 759008 + NM_006755 TALDO1 1 0.13 0.68 30 5.72 77.05 28 6.64 Yes 75 2.34 Yes 27 0.74 Yes -31 0.57 No 39 58.43 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 763404 + NM_006755 TALDO1 1 0.03 0.21 14 6.66 89.58 25 7.29 Yes 68 1.89 Yes 0 0 No -30 0.69 Yes 40 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 764790 + NM_006755 TALDO1 1 0.02 0.13 9 -13.65 0 9 3.87 No 26 -2.43 No 24 0.68 Yes -70 0.09 No 57 31.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 11849217 - NR_135609 TAMM41 1 0.67 0.19 12 9.21 89.81 19 4.9 No 40 1.61 Yes 0 0 No -24 0.79 Yes 46 84.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 11851097 - NR_135609 TAMM41 1 0.15 0.11 7 4.98 72.48 25 5.64 Yes 50 -4.13 No 0 0 No -24 0.51 No 41 75.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 11852372 - NR_135609 TAMM41 1 1.06 0.74 30 10.13 87 43 6.19 Yes 65 -1.05 No 39 0.08 Yes -39 0.5 No 38 59.22 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 11868280 - NR_135609 TAMM41 1 5.88 3.1 71 9.34 82.94 42 7.29 Yes 29 1.77 Yes 33 0.41 Yes -41 0.73 Yes 29 85.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 11878876 - NR_135609 TAMM41 1 2.62 0.1 7 12 95.65 30 6.22 Yes 17 0.86 Yes 0 0 No -35 0.73 Yes 41 77.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20035492 + NM_001322172 TANGO2 1 0.67 0.35 21 5.89 90.92 22 5.24 No 40 1.21 Yes 21 0.76 Yes -21 0.63 No 18 66.88 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 20040882 + NM_001322172 TANGO2 1 6.94 0.74 35 10.03 87.89 22 6.4 Yes 9 1.41 Yes 21 0.83 Yes -21 0.76 Yes 49 91.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 20040959 + NM_001322172 TANGO2 1 417.43 34.03 72 11.65 88.65 24 5.37 No 52 -3.1 No 24 0.76 Yes -26 0.44 No 44 69.27 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 20043470 + NM_001322172 TANGO2 1 1.1 0.14 9 -1.68 0 30 6.48 Yes 17 1.81 Yes 0 0 No -29 0.89 Yes 41 94.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20044362 + NM_001322172 TANGO2 1 1.3 0.43 22 8.76 81.87 28 6.42 Yes 11 1.71 Yes 0 0 No -27 0.81 Yes 43 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20045648 + NM_001322172 TANGO2 1 1.53 0.54 28 7.15 88 28 4.64 No 49 0.84 Yes 0 0 No -23 0.85 Yes 43 72.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 20048696 + NM_001322172 TANGO2 1 0.9 0.26 15 7.01 86.19 26 8.64 Yes 13 1.43 Yes 25 0.89 Yes -25 0.9 Yes 45 94.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 20049018 + NM_001322172 TANGO2 1 1.26 0.42 23 0.28 70.84 15 4.84 No 2 0.67 No 25 0.79 Yes -25 0.49 No 56 34.64 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 20050017 + NM_001322172 TANGO2 1 0.6 0.17 10 4.93 73.04 30 6.24 Yes NA NA NA 0 0 No -29 0.62 No 41 85.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68900907 + NM_024562 TANGO6 1 0.31 0.11 8 12.04 100 44 6.92 Yes 69 0.48 No 0 0 No -37 0.5 No 33 69.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68912009 + NM_024562 TANGO6 1 0.76 0.38 19 4.89 82.76 44 7.06 Yes 50 0.87 Yes 26 0.38 Yes -26 0.48 No 44 55.42 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 68971069 + NM_024562 TANGO6 1 2.37 0.88 39 7.95 83.35 27 6.52 Yes 14 1.48 Yes 26 0.89 Yes -26 0.89 Yes 44 92.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 68976829 + NM_024562 TANGO6 1 0.32 0.11 8 4.19 0 33 5.88 Yes 43 0.85 Yes 0 0 No -33 0.38 No 37 53.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69013769 + NM_024562 TANGO6 1 0.58 0.11 8 8.86 85.86 23 7.13 Yes 10 1.32 Yes 0 0 No -22 0.61 No 48 50.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 162017459 + NM_001199135 TANK 1 3.36 1.07 45 10.8 83.64 28 7.72 Yes 15 0.56 No 28 0.9 Yes -28 0.79 Yes 42 72.36 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 162017795 + NM_001199135 TANK 1 16.43 5.51 72 9.66 88.88 26 5.57 Yes -3 0.64 No 25 0.8 Yes -30 0.67 Yes 40 69.31 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 162033622 + NM_001199135 TANK 1 0.49 0.13 8 7.39 80 20 6.84 Yes 7 2.16 Yes 0 0 No -25 0.76 Yes 45 77.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 162036151 + NM_001199135 TANK 1 0.3 0.11 7 6.17 77.59 17 5.18 No 32 0.81 Yes 28 0.42 Yes -20 0.68 Yes 50 80.75 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 162053847 + NM_001199135 TANK 1 0.16 0.79 37 9.11 90.17 39 6.35 Yes 68 0.5 No 38 0.12 Yes -38 0.54 No 32 64.82 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 162059373 + NM_001199135 TANK 1 0.39 1.83 56 6.6 88.41 42 6.83 Yes 29 0.51 No 41 0.33 Yes -36 0.46 No 35 60.22 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 162059994 + NM_001199135 TANK 1 1.4 6.63 72 2.67 81.9 18 5.46 No 5 1.61 Yes 18 0.66 Yes -17 0.65 No 53 68.14 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 162060661 + NM_001199135 TANK 1 0.05 0.15 11 8.69 90.65 27 3.92 No 10 0.4 No 0 0 No -29 0.33 No 41 65.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 162081763 + NM_001199135 TANK 1 0.09 0.24 14 7.05 80.93 29 6.92 Yes 16 1.09 Yes 0 0 No -28 0.65 No 42 81.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 162084164 + NM_001199135 TANK 1 0.04 0.14 7 1.18 73.57 18 4.69 No 5 0.66 No 0 0 No -23 0.63 No 47 55.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 162084167 + NM_001199135 TANK 1 0.08 0.18 10 2.47 82.37 21 5 No 8 0.65 No 0 0 No -26 0.51 No 50 59.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 162091829 + NM_001199135 TANK 1 0.03 0.11 7 -4.1 0 15 3.68 No 68 -5.48 No 27 0.89 Yes -14 0.42 No 45 40.5 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 27718936 + NM_020791 TAOK1 1 1.16 0.43 23 6.62 75.87 39 6.26 Yes 26 1.52 Yes 0 0 No -32 0.84 Yes 32 73.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27722870 + NM_020791 TAOK1 1 0.3 0.11 7 10.07 88.27 30 7.81 Yes 17 1.65 Yes 0 0 No -29 0.93 Yes 41 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27725245 + NM_020791 TAOK1 1 0.59 0.19 10 3.4 83.78 26 7.67 Yes 13 2.12 Yes 0 0 No -25 0.85 Yes 45 86.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27725270 + NM_020791 TAOK1 1 2.27 0.76 35 5.72 90.92 28 5.83 Yes 38 2.09 Yes 0 0 No -50 0.7 Yes 20 88.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27730743 + NM_020791 TAOK1 1 1.18 0.36 20 11.81 92.93 40 6.32 Yes 27 1.4 Yes 0 0 No -39 0.73 Yes 31 63.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 27778475 + NM_020791 TAOK1 1 2.82 0.97 41 3.97 81.27 29 7.21 Yes 16 2.1 Yes 0 0 No -28 0.91 Yes 42 90.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27785737 + NM_020791 TAOK1 1 0.59 0.33 20 1.77 0 62 6.66 Yes 49 1.5 Yes 0 0 No -31 0.69 Yes 39 67.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 27791867 + NM_020791 TAOK1 1 0.39 0.24 12 9.66 99.43 40 6.3 Yes 24 1.09 Yes 0 0 No -36 0.53 No 34 63.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 27794862 + NM_020791 TAOK1 1 0.39 0.35 20 10.87 87.15 31 5.14 No 0 -0.88 No 0 0 No -30 0.35 No 44 56.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 27807387 + NM_020791 TAOK1 1 0.78 0.47 25 -6.27 68.16 27 5.48 No -3 0.62 No 0 0 No -26 0.62 No 44 56.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 27818301 + NM_020791 TAOK1 1 0.73 0.79 32 8.67 80.27 34 6.98 Yes 21 1.99 Yes 0 0 No -33 0.8 Yes 37 87.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27818827 + NM_020791 TAOK1 1 2.88 3.15 70 6.83 73.49 34 5.65 Yes 9 0.97 Yes 0 0 No -21 0.79 Yes 49 67.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 27845811 + NM_020791 TAOK1 1 0.18 0.14 8 5.76 82.05 65 10.26 Yes 52 1.57 Yes 0 0 No -28 0.7 Yes 42 63.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 27846371 + NM_020791 TAOK1 1 0.32 0.24 12 4.82 79.1 22 5.42 No 9 0.57 No 0 0 No -21 0.37 No 49 53.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 27849354 + NM_020791 TAOK1 1 0.3 0.24 13 3.94 79.18 26 5.48 No 47 -5.06 No 0 0 No -25 0.9 Yes 45 81.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 27862596 + NM_020791 TAOK1 1 0.95 0.71 28 5.75 84.35 21 3.68 No 14 -1.26 No 0 0 No -25 0.58 No 45 62.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 29989037 + NM_016151 TAOK2 1 0.32 0.19 12 5.92 79.72 25 5.17 No 12 0.96 Yes 23 0.87 Yes -24 0.74 Yes 46 72.78 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 29989063 + NM_016151 TAOK2 1 0.18 0.11 7 1.62 0 36 5.3 No 38 0.98 Yes 0 0 No -28 0.79 Yes 42 84.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 29994350 + NM_016151 TAOK2 1 0.25 0.24 15 6.93 80.47 43 7.68 Yes 30 1.37 Yes 23 0.86 Yes -42 0.86 Yes 28 97.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 29994371 + NM_016151 TAOK2 1 0.7 0.65 31 8.3 84.73 24 5.48 No 51 1.38 Yes 23 0.86 Yes -23 0.69 Yes 47 64.2 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 29994374 + NM_016151 TAOK2 1 0.98 0.94 38 6.69 80.85 27 5.74 Yes 54 1.38 Yes 23 0.86 Yes -26 0.71 Yes 44 56.33 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 29995744 + NM_016151 TAOK2 1 0.26 0.17 10 10.61 79.13 29 5.12 No 64 0.72 No 0 0 No -28 0.3 No 46 71.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 29996168 + NM_016151 TAOK2 1 0.16 0.14 9 8.29 82.12 28 5.53 No 49 -1.61 No 0 0 No -27 0.7 Yes 43 74.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 118589801 - NM_001346489 TAOK3 1 0.15 0.22 13 8.68 84.54 23 5.39 No 23 2.16 Yes 0 0 No -22 0.81 Yes 48 82.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118664335 - NM_001346489 TAOK3 1 0.46 0.67 33 10.62 88.27 25 5.19 No 12 0.9 Yes 0 0 No -25 0.59 No 37 65.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 118668728 - NM_001346489 TAOK3 1 0.17 0.26 15 10.81 89.37 18 5.07 No 5 0.5 No 0 0 No -22 0.89 Yes 48 80.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 118673712 - NM_001346489 TAOK3 1 0.1 0.14 7 7.1 74.18 62 7.74 Yes 11 0.91 Yes 0 0 No -23 0.94 Yes 47 81.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118674096 - NM_001346489 TAOK3 1 0.42 0.57 28 11.15 97.75 33 6.51 Yes 20 2.46 Yes 0 0 No -25 0.47 No 45 74.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 118674499 - NM_001346489 TAOK3 1 0.59 0.83 36 6.77 81.69 17 5.6 Yes 4 1.06 Yes 30 0.38 Yes -30 0.33 No 54 32.13 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 118682167 - NM_001346489 TAOK3 1 0.18 0.31 18 5.8 88.83 30 5.2 No 0 0.87 Yes 0 0 No -29 0.48 No 48 57.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 118693883 - NM_001346489 TAOK3 1 0.07 0.13 7 3.01 0 34 7.39 Yes 64 0.92 Yes 24 0.84 Yes -38 0.7 Yes 32 79.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 118699479 - NM_001346489 TAOK3 1 6.82 12.96 72 4.33 77.26 44 7.55 Yes 31 1.5 Yes 43 0.51 Yes -43 0.82 Yes 27 82.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 118734969 - NM_001346489 TAOK3 1 2.89 0.29 17 6.97 87.58 62 5.29 No 49 1.23 Yes 27 0.59 Yes -35 0.61 No 39 48.28 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 6568219 + NM_018009 TAPBPL 1 0.2 0.11 8 8.33 85.22 42 7.28 Yes 50 1.06 Yes 0 0 No -41 0.73 Yes 29 88.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6568707 + NM_018009 TAPBPL 1 0.21 0.11 8 8.62 90.19 16 6.03 Yes 3 1.13 Yes 0 0 No -25 0.87 Yes 45 80.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6569619 + NM_018009 TAPBPL 1 0.35 0.19 10 7 94.45 23 5.82 Yes 72 0.7 No 0 0 No -22 0.85 Yes 48 84.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6569802 + NM_018009 TAPBPL 1 0.67 0.44 28 8.88 76.27 16 5.64 Yes 28 0.77 No 0 0 No -28 0.6 No 42 64.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6570289 + NM_018009 TAPBPL 1 5.5 3.64 69 6.7 81.15 32 5.74 Yes 29 0.32 No 0 0 No -26 0.52 No 45 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6570324 + NM_018009 TAPBPL 1 4.61 2.99 61 8.48 83.8 25 4.67 No 12 1.13 Yes 0 0 No -24 0.76 Yes 46 63.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 6570329 + NM_018009 TAPBPL 1 0.57 0.42 24 0.05 0 30 5.05 No 17 1.1 Yes 0 0 No -29 0.78 Yes 41 69.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 6570436 + NM_018009 TAPBPL 1 0.32 0.19 11 5.1 81.28 27 6.16 Yes 54 -4.81 No 0 0 No -26 0.95 Yes 44 94.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6571075 + NM_018009 TAPBPL 1 0.18 0.14 8 1.48 76.11 33 6.07 Yes 58 -5.11 No 0 0 No -32 0.88 Yes 38 82.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 16169291 - NM_153365 TAPT1 1 0.61 0.17 11 11.62 88.06 22 5.06 No 17 1.34 Yes 0 0 No -29 0.73 Yes 41 74.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 16191785 - NM_153365 TAPT1 1 1.57 0.43 23 8.52 85.34 23 5.37 No 74 -0.99 No 0 0 No -25 0.7 Yes 45 80.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 16198347 - NM_153365 TAPT1 1 2.76 0.75 33 6.74 75.44 37 6.94 Yes 71 -0.66 No 36 0.36 Yes -34 0.69 Yes 36 58.34 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 234536695 - NM_005646 TARBP1 1 7.48 3.69 70 9.23 95.29 23 4.87 No 75 0.96 Yes 22 0.78 Yes -22 0.78 Yes 45 64.86 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 234541227 - NM_005646 TARBP1 1 0.48 0.32 16 7.73 84.51 23 5.2 No 76 0.82 Yes 22 0.95 Yes -22 0.83 Yes 48 88.47 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 234545320 - NM_005646 TARBP1 1 5.74 1.93 54 5 79.02 29 7.45 Yes 8 -2.46 No 0 0 No -28 0.67 Yes 42 84.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 234553954 - NM_005646 TARBP1 1 0.16 0.13 8 3.53 75.11 29 5.88 Yes 29 0.73 No 0 0 No -28 0.78 Yes 42 74.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 234565302 - NM_005646 TARBP1 1 2.36 0.9 41 5.69 79.26 61 7.85 Yes 9 0.02 No 0 0 No -21 0.55 No 49 70.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 234569311 - NM_005646 TARBP1 1 0.46 0.17 10 3.96 0 10 4 No 8 0.74 No 0 0 No -30 0.62 No 40 82.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 234584323 - NM_005646 TARBP1 1 45.21 9.93 72 3.7 86.49 20 6.39 Yes 7 1.35 Yes 0 0 No -19 0.5 No 51 55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 234588622 - NM_005646 TARBP1 1 0.39 0.26 16 8.48 85.86 24 3.74 No 4 0.8 Yes 0 0 No -23 0.69 Yes 47 68.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 234596139 - NM_005646 TARBP1 1 0.56 0.25 12 1.07 0 29 6.08 Yes 57 0.74 No 0 0 No -25 0.74 Yes 45 66.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 234596139 - NM_005646 TARBP1 1 0.99 0.42 23 1.07 0 29 6.08 Yes 57 0.74 No 0 0 No -25 0.74 Yes 45 66.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 234602623 - NM_005646 TARBP1 1 2.86 1.54 48 9.67 83.11 38 5.87 Yes 25 1.46 Yes 0 0 No -28 0.48 No 38 66.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 53895803 + NM_134324 TARBP2 1 4 0.5 28 3.13 0 32 6.71 Yes 19 0.75 No 26 0.92 Yes -31 0.91 Yes 39 89.51 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 53895843 + NM_134324 TARBP2 1 1.26 0.18 11 -8.28 0 14 3.13 No 59 0.74 No 28 0.25 Yes -22 0.43 No 57 13.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 53897513 + NM_134324 TARBP2 1 3.45 2.6 65 8.63 84.44 16 5.05 No 33 0.18 No 24 0.75 Yes -20 0.35 No 50 54.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 53898395 + NM_134324 TARBP2 1 3.21 2.81 64 8.86 77.73 40 6.78 Yes 27 1.32 Yes 28 0.69 Yes -39 0.8 Yes 31 72.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 53898484 + NM_134324 TARBP2 1 0.08 0.1 7 -11 69.75 29 5.75 Yes 16 1.39 Yes 0 0 No -28 0.92 Yes 42 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53899728 + NM_134324 TARBP2 1 0.44 0.29 15 7.1 82.79 23 5.49 No 10 0.78 Yes 0 0 No -22 0.77 Yes 48 53.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 11075580 + NM_007375 TARDBP 1 0.34 1.19 47 9.52 93.75 15 5.08 No 2 0.22 No 25 0.73 Yes -25 0.7 Yes 45 57.18 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 11076179 + NM_007375 TARDBP 1 0.18 0.64 29 8.16 84.73 20 7.14 Yes 7 1.36 Yes 19 0.78 Yes -19 0.87 Yes 51 90.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 11076184 + NM_007375 TARDBP 1 0.04 0.13 7 1.28 0 25 7.48 Yes 12 1.32 Yes 0 0 No -24 0.92 Yes 46 92.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11078430 + NM_007375 TARDBP 1 0.08 0.35 18 6.46 86.16 20 7.14 Yes 7 1.53 Yes 0 0 No -19 0.5 No 51 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 11083249 + NM_007375 TARDBP 1 0.03 0.14 7 8.27 88.71 24 5.21 No 47 1.18 Yes 23 0.51 Yes -29 0.49 No 44 37.78 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 11081850 + NM_007375 TARDBP 1 0.03 0.15 11 5.35 86.46 31 6.48 Yes 18 1.17 Yes 0 0 No -30 0.91 Yes 40 96.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 11083249 + NM_007375 TARDBP 1 0.04 0.18 9 8.27 88.71 24 5.21 No 47 1.18 Yes 23 0.51 Yes -29 0.49 No 44 37.78 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 11084358 + NM_007375 TARDBP 1 0.08 0.33 16 5.85 72.55 30 6.32 Yes 61 0.12 No 29 0.55 Yes -29 0.55 No 41 29.52 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 33452445 + NR_047676 TARS 1 0.06 0.31 18 4.63 69.75 22 6.09 Yes 9 1.09 Yes 21 0.9 Yes -21 0.83 Yes 49 86.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 33453398 + NR_047676 TARS 1 0.11 0.58 30 0.46 0 45 8.19 Yes -4 -1.8 No 27 0.56 Yes -44 0.8 Yes 26 88.22 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 33455086 + NR_047676 TARS 1 0.06 0.25 14 -2.99 56.9 16 5.38 No 55 0.43 No 22 0.46 Yes -15 0.33 No 55 39.13 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 33466091 + NR_047676 TARS 1 0.05 0.32 19 9.08 88.67 19 5.18 No 6 0.38 No 26 0.33 Yes -18 0.47 No 52 58.56 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 150471001 + NM_025150 TARS2 1 0.08 0.1 7 4.27 68.89 21 5.51 No 35 2.46 Yes 0 0 No -26 0.84 Yes 44 66.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 150477111 + NM_025150 TARS2 1 1.1 0.68 30 4.17 0 48 6.59 Yes 35 1.36 Yes 0 0 No -41 0.61 No 39 76.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 150479301 + NM_025150 TARS2 1 0.1 0.11 8 6.21 73.23 54 8.05 Yes 41 0.68 No 0 0 No -30 0.42 No 34 58.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 102211129 - NM_152334 TARSL2 1 1.09 0.21 14 8.01 88.08 23 4.9 No 24 0.93 Yes 0 0 No -22 0.88 Yes 48 88.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 102214210 - NM_152334 TARSL2 1 0.6 0.18 8 7.51 88.27 43 6.66 Yes -2 0.26 No 0 0 No -31 0.67 Yes 39 90.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 102220289 - NM_152334 TARSL2 1 1.26 0.18 13 4.25 76.06 31 5.83 Yes 18 0.94 Yes 0 0 No -30 0.93 Yes 40 92.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 102239639 - NM_152334 TARSL2 1 17.35 3.17 69 6.04 86.34 24 5.44 No 11 0.11 No 23 0.84 Yes -23 0.84 Yes 47 78.17 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 102249109 - NM_152334 TARSL2 1 0.71 0.18 12 0.45 0 19 6.65 Yes 35 0.01 No 0 0 No -32 0.74 Yes 38 80.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 13436699 - NM_001323603 TASP1 1 0.83 0.19 10 7.02 74.43 27 5.65 Yes 45 0.49 No 0 0 No -27 0.57 No 44 39.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 13459798 - NM_001323603 TASP1 1 3.01 0.68 33 6.73 89.51 27 4.39 No 28 1.94 Yes 0 0 No -26 0.71 Yes 44 74.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 13504773 - NM_001323603 TASP1 1 0.42 0.1 7 3.76 76.63 15 5.19 No 2 1.51 Yes 0 0 No -24 0.49 No 56 41.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 13517697 - NM_001323603 TASP1 1 6.15 1.42 49 8.54 90.97 29 6.49 Yes 16 0.28 No 0 0 No -28 0.96 Yes 42 95.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 13532637 - NM_001323603 TASP1 1 2.58 0.63 25 2.66 77.16 26 5.32 No 30 1.18 Yes 0 0 No -25 0.74 Yes 45 64.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 13553330 - NM_001323603 TASP1 1 0.74 0.25 14 4.74 84.41 28 5.66 Yes 15 0.29 No 0 0 No -27 0.81 Yes 43 92.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 125516193 - NM_001317890 TATDN1 1 0.78 0.72 31 4.4 76.46 26 4.98 No 38 0.9 Yes 25 0.84 Yes -25 0.66 No 45 48.13 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 125516226 - NM_001317890 TATDN1 1 0.26 0.22 14 7.08 88.17 18 6.48 Yes 5 0.93 Yes 25 0.84 Yes -35 0.82 Yes 35 74.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 10301869 + NM_014760 TATDN2 1 3.02 2.92 67 6.25 82.21 25 6.08 Yes -3 0.18 No 27 0.83 Yes -27 0.87 Yes 43 80 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 10304609 + NM_014760 TATDN2 1 0.78 0.76 29 2.48 0 37 8.05 Yes 38 0.88 Yes 0 0 No -39 0.64 No 31 81.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 10307982 + NM_014760 TATDN2 1 0.13 0.14 8 10.75 76.76 27 7.5 Yes 14 0.75 No 0 0 No -26 0.71 Yes 44 80.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 10313419 + NM_014760 TATDN2 1 0.18 0.17 11 1.34 0 42 6.75 Yes 29 1.42 Yes 0 0 No -41 0.51 No 29 73.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 10315829 + NM_014760 TATDN2 1 0.52 0.54 28 10.96 89.8 38 5.1 No 25 1.82 Yes 0 0 No -33 0.66 No 37 90.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 10317516 + NM_014760 TATDN2 1 0.13 0.15 9 -5.32 54.14 35 6 Yes 22 0.04 No 0 0 No -29 0.29 No 35 50.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 10320347 + NM_014760 TATDN2 1 21.66 19.14 72 5.88 89.76 16 4.8 No 3 1.6 Yes 0 0 No -22 0.8 Yes 48 84.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 10320351 + NM_014760 TATDN2 1 0.11 0.1 7 1.62 0 20 5.13 No 7 1.59 Yes 0 0 No -26 0.6 No 44 76.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 212966259 + NM_001146171 TATDN3 1 1.3 0.31 15 4.38 88.24 19 4.94 No 47 -2.84 No 23 0.79 Yes -18 0.68 Yes 52 59.35 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 212970494 + NM_001146171 TATDN3 1 0.65 0.21 15 4.51 74.43 37 7.07 Yes 24 0.49 No 0 0 No -37 0.64 No 34 81.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 212986201 + NM_001146171 TATDN3 1 0.96 0.49 24 -2.33 46.49 44 6.63 Yes 31 1.04 Yes 0 0 No -43 0.72 Yes 27 68.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 27811545 + NM_006024 TAX1BP1 1 0.14 0.35 20 9.36 85.05 36 4.5 No 29 0.77 No 35 0.41 Yes -28 0.34 No 42 59.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 27818794 + NM_006024 TAX1BP1 1 0.06 0.15 8 5.23 76.92 28 8.24 Yes 30 0.68 No 0 0 No -27 0.74 Yes 43 68.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 27831645 + NM_006024 TAX1BP1 1 0.42 1.11 49 4.13 87.46 24 5.1 No 53 -1.58 No 0 0 No -23 0.86 Yes 47 88.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 27833968 + NM_006024 TAX1BP1 1 0.49 1.18 42 2.09 71.94 24 5.19 No 2 0.96 Yes 0 0 No -23 0.83 Yes 47 85.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 27835737 + NM_006024 TAX1BP1 1 1.39 3.15 67 4.68 86.3 31 5.85 Yes 71 1.56 Yes 0 0 No -30 0.74 Yes 40 84.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 27842727 + NM_006024 TAX1BP1 1 0.13 0.35 21 6.8 90.31 24 5.39 No 70 -3.32 No 23 0.39 Yes -23 0.52 No 46 44.53 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 27857084 + NM_006024 TAX1BP1 1 0.08 0.18 11 7.72 74.69 15 3.86 No 29 0.05 No 0 0 No -23 0.76 Yes 47 74.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 27863876 + NM_006024 TAX1BP1 1 0.05 0.13 7 9.36 95.59 23 6.18 Yes 10 1.67 Yes 0 0 No -22 0.81 Yes 48 86.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 27867333 + NM_006024 TAX1BP1 1 0.19 0.47 18 5.14 77.25 35 4.87 No 61 1.03 Yes 28 0.75 Yes -26 0.66 No 44 82.29 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr7 27867360 + NM_006024 TAX1BP1 1 0.23 0.53 27 -0.97 0 32 5.73 Yes 70 -1.76 No 0 0 No -32 0.85 Yes 38 80.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 27868049 + NM_006024 TAX1BP1 1 0.21 0.58 30 1.3 58.45 20 5.44 No 13 -2.3 No 0 0 No -24 0.51 No 46 67.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 3568088 - NM_014604 TAX1BP3 1 0.73 0.63 25 -2.35 0 52 6.54 Yes 39 1.82 Yes 0 0 No -27 0.82 Yes 43 85.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 153648043 + NM_001303465 TAZ 1 296.42 15.82 72 11.64 90.29 28 5.37 No 66 -3.22 No 28 0.54 Yes -30 0.63 No 42 57.95 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 38019014 + NM_015173 TBC1D1 1 0.82 1.21 48 8.3 86.19 33 5.88 Yes 20 0.29 No 0 0 No -20 0.53 No 50 47.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 38031012 + NM_015173 TBC1D1 1 0.22 0.32 19 1.99 0 43 6.86 Yes 30 0.31 No 0 0 No -37 0.53 No 33 45.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 38031984 + NM_015173 TBC1D1 1 0.08 0.13 7 8.86 76.14 22 5.73 Yes 40 0.58 No 29 0.41 Yes -21 0.6 No 49 64.95 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 38053519 + NM_015173 TBC1D1 1 0.96 1.03 44 7.27 72.29 33 9.95 Yes 20 2.62 Yes 32 0.94 Yes -32 0.91 Yes 38 94.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 38054726 + NM_015173 TBC1D1 1 1.21 1.31 52 2.76 58.41 27 8.07 Yes 14 1.28 Yes 26 0.81 Yes -26 0.51 No 38 54.75 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 38062240 + NM_015173 TBC1D1 1 2.22 2.4 52 11.28 91.45 22 5.1 No 9 1.15 Yes 21 0.9 Yes -21 0.87 Yes 49 89.63 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 38099645 + NM_015173 TBC1D1 1 0.79 1.6 56 6.52 83.85 35 7.14 Yes 63 -3.7 No 0 0 No -19 0.55 No 36 64.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 38102325 + NM_015173 TBC1D1 1 0.2 0.35 21 10.84 97.59 27 5.57 Yes 68 -3.94 No 0 0 No -26 0.89 Yes 44 89.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 38115184 + NM_015173 TBC1D1 1 0.09 0.15 9 5.02 83.81 58 7.09 Yes 41 1.29 Yes 0 0 No -26 0.6 No 44 47.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 38120017 + NM_015173 TBC1D1 1 0.16 0.19 13 3.8 66.33 47 5.61 Yes 34 0.73 No 29 0.85 Yes -28 0.62 No 41 69.2 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 38126584 + NM_015173 TBC1D1 1 0.17 0.22 14 -8.46 0 30 7.34 Yes 17 1.2 Yes 0 0 No -29 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 30689309 - NM_031937 TBC1D10A 1 2.63 1.28 46 5.63 92.25 41 7.74 Yes 28 0.43 No 40 0.69 Yes -40 0.88 Yes 30 94.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 30689443 - NM_031937 TBC1D10A 1 0.5 0.24 14 1.66 88.67 22 4.8 No 39 0.8 Yes 0 0 No -22 0.34 No 48 25.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 30690055 - NM_031937 TBC1D10A 1 0.72 0.33 22 10.85 86.55 19 5.47 No 62 -0.31 No 0 0 No -29 0.82 Yes 41 84.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 30700641 - NM_031937 TBC1D10A 1 0.4 0.17 10 7.6 81.67 38 6.24 Yes 47 0.17 No 32 0.31 Yes -19 0.53 No 34 44.07 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 30369539 - NM_015527 TBC1D10B 1 0.23 0.24 15 4.69 80.64 23 5.2 No 21 0.99 Yes 0 0 No -20 0.49 No 47 60.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 30370901 - NM_015527 TBC1D10B 1 0.12 0.11 7 8.09 73.6 27 5.37 No 49 1.03 Yes 0 0 No -26 0.93 Yes 44 84.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30378488 - NM_015527 TBC1D10B 1 0.2 0.18 13 5.72 90.92 28 5.29 No 68 0.65 No 0 0 No -27 0.8 Yes 43 66.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67173377 + NR_046266 TBC1D10C 1 9.47 5.83 67 -3.92 0 24 6.63 Yes 70 -2.28 No 19 0.8 Yes -23 0.92 Yes 47 83.66 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 67173392 + NR_046266 TBC1D10C 1 0.28 0.21 10 -0.67 0 18 4.1 No 26 -2 No 0 0 No -38 0.91 Yes 32 67.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67173603 + NR_046266 TBC1D10C 1 1.62 0.5 27 3.4 63.26 21 6.69 Yes 67 0.56 No 0 0 No -20 0.68 Yes 42 58.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67174073 + NR_046266 TBC1D10C 1 0.68 0.22 14 -0.57 0 12 4.24 No 47 1.45 Yes 28 0.97 Yes -59 0.8 Yes 11 79.96 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 67175019 + NR_046266 TBC1D10C 1 0.25 0.11 7 6.82 86.82 26 4.69 No 13 0.25 No 0 0 No -30 0.67 Yes 40 82.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 96203084 + NM_015188 TBC1D12 1 5.17 0.63 28 5.04 83.64 21 7.73 Yes 8 1.73 Yes 0 0 No -20 0.68 Yes 50 85.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96203086 + NM_015188 TBC1D12 1 2.08 0.26 15 -4.21 81.28 23 7.86 Yes 10 1.74 Yes 0 0 No -22 0.76 Yes 48 86.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 96207391 + NM_015188 TBC1D12 1 16.32 1.74 55 12.63 91.12 19 4.89 No 23 0.14 No 0 0 No -27 0.47 No 52 60.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 96211314 + NM_015188 TBC1D12 1 0.86 0.11 7 6.4 85.78 26 5.78 Yes 64 0.81 Yes 0 0 No -25 0.69 Yes 45 60.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 131553540 + NM_018201 TBC1D13 1 0.19 0.11 7 4.89 74.43 24 5.92 Yes 60 -2.9 No 0 0 No -23 0.96 Yes 47 94.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131561177 + NM_018201 TBC1D13 1 0.33 0.19 12 7.34 80.83 44 8.54 Yes 31 1.67 Yes 0 0 No -43 0.87 Yes 27 87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131565040 + NM_018201 TBC1D13 1 0.26 0.19 12 3.28 0 35 7.81 Yes 22 1.03 Yes 0 0 No -34 0.78 Yes 36 87.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131568200 + NM_018201 TBC1D13 1 2.69 2.13 62 4.85 85.9 19 6.9 Yes 6 1.71 Yes 0 0 No -18 0.61 No 52 85.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 6945920 + NM_001113361 TBC1D14 1 0.62 0.33 16 11.79 93.74 31 8.7 Yes 18 1.79 Yes 0 0 No -30 0.7 Yes 40 87.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 7002096 + NM_001113361 TBC1D14 1 0.16 0.17 11 6.66 84.14 16 9.07 Yes 3 1.12 Yes 0 0 No -20 0.72 Yes 50 81.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 7009250 + NM_001113361 TBC1D14 1 0.94 0.81 35 7.74 87.3 16 7.48 Yes 3 1.54 Yes 36 0.45 Yes -36 0.66 No 34 87.2 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 7022727 + NM_001113361 TBC1D14 1 0.44 0.42 25 8.22 84.59 27 5.29 No 42 -2.06 No 0 0 No -25 0.49 No 49 56.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 7026484 + NM_001113361 TBC1D14 1 0.1 0.11 7 6.32 93.78 19 5 No 51 0.65 No 0 0 No -18 0.85 Yes 52 88.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 7026748 + NM_001113361 TBC1D14 1 0.28 0.29 18 1.61 79.32 28 5.2 No 67 0.98 Yes 0 0 No -43 0.6 No 27 72.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 72278639 + NM_001146214 TBC1D15 1 0.41 0.28 17 4.59 85.89 13 5.42 No 0 0.4 No 26 0.38 Yes -20 0.62 No 50 54.61 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 72288104 + NM_001146214 TBC1D15 1 1.7 1.5 48 4.34 88.92 25 5.47 No 37 -2.32 No 24 0.84 Yes -24 0.92 Yes 46 91.6 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 72301642 + NM_001146214 TBC1D15 1 1.96 1.9 59 4.98 82.38 30 6.56 Yes 17 0.92 Yes 29 0.91 Yes -29 0.95 Yes 41 97.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 72311483 + NM_001146214 TBC1D15 1 0.16 0.13 7 -2.17 0 10 3.83 No 14 0.91 Yes 0 0 No -39 0.31 No 27 21.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 72314492 + NM_001146214 TBC1D15 1 0.18 0.14 8 2.46 60.94 19 5.66 Yes 13 -3.22 No 25 0.72 Yes -18 0.49 No 47 25.76 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 50382657 + NM_024682 TBC1D17 1 0.31 0.15 10 5.98 81.27 20 5.54 No 7 0.37 No 0 0 No -19 0.53 No 51 61.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 50382662 + NM_024682 TBC1D17 1 0.48 0.25 15 2.07 0 25 5.97 Yes 12 0.02 No 0 0 No -24 0.68 Yes 46 70.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 50385510 + NM_024682 TBC1D17 1 0.24 0.13 8 5 0 15 4.58 No 24 1.93 Yes 19 0.33 Yes -36 0.9 Yes 34 74.29 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 50387768 + NM_024682 TBC1D17 1 0.43 0.28 13 4.36 82.49 33 6.52 Yes 58 2.22 Yes 0 0 No -32 0.81 Yes 38 88.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 50388428 + NM_024682 TBC1D17 1 5.65 2.13 59 6.21 89.07 22 5.91 Yes 9 1.06 Yes 22 0.83 Yes -22 0.7 Yes 49 63.53 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 26640004 + NM_001292054 TBC1D19 1 1.51 0.19 9 8.82 86.69 21 6.16 Yes 8 0.18 No 0 0 No -23 0.51 No 42 55.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 26661268 + NM_001292054 TBC1D19 1 1.82 0.24 12 2.42 69.53 23 5.38 No 66 1.54 Yes 0 0 No -22 0.55 No 48 45.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 26664485 + NM_001292054 TBC1D19 1 3.89 0.54 28 6.88 85.25 26 7.22 Yes 13 1.05 Yes 25 0.87 Yes -25 0.72 Yes 45 87.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 26667958 + NM_001292054 TBC1D19 1 1.23 0.19 10 -3.77 0 28 6.78 Yes 55 0.65 No 0 0 No -27 0.86 Yes 43 87.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 26724472 + NM_001292054 TBC1D19 1 5.39 0.74 36 7.55 86.08 20 5.83 Yes 7 1.18 Yes 0 0 No -19 0.81 Yes 51 85.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 26742300 + NM_001292054 TBC1D19 1 1.54 0.19 13 5.81 92.03 25 5.1 No 75 0.99 Yes 0 0 No -24 0.86 Yes 46 78.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 419865 - NR_111901 TBC1D20 1 0.18 0.11 7 6.76 81.13 33 7.53 Yes 20 0.54 No 0 0 No -32 0.7 Yes 38 60.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 419919 - NR_111901 TBC1D20 1 0.62 0.36 22 4.38 78.3 26 5.48 No 37 1.55 Yes 0 0 No -25 0.38 No 45 46.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 420962 - NR_111901 TBC1D20 1 1.99 0.9 37 9 88.16 36 6.6 Yes 32 0.86 Yes 0 0 No -35 0.81 Yes 35 96.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 421705 - NR_111901 TBC1D20 1 0.22 0.1 7 6.13 90.92 29 5.39 No 40 0.83 Yes 0 0 No -28 0.62 No 42 51.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 47281621 + NM_001284303 TBC1D22A 1 0.15 0.17 10 5.07 75.43 30 6.61 Yes 33 0.8 Yes 0 0 No -29 0.74 Yes 41 69.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 47371731 + NM_001284303 TBC1D22A 1 6.17 5.42 69 7.65 83.78 43 6.63 Yes 4 0.14 No 0 0 No -35 0.54 No 35 43.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 47371934 + NM_001284303 TBC1D22A 1 0.18 0.18 10 8.82 82.09 32 8.36 Yes 19 1.28 Yes 0 0 No -31 0.67 Yes 39 76.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 47373269 + NM_001284303 TBC1D22A 1 0.3 0.26 15 13.77 94.14 24 5.39 No 38 0.99 Yes 0 0 No -26 0.64 No 44 46.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 47374442 + NM_001284303 TBC1D22A 1 2.06 1.82 52 9.23 85.91 28 7.72 Yes 52 1.07 Yes 0 0 No -31 0.68 Yes 39 82.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 47385910 + NM_001284303 TBC1D22A 1 1.01 0.96 41 6 82.92 12 5.74 Yes 34 0.29 No 0 0 No -26 0.49 No 44 52.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 47425417 + NM_001284303 TBC1D22A 1 0.17 0.19 11 8.84 89.06 44 5.22 No 40 1.5 Yes 0 0 No -35 0.42 No 35 67.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 47430351 + NM_001284303 TBC1D22A 1 0.29 0.35 21 4.81 83.05 19 5 No 44 1.66 Yes 0 0 No -23 0.4 No 49 50.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 47456892 + NM_001284303 TBC1D22A 1 0.25 0.29 17 2.93 69.52 20 6.24 Yes 73 0.16 No 0 0 No -19 0.66 No 51 54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 47507576 + NM_001284303 TBC1D22A 1 0.16 0.15 8 3.04 0 17 4 No 58 0.41 No 0 0 No -19 0.49 No 51 58.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 47509411 + NM_001284303 TBC1D22A 1 0.38 0.44 20 7.46 85.73 29 5.48 No 16 1.03 Yes 0 0 No -28 0.89 Yes 42 93.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 47565824 + NM_001284303 TBC1D22A 1 0.31 0.32 16 5.69 83.83 23 5 No 14 0.32 No 0 0 No -26 0.74 Yes 50 55.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 37231404 + NM_017772 TBC1D22B 1 0.94 0.31 19 4.57 87.75 26 5.05 No 50 2.42 Yes 0 0 No -25 0.85 Yes 45 84.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 37235433 + NM_017772 TBC1D22B 1 0.54 0.19 14 6.74 87.7 23 5.85 Yes 28 0.68 No 0 0 No -22 0.62 No 48 43.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 37240345 + NM_017772 TBC1D22B 1 0.98 0.36 19 6.14 85.02 17 6.93 Yes 63 1.74 Yes 0 0 No -27 0.47 No 54 76.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 37240350 + NM_017772 TBC1D22B 1 0.51 0.21 10 3.38 0 22 7.28 Yes 68 1.74 Yes 0 0 No -21 0.78 Yes 49 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 37250243 + NM_017772 TBC1D22B 1 2 0.64 35 9.98 84.98 26 6.75 Yes 38 0.45 No 0 0 No -25 0.76 Yes 45 80.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 37259438 + NM_017772 TBC1D22B 1 0.65 0.17 12 7.44 80.84 36 3.99 No 57 0.69 No 0 0 No -30 0.48 No 35 52.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 37270418 + NM_017772 TBC1D22B 1 0.49 0.15 11 4.44 72.06 31 6.39 Yes 18 1.8 Yes 0 0 No -30 0.62 No 40 67.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 37280655 + NM_017772 TBC1D22B 1 1.01 0.33 17 13.01 80.32 38 6.56 Yes 70 0.24 No 25 0.37 Yes -22 0.49 No 48 68.63 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 37284483 + NM_017772 TBC1D22B 1 0.71 0.17 9 2.7 0 32 4.66 No 9 1.32 Yes 0 0 No -31 0.58 No 39 56.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 37292037 + NM_017772 TBC1D22B 1 1.02 0.4 24 5.08 80.33 64 6.18 Yes 37 0.86 Yes 0 0 No -32 0.83 Yes 38 94.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 100013688 + NM_018309 TBC1D23 1 0.75 0.42 20 8.31 91.27 18 5.48 No 46 -1.5 No 0 0 No -20 0.87 Yes 50 85.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 100020919 + NM_018309 TBC1D23 1 1.22 0.58 26 -2.55 0 12 4.24 No 12 -3.25 No 0 0 No -29 0.81 Yes 41 77.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 100025288 + NM_018309 TBC1D23 1 0.46 0.31 20 -2.33 0 17 4.04 No 58 0.89 Yes 0 0 No -40 0.61 No 30 71.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 100030676 + NM_018309 TBC1D23 1 184.63 50.6 72 7.39 79.49 60 7.45 Yes 25 0.72 No 34 0.61 Yes -40 0.44 No 30 49.94 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 100039659 + NM_018309 TBC1D23 1 1.56 0.76 36 5.04 74.65 27 4.89 No 46 1.1 Yes 0 0 No -21 0.77 Yes 49 75.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2543593 + NM_020705 TBC1D24 1 0.87 0.13 9 5.58 79.04 24 5.06 No 37 0.35 No 0 0 No -23 0.47 No 47 57.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2547710 + NM_020705 TBC1D24 1 1.29 0.28 16 10.22 85.91 61 9.81 Yes 48 3.26 Yes 0 0 No -28 0.59 No 10 67.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 2548242 + NM_020705 TBC1D24 1 0.77 0.14 10 1.77 0 26 7.21 Yes 13 2.41 Yes 0 0 No -25 0.93 Yes 45 90.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2548942 + NM_020705 TBC1D24 1 1.18 0.28 14 0.53 76.54 17 4.64 No 14 -1.82 No 0 0 No -23 0.37 No 47 40.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2550386 + NM_020705 TBC1D24 1 0.38 0.11 7 5.78 81.08 20 5.05 No 52 1.53 Yes 0 0 No -19 0.76 Yes 51 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48407901 + NM_002536 TBC1D25 1 0.98 0.19 13 10.89 97.03 29 4.65 No 9 1.04 Yes 0 0 No -21 0.8 Yes 49 72.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48407901 + NM_002536 TBC1D25 1 0.46 0.11 7 10.89 97.03 29 4.65 No 9 1.04 Yes 0 0 No -21 0.8 Yes 49 72.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 78290646 - NM_144572 TBC1D2B 1 2.58 2.31 64 7.97 79.44 46 6.67 Yes 71 2.01 Yes 21 0.79 Yes -45 0.79 Yes 25 77.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 78291243 - NM_144572 TBC1D2B 1 0.71 0.67 28 6.3 81.9 24 5.19 No 57 1.1 Yes 23 0.63 Yes -23 0.77 Yes 47 81.57 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 78309104 - NM_144572 TBC1D2B 1 0.36 0.28 17 -4.33 72.55 36 6.4 Yes 64 0.66 No 29 0.81 Yes -35 0.68 Yes 35 74.6 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 78327082 - NM_144572 TBC1D2B 1 6.84 3.78 69 10.74 93.44 23 5.83 Yes 10 1.57 Yes 0 0 No -22 0.76 Yes 48 68.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 124114486 + NM_001330606 TBC1D31 1 7.16 3.92 66 8.57 92.33 20 6.77 Yes 7 2.24 Yes 19 0.88 Yes -29 0.7 Yes 41 57.52 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 124121767 + NM_001330606 TBC1D31 1 0.79 0.5 26 0.69 67.79 48 7.8 Yes 61 0.18 No 28 0.8 Yes -28 0.84 Yes 42 60.44 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 124123561 + NM_001330606 TBC1D31 1 0.48 0.19 11 2.81 72.73 53 5.8 Yes 17 0.62 No 0 0 No -29 0.47 No 23 58.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 124125200 + NM_001330606 TBC1D31 1 1.07 0.46 25 11.72 88.04 24 5.48 No 11 0.34 No 0 0 No -23 0.73 Yes 47 88.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 124135264 + NM_001330606 TBC1D31 1 0.5 0.22 12 3.5 71.96 26 6.6 Yes 13 2 Yes 0 0 No -25 0.94 Yes 45 90.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 124140485 + NM_001330606 TBC1D31 1 0.78 0.28 18 6.01 84.55 61 6.33 Yes 14 0.56 No 20 0.47 Yes -26 0.71 Yes 44 82.16 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 124141309 + NM_001330606 TBC1D31 1 9.95 2.9 67 -1.86 0 54 7.34 Yes 41 0.9 Yes 22 0.8 Yes -47 0.75 Yes 23 93.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 124141309 + NM_001330606 TBC1D31 1 3.73 1.11 46 -1.86 0 54 7.34 Yes 41 0.9 Yes 22 0.8 Yes -47 0.75 Yes 23 93.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 124142442 + NM_001330606 TBC1D31 1 0.34 0.15 10 0.25 0 24 6.59 Yes 11 0.5 No 0 0 No -37 0.42 No 33 73.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 124148735 + NM_001330606 TBC1D31 1 1.12 0.4 20 6.38 87.34 27 5.2 No 49 0.21 No 0 0 No -26 0.76 Yes 44 67.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 124158134 + NM_001330606 TBC1D31 1 0.9 0.29 18 3.01 0 46 7.73 Yes 33 1.91 Yes 0 0 No -45 0.91 Yes 25 95.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 124162278 + NM_001330606 TBC1D31 1 1.85 0.6 33 -1.95 71.48 44 6.78 Yes 4 1.16 Yes 0 0 No -24 0.53 No 40 43.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 121427608 - NR_104452 TBC1D32 1 1.47 0.11 8 6.98 81.92 34 7.3 Yes 21 1.02 Yes 0 0 No -33 0.86 Yes 37 88.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 121451071 - NR_104452 TBC1D32 1 1.93 0.15 11 8.24 74.76 68 4.67 No 69 1.17 Yes 30 0.81 Yes -30 0.5 No 40 54.46 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 121613262 - NR_104452 TBC1D32 1 0.44 0.11 7 9.12 80.92 39 5.63 Yes 2 1.42 Yes 0 0 No -27 0.58 No 43 76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 121615997 - NR_104452 TBC1D32 1 1.86 0.26 14 4.29 77.1 75 7.46 Yes 26 0.27 No 0 0 No -38 0.34 No 31 51.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 121645082 - NR_104452 TBC1D32 1 1.38 0.15 9 6.63 88.21 33 5.43 No 5 0.73 No 0 0 No -32 0.57 No 38 82.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 75861158 - NM_014832 TBC1D4 1 0.09 0.1 7 -1.38 0 34 5.83 Yes 74 -1.57 No 0 0 No -33 0.75 Yes 37 62.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 75881714 - NM_014832 TBC1D4 1 0.22 0.21 11 5.1 88.71 20 4.69 No 56 1.46 Yes 0 0 No -22 0.63 No 48 68.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 17204461 - NM_001134381 TBC1D5 1 0.16 0.13 8 8.57 82.52 27 6.63 Yes 14 1.26 Yes 0 0 No -26 0.71 Yes 44 85.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17221140 - NM_001134381 TBC1D5 1 0.92 0.83 36 9.36 94.53 25 4.8 No 69 -3.58 No 0 0 No -24 0.81 Yes 46 71.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17287432 - NM_001134381 TBC1D5 1 0.18 0.21 12 6.17 73.19 29 6.25 Yes -3 0.46 No 0 0 No -26 0.68 Yes 44 58.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 17292694 - NM_001134381 TBC1D5 1 0.9 1.11 43 9.17 93.15 25 5.39 No 68 -3.24 No 0 0 No -22 0.92 Yes 48 94.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17300082 - NM_001134381 TBC1D5 1 0.06 0.1 7 -2.43 83.95 34 5.98 Yes 21 0.6 No 0 0 No -30 0.39 No 40 74.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 17340162 - NM_001134381 TBC1D5 1 0.26 0.47 24 6.98 81.11 45 5.13 No 8 1.58 Yes 0 0 No -20 0.3 No 50 59.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 17349624 - NM_001134381 TBC1D5 1 2.36 2.85 63 5.22 84.71 28 6.87 Yes 15 1.15 Yes 0 0 No -27 0.83 Yes 43 76.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17361355 - NM_001134381 TBC1D5 1 0.36 0.47 23 2.62 0 33 8.82 Yes 20 0.48 No 0 0 No -32 0.89 Yes 38 93.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17361359 - NM_001134381 TBC1D5 1 0.16 0.17 10 2.53 83.95 29 8.6 Yes 16 0.5 No 0 0 No -28 0.89 Yes 42 93.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17382188 - NM_001134381 TBC1D5 1 0.11 0.11 8 8.46 86.65 36 5.33 No 23 1.22 Yes 22 0.64 Yes -22 0.69 Yes 35 53.57 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 17399340 - NM_001134381 TBC1D5 1 0.17 0.14 7 8.41 85.54 30 4.52 No 26 0.56 No 0 0 No -32 0.94 Yes 38 95.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17412088 - NM_001134381 TBC1D5 1 0.17 0.19 13 9.45 84.38 32 6.9 Yes 19 1.25 Yes 0 0 No -31 0.8 Yes 39 88.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17412204 - NM_001134381 TBC1D5 1 0.17 0.18 12 6.21 88.39 20 6.16 Yes -1 0.65 No 0 0 No -31 0.6 No 39 78.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 17416028 - NM_001134381 TBC1D5 1 0.2 0.4 22 2.4 0 34 5.96 Yes 31 -1.94 No 0 0 No -31 0.63 No 39 82.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 17425433 - NM_001134381 TBC1D5 1 0.11 0.17 10 4.01 85.49 27 5.57 Yes 14 0.58 No 0 0 No -26 0.97 Yes 44 98.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17446429 - NM_001134381 TBC1D5 1 0.1 0.1 7 5.86 81.58 30 5.83 Yes 17 1.05 Yes 0 0 No -29 0.83 Yes 41 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17470009 - NM_001134381 TBC1D5 1 0.71 0.74 36 -9.01 80.57 18 5.6 Yes 5 0.74 No 0 0 No -26 0.93 Yes 44 91.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17474387 - NM_001134381 TBC1D5 1 0.13 0.13 9 8.79 92.68 23 4.78 No 40 1.15 Yes 0 0 No -22 0.86 Yes 48 85.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17520868 - NM_001134381 TBC1D5 1 0.11 0.1 7 6.12 89.66 23 5.39 No 50 0.41 No 0 0 No -50 0.61 No 20 69.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 17520888 - NM_001134381 TBC1D5 1 0.52 0.49 27 1.32 81.93 31 5.92 Yes 30 0.41 No 0 0 No -30 0.8 Yes 40 72.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17538970 - NM_001134381 TBC1D5 1 1.09 1.17 9 6.66 88.15 33 5.74 Yes 24 0.02 No 0 0 No -26 0.91 Yes 44 91.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17550094 - NM_001134381 TBC1D5 1 0.71 0.39 20 1.01 0 37 6.89 Yes 72 0.85 Yes 0 0 No -36 0.86 Yes 34 91.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17560488 - NM_001134381 TBC1D5 1 6.68 3.86 68 8.92 90.56 31 5.74 Yes 55 1.01 Yes 30 0.79 Yes -30 0.87 Yes 40 92.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 17584958 - NM_001134381 TBC1D5 1 2.58 1.47 55 8.41 87.44 25 7.48 Yes 12 1.38 Yes 0 0 No -24 0.91 Yes 46 94.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 17586140 - NM_001134381 TBC1D5 1 1.05 0.69 34 11.28 95.65 27 4.99 No 56 0.76 No 0 0 No -27 0.95 Yes 43 94.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 17588569 - NM_001134381 TBC1D5 1 0.39 0.18 13 6.69 79.75 40 6.71 Yes 27 0.5 No 30 0.55 Yes -30 0.79 Yes 40 83.17 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 17603635 - NM_001134381 TBC1D5 1 23.53 13.6 71 5.82 79.84 17 5.86 Yes 60 1.01 Yes 25 0.62 Yes -25 0.55 No 45 56.45 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 17603635 - NM_001134381 TBC1D5 1 0.24 0.14 9 5.82 79.84 17 5.86 Yes 60 1.01 Yes 25 0.62 Yes -25 0.55 No 45 56.45 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 17607970 - NM_001134381 TBC1D5 1 0.29 0.18 9 5.96 78.23 32 5.66 Yes 73 0.86 Yes 0 0 No -31 0.61 No 40 62.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 17616803 - NM_001134381 TBC1D5 1 0.53 0.28 17 2.75 88.76 36 5.9 Yes 23 0.69 No 31 0.73 Yes -35 0.46 No 35 61.97 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 17618042 - NM_001134381 TBC1D5 1 0.98 0.56 32 8.72 82.31 30 7.69 Yes 17 0.07 No 29 0.3 Yes -33 0.37 No 41 33.53 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 17627959 - NM_001134381 TBC1D5 1 3.12 1.6 54 -0.77 63.73 32 7.34 Yes 19 0.8 Yes 31 0.55 Yes -31 0.66 Yes 39 84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 17628050 - NM_001134381 TBC1D5 1 8.05 4.54 71 9.91 91.26 15 4.28 No 44 -1.11 No 27 0.66 Yes -27 0.79 Yes 43 83.37 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 17664258 - NM_001134381 TBC1D5 1 55.4 31.51 72 7.07 97.88 30 5.85 Yes 67 0.04 No 30 0.51 Yes -30 0.6 No 40 68.17 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 13324022 - NM_001318806 TBC1D7 1 0.51 0.13 9 4.05 68.42 39 4.76 No 8 0.52 No 31 0.53 Yes -25 0.46 No 45 66.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 13305522 - NM_001318809 TBC1D7-LOC100130357 1 0.18 0.15 10 4.05 72.14 38 6.24 Yes 61 1.42 Yes 0 0 No -24 0.63 No 33 79.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 13315946 - NM_001318809 TBC1D7-LOC100130357 1 1.47 0.81 34 3.64 83 48 8.17 Yes 35 0.8 Yes 0 0 No -34 0.43 No 36 65.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 13324022 - NM_001318809 TBC1D7-LOC100130357 1 0.2 0.18 7 4.05 68.42 39 4.76 No 8 0.52 No 31 0.53 Yes -25 0.46 No 45 66.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 106092474 + NM_017752 TBC1D8B 1 25.04 2.99 64 13.68 92.63 37 7.9 Yes 24 0.77 No 25 0.56 Yes -33 0.44 No 37 54.85 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 106105832 + NM_017752 TBC1D8B 1 1.1 0.13 9 6.64 83.65 23 5.78 Yes 34 1.02 Yes 0 0 No -22 0.73 Yes 48 69.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 179291881 - NM_015043 TBC1D9B 1 0.19 0.29 15 8.29 79.94 44 7.48 Yes 31 1.16 Yes 0 0 No -28 0.56 No 27 74.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 179292886 - NM_015043 TBC1D9B 1 1.7 1.68 59 1 71.72 33 6.93 Yes 20 1.08 Yes 0 0 No -32 0.9 Yes 38 85.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179294384 - NM_015043 TBC1D9B 1 0.37 0.36 22 7.42 84.55 22 7.14 Yes 9 1.89 Yes 21 0.92 Yes -21 0.82 Yes 49 93.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 179294496 - NM_015043 TBC1D9B 1 3.64 3.57 69 10.49 85.44 88 12.61 Yes 75 1.93 Yes 24 0.66 Yes -24 0.7 Yes 32 74.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 179294855 - NM_015043 TBC1D9B 1 1.21 1.46 52 5.67 73.51 20 7.12 Yes 7 1.87 Yes 24 0.88 Yes -19 0.62 No 51 91.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 179295821 - NM_015043 TBC1D9B 1 0.09 0.11 7 8.51 85.77 27 5.74 Yes 23 1.44 Yes 0 0 No -26 0.88 Yes 44 92.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 179305568 - NM_015043 TBC1D9B 1 0.14 0.13 8 2.36 70.31 70 8.17 Yes 19 1.51 Yes 0 0 No -31 0.61 No 39 90.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 179306728 - NM_015043 TBC1D9B 1 0.17 0.22 14 4.85 81.77 19 4.85 No 34 -1.16 No 29 0.68 Yes -23 0.83 Yes 48 82.31 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 179306731 - NM_015043 TBC1D9B 1 0.07 0.11 7 3.95 81.5 16 4.55 No 31 -1.16 No 29 0.68 Yes -20 0.84 Yes 51 83.33 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 179311138 - NM_015043 TBC1D9B 1 0.29 0.38 21 9.08 86.28 38 6.24 Yes 25 0.38 No 0 0 No -37 0.4 No 41 56.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 179312137 - NM_015043 TBC1D9B 1 1.25 1.74 56 7.05 83.2 19 5.6 Yes 6 1.04 Yes 0 0 No -33 0.38 No 39 67.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 179314905 - NM_015043 TBC1D9B 1 1.65 2.25 55 5.41 81.01 22 5.01 No 58 -1.17 No 21 0.86 Yes -24 0.67 Yes 46 67.3 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 179325004 - NM_015043 TBC1D9B 1 0.11 0.18 11 11.21 89.08 29 7.35 Yes 16 0.94 Yes 0 0 No -28 0.83 Yes 42 68.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 179326102 - NM_015043 TBC1D9B 1 0.11 0.14 8 6.5 80.21 26 6.92 Yes 46 1.76 Yes 0 0 No -25 0.51 No 38 67.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 76987324 - NM_001297738 TBCA 1 0.2 1.65 54 10.6 85.2 24 4.44 No 17 0.33 No 24 0.81 Yes -24 0.72 Yes 46 77.8 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 76989174 - NM_001297738 TBCA 1 0.29 2.49 61 -0.33 0 24 5.1 No 11 0.84 Yes 0 0 No -23 0.95 Yes 47 97.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 76989193 - NM_001297738 TBCA 1 0.05 0.36 19 6.03 76.28 32 5.58 Yes 66 1.32 Yes 19 0.97 Yes -29 0.66 No 41 75.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 76989256 - NM_001297738 TBCA 1 0.07 0.58 30 4.68 78.84 33 5.43 No 14 1.36 Yes 0 0 No -32 0.33 No 38 53.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 76998614 - NM_001297738 TBCA 1 0.02 0.22 14 9.05 85.25 32 6.42 Yes 19 0.8 Yes 0 0 No -27 0.54 No 39 64.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 77001460 - NM_001297738 TBCA 1 0.33 2.68 66 8.03 87.01 15 5.39 No 2 0.85 Yes 26 0.42 Yes -26 0.32 No 56 35.05 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 77007789 - NM_001297738 TBCA 1 0.06 0.26 14 14.38 99.45 31 7.02 Yes 18 2.24 Yes 0 0 No -30 0.39 No 44 73.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 77026281 - NM_001297738 TBCA 1 0.37 1.9 21 7.38 81.76 23 8.77 Yes 10 0.76 No 0 0 No -27 0.63 No 43 51.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 77065487 - NM_001297738 TBCA 1 0.03 0.17 10 4.47 82.65 22 7.07 Yes 9 0.78 Yes 0 0 No -21 0.81 Yes 49 71.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 77070042 - NM_001297738 TBCA 1 0.03 0.13 8 11.08 94.16 22 5.66 Yes 9 0.51 No 0 0 No -27 0.54 No 43 61.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36608692 + NM_001281 TBCB 1 0.06 0.13 8 2.26 0 28 4.03 No 72 0.45 No 27 0.69 Yes -27 0.75 Yes 43 82.26 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 36615151 + NM_001281 TBCB 1 0.43 0.65 32 5.45 83.87 33 6.24 Yes 70 0.55 No 0 0 No -32 0.83 Yes 38 87.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 186269448 - NM_001286749 TBCCD1 1 0.26 0.14 8 9.24 81.59 48 7.51 Yes 35 0.54 No 0 0 No -29 0.89 Yes 41 78.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 186271393 - NM_001286749 TBCCD1 1 2.43 1.24 39 5.79 84.61 36 7.75 Yes 23 2.22 Yes 35 0.89 Yes -35 0.72 Yes 35 81.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 186272819 - NM_001286749 TBCCD1 1 1.38 0.79 33 7.73 73.48 32 5.1 No 69 0.99 Yes 0 0 No -31 0.63 No 39 79.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 80717386 + NM_005993 TBCD 1 0.27 0.22 13 8.21 99.17 28 6.63 Yes 67 -3.06 No 0 0 No -27 0.82 Yes 43 92.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80718293 + NM_005993 TBCD 1 0.35 0.28 18 9.16 87.38 28 7.08 Yes 15 1.31 Yes 0 0 No -27 0.86 Yes 43 84.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80724756 + NM_005993 TBCD 1 0.27 0.33 21 6.75 84.07 25 5.38 No -2 -0.73 No 0 0 No -24 0.78 Yes 46 74.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80725337 + NM_005993 TBCD 1 0.17 0.22 14 4.26 83.21 33 4.86 No 20 1.05 Yes 0 0 No -32 0.59 No 38 60.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80741336 + NM_005993 TBCD 1 4.07 2.39 61 7.69 90.1 45 6.03 Yes 54 0.54 No 0 0 No -21 0.7 Yes 49 79.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80764303 + NM_005993 TBCD 1 0.44 0.28 16 3.91 88.03 44 5.96 Yes 54 1.57 Yes 0 0 No -21 0.44 No 49 41.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80772722 + NM_005993 TBCD 1 0.43 0.19 9 4.59 0 10 4 No 34 0.48 No 0 0 No -27 0.95 Yes 43 94.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80853576 + NM_005993 TBCD 1 0.39 0.58 27 9.14 83.22 27 5.57 Yes 26 -1.53 No 0 0 No -26 0.95 Yes 44 85.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 80858471 + NM_005993 TBCD 1 0.11 0.17 11 8.45 86.78 25 5.71 Yes 3 0.99 Yes 0 0 No -24 0.84 Yes 46 85.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80864050 + NM_005993 TBCD 1 0.22 0.25 9 5.19 82 32 6.22 Yes 66 1.67 Yes 0 0 No -31 0.93 Yes 39 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 80871215 + NM_005993 TBCD 1 0.69 0.53 29 7.15 77.68 36 5.97 Yes 23 0.91 Yes 35 0.64 Yes -35 0.78 Yes 35 86.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 80882011 + NM_005993 TBCD 1 0.41 0.31 15 3.6 85.02 17 6.93 Yes 4 1.2 Yes 0 0 No -27 0.43 No 54 67.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 80895721 + NM_005993 TBCD 1 0.24 0.17 11 7.71 81.28 22 4.04 No -1 0.32 No 21 0.75 Yes -21 0.78 Yes 49 83.72 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 235569481 + NM_001079515 TBCE 1 0.19 0.13 7 9.06 84.69 26 6.02 Yes 70 0.91 Yes 0 0 No -25 0.64 No 45 73.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 235582731 + NM_001079515 TBCE 1 1.8 0.76 40 7.24 86.79 96 8.78 Yes 10 0.82 Yes 22 0.83 Yes -29 0.49 No 41 75.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 235596260 + NM_001079515 TBCE 1 11.35 4.07 71 -0.96 43.59 41 8.71 Yes 18 0.76 No 30 0.69 Yes -40 0.43 No 30 45.88 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 120906441 + NM_152715 TBCEL 1 4.01 0.68 31 8.49 84.36 24 4.6 No 11 1.02 Yes 26 0.69 Yes -26 0.54 No 47 60.36 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 120907213 + NM_152715 TBCEL 1 20.93 3.28 68 10.49 86.83 25 5.48 No 50 1 Yes 25 0.85 Yes -29 0.59 No 45 77.15 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 120916045 + NM_152715 TBCEL 1 1.36 0.26 14 10.07 89.4 28 6.32 Yes 15 1.38 Yes 0 0 No -21 0.67 Yes 49 63.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 120924338 + NM_152715 TBCEL 1 5.63 2.93 69 8.01 79.95 38 5.4 No 25 0.87 Yes 25 0.67 Yes -24 0.48 No 46 69.36 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 120928216 + NM_152715 TBCEL 1 0.87 0.35 21 10.59 77.42 34 6.29 Yes 33 0.36 No 33 0.7 Yes -33 0.86 Yes 37 94.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 120943693 + NM_152715 TBCEL 1 3.33 1.24 50 10.82 94.17 29 7.16 Yes 46 0.23 No 0 0 No -28 0.87 Yes 42 88.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 107010763 - NM_001290768 TBCK 1 1.92 0.4 25 9.31 95.08 21 5.7 Yes 8 1.07 Yes 0 0 No -20 0.41 No 50 64.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 107012836 - NM_001290768 TBCK 1 0.8 0.15 9 2.96 70.17 16 5.07 No 37 1.09 Yes 0 0 No -25 0.68 Yes 21 52.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 107012903 - NM_001290768 TBCK 1 13.22 2.5 64 9.19 89.85 33 4.5 No 35 0.63 No 0 0 No -26 0.51 No 44 60.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 107085619 - NM_001290768 TBCK 1 6.63 3.82 71 9.26 82.84 21 6.07 Yes 8 0.58 No 32 0.31 Yes -20 0.52 No 42 61.78 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 107087770 - NM_001290768 TBCK 1 0.54 0.31 16 8.32 94.09 29 5.84 Yes 16 0.73 No 0 0 No -29 0.76 Yes 41 83.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 107130179 - NM_001290768 TBCK 1 0.29 0.18 12 8.46 77.7 56 6.01 Yes 14 0.48 No 0 0 No -26 0.96 Yes 44 95.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 107131598 - NM_001290768 TBCK 1 0.47 0.29 16 7.18 92.2 34 5.46 No 6 0.45 No 0 0 No -26 0.74 Yes 44 62.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 107157650 - NM_001290768 TBCK 1 0.3 0.21 14 4.77 76.56 20 5.48 No 7 1.12 Yes 0 0 No -19 0.69 Yes 51 63.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 107158696 - NM_001290768 TBCK 1 2.52 1.25 51 8.68 76.46 24 6 Yes 11 0.1 No 23 0.63 Yes -23 0.45 No 41 46 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 107164182 - NM_001290768 TBCK 1 5.43 3.08 70 7.7 85.1 22 4.93 No 1 0.51 No 0 0 No -21 0.59 No 49 56.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 107165142 - NM_001290768 TBCK 1 0.16 0.1 7 8.86 87.03 24 6.4 Yes 70 1.11 Yes 0 0 No -23 0.89 Yes 47 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 107165898 - NM_001290768 TBCK 1 1.25 0.44 27 2.29 80.03 29 4.35 No 28 0.27 No 0 0 No -28 0.79 Yes 42 71.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 107170156 - NM_001290768 TBCK 1 0.17 0.11 8 2.8 78.07 11 4.9 No 56 0.57 No 22 0.93 Yes -23 0.37 No 53 36.9 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 107181692 - NM_001290768 TBCK 1 1.01 0.44 22 3.18 66.06 54 6.23 Yes 71 0.37 No 28 0.87 Yes -23 0.41 No 39 47.64 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 107225927 - NM_001290768 TBCK 1 2.4 1.22 44 8.08 92.27 31 7.46 Yes 65 0.03 No 0 0 No -30 0.78 Yes 40 76.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 64849696 + NM_013254 TBK1 1 1.53 0.74 32 7.95 77.59 31 6.75 Yes -3 1.01 Yes 30 0.84 Yes -30 0.91 Yes 40 88.16 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 64851530 + NM_013254 TBK1 1 0.43 0.38 24 8.72 80.01 30 6.71 Yes 17 0.3 No 0 0 No -29 0.84 Yes 41 85.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 64854026 + NM_013254 TBK1 1 1.82 1.5 43 3.4 85.74 22 4.79 No 9 0.76 No 0 0 No -21 0.55 No 49 68.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 64858352 + NM_013254 TBK1 1 0.1 0.14 9 3.66 68.71 27 5.65 Yes 50 0.74 No 0 0 No -26 0.78 Yes 44 62.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 64860758 + NM_013254 TBK1 1 0.1 0.17 10 4.65 75.4 29 4.63 No 69 -4.89 No 0 0 No -28 0.71 Yes 42 61.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 64862352 + NM_013254 TBK1 1 0.04 0.1 7 2.18 76.24 24 3.82 No 46 0.06 No 0 0 No -23 0.96 Yes 47 95.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 64865523 + NM_013254 TBK1 1 0.11 0.25 17 11.04 90.55 16 5.39 No 3 0.75 No 0 0 No -27 0.65 No 49 71.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 64869419 + NM_013254 TBK1 1 0.1 0.22 12 5.39 75.87 31 5.92 Yes 18 0.62 No 0 0 No -30 0.52 No 40 70.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 64873491 + NM_013254 TBK1 1 0.06 0.11 8 6.53 83.1 27 6.32 Yes 14 1.2 Yes 0 0 No -26 0.88 Yes 44 91.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 64875631 + NM_013254 TBK1 1 0.08 0.13 9 1.51 0 13 4.33 No 18 0.42 No 0 0 No -35 0.55 No 40 52.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 64879737 + NM_013254 TBK1 1 0.18 0.24 12 8.5 87.49 27 5.57 Yes 40 1.28 Yes 0 0 No -26 0.7 Yes 44 68.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 64888532 + NM_013254 TBK1 1 0.1 0.18 12 11.55 95.02 29 5.28 No 16 0.4 No 0 0 No -28 0.5 No 42 57.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 64889761 + NM_013254 TBK1 1 2.21 3.72 70 4.68 77.27 30 7.08 Yes 51 0.57 No 0 0 No -30 0.65 No 40 72.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 64890946 + NM_013254 TBK1 1 0.26 0.35 20 -0.97 0 43 5.09 No 10 0.77 No 0 0 No -32 0.39 No 43 56.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 64892846 + NM_013254 TBK1 1 1.53 2.01 62 4.22 81.21 39 8.94 Yes 26 1.88 Yes 0 0 No -38 0.75 Yes 32 91.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 9487096 + NM_001139467 TBL1X 1 0.35 0.11 8 10.83 76.52 35 7.07 Yes 22 2.62 Yes 0 0 No -34 0.68 Yes 36 93.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 9502939 + NM_001139467 TBL1X 1 2.28 0.69 31 11.74 86.23 32 8.9 Yes 19 1.38 Yes 31 0.7 Yes -28 0.54 No 39 61.35 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 9504312 + NM_001139467 TBL1X 1 1.02 0.26 15 10.69 88.27 22 5.25 No 9 0.61 No 0 0 No -21 0.9 Yes 49 87.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 9529933 + NM_001139467 TBL1X 1 1.37 0.35 19 7.96 89.38 26 5.2 No -2 0.87 Yes 0 0 No -25 0.73 Yes 45 48.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 9571069 + NM_001139467 TBL1X 1 1.06 0.28 16 5.67 93.32 25 5.1 No 12 0.07 No 0 0 No -24 0.65 No 46 67.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 9612716 + NM_001139467 TBL1X 1 0.7 0.1 7 11.77 88.27 45 7.26 Yes 32 1.09 Yes 44 0.29 Yes -44 0.86 Yes 26 75.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 176744259 - NM_001321193 TBL1XR1 1 0.35 0.76 33 5.32 0 29 5.72 Yes 67 0.67 No 0 0 No -28 0.64 No 42 67.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 176750129 - NM_001321193 TBL1XR1 1 0.11 0.26 17 9.34 88.45 34 5.76 Yes 66 1.59 Yes 0 0 No -31 0.38 No 39 51.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 176750448 - NM_001321193 TBL1XR1 1 0.2 0.5 22 5.61 72.18 24 5.21 No 11 0.73 No 0 0 No -23 0.62 No 47 87.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 176752112 - NM_001321193 TBL1XR1 1 0.06 0.15 10 -6.55 0 31 9.06 Yes 51 0.43 No 0 0 No -30 0.61 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 176755631 - NM_001321193 TBL1XR1 1 0.13 0.31 16 1.76 67.83 13 3.82 No 0 0.34 No 0 0 No -25 0.75 Yes 45 63.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 176769466 - NM_001321193 TBL1XR1 1 0.21 0.53 31 6.58 79.08 23 5 No 69 0.54 No 0 0 No -22 0.68 Yes 48 72.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 176797734 - NM_001321193 TBL1XR1 1 8.12 9.99 72 9.01 86.65 23 5 No 10 0.89 Yes 22 0.92 Yes -22 0.9 Yes 48 93.6 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 176797734 - NM_001321193 TBL1XR1 1 0.25 0.33 21 9.01 86.65 23 5 No 10 0.89 Yes 22 0.92 Yes -22 0.9 Yes 48 93.6 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 176798210 - NM_001321193 TBL1XR1 1 0.24 0.29 16 7.04 89.55 34 7.09 Yes 21 1.81 Yes 0 0 No -33 0.7 Yes 37 79.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 176804830 - NM_001321193 TBL1XR1 1 0.27 0.28 16 8.82 80.18 28 7.93 Yes 66 -1.79 No 27 0.52 Yes -29 0.57 No 43 75.67 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 176808969 - NM_001321193 TBL1XR1 1 0.23 0.29 13 4.39 77.38 40 7.06 Yes 27 1.87 Yes 27 0.78 Yes -39 0.86 Yes 31 90.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 176828676 - NM_001321193 TBL1XR1 1 0.93 0.17 10 7.61 80.63 36 5.81 Yes 57 0.61 No 0 0 No -35 0.27 No 44 45.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 176849238 - NM_001321193 TBL1XR1 1 9.7 1.54 48 11.26 85.78 33 5.9 Yes 36 1.25 Yes 32 0.74 Yes -32 0.61 No 38 85.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 176878777 - NM_001321193 TBL1XR1 1 22.12 3.29 68 3.01 0 23 5.98 Yes 74 1.17 Yes 30 0.45 Yes -28 0.53 No 42 74.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 176878781 - NM_001321193 TBL1XR1 1 2.66 0.4 21 1.71 84.41 19 5.65 Yes 70 1.18 Yes 30 0.45 Yes -24 0.55 No 46 75.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 176878805 - NM_001321193 TBL1XR1 1 0.75 0.15 9 -2.84 0 15 4.36 No 46 1.16 Yes 30 0.45 Yes -36 0.57 No 34 55.27 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 176881790 - NM_001321193 TBL1XR1 1 1.48 0.22 14 9.07 97.68 23 5.29 No 25 0.99 Yes 0 0 No -22 0.75 Yes 48 78.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 176913453 - NM_001321193 TBL1XR1 1 1.93 0.29 17 8.76 86.31 27 5.78 Yes 51 1.05 Yes 0 0 No -30 0.51 No 40 56.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 72985643 - NM_012453 TBL2 1 1.17 0.56 26 7.15 80.57 19 5.47 No 73 -4.96 No 0 0 No -23 0.86 Yes 47 86.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 72986366 - NM_012453 TBL2 1 3.61 1.56 54 7.62 83.55 28 5.29 No 72 -1.27 No 27 0.79 Yes -27 0.73 Yes 43 63.69 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 72987276 - NM_012453 TBL2 1 0.8 0.49 26 4.46 75.98 28 3.16 No 39 1.51 Yes 0 0 No -27 0.88 Yes 43 79.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 72988386 - NM_012453 TBL2 1 0.14 0.1 7 7.32 77.51 28 5.82 Yes 22 -3.51 No 28 0.66 Yes -22 0.58 No 42 53.31 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 72989135 - NM_012453 TBL2 1 1.19 0.57 30 3.29 0 54 7.28 Yes 41 1.41 Yes 29 0.03 Yes -48 0.49 No 22 61.91 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 72991032 - NM_012453 TBL2 1 3.35 1.6 50 9.14 93.72 28 5.46 No 67 -3.97 No 23 0.49 Yes -23 0.71 Yes 47 67.26 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 2026844 + NM_006453 TBL3 1 0.15 0.15 11 -1.94 0 27 5.39 No 51 1.13 Yes 0 0 No -26 0.82 Yes 44 55.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2028315 + NM_006453 TBL3 1 0.56 0.69 32 -8.28 75.36 22 5.25 No 68 -4.13 No 0 0 No -21 0.89 Yes 49 54.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 170873604 + NM_001172085 TBP 1 0.13 0.14 10 -0.95 0 22 3.95 No 24 2.08 Yes 34 0.55 Yes -36 0.44 No 55 29.45 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 170876313 + NM_001172085 TBP 1 0.47 0.28 17 4.76 67.27 23 5.74 Yes 64 0.75 No 0 0 No -26 0.66 No 44 78.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 170878704 + NM_001172085 TBP 1 0.19 0.11 8 1.44 0 29 5.69 Yes 16 1.66 Yes 0 0 No -24 0.69 Yes 46 70.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 134289992 + NM_004865 TBPL1 1 2.66 2.04 56 4.47 84.47 20 7.14 Yes 7 1.16 Yes 19 0.64 Yes -19 0.71 Yes 51 87.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 134302127 + NM_004865 TBPL1 1 0.16 0.18 12 3.97 84.41 33 5.18 No 16 0.98 Yes 0 0 No -32 0.52 No 38 79.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 134303688 + NM_004865 TBPL1 1 0.32 0.33 19 -3.57 0 14 4.12 No 71 -5.28 No 22 0.9 Yes -13 0.73 Yes 39 50.74 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 134303709 + NM_004865 TBPL1 1 0.62 0.69 32 -0.5 0 27 5.47 No 14 0.55 No 0 0 No -26 0.79 Yes 44 86.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 134305765 + NM_004865 TBPL1 1 0.12 0.18 12 -0.36 61.26 41 6.93 Yes 28 0.95 Yes 0 0 No -34 0.87 Yes 36 78.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 134307021 + NM_004865 TBPL1 1 0.19 0.25 13 11.33 87.94 25 5.57 Yes 34 -1.4 No 24 0.43 Yes -29 0.67 Yes 46 62.45 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 124496588 + NM_032811 TBRG1 1 8.01 1.86 53 5.29 75.93 26 5.66 Yes 13 0.84 Yes 25 0.89 Yes -25 0.91 Yes 45 87.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 124496591 + NM_032811 TBRG1 1 0.9 0.24 13 5.69 79.22 29 5.92 Yes 16 0.82 Yes 0 0 No -28 0.91 Yes 42 87.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 124496708 + NM_032811 TBRG1 1 18.62 4.4 71 9.44 85.3 19 6.4 Yes 6 0.6 No 29 0.77 Yes -43 0.67 Yes 27 71.13 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 124496588 + NM_032811 TBRG1 1 0.94 0.21 11 5.29 75.93 26 5.66 Yes 13 0.84 Yes 25 0.89 Yes -25 0.91 Yes 45 87.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 124496708 + NM_032811 TBRG1 1 1.1 0.32 19 9.44 85.3 19 6.4 Yes 6 0.6 No 29 0.77 Yes -43 0.67 Yes 27 71.13 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 124500702 + NM_032811 TBRG1 1 0.15 0.14 9 6.85 89.93 25 6 Yes 33 2.14 Yes 0 0 No -24 0.85 Yes 46 91.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 124501132 + NM_032811 TBRG1 1 0.24 0.15 9 1.15 74.53 25 5.38 No 29 0.67 No 27 0.83 Yes -24 0.86 Yes 46 89.13 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 124501135 + NM_032811 TBRG1 1 0.47 0.28 19 3.99 86.69 28 5.66 Yes 32 0.67 No 27 0.83 Yes -27 0.86 Yes 43 88.11 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 45148843 - NM_004749 TBRG4 1 5.45 5.9 71 8.19 88.26 27 5.48 No 34 -0.87 No 26 0.6 Yes -26 0.7 Yes 44 77.35 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 139580068 + NM_001166254 TBXAS1 1 0.47 0.11 8 4.97 64.76 35 5.86 Yes 69 0.82 Yes 0 0 No -40 0.71 Yes 30 85.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 139581914 + NM_001166254 TBXAS1 1 0.68 0.24 12 6.56 73.92 26 5.49 No 23 0.83 Yes 0 0 No -25 0.66 No 45 71.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 139584224 + NM_001166254 TBXAS1 1 2.87 0.51 25 7.32 92.4 25 5.64 Yes 67 0.66 No 0 0 No -20 0.49 No 50 60.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 139644883 + NM_001166254 TBXAS1 1 1.89 0.49 23 6.38 84.96 20 4.8 No 7 0.98 Yes 0 0 No -19 0.81 Yes 51 83.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 139652349 + NM_001166254 TBXAS1 1 0.44 0.14 7 6.1 81.34 21 5.1 No 69 0.05 No 25 0.29 Yes -26 0.31 No 44 25.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 139655965 + NM_001166254 TBXAS1 1 0.33 0.1 7 8.15 86.73 37 5.07 No 51 0.11 No 0 0 No -22 0.61 No 48 63.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 139671693 + NM_001166254 TBXAS1 1 2.24 0.29 16 9.55 86.02 51 8.04 Yes 1 2.01 Yes 0 0 No -50 0.6 No 20 59.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 92250234 - NM_152332 TC2N 1 0.17 0.13 8 6.23 74.47 20 6.25 Yes 7 1.73 Yes 0 0 No -23 0.4 No 48 42.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 92250301 - NM_152332 TC2N 1 1.54 0.79 32 1.72 79.41 24 3.63 No 35 1.69 Yes 0 0 No -23 0.38 No 23 52.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 92277482 - NM_152332 TC2N 1 0.46 0.24 11 7.43 85.59 79 6.22 Yes 4 0.3 No 0 0 No -25 0.88 Yes 45 52.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 92277937 - NM_152332 TC2N 1 0.57 0.29 17 11.49 94.92 33 6.12 Yes 20 1.35 Yes 0 0 No -32 0.75 Yes 38 63.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 44381178 + NM_001029839 TCAIM 1 0.46 0.21 14 10.72 89.78 36 7.64 Yes 23 0.51 No 29 0.72 Yes -39 0.49 No 31 42.52 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 44400599 + NM_001029839 TCAIM 1 1.39 0.64 28 2.38 83.06 21 4.35 No 36 0.38 No 0 0 No -20 0.83 Yes 50 76.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44400602 + NM_001029839 TCAIM 1 0.51 0.22 14 1.89 82.84 24 4.62 No 39 0.38 No 0 0 No -23 0.83 Yes 47 73.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 54886719 - NM_201437 TCEA1 1 0.05 0.29 17 10.22 93.33 61 7.34 Yes 33 1.04 Yes 0 0 No -26 0.78 Yes 44 39.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 54890476 - NM_201437 TCEA1 1 0.08 0.47 27 10.22 99.45 19 5.37 No 67 1.07 Yes 0 0 No -28 0.42 No 46 48.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 54891258 - NM_201437 TCEA1 1 0.14 0.85 40 9.37 85.57 26 5.2 No 18 0.05 No 25 0.74 Yes -25 0.54 No 42 57.04 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 54904227 - NM_201437 TCEA1 1 0.02 0.11 7 5.41 90.92 28 4.25 No 61 1.61 Yes 0 0 No -27 0.5 No 12 47.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 54906063 - NM_201437 TCEA1 1 0.05 0.24 14 9.58 95.02 18 6.15 Yes 5 1.34 Yes 0 0 No -31 0.45 No 53 61.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 54912192 - NM_201437 TCEA1 1 0.08 0.5 30 7.43 94.32 31 6.44 Yes -4 0.14 No 0 0 No -29 0.5 No 40 49.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 54923053 - NM_201437 TCEA1 1 3016.65 308.79 72 7.48 91.54 20 5.59 Yes 68 0.81 Yes 25 0.64 Yes -25 0.87 Yes 45 83.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 54934147 - NM_201437 TCEA1 1 2.37 0.24 15 5.92 83.5 33 6.32 Yes 13 0.51 No 25 0.66 Yes -26 0.31 No 40 28.05 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 62701606 + NM_198723 TCEA2 1 1.61 0.11 8 -5.11 0 20 5.1 No 7 -0.94 No 25 0.89 Yes -7 0.82 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 62701844 + NM_198723 TCEA2 1 1.78 0.21 14 -10.27 67.38 26 5.66 Yes 13 0.64 No 22 0.93 Yes -25 0.88 Yes 45 86.68 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 102863970 + NM_001006933 TCEAL3 1 4.15 2.25 65 1.65 0 41 7.65 Yes 45 1.8 Yes 35 0.86 Yes -40 0.8 Yes 30 89.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 102841581 + NM_024863 TCEAL4 1 9.85 9.78 70 1.88 0 58 7.96 Yes 45 1.79 Yes 27 0.29 Yes -57 0.85 Yes 13 76.08 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 54520671 + NM_153035 TCEANC2 1 4.43 2.07 62 10.47 95.1 27 5.15 No 43 0.39 No 0 0 No -43 0.29 No 46 52.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 54523048 + NM_153035 TCEANC2 1 3.6 1.69 61 10.07 88.27 30 7.81 Yes 17 1.65 Yes 0 0 No -29 0.92 Yes 41 95.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 54537509 + NM_153035 TCEANC2 1 0.33 0.14 10 2.98 0 33 5.56 Yes 49 0.64 No 0 0 No -36 0.39 No 29 59.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 54551427 + NM_153035 TCEANC2 1 0.42 0.18 10 10.68 88.58 26 7.46 Yes 13 1.39 Yes 0 0 No -25 0.69 Yes 45 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 145834080 + NM_001040006 TCERG1 1 0.29 0.43 20 4.64 72.49 27 6.15 Yes 14 1.19 Yes 0 0 No -26 0.85 Yes 44 89.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 145841580 + NM_001040006 TCERG1 1 6.26 5.31 72 2.06 75.37 43 6.4 Yes 22 -3.03 No 20 0.42 Yes -20 0.55 No 38 48.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 145843197 + NM_001040006 TCERG1 1 2.6 2.26 60 7.33 85.26 18 4.07 No 5 0.22 No 0 0 No -29 0.71 Yes 41 71.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 145847903 + NM_001040006 TCERG1 1 28.43 32.38 72 10.67 92.66 28 4.79 No 66 0.6 No 28 0.66 Yes -27 0.69 Yes 43 76.08 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 145860678 + NM_001040006 TCERG1 1 0.15 0.13 8 8.08 86.12 37 5.14 No 76 1.03 Yes 24 0.79 Yes -36 0.38 No 41 56.87 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 145860712 + NM_001040006 TCERG1 1 12.85 10.42 71 6.67 86.85 15 5.33 No 2 1.14 Yes 24 0.79 Yes -24 0.78 Yes 46 88.66 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 145861009 + NM_001040006 TCERG1 1 0.12 0.1 7 7.72 75.08 27 7.79 Yes 76 0.35 No 0 0 No -26 0.7 Yes 44 69.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 145863886 + NM_001040006 TCERG1 1 0.13 0.29 13 3.68 74.84 34 6.49 Yes 21 1.06 Yes 0 0 No -33 0.53 No 37 81.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 145879388 + NM_001040006 TCERG1 1 0.45 0.51 28 3.07 70.33 60 9.37 Yes 51 1.64 Yes 0 0 No -31 0.53 No 39 55.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 145883371 + NM_001040006 TCERG1 1 0.11 0.15 9 -11.24 0 16 4.36 No 52 -1.89 No 21 0.79 Yes -15 0.56 No 22 33.64 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 145883926 + NM_001040006 TCERG1 1 0.31 0.56 25 7.53 72.84 33 6.64 Yes 9 1.18 Yes 21 0.73 Yes -31 0.69 Yes 38 52.18 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 145887195 + NM_001040006 TCERG1 1 1.09 2.14 61 4.16 77.54 26 4.62 No 31 0.97 Yes 0 0 No -22 0.41 No 38 63.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 145887307 + NM_001040006 TCERG1 1 0.15 0.33 15 7.31 69.98 26 6.71 Yes 13 1.79 Yes 25 0.92 Yes -25 0.86 Yes 45 85.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 145887423 + NM_001040006 TCERG1 1 0.07 0.13 8 1.48 0 32 5.23 No 23 0.21 No 27 0.8 Yes -25 0.32 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 145889629 + NM_001040006 TCERG1 1 7.27 8.88 71 6.64 77.97 25 4.57 No 54 1.03 Yes 24 0.78 Yes -24 0.67 Yes 46 61.39 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 57254655 + NM_001322151 TCF12 1 0.2 0.21 13 3.16 76.66 23 6.01 Yes 10 1.42 Yes 0 0 No -22 0.64 No 48 84.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 57285307 + NM_001322151 TCF12 1 0.28 0.36 19 9.92 93.82 22 5.46 No 24 0.94 Yes 0 0 No -21 0.76 Yes 49 91.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57285629 + NM_001322151 TCF12 1 0.2 0.24 13 4.54 78.2 66 8.77 Yes 53 1.53 Yes 0 0 No -32 0.94 Yes 38 92.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57293546 + NM_001322151 TCF12 1 0.61 0.79 39 7.42 90.69 24 4.19 No 44 1.93 Yes 23 0.4 Yes -23 0.46 No 47 80.6 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 57296451 + NM_001322151 TCF12 1 0.33 0.44 23 4.58 84.41 40 6.14 Yes 27 1.59 Yes 0 0 No -29 0.75 Yes 41 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57327480 + NM_001322151 TCF12 1 0.19 0.25 13 8.38 87.07 23 5.31 No 10 1.21 Yes 0 0 No -22 0.68 Yes 48 67.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 57364850 + NM_001322151 TCF12 1 0.08 0.11 7 7.63 88.97 30 5.63 Yes 68 -4.46 No 29 0.58 Yes -29 0.6 No 41 47.79 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 57356404 + NM_001322151 TCF12 1 0.09 0.14 7 7.54 83.05 37 6.08 Yes 24 2.13 Yes 0 0 No -36 0.75 Yes 34 87.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57364850 + NM_001322151 TCF12 1 3.69 5.74 72 7.63 88.97 30 5.63 Yes 68 -4.46 No 29 0.58 Yes -29 0.6 No 41 47.79 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 57385171 + NM_001322151 TCF12 1 0.18 0.21 13 7.08 81.71 12 5.83 Yes -1 0.45 No 0 0 No -29 0.58 No 41 86.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 57385688 + NM_001322151 TCF12 1 0.96 1.06 44 7.72 81.61 59 5.64 Yes 9 1.31 Yes 0 0 No -29 0.81 Yes 41 81.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57387274 + NM_001322151 TCF12 1 0.09 0.1 7 7.54 83.68 23 4.4 No 10 0.91 Yes 0 0 No -30 0.45 No 48 40.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 57419722 + NM_001322151 TCF12 1 0.45 0.53 28 10.54 92.77 35 6.07 Yes 5 0.42 No 0 0 No -32 0.49 No 36 66.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 57421980 + NM_001322151 TCF12 1 1.36 1.47 46 10.03 86.35 28 6.4 Yes 15 1.38 Yes 27 0.66 Yes -34 0.66 No 36 74.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 57463024 + NM_001322151 TCF12 1 0.12 0.11 8 11.15 88.27 23 11.28 Yes 10 0.49 No 0 0 No -23 0.21 No 48 28.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 57484360 + NM_001322151 TCF12 1 0.11 0.11 7 0.49 0 33 6.93 Yes 20 1.22 Yes 0 0 No -32 0.73 Yes 38 79.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57517452 + NM_001322151 TCF12 1 0.14 0.26 13 7.93 85.05 43 7.6 Yes 30 1.77 Yes 0 0 No -42 0.74 Yes 28 86.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57536843 + NM_001322151 TCF12 1 0.15 0.28 15 8.51 86.62 21 7.21 Yes 8 1.25 Yes 0 0 No -20 0.9 Yes 50 93.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57545462 + NM_001322151 TCF12 1 33.81 2.26 60 0.56 67.5 34 6.86 Yes 21 1.35 Yes 0 0 No -33 0.83 Yes 37 77.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57545462 + NM_001322151 TCF12 1 4.3 0.28 17 0.56 67.5 34 6.86 Yes 21 1.35 Yes 0 0 No -33 0.83 Yes 37 77.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57564471 + NM_001322151 TCF12 1 0.22 0.28 17 8.3 76.6 69 10.25 Yes 39 0.85 Yes 0 0 No -26 0.53 No 32 57.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 57565230 + NM_001322151 TCF12 1 10.16 13.19 72 3.46 89.97 33 6.08 Yes 20 0.98 Yes 29 0.86 Yes -32 0.64 No 38 92.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 57579720 + NM_001322151 TCF12 1 0.16 0.19 9 9.57 82.16 27 4.2 No -4 0.78 Yes 0 0 No -26 0.75 Yes 44 81.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 42564710 - NM_181492 TCF20 1 31.6 11.56 72 12.2 84.12 36 6.48 Yes 23 0.59 No 35 0.77 Yes -35 0.8 Yes 35 90.58 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 42564743 - NM_181492 TCF20 1 25.77 9.43 72 3.07 80.47 115 11.31 Yes 44 1.3 Yes 35 0.29 Yes -37 0.58 No 22 65.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 89940861 + NM_014972 TCF25 1 0.25 0.31 17 8.87 91.81 30 5.24 No NA NA NA 0 0 No -22 0.73 Yes 48 80.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89941206 + NM_014972 TCF25 1 1.31 1.64 52 10.18 86.87 27 7.6 Yes 14 1.55 Yes 26 0.93 Yes -26 0.95 Yes 44 96.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89944868 + NM_014972 TCF25 1 6.21 7.81 72 13.15 92.63 31 7.44 Yes 18 1.06 Yes 30 0.72 Yes -30 0.68 Yes 40 84.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89961490 + NM_014972 TCF25 1 0.17 0.38 19 8.62 82.33 15 5.38 No 2 1.78 Yes 23 0.94 Yes -23 0.92 Yes 47 89.65 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89961424 + NM_014972 TCF25 1 0.2 0.42 20 6.85 92.93 17 4.8 No 4 1.28 Yes 23 0.62 Yes -16 0.62 No 54 79.68 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 89961490 + NM_014972 TCF25 1 3.38 7.04 72 8.62 82.33 15 5.38 No 2 1.78 Yes 23 0.94 Yes -23 0.92 Yes 47 89.65 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89971159 + NM_014972 TCF25 1 0.42 0.72 37 4.64 77.37 23 5.27 No 29 1.15 Yes 22 0.88 Yes -22 0.65 No 48 69.7 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 89971349 + NM_014972 TCF25 1 0.43 0.74 37 2.81 0 26 5.48 No 13 0.71 No 0 0 No -25 0.92 Yes 45 91.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89973253 + NM_014972 TCF25 1 0.07 0.15 10 4.68 81 12 4.76 No -1 1.05 Yes 0 0 No -19 0.64 No 51 83.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 89973256 + NM_014972 TCF25 1 0.16 0.31 16 4.46 76.07 15 5.03 No 2 0.84 Yes 0 0 No -22 0.67 Yes 48 77.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89973544 + NM_014972 TCF25 1 0.23 0.46 23 4.06 79.61 23 5.39 No 51 0.05 No 0 0 No -22 0.51 No 48 77.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 89973547 + NM_014972 TCF25 1 0.09 0.17 7 8.06 86.22 26 5.66 Yes 54 0.05 No 0 0 No -25 0.53 No 45 76.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 89975373 + NM_014972 TCF25 1 10.77 18.14 72 10.47 92.03 22 5.15 No 9 0.82 Yes 21 0.93 Yes -21 0.88 Yes 49 90.65 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89976206 + NM_014972 TCF25 1 0.11 0.19 12 5.34 85.7 28 5.2 No 24 0.55 No 23 0.2 Yes -27 0.84 Yes 43 92.13 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 89976619 + NM_014972 TCF25 1 0.12 0.18 11 3.82 82.38 21 5.2 No 8 0.09 No 0 0 No -20 0.65 No 50 49.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89977468 + NM_014972 TCF25 1 0.33 0.38 20 0.49 0 20 4.58 No NA NA NA 0 0 No -16 0.59 No 50 44.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1611870 - NM_003200 TCF3 1 0.16 0.15 10 7.81 81.49 35 10.25 Yes 22 1.12 Yes 25 0.77 Yes -34 0.93 Yes 36 96.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1612430 - NM_003200 TCF3 1 3.57 3.68 70 2.19 74.16 30 5.66 Yes -3 0.83 Yes 26 0.94 Yes -29 0.95 Yes 41 92.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1612430 - NM_003200 TCF3 1 21.26 21.57 72 2.19 74.16 30 5.66 Yes -3 0.83 Yes 26 0.94 Yes -29 0.95 Yes 41 92.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1612433 - NM_003200 TCF3 1 11.18 11.65 72 1.51 70.25 27 5.39 No 18 -2.12 No 26 0.94 Yes -26 0.94 Yes 44 94.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 1612433 - NM_003200 TCF3 1 145.62 147.33 72 1.51 70.25 27 5.39 No 18 -2.12 No 26 0.94 Yes -26 0.94 Yes 44 94.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 1612475 - NM_003200 TCF3 1 0.83 0.85 37 5.14 77.06 25 5.01 No NA NA NA 26 0.94 Yes -25 0.82 Yes 45 58.98 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 1612475 - NM_003200 TCF3 1 0.44 0.49 28 5.14 77.06 25 5.01 No NA NA NA 26 0.94 Yes -25 0.82 Yes 45 58.98 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 1615480 - NM_003200 TCF3 1 0.46 0.57 34 0.75 0 21 5.68 Yes 68 1.39 Yes 0 0 No -29 0.51 No 47 38.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1615485 - NM_003200 TCF3 1 2 2.46 62 8.8 86.34 16 5.23 No 63 1.4 Yes 24 0.58 Yes -24 0.55 No 52 39.04 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 1615515 - NM_003200 TCF3 1 0.14 0.19 11 -1.03 0 46 9.38 Yes 33 1.43 Yes 40 0.68 Yes -45 0.94 Yes 25 93.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1615832 - NM_003200 TCF3 1 0.14 0.35 18 4.25 72.03 21 4.8 No 26 -1.84 No 0 0 No -20 0.73 Yes 50 45.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1619471 - NM_003200 TCF3 1 8.56 25.22 72 2.29 73.85 28 8.12 Yes 15 1.83 Yes 24 0.95 Yes -27 0.91 Yes 43 86.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1630703 - NM_003200 TCF3 1 0.14 0.19 14 6.88 85.06 31 6.08 Yes 39 0.4 No 0 0 No -30 0.95 Yes 40 95.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1630959 - NM_003200 TCF3 1 0.08 0.13 7 5.61 85.74 21 8.12 Yes 8 1.53 Yes 0 0 No -20 0.9 Yes 50 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1632108 - NM_003200 TCF3 1 0.17 0.39 20 -0.1 0 11 4.12 No 18 1.34 Yes 0 0 No -30 0.95 Yes 40 96.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1635009 - NM_003200 TCF3 1 0.79 1.4 50 6.98 87.21 29 5.83 Yes 34 1.87 Yes 0 0 No -28 0.83 Yes 42 87.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1644285 - NM_003200 TCF3 1 0.37 0.72 35 8.29 85.71 39 5.23 No 76 1.29 Yes 0 0 No -19 0.9 Yes 51 93.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1646818 - NM_003200 TCF3 1 0.54 1.13 41 8.83 88.09 18 4.45 No 5 0.87 Yes 0 0 No -23 0.92 Yes 47 91.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1649936 - NM_003200 TCF3 1 0.07 0.1 7 6.45 86.98 13 4.09 No 60 -0.19 No 0 0 No -17 0.7 Yes 53 80.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1650290 - NM_003200 TCF3 1 8.42 3.97 69 -0.61 62.43 57 8.8 Yes 44 1.67 Yes 25 0.62 Yes -56 0.92 Yes 14 93.28 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 52911650 - NM_001330605 TCF4 1 0.07 0.14 8 9.25 95.38 22 5.97 Yes 9 0.49 No 0 0 No -21 0.8 Yes 49 70.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 52920801 - NM_001330605 TCF4 1 0.05 0.11 7 3.02 78.55 27 6.64 Yes 14 0.79 Yes 0 0 No -33 0.65 No 37 60.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 52924620 - NM_001330605 TCF4 1 6.45 12.1 72 4.3 84.76 29 6.31 Yes 10 0.89 Yes 25 0.9 Yes -28 0.82 Yes 42 76.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 52926348 - NM_001330605 TCF4 1 0.07 0.13 7 7.96 86.47 29 6.05 Yes 53 0.93 Yes 0 0 No -28 0.6 No 42 60.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 133480487 + NR_033449 TCF7 1 5.06 2.25 56 1.68 68.47 95 9.46 Yes 76 1.84 Yes 25 0.69 Yes -34 0.5 No 28 49.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 133481891 + NR_033449 TCF7 1 13.93 6.26 69 9.19 87.28 27 6.28 Yes 3 1.1 Yes 26 0.84 Yes -23 0.58 No 44 69.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 61484075 - NM_001301726 TCFL5 1 22.03 1.9 58 7.61 86.1 21 5.66 Yes 54 1.42 Yes 0 0 No -20 0.74 Yes 50 76.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61484630 - NM_001301726 TCFL5 1 1.6 0.14 9 3.55 77.41 27 6.21 Yes 30 -2.89 No 0 0 No -26 0.89 Yes 44 86.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 61484633 - NM_001301726 TCFL5 1 0.76 0.11 8 -0.36 68.81 24 5.96 Yes 27 -2.7 No 0 0 No -23 0.86 Yes 47 86.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 61487578 - NM_001301726 TCFL5 1 0.35 0.18 10 4.41 87.77 27 5.2 No 55 0.95 Yes 0 0 No -26 0.75 Yes 44 9.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 61487602 - NM_001301726 TCFL5 1 1.81 0.83 33 3.97 84.41 44 8.42 Yes 31 0.97 Yes 0 0 No -44 0.68 Yes 27 70.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61488985 - NM_001301726 TCFL5 1 0.84 0.1 7 -6.83 0 10 3.87 No 22 0.05 No 0 0 No -34 0.64 No 36 63.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 61488991 - NM_001301726 TCFL5 1 509.93 62.79 72 2.76 77.36 29 6.96 Yes 16 0.05 No 28 0.55 Yes -28 0.61 No 42 62.93 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 61488991 - NM_001301726 TCFL5 1 2.44 0.26 17 2.76 77.36 29 6.96 Yes 16 0.05 No 28 0.55 Yes -28 0.61 No 42 62.93 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 110341725 + NM_001143852 TCHP 1 0.38 0.14 9 -2.86 0 15 4.22 No 69 1.03 Yes 22 0.95 Yes -20 0.77 Yes 60 55.47 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 67807258 + NM_006019 TCIRG1 1 18.83 14.4 72 11.09 85.09 37 7.45 Yes 24 1.31 Yes 36 0.88 Yes -36 0.78 Yes 34 89.64 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 67807632 + NM_006019 TCIRG1 1 0.41 0.38 18 9 76.17 31 5.67 Yes -2 0.04 No 0 0 No -30 0.74 Yes 40 66.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 67809097 + NM_006019 TCIRG1 1 0.39 0.42 23 8.78 87.5 75 8.65 Yes 62 1.5 Yes 0 0 No -22 0.89 Yes 48 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67810924 + NM_006019 TCIRG1 1 1.59 0.78 42 5.13 83.83 9 6 Yes -4 0.2 No 0 0 No -29 0.43 No 41 79.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 67810930 + NM_006019 TCIRG1 1 0.58 0.24 15 0.05 0 15 3.87 No 2 -0.25 No 0 0 No -14 0.61 No 56 42.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 67811020 + NM_006019 TCIRG1 1 0.94 1.22 49 -12.71 0 9 3.87 No 41 -2.78 No 19 0.85 Yes -13 0.42 No 57 49.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 67811088 + NM_006019 TCIRG1 1 1.3 1.69 52 1.56 63.41 31 7.07 Yes 18 1.34 Yes 0 0 No -30 0.75 Yes 40 70 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67811238 + NM_006019 TCIRG1 1 0.12 0.17 12 -8.44 0 13 4.12 No 29 1.37 Yes 29 0.69 Yes -18 0.41 No 13 27.82 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 67811264 + NM_006019 TCIRG1 1 8.1 11.24 68 7.47 72.81 20 5.46 No 55 1.38 Yes 22 0.96 Yes -28 0.72 Yes 42 74.59 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 67811311 + NM_006019 TCIRG1 1 3.95 5.65 71 9.33 84.82 27 4.63 No 41 1.64 Yes 0 0 No -22 0.71 Yes 50 63.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 67813045 + NM_006019 TCIRG1 1 0.09 0.14 9 2.78 0 29 5.66 Yes 74 -1.56 No 0 0 No -27 0.73 Yes 43 93.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 67815133 + NM_006019 TCIRG1 1 0.15 0.25 17 1.51 0 21 4.06 No 29 1.41 Yes 0 0 No -41 0.84 Yes 29 70.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67816296 + NM_006019 TCIRG1 1 0.13 0.32 19 2.52 74.76 26 6 Yes 56 -4.7 No 0 0 No -25 0.87 Yes 45 81.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 67816730 + NM_006019 TCIRG1 1 0.08 0.18 11 11.31 85.47 36 5.52 No 23 1.11 Yes 0 0 No -26 0.86 Yes 44 81.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67817084 + NM_006019 TCIRG1 1 3.19 3.33 68 7.61 0 19 4.51 No 6 1.06 Yes 0 0 No -18 0.88 Yes 52 76.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67818220 + NM_006019 TCIRG1 1 0.27 0.51 26 0.54 67.75 22 4.69 No 28 1.9 Yes 0 0 No -40 0.73 Yes 30 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 96176887 - NM_001098725 TCL1A 1 0.55 1.44 49 10.13 85.09 32 6.16 Yes 28 0.89 Yes 31 0.82 Yes -31 0.95 Yes 39 96.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 96176887 - NM_001098725 TCL1A 1 0.09 0.22 11 10.13 85.09 32 6.16 Yes 28 0.89 Yes 31 0.82 Yes -31 0.95 Yes 39 96.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 96178223 - NM_001098725 TCL1A 1 0.07 0.36 15 7.63 85.16 30 7.2 Yes 17 1.06 Yes 0 0 No -29 0.97 Yes 41 97.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 96179112 - NM_001098725 TCL1A 1 1.37 3.44 67 11.34 87.71 52 7.62 Yes 56 1 Yes 28 0.04 Yes -48 0.49 No 22 70.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 31006866 + NM_000355 TCN2 1 0.71 0.44 17 -3.95 0 12 4.24 No 26 1.6 Yes 0 0 No -33 0.66 No 37 84.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 31008871 + NM_000355 TCN2 1 1.27 0.67 32 4.21 0 15 4.58 No 16 1.29 Yes 28 0.94 Yes -40 0.48 No 30 70.36 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 31013289 + NM_000355 TCN2 1 0.27 0.14 9 6.35 78.77 27 5.39 No 14 0.43 No 34 0.86 Yes -26 0.41 No 44 56.26 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 149747251 + NM_001135243 TCOF1 1 0.23 0.44 23 4.23 76.6 55 6.46 Yes 42 0.77 No 0 0 No -54 0.7 Yes 16 84.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 149753763 + NM_001135243 TCOF1 1 0.42 0.4 25 5.75 72.71 25 4.23 No 20 -1.51 No 0 0 No -24 0.64 No 47 32.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 149762624 + NM_001135243 TCOF1 1 6.51 6.54 71 6.96 88.44 22 4.9 No 40 0.77 Yes 21 0.95 Yes -21 0.96 Yes 49 96.98 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 149762627 + NM_001135243 TCOF1 1 0.59 0.68 34 1.28 77.04 25 5.2 No 43 0.77 No 21 0.95 Yes -24 0.97 Yes 46 90.99 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 149763300 + NM_001135243 TCOF1 1 7.15 7.78 72 12.17 90.37 58 7.63 Yes 53 -1.08 No 26 0.52 Yes -26 0.77 Yes 49 75.58 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 149767505 + NM_001135243 TCOF1 1 2.28 2.25 65 4.01 63.14 39 5.91 Yes 11 1.18 Yes 23 0.77 Yes -34 0.52 No 36 62.93 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 149772267 + NM_001135243 TCOF1 1 280.74 81.01 72 3.75 85.71 23 5.19 No 56 0.7 No 23 0.88 Yes -23 0.57 No 48 61.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 149772947 + NM_001135243 TCOF1 1 0.19 0.25 15 9.62 91.34 16 4.69 No 3 0.31 No 0 0 No -19 0.44 No 40 69.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 149772985 + NM_001135243 TCOF1 1 1.11 1.39 56 0.06 0 19 4.47 No 6 0.82 Yes 0 0 No -18 0.88 Yes 52 82.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 149778587 + NM_001135243 TCOF1 1 0.46 0.63 31 -1.66 70.64 32 6 Yes 19 0.77 Yes 0 0 No -31 0.89 Yes 39 77.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 160200848 - NM_001008897 TCP1 1 0.23 2.61 63 4.69 75.12 26 6.64 Yes 55 0.13 No 23 0.86 Yes -25 0.91 Yes 45 85.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 160202141 - NM_001008897 TCP1 1 0.03 0.47 23 -6.6 65.86 29 5.51 No 75 0.07 No 0 0 No -28 0.76 Yes 42 79.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 160205879 - NM_001008897 TCP1 1 0.02 0.22 14 -17.23 0 65 6.98 Yes 45 0.83 Yes 0 0 No -24 0.3 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 160207029 - NM_001008897 TCP1 1 0.01 0.15 10 -5.54 0 18 4.84 No 5 0.65 No 0 0 No -26 0.95 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 33066607 + NM_001145541 TCP11L1 1 0.82 0.49 24 5.11 76.56 28 7.71 Yes 15 1.19 Yes 0 0 No -27 0.79 Yes 43 82.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 33076142 + NM_001145541 TCP11L1 1 2.43 1.4 53 -0.57 0 25 4.54 No 6 0.42 No 0 0 No -24 0.94 Yes 46 97.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 33078133 + NM_001145541 TCP11L1 1 0.58 0.31 17 1.73 0 30 5.94 Yes 29 1.27 Yes 29 0.86 Yes -29 0.87 Yes 41 68.45 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 33083060 + NM_001145541 TCP11L1 1 1.43 1.03 47 1.42 70.27 17 4.59 No -2 0.16 No 25 0.44 Yes -44 0.38 No 26 32.04 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 33089871 + NM_001145541 TCP11L1 1 0.28 0.17 11 11.19 85.2 31 5.81 Yes 18 0.31 No 0 0 No -30 0.73 Yes 40 49.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 49450365 + NM_022171 TCTA 1 0.71 0.49 29 1.6 56.25 28 5.8 Yes 6 0.37 No 18 0.83 Yes -18 0.65 No 52 68.64 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 49450373 + NM_022171 TCTA 1 0.43 0.26 17 -0.55 0 14 4.08 No 14 1.11 Yes 18 0.83 Yes -26 0.86 Yes 44 57.64 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 196018241 - NM_152773 TCTEX1D2 1 0.34 0.14 7 1.6 0 45 7.62 Yes 50 1.1 Yes 0 0 No -44 0.85 Yes 26 94.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196028121 - NM_152773 TCTEX1D2 1 0.28 0.15 9 8.79 94.44 18 5.38 No 5 0.1 No 0 0 No -22 0.35 No 48 53.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 196028975 - NM_152773 TCTEX1D2 1 1.24 0.6 29 9.69 94.82 22 5.6 Yes 40 1.47 Yes 0 0 No -26 0.88 Yes 44 76.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196032645 - NM_152773 TCTEX1D2 1 0.45 0.18 11 5.8 88.45 23 5.17 No 58 1.23 Yes 25 0.84 Yes -22 0.49 No 48 68.5 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 196032663 - NM_152773 TCTEX1D2 1 1.07 0.49 23 5.22 86.07 53 8.8 Yes 40 1.23 Yes 25 0.84 Yes -31 0.82 Yes 39 78.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 111065734 + NM_001319682 TCTN1 1 0.96 0.28 12 4.97 70.08 38 6.48 Yes 69 0.29 No 33 0.18 Yes -37 0.88 Yes 33 92.65 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 111065856 + NM_001319682 TCTN1 1 1 0.31 19 9.11 85.67 33 6.24 Yes 63 1.02 Yes 32 0.47 Yes -23 0.55 No 39 79.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 111066601 + NM_001319682 TCTN1 1 5.29 1.54 51 4.59 86.82 28 6.03 Yes 27 -2.4 No 27 0.59 Yes -26 0.32 No 50 61.78 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 124161476 + NM_001143850 TCTN2 1 1.89 0.22 13 3.65 77.35 53 5.49 No 53 0.51 No 0 0 No -23 0.96 Yes 47 94.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124184583 + NM_001143850 TCTN2 1 1.41 0.18 12 3.67 0 38 8.75 Yes 25 1.71 Yes 28 0.79 Yes -43 0.66 No 27 77.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 124192313 + NM_001143850 TCTN2 1 5.57 0.39 22 5.72 90.92 28 5.29 No 24 -0.89 No 0 0 No -27 0.56 No 43 61.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 97428915 - NM_015631 TCTN3 1 0.38 0.51 26 10.25 90.59 18 5.38 No 5 1.36 Yes 0 0 No -32 0.67 Yes 38 70.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97438263 - NM_015631 TCTN3 1 0.34 0.53 27 6.62 87.13 16 5.14 No 3 0.91 Yes 0 0 No -27 0.6 No 18 48.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 97438284 - NM_015631 TCTN3 1 0.87 1.26 47 3.28 0 32 7.14 Yes 70 0.8 Yes 0 0 No -31 0.67 Yes 39 75.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97438288 - NM_015631 TCTN3 1 0.17 0.22 12 2.3 84.41 28 6.86 Yes 66 0.8 Yes 0 0 No -27 0.65 No 43 74.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 97440333 - NM_015631 TCTN3 1 0.85 0.78 35 7.85 79.92 29 6.56 Yes 16 0.34 No 0 0 No -29 0.72 Yes 41 76.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97440389 - NM_015631 TCTN3 1 0.19 0.19 14 0.17 66.32 22 4.21 No 66 -5.36 No 28 0.73 Yes -31 0.39 No 60 27.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 97442597 - NM_015631 TCTN3 1 0.06 0.13 9 -0.73 73.26 24 5.1 No 73 0.23 No 24 0.75 Yes -23 0.89 Yes 47 93.26 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 97442938 - NM_015631 TCTN3 1 3.34 5.04 71 5.42 84.86 83 9.82 Yes 0 1.21 Yes 0 0 No -36 0.61 No 40 67.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 97442950 - NM_015631 TCTN3 1 2.31 3.53 70 -4.61 0 71 9.19 Yes 12 0.9 Yes 0 0 No -24 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 97442974 - NM_015631 TCTN3 1 0.2 0.31 21 -0.71 0 47 7.8 Yes 62 -2.15 No 21 0.79 Yes -31 0.77 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 97445388 - NM_015631 TCTN3 1 0.37 0.61 31 2.24 0 9 3.87 No 16 0.56 No 0 0 No -28 0.77 Yes 42 86.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97447457 - NM_015631 TCTN3 1 0.28 0.5 26 3.65 79.67 13 4.37 No 37 1.25 Yes 0 0 No -19 0.44 No 48 41.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 104361631 + NM_003211 TDG 1 0.32 0.32 16 3.01 0 43 6.63 Yes 30 0.28 No 37 0.3 Yes -37 0.8 Yes 33 72.38 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 104374255 + NM_003211 TDG 1 0.59 0.86 35 3.7 88.62 25 5 No 12 1 Yes 0 0 No -24 0.92 Yes 46 95.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 104375033 + NM_003211 TDG 1 0.08 0.13 8 4.74 84.41 44 6.78 Yes 31 1.49 Yes 0 0 No -31 0.67 Yes 39 86.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 104376597 + NM_003211 TDG 1 0.22 0.35 21 5 92.29 26 5 No 29 0.89 Yes 25 0.89 Yes -23 0.58 No 47 59.05 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 104377091 + NM_003211 TDG 1 0.19 0.24 13 0.94 67.15 27 3.96 No 47 0.64 No 0 0 No -26 0.92 Yes 44 96.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 104378552 + NM_003211 TDG 1 0.07 0.18 11 4.4 73.5 34 5.91 Yes 21 0.77 No 0 0 No -28 0.7 Yes 42 82.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 90422921 + NM_001008744 TDP1 1 66.6 13.39 72 7.98 83.4 32 6.85 Yes 19 1.64 Yes 18 0.89 Yes -31 0.93 Yes 39 96.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 90429568 + NM_001008744 TDP1 1 1.41 0.32 16 9.07 90.7 28 4.05 No 43 -1.59 No 23 0.5 Yes -23 0.53 No 47 65.81 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 90432529 + NM_001008744 TDP1 1 0.67 0.53 25 6.7 88.8 24 4.25 No 29 0.68 No 0 0 No -32 0.54 No 38 74.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 90437522 + NM_001008744 TDP1 1 0.34 0.32 20 -3.45 0 20 7.47 Yes 7 1.85 Yes 0 0 No -26 0.65 No 44 58.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 90447806 + NM_001008744 TDP1 1 0.33 0.36 20 6.16 82.01 24 7.29 Yes 11 1.97 Yes 23 0.96 Yes -23 0.64 No 47 84.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 90449457 + NM_001008744 TDP1 1 0.94 1.01 47 9.19 91.58 23 5.72 Yes 64 0.67 No 30 0.74 Yes -30 0.61 No 48 68.41 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 90452062 + NM_001008744 TDP1 1 0.17 0.17 11 13.13 87.24 24 5.37 No 69 0.64 No 0 0 No -23 0.71 Yes 47 78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 90482405 + NM_001008744 TDP1 1 1.15 1.04 43 4.93 84.41 37 6 Yes 24 0.21 No 0 0 No -29 0.7 Yes 41 83.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 90487160 + NM_001008744 TDP1 1 1.22 1 42 8.3 88.27 25 5.2 No 12 1.84 Yes 0 0 No -24 0.89 Yes 46 97.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 90489375 + NM_001008744 TDP1 1 0.51 0.42 23 10.88 91.61 41 6.47 Yes 28 1.27 Yes 29 0.52 Yes -25 0.35 No 41 59.12 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 24651143 - NM_016614 TDP2 1 0.14 0.24 13 6.71 79.49 42 7.02 Yes 29 1.31 Yes 0 0 No -29 0.46 No 42 47.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 24651318 - NM_016614 TDP2 1 0.08 0.15 9 -8.2 76.19 23 5.02 No 54 0.97 Yes 24 0.93 Yes -23 0.44 No 12 25.31 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 24653702 - NM_016614 TDP2 1 0.49 0.99 42 5.1 80.34 19 5.83 Yes 6 0.7 No 0 0 No -18 0.56 No 52 69.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 24658126 - NM_016614 TDP2 1 0.08 0.19 14 -0.46 0 12 3.87 No 8 0.98 Yes 0 0 No -28 0.65 No 42 74.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 24658973 - NM_016614 TDP2 1 0.08 0.19 13 -3.38 0 14 3.77 No 55 -2.63 No 29 0.51 Yes -19 0.71 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 24665426 - NM_016614 TDP2 1 0.39 0.9 42 7.16 95.16 25 6 Yes 67 1.04 Yes 0 0 No -24 0.93 Yes 46 87.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 61042484 + NM_030794 TDRD3 1 1.52 0.69 34 5.25 70.26 33 8.03 Yes 20 0.92 Yes 0 0 No -32 0.85 Yes 38 80.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 61058426 + NM_030794 TDRD3 1 0.2 0.1 7 5.84 85.45 32 5.58 Yes 19 1.71 Yes 0 0 No -31 0.9 Yes 39 95.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 61058826 + NM_030794 TDRD3 1 1.27 0.51 22 -8.94 80.15 26 6.09 Yes 13 1.01 Yes 25 0.62 Yes -26 0.56 No 44 50.99 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 61059935 + NM_030794 TDRD3 1 1.64 0.82 36 0.68 75.17 28 5.59 Yes 15 1.18 Yes 0 0 No -27 0.56 No 47 55.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 61064210 + NM_030794 TDRD3 1 0.63 0.19 10 10.78 93.82 29 5.92 Yes 25 0.8 Yes 0 0 No -28 0.69 Yes 42 83.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 61101495 + NM_030794 TDRD3 1 0.57 0.33 15 5.23 90.61 19 4.74 No 6 0.39 No 0 0 No -21 0.69 Yes 49 84.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 61121377 + NM_030794 TDRD3 1 1.49 0.5 23 2.97 77.17 37 6.92 Yes 15 1.28 Yes 0 0 No -27 0.77 Yes 31 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 61147746 + NM_030794 TDRD3 1 0.72 0.1 7 5.1 81.26 42 6.1 Yes 29 0.31 No 23 0.72 Yes -29 0.63 No 41 63.93 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 61147746 + NM_030794 TDRD3 1 190.23 26.13 72 5.1 81.26 42 6.1 Yes 29 0.31 No 23 0.72 Yes -29 0.63 No 41 63.93 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 100197671 + NM_001302884 TDRD7 1 0.19 0.18 10 4.68 77.15 25 6.51 Yes 69 -4.17 No 0 0 No -24 0.97 Yes 46 96.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 100234703 + NM_001302884 TDRD7 1 0.63 0.33 15 3.88 74.73 34 6.58 Yes 21 1.6 Yes 0 0 No -33 0.81 Yes 37 92.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151751684 - NM_001083963 TDRKH 1 0.99 0.11 8 2.03 77.96 19 5.39 No 30 -1.99 No 23 0.43 Yes -21 0.44 No 49 46.64 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 48151703 - NM_003215 TEC 1 3.96 3.14 67 -1.49 0 29 7.79 Yes 16 1.88 Yes 23 0.94 Yes -28 0.92 Yes 42 94.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 48151706 - NM_003215 TEC 1 2.33 1.81 58 -1.51 83.29 26 7.6 Yes 13 1.88 Yes 23 0.94 Yes -25 0.92 Yes 45 95.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 48154428 - NM_003215 TEC 1 0.73 0.4 22 9.82 92 25 4.95 No 12 0.38 No 0 0 No -27 0.92 Yes 43 91.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 48169065 - NM_003215 TEC 1 0.45 0.28 16 9.03 87.57 37 5.23 No 21 0.09 No 0 0 No -36 0.53 No 40 42.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 48169966 - NM_003215 TEC 1 0.53 0.43 23 1.17 0 35 6.85 Yes 22 0.7 No 0 0 No -34 0.71 Yes 36 90.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 48172340 - NM_003215 TEC 1 0.47 0.33 20 6.02 73.55 37 6.82 Yes 66 -5.75 No 0 0 No -24 0.55 No 39 37.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 48191098 - NM_003215 TEC 1 0.58 0.22 12 9.34 85.32 22 6.51 Yes 26 1.56 Yes 0 0 No -21 0.34 No 49 52.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 48200218 - NM_003215 TEC 1 1.2 0.53 24 8.64 87.07 19 5.49 No 58 2.1 Yes 0 0 No -18 0.75 Yes 52 85.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48200276 - NM_003215 TEC 1 2.07 0.85 36 4.6 73.5 13 5.13 No 0 2.13 Yes 0 0 No -32 0.42 No 34 61.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 48200310 - NM_003215 TEC 1 3.68 1.53 50 6.8 85.3 36 8.36 Yes 23 1 Yes 0 0 No -35 0.55 No 35 76.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 48209632 - NM_003215 TEC 1 0.24 0.11 8 10.07 88.27 26 7.55 Yes 13 1.53 Yes 0 0 No -25 0.94 Yes 45 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 48221677 - NM_003215 TEC 1 0.69 0.32 20 10.08 84.6 28 5.2 No 66 -3.9 No 0 0 No -25 0.79 Yes 45 71.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 48254779 - NM_003215 TEC 1 1.37 0.43 22 7.98 84.98 28 5.38 No 15 0.45 No 0 0 No -27 0.9 Yes 43 89.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 48266514 - NM_003215 TEC 1 2.72 0.85 34 10.05 89.89 30 5.57 Yes 17 0.47 No 0 0 No -29 0.83 Yes 41 92.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 97856082 - NM_015395 TECPR1 1 0.83 0.14 8 4.47 85.02 30 5.8 Yes 52 -1.78 No 24 0.5 Yes -24 0.31 No 46 49.19 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 97857127 - NM_015395 TECPR1 1 0.68 0.11 7 9.66 99.43 34 5.66 Yes 57 1.84 Yes 0 0 No -33 0.58 No 37 57.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 97858028 - NM_015395 TECPR1 1 1.63 0.35 21 8.57 78.2 27 6.71 Yes 14 1.04 Yes 26 0.65 Yes -26 0.76 Yes 44 84.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 97861338 - NM_015395 TECPR1 1 2.46 0.29 18 5.42 71.62 36 5.98 Yes 49 0.58 No 0 0 No -30 0.7 Yes 40 74.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 97868860 - NM_015395 TECPR1 1 0.6 0.15 11 0.2 0 48 8.86 Yes 63 0.5 No 0 0 No -37 0.55 No 33 73.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 97869667 - NM_015395 TECPR1 1 0.82 0.19 13 5.53 86.07 45 7.13 Yes 32 0.25 No 0 0 No -19 0.48 No 50 44.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 102845006 + NM_014844 TECPR2 1 0.53 0.13 8 5.15 90.14 28 4.94 No 3 0.79 Yes 0 0 No -27 0.54 No 43 56.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 102869342 + NM_014844 TECPR2 1 0.45 0.13 9 8.59 83.94 32 6.71 Yes 19 1.7 Yes 0 0 No -31 0.9 Yes 39 96.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102891271 + NM_014844 TECPR2 1 0.39 0.13 7 2.92 76.11 24 5.89 Yes 11 0.33 No 0 0 No -23 0.62 No 47 65.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 102891347 + NM_014844 TECPR2 1 2.32 0.75 37 7.33 92.49 40 5.11 No 70 0.77 No 31 0.2 Yes -39 0.42 No 39 34.41 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 102905384 + NM_014844 TECPR2 1 0.98 0.21 11 8.24 83.82 21 5.66 Yes 8 1.18 Yes 0 0 No -20 0.85 Yes 50 89.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102930906 + NM_014844 TECPR2 1 0.5 0.13 8 7.42 80.84 20 7.14 Yes 7 1.02 Yes 0 0 No -19 0.55 No 51 64.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 102937803 + NM_014844 TECPR2 1 0.47 0.11 7 2.78 75.99 25 5.78 Yes 63 1.38 Yes 0 0 No -24 0.96 Yes 46 96.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102963298 + NM_014844 TECPR2 1 0.51 0.14 8 5.87 71.35 26 7.05 Yes 55 1.74 Yes 21 0.77 Yes -25 0.51 No 45 64.22 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 102963805 + NM_014844 TECPR2 1 5.56 1 42 9.83 86.73 22 5.97 Yes 9 0.02 No 0 0 No -21 0.89 Yes 49 67.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 14673952 + NM_001321170 TECR 1 0.55 1.14 45 5.32 73.31 26 5.09 No 68 1.13 Yes 25 0.61 Yes -25 0.34 No 45 47.76 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 14673985 + NM_001321170 TECR 1 8.5 18.11 72 8.21 79.49 19 5 No 23 -0.88 No 24 0.73 Yes -18 0.68 Yes 52 78.32 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 14674582 + NM_001321170 TECR 1 0.25 0.39 23 -11.66 0 13 2.99 No 53 -0.09 No 21 0.66 Yes -60 0.39 No 18 23.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 14674646 + NM_001321170 TECR 1 0.51 0.79 34 -1.59 0 22 4.48 No 46 0.97 Yes 21 0.85 Yes -21 0.87 Yes 49 63.23 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 14675030 + NM_001321170 TECR 1 0.17 0.39 22 0.19 67.38 43 4.91 No 45 1.05 Yes 26 0.67 Yes -27 0.81 Yes 43 54.97 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 29226469 - NM_024683 TEFM 1 0.9 0.47 20 3.28 80.62 19 5.16 No 67 0.93 Yes 0 0 No -22 0.79 Yes 48 83.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 29226567 - NM_024683 TEFM 1 1.31 0.69 32 2.3 67.39 31 5.74 Yes 18 0.69 No 0 0 No -30 0.82 Yes 40 79.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 29227540 - NM_024683 TEFM 1 4.24 2.39 61 2.04 74.42 35 6.21 Yes 52 0.8 Yes 26 0.5 Yes -29 0.64 No 41 68.38 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 29227577 - NM_024683 TEFM 1 0.56 0.18 11 0.78 0 24 5.05 No 15 0.81 Yes 26 0.5 Yes -23 0.49 No 43 63.12 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 29227594 - NM_024683 TEFM 1 0.34 0.19 12 3.12 70.59 28 6.7 Yes 15 0.66 No 23 0.72 Yes -27 0.78 Yes 43 65.55 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 29230148 - NM_024683 TEFM 1 0.46 0.21 13 3.01 0 40 6.46 Yes 27 1.09 Yes 0 0 No -39 0.52 No 31 58.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 29231377 - NM_024683 TEFM 1 0.22 0.14 9 6.08 89 19 4.69 No 6 0.33 No 0 0 No -18 0.81 Yes 52 67.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 1543978 + NM_016111 TELO2 1 0.29 0.13 9 7.97 79.39 19 5.65 Yes 25 1.68 Yes 0 0 No -25 0.66 No 46 68.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 1544281 + NM_016111 TELO2 1 15.12 6.38 70 7.98 88.06 22 4.69 No 9 1.21 Yes 21 0.91 Yes -21 0.82 Yes 49 90.32 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 1546160 + NM_016111 TELO2 1 0.28 0.14 9 1.35 0 9 3.87 No 22 1.98 Yes 0 0 No -34 0.81 Yes 36 90.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 1551680 + NM_016111 TELO2 1 0.28 0.21 14 3.76 83.11 21 4.87 No 34 1.12 Yes 25 0.54 Yes -21 0.82 Yes 49 79.09 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 1551680 + NM_016111 TELO2 1 2.3 1.56 54 3.76 83.11 21 4.87 No 34 1.12 Yes 25 0.54 Yes -21 0.82 Yes 49 79.09 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 1556225 + NM_016111 TELO2 1 1.1 0.75 39 4.52 68.73 27 4.67 No -2 0.26 No 27 0.54 Yes -30 0.48 No 51 53.65 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 1556484 + NM_016111 TELO2 1 10.8 4.43 66 2.7 76.55 20 5.1 No -3 -1.6 No 20 0.53 Yes -51 0.49 No 51 60.12 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 1559256 + NM_016111 TELO2 1 0.66 0.51 25 8.92 93.2 23 5.2 No 45 1.26 Yes 0 0 No -22 0.78 Yes 48 78.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73980972 + NM_001113324 TEN1 1 0.81 0.54 26 6.27 72.8 35 5.92 Yes -4 0.79 Yes 28 0.33 Yes -32 0.54 No 38 75.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 73981253 + NM_001113324 TEN1 1 3 1.67 54 2.34 0 35 6.91 Yes 54 0.54 No 0 0 No -34 0.6 No 36 56.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73989067 + NM_001113324 TEN1 1 0.44 0.19 10 3.67 0 42 7.74 Yes 29 1.82 Yes 0 0 No -35 0.96 Yes 35 96.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 20837040 - NM_007110 TEP1 1 0.28 0.14 7 6 73.7 19 5.51 No 40 1.77 Yes 24 0.75 Yes -52 0.83 Yes 18 88.06 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 20837714 - NM_007110 TEP1 1 1.68 1.01 44 8.14 87.04 16 5.39 No 31 1.46 Yes 24 0.69 Yes -24 0.5 No 46 55.85 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 20839767 - NM_007110 TEP1 1 1.22 0.51 25 4.56 79.9 32 5.68 Yes 53 0.42 No 20 0.77 Yes -20 0.87 Yes 50 87.18 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 20839767 - NM_007110 TEP1 1 1.25 0.44 25 4.56 79.9 32 5.68 Yes 53 0.42 No 20 0.77 Yes -20 0.87 Yes 50 87.18 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 20842756 - NM_007110 TEP1 1 0.91 0.36 21 6.07 78.07 25 7.13 Yes 12 2.28 Yes 0 0 No -24 0.87 Yes 46 89.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 20850206 - NM_007110 TEP1 1 0.56 0.18 11 0.43 65.8 27 4.56 No 0 0.12 No 0 0 No -19 0.42 No 51 44.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 20854449 - NM_007110 TEP1 1 0.76 0.24 12 7.24 89.16 18 5.1 No 18 1.1 Yes 0 0 No -30 0.74 Yes 40 88.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 20856212 - NM_007110 TEP1 1 0.39 0.18 11 2.95 0 19 4.44 No 22 0.9 Yes 0 0 No -18 0.83 Yes 36 73.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 20864106 - NM_007110 TEP1 1 0.88 0.54 27 2.21 75.77 28 6.45 Yes 15 1.63 Yes 0 0 No -30 0.95 Yes 40 97.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 20872809 - NM_007110 TEP1 1 0.67 0.26 14 6.16 75.31 75 10.39 Yes 62 0.85 Yes 0 0 No -25 0.52 No 45 73.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 20872915 - NM_007110 TEP1 1 0.44 0.17 12 3.08 90.72 20 5.1 No 19 1.78 Yes 0 0 No -19 0.4 No 39 52.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 20874541 - NM_007110 TEP1 1 0.44 0.11 8 3.47 82.58 27 4.33 No 26 1.1 Yes 0 0 No -26 0.52 No 44 61.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 20875883 - NM_007110 TEP1 1 0.5 0.15 10 7.84 93.93 19 5 No 63 0.72 No 0 0 No -18 0.73 Yes 52 80.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 79205294 - NM_144679 TEPSIN 1 3.44 0.78 37 5.14 77.5 35 5.83 Yes 39 -1.34 No 23 0.72 Yes -23 0.41 No 47 14.02 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 79210882 - NM_144679 TEPSIN 1 0.51 0.14 9 -3.61 69.64 27 6.15 Yes 14 1.28 Yes 18 0.79 Yes -26 0.94 Yes 44 89.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 79211960 - NM_144679 TEPSIN 1 0.84 0.13 8 7.6 74.04 30 5.83 Yes 75 -3.82 No 29 0.75 Yes -29 0.7 Yes 41 83.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 79212674 - NM_144679 TEPSIN 1 2.48 0.53 26 4 62.96 25 6.24 Yes 12 1.79 Yes 24 0.9 Yes -24 0.89 Yes 46 78.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 73925090 + NM_003218 TERF1 1 1.23 0.5 27 8.66 89.88 28 5.22 No 15 0.73 No 33 0.76 Yes -32 0.84 Yes 38 96.46 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 73939178 + NM_003218 TERF1 1 1.06 0.79 38 -0.7 0 49 8.48 Yes 36 1.21 Yes 0 0 No -49 0.53 No 22 69.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 73942570 + NM_003218 TERF1 1 30.44 17.93 72 7.5 80.88 24 5.48 No 11 0.48 No 23 0.9 Yes -23 0.84 Yes 47 90.41 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 73950940 + NM_003218 TERF1 1 0.78 0.74 35 9.67 90.51 24 4.91 No 75 1.57 Yes 23 0.78 Yes -24 0.51 No 52 52.1 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 73951779 + NM_003218 TERF1 1 0.84 0.68 30 9.8 90.57 22 5.64 Yes 9 0.39 No 0 0 No -28 0.52 No 41 69.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 69391462 - NM_005652 TERF2 1 20.82 18.49 72 7.04 83.93 32 5.38 No 2 0.84 Yes 0 0 No -26 0.69 Yes 44 61.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 69391509 - NM_005652 TERF2 1 0.78 0.67 31 7.56 82.51 54 7.46 Yes 75 0.82 Yes 0 0 No -26 0.66 No 44 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 69402499 - NM_005652 TERF2 1 1.03 1.07 46 6.4 77.46 42 6.71 Yes 29 0.69 No 41 0.74 Yes -41 0.86 Yes 29 94.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 69404470 - NM_005652 TERF2 1 0.4 0.51 27 4.49 82.58 15 5.48 No 45 -2.08 No 0 0 No -24 0.54 No 46 36.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 69404530 - NM_005652 TERF2 1 0.1 0.14 9 -0.86 65.31 51 7.16 Yes 60 1.66 Yes 0 0 No -31 0.83 Yes 39 67.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 69404648 - NM_005652 TERF2 1 2.28 2.96 70 6.75 74.41 44 8.49 Yes 31 1.51 Yes 0 0 No -43 0.86 Yes 27 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 69404729 - NM_005652 TERF2 1 0.47 0.61 33 9.4 84.32 28 5.28 No 69 0.99 Yes 0 0 No -24 0.58 No 46 58.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69413561 - NM_005652 TERF2 1 1.17 1.26 53 5.72 85.18 71 4.74 No 7 1.11 Yes 0 0 No -30 0.76 Yes 40 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 115891917 + NM_152829 TES 1 0.17 0.29 14 7.46 92.04 19 5 No 65 -3.73 No 0 0 No -18 0.43 No 48 72.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 115891960 + NM_152829 TES 1 0.12 0.25 13 1.23 82.29 21 7.11 Yes 8 0.75 No 0 0 No -20 0.92 Yes 50 91.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 117483364 - NR_031766 TESC 1 0.98 0.17 9 -0.54 0 35 8.19 Yes 22 1.9 Yes 0 0 No -34 0.84 Yes 36 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35608842 + NM_001318230 TESK1 1 0.32 0.15 11 -9.58 0 17 4.24 No 34 -2.9 No 23 0.89 Yes -16 0.66 No 57 47.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 35609103 + NM_001318230 TESK1 1 1.05 0.49 26 4.96 78.77 20 7.04 Yes 7 0.72 No 0 0 No -25 0.54 No 45 70.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45812731 - NM_007170 TESK2 1 1.41 0.25 13 -0.25 0 24 5.02 No 24 -1.96 No 0 0 No -24 0.41 No 12 26.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45824123 - NM_007170 TESK2 1 0.79 0.14 10 6 82.73 27 5.74 Yes 25 1.37 Yes 0 0 No -26 0.7 Yes 29 63.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45851042 - NM_007170 TESK2 1 0.83 0.15 10 8.11 88.84 28 5.47 No 7 0.47 No 0 0 No -25 0.75 Yes 45 75.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45864653 - NM_007170 TESK2 1 4.08 0.65 29 13.88 100 36 5.85 Yes 35 1.28 Yes 36 0.56 Yes -36 0.86 Yes 34 88.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 45940821 - NM_007170 TESK2 1 14.84 1.25 40 9.8 88.54 52 5.07 No 25 1.99 Yes 0 0 No -37 0.84 Yes 33 87.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45954277 - NM_007170 TESK2 1 10.47 0.92 43 6.99 86.03 26 5 No 13 0.62 No 0 0 No -25 0.92 Yes 45 93.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 55350592 - NM_001136030 TESPA1 1 7.47 4.14 67 -3.52 64.35 47 9.05 Yes 34 1.9 Yes 0 0 No -46 0.95 Yes 24 96.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 55355718 - NM_001136030 TESPA1 1 0.52 0.32 18 11.09 85.93 22 6 Yes 9 2.33 Yes 0 0 No -21 0.74 Yes 49 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 55357023 - NM_001136030 TESPA1 1 0.16 0.11 7 2.19 0 29 6.12 Yes 6 1.22 Yes 24 0.96 Yes -28 0.96 Yes 42 97.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 55361693 - NM_001136030 TESPA1 1 0.22 0.13 8 -3.49 69.26 16 4.92 No 44 0.21 No 21 0.47 Yes -19 0.66 No 51 50.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 55361798 - NM_001136030 TESPA1 1 1.24 0.71 35 1.06 60.01 34 6.63 Yes 21 1.58 Yes 33 0.77 Yes -33 0.84 Yes 37 90.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 55377863 - NM_001136030 TESPA1 1 1.25 0.71 34 5.25 87.86 15 6.24 Yes 2 1.33 Yes 0 0 No -36 0.61 No 34 68.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 55377951 - NM_001136030 TESPA1 1 32.73 19.53 72 9.24 90.08 29 5.29 No 67 1.35 Yes 29 0.74 Yes -29 0.83 Yes 41 90.51 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 106129769 + NM_001127208 TET2 1 0.3 0.22 14 7.06 83.14 31 5.55 No 69 0.55 No 0 0 No -30 0.47 No 40 62.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 106159670 + NM_001127208 TET2 1 1.21 0.82 42 5.66 86.44 40 4.57 No 9 1.24 Yes 0 0 No -29 0.57 No 41 71.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 106163125 + NM_001127208 TET2 1 0.42 0.33 20 8.22 81.03 40 6.63 Yes 27 0.22 No 0 0 No -39 0.89 Yes 31 89.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 106163125 + NM_001127208 TET2 1 0.9 0.75 33 8.22 81.03 40 6.63 Yes 27 0.22 No 0 0 No -39 0.89 Yes 31 89.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 106164737 + NM_001127208 TET2 1 0.27 0.19 12 0.02 0 18 4.47 No 59 1.49 Yes 0 0 No -21 0.54 No 49 69.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 106164835 + NM_001127208 TET2 1 0.25 0.19 12 2.72 65.92 29 6.09 Yes 10 0.71 No 0 0 No -28 0.74 Yes 42 72.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 106195720 + NM_001127208 TET2 1 1.27 0.72 38 11.48 84.5 28 4.23 No 74 0.48 No 0 0 No -31 0.26 No 43 35.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 74220427 + NM_001287491 TET3 1 0.41 0.22 13 6.91 82.56 29 3.83 No 59 0.53 No 0 0 No -21 0.84 Yes 49 81.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74237554 + NM_001287491 TET3 1 0.48 0.22 13 6.33 78.21 30 4.66 No 22 1.34 Yes 0 0 No -29 0.66 No 41 75.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 74239599 + NM_001287491 TET3 1 0.19 0.11 7 3.44 0 16 4.47 No 65 0.52 No 0 0 No -15 0.35 No 47 31.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 74273229 + NM_001287491 TET3 1 0.52 0.32 15 3.35 71.76 31 5.77 Yes 47 0.29 No 0 0 No -31 0.82 Yes 39 90.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74273408 + NM_001287491 TET3 1 2.23 1.21 49 5.08 0 41 7.45 Yes 28 0.87 Yes 30 0.72 Yes -40 0.93 Yes 30 96.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 74296917 + NM_001287491 TET3 1 0.71 0.38 23 7.36 87.8 32 5.78 Yes 75 -1.88 No 0 0 No -31 0.95 Yes 39 94.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 74304979 + NM_001287491 TET3 1 0.14 0.11 7 10.04 92.54 24 4.9 No 65 1.48 Yes 0 0 No -23 0.89 Yes 47 91.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74320032 + NM_001287491 TET3 1 0.19 0.14 10 -2.85 0 24 7.35 Yes 11 1.42 Yes 0 0 No -23 0.9 Yes 47 90.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74320424 + NM_001287491 TET3 1 1.96 1.04 42 7.18 80.52 42 5.92 Yes 65 2.04 Yes 0 0 No -24 0.94 Yes 46 95.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74320497 + NM_001287491 TET3 1 0.92 0.51 26 2.83 81.01 19 3.76 No 0 1.14 Yes 0 0 No -18 0.88 Yes 52 86.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 103066068 - NM_017746 TEX10 1 0.71 0.4 22 2.99 0 10 4 No 71 2.3 Yes 29 0.5 Yes -29 0.85 Yes 41 90.46 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 103072658 - NM_017746 TEX10 1 0.42 0.47 27 2.26 0 29 5.92 Yes -4 0.94 Yes 0 0 No -28 0.58 No 42 59.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 103088726 - NM_017746 TEX10 1 0.13 0.14 10 11.05 89.01 33 5.64 Yes 46 0.37 No 0 0 No -30 0.68 Yes 40 57.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 103090236 - NM_017746 TEX10 1 0.11 0.13 7 -2.34 0 12 4.24 No 26 0.41 No 0 0 No -36 0.77 Yes 34 80.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 103092474 - NM_017746 TEX10 1 0.13 0.1 7 2.82 74.03 12 5 No -1 0.93 Yes 26 0.75 Yes -16 0.36 No 54 66.98 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 103102680 - NM_017746 TEX10 1 0.16 0.21 12 11.04 87.74 22 5.83 Yes 43 0.43 No 19 0.6 Yes -21 0.77 Yes 49 71.53 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 103111652 - NM_017746 TEX10 1 4.31 1.61 52 1.8 74.9 24 6.37 Yes 7 0.72 No 20 0.39 Yes -23 0.65 No 33 36.28 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 62232322 - NM_001288733 TEX2 1 1.67 0.42 24 4.93 0 9 3.87 No 11 1.71 Yes 27 0.42 Yes -23 0.87 Yes 47 91.28 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 62265797 - NM_001288733 TEX2 1 0.54 0.14 9 6.26 66 34 5.74 Yes 21 0.75 No 33 0.55 Yes -33 0.83 Yes 37 91.79 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 71216164 - NM_144582 TEX261 1 0.06 0.13 9 5.72 79.61 34 6.62 Yes 35 0.25 No 0 0 No -33 0.62 No 37 54.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 71216313 - NM_144582 TEX261 1 0.41 0.76 33 10.18 85.82 28 5.28 No 19 0.81 Yes 0 0 No -21 0.69 Yes 43 80.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 71216586 - NM_144582 TEX261 1 0.07 0.14 7 4.78 82.05 17 5.39 No 4 0.34 No 0 0 No -22 0.83 Yes 48 87.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 51718830 + NR_103462 TEX264 1 0.23 0.28 18 8.55 82.47 17 5.37 No 47 -1.55 No 0 0 No -24 0.4 No 48 37.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 103421855 - NM_138779 TEX30 1 0.11 0.11 7 1.6 57.19 29 5.32 No 50 0.82 Yes 0 0 No -28 0.63 No 37 47.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 103422451 - NM_138779 TEX30 1 0.71 0.31 16 5.53 80.95 49 6.21 Yes 69 1.09 Yes 21 0.93 Yes -48 0.4 No 22 67.04 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 103423944 - NM_138779 TEX30 1 0.38 0.15 9 3.98 74.24 48 6.92 Yes 12 1.45 Yes 0 0 No -24 0.91 Yes 46 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 103424292 - NM_138779 TEX30 1 1.28 0.42 25 5.26 79.88 24 5.41 No 41 -3.74 No 0 0 No -23 0.9 Yes 47 90.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 56660215 + NM_001286449 TEX9 1 1.53 0.39 22 12.39 90.17 34 7.98 Yes 21 1.12 Yes 0 0 No -23 0.52 No 37 56.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56666351 + NM_001286449 TEX9 1 0.74 0.65 29 9.32 81.5 38 9.28 Yes 76 0.48 No 29 0.81 Yes -24 0.59 No 44 67.95 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 56670971 + NM_001286449 TEX9 1 0.1 0.14 8 7.4 79.44 65 10.12 Yes 52 1.82 Yes 0 0 No -40 0.86 Yes 30 93.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 56671374 + NM_001286449 TEX9 1 3.41 4.15 65 10.44 92.09 31 3.91 No 26 1.23 Yes 0 0 No -30 0.82 Yes 40 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 56676151 + NM_001286449 TEX9 1 1.94 2.36 61 -12.94 71.16 55 8.67 Yes 42 0.8 Yes 0 0 No -26 0.55 No 37 46.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56676153 + NM_001286449 TEX9 1 0.99 1.17 41 -10.75 0 57 8.78 Yes 44 0.8 Yes 0 0 No -35 0.48 No 35 56.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56711960 + NM_001286449 TEX9 1 0.11 0.24 13 9.75 89.45 25 6.73 Yes 59 0.44 No 0 0 No -24 0.61 No 46 43.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 56676541 + NM_001286449 TEX9 1 0.21 0.31 19 -1.37 59.21 22 5.14 No 55 -4.05 No 0 0 No -21 0.59 No 16 30.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 56676683 + NM_001286449 TEX9 1 0.22 0.21 13 0.05 63.1 27 5.63 Yes 38 0.87 Yes 0 0 No -30 0.22 No 44 40.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56677429 + NM_001286449 TEX9 1 6.68 9.46 70 3.65 76.87 77 8.83 Yes 16 0.42 No 0 0 No -28 0.58 No 48 57.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 56681002 + NM_001286449 TEX9 1 0.29 0.64 26 1.58 62.37 35 5.72 Yes 2 0.98 Yes 0 0 No -34 0.52 No 42 73.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 56682066 + NM_001286449 TEX9 1 0.1 0.21 13 -6.01 0 37 4.67 No 18 0.36 No 0 0 No -36 0.4 No 34 58.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 56686365 + NM_001286449 TEX9 1 0.14 0.29 17 -2.86 60.74 27 5.35 No 63 0.72 No 0 0 No -27 0.3 No 43 50.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 56687686 + NM_001286449 TEX9 1 0.2 0.31 17 4.92 77.12 52 7.14 Yes 39 0.26 No 0 0 No -31 0.7 Yes 39 70.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 56711960 + NM_001286449 TEX9 1 4.51 6.92 66 9.75 89.45 25 6.73 Yes 59 0.44 No 0 0 No -24 0.61 No 46 43.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 60145980 + NR_073073 TFAM 1 0.03 0.14 10 -13.35 0 34 7.22 Yes 21 1.58 Yes 0 0 No -33 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 60145997 + NR_073073 TFAM 1 0.25 1.01 46 -3.88 73.38 27 5.2 No 38 1.55 Yes 0 0 No -26 0.88 Yes 20 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 60148431 + NR_073073 TFAM 1 0.03 0.14 9 -16.96 0 28 5.99 Yes 15 0.75 No 0 0 No -23 0.71 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 60150527 + NR_073073 TFAM 1 0.03 0.14 9 -18.83 72.76 39 6.22 Yes 14 1.56 Yes 0 0 No -26 0.84 Yes 32 67.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 60154671 + NR_073073 TFAM 1 0.09 0.5 26 3.38 76.02 15 4.13 No 43 0.6 No 20 0.94 Yes -26 0.53 No 44 43.4 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 4308269 - NM_003223 TFAP4 1 1.46 0.76 31 -1.06 0 12 4.24 No 41 0.65 No 20 0.86 Yes -53 0.59 No 41 36.22 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 4316637 - NM_003223 TFAP4 1 0.26 0.21 12 9.09 89.96 37 5 No 7 0.2 No 0 0 No -23 0.69 Yes 47 56.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 155579043 - NM_016020 TFB1M 1 5.51 4.04 69 6.46 75.71 35 4.94 No 56 -6.05 No 24 0.62 Yes -34 0.48 No 46 54.29 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 155606410 - NM_016020 TFB1M 1 0.19 0.11 8 1.92 78.06 38 6.5 Yes 54 1.66 Yes 0 0 No -26 0.52 No 44 51.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 155619704 - NM_016020 TFB1M 1 0.54 0.35 18 4.75 83.5 23 4.67 No 21 1.44 Yes 0 0 No -23 0.43 No 48 32.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 155634379 - NM_016020 TFB1M 1 0.57 0.26 14 10.23 83.64 40 6.02 Yes 27 1.27 Yes 35 0.76 Yes -40 0.39 No 35 66.07 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 246711940 - NM_022366 TFB2M 1 0.13 0.31 11 -14.6 0 19 4.24 No 63 2.03 Yes 34 0.3 Yes -18 0.3 No 38 30.11 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 51489059 - NM_005653 TFCP2 1 19.97 14.89 72 6.08 88.08 37 5.37 No 64 0.96 Yes 33 0.83 Yes -30 0.58 No 34 80.38 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 51496902 - NM_005653 TFCP2 1 0.29 0.25 16 2.59 78.96 17 5.26 No 66 0.75 No 0 0 No -27 0.72 Yes 43 53.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 51510202 - NM_005653 TFCP2 1 0.14 0.11 7 -2.51 75.76 23 6.65 Yes 10 0.91 Yes 0 0 No -27 0.54 No 43 84.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 51511526 - NM_005653 TFCP2 1 0.21 0.24 13 1.47 0 23 4.92 No 64 0.82 Yes 0 0 No -30 0.5 No 43 53.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 51513531 - NM_005653 TFCP2 1 0.65 0.61 29 2.02 84.41 17 6.01 Yes 4 0.61 No 0 0 No -29 0.4 No 41 44.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 51518906 - NM_005653 TFCP2 1 0.33 0.31 16 6.83 81.13 22 6.3 Yes -3 0.02 No 0 0 No -37 0.41 No 49 56.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 51540240 - NM_005653 TFCP2 1 3.67 3.4 68 -2.77 0 33 7.56 Yes 5 1.08 Yes 0 0 No -32 0.79 Yes 38 83.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 51540245 - NM_005653 TFCP2 1 0.59 0.53 27 -3.66 79.4 28 7.23 Yes 0 1.1 Yes 0 0 No -27 0.84 Yes 43 82.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114239894 + NM_007111 TFDP1 1 0.31 0.36 21 8.18 88.81 33 7 Yes 20 0.7 No 32 0.84 Yes -32 0.9 Yes 38 89.7 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 114240114 + NM_007111 TFDP1 1 0.34 0.29 16 7.34 81.51 20 4.58 No 58 1.51 Yes 0 0 No -31 0.64 No 21 55.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 114240280 + NM_007111 TFDP1 1 6.51 24.28 72 4.83 89.37 21 4.69 No 57 1.01 Yes 18 0.73 Yes -18 0.85 Yes 52 89.35 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 114250543 + NM_007111 TFDP1 1 0.07 0.28 18 6.84 92.36 26 5.48 No 60 -2.67 No 0 0 No -25 0.85 Yes 45 76.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 114290306 + NM_007111 TFDP1 1 0.04 0.19 11 2.14 70.35 18 3.98 No 14 0.13 No 0 0 No -26 0.46 No 44 70.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 114290901 + NM_007111 TFDP1 1 0.03 0.19 11 0.03 58.64 49 6.76 Yes 61 1.84 Yes 0 0 No -30 0.7 Yes 40 35.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 114291313 + NM_007111 TFDP1 1 0.03 0.11 7 4.18 74.01 26 5.26 No 13 0.86 Yes 0 0 No -25 0.87 Yes 45 87.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114291934 + NM_007111 TFDP1 1 0.82 3.46 61 9.26 83.58 28 5.29 No 70 -2.64 No 22 0.83 Yes -27 0.93 Yes 43 95.21 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 114294220 + NM_007111 TFDP1 1 0.15 0.53 26 6.19 83.19 32 6.16 Yes 19 1.28 Yes 0 0 No -31 0.95 Yes 39 96.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 141663881 - NM_001178139 TFDP2 1 0.24 0.22 13 7.97 89.86 29 8.54 Yes 45 1.35 Yes 0 0 No -28 0.75 Yes 42 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 141663881 - NM_001178139 TFDP2 1 1.64 1.58 50 7.97 89.86 29 8.54 Yes 45 1.35 Yes 0 0 No -28 0.75 Yes 42 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 141693037 - NM_001178139 TFDP2 1 49.36 22.5 72 2.66 66.51 15 3.86 No 37 0.98 Yes 22 0.74 Yes -18 0.66 No 52 56.6 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 141719197 - NM_001178139 TFDP2 1 1.76 1.71 56 7.7 85.83 33 5.83 Yes 33 -1.6 No 24 0.64 Yes -24 0.45 No 38 40.02 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 141738779 - NM_001178139 TFDP2 1 0.98 0.11 7 7.61 88.49 26 6.71 Yes 13 2.08 Yes 0 0 No -25 0.91 Yes 45 95.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 141772992 - NM_001178139 TFDP2 1 18.55 2.75 70 6.35 81.25 24 4.99 No 11 0.99 Yes 23 0.87 Yes -23 0.93 Yes 47 95.34 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 141820189 - NM_001178139 TFDP2 1 0.77 0.14 8 7.38 90.51 30 6.07 Yes 34 1.13 Yes 0 0 No -29 0.96 Yes 41 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48889002 - NM_006521 TFE3 1 0.19 0.14 7 -0.81 67.03 28 5.74 Yes -1 -1.44 No 0 0 No -27 0.9 Yes 43 85.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48890697 - NM_006521 TFE3 1 0.57 0.42 26 4.8 83.28 37 6.06 Yes 24 1.13 Yes 0 0 No -32 0.56 No 38 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 48891296 - NM_006521 TFE3 1 0.23 0.24 13 -3.93 76.14 23 5.92 Yes 10 1.63 Yes 0 0 No -22 0.89 Yes 48 83.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 48894300 - NM_006521 TFE3 1 7.36 4.93 72 4.71 84.17 27 5.17 No 48 0.94 Yes 0 0 No -26 0.51 No 44 54.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 48896871 - NM_006521 TFE3 1 30.54 17.04 72 9.46 91.8 35 5 No 41 -1.66 No 23 0.82 Yes -23 0.82 Yes 47 83.28 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 48896917 - NM_006521 TFE3 1 5.35 3.06 68 6.7 82.5 29 4.25 No 42 0.33 No 0 0 No -21 0.56 No 49 67.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 41658614 - NM_001271945 TFEB 1 0.07 0.11 8 5.36 81.93 19 4.82 No NA NA NA 0 0 No -32 0.38 No 44 48.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 100448853 + NM_001007565 TFG 1 0.04 0.11 7 10.14 97.11 30 4.33 No 34 0.4 No 0 0 No -29 0.5 No 41 69.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 100450585 + NM_001007565 TFG 1 0.2 0.53 23 3.66 80.12 20 5.57 Yes 60 1.3 Yes 0 0 No -19 0.58 No 51 72.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 100460999 + NM_001007565 TFG 1 0.08 0.15 8 8.27 83.01 26 5.27 No 39 0.63 No 0 0 No -25 0.52 No 45 60.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 100463681 + NM_001007565 TFG 1 0.13 0.22 13 4.09 0 48 9.24 Yes 35 0.87 Yes 0 0 No -44 0.51 No 26 74.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 100466257 + NM_001007565 TFG 1 0.1 0.29 16 3.64 85.43 38 6.8 Yes 74 0.8 Yes 0 0 No -37 0.61 No 33 64.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 26906634 - NM_001346861 TFIP11 1 0.32 0.22 14 4 85.76 14 5.19 No 1 0.42 No 24 0.74 Yes -24 0.67 Yes 46 62.58 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 26907120 - NM_001346861 TFIP11 1 1.05 0.89 41 6.03 84.68 23 6.56 Yes 10 1.15 Yes 22 0.93 Yes -22 0.86 Yes 48 85.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 26907162 - NM_001346861 TFIP11 1 11.82 9.22 72 -0.66 67.77 53 7.86 Yes 70 -0.6 No 32 0.5 Yes -26 0.61 No 13 51.67 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 26907284 - NM_001346861 TFIP11 1 1.07 0.86 31 2.65 69.71 32 6.57 Yes 60 -2.59 No 26 0.75 Yes -31 0.66 Yes 39 77.02 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 54611515 - NM_013342 TFPT 1 1.63 1.18 45 3.76 83.21 25 5.57 Yes 51 0.95 Yes 28 0.58 Yes -28 0.39 No 51 33.5 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 54611750 - NM_013342 TFPT 1 0.31 0.22 11 7.97 82.52 29 5.92 Yes 16 1 Yes 0 0 No -28 0.74 Yes 42 79.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195780449 - NM_001313966 TFRC 1 0.01 0.14 9 0.64 66.47 14 5.17 No 39 -4.48 No 23 0.96 Yes -20 0.84 Yes 50 89.42 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 195781249 - NM_001313966 TFRC 1 0.05 0.67 31 9.68 91.39 23 5.29 No 71 1.92 Yes 0 0 No -56 0.58 No 14 40.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 195782191 - NM_001313966 TFRC 1 0.03 0.25 16 -3.45 0 16 4.12 No 55 0.58 No 22 0.6 Yes -15 0.92 Yes 55 69.63 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 195785258 - NM_001313966 TFRC 1 0.01 0.15 8 0.58 70.67 16 5.68 Yes 55 0.23 No 24 0.92 Yes -31 0.42 No 47 55.38 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 195786165 - NM_001313966 TFRC 1 0.02 0.28 17 11.79 87.75 30 5.48 No 55 0.48 No 0 0 No -29 0.67 Yes 41 61.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 195786192 - NM_001313966 TFRC 1 0.01 0.1 7 3.17 83.14 41 6.82 Yes 28 0.46 No 0 0 No -33 0.66 No 37 74.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 195788306 - NM_001313966 TFRC 1 0.04 0.49 22 4.76 86.32 22 9.11 Yes 9 0.03 No 0 0 No -25 0.4 No 45 20.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 195790233 - NM_001313966 TFRC 1 0.03 0.22 12 8.4 87.07 33 7.29 Yes 20 0.52 No 0 0 No -28 0.76 Yes 42 82.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 195794469 - NM_001313966 TFRC 1 0.01 0.17 8 4.86 71.64 42 6.93 Yes 23 0.63 No 0 0 No -35 0.74 Yes 35 81.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 195798059 - NM_001313966 TFRC 1 0.1 0.79 32 8.47 85.86 72 5.8 Yes 27 1.9 Yes 0 0 No -39 0.84 Yes 31 88.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195798059 - NM_001313966 TFRC 1 0.01 0.1 7 8.47 85.86 72 5.8 Yes 27 1.9 Yes 0 0 No -39 0.84 Yes 31 88.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195799904 - NM_001313966 TFRC 1 24.03 1.28 49 12.15 95.65 40 8.43 Yes 27 1.29 Yes 0 0 No -39 0.91 Yes 31 93.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195800997 - NM_001313966 TFRC 1 215.71 11.25 72 8.9 89.05 30 5.46 No 17 0.11 No 24 0.84 Yes -24 0.85 Yes 46 91.18 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 195802231 - NM_001313966 TFRC 1 3.55 0.19 12 -16.84 0 63 6.31 Yes 35 1.22 Yes 0 0 No -25 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 195802232 - NM_001313966 TFRC 1 19410.97 922.89 72 4.64 77.43 62 6.27 Yes 34 1.23 Yes 24 0.88 Yes -24 0.93 Yes 46 89.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 195802232 - NM_001313966 TFRC 1 25.52 1.04 42 4.64 77.43 62 6.27 Yes 34 1.23 Yes 24 0.88 Yes -24 0.93 Yes 46 89.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 195803977 - NM_001313966 TFRC 1 0.44 2.89 55 5.62 80.6 26 5.1 No 26 0.99 Yes 0 0 No -25 0.91 Yes 45 93.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195804596 - NM_001313966 TFRC 1 0.02 0.13 9 9.59 95.99 28 5.29 No 32 0.7 No 0 0 No -27 0.76 Yes 43 55.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 195808112 - NM_001313966 TFRC 1 0.03 0.18 9 -3.16 73.52 23 4.25 No 43 -3.15 No 0 0 No -22 0.95 Yes 48 73.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 195808160 - NM_001313966 TFRC 1 0.05 0.29 17 2.53 0 106 7.56 Yes 68 1.06 Yes 0 0 No -40 0.56 No 22 51.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 95230339 - NM_001304430 TGDS 1 0.37 0.35 19 4.91 69.84 17 5.74 Yes 24 0.98 Yes 0 0 No -29 0.53 No 41 61.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 95230998 - NM_001304430 TGDS 1 0.18 0.19 11 6.57 88.36 28 5.37 No 43 0.12 No 0 0 No -27 0.41 No 43 79.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 95232201 - NM_001304430 TGDS 1 0.32 0.33 21 2.3 0 11 3.21 No 15 0.67 No 0 0 No -28 0.62 No 42 58.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 95233888 - NM_001304430 TGDS 1 2.74 2.51 64 8.24 83.07 33 6.56 Yes 57 1.71 Yes 0 0 No -32 0.87 Yes 38 93.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 95243226 - NM_001304430 TGDS 1 0.2 0.17 8 2.39 66.93 22 3.89 No 61 -5.26 No 20 0.44 Yes -25 0.36 No 46 45.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 41847939 - NM_000660 TGFB1 1 3.73 25.72 72 -0.62 66.33 46 6.21 Yes 3 0.94 Yes 18 0.69 Yes -45 0.82 Yes 25 87.22 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 41848205 - NM_000660 TGFB1 1 0.07 0.39 21 12.61 93.75 21 4.45 No 64 -2.36 No 0 0 No -20 0.57 No 41 60.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 41854301 - NM_000660 TGFB1 1 0.31 1.76 50 2.6 74.33 11 5.75 Yes 76 2 Yes 0 0 No -25 0.48 No 38 59.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 101894790 + NM_001306210 TGFBR1 1 1102.27 61.89 72 0.49 0 20 4.58 No 18 1.27 Yes 37 0.19 Yes -19 0.79 Yes 51 80.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 101907778 + NM_001306210 TGFBR1 1 0.61 0.46 23 6.49 77.54 34 7.5 Yes 21 1.61 Yes 0 0 No -34 0.5 No 37 67.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 105884167 - NR_137328 TGFBRAP1 1 0.17 0.18 13 5.4 76 26 5.08 No 37 1.4 Yes 0 0 No -25 0.7 Yes 45 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 105884329 - NR_137328 TGFBRAP1 1 0.86 0.88 36 7.6 87.74 22 5.83 Yes 65 -5.12 No 0 0 No -21 0.58 No 49 61.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 105897200 - NR_137328 TGFBRAP1 1 2.77 3.81 69 7.85 80.62 34 7.68 Yes 67 -0.01 No 25 0.88 Yes -27 0.56 No 37 63.23 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 105924773 - NR_137328 TGFBRAP1 1 96.48 9.17 72 10.27 88.76 31 5.65 Yes 18 1.19 Yes 0 0 No -30 0.72 Yes 40 68.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 105944858 - NR_137328 TGFBRAP1 1 13.41 1.26 54 7.92 84.73 38 6.63 Yes 25 0.9 Yes 0 0 No -37 0.82 Yes 33 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 35219907 + NM_001199515 TGIF2 1 0.86 1.26 48 6.6 87.36 40 6.59 Yes 75 -2.72 No 24 0.12 Yes -39 0.52 No 32 67.05 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 35219958 + NM_001199515 TGIF2 1 0.42 0.58 31 4.71 87.63 35 6.57 Yes 22 -0.67 No 34 0.39 Yes -28 0.33 No 43 44.05 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 35220041 + NM_001199515 TGIF2 1 0.26 0.35 16 8.97 90.68 19 7.61 Yes 6 2.24 Yes 0 0 No -18 0.58 No 52 82.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 85545847 - NM_001206844 TGOLN2 1 0.23 0.46 21 3.28 74.19 28 5.48 No 15 1.36 Yes 0 0 No -27 0.91 Yes 43 92.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85549794 - NM_001206844 TGOLN2 1 1.72 3.38 67 9.64 86.52 30 6.28 Yes 54 1.03 Yes 0 0 No -29 0.64 No 41 72.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 85549856 - NM_001206844 TGOLN2 1 0.12 0.22 14 3.22 0 12 4.24 No 40 1.24 Yes 0 0 No -30 0.71 Yes 40 81.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85551541 - NM_001206844 TGOLN2 1 0.15 0.31 18 2.13 84.41 33 6.24 Yes 45 0.27 No 0 0 No -22 0.75 Yes 48 63.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 56698280 + NM_024831 TGS1 1 0.08 0.15 10 -8.97 64.05 21 5.42 No 68 0.24 No 0 0 No -25 0.51 No 45 76.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 56701035 + NM_024831 TGS1 1 0.07 0.13 8 4.74 84.41 37 8.44 Yes 24 1.52 Yes 0 0 No -26 0.78 Yes 44 77.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 56710730 + NM_024831 TGS1 1 0.25 0.31 20 5.53 85.73 26 5.25 No 26 1.25 Yes 0 0 No -25 0.84 Yes 45 90.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 56711476 + NM_024831 TGS1 1 0.13 0.21 11 -2.31 0 38 7.06 Yes 25 0.61 No 0 0 No -27 0.85 Yes 43 86.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 56717848 + NM_024831 TGS1 1 0.15 0.21 13 1.18 0 20 4.47 No 7 0.62 No 0 0 No -19 0.94 Yes 51 97.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 56725613 + NM_024831 TGS1 1 6.29 4.92 69 6.48 82.77 42 6.78 Yes 15 1.44 Yes 26 0.82 Yes -27 0.58 No 42 65.21 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 56725658 + NM_024831 TGS1 1 0.86 0.63 32 4.37 82 26 6.12 Yes 60 1.42 Yes 0 0 No -25 0.86 Yes 45 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 43520150 - NM_001083953 THADA 1 0.56 0.17 11 9.22 88.24 16 4.64 No 72 -2.14 No 0 0 No -24 0.67 Yes 46 54.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 43531665 - NM_001083953 THADA 1 0.42 0.14 9 0.76 0 32 5.88 Yes 19 0.86 Yes 0 0 No -31 0.75 Yes 39 75.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 43539344 - NM_001083953 THADA 1 1.71 0.53 30 11.72 93.82 26 6.61 Yes 13 1.04 Yes 0 0 No -25 0.81 Yes 45 79.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 43560403 - NM_001083953 THADA 1 4.44 1.83 61 9.99 87.63 24 6.23 Yes 11 1.73 Yes 23 0.91 Yes -23 0.81 Yes 47 94.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 43599262 - NM_001083953 THADA 1 0.24 0.11 7 3.62 59.96 20 6.4 Yes 7 1.07 Yes 19 0.52 Yes -19 0.69 Yes 51 72.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 43674135 - NM_001083953 THADA 1 1.41 0.54 26 3.09 87.8 30 5.33 No 74 0.7 No 0 0 No -25 0.93 Yes 45 93.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 43674138 - NM_001083953 THADA 1 2.02 0.71 35 4.95 81.05 27 5.07 No 71 0.7 No 0 0 No -22 0.91 Yes 48 92.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 43739981 - NM_001083953 THADA 1 0.77 0.39 26 10.05 92.02 44 6.4 Yes 31 0.13 No 0 0 No -28 0.35 No 38 61.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 43741587 - NM_001083953 THADA 1 0.69 0.35 17 4.83 77.41 26 9.51 Yes 71 -4.74 No 0 0 No -23 0.41 No 38 47.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 43765633 - NM_001083953 THADA 1 0.76 0.46 22 6.36 72.27 41 5.67 Yes 17 1.29 Yes 0 0 No -29 0.58 No 37 58.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 43765706 - NM_001083953 THADA 1 0.93 0.61 26 8.91 91.35 25 5.11 No 34 1.02 Yes 24 0.82 Yes -24 0.59 No 39 56.06 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 43768369 - NM_001083953 THADA 1 0.59 0.17 10 3.39 88.18 23 4.9 No 72 -4.19 No 0 0 No -22 0.55 No 48 56.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 43777369 - NM_001083953 THADA 1 0.56 0.46 26 5.84 83.12 35 6.33 Yes 22 0.22 No 0 0 No -31 0.41 No 39 41.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 43779062 - NM_001083953 THADA 1 4.69 3.24 66 2.05 80.78 19 6.31 Yes 6 1.85 Yes 31 0.46 Yes -29 0.43 No 41 42.19 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 43780073 - NM_001083953 THADA 1 0.68 0.28 15 8.13 86.3 24 4.41 No 38 0.41 No 0 0 No -24 0.79 Yes 46 55.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 43784732 - NM_001083953 THADA 1 0.33 0.25 13 13.43 87.28 34 4.68 No 61 0.61 No 0 0 No -34 0.72 Yes 36 50.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 43800105 - NM_001083953 THADA 1 0.14 0.11 7 9.43 82.83 18 4.54 No 40 1.12 Yes 24 0.44 Yes -21 0.4 No 49 40.91 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 43804262 - NM_001083953 THADA 1 10.82 5.86 68 8.22 92.66 14 3.34 No 23 1.28 Yes 0 0 No -26 0.85 Yes 44 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 43804401 - NM_001083953 THADA 1 0.68 0.35 19 2.66 73.02 20 4.86 No 8 -1.5 No 21 0.66 Yes -19 0.47 No 51 56.19 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 43814105 - NM_001083953 THADA 1 0.29 0.28 16 2.68 84.31 31 4.15 No 5 1.25 Yes 0 0 No -30 0.85 Yes 40 60.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 43819571 - NM_001083953 THADA 1 2.34 0.14 9 2.55 72.76 33 5.12 No -1 0.46 No 28 0.61 Yes -26 0.54 No 53 43.16 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 43820030 - NM_001083953 THADA 1 18.57 1.18 49 10.56 93.33 28 6.39 Yes 59 0.78 Yes 27 0.47 Yes -27 0.77 Yes 43 59.94 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 42693476 - NM_018105 THAP1 1 0.18 0.14 10 -3.23 0 36 7.04 Yes 23 0.49 No 0 0 No -35 0.41 No 44 34.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 76074020 - NR_130898 THAP12 1 0.48 0.11 8 6.53 86.16 20 7.14 Yes 7 1.62 Yes 0 0 No -19 0.72 Yes 51 86.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 76074020 - NR_130898 THAP12 1 2.03 0.4 19 6.53 86.16 20 7.14 Yes 7 1.62 Yes 0 0 No -19 0.72 Yes 51 86.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 76075765 - NR_130898 THAP12 1 2.67 0.44 22 4.83 85.46 45 6.97 Yes 32 0.35 No 0 0 No -26 0.85 Yes 44 83.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 72058648 + NM_031435 THAP2 1 10.5 2.51 65 6.73 80.93 29 5.65 Yes 16 0.95 Yes 28 0.82 Yes -28 0.73 Yes 42 61.22 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 6689702 + NM_001195753 THAP3 1 2.16 0.81 40 7.17 75.11 29 9 Yes 62 1.19 Yes 28 0.93 Yes -28 0.93 Yes 42 97.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 6690350 + NM_001195753 THAP3 1 13.99 5.24 71 7.49 87.97 48 5.34 No 35 0.2 No 26 0.74 Yes -29 0.85 Yes 41 83.91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 6692429 + NM_001195753 THAP3 1 0.68 0.21 15 -3.16 0 23 4.67 No NA NA NA 21 0.43 Yes -21 0.51 No 49 21.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 6692973 + NM_001195753 THAP3 1 5.82 2.03 59 7.75 75.52 28 5.17 No 15 0.54 No 0 0 No -27 0.85 Yes 43 86.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 242552395 - NM_015963 THAP4 1 0.22 0.13 7 6.86 85.24 46 7.13 Yes 33 0.53 No 0 0 No -31 0.45 No 39 61.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 108206467 - NM_001287601 THAP5 1 371.84 54.9 72 9.62 89.95 40 6.71 Yes 38 0.01 No 40 0.13 Yes -40 0.67 Yes 30 83.32 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 76452639 + NM_144721 THAP6 1 1.67 0.81 38 5.22 80.92 39 6.41 Yes 5 0.47 No 0 0 No -38 0.67 Yes 32 71.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 83824398 + NM_024672 THAP9 1 2.95 0.18 12 5.21 83.57 30 5.74 Yes 22 0.53 No 0 0 No -29 0.9 Yes 41 90.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 83825910 + NM_024672 THAP9 1 4.71 0.22 15 4.26 75.7 27 5.48 No 50 0.81 Yes 0 0 No -26 0.74 Yes 44 69.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 83831849 + NM_024672 THAP9 1 16.84 1.69 54 3.67 86.44 44 5.89 Yes 71 0.82 Yes 24 0.65 Yes -24 0.45 No 46 53.56 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 151862691 - NM_053055 THEM4 1 39.61 7.89 72 8.78 81.85 27 5.04 No 10 1.08 Yes 26 0.87 Yes -26 0.48 No 48 67.44 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 151879883 - NM_053055 THEM4 1 16.77 3.33 67 4.92 76.7 20 5.84 Yes 68 -4.83 No 0 0 No -19 0.58 No 51 57.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151880125 - NM_053055 THEM4 1 0.62 0.11 8 10.69 94.2 16 5.8 Yes 3 1.28 Yes 0 0 No -19 0.79 Yes 51 72.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 143810378 + NM_016647 THEM6 1 6.75 1.67 50 11.28 95.65 33 6.23 Yes 57 0.74 No 0 0 No -29 0.65 No 41 86.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 28206459 + NM_001105556 THEMIS2 1 0.73 0.69 36 8.19 80.99 14 5.24 No 63 0.25 No 0 0 No -24 0.7 Yes 46 58.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 28208310 + NM_001105556 THEMIS2 1 0.12 0.15 10 6.1 81.37 28 5.38 No 58 -4.01 No 0 0 No -27 0.47 No 48 57.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 28209023 + NM_001105556 THEMIS2 1 0.12 0.14 10 4.04 83.7 24 5.83 Yes 62 -3.3 No 23 0.89 Yes -23 0.89 Yes 47 85.97 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 28210134 + NM_001105556 THEMIS2 1 0.68 0.43 23 4.25 79.5 58 8.08 Yes 9 1.73 Yes 0 0 No -21 0.9 Yes 49 81.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 157161587 + NM_001317826 THG1L 1 0.16 0.19 12 -3.28 0 59 9.41 Yes 46 1.09 Yes 0 0 No -58 0.81 Yes 12 94.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 157161678 + NM_001317826 THG1L 1 1.47 1.56 56 10.35 90.86 28 5.29 No 69 1.35 Yes 24 0.68 Yes -21 0.48 No 50 53.98 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 224201 - NM_005131 THOC1 1 4.52 5.07 70 1.32 53.97 66 7.91 Yes 32 1.1 Yes 24 0.65 Yes -44 0.54 No 26 62.75 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 245833 - NM_005131 THOC1 1 2.24 1.83 56 2.32 61.74 25 6.7 Yes 12 1.59 Yes 24 0.96 Yes -24 0.88 Yes 46 79.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 247909 - NM_005131 THOC1 1 0.59 0.65 32 4.8 88.03 36 7.2 Yes 53 1.02 Yes 30 0.52 Yes -30 0.84 Yes 40 78.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 256581 - NM_005131 THOC1 1 0.29 0.18 12 7.54 81.55 29 4.61 No 11 0.43 No 0 0 No -35 0.46 No 35 39.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 260760 - NM_005131 THOC1 1 2.06 1.35 50 5.77 75.4 29 5.55 No 29 1.16 Yes 28 0.78 Yes -28 0.81 Yes 42 84.41 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 266133 - NM_005131 THOC1 1 0.6 0.26 17 3.85 67.03 26 4.56 No 45 0.44 No 0 0 No -25 0.37 No 40 55.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 122736123 - NM_001081550 THOC2 1 0.42 0.29 18 5.34 71.14 33 4.65 No 66 -5.59 No 0 0 No -26 0.32 No 44 70.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 122737600 - NM_001081550 THOC2 1 71.73 49 72 6.77 92.63 55 7.42 Yes 42 1.52 Yes 34 0.13 Yes -27 0.42 No 16 61.36 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 122744145 - NM_001081550 THOC2 1 0.3 0.19 10 13.4 91.79 32 7.71 Yes 19 1.91 Yes 31 0.89 Yes -31 0.81 Yes 39 83.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 122744809 - NM_001081550 THOC2 1 5.26 6.39 70 -1.95 0 37 5.15 No 7 0.63 No 31 0.44 Yes -20 0.64 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 122744819 - NM_001081550 THOC2 1 0.68 0.83 37 -3.25 0 27 4.93 No -3 0.59 No 31 0.44 Yes -10 0.62 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 122747318 - NM_001081550 THOC2 1 0.1 0.13 9 0.28 77.39 16 4.63 No 42 0.48 No 0 0 No -19 0.31 No 54 28.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 122753369 - NM_001081550 THOC2 1 11.93 16 72 5.31 93.48 24 4.9 No 73 0.4 No 26 0.93 Yes -26 0.9 Yes 44 95.03 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 122753384 - NM_001081550 THOC2 1 1.35 1.86 58 -7.35 0 12 3.87 No 74 0.88 Yes 26 0.93 Yes -31 0.35 No 59 33.43 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 122757561 - NM_001081550 THOC2 1 10.43 10.81 72 6.19 73.78 23 5.07 No 62 0.4 No 22 0.88 Yes -22 0.85 Yes 48 80.16 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 122759852 - NM_001081550 THOC2 1 0.08 0.14 8 6.53 86.3 15 6.31 Yes 59 -4.26 No 0 0 No -33 0.83 Yes 37 85.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 122771151 - NM_001081550 THOC2 1 0.46 0.47 21 4.84 84.2 43 8.17 Yes 30 2.05 Yes 0 0 No -42 0.66 No 28 86.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 122771154 - NM_001081550 THOC2 1 1.46 1.43 56 6.07 81.13 40 7.99 Yes 27 2.05 Yes 0 0 No -39 0.76 Yes 31 90.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 122775549 - NM_001081550 THOC2 1 0.18 0.31 16 11.5 95.64 25 6.84 Yes 12 0.65 No 0 0 No -25 0.66 No 45 67.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 122779786 - NM_001081550 THOC2 1 0.16 0.17 10 7.03 93.6 52 7.21 Yes 42 0.24 No 0 0 No -32 0.66 No 38 64.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 122800437 - NM_001081550 THOC2 1 0.14 0.17 9 9.67 89.76 21 5.2 No 20 0.3 No 0 0 No -20 0.61 No 50 83.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 122805815 - NM_001081550 THOC2 1 0.1 0.13 9 8.07 90.21 26 6.57 Yes 42 0.93 Yes 0 0 No -25 0.7 Yes 45 45.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 122812073 - NM_001081550 THOC2 1 0.86 1.17 44 2.95 81.84 21 4.8 No 8 1.72 Yes 0 0 No -20 0.82 Yes 50 94.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 122817762 - NM_001081550 THOC2 1 0.25 0.33 17 7.51 79.36 28 7.36 Yes 36 1.67 Yes 0 0 No -27 0.69 Yes 45 53.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 122830686 - NM_001081550 THOC2 1 0.12 0.19 10 -2.77 0 14 4 No 18 0.91 Yes 23 0.78 Yes -13 0.47 No 40 56.22 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 29912134 - NM_001002878 THOC5 1 0.15 0.15 9 9.53 93.23 72 6.29 Yes 59 1.25 Yes 0 0 No -23 0.85 Yes 47 90.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29924164 - NM_001002878 THOC5 1 0.91 0.97 41 1.14 74.62 31 5.83 Yes 24 0.92 Yes 0 0 No -30 0.96 Yes 40 96.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29927100 - NM_001002878 THOC5 1 6.11 6.07 72 7.72 81.67 84 7.8 Yes 64 1.35 Yes 33 0.21 Yes -38 0.52 No 44 22.26 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 29933874 - NM_001002878 THOC5 1 0.14 0.13 8 6.49 92.41 32 3.73 No 40 0.35 No 0 0 No -31 0.42 No 39 56.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 3075712 + NM_024339 THOC6 1 1.06 0.9 38 0.05 0 24 5.1 No 11 1.14 Yes 19 0.95 Yes -23 0.96 Yes 47 95.39 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 3076045 + NM_024339 THOC6 1 1.16 1.07 47 0.6 74.54 30 6 Yes 68 -5.42 No 24 0.97 Yes -29 0.86 Yes 41 51.64 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 3077254 + NM_024339 THOC6 1 0.1 0.13 8 2.95 72.56 61 7.52 Yes 48 1.72 Yes 0 0 No -30 0.58 No 40 69.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 63819875 - NM_001285387 THOC7 1 0.04 0.19 11 -13 0 34 5.08 No 17 0.82 Yes 0 0 No -29 0.42 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 63820934 - NM_001285387 THOC7 1 0.21 1.13 45 6.83 84.9 39 6.91 Yes 26 0.71 No 31 0.66 Yes -41 0.69 Yes 29 87.1 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 63822627 - NM_001285387 THOC7 1 0.03 0.18 11 5.6 73.3 25 3.83 No 2 0.28 No 0 0 No -24 0.8 Yes 46 71.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 63825450 - NM_001285387 THOC7 1 1157.61 101.9 72 11.31 91.78 23 6.08 Yes 10 1.45 Yes 24 0.45 Yes -22 0.87 Yes 48 87.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 2790130 + NM_003249 THOP1 1 0.12 0.22 11 6.46 85.77 36 7.68 Yes 23 1.53 Yes 0 0 No -35 0.86 Yes 35 89.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2790172 + NM_003249 THOP1 1 0.44 0.72 37 3.59 79.69 36 6.24 Yes 65 1.52 Yes 0 0 No -35 0.86 Yes 35 81.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2792019 + NM_003249 THOP1 1 0.05 0.14 8 7.9 85.2 27 8.37 Yes 14 1.33 Yes 0 0 No -25 0.67 Yes 44 68.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2794790 + NM_003249 THOP1 1 0.94 2.21 60 5.87 84.12 12 5.54 No 48 1.73 Yes 26 0.84 Yes -26 0.66 No 44 54.03 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 2794808 + NM_003249 THOP1 1 0.25 0.57 31 5.49 80.48 21 5.2 No 66 1.73 Yes 0 0 No -25 0.8 Yes 41 81.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2796081 + NM_003249 THOP1 1 0.07 0.15 7 -10.98 80.29 19 7.66 Yes 6 0.93 Yes 0 0 No -26 0.84 Yes 44 89.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2800827 + NM_003249 THOP1 1 0.08 0.15 10 7.81 78.78 23 6.44 Yes 10 0.84 Yes 0 0 No -22 0.88 Yes 48 74.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2803589 + NM_003249 THOP1 1 0.09 0.15 9 5.51 76.61 22 7.2 Yes 9 1.27 Yes 0 0 No -21 0.78 Yes 48 62.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 2804608 + NM_003249 THOP1 1 0.48 0.88 34 7.07 87.64 21 6.4 Yes 8 2.12 Yes 20 0.87 Yes -20 0.91 Yes 50 93.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 2808815 + NM_003249 THOP1 1 0.38 0.4 25 10.48 94.9 46 9.85 Yes 33 0.96 Yes 0 0 No -45 0.93 Yes 25 93.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 2809913 + NM_003249 THOP1 1 0.12 0.15 10 3.79 77.42 22 3.81 No 9 0.18 No 0 0 No -21 0.95 Yes 49 93.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2811631 + NM_003249 THOP1 1 1.88 4 70 5.56 77.42 31 6.7 Yes 48 0.11 No 31 0.51 Yes -30 0.47 No 40 54.3 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 2812024 + NM_003249 THOP1 1 0.08 0.13 8 8.61 84.51 25 5.39 No 58 -2.43 No 24 0.77 Yes -27 0.74 Yes 48 49.16 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 2812196 + NM_003249 THOP1 1 0.46 0.64 33 7.79 79.91 22 6.93 Yes 9 0.61 No 21 0.66 Yes -21 0.78 Yes 49 84.9 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 36690571 + NM_005119 THRAP3 1 0.69 1.29 45 9.66 87.64 30 5.48 No 17 0.44 No 23 0.72 Yes -23 0.46 No 50 50.44 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 36691012 + NM_005119 THRAP3 1 3.18 6.07 71 8.65 87.45 31 6.74 Yes 18 0.51 No 30 0.7 Yes -30 0.6 No 40 69.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 36703621 + NM_005119 THRAP3 1 0.1 0.19 11 8.53 86.46 35 6.08 Yes 22 0.4 No 0 0 No -30 0.88 Yes 40 92.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36704351 + NM_005119 THRAP3 1 0.69 1.28 55 4.42 88.12 22 3.89 No 50 0.31 No 0 0 No -26 0.53 No 48 58.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 36710792 + NM_005119 THRAP3 1 0.24 0.46 27 3.36 0 42 7.9 Yes 29 1.64 Yes 0 0 No -28 0.48 No 42 59.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36724266 + NM_005119 THRAP3 1 0.4 0.78 35 6.49 80.12 25 7.48 Yes 12 1.31 Yes 0 0 No -24 0.93 Yes 46 93.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36724985 + NM_005119 THRAP3 1 0.08 0.17 11 2.14 73.19 28 4.87 No 46 1.04 Yes 0 0 No -30 0.52 No 43 83.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 36738333 + NM_005119 THRAP3 1 0.03 0.1 7 8.71 80.93 30 5.65 Yes 17 0.98 Yes 0 0 No -29 0.94 Yes 41 95.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 36748135 + NM_005119 THRAP3 1 0.05 0.14 9 -15.82 0 36 5.58 Yes 9 1.67 Yes 0 0 No -35 0.66 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 36750113 + NM_005119 THRAP3 1 0.15 0.82 35 8.08 77.83 44 7.52 Yes 22 0.72 No 0 0 No -34 0.89 Yes 36 93.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36750118 + NM_005119 THRAP3 1 0.09 0.51 25 -5.79 0 49 7.8 Yes 27 0.71 No 0 0 No -39 0.74 Yes 31 90.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36751974 + NM_005119 THRAP3 1 0.02 0.13 7 5.8 0 14 3.87 No 24 0.48 No 0 0 No -36 0.67 Yes 34 60.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 36753077 + NM_005119 THRAP3 1 0.59 2.79 62 7.67 82.08 38 6.17 Yes 25 1.54 Yes 0 0 No -37 0.62 No 33 78.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 36758219 + NM_005119 THRAP3 1 0.09 0.46 21 6.34 87.71 16 4.51 No 33 1.14 Yes 0 0 No -26 0.25 No 45 74.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 36759650 + NM_005119 THRAP3 1 1.1 4.46 69 11.14 88.95 23 4.13 No 21 0.55 No 22 0.89 Yes -22 0.87 Yes 48 92.54 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 36767156 + NM_005119 THRAP3 1 48.29 120.61 72 -0.19 73.15 39 8.6 Yes 26 1.05 Yes 0 0 No -38 0.7 Yes 29 77.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 24026629 + NM_024328 THTPA 1 0.85 0.39 24 5.56 87 20 6.38 Yes 7 0.08 No 0 0 No -19 0.71 Yes 51 61.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 20746810 - NM_001304550 THUMPD1 1 0.81 0.42 22 8.85 88.93 29 5.28 No 16 0.53 No 0 0 No -28 0.54 No 49 60 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 20746988 - NM_001304550 THUMPD1 1 0.87 0.4 21 6.03 88.87 25 5.38 No 60 1.33 Yes 0 0 No -24 0.87 Yes 46 87.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 20749277 - NM_001304550 THUMPD1 1 0.22 0.29 13 -1.5 81.3 22 6.51 Yes 9 1.24 Yes 0 0 No -22 0.56 No 40 59.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 20749592 - NM_001304550 THUMPD1 1 0.37 0.43 22 8.37 93.8 20 6.29 Yes 53 1.28 Yes 24 0.72 Yes -27 0.56 No 46 47.54 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 39978331 - NR_135659 THUMPD2 1 1.56 0.57 33 5.49 75.34 87 8.83 Yes 20 0.63 No 0 0 No -32 0.75 Yes 38 69.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 39988575 - NR_135659 THUMPD2 1 0.22 0.1 7 2.63 70.14 48 7.03 Yes 35 0.64 No 21 0.61 Yes -43 0.58 No 27 70.13 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 9405837 + NM_015453 THUMPD3 1 0.59 0.11 8 6.05 77.28 28 5.51 No 75 0.47 No 0 0 No -27 0.91 Yes 43 79.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 9406704 + NM_015453 THUMPD3 1 1.68 0.42 25 -0.38 0 38 6.42 Yes 25 0.32 No 0 0 No -37 0.62 No 35 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 9423042 + NM_015453 THUMPD3 1 0.25 0.18 10 11.14 82.53 43 5.01 No 2 1.52 Yes 0 0 No -26 0.84 Yes 44 78.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9424455 + NM_015453 THUMPD3 1 0.45 0.29 19 4.93 84.17 28 5.83 Yes 44 0.89 Yes 0 0 No -27 0.86 Yes 43 74.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9437264 - NR_027007 THUMPD3-AS1 1 3.9 0.24 11 7.69 80.79 27 7.34 Yes 73 1.26 Yes 32 0.82 Yes -32 0.58 No 38 72.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 134118731 - NM_001037304 THYN1 1 5.34 2.01 62 5.5 86.55 28 6.89 Yes 62 0.68 No 0 0 No -28 0.59 No 42 47.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 134118854 - NM_001037304 THYN1 1 301.14 113.71 72 7.58 79.8 44 6.69 Yes 52 -2.33 No 21 0.62 Yes -21 0.51 No 49 72.09 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 134118854 - NM_001037304 THYN1 1 1.08 0.47 25 7.58 79.8 44 6.69 Yes 52 -2.33 No 21 0.62 Yes -21 0.51 No 49 72.09 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 134120233 - NM_001037304 THYN1 1 0.23 0.39 22 4.15 0 31 5.73 Yes 40 1.19 Yes 28 0.87 Yes -30 0.54 No 40 65.86 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 70439974 - NM_022173 TIA1 1 0.56 1.1 45 -1.47 0 52 7.37 Yes 6 0.54 No 0 0 No -51 0.83 Yes 19 94.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 70441624 - NM_022173 TIA1 1 11.57 20.38 72 2.98 82.93 35 4.33 No 6 0.83 Yes 26 0.78 Yes -22 0.38 No 46 55.33 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 70442366 - NM_022173 TIA1 1 0.7 1.25 49 6.71 70.11 26 5.66 Yes 53 0.72 No 26 0.66 Yes -26 0.52 No 42 52.54 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 70452526 - NM_022173 TIA1 1 5.03 6.29 72 6.69 88.49 24 5.26 No 75 0.12 No 23 0.7 Yes -21 0.45 No 47 64.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 70452701 - NM_022173 TIA1 1 2.13 2.64 66 0.21 75.5 23 7.41 Yes 10 1.33 Yes 0 0 No -22 0.85 Yes 48 78.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 70454924 - NM_022173 TIA1 1 0.48 0.46 22 3.5 73.98 37 4.72 No 63 1.49 Yes 28 0.52 Yes -36 0.52 No 34 64.37 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 70455595 - NM_022173 TIA1 1 11.68 10.89 72 7.9 87.4 34 5.48 No 13 0.62 No 25 0.85 Yes -25 0.62 No 45 67.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 70455595 - NM_022173 TIA1 1 0.69 0.58 32 7.9 87.4 34 5.48 No 13 0.62 No 25 0.85 Yes -25 0.62 No 45 67.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 70456220 - NM_022173 TIA1 1 0.08 0.13 9 -3.38 0 19 4.23 No 6 1.28 Yes 0 0 No -31 0.41 No 39 41.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 70457983 - NM_022173 TIA1 1 0.1 0.15 9 3.62 0 35 4.85 No 22 0.02 No 0 0 No -35 0.89 Yes 35 88.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 70460895 - NM_022173 TIA1 1 0.17 0.25 15 11.04 88.27 24 5.81 Yes 11 1.41 Yes 0 0 No -28 0.58 No 47 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 70463334 - NM_022173 TIA1 1 0.12 0.14 9 -1.36 40.37 27 6.05 Yes 14 0.35 No 23 0.46 Yes -26 0.69 Yes 44 58.97 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 70466017 - NM_022173 TIA1 1 0.28 0.39 21 7.73 86.87 31 7.48 Yes 18 1.9 Yes 0 0 No -30 0.87 Yes 40 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121336418 - NM_001323968 TIAL1 1 0.89 3.75 71 11.18 95.96 29 7.56 Yes 5 0.82 Yes 24 0.84 Yes -28 0.82 Yes 42 85.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 121337248 - NM_001323968 TIAL1 1 0.05 0.22 13 -15.13 0 36 6.28 Yes 17 0.55 No 0 0 No -29 0.55 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 121339541 - NM_001323968 TIAL1 1 0.04 0.14 9 8.42 76.86 16 4.29 No 3 0.94 Yes 24 0.94 Yes -27 0.81 Yes 43 72.49 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 121340051 - NM_001323968 TIAL1 1 0.68 1.76 58 6.69 77.5 28 5.2 No 57 0.5 No 27 0.82 Yes -27 0.83 Yes 43 60.32 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 121340359 - NM_001323968 TIAL1 1 0.67 1.81 56 8.41 88.49 24 5.29 No 53 0.14 No 23 0.9 Yes -24 0.44 No 47 67.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 121342070 - NM_001323968 TIAL1 1 140.17 198.9 72 8.23 91.78 31 5.91 Yes 66 1.4 Yes 30 0.45 Yes -30 0.81 Yes 40 83.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 121342070 - NM_001323968 TIAL1 1 0.15 0.22 11 8.23 91.78 31 5.91 Yes 66 1.4 Yes 30 0.45 Yes -30 0.81 Yes 40 83.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 121342789 - NM_001323968 TIAL1 1 0.4 0.6 32 4.48 82.26 30 5.61 Yes 22 0.12 No 0 0 No -29 0.92 Yes 41 96.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 121343258 - NM_001323968 TIAL1 1 0.09 0.13 7 8.98 88.26 26 6.24 Yes 13 1.28 Yes 0 0 No -25 0.94 Yes 45 93.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 121344632 - NM_001323968 TIAL1 1 0.3 0.42 18 4.74 84.41 29 5.81 Yes 20 1.3 Yes 0 0 No -28 0.63 No 42 62.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 121348217 - NM_001323968 TIAL1 1 0.54 0.25 17 6.75 86.32 16 3.72 No 3 0.86 Yes 0 0 No -26 0.76 Yes 44 68.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 121350917 - NM_001323968 TIAL1 1 1.47 0.69 37 11.46 95.65 23 5.21 No 20 0.56 No 0 0 No -28 0.57 No 42 52.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 121350917 - NM_001323968 TIAL1 1 0.42 0.21 13 11.46 95.65 23 5.21 No 20 0.56 No 0 0 No -28 0.57 No 42 52.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 121351630 - NM_001323968 TIAL1 1 0.67 0.32 18 9.24 84.05 35 6.85 Yes 71 1.08 Yes 38 0.62 Yes -34 0.86 Yes 36 86.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 121351809 - NM_001323968 TIAL1 1 0.72 0.39 20 4.36 85.38 24 4.84 No 63 0.98 Yes 23 0.82 Yes -23 0.93 Yes 47 96.57 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 121353063 - NM_001323968 TIAL1 1 6.39 0.99 48 5.46 81.18 31 5.5 No 18 0.36 No 24 0.83 Yes -31 0.45 No 39 69.47 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 121355684 - NM_001323968 TIAL1 1 0.95 0.17 9 8.99 78.8 41 6.89 Yes 55 -0.23 No 0 0 No -40 0.71 Yes 30 78.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 155561692 + NM_012454 TIAM2 1 0.47 0.1 7 2.24 80.88 23 4.13 No 19 -1.58 No 22 0.93 Yes -22 0.7 Yes 48 76.95 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 155567235 + NM_012454 TIAM2 1 0.87 0.24 14 3.8 77.38 39 7.59 Yes -1 1.05 Yes 0 0 No -38 0.67 Yes 32 80.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4818344 - NM_182919 TICAM1 1 1.39 0.54 27 5.68 79.31 27 5.1 No 14 -1.5 No 0 0 No -22 0.72 Yes 51 46.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 90127516 + NM_001308025 TICRR 1 522.79 41.54 72 6.14 82.96 19 6.52 Yes 2 0.83 Yes 18 0.66 Yes -18 0.57 No 52 85.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 90128924 + NM_001308025 TICRR 1 1.01 0.25 15 4.62 71.45 25 6.37 Yes 69 0.07 No 19 0.95 Yes -24 0.84 Yes 46 86.63 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 90132142 + NM_001308025 TICRR 1 1.04 0.24 13 7.99 84.22 29 5.74 Yes 16 0.3 No 0 0 No -28 0.91 Yes 42 91.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 90135292 + NM_001308025 TICRR 1 2.14 0.51 25 6.55 89.87 20 4.9 No 44 1.68 Yes 0 0 No -56 0.6 No 50 71.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 90138682 + NM_001308025 TICRR 1 0.77 0.31 14 6.45 75.73 25 5.81 Yes 62 1.5 Yes 0 0 No -23 0.59 No 47 65.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 90145129 + NM_001308025 TICRR 1 0.67 0.33 18 4.78 79.18 31 6.61 Yes 18 0.82 Yes 0 0 No -30 0.61 No 40 76.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 90160777 + NM_001308025 TICRR 1 0.58 0.15 8 6.93 87.47 26 7.23 Yes 13 2.17 Yes 0 0 No -25 0.92 Yes 45 94.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 113202929 - NM_052864 TIFA 1 1.71 3.93 54 3.74 73.88 47 6.38 Yes 34 1.44 Yes 0 0 No -46 0.75 Yes 24 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 4432957 + NM_020375 TIGAR 1 0.23 0.26 16 9.58 86.74 34 5.89 Yes 21 0.41 No 0 0 No -33 0.58 No 37 48.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 4433720 + NM_020375 TIGAR 1 0.39 0.68 31 4.86 78.07 27 6.39 Yes 68 1.41 Yes 0 0 No -23 0.59 No 47 48.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 4433738 + NM_020375 TIGAR 1 0.05 0.11 7 6.41 85.01 15 5.2 No 71 0.67 No 0 0 No -35 0.42 No 53 34.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 4433831 + NM_020375 TIGAR 1 0.24 0.47 23 8.64 92.32 27 5.06 No 71 0.92 Yes 0 0 No -26 0.89 Yes 44 78.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 4440421 + NM_020375 TIGAR 1 0.13 0.18 9 1.7 69.7 27 5.19 No 31 1.09 Yes 29 0.92 Yes -26 0.61 No 27 56.17 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 4460433 + NM_020375 TIGAR 1 0.05 0.13 7 -14.81 0 31 4.2 No 74 -2.75 No 0 0 No -30 0.53 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 56811608 - NM_003920 TIMELESS 1 0.44 0.53 27 5.53 70.62 42 6.23 Yes 59 0.62 No 19 0.85 Yes -28 0.46 No 44 30.18 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 56815796 - NM_003920 TIMELESS 1 0.44 0.49 24 0.72 0 24 5.48 No 37 0.2 No 25 0.29 Yes -27 0.66 Yes 39 78.38 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 56815817 - NM_003920 TIMELESS 1 0.13 0.15 9 6.08 76.78 29 5.92 Yes 16 0.06 No 18 0.63 Yes -28 0.85 Yes 42 80.05 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 56818714 - NM_003920 TIMELESS 1 0.26 0.19 12 7.52 72.15 43 6.82 Yes 63 0.03 No 20 0.59 Yes -33 0.66 Yes 28 79.17 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 56819652 - NM_003920 TIMELESS 1 0.21 0.17 12 6.67 92.56 62 6.92 Yes 45 2.35 Yes 0 0 No -33 0.53 No 37 55.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56819655 - NM_003920 TIMELESS 1 0.58 0.42 19 4.91 81.81 59 6.79 Yes 42 2.36 Yes 0 0 No -30 0.69 Yes 40 65.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 56824006 - NM_003920 TIMELESS 1 0.31 0.29 17 1.75 74.22 12 5.19 No 70 1.39 Yes 0 0 No -11 0.44 No 59 32.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 56824196 - NM_003920 TIMELESS 1 0.25 0.19 11 1.23 82.17 21 6.16 Yes 74 -4.13 No 0 0 No -23 0.69 Yes 47 84.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 56826220 - NM_003920 TIMELESS 1 0.07 0.11 7 8.29 85.62 23 6.47 Yes 10 1.37 Yes 0 0 No -22 0.81 Yes 48 77.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 56826306 - NM_003920 TIMELESS 1 14.77 18.28 72 -2.24 68.84 42 6.14 Yes 7 1.7 Yes 22 0.7 Yes -41 0.64 No 29 67.36 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 56826916 - NM_003920 TIMELESS 1 0.16 0.17 11 1.72 0 13 5.73 Yes 0 1.17 Yes 22 0.41 Yes -18 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 56827244 - NM_003920 TIMELESS 1 1.5 1.22 51 0.31 0 19 5.32 No 6 0.92 Yes 24 0.91 Yes -30 0.39 No 50 27.22 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 56827249 - NM_003920 TIMELESS 1 0.96 0.64 29 -1.88 67.14 14 4.89 No 1 0.94 Yes 24 0.91 Yes -25 0.57 No 40 65.52 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 56827709 - NM_003920 TIMELESS 1 0.1 0.1 7 -9.11 70.61 31 5.04 No 71 -2.82 No 0 0 No -28 0.71 Yes 42 83.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 57297767 - NM_012456 TIMM10 1 2.78 9.97 72 5.79 79.97 20 5.1 No 7 0.72 No 19 0.4 Yes -19 0.74 Yes 51 86.36 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 57298012 - NM_012456 TIMM10 1 0.25 0.9 36 7.21 83.37 14 5.22 No 69 1.03 Yes 0 0 No -21 0.94 Yes 49 95.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 6503277 + NM_012192 TIMM10B 1 0.2 0.26 14 -7.17 80.47 23 5.8 Yes 11 0.39 No 0 0 No -23 0.88 Yes 47 84.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2427042 - NM_012458 TIMM13 1 0.06 0.25 15 -1.22 63.81 30 6 Yes 17 0.73 No 0 0 No -29 0.84 Yes 41 85.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 2427341 - NM_012458 TIMM13 1 0.06 0.21 13 -2.12 63.07 38 6.48 Yes NA NA NA 21 0.89 Yes -37 0.29 No 18 10.95 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 201926409 + NM_006335 TIMM17A 1 0.05 0.17 9 -11.62 0 36 4.83 No 27 0.1 No 0 0 No -29 0.62 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 201926952 + NM_006335 TIMM17A 1 0.03 0.11 7 10.97 93.04 26 6.63 Yes 13 1.37 Yes 0 0 No -25 0.84 Yes 45 88.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 201927966 + NM_006335 TIMM17A 1 1.04 3.58 66 5.26 83.11 32 7.74 Yes 19 1.07 Yes 0 0 No -31 0.7 Yes 39 62.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 201932800 + NM_006335 TIMM17A 1 0.17 0.54 29 -3.8 0 19 4.47 No 6 0.01 No 0 0 No -18 0.95 Yes 52 83.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 201933797 + NM_006335 TIMM17A 1 0.02 0.1 7 4.78 84.41 50 5.37 No 56 2.03 Yes 0 0 No -49 0.41 No 21 60.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 201936699 + NM_006335 TIMM17A 1 0.02 0.11 8 7.45 88.56 35 4.52 No 57 1 Yes 0 0 No -30 0.32 No 36 54.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 48751115 - NM_001167947 TIMM17B 1 0.22 0.47 23 2.43 69.76 14 6.94 Yes 1 1.28 Yes 21 0.96 Yes -31 0.61 No 39 69.48 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 48752738 - NM_001167947 TIMM17B 1 6.43 0.83 38 4.4 77.67 32 6.08 Yes 19 1.24 Yes 31 0.89 Yes -31 0.47 No 39 70.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chrX 48752780 - NM_001167947 TIMM17B 1 2.07 0.25 16 2.01 0 34 6.24 Yes 38 2.16 Yes 31 0.89 Yes -33 0.62 No 37 77.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chrX 48753428 - NM_001167947 TIMM17B 1 1.03 0.11 7 2.8 0 34 7.37 Yes 47 -1.04 No 0 0 No -33 0.5 No 37 63.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 71817821 + NM_014177 TIMM21 1 0.15 0.18 10 6.06 85.02 38 5.38 No 69 -3.44 No 0 0 No -30 0.4 No 38 51.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 71825617 + NM_014177 TIMM21 1 0.1 0.13 8 -0.72 0 10 4 No 58 0.72 No 0 0 No -35 0.72 Yes 35 67.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 71825653 + NM_014177 TIMM21 1 0.12 0.13 8 5.46 75.57 28 5.22 No 33 -2.7 No 0 0 No -27 0.35 No 46 67.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 51740948 + NR_135475 TIMM23B 1 2.03 0.13 9 10.34 97.35 30 7.97 Yes 17 2.09 Yes 29 0.88 Yes -29 0.91 Yes 41 94.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 51740948 + NR_135475 TIMM23B 1 47.91 2.26 67 10.34 97.35 30 7.97 Yes 17 2.09 Yes 29 0.88 Yes -29 0.91 Yes 41 94.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 51741876 + NR_135475 TIMM23B 1 5.89 0.35 19 7.67 78.06 22 5.19 No 64 0.9 Yes 0 0 No -25 0.63 No 45 64.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7996632 - NM_006351 TIMM44 1 0.2 0.25 14 9.43 89.23 44 6.63 Yes 40 1.45 Yes 0 0 No -25 0.52 No 36 63.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 7998086 - NM_006351 TIMM44 1 0.81 1.06 45 8.3 83.53 24 5.29 No 72 -1.62 No 0 0 No -21 0.75 Yes 49 80.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 7998428 - NM_006351 TIMM44 1 0.3 0.39 23 -0.84 70.38 31 5.74 Yes 42 1.65 Yes 0 0 No -54 0.9 Yes 16 90.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7999122 - NM_006351 TIMM44 1 0.1 0.14 9 -1.83 0 32 7.14 Yes 60 0.51 No 0 0 No -31 0.76 Yes 39 83.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 7999127 - NM_006351 TIMM44 1 2.58 3.71 67 8.05 81.59 27 6.78 Yes 55 0.51 No 27 0.89 Yes -26 0.75 Yes 44 82.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 7999127 - NM_006351 TIMM44 1 0.12 0.11 7 8.05 81.59 27 6.78 Yes 55 0.51 No 27 0.89 Yes -26 0.75 Yes 44 82.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 8000019 - NM_006351 TIMM44 1 0.1 0.14 8 -18.83 0 19 4.58 No 42 -1.36 No 0 0 No -18 0.81 Yes 16 15.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 39973432 + NM_001001563 TIMM50 1 0.07 0.14 8 12.88 87.69 29 5.66 Yes 21 0.62 No 0 0 No -28 0.61 No 45 58.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39974199 + NM_001001563 TIMM50 1 0.3 0.71 31 4.69 77.75 48 7.49 Yes 35 0.13 No 0 0 No -47 0.47 No 23 57.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 39975788 + NM_001001563 TIMM50 1 0.38 0.83 37 8.43 82.86 27 7.62 Yes 14 1.5 Yes 29 0.91 Yes -26 0.95 Yes 44 96 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 39976364 + NM_001001563 TIMM50 1 0.15 0.44 23 6.97 87.1 23 5.1 No 54 1.47 Yes 0 0 No -22 0.73 Yes 48 73.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 39979144 + NM_001001563 TIMM50 1 0.19 0.51 21 6.54 77.44 29 7.35 Yes 51 2.12 Yes 23 0.98 Yes -28 0.97 Yes 42 96.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 58875800 - NM_012460 TIMM9 1 1.28 3.44 67 0.37 77.21 28 5.02 No 64 -5.11 No 24 0.34 Yes -20 0.72 Yes 50 72.46 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 58875803 - NM_012460 TIMM9 1 0.79 2.15 60 -0.55 73.27 25 4.73 No 61 -4.92 No 27 0.55 Yes -17 0.41 No 53 71.79 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 58875818 - NM_012460 TIMM9 1 2.03 5.64 72 -2.21 0 10 3.72 No 46 -3.98 No 27 0.55 Yes -27 0.82 Yes 43 70.6 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 58875825 - NM_012460 TIMM9 1 0.22 0.61 29 -14.74 0 21 4.58 No 39 -3.53 No 27 0.55 Yes -20 0.87 Yes 31 48.88 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 58877466 - NM_012460 TIMM9 1 0.23 0.61 27 8.35 91.27 30 3.94 No 17 0.61 No 0 0 No -26 0.55 No 44 73.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 58882939 - NM_012460 TIMM9 1 0.12 0.22 13 6.36 93.02 46 5.16 No 50 0.72 No 0 0 No -29 0.88 Yes 41 88.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 58887740 - NM_012460 TIMM9 1 0.24 0.49 26 9.86 89.16 24 6.1 Yes 30 0.3 No 0 0 No -23 0.59 No 47 60.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 58888429 - NM_012460 TIMM9 1 0.04 0.1 7 0.53 0 13 4.36 No 42 0.67 No 0 0 No -22 0.67 Yes 48 72.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 58890568 - NM_012460 TIMM9 1 0.09 0.19 12 13.75 91.57 38 6.36 Yes 25 0.81 Yes 21 0.78 Yes -21 0.71 Yes 49 78.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 119222805 + NM_016589 TIMMDC1 1 0.66 1.42 54 2.15 0 41 6.13 Yes 28 0.85 Yes 0 0 No -34 0.74 Yes 36 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119224230 + NM_016589 TIMMDC1 1 0.06 0.11 8 4.23 84.41 33 5.56 Yes 63 1.41 Yes 0 0 No -32 0.53 No 38 58.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 119234139 + NM_016589 TIMMDC1 1 0.06 0.11 8 10.7 98.59 22 4.79 No 9 0.76 No 0 0 No -21 0.91 Yes 49 89.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 119234706 + NM_016589 TIMMDC1 1 0.09 0.15 7 6.06 80.59 21 5.2 No 21 0.43 No 0 0 No -20 0.48 No 50 82.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 119234725 + NM_016589 TIMMDC1 1 0.07 0.14 9 3.48 74 25 5.23 No 40 0.4 No 0 0 No -24 0.68 Yes 46 66.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 47444952 + NM_003254 TIMP1 1 0.15 0.29 18 -0.45 0 14 4.47 No 47 0.07 No 0 0 No -51 0.75 Yes 19 74.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 54191595 + NM_014464 TINAG 1 4.25 0.79 33 4.85 79.72 41 7.27 Yes 28 0.95 Yes 44 0.41 Yes -40 0.46 No 30 65.6 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 24709387 - NM_001099274 TINF2 1 0.77 0.22 12 -14.14 0 16 3.87 No 17 0.21 No 21 0.78 Yes -15 0.62 No 16 44.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 24709390 - NM_001099274 TINF2 1 1.1 0.38 17 -6.44 0 13 3.87 No 14 0.19 No 21 0.78 Yes -26 0.37 No 44 43.9 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 24709483 - NM_001099274 TINF2 1 0.5 0.17 10 7.79 86.35 24 5.38 No 11 1.13 Yes 22 0.54 Yes -23 0.79 Yes 47 65.78 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 156398262 + NM_001184718 TIPARP 1 0.65 0.82 30 9.8 89.13 17 5.71 Yes 4 1.7 Yes 0 0 No -28 0.54 No 42 77.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 156411810 + NM_001184718 TIPARP 1 0.17 0.21 12 2.23 88.31 42 6.77 Yes 29 0.9 Yes 0 0 No -41 0.94 Yes 29 96.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 156414167 + NM_001184718 TIPARP 1 0.24 0.28 17 6.77 93.51 20 4.71 No 56 0.58 No 0 0 No -25 0.68 Yes 45 65.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 66645292 - NM_001289986 TIPIN 1 0.88 0.36 19 0.51 86.28 23 7.26 Yes 10 1.13 Yes 0 0 No -27 0.37 No 48 47.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 168152648 + NM_152902 TIPRL 1 0.11 0.28 12 6.15 84.54 35 5.94 Yes 22 0.92 Yes 0 0 No -44 0.45 No 26 66.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 168161414 + NM_152902 TIPRL 1 0.3 0.65 35 6.68 82.17 22 6.46 Yes 9 0.61 No 28 0.71 Yes -26 0.41 No 36 45.17 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 168161445 + NM_152902 TIPRL 1 0.65 1.46 45 6.53 82.68 26 4.65 No 9 0.7 No 28 0.71 Yes -25 0.64 No 45 79.6 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 168168462 + NM_152902 TIPRL 1 0.62 2.1 62 8.42 78.96 26 4.63 No 68 2.1 Yes 0 0 No -25 0.62 No 45 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 168168464 + NM_152902 TIPRL 1 0.03 0.11 7 -2.36 82.18 28 4.74 No 70 2.1 Yes 0 0 No -27 0.6 No 43 81.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 168169185 + NM_152902 TIPRL 1 0.11 0.36 20 0.16 65.42 38 5.44 No 55 0.7 No 0 0 No -24 0.72 Yes 46 70.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 126161167 + NM_001039661 TIRAP 1 0.51 0.14 9 8.45 85.74 35 6.74 Yes 64 1.14 Yes 34 0.88 Yes -35 0.51 No 35 76.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 126161319 + NM_001039661 TIRAP 1 4.79 1.29 51 9.87 87.95 22 5 No 9 0.6 No 21 0.96 Yes -21 0.88 Yes 49 90.5 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 43466660 + NM_001146017 TJAP1 1 12.16 3.75 68 8.81 90.75 22 7.92 Yes 9 1.16 Yes 21 0.84 Yes -21 0.81 Yes 49 75.13 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 43466665 + NM_001146017 TJAP1 1 1.94 0.53 28 2.54 0 27 8.23 Yes 14 1.12 Yes 0 0 No -26 0.86 Yes 44 89.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43466712 + NM_001146017 TJAP1 1 105.15 31.89 72 7.29 88.32 26 5.66 Yes 13 1.52 Yes 25 0.94 Yes -25 0.92 Yes 45 93.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 43472036 + NM_001146017 TJAP1 1 0.92 0.49 26 6.79 85.02 19 7.07 Yes 6 1.32 Yes 0 0 No -18 0.62 No 52 84.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 43472039 + NM_001146017 TJAP1 1 1.31 0.64 32 4.88 82.69 22 7.28 Yes 9 1.28 Yes 0 0 No -21 0.84 Yes 49 90.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43472325 + NM_001146017 TJAP1 1 0.92 0.5 28 9.96 91.28 21 5.2 No 20 0.56 No 0 0 No -20 0.67 Yes 50 53.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 43473361 + NM_001146017 TJAP1 1 0.75 0.42 24 7.8 90.42 17 5.57 Yes 4 1.71 Yes 0 0 No -29 0.54 No 54 52.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 71868881 + NM_001170414 TJP2 1 0.2 0.18 11 5.77 84.78 25 5.29 No 65 0.3 No 0 0 No -24 0.8 Yes 45 37.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 76176397 - NM_001346663 TK1 1 0.98 2.26 57 9.75 88.7 26 5.48 No 75 0.5 No 0 0 No -25 0.71 Yes 45 70.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76179859 - NM_001346663 TK1 1 0.24 0.53 28 7.95 87.18 16 7.23 Yes 64 1.63 Yes 28 0.47 Yes -23 0.57 No 47 51.65 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 76182478 - NM_001346663 TK1 1 0.05 0.13 8 9.04 84.4 23 7.23 Yes 10 0.06 No 0 0 No -22 0.9 Yes 48 90.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61101020 + NM_015533 TKFC 1 7.14 3.78 66 9.08 83.96 39 6.05 Yes -2 -0.01 No 31 0.48 Yes -31 0.7 Yes 39 57.68 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 61103311 + NM_015533 TKFC 1 2.82 2.31 64 6.74 93.38 28 5.29 No 35 -1.3 No 27 0.82 Yes -27 0.8 Yes 43 67.14 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 61103675 + NM_015533 TKFC 1 0.24 0.24 11 10.2 88.24 24 6.08 Yes 30 0.41 No 23 0.94 Yes -23 0.82 Yes 47 79.36 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 61109852 + NM_015533 TKFC 1 0.36 0.24 16 -0.75 0 55 8.03 Yes 42 0.34 No 27 0.65 Yes -54 0.84 Yes 16 91.46 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 61113291 + NM_015533 TKFC 1 0.22 0.14 9 2.88 83.5 21 4.9 No 39 0.86 Yes 26 0.94 Yes -20 0.78 Yes 50 70.29 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 61113766 + NM_015533 TKFC 1 5.61 3.38 69 5.57 84.15 27 4.87 No 69 -2.77 No 22 0.66 Yes -27 0.82 Yes 43 69.76 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 61115496 + NM_015533 TKFC 1 0.16 0.11 7 4.26 81.48 28 7.33 Yes 70 0.12 No 0 0 No -27 0.75 Yes 43 71.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53260890 - NR_047580 TKT 1 0.04 0.36 20 -1.25 0 33 6.17 Yes 20 0.57 No 0 0 No -32 0.93 Yes 38 87.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53260894 - NR_047580 TKT 1 0.06 0.46 24 -11.26 0 29 5.85 Yes 16 0.58 No 0 0 No -28 0.93 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 53260920 - NR_047580 TKT 1 0.03 0.29 14 2.74 0 15 4.58 No 45 0.26 No 27 0.9 Yes -17 0.77 Yes 56 30.94 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 53263400 - NR_047580 TKT 1 0.04 0.26 13 4.33 82.85 23 5.2 No 63 2.22 Yes 0 0 No -23 0.51 No 47 48.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 53265561 - NR_047580 TKT 1 0.03 0.21 8 -5.85 0 10 3.87 No 29 1.35 Yes 0 0 No -41 0.95 Yes 29 97.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 53266830 - NR_047580 TKT 1 0.04 0.19 11 6.22 77.54 22 5.2 No 53 0.04 No 0 0 No -20 0.91 Yes 50 92.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 53266856 - NR_047580 TKT 1 0.05 0.25 13 7.57 83.52 40 6.47 Yes 27 0.04 No 0 0 No -25 0.63 No 31 52.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 53274392 - NR_047580 TKT 1 0.04 0.29 16 8.99 87.48 26 5.2 No 13 0.05 No 23 0.95 Yes -23 0.71 Yes 47 58.02 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 53276029 - NR_047580 TKT 1 0.05 0.33 21 6.51 84.6 31 5.82 Yes 49 -2.29 No 0 0 No -30 0.67 Yes 40 54.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 84531254 - NM_020947 TLDC1 1 1.97 0.47 30 7.53 84.78 25 5.09 No 39 1.33 Yes 24 0.66 Yes -24 0.73 Yes 46 50.93 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 84536449 - NM_020947 TLDC1 1 104.02 3.13 66 4.71 84.17 27 5.2 No 17 -1.28 No 0 0 No -24 0.49 No 48 33.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 84536469 - NM_020947 TLDC1 1 42.26 1.36 48 0.6 0 44 8.22 Yes -3 -1.61 No 28 0.71 Yes -28 0.6 No 27 62.64 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 84537754 - NM_020947 TLDC1 1 39.08 0.94 28 9.3 87.28 26 7.55 Yes 13 1.75 Yes 25 0.95 Yes -25 0.9 Yes 45 93.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 70351795 - NM_020908 TLE3 1 0.09 0.14 9 -0.18 0 33 5.99 Yes 20 1.83 Yes 0 0 No -32 0.92 Yes 38 94.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 70356808 - NM_020908 TLE3 1 0.07 0.1 7 -15.73 73.89 80 9.56 Yes 67 2.76 Yes 0 0 No -36 0.82 Yes 34 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 70358552 - NM_020908 TLE3 1 0.16 0.14 8 -7.36 0 14 3.87 No 23 0.52 No 0 0 No -25 0.75 Yes 45 81.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 70358555 - NM_020908 TLE3 1 8.77 7.82 72 0.84 79.38 23 6.2 Yes 20 0.53 No 29 0.9 Yes -22 0.86 Yes 48 85.05 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 82268977 + NM_001282749 TLE4 1 0.6 0.26 15 -1.36 0 71 8.6 Yes 58 1.93 Yes 0 0 No -36 0.82 Yes 34 70.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 82286123 + NM_001282749 TLE4 1 0.34 0.18 11 8.53 86.2 20 4.95 No 7 0.93 Yes 27 0.82 Yes -27 0.73 Yes 43 67.56 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 82322037 + NM_001282749 TLE4 1 0.62 0.29 16 -3.44 0 38 6.28 Yes 36 0.77 Yes 27 0.62 Yes -37 0.71 Yes 33 89.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 82322037 + NM_001282749 TLE4 1 1.82 0.79 38 -3.44 0 38 6.28 Yes 36 0.77 Yes 27 0.62 Yes -37 0.71 Yes 33 89.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 82332911 + NM_001282749 TLE4 1 2.97 1.25 42 5.17 0 19 3.89 No 70 1.61 Yes 18 0.81 Yes -18 0.83 Yes 52 87.5 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 82334459 + NM_001282749 TLE4 1 0.22 0.11 7 5.01 79.14 24 5.05 No 61 0.79 Yes 0 0 No -23 0.61 No 44 67.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 171850456 - NM_012290 TLK1 1 0.75 2.42 64 -5.08 0 14 4.47 No 21 2.08 Yes 0 0 No -40 0.58 No 37 72.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 171862567 - NM_012290 TLK1 1 0.04 0.11 8 8.26 82.91 32 5.39 No 19 0.5 No 0 0 No -32 0.48 No 43 64.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 171871479 - NM_012290 TLK1 1 0.06 0.17 11 -1.78 0 18 4.05 No 42 0.54 No 24 0.75 Yes -50 0.29 No 20 58.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 171877045 - NM_012290 TLK1 1 0.07 0.19 10 10.6 87.82 38 6.39 Yes 66 0.99 Yes 0 0 No -37 0.5 No 33 72.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 171879508 - NM_012290 TLK1 1 0.49 1.4 50 6.97 84.71 26 5.98 Yes 38 0.02 No 0 0 No -25 0.86 Yes 45 87.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 171879640 - NM_012290 TLK1 1 4.7 13.39 72 4.72 74.62 77 11.53 Yes 64 2.03 Yes 27 0.78 Yes -27 0.92 Yes 43 84.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 171879640 - NM_012290 TLK1 1 0.05 0.17 12 4.72 74.62 77 11.53 Yes 64 2.03 Yes 27 0.78 Yes -27 0.92 Yes 43 84.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 171884659 - NM_012290 TLK1 1 0.38 1.08 43 7.01 80.54 27 5 No 33 0.61 No 0 0 No -26 0.89 Yes 44 91.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 171884902 - NM_012290 TLK1 1 0.03 0.1 7 1.79 79.86 19 4.8 No -2 0.21 No 0 0 No -18 0.77 Yes 52 57.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 171906459 - NM_012290 TLK1 1 0.1 0.33 20 -5.12 74.71 26 5.62 Yes 13 0.92 Yes 0 0 No -25 0.87 Yes 45 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 171907277 - NM_012290 TLK1 1 0.11 0.4 20 2.19 79.66 25 5.28 No 3 1.02 Yes 0 0 No -24 0.88 Yes 46 95.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 171913071 - NM_012290 TLK1 1 0.03 0.1 7 1.26 0 13 3 No 18 1.49 Yes 0 0 No -30 0.49 No 40 47.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 171916497 - NM_012290 TLK1 1 0.6 2.07 54 11.65 91.9 30 5.54 No 64 0.51 No 25 0.48 Yes -25 0.31 No 45 59.68 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 171929432 - NM_012290 TLK1 1 0.26 0.78 34 3.79 0 29 6.56 Yes 16 1.46 Yes 0 0 No -28 0.72 Yes 42 91.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 171938219 - NM_012290 TLK1 1 11.42 34.57 72 8.82 87.43 22 3.92 No 13 1.09 Yes 21 0.97 Yes -21 0.92 Yes 49 96.41 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 171948738 - NM_012290 TLK1 1 4.29 11.51 72 7.22 93.74 25 5.48 No 57 1.07 Yes 0 0 No -22 0.53 No 48 69.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 171948738 - NM_012290 TLK1 1 0.04 0.13 7 7.22 93.74 25 5.48 No 57 1.07 Yes 0 0 No -22 0.53 No 48 69.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 171948778 - NM_012290 TLK1 1 0.29 0.76 38 9.17 89.87 30 6.69 Yes 17 1.11 Yes 0 0 No -29 0.72 Yes 41 73.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 171963649 - NM_012290 TLK1 1 0.18 0.47 25 2 68.85 42 6.7 Yes 29 0.67 No 0 0 No -28 0.87 Yes 42 85.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 171973898 - NM_012290 TLK1 1 0.18 0.49 23 5.47 84.41 19 4.79 No 25 0.27 No 0 0 No -19 0.83 Yes 51 57.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 60584741 + NM_001284363 TLK2 1 0.58 0.71 31 11.45 89.13 29 5.62 Yes 57 0.73 No 29 0.85 Yes -28 0.51 No 41 69.67 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 60585768 + NM_001284363 TLK2 1 2.01 2.36 62 8.49 81.36 23 5.6 Yes 62 -3.54 No 22 0.81 Yes -22 0.73 Yes 48 81.38 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 60630047 + NM_001284363 TLK2 1 0.17 0.11 7 11.13 92.09 40 6.73 Yes 40 0.18 No 0 0 No -29 0.88 Yes 41 94.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 60643171 + NM_001284363 TLK2 1 0.14 0.14 8 6.76 82.55 23 5.38 No 59 1.08 Yes 0 0 No -22 0.66 No 48 55.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 60643566 + NM_001284363 TLK2 1 0.13 0.13 9 12.42 90.93 28 6.93 Yes 15 1.11 Yes 0 0 No -27 0.51 No 43 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 60651705 + NM_001284363 TLK2 1 2.26 2.15 58 5.29 84.97 20 4.54 No 56 1.39 Yes 25 0.72 Yes -31 0.41 No 45 59.49 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 60655840 + NM_001284363 TLK2 1 0.12 0.17 11 -5.37 80.89 47 7.18 Yes 34 0.34 No 0 0 No -25 0.66 No 45 57.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 60674580 + NM_001284363 TLK2 1 0.57 0.51 23 10.79 87.44 24 6.08 Yes 11 1.84 Yes 23 0.91 Yes -23 0.86 Yes 47 92.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 35699148 - NM_006289 TLN1 1 0.07 0.21 11 -4.2 0 12 3.87 No 42 1.98 Yes 0 0 No -36 0.87 Yes 34 94.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35699450 - NM_006289 TLN1 1 0.06 0.25 15 0.87 0 12 4.24 No 30 1.31 Yes 0 0 No -42 0.7 Yes 28 81.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35703879 - NM_006289 TLN1 1 0.02 0.1 7 0.08 67.97 11 5.28 No 62 0.68 No 0 0 No -25 0.38 No 45 43.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 35703924 - NM_006289 TLN1 1 0.03 0.13 8 11.88 80.04 30 7.15 Yes 41 1.49 Yes 23 0.65 Yes -29 0.68 Yes 41 81.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 35705845 - NM_006289 TLN1 1 0.08 0.31 17 4.15 0 39 6.56 Yes 26 2.19 Yes 0 0 No -38 0.92 Yes 32 97.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35706355 - NM_006289 TLN1 1 0.05 0.15 9 0.09 0 12 4.24 No 23 2.02 Yes 0 0 No -35 0.7 Yes 35 44.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 35712217 - NM_006289 TLN1 1 0.05 0.17 8 12.08 94.32 35 7.06 Yes 36 1.97 Yes 0 0 No -28 0.69 Yes 42 59.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 35718404 - NM_006289 TLN1 1 6.08 15.63 72 8.58 85.36 28 6.24 Yes 15 1.6 Yes 0 0 No -27 0.71 Yes 43 89.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35720505 - NM_006289 TLN1 1 0.05 0.13 8 -13.98 0 39 8.75 Yes 26 1.3 Yes 0 0 No -39 0.35 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 35720506 - NM_006289 TLN1 1 0.38 1.13 42 -10.8 0 38 8.69 Yes 25 1.3 Yes 0 0 No -38 0.34 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 35722990 - NM_006289 TLN1 1 0.08 0.33 19 8.53 86.21 23 5.08 No 45 0.79 Yes 0 0 No -22 0.43 No 38 47.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 35724029 - NM_006289 TLN1 1 0.04 0.24 12 5.82 78.97 31 5.26 No 18 1.06 Yes 0 0 No -30 0.59 No 40 55.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 35725292 - NM_006289 TLN1 1 0.04 0.14 8 8.5 86.95 22 5.43 No 33 0.87 Yes 0 0 No -29 0.57 No 41 64.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 35725719 - NM_006289 TLN1 1 0.09 0.14 10 -4.54 0 9 3.19 No 8 0.39 No 0 0 No -28 0.83 Yes 42 80.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35726532 - NM_006289 TLN1 1 0.2 0.35 22 9.21 91.9 18 5.83 Yes 5 0.85 Yes 0 0 No -28 0.65 No 42 79.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 35729397 - NM_006289 TLN1 1 0.59 0.94 37 10.64 91.2 33 6.55 Yes 20 2.39 Yes 0 0 No -32 0.6 No 38 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 38800174 - NM_003263 TLR1 1 0.59 0.13 8 7.64 75.24 27 5.29 No 42 0.35 No 0 0 No -26 0.81 Yes 44 84.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 38804046 - NM_003263 TLR1 1 4.49 0.68 37 5.51 90.31 26 5.2 No 13 0.74 No 0 0 No -25 0.97 Yes 45 98.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 38777177 - NM_030956 TLR10 1 1.64 0.54 28 5.03 74.97 27 5.28 No 73 0.86 Yes 26 0.94 Yes -26 0.96 Yes 44 98.17 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 38777177 - NM_030956 TLR10 1 7.74 2.96 58 5.03 74.97 27 5.28 No 73 0.86 Yes 26 0.94 Yes -26 0.96 Yes 44 98.17 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 38777829 - NM_030956 TLR10 1 12.95 4.33 68 3.85 82.6 45 7.44 Yes 69 1.53 Yes 27 0.37 Yes -24 0.83 Yes 46 82.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 38780673 - NM_030956 TLR10 1 6.09 2.17 55 10.85 80.89 19 6.08 Yes 6 1.7 Yes 18 0.7 Yes -18 0.85 Yes 52 91.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 38832329 - NM_006068 TLR6 1 1.51 0.29 17 7.29 97.52 25 4.45 No 59 0.64 No 0 0 No -24 0.83 Yes 46 87.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 38845413 - NM_006068 TLR6 1 2.15 0.47 26 9.85 92.11 27 7.48 Yes 67 1.18 Yes 26 0.5 Yes -24 0.76 Yes 46 86.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 38847540 - NM_006068 TLR6 1 4.86 1.04 41 -2.17 0 26 7.55 Yes 13 1.15 Yes 0 0 No -25 0.83 Yes 45 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 38847544 - NM_006068 TLR6 1 2.84 0.57 28 -6.25 78.04 22 7.28 Yes 9 1.16 Yes 0 0 No -21 0.86 Yes 49 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 38847707 - NM_006068 TLR6 1 7.35 1.75 53 4.74 84.41 39 7.48 Yes 26 1.96 Yes 0 0 No -38 0.83 Yes 32 84.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 12890772 + NM_016562 TLR7 1 0.11 0.14 9 9.99 88.61 34 7.3 Yes 21 0.64 No 0 0 No -28 0.59 No 41 63.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 12895562 + NM_016562 TLR7 1 1.06 1.46 50 7.77 89.15 27 5.26 No 23 0.97 Yes 26 0.83 Yes -26 0.84 Yes 44 81.9 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 52258154 - NM_017442 TLR9 1 1.21 0.36 24 6.33 83.46 29 5.83 Yes 16 0.94 Yes 0 0 No -28 0.79 Yes 42 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52258284 - NM_017442 TLR9 1 1.38 0.21 13 9.42 89.57 38 5.28 No 56 1.34 Yes 23 0.72 Yes -23 0.77 Yes 47 86.2 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 62166023 - NR_135162 TM2D1 1 0.16 0.17 10 4.95 85.62 20 4.82 No 36 1.05 Yes 0 0 No -22 0.57 No 41 39.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 62166038 - NR_135162 TM2D1 1 0.23 0.24 16 5.19 70.68 34 6.89 Yes 21 1.06 Yes 0 0 No -27 0.79 Yes 43 81.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 62175095 - NR_135162 TM2D1 1 0.13 0.14 8 7.01 88.75 18 4.9 No 20 1.41 Yes 21 0.43 Yes -43 0.58 No 27 50.85 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 62186900 - NR_135162 TM2D1 1 0.22 0.22 13 7.97 83.92 31 6.52 Yes 18 1.71 Yes 0 0 No -30 0.94 Yes 40 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 102177138 - NM_001308026 TM2D3 1 2.92 0.24 14 8.54 79.06 40 7.41 Yes 31 1.45 Yes 22 0.29 Yes -26 0.46 No 31 32.9 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 102182848 - NM_001308026 TM2D3 1 1874.63 91.81 72 7.41 81.92 29 6.71 Yes 16 0.97 Yes 28 0.91 Yes -28 0.98 Yes 42 97.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 102187053 - NM_001308026 TM2D3 1 0.32 0.47 26 5.46 73.63 14 5.83 Yes 65 0.66 No 0 0 No -20 0.83 Yes 50 83.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 102190361 - NM_001308026 TM2D3 1 0.75 0.26 15 -3.33 0 28 5.83 Yes 64 0.81 Yes 0 0 No -27 0.7 Yes 43 72.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 102191595 - NM_001308026 TM2D3 1 0.36 0.11 8 9.51 90.77 30 5.48 No 17 1.68 Yes 23 0.87 Yes -23 0.63 No 41 77.22 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 83799487 + NM_001330385 TM6SF1 1 6.05 0.35 17 4.39 77.88 27 6.25 Yes 10 0.73 No 0 0 No -26 0.81 Yes 44 76.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 64880821 + NM_003273 TM7SF2 1 0.2 0.11 8 8.7 87.63 18 9.38 Yes 5 2.15 Yes 21 0.86 Yes -17 0.76 Yes 53 80 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64880840 + NM_003273 TM7SF2 1 2.23 0.99 39 5.63 82.62 28 5.19 No 24 2.31 Yes 21 0.86 Yes -27 0.8 Yes 43 64.3 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 64880821 + NM_003273 TM7SF2 1 0.43 0.25 14 8.7 87.63 18 9.38 Yes 5 2.15 Yes 21 0.86 Yes -17 0.76 Yes 53 80 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64880840 + NM_003273 TM7SF2 1 0.52 0.25 14 5.63 82.62 28 5.19 No 24 2.31 Yes 21 0.86 Yes -27 0.8 Yes 43 64.3 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 64882968 + NM_003273 TM7SF2 1 0.65 0.5 30 1.59 78.28 16 4.69 No 3 0.1 No 0 0 No -15 0.43 No 29 47.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 64883246 + NM_003273 TM7SF2 1 2.38 3.35 66 9.26 84.55 27 5.38 No 73 -2.58 No 27 0.59 Yes -26 0.7 Yes 44 75.81 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 27131028 - NM_016551 TM7SF3 1 0.19 0.43 23 9.44 87.72 18 5.91 Yes 37 0.7 No 23 0.76 Yes -23 0.66 Yes 48 44.05 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 27132852 - NM_016551 TM7SF3 1 0.09 0.14 9 3.12 81.98 17 5.2 No 25 0.51 No 0 0 No -37 0.46 No 25 59.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27133565 - NM_016551 TM7SF3 1 1.63 6.29 68 4.46 86.95 18 4.89 No 56 1.34 Yes 27 0.9 Yes -17 0.48 No 53 76.28 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 27133565 - NM_016551 TM7SF3 1 0.06 0.24 13 4.46 86.95 18 4.89 No 56 1.34 Yes 27 0.9 Yes -17 0.48 No 53 76.28 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 27135789 - NM_016551 TM7SF3 1 0.37 1.4 48 -3.74 0 24 7.61 Yes 11 1.15 Yes 0 0 No -23 0.52 No 39 51.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 27136530 - NM_016551 TM7SF3 1 0.9 3.25 65 7.54 90.13 35 4.74 No 0 0.06 No 0 0 No -21 0.56 No 49 83.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 27136530 - NM_016551 TM7SF3 1 0.07 0.25 16 7.54 90.13 35 4.74 No 0 0.06 No 0 0 No -21 0.56 No 49 83.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 27148340 - NM_016551 TM7SF3 1 0.07 0.18 12 -1.4 75.68 30 6.48 Yes 17 1.69 Yes 0 0 No -29 0.86 Yes 41 91.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27148394 - NM_016551 TM7SF3 1 0.23 0.67 33 9.22 83.85 30 5.5 No 37 0.47 No 0 0 No -29 0.65 No 41 59.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 27151881 - NM_016551 TM7SF3 1 0.09 0.25 13 0.6 81.24 23 4.69 No 10 0.57 No 0 0 No -22 0.7 Yes 47 75.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 27152582 - NM_016551 TM7SF3 1 0.66 2.19 61 4.13 79.45 16 6.03 Yes 69 0.82 Yes 30 0.49 Yes -30 0.73 Yes 40 79.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 27152582 - NM_016551 TM7SF3 1 0.3 0.89 34 4.13 79.45 16 6.03 Yes 69 0.82 Yes 30 0.49 Yes -30 0.73 Yes 40 79.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 27152700 - NM_016551 TM7SF3 1 1.89 5.9 72 4.13 76.85 35 5.27 No 23 -0.92 No 34 0.55 Yes -35 0.88 Yes 35 95.39 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 27156199 - NM_016551 TM7SF3 1 0.09 0.18 10 3.42 69.16 31 6.73 Yes 18 1.15 Yes 0 0 No -30 0.74 Yes 40 73.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 27156339 - NM_016551 TM7SF3 1 0.22 0.4 20 -0.25 58.32 18 4.87 No 57 0.32 No 25 0.42 Yes -57 0.43 No 61 39.4 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 27164072 - NM_016551 TM7SF3 1 0.1 0.15 9 10.81 85.41 36 6.84 Yes 23 1.3 Yes 0 0 No -35 0.63 No 35 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 27165762 - NM_016551 TM7SF3 1 0.21 0.29 20 2.13 0 27 5.33 No 76 0.01 No 0 0 No -22 0.65 No 48 71.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 27165767 - NM_016551 TM7SF3 1 0.17 0.32 16 3.56 85.02 22 4.85 No 71 0.02 No 0 0 No -21 0.58 No 49 69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 24659798 - NM_001014842 TM9SF1 1 0.65 0.43 27 1.76 77.59 34 5.26 No 21 -1.47 No 28 0.86 Yes -28 0.71 Yes 42 73.85 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 24664037 - NM_001014842 TM9SF1 1 1.49 0.94 38 0.91 71.58 30 5.44 No 17 0.87 Yes 23 0.87 Yes -23 0.49 No 41 37.08 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 24664258 - NM_001014842 TM9SF1 1 2.47 1.38 48 6.46 87.17 42 7.43 Yes 13 1.83 Yes 25 0.84 Yes -26 0.81 Yes 29 62.48 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 100170390 + NM_004800 TM9SF2 1 0.04 0.15 10 2.51 0 37 5.93 Yes 24 0.58 No 0 0 No -27 0.72 Yes 43 76.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 100181721 + NM_004800 TM9SF2 1 0.05 0.19 12 -14.59 0 31 8.52 Yes 18 1.15 Yes 0 0 No -30 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 100199216 + NM_004800 TM9SF2 1 0.09 0.4 25 -2.55 67 14 4.87 No -2 0.21 No 24 0.6 Yes -10 0.24 No 60 31.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 98285495 - NM_020123 TM9SF3 1 0.06 0.24 17 7.18 84.41 21 5.66 Yes 8 1.54 Yes 0 0 No -20 0.63 No 50 78.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 98287303 - NM_020123 TM9SF3 1 1.83 7.83 72 8.03 75.95 30 6.6 Yes 17 0.4 No 29 0.63 Yes -29 0.69 Yes 41 77.39 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 98288179 - NM_020123 TM9SF3 1 0.07 0.29 19 5.38 88.76 20 5 No 7 0.36 No 0 0 No -23 0.53 No 43 33.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 98303980 - NM_020123 TM9SF3 1 0.17 0.61 30 4.52 72.27 25 5.1 No 51 0.51 No 20 0.77 Yes -24 0.81 Yes 46 78.88 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 98312485 - NM_020123 TM9SF3 1 0.25 1.29 52 8.36 98.16 19 6.81 Yes 0 0.65 No 0 0 No -26 0.41 No 44 63.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 98320461 - NM_020123 TM9SF3 1 0.27 1.06 45 5.93 82.88 20 5.97 Yes 56 1.13 Yes 0 0 No -33 0.81 Yes 37 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 98321913 - NM_020123 TM9SF3 1 0.16 0.56 31 2.19 70.06 23 3.92 No 10 0.31 No 23 0.54 Yes -22 0.62 No 48 67.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 30719637 + NM_014742 TM9SF4 1 0.9 0.49 26 8.62 92.01 29 6.48 Yes 45 0.17 No 0 0 No -29 0.79 Yes 41 68.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 30729343 + NM_014742 TM9SF4 1 0.19 0.21 15 6.9 86.61 16 4.03 No 58 0.94 Yes 33 0.57 Yes -33 0.53 No 37 73.6 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 30724679 + NM_014742 TM9SF4 1 0.79 0.85 39 9.75 84.08 28 4.46 No 29 1.31 Yes 27 0.91 Yes -27 0.88 Yes 43 94.13 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 30729260 + NM_014742 TM9SF4 1 0.17 0.18 11 -3.21 0 17 4.24 No 4 1.02 Yes 26 0.88 Yes -16 0.83 Yes 54 67.12 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 30729343 + NM_014742 TM9SF4 1 3.9 4.39 69 6.9 86.61 16 4.03 No 58 0.94 Yes 33 0.57 Yes -33 0.53 No 37 73.6 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 30737250 + NM_014742 TM9SF4 1 0.15 0.18 11 8.15 86.28 29 5.42 No 69 -2.16 No 0 0 No -29 0.68 Yes 41 86.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30737328 + NM_014742 TM9SF4 1 0.12 0.14 9 4.46 78.61 36 5.11 No 3 1.05 Yes 0 0 No -32 0.36 No 38 70.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 30737440 + NM_014742 TM9SF4 1 0.13 0.15 10 -5.71 0 25 5.95 Yes 12 1.52 Yes 0 0 No -24 0.91 Yes 46 71.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30741997 + NM_014742 TM9SF4 1 0.2 0.25 16 4.37 84.95 27 5.2 No 46 0.4 No 0 0 No -26 0.6 No 44 75.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 30742854 + NM_014742 TM9SF4 1 0.83 0.94 41 4.64 72.1 35 4.31 No 50 -1.77 No 0 0 No -34 0.9 Yes 36 73.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30745692 + NM_014742 TM9SF4 1 0.87 1.06 45 1 69.82 101 9.82 Yes NA NA NA 0 0 No -32 0.52 No 19 21.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 30747058 + NM_014742 TM9SF4 1 0.2 0.22 12 4.21 83.83 24 4.24 No 51 0.69 No 0 0 No -23 0.86 Yes 47 86.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30747880 + NM_014742 TM9SF4 1 0.09 0.1 7 2.11 71.96 62 8.73 Yes 49 1.12 Yes 0 0 No -32 0.88 Yes 38 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30754775 + NM_014742 TM9SF4 1 1.79 2.67 59 8.5 84.6 24 5.6 Yes 63 1.75 Yes 0 0 No -32 0.43 No 40 32.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 164417794 + NM_018352 TMA16 1 0.33 0.54 33 6.24 90.92 28 5.83 Yes 76 0.95 Yes 0 0 No -27 0.67 Yes 43 46.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 164433207 + NM_018352 TMA16 1 0.46 0.9 38 8.05 88.46 19 6.16 Yes 6 1.17 Yes 0 0 No -28 0.65 No 42 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 164438587 + NM_018352 TMA16 1 0.16 0.31 16 -1.1 80.5 30 4.15 No 17 0.69 No 0 0 No -29 0.94 Yes 41 97.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 164438594 + NM_018352 TMA16 1 0.15 0.22 14 -7.25 0 12 4 No 24 0.69 No 0 0 No -36 0.93 Yes 34 98.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48481954 + NM_015933 TMA7 1 3.18 37.78 72 0.76 0 27 4.56 No 19 0.47 No 0 0 No -26 0.46 No 45 52.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 48485261 + NM_015933 TMA7 1 0.04 1 39 3.68 0 16 3.64 No 18 1.27 Yes 0 0 No -30 0.82 Yes 40 89.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219142716 - NM_001321430 TMBIM1 1 0.08 0.13 7 -1.11 74.07 12 3.31 No 71 -1.23 No 24 0.95 Yes -25 0.3 No 59 38.86 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 219142842 - NM_001321430 TMBIM1 1 0.09 0.15 8 5.65 73.87 39 7.37 Yes 26 0.25 No 0 0 No -38 0.96 Yes 32 94.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 66531933 - NM_001282606 TMBIM4 1 0.09 0.18 11 4.57 85.86 19 4.8 No 17 0.82 Yes 0 0 No -43 0.34 No 40 30.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 66531933 - NM_001282606 TMBIM4 1 0.21 0.44 26 4.57 85.86 19 4.8 No 17 0.82 Yes 0 0 No -43 0.34 No 40 30.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 66531946 - NM_001282606 TMBIM4 1 1.15 2.47 61 -11.28 0 31 5.51 No 4 0.85 Yes 0 0 No -30 0.31 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 66532515 - NM_001282606 TMBIM4 1 3.38 5.32 72 4.78 84.57 40 6.63 Yes 40 0.6 No 0 0 No -39 0.81 Yes 31 76.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 66532664 - NM_001282606 TMBIM4 1 0.28 0.44 21 6.34 81.13 31 6.71 Yes 73 0.12 No 0 0 No -30 0.95 Yes 40 94.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 50152134 + NM_001098576 TMBIM6 1 0.02 0.31 17 2.65 72.77 23 4.9 No 61 1.35 Yes 22 0.93 Yes -22 0.7 Yes 48 72.79 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 50152441 + NM_001098576 TMBIM6 1 0.01 0.17 8 3.25 77.41 37 6.35 Yes 59 1.59 Yes 27 0.84 Yes -36 0.7 Yes 47 57.42 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 76109167 - NM_007267 TMC6 1 0.09 0.25 12 7.16 84.7 23 5.38 No 10 0.73 No 0 0 No -22 0.78 Yes 48 75.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76109312 - NM_007267 TMC6 1 0.07 0.18 10 5.55 73.79 22 6.1 Yes 9 1.12 Yes 21 0.87 Yes -21 0.84 Yes 49 80.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 76112233 - NM_007267 TMC6 1 0.08 0.21 12 2.8 69.9 34 6.77 Yes 21 1.12 Yes 0 0 No -27 0.61 No 37 51.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76113404 - NM_007267 TMC6 1 0.17 0.33 17 7.49 79.41 19 5.83 Yes 6 -0.37 No 0 0 No -18 0.52 No 52 63.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76113719 - NM_007267 TMC6 1 0.24 0.49 16 -5.59 0 10 4 No 39 0.57 No 0 0 No -34 0.8 Yes 36 65.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 76113719 - NM_007267 TMC6 1 0.13 0.22 12 -5.59 0 10 4 No 39 0.57 No 0 0 No -34 0.8 Yes 36 65.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 76113738 - NM_007267 TMC6 1 0.12 0.22 9 -9.51 0 16 4.69 No 20 0.56 No 27 0.82 Yes -15 0.24 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 76113993 - NM_007267 TMC6 1 0.17 0.39 20 3.07 74.62 29 5.29 No 54 -0.93 No 0 0 No -24 0.56 No 42 45.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76114085 - NM_007267 TMC6 1 0.06 0.1 7 -0.88 74.63 16 5.27 No 57 -3.34 No 0 0 No -26 0.54 No 42 62.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76114857 - NM_007267 TMC6 1 0.07 0.18 10 5.13 86.1 30 6.86 Yes 17 1.4 Yes 0 0 No -29 0.87 Yes 41 91.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76115478 - NM_007267 TMC6 1 0.63 1.44 54 -6.05 68.2 55 7.38 Yes 42 0.55 No 24 0.92 Yes -20 0.87 Yes 50 76.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 76115478 - NM_007267 TMC6 1 0.09 0.18 11 -6.05 68.2 55 7.38 Yes 42 0.55 No 24 0.92 Yes -20 0.87 Yes 50 76.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 76120220 - NM_007267 TMC6 1 0.11 0.22 13 -0.74 73.07 33 7.03 Yes 54 1.5 Yes 0 0 No -32 0.58 No 38 63.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76120737 - NM_007267 TMC6 1 5.37 8.06 72 6.06 79.58 18 6.05 Yes 66 -1 No 0 0 No -30 0.9 Yes 40 85.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76120737 - NM_007267 TMC6 1 5.26 7.58 72 6.06 79.58 18 6.05 Yes 66 -1 No 0 0 No -30 0.9 Yes 40 85.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76120821 - NM_007267 TMC6 1 0.92 1.33 51 10.56 89.99 16 4.42 No 61 1.24 Yes 0 0 No -35 0.4 No 35 61.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76120821 - NM_007267 TMC6 1 0.5 0.69 35 10.56 89.99 16 4.42 No 61 1.24 Yes 0 0 No -35 0.4 No 35 61.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76120886 - NM_007267 TMC6 1 0.28 0.4 17 9.5 80.9 27 5.74 Yes 14 1.03 Yes 25 0.9 Yes -26 0.87 Yes 44 81.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 76121916 - NM_007267 TMC6 1 0.17 0.38 23 1.16 66.41 31 5.48 No 18 -1.99 No 0 0 No -26 0.34 No 33 23.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76121937 - NM_007267 TMC6 1 0.42 0.92 38 5.01 80.77 20 5.05 No 71 -1.96 No 0 0 No -24 0.7 Yes 46 74.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76121959 - NM_007267 TMC6 1 0.07 0.14 7 -1.34 0 12 4 No 60 -2.49 No 0 0 No -24 0.72 Yes 59 39.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 76121978 - NM_007267 TMC6 1 0.26 0.6 26 4.49 72.7 21 6.32 Yes 63 -4.9 No 27 0.18 Yes -20 0.68 Yes 28 50.23 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 76122441 - NM_007267 TMC6 1 0.11 0.21 14 -6.62 0 16 4 No 14 0.8 Yes 0 0 No -26 0.86 Yes 44 93.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76122444 - NM_007267 TMC6 1 0.06 0.11 7 -4.67 0 24 5.48 No 11 0.79 Yes 0 0 No -23 0.88 Yes 47 93.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76122678 - NM_007267 TMC6 1 0.36 0.89 41 4.24 81.49 30 5.38 No 65 2.28 Yes 23 0.52 Yes -29 0.43 No 53 36.75 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 76122681 - NM_007267 TMC6 1 0.97 2.4 64 0.84 78.89 27 5.1 No 62 2.27 Yes 23 0.52 Yes -26 0.56 No 50 31.27 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 76122726 - NM_007267 TMC6 1 0.12 0.33 20 1.93 0 30 6.48 Yes 17 2.3 Yes 0 0 No -29 0.85 Yes 41 75.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76127966 + NM_152468 TMC8 1 1.44 0.61 33 2.22 0 39 6.36 Yes 26 0.96 Yes 0 0 No -34 0.81 Yes 36 86.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76128260 + NM_152468 TMC8 1 0.41 0.24 14 12.72 87.94 38 7.5 Yes 43 0.83 Yes 0 0 No -37 0.74 Yes 33 88.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76128260 + NM_152468 TMC8 1 0.2 0.14 10 12.72 87.94 38 7.5 Yes 43 0.83 Yes 0 0 No -37 0.74 Yes 33 88.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76129173 + NM_152468 TMC8 1 0.6 0.58 28 7.19 77.25 26 6.16 Yes 50 -4.94 No 0 0 No -25 0.95 Yes 45 95.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76130036 + NM_152468 TMC8 1 0.44 0.33 19 7.63 76.08 46 6.53 Yes 13 0.81 Yes 0 0 No -25 0.92 Yes 45 93.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76130446 + NM_152468 TMC8 1 0.35 0.42 25 9.29 77.8 47 7.14 Yes 44 0.92 Yes 30 0.76 Yes -32 0.51 No 38 64.29 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 76131560 + NM_152468 TMC8 1 0.13 0.11 7 5.53 81.54 15 4.91 No 50 -4.65 No 0 0 No -25 0.32 No 56 25.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76132601 + NM_152468 TMC8 1 0.08 0.1 7 4.58 74.78 28 5.99 Yes 1 0.86 Yes 0 0 No -25 0.48 No 45 74.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 76132700 + NM_152468 TMC8 1 3.97 3.86 68 6.85 78.71 22 5.26 No 29 -3.21 No 21 0.85 Yes -21 0.8 Yes 49 81.79 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 76134501 + NM_152468 TMC8 1 0.92 1.56 51 8.87 89.38 16 5.26 No 48 -0.08 No 0 0 No -21 0.8 Yes 49 89.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76134630 + NM_152468 TMC8 1 2.1 3.56 66 -1.46 67.64 21 4.8 No 8 0.21 No 20 0.97 Yes -20 0.96 Yes 50 88.78 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 76136917 + NM_152468 TMC8 1 4.2 3.43 66 7.1 87.85 28 6.73 Yes 47 1.35 Yes 25 0.84 Yes -28 0.79 Yes 42 75.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 129546921 - NM_001017395 TMCC1 1 8.31 1.33 52 9.48 75.52 25 5.76 Yes 12 0.94 Yes 24 0.94 Yes -24 0.8 Yes 46 76.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 129546921 - NM_001017395 TMCC1 1 0.98 0.18 7 9.48 75.52 25 5.76 Yes 12 0.94 Yes 24 0.94 Yes -24 0.8 Yes 46 76.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 129547348 - NM_001017395 TMCC1 1 9.92 1.69 54 -0.43 0 53 7.18 Yes 40 0.56 No 0 0 No -48 0.58 No 22 69.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 129557904 - NM_001017395 TMCC1 1 12.57 1.42 49 8.52 84.12 28 5.12 No 38 1.25 Yes 0 0 No -50 0.3 No 20 30.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 129567256 - NM_001017395 TMCC1 1 169.52 20.03 72 9.45 86.59 15 6.04 Yes 2 1.05 Yes 29 0.71 Yes -29 0.68 Yes 41 67.38 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 129570993 - NM_001017395 TMCC1 1 0.93 0.1 7 10.62 94.82 26 7 Yes 13 1.27 Yes 0 0 No -25 0.91 Yes 45 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 129579856 - NM_001017395 TMCC1 1 48.88 5.42 72 6.62 70.62 36 6.78 Yes 23 1.63 Yes 35 0.68 Yes -35 0.85 Yes 35 91.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 129580115 - NM_001017395 TMCC1 1 2.24 0.32 21 2.24 80.12 21 5.66 Yes 8 0.75 No 0 0 No -20 0.47 No 50 64.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 129580118 - NM_001017395 TMCC1 1 1.86 0.21 12 4.04 85.02 18 5.39 No 5 0.78 Yes 0 0 No -26 0.42 No 44 61.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 129580279 - NM_001017395 TMCC1 1 3.51 0.49 23 3.28 82.47 32 5.42 No 16 1.14 Yes 0 0 No -28 0.44 No 39 51.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 129585942 - NM_001017395 TMCC1 1 11.67 1.47 51 10.29 88.62 31 5.74 Yes -4 0.38 No 28 0.4 Yes -30 0.74 Yes 40 64.33 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 129623863 + NR_037893 TMCC1-AS1 1 1.09 0.18 11 9.82 93.05 42 6.48 Yes 45 0.72 No 27 0.68 Yes -27 0.51 No 43 42.62 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 129624446 + NR_037893 TMCC1-AS1 1 2.04 0.36 24 -2.13 59.72 15 5.05 No -1 0.1 No 25 0.54 Yes -12 0.38 No 59 40.33 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 94966834 - NM_020698 TMCC3 1 0.44 0.18 11 5.35 75.92 30 5.91 Yes 47 -2.68 No 0 0 No -22 0.64 No 48 66.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 94969720 - NM_020698 TMCC3 1 0.73 0.21 13 7.94 78.95 34 6.08 Yes 60 -3.2 No 0 0 No -28 0.46 No 42 45.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 165699755 - NM_001256165 TMCO1 1 0.04 0.18 12 10.59 87.58 31 7.13 Yes 18 1.89 Yes 0 0 No -30 0.77 Yes 40 91.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 165703092 - NM_001256165 TMCO1 1 0.04 0.24 12 12.53 97.96 24 6.16 Yes 50 -1.89 No 0 0 No -24 0.23 No 44 60.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 165712493 - NM_001256165 TMCO1 1 0.18 0.99 41 7.31 82 23 6.3 Yes 73 0.7 No 0 0 No -28 0.65 No 35 83.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 165712493 - NM_001256165 TMCO1 1 0.05 0.31 17 7.31 82 23 6.3 Yes 73 0.7 No 0 0 No -28 0.65 No 35 83.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 165724228 - NM_001256165 TMCO1 1 0.16 0.54 26 10.04 95.2 38 6.4 Yes 47 0.71 No 34 0.19 Yes -34 0.45 No 36 50.12 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 114156330 + NM_017905 TMCO3 1 0.16 0.13 8 6.78 0 17 4.54 No 62 -4.1 No 0 0 No -21 0.45 No 49 57.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 114159740 + NM_017905 TMCO3 1 0.89 0.67 31 3.53 71.43 17 4.41 No 12 0.93 Yes 0 0 No -24 0.87 Yes 46 83.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114164855 + NM_017905 TMCO3 1 2.3 1.51 52 8.5 84.65 15 5.17 No 72 1.29 Yes 0 0 No -22 0.84 Yes 48 84.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114170357 + NM_017905 TMCO3 1 2.2 1.49 56 9.12 93.1 18 5.31 No 0 0.82 Yes 0 0 No -27 0.88 Yes 43 87.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114173849 + NM_017905 TMCO3 1 0.64 0.43 24 11.12 94.25 22 5.34 No 9 1.05 Yes 0 0 No -21 0.95 Yes 49 93.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114185655 + NM_017905 TMCO3 1 1.07 0.51 28 9.44 86.47 32 5.66 Yes 0 1.79 Yes 0 0 No -31 0.86 Yes 39 91.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114188450 + NM_017905 TMCO3 1 0.51 0.26 15 3 75.74 38 6.4 Yes 45 0.08 No 0 0 No -37 0.77 Yes 36 74.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 114193074 + NM_017905 TMCO3 1 0.52 0.28 15 6.5 83.55 16 4.85 No 40 1.6 Yes 0 0 No -21 0.73 Yes 49 92.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114193074 + NM_017905 TMCO3 1 0.85 0.42 20 6.5 83.55 16 4.85 No 40 1.6 Yes 0 0 No -21 0.73 Yes 49 92.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114195695 + NM_017905 TMCO3 1 0.82 0.28 15 6.21 84.33 29 8.01 Yes 16 0.91 Yes 0 0 No -28 0.72 Yes 42 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 114202168 + NM_017905 TMCO3 1 0.21 0.1 7 6.01 84.37 24 5.09 No 11 0.97 Yes 0 0 No -19 0.68 Yes 47 75.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 20009933 - NM_181719 TMCO4 1 0.48 0.18 11 -1.05 0 24 6.63 Yes 11 1.69 Yes 0 0 No -23 0.91 Yes 47 93.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 20013314 - NM_181719 TMCO4 1 0.91 0.33 21 9.58 89.15 16 4.69 No 3 1.14 Yes 0 0 No -24 0.85 Yes 46 83.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 20053792 - NM_181719 TMCO4 1 0.29 0.11 7 9.75 92.29 31 4.4 No 6 1.03 Yes 0 0 No -18 0.74 Yes 52 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 20070220 - NM_181719 TMCO4 1 0.85 0.22 13 7.5 86.15 28 5.56 Yes 36 0.82 Yes 0 0 No -27 0.9 Yes 43 90.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 20076866 - NM_181719 TMCO4 1 1.94 0.83 34 6.84 77.73 31 5.17 No 18 0.64 No 25 0.81 Yes -25 0.81 Yes 45 78.54 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 20082262 - NM_181719 TMCO4 1 0.41 0.18 9 -0.48 0 31 8.43 Yes 45 1.73 Yes 32 0.65 Yes -30 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 20082269 - NM_181719 TMCO4 1 0.25 0.11 7 0.52 0 24 7.49 Yes 38 1.74 Yes 32 0.65 Yes -23 0.59 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 20097389 - NM_181719 TMCO4 1 0.3 0.13 9 6.14 84.34 22 5.29 No 32 1.48 Yes 0 0 No -21 0.74 Yes 49 80.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 20098667 - NM_181719 TMCO4 1 0.38 0.11 8 7.64 78.27 20 7.51 Yes 7 1.4 Yes 0 0 No -24 0.45 No 51 46.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 20105012 - NM_181719 TMCO4 1 1.2 0.39 23 5.69 83.62 29 6 Yes 16 1.14 Yes 0 0 No -28 0.96 Yes 42 96.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 20111973 - NM_181719 TMCO4 1 7.88 2.74 61 3.63 75.83 23 5.18 No 62 0.5 No 0 0 No -26 0.62 No 44 67.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 20113966 - NM_181719 TMCO4 1 1.13 0.14 10 5.6 72.44 21 5.2 No 18 1.5 Yes 0 0 No -20 0.69 Yes 40 55.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 20116542 - NM_181719 TMCO4 1 10.44 1.06 47 3.26 0 40 6.49 Yes 27 0.75 No 0 0 No -39 0.84 Yes 31 79.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 20116542 - NM_181719 TMCO4 1 6.3 0.65 32 3.26 0 40 6.49 Yes 27 0.75 No 0 0 No -39 0.84 Yes 31 79.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 20118320 - NM_181719 TMCO4 1 1.21 0.15 11 6.4 82.06 18 5.98 Yes 72 -3.62 No 0 0 No -20 0.46 No 50 57.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 20120142 - NM_181719 TMCO4 1 19.27 1.99 59 9.59 86.34 34 5.84 Yes 51 0.1 No 0 0 No -28 0.71 Yes 45 69.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 20120142 - NM_181719 TMCO4 1 6.29 0.67 34 9.59 86.34 34 5.84 Yes 51 0.1 No 0 0 No -28 0.71 Yes 45 69.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 140022075 + NM_001300980 TMCO6 1 0.64 0.17 11 4.36 78.93 69 8.94 Yes 56 1.5 Yes 24 0.59 Yes -22 0.56 No 48 76.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 140022075 + NM_001300980 TMCO6 1 0.95 0.21 11 4.36 78.93 69 8.94 Yes 56 1.5 Yes 24 0.59 Yes -22 0.56 No 48 76.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 140023152 + NM_001300980 TMCO6 1 2.06 0.42 23 3.99 0 32 6.16 Yes 30 0.1 No 0 0 No -31 0.48 No 39 77.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 140023487 + NM_001300980 TMCO6 1 2.69 0.64 32 8.36 87.96 17 5.31 No 4 0.13 No 0 0 No -22 0.72 Yes 48 89.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 140023499 + NM_001300980 TMCO6 1 1.55 0.33 17 6.8 0 16 3.96 No 16 0.1 No 0 0 No -24 0.87 Yes 46 95.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 140024185 + NM_001300980 TMCO6 1 1.3 0.24 12 5.42 74.03 23 5.2 No 63 0.71 No 0 0 No -22 0.96 Yes 48 98.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75601647 - NM_006827 TMED10 1 0.21 1.22 49 4.46 66.98 35 4.67 No 11 0.09 No 0 0 No -34 0.83 Yes 36 92.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75605875 - NM_006827 TMED10 1 0.07 0.43 22 -1.65 65.75 32 4.68 No 37 -1.76 No 31 0.52 Yes -35 0.67 Yes 35 70.02 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 75614435 - NM_006827 TMED10 1 0.16 0.94 41 0.81 0 9 3.87 No 16 1.07 Yes 0 0 No -36 0.73 Yes 34 76.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75614477 - NM_006827 TMED10 1 0.07 0.42 24 -3.3 0 19 4.24 No 52 -4.09 No 24 0.23 Yes -18 0.56 No 52 24.56 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 124081199 + NM_001321445 TMED2 1 0.01 0.13 7 7.97 77.18 20 5.74 Yes 66 0.66 No 0 0 No -28 0.62 No 42 65.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 124078702 + NM_001321445 TMED2 1 0.15 1.5 47 2.96 84.41 27 5.39 No 55 0.83 Yes 0 0 No -24 0.88 Yes 46 95.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 124081113 + NM_001321445 TMED2 1 0.01 0.18 10 -1.48 74.82 35 6.59 Yes 11 0.91 Yes 30 0.51 Yes -26 0.93 Yes 44 89.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 44621183 - NM_001303058 TMED4 1 0.23 0.35 19 -2.32 0 23 5.27 No -4 0.26 No 31 0.44 Yes -23 0.67 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 44621406 - NM_001303058 TMED4 1 0.11 0.17 10 2.22 76.06 15 5.1 No 25 0.76 No 20 0.84 Yes -37 0.8 Yes 33 86.23 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 93621642 - NM_016040 TMED5 1 3.6 14.26 72 8.48 89.32 14 5.64 Yes 1 1.01 Yes 27 0.77 Yes -27 0.56 No 45 74.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 93624443 - NM_016040 TMED5 1 5.02 13.82 72 9.85 87.78 20 6.69 Yes 7 1.36 Yes 19 0.7 Yes -19 0.68 Yes 51 68.19 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 93628127 - NM_016040 TMED5 1 0.06 0.13 9 5.98 92.71 31 4.34 No 6 1.63 Yes 0 0 No -18 0.75 Yes 52 76.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 93632604 - NM_016040 TMED5 1 0.17 0.36 21 6.84 81.31 25 4.93 No 6 0.78 Yes 0 0 No -24 0.91 Yes 46 97.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 77808857 - NM_213601 TMED8 1 0.14 0.15 11 8.03 79.28 17 5.48 No 4 1.18 Yes 0 0 No -31 0.46 No 39 66.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 77810182 - NM_213601 TMED8 1 1.61 1.5 51 3.54 79.62 36 6.24 Yes 23 0.03 No 20 0.9 Yes -35 0.81 Yes 35 87.39 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 77812815 - NM_213601 TMED8 1 2.56 1.88 51 -5.99 0 12 4 No 17 0.95 Yes 0 0 No -29 0.79 Yes 41 89.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 77812824 - NM_213601 TMED8 1 5.52 4.07 68 -4.66 77.77 21 6.3 Yes 8 0.96 Yes 0 0 No -20 0.76 Yes 50 87.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 77817409 - NM_213601 TMED8 1 0.47 0.33 18 8.18 81.65 74 4.93 No 54 0.96 Yes 0 0 No -21 0.61 No 49 60.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 77818093 - NM_213601 TMED8 1 1.26 0.72 32 0.19 75.25 29 6.47 Yes 16 0.52 No 0 0 No -28 0.75 Yes 42 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 77840202 - NM_213601 TMED8 1 0.21 0.13 7 4.48 76.24 17 5.48 No 63 -3.02 No 0 0 No -27 0.46 No 45 42.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 177021141 + NM_017510 TMED9 1 0.02 0.15 9 -4.44 75.49 24 6.4 Yes 11 0.72 No 0 0 No -23 0.87 Yes 47 85.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 177021160 + NM_017510 TMED9 1 0.03 0.21 14 1.89 76.41 24 4.71 No 30 0.7 No 0 0 No -23 0.66 No 28 65.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 177022244 + NM_017510 TMED9 1 0.09 0.68 18 -5.9 0 12 4.24 No 46 1.67 Yes 25 0.91 Yes -58 0.64 No 12 34.1 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 42090468 - NM_001304813 TMEM101 1 0.23 0.15 11 4.28 77.94 27 6.56 Yes 70 0.85 Yes 0 0 No -26 0.71 Yes 44 78.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 72773405 + NM_001321264 TMEM104 1 0.46 0.13 8 -11.32 74.38 26 5.57 Yes 13 0.38 No 22 0.78 Yes -25 0.49 No 45 69.25 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 72773716 + NM_001321264 TMEM104 1 2.64 0.65 30 9.28 85.37 25 3.58 No 12 0.25 No 24 0.91 Yes -24 0.66 No 46 67.12 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 72776207 + NM_001321264 TMEM104 1 0.5 0.11 8 2.65 74.29 29 5.83 Yes 16 0.36 No 0 0 No -28 0.89 Yes 42 73.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 72791665 + NM_001321264 TMEM104 1 3.99 1.47 44 6.17 86.11 35 6.4 Yes 22 1.34 Yes 0 0 No -34 0.8 Yes 36 89.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 72794400 + NM_001321264 TMEM104 1 1.4 0.46 25 7.47 80.16 22 6 Yes 71 1.21 Yes 0 0 No -29 0.68 Yes 41 57.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 72807061 + NM_001321264 TMEM104 1 0.43 0.14 9 10.41 90.79 30 7.55 Yes 17 1.81 Yes 0 0 No -29 0.93 Yes 41 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41364819 + NM_001291586 TMEM106A 1 1.27 0.33 18 11.4 88.22 34 6.55 Yes 21 1.61 Yes 0 0 No -33 0.72 Yes 37 80.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41364819 + NM_001291586 TMEM106A 1 1.59 0.39 21 11.4 88.22 34 6.55 Yes 21 1.61 Yes 0 0 No -33 0.72 Yes 37 80.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41365133 + NM_001291586 TMEM106A 1 10.27 2.38 63 4.85 71.87 31 4.03 No 54 0.34 No 28 0.4 Yes -28 0.65 No 45 50.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 41365208 + NM_001291586 TMEM106A 1 0.35 0.1 7 6.84 77.46 31 6.08 Yes 43 -1.22 No 31 0.34 Yes -34 0.91 Yes 36 90.48 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 41366009 + NM_001291586 TMEM106A 1 0.35 0.14 9 6.38 81.25 26 7.4 Yes 13 0.95 Yes 0 0 No -25 0.88 Yes 45 90.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41369669 + NM_001291586 TMEM106A 1 0.69 0.35 21 6.92 88.13 23 5.2 No 18 0.25 No 23 0.91 Yes -20 0.5 No 50 49.48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 41370988 + NM_001291586 TMEM106A 1 0.37 0.14 9 6.97 82.22 27 4.45 No 74 1.47 Yes 0 0 No -27 0.71 Yes 43 90.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 12255046 + NM_018374 TMEM106B 1 0.29 0.29 11 8.03 85.05 25 4.75 No 12 2.08 Yes 0 0 No -24 0.63 No 46 75.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 12263371 + NM_018374 TMEM106B 1 1.71 1.18 39 7.89 95.08 29 7.14 Yes 16 0.97 Yes 0 0 No -28 0.88 Yes 42 86.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 48361923 + NM_001143842 TMEM106C 1 0.07 0.18 10 -1.05 0 11 4.12 No 22 0.99 Yes 0 0 No -34 0.77 Yes 36 83.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8079194 - NM_183065 TMEM107 1 12.19 2.08 56 -6.54 0 21 4.47 No 72 -5.03 No 26 0.75 Yes -26 0.5 No 50 24.26 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 8079205 - NM_183065 TMEM107 1 0.83 0.14 8 -5.07 0 10 3.61 No 76 -5.32 No 26 0.75 Yes -15 0.73 Yes 17 31.97 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 8079340 - NM_183065 TMEM107 1 3.43 0.69 31 1.31 0 33 7.42 Yes 20 0.8 Yes 0 0 No -32 0.89 Yes 38 88.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8079399 - NM_183065 TMEM107 1 0.66 0.15 9 10.53 81.63 37 7.14 Yes 62 1.18 Yes 0 0 No -36 0.96 Yes 34 97.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 21111853 - NR_024547 TMEM11 1 3.52 1.08 44 8.55 92.87 20 6.08 Yes 67 -1.26 No 24 0.75 Yes -24 0.78 Yes 46 80.89 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 21111853 - NR_024547 TMEM11 1 0.78 0.22 11 8.55 92.87 20 6.08 Yes 67 -1.26 No 24 0.75 Yes -24 0.78 Yes 46 80.89 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 21116726 - NR_024547 TMEM11 1 0.95 0.15 9 9.2 93.78 23 5.1 No 51 -3.73 No 0 0 No -22 0.56 No 48 50.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52889189 - NM_001198974 TMEM110-MUSTN1 1 0.4 0.21 12 8.89 80.93 26 5.93 Yes 13 1.35 Yes 0 0 No -25 0.85 Yes 45 86.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52902558 - NM_001198974 TMEM110-MUSTN1 1 0.33 0.11 7 10.07 86.02 26 5.2 No 13 1.1 Yes 0 0 No -25 0.8 Yes 45 61.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52920148 - NM_001198974 TMEM110-MUSTN1 1 1.29 0.38 20 6.95 85.11 16 3.7 No 37 2.44 Yes 0 0 No -19 0.84 Yes 51 84.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52929972 - NM_001198974 TMEM110-MUSTN1 1 10.8 3.13 62 7.65 84.76 26 5.78 Yes 13 0.99 Yes 25 0.86 Yes -25 0.75 Yes 45 78.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 112374663 - NM_001294314 TMEM116 1 0.81 0.11 7 2.12 66.91 29 5.66 Yes 38 0.74 No 27 0.59 Yes -28 0.77 Yes 45 69.2 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 112440191 - NM_001294314 TMEM116 1 1.43 0.14 9 3.01 0 31 6.48 Yes 18 1.42 Yes 0 0 No -30 0.81 Yes 40 89.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 75616738 - NM_001317803 TMEM120A 1 1.41 0.64 27 1.38 0 12 4.24 No 22 0.53 No 25 0.88 Yes -34 0.68 Yes 36 73.24 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 75616910 - NM_001317803 TMEM120A 1 0.59 0.15 9 -6.54 0 19 4.24 No 15 2.41 Yes 0 0 No -32 0.55 No 43 72.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 75617159 - NM_001317803 TMEM120A 1 0.32 0.15 9 1.01 69.04 12 4.33 No 67 -4.75 No 32 0.87 Yes -57 0.24 No 21 28.95 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 122188271 + NM_001080825 TMEM120B 1 3.05 1.11 45 6.1 86.54 20 5.08 No 25 0.91 Yes 18 0.92 Yes -19 0.63 No 51 80.52 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 122196168 + NM_001080825 TMEM120B 1 0.83 0.18 10 7.8 84.89 58 7.7 Yes 53 2.11 Yes 0 0 No -30 0.95 Yes 40 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122208820 + NM_001080825 TMEM120B 1 0.72 0.17 10 -2.39 0 11 4.12 No 25 1.28 Yes 0 0 No -37 0.8 Yes 33 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122211231 + NM_001080825 TMEM120B 1 1.18 0.4 21 6.55 81.95 30 5.74 Yes 17 1.31 Yes 0 0 No -29 0.85 Yes 41 84.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122212927 + NM_001080825 TMEM120B 1 0.64 0.24 15 4.4 70.87 28 6.28 Yes 15 0.82 Yes 24 0.96 Yes -27 0.86 Yes 43 76.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 122213371 + NM_001080825 TMEM120B 1 0.71 0.26 18 10.26 85.51 14 4.6 No 1 1.81 Yes 0 0 No -20 0.77 Yes 50 74.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 102272889 - NM_052932 TMEM123 1 0.42 1.68 53 3.6 68.57 26 6.51 Yes 59 0.83 Yes 0 0 No -25 0.87 Yes 45 90.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 102272936 - NM_052932 TMEM123 1 0.05 0.21 12 -3.55 68.55 44 6.07 Yes 31 0.88 Yes 0 0 No -24 0.79 Yes 46 70.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 102274048 - NM_052932 TMEM123 1 0.06 0.26 14 -1.16 0 19 4.47 No 6 0.5 No 0 0 No -18 0.88 Yes 52 87.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 102289886 - NM_052932 TMEM123 1 0.28 1.15 46 11.24 91.42 35 6.83 Yes 59 0.51 No 0 0 No -29 0.8 Yes 41 79.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 102319059 - NM_052932 TMEM123 1 0.02 0.1 7 6.19 72.4 16 5.05 No 72 1.53 Yes 0 0 No -23 0.78 Yes 47 82.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 102319107 - NM_052932 TMEM123 1 0.06 0.25 16 5.64 79.64 31 4.96 No 24 1.53 Yes 30 0.88 Yes -30 0.8 Yes 40 63.15 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 85360001 + NM_032273 TMEM126A 1 0.09 0.1 7 11.03 88.27 27 7.76 Yes 14 1.81 Yes 0 0 No -26 0.57 No 44 79.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 85361326 + NM_032273 TMEM126A 1 0.12 0.17 9 0.15 59.09 31 5.25 No 42 0.5 No 20 0.51 Yes -30 0.71 Yes 61 12.33 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 85361355 + NM_032273 TMEM126A 1 0.13 0.14 9 3.19 77.68 35 5.1 No 71 0.5 No 20 0.51 Yes -31 0.31 No 47 38.77 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 85365084 + NM_032273 TMEM126A 1 0.07 0.14 8 -8.51 0 27 6.16 Yes 2 0.14 No 26 0.88 Yes -26 0.83 Yes 56 33.29 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 85365168 + NM_032273 TMEM126A 1 0.14 0.29 16 6.6 74.47 26 8.03 Yes 13 0.41 No 0 0 No -25 0.64 No 45 68.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 85365084 + NM_032273 TMEM126A 1 0.17 0.33 19 -8.51 0 27 6.16 Yes 2 0.14 No 26 0.88 Yes -26 0.83 Yes 56 33.29 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 85365168 + NM_032273 TMEM126A 1 0.34 0.67 32 6.6 74.47 26 8.03 Yes 13 0.41 No 0 0 No -25 0.64 No 45 68.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 85345521 + NM_001193537 TMEM126B 1 0.22 0.35 22 9.16 86.88 33 5.88 Yes 20 0.67 No 0 0 No -32 0.81 Yes 38 87.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 96920716 - NM_017849 TMEM127 1 0.52 0.57 28 6.27 71.58 25 5.38 No 31 0.25 No 0 0 No -22 0.71 Yes 48 73.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 96922303 - NM_017849 TMEM127 1 2.12 2.42 57 3.01 0 29 6.58 Yes 16 1.34 Yes 0 0 No -28 0.65 No 33 70.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 96930029 - NM_017849 TMEM127 1 0.2 0.25 13 7.33 76.37 56 6.14 Yes -1 0.28 No 0 0 No -55 0.77 Yes 15 83.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 96931228 - NM_017849 TMEM127 1 88.37 27.72 72 7.91 80.98 28 5.2 No 15 1.4 Yes 27 0.9 Yes -27 0.72 Yes 43 85.89 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 4237978 - NM_032927 TMEM128 1 1.14 0.92 41 -4.49 0 9 3.5 No -3 -2.16 No 0 0 No -37 0.59 No 37 51.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 4237982 - NM_032927 TMEM128 1 5.73 4.51 69 -4.02 83.13 37 5.71 Yes 60 -1.14 No 0 0 No -33 0.58 No 41 53.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 4238805 - NM_032927 TMEM128 1 6.63 5.25 71 10.93 85.31 24 4.89 No 66 1.72 Yes 23 0.9 Yes -23 0.89 Yes 47 92.89 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 4241786 - NM_032927 TMEM128 1 0.18 0.18 10 1.48 74.39 58 8.37 Yes 45 0.77 Yes 0 0 No -37 0.72 Yes 33 86.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 1720609 - NM_138385 TMEM129 1 0.67 0.25 15 11.1 90.1 33 4.66 No 13 1.34 Yes 25 0.93 Yes -25 0.68 Yes 45 69.24 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 98373874 - NM_015348 TMEM131 1 0.1 0.1 7 6.31 69.56 23 5 No 19 1.51 Yes 29 0.83 Yes -27 0.46 No 43 48.04 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 98375514 - NM_015348 TMEM131 1 11.41 11.99 72 1.2 77.94 23 7.21 Yes 10 1.29 Yes 0 0 No -25 0.47 No 45 67.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 98377114 - NM_015348 TMEM131 1 0.95 0.79 39 3.93 69.87 22 5.2 No 75 1.5 Yes 0 0 No -21 0.65 No 49 65.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 98378619 - NM_015348 TMEM131 1 0.22 0.28 17 4.55 70.83 40 6.62 Yes 60 1.85 Yes 0 0 No -39 0.73 Yes 31 86.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 98391890 - NM_015348 TMEM131 1 0.27 0.31 17 6.04 73.86 36 6.23 Yes 23 0.01 No 0 0 No -35 0.78 Yes 35 84.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 98392190 - NM_015348 TMEM131 1 0.19 0.25 15 5.31 75.24 15 5 No 46 0.54 No 0 0 No -21 0.56 No 47 48.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98403231 - NM_015348 TMEM131 1 0.18 0.13 7 2.71 69.28 38 6.32 Yes 25 0.3 No 0 0 No -37 0.95 Yes 33 97.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 98403262 - NM_015348 TMEM131 1 1.37 1.01 46 6.46 81.14 31 5.74 Yes 74 0.42 No 0 0 No -28 0.5 No 49 58.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98403288 - NM_015348 TMEM131 1 0.21 0.15 10 6.02 83.36 34 5.83 Yes 48 0.41 No 0 0 No -27 0.55 No 43 53.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98409197 - NM_015348 TMEM131 1 0.12 0.17 11 4.87 73.84 22 4.26 No 12 1.12 Yes 0 0 No -24 0.85 Yes 46 93.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 98418997 - NM_015348 TMEM131 1 0.17 0.25 13 -5.3 0 27 5.82 Yes 14 0.77 No 0 0 No -31 0.53 No 39 67.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98419007 - NM_015348 TMEM131 1 0.5 0.64 29 -1.3 0 38 5.72 Yes 4 0.86 Yes 23 0.75 Yes -21 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 98422119 - NM_015348 TMEM131 1 0.11 0.11 7 7.47 87.77 25 4.85 No 63 0.36 No 0 0 No -24 0.59 No 35 48.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98449694 - NM_015348 TMEM131 1 0.36 0.56 36 2.84 71.62 17 4.43 No 4 1.5 Yes 0 0 No -24 0.73 Yes 46 80.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 98451496 - NM_015348 TMEM131 1 0.16 0.24 16 8.64 91.35 29 5.63 Yes 57 -2.48 No 0 0 No -28 0.58 No 42 61.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98478097 - NM_015348 TMEM131 1 0.54 0.68 38 12.84 88.58 38 6.31 Yes 25 0.87 Yes 0 0 No -26 0.49 No 47 68.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 98528135 - NM_015348 TMEM131 1 2.27 2.44 62 9.9 90.46 75 7.48 Yes 3 1.79 Yes 0 0 No -31 0.79 Yes 39 76.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 98541929 - NM_015348 TMEM131 1 0.37 0.42 23 1.45 62.07 40 7.13 Yes 27 0.6 No 0 0 No -39 0.65 No 31 69.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 98601000 - NM_015348 TMEM131 1 1.62 1.35 49 9.98 87.26 26 7.48 Yes 36 0.87 Yes 0 0 No -25 0.78 Yes 45 90.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 98603958 - NM_015348 TMEM131 1 0.72 0.57 23 2.36 0 50 6.74 Yes 27 1.72 Yes 0 0 No -39 0.77 Yes 31 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 67232133 - NM_001078651 TMEM134 1 6.58 3.53 65 -0.45 65.41 30 4.94 No 41 1.77 Yes 24 0.77 Yes -29 0.73 Yes 41 52.57 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 67232739 - NM_001078651 TMEM134 1 6.6 2.17 65 7.85 80.63 33 6 Yes 59 0.38 No 25 0.24 Yes -36 0.38 No 45 38.15 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 67234636 - NM_001078651 TMEM134 1 0.61 0.22 13 10.07 90.19 18 5.47 No 5 0.35 No 23 0.6 Yes -25 0.6 No 47 81.07 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 67235062 - NM_001078651 TMEM134 1 325.93 26.38 72 7.69 85.27 22 7.27 Yes 9 1.28 Yes 18 0.92 Yes -21 0.95 Yes 49 91.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 86869694 + NR_033149 TMEM135 1 0.32 0.13 9 7.74 95.08 26 7.55 Yes 13 1.35 Yes 0 0 No -25 0.94 Yes 45 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 87007115 + NR_033149 TMEM135 1 0.65 0.33 17 -0.65 60.23 86 8.73 Yes 73 0.17 No 0 0 No -56 0.77 Yes 14 76.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61133589 + NM_016464 TMEM138 1 0.55 0.93 42 8.44 93.21 43 5.86 Yes 15 1.25 Yes 0 0 No -27 0.83 Yes 43 68.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 61134878 + NM_016464 TMEM138 1 0.58 0.82 37 6.15 69.16 32 5.04 No 1 0.98 Yes 23 0.67 Yes -31 0.66 No 50 47.65 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 61134899 + NM_016464 TMEM138 1 5.42 7.32 71 8.93 84.3 24 5.48 No 22 0.94 Yes 23 0.67 Yes -23 0.72 Yes 47 84.81 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 61135723 + NM_016464 TMEM138 1 0.23 0.26 15 1.46 0 57 7.74 Yes 44 0.96 Yes 30 0.05 Yes -56 0.94 Yes 14 85.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 61136071 + NM_016464 TMEM138 1 4.72 5.75 71 3.99 77.32 32 6.16 Yes 19 1.24 Yes 0 0 No -31 0.88 Yes 39 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61136243 + NM_016464 TMEM138 1 1.06 1.29 48 7.79 93.59 28 5.39 No 35 1.6 Yes 27 0.84 Yes -27 0.77 Yes 43 84.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 139686077 + NM_032928 TMEM141 1 13.44 8.6 72 6.19 81.74 13 5.19 No 0 1.5 Yes 0 0 No -20 0.56 No 50 41.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139686081 + NM_032928 TMEM141 1 0.44 0.29 16 0.95 0 17 5.56 Yes 4 1.46 Yes 0 0 No -24 0.64 No 54 61.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139686207 + NM_032928 TMEM141 1 0.46 0.29 15 -0.31 72.86 17 5.2 No 53 1.25 Yes 0 0 No -25 0.56 No 54 38.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 48844440 - NM_018273 TMEM143 1 8.34 0.5 26 8.22 91.4 12 5.52 No -1 0.42 No 0 0 No -21 0.54 No 44 62.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 48848583 - NM_018273 TMEM143 1 0.81 0.1 7 4.38 78.4 20 5.21 No 30 2.09 Yes 0 0 No -31 0.54 No 39 45.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 48863441 - NM_018273 TMEM143 1 4.83 0.57 31 -5.8 83.48 24 4.8 No 59 -1.7 No 23 0.77 Yes -21 0.84 Yes 47 67.9 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 36038193 + NM_001242597 TMEM147 1 0.12 0.18 12 -1.22 62.14 21 5.04 No 74 0.39 No 20 0.84 Yes -21 0.39 No 50 42.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 36032801 - NR_038396 TMEM147-AS1 1 1.2 0.17 8 2.89 67.6 26 6.24 Yes 54 0.53 No 0 0 No -25 0.91 Yes 45 87.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36032831 - NR_038396 TMEM147-AS1 1 8.99 1.06 39 6.39 88.04 37 5.96 Yes 24 0.51 No 23 0.48 Yes -23 0.61 No 34 58.55 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 36032940 - NR_038396 TMEM147-AS1 1 4.68 0.42 23 4.88 81.08 19 4.26 No 19 1.93 Yes 0 0 No -18 0.56 No 52 82.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 52539711 + NM_014051 TMEM14A 1 0.56 0.33 21 3.97 84.41 38 6.95 Yes 25 0.76 No 0 0 No -37 0.71 Yes 33 81.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 52539719 + NM_014051 TMEM14A 1 0.46 0.28 15 -3.34 0 11 4.12 No 33 0.75 No 0 0 No -45 0.75 Yes 25 88.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 52548863 + NM_014051 TMEM14A 1 0.39 0.53 29 2.13 59.83 31 5.26 No 52 0.2 No 21 0.76 Yes -33 0.4 No 42 64.78 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 52548881 + NM_014051 TMEM14A 1 0.31 0.42 25 1.17 0 9 3.87 No 70 0.21 No 0 0 No -27 0.89 Yes 43 93.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 10749354 + NM_001286488 TMEM14B 1 0.05 0.1 7 -5.71 0 18 4.23 No 32 -3.34 No 0 0 No -17 0.7 Yes 53 35.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 10749440 + NM_001286488 TMEM14B 1 0.17 0.32 20 1.53 0 9 3.87 No 14 1.37 Yes 0 0 No -26 0.53 No 44 78.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 10751369 + NM_001286488 TMEM14B 1 0.1 0.22 16 2.48 0 32 5.63 Yes 27 0.7 No 35 0.09 Yes -32 0.57 No 44 41.42 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 10724802 + NM_001165258 TMEM14C 1 2568.69 122.01 72 7.91 96.92 21 4.8 No 8 1.26 Yes 31 0.28 Yes -20 0.91 Yes 50 87.85 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 10724808 + NM_001165258 TMEM14C 1 16.84 0.72 33 0.32 0 10 3.46 No 14 1.25 Yes 0 0 No -26 0.91 Yes 44 90.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 10725502 + NM_001165258 TMEM14C 1 0.1 0.15 10 11.55 91.12 27 6.57 Yes 35 0.72 No 0 0 No -26 0.6 No 44 61.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 85826452 - NM_001031738 TMEM150A 1 2.62 0.17 12 2.94 66.01 14 6.4 Yes 74 1.96 Yes 24 0.52 Yes -24 0.49 No 53 53.66 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 85827883 - NM_001031738 TMEM150A 1 1.87 0.13 8 7.2 93.45 17 4.8 No 4 0.95 Yes 22 0.51 Yes -22 0.49 No 54 63.22 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 85827915 - NM_001031738 TMEM150A 1 2.5 0.13 9 9.78 82.28 30 5.65 Yes 59 1.15 Yes 22 0.51 Yes -29 0.78 Yes 41 74.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 153549666 - NM_152680 TMEM154 1 0.39 0.17 9 -6.22 0 34 5.39 No 5 1.54 Yes 0 0 No -27 0.45 No 43 46.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 153568145 - NM_152680 TMEM154 1 1 0.4 24 9.94 79.67 30 6.16 Yes 17 1.47 Yes 29 0.8 Yes -29 0.72 Yes 41 62.5 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 153568480 - NM_152680 TMEM154 1 11.23 4.54 68 8.69 98.16 29 4.94 No 0 0.24 No 0 0 No -28 0.89 Yes 42 96.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 153573119 - NM_152680 TMEM154 1 1.04 0.46 25 11.46 89.68 39 5.24 No 34 1.95 Yes 0 0 No -34 0.56 No 36 75.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 38970932 - NM_024943 TMEM156 1 0.63 0.39 21 9.87 86.15 20 6.08 Yes 50 -3.21 No 0 0 No -26 0.47 No 44 34.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 38972755 - NM_024943 TMEM156 1 14.95 7.89 72 4.63 80.47 27 5.39 No 14 0.9 Yes 0 0 No -26 0.84 Yes 44 83.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 38973717 - NM_024943 TMEM156 1 0.45 0.22 15 8.97 84.42 36 5.05 No 50 1.6 Yes 0 0 No -29 0.6 No 41 58.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 38982615 - NM_024943 TMEM156 1 2.24 1.15 47 6.97 96.35 23 4.98 No 1 0.41 No 0 0 No -22 0.69 Yes 48 74.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 38982651 - NM_024943 TMEM156 1 0.29 0.14 10 5.17 83.84 23 5.2 No 67 0.85 Yes 0 0 No -22 0.71 Yes 50 84.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 38982807 - NM_024943 TMEM156 1 1.98 1.01 42 8.32 86.12 23 5.09 No 10 0.75 No 0 0 No -22 0.76 Yes 48 88.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 38983900 - NM_024943 TMEM156 1 0.31 0.18 9 2.04 68.85 26 4.09 No 57 0.94 Yes 0 0 No -22 0.86 Yes 45 52.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 38995560 - NM_024943 TMEM156 1 0.41 0.26 14 4.53 79.28 31 4.77 No 70 1.17 Yes 0 0 No -30 0.49 No 45 50.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 38996045 - NM_024943 TMEM156 1 0.31 0.13 7 9.52 82.81 24 8.55 Yes -1 1.01 Yes 0 0 No -23 0.62 No 47 68.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39000364 - NM_024943 TMEM156 1 0.36 0.22 9 5.32 80.08 30 4.96 No 17 1.18 Yes 0 0 No -29 0.78 Yes 41 79.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39005474 - NM_024943 TMEM156 1 0.27 0.15 10 14.3 87.64 31 5.74 Yes 12 1.03 Yes 0 0 No -30 0.82 Yes 40 87.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39016375 - NM_024943 TMEM156 1 0.65 0.4 18 4.74 84.41 23 7.99 Yes 10 1.63 Yes 0 0 No -22 0.73 Yes 48 85.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39017990 - NM_024943 TMEM156 1 0.38 0.19 13 11.46 92.63 43 6.78 Yes 35 0.63 No 0 0 No -42 0.87 Yes 28 91.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 39027347 - NM_024943 TMEM156 1 0.43 0.25 14 9.88 97.73 29 4.44 No 20 1.59 Yes 0 0 No -28 0.9 Yes 42 92.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39030218 - NM_024943 TMEM156 1 8.98 4.88 58 4.95 72.67 35 6.63 Yes 22 1.34 Yes 34 0.66 Yes -34 0.59 No 36 70.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 39033114 - NM_024943 TMEM156 1 0.67 0.4 20 4.57 82.11 21 6.24 Yes 43 0.47 No 0 0 No -20 0.5 No 50 54.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 21172405 + NM_020422 TMEM159 1 60.35 9.76 72 5.67 79.69 27 6.48 Yes 14 2.09 Yes 26 0.96 Yes -26 0.92 Yes 44 94.58 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 21176472 + NM_020422 TMEM159 1 0.38 0.14 8 6.42 82.99 20 8.34 Yes 7 1.05 Yes 0 0 No -23 0.83 Yes 47 68.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 21178160 + NM_020422 TMEM159 1 4.91 1.99 59 12.72 91.77 37 7.93 Yes 24 1.41 Yes 30 0.37 Yes -24 0.5 No 34 82.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 21188457 + NM_020422 TMEM159 1 0.38 0.18 10 8.9 91.13 26 5.58 Yes 45 0.73 No 25 0.77 Yes -25 0.78 Yes 45 77.64 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 21188482 + NM_020422 TMEM159 1 0.29 0.15 8 7.86 79.47 30 5.82 Yes 70 0.75 No 0 0 No -27 0.53 No 41 51.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 21190117 + NM_020422 TMEM159 1 1.33 0.6 30 9.06 84.04 35 6.4 Yes 50 -3.01 No 34 0.29 Yes -32 0.49 No 38 59.04 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 21190146 + NM_020422 TMEM159 1 0.32 0.11 7 3.24 75.88 15 3.89 No 2 1.1 Yes 0 0 No -24 0.97 Yes 46 95.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 19243243 - NM_017814 TMEM161A 1 7.56 2.29 63 7.28 84.17 52 7.62 Yes NA NA NA 27 0.51 Yes -27 0.42 No 48 60.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 19243365 - NM_017814 TMEM161A 1 0.24 0.1 7 -1.88 72.61 21 4.69 No 66 1.45 Yes 0 0 No -20 0.86 Yes 50 47.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 19244116 - NM_017814 TMEM161A 1 1.1 0.26 17 6.06 78.19 26 4.99 No 17 1.9 Yes 29 0.69 Yes -25 0.69 Yes 45 61.88 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 19245726 - NM_017814 TMEM161A 1 2.18 0.29 18 6.61 83.17 13 5.57 Yes 47 1.69 Yes 24 0.4 Yes -32 0.29 No 50 25.38 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 87493541 - NM_001289007 TMEM161B 1 0.4 0.17 11 5.15 81.9 27 5.64 Yes 67 -2.99 No 0 0 No -26 0.61 No 36 60.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 87494887 - NM_001289007 TMEM161B 1 0.45 0.36 22 -0.55 60.04 39 6.49 Yes 26 0.93 Yes 38 0.15 Yes -41 0.77 Yes 29 81.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 87502957 - NM_001289007 TMEM161B 1 1.13 0.68 32 0.31 72.49 23 6.69 Yes 46 1.29 Yes 0 0 No -22 0.71 Yes 48 51.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 87502960 - NM_001289007 TMEM161B 1 5.65 3.24 68 -0.73 69.17 20 6.47 Yes 43 1.29 Yes 23 0.7 Yes -19 0.61 No 51 52.08 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 87502993 - NM_001289007 TMEM161B 1 0.31 0.19 13 -2.34 0 23 6.69 Yes 10 1.31 Yes 23 0.7 Yes -38 0.85 Yes 32 94.16 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 87506531 - NM_001289007 TMEM161B 1 0.62 0.35 18 2.15 0 12 4.24 No 55 0.8 Yes 0 0 No -34 0.79 Yes 36 89.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 87517289 - NM_001289007 TMEM161B 1 1.35 0.96 39 7.06 89.33 27 5.2 No 24 -1.12 No 26 0.83 Yes -53 0.39 No 21 70.45 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 87517289 - NM_001289007 TMEM161B 1 0.2 0.11 8 7.06 89.33 27 5.2 No 24 -1.12 No 26 0.83 Yes -53 0.39 No 21 70.45 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 87517578 - NM_001289007 TMEM161B 1 6.85 4.72 68 7.86 83.08 36 6.55 Yes 8 0.1 No 29 0.55 Yes -35 0.52 No 47 42.36 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 87517578 - NM_001289007 TMEM161B 1 0.31 0.21 10 7.86 83.08 36 6.55 Yes 8 0.1 No 29 0.55 Yes -35 0.52 No 47 42.36 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 87527604 - NM_001289007 TMEM161B 1 0.71 0.51 27 9.84 85.91 19 5.83 Yes 6 1.99 Yes 0 0 No -18 0.76 Yes 52 83.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 87546142 - NM_001289007 TMEM161B 1 1.69 0.74 33 7.36 81.49 35 6.86 Yes 8 1.29 Yes 0 0 No -20 0.73 Yes 50 43.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 87559955 - NM_001289007 TMEM161B 1 1.4 0.58 27 6.69 72.9 34 6.16 Yes 21 0.39 No 0 0 No -33 0.74 Yes 37 89.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 87565284 + NR_105019 TMEM161B-AS1 1 35.34 7.06 71 6.89 90.41 24 5.2 No 17 0.14 No 23 0.92 Yes -23 0.78 Yes 47 70.14 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 87576960 + NR_105019 TMEM161B-AS1 1 0.51 0.13 9 6.78 78 23 5.1 No 29 1.41 Yes 0 0 No -22 0.86 Yes 48 78.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 109399889 + NM_032227 TMEM164 1 0.22 0.11 8 7.48 87.66 29 5.1 No 63 0.21 No 0 0 No -28 0.77 Yes 42 90.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 56282208 + NR_073070 TMEM165 1 3.45 11.89 72 8.2 87.64 22 5.83 Yes 9 1.28 Yes 0 0 No -21 0.8 Yes 49 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 56283323 + NR_073070 TMEM165 1 0.07 0.22 14 5.37 75.42 60 5.09 No 47 -1.7 No 0 0 No -30 0.85 Yes 40 82.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 56284214 + NR_073070 TMEM165 1 0.08 0.31 13 8.84 90.85 22 5.82 Yes 9 0.34 No 21 0.61 Yes -21 0.56 No 49 64.77 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 82367250 - NM_174909 TMEM167A 1 0.06 0.15 11 5.29 69.86 41 7.79 Yes 28 2.36 Yes 27 0.87 Yes -27 0.77 Yes 43 81.28 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 82372519 - NM_174909 TMEM167A 1 0.45 1.07 35 12.46 97.44 27 5.74 Yes 14 0.9 Yes 0 0 No -26 0.76 Yes 44 75.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109637130 + NM_020141 TMEM167B 1 0.11 0.15 8 1.05 60.15 40 8.84 Yes 27 1.05 Yes 0 0 No -29 0.45 No 31 80.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 109639391 + NM_020141 TMEM167B 1 0.18 0.24 13 6.74 84.75 36 6.03 Yes 70 1.2 Yes 0 0 No -33 0.45 No 35 61.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 112412874 - NM_001287497 TMEM168 1 1.42 1.11 45 6.75 87.28 23 6 Yes 73 0.47 No 22 0.5 Yes -22 0.81 Yes 48 59.74 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 112418468 - NM_001287497 TMEM168 1 0.59 0.28 15 4.32 67.2 42 6.27 Yes 72 1.12 Yes 0 0 No -41 0.78 Yes 29 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 11567641 + NM_001100829 TMEM170B 1 0.76 0.24 13 9.49 83.04 23 5.2 No 10 1.9 Yes 0 0 No -22 0.89 Yes 48 95.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 11574407 + NM_001100829 TMEM170B 1 0.65 0.18 12 8.38 73.94 40 5.31 No 17 1.6 Yes 0 0 No -29 0.61 No 41 55.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 939786 + NM_001297427 TMEM175 1 0.66 0.15 8 9.03 75.43 20 5.66 Yes 7 2.12 Yes 19 0.76 Yes -25 0.73 Yes 45 68.09 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 944211 + NM_001297427 TMEM175 1 2.37 0.18 10 5.25 82.97 27 5.29 No 14 1.44 Yes 23 0.96 Yes -26 0.9 Yes 44 90.12 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 943820 + NM_001297427 TMEM175 1 5.61 0.24 12 0.21 65.95 48 7.59 Yes 35 1.47 Yes 0 0 No -47 0.85 Yes 23 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 944211 + NM_001297427 TMEM175 1 4.92 0.29 17 5.25 82.97 27 5.29 No 14 1.44 Yes 23 0.96 Yes -26 0.9 Yes 44 90.12 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 945469 + NM_001297427 TMEM175 1 683.59 44.36 72 11.68 89.66 20 6.36 Yes 7 1.43 Yes 28 0.66 Yes -28 0.72 Yes 51 71.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 949549 + NM_001297427 TMEM175 1 0.34 0.1 7 -0.72 0 10 4 No 62 0.76 No 0 0 No -28 0.42 No 37 57.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 951477 + NM_001297427 TMEM175 1 0.89 0.28 14 4.17 66.64 23 5.81 Yes -4 0.16 No 0 0 No -27 0.39 No 45 39.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62556573 + NM_199337 TMEM179B 1 1.56 0.89 39 5.22 79.02 35 8.42 Yes 22 1.38 Yes 0 0 No -34 0.73 Yes 36 70.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62556597 + NM_199337 TMEM179B 1 2.83 1.61 59 6.91 74.87 27 5.74 Yes 46 1.37 Yes 23 0.06 Yes -26 0.93 Yes 44 89.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 62556658 + NM_199337 TMEM179B 1 0.21 0.11 7 5.2 83.39 35 8.36 Yes 75 0.87 Yes 30 0.33 Yes -30 0.85 Yes 39 57.69 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 62556743 + NM_199337 TMEM179B 1 0.34 0.51 25 0.61 70.49 21 3.66 No 2 0.56 No 25 0.62 Yes -23 0.64 No 56 35.86 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 62556765 + NM_199337 TMEM179B 1 0.09 0.13 9 2.82 79.4 31 3.99 No 24 1 Yes 0 0 No -25 0.46 No 45 66.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 675628 - NM_152834 TMEM18 1 2.63 1.61 53 4.49 83.18 29 5.92 Yes 43 -1.57 No 0 0 No -28 0.86 Yes 42 86.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 159002172 + NM_020823 TMEM181 1 0.29 0.13 7 7.82 85.46 30 5.02 No 17 0.44 No 0 0 No -25 0.6 No 41 64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 159007790 + NM_020823 TMEM181 1 0.66 0.31 17 9.96 93.85 32 6.38 Yes 1 1.05 Yes 0 0 No -31 0.54 No 46 58.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 159008772 + NM_020823 TMEM181 1 0.53 0.25 14 6.03 77.96 24 4.52 No 55 0.82 Yes 0 0 No -23 0.78 Yes 47 77.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 159010679 + NM_020823 TMEM181 1 1.75 0.92 38 6.19 84.24 20 5.1 No 7 0.59 No 28 0.65 Yes -19 0.84 Yes 51 80.79 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 159027998 + NM_020823 TMEM181 1 0.35 0.17 8 11.42 96.55 29 5.74 Yes 16 -0.02 No 0 0 No -28 0.73 Yes 42 74.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 159050402 + NM_020823 TMEM181 1 0.96 0.22 14 3.63 75.95 41 6.54 Yes 76 0.86 Yes 0 0 No -27 0.61 No 44 63.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 159050755 + NM_020823 TMEM181 1 0.55 0.15 10 10.23 83.94 27 5.74 Yes 26 0.9 Yes 32 0.28 Yes -34 0.49 No 46 46.18 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 159050764 + NM_020823 TMEM181 1 0.34 0.11 8 -4.47 0 14 4.24 No 35 0.89 Yes 0 0 No -13 0.73 Yes 57 55.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 159052825 + NM_020823 TMEM181 1 0.58 0.17 9 -1.5 0 15 3.32 No 65 0.22 No 20 0.94 Yes -18 0.23 No 58 32.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 103391588 + NM_144632 TMEM182 1 30.38 2.03 62 11.03 88.2 36 8.3 Yes 23 0.73 No 31 0.67 Yes -35 0.44 No 35 61.4 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 103400352 + NM_144632 TMEM182 1 3.56 0.22 13 7.68 87.4 22 4.54 No 31 1.14 Yes 0 0 No -25 0.53 No 45 31.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 202977794 + NM_138391 TMEM183A 1 0.08 0.11 7 3.46 68.48 23 5.74 Yes 35 1.1 Yes 0 0 No -26 0.48 No 23 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 202979467 + NM_138391 TMEM183A 1 1.19 1 8 10.94 92.8 18 4.67 No 38 0.37 No 0 0 No -27 0.5 No 49 58.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 202984019 + NM_138391 TMEM183A 1 28.41 33.81 72 3.01 81.71 23 5.4 No 36 -2.36 No 0 0 No -22 0.42 No 48 67.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 202985066 + NM_138391 TMEM183A 1 0.09 0.13 9 -0.36 72.76 13 4.9 No 58 -4.12 No 23 0.71 Yes -19 0.4 No 53 39.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 202985131 + NM_138391 TMEM183A 1 0.07 0.1 7 5.64 71.98 47 7.12 Yes 65 -2.57 No 0 0 No -37 0.61 No 33 91.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 202985695 + NM_138391 TMEM183A 1 0.09 0.11 8 1.21 74.72 50 6.17 Yes 24 1.17 Yes 0 0 No -36 0.71 Yes 34 56.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 202986883 + NM_138391 TMEM183A 1 5.12 6.13 72 12.2 88.03 24 6.71 Yes 11 0.74 No 23 0.75 Yes -23 0.8 Yes 47 69.37 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 202986886 + NM_138391 TMEM183A 1 0.88 1.1 41 5.85 80.03 27 6.93 Yes 14 0.73 No 0 0 No -26 0.81 Yes 44 69.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 202987628 + NM_138391 TMEM183A 1 2.03 2.5 60 8.75 90.74 25 5.27 No 59 1.21 Yes 0 0 No -24 0.86 Yes 46 89.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 202988303 + NM_138391 TMEM183A 1 0.64 0.85 39 7.33 83.99 38 6.24 Yes 74 -5.05 No 0 0 No -32 0.69 Yes 38 73.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 202989928 + NM_138391 TMEM183A 1 0.24 0.33 19 2.92 0 11 4.12 No 14 1.05 Yes 25 0.52 Yes -26 0.93 Yes 44 92.5 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 38621009 - NM_012264 TMEM184B 1 0.15 0.1 7 1.86 79.77 14 5.2 No 70 1.26 Yes 24 0.78 Yes -22 0.42 No 48 32.98 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 38621550 - NM_012264 TMEM184B 1 1.32 1.08 43 -0.07 72.59 27 7.05 Yes 14 1.08 Yes 0 0 No -26 0.65 No 44 82.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 38627406 - NM_012264 TMEM184B 1 0.97 0.67 30 6.11 75.34 19 6.32 Yes 6 1.08 Yes 18 0.42 Yes -37 0.45 No 33 50.38 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 38641087 - NM_012264 TMEM184B 1 0.53 0.33 15 5.6 80.18 30 5.37 No 30 0.49 No 0 0 No -29 0.7 Yes 41 76.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 38642892 - NM_012264 TMEM184B 1 0.22 0.14 9 10.16 87.85 15 5.83 Yes 26 0.25 No 27 0.65 Yes -22 0.53 No 48 63.28 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 148546099 + NM_018241 TMEM184C 1 0.21 0.18 11 2.14 73.45 34 9.32 Yes -2 0.06 No 0 0 No -33 0.64 No 37 68.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 148554023 + NM_018241 TMEM184C 1 1.28 1.17 45 5.72 73.05 45 7.96 Yes 6 0.88 Yes 19 0.41 Yes -30 0.44 No 40 53.15 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 148554936 + NM_018241 TMEM184C 1 1.12 0.76 36 -3.57 75.48 26 5.47 No 13 0.6 No 0 0 No -25 0.95 Yes 45 97.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 148554994 + NM_018241 TMEM184C 1 0.42 0.29 19 -2.26 63.95 61 6.11 Yes 71 0.61 No 0 0 No -20 0.7 Yes 34 85.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 148554997 + NM_018241 TMEM184C 1 0.43 0.29 21 -2.83 61.64 64 6.24 Yes 74 0.61 No 0 0 No -23 0.89 Yes 31 76.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 148555302 + NM_018241 TMEM184C 1 0.11 0.14 9 4.25 85.91 16 4.59 No 32 -4.43 No 21 0.97 Yes -28 0.53 No 43 53.51 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 148685197 - NM_032508 TMEM185A 1 1.26 0.25 15 9.08 83.25 37 7.83 Yes 24 0.86 Yes 0 0 No -40 0.46 No 30 59.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 148685733 - NM_032508 TMEM185A 1 2.44 0.65 36 -0.2 0 25 7.39 Yes 12 1.41 Yes 0 0 No -28 0.67 Yes 42 77.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 148688607 - NM_032508 TMEM185A 1 0.86 0.21 14 6.28 89.01 28 5.83 Yes 65 1.34 Yes 0 0 No -27 0.69 Yes 43 69.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 148688651 - NM_032508 TMEM185A 1 1.26 0.32 19 5.42 76.21 34 6.93 Yes 21 1.4 Yes 0 0 No -33 0.82 Yes 37 85.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 148690517 - NM_032508 TMEM185A 1 3.86 0.9 46 0.57 0 37 5.24 No 56 1.4 Yes 31 0.86 Yes -36 0.72 Yes 34 79.9 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 148690517 - NM_032508 TMEM185A 1 2.83 0.54 29 0.57 0 37 5.24 No 56 1.4 Yes 31 0.86 Yes -36 0.72 Yes 34 79.9 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 48699455 - NM_199203 TMEM189-UBE2V1 1 0.08 0.47 24 -2 0 24 5.73 Yes 11 0.88 Yes 0 0 No -23 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 72084118 + NM_018279 TMEM19 1 0.31 0.29 16 6.08 74.96 24 5.92 Yes 11 0.99 Yes 23 0.89 Yes -23 0.83 Yes 47 90.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 72089485 + NM_018279 TMEM19 1 0.19 0.18 10 7.69 86.46 12 5.82 Yes -1 1.9 Yes 0 0 No -25 0.77 Yes 45 82.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 72097756 + NM_018279 TMEM19 1 0.12 0.15 7 10.91 92.27 27 8.77 Yes 41 1.26 Yes 26 0.87 Yes -26 0.51 No 44 91.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 166020153 - NM_001100389 TMEM192 1 0.23 0.14 9 5.43 89.08 25 5.77 Yes 65 1.08 Yes 0 0 No -23 0.41 No 47 44.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 166032832 - NM_001100389 TMEM192 1 15.39 4.58 70 7.46 91.11 30 5.22 No 17 0.91 Yes 29 0.87 Yes -29 0.9 Yes 41 90.41 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 26685336 + NM_152464 TMEM199 1 0.18 0.24 16 8.93 92.06 36 7.43 Yes 23 1.63 Yes 35 0.86 Yes -35 0.9 Yes 35 83.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 26687173 + NM_152464 TMEM199 1 0.6 0.82 35 5.2 85.02 18 5.48 No 5 1.23 Yes 23 0.52 Yes -17 0.51 No 53 79.18 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 26687176 + NM_152464 TMEM199 1 0.19 0.28 14 3.25 80.12 21 5.74 Yes 8 1.2 Yes 0 0 No -20 0.81 Yes 50 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26688696 + NM_152464 TMEM199 1 6.24 4.33 69 6.05 87.02 34 5.79 Yes 21 1.18 Yes 0 0 No -33 0.46 No 37 65.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 74315108 - NM_013390 TMEM2 1 0.38 0.18 11 8.84 83.88 33 7.04 Yes 70 1.27 Yes 0 0 No -32 0.89 Yes 38 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 74345846 - NM_013390 TMEM2 1 0.23 0.13 7 -1.36 0 14 4.47 No 69 0.18 No 22 0.87 Yes -22 0.78 Yes 48 55.27 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 9670672 + NM_001130924 TMEM201 1 0.29 0.1 7 6.56 80.2 27 5.74 Yes NA NA NA 0 0 No -26 0.78 Yes 44 81.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 9671072 + NM_001130924 TMEM201 1 10.65 3.11 65 8.21 89.11 23 4.9 No 17 1.43 Yes 22 0.96 Yes -22 0.83 Yes 48 86.91 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 11455967 - NM_001321113 TMEM205 1 0.29 0.6 32 6.52 86.11 28 6.19 Yes 15 0.26 No 0 0 No -27 0.9 Yes 43 93.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 11456414 - NM_001321113 TMEM205 1 24.73 0.96 42 2.49 74.76 47 8.49 Yes 15 1.54 Yes 27 0.94 Yes -27 0.89 Yes 43 93.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 212537842 - NM_001198862 TMEM206 1 0.95 0.4 19 8.25 85.71 28 6.7 Yes 15 0.68 No 0 0 No -27 0.97 Yes 43 95.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 212538715 - NM_001198862 TMEM206 1 0.35 0.21 14 -0.49 0 33 6.56 Yes 20 1.42 Yes 0 0 No -32 0.73 Yes 38 73.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 212550227 - NM_001198862 TMEM206 1 0.6 0.24 14 8.18 86.89 24 5.48 No 20 0.09 No 23 0.54 Yes -23 0.49 No 47 68.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 212561075 - NM_001198862 TMEM206 1 0.75 0.28 15 3.06 76.46 23 5 No 10 0.38 No 22 0.64 Yes -22 0.78 Yes 48 63.48 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 212563738 - NM_001198862 TMEM206 1 0.36 0.11 8 9.25 85.94 28 5.29 No 60 -1.02 No 0 0 No -59 0.5 No 12 76.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 212580654 - NM_001198862 TMEM206 1 0.49 0.17 9 8.55 82.04 31 5.66 Yes 38 0.92 Yes 0 0 No -23 0.59 No 40 43.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 67262860 + NM_001318217 TMEM208 1 0.39 0.57 27 4.99 75.36 39 7.48 Yes 26 2.45 Yes 21 0.81 Yes -38 0.85 Yes 32 93.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 129809032 - NM_001301163 TMEM209 1 0.42 0.28 15 4.74 84.41 29 5.65 Yes 23 0.5 No 0 0 No -28 0.66 Yes 45 70.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 129813535 - NM_001301163 TMEM209 1 1.12 1.26 50 6.93 84.9 24 4.39 No 49 0.47 No 0 0 No -28 0.73 Yes 42 66.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 129813742 - NM_001301163 TMEM209 1 0.07 0.1 7 6.6 83.56 36 4.7 No 57 1.25 Yes 0 0 No -32 0.64 No 38 84.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 129822123 - NM_001301163 TMEM209 1 0.08 0.11 7 10.69 99.37 24 5.28 No 11 0.78 Yes 0 0 No -23 0.79 Yes 47 86.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 129823585 - NM_001301163 TMEM209 1 0.19 0.24 15 7.87 86.24 17 5.18 No 4 0.34 No 0 0 No -29 0.62 No 41 47.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 129831880 - NM_001301163 TMEM209 1 0.14 0.15 7 7.46 92.74 20 4.67 No 7 0.84 Yes 0 0 No -23 0.58 No 47 59.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 129840922 - NM_001301163 TMEM209 1 0.19 0.22 12 3.01 0 45 8.87 Yes 57 1.67 Yes 0 0 No -44 0.71 Yes 26 85.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 129841165 - NM_001301163 TMEM209 1 2.95 3.49 66 9.9 83.32 27 6.04 Yes -4 1.09 Yes 0 0 No -27 0.61 No 44 75.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 129843945 - NM_001301163 TMEM209 1 0.24 0.14 8 1.34 0 11 3.87 No 21 0.99 Yes 0 0 No -33 0.92 Yes 37 90.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27258015 + NM_017727 TMEM214 1 0.09 0.13 8 -1.18 68.71 22 4.69 No 43 -2.58 No 0 0 No -55 0.88 Yes 15 90.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 27258446 + NM_017727 TMEM214 1 0.55 0.88 41 -8.82 67.88 9 3.38 No -4 0.6 No 23 0.94 Yes -38 0.47 No 39 36.02 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 27258474 + NM_017727 TMEM214 1 0.16 0.25 14 4.58 84.13 16 4.69 No 54 -2.78 No 0 0 No -36 0.44 No 34 42.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27258578 + NM_017727 TMEM214 1 0.13 0.22 14 0.34 63.4 28 6.78 Yes 15 1.24 Yes 0 0 No -27 0.94 Yes 43 93.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27260435 + NM_017727 TMEM214 1 0.04 0.11 7 1.49 0 14 4 No 25 0.77 No 0 0 No -44 0.84 Yes 26 91.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 27260657 + NM_017727 TMEM214 1 2.05 3.92 67 6.42 86.02 22 4.9 No 9 1.24 Yes 21 0.97 Yes -21 0.85 Yes 49 94.81 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 27260682 + NM_017727 TMEM214 1 1.96 3.93 67 1.67 0 15 4.57 No 34 1.27 Yes 29 0.77 Yes -20 0.39 No 24 41.15 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 27260899 + NM_017727 TMEM214 1 1.05 2.24 45 10.39 79.94 23 6 Yes 10 1.19 Yes 22 0.89 Yes -22 0.91 Yes 48 90.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 27261575 + NM_017727 TMEM214 1 0.29 0.54 31 -2.32 0 11 3.87 No 20 0.92 Yes 26 0.92 Yes -32 0.89 Yes 38 83.24 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 27262187 + NM_017727 TMEM214 1 0.1 0.15 10 9.39 93.23 25 5 No 44 1.49 Yes 23 0.58 Yes -24 0.61 No 46 79.76 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 27262583 + NM_017727 TMEM214 1 0.31 0.53 29 9.69 82.8 26 5.65 Yes -3 1.79 Yes 22 0.98 Yes -25 0.5 No 45 71.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 27263218 + NM_017727 TMEM214 1 0.47 0.89 42 0.72 0 16 3.87 No 19 2.34 Yes 0 0 No -31 0.82 Yes 39 84.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 27263287 + NM_017727 TMEM214 1 0.39 0.76 31 9.58 88.7 28 5.48 No 36 0.46 No 0 0 No -27 0.79 Yes 43 81.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61160235 + NM_016499 TMEM216 1 1.56 0.15 9 5.97 76.01 23 4.92 No 10 1.15 Yes 0 0 No -22 0.86 Yes 48 87.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61165199 + NM_016499 TMEM216 1 1.96 0.81 41 6.27 81.71 61 6.87 Yes 48 0.56 No 29 0.62 Yes -29 0.77 Yes 41 81.09 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 124971153 - NM_001258241 TMEM218 1 10.8 3.26 72 3.6 69.09 55 7.47 Yes 42 1.27 Yes 29 0.63 Yes -54 0.72 Yes 16 87.17 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 124971153 - NM_001258241 TMEM218 1 0.38 0.14 7 3.6 69.09 55 7.47 Yes 42 1.27 Yes 29 0.63 Yes -54 0.72 Yes 16 87.17 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 124971418 - NM_001258241 TMEM218 1 1.72 0.56 26 7.97 84.93 31 4.66 No 37 -2.23 No 30 0.39 Yes -30 0.25 No 45 28.5 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 124972248 - NM_001258241 TMEM218 1 14.03 2.99 70 1 0 40 5.45 No -2 0.11 No 31 0.74 Yes -31 0.43 No 60 28.15 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 29973711 + NM_194280 TMEM219 1 0.73 0.14 9 10.27 90.06 64 8.76 Yes 51 1.36 Yes 0 0 No -27 0.41 No 43 67.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 29974427 + NM_194280 TMEM219 1 66.44 16.46 72 10.11 85.46 42 6.78 Yes 51 1.46 Yes 22 0.68 Yes -22 0.52 No 48 65.45 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 29983362 + NM_194280 TMEM219 1 8.85 4.61 66 4.22 66.92 38 6.31 Yes 70 0.52 No 22 0.67 Yes -35 0.35 No 35 62.23 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 27657475 + NM_032125 TMEM222 1 13.79 9.63 72 12.82 94.16 29 6.03 Yes 27 1.92 Yes 28 0.93 Yes -28 0.9 Yes 42 86.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 27657731 + NM_032125 TMEM222 1 0.16 0.1 7 2.84 0 19 4.58 No 58 1.23 Yes 0 0 No -18 0.64 No 52 36.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 27658937 + NM_032125 TMEM222 1 0.25 0.19 12 8.37 81.14 25 4.98 No 67 -3.43 No 24 0.77 Yes -24 0.85 Yes 46 90.93 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 27661157 + NM_032125 TMEM222 1 3.46 3.08 64 7.65 83.59 16 3.56 No 0 1.25 Yes 18 0.72 Yes -18 0.81 Yes 52 81.4 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 5084137 - NM_001009925 TMEM230 1 0.09 0.24 13 7.71 84.82 25 7.47 Yes 72 1.05 Yes 0 0 No -24 0.87 Yes 46 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 5086869 - NM_001009925 TMEM230 1 2.35 7.32 70 8.92 85.61 26 8 Yes 13 0.39 No 0 0 No -25 0.94 Yes 45 92.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5086956 - NM_001009925 TMEM230 1 0.04 0.13 8 -10.29 0 42 7.77 Yes 29 1.9 Yes 0 0 No -41 0.7 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 5089569 - NM_001009925 TMEM230 1 0.04 0.11 7 5.1 81.29 22 5.04 No -2 0.6 No 0 0 No -21 0.81 Yes 49 63.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 5091821 - NM_001009925 TMEM230 1 0.17 0.26 16 9.42 96.76 35 7.31 Yes 66 0.03 No 0 0 No -34 0.44 No 36 60.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5092252 - NM_001009925 TMEM230 1 4.61 6.82 58 12.22 88.27 45 9.43 Yes 32 1.91 Yes 44 0.62 Yes -44 0.76 Yes 26 85.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 5092455 - NM_001009925 TMEM230 1 0.58 0.88 42 7.62 80.79 23 4.9 No 64 0.4 No 23 0.37 Yes -23 0.51 No 47 46.63 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 75574082 - NM_001077418 TMEM231 1 4.96 0.32 19 -4.53 0 58 7.96 Yes -2 1.03 Yes 19 0.74 Yes -27 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 75574555 - NM_001077418 TMEM231 1 4.5 0.18 10 6.83 77.2 30 6.63 Yes 42 0.25 No 0 0 No -29 0.74 Yes 41 88.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 75579976 - NM_001077418 TMEM231 1 13.84 0.58 32 10.52 83.99 34 4.8 No 21 1.45 Yes 25 0.89 Yes -25 0.62 No 45 90.52 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 32682726 - NR_133636 TMEM234 1 2.67 0.39 22 12.28 88.36 40 6.75 Yes 63 -0.66 No 21 0.53 Yes -24 0.61 No 49 57.39 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 202499617 - NM_152388 TMEM237 1 1 0.31 18 8.16 82.56 18 4.68 No 5 1.07 Yes 32 0.46 Yes -39 0.5 No 38 40.28 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 20878965 - NM_001318834 TMEM241 1 1.66 0.33 22 2.05 86.58 23 3.69 No 75 0.59 No 0 0 No -22 0.8 Yes 48 81.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 20880717 - NM_001318834 TMEM241 1 2.27 0.46 24 6.8 97.45 23 3.55 No 27 1.43 Yes 0 0 No -20 0.79 Yes 50 96.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 20914066 - NM_001318834 TMEM241 1 4.5 1.01 41 12.47 94.98 42 6.62 Yes 29 0.1 No 0 0 No -26 0.66 Yes 44 82.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 20931959 - NM_001318834 TMEM241 1 5.05 1.14 45 8.73 88.07 37 4.99 No 64 1.59 Yes 0 0 No -28 0.47 No 42 62.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 20934300 - NM_001318834 TMEM241 1 1.19 0.32 19 7.28 85.02 38 7.07 Yes 25 1.83 Yes 0 0 No -37 0.94 Yes 33 95.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 20941666 - NM_001318834 TMEM241 1 0.55 0.13 8 13.55 90.87 24 6.85 Yes 11 1.53 Yes 0 0 No -23 0.95 Yes 47 91.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 20953783 - NM_001318834 TMEM241 1 4.99 0.14 10 7.57 77.37 37 5.61 Yes 4 0.97 Yes 0 0 No -22 0.53 No 48 72.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 20993556 - NM_001318834 TMEM241 1 1.03 0.14 8 9.8 89.47 32 8.65 Yes 19 1.85 Yes 0 0 No -31 0.82 Yes 39 94.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 21004817 - NM_001318834 TMEM241 1 0.5 0.11 8 8.55 86.91 30 5.82 Yes 24 1.38 Yes 0 0 No -29 0.8 Yes 41 72.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 21010664 - NM_001318834 TMEM241 1 0.56 0.11 8 2.15 74.52 27 5.73 Yes 54 0.09 No 20 0.42 Yes -26 0.65 No 44 81.56 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 157725331 - NM_018452 TMEM242 1 0.16 0.11 7 6.73 86.16 20 7.14 Yes 7 1.24 Yes 0 0 No -19 0.68 Yes 51 81.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 157739046 - NM_018452 TMEM242 1 0.73 0.51 24 2.99 76 91 8.95 Yes 44 0.93 Yes 0 0 No -21 0.5 No 14 55.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 86836059 - NM_001329472 TMEM243 1 0.1 0.32 17 6.65 85.96 23 4.74 No 10 1.18 Yes 0 0 No -22 0.89 Yes 48 84.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 86846950 - NM_001329472 TMEM243 1 0.04 0.14 9 7.9 82.08 25 5.28 No 12 0.94 Yes 0 0 No -31 0.56 No 39 62.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 111812674 - NM_032012 TMEM245 1 1.26 1.92 58 5.54 80.17 24 6.27 Yes 11 1.73 Yes 0 0 No -23 0.83 Yes 47 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 111841224 - NM_032012 TMEM245 1 0.12 0.14 9 3.07 74.51 55 7.1 Yes 42 1.01 Yes 0 0 No -44 0.72 Yes 26 85.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 111853433 - NM_032012 TMEM245 1 11.38 9.68 72 2.3 76.28 38 8.89 Yes 25 1.31 Yes 0 0 No -37 0.9 Yes 33 93.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66387132 + NM_017994 TMEM248 1 1.17 0.5 22 -1.57 0 19 4.46 No 13 0.91 Yes 21 0.91 Yes -18 0.83 Yes 52 70.4 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 66387135 + NM_017994 TMEM248 1 4.04 1.67 55 2.86 86.73 22 4.78 No 16 0.91 Yes 21 0.91 Yes -21 0.86 Yes 49 74.26 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 66392628 + NM_017994 TMEM248 1 1.28 0.5 23 12.22 92.63 30 6.22 Yes 27 1.07 Yes 0 0 No -29 0.68 Yes 41 78.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66413967 + NM_017994 TMEM248 1 0.12 0.36 18 9.69 93.28 21 5 No 8 0.34 No 0 0 No -20 0.91 Yes 50 93.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 66415942 + NM_017994 TMEM248 1 0.13 0.36 21 2.32 0 39 6.71 Yes 26 1.29 Yes 0 0 No -38 0.83 Yes 32 92.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66418253 + NM_017994 TMEM248 1 0.04 0.13 7 2.96 72.38 38 5.15 No 53 1.45 Yes 0 0 No -26 0.82 Yes 44 74.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66418464 + NM_017994 TMEM248 1 0.06 0.17 8 3.25 78.93 43 6.36 Yes 24 0.23 No 0 0 No -36 0.56 No 34 80.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 66420725 + NM_017994 TMEM248 1 0.09 0.26 13 3.76 73.99 27 7 Yes 14 0.95 Yes 0 0 No -30 0.33 No 41 48.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 81845986 + NM_001270374 TMEM254 1 40.02 6.17 72 8.33 81.79 24 5.11 No 11 0 No 24 0.88 Yes -24 0.86 Yes 46 92.93 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 81850135 + NM_001270374 TMEM254 1 13.27 2.13 60 11.8 90.58 30 5.65 Yes 25 1.14 Yes 29 0.7 Yes -25 0.53 No 45 76.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 61556950 - NM_014206 TMEM258 1 0.11 1 48 5.37 77.08 25 6.31 Yes -2 -0.79 No 0 0 No -24 0.75 Yes 46 88.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 61557387 - NM_014206 TMEM258 1 0.02 0.21 12 -10.78 0 10 4 No 10 -1.31 No 0 0 No -21 0.74 Yes 49 68.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 61557393 - NM_014206 TMEM258 1 0.05 0.58 29 -16.95 0 16 6.76 Yes 3 0.21 No 0 0 No -16 0.64 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1011132 - NM_001033026 TMEM259 1 0.09 0.18 13 -6.12 0 26 7.62 Yes 65 1.88 Yes 21 0.84 Yes -48 0.47 No 15 36.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 1011137 - NM_001033026 TMEM259 1 0.2 0.42 24 3.69 70.28 21 7.34 Yes 60 1.89 Yes 21 0.84 Yes -43 0.48 No 26 38.84 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 1011612 - NM_001033026 TMEM259 1 13.32 29.56 72 8.6 80.75 26 6.08 Yes 68 1.67 Yes 25 0.53 Yes -24 0.48 No 46 60.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 1011649 - NM_001033026 TMEM259 1 0.1 0.19 11 1.52 76.9 22 4.8 No 31 1.67 Yes 24 0.29 Yes -43 0.94 Yes 27 86.59 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1012171 - NM_001033026 TMEM259 1 0.21 0.31 17 -0.67 58.67 26 5.09 No 21 1.48 Yes 0 0 No -38 0.48 No 41 41.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1012508 - NM_001033026 TMEM259 1 0.62 1.47 49 7.84 88.24 32 5.74 Yes 19 0.55 No 0 0 No -31 0.94 Yes 39 95.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1013358 - NM_001033026 TMEM259 1 1.77 5.96 71 3.89 78.64 31 5.92 Yes -4 1.3 Yes 30 0.9 Yes -30 0.9 Yes 40 38.42 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 1013384 - NM_001033026 TMEM259 1 0.08 0.29 12 2.75 76.57 18 4.9 No 44 0.86 Yes 30 0.9 Yes -17 0.61 No 53 58.98 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 1013399 - NM_001033026 TMEM259 1 0.66 2.19 63 0.5 81.59 20 4.2 No 29 0.86 Yes 30 0.9 Yes -19 0.54 No 51 58.69 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 1013413 - NM_001033026 TMEM259 1 0.08 0.26 16 4.54 88.3 20 5.1 No 15 0.86 Yes 0 0 No -21 0.63 No 43 77.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1013416 - NM_001033026 TMEM259 1 0.06 0.19 9 2.67 75.15 17 4.8 No 12 0.87 Yes 0 0 No -24 0.7 Yes 46 84.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1014317 - NM_001033026 TMEM259 1 0.1 0.33 19 9.21 84.73 30 5.55 No 62 -2.66 No 24 0.61 Yes -24 0.78 Yes 46 78.83 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 57059832 + NM_017799 TMEM260 1 8.14 1.1 41 9.25 79.74 30 7.75 Yes 17 1.18 Yes 29 0.84 Yes -29 0.78 Yes 41 80.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 57078937 + NM_017799 TMEM260 1 0.66 0.21 13 5.73 80.28 26 4.82 No 41 -4.8 No 27 0.49 Yes -24 0.38 No 42 84.64 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 57080115 + NM_017799 TMEM260 1 1.54 0.46 26 5.75 68.96 30 7.65 Yes 60 0.63 No 0 0 No -29 0.61 No 41 63.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 57086075 + NM_017799 TMEM260 1 9.64 1.83 59 10.48 88.27 30 5.71 Yes 75 0.58 No 26 0.6 Yes -26 0.7 Yes 44 75.24 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 57087289 + NM_017799 TMEM260 1 1.03 0.15 7 8.16 95.84 21 5.84 Yes 8 0.53 No 0 0 No -31 0.81 Yes 39 74.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 57087557 + NM_017799 TMEM260 1 0.73 0.14 8 9.66 85.79 35 8.45 Yes 22 1.46 Yes 0 0 No -34 0.84 Yes 36 90.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 57091379 + NM_017799 TMEM260 1 1.61 0.28 16 6.09 87.48 13 4.49 No 13 -0.94 No 0 0 No -18 0.37 No 54 46.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 57101839 + NM_017799 TMEM260 1 9.29 2.61 59 3.46 72.16 24 6.54 Yes 33 0.35 No 0 0 No -23 0.88 Yes 47 91.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 107352573 + NM_001319662 TMEM263 1 0.2 0.15 10 5.97 86.29 34 5.92 Yes 51 1.01 Yes 0 0 No -33 0.78 Yes 37 91.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 107353047 + NM_001319662 TMEM263 1 1.67 1.28 52 -9.73 76.09 31 4.89 No 34 0.35 No 30 0.77 Yes -30 0.76 Yes 40 71.61 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 107353065 + NM_001319662 TMEM263 1 2.94 2.33 62 3.89 84.17 27 5.2 No 52 0.36 No 26 0.8 Yes -26 0.55 No 22 63.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 107361060 + NM_001319662 TMEM263 1 1.11 1.68 53 1.92 0 28 5.36 No 35 1.7 Yes 27 0.87 Yes -27 0.85 Yes 43 88.01 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 107363122 + NM_001319662 TMEM263 1 0.12 0.21 14 7.61 86.19 20 5.34 No 7 1 Yes 0 0 No -23 0.43 No 43 53.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 107363215 + NM_001319662 TMEM263 1 0.2 0.29 16 4.79 71.81 34 7.2 Yes 21 2.03 Yes 0 0 No -33 0.64 No 37 77.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 107364399 + NM_001319662 TMEM263 1 0.12 0.17 11 5 86.94 22 4.8 No 28 0.36 No 0 0 No -24 0.47 No 46 39.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 43454708 - NM_022483 TMEM267 1 2.07 0.38 24 5.92 90.44 43 6.94 Yes 50 1.14 Yes 42 0.25 Yes -45 0.66 No 28 72.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 43476588 - NM_022483 TMEM267 1 0.87 0.15 11 1.43 0 28 1.81 No 66 0.59 No 0 0 No -25 0.22 No 14 8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 43476592 - NM_022483 TMEM267 1 1.19 0.18 11 4.59 78.29 28 1.66 No 62 0.59 No 0 0 No -21 0.2 No 18 6.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 43480090 - NM_022483 TMEM267 1 15.76 2.81 61 9.86 94.5 19 6.21 Yes 6 1.44 Yes 27 0.52 Yes -28 0.57 No 42 61.25 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 117384582 + NM_153045 TMEM268 1 3.81 1.42 51 5.71 77.06 41 6.5 Yes 28 1.19 Yes 0 0 No -40 0.92 Yes 30 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 117386415 + NM_153045 TMEM268 1 6.72 2.28 58 6.27 76.46 26 6.57 Yes 13 -1.72 No 25 0.83 Yes -25 0.89 Yes 45 85.42 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 117389175 + NM_153045 TMEM268 1 3.95 1.44 56 3.13 66.53 27 8 Yes 68 1.52 Yes 26 0.9 Yes -26 0.81 Yes 44 93.16 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 117404945 + NM_153045 TMEM268 1 1.34 0.4 21 7.47 87.44 22 5.64 Yes 9 0.46 No 0 0 No -21 0.52 No 49 42.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 117407479 + NM_153045 TMEM268 1 0.46 0.15 9 7.4 83.54 37 6.4 Yes 24 1.08 Yes 0 0 No -36 0.69 Yes 34 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 75966023 - NM_018247 TMEM30A 1 0.12 0.6 30 -8.1 0 26 5.2 No 13 0.36 No 25 0.52 Yes -25 0.89 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 75966043 - NM_018247 TMEM30A 1 0.1 0.51 29 -6.06 0 17 3.92 No 5 -2.38 No 25 0.52 Yes -37 0.59 No 27 37.46 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 75966050 - NM_018247 TMEM30A 1 0.03 0.15 11 -1.44 69.49 37 8.04 Yes 71 -4.11 No 25 0.52 Yes -30 0.72 Yes 34 55.94 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 75969141 - NM_018247 TMEM30A 1 0.52 1.93 52 -4.69 0 37 6.16 Yes 24 1.02 Yes 0 0 No -46 0.65 No 24 70.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 75969145 - NM_018247 TMEM30A 1 0.13 0.49 25 0.3 65.71 33 5.97 Yes 74 1.37 Yes 0 0 No -26 0.48 No 28 79.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 75977484 - NM_018247 TMEM30A 1 0.04 0.18 11 -9.5 0 14 4 No 56 0.16 No 21 0.67 Yes -13 0.58 No 39 53.4 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 75982672 - NM_018247 TMEM30A 1 0.09 0.43 22 8.07 96.06 31 4.68 No 25 1.43 Yes 0 0 No -25 0.54 No 45 53.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 41938059 + NM_018126 TMEM33 1 0.24 0.32 20 7.2 77.28 26 4.57 No -1 0.67 No 0 0 No -25 0.53 No 45 82.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 41939211 + NM_018126 TMEM33 1 0.12 0.22 12 5.31 82.41 16 5.05 No -1 0.54 No 0 0 No -22 0.47 No 48 55.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 41945778 + NM_018126 TMEM33 1 0.13 0.4 22 -1.28 0 14 4.46 No 17 0.88 Yes 0 0 No -42 0.37 No 41 52.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 41955776 + NM_018126 TMEM33 1 0.58 1.35 46 6.94 85.32 30 4.66 No 14 0.5 No 29 0.74 Yes -29 0.84 Yes 41 84.37 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 41956066 + NM_018126 TMEM33 1 0.03 0.11 8 6.8 79.47 37 4.99 No 24 0.31 No 24 0.94 Yes -36 0.47 No 34 64.96 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 108464987 + NM_018112 TMEM38B 1 1.79 0.49 26 7.25 93.61 42 3.85 No 61 1.31 Yes 29 0.74 Yes -29 0.76 Yes 41 78.79 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 108469127 + NM_018112 TMEM38B 1 0.61 0.33 20 7.12 84.57 46 6.86 Yes 56 1.06 Yes 0 0 No -45 0.51 No 25 60.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 108476646 + NM_018112 TMEM38B 1 3.97 2.03 64 6.92 83.67 67 8.23 Yes 29 1.94 Yes 0 0 No -25 0.62 No 29 53.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 108511353 + NM_018112 TMEM38B 1 2.06 1.57 55 6.53 92.52 30 5.6 Yes 9 0.66 No 29 0.9 Yes -29 0.79 Yes 41 82.35 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 108511356 + NM_018112 TMEM38B 1 0.93 0.75 31 3.61 82.52 33 5.81 Yes 12 0.67 No 29 0.9 Yes -32 0.66 Yes 38 77.45 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 108533873 + NM_018112 TMEM38B 1 0.22 0.17 10 9.01 92.6 50 6.97 Yes 37 1.27 Yes 0 0 No -29 0.87 Yes 41 87.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119154419 - NR_073506 TMEM39A 1 0.29 0.18 12 7.27 81.37 31 5.74 Yes 18 0.97 Yes 0 0 No -30 0.81 Yes 40 87.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119154783 - NR_073506 TMEM39A 1 2.58 1.53 56 7.21 75.66 42 6.78 Yes 53 1.76 Yes 27 0.56 Yes -27 0.72 Yes 43 71.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 119156497 - NR_073506 TMEM39A 1 1.23 0.9 39 7.4 81.19 32 10.26 Yes 19 1.11 Yes 0 0 No -31 0.75 Yes 39 82.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 119176931 - NR_073506 TMEM39A 1 0.21 0.19 10 6.56 88.5 45 7.82 Yes 62 1.68 Yes 30 0.63 Yes -30 0.88 Yes 40 93.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 119177032 - NR_073506 TMEM39A 1 1.33 1.11 43 5.53 85.37 20 4.83 No 64 0.94 Yes 19 0.71 Yes -19 0.64 No 48 61.24 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 119177101 - NR_073506 TMEM39A 1 0.26 0.17 9 -0.18 0 13 4.36 No 23 0.34 No 20 0.9 Yes -20 0.58 No 50 52.66 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 119180544 - NR_073506 TMEM39A 1 0.22 0.19 12 6.31 85.58 39 6.34 Yes 18 1.02 Yes 0 0 No -30 0.72 Yes 40 55.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 119180952 - NR_073506 TMEM39A 1 22.57 11.88 72 4.35 80.44 30 5.15 No 60 1.19 Yes 29 0.83 Yes -19 0.71 Yes 41 44.3 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 119181250 - NR_073506 TMEM39A 1 0.25 0.15 9 8.38 80.76 42 6.7 Yes 29 1.02 Yes 0 0 No -30 0.45 No 41 49.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 32540543 + NM_018056 TMEM39B 1 2.47 0.72 30 -5.36 76.31 21 5.2 No 59 0.47 No 28 0.56 Yes -20 0.78 Yes 50 79.33 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 32541267 + NM_018056 TMEM39B 1 1.92 0.93 38 7.54 87.49 20 5.32 No 76 1.79 Yes 24 0.6 Yes -26 0.36 No 43 57.36 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 32541732 + NM_018056 TMEM39B 1 2.16 0.21 13 3.97 84.41 54 7.62 Yes 41 1.38 Yes 0 0 No -53 0.77 Yes 17 88.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32561260 + NM_018056 TMEM39B 1 4.95 2.32 63 6.27 81.21 28 7.6 Yes 15 1.41 Yes 27 0.94 Yes -27 0.67 Yes 43 88.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 32566341 + NM_018056 TMEM39B 1 1.65 0.76 37 4.76 77.86 23 6.16 Yes -1 -0.93 No 0 0 No -23 0.41 No 47 36.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 32566672 + NM_018056 TMEM39B 1 1.81 0.88 39 5.5 79.81 23 4.9 No 29 -2.45 No 0 0 No -22 0.65 No 48 71.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 32567715 + NM_018056 TMEM39B 1 0.31 0.18 10 6.29 81.96 19 6.27 Yes 54 0.57 No 0 0 No -26 0.78 Yes 44 78.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 32568042 + NM_018056 TMEM39B 1 0.35 0.18 12 3 0 20 4.47 No 25 -0.81 No 0 0 No -19 0.74 Yes 33 70.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44903844 + NM_144638 TMEM42 1 3.59 0.4 20 2.43 71.17 23 6.33 Yes 10 0.72 No 0 0 No -22 0.94 Yes 48 83.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44903849 + NM_144638 TMEM42 1 15.54 1.47 59 4.08 0 28 6.68 Yes 15 0.7 No 0 0 No -27 0.93 Yes 43 79.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44903891 + NM_144638 TMEM42 1 1.16 0.14 8 7.68 92.38 20 5.1 No 7 0.87 Yes 0 0 No -19 0.83 Yes 51 80.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 44905713 + NM_144638 TMEM42 1 2.79 0.22 10 5.03 81.99 23 5.38 No 29 1.49 Yes 0 0 No -19 0.68 Yes 48 72.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 44906626 + NM_144638 TMEM42 1 22.76 5.75 71 5.68 80.9 30 5.43 No -4 0.87 Yes 0 0 No -29 0.91 Yes 41 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 44906752 + NM_144638 TMEM42 1 0.73 0.18 10 5.81 69.18 20 6.32 Yes 34 -3.53 No 0 0 No -19 0.83 Yes 51 80.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 14170354 + NM_024334 TMEM43 1 2.19 1.58 53 0.92 79.22 23 4.9 No 10 0.18 No 22 0.91 Yes -22 0.96 Yes 48 95.55 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 14172386 + NM_024334 TMEM43 1 0.37 0.24 16 8.58 80.71 32 6.16 Yes 19 0.41 No 0 0 No -31 0.81 Yes 39 90.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 14177327 + NM_024334 TMEM43 1 0.52 0.43 24 7.03 77.53 27 5.46 No 29 1.47 Yes 0 0 No -26 0.92 Yes 44 91.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 14177901 + NM_024334 TMEM43 1 0.18 0.1 7 5.13 81.27 20 5.32 No 2 0.2 No 0 0 No -19 0.75 Yes 51 62.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 194331807 - NM_001166305 TMEM44 1 2.74 0.18 11 6.16 75.86 14 6.32 Yes 1 1.41 Yes 0 0 No -24 0.49 No 46 41.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 100289452 + NM_018004 TMEM45A 1 6.97 0.76 36 9.68 83.92 28 5.48 No 15 0.66 No 27 0.61 Yes -27 0.5 No 43 48.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 64176320 + NM_014254 TMEM5 1 19.36 15.25 72 10.47 79.33 22 6.6 Yes 9 1.84 Yes 27 0.89 Yes -27 0.84 Yes 43 89.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 64178161 + NM_014254 TMEM5 1 0.42 0.33 18 9.07 86.08 24 5.72 Yes 11 1.49 Yes 0 0 No -23 0.79 Yes 47 89.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 64180582 + NM_014254 TMEM5 1 0.76 0.68 30 7.25 83.22 30 6.63 Yes 53 1.27 Yes 0 0 No -24 0.87 Yes 46 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 64183593 + NM_014254 TMEM5 1 0.5 0.49 27 -1.89 61 24 6.56 Yes 8 0.57 No 0 0 No -23 0.79 Yes 36 64.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 64183667 + NM_014254 TMEM5 1 6.69 6.28 71 1.73 68.61 45 6.71 Yes 32 1.3 Yes 0 0 No -22 0.55 No 26 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 64184098 + NM_014254 TMEM5 1 1.52 1.39 50 9.41 82.94 13 5.14 No 0 1.15 Yes 26 0.43 Yes -26 0.77 Yes 44 90.16 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 64195829 + NM_014254 TMEM5 1 0.14 0.13 7 4.28 86.63 22 6.22 Yes 9 1.03 Yes 43 0.41 Yes -21 0.84 Yes 49 79.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 64202434 + NM_014254 TMEM5 1 0.31 0.38 19 -4.71 0 16 4.51 No 52 0.86 Yes 24 0.49 Yes -19 0.89 Yes 51 63.11 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 25669452 + NM_014313 TMEM50A 1 0.03 0.11 8 -11.96 0 31 5.1 No 63 0.91 Yes 0 0 No -23 0.95 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 25669461 + NM_014313 TMEM50A 1 0.03 0.11 7 5.26 0 13 4.36 No 72 0.91 Yes 0 0 No -32 0.89 Yes 38 94.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 25671468 + NM_014313 TMEM50A 1 0.05 0.19 14 9.99 87.07 17 8.1 Yes 4 1.01 Yes 0 0 No -26 0.46 No 43 39.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 25679450 + NM_014313 TMEM50A 1 0.04 0.14 10 -0.16 85.11 29 9.33 Yes 16 0.46 No 0 0 No -28 0.71 Yes 47 81.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 25683284 + NM_014313 TMEM50A 1 0.06 0.28 16 -15.64 0 32 5.92 Yes 36 0.83 Yes 0 0 No -23 0.45 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 25683285 + NM_014313 TMEM50A 1 0.04 0.17 11 -19.16 0 33 5.98 Yes 37 0.82 Yes 0 0 No -24 0.51 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 25688101 + NM_014313 TMEM50A 1 0.05 0.28 19 11.23 89.7 37 5.28 No 72 -2.16 No 0 0 No -32 0.53 No 38 62.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 25688118 + NM_014313 TMEM50A 1 0.03 0.17 10 8.2 92.79 20 5.1 No 76 -1.35 No 0 0 No -19 0.49 No 51 61.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 25688251 + NM_014313 TMEM50A 1 0.06 0.39 19 3.77 73.87 33 7.63 Yes 62 -1.85 No 0 0 No -28 0.61 No 42 47.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 34809300 - NR_040016 TMEM50B 1 45.46 3.19 63 8.18 94.52 20 4.9 No 67 -5.03 No 29 0.57 Yes -26 0.49 No 44 60.47 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr21 34809392 - NR_040016 TMEM50B 1 1.46 0.14 8 9.6 91.92 27 5.71 Yes -2 0.39 No 0 0 No -26 0.63 No 44 61.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 34819448 - NR_040016 TMEM50B 1 11.52 1.15 46 12.25 95.65 21 7.26 Yes 36 1.76 Yes 28 0.68 Yes -28 0.71 Yes 42 62.09 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr21 34821187 - NR_040016 TMEM50B 1 0.19 0.24 16 5.38 77.41 28 4.15 No 46 1.52 Yes 27 0.74 Yes -27 0.42 No 12 58.31 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 34821187 - NR_040016 TMEM50B 1 0.25 0.29 15 5.38 77.41 28 4.15 No 46 1.52 Yes 27 0.74 Yes -27 0.42 No 12 58.31 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 34821211 - NR_040016 TMEM50B 1 0.27 0.32 15 7.89 85.05 35 8.7 Yes 22 1.53 Yes 27 0.74 Yes -34 0.6 No 36 69.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr21 34825736 - NR_040016 TMEM50B 1 0.5 0.56 28 12.03 87.2 35 5.92 Yes 22 1.59 Yes 0 0 No -34 0.87 Yes 36 92.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 34828405 - NR_040016 TMEM50B 1 1.36 2.38 63 7.98 86.21 47 5.68 Yes 69 -2.68 No 32 0.65 Yes -32 0.91 Yes 38 92.58 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr21 34839420 - NR_040016 TMEM50B 1 0.09 0.13 7 4.5 0 13 4.01 No 17 0.89 Yes 0 0 No -29 0.64 No 41 77.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 34841991 - NR_040016 TMEM50B 1 0.6 0.4 18 8.85 87.65 17 5.78 Yes 4 0.08 No 28 0.61 Yes -19 0.32 No 51 56.1 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 92030739 - NM_018710 TMEM55A 1 0.78 0.53 28 5.99 82.21 30 5.92 Yes 37 0.92 Yes 0 0 No -29 0.69 Yes 41 80.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 92032423 - NM_018710 TMEM55A 1 2.29 0.81 36 4.91 81.98 21 6.32 Yes 8 0.97 Yes 0 0 No -20 0.66 No 50 78.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 92036595 - NM_018710 TMEM55A 1 8.64 2.56 66 8.55 82.63 25 5.57 Yes 9 0.88 Yes 24 0.68 Yes -24 0.65 No 46 70.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 92038403 - NM_018710 TMEM55A 1 1.18 0.35 16 8.41 90.63 22 5.05 No 9 0.75 No 0 0 No -21 0.63 No 49 61.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 20928449 - NM_144568 TMEM55B 1 0.27 0.22 14 -4.29 0 19 4.24 No 14 1.49 Yes 0 0 No -29 0.79 Yes 41 85.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 25817836 + NM_001282564 TMEM57 1 0.72 0.79 36 5.53 88.94 15 5.54 No 60 0.23 No 0 0 No -25 0.63 No 45 60.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 25817952 + NM_001282564 TMEM57 1 0.38 0.49 24 -0.01 70.49 16 4.69 No 53 -3.82 No 0 0 No -21 0.47 No 49 48.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 54497976 - NM_001305043 TMEM59 1 0.22 0.47 27 -0.27 77.68 28 6.56 Yes 15 1.35 Yes 0 0 No -27 0.86 Yes 43 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 54500444 - NM_001305043 TMEM59 1 0.05 0.13 8 10.75 87.44 24 7.6 Yes 11 1.77 Yes 0 0 No -23 0.72 Yes 47 63.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 54503448 - NM_001305043 TMEM59 1 0.06 0.13 8 -1.02 70.93 46 8.19 Yes 33 0.22 No 0 0 No -33 0.49 No 37 57.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 54506511 - NM_001305043 TMEM59 1 218.92 247.78 72 5.69 83.46 20 4.67 No 7 0.95 Yes 19 0.66 Yes -28 0.5 No 43 40.13 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 54514356 - NM_001305043 TMEM59 1 0.19 0.57 30 9.96 87.49 33 7.87 Yes 68 1.51 Yes 32 0.83 Yes -32 0.73 Yes 38 88.64 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 77423709 - NM_032936 TMEM60 1 0.25 0.13 8 6.16 72.72 35 6.4 Yes 40 1.28 Yes 0 0 No -34 0.91 Yes 36 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43431176 + NM_001347006 TMEM62 1 0.71 0.22 11 10.27 92.03 23 6.63 Yes 51 0.91 Yes 0 0 No -22 0.45 No 48 53.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43441305 + NM_001347006 TMEM62 1 3.36 1.63 55 8.52 90.44 31 8.77 Yes 18 1.77 Yes 30 0.81 Yes -30 0.85 Yes 40 86.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 43444023 + NM_001347006 TMEM62 1 3.52 1.13 14 3.77 68.96 39 4.97 No 52 1.06 Yes 0 0 No -38 0.39 No 32 54.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43444092 + NM_001347006 TMEM62 1 1.07 0.44 18 3.93 77.59 17 6.3 Yes 4 1.12 Yes 0 0 No -29 0.71 Yes 41 88.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43446105 + NM_001347006 TMEM62 1 1.61 0.54 24 6.52 87.08 23 7.11 Yes 10 0.85 Yes 0 0 No -22 0.65 No 48 70.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 43446910 + NM_001347006 TMEM62 1 0.89 0.28 15 5.26 84.73 49 6.92 Yes 36 0.74 No 0 0 No -23 0.94 Yes 47 95.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 43456742 + NM_001347006 TMEM62 1 3.65 1.38 50 9.04 87.82 22 5.74 Yes 9 1.19 Yes 0 0 No -21 0.85 Yes 49 90.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43462843 + NM_001347006 TMEM62 1 1.38 0.4 19 7.69 88.69 25 5.72 Yes 5 0.27 No 0 0 No -27 0.57 No 48 69.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 226036731 - NM_014698 TMEM63A 1 0.41 0.17 8 -1.17 0 41 6.48 Yes 73 -1.02 No 25 0.64 Yes -40 0.64 No 30 27.19 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 226037901 - NM_014698 TMEM63A 1 0.57 0.18 12 7.58 91.8 14 5.48 No 1 0.73 No 0 0 No -23 0.8 Yes 47 75.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226050048 - NM_014698 TMEM63A 1 0.28 0.11 7 -5.76 0 32 7.13 Yes 19 -0.82 No 0 0 No -26 0.43 No 39 55.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 226053751 - NM_014698 TMEM63A 1 0.95 0.31 19 7.84 93.32 24 6.24 Yes 11 1.32 Yes 23 0.89 Yes -23 0.85 Yes 47 81.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 226058050 - NM_014698 TMEM63A 1 1.15 0.36 19 11.34 95.65 26 5.66 Yes 56 1.62 Yes 0 0 No -26 0.68 Yes 44 75.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 226059559 - NM_014698 TMEM63A 1 0.38 0.14 9 2.18 67.02 20 5.48 No 62 -2.8 No 0 0 No -27 0.83 Yes 43 69.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 226062036 - NM_014698 TMEM63A 1 0.43 0.11 7 -0.99 68.79 27 6.37 Yes 69 0.86 Yes 0 0 No -27 0.8 Yes 43 70.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 226062039 - NM_014698 TMEM63A 1 2.2 0.39 20 2.58 81.29 24 6.13 Yes 66 0.87 Yes 0 0 No -24 0.81 Yes 46 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 44102582 + NM_018426 TMEM63B 1 0.76 0.31 18 6.66 84.47 31 6.63 Yes 18 2.31 Yes 0 0 No -30 0.9 Yes 40 94.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 44108051 + NM_018426 TMEM63B 1 0.22 0.14 9 6.88 81.41 59 8.44 Yes -1 1.03 Yes 0 0 No -43 0.68 Yes 27 69.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 44121818 + NM_018426 TMEM63B 1 0.47 0.24 15 -5.67 0 17 4.24 No 59 -2.9 No 0 0 No -37 0.87 Yes 33 77.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 94793085 + NM_001142301 TMEM67 1 1.11 0.13 8 4.11 71.86 37 5.78 Yes 24 0.52 No 22 0.82 Yes -36 0.66 No 34 72.18 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 94797960 + NM_001142301 TMEM67 1 9.34 0.75 37 8.82 95.88 26 5.31 No 13 0.22 No 25 0.85 Yes -25 0.93 Yes 45 94.04 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 94798495 + NM_001142301 TMEM67 1 3.02 0.26 14 1.2 69.89 20 6.08 Yes 7 1.53 Yes 0 0 No -19 0.88 Yes 51 90.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 94804109 + NM_001142301 TMEM67 1 6.75 0.65 31 2.79 83.95 15 7.11 Yes 2 0.93 Yes 28 0.93 Yes -37 0.74 Yes 33 76.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 94809336 + NM_001142301 TMEM67 1 1.51 0.14 9 8.28 90.48 19 5.6 Yes 6 0.75 No 27 0.73 Yes -18 0.51 No 51 65.58 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 56653764 - NM_001286657 TMEM68 1 0.15 0.21 12 5.41 90.92 28 4.25 No 3 0.8 Yes 0 0 No -27 0.63 No 43 57.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 56655651 - NM_001286657 TMEM68 1 1.02 1.38 46 -6.68 0 19 4.07 No 54 -5.06 No 0 0 No -19 0.7 Yes 51 42.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 56661448 - NM_001286657 TMEM68 1 0.68 0.85 32 4.13 76.47 28 5.66 Yes 15 0.73 No 0 0 No -25 0.58 No 45 75.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 56662241 - NM_001286657 TMEM68 1 0.12 0.17 9 7.58 82.31 28 5.96 Yes 52 0.41 No 0 0 No -23 0.77 Yes 47 76.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 56676261 - NM_001286657 TMEM68 1 0.53 0.68 28 8.25 93.68 19 5.74 Yes 6 1.21 Yes 24 0.66 Yes -18 0.45 No 52 60.23 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 46156677 + NM_016486 TMEM69 1 0.67 0.97 38 2.09 69.78 20 4.69 No 7 1.22 Yes 0 0 No -19 0.89 Yes 51 90.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42505468 - NM_015497 TMEM87A 1 0.32 0.44 22 8.6 80.56 22 4.47 No 58 0.56 No 0 0 No -22 0.57 No 38 55.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42510051 - NM_015497 TMEM87A 1 0.85 1.01 36 6.79 72.27 64 6.92 Yes 51 0.38 No 26 0.82 Yes -29 0.74 Yes 41 82.05 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 42510574 - NM_015497 TMEM87A 1 3.4 3.47 69 6.23 88.67 29 5.61 Yes 56 0.74 No 0 0 No -28 0.8 Yes 42 87.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42511838 - NM_015497 TMEM87A 1 0.56 0.69 30 1.96 81.78 32 5.83 Yes 59 1.09 Yes 0 0 No -31 0.68 Yes 39 75.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42515922 - NM_015497 TMEM87A 1 0.2 0.13 9 11.16 85.86 25 6.76 Yes 12 0.97 Yes 0 0 No -24 0.65 No 42 71.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 42524114 - NM_015497 TMEM87A 1 2.86 2.64 63 5.7 75.37 44 7.72 Yes 31 1.47 Yes 27 0.86 Yes -33 0.53 No 27 43.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 42528594 - NM_015497 TMEM87A 1 0.28 0.19 13 7.32 91.49 29 5.29 No 16 -0.47 No 0 0 No -28 0.69 Yes 42 49.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 42528613 - NM_015497 TMEM87A 1 0.13 0.1 7 3.13 0 37 6.92 Yes -3 -0.69 No 0 0 No -28 0.68 Yes 42 81.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42550597 - NM_015497 TMEM87A 1 0.35 0.42 21 7.58 84.47 24 6.16 Yes 11 0.22 No 0 0 No -23 0.97 Yes 47 95.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42551189 - NM_015497 TMEM87A 1 3.18 3.47 67 8.46 84.52 22 5.2 No 9 0.71 No 21 0.84 Yes -21 0.89 Yes 49 90.56 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 112823273 + NM_032824 TMEM87B 1 0.38 0.17 9 8.39 80.41 27 5.46 No 54 0.38 No 0 0 No -26 0.94 Yes 44 94.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 112835272 + NM_032824 TMEM87B 1 0.31 0.29 16 8.09 88.31 19 6.34 Yes 6 0.28 No 0 0 No -26 0.51 No 44 42.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112852804 + NM_032824 TMEM87B 1 0.86 0.78 30 11.33 95.39 140 12.08 Yes NA NA NA 0 0 No -70 0.03 No 10 10.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112853825 + NM_032824 TMEM87B 1 0.16 0.15 10 8.57 96.53 20 4.87 No 19 0.81 Yes 0 0 No -20 0.49 No 50 68.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 112854788 + NM_032824 TMEM87B 1 0.22 0.13 8 7.79 81.92 29 5.28 No 63 1.47 Yes 25 0.87 Yes -28 0.64 No 42 65.71 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 422749 - NM_021259 TMEM8A 1 0.32 0.31 19 0.22 0 17 4.58 No 4 0.46 No 23 0.52 Yes -16 0.66 Yes 54 54.03 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 424131 - NM_021259 TMEM8A 1 0.11 0.13 9 1.3 66.1 26 5.48 No 26 1.23 Yes 0 0 No -23 0.33 No 32 35.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 424966 - NM_021259 TMEM8A 1 0.61 0.65 32 5.45 79.56 25 6.7 Yes 12 1.72 Yes 0 0 No -24 0.9 Yes 46 89.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 424966 - NM_021259 TMEM8A 1 0.13 0.13 9 5.45 79.56 25 6.7 Yes 12 1.72 Yes 0 0 No -24 0.9 Yes 46 89.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35832596 + NM_001042590 TMEM8B 1 2.29 0.26 15 8.87 80.43 40 5.83 Yes 72 0.27 No 0 0 No -37 0.77 Yes 33 79.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35834527 + NM_001042590 TMEM8B 1 7.96 0.86 39 7.27 81.97 24 5.48 No 44 1.78 Yes 0 0 No -23 0.74 Yes 47 68.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 35841537 + NM_001042590 TMEM8B 1 1.24 0.11 8 3.55 82.47 18 4.9 No 27 1.39 Yes 0 0 No -39 0.82 Yes 31 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35843361 + NM_001042590 TMEM8B 1 1.29 0.13 7 6.67 89.27 24 4.8 No 59 1.78 Yes 0 0 No -21 0.91 Yes 49 79.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35845804 + NM_001042590 TMEM8B 1 2.98 0.38 20 7.74 89.22 26 5.1 No 24 0.17 No 0 0 No -19 0.28 No 47 62.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 201105196 - NM_001288565 TMEM9 1 0.27 0.21 14 8.02 91.59 23 3.49 No 37 0.61 No 0 0 No -22 0.54 No 53 50.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73453374 + NM_014738 TMEM94 1 2.35 0.67 31 10.6 87.15 13 5.35 No 33 0.77 Yes 31 0.67 Yes -31 0.83 Yes 39 86.71 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73483121 + NM_014738 TMEM94 1 0.14 0.13 7 7.76 87.39 21 4.88 No 8 0.89 Yes 0 0 No -20 0.95 Yes 50 97.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73483726 + NM_014738 TMEM94 1 0.22 0.18 8 8.36 85.76 40 6.55 Yes 55 1.03 Yes 0 0 No -32 0.53 No 34 60.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73485881 + NM_014738 TMEM94 1 0.41 0.19 13 4.03 82.51 19 3.39 No 18 0.93 Yes 23 0.9 Yes -23 0.9 Yes 52 69.51 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 73486271 + NM_014738 TMEM94 1 1.41 0.68 34 12.36 87.92 31 5.66 Yes 59 0.71 No 25 0.71 Yes -25 0.53 No 45 72.17 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 73487110 + NM_014738 TMEM94 1 0.32 0.13 8 5.29 75.18 14 3.98 No 1 0.24 No 21 0.45 Yes -20 0.76 Yes 50 87.17 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 73488319 + NM_014738 TMEM94 1 0.57 0.19 13 7.53 75.42 39 7.23 Yes 26 1.25 Yes 38 0.2 Yes -38 0.93 Yes 32 94.28 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73489783 + NM_014738 TMEM94 1 0.24 0.14 9 -4.64 0 33 6.32 Yes 20 2.01 Yes 0 0 No -32 0.75 Yes 38 83.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73490710 + NM_014738 TMEM94 1 4.91 1.68 60 0.55 66.62 181 12.74 Yes 23 1.26 Yes 0 0 No -35 0.88 Yes 35 94.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73490790 + NM_014738 TMEM94 1 3.78 1.22 50 4.12 81.28 22 5.61 Yes 74 -4.04 No 21 0.87 Yes -21 0.95 Yes 49 95.49 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 73493761 + NM_014738 TMEM94 1 0.43 0.19 13 6.67 81.03 19 5.2 No 32 0.97 Yes 0 0 No -30 0.79 Yes 40 83.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73494536 + NM_014738 TMEM94 1 1.13 0.58 29 -3.66 0 11 4.58 No 22 1.15 Yes 22 0.93 Yes -34 0.79 Yes 48 37.42 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 73494942 + NM_014738 TMEM94 1 0.53 0.18 11 -6.74 0 23 5.79 Yes 30 0.85 Yes 0 0 No -22 0.46 No 48 45.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 26652533 + NM_014573 TMEM97 1 8.52 9.89 72 4.21 0 33 4.77 No 10 0.89 Yes 0 0 No -28 0.85 Yes 42 87.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 69072439 - NM_007114 TMF1 1 0.11 0.1 7 3.29 81.05 24 5.13 No 39 0.16 No 0 0 No -23 0.56 No 44 65.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 69072479 - NM_007114 TMF1 1 0.12 0.13 7 -8.47 0 27 5.9 Yes 9 -3.01 No 27 0.6 Yes -20 0.26 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 69073328 - NM_007114 TMF1 1 0.19 0.17 10 -1.82 0 52 5.41 No 3 1.46 Yes 0 0 No -35 0.68 Yes 35 61.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 69075223 - NM_007114 TMF1 1 0.59 0.76 37 6.13 85.61 16 4.58 No 60 0.63 No 0 0 No -25 0.63 No 45 47.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 69075240 - NM_007114 TMF1 1 0.45 0.57 28 -13.26 0 12 4.24 No 74 1.64 Yes 0 0 No -34 0.51 No 37 50.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 69079440 - NM_007114 TMF1 1 0.12 0.17 11 6.12 85.17 33 5.74 Yes 53 0.61 No 0 0 No -32 0.83 Yes 38 84.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 69082871 - NM_007114 TMF1 1 0.21 0.25 15 2.39 71.71 35 7.13 Yes 22 0.95 Yes 22 0.75 Yes -34 0.68 Yes 36 73.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 69087152 - NM_007114 TMF1 1 0.13 0.15 9 1.51 84.35 25 6.54 Yes 12 1.26 Yes 0 0 No -24 0.86 Yes 46 85.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 69087870 - NM_007114 TMF1 1 0.08 0.11 8 -6.63 76.11 67 7.4 Yes 0 0.9 Yes 0 0 No -26 0.39 No 44 35.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 69092080 - NM_007114 TMF1 1 0.08 0.13 9 5.05 77.19 27 5.57 Yes 14 0.2 No 20 0.94 Yes -26 0.57 No 50 55.35 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 154739759 - NM_018196 TMLHE 1 1.56 0.39 21 2.31 75.85 26 5.1 No 66 0.53 No 0 0 No -25 0.9 Yes 45 96.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 154766780 - NM_018196 TMLHE 1 1.45 0.51 29 7.5 73.85 36 6.47 Yes 75 1.23 Yes 0 0 No -35 0.48 No 40 58.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 154771916 - NM_018196 TMLHE 1 0.87 0.33 21 5.06 73.31 32 5.73 Yes 40 1.26 Yes 0 0 No -31 0.63 No 39 73.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 100309530 + NM_001166116 TMOD1 1 0.26 0.24 15 10.77 89.66 68 7.49 Yes 68 2.22 Yes 0 0 No -28 0.62 No 41 58.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 100328153 + NM_001166116 TMOD1 1 0.24 0.26 14 5.01 76.35 16 5.74 Yes 40 1.18 Yes 0 0 No -52 0.91 Yes 18 86.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100336292 + NM_001166116 TMOD1 1 0.21 0.18 10 7.71 91.37 30 4.25 No 50 -2.92 No 0 0 No -29 0.38 No 40 50.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 100351588 + NM_001166116 TMOD1 1 0.21 0.13 9 3.01 0 29 8.67 Yes 16 1.7 Yes 0 0 No -32 0.77 Yes 38 83.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 52098575 + NM_014548 TMOD2 1 1.15 0.18 9 -5.91 65.95 58 8.25 Yes 45 1.65 Yes 0 0 No -57 0.39 No 13 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 52127190 + NM_014547 TMOD3 1 0.67 1.03 35 10.1 88.46 23 5.1 No 23 1.58 Yes 30 0.64 Yes -22 0.44 No 40 58.41 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 52140241 + NM_014547 TMOD3 1 0.18 0.26 15 9.71 94.99 32 5.83 Yes 68 -3.39 No 0 0 No -27 0.62 No 43 59.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 52167301 + NM_014547 TMOD3 1 0.09 0.14 8 -3.17 0 14 4.08 No 67 -4.47 No 0 0 No -17 0.57 No 53 73.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 98917474 + NM_001032283 TMPO 1 0.01 0.1 7 11.54 92.14 29 6.36 Yes 50 1.49 Yes 0 0 No -28 0.7 Yes 42 59.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 98926600 + NM_001032283 TMPO 1 35.68 191.71 72 11.61 96.33 35 6.5 Yes 22 0.92 Yes 28 0.91 Yes -28 0.86 Yes 42 82.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 85133094 + NM_021103 TMSB10 1 0.01 0.71 27 2.01 77.47 24 5.06 No NA NA NA 23 0.85 Yes -20 0.45 No 56 37.14 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 85133138 + NM_021103 TMSB10 1 0.01 0.44 25 -1.13 0 18 4.58 No 23 -0.85 No 0 0 No -17 0.54 No 36 43.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 85133148 + NM_021103 TMSB10 1 0 0.18 12 -3.62 0 13 4.2 No 1 -2.43 No 0 0 No -27 0.4 No 43 29.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 85133394 + NM_021103 TMSB10 1 0.05 4.33 69 8.29 89.13 25 5.2 No 12 0.11 No 0 0 No -24 0.8 Yes 46 89.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 85133478 + NM_021103 TMSB10 1 0.01 1.15 47 1.14 65.83 36 4.01 No 55 1.07 Yes 25 0.84 Yes -26 0.32 No 41 30.44 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 85133489 + NM_021103 TMSB10 1 0.05 3.9 69 1.19 0 15 4.47 No 66 1.08 Yes 25 0.84 Yes -37 0.22 No 30 33.49 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 85133523 + NM_021103 TMSB10 1 0 0.26 16 -1.85 0 16 4.46 No NA NA NA 0 0 No -36 0.88 Yes 34 82.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 85133583 + NM_021103 TMSB10 1 0 0.11 7 2.78 74.96 19 5.92 Yes 25 0.2 No 0 0 No -28 0.49 No 42 70.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 103218800 + NM_194324 TMSB15B 1 2.15 0.35 21 0.23 72.59 50 6.44 Yes 4 0.41 No 28 0.05 Yes -50 0.87 Yes 20 78.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 12993725 + NM_021109 TMSB4X 1 0 1.43 51 5.82 81.14 13 6.86 Yes 0 0.84 Yes 0 0 No -40 0.48 No 55 52.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 12994309 + NM_021109 TMSB4X 1 0 0.19 14 -4.83 0 16 4.58 No 29 -1.92 No 0 0 No -7 0.2 No 56 22.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 12994315 + NM_021109 TMSB4X 1 0 0.22 11 -14.45 0 9 2.68 No 35 -1.93 No 0 0 No -13 0.5 No 15 29.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 12994833 + NM_021109 TMSB4X 1 0 0.14 9 -3.45 0 13 3.47 No 0 0 No 0 0 No -17 0.7 Yes 53 47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 12994889 + NM_021109 TMSB4X 1 0 0.33 19 2.01 0 39 6.67 Yes 35 1.93 Yes 44 0.69 Yes -38 0.43 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 12994906 + NM_021109 TMSB4X 1 0.01 2.26 66 -1.85 0 16 4.47 No 52 1.89 Yes 0 0 No -55 0.53 No 18 69.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 12994998 + NM_021109 TMSB4X 1 0 0.74 35 8.16 83.34 17 5.95 Yes 4 0.2 No 0 0 No -27 0.64 No 43 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 29766909 - NM_001193451 TMTC1 1 2.11 0.56 23 9.59 79.47 37 6.54 Yes 24 0.68 No 0 0 No -27 0.77 Yes 43 59.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 83084026 + NM_001320322 TMTC2 1 1.4 0.21 13 7.06 81.8 36 4.17 No 17 0.55 No 0 0 No -29 0.47 No 41 58.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 83150761 + NM_001320322 TMTC2 1 0.76 0.13 8 10.05 99.09 25 5.3 No 12 0.43 No 0 0 No -25 0.92 Yes 45 85.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 83208026 + NM_001320322 TMTC2 1 0.77 0.1 7 6.5 89.06 23 4.34 No 53 1.37 Yes 0 0 No -22 0.61 No 48 60.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 83295108 + NM_001320322 TMTC2 1 10.98 0.64 31 4.63 0 47 7.55 Yes 34 0.37 No 0 0 No -42 0.24 No 38 44.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 88542195 + NM_181783 TMTC3 1 0.97 0.15 7 5.34 75.64 13 6.63 Yes 43 0.51 No 0 0 No -40 0.5 No 33 61.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 88566428 + NM_181783 TMTC3 1 1.61 0.4 22 6.18 92.07 29 7.98 Yes 65 0.84 Yes 0 0 No -28 0.85 Yes 42 78.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 88566742 + NM_181783 TMTC3 1 1.5 0.25 17 7.63 86.96 43 8.17 Yes 75 0.71 No 42 0.78 Yes -42 0.8 Yes 28 75.3 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 101267222 - NM_032813 TMTC4 1 0.76 0.17 8 7.13 79.84 30 6.78 Yes 17 1.34 Yes 0 0 No -29 0.89 Yes 41 79.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 101281749 - NM_032813 TMTC4 1 0.86 0.18 11 5.27 76.39 15 5.57 Yes 74 1.24 Yes 0 0 No -28 0.87 Yes 42 90 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 101288034 - NM_032813 TMTC4 1 1.62 0.17 8 7.91 82.97 35 5.75 Yes 22 0.67 No 22 0.86 Yes -22 0.71 Yes 36 46.98 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr13 101291109 - NM_032813 TMTC4 1 3.41 0.33 18 3.05 68.76 41 6.4 Yes 28 1.24 Yes 0 0 No -40 0.88 Yes 30 94.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 150779004 - NM_001136044 TMUB1 1 0.15 0.26 14 7.6 88.12 21 5.2 No 8 0.86 Yes 22 0.98 Yes -20 0.79 Yes 50 67.57 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 150779351 - NM_001136044 TMUB1 1 0.91 0.57 29 7.11 81.59 20 5.1 No 53 -4.56 No 0 0 No -25 0.57 No 51 37.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 150779498 - NM_001136044 TMUB1 1 1.41 0.99 46 -0.62 69.36 13 4.67 No 38 0.45 No 0 0 No -22 0.57 No 48 49.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 150779518 - NM_001136044 TMUB1 1 0.6 0.43 23 -0.86 0 10 4 No 18 0.41 No 0 0 No -30 0.78 Yes 40 29.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 150779525 - NM_001136044 TMUB1 1 1.09 0.75 38 0.48 72.26 24 5.48 No 11 0.43 No 0 0 No -23 0.76 Yes 47 67.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 150779546 - NM_001136044 TMUB1 1 1.7 1.21 48 -11.73 63.2 73 8.13 Yes 60 1.64 Yes 0 0 No -16 0.37 No 54 33.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 150779944 - NM_001136044 TMUB1 1 0.21 0.15 10 2.79 72.95 21 5.19 No 0 0.3 No 0 0 No -20 0.82 Yes 50 89.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 51714658 + NM_030755 TMX1 1 0.05 0.19 11 10.22 81.36 18 6.2 Yes 5 0.88 Yes 0 0 No -30 0.92 Yes 40 91.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 51718554 + NM_030755 TMX1 1 0.03 0.11 8 6.05 81.79 28 5.75 Yes 61 1.48 Yes 0 0 No -27 0.31 No 52 49.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 57501939 + NM_001347895 TMX2 1 0.07 0.17 11 7.58 83.68 33 8.71 Yes 20 0.66 No 0 0 No -32 0.64 No 38 79.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 57506581 + NM_001347895 TMX2 1 1.1 3.08 65 -7.11 0 18 3.53 No 66 -6.18 No 23 0.84 Yes -16 0.77 Yes 54 57.75 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 57506661 + NM_001347895 TMX2 1 0.13 0.38 23 7.57 74.86 14 5.07 No 1 1.64 Yes 0 0 No -34 0.83 Yes 36 92.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 57577213 + NR_037646 TMX2-CTNND1 1 0.27 0.33 18 2.02 0 44 8.28 Yes 31 0.84 Yes 0 0 No -27 0.53 No 43 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 66348783 - NM_019022 TMX3 1 0.64 0.74 37 8.46 83.72 29 5.68 Yes 60 1.08 Yes 0 0 No -28 0.74 Yes 42 75.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 66354785 - NM_019022 TMX3 1 1.31 0.83 37 9.48 87.74 15 5.99 Yes 8 1.06 Yes 0 0 No -20 0.65 No 50 63.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 66355001 - NM_019022 TMX3 1 0.38 0.15 8 -7.58 71.2 30 8.1 Yes 43 0.58 No 0 0 No -37 0.57 No 33 77.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 66356292 - NM_019022 TMX3 1 2.59 1.08 49 6.32 75.94 17 6.32 Yes 62 0.27 No 28 0.47 Yes -28 0.78 Yes 42 75.34 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 66357219 - NM_019022 TMX3 1 3.2 1.36 46 8.48 85.76 21 5.63 Yes 41 1.19 Yes 27 0.83 Yes -25 0.5 No 45 45.25 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 66368902 - NM_019022 TMX3 1 0.17 0.24 12 2.09 78.22 28 5.87 Yes 24 0.91 Yes 0 0 No -27 0.95 Yes 43 95.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 66368905 - NM_019022 TMX3 1 0.76 0.99 44 4.44 71.05 25 5.68 Yes 21 0.91 Yes 24 0.93 Yes -24 0.93 Yes 46 95.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 66370181 - NM_019022 TMX3 1 0.33 0.35 19 7.59 77.28 34 6.71 Yes 21 0.69 No 0 0 No -34 0.65 No 36 75.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 66379733 - NM_019022 TMX3 1 1.73 1.17 49 7.61 87.89 32 6.23 Yes 6 0.17 No 0 0 No -31 0.79 Yes 39 78.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 7963264 - NM_021156 TMX4 1 0.59 0.71 36 -0.62 0 40 5.68 Yes 37 0.74 No 0 0 No -39 0.7 Yes 31 80.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 103599038 + NM_006291 TNFAIP2 1 0.11 0.17 10 4.5 75.11 61 7.87 Yes 66 0.62 No 26 0.06 Yes -51 0.44 No 45 65.84 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 103601560 + NM_006291 TNFAIP2 1 0.1 0.13 9 -0.97 0 27 5.57 Yes 14 1.38 Yes 0 0 No -26 0.88 Yes 44 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 138192878 + NM_001270508 TNFAIP3 1 0.1 0.56 24 8.2 83.26 30 4.85 No 30 0.5 No 0 0 No -29 0.68 Yes 41 74.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 138196870 + NM_001270508 TNFAIP3 1 0.4 2.18 60 5.91 76.45 37 6.65 Yes 50 1.01 Yes 0 0 No -19 0.78 Yes 51 58.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 138198284 + NM_001270508 TNFAIP3 1 0.14 0.88 36 5.24 87.07 20 4.02 No 0 0.55 No 0 0 No -20 0.91 Yes 50 88.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 138201225 + NM_001270508 TNFAIP3 1 0.25 1.01 42 3.57 84.75 25 5.2 No 28 1.36 Yes 0 0 No -24 0.9 Yes 46 93.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 138202173 + NM_001270508 TNFAIP3 1 0.13 0.75 36 -1.81 75.93 37 6.78 Yes 24 1.71 Yes 0 0 No -28 0.42 No 42 63.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 118671650 + NM_001286814 TNFAIP8 1 0.26 0.22 14 0.65 64.28 24 4.2 No 58 -4.61 No 0 0 No -23 0.89 Yes 47 94.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 118723433 + NM_001286814 TNFAIP8 1 0.47 0.35 20 7.84 88.38 21 5.97 Yes 60 1.09 Yes 0 0 No -20 0.62 No 50 57.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 151131118 + NM_024575 TNFAIP8L2 1 1.33 0.28 17 9.07 82.52 18 5.29 No 62 -2.8 No 0 0 No -24 0.42 No 46 46.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151131168 + NM_024575 TNFAIP8L2 1 10.62 2.44 66 5.78 85.09 22 5.69 Yes 9 1.72 Yes 0 0 No -21 0.82 Yes 49 83.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22880468 - NR_027140 TNFRSF10B 1 1.57 5.63 67 6.51 79.4 26 5.29 No 49 1.19 Yes 0 0 No -25 0.91 Yes 45 79.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22881447 - NR_027140 TNFRSF10B 1 0.09 0.31 19 10.51 90.78 41 8.33 Yes 31 1.98 Yes 0 0 No -23 0.83 Yes 47 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 22885943 - NR_027140 TNFRSF10B 1 0.21 0.15 9 0.85 0 15 4.58 No 43 1.91 Yes 0 0 No -36 0.46 No 21 37.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 22885985 - NR_027140 TNFRSF10B 1 0.21 0.28 17 -0.41 0 14 5.29 No 1 1.88 Yes 32 0.34 Yes -13 0.32 No 57 36.48 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 22887229 - NR_027140 TNFRSF10B 1 0.06 0.14 10 -3.23 0 9 3.87 No 9 0.33 No 0 0 No -29 0.36 No 41 39.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 22995513 - NM_003840 TNFRSF10D 1 0.49 0.21 10 1.74 0 25 6.02 Yes 12 1.55 Yes 0 0 No -24 0.65 No 46 62.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 60015935 + NM_001278268 TNFRSF11A 1 1.05 0.19 11 1.43 72.1 37 7.86 Yes 24 0.75 No 0 0 No -36 0.61 No 34 80.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 60015941 + NM_001278268 TNFRSF11A 1 9.95 1.15 43 -6.72 0 9 3.87 No 30 0.73 No 0 0 No -42 0.62 No 28 80.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 60035896 + NM_001278268 TNFRSF11A 1 1.31 0.25 15 7.88 74.16 22 5.74 Yes 36 0.42 No 31 0.78 Yes -26 0.77 Yes 44 70 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 16844792 - NM_012452 TNFRSF13B 1 0.35 1.32 47 9.33 85.25 19 7.02 Yes 6 1.14 Yes 29 0.71 Yes -29 0.73 Yes 41 78.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 16845428 - NM_012452 TNFRSF13B 1 1.86 6.72 71 8.65 85.52 22 4.9 No 9 1.21 Yes 0 0 No -21 0.91 Yes 49 93.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16850453 - NM_012452 TNFRSF13B 1 0.26 0.97 40 10.01 89.75 51 7.55 Yes 62 1.27 Yes 0 0 No -44 0.31 No 20 55.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 16852288 - NM_012452 TNFRSF13B 1 0.03 0.11 7 -1.41 0 13 4.36 No 73 0.91 Yes 0 0 No -32 0.64 No 38 71.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 16859434 - NM_012452 TNFRSF13B 1 0.8 2.18 54 10.31 91.26 27 5.08 No 14 1.26 Yes 0 0 No -26 0.6 No 40 74.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 42321553 - NM_052945 TNFRSF13C 1 0.13 0.17 11 1.26 0 14 3.87 No 29 0.8 Yes 0 0 No -30 0.56 No 40 66.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 2489760 + NM_001297605 TNFRSF14 1 0.08 0.11 8 -4.42 0 17 4.36 No 71 0.2 No 24 0.62 Yes -41 0.54 No 50 30.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 2489844 + NM_001297605 TNFRSF14 1 0.14 0.24 11 5.95 86.79 16 5.48 No 19 0.71 No 0 0 No -31 0.43 No 39 70.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 2490058 + NM_001297605 TNFRSF14 1 0.09 0.17 8 3.68 81.75 29 6.55 Yes NA NA NA 0 0 No -28 0.48 No 42 65.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 2490126 + NM_001297605 TNFRSF14 1 0.25 0.49 26 9.86 88.36 24 7.5 Yes 11 1.79 Yes 0 0 No -23 0.96 Yes 47 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 2490319 + NM_001297605 TNFRSF14 1 3.23 5.83 68 12.94 90.47 30 5.83 Yes NA NA NA 29 0.63 Yes -33 0.66 Yes 41 72.52 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 2491098 + NM_001297605 TNFRSF14 1 0.06 0.11 8 8.5 83.25 43 6.56 Yes 70 -0.88 No 0 0 No -36 0.53 No 34 57.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 2491241 + NM_001297605 TNFRSF14 1 0.06 0.13 8 6.07 80.35 16 8.6 Yes NA NA NA 22 0.93 Yes -32 0.46 No 38 54.59 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 2491347 + NM_001297605 TNFRSF14 1 0.33 0.67 31 5.99 86.76 18 4.59 No NA NA NA 0 0 No -27 0.89 Yes 43 74.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 2496491 + NM_001297605 TNFRSF14 1 0.06 0.15 9 -0.21 0 37 7.84 Yes 24 2.16 Yes 36 0.76 Yes -36 0.93 Yes 34 96.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 12060876 + NM_001192 TNFRSF17 1 0.64 4.79 68 6.88 81.27 39 4.32 No 75 -0.86 No 26 0.77 Yes -34 0.57 No 36 64.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 12061420 + NM_001192 TNFRSF17 1 0.06 0.43 26 -0.53 0 19 5.75 Yes 75 1.13 Yes 24 0.9 Yes -18 0.81 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 12061432 + NM_001192 TNFRSF17 1 0.02 0.19 12 -2.89 0 12 3.87 No 18 1.08 Yes 0 0 No -30 0.81 Yes 40 81.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1139549 - NM_004195 TNFRSF18 1 0.65 0.17 9 6.5 83.96 22 5.21 No 34 1.46 Yes 0 0 No -19 0.52 No 51 47.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1139549 - NM_004195 TNFRSF18 1 1.01 0.14 8 6.5 83.96 22 5.21 No 34 1.46 Yes 0 0 No -19 0.52 No 51 47.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 1139697 - NM_004195 TNFRSF18 1 0.43 0.11 8 9.81 82.18 32 5.83 Yes 19 0.35 No 0 0 No -31 0.92 Yes 39 90.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6443057 - NM_001346092 TNFRSF1A 1 0.78 0.57 29 11.43 83.08 36 6.48 Yes -4 1.01 Yes 32 0.37 Yes -35 0.37 No 38 80.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 12240009 + NM_001066 TNFRSF1B 1 0.17 0.11 7 7.7 88.74 21 4.9 No 8 0.87 Yes 0 0 No -20 0.88 Yes 50 78.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12262563 + NM_001066 TNFRSF1B 1 0.53 0.5 25 11.25 88.38 27 7.75 Yes 14 1.44 Yes 0 0 No -26 0.97 Yes 44 96.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12262825 + NM_001066 TNFRSF1B 1 0.14 0.13 7 8.17 85.45 34 5.83 Yes 21 0.66 No 0 0 No -33 0.79 Yes 37 92.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12266793 + NM_001066 TNFRSF1B 1 4.75 4.31 71 4.02 71.97 25 8.25 Yes 12 2.33 Yes 27 0.94 Yes -24 0.91 Yes 46 91.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 47252129 - NM_014452 TNFRSF21 1 0.76 0.35 17 5.6 77.65 31 5.75 Yes 42 1.08 Yes 0 0 No -30 0.9 Yes 40 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12132216 + NM_001243 TNFRSF8 1 1.4 1.64 53 5.25 81.13 24 5 No 11 0.67 No 0 0 No -23 0.3 No 44 54.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 12149426 + NM_001243 TNFRSF8 1 0.8 1.32 49 5.76 85.08 29 7.62 Yes 16 1.66 Yes 0 0 No -28 0.88 Yes 42 94.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12149444 + NM_001243 TNFRSF8 1 0.42 0.58 30 3.72 88.96 23 4.8 No 34 1.65 Yes 0 0 No -22 0.8 Yes 48 72.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12172222 + NM_001243 TNFRSF8 1 0.21 0.43 19 8.66 98.1 13 5.18 No 71 1.42 Yes 0 0 No -23 0.6 No 47 87.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 12177158 + NM_001243 TNFRSF8 1 0.53 0.9 39 11.05 83.95 38 6.16 Yes 33 0.92 Yes 0 0 No -37 0.57 No 33 72.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 12181787 + NM_001243 TNFRSF8 1 0.36 0.64 31 3.71 76.84 20 4.68 No 68 -2.41 No 0 0 No -20 0.62 No 50 49.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 12183342 + NM_001243 TNFRSF8 1 0.11 0.14 10 -11.17 0 18 4.97 No 53 1.37 Yes 0 0 No -24 0.93 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 12188442 + NM_001243 TNFRSF8 1 0.41 0.51 25 6.62 85.02 22 5.29 No 9 -2.47 No 0 0 No -24 0.62 No 46 69.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 12198288 + NM_001243 TNFRSF8 1 10.5 10.83 72 4.05 74.77 19 5.66 Yes 48 -2.38 No 25 0.81 Yes -25 0.89 Yes 45 66.24 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 8000089 - NM_001561 TNFRSF9 1 0.49 0.15 9 3.14 75.88 28 6.09 Yes 6 0.26 No 0 0 No -27 0.76 Yes 43 81.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 172233196 - NM_003810 TNFSF10 1 0.22 0.1 7 7.57 74.9 26 7.27 Yes 13 1.76 Yes 0 0 No -25 0.69 Yes 45 66.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 172236256 - NM_003810 TNFSF10 1 0.6 0.4 19 6.19 83.76 21 6.72 Yes 8 0.69 No 27 0.48 Yes -27 0.67 Yes 43 80.14 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 43162516 + NM_033012 TNFSF11 1 0.68 0.33 15 3.37 73.44 34 5.69 Yes 32 0.06 No 0 0 No -33 0.69 Yes 42 67.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 43168066 + NM_033012 TNFSF11 1 1.92 0.85 35 9.1 82.05 47 6.13 Yes -4 0.56 No 0 0 No -32 0.83 Yes 38 93.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 43170488 + NM_033012 TNFSF11 1 0.59 0.29 14 8.13 87.6 24 6.65 Yes 11 1.79 Yes 0 0 No -23 0.79 Yes 47 89.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7456903 + NM_003809 TNFSF12 1 22.43 2.5 62 8.26 86.36 19 5.64 Yes 6 1.14 Yes 0 0 No -18 0.45 No 52 65.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 108922672 + NM_006573 TNFSF13B 1 1.75 0.53 24 4.35 66.02 25 5.57 Yes 12 0.99 Yes 23 0.76 Yes -24 0.87 Yes 46 87.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 108955123 + NM_006573 TNFSF13B 1 6.24 2.01 53 13.21 87.55 22 5.64 Yes 9 0.75 No 25 0.8 Yes -25 0.94 Yes 45 93.26 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 173155889 - NM_001297562 TNFSF4 1 2.23 2.19 50 8.3 82.09 27 6.49 Yes 14 0.96 Yes 0 0 No -26 0.47 No 44 55.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 170784096 - NM_015028 TNIK 1 0.06 0.11 7 7.17 82.09 25 5.38 No 45 1.44 Yes 0 0 No -24 0.89 Yes 46 83.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 170784138 - NM_015028 TNIK 1 0.15 0.31 17 5.12 87.27 16 5.96 Yes 3 1.46 Yes 28 0.84 Yes -27 0.55 No 43 61.72 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 170786777 - NM_015028 TNIK 1 0.08 0.14 9 5.32 0 14 4.33 No 16 1.05 Yes 18 0.8 Yes -28 0.7 Yes 42 94.19 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 170792291 - NM_015028 TNIK 1 0.16 0.26 16 9.21 69.07 41 6.78 Yes 28 0.82 Yes 0 0 No -40 0.89 Yes 30 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 170843722 - NM_015028 TNIK 1 0.11 0.19 12 1.91 83.12 24 5 No 61 0.25 No 0 0 No -23 0.92 Yes 47 84.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 170865677 - NM_015028 TNIK 1 0.16 0.13 9 7.64 83.68 30 5.65 Yes 74 -4.75 No 0 0 No -22 0.46 No 48 63.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 170947783 - NM_015028 TNIK 1 0.08 0.14 9 6.11 75.96 26 5.2 No 46 1.77 Yes 0 0 No -25 0.77 Yes 45 79.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 170957473 - NM_015028 TNIK 1 0.08 0.1 7 8.62 87.47 23 6.16 Yes 10 1.71 Yes 0 0 No -22 0.73 Yes 48 68.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 170990139 - NM_015028 TNIK 1 0.08 0.11 8 8.11 94.07 31 4.57 No 4 0.43 No 0 0 No -30 0.78 Yes 40 83.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 171002396 - NM_015028 TNIK 1 1.81 2.53 62 8.98 85.81 31 6.99 Yes 18 0.96 Yes 0 0 No -30 0.89 Yes 40 96.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 171003380 - NM_015028 TNIK 1 0.37 0.54 29 8.79 94.98 24 7.63 Yes 11 0.81 Yes 0 0 No -23 0.48 No 47 78.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 171058567 - NM_015028 TNIK 1 0.32 0.49 24 11.81 97.96 39 7.19 Yes 62 -0.67 No 0 0 No -28 0.55 No 32 61.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 171065008 - NM_015028 TNIK 1 24.26 34.06 72 10.74 93.82 31 6.47 Yes 33 1.49 Yes 30 0.72 Yes -30 0.88 Yes 40 91.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 171124100 - NM_015028 TNIK 1 0.07 0.14 10 -2.36 0 32 5.03 No 27 -2.09 No 0 0 No -24 0.58 No 39 53.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 171124104 - NM_015028 TNIK 1 0.26 0.51 26 4.44 67.94 28 4.76 No 7 0.09 No 0 0 No -27 0.67 Yes 43 63.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 171163201 - NM_015028 TNIK 1 0.33 0.56 33 2.52 0 29 7.01 Yes 16 1.32 Yes 0 0 No -28 0.91 Yes 42 95.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 171168330 - NM_015028 TNIK 1 0.71 1.25 48 8.49 85.39 30 4.74 No 10 0.87 Yes 0 0 No -22 0.57 No 48 70.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 150409851 - NM_001252390 TNIP1 1 0.05 0.25 13 6.42 81.98 36 6.5 Yes 23 1.3 Yes 0 0 No -31 0.59 No 39 71.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 150410107 - NM_001252390 TNIP1 1 0.06 0.36 17 2.07 0 18 3.32 No 5 0.12 No 0 0 No -17 0.71 Yes 53 78.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 150410235 - NM_001252390 TNIP1 1 13.9 75.53 72 9.83 88.86 41 5.27 No 32 0.21 No 25 0.9 Yes -25 0.91 Yes 45 94.42 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 150410307 - NM_001252390 TNIP1 1 0.04 0.22 13 -5.2 80.87 36 4.96 No 76 0.72 No 0 0 No -32 0.66 No 38 79.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 150410333 - NM_001252390 TNIP1 1 0.04 0.18 12 -1.13 59.93 29 4.64 No 68 1.63 Yes 19 0.57 Yes -28 0.31 No 42 32.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 150410867 - NM_001252390 TNIP1 1 0.04 0.19 13 -4.1 0 11 4.12 No 65 -3.83 No 0 0 No -32 0.6 No 38 72.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 150410875 - NM_001252390 TNIP1 1 0.68 3.57 51 3.51 83.47 22 5 No 57 -3.83 No 0 0 No -24 0.77 Yes 46 83.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 150411956 - NM_001252390 TNIP1 1 0.97 3.03 63 -5.1 0 16 3.86 No 23 0.6 No 19 0.79 Yes -41 0.56 No 29 65.7 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 150411962 - NM_001252390 TNIP1 1 6.74 19.68 72 2.09 70.51 30 6.58 Yes 17 0.59 No 19 0.79 Yes -35 0.63 No 35 72.32 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 150411962 - NM_001252390 TNIP1 1 0.09 0.22 15 2.09 70.51 30 6.58 Yes 17 0.59 No 19 0.79 Yes -35 0.63 No 35 72.32 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 150412648 - NM_001252390 TNIP1 1 0.13 0.44 23 -2.72 0 29 6.32 Yes 16 0.69 No 0 0 No -28 0.86 Yes 42 45.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 150412686 - NM_001252390 TNIP1 1 0.06 0.17 11 4.74 84.41 129 10.09 Yes 21 -0.3 No 0 0 No -33 0.85 Yes 37 76.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 150413354 - NM_001252390 TNIP1 1 0.06 0.39 19 -0.34 0 15 3.79 No 76 1.46 Yes 0 0 No -26 0.55 No 44 70.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 150413373 - NM_001252390 TNIP1 1 0.32 2.21 60 -17.82 0 15 3.99 No 57 1.45 Yes 19 0.5 Yes -50 0.45 No 20 39.61 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 150415263 - NM_001252390 TNIP1 1 0.06 0.42 24 -5.58 0 14 3.87 No 12 1.04 Yes 0 0 No -48 0.86 Yes 22 92.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 2744280 - NM_001292016 TNIP2 1 0.1 0.14 7 -0.76 0 29 5.92 Yes 1 0.61 No 29 0.49 Yes -28 0.83 Yes 42 43.91 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr4 2746673 - NM_001292016 TNIP2 1 2026.03 174.38 72 8.95 88.1 31 5.35 No 18 1.05 Yes 24 0.8 Yes -30 0.92 Yes 40 90.17 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 122057841 - NM_024873 TNIP3 1 3 0.6 27 7.8 94.45 26 6.08 Yes 13 1.27 Yes 25 0.92 Yes -25 0.89 Yes 45 93.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 122059171 - NM_024873 TNIP3 1 2.8 0.24 15 11.6 87.64 23 5.59 Yes 10 0.97 Yes 23 0.86 Yes -27 0.58 No 43 57.46 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 122069797 - NM_024873 TNIP3 1 0.41 0.15 10 7.28 89.15 64 6.8 Yes 8 0.88 Yes 0 0 No -24 0.45 No 50 32.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 195596413 - NM_001308046 TNK2 1 6.8 1.6 49 7.65 91.42 126 10.92 Yes NA NA NA 27 0.37 Yes -28 0.32 No 54 54.84 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 195597092 - NM_001308046 TNK2 1 0.36 0.1 7 7.23 82.8 50 7.24 Yes 37 1.25 Yes 21 0.95 Yes -26 0.59 No 44 77.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 195597250 - NM_001308046 TNK2 1 2.24 0.56 28 12.03 92.65 29 5.92 Yes 43 0.43 No 28 0.78 Yes -28 0.8 Yes 42 73.86 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 195611854 - NM_001308046 TNK2 1 0.31 0.17 9 7.1 83.41 24 5.47 No 11 0.95 Yes 0 0 No -23 0.84 Yes 47 87.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 195612415 - NM_001308046 TNK2 1 8.16 4.35 70 9.69 86.42 24 5.96 Yes 11 0.91 Yes 23 0.82 Yes -23 0.63 No 47 77.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 9492055 + NM_003747 TNKS 1 0.13 0.11 7 9.4 79.82 30 6.32 Yes 68 1.04 Yes 0 0 No -22 0.58 No 41 75.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 9506828 + NM_003747 TNKS 1 0.13 0.11 8 9.86 92.96 23 5.92 Yes 10 1.21 Yes 0 0 No -30 0.43 No 40 56.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 9543890 + NM_003747 TNKS 1 0.68 0.4 18 8.26 78.13 21 5.18 No 8 0.75 No 0 0 No -20 0.74 Yes 50 51.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 9588410 + NM_003747 TNKS 1 0.41 0.25 13 -2.18 0 19 3.66 No 40 1.4 Yes 0 0 No -52 0.7 Yes 18 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 9592889 + NM_003747 TNKS 1 0.72 0.53 31 3.51 76.15 37 6.93 Yes 24 1.87 Yes 0 0 No -36 0.84 Yes 34 91.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 9605770 + NM_003747 TNKS 1 0.39 0.26 14 10.85 88.85 26 6.27 Yes 13 1.21 Yes 0 0 No -25 0.88 Yes 45 93.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 9608109 + NM_003747 TNKS 1 0.21 0.13 9 8.74 85.94 34 6 Yes 21 0.06 No 0 0 No -30 0.54 No 40 66.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 9609190 + NM_003747 TNKS 1 1.21 0.83 36 7.37 85.33 23 6 Yes 10 1.21 Yes 0 0 No -22 0.84 Yes 48 87.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 9620694 + NM_003747 TNKS 1 0.44 0.33 17 7.05 78.28 22 5.69 Yes 9 0.81 Yes 0 0 No -26 0.64 No 44 90.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 9629878 + NM_003747 TNKS 1 9.34 6.15 71 9.73 88.87 16 5.29 No 3 0.03 No 25 0.47 Yes -15 0.43 No 55 69.98 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 9630038 + NM_003747 TNKS 1 1.29 0.85 40 6.22 84.69 27 5.19 No -3 1.11 Yes 0 0 No -27 0.69 Yes 43 69.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 57069702 - NM_033396 TNKS1BP1 1 0.8 0.11 7 -0.68 66.39 15 5.33 No 2 0.65 No 26 0.63 Yes -23 0.86 Yes 47 81.92 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 93576874 + NM_025235 TNKS2 1 0.94 0.43 22 3.67 56.69 26 4.79 No 68 -5.07 No 23 0.76 Yes -25 0.71 Yes 45 57.94 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 93577640 + NM_025235 TNKS2 1 0.28 0.19 10 7.1 80.09 18 7.57 Yes 5 1.18 Yes 0 0 No -37 0.79 Yes 33 81.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 93579720 + NM_025235 TNKS2 1 0.2 0.14 9 2.61 78.27 35 5.81 Yes 70 1.37 Yes 0 0 No -27 0.63 No 43 56.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93589790 + NM_025235 TNKS2 1 0.14 0.14 10 3.61 65.78 50 7.97 Yes 37 0.97 Yes 0 0 No -35 0.44 No 27 53.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93594386 + NM_025235 TNKS2 1 0.87 0.88 43 8.6 85.88 21 5.12 No 8 0.71 No 0 0 No -24 0.39 No 42 63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 93596552 + NM_025235 TNKS2 1 1.6 1.46 54 -9.54 71.38 53 7.04 Yes 9 1.96 Yes 0 0 No -21 0.27 No 28 48.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93598135 + NM_025235 TNKS2 1 0.1 0.1 7 9.42 90.11 26 5.6 Yes 32 0.37 No 0 0 No -28 0.73 Yes 42 88.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 93601938 + NM_025235 TNKS2 1 0.14 0.11 7 -0.87 0 13 4.36 No 68 1.85 Yes 0 0 No -49 0.5 No 21 68.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 93604693 + NM_025235 TNKS2 1 1.76 1.17 51 1.12 69.29 25 5.15 No 29 0.64 No 0 0 No -24 0.46 No 46 48.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 72147064 + NM_153188 TNPO1 1 3.39 7.92 72 -5.25 0 12 5.28 No -1 1.12 Yes 30 0.43 Yes -12 0.7 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 72157618 + NM_153188 TNPO1 1 0.06 0.22 13 -1.99 65.44 30 7.54 Yes 32 -1.69 No 22 0.82 Yes -29 0.75 Yes 41 87.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 72157655 + NM_153188 TNPO1 1 0.03 0.13 7 2.66 62.67 25 5.47 No 31 0.39 No 0 0 No -24 0.63 No 46 73.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 72158180 + NM_153188 TNPO1 1 0.04 0.11 7 3.26 0 41 7.46 Yes 28 1.84 Yes 40 0.73 Yes -40 0.64 No 30 84.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 72173038 + NM_153188 TNPO1 1 0.04 0.11 7 2.28 67.75 33 6.96 Yes 20 1.03 Yes 24 0.9 Yes -32 0.79 Yes 38 85.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 72181693 + NM_153188 TNPO1 1 0.05 0.18 10 5.26 81.7 26 5.66 Yes 23 1.39 Yes 0 0 No -25 0.83 Yes 45 77.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 72192888 + NM_153188 TNPO1 1 0.12 0.4 20 -4.99 0 15 3.87 No 43 1.8 Yes 0 0 No -55 0.68 Yes 15 88.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 72195871 + NM_153188 TNPO1 1 0.05 0.17 9 2.69 79.6 35 6.75 Yes 3 0.59 No 0 0 No -34 0.69 Yes 36 75.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 12812459 - NM_001136195 TNPO2 1 2.07 1.5 54 5.68 66.89 38 6.06 Yes 39 0.5 No 30 0.73 Yes -30 0.75 Yes 40 78.04 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 12812766 - NM_001136195 TNPO2 1 0.29 0.38 21 10.53 77.79 28 7.21 Yes 15 2.15 Yes 0 0 No -27 0.87 Yes 43 89.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12812992 - NM_001136195 TNPO2 1 15.07 20.85 72 3.93 77.66 33 6.94 Yes 59 -3.59 No 28 0.62 Yes -28 0.56 No 42 66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 12813034 - NM_001136195 TNPO2 1 0.11 0.17 8 3.45 76.9 30 7.42 Yes 17 -0.96 No 28 0.62 Yes -29 0.95 Yes 41 93.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 12813727 - NM_001136195 TNPO2 1 0.37 0.51 28 -3.64 0 9 3.87 No 11 1.61 Yes 0 0 No -23 0.93 Yes 47 88.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12816612 - NM_001136195 TNPO2 1 0.09 0.11 7 3.23 76.4 23 4.68 No 44 0.89 Yes 27 0.66 Yes -22 0.7 Yes 48 75.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12816645 - NM_001136195 TNPO2 1 0.73 1.13 37 3.92 73.74 24 4.87 No 11 0.88 Yes 23 0.89 Yes -23 0.72 Yes 47 59.37 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 12816901 - NM_001136195 TNPO2 1 0.07 0.1 7 6.86 79.51 11 5.66 Yes -2 0.82 Yes 0 0 No -21 0.33 No 17 47.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 12816924 - NM_001136195 TNPO2 1 2.77 3.85 66 5.16 79.71 31 6.4 Yes 71 0.15 No 30 0.8 Yes -30 0.81 Yes 40 86.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 12822443 - NM_001136195 TNPO2 1 0.2 0.22 12 5.21 69.53 35 6.26 Yes 70 0.48 No 23 0.48 Yes -25 0.37 No 36 46.65 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 12826525 - NM_001136195 TNPO2 1 1.74 2.78 60 5.4 76.66 22 5.48 No 9 0.94 Yes 21 0.85 Yes -21 0.93 Yes 49 71.57 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12829909 - NM_001136195 TNPO2 1 0.11 0.19 10 5.83 74.98 25 5.37 No 52 0.73 No 0 0 No -24 0.63 No 46 57.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 12834149 - NM_001136195 TNPO2 1 0.15 0.11 7 6.52 85.85 35 5.29 No 40 0.12 No 0 0 No -21 0.42 No 18 24.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 12834175 - NM_001136195 TNPO2 1 2.8 1.56 56 -1.92 0 27 6.4 Yes 14 0.12 No 29 0.81 Yes -34 0.77 Yes 36 79.57 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 12834178 - NM_001136195 TNPO2 1 6.7 4.36 69 -3.72 74.73 24 6.16 Yes 11 0.14 No 29 0.81 Yes -31 0.77 Yes 39 76.18 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 12834245 - NM_001136195 TNPO2 1 1.03 0.63 31 7.82 91.23 17 5.66 Yes 75 1.12 Yes 0 0 No -28 0.64 No 45 61.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 128595674 - NR_034053 TNPO3 1 0.09 0.18 12 10.04 86.2 25 7.93 Yes 12 1.74 Yes 0 0 No -24 0.87 Yes 46 92.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128619184 - NR_034053 TNPO3 1 0.42 1.31 47 0.79 0 33 6.84 Yes 20 1.06 Yes 38 0.7 Yes -32 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 128621586 - NR_034053 TNPO3 1 0.32 0.89 40 6.69 81.82 28 6.48 Yes 15 0.27 No 0 0 No -27 0.77 Yes 43 70.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 128630257 - NR_034053 TNPO3 1 0.3 0.61 27 4.11 69.57 28 3.68 No 0 0.53 No 28 0.39 Yes -28 0.47 No 43 61.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 128634026 - NR_034053 TNPO3 1 0.06 0.11 8 8.33 84.3 39 6.84 Yes 18 1.02 Yes 0 0 No -31 0.76 Yes 39 78.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128641172 - NR_034053 TNPO3 1 0.03 0.1 7 5.9 87.17 20 4.57 No 17 1.68 Yes 0 0 No -19 0.29 No 41 56.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 128641283 - NR_034053 TNPO3 1 0.05 0.15 8 -0.5 0 9 3.87 No 33 0.91 Yes 0 0 No -45 0.67 Yes 25 85.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128643738 - NR_034053 TNPO3 1 0.09 0.24 16 9.85 92.63 23 5.24 No 10 0.47 No 0 0 No -22 0.39 No 43 32.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 128644355 - NR_034053 TNPO3 1 0.06 0.18 12 -3.06 84.82 27 6.32 Yes 76 -5.58 No 0 0 No -29 0.48 No 41 84.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 128645231 - NR_034053 TNPO3 1 0.13 0.21 12 7.06 79.42 18 5.46 No 5 1.07 Yes 25 0.77 Yes -25 0.52 No 53 60.34 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 128656446 - NR_034053 TNPO3 1 0.34 0.61 31 2.04 83.78 30 6.87 Yes 17 1.11 Yes 0 0 No -25 0.91 Yes 45 92.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128660050 - NR_034053 TNPO3 1 8.71 1.11 40 7.83 81.8 25 6 Yes 12 1.29 Yes 0 0 No -24 0.89 Yes 46 93.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128660050 - NR_034053 TNPO3 1 64.42 7.88 72 7.83 81.8 25 6 Yes 12 1.29 Yes 0 0 No -24 0.89 Yes 46 93.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128669018 - NR_034053 TNPO3 1 1.02 0.13 7 6.81 89.48 19 4.21 No 2 0.75 No 0 0 No -18 0.57 No 52 81.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 128671347 - NR_034053 TNPO3 1 1.27 0.17 12 7.89 82.78 35 5.95 Yes 56 1.82 Yes 0 0 No -34 0.76 Yes 36 70.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128671347 - NR_034053 TNPO3 1 0.83 0.1 7 7.89 82.78 35 5.95 Yes 56 1.82 Yes 0 0 No -34 0.76 Yes 36 70.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128679611 - NR_034053 TNPO3 1 7.92 1.06 45 8.03 87.15 27 7.68 Yes 14 1.58 Yes 0 0 No -26 0.71 Yes 44 68.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 128679611 - NR_034053 TNPO3 1 1.01 0.1 7 8.03 87.15 27 7.68 Yes 14 1.58 Yes 0 0 No -26 0.71 Yes 44 68.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 5360995 - NM_001080495 TNRC18 1 0.36 0.18 11 3.84 75.83 15 5.53 No 2 0.48 No 0 0 No -20 0.58 No 50 62.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 5364877 - NM_001080495 TNRC18 1 0.43 0.13 7 -0.65 73.56 34 8.49 Yes 21 0.9 Yes 0 0 No -33 0.9 Yes 37 89.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5369601 - NM_001080495 TNRC18 1 35.13 9.6 72 10.48 94.45 18 6.56 Yes 26 1.19 Yes 24 0.73 Yes -24 0.77 Yes 46 87.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 5401348 - NM_001080495 TNRC18 1 0.77 0.76 43 -1.43 0 9 2.66 No 6 0.73 No 0 0 No -33 0.58 No 44 60.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 5414113 - NM_001080495 TNRC18 1 5.89 3.1 64 7.82 86.46 29 7.62 Yes 16 2.46 Yes 0 0 No -28 0.8 Yes 42 85.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 5433864 - NM_001080495 TNRC18 1 2.63 2.19 55 9.84 87.65 22 5.29 No 47 0.86 Yes 0 0 No -21 0.71 Yes 49 86.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 24741575 + NM_001330520 TNRC6A 1 0.33 0.17 9 1.18 82.5 66 9.17 Yes 53 1.54 Yes 0 0 No -59 0.29 No 11 51.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 24762054 + NM_001330520 TNRC6A 1 0.24 0.18 11 -2.84 0 11 4.12 No 36 -3.44 No 0 0 No -29 0.61 No 41 55.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 24769759 + NM_001330520 TNRC6A 1 0.26 0.22 13 6.91 84.26 39 6.11 Yes -4 0.52 No 0 0 No -24 0.89 Yes 46 90.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 24774145 + NM_001330520 TNRC6A 1 3.24 2.53 63 5.98 78.71 36 7.87 Yes 23 0.84 Yes 0 0 No -25 0.48 No 35 73.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 24775972 + NM_001330520 TNRC6A 1 0.96 0.75 38 10.51 87.69 19 4.63 No 6 0.68 No 0 0 No -22 0.51 No 48 47.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 24786924 + NM_001330520 TNRC6A 1 0.57 0.46 23 7.43 77.34 22 5.11 No 67 -4.69 No 0 0 No -25 0.41 No 45 66.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 24788322 + NM_001330520 TNRC6A 1 0.34 0.28 15 1.97 74.62 16 5.04 No 3 1.11 Yes 0 0 No -18 0.57 No 52 50.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 24789664 + NM_001330520 TNRC6A 1 2.32 1.71 58 5.97 76.97 22 6.99 Yes 63 1.53 Yes 27 0.64 Yes -27 0.65 No 43 70.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 24805845 + NM_001330520 TNRC6A 1 0.62 0.17 10 -1.21 0 19 4.85 No 6 0.26 No 37 0.39 Yes -18 0.51 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 24811918 + NM_001330520 TNRC6A 1 0.31 0.29 14 7.27 86.54 17 5.57 Yes 4 0.59 No 0 0 No -22 0.5 No 48 43.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 24815480 + NM_001330520 TNRC6A 1 0.4 0.38 20 5.69 78.72 35 6.25 Yes 52 0.4 No 24 0.84 Yes -28 0.4 No 42 55.76 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 24816025 + NM_001330520 TNRC6A 1 1.04 0.67 31 11.31 82.36 139 10.28 Yes 72 1.16 Yes 19 0.7 Yes -24 0.83 Yes 46 94.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 24816994 + NM_001330520 TNRC6A 1 7.25 5.64 72 8.93 84.39 25 7.51 Yes 12 1.19 Yes 24 0.84 Yes -24 0.66 No 46 64.24 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 24826675 + NM_001330520 TNRC6A 1 0.36 0.35 20 6.44 80.71 23 4.34 No 22 1.97 Yes 22 0.91 Yes -22 0.75 Yes 48 67.04 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 24826708 + NM_001330520 TNRC6A 1 0.37 0.4 23 3.06 68.86 36 6.44 Yes 55 1.96 Yes 0 0 No -23 0.58 No 31 64.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 24834175 + NM_001330520 TNRC6A 1 0.17 0.17 11 6.85 80.73 18 6.08 Yes 5 1.99 Yes 27 0.94 Yes -17 0.78 Yes 53 86.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 24836814 + NM_001330520 TNRC6A 1 0.25 0.25 16 7.47 80.57 31 8.61 Yes 40 1.14 Yes 0 0 No -30 0.79 Yes 40 90.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 40624711 + NM_001162501 TNRC6B 1 1.32 0.75 33 7.09 85.23 23 7.14 Yes 10 1.39 Yes 0 0 No -22 0.94 Yes 48 94.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76001432 + NM_001142640 TNRC6C 1 12.17 0.88 37 7.37 84.34 28 7.33 Yes 15 0.23 No 0 0 No -27 0.43 No 33 31.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 76005655 + NM_001142640 TNRC6C 1 1.77 0.33 19 4.06 83 27 8.59 Yes 14 0.73 No 0 0 No -26 0.88 Yes 44 88.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 47512920 - NM_022748 TNS3 1 4.37 0.63 35 9.49 92.2 19 6.23 Yes 5 0.96 Yes 0 0 No -39 0.5 No 45 50.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45807186 + NM_025077 TOE1 1 0.14 0.11 8 6.86 83.28 26 5.38 No 67 0.84 Yes 0 0 No -23 0.78 Yes 47 69.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45808406 + NM_025077 TOE1 1 15.41 7.44 72 4.3 78.73 21 3.83 No 44 1.17 Yes 24 0.91 Yes -24 0.88 Yes 46 94.28 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 45808410 + NM_025077 TOE1 1 0.88 0.42 26 0.28 0 25 4.11 No 48 1.17 Yes 24 0.91 Yes -28 0.84 Yes 42 92.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 45808589 + NM_025077 TOE1 1 2.8 1.54 50 6.25 81.79 30 5.38 No 61 -1.13 No 0 0 No -29 0.88 Yes 41 91.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 1310258 - NM_001318514 TOLLIP 1 0.12 0.11 7 6.46 82.65 21 5.2 No 36 -0.74 No 0 0 No -25 0.63 No 45 64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 35717734 + NM_001135729 TOM1 1 1.11 0.25 14 4.67 77.52 28 6.98 Yes 2 1.18 Yes 27 0.82 Yes -27 0.82 Yes 43 90.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 35718991 + NM_001135729 TOM1 1 0.62 0.18 10 6.63 75.19 25 5.57 Yes 12 1.13 Yes 24 0.94 Yes -24 0.87 Yes 46 77.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 35719511 + NM_001135729 TOM1 1 0.96 0.25 14 5.87 71.79 14 5.6 Yes 1 1.08 Yes 25 0.89 Yes -25 0.6 No 45 69.37 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 35729167 + NM_001135729 TOM1 1 0.54 0.17 11 10.88 81.09 27 6.93 Yes 14 2 Yes 26 0.94 Yes -26 0.91 Yes 44 94.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 17750924 - NM_001082968 TOM1L2 1 1.54 0.31 18 10.1 87.32 27 5.48 No 71 0.68 No 0 0 No -26 0.75 Yes 47 76.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 17752171 - NM_001082968 TOM1L2 1 0.7 0.13 8 1.69 75.73 31 6.78 Yes 18 1.6 Yes 0 0 No -30 0.84 Yes 40 84.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 17761170 - NM_001082968 TOM1L2 1 4.99 1.01 39 2.08 80.65 16 5.52 No 3 1.37 Yes 30 0.83 Yes -30 0.97 Yes 40 96.48 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 17765742 - NM_001082968 TOM1L2 1 0.49 0.11 8 5.19 83.07 45 6.71 Yes 51 0.56 No 38 0.23 Yes -38 0.35 No 32 65.94 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 17772849 - NM_001082968 TOM1L2 1 1.24 0.25 15 2.16 79.29 26 4.39 No 14 -2.09 No 0 0 No -19 0.41 No 51 61.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 17812330 - NM_001082968 TOM1L2 1 0.49 0.1 7 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -17 0.38 No 53 68.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 17816924 - NM_001082968 TOM1L2 1 1.64 0.32 19 11.8 94.18 32 5.37 No 58 0.23 No 0 0 No -26 0.45 No 38 31.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235275422 - NM_014765 TOMM20 1 0.12 0.5 26 2.36 82.5 36 7.12 Yes 23 0.51 No 0 0 No -28 0.43 No 42 43.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 235281020 - NM_014765 TOMM20 1 0.07 0.31 16 4.42 71.11 19 4.43 No 48 -2.72 No 0 0 No -26 0.58 No 40 72.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 235282722 - NM_014765 TOMM20 1 1.32 5 71 2.22 0 20 4.47 No 21 1.05 Yes 19 0.92 Yes -19 0.85 Yes 51 82.21 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 235282733 - NM_014765 TOMM20 1 0.04 0.15 11 8.57 82.32 23 6.38 Yes 10 1.05 Yes 19 0.92 Yes -22 0.76 Yes 48 85.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 39078331 + NM_020243 TOMM22 1 0.05 0.26 16 -2 0 29 5.92 Yes 16 0.81 Yes 0 0 No -28 0.89 Yes 42 88.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43579769 - NM_006809 TOMM34 1 0.19 0.25 13 6.32 85.81 52 7.92 Yes 39 1.33 Yes 0 0 No -27 0.64 No 31 60.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 43584032 - NM_006809 TOMM34 1 0.5 0.61 25 8.45 82.29 45 8.15 Yes 23 1.15 Yes 0 0 No -44 0.56 No 35 82.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 45401372 + NM_001128917 TOMM40 1 0.02 0.11 8 6.77 80.58 24 7.03 Yes 58 1.43 Yes 0 0 No -23 0.94 Yes 47 96.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 45404470 + NM_001128917 TOMM40 1 0.36 1.38 48 3.91 0 9 3.87 No 23 1.7 Yes 0 0 No -35 0.65 No 35 91.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 45404644 + NM_001128917 TOMM40 1 1.48 5.47 68 3.28 74.55 31 4.64 No 62 0.09 No 0 0 No -23 0.69 Yes 40 62.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 45406273 + NM_001128917 TOMM40 1 0.09 0.36 20 4.95 80.38 14 5.22 No NA NA NA 20 0.94 Yes -24 0.55 No 54 57.93 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 161198001 + NM_032174 TOMM40L 1 1.05 0.36 19 8.15 86.37 25 5.83 Yes 41 2.17 Yes 0 0 No -24 0.87 Yes 46 80.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37588947 - NM_001001790 TOMM5 1 0.03 0.33 18 3.23 61.52 24 5.28 No 67 -5.9 No 0 0 No -23 0.9 Yes 47 95.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 41757020 + NM_001134493 TOMM6 1 0.03 0.26 14 -0.73 80.75 23 3.63 No 26 0.38 No 0 0 No -38 0.68 Yes 32 73.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 41757305 + NM_001134493 TOMM6 1 0.06 0.13 8 6.77 84.7 33 6.77 Yes 20 1.77 Yes 0 0 No -32 0.9 Yes 38 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 41757246 + NM_001134493 TOMM6 1 0.15 0.33 18 4.18 82.05 16 3.86 No 33 0.24 No 0 0 No -26 0.55 No 44 23.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 41757305 + NM_001134493 TOMM6 1 385.33 879.35 72 6.77 84.7 33 6.77 Yes 20 1.77 Yes 0 0 No -32 0.9 Yes 38 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 22857168 - NM_019059 TOMM7 1 0.04 0.42 25 3.11 75.95 38 5.18 No 17 -2.95 No 25 0.68 Yes -25 0.33 No 41 38.77 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 22857203 - NM_019059 TOMM7 1 0.04 0.36 20 5.81 88.17 24 5.1 No 46 -1.53 No 25 0.68 Yes -23 0.88 Yes 47 92.3 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 22861975 - NM_019059 TOMM7 1 0.17 1.57 57 5.2 74.89 14 5.2 No 1 1.57 Yes 20 0.78 Yes -23 0.74 Yes 53 60.42 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 100087010 - NM_014820 TOMM70 1 0.06 0.19 11 -13.95 0 22 8.84 Yes 9 1.62 Yes 0 0 No -28 0.54 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 100088023 - NM_014820 TOMM70 1 0.13 0.38 21 6.5 81.59 25 5.04 No -3 0.34 No 22 0.77 Yes -24 0.42 No 46 54.07 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 100100530 - NM_014820 TOMM70 1 0.09 0.38 23 4.23 81.3 36 5.4 No 51 1.67 Yes 0 0 No -21 0.59 No 49 70.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 100100578 - NM_014820 TOMM70 1 0.03 0.11 8 7.31 80.18 16 5.98 Yes 3 1.69 Yes 0 0 No -23 0.55 No 47 62.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145655042 - NM_013432 TONSL 1 2.5 1.17 46 6.36 85.47 28 5.25 No 15 0.9 Yes 0 0 No -22 0.79 Yes 48 85.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145655861 - NM_013432 TONSL 1 0.42 0.25 16 -2.24 0 68 4.67 No 27 1.69 Yes 0 0 No -35 0.72 Yes 35 74.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145658627 - NM_013432 TONSL 1 0.28 0.1 7 -0.75 47.7 39 7.73 Yes 26 1.06 Yes 0 0 No -38 0.45 No 32 59.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145659649 - NM_013432 TONSL 1 0.27 0.14 9 -6.44 0 18 4.24 No 22 0.93 Yes 0 0 No -34 0.68 Yes 36 69.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145665561 - NM_013432 TONSL 1 2.93 1.36 50 5.49 78.57 12 5.2 No 41 0.91 Yes 0 0 No -20 0.65 No 50 82.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 145665588 - NM_013432 TONSL 1 0.96 0.47 26 -2.77 0 9 3.87 No 14 0.91 Yes 0 0 No -26 0.52 No 44 56.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145665592 - NM_013432 TONSL 1 0.7 0.38 22 -2.32 79.64 23 4.49 No 10 0.92 Yes 0 0 No -22 0.54 No 43 59.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 145665631 - NM_013432 TONSL 1 0.7 0.33 18 9.87 81.79 27 6.79 Yes 53 0.48 No 25 0.93 Yes -26 0.52 No 44 78.66 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 145666290 - NM_013432 TONSL 1 0.92 0.36 22 -5.85 0 16 4.36 No 64 -4.42 No 30 0.33 Yes -15 0.88 Yes 55 57.57 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 145669430 - NM_013432 TONSL 1 0.59 0.15 8 2.67 73.68 33 6.04 Yes NA NA NA 24 0.42 Yes -32 0.55 No 52 30.78 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 39660474 + NM_003286 TOP1 1 0.04 0.21 12 7.76 93.21 30 5.74 Yes 69 -3.36 No 0 0 No -29 0.36 No 40 36.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 39725465 + NM_003286 TOP1 1 0.08 0.56 31 8.29 83.93 54 6.25 Yes 76 0.62 No 0 0 No -39 0.51 No 17 46.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 39732945 + NM_003286 TOP1 1 0.01 0.11 8 -2.27 68.55 65 8.05 Yes 5 1.91 Yes 0 0 No -26 0.55 No 37 70.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 39750650 + NM_003286 TOP1 1 0.25 1.58 53 -0.84 0 27 5.74 Yes 69 -0.74 No 0 0 No -26 0.83 Yes 44 87.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 144402291 - NM_001258446 TOP1MT 1 0.71 0.22 13 6.8 83.64 22 6.1 Yes 9 0.42 No 0 0 No -22 0.5 No 48 55.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 144407649 - NM_001258446 TOP1MT 1 0.43 0.13 8 7.45 75.8 28 5.19 No 61 2.04 Yes 27 0.83 Yes -27 0.87 Yes 43 81.92 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 144407701 - NM_001258446 TOP1MT 1 0.42 0.17 11 -0.64 67.1 59 6.05 Yes 9 2.09 Yes 0 0 No -31 0.6 No 39 83.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 38548385 - NM_001067 TOP2A 1 0.05 0.24 13 1.49 76.37 16 4.69 No 30 1.08 Yes 23 0.81 Yes -42 0.6 No 28 87.41 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 38551776 - NM_001067 TOP2A 1 0.07 0.29 13 -2.34 62.95 13 4.96 No 21 1.96 Yes 0 0 No -33 0.5 No 26 55.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 25639914 - NM_001330700 TOP2B 1 0.04 0.11 8 7.58 85.61 24 4.65 No 66 -3.21 No 0 0 No -23 0.79 Yes 47 83.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 25641015 - NM_001330700 TOP2B 1 0.15 0.42 22 -4.05 0 15 3.87 No 41 -2.62 No 0 0 No -38 0.41 No 32 30.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 25642702 - NM_001330700 TOP2B 1 0.4 1.1 44 0.55 71.15 21 4.9 No 31 0.62 No 0 0 No -20 0.92 Yes 50 89.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 25659999 - NM_001330700 TOP2B 1 0.07 0.15 11 -4.53 71.92 25 8 Yes 12 1.87 Yes 0 0 No -24 0.63 No 46 66.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 25668109 - NM_001330700 TOP2B 1 0.15 0.32 18 2.05 72.79 25 5.36 No 58 0.74 No 0 0 No -24 0.62 No 50 77.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 25670409 - NM_001330700 TOP2B 1 0.13 0.32 17 5.28 88.63 23 5.1 No 47 1.04 Yes 0 0 No -22 0.7 Yes 51 43.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 25674012 - NM_001330700 TOP2B 1 0.53 1.01 40 5.24 90.17 61 8.03 Yes 76 1.21 Yes 0 0 No -27 0.48 No 43 76.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 25686947 - NM_001330700 TOP2B 1 492.42 86.79 72 4.35 88.52 23 4.89 No 55 1 Yes 25 0.49 Yes -22 0.88 Yes 48 94.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 18188858 - NM_001320759 TOP3A 1 0.25 0.15 11 7.19 82.51 31 5.48 No 40 -1.47 No 19 0.87 Yes -23 0.89 Yes 47 87.68 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 18193262 - NM_001320759 TOP3A 1 0.17 0.11 7 2.72 85.2 33 7.29 Yes 20 1.61 Yes 0 0 No -32 0.76 Yes 38 93.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 18206021 - NM_001320759 TOP3A 1 0.42 0.29 17 0.34 0 16 4.58 No 23 1.61 Yes 0 0 No -35 0.59 No 26 52.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 22312662 - NM_003935 TOP3B 1 0.65 0.19 13 8.45 86.1 32 5.82 Yes 19 0.54 No 0 0 No -31 0.63 No 39 71.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 22313557 - NM_003935 TOP3B 1 0.45 0.13 9 6.14 77.33 35 6.08 Yes 61 0.95 Yes 0 0 No -34 0.88 Yes 36 85.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 22317393 - NM_003935 TOP3B 1 1.88 0.82 39 11.87 89.78 42 7.22 Yes 36 0.02 No 24 0.65 Yes -24 0.78 Yes 46 90 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 22325434 - NM_003935 TOP3B 1 14.93 4.78 71 9.87 91.29 21 5.66 Yes 8 0.81 Yes 20 0.94 Yes -20 0.94 Yes 50 96.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 133336188 - NM_007027 TOPBP1 1 0.31 0.36 19 5.69 80.08 24 4.67 No 66 1 Yes 26 0.84 Yes -23 0.8 Yes 47 72.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 133337274 - NM_007027 TOPBP1 1 0.51 0.56 28 -0.26 0 59 6.29 Yes 7 0.64 No 0 0 No -27 0.65 No 43 77.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 133342034 - NM_007027 TOPBP1 1 0.65 1.01 41 2.45 0 23 5.58 Yes 10 0.43 No 0 0 No -25 0.58 No 45 73.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 133343019 - NM_007027 TOPBP1 1 0.17 0.25 16 -5.08 0 51 7.32 Yes 38 1.19 Yes 0 0 No -50 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 133344130 - NM_007027 TOPBP1 1 0.26 0.38 17 8.85 89.3 41 7.23 Yes 28 0.41 No 0 0 No -34 0.76 Yes 40 68.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 133356959 - NM_007027 TOPBP1 1 0.23 0.33 18 4.5 73.16 26 6.24 Yes 67 1.01 Yes 0 0 No -25 0.74 Yes 45 72.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 133363021 - NM_007027 TOPBP1 1 0.31 0.6 28 7.16 75.32 28 5.45 No 52 1.75 Yes 0 0 No -32 0.55 No 38 60.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 133368786 - NM_007027 TOPBP1 1 0.19 0.18 11 -11.48 0 22 6.71 Yes 9 0.33 No 0 0 No -27 0.39 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 133371392 - NM_007027 TOPBP1 1 5.08 5.85 71 5.36 76.94 26 5.54 No 57 -4.74 No 29 0.67 Yes -29 0.4 No 41 40.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 133371459 - NM_007027 TOPBP1 1 25.63 29.96 72 6.52 88.24 10 4.9 No 53 0.36 No 21 0.57 Yes -36 0.29 No 44 31.13 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 133373274 - NM_007027 TOPBP1 1 0.24 0.24 12 4.23 80.23 29 4.97 No 42 0.71 No 0 0 No -28 0.77 Yes 42 57.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 133373299 - NM_007027 TOPBP1 1 0.54 0.74 32 4.05 74.55 30 6.38 Yes 17 0.72 No 0 0 No -29 0.81 Yes 41 76.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 133379974 - NM_007027 TOPBP1 1 3.49 1.71 61 0.45 0 47 6.49 Yes 34 1.24 Yes 0 0 No -26 0.68 Yes 44 71.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 132580577 - NM_000113 TOR1A 1 0.26 0.54 31 11.61 95.1 30 5.74 Yes 24 1.22 Yes 0 0 No -29 0.93 Yes 41 93.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 132583567 - NM_000113 TOR1A 1 0.15 0.15 10 6.35 92.4 22 5.23 No 9 0.99 Yes 0 0 No -21 0.69 Yes 49 58.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 132585118 - NM_000113 TOR1A 1 1.21 1.81 57 1.71 0 11 4.12 No 16 1.12 Yes 0 0 No -28 0.77 Yes 42 92.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179858444 + NM_015602 TOR1AIP1 1 236.29 41.94 42 5.93 78.01 24 6.84 Yes 29 0.44 No 23 0.76 Yes -30 0.43 No 38 55.8 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 179869263 + NM_015602 TOR1AIP1 1 0.43 0.46 24 1.62 80.24 32 6.28 Yes 65 1.24 Yes 0 0 No -31 0.66 No 39 57.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 179870439 + NM_015602 TOR1AIP1 1 0.07 0.11 8 -8.69 77.3 16 5.81 Yes 73 0.56 No 0 0 No -30 0.74 Yes 40 74.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 179882720 + NM_015602 TOR1AIP1 1 0.21 0.31 14 10.63 82.9 37 7.06 Yes 24 1.55 Yes 36 0.56 Yes -30 0.4 No 38 55.13 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 179834971 - NM_022347 TOR1AIP2 1 0.08 0.11 8 1.13 75 13 4.76 No 25 0.84 Yes 0 0 No -23 0.92 Yes 47 77.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179835005 - NM_022347 TOR1AIP2 1 0.54 0.71 40 -3.03 0 13 3.47 No 60 0.57 No 18 0.74 Yes -42 0.49 No 28 33.1 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 179835005 - NM_022347 TOR1AIP2 1 0.12 0.17 10 -3.03 0 13 3.47 No 60 0.57 No 18 0.74 Yes -42 0.49 No 28 33.1 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 179837707 - NM_022347 TOR1AIP2 1 0.17 0.21 12 6.94 87.64 32 6.28 Yes 6 0.71 No 0 0 No -37 0.43 No 36 70.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 179838420 - NM_022347 TOR1AIP2 1 0.34 0.49 24 9.56 83.21 25 6.45 Yes 12 0.8 Yes 0 0 No -25 0.54 No 45 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 179838420 - NM_022347 TOR1AIP2 1 0.24 0.33 20 9.56 83.21 25 6.45 Yes 12 0.8 Yes 0 0 No -25 0.54 No 45 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 179845313 - NM_022347 TOR1AIP2 1 0.3 0.39 23 4.9 85.3 16 5.09 No 64 0.73 No 24 0.57 Yes -24 0.39 No 55 41.79 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 132566071 + NR_133948 TOR1B 1 1.21 0.25 17 10.47 96.24 27 6.16 Yes 52 -2.5 No 0 0 No -26 0.59 No 44 74.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 132572505 + NR_133948 TOR1B 1 2.91 1.18 50 8.86 87.04 45 7.46 Yes 32 0.54 No 31 0.39 Yes -31 0.67 Yes 39 76.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 130495053 - NM_001252021 TOR2A 1 1.12 0.56 23 5.94 88.67 20 5.1 No 7 1.11 Yes 0 0 No -19 0.77 Yes 51 79.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179051853 + NM_022371 TOR3A 1 0.18 0.26 16 5.7 82.35 25 5 No 74 1.73 Yes 24 0.85 Yes -24 0.78 Yes 46 76.51 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 179051919 + NM_022371 TOR3A 1 0.57 0.89 30 7.29 84.35 33 8.31 Yes 20 1.76 Yes 0 0 No -32 0.93 Yes 38 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179052059 + NM_022371 TOR3A 1 0.94 1.53 45 9.64 82.79 39 6.16 Yes 54 -1.17 No 19 0.97 Yes -33 0.57 No 47 48.3 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 179053833 + NM_022371 TOR3A 1 0.42 0.56 26 7.46 78.91 24 6.13 Yes 3 0.94 Yes 0 0 No -23 0.91 Yes 47 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179054903 + NM_022371 TOR3A 1 1.14 1.56 58 4.43 79.91 45 6.76 Yes 67 -2.05 No 18 0.28 Yes -28 0.37 No 28 32.04 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 179057051 + NM_022371 TOR3A 1 0.42 0.92 36 -4.8 0 15 3.82 No 29 0.93 Yes 0 0 No -34 0.84 Yes 40 67.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 179059895 + NM_022371 TOR3A 1 0.21 0.36 20 -0.03 0 32 6.47 Yes 19 1.02 Yes 0 0 No -31 0.78 Yes 39 84.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 179063236 + NM_022371 TOR3A 1 0.12 0.18 8 -0.23 0 12 4.24 No 18 0.71 No 0 0 No -30 0.92 Yes 40 94.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 42697490 + NM_001098797 TOX2 1 5.04 0.86 35 8.16 76.02 26 5.66 Yes 36 1.3 Yes 0 0 No -25 0.89 Yes 45 81.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 21948176 + NM_014828 TOX4 1 0.09 0.14 9 8.14 85.51 42 6.43 Yes 63 -2.58 No 0 0 No -42 0.61 No 29 30.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 21950710 + NM_014828 TOX4 1 0.36 0.56 26 2.58 69.74 44 6.4 Yes 48 0.47 No 23 0.83 Yes -23 0.91 Yes 47 84.35 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 21960440 + NM_014828 TOX4 1 0.19 0.33 16 7.47 82.63 28 3.22 No 72 0.36 No 18 0.44 Yes -28 0.43 No 42 53.9 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 7576658 - NM_001126112 TP53 1 0.43 1.56 50 5.28 81.54 16 5 No 3 0.3 No 23 0.89 Yes -23 0.91 Yes 47 91.64 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 7576963 - NM_001126112 TP53 1 0.03 0.15 8 0.4 0 21 4.47 No 41 -3.24 No 32 0.88 Yes -20 0.42 No 46 38.27 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 7577159 - NM_001126112 TP53 1 0.11 0.46 24 -4.88 74.28 41 6.98 Yes 28 1.39 Yes 35 0.93 Yes -32 0.93 Yes 38 96.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 43699767 - NM_001141980 TP53BP1 1 0.18 0.11 7 -10.28 0 47 6.36 Yes 45 1.04 Yes 0 0 No -41 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43702725 - NM_001141980 TP53BP1 1 0.37 0.14 10 -13.5 0 11 3.87 No 47 2.24 Yes 0 0 No -59 0.85 Yes 11 93.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43704966 - NM_001141980 TP53BP1 1 0.95 0.39 26 1.59 79.18 22 4.8 No 9 0.77 No 21 0.93 Yes -21 0.71 Yes 49 79.86 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 43705527 - NM_001141980 TP53BP1 1 0.4 0.32 17 0.25 0 9 3.87 No 16 1.38 Yes 22 0.94 Yes -28 0.85 Yes 42 83.29 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 43732544 - NM_001141980 TP53BP1 1 0.36 0.26 19 8.61 85.02 22 6.78 Yes 9 1.36 Yes 0 0 No -21 0.91 Yes 49 91.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43739109 - NM_001141980 TP53BP1 1 0.22 0.17 11 2.42 0 24 6.63 Yes 11 1.93 Yes 23 0.69 Yes -27 0.76 Yes 43 67.36 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 43739113 - NM_001141980 TP53BP1 1 1.39 1 51 7.12 83.89 20 6.32 Yes 7 1.94 Yes 23 0.69 Yes -23 0.86 Yes 47 76.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 43765331 - NM_001141980 TP53BP1 1 1.06 0.81 37 -2.18 0 17 4.12 No 60 0.81 Yes 0 0 No -56 0.53 No 14 50.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 223991120 - NM_005426 TP53BP2 1 0.9 0.32 18 2.73 80.36 24 4.27 No -1 0.52 No 0 0 No -23 0.75 Yes 47 63.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 223992045 - NM_005426 TP53BP2 1 0.33 0.11 7 0.44 0 15 3.87 No 14 1.04 Yes 0 0 No -26 0.81 Yes 44 87.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27896491 + NM_138349 TP53I13 1 0.74 0.28 15 6.96 85.44 31 7.68 Yes 18 1.69 Yes 0 0 No -30 0.78 Yes 40 92.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27898849 + NM_138349 TP53I13 1 4.97 1.01 37 8.64 74.52 38 6.56 Yes 25 0.12 No 37 0.59 Yes -37 0.93 Yes 33 93.79 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 24300729 - NM_147184 TP53I3 1 1.77 4.57 49 11.24 86.37 24 5.31 No 11 0.54 No 0 0 No -23 0.87 Yes 47 75.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24302487 - NM_147184 TP53I3 1 0.62 1.72 37 3.27 78.78 13 4.87 No 0 0.71 No 0 0 No -17 0.42 No 53 69.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24303863 - NM_147184 TP53I3 1 1.83 1.92 44 7.12 82.25 31 4.7 No -2 0.73 No 0 0 No -23 0.52 No 47 69.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24303891 - NM_147184 TP53I3 1 0.19 0.19 10 -4.41 0 16 4.47 No 3 -0.74 No 0 0 No -38 0.36 No 31 60.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24307173 - NM_147184 TP53I3 1 1.12 0.57 21 -1.98 63.61 27 4.34 No 7 -1.93 No 0 0 No -19 0.6 No 51 60.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 24307190 - NM_147184 TP53I3 1 0.33 0.17 7 -5.12 0 15 4.58 No 2 -0.4 No 29 0.47 Yes -36 0.46 No 56 60.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 24307489 - NM_147184 TP53I3 1 0.2 0.18 9 5.96 79.24 37 6.32 Yes 24 0.79 Yes 0 0 No -36 0.73 Yes 34 79.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 95944336 - NM_033285 TP53INP1 1 280.47 49.76 72 7.25 83.16 31 4.48 No 13 0.09 No 25 0.8 Yes -26 0.61 No 45 80.44 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 95952242 - NM_033285 TP53INP1 1 0.53 0.39 11 9.64 92.17 26 5.26 No 75 0.99 Yes 0 0 No -25 0.67 Yes 42 72.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 95957838 - NM_033285 TP53INP1 1 0.44 0.1 7 7 78.66 32 6.08 Yes 19 1.19 Yes 0 0 No -31 0.82 Yes 39 76.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 86955766 - NR_015381 TP53TG1 1 1.71 2.06 52 8.86 90.83 39 7.28 Yes 68 -2.53 No 0 0 No -38 0.8 Yes 32 86.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 86959381 - NR_015381 TP53TG1 1 0.14 0.14 10 4.86 82.01 22 4.73 No -2 1.08 Yes 0 0 No -21 0.57 No 49 84.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 86959411 - NR_015381 TP53TG1 1 1.16 1.15 42 9.85 84.67 43 8.37 Yes 31 -1.22 No 0 0 No -28 0.67 Yes 42 90.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 86961453 - NR_015381 TP53TG1 1 0.42 0.46 25 7.72 77.79 31 5.74 Yes 0 0.58 No 0 0 No -30 0.45 No 44 42.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 3573962 + NM_001204186 TP73 1 0.4 0.17 10 11.27 84.44 62 5.99 Yes NA NA NA 0 0 No -40 0.37 No 20 66.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 3585626 + NM_001204186 TP73 1 1.22 0.4 24 6.81 73.82 21 5.2 No -3 -0.91 No 0 0 No -21 0.59 No 49 49.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 3600180 + NM_001204186 TP73 1 0.14 0.14 8 9.95 86.99 28 5.83 Yes 15 1.48 Yes 0 0 No -27 0.96 Yes 43 96.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 3605546 + NM_001204186 TP73 1 0.24 0.22 12 5.95 90.02 35 6.4 Yes 22 1.15 Yes 0 0 No -22 0.69 Yes 48 64.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 3607310 + NM_001204186 TP73 1 4.04 3.24 57 4.98 77.27 25 6.61 Yes 57 -4.09 No 0 0 No -24 0.66 No 46 76.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 3615968 + NM_001204186 TP73 1 0.19 0.15 10 7.92 87.84 13 4.69 No 71 -5.46 No 0 0 No -26 0.74 Yes 44 57.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 3626291 + NM_001204186 TP73 1 0.16 0.13 8 9.14 78.65 23 5.38 No 47 1.71 Yes 0 0 No -22 0.67 Yes 48 79.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 3628462 + NM_001204186 TP73 1 2.16 1.54 49 6.61 80.63 27 5.74 Yes 68 0.82 Yes 0 0 No -23 0.66 No 44 71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 3639922 + NM_001204186 TP73 1 2.41 1.51 51 -2.32 0 28 5.74 Yes 15 0.76 No 0 0 No -27 0.9 Yes 43 80.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 3656967 - NR_033711 TP73-AS1 1 1.47 0.31 16 3.73 72.6 25 6.19 Yes 12 0.81 Yes 18 0.7 Yes -33 0.61 No 37 82.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 3659082 - NR_033711 TP73-AS1 1 8.84 1.82 59 8.58 90.83 23 5.2 No 36 1.61 Yes 22 0.96 Yes -22 0.89 Yes 48 92.17 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 3659525 - NR_033711 TP73-AS1 1 47.93 4.92 72 4.25 79.47 30 5.66 Yes 17 0.7 No 32 0.76 Yes -29 0.79 Yes 41 94.48 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 3659548 - NR_033711 TP73-AS1 1 2.69 0.26 16 4.66 77.86 22 7.35 Yes 75 0 No 32 0.76 Yes -26 0.74 Yes 44 71.11 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 113663048 + NM_017901 TPCN1 1 128.61 13.25 72 7.55 87.72 24 5.9 Yes 65 1.02 Yes 23 0.84 Yes -23 0.87 Yes 47 94.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 113664535 + NM_017901 TPCN1 1 1.77 0.18 9 -3.11 60.81 38 7.2 Yes 25 0.69 No 0 0 No -40 0.74 Yes 30 83.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 113670151 + NM_017901 TPCN1 1 3.84 1.58 52 11.04 89.6 27 6.56 Yes 53 0.09 No 0 0 No -26 0.72 Yes 44 63.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 113683716 + NM_017901 TPCN1 1 0.6 0.28 15 5.67 80.08 46 7.07 Yes 33 -1.78 No 30 0.37 Yes -30 0.48 No 34 42.83 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 113687416 + NM_017901 TPCN1 1 0.67 0.28 15 4.13 79.44 14 5.1 No 43 1.57 Yes 0 0 No -27 0.46 No 43 29.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 113703988 + NM_017901 TPCN1 1 0.26 0.18 11 -1.83 0 34 6.78 Yes 2 1.09 Yes 0 0 No -25 0.65 No 37 82.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 113705982 + NM_017901 TPCN1 1 1.19 0.44 28 3.61 83.74 29 6.25 Yes 70 2.02 Yes 0 0 No -28 0.86 Yes 42 91.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113711308 + NM_017901 TPCN1 1 0.5 0.36 22 -0.41 79.31 20 4.8 No 47 -3.05 No 0 0 No -16 0.54 No 48 42.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 113715067 + NM_017901 TPCN1 1 1.24 0.74 34 9.29 85.68 26 5.48 No NA NA NA 0 0 No -47 0.57 No 23 73.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 113726199 + NM_017901 TPCN1 1 0.27 0.13 8 5.87 83.51 28 5.18 No -2 0.37 No 0 0 No -28 0.71 Yes 46 55.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 113726299 + NM_017901 TPCN1 1 4.48 1.9 58 9.34 86.22 24 6.75 Yes 11 1.41 Yes 23 0.96 Yes -23 0.93 Yes 47 95.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 113726401 + NM_017901 TPCN1 1 3.75 1.63 53 7.88 90.23 24 5 No 11 1.4 Yes 0 0 No -23 0.87 Yes 47 91.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113727861 + NM_017901 TPCN1 1 0.19 0.1 7 4.69 85.58 20 5.1 No 65 -4.34 No 0 0 No -17 0.34 No 53 46.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 113728563 + NM_017901 TPCN1 1 0.23 0.14 9 7.11 82.06 30 5.48 No 74 0.58 No 0 0 No -29 0.82 Yes 41 84.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 113729714 + NM_017901 TPCN1 1 0.57 0.33 20 1.5 83.31 28 5.75 Yes 15 0.98 Yes 0 0 No -27 0.5 No 40 62.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 113730495 + NM_017901 TPCN1 1 0.36 0.18 11 8.19 79.6 21 6.08 Yes 8 1.94 Yes 0 0 No -20 0.83 Yes 50 82.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 113731910 + NM_017901 TPCN1 1 2.97 1.31 49 10.68 87.07 32 7.53 Yes 19 0.48 No 34 0.68 Yes -34 0.45 No 39 67.69 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 68817007 + NM_139075 TPCN2 1 1.01 0.11 8 0.82 66.39 27 6.48 Yes 36 0.63 No 0 0 No -26 0.64 No 44 72.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 68817010 + NM_139075 TPCN2 1 2.84 0.29 17 -1.58 63.04 30 6.71 Yes 39 0.62 No 0 0 No -29 0.65 No 41 65.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 68834973 + NM_139075 TPCN2 1 1.47 0.15 11 6.81 91.19 20 5.27 No 45 -1.21 No 0 0 No -30 0.49 No 46 79.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 68834973 + NM_139075 TPCN2 1 19.62 1.81 60 6.81 91.19 20 5.27 No 45 -1.21 No 0 0 No -30 0.49 No 46 79.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 68838703 + NM_139075 TPCN2 1 1.48 0.33 22 3.68 74.73 38 8.67 Yes 25 1.91 Yes 0 0 No -37 0.91 Yes 33 73.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68838723 + NM_139075 TPCN2 1 10.04 2.54 60 5.18 84.64 18 5.21 No 45 1.9 Yes 0 0 No -57 0.49 No 48 40.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 68846907 + NM_139075 TPCN2 1 1.16 0.19 11 10.22 87.41 18 6.78 Yes 5 1.23 Yes 0 0 No -17 0.82 Yes 53 94.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 68847090 + NM_139075 TPCN2 1 2.05 0.32 19 5.31 76.13 45 6.78 Yes 32 1.36 Yes 0 0 No -44 0.67 Yes 26 76.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 80950461 - NM_001025252 TPD52 1 0.08 0.21 12 -1.22 0 13 4.18 No 30 1.02 Yes 0 0 No -45 0.74 Yes 25 80.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 80950464 - NM_001025252 TPD52 1 4.66 13.53 72 -4.1 0 10 3.79 No 27 1.04 Yes 0 0 No -42 0.75 Yes 28 82.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 80954902 - NM_001025252 TPD52 1 0.06 0.24 13 -11.07 0 31 7.07 Yes 31 0.32 No 0 0 No -30 0.93 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 80954903 - NM_001025252 TPD52 1 0.03 0.13 9 -10.92 0 30 7 Yes 30 0.32 No 0 0 No -29 0.93 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 80956444 - NM_001025252 TPD52 1 0.04 0.14 9 5.87 70.66 37 7.61 Yes 24 2.43 Yes 36 0.83 Yes -36 0.65 No 34 92.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 80962707 - NM_001025252 TPD52 1 0.52 1.86 57 9.69 87.52 46 6.95 Yes 5 1.19 Yes 23 0.79 Yes -23 0.62 No 47 44.81 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 80964911 - NM_001025252 TPD52 1 0.39 1.38 51 1.03 73.98 26 5.2 No 13 0.67 No 25 0.74 Yes -25 0.5 No 45 57.04 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 80965662 - NM_001025252 TPD52 1 0.2 0.36 20 -1.55 0 48 4.56 No 31 1.1 Yes 0 0 No -26 0.67 Yes 19 88.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 80974336 - NM_001025252 TPD52 1 0.19 0.44 20 4.4 77.31 35 7.61 Yes 22 0.45 No 0 0 No -34 0.83 Yes 36 91.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 62500717 + NM_199360 TPD52L2 1 0.14 0.13 9 5.71 84.39 31 5.18 No 18 1.14 Yes 30 0.84 Yes -30 0.55 No 40 57.99 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 62507153 + NM_199360 TPD52L2 1 0.1 0.18 7 5.14 72.68 42 4.44 No 22 0.49 No 22 0.94 Yes -29 0.44 No 41 54.08 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 62514102 + NM_199360 TPD52L2 1 0.62 1.15 50 3.39 84.21 18 4.9 No 63 1.69 Yes 0 0 No -17 0.68 Yes 53 90.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62514102 + NM_199360 TPD52L2 1 1.75 3.11 70 3.39 84.21 18 4.9 No 63 1.69 Yes 0 0 No -17 0.68 Yes 53 90.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62520734 + NM_199360 TPD52L2 1 1.04 2.21 58 7.23 82.73 30 5.01 No 20 0.62 No 0 0 No -28 0.69 Yes 42 76.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 34385361 - NM_001271954 TPGS2 1 0.05 0.1 7 3.85 75.85 47 5.38 No 6 1.59 Yes 26 0.88 Yes -26 0.76 Yes 44 59.72 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr18 34386060 - NM_001271954 TPGS2 1 0.04 0.1 7 5.16 76.08 35 6.08 Yes 71 1.71 Yes 34 0.74 Yes -34 0.78 Yes 36 96.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 34387895 - NM_001271954 TPGS2 1 0.82 1.65 47 0.17 70.32 29 5.38 No 16 1.11 Yes 0 0 No -28 0.65 No 42 92.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 34401093 - NM_001271954 TPGS2 1 0.14 0.24 13 8.18 76.01 42 5.67 Yes 2 0.02 No 25 0.7 Yes -25 0.6 No 45 78.42 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr18 34403835 - NM_001271954 TPGS2 1 1.49 2.44 63 8.38 83.93 24 5.44 No -4 0.78 Yes 26 0.59 Yes -26 0.85 Yes 44 91.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 6978263 + NM_001258026 TPI1 1 0.01 0.17 10 -9.89 0 28 7.16 Yes 15 1.75 Yes 0 0 No -26 0.84 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 6978433 + NM_001258026 TPI1 1 0 0.11 7 -2.11 0 18 4.46 No 21 1.2 Yes 0 0 No -33 0.92 Yes 37 97.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6979199 + NM_001258026 TPI1 1 0.15 4.86 70 -4.09 0 12 5 No 31 0.74 No 31 0.63 Yes -7 0.39 No 59 41.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 6979218 + NM_001258026 TPI1 1 0.01 0.29 18 -1.15 0 9 3.87 No 50 0.74 No 0 0 No -26 0.93 Yes 44 88.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6979405 + NM_001258026 TPI1 1 0.24 4.85 71 0.77 69.41 19 5.57 Yes 6 1.15 Yes 29 0.93 Yes -18 0.78 Yes 52 77.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 144217329 - NM_022445 TPK1 1 1.15 0.21 13 9.17 84.7 12 5.53 No -1 0.71 No 0 0 No -29 0.79 Yes 41 73.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 144228263 - NM_022445 TPK1 1 3.53 0.74 34 10.04 86.4 31 5.54 No 55 2.27 Yes 30 0.88 Yes -30 0.58 No 40 83.3 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr7 144297608 - NM_022445 TPK1 1 0.52 0.13 7 4.74 84.41 26 6.72 Yes 13 1.31 Yes 0 0 No -25 0.62 No 45 84.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 144304144 - NM_022445 TPK1 1 3.84 0.5 24 6.33 82.15 26 6.15 Yes 10 0.63 No 31 0.44 Yes -25 0.65 No 45 72 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 144343257 - NM_022445 TPK1 1 7.26 1.72 57 4.26 75.88 20 5.18 No 7 1.54 Yes 0 0 No -25 0.55 No 45 70.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 144345719 - NM_022445 TPK1 1 1.17 0.29 16 5 82.42 17 7.38 Yes 4 0.75 No 0 0 No -29 0.69 Yes 41 67.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 144364940 - NM_022445 TPK1 1 6.07 1.15 49 4.49 79.26 30 7.97 Yes 17 1.33 Yes 29 0.86 Yes -29 0.87 Yes 41 93.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 144364940 - NM_022445 TPK1 1 2.72 0.46 27 4.49 79.26 30 7.97 Yes 17 1.33 Yes 29 0.86 Yes -29 0.87 Yes 41 93.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 144378958 - NM_022445 TPK1 1 24.26 3.42 69 8.84 86.97 35 7.32 Yes 22 1.18 Yes 34 0.85 Yes -35 0.61 No 35 69.08 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 144382574 - NM_022445 TPK1 1 0.6 0.19 13 9.94 93.89 33 5.92 Yes 73 -4.17 No 0 0 No -32 0.72 Yes 45 73.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 144406576 - NM_022445 TPK1 1 0.36 0.13 9 8.93 85.68 35 5.61 Yes 12 0.35 No 20 0.35 Yes -24 0.38 No 33 35.25 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 144446604 - NM_022445 TPK1 1 0.36 0.13 9 8.3 89.9 29 6.96 Yes 16 0.57 No 0 0 No -28 0.89 Yes 42 84.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154142942 - NM_152263 TPM3 1 0.63 10.97 72 2.58 0 23 7 Yes 14 1.44 Yes 0 0 No -26 0.84 Yes 44 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154144580 - NM_152263 TPM3 1 2.67 0.21 14 -15.77 0 108 10.84 Yes 45 1.54 Yes 23 0.7 Yes -57 0.42 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 154144581 - NM_152263 TPM3 1 23319.36 1364.71 72 5.19 75.02 107 10.81 Yes 44 1.54 Yes 23 0.7 Yes -56 0.39 No 14 62.42 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 154144581 - NM_152263 TPM3 1 3.25 0.18 11 5.19 75.02 107 10.81 Yes 44 1.54 Yes 23 0.7 Yes -56 0.39 No 14 62.42 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 154145676 - NM_152263 TPM3 1 0.02 0.25 14 -3.37 77.61 31 6.08 Yes 40 0.19 No 22 0.64 Yes -30 0.84 Yes 40 84.22 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 154146138 - NM_152263 TPM3 1 0.01 0.13 9 3.2 84.41 28 5.29 No 15 0.46 No 0 0 No -27 0.58 No 43 87.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 16191724 + NM_003290 TPM4 1 0.03 0.21 12 10.61 89.23 31 7.05 Yes 18 1 Yes 30 0.88 Yes -30 0.64 No 40 86.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 16197234 + NM_003290 TPM4 1 0.02 0.18 12 -5.36 77.29 22 4.98 No 9 0.99 Yes 0 0 No -21 0.91 Yes 49 91.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16197740 + NM_003290 TPM4 1 0.02 0.19 14 9.82 86.01 69 8.48 Yes 56 0.63 No 0 0 No -32 0.72 Yes 24 65.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 16199292 + NM_003290 TPM4 1 0.02 0.28 15 6.88 86.14 21 5.79 Yes 46 1.12 Yes 0 0 No -28 0.69 Yes 42 57.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 16199855 + NM_003290 TPM4 1 0.04 0.53 26 -14.98 0 31 6.08 Yes 41 -2.34 No 0 0 No -28 0.58 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 16199856 + NM_003290 TPM4 1 0.04 0.54 31 -8.11 0 32 6.16 Yes 42 -2.34 No 0 0 No -29 0.57 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 16203849 + NM_003290 TPM4 1 0.02 0.33 15 5.88 78.78 20 6.2 Yes 7 1.03 Yes 0 0 No -19 0.53 No 51 68.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 16204347 + NM_003290 TPM4 1 0.02 0.33 18 -29.22 0 29 5.38 No 16 0.1 No 29 0.78 Yes -29 0.9 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 16204791 + NM_003290 TPM4 1 0.01 0.1 7 -2.44 83.05 38 7.07 Yes 25 0.78 Yes 0 0 No -37 0.78 Yes 33 78.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 16206073 + NM_003290 TPM4 1 0.14 2.25 58 6.34 76 109 11.62 Yes 19 1.24 Yes 31 0.7 Yes -34 0.41 No 39 63.97 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 16212075 + NM_003290 TPM4 1 0.09 1.47 52 -3.96 67.13 37 5.61 Yes 24 0.89 Yes 0 0 No -36 0.69 Yes 30 70.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 18133798 - NM_001346817 TPMT 1 0.42 0.4 23 4.37 77.73 47 6.7 Yes 76 0.84 Yes 0 0 No -49 0.35 No 21 68.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 18136432 - NM_001346817 TPMT 1 0.17 0.13 8 5.84 77.91 17 7.32 Yes 4 0.52 No 0 0 No -34 0.54 No 54 47.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 6636777 - NM_000391 TPP1 1 0.34 0.46 24 3.39 79.12 20 5.1 No 74 1.75 Yes 0 0 No -43 0.41 No 27 86.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 6637080 - NM_000391 TPP1 1 0.1 0.17 8 14.13 96.53 48 5.76 Yes 67 0.79 Yes 0 0 No -23 0.87 Yes 47 87.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 103259981 + NM_003291 TPP2 1 0.44 1 46 3.95 84 15 4.32 No 2 0.98 Yes 26 0.77 Yes -26 0.7 Yes 38 51.36 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 103269305 + NM_003291 TPP2 1 0.34 0.65 27 6.03 90.61 25 5 No 74 0.26 No 0 0 No -24 0.63 No 10 57.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 103271055 + NM_003291 TPP2 1 0.1 0.18 10 2.75 70.36 12 5.39 No 54 0.76 No 21 0.89 Yes -24 0.27 No 59 51.48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 103273236 + NM_003291 TPP2 1 0.1 0.26 17 11.23 84.77 29 6.27 Yes 16 1.39 Yes 0 0 No -28 0.9 Yes 42 86.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 103275228 + NM_003291 TPP2 1 0.08 0.22 13 -4.38 69.15 37 6.88 Yes 24 0.42 No 0 0 No -30 0.78 Yes 40 54.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 103283629 + NM_003291 TPP2 1 0.16 0.32 17 11.22 86.62 27 5.37 No 33 0.9 Yes 26 0.89 Yes -26 0.71 Yes 44 92.07 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 103289044 + NM_003291 TPP2 1 0.98 2.28 64 9.1 83.15 39 7.31 Yes 53 1.26 Yes 0 0 No -36 0.33 No 39 44.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 103292621 + NM_003291 TPP2 1 0.05 0.11 8 -9.55 71.4 24 5.26 No 8 0.43 No 0 0 No -28 0.43 No 42 58.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 103292648 + NM_003291 TPP2 1 0.7 1.57 54 4.17 65.5 26 4.68 No 35 0.42 No 0 0 No -24 0.34 No 53 40.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 103298629 + NM_003291 TPP2 1 0.17 0.32 17 -6.21 0 16 4.1 No 19 -1.72 No 20 0.77 Yes -35 0.67 Yes 35 65.68 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr13 103301742 + NM_003291 TPP2 1 0.08 0.19 13 1.79 0 47 7.48 Yes 34 1.02 Yes 31 0.04 Yes -33 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 103303688 + NM_003291 TPP2 1 0.38 0.99 39 9.85 93.21 19 5.48 No 54 -1.19 No 24 0.95 Yes -21 0.52 No 49 59.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 103303708 + NM_003291 TPP2 1 16.99 42.32 72 7.58 87.24 25 5.39 No -4 1.18 Yes 24 0.95 Yes -24 0.96 Yes 46 98.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 103311083 + NM_003291 TPP2 1 0.11 0.32 14 2.09 81.89 24 4.74 No 47 0.2 No 0 0 No -23 0.76 Yes 47 52.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 103314096 + NM_003291 TPP2 1 0.06 0.17 9 5.17 77.39 30 6.33 Yes 65 -4 No 0 0 No -29 0.74 Yes 41 71.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 103315991 + NM_003291 TPP2 1 0.06 0.19 11 2.06 0 23 5.74 Yes 10 0.32 No 28 0.45 Yes -22 0.5 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 103320107 + NM_003291 TPP2 1 4.52 11.43 72 10.53 86.51 18 5.37 No 18 0.86 Yes 30 0.56 Yes -30 0.76 Yes 40 71.38 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 186283158 - NM_003292 TPR 1 0.12 0.25 13 -2.63 0 21 6.21 Yes 8 0.62 No 0 0 No -26 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 186289566 - NM_003292 TPR 1 1.18 3.19 70 3.71 67.34 25 6.02 Yes 68 1.74 Yes 22 0.87 Yes -24 0.85 Yes 46 89.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 186291539 - NM_003292 TPR 1 0.21 0.49 27 0.86 0 9 3.87 No 15 1.74 Yes 0 0 No -27 0.92 Yes 43 92.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 186300729 - NM_003292 TPR 1 0.3 0.6 27 2.25 62.04 39 6.89 Yes 26 1.6 Yes 24 0.76 Yes -22 0.65 No 48 70.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 186301460 - NM_003292 TPR 1 0.19 0.44 20 3.68 76.16 26 4.98 No 67 0.78 Yes 0 0 No -25 0.51 No 45 55.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 186301494 - NM_003292 TPR 1 0.37 0.86 40 4.89 74.13 31 5.26 No 33 0.77 Yes 25 0.93 Yes -30 0.72 Yes 40 69.74 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 186319508 - NM_003292 TPR 1 0.06 0.14 8 5.76 73.9 18 4.69 No 14 0.92 Yes 0 0 No -26 0.48 No 44 51.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 186323013 - NM_003292 TPR 1 0.2 0.47 26 -0.46 74.4 20 4.63 No 26 0.2 No 19 0.85 Yes -19 0.88 Yes 51 78.89 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 186324685 - NM_003292 TPR 1 0.12 0.26 17 2.48 0 15 3.87 No 20 0.5 No 0 0 No -24 0.82 Yes 38 69.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 186324820 - NM_003292 TPR 1 0.25 0.67 30 6.14 81.51 27 5.57 Yes 54 0.57 No 0 0 No -29 0.59 No 44 81.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 186324852 - NM_003292 TPR 1 0.1 0.25 15 -3.57 54.16 35 6.72 Yes 22 0.57 No 0 0 No -39 0.87 Yes 31 86.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 186325872 - NM_003292 TPR 1 0.4 0.97 44 6.1 73.86 38 5.14 No -1 0.73 No 0 0 No -25 0.65 No 45 72.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 186327780 - NM_003292 TPR 1 0.13 0.31 17 -13.44 62.77 25 5.53 No 12 0.12 No 0 0 No -24 0.89 Yes 46 79.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 186329517 - NM_003292 TPR 1 0.07 0.21 12 3.4 59.45 28 4.13 No 24 0.85 Yes 25 0.65 Yes -36 0.56 No 34 73.67 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 127295099 - NM_001142646 TPRA1 1 1.25 1.06 44 3.23 70.71 30 7.35 Yes 46 -0.98 No 0 0 No -38 0.84 Yes 32 87.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 127296720 - NM_001142646 TPRA1 1 0.17 0.13 8 6.19 79.87 24 6.4 Yes 11 0.85 Yes 0 0 No -23 0.86 Yes 47 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 127298649 - NM_001142646 TPRA1 1 0.29 0.24 14 4.44 72.62 40 8.67 Yes 6 1.12 Yes 0 0 No -39 0.59 No 31 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 73957155 - NM_001330391 TPRKB 1 0.15 0.32 17 -16.23 0 24 4.88 No 65 0.73 No 0 0 No -26 0.4 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 73959395 - NM_001330391 TPRKB 1 6.52 0.25 16 6.76 84.86 12 5.2 No 29 0.88 Yes 0 0 No -45 0.71 Yes 29 62.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 73959828 - NM_001330391 TPRKB 1 7.77 0.39 20 3.99 0 36 6.32 Yes 23 0.63 No 35 0.45 Yes -35 0.59 No 35 79.67 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 73961656 - NM_001330391 TPRKB 1 3.4 0.47 22 6.49 86.52 33 5.66 Yes 20 0.28 No 0 0 No -28 0.42 No 38 58.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 73961719 - NM_001330391 TPRKB 1 438.68 57.44 72 6.21 85.03 43 5.79 Yes 30 0.69 No 31 0.17 Yes -42 0.49 No 28 49.48 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 73963884 - NM_001330391 TPRKB 1 1.68 0.22 12 3.31 71.94 27 4.66 No 4 0.14 No 0 0 No -26 0.77 Yes 44 86.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 140087138 - NM_001128228 TPRN 1 0.31 0.13 8 -3.75 0 15 3.87 No 24 1.18 Yes 0 0 No -25 0.86 Yes 45 75.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 65670780 + NM_003596 TPST1 1 0.61 0.1 7 11.96 83.01 94 11.56 Yes NA NA NA 22 0.59 Yes -22 0.68 Yes 47 33.74 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 65713515 + NM_003596 TPST1 1 3.32 0.79 36 3.01 0 30 6 Yes 68 -3.37 No 0 0 No -29 0.85 Yes 41 83.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 65787191 + NM_003596 TPST1 1 1.21 0.19 13 11.83 84.24 35 3.84 No 22 1.12 Yes 0 0 No -23 0.7 Yes 47 68.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 65787780 + NM_003596 TPST1 1 1.57 0.33 18 10.56 99.17 31 5.48 No 22 0.56 No 0 0 No -28 0.84 Yes 42 90.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 65795920 + NM_003596 TPST1 1 0.56 0.11 7 9 82.26 34 7.23 Yes 44 0.36 No 0 0 No -33 0.58 No 44 60.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 26923654 - NM_001008566 TPST2 1 0.56 0.38 21 6.48 88.48 23 5.81 Yes 42 0.68 No 0 0 No -20 0.74 Yes 50 76.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 26930944 - NM_001008566 TPST2 1 0.34 0.22 12 3.43 0 20 4.58 No 46 0.64 No 0 0 No -19 0.86 Yes 51 91.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 26939244 - NM_001008566 TPST2 1 0.34 0.13 8 7.95 88.34 22 4.89 No 9 1.02 Yes 21 0.88 Yes -21 0.87 Yes 49 72.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 45911447 - NM_001286273 TPT1 1 0 0.14 8 4.43 69.47 76 8.63 Yes 21 0.94 Yes 0 0 No -33 0.46 No 37 57.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 45911523 - NM_001286273 TPT1 1 0 0.15 9 -14.79 0 23 5 No 10 0.87 Yes 0 0 No -22 0.9 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 45911539 - NM_001286273 TPT1 1 0.02 3.64 67 0.52 61.35 24 5.98 Yes 62 -5.59 No 21 0.92 Yes -23 0.54 No 47 44.56 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 45912828 - NM_001286273 TPT1 1 0 0.14 7 -17.1 0 16 5.67 Yes 3 0.42 No 0 0 No -15 0.48 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 45912884 - NM_001286273 TPT1 1 0 0.35 17 -0.36 62.79 31 5.63 Yes 44 1 Yes 0 0 No -56 0.76 Yes 14 91.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 45912921 - NM_001286273 TPT1 1 0 0.42 24 -10.06 0 20 4.58 No 65 1.28 Yes 28 0.94 Yes -19 0.9 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 45912933 - NM_001286273 TPT1 1 0.01 0.99 46 2.43 0 16 4.47 No 53 1.27 Yes 28 0.94 Yes -20 0.45 No 50 55 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 45912944 - NM_001286273 TPT1 1 0 0.1 7 4.74 72.35 26 6.56 Yes 42 1.27 Yes 28 0.94 Yes -25 0.78 Yes 45 56.13 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 45913682 - NM_001286273 TPT1 1 0.01 1.75 58 1.68 87.5 17 5.2 No 4 0.48 No 20 0.67 Yes -24 0.43 No 46 40.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 45913730 - NM_001286273 TPT1 1 0 0.35 20 -3.02 0 11 4.12 No 13 0.42 No 0 0 No -34 0.69 Yes 36 82.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 45913734 - NM_001286273 TPT1 1 0 0.38 16 -19.66 0 22 8.85 Yes 9 0.44 No 0 0 No -21 0.7 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 45913737 - NM_001286273 TPT1 1 0 0.39 20 -12.34 0 19 8.7 Yes 6 0.46 No 0 0 No -27 0.85 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 45914921 - NM_001286273 TPT1 1 12480.63 9181.76 72 6.32 80.06 26 6.63 Yes 13 0.9 Yes 25 0.87 Yes -25 0.92 Yes 45 88.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 45914956 - NM_001286273 TPT1 1 12.62 10.13 52 -3.8 67.12 48 7.51 Yes NA NA NA 24 0.52 Yes -24 0.2 No 55 19.6 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 20126817 - NR_073485 TPTE2 1 6.43 0.56 27 -4.58 60.74 72 9.45 Yes 59 1.42 Yes 0 0 No -25 0.79 Yes 13 47.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 30345212 + NM_012112 TPX2 1 0.05 0.14 9 5.43 83.12 38 4.29 No 35 0.52 No 0 0 No -27 0.67 Yes 43 71.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30332353 + NM_012112 TPX2 1 0.27 0.56 24 3.64 0 43 8.24 Yes 30 1.04 Yes 0 0 No -42 0.86 Yes 28 89.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30345212 + NM_012112 TPX2 1 1.05 2.1 62 5.43 83.12 38 4.29 No 35 0.52 No 0 0 No -27 0.67 Yes 43 71.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 30358148 + NM_012112 TPX2 1 1.21 2.31 60 -0.56 69.25 35 7.06 Yes 74 1.01 Yes 0 0 No -34 0.9 Yes 36 90.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 30368741 + NM_012112 TPX2 1 0.16 0.4 23 9.69 86.13 35 4.14 No 48 1.47 Yes 26 0.77 Yes -34 0.38 No 40 53.06 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 30386188 + NM_012112 TPX2 1 10.91 18.08 72 6.1 80.22 24 5.29 No 57 -0.54 No 0 0 No -23 0.9 Yes 47 89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 23545430 - NM_013293 TRA2A 1 2.9 14.83 72 -0.39 74.46 22 5.23 No 9 0.92 Yes 22 0.91 Yes -25 0.74 Yes 45 86.01 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 23556082 - NM_013293 TRA2A 1 0.47 2.01 65 8.57 82.26 28 4.97 No -2 0.67 No 0 0 No -27 0.33 No 43 62.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 23556082 - NM_013293 TRA2A 1 0.06 0.22 14 8.57 82.26 28 4.97 No -2 0.67 No 0 0 No -27 0.33 No 43 62.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 23562052 - NM_013293 TRA2A 1 9.41 21.43 72 8.88 86.54 21 7.58 Yes 8 1.22 Yes 20 0.65 Yes -30 0.56 No 40 75.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr7 23570890 - NM_013293 TRA2A 1 3.14 7.24 71 10 84.51 37 6.56 Yes NA NA NA 36 0.18 Yes -36 0.7 Yes 34 74.16 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 185635537 - NM_001243879 TRA2B 1 0.02 0.14 7 1.12 68.47 23 4.07 No 56 -4.38 No 26 0.79 Yes -25 0.41 No 48 50.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 185636224 - NM_001243879 TRA2B 1 2.1 8.68 72 0.91 81.69 18 5.78 Yes 5 0.88 Yes 25 0.88 Yes -28 0.84 Yes 42 92.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 185638970 - NM_001243879 TRA2B 1 0.02 0.18 11 0.46 0 11 3.87 No 13 0.62 No 0 0 No -30 0.71 Yes 40 71.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 185638973 - NM_001243879 TRA2B 1 0.02 0.15 10 -4.81 0 23 4.83 No 10 0.61 No 0 0 No -27 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 185639918 - NM_001243879 TRA2B 1 0.05 0.4 22 -2.31 0 20 6.16 Yes 7 0.75 No 22 0.82 Yes -19 0.77 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 185644523 - NM_001243879 TRA2B 1 3810.94 359.49 72 6.68 74.5 23 6.4 Yes 69 1.71 Yes 22 0.49 Yes -22 0.43 No 48 55.37 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 185649641 - NM_001243879 TRA2B 1 279.66 24.65 72 10.29 87.32 34 5.38 No 10 0.63 No 22 0.85 Yes -22 0.39 No 48 53.2 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 50635865 + NM_001320487 TRABD 1 1.63 2.85 61 1.86 72.56 42 6.78 Yes 29 0.26 No 21 0.6 Yes -41 0.91 Yes 29 96.03 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 50636255 + NM_001320487 TRABD 1 1.35 1.94 59 -1.47 0 19 5.39 No NA NA NA 0 0 No -22 0.81 Yes 48 73.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50636800 + NM_001320487 TRABD 1 2.01 3.1 63 8.26 83.34 32 6 Yes NA NA NA 0 0 No -31 0.43 No 41 77.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 50637544 + NM_001320487 TRABD 1 0.52 0.81 36 4.18 84.27 14 4.69 No 1 0.49 No 22 0.87 Yes -22 0.48 No 52 81.91 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 67190103 - NM_003789 TRADD 1 6.19 2.33 65 9.94 86.72 41 8.36 Yes 42 1.58 Yes 40 0.78 Yes -40 0.86 Yes 30 89.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 67190103 - NM_003789 TRADD 1 0.43 0.18 12 9.94 86.72 41 8.36 Yes 42 1.58 Yes 40 0.78 Yes -40 0.86 Yes 30 89.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 123671132 - NM_001190945 TRAF1 1 0.02 0.13 9 1.76 72.77 23 5.99 Yes 20 -2.23 No 0 0 No -22 0.69 Yes 48 60.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 123671749 - NM_001190945 TRAF1 1 0.09 0.44 26 0.28 72.76 24 6.78 Yes 11 2.24 Yes 0 0 No -23 0.91 Yes 47 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123671909 - NM_001190945 TRAF1 1 0.03 0.13 8 5.81 0 21 3.91 No 2 0.74 No 0 0 No -20 0.72 Yes 50 68.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 123673774 - NM_001190945 TRAF1 1 0.08 0.33 16 -6.39 0 12 4.24 No 23 0.83 Yes 0 0 No -35 0.59 No 36 35.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123673804 - NM_001190945 TRAF1 1 0.03 0.14 10 4.07 73.6 31 4.15 No 53 -0.28 No 19 0.17 Yes -30 0.42 No 40 36.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 123675936 - NM_001190945 TRAF1 1 0.03 0.18 12 2.2 67.21 28 4.93 No 15 0.87 Yes 0 0 No -27 0.74 Yes 43 79.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123676012 - NM_001190945 TRAF1 1 0.03 0.26 14 -2.39 0 28 5.55 No 36 1.64 Yes 0 0 No -27 0.77 Yes 43 80.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123676034 - NM_001190945 TRAF1 1 0.03 0.22 14 5.44 82.53 27 7.73 Yes 14 1.67 Yes 22 0.97 Yes -26 0.95 Yes 44 95.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 123676533 - NM_001190945 TRAF1 1 0.05 0.29 15 8.38 89.11 28 5.83 Yes 53 0.87 Yes 0 0 No -27 0.79 Yes 43 82.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 123676567 - NM_001190945 TRAF1 1 0.02 0.13 7 -4.05 0 21 4.56 No -4 0.9 Yes 0 0 No -31 0.46 No 31 59.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123679696 - NM_001190945 TRAF1 1 0.88 5.5 67 10.34 85.59 32 5.51 No 27 0.9 Yes 0 0 No -32 0.35 No 38 58.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123684970 - NM_001190945 TRAF1 1 1.58 9.17 69 12.5 87.32 37 6.24 Yes 24 0.72 No 0 0 No -36 0.85 Yes 34 93.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 123686092 - NM_001190945 TRAF1 1 0.02 0.17 9 2.99 78.71 13 4.8 No 67 0.43 No 24 0.69 Yes -16 0.71 Yes 54 71.66 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 123687423 - NM_001190945 TRAF1 1 0.29 2.19 44 9.09 82.76 24 7.47 Yes 11 1.45 Yes 0 0 No -23 0.44 No 39 63.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 123688541 - NM_001190945 TRAF1 1 3.22 1.18 44 2.35 75.29 31 5.48 No 30 0.4 No 0 0 No -30 0.77 Yes 43 57.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 123688573 - NM_001190945 TRAF1 1 0.6 0.19 14 -3.92 0 11 4 No 56 2.11 Yes 0 0 No -24 0.61 No 46 40.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139810998 + NM_021138 TRAF2 1 0.28 0.26 16 4.21 0 15 3.87 No 11 1.41 Yes 0 0 No -23 0.87 Yes 47 82.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139814689 + NM_021138 TRAF2 1 0.29 0.21 12 0.08 0 32 5.92 Yes 73 0.5 No 0 0 No -28 0.56 No 42 75.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 139815469 + NM_021138 TRAF2 1 0.3 0.26 15 -8.99 0 10 4 No -3 -0.59 No 23 0.7 Yes -10 0.6 No 60 32.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 139818207 + NM_021138 TRAF2 1 0.46 0.44 24 10 89.91 16 5.48 No 3 0.82 Yes 0 0 No -21 0.38 No 49 45.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 139820100 + NM_021138 TRAF2 1 0.14 0.13 8 -6.55 0 20 4.47 No 76 0.94 Yes 34 0.14 Yes -23 0.22 No 19 26.63 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 103245066 + NM_145725 TRAF3 1 7.83 4.65 69 7.82 84.63 32 5.64 Yes 19 0.36 No 0 0 No -31 0.61 No 39 60.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 103257542 + NM_145725 TRAF3 1 0.86 0.44 27 7.53 86.16 21 7.21 Yes 8 1.25 Yes 0 0 No -20 0.86 Yes 50 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103300396 + NM_145725 TRAF3 1 0.94 1.89 49 2.72 77.37 23 5.18 No 10 -0.15 No 0 0 No -22 0.87 Yes 48 93.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 103300399 + NM_145725 TRAF3 1 1.02 1.97 49 7.24 83.38 26 5.46 No 13 -0.15 No 0 0 No -25 0.83 Yes 45 92.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 103303146 + NM_145725 TRAF3 1 0.58 1.07 39 11.7 86.67 17 6.46 Yes 4 1.69 Yes 0 0 No -29 0.65 No 41 72.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 103313696 + NM_145725 TRAF3 1 0.06 0.1 7 3.57 80.12 20 5.57 Yes 7 1.24 Yes 0 0 No -19 0.78 Yes 51 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103324515 + NM_145725 TRAF3 1 0.08 0.15 10 2.49 0 43 6.86 Yes 30 1.21 Yes 0 0 No -42 0.53 No 28 44.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 103327861 + NM_145725 TRAF3 1 0.2 0.4 24 5.84 87.79 24 6.55 Yes 11 2.03 Yes 0 0 No -23 0.89 Yes 47 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103354115 + NM_145725 TRAF3 1 0.12 0.14 7 5.71 81.56 19 7.07 Yes 6 1.25 Yes 0 0 No -18 0.74 Yes 52 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103354118 + NM_145725 TRAF3 1 0.1 0.13 8 4.57 80.64 22 7.28 Yes 9 1.22 Yes 0 0 No -21 0.91 Yes 49 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103356687 + NM_145725 TRAF3 1 0.21 0.28 18 5.02 78.65 23 5.26 No 69 0.67 No 0 0 No -27 0.73 Yes 43 63.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 103360820 + NM_145725 TRAF3 1 0.36 0.63 29 5.63 91.39 20 5 No 7 0.12 No 0 0 No -23 0.66 No 47 60.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 103361219 + NM_145725 TRAF3 1 0.09 0.13 8 9.25 86.62 21 7.14 Yes 8 1.25 Yes 0 0 No -20 0.87 Yes 50 92.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 103361409 + NM_145725 TRAF3 1 1.16 1.89 62 8.89 95.68 34 4.7 No 54 0.69 No 21 0.29 Yes -21 0.68 Yes 49 79.83 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 103361455 + NM_145725 TRAF3 1 0.27 0.43 28 10.43 83.01 25 5.57 Yes 12 0.46 No 0 0 No -24 0.92 Yes 46 86.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 103361483 + NM_145725 TRAF3 1 0.19 0.33 22 4.87 88.06 20 3.95 No 40 0.43 No 0 0 No -32 0.72 Yes 38 36.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 239247002 + NM_001139490 TRAF3IP1 1 3.73 0.83 34 5.23 90.09 16 5.62 Yes 3 1.11 Yes 26 0.77 Yes -26 0.51 No 44 72.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 239257407 + NM_001139490 TRAF3IP1 1 2.88 0.71 37 1.3 79.73 24 7.12 Yes 11 1.23 Yes 0 0 No -23 0.87 Yes 47 92.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 239257968 + NM_001139490 TRAF3IP1 1 2.55 0.82 38 -1.41 71.1 40 6.2 Yes 68 1.12 Yes 0 0 No -39 0.8 Yes 31 91.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 239261505 + NM_001139490 TRAF3IP1 1 0.92 0.19 12 2.99 72.52 25 6.13 Yes 42 1.04 Yes 0 0 No -24 0.44 No 46 35.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 239268857 + NM_001139490 TRAF3IP1 1 0.56 0.15 10 9 88.27 47 5.17 No 27 0.32 No 0 0 No -31 0.85 Yes 39 88.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 111887761 - NM_147200 TRAF3IP2 1 0.4 0.33 20 0.53 65.62 32 7.81 Yes 19 0.53 No 28 0.52 Yes -32 0.37 No 39 50.43 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 209932381 + NR_109871 TRAF3IP3 1 1.64 1.04 43 5.18 82.46 40 8.24 Yes 27 1.44 Yes 0 0 No -36 0.79 Yes 34 78.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 209933516 + NR_109871 TRAF3IP3 1 0.09 0.11 8 6.56 82.49 16 6.24 Yes 3 1.18 Yes 21 0.67 Yes -28 0.54 No 50 48.04 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 209936263 + NR_109871 TRAF3IP3 1 0.16 0.17 9 8.53 79.89 32 7.07 Yes 19 2.69 Yes 0 0 No -31 0.58 No 39 64.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 209941445 + NR_109871 TRAF3IP3 1 0.14 0.19 11 3.61 73.42 29 6.06 Yes 16 0.95 Yes 0 0 No -24 0.69 Yes 46 74.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 209946298 + NR_109871 TRAF3IP3 1 0.13 0.21 13 -2.41 0 9 3.87 No 14 1.66 Yes 0 0 No -30 0.88 Yes 40 88.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 209946800 + NR_109871 TRAF3IP3 1 0.11 0.24 16 10.27 84.32 22 7.72 Yes 9 1.57 Yes 0 0 No -21 0.64 No 42 59.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 209948634 + NR_109871 TRAF3IP3 1 2.59 5.58 71 7.71 86.91 26 6.24 Yes 50 0.36 No 26 0.71 Yes -25 0.7 Yes 45 72.89 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 209948918 + NR_109871 TRAF3IP3 1 0.61 1.33 50 -8.74 66.38 12 4.06 No NA NA NA 27 0.62 Yes -20 0.75 Yes 56 40.47 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 209948967 + NR_109871 TRAF3IP3 1 0.16 0.35 22 -4.59 0 27 5.59 Yes 14 1.01 Yes 0 0 No -26 0.51 No 19 58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 27071718 + NM_004295 TRAF4 1 0.48 1.15 47 10.11 83.17 21 5.57 Yes 47 2.08 Yes 24 0.67 Yes -20 0.64 No 50 72.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 27074235 + NM_004295 TRAF4 1 1.73 4.46 71 0.26 0 42 6.69 Yes 29 1.49 Yes 36 0.61 Yes -41 0.82 Yes 29 93.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 27074587 + NM_004295 TRAF4 1 0.06 0.19 13 4.28 87.92 23 4.8 No 10 0.2 No 25 0.2 Yes -22 0.85 Yes 48 91.41 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 27074839 + NM_004295 TRAF4 1 0.94 2.83 63 3.98 70.48 19 4.66 No -1 1.34 Yes 22 0.78 Yes -22 0.84 Yes 48 55.31 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 27075009 + NM_004295 TRAF4 1 0.04 0.17 11 8.64 89.63 34 5.91 Yes 21 0.85 Yes 19 0.94 Yes -28 0.83 Yes 42 78.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 27075054 + NM_004295 TRAF4 1 0.24 0.97 42 3.65 76.1 12 5.32 No 27 1.11 Yes 0 0 No -39 0.58 No 31 54.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 27075530 + NM_004295 TRAF4 1 0.05 0.24 14 -4.78 67.2 33 6.93 Yes 20 1.66 Yes 0 0 No -32 0.93 Yes 38 92.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 27075859 + NM_004295 TRAF4 1 0.15 0.51 21 9.03 79.05 25 6.56 Yes 12 2.02 Yes 0 0 No -24 0.9 Yes 46 93.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211533183 + NM_145759 TRAF5 1 0.32 0.17 8 14.13 81.52 25 6.22 Yes 62 0.99 Yes 28 0.89 Yes -27 0.82 Yes 46 76.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 211533220 + NM_145759 TRAF5 1 2.56 0.94 37 1.95 68.34 26 6.08 Yes 13 1.73 Yes 28 0.89 Yes -25 0.72 Yes 45 91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 211533223 + NM_145759 TRAF5 1 1.15 0.51 25 2.78 77.74 29 6.32 Yes 16 1.73 Yes 28 0.89 Yes -28 0.76 Yes 42 87.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 211534433 + NM_145759 TRAF5 1 0.25 0.19 11 0.79 0 21 5.92 Yes 8 1.02 Yes 0 0 No -28 0.86 Yes 42 88.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211539732 + NM_145759 TRAF5 1 0.5 0.28 16 5.17 83.27 24 5.04 No 45 1.16 Yes 0 0 No -23 0.94 Yes 47 94.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 211539752 + NM_145759 TRAF5 1 0.41 0.21 14 4.71 81.07 28 3.83 No 65 1.15 Yes 0 0 No -43 0.68 Yes 43 67.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 211544894 + NM_145759 TRAF5 1 0.23 0.13 7 0.39 62.26 74 9.53 Yes 39 1.54 Yes 0 0 No -29 0.35 No 19 55.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 36518124 - NM_145803 TRAF6 1 2.59 0.78 34 3.41 0 39 5.42 No 45 0.69 No 0 0 No -31 0.64 No 39 75.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 36522164 - NM_145803 TRAF6 1 1.3 0.25 16 10.63 97.46 34 6.16 Yes 21 1.89 Yes 0 0 No -33 0.93 Yes 37 96.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2215852 + NM_032271 TRAF7 1 0.4 0.6 32 -10.21 63.36 45 6.89 Yes 72 -3.09 No 31 0.36 Yes -34 0.51 No 44 59.85 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 2215857 + NM_032271 TRAF7 1 2.12 3.03 64 -1.95 0 50 7.22 Yes 46 -2.31 No 31 0.36 Yes -31 0.46 No 39 56.58 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 2215884 + NM_032271 TRAF7 1 0.09 0.13 9 1.89 0 35 6 Yes 22 0.04 No 0 0 No -34 0.74 Yes 36 62.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 2220615 + NM_032271 TRAF7 1 0.09 0.15 11 -14.92 0 26 5.48 No 33 0.8 Yes 0 0 No -23 0.66 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2222193 + NM_032271 TRAF7 1 0.16 0.18 11 -1.45 72.85 29 4.97 No 57 1.23 Yes 0 0 No -22 0.83 Yes 48 69.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2222196 + NM_032271 TRAF7 1 0.07 0.1 7 -2.44 0 32 5.22 No 60 1.23 Yes 0 0 No -25 0.83 Yes 45 66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2222519 + NM_032271 TRAF7 1 0.12 0.24 14 3.63 67.56 35 6 Yes 71 0.79 Yes 0 0 No -29 0.67 Yes 36 53.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2225488 + NM_032271 TRAF7 1 0.1 0.18 13 -2.63 0 11 3.77 No 22 0.95 Yes 22 0.59 Yes -34 0.64 No 32 76.17 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 112577922 + NM_001143906 TRAFD1 1 0.76 1.1 43 9.69 82.64 29 5.39 No 16 0.72 No 28 0.68 Yes -28 0.77 Yes 42 72.74 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 112583395 + NM_001143906 TRAFD1 1 0.48 0.63 31 -2.97 0 15 3.87 No 21 1 Yes 0 0 No -27 0.37 No 43 59.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112585924 + NM_001143906 TRAFD1 1 0.07 0.17 10 4.79 73.64 38 6.56 Yes 70 1.66 Yes 0 0 No -30 0.46 No 32 49.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 112585982 + NM_001143906 TRAFD1 1 0.17 0.36 20 3.73 86.91 25 4.9 No 17 1.2 Yes 0 0 No -24 0.91 Yes 46 90.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49866566 - NM_005879 TRAIP 1 0.32 0.1 7 10.41 95.19 25 5.1 No 66 0.61 No 0 0 No -21 0.41 No 49 52.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 49870474 - NM_005879 TRAIP 1 1.27 0.43 23 10.37 93.07 15 5.29 No -4 0.15 No 0 0 No -21 0.74 Yes 49 85.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49879978 - NM_005879 TRAIP 1 0.78 0.24 12 -0.37 73.91 29 5.76 Yes 46 -3.6 No 0 0 No -31 0.82 Yes 39 69.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49881451 - NM_005879 TRAIP 1 4.74 1.83 57 3.89 74.24 25 5.55 No 12 1.33 Yes 24 0.94 Yes -24 0.83 Yes 46 85.64 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 49881737 - NM_005879 TRAIP 1 0.39 0.15 9 1.1 0 20 4.58 No 45 0.94 Yes 0 0 No -19 0.88 Yes 51 86.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49884994 - NM_005879 TRAIP 1 0.97 0.35 17 7.35 87.12 24 5.05 No 55 1.33 Yes 27 0.59 Yes -27 0.64 No 43 67.08 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 42223387 + NM_014965 TRAK1 1 0.12 0.13 9 10.61 85.73 29 5.48 No 16 1.32 Yes 0 0 No -28 0.97 Yes 42 98.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 42228980 + NM_014965 TRAK1 1 0.33 0.14 10 4.61 83.28 23 5.87 Yes 34 0.51 No 0 0 No -25 0.72 Yes 45 67.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 202246989 - NM_015049 TRAK2 1 1.05 0.74 33 7.6 96.48 16 6.02 Yes 3 1.38 Yes 0 0 No -25 0.49 No 41 45.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 202254135 - NM_015049 TRAK2 1 0.52 0.39 21 6.51 87.73 27 5.2 No 36 1.18 Yes 0 0 No -26 0.96 Yes 44 95.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 202255898 - NM_015049 TRAK2 1 0.3 0.21 15 6.74 88.1 22 5.74 Yes 9 1.44 Yes 0 0 No -21 0.52 No 49 56.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 202265812 - NM_015049 TRAK2 1 0.67 0.42 24 1.35 0 14 3.38 No 64 0.62 No 0 0 No -31 0.49 No 39 57.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 202270704 - NM_015049 TRAK2 1 0.19 0.11 7 3.86 83.28 31 6.08 Yes 18 0.86 Yes 0 0 No -30 0.8 Yes 40 72.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 202276871 - NM_015049 TRAK2 1 0.15 0.11 8 6.7 88.59 26 6.99 Yes 13 1.69 Yes 0 0 No -25 0.84 Yes 45 85.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 71495493 - NM_001317804 TRAM1 1 0.03 0.18 13 3.05 84.49 25 4.87 No -4 0.78 Yes 0 0 No -27 0.67 Yes 46 70.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 71495937 - NM_001317804 TRAM1 1 0.03 0.15 11 -2.03 0 29 6.48 Yes 37 1.78 Yes 0 0 No -28 0.9 Yes 42 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 71495970 - NM_001317804 TRAM1 1 0.03 0.13 7 6.85 90.13 17 5.66 Yes 4 1.83 Yes 0 0 No -16 0.61 No 54 85.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 71507312 - NM_001317804 TRAM1 1 0.1 0.57 29 9.09 81.88 51 6.71 Yes 48 2.27 Yes 0 0 No -29 0.79 Yes 41 87.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 71510245 - NM_001317804 TRAM1 1 0.03 0.21 12 -8.42 0 23 8.32 Yes 10 1.53 Yes 0 0 No -22 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 71510246 - NM_001317804 TRAM1 1 0.03 0.17 10 -9.24 0 22 8.27 Yes 9 1.52 Yes 0 0 No -21 0.55 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 71510443 - NM_001317804 TRAM1 1 0.05 0.19 9 1.49 66.66 34 6 Yes 21 0.91 Yes 0 0 No -33 0.69 Yes 37 77.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 71510488 - NM_001317804 TRAM1 1 1.94 8.18 72 2.36 72.98 78 6.66 Yes 36 1.05 Yes 0 0 No -48 0.46 No 22 75.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 71519215 - NM_001317804 TRAM1 1 0.16 0.64 35 4.16 86.63 19 4.69 No 31 -1.1 No 0 0 No -18 0.66 No 52 60.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 52369486 - NM_012288 TRAM2 1 1.14 0.6 30 5.01 82.16 25 6.46 Yes 71 2.4 Yes 0 0 No -24 0.97 Yes 46 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52370951 - NM_012288 TRAM2 1 0.21 0.17 10 -8.27 0 25 3.5 No 45 0.27 No 23 0.86 Yes -46 0.33 No 24 35.63 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 52373110 - NM_012288 TRAM2 1 0.58 0.42 24 5.21 0 10 4 No 15 1.36 Yes 0 0 No -27 0.91 Yes 43 91.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 52382075 - NM_012288 TRAM2 1 0.17 0.13 7 11.67 88.9 33 5.66 Yes 60 1.19 Yes 0 0 No -29 0.65 No 41 78.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 52384606 - NM_012288 TRAM2 1 2.91 1.99 57 9.77 89.4 26 5.66 Yes 49 0.89 Yes 0 0 No -25 0.76 Yes 45 77.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 36891855 - NM_001329998 TRANK1 1 1.05 0.33 19 9.2 77.48 31 6.59 Yes 18 1.53 Yes 0 0 No -30 0.79 Yes 40 83.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 36892909 - NM_001329998 TRANK1 1 0.67 0.18 10 7.9 90.46 29 5.64 Yes 16 0.45 No 0 0 No -28 0.96 Yes 42 94.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 36901292 - NM_001329998 TRANK1 1 0.34 0.1 7 2.25 67.41 36 4.92 No 36 0.46 No 0 0 No -36 0.65 No 34 93.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 36914416 - NM_001329998 TRANK1 1 0.34 0.11 8 10.46 83.82 29 5.43 No 16 1.5 Yes 0 0 No -28 0.92 Yes 42 93.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 36921925 - NM_001329998 TRANK1 1 1.16 0.29 15 5.11 86.18 22 4.38 No 50 0.18 No 0 0 No -19 0.58 No 49 63.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 36929502 - NM_001329998 TRANK1 1 0.97 0.29 11 7.54 88.53 12 5.74 Yes 38 0.37 No 0 0 No -26 0.59 No 44 81.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 36931449 - NM_001329998 TRANK1 1 1.13 0.5 24 -10.89 73.29 25 4.35 No 39 1.83 Yes 0 0 No -24 0.67 Yes 45 56.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 3708230 - NM_001272049 TRAP1 1 0.12 0.33 17 -9.5 0 28 5.82 Yes 15 0.77 Yes 0 0 No -30 0.72 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 3713543 - NM_001272049 TRAP1 1 0.17 0.56 31 5.28 80.05 30 5.48 No 74 1.39 Yes 0 0 No -23 0.53 No 47 66.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 3714458 - NM_001272049 TRAP1 1 0.11 0.31 17 -6.44 77.05 24 5.97 Yes 11 1.87 Yes 0 0 No -23 0.88 Yes 47 85.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3715316 - NM_001272049 TRAP1 1 0.06 0.18 11 1.96 86.95 23 4.9 No 10 1.24 Yes 0 0 No -23 0.88 Yes 48 77.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3724599 - NM_001272049 TRAP1 1 0.14 0.64 29 8.33 85.96 24 5.47 No 11 0.88 Yes 23 0.9 Yes -23 0.8 Yes 47 71.55 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 3724907 - NM_001272049 TRAP1 1 0.48 2.14 52 8.64 81.93 38 6.89 Yes 76 0.31 No 19 0.42 Yes -37 0.52 No 33 69.4 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 3728999 - NM_001272049 TRAP1 1 0.03 0.11 7 2.92 72.85 23 5.1 No 10 0.32 No 0 0 No -22 0.93 Yes 48 93.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 3729307 - NM_001272049 TRAP1 1 0.41 1.42 56 -1.88 80.18 30 6.01 Yes 49 0.18 No 0 0 No -29 0.74 Yes 41 76.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7834464 - NR_030697 TRAPPC1 1 1.23 0.14 8 -1.99 0 26 7.28 Yes 13 1.26 Yes 0 0 No -25 0.74 Yes 45 74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7834895 - NR_030697 TRAPPC1 1 5473.75 546.5 72 13.26 90.43 22 5.74 Yes 9 1.99 Yes 21 0.94 Yes -21 0.91 Yes 49 93.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 7834895 - NR_030697 TRAPPC1 1 1.77 0.15 10 13.26 90.43 22 5.74 Yes 9 1.99 Yes 21 0.94 Yes -21 0.91 Yes 49 93.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 45452639 + NM_003274 TRAPPC10 1 0.84 0.78 37 6.17 83.07 18 4.66 No -2 1.21 Yes 0 0 No -22 0.81 Yes 48 59.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45452670 + NM_003274 TRAPPC10 1 0.43 0.42 20 2.35 73.6 27 6.29 Yes 29 1.22 Yes 0 0 No -26 0.53 No 37 49.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 45452682 + NM_003274 TRAPPC10 1 0.64 0.63 30 0.14 0 18 4.58 No 41 1.21 Yes 0 0 No -17 0.82 Yes 53 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45453144 + NM_003274 TRAPPC10 1 0.22 0.18 9 5.64 81.01 28 5.56 Yes 21 1.31 Yes 0 0 No -27 0.95 Yes 43 95.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45458056 + NM_003274 TRAPPC10 1 5.22 9.43 72 9.29 80.14 38 6.86 Yes 25 0.72 No 0 0 No -24 0.49 No 46 63.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45472142 + NM_003274 TRAPPC10 1 0.26 0.47 23 3.82 81.57 15 5.1 No 2 1.35 Yes 22 0.89 Yes -28 0.41 No 42 36.77 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 45475691 + NM_003274 TRAPPC10 1 0.06 0.11 7 3.82 59.97 38 6.5 Yes 34 1.25 Yes 0 0 No -37 0.71 Yes 33 79.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45475180 + NM_003274 TRAPPC10 1 0.09 0.17 10 6.26 78.43 45 7.09 Yes 32 2.4 Yes 0 0 No -32 0.87 Yes 38 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45475656 + NM_003274 TRAPPC10 1 0.11 0.21 11 4.29 72.14 35 6.4 Yes -1 0.99 Yes 0 0 No -34 0.76 Yes 59 39.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45475691 + NM_003274 TRAPPC10 1 2.19 4.03 69 3.82 59.97 38 6.5 Yes 34 1.25 Yes 0 0 No -37 0.71 Yes 33 79.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45479345 + NM_003274 TRAPPC10 1 41.88 25.6 72 7.26 83.55 29 4.13 No 41 -3.93 No 25 0.49 Yes -25 0.34 No 45 44.16 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr21 45482911 + NM_003274 TRAPPC10 1 0.26 0.17 9 1.71 63.03 32 6.48 Yes 19 1.27 Yes 28 0.61 Yes -31 0.75 Yes 39 74.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 45482933 + NM_003274 TRAPPC10 1 1.32 0.85 38 12.95 90.62 25 5.45 No 41 1.26 Yes 28 0.61 Yes -28 0.37 No 42 58.54 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 45483450 + NM_003274 TRAPPC10 1 0.3 0.19 13 4.64 91.22 16 6.4 Yes 3 1.81 Yes 0 0 No -24 0.68 Yes 47 79.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45483454 + NM_003274 TRAPPC10 1 0.53 0.31 18 1.41 0 20 6.7 Yes 7 1.78 Yes 0 0 No -28 0.69 Yes 43 72.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45483493 + NM_003274 TRAPPC10 1 0.29 0.15 9 3.67 59.48 38 5.78 Yes 46 1.73 Yes 0 0 No -19 0.66 Yes 47 22.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 45496329 + NM_003274 TRAPPC10 1 0.28 0.26 15 1.14 69.47 46 6.16 Yes 73 0.77 Yes 0 0 No -42 0.6 No 45 63.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 45496355 + NM_003274 TRAPPC10 1 0.44 0.44 24 4.49 85.19 18 4.41 No 0 0.05 No 0 0 No -22 0.81 Yes 48 62.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 45498678 + NM_003274 TRAPPC10 1 2.87 3.46 68 5.09 84.88 30 4.25 No 3 0.55 No 0 0 No -29 0.59 No 41 56.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45504468 + NM_003274 TRAPPC10 1 1.76 1.36 51 1.55 70.49 47 7.21 Yes 34 0.36 No 0 0 No -46 0.66 Yes 47 78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 45506686 + NM_003274 TRAPPC10 1 0.94 0.71 36 1.87 0 28 5.83 Yes 15 1.13 Yes 0 0 No -27 0.78 Yes 43 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45507584 + NM_003274 TRAPPC10 1 4.14 2.88 68 1.03 0 26 5.94 Yes 13 1.16 Yes 0 0 No -25 0.59 No 45 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 45507702 + NM_003274 TRAPPC10 1 2.55 1.74 55 8.2 88.51 28 5.2 No -4 0.21 No 0 0 No -27 0.77 Yes 43 58.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 45513954 + NM_003274 TRAPPC10 1 0.1 0.11 7 2.71 0 14 4.47 No 19 1.96 Yes 0 0 No -31 0.61 No 39 85.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 45513954 + NM_003274 TRAPPC10 1 0.16 0.17 8 2.71 0 14 4.47 No 19 1.96 Yes 0 0 No -31 0.61 No 39 85.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 45514418 + NM_003274 TRAPPC10 1 0.22 0.24 14 5.07 67.97 49 6.99 Yes 65 0.5 No 0 0 No -29 0.45 No 41 52.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 45514488 + NM_003274 TRAPPC10 1 0.1 0.1 7 0.88 0 15 4.58 No 56 0.78 Yes 0 0 No -14 0.38 No 56 39.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 45516485 + NM_003274 TRAPPC10 1 4 3.81 70 11.51 94.69 22 7.12 Yes 41 0.91 Yes 24 0.81 Yes -24 0.69 Yes 46 84.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 45518977 + NM_003274 TRAPPC10 1 0.65 0.5 27 3.76 86.17 21 4.8 No 8 1.08 Yes 0 0 No -20 0.86 Yes 50 82.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 45523177 + NM_003274 TRAPPC10 1 0.8 0.65 29 3.78 0 25 6.56 Yes 12 1.79 Yes 0 0 No -24 0.94 Yes 46 91.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 184581256 + NM_199053 TRAPPC11 1 4.23 1.28 43 7.07 90.6 18 7.35 Yes 5 0.53 No 0 0 No -29 0.77 Yes 41 72.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 184587378 + NM_199053 TRAPPC11 1 0.98 0.53 31 8.23 90.41 25 5.38 No 12 1.02 Yes 24 0.92 Yes -24 0.78 Yes 46 86.38 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 184601360 + NM_199053 TRAPPC11 1 3.56 2.25 60 5.03 84.9 24 4.42 No 11 0.09 No 23 0.89 Yes -23 0.68 Yes 47 74.28 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 184601363 + NM_199053 TRAPPC11 1 0.4 0.29 19 5.61 87.74 27 4.64 No 14 0.08 No 0 0 No -26 0.78 Yes 44 78.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 184605922 + NM_199053 TRAPPC11 1 0.17 0.15 7 6.3 80.72 20 6.08 Yes 7 0 No 0 0 No -19 0.72 Yes 51 71.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 184607775 + NM_199053 TRAPPC11 1 0.33 0.32 19 3.66 0 32 5.83 Yes 19 1 Yes 0 0 No -31 0.54 No 39 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 184614835 + NM_199053 TRAPPC11 1 0.4 0.38 22 3.76 79.13 37 7.8 Yes 24 0.87 Yes 0 0 No -32 0.69 Yes 38 81.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 184620789 + NM_199053 TRAPPC11 1 0.56 0.32 19 1.42 64.35 24 5.1 No 55 -3.55 No 0 0 No -23 0.92 Yes 47 86.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 184622921 + NM_199053 TRAPPC11 1 0.31 0.19 11 3.15 64.46 43 7.28 Yes 30 0.55 No 0 0 No -27 0.84 Yes 24 65.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 184627878 + NM_199053 TRAPPC11 1 1.02 0.9 42 5.36 82.51 34 6.55 Yes 70 0.17 No 0 0 No -24 0.63 No 42 61.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 184627939 + NM_199053 TRAPPC11 1 0.5 0.46 25 -8.32 0 32 5.57 Yes 69 -2.66 No 0 0 No -32 0.46 No 58 46.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 184633258 + NM_199053 TRAPPC11 1 0.94 0.65 35 7.16 95.29 26 5.2 No 13 0.34 No 0 0 No -25 0.9 Yes 45 92.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 184633758 + NM_199053 TRAPPC11 1 0.21 0.17 9 0.23 0 10 2.97 No 22 1.01 Yes 0 0 No -43 0.37 No 36 36.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 3392953 + NM_001321102 TRAPPC12 1 1.77 1.17 45 -1.58 72.5 21 4.67 No 35 0.37 No 0 0 No -20 0.6 No 23 54.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 3409704 + NM_001321102 TRAPPC12 1 0.2 0.14 8 5.98 80.43 46 7.14 Yes 46 1.55 Yes 0 0 No -24 0.86 Yes 46 82.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 3425470 + NM_001321102 TRAPPC12 1 2.12 1.53 46 4.62 73.06 113 8.2 Yes 24 1.54 Yes 21 0.68 Yes -36 0.91 Yes 34 97.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 3451931 + NM_001321102 TRAPPC12 1 0.37 0.18 12 8.98 84.4 24 5.83 Yes 44 0.73 No 0 0 No -28 0.79 Yes 42 68.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 3452957 + NM_001321102 TRAPPC12 1 0.99 0.5 21 7.75 81.7 28 7.12 Yes 15 2.34 Yes 36 0.65 Yes -27 0.9 Yes 43 87.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 3456731 + NM_001321102 TRAPPC12 1 3.6 1.86 59 4.7 76.59 28 5.38 No 65 0.48 No 0 0 No -27 0.96 Yes 43 96.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 3460717 + NM_001321102 TRAPPC12 1 1.49 0.81 36 7.01 81.86 45 7.07 Yes 32 1.06 Yes 0 0 No -33 0.85 Yes 37 68.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 3460920 + NM_001321102 TRAPPC12 1 0.5 0.29 16 5.26 84.69 30 5.39 No 62 -4.53 No 29 0.4 Yes -29 0.37 No 41 34.76 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 3461565 + NM_001321102 TRAPPC12 1 0.91 0.53 31 8.43 82.39 47 6.77 Yes 42 1.46 Yes 27 0.75 Yes -27 0.79 Yes 31 37.03 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 3464015 + NM_001321102 TRAPPC12 1 0.3 0.21 14 7.52 90.24 17 4.76 No 63 -4.46 No 22 0.96 Yes -28 0.49 No 42 45.63 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 3464414 + NM_001321102 TRAPPC12 1 2.45 1.64 58 7.21 78 48 4.13 No 2 1.27 Yes 38 0.72 Yes -35 0.61 No 35 66.78 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 3464417 + NM_001321102 TRAPPC12 1 0.71 0.47 25 0.94 76.03 51 4.25 No 5 1.26 Yes 38 0.72 Yes -38 0.57 No 16 67.39 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 3466628 + NM_001321102 TRAPPC12 1 0.25 0.18 11 10.98 80.72 25 6 Yes 55 -1.03 No 24 0.32 Yes -20 0.61 No 46 39.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 3468212 + NM_001321102 TRAPPC12 1 0.15 0.11 8 1.91 59.37 47 9.42 Yes 1 0.12 No 0 0 No -34 0.61 No 36 55.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 3470024 + NM_001321102 TRAPPC12 1 0.97 0.63 31 8.39 88.21 41 6.58 Yes 28 0.63 No 27 0.58 Yes -25 0.64 No 45 73.25 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 3471200 + NM_001321102 TRAPPC12 1 0.48 0.33 18 7.72 86.6 35 4.76 No 44 1.36 Yes 18 0.43 Yes -18 0.45 No 42 46.42 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 3481462 + NM_001321102 TRAPPC12 1 1.31 0.92 40 0.63 67.91 42 7.03 Yes 5 1.05 Yes 22 0.72 Yes -22 0.45 No 48 51.94 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 64921887 + NM_001093755 TRAPPC13 1 0.12 0.1 7 3.74 73.32 25 5.78 Yes 39 1.05 Yes 0 0 No -24 0.97 Yes 46 96.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 64924307 + NM_001093755 TRAPPC13 1 0.29 0.22 14 3.19 84.41 21 9.27 Yes 61 0.45 No 0 0 No -23 0.42 No 45 45.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 64925294 + NM_001093755 TRAPPC13 1 31.35 24.07 72 7.33 85.65 26 7.16 Yes 13 0.08 No 25 0.83 Yes -25 0.9 Yes 45 88.73 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 64928166 + NM_001093755 TRAPPC13 1 0.29 0.24 13 12.27 96.39 32 5.6 Yes 76 -2.35 No 0 0 No -25 0.65 No 45 80.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 64954076 + NM_001093755 TRAPPC13 1 0.48 0.17 10 6.14 91.62 45 7.01 Yes 68 1.5 Yes 0 0 No -23 0.85 Yes 47 91.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 64954221 + NM_001093755 TRAPPC13 1 0.88 0.33 15 -6.97 0 24 5.08 No 11 1 Yes 0 0 No -23 0.87 Yes 47 65.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 64957040 + NM_001093755 TRAPPC13 1 0.31 0.18 12 2.95 61.95 41 7.17 Yes 18 1.82 Yes 0 0 No -30 0.9 Yes 40 76.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 64960063 + NM_001093755 TRAPPC13 1 124.99 34.47 72 4.08 79.59 39 6.07 Yes 1 0.26 No 25 0.76 Yes -28 0.88 Yes 42 92.8 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 13738617 - NM_014563 TRAPPC2 1 6.13 2.6 61 11.68 87.36 23 5 No 10 0.79 Yes 22 0.83 Yes -22 0.7 Yes 52 78.22 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 13752305 - NM_014563 TRAPPC2 1 51 21.71 72 6.04 85.75 30 6 Yes 17 -0.55 No 29 0.89 Yes -29 0.87 Yes 41 85.42 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 88923898 + NM_001318524 TRAPPC2L 1 0.08 0.1 7 7.82 87.41 25 6.39 Yes NA NA NA 0 0 No -23 0.75 Yes 46 61.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 88925049 + NM_001318524 TRAPPC2L 1 1.04 1.32 52 7.05 82.93 20 5.66 Yes 7 0.98 Yes 19 0.57 Yes -25 0.55 No 45 49.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 36602918 - NM_001270895 TRAPPC3 1 0.21 0.42 21 1.03 0 9 3.87 No 67 0.33 No 0 0 No -33 0.73 Yes 36 73.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 36603834 - NM_001270895 TRAPPC3 1 0.08 0.17 9 4.03 72.1 33 4.24 No 20 0.37 No 28 0.76 Yes -28 0.54 No 42 68.54 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 36605445 - NM_001270895 TRAPPC3 1 4.22 6.72 72 0.27 0 15 4.58 No 60 0.11 No 28 0.63 Yes -18 0.44 No 52 25.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 45667523 - NM_024108 TRAPPC6A 1 0.12 0.14 7 2.61 71.7 15 4.83 No 34 1.44 Yes 22 0.88 Yes -46 0.69 Yes 24 48.11 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 45667543 - NM_024108 TRAPPC6A 1 0.79 1 40 5.03 81.79 45 5.39 No 14 1.43 Yes 22 0.88 Yes -26 0.72 Yes 44 87.33 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 39618775 - NM_177452 TRAPPC6B 1 0.84 0.61 29 13 89.58 31 6.7 Yes 18 1.97 Yes 0 0 No -30 0.91 Yes 40 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39618991 - NM_177452 TRAPPC6B 1 0.23 0.17 10 9.51 90.72 33 8.52 Yes 20 0.82 Yes 0 0 No -24 0.71 Yes 46 77.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39623499 - NM_177452 TRAPPC6B 1 424.31 82.15 72 8.47 87.09 32 6.93 Yes 19 1.15 Yes 31 0.77 Yes -35 0.63 No 39 77.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 39623499 - NM_177452 TRAPPC6B 1 2.61 0.51 23 8.47 87.09 32 6.93 Yes 19 1.15 Yes 31 0.77 Yes -35 0.63 No 39 77.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 39623499 - NM_177452 TRAPPC6B 1 0.44 0.1 7 8.47 87.09 32 6.93 Yes 19 1.15 Yes 31 0.77 Yes -35 0.63 No 39 77.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 39632566 - NM_177452 TRAPPC6B 1 1.5 0.79 37 0.74 67.84 43 8.15 Yes 30 2.15 Yes 0 0 No -42 0.73 Yes 28 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39637251 - NM_177452 TRAPPC6B 1 0.28 0.14 8 4.02 80.12 26 6.61 Yes 13 1.76 Yes 0 0 No -25 0.66 Yes 45 87.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39637254 - NM_177452 TRAPPC6B 1 1.65 0.88 40 5.12 85.02 23 6.41 Yes 10 1.79 Yes 0 0 No -22 0.78 Yes 48 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 39637418 - NM_177452 TRAPPC6B 1 0.91 0.43 20 11.93 88.27 41 8.63 Yes 28 2.02 Yes 0 0 No -40 0.92 Yes 30 97.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29410834 - NM_014939 TRAPPC8 1 0.26 0.26 15 7.79 95.56 23 5.2 No 10 0.44 No 0 0 No -22 0.74 Yes 43 58.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 29410834 - NM_014939 TRAPPC8 1 0.11 0.13 8 7.79 95.56 23 5.2 No 10 0.44 No 0 0 No -22 0.74 Yes 43 58.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 29410948 - NM_014939 TRAPPC8 1 0.56 0.56 29 2.01 0 26 7.21 Yes 13 0.79 Yes 20 0.83 Yes -25 0.74 Yes 45 90.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 29410948 - NM_014939 TRAPPC8 1 0.11 0.1 7 2.01 0 26 7.21 Yes 13 0.79 Yes 20 0.83 Yes -25 0.74 Yes 45 90.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 29417072 - NM_014939 TRAPPC8 1 1.16 1.25 47 10.3 89.4 27 6.32 Yes 14 1.61 Yes 0 0 No -26 0.97 Yes 44 97.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29432490 - NM_014939 TRAPPC8 1 1.21 1.04 47 0.17 54.9 39 8.08 Yes 26 0.95 Yes 27 0.6 Yes -38 0.65 No 32 74.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr18 29437684 - NM_014939 TRAPPC8 1 0.41 0.38 21 4.7 0 18 4.51 No 10 0.98 Yes 22 0.69 Yes -22 0.78 Yes 48 79.12 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 29437921 - NM_014939 TRAPPC8 1 0.31 0.31 18 9.56 93.91 32 4.31 No 35 0.81 Yes 0 0 No -27 0.45 No 43 55.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 29446908 - NM_014939 TRAPPC8 1 0.31 0.25 12 6.89 76.43 23 5.29 No 37 1.28 Yes 0 0 No -22 0.76 Yes 48 77.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29454904 - NM_014939 TRAPPC8 1 0.35 0.31 19 13.41 90.57 33 5.75 Yes 26 0.21 No 0 0 No -32 0.5 No 43 74.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 29467607 - NM_014939 TRAPPC8 1 0.15 0.13 7 4.74 84.41 26 7.62 Yes 13 1.12 Yes 0 0 No -25 0.86 Yes 45 90.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29485491 - NM_014939 TRAPPC8 1 0.22 0.15 11 3.91 86.44 13 4.48 No 0 0.38 No 0 0 No -20 0.39 No 41 66.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 29488977 - NM_014939 TRAPPC8 1 8.93 11.33 72 4.11 86.38 14 4.24 No 1 0.8 Yes 25 0.84 Yes -22 0.61 No 48 50.11 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 29501579 - NM_014939 TRAPPC8 1 0.46 0.44 29 3.97 84.41 25 5.98 Yes 12 1.1 Yes 0 0 No -24 0.62 No 39 70.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 29503119 - NM_014939 TRAPPC8 1 0.17 0.17 9 9.46 89.58 66 8.85 Yes 53 2.29 Yes 0 0 No -29 0.52 No 44 68.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 29508486 - NM_014939 TRAPPC8 1 0.14 0.13 7 8.92 83.29 38 7.44 Yes 25 0.72 No 0 0 No -31 0.85 Yes 39 78.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 29511850 - NM_014939 TRAPPC8 1 0.3 0.18 13 8.19 81.97 34 7.34 Yes 21 1.71 Yes 0 0 No -33 0.93 Yes 37 92.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 29516420 - NM_014939 TRAPPC8 1 1.46 0.85 44 3.88 0 55 5.2 No 2 0.52 No 0 0 No -28 0.9 Yes 42 81.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 140743466 - NM_001160372 TRAPPC9 1 1.55 0.38 17 0.16 0 9 3.87 No 19 1.88 Yes 0 0 No -31 0.65 No 39 82.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 140818449 - NM_001160372 TRAPPC9 1 0.84 0.14 10 8.92 92.21 28 5.74 Yes 35 0.01 No 0 0 No -24 0.5 No 42 62.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 140897922 - NM_001160372 TRAPPC9 1 0.83 0.11 8 6.54 85.51 22 4.42 No 36 0.57 No 0 0 No -21 0.68 Yes 49 74.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 141280579 - NM_001160372 TRAPPC9 1 1.03 0.46 19 11.34 96.88 26 6 Yes 13 1.43 Yes 0 0 No -25 0.85 Yes 45 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 141358046 - NM_001160372 TRAPPC9 1 14 6.25 72 9.21 86.68 28 5.88 Yes 48 0.68 No 0 0 No -20 0.49 No 46 51.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 141378470 - NM_001160372 TRAPPC9 1 0.23 0.11 8 8.88 85.65 29 5.25 No 3 0.48 No 0 0 No -25 0.47 No 42 50.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 141378568 - NM_001160372 TRAPPC9 1 2.65 1.14 44 8.77 86.68 33 5.16 No 20 0.1 No 0 0 No -31 0.33 No 39 48.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 141378980 - NM_001160372 TRAPPC9 1 0.77 0.36 22 9.37 87.72 24 4.78 No 23 0.42 No 0 0 No -23 0.62 No 47 72.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 141395945 - NM_001160372 TRAPPC9 1 0.29 0.15 9 8.85 88.97 32 7.25 Yes 19 1.13 Yes 0 0 No -31 0.87 Yes 39 84.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 141419717 - NM_001160372 TRAPPC9 1 2.64 0.92 46 8.11 81.06 30 5.66 Yes 2 1.11 Yes 0 0 No -29 0.93 Yes 41 96.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 141419717 - NM_001160372 TRAPPC9 1 0.95 0.35 23 8.11 81.06 30 5.66 Yes 2 1.11 Yes 0 0 No -29 0.93 Yes 41 96.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 141442081 - NM_001160372 TRAPPC9 1 0.78 0.26 16 7.21 85.78 22 5.53 No 60 -4.29 No 0 0 No -25 0.68 Yes 45 76.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 141466971 - NM_001160372 TRAPPC9 1 1.2 0.18 12 3.98 85.64 23 4.8 No 10 1.35 Yes 0 0 No -22 0.91 Yes 48 94.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 17181201 - NM_001321006 TRDMT1 1 2.8 0.43 21 12.51 89.53 17 5.22 No 49 0.82 Yes 0 0 No -23 0.39 No 54 51.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 17194099 - NM_001321006 TRDMT1 1 4.71 0.64 32 13.04 93.33 25 5.82 Yes 35 1.64 Yes 28 0.77 Yes -28 0.7 Yes 42 70.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 41164074 - NM_024807 TREML2 1 0.99 0.13 9 9.75 88.98 28 8.33 Yes 15 1.46 Yes 0 0 No -27 0.72 Yes 43 89.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 120882755 - NM_016399 TRIAP1 1 0.07 0.36 20 -2.67 0 27 6.19 Yes 14 0.94 Yes 0 0 No -41 0.64 No 41 64.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 120882790 - NM_016399 TRIAP1 1 0.06 0.29 15 -1.13 0 14 3.53 No 47 0.44 No 25 0.8 Yes -18 0.35 No 52 25.48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 376845 + NM_021158 TRIB3 1 0.28 0.11 8 -4.27 0 32 6.78 Yes 19 2.14 Yes 0 0 No -31 0.82 Yes 39 89.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 228588893 - NM_145214 TRIM11 1 7.41 1.82 57 -2.24 59.1 31 6.08 Yes 18 1.06 Yes 27 0.94 Yes -30 0.93 Yes 40 93.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 50575130 + NM_213590 TRIM13 1 0.95 0.69 30 7.73 75.76 43 6.67 Yes 36 1.29 Yes 42 0.63 Yes -42 0.49 No 28 47.28 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 100852765 - NM_033219 TRIM14 1 1.35 0.99 46 7.31 76.32 32 5.86 Yes -1 0.61 No 0 0 No -31 0.52 No 49 38.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 100856914 - NM_033219 TRIM14 1 0.14 0.15 10 9.75 85.69 26 6 Yes 64 1.92 Yes 0 0 No -25 0.73 Yes 45 88.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100862259 - NM_033219 TRIM14 1 0.35 0.21 14 8.39 85.25 26 6.26 Yes 62 -3.94 No 25 0.74 Yes -25 0.67 Yes 45 67.74 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 15584537 - NM_006470 TRIM16 1 2.79 0.57 24 11.82 91.42 27 7.14 Yes 14 1.14 Yes 26 0.85 Yes -27 0.53 No 43 59.79 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 18627082 + NM_001037330 TRIM16L 1 6.45 0.32 19 5.95 85.53 46 7.04 Yes 3 0.46 No 24 0.8 Yes -24 0.67 Yes 46 82.59 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 4406413 - NM_003141 TRIM21 1 0.19 0.17 7 9.23 92.08 21 7.05 Yes 8 1.39 Yes 0 0 No -20 0.4 No 50 53.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 4406625 - NM_003141 TRIM21 1 0.21 0.22 13 9.71 89.42 46 9.19 Yes 33 2.04 Yes 31 0.89 Yes -31 0.58 No 25 51.13 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 4407141 - NM_003141 TRIM21 1 1.21 1.31 44 5.38 83.53 35 4.56 No 28 1.54 Yes 0 0 No -22 0.67 Yes 48 88.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 4407485 - NM_003141 TRIM21 1 0.19 0.22 13 -20.17 72.62 22 5.83 Yes 9 0.82 Yes 0 0 No -21 0.91 Yes 49 90.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 5717346 + NM_006074 TRIM22 1 0.09 0.58 26 -1.87 70.09 71 7.82 Yes 23 1.2 Yes 0 0 No -35 0.79 Yes 35 77.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 5717404 + NM_006074 TRIM22 1 0.68 4.89 68 -0.22 0 11 4.12 No 21 1.28 Yes 0 0 No -33 0.93 Yes 37 70.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 5719556 + NM_006074 TRIM22 1 0.18 0.96 41 0.79 0 22 4.58 No 28 2.29 Yes 0 0 No -40 0.93 Yes 30 95.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 5721838 + NM_006074 TRIM22 1 0.02 0.14 10 12.99 95.65 34 5.92 Yes 71 1.32 Yes 0 0 No -31 0.76 Yes 39 90.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 64907535 - NM_001656 TRIM23 1 3.45 0.68 28 2.21 81.32 24 5.12 No 74 0.51 No 0 0 No -23 0.94 Yes 47 96.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 64909683 - NM_001656 TRIM23 1 1.75 0.28 17 6.14 77.99 46 8.13 Yes 33 1.01 Yes 27 0.8 Yes -34 0.73 Yes 36 77.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 138147505 + NM_003852 TRIM24 1 0.31 0.13 8 -1.81 0 15 4.58 No 41 1.82 Yes 0 0 No -53 0.48 No 17 59.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 138180377 + NM_003852 TRIM24 1 5.09 2.18 62 10.27 92 25 6.21 Yes 59 0.04 No 0 0 No -24 0.87 Yes 46 91.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 138201582 + NM_003852 TRIM24 1 0.19 0.13 9 1.49 0 36 6.33 Yes 70 0.39 No 0 0 No -36 0.65 No 34 49.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 138205630 + NM_003852 TRIM24 1 0.67 0.53 28 1.79 70.64 19 5.41 No 6 0.06 No 0 0 No -26 0.64 No 44 57.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 138223403 + NM_003852 TRIM24 1 0.09 0.11 7 -0.03 78.35 30 7.31 Yes 68 1.14 Yes 0 0 No -29 0.71 Yes 41 93.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 138262179 + NM_003852 TRIM24 1 0.86 0.71 37 6.17 86.12 20 4.9 No 43 0.65 No 0 0 No -19 0.8 Yes 51 79.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 138266444 + NM_003852 TRIM24 1 0.32 0.29 18 1.56 79.66 32 4.11 No 26 0.79 Yes 0 0 No -31 0.64 No 44 60.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 54972797 - NM_005082 TRIM25 1 0.1 0.21 12 2.01 0 9 3.87 No 32 0.94 Yes 0 0 No -32 0.75 Yes 43 74.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 54973153 - NM_005082 TRIM25 1 0.07 0.14 9 2.46 78.59 35 6.14 Yes 8 0.24 No 24 0.83 Yes -23 0.74 Yes 47 76.84 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 54973196 - NM_005082 TRIM25 1 0.16 0.28 18 6.55 87.96 22 5.09 No 9 0.05 No 0 0 No -21 0.89 Yes 49 82.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 54974643 - NM_005082 TRIM25 1 0.09 0.15 10 8.55 90.26 29 6.58 Yes 56 -2.71 No 0 0 No -23 0.68 Yes 42 69.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 54975341 - NM_005082 TRIM25 1 0.06 0.1 7 7.56 73.15 36 6.48 Yes 74 -2.47 No 0 0 No -35 0.36 No 42 45.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 54978936 - NM_005082 TRIM25 1 0.38 1.11 41 -3.49 0 24 6.62 Yes 48 0.83 Yes 0 0 No -23 0.84 Yes 47 73.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 54978973 - NM_005082 TRIM25 1 0.14 0.43 24 5.39 80.92 24 5 No 11 0.84 Yes 19 0.82 Yes -23 0.9 Yes 47 79.86 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 54986239 - NM_005082 TRIM25 1 0.44 0.88 37 6.07 69.78 29 5.86 Yes 16 0.57 No 0 0 No -28 0.94 Yes 42 97.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 54989527 - NM_005082 TRIM25 1 1.01 1.96 56 8.3 88.04 21 6.16 Yes 8 1.25 Yes 20 0.81 Yes -20 0.82 Yes 50 61.29 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 54990495 - NM_005082 TRIM25 1 0.49 0.96 40 3.69 0 31 8.2 Yes 18 1.59 Yes 22 0.93 Yes -30 0.92 Yes 40 93.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 54990499 - NM_005082 TRIM25 1 0.06 0.13 8 -0.04 83 27 7.96 Yes 14 1.6 Yes 22 0.93 Yes -26 0.92 Yes 44 93.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 59058515 + NM_005762 TRIM28 1 0.01 0.13 7 7.6 80.57 20 4.87 No 7 0.82 Yes 0 0 No -25 0.88 Yes 45 89.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 59059403 + NM_005762 TRIM28 1 0.24 1.58 55 0.96 75.66 57 7.61 Yes 15 0.89 Yes 0 0 No -27 0.79 Yes 43 85.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 59060085 + NM_005762 TRIM28 1 0.07 0.42 23 -0.01 0 28 5.57 Yes NA NA NA 27 0.85 Yes -27 0.75 Yes 43 36.03 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 59060206 + NM_005762 TRIM28 1 0.11 0.68 34 3.85 71.91 28 5.83 Yes 53 -2.83 No 24 0.42 Yes -27 0.75 Yes 43 69.99 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 59060231 + NM_005762 TRIM28 1 0.22 1.32 53 -10.18 73.43 35 5.83 Yes 73 -1.86 No 24 0.42 Yes -27 0.59 No 43 73.18 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 59060252 + NM_005762 TRIM28 1 0.4 2.33 60 0.88 0 19 4.42 No 6 0.33 No 31 0.19 Yes -26 0.82 Yes 22 50.13 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 59060267 + NM_005762 TRIM28 1 0.02 0.13 7 0.43 76.07 23 4.69 No 21 0.32 No 0 0 No -41 0.49 No 47 55.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 59060365 + NM_005762 TRIM28 1 0.06 0.51 25 0.41 0 16 4.47 No 73 0.27 No 0 0 No -34 0.8 Yes 36 67.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 59060365 + NM_005762 TRIM28 1 0.05 0.39 23 0.41 0 16 4.47 No 73 0.27 No 0 0 No -34 0.8 Yes 36 67.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 59060700 + NM_005762 TRIM28 1 0.01 0.11 7 -11.79 69.05 29 7.04 Yes 6 1.02 Yes 0 0 No -27 0.51 No 43 55.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 59060931 + NM_005762 TRIM28 1 0.03 0.22 10 6.62 75.99 30 5.83 Yes 59 0.42 No 0 0 No -29 0.69 Yes 41 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 59061519 + NM_005762 TRIM28 1 0.02 0.17 10 -3.54 0 14 3.86 No 8 0.82 Yes 0 0 No -47 0.51 No 17 61.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 59061564 + NM_005762 TRIM28 1 0.05 0.44 26 8.38 83.63 25 6.3 Yes 6 1.67 Yes 0 0 No -24 0.88 Yes 46 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 119459651 + NM_012210 TRIM32 1 7.05 0.92 40 9.72 91.36 16 3.63 No 67 0.72 No 28 0.29 Yes -21 0.4 No 49 48.94 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 119459943 + NM_012210 TRIM32 1 123.22 17 72 9.6 95.15 25 6.36 Yes 59 1.1 Yes 21 0.68 Yes -24 0.61 No 46 70.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 114940632 - NM_015906 TRIM33 1 0.34 0.25 17 2.03 0 21 5.85 Yes 58 1.73 Yes 19 0.64 Yes -21 0.68 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 114963074 - NM_015906 TRIM33 1 8.21 6.96 72 5.82 81.27 36 5.81 Yes 23 0.76 No 24 0.83 Yes -35 0.43 No 46 58.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 114986809 - NM_015906 TRIM33 1 0.27 0.31 19 8.15 83.06 80 9.53 Yes 14 0.8 Yes 0 0 No -26 0.96 Yes 44 94.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 115049989 - NM_015906 TRIM33 1 0.28 0.17 10 9.15 82.77 61 9.36 Yes 48 2.22 Yes 0 0 No -24 0.95 Yes 46 94.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 27162390 - NM_171982 TRIM35 1 2.08 0.83 41 11.73 85.83 10 5.66 Yes -3 0 No 0 0 No -27 0.67 Yes 43 75.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 27165612 - NM_171982 TRIM35 1 0.34 0.15 10 7.79 86.16 20 5.74 Yes 7 -0.62 No 0 0 No -30 0.53 No 51 59.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 57079103 - NM_001005207 TRIM37 1 6.91 3.18 66 7.32 92.75 19 4.74 No 6 0.41 No 18 0.9 Yes -18 0.9 Yes 52 97.57 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 57079117 - NM_001005207 TRIM37 1 0.29 0.14 9 8.99 89.56 9 5.71 Yes 68 -2.82 No 18 0.9 Yes -26 0.7 Yes 44 66.54 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 57121112 - NM_001005207 TRIM37 1 0.27 0.11 8 9.9 97.68 18 4.9 No 30 0.69 No 0 0 No -23 0.56 No 53 79.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 57121230 - NM_001005207 TRIM37 1 0.99 0.44 22 12.85 83.31 33 6.24 Yes 20 0.85 Yes 0 0 No -32 0.83 Yes 38 87.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 57140181 - NM_001005207 TRIM37 1 0.36 0.26 13 10.6 98.51 18 5.73 Yes 23 0.38 No 0 0 No -27 0.89 Yes 43 77.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 57148246 - NM_001005207 TRIM37 1 1.98 0.67 34 4.32 81.04 23 4.8 No 69 0.14 No 0 0 No -22 0.9 Yes 48 90.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 57148330 - NM_001005207 TRIM37 1 0.45 0.18 11 5.07 94.25 23 3.64 No 3 0.72 No 23 0.78 Yes -22 0.59 No 48 54.36 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 57150503 - NM_001005207 TRIM37 1 0.57 0.22 14 4.38 77.97 21 4.01 No 2 0.54 No 26 0.47 Yes -20 0.59 No 50 69.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 57154096 - NM_001005207 TRIM37 1 3.4 1.9 55 3.56 68.91 31 5.1 No 18 0.62 No 0 0 No -30 0.74 Yes 36 45.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 57158550 - NM_001005207 TRIM37 1 0.66 0.4 21 4.46 75.98 37 5.46 No 60 -5.18 No 20 0.73 Yes -23 0.42 No 47 51.61 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 57167454 - NM_001005207 TRIM37 1 3.71 1.65 54 2.51 0 49 7.79 Yes 36 2.24 Yes 27 0.86 Yes -27 0.78 Yes 43 61.57 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 57170725 - NM_001005207 TRIM37 1 0.22 0.1 7 6.3 77.66 26 5.55 No 59 -3.69 No 0 0 No -22 0.57 No 40 35.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 57181553 - NM_001005207 TRIM37 1 0.53 0.21 10 4.32 80.15 44 7.53 Yes 31 2.01 Yes 0 0 No -31 0.64 No 27 67.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 25965060 + NM_006355 TRIM38 1 0.69 0.6 33 7.92 85.05 37 6.64 Yes 24 0.48 No 0 0 No -25 0.59 No 46 58.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 25966542 + NM_006355 TRIM38 1 0.35 0.31 17 1.79 64.08 24 6.08 Yes 63 1.4 Yes 22 0.87 Yes -23 0.87 Yes 47 65.74 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 25966720 + NM_006355 TRIM38 1 9.86 7.99 71 8.64 79.07 54 7.02 Yes 2 0.43 No 0 0 No -31 0.4 No 32 42.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 25972046 + NM_006355 TRIM38 1 0.78 0.9 38 8.5 76.48 27 6.14 Yes 14 0.49 No 0 0 No -26 0.87 Yes 44 85.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 25972099 + NM_006355 TRIM38 1 0.07 0.1 7 -12.37 69.59 25 7.42 Yes 12 1.07 Yes 0 0 No -24 0.92 Yes 46 85.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 25972150 + NM_006355 TRIM38 1 0.37 0.43 21 -1.65 0 18 4.24 No 63 1.05 Yes 0 0 No -17 0.82 Yes 53 60.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 25973200 + NM_006355 TRIM38 1 0.16 0.18 9 2.62 72.78 37 4.55 No 13 1.66 Yes 0 0 No -25 0.68 Yes 45 53.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 25973374 + NM_006355 TRIM38 1 0.12 0.14 8 -0.72 69.64 21 5.83 Yes 55 0.35 No 29 0.84 Yes -29 0.34 No 51 30.57 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 25975017 + NM_006355 TRIM38 1 0.47 0.58 30 -2.72 61.65 56 7.49 Yes 18 -2.97 No 0 0 No -27 0.28 No 22 58.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 25975032 + NM_006355 TRIM38 1 0.19 0.21 12 6.41 94.03 19 4.37 No 18 0.09 No 0 0 No -19 0.46 No 51 44.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 25975130 + NM_006355 TRIM38 1 0.55 0.69 33 8.59 87.5 29 5.22 No 48 -1.35 No 0 0 No -23 0.54 No 47 64.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 25978762 + NM_006355 TRIM38 1 0.31 0.36 22 2.97 0 36 8.46 Yes 23 0.39 No 0 0 No -35 0.85 Yes 35 67.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 25978915 + NM_006355 TRIM38 1 0.15 0.18 12 0.54 83.24 22 6.83 Yes 63 1.73 Yes 0 0 No -21 0.87 Yes 49 90.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 25978919 + NM_006355 TRIM38 1 1.51 1.75 53 2.76 0 26 7.11 Yes 67 1.73 Yes 0 0 No -25 0.88 Yes 45 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 25982025 + NM_006355 TRIM38 1 0.3 0.36 21 0.08 74.95 44 6.32 Yes 31 1.13 Yes 0 0 No -25 0.77 Yes 45 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 25982028 + NM_006355 TRIM38 1 0.37 0.47 22 0.14 73.67 47 6.51 Yes 34 1.12 Yes 0 0 No -28 0.64 No 42 71.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 25983395 + NM_006355 TRIM38 1 0.56 0.6 30 0.91 0 34 5.27 No 48 1.42 Yes 0 0 No -33 0.53 No 37 50.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 99498584 - NM_033017 TRIM4 1 0.17 0.14 8 -0.03 0 17 3.93 No -3 0.14 No 0 0 No -25 0.44 No 53 19.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99498591 - NM_033017 TRIM4 1 0.61 0.49 26 -3.96 50.09 30 5.42 No 75 -2.81 No 0 0 No -18 0.26 No 40 14.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99499798 - NM_033017 TRIM4 1 17.59 13.39 72 8.04 91.27 25 5.2 No 12 0.42 No 24 0.74 Yes -25 0.37 No 46 57.52 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 99506346 - NM_033017 TRIM4 1 0.21 0.15 10 2.69 87.6 24 4.9 No 74 -3.48 No 0 0 No -23 0.78 Yes 47 68.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 180657535 + NM_033549 TRIM41 1 0.38 0.24 15 0.23 65.3 40 5.87 Yes 51 0.32 No 0 0 No -39 0.52 No 31 28.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 180659965 + NM_033549 TRIM41 1 1.65 0.56 28 2.87 70.02 18 5.56 Yes 5 0.77 No 0 0 No -17 0.75 Yes 53 85.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 180660715 + NM_033549 TRIM41 1 0.48 0.17 10 5.16 82.33 13 4.65 No 0 0.07 No 0 0 No -26 0.54 No 51 31.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 180660698 + NM_033549 TRIM41 1 0.55 0.21 14 4.83 67.29 20 6.4 Yes 7 0.93 Yes 26 0.86 Yes -19 0.85 Yes 51 87.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 180660715 + NM_033549 TRIM41 1 0.8 0.28 16 5.16 82.33 13 4.65 No 0 0.07 No 0 0 No -26 0.54 No 51 31.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 35712026 + NM_017583 TRIM44 1 0.05 0.15 10 6.23 75.12 49 8.08 Yes 36 0.71 No 0 0 No -35 0.73 Yes 35 80.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 35715833 + NM_017583 TRIM44 1 0.05 0.18 9 -0.4 60.31 36 8.14 Yes 23 1.47 Yes 0 0 No -35 0.94 Yes 35 93.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 35724940 + NM_017583 TRIM44 1 0.07 0.18 12 8.26 84.21 21 4.89 No 23 0.87 Yes 0 0 No -21 0.66 No 49 78.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 35745808 + NM_017583 TRIM44 1 0.11 0.35 21 7.14 88.52 23 5 No 25 0.88 Yes 0 0 No -37 0.4 No 22 56.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 35745821 + NM_017583 TRIM44 1 0.18 0.51 26 9.17 86.5 18 4.69 No 38 0.88 Yes 0 0 No -17 0.64 No 53 85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 35752654 + NM_017583 TRIM44 1 0.15 0.29 18 7.96 88.4 41 8.28 Yes 28 1.96 Yes 0 0 No -40 0.69 Yes 30 84.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 35753182 + NM_017583 TRIM44 1 0.05 0.11 8 10.29 91.2 49 7.05 Yes 2 1.51 Yes 0 0 No -27 0.66 No 43 67.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 35767892 + NM_017583 TRIM44 1 0.21 0.5 27 10.32 91.03 22 6.63 Yes 9 1.13 Yes 0 0 No -21 0.85 Yes 49 93.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 35802886 + NM_017583 TRIM44 1 0.11 0.26 17 7.55 91.08 34 7.55 Yes 50 0.42 No 0 0 No -23 0.56 No 47 64.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 35826932 + NM_017583 TRIM44 1 0.12 0.31 18 6.76 91.54 17 4.97 No 4 1.2 Yes 0 0 No -25 0.91 Yes 45 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 5689330 - NM_033093 TRIM5 1 2.17 1.39 27 8.08 86.87 27 7.42 Yes 14 1.44 Yes 0 0 No -26 0.93 Yes 44 95.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 5705740 - NM_033093 TRIM5 1 0.45 0.32 14 7.79 82.2 28 5.48 No 15 1.3 Yes 0 0 No -27 0.8 Yes 43 91.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100729039 + NM_030961 TRIM56 1 1.92 1.28 50 9.4 81.63 32 6.92 Yes 63 -2.5 No 0 0 No -30 0.76 Yes 40 71.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 100730352 + NM_030961 TRIM56 1 1.15 0.76 31 -7.78 58.71 35 6.93 Yes 22 1.86 Yes 0 0 No -34 0.83 Yes 36 76.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 160163036 - NM_173084 TRIM59 1 1.74 1.35 43 5.55 86.87 20 5.04 No 7 0.81 Yes 0 0 No -24 0.89 Yes 46 94.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 160163036 - NM_173084 TRIM59 1 0.17 0.13 7 5.55 86.87 20 5.04 No 7 0.81 Yes 0 0 No -24 0.89 Yes 46 94.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 160165631 - NM_173084 TRIM59 1 0.72 0.57 25 7.44 88.67 32 6.6 Yes 19 0.29 No 31 0.77 Yes -25 0.61 No 45 73.93 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 33629951 - NM_018207 TRIM62 1 1.65 0.11 8 1.19 77.37 16 5.12 No 3 2.15 Yes 0 0 No -26 0.58 No 49 55.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73888621 - NM_001256124 TRIM65 1 3.19 0.74 32 5.85 78.46 23 5.39 No 40 2.3 Yes 23 0.89 Yes -22 0.48 No 48 64.53 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 8642724 - NM_014818 TRIM66 1 5.22 0.44 25 4.42 82.74 17 5.39 No 73 0.56 No 0 0 No -16 0.56 No 54 68.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 8642785 - NM_014818 TRIM66 1 58.1 5.54 71 5.79 77.46 25 5.98 Yes 12 0.59 No 24 0.93 Yes -24 0.93 Yes 46 93.44 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 8643296 - NM_014818 TRIM66 1 6.42 0.83 32 7.31 88.46 23 5.25 No 52 -3.25 No 0 0 No -22 0.84 Yes 48 85.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 8643447 - NM_014818 TRIM66 1 8.04 0.99 43 3.63 83.17 24 5.87 Yes 26 -2.32 No 0 0 No -23 0.83 Yes 47 89.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 8659729 - NM_014818 TRIM66 1 7.33 0.79 38 9.95 88.58 18 5.47 No 5 0.56 No 0 0 No -25 0.59 No 45 56.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 8661864 - NM_014818 TRIM66 1 1.22 0.1 7 1.35 75.34 22 4.87 No 29 -2.06 No 0 0 No -21 0.86 Yes 49 64.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 8662029 - NM_014818 TRIM66 1 4.35 0.36 22 5.88 83.48 20 4.75 No NA NA NA 0 0 No -23 0.59 No 47 61.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 8662236 - NM_014818 TRIM66 1 2.22 0.26 14 10.97 90.21 34 5.74 Yes 21 1.54 Yes 0 0 No -29 0.61 No 37 84.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 8663518 - NM_014818 TRIM66 1 8.7 0.74 36 8.12 88.82 21 5.8 Yes 58 -5.03 No 0 0 No -20 0.84 Yes 50 86.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 8664388 - NM_014818 TRIM66 1 8.49 0.72 36 0.95 88.76 41 6.3 Yes 24 0.84 Yes 0 0 No -33 0.48 No 34 64.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 4623637 - NM_018073 TRIM68 1 1.1 0.29 17 -0.85 0 11 3.87 No 15 1.31 Yes 21 0.79 Yes -27 0.49 No 43 74.19 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 45030276 + NM_182985 TRIM69 1 2.19 1 40 13.37 92.63 38 6.61 Yes 42 0.68 No 0 0 No -40 0.84 Yes 30 90.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 45047081 + NM_182985 TRIM69 1 0.33 0.15 10 1.36 69.29 13 4.87 No 0 0.14 No 23 0.9 Yes -22 0.63 No 48 45.66 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 45050810 + NM_182985 TRIM69 1 20.24 4.68 66 -10 68.77 22 6.28 Yes 69 -1.53 No 21 0.7 Yes -21 0.61 No 45 48.49 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 45050875 + NM_182985 TRIM69 1 0.61 0.17 10 -6.1 0 13 4.24 No 0 0.08 No 0 0 No -12 0.36 No 58 27.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 45050886 + NM_182985 TRIM69 1 0.52 0.13 9 1.3 0 14 4.47 No 76 -2.32 No 0 0 No -16 0.75 Yes 54 58.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104414412 + NR_144321 TRIM8 1 0.15 0.13 8 -3.05 68.98 30 6.78 Yes 17 1.48 Yes 0 0 No -29 0.76 Yes 41 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 104417679 + NR_144321 TRIM8 1 0.17 0.25 17 8.38 81.48 37 6.89 Yes 1 1.54 Yes 0 0 No -36 0.66 No 34 68.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 14148061 + NR_134469 TRIO 1 0.28 0.1 7 12.33 89.53 29 3.66 No 10 0.54 No 0 0 No -28 0.61 No 42 62.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 14222890 + NR_134469 TRIO 1 0.83 0.25 13 11.23 93.08 41 6.85 Yes 28 1.01 Yes 0 0 No -40 0.71 Yes 30 85.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 14279502 + NR_134469 TRIO 1 0.1 0.11 8 10.24 83.53 57 7.48 Yes 44 0.28 No 0 0 No -27 0.85 Yes 43 72.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 14283771 + NR_134469 TRIO 1 1.32 1.39 48 8.69 76.75 29 6.32 Yes 72 1.71 Yes 0 0 No -26 0.75 Yes 44 84.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 14286958 + NR_134469 TRIO 1 0.15 0.17 10 1.98 77.92 13 5.1 No 0 1.54 Yes 23 0.84 Yes -22 0.8 Yes 48 70.23 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 14290875 + NR_134469 TRIO 1 0.3 0.21 12 0.29 85.39 12 4.58 No 63 0.79 Yes 0 0 No -24 0.61 No 46 88.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 14292082 + NR_134469 TRIO 1 0.11 0.1 7 6.12 88.67 35 5.17 No 10 1.31 Yes 0 0 No -34 0.66 No 48 49.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 14311403 + NR_134469 TRIO 1 1.62 2.15 57 5.95 82.49 31 7.68 Yes 59 0.9 Yes 0 0 No -30 0.97 Yes 40 96.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 14399911 + NR_134469 TRIO 1 0.11 0.1 7 3.06 74.58 22 4.9 No 61 0.98 Yes 0 0 No -21 0.92 Yes 49 87.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 14399927 + NR_134469 TRIO 1 0.74 0.58 27 2.04 90.16 19 4.8 No 25 0.95 Yes 0 0 No -18 0.73 Yes 52 68.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 14405964 + NR_134469 TRIO 1 0.07 0.1 7 -2.9 0 11 3.29 No 9 2.22 Yes 0 0 No -21 0.47 No 49 80.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 14420355 + NR_134469 TRIO 1 0.42 0.36 22 8.46 90.44 24 4.96 No 4 0.95 Yes 0 0 No -23 0.8 Yes 47 87.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 14420566 + NR_134469 TRIO 1 0.48 0.39 20 6.73 77.67 25 5.29 No 12 0.54 No 24 0.95 Yes -24 0.84 Yes 46 88.14 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 14459148 + NR_134469 TRIO 1 0.15 0.14 10 7.68 88.58 16 5.28 No 68 -4.46 No 0 0 No -23 0.17 No 42 27.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 14460797 + NR_134469 TRIO 1 0.86 0.71 31 8.1 76.81 32 7.03 Yes 61 0.56 No 0 0 No -25 0.56 No 39 54.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 14466651 + NR_134469 TRIO 1 0.5 0.36 21 5.8 83.82 31 6 Yes 22 0.9 Yes 0 0 No -30 0.39 No 40 65.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 14482726 + NR_134469 TRIO 1 0.73 0.51 28 5.12 87.16 15 5.2 No 2 0.7 No 0 0 No -23 0.59 No 50 49.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 14485284 + NR_134469 TRIO 1 1.64 1.36 48 6.08 73.93 18 5.66 Yes 22 0.89 Yes 0 0 No -25 0.57 No 45 51.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 14496991 + NR_134469 TRIO 1 1.54 1.31 46 -2.44 0 27 5.5 No 72 0.51 No 0 0 No -26 0.69 Yes 44 86.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 14498008 + NR_134469 TRIO 1 0.73 0.61 28 9.83 85.14 29 5.29 No 67 1.37 Yes 0 0 No -28 0.88 Yes 42 92.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 14498206 + NR_134469 TRIO 1 0.15 0.11 7 2.62 0 16 4.24 No 28 1.47 Yes 24 0.87 Yes -30 0.53 No 40 60.51 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 14504118 + NR_134469 TRIO 1 0.48 0.25 15 5.59 83.26 29 5.48 No 27 -1.92 No 0 0 No -26 0.78 Yes 44 58.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 14506853 + NR_134469 TRIO 1 0.41 0.24 12 7.81 83.32 26 5.66 Yes 57 1.07 Yes 0 0 No -25 0.6 No 45 72.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 14506905 + NR_134469 TRIO 1 0.52 0.29 14 6.9 85.69 24 5.47 No 65 0.86 Yes 0 0 No -26 0.65 No 44 65.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 14507532 + NR_134469 TRIO 1 0.35 0.24 16 6.55 75.56 23 5.11 No 3 1.73 Yes 0 0 No -22 0.86 Yes 48 90.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38150922 + NM_001039141 TRIOBP 1 16.81 7.44 72 5.62 82.7 22 6.93 Yes 9 1.96 Yes 0 0 No -21 0.95 Yes 49 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 38151089 + NM_001039141 TRIOBP 1 0.26 0.18 10 -1 56.81 26 5.2 No 63 -4.48 No 0 0 No -23 0.53 No 32 35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 38155423 + NM_001039141 TRIOBP 1 17.6 8.17 72 10.54 83.83 32 8.33 Yes 5 0.65 No 31 0.86 Yes -22 0.75 Yes 48 57.48 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 38156367 + NM_001039141 TRIOBP 1 1.06 0.44 25 5.28 78.17 27 6.08 Yes 63 0.15 No 0 0 No -26 0.88 Yes 44 82.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 38164049 + NM_001039141 TRIOBP 1 0.35 0.24 13 5.27 80.24 13 6.56 Yes 0 2.45 Yes 0 0 No -26 0.59 No 44 54.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 38167636 + NM_001039141 TRIOBP 1 0.39 0.21 12 1.3 66.43 32 5.74 Yes 56 -1.83 No 0 0 No -26 0.41 No 44 43.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 38167641 + NM_001039141 TRIOBP 1 0.51 0.21 10 -2 0 37 6.16 Yes 61 -1.83 No 0 0 No -31 0.41 No 39 36.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 6751041 + NM_001288962 TRIP10 1 0.22 0.22 14 2.03 75.37 18 6.12 Yes 2 0.21 No 26 0.35 Yes -23 0.33 No 46 46.79 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 6751044 + NM_001288962 TRIP10 1 1.46 1.58 56 2.73 77.71 21 6.28 Yes 5 0.22 No 26 0.35 Yes -26 0.36 No 43 36.07 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 92436232 - NM_001321851 TRIP11 1 0.17 0.13 8 -0.41 0 16 3.87 No 15 1.22 Yes 0 0 No -27 0.83 Yes 43 84.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 92439175 - NM_001321851 TRIP11 1 0.49 0.26 16 7.13 76.35 24 5.48 No 39 0.82 Yes 0 0 No -23 0.59 No 47 54.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 92441953 - NM_001321851 TRIP11 1 0.31 0.31 17 7.54 0 15 3.79 No 68 0.31 No 0 0 No -22 0.78 Yes 48 72.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 92443593 - NM_001321851 TRIP11 1 0.21 0.15 9 5.06 75.65 22 6.02 Yes 70 -4.21 No 31 0.69 Yes -31 0.82 Yes 39 88.71 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 92474636 - NM_001321851 TRIP11 1 0.58 0.47 27 7.61 78.57 22 5.73 Yes 9 0.92 Yes 0 0 No -21 0.77 Yes 49 76.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 92483533 - NM_001321851 TRIP11 1 0.57 0.53 26 8.05 90.29 29 3.95 No 37 0.56 No 0 0 No -33 0.48 No 37 54.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 92497121 - NM_001321851 TRIP11 1 1.55 1.32 45 10.15 87.06 38 6.58 Yes 25 1.5 Yes 27 0.81 Yes -37 0.72 Yes 43 75.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 230657847 - NM_001284216 TRIP12 1 10.72 35.32 72 8.98 91.25 24 4.17 No 29 1.84 Yes 28 0.75 Yes -23 0.47 No 29 41 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 230657868 - NM_001284216 TRIP12 1 0.13 0.42 23 -4.45 0 21 5.64 Yes 8 1.87 Yes 26 0.94 Yes -20 0.48 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 230662546 - NM_001284216 TRIP12 1 0.21 0.61 30 -1.14 81.12 27 8.09 Yes 14 0.78 Yes 0 0 No -27 0.76 Yes 43 74.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 230670519 - NM_001284216 TRIP12 1 25.81 44.78 72 6.45 84.27 18 4.79 No 5 0.58 No 26 0.67 Yes -21 0.65 No 49 72.29 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 230672540 - NM_001284216 TRIP12 1 0.04 0.18 13 -2.22 0 20 4.58 No 73 1.19 Yes 0 0 No -23 0.41 No 47 80.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 230673116 - NM_001284216 TRIP12 1 0.06 0.24 11 -4.68 0 14 4.12 No 49 1.11 Yes 34 0.68 Yes -14 0.63 No 57 53.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 230678763 - NM_001284216 TRIP12 1 0.08 0.29 17 8.44 85.64 28 5.42 No 15 0.89 Yes 20 0.93 Yes -27 0.8 Yes 43 91.3 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 230695538 - NM_001284216 TRIP12 1 2.61 5.86 71 3.32 0 21 4.47 No 33 2.42 Yes 21 0.48 Yes -45 0.86 Yes 25 93.03 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 230765575 - NM_001284216 TRIP12 1 0.38 0.49 28 7.53 85.05 20 5.48 No 28 0.99 Yes 27 0.37 Yes -32 0.55 No 38 80.05 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 230768570 - NM_001284216 TRIP12 1 0.19 0.28 17 5.44 80.12 34 8.05 Yes 21 1.61 Yes 0 0 No -33 0.95 Yes 37 96.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 230773799 - NM_001284216 TRIP12 1 5.25 7.14 70 3.01 0 38 8.18 Yes 25 1.52 Yes 0 0 No -37 0.92 Yes 33 96.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 230773803 - NM_001284216 TRIP12 1 1.06 1.42 53 2.3 84.41 34 7.93 Yes 21 1.53 Yes 0 0 No -33 0.91 Yes 37 96.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 896824 + NM_004237 TRIP13 1 2.39 2.4 60 6.83 86.26 12 4.71 No -1 0.26 No 24 0.59 Yes -28 0.7 Yes 42 67 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 905582 + NM_004237 TRIP13 1 0.24 0.17 11 5.41 87.99 47 6.25 Yes 34 1 Yes 0 0 No -34 0.84 Yes 36 85.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 916193 + NM_004237 TRIP13 1 0.59 0.35 21 4.51 86.85 13 4.79 No 0 0.8 Yes 0 0 No -18 0.74 Yes 52 87.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 916207 + NM_004237 TRIP13 1 0.2 0.14 9 5.39 86.89 22 3.8 No 14 0.83 Yes 0 0 No -21 0.81 Yes 49 59.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 64710820 + NM_001321924 TRIP4 1 0.32 0.15 10 2.01 79.98 13 4.9 No 43 0.7 No 0 0 No -22 0.63 No 48 58.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 64722983 + NM_001321924 TRIP4 1 0.22 0.17 12 6.47 86.18 27 5.1 No 14 2.28 Yes 0 0 No -26 0.88 Yes 44 91.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64737520 + NM_001321924 TRIP4 1 1.3 0.81 31 7.18 82.28 53 8.78 Yes 40 2.06 Yes 0 0 No -52 0.89 Yes 18 95.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 100465532 + NM_003302 TRIP6 1 1.58 1.74 53 5.81 77.43 28 6.04 Yes 45 0.84 Yes 27 0.77 Yes -27 0.6 No 43 64.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 100466363 + NM_003302 TRIP6 1 0.29 0.26 18 11.37 93.09 16 6.28 Yes 64 -3.03 No 0 0 No -42 0.62 No 28 83.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 93898896 - NM_001191036 TRIQK 1 8.2 1.79 55 8.37 91.77 34 5.28 No NA NA NA 30 0.37 Yes -30 0.47 No 40 80.99 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 93898960 - NM_001191036 TRIQK 1 3.02 0.56 30 0.46 0 36 3.79 No 40 1.66 Yes 0 0 No -29 0.8 Yes 41 82.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 93904521 - NM_001191036 TRIQK 1 0.63 0.22 15 6.2 81.07 38 6.24 Yes 25 0.99 Yes 0 0 No -37 0.68 Yes 33 55.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 93922141 - NM_001191036 TRIQK 1 1.03 0.21 8 11.78 85.61 42 8.67 Yes 29 1.12 Yes 0 0 No -24 0.62 No 46 51.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 40313764 - NR_132415 TRIT1 1 1.14 0.31 15 0.05 0 14 3.87 No 74 1.43 Yes 20 0.69 Yes -26 0.48 No 52 62.89 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 40317443 - NR_132415 TRIT1 1 7.35 1.32 41 0.07 83.24 22 5.95 Yes 1 0.37 No 25 0.85 Yes -21 0.44 No 41 59.65 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 40317443 - NR_132415 TRIT1 1 2.22 0.38 16 0.07 83.24 22 5.95 Yes 1 0.37 No 25 0.85 Yes -21 0.44 No 41 59.65 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 40318624 - NR_132415 TRIT1 1 2.74 0.92 43 9.44 83.23 22 6.15 Yes 9 1.07 Yes 0 0 No -21 0.72 Yes 49 71.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 40328519 - NR_132415 TRIT1 1 0.45 0.14 9 5.99 84.99 27 5.39 No 14 0.62 No 0 0 No -26 0.84 Yes 44 88.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 40328608 - NR_132415 TRIT1 1 0.41 0.14 8 6.18 79.42 27 6.37 Yes 45 -1.93 No 0 0 No -26 0.87 Yes 44 83.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 40343538 - NR_132415 TRIT1 1 0.53 0.15 11 6.79 92.43 21 5.66 Yes 8 0.63 No 0 0 No -20 0.41 No 50 61.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 100676309 - NM_001330725 TRMO 1 0.72 0.18 12 10.86 88.42 41 6.86 Yes 76 1.59 Yes 0 0 No -40 0.69 Yes 30 76.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 13223432 - NM_001136035 TRMT1 1 1.07 0.92 44 9.81 83.59 34 6.24 Yes 21 1.13 Yes 0 0 No -33 0.45 No 49 61.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 13226217 - NM_001136035 TRMT1 1 0.09 0.14 7 5.98 74.31 30 5.47 No 62 -1.85 No 29 0.77 Yes -29 0.81 Yes 41 80.21 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 13227155 - NM_001136035 TRMT1 1 6 4.64 72 6.39 70.38 30 6.34 Yes 17 1.36 Yes 29 0.93 Yes -29 0.56 No 41 83.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 37762539 + NR_104612 TRMT10B 1 4.18 0.5 25 2.59 67.68 33 7.25 Yes 20 1.89 Yes 32 0.92 Yes -32 0.72 Yes 38 88.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 37773150 + NR_104612 TRMT10B 1 0.68 0.18 11 6.22 89.35 27 5.29 No 61 0.44 No 0 0 No -26 0.88 Yes 44 85.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37773302 + NR_104612 TRMT10B 1 1.13 0.24 12 6.36 80.12 33 6.63 Yes 20 1.48 Yes 0 0 No -32 0.92 Yes 38 92.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37777417 + NR_104612 TRMT10B 1 4.23 0.63 28 7.94 92.42 20 4.9 No 7 0.34 No 0 0 No -19 0.58 No 51 75.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 37777624 + NR_104612 TRMT10B 1 33.29 4.75 70 6 70.33 32 5.96 Yes 19 1.23 Yes 31 0.88 Yes -31 0.85 Yes 39 90.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 126314933 + NM_001031712 TRMT11 1 0.62 0.31 18 -0.32 86.44 26 5.57 Yes 34 0.81 Yes 30 0.17 Yes -26 0.45 No 45 48.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 126314938 + NM_001031712 TRMT11 1 1.6 0.69 31 0.86 0 31 6 Yes 39 0.81 Yes 30 0.17 Yes -30 0.47 No 40 53.26 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 126319177 + NM_001031712 TRMT11 1 0.11 0.1 7 -5.43 0 20 4.94 No 7 0.67 No 28 0.78 Yes -44 0.37 No 59 39.52 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 126327756 + NM_001031712 TRMT11 1 1.47 0.96 38 9.26 85.27 27 7.13 Yes 14 1.75 Yes 0 0 No -26 0.87 Yes 44 91.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 126327987 + NM_001031712 TRMT11 1 12.06 7.19 72 7.19 87.65 24 5.29 No 11 1.59 Yes 23 0.95 Yes -23 0.94 Yes 47 96.36 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 126327990 + NM_001031712 TRMT11 1 2.26 1.44 52 5.29 84.34 27 5.56 Yes 14 1.59 Yes 0 0 No -26 0.94 Yes 44 96.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 126329771 + NM_001031712 TRMT11 1 2.58 1.11 46 1.38 67.65 44 6.21 Yes 25 0.73 No 28 0.49 Yes -37 0.7 Yes 33 89.33 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 126329802 + NM_001031712 TRMT11 1 15.42 6.39 70 7.65 85.19 28 5.04 No 56 0.75 No 28 0.49 Yes -27 0.61 No 43 75.89 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 126330480 + NM_001031712 TRMT11 1 0.26 0.13 8 11.81 95.35 19 3.8 No 6 0.53 No 26 0.83 Yes -26 0.51 No 52 66.2 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 126331523 + NM_001031712 TRMT11 1 0.52 0.19 10 9.94 98.88 50 5.59 Yes 17 0.41 No 0 0 No -25 0.77 Yes 45 83.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 126332070 + NM_001031712 TRMT11 1 10.03 3.97 67 9.58 89.83 42 7.82 Yes 9 0.74 No 0 0 No -21 0.44 No 44 44.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 126334120 + NM_001031712 TRMT11 1 0.22 0.19 13 2.95 0 34 7.9 Yes 21 0.94 Yes 28 0.89 Yes -33 0.71 Yes 37 89.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 126347343 + NM_001031712 TRMT11 1 0.21 0.21 10 8.97 81.16 72 8.05 Yes 59 1.4 Yes 0 0 No -24 0.52 No 46 51.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 64084463 - NM_001286082 TRMT112 1 0.01 0.13 8 -3.83 0 10 4 No 38 0.4 No 24 0.93 Yes -50 0.39 No 17 21.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 64084620 - NM_001286082 TRMT112 1 5957.6 925.15 72 9.47 82.46 22 5.74 Yes 9 0.16 No 21 0.44 Yes -21 0.79 Yes 49 78.28 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 100602579 + NM_019083 TRMT13 1 0.71 0.71 32 -0.27 0 25 6.19 Yes 12 0.46 No 0 0 No -34 0.92 Yes 36 97.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100606005 + NM_019083 TRMT13 1 0.98 0.64 31 5.71 82.33 25 3.99 No 25 0.13 No 25 0.89 Yes -25 0.66 No 45 83.06 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 100606005 + NM_019083 TRMT13 1 33.92 20.71 72 5.71 82.33 25 3.99 No 25 0.13 No 25 0.89 Yes -25 0.66 No 45 83.06 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 100606400 + NM_019083 TRMT13 1 1.57 0.57 30 1.83 66.46 30 4.49 No 52 0.84 Yes 26 0.46 Yes -29 0.83 Yes 41 82.29 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 100606420 + NM_019083 TRMT13 1 3.68 1.06 46 8.29 81.64 17 4.69 No 72 0.84 Yes 0 0 No -23 0.37 No 47 53.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 100606522 + NM_019083 TRMT13 1 9.72 2.92 65 2.17 74.14 16 5.09 No 74 -2.3 No 0 0 No -24 0.95 Yes 46 91.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 100612082 + NM_019083 TRMT13 1 11.96 4.4 67 5.32 84.41 29 6.95 Yes 16 1.38 Yes 0 0 No -24 0.43 No 46 74.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 100612631 + NM_019083 TRMT13 1 2.1 0.76 36 5.62 82.14 40 5.42 No 53 0.03 No 0 0 No -28 0.37 No 31 30.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 100613648 + NM_019083 TRMT13 1 6.52 2.39 58 8.55 88.81 24 7.48 Yes 55 -2.54 No 0 0 No -23 0.63 No 47 80.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 100613727 + NM_019083 TRMT13 1 0.49 0.19 12 4.99 86.87 12 5.38 No 74 -3.7 No 0 0 No -22 0.72 Yes 48 74.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 185093049 - NM_030934 TRMT1L 1 0.19 0.26 14 1.72 82.57 39 6.79 Yes 26 0.84 Yes 0 0 No -39 0.52 No 31 67.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 185105541 - NM_030934 TRMT1L 1 0.13 0.17 11 11.55 94.53 13 6.04 Yes 34 0.9 Yes 0 0 No -30 0.75 Yes 41 79.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 185106639 - NM_030934 TRMT1L 1 0.17 0.24 13 7.35 81.33 33 7.59 Yes 54 0.68 No 32 0.81 Yes -32 0.74 Yes 38 79.09 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 185116850 - NM_030934 TRMT1L 1 0.12 0.18 9 6.02 87.34 31 3.84 No 76 -4.03 No 0 0 No -20 0.42 No 50 60.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 20100340 - NM_182984 TRMT2A 1 0.22 0.17 8 2.11 65.33 24 5.2 No 8 -1.61 No 23 0.93 Yes -23 0.74 Yes 47 58.54 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 20100358 - NM_182984 TRMT2A 1 0.15 0.13 7 -6.84 0 19 4.47 No 61 -1.45 No 23 0.93 Yes -20 0.61 No 52 27.6 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 20101028 - NM_182984 TRMT2A 1 0.41 0.26 15 3.81 80.53 26 5.75 Yes NA NA NA 0 0 No -23 0.59 No 47 69.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 20101085 - NM_182984 TRMT2A 1 2.95 2.24 63 10.57 91.51 23 4.36 No 31 0.84 Yes 22 0.73 Yes -22 0.62 No 48 70.47 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 20102397 - NM_182984 TRMT2A 1 1.02 1.06 44 -0.56 68.9 31 6.55 Yes 18 1.3 Yes 27 0.93 Yes -30 0.87 Yes 40 84.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 20103078 - NM_182984 TRMT2A 1 4.78 1.75 59 1.21 60.38 41 10.61 Yes 41 2.37 Yes 40 0.66 Yes -40 0.53 No 17 79.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 20104515 - NM_182984 TRMT2A 1 1.74 0.21 14 4.69 89.53 20 5.1 No 7 1.1 Yes 23 0.95 Yes -19 0.86 Yes 51 87.5 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 100268729 - NM_001167970 TRMT2B 1 13.25 6.17 70 3.97 84.41 36 8.49 Yes 23 1.51 Yes 38 0.55 Yes -35 0.49 No 35 70.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chrX 100281462 - NM_001167970 TRMT2B 1 0.41 0.17 11 3.97 84.41 24 6.48 Yes 11 1.06 Yes 0 0 No -26 0.54 No 44 65.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 8444487 + NM_152544 TRMT44 1 1.18 0.33 15 8.85 88.42 32 5.81 Yes 61 -1.15 No 0 0 No -27 0.87 Yes 43 88.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 8451424 + NM_152544 TRMT44 1 22.35 5.21 72 7.23 87.79 26 4.48 No 57 0.63 No 25 0.81 Yes -25 0.74 Yes 45 79.17 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 8451428 + NM_152544 TRMT44 1 1.72 0.42 24 0.35 0 30 4.72 No 61 0.63 No 0 0 No -29 0.66 Yes 41 73.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 8459244 + NM_152544 TRMT44 1 0.8 0.35 17 6.24 89.1 21 4.57 No 14 0.85 Yes 0 0 No -20 0.32 No 51 41.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 8470707 + NM_152544 TRMT44 1 3.61 0.79 32 9.01 86.16 21 5.66 Yes 75 -0.02 No 0 0 No -20 0.63 No 50 61.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 8477256 + NM_152544 TRMT44 1 6.56 1.31 49 7.92 80.19 26 8.54 Yes 13 0.81 Yes 0 0 No -25 0.71 Yes 45 70.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 5922677 - NM_015939 TRMT6 1 0.84 0.68 38 1.35 0 10 3.87 No 17 1.01 Yes 0 0 No -33 0.76 Yes 37 85.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 5923345 - NM_015939 TRMT6 1 0.4 0.38 21 6.98 80.64 14 5.88 Yes 62 -2.95 No 0 0 No -30 0.86 Yes 40 88.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 5924677 - NM_015939 TRMT6 1 0.52 0.54 30 -9.82 0 31 5.54 No 31 0.35 No 0 0 No -30 0.4 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 5925559 - NM_015939 TRMT6 1 0.67 0.63 29 -1.08 82.5 26 4.6 No 58 -3.16 No 0 0 No -25 0.79 Yes 45 79.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 103996486 + NM_152307 TRMT61A 1 3.54 1.21 41 6.58 78.15 30 6.28 Yes 17 0.87 Yes 0 0 No -29 0.62 No 41 67.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 103997492 + NM_152307 TRMT61A 1 0.19 0.17 9 9.62 81.6 29 5.51 No 20 0.25 No 0 0 No -24 0.6 No 46 66.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 29073269 - NM_017910 TRMT61B 1 1.41 0.42 22 -1.72 69.39 30 5.83 Yes 69 1.44 Yes 0 0 No -29 0.82 Yes 41 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 29074139 - NM_017910 TRMT61B 1 2.87 0.96 42 4.73 75.39 23 4.68 No 27 0.51 No 0 0 No -22 0.81 Yes 48 86.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 29084904 - NM_017910 TRMT61B 1 0.23 0.13 8 6.42 83.74 21 7.21 Yes 75 1.35 Yes 0 0 No -20 0.85 Yes 50 92.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 29086978 - NM_017910 TRMT61B 1 0.46 0.26 16 10.42 95.65 28 3.72 No 5 0.26 No 0 0 No -24 0.6 No 46 45.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 46739158 + NM_001282784 TRMU 1 548.14 80.19 72 7.8 84.65 23 5.24 No 53 0.91 Yes 22 0.78 Yes -22 0.8 Yes 48 84.66 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 46751300 + NM_001282784 TRMU 1 0.2 0.13 8 3.06 70.98 20 5.1 No 57 0.61 No 22 0.52 Yes -19 0.69 Yes 51 56.9 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 28893831 + NR_003109 TRNAU1AP 1 0.32 0.22 14 5.85 74.69 33 5.32 No 76 0.53 No 0 0 No -32 0.82 Yes 38 76.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 28897690 + NR_003109 TRNAU1AP 1 0.27 0.28 16 -12.81 68.61 35 6.98 Yes 22 1.4 Yes 0 0 No -34 0.84 Yes 36 97.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28901100 + NR_003109 TRNAU1AP 1 1.31 1.26 49 9.19 86.62 30 7.28 Yes 17 1.38 Yes 29 0.67 Yes -29 0.74 Yes 41 78.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 3169629 + NM_001302946 TRNT1 1 0.97 0.22 12 6.87 85.32 15 5.1 No 54 0.35 No 24 0.52 Yes -19 0.44 No 46 19.5 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 3171602 + NM_001302946 TRNT1 1 7.31 8.28 72 8.91 87.63 20 5.09 No 7 1.67 Yes 19 0.81 Yes -19 0.72 Yes 51 85.04 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 3172973 + NM_001302946 TRNT1 1 0.15 0.18 9 7.9 83.39 34 5.65 Yes 21 0.45 No 33 0.65 Yes -33 0.53 No 37 56.19 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 3178359 + NM_001302946 TRNT1 1 0.23 0.28 17 2.35 84.41 34 5.3 No 25 1.06 Yes 33 0.74 Yes -33 0.9 Yes 37 92.3 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 3178364 + NM_001302946 TRNT1 1 0.44 0.51 28 1.09 0 39 5.54 No 30 1.04 Yes 0 0 No -38 0.88 Yes 32 93.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 3181436 + NM_001302946 TRNT1 1 0.17 0.19 10 3.8 0 40 6.8 Yes 27 1.88 Yes 0 0 No -26 0.41 No 31 68.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 3184577 + NM_001302946 TRNT1 1 0.14 0.17 11 -2.45 75.11 49 10.11 Yes 55 0.63 No 0 0 No -30 0.55 No 22 83.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 3188099 + NM_001302946 TRNT1 1 1.81 1.94 60 -1.72 66.02 14 4.97 No 73 -3.05 No 27 0.4 Yes -24 0.34 No 46 25.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 49717679 + NM_005480 TROAP 1 0.13 0.13 7 5.24 79.12 29 6.34 Yes 74 1.78 Yes 0 0 No -28 0.72 Yes 42 69.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 49717994 + NM_005480 TROAP 1 3.04 0.86 36 6.65 86.77 23 5.1 No 75 1.85 Yes 22 0.94 Yes -22 0.73 Yes 48 81.13 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 49718013 + NM_005480 TROAP 1 1.43 0.42 24 6.8 86.61 18 5.27 No 68 0.6 No 21 0.51 Yes -21 0.62 No 49 77.15 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 49717937 + NM_005480 TROAP 1 26.09 7.58 72 5.55 68.23 31 7.87 Yes 18 1.87 Yes 30 0.92 Yes -30 0.96 Yes 40 94.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 49717949 + NM_005480 TROAP 1 0.4 0.11 7 1.1 0 17 4.58 No 30 1.86 Yes 0 0 No -42 0.82 Yes 48 69.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49717994 + NM_005480 TROAP 1 34.91 10.17 71 6.65 86.77 23 5.1 No 75 1.85 Yes 22 0.94 Yes -22 0.73 Yes 48 81.13 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 49718013 + NM_005480 TROAP 1 50.79 15.1 72 6.8 86.61 18 5.27 No 68 0.6 No 21 0.51 Yes -21 0.62 No 49 77.15 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 49721009 + NM_005480 TROAP 1 1.7 0.39 22 7.06 83.33 21 5.2 No NA NA NA 20 0.5 Yes -23 0.59 No 28 68.98 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 49722714 + NM_005480 TROAP 1 0.72 0.28 16 0.97 0 33 7.28 Yes 20 0.64 No 0 0 No -32 0.8 Yes 38 76.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 49723148 + NM_005480 TROAP 1 0.38 0.14 9 2.61 73.43 22 5.29 No 73 -5.45 No 20 0.9 Yes -21 0.83 Yes 49 79.42 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 49723645 + NM_005480 TROAP 1 1.32 0.29 16 -5.48 0 11 3.87 No 54 0.72 No 0 0 No -44 0.55 No 60 57.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 49724245 + NM_005480 TROAP 1 0.35 0.11 7 4.24 0 17 4.58 No 11 0.13 No 0 0 No -16 0.42 No 51 36.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 193031316 + NM_001042370 TROVE2 1 1.83 0.51 23 6.04 85 50 7.94 Yes 37 0.79 Yes 0 0 No -29 0.71 Yes 21 36.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 193033807 + NM_001042370 TROVE2 1 0.33 0.13 8 -5.07 0 49 7.44 Yes 33 1.07 Yes 0 0 No -48 0.73 Yes 22 87.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 193039683 + NM_001042370 TROVE2 1 5.83 11.4 72 1.78 71.57 28 8.07 Yes 15 1.06 Yes 27 0.86 Yes -27 0.8 Yes 43 55.72 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 193050497 + NM_001042370 TROVE2 1 0.2 0.31 15 3.4 0 26 6.77 Yes 13 0.86 Yes 0 0 No -25 0.37 No 45 50.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 193052713 + NM_001042370 TROVE2 1 0.15 0.19 10 4.58 82.74 22 5.09 No 9 0.15 No 0 0 No -21 0.94 Yes 49 94.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33591842 - NM_015638 TRPC4AP 1 0.14 0.22 13 3.16 75.73 28 5.66 Yes 63 1.47 Yes 0 0 No -27 0.93 Yes 43 89.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33591894 - NM_015638 TRPC4AP 1 0.18 0.28 17 10.01 78.82 24 5.48 No 11 1.52 Yes 0 0 No -23 0.79 Yes 47 86.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33592168 - NM_015638 TRPC4AP 1 0.12 0.21 11 8.25 81.71 26 5.39 No NA NA NA 0 0 No -25 0.83 Yes 45 84.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33593601 - NM_015638 TRPC4AP 1 0.1 0.14 10 2.28 0 15 3.87 No 65 1.01 Yes 0 0 No -24 0.79 Yes 46 77.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33595671 - NM_015638 TRPC4AP 1 0.54 0.61 28 7.18 81.56 19 5.62 Yes 6 0.44 No 0 0 No -30 0.53 No 40 68.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33596982 - NM_015638 TRPC4AP 1 0.59 0.83 36 8.67 81.02 23 4.75 No 10 1.22 Yes 0 0 No -22 0.8 Yes 48 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33597879 - NM_015638 TRPC4AP 1 0.11 0.17 11 9.69 84.36 33 6.24 Yes 71 0.57 No 0 0 No -24 0.8 Yes 46 86.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33598098 - NM_015638 TRPC4AP 1 0.07 0.11 7 -1.81 0 21 6.15 Yes 35 2.31 Yes 26 0.79 Yes -20 0.66 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 33600589 - NM_015638 TRPC4AP 1 0.24 0.4 24 7.01 75.01 23 4.77 No -2 1.32 Yes 0 0 No -27 0.78 Yes 47 47.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 33601962 - NM_015638 TRPC4AP 1 0.11 0.18 10 6.6 78.15 64 6.73 Yes 6 0.7 No 0 0 No -41 0.49 No 29 64.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 33609136 - NM_015638 TRPC4AP 1 32.52 22.17 72 11.62 91.56 27 5.69 Yes 42 1.15 Yes 0 0 No -26 0.82 Yes 44 81.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33613559 - NM_015638 TRPC4AP 1 0.24 0.18 9 8.39 94.53 19 7.16 Yes 6 0.42 No 0 0 No -28 0.87 Yes 42 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33632410 - NM_015638 TRPC4AP 1 0.05 0.11 7 8.35 82.59 34 6.99 Yes 21 0.41 No 0 0 No -33 0.85 Yes 37 94.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33637794 - NM_015638 TRPC4AP 1 0.41 0.47 23 0.03 0 37 8.87 Yes 24 0.59 No 0 0 No -36 0.93 Yes 34 97.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33642423 - NM_015638 TRPC4AP 1 0.27 0.29 16 7.46 83.32 37 6.71 Yes 43 1.14 Yes 0 0 No -36 0.65 No 34 75.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 33645365 - NM_015638 TRPC4AP 1 0.11 0.18 12 2.92 0 15 4.36 No 11 1.01 Yes 0 0 No -23 0.5 No 42 41.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 33656244 - NM_015638 TRPC4AP 1 0.12 0.21 13 8.83 91.61 27 5.48 No 51 0.54 No 0 0 No -29 0.69 Yes 41 68.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 33657163 - NM_015638 TRPC4AP 1 0.35 0.47 30 -12.29 0 33 4.76 No 75 0.5 No 0 0 No -32 0.34 No 15 38.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 50853959 - NM_017672 TRPM7 1 0.16 0.18 11 6.91 94.15 21 5.95 Yes 8 0.51 No 0 0 No -27 0.78 Yes 43 61.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 50861005 - NM_017672 TRPM7 1 1.01 1.38 48 8.57 88.27 28 7.68 Yes 15 1.57 Yes 0 0 No -27 0.94 Yes 43 96.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 50862365 - NM_017672 TRPM7 1 0.07 0.11 8 -1.19 0 27 6.54 Yes 14 0 No 29 0.32 Yes -27 0.41 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 50862873 - NM_017672 TRPM7 1 0.08 0.1 7 13.15 92.63 30 7.81 Yes 17 2.3 Yes 0 0 No -29 0.96 Yes 41 96.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 50866639 - NM_017672 TRPM7 1 0.22 0.22 13 3.03 84.72 31 6 Yes 41 0.78 Yes 0 0 No -30 0.64 No 40 80.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 50866642 - NM_017672 TRPM7 1 1.77 1.71 57 5.34 79.71 28 5.74 Yes 38 0.79 Yes 0 0 No -27 0.57 No 43 81.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 50867111 - NM_017672 TRPM7 1 0.13 0.21 11 8.43 93.21 25 4.75 No 28 0.06 No 0 0 No -24 0.62 No 46 57.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 50867111 - NM_017672 TRPM7 1 0.07 0.13 9 8.43 93.21 25 4.75 No 28 0.06 No 0 0 No -24 0.62 No 46 57.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 50869578 - NM_017672 TRPM7 1 0.34 0.43 21 8.02 82.84 19 7.07 Yes 6 1.16 Yes 0 0 No -27 0.52 No 43 69.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 50873140 - NM_017672 TRPM7 1 0.59 0.88 38 5.97 88.77 24 4.9 No 18 0.21 No 36 0.14 Yes -23 0.94 Yes 47 96.66 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 50875354 - NM_017672 TRPM7 1 50.76 58.07 72 6.78 93.46 16 6.15 Yes 3 0.38 No 22 0.5 Yes -34 0.54 No 36 59.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 50875354 - NM_017672 TRPM7 1 0.35 0.42 22 6.78 93.46 16 6.15 Yes 3 0.38 No 22 0.5 Yes -34 0.54 No 36 59.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 50880448 - NM_017672 TRPM7 1 10.23 11.29 72 5.73 76.33 34 4.57 No 60 0.67 No 0 0 No -22 0.64 No 48 77.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 50881514 - NM_017672 TRPM7 1 0.13 0.15 8 3.97 84.41 37 7.2 Yes 24 1.41 Yes 0 0 No -36 0.62 No 34 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 50881701 - NM_017672 TRPM7 1 0.24 0.26 13 5.01 76.76 18 4.57 No 69 0.43 No 0 0 No -25 0.49 No 45 55.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 50885478 - NM_017672 TRPM7 1 0.53 0.47 23 2.51 0 27 5.16 No 59 1.11 Yes 0 0 No -26 0.68 Yes 37 30.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 50891444 - NM_017672 TRPM7 1 2.97 2.93 70 5.13 73.46 24 5.81 Yes 59 0.78 Yes 0 0 No -23 0.87 Yes 47 85.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 50895950 - NM_017672 TRPM7 1 0.13 0.13 8 5.7 76.47 29 4.55 No 67 0.52 No 0 0 No -28 0.92 Yes 42 83.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 50905535 - NM_017672 TRPM7 1 0.22 0.24 14 5.2 85.02 18 6.32 Yes 5 1.23 Yes 0 0 No -25 0.61 No 45 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 50905692 - NM_017672 TRPM7 1 0.17 0.21 14 3.92 0 41 5.59 Yes 28 1.39 Yes 0 0 No -43 0.61 No 27 78.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 50905696 - NM_017672 TRPM7 1 0.14 0.17 10 2.3 84.41 37 5.38 No 24 1.41 Yes 0 0 No -39 0.56 No 31 79.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 50906037 - NM_017672 TRPM7 1 0.15 0.24 13 -4.66 81.26 21 4.89 No 8 0.58 No 0 0 No -20 0.85 Yes 50 93.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 50928173 - NM_017672 TRPM7 1 0.16 0.25 15 4.86 83 30 6.61 Yes 41 1.51 Yes 0 0 No -29 0.44 No 41 53.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 50942889 - NM_017672 TRPM7 1 0.66 0.68 36 2.94 83.28 31 6.63 Yes 18 1.6 Yes 0 0 No -30 0.95 Yes 40 92.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 50943672 - NM_017672 TRPM7 1 0.78 0.85 36 8.36 94.94 24 6.76 Yes 11 0.36 No 0 0 No -24 0.67 Yes 46 54.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 50957589 - NM_017672 TRPM7 1 0.29 0.38 21 10.08 88.27 25 6.13 Yes 48 0.75 No 0 0 No -24 0.57 No 46 57.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 50958836 - NM_017672 TRPM7 1 0.14 0.18 9 3.45 85.02 16 6.86 Yes 3 1.16 Yes 0 0 No -26 0.49 No 44 48.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 50958996 - NM_017672 TRPM7 1 2.74 3.6 48 -0.18 83.95 25 6.11 Yes 57 1.32 Yes 0 0 No -32 0.62 No 46 78.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 50967764 - NM_017672 TRPM7 1 0.69 0.94 33 7.98 90.21 22 6.56 Yes 75 -5.08 No 0 0 No -22 0.56 No 48 78.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 50976220 - NM_017672 TRPM7 1 0.34 0.42 23 -0.08 56.1 26 6.71 Yes 13 0.64 No 0 0 No -25 0.46 No 45 37.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 63991606 - NM_001160390 TRPT1 1 2.7 1.74 60 4.27 72.41 21 5.94 Yes 8 1.55 Yes 0 0 No -20 0.77 Yes 50 90.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 63991635 - NM_001160390 TRPT1 1 8.41 5.4 71 4.63 85.75 54 6.58 Yes 1 0.69 No 22 0.62 Yes -22 0.36 No 29 33.08 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 63991686 - NM_001160390 TRPT1 1 8.48 5.65 72 3.32 79.91 20 5.39 No 7 0.45 No 22 0.72 Yes -19 0.76 Yes 51 74.57 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 63991888 - NM_001160390 TRPT1 1 0.2 0.15 8 4.85 79.93 17 5.02 No 55 -0.52 No 0 0 No -20 0.77 Yes 50 64.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 63991906 - NM_001160390 TRPT1 1 0.2 0.11 7 -1.52 61.08 43 7.27 Yes 37 -0.54 No 0 0 No -40 0.81 Yes 30 64.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 63991964 - NM_001160390 TRPT1 1 0.23 0.17 10 10.75 91.19 16 4.56 No 36 0.41 No 29 0.68 Yes -25 0.53 No 41 59.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 63992411 - NM_001160390 TRPT1 1 0.27 0.14 9 6.96 78.97 37 6.4 Yes 40 0.98 Yes 0 0 No -32 0.39 No 34 63.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 63992804 - NM_001160390 TRPT1 1 0.2 0.1 7 6.55 80.17 23 5.19 No -2 -0.4 No 0 0 No -20 0.78 Yes 50 69.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 16322996 + NM_016113 TRPV2 1 0.11 0.22 13 6.95 86.5 17 5.67 Yes 41 -2.67 No 0 0 No -24 0.27 No 55 53.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 16329349 + NM_016113 TRPV2 1 0.12 0.19 13 2.62 77.71 20 5.1 No 7 0.8 Yes 0 0 No -19 0.78 Yes 51 88.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16330765 + NM_016113 TRPV2 1 0.11 0.14 9 5.59 88.61 22 4.14 No 64 1.09 Yes 18 0.93 Yes -21 0.96 Yes 49 97.66 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 16330765 + NM_016113 TRPV2 1 27.62 38.15 72 5.59 88.61 22 4.14 No 64 1.09 Yes 18 0.93 Yes -21 0.96 Yes 49 97.66 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 16331097 + NM_016113 TRPV2 1 0.09 0.15 11 6.62 82.21 13 5.39 No 62 0.44 No 0 0 No -26 0.6 No 48 69.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 16331102 + NM_016113 TRPV2 1 0.08 0.15 10 -1.82 0 18 5.83 Yes 67 0.44 No 0 0 No -31 0.54 No 43 62.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 16332164 + NM_016113 TRPV2 1 0.06 0.14 9 2.23 0 16 4.47 No 3 0.18 No 0 0 No -15 0.83 Yes 55 83.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 16332513 + NM_016113 TRPV2 1 0.61 0.96 40 8.75 87.82 24 6.36 Yes 36 -1.66 No 0 0 No -24 0.43 No 44 39.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 16334794 + NM_016113 TRPV2 1 0.05 0.1 7 5.2 85.02 18 6.86 Yes 5 1.23 Yes 0 0 No -26 0.8 Yes 44 88.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16334797 + NM_016113 TRPV2 1 0.24 0.44 23 3.79 80.12 21 7.07 Yes 8 1.2 Yes 0 0 No -29 0.57 No 41 77.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 16336891 + NM_016113 TRPV2 1 0.18 0.17 9 -1.05 0 24 6.71 Yes 11 1.67 Yes 0 0 No -23 0.85 Yes 47 89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 16340194 + NM_016113 TRPV2 1 0.19 0.28 16 1.87 0 12 4.24 No 35 -2.02 No 0 0 No -32 0.9 Yes 38 49.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 16340082 + NM_016113 TRPV2 1 0.09 0.13 8 -7.02 0 9 3.19 No 62 1.03 Yes 22 0.76 Yes -61 0.44 No 62 30.7 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 98492257 + NM_003496 TRRAP 1 0.21 0.18 10 11.21 87.15 47 8.47 Yes 34 1.65 Yes 0 0 No -46 0.71 Yes 24 79.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98506435 + NM_003496 TRRAP 1 0.76 0.79 40 8.19 80.58 25 5.24 No 12 1.23 Yes 0 0 No -24 0.93 Yes 46 91.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98508135 + NM_003496 TRRAP 1 4.43 4.26 70 2.45 76.55 29 5.9 Yes 16 0.68 No 25 0.82 Yes -28 0.61 No 42 70.27 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 98524797 + NM_003496 TRRAP 1 0.12 0.13 7 3.88 0 11 4.12 No 10 1.04 Yes 0 0 No -22 0.58 No 48 73.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 98526415 + NM_003496 TRRAP 1 0.83 0.83 34 11.11 86.13 26 9.85 Yes 13 0.65 No 0 0 No -25 0.76 Yes 45 69.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 98526581 + NM_003496 TRRAP 1 0.13 0.13 8 9.5 95.65 20 6.91 Yes 7 1.41 Yes 0 0 No -19 0.75 Yes 51 84.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98543369 + NM_003496 TRRAP 1 3.81 3.24 69 9.83 84.92 21 5.66 Yes 71 1.74 Yes 20 0.19 Yes -30 0.38 No 47 33.03 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 98547689 + NM_003496 TRRAP 1 0.8 0.65 34 1.11 71.43 31 6.41 Yes 18 1.63 Yes 0 0 No -30 0.71 Yes 40 80.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98558886 + NM_003496 TRRAP 1 0.67 0.49 23 -11.74 62.21 28 5.83 Yes 34 0.78 Yes 0 0 No -27 0.63 No 43 74.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 98560391 + NM_003496 TRRAP 1 0.25 0.28 12 6.75 83.77 32 6.85 Yes -4 0.16 No 0 0 No -34 0.67 Yes 36 67.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 98563315 + NM_003496 TRRAP 1 0.22 0.14 7 -1.85 57.36 35 6.24 Yes 34 -2.2 No 30 0.25 Yes -32 0.45 No 59 55.8 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 98574564 + NM_003496 TRRAP 1 0.21 0.14 9 -9.33 75.1 19 5.43 No 59 0.55 No 0 0 No -27 0.93 Yes 43 92.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 98574966 + NM_003496 TRRAP 1 0.22 0.19 9 3.8 82.77 17 5.29 No 4 1.37 Yes 0 0 No -21 0.59 No 54 76.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 98580862 + NM_003496 TRRAP 1 0.22 0.19 11 8.05 76.35 61 7.25 Yes 11 0.61 No 31 0.54 Yes -23 0.67 Yes 47 61.77 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 98580862 + NM_003496 TRRAP 1 1.91 1.64 59 8.05 76.35 61 7.25 Yes 11 0.61 No 31 0.54 Yes -23 0.67 Yes 47 61.77 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 98588123 + NM_003496 TRRAP 1 0.16 0.13 9 3.24 69.84 19 5.15 No 66 0.13 No 0 0 No -24 0.59 No 52 80.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 98589756 + NM_003496 TRRAP 1 0.17 0.21 13 -2.23 75 17 5.95 Yes 74 1.01 Yes 22 0.51 Yes -26 0.62 No 44 68.8 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 98590798 + NM_003496 TRRAP 1 0.71 0.14 9 5.57 77.77 29 5.91 Yes 70 1.35 Yes 0 0 No -28 0.79 Yes 42 75.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 98591160 + NM_003496 TRRAP 1 252.24 58.33 72 8.95 85.39 29 7.94 Yes 16 1.79 Yes 28 0.92 Yes -28 0.89 Yes 42 92.64 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 98598154 + NM_003496 TRRAP 1 0.18 0.11 8 10.89 96.9 23 5.98 Yes -2 -0.61 No 0 0 No -30 0.58 No 41 62.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 116719486 + NM_139169 TRUB1 1 0.19 0.19 11 -1.08 76.02 38 6.84 Yes 25 1.81 Yes 0 0 No -37 0.81 Yes 33 96.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 116731909 + NM_139169 TRUB1 1 1.42 0.92 42 0.98 74.43 22 5 No 52 1.35 Yes 0 0 No -21 0.86 Yes 49 61.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 116731913 + NM_139169 TRUB1 1 0.16 0.1 7 -3.87 0 26 5.39 No 56 1.34 Yes 0 0 No -25 0.9 Yes 45 22.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 131073642 - NM_001329861 TRUB2 1 0.08 0.17 11 7.17 84.47 22 5.26 No 55 -2.3 No 29 0.46 Yes -21 0.79 Yes 49 77.56 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 135778171 - NM_000368 TSC1 1 0.44 0.15 11 -1.41 0 25 3.93 No 12 0.97 Yes 0 0 No -27 0.49 No 38 49.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 135779190 - NM_000368 TSC1 1 1.15 0.43 21 8.68 87.49 24 4.67 No 42 0.58 No 0 0 No -23 0.8 Yes 47 86.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 135782243 - NM_000368 TSC1 1 0.33 0.13 7 6.39 89.06 33 5.93 Yes 35 0.3 No 27 0.86 Yes -32 0.76 Yes 38 72.99 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 135786077 - NM_000368 TSC1 1 32.27 11.75 72 9.28 88.46 30 6.12 Yes 17 0.36 No 0 0 No -29 0.91 Yes 41 92.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 135786077 - NM_000368 TSC1 1 0.39 0.14 9 9.28 88.46 30 6.12 Yes 17 0.36 No 0 0 No -29 0.91 Yes 41 92.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 135798247 - NM_000368 TSC1 1 0.36 0.21 11 10.87 85.96 36 5.98 Yes 40 0.67 No 0 0 No -29 0.62 No 41 79.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 135800294 - NM_000368 TSC1 1 1.57 0.67 34 3.98 0 17 4.57 No 39 1.35 Yes 0 0 No -21 0.54 No 49 79.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 135800306 - NM_000368 TSC1 1 0.76 0.31 19 0.53 57.34 26 5.26 No 27 1.35 Yes 0 0 No -25 0.88 Yes 45 89.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135806815 - NM_000368 TSC1 1 2.14 1.06 49 10.3 72.74 12 6.49 Yes -1 1.59 Yes 0 0 No -25 0.52 No 45 45.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 135809928 - NM_000368 TSC1 1 0.9 0.44 21 4.41 74.09 23 8.14 Yes 10 0.43 No 0 0 No -22 0.71 Yes 48 63.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 135819094 - NM_000368 TSC1 1 0.84 0.22 14 6.1 87.12 24 5.1 No 17 1.11 Yes 0 0 No -23 0.8 Yes 47 79.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2103281 + NM_001318829 TSC2 1 0.17 0.14 9 2.3 71.68 50 7.26 Yes 41 0.85 Yes 0 0 No -49 0.84 Yes 21 82.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2105980 + NM_001318829 TSC2 1 0.17 0.11 8 8.12 81.48 33 6.98 Yes 20 1.18 Yes 0 0 No -32 0.83 Yes 38 88.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2105980 + NM_001318829 TSC2 1 1.15 0.76 35 8.12 81.48 33 6.98 Yes 20 1.18 Yes 0 0 No -32 0.83 Yes 38 88.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2106656 + NM_001318829 TSC2 1 0.56 0.44 26 7.86 0 18 4.57 No 21 0.72 No 0 0 No -33 0.81 Yes 37 72.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2110726 + NM_001318829 TSC2 1 0.53 0.31 18 8.12 84.6 23 5.38 No 75 1.06 Yes 0 0 No -25 0.75 Yes 45 72.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2110953 + NM_001318829 TSC2 1 1.97 1.36 55 6.39 75.4 28 5.83 Yes -4 0.15 No 0 0 No -29 0.53 No 45 39.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2111802 + NM_001318829 TSC2 1 0.77 0.53 28 3.15 61.16 29 5.92 Yes 16 0.38 No 0 0 No -28 0.85 Yes 42 82.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2112529 + NM_001318829 TSC2 1 0.21 0.14 8 6.26 79.4 37 6.16 Yes 5 1.23 Yes 0 0 No -36 0.7 Yes 34 74.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2118558 + NM_001318829 TSC2 1 0.15 0.1 7 9.23 88.94 42 6.46 Yes 29 0.67 No 21 0.48 Yes -35 0.44 No 35 54.61 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 2121840 + NM_001318829 TSC2 1 0.56 0.28 15 13.53 91.28 26 5.66 Yes 67 1.09 Yes 0 0 No -25 0.68 Yes 45 66.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2122201 + NM_001318829 TSC2 1 0.87 0.32 20 11 83.01 29 5.29 No 16 0.22 No 19 0.86 Yes -21 0.75 Yes 49 82.86 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 2127598 + NM_001318829 TSC2 1 2.26 0.71 33 6.23 72.94 10 7.14 Yes 65 1.71 Yes 27 0.04 Yes -9 0.23 No 41 49.82 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 2129035 + NM_001318829 TSC2 1 124.29 39.01 72 7.87 88.24 30 8.17 Yes 17 1.68 Yes 26 0.93 Yes -29 0.82 Yes 41 77.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 2130509 + NM_001318829 TSC2 1 0.2 0.11 8 2.47 0 25 7.87 Yes 12 1.49 Yes 0 0 No -24 0.86 Yes 46 82.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 2131672 + NM_001318829 TSC2 1 0.56 0.31 18 6.76 84.99 40 6.78 Yes 27 1.45 Yes 0 0 No -39 0.74 Yes 31 45.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 2132436 + NM_001318829 TSC2 1 1.21 0.71 34 9.01 85.14 30 7.28 Yes 17 1.25 Yes 29 0.96 Yes -29 0.8 Yes 41 93.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 2134566 + NM_001318829 TSC2 1 0.48 0.26 15 7.01 85.45 20 5.05 No 72 -4.37 No 0 0 No -25 0.72 Yes 46 66.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 2136240 + NM_001318829 TSC2 1 0.34 0.18 13 4.86 85.84 17 4.71 No 66 1.29 Yes 0 0 No -20 0.5 No 51 49.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 2136767 + NM_001318829 TSC2 1 0.24 0.19 12 2.05 69.94 44 6.61 Yes 31 1.42 Yes 37 0.61 Yes -43 0.55 No 27 58.67 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 150130399 + NR_130136 TSC22D2 1 4.53 0.38 19 7.59 90.97 26 4.57 No 46 2.02 Yes 0 0 No -25 0.52 No 45 74.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 100064861 - NR_130119 TSC22D4 1 0.53 0.89 33 5.07 80.8 90 10.14 Yes 23 0.2 No 26 0.6 Yes -26 0.61 No 35 78.69 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 100065221 - NR_130119 TSC22D4 1 0.27 0.44 22 -2.24 0 24 7.21 Yes 11 2.05 Yes 0 0 No -23 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 100065318 - NR_130119 TSC22D4 1 0.12 0.22 15 8.13 89.04 35 7.15 Yes 5 1.19 Yes 0 0 No -37 0.36 No 33 45.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 100069360 - NR_130119 TSC22D4 1 0.09 0.14 7 12.58 87.72 28 4.09 No 36 0.66 No 0 0 No -40 0.5 No 30 61.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100072038 - NR_130119 TSC22D4 1 0.2 0.33 16 6.04 77.55 14 5.91 Yes 1 1.01 Yes 0 0 No -56 0.45 No 42 37.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 100075086 - NR_130119 TSC22D4 1 36.66 3.46 67 6.7 80.2 23 5.92 Yes 66 -2.08 No 25 0.53 Yes -22 0.55 No 48 56.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 100075434 - NR_130119 TSC22D4 1 2.44 0.28 14 1.25 59.57 41 8.02 Yes NA NA NA 0 0 No -37 0.5 No 30 50.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 100075825 - NR_130119 TSC22D4 1 92.41 7.31 72 8.12 84.83 35 8.6 Yes -3 1.05 Yes 0 0 No -34 0.4 No 36 74.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 100075828 - NR_130119 TSC22D4 1 163.73 13.01 72 6.35 78.53 32 8.43 Yes 67 -0.45 No 0 0 No -30 0.4 No 39 75.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 100075931 - NR_130119 TSC22D4 1 874.23 64.04 72 11.08 86.65 103 10.68 Yes NA NA NA 28 0.07 Yes -47 0.43 No 23 59.18 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 12540979 + NM_001145394 TSEN2 1 0.33 0.18 11 1.78 70.72 25 5.2 No 12 0.09 No 0 0 No -24 0.82 Yes 46 93.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 12543166 + NM_001145394 TSEN2 1 1.57 0.67 29 7.37 90.65 58 8 Yes 53 1.09 Yes 0 0 No -27 0.53 No 43 52.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 12548206 + NM_001145394 TSEN2 1 3.74 0.63 29 4.32 71.26 30 4.64 No 38 1.79 Yes 0 0 No -29 0.95 Yes 41 94.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 12548238 + NM_001145394 TSEN2 1 1.13 0.19 12 8.58 78.03 31 5.66 Yes 70 1.78 Yes 0 0 No -29 0.74 Yes 41 75.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 12571314 + NM_001145394 TSEN2 1 0.91 0.21 14 7.89 88.44 17 4.69 No 66 1.14 Yes 0 0 No -25 0.64 No 45 74.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 12572353 + NM_001145394 TSEN2 1 1.27 0.42 21 6.43 76.27 33 9.39 Yes 56 0.64 No 0 0 No -32 0.41 No 38 82.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 73513067 + NM_207346 TSEN54 1 0.72 0.1 7 -0.26 66.14 38 6.63 Yes 61 -4.67 No 28 0.96 Yes -37 0.32 No 64 21.87 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 73513682 + NM_207346 TSEN54 1 0.61 0.25 14 9.05 86.68 23 5 No 54 0.52 No 0 0 No -28 0.62 No 48 59.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73515083 + NM_207346 TSEN54 1 0.41 0.18 11 0.45 0 11 4.12 No 24 1.41 Yes 28 0.89 Yes -36 0.86 Yes 34 73.81 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73515835 + NM_207346 TSEN54 1 0.4 0.18 12 7.52 85.23 27 7.62 Yes 14 1.47 Yes 0 0 No -26 0.94 Yes 44 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 58177397 + NM_001172696 TSFM 1 0.81 0.97 36 10.93 95.65 28 5.39 No 15 1.6 Yes 0 0 No -27 0.78 Yes 43 92.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 18503010 - NM_006292 TSG101 1 0.48 1.29 51 8.81 93.27 36 6 Yes 55 0.19 No 0 0 No -19 0.54 No 51 58.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 18512642 - NM_006292 TSG101 1 0.43 1.14 45 3.33 78.22 49 7.33 Yes 64 0.56 No 24 0.56 Yes -24 0.64 No 36 35.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 18531801 - NM_006292 TSG101 1 0.14 0.25 12 3.8 80.12 20 7.1 Yes 7 1.16 Yes 0 0 No -19 0.57 No 51 70.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 18534150 - NM_006292 TSG101 1 0.25 0.5 24 2.92 67.99 37 6.08 Yes 72 1.88 Yes 0 0 No -32 0.58 No 38 58.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 18537710 - NM_006292 TSG101 1 0.06 0.15 10 -20.61 0 32 4.77 No 68 1.18 Yes 0 0 No -31 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 18537711 - NM_006292 TSG101 1 0.06 0.13 8 -7.94 0 31 4.72 No 67 1.18 Yes 0 0 No -30 0.81 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 18547244 - NM_006292 TSG101 1 0.11 0.15 9 -0.1 0 15 3.87 No 46 0.71 No 0 0 No -25 0.69 Yes 45 68.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 18547250 - NM_006292 TSG101 1 2.41 3.49 71 4.44 78.38 41 5.97 Yes 40 0.73 No 19 0.3 Yes -40 0.52 No 51 57.71 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 99735150 - NM_182911 TSGA10 1 8.28 0.85 36 10.15 88.85 21 7.51 Yes 71 2.09 Yes 20 0.79 Yes -30 0.61 No 40 60 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 99735265 - NM_182911 TSGA10 1 2.8 0.22 13 4.02 78.59 27 7.3 Yes 49 1.1 Yes 27 0.86 Yes -27 0.5 No 43 68.14 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 99736915 - NM_182911 TSGA10 1 1.77 0.15 10 4.83 82.15 20 4.04 No 7 1.03 Yes 0 0 No -30 0.85 Yes 40 75.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 99741415 - NM_182911 TSGA10 1 0.8 0.1 7 5.22 70.73 42 6.78 Yes 29 0.44 No 0 0 No -41 0.49 No 29 74.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 143396451 - NM_145003 TSNARE1 1 23.46 1.36 50 4.79 89.56 23 5.39 No NA NA NA 19 0.35 Yes -22 0.69 Yes 49 79.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 143396451 - NM_145003 TSNARE1 1 3.1 0.21 14 4.79 89.56 23 5.39 No NA NA NA 19 0.35 Yes -22 0.69 Yes 49 79.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 143447379 - NM_145003 TSNARE1 1 6.08 0.24 12 6.76 87.52 22 4.59 No 75 -3.95 No 25 0.48 Yes -25 0.78 Yes 45 66.9 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 231666888 + NR_028399 TSNAX-DISC1 1 0.59 1.1 48 7.83 80.84 23 6.95 Yes 10 1.15 Yes 0 0 No -22 0.71 Yes 48 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 231678778 + NR_028399 TSNAX-DISC1 1 0.11 0.24 11 -3.46 51.75 18 5.82 Yes 54 -5.1 No 0 0 No -22 0.79 Yes 48 59.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 231690366 + NR_028399 TSNAX-DISC1 1 0.54 1.21 47 6.78 77.26 24 6.22 Yes 2 0.14 No 23 0.46 Yes -23 0.7 Yes 47 48.72 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 120454302 - NM_012338 TSPAN12 1 2.95 1.44 43 10.15 91.34 19 5.48 No 40 -3.42 No 25 0.4 Yes -21 0.43 No 54 64.31 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 120482813 - NM_012338 TSPAN12 1 0.63 0.5 23 7.81 93.78 30 6.67 Yes 68 0.86 Yes 0 0 No -29 0.77 Yes 41 63.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 120495436 - NM_012338 TSPAN12 1 29.22 22.49 68 7.03 86.02 31 6.02 Yes 39 0.69 No 0 0 No -30 0.69 Yes 40 84.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 82222843 + NM_001128309 TSPAN14 1 10.18 0.97 40 7.41 94.87 21 5.2 No 76 -1.01 No 20 0.65 Yes -20 0.88 Yes 50 89.46 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 82228302 + NM_001128309 TSPAN14 1 49.24 4.5 67 7.13 81.19 37 6.66 Yes 24 1.09 Yes 26 0.82 Yes -27 0.8 Yes 44 63.6 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 82228337 + NM_001128309 TSPAN14 1 1.73 0.14 8 3.52 0 17 4.58 No 59 1.08 Yes 0 0 No -20 0.6 No 50 80.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 82272474 + NM_001128309 TSPAN14 1 1.7 0.54 19 2.42 0 40 7.21 Yes 51 0.85 Yes 0 0 No -39 0.67 Yes 31 63.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 176079812 + NM_012171 TSPAN17 1 0.41 0.18 10 7.97 85.1 28 5.66 Yes 36 1.1 Yes 28 0.74 Yes -28 0.68 Yes 45 65.93 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 176078776 + NM_012171 TSPAN17 1 0.6 0.19 13 5.44 71.8 11 5.57 Yes 44 0.17 No 0 0 No -32 0.34 No 44 39.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 176079779 + NM_012171 TSPAN17 1 0.22 0.11 8 -1.27 79.1 16 6.71 Yes 3 1.14 Yes 25 0.11 Yes -25 0.44 No 27 49.72 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 176079812 + NM_012171 TSPAN17 1 2.5 1.19 46 7.97 85.1 28 5.66 Yes 36 1.1 Yes 28 0.74 Yes -28 0.68 Yes 45 65.93 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 77344024 - NM_001168412 TSPAN3 1 0.11 0.17 11 11.47 95.65 29 6.35 Yes 16 1.59 Yes 0 0 No -28 0.85 Yes 42 93.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 77344283 - NM_001168412 TSPAN3 1 0.07 0.11 7 11.84 93.44 26 5.66 Yes 41 0.25 No 0 0 No -25 0.49 No 45 75.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 58140132 + NM_001330169 TSPAN31 1 0.23 0.14 8 3.48 65.53 24 5.48 No 29 1.03 Yes 23 0.87 Yes -42 0.4 No 47 52.63 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 58140143 + NM_001330169 TSPAN31 1 0.23 0.19 11 0.91 0 15 3.87 No 40 1.02 Yes 0 0 No -53 0.52 No 18 54.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 58140375 + NM_001330169 TSPAN31 1 0.33 0.26 14 3.79 0 30 5.9 Yes 17 0.32 No 26 0.88 Yes -30 0.84 Yes 40 89.59 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 128785707 + NM_178562 TSPAN33 1 0.1 0.17 9 8.75 89.27 24 5.18 No 11 0.28 No 0 0 No -23 0.73 Yes 47 76.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 128802237 + NM_178562 TSPAN33 1 2.47 7.6 72 -0.67 76.3 24 5.26 No 11 0.51 No 0 0 No -23 0.85 Yes 47 75.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 128802240 + NM_178562 TSPAN33 1 0.05 0.15 11 -3.91 0 9 3.87 No 14 0.53 No 0 0 No -26 0.84 Yes 44 75.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 128802709 + NM_178562 TSPAN33 1 0.05 0.21 11 9.11 87.39 22 6.7 Yes 9 1.85 Yes 0 0 No -21 0.83 Yes 49 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128804868 + NM_178562 TSPAN33 1 0.05 0.38 20 4.47 75.38 69 5.44 No 6 0.19 No 0 0 No -28 0.49 No 42 78.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 128806241 + NM_178562 TSPAN33 1 0.07 0.5 22 8.32 84.65 34 6.24 Yes 34 0.77 No 0 0 No -33 0.83 Yes 37 81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 128806619 + NM_178562 TSPAN33 1 0.02 0.13 7 -14.06 0 25 5.87 Yes 19 0.78 Yes 0 0 No -25 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 128806623 + NM_178562 TSPAN33 1 0.13 0.96 46 1.46 0 29 6.11 Yes 23 0.78 Yes 0 0 No -29 0.72 Yes 41 70.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 128807243 + NM_178562 TSPAN33 1 0.38 2.21 62 2.17 0 19 3.87 No 6 0.22 No 0 0 No -29 0.54 No 41 74.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 53113693 + NM_022117 TSPYL2 1 0.42 0.13 7 4.32 67.07 45 6.55 Yes 49 1.5 Yes 29 0.72 Yes -44 0.94 Yes 26 96.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 53113713 + NM_022117 TSPYL2 1 5.96 1.97 60 -3 0 30 5.18 No 69 1.5 Yes 29 0.72 Yes -10 0.49 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 53114800 + NM_022117 TSPYL2 1 0.34 0.13 9 -2.52 0 9 3.86 No 71 0.49 No 20 0.95 Yes -33 0.4 No 37 39.89 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 54470449 + NM_001346791 TSR2 1 0.9 1.85 58 -11.08 0 18 4.24 No 13 0.13 No 0 0 No -34 0.45 No 36 44.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1400227 - NM_001001410 TSR3 1 1.01 2.1 57 0.25 0 12 4.24 No 7 0.01 No 0 0 No -19 0.67 Yes 51 88.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 1400998 - NM_001001410 TSR3 1 0.1 0.17 9 0.39 0 31 5.56 Yes 18 1.17 Yes 0 0 No -25 0.7 Yes 45 83.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 3197934 - NM_001330530 TSSC1 1 0.3 0.38 23 5.48 0 48 7.95 Yes 35 2.1 Yes 0 0 No -36 0.56 No 34 73.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 3212729 - NM_001330530 TSSC1 1 0.23 0.35 18 7.98 79.48 30 5.37 No 58 0.59 No 24 0.51 Yes -27 0.67 Yes 43 77.73 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 3217941 - NM_001330530 TSSC1 1 0.21 0.14 9 6.72 82.01 30 6.15 Yes 14 1 Yes 29 0.8 Yes -29 0.58 No 41 74.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 3237572 - NM_001330530 TSSC1 1 0.31 0.22 14 5.12 78.77 35 6.67 Yes 67 1.3 Yes 0 0 No -34 0.73 Yes 36 83.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 3237572 - NM_001330530 TSSC1 1 0.43 0.32 20 5.12 78.77 35 6.67 Yes 67 1.3 Yes 0 0 No -34 0.73 Yes 36 83.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 3357020 - NM_001330530 TSSC1 1 0.35 0.51 33 4.52 87.57 22 4.57 No 76 0.4 No 0 0 No -21 0.85 Yes 49 71.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 3357033 - NM_001330530 TSSC1 1 0.12 0.18 10 0.02 0 20 4.58 No 63 0.4 No 0 0 No -19 0.9 Yes 51 81.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 3357095 - NM_001330530 TSSC1 1 0.27 0.44 24 6.74 75.06 14 5.65 Yes 1 0.49 No 27 0.56 Yes -20 0.68 Yes 50 63.47 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 3359825 - NM_001330530 TSSC1 1 0.34 0.5 25 7.99 85.47 24 5.98 Yes 11 1.1 Yes 0 0 No -23 0.8 Yes 47 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 3360103 - NM_001330530 TSSC1 1 0.27 0.38 22 11.17 95.97 16 5.2 No 54 -3.29 No 0 0 No -20 0.6 No 50 70.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 3360135 - NM_001330530 TSSC1 1 0.34 0.54 21 0.98 84.4 22 4.8 No 66 0.77 No 0 0 No -21 0.95 Yes 49 92.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 3372792 - NM_001330530 TSSC1 1 0.3 0.46 26 7.61 85.93 29 5.47 No 22 0.24 No 0 0 No -34 0.63 No 44 50.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 37412809 - NM_003312 TST 1 0.35 0.17 9 8.46 82.77 31 6.62 Yes 74 0.03 No 0 0 No -28 0.51 No 40 59.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 144695092 - NM_003313 TSTA3 1 0.08 0.11 8 0.11 68.36 40 6.48 Yes 50 1.87 Yes 0 0 No -14 0.46 No 59 20.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 144695128 - NM_003313 TSTA3 1 0.15 0.19 14 -4.84 0 18 4.11 No 14 1.87 Yes 0 0 No -26 0.87 Yes 44 44.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 144696842 - NM_003313 TSTA3 1 0.1 0.15 10 5.19 77.32 20 4.22 No NA NA NA 22 0.68 Yes -20 0.62 No 50 37.95 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 144698611 - NM_003313 TSTA3 1 0.1 0.14 9 10.18 89.72 34 5.92 Yes 21 1.31 Yes 28 0.54 Yes -33 0.93 Yes 37 93.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 144698825 - NM_003313 TSTA3 1 0.22 0.11 7 1.37 74.2 23 5.2 No 61 -4.98 No 0 0 No -22 0.78 Yes 48 76.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 161008425 - NM_001113206 TSTD1 1 16.09 4.29 69 4.66 75.01 19 6.8 Yes -4 1.36 Yes 0 0 No -22 0.6 No 29 35.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 161008464 - NM_001113206 TSTD1 1 185.85 50.03 72 7.88 78.02 25 5.48 No 34 1.16 Yes 24 0.91 Yes -24 0.74 Yes 46 68.01 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 161008485 - NM_001113206 TSTD1 1 6.5 1.79 55 5.29 80.89 26 5.1 No 13 1.16 Yes 25 0.85 Yes -25 0.81 Yes 45 73.04 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 100366272 - NM_139246 TSTD2 1 1.23 0.4 23 7.52 79.16 16 5.78 Yes 62 0.62 No 0 0 No -33 0.62 No 37 81.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 100368759 - NM_139246 TSTD2 1 0.64 0.28 16 7.78 81.74 32 5.57 Yes 19 0.85 Yes 0 0 No -27 0.36 No 39 57.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 100373405 - NM_139246 TSTD2 1 0.33 0.19 10 11.16 89.25 20 7.39 Yes 7 0.36 No 19 0.4 Yes -19 0.41 No 51 51.45 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 100388060 - NM_139246 TSTD2 1 2.12 0.75 37 6.92 91.79 21 4.79 No 69 1.15 Yes 22 0.9 Yes -20 0.83 Yes 50 80.2 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 100388252 - NM_139246 TSTD2 1 2.18 0.72 35 -0.8 60.53 36 6.08 Yes 23 0.84 Yes 0 0 No -35 0.89 Yes 35 92.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 100389845 - NM_139246 TSTD2 1 0.74 0.31 17 3.08 63.93 37 4.6 No 24 0.44 No 0 0 No -36 0.57 No 34 56.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99969590 + NM_001195131 TSTD3 1 44.8 2.82 65 6.3 84.95 42 6.56 Yes 29 0.35 No 0 0 No -41 0.86 Yes 29 89.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 43106053 - NM_173500 TTBK2 1 1.83 0.28 15 6.59 85.05 27 7.3 Yes 14 0.66 No 0 0 No -26 0.66 No 44 77.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 43122558 - NM_173500 TTBK2 1 0.51 0.13 9 4.05 64.36 37 6.96 Yes 24 1.1 Yes 0 0 No -24 0.27 No 38 39.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43130378 - NM_173500 TTBK2 1 0.44 0.1 7 4.65 84.17 27 5.2 No 22 -1.18 No 0 0 No -26 0.55 No 21 63.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 43130398 - NM_173500 TTBK2 1 0.6 0.15 9 1.22 0 30 6.85 Yes 68 0.71 No 0 0 No -29 0.8 Yes 41 80.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 43142566 - NM_173500 TTBK2 1 1.02 0.14 8 10 93.23 19 4.23 No 22 0.43 No 0 0 No -30 0.46 No 41 65.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 43147399 - NM_173500 TTBK2 1 8.27 0.97 43 4.97 75.58 82 8.53 Yes 25 0.07 No 27 0.67 Yes -18 0.45 No 52 80.53 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 43163816 - NM_173500 TTBK2 1 2.35 0.28 15 3.73 81.05 21 5.2 No 38 2.56 Yes 0 0 No -50 0.85 Yes 20 91.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43163834 - NM_173500 TTBK2 1 1.28 0.17 7 -5.57 75.62 33 7.32 Yes 20 2.58 Yes 0 0 No -32 0.89 Yes 38 92.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43164876 - NM_173500 TTBK2 1 3.29 0.18 10 1.23 75.09 25 5.29 No 66 -5.43 No 24 0.96 Yes -24 0.97 Yes 46 83.13 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 43164895 - NM_173500 TTBK2 1 7.88 0.57 33 3.99 75.6 26 6.32 Yes 47 -4.23 No 25 0.8 Yes -25 0.84 Yes 45 66.42 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 159445895 + NM_003314 TTC1 1 0.16 0.33 19 4.27 71.73 20 4.85 No 75 -5.98 No 0 0 No -33 0.72 Yes 37 71.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 159450603 + NM_003314 TTC1 1 0.08 0.18 12 10.63 89.66 25 5.52 No 12 1.57 Yes 0 0 No -24 0.74 Yes 46 84.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 159492283 + NM_003314 TTC1 1 0.09 0.21 13 8.95 84.37 20 5.71 Yes 7 0.92 Yes 28 0.73 Yes -28 0.71 Yes 42 65.99 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 159478137 + NM_003314 TTC1 1 0.07 0.19 10 0.78 80.58 65 7.99 Yes 20 0.15 No 0 0 No -29 0.48 No 42 69.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 159492283 + NM_003314 TTC1 1 0.69 1.72 61 8.95 84.37 20 5.71 Yes 7 0.92 Yes 28 0.73 Yes -28 0.71 Yes 42 65.99 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 113186672 + NM_017868 TTC12 1 1.98 0.22 11 9.29 83.84 29 7.65 Yes 16 0.57 No 28 0.83 Yes -28 0.93 Yes 42 92.07 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 113200115 + NM_017868 TTC12 1 1.24 0.14 8 11.84 80.99 28 5.83 Yes 15 0.44 No 0 0 No -27 0.67 Yes 43 84.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 113200363 + NM_017868 TTC12 1 5.14 0.63 30 9.15 84.7 33 7.85 Yes 20 0.93 Yes 32 0.83 Yes -32 0.91 Yes 38 96.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 113209313 + NM_017868 TTC12 1 0.84 0.21 14 8.14 78.6 30 7.64 Yes 6 0.71 No 0 0 No -29 0.78 Yes 41 93.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 113222794 + NM_017868 TTC12 1 1.23 0.17 12 0.06 77.62 34 6.27 Yes 21 1.09 Yes 0 0 No -33 0.9 Yes 37 91.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 113235342 + NM_017868 TTC12 1 2.89 0.24 12 6.65 69.32 31 6.58 Yes 40 1.43 Yes 0 0 No -30 0.74 Yes 40 76.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 231052046 - NM_024525 TTC13 1 37.45 12.01 72 2.83 72.35 30 6.25 Yes 17 1.36 Yes 26 0.82 Yes -29 0.84 Yes 41 63.2 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 231063918 - NM_024525 TTC13 1 3.74 1.26 42 1.92 62.5 38 7.95 Yes 54 0.68 No 0 0 No -26 0.49 No 33 38.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 231067622 - NM_024525 TTC13 1 1.33 0.49 27 -5.96 68.59 61 6.41 Yes 9 0.69 No 0 0 No -24 0.58 No 35 45.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 231072011 - NM_024525 TTC13 1 18.44 3.15 67 7.1 83.01 65 5.6 Yes 22 0.27 No 26 0.73 Yes -26 0.44 No 49 52.16 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 231084727 - NM_024525 TTC13 1 0.43 0.19 11 5.42 98.74 10 5 No 66 -3.69 No 0 0 No -18 0.4 No 52 40.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 231090125 - NM_024525 TTC13 1 0.62 0.25 15 4.93 78.35 30 5.41 No 37 0.7 No 0 0 No -29 0.78 Yes 41 78.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 231092229 - NM_024525 TTC13 1 9.52 3.35 68 3.29 84.82 17 4.57 No 71 0.07 No 0 0 No -17 0.53 No 53 77.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 231092307 - NM_024525 TTC13 1 3.37 1.22 48 7.48 84.71 51 7.58 Yes 9 0.7 No 25 0.92 Yes -25 0.93 Yes 45 93.12 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 231094044 - NM_024525 TTC13 1 0.19 0.1 7 -1.51 80.07 35 6.69 Yes 22 0.46 No 0 0 No -34 0.49 No 36 61.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 180320683 + NM_001288582 TTC14 1 0.23 0.21 10 -3.22 0 40 7.09 Yes 27 1.09 Yes 0 0 No -28 0.81 Yes 42 85.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180321906 + NM_001288582 TTC14 1 0.29 0.38 23 9.21 85.17 27 6.84 Yes 14 0.96 Yes 26 0.84 Yes -30 0.31 No 44 63.4 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 180322642 + NM_001288582 TTC14 1 0.16 0.11 7 -12.57 76.96 37 5.37 No 63 0.37 No 0 0 No -29 0.56 No 34 51.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 180322642 + NM_001288582 TTC14 1 0.88 0.68 32 -12.57 76.96 37 5.37 No 63 0.37 No 0 0 No -29 0.56 No 34 51.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 180322645 + NM_001288582 TTC14 1 0.19 0.15 7 -8.93 0 9 3.42 No 66 0.37 No 0 0 No -39 0.48 No 31 57.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 180323252 + NM_001288582 TTC14 1 0.51 0.56 25 7.17 82.8 24 7.42 Yes 11 1.41 Yes 0 0 No -23 0.93 Yes 47 94.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180323255 + NM_001288582 TTC14 1 0.28 0.25 15 4.95 79.36 27 7.62 Yes 14 1.4 Yes 0 0 No -26 0.93 Yes 44 94.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180326505 + NM_001288582 TTC14 1 13.04 7.43 71 -3.32 71.81 22 5.1 No 40 0.78 Yes 0 0 No -52 0.59 No 18 71.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 180326507 + NM_001288582 TTC14 1 0.32 0.17 10 -11.87 65.31 24 5.29 No 42 0.77 Yes 0 0 No -23 0.69 Yes 16 79.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 180327424 + NM_001288582 TTC14 1 1.22 0.5 25 -4.97 0 10 4 No 10 0.47 No 0 0 No -29 0.63 No 41 61.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 180328493 + NM_001288582 TTC14 1 3.03 0.35 21 9.37 80.6 25 4.82 No 54 0.73 No 28 0.84 Yes -29 0.39 No 45 50.69 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 43391628 + NM_018259 TTC17 1 1.05 0.81 31 7.48 85.65 24 3.91 No 62 0.3 No 23 0.59 Yes -23 0.68 Yes 47 71.65 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 43395056 + NM_018259 TTC17 1 0.51 0.43 22 5.2 85.02 18 5.39 No 72 1.19 Yes 0 0 No -17 0.58 No 53 82.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 43395059 + NM_018259 TTC17 1 0.24 0.21 12 3.25 80.12 21 5.66 Yes 75 1.19 Yes 0 0 No -20 0.8 Yes 50 87.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 43414254 + NM_018259 TTC17 1 0.33 0.29 14 8.67 87.71 18 4.61 No 59 1.13 Yes 0 0 No -23 0.66 Yes 47 73.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 43414280 + NM_018259 TTC17 1 1.04 0.86 40 6.83 90.06 24 5.37 No 11 0.63 No 0 0 No -23 0.7 Yes 47 84.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 43418010 + NM_018259 TTC17 1 0.29 0.24 14 0.34 63.02 42 6.67 Yes 71 1.69 Yes 0 0 No -41 0.73 Yes 29 65.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 43419574 + NM_018259 TTC17 1 3.21 2.69 62 4.64 83.56 36 5.83 Yes 16 1 Yes 22 0.64 Yes -28 0.92 Yes 42 83.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 43423230 + NM_018259 TTC17 1 0.32 0.25 12 5.98 74.98 66 6.69 Yes 0 0.71 No 0 0 No -21 0.43 No 42 67.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 43433436 + NM_018259 TTC17 1 0.27 0.21 11 4.45 78.28 37 6.21 Yes 24 0.6 No 0 0 No -36 0.7 Yes 34 63.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 43467480 + NM_018259 TTC17 1 45.4 29.18 72 6.79 86.02 24 6.31 Yes 11 1.21 Yes 23 0.87 Yes -28 0.32 No 42 57.21 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 43489705 + NM_018259 TTC17 1 0.47 0.25 14 -0.67 0 17 4.58 No 4 1.49 Yes 0 0 No -16 0.75 Yes 54 81.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 43515326 + NM_018259 TTC17 1 0.23 0.14 9 -4.18 0 30 7.62 Yes 17 1.58 Yes 0 0 No -29 0.95 Yes 41 95.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 15905970 + NM_001271420 TTC19 1 0.35 0.33 19 12.55 91.22 33 5.67 Yes 20 1.13 Yes 32 0.94 Yes -32 0.86 Yes 38 95.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 15912291 + NM_001271420 TTC19 1 1.23 1.1 43 5.4 66.07 30 5.83 Yes 17 0.83 Yes 0 0 No -29 0.89 Yes 41 86.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 15917422 + NM_001271420 TTC19 1 0.38 0.33 18 1.46 75.67 64 7.27 Yes 51 1.36 Yes 0 0 No -26 0.55 No 58 27.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 15927802 + NM_001271420 TTC19 1 0.74 0.65 32 7.28 85.02 28 7.68 Yes 15 1.54 Yes 27 0.89 Yes -27 0.94 Yes 43 95.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 15931567 + NM_001271420 TTC19 1 0.27 0.24 14 9.2 88.83 61 4.38 No 30 1.65 Yes 0 0 No -21 0.47 No 49 50.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 166736478 - NM_024753 TTC21B 1 1.59 0.47 27 9.83 85.92 23 5.19 No 10 0.33 No 22 0.97 Yes -22 0.94 Yes 48 96.78 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 166740526 - NM_024753 TTC21B 1 1.2 0.56 29 1.36 85.56 23 8.82 Yes 10 0.87 Yes 0 0 No -30 0.78 Yes 40 82.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 166747459 - NM_024753 TTC21B 1 0.51 0.13 9 1.72 72.45 38 5 No 47 0.57 No 0 0 No -29 0.42 No 38 56.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 166751335 - NM_024753 TTC21B 1 4.02 0.99 45 6.52 79.14 43 7.43 Yes 70 0.52 No 0 0 No -33 0.89 Yes 37 86.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 166756422 - NM_024753 TTC21B 1 1.15 0.51 30 7.19 90.2 19 7.11 Yes 6 1.47 Yes 25 0.75 Yes -22 0.82 Yes 48 75.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 99732739 - NM_001288615 TTC23 1 0.95 0.14 9 7.79 86.09 22 6.33 Yes 6 0.21 No 0 0 No -26 0.85 Yes 44 76.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 99755945 - NM_001288615 TTC23 1 3.14 0.36 22 10.43 99.52 68 8.04 Yes 55 0.85 Yes 0 0 No -32 0.74 Yes 18 70.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 99765752 - NM_001288615 TTC23 1 1.47 0.26 13 4.33 74.99 50 5.01 No 61 0.43 No 0 0 No -21 0.83 Yes 49 68.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 99765810 - NM_001288615 TTC23 1 1.08 0.19 10 5.96 88.63 34 4.44 No 21 0.63 No 0 0 No -26 0.72 Yes 44 66.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 32858994 + NM_001193509 TTC27 1 0.14 0.1 7 5.84 85.82 25 5.18 No 57 1.23 Yes 0 0 No -24 0.9 Yes 46 87.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32870808 + NM_001193509 TTC27 1 0.2 0.14 10 2.51 0 35 7.25 Yes 47 2.49 Yes 0 0 No -34 0.27 No 36 66.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32874163 + NM_001193509 TTC27 1 0.87 0.64 35 2.64 68.05 28 4.93 No 30 -2.4 No 0 0 No -27 0.67 Yes 43 70.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 32875175 + NM_001193509 TTC27 1 0.22 0.17 9 5.65 90.1 20 5 No 7 0.96 Yes 19 0.78 Yes -19 0.63 No 51 72.41 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 32875199 + NM_001193509 TTC27 1 0.17 0.13 9 -0.38 80.89 22 5.71 Yes 31 0.94 Yes 0 0 No -26 0.74 Yes 44 78.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32898785 + NM_001193509 TTC27 1 0.25 0.24 13 7 86.66 17 5.88 Yes 4 0.92 Yes 0 0 No -32 0.75 Yes 38 82.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32899750 + NM_001193509 TTC27 1 0.42 0.42 24 3.01 0 29 5.74 Yes 16 1.21 Yes 0 0 No -28 0.71 Yes 42 84.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32903519 + NM_001193509 TTC27 1 0.1 0.13 7 7.3 88.56 33 7.62 Yes 54 1.01 Yes 0 0 No -32 0.39 No 30 62.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 32910118 + NM_001193509 TTC27 1 0.12 0.15 9 6.8 75.62 59 10.44 Yes 46 2.21 Yes 0 0 No -58 0.78 Yes 12 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32910118 + NM_001193509 TTC27 1 0.71 0.78 37 6.8 75.62 59 10.44 Yes 46 2.21 Yes 0 0 No -58 0.78 Yes 12 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 32937651 + NM_001193509 TTC27 1 0.21 0.18 11 -1.67 0 48 8.32 Yes 35 1.5 Yes 0 0 No -42 0.53 No 28 70.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 32946711 + NM_001193509 TTC27 1 0.23 0.19 13 11 88.27 46 6.44 Yes 49 2.02 Yes 0 0 No -45 0.91 Yes 25 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 33005120 + NM_001193509 TTC27 1 0.56 0.46 24 7.08 82.22 29 8.06 Yes 16 0.91 Yes 28 0.79 Yes -28 0.83 Yes 42 68.64 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 33012108 + NM_001193509 TTC27 1 0.14 0.13 7 1.29 66.93 18 5.15 No 64 0.01 No 0 0 No -24 0.67 Yes 46 77.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 38460607 + NM_003316 TTC3 1 0.3 0.25 16 4.58 60.69 39 6.2 Yes 70 0.54 No 0 0 No -43 0.38 No 32 50.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 38462841 + NM_003316 TTC3 1 5.79 4.68 70 12.75 87.64 19 5.36 No 6 0.87 Yes 0 0 No -24 0.63 No 46 74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 38469020 + NM_003316 TTC3 1 0.12 0.13 8 9.87 97.96 36 8.79 Yes 23 0.9 Yes 0 0 No -28 0.53 No 42 70.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 38469020 + NM_003316 TTC3 1 0.11 0.11 7 9.87 97.96 36 8.79 Yes 23 0.9 Yes 0 0 No -28 0.53 No 42 70.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 38470214 + NM_003316 TTC3 1 2.69 2.49 57 7.96 82.21 34 7.24 Yes 21 1.17 Yes 27 0.86 Yes -27 0.54 No 37 68.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 38471923 + NM_003316 TTC3 1 0.34 0.35 16 5.61 84 27 4.97 No 3 0.7 No 0 0 No -26 0.6 No 44 42.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 38481377 + NM_003316 TTC3 1 0.19 0.21 12 0.55 74.84 18 4.9 No 56 -3.8 No 0 0 No -22 0.37 No 52 34.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 38493145 + NM_003316 TTC3 1 0.22 0.26 15 8.31 76.61 34 5.95 Yes 31 1.32 Yes 0 0 No -34 0.84 Yes 36 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 38493536 + NM_003316 TTC3 1 0.3 0.35 20 5.94 79.82 33 7.46 Yes 14 0.61 No 26 0.42 Yes -32 0.53 No 38 57.3 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr21 38499011 + NM_003316 TTC3 1 0.08 0.13 7 8.5 79.25 35 5.92 Yes -2 0.32 No 0 0 No -28 0.7 Yes 42 48.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 38504651 + NM_003316 TTC3 1 0.42 0.75 33 12.05 88.27 40 6.32 Yes 27 1.19 Yes 0 0 No -33 0.5 No 37 73.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 38526835 + NM_003316 TTC3 1 1.13 1.71 57 5.38 75.25 24 5.74 Yes 11 0.98 Yes 0 0 No -23 0.65 No 47 77.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 38527021 + NM_003316 TTC3 1 0.66 0.99 46 2 0 50 7.78 Yes 32 0.47 No 0 0 No -45 0.35 No 27 51.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 38527179 + NM_003316 TTC3 1 0.13 0.17 10 5.27 85.02 18 7 Yes 5 1.7 Yes 0 0 No -17 0.58 No 53 81.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 38529462 + NM_003316 TTC3 1 25.1 27.13 72 7.88 79.26 29 7.07 Yes 16 1.11 Yes 28 0.95 Yes -28 0.88 Yes 42 95.2 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 38530432 + NM_003316 TTC3 1 3.77 3.97 71 7.93 97.57 27 5.2 No 14 0.16 No 26 0.81 Yes -26 0.72 Yes 44 63.92 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr21 38533108 + NM_003316 TTC3 1 0.09 0.18 12 3.35 0 27 6.44 Yes 14 1.59 Yes 0 0 No -30 0.86 Yes 40 77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 38536366 + NM_003316 TTC3 1 0.33 0.44 23 1.14 67.74 20 4.69 No 55 0.16 No 0 0 No -19 0.9 Yes 22 61.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 74718655 + NM_022492 TTC31 1 0.44 0.17 10 3.98 71.75 35 6 Yes 56 2.04 Yes 23 0.73 Yes -34 0.46 No 40 64.7 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 74719070 + NM_022492 TTC31 1 7.8 1.28 47 2.05 72.69 28 5.38 No 65 1.19 Yes 27 0.94 Yes -27 0.89 Yes 43 93.95 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 74719802 + NM_022492 TTC31 1 2.52 0.79 37 5.21 87.52 12 4.8 No 57 1.64 Yes 24 0.93 Yes -24 0.69 Yes 46 67.86 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 74720051 + NM_022492 TTC31 1 4.87 1.76 59 8.79 89.5 41 6.08 Yes 29 -0.68 No 29 0.6 Yes -24 0.68 Yes 29 79.79 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 20101354 - NM_001008237 TTC32 1 4.34 0.28 14 1.49 76.22 26 6.08 Yes -3 -0.97 No 0 0 No -25 0.96 Yes 45 94.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 40721320 - NM_012382 TTC33 1 0.42 0.33 15 8.82 80.59 37 5.19 No 71 0.59 No 0 0 No -30 0.63 No 40 66.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 40721377 - NM_012382 TTC33 1 0.4 0.31 17 5.76 82.16 27 5.82 Yes 47 1.1 Yes 0 0 No -26 0.64 No 44 53.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 40727064 - NM_012382 TTC33 1 0.45 0.36 21 7.48 80.45 31 5.74 Yes 18 0.98 Yes 0 0 No -30 0.92 Yes 40 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 40742085 - NM_012382 TTC33 1 0.49 0.53 25 3.19 0 30 6.7 Yes 17 1 Yes 0 0 No -29 0.58 No 40 79.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 94823399 - NM_014639 TTC37 1 0.82 1.58 56 7.6 88.87 30 5.6 Yes 23 1.54 Yes 0 0 No -35 0.64 No 35 79.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 94828653 - NM_014639 TTC37 1 0.06 0.11 7 6.48 89.03 15 4.94 No 69 0.75 No 0 0 No -20 0.85 Yes 50 78.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94829654 - NM_014639 TTC37 1 0.18 0.26 15 6.57 78.3 17 5.12 No 4 0.49 No 0 0 No -26 0.67 Yes 44 66.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 94830495 - NM_014639 TTC37 1 0.49 0.76 38 4.38 82.2 24 6.63 Yes 11 1.82 Yes 0 0 No -23 0.93 Yes 47 94.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 94832922 - NM_014639 TTC37 1 0.3 0.51 23 7.89 79.21 33 6.24 Yes 20 0.89 Yes 0 0 No -32 0.62 No 38 52.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 94842697 - NM_014639 TTC37 1 0.72 1.26 46 4.69 94.73 22 5.11 No 28 0.27 No 22 0.76 Yes -22 0.56 No 49 38.15 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 94843873 - NM_014639 TTC37 1 0.11 0.19 9 8.14 71.5 38 5.27 No 25 1.04 Yes 0 0 No -24 0.57 No 46 71.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 94845388 - NM_014639 TTC37 1 0.38 0.44 25 -1.1 0 26 4.73 No 1 0.67 No 0 0 No -31 0.64 No 39 50.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 94848523 - NM_014639 TTC37 1 0.08 0.14 9 7.63 85.01 51 4.95 No 2 0.62 No 0 0 No -29 0.78 Yes 41 82.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94860295 - NM_014639 TTC37 1 0.08 0.14 10 -13.8 0 35 9 Yes 9 -1.08 No 0 0 No -31 0.61 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 94861169 - NM_014639 TTC37 1 0.25 0.5 26 5.47 68.67 35 6 Yes 44 0.78 Yes 27 0.39 Yes -30 0.46 No 40 66.61 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 94863914 - NM_014639 TTC37 1 0.25 0.25 14 0.79 63.87 75 5.77 Yes 66 0.15 No 0 0 No -39 0.7 Yes 31 85.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94872639 - NM_014639 TTC37 1 0.16 0.29 18 -1.69 0 26 5 No 72 0.85 Yes 27 0.66 Yes -18 0.4 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 94874802 - NM_014639 TTC37 1 0.06 0.1 7 4.57 86.45 24 6.4 Yes 71 -2.76 No 0 0 No -24 0.57 No 46 62.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 94879028 - NM_014639 TTC37 1 0.31 0.57 32 -0.71 0 34 8.12 Yes 21 2.39 Yes 0 0 No -33 0.84 Yes 37 92.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 94881912 - NM_014639 TTC37 1 0.14 0.28 17 8.55 87.46 28 5.22 No 62 0.7 No 0 0 No -21 0.68 Yes 49 79.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 94882873 - NM_014639 TTC37 1 0.07 0.15 10 -1.46 0 18 4.36 No 39 0.71 No 23 0.91 Yes -17 0.63 No 53 68.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 94888933 - NM_014639 TTC37 1 1.3 0.81 38 9.29 82.33 39 6.48 Yes 37 0.63 No 0 0 No -28 0.81 Yes 42 79.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 46665038 + NM_017931 TTC38 1 1.93 0.54 25 11.69 90 33 6.08 Yes 20 0.92 Yes 32 0.89 Yes -32 0.86 Yes 38 75.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 46675965 + NM_017931 TTC38 1 0.39 0.18 12 10.29 91.57 38 7.94 Yes NA NA NA 37 0.41 Yes -30 0.64 No 33 89.68 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr22 46677420 + NM_017931 TTC38 1 0.36 0.17 12 7.16 78.6 26 5.19 No 66 1.01 Yes 0 0 No -25 0.95 Yes 45 92.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 46677517 + NM_017931 TTC38 1 0.36 0.17 10 5.68 78.75 18 4.2 No 55 1.74 Yes 0 0 No -24 0.53 No 46 49.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 46677867 + NM_017931 TTC38 1 2 0.5 28 9.83 93.86 21 4.88 No 20 0.07 No 25 0.9 Yes -25 0.82 Yes 46 75.71 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 46681107 + NM_017931 TTC38 1 0.36 0.13 9 9.3 94.45 32 5.24 No 6 0.52 No 24 0.92 Yes -24 0.76 Yes 47 72.28 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 46682062 + NM_017931 TTC38 1 3.57 0.88 36 11.16 90.43 23 8.86 Yes 10 2.38 Yes 0 0 No -22 0.78 Yes 48 82.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 46683269 + NM_017931 TTC38 1 0.47 0.14 7 8.44 88 20 5.33 No NA NA NA 0 0 No -24 0.59 No 53 51.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 46688099 + NM_017931 TTC38 1 1.99 0.58 32 6.2 87.44 55 8.07 Yes 42 2.13 Yes 20 0.15 Yes -46 0.54 No 16 70.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 46688099 + NM_017931 TTC38 1 22.48 7.33 70 6.2 87.44 55 8.07 Yes 42 2.13 Yes 20 0.15 Yes -46 0.54 No 16 70.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr18 21659175 + NM_153211 TTC39C 1 0.21 0.14 10 4.34 92.06 23 4.49 No 25 0.18 No 0 0 No -22 0.84 Yes 48 89.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 21696205 + NM_153211 TTC39C 1 0.34 0.19 12 8.15 74.94 31 7.86 Yes 64 1.74 Yes 0 0 No -31 0.47 No 39 58.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 21710285 + NM_153211 TTC39C 1 0.21 0.15 8 1.53 0 12 4.24 No 16 1.34 Yes 0 0 No -36 0.56 No 34 72.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 20760270 - NM_138376 TTC5 1 0.33 0.13 8 4.16 73.43 27 5.1 No 24 1.49 Yes 0 0 No -26 0.55 No 34 41.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 20770450 - NM_138376 TTC5 1 0.44 0.25 16 3.46 74.96 20 6.32 Yes 7 1.84 Yes 0 0 No -23 0.83 Yes 47 70.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47177796 + NM_001288953 TTC7A 1 0.69 0.79 36 6.22 84.77 24 5.2 No 11 0.34 No 0 0 No -23 0.91 Yes 47 95.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47184882 + NM_001288953 TTC7A 1 0.63 0.75 37 5.72 90.4 32 4.62 No 19 0.39 No 0 0 No -26 0.42 No 44 57.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47185633 + NM_001288953 TTC7A 1 1.13 1.47 49 10.03 88.15 43 7 Yes 40 0.61 No 42 0.41 Yes -31 0.46 No 35 73.62 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 47209856 + NM_001288953 TTC7A 1 0.26 0.33 18 6.83 80.13 36 5.51 No 62 0.33 No 0 0 No -28 0.5 No 52 78.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47222910 + NM_001288953 TTC7A 1 0.27 0.28 17 4.23 82.07 20 3.78 No 26 0.68 No 0 0 No -23 0.95 Yes 47 95.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47225807 + NM_001288953 TTC7A 1 0.6 0.63 30 3.32 0 17 4.58 No 60 1.31 Yes 0 0 No -20 0.94 Yes 50 94.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47272855 + NM_001288953 TTC7A 1 0.18 0.18 11 10.38 91.96 27 5.71 Yes 14 1.15 Yes 0 0 No -26 0.75 Yes 44 81.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47274404 + NM_001288953 TTC7A 1 0.67 0.53 28 7.89 90.94 29 5.92 Yes 42 -2.04 No 28 0.36 Yes -28 0.6 No 42 52.48 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 47278967 + NM_001288953 TTC7A 1 0.46 0.31 19 4.84 73.97 25 6 Yes 12 1.31 Yes 0 0 No -24 0.87 Yes 46 87.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 71112925 + NM_015351 TTC9 1 0.18 0.13 9 9.68 95.88 25 7.42 Yes 12 0.61 No 0 0 No -25 0.74 Yes 46 81.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 71116771 + NM_015351 TTC9 1 0.54 0.46 22 11 82.22 35 7.35 Yes 52 0.78 Yes 0 0 No -34 0.76 Yes 36 86.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62502867 + NM_001318816 TTC9C 1 2.98 0.18 10 7.4 89.7 20 3.37 No 46 1.52 Yes 0 0 No -58 0.55 No 12 49.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 62502413 + NM_001318816 TTC9C 1 1.85 0.11 7 8.99 92.17 16 4.86 No 3 0.86 Yes 0 0 No -27 0.59 No 47 46.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 135251554 - NM_007344 TTF1 1 0.28 0.13 7 -3.23 82.15 31 6.23 Yes 70 0.42 No 0 0 No -25 0.69 Yes 45 90.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 135254493 - NM_007344 TTF1 1 2.69 1.46 43 4.15 76.3 38 5.31 No 61 2.08 Yes 0 0 No -22 0.92 Yes 48 93.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 135256430 - NM_007344 TTF1 1 0.58 0.33 18 3.65 79.53 21 6.39 Yes 8 1.26 Yes 0 0 No -20 0.86 Yes 50 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 117615072 + NM_003594 TTF2 1 0.17 0.13 8 3.01 0 41 6.65 Yes 67 0.54 No 0 0 No -30 0.43 No 40 71.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 117620516 + NM_003594 TTF2 1 4.72 6.57 72 8.23 76.02 29 5.15 No -1 1.08 Yes 23 0.59 Yes -20 0.55 No 50 75.22 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 117624452 + NM_003594 TTF2 1 0.21 0.31 16 7.83 92.39 33 6.69 Yes 20 1.6 Yes 0 0 No -32 0.72 Yes 38 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 117624452 + NM_003594 TTF2 1 8.86 13.06 72 7.83 92.39 33 6.69 Yes 20 1.6 Yes 0 0 No -32 0.72 Yes 38 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 117629316 + NM_003594 TTF2 1 0.1 0.11 7 7.29 83.57 14 6.85 Yes 1 0.85 Yes 0 0 No -42 0.49 No 28 71.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 117630529 + NM_003594 TTF2 1 0.56 0.61 31 5.84 90.43 24 4.35 No 46 0.44 No 0 0 No -21 0.76 Yes 49 81.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 117633132 + NM_003594 TTF2 1 0.11 0.18 11 -0.11 0 9 4.47 No 10 -2.12 No 28 0.91 Yes -21 0.66 No 49 79.72 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 117633945 + NM_003594 TTF2 1 0.23 0.33 20 1.22 83.83 38 6.92 Yes 25 0.91 Yes 41 0.71 Yes -27 0.64 No 43 75.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 117634369 + NM_003594 TTF2 1 0.12 0.14 9 -6.67 0 17 4.33 No 63 -4.75 No 0 0 No -16 0.58 No 54 52.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 117640827 + NM_003594 TTF2 1 0.18 0.32 16 11.02 95.65 22 5.92 Yes 9 0.81 Yes 28 0.57 Yes -21 0.73 Yes 42 64.48 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 117640827 + NM_003594 TTF2 1 1.47 2.29 63 11.02 95.65 22 5.92 Yes 9 0.81 Yes 28 0.57 Yes -21 0.73 Yes 42 64.48 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 36617319 - NM_014657 TTI1 1 0.41 0.26 15 3.38 0 18 4.07 No 31 1.19 Yes 0 0 No -18 0.6 No 52 48.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 36617342 - NM_014657 TTI1 1 0.31 0.19 10 4.93 79.73 21 5.2 No 8 1.16 Yes 0 0 No -20 0.59 No 50 72.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 36623275 - NM_014657 TTI1 1 1.65 1 44 9.42 83.32 33 6.59 Yes 20 1.47 Yes 0 0 No -24 0.45 No 38 50.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 36625447 - NM_014657 TTI1 1 0.29 0.15 9 7.23 83.8 37 5.48 No 15 1.34 Yes 0 0 No -36 0.61 No 34 68.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 36628948 - NM_014657 TTI1 1 0.25 0.13 8 10.66 90.32 38 7.14 Yes 25 0.16 No 26 0.95 Yes -37 0.75 Yes 33 74.57 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 36631196 - NM_014657 TTI1 1 1.32 1.01 43 4.35 70.65 41 5.13 No 13 -2.63 No 24 0.4 Yes -40 0.4 No 30 77.43 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 80715558 + NM_001166691 TTK 1 858.22 74.35 72 6.14 0 22 4.58 No 9 1.22 Yes 24 0.77 Yes -21 0.88 Yes 49 86.63 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 80715821 + NM_001166691 TTK 1 1.27 1.1 41 8.27 79.3 30 5.89 Yes 17 1.56 Yes 29 0.93 Yes -29 0.76 Yes 41 84.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 80717661 + NM_001166691 TTK 1 0.1 0.1 7 2.6 79.51 35 5.52 No 26 1.2 Yes 0 0 No -23 0.47 No 32 40.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 80726400 + NM_001166691 TTK 1 0.13 0.14 8 11.84 81.34 24 6.49 Yes 11 0.64 No 0 0 No -23 0.47 No 47 55.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 80736094 + NM_001166691 TTK 1 735.66 110.13 72 8.59 85.24 29 7.27 Yes 16 0.74 No 28 0.7 Yes -28 0.59 No 42 73.23 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 80746173 + NM_001166691 TTK 1 0.95 0.97 39 4.89 81.44 30 6 Yes 46 0.53 No 22 0.81 Yes -29 0.89 Yes 41 90.36 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 80751814 + NM_001166691 TTK 1 0.45 0.57 29 1.77 64.22 38 5.78 Yes 50 -5.3 No 28 0.59 Yes -20 0.63 No 49 35.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 113240275 + NM_153712 TTL 1 0.74 0.25 14 5.21 67.17 31 7.66 Yes 18 1.17 Yes 0 0 No -30 0.81 Yes 40 83.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 113240716 + NM_153712 TTL 1 2.16 0.68 34 6.8 83.13 15 4.8 No 2 0.89 Yes 22 0.92 Yes -22 0.84 Yes 48 82.34 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 113253473 + NM_153712 TTL 1 5.44 2.54 61 2.04 74.14 23 7.63 Yes 10 1.09 Yes 0 0 No -22 0.86 Yes 48 79.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 113253513 + NM_153712 TTL 1 0.47 0.24 14 3.85 70.11 21 6.4 Yes 50 1.08 Yes 0 0 No -30 0.53 No 37 60.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 113253663 + NM_153712 TTL 1 0.47 0.21 15 5.64 72.59 52 7.92 Yes 39 1.83 Yes 0 0 No -26 0.66 No 19 89.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 113260491 + NM_153712 TTL 1 0.36 0.17 9 -2.79 61.64 29 5.57 Yes 16 0.26 No 0 0 No -27 0.39 No 46 45.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 113276075 + NM_153712 TTL 1 0.54 0.39 22 10.56 92.17 19 6.18 Yes 6 0.22 No 0 0 No -26 0.45 No 47 58.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 113278798 + NM_153712 TTL 1 29.96 9.43 70 8.94 82.26 22 6.78 Yes 9 1.78 Yes 0 0 No -21 0.9 Yes 49 87.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43564162 - NM_015140 TTLL12 1 0.71 1.15 45 -4 0 32 6.67 Yes 19 0.88 Yes 0 0 No -31 0.94 Yes 39 84.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 43567093 - NM_015140 TTLL12 1 0.06 0.18 12 4.75 77.1 23 5.84 Yes 39 -1.6 No 0 0 No -22 0.52 No 48 59.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 43570401 - NM_015140 TTLL12 1 0.55 0.92 40 -9.01 0 13 4.22 No 25 0.26 No 0 0 No -37 0.9 Yes 33 71.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 43575242 - NM_015140 TTLL12 1 0.84 1.51 48 13.08 89.13 30 7.39 Yes 63 1.31 Yes 0 0 No -29 0.93 Yes 41 97.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 9876777 + NR_037162 TTLL3 1 1.92 0.11 7 -0.62 77.97 36 7.06 Yes 23 1.72 Yes 35 0.86 Yes -35 0.81 Yes 35 94.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 219591995 + NM_014640 TTLL4 1 5.59 2.31 58 2.16 0 41 8 Yes 28 0.77 Yes 0 0 No -40 0.88 Yes 30 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219592747 + NM_014640 TTLL4 1 1.5 0.75 34 8.67 78.33 26 4.81 No 13 1.49 Yes 25 0.83 Yes -21 0.43 No 49 46.21 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 219601034 + NM_014640 TTLL4 1 1.37 0.67 38 10.64 89.11 24 5.29 No 18 1.12 Yes 23 0.81 Yes -23 0.64 No 47 86.84 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 219609053 + NM_014640 TTLL4 1 0.27 0.21 12 10.13 86.2 25 5.39 No 12 0.86 Yes 0 0 No -22 0.55 No 48 67.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 219609834 + NM_014640 TTLL4 1 0.52 0.33 19 3.95 76.37 55 5.84 Yes 52 1.17 Yes 25 0.42 Yes -28 0.62 No 42 67.53 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 219611741 + NM_014640 TTLL4 1 0.17 0.11 8 1.04 78.07 14 5 No 46 2.25 Yes 24 0.7 Yes -35 0.63 No 35 83.55 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 219611752 + NM_014640 TTLL4 1 0.65 0.4 23 2 0 21 4.38 No 57 2.24 Yes 24 0.7 Yes -46 0.83 Yes 24 74.28 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 219612016 + NM_014640 TTLL4 1 0.31 0.18 11 0.59 0 24 6.32 Yes 11 1.08 Yes 0 0 No -23 0.91 Yes 47 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219613911 + NM_014640 TTLL4 1 0.18 0.11 8 7.18 90.24 64 6.51 Yes 60 -1.78 No 0 0 No -24 0.54 No 46 77.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 219616333 + NM_014640 TTLL4 1 0.52 0.28 13 4.69 80.73 34 6.59 Yes 21 1.52 Yes 0 0 No -23 0.77 Yes 47 71.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219617843 + NM_014640 TTLL4 1 2.82 1.26 51 -4.92 0 9 3.87 No 6 1.58 Yes 30 0.76 Yes -36 0.48 No 34 60.79 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 219618780 + NM_014640 TTLL4 1 0.31 0.18 9 2.44 77.26 81 9.16 Yes 10 0.63 No 0 0 No -23 0.67 Yes 39 40.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 219618953 + NM_014640 TTLL4 1 3.5 1.83 60 9.89 82.63 27 5.66 Yes 14 0.85 Yes 26 0.94 Yes -26 0.93 Yes 44 89.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 76129428 + NM_015072 TTLL5 1 0.9 0.14 9 1.47 78.22 16 5.89 Yes 30 0.31 No 0 0 No -20 0.43 No 50 59.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 76133810 + NM_015072 TTLL5 1 0.37 0.14 9 9.27 87.68 28 6.14 Yes 5 0.68 No 0 0 No -27 0.86 Yes 43 81.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 76147010 + NM_015072 TTLL5 1 3.98 1.24 45 9.94 91.39 23 5.09 No 71 -1.74 No 0 0 No -27 0.65 No 43 41.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 76165527 + NM_015072 TTLL5 1 0.5 0.15 10 -0.81 67.4 59 5.34 No 71 1.15 Yes 21 0.22 Yes -47 0.83 Yes 23 88.46 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 76175521 + NM_015072 TTLL5 1 4.68 1.74 56 9.71 84.05 36 6.16 Yes 54 0.31 No 35 0.17 Yes -35 0.83 Yes 35 84.39 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 76203908 + NM_015072 TTLL5 1 41.04 12.33 72 11.55 82.24 32 4.97 No 68 -3.89 No 24 0.76 Yes -24 0.77 Yes 46 84.6 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 76224173 + NM_015072 TTLL5 1 22.91 5.96 70 10.28 87.36 28 6.7 Yes 15 2.11 Yes 27 0.95 Yes -27 0.87 Yes 43 92.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 76231614 + NM_015072 TTLL5 1 0.33 0.11 7 -0.04 0 58 6.15 Yes 37 1.63 Yes 0 0 No -49 0.64 No 21 86.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 76232378 + NM_015072 TTLL5 1 0.52 0.15 11 7.81 86.57 14 5.52 No 1 0.62 No 25 0.73 Yes -21 0.42 No 52 72.8 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 76232446 + NM_015072 TTLL5 1 5.37 1.57 53 -5.65 0 25 5.93 Yes 45 0.74 No 0 0 No -24 0.41 No 58 20.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 76232566 + NM_015072 TTLL5 1 2.57 0.74 36 4.37 75.72 28 5.63 Yes -4 0.38 No 0 0 No -27 0.39 No 44 33.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 76241076 + NM_015072 TTLL5 1 0.38 0.11 8 5.95 80.39 50 9.21 Yes 37 0.78 Yes 0 0 No -50 0.52 No 20 73.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 76252176 + NM_015072 TTLL5 1 2.51 0.46 21 7.47 83.5 31 6.04 Yes 4 0.71 No 0 0 No -22 0.71 Yes 48 75.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 76259255 + NM_015072 TTLL5 1 36.82 6.46 72 7.74 81.81 29 4.73 No 66 1.56 Yes 28 0.75 Yes -28 0.47 No 42 56.35 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 76269484 + NM_015072 TTLL5 1 1.86 0.5 25 8.15 81.01 25 5.56 Yes 12 0.72 No 26 0.78 Yes -24 0.83 Yes 46 87.65 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 76279012 + NM_015072 TTLL5 1 0.56 0.13 9 4.24 73.79 65 8.69 Yes 52 1.76 Yes 0 0 No -43 0.91 Yes 27 95.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 76286945 + NM_015072 TTLL5 1 0.41 0.13 7 7.9 84.84 34 6.21 Yes 42 1.28 Yes 33 0.68 Yes -29 0.44 No 41 44.63 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 76353042 + NM_015072 TTLL5 1 0.63 0.15 8 3.31 68.97 89 9.64 Yes 36 1.3 Yes 26 0.56 Yes -52 0.49 No 19 70.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 76372897 + NM_015072 TTLL5 1 8.53 1.96 59 10.62 95.48 29 5.42 No 71 0.96 Yes 28 0.67 Yes -28 0.78 Yes 42 70.86 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 76407766 + NM_015072 TTLL5 1 1.76 0.39 22 6.47 78.79 31 6.12 Yes 10 1.09 Yes 26 0.79 Yes -26 0.76 Yes 44 80.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 76408032 + NM_015072 TTLL5 1 7.38 1.71 60 4.45 0 26 7 Yes 60 0.71 No 0 0 No -25 0.66 No 45 41.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 43108607 + NM_024331 TTPAL 1 5.43 0.35 20 5.04 78.99 23 4.06 No -1 1.27 Yes 27 0.57 Yes -22 0.64 No 48 62.55 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 43108607 + NM_024331 TTPAL 1 5.22 0.31 19 5.04 78.99 23 4.06 No -1 1.27 Yes 27 0.57 Yes -22 0.64 No 48 62.55 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 43109215 + NM_024331 TTPAL 1 0.78 0.54 26 6.56 93.14 20 4.29 No 60 0.66 No 0 0 No -23 0.76 Yes 47 89.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 43112980 + NM_024331 TTPAL 1 0.63 0.47 26 0.55 0 71 7.36 Yes 46 1.2 Yes 0 0 No -32 0.42 No 29 39.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 43114352 + NM_024331 TTPAL 1 0.51 0.35 20 6.11 72.53 26 5.36 No 13 1.03 Yes 0 0 No -25 0.91 Yes 45 88.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43117815 + NM_024331 TTPAL 1 0.45 0.44 24 9.88 87.61 25 6.48 Yes 12 1.49 Yes 0 0 No -24 0.86 Yes 46 79.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2673737 + NM_025250 TTYH3 1 0.3 0.15 7 10.47 83.69 32 6.08 Yes 19 2.36 Yes 0 0 No -27 0.87 Yes 43 87.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2685405 + NM_025250 TTYH3 1 0.36 0.32 16 8.52 86.24 30 6.71 Yes 17 1.41 Yes 0 0 No -29 0.87 Yes 41 94.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 2687547 + NM_025250 TTYH3 1 0.33 0.25 15 6.96 82.46 27 5.66 Yes 25 0.99 Yes 44 0.08 Yes -26 0.88 Yes 44 76.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 2692548 + NM_025250 TTYH3 1 0.13 0.15 11 -0.92 75.77 25 6.11 Yes NA NA NA 27 0.56 Yes -24 0.69 Yes 46 63.74 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 2699573 + NM_025250 TTYH3 1 2.32 3.26 61 4.19 66.69 58 7.98 Yes 45 0.88 Yes 26 0.64 Yes -57 0.57 No 20 81.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 49580185 - NM_006009 TUBA1A 1 0.15 0.19 12 1.77 79.4 16 4.68 No 3 0.02 No 0 0 No -36 0.43 No 55 25.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 49523168 - NM_006082 TUBA1B 1 0 0.19 11 -2.51 0 9 3.87 No 28 2.14 Yes 0 0 No -36 0.68 Yes 34 77.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49524058 - NM_006082 TUBA1B 1 0 0.14 9 7.7 79.04 19 7.21 Yes 76 1.1 Yes 18 0.17 Yes -47 0.26 No 52 55.79 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 49663667 + NM_032704 TUBA1C 1 0.03 0.35 17 1.77 78.33 16 4.69 No 24 1.52 Yes 0 0 No -36 0.89 Yes 34 77.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 49664102 + NM_032704 TUBA1C 1 0.04 0.21 12 4.31 79.45 51 7.2 Yes 42 0.52 No 0 0 No -33 0.63 No 37 53.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 18609124 + NM_018943 TUBA8 1 3.38 0.35 17 6.05 0 33 7.91 Yes 10 1.35 Yes 0 0 No -35 0.93 Yes 35 96.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 3155153 - NM_001069 TUBB2A 1 0.07 0.14 8 -0.87 0 28 6.38 Yes 15 1.76 Yes 0 0 No -27 0.85 Yes 43 88.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 3155290 - NM_001069 TUBB2A 1 1.6 3.15 62 3.76 85.4 23 5 No 10 1.17 Yes 22 0.97 Yes -22 0.92 Yes 48 93.71 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 140136173 + NM_006088 TUBB4B 1 0.02 0.14 8 -12.26 0 44 6.71 Yes 31 0.52 No 0 0 No -39 0.72 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 140136931 + NM_006088 TUBB4B 1 0.04 0.33 21 -1.75 51.86 38 6.16 Yes 25 1.19 Yes 28 0.74 Yes -37 0.53 No 33 73.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 140136952 + NM_006088 TUBB4B 1 0.03 0.28 19 1.3 0 27 5.48 No 46 1.19 Yes 0 0 No -26 0.45 No 47 57.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 12309497 + NM_001303530 TUBB6 1 0.14 0.38 21 11.57 86.85 21 5.36 No 8 1.12 Yes 0 0 No -25 0.84 Yes 45 80.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 112397296 - NM_016262 TUBE1 1 1.1 0.25 15 2.4 69.6 26 5.38 No 41 0.39 No 0 0 No -25 0.76 Yes 45 65.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 112397378 - NM_016262 TUBE1 1 0.35 0.14 7 9.22 81.15 26 5.86 Yes 47 0.68 No 28 0.72 Yes -26 0.44 No 39 54.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 112397678 - NM_016262 TUBE1 1 1.12 0.39 20 7.83 86.15 38 6.16 Yes 49 1.21 Yes 0 0 No -22 0.8 Yes 48 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 112406947 - NM_016262 TUBE1 1 3.07 0.83 36 9.41 90.59 17 4.02 No 21 0.69 No 27 0.93 Yes -27 0.93 Yes 43 89.09 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 112407808 - NM_016262 TUBE1 1 0.65 0.15 11 1.19 0 25 6.92 Yes 12 0.99 Yes 0 0 No -24 0.64 No 46 42.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 40815440 + NM_001320509 TUBG2 1 0.92 0.11 7 7.36 94.08 21 4.78 No 62 0.46 No 0 0 No -20 0.93 Yes 50 93.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 40816671 + NM_001320509 TUBG2 1 0.48 0.11 8 8.8 79.97 27 6.02 Yes 14 0.62 No 0 0 No -26 0.81 Yes 44 80.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 135096689 - NM_001256617 TUBGCP2 1 2.49 3.24 65 3.89 76.74 25 6.78 Yes 67 0.06 No 24 0.9 Yes -24 0.85 Yes 46 71.34 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 135099100 - NM_001256617 TUBGCP2 1 0.39 0.44 21 4.33 75.62 25 6.36 Yes 2 1.52 Yes 0 0 No -24 0.83 Yes 46 60.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 135101783 - NM_001256617 TUBGCP2 1 1.04 0.94 39 3.92 78.99 25 5.43 No 39 1.85 Yes 0 0 No -24 0.73 Yes 46 47.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 135104597 - NM_001256617 TUBGCP2 1 0.24 0.26 17 9.38 97.01 25 6.11 Yes 12 0.57 No 0 0 No -24 0.95 Yes 46 96.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 135106755 - NM_001256617 TUBGCP2 1 1.37 1.43 54 -5.38 0 15 4.12 No 74 0.42 No 26 0.79 Yes -14 0.42 No 42 43.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 135113587 - NM_001256617 TUBGCP2 1 0.34 0.24 15 3.74 88.36 22 5 No 36 1.43 Yes 0 0 No -20 0.56 No 50 68.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 135113605 - NM_001256617 TUBGCP2 1 0.55 0.46 25 3.05 73.39 16 4.69 No 18 1.42 Yes 0 0 No -38 0.58 No 32 65.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 135114052 - NM_001256617 TUBGCP2 1 0.65 0.42 25 3.88 84 15 4.59 No 2 0.98 Yes 26 0.86 Yes -26 0.64 No 44 48.16 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 135114072 - NM_001256617 TUBGCP2 1 0.58 0.42 22 2.15 0 29 5.92 Yes 70 -4.12 No 26 0.86 Yes -29 0.53 No 41 57.54 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 135116456 - NM_001256617 TUBGCP2 1 0.26 0.17 11 6.78 83.32 16 5.81 Yes 3 1.02 Yes 0 0 No -23 0.27 No 47 48.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 135116521 - NM_001256617 TUBGCP2 1 0.33 0.21 12 8.39 91.83 25 5.61 Yes 59 -2.88 No 25 0.64 Yes -25 0.75 Yes 45 66.55 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr13 113153251 - NM_006322 TUBGCP3 1 3.19 1.28 47 1.16 0 27 8.49 Yes 14 0.97 Yes 26 0.59 Yes -33 0.56 No 37 77.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr13 113153255 - NM_006322 TUBGCP3 1 1.44 0.63 29 1.86 64.96 23 8.34 Yes 10 0.98 Yes 26 0.59 Yes -29 0.65 No 41 79.34 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr13 113174316 - NM_006322 TUBGCP3 1 0.33 0.25 13 3.56 82.67 23 4.86 No 41 0.76 No 0 0 No -22 0.85 Yes 48 61.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 113174331 - NM_006322 TUBGCP3 1 0.76 0.44 19 -2.22 0 39 6.66 Yes 26 0.75 No 0 0 No -38 0.38 No 32 79.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 113176179 - NM_006322 TUBGCP3 1 2.47 1.36 51 9.25 90.06 29 8.41 Yes 16 1.88 Yes 0 0 No -19 0.75 Yes 42 75.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 113199911 - NM_006322 TUBGCP3 1 0.32 0.19 12 12.36 93.68 47 7.12 Yes 12 0.62 No 0 0 No -24 0.8 Yes 46 86.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113200176 - NM_006322 TUBGCP3 1 0.32 0.18 11 0.59 0 45 7.5 Yes 32 0.55 No 0 0 No -44 0.57 No 26 68.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 113209264 - NM_006322 TUBGCP3 1 0.67 0.49 22 9.37 89.3 25 5.57 Yes 70 0.59 No 0 0 No -24 0.72 Yes 45 71.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 113210535 - NM_006322 TUBGCP3 1 0.79 0.42 22 2.47 0 25 6 Yes 12 0.32 No 0 0 No -24 0.61 No 46 61.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 113212745 - NM_006322 TUBGCP3 1 0.74 0.5 29 10.81 76.43 22 6.4 Yes 40 1.35 Yes 19 0.81 Yes -22 0.77 Yes 48 83.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 113238476 - NM_006322 TUBGCP3 1 1.3 0.53 24 8.44 87.36 19 5.39 No 6 1.3 Yes 24 0.52 Yes -22 0.59 No 46 56.02 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 43668652 + NM_001286414 TUBGCP4 1 1.73 0.88 42 8.44 87.72 17 4.96 No 43 1.11 Yes 23 0.53 Yes -23 0.35 No 54 32.22 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 43668721 + NM_001286414 TUBGCP4 1 0.37 0.18 13 8.93 83.38 29 4.6 No 70 0.94 Yes 21 0.93 Yes -23 0.63 No 47 69.2 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 43672179 + NM_001286414 TUBGCP4 1 0.3 0.18 12 -3.28 0 21 4.47 No 52 1.03 Yes 0 0 No -20 0.92 Yes 50 56.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 43677565 + NM_001286414 TUBGCP4 1 0.17 0.11 7 2.59 69.95 36 4.91 No 23 0.67 No 30 0.68 Yes -23 0.49 No 47 48.45 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 43677591 + NM_001286414 TUBGCP4 1 0.22 0.15 10 2.61 73.99 25 5.1 No 49 0.64 No 0 0 No -24 0.89 Yes 46 88.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 43690238 + NM_001286414 TUBGCP4 1 262.71 43.07 72 7.48 86.08 47 6.99 Yes 34 1.73 Yes 32 0.8 Yes -46 0.73 Yes 24 69.42 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 43691309 + NM_001286414 TUBGCP4 1 16.23 5.63 71 9.05 84.98 25 4.49 No 66 0.43 No 27 0.84 Yes -24 0.58 No 46 71.83 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 43693917 + NM_001286414 TUBGCP4 1 0.32 0.22 11 -0.61 0 28 6.4 Yes 15 0.93 Yes 0 0 No -27 0.78 Yes 43 70.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 22840247 + NM_052903 TUBGCP5 1 0.54 0.29 15 2.63 0 28 5.45 No 23 0.35 No 0 0 No -27 0.78 Yes 43 94.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 22840289 + NM_052903 TUBGCP5 1 0.58 0.38 13 8.23 84.18 21 6.46 Yes 8 0.68 No 0 0 No -28 0.64 No 42 68.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 22845758 + NM_052903 TUBGCP5 1 10.35 3.72 68 4.02 77.99 18 6.12 Yes 37 1.33 Yes 26 0.82 Yes -27 0.64 No 47 59.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 22848858 + NM_052903 TUBGCP5 1 0.27 0.15 9 5.29 74.52 29 5.48 No 46 -4.41 No 23 0.81 Yes -28 0.91 Yes 42 95.44 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 22848858 + NM_052903 TUBGCP5 1 0.24 0.11 8 5.29 74.52 29 5.48 No 46 -4.41 No 23 0.81 Yes -28 0.91 Yes 42 95.44 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 22849903 + NM_052903 TUBGCP5 1 1.56 0.68 29 5.84 78.97 20 5.57 Yes 72 1.16 Yes 0 0 No -19 0.71 Yes 51 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 22853687 + NM_052903 TUBGCP5 1 5.94 2.13 63 5.87 79.47 19 5.84 Yes 6 0.57 No 29 0.56 Yes -29 0.33 No 41 50.72 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 22853784 + NM_052903 TUBGCP5 1 2.18 0.82 35 8.48 81.31 54 7.75 Yes 62 1.68 Yes 0 0 No -53 0.39 No 17 75.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 22855086 + NM_052903 TUBGCP5 1 0.63 0.25 14 2.03 67.71 41 5.64 Yes 59 0.3 No 0 0 No -37 0.78 Yes 33 52.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50656281 - NM_020461 TUBGCP6 1 0.28 0.13 8 -4.6 56.08 17 5.92 Yes 4 0.1 No 20 0.81 Yes -16 0.8 Yes 54 27.88 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 50656499 - NM_020461 TUBGCP6 1 1.43 0.44 22 4.51 72.3 39 6.11 Yes 66 0.09 No 0 0 No -17 0.74 Yes 53 47.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50656528 - NM_020461 TUBGCP6 1 1.67 0.56 30 -4.94 64.44 22 4.51 No -3 0.73 No 27 0.35 Yes -9 0.67 Yes 33 26.86 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 50656563 - NM_020461 TUBGCP6 1 1.26 0.42 21 -3.39 0 22 4.55 No 45 -1.62 No 21 0.8 Yes -21 0.87 Yes 49 58.41 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 50656972 - NM_020461 TUBGCP6 1 0.83 0.49 24 10.51 85.13 33 5.83 Yes 51 0.66 No 0 0 No -27 0.82 Yes 43 84.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50657815 - NM_020461 TUBGCP6 1 1.12 0.44 23 8.28 78.32 54 8.64 Yes 41 1.42 Yes 0 0 No -53 0.72 Yes 17 94.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50658217 - NM_020461 TUBGCP6 1 1.25 0.65 33 -5.09 0 23 5.39 No 10 0.43 No 0 0 No -22 0.91 Yes 48 76.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50660978 - NM_020461 TUBGCP6 1 0.24 0.1 7 -8.51 0 10 3.86 No 70 0.62 No 0 0 No -22 0.86 Yes 48 56.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50660984 - NM_020461 TUBGCP6 1 16.72 5.89 71 -2.24 0 13 3.56 No 64 0.62 No 0 0 No -16 0.91 Yes 54 73.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50660998 - NM_020461 TUBGCP6 1 1.51 0.57 28 2.37 74.07 27 5.38 No 50 0.62 No 0 0 No -26 0.87 Yes 44 31.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50661018 - NM_020461 TUBGCP6 1 0.81 0.32 18 0.48 0 43 8 Yes 30 0.63 No 38 0.35 Yes -42 0.83 Yes 28 72.26 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 50661267 - NM_020461 TUBGCP6 1 0.34 0.13 8 5.65 86.31 22 5.99 Yes 38 1.9 Yes 0 0 No -21 0.93 Yes 49 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50662677 - NM_020461 TUBGCP6 1 0.34 0.22 15 -3.76 0 14 4.24 No 45 0.24 No 0 0 No -36 0.88 Yes 34 63.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 50662704 - NM_020461 TUBGCP6 1 0.3 0.19 12 -1.58 0 22 5.29 No 18 0.25 No 27 0.78 Yes -21 0.54 No 49 59.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 50663612 - NM_020461 TUBGCP6 1 2.79 1.1 51 9.89 96.32 23 5.39 No 30 0.74 No 0 0 No -22 0.89 Yes 48 86.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 50666010 - NM_020461 TUBGCP6 1 0.47 0.18 12 1.82 73.18 29 5.09 No 72 -4.28 No 0 0 No -25 0.56 No 42 58.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50670979 - NM_020461 TUBGCP6 1 1.83 0.79 33 4.09 0 26 7.61 Yes 13 2.45 Yes 0 0 No -25 0.87 Yes 45 87.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 50672312 - NM_020461 TUBGCP6 1 0.37 0.1 7 9.34 92.11 23 7.48 Yes NA NA NA 0 0 No -23 0.59 No 45 39.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28854945 - NM_003321 TUFM 1 0.05 0.38 21 7.3 87.44 25 5.03 No 52 0.47 No 0 0 No -25 0.77 Yes 43 53.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 28855897 - NM_003321 TUFM 1 0.03 0.21 12 -3.78 67.04 21 3.34 No 19 -2 No 26 0.89 Yes -28 0.66 No 42 46 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 28856133 - NM_003321 TUFM 1 0.04 0.22 14 1.08 80.66 12 3.91 No -1 1.16 Yes 0 0 No -21 0.59 No 49 51.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 31368037 + NR_110492 TUG1 1 0.53 0.1 7 0.53 0 32 6.22 Yes 69 0.74 No 0 0 No -31 0.5 No 39 60.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 31371198 + NR_110492 TUG1 1 1.63 0.61 30 4.86 82.97 27 5.05 No 51 1.76 Yes 26 0.86 Yes -26 0.8 Yes 44 84.55 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 3000807 + NM_003324 TULP3 1 2.27 0.22 14 9.41 86.54 18 5.13 No 13 0.79 Yes 0 0 No -25 0.97 Yes 45 96.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158834568 + NM_001007466 TULP4 1 4.18 1.11 50 6.78 72.74 23 7.16 Yes 71 0.46 No 0 0 No -27 0.59 No 43 62.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 158852615 + NM_001007466 TULP4 1 2.99 1.07 46 5.9 84.46 26 5 No 33 -1.8 No 0 0 No -22 0.57 No 48 48.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 158863742 + NM_001007466 TULP4 1 1.63 0.58 33 6.12 82.33 89 9.63 Yes 76 0.84 Yes 0 0 No -30 0.84 Yes 40 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158882596 + NM_001007466 TULP4 1 0.46 0.13 8 1.5 79.29 24 7.07 Yes 11 2.56 Yes 0 0 No -23 0.79 Yes 47 93.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158886381 + NM_001007466 TULP4 1 0.4 0.17 11 9.27 88.14 22 5.26 No 68 1.74 Yes 0 0 No -21 0.65 No 49 72.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 158886499 + NM_001007466 TULP4 1 0.31 0.13 9 3.03 69.91 69 10.56 Yes 14 0.75 No 0 0 No -30 0.56 No 44 52.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 158897465 + NM_001007466 TULP4 1 1.94 0.78 38 9.15 95.38 23 4.9 No 14 0.73 No 0 0 No -26 0.28 No 48 55.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 158911067 + NM_001007466 TULP4 1 0.64 0.25 15 9.41 85.32 19 6.16 Yes 6 0.12 No 0 0 No -18 0.83 Yes 52 89.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 158913981 + NM_001007466 TULP4 1 1.49 0.54 26 7.55 82.26 21 6.51 Yes 74 -6.06 No 0 0 No -20 0.53 No 50 69.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 50363636 - NM_007275 TUSC2 1 0.19 0.29 15 0.44 69.64 17 4.19 No -1 1.11 Yes 23 0.95 Yes -16 0.72 Yes 54 61.32 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 50364656 - NM_007275 TUSC2 1 0.42 0.42 22 8.34 77.45 23 6 Yes 10 0.78 Yes 22 0.8 Yes -22 0.95 Yes 48 89.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 62342602 - NM_022830 TUT1 1 9.78 5.42 71 9.61 94.25 21 6.4 Yes 8 1.75 Yes 0 0 No -20 0.87 Yes 50 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62344431 - NM_022830 TUT1 1 0.23 0.13 9 6.54 92.39 28 6.82 Yes 73 1.78 Yes 0 0 No -27 0.9 Yes 43 92.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62346380 - NM_022830 TUT1 1 0.13 0.11 8 9.39 90.26 23 5.91 Yes 47 0.63 No 0 0 No -22 0.91 Yes 48 85.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62348642 - NM_022830 TUT1 1 0.18 0.1 7 7.17 72.46 26 5.95 Yes 61 2.27 Yes 0 0 No -25 0.51 No 45 79.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 18706469 + NM_001316920 TVP23B 1 0.35 0.42 23 6.43 89 21 4.23 No 8 0.81 Yes 0 0 No -24 0.9 Yes 46 90.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 44196156 - NM_002822 TWF1 1 0.4 0.11 7 6.89 86.31 22 6.06 Yes 43 0.64 No 0 0 No -22 0.44 No 48 40.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 44198044 - NM_002822 TWF1 1 5.3 1.53 57 9.19 89.93 32 6.62 Yes 19 1.43 Yes 31 0.87 Yes -31 0.78 Yes 39 80.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 44199441 - NM_002822 TWF1 1 2.53 0.44 19 8.43 80.84 14 5.31 No 14 0.82 Yes 26 0.92 Yes -26 0.66 No 44 84.18 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 44199689 - NM_002822 TWF1 1 1.43 0.24 15 7.35 82.35 36 4.56 No 50 -0.13 No 25 0.77 Yes -25 0.48 No 45 60.91 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 44199806 - NM_002822 TWF1 1 2.27 0.44 21 8.96 80.56 31 5.93 Yes -3 0.11 No 30 0.59 Yes -30 0.79 Yes 40 79.26 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 52264084 - NM_007284 TWF2 1 0.18 0.33 19 -4.6 56.25 41 8.06 Yes 74 1.28 Yes 0 0 No -40 0.67 Yes 30 61.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52265221 - NM_007284 TWF2 1 0.03 0.11 7 5.13 74.38 24 6 Yes 31 1.39 Yes 0 0 No -29 0.47 No 47 60.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52266113 - NM_007284 TWF2 1 0.12 0.28 14 5.72 82.06 29 5.48 No 33 1.27 Yes 0 0 No -23 0.63 No 47 51.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52266134 - NM_007284 TWF2 1 0.91 1.74 53 -1.87 0 25 6.48 Yes 12 1.3 Yes 0 0 No -24 0.97 Yes 46 94.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52270290 - NM_007284 TWF2 1 0.11 0.15 9 5.41 90.92 28 5.11 No 74 1.77 Yes 0 0 No -27 0.8 Yes 43 64.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52270315 - NM_007284 TWF2 1 0.11 0.14 9 3.28 87.48 34 5.8 Yes 49 1.77 Yes 0 0 No -27 0.71 Yes 43 76.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 102749462 + NM_001163812 TWNK 1 2.92 1.42 46 8.25 91.21 34 4.46 No 18 -1.22 No 26 0.77 Yes -33 0.67 Yes 40 57.17 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr18 9340882 + NM_020648 TWSG1 1 0.39 0.33 18 3.67 73.23 34 5.74 Yes 9 0.1 No 0 0 No -33 0.55 No 37 50.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 9344765 + NM_020648 TWSG1 1 1.9 1.76 62 10.54 81.39 41 6.4 Yes 28 0.06 No 0 0 No -40 0.71 Yes 36 45.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 9365070 + NM_020648 TWSG1 1 0.34 0.28 14 3.09 82.51 24 4.85 No 63 1.31 Yes 0 0 No -29 0.6 No 41 50.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 9367485 + NM_020648 TWSG1 1 3.43 3.03 66 6.58 84.56 35 6.93 Yes 22 1.23 Yes 0 0 No -26 0.4 No 44 56.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 9372452 + NM_020648 TWSG1 1 0.46 0.43 24 4.63 80.84 41 7.05 Yes 28 0.89 Yes 0 0 No -40 0.7 Yes 49 63.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 9379227 + NM_020648 TWSG1 1 0.63 0.54 25 6.05 85.69 23 5.02 No 67 0.68 No 0 0 No -23 0.58 No 47 75.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 9388037 + NM_020648 TWSG1 1 1.2 1.18 45 9.05 93.67 28 8.22 Yes 64 0.85 Yes 27 0.53 Yes -27 0.79 Yes 43 67.24 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr18 9388994 + NM_020648 TWSG1 1 0.13 0.1 7 3.17 83.14 57 9.49 Yes 44 1.92 Yes 0 0 No -56 0.78 Yes 14 91.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 9396466 + NM_020648 TWSG1 1 0.18 0.14 8 8.03 80.4 25 4.6 No 12 -1.04 No 0 0 No -24 0.88 Yes 46 87.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 48096868 - NM_003328 TXK 1 7.7 0.21 8 7.21 81.1 35 8 Yes 22 0.93 Yes 0 0 No -34 0.96 Yes 36 97.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32645932 + NM_175852 TXLNA 1 2.34 2.51 65 1.78 82.97 22 5.2 No 9 0.72 No 0 0 No -21 0.78 Yes 49 77.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 32655659 + NM_175852 TXLNA 1 0.38 0.78 38 -3.83 0 19 6.42 Yes 6 1.69 Yes 0 0 No -33 0.69 Yes 37 73.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 32655721 + NM_175852 TXLNA 1 0.11 0.22 14 8.01 87.94 16 5.2 No 68 1.65 Yes 0 0 No -24 0.6 No 55 44.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 32655742 + NM_175852 TXLNA 1 0.13 0.26 16 2.36 68.67 19 4.49 No 24 1.39 Yes 0 0 No -18 0.52 No 52 76.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 32658231 + NM_175852 TXLNA 1 0.1 0.29 18 5.14 77.34 28 5.37 No 72 -5.35 No 30 0.94 Yes -27 0.4 No 43 60.87 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 16808508 + NM_018360 TXLNG 1 0.78 0.29 16 9.78 82.58 34 5.48 No 11 1.42 Yes 0 0 No -23 0.82 Yes 47 85.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 16811799 + NM_018360 TXLNG 1 1.93 0.6 27 4.46 0 37 7.18 Yes 24 0.85 Yes 0 0 No -44 0.37 No 34 49.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 16820988 + NM_018360 TXLNG 1 0.68 0.19 13 6.3 90.21 27 5.2 No 73 0.05 No 0 0 No -26 0.71 Yes 44 63.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 16830313 + NM_018360 TXLNG 1 0.42 0.14 9 7.82 85.4 22 5.74 Yes 9 1.27 Yes 0 0 No -21 0.88 Yes 49 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 16840567 + NM_018360 TXLNG 1 0.33 0.32 14 5.8 79.52 30 5.55 No 76 0.85 Yes 0 0 No -29 0.84 Yes 44 86.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 16842734 + NM_018360 TXLNG 1 0.17 0.14 10 4.95 75.39 29 4.47 No 67 -2.24 No 0 0 No -22 0.5 No 48 47.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 16847713 + NM_018360 TXLNG 1 0.36 0.25 14 -8.62 0 21 4.48 No 27 0.44 No 0 0 No -39 0.57 No 31 74.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 16855927 + NM_018360 TXLNG 1 0.27 0.22 14 8.96 82.49 25 6.38 Yes 28 1.1 Yes 0 0 No -24 0.62 No 43 62.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 16858567 + NM_018360 TXLNG 1 0.87 0.92 42 6.44 79.08 38 6.22 Yes 43 -2.13 No 0 0 No -30 0.6 No 32 56.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 113013731 - NM_001244938 TXN 1 0.02 0.58 30 3.2 0 15 4.58 No 37 0.63 No 0 0 No -38 0.6 No 32 69.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 113013761 - NM_001244938 TXN 1 0.02 0.61 27 0.96 70.5 20 5.49 No 7 0.63 No 25 0.78 Yes -26 0.56 No 44 58.09 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 36864761 - NM_012473 TXN2 1 0.12 0.64 33 3.48 0 28 6.86 Yes 32 1.22 Yes 0 0 No -27 0.82 Yes 43 81.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 36864765 - NM_012473 TXN2 1 0.03 0.15 10 3.83 88.13 24 6.59 Yes 28 1.24 Yes 23 0.76 Yes -23 0.79 Yes 47 76.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 36864765 - NM_012473 TXN2 1 0.04 0.18 10 3.83 88.13 24 6.59 Yes 28 1.24 Yes 23 0.76 Yes -23 0.79 Yes 47 76.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 36872913 - NM_012473 TXN2 1 0.04 0.18 8 -2.11 0 21 6.49 Yes 8 1.83 Yes 29 0.92 Yes -20 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr22 36873574 - NM_012473 TXN2 1 0.05 0.25 17 10.82 91.45 16 5.32 No 3 1.01 Yes 0 0 No -24 0.54 No 46 47.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 36876690 - NM_012473 TXN2 1 0.1 0.31 19 6 89.06 19 6.08 Yes 51 -2.75 No 0 0 No -18 0.71 Yes 52 73.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 36876796 - NM_012473 TXN2 1 1.42 4.31 70 7.86 83.58 29 4.59 No 70 0.88 Yes 22 0.93 Yes -28 0.74 Yes 42 70.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 36876835 - NM_012473 TXN2 1 3.94 11.78 72 10.91 92.86 30 5.74 Yes 31 0.87 Yes 29 0.87 Yes -29 0.87 Yes 41 88.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 36877096 - NM_012473 TXN2 1 0.06 0.18 12 3.21 76.4 28 7.59 Yes 15 1.05 Yes 0 0 No -27 0.47 No 43 58.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 11773690 - NM_001303447 TXNDC11 1 0.03 0.11 7 4.54 0 40 8.5 Yes 27 1.89 Yes 0 0 No -39 0.85 Yes 31 91.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11783214 - NM_001303447 TXNDC11 1 0.04 0.13 8 4.91 75.64 19 5.7 Yes 6 1.03 Yes 0 0 No -18 0.47 No 52 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 11820035 - NM_001303447 TXNDC11 1 0.32 1.28 40 -1.75 66.66 43 6.27 Yes 23 1.21 Yes 0 0 No -35 0.82 Yes 35 81.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 11830008 - NM_001303447 TXNDC11 1 0.13 0.18 12 5.91 92.04 12 5.1 No -1 0.67 No 23 0.46 Yes -19 0.49 No 51 72.33 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 134223390 + NM_024715 TXNDC15 1 0.25 0.19 10 1.3 0 9 3.87 No 56 0.91 Yes 26 0.64 Yes -32 0.63 No 38 67.46 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 134235184 + NM_024715 TXNDC15 1 0.12 0.21 11 -0.29 0 9 3.87 No 7 0.73 No 0 0 No -28 0.81 Yes 47 41.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 52921142 - NM_020784 TXNDC16 1 1.67 0.13 8 10.41 88.27 32 5.32 No 59 1.13 Yes 0 0 No -29 0.75 Yes 41 89.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 52929689 - NM_020784 TXNDC16 1 3.09 0.32 18 9.78 83.75 33 7.48 Yes 60 0.33 No 32 0.5 Yes -32 0.73 Yes 38 85.91 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 52930122 - NM_020784 TXNDC16 1 21.63 2.4 64 7.62 93.46 20 4.63 No 28 -1.45 No 0 0 No -24 0.8 Yes 51 62.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 52936886 - NM_020784 TXNDC16 1 0.55 0.11 7 -0.64 0 13 3.87 No 16 0.09 No 0 0 No -28 0.64 No 42 68.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 52939706 - NM_020784 TXNDC16 1 9.27 1.1 50 5.25 78.88 28 7.12 Yes 15 0.91 Yes 0 0 No -27 0.66 No 43 65.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 52943066 - NM_020784 TXNDC16 1 3.54 0.42 21 11.45 90.92 22 6.1 Yes 9 1.49 Yes 0 0 No -21 0.55 No 49 55.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 52957647 - NM_020784 TXNDC16 1 0.69 0.13 8 3.07 80.01 22 7.58 Yes 9 0.59 No 0 0 No -21 0.92 Yes 49 92.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 52972971 - NM_020784 TXNDC16 1 0.45 0.13 8 8.85 88.97 32 7.25 Yes 19 1.13 Yes 0 0 No -31 0.89 Yes 39 82.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 52978059 - NM_020784 TXNDC16 1 0.8 0.15 9 4.76 64.4 46 7.13 Yes 53 0.43 No 0 0 No -29 0.64 No 41 81.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 52985997 - NM_020784 TXNDC16 1 7.34 1.57 50 7.51 80.35 23 4.85 No 25 0.91 Yes 0 0 No -22 0.93 Yes 48 92.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 6546236 + NM_032731 TXNDC17 1 0.07 0.21 9 3.92 72.16 27 4.74 No -1 1.33 Yes 26 0.76 Yes -26 0.93 Yes 44 96.43 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 6546247 + NM_032731 TXNDC17 1 0.08 0.25 12 -14.63 0 16 4.12 No 10 1.32 Yes 26 0.76 Yes -37 0.86 Yes 33 70.99 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 7909070 - NM_030810 TXNDC5 1 0.04 0.38 18 8.38 86.79 43 6.07 Yes 76 -2.18 No 0 0 No -42 0.61 No 28 76.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 99937943 - NM_005783 TXNDC9 1 0.17 0.28 13 7.31 86.86 28 6.56 Yes 15 0.61 No 0 0 No -27 0.79 Yes 43 85.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 54270284 - NM_004786 TXNL1 1 0.87 4.13 71 2.59 0 21 6 Yes 46 1.31 Yes 0 0 No -30 0.55 No 40 57.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 54272616 - NM_004786 TXNL1 1 0.1 0.49 27 11.12 92.55 26 6.71 Yes 13 1.52 Yes 0 0 No -25 0.6 No 45 76.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 54277392 - NM_004786 TXNL1 1 0.03 0.13 7 3.2 82.87 18 6.51 Yes 5 0.13 No 0 0 No -38 0.44 No 32 66.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 54278327 - NM_004786 TXNL1 1 0.07 0.31 18 -11.4 0 31 6.23 Yes 72 -3.07 No 0 0 No -30 0.44 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 54281229 - NM_004786 TXNL1 1 0.17 0.69 30 2.34 83.78 29 6.67 Yes 16 1.32 Yes 0 0 No -28 0.46 No 42 67.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 54281768 - NM_004786 TXNL1 1 0.1 0.51 27 1.08 71.66 49 7.75 Yes 36 0.26 No 0 0 No -28 0.4 No 22 56.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 54293498 - NM_004786 TXNL1 1 0.3 1.28 51 2.42 67.64 92 9.21 Yes 19 1.07 Yes 31 0.74 Yes -31 0.82 Yes 39 81.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 54293688 - NM_004786 TXNL1 1 0.05 0.17 10 -3.94 0 20 5.9 Yes 7 0.25 No 0 0 No -24 0.42 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 54301212 - NM_004786 TXNL1 1 0.12 0.31 15 4.74 84.41 31 6.59 Yes 18 1.1 Yes 0 0 No -30 0.7 Yes 40 80.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 77736788 - NM_001305564 TXNL4A 1 0.6 4.51 68 7.15 82.37 22 5.94 Yes 9 1.59 Yes 21 0.9 Yes -21 0.64 No 49 63.07 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 72119075 - NM_001324355 TXNL4B 1 7.6 5.14 71 7.86 89.39 24 5.47 No 11 0.49 No 0 0 No -26 0.75 Yes 44 81.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 72119356 - NM_001324355 TXNL4B 1 0.28 0.22 12 7.8 88.21 21 5.2 No 16 0.46 No 0 0 No -28 0.62 No 42 53.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 72120726 - NM_001324355 TXNL4B 1 0.14 0.11 7 -5.25 0 21 3.94 No 58 0.64 No 31 0.71 Yes -20 0.58 No 54 38.72 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 72121687 - NM_001324355 TXNL4B 1 0.3 0.26 15 2.62 79.84 32 6.62 Yes 30 -3.38 No 0 0 No -31 0.82 Yes 39 44.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 72127026 - NM_001324355 TXNL4B 1 0.72 0.31 18 8.81 84.65 38 5.55 No 20 0.24 No 0 0 No -32 0.74 Yes 38 74.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 104739796 + NM_001261445 TXNRD1 1 0.05 0.13 9 1.18 69.23 44 5.94 Yes 66 0.84 Yes 28 0.3 Yes -28 0.56 No 42 32.35 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 104739815 + NM_001261445 TXNRD1 1 0.05 0.13 8 2.77 79.89 25 3.8 No 17 1.09 Yes 0 0 No -29 0.68 Yes 41 80.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 104739819 + NM_001261445 TXNRD1 1 0.58 1.65 51 2.38 0 29 4.07 No 21 1.08 Yes 0 0 No -33 0.64 No 37 73.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 19882724 - NM_006440 TXNRD2 1 61.9 14.71 72 6.8 81.77 33 5.83 Yes 20 1.06 Yes 32 0.83 Yes -32 0.9 Yes 38 95.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 19882844 - NM_006440 TXNRD2 1 15.3 3.56 70 8.96 88.99 20 6.32 Yes -3 0.13 No 19 0.27 Yes -37 0.62 No 33 60.06 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 19893257 - NM_006440 TXNRD2 1 1.8 0.89 37 7.46 84.38 36 6.48 Yes 23 0.92 Yes 0 0 No -35 0.66 Yes 35 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19895942 - NM_006440 TXNRD2 1 0.71 0.36 16 8.62 91.24 55 8.72 Yes 10 1.07 Yes 0 0 No -22 0.56 No 48 38.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 19896293 - NM_006440 TXNRD2 1 0.27 0.14 7 3.22 87.2 17 4.6 No 4 0.74 No 0 0 No -20 0.63 No 50 39.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 19898113 - NM_006440 TXNRD2 1 0.27 0.13 8 10.23 87.97 34 5.22 No 6 1.26 Yes 0 0 No -33 0.73 Yes 37 72.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10461820 - NM_003331 TYK2 1 0.59 0.82 44 -0.42 0 10 4 No 46 0.25 No 0 0 No -28 0.75 Yes 23 42.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 10461862 - NM_003331 TYK2 1 0.32 0.44 20 1.74 69.09 37 6.19 Yes 68 0.81 Yes 28 0.7 Yes -32 0.49 No 38 57.36 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 10462161 - NM_003331 TYK2 1 0.71 0.97 43 4.19 83.57 21 5.57 Yes 8 0.82 Yes 26 0.86 Yes -26 0.61 No 44 77.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 10463751 - NM_003331 TYK2 1 0.11 0.24 12 4.16 73.39 27 5.64 Yes 34 0.96 Yes 0 0 No -46 0.81 Yes 24 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10463857 - NM_003331 TYK2 1 0.07 0.15 10 6.66 78.46 18 5.79 Yes 5 1.85 Yes 28 0.88 Yes -17 0.7 Yes 53 63.62 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 10464380 - NM_003331 TYK2 1 0.12 0.21 13 -0.53 0 33 5.66 Yes 62 -1.02 No 0 0 No -7 0.51 No 63 45.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10464606 - NM_003331 TYK2 1 0.53 0.79 33 2.39 82.4 22 4.38 No -4 0.34 No 0 0 No -21 0.69 Yes 49 70.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10465559 - NM_003331 TYK2 1 0.15 0.4 25 7.79 82.84 26 7.55 Yes 13 1.4 Yes 0 0 No -25 0.91 Yes 45 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10467392 - NM_003331 TYK2 1 0.26 0.68 33 -0.99 73.67 30 6.71 Yes 17 0.95 Yes 0 0 No -29 0.91 Yes 41 83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10469736 - NM_003331 TYK2 1 0.49 0.92 38 12.94 91.42 26 6.04 Yes 70 -2.87 No 0 0 No -25 0.67 Yes 45 89.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10470684 - NM_003331 TYK2 1 0.06 0.17 12 5.55 82.65 27 6.16 Yes 14 1.43 Yes 0 0 No -26 0.9 Yes 44 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10471750 - NM_003331 TYK2 1 1.26 2.96 63 13.64 94.54 27 7.68 Yes 14 2.49 Yes 26 0.96 Yes -26 0.88 Yes 44 94.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 10472513 - NM_003331 TYK2 1 2.41 6.89 72 8.07 84.69 26 5.39 No 13 0.44 No 0 0 No -25 0.91 Yes 45 73.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10472614 - NM_003331 TYK2 1 0.23 0.67 34 3.37 75.77 28 5.2 No 47 0.87 Yes 20 0.49 Yes -53 0.52 No 50 51 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 10472891 - NM_003331 TYK2 1 0.28 0.72 32 9.75 88.94 42 6.78 Yes 29 -0.92 No 20 0.38 Yes -20 0.53 No 50 48.33 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 10473007 - NM_003331 TYK2 1 0.56 1.61 58 5.88 82.25 31 6.08 Yes 68 -1.6 No 0 0 No -34 0.56 No 50 60.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 10473355 - NM_003331 TYK2 1 0.14 0.32 16 -0.54 0 15 4.58 No 43 0.39 No 25 0.92 Yes -55 0.51 No 15 58.96 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 10473589 - NM_003331 TYK2 1 0.06 0.13 8 3.61 81.37 23 3.47 No 67 -5.15 No 0 0 No -22 0.72 Yes 48 83.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10474786 - NM_003331 TYK2 1 0.06 0.14 7 6.8 90.36 39 6.12 Yes 62 0.65 No 0 0 No -31 0.72 Yes 39 69.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10474969 - NM_003331 TYK2 1 0.1 0.25 14 6.24 82.31 27 3.81 No 57 1.17 Yes 0 0 No -26 0.65 No 44 69.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 10475020 - NM_003331 TYK2 1 0.24 0.54 29 6.64 86.24 19 5.57 Yes 6 1.18 Yes 0 0 No -18 0.62 No 52 80.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 10475644 - NM_003331 TYK2 1 0.1 0.18 11 -10.38 0 18 4.12 No 71 -5.41 No 0 0 No -17 0.81 Yes 53 44.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 10476485 - NM_003331 TYK2 1 0.44 1.56 51 7.9 83.54 33 6.93 Yes 20 1.13 Yes 0 0 No -32 0.89 Yes 38 90.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10479048 - NM_003331 TYK2 1 0.34 0.9 38 5.69 86.43 54 7.07 Yes 58 2.24 Yes 27 0.78 Yes -27 0.86 Yes 28 73.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 10479440 - NM_003331 TYK2 1 0.43 1.19 48 7.63 86.23 16 5.98 Yes 3 1.18 Yes 26 0.95 Yes -22 0.49 No 48 71.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 10480551 - NM_003331 TYK2 1 0.12 0.32 19 5.01 80.64 22 7.28 Yes 9 1.23 Yes 0 0 No -21 0.87 Yes 49 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 10480554 - NM_003331 TYK2 1 0.28 0.78 33 6.67 83.82 19 7.07 Yes 6 1.26 Yes 18 0.57 Yes -18 0.58 No 52 87.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 10481490 - NM_003331 TYK2 1 0.15 0.4 22 7.5 86.73 36 4.09 No 23 0.14 No 0 0 No -26 0.88 Yes 44 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10486598 - NM_003331 TYK2 1 0.07 0.19 13 4.7 83.28 33 5.42 No NA NA NA 0 0 No -27 0.8 Yes 43 82.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 10490366 - NM_003331 TYK2 1 2.56 6.49 71 8.58 86.7 19 5 No 6 0.63 No 18 0.69 Yes -18 0.71 Yes 52 78.85 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 50965758 - NM_001953 TYMP 1 0.41 0.36 20 -0.45 65.74 37 5.98 Yes 34 0.44 No 0 0 No -36 0.49 No 56 32.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50965761 - NM_001953 TYMP 1 0.18 0.24 10 2.93 67.42 34 5.72 Yes 31 0.43 No 0 0 No -33 0.55 No 42 41.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50965979 - NM_001953 TYMP 1 0.15 0.19 12 7.86 84.69 31 6.14 Yes 18 1.17 Yes 0 0 No -25 0.56 No 45 63.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50966162 - NM_001953 TYMP 1 0.16 0.25 14 -5.12 0 22 4.64 No 17 1.11 Yes 22 0.93 Yes -21 0.57 No 59 34.19 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 50968045 - NM_001953 TYMP 1 0.25 0.15 9 4.47 76.2 13 5.18 No 67 0.42 No 0 0 No -24 0.37 No 50 27.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 50968161 - NM_001953 TYMP 1 30.19 16.9 72 -2.56 71.87 20 4.97 No 29 -2.13 No 25 0.34 Yes -41 0.79 Yes 61 40.13 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 50968177 - NM_001953 TYMP 1 1.53 0.72 34 -4.56 0 15 4 No 13 -1.13 No 25 0.34 Yes -25 0.7 Yes 45 50.47 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 50968184 - NM_001953 TYMP 1 1.28 0.47 25 -11.19 60.31 19 4.95 No 6 -0.68 No 18 0.68 Yes -18 0.76 Yes 52 36.98 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr18 669074 + NM_001071 TYMS 1 0.01 0.24 14 -18.96 0 42 8.28 Yes 29 0.93 Yes 0 0 No -41 0.8 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 66463840 + NR_134540 TYW1 1 0.14 0.11 8 2.17 71.77 27 5.57 Yes 41 0.52 No 0 0 No -26 0.96 Yes 44 94.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 66473675 + NR_134540 TYW1 1 0.35 0.15 9 -0.13 83.14 39 8.01 Yes 51 1.5 Yes 0 0 No -38 0.51 No 32 86.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 66478122 + NR_134540 TYW1 1 0.4 0.28 12 4.93 84.41 48 7.21 Yes 54 0.38 No 0 0 No -33 0.83 Yes 37 86.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 66478373 + NR_134540 TYW1 1 0.3 0.22 12 3.18 68.34 36 4.36 No 23 0.85 Yes 0 0 No -30 0.79 Yes 40 81.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66498434 + NR_134540 TYW1 1 0.3 0.17 8 8.51 79.63 26 6.08 Yes 13 1.35 Yes 0 0 No -25 0.76 Yes 45 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66537254 + NR_134540 TYW1 1 0.14 0.11 8 3.87 84.41 34 7.21 Yes 21 2.25 Yes 0 0 No -33 0.73 Yes 37 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66549813 + NR_134540 TYW1 1 1.09 0.46 21 6.89 88.03 21 5.19 No 66 0.77 No 0 0 No -20 0.47 No 50 67.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 66555786 + NR_134540 TYW1 1 0.33 0.15 9 12.51 97.59 27 8.36 Yes 14 1.12 Yes 0 0 No -26 0.96 Yes 44 97.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66616062 + NR_134540 TYW1 1 0.54 0.26 14 1.69 0 37 5.79 Yes 41 1.32 Yes 0 0 No -34 0.71 Yes 36 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66668730 + NR_134540 TYW1 1 3.14 0.89 35 12.29 92.93 31 7.09 Yes 26 1.4 Yes 0 0 No -30 0.82 Yes 40 79.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 66691369 + NR_134540 TYW1 1 0.33 0.1 7 8.81 72.36 23 5.87 Yes 10 0.57 No 0 0 No -22 0.79 Yes 48 87.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 72231912 - NM_001145440 TYW1B 1 2.54 0.22 13 5.24 86.67 27 5.17 No 55 1.33 Yes 0 0 No -26 0.63 No 44 60.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 75202470 + NR_027962 TYW3 1 0.27 0.6 30 7.1 87.25 28 4.49 No 63 -3.49 No 0 0 No -22 0.68 Yes 48 59.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 75205840 + NR_027962 TYW3 1 0.06 0.17 8 6.56 92.35 19 4.69 No 63 -4.4 No 0 0 No -23 0.44 No 38 79.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 75217032 + NR_027962 TYW3 1 0.39 1 39 8.23 85.71 25 5.25 No 12 1.02 Yes 0 0 No -24 0.66 No 42 73.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 75225354 + NR_027962 TYW3 1 0.28 0.71 30 2.97 0 41 7.15 Yes 48 0.38 No 0 0 No -31 0.63 No 39 77.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 75225513 + NR_027962 TYW3 1 0.38 1 38 9.29 86.62 22 5.74 Yes 70 0.81 Yes 0 0 No -21 0.54 No 49 71.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 75227541 + NR_027962 TYW3 1 0.55 1.58 51 6.92 81.25 34 5.53 No 2 2.26 Yes 0 0 No -33 0.58 No 37 63.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 200800706 - NM_001039693 TYW5 1 1.41 0.5 26 4.64 82.63 21 6.16 Yes 8 0.83 Yes 0 0 No -20 0.78 Yes 50 69.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 200804682 - NM_001039693 TYW5 1 1.86 0.63 32 9.53 86.12 40 11.55 Yes 27 2.09 Yes 0 0 No -39 0.49 No 31 75.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 44514004 - NM_006758 U2AF1 1 0.74 2.42 59 9.27 84.13 45 8.48 Yes 41 -1.48 No 0 0 No -36 0.57 No 26 65.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 44514898 - NM_006758 U2AF1 1 0.05 0.38 22 -6.72 0 27 5.74 Yes 46 0.44 No 0 0 No -27 0.81 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 44515161 - NM_006758 U2AF1 1 0.03 0.31 17 11 85.31 30 6.73 Yes 17 1.48 Yes 0 0 No -29 0.94 Yes 41 97.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 44515644 - NM_006758 U2AF1 1 0.07 0.74 30 -6.53 77.78 36 5.82 Yes 50 -3.44 No 0 0 No -26 0.73 Yes 44 44.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 44520651 - NM_006758 U2AF1 1 0.11 1 30 1.28 64.16 26 4.41 No 13 0.58 No 25 0.56 Yes -25 0.54 No 38 85.77 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr21 44521543 - NM_006758 U2AF1 1 30.01 226.06 72 14.16 92.45 19 6.32 Yes 41 0.21 No 31 0.24 Yes -30 0.3 No 40 52.12 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr21 44522195 - NM_006758 U2AF1 1 0.01 0.14 9 7.36 94.28 26 6.4 Yes 13 1.11 Yes 0 0 No -25 0.83 Yes 45 88.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 44525666 - NM_006758 U2AF1 1 0.21 1.43 49 8.72 87.15 19 3.56 No 6 0.55 No 0 0 No -22 0.72 Yes 48 66.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr21 44526938 - NM_006758 U2AF1 1 0.02 0.13 9 8.66 87.75 20 5.74 Yes 22 0.81 Yes 0 0 No -19 0.61 No 36 52.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36233521 - NR_110171 U2AF1L4 1 15.63 0.79 39 7.74 86.81 25 5.75 Yes 72 1.45 Yes 0 0 No -24 0.88 Yes 46 76.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36233521 - NR_110171 U2AF1L4 1 13.59 0.6 28 7.74 86.81 25 5.75 Yes 72 1.45 Yes 0 0 No -24 0.88 Yes 46 76.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36235124 - NR_110171 U2AF1L4 1 0.65 0.18 10 0.97 69.91 27 4.97 No 14 0.64 No 0 0 No -26 0.9 Yes 44 90.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36235442 - NR_110171 U2AF1L4 1 4.07 0.65 15 9.21 80.95 28 6.86 Yes 15 1.59 Yes 27 0.88 Yes -27 0.69 Yes 43 60.77 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 56170227 + NM_007279 U2AF2 1 0.92 3.54 70 6.44 86.03 23 6.21 Yes -3 0.63 No 22 0.58 Yes -22 0.72 Yes 45 70.68 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 56171674 + NM_007279 U2AF2 1 0.02 0.13 7 8.67 79.76 90 9.52 Yes 44 2.13 Yes 0 0 No -32 0.9 Yes 38 94.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56173136 + NM_007279 U2AF2 1 1.57 8.67 72 6.85 80.2 29 5.52 No 16 -0.82 No 28 0.63 Yes -28 0.79 Yes 42 82.2 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 56175028 + NM_007279 U2AF2 1 0.03 0.17 11 7.78 87.32 18 6.24 Yes 69 1.97 Yes 0 0 No -27 0.6 No 53 66.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 56180071 + NM_007279 U2AF2 1 0.04 0.32 16 4.4 75.94 22 6 Yes 57 0.75 No 0 0 No -21 0.71 Yes 49 72.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142731046 + NM_001320222 U2SURP 1 0.04 0.11 7 0.62 0 38 7.03 Yes 44 0.27 No 42 0.13 Yes -35 0.49 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 142731060 + NM_001320222 U2SURP 1 0.12 0.32 18 1.17 0 11 7.62 Yes 58 0.27 No 42 0.13 Yes -39 0.43 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 142735668 + NM_001320222 U2SURP 1 0.03 0.13 7 -0.58 66.98 16 4.64 No 52 1.22 Yes 23 0.74 Yes -20 0.4 No 50 15.42 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 142735686 + NM_001320222 U2SURP 1 2.58 9.22 71 -1.91 68.36 27 4.66 No 70 1.22 Yes 0 0 No -26 0.64 No 50 57.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 142747328 + NM_001320222 U2SURP 1 0.07 0.19 13 -11.46 0 23 6.22 Yes 4 1.05 Yes 24 0.65 Yes -22 0.5 No 47 33.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 142751629 + NM_001320222 U2SURP 1 0.09 0.25 13 -0.39 0 22 5.13 No 24 0.43 No 0 0 No -29 0.93 Yes 41 92.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 162538071 + NM_001324113 UAP1 1 0.22 0.25 15 12.04 94.71 38 4.73 No 46 -1.59 No 0 0 No -24 0.63 No 36 59.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 162559838 + NM_001324113 UAP1 1 0.09 0.11 7 11.72 95.65 36 7.32 Yes 23 1.65 Yes 0 0 No -35 0.69 Yes 35 75.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 139975023 + NM_207309 UAP1L1 1 0.76 0.15 11 4.9 70.72 26 5.66 Yes 29 -1.53 No 0 0 No -25 0.89 Yes 45 89.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 47055754 + NM_003334 UBA1 1 0.09 0.31 18 8.26 75.89 24 5.48 No 63 1.61 Yes 0 0 No -23 0.86 Yes 47 83.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47055795 + NM_003334 UBA1 1 0.03 0.11 7 4.19 70.72 26 7.07 Yes 13 2.48 Yes 0 0 No -25 0.88 Yes 45 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47056345 + NM_003334 UBA1 1 0.54 1.75 55 2.95 80.85 33 5.83 Yes 20 1.68 Yes 0 0 No -32 0.81 Yes 38 91.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47056348 + NM_003334 UBA1 1 0.08 0.28 15 3.96 70.44 36 6.08 Yes 23 1.69 Yes 0 0 No -35 0.72 Yes 35 88.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47057565 + NM_003334 UBA1 1 0.06 0.22 15 0.83 71.24 34 5.22 No 24 -3.54 No 26 0.74 Yes -26 0.57 No 44 68.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 47057707 + NM_003334 UBA1 1 0.44 1.42 49 7.01 84.34 24 6.75 Yes 11 0.41 No 23 0.75 Yes -23 0.59 No 47 75.15 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chrX 47057784 + NM_003334 UBA1 1 0.18 0.57 31 9.03 87.5 28 4.09 No 3 0.59 No 0 0 No -27 0.57 No 43 60.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 47057925 + NM_003334 UBA1 1 0.21 0.68 35 9.44 94.08 36 5.3 No 29 1.68 Yes 0 0 No -25 0.84 Yes 45 83.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47059808 + NM_003334 UBA1 1 0.04 0.1 7 -1.08 0 16 4.12 No 53 -5.06 No 0 0 No -24 0.8 Yes 46 73.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 47062538 + NM_003334 UBA1 1 0.03 0.13 8 -0.25 0 9 3.87 No 19 2.53 Yes 0 0 No -31 0.94 Yes 39 93.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47070054 + NM_003334 UBA1 1 0.03 0.15 8 3.76 83.42 21 4.53 No 1 1.12 Yes 0 0 No -20 0.7 Yes 50 90.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47073939 + NM_003334 UBA1 1 0.02 0.17 9 7.03 0 32 8.75 Yes 19 1.83 Yes 0 0 No -31 0.79 Yes 39 86.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 34920997 + NM_005499 UBA2 1 4.04 10.03 72 8.11 83.54 26 6.93 Yes 13 1.17 Yes 25 0.86 Yes -25 0.65 No 45 75.28 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 34921004 + NM_005499 UBA2 1 0.04 0.13 9 -0.05 0 15 4 No 20 1.15 Yes 0 0 No -32 0.65 No 38 75.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 34922747 + NM_005499 UBA2 1 0.08 0.29 16 -2.7 0 15 3.91 No 73 -5.92 No 24 0.92 Yes -24 0.53 No 55 38.18 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 34925205 + NM_005499 UBA2 1 0.03 0.11 8 8.98 91.26 25 7.21 Yes 12 1.32 Yes 0 0 No -24 0.94 Yes 46 94.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 34934752 + NM_005499 UBA2 1 0.06 0.26 18 -1.09 0 23 5.19 No 53 0.51 No 0 0 No -22 0.63 No 48 66.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 34934796 + NM_005499 UBA2 1 0.27 1.15 48 2.47 83.68 23 4.69 No 7 -2.1 No 0 0 No -22 0.88 Yes 48 94.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 34941130 + NM_005499 UBA2 1 0.03 0.17 10 6.9 75.47 27 6.32 Yes 14 1.68 Yes 25 0.88 Yes -26 0.69 Yes 44 76.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 34945393 + NM_005499 UBA2 1 0.08 0.18 12 1.54 75.72 44 6.16 Yes 54 1.38 Yes 0 0 No -28 0.7 Yes 42 36.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 34951378 + NM_005499 UBA2 1 0.08 0.29 19 1.49 0 36 8.56 Yes 23 0.99 Yes 0 0 No -35 0.83 Yes 35 84.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 69105073 - NM_198195 UBA3 1 0.04 0.1 7 2.7 72.75 42 6.17 Yes 6 0.83 Yes 25 0.92 Yes -39 0.66 No 31 60.34 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 69105380 - NM_198195 UBA3 1 0.08 0.22 11 4.44 87.99 16 4.69 No 67 0.67 No 0 0 No -24 0.79 Yes 46 83.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 69105393 - NM_198195 UBA3 1 0.12 0.35 20 2.17 68.74 12 3.64 No 54 0.67 No 0 0 No -24 0.7 Yes 46 78.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 69105801 - NM_198195 UBA3 1 0.54 1.15 38 4.91 70.58 25 6.52 Yes 50 0.02 No 0 0 No -28 0.33 No 46 46.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 69111076 - NM_198195 UBA3 1 1.38 2.57 63 0.38 76.11 58 9.03 Yes 42 1.3 Yes 0 0 No -57 0.68 Yes 16 60.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 69111293 - NM_198195 UBA3 1 0.59 1.13 49 5.14 80.43 35 6.81 Yes 68 0.54 No 0 0 No -34 0.6 No 36 83.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 69129305 - NM_198195 UBA3 1 829.57 80.9 72 13.26 87.82 26 6.63 Yes 13 2.71 Yes 25 0.97 Yes -25 0.78 Yes 45 94.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 132387685 + NM_001320210 UBA5 1 0.05 0.1 7 2.74 69.5 32 5.72 Yes 67 0.39 No 0 0 No -31 0.85 Yes 39 80.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 132390599 + NM_001320210 UBA5 1 0.08 0.19 12 -0.9 0 32 6.49 Yes 23 1 Yes 24 0.89 Yes -41 0.45 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 132394711 + NM_001320210 UBA5 1 0.29 0.35 20 4.16 74.29 14 5.29 No 1 0.29 No 0 0 No -26 0.7 Yes 44 52.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 18684344 + NM_001321021 UBA52 1 0 0.21 13 3.44 69.24 44 6.71 Yes 31 1.68 Yes 0 0 No -43 0.74 Yes 27 91.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18684368 + NM_001321021 UBA52 1 0.01 0.42 21 6.84 83.76 28 4.17 No 55 1.69 Yes 0 0 No -27 0.77 Yes 43 79.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18685542 + NM_001321021 UBA52 1 0.01 0.47 26 5.21 77.26 9 5.2 No 73 -3.59 No 0 0 No -22 0.47 No 47 73.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 18685635 + NM_001321021 UBA52 1 0.01 0.6 31 -11.45 59.59 10 5.74 Yes -3 0.54 No 0 0 No -26 0.53 No 61 54.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 18685639 + NM_001321021 UBA52 1 0 0.24 13 -9.59 0 14 3.99 No 1 0.27 No 30 0.88 Yes -13 0.57 No 57 65.1 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 18685651 + NM_001321021 UBA52 1 0.04 2.42 61 -6.86 0 22 4.58 No 56 -2.32 No 30 0.88 Yes -21 0.56 No 45 52.31 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 18685681 + NM_001321021 UBA52 1 0.01 0.54 28 -7.13 71.37 33 6.24 Yes 20 1.05 Yes 0 0 No -32 0.94 Yes 38 93.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 18685741 + NM_001321021 UBA52 1 0.03 1.75 50 6.3 84.78 18 4.52 No 5 0.79 Yes 0 0 No -21 0.48 No 49 66.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 18687812 + NM_001321021 UBA52 1 0.01 0.44 23 11.43 95.65 31 6.88 Yes 49 -1.6 No 28 0.8 Yes -28 0.92 Yes 42 95.17 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 18685909 + NM_001321021 UBA52 1 0 0.14 7 -2.64 64.11 27 7.21 Yes 56 2.06 Yes 29 0.83 Yes -26 0.92 Yes 44 63.51 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 18685912 + NM_001321021 UBA52 1 0.03 1.72 50 -5.05 58.64 30 7.41 Yes 59 2.05 Yes 29 0.83 Yes -29 0.87 Yes 41 30.22 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 68484783 - NM_018227 UBA6 1 2.57 4.99 71 6.9 84.83 20 6.18 Yes 7 0.83 Yes 0 0 No -19 0.9 Yes 51 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68490472 - NM_018227 UBA6 1 0.27 0.31 18 8.01 90.68 27 4.75 No 1 0.26 No 0 0 No -26 0.89 Yes 44 85.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 68490834 - NM_018227 UBA6 1 0.54 0.99 39 0.94 0 18 4.58 No 57 0.5 No 0 0 No -20 0.68 Yes 50 60.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 68494824 - NM_018227 UBA6 1 1.19 1.9 56 5.9 81.85 33 5.08 No 46 0.55 No 0 0 No -32 0.82 Yes 38 75.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 68499189 - NM_018227 UBA6 1 0.17 0.21 12 3.05 72.94 29 5.23 No 16 1.05 Yes 0 0 No -28 0.81 Yes 42 87.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68506967 - NM_018227 UBA6 1 0.11 0.21 14 3.82 81.78 26 5.46 No 42 -4.49 No 22 0.76 Yes -25 0.78 Yes 45 75.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 68511288 - NM_018227 UBA6 1 0.07 0.11 7 4.6 84.17 27 5.19 No 14 0.6 No 0 0 No -26 0.79 Yes 17 54.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 68526626 - NM_018227 UBA6 1 0.57 0.65 30 9.47 87.65 51 6.21 Yes 8 1.32 Yes 0 0 No -30 0.45 No 40 40.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 68527980 - NM_018227 UBA6 1 1.48 2.99 64 -4.27 78.87 24 4.97 No 60 0.82 Yes 24 0.62 Yes -23 0.6 No 47 78.4 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr4 68528892 - NM_018227 UBA6 1 0.07 0.13 8 3.98 73.91 27 5.39 No 14 0.44 No 0 0 No -26 0.93 Yes 44 93.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 68532427 - NM_018227 UBA6 1 0.2 0.36 22 7.36 87.44 19 8.06 Yes 6 1.84 Yes 0 0 No -18 0.76 Yes 52 89.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68536310 - NM_018227 UBA6 1 0.07 0.13 8 -13.32 0 25 4.92 No 12 0.87 Yes 0 0 No -24 0.47 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 68539127 - NM_018227 UBA6 1 0.18 0.36 22 2.82 0 33 8.01 Yes 20 1.46 Yes 0 0 No -32 0.78 Yes 38 84.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68539460 - NM_018227 UBA6 1 0.14 0.25 13 4.8 83.15 25 4.98 No 63 0.42 No 0 0 No -24 0.84 Yes 46 78.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 68544248 - NM_018227 UBA6 1 0.29 0.56 27 1.57 0 36 7.99 Yes 23 1.29 Yes 0 0 No -30 0.87 Yes 40 90.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 68562394 - NM_018227 UBA6 1 0.45 0.36 22 6.44 77.65 25 6.4 Yes 39 1.33 Yes 0 0 No -27 0.31 No 45 19.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 68579175 + NR_015439 UBA6-AS1 1 2.57 0.64 33 7.49 88.02 14 6.23 Yes 1 0.53 No 0 0 No -22 0.57 No 48 77.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 68582640 + NR_015439 UBA6-AS1 1 1.25 0.35 20 5.47 85.04 27 3.89 No 0 0.39 No 26 0.81 Yes -26 0.62 No 44 62.18 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 68587194 + NR_015439 UBA6-AS1 1 0.72 0.13 7 11.43 91 19 5.74 Yes 6 1.92 Yes 18 0.8 Yes -18 0.8 Yes 52 86.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 49843425 - NM_003335 UBA7 1 0.19 0.17 9 -2.25 0 9 3.87 No 9 2.24 Yes 0 0 No -21 0.65 No 49 67.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49845384 - NM_003335 UBA7 1 0.18 0.25 16 4.23 73.38 28 6.3 Yes 54 1.55 Yes 25 0.6 Yes -28 0.38 No 44 30.81 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 49846889 - NM_003335 UBA7 1 0.37 0.29 16 -7.34 0 16 4.24 No 26 0.77 Yes 0 0 No -30 0.44 No 40 54.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49846917 - NM_003335 UBA7 1 0.11 0.11 7 -8.44 0 11 4.12 No 67 0.86 Yes 24 0.83 Yes -10 0.38 No 60 58.95 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 49847805 - NM_003335 UBA7 1 0.57 0.31 19 -0.91 0 16 4.12 No 3 0.09 No 25 0.97 Yes -15 0.69 Yes 55 39.19 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 49847966 - NM_003335 UBA7 1 2.96 1.74 57 5.23 0 21 4.13 No 47 1.16 Yes 0 0 No -20 0.95 Yes 50 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49847977 - NM_003335 UBA7 1 1.45 0.81 36 -2.63 0 15 2.81 No 36 1.15 Yes 0 0 No -27 0.68 Yes 43 29.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 49848262 - NM_003335 UBA7 1 0.13 0.1 7 -8.76 0 25 6.47 Yes 12 2.45 Yes 0 0 No -24 0.84 Yes 46 78.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49848514 - NM_003335 UBA7 1 0.83 0.58 27 0.66 0 14 4.45 No 69 -4.91 No 0 0 No -18 0.7 Yes 44 56.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 49848903 - NM_003335 UBA7 1 1.44 0.79 36 5.57 81.72 25 5.57 Yes 25 -3.12 No 18 0.65 Yes -24 0.92 Yes 46 92.67 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 49849447 - NM_003335 UBA7 1 0.24 0.35 20 -6 65.62 22 4.9 No 9 0.98 Yes 0 0 No -21 0.9 Yes 49 78.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49849462 - NM_003335 UBA7 1 0.2 0.29 16 -6.33 0 15 4.58 No 74 -5.27 No 18 0.93 Yes -6 0.53 No 64 38.57 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 49849474 - NM_003335 UBA7 1 0.08 0.11 7 2.09 64.93 18 4.69 No 62 -4.51 No 18 0.93 Yes -25 0.28 No 58 55.22 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 49849992 - NM_003335 UBA7 1 0.27 0.17 10 -9.41 0 19 4.57 No 67 0.77 Yes 22 0.95 Yes -7 0.29 No 17 48.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 49850799 - NM_003335 UBA7 1 0.44 0.19 13 1.31 0 21 5.2 No 30 0.7 No 0 0 No -42 0.45 No 28 64.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 49850839 - NM_003335 UBA7 1 0.33 0.19 12 0.39 88 21 3.81 No 58 -3.09 No 24 0.92 Yes -20 0.41 No 49 48.94 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 138830126 - NM_016172 UBAC1 1 0.57 0.53 29 8.33 92.16 18 4.69 No NA NA NA 0 0 No -17 0.63 No 53 68.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 138832092 - NM_016172 UBAC1 1 0.39 0.31 17 7.04 93.16 21 3.7 No 4 0.5 No 0 0 No -20 0.73 Yes 50 42.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 138834136 - NM_016172 UBAC1 1 0.19 0.14 9 9.05 84.87 36 5.92 Yes 69 1.85 Yes 29 0.29 Yes -35 0.54 No 38 66.88 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 138838902 - NM_016172 UBAC1 1 0.15 0.19 11 9.14 88.1 19 5 No 6 0.46 No 0 0 No -19 0.83 Yes 51 82.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 138839777 - NM_016172 UBAC1 1 0.09 0.13 8 7.55 80.67 45 6.84 Yes 32 1.76 Yes 27 0.78 Yes -33 0.8 Yes 37 86.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 100021616 + NM_001144072 UBAC2 1 0.59 0.17 10 7.43 93.01 20 5.04 No 75 0.6 No 0 0 No -27 0.47 No 43 65.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 100029171 + NM_001144072 UBAC2 1 1.39 0.39 22 8.31 80.92 23 5.35 No 39 0.22 No 0 0 No -22 0.83 Yes 48 73.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 99853682 + NM_001144072 UBAC2 1 2.36 0.68 29 7.7 90.82 37 5.58 Yes 24 2.07 Yes 23 0.94 Yes -23 0.83 Yes 47 77.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 99883687 + NM_001144072 UBAC2 1 1.6 0.44 26 4.74 84.41 68 7.78 Yes 62 0.81 Yes 0 0 No -32 0.72 Yes 38 72.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 99896168 + NM_001144072 UBAC2 1 0.85 0.36 20 8.94 81.05 15 5.48 No 44 0.51 No 0 0 No -26 0.92 Yes 44 88.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 99981395 + NM_001144072 UBAC2 1 0.92 0.51 25 9.08 89.47 18 6.11 Yes 5 1.47 Yes 0 0 No -25 0.78 Yes 45 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 99992688 + NM_001144072 UBAC2 1 1.66 0.86 35 10.35 90.48 22 7.85 Yes 9 0.48 No 0 0 No -21 0.52 No 49 65.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 4659910 - NM_145253 UBALD1 1 7.42 1.51 51 7.54 79.77 30 8.99 Yes 17 2.34 Yes 29 0.95 Yes -29 0.75 Yes 41 71.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 4660553 - NM_145253 UBALD1 1 0.54 0.17 11 2.82 0 28 5.57 Yes 15 0.12 No 0 0 No -27 0.88 Yes 43 80.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4660658 - NM_145253 UBALD1 1 0.65 0.25 13 4.04 77.75 19 5.22 No 6 1.8 Yes 18 0.78 Yes -18 0.6 No 39 53.53 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 74263921 + NM_182565 UBALD2 1 0.03 0.11 7 3.45 85.02 16 7.33 Yes 3 1.16 Yes 0 0 No -26 0.52 No 44 59.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 34235850 + NM_001171204 UBAP1 1 0.98 0.68 28 4.08 83 30 7.2 Yes 17 1.23 Yes 0 0 No -29 0.9 Yes 41 89.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33928021 - NM_018449 UBAP2 1 1.2 1.26 42 12.14 87.61 25 5.57 Yes 74 0.2 No 26 0.77 Yes -24 0.6 No 46 76.83 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 33928611 - NM_018449 UBAP2 1 1.12 1.22 47 8.7 94.61 35 5.93 Yes 3 1.01 Yes 27 0.62 Yes -34 0.68 Yes 36 64.33 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 33941702 - NM_018449 UBAP2 1 0.08 0.13 7 4.2 83.3 23 4.9 No 62 1.15 Yes 0 0 No -22 0.71 Yes 48 61.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 33941780 - NM_018449 UBAP2 1 0.2 0.29 16 5.89 84.79 15 6.7 Yes 67 0.1 No 0 0 No -24 0.63 No 46 51.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33942143 - NM_018449 UBAP2 1 0.17 0.25 14 2.24 80.12 20 7.14 Yes 7 1.36 Yes 0 0 No -19 0.62 No 51 82.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 33942146 - NM_018449 UBAP2 1 0.22 0.32 20 3.6 85.02 17 6.93 Yes 4 1.39 Yes 0 0 No -29 0.63 No 43 65.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 33943647 - NM_018449 UBAP2 1 0.12 0.15 9 8.44 80.34 25 7.07 Yes 47 1.65 Yes 0 0 No -24 0.83 Yes 46 68.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 33956924 - NM_018449 UBAP2 1 0.19 0.25 14 8.13 87 20 5.15 No 71 0.94 Yes 0 0 No -24 0.41 No 47 72.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 33957080 - NM_018449 UBAP2 1 0.51 0.61 28 4.09 0 29 8.06 Yes 16 1.49 Yes 0 0 No -32 0.59 No 38 74.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 33971736 - NM_018449 UBAP2 1 2.12 2.53 59 5.04 86.66 27 5.08 No 65 0.59 No 0 0 No -26 0.65 No 45 30.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33982403 - NM_018449 UBAP2 1 0.12 0.13 8 7.08 83.31 25 5.45 No 65 0.54 No 0 0 No -24 0.5 No 35 58.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 33983440 - NM_018449 UBAP2 1 0.1 0.11 7 10.09 88.16 26 5.29 No 13 1.92 Yes 0 0 No -25 0.86 Yes 45 92.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33986832 - NM_018449 UBAP2 1 0.12 0.15 10 0.1 0 29 7.48 Yes 16 0.49 No 0 0 No -28 0.86 Yes 42 76.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33989141 - NM_018449 UBAP2 1 0.09 0.14 8 0.69 68.24 35 7.11 Yes 66 -4.83 No 20 0.89 Yes -27 0.36 No 36 61.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 34011663 - NM_018449 UBAP2 1 3.84 3.82 72 8.32 80.08 23 5.14 No 45 2.3 Yes 28 0.8 Yes -28 0.51 No 48 65.93 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 34013708 - NM_018449 UBAP2 1 0.24 0.24 15 3.66 80.12 20 7.11 Yes 7 1.16 Yes 0 0 No -19 0.72 Yes 51 89.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 34014624 - NM_018449 UBAP2 1 0.39 0.36 18 5.74 82.92 22 6.94 Yes 9 1.4 Yes 0 0 No -21 0.58 No 49 71.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 154213590 + NM_001330730 UBAP2L 1 0.08 0.38 25 3.04 0 59 7.6 Yes 53 0.79 Yes 0 0 No -52 0.37 No 18 53.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154214175 + NM_001330730 UBAP2L 1 1.48 4.96 69 3.71 60 27 6.28 Yes 14 1.71 Yes 0 0 No -26 0.81 Yes 44 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154214213 + NM_001330730 UBAP2L 1 0.03 0.11 7 2.88 76.79 32 5.58 Yes 52 1.7 Yes 0 0 No -31 0.8 Yes 39 74.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154227673 + NM_001330730 UBAP2L 1 0.04 0.13 7 7.61 78.2 20 5.34 No 3 1.31 Yes 0 0 No -19 0.62 No 40 63.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154227673 + NM_001330730 UBAP2L 1 0.09 0.28 15 7.61 78.2 20 5.34 No 3 1.31 Yes 0 0 No -19 0.62 No 40 63.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154228140 + NM_001330730 UBAP2L 1 0.74 2.28 62 -0.78 67.12 26 5.2 No 54 0.03 No 25 0.97 Yes -25 0.51 No 45 61.56 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 154229582 + NM_001330730 UBAP2L 1 0.05 0.21 11 8.55 88.24 26 5.65 Yes 75 2.24 Yes 0 0 No -25 0.82 Yes 45 75.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154229827 + NM_001330730 UBAP2L 1 0.06 0.24 15 -4.4 0 9 3.87 No 7 0.56 No 0 0 No -35 0.48 No 35 44.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154230485 + NM_001330730 UBAP2L 1 0.06 0.15 10 7.19 90.21 26 5.29 No 32 0.88 Yes 0 0 No -25 0.77 Yes 23 53.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 154231419 + NM_001330730 UBAP2L 1 0.13 0.38 18 2.95 62.94 47 6.95 Yes 62 1.07 Yes 25 0.69 Yes -42 0.57 No 28 74.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 154231437 + NM_001330730 UBAP2L 1 0.03 0.13 8 -0.13 0 24 5.13 No 19 1.13 Yes 25 0.69 Yes -23 0.69 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 154231482 + NM_001330730 UBAP2L 1 0.32 0.97 40 5.76 76.29 15 4.69 No 64 1.11 Yes 0 0 No -20 0.44 No 44 45.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154233441 + NM_001330730 UBAP2L 1 0.41 1.58 56 5.2 73.75 22 5.96 Yes 66 -1.39 No 0 0 No -22 0.83 Yes 48 72.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154234648 + NM_001330730 UBAP2L 1 0.07 0.15 8 9.72 83.39 46 6.23 Yes 11 0.8 Yes 0 0 No -23 0.92 Yes 47 90.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154235578 + NM_001330730 UBAP2L 1 76.78 176.28 72 10.1 88.17 31 6.63 Yes 18 0.45 No 30 0.66 Yes -30 0.72 Yes 40 72.54 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 154235582 + NM_001330730 UBAP2L 1 0.06 0.14 10 -4.89 0 35 6.85 Yes 22 0.43 No 0 0 No -34 0.68 Yes 36 76.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154241235 + NM_001330730 UBAP2L 1 42.87 52.56 72 0.97 72.82 42 7.54 Yes 29 2.03 Yes 38 0.77 Yes -41 0.68 Yes 29 92.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 125398312 - NM_021009 UBC 1 0.29 8.79 71 -0.92 0 12 4.24 No 27 1.01 Yes 30 0.74 Yes -39 0.81 Yes 31 86.65 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 125398370 - NM_021009 UBC 1 0.02 0.49 14 -0.39 0 15 3.87 No 50 0.23 No 0 0 No -31 0.56 No 39 59.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 125398376 - NM_021009 UBC 1 0.01 0.28 14 4.06 80.55 29 6.66 Yes 44 0.23 No 0 0 No -25 0.62 No 42 66.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118708870 + NM_003336 UBE2A 1 0.14 0.28 19 0.4 0 11 4 No NA NA NA 0 0 No -35 0.35 No 41 43.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118712568 + NM_003336 UBE2A 1 0.04 0.11 7 9.08 94.43 36 5.41 No 72 -3.94 No 0 0 No -22 0.58 No 48 65.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 118716559 + NM_003336 UBE2A 1 0.52 2.04 57 3.18 0 12 4.24 No 74 1.03 Yes 0 0 No -33 0.49 No 37 68.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 133712364 + NM_003337 UBE2B 1 0.96 1.93 63 1.55 0 29 5.63 Yes 74 0.58 No 0 0 No -28 0.92 Yes 42 92.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 133724042 + NM_003337 UBE2B 1 0.04 0.13 8 -2.49 0 19 4.47 No 36 0.42 No 18 0.89 Yes -48 0.39 No 52 63.64 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 133724235 + NM_003337 UBE2B 1 0.14 0.56 25 6.72 91.36 16 5.2 No 3 1.72 Yes 0 0 No -20 0.73 Yes 50 79.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 133724238 + NM_003337 UBE2B 1 0.18 0.72 35 4.43 79.75 19 5.48 No 6 1.71 Yes 0 0 No -23 0.64 No 47 78.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 133724663 + NM_003337 UBE2B 1 0.06 0.24 12 2.3 84.41 31 6.87 Yes 29 2.22 Yes 34 0.82 Yes -30 0.62 No 40 76.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr5 133724667 + NM_003337 UBE2B 1 1.69 6.88 69 3.28 0 35 7.09 Yes 33 2.21 Yes 34 0.82 Yes -34 0.59 No 36 77.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 44444028 + NM_181801 UBE2C 1 0.04 0.17 10 2.98 73.1 24 6.08 Yes 37 0.59 No 23 0.82 Yes -23 0.74 Yes 47 79.16 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 44444028 + NM_181801 UBE2C 1 0.95 4.03 67 2.98 73.1 24 6.08 Yes 37 0.59 No 23 0.82 Yes -23 0.74 Yes 47 79.16 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 44444450 + NM_181801 UBE2C 1 0.02 0.11 8 -1.7 70.61 19 5 No 51 0.52 No 25 0.88 Yes -54 0.25 No 12 28.44 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 60109444 + NM_003338 UBE2D1 1 0.22 0.18 11 7.56 90.19 24 4.25 No 3 0.65 No 0 0 No -21 0.71 Yes 49 45.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 60124917 + NM_003338 UBE2D1 1 0.17 0.31 16 8.66 84.83 18 6.27 Yes 5 0.92 Yes 0 0 No -26 0.44 No 49 45.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 60124993 + NM_003338 UBE2D1 1 0.12 0.24 16 1.46 69.19 28 7.4 Yes 15 1.36 Yes 0 0 No -27 0.97 Yes 43 97.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 60127724 + NM_003338 UBE2D1 1 0.55 1.01 40 6.32 78.82 50 6.88 Yes 55 1.4 Yes 0 0 No -38 0.54 No 32 76.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 138964997 + NM_181838 UBE2D2 1 0.77 0.15 10 6.5 85.67 34 8.12 Yes 21 1.78 Yes 0 0 No -33 0.92 Yes 37 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 138942086 + NM_181838 UBE2D2 1 1.79 0.33 20 9.44 93.22 18 5.66 Yes 5 1.77 Yes 0 0 No -17 0.55 No 53 81.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 138964997 + NM_181838 UBE2D2 1 0.52 0.13 9 6.5 85.67 34 8.12 Yes 21 1.78 Yes 0 0 No -33 0.92 Yes 37 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 138980406 + NM_181838 UBE2D2 1 0.04 0.15 10 -0.85 83.39 15 3.56 No 32 1.93 Yes 0 0 No -26 0.59 No 44 67.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 138994159 + NM_181838 UBE2D2 1 0.03 0.1 7 -3.66 0 13 6.05 Yes 0 1.54 Yes 23 0.76 Yes -18 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 138994336 + NM_181838 UBE2D2 1 0.1 0.56 29 8.38 87.68 20 5.75 Yes 74 0.96 Yes 0 0 No -19 0.7 Yes 51 66.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 138994423 + NM_181838 UBE2D2 1 0.05 0.38 23 -2.49 0 17 3.99 No 24 0.68 No 26 0.87 Yes -36 0.68 Yes 54 43.58 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 139002994 + NM_181838 UBE2D2 1 0.02 0.14 10 5.5 77.75 50 7.13 Yes 55 0.85 Yes 0 0 No -49 0.58 No 39 68.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 139004661 + NM_181838 UBE2D2 1 1.01 7.43 71 9.8 95.65 24 8.06 Yes 11 2.5 Yes 0 0 No -23 0.92 Yes 47 93.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 139005839 + NM_181838 UBE2D2 1 0.03 0.21 12 8.51 86.62 21 7.21 Yes 8 1.44 Yes 0 0 No -20 0.82 Yes 50 90.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 139006316 + NM_181838 UBE2D2 1 0.01 0.13 7 -1.86 62.27 44 5.59 Yes 7 1.93 Yes 26 0.85 Yes -23 0.83 Yes 47 83.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 103718609 - NM_181893 UBE2D3 1 0.01 0.21 12 -4.02 0 14 3.8 No 13 0.91 Yes 0 0 No -38 0.57 No 32 68.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 103720135 - NM_181893 UBE2D3 1 0.03 0.5 27 5.46 76.12 26 4.86 No 7 1.01 Yes 25 0.86 Yes -25 0.65 No 45 53.91 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 103720616 - NM_181893 UBE2D3 1 0.05 0.74 38 2.35 71.08 36 6.4 Yes 54 1.15 Yes 0 0 No -23 0.84 Yes 47 69.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 103720678 - NM_181893 UBE2D3 1 0.02 0.29 15 2.16 62.74 42 6.88 Yes 70 0.46 No 24 0.93 Yes -27 0.71 Yes 43 78.48 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 103722071 - NM_181893 UBE2D3 1 0.01 0.13 7 8.72 81.2 20 5.24 No 74 0.72 No 0 0 No -24 0.52 No 46 63.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103722676 - NM_181893 UBE2D3 1 0.01 0.21 12 3.68 67.86 33 5.72 Yes 31 -2.49 No 0 0 No -30 0.44 No 40 51.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 103722729 - NM_181893 UBE2D3 1 0.02 0.28 16 -0.11 54.98 39 6.49 Yes 76 0.95 Yes 25 0.23 Yes -39 0.78 Yes 31 71.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 103723815 - NM_181893 UBE2D3 1 0.01 0.14 9 -2.87 0 22 5.91 Yes 9 0.74 No 26 0.71 Yes -28 0.84 Yes 42 92.61 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 103730317 - NM_181893 UBE2D3 1 0.38 5.68 69 7.66 73.91 33 5.82 Yes 28 0.41 No 27 0.59 Yes -27 0.73 Yes 43 75.05 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 103730879 - NM_181893 UBE2D3 1 0.01 0.11 8 -14.05 0 13 4.36 No 26 1.2 Yes 25 0.89 Yes -27 0.45 No 25 47.83 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 103730881 - NM_181893 UBE2D3 1 0.07 0.9 38 -3.68 0 11 4.12 No 24 1.2 Yes 26 0.56 Yes -25 0.48 No 34 56.99 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 43967612 + NM_015983 UBE2D4 1 6.4 1.1 45 8.85 91.29 22 5.83 Yes 52 -2.3 No 21 0.64 Yes -21 0.79 Yes 49 86.26 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 43985038 + NM_015983 UBE2D4 1 0.3 0.13 8 9.15 89.95 18 6.35 Yes 41 0.26 No 0 0 No -27 0.51 No 45 32.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 43985087 + NM_015983 UBE2D4 1 0.53 0.24 14 3.94 82.89 37 5.18 No 55 -1.41 No 0 0 No -29 0.92 Yes 41 77.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 43986757 + NM_015983 UBE2D4 1 5.09 2.08 56 3.01 0 36 6.22 Yes 56 1.01 Yes 34 0.15 Yes -34 0.76 Yes 36 77.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 43986778 + NM_015983 UBE2D4 1 0.25 0.1 7 6.21 90.92 28 5.29 No 70 0.18 No 0 0 No -27 0.69 Yes 15 62.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 23894110 + NM_001202476 UBE2E1 1 0.03 0.19 11 4.6 0 39 8.41 Yes 26 1.12 Yes 0 0 No -38 0.68 Yes 32 44.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 23905787 + NM_001202476 UBE2E1 1 0.06 0.32 19 7.32 75.39 53 8.34 Yes 54 1.01 Yes 0 0 No -52 0.87 Yes 18 97.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 23930738 + NM_001202476 UBE2E1 1 0.04 0.29 15 8.53 87.52 34 6.24 Yes 31 1.75 Yes 0 0 No -33 0.8 Yes 37 83.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 23931862 + NM_001202476 UBE2E1 1 0.01 0.15 10 -1.84 57.54 67 7.88 Yes 47 1.12 Yes 0 0 No -35 0.48 No 35 61.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 23263177 + NM_152653 UBE2E2 1 0.1 0.13 7 3.97 61.08 33 5.74 Yes 20 0.61 No 0 0 No -32 0.8 Yes 17 55.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 23267262 + NM_152653 UBE2E2 1 0.61 0.78 33 6.96 79.83 36 7.14 Yes 23 1.93 Yes 0 0 No -35 0.81 Yes 35 92.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 23301109 + NM_152653 UBE2E2 1 0.19 0.22 12 -8.1 80.04 28 6.08 Yes 1 0.69 No 0 0 No -27 0.64 No 43 71.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 23301119 + NM_152653 UBE2E2 1 0.1 0.14 7 -0.64 0 9 4.36 No 11 0.65 No 0 0 No -37 0.68 Yes 33 73.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 23312440 + NM_152653 UBE2E2 1 2.82 3.5 66 6.84 88.01 32 5.48 No 19 1.21 Yes 24 0.77 Yes -24 0.53 No 46 52.12 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 23316037 + NM_152653 UBE2E2 1 0.22 0.24 17 8.06 86.16 26 7.55 Yes 13 1.41 Yes 0 0 No -25 0.94 Yes 45 94.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 23373659 + NM_152653 UBE2E2 1 3.3 3.68 60 4.76 83.86 30 6.57 Yes 32 1.01 Yes 0 0 No -29 0.85 Yes 41 89.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 23386010 + NM_152653 UBE2E2 1 0.4 0.49 25 7.74 87.65 31 5.44 No 59 1.63 Yes 0 0 No -30 0.47 No 40 55.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 23387356 + NM_152653 UBE2E2 1 1.27 1.65 49 9.19 77.66 64 7.13 Yes 25 0.59 No 0 0 No -24 0.61 No 26 49.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 23458792 + NM_152653 UBE2E2 1 0.62 0.75 36 9.85 93.97 40 6.7 Yes 27 1.69 Yes 0 0 No -39 0.63 No 36 79.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 23460939 + NM_152653 UBE2E2 1 1.21 1.51 48 6.68 89.25 27 3.79 No 61 0.96 Yes 0 0 No -26 0.59 No 47 67.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 23491348 + NM_152653 UBE2E2 1 1.12 1.51 52 9.01 91.51 31 6.77 Yes 18 1.05 Yes 0 0 No -30 0.85 Yes 40 95.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 23497726 + NM_152653 UBE2E2 1 0.45 0.53 21 7.1 84 37 6.16 Yes 24 0.87 Yes 0 0 No -31 0.39 No 34 54.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 23575643 + NM_152653 UBE2E2 1 1.67 2.33 63 6.4 88.76 32 5.92 Yes 27 0.66 No 0 0 No -32 0.82 Yes 38 83.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 181852064 + NM_001278554 UBE2E3 1 0.49 0.72 38 7.8 85.86 29 4.17 No 27 0.97 Yes 32 0.71 Yes -28 0.82 Yes 42 86.52 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 181854608 + NM_001278554 UBE2E3 1 0.14 0.22 12 8.77 97.68 29 5.47 No 57 0.75 No 28 0.73 Yes -29 0.44 No 45 51.86 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 181864344 + NM_001278554 UBE2E3 1 0.16 0.22 13 9.73 92.63 25 8.06 Yes 12 0.31 No 0 0 No -24 0.88 Yes 46 91.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 181908597 + NM_001278554 UBE2E3 1 0.31 0.44 25 6.71 88.12 32 5.86 Yes 67 1.1 Yes 0 0 No -31 0.73 Yes 39 57.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 238900532 + NM_001278306 UBE2F 1 0.1 0.14 9 3.01 0 26 6.28 Yes 13 0.71 No 0 0 No -25 0.38 No 45 49.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 238912009 + NM_001278306 UBE2F 1 0.14 0.17 9 5.46 76.62 27 6.7 Yes 14 1.87 Yes 0 0 No -26 0.88 Yes 44 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 238914740 + NM_001278306 UBE2F 1 0.27 0.31 14 7.72 91.4 23 5.9 Yes 66 -5.86 No 0 0 No -22 0.93 Yes 48 94.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 238921624 + NM_001278306 UBE2F 1 0.17 0.18 12 10.65 92.55 24 6.5 Yes 11 0.36 No 0 0 No -26 0.87 Yes 44 69.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 238926389 + NM_001278306 UBE2F 1 0.1 0.14 8 3.7 79.3 24 6.36 Yes 7 2.08 Yes 0 0 No -23 0.64 No 37 70.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 238935581 + NM_001278306 UBE2F 1 0.09 0.13 7 9.15 91.68 25 5.43 No 12 0.47 No 0 0 No -24 0.45 No 42 66.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 238939197 + NM_001278306 UBE2F 1 0.07 0.1 7 -9.2 0 27 7.64 Yes 14 2.39 Yes 0 0 No -26 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 238939882 + NM_001278306 UBE2F 1 0.2 0.21 12 9.6 94.34 19 5 No 43 0.4 No 0 0 No -18 0.63 No 52 85.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 238942316 + NM_001278306 UBE2F 1 0.17 0.25 15 10.27 89.28 37 5.36 No 19 1.24 Yes 0 0 No -36 0.48 No 34 73.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 238982423 + NR_037904 UBE2F-SCLY 1 10.21 5.83 71 8 84.24 40 6.21 Yes 27 1.12 Yes 28 0.51 Yes -28 0.8 Yes 42 61.46 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 238990636 + NR_037904 UBE2F-SCLY 1 0.22 0.21 10 6.81 87.74 26 9.05 Yes 13 1.7 Yes 0 0 No -25 0.96 Yes 45 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 238991363 + NR_037904 UBE2F-SCLY 1 0.3 0.26 17 7.01 85.19 26 5.16 No 13 0.13 No 25 0.87 Yes -25 0.88 Yes 45 79.67 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 238991633 + NR_037904 UBE2F-SCLY 1 1.57 1.31 47 3.24 73.76 41 6.36 Yes 74 0.25 No 25 0.75 Yes -25 0.36 No 35 51 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 238992534 + NR_037904 UBE2F-SCLY 1 0.2 0.17 10 5.44 67.97 43 7 Yes 10 1.02 Yes 0 0 No -42 0.69 Yes 48 66.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 238993816 + NR_037904 UBE2F-SCLY 1 0.25 0.24 14 4.58 77.23 16 6.44 Yes 3 0.96 Yes 0 0 No -25 0.59 No 45 38.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 239004135 + NR_037904 UBE2F-SCLY 1 0.68 0.21 13 6.23 74.19 37 6.4 Yes 51 0.47 No 36 0.4 Yes -36 0.35 No 35 48.18 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 4173432 - NM_003342 UBE2G1 1 0.03 0.14 10 10.82 91.46 28 5.18 No 69 0.76 No 0 0 No -27 0.74 Yes 43 83.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4186213 - NM_003342 UBE2G1 1 0.02 0.14 7 -3.84 0 27 5.1 No 14 0.37 No 0 0 No -31 0.5 No 39 54.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 4192663 - NM_003342 UBE2G1 1 0.07 0.24 14 -6.86 74.61 27 5.94 Yes 14 0.97 Yes 0 0 No -26 0.82 Yes 44 84.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4194651 - NM_003342 UBE2G1 1 0.08 0.33 18 4.74 84.41 32 6.62 Yes 19 1.24 Yes 0 0 No -31 0.77 Yes 39 79.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4200105 - NM_003342 UBE2G1 1 3.33 10.81 72 4.53 0 40 6.24 Yes 55 1.09 Yes 0 0 No -39 0.78 Yes 31 80.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4200135 - NM_003342 UBE2G1 1 0.04 0.13 8 -11.81 0 23 4.14 No 25 1.05 Yes 28 0.36 Yes -23 0.34 No 61 36.27 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 4201599 - NM_003342 UBE2G1 1 0.07 0.22 15 10.25 97.81 39 10.76 Yes 26 1.29 Yes 0 0 No -38 0.86 Yes 32 89.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4207041 - NM_003342 UBE2G1 1 0.06 0.19 13 8.22 86.98 31 6.27 Yes 6 0.78 Yes 0 0 No -30 0.79 Yes 40 86.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4225527 - NM_003342 UBE2G1 1 0.17 0.33 17 2.87 80.97 28 8.38 Yes 15 0.96 Yes 0 0 No -27 0.92 Yes 43 96.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4235184 - NM_003342 UBE2G1 1 0.38 0.69 34 7.15 83.93 18 5.61 Yes 5 1.3 Yes 32 0.43 Yes -32 0.47 No 38 70.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 4238620 - NM_003342 UBE2G1 1 0.04 0.1 7 13.36 90.1 22 5.83 Yes 9 2.18 Yes 21 0.88 Yes -21 0.91 Yes 49 87.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 4265248 - NM_003342 UBE2G1 1 0.08 0.15 10 3.06 0 41 7.87 Yes 28 1.28 Yes 0 0 No -40 0.9 Yes 30 92.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 46193558 - NM_182688 UBE2G2 1 0.23 0.4 19 3.78 79.8 37 6 Yes 24 1.36 Yes 0 0 No -36 0.68 Yes 34 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 46194657 - NM_182688 UBE2G2 1 0.08 0.13 8 4.76 67.56 23 6.4 Yes 10 0.98 Yes 22 0.8 Yes -22 0.78 Yes 48 83.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 46194736 - NM_182688 UBE2G2 1 0.41 0.67 28 3.85 79.11 19 6 Yes 6 0.93 Yes 29 0.24 Yes -29 0.37 No 37 31.03 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr21 46196061 - NM_182688 UBE2G2 1 0.28 0.47 24 8.51 82.24 43 6.17 Yes 46 1.2 Yes 0 0 No -27 0.57 No 41 60.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 46199132 - NM_182688 UBE2G2 1 0.4 0.64 34 10.87 81.86 34 6.48 Yes 2 1.89 Yes 33 0.5 Yes -33 0.68 Yes 37 73.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 1362397 + NM_194259 UBE2I 1 13.73 1.96 53 4.29 83.49 25 4.99 No 76 1.42 Yes 0 0 No -24 0.55 No 46 38.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 1364757 + NM_194259 UBE2I 1 0.08 0.61 26 12.62 93.86 15 5.54 No 64 1.56 Yes 0 0 No -28 0.85 Yes 42 63.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 1365431 + NM_194259 UBE2I 1 0.02 0.14 9 12.55 92.48 28 6.48 Yes NA NA NA 0 0 No -27 0.68 Yes 43 80.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 1369702 + NM_194259 UBE2I 1 0.13 0.93 38 4.86 81.52 33 8.54 Yes 20 1.09 Yes 32 0.84 Yes -32 0.72 Yes 38 89.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 1374739 + NM_194259 UBE2I 1 0.02 0.15 7 -3.04 0 12 4.24 No 26 2.12 Yes 0 0 No -38 0.95 Yes 32 97.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 90039622 - NM_016021 UBE2J1 1 0.02 0.25 14 5.27 69.08 36 6.22 Yes 23 0.63 No 0 0 No -35 0.68 Yes 38 56.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 90039665 - NM_016021 UBE2J1 1 0.01 0.13 8 -1.35 0 15 4.58 No 12 -1.99 No 0 0 No -38 0.5 No 33 41.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 90039707 - NM_016021 UBE2J1 1 2.43 29.25 72 6.47 86.3 31 5.75 Yes 42 0.7 No 26 0.66 Yes -30 0.55 No 52 53.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 90039707 - NM_016021 UBE2J1 1 0.07 0.79 34 6.47 86.3 31 5.75 Yes 42 0.7 No 26 0.66 Yes -30 0.55 No 52 53.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 90042826 - NM_016021 UBE2J1 1 0.01 0.15 10 2.99 79.98 33 5.3 No 53 0.53 No 0 0 No -26 0.49 No 42 70.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 90042921 - NM_016021 UBE2J1 1 0.02 0.18 10 0.73 0 35 8.66 Yes 66 -1.57 No 0 0 No -34 0.88 Yes 36 93.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 90044519 - NM_016021 UBE2J1 1 0.15 1.76 53 1.9 0 21 4.58 No 69 -4.39 No 0 0 No -24 0.61 No 46 77.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 90044531 - NM_016021 UBE2J1 1 0.02 0.19 11 4.44 67.7 32 6.13 Yes 71 -5.68 No 0 0 No -35 0.62 No 35 77.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 90045150 - NM_016021 UBE2J1 1 0.07 0.61 30 -14.9 0 39 7 Yes 26 0.75 No 0 0 No -25 0.72 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 90048026 - NM_016021 UBE2J1 1 0.03 0.44 22 -2.05 0 26 6.03 Yes 67 1.35 Yes 0 0 No -25 0.76 Yes 45 62.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 1190801 - NM_194458 UBE2J2 1 0.29 0.6 33 5.19 84.75 19 5 No 57 -3.66 No 0 0 No -25 0.71 Yes 45 52.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 1190865 - NM_194458 UBE2J2 1 0.16 0.35 22 -5.47 81.16 33 6.24 Yes 61 -1.82 No 0 0 No -32 0.62 No 38 70.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 1191501 - NM_194458 UBE2J2 1 0.21 0.42 21 -0.82 0 28 6.84 Yes 15 1.57 Yes 0 0 No -27 0.8 Yes 43 74.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 1191562 - NM_194458 UBE2J2 1 0.22 0.39 22 7.08 82.16 24 6.06 Yes 11 0.74 No 0 0 No -23 0.9 Yes 47 91.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 1197771 - NM_194458 UBE2J2 1 2.25 4.21 71 5.98 87.88 36 6.16 Yes 23 0.02 No 25 0.63 Yes -35 0.6 No 35 71.64 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr4 39739602 + NM_001312647 UBE2K 1 0.02 0.13 7 10.05 98.6 16 4.19 No 35 1.37 Yes 0 0 No -28 0.49 No 42 78.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 39744911 + NM_001312647 UBE2K 1 0.03 0.14 9 8.1 96.96 15 4.29 No 68 0.9 Yes 0 0 No -27 0.39 No 51 49.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39752963 + NM_001312647 UBE2K 1 0.13 0.6 32 9.34 85.35 40 6.48 Yes 27 0.32 No 0 0 No -34 0.64 No 36 84.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 39763497 + NM_001312647 UBE2K 1 0.02 0.11 7 7.66 82.63 18 5.57 Yes 5 0.46 No 0 0 No -24 0.81 Yes 46 87.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 39767824 + NM_001312647 UBE2K 1 0.22 1.25 45 -2.01 88.13 63 8.54 Yes 50 2.33 Yes 0 0 No -35 0.24 No 40 44.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39767848 + NM_001312647 UBE2K 1 0.28 1.46 51 8.47 79.23 27 5.74 Yes 74 2.32 Yes 0 0 No -26 0.69 Yes 44 63.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 39768969 + NM_001312647 UBE2K 1 0.06 0.39 23 3.24 83.04 71 8.35 Yes 70 1.81 Yes 0 0 No -70 0.11 No 44 17.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 39769126 + NM_001312647 UBE2K 1 0.08 0.47 24 6.52 85.22 18 7 Yes 72 1.24 Yes 0 0 No -17 0.59 No 53 73.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 39769129 + NM_001312647 UBE2K 1 0.07 0.36 21 3.74 79.93 21 7.21 Yes 75 1.23 Yes 0 0 No -20 0.83 Yes 50 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39777007 + NM_001312647 UBE2K 1 0.02 0.1 7 9.7 81.81 25 4.95 No 37 1.1 Yes 0 0 No -21 0.39 No 49 68.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 21957038 + NR_046082 UBE2L3 1 0.05 0.51 31 7.66 83.29 22 5.29 No 9 0.57 No 0 0 No -21 0.82 Yes 49 72.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 21968845 + NR_046082 UBE2L3 1 0.52 4.11 69 10.5 74.87 31 5.85 Yes 18 1.29 Yes 0 0 No -30 0.97 Yes 40 98.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 21972578 + NR_046082 UBE2L3 1 0.07 0.53 29 8.28 97.81 18 5.33 No 5 0.21 No 0 0 No -32 0.44 No 44 59.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 57324959 - NM_004223 UBE2L6 1 0.4 2.04 53 -0.87 72.38 26 5 No 62 -5.16 No 0 0 No -25 0.85 Yes 45 24.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 57325122 - NM_004223 UBE2L6 1 0.04 0.19 9 -4.39 76.07 28 7.12 Yes 15 0.98 Yes 0 0 No -27 0.96 Yes 43 97.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 59067695 - NM_003969 UBE2M 1 0.05 0.19 13 3.09 84.52 31 5.25 No 63 1.98 Yes 0 0 No -30 0.87 Yes 40 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 59067745 - NM_003969 UBE2M 1 0.05 0.25 14 -11.28 73.2 26 5.32 No 13 1.99 Yes 0 0 No -25 0.82 Yes 45 82.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 59067858 - NM_003969 UBE2M 1 0.34 1.65 54 4.13 79.73 49 8.63 Yes 36 2.73 Yes 0 0 No -48 0.84 Yes 22 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 59068162 - NM_003969 UBE2M 1 0.67 3.54 68 -1.59 80.22 28 4.77 No 33 0.34 No 27 0.56 Yes -23 0.54 No 43 69.33 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 59068164 - NM_003969 UBE2M 1 0.13 0.67 38 2.7 0 26 4.66 No 31 0.34 No 27 0.56 Yes -25 0.53 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 59068195 - NM_003969 UBE2M 1 0.09 0.46 28 -2.43 0 13 4.36 No 55 -5.59 No 27 0.56 Yes -17 0.54 No 53 64.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 93803852 - NM_003348 UBE2N 1 0.04 0.4 24 2.35 0 33 4.65 No 17 0.75 No 0 0 No -29 0.53 No 41 46.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 93804636 - NM_003348 UBE2N 1 0.02 0.25 17 -3.46 0 20 3.22 No 37 0.61 No 0 0 No -19 0.74 Yes 21 53.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 74388064 - NM_022066 UBE2O 1 0.5 0.36 18 6.58 81.74 26 6.74 Yes 52 0.89 Yes 0 0 No -21 0.45 No 31 62.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 74393973 - NM_022066 UBE2O 1 10.52 7.21 70 5.37 81.15 21 6.4 Yes 8 2.09 Yes 20 0.88 Yes -20 0.86 Yes 50 89.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 74394661 - NM_022066 UBE2O 1 0.16 0.15 10 2.59 0 30 6.3 Yes 17 0.76 No 0 0 No -33 0.66 No 37 71.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 74396626 - NM_022066 UBE2O 1 0.24 0.15 10 0.91 0 15 3.83 No 22 1.82 Yes 0 0 No -34 0.94 Yes 36 87.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 74409071 - NM_022066 UBE2O 1 0.34 0.11 7 6.78 82.23 27 5.2 No 55 0.89 Yes 0 0 No -26 0.72 Yes 22 67.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 74414053 - NM_022066 UBE2O 1 0.22 0.11 7 5.51 77.15 35 5.53 No 70 1.85 Yes 0 0 No -34 0.82 Yes 36 94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154522883 - NM_017582 UBE2Q1 1 0.16 0.49 26 12.02 88.71 33 5.65 Yes 71 2.25 Yes 0 0 No -32 0.79 Yes 38 89.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154523234 - NM_017582 UBE2Q1 1 0.17 0.53 29 6.47 79.58 21 6.66 Yes 54 1.23 Yes 0 0 No -20 0.86 Yes 50 94.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154523958 - NM_017582 UBE2Q1 1 0.04 0.11 7 -5.61 0 18 4.47 No 76 -1.52 No 0 0 No -42 0.73 Yes 28 84.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154524324 - NM_017582 UBE2Q1 1 0.05 0.14 9 -4.65 0 19 4.12 No 58 -0.92 No 19 0.84 Yes -18 0.59 No 52 42.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 154524424 - NM_017582 UBE2Q1 1 0.39 1.24 47 4.5 80.78 29 6.39 Yes 43 1.74 Yes 0 0 No -28 0.5 No 42 51.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 154524549 - NM_017582 UBE2Q1 1 0.03 0.1 7 6.15 92.15 18 3.55 No 22 0.8 Yes 0 0 No -23 0.71 Yes 47 82.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154524778 - NM_017582 UBE2Q1 1 0.03 0.13 8 5.08 89.87 20 4.65 No 56 -3.69 No 0 0 No -19 0.51 No 51 65.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 154528000 - NM_017582 UBE2Q1 1 0.03 0.14 8 0.96 0 18 4.24 No 23 0.84 Yes 0 0 No -35 0.86 Yes 35 80.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154528056 - NM_017582 UBE2Q1 1 0.04 0.14 10 4.56 76.81 26 5.06 No 6 0.49 No 0 0 No -25 0.81 Yes 45 84.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 76161264 + NM_001145335 UBE2Q2 1 0.09 0.11 7 6.5 83.41 27 5.74 Yes 22 0.6 No 20 0.14 Yes -26 0.92 Yes 44 94.43 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 76161273 + NM_001145335 UBE2Q2 1 0.09 0.11 8 0.62 0 18 4.24 No 31 0.59 No 20 0.14 Yes -35 0.94 Yes 35 93.77 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 76167165 + NM_001145335 UBE2Q2 1 0.61 0.83 33 5.95 74.69 23 5.99 Yes 17 1.27 Yes 0 0 No -22 0.71 Yes 48 81.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 76173730 + NM_001145335 UBE2Q2 1 0.33 0.29 16 10.33 88.48 21 5.83 Yes 26 0.7 No 0 0 No -20 0.47 No 37 51.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 76179597 + NM_001145335 UBE2Q2 1 0.11 0.1 7 3.79 79.45 22 7.34 Yes 35 0.64 No 0 0 No -21 0.87 Yes 49 92.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33852627 + NM_017811 UBE2R2 1 0.06 0.11 8 10.05 91.71 29 5.57 Yes 16 0.59 No 0 0 No -28 0.89 Yes 42 88.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33887315 + NM_017811 UBE2R2 1 0.04 0.11 8 7.25 83.33 45 6.3 Yes -3 0.97 Yes 0 0 No -29 0.43 No 41 63.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 33896461 + NM_017811 UBE2R2 1 0.07 0.18 10 10.72 88.27 38 4.78 No 47 0.85 Yes 0 0 No -32 0.76 Yes 38 81.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 33899226 + NM_017811 UBE2R2 1 0.17 0.43 21 9.98 85.05 31 6.3 Yes 18 0.33 No 0 0 No -26 0.74 Yes 44 71.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 33912017 + NM_017811 UBE2R2 1 0.04 0.14 8 4.77 81.53 25 5.08 No 65 1.53 Yes 0 0 No -25 0.68 Yes 45 79.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 55915516 - NM_014501 UBE2S 1 0.9 5.17 66 1.35 67.27 32 5.53 No 67 0.91 Yes 31 0.52 Yes -22 0.47 No 48 70.37 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 55915770 - NM_014501 UBE2S 1 0.04 0.26 17 6.88 73.7 34 4.4 No 30 -0.75 No 23 0.41 Yes -19 0.49 No 41 40.33 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 55917697 - NM_014501 UBE2S 1 0.02 0.15 10 4.63 89.34 24 5.1 No 46 -2.65 No 0 0 No -23 0.63 No 47 81.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 55918803 - NM_014501 UBE2S 1 0.05 0.18 9 5.79 82.33 16 4.69 No 19 1.1 Yes 0 0 No -31 0.67 Yes 39 64.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 202304178 - NM_014176 UBE2T 1 0.24 0.46 23 -1.71 0 12 3.93 No 34 1.77 Yes 0 0 No -35 0.63 No 35 79.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 48715502 - NM_001282580 UBE2V1 1 0.11 0.32 21 6.73 91.79 20 5.09 No 25 0.96 Yes 26 0.26 Yes -26 0.48 No 44 77.89 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 48715519 - NM_001282580 UBE2V1 1 0.42 1.28 55 6.75 82.33 55 6.09 Yes 42 0.88 Yes 26 0.26 Yes -21 0.68 Yes 49 55.55 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 48721029 - NM_001282580 UBE2V1 1 0.06 0.19 12 5.2 85.02 18 6.71 Yes 5 1.23 Yes 0 0 No -17 0.6 No 53 84.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 48728100 - NM_001282580 UBE2V1 1 0.1 0.28 18 7.95 83.2 28 5.87 Yes 15 0.54 No 26 0.39 Yes -30 0.38 No 40 76.75 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 48947425 + NM_003350 UBE2V2 1 0.65 0.83 38 6.57 74.52 32 6.5 Yes 49 0.87 Yes 31 0.77 Yes -31 0.92 Yes 39 85.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 48954398 + NM_003350 UBE2V2 1 0.31 0.35 20 7.03 90.92 52 8.19 Yes 39 0.98 Yes 0 0 No -26 0.59 No 44 44.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 48956058 + NM_003350 UBE2V2 1 0.39 1.19 48 4.64 83.54 19 5 No 76 -5.85 No 23 0.61 Yes -18 0.35 No 52 60.49 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 48960689 + NM_003350 UBE2V2 1 0.05 0.15 10 5.11 88.13 28 5.29 No 15 0.21 No 0 0 No -27 0.83 Yes 43 45.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 48962819 + NM_003350 UBE2V2 1 0.45 1.44 52 8.14 88.56 37 7.77 Yes 24 0.95 Yes 36 0.65 Yes -36 0.47 No 34 59.94 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 74717960 - NM_001271015 UBE2W 1 0.21 0.18 10 -1.16 82.5 21 6.15 Yes 42 1.36 Yes 0 0 No -30 0.73 Yes 40 65.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 74722786 - NM_001271015 UBE2W 1 1.01 0.65 31 7.88 80.45 25 5.47 No 30 1.14 Yes 0 0 No -24 0.78 Yes 46 52.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 74782537 - NM_001271015 UBE2W 1 7.17 2.57 65 9.99 92.56 28 4.36 No 76 1.12 Yes 27 0.78 Yes -25 0.81 Yes 45 96.33 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 46997024 + NM_023079 UBE2Z 1 0.41 1.35 49 6.28 86.16 20 5.57 Yes 62 1.74 Yes 0 0 No -19 0.59 No 51 84.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 47003882 + NM_023079 UBE2Z 1 0.06 0.21 11 5.4 90.92 28 5.02 No 42 0.94 Yes 0 0 No -27 0.57 No 43 33.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 25598723 - NM_130839 UBE3A 1 0.16 0.28 19 8.29 92.6 22 5.91 Yes 9 0.52 No 0 0 No -25 0.43 No 42 68.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 25601129 - NM_130839 UBE3A 1 0.12 0.22 16 5.84 84.95 21 5.2 No 0 0.52 No 0 0 No -20 0.76 Yes 52 73.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 25601890 - NM_130839 UBE3A 1 0.22 0.47 26 9.12 86.1 41 8.54 Yes 28 0.47 No 0 0 No -22 0.61 No 42 59.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 25605323 - NM_130839 UBE3A 1 0.09 0.21 14 5.71 84.52 28 7.39 Yes 15 1.26 Yes 0 0 No -27 0.72 Yes 43 62.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 25605671 - NM_130839 UBE3A 1 0.21 0.33 18 -0.71 0 51 7.08 Yes 73 1.99 Yes 0 0 No -38 0.68 Yes 25 71.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 25618923 - NM_130839 UBE3A 1 0.12 0.22 14 3.07 78.8 19 5.33 No 39 1.14 Yes 0 0 No -24 0.67 Yes 46 80.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 25639006 - NM_130839 UBE3A 1 0.77 1.61 57 9.45 90.57 25 5.57 Yes 12 1.3 Yes 0 0 No -24 0.91 Yes 46 93.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 25652285 - NM_130839 UBE3A 1 1.47 1.6 53 5.69 74.63 16 5.22 No 67 -3.82 No 23 0.81 Yes -23 0.82 Yes 47 94.62 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 25652360 - NM_130839 UBE3A 1 0.21 0.25 18 8.01 84.04 23 4.32 No 58 1.65 Yes 0 0 No -23 0.52 No 52 46.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 25652376 - NM_130839 UBE3A 1 0.12 0.15 9 1.62 0 22 5.83 Yes 42 1.65 Yes 0 0 No -30 0.75 Yes 40 72.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 25652380 - NM_130839 UBE3A 1 0.18 0.18 11 2.71 81.02 18 5.48 No 38 1.65 Yes 0 0 No -26 0.82 Yes 44 75.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 25652410 - NM_130839 UBE3A 1 4 4.47 70 10.76 84.49 21 7.63 Yes 8 1.69 Yes 20 0.78 Yes -20 0.72 Yes 50 80.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 25653832 - NM_130839 UBE3A 1 36.14 40.46 72 6.68 83.73 26 5.2 No 46 0.9 Yes 25 0.59 Yes -24 0.3 No 42 32.07 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 25655853 - NM_130839 UBE3A 1 0.11 0.14 9 6.39 93.54 36 7.75 Yes 33 0.32 No 0 0 No -35 0.65 No 35 47.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 25660990 - NM_130839 UBE3A 1 3.3 1.83 59 10.22 88.27 33 7.35 Yes 20 1.93 Yes 0 0 No -32 0.91 Yes 38 93.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 25665900 - NM_130839 UBE3A 1 2.17 1.14 43 6.67 85.96 23 7.14 Yes 10 0.81 Yes 0 0 No -22 0.8 Yes 48 83.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 25667109 - NM_130839 UBE3A 1 1.77 0.99 43 10.02 90.31 56 6.32 Yes 11 0.37 No 0 0 No -23 0.59 No 47 65.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 25671367 - NM_130839 UBE3A 1 0.27 0.14 9 3.86 76.47 27 4.22 No 58 0.84 Yes 0 0 No -26 0.45 No 44 62.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 109923384 + NM_183415 UBE3B 1 0.19 0.1 7 10.09 96.05 25 6.15 Yes 65 -2.65 No 0 0 No -31 0.8 Yes 39 84.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 109928294 + NM_183415 UBE3B 1 7.16 4.64 70 10.87 78.37 24 4.47 No 11 1.63 Yes 23 0.9 Yes -23 0.64 No 47 69.07 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 109929482 + NM_183415 UBE3B 1 0.28 0.17 9 7.12 79.95 22 6.6 Yes 61 0.62 No 0 0 No -21 0.42 No 49 37.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 109946335 + NM_183415 UBE3B 1 2.3 0.86 37 7.82 82.17 50 7.77 Yes 37 0.4 No 0 0 No -49 0.5 No 21 77.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 109953219 + NM_183415 UBE3B 1 0.35 0.19 12 5.41 90.92 28 4.25 No 3 0.8 Yes 0 0 No -27 0.49 No 43 43.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 109963417 + NM_183415 UBE3B 1 0.48 0.24 12 9.9 87.31 21 7.26 Yes 8 0.41 No 0 0 No -25 0.82 Yes 45 78.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 109971749 + NM_183415 UBE3B 1 9.46 2.92 69 1.29 81.68 20 5.28 No 64 -3.15 No 29 0.48 Yes -26 0.58 No 51 48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 109971752 + NM_183415 UBE3B 1 5.3 1.56 50 4.67 87.2 23 5.51 No 67 -3.15 No 29 0.48 Yes -22 0.53 No 48 50.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 109972375 + NM_183415 UBE3B 1 0.41 0.11 8 4 78.97 24 5 No 25 -1.27 No 23 0.84 Yes -19 0.57 No 51 53.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 109973042 + NM_183415 UBE3B 1 0.48 0.15 10 6.6 84.85 38 6.53 Yes 3 0.83 Yes 0 0 No -37 0.54 No 33 74.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 156932449 + NM_014671 UBE3C 1 1.19 1.17 42 9.68 92.15 26 6.13 Yes 18 0.58 No 0 0 No -25 0.88 Yes 45 84.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 156959109 + NM_014671 UBE3C 1 0.24 0.26 17 10.2 93.61 45 4.8 No 7 1.91 Yes 0 0 No -40 0.3 No 42 42.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 156961745 + NM_014671 UBE3C 1 0.61 0.74 32 -3.68 0 41 7.77 Yes 28 2.11 Yes 0 0 No -40 0.37 No 30 81.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 156965490 + NM_014671 UBE3C 1 0.06 0.11 7 7.39 80.74 20 6.48 Yes 7 1.11 Yes 0 0 No -19 0.88 Yes 51 92.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 156967614 + NM_014671 UBE3C 1 0.09 0.15 9 -9.1 0 35 5.45 No 33 0.3 No 0 0 No -34 0.54 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 156967663 + NM_014671 UBE3C 1 0.08 0.11 7 4.59 79.79 27 5.27 No 14 0.08 No 0 0 No -26 0.66 No 44 69.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 156971684 + NM_014671 UBE3C 1 0.07 0.13 9 11.59 87.95 25 5.57 Yes 56 0.7 No 0 0 No -24 0.56 No 48 65.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 156974781 + NM_014671 UBE3C 1 0.06 0.1 7 2.46 65.33 19 5.57 Yes 1 0.06 No 26 0.74 Yes -26 0.56 No 44 67.75 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 156981642 + NM_014671 UBE3C 1 0.21 0.35 17 3.3 75.33 26 6.73 Yes 63 1.19 Yes 25 0.67 Yes -26 0.57 No 40 47.74 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 156996448 + NM_014671 UBE3C 1 0.1 0.21 12 7.01 77.84 30 5.97 Yes 71 0.76 No 0 0 No -29 0.66 Yes 41 73.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 156998121 + NM_014671 UBE3C 1 0.17 0.36 22 3.67 84.43 32 8.27 Yes 2 0.75 No 0 0 No -31 0.87 Yes 39 84.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 157000402 + NM_014671 UBE3C 1 0.31 0.58 29 3.97 0 9 3.87 No 67 0.26 No 0 0 No -20 0.32 No 50 51.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 157004514 + NM_014671 UBE3C 1 0.41 0.85 34 3.59 76.55 26 5.08 No 53 1.21 Yes 0 0 No -25 0.74 Yes 45 74.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 157009069 + NM_014671 UBE3C 1 0.05 0.13 8 11.81 85.99 35 6.4 Yes -3 0.42 No 0 0 No -32 0.46 No 38 57.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 157018083 + NM_014671 UBE3C 1 0.22 0.38 22 7.04 78.21 31 5.92 Yes -3 0.77 Yes 21 0.92 Yes -30 0.55 No 39 66.24 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 157025097 + NM_014671 UBE3C 1 0.57 0.81 37 5.76 84.95 32 5.66 Yes 70 -1.95 No 0 0 No -31 0.54 No 39 51.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 157046360 + NM_014671 UBE3C 1 0.13 0.21 11 5.23 79.66 21 5.22 No 38 1.42 Yes 0 0 No -38 0.71 Yes 32 84.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 157047111 + NM_014671 UBE3C 1 0.38 0.33 18 9.71 95.65 25 6.88 Yes 12 0.78 Yes 0 0 No -28 0.47 No 46 52.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 157049021 + NM_014671 UBE3C 1 0.19 0.21 13 0.99 71.73 31 5.52 No 74 0 No 0 0 No -28 0.64 No 42 64.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 157049610 + NM_014671 UBE3C 1 0.14 0.17 10 -5.98 78.48 28 4.85 No 42 0.26 No 0 0 No -30 0.7 Yes 40 68.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 157050179 + NM_014671 UBE3C 1 0.2 0.33 20 3.97 76.32 28 5.71 Yes 49 1.32 Yes 0 0 No -22 0.68 Yes 48 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 83603801 - NM_198920 UBE3D 1 1.43 0.28 14 8.23 81.8 14 6.43 Yes 56 0.92 Yes 0 0 No -30 0.66 No 43 64.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 83605023 - NM_198920 UBE3D 1 1.53 0.21 11 3.15 0 33 6.11 Yes 20 1.67 Yes 0 0 No -32 0.5 No 38 70.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 83622662 - NM_198920 UBE3D 1 1.46 0.19 12 10.6 93.05 31 4.71 No -1 1.01 Yes 0 0 No -30 0.75 Yes 40 68.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 83654597 - NM_198920 UBE3D 1 7.53 0.81 40 12.84 88.58 40 5.08 No 24 0.58 No 0 0 No -26 0.45 No 35 71.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 83665591 - NM_198920 UBE3D 1 1.06 0.14 10 8.77 88.39 24 5.11 No -3 0.62 No 0 0 No -24 0.75 Yes 46 72.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 83691278 - NM_198920 UBE3D 1 0.47 0.13 8 11.1 92.63 23 4.26 No 4 0.06 No 0 0 No -25 0.39 No 45 45.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 83735599 - NM_198920 UBE3D 1 3.37 0.65 35 10.11 85.05 34 9.12 Yes 62 0.09 No 0 0 No -40 0.31 No 32 59.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 83742026 - NM_198920 UBE3D 1 3.26 0.61 32 9.63 87.65 44 4.94 No 8 1.03 Yes 0 0 No -30 0.66 Yes 40 68.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 83759492 - NM_198920 UBE3D 1 7.54 1.22 49 8.28 90.36 19 4.84 No 6 0.56 No 18 0.71 Yes -24 0.56 No 52 52.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 83770526 - NM_198920 UBE3D 1 0.86 0.13 9 6.4 79.27 63 6.53 Yes 46 0.87 Yes 0 0 No -32 0.79 Yes 38 79.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 83772965 - NM_198920 UBE3D 1 4 0.51 31 8.51 86.62 21 5.66 Yes 8 1.11 Yes 20 0.7 Yes -20 0.77 Yes 50 88.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 118232356 + NM_004788 UBE4A 1 0.18 0.21 12 10.92 94.25 23 5.39 No 74 -4.04 No 0 0 No -20 0.56 No 50 58.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 118234862 + NM_004788 UBE4A 1 1.35 1.44 52 5.6 79.18 32 6.94 Yes 60 1.1 Yes 0 0 No -32 0.61 No 38 59.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 118235392 + NM_004788 UBE4A 1 2.44 2.78 68 10.53 91.48 24 6.95 Yes 11 1.01 Yes 0 0 No -23 0.5 No 47 59.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 118235767 + NM_004788 UBE4A 1 0.11 0.13 7 8.32 79.81 19 4.69 No 20 1.52 Yes 0 0 No -32 0.44 No 38 54.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 118239328 + NM_004788 UBE4A 1 0.06 0.14 8 2.09 70.42 22 4.81 No 68 0.71 No 21 0.87 Yes -22 0.76 Yes 48 65.44 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 118250209 + NM_004788 UBE4A 1 0.1 0.14 10 5.17 82.11 31 5.82 Yes 67 2.53 Yes 0 0 No -30 0.5 No 40 36.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 118260441 + NM_004788 UBE4A 1 0.1 0.17 12 -3.32 78.65 26 5.48 No 28 0.14 No 0 0 No -25 0.89 Yes 45 87.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 118263437 + NM_004788 UBE4A 1 0.13 0.22 13 5.53 79.79 37 6.03 Yes 76 1.69 Yes 23 0.82 Yes -25 0.74 Yes 45 81.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 10096576 + NM_001105562 UBE4B 1 0.27 0.29 16 8.22 88.27 29 7.1 Yes 71 1.08 Yes 0 0 No -28 0.76 Yes 42 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 10109269 + NM_001105562 UBE4B 1 1.76 1.92 56 6.98 78.34 57 5.41 No 33 0.16 No 0 0 No -27 0.56 No 43 62.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 10132511 + NM_001105562 UBE4B 1 2.37 2.1 61 11.76 97.38 28 10.74 Yes 15 1.46 Yes 27 0.67 Yes -27 0.57 No 43 60.69 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 10158649 + NM_001105562 UBE4B 1 0.73 0.6 31 8.4 88.4 37 5.65 Yes 57 1.19 Yes 0 0 No -37 0.64 No 34 70.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 10161100 + NM_001105562 UBE4B 1 0.24 0.22 13 4.63 87.25 27 5.67 Yes 18 1.09 Yes 0 0 No -30 0.55 No 44 61.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 10163128 + NM_001105562 UBE4B 1 0.24 0.18 10 9.98 85.55 28 6.4 Yes 15 0.47 No 0 0 No -27 0.95 Yes 43 96.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 10164388 + NM_001105562 UBE4B 1 0.4 0.44 24 8.53 92.78 28 5.66 Yes 68 -5.13 No 0 0 No -27 0.61 No 43 79.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 10182853 + NM_001105562 UBE4B 1 0.31 0.33 17 8.65 85.01 32 5.67 Yes 19 1.04 Yes 0 0 No -31 0.64 No 39 68.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 10187015 + NM_001105562 UBE4B 1 1.14 0.53 25 10.26 97.38 20 6.03 Yes 71 1.23 Yes 0 0 No -19 0.78 Yes 51 61.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 10207113 + NM_001105562 UBE4B 1 0.4 0.36 19 7.56 84.39 25 6.08 Yes 12 0.86 Yes 0 0 No -24 0.81 Yes 46 71.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 10226301 + NM_001105562 UBE4B 1 0.14 0.15 9 8.32 82.38 27 6.35 Yes 14 1.27 Yes 0 0 No -26 0.88 Yes 44 92.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 10226364 + NM_001105562 UBE4B 1 0.16 0.15 8 8.42 84.73 17 4.36 No 19 0.15 No 0 0 No -27 0.48 No 45 42.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 10230352 + NM_001105562 UBE4B 1 1.1 0.94 47 8.81 90.06 18 5.69 Yes 5 1.21 Yes 0 0 No -33 0.63 No 37 69.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 10231162 + NM_001105562 UBE4B 1 0.5 0.44 24 10.16 81.52 39 6.16 Yes 26 0.85 Yes 29 0.3 Yes -38 0.77 Yes 32 61.86 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 10232958 + NM_001105562 UBE4B 1 0.24 0.22 13 9.46 85.31 36 6.95 Yes 10 0.68 No 0 0 No -22 0.84 Yes 48 93.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23570920 + NM_019116 UBFD1 1 0.11 0.15 9 1.07 79.58 38 5.17 No 0 1.06 Yes 0 0 No -22 0.73 Yes 48 88.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23571078 + NM_019116 UBFD1 1 0.12 0.18 11 6.83 81.28 14 4.12 No 66 0.5 No 23 0.57 Yes -27 0.82 Yes 43 84.41 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 23571099 + NM_019116 UBFD1 1 1.23 1.72 57 5.21 92.62 18 4.9 No 5 0.58 No 23 0.57 Yes -21 0.5 No 49 56.13 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 23575359 + NM_019116 UBFD1 1 3.77 6.46 72 9.31 76.27 22 6.2 Yes 9 1.96 Yes 21 0.87 Yes -32 0.85 Yes 38 85.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 11338694 + NM_001330349 UBIAD1 1 0.29 0.22 14 9.66 90.02 31 4.94 No 18 0.25 No 0 0 No -24 0.7 Yes 46 79.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 30371049 - NM_007106 UBL3 1 0.17 0.1 7 7.03 80.16 30 6.74 Yes 49 1.23 Yes 0 0 No -29 0.68 Yes 41 75.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 9939008 + NM_024292 UBL5 1 0.2 0.11 7 0.78 0 14 2.94 No 31 2.13 Yes 0 0 No -43 0.48 No 27 85.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 9939243 + NM_024292 UBL5 1 0.03 0.21 11 -1.05 0 34 5.96 Yes 75 -3.69 No 26 0.51 Yes -31 0.57 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 9939255 + NM_024292 UBL5 1 0.07 0.6 32 -0.05 0 46 5.51 No NA NA NA 26 0.51 Yes -23 0.58 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 9939260 + NM_024292 UBL5 1 0.04 0.31 17 -3.84 0 10 7.42 Yes -3 1.37 Yes 26 0.51 Yes -10 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 9939262 + NM_024292 UBL5 1 0.13 1.01 43 -13.37 0 12 7.57 Yes -1 1.42 Yes 26 0.51 Yes -12 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 74740900 - NM_001286740 UBL7 1 4.45 5.54 71 2.74 79.01 23 6.03 Yes 49 1.72 Yes 22 0.93 Yes -22 0.91 Yes 48 92.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 74740929 - NM_001286740 UBL7 1 1.02 1.22 44 4.95 81.39 16 4.68 No 20 1.71 Yes 22 0.93 Yes -32 0.77 Yes 38 85.44 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 74741066 - NM_001286740 UBL7 1 0.14 0.18 11 6.72 90.01 27 6.08 Yes 14 0.55 No 0 0 No -26 0.9 Yes 44 86.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 74749025 - NM_001286740 UBL7 1 0.09 0.21 14 -5.75 0 10 3.71 No 22 0.15 No 21 0.55 Yes -39 0.38 No 61 19.4 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 74757377 + NR_038448 UBL7-AS1 1 7.69 0.88 38 4.07 0 36 8.49 Yes 69 -2.01 No 0 0 No -35 0.93 Yes 35 93.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 74757543 + NR_038448 UBL7-AS1 1 1.24 0.14 9 -0.41 0 26 6.08 Yes 13 0.99 Yes 0 0 No -25 0.85 Yes 45 93.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 74758356 + NR_038448 UBL7-AS1 1 1.39 0.14 9 8.16 85.17 62 8.99 Yes 49 0.99 Yes 26 0.93 Yes -52 0.2 No 34 61.14 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 74759307 + NR_038448 UBL7-AS1 1 3.91 0.47 25 2.79 0 40 5.1 No 72 0.64 No 0 0 No -39 0.79 Yes 42 74.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 158697371 + NM_145049 UBLCP1 1 0.11 0.24 14 -1.98 0 39 6.16 Yes 69 0.83 Yes 0 0 No -29 0.51 No 41 60.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 158705251 + NM_145049 UBLCP1 1 0.08 0.15 10 -5.29 0 15 3.7 No 9 0.58 No 0 0 No -27 0.55 No 43 56.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 158711913 + NM_145049 UBLCP1 1 0.14 0.29 18 -12.16 0 27 5.65 Yes 14 1.2 Yes 0 0 No -26 0.76 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 4904906 + NM_001288656 UBN1 1 0.68 0.61 32 5.85 85.02 18 6.99 Yes 72 0.88 Yes 0 0 No -30 0.5 No 42 57.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 4908830 + NM_001288656 UBN1 1 1.21 1.4 49 4.44 66.22 38 5.66 Yes 10 0.95 Yes 0 0 No -22 0.58 No 48 67.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 4908878 + NM_001288656 UBN1 1 0.27 0.32 19 3.24 62.18 28 4.2 No 58 0.91 Yes 27 0.82 Yes -27 0.82 Yes 43 77.53 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 4908901 + NM_001288656 UBN1 1 0.14 0.15 9 1.79 79.02 21 5.19 No 8 0.42 No 0 0 No -20 0.78 Yes 50 81.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4920217 + NM_001288656 UBN1 1 0.42 0.26 16 1.96 0 25 6.47 Yes 12 1.64 Yes 0 0 No -24 0.92 Yes 46 94.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4921075 + NM_001288656 UBN1 1 0.3 0.28 18 5.92 93.61 16 5.26 No 18 1 Yes 0 0 No -30 0.4 No 40 72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 4921982 + NM_001288656 UBN1 1 0.46 0.4 22 4.39 0 19 4.58 No 32 0.04 No 0 0 No -44 0.71 Yes 52 75.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 4922188 + NM_001288656 UBN1 1 0.26 0.24 14 10.39 82.21 24 6.86 Yes 66 0.53 No 0 0 No -31 0.6 No 39 67.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 4926875 + NM_001288656 UBN1 1 1.32 1.04 40 1.71 0 30 6.56 Yes 17 1.46 Yes 0 0 No -29 0.97 Yes 41 97.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4927023 + NM_001288656 UBN1 1 0.44 0.35 19 8.9 84.55 39 8.18 Yes 26 1.55 Yes 38 0.54 Yes -39 0.47 No 32 73.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 4927385 + NM_001288656 UBN1 1 694.6 64.17 72 12.34 94.89 45 8.47 Yes 32 0.69 No 44 0.72 Yes -44 0.94 Yes 26 91.84 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 138921753 + NM_173569 UBN2 1 16.63 1.63 55 -2.89 66.4 44 10.1 Yes 31 1.74 Yes 0 0 No -43 0.85 Yes 27 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 138949928 + NM_173569 UBN2 1 0.43 0.11 8 10.45 85.52 27 6.07 Yes 24 0.79 Yes 0 0 No -26 0.83 Yes 44 82.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 138954181 + NM_173569 UBN2 1 1.43 0.49 23 6.24 82.31 25 4.81 No 44 1.27 Yes 0 0 No -25 0.58 No 45 64.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 138978112 + NM_173569 UBN2 1 0.49 0.1 7 4.99 82.5 16 5.1 No 3 1.45 Yes 0 0 No -51 0.31 No 51 66.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 3090956 - NM_014948 UBOX5 1 14.09 1.24 48 -1.33 0 38 7.35 Yes 25 2.01 Yes 0 0 No -37 0.87 Yes 33 91.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 3090956 - NM_014948 UBOX5 1 2.02 0.19 10 -1.33 0 38 7.35 Yes 25 2.01 Yes 0 0 No -37 0.87 Yes 33 91.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 33432133 - NM_014517 UBP1 1 0.13 0.19 13 8.18 73.8 33 5.61 Yes 65 2.12 Yes 0 0 No -28 0.65 No 42 72.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 33432179 - NM_014517 UBP1 1 0.11 0.17 9 11.13 83.05 32 5.81 Yes 19 1.92 Yes 0 0 No -31 0.8 Yes 39 92.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 33438009 - NM_014517 UBP1 1 0.68 1.43 47 1.66 76.63 44 8.06 Yes 31 1.13 Yes 0 0 No -28 0.46 No 42 60.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 33438371 - NM_014517 UBP1 1 2.2 4.72 70 8.18 83.85 31 5.57 Yes 18 0.62 No 30 0.74 Yes -30 0.95 Yes 40 98.33 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 33440363 - NM_014517 UBP1 1 0.07 0.14 9 3.77 82.15 27 5.1 No 30 0.26 No 0 0 No -26 0.37 No 53 25.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 33445901 - NM_014517 UBP1 1 0.31 0.28 10 2.76 82.57 27 5.74 Yes 64 0.81 Yes 0 0 No -30 0.64 No 44 72.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 33450856 - NM_014517 UBP1 1 0.12 0.31 19 -7.69 0 14 4.24 No 35 0.58 No 23 0.61 Yes -13 0.62 No 61 29.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 33451111 - NM_014517 UBP1 1 0.12 0.36 19 5.77 77.49 13 5.29 No 18 0.58 No 24 0.61 Yes -30 0.81 Yes 40 67.93 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 33452538 - NM_014517 UBP1 1 0.17 0.46 25 4.63 86.51 27 5.1 No 2 0.22 No 0 0 No -26 0.74 Yes 20 68.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 33453178 - NM_014517 UBP1 1 0.06 0.15 11 -17.52 0 22 6.52 Yes 9 1.13 Yes 21 0.68 Yes -26 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 33457593 - NM_014517 UBP1 1 0.76 1.85 54 11.32 84.47 21 6.08 Yes 8 0.88 Yes 20 0.58 Yes -20 0.56 No 50 45.31 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 33465084 - NM_014517 UBP1 1 0.1 0.15 10 8.19 86.03 57 5.77 Yes 17 0.76 No 0 0 No -24 0.68 Yes 49 65.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 33467206 - NM_014517 UBP1 1 0.11 0.13 8 1.67 72.84 27 6.08 Yes 32 0.81 Yes 0 0 No -26 0.69 Yes 44 86.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86276849 - NM_053067 UBQLN1 1 0.1 0.35 21 0.39 0 11 3.86 No 14 0.81 Yes 0 0 No -26 0.83 Yes 44 89.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86281310 - NM_053067 UBQLN1 1 2.91 1.04 39 0.69 68.71 27 4.48 No 14 0.97 Yes 30 0.71 Yes -29 0.74 Yes 40 74.8 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 86281349 - NM_053067 UBQLN1 1 936.78 338.92 72 6.49 76.06 27 5.86 Yes 4 0.24 No 26 0.57 Yes -33 0.49 No 39 64.57 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 86283547 - NM_053067 UBQLN1 1 8 2.86 67 5.19 82.54 32 7.04 Yes 19 1.26 Yes 0 0 No -31 0.71 Yes 39 77.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86284222 - NM_053067 UBQLN1 1 0.15 0.56 30 1.82 75.78 24 5.1 No 63 1.01 Yes 20 0.38 Yes -23 0.91 Yes 47 64.35 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 86284239 - NM_053067 UBQLN1 1 0.17 0.58 29 -3.78 0 34 6.93 Yes 46 1.02 Yes 20 0.38 Yes -34 0.61 No 36 78.2 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 86292471 - NM_053067 UBQLN1 1 0.07 0.25 15 1.62 0 42 7.63 Yes 29 0.86 Yes 0 0 No -41 0.91 Yes 29 92.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 86319737 - NM_053067 UBQLN1 1 0.52 1.78 53 4.74 84.41 29 5.85 Yes 25 1.35 Yes 0 0 No -26 0.62 No 44 69.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 156011983 - NM_001304342 UBQLN4 1 0.12 0.1 7 2.44 79.55 43 6.89 Yes 24 0.39 No 0 0 No -36 0.8 Yes 34 60.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 156012169 - NM_001304342 UBQLN4 1 0.58 0.51 25 7.7 76.14 15 5.95 Yes 48 2.11 Yes 0 0 No -24 0.67 Yes 46 85.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156015522 - NM_001304342 UBQLN4 1 0.48 0.19 10 2.39 78.03 9 5.1 No 69 1.01 Yes 0 0 No -27 0.84 Yes 43 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 156021142 - NM_001304342 UBQLN4 1 0.16 0.13 9 7.12 82.54 11 4.88 No -2 0.75 No 28 0.89 Yes -36 0.85 Yes 34 94.85 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 156021585 - NM_001304342 UBQLN4 1 8.13 3.46 69 6.96 89.18 22 5.28 No 73 1.74 Yes 0 0 No -21 0.82 Yes 46 66.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 43262820 - NM_174916 UBR1 1 0.19 0.15 9 7.42 85.52 29 5.65 Yes 1 0.25 No 23 0.79 Yes -28 0.63 No 48 44.09 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 43282286 - NM_174916 UBR1 1 0.55 0.35 23 6.02 85.24 36 5.5 No 65 1.18 Yes 0 0 No -23 0.37 No 47 45.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43296126 - NM_174916 UBR1 1 2.04 2 61 0.3 69.48 45 6.04 Yes 32 1.97 Yes 0 0 No -47 0.48 No 23 72.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 43296141 - NM_174916 UBR1 1 0.18 0.18 10 3.1 0 30 5.32 No 17 1.92 Yes 44 0.52 Yes -32 0.5 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 43305674 - NM_174916 UBR1 1 0.14 0.13 9 6.69 86.29 26 5.2 No 13 0.22 No 0 0 No -25 0.93 Yes 45 97.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 43328545 - NM_174916 UBR1 1 1.05 0.81 38 6.54 83.96 31 7.18 Yes -1 0.31 No 0 0 No -33 0.65 No 37 81.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 43330079 - NM_174916 UBR1 1 0.33 0.18 12 -10.17 80.14 30 5.19 No 3 1.32 Yes 0 0 No -25 0.26 No 43 48.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 43345339 - NM_174916 UBR1 1 0.16 0.15 7 3.45 62.19 41 7.24 Yes 28 1.36 Yes 0 0 No -34 0.9 Yes 36 94.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43367449 - NM_174916 UBR1 1 1.57 1.65 56 11.11 86.21 17 5.04 No 40 -2.37 No 0 0 No -29 0.75 Yes 41 77.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 43384279 - NM_174916 UBR1 1 0.96 0.69 34 1.84 83.57 20 5.61 Yes 7 0.41 No 20 0.23 Yes -20 0.55 No 50 57.15 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 42560247 + NM_015255 UBR2 1 0.27 0.15 10 3.02 72.38 40 5.87 Yes 1 0.74 No 0 0 No -39 0.88 Yes 31 67.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 42560598 + NM_015255 UBR2 1 1.02 0.56 19 7.07 91.81 41 6.86 Yes 61 0.37 No 0 0 No -28 0.5 No 32 47.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42579910 + NM_015255 UBR2 1 0.96 0.78 29 -5.13 81.65 32 6.43 Yes 54 1.16 Yes 0 0 No -31 0.65 No 39 65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 42583746 + NM_015255 UBR2 1 0.21 0.14 9 -3.15 0 13 3.24 No 10 1.05 Yes 0 0 No -30 0.87 Yes 35 83.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42601985 + NM_015255 UBR2 1 2.18 1.54 52 11.71 87.91 14 6.26 Yes 75 1.28 Yes 31 0.36 Yes -31 0.47 No 39 70.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 42611955 + NM_015255 UBR2 1 1.85 1.33 51 -5.18 0 50 8.31 Yes 37 1.71 Yes 0 0 No -49 0.87 Yes 21 75.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42625952 + NM_015255 UBR2 1 0.12 0.1 7 7.63 89.17 41 7.28 Yes 4 0.43 No 31 0.66 Yes -22 0.75 Yes 48 52.22 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 42628191 + NM_015255 UBR2 1 0.19 0.17 12 9.33 88.24 17 5.41 No 70 -2.48 No 0 0 No -22 0.41 No 48 50.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 42631015 + NM_015255 UBR2 1 1.72 1.26 53 4.08 73.46 30 5.35 No 27 0.96 Yes 0 0 No -29 0.79 Yes 41 90.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42633163 + NM_015255 UBR2 1 0.16 0.14 9 1.29 82.28 12 4.78 No 29 0.89 Yes 0 0 No -41 0.64 No 51 38.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 42633149 + NM_015255 UBR2 1 7.88 7.22 72 6.79 94.38 28 7.4 Yes 15 0.9 Yes 0 0 No -27 0.72 Yes 43 60.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 42633882 + NM_015255 UBR2 1 0.39 0.31 15 3.53 65.46 29 5.82 Yes 36 0.62 No 26 0.74 Yes -28 0.32 No 42 64.01 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 42644502 + NM_015255 UBR2 1 0.22 0.17 9 -13.81 0 12 3.87 No 38 0.97 Yes 23 0.67 Yes -23 0.27 No 41 19.47 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 42644523 + NM_015255 UBR2 1 1.44 1.03 43 1.48 78.94 24 5.46 No 59 0.97 Yes 0 0 No -23 0.84 Yes 47 88.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 42656724 + NM_015255 UBR2 1 0.45 0.28 13 -0.23 0 21 4.57 No 71 -4.94 No 0 0 No -20 0.84 Yes 50 84.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 42656727 + NM_015255 UBR2 1 0.21 0.13 7 0.59 79.24 24 4.88 No 74 -5.13 No 0 0 No -23 0.84 Yes 47 80.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 170687246 + NM_172070 UBR3 1 0.2 0.15 10 6.46 83.96 129 10.72 Yes 16 0.71 No 0 0 No -28 0.66 Yes 42 66.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 170732303 + NM_172070 UBR3 1 4.9 5.38 72 7.59 91.63 28 6.09 Yes 26 1.32 Yes 0 0 No -32 0.58 No 38 60.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 170733989 + NM_172070 UBR3 1 0.46 0.26 13 5.55 78.48 36 6.17 Yes 62 1.13 Yes 22 0.88 Yes -27 0.72 Yes 35 72.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 170754192 + NM_172070 UBR3 1 0.18 0.15 9 3.6 85.02 17 6.87 Yes 4 1.2 Yes 0 0 No -30 0.61 No 37 58.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 170785233 + NM_172070 UBR3 1 0.45 0.46 24 -3.15 0 25 7.68 Yes 12 1.4 Yes 27 0.91 Yes -24 0.66 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 170806394 + NM_172070 UBR3 1 0.51 0.29 17 2.45 78.84 25 4.74 No -1 -1.97 No 0 0 No -22 0.6 No 48 80.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 170810775 + NM_172070 UBR3 1 0.19 0.15 11 4.64 0 30 10.39 Yes 17 0.94 Yes 0 0 No -30 0.74 Yes 40 63.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 170820902 + NM_172070 UBR3 1 0.77 0.68 22 0.36 72.44 37 6.26 Yes 32 0.27 No 23 0.58 Yes -37 0.58 No 33 87.31 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 170821319 + NM_172070 UBR3 1 0.4 0.35 22 5.64 77.87 25 6.22 Yes 12 1.54 Yes 0 0 No -24 0.92 Yes 46 89.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 170821338 + NM_172070 UBR3 1 0.23 0.22 10 3.05 83.4 15 5.29 No 31 1.53 Yes 20 0.31 Yes -30 0.5 No 40 90.33 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 170870350 + NM_172070 UBR3 1 2.12 1.13 41 10.69 94.63 15 5.38 No 2 0.84 Yes 22 0.42 Yes -22 0.79 Yes 48 71.36 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 170870414 + NM_172070 UBR3 1 0.36 0.18 11 4.18 79.72 27 7.38 Yes 14 1.03 Yes 0 0 No -26 0.81 Yes 44 66.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 170871324 + NM_172070 UBR3 1 0.47 0.26 17 8.4 83.51 28 6.16 Yes 15 0.6 No 24 0.76 Yes -27 0.56 No 43 70.98 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 170873342 + NM_172070 UBR3 1 0.27 0.19 10 7.16 88.44 29 5.26 No 3 0.45 No 24 0.66 Yes -28 0.66 No 42 71.02 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 170879667 + NM_172070 UBR3 1 0.2 0.15 10 10.25 89.4 22 5.29 No 9 0.39 No 0 0 No -26 0.62 No 44 79.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 170910328 + NM_172070 UBR3 1 0.33 0.33 20 2.86 78.82 23 4.78 No 71 0.52 No 0 0 No -22 0.8 Yes 44 51.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 170923548 + NM_172070 UBR3 1 1.72 1 42 9.03 88.9 29 5.36 No 20 0.5 No 0 0 No -28 0.76 Yes 42 54.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 19403394 - NM_020765 UBR4 1 0.17 0.25 15 1.89 73.52 38 6.43 Yes 29 0.99 Yes 0 0 No -37 0.89 Yes 33 92.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 19404948 - NM_020765 UBR4 1 0.1 0.13 8 9 77.09 34 5.99 Yes 21 0.73 No 0 0 No -33 0.34 No 42 39.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 19405937 - NM_020765 UBR4 1 0.28 0.35 21 8.73 88.96 22 5.99 Yes 9 0.52 No 0 0 No -21 0.65 No 49 61.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 19408689 - NM_020765 UBR4 1 0.26 0.29 17 4.41 74.1 42 5.49 No 29 0.63 No 0 0 No -27 0.71 Yes 43 72.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 19411551 - NM_020765 UBR4 1 0.16 0.31 17 4.57 83.9 23 5.1 No 2 0.72 No 0 0 No -22 0.8 Yes 48 55.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 19412795 - NM_020765 UBR4 1 0.48 0.67 32 0.11 72.37 32 5.78 Yes 67 0.96 Yes 32 0.38 Yes -26 0.25 No 60 59.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 19428130 - NM_020765 UBR4 1 1.04 1.19 46 -2.47 0 14 3.87 No 19 1.41 Yes 25 0.92 Yes -31 0.81 Yes 39 90.13 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 19430032 - NM_020765 UBR4 1 0.09 0.1 7 5.41 90.92 28 4.21 No 3 0.8 Yes 0 0 No -27 0.51 No 14 64.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19431381 - NM_020765 UBR4 1 0.17 0.17 10 5.85 79.5 24 6.53 Yes 11 0.29 No 0 0 No -23 0.51 No 44 45.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 19437753 - NM_020765 UBR4 1 0.09 0.11 7 6.45 84.58 27 5.99 Yes 14 0.64 No 0 0 No -26 0.76 Yes 44 71.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 19452194 - NM_020765 UBR4 1 0.58 0.68 29 8.54 86.58 55 8.53 Yes 42 1.63 Yes 32 0.77 Yes -32 0.76 Yes 38 83.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 19465709 - NM_020765 UBR4 1 4.94 4.67 69 0.38 0 9 3.87 No 16 1.32 Yes 0 0 No -26 0.56 No 42 66.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19465709 - NM_020765 UBR4 1 0.12 0.11 7 0.38 0 9 3.87 No 16 1.32 Yes 0 0 No -26 0.56 No 42 66.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19465733 - NM_020765 UBR4 1 1.47 1.43 53 6.03 74.73 63 7.49 Yes 64 1.01 Yes 22 0.9 Yes -59 0.34 No 11 45.41 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 19467383 - NM_020765 UBR4 1 0.25 0.26 17 1.48 0 25 6.86 Yes 12 1.8 Yes 0 0 No -24 0.97 Yes 46 95.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 19468269 - NM_020765 UBR4 1 4.14 5.17 71 -13.24 72.27 25 6 Yes 12 0.84 Yes 0 0 No -24 0.8 Yes 46 88.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 19472173 - NM_020765 UBR4 1 0.28 0.42 22 7.28 89.75 16 5.88 Yes 61 1.29 Yes 0 0 No -25 0.77 Yes 45 84.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 19472425 - NM_020765 UBR4 1 9.56 9.94 72 3.75 77.55 27 5.88 Yes 14 0.85 Yes 0 0 No -36 0.56 No 34 65.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19472601 - NM_020765 UBR4 1 3.52 3.63 68 6.94 89.34 35 9.52 Yes 22 1.25 Yes 34 0.68 Yes -34 0.86 Yes 36 92.2 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 19474742 - NM_020765 UBR4 1 0.08 0.11 8 11.98 92.4 34 5.08 No 14 1.43 Yes 0 0 No -26 0.5 No 44 47.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19476290 - NM_020765 UBR4 1 0.17 0.25 17 7.37 73.32 43 6.64 Yes 36 2.06 Yes 42 0.77 Yes -42 0.91 Yes 28 96.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 19478299 - NM_020765 UBR4 1 0.15 0.25 16 -1.55 75.96 25 4.42 No 66 0.93 Yes 0 0 No -25 0.36 No 48 28.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19478384 - NM_020765 UBR4 1 0.49 0.69 32 -3.65 0 21 3.91 No 73 -6.51 No 23 0.86 Yes -20 0.36 No 56 37.99 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 19480394 - NM_020765 UBR4 1 0.38 0.39 22 7.13 82.81 24 5.48 No 54 1.4 Yes 23 0.74 Yes -24 0.53 No 43 60.83 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 19480449 - NM_020765 UBR4 1 3.89 4.38 70 3.28 68.52 20 6.54 Yes -1 1.08 Yes 26 0.9 Yes -23 0.48 No 51 67.71 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 19481573 - NM_020765 UBR4 1 6.59 8.63 72 4.71 83.46 27 5.67 Yes 14 0.05 No 26 0.77 Yes -26 0.67 Yes 44 61.5 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 19482852 - NM_020765 UBR4 1 1.1 1.25 46 6.58 85.71 38 5.54 No 39 0.83 Yes 0 0 No -37 0.57 No 47 59.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19486745 - NM_020765 UBR4 1 0.1 0.17 10 6.98 77.83 34 5.52 No 21 0.84 Yes 0 0 No -33 0.47 No 37 72.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 19488344 - NM_020765 UBR4 1 0.12 0.19 12 4.9 75.24 45 7.07 Yes 14 0.77 Yes 0 0 No -27 0.52 No 40 59.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19488409 - NM_020765 UBR4 1 0.08 0.13 7 0.08 61.65 31 5.57 Yes 44 0.25 No 22 0.84 Yes -30 0.65 No 18 39.21 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 19490318 - NM_020765 UBR4 1 0.22 0.26 15 -7.77 0 48 9.07 Yes 35 1.19 Yes 0 0 No -47 0.65 No 23 71.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 19492271 - NM_020765 UBR4 1 0.44 0.44 25 -1.3 62.02 28 5.39 No 63 -5.15 No 22 0.68 Yes -15 0.61 No 55 45.94 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 19493725 - NM_020765 UBR4 1 0.05 0.1 7 -14.17 0 28 6.83 Yes 15 1.97 Yes 0 0 No -27 0.59 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19496886 - NM_020765 UBR4 1 0.12 0.17 11 10.93 94.47 26 7.75 Yes 64 0.08 No 0 0 No -25 0.6 No 45 80.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 19499546 - NM_020765 UBR4 1 0.59 0.89 41 8.5 80.43 21 5.83 Yes 25 0.93 Yes 0 0 No -20 0.61 No 46 48.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 19503239 - NM_020765 UBR4 1 0.69 0.78 34 8.12 89.64 25 5.6 Yes 12 1.72 Yes 24 0.88 Yes -24 0.91 Yes 46 93.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 19509234 - NM_020765 UBR4 1 0.09 0.13 9 6.14 77.07 27 6.22 Yes 74 0.97 Yes 0 0 No -26 0.9 Yes 44 91.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 19510570 - NM_020765 UBR4 1 0.39 0.46 26 8.45 90.66 17 4.8 No 4 0.78 Yes 0 0 No -21 0.51 No 49 71.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 103269975 - NM_001282873 UBR5 1 0.06 0.17 10 -1.33 55.82 20 3.97 No 61 0.8 Yes 31 0.56 Yes -16 0.38 No 54 39.17 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 103270653 - NM_001282873 UBR5 1 1.28 3.46 66 3.14 78.34 28 6.48 Yes 68 -2.15 No 27 0.85 Yes -27 0.9 Yes 43 88.57 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 103270983 - NM_001282873 UBR5 1 0.15 0.43 20 8.4 88.05 27 6.67 Yes 14 1.47 Yes 0 0 No -27 0.56 No 43 76.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 103273903 - NM_001282873 UBR5 1 0.62 1 36 5.27 86.67 26 5.1 No 53 0.22 No 0 0 No -25 0.74 Yes 45 73.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103275608 - NM_001282873 UBR5 1 0.06 0.15 11 2.96 0 38 6.57 Yes 25 1.59 Yes 0 0 No -37 0.75 Yes 33 93.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 103277507 - NM_001282873 UBR5 1 777.19 232.04 72 4.13 75.49 15 5.77 Yes 76 1.42 Yes 22 0.92 Yes -22 0.95 Yes 48 95.13 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 103279535 - NM_001282873 UBR5 1 0.06 0.14 9 8.88 80.97 24 6.84 Yes 11 1.3 Yes 0 0 No -23 0.85 Yes 47 83.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 103281740 - NM_001282873 UBR5 1 0.21 0.61 31 5.08 91.09 25 5.39 No 12 0.74 No 0 0 No -24 0.83 Yes 46 86.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103283046 - NM_001282873 UBR5 1 0.22 0.57 28 6.82 96.25 20 4.61 No 64 1.43 Yes 0 0 No -20 0.83 Yes 50 75.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 103283060 - NM_001282873 UBR5 1 0.07 0.17 7 -0.5 71.86 17 4.8 No 50 1.43 Yes 0 0 No -58 0.54 No 20 64.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103283496 - NM_001282873 UBR5 1 0.1 0.31 20 2.15 76.31 24 5.13 No 58 0.85 Yes 29 0.8 Yes -33 0.68 Yes 37 64.33 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 103286951 - NM_001282873 UBR5 1 0.15 0.46 21 1.39 0 37 6.56 Yes 24 0.3 No 0 0 No -36 0.76 Yes 34 92.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103291395 - NM_001282873 UBR5 1 1.62 5.92 70 9.91 89.58 28 3.57 No 3 1.26 Yes 0 0 No -27 0.47 No 45 50.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103297473 - NM_001282873 UBR5 1 4.06 11.08 72 2.94 70.3 31 5.69 Yes 61 0.03 No 0 0 No -24 0.76 Yes 46 71.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103297473 - NM_001282873 UBR5 1 0.26 0.72 30 2.94 70.3 31 5.69 Yes 61 0.03 No 0 0 No -24 0.76 Yes 46 71.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103297581 - NM_001282873 UBR5 1 0.04 0.11 8 5.22 76.28 12 4.89 No -2 0.82 Yes 24 0.62 Yes -25 0.44 No 45 75.86 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 103300462 - NM_001282873 UBR5 1 0.08 0.15 9 -12.87 0 21 5.2 No 65 -6.35 No 0 0 No -53 0.51 No 54 54.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 103300508 - NM_001282873 UBR5 1 0.08 0.17 12 -1.31 62.08 27 5.48 No 19 -3.4 No 20 0.62 Yes -26 0.78 Yes 44 79.36 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 103306337 - NM_001282873 UBR5 1 0.1 0.32 20 -0.54 0 11 3.71 No 6 0.07 No 0 0 No -32 0.86 Yes 38 83.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103306586 - NM_001282873 UBR5 1 0.07 0.24 14 3.27 67.86 58 7.7 Yes 45 1.16 Yes 0 0 No -31 0.76 Yes 39 69.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 103307334 - NM_001282873 UBR5 1 0.17 0.51 29 0.85 0 10 3.87 No 72 0.65 No 0 0 No -31 0.76 Yes 34 59.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 103307553 - NM_001282873 UBR5 1 0.06 0.25 13 2.2 0 14 3.87 No 15 0.77 No 0 0 No -27 0.71 Yes 43 74.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103308041 - NM_001282873 UBR5 1 0.04 0.11 7 4.47 68.27 39 6.94 Yes 66 0.46 No 32 0.71 Yes -33 0.65 No 37 67.51 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 103309230 - NM_001282873 UBR5 1 0.26 0.44 24 3.66 76.07 20 4.83 No 61 0.28 No 22 0.81 Yes -25 0.5 No 51 65.26 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 103311188 - NM_001282873 UBR5 1 0.3 0.69 28 4.42 0 20 4.24 No 52 0.27 No 0 0 No -20 0.68 Yes 50 56.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 103311722 - NM_001282873 UBR5 1 0.45 1 43 0.98 79.65 49 6.5 Yes 36 1 Yes 0 0 No -48 0.45 No 22 87.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 103311725 - NM_001282873 UBR5 1 4.24 9.36 72 4.62 83.95 46 6.34 Yes 33 1.01 Yes 34 0.44 Yes -45 0.47 No 25 80.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 103314607 - NM_001282873 UBR5 1 0.08 0.15 10 3.19 81.77 32 5.5 No 7 0.34 No 0 0 No -29 0.73 Yes 41 72.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103314710 - NM_001282873 UBR5 1 1.76 3.49 68 8.06 90.02 22 6.06 Yes 9 1.19 Yes 0 0 No -21 0.48 No 49 60.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103315226 - NM_001282873 UBR5 1 0.05 0.1 7 8.43 97.58 33 5.81 Yes 34 0.05 No 0 0 No -27 0.51 No 44 71.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 103316395 - NM_001282873 UBR5 1 0.12 0.35 24 2.89 77.08 29 6.44 Yes 16 1.02 Yes 25 0.8 Yes -28 0.74 Yes 42 74.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 103317529 - NM_001282873 UBR5 1 0.04 0.14 9 -2.79 69.79 32 4.99 No -1 1.28 Yes 36 0.53 Yes -31 0.96 Yes 39 97.63 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 103324055 - NM_001282873 UBR5 1 0.19 0.5 29 8.18 89.77 13 5.37 No 65 -3.57 No 0 0 No -26 0.75 Yes 44 85.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103324498 - NM_001282873 UBR5 1 0.09 0.29 14 -4.96 0 18 3.79 No 18 1.13 Yes 28 0.74 Yes -30 0.76 Yes 40 62.46 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 103324603 - NM_001282873 UBR5 1 0.11 0.24 15 13.71 94.05 21 5.92 Yes 8 2.55 Yes 0 0 No -20 0.74 Yes 50 93.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 103327460 - NM_001282873 UBR5 1 0.15 0.5 23 11.34 93.23 29 9.02 Yes 31 1.97 Yes 0 0 No -28 0.92 Yes 42 97.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 103335593 - NM_001282873 UBR5 1 0.04 0.13 8 0.52 0 9 3.59 No 69 -5.52 No 0 0 No -20 0.72 Yes 48 57.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 103336845 - NM_001282873 UBR5 1 0.1 0.29 15 1.23 68.17 45 8.1 Yes 61 1.18 Yes 0 0 No -35 0.61 No 35 78.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 103354895 - NM_001282873 UBR5 1 44.6 53.86 72 9.13 80.02 21 5.2 No 23 1.04 Yes 25 0.72 Yes -25 0.87 Yes 45 82.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 103356405 - NM_001282873 UBR5 1 0.41 0.49 25 8.75 95.1 73 7.38 Yes 60 0.91 Yes 0 0 No -32 0.35 No 38 52.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103357772 - NM_001282873 UBR5 1 0.18 0.78 39 -2.68 84.33 23 5.74 Yes 10 1.29 Yes 0 0 No -26 0.93 Yes 44 89.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 103377695 - NM_001282873 UBR5 1 0.16 0.25 15 9.65 88.27 28 5.41 No 65 1.13 Yes 0 0 No -27 0.51 No 43 50.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103380996 - NM_001282873 UBR5 1 0.08 0.13 8 6.72 88.34 13 5.1 No 0 1.09 Yes 0 0 No -26 0.37 No 44 54.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 103403390 - NM_001282873 UBR5 1 0.89 1.5 51 6.05 0 29 5.36 No 16 0.74 No 0 0 No -28 0.93 Yes 42 95.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103406987 - NM_001282873 UBR5 1 0.08 0.14 9 6.48 87.33 29 5.52 No 7 0.33 No 0 0 No -28 0.84 Yes 42 90.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 103262342 + NR_125415 UBR5-AS1 1 3.22 0.28 14 12.55 95.65 22 6.2 Yes 9 1.33 Yes 0 0 No -21 0.63 No 49 75.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 93685561 + NM_175748 UBR7 1 0.05 0.11 8 0.42 0 17 4.76 No 72 0.36 No 0 0 No -24 0.82 Yes 46 80.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 93685561 + NM_175748 UBR7 1 0.66 1.32 49 0.42 0 17 4.76 No 72 0.36 No 0 0 No -24 0.82 Yes 46 80.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 93686631 + NM_175748 UBR7 1 0.39 0.65 30 7.49 88.79 12 4.42 No 70 1.75 Yes 0 0 No -26 0.55 No 52 45.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 93690467 + NM_175748 UBR7 1 0.08 0.11 7 6.42 78.28 25 5.92 Yes 12 1.85 Yes 0 0 No -24 0.9 Yes 46 86.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 171658081 - NM_152277 UBTD2 1 0.11 0.11 8 5.32 82.81 20 5.1 No 0 -1.46 No 0 0 No -26 0.74 Yes 44 77.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 171669533 - NM_152277 UBTD2 1 0.21 0.11 8 8.82 86.48 16 5.33 No 3 1.51 Yes 0 0 No -33 0.63 No 37 54.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 171679022 - NM_152277 UBTD2 1 0.4 0.22 12 10.76 95.05 36 6.12 Yes 23 0.91 Yes 0 0 No -35 0.66 No 35 66.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 171685723 - NM_152277 UBTD2 1 0.65 0.42 18 1.87 0 22 4.58 No 14 0.09 No 0 0 No -26 0.55 No 44 74.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 171702218 - NM_152277 UBTD2 1 0.28 0.17 11 4.68 86.07 23 5.1 No 47 0.4 No 0 0 No -22 0.97 Yes 48 98.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 42284963 - NR_045058 UBTF 1 0.17 0.42 26 -18.17 63.59 25 6.32 Yes 12 1.74 Yes 0 0 No -24 0.85 Yes 46 85.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42286038 - NR_045058 UBTF 1 0.4 0.99 42 2.15 0 30 6.48 Yes 17 0.93 Yes 0 0 No -29 0.91 Yes 41 87.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42286370 - NR_045058 UBTF 1 0.25 0.63 30 2.24 80.12 20 7.14 Yes 7 1.16 Yes 19 0.72 Yes -19 0.62 No 51 79.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 42286373 - NR_045058 UBTF 1 0.11 0.26 18 3.6 85.02 17 6.93 Yes 4 1.2 Yes 19 0.72 Yes -29 0.39 No 54 57.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 42287100 - NR_045058 UBTF 1 0.05 0.14 9 -6 75.4 19 5.5 No 6 1.66 Yes 0 0 No -24 0.9 Yes 46 86.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42287588 - NR_045058 UBTF 1 0.24 0.75 37 -4.56 61.11 12 4.9 No 39 1.56 Yes 0 0 No -35 0.77 Yes 35 40.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 42288694 - NR_045058 UBTF 1 0.07 0.15 10 -6.17 0 9 3.87 No 13 2 Yes 0 0 No -31 0.44 No 39 64.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 42288699 - NR_045058 UBTF 1 0.06 0.15 9 -12.33 0 27 5.07 No 8 2.04 Yes 0 0 No -26 0.49 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 42288753 - NR_045058 UBTF 1 0.08 0.19 9 1.96 0 11 4.12 No 15 1.08 Yes 0 0 No -27 0.87 Yes 43 53.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 42289110 - NR_045058 UBTF 1 0.08 0.21 11 -3.58 0 11 3.87 No 28 0.98 Yes 0 0 No -40 0.95 Yes 30 94.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 42291125 - NR_045058 UBTF 1 0.2 0.6 29 6.54 76.14 31 6.4 Yes 3 0.33 No 0 0 No -28 0.74 Yes 42 78.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 62444133 - NM_001286078 UBXN1 1 0.09 0.21 14 0.5 72.79 20 3.99 No 46 -2.06 No 24 0.85 Yes -19 0.45 No 51 57.46 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 62445032 - NM_001286078 UBXN1 1 0.24 0.93 42 4.57 0 29 5.35 No 65 -3.9 No 0 0 No -28 0.42 No 42 52.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62445036 - NM_001286078 UBXN1 1 0.5 1.99 62 9.14 83.78 25 5.03 No 61 -3.89 No 24 0.6 Yes -24 0.43 No 46 53.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 26609507 - NM_183008 UBXN11 1 0.47 0.18 9 4.9 75.27 27 7.5 Yes 14 1.44 Yes 0 0 No -26 0.97 Yes 44 96.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 26610703 - NM_183008 UBXN11 1 0.88 0.26 14 2.33 79.16 24 4.63 No 62 0.24 No 0 0 No -23 0.69 Yes 47 75.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 26610773 - NM_183008 UBXN11 1 0.78 0.21 14 1.16 65.29 32 5.59 Yes 65 0.05 No 25 0.74 Yes -25 0.75 Yes 45 31.06 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 26610953 - NM_183008 UBXN11 1 1.88 0.25 16 5.69 76.66 15 4.67 No 52 0.4 No 0 0 No -47 0.56 No 56 63.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 26623516 - NM_183008 UBXN11 1 1.24 0.33 18 4.81 76.37 26 5 No 13 0.84 Yes 26 0.91 Yes -25 0.89 Yes 45 91.04 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 24175339 + NM_181713 UBXN2A 1 2.52 1.11 44 1.26 0 41 8.46 Yes 28 1.59 Yes 0 0 No -40 0.77 Yes 30 83.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24180027 + NM_181713 UBXN2A 1 0.32 0.11 8 0.66 0 10 4 No 22 0.21 No 0 0 No -49 0.72 Yes 21 74.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 24191784 + NM_181713 UBXN2A 1 0.39 0.21 10 2.3 84.41 41 7.21 Yes 28 1.04 Yes 44 0.31 Yes -45 0.65 No 25 78.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 24191788 + NM_181713 UBXN2A 1 5.44 3.06 63 3.01 0 45 7.48 Yes 32 1.02 Yes 44 0.31 Yes -49 0.68 Yes 21 79.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 24210347 + NM_181713 UBXN2A 1 2.27 2.08 60 2.33 68.25 47 6.04 Yes 34 0.99 Yes 0 0 No -33 0.44 No 37 70.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 24221144 + NM_181713 UBXN2A 1 0.19 0.14 10 8.17 81.6 59 7.45 Yes 15 0.88 Yes 0 0 No -27 0.78 Yes 43 90.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 24222524 + NM_181713 UBXN2A 1 0.8 0.69 34 3.28 67.18 31 6.35 Yes 64 0.42 No 21 0.8 Yes -26 0.6 No 40 74.31 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 59325857 + NM_001077619 UBXN2B 1 24.6 5.54 71 7.25 81.58 17 4.59 No 54 0.94 Yes 23 0.84 Yes -23 0.83 Yes 47 84.44 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 59345728 + NM_001077619 UBXN2B 1 0.79 0.38 17 5.61 0 13 4.36 No 52 1.15 Yes 0 0 No -28 0.76 Yes 42 83.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 59347416 + NM_001077619 UBXN2B 1 19.35 7.82 71 5.15 87.75 28 5.82 Yes 15 1.41 Yes 27 0.92 Yes -27 0.76 Yes 43 92.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 59352652 + NM_001077619 UBXN2B 1 0.43 0.19 11 9.26 89.57 32 5.73 Yes 44 1.08 Yes 0 0 No -31 0.68 Yes 39 67.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 59358554 + NM_001077619 UBXN2B 1 0.39 0.15 8 5.27 75.28 28 5.35 No 15 0.45 No 0 0 No -28 0.87 Yes 42 87.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136500111 + NM_014607 UBXN4 1 0.42 0.68 32 5.42 78.72 22 7.14 Yes 9 2.31 Yes 0 0 No -21 0.82 Yes 49 90.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136504465 + NM_014607 UBXN4 1 0.07 0.11 7 9.91 87.82 22 5.17 No 9 0.89 Yes 0 0 No -21 0.9 Yes 49 90.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136505227 + NM_014607 UBXN4 1 0.5 0.78 37 11.8 84.03 41 5.27 No 75 -3.37 No 27 0.34 Yes -27 0.49 No 44 60.91 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 136508618 + NM_014607 UBXN4 1 0.04 0.13 7 7.28 85.02 28 7.68 Yes 15 1.54 Yes 0 0 No -27 0.96 Yes 43 96.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136511709 + NM_014607 UBXN4 1 0.06 0.14 8 2.12 60.95 33 6.76 Yes 20 0.62 No 26 0.71 Yes -27 0.42 No 43 43.62 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 136511709 + NM_014607 UBXN4 1 1.03 2.15 64 2.12 60.95 33 6.76 Yes 20 0.62 No 26 0.71 Yes -27 0.42 No 43 43.62 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 136513197 + NM_014607 UBXN4 1 0.17 0.43 22 2.1 65.19 24 7.84 Yes 11 0.2 No 0 0 No -23 0.85 Yes 47 88.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136512996 + NM_014607 UBXN4 1 0.22 0.51 26 8.22 86.24 30 5.31 No 25 0.57 No 0 0 No -29 0.95 Yes 41 93.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136530888 + NM_014607 UBXN4 1 0.24 0.58 26 9.82 83.15 58 6.53 Yes 11 0.83 Yes 0 0 No -23 0.8 Yes 47 70 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136531803 + NM_014607 UBXN4 1 0.07 0.17 11 4.3 81.05 30 5.42 No 24 0.48 No 0 0 No -29 0.71 Yes 41 86.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136533027 + NM_014607 UBXN4 1 0.2 0.53 28 3.98 77.68 20 5.9 Yes 7 0.36 No 0 0 No -19 0.62 No 51 78.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 136536496 + NM_014607 UBXN4 1 0.03 0.11 7 0.07 0 16 4.54 No 17 0.85 Yes 24 0.66 Yes -38 0.63 No 32 82.03 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 136536551 + NM_014607 UBXN4 1 0.03 0.11 7 1.34 77 19 6.39 Yes 0 1.08 Yes 0 0 No -18 0.75 Yes 52 77.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136537871 + NM_014607 UBXN4 1 0.04 0.13 9 4.22 76.97 21 4.9 No 8 0.06 No 0 0 No -20 0.89 Yes 50 89.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136539092 + NM_014607 UBXN4 1 0.15 0.5 28 10.01 85.02 29 5.71 Yes 16 0.55 No 0 0 No -28 0.46 No 42 86.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 4446715 - NM_001171091 UBXN6 1 0.81 1.03 42 -2.8 67.13 28 6.16 Yes 15 1.43 Yes 23 0.74 Yes -27 0.74 Yes 43 80.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 196089416 - NM_015562 UBXN7 1 0.31 0.44 24 6.23 90.64 23 4.04 No 4 1.1 Yes 0 0 No -22 0.86 Yes 48 70 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 196106813 - NM_015562 UBXN7 1 0.35 0.46 30 8.65 86.83 29 4.75 No 31 1.38 Yes 0 0 No -28 0.66 No 42 75.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 196117595 - NM_015562 UBXN7 1 0.35 0.49 24 2.68 83.84 28 5.75 Yes 73 1.36 Yes 0 0 No -27 0.73 Yes 38 69.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 196127604 - NM_015562 UBXN7 1 3.23 6.74 72 11.92 94.56 29 6.74 Yes 16 0.19 No 28 0.79 Yes -28 0.94 Yes 42 96.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 196128633 - NM_015562 UBXN7 1 0.19 0.4 23 6.9 81.26 31 10.63 Yes 18 0.25 No 0 0 No -30 0.89 Yes 40 84.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 196130952 - NM_015562 UBXN7 1 0.07 0.11 7 10.8 87.82 33 6.53 Yes 20 1.17 Yes 0 0 No -32 0.78 Yes 38 72.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 30610554 + NM_005671 UBXN8 1 2.08 0.32 20 -0.15 70.34 33 6 Yes 67 0.33 No 0 0 No -32 0.59 No 37 60.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 30613562 + NM_005671 UBXN8 1 1.64 0.4 23 5.72 88.76 34 4.77 No 12 0.47 No 0 0 No -33 0.58 No 37 79.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 30620793 + NM_005671 UBXN8 1 0.76 0.24 15 -0.13 0 26 4.66 No 65 0.32 No 0 0 No -25 0.97 Yes 45 96.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 41263770 + NM_004181 UCHL1 1 0.03 0.14 9 6.43 83.97 23 5 No 49 1.9 Yes 0 0 No -22 0.82 Yes 48 65.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 41265245 + NM_004181 UCHL1 1 0.1 0.32 16 1.93 0 34 6.89 Yes 3 1.01 Yes 29 0.83 Yes -33 0.82 Yes 37 93.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 76126385 + NM_001270952 UCHL3 1 0.36 0.39 25 8.53 79.12 39 6.91 Yes 26 0.34 No 0 0 No -38 0.62 No 28 68.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 76130509 + NM_001270952 UCHL3 1 0.49 0.61 28 4.41 74.59 26 5.27 No 13 1.08 Yes 0 0 No -25 0.65 No 45 91.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 76164073 + NM_001270952 UCHL3 1 0.63 1 41 5.86 78.56 27 5.31 No 28 0.83 Yes 0 0 No -30 0.86 Yes 40 82.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 192992170 - NR_037607 UCHL5 1 72.51 129.75 72 9.08 81.13 35 4.7 No 71 0.29 No 34 0.52 Yes -31 0.62 No 39 69.51 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 192993026 - NR_037607 UCHL5 1 0.21 0.44 25 6 81.28 26 3.87 No 51 0.38 No 0 0 No -25 0.64 No 45 59.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 192993071 - NR_037607 UCHL5 1 0.04 0.1 7 -2.15 0 9 3.87 No 45 0.53 No 28 0.43 Yes -34 0.53 No 47 49.02 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 192997086 - NR_037607 UCHL5 1 15.71 30.26 72 8 82.99 38 7.42 Yes 25 1.22 Yes 37 0.56 Yes -37 0.6 No 33 53.99 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 192998436 - NR_037607 UCHL5 1 0.05 0.13 7 -0.8 0 27 5.92 Yes 14 0.54 No 0 0 No -26 0.81 Yes 44 70.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 193013460 - NR_037607 UCHL5 1 0.84 2.03 60 3.88 78.2 16 6.2 Yes 3 1.37 Yes 0 0 No -24 0.59 No 46 73.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 193015713 - NR_037607 UCHL5 1 0.22 0.54 22 7.33 90.18 155 9.93 Yes 23 0.91 Yes 0 0 No -23 0.54 No 47 79.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 193018951 - NR_037607 UCHL5 1 0.32 0.64 29 4.86 82.08 16 5.64 Yes 39 0.85 Yes 0 0 No -23 0.9 Yes 47 91.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 134404589 - NR_134666 UCK1 1 1.6 0.86 37 5.92 84.64 23 5.39 No 10 -1.73 No 0 0 No -22 0.72 Yes 48 57.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 134404944 - NR_134666 UCK1 1 2.1 1.18 52 3.05 80.49 20 3.91 No 7 -1.16 No 19 0.37 Yes -19 0.47 No 51 40.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 134404969 - NR_134666 UCK1 1 0.17 0.11 7 -11.57 0 44 7.07 Yes 70 1.31 Yes 19 0.37 Yes -33 0.5 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 165854378 + NM_012474 UCK2 1 1.27 1.65 55 9.22 91.39 45 6.9 Yes 32 1.49 Yes 0 0 No -44 0.95 Yes 26 98.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 165854547 + NM_012474 UCK2 1 0.12 0.18 11 -21.14 0 19 4.36 No 6 1.22 Yes 0 0 No -18 0.84 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 165861409 + NM_012474 UCK2 1 0.07 0.19 10 4.61 81.16 38 5.73 Yes 38 1.34 Yes 0 0 No -23 0.55 No 33 85.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 165865458 + NM_012474 UCK2 1 0.1 0.25 12 8.71 86.19 17 5.2 No 4 0.48 No 0 0 No -24 0.49 No 54 56.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62571608 - NM_001193379 UCKL1 1 0.69 0.21 13 4.66 76.73 37 6.08 Yes 24 0.13 No 0 0 No -36 0.45 No 39 58.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62571860 - NM_001193379 UCKL1 1 0.45 0.31 16 -1.03 0 9 4.58 No 50 -2.75 No 23 0.76 Yes -18 0.56 No 48 32.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 62575375 - NM_001193379 UCKL1 1 0.55 0.21 12 8.69 90.87 20 4.15 No 23 0.31 No 0 0 No -24 0.31 No 46 48.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62577268 - NM_001193379 UCKL1 1 2.48 1.6 51 4.18 78.39 22 5.57 Yes 4 -1.26 No 0 0 No -22 0.48 No 48 28.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62577314 - NM_001193379 UCKL1 1 0.18 0.11 8 -1.58 70.81 10 3.6 No -3 1.2 Yes 0 0 No -32 0.47 No 61 25.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 62577342 - NM_001193379 UCKL1 1 0.35 0.26 16 1.85 0 16 4.47 No 20 -1.2 No 28 0.3 Yes -18 0.59 No 38 44.81 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 62577353 - NM_001193379 UCKL1 1 1.29 0.79 38 7.05 79.89 22 5.29 No 9 -1.45 No 28 0.3 Yes -21 0.84 Yes 49 83.04 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 73686678 - NM_003355 UCP2 1 0.11 0.67 35 5.25 80.89 37 6.89 Yes 54 1.4 Yes 36 0.65 Yes -24 0.46 No 46 58.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 73687571 - NM_003355 UCP2 1 0.08 0.42 22 9.43 94.53 21 6.09 Yes 72 1.73 Yes 0 0 No -28 0.78 Yes 42 81.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 73689164 - NM_003355 UCP2 1 0.07 0.21 14 5.91 79.58 19 5.57 Yes 53 -2.35 No 24 0.55 Yes -25 0.69 Yes 45 52.74 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 73689880 - NM_003355 UCP2 1 0.05 0.18 10 6.92 85.28 24 6.28 Yes 11 0.68 No 23 0.71 Yes -33 0.57 No 44 63.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 73691098 - NM_003355 UCP2 1 0.17 0.69 32 7.1 82.62 44 6.74 Yes 72 1.24 Yes 19 0.57 Yes -19 0.6 No 51 72.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 18556001 - NM_001261385 UEVLD 1 547.75 32.17 72 5.17 79.61 20 4.85 No 38 0.48 No 24 0.83 Yes -24 0.85 Yes 46 79.8 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 18556001 - NM_001261385 UEVLD 1 5.72 0.35 17 5.17 79.61 20 4.85 No 38 0.48 No 24 0.83 Yes -24 0.85 Yes 46 79.8 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 18568572 - NM_001261385 UEVLD 1 1.55 0.94 41 7.67 77.66 32 5.81 Yes 19 0.7 No 0 0 No -31 0.86 Yes 39 92.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 18577495 - NM_001261385 UEVLD 1 0.25 0.15 10 8.89 88.27 29 8.88 Yes 41 1.5 Yes 0 0 No -28 0.93 Yes 42 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 18584585 - NM_001261385 UEVLD 1 0.66 0.4 23 2.08 0 37 5.16 No 24 0.62 No 0 0 No -30 0.86 Yes 40 94.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 18585549 - NM_001261385 UEVLD 1 2.6 1.56 51 13.51 92.63 29 8.09 Yes 16 1.17 Yes 28 0.77 Yes -28 0.43 No 42 86.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 18592286 - NM_001261385 UEVLD 1 1.81 0.97 40 8.64 86.15 38 5.33 No 37 1.75 Yes 37 0.8 Yes -37 0.95 Yes 33 96.41 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 18598046 - NM_001261385 UEVLD 1 0.22 0.13 7 3.46 84.95 27 5.2 No 67 1.56 Yes 0 0 No -26 0.55 No 19 45.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 161127388 + NM_016406 UFC1 1 0.03 0.13 8 7.64 84.92 17 6.31 Yes 4 1.38 Yes 24 0.87 Yes -36 0.71 Yes 34 64.6 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 161127388 + NM_016406 UFC1 1 0.09 0.33 20 7.64 84.92 17 6.31 Yes 4 1.38 Yes 24 0.87 Yes -36 0.71 Yes 34 64.6 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 161128182 + NM_016406 UFC1 1 0.08 0.26 13 0.13 0 20 4.47 No 76 0.31 No 23 0.97 Yes -19 0.95 Yes 51 81.06 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 19442352 - NM_001035247 UFD1L 1 0.08 0.24 12 -4.15 80.05 33 7.57 Yes 20 1.25 Yes 0 0 No -32 0.82 Yes 38 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 19452805 - NM_001035247 UFD1L 1 0.07 0.24 16 -30.19 0 11 3.87 No 48 0.96 Yes 28 0.14 Yes -10 0.63 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr22 19463091 - NM_001035247 UFD1L 1 0.16 0.35 18 5.52 85.33 27 5.5 No 50 1.24 Yes 0 0 No -26 0.54 No 47 52.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 96970738 + NM_015323 UFL1 1 1.19 0.99 48 10.93 91.49 28 7.27 Yes 75 0.59 No 27 0.78 Yes -27 0.59 No 43 43.85 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 97000361 + NM_015323 UFL1 1 0.13 0.14 8 5.2 0 35 7.01 Yes 22 0.76 No 0 0 No -34 0.33 No 36 37.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 38924098 + NM_001286704 UFM1 1 0.06 0.11 7 5.32 77.25 27 4.55 No 1 0.74 No 21 0.92 Yes -26 0.9 Yes 44 91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 38929147 + NM_001286704 UFM1 1 0.07 0.15 10 4.12 71.62 27 6.16 Yes 14 0.89 Yes 0 0 No -26 0.83 Yes 44 87.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 38932230 + NM_001286704 UFM1 1 0.04 0.1 7 -7.75 0 64 6.87 Yes 59 1.14 Yes 0 0 No -31 0.29 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 38933938 + NM_001286704 UFM1 1 0.11 0.25 15 5.88 85.24 29 4.23 No 27 0.97 Yes 0 0 No -32 0.81 Yes 38 79.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 38934177 + NM_001286704 UFM1 1 23.21 51.65 72 8.4 95.78 24 6.04 Yes 70 1.47 Yes 0 0 No -23 0.62 No 46 67.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 186321661 - NR_028085 UFSP2 1 0.27 0.21 14 2.63 72.26 53 6.73 Yes 0 0.22 No 32 0.6 Yes -25 0.55 No 42 53.49 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 186323499 - NR_028085 UFSP2 1 1.01 0.75 34 11.71 89.11 31 5.88 Yes 18 0.71 No 30 0.83 Yes -30 0.83 Yes 40 87.91 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 186327114 - NR_028085 UFSP2 1 0.93 0.75 34 7.51 85.59 36 7.04 Yes 23 2.24 Yes 35 0.81 Yes -29 0.51 No 35 69.59 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 186329233 - NR_028085 UFSP2 1 0.64 0.54 28 -2.05 0 29 5.74 Yes 29 1.12 Yes 27 0.52 Yes -28 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr4 186329545 - NR_028085 UFSP2 1 0.78 0.72 30 4.7 84.33 15 6.18 Yes 69 0.77 No 27 0.29 Yes -23 0.63 No 47 71.1 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr4 186336970 - NR_028085 UFSP2 1 0.17 0.21 14 6.68 75.67 29 6.18 Yes 63 0.9 Yes 0 0 No -28 0.94 Yes 42 92.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 186341083 - NR_028085 UFSP2 1 0.18 0.17 10 5.9 77.93 21 4.76 No 8 0.04 No 0 0 No -20 0.82 Yes 50 83.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 114678038 + NM_003358 UGCG 1 3.7 9.57 70 9.42 85.24 35 8.13 Yes 22 1.78 Yes 24 0.89 Yes -24 0.92 Yes 46 92.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 114679968 + NM_003358 UGCG 1 0.54 1.39 52 8.02 81.02 32 6.86 Yes -3 0.21 No 0 0 No -31 0.78 Yes 39 80.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 114689752 + NM_003358 UGCG 1 0.96 1.89 53 10.98 87.64 41 6.21 Yes 45 0.88 Yes 0 0 No -40 0.95 Yes 30 94.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39500480 - NM_001184701 UGDH 1 0.08 0.14 7 7.72 91.47 17 4.8 No 49 0.75 No 0 0 No -24 0.51 No 49 61.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39503999 - NM_001184701 UGDH 1 0.15 0.21 15 4.31 74.3 37 8.37 Yes 46 1.43 Yes 0 0 No -23 0.46 No 34 83.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 39507682 - NM_001184701 UGDH 1 0.18 0.29 19 -3.91 83.21 22 7.28 Yes 9 1.21 Yes 0 0 No -21 0.9 Yes 49 91.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39507684 - NM_001184701 UGDH 1 0.62 1.07 45 6.53 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.82 Yes 51 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128849926 + NR_027671 UGGT1 1 0.99 0.22 14 7.62 87.01 53 4.68 No 40 0.78 Yes 0 0 No -29 0.71 Yes 41 74.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128850972 + NR_027671 UGGT1 1 3.78 0.67 34 5.75 93.51 20 4.9 No 37 0.42 No 0 0 No -25 0.54 No 45 81.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 128857058 + NR_027671 UGGT1 1 0.12 0.19 14 8.3 77.26 23 6.71 Yes 10 1.85 Yes 0 0 No -22 0.84 Yes 48 91.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128860652 + NR_027671 UGGT1 1 2.48 4.31 70 7.56 78.19 43 6.65 Yes 72 0.58 No 25 0.85 Yes -25 0.94 Yes 45 91.18 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 128865619 + NR_027671 UGGT1 1 0.23 0.36 20 5.89 84.86 31 6.85 Yes 18 0.38 No 0 0 No -31 0.67 Yes 39 69.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 128870177 + NR_027671 UGGT1 1 0.38 0.76 36 0.74 84.41 37 5.49 No 24 0.83 Yes 0 0 No -26 0.58 No 44 71.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128870181 + NR_027671 UGGT1 1 0.53 1.06 45 4.19 0 41 5.77 Yes 28 0.82 Yes 0 0 No -40 0.61 No 40 72.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128870680 + NR_027671 UGGT1 1 0.15 0.31 16 3.82 85.32 32 5.58 Yes 70 1.06 Yes 0 0 No -25 0.77 Yes 45 57.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 128877931 + NR_027671 UGGT1 1 0.09 0.11 7 1.5 83.14 22 5.83 Yes 9 1.3 Yes 0 0 No -21 0.82 Yes 49 74.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128888385 + NR_027671 UGGT1 1 0.1 0.18 11 10.66 87.44 36 5.99 Yes 73 0.6 No 0 0 No -29 0.6 No 32 63.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 128892674 + NR_027671 UGGT1 1 1.32 1.43 50 3.71 80.91 25 6.69 Yes 12 1.47 Yes 0 0 No -24 0.88 Yes 46 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128902090 + NR_027671 UGGT1 1 0.06 0.11 8 5.85 81.53 38 6.13 Yes 25 0.53 No 0 0 No -38 0.54 No 38 41.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 128911398 + NR_027671 UGGT1 1 0.79 0.71 35 3.27 74.74 38 6.17 Yes 25 0.25 No 0 0 No -26 0.62 No 44 60.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 128918113 + NR_027671 UGGT1 1 1.64 1.69 55 7.5 81.26 47 6.75 Yes 4 0.07 No 0 0 No -26 0.86 Yes 44 84.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128927832 + NR_027671 UGGT1 1 0.11 0.19 12 11.13 91.27 41 7.2 Yes 61 0.6 No 25 0.81 Yes -33 0.51 No 37 67.43 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 96506650 - NM_020121 UGGT2 1 2.3 0.25 15 4.79 73.95 26 6.32 Yes 13 0.1 No 0 0 No -25 0.93 Yes 45 94.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 96519459 - NM_020121 UGGT2 1 0.47 0.11 8 3.73 81.48 97 7.92 Yes 47 0.4 No 0 0 No -28 0.74 Yes 43 59.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 96536867 - NM_020121 UGGT2 1 2.27 0.25 16 5.83 80.63 25 4.51 No 9 1.52 Yes 0 0 No -24 0.94 Yes 46 92.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 96537715 - NM_020121 UGGT2 1 1.19 0.11 7 8.97 79.19 44 8.3 Yes 31 1.95 Yes 0 0 No -43 0.77 Yes 27 95.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 96539648 - NM_020121 UGGT2 1 18.91 1.5 50 2.56 79.19 16 8.2 Yes 22 1.53 Yes 34 0.62 Yes -34 0.87 Yes 36 92.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 96577987 - NM_020121 UGGT2 1 0.91 0.13 8 7.22 79.97 20 5.48 No 71 -5.11 No 0 0 No -23 0.83 Yes 47 83.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 96595978 - NM_020121 UGGT2 1 18.93 1.74 59 5.66 78.34 31 5.7 Yes 2 -2.13 No 0 0 No -31 0.79 Yes 39 47.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 96599398 - NM_020121 UGGT2 1 0.96 0.17 10 7.65 84.54 14 5.97 Yes 45 0.96 Yes 0 0 No -57 0.53 No 13 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 96637592 - NM_020121 UGGT2 1 36.94 10.33 71 9.37 91.21 26 5.29 No 73 -2.16 No 25 0.66 Yes -25 0.6 No 45 59.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 96638175 - NM_020121 UGGT2 1 1.29 0.38 25 9.9 90.17 19 6.18 Yes -2 0.35 No 0 0 No -25 0.75 Yes 44 45.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 96641853 - NM_020121 UGGT2 1 0.33 0.19 11 7.93 77.23 30 6.24 Yes 17 0.68 No 29 0.87 Yes -30 0.75 Yes 40 83.72 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 96643728 - NM_020121 UGGT2 1 3.74 1.33 49 6.55 81.63 37 7.16 Yes 71 0.48 No 36 0.58 Yes -36 0.92 Yes 34 92.39 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 96646196 - NM_020121 UGGT2 1 1.41 0.57 31 1.08 65.46 43 6.58 Yes 30 0.2 No 0 0 No -42 0.62 No 28 71.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 96659639 - NM_020121 UGGT2 1 1.81 0.71 37 10.25 91.96 28 5.66 Yes 15 0.04 No 0 0 No -27 0.8 Yes 43 75.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 96683206 - NM_020121 UGGT2 1 0.68 0.35 22 6.53 88.78 28 9.22 Yes 15 1.19 Yes 0 0 No -27 0.9 Yes 43 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64069672 + NM_006759 UGP2 1 8.96 1.31 54 7.48 75.08 37 6.81 Yes 24 1.22 Yes 32 0.79 Yes -36 0.54 No 34 69.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 64083921 + NM_006759 UGP2 1 0.19 0.65 34 7.68 86.7 25 5.99 Yes 38 -2.01 No 24 0.92 Yes -24 0.93 Yes 46 92.59 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 64084097 + NM_006759 UGP2 1 0.22 0.71 36 9.68 84.94 37 6.04 Yes 32 0.58 No 0 0 No -31 0.62 No 40 81.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 64084683 + NM_006759 UGP2 1 1.23 4.08 70 8.61 87.64 22 7.28 Yes 9 1.3 Yes 21 0.88 Yes -21 0.87 Yes 49 88.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 64086313 + NM_006759 UGP2 1 0.11 0.36 21 8.2 87.64 22 7.28 Yes 9 1.28 Yes 0 0 No -21 0.79 Yes 49 89.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64089974 + NM_006759 UGP2 1 0.48 1.51 58 9.32 94.77 20 4.43 No 7 1.1 Yes 19 0.47 Yes -28 0.56 No 42 67.95 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 64110193 + NM_006759 UGP2 1 0.05 0.17 8 8.47 82.89 27 5.74 Yes 14 0.72 No 0 0 No -26 0.8 Yes 44 88.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 64111417 + NM_006759 UGP2 1 0.08 0.25 14 7.91 86.58 26 4.21 No -4 1.24 Yes 0 0 No -26 0.53 No 48 61.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 64112760 + NM_006759 UGP2 1 0.11 0.35 21 4.42 82.2 25 4.97 No 12 0.14 No 0 0 No -24 0.92 Yes 46 96.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 64112904 + NM_006759 UGP2 1 0.06 0.17 11 7.39 71.2 28 5.57 Yes 36 0.64 No 0 0 No -28 0.46 No 51 41.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 69431435 - NM_001077 UGT2B17 1 0.11 0.13 8 -3.61 0 41 5.7 Yes 42 0.23 No 0 0 No -36 0.58 No 30 79.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 162469853 + NM_175866 UHMK1 1 0.14 0.32 19 5.52 87.31 30 6 Yes 48 0.7 No 0 0 No -29 0.92 Yes 41 83.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 162470439 + NM_175866 UHMK1 1 0.11 0.38 22 6.94 90.33 50 7.32 Yes 73 -2.73 No 0 0 No -22 0.77 Yes 48 62.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 162473519 + NM_175866 UHMK1 1 0.03 0.1 7 -1.51 64.62 23 4.13 No 45 -4.1 No 31 0.59 Yes -39 0.24 No 63 32.88 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 162482553 + NM_175866 UHMK1 1 0.05 0.19 11 5.35 83.41 28 4.4 No 4 0.83 Yes 0 0 No -27 0.79 Yes 43 65.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 162487900 + NM_175866 UHMK1 1 0.07 0.22 14 -2.28 0 15 3.83 No 49 0.32 No 0 0 No -33 0.6 No 37 46.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 162491436 + NM_175866 UHMK1 1 0.23 0.75 36 3.17 83.14 25 5.55 No 73 0.83 Yes 0 0 No -24 0.6 No 46 69.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 4919063 + NM_013282 UHRF1 1 0.1 0.13 9 3.28 0 34 7.26 Yes 21 2.61 Yes 0 0 No -33 0.55 No 37 82.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 4940398 + NM_013282 UHRF1 1 0.12 0.14 10 4.74 84.41 29 6.86 Yes 69 1.11 Yes 0 0 No -31 0.74 Yes 39 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4956573 + NM_013282 UHRF1 1 0.24 0.1 7 8.29 90.86 29 6.38 Yes 65 1.23 Yes 0 0 No -28 0.96 Yes 42 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 4956725 + NM_013282 UHRF1 1 0.5 0.21 12 3.07 0 9 3.87 No 12 1.61 Yes 0 0 No -24 0.96 Yes 46 95.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 34785381 + NM_017754 UHRF1BP1 1 0.45 0.21 15 8.74 89.29 30 6.19 Yes 57 1.1 Yes 0 0 No -30 0.65 No 47 45.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 34822461 + NM_017754 UHRF1BP1 1 0.21 0.1 7 4.06 84.24 22 3.87 No 75 -5.54 No 0 0 No -25 0.6 No 45 80.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 34822461 + NM_017754 UHRF1BP1 1 0.85 0.39 22 4.06 84.24 22 3.87 No 75 -5.54 No 0 0 No -25 0.6 No 45 80.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 34835290 + NM_017754 UHRF1BP1 1 0.27 0.13 8 -6.86 75.77 25 4.49 No 31 0.58 No 0 0 No -24 0.68 Yes 46 72.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 100435161 - NM_015054 UHRF1BP1L 1 0.69 0.31 14 7.86 82.5 15 6.24 Yes 73 0.18 No 0 0 No -36 0.45 No 38 36.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 100441876 - NM_015054 UHRF1BP1L 1 0.25 0.13 8 9.02 91.49 20 6.63 Yes 7 0.97 Yes 0 0 No -20 0.85 Yes 50 80.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 100451040 - NM_015054 UHRF1BP1L 1 0.61 0.31 19 8.22 90.21 30 7.24 Yes 17 1.69 Yes 0 0 No -29 0.86 Yes 41 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 100463948 - NM_015054 UHRF1BP1L 1 3.64 2 62 8.31 90.27 16 9.93 Yes 3 0.87 Yes 32 0.76 Yes -32 0.94 Yes 38 88.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 100472153 - NM_015054 UHRF1BP1L 1 0.46 0.35 17 8.19 97.39 21 5.71 Yes 8 0.29 No 0 0 No -20 0.78 Yes 50 85.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 100479117 - NM_015054 UHRF1BP1L 1 0.3 0.15 7 6.02 86.73 28 5.06 No 15 0.76 No 0 0 No -35 0.38 No 35 79.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 100492516 - NM_015054 UHRF1BP1L 1 0.23 0.1 7 8.87 85.4 24 7.42 Yes 11 1.42 Yes 0 0 No -23 0.94 Yes 47 94.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 100493679 - NM_015054 UHRF1BP1L 1 0.44 0.17 11 6.56 89.33 54 7.7 Yes 41 1 Yes 0 0 No -26 0.51 No 17 38.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 100522504 - NM_015054 UHRF1BP1L 1 6.51 2.97 61 9.17 83.46 84 7.19 Yes 71 1.29 Yes 44 0.44 Yes -43 0.53 No 27 75.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 6422630 + NM_152896 UHRF2 1 0.6 0.47 23 -0.4 83 25 5.19 No 12 1.18 Yes 28 0.76 Yes -24 0.86 Yes 46 88.33 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 6422634 + NM_152896 UHRF2 1 5.31 4.38 67 4.49 0 29 5.56 Yes 16 1.16 Yes 28 0.76 Yes -28 0.87 Yes 42 86.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 6428201 + NM_152896 UHRF2 1 0.14 0.13 8 9.12 88.78 25 5.54 No 12 1.27 Yes 0 0 No -27 0.54 No 39 55.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 6437253 + NM_152896 UHRF2 1 0.08 0.1 7 8.82 86.52 39 6.16 Yes 35 0.97 Yes 0 0 No -23 0.44 No 47 74.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 6464552 + NM_152896 UHRF2 1 5.08 3.5 67 10.88 86.39 29 5.74 Yes 16 0.43 No 0 0 No -28 0.89 Yes 42 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 6465743 + NM_152896 UHRF2 1 10.24 6.94 70 8.18 80.52 35 5.91 Yes 22 2.17 Yes 0 0 No -28 0.54 No 36 80.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 6484596 + NM_152896 UHRF2 1 1.26 1.06 46 9.79 88.27 29 6.32 Yes 16 1.35 Yes 28 0.87 Yes -28 0.87 Yes 42 93.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 6484813 + NM_152896 UHRF2 1 0.23 0.21 9 3.97 84.41 38 7.35 Yes 25 1.59 Yes 0 0 No -37 0.94 Yes 33 96.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 6492302 + NM_152896 UHRF2 1 10.77 7.81 72 -0.45 54.16 49 8.48 Yes 36 1.09 Yes 27 0.66 Yes -48 0.63 No 22 63.49 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 6492309 + NM_152896 UHRF2 1 0.33 0.24 12 -6.48 0 13 4 No 43 1.08 Yes 0 0 No -55 0.77 Yes 15 59.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 6496918 + NM_152896 UHRF2 1 0.44 0.26 16 5.52 74.2 25 4.95 No 70 0.04 No 0 0 No -25 0.85 Yes 45 89.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 6496943 + NM_152896 UHRF2 1 1.7 0.94 37 2.36 72.03 28 5.83 Yes 42 -2.18 No 0 0 No -27 0.58 No 43 69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 6496959 + NM_152896 UHRF2 1 3.53 1.92 60 4.9 88.31 12 5 No 58 -2.18 No 0 0 No -43 0.33 No 50 65.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 6496962 + NM_152896 UHRF2 1 1.04 0.53 26 -1.65 73.06 15 5.29 No 61 -2.18 No 0 0 No -23 0.31 No 47 49.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 6498610 + NM_152896 UHRF2 1 0.2 0.17 8 5.75 69.9 28 6.27 Yes 15 2.03 Yes 0 0 No -27 0.7 Yes 33 94.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 6500017 + NM_152896 UHRF2 1 0.51 0.43 21 6.23 90.14 28 4.59 No 3 1.53 Yes 0 0 No -27 0.47 No 17 34.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 6500498 + NM_152896 UHRF2 1 0.94 0.83 34 7.76 82.1 18 5.38 No 5 1.33 Yes 0 0 No -17 0.41 No 48 56.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 176334600 - NM_001199298 UIMC1 1 0.36 0.31 18 2.85 78.25 23 4.69 No 45 -3.82 No 0 0 No -18 0.53 No 52 66.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 176338443 - NM_001199298 UIMC1 1 0.24 0.25 16 7.85 92.66 41 6.33 Yes 28 0.57 No 0 0 No -40 0.67 Yes 30 77.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 176346253 - NM_001199298 UIMC1 1 0.87 0.9 42 6.58 92.61 25 5.48 No 48 -2.6 No 25 0.43 Yes -27 0.6 No 43 72.81 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 176358973 - NM_001199298 UIMC1 1 0.44 0.5 24 9.58 87.01 39 6.71 Yes 26 1.21 Yes 0 0 No -38 0.94 Yes 32 96.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176372140 - NM_001199298 UIMC1 1 0.76 0.75 31 9.01 95.55 23 5.2 No 10 0.89 Yes 0 0 No -22 0.75 Yes 48 87.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176401982 - NM_001199298 UIMC1 1 1.11 1.36 49 5.93 96.76 25 7.94 Yes 12 1.28 Yes 0 0 No -24 0.92 Yes 46 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176407392 - NM_001199298 UIMC1 1 1.44 1.85 55 8.27 71.41 14 6.72 Yes 1 0.57 No 0 0 No -18 0.6 No 32 39.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 132380148 + NM_003565 ULK1 1 0.98 0.17 11 -1.48 70.75 26 5.57 Yes 74 0.08 No 0 0 No -25 0.87 Yes 45 70.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 132391584 + NM_003565 ULK1 1 0.79 0.22 14 4.72 83.78 27 5.41 No 14 0.82 Yes 0 0 No -23 0.65 No 47 57.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 132396557 + NM_003565 ULK1 1 0.78 0.15 10 8.3 78.61 23 7.07 Yes 67 1.75 Yes 0 0 No -22 0.87 Yes 48 93.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 132399645 + NM_003565 ULK1 1 4.49 0.97 37 8.84 87.7 21 5.2 No 25 1.35 Yes 0 0 No -20 0.63 No 50 61.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 19712401 - NM_014683 ULK2 1 3.51 0.14 9 10.56 88.72 24 5.29 No 11 0.91 Yes 0 0 No -23 0.91 Yes 47 94.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 19713043 - NM_014683 ULK2 1 2.97 0.24 12 3.97 84.41 28 7.68 Yes 15 1.62 Yes 0 0 No -27 0.94 Yes 43 95.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 19742341 - NM_014683 ULK2 1 1.73 0.11 7 12.46 95.65 34 6.07 Yes 44 0.72 No 0 0 No -33 0.73 Yes 37 56.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 75130708 - NR_104307 ULK3 1 0.34 0.11 7 -2.88 67.74 12 5.06 No -1 0.6 No 27 0.9 Yes -23 0.65 No 59 32.23 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 75131027 - NR_104307 ULK3 1 2.58 0.94 40 8.36 87.96 28 5.74 Yes 68 0.62 No 0 0 No -27 0.93 Yes 43 87.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 75133847 - NR_104307 ULK3 1 0.72 0.42 22 -1.06 0 37 7.81 Yes 24 1.39 Yes 32 0.86 Yes -36 0.8 Yes 34 86.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 75134460 - NR_104307 ULK3 1 5.92 1.93 58 9.02 82.34 29 6.5 Yes 55 0.85 Yes 28 0.62 Yes -28 0.61 No 42 69.34 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 75134494 - NR_104307 ULK3 1 0.62 0.18 11 0.48 0 20 4.22 No 21 0.83 Yes 28 0.62 Yes -19 0.76 Yes 37 46.69 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 75134759 - NR_104307 ULK3 1 4.02 0.67 31 2 74.94 36 5.89 Yes 45 -0.38 No 27 0.4 Yes -35 0.37 No 49 42.31 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 75135016 - NR_104307 ULK3 1 9.7 1.67 54 -3.05 0 16 4.12 No 14 0.91 Yes 28 0.78 Yes -26 0.79 Yes 44 82.16 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 41978833 - NM_017886 ULK4 1 39.13 3.24 66 7.68 75.71 33 6.15 Yes 20 1.1 Yes 28 0.9 Yes -28 0.68 Yes 42 75.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 7681134 + NM_001302350 UMAD1 1 11.35 2.35 61 5.65 78.19 35 4.89 No 22 1.23 Yes 28 0.91 Yes -28 0.77 Yes 42 74.85 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 7712946 + NM_001302350 UMAD1 1 1.1 0.17 10 -6.2 0 10 3.92 No 68 1.35 Yes 0 0 No -32 0.85 Yes 38 83.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 7861268 + NM_001302350 UMAD1 1 0.42 0.14 9 8.03 83.92 32 5.56 Yes 43 0.93 Yes 0 0 No -31 0.63 No 39 53.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 7863431 + NM_001302350 UMAD1 1 1.63 0.57 30 11.85 84.52 27 6.48 Yes 14 1.74 Yes 0 0 No -26 0.86 Yes 44 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 7907960 + NM_001302350 UMAD1 1 1.27 0.43 23 6.71 69.48 42 6.86 Yes 60 1.23 Yes 0 0 No -41 0.8 Yes 29 84.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 124458873 + NR_033437 UMPS 1 0.14 0.24 15 -7.12 82.68 41 5.97 Yes 73 -2.29 No 0 0 No -34 0.57 No 39 64.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 124466556 + NR_033437 UMPS 1 0.07 0.13 7 4.45 82.33 22 5.74 Yes 31 -3.92 No 0 0 No -26 0.48 No 45 63.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 26874424 - NM_001330166 UNC119 1 1.06 1.44 45 -0.76 0 39 7.25 Yes 26 2.1 Yes 0 0 No -38 0.65 No 32 73.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 26875028 - NM_001330166 UNC119 1 0.17 0.25 13 2.82 0 28 6.24 Yes 15 1.11 Yes 0 0 No -27 0.84 Yes 43 87.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 26875136 - NM_001330166 UNC119 1 0.1 0.13 9 -4.69 0 9 3.83 No -4 0.66 No 24 0.94 Yes -8 0.5 No 62 32.12 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 121149392 + NM_001080533 UNC119B 1 3.82 2.03 58 12.37 97.44 39 6.69 Yes 26 1.97 Yes 33 0.85 Yes -38 0.61 No 32 67.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 73826560 - NM_199242 UNC13D 1 0.15 0.11 8 1.49 0 30 7.98 Yes 17 2.49 Yes 29 0.72 Yes -29 0.76 Yes 41 88.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73827343 - NM_199242 UNC13D 1 0.16 0.14 8 7.74 84.5 19 5.48 No 68 2.13 Yes 0 0 No -18 0.85 Yes 52 83.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73827499 - NM_199242 UNC13D 1 0.79 0.9 38 2.09 73.94 20 3.98 No 7 0.99 Yes 0 0 No -19 0.84 Yes 51 74.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73831568 - NM_199242 UNC13D 1 0.23 0.19 12 4.46 74.16 21 6.63 Yes 8 0.22 No 0 0 No -20 0.53 No 47 66.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 73832675 - NM_199242 UNC13D 1 0.54 0.33 18 5.88 75.84 50 7.07 Yes 55 1.98 Yes 26 0.59 Yes -49 0.91 Yes 21 94.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73832716 - NM_199242 UNC13D 1 0.38 0.25 17 -1.2 75.91 27 6.71 Yes 14 1.95 Yes 26 0.59 Yes -26 0.75 Yes 44 89.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73832775 - NM_199242 UNC13D 1 4.38 2.72 65 4.28 85.3 25 5.48 No 12 1.19 Yes 0 0 No -24 0.7 Yes 46 65.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 73832796 - NM_199242 UNC13D 1 0.22 0.11 7 -3.33 0 13 4.36 No 47 -2.83 No 21 0.82 Yes -23 0.58 No 58 26.61 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 73832806 - NM_199242 UNC13D 1 0.51 0.29 15 -11.18 0 17 3.55 No 76 -5.33 No 21 0.82 Yes -13 0.71 Yes 60 25.79 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 73832996 - NM_199242 UNC13D 1 0.46 0.4 22 1.39 0 26 5.66 Yes 13 0.4 No 0 0 No -25 0.79 Yes 40 63.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 73835952 - NM_199242 UNC13D 1 0.48 0.32 18 4.28 72.83 43 6.48 Yes 30 1.06 Yes 0 0 No -29 0.88 Yes 43 75.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73836132 - NM_199242 UNC13D 1 0.15 0.14 10 7.18 82.2 31 4.82 No 66 -2.3 No 0 0 No -24 0.88 Yes 46 91.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73836206 - NM_199242 UNC13D 1 0.66 0.57 28 6.53 86.33 20 5.09 No 7 0.14 No 18 0.96 Yes -19 0.85 Yes 51 82.19 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 73836449 - NM_199242 UNC13D 1 1.58 1.29 49 -5.08 69.55 48 7.35 Yes 35 0.84 Yes 35 0.37 Yes -47 0.45 No 23 77.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 73836647 - NM_199242 UNC13D 1 0.2 0.21 11 -4.87 0 18 4.47 No 50 1.59 Yes 0 0 No -17 0.84 Yes 53 80.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73839330 - NM_199242 UNC13D 1 0.27 0.22 12 -3.84 75.91 21 5.2 No 22 1.44 Yes 20 0.92 Yes -20 0.88 Yes 50 78.45 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73839367 - NM_199242 UNC13D 1 0.13 0.13 8 1.79 65.84 26 5.66 Yes 71 0.89 Yes 22 0.74 Yes -25 0.48 No 45 37.15 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 73840030 - NM_199242 UNC13D 1 2.21 1.25 45 7.25 83 23 7.36 Yes 10 2.43 Yes 0 0 No -22 0.86 Yes 48 85.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91479154 + NM_001323620 UNC45A 1 0.21 0.19 13 2.04 84.74 14 5 No 1 0.95 Yes 23 0.86 Yes -24 0.28 No 48 35.75 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 91480116 + NM_001323620 UNC45A 1 0.18 0.18 11 7.06 86.75 27 5.48 No 70 0.69 No 0 0 No -19 0.59 No 51 57.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 91489913 + NM_001323620 UNC45A 1 1.55 1.04 42 10.99 89.13 28 5.3 No 74 0.96 Yes 0 0 No -21 0.65 No 49 62.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91489994 + NM_001323620 UNC45A 1 0.76 0.5 22 7.22 79.71 25 5.82 Yes 12 0.75 No 24 0.78 Yes -24 0.82 Yes 46 65.26 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 99226105 + NM_014044 UNC50 1 11.9 8.6 72 7.94 83.56 36 6.93 Yes 23 1.89 Yes 35 0.87 Yes -35 0.79 Yes 35 91.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 99226222 + NM_014044 UNC50 1 1.41 1.11 49 0.61 0 30 5.83 Yes 17 0.19 No 0 0 No -30 0.59 No 41 45.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 99226623 + NM_014044 UNC50 1 0.13 0.15 11 4.49 79.1 21 6.61 Yes 74 1.37 Yes 0 0 No -25 0.44 No 40 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 99226670 + NM_014044 UNC50 1 0.37 0.44 23 7.4 94.89 24 4.11 No 42 -2.56 No 0 0 No -24 0.34 No 54 32.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 99228893 + NM_014044 UNC50 1 7.46 12.01 72 3.73 84.41 30 5.57 Yes 17 1.7 Yes 0 0 No -24 0.69 Yes 46 74.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 99234608 + NM_014044 UNC50 1 1.21 1.61 51 7.18 86.22 28 4.36 No 46 0.52 No 27 0.76 Yes -27 0.34 No 40 54.95 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 67764113 - NM_030930 UNC93B1 1 0.23 0.21 13 10.2 91.55 41 7.52 Yes 28 0.97 Yes 0 0 No -25 0.52 No 45 66.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 67766846 - NM_030930 UNC93B1 1 0.65 0.76 34 5.08 73.98 34 6.26 Yes 21 0.66 No 24 0.61 Yes -24 0.53 No 37 77.41 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 67770635 - NM_030930 UNC93B1 1 0.32 0.35 21 4.94 0 14 4.47 No NA NA NA 0 0 No -36 0.82 Yes 34 91.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 109537012 + NM_003362 UNG 1 0.17 0.19 11 3.54 77.46 17 5.27 No 4 0.98 Yes 0 0 No -16 0.32 No 49 50.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 109545030 + NM_003362 UNG 1 0.68 0.96 37 9.86 89.88 35 4.86 No 15 0.95 Yes 0 0 No -24 0.53 No 46 67.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 109547636 + NM_003362 UNG 1 0.08 0.13 8 1.88 77.23 22 6.93 Yes 2 0.69 No 25 0.4 Yes -30 0.6 No 49 62.65 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 73787840 + NM_001080419 UNK 1 90.51 21.49 72 6.76 87.1 29 5.14 No 58 0.51 No 22 0.6 Yes -29 0.6 No 41 72.28 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 73787919 + NM_001080419 UNK 1 0.47 0.11 7 3.19 68.62 65 6.87 Yes 15 0.85 Yes 0 0 No -27 0.88 Yes 43 79.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73788393 + NM_001080419 UNK 1 3 0.72 36 6.95 93.25 42 5.34 No 25 0.84 Yes 37 0.63 Yes -37 0.79 Yes 33 80.43 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 73793361 + NM_001080419 UNK 1 0.37 0.1 7 7.54 88.21 15 4.73 No 2 0.82 Yes 0 0 No -26 0.4 No 44 56.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 73805028 + NM_001080419 UNK 1 9.58 2.42 62 7.17 85.27 11 5.66 Yes 71 -1.31 No 25 0.36 Yes -25 0.58 No 45 74.96 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 73810903 + NM_001080419 UNK 1 0.55 0.21 13 1.94 81.91 20 4.9 No 7 0.18 No 0 0 No -19 0.88 Yes 51 85.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 73814778 + NM_001080419 UNK 1 0.45 0.18 11 3.63 0 21 4.58 No 8 1.93 Yes 0 0 No -20 0.94 Yes 50 94.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73818641 + NM_001080419 UNK 1 0.82 0.39 22 11.26 90.88 30 4.97 No 58 -0.86 No 22 0.3 Yes -18 0.59 No 32 59.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 1417814 - NM_001193388 UNKL 1 3.78 0.56 29 6.78 89.13 33 5.74 Yes 54 0.27 No 0 0 No -23 0.81 Yes 47 58.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 1418116 - NM_001193388 UNKL 1 4.33 0.86 43 7.91 80.53 17 5.49 No 4 0.53 No 0 0 No -22 0.65 No 48 62.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1419990 - NM_001193388 UNKL 1 1.82 0.24 15 6.57 87.89 57 6.65 Yes 44 1.04 Yes 0 0 No -25 0.54 No 45 44.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 1420447 - NM_001193388 UNKL 1 0.54 0.19 14 5.74 80.96 41 6.84 Yes NA NA NA 0 0 No -38 0.45 No 32 60.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 1464011 - NM_001193388 UNKL 1 4.99 0.22 12 7.95 84.34 17 5.2 No 18 -1.03 No 23 0.85 Yes -23 0.66 Yes 50 54.56 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 18961858 + NM_002911 UPF1 1 0.26 0.39 22 7.36 88.07 33 5.75 Yes 1 1.08 Yes 27 0.85 Yes -27 0.7 Yes 38 67.78 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 18965385 + NM_002911 UPF1 1 0.94 1.06 47 -7.37 0 20 5.1 No 54 -4.52 No 30 0.74 Yes -19 0.72 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 18976857 + NM_002911 UPF1 1 0.21 0.24 14 3.46 0 20 7.48 Yes 7 2.16 Yes 0 0 No -27 0.94 Yes 43 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11963271 - NM_015542 UPF2 1 0.1 0.13 8 6.37 80.3 28 5.2 No 43 1.54 Yes 0 0 No -23 0.67 Yes 47 74.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 11983560 - NM_015542 UPF2 1 0.12 0.15 11 7.59 89.4 26 5.04 No 73 -4.55 No 0 0 No -25 0.57 No 45 63.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 11993221 - NM_015542 UPF2 1 0.7 1.04 45 2.26 71.27 21 7.49 Yes 57 -2.8 No 0 0 No -20 0.5 No 46 31.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 12002566 - NM_015542 UPF2 1 0.07 0.1 7 8.87 87.74 46 8.63 Yes 33 1.39 Yes 0 0 No -33 0.5 No 32 60.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12006149 - NM_015542 UPF2 1 0.34 0.58 31 1.36 0 18 4.58 No 26 0.5 No 26 0.45 Yes -17 0.38 No 22 41.32 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 12006171 - NM_015542 UPF2 1 0.3 0.47 27 8.19 87.28 17 4.48 No 55 1.52 Yes 0 0 No -26 0.6 No 48 53.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12006836 - NM_015542 UPF2 1 0.08 0.15 8 4.99 78.28 38 6.37 Yes 35 0.51 No 0 0 No -37 0.54 No 33 64.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 12038079 - NM_015542 UPF2 1 0.46 0.54 30 4.39 85.48 25 5.07 No 21 0.3 No 0 0 No -24 0.79 Yes 46 73.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 12043823 - NM_015542 UPF2 1 0.07 0.13 8 -4.29 79.3 34 5.83 Yes 58 0.68 No 0 0 No -28 0.81 Yes 42 89.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 12049097 - NM_015542 UPF2 1 0.65 1.22 43 -2.41 0 16 4.24 No 29 0.82 Yes 0 0 No -20 0.46 No 50 60.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12049106 - NM_015542 UPF2 1 0.09 0.15 9 3.21 68.8 33 6.18 Yes 20 0.81 Yes 0 0 No -22 0.8 Yes 38 57.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 12050626 - NM_015542 UPF2 1 0.06 0.11 7 6.4 88.76 34 6.74 Yes 21 1.07 Yes 0 0 No -33 0.61 No 38 57.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 12071522 - NM_015542 UPF2 1 0.1 0.17 11 -6.21 78.77 23 5.73 Yes 73 0.28 No 0 0 No -22 0.68 Yes 44 61.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 12071954 - NM_015542 UPF2 1 0.1 0.14 8 3.07 84.41 43 6.52 Yes 30 0.95 Yes 0 0 No -32 0.74 Yes 38 72.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12074290 - NM_015542 UPF2 1 0.41 0.63 32 3.01 0 54 8.22 Yes 41 0.79 Yes 0 0 No -43 0.68 Yes 27 70.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 12079022 - NM_015542 UPF2 1 0.13 0.14 9 3.31 88.27 34 4.94 No 21 0.89 Yes 0 0 No -33 0.69 Yes 37 60.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 115049261 + NM_023011 UPF3A 1 0.86 0.26 16 9.87 93.68 28 6.93 Yes 15 0.83 Yes 0 0 No -27 0.93 Yes 43 93.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 115049568 + NM_023011 UPF3A 1 3.56 1.19 49 -0.56 62.77 49 6.26 Yes 71 2.18 Yes 0 0 No -48 0.85 Yes 22 95.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 115051733 + NM_023011 UPF3A 1 3.69 1.32 48 -0.27 53.52 33 5.78 Yes 54 0.9 Yes 23 0.69 Yes -32 0.58 No 37 60.89 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 115052213 + NM_023011 UPF3A 1 1.45 0.76 33 3.24 78.68 22 4.81 No 66 -1.31 No 0 0 No -21 0.72 Yes 49 53.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 115052787 + NM_023011 UPF3A 1 5.75 2.9 66 8.05 88.92 23 6.48 Yes 3 1.21 Yes 0 0 No -22 0.87 Yes 48 91.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 115057075 + NM_023011 UPF3A 1 4.64 1.65 53 8.69 90.68 37 7.68 Yes 24 1.13 Yes 40 0.63 Yes -36 0.63 No 34 77.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr13 115057079 + NM_023011 UPF3A 1 0.89 0.35 16 2.91 0 41 7.92 Yes 28 1.14 Yes 40 0.63 Yes -40 0.63 No 30 79.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr13 115057110 + NM_023011 UPF3A 1 0.43 0.15 11 1.86 76.54 29 6.32 Yes 59 1.12 Yes 0 0 No -24 0.69 Yes 46 61.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 118982242 - NM_023010 UPF3B 1 0.15 0.15 10 4.74 84.41 31 6.75 Yes 18 0.93 Yes 0 0 No -30 0.96 Yes 40 95.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 118986643 - NM_023010 UPF3B 1 0.11 0.11 8 12.39 94.07 18 6.78 Yes NA NA NA 0 0 No -27 0.74 Yes 43 39.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 33891867 - NM_018244 UQCC1 1 0.18 0.25 14 -2.71 0 10 3.87 No 57 2.75 Yes 0 0 No -56 0.93 Yes 14 89.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33894611 - NM_018244 UQCC1 1 0.13 0.18 11 5.59 82.19 45 6.99 Yes 32 0.49 No 30 0.72 Yes -44 0.86 Yes 26 81.29 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 33929398 - NM_018244 UQCC1 1 0.19 0.21 11 9.67 88.47 52 4.7 No 0 1.53 Yes 0 0 No -22 0.9 Yes 48 81.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33934227 - NM_018244 UQCC1 1 0.99 1.08 44 6.23 91.05 20 4.79 No 64 -4.33 No 18 0.13 Yes -33 0.33 No 37 53.71 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 33934551 - NM_018244 UQCC1 1 0.89 0.99 45 6.44 86.54 38 6.24 Yes 52 0.28 No 22 0.51 Yes -37 0.9 Yes 33 94.23 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 33934593 - NM_018244 UQCC1 1 0.14 0.17 8 2.53 67.09 23 5 No 10 0.32 No 22 0.51 Yes -22 0.76 Yes 48 68.46 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 33937789 - NM_018244 UQCC1 1 0.14 0.19 12 2.08 0 48 10.72 Yes 35 2.45 Yes 0 0 No -47 0.83 Yes 23 95.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33950081 - NM_018244 UQCC1 1 0.07 0.1 7 7.75 84.23 27 4.98 No 29 0.92 Yes 0 0 No -23 0.74 Yes 47 83.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33950830 - NM_018244 UQCC1 1 0.67 0.96 37 11.23 85.86 48 7.27 Yes 35 2.37 Yes 0 0 No -47 0.8 Yes 23 81.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33958766 - NM_018244 UQCC1 1 0.16 0.26 15 9.71 95.02 33 5.13 No 20 0.78 Yes 0 0 No -23 0.79 Yes 47 75.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33962057 - NM_018244 UQCC1 1 0.37 0.65 31 3.82 79.85 30 5.93 Yes 61 1.53 Yes 0 0 No -29 0.9 Yes 41 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33963749 - NM_018244 UQCC1 1 0.13 0.22 14 12.03 92.63 33 7.37 Yes 57 0.84 Yes 0 0 No -32 0.92 Yes 38 92.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33974193 - NM_018244 UQCC1 1 0.08 0.13 9 8.17 89.58 26 4.96 No 70 1.56 Yes 29 0.31 Yes -29 0.55 No 41 49.96 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 33980081 - NM_018244 UQCC1 1 1.28 1.97 62 0.75 82.91 26 5.2 No 17 0.82 Yes 25 0.96 Yes -25 0.94 Yes 45 97.54 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 33981008 - NM_018244 UQCC1 1 0.11 0.17 9 5.79 76.38 47 6.76 Yes 45 1.02 Yes 0 0 No -29 0.8 Yes 41 92.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 33981998 - NM_018244 UQCC1 1 0.12 0.15 8 2.05 87.64 28 5.65 Yes 15 1.65 Yes 22 0.53 Yes -27 0.86 Yes 43 95.58 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 33984381 - NM_018244 UQCC1 1 0.07 0.1 7 3.25 70.61 45 6.89 Yes 53 0.58 No 0 0 No -35 0.65 No 35 83.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 33995819 - NM_018244 UQCC1 1 0.27 0.25 14 2.78 0 42 5.3 No 12 0.77 No 0 0 No -24 0.92 Yes 46 93.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 33997271 - NM_018244 UQCC1 1 0.2 0.24 16 1.89 83.13 31 5.45 No 10 0.74 No 30 0.86 Yes -30 0.86 Yes 40 89.42 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 33997941 - NM_018244 UQCC1 1 0.51 0.61 33 10.45 88.85 19 5.92 Yes 47 1.14 Yes 0 0 No -33 0.44 No 52 55.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 33997970 - NM_018244 UQCC1 1 0.22 0.26 16 1.14 72.84 26 6.2 Yes 71 1.28 Yes 30 0.51 Yes -30 0.64 No 40 87.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 33668277 - NM_032340 UQCC2 1 0.04 0.13 8 3.51 80.94 20 4.8 No 44 2.07 Yes 0 0 No -19 0.61 No 51 68.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 33678629 - NM_032340 UQCC2 1 1.19 2.49 65 11.87 95.47 33 5.7 Yes 35 0.26 No 0 0 No -32 0.61 No 44 61.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 62439499 + NM_001085372 UQCC3 1 0.43 0.28 16 4.43 84.56 27 3.9 No 65 -3.72 No 0 0 No -26 0.69 Yes 47 63.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 30165669 + NM_001003684 UQCR10 1 0.46 0.51 28 -4.16 55.38 35 6.22 Yes 70 -4.97 No 0 0 No -34 0.75 Yes 36 56.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1598326 - NM_006830 UQCR11 1 0.01 0.1 7 6.21 82.31 31 5.71 Yes 57 1.36 Yes 30 0.84 Yes -30 0.89 Yes 40 95.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 1598537 - NM_006830 UQCR11 1 0.04 0.31 21 3.01 0 26 6.08 Yes 13 1.27 Yes 0 0 No -25 0.75 Yes 45 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1600098 - NM_006830 UQCR11 1 0.04 0.25 12 4.66 71.82 23 5.39 No 62 -4.03 No 0 0 No -20 0.52 No 50 51.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1602152 - NM_006830 UQCR11 1 0.06 0.33 16 3.4 0 31 6.48 Yes 18 0.31 No 25 0.51 Yes -30 0.71 Yes 41 70.13 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 1602426 - NM_006830 UQCR11 1 0.2 1.21 49 1.98 73.89 34 4.66 No 51 0.43 No 26 0.25 Yes -30 0.28 No 43 22.88 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 97243744 - NM_006294 UQCRB 1 0.74 17.6 72 7.71 91.47 25 5 No 61 0.5 No 24 0.9 Yes -24 0.9 Yes 46 86.26 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 97243847 - NM_006294 UQCRB 1 0.01 0.33 22 1.79 76.23 31 5.29 No 15 0.01 No 0 0 No -30 0.71 Yes 40 82.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 97243850 - NM_006294 UQCRB 1 0.39 9.21 72 6.99 84.41 28 5.04 No 12 0.03 No 27 0.86 Yes -27 0.74 Yes 43 85.91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 97245450 - NM_006294 UQCRB 1 0.1 1.15 42 -0.83 0 12 3.7 No 71 0.17 No 19 0.89 Yes -25 0.84 Yes 45 83.31 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 97245455 - NM_006294 UQCRB 1 0.03 0.28 17 -17.88 0 21 4.99 No 66 0.17 No 19 0.89 Yes -20 0.84 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 97245471 - NM_006294 UQCRB 1 0.01 0.11 7 -2.16 0 19 4.34 No 50 0.17 No 19 0.89 Yes -18 0.5 No 38 28.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 97246460 - NM_006294 UQCRB 1 0.01 0.15 8 6.33 82.57 17 5.4 No 4 1.55 Yes 0 0 No -20 0.91 Yes 50 79.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 48638223 - NM_003365 UQCRC1 1 0.03 0.13 7 -6.87 0 15 4.24 No 59 2.17 Yes 0 0 No -28 0.22 No 56 35.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 48638232 - NM_003365 UQCRC1 1 0.06 0.28 14 -0.92 59.93 20 5.1 No 50 2.18 Yes 0 0 No -19 0.43 No 22 54.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 48638249 - NM_003365 UQCRC1 1 0.1 0.44 25 3.13 82.34 12 4.55 No 33 2.19 Yes 0 0 No -45 0.74 Yes 25 45.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 48638573 - NM_003365 UQCRC1 1 0.04 0.18 13 2.88 79.25 26 5 No 56 0.96 Yes 23 0.91 Yes -50 0.42 No 23 69.85 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 48638904 - NM_003365 UQCRC1 1 1.65 7.26 72 4.9 79.66 20 5.48 No 7 1.36 Yes 26 0.7 Yes -19 0.64 No 51 75.21 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 21967751 + NM_003366 UQCRC2 1 0.04 0.21 13 0.4 74.23 14 5.29 No 53 0.27 No 0 0 No -21 0.76 Yes 49 70.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 21968557 + NM_003366 UQCRC2 1 0.19 1.07 44 0.34 83.57 24 6.55 Yes 11 1.78 Yes 0 0 No -23 0.79 Yes 47 80.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 21968574 + NM_003366 UQCRC2 1 0.05 0.25 14 3.27 76.36 22 5.1 No 28 1.78 Yes 0 0 No -40 0.32 No 30 62.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 21970659 + NM_003366 UQCRC2 1 2.21 12.36 72 7.15 80.48 26 6.31 Yes 13 0.83 Yes 25 0.78 Yes -26 0.43 No 45 47.16 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 21972648 + NM_003366 UQCRC2 1 0.11 0.61 33 6.41 80.63 16 4.68 No 3 0.85 Yes 20 0.46 Yes -20 0.65 No 50 67.36 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 21974119 + NM_003366 UQCRC2 1 0.16 1.24 47 5.28 73.9 29 5.57 Yes 16 1.27 Yes 0 0 No -28 0.87 Yes 42 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 21978442 + NM_003366 UQCRC2 1 0.67 3.56 65 10.32 70.85 27 5.56 Yes 14 0.33 No 0 0 No -26 0.83 Yes 44 89.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 21981210 + NM_003366 UQCRC2 1 0.02 0.11 8 7.08 85.05 32 9.11 Yes 19 2.03 Yes 0 0 No -31 0.93 Yes 39 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 21982847 + NM_003366 UQCRC2 1 0.03 0.17 11 -22.26 0 31 6.08 Yes 29 0.73 No 0 0 No -30 0.81 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 21987741 + NM_003366 UQCRC2 1 0.01 0.1 7 2.6 76.84 29 4.55 No 1 0.15 No 0 0 No -20 0.41 No 42 58.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 21989776 + NM_003366 UQCRC2 1 0.03 0.19 12 3.32 82 25 6.32 Yes 70 0.84 Yes 0 0 No -24 0.53 No 46 69.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 21990161 + NM_003366 UQCRC2 1 0.05 0.31 17 1.53 71.93 26 6.9 Yes 13 0.29 No 0 0 No -26 0.83 Yes 44 90.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 21990203 + NM_003366 UQCRC2 1 0.39 2.54 66 1.33 61.99 30 6.98 Yes 17 0.9 Yes 0 0 No -29 0.77 Yes 41 71.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 21990300 + NM_003366 UQCRC2 1 0.03 0.21 12 4.9 72.57 32 6.15 Yes 49 -4.24 No 0 0 No -31 0.57 No 39 38.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 21990386 + NM_003366 UQCRC2 1 0.02 0.11 8 0.4 72.06 21 5.83 Yes 8 0.77 Yes 0 0 No -28 0.59 No 50 44.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 29702349 - NM_006003 UQCRFS1 1 0.02 0.1 7 3.88 81.03 20 5 No 42 0.14 No 0 0 No -19 0.64 No 51 41.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 46772817 + NM_001297565 UQCRH 1 0.02 0.19 13 11.19 89.16 22 6.78 Yes 74 -0.79 No 0 0 No -22 0.82 Yes 48 85.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 46774775 + NM_001297565 UQCRH 1 0.02 0.22 15 -7.04 81.86 30 7.82 Yes 17 1.63 Yes 0 0 No -29 0.47 No 41 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 46775572 + NM_001297565 UQCRH 1 0.25 0.22 11 3.68 0 22 6.24 Yes 9 0.34 No 26 0.77 Yes -21 0.79 Yes 49 86.07 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 46775641 + NM_001297565 UQCRH 1 0.25 0.22 13 4.12 72.46 22 6.08 Yes 9 0.42 No 0 0 No -21 0.69 Yes 49 62.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 132203181 + NM_014402 UQCRQ 1 0.14 1.65 57 -13.17 67.82 69 8.66 Yes 56 1.14 Yes 0 0 No -40 0.83 Yes 30 90.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 132203188 + NM_014402 UQCRQ 1 0.45 5.39 70 -8.8 0 13 3.97 No 63 1.13 Yes 0 0 No -47 0.88 Yes 23 89.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 132203221 + NM_014402 UQCRQ 1 0.06 0.72 34 -5.98 54.92 28 5.68 Yes 49 0.41 No 0 0 No -35 0.58 No 35 72.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 33694960 - NM_014825 URB1 1 1.4 0.94 37 2.08 73.45 25 5 No 12 0.89 Yes 0 0 No -24 0.92 Yes 46 88.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33695037 - NM_014825 URB1 1 0.97 0.65 33 5.04 79.66 30 6.39 Yes 17 1.41 Yes 0 0 No -29 0.86 Yes 41 93.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33709840 - NM_014825 URB1 1 0.58 0.43 22 7.73 82.4 34 5.76 Yes 21 0.38 No 18 0.43 Yes -33 0.94 Yes 37 94.22 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr21 33711158 - NM_014825 URB1 1 0.2 0.22 15 4.78 76.28 25 5.44 No 55 1.26 Yes 0 0 No -25 0.69 Yes 45 47.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 33721740 - NM_014825 URB1 1 0.15 0.11 8 7.38 84.47 24 4.03 No 65 1.01 Yes 0 0 No -22 0.83 Yes 48 92.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33721984 - NM_014825 URB1 1 0.2 0.14 9 3.56 78.57 26 5.28 No 69 0.66 No 0 0 No -25 0.8 Yes 45 79.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 33727267 - NM_014825 URB1 1 0.43 0.46 25 3.96 81.88 49 6.66 Yes 67 1.06 Yes 0 0 No -31 0.9 Yes 39 81.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33733424 - NM_014825 URB1 1 0.16 0.14 9 -2.43 0 13 4.24 No NA NA NA 0 0 No -40 0.07 No 12 9.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 33735582 - NM_014825 URB1 1 1.34 1.14 44 6.34 78.55 26 6.01 Yes 62 1.16 Yes 0 0 No -25 0.95 Yes 45 93.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33739474 - NM_014825 URB1 1 0.13 0.15 10 3.54 71.29 26 5.76 Yes 44 0.86 Yes 0 0 No -32 0.8 Yes 38 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 33746078 - NM_014825 URB1 1 0.18 0.21 12 0.34 0 42 7.31 Yes 14 0.71 No 0 0 No -29 0.49 No 41 69.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 33753589 - NM_014825 URB1 1 0.26 0.28 15 9.53 78.63 27 5.36 No 69 0.12 No 0 0 No -23 0.47 No 44 63.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 229767993 + NM_001314021 URB2 1 0.19 0.13 8 4.41 80.73 14 5.22 No 22 1.74 Yes 24 0.81 Yes -21 0.88 Yes 49 87.17 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 30462080 + NM_003796 URI1 1 0.5 0.18 10 3.94 76.87 9 5.38 No 30 1.24 Yes 27 0.77 Yes -22 0.51 No 46 70.02 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 30471065 + NM_003796 URI1 1 0.73 0.56 29 7.41 84.68 27 7.08 Yes 60 1.02 Yes 27 0.75 Yes -27 0.81 Yes 43 70.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 30505087 + NM_003796 URI1 1 0.1 0.15 10 8.16 84.12 27 4.87 No 74 1.49 Yes 26 0.73 Yes -26 0.81 Yes 44 91.22 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 30506442 + NM_003796 URI1 1 12.07 17.6 72 8.55 87.92 23 5.24 No 44 0.55 No 23 0.68 Yes -23 0.45 No 47 56.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 131134721 + NR_049743 URM1 1 2.35 0.24 14 4.36 67.08 46 8.11 Yes 33 1.03 Yes 0 0 No -45 0.63 No 25 95.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 131140314 + NR_049743 URM1 1 2013.99 155.58 72 10.24 87.53 36 6.86 Yes 23 1.52 Yes 35 0.83 Yes -35 0.97 Yes 35 96.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 131149620 + NR_049743 URM1 1 0.05 0.14 8 5.89 76.37 28 5.64 Yes 62 1.02 Yes 0 0 No -27 0.8 Yes 43 82.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131149861 + NR_049743 URM1 1 0.21 0.54 28 9.33 91.62 23 5.83 Yes 67 1.21 Yes 0 0 No -29 0.64 No 43 80.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 131150068 + NR_049743 URM1 1 0.05 0.13 8 -0.05 64.93 17 5.48 No 60 0.81 Yes 31 0.66 Yes -16 0.28 No 54 54.73 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 45478578 + NR_036510 UROD 1 2178.75 131.06 72 4.33 73.15 32 6.86 Yes 19 2.02 Yes 31 0.96 Yes -31 0.86 Yes 39 90.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 45478939 + NR_036510 UROD 1 0.08 0.17 10 0.85 0 15 4.58 No 2 0.35 No 23 0.73 Yes -22 0.83 Yes 48 70.12 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 45479246 + NR_036510 UROD 1 1.89 2.76 67 1.77 76.47 41 6.63 Yes 28 0.65 No 40 0.3 Yes -40 0.46 No 30 68.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 127483538 - NR_136677 UROS 1 0.05 0.11 8 -4.48 0 15 4.36 No 21 1.62 Yes 0 0 No -33 0.86 Yes 37 91.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 127483728 - NR_136677 UROS 1 0.33 0.76 32 8.53 83.39 25 5.1 No 12 1.28 Yes 0 0 No -24 0.91 Yes 46 94.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 127485431 - NR_136677 UROS 1 1.82 2.86 65 8.28 92.76 26 5.29 No 31 1.08 Yes 0 0 No -25 0.79 Yes 45 90.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 127486211 - NR_136677 UROS 1 0.23 0.38 22 6.46 81.84 26 4.88 No 44 -1.1 No 0 0 No -23 0.75 Yes 47 61.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 127486260 - NR_136677 UROS 1 0.13 0.21 14 3.98 68.65 13 4.71 No 57 -4.07 No 0 0 No -23 0.81 Yes 47 58.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 127491594 - NR_136677 UROS 1 2.01 4.79 68 10.15 93.36 17 6.24 Yes 4 1.06 Yes 27 0.47 Yes -26 0.21 No 48 35.08 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 127495622 - NR_136677 UROS 1 0.33 0.81 38 11.81 92.81 24 4.03 No 15 0.9 Yes 0 0 No -27 0.67 Yes 43 84.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 127502636 - NR_136677 UROS 1 0.2 0.35 18 6.81 90.2 19 5 No 66 1.06 Yes 0 0 No -18 0.77 Yes 52 91.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 58043779 + NM_001330568 USB1 1 0.14 0.17 9 5.74 87.02 40 6.48 Yes 50 0.55 No 0 0 No -39 0.62 No 31 81.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 58044921 + NM_001330568 USB1 1 5 8.1 72 7.23 82.48 28 6.38 Yes 15 1.27 Yes 27 0.94 Yes -27 0.92 Yes 43 90.58 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 58045345 + NM_001330568 USB1 1 0.19 0.32 17 8.1 91.82 17 5.69 Yes 4 1.24 Yes 24 0.35 Yes -32 0.59 No 38 63.56 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 58046224 + NM_001330568 USB1 1 0.87 1.43 49 6.37 90.08 23 4.87 No 70 0.87 Yes 22 0.78 Yes -22 0.66 No 48 60.71 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 58046595 + NM_001330568 USB1 1 0.32 0.56 28 10 82.15 24 5.29 No 50 2.36 Yes 0 0 No -23 0.85 Yes 47 90.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 17326951 + NM_018467 USE1 1 0.32 0.19 12 3.93 81.25 18 4.9 No 17 1.64 Yes 20 0.78 Yes -36 0.69 Yes 34 73.91 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 161010114 - NM_207005 USF1 1 0.27 0.21 11 -8.17 0 17 4 No 9 1.68 Yes 23 0.91 Yes -30 0.91 Yes 40 94.02 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 161010659 - NM_207005 USF1 1 0.11 0.18 12 -4.47 0 67 9.17 Yes 54 0.66 No 0 0 No -54 0.67 Yes 16 85.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 35760673 + NM_003367 USF2 1 0.08 0.11 8 1.67 67.41 27 5.2 No 56 -4.01 No 34 0.23 Yes -21 0.43 No 49 32.87 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 35761661 + NM_003367 USF2 1 0.22 0.61 31 -0.4 0 22 4.58 No 49 2.43 Yes 21 0.72 Yes -21 0.65 No 49 41.74 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 35761195 + NM_003367 USF2 1 0.19 0.26 16 7.39 82.37 20 5.69 Yes 7 2.48 Yes 0 0 No -26 0.52 No 44 79.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 35761986 + NM_003367 USF2 1 0.05 0.15 8 -11.4 0 36 7.35 Yes 23 1.14 Yes 0 0 No -31 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 35766685 + NM_003367 USF2 1 0.13 0.31 16 6.14 79.16 27 5.57 Yes 40 0.58 No 26 0.88 Yes -26 0.52 No 51 68.73 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 35769475 + NM_003367 USF2 1 0.16 0.38 23 10.05 87.26 25 5.57 Yes -3 0.66 No 0 0 No -24 0.95 Yes 46 91.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 35769573 + NM_003367 USF2 1 0.04 0.1 7 -5.76 0 22 4.42 No 37 1.12 Yes 34 0.16 Yes -21 0.71 Yes 40 24.74 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 35769872 + NM_003367 USF2 1 2.5 6.94 72 -2.9 70.39 21 4.8 No 38 1.06 Yes 20 0.72 Yes -20 0.66 No 20 61.8 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 35770041 + NM_003367 USF2 1 0.33 0.94 42 0.93 71.45 17 3.66 No 61 -3.36 No 30 0.81 Yes -17 0.53 No 53 61.29 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 105150688 - NM_001206426 USMG5 1 0.01 0.15 10 10.37 78.13 29 7.41 Yes 16 0.9 Yes 0 0 No -33 0.76 Yes 37 76.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 105151990 - NM_001206426 USMG5 1 0.01 0.21 13 4.85 79.29 19 6.08 Yes 6 1.01 Yes 0 0 No -22 0.62 No 48 63.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 105152039 - NM_001206426 USMG5 1 0.04 0.61 32 -15.51 0 24 6.2 Yes 11 0.46 No 0 0 No -23 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 76703838 + NM_001290049 USO1 1 0.04 0.13 7 -3.82 0 9 3.87 No 22 1.6 Yes 0 0 No -34 0.74 Yes 36 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 76703910 + NM_001290049 USO1 1 0.06 0.18 11 1.72 77.61 16 5.26 No 43 0.27 No 0 0 No -25 0.52 No 32 35.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 76721510 + NM_001290049 USO1 1 0.17 0.21 12 -0.64 0 10 4 No 25 0.11 No 0 0 No -20 0.81 Yes 50 76.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 76711880 + NM_001290049 USO1 1 0.04 0.15 11 8.11 89.32 48 6.93 Yes 38 0.17 No 0 0 No -41 0.27 No 33 43.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 76714848 + NM_001290049 USO1 1 0.55 1.35 46 1.8 0 14 2.66 No 28 1.21 Yes 0 0 No -40 0.9 Yes 30 92.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 76721510 + NM_001290049 USO1 1 0.09 0.11 7 -0.64 0 10 4 No 25 0.11 No 0 0 No -20 0.81 Yes 50 76.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 76721510 + NM_001290049 USO1 1 0.09 0.11 7 -0.64 0 10 4 No 25 0.11 No 0 0 No -20 0.81 Yes 50 76.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 62905471 + NM_003368 USP1 1 0.13 0.19 9 -16.28 0 28 8.86 Yes 15 0.94 Yes 0 0 No -27 0.9 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 62905659 + NM_003368 USP1 1 0.35 0.53 30 4.11 85.17 22 4.9 No 34 0.22 No 0 0 No -21 0.84 Yes 49 91.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 62910350 + NM_003368 USP1 1 0.39 0.79 42 5.64 84.05 39 8.61 Yes 0 0.38 No 0 0 No -22 0.73 Yes 48 70.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 62910921 + NM_003368 USP1 1 0.52 1.06 49 5.84 75.14 28 5.47 No -2 0.83 Yes 0 0 No -28 0.57 No 47 61.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 62914577 + NM_003368 USP1 1 0.09 0.15 9 9.74 92.91 29 5.45 No 16 0.57 No 0 0 No -34 0.42 No 32 63.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 84768661 + NM_001272075 USP10 1 0.41 1 34 5.16 0 40 8.03 Yes 55 0.76 No 0 0 No -39 0.45 No 23 55.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 84785813 + NM_001272075 USP10 1 0.06 0.21 11 8.16 73.64 40 6.93 Yes 2 1.14 Yes 0 0 No -39 0.62 No 39 73.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 84792323 + NM_001272075 USP10 1 0.04 0.14 8 -6.33 72.12 27 6.83 Yes 14 0.85 Yes 0 0 No -26 0.59 No 44 50.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 84792957 + NM_001272075 USP10 1 0.36 0.93 36 0.35 0 24 6.64 Yes 11 0.63 No 34 0.86 Yes -23 0.89 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 84799762 + NM_001272075 USP10 1 0.07 0.15 8 4.66 78.99 20 5.53 No 26 0.36 No 0 0 No -25 0.62 No 45 56.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 84802673 + NM_001272075 USP10 1 0.06 0.14 9 9.76 77.59 12 5.74 Yes 70 -2.55 No 0 0 No -30 0.6 No 40 78.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 47100981 + NM_004651 USP11 1 0.32 0.24 13 1.32 77.64 45 6.41 Yes 68 2.09 Yes 0 0 No -22 0.54 No 41 51.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 47100984 + NM_004651 USP11 1 0.7 0.46 26 1.07 70.23 48 6.62 Yes 71 2.09 Yes 0 0 No -25 0.7 Yes 38 47.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chrX 47104083 + NM_004651 USP11 1 2.32 2.74 67 3.37 75.48 21 6.7 Yes 8 1.8 Yes 0 0 No -37 0.66 No 33 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 27647045 - NM_182488 USP12 1 0.25 0.46 26 6.89 88.14 42 6.38 Yes 32 1.09 Yes 0 0 No -21 0.56 No 49 44.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 27667851 - NM_182488 USP12 1 0.45 0.88 36 6.02 85.45 27 5.17 No 68 0.2 No 0 0 No -29 0.31 No 52 35.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 27669966 - NM_182488 USP12 1 0.04 0.11 8 -2.99 80.38 24 5.76 Yes 11 1.11 Yes 0 0 No -23 0.7 Yes 47 66.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 27674933 - NM_182488 USP12 1 0.09 0.21 13 9.58 85.27 18 5.89 Yes 5 1.37 Yes 0 0 No -28 0.7 Yes 42 85.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 27675706 - NM_182488 USP12 1 0.66 1.67 52 10.8 77.96 27 6.64 Yes 14 0.64 No 0 0 No -30 0.47 No 40 55.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 27690442 - NM_182488 USP12 1 0.35 0.82 31 3.42 0 35 7.07 Yes 22 2.22 Yes 0 0 No -34 0.77 Yes 36 94.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 27690446 - NM_182488 USP12 1 0.1 0.17 10 2.3 84.41 31 6.78 Yes 18 2.23 Yes 0 0 No -30 0.76 Yes 40 94.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179408031 + NM_003940 USP13 1 2.27 0.81 39 5.83 85.49 24 5.78 Yes 11 1.04 Yes 0 0 No -26 0.9 Yes 44 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179428501 + NM_003940 USP13 1 2.51 0.75 32 5.68 76.2 27 5.7 Yes 14 0.42 No 0 0 No -34 0.61 No 44 55.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 179439193 + NM_003940 USP13 1 0.4 0.14 7 1.15 0 36 6.01 Yes 4 1.14 Yes 0 0 No -36 0.8 Yes 34 83.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179450163 + NM_003940 USP13 1 0.53 0.17 11 7.35 81.48 29 5.71 Yes 35 0.06 No 0 0 No -28 0.67 Yes 42 54.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 162982 + NM_005151 USP14 1 0.54 0.89 40 5.02 80.12 20 7.14 Yes 7 1.22 Yes 19 0.65 Yes -19 0.76 Yes 51 86.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 193644 + NM_005151 USP14 1 0.14 0.44 25 10.24 86.01 24 6.53 Yes 43 1.71 Yes 0 0 No -23 0.71 Yes 47 81.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 198050 + NM_005151 USP14 1 0.04 0.13 7 1.23 0 35 4.87 No 33 0.78 Yes 0 0 No -39 0.71 Yes 31 61.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 199192 + NM_005151 USP14 1 0.08 0.25 17 4.88 76.57 30 6.89 Yes 64 -4.75 No 25 0.24 Yes -37 0.44 No 33 55.73 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 202888 + NM_005151 USP14 1 0.07 0.26 17 0.26 0 12 4.24 No 28 1.57 Yes 0 0 No -40 0.71 Yes 30 93.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 210387 + NM_005151 USP14 1 0.04 0.19 12 -7.36 0 31 5.86 Yes 12 0.95 Yes 0 0 No -30 0.58 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 62697212 + NM_006313 USP15 1 0.12 0.39 21 8.78 90.31 20 5.62 Yes 7 1.26 Yes 0 0 No -19 0.48 No 45 47.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 62698453 + NM_006313 USP15 1 3.57 11.35 71 4.34 73.94 18 5.42 No 5 0.54 No 28 0.85 Yes -28 0.79 Yes 42 88.25 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 62699751 + NM_006313 USP15 1 0.1 0.31 16 -3.88 63.57 37 7.59 Yes 24 0.71 No 0 0 No -29 0.85 Yes 17 77.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 62699760 + NM_006313 USP15 1 0.08 0.28 14 -8.81 0 12 4.24 No 33 0.71 No 0 0 No -38 0.83 Yes 25 23.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 62706066 + NM_006313 USP15 1 0.11 0.33 15 11.59 93.65 22 5.12 No 13 0.54 No 21 0.67 Yes -21 0.88 Yes 49 88.33 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 62743001 + NM_006313 USP15 1 0.85 0.65 30 8.84 84.86 54 9.41 Yes 8 0.79 Yes 25 0.8 Yes -25 0.66 No 45 62.74 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 62728946 + NM_006313 USP15 1 25.43 19.56 72 11.32 83.67 27 5.74 Yes 14 0.49 No 26 0.88 Yes -26 0.88 Yes 44 95.91 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 62736448 + NM_006313 USP15 1 0.34 0.26 15 9.14 89.4 24 5.29 No 46 1.53 Yes 0 0 No -23 0.86 Yes 47 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 62743001 + NM_006313 USP15 1 198.11 156.88 72 8.84 84.86 54 9.41 Yes 8 0.79 Yes 25 0.8 Yes -25 0.66 No 45 62.74 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 62764674 + NM_006313 USP15 1 0.23 0.57 29 9.44 84.08 36 7.51 Yes 23 1.53 Yes 0 0 No -35 0.39 No 35 78.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 62768170 + NM_006313 USP15 1 3.26 8.5 71 10.56 80.75 25 5.42 No 73 0.54 No 24 0.73 Yes -24 0.84 Yes 46 86.69 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 62774915 + NM_006313 USP15 1 0.43 1.14 47 2.32 0 15 4.55 No 40 0.74 No 0 0 No -57 0.49 No 13 45.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 62783366 + NM_006313 USP15 1 0.29 0.53 24 -3.94 0 16 4.12 No 20 -3.05 No 23 0.94 Yes -46 0.26 No 54 45.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 62783413 + NM_006313 USP15 1 0.34 0.57 32 3.66 65.64 27 4.65 No 39 0.25 No 0 0 No -20 0.58 No 50 48.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 62783562 + NM_006313 USP15 1 1.13 2.86 64 -3.27 0 16 4.47 No 75 -6.01 No 22 0.85 Yes -37 0.69 Yes 33 37.16 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 62785599 + NM_006313 USP15 1 0.27 0.26 15 -1.49 0 31 5.95 Yes 54 -3.91 No 0 0 No -30 0.6 No 40 50.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 62786035 + NM_006313 USP15 1 1.29 2.47 62 3.77 77.8 37 6.12 Yes 24 0.97 Yes 23 0.93 Yes -36 0.82 Yes 34 78.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 62790115 + NM_006313 USP15 1 0.13 0.25 12 4.58 77.68 40 7.07 Yes 51 1.13 Yes 0 0 No -17 0.56 No 58 34.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 30402342 + NM_001032410 USP16 1 0.1 0.21 12 11.29 90.09 37 6.16 Yes 24 0.22 No 0 0 No -36 0.55 No 39 36.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30402464 + NM_001032410 USP16 1 0.15 0.36 18 9.42 89.64 23 4.94 No 71 1.5 Yes 0 0 No -22 0.85 Yes 48 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30409599 + NM_001032410 USP16 1 71.25 70.13 72 5.73 88.63 24 8.55 Yes 11 1.44 Yes 20 0.74 Yes -23 0.49 No 36 76.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr21 30411340 + NM_001032410 USP16 1 0.04 0.11 7 -2.32 0 24 4.59 No 2 0.67 No 29 0.79 Yes -23 0.75 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr21 30411803 + NM_001032410 USP16 1 0.09 0.15 10 1.15 80.98 37 6.48 Yes 24 1 Yes 0 0 No -36 0.71 Yes 34 80.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30415745 + NM_001032410 USP16 1 0.13 0.19 9 -14.5 71.03 40 7.08 Yes 13 1.01 Yes 0 0 No -25 0.88 Yes 45 81.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 30419295 + NM_001032410 USP16 1 0.76 1.71 59 11.13 85.17 18 4.03 No 5 0.95 Yes 0 0 No -31 0.74 Yes 39 63.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 30419499 + NM_001032410 USP16 1 0.06 0.14 9 7.15 80.92 38 6.08 Yes 67 -2.65 No 0 0 No -30 0.33 No 40 40.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 30419548 + NM_001032410 USP16 1 2.98 6.69 72 5.13 79.92 33 5.99 Yes 20 0.2 No 0 0 No -32 0.78 Yes 38 89.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 18642914 + NM_017414 USP18 1 0.22 0.21 13 4.04 76.8 21 4.69 No 17 0.2 No 26 0.9 Yes -20 0.85 Yes 50 64.69 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 18653581 + NM_017414 USP18 1 0.35 0.64 32 6.77 85.85 30 6.57 Yes 38 2 Yes 0 0 No -29 0.83 Yes 41 88.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 18659542 + NM_017414 USP18 1 0.26 0.42 24 6.12 0 27 7.34 Yes 14 1.99 Yes 0 0 No -26 0.7 Yes 44 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49147237 - NM_006677 USP19 1 5.04 0.33 20 0.75 0 9 3.87 No 66 1.62 Yes 0 0 No -24 0.87 Yes 46 68.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 49147303 - NM_006677 USP19 1 18.54 1.24 42 5.12 71.7 13 8.28 Yes 0 1.63 Yes 0 0 No -19 0.29 No 53 42.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49149827 - NM_006677 USP19 1 1.01 0.85 42 3.04 0 17 4.24 No 17 -0.7 No 0 0 No -29 0.7 Yes 41 25.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 49153312 - NM_006677 USP19 1 1.01 0.24 16 3.65 82.86 35 6.06 Yes 70 1.12 Yes 0 0 No -25 0.52 No 45 67.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49153378 - NM_006677 USP19 1 233.76 53.92 72 10.48 79.71 32 5.65 Yes 19 2.45 Yes 31 0.93 Yes -31 0.75 Yes 39 93.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 49155219 - NM_006677 USP19 1 33.21 19.22 72 5.45 85.13 28 5.36 No 15 1.17 Yes 24 0.89 Yes -27 0.88 Yes 43 85.96 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 49155297 - NM_006677 USP19 1 0.46 0.28 13 -5.68 0 16 4.24 No 64 0.97 Yes 19 0.51 Yes -15 0.81 Yes 55 63.07 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 49155548 - NM_006677 USP19 1 0.75 0.65 31 -3.91 0 9 3.87 No 16 1.45 Yes 0 0 No -28 0.53 No 42 72.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 49155552 - NM_006677 USP19 1 0.55 0.47 28 -0.59 84.41 25 7.02 Yes 12 1.47 Yes 0 0 No -24 0.58 No 46 71.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 132631056 + NM_001008563 USP20 1 0.41 0.11 8 9.13 87.32 19 4.73 No 12 -1.42 No 0 0 No -18 0.46 No 46 49.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 132631186 + NM_001008563 USP20 1 0.57 0.17 12 9.47 83.92 25 5.2 No 16 1.39 Yes 0 0 No -28 0.86 Yes 42 90 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 132637133 + NM_001008563 USP20 1 0.53 0.14 10 4.01 78.85 18 5.91 Yes 37 1.7 Yes 0 0 No -49 0.45 No 21 68.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 132638460 + NM_001008563 USP20 1 0.91 0.32 17 9.38 83.57 31 7.8 Yes 73 0.91 Yes 0 0 No -30 0.59 No 40 67.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 132642657 + NM_001008563 USP20 1 25.03 4.94 72 2.58 65.61 25 6.24 Yes 12 1.28 Yes 24 0.9 Yes -24 0.95 Yes 46 93.2 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 132642662 + NM_001008563 USP20 1 1.22 0.25 14 -4.06 0 30 6.63 Yes 17 1.27 Yes 0 0 No -29 0.94 Yes 41 84.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161133957 + NM_001319847 USP21 1 0.88 0.25 17 2.5 0 29 6.78 Yes 16 2.06 Yes 0 0 No -28 0.82 Yes 42 89.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 161134822 + NM_001319847 USP21 1 0.4 0.25 17 -7.15 0 37 5.95 Yes 11 0.27 No 27 0.61 Yes -36 0.62 No 34 74.49 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 161134860 + NM_001319847 USP21 1 0.4 0.25 15 4.77 78.44 28 5.83 Yes 49 0.27 No 27 0.61 Yes -27 0.8 Yes 43 75.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 20919237 - NM_015276 USP22 1 0.16 0.56 29 3.46 77.9 26 5.45 No 33 0.58 No 29 0.95 Yes -25 0.87 Yes 45 81.02 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 55537164 - NM_015306 USP24 1 1.13 0.71 34 8.57 91.63 21 6 Yes 8 1.03 Yes 29 0.88 Yes -29 0.75 Yes 50 84.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 55561009 - NM_015306 USP24 1 0.24 0.22 14 5.59 82.96 37 5.78 Yes 65 0.82 Yes 23 0.79 Yes -26 0.72 Yes 44 64.69 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 55561098 - NM_015306 USP24 1 0.22 0.26 14 5.74 92.69 27 5.17 No 38 0.79 Yes 32 0.77 Yes -23 0.53 No 47 50.16 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 55562294 - NM_015306 USP24 1 0.2 0.11 8 -6.12 77.37 46 6.33 Yes 24 0.88 Yes 0 0 No -36 0.67 Yes 34 74.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 55571195 - NM_015306 USP24 1 1.14 0.86 39 2.68 66.02 28 7.41 Yes 15 1.73 Yes 0 0 No -31 0.8 Yes 39 85.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 55590478 - NM_015306 USP24 1 0.42 0.18 13 5.96 85.47 21 4.74 No 33 0.45 No 0 0 No -23 0.68 Yes 47 82.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 55603378 - NM_015306 USP24 1 0.43 0.33 17 3.42 66.47 42 5.53 No 29 1 Yes 22 0.66 Yes -36 0.43 No 35 48.8 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 55607401 - NM_015306 USP24 1 0.26 0.18 12 -1.18 0 24 4.46 No 11 0.81 Yes 0 0 No -23 0.81 Yes 47 79.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 55613470 - NM_015306 USP24 1 0.28 0.22 11 -6.24 72 49 7.48 Yes 36 1.2 Yes 0 0 No -35 0.93 Yes 35 94.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 55617645 - NM_015306 USP24 1 1.18 0.92 38 2.92 0 40 6.71 Yes 27 0.91 Yes 0 0 No -39 0.88 Yes 31 91.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 55617649 - NM_015306 USP24 1 2.48 2.1 63 7.63 90.91 36 6.4 Yes 23 0.92 Yes 0 0 No -35 0.89 Yes 35 89.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 55624708 - NM_015306 USP24 1 0.28 0.18 10 -10.74 56.02 43 6.86 Yes 30 0.01 No 0 0 No -42 0.65 No 28 87.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 55643803 - NM_015306 USP24 1 35.92 6.11 71 -0.08 78.29 45 6.87 Yes 32 1.36 Yes 0 0 No -44 0.84 Yes 26 95.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 17136556 + NM_013396 USP25 1 2.88 2.18 66 8.06 89.24 21 7.42 Yes 8 0.96 Yes 0 0 No -20 0.41 No 43 55.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 17137100 + NM_013396 USP25 1 3.01 2.36 63 -5.04 0 11 4.12 No 76 0.2 No 0 0 No -37 0.7 Yes 33 78.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 17137123 + NM_013396 USP25 1 0.59 0.46 27 4.18 69.45 30 5.49 No 1 0.27 No 0 0 No -25 0.79 Yes 45 83.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 17138320 + NM_013396 USP25 1 3.48 2.82 67 -4.31 0 67 6.9 Yes 54 0.87 Yes 0 0 No -29 0.68 Yes 41 57.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 17142098 + NM_013396 USP25 1 0.15 0.13 7 4.59 84.91 57 6.12 Yes 38 1.09 Yes 0 0 No -33 0.7 Yes 37 77.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 17145458 + NM_013396 USP25 1 0.68 0.5 26 7.58 89.93 25 5.53 No 32 0.92 Yes 0 0 No -24 0.85 Yes 46 56.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr21 17150209 + NM_013396 USP25 1 0.13 0.1 7 -8.87 0 18 4.12 No 35 0.44 No 23 0.8 Yes -44 0.42 No 25 41.27 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr21 17163822 + NM_013396 USP25 1 0.23 0.24 13 -13.35 64.26 33 8.68 Yes 20 0.55 No 0 0 No -32 0.48 No 38 51.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 17152987 + NM_013396 USP25 1 0.98 1.13 49 7.35 89.01 19 3.72 No 30 0.7 No 0 0 No -26 0.92 Yes 44 85.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 17163822 + NM_013396 USP25 1 1.16 1.28 54 -13.35 64.26 33 8.68 Yes 20 0.55 No 0 0 No -32 0.48 No 38 51.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 17169417 + NM_013396 USP25 1 0.24 0.14 9 0.38 0 21 4.58 No 8 0.14 No 0 0 No -20 0.89 Yes 50 91.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 17181131 + NM_013396 USP25 1 0.43 0.38 18 -0.66 0 27 4.24 No 31 -2.3 No 0 0 No -27 0.62 No 43 72.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 17182084 + NM_013396 USP25 1 0.24 0.18 8 5.26 75.03 16 5.17 No 35 -3.97 No 0 0 No -21 0.48 No 49 27.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 17194606 + NM_013396 USP25 1 8.04 5 72 6.65 83.72 17 5.31 No 4 0.97 Yes 0 0 No -36 0.91 Yes 34 94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 17197729 + NM_013396 USP25 1 0.59 0.57 27 7.41 84.4 21 5.2 No 72 1.44 Yes 0 0 No -25 0.51 No 50 61.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 17205645 + NM_013396 USP25 1 0.15 0.17 9 3.5 72.38 20 5.44 No 27 0.75 No 28 0.66 Yes -39 0.47 No 51 45.94 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr21 17208232 + NM_013396 USP25 1 0.15 0.17 11 10.94 93.78 23 4.84 No 34 0.46 No 0 0 No -22 0.62 No 48 69.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr21 17214725 + NM_013396 USP25 1 0.23 0.24 15 -7.61 0 16 4.05 No 14 0.7 No 0 0 No -15 0.5 No 40 47.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr21 17222095 + NM_013396 USP25 1 5.25 4.64 70 9.15 83.57 38 5.14 No 5 1.18 Yes 23 0.73 Yes -23 0.73 Yes 47 76.57 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr21 17232940 + NM_013396 USP25 1 0.27 0.29 16 6.35 87.1 20 6.04 Yes 7 0.53 No 0 0 No -22 0.78 Yes 48 77.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr21 17240270 + NM_013396 USP25 1 0.16 0.18 12 2.66 79.34 44 6.58 Yes 31 0.16 No 0 0 No -30 0.45 No 27 57.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 17250054 + NM_013396 USP25 1 0.37 0.29 15 6.51 81.88 81 6.56 Yes 37 1.31 Yes 0 0 No -28 0.83 Yes 42 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 113681190 - NM_001346270 USP28 1 0.28 0.17 10 8.07 87.64 32 6.75 Yes 37 0.16 No 0 0 No -26 0.84 Yes 44 87.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 113683205 - NM_001346270 USP28 1 0.36 0.19 12 5.74 79.91 31 5.18 No 18 1.24 Yes 0 0 No -26 0.88 Yes 44 93.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 113685987 - NM_001346270 USP28 1 0.26 0.15 9 3.31 74.78 37 7.48 Yes 24 1.95 Yes 0 0 No -36 0.79 Yes 34 91.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 113686049 - NM_001346270 USP28 1 0.44 0.24 12 7.61 81.37 25 5.39 No 12 0.55 No 0 0 No -24 0.91 Yes 46 78.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 113691081 - NM_001346270 USP28 1 0.84 0.42 19 8.01 86.97 27 8.6 Yes 14 1.66 Yes 0 0 No -26 0.91 Yes 44 95.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 113701669 - NM_001346270 USP28 1 14.25 5.39 72 5.45 77.13 29 5.56 Yes 55 0.56 No 24 0.56 Yes -24 0.28 No 46 43.72 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 113701669 - NM_001346270 USP28 1 0.64 0.22 12 5.45 77.13 29 5.56 Yes 55 0.56 No 24 0.56 Yes -24 0.28 No 46 43.72 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 113706050 - NM_001346270 USP28 1 1.18 0.78 35 8.93 81.67 31 5.48 No 18 0.98 Yes 30 0.7 Yes -30 0.84 Yes 40 89.93 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 113712488 - NM_001346270 USP28 1 1.67 0.9 41 -1.57 71.35 28 6.27 Yes 15 0.79 Yes 0 0 No -27 0.87 Yes 43 94.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63819118 + NR_046341 USP3 1 3.69 0.25 14 1.29 0 32 5.47 No 35 1.02 Yes 0 0 No -31 0.93 Yes 39 93.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63822696 + NR_046341 USP3 1 1.03 0.14 9 6.53 86.16 20 7.14 Yes 7 1.22 Yes 19 0.71 Yes -19 0.81 Yes 51 90.38 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 63826001 + NR_046341 USP3 1 9.66 9.64 72 8.02 78.6 45 8.35 Yes 32 1.3 Yes 31 0.8 Yes -32 0.5 No 38 66.42 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 63831102 + NR_046341 USP3 1 0.23 0.39 25 1.76 74.18 15 3.94 No 7 0.16 No 0 0 No -23 0.96 Yes 47 97.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 63834253 + NR_046341 USP3 1 0.59 1.01 38 10.55 86.92 68 5.74 Yes 8 0.26 No 29 0.62 Yes -29 0.57 No 41 50.41 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 63848870 + NR_046341 USP3 1 0.12 0.17 10 -0.18 0 37 6.5 Yes 24 1.42 Yes 0 0 No -39 0.74 Yes 31 75.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63852087 + NR_046341 USP3 1 0.32 0.28 15 5.58 78.36 25 5.29 No 18 0.63 No 0 0 No -24 0.75 Yes 46 55.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 63859407 + NR_046341 USP3 1 0.13 0.14 9 0.48 82.57 25 6.56 Yes 12 2.06 Yes 0 0 No -24 0.82 Yes 46 90.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63859411 + NR_046341 USP3 1 2.76 3.17 64 1.72 0 29 6.85 Yes 16 2.06 Yes 0 0 No -28 0.83 Yes 42 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 63865148 + NR_046341 USP3 1 0.13 0.14 9 0.46 0 19 4.47 No 6 1.22 Yes 0 0 No -18 0.9 Yes 52 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 109510112 + NM_001301175 USP30 1 5.39 0.88 40 3.89 77.86 33 6.24 Yes 28 0.63 No 0 0 No -32 0.92 Yes 38 90.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 109511750 + NM_001301175 USP30 1 1.06 0.18 9 8.63 91.34 38 7.37 Yes 25 0.98 Yes 0 0 No -27 0.63 No 43 76.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23116878 - NM_020718 USP31 1 2.63 0.78 42 6.07 74.42 13 5.39 No 24 0.54 No 0 0 No -24 0.77 Yes 46 81.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23118736 - NM_020718 USP31 1 12.74 3.13 67 4.85 81.45 25 4.77 No 54 0.76 No 0 0 No -24 0.6 No 45 59.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23120103 - NM_020718 USP31 1 1.1 0.13 9 6.64 80.33 34 7.44 Yes 21 1.11 Yes 0 0 No -33 0.77 Yes 37 75.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23127150 - NM_020718 USP31 1 3.19 0.36 21 10.62 89.4 37 8.77 Yes 24 2.68 Yes 0 0 No -36 0.56 No 34 70.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23131568 - NM_020718 USP31 1 5.32 0.61 34 9.79 90.46 17 5.47 No 64 1.11 Yes 0 0 No -23 0.75 Yes 47 81.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58264034 - NM_032582 USP32 1 0.18 0.14 7 8.18 84.68 70 9.1 Yes 57 1.41 Yes 0 0 No -26 0.89 Yes 44 92.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58329106 - NM_032582 USP32 1 0.26 0.18 11 6.21 79.26 27 6.84 Yes 63 0.81 Yes 0 0 No -26 0.87 Yes 44 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58335286 - NM_032582 USP32 1 0.42 0.22 15 6.75 90.5 22 6.09 Yes 9 0.89 Yes 0 0 No -25 0.41 No 46 52.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 58341711 - NM_032582 USP32 1 2.73 1.46 48 9.29 88.27 21 5.66 Yes 8 1.23 Yes 0 0 No -20 0.8 Yes 50 88.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58343442 - NM_032582 USP32 1 0.33 0.19 10 2.67 0 17 4.46 No 30 0.36 No 0 0 No -32 0.41 No 38 81.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 58354633 - NM_032582 USP32 1 0.83 0.71 30 4.41 86.11 19 4.68 No 19 0.09 No 0 0 No -18 0.74 Yes 48 74.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 58386960 - NM_032582 USP32 1 0.55 0.24 14 8.73 86.87 28 6.23 Yes 73 1.27 Yes 0 0 No -27 0.7 Yes 43 80.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58409607 - NM_032582 USP32 1 0.6 0.24 14 2.57 0 30 8.36 Yes 17 1.32 Yes 0 0 No -29 0.92 Yes 41 87.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 58454654 - NM_032582 USP32 1 0.44 0.26 15 9.01 93.71 28 6.56 Yes 73 0.09 No 0 0 No -35 0.4 No 49 25.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 58457761 - NM_032582 USP32 1 0.78 0.38 13 9.25 86.62 21 7.21 Yes 8 1.44 Yes 0 0 No -20 0.84 Yes 50 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78186272 - NM_201626 USP33 1 0.38 0.24 15 8.02 74.16 33 6.46 Yes 20 0.14 No 0 0 No -31 0.48 No 38 66.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 78187611 - NM_201626 USP33 1 105.45 29.89 72 8.31 79.15 14 6.54 Yes 50 0.88 Yes 28 0.41 Yes -28 0.69 Yes 38 51.22 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 78189124 - NM_201626 USP33 1 0.12 0.14 8 0.2 0 48 5.73 Yes 10 0.93 Yes 0 0 No -33 0.8 Yes 37 68.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 78192324 - NM_201626 USP33 1 0.71 0.68 33 9.03 88.34 32 7.29 Yes 19 1.12 Yes 0 0 No -31 0.87 Yes 39 81.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78192629 - NM_201626 USP33 1 0.26 0.25 14 5.71 69.02 32 6.85 Yes 44 0.67 No 0 0 No -31 0.88 Yes 39 94.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 78197886 - NM_201626 USP33 1 0.96 1.01 46 7.84 93.96 24 6 Yes 11 0.79 Yes 0 0 No -23 0.86 Yes 47 86.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78206620 - NM_201626 USP33 1 1.09 0.74 33 -0.49 0 43 5.66 Yes 30 0.16 No 28 0.87 Yes -43 0.54 No 37 74.9 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 78211283 - NM_201626 USP33 1 0.68 0.13 8 -8.5 73.72 36 6.08 Yes 58 0.48 No 0 0 No -31 0.53 No 41 56.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 78212242 - NM_201626 USP33 1 6.19 1.17 48 8.46 84.8 33 7.34 Yes 20 1.1 Yes 32 0.7 Yes -32 0.87 Yes 38 84.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 61417574 - NM_014709 USP34 1 0.92 1.32 51 -0.8 77.45 43 5.15 No 45 0.71 No 26 0.38 Yes -34 0.6 No 36 69.75 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 61433181 - NM_014709 USP34 1 0.07 0.11 7 6.14 79.35 21 6.04 Yes 8 1.68 Yes 0 0 No -20 0.32 No 50 39.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 61436104 - NM_014709 USP34 1 0.24 0.24 16 3.64 0 12 4.24 No 17 1.23 Yes 0 0 No -35 0.65 No 35 72.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 61441354 - NM_014709 USP34 1 0.95 1.28 48 1.15 69.69 49 7.14 Yes 2 0.97 Yes 24 0.62 Yes -30 0.35 No 22 71.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 61441414 - NM_014709 USP34 1 0.31 0.42 22 8.06 83.84 26 5.47 No 20 1.38 Yes 25 0.78 Yes -23 0.3 No 52 51.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 61441437 - NM_014709 USP34 1 0.15 0.21 10 4.96 79.27 49 7.21 Yes -3 1.23 Yes 25 0.78 Yes -32 0.54 No 38 78.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 61441780 - NM_014709 USP34 1 0.2 0.26 12 3.89 82.33 25 4.99 No 62 1.48 Yes 0 0 No -24 0.84 Yes 46 69.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61442196 - NM_014709 USP34 1 0.29 0.39 21 6.18 90.72 16 4.09 No 7 0.54 No 0 0 No -23 0.44 No 47 66.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61453880 - NM_014709 USP34 1 0.48 0.6 35 6.59 81.28 22 4.89 No 9 0.91 Yes 0 0 No -22 0.73 Yes 49 79.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61456126 - NM_014709 USP34 1 0.31 0.38 20 1.71 0 18 4.64 No 16 0.65 No 0 0 No -28 0.81 Yes 42 79.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61463235 - NM_014709 USP34 1 0.05 0.13 7 1.64 58.64 37 6.08 Yes 75 0.87 Yes 29 0.7 Yes -36 0.46 No 34 68.89 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 61463351 - NM_014709 USP34 1 0.08 0.11 7 1.39 63.42 30 5.19 No 27 0.16 No 0 0 No -57 0.36 No 53 30.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61468930 - NM_014709 USP34 1 0.59 0.96 41 8.93 86.96 13 4.95 No 0 0.45 No 0 0 No -19 0.39 No 49 33.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61475288 - NM_014709 USP34 1 0.11 0.11 7 7.65 88.08 25 4.93 No 12 0.82 Yes 0 0 No -24 0.87 Yes 46 67.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 61484251 - NM_014709 USP34 1 0.06 0.13 8 3.86 0 30 5.7 Yes 17 1.17 Yes 25 0.88 Yes -29 0.69 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 61492696 - NM_014709 USP34 1 0.29 0.43 27 10.61 86.09 43 6.86 Yes 55 0.23 No 27 0.57 Yes -42 0.88 Yes 28 96.57 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 61500776 - NM_014709 USP34 1 0.3 0.31 18 7.91 90.21 22 4.83 No 3 1.82 Yes 0 0 No -21 0.97 Yes 49 94.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61505418 - NM_014709 USP34 1 0.29 0.39 21 6.32 89.01 43 7.98 Yes 30 0.91 Yes 0 0 No -38 0.51 No 41 59.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 61507480 - NM_014709 USP34 1 0.49 0.79 42 -0.73 0 30 4.57 No 43 0.36 No 25 0.95 Yes -29 0.88 Yes 41 84.38 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 61507503 - NM_014709 USP34 1 0.06 0.1 7 2.01 72 33 6.03 Yes 20 0.39 No 25 0.95 Yes -33 0.56 No 37 61.28 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 61510351 - NM_014709 USP34 1 1.56 1.57 53 4.91 79.36 16 5.52 No 54 1.26 Yes 0 0 No -25 0.76 Yes 45 82.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61515904 - NM_014709 USP34 1 0.16 0.21 12 6.92 69.03 31 5.76 Yes 12 0.77 No 0 0 No -30 0.91 Yes 40 89.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61522424 - NM_014709 USP34 1 0.61 0.88 41 -10.69 70.87 27 5.74 Yes 53 0.28 No 0 0 No -26 0.79 Yes 44 79.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61522458 - NM_014709 USP34 1 0.66 0.96 39 -1.88 0 32 5.96 Yes 19 0.31 No 24 0.78 Yes -32 0.85 Yes 38 91.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 61524059 - NM_014709 USP34 1 0.13 0.13 8 -1.09 76.14 30 4.33 No 27 1.41 Yes 0 0 No -29 0.53 No 41 52.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 61533729 - NM_014709 USP34 1 0.08 0.17 9 7.93 87.72 14 4.82 No 1 1.29 Yes 0 0 No -25 0.72 Yes 45 77.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61538745 - NM_014709 USP34 1 5.44 8.94 72 1.88 70.62 25 5.1 No 68 -5.7 No 0 0 No -20 0.76 Yes 50 68.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 61541289 - NM_014709 USP34 1 1.53 2.38 57 8.75 78.46 41 6.31 Yes 32 0.46 No 0 0 No -31 0.9 Yes 39 94.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61544849 - NM_014709 USP34 1 0.17 0.32 19 5.13 75.57 22 5.61 Yes 76 1.01 Yes 0 0 No -21 0.61 No 46 71.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 61549338 - NM_014709 USP34 1 1 1.53 48 7.64 90.14 28 5.29 No 57 0.39 No 0 0 No -27 0.64 No 43 49.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61561055 - NM_014709 USP34 1 0.1 0.13 9 5.05 84.64 43 7.14 Yes 30 0.87 Yes 0 0 No -37 0.52 No 33 58.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 61566173 - NM_014709 USP34 1 1.95 2.19 57 7.5 85.05 61 7.94 Yes 11 0.66 No 0 0 No -23 0.83 Yes 47 91.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61573483 - NM_014709 USP34 1 0.22 0.24 16 9.82 88.27 31 6.34 Yes 18 1.65 Yes 30 0.88 Yes -30 0.64 No 40 87.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 61576419 - NM_014709 USP34 1 0.61 0.89 37 2.45 83.94 43 6.51 Yes 34 0.78 Yes 0 0 No -38 0.82 Yes 32 94.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61585326 - NM_014709 USP34 1 0.07 0.11 7 8.91 86.79 40 7.64 Yes 27 1.61 Yes 0 0 No -27 0.66 No 43 52.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 61597113 - NM_014709 USP34 1 0.08 0.13 9 10.44 90.79 34 9.38 Yes 21 1.77 Yes 0 0 No -33 0.86 Yes 37 81.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61597363 - NM_014709 USP34 1 0.8 1.21 55 7.28 78.73 24 5.75 Yes 30 1.06 Yes 0 0 No -28 0.55 No 42 60.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 61597537 - NM_014709 USP34 1 0.08 0.14 8 2.42 0 10 4.29 No 65 0.74 No 0 0 No -34 0.69 Yes 36 56.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 61597563 - NM_014709 USP34 1 0.16 0.28 18 1.46 59.03 35 5.83 Yes 39 0.73 No 22 0.81 Yes -30 0.34 No 36 41.15 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 61598924 - NM_014709 USP34 1 0.38 0.83 39 4.73 82.51 23 5 No 76 0.19 No 0 0 No -22 0.37 No 48 31.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61606640 - NM_014709 USP34 1 0.14 0.22 11 0.93 82.46 53 8.28 Yes 48 0.18 No 0 0 No -50 0.53 No 20 79.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 61609744 - NM_014709 USP34 1 0.57 0.83 36 7.49 79.22 33 5.91 Yes 20 0.5 No 0 0 No -30 0.49 No 38 70.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 61610852 - NM_014709 USP34 1 0.57 0.94 42 4.51 83.87 36 5.29 No 23 1.27 Yes 0 0 No -35 0.71 Yes 35 80.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61625031 - NM_014709 USP34 1 0.3 0.58 26 4.33 84.41 24 7.18 Yes 11 0.88 Yes 0 0 No -23 0.84 Yes 47 88.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61688113 - NM_014709 USP34 1 0.25 0.22 13 4.58 84.41 39 6.83 Yes 26 2.2 Yes 0 0 No -38 0.74 Yes 32 90.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 77922555 + NM_020798 USP35 1 3.86 0.15 10 9.91 87.76 38 5.99 Yes 55 1.15 Yes 0 0 No -21 0.55 No 46 57.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 76793985 - NM_001321291 USP36 1 224.19 29.17 72 9.57 94.37 24 5.91 Yes 38 -0.69 No 26 0.43 Yes -26 0.61 No 44 61.69 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 76798621 - NM_001321291 USP36 1 4.71 2.57 66 4.82 72.98 23 5.83 Yes 10 1.88 Yes 25 0.96 Yes -22 0.85 Yes 48 89.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 76798938 - NM_001321291 USP36 1 0.46 0.28 15 5.88 85.71 14 5.31 No 55 -2.86 No 0 0 No -28 0.65 No 42 83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 76799784 - NM_001321291 USP36 1 0.27 0.11 8 2.42 77.24 20 4.9 No 7 0.12 No 0 0 No -19 0.89 Yes 51 82.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76799886 - NM_001321291 USP36 1 0.66 0.22 11 6.86 82.29 31 5.17 No 64 -1.36 No 0 0 No -30 0.7 Yes 40 81.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76799986 - NM_001321291 USP36 1 0.46 0.18 10 2.31 76.95 27 5.69 Yes 54 0.93 Yes 0 0 No -26 0.87 Yes 44 84.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76802403 - NM_001321291 USP36 1 0.45 0.32 18 3.7 70.12 163 8.18 Yes 5 1.33 Yes 31 0.47 Yes -17 0.5 No 20 70.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 76810016 - NM_001321291 USP36 1 0.26 0.19 13 4.32 72.99 29 5.74 Yes 16 1.52 Yes 0 0 No -28 0.87 Yes 42 97.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76816091 - NM_001321291 USP36 1 0.43 0.32 15 -1.14 0 59 7.28 Yes 46 1.06 Yes 0 0 No -28 0.82 Yes 42 86.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 76817139 - NM_001321291 USP36 1 0.13 0.13 8 -0.83 0 36 6.64 Yes NA NA NA 0 0 No -26 0.73 Yes 44 87.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76819266 - NM_001321291 USP36 1 1.08 0.64 31 9.92 90.09 25 6 Yes -3 0.9 Yes 24 0.69 Yes -24 0.64 No 46 63.54 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 76823428 - NM_001321291 USP36 1 0.25 0.28 15 0.62 79.71 35 6.4 Yes 35 0.18 No 0 0 No -27 0.77 Yes 36 73.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 76831580 - NM_001321291 USP36 1 2.25 1.78 52 3.03 0 45 9.22 Yes 32 1.74 Yes 0 0 No -44 0.9 Yes 26 97.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219319769 - NM_020935 USP37 1 0.53 0.14 7 6.62 77.85 67 7.32 Yes -3 0.9 Yes 24 0.81 Yes -57 0.37 No 13 49.98 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 219339647 - NM_020935 USP37 1 0.34 0.18 9 4.7 83.36 23 4.99 No 10 0.14 No 22 0.95 Yes -22 0.85 Yes 48 95.09 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 219343589 - NM_020935 USP37 1 0.52 0.24 10 8.21 85.65 49 9.43 Yes 0 0.61 No 0 0 No -32 0.45 No 38 75.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 219353082 - NM_020935 USP37 1 0.39 0.26 15 7.99 80.31 26 6.02 Yes 13 1.69 Yes 0 0 No -25 0.68 Yes 45 79.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219360374 - NM_020935 USP37 1 0.42 0.21 10 3.51 0 42 7.56 Yes 76 0.57 No 0 0 No -27 0.67 Yes 43 68.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 219361693 - NM_020935 USP37 1 0.59 0.28 13 8.44 80.33 33 5.78 Yes 55 0.49 No 0 0 No -32 0.58 No 38 41.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 219382913 - NM_020935 USP37 1 0.3 0.18 11 6.25 92.65 27 7.47 Yes 14 0.36 No 0 0 No -26 0.91 Yes 44 93.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 219391450 - NM_020935 USP37 1 12.79 7.79 71 8.09 79.16 39 6.48 Yes 26 0.8 Yes 0 0 No -38 0.96 Yes 32 98.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219396640 - NM_020935 USP37 1 0.4 0.22 13 11.14 82 30 5.74 Yes 49 0.57 No 0 0 No -29 0.8 Yes 41 75.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 219423397 - NM_020935 USP37 1 0.23 0.13 9 -1.1 0 32 6.08 Yes 56 1.14 Yes 0 0 No -31 0.64 No 39 54.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 219423441 - NM_020935 USP37 1 15.25 7.58 72 10.4 85.22 25 5.29 No 12 1.19 Yes 25 0.74 Yes -25 0.66 No 45 60.01 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 219426989 - NM_020935 USP37 1 0.34 0.17 10 9.04 85.64 24 4.94 No 70 0.65 No 0 0 No -23 0.68 Yes 47 65.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 219430109 - NM_020935 USP37 1 0.84 0.33 19 11.42 89.11 32 6.16 Yes 19 1.39 Yes 0 0 No -31 0.75 Yes 39 90.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85848329 + NR_046347 USP39 1 0.43 0.76 34 5.05 0 21 4.58 No 67 1.52 Yes 20 0.93 Yes -20 0.91 Yes 50 95.03 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 85850768 + NR_046347 USP39 1 9.39 0.49 25 11.46 89.54 25 4.63 No 43 1.17 Yes 24 0.71 Yes -22 0.69 Yes 48 75.77 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 85850768 + NR_046347 USP39 1 3948.07 204.61 72 11.46 89.54 25 4.63 No 43 1.17 Yes 24 0.71 Yes -22 0.69 Yes 48 75.77 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 85859595 + NR_046347 USP39 1 0.48 0.49 28 3.01 0 42 6.19 Yes 19 0.4 No 0 0 No -31 0.74 Yes 39 65.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 85864514 + NR_046347 USP39 1 0.1 0.15 9 7.42 89.71 16 5.53 No -1 1.59 Yes 0 0 No -56 0.46 No 45 73.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 85866329 + NR_046347 USP39 1 0.16 0.31 17 -0.6 0 43 10.09 Yes 30 1.41 Yes 0 0 No -42 0.75 Yes 28 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85872936 + NR_046347 USP39 1 1.11 1.75 56 7.17 80.59 22 7.07 Yes 9 1.06 Yes 21 0.73 Yes -21 0.42 No 33 51.96 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 49323753 - NM_199443 USP4 1 0.52 0.64 30 -9.56 0 16 3.87 No 47 -2.67 No 0 0 No -35 0.4 No 35 71.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 49331101 - NM_199443 USP4 1 3.22 5.51 71 5.12 81.44 34 7.41 Yes 21 1.12 Yes 25 0.58 Yes -33 0.89 Yes 37 92.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 49333076 - NM_199443 USP4 1 0.92 1.43 46 11.59 83.41 22 5.17 No 9 0.62 No 0 0 No -25 0.64 No 45 63.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 49336345 - NM_199443 USP4 1 0.09 0.11 7 1.15 77.23 21 6.1 Yes 68 0.02 No 0 0 No -26 0.84 Yes 44 82.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49336348 - NM_199443 USP4 1 0.11 0.18 10 4.35 81.69 18 5.87 Yes 65 0.01 No 0 0 No -23 0.78 Yes 47 82.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49339897 - NM_199443 USP4 1 0.75 1.11 43 8.54 79.7 25 5.29 No 42 0.54 No 0 0 No -24 0.94 Yes 46 92.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49339934 - NM_199443 USP4 1 0.3 0.44 24 3.5 82.78 39 6.39 Yes 51 1.16 Yes 0 0 No -31 0.65 No 39 75.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 49343279 - NM_199443 USP4 1 0.07 0.13 8 3.47 76.73 20 4.97 No 7 1.85 Yes 0 0 No -19 0.78 Yes 51 66.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 49349088 - NM_199443 USP4 1 311.24 106.57 72 12.13 88.17 31 5.83 Yes 45 0.06 No 30 0.79 Yes -24 0.67 Yes 43 79.4 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 49350047 - NM_199443 USP4 1 0.53 0.17 12 2.84 0 31 7.87 Yes 18 1.49 Yes 30 0.89 Yes -30 0.93 Yes 40 94.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 49353633 - NM_199443 USP4 1 0.81 0.26 15 9.6 86.87 29 4.38 No 11 0.23 No 0 0 No -23 0.72 Yes 47 80.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49354912 - NM_199443 USP4 1 8.47 2.93 67 -0.51 43.59 27 6.08 Yes 14 0.34 No 26 0.67 Yes -30 0.27 No 51 30.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 49355785 - NM_199443 USP4 1 0.72 0.21 12 6.49 87.73 23 4.74 No 16 0.43 No 0 0 No -22 0.84 Yes 48 84.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 49355850 - NM_199443 USP4 1 1.04 0.35 16 -1.97 0 13 4.35 No 23 1.13 Yes 0 0 No -58 0.47 No 12 61.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49355860 - NM_199443 USP4 1 0.31 0.13 7 -2.76 0 12 4.24 No 13 1.12 Yes 0 0 No -48 0.55 No 22 69.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 49355869 - NM_199443 USP4 1 0.46 0.18 11 -4.44 72.78 17 5.99 Yes 4 1.14 Yes 0 0 No -39 0.56 No 31 83.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 49360925 - NM_199443 USP4 1 0.5 0.18 10 3.74 0 21 4.58 No 36 1.22 Yes 0 0 No -20 0.83 Yes 50 94.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49361160 - NM_199443 USP4 1 0.51 0.21 12 10.2 91.89 32 7.14 Yes 19 1.03 Yes 0 0 No -31 0.7 Yes 39 74.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49369703 - NM_199443 USP4 1 0.07 0.14 8 0.67 0 41 8.47 Yes 28 1.03 Yes 0 0 No -34 0.64 No 36 56.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49372541 - NM_199443 USP4 1 1.99 4.08 70 8.56 88.54 30 4.64 No 72 -2.71 No 0 0 No -29 0.49 No 44 31.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 234386167 - NM_018218 USP40 1 0.32 0.14 9 -1.82 0 13 4.32 No 32 0.64 No 21 0.78 Yes -30 0.65 No 40 56.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 234396653 - NM_018218 USP40 1 2.19 0.51 23 1.77 0 20 4.36 No 51 0.4 No 30 0.54 Yes -19 0.59 No 39 32.47 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 234396663 - NM_018218 USP40 1 3.42 0.89 38 0.36 80.34 21 4.8 No -3 0.4 No 30 0.54 Yes -21 0.58 No 49 77.15 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 234399718 - NM_018218 USP40 1 0.65 0.22 14 8.79 82.01 36 7.06 Yes 23 0.98 Yes 35 0.77 Yes -35 0.83 Yes 35 89.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 234401710 - NM_018218 USP40 1 0.37 0.14 10 4.22 73 16 6.09 Yes 3 1.08 Yes 0 0 No -26 0.69 Yes 44 86.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234404720 - NM_018218 USP40 1 0.32 0.14 10 9.37 92.28 24 6.08 Yes 74 0.83 Yes 0 0 No -23 0.89 Yes 47 89.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234407271 - NM_018218 USP40 1 7.77 3.03 66 -0.16 0 29 7.49 Yes 16 1.23 Yes 24 0.72 Yes -28 0.67 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 234415530 - NM_018218 USP40 1 0.36 0.13 9 5.73 89.33 25 5.04 No 36 1.45 Yes 0 0 No -24 0.65 No 46 77.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 234417678 - NM_018218 USP40 1 0.78 0.17 11 5.84 75.61 21 5.74 Yes 14 -2.44 No 0 0 No -21 0.56 No 50 50.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 234421326 - NM_018218 USP40 1 0.46 0.15 9 6.35 80.72 28 5.57 Yes 15 1.74 Yes 0 0 No -28 0.81 Yes 42 72.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234432069 - NM_018218 USP40 1 0.46 0.18 12 7.04 83.81 37 8.09 Yes 24 1.04 Yes 0 0 No -36 0.78 Yes 34 78.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 234438317 - NM_018218 USP40 1 3.06 1.06 45 10.95 94.18 18 7.05 Yes 5 1.91 Yes 0 0 No -27 0.52 No 36 61.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 234451191 - NM_018218 USP40 1 2.31 0.56 32 10.01 86.24 22 7.18 Yes 72 0 No 0 0 No -21 0.88 Yes 49 92.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 234463169 - NM_018218 USP40 1 0.25 0.11 7 -4.61 0 42 7.83 Yes 29 0.9 Yes 0 0 No -29 0.73 Yes 41 63.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 234469913 - NM_018218 USP40 1 0.22 0.11 8 8.72 86.35 22 5.29 No 17 1.38 Yes 0 0 No -21 0.64 No 49 82.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 234471447 - NM_018218 USP40 1 0.35 0.19 12 4.46 81.31 23 9.42 Yes 10 1.63 Yes 0 0 No -22 0.66 No 35 61.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6155282 + NM_032172 USP42 1 1.37 0.43 23 4.62 86.12 23 4.88 No 75 2.72 Yes 0 0 No -22 0.7 Yes 48 83.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6156425 + NM_032172 USP42 1 0.79 0.26 18 10.06 83.87 36 6.97 Yes 23 1.84 Yes 35 0.83 Yes -35 0.94 Yes 35 94.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 6156446 + NM_032172 USP42 1 0.88 0.31 18 8.61 87.38 16 5.42 No 44 1.81 Yes 0 0 No -23 0.59 No 47 91.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6161121 + NM_032172 USP42 1 3.31 1.08 43 7.78 79.98 32 6.54 Yes 19 1.28 Yes 0 0 No -34 0.89 Yes 36 94.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6167768 + NM_032172 USP42 1 1.43 0.42 22 8.86 86.81 25 5.55 No 20 1.38 Yes 24 0.85 Yes -24 0.78 Yes 46 84.73 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 6169838 + NM_032172 USP42 1 1.82 0.58 30 7.54 73.5 14 5.46 No 1 2.03 Yes 0 0 No -24 0.68 Yes 52 68.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6192587 + NM_032172 USP42 1 1.05 0.42 24 6.62 84.84 21 5.64 Yes 8 0.28 No 0 0 No -20 0.75 Yes 47 81.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 99884424 - NM_001346021 USP45 1 0.99 0.17 10 -7.15 71.84 33 8.94 Yes 20 1.9 Yes 0 0 No -32 0.77 Yes 38 95.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 99885833 - NM_001346021 USP45 1 1.92 0.35 20 6.08 77.03 22 4.29 No 9 0.43 No 0 0 No -24 0.58 No 46 54.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99894227 - NM_001346021 USP45 1 4.05 1.6 45 3.48 79.12 27 6.4 Yes -1 0.01 No 0 0 No -26 0.74 Yes 44 49.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 99895173 - NM_001346021 USP45 1 0.4 0.15 10 7.32 86.86 40 5.58 Yes -3 1.43 Yes 0 0 No -39 0.95 Yes 31 97.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 99905319 - NM_001346021 USP45 1 0.65 0.32 18 7.04 79.63 29 5.57 Yes 16 0.64 No 0 0 No -28 0.96 Yes 42 98.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 99907175 - NM_001346021 USP45 1 1.32 0.64 29 8.47 93.31 19 5 No 76 -4.92 No 0 0 No -22 0.31 No 51 37.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99910692 - NM_001346021 USP45 1 2.73 1.28 44 7.44 86.34 21 8 Yes 8 1.25 Yes 20 0.78 Yes -20 0.89 Yes 50 93.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 99916047 - NM_001346021 USP45 1 11.91 3.21 69 6.39 74.69 40 5.69 Yes 27 0.5 No 24 0.71 Yes -27 0.62 No 43 71.28 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 99919256 - NM_001346021 USP45 1 0.48 0.24 13 6.18 81.08 35 6.7 Yes 68 0.69 No 0 0 No -34 0.49 No 43 51.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99927779 - NM_001346021 USP45 1 0.92 0.46 24 5.8 83.49 68 8.49 Yes 6 0.66 No 0 0 No -39 0.59 No 34 57.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 99930692 - NM_001346021 USP45 1 0.16 0.11 7 10.13 88.42 30 5.57 Yes 17 2.56 Yes 0 0 No -29 0.68 Yes 41 75.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 99932507 - NM_001346021 USP45 1 0.21 0.11 7 9.79 94.48 22 7.26 Yes 9 1.05 Yes 0 0 No -21 0.82 Yes 49 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 99936684 - NM_001346021 USP45 1 0.37 0.19 11 3.58 73.2 22 4.69 No 9 1.13 Yes 0 0 No -21 0.74 Yes 49 85.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 99949886 - NM_001346021 USP45 1 0.17 0.1 7 7.02 88.48 26 6.63 Yes 41 0.95 Yes 25 0.89 Yes -25 0.92 Yes 45 91.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 99956656 - NM_001346021 USP45 1 4.02 1.31 50 6.33 80.94 27 5.74 Yes 71 0.43 No 0 0 No -26 0.81 Yes 44 79.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 53475878 - NM_001134223 USP46 1 0.35 0.14 8 5.95 83.38 35 6.69 Yes 13 0.48 No 0 0 No -25 0.71 Yes 45 66.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 53494191 - NM_001134223 USP46 1 0.23 0.13 8 6.79 82.2 27 6.86 Yes 14 1.37 Yes 0 0 No -26 0.81 Yes 44 92.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 53494295 - NM_001134223 USP46 1 0.87 0.43 22 5.26 84.31 15 6.71 Yes 2 1.55 Yes 0 0 No -20 0.66 Yes 50 56.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 53495853 - NM_001134223 USP46 1 1.07 0.54 29 10.68 92.81 26 7.42 Yes 13 1.27 Yes 25 0.69 Yes -25 0.64 No 45 50.82 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 11931664 + NM_001330208 USP47 1 0.42 0.58 28 7.33 93.77 25 5.17 No 58 0.86 Yes 0 0 No -24 0.45 No 46 49.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 11941857 + NM_001330208 USP47 1 0.18 0.22 13 4.45 72.94 19 5 No 11 0.23 No 36 0.6 Yes -23 0.83 Yes 47 69.86 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 11944282 + NM_001330208 USP47 1 0.13 0.11 7 2.93 0 15 3.47 No 53 0.57 No 0 0 No -18 0.78 Yes 52 65.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 11957925 + NM_001330208 USP47 1 0.14 0.15 10 5.1 72.41 22 4.81 No 43 0.27 No 0 0 No -21 0.44 No 43 45.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 11959806 + NM_001330208 USP47 1 2.31 2.43 63 -5.73 51.89 41 9.01 Yes 28 1.53 Yes 0 0 No -40 0.59 No 30 63.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 11970656 + NM_001330208 USP47 1 0.11 0.13 8 9.17 82.89 36 5.92 Yes 3 0.3 No 0 0 No -29 0.46 No 42 60.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 11974293 + NM_001330208 USP47 1 0.15 0.14 9 -3.2 0 9 3.87 No 11 0.64 No 0 0 No -28 0.62 No 42 69.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 22005415 - NM_032236 USP48 1 0.14 0.22 15 3.09 72.75 50 6.96 Yes 29 1.17 Yes 0 0 No -24 0.53 No 46 62.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 22030881 - NM_032236 USP48 1 1.67 3 68 1.07 0 34 5.43 No 59 1.26 Yes 0 0 No -34 0.91 Yes 36 91.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 22032334 - NM_032236 USP48 1 0.1 0.19 12 -0.32 77.24 35 6.16 Yes 22 0.52 No 28 0.68 Yes -34 0.57 No 36 57.25 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 22032370 - NM_032236 USP48 1 0.97 2.06 60 7.1 86.59 33 7.78 Yes 54 1.29 Yes 28 0.68 Yes -29 0.3 No 38 51 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 22033401 - NM_032236 USP48 1 0.23 0.32 21 4.35 88.38 13 4.08 No 0 1.22 Yes 24 0.43 Yes -24 0.42 No 52 45.16 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 22043894 - NM_032236 USP48 1 0.82 0.9 41 9.03 87.44 87 10.64 Yes 74 0.1 No 0 0 No -39 0.85 Yes 31 83.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 22047657 - NM_032236 USP48 1 19.8 24.18 72 5.02 79.76 24 6.75 Yes 11 0.8 Yes 30 0.87 Yes -33 0.85 Yes 37 85.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 22053130 - NM_032236 USP48 1 0.23 0.47 26 6.61 88.6 34 5.81 Yes 21 0.68 No 0 0 No -30 0.52 No 37 66.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 22056323 - NM_032236 USP48 1 13.29 27.43 72 7.28 85.96 31 3.74 No 6 0.41 No 27 0.58 Yes -30 0.72 Yes 40 78.52 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 22056323 - NM_032236 USP48 1 0.18 0.38 22 7.28 85.96 31 3.74 No 6 0.41 No 27 0.58 Yes -30 0.72 Yes 40 78.52 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 22056920 - NM_032236 USP48 1 0.19 0.4 25 0.52 0 24 6.28 Yes 11 0.92 Yes 0 0 No -38 0.31 No 42 41.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 22059903 - NM_032236 USP48 1 0.11 0.22 13 3.04 0 43 8.55 Yes 75 0.76 No 0 0 No -42 0.74 Yes 28 82.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 22072046 - NM_032236 USP48 1 0.07 0.18 12 2.06 0 44 6.54 Yes 31 0.62 No 0 0 No -43 0.57 No 35 54.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 22073659 - NM_032236 USP48 1 0.06 0.15 10 1.41 62.12 42 5.6 Yes 14 0.36 No 21 0.76 Yes -41 0.33 No 29 66.47 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 22074761 - NM_032236 USP48 1 0.08 0.22 12 -4.87 0 59 6 Yes 36 0.56 No 0 0 No -25 0.54 No 39 35.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 22075377 - NM_032236 USP48 1 1 2.08 61 6.58 94.08 26 5.1 No 54 0.44 No 0 0 No -25 0.8 Yes 45 76.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 22082174 - NM_032236 USP48 1 0.04 0.11 8 11.3 94.39 23 5.74 Yes 10 0.96 Yes 0 0 No -26 0.5 No 48 77.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 22083457 - NM_032236 USP48 1 1.24 2.75 65 8.62 80.39 17 5.48 No 65 -3.15 No 0 0 No -23 0.39 No 47 45.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 22103604 - NM_032236 USP48 1 0.77 0.92 40 11.75 95.65 30 7.75 Yes 17 1.09 Yes 0 0 No -29 0.93 Yes 41 95.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 41783888 - NM_001286554 USP49 1 1.16 0.19 12 12.41 83.07 40 7.21 Yes 50 -1.31 No 0 0 No -38 0.34 No 36 41.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 41808745 - NM_001286554 USP49 1 2.75 0.53 29 4.15 77.64 43 6.78 Yes 30 0.47 No 0 0 No -42 0.54 No 28 67.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6967591 + NM_003481 USP5 1 0.16 0.31 19 1.43 0 25 5.17 No 12 0.83 Yes 0 0 No -24 0.67 Yes 46 54.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 6969533 + NM_003481 USP5 1 0.08 0.1 7 -1.81 0 29 4.56 No 16 1.05 Yes 0 0 No -28 0.8 Yes 42 89.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6970118 + NM_003481 USP5 1 0.26 0.36 21 -1.77 83.63 23 6.02 Yes 66 2.16 Yes 0 0 No -35 0.49 No 48 58.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6970170 + NM_003481 USP5 1 0.28 0.44 24 -1.12 78.05 27 5.3 No 14 1.09 Yes 24 0.51 Yes -26 0.89 Yes 44 93.86 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 6971438 + NM_003481 USP5 1 0.28 0.58 31 7.76 92.54 47 7.03 Yes 43 -0.61 No 0 0 No -39 0.52 No 39 53.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6972308 + NM_003481 USP5 1 1.23 2.31 63 7.84 83.72 23 5.38 No 44 -3.08 No 22 0.83 Yes -22 0.94 Yes 48 87.64 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 6973247 + NM_003481 USP5 1 0.09 0.15 11 6.06 70.42 18 6.52 Yes 41 -0.39 No 0 0 No -27 0.61 No 43 33.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 75294529 - NM_001320437 USP54 1 58.9 2.32 60 11.62 88.62 34 9.19 Yes 21 1.27 Yes 33 0.9 Yes -33 0.91 Yes 37 93.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 75301490 - NM_001320437 USP54 1 0.93 0.11 8 -4.44 0 11 3.91 No 39 0.89 Yes 31 0.17 Yes -34 0.37 No 23 57.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 75301728 - NM_001320437 USP54 1 3.27 0.38 20 9.74 82.35 47 7.33 Yes 34 1.22 Yes 0 0 No -46 0.46 No 17 54.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 75305369 - NM_001320437 USP54 1 2.64 0.15 9 8.89 75.56 14 5.42 No 65 2.17 Yes 0 0 No -31 0.5 No 39 64.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 11531950 - NM_001080491 USP6NL 1 1.11 0.76 31 11.99 92.08 18 5.36 No 5 0.94 Yes 0 0 No -22 0.65 No 53 82.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 11531970 - NM_001080491 USP6NL 1 0.17 0.13 7 4.22 73.12 25 4.27 No 20 -1.5 No 0 0 No -24 0.69 Yes 46 82.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 11532668 - NM_001080491 USP6NL 1 0.35 0.15 10 6.19 71.08 21 5.61 Yes 14 -2.78 No 0 0 No -25 0.64 No 45 72.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 11535227 - NM_001080491 USP6NL 1 0.12 0.13 8 -7.4 0 44 7.31 Yes 31 0.64 No 0 0 No -43 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 11537230 - NM_001080491 USP6NL 1 2.87 2.54 59 3.84 68.89 27 6.04 Yes 14 0.9 Yes 0 0 No -30 0.62 No 40 52.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 11564978 - NM_001080491 USP6NL 1 0.15 0.17 10 11.81 87.14 25 6 Yes 50 1.08 Yes 0 0 No -25 0.37 No 48 78.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 8988497 - NR_135826 USP7 1 0.06 0.22 12 -8.21 0 32 5.51 No 19 1.03 Yes 0 0 No -31 0.75 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 8992491 - NR_135826 USP7 1 0.22 0.79 38 1.94 0 16 3.87 No 56 1.18 Yes 0 0 No -31 0.73 Yes 39 63.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 9003413 - NR_135826 USP7 1 0.09 0.26 18 8.62 77.36 36 6.16 Yes 23 1.1 Yes 0 0 No -35 0.72 Yes 44 72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 9004683 - NR_135826 USP7 1 0.09 0.31 17 -26.77 0 27 6.24 Yes 14 1.08 Yes 0 0 No -26 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 9004715 - NR_135826 USP7 1 0.21 0.83 40 -4.41 0 14 3.85 No 28 0.94 Yes 24 0.77 Yes -36 0.7 Yes 34 49.91 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 9009801 - NR_135826 USP7 1 0.32 1.38 49 10.81 92.41 23 5.39 No 70 -3.6 No 0 0 No -23 0.5 No 45 63.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 9009891 - NR_135826 USP7 1 0.02 0.11 8 5.56 85.37 28 5.25 No -2 0.99 Yes 0 0 No -27 0.83 Yes 43 81.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 9023401 - NR_135826 USP7 1 2.76 5.36 71 6.83 92.06 23 5.01 No 10 0.63 No 22 0.96 Yes -22 0.95 Yes 48 97.53 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 50724534 + NM_001128610 USP8 1 21.39 5.24 72 9.35 85.1 90 9.73 Yes 59 0.76 No 28 0.64 Yes -31 0.48 No 42 72.15 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 50733557 + NM_001128610 USP8 1 0.2 0.24 9 3.53 0 21 4.58 No 59 1.18 Yes 0 0 No -20 0.55 No 31 65.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 50736767 + NM_001128610 USP8 1 0.33 0.33 20 7.44 92.73 19 5 No 35 -2.08 No 26 0.53 Yes -23 0.47 No 47 54.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 50744762 + NM_001128610 USP8 1 1.34 1.69 51 9.47 84.6 19 5.57 Yes 6 1.76 Yes 0 0 No -18 0.71 Yes 52 75.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 50746669 + NM_001128610 USP8 1 0.38 0.51 26 12.59 95.65 29 6.71 Yes 47 0.81 Yes 0 0 No -28 0.7 Yes 42 75.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 50757246 + NM_001128610 USP8 1 0.31 0.44 24 -14.62 63.03 27 7.05 Yes 14 1.04 Yes 0 0 No -26 0.96 Yes 44 96.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 50765715 + NM_001128610 USP8 1 0.15 0.11 7 6.13 83.64 54 7.85 Yes 41 1.31 Yes 0 0 No -23 0.55 No 47 51.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 50780599 + NM_001128610 USP8 1 0.32 0.25 14 7.24 86.24 23 5.78 Yes 43 0.68 No 0 0 No -26 0.51 No 44 71.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 50780599 + NM_001128610 USP8 1 0.66 0.46 24 7.24 86.24 23 5.78 Yes 43 0.68 No 0 0 No -26 0.51 No 44 71.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 50788167 + NM_001128610 USP8 1 0.17 0.17 10 9.65 92.28 31 4.6 No 14 0.62 No 0 0 No -30 0.73 Yes 40 72.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 40946869 + NM_001039590 USP9X 1 2.34 2.71 62 6.75 89.58 31 8.66 Yes 18 1.61 Yes 0 0 No -30 0.62 No 40 73.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 40953474 + NM_001039590 USP9X 1 0.64 0.76 35 5.41 90.92 28 5 No 48 0.85 Yes 0 0 No -27 0.52 No 15 47.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 40973921 + NM_001039590 USP9X 1 0.09 0.11 7 7.01 78.13 24 6.74 Yes 11 1.34 Yes 0 0 No -23 0.85 Yes 47 90.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 40994055 + NM_001039590 USP9X 1 0.09 0.14 7 6.38 80.21 29 7.58 Yes 16 1.06 Yes 0 0 No -28 0.82 Yes 42 93.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 41005558 + NM_001039590 USP9X 1 0.19 0.35 19 5.98 84.42 21 4.9 No 69 1.08 Yes 0 0 No -20 0.86 Yes 50 88.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 41012185 + NM_001039590 USP9X 1 0.27 0.44 26 2.58 69.16 15 4.59 No 11 -2.69 No 29 0.47 Yes -22 0.82 Yes 48 82.94 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 41012185 + NM_001039590 USP9X 1 37.78 62.26 72 2.58 69.16 15 4.59 No 11 -2.69 No 29 0.47 Yes -22 0.82 Yes 48 82.94 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 41029279 + NM_001039590 USP9X 1 0.05 0.11 7 6.72 79.4 19 6.24 Yes 46 1.18 Yes 0 0 No -29 0.36 No 52 43.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 41033454 + NM_001039590 USP9X 1 0.06 0.13 8 4.6 77.72 30 5.45 No 1 0.06 No 0 0 No -29 0.52 No 49 53.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 41043355 + NM_001039590 USP9X 1 0.08 0.17 10 7.57 88.17 21 5.22 No 8 1.54 Yes 0 0 No -24 0.79 Yes 46 80.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 41043788 + NM_001039590 USP9X 1 0.05 0.11 7 5.15 74.42 29 5.53 No 16 1.45 Yes 0 0 No -28 0.9 Yes 42 94.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 41047220 + NM_001039590 USP9X 1 0.23 0.31 18 8.63 80.29 50 7.13 Yes 60 1.18 Yes 29 0.61 Yes -30 0.61 No 40 74.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chrX 41056517 + NM_001039590 USP9X 1 0.07 0.15 8 8.62 86.28 13 3.69 No 0 0.76 No 0 0 No -26 0.93 Yes 44 94.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 41057828 + NM_001039590 USP9X 1 0.08 0.13 7 6.97 84.7 43 5.62 Yes 64 1.16 Yes 0 0 No -30 0.5 No 40 62.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 41057828 + NM_001039590 USP9X 1 0.23 0.38 20 6.97 84.7 43 5.62 Yes 64 1.16 Yes 0 0 No -30 0.5 No 40 62.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 41064905 + NM_001039590 USP9X 1 0.13 0.25 15 13 92.63 30 7.95 Yes 17 0.54 No 0 0 No -29 0.67 Yes 41 87.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 41082535 + NM_001039590 USP9X 1 0.14 0.24 14 9.83 78.64 41 3.98 No 71 1.08 Yes 0 0 No -22 0.49 No 48 61.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 31193815 + NM_001321533 USPL1 1 6.13 0.68 37 5.88 77.02 36 6.84 Yes 23 1.36 Yes 0 0 No -25 0.53 No 45 49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 31216062 + NM_001321533 USPL1 1 1.86 1.31 52 10.38 88.27 21 6.63 Yes 70 1.61 Yes 0 0 No -23 0.57 No 47 60.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 31231614 + NM_001321533 USPL1 1 0.52 0.28 19 -0.71 0 31 7.78 Yes 18 1.87 Yes 0 0 No -30 0.91 Yes 40 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 38485800 + NM_016037 UTP11 1 0.3 0.53 23 2.87 0 38 6.14 Yes 58 -3.47 No 0 0 No -37 0.46 No 33 70.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 129046554 + NM_006649 UTP14A 1 0.73 0.96 43 4.36 79.75 21 4.89 No 48 1.39 Yes 0 0 No -21 0.56 No 50 25.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 129047285 + NM_006649 UTP14A 1 0.34 0.49 23 10.1 87.91 25 4.32 No 24 1.63 Yes 36 0.13 Yes -23 0.66 Yes 46 70.69 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 129059873 + NM_006649 UTP14A 1 0.59 0.89 35 -10.3 0 14 3.87 No 76 0.43 No 23 0.86 Yes -16 0.43 No 62 38.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 129059898 + NM_006649 UTP14A 1 0.12 0.15 9 -1.11 0 34 5.68 Yes 40 -0.79 No 0 0 No -27 0.86 Yes 43 92.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 72861881 + NM_032175 UTP15 1 0.37 0.35 20 2.42 69.97 19 4.9 No 14 0.93 Yes 0 0 No -26 0.74 Yes 44 61.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 72861892 + NM_032175 UTP15 1 0.16 0.17 11 1.21 0 14 3.53 No 25 0.92 Yes 0 0 No -18 0.49 No 52 33.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 72864116 + NM_032175 UTP15 1 0.45 0.51 27 2.14 87.77 23 4.78 No 68 1.29 Yes 22 0.9 Yes -22 0.68 Yes 48 64.16 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr5 72865326 + NM_032175 UTP15 1 0.24 0.29 15 0.95 0 46 7.64 Yes 9 2.2 Yes 0 0 No -29 0.26 No 41 44.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 72868316 + NM_032175 UTP15 1 0.13 0.17 8 -7.42 84.9 24 6.63 Yes 11 1.31 Yes 0 0 No -23 0.76 Yes 47 81.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 72875703 + NM_032175 UTP15 1 0.11 0.14 9 -7.72 0 28 6.24 Yes 15 1.23 Yes 0 0 No -27 0.5 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 49345340 + NM_016001 UTP18 1 0.05 0.13 8 12.74 92.04 27 7.67 Yes 45 0.51 No 0 0 No -26 0.65 No 44 64.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 49345570 + NM_016001 UTP18 1 0.59 1.29 48 5.12 85.02 19 5.48 No 6 1.12 Yes 0 0 No -18 0.62 No 52 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 49345573 + NM_016001 UTP18 1 0.05 0.1 7 4.02 80.12 22 5.74 Yes 9 1.09 Yes 0 0 No -21 0.81 Yes 49 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 49350993 + NM_016001 UTP18 1 0.16 0.29 15 3.94 56.88 44 8.91 Yes 31 0.82 Yes 0 0 No -43 0.93 Yes 27 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 49359709 + NM_016001 UTP18 1 0.19 0.24 13 8.96 84.89 31 4.35 No 12 1.02 Yes 0 0 No -31 0.39 No 46 59.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 49363843 + NM_016001 UTP18 1 0.46 1 39 12.88 94.01 16 6.66 Yes 3 1.28 Yes 38 0.63 Yes -38 0.58 No 32 83.08 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 49365484 + NM_016001 UTP18 1 0.9 2.08 50 6.2 79.47 26 3.67 No 13 -1.36 No 25 0.52 Yes -17 0.4 No 42 47.68 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 49365908 + NM_016001 UTP18 1 0.22 0.61 30 7.72 84.99 32 6.56 Yes 3 0.8 Yes 31 0.88 Yes -31 0.89 Yes 39 86.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 49371243 + NM_016001 UTP18 1 0.08 0.24 10 2.68 71.89 26 4.99 No 66 0.32 No 24 0.68 Yes -21 0.57 No 52 39.68 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 101676100 + NM_014503 UTP20 1 0.25 0.22 15 7.06 91.23 24 5.57 Yes 59 1.84 Yes 0 0 No -23 0.78 Yes 47 91.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 101727060 + NM_014503 UTP20 1 0.3 0.28 14 5.37 87.99 24 6.22 Yes 49 0.26 No 23 0.73 Yes -19 0.5 No 51 34.19 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 101737474 + NM_014503 UTP20 1 0.13 0.11 7 4.71 76.34 19 7.07 Yes 6 0.93 Yes 0 0 No -27 0.5 No 52 53.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 101748582 + NM_014503 UTP20 1 0.26 0.28 17 7.31 87.49 35 6.21 Yes 70 0.81 Yes 24 0.82 Yes -34 0.71 Yes 36 83.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 101770449 + NM_014503 UTP20 1 0.19 0.15 9 2.43 0 47 7.57 Yes 29 0.41 No 0 0 No -41 0.85 Yes 29 77.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 69167414 + NM_032830 UTP4 1 7.97 6.61 69 7.4 89.82 16 5.63 Yes 62 1.49 Yes 32 0.47 Yes -26 0.54 No 37 67.72 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 69170581 + NM_032830 UTP4 1 0.38 0.82 37 -3.7 56.86 26 6.67 Yes -1 0.36 No 25 0.78 Yes -25 0.81 Yes 45 59.5 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 69188277 + NM_032830 UTP4 1 0.07 0.21 13 -2.76 0 17 3.53 No 42 1.19 Yes 20 0.94 Yes -32 0.52 No 38 39.86 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 69191025 + NM_032830 UTP4 1 0.06 0.18 12 10.19 85.47 33 5.65 Yes 56 1.34 Yes 0 0 No -25 0.83 Yes 45 72.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 69194264 + NM_032830 UTP4 1 1.13 2.4 58 -1.9 0 11 3.87 No 12 1.32 Yes 0 0 No -24 0.62 No 46 69.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69201035 + NM_032830 UTP4 1 0.04 0.11 7 1.76 58.93 36 7.48 Yes 33 0.36 No 0 0 No -35 0.76 Yes 35 83.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 30193735 - NM_018428 UTP6 1 2.99 6 71 10.62 88.27 22 7.28 Yes 9 1.48 Yes 21 0.84 Yes -21 0.92 Yes 49 94.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 30193735 - NM_018428 UTP6 1 0.09 0.14 9 10.62 88.27 22 7.28 Yes 9 1.48 Yes 21 0.84 Yes -21 0.92 Yes 49 94.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 30200506 - NM_018428 UTP6 1 0.11 0.15 9 -15.79 0 36 6.16 Yes 23 1.24 Yes 0 0 No -35 0.94 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 30202833 - NM_018428 UTP6 1 0.09 0.17 10 2.78 0 36 6.79 Yes 23 1.16 Yes 0 0 No -35 0.95 Yes 35 96.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30206684 - NM_018428 UTP6 1 0.08 0.13 7 3.74 0 27 7.29 Yes 38 1.12 Yes 0 0 No -27 0.51 No 36 32.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 30212058 - NM_018428 UTP6 1 0.09 0.17 10 3.51 0 33 6.93 Yes 20 1.07 Yes 32 0.92 Yes -32 0.96 Yes 38 95.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 30213078 - NM_018428 UTP6 1 0.87 1.39 52 -10.15 68.14 20 4 No 58 0.71 No 0 0 No -26 0.57 No 44 68.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 30214325 - NM_018428 UTP6 1 0.12 0.24 16 4.2 0 15 4.12 No 70 0.46 No 0 0 No -28 0.83 Yes 42 83.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 30222029 - NM_018428 UTP6 1 0.05 0.13 9 -32.44 0 30 6.63 Yes 17 0.79 Yes 0 0 No -29 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 30226308 - NM_018428 UTP6 1 0.17 0.36 16 1.95 0 29 4.64 No 13 0.71 No 0 0 No -28 0.64 No 42 81.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 30226312 - NM_018428 UTP6 1 0.22 0.43 24 0.84 86.92 25 4.46 No 9 0.74 No 0 0 No -24 0.6 No 46 79.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 144779908 + NM_007124 UTRN 1 3.74 1.94 60 1.65 72.57 42 6.48 Yes 29 0.47 No 0 0 No -41 0.35 No 29 69.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 144809812 + NM_007124 UTRN 1 0.57 0.38 20 2.61 0 30 8.66 Yes 17 1.17 Yes 0 0 No -29 0.85 Yes 41 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 144830774 + NM_007124 UTRN 1 0.24 0.14 7 10.75 87.75 31 6.68 Yes 18 1.71 Yes 0 0 No -33 0.65 No 37 49.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 144832056 + NM_007124 UTRN 1 0.24 0.11 7 -5.08 0 14 4.36 No 73 0.07 No 29 0.28 Yes -42 0.44 No 24 44.75 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 144839374 + NM_007124 UTRN 1 0.58 0.31 17 10.43 86.6 33 5.83 Yes 20 1.24 Yes 0 0 No -32 0.73 Yes 38 86.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 144868625 + NM_007124 UTRN 1 0.83 0.35 16 11.22 90.06 24 7.07 Yes 11 1.31 Yes 0 0 No -23 0.43 No 47 70.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 144908816 + NM_007124 UTRN 1 0.31 0.18 11 9.63 96.16 28 5.93 Yes 15 1.03 Yes 0 0 No -27 0.51 No 43 57.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 144911016 + NM_007124 UTRN 1 0.52 0.26 17 4.6 0 32 6 Yes 19 2.07 Yes 0 0 No -31 0.68 Yes 39 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 145041253 + NM_007124 UTRN 1 0.38 0.14 9 6.66 80.18 24 5.48 No 11 0.14 No 0 0 No -23 0.88 Yes 47 91.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 145124177 + NM_007124 UTRN 1 0.39 0.15 8 -1.23 0 9 3.87 No 16 0.68 No 0 0 No -41 0.32 No 39 44.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 145131271 + NM_007124 UTRN 1 0.6 0.24 14 11.3 87.86 31 6.08 Yes 18 0.44 No 0 0 No -30 0.85 Yes 40 94.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 145131296 + NM_007124 UTRN 1 0.64 0.14 10 9.87 96.67 24 5.15 No 43 0.42 No 0 0 No -23 0.52 No 47 69.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 145160359 + NM_007124 UTRN 1 1.31 0.44 22 4.83 78.35 42 7.55 Yes 35 1.09 Yes 0 0 No -30 0.57 No 40 57.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75536177 + NM_003369 UVRAG 1 0.16 0.13 7 3.42 0 36 4.75 No 14 1.32 Yes 0 0 No -26 0.57 No 44 58.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75570633 + NM_003369 UVRAG 1 0.41 0.58 26 8.75 90.81 21 5.99 Yes 17 -1.94 No 0 0 No -20 0.82 Yes 50 68.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 75581959 + NM_003369 UVRAG 1 0.09 0.15 8 5.41 90.92 28 5.25 No 65 0.96 Yes 0 0 No -27 0.78 Yes 43 59.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 75583453 + NM_003369 UVRAG 1 0.24 0.38 20 10.5 88.27 27 5.38 No 14 1.87 Yes 0 0 No -26 0.88 Yes 44 92.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75603172 + NM_003369 UVRAG 1 4.9 4.67 70 8.5 88.21 24 4.9 No 41 1.21 Yes 0 0 No -23 0.37 No 48 34.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75610390 + NM_003369 UVRAG 1 0.82 0.75 40 10.78 94.9 57 4.8 No 62 0.31 No 0 0 No -38 0.76 Yes 32 51.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 75663803 + NM_003369 UVRAG 1 0.74 1.04 42 8.27 85.29 29 8.44 Yes 58 1.82 Yes 0 0 No -28 0.56 No 42 64.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75664989 + NM_003369 UVRAG 1 0.38 0.53 29 9.58 87.15 23 7.9 Yes 34 1.45 Yes 0 0 No -25 0.85 Yes 45 80.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75690821 + NM_003369 UVRAG 1 2.66 2.85 62 7.75 83.72 29 6.13 Yes 16 1.55 Yes 0 0 No -28 0.73 Yes 42 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75694431 + NM_003369 UVRAG 1 0.66 0.78 35 -11.4 0 32 5.77 Yes 31 0.79 Yes 0 0 No -31 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 75694432 + NM_003369 UVRAG 1 0.11 0.13 8 -11.25 0 33 5.82 Yes 32 0.78 Yes 0 0 No -32 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 75718579 + NM_003369 UVRAG 1 0.18 0.22 10 2.18 79.37 31 5.65 Yes 15 0.59 No 0 0 No -30 0.69 Yes 40 75.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 75718622 + NM_003369 UVRAG 1 0.23 0.31 19 3.08 82.98 26 4.93 No 58 0.57 No 0 0 No -25 0.6 No 45 81.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 75723970 + NM_003369 UVRAG 1 1.2 1.92 59 7.19 89.87 41 6.4 Yes 52 0.76 No 34 0.17 Yes -28 0.54 No 36 53.63 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 75729263 + NM_003369 UVRAG 1 0.32 0.49 25 9.56 92.67 42 7.19 Yes 45 1.12 Yes 0 0 No -24 0.57 No 35 45.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75734902 + NM_003369 UVRAG 1 0.31 0.44 23 10.44 88.27 29 5.63 Yes 50 1.25 Yes 0 0 No -28 0.89 Yes 42 88.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75741261 + NM_003369 UVRAG 1 0.18 0.26 15 8.03 87.82 30 6.59 Yes 17 1.61 Yes 0 0 No -29 0.91 Yes 41 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75755033 + NM_003369 UVRAG 1 0.13 0.19 11 6.55 93.77 31 6.57 Yes 12 0.58 No 0 0 No -30 0.68 Yes 40 69.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 75760757 + NM_003369 UVRAG 1 0.07 0.11 7 6.09 76.55 37 7.03 Yes 24 1.52 Yes 0 0 No -36 0.62 No 34 71.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 75776984 + NM_003369 UVRAG 1 1.86 2.51 65 5.79 90.56 28 5.29 No 44 1.43 Yes 0 0 No -27 0.47 No 43 66.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75777256 + NM_003369 UVRAG 1 0.2 0.28 16 8.6 90.78 15 5.49 No 2 1.27 Yes 0 0 No -25 0.92 Yes 45 96.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75777537 + NM_003369 UVRAG 1 1.95 2.61 65 4.25 83.86 42 7.35 Yes 29 2.44 Yes 0 0 No -41 0.81 Yes 29 95.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75778286 + NM_003369 UVRAG 1 0.33 0.44 24 5.52 85.78 46 8.33 Yes 33 1.16 Yes 0 0 No -25 0.59 No 36 73.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 75778815 + NM_003369 UVRAG 1 0.15 0.19 11 -3.15 36.94 26 5.64 Yes 21 0.42 No 0 0 No -33 0.57 No 37 56.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 75779007 + NM_003369 UVRAG 1 0.3 0.39 19 11.69 88.46 47 5.06 No 39 0.86 Yes 0 0 No -41 0.3 No 44 60.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75784907 + NM_003369 UVRAG 1 0.31 0.39 21 10.83 90.56 34 4.02 No 71 -3.66 No 0 0 No -22 0.91 Yes 48 83.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 75810114 + NM_003369 UVRAG 1 0.09 0.11 8 9.38 90.55 13 4.71 No 37 1.8 Yes 0 0 No -25 0.71 Yes 45 80 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75829458 + NM_003369 UVRAG 1 0.15 0.15 10 7.98 88.96 41 8.18 Yes 28 1.18 Yes 0 0 No -41 0.57 No 38 55.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 75843051 + NM_003369 UVRAG 1 0.22 0.24 14 5.69 73.33 23 6.39 Yes 10 0.75 No 0 0 No -22 0.86 Yes 48 90.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 75844483 + NM_003369 UVRAG 1 1.74 1.74 54 4.19 83.7 38 9.31 Yes 25 1.4 Yes 0 0 No -38 0.76 Yes 32 86.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 75846689 + NM_003369 UVRAG 1 0.3 0.29 18 6.7 89.05 46 6.51 Yes 6 0.33 No 0 0 No -21 0.62 No 49 70.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 75848237 + NM_003369 UVRAG 1 0.26 0.31 15 7.31 79.31 23 7.42 Yes 14 0.32 No 22 0.82 Yes -22 0.87 Yes 48 96.47 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 1348794 + NM_001317934 UVSSA 1 5.05 1.04 47 8.83 87.27 29 5.39 No 16 1.6 Yes 28 0.92 Yes -28 0.95 Yes 42 93.73 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 1349347 + NM_001317934 UVSSA 1 1.17 0.22 14 8.97 80.53 29 5.19 No -1 0.62 No 0 0 No -28 0.85 Yes 42 86.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 1358295 + NM_001317934 UVSSA 1 0.93 0.15 10 12.09 92.59 22 5.29 No 55 0.17 No 0 0 No -21 0.92 Yes 49 93.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 1374439 + NM_001317934 UVSSA 1 1.44 0.22 14 0.34 0 14 4.47 No 11 -1.98 No 0 0 No -26 0.43 No 51 47.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 106729218 - NR_045607 UXS1 1 0.4 0.21 12 -0.15 0 28 6.63 Yes 15 2.12 Yes 0 0 No -27 0.93 Yes 43 93.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 106761932 - NR_045607 UXS1 1 0.61 0.42 22 -4.74 70.49 39 7.23 Yes 65 1.32 Yes 39 0.44 Yes -43 0.38 No 26 66.8 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 106778002 - NR_045607 UXS1 1 0.32 0.32 18 9.55 82.61 37 7.55 Yes 24 1.07 Yes 0 0 No -36 0.69 Yes 34 87.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 47513453 - NM_004182 UXT 1 0.11 0.71 36 8.37 75.94 28 6.71 Yes 15 1.13 Yes 0 0 No -27 0.54 No 44 71.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 47513493 - NM_004182 UXT 1 0.03 0.17 8 9.48 90.93 27 5.77 Yes 54 0.65 No 0 0 No -27 0.27 No 44 44.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 47515738 - NM_004182 UXT 1 0.08 0.47 26 8.51 84.5 22 5.73 Yes 49 -1.65 No 0 0 No -26 0.49 No 44 70.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 47516685 - NM_004182 UXT 1 0.63 2.92 66 3.03 0 22 7 Yes 9 2.39 Yes 0 0 No -21 0.63 No 49 33.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 47516685 - NM_004182 UXT 1 0.04 0.21 12 3.03 0 22 7 Yes 9 2.39 Yes 0 0 No -21 0.63 No 49 33.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 47516689 - NM_004182 UXT 1 0.03 0.13 8 -10.51 0 18 6.72 Yes 5 2.42 Yes 0 0 No -23 0.44 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 47517259 - NM_004182 UXT 1 0.06 0.21 12 -0.26 0 29 7.61 Yes 16 0.57 No 0 0 No -28 0.88 Yes 42 90.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 47517262 - NM_004182 UXT 1 0.05 0.19 11 -13.1 0 26 7.42 Yes 13 0.58 No 0 0 No -25 0.9 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 70721992 - NM_018052 VAC14 1 1.41 0.71 34 -0.82 73.23 33 5.65 Yes 65 2.29 Yes 0 0 No -32 0.53 No 38 79.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 70725953 - NM_018052 VAC14 1 12.63 6.39 72 5.48 88.94 24 5.48 No 53 1.28 Yes 0 0 No -28 0.72 Yes 42 66.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 70725990 - NM_018052 VAC14 1 0.49 0.28 17 6.84 86.84 9 5.2 No 16 1.3 Yes 0 0 No -28 0.83 Yes 42 84.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70731077 - NM_018052 VAC14 1 2.9 2.51 58 9.31 84.1 31 6.4 Yes 18 0.69 No 30 0.85 Yes -30 0.93 Yes 40 81.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 70746878 - NM_018052 VAC14 1 0.55 0.35 19 5.13 79.96 69 8.17 Yes 33 1.1 Yes 0 0 No -37 0.7 Yes 33 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70754744 - NM_018052 VAC14 1 0.29 0.18 11 2.93 80.63 30 5.8 Yes 53 1.48 Yes 0 0 No -29 0.78 Yes 41 87.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70754747 - NM_018052 VAC14 1 0.75 0.43 22 8.11 89.68 27 5.55 No 50 1.49 Yes 0 0 No -26 0.78 Yes 44 88.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 70755122 - NM_018052 VAC14 1 0.39 0.21 15 10.66 85.35 32 6.35 Yes 55 2.11 Yes 0 0 No -31 0.54 No 39 57.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 70761034 - NM_018052 VAC14 1 0.34 0.17 10 5.42 95.53 21 4.9 No 66 -1.4 No 0 0 No -20 0.79 Yes 50 80.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 70765263 - NM_018052 VAC14 1 1.4 0.82 33 -0.27 70.23 62 7.1 Yes 5 0.75 No 19 0.23 Yes -56 0.55 No 14 54.95 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 70814849 - NM_018052 VAC14 1 0.28 0.22 14 -4.31 0 20 5.45 No 7 0.32 No 25 0.54 Yes -27 0.28 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 70818853 - NM_018052 VAC14 1 0.41 0.38 23 4.28 73.71 26 4.08 No 1 1.03 Yes 0 0 No -25 0.95 Yes 45 90.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 8065238 - NM_014232 VAMP2 1 0.63 0.42 20 10.08 85.8 26 6.61 Yes 13 1.81 Yes 0 0 No -25 0.86 Yes 45 92.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 7831739 + NM_004781 VAMP3 1 1.25 0.25 15 11.51 79.06 21 5.98 Yes 31 0.39 No 0 0 No -20 0.72 Yes 41 79.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 171678941 - NM_003762 VAMP4 1 1.62 0.46 27 6.98 73.66 27 6.4 Yes 14 0.71 No 0 0 No -26 0.79 Yes 44 89.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 171686389 - NM_003762 VAMP4 1 0.95 0.22 15 5.15 75.93 22 5.75 Yes 9 1.4 Yes 0 0 No -21 0.87 Yes 49 81.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 171688359 - NM_003762 VAMP4 1 0.53 0.13 7 1.94 83.24 33 10.38 Yes 35 0.67 No 29 0.81 Yes -32 0.81 Yes 38 82.51 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 171696205 - NM_003762 VAMP4 1 0.61 0.13 8 8.3 93.61 28 8.41 Yes 15 0.54 No 0 0 No -27 0.89 Yes 43 91.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 171697223 - NM_003762 VAMP4 1 10.87 2.47 64 8.11 88.27 43 7.53 Yes -2 0.26 No 0 0 No -31 0.64 No 39 77.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 171701494 - NM_003762 VAMP4 1 2.58 0.69 34 11.52 85.77 36 7.61 Yes 23 1.2 Yes 0 0 No -35 0.89 Yes 35 92.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85818851 + NM_006634 VAMP5 1 0.45 0.1 7 2.05 0 25 6.04 Yes 23 0.99 Yes 0 0 No -24 0.88 Yes 46 82.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85806134 + NM_003761 VAMP8 1 0.04 0.13 7 -9.14 67.54 23 5.23 No 49 0.99 Yes 0 0 No -26 0.83 Yes 44 78.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85806864 + NM_003761 VAMP8 1 0.17 0.83 38 10.24 89.57 19 5.66 Yes 6 0.93 Yes 23 0.72 Yes -23 0.56 No 45 53.59 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 85807490 + NM_003761 VAMP8 1 0.02 0.11 7 8.43 82.56 39 7.1 Yes 26 1.39 Yes 0 0 No -34 0.66 No 32 64.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 85808876 + NM_003761 VAMP8 1 0.25 1.14 46 11.14 90.32 35 6.24 Yes 22 0.91 Yes 0 0 No -34 0.81 Yes 36 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 85808933 + NM_003761 VAMP8 1 0.68 3.04 65 12.08 89.7 32 5.97 Yes 47 -2 No 0 0 No -32 0.6 No 41 56.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 9924899 + NM_003574 VAPA 1 0.1 0.29 17 6.89 82.63 35 6.68 Yes 9 0.13 No 0 0 No -24 0.89 Yes 46 91.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 9927092 + NM_003574 VAPA 1 0.12 0.38 23 8.01 90.11 21 7.45 Yes 47 0.75 No 0 0 No -31 0.77 Yes 39 86.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 9936401 + NM_003574 VAPA 1 0.03 0.17 11 5.86 86.62 19 4.66 No 30 0.54 No 0 0 No -18 0.66 Yes 52 49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 9938243 + NM_003574 VAPA 1 0.78 0.26 17 8.13 88.26 29 4.08 No 47 1.18 Yes 0 0 No -28 0.89 Yes 42 94.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 56965183 + NM_004738 VAPB 1 0.64 0.51 24 5.87 75.58 25 4.24 No -3 0.02 No 24 0.59 Yes -24 0.52 No 46 53.38 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 56993247 + NM_004738 VAPB 1 0.18 0.14 9 -1.92 0 18 4.51 No 15 1.25 Yes 25 0.48 Yes -54 0.71 Yes 16 66.65 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 57014201 + NM_004738 VAPB 1 1.26 1.28 49 3.8 74.33 38 5.01 No 65 1.23 Yes 0 0 No -38 0.54 No 32 76.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 213139059 + NM_001136475 VASH2 1 0.29 0.14 9 -1.9 0 23 6.32 Yes 10 0.64 No 26 0.74 Yes -22 0.49 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 213139851 + NM_001136475 VASH2 1 0.36 0.26 14 6.61 80.57 40 5.08 No 57 0.77 No 0 0 No -24 0.88 Yes 46 92.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 213144379 + NM_001136475 VASH2 1 0.39 0.17 10 -1.32 0 17 4.16 No 76 0.87 Yes 0 0 No -40 0.53 No 19 78.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 213145940 + NM_001136475 VASH2 1 0.4 0.32 19 -1.07 62.6 22 5.28 No 19 -1.64 No 0 0 No -57 0.67 Yes 49 46.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 213151588 + NM_001136475 VASH2 1 0.61 0.22 14 6.62 89.51 25 5.59 Yes 5 1.74 Yes 0 0 No -24 0.79 Yes 46 91.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 213156639 + NM_001136475 VASH2 1 1.18 0.53 26 3.36 80.35 20 4.42 No 7 1.01 Yes 0 0 No -25 0.44 No 45 59.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 46018819 + NM_003370 VASP 1 0.09 0.26 16 8.77 88.56 27 5.67 Yes 14 0.71 No 0 0 No -26 0.93 Yes 44 94.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 46025290 + NM_003370 VASP 1 0.05 0.15 10 10.95 84.84 27 5.39 No 57 2.28 Yes 0 0 No -26 0.87 Yes 44 96.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46025570 + NM_003370 VASP 1 0.06 0.11 8 6.94 86.33 25 4.49 No 5 0.29 No 29 0.9 Yes -17 0.48 No 46 48.09 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 46025978 + NM_003370 VASP 1 11.51 34.35 72 7.11 88.4 33 6.15 Yes 20 1.26 Yes 29 0.82 Yes -32 0.76 Yes 38 73.43 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 46026904 + NM_003370 VASP 1 0.08 0.44 26 1.09 77.04 39 6.32 Yes 26 0.99 Yes 0 0 No -38 0.85 Yes 32 72.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46027101 + NM_003370 VASP 1 5.12 31.85 72 7.22 90.72 27 5.29 No 14 0.86 Yes 0 0 No -26 0.97 Yes 44 95.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46028135 + NM_003370 VASP 1 0.33 1.71 59 8.67 79.93 24 5.77 Yes 59 1.07 Yes 23 0.84 Yes -23 0.81 Yes 47 72.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 46028243 + NM_003370 VASP 1 0.03 0.17 11 3.65 78.66 25 7.14 Yes 66 1.43 Yes 0 0 No -24 0.75 Yes 46 79.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 46029408 + NM_003370 VASP 1 0.07 0.42 21 3.15 0 14 4.47 No 24 2.74 Yes 0 0 No -36 0.92 Yes 34 93.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6798334 + NM_005428 VAV1 1 0.15 0.22 11 10.09 85.22 33 6.2 Yes 12 0.81 Yes 0 0 No -24 0.42 No 46 42.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 6815337 + NM_005428 VAV1 1 0.27 0.32 19 8.06 93.53 20 5.62 Yes 7 1.21 Yes 0 0 No -30 0.58 No 51 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 6825290 + NM_005428 VAV1 1 0.15 0.15 11 5.25 75.07 22 5.29 No 32 1.47 Yes 25 0.77 Yes -21 0.53 No 49 76.96 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 6828314 + NM_005428 VAV1 1 0.09 0.13 7 2.65 71.32 19 6.71 Yes 65 -5 No 29 0.69 Yes -18 0.68 Yes 52 70.41 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 6828831 + NM_005428 VAV1 1 0.16 0.19 11 -5.03 0 16 3.87 No NA NA NA 0 0 No -26 0.52 No 44 40.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 6829883 + NM_005428 VAV1 1 0.64 0.81 32 4.04 68.08 29 5.26 No 44 -2.76 No 23 0.89 Yes -28 0.67 Yes 42 54.64 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 6830091 + NM_005428 VAV1 1 0.12 0.14 9 8.07 83.01 43 6.76 Yes 30 1.15 Yes 0 0 No -42 0.93 Yes 28 91.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6837040 + NM_005428 VAV1 1 0.19 0.15 9 -6.57 0 27 6.97 Yes 70 1.66 Yes 0 0 No -26 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 6837042 + NM_005428 VAV1 1 0.28 0.19 10 6.63 92.56 29 7.11 Yes 72 1.66 Yes 0 0 No -28 0.91 Yes 42 88.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 6852978 + NM_005428 VAV1 1 0.1 0.1 7 -8.52 68.47 22 6.16 Yes 39 -1.54 No 0 0 No -28 0.7 Yes 42 74.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 136635621 - NM_001134398 VAV2 1 0.29 0.43 27 -19.51 57.06 22 5.24 No 50 -3.69 No 0 0 No -25 0.8 Yes 45 85.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 136647389 - NM_001134398 VAV2 1 0.1 0.11 7 8.04 81.5 33 6.22 Yes -3 0.54 No 0 0 No -32 0.91 Yes 38 93.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 136647583 - NM_001134398 VAV2 1 1.58 1.58 55 9.32 87.38 29 5.47 No 73 0.82 Yes 0 0 No -28 0.92 Yes 42 89.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136648747 - NM_001134398 VAV2 1 0.16 0.24 14 -8.12 0 16 4.36 No 3 -1.53 No 23 0.94 Yes -18 0.57 No 58 37.35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 136653587 - NM_001134398 VAV2 1 0.14 0.19 14 5.07 76.25 25 5.57 Yes 36 1.59 Yes 0 0 No -24 0.32 No 46 49.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 136658619 - NM_001134398 VAV2 1 0.29 0.46 22 7.18 85.14 17 7.58 Yes 45 0.63 No 0 0 No -26 0.35 No 28 61.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 136660220 - NM_001134398 VAV2 1 0.1 0.14 8 8.09 86.91 27 6.83 Yes 14 1.14 Yes 0 0 No -26 0.94 Yes 44 93.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136679253 - NM_001134398 VAV2 1 0.09 0.15 9 9.94 88.44 36 6.79 Yes 23 0.86 Yes 0 0 No -35 0.88 Yes 35 96.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136698501 - NM_001134398 VAV2 1 1.85 2.93 62 11.19 80.19 27 5.74 Yes 66 0.62 No 0 0 No -26 0.89 Yes 44 96.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 136710079 - NM_001134398 VAV2 1 0.1 0.19 11 5.77 89.87 23 5 No 10 1.15 Yes 0 0 No -22 0.87 Yes 48 94.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 136714249 - NM_001134398 VAV2 1 0.87 1.4 47 12.94 84.67 33 5.99 Yes 20 0.6 No 0 0 No -20 0.46 No 50 45.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 136769652 - NM_001134398 VAV2 1 0.84 1.25 47 6.08 90.04 52 8.7 Yes NA NA NA 0 0 No -18 0.74 Yes 52 78.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 136791071 - NM_001134398 VAV2 1 0.17 0.26 16 7.41 88.55 16 5.26 No 3 0.81 Yes 24 0.85 Yes -23 0.42 No 40 57.38 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 136791450 - NM_001134398 VAV2 1 0.09 0.13 7 11.71 81.93 32 6.48 Yes 19 1.52 Yes 31 0.78 Yes -25 0.57 No 45 67.11 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 136793015 - NM_001134398 VAV2 1 0.44 0.67 32 6.91 81.52 15 6.13 Yes 2 0.9 Yes 29 0.41 Yes -29 0.8 Yes 41 76.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 136803458 - NM_001134398 VAV2 1 0.07 0.11 7 1.55 63.79 26 6.62 Yes 13 0.75 No 0 0 No -31 0.58 No 39 84.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chrX 154447722 + NM_003372 VBP1 1 0.05 0.13 9 13.1 89.52 29 5.24 No 58 0.73 No 0 0 No -26 0.74 Yes 44 69.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 154448439 + NM_003372 VBP1 1 0.49 1.04 42 -1.23 62.05 29 4.72 No 41 -4.89 No 24 0.58 Yes -28 0.69 Yes 42 67.21 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 154448463 + NM_003372 VBP1 1 0.97 2.11 60 -5.26 0 28 5.74 Yes 15 0.17 No 0 0 No -28 0.51 No 42 45.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 154453662 + NM_003372 VBP1 1 0.07 0.22 15 8.17 84.2 23 5.83 Yes 10 1.25 Yes 0 0 No -22 0.89 Yes 48 92.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 154464130 + NM_003372 VBP1 1 0.03 0.11 8 4.75 73.47 44 7.04 Yes 9 1.46 Yes 0 0 No -27 0.9 Yes 43 94.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 154467039 + NM_003372 VBP1 1 0.12 0.68 35 -2.37 0 31 5.45 No 62 0.56 No 29 0.59 Yes -24 0.73 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 154467049 + NM_003372 VBP1 1 0.07 0.36 22 -2.1 0 41 6.26 Yes 72 0.56 No 29 0.59 Yes -26 0.68 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 154467836 + NM_003372 VBP1 1 0.09 0.49 26 -1.03 0 13 4.12 No 20 0.36 No 0 0 No -12 0.6 No 58 58.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 75848950 + NM_003373 VCL 1 0.17 0.11 7 -0.18 73.81 22 5.1 No 9 0.91 Yes 24 0.72 Yes -21 0.57 No 49 53.89 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 75871666 + NM_003373 VCL 1 1.04 0.36 19 0.97 58.55 41 8.12 Yes 28 2.1 Yes 22 0.88 Yes -40 0.88 Yes 30 95.2 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 35057521 - NM_007126 VCP 1 0.02 0.24 13 -12.7 0 15 4 No 16 0.77 No 0 0 No -28 0.65 No 32 49.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 35057525 - NM_007126 VCP 1 0.14 1.53 48 -9.8 61.32 25 5.92 Yes 12 0.79 Yes 0 0 No -24 0.73 Yes 46 60.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 35059038 - NM_007126 VCP 1 0.01 0.14 8 8.96 84.97 21 5.19 No 8 0.81 Yes 0 0 No -20 0.8 Yes 50 80.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35062135 - NM_007126 VCP 1 0.04 0.43 25 -16.47 0 24 5.2 No 23 1.95 Yes 0 0 No -23 0.91 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 35062153 - NM_007126 VCP 1 0.1 1.11 41 4.69 80.13 18 5.58 Yes 5 1.95 Yes 22 0.98 Yes -27 0.55 No 53 56.75 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 35064481 - NM_007126 VCP 1 0.07 0.32 18 5.2 82.19 27 5.2 No 29 0.12 No 0 0 No -29 0.76 Yes 41 76.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 35066898 - NM_007126 VCP 1 0.07 1 42 6.39 79.39 37 6.48 Yes 58 1.95 Yes 0 0 No -31 0.5 No 34 53.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 35068082 - NM_007126 VCP 1 0.02 0.18 12 1.17 66.94 18 3.97 No 15 1.11 Yes 25 0.72 Yes -40 0.57 No 43 36.89 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 35068352 - NM_007126 VCP 1 0.04 0.22 14 1.55 0 11 4.12 No 16 2.2 Yes 0 0 No -28 0.75 Yes 42 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 35068631 - NM_007126 VCP 1 0.03 0.17 9 9.56 86.77 32 4.76 No 29 1.55 Yes 0 0 No -31 0.87 Yes 39 87.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 67574880 - NM_025054 VCPIP1 1 0.41 0.28 18 4.95 89.23 25 3.47 No 44 -2.16 No 0 0 No -24 0.35 No 47 33.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 50580231 - NR_049738 VCPKMT 1 7.49 1.04 41 9.75 79.71 17 6.08 Yes 4 0.94 Yes 27 0.82 Yes -27 0.62 No 43 58.24 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 133311737 - NM_003374 VDAC1 1 0.02 0.26 9 -6.62 0 20 5.57 Yes 69 0.57 No 26 0.89 Yes -24 0.68 Yes 51 46.63 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 133316647 - NM_003374 VDAC1 1 0.02 0.29 19 -2.95 0 29 4.74 No 16 0.83 Yes 0 0 No -23 0.47 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 133316839 - NM_003374 VDAC1 1 0.09 1.17 47 6.94 80.73 57 7.24 Yes 14 1.27 Yes 0 0 No -26 0.96 Yes 44 96.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 133316886 - NM_003374 VDAC1 1 0.06 0.76 37 9.44 98.74 21 5.57 Yes 66 0.74 No 0 0 No -20 0.78 Yes 50 73.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 133324935 - NM_003374 VDAC1 1 0.39 5.24 69 12.7 87.93 37 7.47 Yes 24 1.06 Yes 36 0.74 Yes -36 0.86 Yes 34 82.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 133328707 - NM_003374 VDAC1 1 33.77 3.08 62 4.36 87.22 52 6.03 Yes 39 0.98 Yes 24 0.64 Yes -27 0.81 Yes 43 74.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 76977645 + NM_001184783 VDAC2 1 0.02 0.13 8 9.44 89.2 51 7.63 Yes 38 1.48 Yes 26 0.66 Yes -30 0.84 Yes 40 66.08 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 76977645 + NM_001184783 VDAC2 1 0.93 6.22 71 9.44 89.2 51 7.63 Yes 38 1.48 Yes 26 0.66 Yes -30 0.84 Yes 40 66.08 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 76977690 + NM_001184783 VDAC2 1 0.01 0.11 8 4.45 84.45 17 5.63 Yes 63 0.6 No 25 0.63 Yes -25 0.73 Yes 45 88.13 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 76977703 + NM_001184783 VDAC2 1 0.2 1.36 54 7.46 82.28 21 4.66 No 76 0.6 No 0 0 No -20 0.83 Yes 50 78.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 76981983 + NM_001184783 VDAC2 1 0.17 0.51 28 10.45 79.3 17 3.87 No 38 0.28 No 18 0.59 Yes -26 0.81 Yes 44 91.85 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 76984121 + NM_001184783 VDAC2 1 0.06 0.24 13 9.17 87.97 26 5.66 Yes 13 0.89 Yes 0 0 No -25 0.88 Yes 45 89.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 42259306 + NM_001135694 VDAC3 1 0.02 0.11 7 -15.82 0 45 7.38 Yes 32 1.41 Yes 0 0 No -33 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 42259879 + NM_001135694 VDAC3 1 0.02 0.1 7 8.03 83.88 34 6.86 Yes 37 0.6 No 0 0 No -33 0.58 No 37 70.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 42260470 + NM_001135694 VDAC3 1 0.03 0.15 10 11.65 94.53 35 7.25 Yes 63 1.42 Yes 0 0 No -28 0.39 No 42 70.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 42262862 + NM_001135694 VDAC3 1 0.02 0.13 7 1.89 72.63 21 5.57 Yes 42 1.07 Yes 24 0.92 Yes -20 0.84 Yes 50 91.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 42262891 + NM_001135694 VDAC3 1 0.02 0.14 9 -12.87 75.13 28 6.16 Yes 71 1.08 Yes 0 0 No -27 0.62 No 43 73.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 48240197 - NM_001017536 VDR 1 0.78 0.26 12 -1.59 0 19 4.57 No 63 0.88 Yes 0 0 No -18 0.87 Yes 52 71.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 48256159 - NM_001017536 VDR 1 1.12 0.14 7 6.23 81.46 25 5.2 No 12 1.17 Yes 0 0 No -24 0.89 Yes 46 95.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43748468 + NM_001287044 VEGFA 1 10.89 3.42 61 10.9 95.1 65 10.24 Yes 52 1.7 Yes 43 0.22 Yes -39 0.45 No 27 37.8 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 43752343 + NM_001287044 VEGFA 1 0.35 0.13 7 0.69 70.75 18 4.9 No 56 -3.85 No 22 0.27 Yes -22 0.34 No 57 38.41 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 64002911 + NM_003377 VEGFB 1 0.6 0.13 9 4.5 82.24 20 5 No 26 0.97 Yes 22 0.71 Yes -19 0.72 Yes 51 69.34 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 64003382 + NM_003377 VEGFB 1 2.32 0.93 37 3.38 68.03 34 5.34 No 21 -0.96 No 0 0 No -21 0.9 Yes 49 89.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 64004992 + NM_003377 VEGFB 1 0.31 0.26 19 6.04 81.07 22 5.74 Yes 9 1.45 Yes 21 0.93 Yes -21 0.72 Yes 49 85.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64004992 + NM_003377 VEGFB 1 43.84 37.89 72 6.04 81.07 22 5.74 Yes 9 1.45 Yes 21 0.93 Yes -21 0.72 Yes 49 85.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64005807 + NM_003377 VEGFB 1 0.13 0.15 9 -5.45 0 12 3.01 No 61 -4.19 No 25 0.77 Yes -15 0.82 Yes 55 44.36 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 56057329 - NM_001330393 VEZF1 1 1.09 0.5 26 3.97 84.41 41 7.34 Yes 28 1.74 Yes 0 0 No -40 0.88 Yes 30 89.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56058166 - NM_001330393 VEZF1 1 20.57 14.64 72 -2.05 58.44 15 5.1 No 72 -4.06 No 21 0.51 Yes -27 0.36 No 58 62.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 95617955 + NR_038242 VEZT 1 4.75 7.85 72 9.08 77.34 34 8.34 Yes 50 0.75 No 28 0.56 Yes -28 0.72 Yes 42 81.26 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 95635939 + NR_038242 VEZT 1 2.94 4.9 71 6.88 82.17 34 7.55 Yes 21 1.24 Yes 33 0.79 Yes -33 0.83 Yes 37 92.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 95637716 + NR_038242 VEZT 1 0.8 1.35 50 5.42 77.51 24 8.18 Yes 11 1.43 Yes 23 0.85 Yes -23 0.81 Yes 47 71.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 95645742 + NR_038242 VEZT 1 0.2 0.33 19 5.7 80.7 30 5.98 Yes 50 0.58 No 29 0.65 Yes -29 0.35 No 41 41.38 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 95650325 + NR_038242 VEZT 1 2986.52 94.26 72 5.62 79.51 37 6.46 Yes 74 0.89 Yes 26 0.72 Yes -36 0.49 No 36 79.42 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 95650925 + NR_038242 VEZT 1 2429.97 80.04 72 7.96 89.28 31 8.13 Yes -1 0.45 No 25 0.65 Yes -30 0.46 No 40 61.09 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 95652020 + NR_038242 VEZT 1 5.94 8.07 71 7.39 93.55 18 6.35 Yes 5 0.65 No 31 0.86 Yes -31 0.69 Yes 39 67.67 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 95656726 + NR_038242 VEZT 1 0.66 0.9 37 6.41 81.8 23 6.71 Yes 63 1.08 Yes 0 0 No -22 0.89 Yes 48 90.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 95657521 + NR_038242 VEZT 1 0.09 0.13 8 7.13 78.91 31 9.27 Yes 18 2.08 Yes 30 0.95 Yes -30 0.89 Yes 40 91.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 95660162 + NR_038242 VEZT 1 0.1 0.14 9 3.68 77.97 22 6.22 Yes 51 1.56 Yes 0 0 No -21 0.79 Yes 49 78.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 95663826 + NR_038242 VEZT 1 129.43 86.31 72 6.16 0 16 4.58 No 17 0.12 No 26 0.46 Yes -22 0.46 No 41 76.43 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 95668579 + NR_038242 VEZT 1 0.57 0.97 43 6.54 73.2 32 6.34 Yes 52 1.12 Yes 0 0 No -31 0.42 No 39 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 95668521 + NR_038242 VEZT 1 1.01 1.67 59 -4.78 0 40 3.55 No 50 0.5 No 21 0.73 Yes -16 0.32 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 95687459 + NR_038242 VEZT 1 0.27 0.47 10 1.4 74.24 21 5.78 Yes 44 0.77 Yes 0 0 No -32 0.47 No 46 56.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 95692637 + NR_038242 VEZT 1 6.47 7.85 72 8.88 84.74 22 6.27 Yes 14 0.43 No 21 0.71 Yes -21 0.43 No 49 64.28 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 95692869 + NR_038242 VEZT 1 1.19 1.44 50 9.83 92.1 15 5.55 No 59 0.99 Yes 26 0.64 Yes -26 0.53 No 46 64.6 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 95693967 + NR_038242 VEZT 1 0.2 0.24 16 7.98 82.32 20 5.1 No 53 0.57 No 0 0 No -61 0.37 No 9 21.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 11600342 - NM_001128219 VGLL4 1 2.33 0.96 45 10.24 86.81 37 5.53 No 57 -0.62 No 27 0.97 Yes -22 0.94 Yes 48 90.4 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 10184446 + NM_000551 VHL 1 1.81 1.68 57 5.14 79.38 18 6.07 Yes 5 1.39 Yes 0 0 No -17 0.7 Yes 46 63.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 10190387 + NM_000551 VHL 1 0.88 1.58 42 3.01 0 31 8.09 Yes 15 1.7 Yes 0 0 No -30 0.88 Yes 40 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 38042412 + NM_015873 VILL 1 1.27 0.13 9 2.01 76.75 25 5.36 No 50 -4.13 No 24 0.52 Yes -24 0.92 Yes 46 87.62 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 38045990 + NM_015873 VILL 1 8.07 0.36 19 9.96 83.66 19 5.34 No 29 1.06 Yes 0 0 No -22 0.49 No 48 64.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 38047917 + NM_015873 VILL 1 5.34 0.43 23 5.77 80.54 19 6.71 Yes 6 1.55 Yes 24 0.73 Yes -18 0.55 No 52 76.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 17275777 + NM_003380 VIM 1 0.03 0.74 33 -4.83 0 13 4.24 No 21 2.24 Yes 0 0 No -33 0.92 Yes 37 93.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 17276692 + NM_003380 VIM 1 0.02 0.33 18 -11.89 0 40 4.96 No 21 0.31 No 0 0 No -23 0.71 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 17278293 + NM_003380 VIM 1 0 0.14 8 -11 0 27 7.25 Yes 14 0.93 Yes 0 0 No -26 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 77896513 - NM_001193314 VIPAS39 1 0.24 0.15 11 6.19 78.4 51 7.14 Yes 3 1.64 Yes 0 0 No -37 0.47 No 33 76.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 77906840 - NM_001193314 VIPAS39 1 1 0.78 34 11.43 90.14 115 9.98 Yes 11 0.86 Yes 23 0.76 Yes -31 0.48 No 47 63.13 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 77906996 - NM_001193314 VIPAS39 1 0.46 0.29 13 3.76 82.47 36 6.87 Yes 23 1.03 Yes 0 0 No -35 0.79 Yes 35 90.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 77913292 - NM_001193314 VIPAS39 1 0.26 0.17 11 -1.47 68.52 21 4.69 No 68 -5.45 No 0 0 No -20 0.93 Yes 50 82.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 31104674 - NM_206824 VKORC1 1 0.87 0.15 10 3.41 68.78 15 5.47 No -2 -0.78 No 0 0 No -20 0.7 Yes 50 72.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 31104700 - NM_206824 VKORC1 1 1.19 0.21 12 1.52 73.3 10 4.9 No 64 1.94 Yes 0 0 No -14 0.22 No 53 37.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 31104743 - NM_206824 VKORC1 1 542.97 90.14 72 8.99 83.77 34 6.7 Yes 21 2.01 Yes 0 0 No -33 0.86 Yes 37 85.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31104804 - NM_206824 VKORC1 1 12.44 2.04 61 5.6 90.53 16 6.39 Yes 69 -4.18 No 34 0.16 Yes -25 0.46 No 31 35.78 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 65340808 + NM_173517 VKORC1L1 1 0.85 0.53 27 8.29 82.04 20 5.74 Yes -2 1.19 Yes 0 0 No -19 0.62 No 51 84.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 65405016 + NM_173517 VKORC1L1 1 0.21 0.14 9 9.36 85.4 27 5.74 Yes 40 0.72 No 0 0 No -26 0.87 Yes 44 92.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 65415563 + NM_173517 VKORC1L1 1 0.11 0.15 8 9.08 93.6 18 3.64 No 70 -3.77 No 0 0 No -23 0.58 No 49 72.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 65418249 + NM_173517 VKORC1L1 1 0.08 0.11 7 9.39 91.84 28 5 No 23 0.75 No 0 0 No -27 0.89 Yes 43 92.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 65418333 + NM_173517 VKORC1L1 1 0.14 0.18 10 7.36 89.51 18 5.23 No 54 0.83 Yes 0 0 No -24 0.4 No 52 44.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 150572571 + NM_001017980 VMA21 1 0.33 0.72 28 3.99 0 33 6.02 Yes 14 0.71 No 0 0 No -32 0.77 Yes 38 90.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 57832119 + NM_001329394 VMP1 1 0.48 0.99 44 9.32 82.68 29 5.74 Yes 16 0.24 No 0 0 No -31 0.42 No 43 36.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 57842412 + NM_001329394 VMP1 1 0.66 1.36 47 4.53 79.05 30 5.44 No 22 0.03 No 29 0.67 Yes -29 0.72 Yes 41 73.19 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 57857655 + NM_001329394 VMP1 1 0.14 0.24 15 6.23 78.23 15 6.62 Yes 65 0.94 Yes 0 0 No -28 0.57 No 42 85.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 57860243 + NM_001329394 VMP1 1 0.12 0.21 11 9.37 80.51 29 8.47 Yes 16 0.27 No 0 0 No -28 0.84 Yes 42 87.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 57872378 + NM_001329394 VMP1 1 0.17 0.29 18 3.97 84.41 39 5.28 No 26 1.08 Yes 0 0 No -25 0.84 Yes 45 88.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 57895073 + NM_001329394 VMP1 1 0.14 0.17 12 -11.57 0 35 6.17 Yes 8 0.91 Yes 0 0 No -26 0.52 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 57911372 + NM_001329394 VMP1 1 3 3.89 70 11.07 94.52 28 5.29 No 60 0.41 No 27 0.73 Yes -27 0.68 Yes 43 52.97 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 133070506 - NM_078488 VNN2 1 0.8 0.49 24 10.14 86.54 35 5.88 Yes 64 1.34 Yes 0 0 No -34 0.55 No 36 74.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 133075089 - NM_078488 VNN2 1 9.11 3.69 55 12.03 92.63 36 7.11 Yes 44 0.78 Yes 35 0.36 Yes -35 0.56 No 32 72.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 133078989 - NM_078488 VNN2 1 2.91 0.63 33 7.35 74.77 45 7.37 Yes 32 0.93 Yes 0 0 No -28 0.79 Yes 42 74.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 133079042 - NM_078488 VNN2 1 13.86 2.76 66 9.12 94.41 32 6.19 Yes 59 0.24 No 21 0.59 Yes -23 0.88 Yes 47 92.17 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 133081943 - NM_078488 VNN2 1 16.81 3.54 67 9.42 89.61 27 7.64 Yes 14 1.11 Yes 26 0.89 Yes -26 0.8 Yes 44 88.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 133083416 - NM_078488 VNN2 1 1.95 0.4 22 7.64 91.02 21 5.59 Yes 43 0.97 Yes 0 0 No -25 0.72 Yes 45 85.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 133083439 - NM_078488 VNN2 1 3.09 0.71 28 8.52 89.29 33 6.65 Yes 61 1.06 Yes 0 0 No -32 0.41 No 42 56.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 55546253 - NM_001321251 VOPP1 1 0.05 0.28 17 12.41 89.35 28 8.11 Yes 15 2.37 Yes 0 0 No -27 0.91 Yes 43 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 55556979 - NM_001321251 VOPP1 1 0.04 0.19 14 8.91 94.62 19 6.63 Yes 41 1.34 Yes 0 0 No -29 0.76 Yes 41 82.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 55560550 - NM_001321251 VOPP1 1 0.04 0.11 7 5.07 77.5 29 6.4 Yes 16 0.01 No 0 0 No -28 0.64 No 42 47.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 55560667 - NM_001321251 VOPP1 1 0.1 0.35 19 8.08 79.22 56 7.59 Yes 9 0.86 Yes 25 0.85 Yes -25 0.76 Yes 45 82.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 55560903 - NM_001321251 VOPP1 1 0.12 0.47 23 10.06 83.95 19 5.37 No 6 1.44 Yes 24 0.89 Yes -24 0.73 Yes 46 85.9 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 55581803 - NM_001321251 VOPP1 1 0.11 0.31 20 10.91 98.88 20 5.1 No 28 0.88 Yes 0 0 No -23 0.6 No 48 59.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 55585457 - NM_001321251 VOPP1 1 0.35 1.13 40 4.15 84.43 23 5.38 No 10 0.29 No 0 0 No -22 0.88 Yes 48 93.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 55586901 - NM_001321251 VOPP1 1 0.14 0.4 20 -4.03 54.04 42 6.93 Yes 42 0.88 Yes 0 0 No -41 0.36 No 29 57.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 55586911 - NM_001321251 VOPP1 1 0.15 0.47 21 -0.81 0 32 6.16 Yes 32 0.91 Yes 0 0 No -31 0.42 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 55586953 - NM_001321251 VOPP1 1 0.25 0.74 33 6.46 86.4 29 3.99 No 36 -0.8 No 0 0 No -22 0.46 No 49 41.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 55586993 - NM_001321251 VOPP1 1 0.04 0.14 9 -5.29 63.91 30 5.83 Yes 65 1.66 Yes 0 0 No -29 0.77 Yes 41 46.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 55587018 - NM_001321251 VOPP1 1 0.29 0.9 38 2.65 66.27 53 8.93 Yes 40 1.68 Yes 0 0 No -52 0.55 No 26 73.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 24095307 - NM_013378 VPREB3 1 1.9 0.67 29 2.34 76.48 20 5.82 Yes 7 0.89 Yes 0 0 No -19 0.5 No 51 84.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 118940139 + NM_021729 VPS11 1 1.79 0.99 41 -5.21 80.5 22 5 No 27 0.48 No 23 0.64 Yes -21 0.82 Yes 52 61.42 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 118947528 + NM_021729 VPS11 1 0.41 0.22 15 -2.31 67.93 25 5.2 No 12 0.6 No 24 0.85 Yes -24 0.87 Yes 46 71.62 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 118948854 + NM_021729 VPS11 1 0.56 0.33 22 3.44 75.26 40 5.57 Yes 4 0.39 No 34 0.61 Yes -33 0.5 No 36 75.39 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 79824320 + NM_033305 VPS13A 1 0.42 0.39 22 3.23 67.79 34 6 Yes 63 -2.43 No 24 0.69 Yes -33 0.89 Yes 37 97.38 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 79826128 + NM_033305 VPS13A 1 29.75 11.33 72 5.82 79.16 22 4.27 No 27 0.05 No 22 0.93 Yes -22 0.9 Yes 48 93.62 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 79826197 + NM_033305 VPS13A 1 0.33 0.13 8 9.06 83.17 51 6.66 Yes 31 0.87 Yes 0 0 No -43 0.61 No 27 69.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 79835200 + NM_033305 VPS13A 1 0.53 0.36 21 1.3 0 18 3.96 No 64 1.12 Yes 0 0 No -31 0.4 No 32 47.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 79843025 + NM_033305 VPS13A 1 0.14 0.15 9 1.37 0 35 7.61 Yes 2 0.13 No 26 0.83 Yes -34 0.48 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 79853189 + NM_033305 VPS13A 1 0.19 0.14 9 -6.32 79.22 22 4.69 No 6 0.97 Yes 0 0 No -21 0.74 Yes 49 67.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 79856562 + NM_033305 VPS13A 1 1.49 0.81 43 7.83 79.59 57 8.62 Yes 44 1.73 Yes 0 0 No -25 0.87 Yes 45 79.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 79865043 + NM_033305 VPS13A 1 0.28 0.17 11 3.72 79.88 22 5.1 No -3 0.08 No 0 0 No -28 0.7 Yes 42 69.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 79896441 + NM_033305 VPS13A 1 0.6 0.56 26 6.61 89.21 24 7.79 Yes 71 0.25 No 0 0 No -23 0.79 Yes 47 89.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 79897124 + NM_033305 VPS13A 1 0.29 0.19 12 4.64 78.94 52 4.84 No 6 0.41 No 0 0 No -27 0.45 No 43 45.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 79931158 + NM_033305 VPS13A 1 3.4 1.96 56 5.82 74.75 16 5.23 No 24 0.74 No 0 0 No -24 0.55 No 42 43.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 79938640 + NM_033305 VPS13A 1 0.21 0.18 9 8.22 91.35 45 6.5 Yes 44 1.04 Yes 0 0 No -37 0.85 Yes 33 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 79952325 + NM_033305 VPS13A 1 0.35 0.19 10 6.41 82.54 31 5.36 No 63 0.56 No 0 0 No -30 0.83 Yes 40 84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 79959117 + NM_033305 VPS13A 1 1.03 0.63 32 -0.21 77.1 16 5.1 No 3 0.78 Yes 0 0 No -21 0.46 No 51 74.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 79968385 + NM_033305 VPS13A 1 0.41 0.24 14 7.19 85.73 18 4.83 No -1 0.19 No 0 0 No -23 0.61 No 47 69.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 79968415 + NM_033305 VPS13A 1 0.25 0.15 9 4.43 81.36 27 4.99 No 29 0.18 No 0 0 No -24 0.72 Yes 44 72.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 79978029 + NM_033305 VPS13A 1 0.46 0.21 9 10.38 80.28 34 7.15 Yes 21 1.44 Yes 0 0 No -28 0.7 Yes 37 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 79985788 + NM_033305 VPS13A 1 0.38 0.24 15 4.24 80.55 23 4.14 No 39 0.63 No 26 0.49 Yes -25 0.69 Yes 45 72.56 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 79997194 + NM_033305 VPS13A 1 45.76 14.68 72 12.16 98.6 30 5.25 No 69 0.6 No 29 0.78 Yes -29 0.85 Yes 41 86.8 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 79999500 + NM_033305 VPS13A 1 2.46 0.79 34 6.92 82.01 38 8.12 Yes 25 2.51 Yes 37 0.91 Yes -37 0.85 Yes 33 94.56 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 80004866 + NM_033305 VPS13A 1 0.51 0.17 9 9.7 94.44 13 6.71 Yes 70 -3.03 No 0 0 No -18 0.26 No 45 43.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 80004910 + NM_033305 VPS13A 1 0.28 0.11 8 2.89 70.25 27 5.29 No 17 -2.79 No 29 0.51 Yes -29 0.51 No 41 74.8 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr9 80004961 + NM_033305 VPS13A 1 1.4 0.43 22 7.65 91.83 25 5.72 Yes 68 -4.4 No 0 0 No -29 0.54 No 46 66.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 80030604 + NM_033305 VPS13A 1 0.32 0.14 9 6.57 100 16 4.58 No 43 -2.68 No 0 0 No -20 0.74 Yes 50 77.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 100068153 + NM_017890 VPS13B 1 0.52 0.32 17 11.15 88.27 31 6.31 Yes 18 1.5 Yes 0 0 No -30 0.85 Yes 40 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100075335 + NM_017890 VPS13B 1 3.9 2.26 62 3.02 76.22 27 7.74 Yes -1 0.34 No 0 0 No -26 0.52 No 43 68.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 100112195 + NM_017890 VPS13B 1 3.28 1.24 47 10.81 92.71 16 4.78 No 3 1.24 Yes 0 0 No -27 0.81 Yes 43 82.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100131513 + NM_017890 VPS13B 1 0.38 0.38 21 3.77 77.41 25 5.17 No 2 1.52 Yes 0 0 No -24 0.91 Yes 46 86.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100146462 + NM_017890 VPS13B 1 0.73 0.6 32 6.47 76.39 27 6.9 Yes 71 0.73 No 0 0 No -26 0.79 Yes 44 73.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 100150179 + NM_017890 VPS13B 1 0.19 0.14 7 10.43 91.5 26 6.59 Yes 20 1.54 Yes 0 0 No -25 0.73 Yes 48 75.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100163636 + NM_017890 VPS13B 1 0.33 0.25 14 8.22 87.01 32 4.53 No 19 0.5 No 0 0 No -20 0.92 Yes 50 86.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 100168812 + NM_017890 VPS13B 1 0.15 0.11 7 2.12 73.6 27 5.98 Yes 69 0.85 Yes 0 0 No -26 0.6 No 44 65.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 100206114 + NM_017890 VPS13B 1 0.54 0.43 23 3.98 76.51 14 4.9 No 53 0.43 No 0 0 No -19 0.45 No 51 50.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 100221819 + NM_017890 VPS13B 1 1.52 1.19 48 9.49 87.72 30 8.6 Yes 17 1.1 Yes 29 0.61 Yes -29 0.39 No 41 66.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 100253097 + NM_017890 VPS13B 1 0.23 0.15 11 6.67 75.02 32 9.1 Yes 19 1.86 Yes 31 0.91 Yes -31 0.89 Yes 39 95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 100286411 + NM_017890 VPS13B 1 0.35 0.29 19 -0.49 0 21 4.47 No 65 -3.4 No 22 0.52 Yes -38 0.46 No 49 34.22 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 100287578 + NM_017890 VPS13B 1 0.15 0.1 7 11.13 92.63 29 6.58 Yes 64 0.36 No 0 0 No -29 0.36 No 42 35.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 100301889 + NM_017890 VPS13B 1 0.66 0.39 17 5.25 85.2 15 4.93 No -2 0.85 Yes 0 0 No -18 0.87 Yes 52 88.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100326863 + NM_017890 VPS13B 1 0.24 0.14 7 5.41 74.24 20 7.13 Yes 72 0.89 Yes 0 0 No -19 0.77 Yes 51 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100341013 + NM_017890 VPS13B 1 0.57 0.35 22 -10.62 72.09 33 5.62 Yes 3 0.49 No 0 0 No -32 0.36 No 38 58.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 100403787 + NM_017890 VPS13B 1 4.82 1.9 60 7.06 86.62 32 5.91 Yes 58 1.32 Yes 0 0 No -31 0.84 Yes 39 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100412314 + NM_017890 VPS13B 1 1.64 0.54 27 9.55 88.85 30 5.91 Yes 25 1.3 Yes 0 0 No -29 0.81 Yes 41 86.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100417426 + NM_017890 VPS13B 1 1.19 0.46 22 11.38 87.28 24 5.39 No 34 2.01 Yes 0 0 No -23 0.51 No 47 80.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 100436494 + NM_017890 VPS13B 1 0.55 0.15 9 7.72 77.55 42 7.32 Yes 71 0.65 No 41 0.29 Yes -39 0.92 Yes 31 87.09 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 100443748 + NM_017890 VPS13B 1 1.51 0.57 33 1.96 61.55 26 4.37 No 13 0.16 No 25 0.65 Yes -26 0.65 No 44 71.89 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 100456347 + NM_017890 VPS13B 1 1.31 0.65 31 4.8 83.28 49 6.95 Yes 30 0.82 Yes 0 0 No -42 0.6 No 28 62.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 100456925 + NM_017890 VPS13B 1 1.19 0.6 29 7.39 92.91 41 11.14 Yes 28 1.05 Yes 0 0 No -41 0.44 No 30 66.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 100481589 + NM_017890 VPS13B 1 0.23 0.1 7 9.44 87.15 28 6.01 Yes 15 1.28 Yes 0 0 No -27 0.8 Yes 43 70.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100514257 + NM_017890 VPS13B 1 1.75 0.61 33 5.72 90.92 26 5.29 No 13 1.52 Yes 0 0 No -25 0.91 Yes 45 95.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100595831 + NM_017890 VPS13B 1 0.53 0.15 10 3.99 83.32 26 5.1 No 40 0.23 No 0 0 No -21 0.61 No 49 70.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 100596249 + NM_017890 VPS13B 1 4.4 1.49 57 8.7 93.74 21 5.2 No 33 1.55 Yes 0 0 No -20 0.6 No 44 60.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 100784250 + NM_017890 VPS13B 1 0.32 0.13 8 11.71 90.18 25 5.57 Yes 76 0.94 Yes 0 0 No -24 0.64 No 46 74.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 100809492 + NM_017890 VPS13B 1 1.02 0.29 17 1.8 0 46 6.23 Yes 33 1.12 Yes 0 0 No -25 0.47 No 39 39.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 100822411 + NM_017890 VPS13B 1 0.7 0.14 10 7.86 83.93 23 6.08 Yes 10 1.95 Yes 0 0 No -22 0.91 Yes 48 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 100823152 + NM_017890 VPS13B 1 0.56 0.14 9 0.61 0 15 4.23 No 73 -6.56 No 0 0 No -18 0.95 Yes 52 89.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 100833525 + NM_017890 VPS13B 1 0.31 0.14 9 -2.36 0 26 4.82 No 72 -4.1 No 0 0 No -28 0.38 No 45 58.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 100836092 + NM_017890 VPS13B 1 0.72 0.25 14 4.43 76.61 32 5.68 Yes 34 0.54 No 0 0 No -31 0.74 Yes 39 81.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 100846789 + NM_017890 VPS13B 1 0.63 0.21 12 8.91 99.43 30 6.21 Yes 24 0.46 No 0 0 No -29 0.92 Yes 41 93.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 100868416 + NM_017890 VPS13B 1 0.5 0.13 9 6.38 80.46 29 5.66 Yes 61 0.54 No 0 0 No -28 0.79 Yes 42 80.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 100869696 + NM_017890 VPS13B 1 0.82 0.14 10 9.19 92.6 30 5.92 Yes 17 0.65 No 0 0 No -29 0.89 Yes 41 81.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 100887649 + NM_017890 VPS13B 1 1.63 0.36 19 -0.51 0 29 7.07 Yes 16 1.4 Yes 0 0 No -28 0.87 Yes 42 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 62160968 - NM_018080 VPS13C 1 0.14 0.15 11 -0.43 0 43 7.36 Yes 6 1.77 Yes 0 0 No -30 0.52 No 28 77.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 62173868 - NM_018080 VPS13C 1 0.81 0.86 36 -7.43 0 14 3.99 No 46 0.55 No 22 0.68 Yes -13 0.76 Yes 57 63.23 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 62198187 - NM_018080 VPS13C 1 2.85 3.08 68 7.85 99.43 19 5.84 Yes 6 0.66 No 0 0 No -27 0.81 Yes 45 78.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 62202409 - NM_018080 VPS13C 1 0.21 0.26 14 6.69 84.35 36 6.39 Yes -4 0.59 No 0 0 No -26 0.54 No 46 30.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 62208215 - NM_018080 VPS13C 1 0.1 0.11 8 -2.78 0 10 4 No 18 0.96 Yes 0 0 No -30 0.88 Yes 40 95.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 62210984 - NM_018080 VPS13C 1 1.85 1.78 53 8.8 86.63 43 4.82 No 49 0.44 No 0 0 No -31 0.48 No 39 58.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 62222897 - NM_018080 VPS13C 1 0.64 1.14 44 5.78 83.71 21 4.6 No 8 0.33 No 0 0 No -26 0.67 Yes 44 80 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 62228721 - NM_018080 VPS13C 1 0.25 0.39 22 2.29 0 20 4.41 No 18 0.9 Yes 0 0 No -30 0.72 Yes 51 74.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 62228732 - NM_018080 VPS13C 1 0.06 0.1 7 5.52 73.5 20 6.52 Yes 7 0.88 Yes 0 0 No -19 0.68 Yes 51 59.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 62232918 - NM_018080 VPS13C 1 0.31 0.51 25 8.89 90.57 31 4.8 No 19 -2.22 No 0 0 No -30 0.44 No 46 43.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 62241786 - NM_018080 VPS13C 1 0.19 0.21 13 6.56 76.15 27 4.77 No 62 1.28 Yes 0 0 No -21 0.73 Yes 49 58.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 62242613 - NM_018080 VPS13C 1 0.16 0.31 15 0.57 0 23 4.7 No 10 0.92 Yes 0 0 No -31 0.8 Yes 39 91.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 62243012 - NM_018080 VPS13C 1 0.1 0.17 10 -3.03 62.87 66 8.39 Yes 45 0.83 Yes 0 0 No -24 0.91 Yes 46 78.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 62249642 - NM_018080 VPS13C 1 1 1.35 49 3.24 79.14 67 7.86 Yes -1 -2.32 No 0 0 No -33 0.79 Yes 37 60.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 62250878 - NM_018080 VPS13C 1 0.66 0.53 24 8.09 82.23 14 5.17 No 1 0.74 No 0 0 No -29 0.6 No 41 55.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 62250943 - NM_018080 VPS13C 1 0.12 0.11 8 0.85 52.87 64 8.55 Yes 51 0.41 No 33 0.55 Yes -29 0.68 Yes 28 44.15 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 62251790 - NM_018080 VPS13C 1 1.44 2.42 64 0.23 0 87 9.15 Yes 66 1.17 Yes 0 0 No -24 0.63 No 46 71.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 62256171 - NM_018080 VPS13C 1 0.11 0.17 10 3.33 73.44 24 5.2 No 0 0.3 No 24 0.94 Yes -23 0.77 Yes 47 48.5 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 62263809 - NM_018080 VPS13C 1 0.15 0.18 11 9.58 92.83 21 5.98 Yes 8 1.29 Yes 0 0 No -20 0.61 No 50 64.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 62264962 - NM_018080 VPS13C 1 0.34 0.39 19 -1.14 81.44 21 5.94 Yes 8 0.49 No 0 0 No -30 0.64 No 40 89.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 62265707 - NM_018080 VPS13C 1 0.12 0.19 11 7.99 93.55 18 5.81 Yes 53 1.28 Yes 0 0 No -27 0.55 No 43 47.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 62281423 - NM_018080 VPS13C 1 0.29 0.79 35 8.86 88.27 29 6.32 Yes 16 1.36 Yes 0 0 No -28 0.92 Yes 42 95.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 62285712 - NM_018080 VPS13C 1 0.08 0.13 9 10.88 88.14 33 5.03 No 20 1.56 Yes 0 0 No -26 0.75 Yes 44 87.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 62302748 - NM_018080 VPS13C 1 0.15 0.28 16 4.76 78.41 14 4.74 No 46 0.43 No 0 0 No -26 0.71 Yes 44 59.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 62302883 - NM_018080 VPS13C 1 0.16 0.29 19 9.25 86.37 22 6.77 Yes 9 0.75 No 0 0 No -21 0.58 No 38 61.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 62306213 - NM_018080 VPS13C 1 0.97 1.78 50 4.53 81.95 23 5.03 No 53 0.82 Yes 25 0.93 Yes -25 0.78 Yes 45 59.15 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 62314399 - NM_018080 VPS13C 1 2.42 3.53 68 6.93 89.66 28 5.83 Yes 55 -4.24 No 0 0 No -27 0.8 Yes 43 93.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 62320620 - NM_018080 VPS13C 1 0.43 0.64 27 3.79 74.83 55 7.25 Yes 30 0.17 No 22 0.62 Yes -42 0.33 No 27 52.66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 62325074 - NM_018080 VPS13C 1 0.11 0.17 8 6.95 82.33 59 6.94 Yes 46 1.25 Yes 0 0 No -21 0.65 No 49 53.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 62330621 - NM_018080 VPS13C 1 0.1 0.13 8 6.45 86.16 20 6.06 Yes 7 0.9 Yes 0 0 No -19 0.64 No 51 84.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 62340014 - NM_018080 VPS13C 1 0.31 0.26 18 9.93 95.67 35 6.64 Yes 22 0.64 No 0 0 No -23 0.91 Yes 47 91.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 62350634 - NM_018080 VPS13C 1 0.27 0.19 12 5.66 91.54 43 7.92 Yes 30 1.05 Yes 0 0 No -42 0.62 No 28 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 12295119 + NM_018156 VPS13D 1 0.2 0.13 7 5.38 86.97 22 8.59 Yes 71 0.47 No 0 0 No -21 0.8 Yes 49 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12301951 + NM_018156 VPS13D 1 0.87 0.53 23 7.54 82.46 33 5.98 Yes 56 -2.22 No 0 0 No -23 0.73 Yes 47 74.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12316332 + NM_018156 VPS13D 1 2.06 0.82 43 -2.5 59.43 40 6.78 Yes 27 1.1 Yes 23 0.74 Yes -39 0.47 No 31 63.96 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 12316392 + NM_018156 VPS13D 1 0.43 0.15 11 -13.42 58.93 12 5.57 Yes -1 0.31 No 0 0 No -29 0.39 No 59 54.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 12316403 + NM_018156 VPS13D 1 0.3 0.13 8 -8.64 0 9 4.47 No 63 -2.28 No 0 0 No -20 0.33 No 57 28.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 12328768 + NM_018156 VPS13D 1 0.54 0.25 13 3.94 0 9 3.87 No 61 0.62 No 0 0 No -26 0.97 Yes 44 96.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12339648 + NM_018156 VPS13D 1 0.27 0.13 8 2.12 0 20 6.05 Yes 7 1.2 Yes 0 0 No -24 0.85 Yes 46 69.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12365352 + NM_018156 VPS13D 1 0.73 0.17 12 6.11 82.57 25 6.85 Yes 63 -2.1 No 0 0 No -24 0.69 Yes 46 70.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12367574 + NM_018156 VPS13D 1 1.54 0.28 17 3.95 84.41 25 6.14 Yes 12 0.68 No 0 0 No -24 0.77 Yes 46 65.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 12371512 + NM_018156 VPS13D 1 0.67 0.13 7 -5.27 82.43 23 5.72 Yes 27 1.11 Yes 0 0 No -26 0.54 No 48 68.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 12371563 + NM_018156 VPS13D 1 1.18 0.42 21 6.1 81.77 19 4.34 No 61 0.9 Yes 21 0.83 Yes -22 0.49 No 48 77.46 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 12378712 + NM_018156 VPS13D 1 0.52 0.17 9 10.28 83.28 21 6.24 Yes 8 0.81 Yes 0 0 No -21 0.73 Yes 49 80.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12382740 + NM_018156 VPS13D 1 1.87 0.82 34 9.49 91.6 27 5.74 Yes -3 0.52 No 0 0 No -26 0.85 Yes 44 76.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12383764 + NM_018156 VPS13D 1 0.43 0.11 7 -8.97 79.36 32 4.65 No 76 0.36 No 0 0 No -31 0.87 Yes 39 89.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12398287 + NM_018156 VPS13D 1 82.92 5.69 69 10.07 88.43 24 6.16 Yes 11 2.02 Yes 23 0.95 Yes -23 0.73 Yes 47 77.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 12401839 + NM_018156 VPS13D 1 251.92 16.54 72 5.33 82.3 28 5.66 Yes 15 0.99 Yes 24 0.94 Yes -27 0.96 Yes 43 96.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 12409297 + NM_018156 VPS13D 1 0.64 0.19 11 5.7 82.51 55 5.29 No 13 0.21 No 0 0 No -25 0.81 Yes 45 90.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 12414197 + NM_018156 VPS13D 1 1.17 0.32 21 6.6 88.77 16 7.57 Yes 31 0.71 No 0 0 No -29 0.49 No 41 54.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 12410721 + NM_018156 VPS13D 1 0.41 0.11 8 7.11 90.61 21 6.62 Yes 8 1.37 Yes 0 0 No -20 0.39 No 50 62.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 12420807 + NM_018156 VPS13D 1 0.5 0.13 9 6.38 80.31 12 5.61 Yes -1 1.26 Yes 0 0 No -30 0.76 Yes 40 69.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12427654 + NM_018156 VPS13D 1 0.48 0.15 10 5.46 78.21 127 4.95 No 36 0.75 No 0 0 No -38 0.28 No 36 37.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 12450444 + NM_018156 VPS13D 1 0.27 0.14 9 7.28 83.15 19 5.48 No 6 0.61 No 0 0 No -31 0.7 Yes 39 66.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 12463879 + NM_018156 VPS13D 1 1.12 0.42 28 0.08 79.55 44 7.01 Yes 31 0.8 Yes 0 0 No -43 0.83 Yes 27 94.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 12545920 + NM_018156 VPS13D 1 0.58 0.11 8 5.94 96.22 16 4.3 No 29 1.44 Yes 0 0 No -26 0.32 No 48 42.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 12559494 + NM_018156 VPS13D 1 1.36 0.32 19 2.79 70.95 53 4.69 No 1 1.53 Yes 0 0 No -43 0.37 No 27 70.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 2823779 + NM_022575 VPS16 1 5.38 2.86 64 6.39 80.9 13 4.89 No 0 0.55 No 0 0 No -30 0.82 Yes 40 90.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2841098 + NM_022575 VPS16 1 0.24 0.14 9 -3.11 0 27 7.6 Yes 14 1.27 Yes 0 0 No -26 0.79 Yes 44 85.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 2841637 + NM_022575 VPS16 1 0.24 0.24 14 6.06 78.75 25 5.57 Yes 12 0.63 No 0 0 No -24 0.87 Yes 46 80.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2841657 + NM_022575 VPS16 1 0.46 0.43 25 -2.91 0 16 4.36 No 32 0.62 No 0 0 No -15 0.78 Yes 55 59.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 2841822 + NM_022575 VPS16 1 0.16 0.11 8 0.36 72.06 24 4.8 No 11 0.66 No 0 0 No -23 0.9 Yes 47 86.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2842421 + NM_022575 VPS16 1 1.33 0.78 35 11.02 80.43 23 6 Yes 10 1.2 Yes 21 0.88 Yes -22 0.92 Yes 48 84.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 2842516 + NM_022575 VPS16 1 0.39 0.19 12 8.78 85.47 32 6.16 Yes 19 0.59 No 0 0 No -31 0.64 No 45 73.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 2843701 + NM_022575 VPS16 1 0.25 0.21 12 -7.29 0 28 6.59 Yes 15 0.15 No 29 0.41 Yes -27 0.92 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 2843706 + NM_022575 VPS16 1 0.72 0.6 30 -20.43 0 13 3.86 No 0 0.6 No 29 0.41 Yes -12 0.81 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 2846798 + NM_022575 VPS16 1 0.17 0.17 11 -0.42 72.58 29 7.14 Yes 58 -3.9 No 0 0 No -31 0.61 No 39 63.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41188363 + NM_020857 VPS18 1 1.04 0.5 23 9.34 96.71 28 5.29 No 11 1.17 Yes 0 0 No -23 0.91 Yes 47 96.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41190855 + NM_020857 VPS18 1 0.55 0.28 18 8.36 86.16 22 7.28 Yes 9 1.47 Yes 21 0.79 Yes -21 0.86 Yes 49 91.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 41191369 + NM_020857 VPS18 1 0.81 0.47 27 2.87 74.39 23 5.64 Yes 2 0.32 No 0 0 No -22 0.93 Yes 48 88.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 70916807 + NM_001318944 VPS26A 1 0.23 0.35 23 1.45 66.18 34 4.62 No 64 0.71 No 0 0 No -18 0.45 No 52 54.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 70928226 + NM_001318944 VPS26A 1 0.06 0.14 9 -4.64 0 19 4.36 No 37 0.31 No 23 0.88 Yes -31 0.74 Yes 39 69.7 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 134105388 + NM_052875 VPS26B 1 0.48 0.22 16 7 77.97 18 4.68 No 63 1.21 Yes 0 0 No -27 0.55 No 43 63.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 134106235 + NM_052875 VPS26B 1 2.66 1.11 46 9.97 92.68 20 5.27 No 27 1.33 Yes 27 0.85 Yes -27 0.89 Yes 43 80.64 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 134110358 + NM_052875 VPS26B 1 3.98 1.46 48 3.29 82.62 30 5.57 Yes 17 1.16 Yes 0 0 No -29 0.87 Yes 41 95.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145650384 - NM_016208 VPS28 1 9.59 15.57 72 -2.36 0 19 4.32 No 51 1.97 Yes 19 0.54 Yes -18 0.6 No 52 57.19 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 145650424 - NM_016208 VPS28 1 0.79 1.29 55 -0.38 0 14 4.47 No 11 2 Yes 19 0.54 Yes -23 0.52 No 47 84.93 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 145651443 - NM_016208 VPS28 1 0.4 0.49 24 -6.18 0 28 5.48 No 49 -0.91 No 0 0 No -27 0.52 No 43 59.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 145651466 - NM_016208 VPS28 1 0.09 0.11 7 6.44 73.29 27 5.21 No 26 -1.12 No 23 0.8 Yes -25 0.85 Yes 45 83.43 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 145651489 - NM_016208 VPS28 1 0.11 0.15 11 -0.33 0 16 4.36 No 3 0.35 No 23 0.8 Yes -15 0.48 No 55 43.56 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 145652655 - NM_016208 VPS28 1 1.72 1.19 48 7.45 89.36 27 5.39 No 65 1.57 Yes 0 0 No -26 0.76 Yes 44 69.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 145652675 - NM_016208 VPS28 1 2.91 2.1 58 2.33 0 58 8.83 Yes 45 1.56 Yes 25 0.02 Yes -57 0.95 Yes 13 94.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 110933900 - NM_001282150 VPS29 1 0.94 1.35 51 6.83 90.33 19 5 No 34 -2.25 No 0 0 No -18 0.79 Yes 52 82.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110933900 - NM_001282150 VPS29 1 0.1 0.14 9 6.83 90.33 19 5 No 34 -2.25 No 0 0 No -18 0.79 Yes 52 82.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110933993 - NM_001282150 VPS29 1 0.45 0.68 34 3 69.61 20 4.95 No 38 0.62 No 0 0 No -27 0.35 No 43 70.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 110934020 - NM_001282150 VPS29 1 0.1 0.14 7 -1.59 0 36 6.06 Yes 11 0.66 No 20 0.87 Yes -23 0.8 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 110934808 - NM_001282150 VPS29 1 0.99 1.33 46 7.99 81.51 33 4.6 No 54 1.42 Yes 22 0.59 Yes -22 0.57 No 48 55.64 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 110934808 - NM_001282150 VPS29 1 0.15 0.22 14 7.99 81.51 33 4.6 No 54 1.42 Yes 22 0.59 Yes -22 0.57 No 48 55.64 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 110936662 - NM_001282150 VPS29 1 0.14 0.22 14 1.32 68.77 28 6.93 Yes 46 0.21 No 0 0 No -27 0.87 Yes 43 88.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 110936665 - NM_001282150 VPS29 1 6.99 10.04 72 3.9 75.55 25 6.71 Yes 43 0.22 No 24 0.95 Yes -24 0.85 Yes 46 90.95 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 110937936 - NM_001282150 VPS29 1 11.44 0.39 23 8.43 78.36 42 5.42 No 25 0.9 Yes 0 0 No -37 0.39 No 33 43.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 122717487 - NM_022916 VPS33A 1 0.16 0.18 9 3.51 78.43 34 6.11 Yes 61 1.14 Yes 0 0 No -33 0.47 No 12 48.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 122717543 - NM_022916 VPS33A 1 0.09 0.11 7 6.36 85.36 18 4.9 No 5 1.15 Yes 0 0 No -24 0.66 Yes 46 59.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 122725679 - NM_022916 VPS33A 1 0.2 0.21 12 3.87 84.41 36 6.07 Yes 31 1.25 Yes 0 0 No -30 0.67 Yes 40 84.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122729289 - NM_022916 VPS33A 1 0.14 0.19 11 6 75.07 14 3.29 No 69 0.59 No 0 0 No -23 0.82 Yes 47 92.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 122738091 - NM_022916 VPS33A 1 0.8 0.99 43 3.06 0 31 6.74 Yes 18 1.53 Yes 31 0.72 Yes -31 0.84 Yes 39 89.16 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 122742286 - NM_022916 VPS33A 1 0.76 0.99 42 11.02 87.36 34 4.35 No 21 0.53 No 0 0 No -19 0.48 No 51 54.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 122749352 - NM_022916 VPS33A 1 0.44 0.28 15 10.06 97.25 22 6.63 Yes 9 0.85 Yes 21 0.71 Yes -21 0.54 No 41 51.58 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 91542189 - NM_018668 VPS33B 1 0.2 0.11 7 7.18 87.46 18 5.15 No 5 1.68 Yes 0 0 No -30 0.43 No 40 51.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 91548512 - NM_018668 VPS33B 1 1.18 0.81 34 10.06 85.4 26 5.2 No 13 0.3 No 0 0 No -26 0.78 Yes 44 64.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 91548737 - NM_018668 VPS33B 1 1 0.51 28 0.18 64.38 32 5.92 Yes 75 0.95 Yes 0 0 No -31 0.92 Yes 39 92.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 91549975 - NM_018668 VPS33B 1 1.75 0.76 35 -1.08 79.87 22 4.9 No 47 -4.54 No 23 0.9 Yes -21 0.74 Yes 49 43.6 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 91560295 - NM_018668 VPS33B 1 1.84 0.83 37 9.25 96.9 19 6.6 Yes 6 0.69 No 18 0.64 Yes -29 0.47 No 41 55.07 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 46695050 - NM_018206 VPS35 1 0.06 0.14 9 8.66 93.66 31 5.23 No 71 0.99 Yes 0 0 No -34 0.59 No 36 52.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 46705523 - NM_018206 VPS35 1 0.05 0.15 9 7.14 80.86 20 4.52 No 3 0.67 No 0 0 No -30 0.9 Yes 40 89.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 46710578 - NM_018206 VPS35 1 0.05 0.18 11 6.81 85.41 36 5.87 Yes 5 1.34 Yes 0 0 No -29 0.75 Yes 41 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 46713010 - NM_018206 VPS35 1 0.04 0.13 7 7.57 81.86 43 4.99 No 21 0.26 No 0 0 No -28 0.68 Yes 42 79.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 46715411 - NM_018206 VPS35 1 0.05 0.13 9 -21.18 0 31 4.86 No 61 0.18 No 0 0 No -46 0.32 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 46715433 - NM_018206 VPS35 1 2.6 7.47 72 7.14 85.4 15 5.54 No 72 0.52 No 24 0.83 Yes -24 0.84 Yes 46 86.22 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 52991815 - NM_001282169 VPS36 1 0.28 0.15 8 9.05 85.52 24 5.9 Yes 67 1.16 Yes 0 0 No -30 0.76 Yes 40 67.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 52999385 - NM_001282169 VPS36 1 0.41 0.38 16 5.52 88.76 30 5.06 No 17 1.37 Yes 0 0 No -29 0.89 Yes 41 96.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 53003568 - NM_001282169 VPS36 1 3.56 1.82 54 -2.36 76.59 13 4.89 No 0 1.91 Yes 0 0 No -25 0.55 No 46 57.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 53007656 - NM_001282169 VPS36 1 0.53 0.26 16 11.89 92.51 27 5.38 No 57 1.41 Yes 0 0 No -24 0.88 Yes 46 96.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 53007880 - NM_001282169 VPS36 1 0.13 0.11 8 4.52 0 30 7.57 Yes 74 -1.05 No 0 0 No -29 0.69 Yes 41 64.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 53009010 - NM_001282169 VPS36 1 0.12 0.13 8 2.73 0 11 4.12 No 32 0.65 No 0 0 No -32 0.78 Yes 38 83.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 53009651 - NM_001282169 VPS36 1 0.42 0.4 22 10.01 86.01 51 7.28 Yes 54 0.69 No 0 0 No -33 0.53 No 35 65.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 53013301 - NM_001282169 VPS36 1 0.52 0.46 24 -16.93 74.9 16 4.46 No 3 0.63 No 0 0 No -28 0.69 Yes 42 66.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 17105163 + NM_152415 VPS37A 1 0.29 0.19 13 7.93 75.55 28 6.42 Yes 15 1.87 Yes 27 0.96 Yes -27 0.72 Yes 43 91.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 17123279 + NM_152415 VPS37A 1 1.61 1.1 45 7.34 78.14 28 6.57 Yes 15 1.44 Yes 27 0.92 Yes -27 0.95 Yes 43 91.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 17123420 + NM_152415 VPS37A 1 4.3 2.99 67 -0.24 0 41 5.98 Yes 18 0.39 No 0 0 No -29 0.41 No 41 56.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17125782 + NM_152415 VPS37A 1 0.23 0.24 13 5.7 84.43 22 4.96 No 64 1.25 Yes 0 0 No -55 0.44 No 15 77.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 17132284 + NM_152415 VPS37A 1 0.07 0.11 8 8.32 91.97 33 5.83 Yes 60 1.3 Yes 32 0.58 Yes -33 0.5 No 38 57.04 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 17132284 + NM_152415 VPS37A 1 0.07 0.11 8 8.32 91.97 33 5.83 Yes 60 1.3 Yes 32 0.58 Yes -33 0.5 No 38 57.04 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 17137732 + NM_152415 VPS37A 1 0.12 0.13 8 -8.91 0 18 4.12 No 11 0.82 Yes 21 0.8 Yes -34 0.64 No 36 63.27 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 17137901 + NM_152415 VPS37A 1 1.71 1.82 55 3.17 78.07 15 5.06 No 33 0.5 No 0 0 No -41 0.51 No 29 62.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17151227 + NM_152415 VPS37A 1 0.86 0.85 41 7.17 89.4 20 4.8 No 38 1.32 Yes 0 0 No -19 0.9 Yes 51 92.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 17151647 + NM_152415 VPS37A 1 0.95 0.97 40 9.08 89.72 26 6.32 Yes 13 1.92 Yes 0 0 No -25 0.88 Yes 45 94.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 17153843 + NM_152415 VPS37A 1 0.13 0.14 8 4.7 63.51 32 6.78 Yes 19 1.11 Yes 0 0 No -31 0.8 Yes 39 83.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123353106 - NM_024667 VPS37B 1 7.08 7.72 69 4.67 0 36 7.94 Yes 23 1.36 Yes 0 0 No -35 0.78 Yes 35 94.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 123355944 - NM_024667 VPS37B 1 0.96 1.06 35 6.3 81.67 12 4.7 No 62 0.81 Yes 0 0 No -28 0.27 No 51 52.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 123361568 - NM_024667 VPS37B 1 0.14 0.14 8 2.74 82.62 25 5.18 No 12 -2.87 No 0 0 No -24 0.92 Yes 46 82.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 123364053 - NM_024667 VPS37B 1 0.22 0.19 12 10.03 93.47 26 5.08 No -4 0.56 No 0 0 No -26 0.82 Yes 44 63.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 60900975 - NM_017966 VPS37C 1 0.71 0.15 8 8.57 90.33 23 5.92 Yes 76 0.69 No 0 0 No -22 0.95 Yes 48 95.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 60905676 - NM_017966 VPS37C 1 0.76 0.17 11 5.79 74.92 25 4.36 No 9 0.11 No 0 0 No -25 0.81 Yes 45 77.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42453098 - NM_001301138 VPS39 1 1.89 1.97 60 7.18 84.25 18 5.28 No 60 0.5 No 0 0 No -18 0.67 Yes 52 76.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42453789 - NM_001301138 VPS39 1 0.92 0.96 39 6.55 82.74 26 5.66 Yes 66 0.81 Yes 25 0.9 Yes -25 0.93 Yes 45 83.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 42457088 - NM_001301138 VPS39 1 0.35 0.43 24 9.22 92.58 27 5.47 No 14 0.36 No 26 0.93 Yes -26 0.73 Yes 47 53.58 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 42462020 - NM_001301138 VPS39 1 0.15 0.18 11 8.28 82.4 16 7.14 Yes 3 2.29 Yes 0 0 No -31 0.82 Yes 39 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42462091 - NM_001301138 VPS39 1 0.74 0.9 43 5.69 81.91 47 7.13 Yes 34 0.84 Yes 28 0.46 Yes -21 0.34 No 42 40.67 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 42472288 - NM_001301138 VPS39 1 1.12 1.47 55 6.35 88.91 27 5.2 No 74 0.03 No 0 0 No -29 0.34 No 41 41.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 42476859 - NM_001301138 VPS39 1 0.14 0.13 7 5.99 90.16 20 4.58 No 47 1.61 Yes 0 0 No -19 0.72 Yes 48 64.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 42479583 - NM_001301138 VPS39 1 0.15 0.14 7 7.21 92.9 45 5.94 Yes 18 0.22 No 27 0.91 Yes -33 0.6 No 37 69.67 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 42480066 - NM_001301138 VPS39 1 0.13 0.1 7 -5.34 0 26 5.97 Yes 42 0.83 Yes 25 0.87 Yes -25 0.91 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 42481464 - NM_001301138 VPS39 1 0.32 0.33 18 5.36 79.38 28 5.47 No 15 1.28 Yes 0 0 No -27 0.92 Yes 43 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42481567 - NM_001301138 VPS39 1 0.59 0.61 34 5.47 78.51 30 6.29 Yes 17 0.75 No 0 0 No -29 0.75 Yes 41 89.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42483571 - NM_001301138 VPS39 1 0.29 0.25 15 8.27 95.57 40 8.25 Yes 21 1.52 Yes 0 0 No -39 0.75 Yes 31 82.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 42492158 - NM_001301138 VPS39 1 0.17 0.14 7 0.72 85.14 52 7.48 Yes 48 1.57 Yes 0 0 No -51 0.87 Yes 19 94.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 38765680 - NM_014396 VPS41 1 0.66 0.94 44 9.09 90.8 18 9.05 Yes 5 1.52 Yes 0 0 No -33 0.67 Yes 37 80.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 38768035 - NM_014396 VPS41 1 0.49 0.86 38 6.29 81.95 19 4.12 No 54 -3.28 No 28 0.57 Yes -28 0.5 No 42 58.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 38768206 - NM_014396 VPS41 1 0.07 0.13 7 -3.78 58.13 20 4.8 No 28 -3.14 No 23 0.74 Yes -18 0.32 No 60 34.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 38786805 - NM_014396 VPS41 1 0.09 0.1 7 8.63 91.26 31 8.45 Yes 49 1.67 Yes 0 0 No -31 0.51 No 39 60.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 38791667 - NM_014396 VPS41 1 0.36 0.39 18 11.06 92.71 58 7.51 Yes 45 1.54 Yes 0 0 No -57 0.43 No 44 53.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 38793406 - NM_014396 VPS41 1 0.16 0.25 14 9.4 88.5 30 5.83 Yes 17 0.22 No 0 0 No -29 0.65 No 43 65.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 38808917 - NM_014396 VPS41 1 2.3 3.1 65 8.35 76.97 36 5.78 Yes 46 0.4 No 0 0 No -35 0.46 No 35 62.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 38826957 - NM_014396 VPS41 1 0.1 0.13 9 9.36 94.51 31 6.91 Yes 18 1.17 Yes 0 0 No -30 0.55 No 40 71.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 38836127 - NM_014396 VPS41 1 0.73 1.14 45 7.24 67.85 31 6.39 Yes 29 -1.93 No 24 0.75 Yes -30 0.29 No 40 75.73 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 38853778 - NM_014396 VPS41 1 0.19 0.31 16 7.22 81.23 26 3.89 No 32 1.44 Yes 0 0 No -21 0.7 Yes 49 91.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 38857754 - NM_014396 VPS41 1 0.23 0.36 21 10.8 88.91 39 7.22 Yes 26 1.77 Yes 0 0 No -24 0.84 Yes 46 61.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 38870933 - NM_014396 VPS41 1 0.13 0.17 9 7.28 80.52 29 6.5 Yes -4 0.8 Yes 0 0 No -28 0.67 Yes 46 73.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 38902222 - NM_014396 VPS41 1 0.1 0.14 10 -10.06 0 27 5.78 Yes 14 1.47 Yes 0 0 No -26 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 38914427 - NM_014396 VPS41 1 0.33 0.26 14 9.24 81.85 27 6.78 Yes 14 0.72 No 0 0 No -26 0.83 Yes 44 89.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 150057888 + NM_001279353 VPS45 1 0.19 0.14 10 6.94 86.11 16 7.05 Yes 3 2.01 Yes 0 0 No -38 0.48 No 36 61.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 150066637 + NM_001279353 VPS45 1 0.93 0.6 27 6.5 76.76 42 5.32 No 59 0.62 No 0 0 No -29 0.67 Yes 41 62.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 150070951 + NM_001279353 VPS45 1 4.79 2.97 66 9.94 85.15 21 5.65 Yes 8 1.21 Yes 26 0.69 Yes -26 0.7 Yes 50 65.03 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 69348642 + NM_013245 VPS4A 1 0.08 0.14 9 8.03 91.87 25 4.86 No 68 -0.46 No 0 0 No -42 0.52 No 28 74.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 69349914 + NM_013245 VPS4A 1 0.1 0.15 10 -0.36 0 28 5.83 Yes 15 1.5 Yes 0 0 No -27 0.83 Yes 43 82.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 69352555 + NM_013245 VPS4A 1 2.71 4.32 70 7.28 81.95 25 6.18 Yes 12 1.37 Yes 0 0 No -24 0.92 Yes 46 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 69353412 + NM_013245 VPS4A 1 0.09 0.18 11 12.2 86.57 34 6.09 Yes NA NA NA 0 0 No -25 0.42 No 37 62.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 69354991 + NM_013245 VPS4A 1 0.26 0.53 28 -4.73 0 34 5.61 Yes 64 0.12 No 25 0.37 Yes -33 0.61 No 37 39.58 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 69356491 + NM_013245 VPS4A 1 0.05 0.11 8 4.05 68.19 32 6.16 Yes 54 -1.93 No 0 0 No -31 0.87 Yes 39 83.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 69356529 + NM_013245 VPS4A 1 0.09 0.21 13 5.08 84.08 28 3.96 No 4 1.9 Yes 0 0 No -27 0.73 Yes 43 62.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 61059420 - NM_004869 VPS4B 1 0.53 0.83 34 6.46 78.55 23 4.35 No 26 0.27 No 0 0 No -22 0.86 Yes 48 90.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 61088268 - NM_004869 VPS4B 1 0.15 0.25 12 3.97 84.41 55 8.23 Yes 42 1.78 Yes 0 0 No -54 0.87 Yes 16 84.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 92870028 + NM_017667 VPS50 1 0.2 0.14 10 8.02 90.26 34 6.52 Yes 55 1.31 Yes 0 0 No -26 0.48 No 37 55.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 92875414 + NM_017667 VPS50 1 2.24 1.44 51 10.57 93.23 28 6.74 Yes 15 1.88 Yes 27 0.83 Yes -27 0.69 Yes 43 89.17 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 92883175 + NM_017667 VPS50 1 1.13 0.86 34 1.34 79.77 48 7.53 Yes 35 0.53 No 36 0.65 Yes -47 0.57 No 23 69.12 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 92889213 + NM_017667 VPS50 1 0.32 0.14 10 5.47 86.24 44 6.69 Yes 3 1.23 Yes 0 0 No -43 0.59 No 34 63.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 92890028 + NM_017667 VPS50 1 1.46 0.63 32 7.88 84.5 54 5.63 Yes 41 0.63 No 0 0 No -46 0.81 Yes 24 85.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 92904705 + NM_017667 VPS50 1 1.23 1.04 35 10.39 93.04 31 5.73 Yes 18 1.17 Yes 0 0 No -30 0.93 Yes 40 96.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 92923859 + NM_017667 VPS50 1 0.37 0.22 14 3.43 85.49 31 7.76 Yes 18 0.08 No 0 0 No -30 0.84 Yes 40 74.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 92949687 + NM_017667 VPS50 1 3.65 1.79 53 10.26 87.82 33 5.32 No 60 1.39 Yes 35 0.67 Yes -32 0.76 Yes 38 83.42 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 92979190 + NM_017667 VPS50 1 1.19 0.83 43 -0.73 0 36 7.06 Yes 23 0.71 No 22 0.73 Yes -35 0.63 No 35 69.84 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 64874658 + NR_073519 VPS51 1 0.41 0.85 37 4.75 87.27 26 4.74 No 49 -2.85 No 25 0.85 Yes -25 0.73 Yes 45 59.48 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 64877934 + NR_073519 VPS51 1 0.17 0.35 22 7.02 78.31 19 7.16 Yes 6 1.77 Yes 21 0.47 Yes -18 0.8 Yes 52 91.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64878632 + NR_073519 VPS51 1 0.16 0.24 15 10.43 82.83 34 7.28 Yes 21 1.06 Yes 33 0.84 Yes -33 0.87 Yes 37 92.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 64878679 + NR_073519 VPS51 1 0.13 0.18 10 -2.33 68.93 36 7.01 Yes 23 1.53 Yes 0 0 No -35 0.93 Yes 35 92.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 64878918 + NR_073519 VPS51 1 0.66 0.99 43 7.18 82.71 23 5.18 No 72 -3.52 No 0 0 No -23 0.72 Yes 48 44.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 422944 - NM_001128159 VPS53 1 0.98 0.65 31 7.2 78.61 46 7.09 Yes 52 -3.96 No 0 0 No -25 0.85 Yes 45 87.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 429234 - NM_001128159 VPS53 1 0.31 0.24 13 3.27 84.41 38 6.94 Yes 41 1.75 Yes 0 0 No -32 0.69 Yes 38 91.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 465309 - NM_001128159 VPS53 1 0.11 0.11 8 6.98 84.04 25 6.16 Yes 12 0.73 No 0 0 No -24 0.6 No 46 55.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 503335 - NM_001128159 VPS53 1 0.91 0.78 34 5.23 71.75 39 6.56 Yes 26 0.7 No 38 0.52 Yes -38 0.65 No 32 74.89 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 504318 - NM_001128159 VPS53 1 0.23 0.18 10 7.09 93.3 21 4.74 No 54 0.93 Yes 20 0.75 Yes -20 0.64 No 50 64.39 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 526910 - NM_001128159 VPS53 1 0.65 0.56 28 1.42 0 34 5.85 Yes 66 0.69 No 0 0 No -33 0.78 Yes 37 89.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 531465 - NM_001128159 VPS53 1 0.35 0.22 13 -7.3 0 13 4 No 20 0.38 No 0 0 No -32 0.93 Yes 38 82.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 531470 - NM_001128159 VPS53 1 0.19 0.14 9 -2.29 82.06 28 7.18 Yes 15 0.41 No 0 0 No -27 0.94 Yes 43 86.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 536082 - NM_001128159 VPS53 1 3.52 2.69 65 4.53 84.61 29 5.61 Yes 25 -3.48 No 29 0.87 Yes -29 0.51 No 41 87.11 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 560790 - NM_001128159 VPS53 1 0.56 0.4 22 7.25 80.07 29 5.83 Yes 47 -2.71 No 29 0.25 Yes -29 0.68 Yes 41 52.99 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 560901 - NM_001128159 VPS53 1 0.35 0.26 17 6.55 88.74 28 5.39 No 15 0.77 No 0 0 No -22 0.65 No 48 74.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 573128 - NM_001128159 VPS53 1 1.36 0.99 37 12.02 88.27 44 6.04 Yes 31 1.17 Yes 0 0 No -43 0.54 No 27 65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 574048 - NM_001128159 VPS53 1 0.59 0.4 21 7.09 93.17 23 5.13 No 20 1.19 Yes 0 0 No -20 0.48 No 48 62.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 578124 - NM_001128159 VPS53 1 0.28 0.17 9 11.12 85.59 30 5.66 Yes 65 -3.92 No 29 0.42 Yes -23 0.52 No 47 55.84 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 579898 - NM_001128159 VPS53 1 3.14 2.15 56 4.66 74.74 25 5.57 Yes 12 1.13 Yes 0 0 No -24 0.58 No 46 76.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 589246 - NM_001128159 VPS53 1 0.27 0.18 9 11.47 87.82 31 6.46 Yes 36 0.03 No 0 0 No -30 0.69 Yes 40 60.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 598466 - NM_001128159 VPS53 1 0.42 0.29 15 10.89 86.65 28 6.82 Yes 15 0.67 No 0 0 No -27 0.96 Yes 43 96.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 600248 - NM_001128159 VPS53 1 0.3 0.21 10 4 81.18 37 6.22 Yes 24 1.32 Yes 0 0 No -28 0.58 No 42 70.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 600535 - NM_001128159 VPS53 1 0.56 0.39 19 5.53 82.07 21 6.47 Yes 8 0.91 Yes 0 0 No -20 0.61 No 46 77.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 600722 - NM_001128159 VPS53 1 0.24 0.21 13 -8.46 76.95 30 7.01 Yes 5 0.66 No 0 0 No -29 0.7 Yes 41 74.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 605098 - NM_001128159 VPS53 1 0.25 0.32 17 7.04 83.31 26 5.66 Yes 13 0.59 No 0 0 No -25 0.92 Yes 45 94.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 608660 - NM_001128159 VPS53 1 0.17 0.19 9 11.28 95.65 29 6.19 Yes 16 1.35 Yes 0 0 No -28 0.73 Yes 42 86.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 609336 - NM_001128159 VPS53 1 1.46 1.93 53 10.21 82.82 34 5.41 No 75 0.96 Yes 33 0.53 Yes -24 0.46 No 41 45.27 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 612028 - NM_001128159 VPS53 1 0.23 0.29 14 0.38 72.83 27 6.32 Yes 14 1 Yes 0 0 No -26 0.79 Yes 44 76.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64121828 - NM_016516 VPS54 1 0.81 0.29 15 2.52 0 31 5.02 No 39 0.43 No 0 0 No -33 0.54 No 37 80.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 64141060 - NM_016516 VPS54 1 1.31 0.56 29 2.4 78.92 14 5 No 49 0.87 Yes 25 0.67 Yes -21 0.34 No 49 59.1 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 64149715 - NM_016516 VPS54 1 2.09 0.44 26 10.9 83.72 24 4.8 No 39 1.51 Yes 0 0 No -23 0.84 Yes 47 80.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64168348 - NM_016516 VPS54 1 0.23 0.1 7 -5.16 41.91 22 5.11 No 72 -2.48 No 0 0 No -29 0.72 Yes 56 11.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 64169163 - NM_016516 VPS54 1 1.36 0.63 22 6.4 88.76 29 9.66 Yes 16 1.77 Yes 0 0 No -28 0.89 Yes 42 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64174567 - NM_016516 VPS54 1 0.69 0.31 16 2.07 79.15 21 4.69 No 37 1.3 Yes 0 0 No -21 0.63 No 49 48.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 64191317 - NM_016516 VPS54 1 0.21 0.17 10 9.28 79.45 29 7.57 Yes 16 2.32 Yes 0 0 No -28 0.78 Yes 42 85.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64193010 - NM_016516 VPS54 1 1.34 0.57 29 -2.06 62.69 46 6.69 Yes 40 1.14 Yes 0 0 No -32 0.33 No 29 56.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 64193049 - NM_016516 VPS54 1 0.61 0.26 15 5.38 78.23 14 5.26 No 1 1.2 Yes 0 0 No -14 0.43 No 56 68.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 64199377 - NM_016516 VPS54 1 0.51 0.21 13 -6.37 83.69 28 8.9 Yes 71 1.2 Yes 0 0 No -27 0.93 Yes 43 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64200005 - NM_016516 VPS54 1 0.23 0.11 7 8.03 86.92 43 7.91 Yes 30 1.71 Yes 0 0 No -42 0.37 No 28 75.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 64208825 - NM_016516 VPS54 1 7.11 1.72 55 9.43 84.36 30 5.71 Yes 59 1.53 Yes 0 0 No -24 0.83 Yes 46 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 64208980 - NM_016516 VPS54 1 0.77 0.19 10 3.04 0 15 3.87 No 41 0.09 No 0 0 No -35 0.89 Yes 35 94.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 64208986 - NM_016516 VPS54 1 131.02 31.81 72 5.25 72.88 30 5.62 Yes 35 0.1 No 29 0.85 Yes -29 0.94 Yes 41 96.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 64228518 - NM_016516 VPS54 1 1.2 0.32 19 9.73 81.13 26 5.57 Yes 48 -2.2 No 0 0 No -26 0.59 No 44 45.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 151158085 - NM_001271088 VPS72 1 0.1 0.17 11 -3.9 0 15 4.58 No 42 1.85 Yes 0 0 No -30 0.55 No 16 32.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 151158121 - NM_001271088 VPS72 1 0.19 0.31 18 7.53 85.12 19 6.21 Yes 6 1.9 Yes 18 0.64 Yes -30 0.93 Yes 40 94.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 184531532 + NM_015303 VPS8 1 0.43 0.11 8 8.84 92.83 28 5.57 Yes 63 0.86 Yes 27 0.88 Yes -27 0.85 Yes 43 77.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 184533571 + NM_015303 VPS8 1 6.5 1.71 59 10.86 91.54 23 7 Yes 10 1.56 Yes 22 0.82 Yes -22 0.79 Yes 48 88.13 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 184538465 + NM_015303 VPS8 1 0.76 0.25 16 8.24 91.18 18 5.73 Yes 5 1.8 Yes 0 0 No -26 0.75 Yes 47 71.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 184541934 + NM_015303 VPS8 1 0.54 0.15 9 7.21 89.8 17 5.79 Yes 70 0.81 Yes 27 0.18 Yes -27 0.22 No 38 39.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 184542334 + NM_015303 VPS8 1 3.11 0.9 40 -10.17 72.64 46 6.44 Yes 37 1.07 Yes 0 0 No -43 0.59 No 27 63.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 184542718 + NM_015303 VPS8 1 0.49 0.22 14 8.01 94.69 27 4.89 No 55 1.18 Yes 26 0.53 Yes -27 0.63 No 44 62.84 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 184547930 + NM_015303 VPS8 1 0.53 0.25 13 8.46 80.94 32 5.75 Yes 19 1.03 Yes 0 0 No -23 0.66 Yes 39 59.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 184554034 + NM_015303 VPS8 1 0.71 0.19 13 12.48 88.21 20 6.02 Yes 59 -3.47 No 20 0.23 Yes -20 0.43 No 50 56.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 184567481 + NM_015303 VPS8 1 0.69 0.26 16 5.98 88.69 28 5.38 No 19 0.51 No 0 0 No -27 0.95 Yes 43 97.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 184567705 + NM_015303 VPS8 1 0.3 0.11 7 4.47 81.85 16 5.37 No 3 0.44 No 21 0.68 Yes -22 0.6 No 48 48.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 184570294 + NM_015303 VPS8 1 0.25 0.11 8 4.83 0 10 4 No 61 0.39 No 0 0 No -25 0.47 No 44 43.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 184586735 + NM_015303 VPS8 1 0.35 0.11 7 -4.45 79.89 42 6.24 Yes 5 0.9 Yes 25 0.89 Yes -17 0.48 No 53 53.05 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 184588487 + NM_015303 VPS8 1 1.83 0.61 31 5.36 78.8 28 5.1 No 59 0.47 No 23 0.72 Yes -27 0.63 No 43 65.78 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 184588531 + NM_015303 VPS8 1 3.5 1.19 50 6.06 82.85 15 5.48 No 45 0.07 No 0 0 No -32 0.55 No 38 50.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 184600136 + NM_015303 VPS8 1 1.07 0.33 19 9.79 92.14 29 6.84 Yes 3 0.55 No 28 0.58 Yes -28 0.7 Yes 42 82.04 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 184603744 + NM_015303 VPS8 1 3.31 0.93 37 8.27 90.97 28 5.33 No 75 0.45 No 31 0.27 Yes -24 0.72 Yes 46 83.39 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 184612642 + NM_015303 VPS8 1 0.54 0.13 7 3.7 78.63 29 5.02 No 4 0.34 No 0 0 No -28 0.77 Yes 42 89.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 184611021 + NM_015303 VPS8 1 8.38 2.08 65 12.72 91.93 29 5.46 No 55 -2.86 No 32 0.46 Yes -32 0.75 Yes 42 68.04 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 184640216 + NM_015303 VPS8 1 5.19 2.4 62 7.42 71.37 38 7.36 Yes 25 1.17 Yes 22 0.63 Yes -37 0.79 Yes 33 76.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 184648307 + NM_015303 VPS8 1 0.64 0.28 16 4.16 71.47 29 4.89 No 16 0.59 No 0 0 No -28 0.56 No 38 63.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 184661418 + NM_015303 VPS8 1 0.28 0.11 7 7.43 97.52 26 4.75 No 54 0.95 Yes 0 0 No -25 0.66 No 45 45.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 184662279 + NM_015303 VPS8 1 1.31 0.36 19 4.46 74.97 32 5.71 Yes 4 1.42 Yes 0 0 No -31 0.96 Yes 39 98.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 184667742 + NM_015303 VPS8 1 0.42 0.17 10 5.29 82.03 29 5.26 No 2 1.52 Yes 0 0 No -28 0.6 No 42 62.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 184684460 + NM_015303 VPS8 1 0.3 0.11 7 -1.02 80.44 29 6.98 Yes 16 1.46 Yes 0 0 No -28 0.92 Yes 42 89.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89779074 + NR_036480 VPS9D1-AS1 1 0.4 0.18 12 3.75 71.39 9 5.85 Yes 52 1.22 Yes 30 0.57 Yes -28 0.69 Yes 43 68.6 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 89779081 + NR_036480 VPS9D1-AS1 1 3.7 1.63 52 -2.18 0 16 4 No 59 1.23 Yes 30 0.57 Yes -15 0.59 No 55 50.79 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 89779845 + NR_036480 VPS9D1-AS1 1 0.46 0.13 8 5.2 85.02 18 7 Yes 5 1.23 Yes 0 0 No -28 0.62 No 53 73.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 97279281 + NM_003384 VRK1 1 0.11 0.11 8 10.54 96.43 23 4.89 No 16 1.22 Yes 0 0 No -23 0.73 Yes 48 59.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 97298767 + NM_003384 VRK1 1 0.28 0.28 18 5 73.2 42 8.08 Yes 29 0.94 Yes 0 0 No -31 0.91 Yes 39 96.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 97302954 + NM_003384 VRK1 1 0.11 0.21 14 10.76 93.86 22 6.33 Yes 9 1.61 Yes 0 0 No -21 0.97 Yes 49 96.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 97307854 + NM_003384 VRK1 1 0.14 0.35 20 7.02 73.62 39 5.65 Yes 20 0.85 Yes 0 0 No -32 0.88 Yes 38 95.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 97307874 + NM_003384 VRK1 1 0.08 0.19 14 5.43 80.47 30 4.31 No 6 1.23 Yes 0 0 No -22 0.4 No 43 50.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 97314696 + NM_003384 VRK1 1 0.15 0.32 17 6.5 86.56 17 5.92 Yes 4 1.66 Yes 0 0 No -28 0.71 Yes 42 87.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 97319173 + NM_003384 VRK1 1 2.46 4.92 71 4.76 0 9 3.87 No 19 0.74 No 0 0 No -31 0.95 Yes 39 97.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 97320800 + NM_003384 VRK1 1 0.04 0.11 7 6.51 84.13 25 4.98 No 45 -2.08 No 0 0 No -24 0.89 Yes 46 82.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 97326983 + NM_003384 VRK1 1 0.24 0.68 29 4.06 82.67 16 7.14 Yes 3 0.8 Yes 0 0 No -20 0.65 No 50 75.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 97342369 + NM_003384 VRK1 1 5.21 11.97 72 -0.88 63.84 47 6.85 Yes 34 0.76 No 0 0 No -40 0.47 No 30 72.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 97343838 + NM_003384 VRK1 1 0.88 1.83 53 7.7 83.63 90 9.58 Yes 1 0.33 No 32 0.13 Yes -47 0.69 Yes 23 79.85 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 97347492 + NM_003384 VRK1 1 0.37 0.72 33 -2.52 0 15 4.23 No 54 0.53 No 23 0.72 Yes -47 0.78 Yes 23 93.14 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 58284996 + NM_001288838 VRK2 1 0.93 3.49 67 8.64 98.64 25 5.43 No 12 0.71 No 0 0 No -24 0.7 Yes 46 78.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 58285000 + NM_001288838 VRK2 1 0.03 0.11 8 2.52 0 29 5.71 Yes 16 0.69 No 0 0 No -28 0.7 Yes 42 79.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 58285486 + NM_001288838 VRK2 1 1.36 4.88 71 7.56 84.25 33 5.29 No 0 0.54 No 28 0.29 Yes -28 0.35 No 44 35.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 58313464 + NM_001288838 VRK2 1 0.04 0.1 7 -6.45 0 28 6.49 Yes 15 0.53 No 22 0.48 Yes -27 0.49 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 58315481 + NM_001288838 VRK2 1 0.07 0.13 9 3.83 0 11 3.87 No 11 1.1 Yes 0 0 No -23 0.39 No 30 54.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 58365716 + NM_001288838 VRK2 1 0.12 0.26 16 8.94 91.03 30 5.87 Yes 17 0.91 Yes 0 0 No -29 0.7 Yes 41 78.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 58366834 + NM_001288838 VRK2 1 0.07 0.14 9 5.1 70.46 32 5.83 Yes 72 -2.98 No 0 0 No -27 0.7 Yes 43 74.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 58368865 + NM_001288838 VRK2 1 0.29 0.81 40 1.58 75.38 27 5.07 No 14 0.76 No 0 0 No -26 0.7 Yes 44 80.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 58381893 + NM_001288838 VRK2 1 81.05 27.93 72 8.3 0 37 8.51 Yes 30 0.59 No 0 0 No -36 0.81 Yes 34 80.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 50485446 - NM_016440 VRK3 1 29.82 23.38 72 7.14 95.52 32 5.49 No 71 0.78 Yes 31 0.51 Yes -31 0.86 Yes 39 89.52 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 50485446 - NM_016440 VRK3 1 0.27 0.24 15 7.14 95.52 32 5.49 No 71 0.78 Yes 31 0.51 Yes -31 0.86 Yes 39 89.52 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 50490191 - NM_016440 VRK3 1 0.75 0.61 27 3.31 77.77 28 5.38 No 15 0.43 No 27 0.86 Yes -27 0.58 No 48 64.01 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 50512547 - NM_016440 VRK3 1 0.41 0.31 16 8.12 84.46 29 6.52 Yes 16 1.36 Yes 28 0.72 Yes -28 0.86 Yes 42 82.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 50519051 - NM_016440 VRK3 1 0.39 0.31 19 8.33 89.73 26 9.07 Yes 13 1.51 Yes 25 0.92 Yes -25 0.88 Yes 45 93.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 73521581 - NM_022153 VSIR 1 0.6 0.21 13 6.95 84.68 35 6.24 Yes -3 0.46 No 0 0 No -21 0.55 No 49 73.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 142519577 + NM_016485 VTA1 1 0.1 0.21 11 -16.11 0 28 7.92 Yes 30 -3.41 No 0 0 No -28 0.65 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 114208139 + NM_145206 VTI1A 1 4.93 3.83 70 10.65 83.55 53 9.21 Yes 40 0.35 No 37 0.24 Yes -43 0.55 No 27 61.26 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 114208161 + NM_145206 VTI1A 1 0.39 0.31 18 6.73 79.23 25 5.52 No 62 0.35 No 0 0 No -24 0.82 Yes 49 65.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 114208639 + NM_145206 VTI1A 1 8.35 6.36 72 7.83 88.87 56 7.87 Yes 7 1.93 Yes 19 0.81 Yes -55 0.36 No 15 61.09 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 114239166 + NM_145206 VTI1A 1 0.19 0.18 9 1.07 0 60 8.77 Yes 47 2.42 Yes 0 0 No -59 0.88 Yes 11 93.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 114259683 + NM_145206 VTI1A 1 0.3 0.36 23 7.37 80.65 33 7.57 Yes 20 0.88 Yes 0 0 No -32 0.85 Yes 38 88.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 114271028 + NM_145206 VTI1A 1 0.12 0.14 9 13.37 95.1 28 5.83 Yes 15 0.34 No 0 0 No -32 0.79 Yes 38 79.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 114293288 + NM_145206 VTI1A 1 1.06 1.15 51 7.86 82.04 60 8.66 Yes 47 2.07 Yes 28 0.66 Yes -59 0.61 No 11 64.99 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 114452564 + NM_145206 VTI1A 1 0.49 0.35 18 7.51 87.26 23 4.89 No 10 0.64 No 0 0 No -22 0.75 Yes 48 74.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 114456973 + NM_145206 VTI1A 1 0.22 0.15 11 10.95 95.65 51 7.07 Yes 45 0.23 No 0 0 No -43 0.53 No 27 64.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 114488880 + NM_145206 VTI1A 1 0.26 0.17 11 6.25 81.42 30 4.94 No 67 0.44 No 0 0 No -29 0.87 Yes 41 89.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 114496481 + NM_145206 VTI1A 1 5.77 3.93 66 8.98 90.41 25 5.57 Yes 43 -2.5 No 27 0.72 Yes -27 0.93 Yes 43 96.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 114512111 + NM_145206 VTI1A 1 3.63 2.65 61 13.58 95.8 22 6.64 Yes 27 1.86 Yes 0 0 No -39 0.53 No 31 72.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 114519226 + NM_145206 VTI1A 1 0.23 0.17 10 -4.52 76.03 37 6.42 Yes 24 0.5 No 0 0 No -28 0.75 Yes 42 76.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 114519233 + NM_145206 VTI1A 1 0.22 0.17 12 -2.18 0 10 4 No 31 0.48 No 0 0 No -35 0.72 Yes 35 78.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 114527148 + NM_145206 VTI1A 1 0.2 0.15 10 3.8 75.71 28 6.52 Yes 36 1.64 Yes 0 0 No -28 0.46 No 42 71.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 114541936 + NM_145206 VTI1A 1 0.7 0.5 25 6.67 79.36 26 6.16 Yes 13 0.89 Yes 0 0 No -25 0.85 Yes 45 89.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68129250 - NM_006370 VTI1B 1 0.5 0.74 32 2.6 79.42 19 4.58 No 6 0.24 No 0 0 No -29 0.47 No 41 71.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68129908 - NM_006370 VTI1B 1 1.26 1.68 52 7.41 86.27 26 5.47 No 13 0.92 Yes 25 0.81 Yes -25 0.74 Yes 45 76.37 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 42182000 - NM_015058 VWA8 1 0.56 0.25 15 4.77 87.44 26 5.2 No 13 0.91 Yes 0 0 No -25 0.89 Yes 45 90.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42195589 - NM_015058 VWA8 1 0.21 0.1 7 8.61 81.21 28 5.78 Yes 50 -1.38 No 0 0 No -27 0.89 Yes 43 77.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 42263639 - NM_015058 VWA8 1 0.94 0.43 25 -0.24 0 9 3.87 No 11 1.67 Yes 0 0 No -23 0.74 Yes 47 72.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42265576 - NM_015058 VWA8 1 0.48 0.22 13 -0.43 0 9 3.87 No 31 1.61 Yes 0 0 No -24 0.36 No 46 59.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 42265604 - NM_015058 VWA8 1 2.86 1.4 52 9.66 89.71 16 6.05 Yes 3 1.61 Yes 24 0.83 Yes -28 0.88 Yes 42 91.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 42268123 - NM_015058 VWA8 1 0.23 0.11 8 4.32 79.22 39 5.35 No 7 1.24 Yes 0 0 No -31 0.57 No 32 64.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 42283567 - NM_015058 VWA8 1 0.3 0.15 9 9.92 85.65 28 5.34 No 29 0.76 No 0 0 No -32 0.65 No 38 72.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 42308682 - NM_015058 VWA8 1 0.16 0.17 11 1.84 75.39 24 5.62 Yes 67 -6.44 No 0 0 No -31 0.47 No 47 48.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 42350610 - NM_015058 VWA8 1 2.31 1.79 56 6.14 79.44 33 5.99 Yes 42 1.42 Yes 0 0 No -32 0.62 No 47 49.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 42358133 - NM_015058 VWA8 1 0.14 0.1 7 5.89 72.95 16 5.41 No 34 0.24 No 0 0 No -23 0.51 No 39 69.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 42367779 - NM_015058 VWA8 1 1 0.71 36 7.84 88.2 26 6.08 Yes 13 1.31 Yes 0 0 No -25 0.94 Yes 45 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42392996 - NM_015058 VWA8 1 0.49 0.44 19 12.45 91.86 30 5.76 Yes 17 0.4 No 0 0 No -38 0.72 Yes 32 61.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 42393382 - NM_015058 VWA8 1 0.37 0.29 16 -2.01 61.17 42 7.61 Yes 29 1.14 Yes 0 0 No -41 0.6 No 28 81.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 42411387 - NM_015058 VWA8 1 0.7 0.82 35 9.9 89.08 26 5.19 No 68 0.65 No 0 0 No -25 0.85 Yes 45 83.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 42434213 - NM_015058 VWA8 1 0.16 0.18 11 6.41 85.23 22 4.93 No 72 0.78 Yes 0 0 No -21 0.71 Yes 49 79.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42439099 - NM_015058 VWA8 1 0.2 0.21 12 4.3 90.21 15 3.88 No 2 0.83 Yes 0 0 No -26 0.51 No 16 59.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 42439123 - NM_015058 VWA8 1 0.42 0.5 28 4.74 84.41 28 5.55 No 71 0.68 No 0 0 No -30 0.51 No 40 57.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 42443326 - NM_015058 VWA8 1 0.47 0.25 16 9.56 85 27 5.41 No 21 0.28 No 0 0 No -27 0.43 No 44 54.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 42456371 - NM_015058 VWA8 1 1.29 0.63 31 7.69 76.03 35 6.16 Yes 22 0.95 Yes 0 0 No -34 0.86 Yes 36 88.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42456591 - NM_015058 VWA8 1 0.5 0.29 15 4.45 80.01 32 6.85 Yes 61 -2.72 No 0 0 No -31 0.89 Yes 39 89.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 42456907 - NM_015058 VWA8 1 0.54 0.32 17 1.55 76.88 88 9.3 Yes -4 1.08 Yes 0 0 No -22 0.35 No 23 77.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 42481020 - NM_015058 VWA8 1 0.4 0.25 14 9.79 90.05 28 5.83 Yes 53 1.07 Yes 0 0 No -27 0.81 Yes 43 89.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42483729 - NM_015058 VWA8 1 1.09 0.93 41 0.5 82 24 5 No 66 -5.42 No 0 0 No -23 0.89 Yes 47 92.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 42484362 - NM_015058 VWA8 1 0.11 0.1 7 0.78 81.41 24 3.99 No 11 0.97 Yes 0 0 No -23 0.97 Yes 47 97.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 42486299 - NM_015058 VWA8 1 0.29 0.24 13 2.48 0 11 3.87 No 35 0.79 Yes 0 0 No -28 0.78 Yes 29 60.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 42511509 - NM_015058 VWA8 1 1.74 1.43 48 10.52 79.76 32 6.11 Yes 19 1.84 Yes 0 0 No -31 0.65 No 39 89.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 42513723 - NM_015058 VWA8 1 0.57 0.49 28 7.9 88.04 34 4.85 No 21 0.28 No 0 0 No -33 0.85 Yes 37 89.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 42528161 - NM_015058 VWA8 1 3.91 1.51 51 13.78 92.08 25 7.46 Yes 12 1.16 Yes 0 0 No -27 0.32 No 46 56.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 61044914 - NM_152718 VWCE 1 2.02 0.94 35 9.79 88.27 24 7.4 Yes 11 1.47 Yes 0 0 No -23 0.92 Yes 47 94.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 61056109 - NM_152718 VWCE 1 0.24 0.15 10 6.82 91.57 48 6.2 Yes 35 1.11 Yes 0 0 No -18 0.56 No 52 73.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 28823162 + NM_016628 WAC 1 1.01 1.75 56 7.18 89.7 15 5 No 2 1.12 Yes 25 0.52 Yes -18 0.66 No 52 59.78 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 28824838 + NM_016628 WAC 1 0.1 0.28 15 2.35 63.35 32 5.63 Yes 19 1 Yes 21 0.6 Yes -31 0.61 No 39 73.9 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 28826512 + NM_016628 WAC 1 0.16 0.44 22 9.62 93.82 18 4.89 No 5 1.16 Yes 28 0.13 Yes -17 0.74 Yes 53 90.68 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 28827188 + NM_016628 WAC 1 1.26 3.71 70 7.91 94.13 30 5.8 Yes 43 1.26 Yes 0 0 No -29 0.68 Yes 41 81.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 28834476 + NM_016628 WAC 1 0.03 0.1 7 4.98 82.23 24 4.98 No 11 0 No 0 0 No -23 0.91 Yes 47 92.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 28872334 + NM_016628 WAC 1 0.19 0.54 26 -3.55 0 10 3.64 No 22 1.2 Yes 0 0 No -30 0.84 Yes 40 90.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 28878655 + NM_016628 WAC 1 0.12 0.44 24 -5.32 0 25 5.24 No 12 1.11 Yes 23 0.88 Yes -14 0.59 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 28879650 + NM_016628 WAC 1 0.29 1.21 50 0.16 83.57 37 7.92 Yes 29 0.77 Yes 0 0 No -36 0.28 No 34 44.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 28884623 + NM_016628 WAC 1 0.15 0.31 16 1.88 0 28 6.24 Yes 15 1.74 Yes 31 0.55 Yes -27 0.85 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 28897093 + NM_016628 WAC 1 0.05 0.17 10 3.34 0 15 4.58 No 27 1.16 Yes 23 0.78 Yes -39 0.66 Yes 31 72.81 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 28899636 + NM_016628 WAC 1 4.53 14.49 72 2.79 0 12 4.24 No 51 1.17 Yes 30 0.5 Yes -29 0.46 No 49 35.44 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 28899639 + NM_016628 WAC 1 0.58 1.82 56 0.65 0 15 4.58 No 54 1.17 Yes 30 0.5 Yes -25 0.39 No 46 35.8 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 28899938 + NM_016628 WAC 1 0.03 0.1 7 11.46 85.38 18 5.74 Yes 48 0.85 Yes 0 0 No -26 0.35 No 44 71.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 28900183 + NM_016628 WAC 1 0.27 1.04 40 6.74 66.7 59 7.27 Yes 46 1.06 Yes 19 0.72 Yes -31 0.65 No 39 77.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 28904256 + NM_016628 WAC 1 0.16 0.33 21 1.54 68.96 38 7.23 Yes 66 0.83 Yes 0 0 No -33 0.78 Yes 37 88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 28905104 + NM_016628 WAC 1 25.61 56.06 72 3.55 80.92 35 6.35 Yes 6 0.32 No 0 0 No -24 0.8 Yes 46 91.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 28905169 + NM_016628 WAC 1 0.07 0.15 9 -0.43 63.28 28 5.12 No 71 0.28 No 0 0 No -27 0.7 Yes 43 69.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 28813312 - NR_033805 WAC-AS1 1 2.98 0.28 16 5.42 74.53 28 6.74 Yes -2 0.19 No 0 0 No -27 0.47 No 48 61.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 28813504 - NR_033805 WAC-AS1 1 4.35 0.5 26 5.32 72.83 31 5.15 No 54 0.87 Yes 0 0 No -31 0.87 Yes 39 81.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 88205157 - NM_001318328 WAPL 1 0.05 0.11 7 5.14 78.47 17 5.83 Yes 51 0.59 No 0 0 No -32 0.63 No 38 44.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 88251488 - NM_001318328 WAPL 1 0.09 0.22 14 8.58 82.63 25 5.98 Yes 27 1.06 Yes 0 0 No -31 0.53 No 39 55.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 88257077 - NM_001318328 WAPL 1 411.51 157.07 72 5.14 80.62 14 5.2 No 1 0.16 No 28 0.63 Yes -28 0.57 No 48 59.77 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 88257095 - NM_001318328 WAPL 1 3.7 1.43 55 -12.8 0 11 4.11 No 58 0.15 No 28 0.63 Yes -10 0.56 No 60 38.99 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 88265987 - NM_001318328 WAPL 1 0.07 0.14 9 0.32 83.57 43 6.85 Yes 36 1.59 Yes 0 0 No -42 0.78 Yes 28 89.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 88270144 - NM_001318328 WAPL 1 0.1 0.21 12 5.89 86.66 19 5 No 58 1.14 Yes 0 0 No -18 0.54 No 52 79.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 88278423 - NM_001318328 WAPL 1 2.05 1.92 57 4.37 86.8 15 4.93 No 32 1.5 Yes 0 0 No -23 0.72 Yes 49 46.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 100803429 - NM_213645 WARS 1 0.01 0.13 8 3.78 83.18 16 8.09 Yes 3 1.96 Yes 0 0 No -24 0.93 Yes 46 91.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100808464 - NM_213645 WARS 1 0.02 0.21 13 8.83 88.44 49 6.91 Yes 28 0.86 Yes 0 0 No -40 0.58 No 30 50.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 100808824 - NM_213645 WARS 1 0.02 0.17 10 5.49 82.67 34 6 Yes 21 0.64 No 0 0 No -33 0.67 Yes 37 59.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 100817830 - NM_213645 WARS 1 0.06 0.5 25 3.01 0 32 6.53 Yes 19 0.83 Yes 0 0 No -31 0.32 No 34 49.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 100817834 - NM_213645 WARS 1 0.01 0.14 8 2.3 84.41 28 6.22 Yes 15 0.85 Yes 0 0 No -30 0.33 No 38 46.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 100819458 - NM_213645 WARS 1 0.11 1.26 42 5.42 81.35 37 6.18 Yes 72 -3.58 No 25 0.52 Yes -37 0.73 Yes 33 60.4 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 100820231 - NM_213645 WARS 1 0.01 0.19 9 -16.48 0 10 4 No 62 -2.14 No 26 0.87 Yes -37 0.26 No 27 49.8 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 100820902 - NM_213645 WARS 1 0.12 1.35 50 1.41 83.86 33 6.85 Yes 20 0.88 Yes 0 0 No -32 0.93 Yes 38 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100828165 - NM_213645 WARS 1 0.48 0.21 13 5.55 87.32 13 4.98 No 0 1.87 Yes 0 0 No -19 0.8 Yes 51 58.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 100835559 - NM_213645 WARS 1 1.56 0.65 30 5.06 88.16 33 5.53 No 68 2.34 Yes 0 0 No -32 0.47 No 50 69.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 100835596 - NM_213645 WARS 1 568.66 230.26 72 6.8 74.18 44 8.25 Yes 31 2.31 Yes 43 0.53 Yes -43 0.92 Yes 27 96.2 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 100837107 - NM_213645 WARS 1 0.33 0.14 8 9.48 86.44 28 6.24 Yes 15 1.39 Yes 0 0 No -27 0.91 Yes 43 95.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100840402 - NM_213645 WARS 1 3.45 1.26 46 2.43 77.8 13 5.09 No 75 0.8 Yes 20 0.56 Yes -20 0.31 No 48 62.77 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 100840582 - NM_213645 WARS 1 11.83 4.57 36 8.33 86.92 24 5.29 No 29 0.97 Yes 23 0.94 Yes -23 0.62 No 47 73.14 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 100840603 - NM_213645 WARS 1 2.32 0.96 30 10.06 94.16 21 6.29 Yes 8 1.01 Yes 30 0.89 Yes -20 0.54 No 49 63.6 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 100841688 - NM_213645 WARS 1 10.39 3.96 62 4.9 82.87 23 5.29 No 46 -4.37 No 21 0.59 Yes -22 0.83 Yes 48 57.63 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 100841741 - NM_213645 WARS 1 1.05 0.39 23 0.45 86.27 21 5 No 53 -3.85 No 24 0.53 Yes -21 0.67 Yes 49 31.92 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 100841744 - NM_213645 WARS 1 43.33 17.39 72 3.89 89 18 4.69 No 50 -3.85 No 24 0.53 Yes -18 0.54 No 52 42.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 100841884 - NM_213645 WARS 1 4.87 2.08 50 7.09 82.01 36 5.07 No 37 1.2 Yes 23 0.93 Yes -24 0.79 Yes 46 79.69 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 48544150 + NM_000377 WAS 1 0.08 0.11 7 3.22 79.11 21 4.25 No -2 0.34 No 19 0.58 Yes -21 0.51 No 49 46.46 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 48546707 + NM_000377 WAS 1 0.28 0.58 30 0.86 70.82 17 5.25 No 48 0.71 No 0 0 No -60 0.49 No 10 41.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 48547204 + NM_000377 WAS 1 1.03 0.97 46 5.78 81.24 85 9 Yes 72 0.21 No 0 0 No -25 0.78 Yes 45 78.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 48548539 + NM_000377 WAS 1 6.57 8.74 72 6.48 92.91 33 6.72 Yes 15 1.22 Yes 0 0 No -27 0.68 Yes 38 59.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 27771232 - NM_006990 WASF2 1 0.04 0.11 7 6.58 68.11 29 6.34 Yes 16 1.46 Yes 0 0 No -28 0.89 Yes 42 87.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27793340 - NM_006990 WASF2 1 0.09 0.21 13 8.43 92.81 15 4.25 No 2 1.68 Yes 0 0 No -21 0.78 Yes 49 65.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 27811153 - NM_006990 WASF2 1 0.07 0.17 11 6.77 85.02 23 7.35 Yes 10 1.33 Yes 0 0 No -22 0.93 Yes 48 93.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 114354982 + NR_024077 WASH2P 1 0.52 0.18 12 5.77 88.74 17 5.28 No 4 1.08 Yes 0 0 No -26 0.92 Yes 44 84.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 114355067 + NR_024077 WASH2P 1 0.35 0.17 10 1.32 0 50 7.28 Yes 37 1.28 Yes 0 0 No -49 0.81 Yes 21 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 102506724 + NR_003659 WASH3P 1 4.01 0.18 10 9.2 87.72 15 6 Yes 36 1.38 Yes 22 0.66 Yes -29 0.33 No 41 60.33 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 102507545 + NR_003659 WASH3P 1 3.09 0.21 11 6.17 89.42 26 5.14 No 13 0.41 No 0 0 No -25 0.59 No 45 57.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 102512610 + NR_003659 WASH3P 1 2.21 0.15 9 9.05 87.19 28 5.7 Yes 15 0.57 No 27 0.9 Yes -27 0.93 Yes 43 93.69 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 102512785 + NR_003659 WASH3P 1 40 2.6 63 8.67 89.64 17 5.74 Yes 4 0.92 Yes 26 0.67 Yes -31 0.63 No 45 50.83 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 102512795 + NR_003659 WASH3P 1 4.42 0.22 14 -4.17 0 18 4.36 No 14 0.92 Yes 26 0.67 Yes -17 0.54 No 44 62.95 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 51829350 + NM_001005751 WASHC2A 1 1.4 0.79 34 4.79 73.25 19 4.8 No 62 0.51 No 0 0 No -18 0.95 Yes 52 96.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 51835192 + NM_001005751 WASHC2A 1 0.22 0.15 10 3.92 0 25 10.01 Yes 52 1.36 Yes 0 0 No -31 0.54 No 46 75.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 51845259 + NM_001005751 WASHC2A 1 1.25 0.38 19 1.35 73.9 27 7.84 Yes 14 1.99 Yes 0 0 No -26 0.82 Yes 44 87.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 51869866 + NM_001005751 WASHC2A 1 0.32 0.18 10 -1.75 0 9 3.35 No 15 0.23 No 0 0 No -27 0.8 Yes 43 75.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 51869887 + NM_001005751 WASHC2A 1 0.28 0.15 10 6.18 86.85 30 5.29 No 36 0.24 No 0 0 No -26 0.31 No 44 42.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 46224318 + NM_001330074 WASHC2C 1 0.24 0.15 11 -3.25 0 16 4.21 No 27 0.52 No 0 0 No -34 0.67 Yes 36 90.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 46224353 + NM_001330074 WASHC2C 1 3.62 2.25 59 4.79 73.25 19 4.8 No 62 0.51 No 0 0 No -18 0.95 Yes 52 96.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 46240271 + NM_001330074 WASHC2C 1 2.12 0.58 30 1.35 73.9 27 7.84 Yes 14 1.99 Yes 0 0 No -26 0.82 Yes 44 87.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 46254779 + NM_001330074 WASHC2C 1 0.39 0.15 8 6.67 86.41 15 4.84 No 63 2.16 Yes 0 0 No -23 0.39 No 47 24.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 46259096 + NM_001330074 WASHC2C 1 0.99 0.58 28 9.1 92.52 28 6.47 Yes 15 0.23 No 0 0 No -27 0.54 No 43 78.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 46264902 + NM_001330074 WASHC2C 1 0.44 0.24 14 -1.75 0 9 3.35 No 15 0.23 No 22 0.53 Yes -27 0.8 Yes 43 75.89 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 46267070 + NM_001330074 WASHC2C 1 0.21 0.14 8 8.33 86.58 23 5.58 Yes 44 1.3 Yes 0 0 No -26 0.44 No 45 77.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 46267090 + NM_001330074 WASHC2C 1 1.29 0.61 28 8.43 90.93 23 5.39 No 64 1.31 Yes 0 0 No -22 0.79 Yes 48 87.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102411584 - NM_001301107 WASHC3 1 1.53 2.4 65 1.23 71.54 31 9.69 Yes 18 0.23 No 24 0.65 Yes -30 0.49 No 33 51.64 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 102413150 - NM_001301107 WASHC3 1 0.12 0.19 12 2 64.37 31 7.37 Yes 18 0.05 No 31 0.68 Yes -31 0.84 Yes 39 55.93 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 102417581 - NM_001301107 WASHC3 1 0.19 0.28 16 7.54 85.28 22 4.33 No 2 0.77 Yes 0 0 No -21 0.5 No 49 57.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 102433757 - NM_001301107 WASHC3 1 566.49 163.57 72 4.91 81.41 28 5.07 No 45 0.47 No 27 0.79 Yes -27 0.62 No 50 82.99 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 102433781 - NM_001301107 WASHC3 1 1.42 0.33 20 3.44 70.72 34 5.63 Yes 21 0.47 No 27 0.79 Yes -24 0.47 No 37 46.59 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 102435801 - NM_001301107 WASHC3 1 0.39 0.13 8 7.79 92.08 24 6.56 Yes 11 1.4 Yes 0 0 No -23 0.91 Yes 47 93.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 102444070 - NM_001301107 WASHC3 1 1.49 2.39 62 6.63 93.66 32 7.02 Yes 19 0.48 No 27 0.77 Yes -31 0.44 No 39 84.91 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 102444070 - NM_001301107 WASHC3 1 0.29 0.49 24 6.63 93.66 32 7.02 Yes 19 0.48 No 27 0.77 Yes -31 0.44 No 39 84.91 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 102444418 - NM_001301107 WASHC3 1 0.53 0.75 35 3.48 77.66 30 7.65 Yes 17 1.05 Yes 32 0.67 Yes -32 0.36 No 38 69.51 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 102453569 - NM_001301107 WASHC3 1 0.13 0.22 12 7.58 87.68 35 4.67 No 9 1.06 Yes 21 0.83 Yes -21 0.83 Yes 49 74.23 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 105509444 + NM_001293640 WASHC4 1 0.12 0.21 12 1.17 0 11 3.87 No 10 0.65 No 0 0 No -26 0.9 Yes 44 88.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105510224 + NM_001293640 WASHC4 1 0.3 0.64 28 6.32 87.03 42 6.43 Yes 29 0.69 No 0 0 No -23 0.74 Yes 47 92.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105514866 + NM_001293640 WASHC4 1 6.04 11.06 72 2 69.87 29 4.37 No 53 0.29 No 28 0.95 Yes -28 0.75 Yes 42 65.84 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 105516337 + NM_001293640 WASHC4 1 0.86 1.31 47 7.91 87.4 52 6.82 Yes 75 -3.05 No 0 0 No -29 0.74 Yes 46 79.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105520015 + NM_001293640 WASHC4 1 0.29 0.42 25 -15.67 65.91 51 5.88 Yes 34 0.24 No 0 0 No -40 0.35 No 24 69.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105532807 + NM_001293640 WASHC4 1 0.08 0.13 7 10.95 85.99 26 4.44 No 25 1.42 Yes 0 0 No -25 0.8 Yes 45 88.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 105534681 + NM_001293640 WASHC4 1 0.13 0.18 12 -3.55 0 32 5.92 Yes 45 1.18 Yes 0 0 No -32 0.47 No 40 47.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 105536295 + NM_001293640 WASHC4 1 0.11 0.19 13 7.54 72.23 24 5.46 No 36 1.25 Yes 0 0 No -48 0.59 No 47 63.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 105536915 + NM_001293640 WASHC4 1 0.16 0.25 12 0.47 0 14 4.47 No 24 0.53 No 0 0 No -36 0.59 No 34 68.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105538133 + NM_001293640 WASHC4 1 0.06 0.1 7 5.86 70.81 26 6.4 Yes 62 -2.94 No 0 0 No -25 0.58 No 44 69.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105541387 + NM_001293640 WASHC4 1 0.83 1.6 52 4.98 76.07 23 5.28 No 44 1.06 Yes 26 0.89 Yes -26 0.72 Yes 44 94.03 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 105542843 + NM_001293640 WASHC4 1 0.26 0.54 30 8.1 74.03 49 5.69 Yes 33 0.5 No 0 0 No -36 0.56 No 34 58.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 105543499 + NM_001293640 WASHC4 1 0.37 0.78 33 5.85 89.55 24 4.52 No 11 0.01 No 0 0 No -23 0.81 Yes 47 84.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105546134 + NM_001293640 WASHC4 1 0.06 0.11 7 2.58 80.21 17 4.8 No 17 0.28 No 0 0 No -41 0.83 Yes 40 54.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 105548365 + NM_001293640 WASHC4 1 2.06 2.61 67 9.26 84.59 46 6.76 Yes -3 0.3 No 0 0 No -33 0.79 Yes 37 87.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105548395 + NM_001293640 WASHC4 1 0.21 0.24 15 3.12 70.94 25 5.1 No 27 0.52 No 0 0 No -24 0.95 Yes 46 97.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 105548839 + NM_001293640 WASHC4 1 0.61 0.72 35 6.59 79.45 34 8.41 Yes 21 1.65 Yes 0 0 No -33 0.75 Yes 37 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 105548887 + NM_001293640 WASHC4 1 2.34 2.92 66 3.5 85.77 38 4.09 No 69 1.62 Yes 25 0.45 Yes -31 0.33 No 39 37.61 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 105557870 + NM_001293640 WASHC4 1 0.09 0.11 8 5.27 69.97 19 6.53 Yes 6 0.12 No 25 0.91 Yes -18 0.84 Yes 52 66.64 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 105558450 + NM_001293640 WASHC4 1 1.13 1.82 57 4.28 78.92 39 5.13 No -3 0.63 No 25 0.6 Yes -34 0.71 Yes 36 91.16 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 105560292 + NM_001293640 WASHC4 1 1.36 1.65 54 5.19 85.83 34 6.56 Yes 8 1.12 Yes 0 0 No -21 0.66 Yes 37 66.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 105560644 + NM_001293640 WASHC4 1 1.59 1.96 60 0.53 70.82 80 8.68 Yes 67 0.82 Yes 0 0 No -29 0.69 Yes 41 58.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 126040946 - NM_014846 WASHC5 1 0.12 0.11 8 0.19 0 28 4.46 No 10 1.04 Yes 0 0 No -31 0.5 No 43 72.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 126044824 - NM_014846 WASHC5 1 0.38 0.29 18 5.81 85.9 29 6.24 Yes 16 1.8 Yes 0 0 No -28 0.79 Yes 42 86.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 126048463 - NM_014846 WASHC5 1 1.39 1.19 49 12.38 94.38 21 6.18 Yes 8 1.12 Yes 0 0 No -20 0.53 No 50 44.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 126049089 - NM_014846 WASHC5 1 0.17 0.13 8 4.79 85.02 19 7.07 Yes 6 1.2 Yes 0 0 No -18 0.57 No 52 52.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 126051219 - NM_014846 WASHC5 1 0.59 0.69 35 9.33 92.25 15 6.74 Yes 2 1.83 Yes 25 0.8 Yes -26 0.34 No 52 56.6 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 126054256 - NM_014846 WASHC5 1 1.35 0.97 37 8.53 90.29 20 6.36 Yes 7 1.81 Yes 0 0 No -24 0.49 No 46 49.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 126064097 - NM_014846 WASHC5 1 0.62 0.33 17 5.41 90.92 28 4.25 No 3 0.8 Yes 0 0 No -27 0.65 No 43 59.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 126096019 - NM_014846 WASHC5 1 0.22 0.13 7 9.51 86.03 23 5.2 No 43 1.34 Yes 22 0.83 Yes -22 0.7 Yes 48 70.96 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 126103640 - NM_014846 WASHC5 1 0.9 0.46 24 10.12 84.19 28 6.65 Yes 48 1.23 Yes 0 0 No -27 0.77 Yes 43 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 123334939 - NM_003941 WASL 1 0.5 0.17 9 -4.3 0 12 4 No 26 0.05 No 21 0.9 Yes -28 0.46 No 26 49.86 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 14947602 - NM_016312 WBP11 1 0.03 0.13 9 7.15 83.16 48 7.49 Yes 61 0.62 No 0 0 No -30 0.57 No 40 68.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 14949936 - NM_016312 WBP11 1 0.03 0.11 7 -2.84 81.36 21 5.24 No 8 1.05 Yes 0 0 No -29 0.43 No 41 59.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 14954339 - NM_016312 WBP11 1 0.05 0.11 7 -0.82 63.37 29 5.74 Yes 16 0.68 No 0 0 No -28 0.9 Yes 42 95.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 14954880 - NM_016312 WBP11 1 0.1 0.21 11 -0.99 0 13 3.99 No 0 0.4 No 0 0 No -12 0.33 No 52 51.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 14954967 - NM_016312 WBP11 1 0.08 0.17 11 6.49 77.55 24 6.08 Yes 11 0.89 Yes 23 0.86 Yes -23 0.84 Yes 47 88.91 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 104556930 + NM_001083913 WBP1L 1 0.74 0.19 10 10.63 83.91 35 5.92 Yes 58 0.66 No 0 0 No -34 0.79 Yes 36 56.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 104572090 + NM_001083913 WBP1L 1 0.94 0.56 29 8.75 85.25 25 8 Yes 12 1.48 Yes 0 0 No -24 0.82 Yes 46 86.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 73848902 - NM_001348170 WBP2 1 0.07 0.11 8 6.79 86.59 27 5.07 No 26 0.27 No 26 0.64 Yes -19 0.67 Yes 51 82.84 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 41656843 + NM_007187 WBP4 1 0.19 0.11 8 -7.91 0 18 5.59 Yes 5 1.22 Yes 0 0 No -23 0.53 No 39 38.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 41656895 + NM_007187 WBP4 1 0.63 0.35 20 4.57 80.47 25 4.95 No 57 1.2 Yes 0 0 No -24 0.89 Yes 46 82.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 73110735 + NR_037776 WBSCR22 1 0.14 0.33 19 8.59 77.51 18 6.24 Yes 74 0.88 Yes 27 0.49 Yes -27 0.4 No 43 66.59 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 73111685 + NR_037776 WBSCR22 1 0.29 0.72 34 5.6 74.67 16 5.29 No 41 1.05 Yes 0 0 No -19 0.38 No 46 23.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 73111795 + NR_037776 WBSCR22 1 0.51 1.26 44 4.04 75.02 23 5.2 No 26 -2.64 No 22 0.76 Yes -22 0.53 No 50 58.75 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 24261921 - NM_025203 WDCP 1 0.38 0.13 8 6.29 82.1 52 7.11 Yes 11 1.82 Yes 0 0 No -23 0.78 Yes 47 79.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 224744971 - NM_020830 WDFY1 1 0.14 0.22 14 -1.08 0 15 4.47 No 35 0.51 No 23 0.83 Yes -18 0.78 Yes 52 75.55 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 224760344 - NM_020830 WDFY1 1 0.11 0.15 9 -1.5 0 68 7.89 Yes 55 1.63 Yes 0 0 No -55 0.52 No 20 62.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 52160160 + NM_052950 WDFY2 1 8.12 1.35 51 8.88 85.7 60 6.76 Yes 5 0.98 Yes 0 0 No -34 0.54 No 36 32.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 52225034 + NM_052950 WDFY2 1 0.62 0.13 9 8.85 88.97 32 7.22 Yes 19 1.13 Yes 0 0 No -31 0.88 Yes 39 85.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 52301808 + NM_052950 WDFY2 1 1.62 0.47 30 -2.29 0 31 4.53 No -2 1.21 Yes 29 0.52 Yes -10 0.73 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 52301809 + NM_052950 WDFY2 1 1.34 0.4 19 -6.99 0 32 4.59 No -1 1.19 Yes 29 0.52 Yes -11 0.35 No NA NA NA BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 52326998 + NM_052950 WDFY2 1 5.21 0.83 34 5.74 81.99 22 5.29 No 9 0.82 Yes 21 0.73 Yes -21 0.61 No 49 72.8 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 49893868 + NM_020945 WDFY4 1 1.45 0.33 18 4.49 73.22 22 4.89 No 61 0.68 No 0 0 No -21 0.87 Yes 49 72.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 49900316 + NM_020945 WDFY4 1 33.04 7.56 72 8.09 82.94 25 5.38 No 76 -3.72 No 0 0 No -24 0.78 Yes 46 71.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 49920386 + NM_020945 WDFY4 1 0.79 1.18 46 5.54 86.87 23 5.72 Yes 1 0.5 No 0 0 No -25 0.44 No 48 65.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 49932227 + NM_020945 WDFY4 1 1.62 1.76 59 3.87 0 10 4 No 14 1.24 Yes 0 0 No -26 0.59 No 44 69.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 49933955 + NM_020945 WDFY4 1 0.1 0.13 8 1.3 0 9 4.36 No 56 2.03 Yes 0 0 No -54 0.81 Yes 16 85.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 49934227 + NM_020945 WDFY4 1 0.05 0.11 7 5.39 78.35 22 5.28 No 29 0.48 No 0 0 No -25 0.88 Yes 45 84.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 49943898 + NM_020945 WDFY4 1 0.14 0.28 17 5.69 70.86 20 5.1 No 15 0.36 No 28 0.64 Yes -27 0.72 Yes 43 43.99 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 49943935 + NM_020945 WDFY4 1 0.27 0.58 29 1.28 0 20 4.47 No 52 0.67 No 0 0 No -19 0.81 Yes 31 47.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 49983760 + NM_020945 WDFY4 1 0.14 0.24 13 1.69 0 43 7.15 Yes 30 0.6 No 0 0 No -32 0.85 Yes 38 87.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 49985492 + NM_020945 WDFY4 1 0.09 0.15 10 6.94 74.39 20 6.04 Yes 37 0.59 No 0 0 No -31 0.61 No 39 75.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 49986614 + NM_020945 WDFY4 1 0.22 0.35 19 3.74 81.18 25 4.69 No 63 -5.5 No 25 0.91 Yes -24 0.61 No 46 68.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 49986815 + NM_020945 WDFY4 1 0.1 0.18 10 3.99 84.78 29 5.89 Yes 16 1.06 Yes 0 0 No -28 0.84 Yes 42 83.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 49990323 + NM_020945 WDFY4 1 0.55 1.03 41 10.09 89.23 30 4.14 No 17 1.15 Yes 0 0 No -29 0.74 Yes 41 81.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 49994053 + NM_020945 WDFY4 1 0.05 0.1 7 9.15 82.34 29 7.16 Yes 32 0.74 No 0 0 No -28 0.36 No 39 51.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 49996560 + NM_020945 WDFY4 1 0.1 0.24 12 -5.08 0 20 4.58 No 75 0.62 No 18 0.47 Yes -49 0.43 No 51 29.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 49996613 + NM_020945 WDFY4 1 0.41 0.83 37 5.36 85.98 22 5.19 No 9 0.32 No 0 0 No -21 0.5 No 49 61.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 50011306 + NM_020945 WDFY4 1 0.12 0.19 11 8.11 75.78 51 6.45 Yes 38 2.45 Yes 26 0.85 Yes -36 0.43 No 44 66.54 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 50013951 + NM_020945 WDFY4 1 0.11 0.14 9 9.55 84.39 29 6.56 Yes 3 0.66 No 0 0 No -28 0.38 No 42 69.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 50016333 + NM_020945 WDFY4 1 2.82 3 65 5.73 84.07 25 6.44 Yes 46 0.88 Yes 0 0 No -24 0.77 Yes 46 87.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50018632 + NM_020945 WDFY4 1 0.48 0.5 27 8.03 91.41 24 7.32 Yes 11 1.76 Yes 0 0 No -23 0.93 Yes 47 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50020260 + NM_020945 WDFY4 1 0.07 0.11 7 2.11 0 58 6.52 Yes 61 1.6 Yes 0 0 No -57 0.89 Yes 13 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50025299 + NM_020945 WDFY4 1 0.49 0.6 33 2.72 0 13 4.36 No 14 1.14 Yes 0 0 No -26 0.68 Yes 44 90.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50025382 + NM_020945 WDFY4 1 0.6 0.75 41 8.5 80.53 28 5.81 Yes 15 0.97 Yes 0 0 No -27 0.95 Yes 43 93.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50031226 + NM_020945 WDFY4 1 4.48 4.99 69 9.04 88.27 24 5.1 No 11 0.44 No 23 0.87 Yes -23 0.9 Yes 47 77.42 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 50034805 + NM_020945 WDFY4 1 1.7 1.83 57 2.89 69.08 27 4.86 No 71 0.54 No 0 0 No -30 0.56 No 43 53.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 50034862 + NM_020945 WDFY4 1 0.83 0.92 45 6.64 88.36 22 5.29 No 71 0.22 No 0 0 No -21 0.92 Yes 49 89.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 50081537 + NM_020945 WDFY4 1 0.23 0.35 18 0.57 78.5 23 5.92 Yes 10 1.53 Yes 0 0 No -22 0.76 Yes 48 81.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50086043 + NM_020945 WDFY4 1 0.09 0.15 8 2.51 72.97 28 7.46 Yes -1 1.07 Yes 0 0 No -27 0.78 Yes 43 77.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50086526 + NM_020945 WDFY4 1 0.16 0.24 14 9.24 91.76 25 5.12 No 42 0.02 No 24 0.85 Yes -24 0.89 Yes 46 92.02 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 50086660 + NM_020945 WDFY4 1 0.12 0.19 10 8.44 88.09 17 5.46 No 4 0.5 No 0 0 No -23 0.52 No 48 61.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 50088359 + NM_020945 WDFY4 1 0.11 0.17 11 8.09 81.18 31 5.91 Yes 0 1.45 Yes 0 0 No -30 0.93 Yes 40 92.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50109866 + NM_020945 WDFY4 1 0.21 0.39 19 5.81 84.92 28 5.48 No 38 1.65 Yes 0 0 No -27 0.87 Yes 43 87.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 50151375 + NM_020945 WDFY4 1 0.08 0.13 8 -13.63 0 27 7.22 Yes 60 -1.67 No 0 0 No -26 0.55 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 50151379 + NM_020945 WDFY4 1 0.07 0.14 9 -3.7 0 31 7.48 Yes 64 -1.68 No 0 0 No -39 0.42 No 31 53.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 50177110 + NM_020945 WDFY4 1 0.08 0.1 7 -16.67 0 15 5.91 Yes 65 1.4 Yes 0 0 No -14 0.62 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 50177129 + NM_020945 WDFY4 1 5.16 5.6 71 9.34 87.11 15 5.48 No 21 1.05 Yes 0 0 No -33 0.59 No 37 51.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 50177195 + NM_020945 WDFY4 1 0.24 0.28 17 2.59 76.93 22 5 No 50 -1.22 No 0 0 No -21 0.77 Yes 49 69.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 50184827 + NM_020945 WDFY4 1 0.3 0.29 17 -9.79 0 14 4.24 No 68 -5.07 No 21 0.88 Yes -13 0.41 No 47 29.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 50190734 + NM_020945 WDFY4 1 1.8 1.83 54 8.59 82.7 20 5.1 No 32 1.11 Yes 19 0.26 Yes -19 0.42 No 51 50.17 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 50190764 + NM_020945 WDFY4 1 0.22 0.24 14 1.7 74.42 26 5.2 No 62 1.09 Yes 0 0 No -25 0.94 Yes 45 75.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55411115 - NM_007086 WDHD1 1 0.4 0.39 22 7.9 87.58 31 6.35 Yes 6 1.31 Yes 0 0 No -30 0.65 No 40 79.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 55424348 - NM_007086 WDHD1 1 6.32 7.81 72 -2.95 0 11 3.87 No 75 0.22 No 0 0 No -31 0.91 Yes 39 86.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 55428942 - NM_007086 WDHD1 1 0.14 0.15 9 6.17 71.57 25 6.76 Yes 12 0.89 Yes 0 0 No -24 0.82 Yes 46 84.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55429566 - NM_007086 WDHD1 1 0.37 0.42 22 3.02 0 9 3.87 No 11 0.67 No 0 0 No -27 0.76 Yes 43 57.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 55434096 - NM_007086 WDHD1 1 0.14 0.15 8 5.48 81.37 22 5.1 No 9 1.29 Yes 0 0 No -21 0.72 Yes 49 89.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55445540 - NM_007086 WDHD1 1 0.19 0.25 12 8.6 88.98 44 7.42 Yes 31 1.06 Yes 0 0 No -43 0.73 Yes 27 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55459466 - NM_007086 WDHD1 1 0.22 0.18 11 6.66 86.87 19 7.07 Yes 6 1.11 Yes 0 0 No -23 0.56 No 47 69.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 55462420 - NM_007086 WDHD1 1 2.97 2.58 61 7.26 85.78 22 5.29 No 69 0.76 No 0 0 No -21 0.61 No 44 71.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 55471956 - NM_007086 WDHD1 1 1.11 0.88 38 7.46 82.3 31 7.15 Yes 18 1.53 Yes 0 0 No -30 0.87 Yes 40 91.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 55487806 - NM_007086 WDHD1 1 0.29 0.17 10 7.57 81.24 16 4.52 No 3 0.71 No 0 0 No -27 0.64 No 43 63.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 55493518 - NM_007086 WDHD1 1 1.47 0.58 28 1.52 0 35 6.08 Yes 68 1.66 Yes 0 0 No -34 0.28 No 39 49.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 63587212 - NM_015910 WDPCP 1 15.14 0.69 31 7.88 87.82 22 4.81 No 35 0.97 Yes 24 0.75 Yes -24 0.8 Yes 46 85.43 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 63596594 - NM_015910 WDPCP 1 2.61 0.14 9 5.61 82.79 52 6.13 Yes 22 1.68 Yes 34 0.68 Yes -35 0.67 Yes 36 63.35 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 63622598 - NM_015910 WDPCP 1 1.65 0.11 8 8.79 86.49 26 5.96 Yes 44 -2.51 No 0 0 No -22 0.3 No 54 44.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 63665758 - NM_015910 WDPCP 1 4.66 0.58 29 11.71 93.04 27 5.74 Yes 14 0.44 No 0 0 No -23 0.54 No 44 60.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 63666990 - NM_015910 WDPCP 1 3.33 0.28 16 7.81 94.67 19 5 No 16 1.19 Yes 44 0.47 Yes -28 0.62 No 42 82.24 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 63691836 - NM_015910 WDPCP 1 4.54 0.32 19 9.32 98.06 25 5.29 No 64 1.68 Yes 0 0 No -24 0.76 Yes 46 79.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 63719746 - NM_015910 WDPCP 1 2.69 0.29 16 6.81 81.3 34 5.96 Yes 21 0.71 No 0 0 No -28 0.89 Yes 42 82.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 10077493 - NM_017491 WDR1 1 0.01 0.13 8 8.11 79.05 32 6.41 Yes 9 0.62 No 0 0 No -31 0.85 Yes 39 92.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 10078811 - NM_017491 WDR1 1 0.07 0.74 32 4.72 81.37 21 4.9 No 42 0.82 Yes 20 0.95 Yes -20 0.88 Yes 50 91.08 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 10079070 - NM_017491 WDR1 1 0.03 0.26 13 -14.16 63.05 39 8.57 Yes 26 2.07 Yes 0 0 No -38 0.8 Yes 32 88.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 10080664 - NM_017491 WDR1 1 0.14 0.96 44 4.75 83.71 18 4.9 No 5 0.64 No 24 0.97 Yes -23 0.48 No 46 56.74 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 10082484 - NM_017491 WDR1 1 0.15 0.96 43 10.94 89.13 25 6.14 Yes 12 0.9 Yes 0 0 No -24 0.89 Yes 46 92.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 10084436 - NM_017491 WDR1 1 0.01 0.11 7 7.45 84.49 17 6.08 Yes 4 1.31 Yes 0 0 No -16 0.32 No 51 50.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 10089560 - NM_017491 WDR1 1 0.06 0.53 27 -0.48 0 29 7.14 Yes 16 0.61 No 23 0.78 Yes -28 0.52 No 42 60.82 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr4 10089996 - NM_017491 WDR1 1 0.04 0.31 17 -17.52 0 29 7.05 Yes 16 0.79 Yes 0 0 No -28 0.65 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 10090157 - NM_017491 WDR1 1 0.52 4.64 70 9.12 80.19 27 5.74 Yes 27 0.64 No 0 0 No -26 0.92 Yes 44 92.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 10110020 - NM_017491 WDR1 1 0.03 0.33 16 8.2 90.3 22 6.94 Yes 9 1 Yes 0 0 No -29 0.52 No 41 75.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 10117284 - NM_017491 WDR1 1 0.1 1.18 45 6.42 71.96 29 5.39 No 16 1.35 Yes 0 0 No -28 0.9 Yes 42 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 10117854 - NM_017491 WDR1 1 0.06 0.33 21 -3.25 0 36 9.85 Yes 23 1.65 Yes 0 0 No -35 0.88 Yes 35 80.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 122615574 + NM_018117 WDR11 1 0.39 0.43 26 -4.51 70.4 59 9.49 Yes 46 1.02 Yes 21 0.37 Yes -58 0.82 Yes 12 95.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 122615593 + NM_018117 WDR11 1 1.06 1.24 46 9.09 89.12 15 5.29 No 65 1.01 Yes 21 0.37 Yes -21 0.83 Yes 49 85.75 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 122618489 + NM_018117 WDR11 1 0.3 0.35 19 5.47 76.83 41 8.41 Yes 28 1.34 Yes 0 0 No -35 0.61 No 35 65.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 122622224 + NM_018117 WDR11 1 0.07 0.11 7 3.55 72.15 23 6.39 Yes 66 -6.07 No 27 0.77 Yes -22 0.63 No 48 77.91 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 122625249 + NM_018117 WDR11 1 0.15 0.15 10 -7.45 65.81 24 6.16 Yes 11 1.12 Yes 0 0 No -29 0.73 Yes 41 79.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 122626086 + NM_018117 WDR11 1 0.12 0.14 8 -2.46 0 15 3.73 No 19 0.38 No 0 0 No -31 0.76 Yes 39 81.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 122626580 + NM_018117 WDR11 1 0.92 0.67 35 3.31 74.36 22 6.67 Yes 9 0.6 No 0 0 No -21 0.55 No 49 48.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 122626633 + NM_018117 WDR11 1 5.98 4.31 70 7.07 76.83 30 5.74 Yes 29 0.88 Yes 0 0 No -29 0.97 Yes 41 97.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 122634196 + NM_018117 WDR11 1 0.13 0.15 11 8.93 74.53 31 6 Yes 51 1.01 Yes 0 0 No -29 0.67 Yes 41 72.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 122635043 + NM_018117 WDR11 1 0.14 0.18 11 7.32 87.51 34 6.73 Yes 21 0.17 No 0 0 No -26 0.43 No 34 36.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 122636440 + NM_018117 WDR11 1 0.08 0.1 7 7.11 83.51 23 5.73 Yes 10 1.04 Yes 0 0 No -22 0.56 No 48 71.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 122638827 + NM_018117 WDR11 1 0.77 0.63 32 8.06 94.51 27 4.98 No 15 0.28 No 0 0 No -27 0.77 Yes 43 62.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 122639874 + NM_018117 WDR11 1 1.12 0.89 38 4.44 70.83 29 5.7 Yes 25 0.64 No 0 0 No -26 0.37 No 42 33.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 122650203 + NM_018117 WDR11 1 0.9 1.03 44 5.26 76.34 29 5.25 No 16 0.26 No 22 0.82 Yes -25 0.36 No 42 63.2 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 122650233 + NM_018117 WDR11 1 0.22 0.25 16 -1.66 0 10 3.87 No 16 0.47 No 0 0 No -58 0.45 No 42 79.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 122664161 + NM_018117 WDR11 1 0.69 0.78 31 2.37 0 31 5.01 No 50 -2.8 No 29 0.81 Yes -33 0.75 Yes 37 74.44 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 122668069 + NM_018117 WDR11 1 0.4 0.39 18 4.91 81.04 46 4.87 No 68 1.85 Yes 0 0 No -30 0.69 Yes 25 61.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 122668069 + NM_018117 WDR11 1 0.26 0.25 13 4.91 81.04 46 4.87 No 68 1.85 Yes 0 0 No -30 0.69 Yes 25 61.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 122668073 + NM_018117 WDR11 1 0.12 0.11 8 -13.19 0 50 5.08 No 72 1.85 Yes 0 0 No -49 0.47 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 203746449 - NM_018256 WDR12 1 0.05 0.1 7 8.76 87.15 13 5.5 No 34 0.37 No 0 0 No -27 0.65 No 43 57.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 203750223 - NM_018256 WDR12 1 0.08 0.17 10 5.61 70.87 27 6.28 Yes 14 1.17 Yes 0 0 No -25 0.81 Yes 44 68.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 203757417 - NM_018256 WDR12 1 0.05 0.15 10 1.77 0 16 4.24 No 13 1.15 Yes 23 0.47 Yes -39 0.3 No 31 28.98 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 203760939 - NM_018256 WDR12 1 0.09 0.15 9 4.97 0 40 8.6 Yes 27 1.61 Yes 0 0 No -39 0.57 No 31 88.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 48457986 + NM_001166426 WDR13 1 0.63 0.51 26 -1.32 0 15 4.58 No 51 1.51 Yes 26 0.85 Yes -38 0.61 No 18 45.2 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 48460217 + NM_001166426 WDR13 1 0.26 0.21 14 7.36 78.51 14 4.68 No 1 0.14 No 0 0 No -21 0.66 No 49 42.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 48460217 + NM_001166426 WDR13 1 0.65 0.65 29 7.36 78.51 14 4.68 No 1 0.14 No 0 0 No -21 0.66 No 49 42.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 48462911 + NM_001166426 WDR13 1 0.75 0.51 30 7.34 81.01 37 7.47 Yes 7 1.42 Yes 0 0 No -22 0.88 Yes 48 90.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 986135 + NM_024100 WDR18 1 0.43 0.76 36 12.33 92 30 4.47 No 17 1.45 Yes 0 0 No -23 0.87 Yes 47 84.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 990915 + NM_024100 WDR18 1 0.29 0.26 15 5.68 73.02 19 7 Yes 6 -0.09 No 25 0.93 Yes -32 0.56 No 52 86.43 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 990977 + NM_024100 WDR18 1 0.24 0.25 14 7.84 89.55 18 4.9 No 5 0.13 No 0 0 No -44 0.42 No 53 59.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 991994 + NM_024100 WDR18 1 0.91 1.25 51 1.99 71.83 33 6.5 Yes 45 2.17 Yes 32 0.8 Yes -28 0.62 No 42 66.41 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 39209351 + NM_001317924 WDR19 1 1.94 0.14 9 4.87 76.1 26 5.39 No 28 -2.4 No 0 0 No -25 0.55 No 46 51.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 39219606 + NM_001317924 WDR19 1 1.68 0.25 14 -0.24 0 31 5.36 No 18 0.82 Yes 26 0.81 Yes -30 0.54 No 40 65.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 39219887 + NM_001317924 WDR19 1 2.32 0.21 11 8.94 88.03 30 6.81 Yes 4 0.95 Yes 0 0 No -29 0.81 Yes 41 76.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 39274793 + NM_001317924 WDR19 1 3.64 0.35 21 3.75 88.04 20 6.69 Yes 7 2.16 Yes 0 0 No -27 0.76 Yes 43 69.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 39278298 + NM_001317924 WDR19 1 1.45 0.21 15 2.11 71.7 28 7.68 Yes 15 0.44 No 0 0 No -28 0.81 Yes 43 68.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 102659799 + NM_001242415 WDR20 1 6.21 2.36 65 8.85 90.15 31 6.66 Yes 18 0.44 No 30 0.76 Yes -30 0.89 Yes 40 86.36 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 738049 - NM_032259 WDR24 1 0.35 0.14 9 6.71 85.23 29 6.56 Yes 57 0.76 No 0 0 No -28 0.4 No 50 71.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 738094 - NM_032259 WDR24 1 1.15 0.4 26 8.69 82.82 25 5.57 Yes 69 1.38 Yes 24 0.9 Yes -24 0.96 Yes 46 94.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 100863522 + NM_001161476 WDR25 1 1.77 0.22 10 7.88 85.69 24 6.75 Yes 72 1.59 Yes 0 0 No -23 0.68 Yes 47 61.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 100863522 + NM_001161476 WDR25 1 1.47 0.18 10 7.88 85.69 24 6.75 Yes 72 1.59 Yes 0 0 No -23 0.68 Yes 47 61.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 224574205 - NM_001115113 WDR26 1 0.48 0.99 45 12.09 91.54 17 7.28 Yes 4 1.1 Yes 22 0.54 Yes -22 0.52 No 18 56.24 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 224580602 - NM_001115113 WDR26 1 0.27 0.56 27 8.83 85.86 21 6.42 Yes 8 0.9 Yes 0 0 No -25 0.43 No 45 82.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 224581057 - NM_001115113 WDR26 1 0.07 0.15 9 2.57 74.43 25 5.1 No 12 1.19 Yes 0 0 No -24 0.9 Yes 46 93.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224585029 - NM_001115113 WDR26 1 0.05 0.15 11 8.34 81.3 38 6.08 Yes 25 0.23 No 0 0 No -37 0.76 Yes 33 76.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224588768 - NM_001115113 WDR26 1 0.05 0.14 8 2.29 0 29 3.97 No 51 0.89 Yes 0 0 No -24 0.68 Yes 46 74.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224589812 - NM_001115113 WDR26 1 0.95 2.76 66 7.5 89.17 58 9.02 Yes 45 1.6 Yes 39 0.62 Yes -39 0.63 No 31 83.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 224599265 - NM_001115113 WDR26 1 3.86 9.56 72 -9.67 84.31 27 6.2 Yes 32 1.48 Yes 0 0 No -26 0.69 Yes 44 79.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224601038 - NM_001115113 WDR26 1 0.65 1.57 52 6.99 88.84 31 6.34 Yes 18 0.72 No 26 0.58 Yes -30 0.69 Yes 40 67.97 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 224605978 - NM_001115113 WDR26 1 0.2 0.5 28 9.19 81.52 28 4.39 No 15 0.59 No 0 0 No -27 0.75 Yes 43 80.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224606075 - NM_001115113 WDR26 1 0.52 1.28 49 6.28 75.64 25 5.91 Yes 12 1.34 Yes 0 0 No -24 0.75 Yes 46 79.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224606101 - NM_001115113 WDR26 1 1.41 3.42 68 1.65 78.91 22 5.19 No 9 0.42 No 0 0 No -56 0.47 No 17 28.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 224609747 - NM_001115113 WDR26 1 0.71 1.32 49 9.98 86.44 34 7.73 Yes 21 1.31 Yes 0 0 No -28 0.69 Yes 42 72.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224611283 - NM_001115113 WDR26 1 0.09 0.18 11 7.46 85.67 20 7.14 Yes 7 1.27 Yes 0 0 No -19 0.71 Yes 51 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 224612422 - NM_001115113 WDR26 1 0.57 0.82 39 7.5 81.69 15 5.74 Yes 73 0.74 No 24 0.36 Yes -24 0.57 No 47 51.54 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 224614805 - NM_001115113 WDR26 1 0.14 0.19 12 3.2 0 30 8.37 Yes 17 0.95 Yes 0 0 No -28 0.45 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 224619480 - NM_001115113 WDR26 1 0.26 0.46 27 0.73 0 25 5.66 Yes 32 0.42 No 0 0 No -24 0.72 Yes 46 86.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 224620968 - NM_001115113 WDR26 1 0.13 0.22 14 2.09 81.26 25 4.87 No 13 0.03 No 0 0 No -24 0.45 No 46 61.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 170055508 - NM_182552 WDR27 1 3.78 0.11 7 3.6 87.28 23 5.2 No 21 -2.84 No 0 0 No -22 0.95 Yes 48 95.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 170057704 - NM_182552 WDR27 1 31.14 1.64 56 9 92.09 22 5.66 Yes 9 1.25 Yes 0 0 No -25 0.92 Yes 45 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170058098 - NM_182552 WDR27 1 1.39 0.11 7 7.79 76.62 29 6.4 Yes 16 2.32 Yes 0 0 No -28 0.92 Yes 42 94.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 170070746 - NM_182552 WDR27 1 0.9 0.13 9 2.99 71.63 22 6.16 Yes 39 0.76 No 0 0 No -21 0.63 No 49 70.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 170071054 - NM_182552 WDR27 1 6.74 0.94 38 6.35 89.63 25 6.03 Yes -3 0.63 No 0 0 No -24 0.8 Yes 46 74.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 118476252 + NM_006784 WDR3 1 0.17 0.17 11 9.52 90.77 25 5.29 No 49 1.17 Yes 24 0.92 Yes -24 0.84 Yes 46 81.63 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 118493458 + NM_006784 WDR3 1 0.11 0.18 9 -21.92 0 25 6.23 Yes -2 0.92 Yes 0 0 No -24 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 118502116 + NM_006784 WDR3 1 5.06 6.79 70 10.29 88.85 42 7.39 Yes 46 0.96 Yes 0 0 No -41 0.71 Yes 29 67.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 128471424 - NM_018383 WDR33 1 0.14 0.14 8 1.85 72.86 26 5.29 No 28 0.84 Yes 0 0 No -25 0.96 Yes 45 95.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128473482 - NM_018383 WDR33 1 0.42 0.35 17 11.85 94.11 70 9.33 Yes 57 2.48 Yes 0 0 No -43 0.38 No 27 79.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128495629 - NM_018383 WDR33 1 0.18 0.19 11 8.36 83.58 24 5.31 No 11 0.66 No 23 0.79 Yes -23 0.75 Yes 47 79.07 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 128498117 - NM_018383 WDR33 1 0.26 0.28 18 9.46 87.19 24 5 No 11 1.08 Yes 0 0 No -23 0.72 Yes 47 70 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128501829 - NM_018383 WDR33 1 0.55 0.63 31 7.16 76.8 42 6.84 Yes 29 1.6 Yes 0 0 No -18 0.74 Yes 52 85.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128506456 - NM_018383 WDR33 1 0.13 0.13 7 9.99 82.63 36 4.28 No 18 0.81 Yes 0 0 No -30 0.56 No 40 74.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128506523 - NM_018383 WDR33 1 0.18 0.19 10 9.11 90.84 29 6.65 Yes 63 -1.99 No 0 0 No -33 0.46 No 37 33.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 128509124 - NM_018383 WDR33 1 0.1 0.11 8 8.25 93.89 28 6.57 Yes 15 0.7 No 0 0 No -27 0.85 Yes 43 90.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128513080 - NM_018383 WDR33 1 1.56 1.49 54 7.82 90.64 19 5.5 No 54 0.94 Yes 0 0 No -23 0.65 No 47 72.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128522834 - NM_018383 WDR33 1 0.11 0.29 16 -0.16 0 13 4.36 No 21 1.55 Yes 0 0 No -34 0.64 No 37 81.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128524239 - NM_018383 WDR33 1 0.43 1.13 48 3.58 74.06 19 5.25 No 56 1.2 Yes 0 0 No -23 0.53 No 47 70.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128528509 - NM_018383 WDR33 1 0.32 0.78 39 4.38 73.64 42 6.78 Yes 65 -2.02 No 0 0 No -39 0.78 Yes 31 94.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128528571 - NM_018383 WDR33 1 0.14 0.31 17 -0.4 0 16 4.12 No 31 1.3 Yes 0 0 No -31 0.63 No 39 76.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 128546926 - NM_018383 WDR33 1 0.12 0.31 15 2.02 80.01 22 6.31 Yes 9 0.74 No 0 0 No -21 0.88 Yes 49 87.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128547037 - NM_018383 WDR33 1 0.07 0.14 8 1.55 71.28 27 5.12 No 72 0.6 No 0 0 No -26 0.95 Yes 44 87.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 128547164 - NM_018383 WDR33 1 0.05 0.14 7 3.69 84.22 35 8.27 Yes 3 1.45 Yes 0 0 No -34 0.8 Yes 36 88.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128559062 - NM_018383 WDR33 1 0.74 1.78 55 9.58 87.01 59 8.25 Yes 46 1.24 Yes 0 0 No -58 0.85 Yes 12 79.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128562461 - NM_018383 WDR33 1 0.18 0.42 23 9.61 90.7 30 5.12 No 38 0.96 Yes 0 0 No -29 0.73 Yes 41 75.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 128567338 - NM_018383 WDR33 1 0.05 0.1 7 8.93 82.8 24 6.32 Yes 11 1.13 Yes 0 0 No -23 0.83 Yes 47 86.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131396605 - NM_052844 WDR34 1 0.9 1.32 44 6.73 84.04 33 7.21 Yes 20 1.64 Yes 0 0 No -32 0.9 Yes 38 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131397401 - NM_052844 WDR34 1 0.19 0.18 11 4.14 78.42 28 5.48 No 15 0.58 No 0 0 No -27 0.95 Yes 43 96.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131397455 - NM_052844 WDR34 1 5.38 5.15 70 0.78 86.51 24 4.9 No 74 -1.56 No 0 0 No -23 0.77 Yes 47 32.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 131397455 - NM_052844 WDR34 1 0.19 0.15 8 0.78 86.51 24 4.9 No 74 -1.56 No 0 0 No -23 0.77 Yes 47 32.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 131397521 - NM_052844 WDR34 1 0.22 0.14 9 -5.66 64.01 25 5.18 No 61 0.73 No 0 0 No -24 0.84 Yes 46 71.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131397521 - NM_052844 WDR34 1 0.18 0.17 9 -5.66 64.01 25 5.18 No 61 0.73 No 0 0 No -24 0.84 Yes 46 71.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 131398044 - NM_052844 WDR34 1 0.1 0.13 8 -17.62 72.69 17 4.63 No 21 1.11 Yes 0 0 No -25 0.83 Yes 48 25.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 20141487 - NM_001006657 WDR35 1 3.51 0.58 33 4.13 77.4 24 4.79 No 50 0.43 No 0 0 No -23 0.8 Yes 47 67.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 20152052 - NM_001006657 WDR35 1 0.75 0.11 8 9.91 93.89 29 5.35 No 16 1.01 Yes 0 0 No -28 0.9 Yes 42 94.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 20177882 - NM_001006657 WDR35 1 2.35 0.29 19 3.44 0 22 4.41 No 46 0.02 No 0 0 No -17 0.73 Yes 53 66.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 20177929 - NM_001006657 WDR35 1 1.51 0.17 10 4.17 68.95 96 8.6 Yes 73 0.62 No 0 0 No -57 0.23 No 46 39.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 20188638 - NM_001006657 WDR35 1 2.31 0.5 23 4.79 76.52 22 4.88 No 33 0.23 No 0 0 No -21 0.87 Yes 49 78.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 110432763 + NM_139281 WDR36 1 0.16 0.14 8 0.87 0 33 6.9 Yes 20 0.51 No 38 0.57 Yes -32 0.47 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 110436290 + NM_139281 WDR36 1 0.08 0.14 9 -0.79 72.58 20 8.11 Yes 7 0.92 Yes 0 0 No -22 0.72 Yes 37 41.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 110438066 + NM_139281 WDR36 1 0.61 1.03 39 8.23 85.21 22 5.66 Yes 69 0.99 Yes 0 0 No -21 0.44 No 45 46.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 110440397 + NM_139281 WDR36 1 0.13 0.25 15 -12.63 0 23 6 Yes 10 1.97 Yes 0 0 No -22 0.82 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 110442994 + NM_139281 WDR36 1 0.07 0.11 8 -2 78.92 33 5.96 Yes 8 0.17 No 0 0 No -32 0.52 No 38 56.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 110454718 + NM_139281 WDR36 1 0.14 0.32 17 1.74 0 15 4.12 No 9 0.57 No 0 0 No -29 0.65 No 40 56.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 110456699 + NM_139281 WDR36 1 2.29 4.38 71 -2.29 0 9 3.52 No 9 0.16 No 0 0 No -26 0.45 No 44 69.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 1124356 + NM_014023 WDR37 1 0.67 0.19 11 2.44 80.44 26 6.41 Yes 13 0.66 No 0 0 No -26 0.69 Yes 44 71.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 1124387 + NM_014023 WDR37 1 0.56 0.17 9 4.09 68.38 30 6.32 Yes 44 0.63 No 0 0 No -29 0.55 No 41 58.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 1125495 + NM_014023 WDR37 1 2.6 0.82 39 4.8 84.41 31 8.06 Yes 18 1.98 Yes 0 0 No -30 0.86 Yes 40 94.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 1169922 + NM_014023 WDR37 1 0.65 0.14 8 9.26 79.41 27 8.42 Yes 14 1.96 Yes 0 0 No -27 0.65 No 43 77.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr21 44273838 - NR_048535 WDR4 1 0.23 0.19 13 7.42 86.01 28 5.81 Yes 39 0.8 Yes 0 0 No -51 0.35 No 46 38.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr21 44274734 - NR_048535 WDR4 1 4.85 3.51 64 2.82 74.88 25 5.89 Yes 12 0.77 Yes 0 0 No -24 0.89 Yes 46 90.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 44275235 - NR_048535 WDR4 1 0.23 0.17 8 3.97 84.41 27 5.3 No 15 -0.97 No 0 0 No -31 0.59 No 39 71.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 76733246 - NM_018268 WDR41 1 0.22 0.25 16 2.19 0 22 7.33 Yes 68 1.32 Yes 0 0 No -28 0.36 No 42 58.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 76739666 - NM_018268 WDR41 1 0.14 0.18 10 9.19 92 31 5.32 No 9 0.64 No 0 0 No -21 0.37 No 44 41.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 76744135 - NM_018268 WDR41 1 0.12 0.17 12 6.69 83.64 29 7.56 Yes 16 0.46 No 0 0 No -28 0.58 No 42 68.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 76745678 - NM_018268 WDR41 1 0.09 0.13 7 -5.65 0 17 4.12 No 35 0.52 No 0 0 No -45 0.34 No 23 55.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 76745686 - NM_018268 WDR41 1 0.27 0.4 21 4.57 0 17 4.27 No 27 0.54 No 29 0.72 Yes -37 0.32 No 33 51.56 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 76747172 - NM_018268 WDR41 1 0.34 0.42 22 -4.41 0 17 3.92 No 75 0.87 Yes 25 0.55 Yes -32 0.44 No 33 45.42 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 76747188 - NM_018268 WDR41 1 0.89 0.99 39 -4.58 0 22 6.02 Yes 59 0.87 Yes 25 0.55 Yes -21 0.51 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 76776015 - NM_018268 WDR41 1 0.31 0.35 21 11.1 86.5 24 5.29 No 11 0.41 No 23 0.73 Yes -23 0.58 No 47 66.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr5 76781367 - NM_018268 WDR41 1 0.35 0.51 27 11.44 92.18 21 5.05 No 8 1.2 Yes 0 0 No -25 0.94 Yes 45 96.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 76785383 - NM_018268 WDR41 1 2.36 2.56 60 5.33 87.74 24 4.75 No 66 1.22 Yes 25 0.03 Yes -23 0.72 Yes 48 18.87 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 29125344 + NM_015131 WDR43 1 0.04 0.17 8 1.17 0 18 4.23 No 5 1.48 Yes 0 0 No -17 0.86 Yes 53 92.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 29140762 + NM_015131 WDR43 1 0.1 0.31 19 3.71 0 27 7.64 Yes 14 1.07 Yes 0 0 No -26 0.81 Yes 44 68.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 29152923 + NM_015131 WDR43 1 1.11 4.25 65 10.28 91.61 24 5.53 No 24 0.02 No 23 0.77 Yes -26 0.45 No 47 59.02 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 29158387 + NM_015131 WDR43 1 0.03 0.11 7 -12.8 0 22 5.26 No 43 1.14 Yes 0 0 No -30 0.84 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 29158390 + NM_015131 WDR43 1 0.07 0.25 15 -2.22 0 25 5.43 No 46 1.15 Yes 0 0 No -33 0.84 Yes 37 91.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 29165159 + NM_015131 WDR43 1 0.38 1.58 53 -0.78 0 37 8.12 Yes 7 0.26 No 25 0.91 Yes -36 0.63 No 34 82.16 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 29169452 + NM_015131 WDR43 1 0.06 0.25 15 0.38 0 28 3.22 No 68 0.55 No 32 0.76 Yes -19 0.91 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chrX 117531587 + NM_001184966 WDR44 1 0.34 0.17 11 7.79 88.05 32 4.88 No 41 1.02 Yes 0 0 No -22 0.35 No 36 31.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 117577546 + NM_001184966 WDR44 1 1.59 0.53 22 3.19 71.27 27 4.29 No 7 0.56 No 26 0.89 Yes -26 0.91 Yes 44 86.21 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chrX 48933113 - NM_007075 WDR45 1 0.56 0.38 23 0.91 0 15 4.58 No 13 1.62 Yes 0 0 No -32 0.63 No 45 60.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 48933323 - NM_007075 WDR45 1 5.02 3.64 65 6.03 75.72 27 5.39 No 14 0.78 Yes 26 0.92 Yes -26 0.87 Yes 44 88.48 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 48933638 - NM_007075 WDR45 1 0.53 0.35 20 4.19 84.38 21 5.19 No 28 0.83 Yes 20 0.82 Yes -20 0.73 Yes 50 61.86 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chrX 48933935 - NM_007075 WDR45 1 0.57 0.33 17 7.15 85.15 22 5.1 No 15 1.21 Yes 21 0.95 Yes -21 0.81 Yes 49 84.55 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 80576971 - NM_019613 WDR45B 1 6.23 4.43 72 4.21 82.67 26 5.15 No 36 0.49 No 25 0.91 Yes -25 0.9 Yes 45 91.89 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 80579651 - NM_019613 WDR45B 1 0.12 0.14 10 8.84 78.42 32 5.83 Yes 38 0.39 No 0 0 No -31 0.65 No 39 80.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 80583639 - NM_019613 WDR45B 1 0.23 0.13 8 6.25 67.25 42 5.38 No 64 0.22 No 0 0 No -44 0.63 No 26 66.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 80584885 - NM_019613 WDR45B 1 1.61 0.81 38 8.99 93.72 19 5.39 No 33 -2.38 No 22 0.66 Yes -22 0.79 Yes 48 77.25 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 80587505 - NM_019613 WDR45B 1 0.37 0.26 13 6.73 75.39 28 7.13 Yes 15 1.43 Yes 27 0.89 Yes -27 0.73 Yes 43 78.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 80592361 - NM_019613 WDR45B 1 0.86 0.56 25 2.84 0 31 7.85 Yes 18 1.86 Yes 0 0 No -30 0.83 Yes 40 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 109514087 - NM_001142551 WDR47 1 1.65 0.32 21 12.02 86.39 31 6.05 Yes 70 -3.13 No 0 0 No -27 0.55 No 43 58.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 109525396 - NM_001142551 WDR47 1 0.45 0.17 11 -0.62 0 9 3.87 No 13 0.65 No 0 0 No -45 0.7 Yes 28 53.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 109525408 - NM_001142551 WDR47 1 1.25 0.42 25 -1.99 0 34 6.08 Yes 1 0.69 No 39 0.38 Yes -33 0.72 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 109547341 - NM_001142551 WDR47 1 20.97 7.61 72 0.18 70.63 64 9.46 Yes 51 1.82 Yes 43 0.5 Yes -59 0.51 No 27 61.94 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 39107305 + NM_001346228 WDR48 1 0.43 0.43 23 -1.16 0 34 5.65 Yes 62 0.85 Yes 0 0 No -26 0.63 No 44 67.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 39108065 + NM_001346228 WDR48 1 0.3 0.35 17 1.43 75.14 26 6 Yes 33 1.08 Yes 25 0.81 Yes -26 0.37 No 41 38.88 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 39108447 + NM_001346228 WDR48 1 0.11 0.13 7 5.42 75.41 30 5.22 No 3 0.1 No 0 0 No -29 0.28 No 41 29.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 39127791 + NM_001346228 WDR48 1 1.1 0.92 36 7.62 79.59 24 5.1 No -4 0.9 Yes 23 0.85 Yes -23 0.79 Yes 39 69.56 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 39133109 + NM_001346228 WDR48 1 0.11 0.11 8 -0.19 0 34 6.16 Yes 44 1.11 Yes 25 0.61 Yes -33 0.79 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr9 137007125 + NM_052821 WDR5 1 0.12 0.21 12 10.06 89.03 22 6 Yes 64 2.37 Yes 0 0 No -21 0.8 Yes 49 91.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 137007125 + NM_052821 WDR5 1 0.59 0.9 41 10.06 89.03 22 6 Yes 64 2.37 Yes 0 0 No -21 0.8 Yes 49 91.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 137021952 + NM_052821 WDR5 1 0.27 0.71 30 8.44 89.23 27 7.28 Yes 14 0.79 Yes 0 0 No -26 0.81 Yes 44 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 137023047 + NM_052821 WDR5 1 0.05 0.15 10 5.02 82.12 21 4.81 No 40 2.03 Yes 0 0 No -20 0.71 Yes 50 82.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74650609 + NM_001320824 WDR54 1 0.21 0.15 10 2.02 0 30 7.04 Yes 17 1.51 Yes 0 0 No -29 0.87 Yes 41 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 74652223 + NM_001320824 WDR54 1 1.91 1.75 55 9.74 80.12 19 3.77 No 20 0.27 No 24 0.73 Yes -24 0.68 Yes 46 66.24 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 74652223 + NM_001320824 WDR54 1 0.24 0.18 11 9.74 80.12 19 3.77 No 20 0.27 No 24 0.73 Yes -24 0.68 Yes 46 66.24 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 74652766 + NM_001320824 WDR54 1 2.02 1.82 61 7.06 88.66 40 5.86 Yes 39 0.56 No 33 0.12 Yes -33 0.72 Yes 37 62.13 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 140046628 + NM_017706 WDR55 1 0.21 0.17 9 4.48 81.52 26 6.39 Yes 13 1.45 Yes 0 0 No -25 0.89 Yes 45 84.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 74920826 - NM_030581 WDR59 1 0.24 0.15 10 8.01 84.45 29 6.41 Yes 42 1.01 Yes 0 0 No -28 0.57 No 39 67.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 74933653 - NM_030581 WDR59 1 0.35 0.15 10 8.67 85.25 54 9.56 Yes 4 1.48 Yes 33 0.1 Yes -53 0.78 Yes 17 85.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 74938072 - NM_030581 WDR59 1 0.4 0.26 14 3.55 74.51 28 7 Yes 44 1.36 Yes 22 0.55 Yes -27 0.95 Yes 43 92.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 74954665 - NM_030581 WDR59 1 0.33 0.21 12 8.63 93.15 27 7.85 Yes 58 0.45 No 0 0 No -26 0.53 No 47 54.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 74956853 - NM_030581 WDR59 1 0.37 0.24 14 1.57 65.35 30 6.33 Yes 46 0.65 No 0 0 No -29 0.55 No 41 74.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 74964764 - NM_030581 WDR59 1 0.43 0.35 19 6.44 92 27 5.2 No 64 2.05 Yes 0 0 No -26 0.57 No 44 26.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 74972182 - NM_030581 WDR59 1 1.14 0.93 39 2.85 65.21 31 5.74 Yes 55 1.42 Yes 24 0.44 Yes -30 0.93 Yes 40 87.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 74973856 - NM_030581 WDR59 1 0.52 0.44 25 8.49 89.75 25 5.2 No 12 0.06 No 0 0 No -24 0.85 Yes 46 66.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 74981498 - NM_030581 WDR59 1 0.54 0.46 22 11.11 81.71 24 5.28 No 64 -3.83 No 0 0 No -24 0.7 Yes 46 66.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 74983846 - NM_030581 WDR59 1 0.38 0.26 16 6.15 81.83 35 6.24 Yes 22 1.28 Yes 34 0.39 Yes -34 0.77 Yes 36 93.83 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 74993351 - NM_030581 WDR59 1 0.29 0.17 11 6.29 74.55 29 5.55 No 36 0.56 No 0 0 No -28 0.59 No 39 45.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 74993491 - NM_030581 WDR59 1 1.6 0.97 41 9.94 94.25 42 7.15 Yes 29 1.28 Yes 26 0.59 Yes -41 0.4 No 29 42.39 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 74994643 - NM_030581 WDR59 1 0.32 0.18 11 3.93 83.86 70 8.89 Yes 57 1.99 Yes 0 0 No -52 0.42 No 18 61.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 74994650 - NM_030581 WDR59 1 0.33 0.17 10 2.53 0 63 8.58 Yes 50 1.98 Yes 0 0 No -37 0.35 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 74997146 - NM_030581 WDR59 1 1.8 1.13 37 5.85 84.59 50 7.01 Yes 74 0.92 Yes 26 0.7 Yes -26 0.76 Yes 44 77.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 75016448 - NM_030581 WDR59 1 0.55 0.32 15 5.97 90.66 27 6.4 Yes 14 0.99 Yes 0 0 No -26 0.86 Yes 44 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 49051623 + NM_001320547 WDR6 1 0.08 0.15 9 3.92 76.32 10 4.8 No 59 -4.12 No 23 0.96 Yes -38 0.46 No 54 50.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 49051831 + NM_001320547 WDR6 1 0.47 0.89 39 10.94 98.74 19 5 No 29 0.9 Yes 0 0 No -24 0.46 No 29 60.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 49052010 + NM_001320547 WDR6 1 0.82 1.78 58 5.87 83.85 25 5.43 No 12 0.84 Yes 27 0.95 Yes -24 0.85 Yes 46 64.28 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 158673946 + NM_018051 WDR60 1 1.02 0.14 9 8.53 83.47 26 4.36 No 46 1.6 Yes 0 0 No -25 0.85 Yes 45 89.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 158684735 + NM_018051 WDR60 1 4.72 0.19 11 9.02 94.51 26 6.79 Yes 13 0.98 Yes 0 0 No -25 0.9 Yes 45 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 158692832 + NM_018051 WDR60 1 1.43 0.11 7 3.55 83.86 36 6.2 Yes 17 1.28 Yes 0 0 No -29 0.78 Yes 41 78.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 158692836 + NM_018051 WDR60 1 7.5 0.4 20 2.88 0 40 6.45 Yes 21 1.26 Yes 0 0 No -33 0.75 Yes 37 78.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 158697856 + NM_018051 WDR60 1 4.15 0.32 17 3.01 0 33 5.82 Yes 71 1.11 Yes 0 0 No -52 0.7 Yes 32 70.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 158704317 + NM_018051 WDR60 1 2.49 0.4 18 5.07 70.72 46 6.85 Yes 33 1.36 Yes 0 0 No -32 0.6 No 29 75.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 78578067 - NM_001303248 WDR61 1 0.3 0.49 26 6.16 76.01 26 4.19 No 57 0.39 No 25 0.78 Yes -35 0.59 No 35 58.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 78578962 - NM_001303248 WDR61 1 0.13 0.25 15 9.89 82.55 27 5.47 No 14 0.31 No 0 0 No -27 0.61 No 44 66.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 78581260 - NM_001303248 WDR61 1 0.21 0.71 35 5.96 76.15 143 11.19 Yes 54 0.78 Yes 32 0.74 Yes -32 0.52 No 38 79.02 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 78582053 - NM_001303248 WDR61 1 0.12 0.35 19 -12.38 68.49 28 6.15 Yes 15 1.29 Yes 0 0 No -27 0.71 Yes 43 82.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 78588136 - NM_001303248 WDR61 1 2.93 3.46 70 3.98 86.35 31 4.48 No 3 0.01 No 27 0.34 Yes -30 0.48 No 40 71.26 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 36557109 + NM_001083961 WDR62 1 2.74 0.65 30 1.92 66.52 13 7.99 Yes 0 0.78 Yes 0 0 No -31 0.6 No 39 64.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36558075 + NM_001083961 WDR62 1 0.71 0.24 15 4.92 86.38 21 4.8 No 28 -1.37 No 0 0 No -20 0.68 Yes 50 83.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36564258 + NM_001083961 WDR62 1 0.43 0.13 8 8.84 91.49 18 4.9 No 22 0.37 No 0 0 No -17 0.28 No 29 50.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36564258 + NM_001083961 WDR62 1 4.04 1.46 46 8.84 91.49 18 4.9 No 22 0.37 No 0 0 No -17 0.28 No 29 50.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36564316 + NM_001083961 WDR62 1 0.94 0.28 17 4.82 72.18 22 6.16 Yes 9 2.35 Yes 0 0 No -21 0.89 Yes 49 84.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36564550 + NM_001083961 WDR62 1 3.69 0.64 31 3.88 82.82 24 4.4 No 7 1.66 Yes 23 0.93 Yes -23 0.97 Yes 47 96.34 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 36565956 + NM_001083961 WDR62 1 1.22 0.35 22 11.36 95.65 41 6.44 Yes 33 1.28 Yes 29 0.7 Yes -28 0.57 No 41 74.09 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 36572695 + NM_001083961 WDR62 1 3.41 1.15 41 8.25 83.27 37 6.09 Yes 0 1.43 Yes 22 0.71 Yes -36 0.5 No 48 57.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 36580126 + NM_001083961 WDR62 1 2.85 0.94 38 4.29 65.87 27 6.95 Yes 50 -1.26 No 0 0 No -24 0.69 Yes 46 82.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36591653 + NM_001083961 WDR62 1 1.46 0.31 22 -0.83 0 32 6.16 Yes 19 -0.3 No 0 0 No -31 0.77 Yes 39 81.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36592924 + NM_001083961 WDR62 1 0.52 0.14 9 -0.99 0 12 4.24 No 39 1.37 Yes 0 0 No -51 0.9 Yes 19 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36593653 + NM_001083961 WDR62 1 46.35 8.96 71 5.58 83.71 18 4.69 No 32 -1.36 No 29 0.82 Yes -22 0.68 Yes 55 43.69 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr18 54340517 + NM_052834 WDR7 1 0.58 0.19 10 7.11 85.74 71 5.75 Yes 15 1.6 Yes 0 0 No -27 0.74 Yes 43 78.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 54353396 + NM_052834 WDR7 1 0.57 0.29 16 7.48 90.01 27 5.91 Yes 58 0.8 Yes 0 0 No -26 0.77 Yes 44 82.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 54367021 + NM_052834 WDR7 1 0.88 0.56 29 8.94 76.63 26 4.74 No 13 0.77 No 0 0 No -34 0.47 No 36 58.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 54367025 + NM_052834 WDR7 1 0.32 0.21 12 -0.54 0 30 4.97 No -2 0.77 No 0 0 No -38 0.43 No 32 58.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 54445670 + NM_052834 WDR7 1 1.15 0.44 24 7.88 76.03 59 7.72 Yes 51 0.67 No 0 0 No -28 0.79 Yes 42 81.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 54504935 + NM_052834 WDR7 1 0.22 0.1 7 5.61 93.17 28 5.29 No 35 0.92 Yes 0 0 No -27 0.66 Yes 18 60.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr18 54585302 + NM_052834 WDR7 1 0.25 0.15 10 7.92 78.65 34 5.88 Yes 1 0.4 No 0 0 No -33 0.69 Yes 37 62.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 54614544 + NM_052834 WDR7 1 0.34 0.15 10 7.23 87.22 38 4.41 No 74 0.75 No 0 0 No -31 0.44 No 39 32.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 54677068 + NM_052834 WDR7 1 2.93 1.21 52 5.09 91.92 21 4.84 No 66 0.23 No 23 0.72 Yes -23 0.86 Yes 47 90.97 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 37392104 + NM_001345999 WDR70 1 6.32 4.85 71 1.21 70.88 25 6.72 Yes 33 1.63 Yes 0 0 No -24 0.82 Yes 46 72.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37393643 + NM_001345999 WDR70 1 0.09 0.13 8 12.42 88.72 27 5.74 Yes 64 0.68 No 0 0 No -26 0.92 Yes 44 92.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 37396562 + NM_001345999 WDR70 1 0.63 0.81 37 5.16 66.51 32 4.16 No 39 0.83 Yes 0 0 No -31 0.82 Yes 39 82.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37443368 + NM_001345999 WDR70 1 0.49 0.51 23 7.25 85.09 36 6.04 Yes 66 0.91 Yes 0 0 No -35 0.57 No 35 62.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 37473465 + NM_001345999 WDR70 1 0.77 0.74 38 4.78 84.41 27 6.86 Yes 14 0.84 Yes 0 0 No -26 0.93 Yes 44 96.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37487749 + NM_001345999 WDR70 1 0.77 0.54 30 -1.01 84.41 100 10.83 Yes 57 -3.65 No 0 0 No -27 0.26 No 45 32.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 37519311 + NM_001345999 WDR70 1 0.09 0.1 7 -1.83 74.7 105 9.73 Yes 6 1.05 Yes 0 0 No -21 0.41 No 49 61.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 37533088 + NM_001345999 WDR70 1 0.25 0.24 15 11.05 81.8 27 8 Yes 14 1.38 Yes 0 0 No -26 0.77 Yes 44 90.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37533998 + NM_001345999 WDR70 1 0.2 0.17 10 0.7 0 18 4.9 No 15 1.17 Yes 0 0 No -21 0.72 Yes 43 55.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 37560476 + NM_001345999 WDR70 1 0.24 0.19 11 8.39 80.9 34 7.28 Yes 21 1.5 Yes 0 0 No -33 0.82 Yes 37 88.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 37620409 + NM_001345999 WDR70 1 0.13 0.14 10 6.14 83.93 50 7 Yes 37 1.61 Yes 0 0 No -49 0.46 No 21 81.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 37688011 + NM_001345999 WDR70 1 0.12 0.13 7 10.32 93.42 27 6.24 Yes 14 0.48 No 26 0.85 Yes -26 0.94 Yes 44 96.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 37740972 + NM_001345999 WDR70 1 0.26 0.26 17 2.6 0 36 6.3 Yes 41 0.42 No 0 0 No -35 0.87 Yes 35 87.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 85188654 - NR_130944 WDR73 1 0.23 0.13 8 10.34 97.1 16 6.54 Yes 3 1.38 Yes 0 0 No -20 0.51 No 50 64.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 85188993 - NR_130944 WDR73 1 4 1.22 25 9.16 86.38 36 6 Yes 58 -2.71 No 0 0 No -29 0.6 No 43 69.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 85189317 - NR_130944 WDR73 1 14.31 4.58 71 7.36 84.85 21 4.86 No 8 0.69 No 20 0.76 Yes -20 0.69 Yes 50 71.47 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 62600751 - NM_018093 WDR74 1 0.13 0.19 12 -1.58 82.72 56 10 Yes 43 2.62 Yes 0 0 No -55 0.59 No 18 82.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 62601107 - NM_018093 WDR74 1 0.67 0.58 32 6.62 88.93 20 5.53 No 39 1.24 Yes 0 0 No -24 0.79 Yes 46 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62601107 - NM_018093 WDR74 1 0.14 0.18 11 6.62 88.93 20 5.53 No 39 1.24 Yes 0 0 No -24 0.79 Yes 46 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 62602011 - NM_018093 WDR74 1 0.45 0.72 34 4.06 80.12 24 5.48 No -3 0.4 No 20 0.69 Yes -23 0.51 No 50 61.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 62602728 - NM_018093 WDR74 1 0.31 0.42 23 10.37 80.15 23 5.6 Yes 10 1.58 Yes 30 0.81 Yes -30 0.51 No 40 61.46 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 190306818 + NM_001303096 WDR75 1 0.11 0.22 16 8.1 86.41 22 5.29 No 9 1.37 Yes 0 0 No -21 0.81 Yes 49 91.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190306823 + NM_001303096 WDR75 1 0.09 0.19 11 3.34 0 27 5.74 Yes 14 1.35 Yes 0 0 No -26 0.83 Yes 44 93.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190320031 + NM_001303096 WDR75 1 0.23 0.61 29 1.71 73.36 13 4.78 No 30 0.73 No 20 0.8 Yes -21 0.35 No 28 82.87 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 190320047 + NM_001303096 WDR75 1 0.09 0.25 13 -15.08 0 23 5 No 46 0.73 No 0 0 No -22 0.91 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190322093 + NM_001303096 WDR75 1 0.38 0.58 26 4.44 76.82 27 6.85 Yes 73 0.64 No 0 0 No -26 0.83 Yes 44 81.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190329808 + NM_001303096 WDR75 1 0.42 0.83 39 0.3 0 43 8.89 Yes 50 1.28 Yes 0 0 No -42 0.75 Yes 28 77.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190331221 + NM_001303096 WDR75 1 0.06 0.1 7 8.23 86.07 26 5.48 No 13 0.1 No 0 0 No -23 0.6 No 47 73.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190334557 + NM_001303096 WDR75 1 0.27 0.71 32 9.28 87.88 26 6.52 Yes 13 0.86 Yes 0 0 No -25 0.41 No 36 51.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190334820 + NM_001303096 WDR75 1 0.04 0.11 8 5.22 66.1 22 5.29 No 53 1.28 Yes 0 0 No -45 0.7 Yes 25 74.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190334848 + NM_001303096 WDR75 1 0.58 1.57 48 2.02 74.2 27 5.28 No 24 -3.11 No 0 0 No -26 0.58 No 44 66.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190339908 + NM_001303096 WDR75 1 0.41 0.57 28 -0.06 57.22 23 4.68 No 71 0.81 Yes 25 0.79 Yes -22 0.7 Yes 48 65.35 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 44120272 + NM_024908 WDR76 1 4.36 2.94 56 6.65 83.32 29 5.92 Yes 64 0.85 Yes 28 0.88 Yes -28 0.74 Yes 42 77.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 44120374 + NM_024908 WDR76 1 0.49 0.31 16 -3.42 0 20 4.26 No 68 -5.02 No 0 0 No -19 0.77 Yes 51 39.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 44124131 + NM_024908 WDR76 1 0.32 0.44 23 7.73 86.29 21 5.15 No 56 1.6 Yes 0 0 No -26 0.94 Yes 44 94.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44126691 + NM_024908 WDR76 1 0.08 0.11 7 9.08 85.02 28 7.68 Yes 15 1.55 Yes 0 0 No -27 0.92 Yes 43 95.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44138939 + NM_024908 WDR76 1 0.67 0.83 38 5.51 78.48 52 7.44 Yes 25 0.11 No 0 0 No -28 0.6 No 48 54.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 44141920 + NM_024908 WDR76 1 0.13 0.14 7 2.24 80.12 20 7.14 Yes 7 1.16 Yes 0 0 No -19 0.79 Yes 51 82.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 44149704 + NM_024908 WDR76 1 0.34 0.32 20 9.77 87.19 13 5.6 Yes 0 1.35 Yes 0 0 No -31 0.74 Yes 39 58.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 44150628 + NM_024908 WDR76 1 0.46 0.43 23 4.34 82.52 16 6.48 Yes 3 1.13 Yes 0 0 No -27 0.46 No 46 52.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 44154498 + NM_024908 WDR76 1 0.1 0.14 8 13.88 100 34 5.83 Yes 40 1.14 Yes 0 0 No -30 0.71 Yes 40 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111984006 - NM_001317064 WDR77 1 0.12 0.44 24 0.8 0 9 3.87 No NA NA NA 0 0 No -31 0.48 No 44 69.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 111984227 - NM_001317064 WDR77 1 2.96 10.63 72 7.05 88.53 71 7.72 Yes 10 1.25 Yes 22 0.92 Yes -22 0.84 Yes 48 87.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 111984692 - NM_001317064 WDR77 1 0.08 0.24 14 7.58 80.34 29 5.74 Yes 16 1.13 Yes 0 0 No -28 0.93 Yes 42 88.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 111984752 - NM_001317064 WDR77 1 1.59 5.43 71 3.99 81.08 22 5.02 No 36 -2.35 No 22 0.77 Yes -21 0.64 No 48 67.55 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 111986348 - NM_001317064 WDR77 1 0.77 2.57 65 9.6 89.31 23 5.13 No 10 0.97 Yes 0 0 No -22 0.84 Yes 48 79.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1636596 + NM_001163809 WDR81 1 1.36 0.31 16 6.49 80.07 30 6.53 Yes 69 0.56 No 0 0 No -29 0.65 No 41 77.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 1637245 + NM_001163809 WDR81 1 0.66 0.18 9 9.2 85.45 34 5.65 Yes 21 0.12 No 0 0 No -29 0.51 No 42 52.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 1639429 + NM_001163809 WDR81 1 4.45 1.38 51 7.66 87.43 22 5.65 Yes 58 0.8 Yes 0 0 No -25 0.57 No 45 67.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52291476 - NM_025222 WDR82 1 0.04 0.11 8 3.63 80.85 32 8.25 Yes 19 2.22 Yes 0 0 No -31 0.84 Yes 39 86.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12781332 + NM_032332 WDR83 1 1.95 0.71 33 4.84 83.22 92 8.86 Yes 42 1.26 Yes 31 0.74 Yes -27 0.5 No 43 53.54 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 12781379 + NM_032332 WDR83 1 0.73 0.28 20 0.94 76.57 24 5.46 No 66 0.87 Yes 0 0 No -23 0.92 Yes 47 86.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12781524 + NM_032332 WDR83 1 2.76 1.11 45 2.85 84.49 21 5 No 30 1.81 Yes 26 0.9 Yes -20 0.93 Yes 50 87.24 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12779426 - NM_016145 WDR83OS 1 0.37 1.58 55 -2.85 0 9 3.87 No 22 2.53 Yes 28 0.97 Yes -34 0.77 Yes 36 92.85 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12780058 - NM_016145 WDR83OS 1 0.07 0.22 11 -1.92 70.33 20 5.1 No -3 1.6 Yes 0 0 No -19 0.86 Yes 51 47.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 64069175 - NM_001258272 WDR89 1 0.15 0.17 10 7.36 90.79 35 6.55 Yes 39 0.35 No 0 0 No -38 0.7 Yes 33 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64070758 - NM_001258272 WDR89 1 0.2 0.22 12 6.55 89.32 13 3.9 No 38 0.5 No 0 0 No -50 0.58 No 20 37.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64070780 - NM_001258272 WDR89 1 1.28 1.38 52 4.59 72.28 29 5.74 Yes 16 0.51 No 0 0 No -28 0.89 Yes 42 89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 64088448 - NM_001258272 WDR89 1 0.79 0.79 34 9.61 88.31 29 5.74 Yes 16 1.42 Yes 0 0 No -28 0.9 Yes 42 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64089750 - NM_001258272 WDR89 1 0.43 0.46 26 6.11 86.16 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.81 Yes 51 89.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 64096340 - NM_001258272 WDR89 1 0.81 0.17 10 9.49 85.51 28 6.45 Yes 15 1.61 Yes 0 0 No -27 0.74 Yes 43 89.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 700295 + NM_145294 WDR90 1 0.23 0.1 7 6.8 76.67 31 6.36 Yes 53 1.37 Yes 0 0 No -30 0.95 Yes 40 95.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 701823 + NM_145294 WDR90 1 75.77 7.68 72 4.51 82.66 20 5.92 Yes 7 1.68 Yes 19 0.86 Yes -19 0.87 Yes 51 91.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 703757 + NM_145294 WDR90 1 4.73 0.69 34 2.99 0 17 4.58 No 22 1.66 Yes 0 0 No -16 0.61 No 36 52.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 703785 + NM_145294 WDR90 1 1.39 0.22 13 -0.46 56.2 33 6.08 Yes 50 1.63 Yes 0 0 No -32 0.91 Yes 38 83.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 708509 + NM_145294 WDR90 1 4.55 0.67 32 -1.47 67.94 20 5.1 No 7 -0.53 No 18 0.5 Yes -19 0.83 Yes 51 85.51 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 708568 + NM_145294 WDR90 1 7.73 1.17 45 4.19 78.33 26 5.65 Yes 13 1.48 Yes 0 0 No -25 0.83 Yes 45 71.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 709227 + NM_145294 WDR90 1 2.45 0.28 16 6.6 75.08 35 6.4 Yes 49 1.9 Yes 21 0.88 Yes -37 0.66 No 36 71.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 709613 + NM_145294 WDR90 1 31.55 2.63 59 8.74 84.79 21 5.43 No 46 -2.35 No 0 0 No -27 0.65 No 43 68.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 713144 + NM_145294 WDR90 1 6.43 0.39 19 1.7 69.41 73 9.41 Yes 60 1.6 Yes 31 0.05 Yes -53 0.66 No 17 68.26 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 715907 + NM_145294 WDR90 1 0.79 0.17 10 9.39 84.24 62 8.25 Yes 49 -0.32 No 25 0.87 Yes -27 0.76 Yes 50 19.15 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 716421 + NM_145294 WDR90 1 1.03 0.15 9 -5.14 70.47 14 5.2 No 71 -4.84 No 31 0.41 Yes -20 0.15 No 57 27.59 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 716654 + NM_145294 WDR90 1 2.04 0.47 27 5.93 74.8 54 8.02 Yes 41 -1.27 No 25 0.73 Yes -44 0.26 No 18 45.03 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 717513 + NM_145294 WDR90 1 0.54 0.14 8 3.03 80.55 20 4.08 No 59 -3.74 No 20 0.71 Yes -20 0.87 Yes 50 40.74 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 134871961 - NM_014149 WDR91 1 0.09 0.15 8 0.88 72.48 18 4.9 No 76 -1.61 No 26 0.56 Yes -17 0.54 No 53 66.4 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 134873340 - NM_014149 WDR91 1 0.63 0.53 25 3.85 88.77 21 4.69 No 41 -1.14 No 24 0.87 Yes -19 0.93 Yes 51 88.57 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 134875936 - NM_014149 WDR91 1 0.19 0.26 14 6.29 96.34 23 4.9 No 47 0.4 No 0 0 No -20 0.49 No 50 43.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 134876354 - NM_014149 WDR91 1 0.08 0.11 7 4.74 84.41 27 8.17 Yes 14 1.26 Yes 0 0 No -26 0.91 Yes 44 94.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 134878096 - NM_014149 WDR91 1 0.34 0.43 23 3.49 76.07 31 6.63 Yes 67 1.73 Yes 0 0 No -30 0.68 Yes 40 66.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 134878099 - NM_014149 WDR91 1 1.06 1.1 41 5.22 79.51 28 6.4 Yes 64 1.72 Yes 0 0 No -27 0.67 Yes 43 65.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 134878230 - NM_014149 WDR91 1 4.85 5.33 70 9.04 89.8 21 5.74 Yes 8 1.83 Yes 20 0.85 Yes -20 0.89 Yes 50 91.16 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 134879379 - NM_014149 WDR91 1 1.35 1.47 56 9.35 84.79 33 10.15 Yes 20 2.24 Yes 0 0 No -32 0.9 Yes 38 92.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 134879755 - NM_014149 WDR91 1 0.2 0.17 10 6.2 76.53 34 5.74 Yes 72 -3.51 No 0 0 No -30 0.69 Yes 40 65.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 134881872 - NM_014149 WDR91 1 0.59 0.57 28 -3.31 0 59 7.98 Yes 46 1.19 Yes 0 0 No -58 0.63 No 12 77.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 134881876 - NM_014149 WDR91 1 0.11 0.1 7 1.57 76.36 55 7.72 Yes 42 1.2 Yes 0 0 No -31 0.69 Yes 16 71.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 134889146 - NM_014149 WDR91 1 0.2 0.22 12 5.65 80.83 23 5.26 No 53 1.68 Yes 0 0 No -27 0.77 Yes 43 70.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 134889218 - NM_014149 WDR91 1 1.99 2.07 59 8.31 79.93 32 6.04 Yes 39 -0.7 No 31 0.4 Yes -31 0.67 Yes 39 80.65 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 134889457 - NM_014149 WDR91 1 0.18 0.18 12 2.04 74.57 24 7.12 Yes 11 1.86 Yes 0 0 No -23 0.88 Yes 47 89.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 134889460 - NM_014149 WDR91 1 0.2 0.22 12 3.54 85.56 21 6.91 Yes 8 1.86 Yes 0 0 No -20 0.82 Yes 50 90.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 134893743 - NM_014149 WDR91 1 0.27 0.38 21 -4.39 0 18 4.09 No 50 1.22 Yes 0 0 No -62 0.41 No 16 55.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 68363179 - NM_001256476 WDR92 1 4.08 1.08 35 7.27 87 24 5.2 No 11 0.86 Yes 0 0 No -23 0.93 Yes 47 95.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 160097627 - NM_001330279 WDSUB1 1 0.71 0.32 21 9.5 85.29 27 8.11 Yes 14 1.42 Yes 0 0 No -26 0.6 No 44 77.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 160098388 - NM_001330279 WDSUB1 1 0.62 0.25 15 7.49 89.57 30 5.83 Yes 32 1.39 Yes 0 0 No -29 0.66 No 41 72.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 160111045 - NM_001330279 WDSUB1 1 1.93 0.78 26 4.34 87.85 27 5.39 No 36 0.12 No 0 0 No -26 0.74 Yes 44 72.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 160112883 - NM_001330279 WDSUB1 1 0.26 0.11 7 -3.74 0 25 5.88 Yes 16 1.27 Yes 0 0 No -28 0.79 Yes 46 67.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 27599028 + NM_001276252 WDTC1 1 1.35 1 41 8.4 83.26 22 6.32 Yes 9 0.96 Yes 0 0 No -22 0.57 No 49 59.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 27618709 + NM_001276252 WDTC1 1 0.5 0.44 22 2.09 0 24 6.71 Yes 11 2.29 Yes 0 0 No -23 0.78 Yes 47 84.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 27623541 + NM_001276252 WDTC1 1 6.08 4.96 71 0.17 70.84 40 5.59 Yes 6 1.18 Yes 23 0.82 Yes -28 0.47 No 44 74 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 27631549 + NM_001276252 WDTC1 1 2.8 2.06 59 1.17 66.06 30 6.78 Yes 74 2.07 Yes 29 0.94 Yes -29 0.95 Yes 41 93.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 124447681 + NR_133926 WDYHV1 1 17.45 5.35 70 10.03 93.77 23 5.26 No 10 0.38 No 22 0.57 Yes -22 0.76 Yes 48 79.86 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 124450373 + NR_133926 WDYHV1 1 1.16 0.71 27 8.49 85.06 17 6.11 Yes 4 0.3 No 28 0.54 Yes -28 0.61 No 42 74.99 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 9598692 + NM_001143976 WEE1 1 0.23 0.14 10 1.12 0 23 7.19 Yes 10 0.48 No 0 0 No -34 0.74 Yes 36 85.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 9599343 + NM_001143976 WEE1 1 0.36 0.4 23 6.9 79.44 28 6.71 Yes 15 2.32 Yes 0 0 No -27 0.91 Yes 43 96.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9599380 + NM_001143976 WEE1 1 0.14 0.15 9 10.52 79.42 32 6.16 Yes 52 2.33 Yes 0 0 No -31 0.81 Yes 39 82.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9608044 + NM_001143976 WEE1 1 0.75 1.39 50 9.79 82.75 32 5.74 Yes 70 0.05 No 26 0.43 Yes -34 0.33 No 38 36.66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 9609990 + NM_001143976 WEE1 1 0.33 0.47 27 3.99 0 23 6 Yes 10 1.14 Yes 27 0.56 Yes -22 0.77 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 9609997 + NM_001143976 WEE1 1 0.12 0.17 11 -2.07 81.1 30 6.56 Yes 17 1.1 Yes 0 0 No -29 0.81 Yes 41 78.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44099792 + NM_006103 WFDC2 1 0.88 1.21 38 7.56 97.07 24 4.67 No 4 0.5 No 23 0.82 Yes -23 0.85 Yes 47 85.78 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 44108625 + NM_006103 WFDC2 1 0.53 1.1 38 5.51 84.9 12 5.07 No 56 1.6 Yes 0 0 No -18 0.35 No 52 66.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 6296731 + NM_001145853 WFS1 1 1.18 0.24 11 -4.63 0 14 4.47 No 64 1.22 Yes 21 0.7 Yes -39 0.56 No 31 52.05 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 83479323 + NM_001080435 WHAMM 1 0.97 0.15 10 0.8 0 21 4.47 No 8 -2.44 No 0 0 No -18 0.68 Yes 52 66.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 83485446 + NM_001080435 WHAMM 1 0.8 0.38 21 2.43 70.33 29 5.12 No 69 1.4 Yes 0 0 No -28 0.59 No 42 73.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 83485697 + NM_001080435 WHAMM 1 1.15 0.5 26 5.73 82.76 26 5 No 54 0.49 No 0 0 No -25 0.81 Yes 45 92.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 83486289 + NM_001080435 WHAMM 1 0.72 0.28 11 -12.82 80.72 23 4.95 No 10 0.69 No 0 0 No -28 0.5 No 42 61.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 83487530 + NM_001080435 WHAMM 1 0.85 0.19 11 6.72 87.66 26 6.1 Yes 65 -4.11 No 0 0 No -26 0.71 Yes 44 81.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 83490462 + NM_001080435 WHAMM 1 20.25 6.43 72 10.29 93.5 28 6.53 Yes 15 1.94 Yes 0 0 No -27 0.92 Yes 43 91.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 83495139 + NM_001080435 WHAMM 1 5.4 2.33 63 2.9 64.3 19 5.56 Yes 29 0.6 No 27 0.66 Yes -58 0.62 No 12 70.96 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 32815407 - NR_036650 WHAMMP1 1 1.34 0.1 7 -1.51 0 11 4.12 No 8 1.05 Yes 0 0 No -31 0.5 No 39 58.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 32816802 - NR_036650 WHAMMP1 1 16.23 1.42 49 10.29 93.5 28 6.52 Yes 15 1.94 Yes 27 0.94 Yes -27 0.89 Yes 43 91.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 32819715 - NR_036650 WHAMMP1 1 1.51 0.4 19 6.72 87.66 26 5.05 No 65 -4.11 No 0 0 No -25 0.87 Yes 45 83.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 175432666 - NM_003387 WIPF1 1 0.07 0.15 7 10.92 83.28 24 5.48 No 55 0.77 Yes 0 0 No -27 0.71 Yes 43 55.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 175439670 - NM_003387 WIPF1 1 0.05 0.24 13 8.35 85.65 35 7.55 Yes 22 1.67 Yes 34 0.89 Yes -34 0.69 Yes 36 80.74 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 175440100 - NM_003387 WIPF1 1 0.09 0.21 12 -4.19 0 14 4.24 No 55 -2.98 No 28 0.21 Yes -39 0.58 No 31 51.1 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 175462587 - NM_003387 WIPF1 1 7.13 2.32 59 7.19 92.13 22 4.9 No 49 0.27 No 22 0.69 Yes -21 0.6 No 49 73.75 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 175474807 - NM_003387 WIPF1 1 0.71 0.19 11 6.66 85.01 18 4.31 No 38 0.27 No 0 0 No -29 0.32 No 39 49.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 175481259 - NM_003387 WIPF1 1 0.73 0.26 16 9.11 77.93 23 5.39 No 72 -3.66 No 0 0 No -22 0.81 Yes 48 90.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 175488237 - NM_003387 WIPF1 1 0.87 0.31 13 8.91 89.74 21 4.99 No 8 1.73 Yes 20 0.84 Yes -34 0.84 Yes 36 75.52 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 175490689 - NM_003387 WIPF1 1 4.82 1.32 48 9.09 79.77 30 4.7 No 67 0.19 No 29 0.67 Yes -29 0.87 Yes 41 79.45 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 175494597 - NM_003387 WIPF1 1 8.3 2.46 63 9.62 96.94 31 6 Yes 53 0.94 Yes 30 0.55 Yes -30 0.57 No 40 62.95 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 175495289 - NM_003387 WIPF1 1 2.27 0.69 28 5.59 66.65 25 5.57 Yes 12 1.18 Yes 24 0.86 Yes -24 0.75 Yes 46 83.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 175495354 - NM_003387 WIPF1 1 0.85 0.25 14 5.89 83.27 49 7.66 Yes 36 1.85 Yes 24 0.6 Yes -24 0.67 Yes 33 64.28 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 175495954 - NM_003387 WIPF1 1 0.72 0.17 10 7.03 82.93 29 7.94 Yes 16 0.19 No 0 0 No -28 0.42 No 42 80.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 175498642 - NM_003387 WIPF1 1 5 1.51 50 3.1 67.93 77 7.9 Yes 64 1.3 Yes 0 0 No -53 0.56 No 17 62.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 38382650 + NM_133264 WIPF2 1 0.69 0.22 11 7.28 85.02 30 7.7 Yes 17 1.49 Yes 0 0 No -29 0.87 Yes 41 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 38405168 + NM_133264 WIPF2 1 0.39 0.15 9 7.82 86.57 28 4.15 No 9 0.13 No 0 0 No -27 0.44 No 42 48.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 38416460 + NM_133264 WIPF2 1 0.92 0.4 20 12.13 100 41 4.67 No 28 0.45 No 0 0 No -37 0.41 No 34 59.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 66423398 - NM_001320772 WIPI1 1 0.28 0.19 13 0.61 67.83 39 5.97 Yes 10 1.09 Yes 25 0.81 Yes -38 0.48 No 26 66.31 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 66426223 - NM_001320772 WIPI1 1 0.33 0.24 13 7.83 85.14 18 4.7 No 76 0.41 No 0 0 No -30 0.85 Yes 40 85.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 66434087 - NM_001320772 WIPI1 1 0.16 0.13 9 8.81 85.05 31 6.4 Yes 38 1.25 Yes 0 0 No -30 0.87 Yes 40 78.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 66437391 - NM_001320772 WIPI1 1 0.47 0.36 20 4.89 82.98 62 7.97 Yes 49 1.54 Yes 0 0 No -22 0.57 No 48 30.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 66437781 - NM_001320772 WIPI1 1 1.36 1.18 46 9.75 83.48 27 5.1 No 14 1.1 Yes 0 0 No -26 0.96 Yes 44 96.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 66444624 - NM_001320772 WIPI1 1 0.51 0.32 18 4.74 71.96 33 5.74 Yes 20 1.26 Yes 25 0.29 Yes -32 0.84 Yes 38 73.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 5256195 + NM_001033520 WIPI2 1 0.16 0.29 15 0.96 80.84 33 7.94 Yes 20 0.65 No 22 0.92 Yes -32 0.93 Yes 38 97.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 5256379 + NM_001033520 WIPI2 1 0.19 0.31 17 9.08 91.79 24 5.1 No 40 1.1 Yes 23 0.92 Yes -23 0.71 Yes 47 81.99 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 15536476 - NM_021241 WIZ 1 0.32 0.18 11 5.5 70.82 24 5.36 No 1 0.7 No 0 0 No -23 0.92 Yes 47 73.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 899454 + NM_213655 WNK1 1 0.06 0.24 12 8.7 88.76 57 7.97 Yes 61 0.94 Yes 0 0 No -30 0.53 No 40 55.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 938227 + NM_213655 WNK1 1 0.19 0.75 35 10.52 91.12 27 5.88 Yes 14 1.02 Yes 0 0 No -33 0.44 No 44 61.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 939085 + NM_213655 WNK1 1 0.76 3.06 68 10.94 92.52 74 8.48 Yes 61 2.55 Yes 29 0.34 Yes -27 0.53 No 46 46.11 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 939177 + NM_213655 WNK1 1 0.03 0.11 8 -2.6 0 17 4.2 No 17 1.17 Yes 0 0 No -35 0.47 No 41 54.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 968412 + NM_213655 WNK1 1 0.03 0.14 9 -13.1 0 48 11.9 Yes 35 1.88 Yes 0 0 No -47 0.89 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 970182 + NM_213655 WNK1 1 0.03 0.11 8 0.82 0 98 11.09 Yes 13 0.53 No 0 0 No -26 0.75 Yes 44 61.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 987380 + NM_213655 WNK1 1 22.2 26.06 72 4.32 89.99 26 7.31 Yes 13 0.62 No 22 0.69 Yes -25 0.52 No 45 63.9 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 987437 + NM_213655 WNK1 1 0.18 0.21 14 5.79 85.92 11 4.9 No 70 0.59 No 0 0 No -17 0.34 No 53 54.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 982223 + NM_213655 WNK1 1 0.09 0.1 7 8.47 83.7 28 7.61 Yes 15 0.73 No 0 0 No -27 0.78 Yes 43 84.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 987380 + NM_213655 WNK1 1 65.41 77.64 72 4.32 89.99 26 7.31 Yes 13 0.62 No 22 0.69 Yes -25 0.52 No 45 63.9 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 987383 + NM_213655 WNK1 1 0.1 0.13 7 -1.49 0 15 3.87 No 16 0.6 No 0 0 No -28 0.52 No 42 62.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 987437 + NM_213655 WNK1 1 0.35 0.42 23 5.79 85.92 11 4.9 No 70 0.59 No 0 0 No -17 0.34 No 53 54.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 988738 + NM_213655 WNK1 1 7.88 17.42 72 7.24 86.63 35 6.21 Yes 22 0.87 Yes 34 0.75 Yes -34 0.69 Yes 36 81.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 989886 + NM_213655 WNK1 1 48.91 108.31 72 10.47 92.27 27 10.2 Yes 14 2.25 Yes 22 0.94 Yes -26 0.66 No 44 83.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 990310 + NM_213655 WNK1 1 0.04 0.1 7 7.89 91.87 26 6.9 Yes 2 0.98 Yes 0 0 No -25 0.83 Yes 45 85.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 991099 + NM_213655 WNK1 1 0.06 0.19 10 5.25 0 15 4.58 No 44 0.39 No 0 0 No -57 0.41 No 20 51.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 1003728 + NM_213655 WNK1 1 0.06 0.15 9 -11.81 0 32 5.97 Yes 19 0.84 Yes 0 0 No -31 0.92 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 219746965 + NM_025216 WNT10A 1 0.97 0.46 26 2.93 79.05 25 5.02 No -2 0.8 Yes 0 0 No -24 0.79 Yes 46 87.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 219747441 + NM_025216 WNT10A 1 0.14 0.11 7 5.24 80.21 23 7.6 Yes 10 0.39 No 0 0 No -22 0.88 Yes 48 92.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 219747486 + NM_025216 WNT10A 1 0.25 0.11 7 5.27 71.81 14 7.34 Yes 1 1.24 Yes 0 0 No -34 0.45 No 30 52.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 219748876 + NM_025216 WNT10A 1 1.08 0.56 31 10.76 80.91 58 5.62 Yes 74 1.34 Yes 0 0 No -49 0.59 No 21 74.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 219753059 + NM_025216 WNT10A 1 0.24 0.14 8 6.73 84.59 23 5.1 No 31 0.07 No 0 0 No -23 0.76 Yes 47 71.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 219757499 + NM_025216 WNT10A 1 0.64 0.31 18 1.75 0 24 7.34 Yes 11 1.53 Yes 0 0 No -23 0.92 Yes 47 94.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7604744 + NM_001143990 WRAP53 1 0.31 0.14 9 9.47 85 40 6.63 Yes 71 0.81 Yes 22 0.42 Yes -29 0.52 No 48 59.7 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 7604311 + NM_001143990 WRAP53 1 0.3 0.18 12 12.62 88.27 36 6.48 Yes 23 0.63 No 0 0 No -26 0.8 Yes 35 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7604744 + NM_001143990 WRAP53 1 2.29 1.24 44 9.47 85 40 6.63 Yes 71 0.81 Yes 22 0.42 Yes -29 0.52 No 48 59.7 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 7604758 + NM_001143990 WRAP53 1 0.69 0.36 17 1.04 67.69 19 4.8 No 50 -1.14 No 20 0.83 Yes -18 0.8 Yes 52 71.86 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 3548721 - NM_017818 WRAP73 1 0.76 0.49 21 9.87 84.98 44 6.61 Yes 31 2 Yes 0 0 No -27 0.84 Yes 43 87.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 3548882 - NM_017818 WRAP73 1 3.41 3.53 66 3.02 78.87 19 5 No 41 0.47 No 0 0 No -23 0.43 No 49 62.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 3565269 - NM_017818 WRAP73 1 0.08 0.13 7 7.56 92.16 21 6.83 Yes 8 0.74 No 0 0 No -21 0.69 Yes 49 85.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 30915898 + NM_000553 WRN 1 1.96 0.97 40 7.83 0 14 4.47 No 16 1.08 Yes 0 0 No -20 0.38 No 42 89.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 30916610 + NM_000553 WRN 1 0.36 0.21 14 3.88 90.06 17 5.18 No 4 0.84 Yes 0 0 No -20 0.87 Yes 50 89.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 30921258 + NM_000553 WRN 1 1.71 0.85 35 9.19 85.51 31 6.53 Yes 38 0.41 No 0 0 No -24 0.46 No 46 73.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 30922441 + NM_000553 WRN 1 0.14 0.13 7 5.36 0 16 4.47 No 63 -4.33 No 0 0 No -28 0.76 Yes 42 71.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 30939461 + NM_000553 WRN 1 0.34 0.19 14 6.53 86.16 20 5.56 Yes 7 1.07 Yes 0 0 No -28 0.44 No 51 65.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 30947958 + NM_000553 WRN 1 1.86 0.61 28 0.81 47.23 39 6.39 Yes 26 0.29 No 24 0.38 Yes -38 0.74 Yes 32 67.04 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 30950479 + NM_000553 WRN 1 0.52 0.24 15 11.02 94.82 43 6.78 Yes 66 1.24 Yes 0 0 No -39 0.69 Yes 31 76.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 30966000 + NM_000553 WRN 1 0.9 0.43 23 9.64 92.78 29 6.78 Yes 16 1.21 Yes 0 0 No -28 0.72 Yes 42 78.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 30978678 + NM_000553 WRN 1 0.39 0.18 11 11.29 83.09 28 6.24 Yes 15 0.32 No 0 0 No -27 0.53 No 47 61.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 30987591 + NM_000553 WRN 1 2.33 0.63 26 4.69 73.53 17 5.57 Yes 4 1.44 Yes 0 0 No -16 0.81 Yes 54 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 30997552 + NM_000553 WRN 1 0.2 0.14 7 2.3 84.41 60 7.99 Yes 47 0.41 No 0 0 No -44 0.51 No 26 67.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 31012143 + NM_000553 WRN 1 0.37 0.18 11 -0.65 0 103 11.21 Yes 22 1.2 Yes 0 0 No -34 0.49 No 36 66.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 31014886 + NM_000553 WRN 1 0.58 0.29 16 1.53 80.19 32 6.8 Yes 3 1.61 Yes 0 0 No -31 0.92 Yes 39 90.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 31016040 + NM_000553 WRN 1 0.49 0.24 12 5.29 82.89 23 6.5 Yes 10 0.68 No 0 0 No -22 0.6 No 48 67.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 2770428 + NM_020135 WRNIP1 1 0.3 0.35 20 7.9 90.68 81 6.34 Yes 5 0.81 Yes 25 0.68 Yes -33 0.45 No 53 42.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 2770428 + NM_020135 WRNIP1 1 4.7 4.96 69 7.9 90.68 81 6.34 Yes 5 0.81 Yes 25 0.68 Yes -33 0.45 No 53 42.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 2773171 + NM_020135 WRNIP1 1 0.19 0.32 17 11.53 96.43 16 6.61 Yes 3 0.9 Yes 0 0 No -29 0.46 No 42 59.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 2773221 + NM_020135 WRNIP1 1 1.28 1.67 58 6.65 78.12 18 6.57 Yes 53 0.87 Yes 0 0 No -34 0.64 No 36 70.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 2785090 + NM_020135 WRNIP1 1 0.34 0.26 18 11.56 83.87 27 5.39 No 40 1.72 Yes 0 0 No -26 0.77 Yes 44 95.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 25624212 + NM_015626 WSB1 1 0.53 0.78 34 4.1 82.22 41 7.07 Yes 28 1.45 Yes 34 0.77 Yes -23 0.52 No 36 51.92 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 25628792 + NM_015626 WSB1 1 0.24 0.35 18 0.5 74.96 32 6.63 Yes 47 -3.31 No 31 0.85 Yes -31 0.94 Yes 39 95.66 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 25628906 + NM_015626 WSB1 1 0.49 0.68 31 8.06 90.76 28 7 Yes 60 0.51 No 27 0.45 Yes -27 0.72 Yes 43 76.3 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 25630708 + NM_015626 WSB1 1 0.07 0.15 9 6.8 88.04 28 5.7 Yes 25 0.16 No 0 0 No -28 0.62 No 43 56.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 25632072 + NM_015626 WSB1 1 0.19 0.26 15 9.07 72.3 34 5.84 Yes -4 0.59 No 0 0 No -30 0.66 Yes 37 76.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 25634769 + NM_015626 WSB1 1 18.39 23.78 72 10.61 91.27 44 6.92 Yes 44 1.16 Yes 27 0.68 Yes -27 0.61 No 43 64.37 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 25635629 + NM_015626 WSB1 1 0.27 0.39 17 10.68 87.52 27 4.83 No 67 0.94 Yes 0 0 No -21 0.72 Yes 49 68.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 25638849 + NM_015626 WSB1 1 0.12 0.25 13 8.22 88.27 27 6.63 Yes 14 1.37 Yes 0 0 No -26 0.93 Yes 44 92.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118476186 - NM_001278557 WSB2 1 0.11 0.24 14 -0.7 0 11 4.12 No 21 1.16 Yes 0 0 No -33 0.96 Yes 37 96.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 118481042 - NM_001278557 WSB2 1 0.11 0.18 11 6.48 83.49 27 5.74 Yes 14 0.08 No 0 0 No -26 0.95 Yes 44 93.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 118481045 - NM_001278557 WSB2 1 0.07 0.11 8 5.89 81.27 24 5.48 No 11 0.1 No 0 0 No -23 0.95 Yes 47 94.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 160162393 + NM_152857 WTAP 1 0.54 1.56 28 10.03 91.37 33 5.6 Yes 66 -3.29 No 0 0 No -32 0.42 No 38 43.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 10047772 + NM_015691 WWC3 1 2.77 0.28 17 3.63 0 11 4.12 No 8 0.49 No 0 0 No -20 0.66 No 50 54.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 10071080 + NM_015691 WWC3 1 1.12 0.21 13 4.44 86.16 23 4.77 No 10 0.41 No 0 0 No -22 0.95 Yes 48 94.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 10075670 + NM_015691 WWC3 1 1.16 0.18 13 10.14 91.17 36 7.28 Yes 49 1.91 Yes 0 0 No -31 0.73 Yes 39 90.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 10090661 + NM_015691 WWC3 1 2 0.28 17 2 79.41 30 8.24 Yes 17 2.27 Yes 0 0 No -29 0.85 Yes 41 86.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 10096099 + NM_015691 WWC3 1 0.71 0.14 8 8.95 82.6 30 5.48 No 72 0.65 No 0 0 No -23 0.71 Yes 47 78.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 78145716 + NM_001291997 WWOX 1 3.65 1.29 48 10.76 86.68 15 4.75 No 2 0.83 Yes 24 0.79 Yes -24 0.6 No 47 67.78 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 78151110 + NM_001291997 WWOX 1 2.68 0.47 24 3.37 79.64 48 5.23 No 35 1.13 Yes 0 0 No -31 0.5 No 45 63.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 78152851 + NM_001291997 WWOX 1 17.52 3.38 70 5.58 83.95 34 6.93 Yes 21 2.07 Yes 33 0.89 Yes -33 0.93 Yes 37 97.41 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 78262676 + NM_001291997 WWOX 1 4.66 0.29 16 9.53 90.84 25 5.13 No 12 0.71 No 0 0 No -28 0.91 Yes 42 97.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 78293904 + NM_001291997 WWOX 1 3.83 0.26 16 4.55 61.51 25 5.25 No 12 0.83 Yes 0 0 No -24 0.61 No 46 51.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 78312499 + NM_001291997 WWOX 1 45.35 3.13 49 10.41 92.83 41 6.58 Yes 28 0.13 No 30 0.63 Yes -28 0.36 No 40 56.99 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 78337234 + NM_001291997 WWOX 1 7.5 0.54 30 7.7 95.07 50 6.9 Yes 10 0.62 No 0 0 No -22 0.96 Yes 48 96.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 78466392 + NM_001291997 WWOX 1 1.16 0.17 11 0.31 0 12 3.94 No 19 0.36 No 0 0 No -31 0.94 Yes 39 91.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 87383657 + NM_007013 WWP1 1 0.19 0.14 9 8.23 95.59 26 4.86 No 10 0.6 No 0 0 No -22 0.47 No 48 55.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 87389508 + NM_007013 WWP1 1 0.36 0.32 19 7.95 92.4 29 7 Yes 16 1.59 Yes 0 0 No -28 0.92 Yes 42 91.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 87398178 + NM_007013 WWP1 1 0.25 0.21 15 8.12 86.34 28 7.05 Yes 15 1.41 Yes 0 0 No -27 0.95 Yes 43 97.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 87399064 + NM_007013 WWP1 1 0.14 0.11 7 3.63 79.17 29 5.16 No 62 0.75 No 28 0.89 Yes -28 0.95 Yes 42 94.99 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 87410777 + NM_007013 WWP1 1 0.47 0.44 22 -3.06 53.54 25 4.9 No 49 0.96 Yes 25 0.54 Yes -24 0.72 Yes 46 20.49 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 87410803 + NM_007013 WWP1 1 6.74 6.56 72 5.53 79.23 36 5.92 Yes 75 0.99 Yes 0 0 No -28 0.41 No 42 47.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 87421483 + NM_007013 WWP1 1 0.18 0.18 12 10.58 95.16 59 12.27 Yes 46 2.05 Yes 0 0 No -52 0.62 No 22 71.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 87452854 + NM_007013 WWP1 1 0.24 0.25 15 12.12 88.48 23 5.9 Yes 10 1.11 Yes 29 0.89 Yes -29 0.76 Yes 41 89.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 87470170 + NM_007013 WWP1 1 0.23 0.15 9 6.01 81.68 31 5.48 No 29 1.41 Yes 0 0 No -30 0.64 No 40 84.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 87474006 + NM_007013 WWP1 1 0.42 0.39 20 -6.08 0 31 6.05 Yes 18 0.31 No 0 0 No -29 0.42 No 41 67.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 87479262 + NM_007013 WWP1 1 0.29 0.32 17 11.25 85.65 27 5.56 Yes 14 0.54 No 0 0 No -26 0.9 Yes 44 91.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 69808596 + NM_001270455 WWP2 1 0.26 0.1 7 7.14 88.79 29 5 No 16 1.22 Yes 28 0.76 Yes -28 0.95 Yes 42 96.95 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 69808981 + NM_001270455 WWP2 1 0.44 0.14 7 7.76 80.72 19 5.48 No 6 0.6 No 26 0.4 Yes -23 0.46 No 47 64.09 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 69810091 + NM_001270455 WWP2 1 58.07 18.49 72 10.48 83.1 20 5.06 No 7 1.18 Yes 24 0.9 Yes -26 0.93 Yes 44 92.8 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 69816934 + NM_001270455 WWP2 1 2.54 0.83 40 4.74 84.41 37 4.71 No 45 1.05 Yes 0 0 No -41 0.74 Yes 29 80.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 69816958 + NM_001270455 WWP2 1 1.42 0.5 23 8.47 88.87 15 5.13 No 2 1.61 Yes 0 0 No -26 0.56 No 44 52.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 69817008 + NM_001270455 WWP2 1 2.31 0.74 35 5.86 89.47 22 5.22 No 52 1.55 Yes 0 0 No -21 0.63 No 49 84.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 69833061 + NM_001270455 WWP2 1 0.22 0.18 11 1.73 68.99 38 4.91 No 39 0.28 No 24 0.74 Yes -24 0.58 No 13 31.02 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 69922064 + NM_001270455 WWP2 1 0.25 0.18 10 6.36 81.44 38 7.02 Yes 55 1.45 Yes 0 0 No -24 0.54 No 46 75.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 7689272 - NM_020196 XAB2 1 0.63 0.78 38 5.44 75.38 22 4.36 No 74 1.82 Yes 0 0 No -21 0.84 Yes 49 76.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7690898 - NM_020196 XAB2 1 0.22 0.25 16 7.89 83.08 15 5.44 No 52 1.03 Yes 0 0 No -23 0.6 No 47 66.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 6659506 + NR_046398 XAF1 1 0.31 0.31 19 1.55 78.52 21 4.8 No 62 -0.09 No 0 0 No -20 0.55 No 52 55.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 6670670 + NR_046398 XAF1 1 0.09 0.11 7 2.06 0 14 4.24 No 68 0.78 Yes 0 0 No -19 0.38 No 39 34.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 6673085 + NR_046398 XAF1 1 0.15 0.15 9 7.12 91.65 15 5.64 Yes 76 1.29 Yes 0 0 No -27 0.89 Yes 43 88.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29191654 - NM_001079539 XBP1 1 0.17 2.64 63 6.21 82.01 26 5.91 Yes 51 1.18 Yes 0 0 No -25 0.79 Yes 45 83.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29193216 - NM_001079539 XBP1 1 0.01 0.18 11 0.44 0 18 4.58 No 14 0.19 No 26 0.86 Yes -26 0.35 No 43 48.87 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 123016370 + NM_001167 XIAP 1 0.59 0.13 7 5.24 76.01 39 7.92 Yes 26 0.52 No 0 0 No -38 0.77 Yes 32 94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 123019485 + NM_001167 XIAP 1 3.3 0.61 31 1.38 0 26 7.92 Yes 13 0.99 Yes 0 0 No -25 0.86 Yes 45 85.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 28290695 + NM_018053 XKR8 1 14.44 0.69 29 10.07 88.27 36 8.06 Yes 23 1.81 Yes 35 0.9 Yes -35 0.91 Yes 35 92.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 28291861 + NM_018053 XKR8 1 9.69 0.64 32 7.7 84.44 39 5.82 Yes 26 -1.45 No 0 0 No -34 0.9 Yes 36 90.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 28292229 + NM_018053 XKR8 1 1.95 0.13 8 1.46 0 20 4.58 No 10 0.72 No 0 0 No -22 0.91 Yes 48 84.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 100454567 - NR_027302 XPA 1 1.06 0.47 23 3.28 0 37 8.2 Yes 24 1.18 Yes 0 0 No -34 0.59 No 34 64.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 14187114 - NM_004628 XPC 1 2.01 3.53 59 10.96 82.11 24 5.48 No 60 0.76 No 0 0 No -29 0.55 No 49 75.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 14188169 - NM_004628 XPC 1 0.16 0.28 15 7.79 83.05 31 8.72 Yes 4 0.97 Yes 0 0 No -30 0.75 Yes 40 82.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 14189333 - NM_004628 XPC 1 0.93 1.5 45 10.73 92.55 26 5.37 No 13 0.96 Yes 0 0 No -25 0.95 Yes 45 94.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 14193890 - NM_004628 XPC 1 0.79 1.64 44 5.52 86.88 32 6 Yes 47 0.96 Yes 0 0 No -31 0.44 No 54 46.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 14195534 - NM_004628 XPC 1 1.44 2.67 64 11.59 84.36 37 6.37 Yes 24 0.77 Yes 0 0 No -36 0.76 Yes 48 67.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 14200387 - NM_004628 XPC 1 0.25 0.51 29 -7.37 0 9 2.74 No 6 0.16 No 0 0 No -28 0.51 No 42 61.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 14201329 - NM_004628 XPC 1 0.07 0.18 10 -13.22 0 28 6.32 Yes 15 0.7 No 0 0 No -27 0.55 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 14209099 - NM_004628 XPC 1 0.21 0.35 20 2.67 66.9 29 6.64 Yes 70 -6.08 No 0 0 No -28 0.59 No 42 17.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 14214241 - NM_004628 XPC 1 0.07 0.18 10 7.13 83.01 12 5.25 No 35 0.69 No 0 0 No -30 0.43 No 52 46.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 111627345 - NM_001324136 XPNPEP1 1 1.2 1.75 52 7.92 89.67 20 4.96 No 66 1.11 Yes 0 0 No -19 0.69 Yes 51 51.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 111644838 - NM_001324136 XPNPEP1 1 0.14 0.15 9 8.77 79.94 34 5.18 No 18 0.62 No 0 0 No -33 0.53 No 37 62.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 111653869 - NM_001324136 XPNPEP1 1 1.84 1.51 54 6.65 85.56 21 6.77 Yes 8 1.5 Yes 26 0.47 Yes -20 0.6 No 50 76.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 111665803 - NM_001324136 XPNPEP1 1 0.14 0.13 8 9.45 83.42 20 7.62 Yes 7 1.85 Yes 0 0 No -19 0.77 Yes 51 77.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 111673842 - NM_001324136 XPNPEP1 1 1.86 1.64 52 10.73 86.44 31 5.83 Yes 28 0.9 Yes 0 0 No -30 0.76 Yes 40 63.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 41266051 + NM_022098 XPNPEP3 1 8.56 4.31 67 7.1 86.63 30 5.2 No 0 1.29 Yes 33 0.85 Yes -33 0.8 Yes 37 85.67 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 41279155 + NM_022098 XPNPEP3 1 0.28 0.18 10 5.1 77.66 40 5.6 Yes 27 1.99 Yes 0 0 No -20 0.49 No 50 52.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41284432 + NM_022098 XPNPEP3 1 1.24 0.58 32 6.96 79.84 21 7.94 Yes 8 1.26 Yes 20 0.72 Yes -20 0.73 Yes 50 88.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 41286973 + NM_022098 XPNPEP3 1 0.27 0.13 9 6.77 87.23 63 7.51 Yes 50 0.7 No 0 0 No -25 0.96 Yes 45 93.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 41291044 + NM_022098 XPNPEP3 1 0.74 0.35 21 9.72 84.61 29 6.45 Yes 16 1.51 Yes 0 0 No -28 0.85 Yes 42 90.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61708391 - NM_003400 XPO1 1 0.03 0.14 10 2.18 87.38 17 4.26 No 36 0.31 No 0 0 No -21 0.82 Yes 49 76.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61715905 - NM_003400 XPO1 1 0.02 0.11 8 -22.19 0 33 5.94 Yes 55 0.56 No 0 0 No -37 0.41 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61719332 - NM_003400 XPO1 1 0.09 0.68 32 -1.21 80.72 26 5.28 No 61 0.35 No 0 0 No -24 0.33 No 46 37.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61719857 - NM_003400 XPO1 1 0.36 1.88 58 3.56 72.53 16 3.65 No 50 0.78 Yes 0 0 No -24 0.57 No 46 55.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 61721245 - NM_003400 XPO1 1 0.09 0.43 23 3.62 79.62 24 4.76 No 11 0.7 No 22 0.92 Yes -23 0.8 Yes 47 76.81 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 61729172 - NM_003400 XPO1 1 0.04 0.18 12 -1.21 0 24 5 No 29 1.06 Yes 0 0 No -28 0.83 Yes 42 85.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61738065 - NM_003400 XPO1 1 0.04 0.29 17 1.09 0 33 6.94 Yes 20 1.58 Yes 0 0 No -32 0.74 Yes 38 76.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61738070 - NM_003400 XPO1 1 0.03 0.21 14 2.79 84.41 28 6.61 Yes 15 1.6 Yes 0 0 No -27 0.81 Yes 43 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61741319 - NM_003400 XPO1 1 0.03 0.19 11 1.27 84.41 20 5.1 No 7 1.06 Yes 0 0 No -19 0.86 Yes 51 92.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61743848 - NM_003400 XPO1 1 0.08 0.49 27 4.73 80.45 39 6.28 Yes 10 0.21 No 0 0 No -22 0.7 Yes 48 58.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 61747611 - NM_003400 XPO1 1 0.16 0.96 42 9.69 84.6 29 7.75 Yes 16 1.1 Yes 0 0 No -28 0.73 Yes 42 72.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61752239 - NM_003400 XPO1 1 0.09 0.51 28 6.77 84.06 28 5.28 No 10 0.53 No 0 0 No -22 0.75 Yes 48 77.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61752469 - NM_003400 XPO1 1 6.28 32.86 72 5.6 76.83 37 5.39 No 2 0.78 Yes 23 0.7 Yes -36 0.8 Yes 34 91.17 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 61752657 - NM_003400 XPO1 1 0.33 1.86 57 -11 54.51 24 5.75 Yes 11 0.28 No 0 0 No -30 0.3 No 33 34.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 61752695 - NM_003400 XPO1 1 0.62 3.54 65 3.29 79.15 25 4.9 No 44 0.65 No 0 0 No -24 0.89 Yes 46 84.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61752710 - NM_003400 XPO1 1 0.11 0.67 32 0.43 67.07 23 5.19 No 73 1.27 Yes 0 0 No -22 0.88 Yes 48 93.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 61752831 - NM_003400 XPO1 1 0.03 0.17 11 9.63 78.32 29 5.31 No 66 0.74 No 0 0 No -28 0.9 Yes 42 88.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61756295 - NM_003400 XPO1 1 0.23 1.43 57 8.2 84.17 31 5.33 No 33 0.48 No 0 0 No -30 0.73 Yes 40 80.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 61761654 - NM_003400 XPO1 1 0.04 0.14 10 4.03 85.02 17 6.93 Yes 4 1.17 Yes 22 0.75 Yes -27 0.75 Yes 43 72.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 61761790 - NM_003400 XPO1 1 0.72 2.47 58 5.23 90.62 15 3.64 No 45 1.09 Yes 0 0 No -26 0.34 No 13 80.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 61761814 - NM_003400 XPO1 1 2.13 7.83 71 3.17 83.14 34 8.26 Yes 21 1.1 Yes 33 0.78 Yes -33 0.66 No 37 82.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 61764103 - NM_003400 XPO1 1 0.05 0.21 12 5.81 77.91 32 6.16 Yes 19 -1.29 No 0 0 No -21 0.69 Yes 49 73.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 21361735 - NM_022459 XPO4 1 0.67 0.51 27 -9.04 0 35 6.06 Yes 55 0.5 No 0 0 No -35 0.41 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 21361763 - NM_022459 XPO4 1 0.49 0.38 23 2.31 69.74 52 6.6 Yes 27 0.51 No 27 0.53 Yes -40 0.49 No 24 68.42 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr13 21374460 - NM_022459 XPO4 1 0.26 0.32 17 -2.92 0 35 6.89 Yes 76 1.21 Yes 0 0 No -34 0.8 Yes 36 95.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21396445 - NM_022459 XPO4 1 0.15 0.14 8 1.34 67.05 28 4.89 No 62 0.58 No 25 0.62 Yes -30 0.58 No 40 77.59 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr13 21430142 - NM_022459 XPO4 1 0.26 0.31 17 10.89 91.41 16 5.29 No 17 0.68 No 0 0 No -29 0.65 No 41 56.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 21437263 - NM_022459 XPO4 1 8.49 7.65 71 7.13 78.95 20 4.96 No 39 1.77 Yes 20 0.5 Yes -51 0.78 Yes 19 59.44 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 21437263 - NM_022459 XPO4 1 0.78 0.69 32 7.13 78.95 20 4.96 No 39 1.77 Yes 20 0.5 Yes -51 0.78 Yes 19 59.44 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 21437279 - NM_022459 XPO4 1 1.26 1.18 45 7.5 82.58 36 7.32 Yes 23 1.77 Yes 20 0.5 Yes -35 0.75 Yes 35 65.6 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 21442875 - NM_022459 XPO4 1 0.13 0.1 7 2.8 0 15 3.25 No 12 0.53 No 26 0.45 Yes -19 0.57 No 46 59.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr13 21455858 - NM_022459 XPO4 1 0.5 0.32 19 1.89 72.16 26 5.19 No 70 1.39 Yes 0 0 No -25 0.95 Yes 45 93.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21461991 - NM_022459 XPO4 1 0.55 0.33 21 2.78 0 47 7.23 Yes 34 2.06 Yes 0 0 No -46 0.62 No 30 68.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 21473138 - NM_022459 XPO4 1 3.59 2.44 64 6.54 86.62 26 6.34 Yes 13 0.63 No 0 0 No -25 0.75 Yes 45 65.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 21475555 - NM_022459 XPO4 1 0.84 0.49 22 5.09 75.72 13 4.43 No 26 1.34 Yes 0 0 No -38 0.41 No 32 58.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43492269 - NM_020750 XPO5 1 0.52 0.6 28 9.52 82.7 30 5.36 No 3 0.45 No 0 0 No -24 0.78 Yes 46 79.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43493693 - NM_020750 XPO5 1 0.2 0.32 19 6.11 81.14 31 5.46 No 47 1.42 Yes 30 0.58 Yes -30 0.43 No 45 31.37 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 43494692 - NM_020750 XPO5 1 0.25 0.24 12 5.83 88.52 13 5.28 No 0 0.83 Yes 0 0 No -25 0.79 Yes 45 85.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43501763 - NM_020750 XPO5 1 0.08 0.13 7 -8.98 0 14 3.4 No 7 -2.04 No 0 0 No -48 0.51 No 22 51.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43504494 - NM_020750 XPO5 1 0.07 0.1 7 12.17 88.27 42 6.86 Yes 29 1.16 Yes 0 0 No -42 0.47 No 29 57.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 43510550 - NM_020750 XPO5 1 0.1 0.17 9 8.97 86.24 31 5.67 Yes 59 0.04 No 0 0 No -30 0.91 Yes 40 95.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43515191 - NM_020750 XPO5 1 0.76 1.03 42 9.97 83.63 27 5.74 Yes 14 1.83 Yes 26 0.9 Yes -26 0.72 Yes 44 90.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 43519066 - NM_020750 XPO5 1 0.69 0.86 38 10.53 90.23 35 8.52 Yes 22 1.96 Yes 0 0 No -34 0.72 Yes 36 79.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43534957 - NM_020750 XPO5 1 0.17 0.18 11 5.66 76.03 10 6 Yes 26 0.01 No 0 0 No -34 0.42 No 41 61.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 43536472 - NM_020750 XPO5 1 1.57 2.18 61 1.53 76.4 34 8.01 Yes 25 0.01 No 0 0 No -37 0.51 No 33 76.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 28109980 - NM_001270940 XPO6 1 0.12 0.31 17 7.32 81.28 24 7.48 Yes 11 1.16 Yes 21 0.73 Yes -23 0.86 Yes 47 90.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 28110132 - NM_001270940 XPO6 1 0.11 0.29 17 12.67 89.98 36 6.48 Yes 74 -2.81 No 0 0 No -27 0.51 No 43 61.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 28112926 - NM_001270940 XPO6 1 0.27 0.61 35 5.54 88.68 12 4.98 No 36 -2.46 No 0 0 No -21 0.6 No 49 76.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 28113007 - NM_001270940 XPO6 1 1.05 2.47 61 -2.29 69.12 25 7.55 Yes 12 1.9 Yes 0 0 No -24 0.95 Yes 46 93.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28123262 - NM_001270940 XPO6 1 0.05 0.14 8 -2.72 65.33 36 7.28 Yes 23 1.8 Yes 0 0 No -35 0.94 Yes 35 94.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28123264 - NM_001270940 XPO6 1 0.68 1.58 51 4.51 74.89 34 7.14 Yes 21 1.81 Yes 33 0.92 Yes -33 0.94 Yes 37 96.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 28138082 - NM_001270940 XPO6 1 0.14 0.32 16 8.57 93.78 20 5 No 47 1.14 Yes 24 0.33 Yes -26 0.58 No 46 55.6 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 28145252 - NM_001270940 XPO6 1 2.68 5.19 72 2.66 80.12 27 6.16 Yes 14 1.32 Yes 23 0.91 Yes -26 0.85 Yes 44 86.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 28153637 - NM_001270940 XPO6 1 0.15 0.36 23 4.49 89.33 21 5 No 55 1.28 Yes 0 0 No -23 0.92 Yes 47 78.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28164286 - NM_001270940 XPO6 1 0.25 0.42 22 10.62 87.36 26 5.55 No 13 0.36 No 25 0.77 Yes -25 0.73 Yes 45 79.68 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 28167297 - NM_001270940 XPO6 1 1.52 2.43 62 7.54 90.36 18 6.83 Yes 39 2.09 Yes 29 0.75 Yes -29 0.8 Yes 41 80.15 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 28169400 - NM_001270940 XPO6 1 0.05 0.17 11 11.08 85.2 49 5.64 Yes 36 0.85 Yes 0 0 No -28 0.88 Yes 42 92.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28178903 - NM_001270940 XPO6 1 0.61 1.21 52 6.16 94.12 25 5.1 No 67 0.4 No 0 0 No -24 0.84 Yes 46 79.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 28181647 - NM_001270940 XPO6 1 0.16 0.36 16 3.01 0 33 6.35 Yes 24 1.39 Yes 0 0 No -36 0.74 Yes 38 77.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28181651 - NM_001270940 XPO6 1 0.05 0.13 9 2.3 84.41 29 6.04 Yes 20 1.41 Yes 0 0 No -32 0.7 Yes 42 75.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28184426 - NM_001270940 XPO6 1 0.07 0.17 11 5.64 84.98 25 6.56 Yes 12 0.89 Yes 0 0 No -24 0.53 No 46 68.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 28188140 - NM_001270940 XPO6 1 0.07 0.15 9 5.23 67.5 44 5.78 Yes 31 1.02 Yes 0 0 No -46 0.82 Yes 24 87.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28188684 - NM_001270940 XPO6 1 0.21 0.53 24 5.47 76.25 20 6.08 Yes 7 0.67 No 34 0.68 Yes -19 0.75 Yes 51 69.1 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 28189092 - NM_001270940 XPO6 1 0.04 0.11 7 9.41 81.26 26 6.2 Yes 13 1.09 Yes 0 0 No -26 0.71 Yes 44 78.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28200575 - NM_001270940 XPO6 1 0.92 0.11 7 10.53 89.4 34 7.13 Yes 71 1.1 Yes 0 0 No -33 0.88 Yes 37 69.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28217695 - NM_001270940 XPO6 1 9.72 0.85 38 7.73 86.87 26 6.08 Yes 13 1.27 Yes 0 0 No -25 0.9 Yes 45 94.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 28217695 - NM_001270940 XPO6 1 15.59 1.36 49 7.73 86.87 26 6.08 Yes 13 1.27 Yes 0 0 No -25 0.9 Yes 45 94.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 21789428 + NM_015024 XPO7 1 0.21 0.18 11 7.8 83.55 28 5.28 No 34 0.14 No 0 0 No -27 0.7 Yes 43 56.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 21829391 + NM_015024 XPO7 1 0.18 0.24 12 1.01 0 40 7.3 Yes 27 0.49 No 0 0 No -37 0.64 No 33 64.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 21839271 + NM_015024 XPO7 1 0.14 0.24 12 -15.82 57.62 26 5.32 No 60 0.57 No 0 0 No -25 0.54 No 11 57.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 21839279 + NM_015024 XPO7 1 0.05 0.11 7 -0.51 0 17 4.12 No 68 0.56 No 0 0 No -33 0.44 No 54 50.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 21846233 + NM_015024 XPO7 1 0.34 0.57 32 8.82 84.68 14 5.57 Yes 1 0.19 No 0 0 No -28 0.61 No 46 51.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 21847858 + NM_015024 XPO7 1 0.15 0.22 12 0.85 0 26 7.46 Yes 13 1.88 Yes 0 0 No -25 0.78 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 21853000 + NM_015024 XPO7 1 0.09 0.14 7 -4.46 0 15 4.58 No 51 0.61 No 30 0.15 Yes -14 0.67 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 21852988 + NM_015024 XPO7 1 0.17 0.32 18 2.33 72.7 17 4.8 No 39 0.61 No 30 0.15 Yes -44 0.37 No 50 49.77 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 64805828 + NM_007235 XPOT 1 0.08 0.25 13 3.16 0 75 9.3 Yes 27 2.22 Yes 0 0 No -39 0.71 Yes 31 76.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 64812731 + NM_007235 XPOT 1 0.09 0.31 15 8.97 92.61 27 4.64 No 66 -3.41 No 0 0 No -27 0.36 No 43 52.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 64815612 + NM_007235 XPOT 1 0.13 0.38 18 3.25 83.57 28 6.01 Yes 15 0.51 No 0 0 No -27 0.92 Yes 43 95.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 64816102 + NM_007235 XPOT 1 0.16 0.44 20 4.91 82.39 25 5.1 No 12 1.1 Yes 0 0 No -24 0.75 Yes 46 86.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 64823247 + NM_007235 XPOT 1 0.13 0.26 14 3.01 0 29 5.92 Yes 67 1.13 Yes 0 0 No -33 0.49 No 43 63.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 64823831 + NM_007235 XPOT 1 0.38 1.08 41 -9.2 77.84 17 4.24 No 62 1.67 Yes 0 0 No -26 0.54 No 44 52.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 64827199 + NM_007235 XPOT 1 0.3 1.04 46 2.93 0 15 3.87 No 9 0.71 No 0 0 No -29 0.52 No 41 44.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 64827220 + NM_007235 XPOT 1 0.36 1.29 47 8.9 85.49 30 5.48 No 30 0.72 No 0 0 No -23 0.53 No 47 58.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 64828642 + NM_007235 XPOT 1 0.07 0.22 15 6.86 71.04 31 4.72 No 27 1.27 Yes 0 0 No -30 0.77 Yes 40 64.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 64829781 + NM_007235 XPOT 1 0.09 0.22 16 5.33 93.95 22 5.23 No 9 1 Yes 0 0 No -21 0.63 No 49 53.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 64840759 + NM_007235 XPOT 1 0.08 0.26 15 3.23 81.41 27 5.1 No 40 -2.24 No 0 0 No -26 0.59 No 44 91.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 180605209 + NM_001328662 XPR1 1 0.33 0.32 20 8.68 99.46 26 5.28 No 51 1.12 Yes 0 0 No -25 0.69 Yes 45 68.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 180654606 + NM_001328662 XPR1 1 0.42 0.36 19 8.85 88.97 32 7.08 Yes 19 1.13 Yes 0 0 No -31 0.87 Yes 39 85.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 180743214 + NM_001328662 XPR1 1 0.48 0.43 23 7.57 80.98 26 6.66 Yes 13 1.2 Yes 0 0 No -21 0.47 No 45 54.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 180772525 + NM_001328662 XPR1 1 0.17 0.13 8 -4.94 81.12 32 5.33 No 19 0.73 No 0 0 No -26 0.82 Yes 44 68.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 180772528 + NM_001328662 XPR1 1 0.15 0.1 7 -4.83 0 35 5.58 Yes 22 0.74 No 0 0 No -29 0.79 Yes 41 66.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 44050256 - NM_006297 XRCC1 1 0.58 0.5 23 -2.32 75.26 23 4.86 No 10 1.23 Yes 0 0 No -22 0.89 Yes 48 76.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44050871 - NM_006297 XRCC1 1 0.14 0.14 7 -0.53 0 12 4.24 No 20 1.91 Yes 0 0 No -32 0.92 Yes 38 76.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44050942 - NM_006297 XRCC1 1 0.15 0.13 8 11.91 92.71 50 5.34 No 32 -1.06 No 0 0 No -20 0.67 Yes 39 37.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 44051148 - NM_006297 XRCC1 1 0.39 0.17 10 -1.64 79.84 39 8.42 Yes 26 1.51 Yes 20 0.77 Yes -22 0.62 No 32 68.77 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 44057055 - NM_006297 XRCC1 1 0.8 0.54 29 1.15 0 9 3.87 No 15 0.95 Yes 0 0 No -27 0.84 Yes 43 75.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44057662 - NM_006297 XRCC1 1 2.83 2.14 62 -0.4 63.9 21 5.87 Yes 8 0.59 No 0 0 No -27 0.27 No 60 26.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 44057698 - NM_006297 XRCC1 1 0.31 0.22 15 3.75 73.82 48 8.17 Yes 35 0.5 No 23 0.49 Yes -43 0.61 No 23 71.17 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 44057701 - NM_006297 XRCC1 1 0.22 0.15 8 4.56 76.19 45 7.99 Yes 32 0.49 No 23 0.49 Yes -40 0.61 No 26 65.37 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 152349836 - NM_005431 XRCC2 1 1.9 0.81 36 9.32 87.16 18 5.47 No 25 0.78 Yes 0 0 No -31 0.39 No 53 47.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152354318 - NM_005431 XRCC2 1 6.15 2.75 63 11.39 88.27 25 7.42 Yes 12 0.15 No 0 0 No -24 0.73 Yes 51 57.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152366464 - NM_005431 XRCC2 1 0.84 0.31 17 8.07 91.45 24 4.74 No 38 0.36 No 0 0 No -23 0.54 No 47 60.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104165378 - NM_001100119 XRCC3 1 0.64 0.22 14 -7.94 0 9 3.54 No -4 0.59 No 31 0.81 Yes -8 0.67 Yes 62 35.13 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 104167044 - NM_001100119 XRCC3 1 2.14 0.85 39 4.8 83.55 24 5 No 6 -1.89 No 23 0.95 Yes -23 0.95 Yes 47 96.31 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 104168920 - NM_001100119 XRCC3 1 1.64 0.78 34 2.38 67.37 27 4.55 No -4 0.17 No 31 0.66 Yes -31 0.81 Yes 39 94.1 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 104172380 - NM_001100119 XRCC3 1 1.45 0.65 34 8.1 91.06 28 5.2 No 15 1.36 Yes 27 0.88 Yes -27 0.89 Yes 43 79.63 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 104172649 - NM_001100119 XRCC3 1 0.6 0.29 15 6.35 86.91 14 5.1 No 1 0.17 No 0 0 No -19 0.64 No 51 68.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104172713 - NM_001100119 XRCC3 1 2.12 0.92 38 2.03 71.81 55 6.84 Yes 54 0.62 No 27 0.6 Yes -41 0.35 No 29 57.89 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 104173545 - NM_001100119 XRCC3 1 0.13 0.13 7 2.39 0 11 4.12 No 16 1.88 Yes 0 0 No -28 0.9 Yes 42 92.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104177457 - NM_001100119 XRCC3 1 0.1 0.1 7 5.03 75.14 37 6.51 Yes 75 0.54 No 0 0 No -27 0.55 No 43 77.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104177518 - NM_001100119 XRCC3 1 1.78 1.72 55 7.63 80.56 50 8 Yes 14 0.57 No 26 0.77 Yes -26 0.73 Yes 44 73.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 104177577 - NM_001100119 XRCC3 1 0.92 0.83 39 -0.81 0 15 3.85 No 13 0.49 No 0 0 No -29 0.88 Yes 41 89.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104177999 - NM_001100119 XRCC3 1 3.09 1.4 56 11.91 85.59 26 5.48 No NA NA NA 25 0.85 Yes -23 0.78 Yes 50 71.18 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 104177999 - NM_001100119 XRCC3 1 5.32 2.36 61 11.91 85.59 26 5.48 No NA NA NA 25 0.85 Yes -23 0.78 Yes 50 71.18 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 82409820 + NM_001318013 XRCC4 1 0.15 0.13 8 8.26 85.31 27 6.87 Yes 14 0.34 No 0 0 No -26 0.81 Yes 44 88.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 82412990 + NM_001318013 XRCC4 1 0.22 0.19 10 10.09 84.08 18 6 Yes 5 1.45 Yes 0 0 No -23 0.78 Yes 47 92.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 82420639 + NM_001318013 XRCC4 1 0.15 0.13 7 11.2 82.03 30 7.24 Yes 17 1.15 Yes 0 0 No -25 0.54 No 45 57.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 82556578 + NM_001318013 XRCC4 1 8.15 0.42 21 11.9 87.57 32 6.84 Yes 52 0.67 No 0 0 No -31 0.71 Yes 39 88.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 82560357 + NM_001318013 XRCC4 1 1.82 0.13 8 1.27 61.21 58 6.61 Yes 45 0.91 Yes 0 0 No -41 0.45 No 29 55.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 82560376 + NM_001318013 XRCC4 1 6.51 0.39 20 4.37 82.78 24 3.69 No 64 0.91 Yes 0 0 No -24 0.44 No 46 38.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 82566887 + NM_001318013 XRCC4 1 4.16 0.21 14 9.04 93.3 33 7.57 Yes 20 0.47 No 0 0 No -32 0.79 Yes 38 85.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 82576362 + NM_001318013 XRCC4 1 2.28 0.18 9 7.58 80.29 14 4.79 No 1 0.44 No 0 0 No -21 0.84 Yes 49 75.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 216975189 + NM_021141 XRCC5 1 0.13 1 40 11.69 86.63 26 7.28 Yes 13 2.24 Yes 25 0.95 Yes -25 0.87 Yes 45 94.71 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 216977742 + NM_021141 XRCC5 1 0.07 0.47 27 1.68 0 60 7.56 Yes 34 0.69 No 0 0 No -31 0.73 Yes 39 72.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 216981360 + NM_021141 XRCC5 1 0.02 0.22 15 4.62 75.93 14 5.57 Yes 36 0.68 No 24 0.34 Yes -26 0.75 Yes 37 31.96 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 216982463 + NM_021141 XRCC5 1 0.02 0.24 15 5.65 71.26 21 6.07 Yes 8 0.91 Yes 20 0.49 Yes -20 0.67 Yes 50 77.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 216982474 + NM_021141 XRCC5 1 0.01 0.14 8 -14.22 0 9 3.87 No 19 0.89 Yes 0 0 No -16 0.32 No NA NA NA BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 216992267 + NM_021141 XRCC5 1 0.06 0.93 37 -0.7 0 12 4.24 No 34 2.06 Yes 0 0 No -46 0.88 Yes 24 95.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 217001814 + NM_021141 XRCC5 1 0.01 0.21 12 3.48 0 27 8.23 Yes 14 1.01 Yes 0 0 No -26 0.9 Yes 44 88.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 217005910 + NM_021141 XRCC5 1 0.02 0.26 16 -5.3 80.75 33 5.38 No 20 0.88 Yes 0 0 No -32 0.66 No 38 73.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 217005916 + NM_021141 XRCC5 1 0.01 0.14 8 -10.9 0 11 3.49 No 26 0.87 Yes 0 0 No -38 0.59 No 32 77.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 217006149 + NM_021141 XRCC5 1 0.01 0.21 14 8.65 88.92 25 5.09 No 12 0.61 No 0 0 No -24 0.85 Yes 46 80.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 217024766 + NM_021141 XRCC5 1 0.01 0.25 9 5.96 81.25 37 5.89 Yes 30 -1.2 No 26 0.86 Yes -28 0.67 Yes 42 66.99 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 217028394 + NM_021141 XRCC5 1 0.03 0.49 18 5.27 86.3 21 5.83 Yes 8 1.68 Yes 0 0 No -20 0.91 Yes 50 93.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 217057362 + NM_021141 XRCC5 1 0.07 0.97 42 -16.71 0 61 7.52 Yes 25 1.98 Yes 0 0 No -37 0.71 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 217069045 + NM_021141 XRCC5 1 0.03 0.58 30 -12.77 0 17 7.12 Yes 4 1.66 Yes 0 0 No -20 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 217069060 + NM_021141 XRCC5 1 0.01 0.11 7 3.22 72.48 21 5 No 19 1.61 Yes 0 0 No -20 0.7 Yes 39 61.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 217069890 + NM_021141 XRCC5 1 0.05 0.51 19 5.93 74.22 14 6.17 Yes 1 1.41 Yes 22 0.94 Yes -24 0.56 No 46 62.07 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 217069913 + NM_021141 XRCC5 1 0.01 0.11 8 -3.23 0 26 5.66 Yes 24 1.39 Yes 0 0 No -25 0.87 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 42024124 + NM_001288976 XRCC6 1 0.03 0.22 15 -5.19 73.82 33 5.73 Yes 55 -2.41 No 0 0 No -29 0.44 No 39 61.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 42032239 + NM_001288976 XRCC6 1 0.11 0.97 39 6.55 94.7 28 6.04 Yes 71 0.67 No 31 0.6 Yes -31 0.81 Yes 39 84.25 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 42046690 + NM_001288976 XRCC6 1 0.02 0.18 10 7.35 75.27 31 5.18 No 71 0.6 No 24 0.77 Yes -30 0.82 Yes 40 78.89 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 42054258 + NM_001288976 XRCC6 1 0.15 1.67 54 -2.42 69.67 22 5.07 No 48 1.12 Yes 0 0 No -30 0.63 No 40 51.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 142032017 - NM_001282857 XRN1 1 8.78 7.39 72 8.7 90.79 23 5.39 No 69 -2.15 No 22 0.58 Yes -22 0.83 Yes 48 71.9 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 142043854 - NM_001282857 XRN1 1 0.18 0.13 7 8.21 83.91 32 5.98 Yes 1 1.28 Yes 0 0 No -32 0.53 No 38 54.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 142048480 - NM_001282857 XRN1 1 0.64 0.63 31 -3.68 0 27 5.39 No 73 0.27 No 22 0.46 Yes -26 0.73 Yes 60 37.57 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 142051095 - NM_001282857 XRN1 1 0.13 0.13 8 7.35 86.79 20 4.56 No 7 0.79 Yes 0 0 No -25 0.5 No 45 51.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 142051267 - NM_001282857 XRN1 1 3.75 2.67 64 9.5 88.49 26 6.35 Yes 13 1.35 Yes 25 0.95 Yes -25 0.91 Yes 45 94.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 142051374 - NM_001282857 XRN1 1 17.17 11.78 72 -3.31 68.94 54 7.88 Yes 21 1.65 Yes 30 0.9 Yes -33 0.49 No 17 60.42 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 142051794 - NM_001282857 XRN1 1 0.97 0.65 32 8.42 87.56 26 5.8 Yes 22 0.28 No 0 0 No -25 0.77 Yes 45 79.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142052200 - NM_001282857 XRN1 1 0.17 0.15 11 7.09 83.25 14 4.21 No 1 0.79 Yes 0 0 No -30 0.51 No 40 63.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 142062294 - NM_001282857 XRN1 1 0.21 0.22 14 8.11 85.05 41 6.19 Yes 28 1.3 Yes 0 0 No -34 0.83 Yes 36 88.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 142063791 - NM_001282857 XRN1 1 0.34 0.28 15 13.86 99.45 26 5.66 Yes 13 0.76 No 0 0 No -25 0.91 Yes 45 92.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 142078803 - NM_001282857 XRN1 1 0.19 0.19 10 7.93 72.73 33 7.09 Yes 12 0.72 No 31 0.67 Yes -32 0.83 Yes 38 92.47 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 142079541 - NM_001282857 XRN1 1 0.34 0.35 17 7.67 85.86 28 7.68 Yes 15 1.54 Yes 0 0 No -27 0.95 Yes 43 95.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 142088882 - NM_001282857 XRN1 1 0.34 0.28 18 3.28 0 38 8.72 Yes 25 1.94 Yes 0 0 No -37 0.84 Yes 33 87.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 142094735 - NM_001282857 XRN1 1 0.19 0.14 10 -1.21 60.29 36 6.36 Yes 42 -3.3 No 0 0 No -31 0.61 No 39 60.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 142095638 - NM_001282857 XRN1 1 2.45 2.21 59 4.46 85.52 58 8.29 Yes 75 0.29 No 0 0 No -29 0.48 No 13 49.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 142107049 - NM_001282857 XRN1 1 0.21 0.21 10 2.56 75.49 33 5.99 Yes 20 0.87 Yes 0 0 No -32 0.59 No 38 85.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 142123916 - NM_001282857 XRN1 1 0.23 0.26 16 -1.73 71.16 31 7.85 Yes 18 1.94 Yes 0 0 No -31 0.67 Yes 39 45.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 142136451 - NM_001282857 XRN1 1 0.13 0.13 7 8.52 89.87 24 6.4 Yes 11 1.29 Yes 0 0 No -23 0.59 No 47 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 142137017 - NM_001282857 XRN1 1 0.28 0.18 9 6.98 88.43 26 6.03 Yes 13 0.35 No 0 0 No -31 0.5 No 45 53.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 142154899 - NM_001282857 XRN1 1 0.36 0.29 13 6.4 88.76 38 7.99 Yes 69 1.12 Yes 29 0.54 Yes -29 0.66 No 41 67.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 21307426 + NM_001317960 XRN2 1 0.03 0.11 8 6.67 84.61 49 7.01 Yes 51 1.2 Yes 0 0 No -48 0.93 Yes 22 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 21309220 + NM_001317960 XRN2 1 0.06 0.21 10 -0.67 58.94 12 5.12 No 54 0.06 No 0 0 No -57 0.49 No 22 26.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 21314322 + NM_001317960 XRN2 1 0.07 0.25 16 -2.9 0 17 4.58 No 68 0.85 Yes 26 0.85 Yes -32 0.74 Yes 38 51.82 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 21319657 + NM_001317960 XRN2 1 0.49 1.49 50 5.32 81.45 26 6.24 Yes 13 1.72 Yes 28 0.83 Yes -25 0.63 No 45 59.9 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 21319686 + NM_001317960 XRN2 1 0.04 0.11 8 0.26 0 34 6.14 Yes 42 1.72 Yes 0 0 No -33 0.9 Yes 37 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 21325491 + NM_001317960 XRN2 1 0.25 0.64 32 4.64 71.77 27 6.13 Yes 61 1.22 Yes 0 0 No -26 0.77 Yes 44 77.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 21326471 + NM_001317960 XRN2 1 0.11 0.28 16 4.59 76.42 29 6.29 Yes NA NA NA 0 0 No -26 0.7 Yes 44 71.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 21335651 + NM_001317960 XRN2 1 0.06 0.11 8 8.06 94.73 21 6.02 Yes 8 0.9 Yes 0 0 No -24 0.64 No 46 71.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 21337160 + NM_001317960 XRN2 1 0.08 0.17 9 -1.7 64.03 102 8.25 Yes 49 0.19 No 0 0 No -28 0.66 No 12 30.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 21337205 + NM_001317960 XRN2 1 0.15 0.33 21 -0.25 0 36 6 Yes 23 0.5 No 23 0.64 Yes -35 0.63 No 35 61.41 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 21338378 + NM_001317960 XRN2 1 0.04 0.13 7 1.58 0 40 6.32 Yes 75 0.86 Yes 0 0 No -37 0.66 No 31 74.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 21340552 + NM_001317960 XRN2 1 0.05 0.13 8 2.77 65.25 44 7.84 Yes 61 1.28 Yes 0 0 No -43 0.73 Yes 27 82.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 21346211 + NM_001317960 XRN2 1 0.03 0.1 7 -17.56 0 26 5.57 Yes 13 0.93 Yes 0 0 No -25 0.6 No NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 21346214 + NM_001317960 XRN2 1 0.13 0.38 15 -4.79 0 29 5.82 Yes 16 0.94 Yes 0 0 No -28 0.6 No 42 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 21347274 + NM_001317960 XRN2 1 0.11 0.26 14 5.85 70.43 43 6.64 Yes 30 0.85 Yes 0 0 No -32 0.87 Yes 38 91.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 21367945 + NM_001317960 XRN2 1 0.12 0.28 17 9.78 88.16 28 6.13 Yes 15 0.36 No 0 0 No -27 0.71 Yes 43 87.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 21368069 + NM_001317960 XRN2 1 0.13 0.32 18 6.44 80.9 24 5.37 No 45 0.67 No 0 0 No -23 0.71 Yes 47 73.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 74617667 - NM_001270381 XRRA1 1 1.45 0.33 17 6.72 78.33 23 4.79 No 18 0.29 No 0 0 No -22 0.75 Yes 48 82.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 74644954 - NM_001270381 XRRA1 1 0.64 0.22 14 3.18 77.75 23 3.77 No 73 -5.18 No 29 0.74 Yes -22 0.81 Yes 48 86.85 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 194901245 - NM_001308069 XXYLT1 1 20.19 3.67 66 8.43 85.48 32 6.77 Yes 19 2.69 Yes 31 0.94 Yes -31 0.44 No 39 80.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr3 194928228 - NM_001308069 XXYLT1 1 1.37 0.21 12 7.39 85.14 25 5.19 No 51 -2.32 No 24 0.92 Yes -24 0.87 Yes 46 83.84 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 48434478 + NM_022167 XYLT2 1 0.8 0.15 10 3.71 79.77 15 6.56 Yes 51 -1.49 No 29 0.64 Yes -29 0.7 Yes 41 54.18 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 33245123 - NM_003680 YARS 1 0.04 0.17 11 0.24 75.66 31 6.56 Yes 18 1.82 Yes 0 0 No -30 0.95 Yes 40 93.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33245985 - NM_003680 YARS 1 0.02 0.13 8 2.34 80 22 4.69 No 9 -2.1 No 0 0 No -21 0.85 Yes 49 81.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 33263240 - NM_003680 YARS 1 0.92 4.82 71 11.37 91.39 22 5.81 Yes 9 0.6 No 27 0.65 Yes -27 0.74 Yes 43 65.73 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 33270485 - NM_003680 YARS 1 0.04 0.1 7 3.82 80.01 32 5.7 Yes 14 0.2 No 0 0 No -26 0.93 Yes 44 79.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 33270535 - NM_003680 YARS 1 0.11 0.31 18 1.5 80.92 24 5.06 No 74 1.59 Yes 0 0 No -23 0.92 Yes 47 94.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33275933 - NM_003680 YARS 1 0.02 0.11 7 6.89 87.58 24 4.66 No 47 0.79 Yes 0 0 No -27 0.54 No 43 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 32903774 - NM_001040436 YARS2 1 0.12 0.17 10 9.18 84.86 29 5.32 No 46 1.69 Yes 28 0.82 Yes -28 0.52 No 42 64.12 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 32906084 - NM_001040436 YARS2 1 0.41 0.46 27 7.18 85.23 21 5.66 Yes 8 1.18 Yes 0 0 No -20 0.86 Yes 50 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr21 47714650 + NM_058181 YBEY 1 0.28 0.13 8 8.48 93.13 22 6.24 Yes 55 2.1 Yes 0 0 No -21 0.96 Yes 49 94.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 43162600 + NR_132737 YBX1 1 0.01 0.47 25 7.3 86.7 29 3.94 No 44 -1.78 No 0 0 No -23 0.7 Yes 47 70.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 43162825 + NR_132737 YBX1 1 0.01 0.19 11 1.97 73.11 81 9.06 Yes -3 1.35 Yes 21 0.82 Yes -39 0.91 Yes 31 87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 43166431 + NR_132737 YBX1 1 0.01 0.28 12 2.99 77.25 13 5.1 No 52 -3.56 No 23 0.81 Yes -27 0.51 No 43 62.18 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 43167656 + NR_132737 YBX1 1 0.1 5 71 2.66 0 31 7.07 Yes 18 0.47 No 0 0 No -33 0.73 Yes 37 77.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 10852275 - NM_003651 YBX3 1 0.07 0.47 25 4.93 71.96 53 7.55 Yes 14 1.02 Yes 26 0.81 Yes -26 0.78 Yes 44 90.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 10852867 - NM_003651 YBX3 1 0.07 0.43 26 6.54 85.09 24 4.7 No 11 0.06 No 0 0 No -24 0.93 Yes 46 92.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 10852888 - NM_003651 YBX3 1 0.06 0.42 25 4.88 84.92 24 3.59 No 68 0.19 No 0 0 No -23 0.45 No 52 63.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 10854731 - NM_003651 YBX3 1 1.77 10.97 72 6.02 84.18 27 7.68 Yes 59 0.32 No 0 0 No -26 0.68 Yes 44 88.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 10855112 - NM_003651 YBX3 1 0.08 0.53 27 3.8 83.86 26 5.19 No 21 1.33 Yes 19 0.89 Yes -33 0.72 Yes 37 92.05 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 10856219 - NM_003651 YBX3 1 0.06 0.39 22 8.37 85.96 23 5.62 Yes 10 1.05 Yes 22 0.85 Yes -22 0.43 No 48 40.82 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 10863388 - NM_003651 YBX3 1 0.95 3.44 65 9.58 91.52 32 5.74 Yes 51 0.69 No 20 0.34 Yes -31 0.68 Yes 39 42.19 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 10870377 - NM_003651 YBX3 1 0.08 0.5 28 8.96 83.33 21 4.4 No 44 1.06 Yes 21 0.36 Yes -21 0.5 No 49 24.91 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 10870720 - NM_003651 YBX3 1 0.04 0.26 15 -13.77 0 28 5.25 No 9 0.67 No 26 0.86 Yes -27 0.83 Yes NA NA NA BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 183427956 + NM_018023 YEATS2 1 0.8 0.18 11 7.37 86.13 18 4.89 No 41 0.83 Yes 0 0 No -22 0.65 No 48 86.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 183433792 + NM_018023 YEATS2 1 0.42 0.25 16 8.1 88.21 27 5.2 No 47 2.35 Yes 0 0 No -59 0.44 No 11 79.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 183434134 + NM_018023 YEATS2 1 2.06 1.15 47 4.01 83.33 14 3.52 No 30 1.22 Yes 0 0 No -23 0.57 No 47 42.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 183444634 + NM_018023 YEATS2 1 0.17 0.13 9 6.28 90.92 16 5.13 No 3 0.02 No 0 0 No -28 0.41 No 45 52.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 183456938 + NM_018023 YEATS2 1 0.91 0.43 23 9.08 81.64 33 4.64 No 64 1.67 Yes 0 0 No -32 0.93 Yes 38 97.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 183461154 + NM_018023 YEATS2 1 0.38 0.19 11 2.51 0 30 9.91 Yes 70 1.43 Yes 0 0 No -34 0.34 No 41 36.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 183469972 + NM_018023 YEATS2 1 0.63 0.26 15 7.57 83.4 34 5.46 No 21 2.07 Yes 0 0 No -33 0.79 Yes 37 85.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 183471910 + NM_018023 YEATS2 1 39.44 24.26 72 6.49 79.35 29 5.06 No 16 1.22 Yes 34 0.72 Yes -31 0.77 Yes 42 67.36 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 183476855 + NM_018023 YEATS2 1 0.26 0.18 10 4.84 78.11 33 5.72 Yes 68 0.77 No 0 0 No -32 0.57 No 17 54.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 183479297 + NM_018023 YEATS2 1 0.76 0.53 26 0.66 72.62 65 4.47 No 35 0.72 No 0 0 No -28 0.52 No 37 80.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 183479899 + NM_018023 YEATS2 1 0.18 0.11 7 1.34 77.08 13 4.88 No 72 -1.99 No 0 0 No -42 0.71 Yes 32 81.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 183490132 + NM_018023 YEATS2 1 0.32 0.13 7 6.37 84.76 27 4.77 No 33 -1.16 No 0 0 No -26 0.8 Yes 44 83.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 183503916 + NM_018023 YEATS2 1 0.25 0.19 12 1.27 0 33 6.85 Yes 20 0.11 No 0 0 No -35 0.64 No 35 66.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 183510903 + NM_018023 YEATS2 1 7.32 3.56 66 9.3 91.96 24 5.2 No 11 0.3 No 23 0.78 Yes -23 0.73 Yes 47 73.92 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 69755096 + NM_006530 YEATS4 1 1.86 1.44 49 5.72 90.92 28 5.29 No 64 0.94 Yes 27 0.82 Yes -27 0.78 Yes 43 68.75 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 69757956 + NM_006530 YEATS4 1 0.98 0.9 37 -0.69 60.87 39 4.33 No 32 0.66 No 25 0.5 Yes -20 0.45 No 32 52.87 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 69772327 + NM_006530 YEATS4 1 0.12 0.13 8 11.69 91.79 40 8.46 Yes 27 0.94 Yes 0 0 No -39 0.68 Yes 31 76.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 69783932 + NM_006530 YEATS4 1 0.27 0.46 23 3.94 0 9 3.87 No 14 0.42 No 0 0 No -26 0.48 No 40 71.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr18 729408 - NM_005433 YES1 1 0.23 0.13 9 6.09 85.53 30 4.57 No 68 -2.45 No 0 0 No -29 0.86 Yes 41 78.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 736525 - NM_005433 YES1 1 0.27 0.11 7 7.98 82.35 31 7.66 Yes 1 0.42 No 0 0 No -25 0.42 No 45 38.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 751647 - NM_005433 YES1 1 0.99 0.63 33 6.66 87.75 24 5.29 No 11 1.28 Yes 0 0 No -23 0.92 Yes 47 96.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 775114 - NM_005433 YES1 1 0.46 0.17 11 10.47 93.61 18 4.64 No 33 0.73 No 26 0.73 Yes -26 0.7 Yes 44 60.42 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 66052870 - NM_020470 YIF1A 1 0.12 0.15 10 5.63 78.95 32 5.69 Yes 19 1.36 Yes 0 0 No -26 0.69 Yes 39 66.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 66053044 - NM_020470 YIF1A 1 3.18 4.31 69 8.74 82.01 14 5.75 Yes 30 2.03 Yes 27 0.59 Yes -27 0.44 No 43 67.25 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 66054486 - NM_020470 YIF1A 1 0.23 0.42 23 4.25 83.93 60 7.85 Yes 55 0.98 Yes 30 0.43 Yes -23 0.52 No 40 66.05 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 66054592 - NM_020470 YIF1A 1 0.59 1.04 43 4.59 81.01 33 7.05 Yes 20 1.83 Yes 0 0 No -26 0.65 No 44 63.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 66055691 - NM_020470 YIF1A 1 0.08 0.11 7 1.79 76 23 4.9 No 10 -0.32 No 0 0 No -22 0.87 Yes 48 78.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 38797631 - NM_001039671 YIF1B 1 8.73 6.93 72 8.37 84.57 22 6.93 Yes 9 0.4 No 21 0.64 Yes -21 0.49 No 49 56.04 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 54325332 - NR_036639 YIPF1 1 0.98 0.24 13 2.88 0 62 9.04 Yes 14 1.09 Yes 0 0 No -26 0.95 Yes 44 92.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 54348705 - NR_036639 YIPF1 1 2.56 1.83 53 8.22 81 42 6.15 Yes 7 0.96 Yes 23 0.89 Yes -23 0.63 No 47 82.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 54348935 - NR_036639 YIPF1 1 4.54 2.92 67 0.35 75.39 23 4.9 No 71 -6.51 No 0 0 No -22 0.8 Yes 48 43.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 11033868 - NM_024029 YIPF2 1 8.49 6.43 72 1.39 69.59 29 4.2 No 43 0.39 No 23 0.63 Yes -29 0.36 No 41 34.4 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 11034069 - NM_024029 YIPF2 1 0.46 0.26 16 4.74 87.85 19 4.9 No 23 0.89 Yes 0 0 No -35 0.52 No 53 66.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 11035741 - NM_024029 YIPF2 1 0.48 0.26 14 6.56 84.04 20 7.14 Yes 7 1.19 Yes 0 0 No -19 0.74 Yes 51 86.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11038446 - NM_024029 YIPF2 1 0.88 0.42 26 12.15 84.62 27 5.74 Yes 14 1.1 Yes 26 0.74 Yes -26 0.83 Yes 44 79.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 11038597 - NM_024029 YIPF2 1 0.43 0.32 20 4.33 70.78 22 6.08 Yes 9 1.59 Yes 0 0 No -21 0.81 Yes 49 84.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43480298 - NM_015388 YIPF3 1 0.93 1.81 58 -3.11 0 27 5.74 Yes 14 0.19 No 0 0 No -26 0.86 Yes 44 87.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43480298 - NM_015388 YIPF3 1 0.1 0.19 11 -3.11 0 27 5.74 Yes 14 0.19 No 0 0 No -26 0.86 Yes 44 87.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 43480837 - NM_015388 YIPF3 1 2.25 3.33 68 3 71.78 41 6.95 Yes 28 1.39 Yes 40 0.77 Yes -40 0.75 Yes 30 92.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 43481180 - NM_015388 YIPF3 1 0.29 0.39 22 -1.22 0 15 4.36 No 15 -1.71 No 0 0 No -14 0.76 Yes 56 63.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 43483785 - NM_015388 YIPF3 1 0.34 0.35 17 -0.57 72.93 28 5.29 No 41 -3.11 No 27 0.87 Yes -27 0.92 Yes 43 59.22 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 43483926 - NM_015388 YIPF3 1 1.73 1.75 54 0.69 78.52 24 4.9 No 41 -4.02 No 20 0.82 Yes -23 0.9 Yes 47 90.17 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 43483929 - NM_015388 YIPF3 1 1.04 1 42 -0.57 0 21 4.58 No 38 -3.83 No 20 0.82 Yes -20 0.89 Yes 50 90.75 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 32528120 + NM_032312 YIPF4 1 0.08 0.13 8 7.4 76.28 55 8.02 Yes 33 1.28 Yes 0 0 No -27 0.54 No 42 71.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 143541848 - NM_030799 YIPF5 1 0.12 0.13 9 0.96 59.71 30 5.83 Yes 17 0.52 No 0 0 No -29 0.82 Yes 41 80.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 67725998 + NM_173834 YIPF6 1 0.35 0.14 10 12.05 92.89 27 5.61 Yes 56 0.66 No 0 0 No -33 0.68 Yes 37 77.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 67727979 + NM_173834 YIPF6 1 0.7 0.29 18 3.01 0 31 6.07 Yes 18 1.34 Yes 0 0 No -30 0.94 Yes 40 96.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 67730520 + NM_173834 YIPF6 1 1.05 0.36 19 6.13 93.18 26 5.28 No 13 0.94 Yes 25 0.79 Yes -26 0.81 Yes 44 63.3 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chrX 67743216 + NM_173834 YIPF6 1 0.21 0.18 10 -3.49 64.44 22 4.9 No 9 0.64 No 0 0 No -21 0.9 Yes 49 94.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44244173 + NM_006555 YKT6 1 0.68 1.49 52 2.67 0 10 4 No 60 0.31 No 0 0 No -29 0.45 No 47 45.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44248005 + NM_006555 YKT6 1 0.29 0.83 35 5.78 83.43 21 7.55 Yes 8 0.79 Yes 20 0.79 Yes -20 0.85 Yes 50 88.76 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 44248393 + NM_006555 YKT6 1 0.19 0.54 31 7.49 95.21 23 5.1 No 61 1.74 Yes 0 0 No -22 0.63 No 51 68.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 44249688 + NM_006555 YKT6 1 0.1 0.31 20 7.42 92.6 29 7.76 Yes 16 0.38 No 0 0 No -28 0.84 Yes 42 89.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44250440 + NM_006555 YKT6 1 0.07 0.19 11 3.78 68.37 17 5.48 No 20 -2.9 No 23 0.29 Yes -16 0.57 No 54 65.73 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 44250464 + NM_006555 YKT6 1 0.1 0.31 20 3.46 70.8 30 5.74 Yes 17 0.32 No 0 0 No -29 0.92 Yes 41 92.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44251152 + NM_006555 YKT6 1 3.24 10.38 72 7.94 88.32 16 4.06 No 11 0.5 No 24 0.92 Yes -24 0.85 Yes 46 90.09 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 44251823 + NM_006555 YKT6 1 0.06 0.22 9 5.11 83.02 16 4.69 No 11 1.2 Yes 24 0.94 Yes -23 0.73 Yes 47 91.42 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 75238394 + NM_019589 YLPM1 1 1.2 1.51 51 4.66 83.15 29 5.39 No 16 1.09 Yes 0 0 No -28 0.93 Yes 42 92.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75246365 + NM_019589 YLPM1 1 0.1 0.11 8 11.06 95.65 35 5.17 No 11 1.13 Yes 0 0 No -30 0.68 Yes 40 71.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75251404 + NM_019589 YLPM1 1 0.47 0.19 12 8.34 79.53 36 5.86 Yes 9 1.07 Yes 0 0 No -29 0.73 Yes 41 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75277008 + NM_019589 YLPM1 1 0.13 0.15 11 -0.95 75.34 19 4.67 No 24 0.55 No 0 0 No -24 0.92 Yes 46 45.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75294074 + NM_019589 YLPM1 1 1.93 2.04 60 8.48 87.28 59 7.61 Yes 23 1.58 Yes 30 0.68 Yes -30 0.87 Yes 40 79.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 27403764 - NM_001253866 YME1L1 1 0.03 0.14 8 8.78 90.28 31 5.83 Yes 18 -1.88 No 0 0 No -30 0.5 No 42 37.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 27403792 - NM_001253866 YME1L1 1 0.05 0.24 13 6.8 87.44 22 3.19 No 71 0.05 No 0 0 No -21 0.53 No 49 60.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 27408403 - NM_001253866 YME1L1 1 0.02 0.14 8 -1.42 0 12 4.24 No 8 0.22 No 29 0.93 Yes -34 0.48 No 36 68.13 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 27410376 - NM_001253866 YME1L1 1 0.03 0.17 12 -30.37 0 30 5.83 Yes 17 0.22 No 0 0 No -30 0.5 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 27411855 - NM_001253866 YME1L1 1 0.07 0.22 13 2.56 63.7 41 5.39 No 76 1.45 Yes 0 0 No -33 0.41 No 37 43.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 27412617 - NM_001253866 YME1L1 1 0.02 0.1 7 1.63 0 15 4.58 No 28 0.75 No 0 0 No -36 0.86 Yes 34 91.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 27415337 - NM_001253866 YME1L1 1 0.22 0.9 38 6.93 0 21 4.57 No 38 1.1 Yes 0 0 No -20 0.58 No 50 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 27415349 - NM_001253866 YME1L1 1 0.1 0.39 23 5.09 79.68 20 5.63 Yes 26 1.09 Yes 0 0 No -19 0.67 Yes 51 87.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27431406 - NM_001253866 YME1L1 1 2.71 0.29 18 -1.82 0 12 4.24 No 28 -1.09 No 0 0 No -31 0.77 Yes 39 89.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 27431415 - NM_001253866 YME1L1 1 3766.66 374.35 72 10.51 92.92 23 6.1 Yes 75 0.73 No 22 0.67 Yes -22 0.82 Yes 48 91.17 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 27431415 - NM_001253866 YME1L1 1 4.47 0.51 28 10.51 92.92 23 6.1 Yes 75 0.73 No 22 0.67 Yes -22 0.82 Yes 48 91.17 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 27436598 - NM_001253866 YME1L1 1 3.97 11.07 72 7.73 87.16 20 5.56 Yes 50 -2.78 No 30 0.36 Yes -30 0.74 Yes 40 69.23 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr10 27437963 - NM_001253866 YME1L1 1 0.04 0.17 9 0.98 0 10 4 No 13 1.14 Yes 0 0 No -33 0.71 Yes 37 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 27442211 - NM_001253866 YME1L1 1 0.46 2.11 58 7.28 78.9 31 5.43 No 34 1.49 Yes 24 0.77 Yes -30 0.66 No 40 90.04 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 207223095 - NM_001276320 YOD1 1 1.13 0.42 19 10.4 92.75 13 6.4 Yes 74 1.5 Yes 28 0.63 Yes -29 0.45 No 41 75.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 30104115 - NM_001145524 YPEL3 1 1.1 0.85 41 2.11 0 9 3.87 No 69 1.46 Yes 0 0 No -28 0.92 Yes 42 87.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30105432 - NM_001145524 YPEL3 1 0.31 0.18 10 -1.64 0 14 4.08 No 52 1.44 Yes 0 0 No -58 0.6 No 51 51.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 30105473 - NM_001145524 YPEL3 1 0.35 0.15 11 8.39 85.51 24 5.14 No 11 1.5 Yes 0 0 No -23 0.5 No 47 66.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 30105797 - NM_001145524 YPEL3 1 0.64 0.46 23 7.11 81.65 74 8.22 Yes 8 -1.68 No 23 0.44 Yes -23 0.53 No 47 76.46 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 30106657 - NM_001145524 YPEL3 1 11.94 1.83 55 -3.61 0 19 3.3 No 7 -1.73 No 19 0.66 Yes -19 0.36 No 51 22.72 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 30381488 + NM_001127401 YPEL5 1 0.14 0.15 11 -0.39 0 44 10.03 Yes 66 1.17 Yes 0 0 No -43 0.64 No 27 92.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 112863530 + NM_022828 YTHDC2 1 0.41 0.29 15 5.53 86.43 27 5.12 No 35 0.27 No 0 0 No -26 0.8 Yes 20 66.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 112871065 + NM_022828 YTHDC2 1 0.38 0.24 15 9.06 98.16 30 6.02 Yes 76 -3.48 No 0 0 No -23 0.76 Yes 47 74.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 112889292 + NM_022828 YTHDC2 1 0.83 0.5 24 -1.75 0 9 3.74 No 47 0.88 Yes 0 0 No -26 0.8 Yes 44 64.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 112889622 + NM_022828 YTHDC2 1 0.68 0.5 23 4.1 74.28 38 5.26 No 33 1.1 Yes 25 0.8 Yes -37 0.58 No 33 65.77 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr5 112895014 + NM_022828 YTHDC2 1 1.67 0.67 31 6.05 76.57 58 5.46 No 13 -2.29 No 0 0 No -30 0.56 No 40 75.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 112896781 + NM_022828 YTHDC2 1 0.64 0.26 18 1.18 0 27 6.32 Yes 14 1.55 Yes 0 0 No -26 0.79 Yes 44 90.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 112899669 + NM_022828 YTHDC2 1 0.28 0.22 10 7.78 78.62 30 7.28 Yes 17 0.26 No 0 0 No -28 0.41 No 40 44.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 112901655 + NM_022828 YTHDC2 1 1.24 0.74 35 7.03 96.24 21 4.9 No 69 0.14 No 0 0 No -20 0.82 Yes 50 71.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 112915519 + NM_022828 YTHDC2 1 1.68 0.97 35 6.32 83.61 14 5.29 No 1 0.83 Yes 0 0 No -26 0.65 No 47 78.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 112920024 + NM_022828 YTHDC2 1 0.49 0.29 17 4.72 84.62 20 5.71 Yes 41 1.57 Yes 0 0 No -19 0.55 No 51 82.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 112929507 + NM_022828 YTHDC2 1 0.17 0.11 8 5.42 86.97 35 3.98 No 2 0.93 Yes 0 0 No -21 0.81 Yes 49 59.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 61835158 - NM_017798 YTHDF1 1 0.07 0.13 7 -9.63 74.03 26 6.26 Yes 13 0.81 Yes 0 0 No -25 0.71 Yes 45 84.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 61846988 - NM_017798 YTHDF1 1 1.16 0.46 24 -0.18 0 30 7.16 Yes 17 1.44 Yes 29 0.59 Yes -29 0.72 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 29066814 + NM_001172828 YTHDF2 1 0.3 0.92 40 6.04 75.19 16 6.19 Yes 3 0.54 No 27 0.55 Yes -23 0.41 No 47 70.73 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr8 64083301 + NM_001277818 YTHDF3 1 0.25 0.47 24 5.9 84.4 17 4.95 No 4 0.13 No 0 0 No -22 0.69 Yes 48 75.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 64085211 + NM_001277818 YTHDF3 1 4.76 8.43 72 8.27 85.79 41 6.32 Yes 42 0.73 No 24 0.62 Yes -24 0.91 Yes 46 79.31 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 64086209 + NM_001277818 YTHDF3 1 0.33 0.57 28 8.56 79.61 31 5.47 No 1 1.14 Yes 30 0.64 Yes -30 0.48 No 40 62.94 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 64087895 + NM_001277818 YTHDF3 1 0.64 1.17 50 0.46 0 9 3.87 No 12 1.19 Yes 28 0.72 Yes -24 0.92 Yes 46 91.83 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 64095222 + NM_001277818 YTHDF3 1 0.07 0.15 9 7.85 78.11 47 7.56 Yes 56 1.11 Yes 0 0 No -46 0.77 Yes 24 81.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43515514 + NM_003404 YWHAB 1 0.26 0.15 10 2.24 82.04 22 8.31 Yes 59 0.6 No 26 0.79 Yes -21 0.73 Yes 49 60.45 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 43515519 + NM_003404 YWHAB 1 1.59 0.92 40 -0.7 0 27 8.57 Yes 64 0.59 No 26 0.79 Yes -26 0.64 No 44 62.95 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 43516185 + NM_003404 YWHAB 1 2.26 1.47 44 5.87 84.9 42 7.3 Yes 29 1.23 Yes 27 0.77 Yes -28 0.59 No 43 65.9 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 43516292 + NM_003404 YWHAB 1 6.14 3.58 69 1.82 0 34 4.58 No 7 0.94 Yes 0 0 No -33 0.61 No 37 57.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 43528707 + NM_003404 YWHAB 1 0.1 0.1 7 10.5 87.82 19 4.27 No 23 0.68 No 0 0 No -24 0.61 No 46 79.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 43531145 + NM_003404 YWHAB 1 0.03 0.31 18 11.46 99.29 30 6 Yes 17 0.74 No 0 0 No -29 0.71 Yes 41 70.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 43531538 + NM_003404 YWHAB 1 0.03 0.26 17 4.55 74.16 66 5.84 Yes 49 0.87 Yes 0 0 No -26 0.88 Yes 44 85.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 43531676 + NM_003404 YWHAB 1 0.04 0.39 25 4.93 77.28 17 5.57 Yes 4 1 Yes 28 0.33 Yes -16 0.77 Yes 54 84.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 43532636 + NM_003404 YWHAB 1 0.16 1.51 57 -10.47 77.59 22 6.06 Yes 9 0.57 No 0 0 No -21 0.33 No 41 47.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 43534627 + NM_003404 YWHAB 1 0.02 0.17 11 3.6 84.12 16 5.66 Yes 3 0.29 No 18 0.64 Yes -27 0.58 No 43 43.76 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 1259159 - NM_006761 YWHAE 1 0.02 0.44 23 10.44 84.47 21 6.78 Yes 8 1.27 Yes 0 0 No -20 0.69 Yes 50 83.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1264599 - NM_006761 YWHAE 1 0.01 0.15 10 -0.84 0 32 6.48 Yes 19 0.6 No 37 0.57 Yes -31 0.45 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 1273036 - NM_006761 YWHAE 1 2.62 36.86 72 8.17 92.78 32 9.28 Yes 19 1.01 Yes 22 0.68 Yes -22 0.72 Yes 48 51.26 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 1282237 - NM_006761 YWHAE 1 0.02 0.35 15 3.01 0 29 8.15 Yes 37 1.27 Yes 0 0 No -28 0.7 Yes 42 80.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 1302311 - NM_006761 YWHAE 1 0.17 2.35 58 6.17 85.77 25 5.92 Yes 12 1.38 Yes 24 0.86 Yes -28 0.62 No 45 65.64 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 1302561 - NM_006761 YWHAE 1 0.01 0.21 13 9.11 84.48 20 6.08 Yes 7 1.74 Yes 19 0.84 Yes -19 0.91 Yes 51 90.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 75976876 - NM_012479 YWHAG 1 0.07 0.25 12 10.74 93.31 28 6.77 Yes 15 2.2 Yes 0 0 No -27 0.49 No 43 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 75980152 - NM_012479 YWHAG 1 0.1 0.39 21 3.24 0 38 6.77 Yes 25 1.14 Yes 0 0 No -38 0.38 No 32 77.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 32341148 + NM_003405 YWHAH 1 0.15 0.25 14 3.29 77.41 22 4.9 No 53 -3.5 No 0 0 No -17 0.7 Yes 53 51.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 32341485 + NM_003405 YWHAH 1 0.72 1.53 35 3.91 70.81 21 4.67 No -4 0.09 No 20 0.41 Yes -20 0.71 Yes 50 56.12 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 32341542 + NM_003405 YWHAH 1 0.55 1.1 33 5.24 76.44 18 4.11 No 42 0 No 25 0.87 Yes -25 0.82 Yes 45 64.37 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 32343450 + NM_003405 YWHAH 1 0.09 0.22 14 6.37 82.48 86 10.05 Yes 73 1.97 Yes 0 0 No -23 0.5 No 47 47.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 32346294 + NM_003405 YWHAH 1 0.04 0.13 8 9.67 88.54 29 5.43 No 52 1.04 Yes 28 0.76 Yes -28 0.73 Yes 46 76.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 9727656 - NM_006826 YWHAQ 1 0.02 0.18 9 -2.27 0 35 6.16 Yes 22 1.13 Yes 24 0.88 Yes -34 0.64 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 9727694 - NM_006826 YWHAQ 1 0.01 0.14 8 3.73 77.35 33 6.42 Yes 20 0.86 Yes 0 0 No -28 0.77 Yes 42 82.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 9728449 - NM_006826 YWHAQ 1 0.02 0.18 12 -5.54 0 14 4.24 No 29 0.38 No 0 0 No -41 0.61 No 29 73.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 9728457 - NM_006826 YWHAQ 1 0.02 0.25 17 -13.74 0 34 6.37 Yes 21 0.4 No 0 0 No -33 0.62 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 9732850 - NM_006826 YWHAQ 1 0.02 0.15 8 3.65 83.57 37 6.24 Yes 68 0.89 Yes 0 0 No -37 0.74 Yes 33 64.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 9760891 - NM_006826 YWHAQ 1 0.06 0.46 26 8.76 82.32 67 7.08 Yes 42 1.21 Yes 0 0 No -25 0.37 No 16 34.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 9769067 - NM_006826 YWHAQ 1 0.08 0.58 27 3.37 73.47 30 9.51 Yes 17 1.44 Yes 29 0.86 Yes -29 0.83 Yes 41 78.54 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 101936551 - NM_003406 YWHAZ 1 0.04 0.76 28 1.59 77.65 19 4.94 No 6 0.5 No 26 0.7 Yes -19 0.58 No 52 61.61 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 101937266 - NM_003406 YWHAZ 1 0.01 0.25 15 -22.67 0 30 7.64 Yes 17 1.28 Yes 0 0 No -29 0.93 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 101939584 - NM_003406 YWHAZ 1 0.01 0.15 10 7.19 80.84 21 7.2 Yes 8 0.61 No 0 0 No -20 0.89 Yes 50 91.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 101960961 - NM_003406 YWHAZ 1 0.23 0.35 19 4.72 66.83 16 4.75 No 11 0.61 No 23 0.82 Yes -23 0.79 Yes 47 89.77 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 101964354 - NM_003406 YWHAZ 1 1.31 2.06 57 1.7 72.98 50 8.04 Yes 37 -2.42 No 20 0.49 Yes -20 0.59 No 50 42.12 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 101964357 - NM_003406 YWHAZ 1 0.36 0.57 27 0.34 61.15 47 7.86 Yes 34 -2.23 No 20 0.49 Yes -17 0.48 No 53 42.56 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr8 101964537 - NM_003406 YWHAZ 1 0.1 0.17 9 4.56 78.16 10 4.49 No NA NA NA 23 0.44 Yes -18 0.33 No 55 38.98 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 101965286 - NM_003406 YWHAZ 1 5.63 8.58 72 7.47 87.91 23 5.29 No 10 0.8 Yes 22 0.92 Yes -22 0.77 Yes 48 64.15 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 101965378 - NM_003406 YWHAZ 1 1.72 2.58 60 4.48 71.33 22 7.33 Yes 9 1.95 Yes 0 0 No -21 0.76 Yes 49 76.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100730386 + NM_003403 YY1 1 0.02 0.13 8 8.08 86.87 35 8.12 Yes 22 1.58 Yes 0 0 No -34 0.79 Yes 36 89.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 100742279 + NM_003403 YY1 1 0.12 0.61 30 5.55 81.46 23 5.29 No 10 0.46 No 0 0 No -22 0.97 Yes 48 97.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 100742807 + NM_003403 YY1 1 0.02 0.11 8 1.1 66.26 26 5.48 No 24 0.51 No 21 0.85 Yes -25 0.9 Yes 45 92.69 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 155630725 - NM_139118 YY1AP1 1 0.73 0.68 34 3.16 68.95 47 7 Yes 39 0.99 Yes 25 0.89 Yes -46 0.84 Yes 24 96.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 155638487 - NM_139118 YY1AP1 1 1.52 1.18 48 -0.31 72.08 28 5.19 No 23 1.36 Yes 0 0 No -27 0.84 Yes 43 72.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 155638569 - NM_139118 YY1AP1 1 106.88 81.15 72 7.58 84.15 29 5.06 No 55 -3.3 No 22 0.84 Yes -22 0.83 Yes 42 63.56 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 155642463 - NM_139118 YY1AP1 1 0.12 0.21 11 -3.77 0 21 4.57 No 26 0.73 No 0 0 No -38 0.64 No 32 76.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 155642519 - NM_139118 YY1AP1 1 1.04 1.94 55 -0.42 0 33 6.24 Yes 38 0.11 No 28 0.85 Yes -32 0.88 Yes 38 92.97 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 155642549 - NM_139118 YY1AP1 1 0.29 0.56 29 5.72 66.49 21 6.41 Yes 73 0.24 No 20 0.61 Yes -20 0.85 Yes 50 68.85 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 155644610 - NM_139118 YY1AP1 1 0.76 1.38 48 3.75 0 28 6.52 Yes 15 0.42 No 27 0.7 Yes -27 0.65 No 39 71.55 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 155649800 - NM_139118 YY1AP1 1 0.54 0.92 34 7.46 87.15 21 6.16 Yes 8 1.13 Yes 20 0.88 Yes -20 0.91 Yes 50 92.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 155650243 - NM_139118 YY1AP1 1 0.48 0.36 20 -2.06 0 38 10.32 Yes 25 0.14 No 19 0.39 Yes -37 0.32 No 37 52.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 173989386 + NM_016653 ZAK 1 0.83 0.26 16 3.02 81.99 23 4.69 No 10 0.35 No 0 0 No -22 0.87 Yes 48 77.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 174034536 + NM_016653 ZAK 1 0.3 0.13 9 1.4 0 42 6.41 Yes 49 -2.88 No 0 0 No -30 0.83 Yes 40 71.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 174128520 + NM_016653 ZAK 1 1.85 0.24 13 4.68 79.42 21 5.83 Yes 8 1.04 Yes 0 0 No -20 0.64 No 50 64.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 50270284 + NM_014838 ZBED4 1 0.3 0.1 7 7.87 80.56 36 7.96 Yes 58 1.2 Yes 0 0 No -35 0.82 Yes 35 89.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 10876366 - NM_001143667 ZBED5 1 0.21 0.14 10 -0.14 63.64 154 8.31 Yes 40 1.02 Yes 0 0 No -29 0.95 Yes 41 57.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 10876629 - NM_001143667 ZBED5 1 6.49 3.92 72 -2.59 0 22 4.71 No 40 1.36 Yes 27 0.64 Yes -39 0.69 Yes 31 81.82 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 10876666 - NM_001143667 ZBED5 1 26.99 16.07 72 5.59 77.83 16 5.38 No 3 1.4 Yes 24 0.88 Yes -24 0.83 Yes 46 78.09 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 10877431 - NM_001143667 ZBED5 1 1.74 1.03 47 10.85 92.63 27 3.94 No 47 0.36 No 26 0.81 Yes -27 0.57 No 43 36.71 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 10877753 - NM_001143667 ZBED5 1 0.44 0.29 18 6.84 83.29 18 7.58 Yes 62 1.17 Yes 29 0.82 Yes -25 0.36 No 45 43.45 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 10900462 + NR_034137 ZBED5-AS1 1 0.42 0.14 9 7.85 86.95 14 7.16 Yes 1 0.12 No 0 0 No -35 0.81 Yes 29 50.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 56182357 - NM_030776 ZBP1 1 15.13 2.6 62 4.77 75.65 37 8.25 Yes 24 1.38 Yes 36 0.74 Yes -36 0.86 Yes 34 94.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 56183776 - NM_030776 ZBP1 1 3.56 0.58 29 11.37 90.33 42 5.6 Yes 65 0.98 Yes 0 0 No -25 0.73 Yes 45 77.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 56186948 - NM_030776 ZBP1 1 0.76 0.21 11 6.52 76.8 27 6.48 Yes 52 0.29 No 0 0 No -26 0.55 No 44 56.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 56187119 - NM_030776 ZBP1 1 0.92 0.19 13 1.63 0 25 5.57 Yes 24 0.32 No 0 0 No -26 0.32 No 46 45.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 56187123 - NM_030776 ZBP1 1 0.7 0.17 9 3.06 76.13 21 5.2 No 20 0.33 No 0 0 No -22 0.28 No 50 47.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 56187141 - NM_030776 ZBP1 1 0.97 0.21 13 3.34 0 15 4.55 No 62 0.39 No 0 0 No -30 0.32 No 53 32.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 56188384 - NM_030776 ZBP1 1 6.42 3.15 63 -0.93 76.18 19 5.48 No 37 0.12 No 0 0 No -23 0.84 Yes 47 87.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 56190230 - NM_030776 ZBP1 1 1.68 0.49 24 6.68 83.02 30 6.47 Yes 17 1.38 Yes 29 0.81 Yes -29 0.69 Yes 41 73.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 101370359 - NM_014415 ZBTB11 1 1.64 1.82 59 4.5 75.51 15 6.31 Yes 70 0.79 Yes 0 0 No -22 0.6 No 48 60.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 101384962 - NM_014415 ZBTB11 1 0.23 0.13 8 5.64 80.08 43 8.48 Yes 30 2.4 Yes 0 0 No -42 0.96 Yes 28 98.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 101384965 - NM_014415 ZBTB11 1 0.26 0.19 11 7.7 82.61 40 8.31 Yes 27 2.41 Yes 0 0 No -39 0.96 Yes 31 98.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16272812 - NM_001287603 ZBTB17 1 1.26 0.58 29 -1.47 62.83 15 6.08 Yes 26 -1.55 No 30 0.38 Yes -14 0.56 No 61 25.85 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 16273843 - NM_001287603 ZBTB17 1 0.78 0.4 22 11.29 95.26 23 6.48 Yes 10 1.4 Yes 0 0 No -22 0.95 Yes 48 95.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 16275061 - NM_001287603 ZBTB17 1 0.42 0.18 11 2.79 69.7 48 7.59 Yes 35 1.71 Yes 0 0 No -47 0.78 Yes 23 79.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 151691495 - NM_020861 ZBTB2 1 4.1 2.57 66 1.52 67.86 32 6.01 Yes 8 0.66 No 0 0 No -35 0.36 No 35 47.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr21 43411999 - NM_001320731 ZBTB21 1 7.48 0.28 16 8.1 81.07 25 3.8 No 6 1.48 Yes 24 0.83 Yes -25 0.59 No 45 68.07 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 109792946 - NM_014797 ZBTB24 1 0.21 0.15 9 9.76 85.31 34 5.04 No 9 0.38 No 0 0 No -33 0.66 Yes 37 66.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 109795567 - NM_014797 ZBTB24 1 0.44 0.29 17 10.57 80.42 26 5.66 Yes 13 0.75 No 0 0 No -25 0.91 Yes 45 89.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 109796767 - NM_014797 ZBTB24 1 1.69 1.03 43 5.81 92.85 13 3.62 No 0 0.23 No 0 0 No -22 0.66 Yes 48 72.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 109797457 - NM_014797 ZBTB24 1 4.15 2.13 64 -2.56 0 28 5.83 Yes 50 0.46 No 0 0 No -27 0.49 No 36 69.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 109797457 - NM_014797 ZBTB24 1 0.2 0.1 7 -2.56 0 28 5.83 Yes 50 0.46 No 0 0 No -27 0.49 No 36 69.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64953915 - NM_001304507 ZBTB25 1 4.14 2.03 67 8.56 88.57 24 4.6 No 4 0.88 Yes 23 0.63 Yes -23 0.68 Yes 47 81.02 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 64962203 - NM_001304507 ZBTB25 1 4.91 0.17 11 6.63 77.42 24 6.85 Yes 1 1.04 Yes 0 0 No -23 0.51 No 47 63.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 64962278 - NM_001304507 ZBTB25 1 36.34 1.17 47 7.02 80.71 29 4.78 No 12 0.65 No 0 0 No -24 0.36 No 46 53.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64962278 - NM_001304507 ZBTB25 1 50.78 1.69 57 7.02 80.71 29 4.78 No 12 0.65 No 0 0 No -24 0.36 No 46 53.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64962671 - NM_001304507 ZBTB25 1 9.79 0.38 19 5.88 83.86 41 6.15 Yes 16 0.73 No 0 0 No -28 0.64 No 46 64.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 64962671 - NM_001304507 ZBTB25 1 2.78 0.13 8 5.88 83.86 41 6.15 Yes 16 0.73 No 0 0 No -28 0.64 No 46 64.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 125684514 - NM_020924 ZBTB26 1 1.74 0.14 8 8.71 86.91 16 5.67 Yes 76 -2.25 No 0 0 No -20 0.45 No 25 35.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 36206812 + NM_014383 ZBTB32 1 3.29 2.18 55 -7.08 0 12 4.24 No 36 0.95 Yes 33 0.85 Yes -48 0.56 No 22 59.23 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 36207414 + NM_014383 ZBTB32 1 0.12 0.14 8 6.05 84.01 20 3.82 No 50 1.46 Yes 0 0 No -20 0.56 No 55 31.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 173839334 + NM_001122770 ZBTB37 1 12.68 1.11 40 6.85 92.45 26 5.32 No 13 0.27 No 25 0.89 Yes -25 0.93 Yes 45 92.11 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 173839334 + NM_001122770 ZBTB37 1 54.15 4.86 72 6.85 92.45 26 5.32 No 13 0.27 No 25 0.89 Yes -25 0.93 Yes 45 92.11 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 173840461 + NM_001122770 ZBTB37 1 0.87 0.11 7 8.02 92.99 16 4.29 No 73 1.14 Yes 0 0 No -21 0.58 No 49 76.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 173845476 + NM_001122770 ZBTB37 1 3.36 0.36 23 8.98 87.11 25 5.95 Yes 46 1.34 Yes 0 0 No -24 0.56 No 46 35.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 141124567 + NM_001080412 ZBTB38 1 0.16 0.22 12 5.79 75.94 29 5.01 No 49 1.04 Yes 28 0.71 Yes -28 0.69 Yes 42 63.04 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 141131752 + NM_001080412 ZBTB38 1 0.22 0.32 18 8.23 88.69 19 5.92 Yes 66 -0.59 No 0 0 No -30 0.79 Yes 40 58.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 141132330 + NM_001080412 ZBTB38 1 1.37 2.4 57 5.55 71.4 27 7.1 Yes 14 1.8 Yes 0 0 No -26 0.78 Yes 44 83.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 141132394 + NM_001080412 ZBTB38 1 1.01 1.68 52 3.56 78.22 38 7.74 Yes 25 0.63 No 0 0 No -40 0.63 No 30 64.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 141142346 + NM_001080412 ZBTB38 1 0.07 0.13 8 4.4 72.72 25 5.41 No 65 0.39 No 0 0 No -24 0.82 Yes 46 90.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 141146475 + NM_001080412 ZBTB38 1 1.36 2.46 58 3.9 83.4 27 5.48 No 14 1.9 Yes 26 0.97 Yes -26 0.8 Yes 44 96.02 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 141148349 + NM_001080412 ZBTB38 1 0.2 0.35 19 4.09 80.43 48 7.35 Yes 6 0.5 No 0 0 No -30 0.48 No 46 58.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 141150993 + NM_001080412 ZBTB38 1 0.25 0.38 13 5.79 79.67 40 4.63 No 23 0.78 Yes 0 0 No -39 0.74 Yes 31 83.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 141157084 + NM_001080412 ZBTB38 1 12.02 20.13 72 3.63 83 41 6.11 Yes 50 0.97 Yes 40 0.19 Yes -40 0.75 Yes 30 85.2 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 141157109 + NM_001080412 ZBTB38 1 14.9 24.21 72 5.5 90.92 28 5.29 No 75 0.95 Yes 27 0.74 Yes -27 0.62 No 13 13.02 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 141159352 + NM_001080412 ZBTB38 1 0.22 0.39 18 6.17 81.76 22 5.72 Yes 9 0.54 No 0 0 No -21 0.78 Yes 49 79.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 141161508 + NM_001080412 ZBTB38 1 0.08 0.15 9 5.25 79.88 23 4.65 No 22 0.59 No 0 0 No -26 0.78 Yes 44 76.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 141166477 + NM_001080412 ZBTB38 1 0.3 0.46 23 5.63 76.01 35 5.75 Yes 22 1.11 Yes 24 0.68 Yes -24 0.77 Yes 46 70.68 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 22828833 + NM_001083621 ZBTB40 1 3.71 1.18 45 8.96 79.12 27 2.87 No 46 2.11 Yes 0 0 No -22 0.56 No 48 40.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 22830731 + NM_001083621 ZBTB40 1 0.31 0.13 8 4.8 85.37 20 5.96 Yes 7 0.08 No 0 0 No -29 0.57 No 41 77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 22846098 + NM_001083621 ZBTB40 1 0.3 0.13 9 1.17 69.77 25 6.22 Yes 12 1.83 Yes 24 0.9 Yes -33 0.65 No 37 73.85 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 197128881 - NR_135153 ZBTB41 1 1.05 0.19 12 6.52 78.01 22 3.98 No 48 0.06 No 0 0 No -26 0.76 Yes 44 82.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 197137048 - NR_135153 ZBTB41 1 1.82 0.33 17 13.48 94.68 31 6.83 Yes 50 1.18 Yes 0 0 No -30 0.63 No 40 65.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 129571074 + NM_014007 ZBTB43 1 0.49 0.11 7 0.28 73.2 24 5.77 Yes 72 1.15 Yes 0 0 No -23 0.64 No 39 61.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 129584167 + NM_014007 ZBTB43 1 0.29 0.15 8 3.41 0 34 5.7 Yes 21 0.8 Yes 0 0 No -33 0.63 No 37 47.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 129584730 + NM_014007 ZBTB43 1 0.81 0.31 14 5.61 78.34 34 6.57 Yes 7 0.58 No 0 0 No -19 0.75 Yes 51 59.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 129584999 + NM_014007 ZBTB43 1 1.52 0.58 35 4.39 78.93 30 5.01 No 17 0.17 No 0 0 No -24 0.55 No 46 76.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 129585002 + NM_014007 ZBTB43 1 0.49 0.21 12 -0.05 70.75 33 5.18 No 20 0.16 No 0 0 No -27 0.57 No 43 74.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 130106112 - NM_001301098 ZBTB44 1 1.07 0.67 32 8.6 88.48 26 4.95 No 5 0.91 Yes 28 0.79 Yes -28 0.38 No 45 53.43 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 130107014 - NM_001301098 ZBTB44 1 0.15 0.13 7 8.22 87.82 27 5.07 No 14 1.13 Yes 27 0.63 Yes -26 0.67 Yes 44 65.61 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 130108449 - NM_001301098 ZBTB44 1 11.22 9.53 72 4.97 80.7 28 6.83 Yes 28 0.14 No 28 0.78 Yes -28 0.53 No 43 58.66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 130108452 - NM_001301098 ZBTB44 1 7.05 6.01 71 6.66 81.49 25 6.61 Yes 25 0.14 No 28 0.78 Yes -25 0.51 No 46 60.22 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 130139697 - NM_001301098 ZBTB44 1 0.48 0.13 8 9.48 90.58 25 4.91 No 43 1.41 Yes 0 0 No -25 0.69 Yes 46 59.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 130158789 - NM_001301098 ZBTB44 1 3.84 1.07 43 7.74 85.05 42 7.79 Yes 29 2.48 Yes 0 0 No -30 0.89 Yes 40 88.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 6646636 + NM_005341 ZBTB48 1 2.39 0.54 29 8.43 73.53 25 6 Yes 32 0.01 No 0 0 No -24 0.69 Yes 46 78.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 6646654 + NM_005341 ZBTB48 1 2.63 0.64 31 7.85 83.18 26 5.13 No 50 0.02 No 0 0 No -25 0.39 No 50 64.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 6647285 + NM_005341 ZBTB48 1 1.59 0.44 24 5.97 80.24 24 5.48 No 29 0.87 Yes 27 0.8 Yes -23 0.93 Yes 47 90.41 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 6647574 + NM_005341 ZBTB48 1 1.33 0.44 25 7.54 79.82 22 5.26 No 70 2.06 Yes 22 0.79 Yes -22 0.52 No 48 63.3 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 6648341 + NM_005341 ZBTB48 1 4.84 1.58 59 -0.39 0 27 5.74 Yes 14 1.2 Yes 0 0 No -26 0.82 Yes 44 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 154986490 + NM_001252406 ZBTB7B 1 86.5 4.14 70 6.04 83.44 29 6.09 Yes 30 0.31 No 28 0.23 Yes -28 0.74 Yes 36 34.98 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 154983395 + NM_001252406 ZBTB7B 1 3.58 0.31 19 -5.09 0 29 5.92 Yes 16 0.53 No 0 0 No -28 0.86 Yes 42 86.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 154986490 + NM_001252406 ZBTB7B 1 17.3 0.86 37 6.04 83.44 29 6.09 Yes 30 0.31 No 28 0.23 Yes -28 0.74 Yes 36 34.98 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 154986490 + NM_001252406 ZBTB7B 1 66.54 3.33 66 6.04 83.44 29 6.09 Yes 30 0.31 No 28 0.23 Yes -28 0.74 Yes 36 34.98 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 33087543 - NM_001308136 ZBTB8OS 1 0.33 1.13 43 -4.2 0 15 3.98 No 8 2.15 Yes 0 0 No -56 0.67 Yes 22 70.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33093467 - NM_001308136 ZBTB8OS 1 3.09 2.44 61 8.22 84.1 32 6.56 Yes 19 1.88 Yes 31 0.9 Yes -31 0.9 Yes 39 96.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 33093467 - NM_001308136 ZBTB8OS 1 0.47 0.35 16 8.22 84.1 32 6.56 Yes 19 1.88 Yes 31 0.9 Yes -31 0.9 Yes 39 96.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 33093467 - NM_001308136 ZBTB8OS 1 0.98 0.71 35 8.22 84.1 32 6.56 Yes 19 1.88 Yes 31 0.9 Yes -31 0.9 Yes 39 96.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 33097477 - NM_001308136 ZBTB8OS 1 0.17 0.13 9 -0.33 0 31 5.39 No 29 0.38 No 0 0 No -30 0.91 Yes 40 90.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 33097481 - NM_001308136 ZBTB8OS 1 125.32 100.74 72 9.7 87.79 27 5.2 No 25 0.39 No 26 0.82 Yes -26 0.92 Yes 44 90.91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 33097481 - NM_001308136 ZBTB8OS 1 0.17 0.14 9 9.7 87.79 27 5.2 No 25 0.39 No 26 0.82 Yes -26 0.92 Yes 44 90.91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 33097481 - NM_001308136 ZBTB8OS 1 1.24 1.01 43 9.7 87.79 27 5.2 No 25 0.39 No 26 0.82 Yes -26 0.92 Yes 44 90.91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 33097481 - NM_001308136 ZBTB8OS 1 1.55 1.32 45 9.7 87.79 27 5.2 No 25 0.39 No 26 0.82 Yes -26 0.92 Yes 44 90.91 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 33097923 - NM_001308136 ZBTB8OS 1 1.52 1.24 52 9.84 84.26 29 5.48 No 38 1.69 Yes 0 0 No -28 0.94 Yes 42 96.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33097947 - NM_001308136 ZBTB8OS 1 1.19 0.99 39 7.52 90.65 27 6.16 Yes 14 1.7 Yes 26 0.96 Yes -26 0.85 Yes 44 94.7 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 33098956 - NM_001308136 ZBTB8OS 1 0.47 0.33 19 7.32 85.51 34 6.8 Yes 73 0.92 Yes 33 0.87 Yes -33 0.78 Yes 37 90.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 33099271 - NM_001308136 ZBTB8OS 1 0.2 0.26 16 -2.39 0 53 6.09 Yes 36 0.81 Yes 0 0 No -48 0.88 Yes 22 97.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33099276 - NM_001308136 ZBTB8OS 1 0.79 1.13 40 -0.83 60.83 48 5.79 Yes 31 0.82 Yes 0 0 No -43 0.91 Yes 27 98.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 33099712 - NM_001308136 ZBTB8OS 1 26.26 39.57 72 9.12 91.75 34 8.65 Yes 32 1.07 Yes 33 0.59 Yes -33 0.62 No 49 56.5 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 33099712 - NM_001308136 ZBTB8OS 1 8.99 13.63 72 9.12 91.75 34 8.65 Yes 32 1.07 Yes 33 0.59 Yes -33 0.62 No 49 56.5 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 33115564 - NM_001308136 ZBTB8OS 1 0.18 0.39 23 5.53 73.95 30 6.37 Yes 71 1.4 Yes 0 0 No -29 0.46 No 47 62.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 79614192 + NM_016010 ZC2HC1A 1 1.59 0.39 23 10.54 88.97 31 6 Yes 42 1.16 Yes 0 0 No -30 0.74 Yes 40 76.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 79617342 + NM_016010 ZC2HC1A 1 3.08 0.65 28 10.14 91.55 23 7.52 Yes 10 1.08 Yes 0 0 No -22 0.66 No 48 79.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 79624224 + NM_016010 ZC2HC1A 1 13.01 3.18 66 5.91 71.55 29 6.79 Yes 63 1.02 Yes 28 0.84 Yes -28 0.91 Yes 42 95.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 79626861 + NM_016010 ZC2HC1A 1 0.79 0.19 12 5.91 79.53 22 6.06 Yes 9 2.35 Yes 0 0 No -30 0.55 No 36 56.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 203765578 + NM_001319238 ZC3H11A 1 8.72 3.15 69 11.85 87.13 28 5.66 Yes 58 0.55 No 28 0.82 Yes -28 0.53 No 45 73.69 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 203772756 + NM_001319238 ZC3H11A 1 0.08 0.17 11 8.16 84.26 23 6.32 Yes 41 1 Yes 0 0 No -30 0.48 No 40 74.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 203776458 + NM_001319238 ZC3H11A 1 0.21 0.43 22 8.01 90.21 29 5.39 No 46 0.24 No 0 0 No -28 0.73 Yes 42 69.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 203786061 + NM_001319238 ZC3H11A 1 0.04 0.11 7 -1.22 0 16 4.12 No 18 0.75 No 0 0 No -30 0.52 No 40 65.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 203787675 + NM_001319238 ZC3H11A 1 0.07 0.13 9 1.35 60.33 31 5.74 Yes 67 1.05 Yes 28 0.61 Yes -30 0.69 Yes 40 75.47 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 203796425 + NM_001319238 ZC3H11A 1 0.07 0.17 11 8 84.99 19 5.66 Yes 6 1.13 Yes 0 0 No -18 0.52 No 52 81.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 203803064 + NM_001319238 ZC3H11A 1 3.21 8.03 72 7.47 91.7 34 5.64 Yes 21 0.19 No 0 0 No -33 0.38 No 44 46.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 203807077 + NM_001319238 ZC3H11A 1 0.05 0.13 8 -0.37 59.32 21 4.42 No 58 0.33 No 24 0.82 Yes -20 0.74 Yes 50 54.7 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 203819622 + NM_001319238 ZC3H11A 1 0.13 0.33 20 6.46 80.59 28 5.24 No 0 1.43 Yes 27 0.8 Yes -27 0.56 No 43 64.71 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 37941062 + NM_001323551 ZC3H12A 1 87.91 23.74 72 3.63 78.18 22 6.75 Yes 19 1.35 Yes 0 0 No -21 0.63 No 39 82.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 37947298 + NM_001323551 ZC3H12A 1 0.17 0.11 8 3.97 73.96 26 5.66 Yes 30 -2.54 No 0 0 No -26 0.65 No 20 40.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 110028516 + NM_033390 ZC3H12C 1 0.43 0.39 24 7.65 77.46 30 6.4 Yes 17 1.77 Yes 0 0 No -29 0.85 Yes 41 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 110035070 + NM_033390 ZC3H12C 1 1.34 1.08 41 -4.51 0 26 5.79 Yes 33 1.12 Yes 0 0 No -25 0.75 Yes 45 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 149774254 - NM_207360 ZC3H12D 1 0.24 0.11 7 9.42 84.81 36 8.18 Yes 23 1.74 Yes 0 0 No -35 0.93 Yes 35 95.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 149778032 - NM_207360 ZC3H12D 1 0.45 0.24 13 -0.77 0 34 7.93 Yes 21 2.07 Yes 25 0.23 Yes -33 0.93 Yes 37 91.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 149778900 - NM_207360 ZC3H12D 1 1.24 0.63 32 8.14 74.82 48 7.46 Yes 71 -3.31 No 0 0 No -34 0.52 No 38 52.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 46531457 - NM_001330566 ZC3H13 1 0.39 0.18 13 4.93 78.26 23 7.02 Yes 31 1.66 Yes 28 0.67 Yes -22 0.87 Yes 48 73.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 46533776 - NM_001330566 ZC3H13 1 0.43 0.36 21 -1.25 0 11 3.87 No 45 2.02 Yes 0 0 No -32 0.66 No 38 65.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 46539568 - NM_001330566 ZC3H13 1 249.03 63 72 5.15 78.59 60 6.86 Yes 75 0.98 Yes 25 0.71 Yes -25 0.58 No 45 63.07 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 46550401 - NM_001330566 ZC3H13 1 9.08 6.04 71 9.02 93.25 28 4.02 No 19 0.57 No 0 0 No -27 0.96 Yes 43 97.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 46575596 - NM_001330566 ZC3H13 1 6.13 8.14 72 7.48 86.98 47 5.5 No 63 1.69 Yes 28 0.75 Yes -28 0.46 No 42 43.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 46594689 - NM_001330566 ZC3H13 1 0.19 0.18 10 -3.58 0 33 6.15 Yes 50 0.68 No 0 0 No -33 0.46 No 38 71.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 46613080 - NM_001330566 ZC3H13 1 0.36 0.35 18 6.5 81.31 22 5.97 Yes 52 1.72 Yes 0 0 No -21 0.95 Yes 49 94.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46613487 - NM_001330566 ZC3H13 1 0.16 0.14 10 6.44 78.3 18 5.82 Yes 5 0.87 Yes 0 0 No -28 0.85 Yes 42 91.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 46619649 - NM_001330566 ZC3H13 1 49.72 6.74 71 1.16 66.65 35 6.24 Yes 46 0.56 No 31 0.73 Yes -34 0.71 Yes 36 82.88 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 46619649 - NM_001330566 ZC3H13 1 40.52 4.4 69 1.16 66.65 35 6.24 Yes 46 0.56 No 31 0.73 Yes -34 0.71 Yes 36 82.88 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 89034201 + NM_001326316 ZC3H14 1 1.02 1 45 6.52 79.72 17 5.22 No 4 0.51 No 27 0.34 Yes -27 0.44 No 47 43.34 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 89038925 + NM_001326316 ZC3H14 1 0.25 0.32 20 -0.3 0 42 7.12 Yes 18 1.09 Yes 0 0 No -31 0.51 No 39 53.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 89040634 + NM_001326316 ZC3H14 1 0.32 0.19 9 5.13 84 54 5.54 No 2 1.5 Yes 26 0.9 Yes -26 0.47 No 38 48.5 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 89043936 + NM_001326316 ZC3H14 1 0.08 0.13 9 1.15 0 47 8.71 Yes 34 1.11 Yes 0 0 No -46 0.79 Yes 24 69.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 89044336 + NM_001326316 ZC3H14 1 0.22 0.38 20 0.72 0 13 3.76 No 44 0.97 Yes 24 0.54 Yes -44 0.84 Yes 26 93.17 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 89047964 + NM_001326316 ZC3H14 1 0.31 0.31 20 8.08 95.86 19 5 No 48 -2.52 No 0 0 No -18 0.53 No 52 64.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 89052914 + NM_001326316 ZC3H14 1 0.46 0.44 23 11.72 87.64 23 6.97 Yes 10 1.49 Yes 22 0.88 Yes -22 0.76 Yes 48 71.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 89059707 + NM_001326316 ZC3H14 1 0.11 0.11 8 7.29 87.11 26 7.92 Yes 25 0.64 No 0 0 No -25 0.7 Yes 45 46.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 89068300 + NM_001326316 ZC3H14 1 1.25 0.72 35 2.56 78.22 25 6.16 Yes 18 -2.33 No 0 0 No -27 0.54 No 43 69.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 89076055 + NM_001326316 ZC3H14 1 154.37 90.68 72 2.63 84.25 24 5.48 No 67 -3.73 No 23 0.57 Yes -23 0.76 Yes 47 79.98 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 187353888 + NM_018471 ZC3H15 1 0.55 1.83 57 8.95 85.6 31 5.74 Yes 28 0.78 Yes 0 0 No -30 0.78 Yes 40 80.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 187364345 + NM_018471 ZC3H15 1 0.14 0.49 25 8.98 72.53 44 5.07 No 72 1.19 Yes 0 0 No -26 0.57 No 30 52.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 187366005 + NM_018471 ZC3H15 1 0.05 0.24 14 -2.19 0 13 3.87 No 41 -4.13 No 0 0 No -35 0.35 No 35 67.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 187370190 + NM_018471 ZC3H15 1 0.03 0.15 10 5.81 77.85 21 4.69 No 18 0.7 No 0 0 No -23 0.65 No 40 64.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 187370237 + NM_018471 ZC3H15 1 0.03 0.14 8 3.42 78.26 28 5.39 No 65 0.67 No 0 0 No -27 0.84 Yes 43 86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 187372121 + NM_018471 ZC3H15 1 0.07 0.26 14 7.78 76.81 30 5.57 Yes -4 0.07 No 24 0.64 Yes -24 0.53 No 46 58.92 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 187373256 + NM_018471 ZC3H15 1 0.16 0.68 31 4.4 82.26 44 8.43 Yes 31 1.38 Yes 20 0.93 Yes -43 0.84 Yes 27 94.29 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 187373537 + NM_018471 ZC3H15 1 0.09 0.29 17 6.94 82.07 26 6.33 Yes 4 0.86 Yes 0 0 No -25 0.85 Yes 45 73.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88638021 + NM_001294340 ZC3H18 1 0.89 1.18 46 9.78 83.53 28 5.64 Yes 72 -4.68 No 0 0 No -28 0.44 No 42 52.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 88655389 + NM_001294340 ZC3H18 1 0.32 0.15 9 6.67 87.16 22 5 No 18 0.76 No 0 0 No -26 0.9 Yes 44 96.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88655439 + NM_001294340 ZC3H18 1 0.84 0.4 24 9.15 80.44 19 5.71 Yes 6 1.44 Yes 0 0 No -18 0.65 No 52 84.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 88676849 + NM_001294340 ZC3H18 1 0.25 0.26 15 6.09 92.71 21 4.8 No 8 0.16 No 0 0 No -23 0.49 No 47 66.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 88695974 + NM_001294340 ZC3H18 1 0.44 0.35 20 5.12 74.53 45 6.92 Yes 75 -0.61 No 0 0 No -32 0.91 Yes 38 93.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 144520253 - NM_015117 ZC3H3 1 0.65 0.22 16 -5.46 0 27 7.21 Yes 14 1.57 Yes 0 0 No -26 0.86 Yes 44 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144525448 - NM_015117 ZC3H3 1 0.94 0.31 18 4.19 0 40 6.45 Yes 36 0.43 No 0 0 No -39 0.79 Yes 31 73.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 144548161 - NM_015117 ZC3H3 1 0.36 0.11 8 9.28 86.77 25 5 No 12 0.67 No 0 0 No -24 0.9 Yes 46 80.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 144567118 - NM_015117 ZC3H3 1 3.82 1.01 39 10.69 85.67 44 6.11 Yes 71 0.62 No 27 0.73 Yes -27 0.93 Yes 43 90.97 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 144605668 - NM_015117 ZC3H3 1 0.33 0.14 10 7.44 83.95 20 5.1 No 76 0.82 Yes 0 0 No -19 0.81 Yes 51 79.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 144623099 - NM_015117 ZC3H3 1 0.23 0.14 9 4.71 84.17 27 5.2 No 31 1.7 Yes 0 0 No -26 0.76 Yes 44 68.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 144623119 - NM_015117 ZC3H3 1 0.63 0.49 26 1.3 0 24 7.41 Yes 11 1.68 Yes 0 0 No -23 0.91 Yes 47 91.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 47582257 - NM_015168 ZC3H4 1 0.13 0.19 13 4.41 91.22 27 5.2 No 35 -1.33 No 0 0 No -26 0.5 No 45 29.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 113064270 + NM_198581 ZC3H6 1 1.06 0.21 14 8.09 89.65 29 6.54 Yes 16 1.23 Yes 0 0 No -22 0.53 No 48 74.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 113064415 + NM_198581 ZC3H6 1 1.09 0.19 13 10.23 84.94 18 6.15 Yes 35 1.27 Yes 0 0 No -22 0.66 No 48 77.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 11845380 - NM_014153 ZC3H7A 1 0.06 0.13 7 -0.44 64.14 18 5.26 No 27 0.64 No 22 0.96 Yes -28 0.42 No 59 27.3 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr16 11855357 - NM_014153 ZC3H7A 1 0.13 0.32 18 -2.94 0 14 4.47 No 16 1.32 Yes 0 0 No -28 0.37 No 42 48.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 11856621 - NM_014153 ZC3H7A 1 0.3 0.63 32 -7.76 0 22 5.1 No 40 0.71 No 25 0.79 Yes -21 0.79 Yes 58 44.71 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 11862264 - NM_014153 ZC3H7A 1 0.06 0.13 9 -3.42 0 28 6.4 Yes 15 0.34 No 0 0 No -27 0.85 Yes 43 88.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 11862345 - NM_014153 ZC3H7A 1 0.43 0.86 40 -2.34 63.41 11 4.69 No 53 0.71 No 0 0 No -61 0.51 No 12 50.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 11862969 - NM_014153 ZC3H7A 1 0.28 0.57 29 -4.03 0 17 4.47 No 29 1.78 Yes 20 0.51 Yes -48 0.53 No 22 61.73 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 11869339 - NM_014153 ZC3H7A 1 1.54 2.83 68 3.36 78.98 18 5.84 Yes 5 0.27 No 0 0 No -22 0.81 Yes 48 78.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 11869419 - NM_014153 ZC3H7A 1 0.41 0.74 34 4.39 68.92 40 7.38 Yes 11 0.55 No 0 0 No -23 0.89 Yes 47 83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 11869489 - NM_014153 ZC3H7A 1 0.06 0.14 7 3.54 70.89 64 8.12 Yes 51 0.71 No 28 0.58 Yes -33 0.76 Yes 37 69.34 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 11870234 - NM_014153 ZC3H7A 1 0.7 1.5 45 4.85 73.44 20 5.1 No 30 0.01 No 25 0.8 Yes -19 0.69 Yes 51 84.21 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 11874271 - NM_014153 ZC3H7A 1 0.06 0.13 9 0.26 73.9 35 5.9 Yes 45 0.06 No 0 0 No -21 0.27 No 49 29.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 11890272 - NM_014153 ZC3H7A 1 5.9 1.72 56 8.03 76.69 36 6.24 Yes 46 -0.72 No 24 0.45 Yes -32 0.39 No 38 56.61 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr22 41716660 + NM_017590 ZC3H7B 1 0.13 0.15 11 1.5 76.63 30 5.63 Yes 42 1.56 Yes 27 0.88 Yes -25 0.68 Yes 45 70.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 41721787 + NM_017590 ZC3H7B 1 0.15 0.15 8 0.01 67.59 27 5.58 Yes 39 0.05 No 0 0 No -26 0.73 Yes 44 76.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 41734678 + NM_017590 ZC3H7B 1 0.12 0.19 13 7.66 85.86 37 6.4 Yes 58 0.11 No 0 0 No -37 0.4 No 33 72.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 41735831 + NM_017590 ZC3H7B 1 0.14 0.18 9 3.15 0 17 4.58 No 27 2.51 Yes 0 0 No -39 0.81 Yes 31 82.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41735944 + NM_017590 ZC3H7B 1 0.39 0.47 28 5.94 83.11 69 8.94 Yes 56 1.29 Yes 0 0 No -35 0.74 Yes 34 79.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 41735993 + NM_017590 ZC3H7B 1 0.07 0.1 7 -0.75 62.31 19 6.52 Yes 6 -0.82 No 0 0 No -42 0.69 Yes 19 49.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 41738536 + NM_017590 ZC3H7B 1 0.43 0.69 29 2.06 0 43 6.33 Yes 37 0.95 Yes 0 0 No -31 0.72 Yes 39 67.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 41742065 + NM_017590 ZC3H7B 1 2.26 2.58 67 5.87 82.06 24 6.47 Yes 11 0.86 Yes 0 0 No -23 0.77 Yes 47 63.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 41751975 + NM_017590 ZC3H7B 1 0.51 0.88 39 5.16 73.99 28 4.25 No 34 0.37 No 0 0 No -20 0.4 No 50 45.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 41752397 + NM_017590 ZC3H7B 1 0.09 0.15 11 -2.92 62.8 28 6.12 Yes 70 0.88 Yes 0 0 No -27 0.6 No 54 17.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 41753238 + NM_017590 ZC3H7B 1 0.74 0.78 37 3.72 71.12 24 5.48 No 65 0.71 No 0 0 No -26 0.24 No 47 26.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112975978 - NM_032494 ZC3H8 1 0.28 0.17 9 5.76 78.52 50 7.8 Yes 72 0.62 No 0 0 No -29 0.85 Yes 41 73.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 112985076 - NM_032494 ZC3H8 1 0.42 0.22 13 10.56 91.66 28 5.27 No 62 -1.9 No 0 0 No -27 0.65 No 47 48.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112988429 - NM_032494 ZC3H8 1 0.92 0.49 24 4.82 76.63 37 6.04 Yes 24 0.2 No 0 0 No -36 0.83 Yes 34 91.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 112996014 - NM_032494 ZC3H8 1 0.36 0.18 11 1.77 73.52 17 4.86 No 60 -4.66 No 0 0 No -24 0.6 No 48 63.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112996101 - NM_032494 ZC3H8 1 0.57 0.25 14 0.51 0 26 4.89 No 5 0.35 No 0 0 No -32 0.35 No 39 29.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 112998070 - NM_032494 ZC3H8 1 0.56 0.31 16 8.3 83.11 30 5.92 Yes 17 0.46 No 29 0.84 Yes -29 0.9 Yes 41 93.36 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 113001025 - NM_032494 ZC3H8 1 2.17 1.14 43 8.55 92.73 43 5.2 No 8 0.65 No 0 0 No -27 0.82 Yes 43 93.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 113002175 - NM_032494 ZC3H8 1 0.45 0.25 12 4.48 90.82 20 4.9 No 35 0.18 No 0 0 No -20 0.69 Yes 51 66.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 113011599 - NM_032494 ZC3H8 1 0.68 0.22 14 10.88 88.9 21 5.23 No 8 0.59 No 0 0 No -20 0.46 No 38 50.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 138738324 - NM_020119 ZC3HAV1 1 0.17 0.29 19 -6.14 0 21 5.28 No 8 1.14 Yes 0 0 No -26 0.71 Yes 44 77.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 138745658 - NM_020119 ZC3HAV1 1 0.08 0.11 8 7.69 81.61 29 5.66 Yes 16 0.49 No 0 0 No -28 0.84 Yes 42 79.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 138749742 - NM_020119 ZC3HAV1 1 0.13 0.26 17 -3.76 0 34 7.13 Yes 21 2.25 Yes 0 0 No -33 0.75 Yes 37 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 138761152 - NM_020119 ZC3HAV1 1 0.05 0.11 7 1.94 0 28 5.83 Yes 15 1.06 Yes 0 0 No -27 0.94 Yes 43 93.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 138783658 - NM_020119 ZC3HAV1 1 0.16 0.19 11 6.27 80.98 41 7.49 Yes 28 1.45 Yes 0 0 No -32 0.79 Yes 38 90.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 138713500 - NM_080660 ZC3HAV1L 1 0.95 0.32 18 7.93 88.95 19 4.9 No 57 -4.44 No 0 0 No -27 0.32 No 51 49.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 138714588 - NM_080660 ZC3HAV1L 1 0.64 0.22 11 7.32 84.63 18 4.68 No 5 0.58 No 0 0 No -17 0.52 No 53 51.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 138717938 - NM_080660 ZC3HAV1L 1 2 0.64 32 4.19 0 27 5.39 No 14 0.03 No 0 0 No -26 0.97 Yes 44 97.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 138719376 - NM_080660 ZC3HAV1L 1 0.45 0.18 8 7 82.15 52 5.2 No 59 1.74 Yes 0 0 No -29 0.5 No 41 62.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 129664218 - NM_001282191 ZC3HC1 1 3.56 2.39 63 3.68 76.7 29 7.38 Yes 16 1.65 Yes 28 0.95 Yes -28 0.86 Yes 42 87.61 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 129679182 - NM_001282191 ZC3HC1 1 1.02 0.85 37 4.93 84.41 37 6.95 Yes 24 1.23 Yes 36 0.55 Yes -36 0.76 Yes 34 79.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 129681314 - NM_001282191 ZC3HC1 1 0.41 0.17 10 5.94 79.53 27 5.26 No 14 0.89 Yes 0 0 No -29 0.59 No 48 58.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 129683721 - NM_001282191 ZC3HC1 1 1.19 0.56 30 -5.74 0 83 9.15 Yes 70 1.12 Yes 25 0.39 Yes -11 0.35 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 129690329 - NM_001282191 ZC3HC1 1 0.25 0.19 12 5.62 85.03 18 4.84 No 67 1.24 Yes 29 0.75 Yes -29 0.85 Yes 41 79.59 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 52889586 - NM_015269 ZCCHC11 1 22.39 8.67 72 6.56 88.94 23 4.9 No 10 1.07 Yes 22 0.93 Yes -22 0.84 Yes 48 85.7 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 52889671 - NM_015269 ZCCHC11 1 0.34 0.13 8 0.57 0 33 6.24 Yes 20 0.05 No 0 0 No -32 0.88 Yes 38 84.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 52897106 - NM_015269 ZCCHC11 1 0.5 0.25 12 5.93 87 20 4.47 No 11 1.31 Yes 0 0 No -23 0.67 Yes 51 56.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 52901135 - NM_015269 ZCCHC11 1 1.85 0.69 34 6.95 86.02 30 6.78 Yes 5 1.26 Yes 0 0 No -37 0.72 Yes 33 84.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52904005 - NM_015269 ZCCHC11 1 0.38 0.18 10 -13.75 75.3 24 5.83 Yes 11 0.2 No 0 0 No -24 0.48 No 46 57.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52904030 - NM_015269 ZCCHC11 1 0.37 0.14 9 2.67 73.57 18 4.27 No 53 0.58 No 24 0.3 Yes -26 0.6 No 53 68.37 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 52905233 - NM_015269 ZCCHC11 1 0.74 0.32 17 4.99 0 39 7.09 Yes 67 1.42 Yes 0 0 No -38 0.82 Yes 32 67.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 52905669 - NM_015269 ZCCHC11 1 0.55 0.21 12 9.77 83.59 31 7.53 Yes 18 0.53 No 0 0 No -30 0.56 No 40 86.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 52909902 - NM_015269 ZCCHC11 1 0.8 0.33 19 4.08 83 41 6.46 Yes 75 -3.42 No 0 0 No -25 0.36 No 45 55.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52911065 - NM_015269 ZCCHC11 1 0.78 0.32 17 10.98 93.87 23 6.29 Yes 10 1.33 Yes 0 0 No -22 0.95 Yes 48 97.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 52911245 - NM_015269 ZCCHC11 1 0.76 0.31 19 7.91 79.42 21 6.33 Yes 8 0.57 No 0 0 No -28 0.39 No 42 59.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 52925842 - NM_015269 ZCCHC11 1 0.75 0.18 11 7.54 77.28 28 5.7 Yes 34 1.27 Yes 0 0 No -28 0.6 No 42 61.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 52929450 - NM_015269 ZCCHC11 1 5.26 2.39 58 9.43 93.22 25 6.26 Yes 12 1.37 Yes 24 0.96 Yes -24 0.97 Yes 46 97.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 52947515 - NM_015269 ZCCHC11 1 4.1 3.49 68 6.74 91.06 25 5.44 No 6 1.26 Yes 0 0 No -25 0.79 Yes 32 60.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 52957948 - NM_015269 ZCCHC11 1 0.53 0.24 16 5.13 65.98 33 6 Yes 20 1.2 Yes 0 0 No -32 0.65 No 38 67.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 52995546 - NM_015269 ZCCHC11 1 3.99 1.79 54 2.61 64.63 35 6.54 Yes 22 0.78 Yes 0 0 No -34 0.66 No 36 67.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 52997081 - NM_015269 ZCCHC11 1 0.27 0.13 8 11.67 96.28 15 5.48 No 47 1.16 Yes 0 0 No -28 0.76 Yes 42 82.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 53000795 - NM_015269 ZCCHC11 1 1.04 0.49 23 1.14 73.22 22 4.65 No -4 0.55 No 25 0.53 Yes -21 0.43 No 46 38.94 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 53004316 - NM_015269 ZCCHC11 1 0.32 0.18 11 11.04 88.27 58 8.83 Yes 56 2.41 Yes 27 0.03 Yes -45 0.63 No 13 68.08 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 31783481 + NM_001282568 ZCCHC17 1 0.17 0.22 13 -6.8 48.12 59 8.27 Yes 27 1.3 Yes 0 0 No -58 0.75 Yes 12 72.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 31785651 + NM_001282568 ZCCHC17 1 0.25 0.29 15 6.61 90.92 28 5.29 No 24 0.32 No 0 0 No -27 0.81 Yes 43 85.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 31791013 + NM_001282568 ZCCHC17 1 12.18 14 72 7.6 76.35 17 5.33 No 4 0.39 No 31 0.54 Yes -31 0.59 No 39 68.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 31797952 + NM_001282568 ZCCHC17 1 0.11 0.15 10 5.19 80.88 29 7.6 Yes 64 -0.72 No 0 0 No -24 0.87 Yes 46 92.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 31804009 + NM_001282568 ZCCHC17 1 0.09 0.14 10 2.47 83.92 38 5.19 No 14 0.86 Yes 0 0 No -26 0.39 No 41 44.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 31811773 + NM_001282568 ZCCHC17 1 0.13 0.17 10 2.3 70.34 17 6.01 Yes 30 1.76 Yes 21 0.67 Yes -30 0.38 No 40 41.55 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 31821708 + NM_001282568 ZCCHC17 1 0.15 0.17 11 5.6 82.76 23 5.2 No 72 0.72 No 0 0 No -23 0.34 No 47 46.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 31830811 + NM_001282568 ZCCHC17 1 0.12 0.13 8 4.33 87.07 31 5.66 Yes 31 1.02 Yes 0 0 No -27 0.44 No 43 61.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 31836694 + NM_001282568 ZCCHC17 1 0.16 0.15 10 11.47 87.44 38 6.53 Yes 12 0.78 Yes 0 0 No -25 0.75 Yes 45 82.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 60220711 + NM_017742 ZCCHC2 1 0.55 0.35 19 1.21 83.95 15 7.61 Yes 69 1.06 Yes 0 0 No -31 0.51 No 31 56.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 60220715 + NM_017742 ZCCHC2 1 0.84 0.51 24 2.66 0 19 7.85 Yes 73 1.05 Yes 0 0 No -35 0.35 No 27 52.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 60225900 + NM_017742 ZCCHC2 1 0.26 0.13 7 -4.53 0 13 4 No 69 2.07 Yes 23 0.87 Yes -40 0.62 No 30 74.49 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr18 60237320 + NM_017742 ZCCHC2 1 1.08 0.49 24 4.13 73.24 25 5.02 No 7 0.29 No 22 0.66 Yes -20 0.44 No 50 48.06 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 25318382 + NM_024936 ZCCHC4 1 0.28 0.13 8 9.42 84.16 30 8.84 Yes 70 0.07 No 0 0 No -29 0.63 No 41 53.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 25320004 + NM_024936 ZCCHC4 1 3.88 1.54 42 1.23 0 9 3.87 No 55 2.3 Yes 0 0 No -43 0.92 Yes 27 88.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 25321336 + NM_024936 ZCCHC4 1 1.26 0.57 26 10.29 89.06 26 6.49 Yes 13 1.71 Yes 0 0 No -25 0.49 No 45 78.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 25350037 + NM_024936 ZCCHC4 1 0.38 0.19 11 8.27 84.4 15 8.59 Yes 2 1.35 Yes 0 0 No -37 0.6 No 33 65.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 25353695 + NM_024936 ZCCHC4 1 2.63 0.68 34 11.26 96.62 32 5.39 No 72 1.17 Yes 31 0.76 Yes -31 0.54 No 39 61.76 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 25354752 + NM_024936 ZCCHC4 1 4.31 1.18 48 7.48 97.28 25 5.13 No 5 0.14 No 0 0 No -25 0.72 Yes 45 72.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 25370659 + NM_024936 ZCCHC4 1 0.43 0.14 9 -8.04 0 12 4 No 40 0.62 No 0 0 No -30 0.59 No 40 68.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 88912126 - NM_001330718 ZCCHC6 1 0.56 0.29 16 8.32 96.53 19 5.46 No 6 1.21 Yes 0 0 No -27 0.69 Yes 43 75.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 88913746 - NM_001330718 ZCCHC6 1 21.74 10.86 72 7.8 89.06 24 5.1 No 11 0.67 No 0 0 No -23 0.51 No 47 52.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 88914114 - NM_001330718 ZCCHC6 1 0.61 0.32 18 6.3 93.44 25 7.45 Yes 25 1.86 Yes 0 0 No -19 0.38 No 42 56.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 88914188 - NM_001330718 ZCCHC6 1 9.31 4.69 70 9.86 89.37 14 5.2 No 1 1.39 Yes 0 0 No -27 0.34 No 46 43.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 88916744 - NM_001330718 ZCCHC6 1 1.38 1.24 50 6.03 84.59 23 4.9 No 66 0.18 No 0 0 No -22 0.91 Yes 48 94.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 88922162 - NM_001330718 ZCCHC6 1 2.23 2.88 67 7.82 95.63 15 5.12 No 2 1.35 Yes 0 0 No -24 0.49 No 17 87.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 88924414 - NM_001330718 ZCCHC6 1 0.18 0.19 14 5.66 90.55 22 7.41 Yes 50 0.36 No 0 0 No -21 0.69 Yes 49 87.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 88936477 - NM_001330718 ZCCHC6 1 0.08 0.11 7 8.31 86.16 20 5.56 No 7 0.92 Yes 0 0 No -19 0.83 Yes 51 87.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 88941407 - NM_001330718 ZCCHC6 1 11.01 7.9 72 9.57 80.04 32 6.86 Yes 19 1.26 Yes 31 0.82 Yes -31 0.43 No 44 47.47 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 88943429 - NM_001330718 ZCCHC6 1 0.14 0.1 7 9.36 80.49 29 5.31 No 60 0.67 No 28 0.79 Yes -28 0.73 Yes 42 69.14 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr9 88949796 - NM_001330718 ZCCHC6 1 0.27 0.15 7 8.31 83.64 21 5.2 No 8 0.69 No 0 0 No -20 0.8 Yes 40 62.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 88960016 - NM_001330718 ZCCHC6 1 0.12 0.15 8 4.23 75.33 31 6.69 Yes 18 0.98 Yes 0 0 No -30 0.94 Yes 40 94.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37127091 + NM_001289121 ZCCHC7 1 4.03 4.06 70 7.04 79.51 51 7.69 Yes 38 1.67 Yes 0 0 No -50 0.67 Yes 20 75.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37134158 + NM_001289121 ZCCHC7 1 0.84 0.81 42 10.73 95.65 18 6.78 Yes 60 1.37 Yes 0 0 No -28 0.65 No 40 75.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 37138716 + NM_001289121 ZCCHC7 1 0.27 0.28 13 12.07 88.27 36 6 Yes 28 1.85 Yes 0 0 No -29 0.61 No 41 82.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 37140019 + NM_001289121 ZCCHC7 1 0.16 0.18 12 -0.6 60.85 29 8.05 Yes 74 -6.18 No 0 0 No -28 0.78 Yes 42 87.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37143212 + NM_001289121 ZCCHC7 1 1.14 1.14 49 7.74 91.04 25 4.82 No 70 1.26 Yes 0 0 No -24 0.72 Yes 26 71.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37144631 + NM_001289121 ZCCHC7 1 1.34 1.32 54 10.57 90.72 33 6.04 Yes 45 0.58 No 0 0 No -24 0.85 Yes 46 86.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37147358 + NM_001289121 ZCCHC7 1 5.04 4.97 71 10.76 88.29 26 8.78 Yes 13 0.98 Yes 25 0.76 Yes -30 0.55 No 40 71.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 37160061 + NM_001289121 ZCCHC7 1 8.51 8.14 71 6.68 85.73 37 5.3 No 8 0.68 No 0 0 No -30 0.63 No 34 65.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 37162772 + NM_001289121 ZCCHC7 1 2.71 2.64 66 7.81 84.69 35 5.99 Yes 15 0.78 Yes 0 0 No -27 0.72 Yes 43 80.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37165842 + NM_001289121 ZCCHC7 1 0.28 0.28 17 2.34 77.13 26 5.2 No -3 0.95 Yes 0 0 No -25 0.93 Yes 45 93.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37186708 + NM_001289121 ZCCHC7 1 2.11 2.15 56 12.2 100 31 5.5 No 69 0.42 No 0 0 No -30 0.79 Yes 40 87.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37188335 + NM_001289121 ZCCHC7 1 1.19 1.24 47 7.47 83.92 30 7.05 Yes 17 1.95 Yes 0 0 No -25 0.54 No 41 72.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 37201259 + NM_001289121 ZCCHC7 1 0.15 0.14 9 7.46 92.6 26 7.2 Yes 13 0.55 No 0 0 No -25 0.81 Yes 45 80.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37206379 + NM_001289121 ZCCHC7 1 0.84 0.82 39 7.95 91.96 47 9.87 Yes 34 1.67 Yes 0 0 No -24 0.85 Yes 46 76.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37208110 + NM_001289121 ZCCHC7 1 0.2 0.17 9 10.08 94.53 32 7.28 Yes 19 0.52 No 0 0 No -31 0.71 Yes 39 81.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 37218963 + NM_001289121 ZCCHC7 1 0.13 0.15 8 5.3 84.41 37 6.14 Yes 56 1.41 Yes 0 0 No -25 0.68 Yes 45 72.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37233675 + NM_001289121 ZCCHC7 1 0.18 0.17 10 5.6 74.73 13 4.59 No 69 1.61 Yes 0 0 No -24 0.44 No 54 55.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 37247066 + NM_001289121 ZCCHC7 1 1.56 1.56 58 8.07 85.65 26 6.55 Yes 13 1.45 Yes 0 0 No -25 0.89 Yes 45 90.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37249489 + NM_001289121 ZCCHC7 1 0.35 0.38 20 6.66 81.17 55 8.77 Yes 42 1.2 Yes 0 0 No -54 0.94 Yes 16 95.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37260451 + NM_001289121 ZCCHC7 1 0.27 0.25 16 2.46 71.64 61 8.62 Yes 48 1.82 Yes 0 0 No -53 0.4 No 17 75.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 37265368 + NM_001289121 ZCCHC7 1 0.12 0.11 7 10.08 87.14 25 5.48 No 12 0.3 No 0 0 No -24 0.6 No 45 45.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 37313755 + NM_001289121 ZCCHC7 1 0.13 0.22 14 4.12 67.95 33 7.81 Yes 20 1.2 Yes 0 0 No -32 0.93 Yes 38 94.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 37349377 + NM_001289121 ZCCHC7 1 0.08 0.13 7 -2.68 53.56 34 5.73 Yes 58 0.36 No 0 0 No -43 0.53 No 27 50.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 37355163 + NM_001289121 ZCCHC7 1 0.08 0.11 7 6.74 90.05 32 4.89 No 26 0.89 Yes 0 0 No -28 0.7 Yes 42 75.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122962462 - NM_017612 ZCCHC8 1 0.89 0.68 33 5.23 78.04 26 4.18 No 61 0.95 Yes 0 0 No -23 0.74 Yes 44 56.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 122962502 - NM_017612 ZCCHC8 1 0.43 0.33 19 3.32 0 34 7.98 Yes 21 0.96 Yes 0 0 No -34 0.72 Yes 36 90.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122963344 - NM_017612 ZCCHC8 1 1.01 0.54 29 1.39 70.5 29 5.29 No 43 0.31 No 0 0 No -28 0.41 No 42 42.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 122973411 - NM_017612 ZCCHC8 1 0.42 0.21 12 0.63 0 28 4.74 No 15 0.65 No 0 0 No -30 0.57 No NA NA NA BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 122975561 - NM_017612 ZCCHC8 1 0.52 0.24 13 3.41 65.06 31 5 No 70 1.04 Yes 0 0 No -30 0.87 Yes 40 81.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 122975601 - NM_017612 ZCCHC8 1 0.69 0.33 18 8.56 91.2 17 5.69 Yes 30 0.97 Yes 0 0 No -42 0.81 Yes 48 73.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 80604800 + NM_032280 ZCCHC9 1 0.6 0.61 29 -4.4 83.01 41 6.67 Yes 34 0.62 No 0 0 No -40 0.76 Yes 30 63.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr12 42707034 - NM_033114 ZCRB1 1 0.15 0.4 21 4.53 73.3 64 8.6 Yes 51 0.04 No 30 0.8 Yes -25 0.81 Yes 45 67.05 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 100020581 - NM_017984 ZCWPW1 1 1.55 0.1 7 5.11 83.47 23 4.99 No 2 0.29 No 0 0 No -22 0.8 Yes 48 79.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 207145349 + NM_001285549 ZDBF2 1 11.7 2.11 59 6.61 89.14 26 5.73 Yes 6 0.59 No 0 0 No -33 0.37 No 45 66.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 207156704 + NM_001285549 ZDBF2 1 6.05 0.46 23 4.96 78.42 31 3.77 No 35 0 No 0 0 No -30 0.43 No 40 65.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 207156734 + NM_001285549 ZDBF2 1 12.77 1.06 39 0.3 74.47 25 4.27 No 31 0.17 No 0 0 No -17 0.42 No 53 47.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 207160112 + NM_001285549 ZDBF2 1 2.66 0.28 19 3.37 0 50 8.13 Yes 37 2.43 Yes 0 0 No -49 0.71 Yes 21 81.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 131483680 - NM_001318023 ZDHHC12 1 0.91 1.25 44 2.83 73.15 39 7.93 Yes 58 -0.58 No 0 0 No -38 0.39 No 32 54.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 131483760 - NM_001318023 ZDHHC12 1 2.73 3.79 68 5.39 85.18 20 5.1 No 7 -0.26 No 24 0.62 Yes -19 0.78 Yes 51 78.26 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 131484097 - NM_001318023 ZDHHC12 1 5109.71 184.94 72 7.44 79.5 28 5.83 Yes 57 1.59 Yes 27 0.92 Yes -27 0.88 Yes 43 89.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 131484881 - NM_001318023 ZDHHC12 1 0.2 0.18 12 2.26 75.79 70 5.98 Yes 57 0.66 No 23 0.95 Yes -26 0.3 No 39 48.97 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 131485019 - NM_001318023 ZDHHC12 1 16.84 16.54 72 8.03 85.91 30 7.14 Yes 65 1.71 Yes 29 0.67 Yes -30 0.64 No 40 75.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 19140679 + NM_019028 ZDHHC13 1 0.77 0.25 15 11.33 94.82 27 6.66 Yes 14 2.57 Yes 0 0 No -26 0.86 Yes 44 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 19146450 + NM_019028 ZDHHC13 1 1.52 0.47 24 8.34 82.69 33 6.57 Yes 20 1.36 Yes 0 0 No -32 0.72 Yes 38 80.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 19164529 + NM_019028 ZDHHC13 1 3.99 1.18 43 4 0 50 5.06 No 23 1.41 Yes 0 0 No -35 0.61 No 35 75.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 19169159 + NM_019028 ZDHHC13 1 0.8 0.36 20 5.4 79.55 22 5.1 No 32 0.77 No 0 0 No -21 0.85 Yes 49 62.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 19184848 + NM_019028 ZDHHC13 1 0.27 0.21 12 -3.73 0 13 5.87 Yes 59 0.55 No 21 0.44 Yes -35 0.49 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 19190371 + NM_019028 ZDHHC13 1 0.25 0.17 9 6.59 81.93 13 4.17 No 45 0.46 No 0 0 No -28 0.56 No 49 69.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 19194227 + NM_019028 ZDHHC13 1 1.21 0.92 39 4.49 74.12 35 5.4 No 16 1.08 Yes 23 0.79 Yes -28 0.4 No 42 80.01 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 157964595 + NM_153746 ZDHHC14 1 4.43 1.56 47 9.3 89.5 24 6.09 Yes 33 0.37 No 0 0 No -23 0.68 Yes 47 71.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 157979355 + NM_153746 ZDHHC14 1 0.84 0.24 13 7.94 84.87 33 6.22 Yes 3 1.7 Yes 0 0 No -26 0.83 Yes 40 66.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 157981121 + NM_153746 ZDHHC14 1 2.45 0.74 31 8.41 89.1 33 6.41 Yes 13 0.36 No 0 0 No -23 0.48 No 45 77.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 157981812 + NM_153746 ZDHHC14 1 0.53 0.21 14 5.19 80.16 16 7.6 Yes 29 1.04 Yes 0 0 No -37 0.45 No 33 65.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 158016661 + NM_153746 ZDHHC14 1 1.63 0.46 21 12.25 86.2 31 4.39 No 74 0.61 No 0 0 No -27 0.82 Yes 43 85.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 158029172 + NM_153746 ZDHHC14 1 0.84 0.21 13 -2.48 0 86 11.51 Yes 7 1.92 Yes 0 0 No -54 0.38 No 21 58.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 158049479 + NM_153746 ZDHHC14 1 1.5 0.39 22 10.03 87.61 26 4.76 No 75 0.49 No 33 0.74 Yes -25 0.55 No 37 61.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr6 158067307 + NM_153746 ZDHHC14 1 0.96 0.51 22 7.92 96.48 27 6.62 Yes 14 2.04 Yes 26 0.94 Yes -26 0.88 Yes 44 94.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 158068297 + NM_153746 ZDHHC14 1 0.15 0.11 8 0.18 0 10 4 No 13 1.95 Yes 0 0 No -25 0.7 Yes 45 85.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158072437 + NM_153746 ZDHHC14 1 1.92 1.01 36 8.45 83.07 22 8.61 Yes 28 2.04 Yes 0 0 No -21 0.68 Yes 49 73.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158077391 + NM_153746 ZDHHC14 1 0.83 0.11 7 8.82 86.15 33 5.71 Yes 45 1.15 Yes 0 0 No -27 0.43 No 38 61.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 158080577 + NM_153746 ZDHHC14 1 3.81 0.43 22 8.47 85.04 28 7.66 Yes 15 1.45 Yes 0 0 No -27 0.82 Yes 43 78.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 158093755 + NM_153746 ZDHHC14 1 116.83 18.08 72 7.09 81.22 120 10.87 Yes NA NA NA 33 0.14 Yes -33 0.6 No 37 79.56 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 99211506 + NM_198046 ZDHHC16 1 1.13 0.18 12 6.44 82.77 65 8.12 Yes NA NA NA 0 0 No -30 0.81 Yes 39 25.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 99212176 + NM_198046 ZDHHC16 1 0.14 0.25 14 1.48 0 25 7.13 Yes 38 -1.6 No 0 0 No -31 0.81 Yes 40 77.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 99212492 + NM_198046 ZDHHC16 1 0.07 0.1 7 7.19 72.39 26 4.84 No 73 -1.83 No 0 0 No -21 0.78 Yes 49 82.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 99212563 + NM_198046 ZDHHC16 1 1.06 1.42 54 7.05 83.88 26 5.46 No 63 -3.24 No 25 0.89 Yes -25 0.92 Yes 45 91.34 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 99212566 + NM_198046 ZDHHC16 1 0.17 0.25 15 7.95 86.89 29 5.73 Yes 66 -3.24 No 0 0 No -28 0.92 Yes 42 91.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 99213374 + NM_198046 ZDHHC16 1 7.18 9.22 72 8.68 83.7 59 9.85 Yes 46 1.13 Yes 26 0.86 Yes -26 0.64 No 15 57.15 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 99215358 + NM_198046 ZDHHC16 1 13.83 9.22 72 3.07 0 21 4.02 No 76 0.03 No 20 0.74 Yes -20 0.55 No 50 65.41 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 99215395 + NM_198046 ZDHHC16 1 1.9 1.38 51 2.46 66.85 14 5.42 No 1 1.23 Yes 24 0.63 Yes -29 0.66 No 46 71.47 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 99215470 + NM_198046 ZDHHC16 1 20.58 14.13 72 4.69 80.6 27 7.94 Yes 14 1.37 Yes 26 0.92 Yes -26 0.85 Yes 44 82.28 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 77158514 + NM_015336 ZDHHC17 1 0.27 0.1 7 8.73 94.58 21 6.56 Yes 8 0.57 No 0 0 No -20 0.84 Yes 50 74.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 77206639 + NM_015336 ZDHHC17 1 0.85 0.26 14 6.4 81.63 29 6.48 Yes 16 1.33 Yes 0 0 No -28 0.91 Yes 42 95.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 77209677 + NM_015336 ZDHHC17 1 14.32 4.65 71 6.79 77.32 32 4.15 No 5 -2.06 No 32 0.55 Yes -32 0.35 No 44 57.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr12 77214837 + NM_015336 ZDHHC17 1 19.96 6.24 71 8.69 88.57 26 4.52 No 3 1.07 Yes 26 0.63 Yes -26 0.47 No 45 59.31 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 77221670 + NM_015336 ZDHHC17 1 0.54 0.21 14 6.36 70.46 26 7.09 Yes 13 1.33 Yes 0 0 No -25 0.62 No 45 67.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 77238658 + NM_015336 ZDHHC17 1 0.45 0.15 9 4.94 70.56 28 5.39 No 15 1.01 Yes 0 0 No -27 0.66 No 43 66.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 27174193 + NM_032283 ZDHHC18 1 0.66 0.79 36 8.08 84.59 46 7.24 Yes 33 1.04 Yes 0 0 No -55 0.57 No 25 67.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 27174197 + NM_032283 ZDHHC18 1 0.28 0.32 20 4.25 0 50 7.49 Yes 37 1.03 Yes 0 0 No -59 0.43 No 21 73.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 27179952 + NM_032283 ZDHHC18 1 0.32 0.44 25 11.21 82.86 28 6.91 Yes -4 1.15 Yes 0 0 No -27 0.8 Yes 43 71.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 17047388 + NM_016353 ZDHHC2 1 1.68 1.17 46 9.62 90.3 31 5.74 Yes 59 0.49 No 0 0 No -30 0.54 No 51 70.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 17053031 + NM_016353 ZDHHC2 1 1.56 1.14 46 8.26 89.09 24 5.28 No 50 0.26 No 0 0 No -23 0.63 No 47 65.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17065526 + NM_016353 ZDHHC2 1 0.54 0.25 15 8.74 88.54 40 6.18 Yes 50 -3.18 No 0 0 No -25 0.53 No 45 58.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17065526 + NM_016353 ZDHHC2 1 0.97 0.54 29 8.74 88.54 40 6.18 Yes 50 -3.18 No 0 0 No -25 0.53 No 45 58.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 17067901 + NM_016353 ZDHHC2 1 0.26 0.17 11 4.92 0 26 6.23 Yes 13 0.99 Yes 0 0 No -25 0.64 No 45 64.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 21952878 - NM_001286638 ZDHHC20 1 42.31 31.79 72 5.2 92.43 55 8.14 Yes 42 0.9 Yes 27 0.72 Yes -55 0.5 No 15 79.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr13 21955650 - NM_001286638 ZDHHC20 1 0.13 0.14 9 3.58 58.56 31 6.07 Yes 49 1.05 Yes 0 0 No -30 0.85 Yes 40 71.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21955686 - NM_001286638 ZDHHC20 1 41.42 42.69 72 4.03 79.7 26 5.34 No 69 1.15 Yes 26 0.9 Yes -25 0.52 No 45 80.43 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr13 21956085 - NM_001286638 ZDHHC20 1 12.83 12.86 72 9.58 85.07 20 4.57 No 7 1.46 Yes 27 0.79 Yes -27 0.46 No 43 61.62 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 21964553 - NM_001286638 ZDHHC20 1 0.39 0.76 36 -0.04 57.61 49 7.85 Yes 36 1.5 Yes 0 0 No -48 0.83 Yes 22 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 21978482 - NM_001286638 ZDHHC20 1 0.38 0.61 24 4.41 68.66 31 6.53 Yes 18 1.19 Yes 30 0.82 Yes -30 0.9 Yes 40 94.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr13 21992426 - NM_001286638 ZDHHC20 1 0.18 0.31 16 6.2 79.8 39 5.43 No 9 0.65 No 0 0 No -33 0.66 Yes 37 64.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 14622690 - NM_178566 ZDHHC21 1 14.64 10.03 72 6.76 79.07 35 5.98 Yes 22 0.52 No 0 0 No -34 0.59 No 36 75.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 14629751 - NM_178566 ZDHHC21 1 0.92 0.57 30 5.17 84.78 32 4.78 No 71 1.13 Yes 0 0 No -31 0.55 No 39 66.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 14643867 - NM_178566 ZDHHC21 1 0.09 0.11 7 7.47 86.94 26 4.84 No 9 0.63 No 0 0 No -25 0.57 No 45 51.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 14652834 - NM_178566 ZDHHC21 1 1.88 2.07 60 8.89 87.85 33 6.78 Yes 20 1.82 Yes 0 0 No -32 0.93 Yes 38 94.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 14654129 - NM_178566 ZDHHC21 1 0.95 1.04 46 5.7 82.88 30 6 Yes 17 0.4 No 0 0 No -29 0.7 Yes 41 72.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 14662321 - NM_178566 ZDHHC21 1 0.45 0.44 23 -0.36 0 31 6.28 Yes 36 0.75 No 0 0 No -30 0.56 No 36 69.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 14672888 - NM_178566 ZDHHC21 1 0.19 0.17 10 5.49 72.28 43 6.3 Yes 53 1.11 Yes 0 0 No -33 0.55 No 37 49.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 14674212 - NM_178566 ZDHHC21 1 0.76 0.19 13 -1 63.8 38 9.68 Yes 58 0.58 No 0 0 No -37 0.71 Yes 33 82.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 14674215 - NM_178566 ZDHHC21 1 1.71 0.47 22 3.78 74.85 35 9.58 Yes 55 0.58 No 0 0 No -34 0.74 Yes 36 85.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 14677370 - NM_178566 ZDHHC21 1 12.85 3.4 65 -4.02 70.77 32 6.48 Yes -4 0.3 No 0 0 No -27 0.78 Yes 43 79.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 14677403 - NM_178566 ZDHHC21 1 64.99 17.36 72 5.49 82.73 28 5.2 No 60 0.65 No 0 0 No -31 0.65 No 39 60.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 14677421 - NM_178566 ZDHHC21 1 1.51 0.35 20 -14.11 0 14 4 No 42 0.63 No 0 0 No -13 0.79 Yes 57 27.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 14677460 - NM_178566 ZDHHC21 1 6.95 1.71 57 1.61 0 16 4.47 No 43 0.86 Yes 0 0 No -25 0.71 Yes 45 71.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 14677471 - NM_178566 ZDHHC21 1 25.51 6.81 72 -1.23 0 15 4.58 No 32 0.85 Yes 30 0.33 Yes -30 0.36 No 31 45.65 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 14677483 - NM_178566 ZDHHC21 1 0.94 0.26 15 4.44 84.82 19 5 No 20 0.86 Yes 30 0.33 Yes -18 0.51 No 43 78.88 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 14677499 - NM_178566 ZDHHC21 1 1.35 0.42 21 -0.93 0 17 4.58 No 4 0.87 Yes 30 0.33 Yes -16 0.47 No 54 54.44 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr9 14678731 - NM_178566 ZDHHC21 1 1.62 0.39 23 4.23 89.99 29 5.91 Yes 45 0.5 No 0 0 No -28 0.8 Yes 42 82.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 14680189 - NM_178566 ZDHHC21 1 0.37 0.21 11 -0.57 82.5 21 5.89 Yes 8 0.79 Yes 23 0.52 Yes -28 0.75 Yes 50 78.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 14683728 - NM_178566 ZDHHC21 1 19.57 9.44 71 7.3 85.94 32 7.28 Yes 19 1 Yes 31 0.72 Yes -31 0.89 Yes 39 84.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 14688306 - NM_178566 ZDHHC21 1 2.03 0.92 44 6 69.88 55 4.73 No 29 1.19 Yes 0 0 No -48 0.79 Yes 22 91.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 113672935 + NM_001320466 ZDHHC23 1 11.4 0.76 38 2.48 73.29 29 7 Yes -2 1.48 Yes 0 0 No -28 0.96 Yes 42 96.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 66310300 - NM_207340 ZDHHC24 1 0.86 0.17 10 12.82 89.66 27 6.27 Yes 36 0.3 No 27 0.8 Yes -30 0.72 Yes 43 42.99 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr3 44959636 - NM_001330761 ZDHHC3 1 2.84 3.06 65 12.67 93.36 31 7 Yes 18 2.25 Yes 30 0.96 Yes -30 0.89 Yes 40 96.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 44959636 - NM_001330761 ZDHHC3 1 0.14 0.17 7 12.67 93.36 31 7 Yes 18 2.25 Yes 30 0.96 Yes -30 0.89 Yes 40 96.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 44964460 - NM_001330761 ZDHHC3 1 0.13 0.15 10 6.74 80.84 29 6.39 Yes 16 1.04 Yes 0 0 No -28 0.94 Yes 42 96.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 44974483 - NM_001330761 ZDHHC3 1 16.19 23.47 72 3.09 64.98 28 6.15 Yes 10 0.42 No 22 0.78 Yes -22 0.62 No 43 76.03 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr3 44985001 - NM_001330761 ZDHHC3 1 0.12 0.13 9 9.37 86.97 40 7.17 Yes 27 0.79 Yes 0 0 No -39 0.68 Yes 31 49.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 45016192 - NM_001330761 ZDHHC3 1 0.87 0.43 22 8.72 87.36 36 4.4 No 48 0.5 No 0 0 No -24 0.92 Yes 46 89.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6618131 + NM_001134387 ZDHHC4 1 22.51 3.46 65 9.48 91.21 33 8.24 Yes 43 1.13 Yes 32 0.81 Yes -32 0.6 No 38 66.97 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 57441381 + NM_015457 ZDHHC5 1 0.07 0.15 9 7.31 94.57 16 6.21 Yes 3 1.63 Yes 0 0 No -22 0.53 No 37 46.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 57441514 + NM_015457 ZDHHC5 1 0.07 0.14 9 5 80.81 26 4.29 No 40 0.03 No 0 0 No -29 0.64 No 41 80.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 57441519 + NM_015457 ZDHHC5 1 0.1 0.19 12 -0.39 0 31 4.62 No 45 0.01 No 0 0 No -34 0.59 No 36 79.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 57457814 + NM_015457 ZDHHC5 1 0.21 0.25 15 -5.88 0 11 4.12 No 11 0.67 No 0 0 No -43 0.69 Yes 27 76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 57464236 + NM_015457 ZDHHC5 1 0.07 0.11 7 0 0 37 6.24 Yes 24 0.36 No 0 0 No -37 0.39 No 34 48.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 114193375 - NM_022494 ZDHHC6 1 2.44 2.19 63 10.47 86.64 31 5.57 Yes 62 1.05 Yes 0 0 No -30 0.93 Yes 40 95.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 114193397 - NM_022494 ZDHHC6 1 1.24 1.24 50 6.98 82.65 53 6.24 Yes 40 1.06 Yes 0 0 No -25 0.51 No 38 53.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 114199385 - NM_022494 ZDHHC6 1 0.45 0.38 20 10.62 88.27 48 8.77 Yes 60 1.57 Yes 0 0 No -47 0.92 Yes 23 89.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 114201571 - NM_022494 ZDHHC6 1 1.03 0.9 41 7.05 78.09 15 5.65 Yes 37 0.41 No 0 0 No -26 0.75 Yes 44 75.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 114202018 - NM_022494 ZDHHC6 1 3.02 2.28 62 10.22 83.23 20 7.86 Yes 7 1.33 Yes 0 0 No -30 0.67 Yes 40 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 114203353 - NM_022494 ZDHHC6 1 4.94 5.83 71 -0.29 0 15 4.56 No 30 1.29 Yes 26 0.78 Yes -38 0.65 No 32 82.32 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 85010745 - NM_001145548 ZDHHC7 1 0.24 0.29 15 7.58 85.02 31 6.08 Yes 43 1.28 Yes 0 0 No -30 0.86 Yes 40 90.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85012929 - NM_001145548 ZDHHC7 1 2.65 1.64 53 8.87 87.01 52 8.54 Yes 39 1.44 Yes 23 0.78 Yes -34 0.48 No 41 56.62 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 85018601 - NM_001145548 ZDHHC7 1 0.73 0.25 15 4.3 71.88 26 5.64 Yes 51 -5.65 No 0 0 No -25 0.87 Yes 45 79.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 85022261 - NM_001145548 ZDHHC7 1 3.73 1.36 51 8.25 83.69 36 6.24 Yes 23 1.52 Yes 0 0 No -35 0.77 Yes 35 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 85022660 - NM_001145548 ZDHHC7 1 32.82 11.58 72 6.86 88.39 34 6.2 Yes 21 0.48 No 0 0 No -33 0.68 Yes 37 75.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 20127640 + NM_013373 ZDHHC8 1 0.58 0.14 10 -7.54 0 78 8.8 Yes 0 0.37 No 0 0 No -12 0.82 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 20128358 + NM_013373 ZDHHC8 1 1.4 0.42 20 10.53 86.89 28 5.83 Yes 54 0.14 No 20 0.91 Yes -27 0.7 Yes 44 74.8 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 20128453 + NM_013373 ZDHHC8 1 0.92 0.35 15 6.09 78.95 18 3.65 No 68 2.17 Yes 0 0 No -23 0.82 Yes 47 69.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 20133010 + NM_013373 ZDHHC8 1 1.81 0.43 25 7.53 90.35 16 6.5 Yes 76 -3.25 No 0 0 No -23 0.6 No 51 59.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 20134543 + NM_013373 ZDHHC8 1 3.37 0.75 37 4.56 75.44 46 7.55 Yes 33 2.26 Yes 20 0.91 Yes -45 0.76 Yes 25 92.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr22 20135166 + NM_013373 ZDHHC8 1 0.65 0.14 9 4.09 64.88 45 7.07 Yes 32 1.23 Yes 0 0 No -44 0.66 No 37 39.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 128957379 - NM_016032 ZDHHC9 1 1.45 0.28 20 6.32 77.23 26 5.23 No 13 0.55 No 25 0.5 Yes -25 0.37 No 45 44.46 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 31663800 + NM_001323638 ZEB1 1 1.23 0.21 15 -10.19 69.81 25 4.91 No 12 0.47 No 0 0 No -24 0.97 Yes 46 91.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 31663811 + NM_001323638 ZEB1 1 1.68 0.31 17 -4.18 0 19 4.24 No 23 0.49 No 0 0 No -18 0.81 Yes 52 94.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 31664620 + NM_001323638 ZEB1 1 0.55 0.13 7 5.93 78.79 26 6.16 Yes 13 0.99 Yes 0 0 No -25 0.78 Yes 45 86.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 31673598 + NM_001323638 ZEB1 1 1.14 0.22 14 7.53 90.74 15 4.98 No 2 0.93 Yes 0 0 No -18 0.6 No 52 82.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 31673661 + NM_001323638 ZEB1 1 3.53 0.68 32 8.15 94.16 24 4.86 No 65 0.91 Yes 0 0 No -23 0.47 No 52 67.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 31673598 + NM_001323638 ZEB1 1 0.4 0.11 7 7.53 90.74 15 4.98 No 2 0.93 Yes 0 0 No -18 0.6 No 52 82.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 31673661 + NM_001323638 ZEB1 1 0.93 0.18 10 8.15 94.16 24 4.86 No 65 0.91 Yes 0 0 No -23 0.47 No 52 67.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 31676648 + NM_001323638 ZEB1 1 103.69 13.35 72 8.61 94.55 26 5.47 No 22 0.58 No 25 0.84 Yes -25 0.58 No 45 54.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 31755355 + NM_001323638 ZEB1 1 23.49 8.65 72 5.89 88.33 27 4.99 No 54 -3.77 No 0 0 No -24 0.83 Yes 46 82.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 31780627 + NM_001323638 ZEB1 1 0.57 0.21 15 6.47 75.48 22 6.3 Yes 9 1.7 Yes 0 0 No -21 0.6 No 49 76.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 31784707 + NM_001323638 ZEB1 1 81.33 30.5 72 7.2 90.31 23 6.39 Yes 10 0.48 No 25 0.5 Yes -28 0.54 No 42 77.86 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 31791281 + NM_001323638 ZEB1 1 0.37 0.31 17 -2.79 0 9 3.87 No 67 0.38 No 21 0.85 Yes -27 0.89 Yes 43 85.22 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 31804236 + NM_001323638 ZEB1 1 0.15 0.18 10 10.39 83.66 22 5.1 No 71 0.98 Yes 0 0 No -24 0.61 No 46 84.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 31809215 + NM_001323638 ZEB1 1 0.23 0.29 16 9.35 83.47 15 5.39 No 2 1.18 Yes 0 0 No -24 0.84 Yes 46 87.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 31815606 + NM_001323638 ZEB1 1 0.11 0.11 8 -7.25 0 17 4 No 34 0.8 Yes 0 0 No -27 0.64 No 43 67.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 82615323 - NR_033196 ZFAND1 1 0.86 0.97 42 4.76 86.07 25 4.99 No 74 1.52 Yes 25 0.78 Yes -24 0.95 Yes 46 85.82 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 82615339 - NR_033196 ZFAND1 1 1.68 1.88 57 3.05 87.16 9 4.69 No 58 1.53 Yes 25 0.78 Yes -50 0.46 No 20 72.45 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 82615356 - NR_033196 ZFAND1 1 0.16 0.17 11 2.88 0 22 7.15 Yes 41 1.53 Yes 25 0.78 Yes -33 0.67 Yes 37 70.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 82621065 - NR_033196 ZFAND1 1 4.73 4.97 72 9.97 85.97 28 5.83 Yes 15 0.62 No 27 0.78 Yes -27 0.89 Yes 43 86.18 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 82626895 - NR_033196 ZFAND1 1 0.24 0.38 21 4.08 83.57 31 7.26 Yes 18 1.18 Yes 0 0 No -30 0.92 Yes 40 91.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 82627154 - NR_033196 ZFAND1 1 0.5 0.71 34 -0.64 49.09 26 5.18 No 33 0.44 No 25 0.84 Yes -54 0.49 No 16 64.51 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr8 82629524 - NR_033196 ZFAND1 1 300.43 76.15 72 4.06 76.49 24 5.96 Yes 11 0.38 No 28 0.53 Yes -28 0.61 No 42 64.56 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 1192768 - NM_182491 ZFAND2A 1 2.87 1.64 54 3.57 83.06 21 6.8 Yes 8 0.15 No 20 0.8 Yes -20 0.86 Yes 50 85.77 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 1192878 - NM_182491 ZFAND2A 1 0.87 0.44 25 -2.2 73.26 23 4.88 No 57 -2.82 No 23 0.55 Yes -23 0.8 Yes 47 57.23 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 220072310 + NM_138802 ZFAND2B 1 0.3 0.1 7 3.73 0 19 4.24 No 48 -0.6 No 0 0 No -18 0.48 No 52 28.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 220074087 + NM_138802 ZFAND2B 1 1.46 0.64 30 9.81 79.42 29 5.65 Yes -2 0.75 No 0 0 No -28 0.65 No 42 48.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 37846622 + NM_021943 ZFAND3 1 0.34 0.26 15 7.48 83.43 27 5.57 Yes 14 0.52 No 0 0 No -26 0.49 No 45 51.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr6 37898144 + NM_021943 ZFAND3 1 0.35 0.49 22 -0.53 0 27 5.57 Yes 39 0.82 Yes 0 0 No -26 0.8 Yes 44 89.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 37905563 + NM_021943 ZFAND3 1 0.07 0.13 7 -0.5 0 43 5.3 No 39 1.05 Yes 0 0 No -37 0.42 No 33 54.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 37971466 + NM_021943 ZFAND3 1 0.29 0.39 20 9.81 88.27 27 6.16 Yes 14 1.3 Yes 26 0.86 Yes -26 0.9 Yes 44 93.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 37984913 + NM_021943 ZFAND3 1 0.14 0.21 11 5.86 80.35 22 5.1 No 60 0.87 Yes 0 0 No -21 0.78 Yes 49 73.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 38030183 + NM_021943 ZFAND3 1 0.75 1.72 58 12 88.27 22 5.86 Yes 21 1.26 Yes 22 0.84 Yes -22 0.66 No 48 71.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr6 38045815 + NM_021943 ZFAND3 1 0.05 0.13 7 10 97.96 34 6.42 Yes 21 0.78 Yes 0 0 No -33 0.75 Yes 37 89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 38052697 + NM_021943 ZFAND3 1 0.09 0.21 14 10.11 81.73 27 5.38 No 34 0.01 No 0 0 No -26 0.83 Yes 44 79.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 38076249 + NM_021943 ZFAND3 1 0.09 0.21 13 -4.47 0 17 4.58 No 4 0.28 No 0 0 No -16 0.81 Yes 54 65.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 38110034 + NM_021943 ZFAND3 1 0.09 0.18 9 13.49 96.75 15 5.16 No 70 1.1 Yes 22 0.27 Yes -28 0.59 No 42 38.22 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 46116314 - NM_001282905 ZFAND4 1 2.94 0.63 27 6.35 85.71 15 3.36 No 53 -3.84 No 0 0 No -21 0.5 No 49 61.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 46135430 - NM_001282905 ZFAND4 1 0.25 0.13 9 -3.59 58.45 18 4.9 No 59 0.59 No 24 0.87 Yes -27 0.62 No 20 39.7 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 46135870 - NM_001282905 ZFAND4 1 2.14 1.13 43 10.61 85.86 40 7.16 Yes 30 1.14 Yes 29 0.39 Yes -29 0.52 No 44 48.2 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 46136619 - NM_001282905 ZFAND4 1 1.77 0.89 34 6.51 84.43 24 4.75 No 39 1.13 Yes 0 0 No -23 0.58 No 47 63.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 46144548 - NM_001282905 ZFAND4 1 0.69 0.32 18 4.6 86.46 23 5.83 Yes 10 1.12 Yes 0 0 No -22 0.86 Yes 48 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 46144551 - NM_001282905 ZFAND4 1 4.19 1.99 55 5.41 83.74 20 5.57 Yes 7 1.15 Yes 0 0 No -19 0.73 Yes 51 87.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 46147074 - NM_001282905 ZFAND4 1 0.83 0.35 19 6.6 79.94 33 5.83 Yes 59 0.32 No 32 0.87 Yes -32 0.79 Yes 38 80.18 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 80365607 + NM_001242918 ZFAND6 1 0.23 0.17 11 9.2 83.47 48 5.17 No 10 0.55 No 31 0.87 Yes -26 0.78 Yes 44 86.53 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 80367505 + NM_001242918 ZFAND6 1 0.34 0.21 14 9.19 93.81 33 7.18 Yes 20 1.56 Yes 29 0.79 Yes -32 0.72 Yes 38 76.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 80390757 + NM_001242918 ZFAND6 1 17.36 9.93 72 7.54 80.9 45 7.32 Yes 17 0.88 Yes 29 0.82 Yes -29 0.86 Yes 41 93.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 80414089 + NM_001242918 ZFAND6 1 1.92 4.39 68 7.42 76.47 13 5.25 No 0 0.19 No 25 0.88 Yes -25 0.82 Yes 45 79.7 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 80414101 + NM_001242918 ZFAND6 1 0.36 0.88 36 3.29 0 18 4.58 No 64 -4.8 No 0 0 No -37 0.69 Yes 33 61.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 135491293 - NM_001029939 ZFAT 1 0.13 0.14 8 5.65 79.07 21 4.37 No 8 1.48 Yes 0 0 No -25 0.45 No 50 60.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 135514211 - NM_001029939 ZFAT 1 1.58 2.07 54 10.14 87.24 12 5.57 Yes -1 1.05 Yes 0 0 No -25 0.82 Yes 45 82.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 135521600 - NM_001029939 ZFAT 1 0.17 0.14 9 7.27 81.29 15 7.61 Yes 2 0.46 No 0 0 No -27 0.63 No 43 49.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 135524841 - NM_001029939 ZFAT 1 0.13 0.29 20 0.54 0 30 5.65 Yes 33 0.09 No 0 0 No -25 0.74 Yes 45 90.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 135532681 - NM_001029939 ZFAT 1 0.12 0.31 19 11.28 90.13 29 5.92 Yes 24 1.03 Yes 0 0 No -28 0.61 No 42 86.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 135542845 - NM_001029939 ZFAT 1 0.06 0.11 7 7.45 81.38 21 8.83 Yes 8 -0.11 No 0 0 No -40 0.45 No 30 61.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 135551033 - NM_001029939 ZFAT 1 0.06 0.14 7 9.76 98.64 35 10.22 Yes 22 1.2 Yes 0 0 No -34 0.83 Yes 36 88.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 135575991 - NM_001029939 ZFAT 1 0.13 0.29 18 5.8 86.96 19 6.02 Yes 76 -3.87 No 0 0 No -22 0.75 Yes 48 75.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 135577396 - NM_001029939 ZFAT 1 1.99 4.08 62 10.64 88.64 22 5.74 Yes 25 0.29 No 21 0.81 Yes -21 0.78 Yes 49 80.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 135586224 - NM_001029939 ZFAT 1 0.24 0.19 11 13.13 90.92 26 5.54 No 66 1.55 Yes 0 0 No -25 0.75 Yes 45 74.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 135600637 - NM_001029939 ZFAT 1 0.76 0.88 37 0.02 86.53 33 6.65 Yes 20 2.09 Yes 0 0 No -22 0.7 Yes 48 62.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr12 72009077 - NM_144982 ZFC3H1 1 0.14 0.14 9 6.67 84.35 23 5.38 No 61 0.81 Yes 0 0 No -22 0.61 No 48 69.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 72012216 - NM_144982 ZFC3H1 1 1.06 0.99 39 7.93 84.9 28 6.63 Yes 51 -1.87 No 0 0 No -25 0.41 No 43 65.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 72013910 - NM_144982 ZFC3H1 1 0.1 0.11 7 2.43 0 22 5.29 No 43 1.45 Yes 26 0.83 Yes -21 0.85 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 72017962 - NM_144982 ZFC3H1 1 0.41 0.26 14 9.42 92.2 18 5.61 Yes 74 -4.26 No 0 0 No -22 0.62 No 48 78.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 72018060 - NM_144982 ZFC3H1 1 0.23 0.18 10 1.81 76.69 9 4.69 No 45 -3.36 No 0 0 No -34 0.56 No 36 49.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 72024498 - NM_144982 ZFC3H1 1 0.6 0.65 33 1.49 0 36 9.82 Yes 40 0.31 No 0 0 No -38 0.43 No 32 64.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 72026818 - NM_144982 ZFC3H1 1 0.45 0.36 19 10.7 91.48 23 5.17 No 2 0.02 No 22 0.82 Yes -23 0.71 Yes 47 57.13 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 72028602 - NM_144982 ZFC3H1 1 0.57 0.67 37 -1 0 30 6.25 Yes 17 0.76 No 0 0 No -24 0.62 No 41 67.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 72030467 - NM_144982 ZFC3H1 1 0.22 0.17 12 5.98 90.94 13 5.2 No 34 0.91 Yes 23 0.86 Yes -28 0.55 No 50 63.48 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr12 72050344 - NM_144982 ZFC3H1 1 0.11 0.15 9 7.96 90.79 25 5.3 No 25 0.86 Yes 31 0.79 Yes -24 0.51 No 42 51.49 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 23995886 - NM_033400 ZFHX2 1 2.26 0.13 7 5.79 78.25 30 6.92 Yes 17 1.02 Yes 0 0 No -29 0.97 Yes 41 97.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 72863756 - NM_001164766 ZFHX3 1 11.42 1.78 56 1.89 78.68 26 5.73 Yes 13 1.2 Yes 0 0 No -32 0.53 No 45 58.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 75191034 + NM_001318475 ZFP1 1 0.87 0.25 15 8.98 93.18 16 6.14 Yes 9 1.28 Yes 21 0.79 Yes -21 0.95 Yes 49 95.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 75192979 + NM_001318475 ZFP1 1 5.6 1.56 50 6.94 86.16 20 5.57 Yes 7 1.09 Yes 0 0 No -19 0.67 Yes 51 88.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75198725 + NM_001318475 ZFP1 1 3.11 0.9 37 3.25 88.76 21 5.19 No 8 0.51 No 0 0 No -23 0.78 Yes 47 80.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 75200709 + NM_001318475 ZFP1 1 1.12 0.31 18 4.55 81.32 19 5.07 No 73 -2.96 No 0 0 No -27 0.79 Yes 43 83.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36828299 - NM_020917 ZFP14 1 5.39 0.53 28 -0.19 81.36 33 5.51 No 71 -1.44 No 0 0 No -32 0.81 Yes 38 83.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36843079 - NM_020917 ZFP14 1 1.93 0.18 10 3.01 0 27 5.54 No 57 0.79 Yes 0 0 No -27 0.68 Yes 44 75.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38134241 - NM_001320668 ZFP30 1 2.19 0.33 19 2.17 0 27 5.31 No 76 1.18 Yes 0 0 No -26 0.71 Yes 44 57.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 38134245 - NM_001320668 ZFP30 1 6.28 0.81 36 2.01 75.86 23 4.94 No 72 1.18 Yes 0 0 No -22 0.69 Yes 48 59.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 38134262 - NM_001320668 ZFP30 1 68.55 8.94 72 5.86 91.65 38 6.02 Yes 55 1.18 Yes 26 0.73 Yes -29 0.5 No 41 39.21 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 38142474 - NM_001320668 ZFP30 1 0.41 0.13 8 3.97 84.41 21 6 Yes 54 0.78 Yes 26 0.77 Yes -20 0.49 No 50 72.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 39898356 + NM_003407 ZFP36 1 0.05 0.15 11 9.72 89.29 34 5.91 Yes 65 -1.25 No 28 0.77 Yes -32 0.8 Yes 38 73.74 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 39898384 + NM_003407 ZFP36 1 0.08 0.22 14 -4.02 71.6 21 6.07 Yes 8 1.44 Yes 28 0.77 Yes -20 0.75 Yes 50 68.68 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 43452888 - NM_006887 ZFP36L2 1 0.53 0.97 47 0.44 0 35 8.1 Yes 22 0.69 No 0 0 No -34 0.85 Yes 36 87.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 144335057 + NM_173832 ZFP41 1 19.23 1.18 48 6.11 84.78 24 3.43 No -2 0.88 Yes 0 0 No -23 0.36 No 44 31.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 144337163 + NM_173832 ZFP41 1 27.25 1.64 60 9.72 87.57 32 6.82 Yes 8 0.41 No 0 0 No -24 0.53 No 46 39.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 144339008 + NM_173832 ZFP41 1 1.76 0.11 7 4.6 77.13 43 6.56 Yes 39 0.54 No 0 0 No -29 0.53 No 41 74.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 144340469 + NM_173832 ZFP41 1 3.14 0.29 18 7.82 89.82 20 4.94 No 7 0.14 No 0 0 No -22 0.63 No 48 72.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr20 50713651 - NM_199427 ZFP64 1 3.4 0.31 15 8.93 91.46 20 4.83 No 7 0.08 No 25 0.94 Yes -20 0.89 Yes 50 91.2 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 50736058 - NM_199427 ZFP64 1 8.78 0.54 29 10.57 88.27 103 9.55 Yes 72 -0.61 No 0 0 No -25 0.24 No 47 36.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 50751721 - NM_199427 ZFP64 1 2.63 0.22 14 5.68 85.97 37 7.28 Yes 24 0.69 No 0 0 No -26 0.68 Yes 34 80.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 50769968 - NM_199427 ZFP64 1 541.51 37.14 72 5.38 88.3 16 9.44 Yes 3 1.44 Yes 25 0.87 Yes -25 0.97 Yes 45 97.13 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 50787215 - NM_199427 ZFP64 1 0.21 0.13 9 6.02 84.47 27 5.94 Yes -2 0.58 No 0 0 No -26 0.75 Yes 44 80.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 50791019 - NM_199427 ZFP64 1 1.07 0.71 32 4.74 84.41 34 7.31 Yes 41 0.97 Yes 0 0 No -27 0.5 No 41 61.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 50801862 - NM_199427 ZFP64 1 0.93 0.61 27 4.9 76.55 24 5.93 Yes 59 -2.25 No 0 0 No -23 0.89 Yes 47 91.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 50803605 - NM_199427 ZFP64 1 12.79 7.22 72 2.71 0 13 3.87 No 23 1.02 Yes 29 0.81 Yes -35 0.8 Yes 35 93.37 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 40955197 + NM_001320179 ZFP69 1 61.81 2.83 68 -0.61 72.62 25 6.22 Yes 12 1.09 Yes 27 0.91 Yes -24 0.9 Yes 46 88.92 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 40956451 + NM_001320179 ZFP69 1 1.63 0.19 10 7.81 90.2 25 5.9 Yes 24 1.12 Yes 24 0.78 Yes -24 0.67 Yes 34 55.35 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 36891306 - NM_133466 ZFP82 1 0.94 0.25 13 6.83 91.76 26 4.23 No 41 0.23 No 0 0 No -25 0.93 Yes 45 93.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 36896578 - NM_133466 ZFP82 1 10.81 2.07 55 4.37 78.31 52 7.06 Yes 16 0.67 No 31 0.81 Yes -28 0.7 Yes 42 70.63 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 68575550 + NR_130978 ZFP90 1 2.8 0.69 29 9.3 97.96 24 8.26 Yes 30 -1.46 No 0 0 No -23 0.51 No 47 79.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68588975 + NR_130978 ZFP90 1 1.63 0.33 17 11.07 93.93 22 6.93 Yes 38 0.71 No 27 0.34 Yes -21 0.6 No 49 82.51 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 68591907 + NR_130978 ZFP90 1 1.13 0.21 10 -6.76 0 17 3.99 No 45 -4.23 No 27 0.75 Yes -28 0.67 Yes 42 50.65 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 68591942 + NR_130978 ZFP90 1 0.51 0.14 8 5.53 80.54 28 5.65 Yes 21 0.5 No 27 0.75 Yes -27 0.8 Yes 43 80.02 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 68596891 + NR_130978 ZFP90 1 9.79 3.5 65 7.6 77.76 32 6.2 Yes 19 0.97 Yes 27 0.86 Yes -27 0.52 No 43 61.05 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 68596894 + NR_130978 ZFP90 1 1.13 0.43 21 3.17 82.64 35 6.39 Yes 22 0.97 Yes 0 0 No -30 0.56 No 40 61.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68600872 + NR_130978 ZFP90 1 0.62 0.22 12 3.99 88.01 26 4.82 No 13 0.6 No 0 0 No -19 0.65 No 51 77.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 58372233 + NM_001197051 ZFP91 1 0.09 0.14 8 5.84 90.56 35 4.3 No 39 0.72 No 0 0 No -31 0.51 No 39 58.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 58383491 + NM_001197051 ZFP91 1 0.05 0.13 9 10.66 81.44 34 5.14 No 17 0.06 No 0 0 No -24 0.6 No 46 47.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 58384643 + NM_001197051 ZFP91 1 0.16 0.39 22 3.62 75.67 35 5.49 No 34 2.21 Yes 0 0 No -28 0.54 No 42 48.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 64855512 + NM_006782 ZFPL1 1 0.57 0.24 13 8.67 77.28 14 8.88 Yes 70 2.52 Yes 0 0 No -32 0.63 No 34 46.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 88579096 + NM_153813 ZFPM1 1 0.49 0.15 10 -0.75 67.58 20 5.74 Yes 7 0.65 No 0 0 No -19 0.85 Yes 51 74.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88579787 + NM_153813 ZFPM1 1 0.83 0.29 15 7.3 78.62 22 6.85 Yes 71 -4.01 No 0 0 No -21 0.89 Yes 49 92.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 88582520 + NM_153813 ZFPM1 1 1.2 0.25 15 9.13 85.98 32 5.38 No 40 1.43 Yes 25 0.39 Yes -52 0.36 No 18 43.69 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 88582966 + NM_153813 ZFPM1 1 1.25 0.26 16 7.84 85.13 17 6.18 Yes 4 1.74 Yes 28 0.55 Yes -28 0.37 No 42 50.08 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 88598412 + NM_153813 ZFPM1 1 0.43 0.11 7 -2.62 62.26 29 6.4 Yes 16 2.3 Yes 0 0 No -28 0.85 Yes 42 79.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 88598429 + NM_153813 ZFPM1 1 0.34 0.11 7 3.74 81 25 5.1 No 33 2.3 Yes 0 0 No -24 0.36 No 25 46.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 88599559 + NM_153813 ZFPM1 1 2.69 0.57 31 1.45 0 33 6.24 Yes 46 1.73 Yes 0 0 No -32 0.62 No 38 70.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 32364148 - NR_144318 ZFR 1 0.13 0.35 18 -3.72 0 37 7.15 Yes 24 1.15 Yes 0 0 No -36 0.9 Yes 34 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 32371670 - NR_144318 ZFR 1 0.06 0.15 9 2.56 60.6 35 5.36 No 17 0.75 No 0 0 No -35 0.42 No 33 56.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 32389717 - NR_144318 ZFR 1 0.09 0.39 21 0.16 0 45 7.87 Yes 32 1.64 Yes 0 0 No -44 0.88 Yes 26 93.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 32395410 - NR_144318 ZFR 1 0.23 0.57 30 -15.53 0 24 7.49 Yes 11 0.24 No 0 0 No -23 0.54 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 32407112 - NR_144318 ZFR 1 0.38 0.83 36 4.31 87.33 18 3.92 No 57 0.99 Yes 0 0 No -46 0.68 Yes 24 83.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 32421760 - NR_144318 ZFR 1 0.31 0.22 13 4.62 71.51 86 9.59 Yes 73 1.5 Yes 0 0 No -21 0.55 No 48 73.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 24170816 + NM_001330327 ZFX 1 0.94 0.26 15 -11.18 0 12 3.87 No 67 -5.27 No 22 0.57 Yes -11 0.57 No 59 28.9 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chrX 24177611 + NM_001330327 ZFX 1 0.28 0.14 9 -0.45 83 34 5.98 Yes 21 0.19 No 0 0 No -29 0.27 No 37 65.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 24177615 + NM_001330327 ZFX 1 4.32 1.78 52 2 0 38 6.31 Yes 25 0.17 No 0 0 No -37 0.26 No 33 62.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 24177834 + NM_001330327 ZFX 1 0.61 0.22 15 5.92 82.31 29 5.92 Yes 66 1.04 Yes 0 0 No -28 0.91 Yes 42 83.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 24179831 + NM_001330327 ZFX 1 32.08 13.35 72 7.89 85.05 50 6.27 Yes 37 2.37 Yes 28 0.02 Yes -49 0.79 Yes 21 89.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chrX 24179835 + NM_001330327 ZFX 1 1.03 0.4 22 1.32 0 54 6.44 Yes 41 2.36 Yes 0 0 No -53 0.77 Yes 17 89.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 24191747 + NM_001330327 ZFX 1 1.39 0.25 14 5.11 86.67 27 5.39 No 43 0.49 No 0 0 No -26 0.74 Yes 44 65.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 24226662 + NM_001330327 ZFX 1 0.42 0.38 19 10.47 97.24 31 6 Yes 18 0.23 No 0 0 No -31 0.65 No 39 64.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chrX 24227010 + NM_001330327 ZFX 1 0.18 0.17 9 -1.64 0 32 6.03 Yes 36 1.31 Yes 27 0.63 Yes -29 0.41 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 73442461 - NM_001281734 ZFYVE1 1 0.62 0.22 14 10.56 83.25 43 7.81 Yes 30 1.64 Yes 25 0.67 Yes -42 0.72 Yes 28 93.19 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 73491570 - NM_001281734 ZFYVE1 1 1.01 0.44 18 3.97 65.89 32 6.72 Yes 19 2.11 Yes 0 0 No -31 0.8 Yes 39 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 79735945 + NM_001105251 ZFYVE16 1 0.65 0.24 14 5.18 87.43 30 5.2 No 72 0.78 Yes 0 0 No -29 0.8 Yes 41 89.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 79736719 + NM_001105251 ZFYVE16 1 0.63 0.21 13 4.42 77.23 32 5.72 Yes 13 0.74 No 0 0 No -25 0.44 No 45 49.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 79739021 + NM_001105251 ZFYVE16 1 0.36 0.14 7 1.45 76.41 42 5.91 Yes 8 0.82 Yes 0 0 No -29 0.65 No 41 50.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 79739612 + NM_001105251 ZFYVE16 1 3.39 0.97 40 9.11 79.88 31 6.71 Yes 18 0.18 No 30 0.9 Yes -30 0.91 Yes 40 89.01 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 41101353 + NM_001077268 ZFYVE19 1 0.89 0.17 10 2.82 85.96 21 3.84 No 38 0.55 No 28 0.44 Yes -16 0.21 No 54 47.59 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 41102025 + NM_001077268 ZFYVE19 1 0.83 0.4 22 7.62 76.91 26 5.5 No 13 1.33 Yes 27 0.84 Yes -25 0.91 Yes 45 94.76 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 41102274 + NM_001077268 ZFYVE19 1 0.54 0.19 12 -9.48 0 14 3.87 No 38 0.66 No 27 0.94 Yes -33 0.72 Yes 37 78.06 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 41102351 + NM_001077268 ZFYVE19 1 1.78 0.69 35 8.08 87.98 30 5.45 No 24 0.17 No 0 0 No -23 0.75 Yes 47 66.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41102585 + NM_001077268 ZFYVE19 1 2.04 0.69 39 7.74 91.32 39 5.43 No 69 0.46 No 0 0 No -27 0.57 No 44 71.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41104910 + NM_001077268 ZFYVE19 1 0.7 0.18 8 7.16 86.09 17 4.8 No 21 1.66 Yes 0 0 No -33 0.52 No 37 87.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41105546 + NM_001077268 ZFYVE19 1 0.29 0.14 7 3.76 0 15 4.47 No 43 2.13 Yes 0 0 No -49 0.69 Yes 21 83.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41105546 + NM_001077268 ZFYVE19 1 0.83 0.32 21 3.76 0 15 4.47 No 43 2.13 Yes 0 0 No -49 0.69 Yes 21 83.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41105743 + NM_001077268 ZFYVE19 1 0.85 0.22 12 4.81 78.1 45 6.62 Yes 32 1.26 Yes 0 0 No -44 0.39 No 26 56.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41106410 + NM_001077268 ZFYVE19 1 0.62 0.24 15 8.83 88.63 19 6.06 Yes 76 2.04 Yes 0 0 No -26 0.68 Yes 44 75.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104192155 + NM_001198953 ZFYVE21 1 0.44 0.13 7 8.14 82.04 47 6.54 Yes 17 1.9 Yes 0 0 No -29 0.76 Yes 41 81.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104193895 + NM_001198953 ZFYVE21 1 0.7 0.28 14 6.06 88.22 23 4.9 No 72 -3.43 No 22 0.8 Yes -22 0.81 Yes 48 72.72 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 104195491 + NM_001198953 ZFYVE21 1 0.3 0.15 10 7.32 86.61 33 6.99 Yes 58 0.28 No 0 0 No -35 0.48 No 35 39.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68215844 - NM_015346 ZFYVE26 1 0.34 0.21 12 0.89 79.53 54 8.28 Yes 41 1.47 Yes 0 0 No -23 0.67 Yes 47 85.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68215989 - NM_015346 ZFYVE26 1 0.48 0.21 11 11.71 87.02 43 7.54 Yes 30 1.21 Yes 0 0 No -27 0.43 No 43 75.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68228298 - NM_015346 ZFYVE26 1 0.56 0.33 19 -1.41 0 35 5.27 No 39 0.53 No 0 0 No -34 0.66 No 36 65.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68233277 - NM_015346 ZFYVE26 1 0.4 0.22 13 8.96 94.79 28 5.24 No 42 0.63 No 0 0 No -22 0.38 No 48 46.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68238847 - NM_015346 ZFYVE26 1 1.28 0.63 33 4.86 83.1 21 5 No 8 1.03 Yes 0 0 No -20 0.96 Yes 50 96.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68241850 - NM_015346 ZFYVE26 1 2.36 1.6 52 -2.27 80.35 24 5 No 20 -1.79 No 20 0.68 Yes -23 0.97 Yes 47 98.48 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 68242746 - NM_015346 ZFYVE26 1 0.36 0.22 11 2.72 69.85 24 7.21 Yes 11 2.25 Yes 0 0 No -23 0.8 Yes 47 73.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68244986 - NM_015346 ZFYVE26 1 0.22 0.1 7 -8.13 0 18 4.08 No 67 -5.32 No 23 0.79 Yes -17 0.8 Yes 51 36.8 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 68262238 - NM_015346 ZFYVE26 1 1.09 0.5 30 5.28 69.3 32 6.85 Yes 2 0.99 Yes 0 0 No -31 0.63 No 39 72.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68276004 - NM_015346 ZFYVE26 1 0.27 0.17 12 1.03 72.22 85 6.98 Yes 23 1.24 Yes 0 0 No -35 0.87 Yes 35 93.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 99504521 + NM_001002261 ZFYVE27 1 1.04 0.38 21 3.77 76.45 24 5.2 No 58 1.29 Yes 0 0 No -23 0.94 Yes 47 96.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 99511147 + NM_001002261 ZFYVE27 1 332.42 42.68 72 5.85 92.12 20 4.69 No 40 -0.6 No 30 0.67 Yes -19 0.61 No 51 91.28 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 99514483 + NM_001002261 ZFYVE27 1 2.28 1.01 42 9.37 79.76 56 5.98 Yes 43 1.14 Yes 23 0.82 Yes -23 0.79 Yes 47 73.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 99517624 + NM_001002261 ZFYVE27 1 2.08 0.93 44 7.63 76.25 35 6.08 Yes 51 -2.67 No 28 0.72 Yes -28 0.55 No 47 55.18 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr20 62340662 + NM_001083113 ZGPAT 1 0.36 0.38 19 7.67 85.92 21 5 No 8 0.8 Yes 0 0 No -20 0.86 Yes 50 82.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62351528 + NM_001083113 ZGPAT 1 0.31 0.35 21 9.94 87.64 19 5.63 Yes 35 0.75 No 0 0 No -32 0.45 No 38 52.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 62365996 + NM_001083113 ZGPAT 1 5.71 2.53 60 9.67 85.25 57 8.29 Yes 44 0.1 No 25 0.72 Yes -21 0.73 Yes 42 52.75 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr4 113462108 - NM_018392 ZGRF1 1 1.58 0.22 15 0.66 0 30 5.65 Yes 76 0.39 No 0 0 No -30 0.55 No 45 70.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 113483407 - NM_018392 ZGRF1 1 1.17 0.24 7 5.7 88.07 21 6.64 Yes 0 0.58 No 0 0 No -24 0.6 No 47 52.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 113484035 - NM_018392 ZGRF1 1 0.42 0.18 13 2.15 74.28 45 5.55 No 18 1.23 Yes 0 0 No -30 0.58 No 26 75.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 113507389 - NM_018392 ZGRF1 1 1.25 0.36 21 4.52 0 29 6.74 Yes 65 1.49 Yes 0 0 No -26 0.7 Yes 44 68.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 113529094 - NM_018392 ZGRF1 1 8.12 1.58 57 11.34 94.82 28 7.35 Yes 15 1.38 Yes 27 0.86 Yes -28 0.71 Yes 43 80.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 113529094 - NM_018392 ZGRF1 1 3.88 0.76 33 11.34 94.82 28 7.35 Yes 15 1.38 Yes 27 0.86 Yes -28 0.71 Yes 43 80.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr4 113529774 - NM_018392 ZGRF1 1 0.4 0.1 7 11.66 88.57 32 4.35 No 51 0.82 Yes 0 0 No -24 0.43 No 46 44.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 113532176 - NM_018392 ZGRF1 1 0.63 0.14 8 6.67 87.53 34 8.92 Yes 21 1.27 Yes 27 0.77 Yes -36 0.38 No 34 45.09 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 113550008 - NM_018392 ZGRF1 1 2.71 1.1 44 10.76 82.97 49 6.15 Yes 36 1.63 Yes 33 0.65 Yes -36 0.55 No 34 52.05 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr4 113551172 - NM_018392 ZGRF1 1 1.91 0.72 35 10.91 87.44 27 5.74 Yes 14 1.32 Yes 26 0.91 Yes -26 0.86 Yes 44 93.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 123795124 + NM_014943 ZHX2 1 1.08 0.17 10 6.61 82.08 20 5.36 No 47 0.98 Yes 0 0 No -19 0.67 Yes 51 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 123819959 + NM_014943 ZHX2 1 1.75 0.29 17 7.97 90.59 29 6.52 Yes 16 2.07 Yes 0 0 No -22 0.76 Yes 48 69.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 123863840 + NM_014943 ZHX2 1 0.97 0.15 11 10.14 95.76 26 5.32 No 13 0.08 No 0 0 No -25 0.76 Yes 45 80.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 123885678 + NM_014943 ZHX2 1 31.72 5.17 70 9.32 81.37 23 7 Yes 71 1.29 Yes 0 0 No -24 0.67 Yes 40 66.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 123913025 + NM_014943 ZHX2 1 0.71 0.13 7 9.26 94.44 22 6.24 Yes 9 1.54 Yes 0 0 No -21 0.89 Yes 49 93.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 123945694 + NM_014943 ZHX2 1 1.66 0.21 14 10.54 94.03 27 5.33 No 35 0.95 Yes 0 0 No -26 0.89 Yes 44 91.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 39830025 - NM_015035 ZHX3 1 20.57 1.32 46 8.92 85.76 26 5.57 Yes -3 0.7 No 25 0.77 Yes -25 0.79 Yes 45 91.58 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 39842540 - NM_015035 ZHX3 1 2.73 0.24 12 3.84 87.43 32 7.19 Yes 19 1.6 Yes 27 0.85 Yes -27 0.6 No 43 71.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 39867437 - NM_015035 ZHX3 1 1.67 0.15 8 10.01 78.95 35 6.16 Yes 52 0.73 No 26 0.8 Yes -26 0.53 No 44 70.82 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 39896253 - NM_015035 ZHX3 1 6.87 0.6 26 9.21 85.24 29 9.54 Yes 16 1 Yes 28 0.73 Yes -28 0.81 Yes 42 87.67 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 99628473 + NM_001346581 ZKSCAN1 1 3.2 1.79 59 6.55 67.96 48 7.15 Yes NA NA NA 0 0 No -44 0.46 No 26 66.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99628578 + NM_001346581 ZKSCAN1 1 0.17 0.11 8 2.74 77.63 20 6.15 Yes 1 0.67 No 0 0 No -20 0.84 Yes 50 63.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 28328280 + NM_001242894 ZKSCAN3 1 3.67 0.14 8 4.14 76.85 25 5.08 No 40 1.92 Yes 0 0 No -25 0.54 No 45 67.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 99104200 + NM_001318083 ZKSCAN5 1 2.78 0.69 36 7.57 72.2 27 6.38 Yes 52 1 Yes 0 0 No -30 0.88 Yes 40 82.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 28119639 + NM_001278121 ZKSCAN8 1 0.48 0.28 17 3.84 87.05 20 5.09 No 7 0.91 Yes 0 0 No -42 0.7 Yes 28 73.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 140083504 + NM_144723 ZMAT2 1 0.17 0.4 22 -7.61 0 29 5.48 No 16 0.63 No 0 0 No -28 0.83 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 178743014 - NM_022470 ZMAT3 1 184.98 268.51 72 8.81 93.22 44 6.75 Yes 36 0.32 No 28 0.51 Yes -26 0.5 No 44 48.66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr3 178745608 - NM_022470 ZMAT3 1 0.05 0.14 8 1.7 0 25 7.28 Yes 12 1.24 Yes 31 0.85 Yes -24 0.86 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 178789236 - NM_022470 ZMAT3 1 8.81 9.31 71 6.46 96.03 20 4.77 No 31 0.2 No 19 0.8 Yes -19 0.84 Yes 51 82.58 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr22 30150853 - NM_001318129 ZMAT5 1 22.86 2.72 66 4.17 0 37 5.98 Yes 50 1.19 Yes 29 0.32 Yes -29 0.63 No 41 73.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 30150857 - NM_001318129 ZMAT5 1 1.54 0.19 14 1.46 82.92 33 5.64 Yes 46 1.19 Yes 29 0.32 Yes -25 0.6 No 45 71.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 80921812 + NM_020338 ZMIZ1 1 6.32 0.57 28 5.32 87.83 24 6.32 Yes 11 2.59 Yes 0 0 No -23 0.84 Yes 47 92.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 81049738 + NM_020338 ZMIZ1 1 0.23 0.15 10 8.54 88.82 26 5.19 No 25 0.87 Yes 0 0 No -25 0.48 No 50 51.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 81053119 + NM_020338 ZMIZ1 1 1.31 0.17 9 9.63 82.56 30 9.92 Yes 34 0.06 No 29 0.73 Yes -34 0.63 No 36 74.27 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 81053119 + NM_020338 ZMIZ1 1 130.94 31.54 72 9.63 82.56 30 9.92 Yes 34 0.06 No 29 0.73 Yes -34 0.63 No 36 74.27 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 44796005 + NM_174929 ZMIZ2 1 0.09 0.17 9 -3.56 0 14 4 No 1 1.07 Yes 20 0.96 Yes -13 0.83 Yes 57 76.57 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 44796008 + NM_174929 ZMIZ2 1 0.36 0.74 25 -3.9 0 17 4.36 No 4 0.9 Yes 20 0.96 Yes -16 0.85 Yes 54 61.57 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 44796476 + NM_174929 ZMIZ2 1 0.06 0.11 7 5.69 77.68 26 5 No NA NA NA 0 0 No -25 0.47 No 52 42.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 44796641 + NM_174929 ZMIZ2 1 7.22 13.19 72 8.03 79.65 13 5.57 Yes 0 1.61 Yes 24 0.63 Yes -24 0.58 No 46 62.89 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 44801020 + NM_174929 ZMIZ2 1 4.54 10.43 72 -2.16 63.56 31 5.66 Yes 22 -1.84 No 24 0.97 Yes -30 0.9 Yes 40 87.91 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 44801051 + NM_174929 ZMIZ2 1 0.17 0.4 19 -2.8 0 29 5.39 No 16 0.43 No 0 0 No -28 0.95 Yes 42 92.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 44801157 + NM_174929 ZMIZ2 1 0.24 0.56 30 3.92 80.14 19 4.42 No 69 2.1 Yes 0 0 No -19 0.81 Yes 51 77.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44801255 + NM_174929 ZMIZ2 1 0.05 0.14 10 8.58 84.49 33 5.97 Yes 26 1.46 Yes 18 0.17 Yes -38 0.53 No 41 58.44 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 44802859 + NM_174929 ZMIZ2 1 0.26 0.61 29 -4.65 0 31 5.28 No 48 1.16 Yes 0 0 No -30 0.86 Yes 40 92.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44802969 + NM_174929 ZMIZ2 1 0.51 1.19 47 8 86.64 24 5.39 No 11 1.08 Yes 0 0 No -23 0.83 Yes 47 79.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44804543 + NM_174929 ZMIZ2 1 0.12 0.21 12 -3.73 0 31 6.08 Yes 18 1.45 Yes 0 0 No -30 0.9 Yes 40 92.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44805565 + NM_174929 ZMIZ2 1 15.93 7.18 72 5.2 81.09 24 4.8 No 11 0.8 Yes 0 0 No -24 0.55 No 47 47.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 44805820 + NM_174929 ZMIZ2 1 0.34 0.15 9 2.18 70.96 26 5.66 Yes 73 1.64 Yes 0 0 No -25 0.87 Yes 45 84.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 44805889 + NM_174929 ZMIZ2 1 0.45 0.24 14 3.38 74.06 14 4.8 No 1 0.62 No 0 0 No -22 0.63 No 48 35.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 40725021 + NM_005857 ZMPSTE24 1 0.32 0.49 25 7.57 82.01 49 7.05 Yes 36 1.57 Yes 26 0.82 Yes -37 0.55 No 44 53.85 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 40728442 + NM_005857 ZMPSTE24 1 0.6 0.75 33 10.8 90.54 27 5.74 Yes 14 0.86 Yes 0 0 No -26 0.7 Yes 44 51.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 40728505 + NM_005857 ZMPSTE24 1 1.63 2.44 59 9.18 86.87 25 7.22 Yes 12 1.77 Yes 24 0.94 Yes -24 0.64 No 46 86.75 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 40733476 + NM_005857 ZMPSTE24 1 0.07 0.11 7 1.03 86.15 17 5.14 No 31 0.29 No 0 0 No -23 0.63 No 47 72.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 40745791 + NM_005857 ZMPSTE24 1 0.89 1.63 57 7.1 87.77 24 5.18 No -2 1.05 Yes 0 0 No -23 0.97 Yes 47 98.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 40747036 + NM_005857 ZMPSTE24 1 0.23 0.42 23 8.12 82.64 17 5.56 Yes 4 1.16 Yes 0 0 No -24 0.46 No 46 79.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 40756576 + NM_005857 ZMPSTE24 1 0.08 0.13 8 0.4 69.79 49 7.75 Yes 68 0.82 Yes 0 0 No -51 0.47 No 19 51.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 20539359 + NM_001190965 ZMYM2 1 3.35 1.39 49 6.62 85.89 25 5.56 Yes 42 0.96 Yes 0 0 No -28 0.59 No 42 59.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 20543970 + NM_001190965 ZMYM2 1 0.32 0.13 8 8.99 81.81 25 8.18 Yes 37 2.15 Yes 0 0 No -24 0.63 No 46 80.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 20544164 + NM_001190965 ZMYM2 1 38.4 16.31 72 8.15 89.94 25 5.1 No 12 0.82 Yes 24 0.83 Yes -24 0.77 Yes 46 66.46 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 20578415 + NM_001190965 ZMYM2 1 0.1 0.1 7 2.73 83.78 30 6 Yes 17 0.24 No 0 0 No -29 0.69 Yes 41 87.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 20579215 + NM_001190965 ZMYM2 1 0.4 0.35 23 -5.3 79.79 61 7.38 Yes 48 1.26 Yes 0 0 No -24 0.73 Yes 46 78.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20593690 + NM_001190965 ZMYM2 1 0.29 0.25 16 1.67 0 19 3.79 No 65 0.79 Yes 0 0 No -31 0.66 Yes 39 88.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20599365 + NM_001190965 ZMYM2 1 0.22 0.17 10 6.48 77.38 20 5.88 Yes 65 1.29 Yes 0 0 No -19 0.5 No 51 60.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 20602124 + NM_001190965 ZMYM2 1 1.78 1.63 54 5.59 76.55 25 6.03 Yes 12 0.24 No 24 0.9 Yes -24 0.76 Yes 46 80.79 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr13 20607882 + NM_001190965 ZMYM2 1 0.35 0.24 15 6.22 79.57 18 6.46 Yes 5 1.08 Yes 0 0 No -17 0.49 No 46 39.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 20633869 + NM_001190965 ZMYM2 1 1.72 1.93 60 6.38 87.46 48 9.32 Yes 35 0.35 No 0 0 No -24 0.62 No 46 51.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 20635749 + NM_001190965 ZMYM2 1 0.54 0.39 24 11.61 87.82 39 6.24 Yes 32 1.25 Yes 0 0 No -38 0.49 No 32 73.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 20639173 + NM_001190965 ZMYM2 1 2.44 1.88 62 10.83 84.89 22 5.24 No 22 0.02 No 0 0 No -28 0.58 No 42 78.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 20639633 + NM_001190965 ZMYM2 1 0.16 0.13 7 4.26 70.58 23 8.07 Yes 74 -5.63 No 0 0 No -32 0.82 Yes 38 86.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 20641423 + NM_001190965 ZMYM2 1 0.34 0.33 20 7.83 80.53 29 5.5 No 63 0.82 Yes 0 0 No -28 0.78 Yes 42 80.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20642223 + NM_001190965 ZMYM2 1 0.63 0.46 27 11.61 89.65 29 6.8 Yes 16 0.76 No 34 0.88 Yes -29 0.65 No 41 70.21 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr13 20645950 + NM_001190965 ZMYM2 1 0.57 0.42 22 9.48 90.11 23 6.99 Yes 10 1.3 Yes 0 0 No -22 0.65 No 48 69.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 20656905 + NM_001190965 ZMYM2 1 0.33 0.33 17 4.68 75.81 35 5.82 Yes 50 1.26 Yes 21 0.81 Yes -21 0.7 Yes 49 67.22 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr13 20657086 + NM_001190965 ZMYM2 1 1.23 1.24 41 6.48 69.84 28 4.52 No 49 0.79 Yes 0 0 No -27 0.81 Yes 43 79.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 20659968 + NM_001190965 ZMYM2 1 0.16 0.18 8 2.32 0 11 3.95 No 26 1.48 Yes 0 0 No -38 0.81 Yes 32 79.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70462153 - NM_201599 ZMYM3 1 0.37 0.13 8 4.08 89.12 18 4.86 No 21 1.42 Yes 0 0 No -24 0.83 Yes 46 75.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 70465946 - NM_201599 ZMYM3 1 0.22 0.1 7 -0.26 70.56 28 5.57 Yes 15 0.4 No 0 0 No -27 0.91 Yes 43 83.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 70471101 - NM_201599 ZMYM3 1 0.31 0.14 7 2.93 76.63 29 5.92 Yes 16 0.19 No 28 0.88 Yes -28 0.91 Yes 42 94.74 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 35738498 + NM_005095 ZMYM4 1 0.91 0.13 9 6.15 81.99 24 7.42 Yes 11 1.35 Yes 0 0 No -23 0.94 Yes 47 94.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35750273 + NM_005095 ZMYM4 1 21.05 3.33 69 8.64 95.27 29 6.29 Yes 75 -4.4 No 0 0 No -29 0.62 No 41 66.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 35758626 + NM_005095 ZMYM4 1 1.24 0.17 12 5.6 0 25 7.32 Yes 12 1.53 Yes 0 0 No -24 0.65 No 46 66.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 35761527 + NM_005095 ZMYM4 1 98.87 15.43 72 9.42 87.24 26 6.14 Yes 13 0.82 Yes 25 0.68 Yes -25 0.62 No 45 75.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 35771164 + NM_005095 ZMYM4 1 1.64 0.21 12 11.26 87.15 39 6.77 Yes 26 1.49 Yes 0 0 No -24 0.64 No 37 57.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 35819846 + NM_005095 ZMYM4 1 0.86 0.67 37 9.01 90.2 23 5.63 Yes 56 -2 No 0 0 No -23 0.5 No 47 60.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 35822251 + NM_005095 ZMYM4 1 0.36 0.32 15 9.11 85.04 23 9.47 Yes 22 1.6 Yes 0 0 No -22 0.76 Yes 48 75.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35825196 + NM_005095 ZMYM4 1 0.45 0.64 29 10.93 92.65 43 6.07 Yes 24 1.12 Yes 0 0 No -42 0.53 No 42 67.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 35826565 + NM_005095 ZMYM4 1 0.18 0.25 14 13.68 92.63 23 6.24 Yes 10 0.8 Yes 0 0 No -22 0.67 Yes 48 59.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 35827791 + NM_005095 ZMYM4 1 0.79 0.79 40 7.18 85.67 13 5.63 Yes 67 -4.44 No 0 0 No -23 0.8 Yes 47 84.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 35833854 + NM_005095 ZMYM4 1 0.3 0.29 14 10.25 86.85 30 6.31 Yes 53 -2.44 No 0 0 No -29 0.69 Yes 41 76.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 35835632 + NM_005095 ZMYM4 1 0.2 0.18 11 -13.48 69.12 27 6.04 Yes 42 -1.03 No 0 0 No -26 0.81 Yes 44 80.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 35852685 + NM_005095 ZMYM4 1 0.36 0.35 20 3.11 0 20 4.46 No 1 0.44 No 0 0 No -19 0.84 Yes 51 81.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 35858253 + NM_005095 ZMYM4 1 0.33 0.33 21 -3.04 0 15 3.85 No 19 0.84 Yes 23 0.86 Yes -31 0.66 Yes 39 62.4 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 35862155 + NM_005095 ZMYM4 1 0.99 1.08 47 -2.32 69.9 45 7.8 Yes 32 2.35 Yes 41 0.74 Yes -44 0.88 Yes 26 94.58 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 35862652 + NM_005095 ZMYM4 1 0.35 0.42 23 7.59 97.24 23 5.66 Yes 40 0.68 No 22 0.8 Yes -22 0.66 No 48 51.75 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 35869850 + NM_005095 ZMYM4 1 0.17 0.14 10 6.88 85.67 20 7.14 Yes 7 1.22 Yes 0 0 No -19 0.78 Yes 51 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35873587 + NM_005095 ZMYM4 1 0.23 0.14 8 3.45 0 17 4.57 No 42 0.35 No 23 0.84 Yes -38 0.48 No 32 58.15 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 35873622 + NM_005095 ZMYM4 1 0.52 0.26 14 1.06 72.16 19 4.8 No 32 0.45 No 0 0 No -44 0.72 Yes 26 62.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 20419075 - NM_001142684 ZMYM5 1 2.05 0.46 28 9.13 91.2 45 7.03 Yes 32 0.42 No 0 0 No -26 0.39 No 44 55.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 35453154 - NM_007167 ZMYM6 1 1.17 0.49 30 3.45 78.64 46 6.05 Yes 27 0.84 Yes 0 0 No -26 0.73 Yes 31 62.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 35454026 - NM_007167 ZMYM6 1 0.8 0.32 18 3.88 74.5 39 7.38 Yes 7 0.17 No 0 0 No -19 0.69 Yes 38 35.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 35455913 - NM_007167 ZMYM6 1 4.4 1.71 49 3.58 80.12 24 5.92 Yes 11 1.15 Yes 23 0.8 Yes -23 0.85 Yes 47 89.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 35455916 - NM_007167 ZMYM6 1 3.79 1.54 51 6.91 85.02 21 5.66 Yes 8 1.17 Yes 23 0.8 Yes -20 0.78 Yes 50 85.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 35457938 - NM_007167 ZMYM6 1 0.35 0.18 10 5.83 79.97 28 6.63 Yes 56 0.88 Yes 0 0 No -30 0.76 Yes 40 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35457984 - NM_007167 ZMYM6 1 0.18 0.1 7 -4.87 0 47 6.29 Yes 10 0.86 Yes 0 0 No -46 0.76 Yes 24 78.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35470632 - NM_007167 ZMYM6 1 0.68 0.38 19 5.41 90.92 26 4.25 No 3 0.8 Yes 0 0 No -25 0.85 Yes 45 78.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35470859 - NM_007167 ZMYM6 1 1.21 0.69 33 0.12 68.61 21 4.68 No 21 1.02 Yes 0 0 No -20 0.7 Yes 50 67.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 35478341 - NM_007167 ZMYM6 1 1.82 1.04 41 3.58 76.37 28 5.8 Yes 24 1.49 Yes 0 0 No -27 0.75 Yes 34 80.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 35485199 - NM_007167 ZMYM6 1 0.14 0.14 9 -3.04 0 32 5.57 Yes 19 1.26 Yes 0 0 No -31 0.44 No 39 71.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 35492571 - NM_007167 ZMYM6 1 0.4 0.21 11 8.46 86.1 39 6.03 Yes 51 0.9 Yes 0 0 No -26 0.58 No 44 50.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 243850 + NM_001202468 ZMYND11 1 0.48 0.33 16 9.24 87.79 33 5.89 Yes 53 0.34 No 20 0.76 Yes -20 0.74 Yes 50 83.81 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 257584 + NM_001202468 ZMYND11 1 0.19 0.11 7 4.48 69.5 37 7.01 Yes 33 1.14 Yes 0 0 No -36 0.52 No 25 69.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 285998 + NM_001202468 ZMYND11 1 3.94 2.57 63 3.23 80.3 24 5.6 Yes 50 0.8 Yes 27 0.94 Yes -30 0.91 Yes 40 96.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 140482014 - NM_138462 ZMYND19 1 1.39 0.9 39 3.23 69.62 31 6.4 Yes -4 1.49 Yes 0 0 No -30 0.56 No 34 70.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 140484025 - NM_138462 ZMYND19 1 0.72 0.19 11 0.39 73.32 53 7.64 Yes 53 1.43 Yes 0 0 No -27 0.87 Yes 18 81.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 140484151 - NM_138462 ZMYND19 1 1.44 0.47 26 3.23 83.35 23 5.38 No -2 0.43 No 0 0 No -22 0.9 Yes 48 75.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 45841371 - NM_001281772 ZMYND8 1 111.78 31.33 72 8.49 86.45 25 5.57 Yes 22 0.5 No 24 0.79 Yes -24 0.89 Yes 46 88.51 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 45841371 - NM_001281772 ZMYND8 1 1.61 0.4 26 8.49 86.45 25 5.57 Yes 22 0.5 No 24 0.79 Yes -24 0.89 Yes 46 88.51 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 45850109 - NM_001281772 ZMYND8 1 0.16 0.11 7 3.73 87.37 16 4.53 No 59 -0.93 No 0 0 No -49 0.83 Yes 21 81.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 45853408 - NM_001281772 ZMYND8 1 0.24 0.26 15 8.97 87.01 18 6.72 Yes 5 0.95 Yes 0 0 No -31 0.47 No 53 72.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 45867877 - NM_001281772 ZMYND8 1 0.77 0.68 32 -0.7 0 9 3.87 No 39 0.76 No 0 0 No -47 0.41 No 23 68.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 45868141 - NM_001281772 ZMYND8 1 0.17 0.14 10 9.5 79.75 13 6.24 Yes 0 1 Yes 0 0 No -32 0.5 No 49 58.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 45872470 - NM_001281772 ZMYND8 1 0.16 0.15 8 9.84 85.92 29 6.73 Yes 61 0.91 Yes 0 0 No -28 0.75 Yes 42 72.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 45883169 - NM_001281772 ZMYND8 1 1.41 1.1 48 3.77 82.05 34 7.47 Yes 21 2.09 Yes 0 0 No -37 0.68 Yes 33 78.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 45883169 - NM_001281772 ZMYND8 1 0.14 0.13 7 3.77 82.05 34 7.47 Yes 21 2.09 Yes 0 0 No -37 0.68 Yes 33 78.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 45909852 - NM_001281772 ZMYND8 1 0.25 0.25 16 5.04 76.66 31 6.58 Yes 18 1.43 Yes 0 0 No -25 0.51 No 45 57.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 45910960 - NM_001281772 ZMYND8 1 0.47 0.58 25 -1.1 80.22 32 6.15 Yes 44 0.13 No 0 0 No -32 0.43 No 39 43.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr20 45914571 - NM_001281772 ZMYND8 1 1.12 1.04 44 10.41 85.41 37 6.07 Yes 24 1 Yes 0 0 No -36 0.74 Yes 34 69.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr20 45920629 - NM_001281772 ZMYND8 1 0.23 0.28 13 4.01 0 41 7.04 Yes 51 1.42 Yes 0 0 No -40 0.59 No 27 67.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 45925672 - NM_001281772 ZMYND8 1 0.15 0.19 10 4.5 87.46 27 4.41 No 59 1.01 Yes 0 0 No -26 0.62 No 44 60.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 45927688 - NM_001281772 ZMYND8 1 0.81 0.44 26 0.59 0 56 5.69 Yes 67 0.94 Yes 0 0 No -36 0.48 No 40 47.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 45927692 - NM_001281772 ZMYND8 1 107.74 53.96 72 5.75 79.51 52 5.5 No 63 0.95 Yes 0 0 No -32 0.52 No 44 47.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 45938501 - NM_001281772 ZMYND8 1 1.09 0.56 29 11.4 87.41 61 7.74 Yes -2 0.61 No 0 0 No -31 0.59 No 45 73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr12 133727654 + NM_015394 ZNF10 1 2.15 0.17 9 5 76.92 33 5.65 Yes 20 0.88 Yes 26 0.64 Yes -26 0.7 Yes 38 70.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 21915856 - NM_173531 ZNF100 1 0.39 0.15 11 8.37 89.01 31 5.66 Yes 18 0.51 No 0 0 No -30 0.88 Yes 40 93.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 21925467 - NM_173531 ZNF100 1 0.36 0.14 10 9.67 88.11 23 5.74 Yes 10 1.3 Yes 0 0 No -22 0.83 Yes 48 77.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 21926026 - NM_173531 ZNF100 1 1.18 0.46 25 2.14 83.57 34 11.14 Yes 21 1.16 Yes 29 0.77 Yes -29 0.54 No 33 72.82 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 21926915 - NM_173531 ZNF100 1 44.71 14.25 72 2.71 77.78 26 5.98 Yes 13 0.68 No 22 0.88 Yes -25 0.9 Yes 45 89.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 21926915 - NM_173531 ZNF100 1 0.6 0.21 12 2.71 77.78 26 5.98 Yes 13 0.68 No 22 0.88 Yes -25 0.9 Yes 45 89.19 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 19783778 + NM_033204 ZNF101 1 1.39 0.57 30 8.51 88.81 32 5.58 Yes 19 0.71 No 0 0 No -27 0.58 No 43 47.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19785966 + NM_033204 ZNF101 1 0.35 0.11 8 1.7 83 21 6.29 Yes 8 0.55 No 0 0 No -33 0.37 No 37 47.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 19785991 + NM_033204 ZNF101 1 2.6 1.17 46 5.41 90.92 28 4.25 No 3 0.8 Yes 0 0 No -58 0.35 No 12 56.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19789992 + NM_033204 ZNF101 1 0.6 0.39 22 1.1 74.61 29 5.14 No 13 1.02 Yes 0 0 No -28 0.6 No 42 67.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 42731325 - NM_001284307 ZNF106 1 0.37 0.36 21 2.32 79.47 25 5.29 No 47 -4.38 No 0 0 No -24 0.89 Yes 46 81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 42731751 - NM_001284307 ZNF106 1 31.55 28.4 72 6.62 90.94 20 5.1 No 7 0.71 No 19 0.69 Yes -19 0.77 Yes 51 72.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 42738875 - NM_001284307 ZNF106 1 0.18 0.22 12 3.96 79.71 53 8.09 Yes 40 0.92 Yes 24 0.85 Yes -29 0.47 No 41 50.06 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 42744153 - NM_001284307 ZNF106 1 18.05 2.86 67 8.63 94.94 24 7.07 Yes 11 1.42 Yes 23 0.86 Yes -23 0.89 Yes 47 96.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 42744153 - NM_001284307 ZNF106 1 0.69 0.14 9 8.63 94.94 24 7.07 Yes 11 1.42 Yes 23 0.86 Yes -23 0.89 Yes 47 96.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 42749357 - NM_001284307 ZNF106 1 318.99 48.81 72 12.42 82.23 29 4.83 No 6 1.46 Yes 28 0.78 Yes -28 0.78 Yes 42 62.78 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 42749357 - NM_001284307 ZNF106 1 8.5 1.32 51 12.42 82.23 29 4.83 No 6 1.46 Yes 28 0.78 Yes -28 0.78 Yes 42 62.78 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr7 64157030 + NM_016220 ZNF107 1 0.61 0.33 21 8.79 84.1 29 6.24 Yes 16 0.94 Yes 0 0 No -28 0.7 Yes 42 79.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 64157745 + NM_016220 ZNF107 1 0.38 0.26 15 1.46 67.5 32 6.45 Yes 60 -4.75 No 0 0 No -31 0.68 Yes 39 71.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6733341 - NM_006956 ZNF12 1 1.04 0.65 36 6.21 82.98 24 5.06 No 16 0.53 No 0 0 No -23 0.91 Yes 47 84.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6740904 - NM_006956 ZNF12 1 0.54 0.19 12 6.58 87.13 23 5.01 No 45 1.72 Yes 0 0 No -22 0.82 Yes 48 51.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6743943 - NM_006956 ZNF12 1 15.16 4.43 69 9.21 85.05 31 6.84 Yes 18 1.41 Yes 30 0.82 Yes -30 0.84 Yes 40 73.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 9677782 - NM_001008727 ZNF121 1 0.55 0.54 30 -0.55 0 31 6.45 Yes 8 0.76 No 0 0 No -27 0.6 No 40 57.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 9678382 - NM_001008727 ZNF121 1 16.68 18.15 72 6.93 72.33 30 6.32 Yes 17 1.36 Yes 29 0.9 Yes -29 0.85 Yes 41 89.46 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 9678889 - NM_001008727 ZNF121 1 0.62 0.96 43 10.14 92.34 30 6.3 Yes 17 1.73 Yes 39 0.66 Yes -25 0.49 No 45 59.97 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 9695025 - NM_001008727 ZNF121 1 5.42 4.86 71 10.33 92.33 15 6.62 Yes 2 0.85 Yes 28 0.62 Yes -28 0.74 Yes 42 83.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 247323170 - NM_001297569 ZNF124 1 5.05 1.42 46 4.33 76.15 24 5.74 Yes 62 -4.89 No 28 0.34 Yes -20 0.41 No 48 51.8 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 43168031 + NM_001330717 ZNF131 1 0.14 0.1 7 4.58 91.75 26 5.1 No 67 0.06 No 28 0.57 Yes -28 0.44 No 42 71.7 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr5 43174476 + NM_001330717 ZNF131 1 0.15 0.1 7 8.26 95.02 24 5.27 No 11 0.75 No 0 0 No -23 0.35 No 47 57.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr20 18295715 + NM_001283000 ZNF133 1 0.92 0.13 7 6.85 84.96 22 5.63 Yes 9 1.57 Yes 29 0.9 Yes -25 0.73 Yes 45 81.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 18286914 + NM_001283000 ZNF133 1 1.09 0.17 10 -1.89 0 15 4.58 No 67 -4.88 No 33 0.73 Yes -41 0.74 Yes 29 49.13 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 18287349 + NM_001283000 ZNF133 1 2.22 0.25 15 6.49 77.81 58 7.45 Yes 45 1.43 Yes 36 0.38 Yes -42 0.49 No 34 58.41 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 18290812 + NM_001283000 ZNF133 1 2.71 0.36 15 5.47 79.34 21 5.34 No 56 1.03 Yes 20 0.38 Yes -20 0.66 Yes 29 63.67 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr20 18295715 + NM_001283000 ZNF133 1 43.84 5.78 71 6.85 84.96 22 5.63 Yes 9 1.57 Yes 29 0.9 Yes -25 0.73 Yes 45 81.87 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 58130159 + NM_003435 ZNF134 1 1.57 0.28 14 5.81 86.85 34 5.53 No 21 0.96 Yes 27 0.68 Yes -27 0.82 Yes 43 71.26 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12297387 + NM_001348014 ZNF136 1 0.3 0.13 8 -1.31 74.53 26 6 Yes 13 1.31 Yes 0 0 No -29 0.56 No 41 82.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 19826496 - NM_021030 ZNF14 1 1.05 0.17 11 10.76 90.64 24 4.52 No 36 1.38 Yes 0 0 No -27 0.45 No 44 55.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 133660072 + NM_001300778 ZNF140 1 0.95 0.25 16 2.54 0 27 5.48 No 40 1.12 Yes 27 0.73 Yes -52 0.57 No 18 88.71 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr12 133660048 + NM_001300778 ZNF140 1 5.8 1.46 51 1.7 77.45 29 6.02 Yes 54 1.55 Yes 28 0.94 Yes -28 0.87 Yes 42 93.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 133668831 + NM_001300778 ZNF140 1 0.89 0.18 12 4.06 73.1 15 5.74 Yes 2 0.66 No 0 0 No -25 0.52 No 39 61.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 133670000 + NM_001300778 ZNF140 1 2.08 0.47 26 8.82 95.71 18 5.83 Yes 5 0.46 No 27 0.35 Yes -27 0.57 No 43 73.88 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 133682210 + NM_001300778 ZNF140 1 1.03 0.24 13 5.5 81.56 24 4.57 No 11 0.69 No 23 0.95 Yes -23 0.88 Yes 47 89.05 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr4 336080 + NM_003441 ZNF141 1 1.59 0.86 44 8.69 88.57 27 5.38 No 14 0.5 No 0 0 No -26 0.9 Yes 44 81.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 219523525 - NR_073599 ZNF142 1 6.17 2.83 65 11.9 85.96 57 7.53 Yes 5 1.49 Yes 22 0.68 Yes -33 0.39 No 37 65.89 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 219523621 - NR_073599 ZNF142 1 0.63 0.29 19 6.78 75.96 21 5.2 No 63 -2.68 No 23 0.9 Yes -20 0.57 No 50 68.19 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 219523759 - NR_073599 ZNF142 1 24.57 6.92 72 8.8 86.36 16 4.81 No 3 0.6 No 26 0.64 Yes -26 0.68 Yes 44 61.61 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 219523846 - NR_073599 ZNF142 1 3 0.89 40 0.85 0 17 3.14 No 14 0.74 No 0 0 No -26 0.64 No 44 75.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 9485317 + NM_001282657 ZNF143 1 0.55 0.24 13 8.83 89.8 24 4.5 No 74 -2.26 No 23 0.72 Yes -23 0.63 No 47 52.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 9487862 + NM_001282657 ZNF143 1 0.28 0.11 7 4.18 83.78 32 6.63 Yes 19 1.75 Yes 0 0 No -31 0.93 Yes 39 93.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 9492852 + NM_001282657 ZNF143 1 4.28 1.61 56 1.26 0 18 5.34 No 48 1.3 Yes 23 0.47 Yes -49 0.39 No 43 69.64 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 9496099 + NM_001282657 ZNF143 1 51.47 20.89 72 3.21 89.92 25 4.93 No 64 1.4 Yes 21 0.91 Yes -24 0.87 Yes 46 76.53 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 9499940 + NM_001282657 ZNF143 1 0.66 0.36 21 1.98 0 30 5.11 No 71 0.76 No 25 0.77 Yes -29 0.48 No 41 55.81 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 36709027 + NM_007145 ZNF146 1 0.45 0.32 17 -5.4 0 34 6.7 Yes 21 1.3 Yes 0 0 No -33 0.84 Yes 37 94.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36716855 + NM_007145 ZNF146 1 1.55 1.54 53 6.45 87.64 26 7.68 Yes 13 1.22 Yes 0 0 No -25 0.86 Yes 45 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36711798 + NM_007145 ZNF146 1 0.16 0.14 8 7.3 90.21 15 4.54 No 54 1.09 Yes 0 0 No -26 0.58 No 19 60.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36716855 + NM_007145 ZNF146 1 11.2 11.61 72 6.45 87.64 26 7.68 Yes 13 1.22 Yes 0 0 No -25 0.86 Yes 45 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 36725237 + NM_007145 ZNF146 1 0.29 0.69 26 9.29 85.81 34 5.61 Yes 13 1.74 Yes 0 0 No -33 0.54 No 37 62.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36725946 + NM_007145 ZNF146 1 0.07 0.14 8 7.32 81.18 19 6.32 Yes 6 1 Yes 0 0 No -30 0.44 No 52 66.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 36726563 + NM_007145 ZNF146 1 1.21 2.79 64 -1.42 73.97 41 8.71 Yes 28 0.98 Yes 0 0 No -40 0.52 No 30 73.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 36726910 + NM_007145 ZNF146 1 0.04 0.13 9 6.32 83.43 43 5.91 Yes 0 0.71 No 0 0 No -27 0.45 No 43 46.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 124958353 - NM_021964 ZNF148 1 0.15 0.11 8 6.09 79.72 39 5.73 Yes 66 0.28 No 0 0 No -28 0.78 Yes 42 89.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 124991413 - NM_021964 ZNF148 1 0.25 0.21 13 7.18 92.14 28 8.16 Yes 15 0.11 No 0 0 No -27 0.68 Yes 43 69.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 124994998 - NM_021964 ZNF148 1 0.27 0.19 11 7.07 75.61 32 4.87 No 19 0.36 No 0 0 No -31 0.75 Yes 39 70.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125011441 - NM_021964 ZNF148 1 0.08 0.14 7 0.84 74.25 34 5.96 Yes 75 0.5 No 0 0 No -23 0.54 No 47 58.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 125011526 - NM_021964 ZNF148 1 0.3 0.46 27 10.02 89.74 20 7.09 Yes 7 2.62 Yes 0 0 No -25 0.44 No 42 47.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 125016396 - NM_021964 ZNF148 1 0.09 0.15 11 12.09 93.6 26 5.39 No 32 0.87 Yes 0 0 No -25 0.78 Yes 45 80.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 125032497 - NM_021964 ZNF148 1 2.48 4.07 70 0.77 0 41 7.81 Yes 28 0.52 No 0 0 No -40 0.72 Yes 30 73.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 125033878 - NM_021964 ZNF148 1 0.2 0.32 21 6.84 79.13 27 4.94 No 41 1.77 Yes 0 0 No -53 0.5 No 17 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 125033898 - NM_021964 ZNF148 1 9.31 15.15 72 1.97 0 34 6.46 Yes 21 1.77 Yes 33 0.74 Yes -33 0.74 Yes 37 78.05 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 125033902 - NM_021964 ZNF148 1 0.22 0.35 20 -0.14 83.14 30 6.27 Yes 17 1.78 Yes 33 0.74 Yes -29 0.79 Yes 41 72.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 44494175 + NM_001260486 ZNF155 1 2.38 0.19 11 6.84 74.25 27 4.99 No 61 0.67 No 26 0.7 Yes -26 0.65 No 44 75.53 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 53576763 - NM_001322135 ZNF160 1 1.84 0.82 36 1.73 66.09 47 6.85 Yes 34 1.74 Yes 23 0.81 Yes -46 0.48 No 24 73.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 53588472 - NM_001322135 ZNF160 1 1.41 0.31 15 8.15 84.81 18 6.09 Yes 5 1.14 Yes 24 0.75 Yes -24 0.63 No 46 63.84 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 53589363 - NM_001322135 ZNF160 1 3.51 0.88 42 9.2 78.15 22 5.29 No 25 2.27 Yes 21 0.86 Yes -21 0.76 Yes 49 90.39 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 53589382 - NM_001322135 ZNF160 1 2.21 0.56 28 7.59 78.39 19 5.66 Yes 6 2.03 Yes 21 0.86 Yes -18 0.77 Yes 52 60.57 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 53599020 - NM_001322135 ZNF160 1 0.78 0.26 14 8.02 71.12 38 6.13 Yes 10 1.09 Yes 27 0.75 Yes -32 0.63 No 38 66.09 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 53606042 - NM_001322135 ZNF160 1 0.62 0.21 11 6.29 86.6 26 7.42 Yes 63 1.18 Yes 0 0 No -25 0.93 Yes 45 92.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 97057464 + NM_194320 ZNF169 1 2.33 0.13 8 -3.69 51.71 42 6.65 Yes 76 -2.91 No 0 0 No -20 0.21 No 29 19.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 97062093 + NM_194320 ZNF169 1 21.12 1.03 42 3.04 80.04 20 4.69 No 7 1.69 Yes 22 0.96 Yes -19 0.89 Yes 51 93.95 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 3454908 + NM_003450 ZNF174 1 65.06 8.89 72 10.99 88.51 34 6.16 Yes 21 0.57 No 23 0.81 Yes -33 0.72 Yes 37 66.41 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 52084620 + NM_007147 ZNF175 1 1.63 0.36 17 3.77 72.45 59 6.97 Yes -4 0.29 No 27 0.35 Yes -20 0.25 No 47 35.9 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 52085060 + NM_007147 ZNF175 1 0.63 0.18 11 3.81 78.71 26 4.76 No 13 0.28 No 0 0 No -25 0.66 No 45 61.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 52090191 + NM_007147 ZNF175 1 0.89 0.15 9 6.1 90.93 22 4.47 No 69 -2.22 No 0 0 No -21 0.59 No 49 51.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 11881235 - NM_144680 ZNF18 1 0.43 0.11 7 8.59 88.32 34 6.63 Yes 21 1.76 Yes 0 0 No -33 0.38 No 37 80.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 11886722 - NM_144680 ZNF18 1 55.75 7.64 72 7.55 90.46 37 6.22 Yes 45 0.63 No 33 0.89 Yes -26 0.54 No 44 62.02 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 11887509 - NM_144680 ZNF18 1 0.59 0.11 7 -0.14 0 9 3.87 No 29 0.15 No 35 0.66 Yes -31 0.61 No 29 76.06 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 11892469 - NM_144680 ZNF18 1 3.85 0.44 25 4.19 0 26 7.55 Yes 13 1.41 Yes 0 0 No -25 0.91 Yes 45 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44983697 - NM_001288760 ZNF180 1 10.68 1.99 54 6.49 86.88 28 6.18 Yes 15 0.87 Yes 27 0.84 Yes -27 0.72 Yes 43 86.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 44983835 - NM_001288760 ZNF180 1 0.77 0.15 10 -6.02 76.5 22 4.73 No 57 0.41 No 0 0 No -21 0.85 Yes 49 67.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 47863097 - NM_006962 ZNF182 1 3.48 0.36 20 2.51 0 32 4.59 No 19 0.68 No 0 0 No -31 0.6 No 39 63.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 27424730 - NR_144687 ZNF184 1 0.98 0.33 18 9.37 89.35 26 5.78 Yes 13 1.03 Yes 36 0.72 Yes -25 0.85 Yes 45 70.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 104161797 + NM_197977 ZNF189 1 1.88 0.15 9 7.41 80.02 33 7.15 Yes 20 1.68 Yes 0 0 No -32 0.95 Yes 38 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 104162165 + NM_197977 ZNF189 1 79.07 4.58 72 4.31 88.2 25 5.1 No 64 0.63 No 24 0.97 Yes -24 0.9 Yes 46 90.48 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 104162210 + NM_197977 ZNF189 1 23.12 1.51 52 -7.47 83.86 37 6 Yes 24 0.91 Yes 0 0 No -36 0.53 No 34 79.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 104162165 + NM_197977 ZNF189 1 23.99 1.53 53 4.31 88.2 25 5.1 No 64 0.63 No 24 0.97 Yes -24 0.9 Yes 46 90.48 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr9 104162210 + NM_197977 ZNF189 1 19.08 1.06 45 -7.47 83.86 37 6 Yes 24 0.91 Yes 0 0 No -36 0.53 No 34 79.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 104169520 + NM_197977 ZNF189 1 5.1 1.61 57 4.37 86.41 65 9.04 Yes 8 0.65 No 0 0 No -25 0.6 No 49 47.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 104169693 + NM_197977 ZNF189 1 3.97 1.31 56 3.58 0 29 5.14 No 29 0.63 No 0 0 No -41 0.64 No 29 78.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 3382019 - NR_040083 ZNF195 1 3.03 1.28 50 6.64 73.38 33 6.08 Yes 20 0.99 Yes 32 0.86 Yes -32 0.68 Yes 38 88.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 3383120 - NR_040083 ZNF195 1 51.17 21.46 72 8.6 85.01 22 5.74 Yes 9 1.13 Yes 21 0.81 Yes -21 0.64 No 49 77.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 3383263 - NR_040083 ZNF195 1 0.32 0.14 10 4.61 86.51 27 5.29 No 52 1.1 Yes 26 0.9 Yes -26 0.82 Yes 44 72.43 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 3383833 - NR_040083 ZNF195 1 12.65 5.51 71 11.9 84.41 35 6.58 Yes 22 1.31 Yes 24 0.68 Yes -34 0.56 No 36 62.8 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 3388288 - NR_040083 ZNF195 1 1.64 0.72 32 9.26 93.81 27 5.35 No 14 0.54 No 34 0.5 Yes -26 0.44 No 36 54.03 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 3390086 - NR_040083 ZNF195 1 0.59 0.25 14 8.75 96.82 25 7.3 Yes 57 0.28 No 24 0.91 Yes -24 0.88 Yes 46 72.85 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 3390733 - NR_040083 ZNF195 1 6.68 2.9 64 7.04 88.32 22 5.86 Yes 64 0.97 Yes 26 0.73 Yes -26 0.79 Yes 44 69.2 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr3 44670565 + NM_001323293 ZNF197 1 205.11 13.39 72 1.03 0 12 4.24 No 19 0.89 Yes 22 0.9 Yes -31 0.75 Yes 39 74.53 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 44672305 + NM_001323293 ZNF197 1 11.92 3.42 69 6.06 75.8 45 6.14 Yes 0 1.55 Yes 34 0.84 Yes -34 0.28 No 29 50.69 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 44687982 + NM_001323293 ZNF197 1 10.04 4.88 68 5.25 79.08 28 5.37 No 67 0.28 No 27 0.88 Yes -27 0.8 Yes 43 88.73 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 12249234 - NM_021143 ZNF20 1 3.66 0.26 15 3.87 88.84 27 5.2 No 55 0 No 0 0 No -26 0.75 Yes 44 65.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 3274611 - NM_003454 ZNF200 1 63.39 9.53 72 6.35 87.64 23 5.97 Yes 57 1.62 Yes 30 0.67 Yes -33 0.62 No 37 79.72 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr16 3276785 - NM_003454 ZNF200 1 1.05 0.15 9 9.57 92.84 27 7.06 Yes 14 1.42 Yes 0 0 No -23 0.4 No 43 63.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 3282545 - NM_003454 ZNF200 1 1.44 0.5 26 -8.81 73.93 32 5.13 No 75 1.06 Yes 23 0.74 Yes -31 0.73 Yes 39 69.93 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 123597697 - NM_001301819 ZNF202 1 1.42 0.36 22 -9 75.06 34 6.63 Yes 21 2.14 Yes 0 0 No -33 0.72 Yes 37 80.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30678857 + NM_001098507 ZNF207 1 0.03 0.18 12 -6.52 0 17 4.28 No 18 0.05 No 0 0 No -16 0.72 Yes 45 29.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 30687617 + NM_001098507 ZNF207 1 0.03 0.24 16 -14.57 0 20 6.8 Yes 37 0.64 No 0 0 No -28 0.62 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 30687952 + NM_001098507 ZNF207 1 0.31 2.07 61 6.89 85.87 29 5.48 No 76 1.61 Yes 0 0 No -28 0.95 Yes 42 93.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 30694775 + NM_001098507 ZNF207 1 0.08 0.24 11 -1.16 72.7 18 4.8 No 56 1.33 Yes 21 0.9 Yes -26 0.6 No 40 43.13 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 30696317 + NM_001098507 ZNF207 1 0.12 0.72 38 -2.82 0 19 5.4 No 39 0.78 Yes 0 0 No -30 0.95 Yes 40 94.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58151279 + NR_049753 ZNF211 1 14.42 2.58 56 12.12 85.91 23 6.08 Yes 10 1.43 Yes 22 0.9 Yes -22 0.96 Yes 48 97.24 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 58151349 + NR_049753 ZNF211 1 0.68 0.14 10 10.31 94.15 28 5.29 No 25 0.11 No 0 0 No -27 0.27 No 43 28.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148942782 + NM_012256 ZNF212 1 0.99 0.14 10 8.76 86.24 21 7.2 Yes 8 1.24 Yes 0 0 No -20 0.76 Yes 50 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 148946439 + NM_012256 ZNF212 1 0.74 0.11 8 -4.66 69.12 27 5.74 Yes 14 0.46 No 0 0 No -26 0.81 Yes 44 86.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 148947254 + NM_012256 ZNF212 1 2.19 0.31 19 0.75 0 35 4.78 No 16 1.89 Yes 23 0.85 Yes -28 0.85 Yes 36 69.86 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 148948300 + NM_012256 ZNF212 1 1.98 0.42 23 3.09 0 42 7.79 Yes 42 1.94 Yes 32 0.78 Yes -41 0.5 No 29 59.08 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 148950652 + NM_012256 ZNF212 1 5.14 1.03 49 6.39 82.77 36 7.07 Yes 23 1.02 Yes 0 0 No -35 0.86 Yes 35 85.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3188354 + NM_001134655 ZNF213 1 9.47 1.1 42 10.08 92.06 29 4.46 No 10 0.6 No 28 0.91 Yes -28 0.71 Yes 42 76.42 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 3188932 + NM_001134655 ZNF213 1 1.7 0.14 9 7.57 80.63 21 6.55 Yes 8 2.09 Yes 26 0.94 Yes -25 0.81 Yes 45 76.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 3190636 + NM_001134655 ZNF213 1 2.43 0.31 17 7.82 82.71 25 5.57 Yes 38 0.61 No 0 0 No -24 0.75 Yes 46 81.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 6953332 + NM_013250 ZNF215 1 0.94 0.25 12 1.55 0 11 4.12 No 39 1.25 Yes 0 0 No -26 0.73 Yes 44 68.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 6953599 + NM_013250 ZNF215 1 1.24 0.26 18 0.31 78.9 22 4.8 No 26 -2.47 No 0 0 No -21 0.91 Yes 49 62.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 6972448 + NM_013250 ZNF215 1 0.75 0.17 11 8.85 88.97 32 7.18 Yes 19 1.13 Yes 0 0 No -31 0.88 Yes 39 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 52193778 - NM_006526 ZNF217 1 0.2 0.32 19 3.98 73.52 40 7.05 Yes 51 0.15 No 0 0 No -27 0.3 No 40 39.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 44469423 + NM_013359 ZNF221 1 1.89 0.14 8 5.34 84.37 21 4.85 No 42 0.42 No 0 0 No -24 0.7 Yes 46 80.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 44530177 + NM_001129996 ZNF222 1 11.44 1.17 41 8.56 90.19 21 5 No 45 0.7 No 0 0 No -20 0.91 Yes 50 97.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 44535092 + NM_001129996 ZNF222 1 1.17 0.11 8 5.18 85.83 20 4.17 No 76 1.8 Yes 23 0.69 Yes -23 0.69 Yes 47 59.89 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 44599107 + NM_001321645 ZNF224 1 0.98 0.13 7 10.35 89.93 40 6.29 Yes -2 0.77 Yes 0 0 No -33 0.84 Yes 37 88.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44618201 + NM_013362 ZNF225 1 6.96 0.71 32 12.56 81.96 14 6.47 Yes 1 2.22 Yes 30 0.8 Yes -30 0.59 No 40 76.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 44623519 + NM_013362 ZNF225 1 4.61 0.47 23 10.01 89.45 35 6.95 Yes 22 0.74 No 0 0 No -20 0.56 No 50 56.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 44633194 + NM_013362 ZNF225 1 1.26 0.14 9 9.28 91.06 35 4.42 No 75 0.89 Yes 34 0.86 Yes -34 0.93 Yes 36 94.79 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 44670857 + NM_001032372 ZNF226 1 4.78 1.19 48 7.38 87.12 33 6.15 Yes 61 -2.23 No 32 0.6 Yes -32 0.61 No 38 89.08 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 44671971 + NM_001032372 ZNF226 1 2.31 0.61 30 7.72 79.55 25 6.7 Yes 12 1 Yes 24 0.87 Yes -24 0.61 No 46 71.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 44673717 + NM_001032372 ZNF226 1 2.04 0.54 25 7.09 86.76 31 5.42 No 58 0.36 No 25 0.55 Yes -28 0.38 No 42 43.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 44674192 + NM_001032372 ZNF226 1 3.07 0.94 33 5.17 0 41 5.28 No 28 0.92 Yes 22 0.79 Yes -40 0.66 Yes 30 78.82 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 44676244 + NM_001032372 ZNF226 1 0.73 0.32 18 -3.02 0 27 4.74 No 54 0.77 No 22 0.77 Yes -26 0.76 Yes 37 66.39 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 44677604 + NM_001032372 ZNF226 1 1.55 0.5 24 6.75 87.05 87 9.8 Yes 26 1.22 Yes 0 0 No -41 0.34 No 29 63.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44679119 + NM_001032372 ZNF226 1 0.43 0.14 9 2.78 74.85 28 4.67 No 54 0.83 Yes 26 0.26 Yes -28 0.64 No 50 69.01 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 44679136 + NM_001032372 ZNF226 1 64.93 19.49 72 8.44 95.02 20 5.1 No 71 0.83 Yes 26 0.26 Yes -26 0.85 Yes 44 87.77 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 44721140 + NM_001289173 ZNF227 1 0.28 0.15 10 3.01 0 39 6.7 Yes 38 1.19 Yes 0 0 No -38 0.91 Yes 32 91.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44732639 + NM_001289173 ZNF227 1 26.42 6.51 72 8.45 89 33 4.88 No 38 -3 No 26 0.78 Yes -26 0.86 Yes 44 70.52 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 44733885 + NM_001289173 ZNF227 1 847.97 33.57 72 5.13 82.06 28 4.84 No 65 -1.23 No 28 0.83 Yes -22 0.46 No 48 45.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 44733906 + NM_001289173 ZNF227 1 70.19 3 67 8.63 82.83 26 5.48 No 54 -1.04 No 0 0 No -25 0.9 Yes 45 90.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 5009793 - NM_001320953 ZNF232 1 3.39 0.24 13 2.17 0 12 4.24 No 48 0.77 No 0 0 No -23 0.49 No 47 92.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 5009802 - NM_001320953 ZNF232 1 1.72 0.17 9 6.61 81.86 15 5.57 Yes 39 0.78 Yes 27 0.37 Yes -27 0.3 No 46 43.47 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 5009824 - NM_001320953 ZNF232 1 5.1 0.46 23 2.65 0 35 5.34 No 17 0.76 No 27 0.37 Yes -34 0.47 No 36 62.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 5009824 - NM_001320953 ZNF232 1 2.03 0.13 8 2.65 0 35 5.34 No 17 0.76 No 27 0.37 Yes -34 0.47 No 36 62.24 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 5011668 - NM_001320953 ZNF232 1 4.33 0.4 22 8.46 88.37 39 6.63 Yes 4 2 Yes 0 0 No -28 0.76 Yes 42 86.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 5013064 - NM_001320953 ZNF232 1 17.59 1.88 58 6.58 90.26 28 5.35 No 15 1.1 Yes 27 0.92 Yes -27 0.87 Yes 43 89.77 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 5013064 - NM_001320953 ZNF232 1 12.76 1.42 52 6.58 90.26 28 5.35 No 15 1.1 Yes 27 0.92 Yes -27 0.87 Yes 43 89.77 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 5013190 - NM_001320953 ZNF232 1 1.46 0.14 10 -4.09 41.62 13 5.21 No 21 0.5 No 23 0.41 Yes -23 0.37 No 37 35 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 44646323 + NM_006630 ZNF234 1 5.04 0.43 21 10.51 92.19 25 5.1 No 12 1.13 Yes 0 0 No -24 0.93 Yes 46 91.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44653923 + NM_006630 ZNF234 1 1.44 0.25 13 1.13 73.33 30 5.63 Yes 75 -3 No 25 0.94 Yes -25 0.76 Yes 45 83.1 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 44654601 + NM_006630 ZNF234 1 3.78 0.56 29 7.83 84.31 16 5.83 Yes 3 0.41 No 0 0 No -22 0.84 Yes 48 77.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 44655338 + NM_006630 ZNF234 1 1.36 0.31 16 8.14 86.61 43 9.43 Yes 30 1.96 Yes 0 0 No -37 0.48 No 33 85.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 44660249 + NM_006630 ZNF234 1 1.23 0.28 16 7.02 82.62 27 6.12 Yes 70 1.69 Yes 0 0 No -21 0.57 No 49 66.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44660407 + NM_006630 ZNF234 1 3.04 0.61 31 5.24 81.67 22 6.48 Yes 9 1.02 Yes 0 0 No -28 0.58 No 42 63.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 74561577 + NM_001306089 ZNF236 1 2.11 0.22 13 4.76 78.28 34 6.12 Yes 15 0.2 No 0 0 No -27 0.48 No 43 41.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 74567061 + NM_001306089 ZNF236 1 1.31 0.26 12 3.31 85.02 17 5.29 No 4 1.05 Yes 0 0 No -25 0.55 No 45 70.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 74567064 + NM_001306089 ZNF236 1 0.56 0.13 7 1.83 79.69 20 5.57 Yes 7 1.02 Yes 0 0 No -28 0.43 No 42 55.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 74574141 + NM_001306089 ZNF236 1 6.35 1.26 44 9.9 94.37 41 6.51 Yes 72 0.97 Yes 0 0 No -30 0.63 No 30 60.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr18 74592083 + NM_001306089 ZNF236 1 0.37 0.17 7 4.21 83.17 18 4.67 No 65 0.42 No 0 0 No -38 0.8 Yes 32 85.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 74593243 + NM_001306089 ZNF236 1 1.19 0.18 11 -1.55 0 30 5.39 No 17 2.39 Yes 0 0 No -29 0.93 Yes 41 96.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 74593276 + NM_001306089 ZNF236 1 14.05 2.63 62 8.97 83.54 30 5.39 No 50 2.35 Yes 0 0 No -22 0.56 No 48 73.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 74611025 + NM_001306089 ZNF236 1 1.33 0.26 16 3.43 82.68 47 5.78 Yes 62 0.56 No 0 0 No -27 0.88 Yes 43 58.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 74617172 + NM_001306089 ZNF236 1 0.7 0.15 10 6.16 97.49 21 4.03 No 71 0.48 No 0 0 No -20 0.46 No 50 67.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 74621918 + NM_001306089 ZNF236 1 2.33 0.44 27 5.7 72.98 32 7.09 Yes 19 0.59 No 0 0 No -31 0.48 No 39 48.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 74622043 + NM_001306089 ZNF236 1 2.81 0.51 29 8.02 87.66 29 5.28 No 52 0.37 No 0 0 No -22 0.7 Yes 42 61.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr18 74636147 + NM_001306089 ZNF236 1 0.4 0.11 7 6.5 80.89 39 6.02 Yes 71 1.32 Yes 0 0 No -38 0.54 No 32 82.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 74640929 + NM_001306089 ZNF236 1 5.25 1.14 51 -0.39 0 19 4.58 No 6 0.56 No 0 0 No -18 0.91 Yes 52 92.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 74647935 + NM_001306089 ZNF236 1 12.39 2.43 64 6 82.74 22 6.08 Yes 9 1.64 Yes 21 0.85 Yes -21 0.88 Yes 49 91.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr18 74650410 + NM_001306089 ZNF236 1 4.18 0.64 29 10.2 87.02 24 6.23 Yes 11 1.02 Yes 0 0 No -23 0.9 Yes 47 88.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 74667944 + NM_001306089 ZNF236 1 1.32 0.14 10 2.56 0 26 5.98 Yes 73 -3.65 No 0 0 No -25 0.88 Yes 45 91.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr18 32919038 - NM_006965 ZNF24 1 1.03 1.6 51 4.77 72.43 30 7.77 Yes 0 1.18 Yes 29 0.77 Yes -29 0.78 Yes 41 79.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 38142631 - NM_001267597 ZNF248 1 10.4 2.06 58 11.12 85.81 28 5.66 Yes 15 0.47 No 0 0 No -25 0.68 Yes 45 74.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 38242293 - NM_001329652 ZNF25 1 1.5 0.15 10 2.93 74.64 25 5.23 No -4 0.05 No 24 0.9 Yes -24 0.72 Yes 46 71.49 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 38256868 - NM_001329652 ZNF25 1 4.24 0.21 11 5.23 74.03 42 5.2 No 73 0.64 No 35 0.65 Yes -35 0.66 Yes 35 83.08 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 38259286 - NM_001329652 ZNF25 1 10.72 0.53 26 11.32 85.31 24 9.1 Yes 8 0.54 No 0 0 No -20 0.67 Yes 50 75.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 146105844 - NM_021061 ZNF250 1 8.09 0.68 32 8.82 84.64 44 7.4 Yes 54 1.85 Yes 24 0.84 Yes -24 0.78 Yes 46 68.64 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr8 146111706 - NM_021061 ZNF250 1 3.27 0.28 15 11.24 98.6 30 4.37 No 69 0.64 No 0 0 No -29 0.93 Yes 41 96.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 146113196 - NM_021061 ZNF250 1 1.42 0.22 15 2.57 86.16 21 5 No 44 -3.16 No 0 0 No -20 0.83 Yes 50 63.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 146216714 - NR_023392 ZNF252P 1 2.33 0.32 19 9.1 91.26 33 6.24 Yes 30 0.47 No 0 0 No -32 0.86 Yes 38 88.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 146217741 - NR_023392 ZNF252P 1 0.79 0.13 7 3.19 84.41 89 8.86 Yes 76 1.55 Yes 0 0 No -26 0.24 No 44 35.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 19982936 + NM_021047 ZNF253 1 6.4 1 38 8.14 82.78 24 5.8 Yes 11 0.76 No 0 0 No -23 0.74 Yes 47 81.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 19992692 + NM_021047 ZNF253 1 0.84 0.21 12 5.99 76.99 68 5.36 No 11 1.42 Yes 0 0 No -23 0.63 No 47 79.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 19998602 + NM_021047 ZNF253 1 5.8 1.64 48 10.52 88.27 26 5.04 No 20 0.95 Yes 0 0 No -25 0.57 No 45 74.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 20001375 + NM_021047 ZNF253 1 0.3 0.1 7 6.28 80.74 25 5.14 No 2 1.57 Yes 0 0 No -24 0.91 Yes 46 92.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 24290017 + NM_001278662 ZNF254 1 12.24 2.03 60 8.65 80.15 25 4.21 No 1 0.49 No 24 0.91 Yes -24 0.93 Yes 46 95.96 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 24290772 + NM_001278662 ZNF254 1 9.08 1.58 54 5.84 81.47 24 5.97 Yes 11 1 Yes 0 0 No -24 0.58 No 47 66.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 37016252 - NM_001166038 ZNF260 1 1.55 0.4 23 8.43 89.2 29 5.74 Yes 31 0.37 No 0 0 No -28 0.9 Yes 42 81.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 3335719 + NM_005741 ZNF263 1 1.51 0.22 13 8.4 86.01 36 6.79 Yes 35 0.85 Yes 0 0 No -27 0.52 No 29 73.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 3336168 + NM_005741 ZNF263 1 0.28 0.1 7 2.81 93.72 17 4.8 No 12 0.83 Yes 0 0 No -24 0.96 Yes 46 96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3335719 + NM_005741 ZNF263 1 13.31 2.04 65 8.4 86.01 36 6.79 Yes 35 0.85 Yes 0 0 No -27 0.52 No 29 73.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 3338469 + NM_005741 ZNF263 1 0.6 0.24 15 2.32 81.54 22 4.8 No -2 0.36 No 0 0 No -21 0.53 No 49 68.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 57706136 + NM_003417 ZNF264 1 27.06 12.01 72 6.43 86.49 27 6.47 Yes 14 1.66 Yes 26 0.91 Yes -26 0.8 Yes 44 87.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 57717477 + NM_003417 ZNF264 1 0.29 0.15 11 10.63 87.94 16 6.19 Yes 3 1.35 Yes 0 0 No -24 0.67 Yes 46 74.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 57717801 + NM_003417 ZNF264 1 0.21 0.11 7 7.28 85.02 25 6 Yes 12 1.31 Yes 0 0 No -24 0.9 Yes 46 94.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 57722693 + NM_003417 ZNF264 1 0.46 0.25 13 9.47 92.41 35 6.92 Yes 22 1.14 Yes 32 0.93 Yes -34 0.74 Yes 36 76.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 9525393 - NM_006631 ZNF266 1 0.62 0.22 12 -0.3 0 31 7.07 Yes 30 1.35 Yes 0 0 No -30 0.78 Yes 40 74.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 9529844 - NM_006631 ZNF266 1 2.35 1.03 36 7.66 81.62 17 6.51 Yes 52 1.13 Yes 0 0 No -24 0.49 No 46 57.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 9529966 - NM_006631 ZNF266 1 11.22 4.43 71 2.24 0 13 4.36 No 21 1.61 Yes 0 0 No -33 0.97 Yes 37 98.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 9544460 - NM_006631 ZNF266 1 21.77 4.53 71 5.01 87 37 8.19 Yes 24 1.59 Yes 0 0 No -36 0.91 Yes 34 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31901527 + NM_001265588 ZNF267 1 0.44 0.71 33 8.33 79.68 43 6.15 Yes 44 0.91 Yes 26 0.72 Yes -26 0.65 No 44 60.99 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 31906111 + NM_001265588 ZNF267 1 0.11 0.21 11 9.98 87.07 25 5.29 No 51 0.8 Yes 0 0 No -24 0.94 Yes 46 90.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31925019 + NM_001265588 ZNF267 1 0.27 0.44 25 11.76 91.26 27 6.69 Yes 14 1.3 Yes 0 0 No -26 0.94 Yes 44 95.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31925789 + NM_001265588 ZNF267 1 0.07 0.11 8 -3.4 0 26 5.93 Yes 58 0.25 No 32 0.48 Yes -25 0.56 No NA NA NA BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 133768119 + NM_001165882 ZNF268 1 1.41 0.53 26 -2.01 79.41 31 6.89 Yes 18 0.51 No 30 0.72 Yes -30 0.9 Yes 36 80.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 32870965 + NR_024565 ZNF271P 1 0.27 0.14 10 4.12 0 28 5.05 No 15 0.28 No 35 0.4 Yes -25 0.52 No NA NA NA BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr18 32870992 + NR_024565 ZNF271P 1 0.23 0.13 7 2.32 71.07 22 5.29 No 42 0.33 No 0 0 No -27 0.4 No 16 41.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr18 32871037 + NR_024565 ZNF271P 1 1.06 0.43 25 3.82 73.74 14 5.32 No 1 0.94 Yes 0 0 No -22 0.85 Yes 48 81.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 32883227 + NR_024565 ZNF271P 1 0.16 0.14 7 0.97 0 21 4.47 No 75 0.52 No 0 0 No -20 0.81 Yes 50 88.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 64382028 + NR_003099 ZNF273 1 1.44 0.28 12 2.17 0 50 11.04 Yes 37 2.76 Yes 0 0 No -49 0.78 Yes 21 96.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 64383743 + NR_003099 ZNF273 1 0.85 0.15 9 7.72 94.45 71 8.28 Yes 58 1.37 Yes 26 0.78 Yes -57 0.56 No 13 83.97 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr7 64383763 + NR_003099 ZNF273 1 11.69 2.26 59 7.58 91.93 27 4.92 No 2 1.04 Yes 26 0.78 Yes -26 0.73 Yes 44 60.97 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 58710196 + NM_001278734 ZNF274 1 1.22 0.51 26 11.92 88.27 31 6.9 Yes 18 1.55 Yes 0 0 No -30 0.83 Yes 40 85.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58721574 + NM_001278734 ZNF274 1 1.78 0.42 22 -0.51 0 10 4 No 61 0.97 Yes 0 0 No -17 0.44 No 45 22.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 152606271 + NM_001080485 ZNF275 1 0.37 0.14 10 10.59 83.91 39 6.69 Yes 66 1.72 Yes 0 0 No -38 0.87 Yes 32 95.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 152609579 + NM_001080485 ZNF275 1 0.78 0.29 15 8.64 79.62 24 6.48 Yes 11 1.49 Yes 0 0 No -23 0.92 Yes 47 94.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89789686 + NM_001113525 ZNF276 1 13.02 2.81 64 2.57 75.51 12 5.29 No 30 1.6 Yes 21 0.65 Yes -42 0.77 Yes 28 84.04 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89795644 + NM_001113525 ZNF276 1 0.97 0.15 9 -3.14 77.9 25 5.48 No 12 0.81 Yes 0 0 No -24 0.76 Yes 46 84.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 89796131 + NM_001113525 ZNF276 1 1.9 0.67 30 9.6 77.8 33 6.78 Yes 48 -0.28 No 0 0 No -33 0.54 No 38 64.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 89796338 + NM_001113525 ZNF276 1 10.17 3.67 68 11.62 93.18 23 6.39 Yes 10 0.27 No 0 0 No -22 0.94 Yes 48 95.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 89800331 + NM_001113525 ZNF276 1 1.71 0.63 32 -0.92 72.76 22 4.9 No 9 1.62 Yes 0 0 No -21 0.95 Yes 49 94.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 111936286 + NM_021994 ZNF277 1 0.36 0.32 16 -1.17 69.3 43 8.59 Yes 30 1.04 Yes 0 0 No -42 0.75 Yes 28 89.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 129381002 - NM_017666 ZNF280C 1 0.66 0.17 11 -4.07 0 14 6.32 Yes 74 0.93 Yes 24 0.67 Yes -35 0.86 Yes 35 94.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 56938628 - NM_017661 ZNF280D 1 0.61 0.21 12 3.19 0 52 7.46 Yes 39 1.1 Yes 0 0 No -34 0.65 No 36 60.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56938628 - NM_017661 ZNF280D 1 0.85 0.25 14 3.19 0 52 7.46 Yes 39 1.1 Yes 0 0 No -34 0.65 No 36 60.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 56945798 - NM_017661 ZNF280D 1 2.23 0.58 26 12.23 93.89 55 7.94 Yes 28 1.05 Yes 26 0.9 Yes -26 0.7 Yes 44 89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 56945798 - NM_017661 ZNF280D 1 1.85 0.51 26 12.23 93.89 55 7.94 Yes 28 1.05 Yes 26 0.9 Yes -26 0.7 Yes 44 89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 56960440 - NM_017661 ZNF280D 1 0.77 0.33 18 5.94 89.72 69 9.44 Yes 4 1.83 Yes 36 0.73 Yes -30 0.69 Yes 40 75.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 56969837 - NM_017661 ZNF280D 1 0.45 0.11 8 5.76 73.53 28 5.24 No 6 0.28 No 0 0 No -34 0.45 No 36 61.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 56999342 - NM_017661 ZNF280D 1 41.31 18.19 72 2.46 0 17 4 No 69 0.08 No 27 0.88 Yes -34 0.52 No 36 71.3 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 57017189 - NM_017661 ZNF280D 1 0.23 0.11 8 9.65 86.4 53 8.46 Yes 40 1.45 Yes 25 0.73 Yes -25 0.5 No 18 76.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr15 57021981 - NM_017661 ZNF280D 1 1.22 0.5 23 12.67 87.42 31 6 Yes 57 1.38 Yes 31 0.44 Yes -33 0.58 No 46 53.8 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 57025073 - NM_017661 ZNF280D 1 0.45 0.21 13 6.55 87.94 26 4.99 No 71 1.16 Yes 0 0 No -27 0.53 No 45 61.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 57025094 - NM_017661 ZNF280D 1 1.07 0.44 22 9.62 75.6 28 5.4 No 50 1.17 Yes 0 0 No -27 0.68 Yes 43 79.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 57025223 - NM_017661 ZNF280D 1 1.27 0.57 28 7.95 84.23 31 5.48 No 18 1.06 Yes 30 0.87 Yes -23 0.46 No 40 73.45 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr7 148903141 + NM_001303481 ZNF282 1 0.64 0.33 19 7.07 84.54 21 4.7 No 8 0.63 No 0 0 No -20 0.55 No 44 41.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148907682 + NM_001303481 ZNF282 1 1.2 0.86 39 -1.79 0 9 3.87 No 9 0.01 No 0 0 No -27 0.66 No 43 67.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148908762 + NM_001303481 ZNF282 1 1.29 0.82 35 8.99 91.46 13 5.2 No 17 0.58 No 0 0 No -29 0.46 No 41 80.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 148909446 + NM_001303481 ZNF282 1 7.83 5.08 71 1.27 74.62 29 7.21 Yes 16 2.08 Yes 31 0.94 Yes -28 0.96 Yes 42 96.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 148909469 + NM_001303481 ZNF282 1 0.24 0.17 12 7.2 86.5 13 5.3 No 39 2.08 Yes 0 0 No -51 0.63 No 19 66.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44331927 + NM_181845 ZNF283 1 384.4 12.96 72 5.33 66.88 31 6.24 Yes 42 0.62 No 24 0.77 Yes -30 0.46 No 40 51.41 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 44334251 + NM_181845 ZNF283 1 7.91 1.07 45 10.25 87.23 39 6.32 Yes 30 0.02 No 0 0 No -30 0.51 No 40 64.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 44334271 + NM_181845 ZNF283 1 1.3 0.17 11 5.25 76.97 26 5.28 No 13 0.12 No 0 0 No -25 0.64 No 45 61.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 44334414 + NM_181845 ZNF283 1 4.43 0.63 28 7.41 86.16 27 5.48 No 14 1.74 Yes 0 0 No -26 0.89 Yes 44 95.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 15611830 + NM_001288645 ZNF286A 1 2.58 0.75 39 2.66 73.6 73 9.54 Yes 60 2.1 Yes 0 0 No -26 0.93 Yes 44 78.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 15613129 + NM_001288645 ZNF286A 1 0.39 0.13 7 4.14 85.08 25 5.29 No 12 0.94 Yes 24 0.93 Yes -24 0.74 Yes 46 76.96 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 15619372 + NM_001288645 ZNF286A 1 47.12 14.03 72 7.75 82.07 31 5.94 Yes 64 1.57 Yes 26 0.29 Yes -30 0.66 No 40 62.32 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 87879387 + NM_015021 ZNF292 1 0.14 0.1 7 0.91 81.29 31 5.7 Yes 51 0.08 No 34 0.46 Yes -30 0.66 Yes 40 81.2 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 87879391 + NM_015021 ZNF292 1 1.94 1.22 45 3.82 0 35 6 Yes 55 0.07 No 34 0.46 Yes -38 0.68 Yes 36 81.13 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 87890633 + NM_015021 ZNF292 1 0.32 0.18 11 11.4 92.42 29 4.15 No 1 1.52 Yes 0 0 No -24 0.61 No 42 72.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 87920168 + NM_015021 ZNF292 1 0.35 0.24 16 9.31 86.66 28 6.31 Yes 15 1.73 Yes 0 0 No -27 0.72 Yes 43 72.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 87923619 + NM_015021 ZNF292 1 0.95 0.57 26 1.92 64.57 34 6.67 Yes 72 1.28 Yes 0 0 No -33 0.7 Yes 37 87.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 87924715 + NM_015021 ZNF292 1 1.44 1.01 39 8.04 82.41 38 6.63 Yes 25 0.41 No 37 0.51 Yes -37 0.91 Yes 33 92.98 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 87926019 + NM_015021 ZNF292 1 0.19 0.18 12 2.99 80.73 24 6.18 Yes 11 1.14 Yes 0 0 No -23 0.78 Yes 47 33.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr6 87932487 + NM_015021 ZNF292 1 26.04 17.49 72 11.96 99.37 21 6.23 Yes 8 1.56 Yes 25 0.73 Yes -25 0.73 Yes 45 64.91 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 87952568 + NM_015021 ZNF292 1 0.91 0.51 25 4.37 84.07 22 4.8 No 60 0.32 No 0 0 No -25 0.44 No 45 41.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 99672900 - NM_001278287 ZNF3 1 1 0.51 25 3.12 68.26 51 5.75 Yes 53 0.99 Yes 22 0.8 Yes -20 0.67 Yes 41 85.6 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 99672952 - NM_001278287 ZNF3 1 0.32 0.15 11 6.81 75.33 89 11.44 Yes 76 1.98 Yes 0 0 No -27 0.35 No 43 43.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 35422764 + NM_001099438 ZNF30 1 4.24 0.18 12 2.46 75.63 24 5.2 No 61 1.52 Yes 0 0 No -23 0.77 Yes 47 85.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 35424531 + NM_001099438 ZNF30 1 132.95 4.79 71 5.92 81.59 40 7.69 Yes 27 1.11 Yes 22 0.9 Yes -39 0.83 Yes 31 93.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 35170732 + NM_001289182 ZNF302 1 1.44 0.75 35 7.83 71.93 11 6.4 Yes 41 1.13 Yes 31 0.34 Yes -31 0.42 No 36 56.67 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 35174059 + NM_001289182 ZNF302 1 0.77 0.14 9 6.27 87.33 29 5.73 Yes 72 0.6 No 26 0.86 Yes -29 0.78 Yes 41 75.28 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 35174059 + NM_001289182 ZNF302 1 285.37 41.53 72 6.27 87.33 29 5.73 Yes 72 0.6 No 26 0.86 Yes -29 0.78 Yes 41 75.28 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 35174896 + NM_001289182 ZNF302 1 8.69 5.76 68 6.07 85.53 43 9.9 Yes 30 1.69 Yes 42 0.69 Yes -42 0.59 No 28 69.69 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 57866638 + NM_001290319 ZNF304 1 8.28 1.17 46 9.05 86.72 25 7.28 Yes 12 1.95 Yes 24 0.94 Yes -24 0.97 Yes 46 95.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 6681502 + NM_001278559 ZNF316 1 4.5 2.79 65 8.96 77.78 37 7 Yes 24 2.2 Yes 0 0 No -36 0.59 No 34 75.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6681716 + NM_001278559 ZNF316 1 1.09 0.39 23 5.89 88.96 20 4.05 No 36 1.12 Yes 0 0 No -28 0.34 No 47 51.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 9265892 + NR_102435 ZNF317 1 2.59 1.94 57 10.85 88.27 43 6.96 Yes 30 1.7 Yes 0 0 No -35 0.88 Yes 28 81.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 9273730 + NR_102435 ZNF317 1 7.17 5.74 72 8.74 83.1 28 6.53 Yes 70 1.13 Yes 27 0.87 Yes -27 0.68 Yes 43 92.86 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 43310335 - NM_014345 ZNF318 1 0.33 0.51 24 3.22 68.08 53 7.61 Yes 28 1.11 Yes 0 0 No -40 0.56 No 30 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 43310335 - NM_014345 ZNF318 1 0.1 0.15 9 3.22 68.08 53 7.61 Yes 28 1.11 Yes 0 0 No -40 0.56 No 30 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr6 43316361 - NM_014345 ZNF318 1 0.1 0.14 10 -13.25 68.9 54 8.03 Yes 41 1.59 Yes 0 0 No -44 0.77 Yes 26 84.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 43316373 - NM_014345 ZNF318 1 0.16 0.18 12 -1.9 0 42 7.28 Yes 29 1.63 Yes 41 0.67 Yes -32 0.83 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 43316380 - NM_014345 ZNF318 1 0.13 0.19 12 1.93 0 35 6.8 Yes 22 1.63 Yes 41 0.67 Yes -25 0.88 Yes NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr6 43319855 - NM_014345 ZNF318 1 0.08 0.11 7 6.47 89.42 27 5.18 No 67 -3.24 No 0 0 No -26 0.75 Yes 19 62.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 53433256 - NR_037805 ZNF321P 1 11.53 0.74 43 8.11 91.46 22 6.86 Yes 52 1.71 Yes 0 0 No -21 0.97 Yes 49 94.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53433324 - NR_037805 ZNF321P 1 7.78 0.36 22 0.83 68.91 41 8 Yes 28 1.67 Yes 0 0 No -40 0.85 Yes 30 95.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 26642686 - NM_001242797 ZNF322 1 1.1 0.29 16 5.77 80.7 43 6.86 Yes 41 0.61 No 0 0 No -24 0.58 No 46 70.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 26654795 - NM_001242797 ZNF322 1 2.45 0.57 29 7.57 89.17 45 8.66 Yes 32 1.35 Yes 0 0 No -24 0.85 Yes 46 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 90478657 + NM_181781 ZNF326 1 0.33 0.49 28 1.41 56.75 9 5.39 No 72 -6.93 No 29 0.67 Yes -28 0.37 No 51 29.29 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 58644044 - NM_024620 ZNF329 1 2.96 0.32 18 11.28 95.65 34 7.18 Yes 21 1.46 Yes 33 0.73 Yes -33 0.61 No 37 73.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 58644786 - NM_024620 ZNF329 1 3.03 0.19 12 8.59 88.42 20 7.14 Yes 7 1.4 Yes 0 0 No -19 0.7 Yes 51 87.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 142147832 + NM_014487 ZNF330 1 0.37 0.29 16 8.92 89.04 26 4.07 No 23 0.98 Yes 0 0 No -25 0.87 Yes 45 86.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 142149553 + NM_014487 ZNF330 1 0.22 0.17 12 10.22 87.32 33 6.56 Yes 20 0.36 No 0 0 No -32 0.83 Yes 38 91.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 14811017 + NM_001300912 ZNF333 1 3.76 0.26 17 9.92 87 36 6.86 Yes 23 1.7 Yes 35 0.89 Yes -35 0.92 Yes 35 94.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 14812392 + NM_001300912 ZNF333 1 10.31 0.56 31 6.21 84.58 31 4.74 No 63 -1.19 No 26 0.62 Yes -23 0.55 No 47 70.86 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 14818728 + NM_001300912 ZNF333 1 1.97 0.13 8 10.09 96.18 50 6.68 Yes 51 0.67 No 23 0.53 Yes -23 0.54 No 33 45.7 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 14819139 + NM_001300912 ZNF333 1 2.44 0.21 10 4.46 78.01 24 6.63 Yes 11 2.3 Yes 23 0.95 Yes -23 0.85 Yes 47 89.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 14819935 + NM_001300912 ZNF333 1 6.42 0.4 19 8.05 84.39 22 6.56 Yes 9 1.27 Yes 0 0 No -21 0.84 Yes 49 82.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44577717 - NM_022095 ZNF335 1 2.71 1.18 48 2.63 74.36 29 6.32 Yes 16 1.33 Yes 0 0 No -28 0.97 Yes 42 96.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44578065 - NM_022095 ZNF335 1 0.35 0.25 14 6.99 79.83 13 4.87 No 0 1.36 Yes 23 0.87 Yes -24 0.8 Yes 46 72.89 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 44578187 - NM_022095 ZNF335 1 0.18 0.1 7 5.17 86.7 10 4.9 No 47 0.8 Yes 0 0 No -25 0.76 Yes 45 75.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44578735 - NM_022095 ZNF335 1 0.3 0.17 12 6.24 84.17 21 5.1 No NA NA NA 23 0.85 Yes -24 0.7 Yes 46 86.25 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 44579419 - NM_022095 ZNF335 1 0.77 0.39 19 9.25 84.98 34 5.37 No 67 1.63 Yes 0 0 No -27 0.66 No 43 48.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 44581151 - NM_022095 ZNF335 1 0.59 0.35 22 2.27 0 15 4.36 No 19 1.23 Yes 0 0 No -31 0.79 Yes 39 79.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44581369 - NM_022095 ZNF335 1 1.98 0.89 38 8.18 78.24 13 6.32 Yes 57 1.13 Yes 22 0.52 Yes -25 0.42 No 14 37.64 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 44581400 - NM_022095 ZNF335 1 0.95 0.46 25 -0.09 68.32 21 4.31 No 46 1.28 Yes 0 0 No -25 0.47 No 45 86.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 44582504 - NM_022095 ZNF335 1 0.34 0.15 8 4.55 82.13 18 4.8 No 5 0.68 No 0 0 No -17 0.75 Yes 53 78.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 44586317 - NM_022095 ZNF335 1 0.44 0.22 13 -15.02 60.46 22 4.98 No 15 -0.63 No 0 0 No -27 0.77 Yes 43 61.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 44586342 - NM_022095 ZNF335 1 1.35 0.56 30 -0.89 0 14 4.47 No 74 -3.03 No 24 0.85 Yes -21 0.37 No 58 52.27 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 44587909 - NM_022095 ZNF335 1 0.22 0.14 9 7.59 84.96 45 6.93 Yes 32 0.89 Yes 0 0 No -44 0.8 Yes 41 76.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44589315 - NM_022095 ZNF335 1 0.62 0.35 18 7.05 81.86 46 7.21 Yes 33 1.13 Yes 0 0 No -45 0.79 Yes 25 93.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44592318 - NM_022095 ZNF335 1 0.53 0.22 14 1.33 70.4 19 4.87 No 29 -2.89 No 28 0.37 Yes -18 0.66 No 52 71.7 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr20 44594137 - NM_022095 ZNF335 1 0.26 0.13 8 6.42 80.85 19 5.83 Yes -4 0.12 No 0 0 No -18 0.74 Yes 52 78.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 44596268 - NM_022095 ZNF335 1 0.66 0.24 15 -3.17 0 15 3.87 No 13 1.33 Yes 0 0 No -25 0.87 Yes 45 88.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 44596271 - NM_022095 ZNF335 1 17.47 7.31 71 3.13 73.73 23 6.24 Yes 10 1.34 Yes 0 0 No -22 0.9 Yes 48 85.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 25673357 - NM_015655 ZNF337 1 0.8 0.14 9 8.91 96.04 18 4.9 No 14 0.97 Yes 0 0 No -26 0.63 No 44 94.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr20 25615014 + NR_126467 ZNF337-AS1 1 1.25 0.13 9 8.74 87.46 24 6.08 Yes 11 1.41 Yes 0 0 No -23 0.88 Yes 47 85.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38304894 + NR_136709 ZNF33A 1 1.29 0.89 36 6.26 83.29 33 6.27 Yes 20 1.31 Yes 0 0 No -25 0.75 Yes 38 73.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38305802 + NR_136709 ZNF33A 1 0.19 0.14 9 -1.78 0 56 7.4 Yes 18 -1.51 No 26 0.75 Yes -30 0.62 No 40 69.5 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 38306239 + NR_136709 ZNF33A 1 0.45 0.35 18 2.52 73.79 26 5.48 No 28 0.85 Yes 0 0 No -25 0.89 Yes 45 90.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38314275 + NR_136709 ZNF33A 1 5.11 2.28 62 8.68 86.23 13 4.45 No 0 0.87 Yes 0 0 No -27 0.57 No 43 64.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 38323205 + NR_136709 ZNF33A 1 9.08 4.01 67 10.63 96.26 31 5.23 No 7 1.53 Yes 0 0 No -24 0.49 No 40 72.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 38323253 + NR_136709 ZNF33A 1 19.34 8.5 72 6.76 85.88 26 4.63 No 55 1.52 Yes 0 0 No -23 0.87 Yes 47 92.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38324066 + NR_136709 ZNF33A 1 0.24 0.1 7 4.74 84.41 34 7.3 Yes 39 2.95 Yes 0 0 No -33 0.89 Yes 37 88.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38324585 + NR_136709 ZNF33A 1 0.43 0.19 11 2 62.38 32 6.97 Yes 19 1.05 Yes 0 0 No -35 0.56 No 35 78.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 38324599 + NR_136709 ZNF33A 1 0.85 0.32 21 4.54 87.68 17 4.19 No 33 1.04 Yes 0 0 No -20 0.53 No 46 49.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 38328340 + NR_136709 ZNF33A 1 2.32 0.94 40 9.34 88.27 25 6 Yes 12 1.24 Yes 0 0 No -24 0.84 Yes 46 94.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38331504 + NR_136709 ZNF33A 1 0.75 0.33 18 3.72 77.64 78 6.52 Yes 65 0.07 No 0 0 No -35 0.72 Yes 35 69.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 38343305 + NR_136709 ZNF33A 1 35.94 15.79 72 0.25 76.83 21 5.62 Yes 8 0.71 No 23 0.62 Yes -27 0.37 No 43 51.02 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 43090145 - NM_001305033 ZNF33B 1 11.75 1.61 57 0.04 74.92 21 5.54 No 8 0.66 No 24 0.44 Yes -27 0.39 No 43 56.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 43092125 - NM_001305033 ZNF33B 1 1.73 0.19 12 8.79 93.36 19 5.26 No 71 0.26 No 0 0 No -27 0.62 No 43 63.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 43105959 - NM_001305033 ZNF33B 1 1.53 0.21 12 7.13 90.92 28 5.29 No 45 0.47 No 0 0 No -27 0.74 Yes 43 56.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 43109807 - NM_001305033 ZNF33B 1 128.05 15.58 72 6.79 88.38 26 4.86 No 55 1.52 Yes 23 0.62 Yes -23 0.87 Yes 47 93.05 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 43109855 - NM_001305033 ZNF33B 1 1.53 0.24 11 10.63 96.26 31 5.23 No 7 1.53 Yes 0 0 No -24 0.69 Yes 40 52.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 43112880 - NM_001305033 ZNF33B 1 1.19 0.14 9 8.53 91.09 15 5.66 Yes 2 0.72 No 0 0 No -27 0.68 Yes 43 62.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 2473432 - NM_001282499 ZNF343 1 1.76 0.4 24 7.59 84.2 17 5.35 No 47 0.15 No 0 0 No -29 0.72 Yes 41 87.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 2474649 - NM_001282499 ZNF343 1 2.06 0.46 27 6.15 83.11 23 5.39 No -3 -1.9 No 0 0 No -23 0.7 Yes 48 49.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 176477703 + NM_001308213 ZNF346 1 1.44 0.85 39 8.01 85.66 50 7.86 Yes 37 1.47 Yes 30 0.77 Yes -30 0.92 Yes 40 93.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 176471392 + NM_001308213 ZNF346 1 0.23 0.17 12 -0.55 67.81 33 5.98 Yes 20 0.19 No 29 0.59 Yes -32 0.8 Yes 38 90.14 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 176469391 + NM_001308213 ZNF346 1 0.78 0.53 30 3.79 82.54 22 5.17 No 9 0.92 Yes 0 0 No -20 0.79 Yes 49 75.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 176471392 + NM_001308213 ZNF346 1 2.32 1.63 57 -0.55 67.81 33 5.98 Yes 20 0.19 No 29 0.59 Yes -32 0.8 Yes 38 90.14 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr5 176477703 + NM_001308213 ZNF346 1 0.54 0.32 21 8.01 85.66 50 7.86 Yes 37 1.47 Yes 30 0.77 Yes -30 0.92 Yes 40 93.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 176477703 + NM_001308213 ZNF346 1 7.85 4.67 71 8.01 85.66 50 7.86 Yes 37 1.47 Yes 30 0.77 Yes -30 0.92 Yes 40 93.49 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 176486241 + NM_001308213 ZNF346 1 0.32 0.15 9 9.16 85.59 36 6.81 Yes 23 0.48 No 0 0 No -25 0.42 No 45 51.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 176489763 + NM_001308213 ZNF346 1 0.62 0.44 26 9.44 94.45 24 4.38 No 17 1.1 Yes 0 0 No -23 0.93 Yes 47 92.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53646793 - NM_032584 ZNF347 1 5.41 0.47 22 9.06 85.1 22 4.88 No 1 0.58 No 0 0 No -21 0.58 No 49 59.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 53647225 - NM_032584 ZNF347 1 1.98 0.25 16 7.5 90.85 37 6.65 Yes 24 0.72 No 0 0 No -32 0.62 No 38 82.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 44692435 + NM_003420 ZNF35 1 12.51 2.53 61 6.55 82.54 26 5.48 No 13 1.78 Yes 22 0.97 Yes -25 0.84 Yes 45 95.04 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 52470650 - NM_021632 ZNF350 1 7.08 1.25 45 1.35 0 23 11.53 Yes 56 2.2 Yes 0 0 No -32 0.43 No 38 57.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 52470654 - NM_021632 ZNF350 1 5.83 1.07 45 5.62 84.59 19 11.36 Yes 52 2.21 Yes 28 0.72 Yes -28 0.61 No 42 54.61 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 52472399 - NM_021632 ZNF350 1 1.24 0.18 13 7.53 84.15 29 4.9 No -3 -2.23 No 25 0.52 Yes -25 0.68 Yes 45 59.32 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 178153229 - NM_005649 ZNF354A 1 0.71 0.11 8 8.55 91.39 40 8.7 Yes 27 1.76 Yes 39 0.64 Yes -39 0.77 Yes 31 78.55 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr5 178154330 - NM_005649 ZNF354A 1 10.68 0.54 23 7.98 82.99 33 7.71 Yes 20 1.37 Yes 0 0 No -32 0.9 Yes 38 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38384465 + NM_001324257 ZNF37A 1 269.43 21.13 72 7.78 77.95 16 6.85 Yes 3 0.35 No 22 0.51 Yes -30 0.76 Yes 40 88.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 38384465 + NM_001324257 ZNF37A 1 255.14 22.08 72 7.78 77.95 16 6.85 Yes 3 0.35 No 22 0.51 Yes -30 0.76 Yes 40 88.93 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 38401759 + NM_001324257 ZNF37A 1 0.21 0.11 8 11.6 91.89 109 11.72 Yes NA NA NA 0 0 No -29 0.15 No 41 54.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 38403689 + NM_001324257 ZNF37A 1 1.19 0.61 25 -3.7 0 17 4 No 59 1.31 Yes 0 0 No -28 0.75 Yes 42 77.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 38404143 + NM_001324257 ZNF37A 1 0.36 0.17 12 3.04 75.98 26 4.76 No 28 0.49 No 0 0 No -25 0.68 Yes 41 67.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 43018773 - NR_026777 ZNF37BP 1 19.58 2.33 66 7.71 91.19 20 5.47 No 2 0.32 No 23 0.96 Yes -26 0.4 No 51 52.69 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 43021088 - NR_026777 ZNF37BP 1 1.63 0.21 13 6.43 93.38 26 5.25 No 3 0.87 Yes 0 0 No -25 0.9 Yes 45 87.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 43021109 - NR_026777 ZNF37BP 1 3.82 0.26 12 9.41 94.37 64 9.59 Yes 51 0.74 No 30 0.02 Yes -57 0.61 No 20 64.35 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 37102917 + NM_032825 ZNF382 1 3.99 0.42 23 8.24 85.05 28 5.47 No 66 0.59 No 0 0 No -27 0.88 Yes 43 96.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 37117034 + NM_032825 ZNF382 1 0.78 0.14 8 -0.92 81.79 30 5.01 No 8 1 Yes 26 0.94 Yes -29 0.84 Yes 41 97.11 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 6781699 - NM_133476 ZNF384 1 29.49 23.31 72 11.04 87.94 58 7.99 Yes 45 0.74 No 29 0.46 Yes -32 0.63 No 27 76.35 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr12 6786018 - NM_133476 ZNF384 1 0.38 0.33 20 6.27 96.83 22 4.8 No 76 -4.72 No 0 0 No -21 0.97 Yes 49 96.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6786426 - NM_133476 ZNF384 1 7.42 6.69 71 8.91 86.28 19 5.75 Yes 32 -1.74 No 27 0.5 Yes -31 0.55 No 39 56.71 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr12 6787510 - NM_133476 ZNF384 1 0.56 0.36 24 2.36 65.6 24 5.48 No 11 1.08 Yes 23 0.93 Yes -23 0.83 Yes 47 65.06 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 6787510 - NM_133476 ZNF384 1 4.66 2.94 69 2.36 65.6 24 5.48 No 11 1.08 Yes 23 0.93 Yes -23 0.83 Yes 47 65.06 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr12 6787531 - NM_133476 ZNF384 1 0.26 0.17 10 2.4 75.79 37 6.43 Yes 70 0.85 Yes 23 0.93 Yes -36 0.85 Yes 34 93.44 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 6787968 - NM_133476 ZNF384 1 1.01 0.54 28 3.9 69.02 21 4.97 No 8 0.47 No 0 0 No -24 0.54 No 46 65.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 6787986 - NM_133476 ZNF384 1 0.21 0.13 7 2.79 69.52 26 6.51 Yes 65 -3.26 No 0 0 No -25 0.82 Yes 45 79.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 6788688 - NM_133476 ZNF384 1 1.75 1.42 50 1.49 0 30 5.92 Yes 17 1.22 Yes 25 0.85 Yes -29 0.87 Yes 41 90.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 6789786 - NM_133476 ZNF384 1 0.2 0.17 12 10.41 92.17 28 5.83 Yes 33 1.4 Yes 0 0 No -27 0.58 No 19 65.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6791292 - NM_133476 ZNF384 1 0.22 0.18 12 9.12 88.27 52 9.27 Yes 39 2.94 Yes 0 0 No -51 0.97 Yes 19 97.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 6794482 - NM_133476 ZNF384 1 0.14 0.13 9 4.07 0 69 9.83 Yes 56 0.99 Yes 0 0 No -31 0.52 No 39 66.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr12 6796554 - NM_133476 ZNF384 1 0.16 0.15 11 8.77 82.02 31 6.53 Yes -1 0.32 No 0 0 No -30 0.85 Yes 40 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 28206765 - NM_018660 ZNF395 1 1.38 0.46 30 6.37 81.73 30 6.41 Yes 17 1.21 Yes 0 0 No -29 0.95 Yes 41 95.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 32821565 + NM_001135178 ZNF397 1 7.8 0.94 42 5.36 70.24 42 8.35 Yes 29 0.55 No 0 0 No -28 0.46 No 42 58.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr18 72493849 + NM_017757 ZNF407 1 0.34 0.13 9 6.02 78.33 24 5.27 No 54 0.81 Yes 0 0 No -23 0.7 Yes 47 83.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr18 72515919 + NM_017757 ZNF407 1 0.59 0.21 12 7.41 82.72 27 6.26 Yes 5 0.35 No 26 0.76 Yes -26 0.67 Yes 44 73.14 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr18 72549794 + NM_017757 ZNF407 1 0.66 0.21 14 7.66 90.51 20 5.54 No 7 1.07 Yes 0 0 No -19 0.59 No 51 84.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr18 72692283 + NM_017757 ZNF407 1 0.75 0.18 13 2.82 83.57 29 5.1 No 75 2.39 Yes 0 0 No -28 0.85 Yes 42 96.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 46723667 + NM_001184751 ZNF408 1 0.93 0.15 10 9.3 85.79 19 4.42 No 26 0.69 No 0 0 No -32 0.44 No 38 55.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 47315814 - NM_001324147 ZNF41 1 40.75 3.24 65 5.86 73.39 20 5.74 Yes 7 0.69 No 21 0.67 Yes -19 0.48 No 51 56.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 47315838 - NM_001324147 ZNF41 1 7.33 0.6 31 9.06 81.85 37 7.02 Yes 24 0.26 No 23 0.44 Yes -31 0.67 Yes 39 72.46 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 74354975 + NM_001242924 ZNF410 1 3.9 2.6 65 3.26 70.78 24 4.64 No 59 -4.68 No 23 0.66 Yes -23 0.43 No 47 56.09 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 74360478 + NM_001242924 ZNF410 1 0.46 0.53 27 6.08 83.23 19 6.16 Yes 6 1.34 Yes 18 0.77 Yes -25 0.53 No 45 62.29 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 74365535 + NM_001242924 ZNF410 1 0.26 0.32 18 9.54 82.29 28 7.08 Yes 15 1.27 Yes 0 0 No -27 0.74 Yes 43 87.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 74371633 + NM_001242924 ZNF410 1 2.2 2.44 62 9.62 86.61 25 6.16 Yes 12 1.61 Yes 24 0.86 Yes -24 0.86 Yes 46 85.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 74376709 + NM_001242924 ZNF410 1 0.14 0.13 9 5.89 74.98 21 5.84 Yes 37 1.69 Yes 0 0 No -20 0.53 No 50 80.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 74376946 + NM_001242924 ZNF410 1 1.78 1.39 51 1.22 79.56 17 4 No 4 0.46 No 0 0 No -20 0.96 Yes 50 95.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 74384832 + NM_001242924 ZNF410 1 0.43 0.35 18 9.84 86.91 26 4.8 No 72 -1.29 No 0 0 No -31 0.8 Yes 39 71.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 74388845 + NM_001242924 ZNF410 1 1.67 0.88 38 4.7 76.29 27 6.08 Yes 54 1.06 Yes 0 0 No -30 0.35 No 40 52.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 74389195 + NM_001242924 ZNF410 1 0.14 0.14 10 9.73 88.13 26 6.15 Yes 32 0.49 No 0 0 No -26 0.52 No 40 63.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8576408 - NM_001146175 ZNF414 1 1.07 0.21 13 -2.35 67.17 21 4.69 No 32 1.43 Yes 0 0 No -20 0.62 No 26 55.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8577016 - NM_001146175 ZNF414 1 0.67 0.21 11 9.77 83.04 31 3.97 No 23 0.95 Yes 24 0.78 Yes -24 0.78 Yes 46 67.79 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 9638597 - NM_001318055 ZNF426 1 0.29 0.11 8 0.85 67.8 28 6.69 Yes 15 0.71 No 0 0 No -27 0.86 Yes 43 92.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 9641743 - NM_001318055 ZNF426 1 0.56 0.21 13 0.49 0 35 5.47 No 22 0.75 No 0 0 No -34 0.7 Yes NA NA NA BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 9646197 - NM_001318055 ZNF426 1 2.64 0.89 42 6.68 80.84 21 5.54 No 75 0.21 No 0 0 No -20 0.95 Yes 50 96.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 21999393 - NM_001256654 ZNF43 1 0.78 0.33 20 6.28 93.93 20 4.69 No 7 0.26 No 0 0 No -20 0.82 Yes 50 69.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 22000503 - NM_001256654 ZNF43 1 1.03 0.46 27 8.24 90.91 43 6.41 Yes 50 1.08 Yes 0 0 No -20 0.56 No 50 73.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 21203820 + NM_025189 ZNF430 1 2.43 0.86 39 9.96 84.79 28 5.83 Yes 28 1.19 Yes 0 0 No -27 0.67 Yes 46 86.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 21216894 + NM_025189 ZNF430 1 36.39 19.54 72 2.89 77.22 26 6 Yes 13 0.68 No 22 0.88 Yes -25 0.9 Yes 45 90.56 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 21232310 + NM_025189 ZNF430 1 0.73 0.24 13 7.24 89.01 31 5.65 Yes 59 0.2 No 30 0.77 Yes -30 0.87 Yes 40 90.5 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 21236226 + NM_025189 ZNF430 1 0.37 0.15 11 2.01 68.45 54 6.43 Yes 72 -1.92 No 22 0.73 Yes -44 0.62 No 26 89.31 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 21236244 + NM_025189 ZNF430 1 0.88 0.36 20 0.62 81.05 27 4.09 No 2 0.02 No 22 0.73 Yes -26 0.59 No 44 38.02 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 21333881 + NR_138053 ZNF431 1 1.15 0.38 21 -9.5 71.26 41 6.48 Yes 28 1.28 Yes 40 0.49 Yes -40 0.88 Yes 30 85.21 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 21333953 + NR_138053 ZNF431 1 0.38 0.14 7 7.16 90.62 22 6.6 Yes 9 1.09 Yes 0 0 No -21 0.97 Yes 49 94.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 21344348 + NR_138053 ZNF431 1 6.77 2.33 66 2.38 69.49 27 4.73 No 46 -4.64 No 0 0 No -21 0.52 No 49 56.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 21350373 + NR_138053 ZNF431 1 98.18 20.46 72 3.12 80.81 26 6.14 Yes 13 0.69 No 25 0.86 Yes -25 0.89 Yes 45 84.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 21352605 + NR_138053 ZNF431 1 2.4 0.78 35 9.12 79.32 22 5.73 Yes 35 0.12 No 21 0.87 Yes -26 0.63 No 44 79.02 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 52540857 - NM_014650 ZNF432 1 1.1 0.17 11 2.89 78.8 35 8.37 Yes 22 1.29 Yes 0 0 No -34 0.91 Yes 36 95.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 52543079 - NM_014650 ZNF432 1 1.32 0.15 10 4.74 84.41 48 8.07 Yes 35 2.62 Yes 0 0 No -47 0.9 Yes 23 95.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 31199370 - NM_001143769 ZNF438 1 14.6 0.78 36 7.02 77.19 59 8 Yes 46 0.28 No 0 0 No -37 0.61 No 33 47.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 31212345 - NM_001143769 ZNF438 1 12.21 0.72 33 2.11 69.92 40 5.97 Yes 65 -5.21 No 28 0.67 Yes -28 0.53 No 42 68.21 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 31219709 - NM_001143769 ZNF438 1 21.73 1.32 49 7.29 89.81 24 4.3 No 7 0.98 Yes 0 0 No -23 0.86 Yes 47 83.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 31220170 - NM_001143769 ZNF438 1 1.88 0.14 9 8.66 91.41 54 7.95 Yes 41 0.64 No 0 0 No -48 0.47 No 51 71.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 31225052 - NM_001143769 ZNF438 1 1.91 0.14 10 3.65 83.49 24 5.29 No 50 -5.29 No 0 0 No -24 0.69 Yes 46 67.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 12382793 - NM_001164276 ZNF44 1 3.77 0.72 32 8.76 82.05 16 5.39 No 25 -0.69 No 0 0 No -22 0.16 No 33 14.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 11937501 + NM_152357 ZNF440 1 1.47 0.24 14 1.34 0 36 8.98 Yes 43 1.19 Yes 0 0 No -35 0.83 Yes 35 86.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 11941088 + NM_152357 ZNF440 1 3.66 0.44 25 0.18 64.52 26 6.43 Yes 13 1.88 Yes 25 0.92 Yes -25 0.86 Yes 45 82.28 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12461886 - NM_030824 ZNF442 1 2.22 0.25 13 7.37 84.85 21 4.95 No 8 0.39 No 0 0 No -23 0.57 No 43 61.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 56653644 + NM_001253792 ZNF444 1 0.6 0.13 8 9.07 85.67 33 6.24 Yes 20 1.16 Yes 32 0.91 Yes -32 0.96 Yes 38 95.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 56657620 + NM_001253792 ZNF444 1 0.66 0.14 9 -0.66 0 39 6.71 Yes 51 1.71 Yes 0 0 No -39 0.86 Yes 31 91.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56667129 + NM_001253792 ZNF444 1 2 0.88 38 6.96 90.31 24 5.29 No 11 0.68 No 23 0.87 Yes -23 0.91 Yes 47 93.5 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 56670992 + NM_001253792 ZNF444 1 262.03 43.21 72 7.46 89.77 20 5.83 Yes 7 2.38 Yes 19 0.87 Yes -19 0.67 Yes 51 92.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 44490188 - NM_181489 ZNF445 1 1.01 0.4 20 4.3 81.48 27 6.08 Yes 34 -2.47 No 0 0 No -26 0.37 No 48 28.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 44490229 - NM_181489 ZNF445 1 0.28 0.1 7 -9.6 81.99 18 6.48 Yes 65 -0.97 No 0 0 No -30 0.92 Yes 40 92.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44492063 - NM_181489 ZNF445 1 2.6 0.36 20 -12.7 81.28 24 4.8 No 37 -1.8 No 0 0 No -23 0.59 No 47 50.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 44492077 - NM_181489 ZNF445 1 1.19 0.13 9 -6.72 0 16 4 No 64 1.31 Yes 20 0.64 Yes -61 0.31 No 61 8.39 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 44499326 - NM_181489 ZNF445 1 0.79 0.13 9 3.25 80.12 32 6.05 Yes 19 1.29 Yes 0 0 No -31 0.9 Yes 39 94.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 44499329 - NM_181489 ZNF445 1 0.84 0.17 11 5.72 85.02 29 5.84 Yes 16 1.32 Yes 0 0 No -28 0.89 Yes 42 95.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 44506556 - NM_181489 ZNF445 1 10.18 0.65 31 11.8 92.63 38 5.87 Yes 18 0.95 Yes 0 0 No -30 0.57 No 40 82.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 44510910 - NM_181489 ZNF445 1 5.69 0.4 15 9.93 93.1 30 6.55 Yes 17 0.79 Yes 0 0 No -29 0.85 Yes 41 84.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58991659 + NM_017908 ZNF446 1 11.83 0.85 39 6.86 79.54 26 7.21 Yes NA NA NA 19 0.65 Yes -27 0.74 Yes 45 53.96 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 44420083 - NM_003425 ZNF45 1 6.94 1.4 50 7.35 89.9 34 5.93 Yes 21 1.03 Yes 0 0 No -33 0.41 No 49 56.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44423915 - NM_003425 ZNF45 1 6.94 1.58 54 7.77 83.01 37 7.14 Yes 24 1.8 Yes 25 0.83 Yes -36 0.65 No 34 73.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 44427502 - NM_003425 ZNF45 1 1.56 0.4 24 10.28 87.99 26 5.06 No 13 0.19 No 0 0 No -26 0.64 No 44 78.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 44434153 - NM_003425 ZNF45 1 6.92 0.38 21 6.66 80.08 21 6.43 Yes 8 0.66 No 20 0.75 Yes -23 0.52 No 47 50.4 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 44435516 - NM_003425 ZNF45 1 2.09 0.15 9 -4.91 78.04 24 5.92 Yes 11 1.09 Yes 0 0 No -23 0.86 Yes 47 88.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 44435518 - NM_003425 ZNF45 1 172.09 9.43 72 7.02 80.12 22 5.74 Yes 9 1.09 Yes 21 0.8 Yes -21 0.83 Yes 49 89.08 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 44438783 - NM_003425 ZNF45 1 1.88 0.24 13 4.65 79.27 24 4.74 No 23 2.17 Yes 0 0 No -23 0.62 No 47 63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 44438880 - NM_003425 ZNF45 1 5.32 0.72 36 5.97 90.07 23 6.56 Yes -3 0.24 No 35 0.25 Yes -22 0.29 No 45 40.16 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr6 56964266 + NM_015555 ZNF451 1 32.94 14.18 72 11.1 92.8 39 7.11 Yes 26 1.51 Yes 38 0.72 Yes -42 0.86 Yes 28 85.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 56965400 + NM_015555 ZNF451 1 207.44 90.58 72 0.26 69.16 52 7.48 Yes 39 0.54 No 32 0.17 Yes -51 0.79 Yes 19 76.9 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 56991329 + NM_015555 ZNF451 1 0.82 0.28 15 9.46 80.02 28 5.64 Yes 64 0.28 No 27 0.42 Yes -25 0.56 No 45 91.66 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr6 56998508 + NM_015555 ZNF451 1 0.99 0.57 28 3.62 0 51 6.74 Yes 38 0.82 Yes 0 0 No -50 0.74 Yes 20 91.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 57001140 + NM_015555 ZNF451 1 0.61 0.42 24 8.88 85.67 33 5.63 Yes 20 1.13 Yes 0 0 No -25 0.68 Yes 45 75.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 57001897 + NM_015555 ZNF451 1 0.29 0.22 11 7.84 87.51 15 5.31 No 2 0.86 Yes 0 0 No -26 0.8 Yes 44 85.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 57006185 + NM_015555 ZNF451 1 0.17 0.11 7 7.13 82.77 21 6.17 Yes 25 0.36 No 0 0 No -27 0.73 Yes 43 81.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 57006728 + NM_015555 ZNF451 1 0.23 0.13 8 2.67 71.32 17 6.26 Yes 20 0.32 No 21 0.6 Yes -21 0.82 Yes 49 88.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 57023317 + NM_015555 ZNF451 1 0.34 0.14 9 4.97 88.51 29 3.79 No 42 1.13 Yes 0 0 No -31 0.55 No 39 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 57023317 + NM_015555 ZNF451 1 2.07 1.03 42 4.97 88.51 29 3.79 No 42 1.13 Yes 0 0 No -31 0.55 No 39 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 57792763 + NM_006635 ZNF460 1 0.15 0.1 7 4.57 81.43 23 5.2 No 34 0.63 No 0 0 No -22 0.53 No 48 63.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 37134765 - NM_001322826 ZNF461 1 329.25 11.21 72 10.38 89.09 34 4.76 No 21 0.67 No 33 0.45 Yes -33 0.67 Yes 37 46.01 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 37138434 - NM_001322826 ZNF461 1 4.22 0.1 7 1.87 0 31 4.61 No 59 -1.5 No 0 0 No -30 0.87 Yes 40 81.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 37139054 - NM_001322826 ZNF461 1 29.83 1.28 49 6.35 95.85 28 5.26 No 3 0.27 No 0 0 No -27 0.61 No 43 44.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 37149349 - NM_001322826 ZNF461 1 12.22 1.38 50 3.71 60.27 50 6.96 Yes 17 -1.5 No 29 0.4 Yes -28 0.28 No 42 23.78 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 53348550 - NM_001008801 ZNF468 1 78.65 12.65 72 3.46 0 27 5.66 Yes 32 1.01 Yes 26 0.69 Yes -26 0.78 Yes 44 83.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 53348554 - NM_001008801 ZNF468 1 1.63 0.29 18 -0.53 83.05 23 5.4 No 28 1.03 Yes 26 0.69 Yes -22 0.74 Yes 48 79.3 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 53357361 - NM_001008801 ZNF468 1 4.6 0.5 25 9.03 79.82 22 5.29 No 31 2.38 Yes 21 0.73 Yes -43 0.71 Yes 27 67.56 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 53357380 - NM_001008801 ZNF468 1 53.84 5.56 70 8.06 83.57 25 5.54 No 12 2.14 Yes 24 0.96 Yes -24 0.89 Yes 46 93.84 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 50543969 + NM_001308424 ZNF473 1 0.89 0.11 7 8.68 83.21 28 5.78 Yes 15 1.75 Yes 0 0 No -27 0.82 Yes 43 78.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 52801042 + NM_144684 ZNF480 1 0.2 0.13 8 5.57 81.26 26 5.41 No 13 1.14 Yes 0 0 No -21 0.86 Yes 49 90.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 52802970 + NM_144684 ZNF480 1 0.21 0.11 7 2.15 0 34 7.75 Yes 21 1.74 Yes 0 0 No -33 0.81 Yes 37 89.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 52803782 + NM_144684 ZNF480 1 0.75 0.51 30 11.38 90 38 7 Yes 30 -0.84 No 0 0 No -24 0.41 No 46 58.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 52815423 + NM_144684 ZNF480 1 0.37 0.25 15 9.23 94.37 30 6.99 Yes 17 0.72 No 0 0 No -29 0.9 Yes 41 93.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 52820668 + NM_144684 ZNF480 1 0.18 0.15 10 4.99 93.95 28 5.29 No 46 0.51 No 27 0.8 Yes -58 0.41 No 12 60.62 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr9 95610858 - NM_001261459 ZNF484 1 0.83 0.14 10 6.18 87.82 18 7.03 Yes 5 1.05 Yes 26 0.72 Yes -28 0.94 Yes 42 92.84 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 95616241 - NM_001261459 ZNF484 1 8.13 1.47 49 7.72 78.01 28 5.04 No 23 0.06 No 0 0 No -23 0.4 No 47 55.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 95616972 - NM_001261459 ZNF484 1 1.11 0.22 11 8.29 88.21 27 5.2 No 37 0.68 No 0 0 No -26 0.49 No 44 40.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 20299207 + NM_052852 ZNF486 1 6.33 0.76 41 3.97 85.77 21 4.6 No 28 0.14 No 20 0.79 Yes -20 0.66 No 50 76.81 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 20299902 + NM_052852 ZNF486 1 1.13 0.13 9 9.65 87.15 31 6.08 Yes 59 -2.16 No 0 0 No -32 0.56 No 40 62.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 20300262 + NM_052852 ZNF486 1 1.7 0.19 12 6.77 92.55 24 7.39 Yes 24 0.78 Yes 0 0 No -24 0.41 No 47 56.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 20301653 + NM_052852 ZNF486 1 1.71 0.25 14 7.72 89.44 29 6.85 Yes 60 0.72 No 0 0 No -29 0.82 Yes 41 80.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 20306923 + NM_052852 ZNF486 1 1.8 0.25 14 8.92 81.97 23 6.41 Yes 10 1.01 Yes 0 0 No -22 0.95 Yes 48 93.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12692536 - NM_020714 ZNF490 1 0.59 0.24 13 -2.06 70.93 29 5.69 Yes 2 0.95 Yes 0 0 No -28 0.68 Yes 42 51.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 12705614 - NM_020714 ZNF490 1 0.52 0.17 9 8.01 87.85 28 5.48 No 15 0.96 Yes 0 0 No -27 0.93 Yes 43 92.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12720789 - NM_020714 ZNF490 1 26.89 7.24 72 9.63 87.44 23 5.55 No 31 0.6 No 32 0.83 Yes -32 0.76 Yes 38 79.38 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 21588562 + NM_145326 ZNF493 1 95.96 8.57 72 2.85 80.81 26 5.99 Yes 13 0.69 No 0 0 No -25 0.89 Yes 45 87.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 247464745 - NM_032752 ZNF496 1 1.78 0.6 30 7.4 95.4 19 4.9 No 6 0.77 Yes 0 0 No -17 0.59 No 52 83.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 247466038 - NM_032752 ZNF496 1 0.86 0.25 15 9.48 82.19 32 4.39 No 45 1.35 Yes 0 0 No -23 0.71 Yes 49 71.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 247466608 - NM_032752 ZNF496 1 0.66 0.19 12 8.04 85.08 33 4.18 No 6 0.59 No 0 0 No -18 0.47 No 52 77.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 247468574 - NM_032752 ZNF496 1 1.53 0.51 20 9.91 94.53 24 5.29 No 76 0.12 No 0 0 No -24 0.61 No 47 77.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 247471330 - NM_032752 ZNF496 1 4.92 1.67 55 6.19 90.84 20 5.1 No 15 0.97 Yes 0 0 No -23 0.73 Yes 47 76.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 247472834 - NM_032752 ZNF496 1 0.99 0.49 21 6.65 78.25 12 7.55 Yes -1 1.88 Yes 0 0 No -30 0.78 Yes 40 85.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 247472882 - NM_032752 ZNF496 1 0.26 0.11 8 9.25 87.26 23 7.53 Yes 10 1.77 Yes 0 0 No -22 0.94 Yes 48 94.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 247486108 - NM_032752 ZNF496 1 3.56 0.89 42 10.34 94.56 35 5.83 Yes 37 0.88 Yes 27 0.38 Yes -34 0.67 Yes 36 45.68 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr1 247492871 - NM_032752 ZNF496 1 6.14 1.9 52 4.75 77.07 30 7.48 Yes 62 0.7 No 29 0.94 Yes -29 0.72 Yes 41 88.48 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 247494526 - NM_032752 ZNF496 1 0.59 0.15 8 1.63 0 20 4.58 No 7 1.32 Yes 0 0 No -19 0.95 Yes 51 87.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 4809189 - NM_021646 ZNF500 1 0.97 0.13 9 3.75 84.95 22 5 No 40 -0.93 No 0 0 No -26 0.67 Yes 24 50.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 4812715 - NM_021646 ZNF500 1 7.86 0.96 40 3.99 67.7 22 3.58 No 26 0.34 No 24 0.91 Yes -24 0.75 Yes 46 80.42 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 4814780 - NM_021646 ZNF500 1 9.36 0.99 35 4.62 83.78 36 5.48 No 18 0.18 No 0 0 No -30 0.62 No 40 74.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 19931476 - NM_001145404 ZNF506 1 1.24 0.54 25 7.39 84.41 25 4.55 No 49 0.56 No 24 0.89 Yes -24 0.86 Yes 46 84.18 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 32850311 + NM_001136156 ZNF507 1 1 0.57 28 7.01 79.08 65 7.44 Yes 73 0.3 No 0 0 No -35 0.54 No 35 41.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 32850410 + NM_001136156 ZNF507 1 0.24 0.14 10 1.68 68.23 38 5.34 No 75 0.94 Yes 0 0 No -37 0.62 No 33 85.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 32873624 + NM_001136156 ZNF507 1 0.19 0.11 7 -9.71 79.23 33 6.93 Yes 20 1.22 Yes 0 0 No -32 0.95 Yes 38 97.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 99522757 - NM_001314059 ZNF510 1 7.38 2.36 65 0.77 79.83 33 5.65 Yes 52 0.22 No 0 0 No -32 0.74 Yes 38 83.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 99536219 - NM_001314059 ZNF510 1 1.05 0.22 15 -3.91 0 37 6.3 Yes 24 0.28 No 0 0 No -36 0.71 Yes 34 63.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 135123673 + NM_145806 ZNF511 1 0.18 0.19 12 -0.93 0 14 3.46 No 12 0.88 Yes 0 0 No -24 0.86 Yes 46 77.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 135125224 + NM_145806 ZNF511 1 1.04 1.4 52 -2.57 0 24 6.05 Yes 11 1.61 Yes 0 0 No -23 0.93 Yes 47 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 135126319 + NM_145806 ZNF511 1 0.07 0.13 8 5.08 86.82 19 4.45 No 39 0.84 Yes 0 0 No -51 0.58 No 19 81.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 27820936 + NM_001271318 ZNF512 1 11.13 3.22 69 2.37 74 16 6.43 Yes 63 -1.96 No 22 0.34 Yes -23 0.54 No 47 62.49 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 27820939 + NM_001271318 ZNF512 1 0.59 0.18 10 -2.42 0 9 3.87 No 66 -1.97 No 0 0 No -26 0.55 No 44 67.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27820936 + NM_001271318 ZNF512 1 26.2 7.88 72 2.37 74 16 6.43 Yes 63 -1.96 No 22 0.34 Yes -23 0.54 No 47 62.49 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 27822880 + NM_001271318 ZNF512 1 0.25 0.21 12 2.59 76.92 27 5.08 No 66 0.1 No 0 0 No -26 0.5 No 50 74.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 27839685 + NM_001271318 ZNF512 1 3.09 1.03 39 8.25 79.86 42 6.38 Yes 29 1.5 Yes 0 0 No -26 0.56 No 44 80.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 27841971 + NM_001271318 ZNF512 1 0.22 0.14 9 11.04 92.06 28 3.9 No 61 1.33 Yes 0 0 No -27 0.38 No 43 53.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 27842516 + NM_001271318 ZNF512 1 5.95 3.78 70 9.41 94.37 25 8.54 Yes 56 1.16 Yes 0 0 No -24 0.97 Yes 46 97.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 62592426 - NM_020713 ZNF512B 1 0.19 0.1 7 6.89 82.67 36 6 Yes 23 0.26 No 0 0 No -24 0.78 Yes 41 68.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr20 62594159 - NM_020713 ZNF512B 1 1.71 0.29 16 2.58 66.53 32 6.98 Yes 19 2.59 Yes 31 0.95 Yes -31 0.52 No 39 78.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 62594596 - NM_020713 ZNF512B 1 2.13 0.74 36 5.01 83.66 32 5.66 Yes 36 1.97 Yes 0 0 No -31 0.57 No 39 57.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 62595749 - NM_020713 ZNF512B 1 2.97 1.13 41 -2.86 75.35 35 6.16 Yes 33 1.78 Yes 38 0.13 Yes -34 0.92 Yes 36 95.65 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr20 62596027 - NM_020713 ZNF512B 1 0.64 0.28 17 2.86 81.33 16 4.6 No 51 1.93 Yes 0 0 No -26 0.61 No 44 46.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 62598072 - NM_020713 ZNF512B 1 0.41 0.18 9 1.95 74.52 21 4.97 No -3 0.55 No 0 0 No -52 0.57 No 18 62.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 27601221 - NM_144631 ZNF513 1 0.31 0.11 7 7.44 89.2 23 5.2 No 31 -0.09 No 0 0 No -22 0.63 No 48 91.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 27601483 - NM_144631 ZNF513 1 1.1 0.26 16 2.43 80.39 35 5.61 Yes 59 1.1 Yes 22 0.43 Yes -34 0.47 No 36 51.5 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 27601486 - NM_144631 ZNF513 1 0.65 0.15 9 8.15 86 32 5.42 No 56 1.09 Yes 22 0.43 Yes -31 0.55 No 39 61.28 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 95818703 - NM_032788 ZNF514 1 2.49 0.18 9 5.5 80.25 22 4.9 No 9 0.83 Yes 0 0 No -21 0.54 No 53 68.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 97893312 + NM_001330734 ZNF518A 1 23.01 8.38 72 5.67 71.34 34 7.97 Yes 67 -3.92 No 33 0.54 Yes -38 0.49 No 32 54.5 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 97894926 + NM_001330734 ZNF518A 1 26.26 5.24 71 1.37 68.2 40 6.3 Yes -2 0.04 No 19 0.49 Yes -31 0.65 No 39 88.12 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr10 97896583 + NM_001330734 ZNF518A 1 1.75 0.36 20 10.87 88.18 16 6.13 Yes 65 0.74 No 0 0 No -35 0.68 Yes 35 75.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97902587 + NM_001330734 ZNF518A 1 3.72 0.68 17 7.01 87.07 31 11.56 Yes 18 0.92 Yes 0 0 No -30 0.86 Yes 40 90.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 97916026 + NM_001330734 ZNF518A 1 2.52 0.72 34 8.4 84.55 31 5.74 Yes 63 -3.75 No 0 0 No -28 0.82 Yes 42 94.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 97917646 + NM_001330734 ZNF518A 1 0.87 0.24 15 9.61 95.35 44 5.19 No 5 0.76 No 23 0.86 Yes -23 0.71 Yes 41 80.59 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 53884000 + NM_001348156 ZNF525 1 1.31 0.29 18 -1.29 61.78 15 5.89 Yes 62 -1.65 No 0 0 No -47 0.47 No 23 62.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 53888222 + NM_001348156 ZNF525 1 0.74 0.18 11 10.05 88.15 25 5.61 Yes 51 0.78 Yes 29 0.71 Yes -29 0.6 No 41 59.08 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 37870384 + NM_032453 ZNF527 1 1.13 0.13 8 2.3 84.41 28 6.11 Yes 15 1.01 Yes 31 0.74 Yes -27 0.82 Yes 43 86.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 37870942 + NM_032453 ZNF527 1 1.02 0.13 8 4.23 68.78 22 5.29 No 71 1.52 Yes 28 0.76 Yes -21 0.79 Yes 49 64.6 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 37875769 + NM_032453 ZNF527 1 13.69 0.94 40 5 0 32 7.69 Yes 19 1.39 Yes 31 0.84 Yes -31 0.96 Yes 39 97.04 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 52905681 + NM_032423 ZNF528 1 6.03 0.99 37 2.9 0 43 6.79 Yes 67 0.07 No 42 0.46 Yes -42 0.79 Yes 28 83.29 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 37040260 - NM_020951 ZNF529 1 3.44 0.35 20 8.55 79.48 44 6.84 Yes 31 0.84 Yes 0 0 No -27 0.65 No 43 57.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 37042880 - NM_020951 ZNF529 1 82.85 8.29 72 6.91 84.01 42 6.03 Yes 13 1.14 Yes 25 0.87 Yes -25 0.95 Yes 45 94.4 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 37062571 - NM_020951 ZNF529 1 0.44 0.13 8 3.01 0 30 5.89 Yes 53 -1.52 No 0 0 No -27 0.43 No 38 60.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 58741318 + NM_001320781 ZNF544 1 1.44 0.82 38 9.65 90.88 11 5.04 No 66 -2.59 No 0 0 No -25 0.67 Yes 45 43.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 58755502 + NM_001320781 ZNF544 1 0.25 0.25 15 5.59 84.42 24 4.9 No 45 0.92 Yes 0 0 No -57 0.54 No 53 44.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 58757152 + NM_001320781 ZNF544 1 0.21 0.21 13 5.77 80.56 25 4.31 No 68 1.28 Yes 0 0 No -29 0.88 Yes 41 86.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58757708 + NM_001320781 ZNF544 1 0.11 0.13 8 3.77 80 27 4.91 No 48 0.88 Yes 22 0.82 Yes -27 0.28 No 55 28.96 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 58758076 + NM_001320781 ZNF544 1 179.61 59.89 72 9.69 84.76 25 5.57 Yes 58 -1.77 No 25 0.72 Yes -25 0.64 No 45 65.41 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 58758647 + NM_001320781 ZNF544 1 18.38 6.67 72 6.83 84.22 31 7.87 Yes 18 1.76 Yes 30 0.94 Yes -30 0.93 Yes 40 94.99 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 58764829 + NM_001320781 ZNF544 1 0.7 0.26 14 2.2 0 27 5.72 Yes 14 1.27 Yes 0 0 No -26 0.73 Yes 44 64.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 58764849 + NM_001320781 ZNF544 1 1.23 0.43 26 5.19 90.21 27 5.2 No 34 1.29 Yes 0 0 No -26 0.5 No 44 51.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 58770643 + NM_001320781 ZNF544 1 9.08 3.46 68 7.76 90.21 24 3.72 No 7 0.25 No 24 0.84 Yes -24 0.89 Yes 46 92.6 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 58772757 + NM_001320781 ZNF544 1 1.13 0.44 22 7.56 80.46 41 6.18 Yes 28 1.59 Yes 0 0 No -32 0.7 Yes 38 81.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58772921 + NM_001320781 ZNF544 1 4.88 1.93 53 7.99 77.43 25 5.39 No 12 0.54 No 0 0 No -24 0.93 Yes 46 88.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 57902089 + NM_001172773 ZNF548 1 27.45 3.08 69 1 62.47 45 7.06 Yes 32 0.14 No 44 0.54 Yes -44 0.78 Yes 26 83.39 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 57904168 + NM_001172773 ZNF548 1 1.58 0.21 12 6.27 87.47 16 4.69 No 60 -3.59 No 20 0.85 Yes -15 0.31 No 43 30.6 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 58055300 - NM_001277090 ZNF550 1 1.44 0.15 10 1.77 0 32 5.21 No 19 0.48 No 0 0 No -27 0.33 No 43 51.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 2851588 + NM_001172775 ZNF555 1 3.76 0.35 18 10.44 78.04 32 5.92 Yes 19 0.89 Yes 0 0 No -31 0.94 Yes 39 96.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7074200 + NM_024341 ZNF557 1 0.55 0.25 18 7.14 85.02 24 5.9 Yes 11 1.28 Yes 0 0 No -23 0.86 Yes 47 93.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 7075686 + NM_024341 ZNF557 1 55.84 19.99 72 8.23 84.22 24 5.48 No 25 1.28 Yes 23 0.75 Yes -23 0.83 Yes 47 86.76 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 8929120 - NM_144693 ZNF558 1 0.84 0.14 10 1.55 0 25 6.84 Yes 12 0.81 Yes 0 0 No -27 0.39 No 43 52.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8932312 - NM_144693 ZNF558 1 14.75 1.13 44 -6.65 71.24 53 7.42 Yes 40 1.03 Yes 0 0 No -52 0.86 Yes 18 97.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8932358 - NM_144693 ZNF558 1 6.87 0.54 26 -0.35 67.27 19 3.75 No 2 0.27 No 0 0 No -23 0.26 No 60 27.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8932747 - NM_144693 ZNF558 1 0.97 0.19 12 7.75 84.22 24 5.48 No 25 1.27 Yes 0 0 No -23 0.82 Yes 47 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8933536 - NM_144693 ZNF558 1 3.06 0.38 22 2.88 78.77 19 5.9 Yes 6 1.09 Yes 0 0 No -32 0.73 Yes 38 79.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 8933563 - NM_144693 ZNF558 1 9.31 1.04 46 0.12 0 14 4.47 No 69 -2.15 No 0 0 No -19 0.27 No 56 42.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 8941544 - NM_144693 ZNF558 1 2 0.17 10 3.6 81.04 27 4.34 No 33 1.09 Yes 0 0 No -50 0.41 No 20 65.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 8941562 - NM_144693 ZNF558 1 1.58 0.13 7 -5.28 0 9 3.87 No 15 1.11 Yes 0 0 No -32 0.72 Yes 43 66.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 9436810 + NM_001202412 ZNF559 1 2.41 0.17 9 3.97 84.41 31 6.72 Yes 23 1.84 Yes 0 0 No -35 0.61 No 35 85.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 9440790 + NM_001202412 ZNF559 1 2.24 0.11 7 11.34 88.7 21 5.83 Yes 58 1.43 Yes 0 0 No -27 0.75 Yes 43 84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 9443690 + NM_001202412 ZNF559 1 26.29 1.53 57 3.58 84.79 15 4.35 No 2 0.97 Yes 0 0 No -26 0.59 No 44 57.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 9727903 - NM_152289 ZNF561 1 9.5 5.1 69 7.68 85.34 31 5.03 No 0 0.42 No 25 0.72 Yes -25 0.78 Yes 45 66.72 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 9728435 - NM_152289 ZNF561 1 19.83 10.58 72 0.24 0 20 3.42 No 51 0.41 No 21 0.55 Yes -15 0.73 Yes 55 66.26 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 9728445 - NM_152289 ZNF561 1 8.35 4.53 68 3.84 80.28 35 6.24 Yes 41 0.41 No 21 0.55 Yes -21 0.48 No 49 35.79 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 9728843 - NM_152289 ZNF561 1 8.01 4.4 70 6.23 93.01 19 4.68 No 24 1.59 Yes 23 0.93 Yes -36 0.92 Yes 34 90.53 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 9730206 - NM_152289 ZNF561 1 0.6 0.26 17 6.55 77.07 11 5.29 No 72 0.6 No 26 0.49 Yes -21 0.53 No 49 49.39 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 9731640 - NM_152289 ZNF561 1 1.99 0.82 35 7.99 89.6 30 7.61 Yes 17 0.53 No 29 0.94 Yes -29 0.81 Yes 41 89.18 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 9731726 - NM_152289 ZNF561 1 5.65 2.58 65 8.42 89.3 20 4.18 No 18 0.77 No 30 0.84 Yes -19 0.59 No 40 71.85 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr19 9731765 - NM_152289 ZNF561 1 0.58 0.32 19 3.58 70.8 20 5.74 Yes 58 0.46 No 30 0.84 Yes -19 0.81 Yes 51 68.22 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 9738388 + NR_122038 ZNF561-AS1 1 0.99 0.24 12 3.6 85.02 17 5.29 No 4 1.05 Yes 19 0.63 Yes -16 0.42 No 54 67.61 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 9738391 + NR_122038 ZNF561-AS1 1 1.81 0.24 14 2.24 80.12 20 5.57 Yes 7 1.02 Yes 19 0.63 Yes -19 0.62 No 51 76.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 9738388 + NR_122038 ZNF561-AS1 1 1.28 0.24 12 3.6 85.02 17 5.29 No 4 1.05 Yes 19 0.63 Yes -16 0.42 No 54 67.61 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 9738391 + NR_122038 ZNF561-AS1 1 3.09 0.54 26 2.24 80.12 20 5.57 Yes 7 1.02 Yes 19 0.63 Yes -19 0.62 No 51 76.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 9764555 - NM_001130032 ZNF562 1 32.11 14.35 71 5.07 79.75 36 6.74 Yes 65 0.91 Yes 32 0.54 Yes -35 0.48 No 40 70.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 9764555 - NM_001130032 ZNF562 1 1.87 0.86 38 5.07 79.75 36 6.74 Yes 65 0.91 Yes 32 0.54 Yes -35 0.48 No 40 70.8 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 9768867 - NM_001130032 ZNF562 1 5.21 1.4 53 9.03 85.34 32 5.11 No -3 0.13 No 0 0 No -26 0.81 Yes 44 72.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 9768867 - NM_001130032 ZNF562 1 1.25 0.35 19 9.03 85.34 32 5.11 No -3 0.13 No 0 0 No -26 0.81 Yes 44 72.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 9768966 - NM_001130032 ZNF562 1 8.09 2.28 60 2.81 76.62 17 5.01 No -3 0.7 No 0 0 No -24 0.66 No 46 80.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 12430126 - NM_145276 ZNF563 1 3.65 0.61 30 7.62 90.91 20 5 No 7 1.13 Yes 19 0.85 Yes -19 0.76 Yes 51 81.3 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12430126 - NM_145276 ZNF563 1 1.28 0.17 12 7.62 90.91 20 5 No 7 1.13 Yes 19 0.85 Yes -19 0.76 Yes 51 81.3 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12430480 - NM_145276 ZNF563 1 23.64 4.46 65 4.08 78.33 24 5.22 No 11 0.59 No 26 0.83 Yes -24 0.41 No 44 63.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 12430480 - NM_145276 ZNF563 1 0.75 0.15 10 4.08 78.33 24 5.22 No 11 0.59 No 26 0.83 Yes -24 0.41 No 44 63.43 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 12652352 - NM_144976 ZNF564 1 2.04 0.22 15 2.56 0 35 7.04 Yes 22 1.58 Yes 34 0.71 Yes -34 0.61 No 36 87.26 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 12659677 - NM_144976 ZNF564 1 0.88 0.15 10 9.08 94.91 21 6.08 Yes 8 0.99 Yes 20 0.55 Yes -20 0.51 No 49 35.54 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 12661467 - NM_144976 ZNF564 1 0.9 0.15 9 11.39 95.65 43 6.86 Yes 44 0.72 No 42 0.41 Yes -42 0.34 No 44 55.53 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 36963912 - NM_032838 ZNF566 1 40.06 3.13 64 1.24 76.41 34 5.11 No 21 0.96 Yes 33 0.86 Yes -33 0.89 Yes 37 93.84 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 37183293 + NM_001322913 ZNF567 1 6.36 0.96 42 10.61 87.72 34 6.13 Yes 10 1.39 Yes 0 0 No -22 0.63 No 48 64.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 37203494 + NM_001322913 ZNF567 1 2.19 0.68 32 7.92 85.95 25 6.11 Yes 42 -1.85 No 0 0 No -24 0.82 Yes 46 93.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 37422454 + NM_001204839 ZNF568 1 0.98 0.11 8 8.01 85.51 27 7.61 Yes 14 1.43 Yes 26 0.89 Yes -26 0.94 Yes 44 95.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 37422454 + NM_001204839 ZNF568 1 8.06 0.99 44 8.01 85.51 27 7.61 Yes 14 1.43 Yes 26 0.89 Yes -26 0.94 Yes 44 95.57 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 2917089 + NM_001319083 ZNF57 1 1.06 0.14 9 8.67 83.87 24 6.08 Yes 11 1.03 Yes 0 0 No -23 0.93 Yes 47 97.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 38261238 - NM_152360 ZNF573 1 38.57 6.46 71 10.07 88.27 30 7.42 Yes 17 1.69 Yes 29 0.91 Yes -29 0.83 Yes 41 90.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 44101248 + NM_001145347 ZNF576 1 14.51 7.92 72 1.52 73.04 27 5.25 No -4 0.74 No 0 0 No -26 0.92 Yes 44 89.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 44103030 + NM_001145347 ZNF576 1 0.29 0.17 10 8.95 82.43 32 5.11 No 58 2.49 Yes 0 0 No -25 0.77 Yes 45 80.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56091509 - NM_152600 ZNF579 1 2.22 0.28 15 7.34 76.57 30 6.93 Yes 17 2.39 Yes 0 0 No -29 0.83 Yes 41 90.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56925710 + NM_001159860 ZNF583 1 7.34 0.69 34 3.27 80.73 24 6.39 Yes 11 1.61 Yes 26 0.92 Yes -23 0.81 Yes 47 79.59 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 56932799 + NM_001159860 ZNF583 1 8.07 0.79 37 7.26 87.53 24 5.76 Yes -1 1.31 Yes 0 0 No -23 0.75 Yes 47 62.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 58927159 + NM_173548 ZNF584 1 1.64 0.29 14 1.62 70.27 52 7.84 Yes 39 1.79 Yes 41 0.64 Yes -41 0.44 No 29 86.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 58927185 + NM_173548 ZNF584 1 7.33 1.4 51 6.4 82.04 15 4.32 No 65 1.78 Yes 28 0.61 Yes -28 0.55 No 50 70.3 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 58927248 + NM_173548 ZNF584 1 1.17 0.24 13 9.36 84.78 26 8.33 Yes 13 1.07 Yes 0 0 No -25 0.96 Yes 45 96.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 37641782 - NM_001288800 ZNF585A 1 2.4 0.19 9 8.1 83.51 25 5.57 Yes 38 1.36 Yes 24 0.88 Yes -24 0.89 Yes 46 87.31 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 37662940 - NM_001288800 ZNF585A 1 0.34 0.17 10 10.76 86.99 26 5.62 Yes 38 -2.45 No 0 0 No -25 0.83 Yes 45 89.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48290616 + NM_016089 ZNF589 1 1.02 0.18 10 2.9 0 33 9.15 Yes 55 0.72 No 0 0 No -33 0.48 No 38 75.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 48292422 + NM_016089 ZNF589 1 5.62 1.11 39 6.76 85.02 25 5.75 Yes 43 0.79 Yes 0 0 No -24 0.67 Yes 46 60.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 48297005 + NM_016089 ZNF589 1 1.96 0.36 20 2.3 84.41 31 6.62 Yes 18 0.37 No 0 0 No -30 0.94 Yes 40 87.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48297028 + NM_016089 ZNF589 1 1.32 0.26 17 7.53 92.28 26 5.08 No 41 0.35 No 0 0 No -53 0.57 No 17 78.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 48298289 + NM_016089 ZNF589 1 1.06 0.25 15 4.76 73.08 20 6 Yes 41 -4.63 No 0 0 No -19 0.8 Yes 51 82.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 48298334 + NM_016089 ZNF589 1 14.46 2.78 68 -10.27 56.38 50 6.79 Yes -2 0.42 No 0 0 No -49 0.5 No 23 72.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 48309407 + NM_016089 ZNF589 1 0.22 0.1 7 6.38 90.43 26 6.96 Yes 13 1.62 Yes 22 0.92 Yes -25 0.92 Yes 45 94.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 48309407 + NM_016089 ZNF589 1 34.5 14 72 6.38 90.43 26 6.96 Yes 13 1.62 Yes 22 0.92 Yes -25 0.92 Yes 45 94.45 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 85311308 + NM_014630 ZNF592 1 0.47 0.21 11 8.64 88.27 36 6.16 Yes 23 1.35 Yes 0 0 No -29 0.49 No 35 47.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 85341792 + NM_014630 ZNF592 1 1.51 0.81 36 6.02 80.99 28 6.93 Yes 15 1.67 Yes 24 0.69 Yes -27 0.96 Yes 43 90.51 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr15 85344799 + NM_014630 ZNF592 1 2.3 1.35 59 6.33 90.94 21 5 No 69 0.29 No 0 0 No -23 0.37 No 52 37.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 192917 + NM_001287254 ZNF596 1 3.77 0.18 9 1.86 69.45 23 4.69 No 28 0.97 Yes 22 0.69 Yes -22 0.44 No 48 63.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 3489212 - NM_152457 ZNF597 1 1.22 0.1 7 10.19 92.63 35 6.93 Yes 60 -1.19 No 0 0 No -36 0.55 No 36 66.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2050878 - NM_178167 ZNF598 1 0.1 0.11 8 2.71 84.79 15 5.2 No 2 1.51 Yes 0 0 No -14 0.5 No 56 45.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 2051188 - NM_178167 ZNF598 1 0.44 0.43 23 -3.76 0 28 5.64 Yes 15 0.74 No 0 0 No -27 0.75 Yes 43 70.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 2051726 - NM_178167 ZNF598 1 0.91 1 40 -1.27 53.8 46 6.86 Yes 33 1.18 Yes 22 0.92 Yes -45 0.79 Yes 25 78.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 2052455 - NM_178167 ZNF598 1 8.7 9.47 71 0.82 69.4 13 5.74 Yes 0 1.21 Yes 23 0.79 Yes -12 0.41 No 58 38.14 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 2053118 - NM_178167 ZNF598 1 2.16 2.54 66 2.9 0 51 6.53 Yes 60 0.45 No 0 0 No -44 0.57 No 20 64.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 2054122 - NM_178167 ZNF598 1 0.72 0.54 27 1.78 74.4 38 7.83 Yes 30 -1.04 No 0 0 No -33 0.54 No 33 53.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 53283977 - NM_198457 ZNF600 1 0.9 0.22 13 0.37 86.77 39 6.95 Yes 26 0.32 No 0 0 No -32 0.51 No 32 56.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 53283979 - NM_198457 ZNF600 1 1.36 0.29 16 -2.43 83 37 6.82 Yes 24 0.33 No 0 0 No -30 0.52 No 34 55.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 53284178 - NM_198457 ZNF600 1 10.65 1.93 59 5.83 87.22 26 6.63 Yes 75 0.93 Yes 0 0 No -25 0.82 Yes 45 83.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53284309 - NM_198457 ZNF600 1 17.09 3.6 64 9.56 90.55 32 5.15 No 19 1.39 Yes 31 0.74 Yes -40 0.38 No 39 62.06 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 53284718 - NM_198457 ZNF600 1 33.86 4.76 45 -3.26 74.45 30 6.32 Yes 69 -3.37 No 37 0.17 Yes -29 0.5 No 41 69.16 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 53287252 - NM_198457 ZNF600 1 5.63 1.11 40 10.1 84.73 21 6.12 Yes 8 1.27 Yes 0 0 No -20 0.89 Yes 50 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 133519609 - NM_001164715 ZNF605 1 13.66 0.89 44 11.18 86.4 23 5.14 No 10 1.62 Yes 0 0 No -22 0.65 No 48 69.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 58491669 - NM_025027 ZNF606 1 1.34 0.14 7 8.17 76.6 25 7.68 Yes 12 1.87 Yes 25 0.9 Yes -24 0.55 No 46 69.15 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 38197482 - NM_001172677 ZNF607 1 3.25 0.42 21 5.4 83.31 26 5.75 Yes 13 1.02 Yes 0 0 No -25 0.89 Yes 45 67.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 38197485 - NM_001172677 ZNF607 1 5.62 0.81 36 5.74 81.7 23 5.55 No 10 1.03 Yes 22 0.76 Yes -22 0.85 Yes 48 67.32 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 38198914 - NM_001172677 ZNF607 1 22.35 3.71 67 2.02 79.32 37 6.93 Yes 72 1.51 Yes 0 0 No -36 0.81 Yes 34 75.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 123979359 - NM_020747 ZNF608 1 0.55 0.11 8 7.24 93.65 27 5.2 No 71 0.99 Yes 0 0 No -26 0.7 Yes 50 59.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 64853931 + NM_015042 ZNF609 1 0.42 0.38 23 9.07 90.22 13 5.23 No 0 1.82 Yes 0 0 No -25 0.41 No 39 51.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 64929771 + NM_015042 ZNF609 1 0.54 0.39 19 8.6 84.84 26 6.5 Yes 13 1.45 Yes 0 0 No -25 0.78 Yes 45 82.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 64973522 + NM_015042 ZNF609 1 0.25 0.13 8 7.04 89.42 22 4.83 No 25 1.85 Yes 0 0 No -21 0.88 Yes 49 83.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53210792 - NM_001161500 ZNF611 1 1.2 0.13 8 2.2 0 26 7 Yes 13 1.54 Yes 21 0.79 Yes -25 0.67 Yes 41 56.73 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr19 53210796 - NM_001161500 ZNF611 1 119.18 11.24 72 13.35 92.63 22 6.71 Yes 9 1.57 Yes 21 0.79 Yes -21 0.58 No 45 63.73 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 53210796 - NM_001161500 ZNF611 1 1.52 0.14 10 13.35 92.63 22 6.71 Yes 9 1.57 Yes 21 0.79 Yes -21 0.58 No 45 63.73 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 53219487 - NM_001161500 ZNF611 1 2.19 0.71 29 4.49 80.24 22 4.8 No 31 1.15 Yes 21 0.93 Yes -21 0.89 Yes 49 91.88 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 53224521 - NM_001161500 ZNF611 1 3.29 0.96 42 5.15 73.1 37 5.69 Yes 24 0.37 No 29 0.35 Yes -29 0.67 Yes 41 83.85 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 53224635 - NM_001161500 ZNF611 1 0.59 0.17 8 1.5 80.92 24 5.05 No 74 1.79 Yes 0 0 No -23 0.95 Yes 47 96.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53227243 - NM_001161500 ZNF611 1 1.16 0.32 21 7.7 92.53 28 7.46 Yes 73 -0.61 No 27 0.47 Yes -28 0.37 No 43 41.82 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 53230592 - NM_001161500 ZNF611 1 0.28 0.11 7 6.7 76.86 37 4.85 No 18 2.02 Yes 0 0 No -36 0.59 No 34 77.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 52431147 + NM_001031721 ZNF613 1 9.95 1.63 49 5.74 84.17 27 5.39 No 21 -1.04 No 26 0.9 Yes -26 0.78 Yes 44 61.25 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 52445977 + NM_001031721 ZNF613 1 0.69 0.11 8 7.69 92.41 31 6.56 Yes 18 1.47 Yes 25 0.72 Yes -30 0.57 No 40 83.17 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 52520951 - NM_025040 ZNF614 1 43.47 11.28 72 11.22 88.27 24 5.36 No 11 0.84 Yes 23 0.89 Yes -23 0.72 Yes 47 86.9 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 52524977 - NM_025040 ZNF614 1 0.32 0.13 7 2.74 0 33 6.61 Yes 35 0.73 No 0 0 No -36 0.79 Yes 34 92.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 52625711 - NM_178523 ZNF616 1 20.11 2.64 62 6.85 93.18 28 5.8 Yes 54 1.01 Yes 27 0.83 Yes -27 0.84 Yes 43 75.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 52629035 - NM_178523 ZNF616 1 1.23 0.15 9 10.22 87.01 24 6.4 Yes 11 2.6 Yes 0 0 No -23 0.88 Yes 47 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 52642880 - NM_178523 ZNF616 1 11.11 1.53 52 4.12 79.5 24 5.89 Yes 50 0.93 Yes 0 0 No -23 0.84 Yes 47 80.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 40519416 + NM_001145083 ZNF619 1 1.24 0.19 13 5.19 0 11 4.12 No 14 0.66 No 0 0 No -26 0.98 Yes 44 96.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 40525143 + NM_001145083 ZNF619 1 9.02 1.67 60 1.71 0 35 4.2 No 76 -1.69 No 34 0.74 Yes -30 0.72 Yes 40 74.35 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr3 40525164 + NM_001145083 ZNF619 1 1.05 0.19 10 5.33 93.95 28 4.87 No 3 0.58 No 27 0.82 Yes -27 0.35 No 19 41 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 40570985 + NM_198484 ZNF621 1 6.85 1.28 46 7.65 85.3 22 5.1 No 9 1.17 Yes 21 0.93 Yes -21 0.87 Yes 49 89.89 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 40571702 + NM_198484 ZNF621 1 1.25 0.26 17 2.65 68.47 32 7.59 Yes 19 1.09 Yes 0 0 No -31 0.92 Yes 39 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 40571702 + NM_198484 ZNF621 1 1.28 0.28 17 2.65 68.47 32 7.59 Yes 19 1.09 Yes 0 0 No -31 0.92 Yes 39 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12266605 - NR_037802 ZNF625-ZNF20 1 2.59 0.35 20 1.79 0 24 5.17 No 68 -3.04 No 0 0 No -23 0.59 No 47 54.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 12266610 - NR_037802 ZNF625-ZNF20 1 3.95 0.53 29 4.04 90.83 19 4.66 No 63 -3.03 No 0 0 No -18 0.56 No 52 52.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 20828565 - NM_001076675 ZNF626 1 0.57 0.15 10 1.31 0 31 4.27 No 4 0.35 No 0 0 No -30 0.42 No 40 39.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 20828569 - NM_001076675 ZNF626 1 0.57 0.13 9 0.92 75.19 27 3.97 No 0 0.36 No 0 0 No -26 0.57 No 44 51.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 71561630 + NM_014497 ZNF638 1 0.42 0.19 13 5.28 74.89 21 5.72 Yes 34 1.38 Yes 31 0.81 Yes -31 0.46 No 43 71.28 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 71575556 + NM_014497 ZNF638 1 0.28 0.13 8 9.33 91.39 26 6.13 Yes 13 1.32 Yes 25 0.75 Yes -25 0.62 No 45 84.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 71588162 + NM_014497 ZNF638 1 0.16 0.31 16 3.52 82.57 36 6.07 Yes 23 0.25 No 0 0 No -23 0.4 No 44 51.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 71591140 + NM_014497 ZNF638 1 0.06 0.11 8 7.56 83.81 25 4.46 No 76 1.72 Yes 0 0 No -24 0.72 Yes 46 90.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 71592562 + NM_014497 ZNF638 1 0.84 1.14 44 0.36 0 46 6.91 Yes 33 0.63 No 0 0 No -34 0.36 No 36 56.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 71594433 + NM_014497 ZNF638 1 0.32 0.36 20 6.56 90.93 32 6 Yes 43 0.08 No 0 0 No -29 0.31 No 41 37.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 71602439 + NM_014497 ZNF638 1 0.18 0.21 12 5.56 84.45 25 5.38 No 19 0.15 No 24 0.68 Yes -31 0.39 No 39 46.85 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 71607645 + NM_014497 ZNF638 1 0.34 0.57 27 0.26 70.65 26 6.19 Yes 13 1.18 Yes 0 0 No -25 0.58 No 45 45.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 71607967 + NM_014497 ZNF638 1 0.69 0.88 40 8.74 84.08 24 5.28 No 11 0.36 No 23 0.91 Yes -23 0.64 No 47 86.35 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 71608605 + NM_014497 ZNF638 1 0.17 0.26 13 3.17 0 19 3.97 No 49 -4.76 No 0 0 No -18 0.81 Yes 52 72.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 71611888 + NM_014497 ZNF638 1 0.15 0.24 12 11.69 90.7 31 6.63 Yes 18 0.84 Yes 0 0 No -30 0.49 No 42 68.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 71614022 + NM_014497 ZNF638 1 0.18 0.25 15 7.35 92.61 52 6.4 Yes 48 1.05 Yes 0 0 No -52 0.72 Yes 18 66.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 71615542 + NM_014497 ZNF638 1 0.44 0.64 29 7.58 85.7 68 7.51 Yes 55 1.53 Yes 22 0.89 Yes -22 0.53 No 43 54.52 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 71615635 + NM_014497 ZNF638 1 0.19 0.29 13 -1.44 60.89 27 6.31 Yes 15 -2.55 No 0 0 No -30 0.48 No 40 25.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 71615752 + NM_014497 ZNF638 1 5.17 7.18 71 4.33 73.92 50 8.12 Yes 37 1.59 Yes 26 0.51 Yes -49 0.7 Yes 21 89.73 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 71620523 + NM_014497 ZNF638 1 0.49 0.74 33 8.36 82.36 28 6.24 Yes 29 1.25 Yes 27 0.36 Yes -25 0.63 No 45 73.07 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 71623794 + NM_014497 ZNF638 1 0.31 0.35 22 4.12 75.01 15 5.9 Yes 44 0.37 No 0 0 No -23 0.69 Yes 47 65.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 71625839 + NM_014497 ZNF638 1 0.21 0.26 14 -9.5 0 16 4.24 No 18 0.94 Yes 0 0 No -30 0.75 Yes 40 82.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 71627227 + NM_014497 ZNF638 1 0.48 1.01 49 -2.16 68.35 19 4.69 No 48 0.08 No 20 0.72 Yes -43 0.57 No 36 27.31 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 71628340 + NM_014497 ZNF638 1 0.24 0.28 14 12.49 85.07 26 6.28 Yes 13 1.62 Yes 0 0 No -25 0.65 No 45 71.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 71645729 + NM_014497 ZNF638 1 0.23 0.4 22 -6.32 0 22 5.8 Yes 60 0.39 No 23 0.8 Yes -21 0.83 Yes NA NA NA BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 71655660 + NM_014497 ZNF638 1 0.2 0.35 17 -5.1 0 19 4.47 No 59 -4.01 No 18 0.71 Yes -42 0.28 No 28 36.71 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 71660357 + NM_014497 ZNF638 1 1 1.42 51 9.22 89.53 43 6.93 Yes 30 0.22 No 0 0 No -23 0.39 No 28 47.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 179045368 + NM_016331 ZNF639 1 0.23 0.11 7 7.03 90.62 25 5.32 No 32 1.33 Yes 0 0 No -24 0.94 Yes 46 97.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179046588 + NM_016331 ZNF639 1 0.69 0.65 33 3.01 0 36 6.74 Yes 23 1.16 Yes 0 0 No -27 0.35 No 35 55.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 179047469 + NM_016331 ZNF639 1 0.23 0.19 12 6.81 77.74 30 6.75 Yes 1 1.29 Yes 0 0 No -29 0.85 Yes 41 86.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 179047721 + NM_016331 ZNF639 1 1.68 2.15 58 4.74 84.41 32 5.18 No 19 1.39 Yes 31 0.88 Yes -31 0.73 Yes 39 71.91 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr3 179051038 + NM_016331 ZNF639 1 0.11 0.13 7 -1.75 0 16 4.37 No 46 0.53 No 22 0.73 Yes -19 0.45 No 51 52.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 91385864 - NM_201269 ZNF644 1 0.3 0.29 18 6.69 89.27 25 6.37 Yes 12 0.75 No 0 0 No -25 0.72 Yes 45 58.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 91401088 - NM_201269 ZNF644 1 6.83 5.85 72 6.05 78.53 23 5.2 No 34 0.3 No 24 0.58 Yes -20 0.54 No 50 73.2 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 91409896 - NM_201269 ZNF644 1 0.45 0.42 22 4.91 73.4 50 6.27 Yes 73 0.37 No 0 0 No -34 0.74 Yes 36 79.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 91411852 - NM_201269 ZNF644 1 0.36 0.26 13 8.2 81.56 24 5.2 No 73 1.62 Yes 0 0 No -23 0.84 Yes 47 85.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 91438771 - NM_201269 ZNF644 1 0.75 0.63 35 11.29 90.79 24 9.78 Yes 11 2.11 Yes 23 0.9 Yes -23 0.5 No 47 81.64 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 91486759 - NM_201269 ZNF644 1 20 5.86 71 9.1 96.33 20 5 No 7 0.93 Yes 19 0.85 Yes -19 0.57 No 47 53.61 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 91487359 - NM_201269 ZNF644 1 1.76 0.44 26 3.81 89.04 24 4.58 No NA NA NA 0 0 No -24 0.48 No 46 52.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31093787 + NM_014699 ZNF646 1 1.56 0.13 7 2.99 80.72 16 3.05 No 14 0.48 No 0 0 No -22 0.75 Yes 48 77.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 52403166 - NM_023074 ZNF649 1 1.08 0.29 13 4.48 78.75 22 6.08 Yes 30 -2.17 No 21 0.73 Yes -24 0.71 Yes 49 71.82 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 52407499 - NM_023074 ZNF649 1 1.64 0.39 16 2.87 82.05 21 5.1 No 39 -4.23 No 20 0.73 Yes -20 0.58 No 50 56.58 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 47380297 - NR_135579 ZNF652 1 0.66 0.19 12 4.94 84.17 27 5.2 No 53 0.23 No 0 0 No -26 0.62 No 10 65.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 47380321 - NR_135579 ZNF652 1 0.48 0.15 9 3.24 83.04 42 7.28 Yes 29 0.23 No 0 0 No -36 0.55 No 34 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 11611631 - NM_138783 ZNF653 1 2.24 0.22 15 7.75 87.39 31 5.76 Yes 28 1.73 Yes 30 0.61 Yes -21 0.48 No 52 63.43 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 99159510 + NM_001085368 ZNF655 1 513.52 65.21 72 9.75 85.09 28 6.33 Yes 15 2.02 Yes 27 0.94 Yes -27 0.96 Yes 43 95.89 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 99159863 + NM_001085368 ZNF655 1 0.88 0.14 9 9.8 85.22 19 3.99 No 34 0.64 No 0 0 No -25 0.73 Yes 45 71.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 99159990 + NM_001085368 ZNF655 1 77.76 10.35 72 3.35 87.54 18 4.9 No 57 0.66 No 26 0.88 Yes -21 0.55 No 49 55.93 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 99161485 + NM_001085368 ZNF655 1 84.12 10.71 72 7.37 89.25 38 6.62 Yes -2 0.67 No 37 0.66 Yes -37 0.75 Yes 45 78.43 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 99168882 + NM_001085368 ZNF655 1 5.66 0.82 38 7.85 95.17 16 5.15 No 3 1.54 Yes 26 0.74 Yes -30 0.71 Yes 40 80.36 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr9 40789481 - NM_033160 ZNF658 1 29.76 1.71 53 8.34 92.17 15 4.37 No 2 0.72 No 23 0.9 Yes -23 0.85 Yes 47 58.62 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr12 124487965 + NM_152437 ZNF664 1 0.5 0.53 30 2.3 84.41 29 7.07 Yes 16 1.36 Yes 32 0.84 Yes -28 0.9 Yes 42 90.48 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 124487969 + NM_152437 ZNF664 1 4.01 4.04 70 3.01 0 33 7.35 Yes 20 1.34 Yes 32 0.84 Yes -32 0.9 Yes 38 89.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr12 124488039 + NM_152437 ZNF664 1 0.2 0.24 15 7.55 89.75 22 5.72 Yes 9 0.45 No 0 0 No -21 0.78 Yes 49 89.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr12 124489100 + NM_152437 ZNF664 1 0.24 0.28 17 7.76 76.88 38 6.31 Yes -2 0.14 No 0 0 No -33 0.56 No 37 49.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr12 124489424 + NM_152437 ZNF664 1 11.18 11.5 72 8.35 76.46 39 5.82 Yes 19 1.28 Yes 31 0.85 Yes -31 0.63 No 39 78.11 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 247159484 - NR_037894 ZNF670-ZNF695 1 4.33 0.4 21 7.28 85.02 27 7.62 Yes 14 1.5 Yes 0 0 No -26 0.94 Yes 44 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 249140389 + NM_024836 ZNF672 1 1.06 1.11 46 7.3 91.72 27 4.6 No 58 -2.76 No 0 0 No -26 0.93 Yes 44 95.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 249141373 + NM_024836 ZNF672 1 1.94 2.03 55 11.41 84.9 42 6.54 Yes 34 0.43 No 22 0.46 Yes -41 0.74 Yes 43 69.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 23839625 - NM_138330 ZNF675 1 1.15 0.43 22 8.74 87.01 29 9.22 Yes 16 1.15 Yes 28 0.84 Yes -28 0.65 No 42 64.71 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 23841475 - NM_138330 ZNF675 1 6.72 2.65 65 3.07 0 27 5.73 Yes 14 0.24 No 27 0.43 Yes -34 0.68 Yes 36 78.83 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 23843169 - NM_138330 ZNF675 1 1.64 0.65 30 6.92 74.37 23 6.82 Yes 10 1.41 Yes 0 0 No -22 0.64 No 48 65.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 23865989 - NM_138330 ZNF675 1 0.44 0.18 11 4.67 84.41 21 5.61 Yes 23 1.35 Yes 0 0 No -28 0.81 Yes 42 83.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 63986896 - NM_178558 ZNF680 1 6.43 1.33 48 7.44 89.01 31 5.66 Yes 26 0.57 No 30 0.87 Yes -30 0.88 Yes 40 93.72 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 63988260 - NM_178558 ZNF680 1 1.09 0.18 9 8.16 89.94 15 4.44 No 2 1.11 Yes 0 0 No -29 0.88 Yes 41 92.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 63996315 - NM_178558 ZNF680 1 6.37 1.15 48 2.85 0 40 9.33 Yes 27 1.14 Yes 0 0 No -35 0.87 Yes 35 90.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 63996319 - NM_178558 ZNF680 1 1.01 0.19 9 2.05 83 36 9.16 Yes 23 1.15 Yes 0 0 No -31 0.9 Yes 39 89.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 64002296 - NM_178558 ZNF680 1 4.88 0.96 41 9.14 82.49 22 5.74 Yes 35 0.1 No 0 0 No -26 0.66 No 44 75.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 64004580 - NM_178558 ZNF680 1 2.98 0.96 37 -0.22 0 13 3.87 No 53 1.18 Yes 0 0 No -28 0.67 Yes 42 46.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 64004586 - NM_178558 ZNF680 1 1.66 0.51 21 -13.67 60.24 60 8.04 Yes 47 1.18 Yes 0 0 No -22 0.43 No 38 35.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 64021652 - NM_178558 ZNF680 1 7.47 1.33 50 11.17 94.31 33 5.53 No 23 0.34 No 26 0.58 Yes -26 0.76 Yes 44 76.59 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 23929884 - NM_138286 ZNF681 1 2.31 0.31 16 6.06 92.61 27 5.39 No 42 0.94 Yes 0 0 No -26 0.66 No 16 79.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 23929904 - NM_138286 ZNF681 1 4.69 0.6 28 3.22 0 35 7.19 Yes 22 0.92 Yes 0 0 No -34 0.88 Yes 36 95.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 23929908 - NM_138286 ZNF681 1 1.09 0.14 8 -0.84 77.85 31 6.96 Yes 18 0.93 Yes 0 0 No -30 0.88 Yes 40 94.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 23936660 - NM_138286 ZNF681 1 1.11 0.14 9 2.3 84.41 30 7.13 Yes 17 1.12 Yes 0 0 No -29 0.68 Yes 41 79.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 41010068 + NM_152373 ZNF684 1 13.36 2.47 60 2.87 0 48 7.21 Yes 35 0.68 No 29 0.03 Yes -47 0.52 No 23 66.69 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr1 41010087 + NM_152373 ZNF684 1 0.63 0.13 8 5.71 84.41 26 5.1 No 54 0.68 No 25 0.86 Yes -25 0.82 Yes 45 66.63 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 151261926 + NM_001304763 ZNF687 1 0.4 0.26 13 5.22 70.75 33 6.97 Yes 20 1.17 Yes 0 0 No -32 0.92 Yes 38 87.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 151262601 + NM_001304763 ZNF687 1 0.2 0.11 8 2.32 0 27 6.71 Yes 14 1.91 Yes 0 0 No -26 0.92 Yes 44 92.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 30582262 - NM_145271 ZNF688 1 2.49 0.72 35 0.75 0 19 4.47 No 54 -0.76 No 18 0.67 Yes -18 0.72 Yes 52 83.88 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 30582642 - NM_145271 ZNF688 1 1.63 0.28 19 0.86 66.67 27 6.32 Yes 14 1.69 Yes 26 0.91 Yes -26 0.89 Yes 44 87.36 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 249145147 - NM_001136036 ZNF692 1 3.04 1.65 51 5.02 80.36 24 6.78 Yes 40 0.64 No 23 0.9 Yes -23 0.9 Yes 47 89.85 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 249148202 - NM_001136036 ZNF692 1 2.69 1.35 49 5.67 87.86 25 5 No NA NA NA 0 0 No -24 0.57 No 46 81.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 249150143 - NM_001136036 ZNF692 1 9.4 2.88 65 5.01 76.96 34 6.7 Yes 21 1.26 Yes 30 0.83 Yes -33 0.77 Yes 37 91.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 249150143 - NM_001136036 ZNF692 1 0.84 0.28 14 5.01 76.96 34 6.7 Yes 21 1.26 Yes 30 0.83 Yes -33 0.77 Yes 37 91.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 249150584 - NM_001136036 ZNF692 1 2.05 0.94 44 6.32 89.84 24 5 No 51 0.35 No 0 0 No -23 0.47 No 47 38.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 249151636 - NM_001136036 ZNF692 1 5.62 0.88 41 9.46 82.28 11 6.16 Yes 71 2.1 Yes 28 0.65 Yes -31 0.78 Yes 39 79.01 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr1 249152217 - NM_001136036 ZNF692 1 5.47 0.54 25 8 89.62 20 5.09 No 7 0.72 No 33 0.4 Yes -25 0.62 No 45 73.36 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr1 249152234 - NM_001136036 ZNF692 1 6.66 0.68 30 11.17 92.48 34 6.32 Yes NA NA NA 33 0.4 Yes -33 0.77 Yes 37 87.76 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 249152265 - NM_001136036 ZNF692 1 1.91 0.25 12 5.09 0 15 4.58 No 50 -3.03 No 24 0.65 Yes -21 0.78 Yes 49 64.15 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 144377548 + NM_030895 ZNF696 1 6.78 0.71 33 4.72 82.93 19 7.12 Yes 6 0.09 No 27 0.34 Yes -25 0.76 Yes 45 81.73 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr8 146063392 + NM_001282797 ZNF7 1 0.36 0.11 8 5.99 88.6 28 5.1 No 62 0.2 No 23 0.7 Yes -23 0.7 Yes 47 65.72 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 146067203 + NM_001282797 ZNF7 1 1.66 0.46 25 6.04 87.12 12 4.07 No -1 0.78 Yes 26 0.45 Yes -26 0.54 No 44 52.78 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 102212324 - NM_001267709 ZNF706 1 0.01 0.13 8 -10.95 0 37 6.08 Yes 46 1.2 Yes 28 0.75 Yes -30 0.53 No NA NA NA BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 102212352 - NM_001267709 ZNF706 1 0.3 2.79 68 -1.14 0 31 6.26 Yes 18 1.19 Yes 30 0.82 Yes -30 0.82 Yes 40 84.5 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr8 144773766 + NM_001288805 ZNF707 1 6.03 0.5 28 2.27 80.53 27 5.39 No 35 1.46 Yes 26 0.77 Yes -22 0.28 No 48 57.46 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr8 144774092 + NM_001288805 ZNF707 1 0.48 0.1 7 -2.35 62.01 32 5.78 Yes 62 -2.3 No 0 0 No -31 0.72 Yes 39 68.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 144774170 + NM_001288805 ZNF707 1 0.59 0.15 9 -2.73 0 15 4.47 No 9 0.67 No 21 0.76 Yes -21 0.67 Yes 49 54.75 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr8 144774414 + NM_001288805 ZNF707 1 6.76 1.64 54 9.81 84.63 33 5.79 Yes 49 -1.02 No 32 0.84 Yes -32 0.8 Yes 41 85.23 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 21484891 - NM_021269 ZNF708 1 0.54 0.22 11 8.25 89.01 31 7.13 Yes 12 0.62 No 0 0 No -30 0.85 Yes 40 90.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 21489744 - NM_021269 ZNF708 1 2.8 1.11 51 3.44 83.95 25 4.43 No 57 -3.63 No 24 0.63 Yes -24 0.49 No 46 42.16 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 21492123 - NM_021269 ZNF708 1 1.56 0.51 26 8.81 73.87 31 4.27 No 34 1.02 Yes 0 0 No -30 0.41 No 40 43.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 21510944 - NM_021269 ZNF708 1 131.7 15.94 72 7.96 93.59 21 4.88 No 72 1.73 Yes 20 0.93 Yes -20 0.96 Yes 50 96.37 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 12577365 - NM_152601 ZNF709 1 1.5 0.17 10 8.1 71.49 26 6.12 Yes 13 0.71 No 0 0 No -25 0.9 Yes 45 89.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 12592010 - NM_152601 ZNF709 1 1.45 0.11 8 7.69 91.14 24 5.18 No 41 -1.98 No 0 0 No -24 0.52 No 47 60.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 57121332 + NM_021216 ZNF71 1 2.29 0.33 19 8.89 89.78 22 6.81 Yes -1 0.44 No 21 0.72 Yes -21 0.89 Yes 49 84.07 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 57125179 + NM_021216 ZNF71 1 13.99 1.9 57 11.36 95.76 26 5.64 Yes 71 1.65 Yes 23 0.56 Yes -25 0.79 Yes 45 59.97 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 90617853 + NM_198526 ZNF710 1 2.4 1.13 39 10.02 88.9 39 6.13 Yes 63 1.3 Yes 0 0 No -18 0.57 No 52 68.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 90618983 + NM_198526 ZNF710 1 0.44 0.15 9 11.02 92.15 24 5.48 No 74 1.19 Yes 0 0 No -23 0.92 Yes 47 96.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 21273712 + NM_182515 ZNF714 1 0.54 0.13 7 2.3 84.41 45 8.12 Yes 51 1.42 Yes 40 0.03 Yes -44 0.95 Yes 26 95.78 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 21273716 + NM_182515 ZNF714 1 9.63 2.29 55 4.19 0 49 8.37 Yes 55 1.41 Yes 40 0.03 Yes -48 0.95 Yes 22 95.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 21281265 + NM_182515 ZNF714 1 3.27 0.65 34 8.63 84.7 18 4.78 No 29 1.44 Yes 0 0 No -29 0.87 Yes 41 85.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 21281620 + NM_182515 ZNF714 1 75.13 16.46 72 3.17 80.81 26 5.35 No 60 -3.14 No 22 0.83 Yes -25 0.7 Yes 45 76.23 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 21287466 + NM_182515 ZNF714 1 2.98 0.47 28 6.75 87.02 26 4.51 No 3 0.94 Yes 0 0 No -25 0.49 No 45 61.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 21292428 + NM_182515 ZNF714 1 2.27 0.38 23 7.62 92.99 51 5.34 No 47 0.58 No 27 0.59 Yes -32 0.29 No 43 36.5 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 21299169 + NM_182515 ZNF714 1 0.59 0.14 8 6.08 86.34 30 7.07 Yes 44 1 Yes 0 0 No -30 0.71 Yes 40 84.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 21299634 + NM_182515 ZNF714 1 50.42 8.85 72 8.57 91.18 25 5.51 No 34 0.77 Yes 24 0.76 Yes -24 0.86 Yes 46 85.22 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 21307763 + NM_182515 ZNF714 1 1.73 0.29 19 10.53 89.4 36 7.23 Yes 62 0.81 Yes 0 0 No -31 0.42 No 35 46.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 75791017 - NM_001290208 ZNF717 1 17.16 2.9 61 2.77 84.39 27 5.26 No 40 -2.87 No 26 0.76 Yes -26 0.75 Yes 44 56.75 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 31725405 + NM_001130913 ZNF720 1 1.77 0.5 26 7.88 86.77 26 5 No 13 0.06 No 0 0 No -25 0.58 No 49 47.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31725687 + NM_001130913 ZNF720 1 1.3 0.4 22 4.5 67.44 29 6.23 Yes 53 0.74 No 28 0.85 Yes -32 0.61 No 42 77.87 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 31730233 + NM_001130913 ZNF720 1 3.84 1.25 42 7.15 89.11 31 5.61 Yes 5 1.25 Yes 0 0 No -30 0.55 No 40 70.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 31730277 + NM_001130913 ZNF720 1 0.44 0.11 8 7.54 83.99 28 5.48 No 49 1.21 Yes 0 0 No -27 0.86 Yes 43 75.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31744887 + NM_001130913 ZNF720 1 0.49 0.25 16 7.07 83.85 35 6.42 Yes 22 0.52 No 0 0 No -34 0.53 No 39 59.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31734381 + NM_001130913 ZNF720 1 5.29 4.21 70 7.34 79.47 27 8.34 Yes 14 1.51 Yes 0 0 No -26 0.77 Yes 44 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 31744887 + NM_001130913 ZNF720 1 4.39 2.39 65 7.07 83.85 35 6.42 Yes 22 0.52 No 0 0 No -34 0.53 No 39 59.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 31747858 + NM_001130913 ZNF720 1 0.41 0.21 13 10.11 85.05 27 7.28 Yes 14 1.11 Yes 0 0 No -29 0.72 Yes 41 67.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 31765759 + NM_001130913 ZNF720 1 0.27 0.15 9 2.07 67.18 13 5.65 Yes 74 -6.12 No 21 0.87 Yes -18 0.35 No 52 38 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr16 31765775 + NM_001130913 ZNF720 1 17.35 10.96 72 6.83 89.52 25 4.89 No 9 0.25 No 21 0.87 Yes -21 0.74 Yes 49 61.72 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 31766845 + NM_001130913 ZNF720 1 0.46 0.29 20 7.18 84.13 27 5.79 Yes 7 1.26 Yes 0 0 No -26 0.91 Yes 44 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 23410355 - NR_045525 ZNF724 1 0.49 0.11 8 4.3 84.41 34 7.14 Yes 21 1.34 Yes 0 0 No -34 0.61 No 36 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 23423079 - NR_045525 ZNF724 1 4.36 0.44 27 9.23 94.37 28 7.94 Yes 44 0.86 Yes 0 0 No -27 0.95 Yes 43 96.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 23425513 - NR_045525 ZNF724 1 7.59 0.74 37 9.78 94.82 18 5.14 No 5 0.42 No 35 0.36 Yes -23 0.32 No 44 41.14 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 23429449 - NR_045525 ZNF724 1 3.56 0.36 20 1.64 0 29 6.68 Yes 16 1.88 Yes 0 0 No -28 0.5 No 42 86.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 63776384 + NM_001170905 ZNF736 1 0.48 0.26 17 11.64 84.53 31 6.76 Yes 18 1.41 Yes 0 0 No -30 0.84 Yes 40 91.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 63797281 + NM_001170905 ZNF736 1 4.46 2.25 58 3.39 77.08 27 4.9 No 29 0.58 No 0 0 No -26 0.85 Yes 44 88.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 63797285 + NM_001170905 ZNF736 1 1.7 0.82 33 -0.22 0 31 5.26 No 33 0.58 No 0 0 No -30 0.77 Yes 40 81.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 63808491 + NM_001170905 ZNF736 1 0.43 0.14 8 8.49 90.79 27 5.57 Yes 42 1.29 Yes 0 0 No -26 0.86 Yes 44 82.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 63798156 + NM_001170905 ZNF736 1 3.48 0.99 37 3.01 0 61 8.19 Yes 48 1.84 Yes 0 0 No -60 0.78 Yes 10 64.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 63798928 + NM_001170905 ZNF736 1 2.04 0.56 28 10.62 87.7 24 6.08 Yes 11 2.09 Yes 0 0 No -23 0.97 Yes 47 96.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 63799888 + NM_001170905 ZNF736 1 0.65 0.19 12 4.26 75.41 30 6.69 Yes 17 1.31 Yes 0 0 No -29 0.91 Yes 41 91.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 63808491 + NM_001170905 ZNF736 1 43.03 13.06 72 8.49 90.79 27 5.57 Yes 42 1.29 Yes 0 0 No -26 0.86 Yes 44 82.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 20730945 - NM_001159293 ZNF737 1 1.63 0.65 29 11.38 87.11 54 7.75 Yes 54 -1.06 No 0 0 No -39 0.69 Yes 31 85.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 20735356 - NM_001159293 ZNF737 1 0.99 0.39 20 0.38 0 31 4.27 No 34 0.7 No 0 0 No -30 0.52 No 40 50.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 20735360 - NM_001159293 ZNF737 1 0.34 0.13 7 1.92 78 27 3.97 No 30 0.7 No 0 0 No -26 0.65 No 44 62.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 20737183 - NM_001159293 ZNF737 1 12.25 1.97 55 9.95 96.52 24 5.18 No 2 0.46 No 0 0 No -23 0.37 No 48 35.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 21543300 + NR_027130 ZNF738 1 0.64 0.14 9 6.95 89.36 27 5.2 No 65 1.16 Yes 0 0 No -26 0.73 Yes 44 56.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 21554765 + NR_027130 ZNF738 1 2.99 1.39 49 12.05 87.72 28 7.62 Yes 15 1.29 Yes 27 0.77 Yes -27 0.65 No 42 71.93 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 21565667 + NR_027130 ZNF738 1 2.19 0.18 11 8.11 91.75 25 5.77 Yes 12 1.16 Yes 0 0 No -24 0.74 Yes 46 81.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 21558687 + NR_027130 ZNF738 1 1.45 0.81 36 0.19 71.73 27 3.96 No 30 0.7 No 0 0 No -26 0.41 No 44 53.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 21558691 + NR_027130 ZNF738 1 1.18 0.58 27 1.13 0 31 4.26 No 34 0.7 No 0 0 No -30 0.3 No 40 50.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 21558963 + NR_027130 ZNF738 1 6.05 0.51 25 6.7 84.3 25 5.2 No 59 0.71 No 0 0 No -24 0.53 No 46 79.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 21559015 + NR_027130 ZNF738 1 5.77 0.51 30 5.56 79.62 14 5.21 No 1 0.84 Yes 0 0 No -36 0.56 No 34 63.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 21560814 + NR_027130 ZNF738 1 5.09 0.4 21 10.91 89.22 139 9.42 Yes 33 0.64 No 24 0.91 Yes -24 0.91 Yes 46 80.54 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 21561430 + NR_027130 ZNF738 1 125.77 9.58 71 4.74 84.41 30 7.1 Yes 17 0.83 Yes 24 0.71 Yes -24 0.46 No 46 69.03 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 21561455 + NR_027130 ZNF738 1 1.65 0.13 8 9.64 92.17 16 4.96 No 42 0.81 Yes 0 0 No -52 0.29 No 21 68.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 21562405 + NR_027130 ZNF738 1 19.93 1.6 52 6.5 85.56 20 5.33 No 52 1.02 Yes 0 0 No -29 0.47 No 41 86.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 21565667 + NR_027130 ZNF738 1 186.53 15.22 72 8.11 91.75 25 5.77 Yes 12 1.16 Yes 0 0 No -24 0.74 Yes 46 81.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr12 53575538 + NM_001004304 ZNF740 1 1.48 0.61 29 7.46 92.85 15 4.92 No 68 -4.04 No 0 0 No -27 0.36 No 51 68.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 53576113 + NM_001004304 ZNF740 1 0.3 0.15 9 12.56 97.5 28 5.38 No 15 1.17 Yes 0 0 No -33 0.51 No 37 71.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr12 53578642 + NM_001004304 ZNF740 1 0.64 0.35 19 10.69 86.09 15 5.74 Yes 38 -0.97 No 24 0.91 Yes -26 0.77 Yes 44 82.43 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr12 53579655 + NM_001004304 ZNF740 1 0.49 0.26 14 8.53 85.56 24 5.1 No 55 -1.88 No 0 0 No -21 0.49 No 44 58.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr12 53582320 + NM_001004304 ZNF740 1 0.57 0.38 23 9.86 83.98 33 6.07 Yes 54 -2.15 No 32 0.73 Yes -32 0.85 Yes 38 90.04 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 149172572 - NM_001163474 ZNF746 1 101.97 21.74 72 11.39 88.6 30 6 Yes 36 0.2 No 26 0.79 Yes -26 0.77 Yes 44 91.65 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 149184348 - NM_001163474 ZNF746 1 1.86 0.69 36 5.48 76.39 32 8.58 Yes 68 -2.47 No 0 0 No -31 0.67 Yes 39 59.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 149189045 - NM_001163474 ZNF746 1 1.83 0.74 34 3.38 79.71 25 3.51 No 2 0.35 No 24 0.79 Yes -24 0.86 Yes 46 80.65 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr7 149190841 - NM_001163474 ZNF746 1 0.18 0.11 7 8.85 89.7 36 6.48 Yes 71 0.38 No 0 0 No -27 0.68 Yes 43 61.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 149191207 - NM_001163474 ZNF746 1 79.19 23.43 72 8.54 86.44 17 5.29 No 4 0.03 No 0 0 No -26 0.75 Yes 44 77.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30544473 - NM_001305019 ZNF747 1 39.5 8.4 72 9.66 88.77 25 6.08 Yes 12 1.47 Yes 0 0 No -24 0.72 Yes 46 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3363048 + NR_126069 ZNF75A 1 538.72 27.22 72 5.94 83.1 21 4.95 No 13 0.92 Yes 25 0.93 Yes -25 0.83 Yes 45 73.77 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 3363090 + NR_126069 ZNF75A 1 3.82 0.17 11 7.63 95.21 27 5.38 No 55 0.9 Yes 0 0 No -26 0.5 No 39 40.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 3366550 + NR_126069 ZNF75A 1 3.25 0.11 8 5.3 87.61 48 4.93 No 57 0.84 Yes 0 0 No -32 0.92 Yes 38 96.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3367246 + NR_126069 ZNF75A 1 0.65 0.25 17 9.25 80.44 28 5.55 No 21 0.4 No 0 0 No -27 0.91 Yes 43 79.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 35254101 + NM_003427 ZNF76 1 0.65 0.29 17 -0.48 68.84 16 5.48 No 61 0.58 No 0 0 No -19 0.47 No 47 29.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 35255399 + NM_003427 ZNF76 1 0.33 0.22 13 6.63 80.83 32 6.16 Yes 37 0.07 No 18 0.94 Yes -31 0.78 Yes 39 86.84 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 35255425 + NM_003427 ZNF76 1 1.46 0.93 41 -0.51 73.57 22 5.92 Yes 9 1.87 Yes 0 0 No -21 0.92 Yes 49 84.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35258029 + NM_003427 ZNF76 1 0.9 0.57 28 -7.94 0 18 4.36 No 72 1.33 Yes 30 0.67 Yes -30 0.49 No 62 25.29 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 35258623 + NM_003427 ZNF76 1 0.57 0.33 20 4.08 87.24 20 4.9 No -4 1.02 Yes 0 0 No -19 0.44 No 45 62.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr6 35259914 + NM_003427 ZNF76 1 0.35 0.13 8 7.45 78.92 28 8.57 Yes 34 1.73 Yes 0 0 No -27 0.79 Yes 43 76.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 35260316 + NM_003427 ZNF76 1 3.5 1.32 56 7.28 77.32 21 4.7 No 43 2.25 Yes 26 0.7 Yes -26 0.73 Yes 45 77.14 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 35262508 + NM_003427 ZNF76 1 0.99 0.38 19 7.01 85.32 45 6.63 Yes 52 0.12 No 0 0 No -19 0.44 No 51 74.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 35262556 + NM_003427 ZNF76 1 4.44 1.63 53 6.92 91.67 21 5.1 No 8 0.65 No 0 0 No -20 0.82 Yes 50 65.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 53950285 + NM_001289953 ZNF761 1 0.67 0.15 10 8.88 75.08 25 5.43 No 50 -1.76 No 0 0 No -23 0.82 Yes 47 86.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 30567432 - NM_001172679 ZNF764 1 26.66 3.63 67 8.38 89.1 25 5.98 Yes 12 1.52 Yes 24 0.86 Yes -24 0.78 Yes 46 82.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 53903112 + NM_001040185 ZNF765 1 2.31 0.18 12 7.24 96.05 22 5.24 No 9 1.06 Yes 0 0 No -21 0.71 Yes 49 73.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53906003 + NM_001040185 ZNF765 1 4.76 0.44 19 7.69 95.02 19 5 No 73 0.55 No 0 0 No -27 0.61 No 52 69.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 53907726 + NM_001040185 ZNF765 1 4.48 0.51 29 9.02 84.5 26 6.54 Yes 13 0.51 No 0 0 No -25 0.88 Yes 45 87.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 52791294 + NM_001010851 ZNF766 1 1.99 0.99 44 5.15 84.41 30 6.53 Yes 51 2.56 Yes 29 0.82 Yes -29 0.93 Yes 41 92.25 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 149248841 - NR_027788 ZNF767P 1 7.81 1.24 50 6.98 80.84 26 5 No 43 1.21 Yes 0 0 No -25 0.73 Yes 45 63.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 149250105 - NR_027788 ZNF767P 1 15.1 2.06 57 6.44 83.87 28 6.86 Yes 15 1.22 Yes 24 0.82 Yes -27 0.82 Yes 43 86.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 149250105 - NR_027788 ZNF767P 1 0.87 0.15 8 6.44 83.87 28 6.86 Yes 15 1.22 Yes 24 0.82 Yes -27 0.82 Yes 43 86.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 149254284 - NR_027788 ZNF767P 1 0.6 0.1 7 11.05 87.69 15 7.87 Yes 2 1.13 Yes 0 0 No -35 0.62 No 48 55.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 149255047 - NR_027788 ZNF767P 1 2.1 0.28 13 7.95 84.21 16 5.82 Yes 3 0.7 No 0 0 No -34 0.41 No 44 53.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 149258109 - NR_027788 ZNF767P 1 0.55 0.14 9 9.78 86.76 21 6.74 Yes 8 1.59 Yes 0 0 No -20 0.74 Yes 50 78.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 149260695 - NR_027788 ZNF767P 1 10.01 1.75 60 7.01 79.52 30 6.4 Yes 17 0.27 No 29 0.7 Yes -29 0.81 Yes 41 67.3 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 149280290 - NR_027788 ZNF767P 1 0.95 0.18 13 5.99 83.85 46 7.14 Yes 33 0.56 No 0 0 No -45 0.92 Yes 25 92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 149297453 - NR_027788 ZNF767P 1 1.35 0.22 13 11.33 99.37 22 7 Yes 9 0.7 No 0 0 No -25 0.72 Yes 45 55.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 149306698 - NR_027788 ZNF767P 1 1.92 0.32 13 10.35 80.65 21 5.67 Yes 1 2.28 Yes 0 0 No -20 0.81 Yes 50 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 149309378 - NR_027788 ZNF767P 1 0.89 0.11 7 5.1 89.28 17 3.78 No -2 0.7 No 0 0 No -24 0.37 No 53 73.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 30537406 - NM_024671 ZNF768 1 1.14 0.38 23 5.59 79.21 22 6.63 Yes -3 0.57 No 28 0.95 Yes -21 0.88 Yes 49 89.01 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 35272050 - NM_014106 ZNF770 1 0.09 0.11 8 6.34 79.76 47 6.2 Yes 17 0.46 No 0 0 No -29 0.82 Yes 41 73.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 35276692 - NM_014106 ZNF770 1 0.11 0.11 7 3.8 75.05 20 7.14 Yes 7 1.04 Yes 0 0 No -19 0.65 No 51 83.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 35276848 - NM_014106 ZNF770 1 0.54 0.61 27 3.97 84.41 30 5.48 No 76 0.85 Yes 0 0 No -29 0.48 No 41 41.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 35277328 - NM_014106 ZNF770 1 0.49 0.56 25 3.06 0 31 6.91 Yes 18 1.82 Yes 0 0 No -30 0.79 Yes 40 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 35278071 - NM_014106 ZNF770 1 0.14 0.15 10 7.23 89.36 23 5.2 No 72 1.89 Yes 0 0 No -22 0.62 No 22 68.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 35279654 - NM_014106 ZNF770 1 0.22 0.25 16 8.86 92.03 28 5.57 Yes 15 1.11 Yes 0 0 No -27 0.85 Yes 43 82.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 150082390 + NM_173680 ZNF775 1 0.84 0.13 7 3.41 80.98 26 6.24 Yes 63 -3.59 No 0 0 No -25 0.83 Yes 45 60.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 150084559 + NM_173680 ZNF775 1 6.38 0.83 36 10.63 88.48 22 5.83 Yes 9 1.54 Yes 0 0 No -21 0.87 Yes 49 88.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 150092966 + NM_173680 ZNF775 1 2.65 0.47 25 6.46 82.8 43 7 Yes 30 1.2 Yes 0 0 No -27 0.54 No 43 62.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 58260521 + NM_173632 ZNF776 1 0.44 0.11 7 6.5 85.02 21 7.21 Yes 8 1.53 Yes 23 0.77 Yes -20 0.82 Yes 50 90.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 58264641 + NM_173632 ZNF776 1 0.41 0.18 12 3.3 81.88 17 5.2 No 23 1.06 Yes 21 0.4 Yes -29 0.55 No 49 39.23 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 58264717 + NM_173632 ZNF776 1 0.38 0.17 11 4.71 88.18 24 5.2 No 11 0.72 No 0 0 No -23 0.9 Yes 47 88.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 58268239 + NM_173632 ZNF776 1 3.57 1.53 51 10.04 91.79 25 4.63 No 12 0.82 Yes 27 0.47 Yes -27 0.46 No 43 62.79 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 149130027 - NM_015694 ZNF777 1 1.78 0.74 35 0.81 75.29 27 6.16 Yes 14 1.65 Yes 29 0.91 Yes -26 0.95 Yes 44 96.06 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89284649 + NM_001201407 ZNF778 1 12.02 0.67 31 8.35 77.94 30 7.14 Yes 17 2.02 Yes 29 0.97 Yes -29 0.85 Yes 41 94.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr16 89287411 + NM_001201407 ZNF778 1 11.28 0.64 34 -5.14 0 16 4 No 19 1.13 Yes 24 0.76 Yes -31 0.75 Yes 39 83.44 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 40587783 - NM_001142578 ZNF780A 1 0.34 0.15 8 1.77 67.83 25 5.17 No 62 -1.57 No 0 0 No -24 0.8 Yes 46 82.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 40587825 - NM_001142578 ZNF780A 1 42.54 18.4 72 6.65 80.32 32 8.06 Yes 74 0.55 No 31 0.36 Yes -31 0.73 Yes 39 75.08 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr19 40589564 - NM_001142578 ZNF780A 1 1.27 0.4 21 3.46 0 46 8.05 Yes 33 0.76 No 0 0 No -45 0.74 Yes 25 81.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 40595210 - NM_001142578 ZNF780A 1 1.63 0.28 14 8.06 81.35 33 5.83 Yes 73 -3.37 No 0 0 No -29 0.4 No 41 39.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 40595322 - NM_001142578 ZNF780A 1 3.11 0.44 16 9.33 88.35 32 4.91 No 40 1.23 Yes 25 0.73 Yes -31 0.5 No 45 57.22 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 40553381 - NM_001005851 ZNF780B 1 17.67 6.19 71 6.35 82.09 32 7.99 Yes 71 0.57 No 31 0.38 Yes -31 0.67 Yes 39 68.58 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 40553381 - NM_001005851 ZNF780B 1 1.84 0.47 9 6.35 82.09 32 7.99 Yes 71 0.57 No 31 0.38 Yes -31 0.67 Yes 39 68.58 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 40554662 - NM_001005851 ZNF780B 1 1.96 0.42 9 5.51 91.45 12 5.45 No 52 0.83 Yes 0 0 No -27 0.71 Yes 43 73.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40554784 - NM_001005851 ZNF780B 1 1.65 0.33 8 7.22 86.46 28 6.56 Yes 70 -3.1 No 0 0 No -27 0.73 Yes 43 71.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 40554964 - NM_001005851 ZNF780B 1 2.1 0.56 25 11.86 100 38 6.42 Yes 66 -1.4 No 0 0 No -35 0.5 No 35 62.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 40561392 - NM_001005851 ZNF780B 1 2.22 0.4 21 8.24 85.86 24 6 Yes 11 1.2 Yes 0 0 No -23 0.97 Yes 47 96.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 40561484 - NM_001005851 ZNF780B 1 7.39 1.07 45 4.24 69.67 46 6.34 Yes 33 1.02 Yes 24 0.66 Yes -45 0.55 No 25 75.88 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 99582058 - NM_001346993 ZNF782 1 0.78 0.11 8 -0.07 73.65 31 4.64 No 7 0.39 No 0 0 No -33 0.45 No 37 72.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 148769472 - NM_152411 ZNF786 1 4.75 1.63 56 8.61 97.37 38 6.16 Yes 25 0.54 No 0 0 No -31 0.54 No 39 60.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148773992 - NM_152411 ZNF786 1 1.56 0.35 19 5.24 73.55 39 5.06 No 4 0.59 No 0 0 No -23 0.54 No 37 46.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 148774360 - NM_152411 ZNF786 1 1.05 0.22 15 4.69 63.12 61 7.45 Yes 48 0.45 No 0 0 No -48 0.69 Yes 22 83.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 148777224 - NM_152411 ZNF786 1 0.52 0.13 8 2.86 84 15 4.61 No 2 1.5 Yes 0 0 No -26 0.46 No 48 56.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 56612960 - NM_001002836 ZNF787 1 0.2 0.11 7 8.5 90.28 20 5.05 No 7 0.83 Yes 0 0 No -24 0.69 Yes 46 70.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12221448 + NM_001348163 ZNF788 1 5.89 0.6 28 9.79 77.71 34 6 Yes 21 1.21 Yes 0 0 No -33 0.91 Yes 37 96.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 12221421 + NM_001348163 ZNF788 1 4.34 0.44 25 5.22 84.83 29 6.62 Yes 16 0.52 No 0 0 No -25 0.77 Yes 45 65.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 99078575 + NM_213603 ZNF789 1 3.55 0.19 14 6.37 75.88 23 7.83 Yes 52 1.23 Yes 0 0 No -25 0.72 Yes 45 61.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 99079785 + NM_213603 ZNF789 1 65.06 2.54 62 6.39 85.07 28 5.41 No 62 0.66 No 22 0.85 Yes -22 0.58 No 48 62.12 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr7 99082830 + NM_213603 ZNF789 1 4.54 0.42 24 8.07 76.31 40 11.62 Yes 27 1.78 Yes 29 0.73 Yes -39 0.52 No 31 89.95 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 130195552 + NM_001322260 ZNF79 1 1.5 0.71 34 3.56 74.41 30 6.57 Yes -2 0.06 No 0 0 No -29 0.79 Yes 41 72.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 130196952 + NM_001322260 ZNF79 1 0.24 0.17 8 2.7 0 34 6.38 Yes 14 0.8 Yes 0 0 No -30 0.58 No 40 57.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 37313034 - NM_001242800 ZNF790 1 2.04 0.46 25 9.62 91.71 30 6.87 Yes 67 0.58 No 0 0 No -29 0.84 Yes 41 66.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 12723039 + NM_153358 ZNF791 1 15.83 4.89 69 11.86 94.37 34 8.87 Yes 21 1.86 Yes 33 0.91 Yes -33 0.49 No 37 84.53 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr19 12738537 + NM_153358 ZNF791 1 0.54 0.22 11 -0.69 75.11 27 5.33 No 2 1.1 Yes 0 0 No -26 0.7 Yes 44 71.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 58823386 + NR_144447 ZNF8-ERVK3-1 1 0.78 1 41 -5.25 51.69 53 7.11 Yes 18 0.11 No 21 0.81 Yes -50 0.46 No 20 70.89 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 127013534 - NM_176814 ZNF800 1 0.4 0.67 29 10.07 92.4 24 4.07 No 76 0.29 No 0 0 No -23 0.82 Yes 47 94.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 127013534 - NM_176814 ZNF800 1 0.36 0.61 30 10.07 92.4 24 4.07 No 76 0.29 No 0 0 No -23 0.82 Yes 47 94.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 127014683 - NM_176814 ZNF800 1 0.07 0.11 7 8.79 85.67 18 4.81 No 31 1.28 Yes 0 0 No -25 0.84 Yes 45 89.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 127016843 - NM_176814 ZNF800 1 0.08 0.13 8 4.98 70.21 14 5.14 No 1 0.78 Yes 0 0 No -28 0.51 No 42 54.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 127017408 - NM_176814 ZNF800 1 0.13 0.15 9 2.64 77.38 21 4.34 No 60 1.29 Yes 26 0.7 Yes -26 0.55 No 50 66.63 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 127025626 - NM_176814 ZNF800 1 0.46 0.53 31 4.61 72.87 21 3.43 No 62 0.93 Yes 0 0 No -54 0.27 No 41 60.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 127025653 - NM_176814 ZNF800 1 0.38 0.49 23 -5.41 72 51 7.49 Yes -3 1.38 Yes 0 0 No -27 0.7 Yes 32 57.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 127025707 - NM_176814 ZNF800 1 0.38 0.5 21 8.38 82.95 19 5 No 6 0.51 No 0 0 No -18 0.72 Yes 42 56.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 53046106 + NM_001321424 ZNF808 1 0.63 0.14 10 3.88 90.11 22 4.99 No 2 0.74 No 0 0 No -26 0.47 No 44 46.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 53055691 + NM_001321424 ZNF808 1 1.62 0.42 23 3.05 0 37 7.75 Yes 24 2.32 Yes 0 0 No -36 0.61 No 34 92.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 47720118 + NM_007137 ZNF81 1 6.06 1.04 46 5.66 71.12 32 6.21 Yes 54 -3.74 No 25 0.83 Yes -24 0.66 No 45 66 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chrX 47720770 + NM_007137 ZNF81 1 1.26 0.19 14 12.37 95.6 12 5.48 No 42 -0.78 No 0 0 No -23 0.61 No 47 70.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 53972612 + NM_001004301 ZNF813 1 3.27 0.25 16 6.65 84.31 63 7.59 Yes 42 1.48 Yes 0 0 No -25 0.64 No 45 58.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 53979445 + NM_001004301 ZNF813 1 1.37 0.13 9 8.11 89.54 16 6.49 Yes 3 1.3 Yes 0 0 No -25 0.82 Yes 45 73.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53981451 + NM_001004301 ZNF813 1 3.13 0.28 19 5.09 80.8 62 8.72 Yes 49 0.96 Yes 0 0 No -25 0.44 No 45 35.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 58389997 - NM_001144989 ZNF814 1 0.99 0.17 12 2.43 64.92 27 7 Yes 14 0.46 No 0 0 No -26 0.54 No 44 49.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 58397338 - NM_001144989 ZNF814 1 4.92 0.69 33 2.81 87.56 34 6.13 Yes 30 0.23 No 0 0 No -33 0.69 Yes 37 69.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 53463431 - NM_001202457 ZNF816 1 8.69 1.11 49 7.47 83.46 30 6.78 Yes 17 1.19 Yes 0 0 No -29 0.61 No 41 82.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 11834155 - NM_017507 ZNF823 1 1.42 0.24 13 -2.4 68.76 26 6 Yes 13 0.75 No 0 0 No -25 0.63 No 45 61.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 146733590 - NM_178835 ZNF827 1 0.45 0.19 12 8.4 84.71 22 5.83 Yes 76 -2.25 No 0 0 No -27 0.85 Yes 43 77.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 146734459 - NM_178835 ZNF827 1 0.54 0.22 15 8.77 76.11 34 5.35 No 10 0.05 No 0 0 No -22 0.5 No 33 56.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 146736225 - NM_178835 ZNF827 1 1.72 0.6 27 9.36 81.99 34 6.31 Yes 21 0.68 No 0 0 No -33 0.66 Yes 37 69.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 146785569 - NM_178835 ZNF827 1 0.47 0.31 19 10.07 88.27 30 6.38 Yes 22 1.68 Yes 0 0 No -29 0.68 Yes 41 89.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 146808000 - NM_178835 ZNF827 1 0.34 0.26 16 9.82 93.38 25 5.17 No 50 -2.8 No 0 0 No -24 0.58 No 46 66.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 146808058 - NM_178835 ZNF827 1 0.11 0.1 7 9.8 89.89 12 5.29 No 49 1.22 Yes 0 0 No -21 0.3 No 49 27.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 146813562 - NM_178835 ZNF827 1 3.53 1.18 48 -1 0 9 3.58 No 22 1.22 Yes 0 0 No -35 0.77 Yes 36 72.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53120069 - NM_001277948 ZNF83 1 5.25 0.67 34 6.49 90.92 29 5.39 No 37 1.13 Yes 22 0.69 Yes -49 0.87 Yes 21 97.04 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 53120095 - NM_001277948 ZNF83 1 13.29 1.54 57 4.18 81.65 29 5.41 No 11 1.16 Yes 23 0.92 Yes -23 0.93 Yes 47 96.23 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 53122019 - NM_001277948 ZNF83 1 2.18 0.26 15 11.78 78.73 18 5.22 No 5 0.98 Yes 29 0.68 Yes -29 0.53 No 41 58.1 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 53164556 - NM_001277948 ZNF83 1 3.91 0.42 19 5.54 81.55 27 6.27 Yes 72 0.71 No 0 0 No -26 0.93 Yes 44 81.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 53169791 - NM_001277948 ZNF83 1 3.52 0.39 23 8.32 81.36 29 5.63 Yes 16 1.14 Yes 0 0 No -28 0.88 Yes 42 83.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 53177507 - NM_001277948 ZNF83 1 23.52 2.6 60 9.34 90.66 25 5.61 Yes 67 1 Yes 29 0.57 Yes -29 0.45 No 41 53.02 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 53189125 - NM_001277948 ZNF83 1 1.6 0.19 10 8.05 92.17 24 4.92 No 11 0.83 Yes 0 0 No -56 0.63 No 14 64.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 52666102 - NM_001102657 ZNF836 1 2.72 0.26 17 5.18 76.23 33 5.57 Yes 71 -1.4 No 0 0 No -29 0.49 No 41 41.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 52668639 - NM_001102657 ZNF836 1 7.26 0.67 33 3.38 77.79 31 5.92 Yes 18 1.45 Yes 30 0.85 Yes -30 0.9 Yes 40 95.1 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 52673039 - NM_001102657 ZNF836 1 4.8 0.51 26 2.36 83.57 42 6.48 Yes 41 1.16 Yes 0 0 No -36 0.9 Yes 34 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 102797967 + NM_018335 ZNF839 1 0.53 0.1 7 -5.41 0 12 4.24 No 65 0.81 Yes 26 0.65 Yes -51 0.37 No 19 85.58 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 102802971 + NM_018335 ZNF839 1 1.32 0.43 23 4.45 79.57 14 4.4 No 1 0.6 No 22 0.93 Yes -22 0.93 Yes 48 87.76 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 102808439 + NM_018335 ZNF839 1 13.24 2.32 61 10.81 92.99 17 6.2 Yes 4 0.41 No 24 0.71 Yes -33 0.34 No 37 51.78 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 52592732 - NM_001321349 ZNF841 1 0.53 0.18 11 8.82 83.82 35 7.14 Yes 62 1.74 Yes 0 0 No -34 0.83 Yes 36 79.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 52597151 - NM_001321349 ZNF841 1 10.21 1.25 48 1.24 86.14 21 4.8 No 33 1.21 Yes 0 0 No -20 0.86 Yes 50 71.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 52597165 - NM_001321349 ZNF841 1 34.49 4.04 70 1.2 71.28 32 5.74 Yes 19 1.2 Yes 18 0.88 Yes -31 0.82 Yes 39 93.33 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 52597168 - NM_001321349 ZNF841 1 12.48 1.38 52 1.52 74.11 29 5.48 No 16 1.19 Yes 18 0.88 Yes -28 0.9 Yes 42 95.23 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 52597189 - NM_001321349 ZNF841 1 13.13 1.43 56 5.53 79.06 18 5.74 Yes 5 -0.7 No 18 0.88 Yes -20 0.6 No 50 62.08 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr19 52598751 - NM_001321349 ZNF841 1 0.93 0.11 8 12.77 85.56 35 6.4 Yes 22 1.26 Yes 0 0 No -34 0.87 Yes 36 85.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 9874043 - NM_001077624 ZNF846 1 9.98 0.4 22 3.79 81.32 34 5.63 Yes 61 -4.59 No 0 0 No -33 0.79 Yes 37 90.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 44542130 - NM_001287349 ZNF852 1 221.65 12.65 72 6.59 92.01 29 5.41 No 16 0.5 No 28 0.65 Yes -28 0.49 No 42 42.46 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr3 44542130 - NM_001287349 ZNF852 1 5.16 0.33 19 6.59 92.01 29 5.41 No 16 0.5 No 28 0.65 Yes -28 0.49 No 42 42.46 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 52877756 + NM_001145434 ZNF880 1 4.02 0.97 43 4.93 84.17 26 5.35 No 29 0.76 No 0 0 No -25 0.73 Yes 45 58.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 52879787 + NM_001145434 ZNF880 1 0.33 0.11 7 3.42 0 46 7.21 Yes 41 0.72 No 0 0 No -45 0.71 Yes 25 90.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 52886917 + NM_001145434 ZNF880 1 0.29 0.13 8 7.48 88.91 45 8.37 Yes 14 1.14 Yes 0 0 No -26 0.92 Yes 44 86.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 23571047 - NM_001300951 ZNF91 1 0.54 0.22 14 8.28 87.07 48 9.8 Yes 35 0.92 Yes 0 0 No -24 0.54 No 36 42.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 64850273 + NM_001287533 ZNF92 1 0.31 0.17 9 11.95 86.71 20 5.37 No 76 -3.84 No 0 0 No -29 0.67 Yes 41 75.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 64853045 + NM_001287533 ZNF92 1 0.69 0.4 21 -0.22 0 13 3.87 No 55 1.06 Yes 0 0 No -28 0.47 No 42 45.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 20018532 + NM_031218 ZNF93 1 1.54 0.25 14 3.86 87.49 21 5.2 No 8 1.16 Yes 20 0.72 Yes -20 0.8 Yes 50 90.3 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 20019733 + NM_031218 ZNF93 1 0.87 0.17 7 9.34 81.52 23 5.84 Yes 10 1.26 Yes 22 0.88 Yes -22 0.89 Yes 48 87.79 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr19 20025542 + NM_031218 ZNF93 1 2.28 0.28 13 9.22 96.52 24 5.33 No 66 0.4 No 23 0.41 Yes -23 0.61 No 48 53.64 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr19 20037919 + NM_031218 ZNF93 1 2.57 0.42 22 5.28 0 16 4.17 No 3 0.3 No 19 0.74 Yes -19 0.92 Yes 51 51.08 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr19 20042816 + NM_031218 ZNF93 1 6.04 0.92 42 9.32 86.56 34 7.1 Yes 21 0.15 No 29 0.41 Yes -33 0.7 Yes 37 56.98 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 47866221 - NM_021035 ZNFX1 1 0.31 0.5 24 8.5 86.05 16 5.59 Yes 41 0.82 Yes 0 0 No -30 0.47 No 17 50.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr20 47870329 - NM_021035 ZNFX1 1 0.07 0.11 7 4.8 68.35 28 5.35 No 45 0.64 No 0 0 No -27 0.72 Yes 18 87.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr20 47871279 - NM_021035 ZNFX1 1 0.12 0.18 11 -4.59 0 11 3.73 No 29 1.27 Yes 0 0 No -41 0.74 Yes 29 76.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47872516 - NM_021035 ZNFX1 1 0.11 0.13 8 3.58 81.89 24 4.41 No 29 1.66 Yes 24 0.84 Yes -24 0.65 No 46 66.43 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr20 47872531 - NM_021035 ZNFX1 1 1.25 1.32 52 -2.08 55.6 55 7.48 Yes 14 1.66 Yes 24 0.84 Yes -26 0.47 No 34 77.77 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr20 47880009 - NM_021035 ZNFX1 1 0.28 0.4 22 -2.25 0 10 4.58 No 28 1.17 Yes 0 0 No -40 0.9 Yes 30 94.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47880102 - NM_021035 ZNFX1 1 0.36 0.43 24 7.89 78.48 46 6.96 Yes 33 1.89 Yes 0 0 No -33 0.68 Yes 37 74.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr20 47892417 - NM_021035 ZNFX1 1 10.84 8.18 72 0.61 0 12 4.12 No 61 0.16 No 18 0.56 Yes -26 0.49 No 44 54.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr20 47892465 - NM_021035 ZNFX1 1 0.67 0.43 25 6.23 81.06 26 6.63 Yes 13 0.17 No 18 0.56 Yes -25 0.91 Yes 45 81.67 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr20 47893132 - NM_021035 ZNFX1 1 0.24 0.18 12 12.75 95.59 26 5.28 No 76 1.05 Yes 0 0 No -26 0.78 Yes 44 64.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 100861599 + NM_006349 ZNHIT1 1 2 4.71 72 5.85 82.05 42 5.2 No 29 1.31 Yes 41 0.64 Yes -41 0.84 Yes 29 86.85 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 100864077 + NM_006349 ZNHIT1 1 0.04 0.13 7 4.94 90.11 27 5.39 No 74 -3.01 No 0 0 No -26 0.85 Yes 44 74.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 100864897 + NM_006349 ZNHIT1 1 0.2 0.44 25 2.89 69.91 24 5.83 Yes 23 0.09 No 0 0 No -23 0.83 Yes 47 67.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 100864913 + NM_006349 ZNHIT1 1 0.39 0.96 44 -11.54 76.1 22 4.76 No 12 0.15 No 0 0 No -21 0.91 Yes 46 73.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 100866762 + NM_006349 ZNHIT1 1 0.04 0.11 7 -5.67 0 21 5.67 Yes 1 0.5 No 0 0 No -28 0.52 No 57 36.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 34845496 + NM_001281432 ZNHIT3 1 0.09 0.18 12 2.88 0 38 7.74 Yes 25 1.24 Yes 0 0 No -37 0.88 Yes 33 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 34848661 + NM_001281432 ZNHIT3 1 0.39 0.82 38 3.26 0 36 6.86 Yes 23 0.3 No 30 0.72 Yes -35 0.83 Yes 35 82.78 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 34849803 + NM_001281432 ZNHIT3 1 0.66 1.13 45 4.7 76.51 26 4.93 No 41 1.67 Yes 25 0.71 Yes -25 0.46 No 45 48.54 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 86127958 - NM_017953 ZNHIT6 1 0.14 0.11 7 6 92.36 28 4.36 No 73 -2.58 No 0 0 No -21 0.61 No 49 73.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 86127961 - NM_017953 ZNHIT6 1 2.4 1.76 52 5.75 78.33 25 4.12 No 70 -2.58 No 0 0 No -24 0.75 Yes 46 56.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 86145132 - NM_017953 ZNHIT6 1 0.87 1 44 7.73 80.47 19 6.69 Yes 54 0.03 No 0 0 No -23 0.59 No 47 63.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 86146587 - NM_017953 ZNHIT6 1 0.16 0.17 11 -9.83 0 24 4.93 No 11 1.05 Yes 0 0 No -23 0.96 Yes NA NA NA BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 75118326 + NM_032268 ZNRF1 1 1.28 0.42 18 6.55 79.82 19 4.52 No -3 0.46 No 32 0.73 Yes -32 0.74 Yes 38 77.22 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 75129495 + NM_032268 ZNRF1 1 0.56 0.24 15 6.6 82.71 13 5.02 No 53 0.5 No 20 0.3 Yes -20 0.74 Yes 50 86.63 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr16 75140271 + NM_032268 ZNRF1 1 0.4 0.14 9 7.49 80.03 27 7.21 Yes 57 1.43 Yes 0 0 No -26 0.75 Yes 44 76.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 75141529 + NM_032268 ZNRF1 1 0.23 0.11 7 4.66 66.53 41 7.86 Yes 66 -2.88 No 0 0 No -41 0.83 Yes 29 89.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 75141636 + NM_032268 ZNRF1 1 0.32 0.13 7 -5.29 0 13 3.87 No 10 -2.55 No 0 0 No -26 0.64 No 44 50.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 75141735 + NM_032268 ZNRF1 1 0.62 0.32 16 8.64 77.06 9 5.92 Yes -4 1.17 Yes 23 0.56 Yes -31 0.67 Yes 39 56.77 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 75143299 + NM_032268 ZNRF1 1 0.66 0.28 14 8.51 86.83 12 6.48 Yes -1 1.36 Yes 0 0 No -28 0.76 Yes 42 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 30363784 + NM_147128 ZNRF2 1 0.65 0.65 32 8.53 86.44 34 4.54 No 8 1.39 Yes 0 0 No -20 0.94 Yes 50 94.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 30405669 + NM_147128 ZNRF2 1 0.61 0.64 29 3.2 72.51 26 5.29 No 31 0.32 No 0 0 No -25 0.85 Yes 45 91.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 116652964 - NM_003904 ZPR1 1 0.13 0.31 17 -4.78 0 26 5.28 No 63 0.95 Yes 28 0.94 Yes -25 0.95 Yes NA NA NA BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 116656379 - NM_003904 ZPR1 1 0.4 0.79 36 9.85 92.15 32 5.62 Yes 19 0.4 No 24 0.83 Yes -27 0.54 No 39 63.9 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 126650855 + NM_017580 ZRANB1 1 25.76 7.67 71 8.73 87.53 16 7.27 Yes 3 1.7 Yes 0 0 No -22 0.83 Yes 48 72.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 126658347 + NM_017580 ZRANB1 1 1.01 0.68 32 1.58 70.68 31 4.76 No 65 -5.66 No 0 0 No -31 0.55 No 40 59.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 126662195 + NM_017580 ZRANB1 1 0.3 0.18 8 -4.68 0 20 4.35 No 69 -5.86 No 21 0.55 Yes -32 0.54 No 51 18.05 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr10 126669793 + NM_017580 ZRANB1 1 0.64 0.4 25 5.29 79.88 41 6.48 Yes 69 -1.94 No 0 0 No -35 0.84 Yes 35 92.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 126673346 + NM_017580 ZRANB1 1 1.88 0.81 44 0.32 0 49 7.66 Yes 36 1.07 Yes 0 0 No -48 0.77 Yes 22 88.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 71537938 - NM_203350 ZRANB2 1 0.03 0.11 7 -12.5 0 31 5.83 Yes 18 0.56 No 0 0 No -30 0.75 Yes NA NA NA BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 71541323 - NM_203350 ZRANB2 1 0.51 1.57 51 12.79 94.74 26 8.29 Yes 41 1.3 Yes 0 0 No -29 0.64 No 45 68.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 71542555 - NM_203350 ZRANB2 1 0.1 0.53 28 1.01 0 10 3.87 No 18 0.9 Yes 0 0 No -30 0.85 Yes 40 93.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 71544279 - NM_203350 ZRANB2 1 0.15 0.72 40 10.06 97.49 35 4.94 No -2 -1.56 No 26 0.86 Yes -34 0.7 Yes 36 73.1 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 71544391 - NM_203350 ZRANB2 1 0.09 0.38 21 -9.19 0 25 5.58 Yes 1 0.69 No 0 0 No -27 0.57 No NA NA NA BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 135996583 - NM_001286569 ZRANB3 1 0.82 0.13 9 6.79 83.14 28 4.31 No 56 -2.95 No 0 0 No -25 0.59 No 48 55.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 136070921 - NM_001286569 ZRANB3 1 6.49 0.5 24 -0.08 81.99 25 7.27 Yes 12 1.58 Yes 0 0 No -24 0.75 Yes 46 83.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136094829 - NM_001286569 ZRANB3 1 3.03 0.51 29 3.13 91.18 21 4.69 No 70 0.62 No 0 0 No -20 0.73 Yes 50 89.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136096971 - NM_001286569 ZRANB3 1 3.13 0.56 30 11.83 95.2 34 8.06 Yes 21 1.88 Yes 0 0 No -33 0.95 Yes 37 93.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136102308 - NM_001286569 ZRANB3 1 1.68 0.26 17 8.16 91.27 38 5.07 No 25 0.78 Yes 0 0 No -31 0.93 Yes 39 95.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 136103032 - NM_001286569 ZRANB3 1 52.89 8.31 72 2.82 0 26 9.41 Yes 42 1.03 Yes 25 0.72 Yes -25 0.7 Yes 41 71.37 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 136103036 - NM_001286569 ZRANB3 1 1.63 0.22 12 1.6 84.41 22 9.2 Yes 9 1.04 Yes 25 0.72 Yes -25 0.67 Yes 45 78.12 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 136105178 - NM_001286569 ZRANB3 1 1.06 0.29 17 6.76 84.17 22 4.9 No 9 0.8 Yes 0 0 No -21 0.47 No 49 48.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 136107733 - NM_001286569 ZRANB3 1 0.26 0.1 7 9.75 85.73 32 5.91 Yes 76 0.61 No 0 0 No -31 0.87 Yes 39 96.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136111107 - NM_001286569 ZRANB3 1 1.81 0.71 34 -0.19 79.3 24 5.29 No 11 0.55 No 0 0 No -23 0.77 Yes 47 85.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 136224755 - NM_001286569 ZRANB3 1 0.37 0.15 9 -0.39 64.18 32 6.42 Yes 19 0.79 Yes 0 0 No -31 0.57 No 39 70.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 136241793 - NM_001286569 ZRANB3 1 0.54 0.14 8 4.55 67.7 40 6.2 Yes 27 1.09 Yes 0 0 No -39 0.54 No 31 74.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 136244406 - NM_001286569 ZRANB3 1 0.61 0.25 14 6.72 86.26 28 5.35 No 15 0.68 No 0 0 No -27 0.74 Yes 43 85.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 15814270 + NM_005089 ZRSR2 1 0.34 0.14 10 0.78 84.22 21 5.09 No 33 1.11 Yes 0 0 No -20 0.41 No 50 42.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chrX 15818005 + NM_005089 ZRSR2 1 4.6 2.26 60 -1.04 0 14 4.47 No 55 0.78 Yes 0 0 No -33 0.78 Yes 37 83.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 15818331 + NM_005089 ZRSR2 1 5.97 1.47 55 10.62 88.27 44 8 Yes 31 1.63 Yes 0 0 No -43 0.53 No 27 71.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chrX 15819373 + NM_005089 ZRSR2 1 2.04 0.46 23 3.08 83.2 63 6.7 Yes 50 1.57 Yes 25 0.89 Yes -30 0.55 No 30 55.41 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 15819396 + NM_005089 ZRSR2 1 1.27 0.33 17 8.22 87.44 26 5.66 Yes 73 1.57 Yes 25 0.89 Yes -25 0.46 No 18 35.5 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chrX 15833832 + NM_005089 ZRSR2 1 0.56 0.32 18 3.75 77.16 28 5.48 No 41 0.24 No 0 0 No -27 0.95 Yes 43 96.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chrX 15833851 + NM_005089 ZRSR2 1 0.23 0.15 10 4.85 76.51 28 5.28 No 60 0.24 No 0 0 No -27 0.29 No 43 46.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chrX 15835374 + NM_005089 ZRSR2 1 0.2 0.14 8 8.34 86.3 23 4.91 No 66 0.24 No 0 0 No -23 0.82 Yes 47 67.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chrX 15840655 + NM_005089 ZRSR2 1 1.15 0.44 22 9.24 92.05 30 5.96 Yes 4 1.18 Yes 0 0 No -30 0.74 Yes 40 81.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chrX 15840967 + NM_005089 ZRSR2 1 7.75 3.18 62 6.05 87.53 25 5.2 No 12 0.77 Yes 0 0 No -24 0.92 Yes 46 96.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr6 28360785 - NM_001163391 ZSCAN12 1 0.45 0.14 8 4.25 86.01 20 4.75 No 38 0.53 No 0 0 No -55 0.4 No 50 43.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 28360858 - NM_001163391 ZSCAN12 1 1.81 0.61 29 8.91 91.89 34 4.12 No 61 -2.81 No 22 0.72 Yes -22 0.67 Yes 46 65.61 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 28095093 + NM_001320555 ZSCAN16 1 1.15 0.15 9 5.49 89.97 23 5.17 No 10 0.66 No 0 0 No -22 0.55 No 47 77.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr6 28097149 + NM_001320555 ZSCAN16 1 23.8 3.19 64 11.75 87.55 27 9.09 Yes 43 1.09 Yes 0 0 No -26 0.48 No 44 74.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 85157885 + NM_181877 ZSCAN2 1 4.47 0.26 17 1.99 0 35 5.83 Yes 67 0.06 No 0 0 No -29 0.52 No 39 43.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 33958789 + NM_145238 ZSCAN20 1 30.38 2.14 65 4.13 78.56 32 5.94 Yes 19 1.2 Yes 0 0 No -31 0.93 Yes 39 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99648250 + NM_145914 ZSCAN21 1 7.36 0.38 17 1.65 80.31 29 5.29 No 65 -5.34 No 0 0 No -28 0.82 Yes 42 36.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 99649100 + NM_145914 ZSCAN21 1 13.14 0.72 34 6.67 83.82 19 7.07 Yes 6 1.26 Yes 18 0.62 Yes -30 0.73 Yes 52 82.17 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 99649103 + NM_145914 ZSCAN21 1 3.17 0.17 11 5.01 80.64 22 7.28 Yes 9 1.23 Yes 0 0 No -21 0.86 Yes 49 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 99654593 + NM_145914 ZSCAN21 1 1.8 0.13 8 7.85 84.92 27 4.73 No 63 1.13 Yes 22 0.41 Yes -27 0.48 No 43 50.04 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 99655766 + NM_145914 ZSCAN21 1 1.17 0.24 14 5.66 88.23 27 3.92 No 1 0.41 No 0 0 No -26 0.69 Yes 50 62.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 99215757 + NM_145115 ZSCAN25 1 3.65 0.74 36 4.84 83.3 25 5.97 Yes 12 0.83 Yes 24 0.65 Yes -24 0.59 No 46 68.36 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr6 28239799 + NM_001287421 ZSCAN26 1 32.68 2.17 60 3.73 75.8 21 5.04 No 72 0.73 No 0 0 No -30 0.76 Yes 40 61.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr6 28239861 + NM_001287421 ZSCAN26 1 4.65 0.28 16 3.43 71.19 19 5.39 No 44 -3.55 No 0 0 No -22 0.43 No 48 51.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr6 28243907 + NM_001287421 ZSCAN26 1 4.18 0.86 39 10.04 85.86 24 7.5 Yes 67 1.19 Yes 0 0 No -23 0.96 Yes 47 95.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 43656686 - NM_152455 ZSCAN29 1 6.27 2.43 62 9.16 88.32 25 5.41 No 76 -3.61 No 27 0.41 Yes -27 0.75 Yes 43 87.59 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr15 43658973 - NM_152455 ZSCAN29 1 0.52 0.21 13 6.89 81.52 20 6.56 Yes 51 0.64 No 19 0.57 Yes -19 0.64 No 43 67.74 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr15 43659010 - NM_152455 ZSCAN29 1 0.86 0.31 16 2.95 77.3 27 6 Yes 14 0.65 No 29 0.6 Yes -29 0.38 No 46 48.09 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr18 32843205 - NM_001166012 ZSCAN30 1 5.55 0.54 31 12.05 88.27 52 6.86 Yes 39 1.89 Yes 39 0.41 Yes -39 0.45 No 31 61.59 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr18 32843653 - NM_001166012 ZSCAN30 1 1.68 0.38 16 8.71 84.94 28 5.57 Yes 62 0.95 Yes 27 0.7 Yes -27 0.66 No 43 83.23 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr18 32843678 - NM_001166012 ZSCAN30 1 6.52 1.47 54 10.19 82.77 30 5.5 No 37 0.95 Yes 29 0.84 Yes -29 0.79 Yes 41 67.68 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr16 3434936 - NM_017810 ZSCAN32 1 0.75 0.11 8 1.98 0 9 3.87 No 14 1.6 Yes 0 0 No -30 0.82 Yes 40 88.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 3434936 - NM_017810 ZSCAN32 1 1.32 0.19 12 1.98 0 9 3.87 No 14 1.6 Yes 0 0 No -30 0.82 Yes 40 88.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 56733693 - NM_001322069 ZSCAN5A 1 53.94 1.78 62 6.33 86.99 32 8.24 Yes 19 1.3 Yes 28 0.91 Yes -31 0.92 Yes 39 92.63 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr6 28195442 + NM_001199479 ZSCAN9 1 0.96 0.38 20 1.63 71.81 14 4.02 No 58 0.74 No 22 0.91 Yes -22 0.82 Yes 48 68.42 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr20 44511069 + NM_080603 ZSWIM1 1 0.66 0.14 9 10.07 79.53 28 5.97 Yes 51 0.67 No 0 0 No -27 0.66 No 43 82.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 13915681 + NM_023072 ZSWIM4 1 3.61 0.76 36 4.54 79.2 26 4.99 No 71 -3.05 No 0 0 No -25 0.51 No 45 67.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 13932380 + NM_023072 ZSWIM4 1 0.6 0.14 9 11.04 86.66 28 5.66 Yes 69 0.6 No 0 0 No -27 0.74 Yes 43 87.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 60820842 + NM_020928 ZSWIM6 1 3.04 0.39 19 9.92 94.18 30 6.8 Yes 74 -2.59 No 0 0 No -29 0.79 Yes 41 81.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 15883706 - NM_001042697 ZSWIM7 1 2.77 0.57 28 -1.36 57.4 72 8.69 Yes 59 1.39 Yes 18 0.42 Yes -33 0.64 No 28 66.3 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 15890207 - NM_001042697 ZSWIM7 1 5.42 0.96 43 7.86 83.7 24 5.48 No 11 0.13 No 23 0.82 Yes -23 0.87 Yes 47 94.41 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 15894419 - NM_001042697 ZSWIM7 1 0.5 0.11 7 8.08 95.2 23 5.88 Yes 62 -4.26 No 22 0.6 Yes -22 0.62 No 48 63.83 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 75554313 + NM_015037 ZSWIM8 1 58.37 23.81 72 9.82 92.15 22 4.9 No 25 1.8 Yes 22 0.87 Yes -21 0.59 No 49 68.55 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 75555280 + NM_015037 ZSWIM8 1 0.3 0.19 11 4 72.55 70 9.07 Yes 33 1.29 Yes 21 0.74 Yes -24 0.56 No 46 55.28 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr10 75559877 + NM_015037 ZSWIM8 1 0.57 0.26 17 2.49 69.85 54 7.9 Yes 52 2.14 Yes 43 0.21 Yes -45 0.82 Yes 17 77.96 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 75560842 + NM_015037 ZSWIM8 1 6.59 2.25 59 7.57 90.57 19 5 No 6 1.26 Yes 18 0.77 Yes -18 0.65 No 52 72.46 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr10 75561046 + NM_015037 ZSWIM8 1 1.15 0.72 35 6.84 77.81 18 5.91 Yes 65 -3.05 No 23 0.94 Yes -28 0.67 Yes 42 60.77 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr6 116972804 - NM_145062 ZUFSP 1 1.41 0.79 39 5.78 75.61 32 5.57 Yes 13 0.14 No 0 0 No -25 0.87 Yes 45 85.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 116981533 - NM_145062 ZUFSP 1 2.83 1.57 51 6.83 77.9 35 6.24 Yes 45 0.71 No 34 0.4 Yes -35 0.69 Yes 35 80.75 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 116981942 - NM_145062 ZUFSP 1 0.14 0.11 7 6.02 85.68 28 7.92 Yes 35 0.44 No 0 0 No -27 0.92 Yes 43 92.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr6 116988076 - NM_145062 ZUFSP 1 6.16 3.69 67 2.9 0 19 4.44 No 6 0.22 No 18 0.69 Yes -18 0.89 Yes 52 91.04 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr6 116989449 - NM_145062 ZUFSP 1 0.42 0.26 15 5.06 73.04 28 5.51 No 0 1.26 Yes 0 0 No -27 0.75 Yes 43 77.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 113607496 - NM_004724 ZW10 1 1.94 0.9 46 2.29 70.63 28 5.65 Yes 15 0.38 No 27 0.89 Yes -27 0.75 Yes 43 83.04 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 113631685 - NM_004724 ZW10 1 0.27 0.18 12 9.7 90.72 28 6.02 Yes 15 0.6 No 0 0 No -27 0.72 Yes 39 78.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 113632298 - NM_004724 ZW10 1 0.17 0.11 7 7.85 88.03 15 5.37 No 2 0.53 No 0 0 No -25 0.64 No 49 76.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 113643531 - NM_004724 ZW10 1 0.61 0.32 17 8.55 85.02 31 7.87 Yes 18 1.64 Yes 0 0 No -30 0.93 Yes 40 95.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 66801178 + NM_001287821 ZWILCH 1 1628.68 91.88 72 9.68 89.55 39 6.4 Yes 38 0.35 No 21 0.72 Yes -21 0.65 No 49 88.55 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr15 66811220 + NM_001287821 ZWILCH 1 0.16 0.25 16 -0.31 0 30 6.87 Yes 7 0.99 Yes 26 0.57 Yes -30 0.77 Yes 40 62.37 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr15 66840169 + NM_001287821 ZWILCH 1 1.48 1.83 55 5.92 90.11 27 5.2 No 14 0.02 No 0 0 No -26 0.43 No 18 53.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 58117910 - NM_001005413 ZWINT 1 3.11 9.38 72 7.27 79.99 31 6.76 Yes 45 2.19 Yes 0 0 No -30 0.36 No 40 70.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 58118467 - NM_001005413 ZWINT 1 9.29 1.74 51 1.01 0 15 4.58 No 22 1.43 Yes 20 0.43 Yes -40 0.85 Yes 30 91.33 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr10 58118854 - NM_001005413 ZWINT 1 0.07 0.19 12 11.99 88.87 19 5.08 No 6 1.7 Yes 0 0 No -24 0.94 Yes 46 85.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 58119610 - NM_001005413 ZWINT 1 0.22 0.86 33 -1.87 0 35 6.02 Yes 26 1.3 Yes 0 0 No -34 0.5 No 36 88.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 58120863 - NM_001005413 ZWINT 1 0.12 0.28 15 5.74 77.56 25 6.47 Yes 15 0.47 No 0 0 No -27 0.68 Yes 43 61.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 126181344 - NM_001040653 ZXDC 1 1.23 0.68 34 7.52 86.71 33 5.71 Yes 20 1.51 Yes 0 0 No -27 0.68 Yes 43 66.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 53220098 + NM_024646 ZYG11B 1 1.53 0.31 18 6.32 90.14 28 5.29 No 46 0.25 No 0 0 No -58 0.54 No 12 73.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 53222869 + NM_024646 ZYG11B 1 1.77 0.61 28 8.25 87.44 25 6.4 Yes 12 1.38 Yes 0 0 No -24 0.93 Yes 46 93.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 53271142 + NM_024646 ZYG11B 1 0.67 0.21 13 8.75 93.3 28 4.22 No 1 0.42 No 23 0.71 Yes -21 0.7 Yes 49 72.62 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr1 53273508 + NM_024646 ZYG11B 1 0.64 0.22 12 7.76 81.7 28 4.94 No 1 0.95 Yes 0 0 No -27 0.67 Yes 43 82.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 53287117 + NM_024646 ZYG11B 1 0.67 0.21 12 2.96 0 10 4 No 43 0.03 No 0 0 No -40 0.49 No 15 67.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 143078652 + NM_003461 ZYX 1 108.89 26.72 72 2.2 71.82 23 7.07 Yes 10 0.06 No 20 0.71 Yes -22 0.73 Yes 48 68.31 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 143081182 + NM_003461 ZYX 1 0.06 0.11 7 6.7 82.26 27 5.7 Yes 75 0.11 No 23 0.66 Yes -23 0.45 No 49 47.08 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 143086953 + NM_003461 ZYX 1 0.07 0.14 8 3.11 0 34 7.14 Yes 21 1.8 Yes 0 0 No -33 0.92 Yes 37 95.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3917516 - NM_015113 ZZEF1 1 0.64 0.44 22 6.97 83.38 39 5.14 No 26 0.36 No 27 0.92 Yes -26 0.48 No 44 46.92 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 3939367 - NM_015113 ZZEF1 1 0.4 0.31 17 8.58 98.16 28 7.57 Yes 65 1.51 Yes 0 0 No -27 0.79 Yes 43 86.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3966289 - NM_015113 ZZEF1 1 0.2 0.14 9 4.3 74.56 35 6 Yes 29 0.73 No 0 0 No -34 0.88 Yes 36 96.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 3969831 - NM_015113 ZZEF1 1 2 1.47 51 -0.14 0 28 5.3 No 6 0.5 No 0 0 No -27 0.82 Yes 43 82.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 3974741 - NM_015113 ZZEF1 1 7.37 4.96 70 8.67 86.2 22 6.16 Yes 9 1.05 Yes 21 0.75 Yes -21 0.76 Yes 49 72.3 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 3980173 - NM_015113 ZZEF1 1 0.25 0.18 10 6.48 80.15 22 4.89 No 9 0.95 Yes 0 0 No -21 0.76 Yes 49 66.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 3982654 - NM_015113 ZZEF1 1 0.62 0.24 13 8.67 85.08 25 6 Yes 70 1.2 Yes 0 0 No -24 0.95 Yes 46 92.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 3989877 - NM_015113 ZZEF1 1 0.6 0.4 22 8.35 92.12 29 5.27 No NA NA NA 0 0 No -23 0.78 Yes 47 66.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 3992155 - NM_015113 ZZEF1 1 0.98 0.53 33 2.2 83.76 28 4.48 No 56 0.89 Yes 0 0 No -27 0.89 Yes 43 78.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 4008089 - NM_015113 ZZEF1 1 0.35 0.31 18 5.62 86.28 22 5.1 No 46 0.48 No 0 0 No -21 0.94 Yes 49 96.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 4029915 - NM_015113 ZZEF1 1 0.56 0.24 15 7.8 82.4 18 5.74 Yes 5 0.9 Yes 0 0 No -24 0.56 No 46 54.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 78045308 - NM_015534 ZZZ3 1 0.12 0.13 9 -7.64 0 9 3.87 No 69 0.14 No 0 0 No -46 0.36 No 17 61.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 78047574 - NM_015534 ZZZ3 1 44.97 23.11 72 6.29 89 33 6.08 Yes 20 0.1 No 29 0.86 Yes -33 0.74 Yes 37 68.07 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 78050515 - NM_015534 ZZZ3 1 0.77 0.6 33 8.58 89.54 18 6.4 Yes 5 2.15 Yes 18 0.31 Yes -17 0.59 No 53 69.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 78050515 - NM_015534 ZZZ3 1 0.15 0.11 7 8.58 89.54 18 6.4 Yes 5 2.15 Yes 18 0.31 Yes -17 0.59 No 53 69.98 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr1 78063502 - NM_015534 ZZZ3 1 0.28 0.19 10 10.56 95.02 21 6.23 Yes 8 1.51 Yes 0 0 No -25 0.79 Yes 45 79.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 78092123 - NM_015534 ZZZ3 1 0.64 0.46 25 10.28 85.3 32 4.89 No 19 1.41 Yes 0 0 No -31 0.64 No 39 84.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 78102756 - NM_015534 ZZZ3 1 0.75 0.54 27 2.14 77.49 26 4.97 No 0 0.34 No 0 0 No -25 0.77 Yes 45 48.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 78105278 - NM_015534 ZZZ3 1 0.36 0.24 13 -3.33 0 14 4.08 No 28 1.11 Yes 0 0 No -53 0.49 No 17 54.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 78105278 - NM_015534 ZZZ3 1 0.25 0.15 10 -3.33 0 14 4.08 No 28 1.11 Yes 0 0 No -53 0.49 No 17 54.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 78107124 - NM_015534 ZZZ3 1 0.31 0.19 12 2.04 0 11 4.12 No 11 0.42 No 0 0 No -27 0.88 Yes 43 80.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 78107144 - NM_015534 ZZZ3 1 0.19 0.14 8 -4.1 64.94 12 4.26 No 56 -5.82 No 19 0.82 Yes -22 0.29 No 59 34.44 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr1 78143016 - NM_015534 ZZZ3 1 2.66 0.31 17 1.51 0 33 6.19 Yes 20 0.29 No 26 0.81 Yes -28 0.6 No 42 66.87 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 69023667 + NM_133509 RAD51B 0 . . . 4.47 79.08 23 5 No 13 1.41 Yes 0 0 No -22 0.78 Yes 45 95.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68962101 + NM_133509 RAD51B 0 . . . 4.37 70.3 18 4.62 No 63 0.42 No 0 0 No -48 0.52 No 41 74.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59835432 - NM_032043 BRIP1 0 . . . 1.45 80.34 27 5.39 No 59 0.64 No 0 0 No -22 0.53 No 48 76.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94217101 - NM_005591 MRE11 0 . . . 3.84 79.08 17 5.57 Yes -3 0.67 No 0 0 No -27 0.56 No 36 71.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108118211 + NM_000051 ATM 0 . . . 4.01 76.17 21 5.1 No 76 -3.22 No 0 0 No -25 0.44 No 45 66.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68725446 + NM_133509 RAD51B 0 . . . 7.17 81.65 14 5.66 Yes 58 1 Yes 0 0 No -27 0.68 Yes 48 48.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68988965 + NM_133509 RAD51B 0 . . . 3.28 69.07 64 8.13 Yes 10 1.45 Yes 0 0 No -31 0.55 No 42 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21993703 - NM_000077 CDKN2A 0 . . . 7.72 91.4 20 5.1 No 28 1.59 Yes 0 0 No -25 0.65 No 48 63.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69142998 + NM_133509 RAD51B 0 . . . 5.53 75.11 22 6.24 Yes 55 0.58 No 0 0 No -21 0.97 Yes 45 68.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6044802 - NM_000535 PMS2 0 . . . 0.5 72.99 25 4.82 No 41 -1.95 No 0 0 No -25 0.97 Yes 54 63.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59782750 - NM_032043 BRIP1 0 . . . 5.29 83.2 34 4.18 No 71 0.4 No 0 0 No -23 0.87 Yes 51 64.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68750799 + NM_133509 RAD51B 0 . . . 7.9 84.95 16 4.82 No 6 1.32 Yes 0 0 No -33 0.66 Yes 46 66.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41016723 + NM_001164269 RAD51 0 . . . 9.12 86.91 20 5.1 No 19 1.46 Yes 0 0 No -39 0.48 No 39 95.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104166588 - NM_001100119 XRCC3 0 . . . 5.33 78.88 61 7.9 Yes 60 0.42 No 0 0 No -23 0.87 Yes 43 70.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47758277 + NM_000251 MSH2 0 . . . 1.93 57.14 16 5.2 No 63 0.68 No 0 0 No -20 0.76 Yes 46 62.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89724092 + NM_000314 PTEN 0 . . . 1.42 66.72 23 4.9 No 45 -1.24 No 0 0 No -25 0.62 No 20 28.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29121865 - NM_001005735 CHEK2 0 . . . 1.8 0 32 6.16 Yes 7 1.47 Yes 0 0 No -31 0.66 No 39 41.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68538015 + NM_133509 RAD51B 0 . . . 0.46 0 48 5.69 Yes 14 1.3 Yes 0 0 No -19 0.56 No 52 53.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47694540 + NM_000251 MSH2 0 . . . 4.82 71.34 21 5.37 No 21 1.76 Yes 0 0 No -20 0.84 Yes 37 84.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21995101 - NM_000077 CDKN2A 0 . . . 5.78 73.67 30 5.11 No NA NA NA 0 0 No -19 0.39 No 51 37.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29083589 - NM_001005735 CHEK2 0 . . . 5.67 89.47 29 7.35 Yes 56 1.47 Yes 0 0 No -28 0.96 Yes 49 94.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6025564 - NM_000535 PMS2 0 . . . 4.57 87.8 20 5.33 No 13 1.19 Yes 0 0 No -26 0.68 Yes 45 95.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68717665 + NM_133509 RAD51B 0 . . . 3.87 75.59 18 5.38 No 29 -2.14 No 0 0 No -24 0.7 Yes 44 67.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68974860 + NM_133509 RAD51B 0 . . . 4.6 82.53 23 4.84 No 5 1.4 Yes 0 0 No -31 0.79 Yes 53 76.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68550834 + NM_133509 RAD51B 0 . . . 2.68 66.06 36 6.23 Yes -1 0.44 No 0 0 No -35 0.88 Yes 46 64.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152356055 - NM_005431 XRCC2 0 . . . 1.19 72.91 25 5.35 No 11 0.51 No 0 0 No -22 0.48 No 47 75.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68711766 + NM_133509 RAD51B 0 . . . 4.01 72.3 21 5.18 No 18 1.05 Yes 0 0 No -30 0.45 No 40 51.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68748649 + NM_133509 RAD51B 0 . . . 2.66 75.55 22 5.2 No 69 1.57 Yes 0 0 No -21 0.89 Yes 47 83.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68328463 + NM_133509 RAD51B 0 . . . 7.94 86.01 9 3.87 No 4 0.29 No 0 0 No -31 0.59 No 45 38.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68996150 + NM_133509 RAD51B 0 . . . 6.69 84.8 32 6.51 Yes 59 1.2 Yes 0 0 No -31 0.55 No 55 54.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59770456 - NM_032043 BRIP1 0 . . . 5.26 80.93 28 4.9 No 3 1.28 Yes 0 0 No -23 0.63 No 37 64.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89641404 + NM_000314 PTEN 0 . . . 3.04 62.9 19 5 No 39 0.43 No 0 0 No -59 0.78 Yes 42 66.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215613397 - NM_000465 BARD1 0 . . . 2.68 81.8 31 6.37 Yes 53 1.31 Yes 0 0 No -30 0.56 No 51 33.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215661121 - NM_000465 BARD1 0 . . . 1.88 74.29 34 5.35 No 48 0.68 No 0 0 No -28 0.41 No 47 70.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32889125 + NM_000059 BRCA2 0 . . . 0.61 69.54 11 5 No 7 0.27 No 0 0 No -42 0.46 No 51 52.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59767825 - NM_032043 BRIP1 0 . . . 3.23 76.31 41 6.48 Yes 3 1.03 Yes 0 0 No -26 0.7 Yes 50 64.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69041127 + NM_133509 RAD51B 0 . . . 5.14 84.13 19 5.47 No 37 -1.64 No 0 0 No -18 0.36 No 49 84.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68397251 + NM_133509 RAD51B 0 . . . 6.11 76.81 12 4.32 No 5 1.33 Yes 0 0 No -25 0.74 Yes 48 51.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37072502 + NM_000249 MLH1 0 . . . 6.48 74.74 13 5.09 No -4 0.63 No 0 0 No -23 0.4 No 45 84.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68660447 + NM_133509 RAD51B 0 . . . 4.65 79.06 18 4.86 No 2 1.2 Yes 0 0 No -17 0.3 No 49 67.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47732117 + NM_000251 MSH2 0 . . . 3.83 71.4 18 4.9 No 5 1.37 Yes 0 0 No -25 0.47 No 40 77.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68306203 + NM_133509 RAD51B 0 . . . 5.89 81.5 30 5.39 No 68 0.3 No 0 0 No -41 0.42 No 42 74.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69028504 + NM_133509 RAD51B 0 . . . 4.72 83.51 28 5.72 Yes 20 0.59 No 0 0 No -21 0.6 No 54 61.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68457862 + NM_133509 RAD51B 0 . . . 6.17 79.95 32 5.66 Yes 18 0.88 Yes 0 0 No -31 0.39 No 40 97.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89659908 + NM_000314 PTEN 0 . . . 3.65 69.29 17 4.62 No 58 0.34 No 0 0 No -24 0.81 Yes 33 60.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75514875 - NM_001040108 MLH3 0 . . . 2.29 66.4 21 6.63 Yes 60 -4.62 No 0 0 No -26 0.67 Yes 45 74.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68908417 + NM_133509 RAD51B 0 . . . 6.43 76.96 16 5.29 No 18 0.58 No 0 0 No -23 0.83 Yes 52 42.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215627068 - NM_000465 BARD1 0 . . . 0.15 68.46 16 5.1 No 19 0.71 No 0 0 No -19 0.29 No 39 58.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68346204 + NM_133509 RAD51B 0 . . . 5.04 84.17 12 5.1 No 56 1.77 Yes 0 0 No -29 0.59 No 12 51.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33432653 - NM_002878 RAD51D 0 . . . 3.07 68.64 28 5.37 No 3 0.03 No 0 0 No -27 0.51 No 43 66.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40989160 + NM_001164269 RAD51 0 . . . 2.28 66.86 37 6.88 Yes 47 0.98 Yes 0 0 No -36 0.74 Yes 23 62.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215621846 - NM_000465 BARD1 0 . . . 6.27 85.16 16 5.1 No 0 0.19 No 0 0 No -19 0.72 Yes 50 85.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152355788 - NM_005431 XRCC2 0 . . . 0.93 55.97 33 6.24 Yes 67 -5.82 No 0 0 No -58 0.5 No 61 20.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6027600 - NM_000535 PMS2 0 . . . 1.71 71.5 34 5.92 Yes 16 1.08 Yes 0 0 No -33 0.63 No 42 92.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215618412 - NM_000465 BARD1 0 . . . 0.82 71.28 14 4.39 No 7 1.52 Yes 0 0 No -43 0.6 No 44 76.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37080333 + NM_000249 MLH1 0 . . . 0.54 0 14 4.89 No 12 1.07 Yes 0 0 No -24 0.46 No 38 82.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108217646 + NM_000051 ATM 0 . . . 1.93 74.34 18 5.57 Yes -2 0.67 No 0 0 No -17 0.48 No 45 82.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59759937 - NM_032043 BRIP1 0 . . . 7.5 80.76 22 4.33 No 68 0.57 No 0 0 No -25 0.77 Yes 46 66.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89681353 + NM_000314 PTEN 0 . . . 10.25 90.67 18 4.43 No 42 -1.48 No 0 0 No -18 0.7 Yes 46 80.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21987263 - NM_000077 CDKN2A 0 . . . 1.05 0 26 4.24 No 10 0.91 Yes 0 0 No -25 0.8 Yes 39 70.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47681539 + NM_000251 MSH2 0 . . . 1.37 79.13 24 5.1 No 67 -4.96 No 0 0 No -23 0.69 Yes 43 59.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47707116 + NM_000251 MSH2 0 . . . 2.05 71.34 19 3.67 No 23 0.79 Yes 0 0 No -26 0.6 No 35 48.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41236755 - NM_007294 BRCA1 0 . . . 3.89 78.44 21 5.18 No 66 -4.33 No 0 0 No -32 0.24 No 35 62.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37050866 + NM_000249 MLH1 0 . . . 2.17 83.51 28 6.36 Yes 74 1.68 Yes 0 0 No -25 0.26 No 18 35.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29127046 - NM_001005735 CHEK2 0 . . . 1.9 73.25 23 5.74 Yes 52 0.58 No 0 0 No -22 0.57 No 46 39.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68400670 + NM_133509 RAD51B 0 . . . 9.18 87.91 16 5.2 No 51 0.79 Yes 0 0 No -20 0.54 No 51 65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89675919 + NM_000314 PTEN 0 . . . 6.5 81.59 67 8.7 Yes NA NA NA 0 0 No -38 0.2 No 25 67.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47799100 + NM_000251 MSH2 0 . . . 4.52 76.88 70 9.33 Yes 62 -1.81 No 0 0 No -23 0.54 No 37 37.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047925 + NM_000249 MLH1 0 . . . 2.3 74.78 48 5.26 No 10 0.47 No 0 0 No -45 0.66 No 48 64.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89716538 + NM_000314 PTEN 0 . . . 8.11 85.5 19 5.83 Yes 15 1.11 Yes 0 0 No -27 0.84 Yes 43 72.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68950171 + NM_133509 RAD51B 0 . . . 8.17 81.84 17 5.17 No 10 0.82 Yes 0 0 No -21 0.59 No 48 88.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89658175 + NM_000314 PTEN 0 . . . 3 0 28 6.64 Yes 4 -1.51 No 0 0 No -27 0.72 Yes 54 45.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68781186 + NM_133509 RAD51B 0 . . . 7.48 87.66 32 5.74 Yes 69 0.86 Yes 0 0 No -31 0.66 No 49 84.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47653606 + NM_000251 MSH2 0 . . . 2.24 80.12 31 5.83 Yes 7 1.02 Yes 0 0 No -30 0.74 Yes 51 87.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69021684 + NM_133509 RAD51B 0 . . . 0.67 81.86 13 3.92 No 76 1.56 Yes 0 0 No -20 0.59 No 50 42.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68778176 + NM_004360 CDH1 0 . . . 1.91 74.44 39 5.9 Yes 23 0.29 No 0 0 No -22 0.68 Yes 35 80.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84401888 - NM_139076 FAM175A 0 . . . 1.23 71.76 21 5.2 No 21 0.37 No 0 0 No -20 0.38 No 40 38.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190726123 + NM_000534 PMS1 0 . . . 7.53 84.82 15 4.12 No 35 1.23 Yes 0 0 No -14 0.71 Yes 35 45.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68390864 + NM_133509 RAD51B 0 . . . 1.62 62.51 29 5.21 No 42 1.37 Yes 0 0 No -32 0.69 Yes 16 48.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23646648 - NM_024675 PALB2 0 . . . 9.8 91.61 19 4.93 No 9 0.83 Yes 0 0 No -18 0.54 No 49 86.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47738380 + NM_000251 MSH2 0 . . . 10.96 86.13 25 4.73 No 12 1.38 Yes 0 0 No -27 0.61 No 46 79.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68364815 + NM_133509 RAD51B 0 . . . 0.21 64.01 13 4.36 No 56 -2.56 No 0 0 No -30 0.65 No 26 52.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94211688 - NM_005591 MRE11 0 . . . 1 0 22 5.1 No 40 0.31 No 0 0 No -21 0.79 Yes 39 79.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68414584 + NM_133509 RAD51B 0 . . . 1.59 74.34 30 6.7 Yes 74 0.7 No 0 0 No -25 0.57 No 49 78.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68929371 + NM_133509 RAD51B 0 . . . 4.06 70.43 28 5.21 No 32 0.73 No 0 0 No -27 0.91 Yes 41 77.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68506429 + NM_133509 RAD51B 0 . . . 0.45 74.88 30 6.54 Yes 74 0.62 No 0 0 No -29 0.78 Yes 49 31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89624911 + NM_000314 PTEN 0 . . . 1.95 70.39 27 5.13 No 51 -2.7 No 0 0 No -26 0.7 Yes 45 68.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108116377 + NM_000051 ATM 0 . . . 1.53 79.46 20 5.53 No 51 0.78 Yes 0 0 No -25 0.54 No 55 51.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59911112 - NM_032043 BRIP1 0 . . . 4.72 67.53 20 6.24 Yes 19 0.61 No 0 0 No -19 0.87 Yes 39 68.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59825143 - NM_032043 BRIP1 0 . . . 1.14 81.08 35 5.95 Yes 58 -3.79 No 0 0 No -34 0.5 No 47 65.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32964039 + NM_000059 BRCA2 0 . . . 0.3 0 31 4.77 No 62 1.06 Yes 0 0 No -30 0.73 Yes 14 31.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47712627 + NM_000251 MSH2 0 . . . 2.06 68.86 55 6.91 Yes 63 -1.33 No 0 0 No -54 0.43 No 43 69.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47651767 + NM_000251 MSH2 0 . . . 3.15 68.34 31 5.74 Yes 21 1.56 Yes 0 0 No -30 0.9 Yes 37 87.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59892071 - NM_032043 BRIP1 0 . . . 3.25 77.33 18 4.8 No 47 0.73 No 0 0 No -25 0.45 No 52 67.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105209674 + NM_021930 RINT1 0 . . . 4.11 66.76 18 5.74 Yes 15 0.84 Yes 0 0 No -26 0.72 Yes 43 95.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190732307 + NM_000534 PMS1 0 . . . 5.07 74.42 42 7.41 Yes -3 0.35 No 0 0 No -41 0.54 No 40 36.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59914232 - NM_032043 BRIP1 0 . . . 6.38 78.35 41 5.57 Yes 27 1.47 Yes 0 0 No -25 0.58 No 40 76.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41017115 + NM_001164269 RAD51 0 . . . 3.01 0 40 7.67 Yes 61 2.31 Yes 0 0 No -39 0.81 Yes 31 58.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215655928 - NM_000465 BARD1 0 . . . 1.2 0 28 5.27 No 59 0.57 No 0 0 No -27 0.62 No 32 60.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7568919 - NM_000546 TP53 0 . . . 1.42 72.26 21 5.1 No 30 1.19 Yes 0 0 No -25 0.47 No 28 71.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68611845 + NM_133509 RAD51B 0 . . . 6.95 81.02 22 7.21 Yes 19 0.55 No 0 0 No -31 0.63 No 39 86.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68664139 + NM_133509 RAD51B 0 . . . 1.92 75.55 28 7.23 Yes 48 0.97 Yes 0 0 No -28 0.54 No 50 36.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152374338 - NM_005431 XRCC2 0 . . . 6.83 83.54 18 4.98 No 28 1.24 Yes 0 0 No -27 0.91 Yes 44 74.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7567814 - NM_000546 TP53 0 . . . 2.38 68.01 14 5.37 No 6 0.25 No 0 0 No -20 0.42 No 52 42.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68988772 + NM_133509 RAD51B 0 . . . 2.52 70.28 26 3.61 No 52 0.76 No 0 0 No -25 0.43 No 50 74.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108166172 + NM_000051 ATM 0 . . . 1.33 85.37 21 5.82 Yes 76 1.47 Yes 0 0 No -32 0.69 Yes 50 82.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68835804 + NM_133509 RAD51B 0 . . . 6.35 80.66 20 5.57 Yes 28 1.05 Yes 0 0 No -19 0.6 No 53 49.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190692780 + NM_000534 PMS1 0 . . . 1.4 0 25 5.11 No 20 1.19 Yes 0 0 No -24 0.72 Yes 38 70.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69016801 + NM_133509 RAD51B 0 . . . 10.12 88.11 25 6.78 Yes 0 1.71 Yes 0 0 No -30 0.41 No 42 75.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68589572 + NM_133509 RAD51B 0 . . . 2.12 66.14 62 8.03 Yes 61 -5.08 No 0 0 No -28 0.85 Yes 41 86.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89687859 + NM_000314 PTEN 0 . . . 1.47 67.26 23 5.39 No 75 1.43 Yes 0 0 No -48 0.79 Yes 39 49.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37047356 + NM_000249 MLH1 0 . . . 0.4 0 26 4.23 No 76 1.41 Yes 0 0 No -24 0.28 No 41 60.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215594203 - NM_000465 BARD1 0 . . . 1.47 75.2 30 5.43 No 37 0.79 Yes 0 0 No -30 0.73 Yes 45 83.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59934252 - NM_032043 BRIP1 0 . . . 1.28 62.16 15 4.58 No 60 0.69 No 0 0 No -41 0.55 No 47 50.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108209885 + NM_000051 ATM 0 . . . 0.36 72.07 29 4.97 No -1 0.14 No 0 0 No -28 0.65 No 59 72.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68831723 + NM_133509 RAD51B 0 . . . 6.65 69.74 15 4.58 No -1 2 Yes 0 0 No -57 0.63 No 59 62.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68525796 + NM_133509 RAD51B 0 . . . 5.6 86.8 29 5.74 Yes 35 1.93 Yes 0 0 No -28 0.73 Yes 49 85.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108160235 + NM_000051 ATM 0 . . . 3.54 67.6 17 6.4 Yes 59 1.01 Yes 0 0 No -16 0.57 No 44 80.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89658671 + NM_000314 PTEN 0 . . . 4.18 70.73 20 5.1 No 74 0.93 Yes 0 0 No -19 0.49 No 41 61.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68621598 + NM_133509 RAD51B 0 . . . 3.62 77.34 12 4.9 No 63 0.8 Yes 0 0 No -39 0.89 Yes 40 78.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59858249 - NM_032043 BRIP1 0 . . . 0.66 71.29 24 4.8 No 53 -4.9 No 0 0 No -23 0.75 Yes 52 25.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108212509 + NM_000051 ATM 0 . . . 1.31 66.29 30 4.42 No 35 0.76 No 0 0 No -29 0.44 No 42 37.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23617530 - NM_024675 PALB2 0 . . . 2.7 80.49 31 5.25 No 37 1.3 Yes 0 0 No -30 0.57 No 21 70.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32952578 + NM_000059 BRCA2 0 . . . 3.95 81.49 18 5.74 Yes 49 0.84 Yes 0 0 No -20 0.43 No 42 49.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68884064 + NM_133509 RAD51B 0 . . . 2.26 70.09 57 7.9 Yes 51 -2.24 No 0 0 No -26 0.53 No 52 75.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152359447 - NM_005431 XRCC2 0 . . . 2.82 0 23 5.03 No 54 0.92 Yes 0 0 No -22 0.91 Yes 50 41.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68607382 + NM_133509 RAD51B 0 . . . 2.37 73.81 42 8.1 Yes 51 0.83 Yes 0 0 No -42 0.36 No 48 44.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68356935 + NM_133509 RAD51B 0 . . . 0.22 63.32 36 6.08 Yes 69 1.27 Yes 0 0 No -35 0.59 No 29 65.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21990280 - NM_000077 CDKN2A 0 . . . 0.29 68.41 23 4.8 No 57 -4.41 No 0 0 No -22 0.96 Yes 43 51.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215663541 - NM_000465 BARD1 0 . . . 1.21 64.26 16 5.04 No 61 1.71 Yes 0 0 No -20 0.68 Yes 39 65.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68343591 + NM_133509 RAD51B 0 . . . 2.78 80.04 14 5.39 No 72 -1.75 No 0 0 No -22 0.64 No 41 70.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69082883 + NM_133509 RAD51B 0 . . . 5.18 76.54 21 5.2 No -1 0.4 No 0 0 No -55 0.76 Yes 44 73.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108210783 + NM_000051 ATM 0 . . . 5.26 77.04 16 4.69 No 28 0.42 No 0 0 No -20 0.42 No 49 91.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131905579 + NM_005732 RAD50 0 . . . 0.31 56.94 26 5.39 No 71 -5.85 No 0 0 No -23 0.38 No 33 60.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59892406 - NM_032043 BRIP1 0 . . . 4.12 78.01 23 5.04 No -1 -1.33 No 0 0 No -42 0.38 No 46 77.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41226068 - NM_007294 BRCA1 0 . . . 0.23 0 20 5.02 No 76 1.06 Yes 0 0 No -19 0.62 No 44 66.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68682630 + NM_133509 RAD51B 0 . . . 5 69.47 36 5.91 Yes 68 0.71 No 0 0 No -25 0.72 Yes 41 66.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68497249 + NM_133509 RAD51B 0 . . . 4.27 80.92 34 5.71 Yes -1 1.76 Yes 0 0 No -27 0.8 Yes 50 61.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29089901 - NM_001005735 CHEK2 0 . . . 6.6 78.2 28 4.79 No -2 1.12 Yes 0 0 No -22 0.76 Yes 47 79.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94223388 - NM_005591 MRE11 0 . . . 0.79 78.61 16 5.27 No 60 -4.53 No 0 0 No -15 0.36 No 55 47.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69054449 + NM_133509 RAD51B 0 . . . 1.35 80.32 21 6.18 Yes 30 -0.44 No 0 0 No -29 0.56 No 53 46.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68900789 + NM_133509 RAD51B 0 . . . 3.65 73.38 22 5.74 Yes 3 -0.27 No 0 0 No -21 0.56 No 46 31.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32924293 + NM_000059 BRCA2 0 . . . 1.92 70.83 9 3.87 No 52 -0.86 No 0 0 No -34 0.37 No 33 56.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59902226 - NM_032043 BRIP1 0 . . . 6.11 88.74 21 7.33 Yes 64 0.7 No 0 0 No -20 0.91 Yes 50 67.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108153108 + NM_000051 ATM 0 . . . 5.51 82.11 16 3.27 No 68 1.03 Yes 0 0 No -14 0.5 No 50 87.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32907050 + NM_000059 BRCA2 0 . . . 4.24 78.9 32 5.17 No 59 -5.26 No 0 0 No -31 0.46 No 52 56.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68582555 + NM_133509 RAD51B 0 . . . 4.83 82.5 30 5.83 Yes 61 -2.56 No 0 0 No -29 0.89 Yes 46 84.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68293722 + NM_133509 RAD51B 0 . . . 6.58 93.68 27 5.2 No 72 0.85 Yes 0 0 No -26 0.68 Yes 47 59.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68822901 + NM_133509 RAD51B 0 . . . 0.09 74.68 77 9.43 Yes 4 0.41 No 0 0 No -70 0.05 No 54 75.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68479864 + NM_133509 RAD51B 0 . . . 8.24 80.86 33 5.99 Yes 9 0.59 No 0 0 No -32 0.88 Yes 41 56.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75490951 - NM_001040108 MLH3 0 . . . 3.27 80.22 14 6.77 Yes 67 -4.96 No 0 0 No -23 0.27 No 43 47.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59919804 - NM_032043 BRIP1 0 . . . 4.46 73.95 32 5.74 Yes 24 0.87 Yes 0 0 No -31 0.36 No 34 77.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32945637 + NM_000059 BRCA2 0 . . . 4.97 77.59 30 4.73 No 44 0.79 Yes 0 0 No -30 0.73 Yes 25 61.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68508831 + NM_133509 RAD51B 0 . . . 8.79 91.14 34 6.67 Yes 0 0.51 No 0 0 No -28 0.66 No 38 84.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215666091 - NM_000465 BARD1 0 . . . 0.85 77.25 23 4.9 No 17 0.54 No 0 0 No -22 0.59 No 51 73.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69062460 + NM_133509 RAD51B 0 . . . 2.86 70.6 24 5.1 No 66 -4.25 No 0 0 No -23 0.52 No 46 50.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47636180 + NM_000251 MSH2 0 . . . 1.73 78.21 14 4.78 No 75 -5.24 No 0 0 No -36 0.73 Yes 49 36.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68781930 + NM_004360 CDH1 0 . . . 3.72 70.43 12 5.37 No 18 0.53 No 0 0 No -57 0.42 No 40 80.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59863283 - NM_032043 BRIP1 0 . . . 4.49 73.55 28 4.55 No 46 1.81 Yes 0 0 No -31 0.27 No 38 90.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105174384 + NM_021930 RINT1 0 . . . 2.67 75.72 33 7.14 Yes 26 1.62 Yes 0 0 No -32 0.55 No 32 53.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69096490 + NM_133509 RAD51B 0 . . . 0.66 64.25 33 6.68 Yes 26 0.65 No 0 0 No -32 0.4 No 47 29.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69045698 + NM_133509 RAD51B 0 . . . 1.65 72.51 10 5.48 No 7 1.26 Yes 0 0 No -23 0.59 No 51 63.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68957214 + NM_133509 RAD51B 0 . . . 3.69 81.7 23 5.14 No 3 0.59 No 0 0 No -22 0.49 No 45 91.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68294299 + NM_133509 RAD51B 0 . . . 5.51 75.82 23 5 No 43 -2.34 No 0 0 No -25 0.56 No 49 53.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68637423 + NM_133509 RAD51B 0 . . . 4.5 86.19 17 5.5 No 28 0.16 No 0 0 No -26 0.41 No 43 68.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68306047 + NM_133509 RAD51B 0 . . . 2.97 75.52 21 4.47 No 14 1.15 Yes 0 0 No -21 0.57 No 44 85.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215630592 - NM_000465 BARD1 0 . . . 2.44 69.54 32 5.74 Yes 53 0.63 No 0 0 No -28 0.47 No 37 56.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68975722 + NM_133509 RAD51B 0 . . . 5.84 73.89 27 4.47 No 18 1.05 Yes 0 0 No -24 0.82 Yes 37 53.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90974488 - NM_002485 NBN 0 . . . 2.83 68.97 41 8.07 Yes 31 0.85 Yes 0 0 No -40 0.77 Yes 27 69.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68538003 + NM_133509 RAD51B 0 . . . 7.03 76.34 27 5.28 No 2 1.28 Yes 0 0 No -27 0.56 No 38 52.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68801390 + NM_133509 RAD51B 0 . . . 1.43 62.24 25 5.1 No 1 0.08 No 0 0 No -24 0.51 No 32 72.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131902685 + NM_005732 RAD50 0 . . . 2.5 62.55 22 4.9 No 59 0.25 No 0 0 No -21 0.79 Yes 45 78.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190724172 + NM_000534 PMS1 0 . . . 1.28 66.6 20 4.74 No 14 0.38 No 0 0 No -25 0.66 No 41 83.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68333298 + NM_133509 RAD51B 0 . . . 1.75 63.72 47 7.24 Yes 25 1.08 Yes 0 0 No -39 0.68 Yes 27 76.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68695205 + NM_133509 RAD51B 0 . . . 4.54 75.71 31 7.84 Yes 45 0.75 No 0 0 No -30 0.6 No 39 44.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68833793 + NM_133509 RAD51B 0 . . . 2.16 0 24 6.31 Yes 33 1.28 Yes 0 0 No -26 0.56 No 55 54.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23634300 - NM_024675 PALB2 0 . . . 1.75 78.66 10 5.23 No -2 0.23 No 0 0 No -28 0.46 No 46 43.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68623625 + NM_133509 RAD51B 0 . . . 3.43 69.05 47 7.05 Yes 66 0.75 No 0 0 No -28 0.37 No 44 77.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69151643 + NM_133509 RAD51B 0 . . . 2.79 78.38 17 4.79 No 14 0.21 No 0 0 No -20 0.62 No 46 39.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68979848 + NM_133509 RAD51B 0 . . . 3.36 0 38 6.6 Yes 16 0.91 Yes 0 0 No -22 0.57 No 42 89.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104164658 - NM_001100119 XRCC3 0 . . . 7.14 80.49 22 5.29 No 5 1.03 Yes 0 0 No -22 0.58 No 53 46.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68466826 + NM_133509 RAD51B 0 . . . 2.95 79.53 16 4.69 No 16 1.14 Yes 0 0 No -30 0.35 No 53 39.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68313496 + NM_133509 RAD51B 0 . . . 4.24 78.76 20 7.07 Yes 35 0.01 No 0 0 No -19 0.69 Yes 42 55.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68582429 + NM_133509 RAD51B 0 . . . 4.06 76.12 32 5.63 Yes -4 0.45 No 0 0 No -27 0.59 No 52 34.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21993607 - NM_000077 CDKN2A 0 . . . 1.79 56.74 12 4.23 No 69 0.98 Yes 0 0 No -20 0.76 Yes 65 25.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68445572 + NM_133509 RAD51B 0 . . . 2.81 73.86 20 5.53 No 37 1.12 Yes 0 0 No -32 0.42 No 44 85.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37072593 + NM_000249 MLH1 0 . . . 0.41 68.04 17 2.64 No 0 1.01 Yes 0 0 No -20 0.87 Yes 49 84.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37045750 + NM_000249 MLH1 0 . . . 0.67 64.39 52 7.36 Yes 17 0.88 Yes 0 0 No -22 0.62 No 41 64.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32971256 + NM_000059 BRCA2 0 . . . 4.62 71.53 18 4.69 No 56 -3.72 No 0 0 No -17 0.68 Yes 45 53.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89706322 + NM_000314 PTEN 0 . . . 2.82 84.39 27 5.2 No 41 0.45 No 0 0 No -26 0.78 Yes 52 80 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48010102 + NM_000179 MSH6 0 . . . 0.4 70.72 20 4.92 No 40 -3.49 No 0 0 No -19 0.51 No 33 40.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68561534 + NM_133509 RAD51B 0 . . . 0.72 71.21 33 6.05 Yes 71 -6.87 No 0 0 No -32 0.54 No 52 33.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105180945 + NM_021930 RINT1 0 . . . 1.3 74.01 30 6.16 Yes 5 0.73 No 0 0 No -33 0.46 No 41 67.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7585889 - NM_000546 TP53 0 . . . 1.04 0 28 5.38 No 75 -2.59 No 0 0 No -27 0.85 Yes 52 66.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68930035 + NM_133509 RAD51B 0 . . . 1.04 62.8 18 5.74 Yes 17 0.26 No 0 0 No -26 0.77 Yes 38 64.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68514807 + NM_133509 RAD51B 0 . . . 1.18 77.3 25 5.02 No 2 0.33 No 0 0 No -35 0.59 No 56 37.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190681270 + NM_000534 PMS1 0 . . . 0.86 70.8 17 5.45 No 11 0.82 Yes 0 0 No -28 0.78 Yes 18 43.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190712338 + NM_000534 PMS1 0 . . . 5.93 87.12 15 6.48 Yes 3 0.58 No 0 0 No -20 0.46 No 39 45.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29100242 - NM_001005735 CHEK2 0 . . . 1.63 73.01 29 8.15 Yes 71 -5.41 No 0 0 No -28 0.63 No 45 87.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59805151 - NM_032043 BRIP1 0 . . . 2.82 69.7 25 5.39 No 4 -1.95 No 0 0 No -24 0.75 Yes 40 68.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108129352 + NM_000051 ATM 0 . . . 2.47 69.66 28 6.42 Yes 76 0.73 No 0 0 No -27 0.62 No 46 64.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68299262 + NM_133509 RAD51B 0 . . . 9.43 87.26 19 5.74 Yes 74 1.18 Yes 0 0 No -18 0.49 No 44 74.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68639110 + NM_133509 RAD51B 0 . . . 3.03 0 18 4.8 No 60 1.68 Yes 0 0 No -21 0.64 No 45 84.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68764684 + NM_133509 RAD51B 0 . . . 4.61 79.88 31 5.65 Yes 12 1.94 Yes 0 0 No -30 0.82 Yes 46 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52436006 - NM_004656 BAP1 0 . . . 1.7 70.95 12 5.39 No NA NA NA 0 0 No -28 0.32 No 44 33.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207591 - NM_007294 BRCA1 0 . . . 4.58 79.28 20 4.69 No 37 -4.52 No 0 0 No -23 0.53 No 47 45.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47634773 + NM_000251 MSH2 0 . . . 0.13 76 29 5.74 Yes 73 0.9 Yes 0 0 No -29 0.84 Yes 52 37.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68598056 + NM_133509 RAD51B 0 . . . 2.19 68.05 26 6.03 Yes 55 0.05 No 0 0 No -25 0.66 No 50 46.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1211005 + NM_000455 STK11 0 . . . 3.77 64.36 19 7.06 Yes 12 0.68 No 0 0 No -31 0.34 No 38 54.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108142254 + NM_000051 ATM 0 . . . 1.92 72.75 16 4.35 No 19 1.41 Yes 0 0 No -15 0.44 No 49 68.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68362184 + NM_133509 RAD51B 0 . . . 3.96 65.62 46 6.52 Yes 24 0.83 Yes 0 0 No -45 0.54 No 33 65.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41194738 - NM_007294 BRCA1 0 . . . 6.74 74.84 22 4.67 No 35 0.92 Yes 0 0 No -21 0.92 Yes 47 38.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47712224 + NM_000251 MSH2 0 . . . 0.83 80.33 26 5 No 12 0.14 No 0 0 No -25 0.84 Yes 46 75.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41014089 + NM_001164269 RAD51 0 . . . 0.19 74.08 21 5.2 No 74 0.33 No 0 0 No -20 0.55 No 63 39.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56811797 + NM_058216 RAD51C 0 . . . 10.06 90.69 29 4.34 No 44 0.29 No 0 0 No -28 0.7 Yes 40 80.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68930124 + NM_133509 RAD51B 0 . . . 4.36 73.24 22 5.19 No 70 1.03 Yes 0 0 No -21 0.94 Yes 45 91.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32943265 + NM_000059 BRCA2 0 . . . 5.1 72.78 32 6.35 Yes 70 0.94 Yes 0 0 No -35 0.5 No 50 51.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68701207 + NM_133509 RAD51B 0 . . . 1.36 57.96 25 5.39 No 70 0.15 No 0 0 No -22 0.73 Yes 58 30.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94211430 - NM_005591 MRE11 0 . . . 2.19 73.71 49 8.93 Yes 73 -5.56 No 0 0 No -19 0.58 No 48 69.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68295167 + NM_133509 RAD51B 0 . . . 6.27 72.31 31 7.94 Yes 20 0.13 No 0 0 No -30 0.72 Yes 38 63.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89729497 + NM_000314 PTEN 0 . . . 3.9 88.42 26 6.93 Yes 43 0.65 No 0 0 No -25 0.87 Yes 51 96.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68561878 + NM_133509 RAD51B 0 . . . 0.57 77.05 18 4.9 No 17 -2.77 No 0 0 No -23 0.59 No 47 82.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190699500 + NM_000534 PMS1 0 . . . 2.93 84.79 20 6.32 Yes 2 1.51 Yes 0 0 No -24 0.47 No 14 88.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47752300 + NM_000251 MSH2 0 . . . 1.55 66.52 36 6.24 Yes 31 -2.31 No 0 0 No -35 0.49 No 56 38.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47681284 + NM_000251 MSH2 0 . . . 0.51 63.59 29 6.32 Yes 22 0.5 No 0 0 No -28 0.77 Yes 36 79.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89663397 + NM_000314 PTEN 0 . . . 2.23 73.58 54 6.46 Yes 76 0.84 Yes 0 0 No -41 0.47 No 49 59.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37070873 + NM_000249 MLH1 0 . . . 6.95 85.19 77 9.8 Yes 5 2.24 Yes 0 0 No -23 0.31 No 39 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68985943 + NM_133509 RAD51B 0 . . . 0.56 0 23 4.53 No 51 -1.73 No 0 0 No -37 0.33 No 50 70.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41205823 - NM_007294 BRCA1 0 . . . 3.69 85.02 32 6.08 Yes 3 0.99 Yes 0 0 No -24 0.31 No 50 50.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69144524 + NM_133509 RAD51B 0 . . . 2.69 76.91 43 6.13 Yes 64 -4.94 No 0 0 No -19 0.5 No 50 88.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108142318 + NM_000051 ATM 0 . . . 7 86.36 22 4.38 No 66 1.14 Yes 0 0 No -21 0.91 Yes 44 61.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94194755 - NM_005591 MRE11 0 . . . 4.38 70.9 25 5.57 Yes 54 1.18 Yes 0 0 No -27 0.62 No 54 32.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68819421 + NM_004360 CDH1 0 . . . 4.08 82.59 23 4.83 No 18 1.29 Yes 0 0 No -22 0.69 Yes 40 67.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215588682 - NM_000465 BARD1 0 . . . 2.21 69.8 24 4.99 No 57 -4.28 No 0 0 No -41 0.75 Yes 39 49.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131977129 + NM_005732 RAD50 0 . . . 0.97 0 21 4.89 No 65 -3.97 No 0 0 No -20 0.63 No 48 56.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215591619 - NM_000465 BARD1 0 . . . 0.14 72.62 9 3.43 No 68 0.44 No 0 0 No -58 0.69 Yes 25 70.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68428222 + NM_133509 RAD51B 0 . . . 4.29 78 17 6.16 Yes 16 1.96 Yes 0 0 No -24 0.11 No 42 94.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90968923 - NM_002485 NBN 0 . . . 1.09 0 17 8.18 Yes 64 1.27 Yes 0 0 No -16 0.77 Yes 43 81.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68973095 + NM_133509 RAD51B 0 . . . 4.53 78.75 24 4.72 No 12 0.16 No 0 0 No -23 0.62 No 46 70.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89726392 + NM_000314 PTEN 0 . . . 4.78 72.28 21 5 No 32 1.09 Yes 0 0 No -20 0.5 No 50 86.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84400455 - NM_139076 FAM175A 0 . . . 3.41 82.26 22 6.4 Yes 34 1.13 Yes 0 0 No -21 0.91 Yes 49 61.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47763491 + NM_000251 MSH2 0 . . . 7.68 83 32 6.48 Yes 32 1.96 Yes 0 0 No -31 0.79 Yes 46 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59905953 - NM_032043 BRIP1 0 . . . 6.11 80.35 27 5.09 No 46 1.29 Yes 0 0 No -26 0.84 Yes 43 75.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68463084 + NM_133509 RAD51B 0 . . . 0.69 73.28 28 5.66 Yes 45 -4.66 No 0 0 No -46 0.7 Yes 56 36.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41248821 - NM_007294 BRCA1 0 . . . 4.07 75.66 23 5.37 No 52 -3.93 No 0 0 No -20 0.38 No 39 85.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68788286 + NM_004360 CDH1 0 . . . 5.55 81.84 22 5 No 8 1.54 Yes 0 0 No -21 0.8 Yes 50 62.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52443153 - NM_004656 BAP1 0 . . . 3.65 64.86 34 5.79 Yes 52 1.36 Yes 0 0 No -19 0.79 Yes 40 63.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108207315 + NM_000051 ATM 0 . . . 7 86.43 29 5.74 Yes 68 0.72 No 0 0 No -28 0.81 Yes 43 96.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94173418 - NM_005591 MRE11 0 . . . 0.76 0 23 5.39 No 74 1.4 Yes 0 0 No -22 0.8 Yes 50 66.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32925331 + NM_000059 BRCA2 0 . . . 5.97 76.87 25 5.2 No -3 0.86 Yes 0 0 No -45 0.59 No 41 59.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32918493 + NM_000059 BRCA2 0 . . . 0.9 69.45 12 5.22 No 17 -1.81 No 0 0 No -22 0.32 No 52 68.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6011714 - NM_000535 PMS2 0 . . . 5.39 74.26 44 6.44 Yes 10 1.06 Yes 0 0 No -27 0.48 No 48 73.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68882235 + NM_133509 RAD51B 0 . . . 8.34 80.94 121 10.71 Yes 9 0.91 Yes 0 0 No -38 0.57 No 49 71.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69048502 + NM_133509 RAD51B 0 . . . 1.63 59.98 16 4.85 No -2 0.99 Yes 0 0 No -20 0.88 Yes 60 28.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94158327 - NM_005591 MRE11 0 . . . 4.89 77.7 31 5.51 No 31 -1.98 No 0 0 No -13 0.42 No 42 33.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89720150 + NM_000314 PTEN 0 . . . 5.85 80.07 18 5.73 Yes 6 1.15 Yes 0 0 No -24 0.52 No 44 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68648294 + NM_133509 RAD51B 0 . . . 4.49 81.3 23 5.38 No 4 1.05 Yes 0 0 No -22 0.66 No 33 70.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108112521 + NM_000051 ATM 0 . . . 4.02 84 19 4.8 No 2 1.51 Yes 0 0 No -22 0.66 No 12 16.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59790855 - NM_032043 BRIP1 0 . . . 0.8 0 29 3.52 No 2 0.28 No 0 0 No -25 0.45 No 56 44.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68843103 + NM_004360 CDH1 0 . . . 0.12 66.26 14 5.1 No 47 -1.59 No 0 0 No -25 0.53 No 39 30.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68951193 + NM_133509 RAD51B 0 . . . 4.09 84.22 51 6.9 Yes 8 1.14 Yes 0 0 No -33 0.84 Yes 50 80.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32932152 + NM_000059 BRCA2 0 . . . 2.78 55.91 13 4.67 No 28 1.68 Yes 0 0 No -21 0.48 No 30 88.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68838448 + NM_133509 RAD51B 0 . . . 4.3 69.79 39 6.99 Yes 50 0.39 No 0 0 No -23 0.59 No 43 92.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190662605 + NM_000534 PMS1 0 . . . 8.4 86.04 30 5.65 Yes 52 1.29 Yes 0 0 No -29 0.64 No 44 63.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105206143 + NM_021930 RINT1 0 . . . 5.58 83.42 11 4.9 No 41 -4.62 No 0 0 No -20 0.83 Yes 45 48.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6011659 - NM_000535 PMS2 0 . . . 4.51 84.41 23 5.25 No 65 1.07 Yes 0 0 No -22 0.29 No 38 48.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190729002 + NM_000534 PMS1 0 . . . 2.57 72.89 21 5.37 No 28 0.33 No 0 0 No -26 0.64 No 45 52.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68658513 + NM_133509 RAD51B 0 . . . 0.67 69.11 28 5.75 Yes 68 0.14 No 0 0 No -27 0.73 Yes 49 40.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23622612 - NM_024675 PALB2 0 . . . 1.03 67.51 58 8.9 Yes 50 1.09 Yes 0 0 No -51 0.6 No 52 42.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108139568 + NM_000051 ATM 0 . . . 7.08 90.08 49 8.27 Yes 66 -4.4 No 0 0 No -24 0.47 No 51 82.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68914056 + NM_133509 RAD51B 0 . . . 0.34 71.6 19 6.14 Yes 65 -3.63 No 0 0 No -26 0.71 Yes 43 60.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75503362 - NM_001040108 MLH3 0 . . . 2.32 74.89 12 4.24 No 69 -3.02 No 0 0 No -33 0.34 No 51 65.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23650729 - NM_024675 PALB2 0 . . . 3.94 0 14 5.2 No 18 0.07 No 0 0 No -20 0.33 No 40 62.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68682927 + NM_133509 RAD51B 0 . . . 1.02 77.94 53 9.54 Yes 4 0 No 0 0 No -52 0.86 Yes 54 65.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47716514 + NM_000251 MSH2 0 . . . 0.69 68.75 36 6.06 Yes 23 1.23 Yes 0 0 No -26 0.7 Yes 35 77.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89632065 + NM_000314 PTEN 0 . . . 6.43 79.3 9 5.04 No 10 0.87 Yes 0 0 No -22 0.87 Yes 48 77.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21989509 - NM_000077 CDKN2A 0 . . . 0.31 75.55 16 4.68 No 57 0.89 Yes 0 0 No -21 0.47 No 49 52.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41003162 + NM_001164269 RAD51 0 . . . 4.98 77.51 23 4.23 No 58 -2.06 No 0 0 No -22 0.71 Yes 38 60.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32950630 + NM_000059 BRCA2 0 . . . 4.43 78.42 15 4.12 No 59 -3.94 No 0 0 No -25 0.65 No 52 69.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105174841 + NM_021930 RINT1 0 . . . 2.69 65.02 20 5.1 No 8 0.63 No 0 0 No -26 0.52 No 40 96.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94228509 - NM_005591 MRE11 0 . . . 6.24 80.15 14 3.47 No 17 0.97 Yes 0 0 No -23 0.41 No 45 60.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68729283 + NM_133509 RAD51B 0 . . . 5.47 71.13 20 4.88 No 6 1 Yes 0 0 No -44 0.41 No 35 88.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47639474 + NM_000251 MSH2 0 . . . 5.79 77.34 15 3.62 No 6 0.37 No 0 0 No -24 0.47 No 43 66.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56809183 + NM_058216 RAD51C 0 . . . 0.37 72.05 36 6.74 Yes 67 0.18 No 0 0 No -35 0.42 No 53 59.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90987901 - NM_002485 NBN 0 . . . 7.12 86.44 11 4.58 No 67 1.29 Yes 0 0 No -18 0.34 No 43 90.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89644353 + NM_000314 PTEN 0 . . . 3.56 71.65 36 8.92 Yes 20 -3.53 No 0 0 No -28 0.36 No 44 59.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59908087 - NM_032043 BRIP1 0 . . . 5.83 73.18 20 5.1 No 17 0.71 No 0 0 No -27 0.57 No 41 66.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94164569 - NM_005591 MRE11 0 . . . 1.01 58.32 29 5.39 No 45 -2.46 No 0 0 No -22 0.57 No 44 86.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7580562 - NM_000546 TP53 0 . . . 6.81 86.81 17 5.02 No 7 0.76 No 0 0 No -24 0.81 Yes 51 58.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68754863 + NM_133509 RAD51B 0 . . . 3.63 59.53 70 6.15 Yes 11 0.6 No 0 0 No -25 0.34 No 47 65.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104179725 - NM_001100119 XRCC3 0 . . . 7.89 80.35 32 5.83 Yes 7 0.87 Yes 0 0 No -31 0.67 Yes 51 85.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108147778 + NM_000051 ATM 0 . . . 8.06 86.97 24 5.1 No 13 1.59 Yes 0 0 No -23 0.8 Yes 45 91.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68654454 + NM_133509 RAD51B 0 . . . 1.35 77.14 20 6.04 Yes 18 0.6 No 0 0 No -25 0.72 Yes 40 90.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190664124 + NM_000534 PMS1 0 . . . 1.01 71.06 12 3.82 No 29 0.83 Yes 0 0 No -25 0.93 Yes 29 74.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68389109 + NM_133509 RAD51B 0 . . . 5.84 69.09 19 4.88 No 0 1.1 Yes 0 0 No -26 0.76 Yes 58 63.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32927932 + NM_000059 BRCA2 0 . . . 0.1 65.72 17 4.77 No 76 -5.05 No 0 0 No -46 0.6 No 43 34.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29102608 - NM_001005735 CHEK2 0 . . . 8.04 82.35 25 6.3 Yes 76 1.57 Yes 0 0 No -24 0.65 No 36 72.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29126946 - NM_001005735 CHEK2 0 . . . 4.21 72.94 39 6.39 Yes 23 0.48 No 0 0 No -38 0.96 Yes 40 79.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108211268 + NM_000051 ATM 0 . . . 2.32 0 34 5.8 Yes 58 0.67 No 0 0 No -33 0.82 Yes 43 62.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6035726 - NM_000535 PMS2 0 . . . 1.45 66.49 20 4.58 No -4 0.4 No 0 0 No -19 0.6 No 34 28.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90972632 - NM_002485 NBN 0 . . . 5.46 71.62 17 5.23 No 47 1.39 Yes 0 0 No -23 0.49 No 40 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131956168 + NM_005732 RAD50 0 . . . 3.94 72.11 26 6.08 Yes 44 0.52 No 0 0 No -25 0.87 Yes 18 75.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68865628 + NM_004360 CDH1 0 . . . 3.61 0 31 5.83 Yes 75 0.13 No 0 0 No -30 0.91 Yes 48 68.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89686049 + NM_000314 PTEN 0 . . . 5.35 73.49 33 5.61 Yes 25 0.86 Yes 0 0 No -32 0.78 Yes 33 61.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40987192 + NM_001164269 RAD51 0 . . . 0.96 62.11 18 5.57 Yes 10 0.53 No 0 0 No -26 0.89 Yes 48 39.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68398583 + NM_133509 RAD51B 0 . . . 1.51 83.95 13 4.36 No 40 0.22 No 0 0 No -41 0.56 No 47 86.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59763329 - NM_032043 BRIP1 0 . . . 0.97 74.89 16 4.69 No 5 1.38 Yes 0 0 No -44 0.94 Yes 43 45.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69069581 + NM_133509 RAD51B 0 . . . 1.79 74.08 17 5.2 No 10 0.53 No 0 0 No -16 0.58 No 36 41.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29124627 - NM_001005735 CHEK2 0 . . . 4.89 81.57 28 5.79 Yes 30 -1.96 No 0 0 No -22 0.41 No 44 66.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68529262 + NM_133509 RAD51B 0 . . . 0.32 74.68 15 4.58 No 4 0.1 No 0 0 No -14 0.33 No 54 84.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69028762 + NM_133509 RAD51B 0 . . . 5.48 0 12 3.64 No 3 1 Yes 0 0 No -48 0.39 No 41 72.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68891282 + NM_133509 RAD51B 0 . . . 1.48 66.95 37 5.11 No 50 1.08 Yes 0 0 No -25 0.56 No 51 78.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37050456 + NM_000249 MLH1 0 . . . 3.04 67.43 14 5.65 Yes -1 0.96 Yes 0 0 No -25 0.5 No 50 86.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190714198 + NM_000534 PMS1 0 . . . 5.68 84.22 52 7.05 Yes 33 1.38 Yes 0 0 No -32 0.59 No 44 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59905643 - NM_032043 BRIP1 0 . . . 2.79 86.91 24 6.62 Yes 29 0.35 No 0 0 No -23 0.46 No 36 68.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68817015 + NM_133509 RAD51B 0 . . . 7.96 86.08 27 5.47 No -2 1.58 Yes 0 0 No -26 0.91 Yes 45 78.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37072962 + NM_000249 MLH1 0 . . . 5.22 69.94 28 5.92 Yes 37 0.68 No 0 0 No -20 0.39 No 40 76.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108145358 + NM_000051 ATM 0 . . . 2.47 73.71 19 4.86 No 22 0.97 Yes 0 0 No -30 0.4 No 40 80.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32964235 + NM_000059 BRCA2 0 . . . 5.46 76.04 23 5.19 No 23 0.61 No 0 0 No -28 0.61 No 35 50.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68926550 + NM_133509 RAD51B 0 . . . 10.48 91.25 15 5.03 No 74 0.88 Yes 0 0 No -24 0.63 No 53 50.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41222953 - NM_007294 BRCA1 0 . . . 3.86 74.4 19 4.37 No 70 -5.04 No 0 0 No -18 0.86 Yes 30 52.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68801124 + NM_004360 CDH1 0 . . . 1.54 0 20 5.1 No 22 0.97 Yes 0 0 No -25 0.44 No 36 80 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69146577 + NM_133509 RAD51B 0 . . . 3.52 64.22 31 5.48 No 13 1.34 Yes 0 0 No -30 0.69 Yes 44 84.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68812744 + NM_004360 CDH1 0 . . . 8.2 70.03 19 4.69 No 16 0.09 No 0 0 No -18 0.65 No 43 58.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47766862 + NM_000251 MSH2 0 . . . 1.45 68.74 31 6.08 Yes 68 -3.94 No 0 0 No -30 0.4 No 50 21.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68407746 + NM_133509 RAD51B 0 . . . 0.23 69.2 30 5.25 No 74 0.04 No 0 0 No -33 0.63 No 44 44.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89708881 + NM_000314 PTEN 0 . . . 2.01 70 125 8.18 Yes 73 0.07 No 0 0 No -27 0.44 No 51 73.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47656741 + NM_000251 MSH2 0 . . . 0.89 80.49 33 5.73 Yes 27 0.78 Yes 0 0 No -32 0.64 No 52 40.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68817595 + NM_133509 RAD51B 0 . . . 0.17 0 47 7.28 Yes 11 0.96 Yes 0 0 No -46 0.63 No 38 89.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21978758 - NM_000077 CDKN2A 0 . . . 7.39 72.37 22 5.29 No 27 1.81 Yes 0 0 No -21 0.72 Yes 31 85.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6031034 - NM_000535 PMS2 0 . . . 4.33 82.49 16 5.04 No 3 0.6 No 0 0 No -20 0.45 No 43 68.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41203343 - NM_007294 BRCA1 0 . . . 0.44 69.69 46 5.58 Yes 64 0.32 No 0 0 No -39 0.79 Yes 45 28.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84405898 - NM_139076 FAM175A 0 . . . 5.32 74.24 24 4.47 No 69 0.81 Yes 0 0 No -23 0.93 Yes 39 83.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59912637 - NM_032043 BRIP1 0 . . . 3.14 67.91 23 4.83 No 15 1.24 Yes 0 0 No -48 0.49 No 42 50.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59804345 - NM_032043 BRIP1 0 . . . 4.89 83.67 14 5.48 No 35 1.59 Yes 0 0 No -42 0.5 No 43 97.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56773545 + NM_058216 RAD51C 0 . . . 1.01 77.71 26 6.09 Yes 4 0.87 Yes 0 0 No -25 0.66 No 54 74.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59779496 - NM_032043 BRIP1 0 . . . 3.66 62.18 23 5.72 Yes 69 -5.8 No 0 0 No -22 0.66 No 50 31.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75513489 - NM_001040108 MLH3 0 . . . 1.34 72.63 21 4.58 No 25 0.39 No 0 0 No -20 0.94 Yes 50 32.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68388109 + NM_133509 RAD51B 0 . . . 0.1 71.09 14 4 No 69 0.79 Yes 0 0 No -26 0.83 Yes 33 34.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69127928 + NM_133509 RAD51B 0 . . . 4.05 75.02 23 5.39 No 13 0.65 No 0 0 No -47 0.79 Yes 45 89.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23628600 - NM_024675 PALB2 0 . . . 5.11 72.36 27 4.94 No 69 0.86 Yes 0 0 No -42 0.41 No 38 89.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59792394 - NM_032043 BRIP1 0 . . . 2.24 80.12 30 5.82 Yes 7 1.02 Yes 0 0 No -30 0.67 Yes 51 82.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190681211 + NM_000534 PMS1 0 . . . 8.71 73.25 14 6.4 Yes 67 0.63 No 0 0 No -34 0.71 Yes 42 44.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21993012 - NM_000077 CDKN2A 0 . . . 3.55 73.88 28 5.38 No 62 0.91 Yes 0 0 No -27 0.83 Yes 46 86.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68867745 + NM_133509 RAD51B 0 . . . 6.57 93.96 25 5.86 Yes 17 0.89 Yes 0 0 No -24 0.79 Yes 41 82.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68799209 + NM_004360 CDH1 0 . . . 0.6 83.94 23 5.59 Yes 33 1.13 Yes 0 0 No -22 0.37 No 25 60.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215604231 - NM_000465 BARD1 0 . . . 1.99 0 22 4.9 No 12 1.14 Yes 0 0 No -22 0.6 No 46 49.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68629176 + NM_133509 RAD51B 0 . . . 4.64 74.1 20 6.19 Yes 46 1.01 Yes 0 0 No -19 0.36 No 45 87.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21988275 - NM_000077 CDKN2A 0 . . . 2.97 73.07 25 6.24 Yes 49 0.73 No 0 0 No -24 0.49 No 42 75.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56802090 + NM_058216 RAD51C 0 . . . 5.64 72.91 22 5.2 No 27 0.23 No 0 0 No -21 0.59 No 44 51.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59813493 - NM_032043 BRIP1 0 . . . 2.13 67.46 52 5.89 Yes 36 1.39 Yes 0 0 No -29 0.7 Yes 22 89.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69141594 + NM_133509 RAD51B 0 . . . 3.56 77.37 37 5.14 No 67 0.71 No 0 0 No -24 0.32 No 47 50.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59873360 - NM_032043 BRIP1 0 . . . 1.5 68.97 23 7.13 Yes 45 -3.13 No 0 0 No -30 0.3 No 55 30.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68710073 + NM_133509 RAD51B 0 . . . 5.51 73.58 22 5.29 No 16 0.77 No 0 0 No -22 0.51 No 42 44.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89725392 + NM_000314 PTEN 0 . . . 8.73 84.74 14 3.97 No 19 1.82 Yes 0 0 No -26 0.56 No 39 90.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108192760 + NM_000051 ATM 0 . . . 1.49 0 24 6.06 Yes 28 1.2 Yes 0 0 No -23 0.66 No 51 72.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68435663 + NM_133509 RAD51B 0 . . . 3.23 75.03 20 5.1 No 49 -3.52 No 0 0 No -22 0.53 No 57 24.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69022687 + NM_133509 RAD51B 0 . . . 4.15 79.64 20 4.58 No 45 0.89 Yes 0 0 No -19 0.95 Yes 39 58.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69036536 + NM_133509 RAD51B 0 . . . 2.54 74.59 20 5.1 No 38 0.73 No 0 0 No -48 0.35 No 39 79.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41202986 - NM_007294 BRCA1 0 . . . 3.36 72.63 27 5.39 No 20 -2.95 No 0 0 No -26 0.79 Yes 40 50.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108135042 + NM_000051 ATM 0 . . . 0.82 74.91 66 7.81 Yes 18 0.05 No 0 0 No -33 0.58 No 43 46.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41002013 + NM_001164269 RAD51 0 . . . 3.7 65.99 11 5.57 Yes 19 0.95 Yes 0 0 No -30 0.49 No 39 66.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68441060 + NM_133509 RAD51B 0 . . . 0.13 63.61 33 5.82 Yes 47 0.45 No 0 0 No -19 0.51 No 42 61.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68436508 + NM_133509 RAD51B 0 . . . 1.63 72.89 16 4.97 No 45 0.56 No 0 0 No -28 0.42 No 46 81.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190725677 + NM_000534 PMS1 0 . . . 4.57 0 26 5.52 No 31 0.71 No 0 0 No -30 0.68 Yes 33 80.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68483060 + NM_133509 RAD51B 0 . . . 1.87 69.04 23 4.66 No 35 0.15 No 0 0 No -22 0.85 Yes 43 54.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47664873 + NM_000251 MSH2 0 . . . 4.29 84 33 6.07 Yes 2 0.76 No 0 0 No -32 0.67 Yes 19 90.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68395003 + NM_133509 RAD51B 0 . . . 6.64 70.1 26 5.27 No 67 0.92 Yes 0 0 No -28 0.5 No 40 68.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108207597 + NM_000051 ATM 0 . . . 1.29 0 25 4 No 32 1.17 Yes 0 0 No -22 0.59 No 36 59.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68905719 + NM_133509 RAD51B 0 . . . 6.57 91.07 19 5.75 Yes 68 0.63 No 0 0 No -24 0.34 No 50 65.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32940710 + NM_000059 BRCA2 0 . . . 0.68 74.02 13 5.48 No 4 0.15 No 0 0 No -23 0.66 No 54 83.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37076662 + NM_000249 MLH1 0 . . . 4.16 84.4 22 6.27 Yes 47 -1.08 No 0 0 No -29 0.39 No 50 75.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32942340 + NM_000059 BRCA2 0 . . . 5.12 85.02 20 7.36 Yes 6 1.26 Yes 0 0 No -19 0.65 No 52 78.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94195993 - NM_005591 MRE11 0 . . . 5.46 0 17 4.45 No 29 1.57 Yes 0 0 No -23 0.49 No 29 73.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68567253 + NM_133509 RAD51B 0 . . . 2.86 60.11 29 6.78 Yes 15 0.79 Yes 0 0 No -28 0.94 Yes 43 80.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190733768 + NM_000534 PMS1 0 . . . 2.44 74.65 37 4.05 No 5 1.39 Yes 0 0 No -27 0.46 No 39 79.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59874679 - NM_032043 BRIP1 0 . . . 9.64 82.92 28 5.63 Yes 16 1.47 Yes 0 0 No -28 0.71 Yes 42 57.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47696118 + NM_000251 MSH2 0 . . . 2.47 82.31 20 4.93 No 45 1.11 Yes 0 0 No -29 0.69 Yes 38 81.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68304020 + NM_133509 RAD51B 0 . . . 3.45 0 36 6.28 Yes 33 0.8 Yes 0 0 No -30 0.63 No 40 80.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68867075 + NM_133509 RAD51B 0 . . . 6.65 0 17 5.56 Yes 36 0.63 No 0 0 No -24 0.67 Yes 33 62.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190713573 + NM_000534 PMS1 0 . . . 1.77 77.37 24 4.79 No 20 0.43 No 0 0 No -23 0.91 Yes 38 57.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105172108 + NM_021930 RINT1 0 . . . 1.53 67.57 14 4 No 65 -2.97 No 0 0 No -28 0.52 No 42 63.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29102176 - NM_001005735 CHEK2 0 . . . 0.42 0 36 5.84 Yes 20 -0.16 No 0 0 No -25 0.57 No 13 30.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68921522 + NM_133509 RAD51B 0 . . . 3.59 80.57 29 5.56 Yes 27 1.02 Yes 0 0 No -28 0.79 Yes 31 58.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89644751 + NM_000314 PTEN 0 . . . 5.55 79.13 21 4.58 No 47 0.53 No 0 0 No -54 0.51 No 50 53.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40999829 + NM_001164269 RAD51 0 . . . 4.18 84.33 18 4.36 No 23 0.45 No 0 0 No -35 0.64 No 48 52.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68406381 + NM_133509 RAD51B 0 . . . 6.99 89.69 19 3.61 No 9 0.53 No 0 0 No -22 0.62 No 44 69.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68843846 + NM_004360 CDH1 0 . . . 9.38 85.91 30 4.63 No 20 0 No 0 0 No -29 0.45 No 48 87.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32968520 + NM_000059 BRCA2 0 . . . 8.38 82.38 16 4.69 No 10 0.05 No 0 0 No -20 0.76 Yes 49 66.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89720942 + NM_000314 PTEN 0 . . . 9.26 81.32 18 4.9 No 6 0.76 No 0 0 No -25 0.44 No 37 71.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47667718 + NM_000251 MSH2 0 . . . 0.07 80.48 32 3.98 No 35 1.7 Yes 0 0 No -23 0.4 No 23 57.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90990679 - NM_002485 NBN 0 . . . 5.05 74.38 55 7.42 Yes 38 0.89 Yes 0 0 No -54 0.91 Yes 42 63.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68616756 + NM_133509 RAD51B 0 . . . 5.99 86.2 16 4.04 No 9 0.98 Yes 0 0 No -29 0.49 No 49 89.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105197777 + NM_021930 RINT1 0 . . . 1.89 60.31 28 5.57 Yes 64 -5.97 No 0 0 No -25 0.67 Yes 45 25.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47754677 + NM_000251 MSH2 0 . . . 2.74 0 22 3.96 No 31 1.22 Yes 0 0 No -21 0.5 No 45 86.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68847836 + NM_133509 RAD51B 0 . . . 6.65 66.77 12 4.8 No 47 0.98 Yes 0 0 No -19 0.38 No 33 55.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69018230 + NM_133509 RAD51B 0 . . . 2.21 69.29 21 4.58 No 70 0.95 Yes 0 0 No -20 0.59 No 18 87.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108152875 + NM_000051 ATM 0 . . . 3.97 84.41 28 5.57 Yes 9 1.44 Yes 0 0 No -27 0.78 Yes 49 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68992497 + NM_133509 RAD51B 0 . . . 10.3 89.68 15 5.56 Yes 61 0.68 No 0 0 No -30 0.48 No 49 60.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68602545 + NM_133509 RAD51B 0 . . . 0.76 76.14 42 6.38 Yes 15 0.61 No 0 0 No -27 0.66 No 43 89.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75505826 - NM_001040108 MLH3 0 . . . 0.09 74.68 27 6.16 Yes 45 0.97 Yes 0 0 No -26 0.89 Yes 54 73.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68498748 + NM_133509 RAD51B 0 . . . 2.02 78.3 14 4.47 No 52 1.53 Yes 0 0 No -39 0.7 Yes 47 56.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1227303 + NM_000455 STK11 0 . . . 4.92 80.45 34 6.42 Yes 8 0.98 Yes 0 0 No -33 0.55 No 50 72.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69124341 + NM_133509 RAD51B 0 . . . 2.27 84.34 94 7.6 Yes 48 0.86 Yes 0 0 No -55 0.49 No 54 35.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32961252 + NM_000059 BRCA2 0 . . . 5.8 73.93 23 4.9 No 64 1.81 Yes 0 0 No -25 0.72 Yes 39 76.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59910239 - NM_032043 BRIP1 0 . . . 1.75 71.64 15 6.7 Yes 32 1.87 Yes 0 0 No -33 0.37 No 51 62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41258235 - NM_007294 BRCA1 0 . . . 2.88 69.92 28 5.14 No 27 0.87 Yes 0 0 No -26 0.69 Yes 31 77.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215645796 - NM_000465 BARD1 0 . . . 0.73 81.03 34 6.47 Yes 28 -2.76 No 0 0 No -33 0.56 No 47 75.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108101745 + NM_000051 ATM 0 . . . 5.65 78.67 25 5.25 No 76 1.62 Yes 0 0 No -24 0.81 Yes 45 53.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68926504 + NM_133509 RAD51B 0 . . . 1.82 77.4 23 4.8 No 43 1.45 Yes 0 0 No -20 0.77 Yes 30 67.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94175964 - NM_005591 MRE11 0 . . . 1.02 63.42 16 4.69 No 17 0.63 No 0 0 No -23 0.82 Yes 41 80.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29084768 - NM_001005735 CHEK2 0 . . . 5.76 81.23 38 6.18 Yes 18 0.59 No 0 0 No -37 0.83 Yes 40 67.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104169934 - NM_001100119 XRCC3 0 . . . 5.66 78.01 26 4.56 No 47 -1.59 No 0 0 No -21 0.57 No 53 40.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32890281 + NM_000059 BRCA2 0 . . . 3.66 76.1 9 5.14 No 12 1.71 Yes 0 0 No -32 0.27 No 46 92.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68748501 + NM_133509 RAD51B 0 . . . 3.35 79.69 31 3.9 No 69 -5.57 No 0 0 No -23 0.82 Yes 49 45.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89689558 + NM_000314 PTEN 0 . . . 5.76 74.82 23 6.07 Yes 69 0.35 No 0 0 No -22 0.9 Yes 40 73.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108182214 + NM_000051 ATM 0 . . . 0.54 83.3 21 5 No 76 -5.59 No 0 0 No -18 0.52 No 50 37.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152351556 - NM_005431 XRCC2 0 . . . 3.86 78.92 28 6.16 Yes 44 1.32 Yes 0 0 No -27 0.45 No 41 52.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108130880 + NM_000051 ATM 0 . . . 0.05 84.22 20 4.9 No 33 1.11 Yes 0 0 No -24 0.62 No 50 75.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94180696 - NM_005591 MRE11 0 . . . 7.77 83.82 39 5.64 Yes 66 0.83 Yes 0 0 No -22 0.72 Yes 48 90.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108201779 + NM_000051 ATM 0 . . . 4.19 72.72 21 5.04 No 26 -2.37 No 0 0 No -20 0.47 No 48 46.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108227234 + NM_000051 ATM 0 . . . 3.92 84.31 22 5.74 Yes 10 0.36 No 0 0 No -21 0.82 Yes 43 52.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59823923 - NM_032043 BRIP1 0 . . . 6.22 73.61 41 5.17 No 48 1.53 Yes 0 0 No -31 0.46 No 21 61.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68479628 + NM_133509 RAD51B 0 . . . 5.31 83.6 23 4.88 No 16 0.58 No 0 0 No -23 0.64 No 41 55.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68623028 + NM_133509 RAD51B 0 . . . 1.35 79.54 14 3.76 No 60 -2.43 No 0 0 No -42 0.73 Yes 45 54.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89698790 + NM_000314 PTEN 0 . . . 2.34 68.44 20 5.74 Yes 29 0.75 No 0 0 No -20 0.68 Yes 46 54.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69134191 + NM_133509 RAD51B 0 . . . 5.5 79.65 30 5.59 Yes 26 1.23 Yes 0 0 No -29 0.78 Yes 42 54.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68845083 + NM_133509 RAD51B 0 . . . 2.4 72.17 19 4.46 No -3 0.09 No 0 0 No -18 0.82 Yes 51 79.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68789139 + NM_133509 RAD51B 0 . . . 7.62 77.93 23 6.85 Yes 73 1.7 Yes 0 0 No -22 0.92 Yes 32 68.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68419690 + NM_133509 RAD51B 0 . . . 2.69 65.69 41 4.72 No 37 0.75 No 0 0 No -40 0.43 No 44 45.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68810577 + NM_004360 CDH1 0 . . . 0.21 61.6 19 4.34 No 60 0.84 Yes 0 0 No -30 0.74 Yes 41 37.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68594944 + NM_133509 RAD51B 0 . . . 5.12 81.77 16 6.72 Yes 61 -3.36 No 0 0 No -31 0.63 No 47 75.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89700826 + NM_000314 PTEN 0 . . . 3.62 85.55 87 7.01 Yes 7 0.86 Yes 0 0 No -45 0.39 No 41 44.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7576440 - NM_000546 TP53 0 . . . 0.3 84.41 21 5.04 No 23 0.25 No 0 0 No -20 0.53 No 35 83.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68727762 + NM_133509 RAD51B 0 . . . 6.54 70.41 30 4.69 No 53 2.08 Yes 0 0 No -23 0.69 Yes 47 76.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40990322 + NM_001164269 RAD51 0 . . . 6.48 72.45 14 4.47 No 24 1.88 Yes 0 0 No -21 0.43 No 34 70.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68900308 + NM_133509 RAD51B 0 . . . 4.74 73.66 16 5.04 No 67 1.93 Yes 0 0 No -20 0.59 No 40 73.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131964746 + NM_005732 RAD50 0 . . . 6.69 82.42 16 5 No -4 1.03 Yes 0 0 No -21 0.51 No 51 79.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68858928 + NM_133509 RAD51B 0 . . . 0.1 76.76 27 5.39 No 26 0.03 No 0 0 No -26 0.63 No 28 66.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56804444 + NM_058216 RAD51C 0 . . . 2.89 68.34 36 4.97 No 21 1.72 Yes 0 0 No -26 0.79 Yes 37 77.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215610518 - NM_000465 BARD1 0 . . . 1.77 79.26 27 5.35 No 59 -3.07 No 0 0 No -26 0.7 Yes 48 96.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47652089 + NM_000251 MSH2 0 . . . 1.49 0 17 5.29 No 3 0.31 No 0 0 No -25 0.38 No 41 32.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68668231 + NM_133509 RAD51B 0 . . . 3.94 74.99 21 4.78 No 64 0.74 No 0 0 No -24 0.75 Yes 51 72.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108175950 + NM_000051 ATM 0 . . . 0.11 0 18 4.9 No 50 0.17 No 0 0 No -26 0.29 No 51 23.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1225387 + NM_000455 STK11 0 . . . 0.56 78.63 21 6.41 Yes 30 1.11 Yes 0 0 No -26 0.9 Yes 28 68.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6044245 - NM_000535 PMS2 0 . . . 2.11 84.22 23 5.12 No 33 1.13 Yes 0 0 No -50 0.47 No 50 63.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68301962 + NM_133509 RAD51B 0 . . . 5.62 81.86 51 7.36 Yes -4 0.59 No 0 0 No -39 0.49 No 41 40.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59850964 - NM_032043 BRIP1 0 . . . 3.61 66.17 35 7.52 Yes 1 0.06 No 0 0 No -34 0.57 No 48 69.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152368471 - NM_005431 XRCC2 0 . . . 3.56 85.9 45 5.7 Yes 48 0.64 No 0 0 No -27 0.72 Yes 15 64.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33433583 - NM_002878 RAD51D 0 . . . 6.45 86.95 28 5.8 Yes 39 1.03 Yes 0 0 No -27 0.89 Yes 50 49.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131901413 + NM_005732 RAD50 0 . . . 7.14 75.35 28 3.86 No 0 1.63 Yes 0 0 No -27 0.37 No 45 60.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59853009 - NM_032043 BRIP1 0 . . . 9.01 81.71 15 5.29 No 59 1 Yes 0 0 No -25 0.83 Yes 42 51.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68485051 + NM_133509 RAD51B 0 . . . 7.27 82.29 64 8.59 Yes 16 0.93 Yes 0 0 No -20 0.61 No 42 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32891430 + NM_000059 BRCA2 0 . . . 4.29 69.37 15 4.53 No 43 0.27 No 0 0 No -23 0.56 No 40 94.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59906736 - NM_032043 BRIP1 0 . . . 0.96 68.47 28 5.22 No 74 0.35 No 0 0 No -22 0.57 No 51 48.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68849694 + NM_004360 CDH1 0 . . . 6.83 74.86 27 5.66 Yes -4 0.79 Yes 0 0 No -22 0.51 No 47 63.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94173285 - NM_005591 MRE11 0 . . . 6.88 81.97 15 4.8 No 19 0.07 No 0 0 No -26 0.7 Yes 51 61.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68435281 + NM_133509 RAD51B 0 . . . 0.14 0 13 3.8 No 32 0.99 Yes 0 0 No -7 0.53 No 13 37.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108157667 + NM_000051 ATM 0 . . . 1.13 72.71 23 4.9 No 55 0.99 Yes 0 0 No -22 0.9 Yes 45 71.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68529171 + NM_133509 RAD51B 0 . . . 2.41 70.68 48 6.58 Yes 3 0.05 No 0 0 No -47 0.79 Yes 37 76.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59787787 - NM_032043 BRIP1 0 . . . 6.12 76.71 40 6.38 Yes 58 0.27 No 0 0 No -27 0.54 No 42 75.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75488863 - NM_001040108 MLH3 0 . . . 1.63 70.36 22 4.58 No 15 1.9 Yes 0 0 No -42 0.69 Yes 43 89.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68863125 + NM_133509 RAD51B 0 . . . 8.05 95.65 33 7.99 Yes 57 1.7 Yes 0 0 No -32 0.81 Yes 40 92.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68347713 + NM_133509 RAD51B 0 . . . 4.96 68.56 21 4.82 No 30 -2.9 No 0 0 No -20 0.68 Yes 49 59.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215648096 - NM_000465 BARD1 0 . . . 4.41 69.24 19 4.47 No 54 0.21 No 0 0 No -18 0.49 No 48 89.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59774888 - NM_032043 BRIP1 0 . . . 1.7 63.83 20 4.38 No 75 0.22 No 0 0 No -17 0.57 No 55 64.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32950544 + NM_000059 BRCA2 0 . . . 2.86 77.96 21 6.04 Yes 52 0.64 No 0 0 No -25 0.8 Yes 38 90.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89628454 + NM_000314 PTEN 0 . . . 1.97 60.53 25 6.16 Yes 38 0.02 No 0 0 No -24 0.84 Yes 31 52.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68894889 + NM_133509 RAD51B 0 . . . 0.98 70.59 32 5.28 No 63 0.57 No 0 0 No -31 0.69 Yes 42 42.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215606094 - NM_000465 BARD1 0 . . . 5.11 83.14 19 4.19 No 34 2.23 Yes 0 0 No -25 0.51 No 50 62.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108229770 + NM_000051 ATM 0 . . . 5.9 85.4 16 5.34 No 76 -7.12 No 0 0 No -22 0.8 Yes 51 80.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6010073 - NM_000535 PMS2 0 . . . 7.3 68.59 16 4.69 No 54 -1.61 No 0 0 No -15 0.46 No 40 49.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84403612 - NM_139076 FAM175A 0 . . . 1.51 0 21 7.21 Yes 34 0.47 No 0 0 No -20 0.85 Yes 24 63.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108199075 + NM_000051 ATM 0 . . . 3.37 68.95 37 5.8 Yes 16 1.11 Yes 0 0 No -26 0.57 No 42 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89719940 + NM_000314 PTEN 0 . . . 5.12 74.48 21 6.17 Yes 60 -3.59 No 0 0 No -24 0.43 No 39 69.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47675409 + NM_000251 MSH2 0 . . . 5.95 79.14 15 4.46 No 70 0.87 Yes 0 0 No -48 0.52 No 45 54.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68381280 + NM_133509 RAD51B 0 . . . 1.4 72.74 28 5.38 No 70 1.33 Yes 0 0 No -27 0.7 Yes 26 41.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68779765 + NM_004360 CDH1 0 . . . 4.71 84.17 23 6.16 Yes 46 0.97 Yes 0 0 No -22 0.82 Yes 28 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68935112 + NM_133509 RAD51B 0 . . . 3.02 69.59 60 7.97 Yes 1 0.78 Yes 0 0 No -25 0.62 No 46 70.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68900821 + NM_133509 RAD51B 0 . . . 4.69 73.62 29 5.54 No 4 1.22 Yes 0 0 No -28 0.51 No 33 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47709953 + NM_000251 MSH2 0 . . . 0.19 0 21 4.89 No 48 0.69 No 0 0 No -29 0.68 Yes 53 49.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23640342 - NM_024675 PALB2 0 . . . 0.22 76.58 19 3.61 No 8 0.56 No 0 0 No -23 0.46 No 50 90.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68469689 + NM_133509 RAD51B 0 . . . 2.05 72.83 14 4.47 No -2 1.06 Yes 0 0 No -45 0.41 No 50 59.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52436051 - NM_004656 BAP1 0 . . . 4.4 0 37 5.49 No 57 -3.88 No 0 0 No -22 0.88 Yes 56 60.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1226283 + NM_000455 STK11 0 . . . 3.8 72.55 16 4.69 No 10 -0.64 No 0 0 No -21 0.79 Yes 48 91.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68660605 + NM_133509 RAD51B 0 . . . 2.79 73.83 20 4.96 No 55 0.93 Yes 0 0 No -25 0.54 No 48 71.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37045024 + NM_000249 MLH1 0 . . . 3.21 85.02 50 6.46 Yes 66 0.85 Yes 0 0 No -32 0.38 No 49 65.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32932308 + NM_000059 BRCA2 0 . . . 1.68 69.2 21 5.48 No 39 0.33 No 0 0 No -20 0.75 Yes 52 75.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190652038 + NM_000534 PMS1 0 . . . 1.87 66.49 31 5.57 Yes 21 -2.88 No 0 0 No -30 0.73 Yes 55 58.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68619977 + NM_133509 RAD51B 0 . . . 6.07 77 16 4.69 No 13 0.2 No 0 0 No -39 0.18 No 44 63.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32933597 + NM_000059 BRCA2 0 . . . 7.64 85.14 29 5.38 No 5 1.24 Yes 0 0 No -28 0.93 Yes 50 60.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68935382 + NM_133509 RAD51B 0 . . . 0.92 73.03 23 5.72 Yes 74 -1.93 No 0 0 No -29 0.27 No 49 60.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108172639 + NM_000051 ATM 0 . . . 2.88 73.44 26 5.09 No 9 1.68 Yes 0 0 No -50 0.6 No 49 80.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59929794 - NM_032043 BRIP1 0 . . . 0.67 76.33 91 7.82 Yes 19 2.03 Yes 0 0 No -27 0.78 Yes 39 81.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68908917 + NM_133509 RAD51B 0 . . . 5.64 80.99 19 4.69 No 10 1.43 Yes 0 0 No -18 0.78 Yes 47 66.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75507364 - NM_001040108 MLH3 0 . . . 6.86 78.66 31 4.81 No 28 0.65 No 0 0 No -24 0.77 Yes 41 94.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59774320 - NM_032043 BRIP1 0 . . . 3.67 87.11 14 5.07 No 54 0.32 No 0 0 No -14 0.36 No 44 58.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21987387 - NM_000077 CDKN2A 0 . . . 5.76 71.06 21 5.64 Yes 64 0.48 No 0 0 No -26 0.35 No 24 5.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68297648 + NM_133509 RAD51B 0 . . . 6.05 90.14 14 5.27 No 30 0.84 Yes 0 0 No -31 0.35 No 19 67.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190725473 + NM_000534 PMS1 0 . . . 1.25 68.28 38 8.18 Yes 61 0.5 No 0 0 No -37 0.78 Yes 47 73.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59854499 - NM_032043 BRIP1 0 . . . 7.43 77.54 37 7.39 Yes 12 0.34 No 0 0 No -36 0.69 Yes 38 90.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190701093 + NM_000534 PMS1 0 . . . 3.55 79.37 29 6.31 Yes 58 0.5 No 0 0 No -28 0.72 Yes 55 47.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59923541 - NM_032043 BRIP1 0 . . . 1 83.24 41 5.28 No 1 0.42 No 0 0 No -33 0.62 No 47 31.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68765671 + NM_133509 RAD51B 0 . . . 0.89 58.76 17 5.06 No 35 -1.36 No 0 0 No -25 0.57 No 33 47.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68896280 + NM_133509 RAD51B 0 . . . 2.52 74.94 31 4.94 No 41 0.89 Yes 0 0 No -30 0.41 No 48 86.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69056811 + NM_133509 RAD51B 0 . . . 3.11 0 25 5.2 No 11 0.8 Yes 0 0 No -24 0.71 Yes 41 78.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23624772 - NM_024675 PALB2 0 . . . 1.89 75.18 20 5.05 No 33 1.16 Yes 0 0 No -19 0.66 No 25 48.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41253807 - NM_007294 BRCA1 0 . . . 0.08 52.32 17 6.32 Yes 63 0.59 No 0 0 No -30 0.71 Yes 40 66.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41210450 - NM_007294 BRCA1 0 . . . 3.13 74.48 36 6.66 Yes 21 0.59 No 0 0 No -35 0.72 Yes 42 66.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68461479 + NM_133509 RAD51B 0 . . . 4.55 77.21 28 5.34 No 2 1.09 Yes 0 0 No -27 0.43 No 33 69.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59807462 - NM_032043 BRIP1 0 . . . 0.52 69.44 17 6.08 Yes 53 -2.48 No 0 0 No -16 0.58 No 48 78.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68975550 + NM_133509 RAD51B 0 . . . 6.38 75.04 20 7.88 Yes 46 0.39 No 0 0 No -32 0.42 No 46 55.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47717467 + NM_000251 MSH2 0 . . . 2.3 84.41 30 5.13 No 24 1.76 Yes 0 0 No -25 0.64 No 34 64.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21981741 - NM_000077 CDKN2A 0 . . . 3.43 76.71 27 5.19 No 66 0.09 No 0 0 No -26 0.32 No 50 66.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190691484 + NM_000534 PMS1 0 . . . 8.11 85.28 20 5.1 No 17 0.99 Yes 0 0 No -19 0.37 No 41 67.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68713927 + NM_133509 RAD51B 0 . . . 6.67 83.1 28 5.74 Yes 37 0.49 No 0 0 No -34 0.57 No 43 88.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131899976 + NM_005732 RAD50 0 . . . 1.46 64.07 32 5.65 Yes 14 0.34 No 0 0 No -35 0.92 Yes 44 47.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59847882 - NM_032043 BRIP1 0 . . . 4.37 73.56 24 5.48 No 1 0.48 No 0 0 No -23 0.84 Yes 34 90.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41272231 - NM_007294 BRCA1 0 . . . 1.73 61.24 34 6.73 Yes 45 0.82 Yes 0 0 No -33 0.82 Yes 48 62.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68993574 + NM_133509 RAD51B 0 . . . 0.15 0 25 4.84 No 75 1.26 Yes 0 0 No -24 0.74 Yes 54 28.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108094851 + NM_000051 ATM 0 . . . 4.26 73.77 26 3.87 No 37 1.82 Yes 0 0 No -26 0.45 No 46 31.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68788321 + NM_133509 RAD51B 0 . . . 6.59 84.08 14 5.4 No 11 0.95 Yes 0 0 No -22 0.59 No 44 61.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68851530 + NM_004360 CDH1 0 . . . 4.89 74.25 24 5.16 No 45 -4.25 No 0 0 No -26 0.59 No 44 47.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69070638 + NM_133509 RAD51B 0 . . . 5.98 85.07 18 3.51 No 11 1.4 Yes 0 0 No -22 0.53 No 47 88.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94154530 - NM_005591 MRE11 0 . . . 4.34 86.22 32 6.41 Yes 5 0.13 No 0 0 No -31 0.71 Yes 47 27.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41229281 - NM_007294 BRCA1 0 . . . 5.78 73.32 15 5.02 No 54 0.93 Yes 0 0 No -26 0.8 Yes 38 87.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59804205 - NM_032043 BRIP1 0 . . . 6.66 77.35 11 5.83 Yes 6 0.54 No 0 0 No -32 0.7 Yes 38 53.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52435985 - NM_004656 BAP1 0 . . . 5.69 86.3 34 5.74 Yes -3 -0.88 No 0 0 No -47 0.46 No 47 62.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59922267 - NM_032043 BRIP1 0 . . . 0.45 61.78 35 6.4 Yes 38 0.78 Yes 0 0 No -34 0.8 Yes 20 76.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23631819 - NM_024675 PALB2 0 . . . 8.01 88.27 21 5.2 No 44 -1.74 No 0 0 No -20 0.83 Yes 52 61.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59886156 - NM_032043 BRIP1 0 . . . 4.87 79.34 31 4.62 No 4 1.32 Yes 23 0.74 Yes -26 0.74 Yes 54 40.37 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68366249 + NM_133509 RAD51B 0 . . . 0.09 63.42 17 4.8 No 65 -2.79 No 0 0 No -21 0.28 No 32 70.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32942481 + NM_000059 BRCA2 0 . . . 6.49 80.98 16 4.29 No 74 0.88 Yes 0 0 No -60 0.22 No 54 76.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215602467 - NM_000465 BARD1 0 . . . 0.43 0 12 4 No 34 0.97 Yes 0 0 No -31 0.42 No 49 45.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131970789 + NM_005732 RAD50 0 . . . 1.5 63.87 22 5.09 No 26 0.91 Yes 0 0 No -21 0.6 No 42 39.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59856788 - NM_032043 BRIP1 0 . . . 2.19 76.25 24 5.48 No 19 -1.86 No 0 0 No -23 0.45 No 42 53.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48014169 + NM_000179 MSH6 0 . . . 0.9 0 23 5 No 47 0.61 No 0 0 No -22 0.91 Yes 11 55.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59772357 - NM_032043 BRIP1 0 . . . 5.79 85.58 25 4.26 No 60 -3.2 No 0 0 No -24 0.86 Yes 46 94.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68533759 + NM_133509 RAD51B 0 . . . 1.28 74.01 49 7.78 Yes 19 0.5 No 0 0 No -48 0.66 No 39 69.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68774457 + NM_133509 RAD51B 0 . . . 0.18 67.41 16 4.86 No 71 0.61 No 0 0 No -27 0.55 No 49 35.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215592745 - NM_000465 BARD1 0 . . . 1.19 58.46 18 5.55 No 28 1.21 Yes 0 0 No -34 0.48 No 30 87.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190676291 + NM_000534 PMS1 0 . . . 3.78 66.33 26 4.97 No 66 -5.37 No 0 0 No -29 0.42 No 48 45.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47649317 + NM_000251 MSH2 0 . . . 5.83 87.72 24 6.24 Yes 18 0.15 No 0 0 No -23 0.53 No 37 58.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108178445 + NM_000051 ATM 0 . . . 4.92 79.93 30 4.77 No 0 1.32 Yes 0 0 No -29 0.95 Yes 45 80.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89639177 + NM_000314 PTEN 0 . . . 6.14 88.68 45 7.47 Yes 9 0.62 No 0 0 No -44 0.58 No 49 92.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59830132 - NM_032043 BRIP1 0 . . . 10.98 90.96 16 4.21 No 6 1.1 Yes 0 0 No -55 0.5 No 44 46.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41246706 - NM_007294 BRCA1 0 . . . 0.64 70.91 41 6.78 Yes 30 -2.83 No 0 0 No -31 0.62 No 42 33.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84404938 - NM_139076 FAM175A 0 . . . 4.37 83.14 15 5.16 No 15 0.11 No 0 0 No -22 0.58 No 49 87.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47680666 + NM_000251 MSH2 0 . . . 2.47 76.34 28 5.83 Yes 53 1.19 Yes 0 0 No -31 0.76 Yes 46 36.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47745476 + NM_000251 MSH2 0 . . . 5.19 72.09 15 5.14 No 30 -0.49 No 0 0 No -25 0.87 Yes 28 50.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89629492 + NM_000314 PTEN 0 . . . 2.13 61.95 44 9.02 Yes 29 1.64 Yes 0 0 No -25 0.52 No 29 96.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190731245 + NM_000534 PMS1 0 . . . 0.37 66.26 31 4.57 No 50 0.55 No 0 0 No -48 0.71 Yes 49 39.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68432903 + NM_133509 RAD51B 0 . . . 7.39 78.26 27 5.87 Yes 32 1.08 Yes 0 0 No -26 0.84 Yes 43 72.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68818212 + NM_004360 CDH1 0 . . . 9.04 85.18 33 4.34 No 65 1.35 Yes 0 0 No -27 0.72 Yes 47 84.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48012770 + NM_000179 MSH6 0 . . . 2.82 73.39 36 6.08 Yes 29 0.64 No 0 0 No -35 0.53 No 46 54.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645397 - NM_024675 PALB2 0 . . . 1.25 72.53 34 5.22 No 31 -1.55 No 0 0 No -33 0.6 No 45 72.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68298816 + NM_133509 RAD51B 0 . . . 5.27 75.84 15 4.58 No 61 0.75 No 0 0 No -35 0.32 No 52 40.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59861843 - NM_032043 BRIP1 0 . . . 0.93 69.12 27 5.1 No 39 0.2 No 0 0 No -26 0.88 Yes 31 61.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59833107 - NM_032043 BRIP1 0 . . . 5.8 85.28 21 5.43 No 18 1.36 Yes 0 0 No -21 0.83 Yes 40 68.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190680788 + NM_000534 PMS1 0 . . . 0.95 76.28 22 4.48 No 48 0.21 No 0 0 No -29 0.22 No 49 80.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68506285 + NM_133509 RAD51B 0 . . . 1.49 78.24 16 5.12 No -3 0.14 No 0 0 No -20 0.35 No 45 73.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59876394 - NM_032043 BRIP1 0 . . . 2.72 81.93 19 5 No 16 -2.67 No 0 0 No -18 0.77 Yes 44 64.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47637082 + NM_000251 MSH2 0 . . . 2.31 72.85 50 7.48 Yes 58 -3.66 No 0 0 No -49 0.38 No 48 73.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68345830 + NM_133509 RAD51B 0 . . . 1.78 75.35 15 5.35 No 50 -4.96 No 0 0 No -46 0.31 No 51 54.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69066219 + NM_133509 RAD51B 0 . . . 0.68 69.69 14 4.89 No -4 1.03 Yes 0 0 No -22 0.74 Yes 52 34.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90977667 - NM_002485 NBN 0 . . . 1.8 71.66 25 5.1 No 56 -2.16 No 0 0 No -24 0.89 Yes 42 56.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131975186 + NM_005732 RAD50 0 . . . 3.38 72.25 15 5.72 Yes 39 -3.32 No 0 0 No -28 0.34 No 47 58.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215637953 - NM_000465 BARD1 0 . . . 3.47 70.07 16 4.61 No 34 0.98 Yes 0 0 No -41 0.24 No 42 45.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108166779 + NM_000051 ATM 0 . . . 1.29 0 17 4.24 No 65 1.04 Yes 0 0 No -25 0.48 No 45 78.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190667398 + NM_000534 PMS1 0 . . . 6.32 83.96 33 5.83 Yes 6 0.93 Yes 0 0 No -32 0.39 No 52 58.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131952375 + NM_005732 RAD50 0 . . . 6.56 72.84 36 5.99 Yes -2 0.53 No 0 0 No -25 0.57 No 36 46.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47697455 + NM_000251 MSH2 0 . . . 7.26 81.15 16 5.52 No 66 1.54 Yes 0 0 No -30 0.57 No 39 87.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68753412 + NM_133509 RAD51B 0 . . . 6.38 68.61 28 5.39 No 42 1.1 Yes 0 0 No -27 0.92 Yes 45 38.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33435035 - NM_002878 RAD51D 0 . . . 4.47 77.14 28 5.76 Yes 8 1.51 Yes 0 0 No -31 0.87 Yes 54 81.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94207541 - NM_005591 MRE11 0 . . . 8.53 84.04 24 6.33 Yes 66 0.74 No 0 0 No -23 0.92 Yes 30 70.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190731897 + NM_000534 PMS1 0 . . . 2.96 72.9 33 6.85 Yes 42 0.55 No 0 0 No -32 0.8 Yes 47 82.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59789885 - NM_032043 BRIP1 0 . . . 1.22 66.95 16 4.84 No 35 0.39 No 0 0 No -19 0.73 Yes 48 52.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68558701 + NM_133509 RAD51B 0 . . . 7.41 94.98 28 6.03 Yes 25 0.05 No 0 0 No -27 0.75 Yes 33 77.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215588581 - NM_000465 BARD1 0 . . . 3 86.04 9 3.87 No 67 -3.96 No 0 0 No -27 0.67 Yes 40 67.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23639378 - NM_024675 PALB2 0 . . . 2.78 80.12 20 4.01 No 7 1.36 Yes 0 0 No -20 0.92 Yes 51 82.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69080959 + NM_133509 RAD51B 0 . . . 0.39 0 23 4.8 No 31 0.19 No 0 0 No -22 0.34 No 59 51.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68466099 + NM_133509 RAD51B 0 . . . 2.64 65.98 18 4.12 No 40 1.1 Yes 0 0 No -23 0.32 No 56 49.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68693921 + NM_133509 RAD51B 0 . . . 1.71 76.38 13 4.12 No 10 0.49 No 0 0 No -21 0.44 No 44 51.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68960590 + NM_133509 RAD51B 0 . . . 7.67 85.52 44 7.41 Yes 17 0.3 No 0 0 No -43 0.92 Yes 41 91.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68814325 + NM_004360 CDH1 0 . . . 5.65 81.96 18 5.89 Yes 35 1.1 Yes 0 0 No -21 0.38 No 48 80.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23652762 - NM_024675 PALB2 0 . . . 9.92 89.71 21 4.98 No 32 -1.15 No 0 0 No -26 0.35 No 39 48.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89696150 + NM_000314 PTEN 0 . . . 6.28 93.58 19 4.9 No 19 1.79 Yes 0 0 No -23 0.53 No 39 82.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190734738 + NM_000534 PMS1 0 . . . 4.7 72.42 27 5.39 No 1 1.48 Yes 0 0 No -52 0.22 No 45 82.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89671701 + NM_000314 PTEN 0 . . . 7.6 88.63 33 5.1 No 32 0.6 No 0 0 No -33 0.77 Yes 40 94.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68328384 + NM_133509 RAD51B 0 . . . 2.09 69.95 64 8.21 Yes 8 2.38 Yes 0 0 No -19 0.62 No 50 52.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131903783 + NM_005732 RAD50 0 . . . 2.69 84.41 24 4.86 No 4 0.21 No 0 0 No -24 0.62 No 43 61.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68314756 + NM_133509 RAD51B 0 . . . 5.07 77.94 64 8.99 Yes 32 0.35 No 0 0 No -31 0.85 Yes 45 78.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69032331 + NM_133509 RAD51B 0 . . . 1 80.53 19 5 No 56 -3.97 No 0 0 No -22 0.78 Yes 51 60 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1220349 + NM_000455 STK11 0 . . . 0.22 76.91 29 7.35 Yes 76 1.13 Yes 24 0.63 Yes -28 0.93 Yes 45 41.1 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68844542 + NM_133509 RAD51B 0 . . . 2.52 81.09 27 4.76 No 52 1.17 Yes 0 0 No -19 0.58 No 42 72.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68662377 + NM_133509 RAD51B 0 . . . 0.65 74.23 9 5.2 No 45 0.42 No 0 0 No -20 0.56 No 54 80.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6027813 - NM_000535 PMS2 0 . . . 4.59 88.01 23 7.09 Yes 44 -3.74 No 0 0 No -33 0.44 No 50 67.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32899424 + NM_000059 BRCA2 0 . . . 0.17 69.84 28 5.38 No 2 1.32 Yes 0 0 No -31 0.31 No 44 76.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68791110 + NM_004360 CDH1 0 . . . 4.22 85.87 14 4.24 No 33 0.99 Yes 0 0 No -25 0.29 No 50 54.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59852831 - NM_032043 BRIP1 0 . . . 13.49 96.87 37 5.87 Yes 37 0.69 No 0 0 No -28 0.37 No 38 53.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47756655 + NM_000251 MSH2 0 . . . 3.67 68.38 76 8.75 Yes 17 1.28 Yes 0 0 No -28 0.72 Yes 41 80.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68618771 + NM_133509 RAD51B 0 . . . 3.1 83 56 7.57 Yes 33 1.24 Yes 0 0 No -31 0.92 Yes 25 51.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47642620 + NM_000251 MSH2 0 . . . 3.97 84.41 29 5.29 No 20 1.4 Yes 0 0 No -26 0.36 No 38 66.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47663946 + NM_000251 MSH2 0 . . . 8.31 80.44 24 9.55 Yes 20 1.1 Yes 0 0 No -23 0.8 Yes 38 83.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215658809 - NM_000465 BARD1 0 . . . 3.19 0 25 5.08 No 8 1.05 Yes 0 0 No -51 0.42 No 50 93.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37052972 + NM_000249 MLH1 0 . . . 3.27 80.22 29 7.35 Yes 58 -3.88 No 0 0 No -28 0.9 Yes 48 80.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47638318 + NM_000251 MSH2 0 . . . 1.56 70.42 11 5.2 No 41 -3.58 No 0 0 No -25 0.48 No 55 54.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68541829 + NM_133509 RAD51B 0 . . . 0.74 0 42 8.61 Yes 14 0.64 No 0 0 No -41 0.69 Yes 44 63.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131917145 + NM_005732 RAD50 0 . . . 4.95 80.44 30 4.36 No 4 1.04 Yes 0 0 No -34 0.41 No 48 91.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69077442 + NM_133509 RAD51B 0 . . . 4 82.84 20 4.87 No 36 -1.04 No 0 0 No -22 0.49 No 49 76.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59818991 - NM_032043 BRIP1 0 . . . 0.32 70.19 28 5.57 Yes 73 0.21 No 0 0 No -27 0.6 No 44 71.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1225450 + NM_000455 STK11 0 . . . 1.71 79.6 26 5.03 No 4 1.06 Yes 0 0 No -19 0.65 No 43 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68664047 + NM_133509 RAD51B 0 . . . 8.32 83.05 38 5.62 Yes 23 1.49 Yes 0 0 No -26 0.6 No 51 62.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89649570 + NM_000314 PTEN 0 . . . 6.27 76.91 21 4.53 No 5 0.37 No 0 0 No -20 0.61 No 35 75.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105177158 + NM_021930 RINT1 0 . . . 0.35 66.42 10 4 No 72 1.21 Yes 0 0 No -25 0.67 Yes 47 30.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68396882 + NM_133509 RAD51B 0 . . . 2.51 77.27 13 4.29 No 50 0.03 No 0 0 No -30 0.57 No 49 70.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41276580 - NM_007294 BRCA1 0 . . . 1.04 77.34 19 4.69 No 43 -3.62 No 0 0 No -57 0.66 No 53 72.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108131912 + NM_000051 ATM 0 . . . 3.57 74.54 25 4.93 No 31 0.06 No 0 0 No -28 0.67 Yes 49 37.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59760465 - NM_032043 BRIP1 0 . . . 2.8 82.06 24 6 Yes 52 0.33 No 0 0 No -23 0.91 Yes 15 56.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152357951 - NM_005431 XRCC2 0 . . . 3.02 74.9 28 5.38 No 75 0.55 No 0 0 No -27 0.51 No 51 65.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68523189 + NM_133509 RAD51B 0 . . . 3.65 69.42 25 5.25 No 73 0.77 Yes 0 0 No -24 0.64 No 48 91.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68478480 + NM_133509 RAD51B 0 . . . 2.89 72.43 34 5.71 Yes 58 1.4 Yes 0 0 No -26 0.8 Yes 49 78.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68864406 + NM_133509 RAD51B 0 . . . 8.45 75.26 32 6.08 Yes 42 0.73 No 0 0 No -31 0.46 No 47 58.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32888483 + NM_000059 BRCA2 0 . . . 5.9 80.64 21 4.98 No 59 -2.6 No 0 0 No -20 0.71 Yes 46 49.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68931915 + NM_133509 RAD51B 0 . . . 1.85 80.39 19 5.83 Yes 46 1.04 Yes 0 0 No -27 0.76 Yes 33 54.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68495185 + NM_133509 RAD51B 0 . . . 7.64 80.66 33 5.68 Yes -2 0.71 No 0 0 No -32 0.53 No 51 56.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108217178 + NM_000051 ATM 0 . . . 1.49 58.01 22 8.06 Yes 44 1.03 Yes 0 0 No -21 0.9 Yes 51 57.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59788289 - NM_032043 BRIP1 0 . . . 1.07 64.46 38 7.21 Yes 45 1.34 Yes 0 0 No -29 0.61 No 38 37.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69149160 + NM_133509 RAD51B 0 . . . 0.47 66.04 17 6.26 Yes 58 -4.73 No 0 0 No -16 0.67 Yes 20 48.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68699433 + NM_133509 RAD51B 0 . . . 6.18 79.13 22 3.12 No 74 -4.56 No 0 0 No -21 0.67 Yes 39 89.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37051649 + NM_000249 MLH1 0 . . . 3.01 0 17 5.2 No 31 0.58 No 0 0 No -25 0.45 No 27 88.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68396420 + NM_133509 RAD51B 0 . . . 1.08 75.95 18 4.9 No 70 1.82 Yes 0 0 No -7 0.32 No 43 65.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131961221 + NM_005732 RAD50 0 . . . 1.71 72.26 35 6.04 Yes 11 0.31 No 0 0 No -34 0.74 Yes 47 51.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68597759 + NM_133509 RAD51B 0 . . . 4.58 66.17 15 5.28 No 47 0.31 No 0 0 No -26 0.28 No 42 68.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108122602 + NM_000051 ATM 0 . . . 2.13 67.08 23 5.04 No -4 1.41 Yes 0 0 No -17 0.35 No 37 49.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47763541 + NM_000251 MSH2 0 . . . 6.31 84.82 15 4.36 No 62 1.35 Yes 0 0 No -26 0.68 Yes 42 77.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68433590 + NM_133509 RAD51B 0 . . . 3.73 0 15 4.99 No 27 0.05 No 0 0 No -40 0.6 No 50 82.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32918163 + NM_000059 BRCA2 0 . . . 4.72 78.29 43 5.71 Yes -2 1.11 Yes 0 0 No -29 0.53 No 47 58.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90946957 - NM_002485 NBN 0 . . . 0.55 66.78 16 4.41 No 17 0.67 No 0 0 No -21 0.94 Yes 37 50.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69020853 + NM_133509 RAD51B 0 . . . 0.19 0 26 4.22 No 59 0.78 Yes 0 0 No -23 0.43 No 59 35.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68914932 + NM_133509 RAD51B 0 . . . 0.7 65.61 12 5.39 No 54 -4.15 No 0 0 No -28 0.29 No 54 45.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68795004 + NM_004360 CDH1 0 . . . 10.23 94.42 16 6.86 Yes 59 1.04 Yes 0 0 No -29 0.35 No 45 27.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56779566 + NM_058216 RAD51C 0 . . . 3.66 84.4 36 7.07 Yes 32 1.24 Yes 0 0 No -27 0.39 No 22 72.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68563541 + NM_133509 RAD51B 0 . . . 7.68 74.7 24 6.97 Yes 9 0.21 No 0 0 No -31 0.68 Yes 45 52.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68863905 + NM_004360 CDH1 0 . . . 5.41 90.92 17 7.46 Yes 74 1.78 Yes 0 0 No -21 0.53 No 43 17.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59815820 - NM_032043 BRIP1 0 . . . 1.94 67.47 17 4.58 No 61 0.56 No 0 0 No -25 0.56 No 43 84.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32894743 + NM_000059 BRCA2 0 . . . 0.3 69.68 15 3.59 No 61 0.61 No 0 0 No -31 0.49 No 41 83.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68496041 + NM_133509 RAD51B 0 . . . 3.27 61.34 19 4.8 No 32 0.36 No 0 0 No -52 0.66 No 26 78.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68954864 + NM_133509 RAD51B 0 . . . 2.08 71.43 36 5.16 No 65 -5.08 No 0 0 No -21 0.35 No 49 47.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90967371 - NM_002485 NBN 0 . . . 9.92 87.88 34 4.96 No 5 1.61 Yes 0 0 No -33 0.81 Yes 44 82.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47787677 + NM_000251 MSH2 0 . . . 0 71.35 24 4.97 No 70 1.19 Yes 0 0 No -23 0.64 No 34 56.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32974713 + NM_000059 BRCA2 0 . . . 3.65 73.26 27 5.66 Yes 61 1.32 Yes 0 0 No -26 0.84 Yes 44 91.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84380630 - NM_139076 FAM175A 0 . . . 10.13 85.17 11 3.82 No 12 0.97 Yes 0 0 No -19 0.54 No 35 77.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68830711 + NM_133509 RAD51B 0 . . . 3.67 67.85 32 5.62 Yes 68 -3.73 No 0 0 No -29 0.5 No 43 85.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94171793 - NM_005591 MRE11 0 . . . 8.69 90.3 21 6.52 Yes 4 1.34 Yes 0 0 No -20 0.36 No 42 75.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59840244 - NM_032043 BRIP1 0 . . . 6.51 76.34 26 5 No 75 0.84 Yes 0 0 No -25 0.88 Yes 56 53.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68998905 + NM_133509 RAD51B 0 . . . 3 71.34 26 5.48 No 41 1.25 Yes 0 0 No -28 0.36 No 46 86.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94209130 - NM_005591 MRE11 0 . . . 6.6 74.97 17 6.27 Yes 16 1.87 Yes 0 0 No -24 0.48 No 42 81.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68657555 + NM_133509 RAD51B 0 . . . 2.2 74.94 57 6.86 Yes 37 0.75 No 0 0 No -44 0.51 No 44 81.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21980344 - NM_000077 CDKN2A 0 . . . 10.73 86.47 25 6.33 Yes 12 1.09 Yes 0 0 No -24 0.74 Yes 46 87.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23633139 - NM_024675 PALB2 0 . . . 7.73 0 14 5.16 No 38 0.62 No 0 0 No -20 0.81 Yes 43 64.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59844260 - NM_032043 BRIP1 0 . . . 2.29 80.21 13 4.87 No 6 1.14 Yes 0 0 No -17 0.7 Yes 52 59.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69068755 + NM_133509 RAD51B 0 . . . 3.22 64.74 16 6.37 Yes 74 0.44 No 0 0 No -34 0.38 No 39 78.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47759545 + NM_000251 MSH2 0 . . . 5.7 84.17 10 4.8 No 70 1.31 Yes 0 0 No -31 0.48 No 44 56.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1212751 + NM_000455 STK11 0 . . . 2.2 72.26 32 5.08 No 34 1.26 Yes 0 0 No -26 0.46 No 24 91.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108128900 + NM_000051 ATM 0 . . . 2.63 85.91 12 3.19 No 19 0.96 Yes 0 0 No -22 0.5 No 45 92.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69020721 + NM_133509 RAD51B 0 . . . 2.92 76.15 27 6.29 Yes 35 0.98 Yes 0 0 No -30 0.84 Yes 47 42.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104180897 - NM_001100119 XRCC3 0 . . . 3.71 79.05 23 4.23 No 58 0.47 No 0 0 No -53 0.57 No 54 63.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59931631 - NM_032043 BRIP1 0 . . . 1.95 0 19 5.04 No 55 0.48 No 0 0 No -27 0.79 Yes 40 85.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32952280 + NM_000059 BRCA2 0 . . . 1.82 63.22 24 5.29 No 70 0.48 No 0 0 No -23 0.91 Yes 39 44.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68780823 + NM_004360 CDH1 0 . . . 4.44 72.85 19 4.76 No 45 -3.5 No 0 0 No -19 0.46 No 43 43.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7563932 - NM_000546 TP53 0 . . . 2.99 80.36 44 8.19 Yes 36 1.24 Yes 0 0 No -23 0.45 No 22 70.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108146160 + NM_000051 ATM 0 . . . 3.89 75.64 14 5.17 No 9 1.9 Yes 0 0 No -20 0.47 No 49 87.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21973510 - NM_000077 CDKN2A 0 . . . 1.36 78.17 21 4.92 No 66 -6.15 No 0 0 No -20 0.75 Yes 47 52.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32918075 + NM_000059 BRCA2 0 . . . 1.33 68.09 26 6.01 Yes 57 0.31 No 0 0 No -25 0.74 Yes 36 94.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75490410 - NM_001040108 MLH3 0 . . . 1.99 82.41 31 5.99 Yes 47 0.31 No 0 0 No -30 0.32 No 41 70.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69082732 + NM_133509 RAD51B 0 . . . 6.82 76.38 16 5.94 Yes 40 1.7 Yes 0 0 No -32 0.6 No 18 73.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47735020 + NM_000251 MSH2 0 . . . 1.16 75.57 39 6.22 Yes 50 0.64 No 0 0 No -30 0.29 No 10 15.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23615842 - NM_024675 PALB2 0 . . . 3.42 70.85 19 5.64 Yes 13 0.84 Yes 0 0 No -25 0.86 Yes 45 81.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68865175 + NM_004360 CDH1 0 . . . 6.4 79.63 18 4.69 No 1 0.4 No 0 0 No -17 0.7 Yes 31 58.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69054748 + NM_133509 RAD51B 0 . . . 1.3 72.41 35 5.32 No 68 -4.75 No 0 0 No -24 0.36 No 53 37.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849157 - NM_032043 BRIP1 0 . . . 5.14 78.96 24 4.8 No 6 1.2 Yes 0 0 No -53 0.55 No 52 70.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89639183 + NM_000314 PTEN 0 . . . 1.97 0 21 5.74 Yes 15 0.59 No 0 0 No -20 0.76 Yes 43 90.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1208921 + NM_000455 STK11 0 . . . 0.29 67.76 24 4.76 No 59 1.7 Yes 0 0 No -21 0.3 No 51 22.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59829920 - NM_032043 BRIP1 0 . . . 0.06 0 21 5.99 Yes -4 0.5 No 0 0 No -20 0.78 Yes 62 23.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190667629 + NM_000534 PMS1 0 . . . 0.96 0 23 5.2 No 58 -3.02 No 0 0 No -22 0.6 No 52 50.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68653982 + NM_133509 RAD51B 0 . . . 3.08 0 28 3.75 No 9 0.21 No 0 0 No -20 0.73 Yes 49 93.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32953209 + NM_000059 BRCA2 0 . . . 2.58 68.21 23 5 No 68 -2.63 No 0 0 No -22 0.95 Yes 53 55.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68538884 + NM_133509 RAD51B 0 . . . 10.54 90.97 16 4.78 No 68 -3.8 No 0 0 No -28 0.56 No 41 41.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47771292 + NM_000251 MSH2 0 . . . 2.81 71.22 15 5 No 45 1.36 Yes 0 0 No -19 0.47 No 49 21.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90979020 - NM_002485 NBN 0 . . . 4.38 69.97 35 5.34 No 52 1.22 Yes 0 0 No -32 0.38 No 49 53.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68710900 + NM_133509 RAD51B 0 . . . 1.36 64.46 16 5.54 No 55 -1.19 No 0 0 No -27 0.22 No 49 36.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68352457 + NM_133509 RAD51B 0 . . . 1.2 68.33 33 7.53 Yes 31 -3.35 No 0 0 No -32 0.73 Yes 48 62.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215640693 - NM_000465 BARD1 0 . . . 1.86 78.17 28 5.48 No -3 0.14 No 0 0 No -27 0.89 Yes 49 96.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131957511 + NM_005732 RAD50 0 . . . 5.08 78.7 50 6.3 Yes 58 1.15 Yes 0 0 No -28 0.72 Yes 47 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40993038 + NM_001164269 RAD51 0 . . . 0.96 0 14 4.47 No 76 -6.17 No 0 0 No -30 0.34 No 53 40.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68803904 + NM_004360 CDH1 0 . . . 8.23 85.05 38 8.81 Yes 70 0.64 No 0 0 No -37 0.83 Yes 41 87.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94216463 - NM_005591 MRE11 0 . . . 0.06 79.91 47 6.46 Yes 13 0.86 Yes 0 0 No -20 0.66 No 45 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810197 + NM_004360 CDH1 0 . . . 1.67 0 36 6.73 Yes 67 1.14 Yes 0 0 No -26 0.82 Yes 54 40.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90954377 - NM_002485 NBN 0 . . . 5.28 79.43 21 4.39 No 67 0.07 No 0 0 No -20 0.47 No 50 67.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68484319 + NM_133509 RAD51B 0 . . . 8.36 80.79 35 6.08 Yes 6 1.1 Yes 0 0 No -34 0.73 Yes 52 78.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59897448 - NM_032043 BRIP1 0 . . . 9.51 86.73 20 4.8 No 45 1.04 Yes 0 0 No -19 0.71 Yes 42 56.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45806384 - NM_001048171 MUTYH 0 . . . 8.69 86.89 35 6.78 Yes 61 0.82 Yes 0 0 No -26 0.58 No 49 93.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21993453 - NM_000077 CDKN2A 0 . . . 3.96 68.93 21 5.08 No 50 -4.95 No 0 0 No -20 0.62 No 35 35.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32897553 + NM_000059 BRCA2 0 . . . 2.27 68.34 41 6.48 Yes 21 1.71 Yes 0 0 No -33 0.48 No 37 63.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56806128 + NM_058216 RAD51C 0 . . . 7.38 78.69 19 4.8 No -3 0.6 No 0 0 No -18 0.54 No 47 93.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29084512 - NM_001005735 CHEK2 0 . . . 4.29 71.24 23 5.83 Yes 52 0.05 No 0 0 No -22 0.97 Yes 48 80.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94224604 - NM_005591 MRE11 0 . . . 4.16 75.97 21 5.2 No -3 0.92 Yes 0 0 No -20 0.73 Yes 51 68.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190734628 + NM_000534 PMS1 0 . . . 4.52 68.27 28 3.38 No 21 1.23 Yes 0 0 No -23 0.7 Yes 37 75.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190705798 + NM_000534 PMS1 0 . . . 0.41 0 21 5.29 No 14 0.84 Yes 0 0 No -30 0.75 Yes 44 62.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69003926 + NM_133509 RAD51B 0 . . . 2.54 75.73 26 5.02 No 37 0.49 No 0 0 No -26 0.91 Yes 49 51.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68494446 + NM_133509 RAD51B 0 . . . 8.93 91.95 24 5.48 No 11 0.5 No 0 0 No -35 0.63 No 47 69.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68456645 + NM_133509 RAD51B 0 . . . 7.89 84.48 28 3.85 No 3 1.2 Yes 0 0 No -27 0.92 Yes 40 83.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131904416 + NM_005732 RAD50 0 . . . 1.77 79.15 31 6.6 Yes 3 0.41 No 0 0 No -30 0.8 Yes 48 55.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75499779 - NM_001040108 MLH3 0 . . . 5.79 78.93 14 5.2 No 57 0.92 Yes 0 0 No -20 0.32 No 40 79.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68974737 + NM_133509 RAD51B 0 . . . 1.32 65.05 20 5.1 No 56 -4.5 No 0 0 No -19 0.88 Yes 55 33.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190697310 + NM_000534 PMS1 0 . . . 1.08 84.22 19 5.82 Yes 76 1.47 Yes 0 0 No -19 0.52 No 50 46.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68547948 + NM_133509 RAD51B 0 . . . 2.3 0 26 5.48 No 37 0.24 No 0 0 No -25 0.95 Yes 54 70.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68684044 + NM_133509 RAD51B 0 . . . 1.44 0 21 5.94 Yes 37 1.26 Yes 0 0 No -20 0.81 Yes 43 30.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1209333 + NM_000455 STK11 0 . . . 0.09 74.68 30 5.49 No 60 1.11 Yes 0 0 No -26 0.55 No 54 79.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190693275 + NM_000534 PMS1 0 . . . 4.32 75.32 35 6.08 Yes 33 0.39 No 0 0 No -34 0.94 Yes 38 52.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47744620 + NM_000251 MSH2 0 . . . 2.63 72.66 52 6.93 Yes 66 -4.66 No 0 0 No -29 0.58 No 50 36.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68810028 + NM_133509 RAD51B 0 . . . 4.13 79.81 29 5.39 No 14 0.33 No 0 0 No -28 0.72 Yes 44 72.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69052538 + NM_133509 RAD51B 0 . . . 1.03 76.36 24 5.25 No 10 1.84 Yes 0 0 No -17 0.5 No 48 90.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68786288 + NM_133509 RAD51B 0 . . . 8.67 83.62 34 6.08 Yes 8 0.97 Yes 0 0 No -30 0.74 Yes 50 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47714033 + NM_000251 MSH2 0 . . . 3.33 69.37 15 4.58 No 29 1.27 Yes 0 0 No -54 0.37 No 42 38.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47711896 + NM_000251 MSH2 0 . . . 2.87 80.88 22 5 No 68 0.41 No 0 0 No -21 0.88 Yes 41 59.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215628515 - NM_000465 BARD1 0 . . . 7.23 79.92 20 5.66 Yes 13 0.92 Yes 0 0 No -19 0.61 No 45 91.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59931654 - NM_032043 BRIP1 0 . . . 5.02 81.68 19 4.8 No 32 0.48 No 0 0 No -16 0.56 No 47 75.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47757419 + NM_000251 MSH2 0 . . . 4 73.02 17 3.79 No NA NA NA 0 0 No -36 0.64 No 48 54.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89721570 + NM_000314 PTEN 0 . . . 4.08 87.13 22 6.85 Yes 17 1.85 Yes 0 0 No -21 0.96 Yes 50 49.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59769734 - NM_032043 BRIP1 0 . . . 8.75 81.67 16 5.04 No 37 1.43 Yes 0 0 No -20 0.51 No 46 53.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59908307 - NM_032043 BRIP1 0 . . . 0.64 57.91 23 4.28 No 0 0.88 Yes 0 0 No -28 0.38 No 31 55.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68804105 + NM_133509 RAD51B 0 . . . 3.26 0 18 4.45 No 6 0.56 No 0 0 No -21 0.8 Yes 43 72.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190699934 + NM_000534 PMS1 0 . . . 6.84 82.44 11 5.29 No 37 0.57 No 0 0 No -34 0.47 No 48 55.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642836 - NM_000465 BARD1 0 . . . 2.81 68.95 37 8.18 Yes 16 0.96 Yes 0 0 No -42 0.33 No 42 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131915324 + NM_005732 RAD50 0 . . . 3.76 82.21 16 3.85 No 75 0.62 No 0 0 No -18 0.47 No 44 92.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108129583 + NM_000051 ATM 0 . . . 0.6 75.78 24 5.29 No 15 0.19 No 0 0 No -23 0.54 No 49 73.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68616362 + NM_133509 RAD51B 0 . . . 1.08 76.58 16 4.25 No 75 0.04 No 0 0 No -25 0.81 Yes 20 32.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68756998 + NM_133509 RAD51B 0 . . . 0.49 74.83 14 4.36 No 75 1.98 Yes 0 0 No -38 0.91 Yes 46 59.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37072416 + NM_000249 MLH1 0 . . . 1.62 71.51 15 5.45 No 13 0.35 No 0 0 No -25 0.91 Yes 45 71.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131977476 + NM_005732 RAD50 0 . . . 9.4 93.7 22 4.53 No 29 1.1 Yes 0 0 No -23 0.6 No 46 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48006386 + NM_000179 MSH6 0 . . . 2.49 66.94 23 5.39 No 0 0.27 No 0 0 No -22 0.93 Yes 28 71.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68827642 + NM_133509 RAD51B 0 . . . 2.66 82.49 33 6.09 Yes 60 -3.2 No 0 0 No -29 0.78 Yes 50 34.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7581138 - NM_000546 TP53 0 . . . 6.3 85.15 48 7.35 Yes 4 0.11 No 0 0 No -47 0.63 No 45 59.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68665566 + NM_133509 RAD51B 0 . . . 1.83 64.36 21 5.2 No 50 1.41 Yes 0 0 No -20 0.77 Yes 40 61.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105183959 + NM_021930 RINT1 0 . . . 6.38 90.21 17 4.79 No 54 1.51 Yes 0 0 No -22 0.62 No 46 87.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105179149 + NM_021930 RINT1 0 . . . 8.89 89.91 34 7.49 Yes 60 1.16 Yes 0 0 No -33 0.68 Yes 35 66.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23638448 - NM_024675 PALB2 0 . . . 4.53 66.72 29 5.56 Yes 58 0.23 No 0 0 No -24 0.71 Yes 47 50.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68859980 + NM_133509 RAD51B 0 . . . 5.12 78.88 27 5.74 Yes 66 -4.39 No 0 0 No -26 0.67 Yes 52 71.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47769295 + NM_000251 MSH2 0 . . . 2.57 85.17 21 6.08 Yes 69 1.44 Yes 0 0 No -20 0.74 Yes 51 53.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23624645 - NM_024675 PALB2 0 . . . 5.38 86.06 49 6.88 Yes 25 1.41 Yes 0 0 No -26 0.43 No 48 46.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190743061 + NM_000534 PMS1 0 . . . 6.43 77.28 25 5.29 No 60 -2.3 No 0 0 No -21 0.51 No 42 58.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108109472 + NM_000051 ATM 0 . . . 0.33 78.64 21 5.1 No 11 1.2 Yes 0 0 No -23 0.76 Yes 46 55.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68327146 + NM_133509 RAD51B 0 . . . 0.52 54.38 21 5.17 No 51 -4.29 No 0 0 No -23 0.65 No 63 31.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37091106 + NM_000249 MLH1 0 . . . 5.87 80.16 22 5.81 Yes -1 0.56 No 0 0 No -22 0.53 No 41 71.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68805284 + NM_004360 CDH1 0 . . . 2.82 69.98 15 4.58 No 50 1.23 Yes 0 0 No -22 0.43 No 54 34.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47633329 + NM_000251 MSH2 0 . . . 4.23 78.98 19 6.63 Yes 76 0.6 No 0 0 No -18 0.57 No 44 68.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190691708 + NM_000534 PMS1 0 . . . 8.34 83.97 31 5.73 Yes 59 0.72 No 0 0 No -30 0.73 Yes 32 51.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89658037 + NM_000314 PTEN 0 . . . 5.37 77.37 12 4.69 No 46 1.38 Yes 0 0 No -15 0.32 No 46 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810216 + NM_004360 CDH1 0 . . . 0.18 73.11 25 5.28 No 76 0.77 Yes 0 0 No -25 0.87 Yes 44 82.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68378708 + NM_133509 RAD51B 0 . . . 2.67 67.61 21 4.9 No 18 0.09 No 0 0 No -20 0.71 Yes 53 79.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48028876 + NM_000179 MSH6 0 . . . 7.49 84.95 39 6.48 Yes 74 1.08 Yes 0 0 No -32 0.61 No 44 62.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48018919 + NM_000179 MSH6 0 . . . 2.85 70.78 35 6.4 Yes 59 1.47 Yes 0 0 No -37 0.39 No 47 85.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68774161 + NM_004360 CDH1 0 . . . 2.87 64.6 85 9.74 Yes 42 0.82 Yes 0 0 No -28 0.76 Yes 53 70.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21980227 - NM_000077 CDKN2A 0 . . . 4.93 74.97 31 5.34 No -4 0.75 No 0 0 No -30 0.71 Yes 46 50.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40992617 + NM_001164269 RAD51 0 . . . 3.25 78.25 17 4.58 No 23 0.43 No 0 0 No -16 0.8 Yes 47 60.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90969689 - NM_002485 NBN 0 . . . 1.29 63.96 43 7 Yes 67 0.19 No 0 0 No -42 0.9 Yes 51 35.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56813164 + NM_058216 RAD51C 0 . . . 0.23 0 22 4.56 No 15 1.41 Yes 0 0 No -21 0.56 No 43 95.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29105336 - NM_001005735 CHEK2 0 . . . 1.62 66.31 23 5.38 No 75 0.25 No 0 0 No -25 0.55 No 49 93.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7588665 - NM_000546 TP53 0 . . . 8.06 80.88 13 5.87 Yes 36 1.65 Yes 0 0 No -28 0.67 Yes 46 51.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68596528 + NM_133509 RAD51B 0 . . . 6.3 76.93 34 6.54 Yes 52 -4.61 No 0 0 No -29 0.73 Yes 49 53.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68870048 + NM_004360 CDH1 0 . . . 2.81 71.14 16 4.59 No 72 0.29 No 0 0 No -20 0.81 Yes 49 50.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6037759 - NM_000535 PMS2 0 . . . 2.08 76.63 19 4.82 No 67 -4.97 No 0 0 No -22 0.72 Yes 48 80.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68450840 + NM_133509 RAD51B 0 . . . 0.34 75.37 41 6.48 Yes 7 0.96 Yes 0 0 No -26 0.71 Yes 51 82.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68640848 + NM_133509 RAD51B 0 . . . 6.85 77.3 52 7.44 Yes 59 1.25 Yes 0 0 No -47 0.55 No 35 76.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68814922 + NM_133509 RAD51B 0 . . . 0.33 59.31 21 5.2 No 25 0.94 Yes 0 0 No -20 0.6 No 23 40.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75516645 - NM_001040108 MLH3 0 . . . 0.07 63.11 39 5.55 No 16 0.16 No 0 0 No -32 0.72 Yes 29 83.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68629063 + NM_133509 RAD51B 0 . . . 0.63 59.99 27 4.3 No 22 0.73 No 0 0 No -20 0.46 No 36 62.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47778450 + NM_000251 MSH2 0 . . . 4.54 71.2 22 4.42 No 9 1.64 Yes 0 0 No -21 0.73 Yes 49 91.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59886540 - NM_032043 BRIP1 0 . . . 1.26 71.51 24 5.8 Yes 45 0.69 No 0 0 No -23 0.8 Yes 50 60.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190678761 + NM_000534 PMS1 0 . . . 7.04 83.4 19 4.32 No 45 -2.09 No 0 0 No -27 0.63 No 41 77.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37088305 + NM_000249 MLH1 0 . . . 1.84 72.33 26 5.05 No 30 1.04 Yes 0 0 No -25 0.48 No 28 73.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68790018 + NM_004360 CDH1 0 . . . 6.48 91.28 17 4.8 No 26 0.51 No 0 0 No -40 0.34 No 46 74.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21989922 - NM_000077 CDKN2A 0 . . . 0.46 72.48 38 6.32 Yes 46 1.89 Yes 0 0 No -46 0.38 No 12 72.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68826077 + NM_004360 CDH1 0 . . . 1.05 80.89 16 5.1 No 13 1.51 Yes 0 0 No -19 0.5 No 45 80.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29128077 - NM_001005735 CHEK2 0 . . . 2.99 72.57 33 6.11 Yes 28 -2.63 No 0 0 No -32 0.56 No 30 19.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59780689 - NM_032043 BRIP1 0 . . . 0.89 74.47 18 6.87 Yes 4 0.41 No 0 0 No -31 0.7 Yes 54 88.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68615804 + NM_133509 RAD51B 0 . . . 6.43 75.88 25 4.04 No 31 0.7 No 0 0 No -29 0.58 No 34 47.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68544099 + NM_133509 RAD51B 0 . . . 1.16 73.02 35 6.95 Yes 73 -2.28 No 0 0 No -34 0.72 Yes 50 91.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68998685 + NM_133509 RAD51B 0 . . . 2.72 66.07 27 5.09 No 19 0.69 No 0 0 No -26 0.58 No 41 75.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68531012 + NM_133509 RAD51B 0 . . . 6.68 81.63 34 7.07 Yes 12 0.52 No 0 0 No -31 0.71 Yes 38 61.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68492229 + NM_133509 RAD51B 0 . . . 5.42 74.58 20 4.8 No 42 0.17 No 0 0 No -19 0.55 No 30 86.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41233385 - NM_007294 BRCA1 0 . . . 6.71 94.23 10 5.8 Yes 56 0.35 No 0 0 No -27 0.49 No 53 74.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47731829 + NM_000251 MSH2 0 . . . 6.32 79.01 18 4.24 No 24 -2.36 No 0 0 No -45 0.71 Yes 45 34.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47723647 + NM_000251 MSH2 0 . . . 0.6 0 18 7.4 Yes 53 0.51 No 0 0 No -22 0.45 No 43 21.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89673823 + NM_000314 PTEN 0 . . . 7.1 91.44 19 4.69 No 13 0.69 No 0 0 No -18 0.82 Yes 41 45.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37046928 + NM_000249 MLH1 0 . . . 5.45 85.7 34 5.7 Yes 50 -3.18 No 0 0 No -26 0.86 Yes 41 79.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94198039 - NM_005591 MRE11 0 . . . 2.26 73.13 37 7 Yes 58 -5.95 No 0 0 No -36 0.77 Yes 50 63.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68732585 + NM_133509 RAD51B 0 . . . 1.62 74.02 29 5.06 No 49 0.15 No 0 0 No -28 0.52 No 60 26.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68669234 + NM_133509 RAD51B 0 . . . 0.09 0 13 7.35 Yes 33 1.23 Yes 0 0 No -24 0.58 No 17 36.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89674592 + NM_000314 PTEN 0 . . . 1.07 0 21 6.29 Yes 76 0.89 Yes 0 0 No -20 0.76 Yes 58 63.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23622283 - NM_024675 PALB2 0 . . . 6.92 85.4 30 5.53 No 9 1.07 Yes 0 0 No -29 0.57 No 49 82.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29088616 - NM_001005735 CHEK2 0 . . . 3.15 80.29 9 4.8 No 19 0.76 No 0 0 No -51 0.39 No 39 74.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68659251 + NM_133509 RAD51B 0 . . . 1.69 62.28 37 6.09 Yes 29 1.34 Yes 0 0 No -30 0.41 No 29 64.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215633711 - NM_000465 BARD1 0 . . . 8.22 79.13 17 3.83 No 59 0.16 No 0 0 No -26 0.5 No 44 81.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190661150 + NM_000534 PMS1 0 . . . 3.05 68.1 22 5.15 No 12 0.18 No 0 0 No -21 0.48 No 40 51.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56775568 + NM_058216 RAD51C 0 . . . 4.19 0 40 6.16 Yes 18 1.42 Yes 0 0 No -39 0.57 No 40 94.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29115023 - NM_001005735 CHEK2 0 . . . 4.88 82.37 25 5.34 No 34 1.62 Yes 0 0 No -25 0.81 Yes 24 88.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6048035 - NM_000535 PMS2 0 . . . 4.33 77.61 30 6.83 Yes 69 0.49 No 0 0 No -30 0.79 Yes 50 62.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68387947 + NM_133509 RAD51B 0 . . . 2.57 78.66 21 5.2 No 68 0.8 Yes 0 0 No -23 0.42 No 45 56.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68796909 + NM_133509 RAD51B 0 . . . 5.45 84.28 31 6 Yes 51 -1.76 No 0 0 No -30 0.92 Yes 47 58.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69055852 + NM_133509 RAD51B 0 . . . 0.61 69.49 15 5.39 No 72 0.67 No 0 0 No -50 0.39 No 42 62.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89667722 + NM_000314 PTEN 0 . . . 4.77 77.5 39 5.15 No 43 0.68 No 0 0 No -31 0.63 No 41 59.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807388 + NM_004360 CDH1 0 . . . 1.22 0 21 5.2 No 11 1.1 Yes 0 0 No -31 0.37 No 47 88.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59833442 - NM_032043 BRIP1 0 . . . 6.93 86.42 15 5.04 No 9 0.84 Yes 0 0 No -23 0.42 No 49 72.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59932695 - NM_032043 BRIP1 0 . . . 6.93 81.31 27 5.69 Yes 21 1.81 Yes 0 0 No -26 0.49 No 51 70.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37082524 + NM_000249 MLH1 0 . . . 3.95 77.74 30 5.55 No 21 0.39 No 0 0 No -29 0.68 Yes 51 75.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68823135 + NM_133509 RAD51B 0 . . . 0.86 64.93 18 4.63 No 27 0.28 No 0 0 No -38 0.69 Yes 31 60.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47663366 + NM_000251 MSH2 0 . . . 4.3 77.35 34 5.82 Yes 61 1.16 Yes 0 0 No -31 0.3 No 53 60.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152346359 - NM_005431 XRCC2 0 . . . 3.89 74.89 11 4.91 No 75 0.42 No 0 0 No -22 0.66 No 42 86.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32931566 + NM_000059 BRCA2 0 . . . 6.77 73.79 32 6.32 Yes 25 0.81 Yes 0 0 No -31 0.66 No 41 89.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105192752 + NM_021930 RINT1 0 . . . 8.09 78.43 39 4.18 No 27 0.17 No 0 0 No -25 0.69 Yes 39 38.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68613492 + NM_133509 RAD51B 0 . . . 1.99 68.39 17 3.5 No 75 -5.71 No 0 0 No -38 0.86 Yes 43 42.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69030660 + NM_133509 RAD51B 0 . . . 2.56 70.41 20 6.56 Yes 42 -3.45 No 0 0 No -31 0.49 No 48 52.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23612926 - NM_024675 PALB2 0 . . . 1.79 74.55 32 7.87 Yes 66 0.91 Yes 0 0 No -31 0.94 Yes 48 78.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41271742 - NM_007294 BRCA1 0 . . . 2.25 72.89 32 6.59 Yes 29 1.06 Yes 0 0 No -31 0.73 Yes 25 51.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69122311 + NM_133509 RAD51B 0 . . . 4.51 87.68 21 5.83 Yes 4 0.6 No 0 0 No -20 0.53 No 54 53.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190673713 + NM_000534 PMS1 0 . . . 0.31 0 26 6.08 Yes 17 0.48 No 0 0 No -25 0.89 Yes 27 77.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131944574 + NM_005732 RAD50 0 . . . 0.98 66.96 23 5.1 No 8 0.3 No 0 0 No -23 0.4 No 50 86.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68847443 + NM_004360 CDH1 0 . . . 3.5 78.26 45 8.8 Yes 63 -3.4 No 0 0 No -34 0.76 Yes 50 46.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68716645 + NM_133509 RAD51B 0 . . . 0.15 60.79 21 4.8 No 70 -5.47 No 0 0 No -58 0.69 Yes 50 71.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68742472 + NM_133509 RAD51B 0 . . . 6.34 73.38 48 5.7 Yes 9 1.21 Yes 0 0 No -31 0.71 Yes 49 68.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47696906 + NM_000251 MSH2 0 . . . 1.43 71.71 19 5.45 No 59 0.99 Yes 0 0 No -29 0.67 Yes 42 48.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59771038 - NM_032043 BRIP1 0 . . . 0.91 71.77 17 4.06 No 74 0.3 No 0 0 No -25 0.82 Yes 48 52.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69077001 + NM_133509 RAD51B 0 . . . 0 69.57 29 5 No 42 0.67 No 0 0 No -21 0.46 No 16 90.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69053142 + NM_133509 RAD51B 0 . . . 6.84 76.41 17 4.03 No 51 -4.23 No 0 0 No -24 0.54 No 43 90.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37056476 + NM_000249 MLH1 0 . . . 6.44 86.4 23 4.35 No 14 0.24 No 0 0 No -26 0.72 Yes 44 81.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59779430 - NM_032043 BRIP1 0 . . . 0 62.11 15 5.52 No -4 0.64 No 0 0 No -24 0.7 Yes 43 44.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59900031 - NM_032043 BRIP1 0 . . . 6.93 80.68 30 9.19 Yes 2 0.99 Yes 0 0 No -29 0.52 No 32 67.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68754597 + NM_133509 RAD51B 0 . . . 2.64 0 42 7.18 Yes 52 1.17 Yes 0 0 No -26 0.66 No 35 65.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90997769 - NM_002485 NBN 0 . . . 2 84.2 30 5.42 No 3 0.83 Yes 0 0 No -26 0.8 Yes 50 90.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108178868 + NM_000051 ATM 0 . . . 3.73 82.86 23 4.71 No 0 1.11 Yes 0 0 No -23 0.52 No 26 60.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190677689 + NM_000534 PMS1 0 . . . 6.08 74.29 15 5.39 No 44 -1.7 No 0 0 No -28 0.25 No 46 38.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68576872 + NM_133509 RAD51B 0 . . . 5.93 79.85 29 5.66 Yes 6 0.7 No 0 0 No -25 0.53 No 45 74.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59867509 - NM_032043 BRIP1 0 . . . 0.27 72.04 20 5.46 No 38 0.18 No 0 0 No -26 0.62 No 57 39.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41006556 + NM_001164269 RAD51 0 . . . 6.62 75.29 16 4.69 No 2 1.34 Yes 0 0 No -37 0.5 No 44 76.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68859646 + NM_004360 CDH1 0 . . . 3.51 73.82 44 7.5 Yes 32 1.17 Yes 0 0 No -36 0.39 No 52 61.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105177597 + NM_021930 RINT1 0 . . . 3.97 84.41 18 4.88 No 29 1.05 Yes 0 0 No -24 0.56 No 43 69.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47697834 + NM_000251 MSH2 0 . . . 3.99 76.07 18 5.12 No 59 -1.34 No 0 0 No -22 0.68 Yes 37 56.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69054964 + NM_133509 RAD51B 0 . . . 2.2 70.23 33 5.69 Yes 39 1.38 Yes 0 0 No -32 0.72 Yes 19 64.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68649634 + NM_133509 RAD51B 0 . . . 4.66 81.13 16 4.36 No 24 0.07 No 0 0 No -23 0.9 Yes 33 49.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131979320 + NM_005732 RAD50 0 . . . 2.21 75.94 21 6.07 Yes 51 0.65 No 0 0 No -35 0.52 No 52 54.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84396123 - NM_139076 FAM175A 0 . . . 4.08 84.95 17 4.58 No 63 1.18 Yes 0 0 No -16 0.33 No 48 66.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21991169 - NM_000077 CDKN2A 0 . . . 2.36 67.01 21 6.56 Yes 67 -2.78 No 0 0 No -23 0.57 No 48 58.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190652007 + NM_000534 PMS1 0 . . . 4.08 66.16 26 5.55 No 1 0.59 No 0 0 No -24 0.75 Yes 45 35.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68597379 + NM_133509 RAD51B 0 . . . 1.88 80.87 68 9.07 Yes 48 1.33 Yes 0 0 No -25 0.5 No 23 84.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52442357 - NM_004656 BAP1 0 . . . 1.78 76.39 15 5 No NA NA NA 0 0 No -26 0.78 Yes 54 55.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68879808 + NM_133509 RAD51B 0 . . . 0.48 69.11 27 6.08 Yes 23 0.2 No 0 0 No -23 0.67 Yes 40 72.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68403358 + NM_133509 RAD51B 0 . . . 1.87 67.22 22 4.63 No 25 -2.91 No 0 0 No -34 0.93 Yes 12 41.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21970300 - NM_000077 CDKN2A 0 . . . 3.82 73.1 13 4.36 No 75 2.01 Yes 0 0 No -27 0.79 Yes 45 53.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190671573 + NM_000534 PMS1 0 . . . 5.1 82.44 17 5.2 No 53 0.76 No 0 0 No -44 0.37 No 48 70.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68580708 + NM_133509 RAD51B 0 . . . 6.93 85.32 19 7.07 Yes 2 1.18 Yes 0 0 No -18 0.52 No 39 60.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68490097 + NM_133509 RAD51B 0 . . . 5.84 89.74 9 3.87 No 53 0.7 No 0 0 No -21 0.59 No 46 63.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68450974 + NM_133509 RAD51B 0 . . . 3.24 79.18 24 4.65 No 70 0.92 Yes 0 0 No -23 0.64 No 46 44.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68793913 + NM_133509 RAD51B 0 . . . 2.58 66.91 68 6.85 Yes 23 0.41 No 0 0 No -38 0.3 No 29 38.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47761593 + NM_000251 MSH2 0 . . . 2.49 63.53 22 6.56 Yes 38 0.84 Yes 0 0 No -27 0.61 No 45 34.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190718565 + NM_000534 PMS1 0 . . . 1.35 75.97 29 6.01 Yes 5 1.08 Yes 0 0 No -28 0.84 Yes 47 69.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68787618 + NM_133509 RAD51B 0 . . . 1.79 0 14 3.99 No 35 -1.27 No 0 0 No -20 0.63 No 53 71.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32905373 + NM_000059 BRCA2 0 . . . 1.67 80.12 19 6.12 Yes 67 0.58 No 0 0 No -32 0.77 Yes 44 55.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68578297 + NM_133509 RAD51B 0 . . . 1.47 77.22 23 4.3 No 11 1.07 Yes 0 0 No -22 0.74 Yes 47 90.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41220724 - NM_007294 BRCA1 0 . . . 4.89 81.73 16 4.69 No 75 1.17 Yes 0 0 No -49 0.51 No 51 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59896141 - NM_032043 BRIP1 0 . . . 0.45 76.15 21 4.8 No 38 0.75 No 0 0 No -20 0.87 Yes 37 90.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68924516 + NM_133509 RAD51B 0 . . . 5.79 87 18 4.21 No 23 1.53 Yes 0 0 No -17 0.76 Yes 35 95.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32969516 + NM_000059 BRCA2 0 . . . 8.21 82.52 22 4.57 No 4 1.36 Yes 0 0 No -21 0.58 No 50 49.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68304273 + NM_133509 RAD51B 0 . . . 11.28 81.38 22 6.83 Yes 54 0.51 No 0 0 No -21 0.67 Yes 41 90.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108120147 + NM_000051 ATM 0 . . . 3.96 67.94 23 5 No 37 -3.86 No 0 0 No -23 0.88 Yes 45 80.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37042943 + NM_000249 MLH1 0 . . . 0.21 0 26 5.6 Yes 74 -4.4 No 0 0 No -25 0.72 Yes 38 38.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89643855 + NM_000314 PTEN 0 . . . 2.25 55.42 26 5.48 No 59 0.15 No 0 0 No -25 0.53 No 45 58.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108121832 + NM_000051 ATM 0 . . . 8.51 85.32 27 7.1 Yes -4 0.93 Yes 0 0 No -26 0.76 Yes 45 75.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32973662 + NM_000059 BRCA2 0 . . . 8.28 90.23 17 5.29 No 14 1.73 Yes 0 0 No -21 0.67 Yes 44 79.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68395212 + NM_133509 RAD51B 0 . . . 3.49 81.71 22 5.1 No 55 -5.15 No 0 0 No -21 0.74 Yes 47 66.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47630906 + NM_000251 MSH2 0 . . . 3.76 73.72 26 5.2 No -4 0.1 No 0 0 No -25 0.79 Yes 62 34.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37053244 + NM_000249 MLH1 0 . . . 2.24 75.83 16 4.58 No 5 1.19 Yes 0 0 No -22 0.82 Yes 43 89.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68934037 + NM_133509 RAD51B 0 . . . 0.9 67.1 28 7.14 Yes 69 1.25 Yes 0 0 No -27 0.91 Yes 36 64.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68858592 + NM_004360 CDH1 0 . . . 3.88 0 27 5.74 Yes 62 -4.52 No 0 0 No -26 0.64 No 50 23.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29123635 - NM_001005735 CHEK2 0 . . . 7.67 79.98 34 7.82 Yes 54 0.83 Yes 0 0 No -33 0.78 Yes 49 76.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47718413 + NM_000251 MSH2 0 . . . 3.25 80.12 34 7.51 Yes 8 1.2 Yes 0 0 No -33 0.63 No 50 86.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68299703 + NM_133509 RAD51B 0 . . . 0.53 75.85 33 5.39 No -2 1.19 Yes 0 0 No -32 0.51 No 49 96.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68750173 + NM_133509 RAD51B 0 . . . 1.33 0 29 7.6 Yes 19 1.51 Yes 0 0 No -28 0.95 Yes 39 86.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190723033 + NM_000534 PMS1 0 . . . 0.82 73.68 12 5.18 No 18 0.55 No 0 0 No -26 0.73 Yes 40 62.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68821717 + NM_133509 RAD51B 0 . . . 0.18 0 32 5.7 Yes 56 1.49 Yes 0 0 No -31 0.91 Yes 54 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108184097 + NM_000051 ATM 0 . . . 12.4 86.46 14 3.86 No 14 0.92 Yes 0 0 No -32 0.87 Yes 44 85.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69039876 + NM_133509 RAD51B 0 . . . 5.71 79.95 39 7.34 Yes 71 0.79 Yes 0 0 No -39 0.76 Yes 44 40.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59890253 - NM_032043 BRIP1 0 . . . 3.91 72.36 14 4.47 No 26 0.13 No 0 0 No -13 0.37 No 32 77.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68380436 + NM_133509 RAD51B 0 . . . 4.98 87.46 15 3.87 No 64 0.8 Yes 0 0 No -26 0.62 No 42 91.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215620153 - NM_000465 BARD1 0 . . . 3.54 57.66 32 4.07 No 17 1.16 Yes 0 0 No -31 0.53 No 41 64.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68949535 + NM_133509 RAD51B 0 . . . 4.95 57.32 20 4.9 No 44 -1.22 No 0 0 No -25 0.69 Yes 45 53.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68337880 + NM_133509 RAD51B 0 . . . 1.31 81.52 16 5.57 Yes 65 -4.38 No 0 0 No -24 0.57 No 46 52.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6016153 - NM_000535 PMS2 0 . . . 4.71 83.03 20 5.1 No 42 0.61 No 0 0 No -19 0.39 No 50 71.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68965078 + NM_133509 RAD51B 0 . . . 9.48 76.96 34 5.74 Yes 16 0.8 Yes 0 0 No -33 0.68 Yes 42 90.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108103613 + NM_000051 ATM 0 . . . 3.01 0 22 5.74 Yes 38 1.62 Yes 0 0 No -21 0.86 Yes 40 85.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41002963 + NM_001164269 RAD51 0 . . . 9.05 96.41 15 5.83 Yes 39 1.9 Yes 0 0 No -52 0.9 Yes 43 92.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68862218 + NM_133509 RAD51B 0 . . . 0.45 74.02 30 5.57 Yes 64 -4.26 No 0 0 No -29 0.45 No 24 39.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68643058 + NM_133509 RAD51B 0 . . . 2.6 72.76 28 5.16 No 44 -4.84 No 0 0 No -28 0.47 No 43 36.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59938840 - NM_032043 BRIP1 0 . . . 6.05 77.62 27 5.57 Yes 3 0.07 No 0 0 No -26 0.94 Yes 44 45.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68864618 + NM_004360 CDH1 0 . . . 6.12 79.92 15 6.4 Yes 32 0.59 No 0 0 No -28 0.37 No 46 60.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108107891 + NM_000051 ATM 0 . . . 1.6 74.78 21 5.2 No 37 1.1 Yes 0 0 No -20 0.87 Yes 51 61.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108105309 + NM_000051 ATM 0 . . . 3.72 71.84 15 5.2 No -2 0.19 No 0 0 No -22 0.64 No 47 45.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680043 + NM_000251 MSH2 0 . . . 3.8 87.95 42 7.74 Yes 63 0.07 No 0 0 No -41 0.74 Yes 29 29.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94212700 - NM_005591 MRE11 0 . . . 2.53 63.11 22 4.09 No 8 1.04 Yes 0 0 No -15 0.64 No 44 75.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59822776 - NM_032043 BRIP1 0 . . . 3.32 77.69 25 5.39 No 15 0.91 Yes 0 0 No -24 0.68 Yes 39 63.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59770035 - NM_032043 BRIP1 0 . . . 3.09 67.61 22 3.59 No 45 2.59 Yes 0 0 No -21 0.59 No 19 85.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47774757 + NM_000251 MSH2 0 . . . 1.56 82.08 46 5.95 Yes 29 1.1 Yes 0 0 No -22 0.38 No 45 66.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68790379 + NM_004360 CDH1 0 . . . 1.7 0 31 5.82 Yes 10 1.34 Yes 0 0 No -30 0.8 Yes 48 66.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190667221 + NM_000534 PMS1 0 . . . 7.01 78.87 22 4.99 No 76 0.16 No 0 0 No -21 0.72 Yes 44 38.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68654934 + NM_133509 RAD51B 0 . . . 1.27 68.06 21 4.04 No 64 0.88 Yes 0 0 No -20 0.75 Yes 49 84.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68306721 + NM_133509 RAD51B 0 . . . 5.49 84.46 32 5.61 Yes 4 0.96 Yes 0 0 No -31 0.7 Yes 49 49.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6040288 - NM_000535 PMS2 0 . . . 2.47 73.57 30 5.66 Yes 36 1.3 Yes 0 0 No -29 0.65 No 38 54.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68297910 + NM_133509 RAD51B 0 . . . 3.01 76.41 24 5.48 No 68 0.8 Yes 0 0 No -23 0.84 Yes 63 37.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47706732 + NM_000251 MSH2 0 . . . 5.97 80.39 20 6.17 Yes 75 0.79 Yes 0 0 No -25 0.43 No 47 47.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56783278 + NM_058216 RAD51C 0 . . . 0.37 62.09 19 4.3 No 14 1.21 Yes 0 0 No -27 0.8 Yes 44 71.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68299206 + NM_133509 RAD51B 0 . . . 8.45 75.55 19 4.36 No 18 1.22 Yes 0 0 No -18 0.43 No 39 83.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89641098 + NM_000314 PTEN 0 . . . 3.57 72.43 16 5.07 No 6 1.54 Yes 0 0 No -21 0.51 No 44 71.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90990931 - NM_002485 NBN 0 . . . 4.09 78.11 17 5.29 No 6 1.16 Yes 0 0 No -21 0.56 No 38 81.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75506189 - NM_001040108 MLH3 0 . . . 0.51 0 16 4.69 No 54 1.56 Yes 0 0 No -44 0.25 No 37 52.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215642893 - NM_000465 BARD1 0 . . . 4.1 81.14 29 5.36 No 54 -0.54 No 0 0 No -28 0.75 Yes 50 27.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68893675 + NM_133509 RAD51B 0 . . . 4.75 85.43 38 6.35 Yes 29 0.34 No 0 0 No -37 0.64 No 46 88.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47696775 + NM_000251 MSH2 0 . . . 0.09 74.68 31 6.08 Yes 4 0.41 No 0 0 No -34 0.36 No 54 82.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68883365 + NM_133509 RAD51B 0 . . . 0.57 62.96 23 6.04 Yes 32 1.01 Yes 0 0 No -23 0.79 Yes 49 66.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68812052 + NM_004360 CDH1 0 . . . 1.1 66.46 25 4.4 No 21 0.12 No 0 0 No -24 0.65 No 47 49.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190737971 + NM_000534 PMS1 0 . . . 3.24 62.35 28 5.29 No 65 0.01 No 0 0 No -27 0.7 Yes 19 60.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59904078 - NM_032043 BRIP1 0 . . . 5.09 77.76 11 4.12 No 40 2.07 Yes 0 0 No -32 0.94 Yes 18 92.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68846277 + NM_133509 RAD51B 0 . . . 7.08 79.43 18 4.8 No 13 0.82 Yes 0 0 No -17 0.51 No 45 92.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68812418 + NM_133509 RAD51B 0 . . . 3.02 84.95 13 5.83 Yes 49 0.94 Yes 0 0 No -12 0.53 No 15 60.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90988097 - NM_002485 NBN 0 . . . 1.95 61.63 60 7.92 Yes 67 0.43 No 0 0 No -31 0.44 No 44 63.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640487 + NM_000251 MSH2 0 . . . 4.27 92.4 16 3.62 No 4 1.19 Yes 0 0 No -18 0.55 No 54 58.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190678431 + NM_000534 PMS1 0 . . . 1 65.08 14 5.27 No 65 -5.83 No 0 0 No -27 0.51 No 46 26.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47686612 + NM_000251 MSH2 0 . . . 5.31 77.61 21 5.07 No 54 -1.35 No 0 0 No -20 0.84 Yes 47 89.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108113612 + NM_000051 ATM 0 . . . 1.53 0 18 6.64 Yes 32 0.68 No 0 0 No -17 0.43 No 26 55.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104177752 - NM_001100119 XRCC3 0 . . . 4.09 77.06 20 5.57 Yes 19 0.01 No 0 0 No -19 0.58 No 48 82.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68686512 + NM_133509 RAD51B 0 . . . 1.49 60.27 33 5.82 Yes 70 1.53 Yes 0 0 No -27 0.76 Yes 57 43.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68342895 + NM_133509 RAD51B 0 . . . 2.27 77.56 32 5.26 No 59 -4.87 No 0 0 No -27 0.54 No 46 81.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47788753 + NM_000251 MSH2 0 . . . 0.01 74.41 19 4.28 No -4 0.69 No 0 0 No -22 0.43 No 62 47.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59918413 - NM_032043 BRIP1 0 . . . 5.17 80.8 26 4.65 No 13 0.7 No 0 0 No -28 0.91 Yes 49 56.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68817856 + NM_004360 CDH1 0 . . . 1.13 66.99 11 3.87 No 36 1.55 Yes 0 0 No -23 0.4 No 55 46.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48031789 + NM_000179 MSH6 0 . . . 1.93 81.54 30 6.07 Yes 4 0.63 No 0 0 No -29 0.76 Yes 49 50.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68806200 + NM_133509 RAD51B 0 . . . 2.85 84.49 45 6.61 Yes 25 1.34 Yes 0 0 No -26 0.71 Yes 33 96.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56794375 + NM_058216 RAD51C 0 . . . 3.93 79 26 5.66 Yes 36 1.2 Yes 0 0 No -38 0.39 No 22 75.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29083361 - NM_001005735 CHEK2 0 . . . 4.86 81.8 23 4.9 No 10 0.97 Yes 0 0 No -26 0.8 Yes 48 51.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190728004 + NM_000534 PMS1 0 . . . 3.01 0 26 5.46 No NA NA NA 0 0 No -26 0.47 No 19 31.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94170497 - NM_005591 MRE11 0 . . . 1.37 0 19 4.69 No 57 0.67 No 0 0 No -27 0.42 No 46 52.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69114630 + NM_133509 RAD51B 0 . . . 6.37 72.54 24 4.95 No 57 1.13 Yes 0 0 No -23 0.87 Yes 40 77.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69017505 + NM_133509 RAD51B 0 . . . 5.75 73.39 32 5.74 Yes 1 0.95 Yes 0 0 No -28 0.57 No 50 48.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195629 + NM_000051 ATM 0 . . . 0.06 76.6 55 6.37 Yes 32 0.51 No 0 0 No -31 0.42 No 35 41.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41263253 - NM_007294 BRCA1 0 . . . 0.06 0 11 4.12 No 61 1.57 Yes 0 0 No -28 0.63 No 44 40.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59858763 - NM_032043 BRIP1 0 . . . 2.57 68.03 20 4.42 No 1 1.41 Yes 0 0 No -19 0.47 No 44 41.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68523211 + NM_133509 RAD51B 0 . . . 2.6 71.84 41 5.73 Yes -2 0.5 No 0 0 No -33 0.47 No 60 57.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68937880 + NM_133509 RAD51B 0 . . . 0.45 0 26 6 Yes 72 -5.28 No 0 0 No -26 0.51 No 51 62.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190701292 + NM_000534 PMS1 0 . . . 3.12 81.27 19 5 No 53 -4.45 No 0 0 No -18 0.48 No 47 75.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68715173 + NM_133509 RAD51B 0 . . . 2.47 72.08 30 7.17 Yes 75 1.21 Yes 0 0 No -29 0.8 Yes 29 51.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108212529 + NM_000051 ATM 0 . . . 5.61 81.54 16 4.69 No 55 0.77 Yes 0 0 No -18 0.8 Yes 48 51.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29122091 - NM_001005735 CHEK2 0 . . . 3.51 83.78 23 4.17 No 32 1.34 Yes 0 0 No -22 0.86 Yes 26 53.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1209969 + NM_000455 STK11 0 . . . 1.01 67.89 22 5.1 No 26 1.45 Yes 0 0 No -21 0.86 Yes 51 57.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69113852 + NM_133509 RAD51B 0 . . . 8.85 88.62 31 6.57 Yes 20 0.23 No 0 0 No -30 0.55 No 44 33.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190667685 + NM_000534 PMS1 0 . . . 4.07 79.98 25 5.38 No 70 -4.6 No 0 0 No -24 0.46 No 51 25.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40993423 + NM_001164269 RAD51 0 . . . 4.5 78.07 16 5.1 No 9 0.26 No 0 0 No -20 0.54 No 48 43.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59780143 - NM_032043 BRIP1 0 . . . 2.16 76.5 23 4.16 No 6 0.31 No 0 0 No -22 0.28 No 56 40.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68352966 + NM_133509 RAD51B 0 . . . 6.18 76.92 22 5.74 Yes 4 0.8 Yes 0 0 No -26 0.72 Yes 38 69.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47655687 + NM_000251 MSH2 0 . . . 5.72 76.53 16 4.47 No 58 0.49 No 0 0 No -15 0.58 No 48 74.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47639845 + NM_000251 MSH2 0 . . . 0.83 61.74 16 4.23 No 54 1.11 Yes 0 0 No -52 0.43 No 34 41.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68777798 + NM_133509 RAD51B 0 . . . 0.02 58.84 14 4.71 No 59 -4.24 No 0 0 No -19 0.22 No 46 85.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68823920 + NM_133509 RAD51B 0 . . . 3.73 68.27 15 4.58 No 21 1.22 Yes 0 0 No -49 0.82 Yes 37 79.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48016658 + NM_000179 MSH6 0 . . . 6.18 73.04 34 6.71 Yes 2 1.2 Yes 0 0 No -32 0.49 No 45 61.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41256403 - NM_007294 BRCA1 0 . . . 3.3 60.94 59 7.4 Yes 71 0.9 Yes 0 0 No -47 0.81 Yes 35 43.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68479262 + NM_133509 RAD51B 0 . . . 0.37 70.42 23 5.37 No 48 0.88 Yes 0 0 No -44 0.81 Yes 39 19.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29082407 - NM_001005735 CHEK2 0 . . . 2.02 0 22 6.46 Yes 63 -3.66 No 0 0 No -21 0.81 Yes 52 40.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68495160 + NM_133509 RAD51B 0 . . . 3.23 77.19 18 5.81 Yes 30 0.55 No 0 0 No -17 0.42 No 45 89.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69078653 + NM_133509 RAD51B 0 . . . 0.52 61.01 45 6.92 Yes 60 0.88 Yes 0 0 No -27 0.8 Yes 53 37.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68766740 + NM_133509 RAD51B 0 . . . 4.13 85.07 18 4.9 No 64 0.8 Yes 0 0 No -43 0.88 Yes 54 59.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108193997 + NM_000051 ATM 0 . . . 2.97 74.84 42 6.04 Yes 74 -4.09 No 0 0 No -30 0.48 No 39 50.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29098915 - NM_001005735 CHEK2 0 . . . 7.68 84.51 20 4.47 No 62 -2.89 No 0 0 No -19 0.91 Yes 36 45.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94167444 - NM_005591 MRE11 0 . . . 2.78 76.21 21 4.58 No 70 0.44 No 0 0 No -20 0.87 Yes 50 32.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32961580 + NM_000059 BRCA2 0 . . . 0.13 63.8 31 4.65 No 12 0.44 No 0 0 No -30 0.75 Yes 46 74.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215656910 - NM_000465 BARD1 0 . . . 4.26 74.85 75 8.87 Yes 50 0.91 Yes 0 0 No -31 0.51 No 48 42.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41000346 + NM_001164269 RAD51 0 . . . 3.02 66.39 16 5.92 Yes 44 1.53 Yes 0 0 No -15 0.48 No 38 63.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32896239 + NM_000059 BRCA2 0 . . . 2.91 73.94 25 7.4 Yes 21 0.27 No 0 0 No -30 0.33 No 37 62.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6031536 - NM_000535 PMS2 0 . . . 3.28 72.7 34 5.52 No 74 0.87 Yes 0 0 No -20 0.59 No 46 77.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75507631 - NM_001040108 MLH3 0 . . . 2.93 73.25 26 6.03 Yes 58 -4.2 No 0 0 No -25 0.65 No 45 55.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29124779 - NM_001005735 CHEK2 0 . . . 3.3 72.84 34 5.06 No 33 1.18 Yes 0 0 No -33 0.9 Yes 25 40.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84394406 - NM_139076 FAM175A 0 . . . 1.32 78.77 35 7.09 Yes 11 0.25 No 0 0 No -34 0.69 Yes 47 84.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56784534 + NM_058216 RAD51C 0 . . . 2.52 68.99 25 5.39 No 50 0.82 Yes 0 0 No -24 0.84 Yes 41 50.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152373625 - NM_005431 XRCC2 0 . . . 2.35 85.1 31 5.56 Yes 64 1.1 Yes 0 0 No -30 0.9 Yes 45 88.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68562341 + NM_133509 RAD51B 0 . . . 0.65 60.66 18 4.71 No 57 1 Yes 0 0 No -17 0.52 No 40 78.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105175588 + NM_021930 RINT1 0 . . . 5.65 81.35 24 5.87 Yes 0 0.41 No 0 0 No -23 0.39 No 45 87.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68801319 + NM_133509 RAD51B 0 . . . 4.19 73.98 20 5.57 Yes 43 -3.24 No 0 0 No -19 0.67 Yes 47 82.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68810110 + NM_133509 RAD51B 0 . . . 8.11 71.59 40 6.21 Yes 30 0.82 Yes 0 0 No -39 0.67 Yes 28 74.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108138611 + NM_000051 ATM 0 . . . 2.84 65.17 30 5.47 No 60 -2.26 No 0 0 No -26 0.64 No 43 54.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41000661 + NM_001164269 RAD51 0 . . . 4.97 82.44 22 5.92 Yes 58 0.7 No 0 0 No -21 0.89 Yes 55 49.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21983901 - NM_000077 CDKN2A 0 . . . 1.02 67.34 11 4.12 No 69 1.09 Yes 0 0 No -30 0.66 Yes 45 91.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90984040 - NM_002485 NBN 0 . . . 3.64 77.08 33 5.42 No 6 0.56 No 0 0 No -32 0.59 No 44 65.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105196692 + NM_021930 RINT1 0 . . . 5.09 84.69 28 5.29 No 1 1.23 Yes 0 0 No -27 0.82 Yes 46 68.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89675312 + NM_000314 PTEN 0 . . . 3.86 65.67 9 3.87 No 42 0.47 No 0 0 No -36 0.59 No 44 86.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90976710 - NM_002485 NBN 0 . . . 0.37 74.38 46 7.12 Yes 18 0.23 No 0 0 No -32 0.58 No 24 61.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68804188 + NM_004360 CDH1 0 . . . 0.85 65.84 20 5.1 No 24 1.6 Yes 0 0 No -19 0.73 Yes 34 80.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59844480 - NM_032043 BRIP1 0 . . . 5.31 69.66 21 5.15 No 12 1.11 Yes 0 0 No -26 0.62 No 46 77.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47770361 + NM_000251 MSH2 0 . . . 0.65 53.17 25 6.28 Yes 16 1.53 Yes 0 0 No -23 0.26 No 42 81.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29124685 - NM_001005735 CHEK2 0 . . . 0.79 0 15 5.23 No 26 1.36 Yes 0 0 No -21 0.27 No 32 97.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131967732 + NM_005732 RAD50 0 . . . 10.88 85.38 32 7.55 Yes 21 0.7 No 0 0 No -31 0.61 No 37 73.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131946336 + NM_005732 RAD50 0 . . . 2.2 70.55 20 4.85 No 63 -2.88 No 0 0 No -33 0.59 No 31 88.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68642451 + NM_133509 RAD51B 0 . . . 1.06 72.06 12 6.48 Yes 0 0.18 No 0 0 No -43 0.73 Yes 46 64.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47721135 + NM_000251 MSH2 0 . . . 5.36 83.71 16 4.69 No 70 -2.59 No 0 0 No -16 0.34 No 46 56.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68707547 + NM_133509 RAD51B 0 . . . 0.89 69.45 19 5.96 Yes 9 0.95 Yes 0 0 No -18 0.55 No 49 53.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6030762 - NM_000535 PMS2 0 . . . 2.19 64.84 51 12.64 Yes 70 0.42 No 0 0 No -54 0.78 Yes 37 64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190717407 + NM_000534 PMS1 0 . . . 3.69 75.56 32 5.74 Yes 44 0.76 No 0 0 No -28 0.42 No 47 89.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131908382 + NM_005732 RAD50 0 . . . 8.88 92.69 29 5.92 Yes 67 0.58 No 0 0 No -28 0.9 Yes 41 59.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68656811 + NM_133509 RAD51B 0 . . . 2.42 69.9 22 5.29 No 68 -4.06 No 0 0 No -19 0.41 No 46 55.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497360 + NM_133509 RAD51B 0 . . . 3.13 77.61 85 9.4 Yes 23 0.33 No 0 0 No -27 0.76 Yes 50 72.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131908983 + NM_005732 RAD50 0 . . . 2.72 74.36 35 6.53 Yes 67 0.37 No 0 0 No -34 0.42 No 40 39.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68699512 + NM_133509 RAD51B 0 . . . 0.58 0 17 6.93 Yes 14 1.94 Yes 0 0 No -29 0.57 No 44 82.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68626942 + NM_133509 RAD51B 0 . . . 0.77 72.35 24 5.38 No 50 1.1 Yes 0 0 No -23 0.88 Yes 47 79.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108170375 + NM_000051 ATM 0 . . . 0.12 0 25 5.57 Yes 66 -5.12 No 0 0 No -29 0.65 No 51 77.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68780738 + NM_004360 CDH1 0 . . . 0.72 74.68 15 5.08 No 54 0.64 No 0 0 No -24 0.51 No 37 73.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1223794 + NM_000455 STK11 0 . . . 0.63 70.19 31 5.74 Yes 33 -2.63 No 0 0 No -30 0.86 Yes 44 72.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131961267 + NM_005732 RAD50 0 . . . 2.84 71.33 16 6.84 Yes 37 0.59 No 0 0 No -22 0.54 No 44 62.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68668069 + NM_133509 RAD51B 0 . . . 1.1 72.61 17 5.99 Yes 34 0.19 No 0 0 No -31 0.57 No 52 21.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68780050 + NM_133509 RAD51B 0 . . . 2.05 80.78 38 5.11 No 35 0.79 Yes 0 0 No -33 0.47 No 49 43.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29139300 - NM_001005735 CHEK2 0 . . . 2.43 0 19 4.46 No 19 0.83 Yes 0 0 No -22 0.82 Yes 39 69.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68585632 + NM_133509 RAD51B 0 . . . 7.67 87.42 18 3.97 No 53 0.32 No 0 0 No -22 0.72 Yes 41 90.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47638090 + NM_000251 MSH2 0 . . . 1.96 80.12 35 6.03 Yes 7 1.02 Yes 0 0 No -34 0.56 No 51 80.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215635755 - NM_000465 BARD1 0 . . . 4.37 79.35 22 4.68 No 4 1.48 Yes 0 0 No -21 0.97 Yes 47 65.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32942343 + NM_000059 BRCA2 0 . . . 4.02 80.12 64 8.58 Yes 9 1.23 Yes 0 0 No -26 0.48 No 49 86.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47647569 + NM_000251 MSH2 0 . . . 5.33 72.42 27 5.12 No 23 1.08 Yes 0 0 No -26 0.7 Yes 35 77.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131956645 + NM_005732 RAD50 0 . . . 4.21 78.36 28 4.82 No 12 0.5 No 0 0 No -27 0.42 No 34 66.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131936819 + NM_005732 RAD50 0 . . . 0.07 0 21 7.21 Yes 45 0.96 Yes 0 0 No -20 0.78 Yes 39 45.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40990647 + NM_001164269 RAD51 0 . . . 2.89 68.34 32 8.46 Yes 21 1.7 Yes 0 0 No -31 0.89 Yes 37 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68392460 + NM_133509 RAD51B 0 . . . 5.4 72.61 56 8.92 Yes 66 2.18 Yes 0 0 No -27 0.64 No 45 82.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84394259 - NM_139076 FAM175A 0 . . . 1.1 0 31 5.48 No 13 1.07 Yes 0 0 No -29 0.26 No 45 92.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68665671 + NM_133509 RAD51B 0 . . . 1.53 0 27 5.73 Yes 63 0.39 No 0 0 No -29 0.76 Yes 37 64.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69086780 + NM_133509 RAD51B 0 . . . 12.93 94.06 33 6.65 Yes 17 0.11 No 0 0 No -32 0.35 No 41 72.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68618580 + NM_133509 RAD51B 0 . . . 4.74 84.41 9 5 No 33 0.62 No 0 0 No -24 0.81 Yes 24 71.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29135039 - NM_001005735 CHEK2 0 . . . 5.64 77.96 13 5.29 No 59 1.05 Yes 0 0 No -21 0.54 No 40 91.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190659873 + NM_000534 PMS1 0 . . . 2.62 62.85 35 6.08 Yes 30 0.4 No 0 0 No -34 0.77 Yes 51 48.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68365396 + NM_133509 RAD51B 0 . . . 0.92 68.38 29 4.63 No 45 0.62 No 0 0 No -23 0.39 No 51 90.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84387493 - NM_139076 FAM175A 0 . . . 4.16 0 10 4 No 20 0.42 No 0 0 No -29 0.42 No 38 76.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37052305 + NM_000249 MLH1 0 . . . 0.35 63.12 31 7 Yes 23 1.47 Yes 0 0 No -27 0.54 No 40 61.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68526654 + NM_133509 RAD51B 0 . . . 1.02 63.73 25 6.19 Yes 75 0.26 No 0 0 No -24 0.79 Yes 23 69.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59941122 - NM_032043 BRIP1 0 . . . 1.2 62.26 18 5.49 No 43 0.23 No 0 0 No -52 0.27 No 44 79.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90943875 - NM_002485 NBN 0 . . . 4.87 0 19 5 No 54 1.12 Yes 0 0 No -18 0.56 No 33 85.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215629024 - NM_000465 BARD1 0 . . . 0.1 73 23 4.98 No 62 1.31 Yes 0 0 No -27 0.64 No 26 91.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23636627 - NM_024675 PALB2 0 . . . 1.97 84.79 28 6.24 Yes 4 0.29 No 0 0 No -27 0.89 Yes 54 64.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108164240 + NM_000051 ATM 0 . . . 6.15 83.54 24 4.78 No 21 0.29 No 0 0 No -21 0.42 No 48 45.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23621676 - NM_024675 PALB2 0 . . . 2.46 76.63 14 5.19 No 15 0.2 No 0 0 No -21 0.89 Yes 39 50.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32951009 + NM_000059 BRCA2 0 . . . 4.22 84.42 31 5.66 Yes 71 -3.36 No 0 0 No -30 0.51 No 52 47.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68740314 + NM_133509 RAD51B 0 . . . 8.51 83.59 16 5.92 Yes 72 -3.37 No 0 0 No -31 0.47 No 47 74.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131936807 + NM_005732 RAD50 0 . . . 1.64 86.31 17 5.57 Yes 33 0.98 Yes 0 0 No -28 0.88 Yes 51 64.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68738128 + NM_133509 RAD51B 0 . . . 4.92 81.26 38 6.58 Yes 12 0.41 No 0 0 No -37 0.64 No 46 62.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668965 - NM_000465 BARD1 0 . . . 3.7 0 30 8.42 Yes 76 -6.65 No 0 0 No -29 0.61 No 43 28.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59835733 - NM_032043 BRIP1 0 . . . 2.42 67.63 45 6.57 Yes 43 0.69 No 0 0 No -37 0.49 No 22 70.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89627613 + NM_000314 PTEN 0 . . . 9.33 83.58 23 4.76 No 53 1.15 Yes 0 0 No -23 0.66 No 42 59.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75480326 - NM_001040108 MLH3 0 . . . 6.67 92.15 16 4.37 No 72 -4.03 No 0 0 No -24 0.66 No 46 53.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37064445 + NM_000249 MLH1 0 . . . 8.98 83.15 13 3.98 No 30 0.36 No 0 0 No -19 0.4 No 33 71.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59800612 - NM_032043 BRIP1 0 . . . 5.7 76.81 23 4.89 No 22 1.54 Yes 0 0 No -22 0.75 Yes 45 60.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59884878 - NM_032043 BRIP1 0 . . . 8.52 81.74 31 5.88 Yes 4 1.01 Yes 0 0 No -32 0.37 No 38 54.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104170671 - NM_001100119 XRCC3 0 . . . 0.73 0 31 5.63 Yes 11 0.84 Yes 0 0 No -31 0.69 Yes 47 74.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47729863 + NM_000251 MSH2 0 . . . 0.13 67.07 33 5.83 Yes 67 -5.17 No 0 0 No -32 0.45 No 44 63.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7570428 - NM_000546 TP53 0 . . . 3.18 72.02 34 6.05 Yes 14 0.15 No 0 0 No -33 0.64 No 44 83.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68509427 + NM_133509 RAD51B 0 . . . 6.95 92.4 42 5.71 Yes 5 1.17 Yes 0 0 No -24 0.55 No 46 71.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47697087 + NM_000251 MSH2 0 . . . 0.32 85.65 17 5.68 Yes 70 0.44 No 0 0 No -25 0.75 Yes 51 35.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21985907 - NM_000077 CDKN2A 0 . . . 7.8 85.3 22 5.29 No 15 0.45 No 0 0 No -21 0.44 No 50 48.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68322632 + NM_133509 RAD51B 0 . . . 1.47 0 20 5.1 No 24 2.03 Yes 0 0 No -19 0.71 Yes 34 91.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47783232 + NM_000251 MSH2 0 . . . 1.93 84.98 33 6.38 Yes 2 1.05 Yes 0 0 No -32 0.4 No 48 61.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68783650 + NM_133509 RAD51B 0 . . . 3.26 71.56 29 5.3 No 35 0.57 No 0 0 No -28 0.73 Yes 43 87.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131934918 + NM_005732 RAD50 0 . . . 1.82 67.5 21 7.17 Yes 68 0.51 No 0 0 No -28 0.67 Yes 45 42.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59936172 - NM_032043 BRIP1 0 . . . 2.67 66.04 13 5 No 72 0.74 No 0 0 No -21 0.4 No 40 37.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41201334 - NM_007294 BRCA1 0 . . . 4.4 76.78 34 5.58 Yes 38 0.69 No 0 0 No -27 0.51 No 42 60.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59858568 - NM_032043 BRIP1 0 . . . 1.09 76.14 22 5.27 No 2 1.29 Yes 0 0 No -30 0.5 No 46 80.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90946411 - NM_002485 NBN 0 . . . 2.78 0 22 5.1 No 49 -5.73 No 0 0 No -21 0.95 Yes 52 87.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68597998 + NM_133509 RAD51B 0 . . . 4.17 81.21 34 5.91 Yes -3 0.04 No 0 0 No -28 0.78 Yes 44 84.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1208284 + NM_000455 STK11 0 . . . 9.15 89.7 29 5.26 No 53 1.87 Yes 0 0 No -21 0.62 No 53 82.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69085623 + NM_133509 RAD51B 0 . . . 7.29 89.08 21 5.11 No 6 0.81 Yes 0 0 No -20 0.69 Yes 52 83.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190703899 + NM_000534 PMS1 0 . . . 5.57 85.86 13 5.48 No 60 1.39 Yes 0 0 No -38 0.4 No 43 67.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69064243 + NM_133509 RAD51B 0 . . . 0.28 76.6 21 6.16 Yes 50 -0.83 No 0 0 No -20 0.89 Yes 47 35.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108238797 + NM_000051 ATM 0 . . . 3.16 73.77 19 5.32 No 1 1.17 Yes 0 0 No -23 0.86 Yes 48 80.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37051338 + NM_000249 MLH1 0 . . . 5.76 90.92 20 5.23 No 15 0.04 No 0 0 No -23 0.68 Yes 43 34.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68701345 + NM_133509 RAD51B 0 . . . 3.98 66.03 15 4.46 No 50 -3.19 No 0 0 No -24 0.61 No 46 65.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152367265 - NM_005431 XRCC2 0 . . . 2.9 87.45 30 5.25 No 53 -3.36 No 0 0 No -29 0.86 Yes 45 34.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89677577 + NM_000314 PTEN 0 . . . 1.17 68.33 28 5.83 Yes 35 0.75 No 0 0 No -28 0.77 Yes 47 64.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152346208 - NM_005431 XRCC2 0 . . . 6.52 79.11 36 5.7 Yes 71 -4.04 No 0 0 No -33 0.85 Yes 46 33.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23636187 - NM_024675 PALB2 0 . . . 1.98 67.66 43 5.47 No 17 -2.12 No 0 0 No -29 0.54 No 10 42.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89677864 + NM_000314 PTEN 0 . . . 1.33 76.85 29 5.43 No 76 1.48 Yes 0 0 No -28 0.71 Yes 50 42.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94157596 - NM_005591 MRE11 0 . . . 3.87 82.91 35 5.71 Yes 73 0.17 No 0 0 No -28 0.46 No 47 47.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68626544 + NM_133509 RAD51B 0 . . . 11.45 74.68 27 5.72 Yes 33 1.01 Yes 0 0 No -26 0.74 Yes 47 83.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59766866 - NM_032043 BRIP1 0 . . . 1.22 66.71 69 8.81 Yes 6 0.2 No 0 0 No -25 0.66 Yes 41 63.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215626152 - NM_000465 BARD1 0 . . . 2.33 70.11 14 4.49 No 63 1.02 Yes 0 0 No -20 0.56 No 43 50.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21995449 - NM_000077 CDKN2A 0 . . . 0.94 61.69 22 6.48 Yes 33 -3.29 No 0 0 No -24 0.45 No 35 41.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23629720 - NM_024675 PALB2 0 . . . 9.52 82.22 31 4.91 No 70 -1.62 No 0 0 No -16 0.22 No 24 87.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29094908 - NM_001005735 CHEK2 0 . . . 5.25 81.85 34 7.87 Yes 23 0.78 Yes 0 0 No -33 0.68 Yes 49 79.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68345917 + NM_133509 RAD51B 0 . . . 0.1 0 23 5.29 No 60 -3.94 No 0 0 No -27 0.53 No 55 52.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152354220 - NM_005431 XRCC2 0 . . . 1.41 84.22 20 4.25 No 76 1.47 Yes 0 0 No -17 0.54 No 50 60.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59829675 - NM_032043 BRIP1 0 . . . 4.98 78.47 17 4.47 No 5 1.27 Yes 0 0 No -36 0.61 No 31 85.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89698492 + NM_000314 PTEN 0 . . . 1.47 0 16 9.22 Yes 33 -3.79 No 0 0 No -33 0.48 No 45 55.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68354746 + NM_133509 RAD51B 0 . . . 8.37 81.18 37 4.51 No 58 0.54 No 0 0 No -36 0.89 Yes 36 38.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997541 + NM_001164269 RAD51 0 . . . 0.37 0 19 5.66 Yes 27 0.95 Yes 0 0 No -18 0.7 Yes 22 53.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59871825 - NM_032043 BRIP1 0 . . . 1.29 71.89 21 4.9 No 11 0.97 Yes 0 0 No -20 0.93 Yes 47 92.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131896502 + NM_005732 RAD50 0 . . . 5.89 75.03 23 5.39 No 72 0.39 No 0 0 No -23 0.59 No 36 49.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68510374 + NM_133509 RAD51B 0 . . . 3.22 68.6 26 8.48 Yes 45 0.16 No 0 0 No -31 0.86 Yes 40 48.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68576102 + NM_133509 RAD51B 0 . . . 3.9 72.81 23 4.94 No 71 0.6 No 0 0 No -22 0.71 Yes 30 86.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41020946 + NM_001164269 RAD51 0 . . . 2.58 63.26 50 7.26 Yes 68 0.78 Yes 0 0 No -49 0.36 No 28 51.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68871535 + NM_133509 RAD51B 0 . . . 1.98 75.33 23 3.96 No 48 0.59 No 0 0 No -23 0.78 Yes 36 48.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68854997 + NM_133509 RAD51B 0 . . . 7.18 93.79 20 4.16 No 9 1.08 Yes 0 0 No -19 0.6 No 49 88.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59846992 - NM_032043 BRIP1 0 . . . 3.64 74.32 15 4.58 No 26 1 Yes 0 0 No -57 0.71 Yes 16 55.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47755786 + NM_000251 MSH2 0 . . . 0.08 60.68 34 7.38 Yes 12 0.83 Yes 0 0 No -33 0.71 Yes 46 74.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41243357 - NM_007294 BRCA1 0 . . . 2.19 62.89 33 5.98 Yes 30 0.91 Yes 0 0 No -32 0.6 No 28 38.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56813606 + NM_058216 RAD51C 0 . . . 2.44 71.07 29 6.69 Yes -3 -1.87 No 0 0 No -28 0.9 Yes 23 73.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69006115 + NM_133509 RAD51B 0 . . . 2.95 73.85 38 8.17 Yes 67 0.84 Yes 0 0 No -30 0.85 Yes 50 41.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108120403 + NM_000051 ATM 0 . . . 3.14 68.59 28 4.98 No 11 0.31 No 0 0 No -27 0.75 Yes 47 65.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75488559 - NM_001040108 MLH3 0 . . . 5.94 77.92 16 4.55 No 56 0.8 Yes 0 0 No -21 0.26 No 45 81.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47751074 + NM_000251 MSH2 0 . . . 4.31 0 19 5.92 Yes 5 0.57 No 0 0 No -29 0.35 No 53 90.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105175697 + NM_021930 RINT1 0 . . . 3.84 88.76 31 5.57 Yes 60 1.07 Yes 0 0 No -24 0.85 Yes 42 92.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68928412 + NM_133509 RAD51B 0 . . . 3.51 76.22 59 7.61 Yes 31 0.75 No 0 0 No -22 0.39 No 24 50.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47767421 + NM_000251 MSH2 0 . . . 6.38 78.31 13 5.36 No 4 1.36 Yes 0 0 No -22 0.54 No 41 64.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68508087 + NM_133509 RAD51B 0 . . . 9.75 81.61 27 5.74 Yes 13 1.5 Yes 0 0 No -26 0.85 Yes 45 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94189724 - NM_005591 MRE11 0 . . . 1.84 84.67 28 6.18 Yes 26 0.66 No 0 0 No -32 0.7 Yes 48 77.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104177740 - NM_001100119 XRCC3 0 . . . 4.69 0 38 7.48 Yes 31 0.01 No 0 0 No -37 0.7 Yes 50 92.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47695448 + NM_000251 MSH2 0 . . . 0.62 0 20 5.57 Yes 11 0.81 Yes 0 0 No -19 0.58 No 47 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190681969 + NM_000534 PMS1 0 . . . 7.23 84.09 33 6.42 Yes 10 0.24 No 0 0 No -22 0.73 Yes 42 71.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68701129 + NM_133509 RAD51B 0 . . . 3.21 73.81 29 7.68 Yes 42 -4.13 No 0 0 No -28 0.94 Yes 47 49.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56790782 + NM_058216 RAD51C 0 . . . 6.49 76.68 16 6.06 Yes 30 -2.58 No 0 0 No -27 0.68 Yes 44 80.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6021534 - NM_000535 PMS2 0 . . . 0.27 0 30 4.97 No 14 0.5 No 0 0 No -29 0.74 Yes 44 85.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68343358 + NM_133509 RAD51B 0 . . . 5.7 82.86 24 5.34 No 22 0.04 No 0 0 No -23 0.55 No 49 50.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68378378 + NM_133509 RAD51B 0 . . . 6.94 75.32 36 6.05 Yes 26 0.44 No 0 0 No -35 0.68 Yes 37 65.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90954333 - NM_002485 NBN 0 . . . 2.85 79.06 18 5.49 No 34 0.5 No 0 0 No -18 0.41 No 23 83.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59800289 - NM_032043 BRIP1 0 . . . 10.51 90.87 17 4.8 No 52 0.53 No 0 0 No -36 0.65 No 28 73.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68949911 + NM_133509 RAD51B 0 . . . 6.34 80.68 43 6.81 Yes 32 0.45 No 0 0 No -22 0.67 Yes 50 55.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108138768 + NM_000051 ATM 0 . . . 2.96 0 29 5.16 No 29 0.15 No 0 0 No -25 0.8 Yes 51 82.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23643434 - NM_024675 PALB2 0 . . . 0.27 64.03 18 4.29 No 26 0.82 Yes 0 0 No -17 0.81 Yes 40 64.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68723764 + NM_133509 RAD51B 0 . . . 4.71 72.89 18 4.64 No 42 0.65 No 0 0 No -18 0.46 No 54 65.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152366619 - NM_005431 XRCC2 0 . . . 0.59 74.68 16 4.23 No 53 0.63 No 0 0 No -24 0.6 No 36 58.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69101786 + NM_133509 RAD51B 0 . . . 10.85 88.77 31 5.48 No 27 1.03 Yes 0 0 No -23 0.65 No 41 76.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68478385 + NM_133509 RAD51B 0 . . . 1.48 69.56 33 5.82 Yes 27 0.7 No 0 0 No -32 0.51 No 48 56.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68993752 + NM_133509 RAD51B 0 . . . 0.4 65.95 27 5.74 Yes -1 0.23 No 0 0 No -26 0.84 Yes 41 77.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47748093 + NM_000251 MSH2 0 . . . 1.73 75.66 26 5.04 No -4 0.15 No 0 0 No -25 0.86 Yes 48 70.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68416627 + NM_133509 RAD51B 0 . . . 0.51 64.94 29 6.97 Yes 68 1.03 Yes 0 0 No -28 0.54 No 40 72.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29101113 - NM_001005735 CHEK2 0 . . . 1.44 74.14 18 4.36 No 15 0.33 No 0 0 No -33 0.63 No 43 69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90995852 - NM_002485 NBN 0 . . . 0.36 67.89 55 7.81 Yes 9 1.49 Yes 0 0 No -47 0.71 Yes 46 74.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68528811 + NM_133509 RAD51B 0 . . . 4.88 72.62 21 4.69 No 71 -1.93 No 0 0 No -20 0.7 Yes 42 73.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89644592 + NM_000314 PTEN 0 . . . 0.28 67.54 28 6.03 Yes 37 0.88 Yes 0 0 No -27 0.86 Yes 49 45.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59812456 - NM_032043 BRIP1 0 . . . 2.62 63.28 17 4.12 No -2 0.43 No 0 0 No -28 0.79 Yes 48 41.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41263187 - NM_007294 BRCA1 0 . . . 0.3 74.79 28 8.48 Yes 49 0.75 No 0 0 No -27 0.65 No 49 71.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190667517 + NM_000534 PMS1 0 . . . 3.31 0 45 8.54 Yes 8 2.03 Yes 0 0 No -21 0.55 No 35 78.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215605524 - NM_000465 BARD1 0 . . . 5.42 75.14 16 4.69 No 7 0.95 Yes 0 0 No -28 0.63 No 51 28.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32895911 + NM_000059 BRCA2 0 . . . 2.47 73.56 45 6.06 Yes 22 1.22 Yes 0 0 No -44 0.46 No 36 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69136214 + NM_133509 RAD51B 0 . . . 1.67 80.3 16 4.68 No 14 -1.26 No 0 0 No -51 0.56 No 53 50.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402868 + NM_133509 RAD51B 0 . . . 5.66 82.79 21 7.21 Yes 64 0.7 No 0 0 No -20 0.83 Yes 47 60.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68855158 + NM_133509 RAD51B 0 . . . 5.33 74.43 21 5.19 No 36 0.65 No 0 0 No -29 0.5 No 45 63.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75515984 - NM_001040108 MLH3 0 . . . 6.68 74.09 15 4.58 No 12 0.01 No 0 0 No -21 0.59 No 40 38.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69118643 + NM_133509 RAD51B 0 . . . 0.05 0 11 4.12 No 46 -2.47 No 0 0 No -25 0.41 No 37 59.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68705136 + NM_133509 RAD51B 0 . . . 1.37 85.25 41 6.82 Yes 8 0.52 No 0 0 No -27 0.35 No 50 88.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68507417 + NM_133509 RAD51B 0 . . . 1.33 75.21 28 5.12 No 55 0.47 No 0 0 No -27 0.47 No 46 26.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68802202 + NM_133509 RAD51B 0 . . . 3 0 15 4.58 No 15 1.13 Yes 0 0 No -18 0.26 No 35 71.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68534740 + NM_133509 RAD51B 0 . . . 6.07 81.04 17 5.05 No -2 0.23 No 0 0 No -23 0.77 Yes 46 92.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47695327 + NM_000251 MSH2 0 . . . 4.88 86.11 14 4.47 No 37 0.48 No 0 0 No -22 0.58 No 40 53.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68794728 + NM_133509 RAD51B 0 . . . 4 74.51 30 4.96 No 4 2 Yes 0 0 No -23 0.64 No 54 47.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37058541 + NM_000249 MLH1 0 . . . 2.1 68.19 16 4.69 No -3 0.31 No 0 0 No -33 0.87 Yes 52 45.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69129690 + NM_133509 RAD51B 0 . . . 8.14 81.81 16 5.1 No 33 0.67 No 0 0 No -21 0.45 No 47 60.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68437921 + NM_133509 RAD51B 0 . . . 3.15 73.42 24 3.53 No 74 0.75 No 0 0 No -23 0.83 Yes 44 52.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68826801 + NM_004360 CDH1 0 . . . 3.99 0 27 4.53 No 70 0.85 Yes 0 0 No -33 0.53 No 36 74.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47806316 + NM_000251 MSH2 0 . . . 7.33 76.56 19 5.05 No 2 0.67 No 0 0 No -28 0.89 Yes 40 74.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68837085 + NM_004360 CDH1 0 . . . 4.81 81.93 31 5.59 Yes 16 0.21 No 0 0 No -30 0.87 Yes 41 68.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190743894 + NM_000534 PMS1 0 . . . 2.33 75.16 19 5.48 No 62 -2.86 No 0 0 No -18 0.67 Yes 42 59.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68476296 + NM_133509 RAD51B 0 . . . 0.08 68.55 25 4.9 No 29 1.25 Yes 0 0 No -22 0.55 No 46 54.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90996156 - NM_002485 NBN 0 . . . 0.76 69.29 33 6.06 Yes 9 0.06 No 0 0 No -32 0.58 No 26 66.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105172401 + NM_021930 RINT1 0 . . . 5.24 72.11 19 8.67 Yes 44 -1.86 No 0 0 No -18 0.5 No 42 39.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90944615 - NM_002485 NBN 0 . . . 3.4 80.15 42 6.81 Yes 28 0.59 No 0 0 No -21 0.61 No 41 77.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68549656 + NM_133509 RAD51B 0 . . . 1.89 68.54 35 5.83 Yes 75 0.49 No 0 0 No -28 0.54 No 39 44.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215614451 - NM_000465 BARD1 0 . . . 6.88 75.57 36 6 Yes 6 1.04 Yes 0 0 No -35 0.62 No 52 56.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68800852 + NM_133509 RAD51B 0 . . . 0.29 61.29 45 6.22 Yes 13 0.84 Yes 0 0 No -32 0.87 Yes 45 59.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68540395 + NM_133509 RAD51B 0 . . . 6 80.14 21 4.64 No 8 1.17 Yes 0 0 No -20 0.75 Yes 50 68.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89684879 + NM_000314 PTEN 0 . . . 3.6 72.74 25 4.9 No 10 0.27 No 0 0 No -24 0.62 No 48 55.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68857433 + NM_004360 CDH1 0 . . . 1.58 70.14 10 4.8 No -3 0.42 No 0 0 No -25 0.86 Yes 32 38.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84389054 - NM_139076 FAM175A 0 . . . 2.08 0 23 5.31 No 7 1 Yes 0 0 No -22 0.57 No 40 47.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215640480 - NM_000465 BARD1 0 . . . 3.33 81.04 54 6.06 Yes 23 0.75 No 0 0 No -28 0.75 Yes 48 55.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32921187 + NM_000059 BRCA2 0 . . . 0.39 0 17 5.29 No 52 1.33 Yes 0 0 No -16 0.34 No 43 56.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108160685 + NM_000051 ATM 0 . . . 5.52 79.49 38 5.89 Yes 50 1.51 Yes 0 0 No -22 0.52 No 43 88.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190669938 + NM_000534 PMS1 0 . . . 2.34 75.97 16 4 No 19 0.16 No 0 0 No -52 0.58 No 34 34.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68757354 + NM_133509 RAD51B 0 . . . 4.93 86.46 29 5.92 Yes 35 0.87 Yes 0 0 No -22 0.59 No 46 69.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68825540 + NM_004360 CDH1 0 . . . 0.39 0 21 5 No 37 1.04 Yes 0 0 No -36 0.4 No 21 79.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68745112 + NM_133509 RAD51B 0 . . . 2.7 79.14 23 5.95 Yes 43 1.1 Yes 0 0 No -22 0.67 Yes 46 76.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68716891 + NM_133509 RAD51B 0 . . . 4.61 77.96 29 7.68 Yes 3 0.86 Yes 0 0 No -28 0.79 Yes 42 90.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68708657 + NM_133509 RAD51B 0 . . . 1.14 72.48 28 6.29 Yes 46 0.83 Yes 0 0 No -27 0.92 Yes 46 65.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89686301 + NM_000314 PTEN 0 . . . 4.57 73.04 25 5.57 Yes -3 0.74 No 0 0 No -24 0.82 Yes 44 88.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68761183 + NM_133509 RAD51B 0 . . . 3.86 73.54 18 5.17 No 72 -6.44 No 0 0 No -27 0.68 Yes 44 79.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108143017 + NM_000051 ATM 0 . . . 1.15 71.94 14 4.89 No 13 0.56 No 0 0 No -22 0.9 Yes 44 50.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7592340 - NM_000546 TP53 0 . . . 7.51 83.42 14 5.83 Yes 48 1.24 Yes 0 0 No -30 0.91 Yes 50 41.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68893954 + NM_133509 RAD51B 0 . . . 3.32 74.41 15 4.95 No 57 -5.38 No 0 0 No -18 0.42 No 49 94.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68804003 + NM_133509 RAD51B 0 . . . 4.99 92.15 17 4.29 No 14 0.3 No 0 0 No -24 0.65 No 44 69.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59916828 - NM_032043 BRIP1 0 . . . 6.74 80.93 18 5.39 No 11 1.51 Yes 0 0 No -17 0.59 No 47 69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47796273 + NM_000251 MSH2 0 . . . 1.45 76.03 29 5.82 Yes 7 1.04 Yes 0 0 No -28 0.94 Yes 51 90.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89634031 + NM_000314 PTEN 0 . . . 11.44 86.38 17 6.47 Yes 29 1.5 Yes 0 0 No -16 0.76 Yes 49 61.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29137271 - NM_001005735 CHEK2 0 . . . 7.25 77.01 34 6.07 Yes 61 -2.88 No 0 0 No -33 0.9 Yes 48 49.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47785892 + NM_000251 MSH2 0 . . . 4.61 77.96 33 7.9 Yes -1 0.02 No 0 0 No -32 0.68 Yes 49 58.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108111205 + NM_000051 ATM 0 . . . 3.32 68.17 28 5.53 No 74 -3.91 No 0 0 No -27 0.57 No 36 68.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105203422 + NM_021930 RINT1 0 . . . 2.4 79.5 35 5.56 Yes 11 0.43 No 0 0 No -28 0.9 Yes 47 94.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68872205 + NM_133509 RAD51B 0 . . . 4.58 78.79 33 7.05 Yes -3 0.54 No 0 0 No -24 0.54 No 37 59.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33436360 - NM_002878 RAD51D 0 . . . 0.27 0 13 4.36 No 59 -3.92 No 0 0 No -21 0.8 Yes 51 94.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108142584 + NM_000051 ATM 0 . . . 1.11 70.95 31 5.12 No -3 0.3 No 0 0 No -33 0.34 No 51 73.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108135243 + NM_000051 ATM 0 . . . 0.35 0 12 5.74 Yes 44 -4.46 No 0 0 No -19 0.48 No 42 42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41258592 - NM_007294 BRCA1 0 . . . 3.05 82.31 32 5.74 Yes 69 0.4 No 30 0.48 Yes -28 0.44 No 33 67.18 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 47731878 + NM_000251 MSH2 0 . . . 0.87 64.04 20 6.78 Yes 73 -3.7 No 0 0 No -24 0.57 No 49 45.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47727995 + NM_000251 MSH2 0 . . . 0.19 74.02 31 5.89 Yes 73 1.42 Yes 0 0 No -30 0.73 Yes 49 58.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90982152 - NM_002485 NBN 0 . . . 4.51 87.63 35 8.58 Yes 57 -1.14 No 0 0 No -34 0.4 No 44 71.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47645648 + NM_000251 MSH2 0 . . . 8.01 87.56 34 7.02 Yes 0 0.37 No 0 0 No -28 0.73 Yes 41 62.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90977417 - NM_002485 NBN 0 . . . 9.36 80.02 33 5.3 No 74 0.69 No 0 0 No -40 0.53 No 21 54.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75516132 - NM_001040108 MLH3 0 . . . 1.31 82.24 34 7.67 Yes 58 -3.55 No 0 0 No -28 0.72 Yes 52 34.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108119835 + NM_000051 ATM 0 . . . 1.2 64.68 22 5.74 Yes 7 0.65 No 0 0 No -21 0.48 No 37 79.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68374597 + NM_133509 RAD51B 0 . . . 1.71 68.56 39 7.16 Yes 57 -3.53 No 0 0 No -25 0.67 Yes 39 49.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131913838 + NM_005732 RAD50 0 . . . 1.3 0 23 4.84 No 13 1.24 Yes 0 0 No -22 0.75 Yes 38 64.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45793889 - NM_001048171 MUTYH 0 . . . 3.2 68.22 16 4.69 No 34 -0.13 No 0 0 No -24 0.93 Yes 43 62.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68999686 + NM_133509 RAD51B 0 . . . 5.31 75.01 13 5.15 No 4 0.65 No 0 0 No -46 0.7 Yes 49 44.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21978706 - NM_000077 CDKN2A 0 . . . 1.9 83.77 16 3.83 No 42 -2 No 0 0 No -24 0.83 Yes 51 49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68780468 + NM_133509 RAD51B 0 . . . 4.34 63.41 32 5.74 Yes 23 1.16 Yes 0 0 No -28 0.51 No 41 45.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68838199 + NM_004360 CDH1 0 . . . 5.76 85.02 26 5.1 No 72 0.96 Yes 0 0 No -25 0.84 Yes 53 64.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68621016 + NM_133509 RAD51B 0 . . . 3.5 76.89 27 6.04 Yes -3 -1.62 No 0 0 No -25 0.49 No 62 39.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90981934 - NM_002485 NBN 0 . . . 2.41 68.34 21 5.1 No 32 0.71 No 0 0 No -20 0.79 Yes 40 65.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68414856 + NM_133509 RAD51B 0 . . . 6.04 71.88 27 5.37 No 40 -2.16 No 0 0 No -31 0.53 No 44 76.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215613246 - NM_000465 BARD1 0 . . . 9.95 87.11 21 5.17 No 10 0.81 Yes 0 0 No -20 0.64 No 48 93.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48021366 + NM_000179 MSH6 0 . . . 1.28 74.68 29 5.53 No 53 0.64 No 0 0 No -24 0.65 No 50 90.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37068645 + NM_000249 MLH1 0 . . . 1.55 74.68 47 6.85 Yes 28 0.39 No 0 0 No -21 0.57 No 43 65.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69024725 + NM_133509 RAD51B 0 . . . 1.44 73.45 28 7.06 Yes 70 -3.91 No 0 0 No -27 0.48 No 47 50.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59802881 - NM_032043 BRIP1 0 . . . 4.99 80.73 16 4.33 No 28 1.14 Yes 0 0 No -25 0.66 Yes 38 74.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68484007 + NM_133509 RAD51B 0 . . . 8.01 78.82 9 5 No 9 1.22 Yes 0 0 No -44 0.4 No 49 87.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108117999 + NM_000051 ATM 0 . . . 4.56 78.12 16 4.83 No 24 0.32 No 0 0 No -25 0.48 No 43 58.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47705097 + NM_000251 MSH2 0 . . . 4.13 63.32 34 5.92 Yes NA NA NA 0 0 No -33 0.74 Yes 40 25.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41214902 - NM_007294 BRCA1 0 . . . 0.06 61.25 13 5.4 No 67 -4.54 No 0 0 No -25 0.44 No 42 19.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105176332 + NM_021930 RINT1 0 . . . 8.12 72.08 20 4.17 No 53 0.69 No 0 0 No -25 0.62 No 43 62.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89644784 + NM_000314 PTEN 0 . . . 4.67 79.22 13 4.36 No 76 -2.12 No 0 0 No -41 0.59 No 45 44.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47647853 + NM_000251 MSH2 0 . . . 4.7 76.46 22 5.05 No 33 1.47 Yes 0 0 No -54 0.54 No 50 37.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75483762 - NM_001040108 MLH3 0 . . . 1.21 70.15 15 5.2 No 12 -1.93 No 0 0 No -46 0.32 No 15 31.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108167357 + NM_000051 ATM 0 . . . 0.06 0 23 4.8 No 65 1.51 Yes 0 0 No -22 0.67 Yes 26 41.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94183258 - NM_005591 MRE11 0 . . . 0.92 61.82 52 7.52 Yes 6 0.96 Yes 0 0 No -24 0.64 No 43 59.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68409197 + NM_133509 RAD51B 0 . . . 2.63 73.8 20 6.71 Yes 11 0.2 No 0 0 No -19 0.93 Yes 47 80.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190661421 + NM_000534 PMS1 0 . . . 1.59 66.45 39 6.98 Yes 68 0.52 No 0 0 No -43 0.36 No 40 62.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69040538 + NM_133509 RAD51B 0 . . . 0.87 78.99 24 3.37 No 74 -1.34 No 0 0 No -20 0.65 No 23 55.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68966151 + NM_133509 RAD51B 0 . . . 5.97 83.78 16 4.69 No 60 1.3 Yes 0 0 No -43 0.79 Yes 51 60.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68753644 + NM_133509 RAD51B 0 . . . 7.58 82.15 93 7.39 Yes 23 1.09 Yes 0 0 No -33 0.92 Yes 43 63.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68865630 + NM_133509 RAD51B 0 . . . 2.59 71.81 26 4.51 No 14 1.1 Yes 0 0 No -25 0.71 Yes 44 92.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105182444 + NM_021930 RINT1 0 . . . 3.78 68.66 25 4.98 No 48 0.56 No 0 0 No -24 0.67 Yes 34 62.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89690844 + NM_000314 PTEN 0 . . . 5.53 77.97 16 5.29 No 44 0.48 No 0 0 No -34 0.58 No 48 62.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152355593 - NM_005431 XRCC2 0 . . . 8.34 88.49 24 4.87 No 0 0.21 No 0 0 No -23 0.89 Yes 47 76.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131943343 + NM_005732 RAD50 0 . . . 2.45 72.14 18 4.24 No 31 0.34 No 0 0 No -24 0.53 No 41 51.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45805061 - NM_001048171 MUTYH 0 . . . 2.8 69.9 23 4.77 No 9 0.66 No 0 0 No -22 0.47 No 41 56.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23612732 - NM_024675 PALB2 0 . . . 2.65 66.06 76 8.76 Yes 7 0.87 Yes 0 0 No -16 0.58 No 41 56.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69122600 + NM_133509 RAD51B 0 . . . 0.58 80.95 27 4.14 No -3 0.39 No 0 0 No -26 0.69 Yes 53 21.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68406631 + NM_133509 RAD51B 0 . . . 4.58 65.81 20 6.16 Yes 68 -4.66 No 0 0 No -56 0.61 No 57 33.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68589172 + NM_133509 RAD51B 0 . . . 1.79 73.35 23 6.23 Yes 70 -3.82 No 0 0 No -22 0.88 Yes 45 68.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59814581 - NM_032043 BRIP1 0 . . . 1.81 72.35 19 4.9 No 19 0.37 No 0 0 No -19 0.31 No 47 66.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59910948 - NM_032043 BRIP1 0 . . . 1.3 68.95 19 5.36 No 16 1.1 Yes 0 0 No -25 0.59 No 42 91.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190715922 + NM_000534 PMS1 0 . . . 3.72 69.44 17 4.63 No 2 1.21 Yes 0 0 No -32 0.77 Yes 44 93.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69056600 + NM_133509 RAD51B 0 . . . 5.27 75.12 18 4.32 No 50 0.79 Yes 0 0 No -17 0.31 No 49 88.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59861477 - NM_032043 BRIP1 0 . . . 6.49 83.83 18 4.39 No 73 0.36 No 0 0 No -17 0.42 No 36 51.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108237339 + NM_000051 ATM 0 . . . 7.56 87.5 22 6.16 Yes 14 0.3 No 0 0 No -21 0.87 Yes 44 89.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68675605 + NM_133509 RAD51B 0 . . . 0.74 75.52 30 4.3 No 65 -5.63 No 0 0 No -29 0.43 No 46 50.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68510797 + NM_133509 RAD51B 0 . . . 7.65 83.12 14 5.97 Yes 20 0.27 No 0 0 No -28 0.56 No 40 44.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68310118 + NM_133509 RAD51B 0 . . . 3.3 82.21 17 5.35 No 40 -2.34 No 20 0.31 Yes -19 0.44 No 51 85.67 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 215599425 - NM_000465 BARD1 0 . . . 8.13 85.22 27 6.6 Yes 58 -3.46 No 0 0 No -26 0.95 Yes 42 57.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105199378 + NM_021930 RINT1 0 . . . 1.63 79.13 30 5.37 No 58 -3.99 No 0 0 No -25 0.63 No 50 73.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68964795 + NM_133509 RAD51B 0 . . . 4.34 79.95 19 5.81 Yes 11 1.05 Yes 0 0 No -26 0.43 No 47 78.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59833358 - NM_032043 BRIP1 0 . . . 0.81 70.84 25 6.55 Yes 18 -3.25 No 0 0 No -24 0.8 Yes 41 53.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215647447 - NM_000465 BARD1 0 . . . 4.64 81.39 28 6.13 Yes -3 -0.65 No 0 0 No -24 0.33 No 52 70.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68320627 + NM_133509 RAD51B 0 . . . 3 77.47 17 4.58 No 76 -4.24 No 0 0 No -16 0.64 No 47 51.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47691950 + NM_000251 MSH2 0 . . . 2.53 77.87 35 3.81 No 53 -3.63 No 0 0 No -42 0.34 No 48 90.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6050564 - NM_000535 PMS2 0 . . . 1.59 80.21 17 4.47 No 4 1.14 Yes 0 0 No -23 0.61 No 46 64.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33442321 - NM_002878 RAD51D 0 . . . 6.53 77.7 42 6.7 Yes 44 0.49 No 0 0 No -41 0.55 No 47 85.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68410757 + NM_133509 RAD51B 0 . . . 4.07 74.72 33 6.53 Yes 40 0.68 No 0 0 No -32 0.72 Yes 45 26.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69134783 + NM_133509 RAD51B 0 . . . 5.71 70.88 31 5.45 No 17 -1.87 No 0 0 No -28 0.48 No 44 62.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108124826 + NM_000051 ATM 0 . . . 0.47 67.14 19 7.07 Yes 66 0.5 No 0 0 No -18 0.61 No 40 79.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131891822 + NM_005732 RAD50 0 . . . 5.74 81.58 21 4.67 No 19 0.57 No 0 0 No -20 0.77 Yes 44 65.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68885502 + NM_133509 RAD51B 0 . . . 3.59 79.75 42 6.4 Yes 41 0.23 No 0 0 No -41 0.54 No 51 88.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6019452 - NM_000535 PMS2 0 . . . 0.63 0 23 6.16 Yes 36 1.51 Yes 0 0 No -22 0.62 No 42 73.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29101668 - NM_001005735 CHEK2 0 . . . 2.83 73.52 14 4.56 No 23 1.6 Yes 0 0 No -53 0.6 No 40 70.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68465924 + NM_133509 RAD51B 0 . . . 3.14 0 21 3.79 No 43 1.91 Yes 0 0 No -20 0.57 No 33 79.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68632417 + NM_133509 RAD51B 0 . . . 2.36 77.1 29 5.92 Yes 2 0.68 No 0 0 No -28 0.82 Yes 49 52.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47676462 + NM_000251 MSH2 0 . . . 6.24 89.69 18 5.39 No 8 1.37 Yes 0 0 No -22 0.67 Yes 43 82.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68382133 + NM_133509 RAD51B 0 . . . 0.44 0 30 6.56 Yes 70 0.59 No 0 0 No -29 0.88 Yes 55 56.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68587505 + NM_133509 RAD51B 0 . . . 7.33 71.4 36 5.98 Yes 63 0.88 Yes 0 0 No -40 0.66 Yes 45 64.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69036356 + NM_133509 RAD51B 0 . . . 7.64 82.57 17 4.8 No 55 -2.49 No 0 0 No -19 0.61 No 49 85.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6037317 - NM_000535 PMS2 0 . . . 3.87 69.79 23 6.08 Yes 56 0.31 No 0 0 No -30 0.69 Yes 42 57.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68795351 + NM_004360 CDH1 0 . . . 5.47 82.84 18 5.65 Yes 34 1.98 Yes 0 0 No -27 0.89 Yes 41 56.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41219888 - NM_007294 BRCA1 0 . . . 0.09 0 29 7.06 Yes 42 1.44 Yes 0 0 No -28 0.95 Yes 27 76.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47789687 + NM_000251 MSH2 0 . . . 3.51 82.72 13 4.56 No 21 0.06 No 0 0 No -16 0.68 Yes 53 63.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47666373 + NM_000251 MSH2 0 . . . 0.82 77.18 28 5.69 Yes 62 1.23 Yes 0 0 No -28 0.47 No 44 81.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45793671 - NM_001048171 MUTYH 0 . . . 0.22 0 19 4.79 No 50 -0.37 No 0 0 No -18 0.64 No 23 72.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68748074 + NM_133509 RAD51B 0 . . . 3.52 72.21 20 5.26 No 62 0.35 No 0 0 No -27 0.87 Yes 45 41.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131970271 + NM_005732 RAD50 0 . . . 2.31 70.95 47 8.04 Yes 66 1.47 Yes 0 0 No -47 0.64 No 15 34.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69080337 + NM_133509 RAD51B 0 . . . 1.6 58.94 47 6.98 Yes 56 0.87 Yes 0 0 No -34 0.54 No 44 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105177812 + NM_021930 RINT1 0 . . . 7.27 82.31 17 6.93 Yes 57 0.95 Yes 0 0 No -25 0.38 No 42 64.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47778844 + NM_000251 MSH2 0 . . . 0.06 0 35 6.39 Yes 32 0.64 No 0 0 No -34 0.67 Yes 38 43.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47650768 + NM_000251 MSH2 0 . . . 3.6 85.02 17 4.69 No 4 1.05 Yes 0 0 No -23 0.53 No 54 74.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47663112 + NM_000251 MSH2 0 . . . 1.81 71.25 26 5.41 No 42 0.4 No 0 0 No -30 0.59 No 32 95.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89668674 + NM_000314 PTEN 0 . . . 2.82 69.56 22 5.17 No 52 -1.08 No 0 0 No -21 0.87 Yes 21 79.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59844440 - NM_032043 BRIP1 0 . . . 3.61 76.02 25 5 No 52 1.09 Yes 0 0 No -24 0.44 No 48 48.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152350579 - NM_005431 XRCC2 0 . . . 2.75 70.95 17 4.12 No 17 0.22 No 0 0 No -31 0.69 Yes 41 63.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215634364 - NM_000465 BARD1 0 . . . 1.41 84.22 21 4.72 No 33 1.14 Yes 0 0 No -20 0.8 Yes 50 87.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68480858 + NM_133509 RAD51B 0 . . . 1.52 72.7 28 5.33 No 42 0.88 Yes 0 0 No -27 0.78 Yes 35 83.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21986466 - NM_000077 CDKN2A 0 . . . 6.86 77.87 52 5.27 No 5 0.07 No 0 0 No -51 0.63 No 53 40.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69083628 + NM_133509 RAD51B 0 . . . 9.8 88.51 36 4.84 No 2 2.37 Yes 0 0 No -25 0.64 No 48 84.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215675226 - NM_000465 BARD1 0 . . . 7 88.87 14 5.09 No 36 1 Yes 0 0 No -19 0.63 No 45 42.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68406861 + NM_133509 RAD51B 0 . . . 0.62 70.42 36 5.99 Yes 28 1.3 Yes 0 0 No -25 0.52 No 54 30.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33446619 - NM_002878 RAD51D 0 . . . 1.63 71.2 17 4.8 No 42 -2.55 No 0 0 No -16 0.23 No 16 74.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84398567 - NM_139076 FAM175A 0 . . . 3.49 77.7 24 5.48 No 0 0.26 No 0 0 No -23 0.85 Yes 41 43.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1213325 + NM_000455 STK11 0 . . . 2.1 0 10 5.1 No 12 0.94 Yes 0 0 No -23 0.75 Yes 46 78.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68417199 + NM_133509 RAD51B 0 . . . 3.71 73.71 31 5.96 Yes 8 -1.03 No 0 0 No -30 0.91 Yes 50 37.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68917237 + NM_133509 RAD51B 0 . . . 2.19 74.37 33 4.25 No 61 1.45 Yes 0 0 No -32 0.51 No 44 38.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68738415 + NM_133509 RAD51B 0 . . . 6.71 82.43 22 4.23 No 43 1.34 Yes 0 0 No -24 0.88 Yes 46 33.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47744981 + NM_000251 MSH2 0 . . . 5.09 78.46 24 6.55 Yes 49 0.31 No 0 0 No -23 0.6 No 40 69.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108179894 + NM_000051 ATM 0 . . . 6.74 82.96 21 8.1 Yes 6 0.31 No 0 0 No -24 0.85 Yes 41 49.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68840646 + NM_133509 RAD51B 0 . . . 1.46 82.16 21 7.21 Yes 7 0.4 No 0 0 No -20 0.84 Yes 27 40.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33447044 - NM_002878 RAD51D 0 . . . 5.52 76.07 24 7.42 Yes 15 -2.04 No 0 0 No -23 0.85 Yes 45 50.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41025853 + NM_001164269 RAD51 0 . . . 1.29 77.94 46 5.45 No 21 0.49 No 0 0 No -35 0.55 No 14 63.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48009963 + NM_000179 MSH6 0 . . . 8.13 85.35 42 7.41 Yes 37 0.13 No 0 0 No -26 0.46 No 40 37.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68490857 + NM_133509 RAD51B 0 . . . 1.28 0 22 4.49 No 33 0.03 No 0 0 No -17 0.52 No 25 73.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68497197 + NM_133509 RAD51B 0 . . . 1.85 63.56 13 5.42 No 49 1.01 Yes 0 0 No -19 0.31 No 58 40.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215634803 - NM_000465 BARD1 0 . . . 2.43 64.34 49 6.52 Yes 76 1.61 Yes 0 0 No -41 0.5 No 49 55.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47778080 + NM_000251 MSH2 0 . . . 4.04 91.97 31 6.93 Yes 37 1.53 Yes 0 0 No -30 0.81 Yes 21 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89702990 + NM_000314 PTEN 0 . . . 5.89 78.5 13 4.36 No 32 1.42 Yes 0 0 No -35 0.64 No 49 61.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47700245 + NM_000251 MSH2 0 . . . 1.14 75.66 21 4.66 No 33 1.12 Yes 0 0 No -21 0.43 No 50 68.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48035521 + NM_000179 MSH6 0 . . . 3.99 82.07 12 3.78 No 7 0.33 No 0 0 No -29 0.47 No 28 61.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68637031 + NM_133509 RAD51B 0 . . . 1.18 0 18 4.84 No 29 1.15 Yes 0 0 No -42 0.65 No 29 86.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7586887 - NM_000546 TP53 0 . . . 0.65 66.77 26 4.78 No -1 0.85 Yes 0 0 No -25 0.75 Yes 51 47.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69041929 + NM_133509 RAD51B 0 . . . 0.95 65.89 20 5.57 Yes 3 0.73 No 0 0 No -57 0.32 No 55 74.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68993662 + NM_133509 RAD51B 0 . . . 1.5 64.9 22 3.66 No 22 0.82 Yes 0 0 No -21 0.47 No 36 94.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131973151 + NM_005732 RAD50 0 . . . 1.3 0 20 5.64 Yes 47 -3.29 No 0 0 No -27 0.41 No 51 52.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152373145 - NM_005431 XRCC2 0 . . . 5.99 0 11 5.29 No 37 0.32 No 0 0 No -21 0.44 No 50 54.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84399187 - NM_139076 FAM175A 0 . . . 4.23 80.92 52 5.56 Yes 76 0.46 No 0 0 No -34 0.87 Yes 43 85.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68782225 + NM_004360 CDH1 0 . . . 5.72 85.14 12 3.52 No 32 1.78 Yes 0 0 No -19 0.65 No 44 51.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45806821 - NM_001048171 MUTYH 0 . . . 2.91 74.14 32 5.74 Yes 57 0.32 No 0 0 No -47 0.45 No 50 46.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68472823 + NM_133509 RAD51B 0 . . . 4.85 81.41 19 5.38 No 36 0.49 No 0 0 No -22 0.47 No 47 75.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37056833 + NM_000249 MLH1 0 . . . 4.65 72.1 21 5.77 Yes -3 0.51 No 0 0 No -20 0.5 No 40 50.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59762091 - NM_032043 BRIP1 0 . . . 4.64 75.98 29 4.6 No 5 -1.24 No 0 0 No -28 0.8 Yes 43 60.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190667135 + NM_000534 PMS1 0 . . . 1.65 72.02 25 5.1 No 60 -3.43 No 0 0 No -24 0.5 No 37 35.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190737945 + NM_000534 PMS1 0 . . . 7.64 78.82 50 6.9 Yes 39 0.04 No 0 0 No -37 0.53 No 45 72.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41195451 - NM_007294 BRCA1 0 . . . 3.15 77.47 31 5.74 Yes 14 0.95 Yes 0 0 No -30 0.91 Yes 44 93.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6047399 - NM_000535 PMS2 0 . . . 1.51 0 29 5.66 Yes 38 0.48 No 0 0 No -29 0.71 Yes 31 62.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68793141 + NM_133509 RAD51B 0 . . . 6.1 83.61 30 5.57 Yes 28 0.77 Yes 0 0 No -22 0.27 No 47 65.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215643061 - NM_000465 BARD1 0 . . . 1.14 63.83 20 7.14 Yes 21 0.46 No 0 0 No -19 0.56 No 37 47.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68874918 + NM_133509 RAD51B 0 . . . 0.36 63.13 23 4.93 No 53 -5.6 No 0 0 No -28 0.65 No 48 20.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47738507 + NM_000251 MSH2 0 . . . 3.25 69.42 30 5.39 No 34 0.52 No 0 0 No -29 0.81 Yes 47 52.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48012868 + NM_000179 MSH6 0 . . . 0.09 61.75 12 4.61 No 67 -6.29 No 0 0 No -22 0.54 No 54 41.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1229023 + NM_000455 STK11 0 . . . 3.13 70.94 16 5.34 No NA NA NA 0 0 No -26 0.25 No 32 16.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56806357 + NM_058216 RAD51C 0 . . . 1.65 70.75 21 4.79 No 52 0.47 No 0 0 No -20 0.82 Yes 48 69.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68968526 + NM_133509 RAD51B 0 . . . 0.34 0 28 5.48 No 46 0.46 No 0 0 No -27 0.73 Yes 33 41.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59906376 - NM_032043 BRIP1 0 . . . 6.1 70.57 20 5.93 Yes 66 1.1 Yes 0 0 No -29 0.67 Yes 15 55.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68730898 + NM_133509 RAD51B 0 . . . 4.98 90.03 17 5.29 No 62 -1.62 No 0 0 No -21 0.52 No 55 50.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68761239 + NM_133509 RAD51B 0 . . . 2.03 77.18 38 6.36 Yes 25 0.12 No 0 0 No -23 0.46 No 20 30.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56771201 + NM_058216 RAD51C 0 . . . 0.25 78 33 6.16 Yes 59 -3.93 No 0 0 No -25 0.56 No 60 41.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68955483 + NM_133509 RAD51B 0 . . . 2.15 71.39 37 7.19 Yes 26 0.5 No 0 0 No -36 0.79 Yes 47 63.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152363152 - NM_005431 XRCC2 0 . . . 2.1 80.26 17 5.38 No 49 0.59 No 0 0 No -24 0.37 No 45 73.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68964329 + NM_133509 RAD51B 0 . . . 1.9 68.76 24 5.4 No 58 -5.48 No 0 0 No -24 0.56 No 44 62.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68362637 + NM_133509 RAD51B 0 . . . 1.76 75.75 23 1.48 No 37 1.15 Yes 0 0 No -36 0.26 No 49 65.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37090276 + NM_000249 MLH1 0 . . . 2.69 0 38 6.07 Yes 27 1.43 Yes 0 0 No -31 0.51 No 53 72.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47789299 + NM_000251 MSH2 0 . . . 3.73 0 29 5.54 No 44 -3.07 No 0 0 No -28 0.95 Yes 56 37.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48027328 + NM_000179 MSH6 0 . . . 0.8 54.98 37 6.9 Yes 51 0.21 No 0 0 No -37 0.54 No 23 40.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41014020 + NM_001164269 RAD51 0 . . . 2.13 71.87 59 8.69 Yes 43 0.09 No 0 0 No -34 0.31 No 42 53.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47692931 + NM_000251 MSH2 0 . . . 4.52 77.97 23 5.2 No 52 0.73 No 0 0 No -22 0.33 No 47 61.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68732846 + NM_133509 RAD51B 0 . . . 3.8 81.93 37 6.37 Yes 62 0.96 Yes 0 0 No -36 0.77 Yes 49 55.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215625449 - NM_000465 BARD1 0 . . . 1.01 76.89 20 4.79 No 2 1.25 Yes 0 0 No -19 0.75 Yes 37 46.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68444159 + NM_133509 RAD51B 0 . . . 3.79 68.01 16 4.69 No 20 0.54 No 0 0 No -23 0.31 No 38 51.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108146303 + NM_000051 ATM 0 . . . 1.26 67.52 20 5.44 No 44 -4.34 No 0 0 No -26 0.51 No 56 77.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131892491 + NM_005732 RAD50 0 . . . 0.16 0 11 4.85 No 30 0.51 No 0 0 No -25 0.8 Yes 28 63.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47683479 + NM_000251 MSH2 0 . . . 3 76.16 30 5.03 No 71 0.62 No 0 0 No -28 0.42 No 43 81.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23640699 - NM_024675 PALB2 0 . . . 1 67.39 15 5.29 No 73 0.44 No 0 0 No -21 0.47 No 44 87.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131901725 + NM_005732 RAD50 0 . . . 4.41 70.03 45 6.61 Yes 47 0.39 No 0 0 No -23 0.61 No 30 45.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108136874 + NM_000051 ATM 0 . . . 1.88 72.54 26 5.23 No 23 0.88 Yes 0 0 No -25 0.58 No 35 68.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68601653 + NM_133509 RAD51B 0 . . . 1.65 70.01 27 5.32 No 50 0.91 Yes 0 0 No -50 0.48 No 56 27.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108184066 + NM_000051 ATM 0 . . . 12.6 88.1 23 5.22 No 17 0.8 Yes 0 0 No -22 0.92 Yes 41 50.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90989265 - NM_002485 NBN 0 . . . 2.51 68.38 16 4.98 No 64 -4.26 No 0 0 No -20 0.54 No 37 87.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215626461 - NM_000465 BARD1 0 . . . 2.55 67.54 25 6.48 Yes 12 1.23 Yes 0 0 No -24 0.4 No 46 87.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89669794 + NM_000314 PTEN 0 . . . 3 71.22 34 6.63 Yes 60 0.44 No 0 0 No -33 0.38 No 46 49.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68803081 + NM_133509 RAD51B 0 . . . 4.95 82.15 27 5.2 No 7 0.1 No 0 0 No -26 0.49 No 51 43.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41256023 - NM_007294 BRCA1 0 . . . 0.75 74.34 31 6.91 Yes 39 -0.45 No 0 0 No -34 0.65 No 50 52.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37050223 + NM_000249 MLH1 0 . . . 0.34 76.98 15 5 No 65 1.28 Yes 0 0 No -22 0.82 Yes 44 38.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68681016 + NM_133509 RAD51B 0 . . . 0.76 66.91 24 4.87 No 27 -2.36 No 0 0 No -27 0.43 No 45 32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68393125 + NM_133509 RAD51B 0 . . . 2.01 82.49 36 7.1 Yes 1 0.92 Yes 0 0 No -35 0.64 No 50 64.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41196772 - NM_007294 BRCA1 0 . . . 1.69 68.64 21 7.99 Yes 3 0.42 No 0 0 No -21 0.7 Yes 47 73.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59903489 - NM_032043 BRIP1 0 . . . 6.7 87.61 35 12.23 Yes 25 0.58 No 0 0 No -34 0.7 Yes 33 80.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47744290 + NM_000251 MSH2 0 . . . 8.68 84.22 17 4.43 No 63 -2.83 No 0 0 No -26 0.52 No 41 64.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68843828 + NM_133509 RAD51B 0 . . . 2.18 0 19 5.83 Yes 8 0.61 No 0 0 No -20 0.59 No 50 91.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75489545 - NM_001040108 MLH3 0 . . . 3.68 76.59 15 3.38 No -3 1.24 Yes 0 0 No -6 0.28 No 49 43.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37086791 + NM_000249 MLH1 0 . . . 3.09 77.38 68 8.87 Yes 66 0.37 No 0 0 No -28 0.66 No 62 39.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40992873 + NM_001164269 RAD51 0 . . . 0.86 70.41 15 5.92 Yes 75 1.07 Yes 0 0 No -28 0.62 No 42 43.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68951425 + NM_133509 RAD51B 0 . . . 0.89 70.09 19 4.58 No 24 -2.39 No 0 0 No -22 0.41 No 52 60.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69128541 + NM_133509 RAD51B 0 . . . 3.35 74.64 19 5 No 17 1.46 Yes 0 0 No -40 0.54 No 41 91.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68710250 + NM_133509 RAD51B 0 . . . 9.2 87.34 29 5.77 Yes 19 1.32 Yes 0 0 No -33 0.67 Yes 48 91.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108178392 + NM_000051 ATM 0 . . . 1.08 56.83 18 4.99 No 62 1.44 Yes 0 0 No -17 0.32 No 52 67.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68304098 + NM_133509 RAD51B 0 . . . 7.78 81.17 26 5.2 No 15 1.08 Yes 0 0 No -25 0.41 No 43 95.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47752956 + NM_000251 MSH2 0 . . . 3.41 87.28 28 6.1 Yes 64 -2.35 No 0 0 No -32 0.73 Yes 50 27.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108232785 + NM_000051 ATM 0 . . . 1.57 72.13 21 4.94 No -1 0.05 No 0 0 No -27 0.52 No 59 27.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75478613 - NM_001040108 MLH3 0 . . . 4.82 68.88 16 4.52 No 39 1.23 Yes 0 0 No -29 0.63 No 19 31.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94227996 - NM_005591 MRE11 0 . . . 2.2 65.74 30 5.14 No 25 0.49 No 0 0 No -24 0.49 No 47 64.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47789941 + NM_000251 MSH2 0 . . . 7.01 77.91 22 5.29 No 7 1.5 Yes 0 0 No -27 0.57 No 51 89.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32905311 + NM_000059 BRCA2 0 . . . 0.9 76.57 11 4.8 No 5 0.62 No 0 0 No -25 0.31 No 53 42.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32889225 + NM_000059 BRCA2 0 . . . 0.19 62.87 17 5.29 No 48 0.77 No 0 0 No -21 0.6 No 32 44.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47683864 + NM_000251 MSH2 0 . . . 3.15 60.1 27 4.32 No 29 0.34 No 0 0 No -22 0.75 Yes 28 41.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190693895 + NM_000534 PMS1 0 . . . 3.65 72.18 19 5.48 No 40 0.9 Yes 0 0 No -24 0.28 No 39 88.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47665948 + NM_000251 MSH2 0 . . . 4.98 77.78 24 6.46 Yes 54 0.39 No 0 0 No -28 0.41 No 53 48.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89644672 + NM_000314 PTEN 0 . . . 2.86 71.63 27 5.29 No 30 0.47 No 0 0 No -26 0.84 Yes 50 67.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47744653 + NM_000251 MSH2 0 . . . 2.11 80.48 24 5.54 No 71 -4.12 No 0 0 No -30 0.36 No 44 64.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59819562 - NM_032043 BRIP1 0 . . . 4.61 65.32 56 7.83 Yes 10 2.24 Yes 0 0 No -31 0.47 No 48 90.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69034785 + NM_133509 RAD51B 0 . . . 4.28 72.52 47 5.61 Yes 58 -4.19 No 0 0 No -34 0.64 No 48 28.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94182878 - NM_005591 MRE11 0 . . . 1.06 69.01 21 7.74 Yes 62 -2.7 No 0 0 No -29 0.45 No 43 45.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21971568 - NM_000077 CDKN2A 0 . . . 1.76 67.64 19 4.69 No 46 0.59 No 0 0 No -18 0.59 No 43 35.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59757010 - NM_032043 BRIP1 0 . . . 3.41 78.02 16 3.11 No 57 -2.68 No 0 0 No -20 0.55 No 48 51.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90957402 - NM_002485 NBN 0 . . . 2.65 72.54 31 6.08 Yes 67 1.67 Yes 0 0 No -30 0.78 Yes 37 59.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41000545 + NM_001164269 RAD51 0 . . . 2.33 86.9 20 5.1 No 76 1.25 Yes 0 0 No -55 0.35 No 50 76.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68804772 + NM_133509 RAD51B 0 . . . 1.26 63.81 19 4.07 No 0 0.41 No 0 0 No -29 0.37 No 40 70.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32947014 + NM_000059 BRCA2 0 . . . 3.02 80.05 17 6.08 Yes 52 0.14 No 0 0 No -16 0.76 Yes 46 80.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21976277 - NM_000077 CDKN2A 0 . . . 1.08 84.22 16 5.59 Yes 76 0.93 Yes 0 0 No -30 0.82 Yes 51 38.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68391958 + NM_133509 RAD51B 0 . . . 2.63 0 20 5.73 Yes 8 0.12 No 0 0 No -19 0.59 No 50 73.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131918517 + NM_005732 RAD50 0 . . . 6.81 75.03 39 5.8 Yes 33 0.45 No 0 0 No -28 0.41 No 45 59.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69128400 + NM_133509 RAD51B 0 . . . 2.36 77.94 44 5.65 Yes 58 -4.43 No 0 0 No -32 0.59 No 46 59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68861995 + NM_133509 RAD51B 0 . . . 6.15 69.95 32 6.34 Yes 34 0.01 No 0 0 No -37 0.53 No 39 69.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41263670 - NM_007294 BRCA1 0 . . . 4.02 80.12 25 4.64 No 9 1.09 Yes 0 0 No -20 0.43 No 49 86.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68398745 + NM_133509 RAD51B 0 . . . 1.08 68.28 21 4.68 No 46 1.16 Yes 0 0 No -20 0.8 Yes 12 82.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68871112 + NM_004360 CDH1 0 . . . 4.42 84.22 17 4.05 No 8 1.13 Yes 0 0 No -20 0.86 Yes 50 95.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69049188 + NM_133509 RAD51B 0 . . . 2.35 77.27 41 7.39 Yes 47 -3.1 No 0 0 No -27 0.5 No 47 62.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47679008 + NM_000251 MSH2 0 . . . 6.56 84.07 23 4.56 No 7 1.19 Yes 0 0 No -41 0.72 Yes 51 63.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68816267 + NM_133509 RAD51B 0 . . . 3.32 78.97 23 5.46 No 7 1 Yes 0 0 No -26 0.83 Yes 51 85.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47750047 + NM_000251 MSH2 0 . . . 4.86 80.79 12 5 No 25 -1.8 No 0 0 No -26 0.84 Yes 44 57.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23614531 - NM_024675 PALB2 0 . . . 8.36 79.88 29 5.92 Yes 19 0.69 No 0 0 No -28 0.83 Yes 39 62.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108139800 + NM_000051 ATM 0 . . . 3.85 72.43 26 7.06 Yes 45 1.22 Yes 0 0 No -29 0.49 No 33 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59787824 - NM_032043 BRIP1 0 . . . 0.15 75.6 32 5.09 No 21 0.27 No 0 0 No -31 0.68 Yes 47 71.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47659778 + NM_000251 MSH2 0 . . . 3.07 70.86 34 7.71 Yes 29 -3.85 No 0 0 No -33 0.66 No 49 61.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68704380 + NM_133509 RAD51B 0 . . . 8.36 83.34 21 5 No 60 1.04 Yes 0 0 No -18 0.6 No 49 70.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6026520 - NM_000535 PMS2 0 . . . 0.28 0 23 5.35 No -2 0.03 No 0 0 No -25 0.56 No 28 86.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48008438 + NM_000179 MSH6 0 . . . 5.26 81.35 21 3.98 No 26 0.16 No 0 0 No -23 0.74 Yes 50 67.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37048734 + NM_000249 MLH1 0 . . . 4.04 74.06 34 9.21 Yes 13 0.33 No 0 0 No -33 0.88 Yes 45 84.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47792839 + NM_000251 MSH2 0 . . . 4.77 75.64 43 6.82 Yes 0 0.48 No 0 0 No -42 0.9 Yes 44 75.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59854142 - NM_032043 BRIP1 0 . . . 5.72 80.91 14 3.41 No 67 0.72 No 0 0 No -31 0.66 No 50 68.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69118446 + NM_133509 RAD51B 0 . . . 5.89 79.47 12 4.69 No 74 -4.29 No 0 0 No -22 0.21 No 40 64.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108098799 + NM_000051 ATM 0 . . . 3.35 75.54 17 5.39 No 29 0.21 No 0 0 No -22 0.49 No 35 49.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68846397 + NM_133509 RAD51B 0 . . . 3.29 85.32 27 5.21 No 73 -5.39 No 0 0 No -26 0.46 No 50 59.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47733187 + NM_000251 MSH2 0 . . . 5.79 66.28 43 7.15 Yes -2 0.98 Yes 0 0 No -29 0.73 Yes 34 93.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68961507 + NM_133509 RAD51B 0 . . . 6.24 80.92 18 6.53 Yes 8 1.25 Yes 0 0 No -36 0.21 No 50 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68729415 + NM_133509 RAD51B 0 . . . 2.76 72.19 20 6.9 Yes 14 -1.93 No 0 0 No -19 0.52 No 41 42.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68795853 + NM_004360 CDH1 0 . . . 4.66 77.76 24 5.1 No 31 0.4 No 0 0 No -21 0.54 No 45 88.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152368342 - NM_005431 XRCC2 0 . . . 1.12 82.46 28 5.38 No 3 1.22 Yes 0 0 No -27 0.88 Yes 41 95.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69119582 + NM_133509 RAD51B 0 . . . 4.66 79.1 18 4.9 No 7 0.62 No 0 0 No -20 0.31 No 51 78.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68879838 + NM_133509 RAD51B 0 . . . 2.57 84.2 16 3.87 No 53 0.21 No 0 0 No -21 0.42 No 53 35.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68935863 + NM_133509 RAD51B 0 . . . 4.84 67.02 20 5.1 No 69 0.05 No 0 0 No -58 0.5 No 45 92.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68465026 + NM_133509 RAD51B 0 . . . 3.6 64.34 23 3.84 No 73 -5.29 No 0 0 No -22 0.8 Yes 37 28.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68977783 + NM_133509 RAD51B 0 . . . 7.15 80.42 28 6.52 Yes 47 0.21 No 0 0 No -27 0.92 Yes 29 59.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108102812 + NM_000051 ATM 0 . . . 0.2 71.81 22 5.46 No 34 0.02 No 0 0 No -21 0.49 No 44 54.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41225688 - NM_007294 BRCA1 0 . . . 0.04 0 27 5.48 No 52 -4.25 No 0 0 No -27 0.47 No 52 54.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108160638 + NM_000051 ATM 0 . . . 5.85 88.79 17 5.3 No 3 1.55 Yes 0 0 No -30 0.88 Yes 55 48.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7575405 - NM_000546 TP53 0 . . . 4.99 83.92 19 4.69 No 10 1.25 Yes 0 0 No -18 0.91 Yes 48 92.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47708298 + NM_000251 MSH2 0 . . . 0.08 63.43 29 5.56 Yes 40 0.45 No 0 0 No -28 0.74 Yes 47 69.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131950440 + NM_005732 RAD50 0 . . . 2.12 0 18 5.08 No 42 0.52 No 0 0 No -26 0.82 Yes 13 74.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105191022 + NM_021930 RINT1 0 . . . 3.96 0 39 6.44 Yes 15 0.66 No 0 0 No -39 0.58 No 36 77.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48030181 + NM_000179 MSH6 0 . . . 2.22 0 22 4.8 No 15 0.76 No 0 0 No -21 0.96 Yes 38 49.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69089531 + NM_133509 RAD51B 0 . . . 7.9 77.41 24 6.4 Yes 37 0.46 No 0 0 No -23 0.97 Yes 47 74.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23627994 - NM_024675 PALB2 0 . . . 2.72 65.75 16 5.1 No 24 0.99 Yes 0 0 No -29 0.76 Yes 30 71.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89677011 + NM_000314 PTEN 0 . . . 1.05 0 36 4.56 No 24 0.1 No 0 0 No -25 0.62 No 44 62.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105176584 + NM_021930 RINT1 0 . . . 1.54 89.33 37 7.43 Yes 39 1.54 Yes 0 0 No -24 0.38 No 19 65.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68410289 + NM_133509 RAD51B 0 . . . 3.21 75.49 27 5.26 No 32 0.12 No 0 0 No -21 0.71 Yes 43 58.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75512262 - NM_001040108 MLH3 0 . . . 7.4 76 34 7.27 Yes -2 0.05 No 0 0 No -33 0.81 Yes 52 48.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47640674 + NM_000251 MSH2 0 . . . 1.26 76.94 18 4.45 No 29 0.73 No 0 0 No -26 0.67 Yes 29 52.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69130181 + NM_133509 RAD51B 0 . . . 10.03 87.19 20 5.57 Yes 9 1.2 Yes 0 0 No -19 0.6 No 49 90.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47782769 + NM_000251 MSH2 0 . . . 4.93 84.88 14 4.47 No 5 0.85 Yes 0 0 No -21 0.72 Yes 48 29.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69116991 + NM_133509 RAD51B 0 . . . 1.13 66.27 21 5.54 No 53 1.12 Yes 0 0 No -20 0.5 No 39 59.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90987680 - NM_002485 NBN 0 . . . 4.65 80.03 34 4.35 No 3 0.65 No 0 0 No -27 0.56 No 39 75.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69118522 + NM_133509 RAD51B 0 . . . 2.02 63.4 42 4.75 No 45 1.33 Yes 0 0 No -28 0.9 Yes 13 52.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69082315 + NM_133509 RAD51B 0 . . . 3.12 81.44 25 5.39 No 11 1.65 Yes 0 0 No -22 0.75 Yes 47 86.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37064618 + NM_000249 MLH1 0 . . . 0.61 64.99 37 5.9 Yes 31 -4.02 No 0 0 No -28 0.45 No 43 59.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90951475 - NM_002485 NBN 0 . . . 8.16 86.42 12 4.8 No 65 0.78 Yes 0 0 No -38 0.31 No 40 52.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41269655 - NM_007294 BRCA1 0 . . . 1.62 76.85 28 4.68 No 33 0.84 Yes 0 0 No -26 0.6 No 51 40.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37063675 + NM_000249 MLH1 0 . . . 1.69 63.06 33 5.08 No 11 -2.42 No 0 0 No -35 0.41 No 44 56.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68802163 + NM_004360 CDH1 0 . . . 1.36 65.89 19 5.38 No 74 1.55 Yes 0 0 No -18 0.81 Yes 38 34.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190675259 + NM_000534 PMS1 0 . . . 0.7 74.19 28 6.47 Yes 13 0.98 Yes 0 0 No -27 0.75 Yes 45 47.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40998646 + NM_001164269 RAD51 0 . . . 1.47 74.68 61 7.94 Yes 73 0.54 No 0 0 No -27 0.62 No 46 78.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89641587 + NM_000314 PTEN 0 . . . 3 0 35 7.4 Yes 38 -3.3 No 0 0 No -34 0.79 Yes 54 30.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7588021 - NM_000546 TP53 0 . . . 11.08 85.25 27 5.48 No 11 0.3 No 0 0 No -26 0.49 No 47 86.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68540408 + NM_133509 RAD51B 0 . . . 3.2 75.86 25 6.24 Yes 21 1.15 Yes 0 0 No -24 0.51 No 37 71.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48011381 + NM_000179 MSH6 0 . . . 5.28 73.88 36 6.48 Yes 71 -4.85 No 0 0 No -35 0.63 No 47 50.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68525072 + NM_133509 RAD51B 0 . . . 6.9 87.87 23 5 No 60 1.6 Yes 0 0 No -22 0.77 Yes 49 77.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59938419 - NM_032043 BRIP1 0 . . . 4.68 0 21 4.42 No 63 1.57 Yes 0 0 No -18 0.49 No 49 57.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41205885 - NM_007294 BRCA1 0 . . . 1.41 84.22 17 5.46 No 33 1.43 Yes 0 0 No -25 0.6 No 50 69.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68662687 + NM_133509 RAD51B 0 . . . 0.32 74.68 27 8.58 Yes 4 0.1 No 0 0 No -26 0.86 Yes 47 58.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41260957 - NM_007294 BRCA1 0 . . . 0.36 67.75 31 5.06 No 41 -0.37 No 0 0 No -30 0.74 Yes 17 32.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89645955 + NM_000314 PTEN 0 . . . 7.35 76.14 39 6.22 Yes 21 1.14 Yes 0 0 No -25 0.75 Yes 37 83.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23642763 - NM_024675 PALB2 0 . . . 4.05 84.95 27 3.95 No 73 -1.35 No 0 0 No -26 0.39 No 44 55.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215670435 - NM_000465 BARD1 0 . . . 0.22 81.04 49 6.97 Yes 42 0.86 Yes 0 0 No -33 0.76 Yes 44 75.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29090594 - NM_001005735 CHEK2 0 . . . 3.45 72.2 20 5.22 No 5 0.46 No 0 0 No -23 0.66 No 44 62.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68626223 + NM_133509 RAD51B 0 . . . 2.01 74.68 18 5.19 No 65 1.11 Yes 0 0 No -30 0.53 No 47 51.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75493638 - NM_001040108 MLH3 0 . . . 4.1 84.46 20 3.58 No 4 1.04 Yes 0 0 No -22 0.55 No 45 61.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47657031 + NM_000251 MSH2 0 . . . 4.95 77.45 16 5.46 No 76 -5.83 No 0 0 No -46 0.85 Yes 45 96.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90958684 - NM_002485 NBN 0 . . . 5.29 70.36 30 5.69 Yes 8 0.6 No 0 0 No -32 0.36 No 46 74.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68754100 + NM_133509 RAD51B 0 . . . 2.8 70.07 21 5.07 No 9 0.51 No 0 0 No -45 0.56 No 49 71.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68493052 + NM_133509 RAD51B 0 . . . 2.21 68.99 28 5.2 No 67 -4.36 No 0 0 No -25 0.53 No 48 56.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90967414 - NM_002485 NBN 0 . . . 2.82 71.57 16 5.38 No 71 1.1 Yes 0 0 No -54 0.31 No 44 30.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68727928 + NM_133509 RAD51B 0 . . . 2.5 82.13 33 6.08 Yes 19 -1.64 No 0 0 No -30 0.67 Yes 46 56.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68443096 + NM_133509 RAD51B 0 . . . 6 82.43 22 7.53 Yes 3 1.18 Yes 0 0 No -26 0.77 Yes 42 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68470352 + NM_133509 RAD51B 0 . . . 5.79 87.9 20 5.1 No 65 -0.81 No 0 0 No -19 0.67 Yes 53 72.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68643350 + NM_133509 RAD51B 0 . . . 4.6 89.19 19 5 No 63 0.7 No 0 0 No -27 0.25 No 50 73.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215633913 - NM_000465 BARD1 0 . . . 10.22 88.69 28 3.74 No 8 1.14 Yes 0 0 No -24 0.7 Yes 44 81.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68680669 + NM_133509 RAD51B 0 . . . 0.67 75.32 44 5.66 Yes 1 0.94 Yes 0 0 No -43 0.65 No 50 43.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84381711 - NM_139076 FAM175A 0 . . . 2.41 65.56 19 7.07 Yes 23 0.8 Yes 0 0 No -18 0.76 Yes 48 36.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68313645 + NM_133509 RAD51B 0 . . . 2.23 67.71 61 7.04 Yes 45 -1.46 No 0 0 No -28 0.67 Yes 44 59.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47742334 + NM_000251 MSH2 0 . . . 2.28 73.51 22 5.95 Yes 18 0.42 No 0 0 No -21 0.49 No 50 45.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68999505 + NM_133509 RAD51B 0 . . . 2.22 65.89 23 4.8 No 57 1.17 Yes 0 0 No -22 0.82 Yes 53 61.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41260717 - NM_007294 BRCA1 0 . . . 3.01 0 26 5.39 No 38 1.33 Yes 0 0 No -25 0.58 No 34 60.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69068566 + NM_133509 RAD51B 0 . . . 4.31 68.95 22 4.52 No 54 1.79 Yes 0 0 No -52 0.65 No 46 58.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89633582 + NM_000314 PTEN 0 . . . 4.6 82.88 17 8 Yes 39 0.96 Yes 0 0 No -16 0.57 No 50 45.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69136545 + NM_133509 RAD51B 0 . . . 6.36 74.57 31 5.39 No 59 0.01 No 0 0 No -28 0.19 No 43 47.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68388359 + NM_133509 RAD51B 0 . . . 4.18 72.88 39 8.3 Yes 62 -3.31 No 0 0 No -28 0.43 No 42 43.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69038150 + NM_133509 RAD51B 0 . . . 9.85 91.88 60 6.54 Yes 55 -1.04 No 0 0 No -25 0.71 Yes 46 48.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6028381 - NM_000535 PMS2 0 . . . 1.04 77.18 23 4.75 No 22 1.02 Yes 0 0 No -23 0.76 Yes 36 74.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89647083 + NM_000314 PTEN 0 . . . 3.14 71.64 15 4.94 No 47 0.21 No 0 0 No -22 0.44 No 36 37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131949719 + NM_005732 RAD50 0 . . . 1.08 0 20 5.1 No 74 -6.59 No 0 0 No -19 0.62 No 50 45.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75493028 - NM_001040108 MLH3 0 . . . 0.64 77.94 27 5.02 No 49 1.09 Yes 0 0 No -26 0.79 Yes 43 45.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59837641 - NM_032043 BRIP1 0 . . . 3.9 71.75 33 5.74 Yes 27 0.83 Yes 0 0 No -22 0.44 No 43 78.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56813018 + NM_058216 RAD51C 0 . . . 5.14 71.1 38 7.68 Yes 68 0.92 Yes 0 0 No -37 0.65 No 39 63.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68623097 + NM_133509 RAD51B 0 . . . 6.49 82.62 16 4.29 No 29 1.11 Yes 0 0 No -15 0.68 Yes 37 70.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68329928 + NM_133509 RAD51B 0 . . . 6.93 70.99 22 5.72 Yes 60 -1.15 No 0 0 No -21 0.77 Yes 34 55.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69006206 + NM_133509 RAD51B 0 . . . 3.38 78.65 28 6.98 Yes 1 0.05 No 0 0 No -27 0.73 Yes 41 79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68613517 + NM_133509 RAD51B 0 . . . 8.01 86.29 34 4.88 No 2 0.11 No 0 0 No -26 0.58 No 43 93.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190701066 + NM_000534 PMS1 0 . . . 3.02 64 35 6.84 Yes 31 0.5 No 0 0 No -23 0.74 Yes 38 54.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215605033 - NM_000465 BARD1 0 . . . 5.59 76.19 26 5.36 No 36 0.49 No 0 0 No -26 0.41 No 22 19.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1217809 + NM_000455 STK11 0 . . . 6.13 75.94 63 8.11 Yes 7 1.59 Yes 0 0 No -23 0.48 No 51 86.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68493649 + NM_133509 RAD51B 0 . . . 1.25 0 65 7.48 Yes 50 0.67 No 0 0 No -23 0.84 Yes 50 81.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68612478 + NM_133509 RAD51B 0 . . . 1.29 0 15 4.1 No 62 0.85 Yes 0 0 No -30 0.44 No 24 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131897726 + NM_005732 RAD50 0 . . . 2.27 71.09 26 5.26 No 68 1.97 Yes 0 0 No -22 0.45 No 39 89.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59936745 - NM_032043 BRIP1 0 . . . 3.21 79.3 22 5.55 No 52 -3.58 No 0 0 No -26 0.5 No 45 71.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108225121 + NM_000051 ATM 0 . . . 7.49 92.17 31 4.52 No 65 1.94 Yes 0 0 No -23 0.87 Yes 56 53.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108219379 + NM_000051 ATM 0 . . . 0.43 69.87 31 5.47 No 34 0.55 No 0 0 No -30 0.53 No 48 80.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94172538 - NM_005591 MRE11 0 . . . 4.7 81.49 17 6.48 Yes 51 0.95 Yes 0 0 No -16 0.81 Yes 50 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215662977 - NM_000465 BARD1 0 . . . 0.31 0 23 5.37 No 38 0.38 No 0 0 No -26 0.63 No 52 49.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108193708 + NM_000051 ATM 0 . . . 2.15 74.4 20 4.71 No 7 0.76 No 0 0 No -19 0.72 Yes 51 90.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68808254 + NM_133509 RAD51B 0 . . . 1.47 67.68 24 4.42 No 75 0.94 Yes 0 0 No -19 0.58 No 48 46.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68898540 + NM_133509 RAD51B 0 . . . 9.48 81.08 36 6.58 Yes 12 0.55 No 0 0 No -29 0.68 Yes 38 76.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131915471 + NM_005732 RAD50 0 . . . 1.39 63 28 5.01 No 60 0.61 No 0 0 No -27 0.77 Yes 51 61.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47705487 + NM_000251 MSH2 0 . . . 0.45 60.94 17 4.69 No 76 -3.63 No 0 0 No -38 0.59 No 52 37.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152370314 - NM_005431 XRCC2 0 . . . 0.92 76.63 35 6.4 Yes 58 -4.38 No 0 0 No -34 0.62 No 48 42.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21995241 - NM_000077 CDKN2A 0 . . . 1.57 0 10 4.58 No 44 -3.54 No 0 0 No -25 0.9 Yes 44 31.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59830734 - NM_032043 BRIP1 0 . . . 10.07 89.73 30 5.39 No 2 0.86 Yes 0 0 No -29 0.76 Yes 44 45.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131961128 + NM_005732 RAD50 0 . . . 4.35 72.5 18 5.74 Yes 7 0.02 No 0 0 No -26 0.82 Yes 45 39.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47630199 + NM_000251 MSH2 0 . . . 1.93 62.95 29 5.57 Yes 70 -1.2 No 0 0 No -28 0.87 Yes 28 48.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190663526 + NM_000534 PMS1 0 . . . 7.27 76.62 23 6.07 Yes 32 0.69 No 0 0 No -30 0.57 No 26 80.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190651818 + NM_000534 PMS1 0 . . . 1.02 76.87 21 5.19 No 32 0.67 No 0 0 No -20 0.45 No 53 18.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84395360 - NM_139076 FAM175A 0 . . . 0.53 59.98 19 5.48 No -4 0.38 No 0 0 No -18 0.46 No 62 26.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1210099 + NM_000455 STK11 0 . . . 4.52 81.2 15 4.52 No 41 0.85 Yes 0 0 No -26 0.66 No 47 60.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190723460 + NM_000534 PMS1 0 . . . 5.26 79.07 15 4.87 No 48 0.18 No 0 0 No -21 0.35 No 45 73.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41004867 + NM_001164269 RAD51 0 . . . 6.86 72.92 20 5.08 No -1 0.6 No 0 0 No -23 0.6 No 45 80.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68995566 + NM_133509 RAD51B 0 . . . 2.62 0 34 7.61 Yes 2 0.62 No 0 0 No -33 0.48 No 41 78.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68638852 + NM_133509 RAD51B 0 . . . 3.41 71.14 32 4.79 No 17 0.61 No 0 0 No -31 0.81 Yes 41 59.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460356 + NM_133509 RAD51B 0 . . . 6.53 72.02 18 4.69 No 39 -2.56 No 0 0 No -17 0.55 No 37 80.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68772393 + NM_133509 RAD51B 0 . . . 3.17 68.2 50 7.05 Yes 22 0.5 No 0 0 No -30 0.68 Yes 45 71.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33440637 - NM_002878 RAD51D 0 . . . 4.66 87.37 21 4.8 No 10 1.22 Yes 0 0 No -21 0.57 No 48 87.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68828757 + NM_133509 RAD51B 0 . . . 2.9 78.21 31 6.48 Yes 14 0.59 No 0 0 No -30 0.82 Yes 44 56.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68993703 + NM_133509 RAD51B 0 . . . 2.19 73.66 37 6.22 Yes 63 0.8 Yes 0 0 No -23 0.66 No 38 65.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94217972 - NM_005591 MRE11 0 . . . 0.44 69.65 26 5.19 No 53 0.61 No 0 0 No -25 0.94 Yes 23 77.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1214554 + NM_000455 STK11 0 . . . 1.54 77.74 20 5.61 Yes 60 0.28 No 0 0 No -19 0.69 Yes 46 92.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68825615 + NM_133509 RAD51B 0 . . . 0.15 74.27 9 5 No 25 -3.35 No 0 0 No -26 0.57 No 64 40.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37062796 + NM_000249 MLH1 0 . . . 0.56 75.64 14 4.6 No 44 0.45 No 0 0 No -25 0.5 No 26 73.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29096234 - NM_001005735 CHEK2 0 . . . 1.67 66.07 12 5.78 Yes 63 -5.31 No 0 0 No -30 0.48 No 43 66.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152353929 - NM_005431 XRCC2 0 . . . 0.43 0 21 6 Yes 68 0.45 No 0 0 No -38 0.77 Yes 49 67.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48030400 + NM_000179 MSH6 0 . . . 4.31 83.43 21 5.66 Yes 49 0.6 No 0 0 No -20 0.77 Yes 41 74.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69066108 + NM_133509 RAD51B 0 . . . 10.27 80.26 28 3.6 No 69 -0.33 No 0 0 No -24 0.37 No 47 35.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32944383 + NM_000059 BRCA2 0 . . . 6.43 85.44 43 6.12 Yes 0 0.53 No 0 0 No -29 0.35 No 41 84.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47781165 + NM_000251 MSH2 0 . . . 0.11 75.61 23 3.96 No 47 0.44 No 0 0 No -22 0.56 No 50 48.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89629456 + NM_000314 PTEN 0 . . . 0.93 65.9 21 5.66 Yes 54 -2.33 No 0 0 No -20 0.77 Yes 37 17.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215628394 - NM_000465 BARD1 0 . . . 7.24 81.68 22 6.15 Yes 32 1.06 Yes 0 0 No -21 0.71 Yes 26 85.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52438241 - NM_004656 BAP1 0 . . . 1.19 69.88 18 4.42 No 67 0.91 Yes 0 0 No -17 0.87 Yes 50 82.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90992144 - NM_002485 NBN 0 . . . 0.61 0 17 5.24 No 19 -1.94 No 0 0 No -16 0.74 Yes 52 48.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7572618 - NM_000546 TP53 0 . . . 2.37 0 31 5.5 No 19 -2.74 No 0 0 No -28 0.67 Yes 51 57.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68462155 + NM_133509 RAD51B 0 . . . 2.1 68.89 22 4.75 No 43 -3.55 No 0 0 No -21 0.56 No 18 57.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37088407 + NM_000249 MLH1 0 . . . 4.66 73.1 42 6.67 Yes 71 0.85 Yes 0 0 No -32 0.81 Yes 48 80.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48031467 + NM_000179 MSH6 0 . . . 8.82 87.81 41 6.48 Yes 40 0.5 No 0 0 No -35 0.54 No 37 65.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108117194 + NM_000051 ATM 0 . . . 5.84 70.38 18 5.39 No 13 0.35 No 0 0 No -17 0.65 No 45 75.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59933364 - NM_032043 BRIP1 0 . . . 9.57 88.33 39 5.7 Yes 30 1.19 Yes 0 0 No -38 0.44 No 39 73.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48013655 + NM_000179 MSH6 0 . . . 2.99 85.02 36 7 Yes 4 0.99 Yes 0 0 No -24 0.62 No 54 64.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68595163 + NM_133509 RAD51B 0 . . . 0.81 76.51 21 4.8 No 57 0.65 No 0 0 No -18 0.53 No 47 67.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108171265 + NM_000051 ATM 0 . . . 0.92 67.5 26 6.29 Yes 71 0.49 No 0 0 No -26 0.39 No 49 57.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68382983 + NM_133509 RAD51B 0 . . . 3.94 69.35 20 6.08 Yes 15 1.59 Yes 0 0 No -19 0.67 Yes 43 87.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41279355 - NM_007294 BRCA1 0 . . . 0.27 60.69 18 3.87 No 68 -5.79 No 0 0 No -24 0.19 No 46 90.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90956360 - NM_002485 NBN 0 . . . 2.48 79.18 33 5.79 Yes 4 1.12 Yes 0 0 No -32 0.63 No 39 84.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68854819 + NM_004360 CDH1 0 . . . 0.6 80.49 24 6.27 Yes 71 -4.82 No 0 0 No -20 0.39 No 47 41.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32926146 + NM_000059 BRCA2 0 . . . 0.63 72.26 28 5.83 Yes 30 1.22 Yes 0 0 No -23 0.62 No 28 81.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68618435 + NM_133509 RAD51B 0 . . . 5.16 83.69 16 5.39 No 32 1.46 Yes 0 0 No -26 0.76 Yes 48 52.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68579475 + NM_133509 RAD51B 0 . . . 3.18 65.47 19 4.74 No 26 0.62 No 0 0 No -23 0.74 Yes 41 50.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68924908 + NM_133509 RAD51B 0 . . . 3.71 0 18 4.15 No 30 0.64 No 0 0 No -25 0.82 Yes 28 77.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68351674 + NM_133509 RAD51B 0 . . . 2.36 74.63 52 6.27 Yes -3 0.82 Yes 0 0 No -47 0.46 No 52 63.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68378074 + NM_133509 RAD51B 0 . . . 5.32 78.21 13 4.16 No 62 0.05 No 0 0 No -31 0.33 No 44 74.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37054276 + NM_000249 MLH1 0 . . . 5.97 87.88 25 5.38 No 4 1.81 Yes 0 0 No -24 0.71 Yes 46 60.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90986435 - NM_002485 NBN 0 . . . 6.65 83.18 28 5.38 No 62 -5.33 No 0 0 No -27 0.87 Yes 45 47.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47703422 + NM_000251 MSH2 0 . . . 1.65 70.99 17 5.57 Yes 68 1.71 Yes 0 0 No -16 0.43 No 48 28.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68859787 + NM_133509 RAD51B 0 . . . 6.76 90.17 100 11.14 Yes 5 1.52 Yes 0 0 No -32 0.89 Yes 49 56.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69017682 + NM_133509 RAD51B 0 . . . 0.55 70.53 68 8.08 Yes 74 -6.89 No 0 0 No -32 0.59 No 50 38.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68917751 + NM_133509 RAD51B 0 . . . 1.64 69.79 26 5.1 No -4 0.29 No 0 0 No -25 0.85 Yes 43 69.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59769166 - NM_032043 BRIP1 0 . . . 8.21 86.42 29 5.74 Yes 43 0.98 Yes 0 0 No -28 0.94 Yes 48 86.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47724796 + NM_000251 MSH2 0 . . . 2.32 84.22 11 5.38 No 33 1.14 Yes 0 0 No -27 0.48 No 50 33.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37079457 + NM_000249 MLH1 0 . . . 1.51 72.43 30 6.71 Yes 74 1 Yes 0 0 No -29 0.9 Yes 48 48.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68362686 + NM_133509 RAD51B 0 . . . 6.69 79.61 13 5.75 Yes 58 0.77 Yes 0 0 No -27 0.56 No 51 85.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190663593 + NM_000534 PMS1 0 . . . 4.68 76.63 20 4.8 No 45 0.37 No 0 0 No -22 0.54 No 43 73.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69138500 + NM_133509 RAD51B 0 . . . 3.83 74.92 45 6.29 Yes 50 2.31 Yes 0 0 No -30 0.52 No 18 30.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59871381 - NM_032043 BRIP1 0 . . . 1.87 71.98 19 5.57 Yes 68 1.36 Yes 0 0 No -25 0.73 Yes 55 39.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108240422 + NM_000051 ATM 0 . . . 2.08 78.73 21 5.83 Yes 40 0.58 No 0 0 No -20 0.78 Yes 47 64.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59910864 - NM_032043 BRIP1 0 . . . 3.93 85.51 21 5.02 No 8 1.25 Yes 0 0 No -20 0.44 No 50 88.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108126789 + NM_000051 ATM 0 . . . 1.2 0 11 5.06 No -3 1.01 Yes 0 0 No -28 0.74 Yes 49 51.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37075691 + NM_000249 MLH1 0 . . . 4.29 79.86 10 5.32 No 24 0.98 Yes 0 0 No -24 0.6 No 34 81.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29102563 - NM_001005735 CHEK2 0 . . . 0.85 74.47 25 7.56 Yes 67 0.56 No 0 0 No -31 0.3 No 54 55.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215635300 - NM_000465 BARD1 0 . . . 0.32 66.86 31 5.41 No 26 -3.67 No 0 0 No -26 0.81 Yes 46 51.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33424982 - NM_002878 RAD51D 0 . . . 3.73 0 20 7.14 Yes NA NA NA 0 0 No -19 0.46 No 48 24.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1222683 + NM_000455 STK11 0 . . . 0.75 0 39 5.48 No 62 -1.4 No 0 0 No -38 0.63 No 58 63.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41197986 - NM_007294 BRCA1 0 . . . 3.24 70.06 25 6.39 Yes 66 -4.9 No 0 0 No -24 0.67 Yes 43 28.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190721787 + NM_000534 PMS1 0 . . . 2.98 74.37 14 4.47 No 21 0.95 Yes 0 0 No -36 0.78 Yes 37 93.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68664299 + NM_133509 RAD51B 0 . . . 1.02 68.84 20 5.54 No 72 0.14 No 0 0 No -24 0.37 No 43 45.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69092214 + NM_133509 RAD51B 0 . . . 6.54 87.02 43 6.82 Yes -3 -1.61 No 0 0 No -21 0.65 No 44 76.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68454713 + NM_133509 RAD51B 0 . . . 3.28 77.19 31 6.16 Yes 53 1.07 Yes 0 0 No -30 0.47 No 49 61.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68956415 + NM_133509 RAD51B 0 . . . 4.44 0 15 4.47 No 53 0.03 No 0 0 No -32 0.26 No 13 49.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21973351 - NM_000077 CDKN2A 0 . . . 6.73 75.15 29 6.16 Yes 68 -6.19 No 0 0 No -28 0.53 No 48 77.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32967485 + NM_000059 BRCA2 0 . . . 0.78 68.03 42 7.55 Yes 40 1.04 Yes 0 0 No -35 0.56 No 18 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68865247 + NM_133509 RAD51B 0 . . . 0.72 62.14 21 4.92 No 68 -5.02 No 0 0 No -20 0.48 No 48 38.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68718693 + NM_133509 RAD51B 0 . . . 1.44 72.29 22 5.29 No 27 1.63 Yes 0 0 No -21 0.43 No 31 50.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69047034 + NM_133509 RAD51B 0 . . . 4.34 75.54 30 5.66 Yes 74 0.22 No 0 0 No -29 0.83 Yes 46 64.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90974835 - NM_002485 NBN 0 . . . 3.71 71.74 20 4.87 No 9 0.7 No 0 0 No -25 0.67 Yes 45 60.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68421394 + NM_133509 RAD51B 0 . . . 1.78 81.41 28 5.28 No 69 -3.48 No 0 0 No -31 0.69 Yes 50 81.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68348576 + NM_133509 RAD51B 0 . . . 3.21 91.45 23 4 No 35 0.72 No 0 0 No -31 0.83 Yes 23 64.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32954722 + NM_000059 BRCA2 0 . . . 2.71 84.79 22 5.01 No 2 1.51 Yes 0 0 No -27 0.29 No 16 63.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21972170 - NM_000077 CDKN2A 0 . . . 4.47 83.43 20 5.15 No 16 0.64 No 0 0 No -23 0.31 No 46 56.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68620648 + NM_133509 RAD51B 0 . . . 5.31 71.62 19 4.49 No 23 1.02 Yes 0 0 No -58 0.74 Yes 35 70.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68371651 + NM_133509 RAD51B 0 . . . 1.06 79.09 16 4.69 No 25 1.09 Yes 0 0 No -24 0.68 Yes 50 53.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68636307 + NM_133509 RAD51B 0 . . . 4.51 79.9 28 5.35 No 2 1.53 Yes 0 0 No -27 0.74 Yes 46 58.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69051539 + NM_133509 RAD51B 0 . . . 5.4 75.35 18 4.9 No 22 0.49 No 0 0 No -41 0.86 Yes 36 70.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68976702 + NM_133509 RAD51B 0 . . . 4.64 72.44 22 5.14 No 11 0.79 Yes 0 0 No -21 0.73 Yes 47 74.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152364545 - NM_005431 XRCC2 0 . . . 2.48 75.16 19 5.07 No 48 1.34 Yes 0 0 No -25 0.37 No 41 60.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69065925 + NM_133509 RAD51B 0 . . . 5.22 71.86 25 5.57 Yes 37 -2.01 No 0 0 No -24 0.35 No 49 74.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68972935 + NM_133509 RAD51B 0 . . . 4.93 0 49 6.81 Yes 9 1.09 Yes 0 0 No -29 0.7 Yes 49 65.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47629909 + NM_000251 MSH2 0 . . . 7.96 82.08 18 4.83 No 38 -2.29 No 0 0 No -17 0.44 No 49 60.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646109 + NM_133509 RAD51B 0 . . . 4.86 71.37 20 7.14 Yes 12 0.45 No 0 0 No -19 0.44 No 40 61.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344798 + NM_133509 RAD51B 0 . . . 4.98 80.72 16 5.48 No 48 0.62 No 0 0 No -46 0.4 No 50 96.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69011425 + NM_133509 RAD51B 0 . . . 1.02 61.9 29 5.56 Yes 47 -3.31 No 0 0 No -28 0.64 No 50 28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190655349 + NM_000534 PMS1 0 . . . 4.63 82.55 16 4.46 No 45 1.06 Yes 0 0 No -32 0.56 No 46 57.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59902016 - NM_032043 BRIP1 0 . . . 3.34 78.68 28 5.29 No 70 0.6 No 0 0 No -55 0.57 No 51 71.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94168058 - NM_005591 MRE11 0 . . . 1.37 0 54 7.16 Yes 36 0.74 No 0 0 No -30 0.58 No 34 68.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23647179 - NM_024675 PALB2 0 . . . 3.83 69.65 23 4.9 No 76 -5.52 No 0 0 No -22 0.96 Yes 48 74.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68395574 + NM_133509 RAD51B 0 . . . 7.02 87.64 50 8.11 Yes 0 1.03 Yes 0 0 No -24 0.82 Yes 42 55.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47628625 + NM_000251 MSH2 0 . . . 5.92 82.31 21 5.09 No 61 1.14 Yes 0 0 No -20 0.7 Yes 39 59.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68560999 + NM_133509 RAD51B 0 . . . 5.83 82.59 28 5.83 Yes 7 2.18 Yes 0 0 No -27 0.95 Yes 43 66.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59904744 - NM_032043 BRIP1 0 . . . 6.01 80.95 22 4.4 No 69 0.89 Yes 0 0 No -22 0.75 Yes 49 83.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47668494 + NM_000251 MSH2 0 . . . 0.48 83.32 15 4.2 No 62 0.97 Yes 0 0 No -46 0.29 No 30 69.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89674518 + NM_000314 PTEN 0 . . . 3.17 72.97 28 5.37 No 6 1.52 Yes 0 0 No -42 0.56 No 42 66.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108238257 + NM_000051 ATM 0 . . . 3.58 62.59 34 7.58 Yes 1 0.88 Yes 0 0 No -33 0.67 Yes 48 36.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68815110 + NM_004360 CDH1 0 . . . 9.75 97.73 20 5.66 Yes 5 1.56 Yes 0 0 No -19 0.64 No 39 89.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32905490 + NM_000059 BRCA2 0 . . . 6.47 82.61 22 5.8 Yes 40 1.29 Yes 0 0 No -21 0.85 Yes 45 64.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69116276 + NM_133509 RAD51B 0 . . . 6.38 0 24 5.1 No 46 0.91 Yes 0 0 No -23 0.66 No 42 77.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32888355 + NM_000059 BRCA2 0 . . . 3.57 72.2 41 6.51 Yes 39 0.3 No 0 0 No -28 0.49 No 45 71.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215629943 - NM_000465 BARD1 0 . . . 2.94 85.14 15 6.1 Yes 72 0.46 No 0 0 No -26 0.8 Yes 51 55.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40991604 + NM_001164269 RAD51 0 . . . 4.92 70.85 18 4.86 No 23 1.63 Yes 0 0 No -17 0.61 No 40 75.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59905705 - NM_032043 BRIP1 0 . . . 5.82 77.78 48 7.35 Yes 73 0.4 No 0 0 No -33 0.34 No 28 43.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215664117 - NM_000465 BARD1 0 . . . 8.02 87.15 23 5 No 8 0.37 No 0 0 No -22 0.62 No 50 57.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47785568 + NM_000251 MSH2 0 . . . 1.62 72.25 18 4.9 No 63 1.43 Yes 0 0 No -26 0.42 No 45 53.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37051484 + NM_000249 MLH1 0 . . . 5.27 87 17 4.8 No 62 -0.66 No 0 0 No -24 0.74 Yes 43 74.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68404201 + NM_133509 RAD51B 0 . . . 1.1 78.79 31 4.2 No 31 0.9 Yes 0 0 No -30 0.59 No 49 43.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68799503 + NM_133509 RAD51B 0 . . . 1.1 0 18 4.34 No 19 0.19 No 0 0 No -17 0.76 Yes 42 45.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59829898 - NM_032043 BRIP1 0 . . . 9.59 87.06 9 5.83 Yes 18 0.81 Yes 0 0 No -27 0.83 Yes 40 82.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59876173 - NM_032043 BRIP1 0 . . . 0.44 65.22 21 5.04 No 55 0.55 No 0 0 No -45 0.46 No 48 18.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47694452 + NM_000251 MSH2 0 . . . 1.48 70.46 24 7.27 Yes 52 1.16 Yes 0 0 No -20 0.49 No 48 79.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190693573 + NM_000534 PMS1 0 . . . 2.66 69.31 28 6.16 Yes 0 0.43 No 0 0 No -24 0.7 Yes 45 73.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68493190 + NM_133509 RAD51B 0 . . . 8.42 82.49 15 4.58 No 41 0.95 Yes 0 0 No -32 0.72 Yes 46 62.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47764268 + NM_000251 MSH2 0 . . . 2.27 82.91 27 5.1 No 57 0.27 No 0 0 No -19 0.66 Yes 43 26.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59836552 - NM_032043 BRIP1 0 . . . 4.89 68.88 18 4.9 No 68 1.45 Yes 0 0 No -25 0.74 Yes 42 95.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69141981 + NM_133509 RAD51B 0 . . . 2.02 61.97 34 5.99 Yes 60 -4.86 No 0 0 No -33 0.84 Yes 54 22.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69128500 + NM_133509 RAD51B 0 . . . 2.26 67.3 15 4.58 No 76 -1.1 No 0 0 No -17 0.81 Yes 43 40.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59914794 - NM_032043 BRIP1 0 . . . 0.12 63.51 50 6.65 Yes 75 -3.99 No 0 0 No -49 0.37 No 41 51.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108239565 + NM_000051 ATM 0 . . . 4.15 71.27 26 5.29 No 71 0.08 No 0 0 No -25 0.87 Yes 37 67.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108155805 + NM_000051 ATM 0 . . . 0.67 84.22 22 3.7 No 29 1.2 Yes 0 0 No -34 0.56 No 50 55.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68503404 + NM_133509 RAD51B 0 . . . 4.08 71.48 31 5.64 Yes 63 0.26 No 0 0 No -25 0.43 No 41 55.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40994559 + NM_001164269 RAD51 0 . . . 4.01 81.43 16 4.69 No 29 1.76 Yes 0 0 No -15 0.41 No 29 97.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68903114 + NM_133509 RAD51B 0 . . . 2.98 86.05 27 6.54 Yes 35 1.06 Yes 0 0 No -26 0.91 Yes 41 77.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190652289 + NM_000534 PMS1 0 . . . 4.25 68.66 27 6.23 Yes 57 0.39 No 0 0 No -26 0.9 Yes 47 51.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190650257 + NM_000534 PMS1 0 . . . 2.52 84.46 24 6.6 Yes 34 0.22 No 0 0 No -23 0.88 Yes 51 64.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47709596 + NM_000251 MSH2 0 . . . 6.76 89.35 22 4.51 No 6 1.59 Yes 0 0 No -22 0.84 Yes 52 53.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90945974 - NM_002485 NBN 0 . . . 1.82 68.38 19 5 No 38 1.43 Yes 0 0 No -18 0.7 Yes 46 55.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94162178 - NM_005591 MRE11 0 . . . 7.04 84.98 23 3.47 No 27 1.35 Yes 0 0 No -49 0.43 No 43 55.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68898257 + NM_133509 RAD51B 0 . . . 3.32 86.42 19 5 No 25 0.53 No 0 0 No -40 0.93 Yes 48 63.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68535592 + NM_133509 RAD51B 0 . . . 0.65 64.48 40 6.15 Yes 58 0.55 No 0 0 No -26 0.66 Yes 45 32.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41271168 - NM_007294 BRCA1 0 . . . 1.77 70.85 36 6.14 Yes 17 0.88 Yes 0 0 No -35 0.38 No 52 63.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47730825 + NM_000251 MSH2 0 . . . 0.91 0 19 5.22 No 30 -0.59 No 0 0 No -27 0.8 Yes 54 93.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68341583 + NM_133509 RAD51B 0 . . . 4 71.81 55 5.39 No 55 -4.61 No 0 0 No -28 0.74 Yes 49 63.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1221339 + NM_000455 STK11 0 . . . 3.99 69.91 15 4.58 No 0 1.15 Yes 0 0 No -32 0.62 No 58 42.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105174023 + NM_021930 RINT1 0 . . . 3.24 65.98 11 4.12 No 69 0.87 Yes 0 0 No -33 0.7 Yes 34 77.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68817006 + NM_004360 CDH1 0 . . . 2.92 75.53 17 5.7 Yes 27 1.21 Yes 0 0 No -26 0.37 No 31 74.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68288369 + NM_133509 RAD51B 0 . . . 1.57 0 24 5.43 No 71 1.11 Yes 0 0 No -23 0.8 Yes 44 90.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94215798 - NM_005591 MRE11 0 . . . 3.65 92.09 30 5.48 No 69 0.76 No 0 0 No -27 0.54 No 46 77.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68354166 + NM_133509 RAD51B 0 . . . 4 69.13 16 5 No 49 0.87 Yes 0 0 No -25 0.61 No 48 59.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68802030 + NM_004360 CDH1 0 . . . 3.48 82.94 17 7 Yes 3 1.01 Yes 0 0 No -28 0.42 No 55 48.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68693984 + NM_133509 RAD51B 0 . . . 1.58 0 23 3.41 No 73 0.53 No 0 0 No -52 0.48 No 33 87.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215601254 - NM_000465 BARD1 0 . . . 3.06 66.99 25 5.02 No 76 0.81 Yes 0 0 No -24 0.76 Yes 45 36.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68899431 + NM_133509 RAD51B 0 . . . 4.12 71.85 29 5.56 Yes 9 1.28 Yes 0 0 No -28 0.7 Yes 39 89.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68713184 + NM_133509 RAD51B 0 . . . 2.52 71.29 20 5.92 Yes 27 0.71 No 0 0 No -19 0.62 No 15 37.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75498680 - NM_001040108 MLH3 0 . . . 8.37 85.81 21 5.56 Yes 8 0.95 Yes 0 0 No -23 0.79 Yes 50 51.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68406471 + NM_133509 RAD51B 0 . . . 8.83 90.98 50 6.4 Yes 20 0.74 No 0 0 No -26 0.49 No 38 85.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89729716 + NM_000314 PTEN 0 . . . 1.08 64.81 22 4.64 No 76 -2.81 No 0 0 No -24 0.8 Yes 52 87.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68373356 + NM_133509 RAD51B 0 . . . 8.56 99.17 29 4.53 No 70 0.46 No 0 0 No -28 0.5 No 44 70.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68316403 + NM_133509 RAD51B 0 . . . 3.65 71.98 22 4.49 No 74 1.01 Yes 0 0 No -41 0.68 Yes 45 56.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21988747 - NM_000077 CDKN2A 0 . . . 8.04 79.26 23 5.39 No 1 0.17 No 0 0 No -22 0.8 Yes 47 52.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68938056 + NM_133509 RAD51B 0 . . . 1.69 67.38 27 5.2 No 11 1.19 Yes 0 0 No -26 0.67 Yes 47 91.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32911743 + NM_000059 BRCA2 0 . . . 1.04 57.03 23 4.69 No 1 0.18 No 0 0 No -40 0.5 No 46 28.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41016794 + NM_001164269 RAD51 0 . . . 4.91 88.71 18 4.9 No 48 1.49 Yes 0 0 No -21 0.46 No 50 94.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69068806 + NM_133509 RAD51B 0 . . . 3.25 67.33 25 5.39 No 2 0.32 No 0 0 No -22 0.78 Yes 41 59.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68801667 + NM_004360 CDH1 0 . . . 1.86 0 19 4.69 No 73 0.62 No 0 0 No -18 0.84 Yes 42 78.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47680439 + NM_000251 MSH2 0 . . . 2.05 75.26 37 6.52 Yes 65 -5.48 No 0 0 No -22 0.67 Yes 52 42.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137798 + NM_133509 RAD51B 0 . . . 4.28 0 23 4.68 No 5 1.61 Yes 0 0 No -22 0.87 Yes 53 86.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68835109 + NM_004360 CDH1 0 . . . 7.95 88.87 23 5.15 No 9 0.94 Yes 0 0 No -22 0.65 No 49 89.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59901899 - NM_032043 BRIP1 0 . . . 3.97 71.85 11 4.8 No 25 0.13 No 0 0 No -54 0.38 No 33 69.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215648280 - NM_000465 BARD1 0 . . . 7.77 79.43 22 5.21 No 24 2.06 Yes 0 0 No -21 0.52 No 34 88.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105197175 + NM_021930 RINT1 0 . . . 2.79 75.42 17 4.43 No 55 2.28 Yes 0 0 No -23 0.55 No 49 71.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29113282 - NM_001005735 CHEK2 0 . . . 2.71 66.46 24 5.9 Yes 16 1.19 Yes 0 0 No -23 0.83 Yes 42 85.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68545452 + NM_133509 RAD51B 0 . . . 5.81 69.17 11 4.12 No -2 0.5 No 0 0 No -39 0.35 No 29 36.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68399882 + NM_133509 RAD51B 0 . . . 7.11 77.73 29 5.39 No 24 -0.66 No 0 0 No -28 0.51 No 43 68.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215640631 - NM_000465 BARD1 0 . . . 2.81 71.79 17 4.47 No 59 0.33 No 0 0 No -16 0.67 Yes 37 74.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59901020 - NM_032043 BRIP1 0 . . . 1.65 73.77 29 6.17 Yes 64 0.75 No 0 0 No -28 0.52 No 49 61.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68501946 + NM_133509 RAD51B 0 . . . 1.44 53.41 27 5.48 No 27 2.21 Yes 0 0 No -29 0.69 Yes 31 94.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7568338 - NM_000546 TP53 0 . . . 7.6 77.83 19 4.88 No 60 -4.54 No 0 0 No -18 0.46 No 40 41.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59789202 - NM_032043 BRIP1 0 . . . 6.61 90.14 15 4.58 No 60 0.6 No 0 0 No -57 0.43 No 46 65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68699731 + NM_133509 RAD51B 0 . . . 4.24 80.81 18 5.38 No 74 -6.48 No 0 0 No -60 0.7 Yes 54 36.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190687652 + NM_000534 PMS1 0 . . . 5.65 91.76 26 4.59 No 38 1.03 Yes 0 0 No -25 0.88 Yes 46 53.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68775491 + NM_133509 RAD51B 0 . . . 6.66 93.42 26 5.62 Yes 58 -4.13 No 0 0 No -25 0.75 Yes 46 95.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94181662 - NM_005591 MRE11 0 . . . 1.12 81.72 14 3.87 No 47 0.99 Yes 0 0 No -45 0.28 No 51 46.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68584541 + NM_133509 RAD51B 0 . . . 4.63 75.61 66 7.56 Yes 50 0.44 No 0 0 No -24 0.49 No 46 66.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90976996 - NM_002485 NBN 0 . . . 6.4 64.28 31 4.64 No 49 0.23 No 0 0 No -25 0.54 No 45 73.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90960810 - NM_002485 NBN 0 . . . 1.8 72.85 28 5.38 No 23 0.38 No 0 0 No -27 0.49 No 35 85.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69035086 + NM_133509 RAD51B 0 . . . 2.58 75.85 13 5.53 No 56 -4.23 No 0 0 No -25 0.54 No 43 69.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89726227 + NM_000314 PTEN 0 . . . 5.37 75.56 15 5.29 No 4 0.82 Yes 0 0 No -27 0.35 No 49 32.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37064366 + NM_000249 MLH1 0 . . . 1.6 0 27 5.48 No 4 1.52 Yes 0 0 No -26 0.9 Yes 54 53.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47706079 + NM_000251 MSH2 0 . . . 0.7 73.67 17 5.57 Yes 33 1.16 Yes 0 0 No -16 0.59 No 25 49.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21969114 - NM_000077 CDKN2A 0 . . . 1.18 60.79 19 4.46 No 64 0.64 No 0 0 No -18 0.88 Yes 36 38.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68793096 + NM_004360 CDH1 0 . . . 0.73 81.72 13 5.48 No 45 1.44 Yes 0 0 No -32 0.46 No 36 65.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108172394 + NM_000051 ATM 0 . . . 0.44 0 9 3.87 No 67 -3.38 No 0 0 No -37 0.43 No 24 80.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32949392 + NM_000059 BRCA2 0 . . . 3.07 75.89 31 6.93 Yes 7 0.14 No 0 0 No -28 0.6 No 48 55.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68577549 + NM_133509 RAD51B 0 . . . 6.56 78.98 28 3.69 No 54 -4.48 No 0 0 No -27 0.73 Yes 39 66.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56812365 + NM_058216 RAD51C 0 . . . 3.82 0 22 5.82 Yes 58 0.69 No 0 0 No -28 0.38 No 43 83.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29129046 - NM_001005735 CHEK2 0 . . . 0.09 74.68 32 4.89 No 4 0.41 No 0 0 No -31 0.52 No 54 78.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47643379 + NM_000251 MSH2 0 . . . 4.3 74.34 33 5.65 Yes 37 -1.13 No 0 0 No -25 0.59 No 43 56.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640804 + NM_000251 MSH2 0 . . . 2.21 71.98 37 6.99 Yes 21 0.24 No 0 0 No -36 0.47 No 47 73.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69092801 + NM_133509 RAD51B 0 . . . 3.72 66.14 19 6.69 Yes 15 0.01 No 0 0 No -18 0.66 No 36 63.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68759190 + NM_133509 RAD51B 0 . . . 7.34 72.78 25 5.11 No 22 0.48 No 0 0 No -29 0.83 Yes 37 54.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68791148 + NM_133509 RAD51B 0 . . . 1.62 0 29 6.37 Yes 11 0.39 No 0 0 No -39 0.43 No 44 36.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6044021 - NM_000535 PMS2 0 . . . 3 79.61 18 4.23 No 7 0.38 No 0 0 No -26 0.68 Yes 38 69.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68802745 + NM_133509 RAD51B 0 . . . 0.55 66.55 37 6.94 Yes 75 -2.59 No 0 0 No -36 0.65 No 49 70.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90976606 - NM_002485 NBN 0 . . . 1.08 71.8 13 4.36 No 72 0.85 Yes 0 0 No -26 0.33 No 45 74.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59910349 - NM_032043 BRIP1 0 . . . 2.58 64 48 7.01 Yes 63 1.01 Yes 0 0 No -16 0.54 No 44 50.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68890114 + NM_133509 RAD51B 0 . . . 2.03 79.65 26 3.54 No 28 0.79 Yes 0 0 No -23 0.79 Yes 47 94.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69007014 + NM_133509 RAD51B 0 . . . 2.26 77.06 49 6.93 Yes 37 0.91 Yes 0 0 No -41 0.38 No 50 27.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47664706 + NM_000251 MSH2 0 . . . 1.62 73.38 27 5.55 No 38 0.35 No 0 0 No -26 0.87 Yes 17 71.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68845728 + NM_133509 RAD51B 0 . . . 6.19 80.47 47 7.1 Yes 35 1.12 Yes 0 0 No -35 0.48 No 44 53.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59850802 - NM_032043 BRIP1 0 . . . 6.96 86.96 16 4.69 No 32 0.26 No 0 0 No -15 0.54 No 51 68.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69141543 + NM_133509 RAD51B 0 . . . 7.53 81.96 18 5.14 No 16 0.74 No 0 0 No -17 0.38 No 41 59.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1204872 + NM_000455 STK11 0 . . . 3.22 85.09 27 5.28 No 33 1.5 Yes 0 0 No -26 0.78 Yes 25 66.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68995004 + NM_133509 RAD51B 0 . . . 7.95 93.18 34 6.3 Yes 32 0.86 Yes 0 0 No -33 0.84 Yes 35 78.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69090736 + NM_133509 RAD51B 0 . . . 1.85 0 23 6.24 Yes 8 0.83 Yes 0 0 No -22 0.85 Yes 50 96.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68847091 + NM_004360 CDH1 0 . . . 1.5 69.85 15 5.36 No 58 -4.01 No 0 0 No -30 0.85 Yes 47 39.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68819279 + NM_004360 CDH1 0 . . . 0.75 80.12 28 5.57 Yes 7 0.69 No 0 0 No -27 0.93 Yes 51 79.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68588104 + NM_133509 RAD51B 0 . . . 2.63 68.58 22 4.58 No 65 0.19 No 0 0 No -21 0.94 Yes 43 74.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68371933 + NM_133509 RAD51B 0 . . . 2.71 66.17 16 5.78 Yes 14 0.14 No 0 0 No -21 0.69 Yes 48 47.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29139436 - NM_001005735 CHEK2 0 . . . 1.16 61.39 27 5.74 Yes 76 -3.52 No 0 0 No -26 0.77 Yes 42 42.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68755247 + NM_133509 RAD51B 0 . . . 1.49 0 22 5.73 Yes 19 0.5 No 0 0 No -24 0.49 No 39 72.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84393020 - NM_139076 FAM175A 0 . . . 3.11 83.28 22 3.83 No 55 1.19 Yes 0 0 No -21 0.4 No 35 94.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59813187 - NM_032043 BRIP1 0 . . . 2.11 69.19 41 7.72 Yes 11 0.72 No 0 0 No -43 0.59 No 47 79.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108194739 + NM_000051 ATM 0 . . . 9.07 97.73 9 3.87 No 37 1.1 Yes 0 0 No -29 0.3 No 48 72.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215665001 - NM_000465 BARD1 0 . . . 8.08 82.02 28 5.38 No 25 1.31 Yes 0 0 No -27 0.48 No 37 76.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94189572 - NM_005591 MRE11 0 . . . 4.87 82.84 16 5.02 No 12 0.37 No 0 0 No -20 0.74 Yes 46 79.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47724352 + NM_000251 MSH2 0 . . . 1.11 78.05 32 4.68 No 5 -2.32 No 0 0 No -23 0.73 Yes 15 41.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69011850 + NM_133509 RAD51B 0 . . . 0.22 0 13 3.87 No 13 0.02 No 0 0 No -24 0.7 Yes 45 65.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47628989 + NM_000251 MSH2 0 . . . 4.14 76.89 20 5 No 58 1.13 Yes 0 0 No -19 0.57 No 54 67.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47653381 + NM_000251 MSH2 0 . . . 3.66 85.81 24 4.98 No 34 -1.1 No 0 0 No -43 0.52 No 54 48.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45803123 - NM_001048171 MUTYH 0 . . . 3.7 74.1 25 5.1 No 13 -1.71 No 0 0 No -24 0.81 Yes 44 27.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108203039 + NM_000051 ATM 0 . . . 0.29 63.44 26 5.38 No 59 1.32 Yes 0 0 No -25 0.8 Yes 42 48.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215610295 - NM_000465 BARD1 0 . . . 6.55 85.79 16 4.58 No 1 0.77 No 0 0 No -15 0.54 No 48 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89673257 + NM_000314 PTEN 0 . . . 9.76 86.91 31 5.48 No 1 1.01 Yes 0 0 No -25 0.55 No 43 80.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108236727 + NM_000051 ATM 0 . . . 2.95 80.22 10 4 No 58 -3.87 No 0 0 No -27 0.38 No 53 47.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59907202 - NM_032043 BRIP1 0 . . . 2.46 75.44 60 7.1 Yes 53 0.69 No 0 0 No -27 0.34 No 44 45.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68472110 + NM_133509 RAD51B 0 . . . 1.48 0 19 5.57 Yes 17 0.18 No 0 0 No -40 0.48 No 38 81.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131891995 + NM_005732 RAD50 0 . . . 0.14 0 21 5.2 No 5 0.6 No 0 0 No -20 0.53 No 47 36.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68714026 + NM_133509 RAD51B 0 . . . 3.42 67.03 37 6.24 Yes 57 -5.85 No 0 0 No -29 0.45 No 37 75.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190687104 + NM_000534 PMS1 0 . . . 3.56 87.52 40 6.32 Yes 63 0.77 No 0 0 No -37 0.41 No 53 82.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68294140 + NM_133509 RAD51B 0 . . . 6.95 80.69 28 5.73 Yes -2 0.61 No 0 0 No -26 0.9 Yes 36 53.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56809999 + NM_058216 RAD51C 0 . . . 7.21 78.89 35 6.4 Yes 73 -4.46 No 0 0 No -34 0.78 Yes 43 79.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108235286 + NM_000051 ATM 0 . . . 5.8 74.97 16 4.69 No 63 -3.14 No 0 0 No -58 0.69 Yes 40 66.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68444344 + NM_133509 RAD51B 0 . . . 6.68 71.03 25 4.28 No 13 0.14 No 0 0 No -24 0.93 Yes 45 86.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108219248 + NM_000051 ATM 0 . . . 5.8 78.37 25 5 No 0 0.72 No 0 0 No -24 0.63 No 40 54.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215610716 - NM_000465 BARD1 0 . . . 4.09 69.92 27 5.1 No 46 0.94 Yes 0 0 No -26 0.77 Yes 48 68.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89686247 + NM_000314 PTEN 0 . . . 0.1 66.53 15 4.46 No 40 0.63 No 0 0 No -45 0.57 No 40 66.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68723198 + NM_133509 RAD51B 0 . . . 11.08 82.3 33 6.66 Yes 69 -3.52 No 0 0 No -38 0.85 Yes 49 59.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68857092 + NM_004360 CDH1 0 . . . 5.56 63.89 17 5.57 Yes 34 1.27 Yes 0 0 No -20 0.65 No 48 58.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68800607 + NM_004360 CDH1 0 . . . 3.45 81.64 23 4.91 No 5 0.77 Yes 0 0 No -22 0.62 No 53 56.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59825039 - NM_032043 BRIP1 0 . . . 5.04 68.82 23 5.85 Yes 53 -4.05 No 0 0 No -22 0.52 No 39 70.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29135237 - NM_001005735 CHEK2 0 . . . 2.81 70.44 37 7.06 Yes 2 1.36 Yes 0 0 No -36 0.62 No 44 61.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52438405 - NM_004656 BAP1 0 . . . 4.39 72.8 20 3.46 No 49 0.04 No 0 0 No -20 0.4 No 38 52.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68426490 + NM_133509 RAD51B 0 . . . 0.75 72.66 15 4.81 No 37 0.77 Yes 0 0 No -28 0.93 Yes 21 43.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37087410 + NM_000249 MLH1 0 . . . 2.71 78.28 25 6.99 Yes 33 1.02 Yes 0 0 No -24 0.66 No 20 46.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68485488 + NM_133509 RAD51B 0 . . . 4.12 79.67 21 5.05 No 73 -5.35 No 0 0 No -20 0.76 Yes 46 68.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68512101 + NM_133509 RAD51B 0 . . . 7.42 77.83 23 5.05 No -4 0.48 No 0 0 No -51 0.44 No 48 78.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94196138 - NM_005591 MRE11 0 . . . 5.03 66.17 22 5.29 No 50 -1.57 No 0 0 No -47 0.56 No 44 56.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68997135 + NM_133509 RAD51B 0 . . . 1.56 78.83 30 5.48 No 58 -3.52 No 0 0 No -29 0.81 Yes 47 57.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59799190 - NM_032043 BRIP1 0 . . . 0.68 74.23 24 4.8 No 71 -5.93 No 0 0 No -23 0.73 Yes 36 48.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108241045 + NM_000051 ATM 0 . . . 8.15 84.6 22 5.07 No 18 1.2 Yes 0 0 No -24 0.7 Yes 45 54.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68719857 + NM_133509 RAD51B 0 . . . 3.29 76.4 16 5.56 Yes 48 -1.32 No 0 0 No -30 0.6 No 36 93.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59807119 - NM_032043 BRIP1 0 . . . 2.46 73.3 9 5.08 No 67 0.32 No 0 0 No -22 0.76 Yes 50 82.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37078531 + NM_000249 MLH1 0 . . . 2.5 75.18 28 5.63 Yes 55 0.17 No 0 0 No -27 0.77 Yes 51 55.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47805901 + NM_000251 MSH2 0 . . . 3.55 74.3 36 5.92 Yes 58 0.8 Yes 0 0 No -31 0.81 Yes 44 64.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68386666 + NM_133509 RAD51B 0 . . . 6.21 74.24 26 8.18 Yes 70 -5.12 No 0 0 No -28 0.41 No 45 61.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41237876 - NM_007294 BRCA1 0 . . . 3.96 77.1 36 6.96 Yes 18 0.13 No 0 0 No -35 0.73 Yes 44 85.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68422076 + NM_133509 RAD51B 0 . . . 2.26 68.43 38 7.05 Yes 40 0.13 No 0 0 No -20 0.77 Yes 18 23.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6049553 - NM_000535 PMS2 0 . . . 2.4 90.92 27 5.26 No 4 -0.7 No 0 0 No -26 0.89 Yes 13 46.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68525326 + NM_133509 RAD51B 0 . . . 7.69 81.93 28 5.38 No 2 1.84 Yes 0 0 No -27 0.43 No 47 91.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68689565 + NM_133509 RAD51B 0 . . . 9.73 90.84 16 4.69 No 6 1.61 Yes 0 0 No -22 0.43 No 52 69.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69080941 + NM_133509 RAD51B 0 . . . 1.04 64.53 44 5.46 No 75 0.68 No 0 0 No -25 0.4 No 45 73.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131905253 + NM_005732 RAD50 0 . . . 1.12 76.42 20 5.1 No 2 0.27 No 0 0 No -25 0.47 No 43 67.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104173277 - NM_001100119 XRCC3 0 . . . 6.86 74.96 31 4.65 No 48 0.47 No 0 0 No -30 0.8 Yes 45 27.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41231825 - NM_007294 BRCA1 0 . . . 1.48 0 12 4.24 No 15 1.36 Yes 0 0 No -27 0.36 No 35 59.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68495047 + NM_133509 RAD51B 0 . . . 11.06 88.33 37 6.58 Yes 22 1.33 Yes 0 0 No -24 0.81 Yes 36 67.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47742851 + NM_000251 MSH2 0 . . . 8.39 86.88 23 5.83 Yes 13 1.25 Yes 0 0 No -22 0.52 No 45 70.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59904239 - NM_032043 BRIP1 0 . . . 11.66 89.69 24 4.22 No 25 0.02 No 0 0 No -24 0.59 No 46 62.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33436621 - NM_002878 RAD51D 0 . . . 5.87 82.11 15 4.58 No 11 0.77 Yes 0 0 No -32 0.66 Yes 47 65.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29107712 - NM_001005735 CHEK2 0 . . . 3.26 84.53 22 5.74 Yes 10 0.4 No 0 0 No -27 0.78 Yes 48 93.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68497522 + NM_133509 RAD51B 0 . . . 3.32 74.17 32 5.92 Yes 53 0.99 Yes 0 0 No -57 0.57 No 33 58.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190737572 + NM_000534 PMS1 0 . . . 1.24 74.73 56 9.85 Yes 36 1.27 Yes 0 0 No -55 0.94 Yes 22 80.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68769662 + NM_133509 RAD51B 0 . . . 1.99 68.92 24 6.05 Yes 48 -2.91 No 0 0 No -23 0.4 No 46 49.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68902745 + NM_133509 RAD51B 0 . . . 1.72 0 26 5.65 Yes 33 0.61 No 0 0 No -25 0.78 Yes 25 49.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68643244 + NM_133509 RAD51B 0 . . . 1.45 68.2 21 4.58 No 32 0.24 No 0 0 No -20 0.83 Yes 44 70.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94199627 - NM_005591 MRE11 0 . . . 0.28 54.57 28 5.38 No 44 -3.55 No 0 0 No -27 0.73 Yes 46 60.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68560641 + NM_133509 RAD51B 0 . . . 3.77 76 27 5.2 No -1 0.38 No 0 0 No -51 0.89 Yes 49 89.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68477545 + NM_133509 RAD51B 0 . . . 0.73 72.18 26 4.59 No 0 0.83 Yes 0 0 No -25 0.51 No 46 59.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68682678 + NM_133509 RAD51B 0 . . . 1.78 67.77 18 5.91 Yes 2 0.73 No 0 0 No -17 0.73 Yes 38 91.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68403404 + NM_133509 RAD51B 0 . . . 0.41 71.44 74 5.42 No 5 0.48 No 0 0 No -35 0.54 No 22 54.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47785160 + NM_000251 MSH2 0 . . . 3.37 83.77 62 5.16 No 69 -2.07 No 0 0 No -36 0.53 No 48 51.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84403846 - NM_139076 FAM175A 0 . . . 2.87 88.76 25 4.86 No 36 2.37 Yes 0 0 No -19 0.28 No 22 92.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69109912 + NM_133509 RAD51B 0 . . . 5.74 78.12 22 5.29 No 13 0.79 Yes 0 0 No -26 0.82 Yes 45 95.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68467354 + NM_133509 RAD51B 0 . . . 5.81 86.57 35 7.87 Yes 8 0.49 No 0 0 No -34 0.79 Yes 50 64.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37077239 + NM_000249 MLH1 0 . . . 0.18 74.18 41 7.41 Yes 46 0.67 No 0 0 No -40 0.76 Yes 46 48.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152352770 - NM_005431 XRCC2 0 . . . 5.68 90.92 17 6.07 Yes 3 1.54 Yes 0 0 No -16 0.69 Yes 43 62.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47749806 + NM_000251 MSH2 0 . . . 4.89 86.74 30 6.71 Yes 76 0.83 Yes 0 0 No -30 0.44 No 38 69.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68622071 + NM_133509 RAD51B 0 . . . 1.94 68.84 49 8.08 Yes 52 1.16 Yes 0 0 No -41 0.9 Yes 48 78.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69112232 + NM_133509 RAD51B 0 . . . 2.6 70.12 30 6.07 Yes 75 -3.56 No 0 0 No -29 0.68 Yes 47 78.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75517998 - NM_001040108 MLH3 0 . . . 2.86 69.6 20 5.57 Yes 5 0.24 No 0 0 No -19 0.6 No 27 28.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90972330 - NM_002485 NBN 0 . . . 5.75 79.2 34 6.86 Yes 71 0.24 No 0 0 No -33 0.5 No 41 45.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75490079 - NM_001040108 MLH3 0 . . . 3.74 73.57 29 7.5 Yes 46 1.15 Yes 0 0 No -28 0.54 No 35 74.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59802072 - NM_032043 BRIP1 0 . . . 4.82 81.35 9 5 No 36 0.98 Yes 0 0 No -18 0.71 Yes 41 95.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68618452 + NM_133509 RAD51B 0 . . . 4.02 84.46 49 7.28 Yes 49 1.45 Yes 0 0 No -48 0.74 Yes 47 74.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69049570 + NM_133509 RAD51B 0 . . . 7.7 85.1 42 5.25 No 1 0.51 No 0 0 No -37 0.59 No 49 43.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90982079 - NM_002485 NBN 0 . . . 3.19 80.75 20 6.16 Yes 32 0.99 Yes 0 0 No -23 0.67 Yes 26 84.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32949431 + NM_000059 BRCA2 0 . . . 2.05 0 18 4.36 No 46 0.12 No 0 0 No -42 0.65 No 52 62.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68706456 + NM_133509 RAD51B 0 . . . 3.28 89.39 33 4.67 No 56 0.36 No 0 0 No -28 0.43 No 48 43.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69037580 + NM_133509 RAD51B 0 . . . 1.52 77.22 22 5.25 No 54 -5.61 No 0 0 No -21 0.89 Yes 45 38.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190727558 + NM_000534 PMS1 0 . . . 1.68 70.45 18 5.91 Yes 59 0.35 No 0 0 No -50 0.53 No 43 86.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37066637 + NM_000249 MLH1 0 . . . 2.24 80.94 30 5.37 No 74 0.51 No 0 0 No -22 0.62 No 48 61.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68372951 + NM_133509 RAD51B 0 . . . 3.5 84.77 26 5.81 Yes 7 0.48 No 0 0 No -30 0.76 Yes 51 65.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47672172 + NM_000251 MSH2 0 . . . 0.67 80.37 19 3.7 No 76 1.17 Yes 0 0 No -44 0.77 Yes 50 83.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68837987 + NM_133509 RAD51B 0 . . . 0.87 74.68 30 4.56 No 39 0.03 No 0 0 No -33 0.47 No 54 81.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29099419 - NM_001005735 CHEK2 0 . . . 0.35 0 38 6.44 Yes 52 0.7 No 0 0 No -37 0.56 No 15 18.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48011703 + NM_000179 MSH6 0 . . . 3.9 67.61 26 6.14 Yes 16 1.3 Yes 0 0 No -25 0.36 No 42 88.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59890600 - NM_032043 BRIP1 0 . . . 6.55 72.94 30 6 Yes 41 -0.74 No 0 0 No -24 0.5 No 39 62.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47630177 + NM_000251 MSH2 0 . . . 2.99 73.67 35 6.18 Yes 48 -1.2 No 0 0 No -35 0.26 No 50 87.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89625042 + NM_000314 PTEN 0 . . . 4.28 62.76 14 5.45 No 18 0.61 No 0 0 No -18 0.59 No 36 66.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68999589 + NM_133509 RAD51B 0 . . . 4.08 75.1 20 4.76 No 47 -3.58 No 0 0 No -19 0.83 Yes 46 44.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37042373 + NM_000249 MLH1 0 . . . 0.22 61.29 43 6.56 Yes 19 0.58 No 0 0 No -34 0.58 No 39 85.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40998471 + NM_001164269 RAD51 0 . . . 1.44 70.17 16 3.87 No 52 -3.55 No 0 0 No -26 0.63 No 29 48.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68855183 + NM_133509 RAD51B 0 . . . 3.75 72.29 23 7.28 Yes 61 0.66 No 0 0 No -22 0.97 Yes 46 69.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69001131 + NM_133509 RAD51B 0 . . . 0.12 70.65 19 6 Yes 52 -5.16 No 0 0 No -18 0.81 Yes 62 20.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68881971 + NM_133509 RAD51B 0 . . . 6.75 65.44 15 5.38 No 74 0.5 No 0 0 No -54 0.55 No 49 29.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68795912 + NM_004360 CDH1 0 . . . 6.85 77.92 21 6.2 Yes 72 0.3 No 0 0 No -20 0.79 Yes 40 75.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90970421 - NM_002485 NBN 0 . . . 8.34 90.33 16 5.08 No 2 0.41 No 0 0 No -26 0.57 No 46 68.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799882 + NM_058216 RAD51C 0 . . . 3.89 0 27 5.96 Yes 10 1.17 Yes 0 0 No -32 0.41 No 48 67.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68923506 + NM_133509 RAD51B 0 . . . 1.7 77.74 37 7.62 Yes 17 0.25 No 0 0 No -18 0.55 No 44 46.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015190 + NM_000179 MSH6 0 . . . 3.75 72.58 24 5.29 No -2 0.01 No 0 0 No -28 0.59 No 49 70.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41268429 - NM_007294 BRCA1 0 . . . 1.11 76.63 31 4.17 No 74 -4.36 No 0 0 No -38 0.35 No 39 88.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68412306 + NM_133509 RAD51B 0 . . . 0.68 83.85 35 6.4 Yes 69 0.78 Yes 0 0 No -34 0.68 Yes 51 45.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89696802 + NM_000314 PTEN 0 . . . 3.56 68.81 19 4.69 No 70 0.72 No 0 0 No -38 0.9 Yes 45 54.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89732728 + NM_000314 PTEN 0 . . . 1.93 66.23 14 4.76 No 64 0.47 No 0 0 No -26 0.77 Yes 46 85.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1218461 + NM_000455 STK11 0 . . . 0.75 67.71 31 7.5 Yes 60 1.42 Yes 0 0 No -30 0.86 Yes 53 50.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89712128 + NM_000314 PTEN 0 . . . 4.76 79.84 26 3.7 No 52 -3.97 No 0 0 No -25 0.7 Yes 48 86.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68601308 + NM_133509 RAD51B 0 . . . 2.37 60.24 34 4.57 No 74 -2.2 No 0 0 No -22 0.52 No 54 54.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131926241 + NM_005732 RAD50 0 . . . 5.97 74.85 23 4.83 No 68 -2.43 No 0 0 No -22 0.76 Yes 51 79.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131901001 + NM_005732 RAD50 0 . . . 3.24 91.87 17 4.8 No 39 0.62 No 0 0 No -19 0.69 Yes 44 61.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68740379 + NM_133509 RAD51B 0 . . . 3.77 64.13 26 5.44 No 37 -3.55 No 0 0 No -27 0.44 No 40 15.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6039679 - NM_000535 PMS2 0 . . . 7.79 81.83 29 5.48 No 24 1.63 Yes 0 0 No -28 0.88 Yes 45 93.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68538167 + NM_133509 RAD51B 0 . . . 2.76 72.52 20 5.83 Yes 30 0.49 No 0 0 No -24 0.39 No 41 82.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32960936 + NM_000059 BRCA2 0 . . . 6.25 77.6 19 4.02 No 67 -1.58 No 0 0 No -18 0.94 Yes 51 56.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69142550 + NM_133509 RAD51B 0 . . . 9.49 83 51 7.22 Yes 18 1.81 Yes 0 0 No -34 0.75 Yes 40 94.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108162855 + NM_000051 ATM 0 . . . 5.35 83.86 85 7.04 Yes 32 -2.52 No 0 0 No -32 0.35 No 50 84.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68497992 + NM_133509 RAD51B 0 . . . 5.74 71.15 28 5.08 No 66 -3.21 No 0 0 No -42 0.63 No 37 31.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47758179 + NM_000251 MSH2 0 . . . 1.73 64.15 13 4.36 No 75 -2.26 No 0 0 No -20 0.82 Yes 44 50.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59861935 - NM_032043 BRIP1 0 . . . 3.38 75.74 69 8.37 Yes 74 1.17 Yes 0 0 No -28 0.55 No 45 50.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69098974 + NM_133509 RAD51B 0 . . . 4.69 77.16 43 6.74 Yes 61 0.89 Yes 0 0 No -40 0.45 No 56 45.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89678319 + NM_000314 PTEN 0 . . . 3.17 0 15 5.45 No 48 0.44 No 0 0 No -20 0.51 No 50 75.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68985435 + NM_133509 RAD51B 0 . . . 4.03 72.04 26 3.57 No 9 0.31 No 0 0 No -28 0.69 Yes 49 51.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45804723 - NM_001048171 MUTYH 0 . . . 2.72 62.77 22 4.61 No 31 1.08 Yes 0 0 No -30 0.74 Yes 22 72.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56802279 + NM_058216 RAD51C 0 . . . 0.51 63.72 28 5.29 No 46 -4.67 No 0 0 No -27 0.86 Yes 47 68.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89667632 + NM_000314 PTEN 0 . . . 2.27 74.97 15 4.58 No 37 1.23 Yes 0 0 No -32 0.75 Yes 38 68.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94190402 - NM_005591 MRE11 0 . . . 3.12 68.91 27 6.93 Yes 14 1.47 Yes 0 0 No -22 0.51 No 44 86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21973829 - NM_000077 CDKN2A 0 . . . 2.93 77.55 33 5.66 Yes -3 0.25 No 0 0 No -30 0.41 No 43 81.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68487665 + NM_133509 RAD51B 0 . . . 0.9 75.05 13 5.29 No 32 0.86 Yes 0 0 No -22 0.74 Yes 45 50.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69068686 + NM_133509 RAD51B 0 . . . 5.42 77.44 22 4.69 No 55 1.57 Yes 0 0 No -24 0.51 No 26 55.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68813327 + NM_133509 RAD51B 0 . . . 5.66 78.1 37 6.55 Yes 65 0.83 Yes 0 0 No -36 0.68 Yes 46 62.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29087222 - NM_001005735 CHEK2 0 . . . 2.95 70.85 12 4.24 No 23 1.81 Yes 0 0 No -30 0.89 Yes 35 69.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47751342 + NM_000251 MSH2 0 . . . 3.69 71.03 30 4.43 No 27 0.16 No 0 0 No -26 0.78 Yes 43 81.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7569616 - NM_000546 TP53 0 . . . 3.1 78.06 31 8.59 Yes 21 0.43 No 0 0 No -30 0.42 No 42 36.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105204797 + NM_021930 RINT1 0 . . . 3.15 68.34 19 5.3 No 23 1.47 Yes 0 0 No -31 0.76 Yes 40 42.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131894846 + NM_005732 RAD50 0 . . . 7.57 99.29 36 5.9 Yes 13 0.89 Yes 0 0 No -25 0.51 No 45 89.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131962691 + NM_005732 RAD50 0 . . . 0.46 83.85 18 4.32 No 27 1.81 Yes 0 0 No -27 0.51 No 25 77.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89651449 + NM_000314 PTEN 0 . . . 5.13 82.65 10 5 No 45 0.27 No 0 0 No -23 0.54 No 52 75.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190648472 + NM_000534 PMS1 0 . . . 7.81 83.87 46 6.71 Yes 13 0.25 No 0 0 No -45 0.66 No 45 93.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59925932 - NM_032043 BRIP1 0 . . . 1.54 0 20 4.92 No 52 0.29 No 0 0 No -22 0.58 No 41 49.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152370260 - NM_005431 XRCC2 0 . . . 3.2 78.8 16 5.92 Yes 34 0.44 No 0 0 No -29 0.69 Yes 44 89.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59852158 - NM_032043 BRIP1 0 . . . 4.14 65.44 24 4.79 No -3 0.96 Yes 0 0 No -23 0.5 No 49 86.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68545898 + NM_133509 RAD51B 0 . . . 9.29 86.24 26 5 No 48 0.98 Yes 0 0 No -29 0.26 No 46 61.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68617167 + NM_133509 RAD51B 0 . . . 3.65 62.05 12 5.66 Yes 11 0.6 No 0 0 No -25 0.77 Yes 43 50.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190671530 + NM_000534 PMS1 0 . . . 7.05 72.29 20 5.1 No 10 0.8 Yes 0 0 No -43 0.63 No 34 71.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90986137 - NM_002485 NBN 0 . . . 3.64 73.17 28 6.61 Yes 59 0.54 No 0 0 No -27 0.82 Yes 46 51.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68822518 + NM_133509 RAD51B 0 . . . 4.65 70.68 37 5.98 Yes 67 -2.67 No 0 0 No -36 0.39 No 33 69.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47760791 + NM_000251 MSH2 0 . . . 2.51 70.19 52 6.98 Yes 18 1.34 Yes 0 0 No -25 0.34 No 40 94.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94210716 - NM_005591 MRE11 0 . . . 4.44 81.09 16 6.06 Yes -4 1.01 Yes 0 0 No -27 0.9 Yes 46 59.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68671320 + NM_133509 RAD51B 0 . . . 1.35 65.61 45 6.18 Yes 35 1.13 Yes 0 0 No -57 0.8 Yes 51 45.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68929739 + NM_133509 RAD51B 0 . . . 3.86 75.5 16 5.29 No 13 0.11 No 0 0 No -26 0.55 No 45 94.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6020090 - NM_000535 PMS2 0 . . . 6.15 82.15 17 6.08 Yes 6 0.69 No 0 0 No -16 0.62 No 52 86.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108111972 + NM_000051 ATM 0 . . . 2.83 75.18 10 4.58 No 19 0.69 No 0 0 No -31 0.78 Yes 39 67.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215674677 - NM_000465 BARD1 0 . . . 10.45 74.64 25 4.77 No NA NA NA 0 0 No -24 0.8 Yes 21 48.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68820548 + NM_004360 CDH1 0 . . . 4.31 0 33 3.86 No 5 0.81 Yes 0 0 No -32 0.54 No 53 81.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68824380 + NM_004360 CDH1 0 . . . 6.99 87.03 24 5.97 Yes 53 1.09 Yes 0 0 No -23 0.73 Yes 51 68.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68575207 + NM_133509 RAD51B 0 . . . 0.41 65.38 21 4.92 No 2 0.32 No 0 0 No -20 0.7 Yes 46 51.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1210331 + NM_000455 STK11 0 . . . 2.48 74.34 29 4.89 No 4 -2.38 No 0 0 No -22 0.82 Yes 55 59.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89669442 + NM_000314 PTEN 0 . . . 8.28 80.1 18 6.24 Yes -3 0.16 No 0 0 No -22 0.44 No 45 57.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89670800 + NM_000314 PTEN 0 . . . 0.45 72.36 20 5.56 Yes 21 -3.42 No 0 0 No -28 0.7 Yes 52 59.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23632337 - NM_024675 PALB2 0 . . . 2.97 77.24 38 6.11 Yes 34 1.05 Yes 0 0 No -37 0.75 Yes 24 67.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23619500 - NM_024675 PALB2 0 . . . 3.04 70.57 39 6.38 Yes 68 0.74 No 0 0 No -38 0.64 No 56 32.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94211324 - NM_005591 MRE11 0 . . . 3.07 77.65 15 4.39 No 62 -2.01 No 0 0 No -22 0.93 Yes 46 86.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68622786 + NM_133509 RAD51B 0 . . . 0.91 61.92 16 4.69 No 19 -2.26 No 0 0 No -23 0.44 No 50 36.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68953146 + NM_133509 RAD51B 0 . . . 4.16 81.52 9 5.1 No 58 0.23 No 0 0 No -8 0.4 No 40 66.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68849169 + NM_133509 RAD51B 0 . . . 5.56 70.04 45 6.15 Yes 66 0.9 Yes 0 0 No -28 0.26 No 59 80.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68940053 + NM_133509 RAD51B 0 . . . 2.73 0 16 4.57 No 56 0.64 No 0 0 No -22 0.84 Yes 49 51.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042732 - NM_000535 PMS2 0 . . . 2.71 71.42 16 5.15 No 33 1.17 Yes 0 0 No -24 0.68 Yes 25 39.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89729966 + NM_000314 PTEN 0 . . . 2.38 68.19 24 6.12 Yes 31 -3.96 No 0 0 No -23 0.46 No 46 51.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69060922 + NM_133509 RAD51B 0 . . . 8.31 88.74 21 5.71 Yes 21 -1.01 No 0 0 No -34 0.45 No 43 71.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215588830 - NM_000465 BARD1 0 . . . 2.33 75.21 32 8.06 Yes 3 0.83 Yes 0 0 No -31 0.43 No 29 63.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68887909 + NM_133509 RAD51B 0 . . . 4.3 71.7 15 6.45 Yes 32 -1.89 No 0 0 No -24 0.7 Yes 31 78.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68850178 + NM_004360 CDH1 0 . . . 3.68 71.76 31 5.48 No 17 1.56 Yes 0 0 No -26 0.6 No 41 63.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7584362 - NM_000546 TP53 0 . . . 1.31 0 22 6.34 Yes 35 0.36 No 0 0 No -29 0.68 Yes 45 86.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89701025 + NM_000314 PTEN 0 . . . 3.62 66.7 18 6.32 Yes -4 0.65 No 0 0 No -26 0.52 No 42 37.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215613649 - NM_000465 BARD1 0 . . . 4.65 80.72 28 6.78 Yes 29 -0.85 No 0 0 No -24 0.49 No 51 59.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68894376 + NM_133509 RAD51B 0 . . . 2.56 77.72 15 4.13 No 21 0.58 No 0 0 No -19 0.53 No 46 33.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68957145 + NM_133509 RAD51B 0 . . . 0.42 61.29 20 4.9 No -2 0.13 No 0 0 No -45 0.77 Yes 38 46.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40998012 + NM_001164269 RAD51 0 . . . 2.1 72.33 29 7.35 Yes 32 1.3 Yes 0 0 No -28 0.93 Yes 26 87.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1204077 + NM_000455 STK11 0 . . . 2.77 73.72 15 5.36 No 25 1.43 Yes 0 0 No -28 0.46 No 33 87.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23613620 - NM_024675 PALB2 0 . . . 0.18 68.34 10 3.22 No 23 1.42 Yes 0 0 No -28 0.31 No 40 72.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47729286 + NM_000251 MSH2 0 . . . 0.36 68.34 16 4.69 No 62 0.81 Yes 0 0 No -24 0.82 Yes 59 28.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89658111 + NM_000314 PTEN 0 . . . 1.75 0 9 3.82 No 66 -4.71 No 0 0 No -12 0.21 No 46 45.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47727789 + NM_000251 MSH2 0 . . . 5.45 89.74 23 5.2 No 60 -1.6 No 0 0 No -51 0.57 No 47 54.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68653593 + NM_133509 RAD51B 0 . . . 3.78 71.87 34 6.86 Yes 24 0.67 No 0 0 No -33 0.6 No 34 38.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59917049 - NM_032043 BRIP1 0 . . . 1.24 69.87 26 5.15 No 3 1.36 Yes 0 0 No -25 0.91 Yes 46 54.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89721396 + NM_000314 PTEN 0 . . . 0.33 75.6 16 4.68 No 42 -2.36 No 0 0 No -22 0.56 No 45 68.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29091561 - NM_001005735 CHEK2 0 . . . 2.03 66.47 19 5 No 15 1.56 Yes 0 0 No -48 0.84 Yes 43 95.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68861472 + NM_004360 CDH1 0 . . . 3.98 75.63 19 5 No 53 1.48 Yes 0 0 No -25 0.48 No 52 61.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68519408 + NM_133509 RAD51B 0 . . . 1.55 68.24 17 6.45 Yes 71 1.71 Yes 0 0 No -16 0.63 No 49 55.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56769990 + NM_058216 RAD51C 0 . . . 1.18 61.6 26 5.29 No 51 -4.16 No 0 0 No -25 0.85 Yes 48 27.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68541695 + NM_133509 RAD51B 0 . . . 2.56 0 61 8.72 Yes 27 0.29 No 0 0 No -26 0.51 No 49 92.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32963594 + NM_000059 BRCA2 0 . . . 5.62 81.13 15 4.58 No 44 1.46 Yes 0 0 No -19 0.68 Yes 36 84.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68797214 + NM_133509 RAD51B 0 . . . 2.31 80.19 16 4.69 No 13 0.57 No 0 0 No -38 0.52 No 51 66.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144682 + NM_133509 RAD51B 0 . . . 5.85 71.28 60 8.12 Yes NA NA NA 0 0 No -39 0.36 No 48 80.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68870563 + NM_004360 CDH1 0 . . . 1.94 77.21 18 4.9 No 36 0.31 No 0 0 No -28 0.7 Yes 22 90.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47670154 + NM_000251 MSH2 0 . . . 0.49 0 34 7.35 Yes 62 0.45 No 0 0 No -33 0.53 No 45 62.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75480408 - NM_001040108 MLH3 0 . . . 5.18 76.46 38 6.48 Yes 74 1.25 Yes 0 0 No -37 0.33 No 39 93.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190697927 + NM_000534 PMS1 0 . . . 6.81 78.24 18 4.79 No 2 1.81 Yes 0 0 No -42 0.88 Yes 42 87.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69065084 + NM_133509 RAD51B 0 . . . 10.29 91.27 34 4.79 No 1 0.27 No 0 0 No -20 0.88 Yes 50 78.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108134680 + NM_000051 ATM 0 . . . 3.6 65.4 13 4.12 No 76 -2.24 No 0 0 No -12 0.47 No 18 25.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6046878 - NM_000535 PMS2 0 . . . 0.59 74.68 18 4.56 No 53 0.69 No 0 0 No -56 0.44 No 47 91.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37088435 + NM_000249 MLH1 0 . . . 3.08 64.86 16 5.38 No 19 0.11 No 0 0 No -23 0.86 Yes 39 55.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56793942 + NM_058216 RAD51C 0 . . . 6.56 85.09 31 5.17 No 76 1.49 Yes 0 0 No -25 0.28 No 50 82.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68972689 + NM_133509 RAD51B 0 . . . 1.81 84.23 33 6.02 Yes -3 -1.62 No 0 0 No -32 0.79 Yes 45 50.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89654853 + NM_000314 PTEN 0 . . . 7.09 81.42 26 6.98 Yes 20 -1.6 No 0 0 No -31 0.56 No 51 52.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190700624 + NM_000534 PMS1 0 . . . 2.95 70.31 25 5.32 No 69 -4.02 No 0 0 No -24 0.92 Yes 43 67.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68337077 + NM_133509 RAD51B 0 . . . 0.46 62.24 25 5.98 Yes 39 -4.6 No 0 0 No -24 0.51 No 61 20.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32970841 + NM_000059 BRCA2 0 . . . 7.97 82.36 24 4.55 No 50 0.19 No 0 0 No -23 0.84 Yes 38 70.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68790483 + NM_133509 RAD51B 0 . . . 2.1 76.63 28 8.75 Yes 58 -4.03 No 0 0 No -27 0.83 Yes 48 80.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32899464 + NM_000059 BRCA2 0 . . . 8.87 72.48 22 4.47 No 42 1.34 Yes 0 0 No -17 0.52 No 48 94.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68320194 + NM_133509 RAD51B 0 . . . 1.03 70.93 43 7 Yes -4 0.79 Yes 0 0 No -22 0.59 No 46 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68806142 + NM_004360 CDH1 0 . . . 4.77 74.06 21 4.69 No -3 0.43 No 0 0 No -20 0.92 Yes 29 83.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59875755 - NM_032043 BRIP1 0 . . . 2.68 68.01 34 5.71 Yes 20 1.59 Yes 0 0 No -33 0.43 No 38 90.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23614081 - NM_024675 PALB2 0 . . . 1.83 83.58 35 5.9 Yes 3 0.7 No 0 0 No -20 0.48 No 51 72.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90976551 - NM_002485 NBN 0 . . . 3.26 74.83 25 5.28 No 72 0.2 No 0 0 No -24 0.73 Yes 43 80.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152357214 - NM_005431 XRCC2 0 . . . 2.37 0 16 5.3 No 63 1.12 Yes 0 0 No -27 0.77 Yes 37 41.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89636241 + NM_000314 PTEN 0 . . . 4.31 66.73 19 5.8 Yes 50 0.44 No 0 0 No -18 0.85 Yes 43 70.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75483247 - NM_001040108 MLH3 0 . . . 2.78 88.52 55 7.64 Yes 59 0.58 No 0 0 No -19 0.29 No 50 92.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84407116 - NM_139076 FAM175A 0 . . . 0.47 71.35 28 5.44 No 66 -2.48 No 0 0 No -27 0.74 Yes 53 22.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94222817 - NM_005591 MRE11 0 . . . 1.03 0 27 5.29 No 32 1.22 Yes 0 0 No -26 0.48 No 47 66.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108216839 + NM_000051 ATM 0 . . . 5.52 79.49 42 6.63 Yes 68 1.34 Yes 0 0 No -26 0.41 No 42 88.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47663393 + NM_000251 MSH2 0 . . . 2.73 65.45 16 5.26 No 13 0.66 No 0 0 No -22 0.67 Yes 45 81.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59862237 - NM_032043 BRIP1 0 . . . 0.34 0 28 7.75 Yes 72 0.78 Yes 0 0 No -27 0.89 Yes 32 72.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59862964 - NM_032043 BRIP1 0 . . . 5.73 81.26 21 4.87 No 31 0.77 No 0 0 No -20 0.74 Yes 27 91.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68436414 + NM_133509 RAD51B 0 . . . 6.98 82.43 14 5.39 No 60 0.52 No 0 0 No -50 0.66 Yes 49 56.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84407537 - NM_139076 FAM175A 0 . . . 4.93 75.05 23 5.1 No 39 0.8 Yes 0 0 No -22 0.5 No 53 39.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89699829 + NM_000314 PTEN 0 . . . 0.86 75.03 25 5.36 No 58 0.38 No 0 0 No -22 0.73 Yes 50 78.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68854508 + NM_133509 RAD51B 0 . . . 1.66 56.97 43 6.58 Yes 48 1.38 Yes 0 0 No -28 0.54 No 36 68.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68441887 + NM_133509 RAD51B 0 . . . 0.6 71.05 23 4.72 No 51 1.07 Yes 0 0 No -22 0.69 Yes 47 83.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59817780 - NM_032043 BRIP1 0 . . . 4.25 76.79 19 4.97 No 39 0.04 No 0 0 No -29 0.78 Yes 44 57.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68851232 + NM_133509 RAD51B 0 . . . 6.32 87.61 21 4.76 No 9 0.22 No 0 0 No -23 0.66 Yes 42 61.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68556432 + NM_133509 RAD51B 0 . . . 3.79 76.81 54 7.24 Yes 7 0.84 Yes 0 0 No -33 0.39 No 51 69.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68861945 + NM_004360 CDH1 0 . . . 0.83 71.18 24 5.42 No -1 0.24 No 0 0 No -26 0.35 No 49 75.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94170888 - NM_005591 MRE11 0 . . . 1.82 79.29 16 3.47 No 66 -4.54 No 0 0 No -33 0.81 Yes 47 46.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190677361 + NM_000534 PMS1 0 . . . 1.45 65.58 25 4.89 No 62 -5.67 No 0 0 No -24 0.5 No 43 23.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48016982 + NM_000179 MSH6 0 . . . 1.91 83.24 23 4.9 No 19 0.55 No 0 0 No -22 0.47 No 39 52.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40996586 + NM_001164269 RAD51 0 . . . 8.96 90.58 47 5.57 Yes 74 0.67 No 0 0 No -37 0.41 No 40 75.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68859389 + NM_004360 CDH1 0 . . . 3.68 77.98 23 5.06 No 9 1.18 Yes 0 0 No -22 0.48 No 45 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69023874 + NM_133509 RAD51B 0 . . . 0.46 58.71 28 5.57 Yes 30 0.33 No 0 0 No -27 0.97 Yes 39 46.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69145389 + NM_133509 RAD51B 0 . . . 0.81 0 21 4.8 No 23 0.9 Yes 0 0 No -25 0.45 No 43 75.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68427749 + NM_133509 RAD51B 0 . . . 1.58 0 54 7.24 Yes 38 1.27 Yes 0 0 No -36 0.57 No 43 85.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37036136 + NM_000249 MLH1 0 . . . 3.51 72.33 10 4 No 68 -2.12 No 0 0 No -41 0.34 No 34 36.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68883391 + NM_133509 RAD51B 0 . . . 1.81 67.28 16 5.38 No 58 1 Yes 0 0 No -24 0.66 No 56 25.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56811922 + NM_058216 RAD51C 0 . . . 4.59 69.52 40 7.54 Yes 23 1.21 Yes 0 0 No -25 0.66 No 24 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41228078 - NM_007294 BRCA1 0 . . . 5.22 72.67 26 4.82 No 37 0.58 No 0 0 No -21 0.64 No 18 43.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59830330 - NM_032043 BRIP1 0 . . . 0.36 68.42 17 6.93 Yes 36 0.64 No 0 0 No -23 0.54 No 37 65.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1215946 + NM_000455 STK11 0 . . . 0.42 74.73 29 5.66 Yes 33 1.16 Yes 0 0 No -28 0.75 Yes 14 40.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33430045 - NM_002878 RAD51D 0 . . . 3.67 0 22 6.16 Yes 59 0.6 No 0 0 No -22 0.88 Yes 51 55.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47725320 + NM_000251 MSH2 0 . . . 7.42 81.05 27 5.7 Yes 54 1.86 Yes 0 0 No -27 0.47 No 40 78.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37036183 + NM_000249 MLH1 0 . . . 5.94 75.72 13 5.24 No 30 0.08 No 0 0 No -25 0.57 No 42 56.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59800597 - NM_032043 BRIP1 0 . . . 3.65 89.73 27 6.52 Yes 37 1.51 Yes 0 0 No -26 0.4 No 46 71.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47784727 + NM_000251 MSH2 0 . . . 4.15 74.72 21 5.63 Yes 28 0.86 Yes 0 0 No -26 0.74 Yes 38 64.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6012897 - NM_000535 PMS2 0 . . . 1.57 63.53 33 6.16 Yes 51 2.39 Yes 0 0 No -32 0.69 Yes 39 81.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29134667 - NM_001005735 CHEK2 0 . . . 3.25 82.89 18 5.3 No 67 0.47 No 0 0 No -17 0.57 No 52 57.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68424770 + NM_133509 RAD51B 0 . . . 4.02 67.93 19 7.07 Yes 7 1.23 Yes 0 0 No -18 0.71 Yes 35 43.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41248505 - NM_007294 BRCA1 0 . . . 1.79 71.84 26 4.8 No 16 1.13 Yes 0 0 No -20 0.74 Yes 42 93.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68416102 + NM_133509 RAD51B 0 . . . 1.21 79.39 31 6.23 Yes 52 1.21 Yes 0 0 No -24 0.53 No 46 59.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69000251 + NM_133509 RAD51B 0 . . . 0 64.64 11 13.96 Yes -4 0.03 No 0 0 No -30 0.2 No 47 30.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190697015 + NM_000534 PMS1 0 . . . 4.11 73.2 42 4.79 No -4 0.01 No 0 0 No -41 0.89 Yes 40 75.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48031157 + NM_000179 MSH6 0 . . . 1.91 74.63 17 5.54 No 72 0.63 No 0 0 No -29 0.65 No 47 64.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23636351 - NM_024675 PALB2 0 . . . 2.97 75.22 22 4.8 No 70 0.78 Yes 0 0 No -21 0.97 Yes 51 50.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104180893 - NM_001100119 XRCC3 0 . . . 0.62 0 16 4.85 No 62 0.47 No 0 0 No -24 0.44 No 62 41.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68467786 + NM_133509 RAD51B 0 . . . 0.88 65.21 32 6.12 Yes 17 -1.47 No 0 0 No -31 0.76 Yes 50 89.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89631025 + NM_000314 PTEN 0 . . . 4.89 0 16 4.58 No 25 1.46 Yes 0 0 No -15 0.61 No 33 73.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56773411 + NM_058216 RAD51C 0 . . . 0.33 0 26 5.07 No 70 0.15 No 0 0 No -26 0.72 Yes 51 59.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94217116 - NM_005591 MRE11 0 . . . 7.92 85.16 35 5.87 Yes 23 -0.79 No 0 0 No -34 0.48 No 37 60.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69056427 + NM_133509 RAD51B 0 . . . 4.9 78.05 12 5.83 Yes 61 0.86 Yes 0 0 No -25 0.22 No 57 60.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37072480 + NM_000249 MLH1 0 . . . 3.43 0 18 7.28 Yes 70 -0.88 No 0 0 No -24 0.55 No 54 72.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29110243 - NM_001005735 CHEK2 0 . . . 4.88 74.17 44 6.99 Yes 3 0.45 No 0 0 No -24 0.17 No 55 35.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33439056 - NM_002878 RAD51D 0 . . . 0.68 0 134 10.13 Yes 47 -2.8 No 0 0 No -35 0.97 Yes 45 35.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68862197 + NM_133509 RAD51B 0 . . . 4.97 86.71 23 4.9 No 43 -4.56 No 0 0 No -43 0.68 Yes 45 65.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94204585 - NM_005591 MRE11 0 . . . 3.14 74.19 24 4.65 No 48 1.71 Yes 0 0 No -24 0.75 Yes 42 85.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94205455 - NM_005591 MRE11 0 . . . 3.51 65.62 29 4.16 No 28 0.58 No 0 0 No -28 0.75 Yes 30 62.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47665473 + NM_000251 MSH2 0 . . . 3.01 0 62 7.44 Yes 13 1.97 Yes 0 0 No -40 0.63 No 45 90.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108099863 + NM_000051 ATM 0 . . . 1.3 70.85 13 5.1 No 73 -1.95 No 24 0.85 Yes -16 0.31 No 44 74.43 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 108159826 + NM_000051 ATM 0 . . . 1.53 75.88 13 3.54 No 61 0.15 No 0 0 No -28 0.21 No 47 86.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47661642 + NM_000251 MSH2 0 . . . 0.75 75.52 29 5.75 Yes 51 -4.48 No 0 0 No -23 0.42 No 46 60.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68453010 + NM_133509 RAD51B 0 . . . 1.23 80.01 24 6.99 Yes 72 -5.26 No 0 0 No -21 0.79 Yes 47 47.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68450992 + NM_133509 RAD51B 0 . . . 2.89 0 23 4.85 No 53 -2.08 No 0 0 No -22 0.73 Yes 45 66.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84390015 - NM_139076 FAM175A 0 . . . 3.05 70.33 18 5.38 No 19 1.2 Yes 0 0 No -23 0.32 No 39 91.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68395492 + NM_133509 RAD51B 0 . . . 6.8 94.79 17 4.69 No 38 0.48 No 0 0 No -20 0.39 No 36 48.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59813662 - NM_032043 BRIP1 0 . . . 5.53 86.67 32 4.15 No 74 0.87 Yes 0 0 No -26 0.51 No 18 71.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90947622 - NM_002485 NBN 0 . . . 9.47 96.88 24 5.26 No 11 0.81 Yes 0 0 No -23 0.8 Yes 47 77.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29099285 - NM_001005735 CHEK2 0 . . . 1.39 77.7 22 5.29 No 45 -4.65 No 0 0 No -21 0.77 Yes 45 41.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108217829 + NM_000051 ATM 0 . . . 2.38 57.8 42 7.62 Yes 76 1.16 Yes 0 0 No -48 0.6 No 46 24.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23616003 - NM_024675 PALB2 0 . . . 2.64 71.21 22 5.26 No 59 1.24 Yes 0 0 No -24 0.66 No 42 92.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89732632 + NM_000314 PTEN 0 . . . 1.07 73.75 17 5.83 Yes -4 0.95 Yes 0 0 No -27 0.54 No 62 32.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90965506 - NM_002485 NBN 0 . . . 1.34 71.8 29 5.38 No -2 0.22 No 0 0 No -22 0.76 Yes 45 40.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68835907 + NM_004360 CDH1 0 . . . 7.41 86.67 28 5.38 No 48 1.1 Yes 0 0 No -28 0.51 No 39 77.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68391897 + NM_133509 RAD51B 0 . . . 9.92 89.22 81 6.34 Yes 72 1.21 Yes 0 0 No -30 0.82 Yes 46 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59922094 - NM_032043 BRIP1 0 . . . 6.69 84.43 39 6.32 Yes 29 1.77 Yes 0 0 No -29 0.58 No 29 70.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59828576 - NM_032043 BRIP1 0 . . . 0.96 60.43 9 3.87 No 61 0.45 No 0 0 No -26 0.63 No 36 45.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131976287 + NM_005732 RAD50 0 . . . 3.05 67.59 17 6.85 Yes 16 1.72 Yes 0 0 No -16 0.82 Yes 28 67.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190675001 + NM_000534 PMS1 0 . . . 4.38 72.88 21 4.9 No 67 -4.39 No 0 0 No -20 0.82 Yes 46 83.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68623007 + NM_133509 RAD51B 0 . . . 4.47 90.16 51 6.83 Yes 72 0.19 No 0 0 No -40 0.65 No 47 63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68797032 + NM_133509 RAD51B 0 . . . 0.14 58.81 16 4.96 No 68 -5.23 No 0 0 No -21 0.61 No 44 50.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23634234 - NM_024675 PALB2 0 . . . 2.36 90.72 13 5.74 Yes 29 0.62 No 0 0 No -23 0.61 No 48 37.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59821186 - NM_032043 BRIP1 0 . . . 5.63 69.48 29 9.17 Yes 46 0.4 No 0 0 No -28 0.41 No 43 50.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33430119 - NM_002878 RAD51D 0 . . . 0.84 59.69 25 7.41 Yes 72 -2.36 No 0 0 No -24 0.78 Yes 51 77.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69057198 + NM_133509 RAD51B 0 . . . 4.75 77.36 17 4.06 No 66 1.54 Yes 0 0 No -23 0.62 No 43 81.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41272185 - NM_007294 BRCA1 0 . . . 7.77 94.32 33 6.07 Yes 25 1.3 Yes 0 0 No -32 0.65 No 44 58.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108103347 + NM_000051 ATM 0 . . . 3.95 81.57 21 7.21 Yes 25 -1.41 No 0 0 No -20 0.8 Yes 52 65.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41218177 - NM_007294 BRCA1 0 . . . 0.87 0 14 4.47 No 73 -3.61 No 0 0 No -20 0.19 No 50 79.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68839820 + NM_133509 RAD51B 0 . . . 1.18 60.08 27 6.85 Yes 64 -1.08 No 0 0 No -26 0.88 Yes 41 76.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94156350 - NM_005591 MRE11 0 . . . 3.38 0 25 4.46 No 16 0.57 No 0 0 No -25 0.59 No 45 79.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6023113 - NM_000535 PMS2 0 . . . 1.66 63.93 23 6 Yes 76 0.05 No 0 0 No -22 0.62 No 48 49.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190695484 + NM_000534 PMS1 0 . . . 1.2 66.78 25 6.28 Yes 58 -3.27 No 0 0 No -24 0.87 Yes 51 44.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23629831 - NM_024675 PALB2 0 . . . 0.73 77.04 22 5.75 Yes 39 0.6 No 0 0 No -31 0.56 No 13 68.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68934356 + NM_133509 RAD51B 0 . . . 0.36 61.51 18 7 Yes 61 -4.78 No 0 0 No -17 0.44 No 42 35.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190654156 + NM_000534 PMS1 0 . . . 5.68 84.73 16 5.24 No 32 0.9 Yes 0 0 No -25 0.69 Yes 38 54.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68507600 + NM_133509 RAD51B 0 . . . 0.99 64.04 15 6.37 Yes 43 0.64 No 0 0 No -34 0.45 No 46 50.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68717243 + NM_133509 RAD51B 0 . . . 6.65 71.85 41 6.45 Yes 33 0.18 No 0 0 No -24 0.86 Yes 45 83.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59829267 - NM_032043 BRIP1 0 . . . 5.24 73.08 28 5.48 No 59 1.1 Yes 0 0 No -27 0.53 No 46 56.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89732467 + NM_000314 PTEN 0 . . . 1.2 0 27 5.39 No 6 0.35 No 0 0 No -58 0.41 No 52 81.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89720090 + NM_000314 PTEN 0 . . . 1.41 74.06 27 5.54 No 4 1.04 Yes 0 0 No -26 0.87 Yes 33 73.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1213401 + NM_000455 STK11 0 . . . 1.46 76.74 15 4.58 No 47 0.53 No 0 0 No -40 0.38 No 48 41.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68905791 + NM_133509 RAD51B 0 . . . 5.06 86.04 11 5 No 12 1.51 Yes 0 0 No -33 0.31 No 46 94.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68455465 + NM_133509 RAD51B 0 . . . 3.46 77.39 19 4.33 No 55 -3.73 No 0 0 No -58 0.5 No 52 46.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47741980 + NM_000251 MSH2 0 . . . 5.3 76.75 21 4.89 No 53 1.19 Yes 0 0 No -20 0.73 Yes 49 42.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68546253 + NM_133509 RAD51B 0 . . . 6.13 76.79 27 5.62 Yes 13 0.76 No 0 0 No -27 0.49 No 45 76.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59857622 - NM_032043 BRIP1 0 . . . 5.2 77.54 23 6.71 Yes 63 0.37 No 0 0 No -22 0.83 Yes 47 93.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7584163 - NM_000546 TP53 0 . . . 2.64 82.73 18 4.8 No 67 -4.96 No 0 0 No -21 0.61 No 43 45.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68533125 + NM_133509 RAD51B 0 . . . 2.14 70.46 23 5.2 No 61 1.45 Yes 0 0 No -22 0.48 No 43 48.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32966135 + NM_000059 BRCA2 0 . . . 0.87 69.17 10 4.8 No 46 1.01 Yes 0 0 No -26 0.48 No 60 57.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75508792 - NM_001040108 MLH3 0 . . . 0.87 68.36 48 6.89 Yes 13 -1.99 No 0 0 No -20 0.69 Yes 20 63.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190667169 + NM_000534 PMS1 0 . . . 1 75.49 44 6.63 Yes 24 0.2 No 0 0 No -37 0.55 No 48 79.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68746246 + NM_133509 RAD51B 0 . . . 3.66 67.16 21 5.18 No 35 0.67 No 0 0 No -21 0.53 No 48 76.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108226103 + NM_000051 ATM 0 . . . 6.21 70.8 24 4.89 No 20 0.44 No 0 0 No -23 0.82 Yes 33 70.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94162051 - NM_005591 MRE11 0 . . . 5.8 73.6 34 7.64 Yes 34 0.34 No 0 0 No -33 0.71 Yes 44 88.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68457626 + NM_133509 RAD51B 0 . . . 3.52 0 23 5.92 Yes 21 0.37 No 0 0 No -26 0.33 No 37 61.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89727682 + NM_000314 PTEN 0 . . . 6.58 74.44 25 4.9 No 15 0.76 No 0 0 No -25 0.66 No 48 48.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68348637 + NM_133509 RAD51B 0 . . . 1.83 64.85 20 6.24 Yes 76 0.33 No 0 0 No -25 0.59 No 39 66.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68518873 + NM_133509 RAD51B 0 . . . 1.57 68.69 18 4.69 No 73 0.04 No 0 0 No -17 0.79 Yes 53 51.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69114985 + NM_133509 RAD51B 0 . . . 2.92 63.7 38 6.22 Yes 69 -5.76 No 0 0 No -37 0.55 No 43 76.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68745211 + NM_133509 RAD51B 0 . . . 0.35 68.13 48 5.23 No 75 0.6 No 0 0 No -35 0.54 No 38 63.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215628261 - NM_000465 BARD1 0 . . . 1.94 66.34 21 5.1 No 60 1.41 Yes 0 0 No -20 0.84 Yes 38 55.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23650739 - NM_024675 PALB2 0 . . . 1.69 86.9 23 6.16 Yes 42 -0.16 No 0 0 No -25 0.59 No 50 66.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6033428 - NM_000535 PMS2 0 . . . 0.84 67.07 34 6.1 Yes -4 0.86 Yes 0 0 No -33 0.41 No 43 72.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56805500 + NM_058216 RAD51C 0 . . . 2.62 79.84 37 7.14 Yes 46 -3.24 No 0 0 No -36 0.58 No 55 33.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1219797 + NM_000455 STK11 0 . . . 1 78.4 48 7.34 Yes 11 1.64 Yes 0 0 No -22 0.57 No 47 72.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94186851 - NM_005591 MRE11 0 . . . 3.57 65.33 14 4.74 No 60 -3.14 No 0 0 No -14 0.36 No 38 60.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645804 - NM_024675 PALB2 0 . . . 6.02 74.24 29 6.07 Yes 9 1.53 Yes 0 0 No -28 0.79 Yes 49 94.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37063448 + NM_000249 MLH1 0 . . . 4.69 74.19 32 5.66 Yes 73 -2.4 No 0 0 No -31 0.7 Yes 43 75.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68856224 + NM_004360 CDH1 0 . . . 11.41 81.43 27 5.21 No 73 0.62 No 0 0 No -26 0.83 Yes 48 70.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108198729 + NM_000051 ATM 0 . . . 6.13 76.05 10 4 No 36 0.28 No 0 0 No -33 0.5 No 33 76.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131906482 + NM_005732 RAD50 0 . . . 3.53 78.04 20 5.57 Yes 74 1.04 Yes 0 0 No -19 0.52 No 44 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29085280 - NM_001005735 CHEK2 0 . . . 14.07 89.6 41 6.07 Yes 59 0.66 No 21 0.59 Yes -40 0.54 No 41 65.81 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 190677062 + NM_000534 PMS1 0 . . . 2.97 63.12 14 3.87 No 69 -5.08 No 0 0 No -30 0.59 No 50 19.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68955924 + NM_133509 RAD51B 0 . . . 2.88 70.22 31 6.43 Yes 76 1.93 Yes 0 0 No -35 0.51 No 45 52.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69151278 + NM_133509 RAD51B 0 . . . 5.84 76.26 17 4.8 No 1 0.45 No 0 0 No -19 0.22 No 47 62.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32916794 + NM_000059 BRCA2 0 . . . 0.77 68.25 24 4.76 No 70 -2.23 No 0 0 No -26 0.74 Yes 42 45.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32927665 + NM_000059 BRCA2 0 . . . 6.83 88.65 28 5.38 No 14 0.47 No 0 0 No -27 0.59 No 41 96.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68403981 + NM_133509 RAD51B 0 . . . 5.31 78.26 23 5.39 No 70 -4.43 No 0 0 No -50 0.54 No 46 88.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68619890 + NM_133509 RAD51B 0 . . . 4.19 73.53 37 4.98 No 71 0.53 No 0 0 No -21 0.74 Yes 42 73.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59913603 - NM_032043 BRIP1 0 . . . 2.58 74.78 30 5.77 Yes 4 0.1 No 0 0 No -25 0.39 No 54 83.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89660804 + NM_000314 PTEN 0 . . . 4.89 73.15 15 4.67 No 66 0.07 No 0 0 No -23 0.46 No 38 78.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89698622 + NM_000314 PTEN 0 . . . 6.74 81.09 39 6.4 Yes 64 0.68 No 0 0 No -22 0.56 No 50 58.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68727805 + NM_133509 RAD51B 0 . . . 0.26 0 13 5.73 Yes 54 0.53 No 0 0 No -26 0.49 No 42 68.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68623232 + NM_133509 RAD51B 0 . . . 0.57 67.12 33 6.36 Yes 56 0.07 No 0 0 No -32 0.62 No 14 2.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69010050 + NM_133509 RAD51B 0 . . . 2.61 72.21 23 6.56 Yes 41 1.15 Yes 0 0 No -22 0.61 No 39 82.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32967985 + NM_000059 BRCA2 0 . . . 4.49 76.1 12 4.9 No 52 0.67 No 0 0 No -25 0.64 No 50 62.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69099799 + NM_133509 RAD51B 0 . . . 4.15 70.85 26 5.1 No 55 1.52 Yes 0 0 No -25 0.85 Yes 40 90.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94191767 - NM_005591 MRE11 0 . . . 1.04 75.84 27 5.39 No 2 0.5 No 0 0 No -26 0.44 No 49 78.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47676127 + NM_000251 MSH2 0 . . . 6.53 75.44 21 6.16 Yes 58 -3.89 No 0 0 No -25 0.53 No 53 58.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89684789 + NM_000314 PTEN 0 . . . 5.54 82.28 29 5.48 No 2 0.61 No 0 0 No -28 0.84 Yes 41 60.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68597334 + NM_133509 RAD51B 0 . . . 4.12 83.46 37 4.62 No 3 0.96 Yes 0 0 No -30 0.54 No 41 68.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84385498 - NM_139076 FAM175A 0 . . . 0.68 73.15 33 5.73 Yes 4 0.68 No 0 0 No -26 0.63 No 45 66.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68450681 + NM_133509 RAD51B 0 . . . 10.22 91.96 20 5.57 Yes 37 0.04 No 0 0 No -19 0.72 Yes 21 54.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7568095 - NM_000546 TP53 0 . . . 0.15 61.36 31 6.08 Yes 71 -4.15 No 0 0 No -26 0.48 No 63 41.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190732368 + NM_000534 PMS1 0 . . . 2.7 69.22 28 5.59 Yes 58 0.28 No 0 0 No -27 0.4 No 46 47.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6044667 - NM_000535 PMS2 0 . . . 0.38 71.78 31 5.52 No 65 1.11 Yes 0 0 No -24 0.73 Yes 54 52.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29136951 - NM_001005735 CHEK2 0 . . . 0.42 74.73 36 7.68 Yes 19 -3.36 No 0 0 No -32 0.32 No 56 29.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59935647 - NM_032043 BRIP1 0 . . . 7.2 79.27 20 5.1 No 47 0.37 No 0 0 No -19 0.72 Yes 53 44.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68900631 + NM_133509 RAD51B 0 . . . 1.97 71.64 36 6.16 Yes 62 0.67 No 0 0 No -35 0.91 Yes 35 43.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68338155 + NM_133509 RAD51B 0 . . . 0.77 67.04 14 5.92 Yes 46 -2.67 No 0 0 No -34 0.61 No 48 44.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48034405 + NM_000179 MSH6 0 . . . 3.67 83.78 16 3.73 No 37 -2.08 No 0 0 No -22 0.46 No 47 45.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45804227 - NM_001048171 MUTYH 0 . . . 2.81 0 25 4.9 No 14 0.68 No 0 0 No -19 0.48 No 44 64.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59914958 - NM_032043 BRIP1 0 . . . 1.69 65.39 39 8.04 Yes 46 0.56 No 0 0 No -38 0.51 No 30 67.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47700734 + NM_000251 MSH2 0 . . . 2.01 71.11 42 6.51 Yes 49 1.1 Yes 0 0 No -34 0.45 No 52 45.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68937967 + NM_133509 RAD51B 0 . . . 4.59 73.7 13 5 No 69 -4.15 No 0 0 No -21 0.66 No 52 49.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68787417 + NM_133509 RAD51B 0 . . . 1 68.24 35 6.32 Yes 14 1.47 Yes 0 0 No -34 0.76 Yes 44 95.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68924337 + NM_133509 RAD51B 0 . . . 2.16 83.78 27 4.65 No 8 1.73 Yes 0 0 No -29 0.56 No 50 87.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47774350 + NM_000251 MSH2 0 . . . 7.78 77.88 21 4.9 No 57 0.82 Yes 0 0 No -20 0.53 No 45 51.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68801618 + NM_133509 RAD51B 0 . . . 4.4 80.17 18 5.19 No 58 -2.56 No 0 0 No -17 0.5 No 44 58.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47683778 + NM_000251 MSH2 0 . . . 0.15 0 26 4.12 No 6 1.49 Yes 0 0 No -25 0.55 No 40 67.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89648561 + NM_000314 PTEN 0 . . . 3.49 71.53 31 5.57 Yes 35 0.18 No 0 0 No -30 0.79 Yes 33 66.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190672677 + NM_000534 PMS1 0 . . . 2.11 73.89 30 5.83 Yes 72 1.33 Yes 0 0 No -29 0.85 Yes 54 36.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33436375 - NM_002878 RAD51D 0 . . . 0.88 60.66 20 5.46 No 44 -4.05 No 0 0 No -23 0.76 Yes 41 80.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33424816 - NM_002878 RAD51D 0 . . . 2.33 74.08 34 4.1 No 51 2.01 Yes 0 0 No -23 0.92 Yes 49 96.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68452287 + NM_133509 RAD51B 0 . . . 0.03 77.15 20 5.1 No 76 0.51 No 0 0 No -19 0.75 Yes 46 45.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33442335 - NM_002878 RAD51D 0 . . . 7.08 84.88 38 6.05 Yes 30 0.48 No 0 0 No -37 0.76 Yes 51 46.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108106778 + NM_000051 ATM 0 . . . 1.48 72.15 18 5.38 No 59 2.13 Yes 0 0 No -26 0.43 No 49 33.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21976522 - NM_000077 CDKN2A 0 . . . 0.81 75.18 10 3.44 No 33 1.56 Yes 0 0 No -27 0.85 Yes 25 57.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69095576 + NM_133509 RAD51B 0 . . . 3.13 71.02 21 3.86 No 15 1.21 Yes 0 0 No -21 0.89 Yes 50 48.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68815692 + NM_133509 RAD51B 0 . . . 2.86 0 35 7.02 Yes -1 -2.28 No 0 0 No -34 0.52 No 42 85.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68791622 + NM_004360 CDH1 0 . . . 1.12 63.63 50 7.27 Yes 12 0.99 Yes 0 0 No -19 0.32 No 46 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32962374 + NM_000059 BRCA2 0 . . . 1.32 76 27 7.16 Yes 76 1.48 Yes 0 0 No -26 0.81 Yes 50 77.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108215230 + NM_000051 ATM 0 . . . 7.34 79.71 49 6.93 Yes 67 -2.69 No 0 0 No -30 0.75 Yes 44 47.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41272918 - NM_007294 BRCA1 0 . . . 3.45 85.02 16 4.19 No 3 1.16 Yes 0 0 No -19 0.54 No 55 47.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41215680 - NM_007294 BRCA1 0 . . . 7.01 78.12 20 5.1 No 67 1.28 Yes 0 0 No -22 0.44 No 35 54.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32937932 + NM_000059 BRCA2 0 . . . 5.79 78.12 19 4.47 No 51 -4.45 No 0 0 No -18 0.72 Yes 46 56.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68441938 + NM_133509 RAD51B 0 . . . 0.02 73.29 34 5.82 Yes 4 0.11 No 0 0 No -27 0.37 No 47 61.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90954852 - NM_002485 NBN 0 . . . 1.7 70.99 13 5.12 No 11 0.72 No 0 0 No -33 0.53 No 47 76.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94186341 - NM_005591 MRE11 0 . . . 1.72 68.3 37 6.55 Yes 44 -4.13 No 0 0 No -27 0.58 No 31 33.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47740420 + NM_000251 MSH2 0 . . . 4.64 78.12 26 6.29 Yes 16 1.25 Yes 0 0 No -26 0.39 No 42 95.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68812510 + NM_004360 CDH1 0 . . . 1.42 77.44 21 5.79 Yes NA NA NA 0 0 No -18 0.62 No 51 33.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68865300 + NM_004360 CDH1 0 . . . 2.71 65.03 28 5.29 No 67 1.57 Yes 0 0 No -60 0.53 No 45 74.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47724130 + NM_000251 MSH2 0 . . . 0.86 73.01 26 5.4 No 24 1.21 Yes 0 0 No -25 0.82 Yes 34 81.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108211323 + NM_000051 ATM 0 . . . 4.26 77.93 24 5.86 Yes 40 0.62 No 0 0 No -28 0.77 Yes 23 45.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190713322 + NM_000534 PMS1 0 . . . 3.09 69.51 27 6.4 Yes 61 0.82 Yes 0 0 No -26 0.55 No 59 36.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68440383 + NM_133509 RAD51B 0 . . . 2.95 70.06 18 4.9 No 20 0.98 Yes 0 0 No -26 0.48 No 27 66.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108184763 + NM_000051 ATM 0 . . . 5.33 77.93 11 5.39 No 53 1.36 Yes 0 0 No -22 0.55 No 44 77.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89635164 + NM_000314 PTEN 0 . . . 2.19 81.29 20 7.14 Yes 20 1.4 Yes 0 0 No -19 0.6 No 38 77.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94155264 - NM_005591 MRE11 0 . . . 3.32 0 21 5 No 13 0.65 No 0 0 No -20 0.83 Yes 45 51.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68458272 + NM_133509 RAD51B 0 . . . 0.13 0 10 3.87 No 68 -5.25 No 0 0 No -34 0.38 No 32 51.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59930002 - NM_032043 BRIP1 0 . . . 3.4 84 15 4.71 No 2 1.51 Yes 0 0 No -30 0.83 Yes 21 56.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69005654 + NM_133509 RAD51B 0 . . . 8.65 78.4 22 6.85 Yes 54 2.17 Yes 0 0 No -21 0.96 Yes 45 79.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47771253 + NM_000251 MSH2 0 . . . 6.58 81.8 34 7.55 Yes 6 1.39 Yes 0 0 No -33 0.65 No 19 48.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59767234 - NM_032043 BRIP1 0 . . . 0.19 70.66 17 5.57 Yes 65 1.1 Yes 0 0 No -16 0.49 No 54 34.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190694632 + NM_000534 PMS1 0 . . . 3.64 73.52 56 6.84 Yes 63 1.41 Yes 0 0 No -23 0.47 No 44 59.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59812167 - NM_032043 BRIP1 0 . . . 1.9 75.68 20 4.57 No 9 0.85 Yes 0 0 No -19 0.96 Yes 49 47.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68788669 + NM_004360 CDH1 0 . . . 0.44 0 37 6.02 Yes 55 0.73 No 0 0 No -25 0.34 No 46 41.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68308027 + NM_133509 RAD51B 0 . . . 2.46 0 51 6.71 Yes 52 1.02 Yes 0 0 No -22 0.69 Yes 26 87.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37044394 + NM_000249 MLH1 0 . . . 8.46 89.92 15 5.83 Yes 57 0.81 Yes 0 0 No -21 0.3 No 49 42.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69145647 + NM_133509 RAD51B 0 . . . 7.43 86.57 33 4.68 No 34 0.67 No 0 0 No -28 0.31 No 48 86.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32919700 + NM_000059 BRCA2 0 . . . 0.97 0 17 4.66 No 74 -4.38 No 0 0 No -19 0.49 No 45 22.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108211046 + NM_000051 ATM 0 . . . 5.93 75.86 18 4.9 No 46 1.08 Yes 0 0 No -17 0.53 No 12 72.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68991369 + NM_133509 RAD51B 0 . . . 4.63 77.48 21 7.14 Yes 16 1.42 Yes 0 0 No -20 0.87 Yes 42 89.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105201212 + NM_021930 RINT1 0 . . . 4.12 87.6 31 6.08 Yes 2 1.28 Yes 0 0 No -18 0.53 No 43 31.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84397523 - NM_139076 FAM175A 0 . . . 6.93 81.35 17 4.47 No 51 1.73 Yes 0 0 No -27 0.44 No 37 89.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68749249 + NM_133509 RAD51B 0 . . . 0.95 0 26 5.65 Yes 9 1.01 Yes 0 0 No -25 0.42 No 45 71.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6016375 - NM_000535 PMS2 0 . . . 1.63 71.55 37 6.38 Yes 0 0.34 No 0 0 No -22 0.9 Yes 40 52.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52441186 - NM_004656 BAP1 0 . . . 3.25 70.16 16 4.69 No -2 0.7 No 0 0 No -38 0.61 No 44 67.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33434287 - NM_002878 RAD51D 0 . . . 0.08 69.3 13 4.36 No -2 0.68 No 0 0 No -32 0.78 Yes 51 84.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68961711 + NM_133509 RAD51B 0 . . . 3.68 74.86 34 8.21 Yes 31 1.91 Yes 0 0 No -33 0.4 No 46 75.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47734087 + NM_000251 MSH2 0 . . . 1.06 74.62 36 5.55 No 59 -4.61 No 0 0 No -25 0.5 No 48 47.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68783622 + NM_004360 CDH1 0 . . . 4.15 0 25 4.9 No 58 0.16 No 0 0 No -24 0.92 Yes 33 48.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48010149 + NM_000179 MSH6 0 . . . 5.98 76.95 22 5.11 No 23 1.1 Yes 0 0 No -25 0.6 No 49 68.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59918598 - NM_032043 BRIP1 0 . . . 0 65.55 17 5.39 No 61 -0.9 No 0 0 No -27 0.45 No 28 72.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32935091 + NM_000059 BRCA2 0 . . . 1.3 68.35 21 5.66 Yes -4 0.18 No 0 0 No -20 0.81 Yes 47 52.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47759257 + NM_000251 MSH2 0 . . . 1.1 69.38 13 4.77 No 19 0.13 No 0 0 No -20 0.56 No 31 56.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215660732 - NM_000465 BARD1 0 . . . 6.15 81.81 25 5 No 59 -4.62 No 0 0 No -24 0.84 Yes 50 31.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41247835 - NM_007294 BRCA1 0 . . . 3.08 78.83 17 6.45 Yes 65 -4.51 No 0 0 No -16 0.37 No 45 71.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108162496 + NM_000051 ATM 0 . . . 2.09 76.12 31 5.66 Yes 44 -1.74 No 0 0 No -30 0.74 Yes 52 62.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68818497 + NM_133509 RAD51B 0 . . . 5.82 78.89 18 4.9 No 57 -2.83 No 0 0 No -25 0.67 Yes 43 63.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56793844 + NM_058216 RAD51C 0 . . . 2.97 83.28 32 6.55 Yes 12 1.07 Yes 0 0 No -31 0.87 Yes 41 56.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68405369 + NM_133509 RAD51B 0 . . . 5.57 0 20 7.14 Yes 17 0.87 Yes 0 0 No -19 0.59 No 45 84.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59896544 - NM_032043 BRIP1 0 . . . 2.2 84.41 16 5.02 No 13 0.19 No 0 0 No -20 0.7 Yes 42 62.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68774343 + NM_004360 CDH1 0 . . . 7.12 84.9 26 5.63 Yes 7 1.3 Yes 0 0 No -25 0.68 Yes 51 69.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48030453 + NM_000179 MSH6 0 . . . 0.34 61.2 17 5.29 No 28 0.12 No 0 0 No -16 0.39 No 61 26.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68812864 + NM_004360 CDH1 0 . . . 2.44 68.44 21 4.93 No 22 -3.08 No 0 0 No -20 0.77 Yes 46 41.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59770127 - NM_032043 BRIP1 0 . . . 5.49 69.47 29 5.56 Yes 54 0.92 Yes 0 0 No -28 0.84 Yes 46 56.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68404637 + NM_133509 RAD51B 0 . . . 9.4 90.13 26 4.99 No 15 1.47 Yes 0 0 No -18 0.6 No 43 81.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68437513 + NM_133509 RAD51B 0 . . . 8.83 88.57 28 5.35 No 5 0.95 Yes 0 0 No -27 0.55 No 49 78.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29102285 - NM_001005735 CHEK2 0 . . . 1.83 64.04 49 7.57 Yes 58 1.01 Yes 0 0 No -41 0.59 No 26 72.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59935461 - NM_032043 BRIP1 0 . . . 3.19 68.85 13 5 No 54 -4.59 No 0 0 No -24 0.28 No 46 60.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59928291 - NM_032043 BRIP1 0 . . . 0.55 73.51 32 7.8 Yes 65 0.8 Yes 0 0 No -31 0.42 No 50 76.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47745543 + NM_000251 MSH2 0 . . . 7.51 78.17 25 5.57 Yes 1 1.19 Yes 0 0 No -24 0.85 Yes 46 52.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68855435 + NM_133509 RAD51B 0 . . . 6.15 82.24 23 5.26 No 51 1.21 Yes 0 0 No -25 0.88 Yes 51 63.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108146675 + NM_000051 ATM 0 . . . 2.98 73.36 31 6.47 Yes 44 0.04 No 0 0 No -30 0.73 Yes 48 24.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89725597 + NM_000314 PTEN 0 . . . 1.51 62.18 25 5.38 No 38 0.89 Yes 0 0 No -22 0.5 No 28 71.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68908823 + NM_133509 RAD51B 0 . . . 1.87 68.36 14 4.72 No 75 -3.38 No 0 0 No -20 0.61 No 49 83.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68391833 + NM_133509 RAD51B 0 . . . 6.63 83.94 20 5.65 Yes 8 1.24 Yes 0 0 No -19 0.54 No 40 59.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59792966 - NM_032043 BRIP1 0 . . . 2.12 70.92 23 5 No 0 0.14 No 0 0 No -22 0.79 Yes 53 91.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90978540 - NM_002485 NBN 0 . . . 4.33 77.81 18 5.74 Yes 3 0.84 Yes 0 0 No -26 0.81 Yes 36 63.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89689178 + NM_000314 PTEN 0 . . . 5.33 75.82 13 3.8 No 44 1.73 Yes 0 0 No -42 0.7 Yes 14 65.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94158598 - NM_005591 MRE11 0 . . . 1.42 70.86 17 5.79 Yes 53 0.16 No 0 0 No -30 0.37 No 39 71.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6032809 - NM_000535 PMS2 0 . . . 3.51 82.03 22 4.97 No 33 1.13 Yes 0 0 No -21 0.93 Yes 39 42.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131966504 + NM_005732 RAD50 0 . . . 4.2 71.51 13 5.42 No 22 0.51 No 0 0 No -50 0.32 No 46 96.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59865817 - NM_032043 BRIP1 0 . . . 3.98 82.13 43 7.94 Yes 74 1.65 Yes 0 0 No -31 0.58 No 54 44.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68844752 + NM_004360 CDH1 0 . . . 0.67 0 20 5.34 No 70 -4.64 No 0 0 No -23 0.65 No 51 42.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89678824 + NM_000314 PTEN 0 . . . 2.85 83.02 23 5.39 No 5 -1.04 No 0 0 No -53 0.44 No 46 62.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207235 - NM_007294 BRCA1 0 . . . 2.92 79.2 17 5.31 No 14 1.3 Yes 0 0 No -26 0.49 No 40 90.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75506699 - NM_001040108 MLH3 0 . . . 0.12 68.86 31 5.74 Yes 76 1.24 Yes 0 0 No -30 0.58 No 17 42.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94190913 - NM_005591 MRE11 0 . . . 4.7 78.48 10 3.89 No 69 1.69 Yes 0 0 No -9 0.29 No 47 51.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21970829 - NM_000077 CDKN2A 0 . . . 2.11 0 26 5 No 50 0.65 No 0 0 No -52 0.75 Yes 47 90.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108154048 + NM_000051 ATM 0 . . . 3.09 76.64 30 5.43 No 20 0.62 No 0 0 No -29 0.44 No 52 72.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84404300 - NM_139076 FAM175A 0 . . . 0.88 69.66 22 6.69 Yes 62 -4.72 No 0 0 No -25 0.65 No 52 38.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694674 + NM_000534 PMS1 0 . . . 8.41 87 21 6.26 Yes 23 1.74 Yes 0 0 No -20 0.72 Yes 35 89.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68851086 + NM_004360 CDH1 0 . . . 4.16 69.75 24 6 Yes 28 0.62 No 0 0 No -23 0.69 Yes 11 58.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68404224 + NM_133509 RAD51B 0 . . . 4.81 80.64 33 6 Yes 54 0.89 Yes 0 0 No -32 0.77 Yes 45 83.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68800998 + NM_004360 CDH1 0 . . . 4.69 82.6 26 5.82 Yes 74 0.11 No 0 0 No -30 0.72 Yes 45 86.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69025091 + NM_133509 RAD51B 0 . . . 6.03 82.11 18 4.69 No 43 1.44 Yes 0 0 No -38 0.59 No 15 41.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32954663 + NM_000059 BRCA2 0 . . . 3.58 86.46 14 4.39 No 48 0.62 No 0 0 No -24 0.45 No 48 48.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68882698 + NM_133509 RAD51B 0 . . . 7.05 92.06 24 5.29 No 62 1.35 Yes 0 0 No -21 0.79 Yes 47 65.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41226113 - NM_007294 BRCA1 0 . . . 0.41 73.41 39 6.45 Yes 31 1.07 Yes 0 0 No -38 0.68 Yes 43 52.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108145234 + NM_000051 ATM 0 . . . 5.81 65.19 38 5.4 No 26 0.43 No 0 0 No -21 0.42 No 32 75.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59818115 - NM_032043 BRIP1 0 . . . 0.67 62.7 17 4.69 No 17 1.37 Yes 0 0 No -21 0.42 No 50 57.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33430996 - NM_002878 RAD51D 0 . . . 1.08 84.22 30 7.76 Yes 33 0.5 No 0 0 No -29 0.76 Yes 50 57.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68301488 + NM_133509 RAD51B 0 . . . 2.73 65.2 17 6.48 Yes 35 -4.25 No 0 0 No -32 0.37 No 49 59.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89728311 + NM_000314 PTEN 0 . . . 1.32 0 36 5.74 Yes 41 0.22 No 0 0 No -35 0.94 Yes 47 61.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68942128 + NM_133509 RAD51B 0 . . . 1.01 62.72 25 5.38 No 58 -4.79 No 0 0 No -24 0.65 No 43 69.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47711893 + NM_000251 MSH2 0 . . . 2.44 67.26 37 6.08 Yes 65 0.41 No 0 0 No -36 0.42 No 44 61.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215588892 - NM_000465 BARD1 0 . . . 1.74 0 17 5.29 No 13 0.78 Yes 0 0 No -16 0.45 No 45 58.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68621664 + NM_133509 RAD51B 0 . . . 4.65 77.9 18 4.27 No 17 0.97 Yes 0 0 No -26 0.46 No 41 80.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69121766 + NM_133509 RAD51B 0 . . . 1.05 77.23 28 7.18 Yes 71 -6.48 No 0 0 No -27 0.52 No 46 50.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47794902 + NM_000251 MSH2 0 . . . 1.01 71.18 25 4.37 No 53 0.22 No 0 0 No -24 0.82 Yes 44 47.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215597913 - NM_000465 BARD1 0 . . . 4.13 67.18 17 4.36 No 49 -5.54 No 0 0 No -31 0.8 Yes 44 25.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1208873 + NM_000455 STK11 0 . . . 0.28 78.4 15 4.58 No 11 1.67 Yes 0 0 No -22 0.75 Yes 47 76.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68309922 + NM_133509 RAD51B 0 . . . 3.81 75.37 26 5.1 No 70 1.96 Yes 0 0 No -25 0.59 No 16 38.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215626885 - NM_000465 BARD1 0 . . . 1.99 69.34 28 5.38 No 44 0.46 No 0 0 No -27 0.85 Yes 38 71.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68710837 + NM_133509 RAD51B 0 . . . 5.62 66.04 19 4.9 No 29 0.11 No 0 0 No -18 0.56 No 29 60.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59889310 - NM_032043 BRIP1 0 . . . 2.37 83.04 22 6.86 Yes 73 0.19 No 0 0 No -21 0.96 Yes 37 48.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68940045 + NM_133509 RAD51B 0 . . . 6.45 77.84 23 5.74 Yes 48 0.64 No 0 0 No -22 0.7 Yes 48 52.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68594976 + NM_133509 RAD51B 0 . . . 10.04 79.33 18 4.34 No 13 1.1 Yes 0 0 No -17 0.44 No 44 82.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29106738 - NM_001005735 CHEK2 0 . . . 3.83 73.52 26 7.38 Yes 73 -5.23 No 0 0 No -26 0.9 Yes 45 88.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41271868 - NM_007294 BRCA1 0 . . . 4.17 73.24 59 6.02 Yes 50 0.63 No 0 0 No -25 0.79 Yes 53 82.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59792803 - NM_032043 BRIP1 0 . . . 3.7 82.78 15 5.1 No 30 -2.27 No 0 0 No -19 0.64 No 49 27.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32904052 + NM_000059 BRCA2 0 . . . 0.71 61.11 18 5.88 Yes 64 -4.86 No 0 0 No -28 0.74 Yes 48 66.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131960342 + NM_005732 RAD50 0 . . . 1.36 67.3 41 6.53 Yes 33 0.26 No 0 0 No -41 0.56 No 46 61.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41278418 - NM_007294 BRCA1 0 . . . 2.62 76.47 10 4 No 58 1.84 Yes 0 0 No -31 0.9 Yes 17 61.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7591575 - NM_000546 TP53 0 . . . 0.04 71.11 11 4.9 No 8 1.33 Yes 0 0 No -32 0.5 No 50 80.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108176803 + NM_000051 ATM 0 . . . 8.84 83.14 22 4.73 No 63 1.56 Yes 0 0 No -21 0.96 Yes 46 89.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89724467 + NM_000314 PTEN 0 . . . 4.33 66.89 12 4.9 No 24 1.13 Yes 0 0 No -26 0.91 Yes 34 50.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108141059 + NM_000051 ATM 0 . . . 3.55 74.6 20 5.48 No 66 1.08 Yes 0 0 No -20 0.4 No 37 68.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47745284 + NM_000251 MSH2 0 . . . 6.19 87.72 18 4.63 No 14 0.05 No 0 0 No -27 0.84 Yes 44 81.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215600381 - NM_000465 BARD1 0 . . . 0.58 67.03 29 5.56 Yes 49 0 No 0 0 No -28 0.63 No 39 51.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69031900 + NM_133509 RAD51B 0 . . . 7.05 91.26 26 5.39 No 25 0.43 No 0 0 No -25 0.79 Yes 47 64.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59859646 - NM_032043 BRIP1 0 . . . 4.71 84.22 12 5.46 No 33 1 Yes 0 0 No -23 0.52 No 50 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47654872 + NM_000251 MSH2 0 . . . 2.61 74.58 19 4.24 No 75 -2.77 No 0 0 No -18 0.33 No 35 61.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190734048 + NM_000534 PMS1 0 . . . 3.96 70.06 23 5.39 No 17 1.55 Yes 0 0 No -22 0.56 No 41 97.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68340994 + NM_133509 RAD51B 0 . . . 5.47 80.8 28 6.27 Yes 60 1.88 Yes 0 0 No -23 0.53 No 50 53.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68986082 + NM_133509 RAD51B 0 . . . 1.69 66.37 16 4.43 No 65 0.13 No 0 0 No -27 0.75 Yes 48 67.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108125557 + NM_000051 ATM 0 . . . 2.81 85.02 16 4.69 No 4 0.62 No 0 0 No -21 0.47 No 54 50.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69068454 + NM_133509 RAD51B 0 . . . 9.06 86.37 56 5.98 Yes 63 0.9 Yes 0 0 No -33 0.72 Yes 32 25.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68871294 + NM_133509 RAD51B 0 . . . 5.4 73.07 18 5.87 Yes 19 1.08 Yes 0 0 No -31 0.56 No 43 95.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68600510 + NM_133509 RAD51B 0 . . . 5.1 76.96 23 4.83 No 71 0.96 Yes 0 0 No -22 0.76 Yes 45 48.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32938953 + NM_000059 BRCA2 0 . . . 1.52 71.81 19 4.16 No 2 1.14 Yes 0 0 No -49 0.3 No 40 68.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68720886 + NM_133509 RAD51B 0 . . . 6.67 93.14 23 6 Yes 23 0.23 No 0 0 No -22 0.81 Yes 35 75.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56792264 + NM_058216 RAD51C 0 . . . 0.78 0 25 6.72 Yes 35 0.47 No 0 0 No -24 0.65 No 23 54.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94178517 - NM_005591 MRE11 0 . . . 3.19 65.18 24 5.48 No 63 -3.21 No 0 0 No -23 0.87 Yes 48 67.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90993293 - NM_002485 NBN 0 . . . 5.21 79.29 56 5.5 No 49 1.06 Yes 0 0 No -27 0.38 No 50 91.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59786389 - NM_032043 BRIP1 0 . . . 2.56 76.39 15 5.38 No 10 1.52 Yes 0 0 No -19 0.65 No 48 92.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68654039 + NM_133509 RAD51B 0 . . . 4.21 82.43 17 4.24 No 74 -5.58 No 0 0 No -17 0.33 No 49 61.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21995157 - NM_000077 CDKN2A 0 . . . 3.25 69.75 21 5.91 Yes NA NA NA 0 0 No -20 0.72 Yes 55 36.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47659710 + NM_000251 MSH2 0 . . . 6.87 74.57 21 5.2 No 38 0.01 No 0 0 No -20 0.48 No 20 58.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89633896 + NM_000314 PTEN 0 . . . 3.26 82.11 23 5.19 No 27 1.64 Yes 0 0 No -22 0.53 No 52 44.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104175084 - NM_001100119 XRCC3 0 . . . 3.16 78 22 7.06 Yes NA NA NA 0 0 No -21 0.82 Yes 55 56.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68899699 + NM_133509 RAD51B 0 . . . 3.58 72.51 23 5.29 No 9 0.91 Yes 0 0 No -22 0.57 No 49 90.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89711413 + NM_000314 PTEN 0 . . . 7.95 85.52 20 5.96 Yes 30 1.76 Yes 0 0 No -19 0.85 Yes 39 59.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105197239 + NM_021930 RINT1 0 . . . 6.23 82.85 22 4.9 No 18 0.87 Yes 0 0 No -21 0.66 Yes 40 51.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68627515 + NM_133509 RAD51B 0 . . . 0.48 58.82 34 5.13 No 46 1.24 Yes 0 0 No -26 0.85 Yes 43 25.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21982774 - NM_000077 CDKN2A 0 . . . 3.03 73.44 28 6.88 Yes 62 0.91 Yes 0 0 No -27 0.67 Yes 38 60.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68810126 + NM_004360 CDH1 0 . . . 0.71 72.41 29 5.92 Yes 63 1.34 Yes 0 0 No -28 0.85 Yes 39 80.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190651036 + NM_000534 PMS1 0 . . . 1.96 72.3 22 4.9 No 60 -4.48 No 0 0 No -21 0.92 Yes 50 52.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68796257 + NM_004360 CDH1 0 . . . 8.22 87.42 17 5.24 No 73 -0.17 No 0 0 No -25 0.77 Yes 31 63.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41255906 - NM_007294 BRCA1 0 . . . 5.84 82 14 3.86 No 58 1.16 Yes 0 0 No -25 0.67 Yes 55 43.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68808005 + NM_133509 RAD51B 0 . . . 4.82 74.22 13 4.69 No 0 0.24 No 0 0 No -21 0.76 Yes 53 36.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94165729 - NM_005591 MRE11 0 . . . 3.01 68.06 47 7.09 Yes 20 1.7 Yes 0 0 No -23 0.73 Yes 38 60.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94198482 - NM_005591 MRE11 0 . . . 0.1 63.64 12 4.24 No 43 0.23 No 0 0 No -28 0.42 No 43 82.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108144775 + NM_000051 ATM 0 . . . 7.27 81.54 39 7.41 Yes 4 0.66 No 0 0 No -38 0.72 Yes 51 51.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460950 + NM_133509 RAD51B 0 . . . 5.59 83.39 26 5.86 Yes 6 2.24 Yes 0 0 No -25 0.47 No 52 66.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68301222 + NM_133509 RAD51B 0 . . . 8.25 81.23 13 6.56 Yes 24 0.96 Yes 0 0 No -32 0.68 Yes 42 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215676216 - NM_000465 BARD1 0 . . . 0.35 70.33 58 7.79 Yes 70 1.33 Yes 0 0 No -37 0.58 No 34 51.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84387191 - NM_139076 FAM175A 0 . . . 0.94 0 17 5.05 No 63 -0.78 No 0 0 No -25 0.78 Yes 40 58.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68468655 + NM_133509 RAD51B 0 . . . 4.99 90.18 28 4.25 No 48 0.59 No 0 0 No -27 0.7 Yes 46 59.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68816667 + NM_133509 RAD51B 0 . . . 6.43 84.65 29 6.39 Yes 53 -3.59 No 0 0 No -26 0.56 No 49 55.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59811162 - NM_032043 BRIP1 0 . . . 1.32 74.1 18 4.79 No 25 0.97 Yes 0 0 No -17 0.51 No 33 93.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68676209 + NM_133509 RAD51B 0 . . . 4.08 0 21 5.09 No 55 0.83 Yes 0 0 No -20 0.54 No 56 32.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215634738 - NM_000465 BARD1 0 . . . 2.09 69.42 37 7.54 Yes 8 0.96 Yes 0 0 No -36 0.66 No 50 45.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69128109 + NM_133509 RAD51B 0 . . . 3.81 81.65 21 5.74 Yes 57 -0.4 No 0 0 No -20 0.84 Yes 42 78.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59837695 - NM_032043 BRIP1 0 . . . 8.28 89.8 33 5.34 No 23 1.07 Yes 0 0 No -32 0.8 Yes 44 85.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47749903 + NM_000251 MSH2 0 . . . 1.69 0 27 5.31 No 7 0.75 No 0 0 No -27 0.59 No 51 85.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68816058 + NM_004360 CDH1 0 . . . 5.23 79.46 22 6.63 Yes 38 0.23 No 0 0 No -21 0.59 No 34 64.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47639343 + NM_000251 MSH2 0 . . . 2.2 78.48 18 4.9 No 70 0.74 No 0 0 No -17 0.58 No 46 82.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105204248 + NM_021930 RINT1 0 . . . 0.43 0 34 5.81 Yes 75 1.33 Yes 0 0 No -23 0.5 No 50 74.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75488725 - NM_001040108 MLH3 0 . . . 4.33 79.56 38 9.42 Yes 17 0.55 No 0 0 No -37 0.88 Yes 50 70.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69045465 + NM_133509 RAD51B 0 . . . 0.41 77.98 18 4.9 No 75 -5.98 No 0 0 No -17 0.55 No 20 33.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68418312 + NM_133509 RAD51B 0 . . . 0.73 68.63 51 8.34 Yes 56 0.23 No 0 0 No -23 0.71 Yes 38 64.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68417138 + NM_133509 RAD51B 0 . . . 9.58 85.36 27 5.75 Yes 35 -1.05 No 0 0 No -22 0.74 Yes 47 86.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89727007 + NM_000314 PTEN 0 . . . 3.7 62.87 32 6.54 Yes 18 0.92 Yes 0 0 No -31 0.52 No 49 66.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33425385 - NM_002878 RAD51D 0 . . . 1.45 77.18 23 5.99 Yes 72 0.37 No 0 0 No -22 0.56 No 37 51.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190664190 + NM_000534 PMS1 0 . . . 0.54 0 28 6.78 Yes 18 1.24 Yes 0 0 No -31 0.56 No 46 41.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68655623 + NM_133509 RAD51B 0 . . . 8.89 88.51 42 7.42 Yes 40 1.63 Yes 0 0 No -38 0.47 No 35 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29116699 - NM_001005735 CHEK2 0 . . . 2.47 79.64 32 5.71 Yes 76 -2.62 No 0 0 No -31 0.47 No 51 64.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68817271 + NM_004360 CDH1 0 . . . 1.82 76.63 39 4.47 No 67 -4.96 No 0 0 No -28 0.66 Yes 48 84.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59873214 - NM_032043 BRIP1 0 . . . 1.97 56.28 29 5.57 Yes 73 -5.96 No 0 0 No -28 0.87 Yes 44 24.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21968912 - NM_000077 CDKN2A 0 . . . 4.05 80.1 15 4.84 No 52 -2.88 No 0 0 No -26 0.25 No 50 73.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152349247 - NM_005431 XRCC2 0 . . . 10.97 87.64 20 6.08 Yes 28 0.86 Yes 0 0 No -19 0.9 Yes 37 50.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32945742 + NM_000059 BRCA2 0 . . . 4.06 75.78 20 5.57 Yes 50 0.82 Yes 0 0 No -19 0.73 Yes 52 69.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68839415 + NM_133509 RAD51B 0 . . . 1.21 77.08 42 5.76 Yes 44 0.18 No 0 0 No -25 0.49 No 38 30.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47803900 + NM_000251 MSH2 0 . . . 4.98 76.28 20 5.1 No 0 0.89 Yes 0 0 No -19 0.82 Yes 48 34.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59859425 - NM_032043 BRIP1 0 . . . 4.19 89.23 48 8.04 Yes 45 0.39 No 0 0 No -30 0.59 No 52 40.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37050329 + NM_000249 MLH1 0 . . . 2.82 76.42 14 5.37 No 63 -1.57 No 0 0 No -17 0.46 No 19 82.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68834008 + NM_133509 RAD51B 0 . . . 5.34 75.53 14 5.08 No 26 0.66 No 0 0 No -22 0.69 Yes 42 57.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89713952 + NM_000314 PTEN 0 . . . 2.7 82.48 25 4.74 No 57 -3.82 No 0 0 No -22 0.74 Yes 43 57.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68621038 + NM_133509 RAD51B 0 . . . 1.98 74.82 28 5.57 Yes 7 1.16 Yes 0 0 No -27 0.64 No 40 47.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52444792 - NM_004656 BAP1 0 . . . 3.82 75.37 21 5.66 Yes 10 1.33 Yes 0 0 No -20 0.63 No 48 94.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29102188 - NM_001005735 CHEK2 0 . . . 2.67 84.22 41 6.5 Yes 8 -0.24 No 0 0 No -30 0.49 No 50 73.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68795164 + NM_004360 CDH1 0 . . . 5.01 68.14 33 7.55 Yes 75 0.17 No 0 0 No -21 0.42 No 39 77.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68305554 + NM_133509 RAD51B 0 . . . 0.24 69.14 25 4.92 No 2 1.02 Yes 0 0 No -29 0.36 No 37 26.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190703359 + NM_000534 PMS1 0 . . . 5.77 77.8 31 5.56 Yes 52 0.98 Yes 0 0 No -30 0.79 Yes 45 49.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41201535 - NM_007294 BRCA1 0 . . . 6.35 88.76 26 6.08 Yes 72 -4.17 No 0 0 No -25 0.8 Yes 47 41.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68500770 + NM_133509 RAD51B 0 . . . 10.2 82.38 19 5.64 Yes 8 0.93 Yes 0 0 No -25 0.63 No 39 70.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68387789 + NM_133509 RAD51B 0 . . . 2.53 78.54 23 4.8 No 39 -1.25 No 0 0 No -22 0.86 Yes 49 73.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94200936 - NM_005591 MRE11 0 . . . 1.94 72.62 14 4.9 No 28 0.57 No 0 0 No -17 0.32 No 40 56.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68575467 + NM_133509 RAD51B 0 . . . 4.3 73.01 32 5.92 Yes 70 -5.36 No 0 0 No -31 0.78 Yes 43 57.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48028690 + NM_000179 MSH6 0 . . . 3.78 74.7 24 4.99 No 68 0.78 Yes 0 0 No -23 0.89 Yes 52 67.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69109165 + NM_133509 RAD51B 0 . . . 1.19 64.28 34 7.13 Yes 35 0.44 No 0 0 No -33 0.45 No 39 68.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69058207 + NM_133509 RAD51B 0 . . . 1.62 69.22 24 5.47 No 63 0.75 No 0 0 No -23 0.65 No 34 51.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90975141 - NM_002485 NBN 0 . . . 1.57 74.65 23 5 No 57 -4.82 No 0 0 No -22 0.79 Yes 44 87.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69147325 + NM_133509 RAD51B 0 . . . 2.01 0 17 4.76 No 26 0.12 No 0 0 No -22 0.69 Yes 40 57.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94162270 - NM_005591 MRE11 0 . . . 2.02 64.95 25 5.61 Yes 65 0.92 Yes 0 0 No -30 0.76 Yes 35 87.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108189880 + NM_000051 ATM 0 . . . 6.1 74.34 20 8.96 Yes 58 -3.62 No 0 0 No -19 0.66 Yes 48 77.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68697949 + NM_133509 RAD51B 0 . . . 5.32 80.12 28 5.31 No 5 1.02 Yes 0 0 No -27 0.46 No 33 82.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68930701 + NM_133509 RAD51B 0 . . . 3.32 67.42 30 5.66 Yes 2 0.11 No 0 0 No -29 0.71 Yes 45 81.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47791479 + NM_000251 MSH2 0 . . . 0.98 0 23 5.67 Yes 6 0.74 No 0 0 No -26 0.89 Yes 52 78.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68458462 + NM_133509 RAD51B 0 . . . 1.02 64.56 30 5.38 No 72 -6.46 No 0 0 No -23 0.62 No 51 52.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190667251 + NM_000534 PMS1 0 . . . 0.16 68.35 16 4.69 No 4 -1.92 No 0 0 No -19 0.64 No 55 55.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105183377 + NM_021930 RINT1 0 . . . 3.27 77.98 34 5.83 Yes 37 0.64 No 0 0 No -27 0.43 No 21 63.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68286382 + NM_133509 RAD51B 0 . . . 1.94 74.97 21 4.9 No 67 0.48 No 0 0 No -20 0.94 Yes 54 40.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131920876 + NM_005732 RAD50 0 . . . 5.14 73 27 5.1 No 63 0.11 No 0 0 No -25 0.29 No 46 58.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807653 + NM_004360 CDH1 0 . . . 1.11 0 15 5.52 No 63 1.43 Yes 0 0 No -45 0.31 No 50 54.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68867880 + NM_004360 CDH1 0 . . . 8.17 85.05 22 5.03 No 32 0.45 No 0 0 No -21 0.84 Yes 34 86.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75490434 - NM_001040108 MLH3 0 . . . 4.32 73.1 33 5.57 Yes 23 0.28 No 0 0 No -27 0.77 Yes 43 95.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215601735 - NM_000465 BARD1 0 . . . 5.5 70.35 13 4.26 No 72 0.66 No 0 0 No -20 0.55 No 40 64.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108174837 + NM_000051 ATM 0 . . . 6.49 82.32 22 5.12 No 63 0.64 No 0 0 No -22 0.26 No 43 42.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105185993 + NM_021930 RINT1 0 . . . 3.09 84.41 14 4.47 No 60 0.89 Yes 0 0 No -34 0.29 No 45 39.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89706966 + NM_000314 PTEN 0 . . . 3.43 65.63 17 5.28 No 73 0.59 No 0 0 No -26 0.81 Yes 48 44.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68834027 + NM_133509 RAD51B 0 . . . 5.81 76.31 14 5.37 No 45 0.65 No 0 0 No -22 0.59 No 49 91.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41243756 - NM_007294 BRCA1 0 . . . 1.34 77.27 21 4.92 No -2 -1.32 No 0 0 No -45 0.82 Yes 43 24.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215640317 - NM_000465 BARD1 0 . . . 7.67 89.9 16 4.65 No 76 0.4 No 0 0 No -28 0.5 No 51 94.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131920406 + NM_005732 RAD50 0 . . . 0.23 63.78 29 5.91 Yes 49 -4.57 No 0 0 No -28 0.79 Yes 47 34.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190675056 + NM_000534 PMS1 0 . . . 1.5 67.9 18 5.11 No 18 -3.56 No 0 0 No -27 0.47 No 41 37.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69082083 + NM_133509 RAD51B 0 . . . 4.15 84.41 15 4.57 No 21 0.69 No 0 0 No -48 0.6 No 46 60.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75517556 - NM_001040108 MLH3 0 . . . 0.52 67.7 15 4.99 No 7 -2.06 No 0 0 No -45 0.65 No 52 55.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41235652 - NM_007294 BRCA1 0 . . . 7.43 76.13 29 6.79 Yes 64 1.28 Yes 0 0 No -28 0.62 No 45 96.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68926838 + NM_133509 RAD51B 0 . . . 4.69 79.22 33 6.09 Yes 67 1.19 Yes 0 0 No -29 0.89 Yes 39 52.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69027424 + NM_133509 RAD51B 0 . . . 3.01 82.81 19 5.44 No 58 -4.43 No 0 0 No -28 0.54 No 43 35.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47776263 + NM_000251 MSH2 0 . . . 2.9 71.52 20 5.57 Yes 71 -4.89 No 0 0 No -19 0.61 No 52 60.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94165871 - NM_005591 MRE11 0 . . . 4.42 84.22 16 4.69 No 8 1.13 Yes 0 0 No -25 0.71 Yes 50 94.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190728661 + NM_000534 PMS1 0 . . . 1.71 75.15 16 4.57 No -1 0.52 No 0 0 No -26 0.43 No 41 90.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190739070 + NM_000534 PMS1 0 . . . 1.05 61.43 12 4.69 No 42 1.47 Yes 0 0 No -23 0.37 No 45 66.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108180419 + NM_000051 ATM 0 . . . 1.6 67.59 12 4.48 No 37 1.33 Yes 0 0 No -22 0.44 No 55 30.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56782876 + NM_058216 RAD51C 0 . . . 3.6 85.02 24 4.46 No 4 1.2 Yes 0 0 No -23 0.9 Yes 54 63.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84387237 - NM_139076 FAM175A 0 . . . 5.36 78.62 24 5.82 Yes 51 -1.76 No 0 0 No -32 0.57 No 44 58.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48022309 + NM_000179 MSH6 0 . . . 6.63 80.28 21 5.2 No 42 0.74 No 0 0 No -20 0.85 Yes 41 59.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68725537 + NM_133509 RAD51B 0 . . . 4.8 81.47 29 4.27 No 73 1.08 Yes 0 0 No -28 0.36 No 47 89.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131966931 + NM_005732 RAD50 0 . . . 0.85 81.72 35 5.37 No 27 1.79 Yes 0 0 No -34 0.44 No 25 57.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215644440 - NM_000465 BARD1 0 . . . 0.6 67.15 19 6.66 Yes 22 0.54 No 0 0 No -29 0.8 Yes 36 96.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215632846 - NM_000465 BARD1 0 . . . 5.04 76.47 46 9.06 Yes 69 0.59 No 0 0 No -24 0.66 No 41 62.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68777522 + NM_004360 CDH1 0 . . . 0.02 81.44 23 5.39 No 76 1.03 Yes 0 0 No -50 0.67 Yes 49 91.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68623072 + NM_133509 RAD51B 0 . . . 5.35 76.38 19 5.83 Yes 4 0.87 Yes 0 0 No -18 0.77 Yes 53 47.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108102783 + NM_000051 ATM 0 . . . 5.45 75.98 15 4.95 No 75 0.46 No 0 0 No -20 0.66 No 53 61.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131970123 + NM_005732 RAD50 0 . . . 5.21 67.87 18 4.36 No 29 0.5 No 0 0 No -17 0.73 Yes 36 64.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68715154 + NM_133509 RAD51B 0 . . . 5.59 83.17 19 4.47 No 56 1.22 Yes 0 0 No -18 0.81 Yes 48 84.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105184654 + NM_021930 RINT1 0 . . . 2.72 79.74 24 4.87 No 15 0.78 Yes 0 0 No -23 0.6 No 43 86.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68925257 + NM_133509 RAD51B 0 . . . 8.16 80.69 17 6.93 Yes 67 0.59 No 0 0 No -29 0.45 No 38 93.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89664242 + NM_000314 PTEN 0 . . . 10.11 90.42 17 5.79 Yes 8 0.58 No 0 0 No -16 0.73 Yes 41 89.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190731471 + NM_000534 PMS1 0 . . . 6.09 76.38 12 5 No 5 0.21 No 0 0 No -47 0.72 Yes 41 33.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56808194 + NM_058216 RAD51C 0 . . . 5.64 72.84 66 7.16 Yes 21 0.29 No 0 0 No -23 0.71 Yes 37 70 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94227287 - NM_005591 MRE11 0 . . . 8.19 84.66 21 3.98 No 16 1.18 Yes 0 0 No -20 0.69 Yes 42 73.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56780487 + NM_058216 RAD51C 0 . . . 3.02 69.33 35 5.52 No 61 0.59 No 0 0 No -28 0.62 No 43 39.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89665551 + NM_000314 PTEN 0 . . . 6.13 77.91 34 7.66 Yes 69 0.95 Yes 0 0 No -33 0.74 Yes 46 75.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40985571 + NM_001164269 RAD51 0 . . . 3.04 84.17 17 4.35 No 32 1.52 Yes 0 0 No -30 0.54 No 26 34.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68783070 + NM_133509 RAD51B 0 . . . 1.4 69.22 27 4.62 No 53 -4.06 No 0 0 No -30 0.84 Yes 42 66.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56790886 + NM_058216 RAD51C 0 . . . 5.67 79.84 36 5.83 Yes 61 1 Yes 0 0 No -25 0.61 No 46 54.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37083671 + NM_000249 MLH1 0 . . . 9.89 85.21 33 6.03 Yes 1 1.04 Yes 0 0 No -32 0.8 Yes 46 70.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45793469 - NM_001048171 MUTYH 0 . . . 6.51 78.27 29 5.91 Yes 33 -2.09 No 0 0 No -28 0.9 Yes 44 36.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105185269 + NM_021930 RINT1 0 . . . 1.37 73.07 21 5.6 Yes 53 0.57 No 0 0 No -30 0.46 No 62 34.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56796889 + NM_058216 RAD51C 0 . . . 1.18 55.88 32 5.97 Yes 67 -2.79 No 0 0 No -31 0.69 Yes 45 58.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152358611 - NM_005431 XRCC2 0 . . . 6.56 78.92 36 7.1 Yes -3 0.55 No 0 0 No -35 0.9 Yes 40 86.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68704328 + NM_133509 RAD51B 0 . . . 2.35 0 30 6 Yes 28 1.3 Yes 0 0 No -29 0.75 Yes 30 78.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48017087 + NM_000179 MSH6 0 . . . 2.72 68.34 11 6.63 Yes 40 1.16 Yes 0 0 No -24 0.65 No 43 84.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47695542 + NM_000251 MSH2 0 . . . 1.23 74.2 81 6.43 Yes 58 0.84 Yes 0 0 No -26 0.57 No 46 26.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47705155 + NM_000251 MSH2 0 . . . 1.41 81.83 16 5.61 Yes 40 0.82 Yes 0 0 No -28 0.47 No 18 89.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108226754 + NM_000051 ATM 0 . . . 4.04 75.07 22 3.78 No 74 0.74 No 0 0 No -21 0.74 Yes 45 67.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215665429 - NM_000465 BARD1 0 . . . 0.94 0 19 5.9 Yes 66 1.4 Yes 0 0 No -29 0.77 Yes 16 63.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48019005 + NM_000179 MSH6 0 . . . 1.39 83.95 22 5 No 61 -2.73 No 0 0 No -21 0.87 Yes 48 86.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32910820 + NM_000059 BRCA2 0 . . . 4.57 78.34 23 4.9 No 62 1.72 Yes 0 0 No -22 0.5 No 49 72.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21995967 - NM_000077 CDKN2A 0 . . . 3.11 79.9 17 4.8 No 72 1.2 Yes 0 0 No -58 0.57 No 49 69.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84386282 - NM_139076 FAM175A 0 . . . 1.75 74.19 33 5.63 Yes 7 1.12 Yes 0 0 No -20 0.44 No 51 57.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215611162 - NM_000465 BARD1 0 . . . 3.36 77 34 5.74 Yes 6 0.04 No 0 0 No -21 0.39 No 54 69.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56776856 + NM_058216 RAD51C 0 . . . 0.8 69.24 17 4.36 No 13 1.08 Yes 0 0 No -20 0.73 Yes 45 70.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41259950 - NM_007294 BRCA1 0 . . . 11.66 98.91 19 6.2 Yes 33 0.94 Yes 0 0 No -25 0.56 No 34 80.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68518504 + NM_133509 RAD51B 0 . . . 7.35 75.06 17 4.93 No 11 1.13 Yes 0 0 No -22 0.92 Yes 47 92.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69114276 + NM_133509 RAD51B 0 . . . 1.88 78.11 27 4.1 No 59 0.54 No 0 0 No -29 0.69 Yes 50 66.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94214398 - NM_005591 MRE11 0 . . . 5.75 84.33 79 7.62 Yes 9 0.62 No 0 0 No -23 0.75 Yes 49 91.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47802458 + NM_000251 MSH2 0 . . . 2.72 0 11 5.02 No 36 0.5 No 0 0 No -27 0.32 No 52 43.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89692319 + NM_000314 PTEN 0 . . . 1.65 61.9 13 5 No 28 0.62 No 0 0 No -39 0.28 No 38 84.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47735832 + NM_000251 MSH2 0 . . . 2.8 81.66 21 4.85 No 55 -1.18 No 0 0 No -20 0.7 Yes 54 27.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59928488 - NM_032043 BRIP1 0 . . . 1.41 84.22 17 5.39 No 33 1.13 Yes 0 0 No -16 0.6 No 50 59.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68863829 + NM_133509 RAD51B 0 . . . 1 70.45 18 4.6 No 56 0.65 No 0 0 No -23 0.72 Yes 42 33.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68750660 + NM_133509 RAD51B 0 . . . 3.05 82.76 16 4.68 No 55 0.04 No 0 0 No -22 0.54 No 44 67.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68691345 + NM_133509 RAD51B 0 . . . 0.01 63.76 24 3.4 No 27 0.51 No 0 0 No -24 0.4 No 41 75.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68580502 + NM_133509 RAD51B 0 . . . 0.94 72.67 23 4.8 No 5 0.65 No 0 0 No -22 0.92 Yes 49 82.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47634187 + NM_000251 MSH2 0 . . . 0.18 74.21 15 5.39 No 66 -5.25 No 0 0 No -26 0.32 No 63 28.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69116227 + NM_133509 RAD51B 0 . . . 5.79 77.56 29 5.44 No -3 0.96 Yes 0 0 No -28 0.94 Yes 49 69.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190721066 + NM_000534 PMS1 0 . . . 4.86 80.32 10 4 No 19 1.34 Yes 0 0 No -30 0.48 No 39 91.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190717472 + NM_000534 PMS1 0 . . . 5.37 75.61 22 5.62 Yes 49 0.91 Yes 0 0 No -21 0.5 No 56 31.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68309783 + NM_133509 RAD51B 0 . . . 5.27 73.92 29 5.74 Yes 14 1.18 Yes 0 0 No -23 0.61 No 44 64.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90966228 - NM_002485 NBN 0 . . . 5.9 79.88 21 4.46 No 10 0.24 No 0 0 No -21 0.4 No 42 50.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68738316 + NM_133509 RAD51B 0 . . . 1.07 0 38 5.06 No 66 -2.46 No 0 0 No -37 0.41 No 31 71.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215638464 - NM_000465 BARD1 0 . . . 2.06 76.14 24 5.97 Yes 9 0.16 No 0 0 No -23 0.8 Yes 49 70.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68859033 + NM_004360 CDH1 0 . . . 2.07 71.14 24 5.8 Yes 10 -1.84 No 0 0 No -30 0.53 No 40 73.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68416465 + NM_133509 RAD51B 0 . . . 3.38 69.75 16 4.62 No 56 -5.2 No 0 0 No -21 0.62 No 45 80.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68865256 + NM_004360 CDH1 0 . . . 3.92 70.85 26 6.48 Yes 23 1.59 Yes 0 0 No -25 0.87 Yes 45 60.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108145395 + NM_000051 ATM 0 . . . 1.87 0 11 4.8 No 59 0.94 Yes 0 0 No -42 0.53 No 45 42.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7564899 - NM_000546 TP53 0 . . . 1.01 74.02 40 6.47 Yes 36 -2.59 No 0 0 No -28 0.58 No 49 60.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848106 - NM_032043 BRIP1 0 . . . 9.36 78.42 31 6.1 Yes 37 2.23 Yes 0 0 No -30 0.67 Yes 34 64.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47780348 + NM_000251 MSH2 0 . . . 6.28 79.25 28 4.69 No 12 0.9 Yes 0 0 No -27 0.55 No 46 91.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68509791 + NM_133509 RAD51B 0 . . . 7.9 80.34 15 4.58 No 29 0.95 Yes 0 0 No -35 0.58 No 40 50.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32889407 + NM_000059 BRCA2 0 . . . 4.22 79.54 30 4.84 No 52 -4.3 No 0 0 No -29 0.86 Yes 47 26.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89643146 + NM_000314 PTEN 0 . . . 3.52 72.34 23 4.52 No 14 0.17 No 0 0 No -23 0.36 No 48 57.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45802215 - NM_001048171 MUTYH 0 . . . 0.44 0 30 6 Yes 36 -2.49 No 0 0 No -29 0.84 Yes 42 36.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885017 - NM_032043 BRIP1 0 . . . 6.88 82.23 29 5.83 Yes 36 0.75 No 0 0 No -28 0.75 Yes 47 53.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68546525 + NM_133509 RAD51B 0 . . . 4.49 77.93 21 5.66 Yes 16 1.17 Yes 0 0 No -20 0.68 Yes 42 75.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68774537 + NM_133509 RAD51B 0 . . . 0.9 0 22 6.61 Yes 8 0.65 No 0 0 No -21 0.74 Yes 47 38.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108161780 + NM_000051 ATM 0 . . . 2.31 71.02 25 4.37 No 61 -3.84 No 0 0 No -24 0.82 Yes 51 25.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32912414 + NM_000059 BRCA2 0 . . . 2.17 79.05 40 6.63 Yes 10 0.33 No 0 0 No -39 0.31 No 48 62.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104180154 - NM_001100119 XRCC3 0 . . . 0.7 69.83 47 6.62 Yes 70 1.43 Yes 0 0 No -33 0.66 No 45 49.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29101837 - NM_001005735 CHEK2 0 . . . 0.25 0 26 4.01 No 26 1.01 Yes 0 0 No -25 0.7 Yes 32 79.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29120009 - NM_001005735 CHEK2 0 . . . 7.58 87.91 26 4.76 No 2 0.05 No 0 0 No -25 0.57 No 45 86.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68828054 + NM_004360 CDH1 0 . . . 0.26 82.58 18 4.9 No 75 1.48 Yes 0 0 No -46 0.71 Yes 50 88.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104162531 - NM_001100119 XRCC3 0 . . . 0.38 69.91 15 4.47 No 57 -2.34 No 0 0 No -37 0.28 No 51 28.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68700302 + NM_133509 RAD51B 0 . . . 0.57 0 66 10.57 Yes 71 -6.23 No 0 0 No -45 0.43 No 52 71.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68886323 + NM_133509 RAD51B 0 . . . 3 82.3 27 6.37 Yes 18 1 Yes 0 0 No -26 0.54 No 49 92.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89723545 + NM_000314 PTEN 0 . . . 8.14 73.14 19 4.68 No -3 0.85 Yes 0 0 No -18 0.92 Yes 33 36.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68886781 + NM_133509 RAD51B 0 . . . 5.13 74.81 34 7.33 Yes 33 1.76 Yes 0 0 No -33 0.82 Yes 25 87.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89631227 + NM_000314 PTEN 0 . . . 2.51 76.51 25 5.54 No 26 0.71 No 0 0 No -24 0.67 Yes 23 50.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108208238 + NM_000051 ATM 0 . . . 7.77 73.95 20 5.57 Yes 2 1.53 Yes 0 0 No -28 0.69 Yes 43 44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47642455 + NM_000251 MSH2 0 . . . 1.61 75.1 21 3.82 No 5 0.61 No 0 0 No -20 0.51 No 53 64.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68797486 + NM_133509 RAD51B 0 . . . 8.84 88.33 22 5.88 Yes 20 0.03 No 0 0 No -24 0.68 Yes 42 46.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52443305 - NM_004656 BAP1 0 . . . 9.47 84.97 22 4.5 No 25 1.2 Yes 0 0 No -21 0.55 No 48 96.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68733217 + NM_133509 RAD51B 0 . . . 4.4 76.89 22 5.19 No 29 -2.41 No 0 0 No -59 0.32 No 43 72.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29092322 - NM_001005735 CHEK2 0 . . . 5.75 74.69 22 6.18 Yes 20 0.49 No 0 0 No -22 0.59 No 41 75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52435798 - NM_004656 BAP1 0 . . . 5.8 74.5 29 7.75 Yes 62 -3.52 No 0 0 No -28 0.92 Yes 23 76.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105180268 + NM_021930 RINT1 0 . . . 4.76 71.2 43 4.57 No 11 0.96 Yes 0 0 No -27 0.6 No 43 62.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89714798 + NM_000314 PTEN 0 . . . 5.33 73.87 21 4.9 No -1 0.41 No 0 0 No -20 0.76 Yes 35 68.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59862079 - NM_032043 BRIP1 0 . . . 2.44 76.64 21 4.47 No -4 0.74 No 0 0 No -43 0.45 No 62 53.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68737550 + NM_133509 RAD51B 0 . . . 10.63 89.35 52 5.22 No 48 0.87 Yes 0 0 No -38 0.84 Yes 40 81.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41235587 - NM_007294 BRCA1 0 . . . 1.22 74.99 17 4.59 No 4 -1.2 No 0 0 No -44 0.82 Yes 51 44.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6034159 - NM_000535 PMS2 0 . . . 2.41 68.34 18 5.56 Yes 21 1.7 Yes 0 0 No -45 0.78 Yes 37 62.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68371358 + NM_133509 RAD51B 0 . . . 0.46 0 21 4.55 No 45 1.12 Yes 0 0 No -20 0.9 Yes 38 48.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190671218 + NM_000534 PMS1 0 . . . 5.26 88.68 22 4.32 No 9 0.6 No 0 0 No -21 0.5 No 49 81.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59807402 - NM_032043 BRIP1 0 . . . 0.04 67.88 19 4.24 No 16 0.8 Yes 0 0 No -29 0.49 No 46 77.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104167490 - NM_001100119 XRCC3 0 . . . 0.17 65.18 18 5.39 No 37 -2.75 No 0 0 No -17 0.72 Yes 44 20.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32934577 + NM_000059 BRCA2 0 . . . 3.69 79.06 29 6.16 Yes 59 1.61 Yes 0 0 No -28 0.63 No 44 64.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32952137 + NM_000059 BRCA2 0 . . . 0.22 64.67 22 4.55 No 43 0.5 No 0 0 No -21 0.94 Yes 46 62.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7587161 - NM_000546 TP53 0 . . . 1.09 69.9 31 5.83 Yes 36 -2.6 No 0 0 No -35 0.36 No 50 84.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52433378 - NM_004656 BAP1 0 . . . 1.99 70.89 13 3.6 No -2 0.7 No 0 0 No -45 0.53 No 22 63.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45798068 - NM_001048171 MUTYH 0 . . . 6.55 88.35 24 5.85 Yes 17 1.12 Yes 21 0.69 Yes -23 0.82 Yes 46 50.53 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68561453 + NM_133509 RAD51B 0 . . . 1.73 67.67 51 5.31 No 35 0.14 No 0 0 No -20 0.29 No 28 40.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190679796 + NM_000534 PMS1 0 . . . 1.78 76.63 21 4.9 No 67 -4.96 No 0 0 No -20 0.74 Yes 43 67.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152363014 - NM_005431 XRCC2 0 . . . 3.89 83.13 16 4.96 No 49 0.29 No 0 0 No -20 0.46 No 47 70.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56786084 + NM_058216 RAD51C 0 . . . 4 85.1 19 5.41 No 34 1.97 Yes 0 0 No -35 0.65 No 24 81.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68822265 + NM_004360 CDH1 0 . . . 4.17 63.95 22 5.29 No 8 0.01 No 0 0 No -21 0.64 No 50 49.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47650681 + NM_000251 MSH2 0 . . . 6.14 88.68 28 5.07 No 65 -0.35 No 0 0 No -30 0.67 Yes 39 48.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108146439 + NM_000051 ATM 0 . . . 6.67 77.7 25 4.9 No 21 0.13 No 0 0 No -24 0.92 Yes 40 60.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108108556 + NM_000051 ATM 0 . . . 0.35 66.6 15 4.61 No 74 -5.83 No 0 0 No -27 0.38 No 41 90.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68532281 + NM_133509 RAD51B 0 . . . 2.62 77.25 16 4.69 No 66 -0.69 No 0 0 No -32 0.53 No 33 63.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131940169 + NM_005732 RAD50 0 . . . 4.69 83.91 38 6.48 Yes 34 1.09 Yes 0 0 No -25 0.43 No 24 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29086195 - NM_001005735 CHEK2 0 . . . 1.52 62.57 19 5.57 Yes 57 0.6 No 0 0 No -32 0.75 Yes 50 41.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69112398 + NM_133509 RAD51B 0 . . . 10.29 81.26 28 5.28 No 17 1.11 Yes 0 0 No -25 0.63 No 41 72.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59876282 - NM_032043 BRIP1 0 . . . 4.47 73.81 26 6.79 Yes 52 0.09 No 0 0 No -31 0.49 No 44 63.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69068167 + NM_133509 RAD51B 0 . . . 5.95 85.24 20 4.65 No 15 0.79 Yes 0 0 No -25 0.8 Yes 43 72.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68638935 + NM_133509 RAD51B 0 . . . 4.18 75.42 27 6.84 Yes 45 1.31 Yes 0 0 No -26 0.94 Yes 19 59.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69055693 + NM_133509 RAD51B 0 . . . 0.59 0 38 6.3 Yes 15 0.89 Yes 0 0 No -38 0.61 No 43 81.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68991563 + NM_133509 RAD51B 0 . . . 5.64 87.52 21 5.02 No 51 -2.59 No 0 0 No -20 0.49 No 42 75.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131928507 + NM_005732 RAD50 0 . . . 4.12 73.27 15 3.28 No 12 0.76 No 0 0 No -21 0.5 No 43 66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59839525 - NM_032043 BRIP1 0 . . . 2.32 0 26 5.66 Yes 10 0.96 Yes 0 0 No -25 0.56 No 48 78.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190715887 + NM_000534 PMS1 0 . . . 1.23 61.84 17 7.12 Yes 57 1.21 Yes 0 0 No -16 0.76 Yes 32 59.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90988739 - NM_002485 NBN 0 . . . 8.24 89.75 17 4.8 No 6 0.69 No 0 0 No -47 0.54 No 52 61.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75479009 - NM_001040108 MLH3 0 . . . 1.51 60.96 32 4.51 No 40 1.19 Yes 0 0 No -26 0.66 Yes 40 53.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75508583 - NM_001040108 MLH3 0 . . . 0.92 65.4 23 6.11 Yes 39 -4.26 No 0 0 No -22 0.62 No 55 35.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84382056 - NM_139076 FAM175A 0 . . . 1.91 84.41 60 7.52 Yes 36 -1.73 No 0 0 No -28 0.4 No 45 91.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89637911 + NM_000314 PTEN 0 . . . 0.11 63.75 30 5.9 Yes 76 0.49 No 0 0 No -29 0.78 Yes 49 37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68691506 + NM_133509 RAD51B 0 . . . 4.83 88.68 22 4.9 No 52 1.41 Yes 0 0 No -21 0.82 Yes 49 95.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68789930 + NM_004360 CDH1 0 . . . 3.24 68.34 19 4.24 No 23 1.3 Yes 0 0 No -41 0.53 No 45 75.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59772184 - NM_032043 BRIP1 0 . . . 2.11 73.38 17 4.25 No 72 -5.95 No 0 0 No -24 0.49 No 50 60.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68824405 + NM_004360 CDH1 0 . . . 5.54 79.4 36 6.05 Yes 32 0.34 No 0 0 No -16 0.65 No 43 35.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68682730 + NM_133509 RAD51B 0 . . . 5.62 80.74 21 6.56 Yes 54 0.72 No 0 0 No -20 0.96 Yes 41 70.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69146998 + NM_133509 RAD51B 0 . . . 1.39 62.78 26 6.57 Yes 15 0.22 No 0 0 No -26 0.45 No 52 51.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69130495 + NM_133509 RAD51B 0 . . . 5.75 76.74 16 5.46 No -3 0.74 No 0 0 No -28 0.41 No 39 23.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94193071 - NM_005591 MRE11 0 . . . 8.8 85.67 54 8.8 Yes 53 1.64 Yes 0 0 No -27 0.64 No 32 64.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89710667 + NM_000314 PTEN 0 . . . 4.66 80.12 32 5.98 Yes 8 1.06 Yes 0 0 No -31 0.81 Yes 50 91.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45803703 - NM_001048171 MUTYH 0 . . . 3.9 71.59 15 5.1 No 49 1.75 Yes 0 0 No -19 0.63 No 36 55.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68292285 + NM_133509 RAD51B 0 . . . 0.96 72.59 20 5.08 No 63 -3.76 No 0 0 No -19 0.57 No 52 53.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69092772 + NM_133509 RAD51B 0 . . . 0.7 80.69 22 7.26 Yes 52 -4.73 No 0 0 No -21 0.77 Yes 47 39.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68313016 + NM_133509 RAD51B 0 . . . 4.97 70.63 63 7.24 Yes NA NA NA 0 0 No -30 0.33 No 45 69.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68913542 + NM_133509 RAD51B 0 . . . 0.6 0 44 7.32 Yes 24 -2.39 No 0 0 No -25 0.77 Yes 39 55.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47636524 + NM_000251 MSH2 0 . . . 6.88 81.27 18 5.2 No 62 -1.45 No 0 0 No -22 0.82 Yes 36 55.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68789252 + NM_004360 CDH1 0 . . . 0.73 75.08 38 7.31 Yes 75 0.42 No 0 0 No -27 0.64 No 45 56.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68707169 + NM_133509 RAD51B 0 . . . 3.52 78.25 28 6.35 Yes 30 0.66 No 0 0 No -27 0.54 No 40 79.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190662560 + NM_000534 PMS1 0 . . . 4.05 80.59 28 5.77 Yes 7 1.32 Yes 0 0 No -23 0.4 No 51 78.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32916305 + NM_000059 BRCA2 0 . . . 4.26 77.13 16 5.04 No 75 1.1 Yes 0 0 No -20 0.5 No 53 25.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68577382 + NM_133509 RAD51B 0 . . . 0.16 71.86 39 6.63 Yes 36 0.9 Yes 0 0 No -25 0.53 No 22 42.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69125265 + NM_133509 RAD51B 0 . . . 2.75 67.75 36 4.4 No 13 0.95 Yes 0 0 No -31 0.75 Yes 27 71.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89637924 + NM_000314 PTEN 0 . . . 3.87 88.29 17 4.69 No 9 0.52 No 0 0 No -19 0.46 No 49 90.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37048760 + NM_000249 MLH1 0 . . . 9.75 87.36 25 5.13 No 39 0.34 No 0 0 No -24 0.82 Yes 50 74.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131924821 + NM_005732 RAD50 0 . . . 4.66 68.89 29 6.93 Yes 41 0.67 No 0 0 No -29 0.71 Yes 42 70.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32948505 + NM_000059 BRCA2 0 . . . 5.34 74.78 33 6.02 Yes 34 0.21 No 0 0 No -28 0.5 No 44 67.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152356904 - NM_005431 XRCC2 0 . . . 7.01 79.2 18 7.14 Yes 72 0.7 No 0 0 No -17 0.54 No 42 58.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84403498 - NM_139076 FAM175A 0 . . . 4.19 65.09 42 6.93 Yes 54 1.11 Yes 0 0 No -41 0.7 Yes 40 64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47792732 + NM_000251 MSH2 0 . . . 4.62 74.32 17 4.69 No 64 0.22 No 0 0 No -16 0.48 No 46 54.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68929758 + NM_133509 RAD51B 0 . . . 4.36 0 24 5.48 No 32 0.11 No 0 0 No -28 0.52 No 26 66.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89626171 + NM_000314 PTEN 0 . . . 0.04 69.46 19 7.07 Yes 11 0.79 Yes 0 0 No -18 0.76 Yes 41 51.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89650958 + NM_000314 PTEN 0 . . . 2.7 62.22 27 6.32 Yes 26 0.62 No 0 0 No -26 0.87 Yes 40 65.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68928347 + NM_133509 RAD51B 0 . . . 1.7 66.93 47 6.81 Yes 63 0.94 Yes 0 0 No -25 0.61 No 48 50.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56780874 + NM_058216 RAD51C 0 . . . 3.24 67.73 35 5.7 Yes 42 1.4 Yes 0 0 No -29 0.67 Yes 31 79.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68859489 + NM_133509 RAD51B 0 . . . 0.57 66.59 45 7.44 Yes 54 0.31 No 0 0 No -33 0.6 No 48 54.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56791609 + NM_058216 RAD51C 0 . . . 3.24 68.34 17 5.36 No 23 1.57 Yes 0 0 No -27 0.58 No 45 82.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90984554 - NM_002485 NBN 0 . . . 1.91 0 61 8.2 Yes 75 0.35 No 0 0 No -60 0.63 No 54 85.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68393063 + NM_133509 RAD51B 0 . . . 4.4 70.12 21 5.1 No 76 0.14 No 0 0 No -20 0.66 No 44 68.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7572379 - NM_000546 TP53 0 . . . 0.46 59.78 19 5.14 No 39 0.62 No 0 0 No -30 0.65 No 28 86.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94221576 - NM_005591 MRE11 0 . . . 4.22 0 41 7.16 Yes 55 0.53 No 0 0 No -34 0.8 Yes 49 38.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68830403 + NM_133509 RAD51B 0 . . . 5.54 82.05 16 4.69 No 40 -3.83 No 0 0 No -22 0.6 No 19 58.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68803573 + NM_133509 RAD51B 0 . . . 10.89 88.29 25 5.38 No 11 2.04 Yes 0 0 No -24 0.91 Yes 47 94.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59789340 - NM_032043 BRIP1 0 . . . 6.72 74.85 10 5.1 No 45 -2.1 No 0 0 No -47 0.44 No 45 57.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69132043 + NM_133509 RAD51B 0 . . . 9.25 89.82 22 5.2 No 15 0.63 No 0 0 No -18 0.51 No 43 95.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68717077 + NM_133509 RAD51B 0 . . . 4.16 0 15 5.91 Yes 3 -2.17 No 0 0 No -26 0.49 No 38 46.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104179759 - NM_001100119 XRCC3 0 . . . 4.52 69.6 22 5.29 No 0 0.17 No 0 0 No -21 0.69 Yes 17 31.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190720479 + NM_000534 PMS1 0 . . . 4.71 66.21 15 5.18 No 9 0.46 No 0 0 No -15 0.29 No 44 67.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68498857 + NM_133509 RAD51B 0 . . . 0.66 64.91 28 5.45 No 28 1.17 Yes 0 0 No -27 0.81 Yes 30 83.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215637859 - NM_000465 BARD1 0 . . . 3.42 74.62 23 5.38 No 74 0.48 No 0 0 No -22 0.58 No 41 73.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33435443 - NM_002878 RAD51D 0 . . . 2.15 73.28 33 5.83 Yes 3 0.82 Yes 0 0 No -27 0.62 No 50 86.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47698042 + NM_000251 MSH2 0 . . . 1.7 74.85 32 5.85 Yes 75 0.77 Yes 0 0 No -31 0.44 No 41 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33438826 - NM_002878 RAD51D 0 . . . 7.29 87.79 56 5.3 No 32 0.84 Yes 0 0 No -22 0.65 No 48 75.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90984350 - NM_002485 NBN 0 . . . 7.48 85.97 31 5.57 Yes 28 0.91 Yes 0 0 No -30 0.85 Yes 44 81.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59860630 - NM_032043 BRIP1 0 . . . 3.99 80.31 18 6.22 Yes 39 0.12 No 0 0 No -31 0.67 Yes 23 60.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59868262 - NM_032043 BRIP1 0 . . . 0.18 67.73 30 5.22 No 70 0.39 No 0 0 No -22 0.83 Yes 50 41.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68701740 + NM_133509 RAD51B 0 . . . 6.91 86.15 39 3.73 No 2 0.05 No 0 0 No -23 0.8 Yes 51 65.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68433309 + NM_133509 RAD51B 0 . . . 2.18 74.97 24 4.8 No 62 1.95 Yes 0 0 No -23 0.64 No 43 40.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108114032 + NM_000051 ATM 0 . . . 2.17 72.62 32 5.84 Yes 20 0.61 No 0 0 No -31 0.63 No 38 93.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69095831 + NM_133509 RAD51B 0 . . . 4.19 72.52 15 5.27 No 47 0.86 Yes 0 0 No -25 0.91 Yes 51 52.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68389618 + NM_133509 RAD51B 0 . . . 2.06 78.78 24 5.48 No 32 1.16 Yes 0 0 No -23 0.67 Yes 26 57.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59932307 - NM_032043 BRIP1 0 . . . 3.43 64.88 28 5.8 Yes 32 0.37 No 0 0 No -27 0.92 Yes 38 76.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89644820 + NM_000314 PTEN 0 . . . 5.12 71.31 18 5.39 No 59 -1.63 No 0 0 No -22 0.59 No 50 75.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131957323 + NM_005732 RAD50 0 . . . 1.09 0 23 6.73 Yes 55 -2.22 No 0 0 No -22 0.49 No 56 46.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68485180 + NM_133509 RAD51B 0 . . . 8.44 83.96 20 7.14 Yes 56 0.99 Yes 0 0 No -19 0.69 Yes 48 74.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68499302 + NM_133509 RAD51B 0 . . . 4.11 66.67 17 5.02 No 9 0.85 Yes 0 0 No -17 0.34 No 49 76.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47704178 + NM_000251 MSH2 0 . . . 6.49 85.3 21 4.38 No 34 0.96 Yes 0 0 No -20 0.92 Yes 45 67.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59808606 - NM_032043 BRIP1 0 . . . 1.09 64.98 32 6.16 Yes 14 1.11 Yes 0 0 No -31 0.51 No 50 53.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68481147 + NM_133509 RAD51B 0 . . . 2.91 76.49 21 3.66 No 17 1.17 Yes 0 0 No -20 0.83 Yes 41 84.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23628439 - NM_024675 PALB2 0 . . . 1.6 68.61 22 6.71 Yes 1 0.74 No 0 0 No -21 0.96 Yes 49 77.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48029193 + NM_000179 MSH6 0 . . . 3.18 74.45 21 6.92 Yes 21 0.47 No 0 0 No -29 0.41 No 37 80.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47787006 + NM_000251 MSH2 0 . . . 2.93 76.44 43 6.86 Yes 21 -2.12 No 0 0 No -34 0.58 No 49 72.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215601522 - NM_000465 BARD1 0 . . . 2 71.29 21 4.9 No 48 0.36 No 0 0 No -20 0.96 Yes 47 88.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69138145 + NM_133509 RAD51B 0 . . . 0.99 79.34 35 7.67 Yes 55 1.54 Yes 0 0 No -34 0.51 No 34 74.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32954698 + NM_000059 BRCA2 0 . . . 3.93 81.91 18 4.83 No 25 0.44 No 0 0 No -37 0.76 Yes 40 60.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68372141 + NM_133509 RAD51B 0 . . . 4.64 70.5 32 4.82 No 39 0.43 No 0 0 No -31 0.93 Yes 31 60.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90955143 - NM_002485 NBN 0 . . . 1.9 65.45 39 6.32 Yes 63 -5.17 No 0 0 No -31 0.49 No 43 54.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23616149 - NM_024675 PALB2 0 . . . 4.05 70.85 27 5.56 Yes 13 0.83 Yes 0 0 No -26 0.94 Yes 40 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23627679 - NM_024675 PALB2 0 . . . 3.25 90.07 35 5.17 No 17 0.44 No 0 0 No -29 0.64 No 40 45.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69133036 + NM_133509 RAD51B 0 . . . 0.94 72.79 84 9.6 Yes 50 1.17 Yes 0 0 No -42 0.54 No 20 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190724934 + NM_000534 PMS1 0 . . . 4.07 82.11 24 6.19 Yes 62 0.61 No 0 0 No -23 0.92 Yes 45 30.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68478110 + NM_133509 RAD51B 0 . . . 3.41 87.45 12 4.48 No 32 1.64 Yes 0 0 No -44 0.34 No 51 75.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41012083 + NM_001164269 RAD51 0 . . . 3.65 75.68 18 4.75 No -1 -2.23 No 0 0 No -20 0.48 No 44 35.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89673886 + NM_000314 PTEN 0 . . . 3.43 69.93 23 5.33 No 36 1.03 Yes 0 0 No -23 0.61 No 26 51.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41222321 - NM_007294 BRCA1 0 . . . 4.62 83.99 18 4.12 No 25 0.77 No 0 0 No -32 0.63 No 35 40.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47665844 + NM_000251 MSH2 0 . . . 2.45 72.81 18 4.22 No 32 0.27 No 0 0 No -18 0.6 No 51 42.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59875798 - NM_032043 BRIP1 0 . . . 3.61 77.87 23 4.9 No 3 0.16 No 0 0 No -22 0.74 Yes 51 71.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69031368 + NM_133509 RAD51B 0 . . . 11.04 91.34 14 4.47 No 26 0.54 No 0 0 No -36 0.4 No 32 54.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68565674 + NM_133509 RAD51B 0 . . . 6.72 84.12 28 5.13 No -3 -0.8 No 0 0 No -34 0.43 No 44 75.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45795898 - NM_001048171 MUTYH 0 . . . 2.3 84.41 22 4.77 No 51 0.81 Yes 0 0 No -21 0.88 Yes 38 67.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108212982 + NM_000051 ATM 0 . . . 1.07 81.06 31 5.57 Yes 14 0.52 No 0 0 No -24 0.74 Yes 44 95.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104176631 - NM_001100119 XRCC3 0 . . . 9.96 83.83 22 5 No 30 1.5 Yes 0 0 No -25 0.53 No 37 60.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108199633 + NM_000051 ATM 0 . . . 1.02 70.37 36 5.72 Yes 60 -4.5 No 0 0 No -31 0.67 Yes 51 65.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68887804 + NM_133509 RAD51B 0 . . . 6.85 73.47 23 5.1 No 43 -1.82 No 0 0 No -22 0.69 Yes 46 42.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68665352 + NM_133509 RAD51B 0 . . . 4.01 81.52 27 7.04 Yes 62 0.91 Yes 0 0 No -26 0.86 Yes 44 79.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105184433 + NM_021930 RINT1 0 . . . 0.97 74.68 20 6.73 Yes 76 1.08 Yes 0 0 No -35 0.46 No 36 40.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68680348 + NM_133509 RAD51B 0 . . . 1.25 69.18 33 6.24 Yes 11 1.75 Yes 0 0 No -28 0.38 No 47 93.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152354828 - NM_005431 XRCC2 0 . . . 0.07 0 29 6.39 Yes 49 0.9 Yes 0 0 No -28 0.55 No 41 44.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90944552 - NM_002485 NBN 0 . . . 8.85 94.37 31 5.83 Yes 27 1.67 Yes 0 0 No -30 0.95 Yes 36 69.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108144431 + NM_000051 ATM 0 . . . 2.18 67.2 27 5.22 No 8 0.5 No 0 0 No -26 0.33 No 33 64.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59819666 - NM_032043 BRIP1 0 . . . 2.44 73.72 22 5.82 Yes 56 -3.29 No 0 0 No -25 0.53 No 44 42.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68531851 + NM_133509 RAD51B 0 . . . 5.92 88.68 15 5 No -4 0.23 No 0 0 No -26 0.27 No 53 22.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69094115 + NM_133509 RAD51B 0 . . . 6.51 77.24 26 5.54 No 4 0.32 No 0 0 No -30 0.83 Yes 54 36.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47767447 + NM_000251 MSH2 0 . . . 5.46 78.15 30 5.08 No 8 1.39 Yes 0 0 No -29 0.89 Yes 40 91.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89661392 + NM_000314 PTEN 0 . . . 4.36 80.93 23 4.74 No 41 1.52 Yes 0 0 No -22 0.92 Yes 17 70.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23651671 - NM_024675 PALB2 0 . . . 0.53 66.19 37 6.91 Yes 43 -0.81 No 0 0 No -31 0.48 No 39 48.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108152738 + NM_000051 ATM 0 . . . 2.89 72.13 30 5.48 No 3 1.48 Yes 0 0 No -32 0.37 No 55 46.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131948719 + NM_005732 RAD50 0 . . . 1.85 79.18 19 5.19 No 65 -5.6 No 0 0 No -25 0.43 No 50 73.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68839133 + NM_004360 CDH1 0 . . . 1.1 74.73 28 4.3 No 64 0.6 No 0 0 No -27 0.73 Yes 42 39.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89638709 + NM_000314 PTEN 0 . . . 2.43 62.38 21 4.68 No 60 0.91 Yes 0 0 No -54 0.34 No 50 79.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68829936 + NM_004360 CDH1 0 . . . 0.89 67.82 39 5.65 Yes 38 0.41 No 0 0 No -31 0.67 Yes 52 45.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69097350 + NM_133509 RAD51B 0 . . . 6.6 76.53 24 5.1 No 31 0.57 No 0 0 No -39 0.87 Yes 46 81.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131939498 + NM_005732 RAD50 0 . . . 3.43 63.62 25 5.56 Yes 38 0.89 Yes 0 0 No -24 0.54 No 27 57.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68908639 + NM_133509 RAD51B 0 . . . 3.04 70.59 45 6.29 Yes 1 2.07 Yes 0 0 No -28 0.53 No 51 58.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94193909 - NM_005591 MRE11 0 . . . 1.27 66.35 20 4.91 No 43 0.32 No 0 0 No -19 0.52 No 51 60.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68340951 + NM_133509 RAD51B 0 . . . 3.35 74.6 18 4.39 No 17 1.89 Yes 0 0 No -23 0.7 Yes 41 95.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68814681 + NM_004360 CDH1 0 . . . 0.17 0 22 5.29 No 13 0.45 No 0 0 No -19 0.44 No 31 72.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47733728 + NM_000251 MSH2 0 . . . 1.74 60.9 17 3.91 No 47 0.58 No 0 0 No -21 0.5 No 45 37.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104169572 - NM_001100119 XRCC3 0 . . . 5.56 81.42 13 4.4 No -3 1.33 Yes 0 0 No -24 0.64 No 43 29.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215626392 - NM_000465 BARD1 0 . . . 1.56 0 21 4.8 No 33 1.04 Yes 0 0 No -20 0.92 Yes 25 90.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215654098 - NM_000465 BARD1 0 . . . 9.09 88.27 16 4.22 No 28 1.15 Yes 0 0 No -24 0.5 No 48 52.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32898988 + NM_000059 BRCA2 0 . . . 2.22 72.25 16 5.24 No 27 1.47 Yes 0 0 No -22 0.46 No 43 92.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68588427 + NM_133509 RAD51B 0 . . . 1.4 72.51 13 4.59 No 36 -4.17 No 0 0 No -22 0.8 Yes 55 67.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75491937 - NM_001040108 MLH3 0 . . . 1.21 80.8 20 5.1 No 70 -5.73 No 0 0 No -30 0.61 No 52 89.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84404042 - NM_139076 FAM175A 0 . . . 4.65 77.7 36 6.22 Yes 3 0.93 Yes 0 0 No -35 0.8 Yes 37 67.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68701264 + NM_133509 RAD51B 0 . . . 4.57 82.31 21 4.47 No 70 -4.19 No 0 0 No -53 0.65 No 50 87.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47692733 + NM_000251 MSH2 0 . . . 8.04 84.35 18 4.9 No 75 -5.39 No 0 0 No -17 0.53 No 48 93.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59882105 - NM_032043 BRIP1 0 . . . 2.43 68.04 15 5.17 No 24 1.12 Yes 0 0 No -42 0.34 No 34 84.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47649109 + NM_000251 MSH2 0 . . . 2.05 79.36 33 5.83 Yes 42 -4.09 No 0 0 No -27 0.4 No 52 43.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94188545 - NM_005591 MRE11 0 . . . 7.05 79.26 38 6.61 Yes 55 0.6 No 0 0 No -32 0.42 No 51 46.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215633184 - NM_000465 BARD1 0 . . . 2.08 74.46 29 4.61 No 0 1.06 Yes 0 0 No -26 0.33 No 46 58.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1209194 + NM_000455 STK11 0 . . . 0.51 70.45 44 6.2 Yes 37 -1.48 No 0 0 No -31 0.46 No 47 40.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32962025 + NM_000059 BRCA2 0 . . . 5.01 73.93 19 4.71 No 6 1.05 Yes 0 0 No -26 0.89 Yes 38 78.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23633880 - NM_024675 PALB2 0 . . . 0.28 57.04 24 6.48 Yes 58 -2.05 No 0 0 No -23 0.86 Yes 50 81.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215610988 - NM_000465 BARD1 0 . . . 8.74 91.93 39 6.62 Yes 51 1.44 Yes 0 0 No -25 0.51 No 43 50.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131980826 + NM_005732 RAD50 0 . . . 2.84 69.97 17 4.79 No 11 1.3 Yes 0 0 No -16 0.53 No 41 61.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68723722 + NM_133509 RAD51B 0 . . . 3.5 75.22 10 4.9 No 50 1.08 Yes 0 0 No -49 0.42 No 49 29.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94179029 - NM_005591 MRE11 0 . . . 2.48 76.4 31 6.77 Yes 39 1.66 Yes 0 0 No -23 0.44 No 35 35.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37051935 + NM_000249 MLH1 0 . . . 5.74 77.7 14 5.71 Yes 59 0.5 No 0 0 No -27 0.36 No 48 68.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41005990 + NM_001164269 RAD51 0 . . . 3.25 80.12 14 4.69 No 8 1.2 Yes 0 0 No -52 0.8 Yes 50 87.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47708032 + NM_000251 MSH2 0 . . . 5.15 81.82 22 5.88 Yes 54 -3.15 No 0 0 No -21 0.96 Yes 55 65.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68314779 + NM_133509 RAD51B 0 . . . 2.3 0 27 5.09 No 1 0.82 Yes 0 0 No -26 0.92 Yes 22 44.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56773765 + NM_058216 RAD51C 0 . . . 1.69 78.88 37 5.93 Yes 58 -4.02 No 0 0 No -34 0.48 No 43 62.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59853594 - NM_032043 BRIP1 0 . . . 5.25 78.88 35 5.92 Yes 24 0.7 No 0 0 No -25 0.46 No 40 59.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47682265 + NM_000251 MSH2 0 . . . 5.07 61.94 21 4.96 No 47 0.34 No 0 0 No -25 0.34 No 43 84.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56781441 + NM_058216 RAD51C 0 . . . 0.49 65.38 29 6.24 Yes 30 0.03 No 0 0 No -35 0.63 No 50 77.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68812960 + NM_004360 CDH1 0 . . . 1.51 72.76 18 4.71 No 67 -3.33 No 0 0 No -26 0.6 No 48 21.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215635824 - NM_000465 BARD1 0 . . . 1.39 66.77 23 5.03 No 48 -4.28 No 0 0 No -22 0.7 Yes 51 65.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94218318 - NM_005591 MRE11 0 . . . 3.95 74.06 16 4.69 No 34 1.14 Yes 0 0 No -22 0.7 Yes 49 53.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68713611 + NM_133509 RAD51B 0 . . . 4.09 0 21 5.46 No 69 0.22 No 0 0 No -20 0.83 Yes 47 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131907933 + NM_005732 RAD50 0 . . . 4.11 75.54 14 4.18 No 23 0.78 Yes 0 0 No -23 0.2 No 49 40.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68704361 + NM_133509 RAD51B 0 . . . 2.41 70.25 31 6.44 Yes 61 1.28 Yes 0 0 No -34 0.59 No 41 58.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7588193 - NM_000546 TP53 0 . . . 8.05 92.12 28 5.83 Yes 27 0.7 No 0 0 No -27 0.78 Yes 38 64.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68482264 + NM_133509 RAD51B 0 . . . 7.22 76.2 29 4.63 No 76 -5.08 No 0 0 No -28 0.61 No 51 63.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215621128 - NM_000465 BARD1 0 . . . 7 77.59 28 5.38 No 13 -1.23 No 0 0 No -27 0.63 No 45 87.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68366689 + NM_133509 RAD51B 0 . . . 4.42 77.4 21 4.76 No 12 0.29 No 0 0 No -21 0.82 Yes 39 44.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68403379 + NM_133509 RAD51B 0 . . . 2.38 76.2 26 4.16 No 46 -2.62 No 0 0 No -25 0.59 No 47 83.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68810234 + NM_133509 RAD51B 0 . . . 1.11 76 18 4.99 No 71 0.84 Yes 0 0 No -22 0.58 No 46 47.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131894757 + NM_005732 RAD50 0 . . . 3.48 79.68 36 6.16 Yes 63 0.49 No 0 0 No -35 0.72 Yes 42 73.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105208733 + NM_021930 RINT1 0 . . . 1.43 65.45 28 5.83 Yes 23 1.41 Yes 0 0 No -27 0.76 Yes 22 61.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37078192 + NM_000249 MLH1 0 . . . 1.71 67.42 16 4.95 No 75 2.22 Yes 0 0 No -20 0.83 Yes 55 48.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84380450 - NM_139076 FAM175A 0 . . . 6.49 71.58 19 5.92 Yes 17 0.42 No 0 0 No -26 0.7 Yes 40 72.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68887524 + NM_133509 RAD51B 0 . . . 0.86 73.61 57 8.12 Yes 39 2.17 Yes 0 0 No -28 0.51 No 31 46.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94184240 - NM_005591 MRE11 0 . . . 5.6 88.18 22 4.9 No 55 1.19 Yes 0 0 No -21 0.9 Yes 63 35.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84397109 - NM_139076 FAM175A 0 . . . 4.88 73.43 25 5.51 No 18 0.91 Yes 0 0 No -33 0.28 No 40 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105193560 + NM_021930 RINT1 0 . . . 4.61 78.56 62 5.74 Yes 62 0.55 No 0 0 No -34 0.93 Yes 50 37.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68451164 + NM_133509 RAD51B 0 . . . 1.52 68.86 15 5.44 No 23 1.49 Yes 0 0 No -31 0.45 No 42 62.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68752371 + NM_133509 RAD51B 0 . . . 5.31 66.44 27 5.48 No -1 1.48 Yes 0 0 No -31 0.61 No 43 90.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59931611 - NM_032043 BRIP1 0 . . . 3.82 87.29 15 4.58 No 75 0.48 No 0 0 No -31 0.45 No 20 69.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68873371 + NM_133509 RAD51B 0 . . . 0.8 73.04 15 4.95 No 21 0.42 No 0 0 No -26 0.45 No 51 82.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68586591 + NM_133509 RAD51B 0 . . . 1.75 0 17 4.8 No 66 -4.72 No 0 0 No -19 0.48 No 46 44.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68823038 + NM_133509 RAD51B 0 . . . 2.21 74.78 29 6.77 Yes 65 1.02 Yes 0 0 No -28 0.65 No 46 80.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41018551 + NM_001164269 RAD51 0 . . . 4.4 70.06 10 4 No 16 1.1 Yes 0 0 No -27 0.86 Yes 42 87.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32965903 + NM_000059 BRCA2 0 . . . 0.59 0 45 7.1 Yes 33 0.45 No 0 0 No -32 0.61 No 19 61.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108138962 + NM_000051 ATM 0 . . . 4.04 84.8 23 4.9 No 43 0.8 Yes 0 0 No -25 0.68 Yes 43 91.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23630993 - NM_024675 PALB2 0 . . . 1.88 71.09 32 4.05 No 19 0.36 No 0 0 No -45 0.51 No 39 64.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40999815 + NM_001164269 RAD51 0 . . . 4.94 67.95 15 5.1 No 70 1.56 Yes 0 0 No -19 0.38 No 49 56.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69057266 + NM_133509 RAD51B 0 . . . 1.84 70.95 23 6.63 Yes 13 0.28 No 0 0 No -31 0.39 No 45 67.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69031919 + NM_133509 RAD51B 0 . . . 1.98 64.33 29 5.01 No 14 0.93 Yes 0 0 No -28 0.63 No 44 91.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152372925 - NM_005431 XRCC2 0 . . . 3.67 71.83 31 5.99 Yes 19 0.76 No 0 0 No -27 0.27 No 39 57.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68291185 + NM_133509 RAD51B 0 . . . 0.42 74.73 28 6.82 Yes 33 0.88 Yes 0 0 No -27 0.91 Yes 42 38.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68942869 + NM_133509 RAD51B 0 . . . 2.56 73.16 21 4.7 No 3 0.88 Yes 0 0 No -20 0.7 Yes 49 41.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69052749 + NM_133509 RAD51B 0 . . . 7.93 86.04 17 5.73 Yes 6 0.26 No 0 0 No -19 0.82 Yes 47 63.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215610812 - NM_000465 BARD1 0 . . . 1.68 67.74 27 5.29 No 67 -6.49 No 0 0 No -26 0.88 Yes 56 18.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104176787 - NM_001100119 XRCC3 0 . . . 6.25 69.58 21 5.72 Yes 66 1.67 Yes 0 0 No -23 0.78 Yes 44 42.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68919821 + NM_133509 RAD51B 0 . . . 0.6 57.86 24 5.87 Yes -4 0.26 No 0 0 No -23 0.91 Yes 50 38.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131972942 + NM_005732 RAD50 0 . . . 4.4 0 77 6.46 Yes 75 -3.91 No 0 0 No -30 0.36 No 39 74.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69054996 + NM_133509 RAD51B 0 . . . 1.84 79.91 24 5.48 No 71 1.37 Yes 0 0 No -23 0.55 No 43 70.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215640386 - NM_000465 BARD1 0 . . . 7.91 89.88 31 4.83 No 64 0.71 No 0 0 No -30 0.29 No 36 75.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90956087 - NM_002485 NBN 0 . . . 0.84 72.9 17 5.74 Yes 38 0.54 No 0 0 No -27 0.29 No 32 64.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56776312 + NM_058216 RAD51C 0 . . . 0.3 70.59 26 6.47 Yes 29 0.25 No 0 0 No -25 0.8 Yes 41 17.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89712279 + NM_000314 PTEN 0 . . . 0.39 65.9 26 5.09 No 76 -2.24 No 0 0 No -25 0.55 No 32 91.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68759364 + NM_133509 RAD51B 0 . . . 3.64 61.94 27 5 No 44 0.85 Yes 0 0 No -24 0.64 No 44 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75504185 - NM_001040108 MLH3 0 . . . 0.07 62.03 12 5.39 No 2 0.27 No 0 0 No -28 0.35 No 39 36.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29100224 - NM_001005735 CHEK2 0 . . . 0.6 74.02 22 4.9 No 73 -5.74 No 0 0 No -21 0.63 No 48 83.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47701868 + NM_000251 MSH2 0 . . . 1.87 80.37 16 4.68 No 8 1.1 Yes 0 0 No -56 0.77 Yes 50 88.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41024125 + NM_001164269 RAD51 0 . . . 2.89 62.41 15 4.58 No 14 0.39 No 0 0 No -21 0.28 No 44 61.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68642107 + NM_133509 RAD51B 0 . . . 1.6 0 31 5.81 Yes 17 2.16 Yes 0 0 No -30 0.87 Yes 41 91.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190727278 + NM_000534 PMS1 0 . . . 3.06 81.53 17 4.73 No 60 2.14 Yes 0 0 No -20 0.58 No 44 41.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105200837 + NM_021930 RINT1 0 . . . 0.01 68.85 30 7.28 Yes 45 -0.73 No 0 0 No -29 0.86 Yes 59 21.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94168006 - NM_005591 MRE11 0 . . . 8.89 89.6 37 6.32 Yes 19 0.67 No 0 0 No -36 0.82 Yes 39 51.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108184743 + NM_000051 ATM 0 . . . 5.32 75.14 14 4.36 No 33 1.37 Yes 0 0 No -20 0.36 No 38 51.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69111439 + NM_133509 RAD51B 0 . . . 0.07 0 13 4.36 No 39 0.97 Yes 0 0 No -34 0.59 No 26 42.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68879710 + NM_133509 RAD51B 0 . . . 1.97 65.65 26 5 No 12 0.98 Yes 0 0 No -25 0.36 No 46 58.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131937353 + NM_005732 RAD50 0 . . . 0.95 55.09 19 5.92 Yes 61 0.96 Yes 0 0 No -47 0.57 No 35 32.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190696278 + NM_000534 PMS1 0 . . . 1.48 76.04 12 5.74 Yes 12 0.88 Yes 0 0 No -35 0.37 No 46 67.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32970658 + NM_000059 BRCA2 0 . . . 3.17 75.71 20 5.57 Yes 17 0.04 No 0 0 No -19 0.68 Yes 45 51.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90987272 - NM_002485 NBN 0 . . . 5.11 74.9 17 5.54 No 4 0.95 Yes 0 0 No -24 0.62 No 45 71.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47638815 + NM_000251 MSH2 0 . . . 6.62 74.08 13 5.4 No 28 2.06 Yes 0 0 No -28 0.79 Yes 30 72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59860702 - NM_032043 BRIP1 0 . . . 4.15 0 43 6.81 Yes 26 2.5 Yes 0 0 No -25 0.66 Yes 32 96.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190741957 + NM_000534 PMS1 0 . . . 3.43 0 20 7.14 Yes 6 0.65 No 26 0.51 Yes -19 0.65 No 20 67.32 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr9 21993669 - NM_000077 CDKN2A 0 . . . 11.01 88.35 28 5.65 Yes 62 1.58 Yes 0 0 No -27 0.52 No 51 60.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68717692 + NM_133509 RAD51B 0 . . . 3.37 87.01 38 7.93 Yes 56 -2.64 No 0 0 No -37 0.78 Yes 47 58.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68416145 + NM_133509 RAD51B 0 . . . 5.45 73.77 18 4.79 No 13 1.43 Yes 0 0 No -17 0.69 Yes 45 94.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47768959 + NM_000251 MSH2 0 . . . 3.77 74.21 24 5.18 No 69 -3.73 No 0 0 No -20 0.3 No 46 37.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274895 - NM_007294 BRCA1 0 . . . 5.55 85.79 22 4.8 No 19 1.54 Yes 0 0 No -40 0.85 Yes 39 95.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94196509 - NM_005591 MRE11 0 . . . 1.59 55.22 22 5.78 Yes 19 0.32 No 0 0 No -21 0.65 No 39 82.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59920948 - NM_032043 BRIP1 0 . . . 5.7 76.57 21 6.68 Yes 49 -2.44 No 0 0 No -20 0.81 Yes 50 62.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131919220 + NM_005732 RAD50 0 . . . 1.93 0 29 5.22 No 49 -3.89 No 0 0 No -28 0.78 Yes 44 73.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90954201 - NM_002485 NBN 0 . . . 5.98 85.59 12 3.79 No -3 1.49 Yes 0 0 No -42 0.51 No 45 92.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131931924 + NM_005732 RAD50 0 . . . 0.32 71.11 28 5.79 Yes 11 0.93 Yes 0 0 No -27 0.59 No 47 86.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59933751 - NM_032043 BRIP1 0 . . . 1.18 81.17 29 7.35 Yes 48 0.33 No 0 0 No -28 0.93 Yes 48 50.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94219544 - NM_005591 MRE11 0 . . . 3.9 71.35 22 5.2 No 22 0.1 No 0 0 No -24 0.57 No 36 71.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108237477 + NM_000051 ATM 0 . . . 6.26 75.91 44 5.98 Yes 3 1.04 Yes 0 0 No -35 0.34 No 42 59.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37047951 + NM_000249 MLH1 0 . . . 1.9 73.78 13 5.38 No 5 0.69 No 0 0 No -45 0.45 No 42 92.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215619039 - NM_000465 BARD1 0 . . . 3.06 90.45 18 5.3 No 27 1 Yes 0 0 No -20 0.45 No 31 78.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69046240 + NM_133509 RAD51B 0 . . . 4.83 67.94 28 4.61 No 50 -2.73 No 0 0 No -27 0.49 No 51 77.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89728661 + NM_000314 PTEN 0 . . . 8.23 72.95 28 5.83 Yes 18 0.33 No 0 0 No -27 0.77 Yes 40 94.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131934343 + NM_005732 RAD50 0 . . . 3.31 68.1 28 5.61 Yes 27 0.76 No 0 0 No -27 0.8 Yes 50 47.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41225474 - NM_007294 BRCA1 0 . . . 3.86 72.61 11 4.9 No 71 0.02 No 0 0 No -20 0.78 Yes 39 84.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32939239 + NM_000059 BRCA2 0 . . . 4.06 79.63 26 5.45 No 51 0.37 No 0 0 No -25 0.75 Yes 50 59.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68407983 + NM_133509 RAD51B 0 . . . 2.48 83.89 33 5.83 Yes 53 -3.7 No 0 0 No -32 0.94 Yes 49 69.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68978648 + NM_133509 RAD51B 0 . . . 4.85 79.61 17 5.38 No 42 1.43 Yes 0 0 No -22 0.48 No 40 87.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68570595 + NM_133509 RAD51B 0 . . . 4.34 66.68 23 7.64 Yes 48 0.28 No 0 0 No -26 0.57 No 49 50.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68333899 + NM_133509 RAD51B 0 . . . 1.33 67.48 31 3.91 No 41 0.29 No 0 0 No -24 0.55 No 47 49.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68964287 + NM_133509 RAD51B 0 . . . 1 68.97 26 5.48 No 60 1.02 Yes 0 0 No -25 0.9 Yes 42 77.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190733307 + NM_000534 PMS1 0 . . . 4.97 78.18 27 6.36 Yes 37 1.46 Yes 0 0 No -26 0.55 No 21 86.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108109424 + NM_000051 ATM 0 . . . 7.49 86.05 36 6.4 Yes 70 1.57 Yes 0 0 No -30 0.46 No 33 56.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68604896 + NM_133509 RAD51B 0 . . . 2.36 86.41 17 6.93 Yes 4 0.4 No 0 0 No -16 0.34 No 27 86.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37035186 + NM_000249 MLH1 0 . . . 1.02 69.49 36 6.17 Yes 64 -5.54 No 0 0 No -35 0.8 Yes 48 44.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104163142 - NM_001100119 XRCC3 0 . . . 3.81 77.94 31 5.73 Yes 61 2.12 Yes 0 0 No -30 0.8 Yes 41 56.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89665442 + NM_000314 PTEN 0 . . . 0.42 74.73 35 6.68 Yes 33 1.17 Yes 0 0 No -26 0.73 Yes 39 38.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41001544 + NM_001164269 RAD51 0 . . . 5.85 90.15 22 5.07 No 31 1.05 Yes 0 0 No -21 0.57 No 47 84.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215628771 - NM_000465 BARD1 0 . . . 3.87 80.88 19 4.58 No 45 0.9 Yes 0 0 No -38 0.56 No 45 83.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47662479 + NM_000251 MSH2 0 . . . 1.87 80.12 37 6.16 Yes 6 1.13 Yes 0 0 No -31 0.54 No 52 73.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108121530 + NM_000051 ATM 0 . . . 5.84 83.52 24 5.48 No 41 1.24 Yes 0 0 No -20 0.61 No 48 81.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33435655 - NM_002878 RAD51D 0 . . . 2.39 58.45 26 5.72 Yes 54 0.59 No 0 0 No -30 0.46 No 30 45.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68468364 + NM_133509 RAD51B 0 . . . 4.99 77.72 26 5.1 No 75 -1.33 No 0 0 No -53 0.62 No 49 96.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48012173 + NM_000179 MSH6 0 . . . 0.72 77.77 26 5.57 Yes 32 1.16 Yes 0 0 No -47 0.5 No 26 43.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41268316 - NM_007294 BRCA1 0 . . . 2.01 76.59 34 6 Yes 73 -6.08 No 0 0 No -59 0.3 No 46 55.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131959144 + NM_005732 RAD50 0 . . . 0.38 76.63 28 5.38 No 66 -4.9 No 0 0 No -27 0.65 No 43 45.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6023334 - NM_000535 PMS2 0 . . . 2.95 75.86 14 4.29 No 0 0.31 No 0 0 No -24 0.69 Yes 44 73.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29127782 - NM_001005735 CHEK2 0 . . . 0.95 70.96 20 5.56 Yes 71 -5.38 No 0 0 No -38 0.39 No 46 54.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59789916 - NM_032043 BRIP1 0 . . . 6.21 81.92 50 6.79 Yes 48 0.65 No 0 0 No -22 0.48 No 41 52.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47764731 + NM_000251 MSH2 0 . . . 4.51 70.83 18 3.93 No 21 0.99 Yes 0 0 No -7 0.25 No 37 60.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37041369 + NM_000249 MLH1 0 . . . 1.2 0 25 5.19 No 12 0.46 No 0 0 No -27 0.48 No 46 89.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89650793 + NM_000314 PTEN 0 . . . 3.94 0 27 5.2 No 15 1.35 Yes 0 0 No -58 0.51 No 42 75.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59781523 - NM_032043 BRIP1 0 . . . 1.74 59.65 18 7.93 Yes 43 -1.94 No 0 0 No -22 0.61 No 44 57.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56794476 + NM_058216 RAD51C 0 . . . 2 71.46 38 5.84 Yes 74 1.76 Yes 0 0 No -37 0.67 Yes 54 66.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68382844 + NM_133509 RAD51B 0 . . . 5.95 78.04 25 5.08 No 39 -2.38 No 0 0 No -24 0.72 Yes 37 70.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68369263 + NM_133509 RAD51B 0 . . . 3.24 70.8 29 4.83 No 61 0.54 No 0 0 No -28 0.88 Yes 44 47.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94182191 - NM_005591 MRE11 0 . . . 1.41 74.03 16 5.64 Yes 64 0.31 No 0 0 No -26 0.86 Yes 41 84.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68708993 + NM_133509 RAD51B 0 . . . 1.57 66.49 32 5.74 Yes 50 0.93 Yes 0 0 No -32 0.45 No 33 34.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69036646 + NM_133509 RAD51B 0 . . . 0.55 78.83 15 3.18 No 75 -2.65 No 0 0 No -19 0.87 Yes 52 26.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32919833 + NM_000059 BRCA2 0 . . . 1.07 66.19 22 6.92 Yes 39 -3.68 No 0 0 No -21 0.69 Yes 51 32.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90959153 - NM_002485 NBN 0 . . . 0.33 59.48 11 4.12 No -3 0.62 No 0 0 No -27 0.35 No 38 45.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68867079 + NM_133509 RAD51B 0 . . . 0.59 0 15 6.77 Yes 40 0.63 No 0 0 No -25 0.64 No 29 55.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215663648 - NM_000465 BARD1 0 . . . 2.09 78.8 21 5.65 Yes 33 1.17 Yes 0 0 No -26 0.74 Yes 25 43.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94170712 - NM_005591 MRE11 0 . . . 5.01 68.59 17 5.19 No 45 -2.17 No 0 0 No -24 0.73 Yes 45 73.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68810896 + NM_004360 CDH1 0 . . . 3.71 74.56 16 5.2 No 18 0.81 Yes 0 0 No -26 0.36 No 47 64.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94153768 - NM_005591 MRE11 0 . . . 1.42 64.22 32 5.57 Yes 15 -2.65 No 0 0 No -31 0.61 No 44 37.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47761354 + NM_000251 MSH2 0 . . . 5.11 91.32 26 6.54 Yes 37 0.98 Yes 0 0 No -25 0.88 Yes 21 41.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41272251 - NM_007294 BRCA1 0 . . . 0.44 71.53 23 4.78 No 25 0.82 Yes 0 0 No -22 0.39 No 33 79.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68288340 + NM_133509 RAD51B 0 . . . 0.49 62.14 24 5.33 No 42 1.1 Yes 0 0 No -23 0.83 Yes 48 26.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59782388 - NM_032043 BRIP1 0 . . . 5.82 84.88 38 7.87 Yes 31 0.12 No 0 0 No -37 0.86 Yes 38 69.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90957892 - NM_002485 NBN 0 . . . 3.64 82.1 30 5.01 No 5 0.57 No 0 0 No -29 0.51 No 53 34.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68600975 + NM_133509 RAD51B 0 . . . 2.42 65.86 32 5.19 No 24 1.12 Yes 0 0 No -26 0.89 Yes 34 92.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47769698 + NM_000251 MSH2 0 . . . 4.3 65.53 16 4.34 No 68 0.86 Yes 0 0 No -42 0.46 No 42 51.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68434948 + NM_133509 RAD51B 0 . . . 8.69 90.57 31 6.02 Yes 8 0.57 No 0 0 No -30 0.5 No 47 59.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68467636 + NM_133509 RAD51B 0 . . . 8.85 80.12 13 5.05 No 16 1.26 Yes 0 0 No -20 0.93 Yes 42 98.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68285081 + NM_133509 RAD51B 0 . . . 3.37 71.04 22 6.12 Yes 18 1.84 Yes 0 0 No -21 0.74 Yes 40 95.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47766352 + NM_000251 MSH2 0 . . . 3.2 74.13 28 3.92 No 6 0.98 Yes 0 0 No -27 0.51 No 42 44.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90945546 - NM_002485 NBN 0 . . . 1.6 66.81 16 6.58 Yes 71 -5.13 No 0 0 No -42 0.49 No 48 67.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84404755 - NM_139076 FAM175A 0 . . . 8.95 92.63 23 4.9 No 6 0.93 Yes 0 0 No -23 0.39 No 38 84.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94170827 - NM_005591 MRE11 0 . . . 1.79 67.18 28 5.19 No 11 -1.89 No 0 0 No -27 0.8 Yes 47 58.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47675363 + NM_000251 MSH2 0 . . . 4.11 65.68 16 6.26 Yes 24 0.89 Yes 0 0 No -25 0.43 No 34 76.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69146520 + NM_133509 RAD51B 0 . . . 1.28 0 24 4.97 No 64 1.75 Yes 0 0 No -23 0.83 Yes 57 35.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69099513 + NM_133509 RAD51B 0 . . . 6.85 91.2 20 4.9 No 13 1.07 Yes 0 0 No -17 0.64 No 45 87.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41215559 - NM_007294 BRCA1 0 . . . 6.2 83.07 16 4.13 No 64 -4.75 No 0 0 No -24 0.62 No 35 33.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56771402 + NM_058216 RAD51C 0 . . . 9.74 97.81 25 5.31 No 39 1.63 Yes 0 0 No -22 0.59 No 49 73.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59850984 - NM_032043 BRIP1 0 . . . 2.43 0 24 4.8 No 54 -1.35 No 0 0 No -53 0.59 No 14 35.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32892599 + NM_000059 BRCA2 0 . . . 2.36 83.57 26 5.82 Yes 31 0.13 No 0 0 No -25 0.75 Yes 33 47.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68369978 + NM_133509 RAD51B 0 . . . 0 75.16 60 8.48 Yes 22 0.61 No 0 0 No -59 0.52 No 31 87.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68839660 + NM_004360 CDH1 0 . . . 0.06 67.62 16 4.12 No 52 0.06 No 0 0 No -24 0.74 Yes 48 75.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1215971 + NM_000455 STK11 0 . . . 6.45 82.31 13 4.8 No 58 1.16 Yes 0 0 No -24 0.58 No 55 37.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45807663 - NM_001048171 MUTYH 0 . . . 4.44 80.55 22 5.1 No 8 0.71 No 0 0 No -21 0.4 No 47 68.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108145361 + NM_000051 ATM 0 . . . 1.51 76.28 43 5.13 No 25 0.97 Yes 0 0 No -30 0.86 Yes 37 80.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68914536 + NM_133509 RAD51B 0 . . . 6.52 74.43 28 6.86 Yes 32 0.96 Yes 0 0 No -27 0.72 Yes 45 54.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68863161 + NM_133509 RAD51B 0 . . . 3.14 70.9 18 4.45 No 54 1.32 Yes 0 0 No -53 0.58 No 45 85.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90991473 - NM_002485 NBN 0 . . . 2.11 77.18 70 9 Yes 53 0.34 No 0 0 No -44 0.71 Yes 46 70.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105185217 + NM_021930 RINT1 0 . . . 4.55 70.52 40 6.73 Yes 1 0.58 No 0 0 No -33 0.95 Yes 48 63.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69040588 + NM_133509 RAD51B 0 . . . 6.72 0 18 6.16 Yes 2 0.83 Yes 0 0 No -17 0.55 No 44 74.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68445967 + NM_133509 RAD51B 0 . . . 1.91 67.83 26 5.98 Yes 71 1.07 Yes 0 0 No -25 0.95 Yes 44 33.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68762561 + NM_133509 RAD51B 0 . . . 4.63 76.79 27 4.56 No 43 1.13 Yes 0 0 No -26 0.49 No 48 67.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190730569 + NM_000534 PMS1 0 . . . 6.7 82.22 106 11.12 Yes 1 0.11 No 0 0 No -23 0.89 Yes 48 71.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47750282 + NM_000251 MSH2 0 . . . 0.94 69.12 22 6.56 Yes 48 0.77 Yes 0 0 No -21 0.49 No 49 81.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68824583 + NM_004360 CDH1 0 . . . 4.08 70.97 25 6.19 Yes 12 1.58 Yes 0 0 No -24 0.67 Yes 46 91.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69135721 + NM_133509 RAD51B 0 . . . 8.19 83.06 20 5.1 No 15 0.28 No 0 0 No -19 0.56 No 43 75.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131951039 + NM_005732 RAD50 0 . . . 0.36 71.37 9 4.56 No 69 0.55 No 0 0 No -21 0.59 No 40 58.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59847922 - NM_032043 BRIP1 0 . . . 7.93 80.67 27 5.37 No 55 0.9 Yes 0 0 No -26 0.86 Yes 39 63.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68887764 + NM_133509 RAD51B 0 . . . 0.95 60.71 29 5.86 Yes 71 0.77 Yes 0 0 No -28 0.6 No 46 76.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68723276 + NM_133509 RAD51B 0 . . . 3.56 83.97 27 5.29 No 55 0.62 No 0 0 No -26 0.54 No 53 41.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6027889 - NM_000535 PMS2 0 . . . 3.85 79.55 14 4.26 No 67 -4.92 No 0 0 No -24 0.64 No 44 83.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68968670 + NM_133509 RAD51B 0 . . . 1.38 0 22 4.21 No 42 -1.55 No 0 0 No -22 0.39 No 40 47.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68677074 + NM_133509 RAD51B 0 . . . 0.77 66.11 15 5.61 Yes 38 0.35 No 0 0 No -26 0.26 No 44 69.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59868430 - NM_032043 BRIP1 0 . . . 5.51 85.49 26 5.1 No 7 0.12 No 0 0 No -23 0.32 No 47 79.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108116856 + NM_000051 ATM 0 . . . 3.81 63.49 54 7.45 Yes 65 1.75 Yes 0 0 No -23 0.48 No 47 38.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47781459 + NM_000251 MSH2 0 . . . 1.63 71.19 45 7.47 Yes 24 -2.29 No 0 0 No -44 0.6 No 53 36.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69031704 + NM_133509 RAD51B 0 . . . 1.2 0 25 6.71 Yes -2 0.77 No 0 0 No -24 0.54 No 43 50.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69077338 + NM_133509 RAD51B 0 . . . 7.23 83.13 15 5.38 No 18 1.16 Yes 0 0 No -22 0.84 Yes 40 88.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68477527 + NM_133509 RAD51B 0 . . . 1.13 0 44 6.71 Yes 72 -3.59 No 0 0 No -31 0.4 No 45 67.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89644288 + NM_000314 PTEN 0 . . . 0.21 70.52 22 5.29 No 36 0.89 Yes 0 0 No -25 0.83 Yes 22 45.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37036977 + NM_000249 MLH1 0 . . . 2.3 84.71 9 4.99 No 76 0.96 Yes 0 0 No -18 0.35 No 50 64.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59906115 - NM_032043 BRIP1 0 . . . 1.23 74.37 23 4.8 No 22 1.41 Yes 0 0 No -22 0.78 Yes 36 97.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68710234 + NM_133509 RAD51B 0 . . . 6.83 99.43 40 6.28 Yes 3 1.32 Yes 0 0 No -33 0.43 No 46 62.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56796556 + NM_058216 RAD51C 0 . . . 2.11 80.22 51 7.85 Yes 58 -3.88 No 0 0 No -32 0.55 No 43 37.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90947140 - NM_002485 NBN 0 . . . 1.21 0 32 5.92 Yes 64 0.11 No 0 0 No -32 0.61 No 43 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47654178 + NM_000251 MSH2 0 . . . 0.71 72 20 4.9 No 49 0.92 Yes 0 0 No -20 0.54 No 49 69.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32922037 + NM_000059 BRCA2 0 . . . 0.79 66.92 32 6 Yes 9 0.16 No 0 0 No -31 0.83 Yes 49 79.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190697377 + NM_000534 PMS1 0 . . . 3.25 80.12 21 5.19 No 8 1.06 Yes 0 0 No -20 0.67 Yes 50 84.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68854231 + NM_133509 RAD51B 0 . . . 4.49 84.15 24 6.24 Yes 11 0.95 Yes 0 0 No -23 0.41 No 47 95.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68549669 + NM_133509 RAD51B 0 . . . 8.37 92.04 28 5.28 No 8 0.76 No 0 0 No -23 0.62 No 50 81.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41020534 + NM_001164269 RAD51 0 . . . 2.81 63.76 21 5.74 Yes 41 0.65 No 0 0 No -20 0.79 Yes 48 49.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68342710 + NM_133509 RAD51B 0 . . . 1.05 62.72 32 4.34 No 24 0.56 No 0 0 No -31 0.41 No 46 37.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190666947 + NM_000534 PMS1 0 . . . 4.81 80.74 45 6.98 Yes 10 1.46 Yes 0 0 No -44 0.7 Yes 48 81.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68322264 + NM_133509 RAD51B 0 . . . 3.77 68.96 23 4.99 No 65 1.69 Yes 0 0 No -22 0.73 Yes 45 70.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190722230 + NM_000534 PMS1 0 . . . 4.95 74.86 23 5.2 No 25 -1.17 No 0 0 No -22 0.86 Yes 33 53.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23646773 - NM_024675 PALB2 0 . . . 2.41 82.19 51 6.42 Yes 4 0.16 No 0 0 No -29 0.39 No 54 65.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47778542 + NM_000251 MSH2 0 . . . 9.46 92.27 26 3.97 No 12 1.42 Yes 0 0 No -25 0.75 Yes 46 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47801604 + NM_000251 MSH2 0 . . . 2.76 72.39 25 5.1 No 56 1.05 Yes 0 0 No -24 0.65 No 43 73.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29124806 - NM_001005735 CHEK2 0 . . . 4.43 86.09 25 5.17 No 6 1.19 Yes 0 0 No -24 0.89 Yes 52 85.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90966128 - NM_002485 NBN 0 . . . 1.34 0 12 5.28 No 46 -4.68 No 0 0 No -24 0.54 No 49 60.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190736387 + NM_000534 PMS1 0 . . . 4.66 79.61 28 4.67 No 37 1.6 Yes 0 0 No -26 0.84 Yes 51 51.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68892904 + NM_133509 RAD51B 0 . . . 1.1 83.16 57 7.59 Yes 33 1.17 Yes 0 0 No -30 0.72 Yes 50 65.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47804970 + NM_000251 MSH2 0 . . . 7.79 90.68 34 5.74 Yes 58 -2.75 No 0 0 No -22 0.5 No 49 45.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75507333 - NM_001040108 MLH3 0 . . . 3.54 83.57 21 5.04 No 59 0.65 No 0 0 No -20 0.66 No 47 76.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108214204 + NM_000051 ATM 0 . . . 5.65 89.82 23 5.19 No 62 0.05 No 0 0 No -22 0.75 Yes 48 52.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108236215 + NM_000051 ATM 0 . . . 4.3 87.47 21 4.58 No 4 0.83 Yes 0 0 No -20 0.89 Yes 54 78.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52444462 - NM_004656 BAP1 0 . . . 5.48 74.59 18 4.13 No 63 1.35 Yes 0 0 No -32 0.38 No 28 42.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89624691 + NM_000314 PTEN 0 . . . 3.77 69.11 19 4.96 No 62 1.38 Yes 0 0 No -40 0.46 No 42 68.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68844359 + NM_004360 CDH1 0 . . . 5.83 79.62 22 5 No 5 1.28 Yes 0 0 No -22 0.61 No 47 60.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41278513 - NM_007294 BRCA1 0 . . . 5.1 65.66 21 4.27 No 65 -1.25 No 0 0 No -24 0.46 No 49 78.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6020307 - NM_000535 PMS2 0 . . . 3.77 69.48 27 5.48 No 59 0.78 Yes 0 0 No -27 0.49 No 42 87.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84399574 - NM_139076 FAM175A 0 . . . 1.81 0 19 5.74 Yes 8 0.72 No 0 0 No -30 0.36 No 50 81.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68994811 + NM_133509 RAD51B 0 . . . 1.38 70.23 15 3.92 No 56 -2.94 No 0 0 No -20 0.68 Yes 40 51.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68354281 + NM_133509 RAD51B 0 . . . 1.54 59.7 34 5.92 Yes 73 1.12 Yes 0 0 No -33 0.72 Yes 40 41.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68506201 + NM_133509 RAD51B 0 . . . 1.28 64.39 30 7.14 Yes 66 0.61 No 0 0 No -29 0.86 Yes 42 40.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37040377 + NM_000249 MLH1 0 . . . 4.68 75.24 14 4.21 No 10 0.09 No 0 0 No -23 0.44 No 33 70.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7576009 - NM_000546 TP53 0 . . . 2.37 72.75 10 5.57 Yes 6 2.22 Yes 0 0 No -29 0.63 No 38 58.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59777051 - NM_032043 BRIP1 0 . . . 2.23 88.28 58 7.34 Yes 10 0.76 No 0 0 No -36 0.4 No 48 68.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59767558 - NM_032043 BRIP1 0 . . . 0.19 71.97 16 6.05 Yes 55 0.29 No 0 0 No -28 0.52 No 55 45.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108216295 + NM_000051 ATM 0 . . . 1.37 67.71 22 6.56 Yes 36 0.28 No 0 0 No -21 0.73 Yes 27 36.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105185441 + NM_021930 RINT1 0 . . . 4.32 83.23 29 5.91 Yes 14 1.39 Yes 0 0 No -28 0.8 Yes 44 61.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68848273 + NM_133509 RAD51B 0 . . . 0.6 61.05 16 4.3 No 49 0.63 No 0 0 No -21 0.36 No 43 86.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68487903 + NM_133509 RAD51B 0 . . . 5.22 78.85 26 5.1 No 61 0.41 No 0 0 No -25 0.56 No 49 82.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68705418 + NM_133509 RAD51B 0 . . . 3.8 71.87 21 8.8 Yes 39 2.37 Yes 0 0 No -28 0.61 No 38 58.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29087559 - NM_001005735 CHEK2 0 . . . 0.19 72.67 50 7.34 Yes 57 0.98 Yes 0 0 No -19 0.66 No 50 79.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41244974 - NM_007294 BRCA1 0 . . . 0.91 0 24 5.87 Yes 75 -6.75 No 0 0 No -23 0.91 Yes 47 49.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68406835 + NM_133509 RAD51B 0 . . . 1.63 78.6 22 5.29 No 2 1.36 Yes 0 0 No -29 0.64 No 44 5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94196490 - NM_005591 MRE11 0 . . . 3.03 0 12 5.48 No 38 0.31 No 0 0 No -28 0.4 No 49 46.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59927884 - NM_032043 BRIP1 0 . . . 2.95 76.07 14 4.17 No 72 0.77 No 0 0 No -25 0.52 No 49 76.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45797999 - NM_001048171 MUTYH 0 . . . 0.29 77.66 17 7.08 Yes 23 -1.35 No 23 0.95 Yes -35 0.85 Yes 47 71.32 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 69059917 + NM_133509 RAD51B 0 . . . 5.07 78.52 25 4.9 No 67 0.97 Yes 0 0 No -22 0.6 No 47 88.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94199789 - NM_005591 MRE11 0 . . . 2.79 57.29 54 8.28 Yes 13 1.13 Yes 0 0 No -45 0.37 No 45 76.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68736098 + NM_133509 RAD51B 0 . . . 4.68 80.4 30 5.44 No 2 2.05 Yes 0 0 No -26 0.36 No 37 66.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23641928 - NM_024675 PALB2 0 . . . 0.83 63.34 16 4.58 No 61 1.32 Yes 0 0 No -15 0.61 No 16 44.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68717011 + NM_133509 RAD51B 0 . . . 1.21 0 68 8.2 Yes 53 1.55 Yes 0 0 No -31 0.43 No 37 87.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68533384 + NM_133509 RAD51B 0 . . . 2.16 69.59 41 6.68 Yes 32 -3.1 No 0 0 No -33 0.41 No 38 32.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68985660 + NM_133509 RAD51B 0 . . . 4.01 84.41 17 7.42 Yes 47 -3.79 No 0 0 No -20 0.24 No 48 54.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59835050 - NM_032043 BRIP1 0 . . . 8.11 81.94 13 5.48 No 34 0.49 No 0 0 No -25 0.82 Yes 44 79.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108216659 + NM_000051 ATM 0 . . . 1.46 66.56 22 6.49 Yes 9 1.18 Yes 0 0 No -21 0.93 Yes 42 65.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68915002 + NM_133509 RAD51B 0 . . . 0.64 0 21 5.2 No 25 -4.08 No 0 0 No -23 0.92 Yes 41 66.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32920071 + NM_000059 BRCA2 0 . . . 1.52 69.1 29 5.92 Yes 46 -4.12 No 0 0 No -26 0.4 No 52 81.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37040111 + NM_000249 MLH1 0 . . . 0.53 0 14 4.47 No 10 0.44 No 0 0 No -31 0.72 Yes 30 66.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105202517 + NM_021930 RINT1 0 . . . 2.04 67.17 42 6.93 Yes 46 0.66 No 0 0 No -41 0.87 Yes 34 44.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68773728 + NM_004360 CDH1 0 . . . 0.42 74.73 26 5.66 Yes 34 0.91 Yes 0 0 No -26 0.87 Yes 39 36.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215621097 - NM_000465 BARD1 0 . . . 7.12 79.86 18 4.59 No 44 -1.22 No 0 0 No -26 0.33 No 49 85.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108120478 + NM_000051 ATM 0 . . . 1.66 63.02 33 7 Yes 72 -5.61 No 0 0 No -32 0.93 Yes 43 48.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1211420 + NM_000455 STK11 0 . . . 2.31 71.04 42 6.79 Yes NA NA NA 0 0 No -30 0.54 No 45 74.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59920123 - NM_032043 BRIP1 0 . . . 3.36 66.58 73 7.65 Yes 70 0.56 No 0 0 No -45 0.5 No 49 79.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68773753 + NM_004360 CDH1 0 . . . 6.47 87.6 42 7.45 Yes 59 0.92 Yes 0 0 No -41 0.8 Yes 55 45.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89722936 + NM_000314 PTEN 0 . . . 2.81 80.74 23 4.76 No 6 1.21 Yes 0 0 No -22 0.65 No 29 68.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47743651 + NM_000251 MSH2 0 . . . 1.7 70.66 52 5.75 Yes 72 0.72 No 0 0 No -23 0.3 No 40 79.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215597720 - NM_000465 BARD1 0 . . . 0.79 67.33 11 4 No 22 0.25 No 0 0 No -26 0.86 Yes 45 72.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41269036 - NM_007294 BRCA1 0 . . . 2.87 0 22 4.54 No 3 0.36 No 0 0 No -21 0.53 No 48 89.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59833181 - NM_032043 BRIP1 0 . . . 9.56 80.26 33 5.66 Yes 15 1.58 Yes 0 0 No -32 0.56 No 43 93.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29089516 - NM_001005735 CHEK2 0 . . . 7.91 77.91 23 4.8 No 14 0.43 No 0 0 No -22 0.92 Yes 44 67.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47760194 + NM_000251 MSH2 0 . . . 1.71 84 20 4.58 No 2 1.47 Yes 0 0 No -23 0.81 Yes 22 91.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68358910 + NM_133509 RAD51B 0 . . . 3.77 69.27 64 7.92 Yes 6 1.4 Yes 0 0 No -31 0.4 No 41 93.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59824767 - NM_032043 BRIP1 0 . . . 8.42 73.8 31 5.83 Yes 21 1.52 Yes 0 0 No -30 0.78 Yes 37 80.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105187516 + NM_021930 RINT1 0 . . . 2.65 67.93 14 3.82 No 41 1.11 Yes 0 0 No -20 0.61 No 47 67.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190701006 + NM_000534 PMS1 0 . . . 0.41 64.94 13 5.48 No 67 1.61 Yes 0 0 No -27 0.58 No 56 55.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41223775 - NM_007294 BRCA1 0 . . . 3.5 68.34 20 5.48 No 21 1.71 Yes 0 0 No -20 0.49 No 37 69.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68957359 + NM_133509 RAD51B 0 . . . 5.02 85.33 9 3.87 No 61 2.18 Yes 0 0 No -29 0.48 No 42 81.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68322137 + NM_133509 RAD51B 0 . . . 7.28 85.02 41 6.4 Yes 12 1.45 Yes 0 0 No -31 0.49 No 46 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32926387 + NM_000059 BRCA2 0 . . . 6.4 72.22 25 6.46 Yes 25 0.9 Yes 0 0 No -24 0.74 Yes 33 83.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94228282 - NM_005591 MRE11 0 . . . 3.32 80.8 28 5.32 No 48 0.63 No 0 0 No -42 0.41 No 43 85.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29126762 - NM_001005735 CHEK2 0 . . . 5.68 71.29 22 4.48 No 16 1.55 Yes 0 0 No -19 0.6 No 42 96.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68867508 + NM_133509 RAD51B 0 . . . 5.91 83.67 46 5.88 Yes 27 0.23 No 0 0 No -45 0.41 No 38 55.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45795343 - NM_001048171 MUTYH 0 . . . 7.32 79.19 18 7.36 Yes -1 2.09 Yes 0 0 No -17 0.58 No 44 65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69095166 + NM_133509 RAD51B 0 . . . 1.4 70.33 19 5.45 No NA NA NA 0 0 No -20 0.41 No 39 36.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108158285 + NM_000051 ATM 0 . . . 7.64 81.56 27 5.08 No 71 0.51 No 28 0.44 Yes -26 0.71 Yes 50 58.08 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 68359806 + NM_133509 RAD51B 0 . . . 0.81 82.18 21 4.92 No -4 0.31 No 0 0 No -20 0.9 Yes 46 84.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59771834 - NM_032043 BRIP1 0 . . . 3.32 63.67 13 5.39 No 73 0.95 Yes 0 0 No -24 0.39 No 39 95.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41026206 + NM_001164269 RAD51 0 . . . 0.45 63.36 14 4.47 No 0 0.92 Yes 0 0 No -25 0.22 No 58 31.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68553970 + NM_133509 RAD51B 0 . . . 4.63 77.73 19 5.52 No 8 1.14 Yes 0 0 No -28 0.81 Yes 42 76.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190674109 + NM_000534 PMS1 0 . . . 1.26 53.02 15 4.7 No 14 0.7 No 0 0 No -23 0.59 No 44 61.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47713123 + NM_000251 MSH2 0 . . . 4.55 73.73 14 4.46 No 71 0.59 No 0 0 No -35 0.54 No 42 95.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215646030 - NM_000465 BARD1 0 . . . 5.22 0 40 6.13 Yes 20 0.55 No 0 0 No -30 0.65 No 38 91.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47752531 + NM_000251 MSH2 0 . . . 1.92 0 15 5.28 No -3 1.1 Yes 0 0 No -57 0.49 No 56 31.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47670162 + NM_000251 MSH2 0 . . . 0.55 0 33 7.47 Yes 70 0.44 No 0 0 No -32 0.84 Yes 46 64.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108225178 + NM_000051 ATM 0 . . . 0.53 0 35 4.36 No 53 -1.65 No 0 0 No -34 0.67 Yes 42 41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75516515 - NM_001040108 MLH3 0 . . . 0.92 71.08 20 4.78 No 26 1.04 Yes 0 0 No -19 0.75 Yes 32 84.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89651827 + NM_000314 PTEN 0 . . . 7.19 87 24 5.85 Yes 19 0.09 No 0 0 No -23 0.7 Yes 51 61.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68428516 + NM_133509 RAD51B 0 . . . 5.94 74.72 22 4.8 No 70 0.67 No 0 0 No -21 0.97 Yes 36 54.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32937994 + NM_000059 BRCA2 0 . . . 3.7 64.23 16 5.16 No 30 0.72 No 0 0 No -20 0.41 No 42 85.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68568902 + NM_133509 RAD51B 0 . . . 9.74 88.87 27 5.2 No NA NA NA 0 0 No -26 0.71 Yes 49 70.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23652884 - NM_024675 PALB2 0 . . . 1.64 0 23 5 No 66 -4.57 No 0 0 No -22 0.57 No 49 43.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56790888 + NM_058216 RAD51C 0 . . . 0.1 81.96 23 6.32 Yes 63 1.01 Yes 0 0 No -22 0.92 Yes 49 48.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59899336 - NM_032043 BRIP1 0 . . . 0.67 0 16 5.27 No 40 1.33 Yes 0 0 No -59 0.36 No 44 74.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68490551 + NM_133509 RAD51B 0 . . . 4.3 66.11 21 5.61 Yes 12 0.75 No 0 0 No -23 0.63 No 46 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21968640 - NM_000077 CDKN2A 0 . . . 4.67 81.88 16 5.57 Yes 34 0.76 No 0 0 No -29 0.61 No 24 23.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190651004 + NM_000534 PMS1 0 . . . 3.12 57.24 28 5.39 No 28 -2.44 No 0 0 No -27 0.76 Yes 42 65.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69138697 + NM_133509 RAD51B 0 . . . 0.72 0 12 5.74 Yes 37 0.57 No 0 0 No -29 0.83 Yes 50 69.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68612343 + NM_133509 RAD51B 0 . . . 1.87 77.52 42 7.14 Yes 7 1.27 Yes 0 0 No -22 0.82 Yes 21 69.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190714141 + NM_000534 PMS1 0 . . . 5.29 71.76 30 6.17 Yes 75 1.13 Yes 0 0 No -29 0.91 Yes 30 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33440857 - NM_002878 RAD51D 0 . . . 0.67 80.77 12 4.69 No -3 0.5 No 0 0 No -18 0.34 No 61 42.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21991508 - NM_000077 CDKN2A 0 . . . 4.05 74.21 25 5.25 No 3 0.01 No 0 0 No -25 0.61 No 46 68.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21984878 - NM_000077 CDKN2A 0 . . . 0.43 0 60 8.07 Yes 61 1.22 Yes 0 0 No -29 0.59 No 63 46.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6021562 - NM_000535 PMS2 0 . . . 4.27 77.71 24 5.92 Yes 72 0.36 No 0 0 No -23 0.94 Yes 37 54.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89644689 + NM_000314 PTEN 0 . . . 0.36 71.48 27 5.2 No 47 0.48 No 0 0 No -26 0.63 No 51 56.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68681904 + NM_133509 RAD51B 0 . . . 4.26 0 45 7.41 Yes 38 1.61 Yes 0 0 No -21 0.37 No 33 75.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56799800 + NM_058216 RAD51C 0 . . . 4.01 73.64 32 6.78 Yes 74 0.1 No 0 0 No -31 0.58 No 40 50.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84394263 - NM_139076 FAM175A 0 . . . 6.85 87.08 11 4.03 No 9 1.09 Yes 0 0 No -57 0.67 Yes 49 90.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75496657 - NM_001040108 MLH3 0 . . . 1.24 81.83 21 6.95 Yes 40 1.47 Yes 0 0 No -33 0.67 Yes 18 95.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68490254 + NM_133509 RAD51B 0 . . . 1.75 81.47 16 5.04 No 33 1.17 Yes 0 0 No -20 0.61 No 42 47.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1222026 + NM_000455 STK11 0 . . . 2.1 64.62 32 5.74 Yes 69 -1.44 No 0 0 No -26 0.4 No 52 42.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68315391 + NM_133509 RAD51B 0 . . . 0.78 0 23 5.38 No 49 0.82 Yes 0 0 No -22 0.91 Yes 50 75.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47694904 + NM_000251 MSH2 0 . . . 4.81 82.57 40 5.2 No 12 1.91 Yes 0 0 No -18 0.59 No 46 92.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131929973 + NM_005732 RAD50 0 . . . 0.72 66.43 22 4.53 No 50 0.72 No 0 0 No -21 0.39 No 44 49.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104172879 - NM_001100119 XRCC3 0 . . . 0.83 63.03 17 5.4 No 38 0.35 No 0 0 No -16 0.39 No 41 45.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59831531 - NM_032043 BRIP1 0 . . . 1.97 79.72 60 8.62 Yes 62 -3.36 No 0 0 No -40 0.67 Yes 50 50.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59940649 - NM_032043 BRIP1 0 . . . 9.58 88.57 18 4.8 No 56 0.49 No 0 0 No -56 0.89 Yes 44 92.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47636358 + NM_000251 MSH2 0 . . . 2.11 79.63 21 4.9 No 68 -4.47 No 0 0 No -26 0.6 No 47 62.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69148998 + NM_133509 RAD51B 0 . . . 0.25 56.66 32 5.71 Yes 56 0.68 No 0 0 No -31 0.59 No 41 64.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108239479 + NM_000051 ATM 0 . . . 7.91 90.78 16 6.01 Yes 15 0.21 No 0 0 No -25 0.65 No 45 77.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37076469 + NM_000249 MLH1 0 . . . 9.92 92.65 15 4.58 No 69 1.21 Yes 0 0 No -32 0.37 No 41 41.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68404185 + NM_133509 RAD51B 0 . . . 4.78 69.22 16 4.58 No 15 0.89 Yes 0 0 No -20 0.48 No 37 65.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68683398 + NM_133509 RAD51B 0 . . . 3.21 58.13 22 4.9 No 48 0.7 No 0 0 No -21 0.91 Yes 24 69.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68901724 + NM_133509 RAD51B 0 . . . 0.82 65.51 24 4.8 No 6 1.39 Yes 0 0 No -23 0.73 Yes 33 51.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41000034 + NM_001164269 RAD51 0 . . . 1.46 83.64 18 6.15 Yes 20 1.12 Yes 0 0 No -17 0.46 No 51 70.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89689007 + NM_000314 PTEN 0 . . . 2.84 0 27 5.57 Yes 39 0.85 Yes 0 0 No -26 0.55 No 32 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40997305 + NM_001164269 RAD51 0 . . . 0.43 75.72 16 4.35 No 66 0.72 No 0 0 No -15 0.29 No 48 80.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59897592 - NM_032043 BRIP1 0 . . . 2.78 69.36 16 5.4 No 58 0.42 No 0 0 No -22 0.67 Yes 56 54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68678726 + NM_133509 RAD51B 0 . . . 7.98 74.72 25 6.05 Yes 75 0.7 No 0 0 No -24 0.67 Yes 48 49.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68672949 + NM_133509 RAD51B 0 . . . 5.87 86.57 27 5.31 No 65 1.62 Yes 0 0 No -26 0.44 No 39 49.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68978922 + NM_133509 RAD51B 0 . . . 7.61 77.79 26 5.36 No 5 1.77 Yes 0 0 No -25 0.78 Yes 49 76.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6029197 - NM_000535 PMS2 0 . . . 3.25 84.71 29 7.68 Yes 8 0.65 No 0 0 No -28 0.91 Yes 50 90.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68879473 + NM_133509 RAD51B 0 . . . 0.61 75.43 29 4.6 No 24 0.35 No 0 0 No -28 0.86 Yes 26 47.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23633847 - NM_024675 PALB2 0 . . . 3.31 80.72 36 6.95 Yes 41 -4.11 No 0 0 No -23 0.72 Yes 48 62.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69061106 + NM_133509 RAD51B 0 . . . 8.08 78.93 19 4.36 No 1 0.7 No 0 0 No -24 0.59 No 42 63.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41023622 + NM_001164269 RAD51 0 . . . 1.61 85.04 24 5.3 No 17 1.14 Yes 0 0 No -31 0.76 Yes 41 91.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41274517 - NM_007294 BRCA1 0 . . . 1.07 61.77 17 5.29 No -4 0.39 No 0 0 No -16 0.42 No 20 56.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152343495 - NM_005431 XRCC2 0 . . . 1.29 60.27 16 5.82 Yes 74 -1.77 No 0 0 No -27 0.48 No 55 25.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68293663 + NM_133509 RAD51B 0 . . . 2.4 68.34 15 5.74 Yes 13 0.89 Yes 0 0 No -26 0.7 Yes 40 77.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32913657 + NM_000059 BRCA2 0 . . . 1.74 66.06 27 4.59 No 74 -3.93 No 0 0 No -51 0.62 No 37 65.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68702173 + NM_133509 RAD51B 0 . . . 0.09 74.68 21 6.48 Yes 4 0.41 No 0 0 No -20 0.55 No 54 81.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89709659 + NM_000314 PTEN 0 . . . 3.31 72.73 30 5.08 No 2 0.74 No 0 0 No -29 0.93 Yes 40 84.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131947873 + NM_005732 RAD50 0 . . . 1.39 68.88 36 7.73 Yes 72 -5.99 No 0 0 No -35 0.43 No 49 55.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68713127 + NM_133509 RAD51B 0 . . . 1.64 79.67 21 5.66 Yes 76 -5.19 No 0 0 No -25 0.59 No 47 37.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89649233 + NM_000314 PTEN 0 . . . 0.79 69.87 29 5.79 Yes 40 0.22 No 0 0 No -35 0.69 Yes 48 67.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89630327 + NM_000314 PTEN 0 . . . 2.09 73.01 23 5.27 No 67 0.36 No 0 0 No -53 0.59 No 41 67.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47679673 + NM_000251 MSH2 0 . . . 2.3 74.48 43 6.34 Yes 69 0.63 No 0 0 No -35 0.93 Yes 42 55.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131952979 + NM_005732 RAD50 0 . . . 1.2 72.58 21 4.79 No 63 -3.16 No 0 0 No -21 0.83 Yes 38 92.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68580340 + NM_133509 RAD51B 0 . . . 5.29 72.94 18 5.92 Yes 54 0.1 No 0 0 No -21 0.5 No 46 72.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75479808 - NM_001040108 MLH3 0 . . . 0.61 0 20 5.19 No 75 0.69 No 0 0 No -33 0.51 No 42 29.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23642632 - NM_024675 PALB2 0 . . . 3.65 75.88 23 4.87 No -2 1.08 Yes 0 0 No -27 0.31 No 49 68.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29138759 - NM_001005735 CHEK2 0 . . . 3.33 81.86 33 5.84 Yes 64 1.36 Yes 0 0 No -50 0.57 No 48 43.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68428802 + NM_133509 RAD51B 0 . . . 3.32 66.44 22 4.96 No 76 -4.52 No 0 0 No -21 0.84 Yes 40 33.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47698687 + NM_000251 MSH2 0 . . . 8.58 77.11 12 4.69 No 71 0.03 No 0 0 No -17 0.43 No 43 73.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90953021 - NM_002485 NBN 0 . . . 4.28 79.15 17 7 Yes 18 0.67 No 0 0 No -28 0.43 No 40 72.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89696491 + NM_000314 PTEN 0 . . . 1.48 0 13 3.02 No 11 1.54 Yes 0 0 No -21 0.9 Yes 47 65.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59790298 - NM_032043 BRIP1 0 . . . 4.04 65.46 18 4.9 No 74 0.73 No 0 0 No -17 0.64 No 49 64.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69006987 + NM_133509 RAD51B 0 . . . 7.32 72.36 38 6.32 Yes 10 0.94 Yes 0 0 No -25 0.76 Yes 48 58.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68348852 + NM_133509 RAD51B 0 . . . 0.9 68.84 16 4.69 No 39 1.73 Yes 0 0 No -23 0.88 Yes 48 36.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68285782 + NM_133509 RAD51B 0 . . . 9 86.62 17 4.8 No 74 -3.19 No 0 0 No -24 0.73 Yes 44 72.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59890830 - NM_032043 BRIP1 0 . . . 0.19 66.49 37 8.52 Yes 2 0.13 No 0 0 No -36 0.87 Yes 50 58.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68367249 + NM_133509 RAD51B 0 . . . 2.29 64.24 33 6.55 Yes 18 0.26 No 0 0 No -32 0.8 Yes 46 89.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33425058 - NM_002878 RAD51D 0 . . . 7.96 78.66 20 5.56 Yes 19 1.22 Yes 0 0 No -24 0.85 Yes 39 72.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131898261 + NM_005732 RAD50 0 . . . 6.3 79.66 23 5.37 No 47 0.62 No 0 0 No -22 0.81 Yes 40 40.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042163 - NM_000535 PMS2 0 . . . 6.23 78.86 21 6.24 Yes 31 -1.41 No 0 0 No -20 0.93 Yes 41 52.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56801734 + NM_058216 RAD51C 0 . . . 2.3 74.59 21 5.08 No 48 -3.72 No 0 0 No -20 0.62 No 50 50.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89655555 + NM_000314 PTEN 0 . . . 6.15 80.4 9 5.57 Yes 18 0.33 No 0 0 No -26 0.53 No 40 84.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68629828 + NM_133509 RAD51B 0 . . . 0.15 78.33 18 4.47 No 62 0.76 No 0 0 No -24 0.55 No 48 29.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94227742 - NM_005591 MRE11 0 . . . 5.66 81.44 21 6.22 Yes 30 1.13 Yes 0 0 No -20 0.8 Yes 47 60.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59904771 - NM_032043 BRIP1 0 . . . 1.1 0 22 4.28 No 42 0.9 Yes 0 0 No -28 0.58 No 45 42.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68367313 + NM_133509 RAD51B 0 . . . 4.61 82.97 26 3.86 No 9 0.64 No 0 0 No -20 0.82 Yes 53 59.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69039002 + NM_133509 RAD51B 0 . . . 2.74 0 38 6.47 Yes 46 1.45 Yes 0 0 No -32 0.34 No 40 63.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68441680 + NM_133509 RAD51B 0 . . . 5.37 91.54 15 4.43 No 26 1.58 Yes 0 0 No -32 0.59 No 32 50.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94150527 - NM_005591 MRE11 0 . . . 4.05 72.69 28 5.95 Yes 71 0.84 Yes 0 0 No -32 0.76 Yes 43 71.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41017283 + NM_001164269 RAD51 0 . . . 3.25 80.12 31 4.99 No 8 1.2 Yes 0 0 No -30 0.65 No 50 90.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68828493 + NM_004360 CDH1 0 . . . 1.02 64.15 26 5.4 No 28 0.7 No 0 0 No -25 0.61 No 16 28.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84406663 - NM_139076 FAM175A 0 . . . 0.06 67.56 17 6.09 Yes -4 0.3 No 0 0 No -25 0.68 Yes 52 27.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68402754 + NM_133509 RAD51B 0 . . . 2.19 82.84 29 5.84 Yes 21 0.46 No 0 0 No -28 0.43 No 51 27.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68789686 + NM_004360 CDH1 0 . . . 2.3 84.41 39 6.54 Yes 13 1.3 Yes 0 0 No -21 0.45 No 45 79.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90954151 - NM_002485 NBN 0 . . . 2.42 74.35 47 5.62 Yes 47 1.81 Yes 0 0 No -30 0.52 No 49 76.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68647281 + NM_133509 RAD51B 0 . . . 2.87 72.46 25 4.53 No 52 0.58 No 0 0 No -20 0.36 No 41 57.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29135513 - NM_001005735 CHEK2 0 . . . 4.75 81.43 38 6.32 Yes 4 1.04 Yes 0 0 No -37 0.77 Yes 54 72.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32891659 + NM_000059 BRCA2 0 . . . 0.37 0 40 6.18 Yes 32 0.28 No 0 0 No -33 0.78 Yes 26 65.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215628248 - NM_000465 BARD1 0 . . . 2.79 72.18 24 5.1 No 73 1.42 Yes 0 0 No -26 0.64 No 41 80.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108163839 + NM_000051 ATM 0 . . . 4.1 89.41 26 6.32 Yes 13 0.6 No 0 0 No -13 0.46 No 45 83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59884702 - NM_032043 BRIP1 0 . . . 4.29 76.94 35 5.66 Yes 16 0.64 No 0 0 No -25 0.37 No 42 71.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215648175 - NM_000465 BARD1 0 . . . 8.16 74.53 17 5.29 No 42 0.91 Yes 0 0 No -25 0.31 No 33 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41266837 - NM_007294 BRCA1 0 . . . 5.57 79.7 20 5.49 No 64 -3.17 No 0 0 No -27 0.56 No 39 40.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59834131 - NM_032043 BRIP1 0 . . . 2.17 73.85 26 6.03 Yes 10 0.74 No 0 0 No -25 0.64 No 47 81.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215605956 - NM_000465 BARD1 0 . . . 2.79 64.22 29 5.66 Yes 35 1.21 Yes 0 0 No -28 0.81 Yes 46 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68869403 + NM_133509 RAD51B 0 . . . 1.82 64.14 20 4.89 No 75 0.18 No 0 0 No -36 0.68 Yes 20 48.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68639695 + NM_133509 RAD51B 0 . . . 0.91 0 25 4.49 No 69 0.31 No 0 0 No -25 0.5 No 48 45.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90992513 - NM_002485 NBN 0 . . . 6.48 76.99 39 6.16 Yes 39 0.7 No 0 0 No -24 0.5 No 47 74.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47711786 + NM_000251 MSH2 0 . . . 1.71 62.76 17 4.79 No 72 -6.25 No 0 0 No -20 0.55 No 37 33.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68837634 + NM_133509 RAD51B 0 . . . 1.75 63.48 11 4.12 No 51 0.62 No 0 0 No -23 0.91 Yes 48 29.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68368822 + NM_133509 RAD51B 0 . . . 4.91 67 43 7.6 Yes 70 -5.04 No 0 0 No -24 0.62 No 47 55.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68304104 + NM_133509 RAD51B 0 . . . 4.56 0 49 4.52 No 21 1.07 Yes 0 0 No -38 0.57 No 37 95.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32888414 + NM_000059 BRCA2 0 . . . 1.8 73.52 15 4.58 No 9 0.29 No 0 0 No -22 0.42 No 48 44.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94169296 - NM_005591 MRE11 0 . . . 0.12 0 20 5.66 Yes 11 1.49 Yes 0 0 No -19 0.71 Yes 38 96.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37051720 + NM_000249 MLH1 0 . . . 4.72 89.47 12 4.05 No 9 1.46 Yes 0 0 No -19 0.75 Yes 49 94.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32914545 + NM_000059 BRCA2 0 . . . 0.22 69.57 21 7.21 Yes 66 -1.35 No 0 0 No -20 0.82 Yes 35 27.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105174599 + NM_021930 RINT1 0 . . . 1.43 66.87 26 7.75 Yes 39 1.52 Yes 0 0 No -25 0.89 Yes 13 49.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69072612 + NM_133509 RAD51B 0 . . . 3.92 70.72 26 6.55 Yes 51 2.5 Yes 0 0 No -25 0.95 Yes 57 41.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41000097 + NM_001164269 RAD51 0 . . . 3.6 85.02 46 8.49 Yes 4 1.2 Yes 0 0 No -45 0.68 Yes 54 70.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152372155 - NM_005431 XRCC2 0 . . . 3.71 85.7 57 6.9 Yes 72 -4.08 No 0 0 No -24 0.77 Yes 53 62.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23652025 - NM_024675 PALB2 0 . . . 1.36 61.4 32 5.92 Yes 0 1.08 Yes 0 0 No -31 0.83 Yes 58 74.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90953355 - NM_002485 NBN 0 . . . 0.9 65.55 22 4.5 No 59 0.97 Yes 0 0 No -21 0.8 Yes 39 52.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48020839 + NM_000179 MSH6 0 . . . 3.88 0 25 5.57 Yes 75 -3.01 No 0 0 No -24 0.42 No 54 80.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47683956 + NM_000251 MSH2 0 . . . 4.61 79.12 27 5.97 Yes 56 0.53 No 0 0 No -26 0.48 No 43 59.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69091887 + NM_133509 RAD51B 0 . . . 0.57 69.22 10 3.98 No 29 1.04 Yes 0 0 No -24 0.26 No 29 42.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47670084 + NM_000251 MSH2 0 . . . 6.6 85.38 26 4.48 No 13 0.9 Yes 0 0 No -25 0.85 Yes 45 77.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32899722 + NM_000059 BRCA2 0 . . . 2.48 89.33 20 5.26 No 50 0.04 No 0 0 No -19 0.45 No 17 88.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94155794 - NM_005591 MRE11 0 . . . 2.66 73.88 15 5.26 No 65 1.41 Yes 0 0 No -52 0.43 No 52 51.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68373026 + NM_133509 RAD51B 0 . . . 2.83 81.39 29 5.45 No 26 0.28 No 0 0 No -28 0.88 Yes 44 80.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47728188 + NM_000251 MSH2 0 . . . 3.45 68.34 19 4.69 No 23 1.57 Yes 0 0 No -18 0.79 Yes 40 55.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68764183 + NM_133509 RAD51B 0 . . . 4.38 79.74 21 4.58 No 54 0.23 No 0 0 No -38 0.35 No 39 57.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68776694 + NM_004360 CDH1 0 . . . 0.47 62.7 28 5.56 Yes -2 0.76 No 0 0 No -28 0.43 No 60 45.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59821581 - NM_032043 BRIP1 0 . . . 4.28 70.3 21 5.38 No 44 0.4 No 0 0 No -25 0.6 No 43 84.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131980581 + NM_005732 RAD50 0 . . . 0.31 81.72 20 3.84 No 12 1.13 Yes 0 0 No -29 0.73 Yes 46 67.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69094239 + NM_133509 RAD51B 0 . . . 2.38 77.54 27 6.6 Yes 55 0.55 No 0 0 No -26 0.45 No 49 76.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131970875 + NM_005732 RAD50 0 . . . 1.48 61.15 19 4.9 No 63 1.27 Yes 0 0 No -34 0.41 No 43 62.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56782378 + NM_058216 RAD51C 0 . . . 0.86 74.55 32 6.16 Yes 62 1.07 Yes 0 0 No -31 0.7 Yes 37 63.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190707925 + NM_000534 PMS1 0 . . . 4.03 85.02 23 5.04 No 4 1.02 Yes 0 0 No -22 0.89 Yes 45 73.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33437755 - NM_002878 RAD51D 0 . . . 0.11 80.62 28 6.9 Yes 8 0.45 No 0 0 No -27 0.97 Yes 50 86.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190707768 + NM_000534 PMS1 0 . . . 1.57 0 14 4.39 No 8 0.18 No 0 0 No -37 0.39 No 37 40.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47727290 + NM_000251 MSH2 0 . . . 5.55 80.91 28 3.41 No 53 0.29 No 0 0 No -28 0.49 No 47 75.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41195621 - NM_007294 BRCA1 0 . . . 9.48 82.85 22 5.42 No 68 -2.26 No 0 0 No -21 0.75 Yes 39 58.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69147707 + NM_133509 RAD51B 0 . . . 5.72 77.73 25 5.35 No 13 0.54 No 0 0 No -22 0.76 Yes 45 82.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56811057 + NM_058216 RAD51C 0 . . . 8.63 85.09 10 4 No 11 0.14 No 0 0 No -40 0.54 No 44 76.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68641184 + NM_133509 RAD51B 0 . . . 1.68 75.39 18 4.69 No -2 0.46 No 0 0 No -17 0.85 Yes 47 82.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105204014 + NM_021930 RINT1 0 . . . 6.45 82.31 49 5.68 Yes 58 0.05 No 0 0 No -25 0.75 Yes 55 40.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59915740 - NM_032043 BRIP1 0 . . . 2.4 79.57 37 6.32 Yes 7 1.02 Yes 0 0 No -36 0.55 No 51 78.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94180343 - NM_005591 MRE11 0 . . . 4.74 78 10 4 No -1 0.16 No 0 0 No -25 0.55 No 43 80.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68833298 + NM_004360 CDH1 0 . . . 3.11 72.25 20 4.56 No 57 0.93 Yes 0 0 No -19 0.58 No 52 21.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215602317 - NM_000465 BARD1 0 . . . 3.85 68.33 33 6.96 Yes 62 0.92 Yes 0 0 No -32 0.92 Yes 43 63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68492490 + NM_133509 RAD51B 0 . . . 6.5 80.1 17 4.59 No 18 1.43 Yes 0 0 No -16 0.42 No 40 91.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89696531 + NM_000314 PTEN 0 . . . 0.18 73.09 25 5.99 Yes 51 1.51 Yes 0 0 No -24 0.78 Yes 47 81.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190726744 + NM_000534 PMS1 0 . . . 2.11 68.84 29 8.61 Yes 7 2.36 Yes 0 0 No -28 0.8 Yes 51 62.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68552656 + NM_133509 RAD51B 0 . . . 1.25 75.44 23 4.69 No 65 -1.37 No 0 0 No -50 0.5 No 45 55.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131895867 + NM_005732 RAD50 0 . . . 3.19 75.11 20 4.15 No 28 2.38 Yes 0 0 No -24 0.53 No 30 60.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29092839 - NM_001005735 CHEK2 0 . . . 2.77 0 14 3.9 No 44 -2.08 No 0 0 No -22 0.77 Yes 33 55.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68879006 + NM_133509 RAD51B 0 . . . 0.73 0 33 5.73 Yes 28 2.25 Yes 0 0 No -26 0.57 No 30 89.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68799088 + NM_133509 RAD51B 0 . . . 8.02 93.66 34 5.7 Yes 5 0.2 No 0 0 No -27 0.93 Yes 38 45.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68302979 + NM_133509 RAD51B 0 . . . 3.97 78.74 31 6.4 Yes 34 0.33 No 0 0 No -30 0.89 Yes 36 59.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29126119 - NM_001005735 CHEK2 0 . . . 3.1 64.24 46 5.21 No 31 0.6 No 0 0 No -25 0.75 Yes 42 91.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32958161 + NM_000059 BRCA2 0 . . . 1.92 72.11 19 5.48 No 31 -3.02 No 0 0 No -23 0.67 Yes 51 34.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131933092 + NM_005732 RAD50 0 . . . 8.43 78.23 23 4.83 No 60 -3.63 No 0 0 No -25 0.41 No 46 59.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69047472 + NM_133509 RAD51B 0 . . . 2.54 69.12 19 6.56 Yes 39 1.89 Yes 0 0 No -26 0.67 Yes 37 74.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69108221 + NM_133509 RAD51B 0 . . . 1.9 65.77 14 4.47 No 63 1.29 Yes 0 0 No -36 0.91 Yes 50 59.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68803681 + NM_133509 RAD51B 0 . . . 2.64 64.32 38 5.11 No 2 -2 No 0 0 No -24 0.41 No 44 46.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68863156 + NM_004360 CDH1 0 . . . 2.78 83.52 23 4.12 No 18 1 Yes 0 0 No -54 0.44 No 48 67.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68497471 + NM_133509 RAD51B 0 . . . 5.7 84.97 28 5.29 No 2 0.72 No 0 0 No -27 0.55 No 44 88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29130602 - NM_001005735 CHEK2 0 . . . 0.6 0 23 4.57 No 59 0.57 No 0 0 No -22 0.85 Yes 60 39.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68665014 + NM_133509 RAD51B 0 . . . 5.25 85.7 42 6.48 Yes 17 1.81 Yes 0 0 No -22 0.54 No 41 86.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47756422 + NM_000251 MSH2 0 . . . 2.17 0 16 4.96 No 68 -4.83 No 0 0 No -25 0.58 No 50 60.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68373308 + NM_133509 RAD51B 0 . . . 5.82 0 24 4.02 No 22 0.45 No 0 0 No -23 0.63 No 46 52.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68933826 + NM_133509 RAD51B 0 . . . 6.16 69.79 23 4.99 No 9 0.8 Yes 0 0 No -22 0.87 Yes 46 75.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1214519 + NM_000455 STK11 0 . . . 8.52 78.12 12 4.24 No 25 0.33 No 0 0 No -30 0.81 Yes 33 64.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37080399 + NM_000249 MLH1 0 . . . 3.87 66.27 28 6.58 Yes 27 1.65 Yes 0 0 No -27 0.95 Yes 31 63.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68648483 + NM_133509 RAD51B 0 . . . 0.07 69.84 60 7.64 Yes 27 -2.42 No 0 0 No -36 0.52 No 59 43.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75502922 - NM_001040108 MLH3 0 . . . 4.53 71.95 29 7.03 Yes 17 0.15 No 0 0 No -28 0.79 Yes 34 51.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108166917 + NM_000051 ATM 0 . . . 3.72 77.27 20 4.32 No 38 0.5 No 0 0 No -19 0.53 No 42 80.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52434654 - NM_004656 BAP1 0 . . . 8.68 88.41 18 4.65 No 52 0.66 No 0 0 No -25 0.88 Yes 44 73.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6026731 - NM_000535 PMS2 0 . . . 5.99 74.38 47 5.53 No 26 1.46 Yes 0 0 No -29 0.73 Yes 32 51.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68298298 + NM_133509 RAD51B 0 . . . 5.72 90.92 17 5.48 No 53 0.92 Yes 0 0 No -33 0.62 No 43 76.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68860236 + NM_004360 CDH1 0 . . . 3.68 82.92 17 5.57 Yes 22 0.66 No 0 0 No -16 0.7 Yes 36 66.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68326582 + NM_133509 RAD51B 0 . . . 5.72 90.92 16 6.86 Yes 14 0.3 No 0 0 No -26 0.41 No 44 81.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94184817 - NM_005591 MRE11 0 . . . 4.37 71.8 20 5 No 65 1.04 Yes 0 0 No -26 0.65 No 44 59.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68349198 + NM_133509 RAD51B 0 . . . 7.63 76.51 15 4.95 No 69 0.58 No 0 0 No -27 0.44 No 47 84.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47778326 + NM_000251 MSH2 0 . . . 4.03 71.33 36 7.44 Yes 23 2.16 Yes 0 0 No -35 0.65 No 35 87.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59918051 - NM_032043 BRIP1 0 . . . 4.88 78.89 21 4.69 No 4 -0.95 No 0 0 No -45 0.5 No 44 82.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68285366 + NM_133509 RAD51B 0 . . . 1.57 0 35 6 Yes 62 -2.74 No 0 0 No -34 0.5 No 49 62.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190720997 + NM_000534 PMS1 0 . . . 4.96 70.08 14 3.97 No 17 0.92 Yes 0 0 No -30 0.77 Yes 51 55.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68290019 + NM_133509 RAD51B 0 . . . 4.29 70.41 14 4.47 No 64 -6.5 No 0 0 No -42 0.43 No 48 52.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69038923 + NM_133509 RAD51B 0 . . . 3.29 73.24 14 4.47 No 76 1.21 Yes 0 0 No -42 0.56 No 50 53.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68395935 + NM_133509 RAD51B 0 . . . 12.95 89.97 20 4.37 No 18 0.13 No 0 0 No -20 0.81 Yes 40 96.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68333880 + NM_133509 RAD51B 0 . . . 4.47 62.39 35 5.91 Yes 22 0.3 No 0 0 No -34 0.44 No 41 76.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41212979 - NM_007294 BRCA1 0 . . . 3.52 85.4 22 4.53 No 71 0.06 No 0 0 No -21 0.42 No 52 49.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56795696 + NM_058216 RAD51C 0 . . . 5.2 77.46 31 7.03 Yes 9 0.1 No 0 0 No -31 0.67 Yes 49 97.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29109021 - NM_001005735 CHEK2 0 . . . 0.68 61.72 47 6.11 Yes 68 -5.15 No 0 0 No -30 0.81 Yes 47 47.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68614343 + NM_133509 RAD51B 0 . . . 4.84 74.56 53 8.75 Yes 27 1.09 Yes 0 0 No -24 0.62 No 26 46.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45801336 - NM_001048171 MUTYH 0 . . . 1.12 75.18 29 5.65 Yes 35 1.08 Yes 0 0 No -28 0.93 Yes 23 62.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68364034 + NM_133509 RAD51B 0 . . . 1.83 61.64 15 5.52 No -3 0.23 No 0 0 No -48 0.45 No 61 41.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68365367 + NM_133509 RAD51B 0 . . . 3.43 62.22 42 6.48 Yes 16 0.6 No 0 0 No -41 0.67 Yes 42 82.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32967669 + NM_000059 BRCA2 0 . . . 6.98 82.44 28 5.59 Yes 54 1.15 Yes 0 0 No -27 0.34 No 42 95.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190653377 + NM_000534 PMS1 0 . . . 3.59 0 15 4.58 No 5 0.37 No 0 0 No -19 0.91 Yes 47 67.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885661 - NM_032043 BRIP1 0 . . . 1.47 60.01 31 5.49 No 29 0.69 No 0 0 No -24 0.76 Yes 31 27.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94179464 - NM_005591 MRE11 0 . . . 2.44 0 10 4.69 No 41 0.98 Yes 0 0 No -20 0.52 No 17 35.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68829233 + NM_004360 CDH1 0 . . . 1.97 0 40 6.63 Yes 39 0.72 No 0 0 No -23 0.39 No 56 29.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68699157 + NM_133509 RAD51B 0 . . . 0.57 63.05 32 6 Yes 76 -5.06 No 0 0 No -31 0.84 Yes 54 24.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68539687 + NM_133509 RAD51B 0 . . . 5.28 77.61 42 6.78 Yes 51 0.26 No 0 0 No -34 0.57 No 49 82.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68874161 + NM_133509 RAD51B 0 . . . 1.14 62.95 28 5.39 No 55 0.34 No 0 0 No -27 0.22 No 39 81.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68472214 + NM_133509 RAD51B 0 . . . 3.36 64.94 34 3.62 No 34 -2.83 No 0 0 No -26 0.64 No 49 77.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108097952 + NM_000051 ATM 0 . . . 0.11 74.73 36 4.79 No 33 1.16 Yes 0 0 No -35 0.44 No 15 52.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68489246 + NM_133509 RAD51B 0 . . . 7.33 84.52 17 5.29 No -4 0.21 No 0 0 No -22 0.84 Yes 43 63.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89633246 + NM_000314 PTEN 0 . . . 11.76 83.52 21 5.74 Yes 9 1.12 Yes 0 0 No -20 0.88 Yes 49 67.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215637055 - NM_000465 BARD1 0 . . . 8.42 90.74 13 4.67 No -1 0.47 No 0 0 No -25 0.46 No 51 71.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59842536 - NM_032043 BRIP1 0 . . . 3.71 74.74 14 4.39 No 70 -4.74 No 0 0 No -27 0.7 Yes 37 44.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68499955 + NM_133509 RAD51B 0 . . . 3.81 66.19 21 4.69 No 52 0.32 No 0 0 No -23 0.46 No 51 61.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94162467 - NM_005591 MRE11 0 . . . 1.59 58.88 22 4.58 No 43 0.64 No 0 0 No -19 0.84 Yes 45 46.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68933024 + NM_133509 RAD51B 0 . . . 6.75 78.24 24 5.29 No 11 0.69 No 0 0 No -23 0.77 Yes 41 94.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68849970 + NM_004360 CDH1 0 . . . 0.43 0 11 4.12 No 7 1.25 Yes 0 0 No -32 0.3 No 24 60.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68674797 + NM_133509 RAD51B 0 . . . 6.91 80.72 29 5.57 Yes 5 1.2 Yes 0 0 No -24 0.31 No 43 69.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68459486 + NM_133509 RAD51B 0 . . . 10.18 92.63 36 5.84 Yes 56 0.7 No 0 0 No -25 0.59 No 43 92.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23630215 - NM_024675 PALB2 0 . . . 5.44 79.72 12 4.22 No 29 0.66 No 0 0 No -28 0.89 Yes 52 72.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59813980 - NM_032043 BRIP1 0 . . . 2.13 67.5 9 3.87 No 17 0.91 Yes 0 0 No -28 0.63 No 41 76.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56788624 + NM_058216 RAD51C 0 . . . 0.22 63.42 16 5.2 No 36 0.96 Yes 0 0 No -20 0.46 No 56 17.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29104140 - NM_001005735 CHEK2 0 . . . 0.13 69.01 17 5.85 Yes 3 -0.46 No 0 0 No -16 0.73 Yes 52 64.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48006838 + NM_000179 MSH6 0 . . . 1.57 76.53 23 3.49 No 56 1.47 Yes 0 0 No -19 0.56 No 54 64.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68364622 + NM_133509 RAD51B 0 . . . 1.1 79.83 21 5.56 Yes 13 1.5 Yes 0 0 No -55 0.54 No 45 69.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40996373 + NM_001164269 RAD51 0 . . . 4.55 72.54 15 4.73 No 16 1.31 Yes 0 0 No -21 0.6 No 42 94.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40996088 + NM_001164269 RAD51 0 . . . 7.14 85.5 14 4.78 No 44 2.64 Yes 0 0 No -24 0.53 No 14 74.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59808668 - NM_032043 BRIP1 0 . . . 2.64 76.34 41 6.93 Yes 76 -6.2 No 0 0 No -28 0.41 No 48 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68564029 + NM_133509 RAD51B 0 . . . 1.33 81.73 13 3.12 No 16 0.89 Yes 0 0 No -20 0.28 No 42 70.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68294427 + NM_133509 RAD51B 0 . . . 8.2 86.4 32 5.03 No -3 0.41 No 0 0 No -27 0.71 Yes 43 86.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68668003 + NM_133509 RAD51B 0 . . . 4.22 71.7 17 4.69 No 62 0.51 No 0 0 No -24 0.78 Yes 42 92.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21992816 - NM_000077 CDKN2A 0 . . . 1.17 82.66 18 4.8 No 36 0.54 No 0 0 No -25 0.53 No 49 88.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94172882 - NM_005591 MRE11 0 . . . 3.58 78.92 31 5.74 Yes 18 0.64 No 0 0 No -30 0.65 No 45 57.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75500311 - NM_001040108 MLH3 0 . . . 5.81 89.01 20 3.19 No 32 0.51 No 0 0 No -17 0.76 Yes 46 34.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105191661 + NM_021930 RINT1 0 . . . 7.95 86.16 24 4.9 No 70 0.77 Yes 0 0 No -20 0.6 No 50 65.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68525202 + NM_133509 RAD51B 0 . . . 1.78 77.11 46 5.77 Yes 52 1.4 Yes 0 0 No -30 0.7 Yes 46 58.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108190101 + NM_000051 ATM 0 . . . 9.77 96.95 28 6.66 Yes 60 0.44 No 0 0 No -27 0.91 Yes 43 92.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23651654 - NM_024675 PALB2 0 . . . 7.07 81.24 26 4.45 No 60 -0.79 No 0 0 No -16 0.65 No 50 63.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68471531 + NM_133509 RAD51B 0 . . . 8.01 77.81 23 5.1 No 23 1.47 Yes 0 0 No -22 0.73 Yes 47 60.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7565907 - NM_000546 TP53 0 . . . 1.29 61.71 36 7.36 Yes 55 0.04 No 0 0 No -35 0.39 No 51 37.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152372639 - NM_005431 XRCC2 0 . . . 2.34 0 32 5.68 Yes 24 1.67 Yes 0 0 No -46 0.4 No 44 76.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69018914 + NM_133509 RAD51B 0 . . . 5.52 82.05 14 5.11 No 31 0.05 No 0 0 No -58 0.48 No 44 56.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215633741 - NM_000465 BARD1 0 . . . 1.98 0 23 4.5 No 55 0.56 No 0 0 No -33 0.59 No 55 57.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69012633 + NM_133509 RAD51B 0 . . . 1.45 77.88 22 4.82 No 36 1.19 Yes 0 0 No -21 0.43 No 40 50.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32899005 + NM_000059 BRCA2 0 . . . 0.63 80.65 23 4.85 No 44 1.5 Yes 0 0 No -22 0.71 Yes 50 80 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68699911 + NM_133509 RAD51B 0 . . . 8.82 79.3 11 5.92 Yes 13 1.6 Yes 0 0 No -28 0.53 No 45 68.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41239181 - NM_007294 BRCA1 0 . . . 1.77 65.86 18 6.08 Yes 20 1.23 Yes 0 0 No -21 0.56 No 49 40.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68452065 + NM_133509 RAD51B 0 . . . 0.81 71.17 24 4.99 No 64 -2.14 No 0 0 No -18 0.54 No 48 30.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68821773 + NM_004360 CDH1 0 . . . 5.41 90.92 13 5.01 No 34 1.48 Yes 0 0 No -19 0.75 Yes 24 92.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41268955 - NM_007294 BRCA1 0 . . . 4.34 69.05 21 4.89 No 49 -4.46 No 0 0 No -20 0.68 Yes 51 37.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41258031 - NM_007294 BRCA1 0 . . . 2.06 0 20 4.92 No 37 1.47 Yes 0 0 No -32 0.16 No 21 78.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59786989 - NM_032043 BRIP1 0 . . . 7.66 86.89 39 5.65 Yes 69 0.46 No 0 0 No -38 0.68 Yes 39 53.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32936240 + NM_000059 BRCA2 0 . . . 4.16 76.09 19 4.99 No 36 1.46 Yes 0 0 No -38 0.37 No 44 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68594220 + NM_133509 RAD51B 0 . . . 3.31 79.33 26 7.44 Yes 63 -4.41 No 0 0 No -25 0.79 Yes 34 83.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68676364 + NM_133509 RAD51B 0 . . . 1.7 70.84 13 4.55 No 4 0.62 No 0 0 No -27 0.72 Yes 39 67.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29104938 - NM_001005735 CHEK2 0 . . . 3.97 84.41 44 7.26 Yes 46 0.91 Yes 0 0 No -30 0.33 No 23 84.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84385622 - NM_139076 FAM175A 0 . . . 2.36 69.76 19 4.69 No 32 1.05 Yes 0 0 No -23 0.74 Yes 26 95.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47703100 + NM_000251 MSH2 0 . . . 1.16 62.59 27 6.65 Yes 1 0.37 No 0 0 No -37 0.51 No 48 78.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32888875 + NM_000059 BRCA2 0 . . . 4.11 79.62 21 4.9 No 66 1.08 Yes 0 0 No -20 0.88 Yes 36 73.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68597041 + NM_133509 RAD51B 0 . . . 0.28 73.24 15 5.48 No 68 1.53 Yes 0 0 No -23 0.79 Yes 40 62.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7573832 - NM_000546 TP53 0 . . . 3.15 75.21 21 4.51 No 76 1.95 Yes 0 0 No -21 0.79 Yes 49 86.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37076518 + NM_000249 MLH1 0 . . . 1.57 64.06 28 5.52 No 6 0.27 No 0 0 No -27 0.66 No 37 62.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68740447 + NM_133509 RAD51B 0 . . . 5.74 82.32 18 4.8 No 61 0.56 No 0 0 No -40 0.37 No 42 84.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59898744 - NM_032043 BRIP1 0 . . . 2.84 69.94 16 4.41 No 5 1.59 Yes 0 0 No -19 0.41 No 53 55.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59923014 - NM_032043 BRIP1 0 . . . 0.48 69.12 29 5.88 Yes 32 1.18 Yes 0 0 No -28 0.49 No 43 81.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56794346 + NM_058216 RAD51C 0 . . . 5.52 78.96 25 5.57 Yes 7 1.23 Yes 0 0 No -24 0.78 Yes 51 89.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94149565 - NM_005591 MRE11 0 . . . 2.62 69.76 15 5.68 Yes 68 0.45 No 0 0 No -26 0.36 No 27 89.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84403752 - NM_139076 FAM175A 0 . . . 0.75 65.64 21 5.51 No 72 1.46 Yes 0 0 No -20 0.38 No 29 57.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94190790 - NM_005591 MRE11 0 . . . 0.73 0 37 4.58 No 7 1.38 Yes 0 0 No -20 0.78 Yes 51 93.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41013962 + NM_001164269 RAD51 0 . . . 1.15 50.2 29 7.35 Yes 73 -5.9 No 0 0 No -28 0.91 Yes 40 41.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33437350 - NM_002878 RAD51D 0 . . . 0.39 67.68 12 4.8 No 54 -3.41 No 0 0 No -19 0.49 No 50 87.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68693918 + NM_133509 RAD51B 0 . . . 0.31 71.03 42 8.18 Yes 7 0.5 No 0 0 No -41 0.88 Yes 47 60.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190677433 + NM_000534 PMS1 0 . . . 2.18 68.84 33 5.69 Yes 9 0.05 No 0 0 No -26 0.73 Yes 36 83.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32969612 + NM_000059 BRCA2 0 . . . 2.5 68.13 19 4.22 No 20 0.49 No 0 0 No -22 0.49 No 34 92.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21969160 - NM_000077 CDKN2A 0 . . . 5.8 74.3 15 5.19 No 18 0.68 No 0 0 No -23 0.67 Yes 48 59.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84393077 - NM_139076 FAM175A 0 . . . 6.04 70.22 16 5.77 Yes 58 1.33 Yes 0 0 No -27 0.5 No 27 37.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23636435 - NM_024675 PALB2 0 . . . 0.11 71.27 25 4.98 No 3 2.01 Yes 0 0 No -24 0.88 Yes 55 77.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68555783 + NM_133509 RAD51B 0 . . . 1.58 74.78 19 4.22 No 24 1.07 Yes 0 0 No -18 0.53 No 34 93.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59917181 - NM_032043 BRIP1 0 . . . 0.77 0 32 5.57 Yes 31 0.54 No 0 0 No -24 0.39 No 40 55.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68975510 + NM_133509 RAD51B 0 . . . 4.52 70.64 18 4.96 No 50 0.69 No 0 0 No -24 0.39 No 52 76.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47657505 + NM_000251 MSH2 0 . . . 2.97 82.99 21 4.05 No 71 1.5 Yes 0 0 No -31 0.67 Yes 54 42.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6034531 - NM_000535 PMS2 0 . . . 5.7 73.2 46 6.18 Yes 55 0.75 No 0 0 No -30 0.9 Yes 50 58.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41259781 - NM_007294 BRCA1 0 . . . 1.32 0 20 4.8 No 13 0.96 Yes 0 0 No -19 0.63 No 45 80.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68765284 + NM_133509 RAD51B 0 . . . 5.61 85.31 20 5 No 13 1.51 Yes 0 0 No -45 0.72 Yes 45 95.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68719911 + NM_133509 RAD51B 0 . . . 3.74 82.02 25 4.9 No 1 0.47 No 0 0 No -24 0.82 Yes 50 65.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37038791 + NM_000249 MLH1 0 . . . 0.64 70.88 51 7.24 Yes 50 -3.56 No 0 0 No -44 0.79 Yes 48 53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32943298 + NM_000059 BRCA2 0 . . . 4.76 76.18 40 5.28 No 15 1.55 Yes 0 0 No -32 0.46 No 43 64.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108185252 + NM_000051 ATM 0 . . . 3.8 72.36 14 4.47 No 60 0.69 No 0 0 No -45 0.97 Yes 42 94.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68828160 + NM_133509 RAD51B 0 . . . 1.83 76.63 14 5.38 No 22 0.26 No 0 0 No -22 0.34 No 49 79.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68649009 + NM_133509 RAD51B 0 . . . 0.01 0 53 7.42 Yes 35 1.16 Yes 0 0 No -52 0.64 No 35 59.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32954796 + NM_000059 BRCA2 0 . . . 5.21 84.22 34 7.46 Yes 76 1.49 Yes 0 0 No -33 0.65 No 50 95.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94190264 - NM_005591 MRE11 0 . . . 3.53 82.6 19 8.99 Yes 7 1.03 Yes 0 0 No -28 0.85 Yes 37 91.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32972245 + NM_000059 BRCA2 0 . . . 2.18 75.33 13 5.1 No 63 -3.76 No 0 0 No -25 0.58 No 47 74.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59839026 - NM_032043 BRIP1 0 . . . 7.68 81.17 36 6.82 Yes 32 0.84 Yes 0 0 No -35 0.54 No 36 78.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68518802 + NM_133509 RAD51B 0 . . . 0.35 57.59 23 4.26 No 30 0.68 No 0 0 No -21 0.91 Yes 46 58.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89654425 + NM_000314 PTEN 0 . . . 4.51 69.83 25 5.29 No 6 1.55 Yes 0 0 No -24 0.7 Yes 52 51.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131917331 + NM_005732 RAD50 0 . . . 2.3 75.88 24 5.48 No 60 -2.81 No 0 0 No -43 0.71 Yes 37 85.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89670447 + NM_000314 PTEN 0 . . . 6.42 71.57 32 6.08 Yes 9 1.28 Yes 0 0 No -29 0.43 No 49 77.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59793359 - NM_032043 BRIP1 0 . . . 3.24 72.52 21 5.09 No 29 1.43 Yes 0 0 No -20 0.82 Yes 46 57.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68869307 + NM_133509 RAD51B 0 . . . 0.54 75.64 12 4.9 No 72 0.37 No 0 0 No -20 0.36 No 61 43.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47721942 + NM_000251 MSH2 0 . . . 5.99 86.04 26 7.21 Yes 3 1.7 Yes 0 0 No -25 0.91 Yes 37 85.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68376636 + NM_133509 RAD51B 0 . . . 4.43 71.63 23 4.4 No 18 0.81 Yes 0 0 No -23 0.88 Yes 40 91.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215603122 - NM_000465 BARD1 0 . . . 4.46 73.12 26 6.16 Yes 15 0.23 No 0 0 No -24 0.38 No 40 92.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47658963 + NM_000251 MSH2 0 . . . 3.39 66.2 32 8.5 Yes 55 1 Yes 0 0 No -31 0.56 No 48 80.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68478611 + NM_133509 RAD51B 0 . . . 2.87 75.77 16 5.15 No 14 1.42 Yes 0 0 No -20 0.34 No 44 98.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69083721 + NM_133509 RAD51B 0 . . . 6.11 72.92 21 5.98 Yes 42 0.65 No 0 0 No -31 0.44 No 16 39.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68371518 + NM_133509 RAD51B 0 . . . 9.15 75.38 17 4.58 No 35 0.89 Yes 0 0 No -35 0.48 No 23 48.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37085443 + NM_000249 MLH1 0 . . . 4.62 86.16 30 5.39 No 22 0.75 No 0 0 No -29 0.87 Yes 48 74.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68991541 + NM_133509 RAD51B 0 . . . 2.84 0 46 6.01 Yes 70 0.05 No 0 0 No -45 0.63 No 45 87.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32968697 + NM_000059 BRCA2 0 . . . 4.28 74.23 21 4.88 No 75 0.21 No 0 0 No -20 0.34 No 52 42.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215648328 - NM_000465 BARD1 0 . . . 0.42 67.3 20 5.1 No 6 -2.66 No 0 0 No -39 0.76 Yes 53 36.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190704701 + NM_000534 PMS1 0 . . . 2.19 59.62 25 5.1 No 30 1.68 Yes 0 0 No -24 0.49 No 22 80.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21987047 - NM_000077 CDKN2A 0 . . . 3.77 72.39 29 5.39 No 34 0.63 No 0 0 No -28 0.32 No 42 59.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56787454 + NM_058216 RAD51C 0 . . . 1.89 54.95 21 5.04 No 1 0.34 No 0 0 No -29 0.47 No 40 42.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68733135 + NM_133509 RAD51B 0 . . . 0.55 0 65 8.03 Yes 75 -3.1 No 0 0 No -28 0.61 No 36 39.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108108748 + NM_000051 ATM 0 . . . 6.35 78.82 24 4.98 No 9 0.89 Yes 0 0 No -21 0.76 Yes 44 73.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190741951 + NM_000534 PMS1 0 . . . 1.47 77.61 28 6.32 Yes 0 0.67 No 0 0 No -27 0.8 Yes 26 67.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68801591 + NM_133509 RAD51B 0 . . . 4.4 80.17 28 5.24 No 72 -2.72 No 0 0 No -42 0.53 No 47 61.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56811242 + NM_058216 RAD51C 0 . . . 2.98 68.84 13 4.97 No 34 -2.13 No 0 0 No -24 0.41 No 48 44.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29087301 - NM_001005735 CHEK2 0 . . . 2.94 80.12 29 5.47 No 7 0.63 No 0 0 No -28 0.87 Yes 51 77.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6042538 - NM_000535 PMS2 0 . . . 0.82 59.48 27 6.39 Yes 71 0.3 No 0 0 No -26 0.94 Yes 31 70.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69148914 + NM_133509 RAD51B 0 . . . 4.6 84.93 25 5.21 No 3 0.33 No 0 0 No -24 0.63 No 45 78.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32969754 + NM_000059 BRCA2 0 . . . 1.1 70.98 53 5.56 Yes 22 0.08 No 0 0 No -39 0.9 Yes 48 71.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68934509 + NM_133509 RAD51B 0 . . . 3.54 78.88 27 5.04 No 0 0.56 No 0 0 No -26 0.91 Yes 52 81.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41206154 - NM_007294 BRCA1 0 . . . 5.72 72.93 24 6.16 Yes 60 0.63 No 0 0 No -23 0.82 Yes 44 67.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68415300 + NM_133509 RAD51B 0 . . . 1.85 61.64 14 4.47 No 23 0.94 Yes 0 0 No -21 0.64 No 39 69.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68479691 + NM_133509 RAD51B 0 . . . 6.96 73.73 42 8.12 Yes 53 -2.92 No 0 0 No -24 0.68 Yes 40 66.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108118664 + NM_000051 ATM 0 . . . 4.72 76.3 17 6.63 Yes 0 0.9 Yes 0 0 No -39 0.57 No 41 69.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68358218 + NM_133509 RAD51B 0 . . . 3.97 79.7 20 4.18 No 61 0.43 No 0 0 No -45 0.53 No 46 51.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47737135 + NM_000251 MSH2 0 . . . 8.27 85.91 16 5.2 No 36 1.76 Yes 0 0 No -25 0.75 Yes 27 53.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68409593 + NM_133509 RAD51B 0 . . . 3.11 71.78 21 6.56 Yes 27 0.89 Yes 0 0 No -20 0.81 Yes 52 43.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47683412 + NM_000251 MSH2 0 . . . 4.26 89.51 35 5.86 Yes 4 0.66 No 0 0 No -22 0.51 No 54 53.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40990488 + NM_001164269 RAD51 0 . . . 3.33 69.49 21 5.66 Yes 16 1.13 Yes 0 0 No -20 0.76 Yes 42 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847241 + NM_133509 RAD51B 0 . . . 1.88 67 37 6.14 Yes 61 0.27 No 0 0 No -36 0.7 Yes 50 77.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68354823 + NM_133509 RAD51B 0 . . . 2.41 67.75 19 4.5 No 73 0.19 No 0 0 No -18 0.66 Yes 45 39.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69034432 + NM_133509 RAD51B 0 . . . 3.43 71.15 38 5.72 Yes 44 0 No 0 0 No -24 0.38 No 11 28.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69029894 + NM_133509 RAD51B 0 . . . 3.38 0 26 5 No -4 0.51 No 0 0 No -25 0.48 No 40 53.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84385777 - NM_139076 FAM175A 0 . . . 3.36 81.72 36 4.91 No 56 0.45 No 0 0 No -22 0.61 No 49 82.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47663152 + NM_000251 MSH2 0 . . . 0.66 0 29 4.5 No 71 0.01 No 0 0 No -33 0.6 No 42 75.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89649876 + NM_000314 PTEN 0 . . . 3.6 76.58 19 4.69 No -1 0.01 No 0 0 No -19 0.35 No 47 62.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94224266 - NM_005591 MRE11 0 . . . 0.43 0 37 9.18 Yes 36 -4.15 No 0 0 No -36 0.71 Yes 40 63.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68363324 + NM_133509 RAD51B 0 . . . 3.58 72.67 25 5.21 No 59 0.41 No 0 0 No -24 0.61 No 57 38.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344895 + NM_133509 RAD51B 0 . . . 8.28 80.1 10 4.78 No 21 0.03 No 0 0 No -30 0.3 No 31 34.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68409000 + NM_133509 RAD51B 0 . . . 3.76 80.09 27 5.31 No 3 1.4 Yes 0 0 No -26 0.68 Yes 46 88.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90955876 - NM_002485 NBN 0 . . . 1.38 64.93 36 4.52 No 20 0.16 No 0 0 No -35 0.44 No 38 82.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56811904 + NM_058216 RAD51C 0 . . . 10.36 87.31 22 4.54 No 5 1.22 Yes 0 0 No -21 0.53 No 42 81.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6022409 - NM_000535 PMS2 0 . . . 5.24 69.07 23 5.39 No 31 0.38 No 0 0 No -22 0.46 No 43 79.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90983593 - NM_002485 NBN 0 . . . 1.52 0 31 5.92 Yes 6 0.16 No 0 0 No -30 0.88 Yes 34 66.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68950124 + NM_133509 RAD51B 0 . . . 2.74 70.05 21 5.1 No 2 0.23 No 0 0 No -20 0.86 Yes 49 53.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59792652 - NM_032043 BRIP1 0 . . . 5.34 80.61 14 3.53 No 56 0.67 No 0 0 No -17 0.32 No 36 59.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68576564 + NM_133509 RAD51B 0 . . . 3.13 0 18 3.92 No 48 1 Yes 0 0 No -27 0.48 No 40 72.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108167917 + NM_000051 ATM 0 . . . 6.58 79 18 4.9 No 15 0.44 No 0 0 No -20 0.85 Yes 40 67.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68415842 + NM_133509 RAD51B 0 . . . 0.51 67.11 22 5.68 Yes 50 -3.3 No 0 0 No -21 0.77 Yes 48 48.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56798070 + NM_058216 RAD51C 0 . . . 0.81 69.08 9 4.36 No 59 0.55 No 30 0.87 Yes -37 0.88 Yes 52 65.34 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 47663629 + NM_000251 MSH2 0 . . . 3.48 90.41 28 5.66 Yes 26 1.45 Yes 0 0 No -27 0.79 Yes 50 79.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108237900 + NM_000051 ATM 0 . . . 6.02 80.12 28 4.76 No 8 1.25 Yes 0 0 No -27 0.74 Yes 50 90.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32937608 + NM_000059 BRCA2 0 . . . 1.82 77.67 21 4.63 No 22 0.74 No 0 0 No -20 0.41 No 46 45.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108200098 + NM_000051 ATM 0 . . . 2.8 72.24 28 6.24 Yes 47 1.24 Yes 0 0 No -27 0.71 Yes 47 52.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68781055 + NM_133509 RAD51B 0 . . . 6.55 74.09 36 6.28 Yes 35 2.59 Yes 0 0 No -26 0.63 No 35 70.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68690597 + NM_133509 RAD51B 0 . . . 3.16 67.65 24 4.4 No 38 1.55 Yes 0 0 No -23 0.64 No 40 72.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108178957 + NM_000051 ATM 0 . . . 5.04 74.52 24 4.01 No 16 1.39 Yes 0 0 No -26 0.51 No 42 72.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68813015 + NM_133509 RAD51B 0 . . . 0.24 0 11 5.29 No 24 0.62 No 0 0 No -21 0.72 Yes 46 86.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75516261 - NM_001040108 MLH3 0 . . . 2.5 81.44 17 5.32 No 69 -4.32 No 0 0 No -16 0.3 No 51 81.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1212461 + NM_000455 STK11 0 . . . 2.45 81.92 33 5.83 Yes NA NA NA 0 0 No -32 0.44 No 42 76.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108193923 + NM_000051 ATM 0 . . . 2.06 55.36 16 4.69 No 11 0.48 No 0 0 No -26 0.65 No 44 33.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69148005 + NM_133509 RAD51B 0 . . . 0.91 0 15 5.56 Yes 53 -3.24 No 0 0 No -24 0.7 Yes 42 52.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94216243 - NM_005591 MRE11 0 . . . 6.25 71.37 17 4.24 No 8 1 Yes 0 0 No -40 0.38 No 44 74.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68650140 + NM_133509 RAD51B 0 . . . 1.82 0 29 5.92 Yes 37 0.49 No 0 0 No -28 0.94 Yes 29 67.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59801952 - NM_032043 BRIP1 0 . . . 4.58 78.14 9 4.09 No 73 0.73 No 0 0 No -39 0.34 No 43 26.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41256250 - NM_007294 BRCA1 0 . . . 1.4 70.3 32 3.85 No 52 1.37 Yes 0 0 No -34 0.62 No 11 35.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131968981 + NM_005732 RAD50 0 . . . 2.49 78.03 18 4.69 No 7 1.38 Yes 0 0 No -17 0.7 Yes 51 86.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68796939 + NM_004360 CDH1 0 . . . 9.79 86.04 29 5.73 Yes 7 0.73 No 0 0 No -28 0.76 Yes 42 32.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75483998 - NM_001040108 MLH3 0 . . . 7.51 84.9 33 5.82 Yes 19 1.72 Yes 0 0 No -28 0.38 No 39 80.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56777922 + NM_058216 RAD51C 0 . . . 4.42 84.22 17 5.54 No 8 1.13 Yes 0 0 No -28 0.81 Yes 50 95.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37064329 + NM_000249 MLH1 0 . . . 5.43 92.07 15 5.3 No 54 0.93 Yes 0 0 No -24 0.62 No 42 80.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47717546 + NM_000251 MSH2 0 . . . 1.02 68.36 17 3.71 No 59 1.47 Yes 0 0 No -45 0.71 Yes 42 88.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131931104 + NM_005732 RAD50 0 . . . 1.64 69.57 25 4.25 No 42 0.67 No 0 0 No -24 0.96 Yes 37 68.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68960883 + NM_133509 RAD51B 0 . . . 0.1 74.68 11 4.48 No 57 0.64 No 0 0 No -38 0.94 Yes 52 45.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59848897 - NM_032043 BRIP1 0 . . . 4.4 80.34 35 7.27 Yes 72 -2.42 No 0 0 No -34 0.98 Yes 37 78.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69097402 + NM_133509 RAD51B 0 . . . 0.05 75.77 29 4.26 No 71 0.36 No 0 0 No -32 0.68 Yes 50 76.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47785425 + NM_000251 MSH2 0 . . . 1.56 66.61 27 5.25 No 67 -4.24 No 0 0 No -26 0.74 Yes 44 73.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90956394 - NM_002485 NBN 0 . . . 6.36 80.39 25 5.57 Yes 64 0.8 Yes 0 0 No -25 0.64 No 27 90.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131936385 + NM_005732 RAD50 0 . . . 2.58 0 30 4.77 No 62 1.59 Yes 0 0 No -20 0.79 Yes 39 82.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108127312 + NM_000051 ATM 0 . . . 3.82 73.93 25 6.24 Yes 64 0.55 No 0 0 No -24 0.72 Yes 48 55.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68508539 + NM_133509 RAD51B 0 . . . 5.49 80.68 28 5.67 Yes 64 2.5 Yes 0 0 No -27 0.56 No 46 75.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108195143 + NM_000051 ATM 0 . . . 5.4 73.53 46 6.7 Yes 49 0.49 No 0 0 No -36 0.51 No 40 66.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190673722 + NM_000534 PMS1 0 . . . 0.97 0 33 5.02 No 26 0.48 No 0 0 No -25 0.62 No 48 49.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68394064 + NM_133509 RAD51B 0 . . . 6.16 68.59 11 4.12 No 45 0.41 No 0 0 No -35 0.4 No 43 96.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215643500 - NM_000465 BARD1 0 . . . 6.76 86.68 19 4.36 No 64 1.26 Yes 0 0 No -31 0.61 No 54 73.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68819224 + NM_133509 RAD51B 0 . . . 0.71 76.79 17 6.93 Yes 71 2.15 Yes 0 0 No -27 0.43 No 46 65.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45801365 - NM_001048171 MUTYH 0 . . . 3.47 79.61 21 5.83 Yes 6 1.12 Yes 0 0 No -20 0.56 No 52 79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7568684 - NM_000546 TP53 0 . . . 4.07 83.24 11 4.12 No 53 0.67 No 0 0 No -28 0.93 Yes 16 79.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32966003 + NM_000059 BRCA2 0 . . . 2.78 71.37 22 6.73 Yes 67 0.75 No 0 0 No -21 0.54 No 36 49.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47631429 + NM_000251 MSH2 0 . . . 4.03 77.58 18 4.36 No 11 0.91 Yes 0 0 No -36 0.87 Yes 47 88.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190652578 + NM_000534 PMS1 0 . . . 1.9 68.01 26 5.48 No 63 -5.31 No 0 0 No -25 0.89 Yes 49 52.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108227566 + NM_000051 ATM 0 . . . 1.75 77.2 18 4.59 No 63 0.4 No 0 0 No -24 0.6 No 41 59.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69034562 + NM_133509 RAD51B 0 . . . 2.58 70.57 22 5.29 No 29 0.08 No 0 0 No -21 0.76 Yes 45 69.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68747363 + NM_133509 RAD51B 0 . . . 2.6 0 31 5.66 Yes 30 0.83 Yes 0 0 No -29 0.8 Yes 28 80.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69062833 + NM_133509 RAD51B 0 . . . 1.43 81.42 21 4.66 No 35 0.6 No 0 0 No -20 0.76 Yes 23 80.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89719851 + NM_000314 PTEN 0 . . . 4.59 68.96 20 5 No 68 0.16 No 0 0 No -28 0.51 No 46 37.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190735005 + NM_000534 PMS1 0 . . . 1.54 76.46 24 6.92 Yes 36 0.79 Yes 0 0 No -26 0.79 Yes 50 86.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190694382 + NM_000534 PMS1 0 . . . 2.37 62.9 23 6.39 Yes 47 0.21 No 0 0 No -22 0.88 Yes 53 44.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68354659 + NM_133509 RAD51B 0 . . . 4.1 81.58 21 5.7 Yes 56 0.63 No 0 0 No -20 0.84 Yes 50 53.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23636923 - NM_024675 PALB2 0 . . . 3.23 79.24 15 4.62 No 35 1.23 Yes 0 0 No -26 0.57 No 23 76.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68988651 + NM_133509 RAD51B 0 . . . 5.33 80.3 17 5.89 Yes 71 0.67 No 0 0 No -16 0.66 No 45 54.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37065176 + NM_000249 MLH1 0 . . . 2.78 75.88 18 4.15 No 20 0.37 No 0 0 No -41 0.68 Yes 38 85.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68807840 + NM_004360 CDH1 0 . . . 5.92 83.78 17 5.71 Yes 12 1.27 Yes 0 0 No -16 0.19 No 46 66.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68620099 + NM_133509 RAD51B 0 . . . 1.13 64.12 54 7.88 Yes 25 1.07 Yes 0 0 No -25 0.85 Yes 58 51.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68942921 + NM_133509 RAD51B 0 . . . 1.98 79.84 25 5.94 Yes 55 0.82 Yes 0 0 No -27 0.65 No 59 52.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69130264 + NM_133509 RAD51B 0 . . . 6.53 81.31 28 5.79 Yes 57 0.83 Yes 0 0 No -27 0.41 No 47 82.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29084438 - NM_001005735 CHEK2 0 . . . 1.38 78.48 21 6 Yes 59 0.88 Yes 0 0 No -23 0.43 No 42 80.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108166724 + NM_000051 ATM 0 . . . 0.13 57.26 35 6.4 Yes 10 1 Yes 0 0 No -34 0.78 Yes 37 68.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23629427 - NM_024675 PALB2 0 . . . 2.59 79.38 28 4.15 No 33 1.21 Yes 0 0 No -22 0.48 No 25 72.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68863106 + NM_004360 CDH1 0 . . . 5.56 81.37 47 7.83 Yes 7 0.75 No 0 0 No -34 0.42 No 51 77.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68869198 + NM_133509 RAD51B 0 . . . 5.5 75.64 24 5.47 No -4 1.5 Yes 0 0 No -40 0.37 No 44 38.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59868963 - NM_032043 BRIP1 0 . . . 3.85 74.78 23 3.96 No 72 0.18 No 0 0 No -57 0.76 Yes 43 70.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68618384 + NM_133509 RAD51B 0 . . . 3.86 73.59 15 5.19 No 59 0.75 No 0 0 No -14 0.32 No 44 81.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47651716 + NM_000251 MSH2 0 . . . 2.7 77.24 23 5 No 33 0.13 No 0 0 No -22 0.51 No 42 54.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89732245 + NM_000314 PTEN 0 . . . 3.78 66.74 21 4.19 No -2 0.65 No 0 0 No -20 0.71 Yes 48 33.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215617784 - NM_000465 BARD1 0 . . . 6.48 79.96 22 4.56 No 22 0.88 Yes 0 0 No -21 0.78 Yes 36 70.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68771702 + NM_133509 RAD51B 0 . . . 8.74 77.44 37 7.14 Yes 4 1.48 Yes 0 0 No -26 0.25 No 46 46.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6042761 - NM_000535 PMS2 0 . . . 3.6 85.02 26 4.25 No 4 1.2 Yes 0 0 No -28 0.91 Yes 54 65.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68342839 + NM_133509 RAD51B 0 . . . 1.86 70.85 20 4.14 No 64 -3.67 No 0 0 No -17 0.42 No 45 61.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56786949 + NM_058216 RAD51C 0 . . . 1.2 0 10 4 No 34 0.57 No 0 0 No -34 0.83 Yes 42 55.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68585775 + NM_133509 RAD51B 0 . . . 7.05 84.81 23 5.2 No 59 1.46 Yes 0 0 No -22 0.8 Yes 42 90.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94167669 - NM_005591 MRE11 0 . . . 6.44 83.6 18 4.19 No 11 0.89 Yes 0 0 No -21 0.8 Yes 47 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68819207 + NM_133509 RAD51B 0 . . . 2.72 77.49 18 3.56 No 54 2.15 Yes 0 0 No -21 0.44 No 42 81.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215672679 - NM_000465 BARD1 0 . . . 9.6 84.09 110 7.17 Yes 12 0.04 No 0 0 No -28 0.5 No 41 79.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23640565 - NM_024675 PALB2 0 . . . 4.34 75.65 29 5.82 Yes 36 1.02 Yes 0 0 No -28 0.62 No 14 61.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89663513 + NM_000314 PTEN 0 . . . 0.78 0 29 5.48 No 54 -0.95 No 0 0 No -28 0.9 Yes 36 58.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68815317 + NM_004360 CDH1 0 . . . 2.3 57.91 29 5.66 Yes 32 1.45 Yes 0 0 No -28 0.68 Yes 50 39.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68950830 + NM_133509 RAD51B 0 . . . 3.04 63.73 29 6.57 Yes 70 0.66 No 0 0 No -28 0.73 Yes 39 51.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41248585 - NM_007294 BRCA1 0 . . . 2.11 84.41 21 4.29 No 18 1.47 Yes 0 0 No -20 0.57 No 40 96.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190702946 + NM_000534 PMS1 0 . . . 7.53 80.42 37 5.23 No 68 -4.13 No 0 0 No -29 0.53 No 46 86.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68693382 + NM_133509 RAD51B 0 . . . 2.82 75.92 28 6.57 Yes 50 1.22 Yes 0 0 No -25 0.5 No 52 30.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94154754 - NM_005591 MRE11 0 . . . 5.76 90.1 13 4.36 No 23 0.77 Yes 0 0 No -62 0.42 No 40 43.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59889771 - NM_032043 BRIP1 0 . . . 9.79 83.95 15 4.74 No 37 -1.47 No 0 0 No -29 0.63 No 39 55.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68480671 + NM_133509 RAD51B 0 . . . 4.04 75.62 24 4.43 No 5 -2.55 No 0 0 No -27 0.65 No 36 58.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59872587 - NM_032043 BRIP1 0 . . . 0.95 73.41 31 5.83 Yes -4 0.58 No 0 0 No -30 0.56 No 37 56.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68331042 + NM_133509 RAD51B 0 . . . 4.92 62.96 15 4.3 No 47 0.97 Yes 0 0 No -15 0.42 No 34 50.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45800349 - NM_001048171 MUTYH 0 . . . 0.72 0 35 6.08 Yes 38 1.61 Yes 0 0 No -30 0.5 No 48 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59939836 - NM_032043 BRIP1 0 . . . 6.94 80.27 49 8.1 Yes 5 0.73 No 0 0 No -14 0.39 No 48 60.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68910688 + NM_133509 RAD51B 0 . . . 4.48 76.69 20 4.9 No 67 -3.32 No 0 0 No -19 0.73 Yes 45 68.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190663247 + NM_000534 PMS1 0 . . . 0.02 0 18 5.85 Yes 15 0.82 Yes 0 0 No -39 0.46 No 43 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29104546 - NM_001005735 CHEK2 0 . . . 1.1 67.86 27 5.17 No 12 0.73 No 0 0 No -26 0.91 Yes 36 45.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59814216 - NM_032043 BRIP1 0 . . . 2.92 80.74 21 5 No 9 0.77 Yes 0 0 No -20 0.51 No 49 94.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68716439 + NM_133509 RAD51B 0 . . . 5.06 82.02 21 4.98 No 70 1.71 Yes 0 0 No -21 0.67 Yes 46 46.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68418227 + NM_133509 RAD51B 0 . . . 0.03 0 31 5.15 No 37 0.72 No 0 0 No -23 0.55 No 44 64.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94210962 - NM_005591 MRE11 0 . . . 7.45 77.63 15 4.29 No 51 0.79 Yes 0 0 No -25 0.37 No 51 35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94203007 - NM_005591 MRE11 0 . . . 3.88 74.59 44 6.62 Yes 14 2.4 Yes 0 0 No -44 0.39 No 44 93.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68596807 + NM_133509 RAD51B 0 . . . 0.87 0 18 5.74 Yes 67 0.82 Yes 0 0 No -17 0.54 No 54 65.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59771316 - NM_032043 BRIP1 0 . . . 3.76 73.53 18 4.33 No 70 -5.55 No 0 0 No -23 0.75 Yes 44 56.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68542701 + NM_133509 RAD51B 0 . . . 4.33 75.21 37 5.47 No 2 1.13 Yes 0 0 No -28 0.31 No 52 68.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68518357 + NM_133509 RAD51B 0 . . . 4.86 88.55 16 4.69 No 36 1.24 Yes 0 0 No -21 0.59 No 22 75.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68503234 + NM_133509 RAD51B 0 . . . 3.56 71.41 29 5.57 Yes 3 0.1 No 0 0 No -28 0.82 Yes 50 94.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68490139 + NM_133509 RAD51B 0 . . . 6.5 86.2 14 4.8 No 9 1.58 Yes 0 0 No -29 0.78 Yes 49 85.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6031302 - NM_000535 PMS2 0 . . . 3.25 80.12 38 6.27 Yes 61 1.89 Yes 0 0 No -37 0.66 Yes 50 87.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94159569 - NM_005591 MRE11 0 . . . 0.9 78.96 14 4.9 No 8 0.7 No 0 0 No -23 0.32 No 39 91.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59871641 - NM_032043 BRIP1 0 . . . 6.59 78.44 49 6.57 Yes 43 1.51 Yes 0 0 No -38 0.36 No 43 68.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59772966 - NM_032043 BRIP1 0 . . . 1.95 65.15 29 7.74 Yes -3 0.13 No 0 0 No -37 0.44 No 55 26.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68601249 + NM_133509 RAD51B 0 . . . 3.41 0 19 4.64 No 32 0.69 No 0 0 No -29 0.65 No 53 54.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104174402 - NM_001100119 XRCC3 0 . . . 5.1 83.6 30 5.84 Yes 61 -2.17 No 0 0 No -30 0.5 No 41 62.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152354788 - NM_005431 XRCC2 0 . . . 4.89 70.8 21 5.19 No 20 0.64 No 0 0 No -20 0.63 No 38 51.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89714348 + NM_000314 PTEN 0 . . . 7.35 80.47 90 9.43 Yes 10 0.91 Yes 0 0 No -25 0.59 No 44 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68539668 + NM_133509 RAD51B 0 . . . 6.57 77.56 9 3.87 No 32 0.27 No 0 0 No -30 0.72 Yes 50 61.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68602295 + NM_133509 RAD51B 0 . . . 0.38 67.19 18 5.31 No 29 0.81 Yes 0 0 No -22 0.75 Yes 38 94.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69129306 + NM_133509 RAD51B 0 . . . 3.23 75.13 22 5.29 No 61 1.7 Yes 0 0 No -21 0.81 Yes 57 62.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68630700 + NM_133509 RAD51B 0 . . . 1.58 81.12 32 5.55 No 13 0.48 No 0 0 No -29 0.53 No 45 51.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33446436 - NM_002878 RAD51D 0 . . . 8.62 75.14 44 6.78 Yes NA NA NA 0 0 No -24 0.75 Yes 46 83.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32953345 + NM_000059 BRCA2 0 . . . 1.27 66.4 14 4.47 No 2 0.46 No 0 0 No -33 0.76 Yes 47 59.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33427373 - NM_002878 RAD51D 0 . . . 6.44 80.78 45 7.46 Yes 0 0.86 Yes 0 0 No -32 0.58 No 49 74.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23626401 - NM_024675 PALB2 0 . . . 0.42 74.68 21 5.83 Yes 53 0.63 No 0 0 No -20 0.62 No 36 61.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59814056 - NM_032043 BRIP1 0 . . . 4.8 60.97 35 6.08 Yes -2 0.42 No 0 0 No -34 0.79 Yes 47 37.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1205380 + NM_000455 STK11 0 . . . 9.13 88.3 28 5.19 No 50 1.53 Yes 0 0 No -27 0.74 Yes 47 58.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108210480 + NM_000051 ATM 0 . . . 8.48 79.95 15 4.28 No 8 0.72 No 0 0 No -48 0.8 Yes 42 47.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190680395 + NM_000534 PMS1 0 . . . 3.75 88.34 19 4.24 No 55 0.67 No 0 0 No -32 0.67 Yes 33 56.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94160537 - NM_005591 MRE11 0 . . . 1.04 0 12 6.46 Yes 17 -1.19 No 0 0 No -32 0.51 No 41 68.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68415400 + NM_133509 RAD51B 0 . . . 0.92 79.83 25 5.6 Yes 4 0.23 No 0 0 No -24 0.76 Yes 54 70.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68647761 + NM_133509 RAD51B 0 . . . 1.2 64.02 24 6.16 Yes 9 1.23 Yes 0 0 No -23 0.77 Yes 49 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89639984 + NM_000314 PTEN 0 . . . 6.01 80.67 32 6.94 Yes 38 -2.27 No 0 0 No -21 0.49 No 45 95.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59754852 - NM_032043 BRIP1 0 . . . 3.94 76.09 32 4.79 No 18 -0.17 No 0 0 No -24 0.65 No 43 37.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68302738 + NM_133509 RAD51B 0 . . . 10.5 83.15 34 6.97 Yes 12 0.56 No 0 0 No -33 0.79 Yes 41 61.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84380570 - NM_139076 FAM175A 0 . . . 2.01 68.88 18 5.73 Yes 72 0.94 Yes 0 0 No -22 0.64 No 46 56.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48023980 + NM_000179 MSH6 0 . . . 1.75 63.48 17 5.29 No 47 0.59 No 0 0 No -25 0.62 No 42 58.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59924985 - NM_032043 BRIP1 0 . . . 3.45 68.13 28 6.07 Yes 32 0.7 No 0 0 No -24 0.76 Yes 50 50.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84387673 - NM_139076 FAM175A 0 . . . 0.75 66.18 19 5 No 22 -2.06 No 0 0 No -18 0.57 No 52 46.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215619179 - NM_000465 BARD1 0 . . . 2.27 67 28 6.53 Yes 54 0.18 No 0 0 No -27 0.66 No 43 82.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69016394 + NM_133509 RAD51B 0 . . . 3.5 68.34 19 5.57 Yes 21 1.71 Yes 0 0 No -24 0.44 No 37 73.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90984316 - NM_002485 NBN 0 . . . 4.99 79.1 27 5.53 No 15 1.18 Yes 0 0 No -34 0.5 No 43 94.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190718822 + NM_000534 PMS1 0 . . . 3.52 84.34 100 10.72 Yes -1 1.39 Yes 0 0 No -30 0.18 No 48 66.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108135968 + NM_000051 ATM 0 . . . 0.86 66.91 15 5.47 No 52 -4.46 No 0 0 No -60 0.16 No 40 38.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32913479 + NM_000059 BRCA2 0 . . . 2.5 81.01 32 4.76 No 64 -4.46 No 0 0 No -31 0.45 No 48 85.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68678994 + NM_133509 RAD51B 0 . . . 4.76 70.23 31 5.41 No 65 -5.88 No 0 0 No -30 0.82 Yes 47 84.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41001893 + NM_001164269 RAD51 0 . . . 2.33 0 49 7.07 Yes 71 0.8 Yes 0 0 No -43 0.58 No 43 70.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68303445 + NM_133509 RAD51B 0 . . . 1.99 65.45 27 5.74 Yes 13 0.72 No 0 0 No -26 0.82 Yes 45 80.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68942323 + NM_133509 RAD51B 0 . . . 0.96 76.47 19 6.16 Yes 8 0.11 No 0 0 No -31 0.66 No 46 88.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68705394 + NM_133509 RAD51B 0 . . . 2.07 69.72 16 5.39 No 15 2.39 Yes 0 0 No -23 0.85 Yes 43 87.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68332135 + NM_133509 RAD51B 0 . . . 3.32 82.74 12 4.26 No 4 1.07 Yes 0 0 No -51 0.54 No 54 56.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68465849 + NM_133509 RAD51B 0 . . . 8.8 95.01 27 5.2 No 4 0.53 No 0 0 No -56 0.68 Yes 39 55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59925321 - NM_032043 BRIP1 0 . . . 0.6 68.72 40 6.71 Yes 64 0.34 No 0 0 No -38 0.75 Yes 44 25.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68751957 + NM_133509 RAD51B 0 . . . 2.81 75.59 26 5.04 No -1 0.9 Yes 0 0 No -25 0.7 Yes 55 36.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29094835 - NM_001005735 CHEK2 0 . . . 3.64 70.88 17 6.93 Yes 50 -3.83 No 0 0 No -27 0.36 No 49 88.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131909861 + NM_005732 RAD50 0 . . . 5.16 83.96 34 6.14 Yes 22 0.33 No 0 0 No -33 0.51 No 36 63.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108208046 + NM_000051 ATM 0 . . . 1.26 59.5 14 5.29 No -3 0.63 No 0 0 No -29 0.62 No 34 30.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47702271 + NM_000251 MSH2 0 . . . 2.07 68.24 16 4.35 No 27 0.78 Yes 0 0 No -27 0.57 No 44 39.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68787552 + NM_133509 RAD51B 0 . . . 0.96 65.75 16 4.31 No 68 0.1 No 0 0 No -19 0.39 No 45 65.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21967442 - NM_000077 CDKN2A 0 . . . 6.17 90.56 27 5.2 No 18 -0.55 No 0 0 No -26 0.83 Yes 45 50.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47769980 + NM_000251 MSH2 0 . . . 2.1 65.55 22 5.73 Yes 10 1.29 Yes 0 0 No -21 0.72 Yes 48 89.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1203953 + NM_000455 STK11 0 . . . 4.52 85.75 17 6.6 Yes 6 0.11 No 0 0 No -35 0.5 No 52 94.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108172819 + NM_000051 ATM 0 . . . 3.83 67.79 17 4.25 No 67 0.26 No 0 0 No -19 0.41 No 52 22.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68970984 + NM_133509 RAD51B 0 . . . 4.87 72.12 23 5.39 No -2 0.39 No 0 0 No -25 0.65 No 56 34.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94181524 - NM_005591 MRE11 0 . . . 0.27 72.63 33 5.83 Yes 3 2.14 Yes 0 0 No -21 0.54 No 55 80.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68902028 + NM_133509 RAD51B 0 . . . 6.35 75.77 13 5 No 52 0.23 No 0 0 No -20 0.45 No 36 60.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56803552 + NM_058216 RAD51C 0 . . . 2.03 0 35 5.58 Yes 63 1.14 Yes 0 0 No -28 0.58 No 51 42.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105176841 + NM_021930 RINT1 0 . . . 6.96 82.31 17 4.22 No 58 1.16 Yes 0 0 No -27 0.78 Yes 49 62.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59771016 - NM_032043 BRIP1 0 . . . 5.17 67.22 26 4.35 No 20 0.05 No 0 0 No -25 0.94 Yes 42 86.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59865837 - NM_032043 BRIP1 0 . . . 8.69 74.82 38 5.44 No 54 1.66 Yes 0 0 No -34 0.36 No 49 68.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94217222 - NM_005591 MRE11 0 . . . 9.98 93.1 29 6.69 Yes 17 1.52 Yes 0 0 No -28 0.51 No 41 75.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32962938 + NM_000059 BRCA2 0 . . . 1.74 67.31 15 5.66 Yes 51 0.71 No 0 0 No -25 0.45 No 32 59.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69125678 + NM_133509 RAD51B 0 . . . 4.92 79.02 36 4.89 No 65 -4.82 No 0 0 No -32 0.43 No 44 69.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90989103 - NM_002485 NBN 0 . . . 3.72 73.45 23 5.91 Yes 58 0.63 No 0 0 No -22 0.73 Yes 33 71.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68817846 + NM_133509 RAD51B 0 . . . 1.3 70.05 24 5.48 No 51 -3.37 No 0 0 No -30 0.4 No 42 33.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32961745 + NM_000059 BRCA2 0 . . . 3.14 0 27 5.5 No 68 0.69 No 0 0 No -26 0.84 Yes 52 70.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41267600 - NM_007294 BRCA1 0 . . . 9.09 89.05 25 6.29 Yes 59 0.85 Yes 0 0 No -24 0.5 No 47 80.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68373260 + NM_133509 RAD51B 0 . . . 5.17 81.59 44 6.66 Yes 41 -3 No 0 0 No -43 0.57 No 49 50.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68737673 + NM_133509 RAD51B 0 . . . 2.94 77.09 22 5.25 No 62 1.06 Yes 0 0 No -24 0.48 No 39 65.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152352071 - NM_005431 XRCC2 0 . . . 7.32 84.79 16 3.87 No 3 0.71 No 0 0 No -24 0.4 No 42 60.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215672595 - NM_000465 BARD1 0 . . . 2.32 67.91 22 3.45 No 18 0.34 No 0 0 No -46 0.39 No 53 54.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215631195 - NM_000465 BARD1 0 . . . 6.64 85.09 56 7.36 Yes 6 0.18 No 0 0 No -23 0.58 No 48 70.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68670032 + NM_133509 RAD51B 0 . . . 7.14 83.48 36 5.56 Yes 8 0.43 No 0 0 No -36 0.52 No 43 51.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89624534 + NM_000314 PTEN 0 . . . 6.59 81.16 9 6.31 Yes 10 -0.56 No 0 0 No -34 0.56 No 49 51.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29138918 - NM_001005735 CHEK2 0 . . . 2.82 0 47 7.15 Yes 71 0.88 Yes 0 0 No -24 0.41 No 13 47.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68533164 + NM_133509 RAD51B 0 . . . 1.52 63.98 22 4.99 No 19 1.5 Yes 0 0 No -24 0.43 No 39 94.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68416882 + NM_133509 RAD51B 0 . . . 1.67 0 14 4.84 No 16 0.18 No 0 0 No -26 0.75 Yes 42 35.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68986328 + NM_133509 RAD51B 0 . . . 5.86 81.25 23 5.1 No 19 0.87 Yes 0 0 No -22 0.54 No 39 84.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108237056 + NM_000051 ATM 0 . . . 9.11 91.22 25 5.38 No 25 0.62 No 0 0 No -22 0.72 Yes 33 58.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68359488 + NM_133509 RAD51B 0 . . . 1.02 66.81 20 4.88 No 67 0.65 No 0 0 No -19 0.54 No 49 87.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94168394 - NM_005591 MRE11 0 . . . 5.83 74.92 28 5.38 No 31 0.88 Yes 0 0 No -20 0.64 No 40 78.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108153132 + NM_000051 ATM 0 . . . 0.59 81.26 26 5.41 No 31 0.11 No 0 0 No -25 0.66 Yes 26 38.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68528430 + NM_133509 RAD51B 0 . . . 3.22 76.23 16 5.2 No 39 0.62 No 0 0 No -57 0.31 No 48 87.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68915142 + NM_133509 RAD51B 0 . . . 1.03 72.37 22 7.24 Yes 13 0.63 No 0 0 No -21 0.74 Yes 45 87.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56804788 + NM_058216 RAD51C 0 . . . 3.93 63.32 27 5.74 Yes 53 1.48 Yes 0 0 No -20 0.6 No 49 29.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68792753 + NM_004360 CDH1 0 . . . 3.17 80.6 47 8.34 Yes 52 1.12 Yes 0 0 No -54 0.55 No 22 74.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56810775 + NM_058216 RAD51C 0 . . . 3.42 63.64 83 8.44 Yes 38 0.78 Yes 0 0 No -29 0.2 No 44 79.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1203986 + NM_000455 STK11 0 . . . 2.19 83.28 21 5.04 No 39 0.17 No 0 0 No -20 0.67 Yes 33 71.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84400362 - NM_139076 FAM175A 0 . . . 0.63 66.36 18 6.59 Yes 20 -1.88 No 0 0 No -28 0.82 Yes 19 61.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7578982 - NM_000546 TP53 0 . . . 0 72.15 40 6.61 Yes 21 1.07 Yes 0 0 No -39 0.32 No 37 64.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108161666 + NM_000051 ATM 0 . . . 2.79 68.75 15 5.39 No 57 -5.04 No 0 0 No -45 0.27 No 44 53.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131895796 + NM_005732 RAD50 0 . . . 5.99 82.65 19 5 No 51 -2.52 No 0 0 No -18 0.59 No 49 51.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69078226 + NM_133509 RAD51B 0 . . . 9.03 84.34 12 4.24 No 43 0.57 No 0 0 No -54 0.38 No 45 87.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108236178 + NM_000051 ATM 0 . . . 1.3 80.86 28 6.71 Yes -3 0.38 No 0 0 No -31 0.61 No 45 58.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47775846 + NM_000251 MSH2 0 . . . 2.59 82.37 17 6.75 Yes 57 0.56 No 0 0 No -29 0.69 Yes 51 63.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105195509 + NM_021930 RINT1 0 . . . 0.35 0 26 5.12 No 36 1.14 Yes 0 0 No -25 0.79 Yes 18 29.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37037615 + NM_000249 MLH1 0 . . . 1.4 75.14 46 5.49 No 61 1.53 Yes 0 0 No -31 0.38 No 51 83.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68754021 + NM_133509 RAD51B 0 . . . 8.77 93.4 22 5.74 Yes 18 0.22 No 0 0 No -57 0.29 No 47 82.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41226705 - NM_007294 BRCA1 0 . . . 2.63 77.24 16 5.08 No 70 2.11 Yes 0 0 No -19 0.87 Yes 46 57.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69045195 + NM_133509 RAD51B 0 . . . 0.3 67.83 15 5.66 Yes 20 0.47 No 0 0 No -26 0.57 No 38 64.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68604587 + NM_133509 RAD51B 0 . . . 3.25 80.6 19 4.77 No 33 2.06 Yes 0 0 No -25 0.69 Yes 49 69.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47722902 + NM_000251 MSH2 0 . . . 1.88 64.87 27 5.11 No 69 0.54 No 0 0 No -26 0.48 No 46 36.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47709657 + NM_000251 MSH2 0 . . . 1.99 72.69 10 4 No 67 1.56 Yes 0 0 No -33 0.79 Yes 51 55.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59933140 - NM_032043 BRIP1 0 . . . 7.7 75.8 53 7.34 Yes 72 1.1 Yes 0 0 No -31 0.36 No 45 70.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152342834 - NM_005431 XRCC2 0 . . . 1.5 64.8 30 5.74 Yes 70 0.78 Yes 0 0 No -29 0.78 Yes 58 21.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190730994 + NM_000534 PMS1 0 . . . 4.97 78 17 4.54 No 62 0.96 Yes 0 0 No -17 0.3 No 28 57.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1217126 + NM_000455 STK11 0 . . . 2.88 84.19 19 5.22 No 67 0.57 No 0 0 No -22 0.89 Yes 54 26.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131947489 + NM_005732 RAD50 0 . . . 4.84 84.33 24 4.85 No 19 0.6 No 0 0 No -24 0.6 No 46 28.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68808409 + NM_133509 RAD51B 0 . . . 7.52 79.19 25 4.93 No 51 -2.44 No 0 0 No -24 0.42 No 47 81.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68807892 + NM_133509 RAD51B 0 . . . 2.1 77.2 43 6.48 Yes 28 0.42 No 0 0 No -34 0.65 No 52 60.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68416940 + NM_133509 RAD51B 0 . . . 5.63 71.77 17 5.57 Yes 40 1.96 Yes 0 0 No -16 0.6 No 46 82.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68907510 + NM_133509 RAD51B 0 . . . 2.27 71.23 16 4.69 No 2 1.44 Yes 0 0 No -22 0.65 No 56 48.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68908373 + NM_133509 RAD51B 0 . . . 1.21 60.28 16 5.04 No 41 0.1 No 0 0 No -20 0.66 No 30 60.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538906 + NM_133509 RAD51B 0 . . . 9.47 84.77 28 5.74 Yes 75 -2.71 No 0 0 No -28 0.72 Yes 46 45.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90980460 - NM_002485 NBN 0 . . . 4.1 91.19 28 5.38 No 61 1.15 Yes 0 0 No -27 0.71 Yes 51 51.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68368252 + NM_133509 RAD51B 0 . . . 2.36 66.88 20 7.2 Yes 37 1.3 Yes 0 0 No -34 0.56 No 55 36.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68706453 + NM_133509 RAD51B 0 . . . 1.8 74.73 27 5.74 Yes 53 0.36 No 0 0 No -26 0.76 Yes 51 45.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59929606 - NM_032043 BRIP1 0 . . . 1.62 75.07 17 4.67 No 50 0.96 Yes 0 0 No -16 0.37 No 38 79.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47646413 + NM_000251 MSH2 0 . . . 1.84 75.09 37 6 Yes 31 1.13 Yes 0 0 No -36 0.55 No 43 51.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108192644 + NM_000051 ATM 0 . . . 0.38 58.78 27 6.69 Yes 39 0.08 No 0 0 No -26 0.78 Yes 54 36.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68932134 + NM_133509 RAD51B 0 . . . 3.31 80.88 45 4.82 No 41 2.07 Yes 0 0 No -21 0.51 No 17 73.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89636092 + NM_000314 PTEN 0 . . . 5.94 79.57 33 5.98 Yes 28 0.69 No 0 0 No -32 0.88 Yes 36 65.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47740954 + NM_000251 MSH2 0 . . . 7.86 89.39 20 4.9 No 9 1.06 Yes 0 0 No -22 0.73 Yes 49 85.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68356351 + NM_133509 RAD51B 0 . . . 1.01 76.31 22 5.29 No 47 0.81 Yes 0 0 No -21 0.69 Yes 47 43.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68844452 + NM_133509 RAD51B 0 . . . 0.36 63.52 27 4.12 No 55 -2.13 No 0 0 No -26 0.87 Yes 42 24.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7575110 - NM_000546 TP53 0 . . . 3.48 68.66 11 4.68 No 74 0.2 No 0 0 No -19 0.61 No 42 57.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68838613 + NM_004360 CDH1 0 . . . 1.08 0 29 6.47 Yes 15 0.83 Yes 0 0 No -28 0.45 No 43 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47633237 + NM_000251 MSH2 0 . . . 3.24 71.02 24 5.83 Yes 15 0.94 Yes 0 0 No -29 0.81 Yes 43 73.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215668911 - NM_000465 BARD1 0 . . . 5.58 82.15 29 6.24 Yes 8 0.7 No 0 0 No -28 0.92 Yes 42 91.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21996157 - NM_000077 CDKN2A 0 . . . 5.91 80.44 24 4.9 No 36 -2.44 No 0 0 No -23 0.53 No 40 32.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45802383 - NM_001048171 MUTYH 0 . . . 5.62 75.38 26 5.29 No 63 1.31 Yes 0 0 No -26 0.38 No 43 54.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108217798 + NM_000051 ATM 0 . . . 2.38 0 33 5.65 Yes 45 1.17 Yes 0 0 No -32 0.28 No 39 34.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75479225 - NM_001040108 MLH3 0 . . . 3.54 84.79 16 5.47 No 18 0.77 No 0 0 No -24 0.58 No 40 42.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45800406 - NM_001048171 MUTYH 0 . . . 7.3 88.47 27 5.57 Yes 30 1.7 Yes 0 0 No -24 0.72 Yes 49 97.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68521091 + NM_133509 RAD51B 0 . . . 5.23 83.4 14 3.76 No 6 1.37 Yes 0 0 No -27 0.84 Yes 42 63.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69018813 + NM_133509 RAD51B 0 . . . 5.51 68.06 20 4.9 No 15 0.09 No 0 0 No -19 0.37 No 42 61.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68763624 + NM_133509 RAD51B 0 . . . 4.88 62.33 34 6.81 Yes 46 0.21 No 0 0 No -33 0.57 No 48 63.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68793858 + NM_133509 RAD51B 0 . . . 5.26 70.62 23 4.86 No 62 -3.43 No 0 0 No -25 0.51 No 42 62.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108110725 + NM_000051 ATM 0 . . . 3.15 87.29 16 5.66 Yes 22 1.12 Yes 0 0 No -26 0.33 No 42 34.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108108678 + NM_000051 ATM 0 . . . 2 0 42 6.61 Yes 47 0.76 No 0 0 No -41 0.54 No 15 95.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69096387 + NM_133509 RAD51B 0 . . . 0.68 71.96 24 5.28 No 1 1.13 Yes 0 0 No -23 0.49 No 46 92.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47773126 + NM_000251 MSH2 0 . . . 10.16 88.87 78 8.42 Yes 66 1.08 Yes 0 0 No -31 0.49 No 48 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47714483 + NM_000251 MSH2 0 . . . 4.6 72.95 15 7.15 Yes 48 0.5 No 0 0 No -36 0.5 No 41 87.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104181845 - NM_001100119 XRCC3 0 . . . 5.51 70.94 30 5.83 Yes -2 0.5 No 0 0 No -29 0.94 Yes 42 76.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68606167 + NM_133509 RAD51B 0 . . . 1.07 0 46 6.73 Yes 20 0.15 No 0 0 No -31 0.75 Yes 37 46.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41002901 + NM_001164269 RAD51 0 . . . 5.48 75.13 22 6 Yes 43 1.06 Yes 0 0 No -21 0.62 No 43 73.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89711350 + NM_000314 PTEN 0 . . . 1.79 63.15 30 4.86 No 67 -1.73 No 0 0 No -32 0.43 No 47 94.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94185227 - NM_005591 MRE11 0 . . . 1.22 71.88 30 5.56 Yes 68 0.97 Yes 0 0 No -29 0.7 Yes 49 69.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32972535 + NM_000059 BRCA2 0 . . . 4.57 76.21 23 5.29 No 37 0.43 No 0 0 No -21 0.48 No 40 59.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68941415 + NM_133509 RAD51B 0 . . . 6.54 85.59 11 5.29 No 29 1.11 Yes 0 0 No -21 0.5 No 54 80 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21975652 - NM_000077 CDKN2A 0 . . . 6.76 87.51 17 4.8 No 64 1.8 Yes 0 0 No -21 0.89 Yes 50 65.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41206893 - NM_007294 BRCA1 0 . . . 0.12 0 33 5.27 No 58 0.63 No 0 0 No -25 0.55 No 58 40.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131895461 + NM_005732 RAD50 0 . . . 2.22 0 17 7.12 Yes 59 0.67 No 0 0 No -16 0.6 No 52 85.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69119168 + NM_133509 RAD51B 0 . . . 3.43 0 16 5.19 No 23 0.51 No 0 0 No -20 0.55 No 43 51.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47791932 + NM_000251 MSH2 0 . . . 8.65 84.42 15 3.8 No 12 1.22 Yes 0 0 No -54 0.55 No 46 61.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59767205 - NM_032043 BRIP1 0 . . . 7.54 87.11 33 4.74 No 8 1.25 Yes 0 0 No -25 0.71 Yes 50 93.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47652538 + NM_000251 MSH2 0 . . . 10.75 94.52 30 5.39 No 18 0.93 Yes 0 0 No -29 0.66 Yes 40 94.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68524868 + NM_133509 RAD51B 0 . . . 5.1 78.1 36 6.08 Yes 58 1.1 Yes 0 0 No -35 0.35 No 43 92.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89683616 + NM_000314 PTEN 0 . . . 6.88 79.18 36 5.83 Yes 28 1.26 Yes 0 0 No -25 0.59 No 30 80.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68374967 + NM_133509 RAD51B 0 . . . 1.85 80.45 17 4 No 70 -2.77 No 0 0 No -37 0.38 No 49 89.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108104545 + NM_000051 ATM 0 . . . 1.32 76.63 27 5.74 Yes 41 -3.43 No 0 0 No -26 0.78 Yes 47 81.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68334454 + NM_133509 RAD51B 0 . . . 1.36 73.76 22 6.32 Yes 65 0.39 No 0 0 No -21 0.89 Yes 55 35.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68403494 + NM_133509 RAD51B 0 . . . 2.48 70.27 16 4.95 No 31 1.82 Yes 0 0 No -20 0.75 Yes 27 86.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23644065 - NM_024675 PALB2 0 . . . 7.38 88.38 38 8.53 Yes 73 -3.71 No 0 0 No -37 0.54 No 47 94.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131973139 + NM_005732 RAD50 0 . . . 1.19 66.84 27 5.34 No 66 0.2 No 0 0 No -26 0.77 Yes 53 40.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89658306 + NM_000314 PTEN 0 . . . 2.86 74.81 33 6.08 Yes 67 1.68 Yes 0 0 No -22 0.58 No 35 97.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105194188 + NM_021930 RINT1 0 . . . 1.96 84.41 17 4.2 No 14 0.85 Yes 0 0 No -19 0.54 No 43 59.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94226577 - NM_005591 MRE11 0 . . . 5.78 73.89 15 4.58 No 11 0.1 No 0 0 No -23 0.31 No 47 46.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84400605 - NM_139076 FAM175A 0 . . . 3.04 0 19 5 No 31 1.14 Yes 0 0 No -30 0.47 No 46 83.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56786500 + NM_058216 RAD51C 0 . . . 2.86 84 16 5.1 No 2 1.5 Yes 0 0 No -16 0.56 No 21 76.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108129607 + NM_000051 ATM 0 . . . 2.37 67.99 27 6.03 Yes 39 0.21 No 0 0 No -26 0.88 Yes 47 61.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84392649 - NM_139076 FAM175A 0 . . . 3.35 70.25 19 5.66 Yes 17 0.24 No 0 0 No -27 0.42 No 41 90.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29121227 - NM_001005735 CHEK2 0 . . . 2.98 0 11 4.12 No 72 0.02 No 0 0 No -32 0.71 Yes 42 58.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68556632 + NM_133509 RAD51B 0 . . . 6.24 81.06 14 4.47 No 48 0.9 Yes 0 0 No -17 0.41 No 46 62.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37078047 + NM_000249 MLH1 0 . . . 2.7 66.69 21 6.85 Yes -4 0.59 No 0 0 No -20 0.77 Yes 50 69.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68618076 + NM_133509 RAD51B 0 . . . 1.75 78.87 12 5.56 Yes 72 0.77 No 0 0 No -28 0.6 No 43 52.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41221407 - NM_007294 BRCA1 0 . . . 0.99 67.2 15 4.58 No 64 1.42 Yes 0 0 No -21 0.24 No 37 82.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59941921 - NM_032043 BRIP1 0 . . . 2.58 72.14 16 6.24 Yes 7 1.14 Yes 0 0 No -21 0.73 Yes 41 78.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68783800 + NM_004360 CDH1 0 . . . 5.77 83.93 25 4.92 No 54 1.06 Yes 0 0 No -24 0.48 No 43 69.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108149443 + NM_000051 ATM 0 . . . 5.83 81.01 31 6.6 Yes 73 -3.95 No 0 0 No -30 0.55 No 47 50.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68577708 + NM_133509 RAD51B 0 . . . 2.11 0 48 9.81 Yes 37 1.39 Yes 0 0 No -30 0.53 No 52 43.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190721194 + NM_000534 PMS1 0 . . . 2.81 68.78 13 5.29 No 31 0.9 Yes 0 0 No -21 0.67 Yes 52 59.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47770799 + NM_000251 MSH2 0 . . . 5.62 82.09 51 7.12 Yes 34 -0.88 No 0 0 No -19 0.44 No 41 54.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47774921 + NM_000251 MSH2 0 . . . 1.83 79.69 19 4.37 No 34 -1.08 No 0 0 No -31 0.55 No 40 45.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94172680 - NM_005591 MRE11 0 . . . 1.18 61.99 21 6.98 Yes 62 0.96 Yes 0 0 No -27 0.68 Yes 42 58.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68804693 + NM_133509 RAD51B 0 . . . 7.09 84.42 10 4 No 32 1.21 Yes 0 0 No -20 0.65 No 38 80.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48013873 + NM_000179 MSH6 0 . . . 8.91 84.58 23 5.39 No 26 1.6 Yes 0 0 No -28 0.45 No 32 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84404571 - NM_139076 FAM175A 0 . . . 5.16 68.3 18 5.86 Yes 23 -3.89 No 0 0 No -24 0.56 No 42 39.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896663 - NM_032043 BRIP1 0 . . . 4.46 75.49 15 4.99 No 34 1.2 Yes 0 0 No -22 0.88 Yes 44 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68607584 + NM_133509 RAD51B 0 . . . 0.94 67.92 14 5.2 No 37 0.53 No 0 0 No -58 0.43 No 21 36.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68803764 + NM_004360 CDH1 0 . . . 3.53 82.35 21 5.2 No 6 1.25 Yes 0 0 No -25 0.67 Yes 52 69.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89659264 + NM_000314 PTEN 0 . . . 3.84 77.88 45 6.86 Yes 56 0.89 Yes 0 0 No -44 0.84 Yes 36 74.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215653251 - NM_000465 BARD1 0 . . . 2.9 73.52 33 6.08 Yes 37 0.55 No 0 0 No -32 0.34 No 43 50.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131927959 + NM_005732 RAD50 0 . . . 0.69 78.62 18 5.48 No 39 0.22 No 0 0 No -27 0.5 No 15 25.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69083345 + NM_133509 RAD51B 0 . . . 4.22 73.28 11 4.12 No 48 0.67 No 0 0 No -34 0.66 Yes 39 72.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59883327 - NM_032043 BRIP1 0 . . . 5.95 86.92 14 4.34 No 47 0.76 No 0 0 No -22 0.49 No 42 70.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32914217 + NM_000059 BRCA2 0 . . . 6.74 75.63 22 6.87 Yes -3 0.34 No 0 0 No -22 0.63 No 44 82.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32918596 + NM_000059 BRCA2 0 . . . 3.74 75.58 18 5.88 Yes 50 1.81 Yes 0 0 No -30 0.24 No 45 71.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68816642 + NM_133509 RAD51B 0 . . . 2.14 59.85 27 4.31 No 63 -4.63 No 0 0 No -27 0.74 Yes 56 42.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68557974 + NM_133509 RAD51B 0 . . . 1.75 0 9 3.87 No 51 -4.04 No 0 0 No -26 0.69 Yes 46 41.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69076267 + NM_133509 RAD51B 0 . . . 0.91 64.06 18 5.48 No 17 1.54 Yes 0 0 No -17 0.49 No 41 88.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190664661 + NM_000534 PMS1 0 . . . 6.4 79.92 23 7.35 Yes 12 1.74 Yes 0 0 No -47 0.76 Yes 46 75.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105208756 + NM_021930 RINT1 0 . . . 2.26 68.98 20 5.88 Yes 46 1.39 Yes 0 0 No -19 0.6 No 43 40.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215667921 - NM_000465 BARD1 0 . . . 2.24 0 18 5.87 Yes 70 0.13 No 0 0 No -23 0.33 No 46 45.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59938509 - NM_032043 BRIP1 0 . . . 6.71 88.18 40 6.54 Yes 71 0.32 No 0 0 No -26 0.77 Yes 40 30.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89649276 + NM_000314 PTEN 0 . . . 0.79 63.94 31 4.05 No 27 0.18 No 0 0 No -28 0.79 Yes 52 46.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33441046 - NM_002878 RAD51D 0 . . . 2.89 68.34 9 3.87 No 21 1.7 Yes 0 0 No -28 0.84 Yes 37 72.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190691382 + NM_000534 PMS1 0 . . . 5.81 83.37 19 4.61 No 12 1.03 Yes 0 0 No -26 0.46 No 46 81.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69013519 + NM_133509 RAD51B 0 . . . 0.17 0 19 4.46 No 56 -3.76 No 0 0 No -37 0.47 No 50 34.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32911777 + NM_000059 BRCA2 0 . . . 5.04 90.49 26 5.66 Yes 8 0.5 No 0 0 No -25 0.51 No 43 78.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89642101 + NM_000314 PTEN 0 . . . 2.51 60.94 44 7.62 Yes 41 0.17 No 0 0 No -43 0.73 Yes 49 42.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105197160 + NM_021930 RINT1 0 . . . 2.22 68.63 19 5.46 No 40 2.29 Yes 0 0 No -30 0.89 Yes 45 69.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21995245 - NM_000077 CDKN2A 0 . . . 2.41 76.62 21 5.78 Yes 40 -3.54 No 0 0 No -20 0.84 Yes 43 33.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59805061 - NM_032043 BRIP1 0 . . . 1.74 76.09 23 4.2 No 20 -1.84 No 0 0 No -22 0.6 No 51 50.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69130828 + NM_133509 RAD51B 0 . . . 5.5 82.92 31 5.28 No 64 0.3 No 0 0 No -26 0.76 Yes 45 81.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52436123 - NM_004656 BAP1 0 . . . 0.37 69.9 23 5.42 No -3 1.04 Yes 0 0 No -22 0.48 No 34 45.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47677362 + NM_000251 MSH2 0 . . . 2.59 68.89 31 5.63 Yes 76 0.99 Yes 0 0 No -25 0.77 Yes 48 44.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48014964 + NM_000179 MSH6 0 . . . 3.46 73.59 19 4.48 No 29 1.04 Yes 0 0 No -39 0.44 No 29 88.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68816585 + NM_133509 RAD51B 0 . . . 0.35 68.13 34 5.16 No 24 0.38 No 0 0 No -34 0.81 Yes 58 47.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152368784 - NM_005431 XRCC2 0 . . . 4.6 80.42 28 5.83 Yes 3 1.43 Yes 0 0 No -27 0.37 No 37 57.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190666900 + NM_000534 PMS1 0 . . . 2.31 0 9 5.2 No 61 0.89 Yes 0 0 No -30 0.82 Yes 47 51.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68902713 + NM_133509 RAD51B 0 . . . 6.18 73.6 11 4.12 No 34 0.4 No 0 0 No -28 0.78 Yes 44 87.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68464164 + NM_133509 RAD51B 0 . . . 4.14 73.05 24 5.05 No 5 0.94 Yes 0 0 No -23 0.94 Yes 53 71.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69129704 + NM_133509 RAD51B 0 . . . 1.58 77.84 39 5.69 Yes 47 0.66 No 0 0 No -27 0.51 No 54 43.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59876330 - NM_032043 BRIP1 0 . . . 5.79 87.6 34 6.84 Yes 4 0.13 No 0 0 No -34 0.75 Yes 34 85.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23617841 - NM_024675 PALB2 0 . . . 2 66.77 40 6.24 Yes -3 0.51 No 0 0 No -32 0.63 No 52 58.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68919317 + NM_133509 RAD51B 0 . . . 1.05 72.45 20 5.1 No -2 0.34 No 0 0 No -19 0.7 Yes 44 55.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41000471 + NM_001164269 RAD51 0 . . . 4.12 87.6 24 5.1 No 2 1.28 Yes 0 0 No -27 0.61 No 25 80.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89621954 + NM_000314 PTEN 0 . . . 3.65 78.91 22 5.29 No NA NA NA 0 0 No -21 0.54 No 41 34.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68905301 + NM_133509 RAD51B 0 . . . 5.3 79.17 21 5.2 No 7 0.28 No 0 0 No -23 0.92 Yes 44 59.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215593529 - NM_000465 BARD1 0 . . . 4.88 79.14 22 5.96 Yes 8 0.97 Yes 0 0 No -21 0.95 Yes 50 88.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75509869 - NM_001040108 MLH3 0 . . . 7.06 75.54 41 5.46 No 23 0.68 No 0 0 No -31 0.71 Yes 47 75.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68707404 + NM_133509 RAD51B 0 . . . 5.64 74.33 25 5.29 No 68 2.04 Yes 0 0 No -26 0.41 No 48 53.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68970154 + NM_133509 RAD51B 0 . . . 10.98 84.04 26 5.07 No 20 0.06 No 0 0 No -25 0.81 Yes 38 52.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68513146 + NM_133509 RAD51B 0 . . . 5.8 69.45 24 5.72 Yes 62 0.82 Yes 0 0 No -27 0.9 Yes 40 76.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104173179 - NM_001100119 XRCC3 0 . . . 3.63 0 30 5.48 No 13 1.61 Yes 0 0 No -30 0.35 No 39 84.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131916086 + NM_005732 RAD50 0 . . . 2.61 0 23 5.39 No -3 1.42 Yes 0 0 No -22 0.68 Yes 25 40.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89655602 + NM_000314 PTEN 0 . . . 1.53 67.76 15 5.2 No 65 0.34 No 0 0 No -59 0.64 No 31 89.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69077994 + NM_133509 RAD51B 0 . . . 5.58 74.42 32 6.38 Yes 19 1.42 Yes 0 0 No -26 0.62 No 39 83.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69025214 + NM_133509 RAD51B 0 . . . 4.86 83.84 17 7.45 Yes 57 0.27 No 0 0 No -20 0.32 No 49 62.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29086714 - NM_001005735 CHEK2 0 . . . 3.7 81.26 36 5.94 Yes 51 0.41 No 0 0 No -22 0.35 No 48 64.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215626838 - NM_000465 BARD1 0 . . . 0.67 60.6 32 5.91 Yes 50 0.2 No 0 0 No -31 0.87 Yes 35 49.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108148804 + NM_000051 ATM 0 . . . 0.1 51.5 14 4.47 No 51 1.4 Yes 0 0 No -37 0.59 No 47 34.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68831241 + NM_133509 RAD51B 0 . . . 1.09 74.21 20 5.56 Yes 33 -2.24 No 0 0 No -24 0.54 No 50 14.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56787417 + NM_058216 RAD51C 0 . . . 4.16 70.34 35 7.05 Yes -4 0.39 No 0 0 No -34 0.44 No 46 64.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68907566 + NM_133509 RAD51B 0 . . . 6.18 89.19 9 3.87 No 58 1.37 Yes 0 0 No -36 0.71 Yes 44 74.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41268129 - NM_007294 BRCA1 0 . . . 2.69 74.17 37 4.52 No 20 -2.81 No 0 0 No -24 0.84 Yes 47 67.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94162899 - NM_005591 MRE11 0 . . . 0.26 0 26 4.18 No 65 1.06 Yes 0 0 No -58 0.44 No 51 60.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84385227 - NM_139076 FAM175A 0 . . . 0.09 0 39 6.05 Yes 11 1.27 Yes 0 0 No -38 0.47 No 13 57.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7576183 - NM_000546 TP53 0 . . . 3.68 70.85 25 6.08 Yes 21 1.72 Yes 0 0 No -24 0.85 Yes 37 83.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68515694 + NM_133509 RAD51B 0 . . . 1.05 61.38 23 5.39 No 49 -4.57 No 0 0 No -22 0.41 No 47 43.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56779376 + NM_058216 RAD51C 0 . . . 1.79 84.41 21 5.2 No 21 2.42 Yes 0 0 No -37 0.76 Yes 37 94.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68792362 + NM_133509 RAD51B 0 . . . 8.37 81.44 25 5.39 No 61 0.99 Yes 0 0 No -22 0.81 Yes 27 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94158419 - NM_005591 MRE11 0 . . . 6.98 77.47 27 4.99 No 36 0.81 Yes 0 0 No -10 0.4 No 38 76.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94218336 - NM_005591 MRE11 0 . . . 2.91 68.95 17 5.66 Yes 16 1.11 Yes 0 0 No -16 0.49 No 42 93.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68844862 + NM_004360 CDH1 0 . . . 1.16 80.65 10 4 No 22 -0.97 No 0 0 No -37 0.68 Yes 51 37.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68307405 + NM_133509 RAD51B 0 . . . 1.68 0 38 6.15 Yes 55 0.62 No 0 0 No -28 0.56 No 49 71.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68394618 + NM_133509 RAD51B 0 . . . 4.95 66.53 19 5.48 No 70 -1.61 No 0 0 No -23 0.49 No 30 81.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29127241 - NM_001005735 CHEK2 0 . . . 8.41 78.5 40 6.3 Yes 25 0.82 Yes 0 0 No -21 0.68 Yes 40 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68807412 + NM_004360 CDH1 0 . . . 1.12 75.18 24 5.19 No 35 1.08 Yes 0 0 No -35 0.93 Yes 23 72.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59888632 - NM_032043 BRIP1 0 . . . 2.95 80.22 34 7.8 Yes 57 -3.81 No 0 0 No -33 0.81 Yes 43 68.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68957839 + NM_133509 RAD51B 0 . . . 0.52 69.37 35 10.17 Yes 3 0.65 No 0 0 No -34 0.64 No 26 67.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89701089 + NM_000314 PTEN 0 . . . 3.6 65.23 23 4.69 No 60 0.77 No 0 0 No -45 0.34 No 38 75.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48026057 + NM_000179 MSH6 0 . . . 4.25 75.68 19 4.32 No 67 -5.11 No 0 0 No -24 0.57 No 47 70.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56786845 + NM_058216 RAD51C 0 . . . 2.38 71.22 23 5.92 Yes 0 0.2 No 0 0 No -22 0.43 No 46 81.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131956961 + NM_005732 RAD50 0 . . . 1.52 90.38 27 5.53 No 52 1 Yes 0 0 No -26 0.76 Yes 51 68.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68415620 + NM_133509 RAD51B 0 . . . 3.08 77.77 12 3.59 No 58 -3.88 No 0 0 No -17 0.67 Yes 48 75.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68361195 + NM_133509 RAD51B 0 . . . 4.79 66.8 24 5.28 No 76 1.21 Yes 0 0 No -23 0.8 Yes 42 41.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84399833 - NM_139076 FAM175A 0 . . . 2.67 68.23 14 4.36 No 31 1.12 Yes 0 0 No -20 0.68 Yes 55 52.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68901363 + NM_133509 RAD51B 0 . . . 5.38 75.16 28 5.16 No 18 1.56 Yes 0 0 No -27 0.88 Yes 45 76.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68907097 + NM_133509 RAD51B 0 . . . 0.61 71.4 18 4.9 No 56 -2.35 No 0 0 No -22 0.17 No 49 54.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68448929 + NM_133509 RAD51B 0 . . . 0.12 83.82 20 4.91 No 37 1.57 Yes 0 0 No -19 0.54 No 26 50.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59923665 - NM_032043 BRIP1 0 . . . 2.54 70.89 18 4.31 No 42 -2.78 No 0 0 No -17 0.73 Yes 41 38.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23626536 - NM_024675 PALB2 0 . . . 0.97 74.68 19 4.24 No 72 -4.3 No 0 0 No -37 0.59 No 46 80.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59890002 - NM_032043 BRIP1 0 . . . 2.67 61.5 34 5.74 Yes 22 -3.23 No 0 0 No -33 0.79 Yes 37 45.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48034306 + NM_000179 MSH6 0 . . . 3.29 81.35 44 5.82 Yes 56 -2.76 No 0 0 No -10 0.31 No 43 76.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69107230 + NM_133509 RAD51B 0 . . . 0.66 0 16 5.56 Yes 8 0.12 No 0 0 No -32 0.51 No 20 85.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68835966 + NM_004360 CDH1 0 . . . 2.12 68.44 12 5.49 No -3 0.52 No 0 0 No -24 0.3 No 61 52.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75478989 - NM_001040108 MLH3 0 . . . 3.29 75.84 36 6.43 Yes 60 1.2 Yes 0 0 No -26 0.68 Yes 48 68.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105177415 + NM_021930 RINT1 0 . . . 1.73 66.84 15 3.81 No 12 0.9 Yes 0 0 No -50 0.7 Yes 42 62.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68904260 + NM_133509 RAD51B 0 . . . 7.75 84.33 32 4.34 No 8 1.39 Yes 0 0 No -31 0.61 No 50 75.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1226609 + NM_000455 STK11 0 . . . 1.04 77.61 23 5.15 No 53 -0.86 No 0 0 No -26 0.47 No 50 56.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32956203 + NM_000059 BRCA2 0 . . . 3.94 71.67 35 7.34 Yes 18 0.06 No 0 0 No -34 0.34 No 40 81.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90976184 - NM_002485 NBN 0 . . . 2.17 76.36 25 5.1 No 68 -5.05 No 0 0 No -24 0.58 No 44 82.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152352681 - NM_005431 XRCC2 0 . . . 5.73 69.43 40 6.26 Yes 15 0.9 Yes 0 0 No -34 0.5 No 38 55.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68842690 + NM_004360 CDH1 0 . . . 0.14 77.22 26 6.99 Yes 22 1.55 Yes 0 0 No -25 0.81 Yes 36 95.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84383604 - NM_139076 FAM175A 0 . . . 3.8 77.22 36 6.96 Yes 25 1.11 Yes 0 0 No -28 0.52 No 33 87.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32935484 + NM_000059 BRCA2 0 . . . 2.88 62.36 39 5.77 Yes 4 0.37 No 0 0 No -26 0.71 Yes 54 48.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69072595 + NM_133509 RAD51B 0 . . . 0.29 76.64 23 4.81 No 34 2.49 Yes 0 0 No -22 0.74 Yes 24 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69015881 + NM_133509 RAD51B 0 . . . 11.84 93.58 22 4.8 No 68 -2.41 No 0 0 No -21 0.95 Yes 47 86.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21976211 - NM_000077 CDKN2A 0 . . . 2.24 80.12 19 4.28 No 7 1.02 Yes 0 0 No -19 0.67 Yes 51 73.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41240427 - NM_007294 BRCA1 0 . . . 4.81 76.45 30 5.57 Yes 37 -3.68 No 0 0 No -29 0.69 Yes 38 75.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41202546 - NM_007294 BRCA1 0 . . . 0.81 65.88 19 3.74 No 16 1.09 Yes 0 0 No -23 0.54 No 42 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68868685 + NM_133509 RAD51B 0 . . . 5.1 82.13 20 3.67 No 17 1.18 Yes 0 0 No -31 0.56 No 41 77.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68984349 + NM_133509 RAD51B 0 . . . 6.6 79.26 31 5.74 Yes 4 0.25 No 0 0 No -26 0.52 No 39 78.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190689857 + NM_000534 PMS1 0 . . . 8.7 87.71 32 5.96 Yes 23 0.27 No 0 0 No -31 0.57 No 46 80.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84397398 - NM_139076 FAM175A 0 . . . 7.9 81.56 33 6.24 Yes 3 1.34 Yes 0 0 No -22 0.61 No 40 62.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68865228 + NM_004360 CDH1 0 . . . 7.67 87.6 29 5.9 Yes 17 1.1 Yes 0 0 No -28 0.67 Yes 41 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32902497 + NM_000059 BRCA2 0 . . . 3.55 78.68 27 5.68 Yes 33 0.91 Yes 0 0 No -46 0.77 Yes 25 74.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47724070 + NM_000251 MSH2 0 . . . 8.98 82.72 19 4.47 No 13 0.76 No 0 0 No -39 0.64 No 45 72.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47689323 + NM_000251 MSH2 0 . . . 0.64 0 29 5.36 No 45 0.68 No 0 0 No -28 0.51 No 13 56.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1217550 + NM_000455 STK11 0 . . . 6.98 81.45 35 5.92 Yes 62 -2.17 No 0 0 No -31 0.61 No 23 57.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68871414 + NM_004360 CDH1 0 . . . 6.19 86.98 24 7.06 Yes 9 0.59 No 0 0 No -23 0.85 Yes 49 95.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68608093 + NM_133509 RAD51B 0 . . . 5.36 86.58 22 5.74 Yes 6 0.75 No 0 0 No -27 0.53 No 48 80.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68386458 + NM_133509 RAD51B 0 . . . 7.99 80.12 26 4.99 No 6 1.06 Yes 0 0 No -25 0.69 Yes 25 60.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90955973 - NM_002485 NBN 0 . . . 4.29 70.16 15 4 No -4 -1.45 No 0 0 No -14 0.64 No 51 47.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108166742 + NM_000051 ATM 0 . . . 4.8 82.99 27 8.63 Yes 28 1.03 Yes 0 0 No -31 0.41 No 48 58.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108113056 + NM_000051 ATM 0 . . . 2.34 70.33 25 4.9 No -4 0.19 No 0 0 No -24 0.47 No 50 68.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190731654 + NM_000534 PMS1 0 . . . 6.56 0 14 4.47 No 36 0.72 No 0 0 No -38 0.81 Yes 28 51.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885628 - NM_032043 BRIP1 0 . . . 5.08 75.64 61 6.87 Yes 62 0.68 No 0 0 No -27 0.53 No 47 63.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47719828 + NM_000251 MSH2 0 . . . 2.05 0 29 6.81 Yes 9 0.85 Yes 0 0 No -28 0.41 No 37 71.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69020327 + NM_133509 RAD51B 0 . . . 1.69 74.49 28 4.43 No 14 0.24 No 0 0 No -22 0.24 No 44 77.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68894162 + NM_133509 RAD51B 0 . . . 1.61 64.53 27 4.91 No 68 -3.79 No 0 0 No -26 0.77 Yes 56 39.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37057464 + NM_000249 MLH1 0 . . . 1.37 76.95 33 6.57 Yes 61 -1.81 No 0 0 No -32 0.62 No 49 32.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69103922 + NM_133509 RAD51B 0 . . . 1.36 0 32 6 Yes 10 0.84 Yes 0 0 No -26 0.6 No 43 56.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23613985 - NM_024675 PALB2 0 . . . 1.36 0 28 5.38 No 37 1.12 Yes 0 0 No -27 0.58 No 35 40.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47753285 + NM_000251 MSH2 0 . . . 0.32 74.68 18 4.24 No 11 0.75 No 0 0 No -41 0.85 Yes 47 72.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48012704 + NM_000179 MSH6 0 . . . 2.53 76.54 19 4.52 No 62 -4.85 No 0 0 No -27 0.33 No 43 77.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68426548 + NM_133509 RAD51B 0 . . . 3.17 69.06 22 4.69 No 21 0.34 No 0 0 No -21 0.63 No 46 62.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37079227 + NM_000249 MLH1 0 . . . 3.84 82.88 30 6.4 Yes 52 1 Yes 0 0 No -29 0.93 Yes 49 85.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68572764 + NM_133509 RAD51B 0 . . . 1.95 73.86 55 7.2 Yes 1 0.66 No 0 0 No -32 0.34 No 45 65.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69049815 + NM_133509 RAD51B 0 . . . 2.81 72.04 38 7.35 Yes 56 -5.51 No 0 0 No -37 0.71 Yes 48 51.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68481782 + NM_133509 RAD51B 0 . . . 5.56 75.73 28 5.29 No 37 1.22 Yes 0 0 No -27 0.56 No 49 57.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68806355 + NM_133509 RAD51B 0 . . . 5.15 79.58 29 3.69 No 36 1.19 Yes 0 0 No -23 0.62 No 34 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21975077 - NM_000077 CDKN2A 0 . . . 1.23 73.29 22 3.68 No NA NA NA 21 0.69 Yes -21 0.9 Yes 53 19.37 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr5 131923666 + NM_005732 RAD50 0 . . . 2.61 69.67 19 4.77 No 65 0.61 No 0 0 No -27 0.92 Yes 46 57.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68642573 + NM_133509 RAD51B 0 . . . 3.98 84.69 11 2.93 No 8 1.2 Yes 0 0 No -22 0.4 No 50 90.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29131041 - NM_001005735 CHEK2 0 . . . 2.48 74.46 9 3.87 No 29 0.27 No 0 0 No -34 0.84 Yes 34 70.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89670999 + NM_000314 PTEN 0 . . . 4.01 80.77 27 5.2 No 70 -3.65 No 0 0 No -26 0.8 Yes 42 66.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190652971 + NM_000534 PMS1 0 . . . 0 86.16 20 7.14 Yes 74 0.78 Yes 0 0 No -19 0.73 Yes 23 48.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69052144 + NM_133509 RAD51B 0 . . . 6.43 84.34 31 5.99 Yes 15 0.14 No 0 0 No -30 0.88 Yes 43 96.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37037338 + NM_000249 MLH1 0 . . . 3.01 0 17 3.7 No 26 1.39 Yes 0 0 No -20 0.57 No 28 79.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152354015 - NM_005431 XRCC2 0 . . . 6.95 77.69 20 4.58 No 74 0.68 No 0 0 No -59 0.6 No 48 64.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68429257 + NM_133509 RAD51B 0 . . . 3.26 77.31 27 5.96 Yes 73 -6.16 No 0 0 No -26 0.91 Yes 48 88.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68587705 + NM_133509 RAD51B 0 . . . 6.58 76.38 22 2.94 No 16 0.77 No 0 0 No -42 0.72 Yes 49 71.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68548105 + NM_133509 RAD51B 0 . . . 5.81 0 17 4.97 No 58 0.48 No 0 0 No -24 0.28 No 48 60.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47730904 + NM_000251 MSH2 0 . . . 10.63 91.19 19 4.69 No 6 2.57 Yes 0 0 No -46 0.88 Yes 52 86.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68806801 + NM_004360 CDH1 0 . . . 3 76.34 26 4.46 No 8 0.62 No 0 0 No -25 0.92 Yes 39 55.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68377227 + NM_133509 RAD51B 0 . . . 4.76 60.97 13 4.36 No 40 0.78 Yes 0 0 No -30 0.64 No 52 54.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215666071 - NM_000465 BARD1 0 . . . 4.55 76.01 34 6.24 Yes 23 1.13 Yes 0 0 No -36 0.42 No 45 54.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21983179 - NM_000077 CDKN2A 0 . . . 0.39 0 19 5.82 Yes 74 1.23 Yes 0 0 No -29 0.79 Yes 53 62.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29102595 - NM_001005735 CHEK2 0 . . . 4.33 84.06 23 5.28 No 35 0.57 No 0 0 No -26 0.61 No 52 55.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68500534 + NM_133509 RAD51B 0 . . . 1.9 76.01 25 3.95 No 47 1.01 Yes 0 0 No -24 0.31 No 50 41.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94173426 - NM_005591 MRE11 0 . . . 1.16 65.83 17 6.08 Yes 66 1.4 Yes 0 0 No -16 0.78 Yes 58 41.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68425984 + NM_133509 RAD51B 0 . . . 0.03 84.41 23 4.74 No 21 1.14 Yes 0 0 No -36 0.21 No 37 62.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68769551 + NM_133509 RAD51B 0 . . . 0.96 73.08 25 4.98 No 10 1.38 Yes 0 0 No -18 0.26 No 48 95.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68355075 + NM_133509 RAD51B 0 . . . 0.89 66.66 39 6.55 Yes 40 -4.03 No 0 0 No -25 0.78 Yes 48 50.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7571352 - NM_000546 TP53 0 . . . 4.12 81.02 13 5.1 No 18 0.37 No 0 0 No -27 0.78 Yes 47 61.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69087619 + NM_133509 RAD51B 0 . . . 3.28 79.62 27 6.78 Yes 24 -2.1 No 0 0 No -26 0.92 Yes 45 41.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29124188 - NM_001005735 CHEK2 0 . . . 9.54 92.12 40 7.06 Yes 35 1.07 Yes 0 0 No -39 0.86 Yes 38 84.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68837178 + NM_004360 CDH1 0 . . . 3.01 76.21 19 5 No 41 0.96 Yes 0 0 No -18 0.59 No 17 46.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59823095 - NM_032043 BRIP1 0 . . . 3.07 68.73 17 5.57 Yes 14 0.58 No 0 0 No -16 0.79 Yes 44 79.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215606509 - NM_000465 BARD1 0 . . . 0.06 60 35 6.15 Yes 53 0.76 No 0 0 No -34 0.53 No 45 85.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47646223 + NM_000251 MSH2 0 . . . 1.44 82.12 29 5.74 Yes 26 0.54 No 0 0 No -26 0.69 Yes 44 66.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89679403 + NM_000314 PTEN 0 . . . 4.8 71.09 20 5.58 Yes 2 1.55 Yes 0 0 No -27 0.87 Yes 40 94.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94200691 - NM_005591 MRE11 0 . . . 6.41 91.63 21 4.9 No 0 1.28 Yes 0 0 No -20 0.72 Yes 41 51.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89711014 + NM_000314 PTEN 0 . . . 11.66 87.2 28 5.66 Yes 19 1.02 Yes 0 0 No -27 0.83 Yes 48 62.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69008251 + NM_133509 RAD51B 0 . . . 4.83 71.82 34 7.59 Yes 22 0.23 No 0 0 No -33 0.73 Yes 36 86.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190691536 + NM_000534 PMS1 0 . . . 5.52 74.82 30 6.66 Yes 69 0.94 Yes 0 0 No -29 0.91 Yes 41 62.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68326749 + NM_133509 RAD51B 0 . . . 1.26 75.98 22 4.8 No 34 1.2 Yes 0 0 No -20 0.8 Yes 24 54.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68664329 + NM_133509 RAD51B 0 . . . 6.6 80.36 22 5.74 Yes 71 -4.34 No 0 0 No -21 0.83 Yes 46 63.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29094504 - NM_001005735 CHEK2 0 . . . 1.08 0 48 5.84 Yes 25 0.34 No 0 0 No -33 0.91 Yes 37 56.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52444345 - NM_004656 BAP1 0 . . . 10.85 80.63 38 6.92 Yes NA NA NA 0 0 No -37 0.92 Yes 19 59.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94161305 - NM_005591 MRE11 0 . . . 1.54 68.87 21 4.63 No 73 1.03 Yes 0 0 No -27 0.49 No 50 54.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68563032 + NM_133509 RAD51B 0 . . . 4.51 84.95 17 5.11 No 32 0.11 No 0 0 No -22 0.51 No 47 50.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56780025 + NM_058216 RAD51C 0 . . . 0.51 78.88 39 6.66 Yes 67 -4.87 No 0 0 No -22 0.55 No 47 43.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59892651 - NM_032043 BRIP1 0 . . . 4.38 73.03 26 4.55 No 74 1.31 Yes 0 0 No -25 0.78 Yes 43 73.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48008895 + NM_000179 MSH6 0 . . . 6.87 65.03 21 5.58 Yes 25 1.82 Yes 0 0 No -20 0.66 No 33 89.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90961762 - NM_002485 NBN 0 . . . 1.16 0 18 5.27 No 16 1.34 Yes 0 0 No -20 0.31 No 42 86.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59877350 - NM_032043 BRIP1 0 . . . 1.42 62.82 26 5 No 0 0.27 No 0 0 No -25 0.92 Yes 43 52.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104171371 - NM_001100119 XRCC3 0 . . . 1.87 65.83 19 5.92 Yes 32 2.16 Yes 0 0 No -56 0.3 No 49 70.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68451987 + NM_133509 RAD51B 0 . . . 0.4 60.84 31 6 Yes 68 1.21 Yes 0 0 No -30 0.91 Yes 43 48.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68421030 + NM_133509 RAD51B 0 . . . 6.27 80.43 29 6.09 Yes 34 0.94 Yes 0 0 No -19 0.38 No 41 71.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47652112 + NM_000251 MSH2 0 . . . 9.26 89.85 16 5.64 Yes 26 0.33 No 0 0 No -27 0.69 Yes 47 52.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94210531 - NM_005591 MRE11 0 . . . 7.21 82.84 21 5.09 No 16 1.6 Yes 0 0 No -20 0.73 Yes 33 43.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68292269 + NM_133509 RAD51B 0 . . . 3.54 80.53 20 6.42 Yes 47 -3.9 No 0 0 No -19 0.74 Yes 45 62.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47644584 + NM_000251 MSH2 0 . . . 1.94 69.66 50 8.22 Yes 59 0.36 No 0 0 No -49 0.72 Yes 55 68.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47762693 + NM_000251 MSH2 0 . . . 2.67 76.54 16 5.15 No 48 1.08 Yes 0 0 No -20 0.58 No 10 23.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108171252 + NM_000051 ATM 0 . . . 5.62 83.6 16 5.04 No 58 0.49 No 0 0 No -20 0.54 No 48 78.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6010157 - NM_000535 PMS2 0 . . . 3.64 76.53 35 8.12 Yes 2 1.03 Yes 0 0 No -34 0.46 No 56 43.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47674418 + NM_000251 MSH2 0 . . . 3.27 68.95 19 5 No 16 1.73 Yes 0 0 No -18 0.47 No 42 86.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68418596 + NM_133509 RAD51B 0 . . . 5.21 70.78 17 4.8 No 5 1.08 Yes 0 0 No -24 0.41 No 25 40.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21979787 - NM_000077 CDKN2A 0 . . . 2.35 76.69 22 5.58 Yes 3 0.85 Yes 0 0 No -21 0.67 Yes 19 72.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47803794 + NM_000251 MSH2 0 . . . 6.11 76.56 24 4.61 No 44 0.65 No 0 0 No -22 0.43 No 51 65.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47764514 + NM_000251 MSH2 0 . . . 5.44 84.17 17 4.69 No 37 0.95 Yes 0 0 No -57 0.52 No 21 79.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131950915 + NM_005732 RAD50 0 . . . 5.17 86.28 22 5.74 Yes 28 1.22 Yes 0 0 No -21 0.85 Yes 44 61.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108190078 + NM_000051 ATM 0 . . . 0.19 0 36 7.39 Yes 56 0.72 No 0 0 No -35 0.33 No 35 61.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68817877 + NM_133509 RAD51B 0 . . . 0.42 72.96 25 3.84 No 41 -3.31 No 0 0 No -24 0.73 Yes 47 29.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89638496 + NM_000314 PTEN 0 . . . 3.66 68.78 28 5.38 No 31 0.54 No 0 0 No -27 0.64 No 45 44.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108117353 + NM_000051 ATM 0 . . . 7.15 89.86 23 4.39 No 3 0.9 Yes 0 0 No -22 0.75 Yes 43 36.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37034076 + NM_000249 MLH1 0 . . . 2.61 58.92 19 4.98 No 11 0.02 No 0 0 No -26 0.47 No 47 38.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68950440 + NM_133509 RAD51B 0 . . . 7.79 90.9 50 6.13 Yes 74 0.37 No 0 0 No -41 0.68 Yes 47 26.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68306884 + NM_133509 RAD51B 0 . . . 0.67 76.83 10 4 No 36 0.71 No 0 0 No -33 0.41 No 22 78.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47636361 + NM_000251 MSH2 0 . . . 0.61 80.12 29 5.39 No 71 -4.48 No 0 0 No -60 0.59 No 49 52.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59826330 - NM_032043 BRIP1 0 . . . 3.25 80.12 22 5.29 No 8 1.2 Yes 0 0 No -21 0.31 No 50 89.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105209565 + NM_021930 RINT1 0 . . . 3.77 79.61 78 8.07 Yes 49 1.25 Yes 0 0 No -20 0.35 No 43 72.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41018796 + NM_001164269 RAD51 0 . . . 5.25 86.86 18 4.9 No 16 1.16 Yes 0 0 No -26 0.61 No 42 78.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108155610 + NM_000051 ATM 0 . . . 8.57 76.85 19 5 No 54 1.15 Yes 0 0 No -26 0.72 Yes 21 41.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68380396 + NM_133509 RAD51B 0 . . . 0.76 66.58 23 6.16 Yes 59 1.01 Yes 0 0 No -22 0.87 Yes 34 56.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68603744 + NM_133509 RAD51B 0 . . . 0.32 74.68 12 4.24 No 4 0.1 No 0 0 No -28 0.63 No 54 64.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68792729 + NM_004360 CDH1 0 . . . 2.49 84.41 34 6.66 Yes 28 1.12 Yes 0 0 No -33 0.71 Yes 41 66.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47684296 + NM_000251 MSH2 0 . . . 4.35 72.74 23 6.55 Yes 18 1.81 Yes 0 0 No -22 0.55 No 40 93.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84401770 - NM_139076 FAM175A 0 . . . 0.45 69.05 13 4.36 No 8 0.13 No 0 0 No -27 0.64 No 41 63.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190736876 + NM_000534 PMS1 0 . . . 2.51 65.27 21 6.1 Yes -4 0.35 No 0 0 No -20 0.91 Yes 13 63.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75487904 - NM_001040108 MLH3 0 . . . 7.09 0 14 4.9 No 2 0.69 No 0 0 No -19 0.56 No 49 66.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47664999 + NM_000251 MSH2 0 . . . 6.75 74.24 17 4.81 No 9 0.94 Yes 0 0 No -27 0.55 No 49 84.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56782622 + NM_058216 RAD51C 0 . . . 8.95 87.69 19 5 No 26 1.13 Yes 0 0 No -18 0.71 Yes 46 82.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59820218 - NM_032043 BRIP1 0 . . . 0.26 0 39 6.27 Yes 68 0.89 Yes 0 0 No -21 0.67 Yes 39 78.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68842388 + NM_133509 RAD51B 0 . . . 2.37 0 28 5.36 No 70 1.48 Yes 0 0 No -27 0.91 Yes 54 91.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32967631 + NM_000059 BRCA2 0 . . . 3.48 76.34 57 7.56 Yes 16 1.14 Yes 0 0 No -27 0.68 Yes 34 66.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94198141 - NM_005591 MRE11 0 . . . 0.09 65.53 26 5.35 No 72 -5.48 No 0 0 No -25 0.57 No 34 31.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69098851 + NM_133509 RAD51B 0 . . . 3.03 76.72 24 5.11 No 23 0.52 No 0 0 No -28 0.81 Yes 39 60.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69031316 + NM_133509 RAD51B 0 . . . 2.01 75.7 24 5.47 No 36 0.49 No 0 0 No -23 0.83 Yes 51 75.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41205959 - NM_007294 BRCA1 0 . . . 7.15 91.29 29 6.47 Yes 45 0.24 No 0 0 No -31 0.64 No 20 52.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47749461 + NM_000251 MSH2 0 . . . 0.6 0 22 5.29 No 53 0.05 No 0 0 No -21 0.52 No 52 68.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90989023 - NM_002485 NBN 0 . . . 0.02 0 25 5.63 Yes 55 -4.91 No 0 0 No -24 0.87 Yes 56 57.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41230543 - NM_007294 BRCA1 0 . . . 2.12 75.47 12 4.9 No 4 1.22 Yes 0 0 No -40 0.74 Yes 47 75.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68721480 + NM_133509 RAD51B 0 . . . 0.2 80.89 47 6.52 Yes 55 0.62 No 0 0 No -36 0.47 No 25 67.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68477305 + NM_133509 RAD51B 0 . . . 0.64 74.46 28 5.56 Yes 33 0.91 Yes 0 0 No -27 0.78 Yes 43 91.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56768402 + NM_058216 RAD51C 0 . . . 5.96 86.23 20 6.08 Yes 10 1.2 Yes 0 0 No -23 0.46 No 48 94.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94208853 - NM_005591 MRE11 0 . . . 4.15 0 30 4.34 No 75 0.37 No 0 0 No -30 0.48 No 48 81.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29109150 - NM_001005735 CHEK2 0 . . . 3.05 68.88 17 5.64 Yes 17 0.87 Yes 0 0 No -16 0.46 No 41 53.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47704535 + NM_000251 MSH2 0 . . . 0.91 66.97 19 4.45 No 48 0.71 No 0 0 No -29 0.49 No 45 57.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69022552 + NM_133509 RAD51B 0 . . . 4.21 71.6 21 5.19 No -4 0.95 Yes 0 0 No -20 0.59 No 41 43.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89733233 + NM_000314 PTEN 0 . . . 1.17 78.81 25 4.95 No 42 2.02 Yes 0 0 No -24 0.78 Yes 16 37.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68729355 + NM_133509 RAD51B 0 . . . 1.91 64.93 21 5.65 Yes 66 2 Yes 0 0 No -20 0.51 No 31 63.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89680315 + NM_000314 PTEN 0 . . . 0.27 70.69 35 6.24 Yes 4 0.08 No 0 0 No -34 0.76 Yes 54 65.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59938996 - NM_032043 BRIP1 0 . . . 6.33 78 30 5.55 No 21 0.97 Yes 0 0 No -29 0.89 Yes 37 93.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59921200 - NM_032043 BRIP1 0 . . . 0.63 80.35 25 5.39 No 29 0.42 No 0 0 No -22 0.67 Yes 49 75.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33432163 - NM_002878 RAD51D 0 . . . 1.83 62.66 30 5.38 No 63 1.26 Yes 0 0 No -60 0.5 No 47 67.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21982891 - NM_000077 CDKN2A 0 . . . 3.72 76.39 27 4.66 No 14 0.75 No 0 0 No -26 0.9 Yes 37 76.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94152945 - NM_005591 MRE11 0 . . . 4.93 74.03 36 6.48 Yes 6 0.76 No 0 0 No -37 0.61 No 42 91.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108179529 + NM_000051 ATM 0 . . . 5.53 82.93 17 5.83 Yes 10 0.62 No 0 0 No -26 0.66 No 47 60.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89663266 + NM_000314 PTEN 0 . . . 3.12 72.79 22 4.32 No 63 0.36 No 0 0 No -21 0.77 Yes 48 83.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1222763 + NM_000455 STK11 0 . . . 0.75 71.89 20 5 No 7 -0.36 No 0 0 No -43 0.56 No 18 31.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59903894 - NM_032043 BRIP1 0 . . . 6.8 70.58 19 4.99 No 39 1.11 Yes 0 0 No -18 0.4 No 40 88.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131937219 + NM_005732 RAD50 0 . . . 0.79 65.86 31 3.3 No 18 0.4 No 0 0 No -33 0.6 No 29 85.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47716944 + NM_000251 MSH2 0 . . . 3.85 69.68 15 4.58 No 35 1.68 Yes 0 0 No -17 0.43 No 39 66.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75506987 - NM_001040108 MLH3 0 . . . 6.67 83.82 20 6.27 Yes 6 1.12 Yes 0 0 No -19 0.62 No 52 85.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89717411 + NM_000314 PTEN 0 . . . 4.67 82.78 19 4.01 No 22 0.98 Yes 0 0 No -18 0.51 No 51 56.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21974387 - NM_000077 CDKN2A 0 . . . 2.12 82.01 67 8.31 Yes 12 -1.4 No 0 0 No -26 0.61 No 48 62.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89669323 + NM_000314 PTEN 0 . . . 0.06 0 37 7.81 Yes 23 0.63 No 0 0 No -25 0.52 No 41 44.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47649117 + NM_000251 MSH2 0 . . . 1.2 0 12 3.76 No 0 0.19 No 0 0 No -35 0.92 Yes 55 45.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56809724 + NM_058216 RAD51C 0 . . . 9.82 84.77 17 5.17 No 15 0.81 Yes 0 0 No -26 0.76 Yes 43 79.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68745994 + NM_133509 RAD51B 0 . . . 7.84 72.9 24 4.9 No 28 0.75 No 0 0 No -40 0.82 Yes 44 30.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32907524 + NM_000059 BRCA2 0 . . . 5.99 73.78 19 5 No 21 0.03 No 0 0 No -18 0.54 No 48 95.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68491646 + NM_133509 RAD51B 0 . . . 8.63 92.32 17 4.24 No 61 -1.92 No 0 0 No -25 0.66 Yes 52 69.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108108319 + NM_000051 ATM 0 . . . 4.99 62.93 21 4.41 No 12 0.3 No 0 0 No -20 0.87 Yes 46 85.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105179991 + NM_021930 RINT1 0 . . . 3.28 80.12 27 5.87 Yes 6 1.13 Yes 0 0 No -26 0.87 Yes 52 82.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105206943 + NM_021930 RINT1 0 . . . 3.46 85.84 22 4.46 No 42 -2.33 No 0 0 No -36 0.31 No 47 57.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190706434 + NM_000534 PMS1 0 . . . 11.3 84.7 21 4.28 No 47 -0.76 No 0 0 No -21 0.41 No 43 89.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68867123 + NM_004360 CDH1 0 . . . 2.76 70.91 35 6.4 Yes 45 1.04 Yes 0 0 No -34 0.7 Yes 45 89.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68817190 + NM_133509 RAD51B 0 . . . 3.26 80.8 52 7.04 Yes 60 -4.16 No 0 0 No -25 0.67 Yes 43 70.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23631957 - NM_024675 PALB2 0 . . . 4.76 72.01 53 7.99 Yes 37 0.63 No 0 0 No -47 0.87 Yes 46 52.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68327881 + NM_133509 RAD51B 0 . . . 0.94 73.73 38 5.95 Yes 66 -4.83 No 0 0 No -23 0.53 No 50 56.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23635751 - NM_024675 PALB2 0 . . . 5.68 83.12 19 5 No 37 0.72 No 0 0 No -18 0.47 No 52 34.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89666418 + NM_000314 PTEN 0 . . . 8.98 73.79 27 6.4 Yes 61 -3.75 No 0 0 No -26 0.85 Yes 42 74.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69029470 + NM_133509 RAD51B 0 . . . 7.71 81.2 23 5.39 No 51 1.17 Yes 0 0 No -22 0.7 Yes 45 82.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68302132 + NM_133509 RAD51B 0 . . . 5.33 68.31 19 5.47 No 8 0.57 No 0 0 No -29 0.45 No 50 81.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56805660 + NM_058216 RAD51C 0 . . . 11.52 86.93 28 5.48 No 55 0.33 No 0 0 No -23 0.8 Yes 33 79.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190732221 + NM_000534 PMS1 0 . . . 8.66 84.54 16 4.69 No 21 0.73 No 0 0 No -20 0.51 No 42 88.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21986264 - NM_000077 CDKN2A 0 . . . 3.87 70.36 33 7.78 Yes 13 0.35 No 0 0 No -25 0.53 No 34 46.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41267961 - NM_007294 BRCA1 0 . . . 6.3 81.3 22 4.9 No 22 0.33 No 0 0 No -22 0.66 No 45 62.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896924 - NM_032043 BRIP1 0 . . . 2.31 70.17 13 5.36 No 23 1.54 Yes 0 0 No -23 0.6 No 35 69.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33427602 - NM_002878 RAD51D 0 . . . 4.12 0 16 4.58 No 20 0.63 No 0 0 No -19 0.64 No 38 85.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47761630 + NM_000251 MSH2 0 . . . 6.57 91.99 13 5.08 No 6 1.39 Yes 0 0 No -25 0.61 No 52 82.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94169754 - NM_005591 MRE11 0 . . . 3.86 73.99 25 5.29 No 72 0.84 Yes 0 0 No -24 0.62 No 50 80.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56805260 + NM_058216 RAD51C 0 . . . 2.5 89.67 26 6.63 Yes 45 -3.67 No 0 0 No -25 0.82 Yes 47 60.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41020689 + NM_001164269 RAD51 0 . . . 2.75 74.03 31 7.94 Yes 48 0.41 No 0 0 No -30 0.92 Yes 47 18.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94183202 - NM_005591 MRE11 0 . . . 6.97 89.1 16 6.26 Yes 62 0.95 Yes 0 0 No -24 0.56 No 46 60.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94199984 - NM_005591 MRE11 0 . . . 0.78 75.9 21 5.86 Yes -2 -1.7 No 0 0 No -20 0.44 No 45 83.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47665430 + NM_000251 MSH2 0 . . . 8.6 84.66 31 7.59 Yes 58 0.97 Yes 0 0 No -30 0.87 Yes 40 94.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152359614 - NM_005431 XRCC2 0 . . . 8.07 72.47 25 5.39 No 10 1.17 Yes 0 0 No -22 0.76 Yes 48 74.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90974218 - NM_002485 NBN 0 . . . 3.51 74.87 21 5.2 No 41 0.39 No 0 0 No -20 0.63 No 42 64.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69074216 + NM_133509 RAD51B 0 . . . 4.91 80.94 36 5.15 No 74 -0.52 No 0 0 No -20 0.48 No 52 60.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68368997 + NM_133509 RAD51B 0 . . . 1.02 68.62 23 4.77 No 18 0.47 No 0 0 No -22 0.87 Yes 46 79.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21979628 - NM_000077 CDKN2A 0 . . . 3.96 76.82 45 6.99 Yes 39 2.12 Yes 0 0 No -44 0.65 No 54 36.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59772922 - NM_032043 BRIP1 0 . . . 4.59 72.86 34 5.91 Yes 41 0.2 No 0 0 No -34 0.39 No 47 54.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69112834 + NM_133509 RAD51B 0 . . . 6.34 85.78 21 5.02 No 30 -3.91 No 0 0 No -45 0.44 No 50 49.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68751994 + NM_133509 RAD51B 0 . . . 5.2 84.95 51 7.55 Yes -1 0.82 Yes 0 0 No -31 0.58 No 44 70.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108118828 + NM_000051 ATM 0 . . . 1.21 72.35 47 6.7 Yes 0 0.83 Yes 0 0 No -43 0.71 Yes 52 70.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68634329 + NM_133509 RAD51B 0 . . . 7.14 85.76 33 6.03 Yes 25 1.12 Yes 0 0 No -32 0.87 Yes 50 86.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68502255 + NM_133509 RAD51B 0 . . . 1.82 0 20 5.5 No 55 0.69 No 0 0 No -46 0.36 No 26 85.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59786818 - NM_032043 BRIP1 0 . . . 0.76 0 58 8.77 Yes 40 1.15 Yes 0 0 No -57 0.66 No 18 73.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68428651 + NM_133509 RAD51B 0 . . . 4.7 75.39 21 4.8 No 15 -2.07 No 0 0 No -20 0.93 Yes 45 82.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131907179 + NM_005732 RAD50 0 . . . 0.63 77.05 20 5.1 No 23 -1.98 No 0 0 No -19 0.74 Yes 43 69.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21990007 - NM_000077 CDKN2A 0 . . . 5.58 79.65 33 5.76 Yes 16 -0.68 No 0 0 No -30 0.7 Yes 48 63.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131914705 + NM_005732 RAD50 0 . . . 7.88 81.03 18 3.78 No 50 1.15 Yes 0 0 No -27 0.54 No 35 63.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69067262 + NM_133509 RAD51B 0 . . . 2.81 78.06 23 5 No 67 -5.45 No 0 0 No -23 0.51 No 52 40.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68396582 + NM_133509 RAD51B 0 . . . 0.9 0 13 4.36 No 69 2.32 Yes 0 0 No -20 0.38 No 37 37.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59824256 - NM_032043 BRIP1 0 . . . 2.65 82.78 29 6.08 Yes 64 0.72 No 0 0 No -28 0.94 Yes 34 42.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47701504 + NM_000251 MSH2 0 . . . 2.21 72.42 32 7.6 Yes 48 0.89 Yes 0 0 No -31 0.57 No 27 63.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105191691 + NM_021930 RINT1 0 . . . 2.65 67.64 20 4.69 No NA NA NA 0 0 No -19 0.61 No 38 58.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190671242 + NM_000534 PMS1 0 . . . 1.51 80.65 27 5.2 No 3 0.81 Yes 0 0 No -55 0.67 Yes 50 81.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68761536 + NM_133509 RAD51B 0 . . . 5.39 79.84 40 6.4 Yes 8 0.07 No 0 0 No -32 0.45 No 50 71.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41005207 + NM_001164269 RAD51 0 . . . 1.4 0 35 6.71 Yes 20 0.26 No 0 0 No -30 0.35 No 38 41.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190742459 + NM_000534 PMS1 0 . . . 6.69 86.5 16 3.67 No 65 -2.99 No 0 0 No -36 0.52 No 52 94.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105198822 + NM_021930 RINT1 0 . . . 5.22 74.99 53 8.76 Yes 24 0.69 No 0 0 No -39 0.62 No 34 89.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68446432 + NM_133509 RAD51B 0 . . . 3.64 74.99 42 8.8 Yes -1 0.63 No 0 0 No -41 0.64 No 41 73.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68923674 + NM_133509 RAD51B 0 . . . 3.67 84 32 6.57 Yes 2 1.5 Yes 0 0 No -31 0.84 Yes 44 8.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32915381 + NM_000059 BRCA2 0 . . . 2.46 75.8 29 5.92 Yes 33 0.75 No 0 0 No -28 0.88 Yes 32 83.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68644257 + NM_133509 RAD51B 0 . . . 11.19 88.23 21 6.85 Yes 5 0.67 No 0 0 No -20 0.89 Yes 43 74.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90973685 - NM_002485 NBN 0 . . . 4.43 82.43 16 4.68 No 47 1.06 Yes 0 0 No -36 0.49 No 48 70.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48027916 + NM_000179 MSH6 0 . . . 2.88 78.5 14 4.24 No 72 -3.01 No 0 0 No -37 0.55 No 50 44.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45796673 - NM_001048171 MUTYH 0 . . . 1.39 65.88 26 5.99 Yes 16 0.99 Yes 0 0 No -25 0.91 Yes 42 76.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68571345 + NM_133509 RAD51B 0 . . . 0.98 77.47 23 6.24 Yes 70 1.35 Yes 0 0 No -26 0.48 No 45 73.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41274041 - NM_007294 BRCA1 0 . . . 1.37 71.64 27 4.47 No 49 -3.6 No 0 0 No -27 0.5 No 43 93.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47684660 + NM_000251 MSH2 0 . . . 2.94 68.42 17 4.96 No 76 -3.89 No 0 0 No -29 0.81 Yes 52 60.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68706476 + NM_133509 RAD51B 0 . . . 3.95 70.17 28 5.38 No 76 0.36 No 0 0 No -53 0.6 No 45 69.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68684265 + NM_133509 RAD51B 0 . . . 5 85.39 17 5.21 No 17 1.24 Yes 0 0 No -21 0.45 No 41 69.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89682863 + NM_000314 PTEN 0 . . . 4.96 79.22 21 6.29 Yes 59 1.03 Yes 0 0 No -28 0.54 No 41 72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68791312 + NM_004360 CDH1 0 . . . 1.29 63.29 23 4.69 No 16 0.7 No 0 0 No -28 0.3 No 42 82.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190683726 + NM_000534 PMS1 0 . . . 3.87 76.79 35 6.34 Yes 51 0.57 No 0 0 No -34 0.63 No 53 49.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131973049 + NM_005732 RAD50 0 . . . 3.08 67.01 9 3.87 No 39 0.82 Yes 0 0 No -25 0.6 No 41 74.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105190059 + NM_021930 RINT1 0 . . . 2.41 68.34 29 5.4 No 23 1.59 Yes 0 0 No -28 0.78 Yes 45 59.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108177200 + NM_000051 ATM 0 . . . 3.97 82.07 21 5.04 No 49 -3.53 No 0 0 No -20 0.62 No 45 63.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41221257 - NM_007294 BRCA1 0 . . . 6.66 75.13 16 5.66 Yes -3 1.11 Yes 0 0 No -21 0.51 No 46 74.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68391949 + NM_133509 RAD51B 0 . . . 0.17 0 32 6.05 Yes 13 -1.13 No 0 0 No -26 0.51 No 45 63.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89660141 + NM_000314 PTEN 0 . . . 2.65 53.9 14 4.86 No 33 0.04 No 0 0 No -34 0.67 Yes 34 55.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33446925 - NM_002878 RAD51D 0 . . . 10.26 74.12 23 5.09 No 70 -2.9 No 26 0.78 Yes -22 0.76 Yes 43 55.41 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr15 40990192 + NM_001164269 RAD51 0 . . . 2.31 71.88 26 6.16 Yes 52 0.39 No 0 0 No -31 0.71 Yes 42 47.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68541070 + NM_133509 RAD51B 0 . . . 3.75 64.95 35 6.01 Yes 42 1.13 Yes 0 0 No -34 0.72 Yes 38 84.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94182930 - NM_005591 MRE11 0 . . . 1.88 78.16 57 6.07 Yes 1 0.27 No 0 0 No -28 0.63 No 51 63.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68474169 + NM_133509 RAD51B 0 . . . 3.55 86.11 19 5.39 No 73 1.18 Yes 0 0 No -27 0.71 Yes 39 51.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68797965 + NM_133509 RAD51B 0 . . . 1.74 67.1 15 4.58 No 61 1.03 Yes 0 0 No -19 0.47 No 36 44.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89659400 + NM_000314 PTEN 0 . . . 0.61 66.68 19 5 No 27 1.18 Yes 0 0 No -18 0.63 No 31 96.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56782021 + NM_058216 RAD51C 0 . . . 2.94 73.55 21 5.35 No 51 2.51 Yes 0 0 No -23 0.46 No 40 54.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23630474 - NM_024675 PALB2 0 . . . 8.17 78.84 22 5.1 No 1 1.44 Yes 0 0 No -21 0.7 Yes 40 88.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37033070 + NM_000249 MLH1 0 . . . 6.24 68.82 12 5.29 No 20 0.8 Yes 0 0 No -52 0.44 No 48 55.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75507232 - NM_001040108 MLH3 0 . . . 2.01 75.98 19 4.74 No 2 0.8 Yes 0 0 No -18 0.59 No 30 41.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131909706 + NM_005732 RAD50 0 . . . 3.08 0 67 7.76 Yes 8 0.07 No 0 0 No -25 0.45 No 50 83.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68347983 + NM_133509 RAD51B 0 . . . 2.8 74.4 24 5.48 No 13 0.98 Yes 0 0 No -23 0.91 Yes 51 64.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215597738 - NM_000465 BARD1 0 . . . 4.14 86.67 25 5.25 No 4 0.25 No 0 0 No -24 0.74 Yes 46 62.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108137356 + NM_000051 ATM 0 . . . 0.48 63.81 20 4.41 No -2 0.4 No 0 0 No -27 0.58 No 33 57.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68924542 + NM_133509 RAD51B 0 . . . 2.61 81.83 21 4.58 No 49 1.5 Yes 0 0 No -20 0.84 Yes 9 57.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68378957 + NM_133509 RAD51B 0 . . . 7.29 72.2 26 5 No 12 0.8 Yes 0 0 No -25 0.87 Yes 36 82.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68839820 + NM_004360 CDH1 0 . . . 1.18 74.4 13 4.36 No 75 0.77 Yes 0 0 No -37 0.78 Yes 53 18.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29122027 - NM_001005735 CHEK2 0 . . . 6.74 83.82 45 6.37 Yes 5 1.09 Yes 0 0 No -44 0.65 No 53 81.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89671267 + NM_000314 PTEN 0 . . . 4.38 74.94 18 4.13 No 50 0.35 No 0 0 No -21 0.54 No 48 65.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215641478 - NM_000465 BARD1 0 . . . 3.79 78.27 43 6.31 Yes 29 0.91 Yes 0 0 No -37 0.55 No 42 94.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6012740 - NM_000535 PMS2 0 . . . 2.11 74.78 16 3.98 No 4 0.08 No 0 0 No -27 0.74 Yes 54 84.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7581902 - NM_000546 TP53 0 . . . 0.59 74.68 31 5.72 Yes 22 -2.69 No 0 0 No -30 0.73 Yes 37 89.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108219448 + NM_000051 ATM 0 . . . 3.06 79.29 33 5.85 Yes 65 0.29 No 0 0 No -32 0.85 Yes 47 75.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69018426 + NM_133509 RAD51B 0 . . . 1.16 73.57 18 4.44 No 49 1.53 Yes 0 0 No -29 0.3 No 48 86.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68557305 + NM_133509 RAD51B 0 . . . 8.67 87.67 28 5.53 No 13 1.05 Yes 0 0 No -27 0.73 Yes 45 77.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108217766 + NM_000051 ATM 0 . . . 3.44 70.43 22 5.28 No 13 1.18 Yes 0 0 No -39 0.47 No 45 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68898419 + NM_133509 RAD51B 0 . . . 2.22 65.97 26 6.65 Yes 6 1 Yes 0 0 No -25 0.46 No 39 74.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68715436 + NM_133509 RAD51B 0 . . . 5.82 96.95 20 4.54 No 61 -3.07 No 0 0 No -19 0.68 Yes 46 51.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6037860 - NM_000535 PMS2 0 . . . 6.36 79.37 22 6.16 Yes 37 0.63 No 0 0 No -21 0.89 Yes 38 43.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68864576 + NM_004360 CDH1 0 . . . 4.09 88.79 19 3.71 No 63 -0.72 No 0 0 No -31 0.81 Yes 47 76.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56799877 + NM_058216 RAD51C 0 . . . 4.56 70.45 20 4.76 No 5 1.19 Yes 0 0 No -19 0.77 Yes 53 55.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215613945 - NM_000465 BARD1 0 . . . 9.3 92.71 18 4.24 No 54 1.73 Yes 0 0 No -17 0.7 Yes 48 61.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68566167 + NM_133509 RAD51B 0 . . . 3.39 90.88 14 4.36 No 59 1.35 Yes 0 0 No -19 0.26 No 39 36.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215628586 - NM_000465 BARD1 0 . . . 6.47 80.65 16 4.57 No 39 0.39 No 0 0 No -20 0.61 No 42 85.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190733947 + NM_000534 PMS1 0 . . . 3.33 86.41 19 4.8 No 37 1.18 Yes 0 0 No -18 0.34 No 25 76.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215632895 - NM_000465 BARD1 0 . . . 7.4 88.32 12 4.1 No 20 0.59 No 0 0 No -30 0.34 No 46 56.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68395726 + NM_133509 RAD51B 0 . . . 5.56 80.98 29 5.92 Yes 27 0.91 Yes 0 0 No -28 0.78 Yes 40 91.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84386480 - NM_139076 FAM175A 0 . . . 3.21 0 16 5.47 No 69 0.24 No 0 0 No -44 0.35 No 49 60.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68337021 + NM_133509 RAD51B 0 . . . 0.93 71.68 43 6.44 Yes -3 0.22 No 0 0 No -27 0.45 No 47 57.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215608042 - NM_000465 BARD1 0 . . . 8.46 86.3 22 4.48 No 60 0.46 No 0 0 No -29 0.33 No 37 69.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131981782 + NM_005732 RAD50 0 . . . 0.98 68.58 27 5.61 Yes 65 -5.12 No 0 0 No -26 0.87 Yes 53 27.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89702635 + NM_000314 PTEN 0 . . . 4.88 79.27 52 6.64 Yes 66 -5.34 No 0 0 No -35 0.9 Yes 47 64.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29100862 - NM_001005735 CHEK2 0 . . . 1.75 73.12 44 7.32 Yes 45 0.56 No 0 0 No -35 0.5 No 17 60.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75508060 - NM_001040108 MLH3 0 . . . 2.35 79.86 18 5.38 No 19 -1.91 No 0 0 No -22 0.59 No 42 54.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56770505 + NM_058216 RAD51C 0 . . . 3.17 62.65 21 5.06 No -2 1.13 Yes 0 0 No -20 0.74 Yes 47 79.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108146322 + NM_000051 ATM 0 . . . 6.98 79.28 34 6 Yes 9 0.89 Yes 0 0 No -20 0.56 No 49 89.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41240071 - NM_007294 BRCA1 0 . . . 5.28 74.36 22 5.12 No 7 -2.38 No 0 0 No -25 0.9 Yes 44 66.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59934419 - NM_032043 BRIP1 0 . . . 2.5 70.43 19 4.8 No 18 0.3 No 0 0 No -18 0.5 No 56 32.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37094075 + NM_000249 MLH1 0 . . . 1.26 82.73 27 6.3 Yes 48 0.87 Yes 0 0 No -26 0.48 No 48 43.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47775347 + NM_000251 MSH2 0 . . . 6.57 87.25 17 4.79 No 71 0.98 Yes 0 0 No -36 0.79 Yes 37 63.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108109870 + NM_000051 ATM 0 . . . 0.71 77.19 13 4.94 No 59 0.31 No 0 0 No -12 0.46 No 50 80.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41232902 - NM_007294 BRCA1 0 . . . 3.87 86.43 19 4.65 No 52 0.89 Yes 0 0 No -18 0.3 No 36 48.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47769314 + NM_000251 MSH2 0 . . . 6.87 85.35 18 5.25 No 71 -3.61 No 0 0 No -18 0.54 No 46 67.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29113121 - NM_001005735 CHEK2 0 . . . 4.16 69.77 28 5.34 No 21 1.71 Yes 0 0 No -22 0.48 No 42 84.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69050023 + NM_133509 RAD51B 0 . . . 0.04 0 27 6.4 Yes 48 1.09 Yes 0 0 No -26 0.75 Yes 51 32.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68969772 + NM_133509 RAD51B 0 . . . 5.21 72.38 24 5.38 No 12 1.92 Yes 0 0 No -24 0.34 No 46 86.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68645765 + NM_133509 RAD51B 0 . . . 3.32 73.68 31 6.08 Yes 54 -1.94 No 0 0 No -30 0.78 Yes 52 60.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215649108 - NM_000465 BARD1 0 . . . 7.25 82.12 26 4.81 No 44 0.98 Yes 0 0 No -20 0.49 No 30 75.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94161784 - NM_005591 MRE11 0 . . . 3.15 68.34 26 4.94 No 21 1.71 Yes 0 0 No -26 0.67 Yes 42 65.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68372402 + NM_133509 RAD51B 0 . . . 5.34 71.53 32 4.57 No 48 0.93 Yes 0 0 No -28 0.32 No 34 83.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108106548 + NM_000051 ATM 0 . . . 1.49 66.44 56 6.07 Yes 33 0.41 No 0 0 No -37 0.52 No 43 49.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69131540 + NM_133509 RAD51B 0 . . . 3.92 75.36 45 7.06 Yes 70 1.19 Yes 0 0 No -44 0.82 Yes 22 77.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108205058 + NM_000051 ATM 0 . . . 4.5 78.88 27 4.02 No 51 0.55 No 0 0 No -26 0.71 Yes 40 81.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37036787 + NM_000249 MLH1 0 . . . 1.28 69.37 52 8.36 Yes 38 0.06 No 0 0 No -51 0.67 Yes 49 59.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41239729 - NM_007294 BRCA1 0 . . . 5.52 66.02 51 7.8 Yes 41 0.42 No 0 0 No -29 0.82 Yes 49 66.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108167163 + NM_000051 ATM 0 . . . 3.59 78.03 27 5.73 Yes 8 1.05 Yes 0 0 No -31 0.51 No 50 83.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59929015 - NM_032043 BRIP1 0 . . . 3.12 65.57 68 7.94 Yes 53 -2.92 No 0 0 No -36 0.44 No 36 45.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190726227 + NM_000534 PMS1 0 . . . 0.32 74.68 22 3.92 No 38 0.55 No 0 0 No -21 0.57 No 54 80.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190654754 + NM_000534 PMS1 0 . . . 3.72 92.6 30 5.58 Yes 31 -2.65 No 0 0 No -26 0.35 No 49 80.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89697422 + NM_000314 PTEN 0 . . . 1.6 0 55 8.3 Yes 71 -2.61 No 0 0 No -54 0.34 No 12 58.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89699125 + NM_000314 PTEN 0 . . . 2.42 77.54 39 5.94 Yes 2 0.37 No 0 0 No -26 0.5 No 24 25.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68540661 + NM_133509 RAD51B 0 . . . 10.57 82.94 17 5.35 No 2 2.01 Yes 0 0 No -22 0.54 No 51 68.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68288153 + NM_133509 RAD51B 0 . . . 0.18 0 57 8.97 Yes 31 -1.96 No 0 0 No -28 0.28 No 41 59.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23620195 - NM_024675 PALB2 0 . . . 1.43 80.22 17 3.29 No 58 -3.88 No 0 0 No -23 0.43 No 48 81.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68659780 + NM_133509 RAD51B 0 . . . 8.08 83.61 22 4.22 No 11 0.92 Yes 0 0 No -18 0.79 Yes 44 84.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90958754 - NM_002485 NBN 0 . . . 7.5 84.82 31 5.45 No 12 0.48 No 0 0 No -24 0.57 No 46 95.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105208624 + NM_021930 RINT1 0 . . . 3.09 76.36 27 4.9 No 11 1.55 Yes 0 0 No -26 0.59 No 47 83.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41249289 - NM_007294 BRCA1 0 . . . 3.63 79.98 31 5.67 Yes 62 1.37 Yes 0 0 No -25 0.5 No 24 60.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68770928 + NM_004360 CDH1 0 . . . 5.93 92.58 18 4.58 No 8 0.35 No 0 0 No -17 0.82 Yes 50 47.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108206200 + NM_000051 ATM 0 . . . 0.54 63.1 92 8.24 Yes 30 1.24 Yes 0 0 No -32 0.63 No 42 59.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68706783 + NM_133509 RAD51B 0 . . . 3.2 80.18 21 7.53 Yes -1 1.07 Yes 0 0 No -20 0.49 No 43 75.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68471889 + NM_133509 RAD51B 0 . . . 4.35 90.41 26 5.48 No 33 0.99 Yes 0 0 No -26 0.69 Yes 44 66.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131965920 + NM_005732 RAD50 0 . . . 3.25 80.12 51 7.4 Yes 8 1.2 Yes 0 0 No -35 0.62 No 50 86.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190700534 + NM_000534 PMS1 0 . . . 1.51 69.79 14 5.07 No 49 0.71 No 0 0 No -24 0.33 No 55 28.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807864 + NM_004360 CDH1 0 . . . 5.55 79.3 21 5.32 No 36 1.26 Yes 0 0 No -20 0.29 No 22 54.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68691433 + NM_133509 RAD51B 0 . . . 2.19 87.56 17 6.48 Yes 67 1.19 Yes 0 0 No -16 0.79 Yes 42 72.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190729565 + NM_000534 PMS1 0 . . . 1.54 66.88 25 5.57 Yes 34 0.55 No 0 0 No -50 0.71 Yes 52 38.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68847497 + NM_004360 CDH1 0 . . . 1.24 86.74 15 5.48 No 46 1.18 Yes 0 0 No -29 0.68 Yes 48 50.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68405331 + NM_133509 RAD51B 0 . . . 0.11 66.3 27 6.32 Yes 12 0.38 No 0 0 No -26 0.8 Yes 35 35.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45802748 - NM_001048171 MUTYH 0 . . . 0.26 81.03 24 5.92 Yes 23 0.36 No 0 0 No -23 0.83 Yes 46 75.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68491683 + NM_133509 RAD51B 0 . . . 3.76 79.95 23 5.6 Yes 0 0.87 Yes 0 0 No -22 0.57 No 53 68.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75497011 - NM_001040108 MLH3 0 . . . 8.84 87.66 11 4.9 No 74 -4.26 No 0 0 No -37 0.25 No 40 60.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68601772 + NM_133509 RAD51B 0 . . . 10.87 87.57 32 6 Yes 11 1 Yes 0 0 No -38 0.5 No 47 57.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68673213 + NM_133509 RAD51B 0 . . . 1.76 67.51 28 5.29 No 20 1.12 Yes 0 0 No -27 0.68 Yes 21 59.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94202745 - NM_005591 MRE11 0 . . . 1.57 72.54 28 6.31 Yes 13 0.47 No 0 0 No -32 0.6 No 45 90.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68351542 + NM_133509 RAD51B 0 . . . 0.71 62.94 35 6.4 Yes 71 0.49 No 0 0 No -34 0.93 Yes 19 88.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89630025 + NM_000314 PTEN 0 . . . 1.97 69.85 15 4.53 No 18 1.18 Yes 0 0 No -17 0.46 No 40 56.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69144551 + NM_133509 RAD51B 0 . . . 4 0 35 6.22 Yes 49 -2.99 No 0 0 No -34 0.45 No 48 69.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68563738 + NM_133509 RAD51B 0 . . . 6.1 78.89 23 4.9 No 17 0.96 Yes 0 0 No -22 0.92 Yes 46 76.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6033723 - NM_000535 PMS2 0 . . . 5.27 71.63 26 5.1 No 66 1.7 Yes 0 0 No -25 0.76 Yes 44 53.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41247498 - NM_007294 BRCA1 0 . . . 3.11 83.33 18 4.9 No 76 1.48 Yes 0 0 No -26 0.35 No 50 76.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37045403 + NM_000249 MLH1 0 . . . 0.99 80.07 11 4 No 74 0.54 No 0 0 No -25 0.55 No 47 75.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32898285 + NM_000059 BRCA2 0 . . . 1.64 0 15 3.82 No 64 0.64 No 0 0 No -41 0.96 Yes 52 35.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68566827 + NM_133509 RAD51B 0 . . . 1.94 56.52 19 6.16 Yes 13 1.23 Yes 0 0 No -18 0.73 Yes 45 73.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68677474 + NM_133509 RAD51B 0 . . . 0.38 61 28 4.85 No 65 0.62 No 0 0 No -27 0.81 Yes 45 52.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94199317 - NM_005591 MRE11 0 . . . 6.36 76.3 43 6.45 Yes 63 1.17 Yes 0 0 No -29 0.81 Yes 39 31.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59757419 - NM_032043 BRIP1 0 . . . 2.13 66.03 68 8.3 Yes 62 1.54 Yes 0 0 No -27 0.86 Yes 50 63.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90974413 - NM_002485 NBN 0 . . . 3.44 60.93 18 4.8 No 76 -6.27 No 0 0 No -50 0.39 No 42 56.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68540506 + NM_133509 RAD51B 0 . . . 0.2 0 24 7 Yes 16 0.46 No 0 0 No -23 0.8 Yes 42 56.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59871440 - NM_032043 BRIP1 0 . . . 8.38 82.95 23 4.94 No 9 1.39 Yes 0 0 No -22 0.61 No 49 52.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41005491 + NM_001164269 RAD51 0 . . . 0.15 0 23 5.11 No 72 1.51 Yes 0 0 No -22 0.87 Yes 15 93.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47679132 + NM_000251 MSH2 0 . . . 1.4 82.65 20 7.93 Yes 63 0.7 No 0 0 No -19 0.77 Yes 49 62.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47758312 + NM_000251 MSH2 0 . . . 0.05 81.19 30 9.24 Yes 65 -5.19 No 0 0 No -29 0.94 Yes 48 56.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190658263 + NM_000534 PMS1 0 . . . 1.73 69.52 34 6.16 Yes 61 -3.79 No 0 0 No -31 0.52 No 39 33.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89711465 + NM_000314 PTEN 0 . . . 1.56 71.56 26 5.29 No 8 1.53 Yes 0 0 No -45 0.79 Yes 44 88.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56772510 + NM_058216 RAD51C 0 . . . 0.18 58.4 31 7.07 Yes 49 0.76 No 0 0 No -30 0.87 Yes 57 61.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108099347 + NM_000051 ATM 0 . . . 4.72 80.69 21 5.09 No 41 0.85 Yes 0 0 No -24 0.7 Yes 17 78.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59910256 - NM_032043 BRIP1 0 . . . 3.93 62.92 17 5.29 No 15 1.89 Yes 0 0 No -21 0.62 No 43 77.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68992775 + NM_133509 RAD51B 0 . . . 2.59 69.15 28 5.38 No 28 0.59 No 0 0 No -27 0.82 Yes 42 64.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68877589 + NM_133509 RAD51B 0 . . . 5 80.02 19 4.67 No 32 -1.53 No 0 0 No -18 0.91 Yes 47 54.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59932388 - NM_032043 BRIP1 0 . . . 3.3 79.71 10 4.9 No 73 1.65 Yes 0 0 No -19 0.5 No 45 66.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68648527 + NM_133509 RAD51B 0 . . . 5.95 81.14 13 6.86 Yes 71 -5.18 No 0 0 No -30 0.87 Yes 46 35.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47774703 + NM_000251 MSH2 0 . . . 2.34 0 40 7.05 Yes 10 0.85 Yes 0 0 No -39 0.84 Yes 43 67.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68909739 + NM_133509 RAD51B 0 . . . 7.37 82.92 28 5.23 No 10 1.55 Yes 0 0 No -27 0.77 Yes 44 90.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68649543 + NM_133509 RAD51B 0 . . . 4.34 63.99 37 8.1 Yes -1 0.11 No 0 0 No -28 0.37 No 45 46.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104168284 - NM_001100119 XRCC3 0 . . . 0.31 74.74 24 5.37 No 45 0.92 Yes 0 0 No -23 0.56 No 52 56.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68919538 + NM_133509 RAD51B 0 . . . 0.38 80.66 24 4.8 No 55 1.54 Yes 0 0 No -23 0.73 Yes 52 65.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68305871 + NM_133509 RAD51B 0 . . . 3.76 80.61 42 6.4 Yes 4 0.84 Yes 0 0 No -34 0.62 No 47 96.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69126141 + NM_133509 RAD51B 0 . . . 8.71 88.74 38 6.36 Yes 73 0.97 Yes 0 0 No -25 0.31 No 47 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108115804 + NM_000051 ATM 0 . . . 3.07 69.08 24 5.48 No 22 0.28 No 0 0 No -28 0.59 No 36 85.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68852994 + NM_004360 CDH1 0 . . . 5.21 79.28 34 4.9 No 58 1.02 Yes 0 0 No -41 0.61 No 40 94.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41248747 - NM_007294 BRCA1 0 . . . 1.08 64.03 27 5.01 No 3 0.13 No 0 0 No -22 0.79 Yes 45 50.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69133670 + NM_133509 RAD51B 0 . . . 2.14 76.03 66 6.89 Yes 21 0.94 Yes 0 0 No -32 0.66 No 37 74.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131913228 + NM_005732 RAD50 0 . . . 8.3 86.91 50 7.74 Yes 17 0.26 No 0 0 No -47 0.61 No 41 64.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68529796 + NM_133509 RAD51B 0 . . . 6.09 79.38 15 5.74 Yes 16 1.1 Yes 0 0 No -29 0.45 No 42 80.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108231935 + NM_000051 ATM 0 . . . 2.39 71.8 25 5.32 No 14 0.6 No 0 0 No -24 0.58 No 44 50.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29134377 - NM_001005735 CHEK2 0 . . . 6.04 75.45 13 4.25 No 21 1.67 Yes 0 0 No -22 0.54 No 37 90.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33425101 - NM_002878 RAD51D 0 . . . 6.96 87.04 15 3.92 No 24 1.1 Yes 0 0 No -35 0.52 No 45 63.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75519292 - NM_001040108 MLH3 0 . . . 2.11 86.69 20 5.1 No 7 0.58 No 0 0 No -19 0.9 Yes 45 86.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6011887 - NM_000535 PMS2 0 . . . 2.31 0 35 5.06 No 67 0.36 No 0 0 No -35 0.41 No 29 25.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68577886 + NM_133509 RAD51B 0 . . . 4.5 81.96 39 6.2 Yes 31 1.02 Yes 0 0 No -26 0.72 Yes 38 58.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41001378 + NM_001164269 RAD51 0 . . . 0.22 69.3 29 5.57 Yes 11 0.37 No 0 0 No -28 0.59 No 44 51.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131899538 + NM_005732 RAD50 0 . . . 7.05 86.98 43 5.78 Yes 57 1.65 Yes 0 0 No -30 0.53 No 45 82.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48028212 + NM_000179 MSH6 0 . . . 0.22 75.67 22 5.37 No 68 -4.39 No 0 0 No -21 0.87 Yes 56 34.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68382334 + NM_133509 RAD51B 0 . . . 2.92 74.97 33 6 Yes 74 -2.63 No 0 0 No -32 0.65 No 52 60.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56782906 + NM_058216 RAD51C 0 . . . 0.74 64.9 39 6.55 Yes 34 1.15 Yes 0 0 No -38 0.96 Yes 24 58.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68624898 + NM_133509 RAD51B 0 . . . 5.07 70.26 20 5.48 No 72 1.32 Yes 0 0 No -23 0.65 No 56 33.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68766970 + NM_133509 RAD51B 0 . . . 6.88 81.27 18 5.68 Yes 56 2.01 Yes 0 0 No -25 0.46 No 49 51.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59788590 - NM_032043 BRIP1 0 . . . 2.3 73.96 34 6.32 Yes 37 0.74 No 0 0 No -33 0.84 Yes 21 53.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48024930 + NM_000179 MSH6 0 . . . 3.86 80.58 10 4.59 No 14 0.43 No 0 0 No -22 0.66 No 49 71.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68843172 + NM_004360 CDH1 0 . . . 4.29 84 27 3.9 No 2 0.76 No 0 0 No -26 0.35 No 19 56.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29131200 - NM_001005735 CHEK2 0 . . . 0.57 77.77 15 5.1 No 34 1.19 Yes 0 0 No -51 0.47 No 24 63.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47719073 + NM_000251 MSH2 0 . . . 2.93 78.71 41 5.21 No 73 -3.56 No 0 0 No -23 0.64 No 48 35.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59762812 - NM_032043 BRIP1 0 . . . 1.93 81.02 20 6.85 Yes 67 -4.26 No 0 0 No -27 0.47 No 48 67.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642294 - NM_000465 BARD1 0 . . . 5.47 80.65 16 4.69 No 19 0.81 Yes 0 0 No -20 0.43 No 39 70.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68596664 + NM_133509 RAD51B 0 . . . 3.3 66.71 22 5.29 No 4 0.24 No 0 0 No -21 0.69 Yes 54 54.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32950076 + NM_000059 BRCA2 0 . . . 1.02 68.12 25 4.75 No 55 -3.75 No 0 0 No -25 0.6 No 42 76.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23632091 - NM_024675 PALB2 0 . . . 6.95 88.5 29 5.94 Yes 7 0.98 Yes 0 0 No -23 0.7 Yes 51 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41196516 - NM_007294 BRCA1 0 . . . 2.92 69.42 32 5.85 Yes 26 0.72 No 0 0 No -31 0.61 No 32 89.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68359453 + NM_133509 RAD51B 0 . . . 1.47 61.56 22 5.64 Yes 32 0.66 No 0 0 No -25 0.73 Yes 20 76.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68330168 + NM_133509 RAD51B 0 . . . 0.4 0 32 6.08 Yes 72 -4.95 No 0 0 No -31 0.73 Yes 57 73.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68476213 + NM_133509 RAD51B 0 . . . 7.4 89.6 16 4.61 No 75 1.18 Yes 0 0 No -27 0.68 Yes 46 58.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47752459 + NM_000251 MSH2 0 . . . 1.46 0 31 5.26 No 5 0.77 Yes 0 0 No -24 0.37 No 45 41.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48028856 + NM_000179 MSH6 0 . . . 1.01 0 27 3.53 No 54 1.08 Yes 0 0 No -27 0.4 No 44 59.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89663532 + NM_000314 PTEN 0 . . . 1.65 71.09 48 7 Yes 11 0.25 No 0 0 No -31 0.37 No 47 87.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33448558 - NM_002878 RAD51D 0 . . . 1.87 79.96 14 4.01 No -2 0.09 No 0 0 No -19 0.47 No 47 58.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69092986 + NM_133509 RAD51B 0 . . . 2.93 76.76 29 4.36 No 19 -2.11 No 0 0 No -24 0.88 Yes 46 21.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75507389 - NM_001040108 MLH3 0 . . . 5.61 85.78 13 5.39 No 3 0.66 No 0 0 No -22 0.53 No 27 88.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94185397 - NM_005591 MRE11 0 . . . 6.52 83.9 58 7.31 Yes 67 1.17 Yes 0 0 No -41 0.13 No 37 87.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108160796 + NM_000051 ATM 0 . . . 3.08 78.32 34 5.74 Yes 38 1.77 Yes 0 0 No -29 0.56 No 20 81.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104163577 - NM_001100119 XRCC3 0 . . . 1.81 69.86 21 4.92 No -3 0.52 No 0 0 No -25 0.4 No 45 73.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215631239 - NM_000465 BARD1 0 . . . 1.14 65.99 15 5.2 No 44 0.96 Yes 0 0 No -20 0.34 No 42 62.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68977280 + NM_133509 RAD51B 0 . . . 9.08 84.17 40 8.07 Yes -4 -0.18 No 0 0 No -39 0.44 No 48 46.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68846567 + NM_133509 RAD51B 0 . . . 0.19 58.74 29 5.91 Yes 69 -5.83 No 0 0 No -32 0.54 No 16 44.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215631261 - NM_000465 BARD1 0 . . . 6.28 90.34 31 6.08 Yes 22 0.95 Yes 0 0 No -30 0.67 Yes 36 73.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215602434 - NM_000465 BARD1 0 . . . 2.96 75.44 24 8.12 Yes 67 0.96 Yes 0 0 No -23 0.75 Yes 47 88.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94170190 - NM_005591 MRE11 0 . . . 0.85 0 17 5.99 Yes 66 -3.99 No 0 0 No -19 0.43 No 46 81.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68898981 + NM_133509 RAD51B 0 . . . 1.78 0 39 7.43 Yes 43 0 No 0 0 No -38 0.62 No 15 44.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47703365 + NM_000251 MSH2 0 . . . 5.48 81.05 18 4.94 No 11 1.72 Yes 0 0 No -23 0.51 No 47 65.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56770037 + NM_058216 RAD51C 0 . . . 5.4 75.1 29 5.78 Yes 37 -2.29 No 0 0 No -24 0.54 No 46 31.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37066681 + NM_000249 MLH1 0 . . . 0.43 74.73 21 6 Yes 62 -4.64 No 0 0 No -48 0.52 No 48 52.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108108056 + NM_000051 ATM 0 . . . 5.8 75.29 28 5.38 No 24 1.42 Yes 0 0 No -27 0.64 No 34 89.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105184813 + NM_021930 RINT1 0 . . . 0.88 64.8 28 6.24 Yes 62 1.06 Yes 0 0 No -27 0.82 Yes 60 42.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68834787 + NM_004360 CDH1 0 . . . 3.79 64.99 24 4.79 No 42 0.94 Yes 0 0 No -23 0.65 No 16 63.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68857971 + NM_004360 CDH1 0 . . . 1.42 74.02 17 5.48 No 41 -0.39 No 0 0 No -19 0.57 No 49 69.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23626769 - NM_024675 PALB2 0 . . . 0.76 69.34 22 4.93 No 41 0.41 No 0 0 No -21 0.75 Yes 48 35.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108095291 + NM_000051 ATM 0 . . . 10.99 85.1 36 4.77 No 37 1.51 Yes 0 0 No -30 0.75 Yes 47 85.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23638208 - NM_024675 PALB2 0 . . . 1.22 73.53 16 4.88 No 63 0.72 No 0 0 No -25 0.59 No 54 75.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108141517 + NM_000051 ATM 0 . . . 7.38 89.48 26 7.74 Yes 9 1.13 Yes 0 0 No -30 0.63 No 49 94.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215634605 - NM_000465 BARD1 0 . . . 1.73 77 28 3.83 No 59 0.39 No 0 0 No -25 0.79 Yes 50 74.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69018640 + NM_133509 RAD51B 0 . . . 1.1 71.81 32 5.8 Yes 25 0.48 No 0 0 No -32 0.56 No 28 58.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152366263 - NM_005431 XRCC2 0 . . . 0.12 0 18 4.89 No 37 1.05 Yes 0 0 No -25 0.62 No 14 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108105741 + NM_000051 ATM 0 . . . 4.28 74.05 26 4.91 No 49 0.81 Yes 0 0 No -25 0.4 No 37 26.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69019292 + NM_133509 RAD51B 0 . . . 2.34 65 23 5.83 Yes 76 1.13 Yes 0 0 No -27 0.55 No 45 52.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89668601 + NM_000314 PTEN 0 . . . 8.45 93.06 28 5.57 Yes 9 0.98 Yes 0 0 No -27 0.55 No 40 64.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94196757 - NM_005591 MRE11 0 . . . 3.51 69.24 26 5.77 Yes 54 0.95 Yes 0 0 No -25 0.72 Yes 48 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68403126 + NM_133509 RAD51B 0 . . . 0.62 0 25 6.47 Yes 35 1.38 Yes 0 0 No -24 0.76 Yes 43 56.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68548280 + NM_133509 RAD51B 0 . . . 0.58 69.8 25 4.75 No 4 1.06 Yes 0 0 No -20 0.4 No 28 73.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68972533 + NM_133509 RAD51B 0 . . . 3.13 68.34 15 5.26 No 72 -3.84 No 0 0 No -14 0.43 No 40 51.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68860858 + NM_004360 CDH1 0 . . . 2.13 76.37 25 5.31 No 6 0.21 No 0 0 No -22 0.83 Yes 47 93.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190721850 + NM_000534 PMS1 0 . . . 0.96 67.54 22 5.08 No 56 -4.11 No 0 0 No -25 0.55 No 42 50.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94173459 - NM_005591 MRE11 0 . . . 3.87 83.84 14 4.98 No 33 1.41 Yes 0 0 No -24 0.5 No 44 46.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215625363 - NM_000465 BARD1 0 . . . 5.54 87.83 20 5.66 Yes 50 0.89 Yes 0 0 No -27 0.53 No 45 36.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90967880 - NM_002485 NBN 0 . . . 5.93 78.52 23 3.83 No 4 0.52 No 0 0 No -30 0.58 No 38 89.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69144346 + NM_133509 RAD51B 0 . . . 1.72 66.71 36 5.79 Yes 57 0.72 No 0 0 No -36 0.32 No 34 55.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190674591 + NM_000534 PMS1 0 . . . 2 84.62 19 5.73 Yes 9 0.78 Yes 0 0 No -33 0.83 Yes 43 52.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32913013 + NM_000059 BRCA2 0 . . . 1.87 0 52 6.55 Yes -3 0.72 No 0 0 No -31 0.38 No 53 50.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29100068 - NM_001005735 CHEK2 0 . . . 2.32 0 15 5.1 No NA NA NA 0 0 No -21 0.67 Yes 53 38.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29099348 - NM_001005735 CHEK2 0 . . . 1.01 0 19 4.16 No 65 1.2 Yes 0 0 No -26 0.41 No 53 42.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105202171 + NM_021930 RINT1 0 . . . 4.51 75.03 15 5.39 No 52 0.04 No 0 0 No -44 0.24 No 48 71.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68522806 + NM_133509 RAD51B 0 . . . 6.6 87 19 4.58 No 28 0.44 No 0 0 No -50 0.56 No 47 61.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68407118 + NM_133509 RAD51B 0 . . . 3.27 68.69 29 4 No 1 0.84 Yes 0 0 No -28 0.83 Yes 51 44.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90997701 - NM_002485 NBN 0 . . . 2.32 78.25 23 4.83 No 9 1.35 Yes 0 0 No -22 0.71 Yes 49 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131954804 + NM_005732 RAD50 0 . . . 1.72 61.31 33 8.64 Yes 28 0.59 No 0 0 No -37 0.58 No 44 66.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89675826 + NM_000314 PTEN 0 . . . 8.2 79.37 35 6.4 Yes 20 1.06 Yes 0 0 No -34 0.84 Yes 38 71.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131941498 + NM_005732 RAD50 0 . . . 1.12 58.65 18 4.84 No 72 -5.38 No 0 0 No -21 0.24 No 47 32.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104177323 - NM_001100119 XRCC3 0 . . . 3.18 69.51 24 5.35 No 66 0.21 No 0 0 No -35 0.45 No 41 70.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68830462 + NM_004360 CDH1 0 . . . 0.46 72.59 20 6.08 Yes -3 0.44 No 0 0 No -19 0.7 Yes 44 49.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59807206 - NM_032043 BRIP1 0 . . . 6.4 73.2 17 6.93 Yes 1 1.27 Yes 0 0 No -27 0.6 No 42 51.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6027176 - NM_000535 PMS2 0 . . . 3.96 78.62 24 6.32 Yes 66 -3.74 No 0 0 No -23 0.69 Yes 51 41.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59918732 - NM_032043 BRIP1 0 . . . 6.13 77.75 35 4.26 No 14 1.08 Yes 0 0 No -35 0.51 No 44 93.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68720220 + NM_133509 RAD51B 0 . . . 3.97 88.62 26 5.2 No 26 1.85 Yes 0 0 No -25 0.86 Yes 32 68.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89623115 + NM_000314 PTEN 0 . . . 0.3 64.3 19 6.24 Yes NA NA NA 0 0 No -18 0.53 No 52 29.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21981931 - NM_000077 CDKN2A 0 . . . 5.58 83.96 24 5.46 No 76 -2.23 No 0 0 No -23 0.44 No 47 51.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68781414 + NM_004360 CDH1 0 . . . 6.81 79.88 20 5.27 No 29 -2.73 No 0 0 No -27 0.58 No 37 44.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6042584 - NM_000535 PMS2 0 . . . 2.7 70.19 49 7.15 Yes 25 0.32 No 0 0 No -41 0.42 No 51 48.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68719931 + NM_133509 RAD51B 0 . . . 1.37 75.82 21 4.37 No 21 0.48 No 0 0 No -23 0.43 No 44 44.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108117854 + NM_000051 ATM 0 . . . 4.9 83.54 25 5.39 No 9 0.37 No 0 0 No -24 0.63 No 49 82.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59754911 - NM_032043 BRIP1 0 . . . 3.04 62.9 25 4.79 No 28 0.17 No 0 0 No -21 0.76 Yes 46 66.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68548865 + NM_133509 RAD51B 0 . . . 1.03 77.8 45 7.14 Yes 10 1.3 Yes 0 0 No -21 0.44 No 48 87.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68801663 + NM_004360 CDH1 0 . . . 5.5 85.36 22 5.64 Yes 69 0.63 No 0 0 No -20 0.27 No 46 84.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59856623 - NM_032043 BRIP1 0 . . . 7.56 81.61 14 5.2 No 15 0.43 No 0 0 No -24 0.29 No 43 57.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68771594 + NM_133509 RAD51B 0 . . . 0.1 68.69 35 5.83 Yes 20 0.57 No 0 0 No -27 0.84 Yes 38 88.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190695745 + NM_000534 PMS1 0 . . . 7.08 84.76 30 5.66 Yes 6 1.1 Yes 0 0 No -29 0.84 Yes 52 53.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68682484 + NM_133509 RAD51B 0 . . . 1.61 0 27 5.2 No 20 -3.16 No 0 0 No -48 0.49 No 47 77.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84406512 - NM_139076 FAM175A 0 . . . 1.34 0 14 4.47 No 68 0.87 Yes 0 0 No -35 0.62 No 35 41.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68487839 + NM_133509 RAD51B 0 . . . 4.67 68.87 17 5.28 No 30 0.57 No 0 0 No -24 0.63 No 48 49.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69085647 + NM_133509 RAD51B 0 . . . 8.76 89.04 24 6.7 Yes 8 1.89 Yes 0 0 No -23 0.94 Yes 50 97.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68989749 + NM_133509 RAD51B 0 . . . 5.27 86.91 22 5.24 No 28 1.76 Yes 0 0 No -24 0.51 No 42 61.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84395288 - NM_139076 FAM175A 0 . . . 0.25 0 25 5.27 No 62 -0.8 No 0 0 No -22 0.48 No 40 49.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90988172 - NM_002485 NBN 0 . . . 1.79 0 21 5.1 No 45 1.53 Yes 0 0 No -21 0.55 No 47 56.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89710942 + NM_000314 PTEN 0 . . . 6.27 84.59 19 4.58 No 29 0.32 No 0 0 No -18 0.68 Yes 29 70.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68591202 + NM_133509 RAD51B 0 . . . 4.44 81.1 49 7.48 Yes 7 0.7 No 0 0 No -26 0.83 Yes 46 91.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89720463 + NM_000314 PTEN 0 . . . 0.55 62.42 24 5.48 No 39 -4.6 No 0 0 No -23 0.74 Yes 39 45.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68330472 + NM_133509 RAD51B 0 . . . 1.06 74.95 31 5.28 No 14 0.45 No 0 0 No -57 0.5 No 44 51.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105171211 + NM_021930 RINT1 0 . . . 6.37 76.63 13 3.62 No 67 1.26 Yes 0 0 No -33 0.78 Yes 33 94.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105190891 + NM_021930 RINT1 0 . . . 4.67 78.5 20 4.69 No 33 0.04 No 0 0 No -32 0.57 No 48 77.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108093355 + NM_000051 ATM 0 . . . 5.25 84.64 40 4.49 No 76 -5.11 No 0 0 No -27 0.58 No 41 65.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68415926 + NM_133509 RAD51B 0 . . . 2.67 0 29 5.45 No 19 1.39 Yes 0 0 No -28 0.77 Yes 51 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89700553 + NM_000314 PTEN 0 . . . 4.33 69.68 30 5.62 Yes 75 -3.71 No 0 0 No -25 0.73 Yes 44 57.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59838081 - NM_032043 BRIP1 0 . . . 5.87 84.36 16 4.47 No 13 0.23 No 0 0 No -15 0.42 No 29 90.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41257759 - NM_007294 BRCA1 0 . . . 5.17 77.15 29 5.78 Yes 20 0.75 No 0 0 No -28 0.88 Yes 38 84.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215594524 - NM_000465 BARD1 0 . . . 1.57 65.8 16 5.1 No 27 -3.22 No 0 0 No -45 0.66 No 42 34.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68374030 + NM_133509 RAD51B 0 . . . 11.94 89.16 39 6.24 Yes 56 0.99 Yes 0 0 No -33 0.63 No 43 67.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6036679 - NM_000535 PMS2 0 . . . 1.87 80.12 21 5.27 No 6 1.13 Yes 0 0 No -27 0.57 No 52 68.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69002147 + NM_133509 RAD51B 0 . . . 8.69 81.42 26 6.34 Yes 23 1.54 Yes 0 0 No -25 0.89 Yes 44 56.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23617765 - NM_024675 PALB2 0 . . . 0.77 68.35 24 5.29 No 13 -2.84 No 0 0 No -23 0.71 Yes 50 59.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108193569 + NM_000051 ATM 0 . . . 7.3 73.64 26 5.18 No 27 1.21 Yes 0 0 No -25 0.69 Yes 51 52.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68409727 + NM_133509 RAD51B 0 . . . 5.25 68.66 22 6.46 Yes 19 -1.59 No 0 0 No -21 0.68 Yes 39 82.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37059642 + NM_000249 MLH1 0 . . . 0.31 61.05 16 5.39 No 30 -2.22 No 0 0 No -22 0.54 No 42 51.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849741 - NM_032043 BRIP1 0 . . . 7.28 78.86 30 5.3 No 29 1.07 Yes 0 0 No -51 0.48 No 29 68.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75486961 - NM_001040108 MLH3 0 . . . 4.3 70.48 38 8.12 Yes 37 1.41 Yes 0 0 No -37 0.92 Yes 48 75.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68870349 + NM_004360 CDH1 0 . . . 4.34 75.18 17 5.56 Yes 72 1.09 Yes 0 0 No -28 0.32 No 48 55.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190648123 + NM_000534 PMS1 0 . . . 1.11 66.67 34 6.99 Yes 38 0.68 No 0 0 No -33 0.64 No 40 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131970163 + NM_005732 RAD50 0 . . . 3.62 72.15 30 5.08 No 24 0.71 No 0 0 No -29 0.59 No 45 84.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68659904 + NM_133509 RAD51B 0 . . . 0.87 85.52 36 5.73 Yes 54 0.36 No 0 0 No -35 0.93 Yes 45 83.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215671834 - NM_000465 BARD1 0 . . . 4.37 74.56 10 4 No 69 0.93 Yes 0 0 No -34 0.84 Yes 57 35.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215616994 - NM_000465 BARD1 0 . . . 0.2 64.32 18 4.4 No 70 -4.61 No 0 0 No -39 0.71 Yes 53 46.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56786533 + NM_058216 RAD51C 0 . . . 4.68 83.49 18 4.9 No 35 1.45 Yes 0 0 No -17 0.49 No 47 85.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68491236 + NM_133509 RAD51B 0 . . . 5.64 84.94 19 5.89 Yes 31 1.52 Yes 0 0 No -23 0.71 Yes 37 70.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41219409 - NM_007294 BRCA1 0 . . . 4.54 67.4 20 4.45 No 48 0.63 No 0 0 No -22 0.67 Yes 42 58.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68801336 + NM_004360 CDH1 0 . . . 6.11 82.31 12 4.24 No 61 1.25 Yes 0 0 No -54 0.54 No 55 50.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59941767 - NM_032043 BRIP1 0 . . . 0.91 68.6 21 5.92 Yes 65 -4.12 No 0 0 No -20 0.94 Yes 48 62.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47676042 + NM_000251 MSH2 0 . . . 0.72 74.68 50 8.13 Yes 53 0.64 No 0 0 No -25 0.61 No 36 60.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6025003 - NM_000535 PMS2 0 . . . 4.35 83.28 13 5.09 No 51 1.27 Yes 0 0 No -42 0.66 Yes 41 89.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68929031 + NM_133509 RAD51B 0 . . . 9.12 87.46 46 5.11 No 75 -2.9 No 0 0 No -26 0.55 No 48 46.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47771729 + NM_000251 MSH2 0 . . . 7.92 87.62 36 6.47 Yes 6 0.5 No 0 0 No -29 0.87 Yes 52 69.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32948641 + NM_000059 BRCA2 0 . . . 2.58 72 40 7.47 Yes 39 0.99 Yes 0 0 No -39 0.75 Yes 45 82.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23642594 - NM_024675 PALB2 0 . . . 3.01 0 37 4.49 No 36 1.74 Yes 0 0 No -23 0.75 Yes 35 80.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69130919 + NM_133509 RAD51B 0 . . . 4.86 70.4 11 4.9 No 64 0.24 No 0 0 No -25 0.77 Yes 49 76.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190705921 + NM_000534 PMS1 0 . . . 1.07 0 22 6.52 Yes 37 1.72 Yes 0 0 No -21 0.82 Yes 49 59.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69140805 + NM_133509 RAD51B 0 . . . 5.33 80.04 16 3.99 No 8 -1.51 No 0 0 No -22 0.45 No 45 59.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131907532 + NM_005732 RAD50 0 . . . 2.1 78.03 38 6.63 Yes 53 0.77 Yes 0 0 No -35 0.6 No 40 94.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41235618 - NM_007294 BRCA1 0 . . . 3.94 75.47 22 5.92 Yes 47 -1.54 No 0 0 No -21 0.55 No 51 75.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47730496 + NM_000251 MSH2 0 . . . 1.88 74.62 19 4.24 No 1 0.77 Yes 0 0 No -18 0.56 No 52 61.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131949025 + NM_005732 RAD50 0 . . . 2.03 74.35 16 5.92 Yes 56 1 Yes 0 0 No -15 0.49 No 54 76.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59839800 - NM_032043 BRIP1 0 . . . 9.07 79.56 14 5 No 36 1.57 Yes 0 0 No -26 0.48 No 40 72.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69108878 + NM_133509 RAD51B 0 . . . 4.26 77.04 21 5.2 No 75 0.98 Yes 0 0 No -26 0.49 No 39 74.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47762767 + NM_000251 MSH2 0 . . . 8.49 87.8 11 3.98 No 39 0.29 No 0 0 No -35 0.64 No 49 69.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37088283 + NM_000249 MLH1 0 . . . 3.25 80.12 41 6.71 Yes 75 1.16 Yes 0 0 No -40 0.72 Yes 50 87.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68637637 + NM_133509 RAD51B 0 . . . 0.03 0 30 8.24 Yes -4 0.32 No 0 0 No -29 0.88 Yes 58 64.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32901677 + NM_000059 BRCA2 0 . . . 0.47 63.47 59 6.93 Yes 45 1.34 Yes 0 0 No -28 0.59 No 52 45.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68670189 + NM_133509 RAD51B 0 . . . 10 80.03 15 5.39 No 67 0.47 No 0 0 No -28 0.3 No 43 67.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68658388 + NM_133509 RAD51B 0 . . . 1.69 74.28 26 7.75 Yes 67 0.34 No 0 0 No -25 0.64 No 45 87.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68784919 + NM_004360 CDH1 0 . . . 3.88 76.79 32 5.7 Yes 17 1 Yes 0 0 No -31 0.54 No 41 62.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108105619 + NM_000051 ATM 0 . . . 5.43 72.16 26 3.96 No 19 0.23 No 0 0 No -25 0.41 No 33 76.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190708077 + NM_000534 PMS1 0 . . . 4.18 71 28 5.58 Yes 35 0.29 No 0 0 No -27 0.73 Yes 37 53.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673158 + NM_000534 PMS1 0 . . . 1.04 0 27 5.2 No 62 0.94 Yes 0 0 No -56 0.64 No 39 84.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68821726 + NM_133509 RAD51B 0 . . . 1.14 0 18 4.8 No 65 1.48 Yes 0 0 No -16 0.36 No 45 77.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59784709 - NM_032043 BRIP1 0 . . . 4.5 70.13 12 4.08 No 72 1.07 Yes 0 0 No -27 0.73 Yes 43 82.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89674998 + NM_000314 PTEN 0 . . . 6.22 78.54 28 5.23 No 54 0.17 No 0 0 No -27 0.62 No 37 86.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68850651 + NM_133509 RAD51B 0 . . . 5.91 71.24 14 5 No 57 0.56 No 0 0 No -31 0.2 No 43 88.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23635824 - NM_024675 PALB2 0 . . . 8.02 82.55 21 4.8 No 72 -3.38 No 0 0 No -20 0.83 Yes 42 92.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190660301 + NM_000534 PMS1 0 . . . 3.8 75.75 16 4.47 No 21 2.16 Yes 0 0 No -21 0.56 No 49 84.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52435278 - NM_004656 BAP1 0 . . . 3.96 83.63 19 6.76 Yes 58 -2.49 No 0 0 No -25 0.42 No 54 58.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68845270 + NM_004360 CDH1 0 . . . 3.61 81.37 12 5.1 No 57 -3.6 No 0 0 No -23 0.37 No 53 60.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6046090 - NM_000535 PMS2 0 . . . 2.03 75.25 14 4.4 No 34 1.19 Yes 0 0 No -41 0.42 No 24 41.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105192172 + NM_021930 RINT1 0 . . . 3.36 76.79 26 7.32 Yes 28 1.07 Yes 0 0 No -30 0.87 Yes 48 77.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68501196 + NM_133509 RAD51B 0 . . . 3.7 76.86 30 8.28 Yes 2 1.46 Yes 0 0 No -29 0.52 No 44 62.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69015776 + NM_133509 RAD51B 0 . . . 2.45 79.02 32 4.68 No 70 0.77 No 0 0 No -27 0.45 No 49 89.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47734993 + NM_000251 MSH2 0 . . . 7.7 84.98 34 5.65 Yes 23 0.69 No 0 0 No -26 0.55 No 34 58.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32892997 + NM_000059 BRCA2 0 . . . 1.91 73.39 26 5.1 No 69 -4.88 No 0 0 No -25 0.75 Yes 45 84.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32969863 + NM_000059 BRCA2 0 . . . 4.73 80.74 37 7.52 Yes 6 0.48 No 0 0 No -25 0.35 No 51 37.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37081588 + NM_000249 MLH1 0 . . . 6.23 75.39 32 6.24 Yes 50 0.82 Yes 0 0 No -28 0.55 No 41 64.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68812113 + NM_004360 CDH1 0 . . . 3.55 71.52 24 6.63 Yes 52 0.05 No 0 0 No -26 0.44 No 48 78.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215634206 - NM_000465 BARD1 0 . . . 0.66 83.52 42 6.15 Yes 37 1.55 Yes 0 0 No -20 0.59 No 31 43.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69062998 + NM_133509 RAD51B 0 . . . 7.8 90.33 31 5.79 Yes 68 0.69 No 0 0 No -30 0.66 No 39 93.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47664218 + NM_000251 MSH2 0 . . . 9.22 81.06 18 4.68 No 6 0.82 Yes 0 0 No -25 0.81 Yes 38 46.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59933435 - NM_032043 BRIP1 0 . . . 10.84 87.71 17 5.29 No 48 0.41 No 0 0 No -26 0.44 No 43 76.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69139969 + NM_133509 RAD51B 0 . . . 4.44 83.81 31 6.93 Yes 15 0.42 No 0 0 No -34 0.54 No 43 81.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68846488 + NM_004360 CDH1 0 . . . 0.89 0 29 7.2 Yes 62 0.85 Yes 0 0 No -28 0.79 Yes 39 56.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6012808 - NM_000535 PMS2 0 . . . 6.54 82.63 33 7.74 Yes 69 -2.25 No 0 0 No -32 0.61 No 23 75.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108114393 + NM_000051 ATM 0 . . . 1.51 0 17 4.8 No 1 0.67 No 0 0 No -21 0.69 Yes 56 52.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68821500 + NM_004360 CDH1 0 . . . 1.51 80.65 28 5.38 No 3 0.81 Yes 0 0 No -27 0.78 Yes 50 87.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131946451 + NM_005732 RAD50 0 . . . 1.46 65.36 21 6.85 Yes 38 -3.14 No 0 0 No -20 0.84 Yes 51 52.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90967130 - NM_002485 NBN 0 . . . 3.46 79.04 79 9.69 Yes 22 0.62 No 0 0 No -20 0.3 No 21 62.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69076694 + NM_133509 RAD51B 0 . . . 5.21 81.62 27 5.2 No 67 1.37 Yes 0 0 No -26 0.76 Yes 51 43.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105192762 + NM_021930 RINT1 0 . . . 0.36 0 27 5.57 Yes 37 0.17 No 0 0 No -26 0.25 No 29 35.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1213755 + NM_000455 STK11 0 . . . 6.96 72 11 4.58 No 5 0.87 Yes 0 0 No -23 0.69 Yes 53 90.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215663677 - NM_000465 BARD1 0 . . . 3.6 85.02 14 4.47 No 4 1.2 Yes 0 0 No -56 0.48 No 45 66.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6014546 - NM_000535 PMS2 0 . . . 0.59 74.68 10 5.39 No 53 0.62 No 0 0 No -26 0.4 No 36 64.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152345199 - NM_005431 XRCC2 0 . . . 4.36 80.63 16 5.1 No 70 1.53 Yes 0 0 No -21 0.39 No 47 49.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84402038 - NM_139076 FAM175A 0 . . . 4.98 72.76 43 7.92 Yes 23 1.19 Yes 0 0 No -26 0.37 No 40 66.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56789162 + NM_058216 RAD51C 0 . . . 0.39 73.26 17 5.62 Yes 66 -1.85 No 0 0 No -25 0.37 No 51 81.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68902730 + NM_133509 RAD51B 0 . . . 3.84 91.21 33 5.82 Yes 18 0.61 No 0 0 No -37 0.67 Yes 40 81.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68513175 + NM_133509 RAD51B 0 . . . 4.44 73.4 38 6.59 Yes 56 -5.02 No 0 0 No -27 0.44 No 45 58.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94161640 - NM_005591 MRE11 0 . . . 0.09 73.9 34 4.98 No 62 0.57 No 0 0 No -22 0.51 No 49 84.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190660337 + NM_000534 PMS1 0 . . . 2.44 61.52 18 4.9 No 57 2.13 Yes 0 0 No -26 0.68 Yes 41 46.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68543857 + NM_133509 RAD51B 0 . . . 3.09 62.81 28 5.48 No 76 -3.63 No 0 0 No -23 0.46 No 41 62.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47764079 + NM_000251 MSH2 0 . . . 4.57 82.48 15 5.54 No 17 1.27 Yes 0 0 No -28 0.72 Yes 41 95.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108176904 + NM_000051 ATM 0 . . . 6.26 78.13 45 6.96 Yes 54 0.26 No 0 0 No -27 0.47 No 42 62.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215594453 - NM_000465 BARD1 0 . . . 4.01 73.57 16 5.09 No 16 -3.07 No 0 0 No -27 0.74 Yes 46 58.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68565686 + NM_133509 RAD51B 0 . . . 4.11 0 21 7.43 Yes 9 -0.57 No 0 0 No -20 0.84 Yes 32 48.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68630870 + NM_133509 RAD51B 0 . . . 2.51 0 23 5.24 No 8 0.9 Yes 0 0 No -23 0.47 No 54 62.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68666177 + NM_133509 RAD51B 0 . . . 4.94 73.24 19 6.03 Yes 46 1.19 Yes 0 0 No -32 0.69 Yes 39 77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131895728 + NM_005732 RAD50 0 . . . 4.56 79.15 34 6.32 Yes 75 0.13 No 0 0 No -58 0.65 No 48 85.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41274471 - NM_007294 BRCA1 0 . . . 3.6 0 22 3.92 No 19 1.09 Yes 0 0 No -21 0.64 No 39 53.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105185570 + NM_021930 RINT1 0 . . . 4.61 73.53 11 4.58 No 43 1.13 Yes 0 0 No -21 0.28 No 43 69.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68614372 + NM_133509 RAD51B 0 . . . 3.78 75.39 19 4.8 No 56 1.09 Yes 0 0 No -16 0.37 No 51 74.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108204246 + NM_000051 ATM 0 . . . 3.5 77.82 13 4.36 No 38 0.07 No 0 0 No -37 0.36 No 52 73.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37059280 + NM_000249 MLH1 0 . . . 5.18 68.58 25 5.67 Yes 6 0.22 No 0 0 No -24 0.77 Yes 39 52.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69109631 + NM_133509 RAD51B 0 . . . 1.81 74.54 37 5.79 Yes 46 0.84 Yes 0 0 No -36 0.44 No 42 59.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94189491 - NM_005591 MRE11 0 . . . 2.87 78.86 34 7.63 Yes 23 0.52 No 0 0 No -33 0.74 Yes 50 65.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59926344 - NM_032043 BRIP1 0 . . . 6.72 84.7 29 7.46 Yes 2 0.68 No 0 0 No -23 0.48 No 43 85.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108118031 + NM_000051 ATM 0 . . . 5.19 73.48 15 5.57 Yes 6 0.92 Yes 0 0 No -28 0.29 No 33 59.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33435260 - NM_002878 RAD51D 0 . . . 1.04 83 55 7.33 Yes 39 0.95 Yes 0 0 No -27 0.84 Yes 19 91.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108112020 + NM_000051 ATM 0 . . . 6.06 84.22 24 5.67 Yes 26 1 Yes 0 0 No -23 0.92 Yes 32 59.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69044415 + NM_133509 RAD51B 0 . . . 8.31 84.36 32 6 Yes 71 0.64 No 0 0 No -31 0.78 Yes 44 66.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37051861 + NM_000249 MLH1 0 . . . 5.93 75.87 42 6.69 Yes 57 1.13 Yes 0 0 No -41 0.34 No 48 52.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69060221 + NM_133509 RAD51B 0 . . . 7.31 83.51 18 5.53 No 8 0.41 No 0 0 No -23 0.78 Yes 50 94.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108186261 + NM_000051 ATM 0 . . . 1.42 70.81 40 6.39 Yes 75 -3.07 No 0 0 No -26 0.45 No 39 44.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47781368 + NM_000251 MSH2 0 . . . 4.27 81.5 59 8.54 Yes -3 0.27 No 0 0 No -38 0.5 No 46 55.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69150784 + NM_133509 RAD51B 0 . . . 1.69 73.89 29 6.32 Yes 52 0.59 No 0 0 No -28 0.83 Yes 54 76.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68683223 + NM_133509 RAD51B 0 . . . 0.76 60.44 27 5.2 No 19 0.48 No 0 0 No -26 0.7 Yes 39 45.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41263291 - NM_007294 BRCA1 0 . . . 7.1 81.45 14 4.47 No 23 1.59 Yes 0 0 No -41 0.76 Yes 45 77.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75505009 - NM_001040108 MLH3 0 . . . 0.02 62.82 34 5.39 No 76 0.16 No 0 0 No -26 0.55 No 51 30.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47767131 + NM_000251 MSH2 0 . . . 0.7 71.77 39 7.32 Yes 21 0.9 Yes 0 0 No -38 0.42 No 37 68.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41273456 - NM_007294 BRCA1 0 . . . 0.93 67.3 56 8.74 Yes 23 1.6 Yes 0 0 No -26 0.27 No 40 75.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47700388 + NM_000251 MSH2 0 . . . 1.17 67.3 20 4.55 No 41 1.48 Yes 0 0 No -51 0.54 No 40 70.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69043247 + NM_133509 RAD51B 0 . . . 1.57 64.73 16 4.81 No 38 0.27 No 0 0 No -20 0.85 Yes 50 62.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90966104 - NM_002485 NBN 0 . . . 2.71 76.43 26 5.14 No 70 -6.2 No 0 0 No -31 0.37 No 54 29.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84397804 - NM_139076 FAM175A 0 . . . 3.51 79.47 53 6.21 Yes 35 0.5 No 0 0 No -32 0.81 Yes 47 74.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69100680 + NM_133509 RAD51B 0 . . . 3.41 65.39 29 8.69 Yes 75 -5.8 No 0 0 No -28 0.98 Yes 42 60.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68499923 + NM_133509 RAD51B 0 . . . 1.1 64.15 18 4.88 No 20 0.33 No 0 0 No -17 0.67 Yes 38 55.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105180336 + NM_021930 RINT1 0 . . . 0.78 69.35 30 6 Yes 35 1.06 Yes 0 0 No -29 0.41 No 48 87.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7576853 - NM_000546 TP53 0 . . . 6.97 93.44 14 5 No -3 0 No 0 0 No -27 0.49 No 47 80.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108094965 + NM_000051 ATM 0 . . . 0.33 0 17 3.84 No 63 -5.78 No 0 0 No -37 0.82 Yes 56 45.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68530585 + NM_133509 RAD51B 0 . . . 7.22 85.45 12 6.37 Yes 5 0.59 No 0 0 No -23 0.69 Yes 41 50.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84386695 - NM_139076 FAM175A 0 . . . 2.74 70.85 16 4.47 No 18 0.98 Yes 0 0 No -20 0.6 No 40 80.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59835323 - NM_032043 BRIP1 0 . . . 1.1 0 24 5.46 No 62 1.16 Yes 0 0 No -23 0.84 Yes 41 13.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21980100 - NM_000077 CDKN2A 0 . . . 4.99 78.5 17 5.73 Yes 76 -4.51 No 0 0 No -23 0.64 No 46 93.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215601319 - NM_000465 BARD1 0 . . . 2.73 68.01 25 4.99 No 49 1.22 Yes 0 0 No -22 0.8 Yes 41 75.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68459585 + NM_133509 RAD51B 0 . . . 2.45 70.59 29 7.05 Yes 58 -5.85 No 0 0 No -28 0.88 Yes 51 71.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68608246 + NM_133509 RAD51B 0 . . . 2.11 73.11 27 4.83 No 65 -4.91 No 0 0 No -26 0.62 No 49 45.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807437 + NM_004360 CDH1 0 . . . 5.92 82.31 29 5.9 Yes 60 1.08 Yes 0 0 No -28 0.7 Yes 55 48.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41000100 + NM_001164269 RAD51 0 . . . 2.24 80.12 10 4.69 No 7 1.16 Yes 0 0 No -48 0.54 No 51 81.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59775602 - NM_032043 BRIP1 0 . . . 2.4 73.37 15 4.76 No 8 0.56 No 0 0 No -48 0.43 No 46 82.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108167337 + NM_000051 ATM 0 . . . 5.7 56.17 36 5.98 Yes 45 1.53 Yes 0 0 No -24 0.66 No 13 54.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29119769 - NM_001005735 CHEK2 0 . . . 4.66 80.12 20 5.54 No 8 1.2 Yes 0 0 No -29 0.66 No 50 90.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59813518 - NM_032043 BRIP1 0 . . . 1.73 86.92 25 5.2 No 11 1.41 Yes 0 0 No -24 0.59 No 47 91.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41025487 + NM_001164269 RAD51 0 . . . 4.16 69.06 41 4.94 No 57 -2.72 No 0 0 No -28 0.53 No 47 97.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190710713 + NM_000534 PMS1 0 . . . 2.74 66.09 17 4.68 No 23 1.56 Yes 0 0 No -29 0.45 No 45 59.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68563718 + NM_133509 RAD51B 0 . . . 3.01 71.58 26 5 No -3 0.87 Yes 0 0 No -25 0.71 Yes 51 47.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68564263 + NM_133509 RAD51B 0 . . . 4.85 86.73 18 7 Yes 0 0.72 No 0 0 No -17 0.47 No 46 42.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47717048 + NM_000251 MSH2 0 . . . 3.91 68.57 21 5.49 No 10 -2.61 No 0 0 No -20 0.45 No 48 74.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131924081 + NM_005732 RAD50 0 . . . 2.32 70.43 31 5.57 Yes -2 0.29 No 0 0 No -24 0.78 Yes 51 63.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6043550 - NM_000535 PMS2 0 . . . 2.29 75.02 34 5.15 No 33 1.09 Yes 0 0 No -28 0.84 Yes 35 60.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68484408 + NM_133509 RAD51B 0 . . . 4.99 62.46 19 4.8 No 28 0.04 No 0 0 No -18 0.76 Yes 51 56.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32895130 + NM_000059 BRCA2 0 . . . 3.76 71.78 22 4.07 No 62 1.18 Yes 0 0 No -26 0.59 No 41 82.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41008903 + NM_001164269 RAD51 0 . . . 5.01 84.17 31 5.93 Yes 63 1.38 Yes 0 0 No -30 0.71 Yes 17 63.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89701224 + NM_000314 PTEN 0 . . . 4.59 59.14 22 5.81 Yes 1 0.31 No 0 0 No -21 0.85 Yes 34 46.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104168874 - NM_001100119 XRCC3 0 . . . 2.87 74.96 23 7.05 Yes 29 0.27 No 0 0 No -30 0.58 No 29 77.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47685907 + NM_000251 MSH2 0 . . . 5.92 82.31 13 5.28 No 58 1.17 Yes 0 0 No -21 0.72 Yes 55 48.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68785749 + NM_004360 CDH1 0 . . . 4.71 84.17 11 5 No 58 -2.11 No 0 0 No -24 0.28 No 44 65.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108110990 + NM_000051 ATM 0 . . . 8.32 89.05 18 5.39 No 8 1.06 Yes 0 0 No -22 0.54 No 50 72.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69021386 + NM_133509 RAD51B 0 . . . 4.57 69.56 26 4.95 No -3 0.44 No 0 0 No -26 0.62 No 46 57.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108196392 + NM_000051 ATM 0 . . . 1.12 70.95 20 5 No 72 1.1 Yes 0 0 No -56 0.39 No 42 29.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68973961 + NM_133509 RAD51B 0 . . . 3.52 0 32 7.21 Yes 21 1.75 Yes 0 0 No -31 0.76 Yes 37 52.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108109580 + NM_000051 ATM 0 . . . 5.56 77.54 22 5.29 No -1 0.96 Yes 0 0 No -49 0.74 Yes 44 72.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69135003 + NM_133509 RAD51B 0 . . . 0.19 0 23 5.38 No 10 -1.81 No 0 0 No -22 0.79 Yes 51 55.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108160491 + NM_000051 ATM 0 . . . 3.04 82.26 26 6.32 Yes 60 0.3 No 0 0 No -26 0.5 No 41 86.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37068999 + NM_000249 MLH1 0 . . . 9.93 95.47 38 6.55 Yes 61 1 Yes 0 0 No -32 0.43 No 47 93.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68802191 + NM_133509 RAD51B 0 . . . 7.84 86.54 16 4.58 No 4 1.15 Yes 0 0 No -22 0.57 No 46 69.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68615736 + NM_133509 RAD51B 0 . . . 4.99 81.38 18 5.39 No 0 0.07 No 0 0 No -17 0.57 No 43 79.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68416378 + NM_133509 RAD51B 0 . . . 2.86 86.16 29 6.38 Yes 48 1.35 Yes 0 0 No -28 0.41 No 45 57.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23624610 - NM_024675 PALB2 0 . . . 4.27 73.44 17 4.76 No 60 1.41 Yes 0 0 No -60 0.39 No 53 75.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68864688 + NM_004360 CDH1 0 . . . 1.96 0 23 5.38 No 52 0.21 No 0 0 No -22 0.7 Yes 53 36.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68770554 + NM_133509 RAD51B 0 . . . 3.88 74.9 18 3.63 No 63 0.4 No 0 0 No -23 0.6 No 48 75.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215669235 - NM_000465 BARD1 0 . . . 2.44 79.45 26 4.73 No 27 -3.55 No 0 0 No -25 0.94 Yes 51 45.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32908032 + NM_000059 BRCA2 0 . . . 5.75 73.39 14 6.52 Yes 15 1.04 Yes 0 0 No -29 0.54 No 43 61.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68431083 + NM_133509 RAD51B 0 . . . 2.84 78.8 25 5.39 No 56 -4.44 No 0 0 No -22 0.77 Yes 43 45.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41218559 - NM_007294 BRCA1 0 . . . 1.77 74.23 16 4.69 No 53 0.69 No 0 0 No -58 0.75 Yes 42 33.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108100649 + NM_000051 ATM 0 . . . 0.97 71.28 50 8.42 Yes 64 1.37 Yes 0 0 No -25 0.31 No 45 78.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68323939 + NM_133509 RAD51B 0 . . . 3.81 0 26 6.86 Yes 4 0.25 No 0 0 No -25 0.82 Yes 39 41.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68843114 + NM_133509 RAD51B 0 . . . 2.93 73.06 12 4.68 No 32 0.32 No 0 0 No -41 0.43 No 52 43.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47786562 + NM_000251 MSH2 0 . . . 7.6 87.11 18 3.7 No 17 1.02 Yes 0 0 No -17 0.73 Yes 41 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59871295 - NM_032043 BRIP1 0 . . . 2.83 65.52 21 4.34 No -4 0.01 No 0 0 No -27 0.43 No 40 71.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68898733 + NM_133509 RAD51B 0 . . . 0.8 68.79 19 4.79 No 43 0.89 Yes 0 0 No -18 0.68 Yes 37 66.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47731436 + NM_000251 MSH2 0 . . . 8.61 87.05 18 4.5 No 12 0.71 No 0 0 No -28 0.69 Yes 46 87.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108204991 + NM_000051 ATM 0 . . . 2.15 66.99 27 5.2 No 32 0.15 No 0 0 No -26 0.72 Yes 18 27.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90982231 - NM_002485 NBN 0 . . . 0.42 0 38 6.47 Yes 23 1.63 Yes 0 0 No -37 0.59 No 40 76.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108186967 + NM_000051 ATM 0 . . . 6.85 90.79 14 5.45 No 68 0.7 No 0 0 No -24 0.72 Yes 45 52.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104170717 - NM_001100119 XRCC3 0 . . . 0.76 71.8 24 5.69 Yes 45 0.54 No 0 0 No -23 0.65 No 55 40.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215595041 - NM_000465 BARD1 0 . . . 2.09 0 27 5.33 No 42 0.53 No 29 0.85 Yes -26 0.88 Yes 16 51.07 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 7578498 - NM_000546 TP53 0 . . . 4.96 81.45 29 5.87 Yes 30 0.59 No 0 0 No -28 0.7 Yes 45 33.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68890646 + NM_133509 RAD51B 0 . . . 3.68 76.4 34 5.8 Yes 7 1.07 Yes 0 0 No -33 0.44 No 35 53.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152373659 - NM_005431 XRCC2 0 . . . 3.04 77.79 23 3.66 No 30 1.11 Yes 0 0 No -25 0.5 No 45 72.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41229075 - NM_007294 BRCA1 0 . . . 3.46 82.68 22 5.29 No 45 2.01 Yes 0 0 No -21 0.35 No 13 61.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94189911 - NM_005591 MRE11 0 . . . 4.55 82.78 19 4.61 No 48 -2.03 No 0 0 No -22 0.8 Yes 54 51.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59830281 - NM_032043 BRIP1 0 . . . 0.44 69.82 11 5.39 No 69 0.05 No 0 0 No -19 0.33 No 58 17.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68821754 + NM_004360 CDH1 0 . . . 3.99 0 26 4.01 No 15 1.5 Yes 0 0 No -25 0.65 No 43 95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68908390 + NM_133509 RAD51B 0 . . . 0.13 74.25 16 5.19 No 2 0.39 No 0 0 No -28 0.72 Yes 46 57.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68522054 + NM_133509 RAD51B 0 . . . 2.39 83.48 35 6.4 Yes 32 0.44 No 0 0 No -34 0.9 Yes 11 32.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41204180 - NM_007294 BRCA1 0 . . . 4.25 78.22 19 3.54 No 34 0.97 Yes 0 0 No -25 0.59 No 51 33.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59839942 - NM_032043 BRIP1 0 . . . 9.59 85.45 27 5.61 Yes 49 0.55 No 0 0 No -26 0.79 Yes 36 71.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68681042 + NM_133509 RAD51B 0 . . . 1.2 62.93 17 4.8 No 1 0.24 No 0 0 No -37 0.66 No 57 47.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75519865 - NM_001040108 MLH3 0 . . . 2.15 71.49 13 5.3 No 38 0.8 Yes 0 0 No -22 0.86 Yes 51 75.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47691008 + NM_000251 MSH2 0 . . . 1.78 66.76 19 4.85 No 64 0.58 No 0 0 No -27 0.66 No 42 76.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108211502 + NM_000051 ATM 0 . . . 1.55 83.61 13 5.48 No 72 0.49 No 0 0 No -23 0.38 No 48 71.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68886112 + NM_133509 RAD51B 0 . . . 6.43 80.34 22 5.29 No 16 0.45 No 0 0 No -21 0.9 Yes 46 75.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68626090 + NM_133509 RAD51B 0 . . . 0.09 74.68 18 6.51 Yes 59 0.55 No 0 0 No -25 0.49 No 54 67.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68762857 + NM_133509 RAD51B 0 . . . 4.64 71.51 9 3.87 No 55 0.86 Yes 0 0 No -25 0.58 No 41 66.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40989654 + NM_001164269 RAD51 0 . . . 6.65 78.48 29 6.48 Yes 32 0.64 No 0 0 No -28 0.89 Yes 49 87.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84389263 - NM_139076 FAM175A 0 . . . 2 80.34 17 4.8 No 35 1.23 Yes 0 0 No -24 0.37 No 23 78.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89684866 + NM_000314 PTEN 0 . . . 7.65 85.49 18 4.99 No -3 0.09 No 0 0 No -28 0.68 Yes 43 71.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23642127 - NM_024675 PALB2 0 . . . 1.51 69.55 22 4.14 No 63 1.2 Yes 0 0 No -21 0.7 Yes 49 74.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69096616 + NM_133509 RAD51B 0 . . . 1.53 73.65 34 6.32 Yes 3 0.44 No 0 0 No -30 0.62 No 47 63.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6049479 - NM_000535 PMS2 0 . . . 2.52 84.22 21 4.58 No 33 0.86 Yes 0 0 No -28 0.53 No 43 39.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23629234 - NM_024675 PALB2 0 . . . 7.62 76.61 43 6.86 Yes 29 -0.46 No 0 0 No -30 0.38 No 42 87.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108120974 + NM_000051 ATM 0 . . . 5.66 86.2 37 6.13 Yes 52 1.44 Yes 0 0 No -34 0.58 No 49 92.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68872439 + NM_133509 RAD51B 0 . . . 7.86 83.02 26 5.75 Yes 74 1.01 Yes 0 0 No -24 0.41 No 35 57.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108161833 + NM_000051 ATM 0 . . . 0.16 0 58 8.36 Yes 47 1.15 Yes 0 0 No -25 0.42 No 52 40.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108127290 + NM_000051 ATM 0 . . . 0.39 62.12 16 5.88 Yes 42 0.56 No 0 0 No -29 0.82 Yes 16 73.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89705719 + NM_000314 PTEN 0 . . . 3.2 66.67 21 5.01 No 33 -3.34 No 0 0 No -20 0.8 Yes 55 52.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68828821 + NM_133509 RAD51B 0 . . . 4.57 80.43 30 9.93 Yes 8 1.09 Yes 0 0 No -29 0.87 Yes 50 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41008334 + NM_001164269 RAD51 0 . . . 3.01 79.01 26 7.48 Yes 74 0.44 No 0 0 No -25 0.79 Yes 45 81.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190672489 + NM_000534 PMS1 0 . . . 0.35 69.63 32 5.74 Yes 36 2.3 Yes 0 0 No -28 0.37 No 22 23.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108114474 + NM_000051 ATM 0 . . . 2.28 78.75 25 5.91 Yes 31 0.98 Yes 0 0 No -24 0.5 No 49 71.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32914752 + NM_000059 BRCA2 0 . . . 1.21 81.18 38 6.56 Yes 42 -5.24 No 0 0 No -29 0.5 No 51 58.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29127964 - NM_001005735 CHEK2 0 . . . 1.19 69.84 30 7.44 Yes 70 -4.56 No 0 0 No -29 0.96 Yes 51 66.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215617687 - NM_000465 BARD1 0 . . . 4.6 82.25 18 5.82 Yes 25 0.63 No 0 0 No -27 0.67 Yes 33 50.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68909943 + NM_133509 RAD51B 0 . . . 8.02 80.01 22 6.24 Yes 11 0.2 No 0 0 No -21 0.9 Yes 47 73.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68839871 + NM_004360 CDH1 0 . . . 1.81 83.86 31 5.73 Yes 42 -2.19 No 0 0 No -30 0.78 Yes 30 83.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90984643 - NM_002485 NBN 0 . . . 3.14 72.33 15 4.58 No 18 1.78 Yes 0 0 No -38 0.76 Yes 40 95.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69086979 + NM_133509 RAD51B 0 . . . 1.8 80.1 74 10.48 Yes 51 -4.67 No 0 0 No -33 0.59 No 55 52.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47683347 + NM_000251 MSH2 0 . . . 7.97 83.05 9 4.69 No 33 0.76 No 0 0 No -22 0.62 No 44 73.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41005121 + NM_001164269 RAD51 0 . . . 3.75 84.95 19 4.79 No 56 1.37 Yes 0 0 No -18 0.74 Yes 44 27.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215636445 - NM_000465 BARD1 0 . . . 2.74 0 16 4.69 No 74 -5.12 No 0 0 No -15 0.41 No 41 81.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68379770 + NM_133509 RAD51B 0 . . . 5.96 75.07 21 5.3 No 8 1.82 Yes 0 0 No -33 0.46 No 50 86.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23613137 - NM_024675 PALB2 0 . . . 5.48 75.3 14 4.47 No 44 -2.89 No 0 0 No -31 0.81 Yes 52 47.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59790098 - NM_032043 BRIP1 0 . . . 2.45 79.05 27 5.5 No 7 1.16 Yes 0 0 No -26 0.84 Yes 51 74.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68825535 + NM_004360 CDH1 0 . . . 2.49 79.24 25 4.85 No 32 1.04 Yes 0 0 No -24 0.88 Yes 26 76.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108117090 + NM_000051 ATM 0 . . . 0.1 80 24 6 Yes 64 -5.76 No 0 0 No -23 0.79 Yes 48 80.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56809210 + NM_058216 RAD51C 0 . . . 4.54 75.94 17 4.35 No 7 1.43 Yes 0 0 No -22 0.65 No 40 80.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108231357 + NM_000051 ATM 0 . . . 0.57 70.52 37 6 Yes 18 0.24 No 0 0 No -36 0.62 No 44 60.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41003344 + NM_001164269 RAD51 0 . . . 1.93 74.09 15 5 No 43 0.47 No 0 0 No -20 0.31 No 44 75.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131982163 + NM_005732 RAD50 0 . . . 4.3 75.37 25 5.29 No 23 1.05 Yes 0 0 No -22 0.36 No 47 87.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47723990 + NM_000251 MSH2 0 . . . 9.17 79.24 18 4.9 No 10 1.28 Yes 0 0 No -22 0.61 No 48 85.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68780959 + NM_004360 CDH1 0 . . . 5.58 82.18 33 5.92 Yes 3 1.71 Yes 0 0 No -28 0.58 No 49 78.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215635402 - NM_000465 BARD1 0 . . . 2.48 79.4 15 5.88 Yes 16 0.81 Yes 0 0 No -20 0.64 No 42 65.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215641458 - NM_000465 BARD1 0 . . . 4.78 74.15 12 4.9 No 49 0.91 Yes 0 0 No -24 0.7 Yes 41 54.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68479887 + NM_133509 RAD51B 0 . . . 6 75.52 48 6.53 Yes 32 0.6 No 0 0 No -47 0.49 No 18 54.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071331 + NM_133509 RAD51B 0 . . . 1.4 0 29 5.96 Yes 4 0 No 0 0 No -28 0.89 Yes 54 62.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108217057 + NM_000051 ATM 0 . . . 5.77 76.6 16 4.69 No 68 1.4 Yes 0 0 No -33 0.44 No 52 43.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190732848 + NM_000534 PMS1 0 . . . 5.54 80.06 21 5.17 No 48 0.61 No 0 0 No -23 0.79 Yes 50 48.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460029 + NM_133509 RAD51B 0 . . . 4.76 84.4 22 3.88 No 13 0.81 Yes 0 0 No -18 0.47 No 45 66.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47721620 + NM_000251 MSH2 0 . . . 2.61 79.07 17 6.08 Yes 16 1.41 Yes 0 0 No -16 0.75 Yes 42 86.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69016654 + NM_133509 RAD51B 0 . . . 0.99 71.31 15 4.42 No 20 2.3 Yes 0 0 No -30 0.75 Yes 38 81.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32899174 + NM_000059 BRCA2 0 . . . 2.68 77.93 21 4.8 No 22 -3.23 No 23 0.86 Yes -20 0.85 Yes 46 37.95 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 69015299 + NM_133509 RAD51B 0 . . . 3.69 67.5 37 5.45 No 75 -1.32 No 0 0 No -31 0.38 No 52 65.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68787083 + NM_133509 RAD51B 0 . . . 3.36 72.14 28 5.48 No 13 1.18 Yes 0 0 No -57 0.52 No 45 64.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68352734 + NM_133509 RAD51B 0 . . . 5.08 84.39 25 5 No 63 0.37 No 0 0 No -25 0.7 Yes 53 65.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69130530 + NM_133509 RAD51B 0 . . . 0.07 0 21 5.17 No 28 1.26 Yes 0 0 No -25 0.73 Yes 30 58.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59791392 - NM_032043 BRIP1 0 . . . 0.82 71.24 20 5.92 Yes 39 1.74 Yes 0 0 No -26 0.43 No 48 54.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105172704 + NM_021930 RINT1 0 . . . 3.03 65.72 51 8.18 Yes 7 0.38 No 0 0 No -23 0.86 Yes 51 83.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108211919 + NM_000051 ATM 0 . . . 2.61 68.56 21 6.06 Yes 62 1.63 Yes 0 0 No -20 0.45 No 46 85.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69075307 + NM_133509 RAD51B 0 . . . 0.61 79.75 16 4.13 No 67 1.36 Yes 0 0 No -25 0.87 Yes 53 72.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56793023 + NM_058216 RAD51C 0 . . . 6.21 76.71 23 5.29 No 35 1.8 Yes 0 0 No -22 0.69 Yes 50 78.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47721770 + NM_000251 MSH2 0 . . . 2.15 71.85 15 4.58 No 75 0.39 No 0 0 No -23 0.77 Yes 47 26.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59910838 - NM_032043 BRIP1 0 . . . 3.53 82.05 18 6.78 Yes 34 1.23 Yes 0 0 No -41 0.33 No 24 76.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69127504 + NM_133509 RAD51B 0 . . . 0.62 64.45 29 5.39 No -1 0.28 No 0 0 No -26 0.57 No 59 41.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131976859 + NM_005732 RAD50 0 . . . 1.22 0 31 6.4 Yes 0 0.07 No 0 0 No -34 0.57 No 58 21.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90995559 - NM_002485 NBN 0 . . . 1.65 88.98 21 4.8 No 76 1.45 Yes 0 0 No -20 0.87 Yes 50 63.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59762161 - NM_032043 BRIP1 0 . . . 2.44 80.22 21 5.74 Yes 66 -4.9 No 0 0 No -20 0.75 Yes 43 59.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68474947 + NM_133509 RAD51B 0 . . . 1.52 68.98 22 3.44 No 27 0.84 Yes 0 0 No -21 0.97 Yes 31 73.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68898489 + NM_133509 RAD51B 0 . . . 3.94 70.18 21 4.8 No 76 1.02 Yes 0 0 No -20 0.87 Yes 23 76.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59792757 - NM_032043 BRIP1 0 . . . 2.02 74.42 33 4.82 No 7 0.23 No 0 0 No -32 0.62 No 41 83.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68465377 + NM_133509 RAD51B 0 . . . 4.49 84.44 15 5.03 No 4 0.28 No 0 0 No -26 0.75 Yes 47 58.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6040458 - NM_000535 PMS2 0 . . . 3.6 85.02 15 5.92 Yes 4 1.05 Yes 0 0 No -46 0.66 Yes 54 74.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84392865 - NM_139076 FAM175A 0 . . . 2.95 71.9 39 7.53 Yes 65 0.04 No 0 0 No -38 0.98 Yes 49 42.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89732022 + NM_000314 PTEN 0 . . . 2.9 78.85 17 6.48 Yes 33 1.32 Yes 0 0 No -16 0.71 Yes 47 44.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69007127 + NM_133509 RAD51B 0 . . . 3.37 78.16 29 5.48 No 21 -2.13 No 0 0 No -28 0.91 Yes 50 62.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33426422 - NM_002878 RAD51D 0 . . . 2.6 81.69 27 5.16 No 60 0.25 No 0 0 No -54 0.57 No 45 58.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105200347 + NM_021930 RINT1 0 . . . 11.3 92.98 20 4.73 No 6 0.78 Yes 0 0 No -19 0.62 No 52 74.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131927606 + NM_005732 RAD50 0 . . . 0.03 56.59 61 7.5 Yes 49 0.01 No 0 0 No -22 0.64 No 61 12.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94158820 - NM_005591 MRE11 0 . . . 7.07 72.37 17 3.22 No 24 1.77 Yes 0 0 No -20 0.6 No 34 89.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69072226 + NM_133509 RAD51B 0 . . . 0.96 68.55 47 6.64 Yes 74 0.85 Yes 0 0 No -35 0.4 No 46 35.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59830284 - NM_032043 BRIP1 0 . . . 0.11 64.53 29 5.88 Yes 74 0.33 No 0 0 No -28 0.92 Yes 24 20.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7580600 - NM_000546 TP53 0 . . . 8.36 85.78 16 4.95 No 54 -3.3 No 0 0 No -20 0.79 Yes 47 38.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47775733 + NM_000251 MSH2 0 . . . 3.33 73.98 22 6.85 Yes 46 1.47 Yes 0 0 No -21 0.96 Yes 38 37.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152362559 - NM_005431 XRCC2 0 . . . 6.02 86.03 24 6.31 Yes 73 -3.47 No 0 0 No -23 0.77 Yes 34 40.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75516300 - NM_001040108 MLH3 0 . . . 0.82 64.08 56 8.4 Yes 65 1.61 Yes 0 0 No -36 0.7 Yes 39 55.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108123797 + NM_000051 ATM 0 . . . 1.54 86.51 23 5.04 No 58 -3.88 No 0 0 No -22 0.7 Yes 42 52.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68303645 + NM_133509 RAD51B 0 . . . 2.74 79.72 28 5.39 No 64 0.49 No 0 0 No -27 0.87 Yes 50 57.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90985613 - NM_002485 NBN 0 . . . 2.77 73.01 23 5.83 Yes 52 0.27 No 0 0 No -22 0.89 Yes 42 92.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89641623 + NM_000314 PTEN 0 . . . 7.62 82.12 47 6.89 Yes 20 0.58 No 0 0 No -19 0.48 No 38 53.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190664023 + NM_000534 PMS1 0 . . . 2.1 76.58 21 5.92 Yes 20 0.95 Yes 0 0 No -20 0.44 No 48 66.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68688261 + NM_133509 RAD51B 0 . . . 0.11 57.55 15 4.76 No 19 1 Yes 0 0 No -22 0.44 No 39 51.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40986793 + NM_001164269 RAD51 0 . . . 2.32 83.91 21 5 No 31 0.99 Yes 0 0 No -21 0.59 No 43 37.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69087699 + NM_133509 RAD51B 0 . . . 4.89 79.05 28 6.48 Yes 31 0.73 No 0 0 No -27 0.76 Yes 47 88.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21992733 - NM_000077 CDKN2A 0 . . . 4 78.2 29 5.29 No 45 0.38 No 0 0 No -26 0.51 No 33 52.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21992335 - NM_000077 CDKN2A 0 . . . 0.97 56.91 23 3.84 No 22 -2.51 No 0 0 No -22 0.52 No 43 28.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69102425 + NM_133509 RAD51B 0 . . . 3.57 70.54 28 6.26 Yes 46 1.01 Yes 0 0 No -27 0.74 Yes 42 51.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41020970 + NM_001164269 RAD51 0 . . . 1.82 0 17 4.8 No 74 0.7 No 0 0 No -31 0.64 No 47 34.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48012992 + NM_000179 MSH6 0 . . . 2.74 86.25 13 5.16 No 27 -1.84 No 0 0 No -21 0.56 No 43 73.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68685715 + NM_133509 RAD51B 0 . . . 1.54 59.85 23 8.15 Yes 1 0.47 No 0 0 No -29 0.33 No 27 58.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84393882 - NM_139076 FAM175A 0 . . . 2.36 59.8 32 6.16 Yes 52 0.8 Yes 0 0 No -31 0.62 No 12 31.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215675045 - NM_000465 BARD1 0 . . . 1.59 62.98 19 5 No 42 -4.73 No 0 0 No -24 0.59 No 29 73.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68838717 + NM_133509 RAD51B 0 . . . 1.15 64.25 16 7.95 Yes 73 -5.35 No 0 0 No -33 0.61 No 45 84.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68290993 + NM_133509 RAD51B 0 . . . 8.52 81.72 39 6.16 Yes 66 -2.09 No 0 0 No -34 0.51 No 37 70.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21974458 - NM_000077 CDKN2A 0 . . . 0.81 72.21 36 7.07 Yes 65 0.35 No 0 0 No -35 0.76 Yes 54 32.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48017948 + NM_000179 MSH6 0 . . . 5.24 62.85 36 4.53 No 7 0.92 Yes 0 0 No -36 0.75 Yes 51 72.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131899690 + NM_005732 RAD50 0 . . . 0.19 0 37 5.97 Yes 28 0.96 Yes 0 0 No -24 0.55 No 30 52.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68866350 + NM_004360 CDH1 0 . . . 3.82 72.85 29 7.35 Yes 67 -4.96 No 0 0 No -28 0.92 Yes 43 53.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68826676 + NM_133509 RAD51B 0 . . . 3.88 0 38 5.92 Yes 9 -2.12 No 0 0 No -26 0.69 Yes 50 57.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41271424 - NM_007294 BRCA1 0 . . . 2.09 67.35 12 4.24 No 62 -1.57 No 0 0 No -19 0.61 No 64 18.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68869161 + NM_004360 CDH1 0 . . . 0.83 67.96 25 6.48 Yes 12 0.08 No 0 0 No -24 0.92 Yes 39 79.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7573229 - NM_000546 TP53 0 . . . 1.41 63.57 22 4.9 No 51 0.51 No 0 0 No -21 0.86 Yes 51 34.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152341923 - NM_005431 XRCC2 0 . . . 3.66 84.54 26 6.56 Yes 66 -4.66 No 0 0 No -30 0.38 No 45 94.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47690422 + NM_000251 MSH2 0 . . . 7.31 81.5 18 4.82 No 10 0.99 Yes 0 0 No -18 0.38 No 48 71.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68491901 + NM_133509 RAD51B 0 . . . 1.78 84.94 16 5.09 No 52 0.54 No 0 0 No -27 0.72 Yes 51 67.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215615627 - NM_000465 BARD1 0 . . . 4.81 77.04 23 5.1 No 37 -2.78 No 0 0 No -22 0.92 Yes 45 50.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68461984 + NM_133509 RAD51B 0 . . . 2.84 63.69 18 5.83 Yes 48 0.59 No 0 0 No -46 0.89 Yes 41 47.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69039193 + NM_133509 RAD51B 0 . . . 7.03 82.96 29 5.82 Yes 3 1.33 Yes 0 0 No -32 0.38 No 45 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69075391 + NM_133509 RAD51B 0 . . . 1.16 66.11 17 4.64 No 31 0.8 Yes 0 0 No -22 0.46 No 27 47.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41224909 - NM_007294 BRCA1 0 . . . 2.21 64.61 25 5.1 No 33 -2.02 No 0 0 No -24 0.89 Yes 49 25.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41019724 + NM_001164269 RAD51 0 . . . 0.27 0 28 5.39 No 72 -1.99 No 0 0 No -27 0.66 Yes 56 43.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131909320 + NM_005732 RAD50 0 . . . 2.76 0 29 5.39 No 49 1.11 Yes 0 0 No -23 0.37 No 17 49.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68640112 + NM_133509 RAD51B 0 . . . 4.17 71.22 23 5.08 No 32 1.19 Yes 0 0 No -22 0.7 Yes 26 90.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41215812 - NM_007294 BRCA1 0 . . . 2.67 72.72 15 4.58 No 58 0.79 Yes 0 0 No -28 0.71 Yes 47 40.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37063973 + NM_000249 MLH1 0 . . . 3.69 70.82 17 4.77 No 69 -3.03 No 0 0 No -22 0.66 No 42 40.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68824559 + NM_133509 RAD51B 0 . . . 9.49 83.07 15 4.6 No 73 -2.21 No 0 0 No -27 0.43 No 43 69.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41267662 - NM_007294 BRCA1 0 . . . 1.82 74.61 24 5.48 No -3 0.58 No 0 0 No -28 0.86 Yes 45 72.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190719772 + NM_000534 PMS1 0 . . . 1.02 0 28 5.19 No 0 0.59 No 0 0 No -28 0.9 Yes 23 63.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69019533 + NM_133509 RAD51B 0 . . . 5.88 80.5 91 7.61 Yes 30 0.5 No 0 0 No -58 0.34 No 28 91.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68557935 + NM_133509 RAD51B 0 . . . 1.5 67.39 20 5.1 No 12 -2.84 No 0 0 No -19 0.64 No 36 51.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68338604 + NM_133509 RAD51B 0 . . . 3.5 63.12 16 4.17 No 72 -4.78 No 0 0 No -23 0.5 No 56 34.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89635047 + NM_000314 PTEN 0 . . . 4.73 77.69 17 6.4 Yes 72 0.71 No 0 0 No -16 0.72 Yes 46 68.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89665495 + NM_000314 PTEN 0 . . . 3.68 70.85 17 5.83 Yes 23 1.59 Yes 0 0 No -35 0.24 No 45 70.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68557082 + NM_133509 RAD51B 0 . . . 5.87 81.49 47 6.78 Yes 33 0.57 No 0 0 No -26 0.72 Yes 39 56.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29105409 - NM_001005735 CHEK2 0 . . . 0.44 55.31 34 7.71 Yes 26 0.46 No 0 0 No -33 0.68 Yes 56 44.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131957490 + NM_005732 RAD50 0 . . . 9.59 86.2 19 5.65 Yes 37 1.16 Yes 0 0 No -27 0.71 Yes 47 81.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32939021 + NM_000059 BRCA2 0 . . . 8.06 82.57 15 5.39 No 6 1.29 Yes 0 0 No -28 0.21 No 34 69.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69015154 + NM_133509 RAD51B 0 . . . 2.07 70.37 26 5.95 Yes 51 0.75 No 0 0 No -25 0.73 Yes 44 57.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94173282 - NM_005591 MRE11 0 . . . 2.99 82.01 25 4.23 No 22 0.07 No 0 0 No -24 0.72 Yes 48 78.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37039175 + NM_000249 MLH1 0 . . . 3.91 71.21 19 4.43 No 66 -3.2 No 0 0 No -27 0.69 Yes 46 96.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56804884 + NM_058216 RAD51C 0 . . . 1.57 65.86 28 6.36 Yes 47 1.3 Yes 0 0 No -27 0.79 Yes 28 45.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59871235 - NM_032043 BRIP1 0 . . . 5.33 77.84 28 5.3 No 56 0.44 No 0 0 No -27 0.46 No 45 41.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68717188 + NM_133509 RAD51B 0 . . . 4.21 0 11 4.58 No 53 0.61 No 0 0 No -50 0.42 No 54 71.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108202819 + NM_000051 ATM 0 . . . 2.92 0 29 6.62 Yes 6 0.71 No 0 0 No -29 0.67 Yes 52 74.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69133330 + NM_133509 RAD51B 0 . . . 1.24 69.97 39 6.32 Yes 21 0.08 No 0 0 No -38 0.9 Yes 37 34.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68284644 + NM_133509 RAD51B 0 . . . 1.38 0 24 5 No 20 1.07 Yes 0 0 No -23 0.28 No 38 95.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41008823 + NM_001164269 RAD51 0 . . . 4.03 78.23 14 6 Yes 19 1.41 Yes 0 0 No -29 0.58 No 44 62.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47657590 + NM_000251 MSH2 0 . . . 0.4 52.37 15 4.58 No 63 1.39 Yes 0 0 No -51 0.59 No 38 73.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47700207 + NM_000251 MSH2 0 . . . 2.81 75.89 16 4.69 No -1 0.19 No 0 0 No -51 0.65 No 44 61.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108201989 + NM_000051 ATM 0 . . . 4.04 66.35 19 5.65 Yes 31 -1.9 No 0 0 No -22 0.52 No 48 51.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47678896 + NM_000251 MSH2 0 . . . 8.75 84.84 21 5.2 No 72 0.3 No 0 0 No -20 0.49 No 37 71.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6050252 - NM_000535 PMS2 0 . . . 4.04 62.27 28 5.4 No 12 0.61 No 0 0 No -27 0.74 Yes 38 39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108131137 + NM_000051 ATM 0 . . . 2.39 83.81 32 5.66 Yes 68 0.86 Yes 0 0 No -25 0.58 No 51 58.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215620213 - NM_000465 BARD1 0 . . . 1.5 80.3 40 7.66 Yes 59 0.83 Yes 0 0 No -39 0.78 Yes 51 41.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68512147 + NM_133509 RAD51B 0 . . . 5.8 73.58 26 5.38 No 42 0.78 Yes 0 0 No -25 0.91 Yes 47 76.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69057510 + NM_133509 RAD51B 0 . . . 3.48 85.04 32 4.65 No 74 1.6 Yes 0 0 No -28 0.39 No 43 56.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94149984 - NM_005591 MRE11 0 . . . 3.83 82.29 28 5.38 No 49 0.03 No 0 0 No -23 0.42 No 14 62.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131911734 + NM_005732 RAD50 0 . . . 7.78 85.32 22 6.24 Yes 41 0.67 No 0 0 No -19 0.72 Yes 41 51.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68952750 + NM_133509 RAD51B 0 . . . 7.44 83.02 26 6.45 Yes 6 0.31 No 0 0 No -25 0.61 No 39 96.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37081290 + NM_000249 MLH1 0 . . . 1.14 76.07 21 5.92 Yes 48 -2.32 No 0 0 No -20 0.82 Yes 41 57.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68981061 + NM_133509 RAD51B 0 . . . 2.61 66.47 38 6.1 Yes 69 0.37 No 0 0 No -33 0.13 No 50 40.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68658457 + NM_133509 RAD51B 0 . . . 7.36 81.46 19 4.76 No 48 0.3 No 0 0 No -25 0.51 No 47 56.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68809756 + NM_004360 CDH1 0 . . . 0.77 0 24 5.38 No 25 0 No 0 0 No -23 0.72 Yes 38 61.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59904310 - NM_032043 BRIP1 0 . . . 6.51 77.92 22 6.24 Yes 55 0.81 Yes 0 0 No -21 0.97 Yes 41 48.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40995129 + NM_001164269 RAD51 0 . . . 0.82 73.99 50 6.49 Yes 65 1.45 Yes 0 0 No -28 0.41 No 47 47.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215639099 - NM_000465 BARD1 0 . . . 0.91 77.98 25 5.96 Yes 61 1.36 Yes 0 0 No -31 0.55 No 48 66.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40990337 + NM_001164269 RAD51 0 . . . 4.86 83.2 22 6.09 Yes 39 1.89 Yes 0 0 No -38 0.61 No 19 40.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47647037 + NM_000251 MSH2 0 . . . 0.93 83.04 24 5.64 Yes 38 -2.34 No 0 0 No -32 0.74 Yes 47 47.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108116714 + NM_000051 ATM 0 . . . 1.2 65.95 16 6.14 Yes 22 -2.56 No 0 0 No -20 0.64 No 48 58.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29138376 - NM_001005735 CHEK2 0 . . . 11.52 87.11 31 6.08 Yes 68 1.83 Yes 0 0 No -52 0.69 Yes 44 67.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37071569 + NM_000249 MLH1 0 . . . 7.8 74.61 61 6.49 Yes 5 1.83 Yes 0 0 No -20 0.45 No 53 59.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6047887 - NM_000535 PMS2 0 . . . 3.63 68.17 38 6.23 Yes 23 0.56 No 0 0 No -32 0.76 Yes 35 68.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47671638 + NM_000251 MSH2 0 . . . 2.15 71.28 35 6.38 Yes 37 0.41 No 0 0 No -16 0.41 No 42 35.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37061397 + NM_000249 MLH1 0 . . . 3.6 85.02 21 5.37 No 4 1.05 Yes 0 0 No -27 0.44 No 54 74.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104177166 - NM_001100119 XRCC3 0 . . . 6.76 84.44 24 5.41 No 8 0.32 No 0 0 No -23 0.87 Yes 49 52.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190713660 + NM_000534 PMS1 0 . . . 0.22 62.66 17 5.77 Yes 46 0.62 No 0 0 No -26 0.6 No 46 67.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47793811 + NM_000251 MSH2 0 . . . 0.82 59.33 28 5.38 No 47 0.79 Yes 0 0 No -27 0.63 No 45 31.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68354908 + NM_133509 RAD51B 0 . . . 5.64 71.77 25 5.33 No 0 0.75 No 0 0 No -24 0.88 Yes 38 63.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89630691 + NM_000314 PTEN 0 . . . 0.45 83.11 16 5.27 No 53 0.77 Yes 0 0 No -24 0.72 Yes 55 31.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68511324 + NM_133509 RAD51B 0 . . . 3.96 0 16 4.41 No 8 0.77 Yes 0 0 No -28 0.79 Yes 50 72.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68351186 + NM_133509 RAD51B 0 . . . 2.5 65.33 27 5.71 Yes 0 -1.84 No 0 0 No -29 0.61 No 46 38.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849373 - NM_032043 BRIP1 0 . . . 3.37 62.07 20 6.07 Yes 22 1.66 Yes 0 0 No -25 0.52 No 36 80.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68653663 + NM_133509 RAD51B 0 . . . 0.14 68.19 17 4.65 No 18 -0.93 No 0 0 No -22 0.88 Yes 48 65.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94195214 - NM_005591 MRE11 0 . . . 2.51 81.96 48 6.52 Yes 40 1.09 Yes 0 0 No -47 0.45 No 18 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45797382 - NM_001048171 MUTYH 0 . . . 6.52 73.34 32 4.97 No 57 -2.32 No 0 0 No -54 0.36 No 43 37.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68978684 + NM_133509 RAD51B 0 . . . 6.93 81.51 20 4.89 No 5 1.42 Yes 0 0 No -19 0.47 No 53 67.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68865746 + NM_133509 RAD51B 0 . . . 1.13 69.56 31 6.23 Yes 72 -4.22 No 0 0 No -30 0.92 Yes 28 39.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23649740 - NM_024675 PALB2 0 . . . 0.38 0 45 7.13 Yes 66 -4.65 No 0 0 No -44 0.72 Yes 56 35.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29125588 - NM_001005735 CHEK2 0 . . . 7.91 83.64 30 5.74 Yes 16 -2.19 No 0 0 No -29 0.7 Yes 42 77.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68343229 + NM_133509 RAD51B 0 . . . 2.08 89.49 36 5.82 Yes 62 0.77 Yes 0 0 No -28 0.63 No 48 45.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68414488 + NM_133509 RAD51B 0 . . . 5.15 87.97 18 4.47 No 3 0.2 No 0 0 No -44 0.49 No 44 48.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668764 - NM_000465 BARD1 0 . . . 1.43 69.01 22 5.1 No 2 0.08 No 0 0 No -19 0.44 No 42 64.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68913537 + NM_133509 RAD51B 0 . . . 5.8 77.88 14 5.27 No 19 -2.06 No 0 0 No -22 0.68 Yes 44 82.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215615018 - NM_000465 BARD1 0 . . . 0.64 0 24 3.55 No 22 0.27 No 0 0 No -55 0.8 Yes 48 56.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68398732 + NM_133509 RAD51B 0 . . . 1.15 74.75 16 4.67 No 33 1.17 Yes 0 0 No -20 0.87 Yes 25 75.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68504199 + NM_133509 RAD51B 0 . . . 3.68 70.85 15 4 No 21 1.75 Yes 0 0 No -14 0.38 No 37 86.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1211567 + NM_000455 STK11 0 . . . 0.88 0 35 5.95 Yes 38 -1.07 No 0 0 No -34 0.89 Yes 41 36.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23652826 - NM_024675 PALB2 0 . . . 1.35 74.35 20 4.36 No 59 -1.18 No 0 0 No -19 0.83 Yes 52 39.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1225872 + NM_000455 STK11 0 . . . 4.13 76.95 24 5.29 No 10 -0.51 No 0 0 No -23 0.94 Yes 50 39.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56784558 + NM_058216 RAD51C 0 . . . 1.34 0 20 5.74 Yes 14 1 Yes 0 0 No -19 0.62 No 44 85.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47645857 + NM_000251 MSH2 0 . . . 0.9 69.11 35 6 Yes 24 1.37 Yes 0 0 No -33 0.81 Yes 46 29.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190675428 + NM_000534 PMS1 0 . . . 3.17 77.1 17 4.69 No 2 1.06 Yes 0 0 No -21 0.37 No 43 52.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84386608 - NM_139076 FAM175A 0 . . . 6.81 79.91 18 5.29 No 7 0.88 Yes 0 0 No -45 0.35 No 37 79.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68832778 + NM_133509 RAD51B 0 . . . 3.54 73.53 31 6.77 Yes 61 -2.21 No 0 0 No -30 0.73 Yes 39 45.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68774136 + NM_133509 RAD51B 0 . . . 0.02 0 50 7.07 Yes 34 -2.39 No 0 0 No -27 0.36 No 56 26.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68389643 + NM_133509 RAD51B 0 . . . 4.73 82.44 30 7.12 Yes 57 1.16 Yes 0 0 No -29 0.87 Yes 54 72.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68989847 + NM_133509 RAD51B 0 . . . 0.25 0 21 5.37 No 68 -1.06 No 0 0 No -20 0.76 Yes 33 83.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32918367 + NM_000059 BRCA2 0 . . . 0.7 74.77 21 5.94 Yes 70 0.52 No 0 0 No -20 0.83 Yes 37 80.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59819277 - NM_032043 BRIP1 0 . . . 3.01 66.54 48 6.09 Yes -3 1.34 Yes 0 0 No -30 0.34 No 61 39.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68806808 + NM_133509 RAD51B 0 . . . 0.88 78.02 20 4.57 No 48 -4.3 No 0 0 No -19 0.62 No 51 76.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215639765 - NM_000465 BARD1 0 . . . 1.15 61.82 20 3.69 No 33 1.39 Yes 0 0 No -24 0.83 Yes 15 34.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23643652 - NM_024675 PALB2 0 . . . 1.35 63.4 27 5.02 No 15 0.75 No 0 0 No -30 0.54 No 38 64.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108148941 + NM_000051 ATM 0 . . . 3.64 72.88 15 5.07 No 5 1.29 Yes 0 0 No -19 0.59 No 47 78.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69122164 + NM_133509 RAD51B 0 . . . 7.33 83.56 21 5.39 No 70 -4.07 No 0 0 No -20 0.59 No 51 52.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1209948 + NM_000455 STK11 0 . . . 2.41 70.67 30 4.32 No 5 1.45 Yes 0 0 No -23 0.5 No 45 43.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68752804 + NM_133509 RAD51B 0 . . . 9.42 88.99 13 4.36 No 43 1.25 Yes 0 0 No -21 0.41 No 49 69.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47763650 + NM_000251 MSH2 0 . . . 2.54 0 13 5 No 69 -2.56 No 0 0 No -50 0.74 Yes 39 83.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68396323 + NM_133509 RAD51B 0 . . . 0.16 73.22 25 4.79 No 29 0.62 No 0 0 No -24 0.33 No 29 67.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41253965 - NM_007294 BRCA1 0 . . . 3.63 72.94 22 5.48 No 59 0.13 No 0 0 No -52 0.59 No 43 42.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32905936 + NM_000059 BRCA2 0 . . . 3.61 78.04 30 5.3 No 58 -4.24 No 0 0 No -26 0.51 No 39 68.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41225441 - NM_007294 BRCA1 0 . . . 4.54 71.88 15 4.05 No 3 0.77 Yes 0 0 No -26 0.46 No 41 77.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215655932 - NM_000465 BARD1 0 . . . 7.85 84.45 26 5.29 No 55 0.58 No 0 0 No -25 0.7 Yes 36 56.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68449750 + NM_133509 RAD51B 0 . . . 3.6 75.1 33 7.56 Yes 72 -4.72 No 0 0 No -32 0.67 Yes 47 60.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68935894 + NM_133509 RAD51B 0 . . . 0.33 65.89 27 4.45 No 26 1.2 Yes 0 0 No -26 0.88 Yes 53 41.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94224875 - NM_005591 MRE11 0 . . . 4.5 65.57 45 6.74 Yes 9 0.84 Yes 0 0 No -24 0.54 No 43 53.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59903332 - NM_032043 BRIP1 0 . . . 0.64 76.39 14 7.27 Yes 48 0.9 Yes 0 0 No -28 0.24 No 54 21.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108199360 + NM_000051 ATM 0 . . . 2.18 64.73 30 5.66 Yes 74 1.3 Yes 0 0 No -29 0.83 Yes 39 67.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152351117 - NM_005431 XRCC2 0 . . . 3.31 85.02 23 5.38 No 4 1.05 Yes 0 0 No -22 0.64 No 54 69.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48014886 + NM_000179 MSH6 0 . . . 0.37 0 17 5.32 No 15 0.88 Yes 0 0 No -28 0.25 No 38 48.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108234105 + NM_000051 ATM 0 . . . 6.36 76.2 12 4.9 No 66 1.22 Yes 0 0 No -17 0.3 No 42 71.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108203259 + NM_000051 ATM 0 . . . 5.19 81.16 18 4.56 No 41 0.62 No 0 0 No -28 0.43 No 46 57.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68648083 + NM_133509 RAD51B 0 . . . 2.79 0 20 3.78 No 54 0.82 Yes 0 0 No -23 0.46 No 47 65.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89626252 + NM_000314 PTEN 0 . . . 3.4 68.04 13 5 No 44 0.31 No 0 0 No -18 0.44 No 50 90.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32935708 + NM_000059 BRCA2 0 . . . 2.12 71.12 28 5.39 No 6 0.06 No 0 0 No -45 0.63 No 46 92.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68598384 + NM_133509 RAD51B 0 . . . 3.35 82.05 19 4.24 No 15 0.06 No 0 0 No -40 0.8 Yes 53 52.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68371881 + NM_133509 RAD51B 0 . . . 2.99 78.29 37 5.69 Yes 43 0.97 Yes 0 0 No -30 0.69 Yes 46 73.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59808473 - NM_032043 BRIP1 0 . . . 12.05 91.54 27 7.55 Yes 9 0.5 No 0 0 No -26 0.86 Yes 48 76.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33438864 - NM_002878 RAD51D 0 . . . 4.53 71.74 23 3.73 No 70 0.44 No 0 0 No -22 0.67 Yes 52 45.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47658143 + NM_000251 MSH2 0 . . . 4.08 88.54 29 5.01 No 70 0.41 No 0 0 No -28 0.86 Yes 48 86.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69114982 + NM_133509 RAD51B 0 . . . 0.56 63.63 13 4.36 No 66 -5.57 No 0 0 No -42 0.58 No 46 90.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1207718 + NM_000455 STK11 0 . . . 2.66 70.11 11 5.57 Yes 54 0.38 No 0 0 No -24 0.93 Yes 48 74.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59909329 - NM_032043 BRIP1 0 . . . 1.2 63.99 40 6.15 Yes 69 1 Yes 0 0 No -27 0.59 No 42 58.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68719086 + NM_133509 RAD51B 0 . . . 1.42 68.74 45 7.1 Yes 47 -4.38 No 0 0 No -41 0.59 No 44 37.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68595932 + NM_133509 RAD51B 0 . . . 2.06 71.58 55 9.11 Yes 67 1.29 Yes 0 0 No -25 0.63 No 41 64.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59770786 - NM_032043 BRIP1 0 . . . 0.47 63.75 28 5.87 Yes 21 -3.7 No 0 0 No -27 0.63 No 44 82.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41023876 + NM_001164269 RAD51 0 . . . 2.63 73.79 14 4.47 No 4 0.79 Yes 0 0 No -28 0.34 No 41 86.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108213322 + NM_000051 ATM 0 . . . 5.58 83.54 25 5.35 No 1 0.46 No 0 0 No -24 0.62 No 40 62.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68623585 + NM_133509 RAD51B 0 . . . 4.5 70.3 56 5.24 No 26 0.77 No 0 0 No -17 0.45 No 32 60.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68610937 + NM_133509 RAD51B 0 . . . 5.58 75.55 16 4.91 No 72 1.01 Yes 0 0 No -27 0.4 No 53 70.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89716492 + NM_000314 PTEN 0 . . . 5.09 77.86 37 6.86 Yes 56 1.42 Yes 0 0 No -46 0.51 No 45 55.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108156574 + NM_000051 ATM 0 . . . 1.41 0 23 5 No 24 0.73 No 0 0 No -22 0.78 Yes 42 77.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68473190 + NM_133509 RAD51B 0 . . . 8.94 77.75 17 5.57 Yes 61 0.77 No 0 0 No -16 0.72 Yes 38 74.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47785594 + NM_000251 MSH2 0 . . . 8.97 79.05 19 5.41 No 16 1.08 Yes 0 0 No -30 0.56 No 42 87.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215647604 - NM_000465 BARD1 0 . . . 2.78 69.63 28 5.29 No 64 0.82 Yes 0 0 No -27 0.85 Yes 47 40.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68340385 + NM_133509 RAD51B 0 . . . 3.28 70.7 14 3.87 No 74 -2.95 No 0 0 No -29 0.6 No 48 54.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215674184 - NM_000465 BARD1 0 . . . 5.14 71.72 37 7.93 Yes NA NA NA 0 0 No -28 0.53 No 45 28.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59931270 - NM_032043 BRIP1 0 . . . 4.65 74.78 28 5.38 No 34 0.85 Yes 0 0 No -27 0.67 Yes 36 68.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21983984 - NM_000077 CDKN2A 0 . . . 7.22 88.63 14 5.48 No 8 1.63 Yes 0 0 No -29 0.64 No 50 50.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59925991 - NM_032043 BRIP1 0 . . . 1.68 75.24 40 5.16 No 61 0.77 No 0 0 No -36 0.44 No 52 35.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94166099 - NM_005591 MRE11 0 . . . 1.45 0 10 5.38 No 3 0.04 No 0 0 No -20 0.73 Yes 51 54.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68970511 + NM_133509 RAD51B 0 . . . 0.83 62.51 32 7 Yes 20 0.31 No 0 0 No -31 0.72 Yes 43 31.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41005097 + NM_001164269 RAD51 0 . . . 3.27 84.41 28 4.75 No 32 1.39 Yes 0 0 No -28 0.77 Yes 26 74.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32931792 + NM_000059 BRCA2 0 . . . 1.66 75.48 26 7.81 Yes 47 0.54 No 0 0 No -25 0.77 Yes 47 83.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94173586 - NM_005591 MRE11 0 . . . 1.2 75.3 23 5.83 Yes 39 0.49 No 0 0 No -22 0.33 No 36 60.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59865325 - NM_032043 BRIP1 0 . . . 6.05 90.68 28 6.23 Yes 61 1.27 Yes 0 0 No -27 0.85 Yes 43 51.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41265205 - NM_007294 BRCA1 0 . . . 4.14 74.13 35 7.58 Yes 6 0.16 No 0 0 No -34 0.57 No 52 32.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131896361 + NM_005732 RAD50 0 . . . 0.95 59.17 35 6.27 Yes 21 0.07 No 0 0 No -34 0.42 No 41 47.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59805456 - NM_032043 BRIP1 0 . . . 0.09 74.68 15 4.67 No 4 0.41 No 0 0 No -22 0.56 No 54 85.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69028750 + NM_133509 RAD51B 0 . . . 1.64 67.71 29 5.92 Yes 26 0.49 No 0 0 No -28 0.95 Yes 32 52.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47736064 + NM_000251 MSH2 0 . . . 0.38 75.48 17 5.26 No 64 1.38 Yes 0 0 No -21 0.29 No 45 73.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47717233 + NM_000251 MSH2 0 . . . 1.36 65.81 19 4.94 No 66 1.21 Yes 0 0 No -18 0.43 No 46 38.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89622955 + NM_000314 PTEN 0 . . . 3.72 71.17 16 4.67 No 41 1.41 Yes 0 0 No -20 0.56 No 38 63.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47719364 + NM_000251 MSH2 0 . . . 1.74 68.21 30 6.14 Yes 60 0.98 Yes 0 0 No -29 0.69 Yes 44 69.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47717760 + NM_000251 MSH2 0 . . . 2.13 64.63 23 5.28 No 75 1.47 Yes 0 0 No -23 0.5 No 41 81.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1211391 + NM_000455 STK11 0 . . . 1.87 76.12 32 4.43 No 73 -0.86 No 0 0 No -26 0.56 No 50 63.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32888573 + NM_000059 BRCA2 0 . . . 1 0 25 7.48 Yes 10 0.43 No 0 0 No -24 0.95 Yes 44 89.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59874133 - NM_032043 BRIP1 0 . . . 8.12 81.52 27 5.19 No 52 1.05 Yes 0 0 No -26 0.6 No 40 82.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1229737 + NM_000455 STK11 0 . . . 0.69 65.31 20 4.9 No NA NA NA 0 0 No -19 0.25 No 62 15.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48016383 + NM_000179 MSH6 0 . . . 6.95 88.02 21 5.28 No 70 0.92 Yes 0 0 No -20 0.4 No 50 70 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104171473 - NM_001100119 XRCC3 0 . . . 3.11 74.11 17 6.29 Yes 75 -3.23 No 0 0 No -16 0.47 No 51 68.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68298017 + NM_133509 RAD51B 0 . . . 0.99 60.35 16 4.66 No 74 -5.62 No 0 0 No -18 0.41 No 51 77.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32957822 + NM_000059 BRCA2 0 . . . 1.86 67.51 23 4.3 No 6 0.02 No 0 0 No -22 0.86 Yes 48 46.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215655513 - NM_000465 BARD1 0 . . . 3.45 70.46 23 4.9 No 3 0.75 No 0 0 No -40 0.75 Yes 42 54.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29091774 - NM_001005735 CHEK2 0 . . . 1.29 69.29 12 5.16 No 73 -1.91 No 0 0 No -24 0.46 No 27 89.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41012241 + NM_001164269 RAD51 0 . . . 2.11 76.16 17 6.16 Yes 29 0.32 No 0 0 No -16 0.68 Yes 50 45.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47708826 + NM_000251 MSH2 0 . . . 5.01 80.64 37 5.67 Yes 10 0.96 Yes 0 0 No -36 0.61 No 48 81.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190654072 + NM_000534 PMS1 0 . . . 6.87 80.67 28 5.27 No 7 0.63 No 0 0 No -27 0.42 No 51 79.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32907112 + NM_000059 BRCA2 0 . . . 7.5 95.2 52 8.55 Yes 56 0.27 No 0 0 No -22 0.55 No 51 62.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84400734 - NM_139076 FAM175A 0 . . . 3.84 65.96 34 5.83 Yes 42 0.58 No 0 0 No -31 0.44 No 33 73.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68966838 + NM_133509 RAD51B 0 . . . 6.73 82.64 26 5.24 No 10 0.76 No 0 0 No -26 0.38 No 48 94.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59817049 - NM_032043 BRIP1 0 . . . 1.21 74.55 18 4.86 No 41 1.33 Yes 0 0 No -40 0.61 No 11 30.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108097823 + NM_000051 ATM 0 . . . 1.71 63.93 18 4.24 No -4 0.66 No 0 0 No -18 0.37 No 43 45.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215592613 - NM_000465 BARD1 0 . . . 5.62 81.76 22 5.29 No 67 1.55 Yes 0 0 No -49 0.53 No 50 72.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6033050 - NM_000535 PMS2 0 . . . 0.27 74.68 55 7.4 Yes 34 0.51 No 0 0 No -50 0.77 Yes 50 89.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69084085 + NM_133509 RAD51B 0 . . . 2.93 68.43 24 6.14 Yes 66 1.86 Yes 0 0 No -23 0.88 Yes 45 87.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68420195 + NM_133509 RAD51B 0 . . . 6.08 81.71 34 7.16 Yes 3 0.34 No 0 0 No -33 0.64 No 48 46.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68306863 + NM_133509 RAD51B 0 . . . 9.64 89.16 28 5.29 No 15 0.74 No 0 0 No -52 0.65 No 43 75.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68324320 + NM_133509 RAD51B 0 . . . 1.02 53.28 21 3.62 No 21 0.78 Yes 0 0 No -27 0.58 No 28 53.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32946449 + NM_000059 BRCA2 0 . . . 0.31 72.78 27 5.74 Yes 50 0.53 No 0 0 No -26 0.52 No 40 88.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68359173 + NM_133509 RAD51B 0 . . . 1.88 56.12 33 6.07 Yes 69 -6.31 No 0 0 No -24 0.59 No 28 49.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37040671 + NM_000249 MLH1 0 . . . 5.32 73.92 19 5 No 21 0.91 Yes 0 0 No -30 0.33 No 46 79.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68809440 + NM_133509 RAD51B 0 . . . 0.33 67.19 22 5 No 57 -2.46 No 0 0 No -28 0.47 No 49 48.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68712128 + NM_133509 RAD51B 0 . . . 1.33 63.17 12 5.09 No 69 -4.81 No 0 0 No -19 0.51 No 29 75.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59863938 - NM_032043 BRIP1 0 . . . 6.02 78 24 6.52 Yes 72 -3.52 No 0 0 No -23 0.81 Yes 43 57.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32964742 + NM_000059 BRCA2 0 . . . 7.07 84.39 30 5.48 No 14 0.55 No 0 0 No -29 0.88 Yes 44 88.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47650053 + NM_000251 MSH2 0 . . . 6.16 83.21 12 4.24 No 43 0.46 No 0 0 No -41 0.24 No 46 70.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68833665 + NM_133509 RAD51B 0 . . . 0.09 68.21 19 4.6 No 7 0.54 No 0 0 No -22 0.39 No 42 76.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68376070 + NM_133509 RAD51B 0 . . . 0.48 64.1 18 7.61 Yes -4 0 No 0 0 No -37 0.55 No 43 51.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131921050 + NM_005732 RAD50 0 . . . 6.17 84.84 36 5.77 Yes 24 1.11 Yes 0 0 No -25 0.52 No 47 73.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48027142 + NM_000179 MSH6 0 . . . 3.69 74.85 36 4.56 No 67 -4.36 No 0 0 No -35 0.87 Yes 41 59.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7592223 - NM_000546 TP53 0 . . . 0.62 70.63 11 4.12 No -2 0.05 No 0 0 No -22 0.53 No 29 55.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90994650 - NM_002485 NBN 0 . . . 5.42 77.65 25 5.67 Yes 10 1.17 Yes 0 0 No -24 0.77 Yes 44 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68403771 + NM_133509 RAD51B 0 . . . 2.45 82.9 30 6.63 Yes 7 0.6 No 0 0 No -29 0.74 Yes 15 58.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23623630 - NM_024675 PALB2 0 . . . 0.22 82.27 22 4.46 No 63 -5.17 No 0 0 No -20 0.78 Yes 44 31.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6016823 - NM_000535 PMS2 0 . . . 2.45 66.21 35 7.43 Yes 57 0.91 Yes 0 0 No -34 0.58 No 42 54.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41224078 - NM_007294 BRCA1 0 . . . 7.83 80.42 15 4.58 No 50 0.51 No 0 0 No -18 0.22 No 45 65.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59929721 - NM_032043 BRIP1 0 . . . 7.06 76.44 29 6.71 Yes 75 0.55 No 0 0 No -28 0.56 No 39 76.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131955715 + NM_005732 RAD50 0 . . . 4.42 84.22 22 5.04 No 8 1.13 Yes 0 0 No -21 0.53 No 50 95.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131961681 + NM_005732 RAD50 0 . . . 1.65 73.91 25 5.39 No 7 0.95 Yes 0 0 No -24 0.79 Yes 51 76.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69063283 + NM_133509 RAD51B 0 . . . 8.96 79.62 17 3.84 No 21 0.82 Yes 0 0 No -45 0.74 Yes 46 87.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131922405 + NM_005732 RAD50 0 . . . 1.19 0 19 4.9 No 76 -2.1 No 0 0 No -40 0.32 No 45 48.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59826253 - NM_032043 BRIP1 0 . . . 3.42 70.85 30 6.47 Yes 21 1.71 Yes 0 0 No -29 0.9 Yes 37 78.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37053971 + NM_000249 MLH1 0 . . . 7.81 91.59 30 5.38 No 7 0.9 Yes 0 0 No -29 0.47 No 40 45.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56775175 + NM_058216 RAD51C 0 . . . 3.69 75.13 17 5.92 Yes 16 1.1 Yes 0 0 No -30 0.31 No 42 94.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47801107 + NM_000251 MSH2 0 . . . 0.92 63.7 27 5.17 No 0 -1.06 No 0 0 No -54 0.63 No 59 37.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29113928 - NM_001005735 CHEK2 0 . . . 2.66 77.33 32 5.27 No 48 0.05 No 0 0 No -22 0.68 Yes 52 78.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68348029 + NM_133509 RAD51B 0 . . . 0.13 0 14 3.68 No 59 0.97 Yes 0 0 No -18 0.62 No 22 53.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47782400 + NM_000251 MSH2 0 . . . 3.55 71.66 17 6.16 Yes 69 -5.81 No 0 0 No -28 0.44 No 48 70.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68687531 + NM_133509 RAD51B 0 . . . 3.64 73.78 19 4.8 No 69 -5.68 No 0 0 No -21 0.32 No 49 81.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37086430 + NM_000249 MLH1 0 . . . 8.96 85.31 12 4.84 No 49 0.52 No 0 0 No -19 0.64 No 42 60.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29114657 - NM_001005735 CHEK2 0 . . . 0.93 68.26 81 8.94 Yes 53 1.15 Yes 0 0 No -27 0.89 Yes 60 36.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69126519 + NM_133509 RAD51B 0 . . . 3.35 70.74 20 5.57 Yes NA NA NA 0 0 No -19 0.69 Yes 46 41.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23626672 - NM_024675 PALB2 0 . . . 1 73.84 15 4.98 No 58 -4.39 No 0 0 No -49 0.5 No 47 89.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59911246 - NM_032043 BRIP1 0 . . . 7.88 88.99 36 6.08 Yes 42 0.36 No 0 0 No -16 0.41 No 37 88.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68792941 + NM_133509 RAD51B 0 . . . 4.37 80.12 18 5.39 No 6 1.23 Yes 0 0 No -48 0.56 No 52 85.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190698383 + NM_000534 PMS1 0 . . . 4.63 86.46 33 5.66 Yes 3 1.37 Yes 0 0 No -32 0.52 No 41 54.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215654373 - NM_000465 BARD1 0 . . . 2.08 0 51 7.13 Yes 30 1.1 Yes 0 0 No -33 0.67 Yes 28 94.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215632567 - NM_000465 BARD1 0 . . . 0.82 0 18 4.9 No 37 0.21 No 0 0 No -17 0.46 No 42 64.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68556953 + NM_133509 RAD51B 0 . . . 3.57 72.24 20 5.57 Yes -1 0.35 No 0 0 No -19 0.56 No 45 66.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21977141 - NM_000077 CDKN2A 0 . . . 1.03 68.85 22 4.85 No -1 0.51 No 0 0 No -28 0.74 Yes 55 50.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68777044 + NM_133509 RAD51B 0 . . . 8.43 87.65 50 7.17 Yes 7 0.69 No 0 0 No -21 0.52 No 51 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41247661 - NM_007294 BRCA1 0 . . . 0.16 60.39 29 7.35 Yes 4 0.37 No 0 0 No -28 0.89 Yes 54 30.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68841943 + NM_133509 RAD51B 0 . . . 1.59 59.33 13 5.39 No 12 0.7 No 0 0 No -22 0.38 No 33 58.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37049814 + NM_000249 MLH1 0 . . . 3.6 85.02 34 5.81 Yes 4 1.2 Yes 0 0 No -33 0.57 No 40 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41247864 - NM_007294 BRCA1 0 . . . 0.68 66.7 65 9.89 Yes 36 -2.68 No 0 0 No -59 0.55 No 45 26.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69034613 + NM_133509 RAD51B 0 . . . 1.96 79.31 29 5.63 Yes 34 -4.21 No 0 0 No -28 0.57 No 46 74.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69124880 + NM_133509 RAD51B 0 . . . 3.97 74.06 24 5.1 No 19 -2.2 No 0 0 No -24 0.43 No 49 37.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47799667 + NM_000251 MSH2 0 . . . 7.24 80.05 31 6.69 Yes 23 -1.82 No 0 0 No -25 0.47 No 51 69.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69019742 + NM_133509 RAD51B 0 . . . 0.78 68.7 21 5.09 No 7 1.25 Yes 0 0 No -20 0.75 Yes 37 38.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108234725 + NM_000051 ATM 0 . . . 0.01 66.79 29 3.59 No 60 0.79 Yes 0 0 No -25 0.66 Yes 44 48.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59874874 - NM_032043 BRIP1 0 . . . 5.05 70.16 16 4.47 No 30 1.68 Yes 0 0 No -36 0.49 No 41 84.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84407192 - NM_139076 FAM175A 0 . . . 7.61 83.67 63 7.79 Yes 5 0.9 Yes 0 0 No -62 0.56 No 34 45.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47767816 + NM_000251 MSH2 0 . . . 2.89 74.93 33 5.1 No 53 0.18 No 0 0 No -29 0.45 No 54 77.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41197560 - NM_007294 BRCA1 0 . . . 0.42 79.32 26 4.73 No 39 1.79 Yes 0 0 No -24 0.62 No 47 42.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6040902 - NM_000535 PMS2 0 . . . 0.21 69.45 24 5.2 No 17 0.19 No 0 0 No -23 0.72 Yes 49 70.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69069047 + NM_133509 RAD51B 0 . . . 4.26 80.35 45 6.92 Yes 3 0.74 No 0 0 No -20 0.73 Yes 41 56.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68648137 + NM_133509 RAD51B 0 . . . 2.03 74.85 26 5 No 65 0.38 No 0 0 No -25 0.79 Yes 51 20.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68637225 + NM_133509 RAD51B 0 . . . 5.88 81.08 19 3.69 No 32 1.43 Yes 0 0 No -45 0.51 No 41 39.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41254134 - NM_007294 BRCA1 0 . . . 0.87 72.04 28 5.66 Yes 15 0.32 No 0 0 No -27 0.9 Yes 43 61.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59817580 - NM_032043 BRIP1 0 . . . 9.98 86.09 35 5.46 No 72 -2.8 No 0 0 No -20 0.75 Yes 53 48.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41255105 - NM_007294 BRCA1 0 . . . 2.98 72.77 35 5.92 Yes -1 1.37 Yes 0 0 No -26 0.45 No 49 54.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68363590 + NM_133509 RAD51B 0 . . . 0.55 56.11 40 6.8 Yes 63 0.31 No 0 0 No -26 0.53 No 39 76.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94195976 - NM_005591 MRE11 0 . . . 6.98 86.96 27 3.88 No 46 1.56 Yes 0 0 No -26 0.9 Yes 51 66.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131916894 + NM_005732 RAD50 0 . . . 2.71 66.46 29 7.61 Yes 16 1.1 Yes 0 0 No -28 0.73 Yes 42 92.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47774548 + NM_000251 MSH2 0 . . . 3.27 82.03 23 4.9 No 43 -4.39 No 0 0 No -22 0.96 Yes 41 38.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68711009 + NM_133509 RAD51B 0 . . . 0.7 77.77 45 5.83 Yes 76 -5.71 No 0 0 No -21 0.75 Yes 50 69.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29092693 - NM_001005735 CHEK2 0 . . . 1.49 67.45 25 5.36 No 43 0.6 No 0 0 No -25 0.54 No 48 80.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68946430 + NM_133509 RAD51B 0 . . . 5.29 82.59 10 6.08 Yes 2 1.62 Yes 0 0 No -34 0.34 No 17 94.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94181953 - NM_005591 MRE11 0 . . . 6.59 93.9 28 3.59 No 66 0.71 No 0 0 No -20 0.59 No 43 92.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68980560 + NM_133509 RAD51B 0 . . . 7.62 88.33 12 5.39 No 4 0.14 No 0 0 No -25 0.67 Yes 41 38.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68601730 + NM_133509 RAD51B 0 . . . 3.93 77.36 19 6.92 Yes 39 0.64 No 0 0 No -26 0.49 No 42 87.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75496069 - NM_001040108 MLH3 0 . . . 5.49 80.11 22 6 Yes -2 0.34 No 0 0 No -21 0.78 Yes 38 43.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108144444 + NM_000051 ATM 0 . . . 3.23 84.94 15 4.61 No 7 0.96 Yes 0 0 No -26 0.39 No 20 71.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59798935 - NM_032043 BRIP1 0 . . . 6.41 82.06 24 6.5 Yes 42 0.46 No 0 0 No -23 0.59 No 43 61.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108152101 + NM_000051 ATM 0 . . . 6.3 72.59 33 6.86 Yes 2 0.68 No 0 0 No -32 0.59 No 37 92.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68551982 + NM_133509 RAD51B 0 . . . 4.81 77.17 22 4.68 No 54 0.27 No 0 0 No -21 0.64 No 49 77.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89649027 + NM_000314 PTEN 0 . . . 1.59 52.54 25 4.64 No 31 1.11 Yes 0 0 No -24 0.63 No 27 91.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47778461 + NM_000251 MSH2 0 . . . 0.69 0 27 5.29 No 20 1.61 Yes 0 0 No -26 0.83 Yes 38 81.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68292810 + NM_133509 RAD51B 0 . . . 1.25 57.1 9 5.28 No 27 -3.81 No 0 0 No -24 0.81 Yes 39 91.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90992588 - NM_002485 NBN 0 . . . 6 77.52 28 5.83 Yes 4 1.13 Yes 0 0 No -27 0.69 Yes 40 90.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75507320 - NM_001040108 MLH3 0 . . . 5.34 81.18 22 5.29 No 72 0.66 No 0 0 No -21 0.55 No 52 81.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68437302 + NM_133509 RAD51B 0 . . . 0.72 57.17 20 4.7 No 61 0.55 No 0 0 No -19 0.54 No 48 60.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47727907 + NM_000251 MSH2 0 . . . 0.51 70.73 46 6.13 Yes 34 -2.95 No 0 0 No -22 0.38 No 48 47.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131972344 + NM_005732 RAD50 0 . . . 11.05 83.3 21 5.66 Yes 67 -3.72 No 0 0 No -20 0.7 Yes 43 86.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59757978 - NM_032043 BRIP1 0 . . . 0.36 61.05 23 5.65 Yes 48 0.84 Yes 0 0 No -22 0.85 Yes 42 47.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131911833 + NM_005732 RAD50 0 . . . 3.48 67.39 42 6.56 Yes 24 1.42 Yes 0 0 No -38 0.32 No 34 90.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32966030 + NM_000059 BRCA2 0 . . . 0.1 63.31 40 6.69 Yes -3 0.33 No 0 0 No -26 0.43 No 61 55.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59767404 - NM_032043 BRIP1 0 . . . 8.47 84.6 15 4.58 No 43 0.64 No 0 0 No -35 0.51 No 44 60.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32910227 + NM_000059 BRCA2 0 . . . 1.12 81.83 27 5.1 No 31 1.06 Yes 0 0 No -26 0.71 Yes 48 74.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47761881 + NM_000251 MSH2 0 . . . 1.34 64.81 15 4.11 No 39 1.83 Yes 0 0 No -20 0.42 No 46 83.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75479109 - NM_001040108 MLH3 0 . . . 2.45 56.82 42 7.31 Yes 59 0.51 No 0 0 No -47 0.33 No 31 70.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68409913 + NM_133509 RAD51B 0 . . . 3.66 71.88 28 5.57 Yes 73 0.77 Yes 0 0 No -27 0.72 Yes 36 62.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68851436 + NM_133509 RAD51B 0 . . . 6.46 75.55 14 5 No 73 1.02 Yes 0 0 No -34 0.49 No 17 67.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68994790 + NM_133509 RAD51B 0 . . . 1.61 69.08 13 6.21 Yes 67 0.23 No 0 0 No -38 0.36 No 52 57.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89658211 + NM_000314 PTEN 0 . . . 6.98 82.12 20 7.14 Yes 20 0.34 No 0 0 No -19 0.75 Yes 30 58.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89653931 + NM_000314 PTEN 0 . . . 8.85 80.65 25 5.47 No 19 1.1 Yes 0 0 No -24 0.86 Yes 39 54.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6011584 - NM_000535 PMS2 0 . . . 5.43 88.68 27 5.1 No 9 0.99 Yes 0 0 No -22 0.61 No 49 93.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89697593 + NM_000314 PTEN 0 . . . 5.61 81.57 37 6.03 Yes 73 0.45 No 0 0 No -26 0.42 No 48 52.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68813541 + NM_133509 RAD51B 0 . . . 5.75 78.75 12 3.9 No 34 1.51 Yes 0 0 No -41 0.46 No 45 73.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190665905 + NM_000534 PMS1 0 . . . 9.45 93.67 18 4.46 No 71 0.53 No 0 0 No -17 0.75 Yes 47 85.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47785649 + NM_000251 MSH2 0 . . . 7.42 73.94 16 5.09 No 71 1.04 Yes 0 0 No -45 0.6 No 41 46.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21974997 - NM_000077 CDKN2A 0 . . . 4.05 69.52 25 5.31 No 11 1.7 Yes 0 0 No -25 0.48 No 47 92.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69132887 + NM_133509 RAD51B 0 . . . 0.52 68.61 10 5.1 No -3 0.84 Yes 0 0 No -19 0.57 No 34 74.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33428475 - NM_002878 RAD51D 0 . . . 6.85 85.59 29 5.48 No 17 1.01 Yes 0 0 No -28 0.87 Yes 41 89.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68791503 + NM_133509 RAD51B 0 . . . 5.49 78.27 17 4.8 No 26 0.54 No 0 0 No -21 0.86 Yes 50 44.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23636408 - NM_024675 PALB2 0 . . . 2.83 70.43 28 5.18 No 30 2.02 Yes 0 0 No -22 0.89 Yes 45 80.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68941039 + NM_133509 RAD51B 0 . . . 4.5 87.52 15 5 No 26 -0.57 No 0 0 No -18 0.33 No 52 61.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94152502 - NM_005591 MRE11 0 . . . 1.37 59.75 18 8.17 Yes 13 -2.69 No 0 0 No -18 0.49 No 46 39.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41206310 - NM_007294 BRCA1 0 . . . 0.06 77.37 16 4.69 No 14 0.68 No 0 0 No -15 0.41 No 49 80.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68477582 + NM_133509 RAD51B 0 . . . 3.34 82.34 24 5.65 Yes 37 0.81 Yes 0 0 No -23 0.41 No 45 39.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6028787 - NM_000535 PMS2 0 . . . 3.18 70.12 18 4.9 No 2 0.54 No 0 0 No -44 0.64 No 63 51.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69026096 + NM_133509 RAD51B 0 . . . 1.48 75.15 15 4.58 No 70 -5.71 No 0 0 No -22 0.46 No 46 75.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105203017 + NM_021930 RINT1 0 . . . 2.04 83.86 28 5.8 Yes 18 0.05 No 0 0 No -27 0.55 No 52 48.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68500561 + NM_133509 RAD51B 0 . . . 1.7 62.53 16 5.8 Yes 74 0.99 Yes 0 0 No -25 0.42 No 50 35.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59915309 - NM_032043 BRIP1 0 . . . 1.34 0 39 6.32 Yes 48 0.81 Yes 0 0 No -26 0.77 Yes 37 61.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90982310 - NM_002485 NBN 0 . . . 1.47 77.63 13 4.82 No 7 1.01 Yes 0 0 No -37 0.55 No 51 77.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68858091 + NM_133509 RAD51B 0 . . . 7.54 78.16 32 6.07 Yes 36 1.31 Yes 0 0 No -21 0.5 No 45 57.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69132668 + NM_133509 RAD51B 0 . . . 0.76 0 17 4.99 No 34 0.05 No 0 0 No -17 0.29 No 37 29.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68912573 + NM_133509 RAD51B 0 . . . 3.95 80.29 25 5.55 No 64 0.07 No 0 0 No -25 0.71 Yes 48 48.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68789546 + NM_004360 CDH1 0 . . . 8 76.49 20 7.45 Yes 48 1.56 Yes 0 0 No -37 0.59 No 27 78.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215603176 - NM_000465 BARD1 0 . . . 0.47 0 16 4.69 No 66 -3.63 No 0 0 No -38 0.75 Yes 49 62.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68287181 + NM_133509 RAD51B 0 . . . 2.41 74.36 47 7.21 Yes 19 1.03 Yes 0 0 No -27 0.57 No 39 91.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215610161 - NM_000465 BARD1 0 . . . 3.35 74.7 19 4.9 No 21 1.1 Yes 0 0 No -18 0.6 No 50 53.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59801775 - NM_032043 BRIP1 0 . . . 3.91 73.17 29 5.89 Yes 15 1.62 Yes 0 0 No -28 0.62 No 43 51.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68820970 + NM_004360 CDH1 0 . . . 3.18 0 21 3.67 No 24 0.31 No 0 0 No -20 0.5 No 42 66.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59773897 - NM_032043 BRIP1 0 . . . 3.45 71.09 18 4.58 No 51 0.68 No 0 0 No -44 0.58 No 42 92.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108230002 + NM_000051 ATM 0 . . . 4.37 78.79 13 3.95 No 57 -4.29 No 0 0 No -25 0.86 Yes 39 83.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68850105 + NM_004360 CDH1 0 . . . 2.24 80.12 29 6.32 Yes 7 1.16 Yes 0 0 No -28 0.82 Yes 51 82.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68985102 + NM_133509 RAD51B 0 . . . 3.01 81.53 26 5.54 No 57 1.32 Yes 0 0 No -25 0.68 Yes 49 79.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47632177 + NM_000251 MSH2 0 . . . 0.8 0 38 7.03 Yes 45 -3.78 No 0 0 No -25 0.35 No 51 67.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190656391 + NM_000534 PMS1 0 . . . 5.15 74.29 21 5.04 No 57 0.57 No 23 0.56 Yes -20 0.66 No 50 73.47 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 48012566 + NM_000179 MSH6 0 . . . 0.27 74.73 18 4.58 No 22 1.06 Yes 0 0 No -17 0.39 No 43 94.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69074200 + NM_133509 RAD51B 0 . . . 1.52 0 43 7.79 Yes 58 -0.53 No 0 0 No -30 0.85 Yes 24 41.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68761014 + NM_133509 RAD51B 0 . . . 5.45 80.55 15 4.57 No 70 1.85 Yes 0 0 No -22 0.63 No 40 63.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32925870 + NM_000059 BRCA2 0 . . . 4.9 70.32 15 5.33 No 69 -5 No 0 0 No -27 0.56 No 50 61.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89661179 + NM_000314 PTEN 0 . . . 5.42 79.88 27 7.53 Yes 23 1.78 Yes 0 0 No -26 0.67 Yes 35 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68813292 + NM_133509 RAD51B 0 . . . 1.3 68.76 21 5 No 30 0.81 Yes 0 0 No -20 0.64 No 33 73.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32955174 + NM_000059 BRCA2 0 . . . 3.93 0 20 5.46 No 30 0.26 No 0 0 No -13 0.36 No 20 41.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131901226 + NM_005732 RAD50 0 . . . 6.63 71.58 17 3.93 No 42 1.96 Yes 0 0 No -29 0.77 Yes 24 51.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69034230 + NM_133509 RAD51B 0 . . . 2.2 72.02 12 4.69 No 24 1.68 Yes 0 0 No -19 0.62 No 45 88.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131973000 + NM_005732 RAD50 0 . . . 3.54 68.18 23 5.66 Yes 32 1.25 Yes 0 0 No -22 0.77 Yes 41 48.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68415963 + NM_133509 RAD51B 0 . . . 0.59 75.65 19 7.21 Yes 56 1.37 Yes 0 0 No -18 0.67 Yes 63 46.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68539740 + NM_133509 RAD51B 0 . . . 6.4 81.56 15 4.12 No 45 -2.8 No 0 0 No -27 0.61 No 48 56.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108181284 + NM_000051 ATM 0 . . . 1.66 74.21 28 5.09 No 63 0.69 No 0 0 No -27 0.6 No 49 80.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68503668 + NM_133509 RAD51B 0 . . . 6.8 80.78 16 5.43 No 71 0.38 No 0 0 No -23 0.66 Yes 36 86.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68474395 + NM_133509 RAD51B 0 . . . 6.79 84.62 55 7.92 Yes 30 1.3 Yes 0 0 No -54 0.65 No 39 97.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68782320 + NM_133509 RAD51B 0 . . . 2.45 67.07 27 4.65 No 39 1.46 Yes 0 0 No -26 0.94 Yes 43 77.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29135532 - NM_001005735 CHEK2 0 . . . 2.47 68.84 28 4.33 No 12 -0.79 No 0 0 No -28 0.48 No 46 40.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68651071 + NM_133509 RAD51B 0 . . . 1.63 84.28 15 4.58 No 76 1.29 Yes 0 0 No -49 0.34 No 50 84.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59936962 - NM_032043 BRIP1 0 . . . 0.15 58.65 15 5.29 No 0 0.02 No 0 0 No -44 0.36 No 58 26.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89662440 + NM_000314 PTEN 0 . . . 1.08 0 12 3.73 No 76 1.6 Yes 0 0 No -28 0.71 Yes 46 34.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68677180 + NM_133509 RAD51B 0 . . . 5.21 77.64 25 4.22 No 72 -3.95 No 0 0 No -20 0.49 No 34 67.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47766199 + NM_000251 MSH2 0 . . . 3.84 67.14 57 7.42 Yes 75 1.43 Yes 0 0 No -40 0.58 No 47 44.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68398964 + NM_133509 RAD51B 0 . . . 0.37 58.19 28 5.29 No 13 -1.65 No 0 0 No -27 0.62 No 20 84.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7576692 - NM_000546 TP53 0 . . . 1.99 76.92 58 6.38 Yes -1 0.47 No 23 0.89 Yes -30 0.48 No 59 50.93 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 89643679 + NM_000314 PTEN 0 . . . 3.69 76.43 16 5.23 No 47 0.7 No 0 0 No -27 0.22 No 45 87.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89715086 + NM_000314 PTEN 0 . . . 4.19 71.37 47 9.44 Yes 10 1.22 Yes 0 0 No -29 0.58 No 33 55.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89640871 + NM_000314 PTEN 0 . . . 2.76 76.22 28 5.29 No 44 1.83 Yes 0 0 No -27 0.7 Yes 50 67.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104162510 - NM_001100119 XRCC3 0 . . . 10.21 83.1 24 5.48 No 39 -1.24 No 0 0 No -23 0.82 Yes 43 63.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32956873 + NM_000059 BRCA2 0 . . . 6.79 89.78 25 4.97 No 57 -4.53 No 0 0 No -24 0.95 Yes 48 49.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131905072 + NM_005732 RAD50 0 . . . 1.51 74.57 23 5.04 No 62 -5.99 No 0 0 No -23 0.72 Yes 49 54.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68945789 + NM_133509 RAD51B 0 . . . 0.95 70.72 28 6.78 Yes 38 -3.41 No 0 0 No -27 0.84 Yes 38 31.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47720186 + NM_000251 MSH2 0 . . . 5.14 74.04 27 5.48 No 3 0.52 No 0 0 No -26 0.68 Yes 45 55.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48006416 + NM_000179 MSH6 0 . . . 1.88 0 20 5.13 No -4 0.04 No 0 0 No -29 0.7 Yes 51 86.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90985879 - NM_002485 NBN 0 . . . 5.73 66.98 25 5.48 No 10 1.09 Yes 0 0 No -24 0.94 Yes 35 59.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68334319 + NM_133509 RAD51B 0 . . . 0.58 63.42 28 5.57 Yes 10 1.15 Yes 0 0 No -26 0.8 Yes 44 94.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48013519 + NM_000179 MSH6 0 . . . 4.02 75.98 12 4.09 No 37 0.97 Yes 0 0 No -25 0.5 No 21 77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68434721 + NM_133509 RAD51B 0 . . . 6.87 75.72 13 5.1 No -4 0.13 No 0 0 No -26 0.57 No 50 61.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108128704 + NM_000051 ATM 0 . . . 1.56 69.87 29 5.18 No 58 1.6 Yes 0 0 No -28 0.65 No 43 35.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89632314 + NM_000314 PTEN 0 . . . 3.7 69.94 20 5 No 49 -2.95 No 0 0 No -19 0.78 Yes 48 56.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131976732 + NM_005732 RAD50 0 . . . 3.64 73.36 30 5.57 Yes 64 -4.86 No 0 0 No -29 0.83 Yes 49 53.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69069578 + NM_133509 RAD51B 0 . . . 4.32 81.04 24 5.08 No 7 0.53 No 0 0 No -23 0.72 Yes 44 42.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52434290 - NM_004656 BAP1 0 . . . 2.39 73.07 21 5.98 Yes 6 0.44 No 0 0 No -20 0.57 No 52 67.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7592307 - NM_000546 TP53 0 . . . 9.64 88.33 46 6.97 Yes NA NA NA 0 0 No -45 0.83 Yes 43 61.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37037731 + NM_000249 MLH1 0 . . . 6.11 84.77 22 4.26 No 74 0.93 Yes 0 0 No -22 0.75 Yes 49 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47640361 + NM_000251 MSH2 0 . . . 4.93 83 9 4.39 No 58 0.52 No 0 0 No -40 0.77 Yes 47 84.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68643546 + NM_133509 RAD51B 0 . . . 1.99 74.06 17 4.58 No 63 -5.51 No 0 0 No -42 0.63 No 48 41.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68582448 + NM_133509 RAD51B 0 . . . 2.8 78.81 32 7.41 Yes 15 0.18 No 0 0 No -28 0.37 No 47 75.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47729047 + NM_000251 MSH2 0 . . . 7.45 79.12 25 4.47 No 67 1.37 Yes 0 0 No -24 0.9 Yes 44 65.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21981759 - NM_000077 CDKN2A 0 . . . 3.6 72.5 34 5.77 Yes 48 0.09 No 0 0 No -25 0.42 No 43 50.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59880894 - NM_032043 BRIP1 0 . . . 0.23 83.39 20 4.59 No 22 1.56 Yes 0 0 No -19 0.87 Yes 36 91.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105185044 + NM_021930 RINT1 0 . . . 1.06 68.06 17 5.39 No 52 0.04 No 0 0 No -26 0.28 No 48 79.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33431733 - NM_002878 RAD51D 0 . . . 2.22 72.76 46 6.97 Yes 70 -4.44 No 0 0 No -20 0.72 Yes 44 40.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59847454 - NM_032043 BRIP1 0 . . . 3.5 67.52 18 5.66 Yes 67 1.14 Yes 0 0 No -17 0.78 Yes 46 45.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32949792 + NM_000059 BRCA2 0 . . . 4.58 88.68 33 5.66 Yes 9 0.89 Yes 0 0 No -25 0.59 No 49 96.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215595908 - NM_000465 BARD1 0 . . . 7.09 80.74 22 5.29 No 23 1.42 Yes 24 0.88 Yes -54 0.37 No 35 88.11 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr17 59875951 - NM_032043 BRIP1 0 . . . 1.76 81.04 46 7.81 Yes 40 1.4 Yes 0 0 No -33 0.8 Yes 48 86.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69094407 + NM_133509 RAD51B 0 . . . 3.24 70.35 35 6.16 Yes 68 1.21 Yes 0 0 No -34 0.57 No 39 40.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68340424 + NM_133509 RAD51B 0 . . . 1.05 61.38 26 6 Yes 49 -4.57 No 0 0 No -25 0.67 Yes 47 49.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68598908 + NM_133509 RAD51B 0 . . . 2.28 81.65 17 6.93 Yes 3 0.86 Yes 0 0 No -16 0.34 No 47 66.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47772208 + NM_000251 MSH2 0 . . . 6.49 85.6 21 5.04 No 74 0.53 No 0 0 No -45 0.64 No 39 59.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47709127 + NM_000251 MSH2 0 . . . 0.09 0 31 6 Yes 60 0.77 Yes 0 0 No -30 0.83 Yes 45 57.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68287549 + NM_133509 RAD51B 0 . . . 5.3 76 20 8.12 Yes 1 0.36 No 0 0 No -19 0.49 No 17 37.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90992726 - NM_002485 NBN 0 . . . 0.86 0 68 8.07 Yes 49 1.11 Yes 0 0 No -28 0.37 No 40 68.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94212821 - NM_005591 MRE11 0 . . . 4.37 84.06 26 6.54 Yes 4 0.64 No 0 0 No -25 0.66 No 45 73.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29093231 - NM_001005735 CHEK2 0 . . . 3.09 73.34 40 6.24 Yes 14 1.28 Yes 0 0 No -35 0.58 No 44 87.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47702555 + NM_000251 MSH2 0 . . . 4.04 83.81 23 5.7 Yes 43 0.31 No 0 0 No -22 0.74 Yes 38 46.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59941685 - NM_032043 BRIP1 0 . . . 8.76 88.42 29 5.39 No 18 0.19 No 0 0 No -28 0.92 Yes 44 52.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68615395 + NM_133509 RAD51B 0 . . . 4.1 73 55 5.99 Yes 43 1.04 Yes 0 0 No -34 0.31 No 46 65.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59767582 - NM_032043 BRIP1 0 . . . 5.77 88.5 42 6.61 Yes 59 0.31 No 0 0 No -28 0.76 Yes 45 64.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69088548 + NM_133509 RAD51B 0 . . . 1.54 78.37 13 5.65 Yes -2 0.38 No 0 0 No -25 0.6 No 44 47.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68557267 + NM_133509 RAD51B 0 . . . 1.79 69.13 30 5.66 Yes 18 0.51 No 0 0 No -29 0.95 Yes 53 64.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89685767 + NM_000314 PTEN 0 . . . 4.63 66.26 21 4.9 No 27 0.91 Yes 0 0 No -20 0.83 Yes 46 62.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105177757 + NM_021930 RINT1 0 . . . 8.79 86.67 26 6.49 Yes 2 0.98 Yes 0 0 No -25 0.94 Yes 51 57.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37045001 + NM_000249 MLH1 0 . . . 1.3 71.77 17 5.2 No 73 1.27 Yes 0 0 No -20 0.57 No 52 66.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68639256 + NM_133509 RAD51B 0 . . . 0.08 59.92 20 5.1 No 60 -2.91 No 0 0 No -19 0.75 Yes 35 53.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68806462 + NM_004360 CDH1 0 . . . 5.74 73.67 27 7.23 Yes 5 0.81 Yes 0 0 No -26 0.71 Yes 53 55.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68942797 + NM_133509 RAD51B 0 . . . 2.19 78.94 21 4.9 No 76 0.52 No 0 0 No -23 0.47 No 49 14.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694852 + NM_000534 PMS1 0 . . . 2.53 0 41 8.58 Yes 56 0.34 No 0 0 No -40 0.5 No 52 44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68709522 + NM_133509 RAD51B 0 . . . 1.91 0 31 5.83 Yes 69 0.5 No 0 0 No -30 0.8 Yes 43 61.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89637397 + NM_000314 PTEN 0 . . . 6.97 76.14 41 6.33 Yes 71 0.77 No 0 0 No -29 0.28 No 42 77.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68785457 + NM_004360 CDH1 0 . . . 0.85 0 77 9.97 Yes 9 1.49 Yes 0 0 No -30 0.45 No 49 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37053853 + NM_000249 MLH1 0 . . . 0.46 60.99 15 4.58 No 28 0.38 No 0 0 No -14 0.27 No 50 93.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23642627 - NM_024675 PALB2 0 . . . 0.59 0 26 5.47 No 3 1.06 Yes 0 0 No -26 0.27 No 44 44.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108216813 + NM_000051 ATM 0 . . . 5.69 70.68 18 4.69 No 42 1.35 Yes 0 0 No -27 0.71 Yes 37 52.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215607911 - NM_000465 BARD1 0 . . . 7.11 80.5 59 10.37 Yes 7 0.62 No 0 0 No -31 0.58 No 37 66.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215602879 - NM_000465 BARD1 0 . . . 1.07 75.19 17 4.58 No 49 0.43 No 0 0 No -56 0.3 No 17 30.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33442194 - NM_002878 RAD51D 0 . . . 0.86 0 15 5.59 Yes 5 0.58 No 0 0 No -24 0.85 Yes 40 43.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21968325 - NM_000077 CDKN2A 0 . . . 2.15 73.88 35 7 Yes 14 -2.79 No 0 0 No -34 0.67 Yes 44 55.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37050614 + NM_000249 MLH1 0 . . . 2.71 89 21 5.74 Yes 6 0.11 No 0 0 No -20 0.84 Yes 48 69.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1210190 + NM_000455 STK11 0 . . . 0.26 79.73 46 4.72 No 74 0 No 0 0 No -30 0.41 No 63 50.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48025159 + NM_000179 MSH6 0 . . . 8.19 85.92 36 6 Yes 38 1.47 Yes 0 0 No -25 0.54 No 47 76.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68872461 + NM_133509 RAD51B 0 . . . 0.7 0 21 4.58 No 20 0.18 No 0 0 No -20 0.96 Yes 13 60.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68377371 + NM_133509 RAD51B 0 . . . 2.85 70.15 18 5.74 Yes 51 1.02 Yes 0 0 No -17 0.53 No 55 25.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37035692 + NM_000249 MLH1 0 . . . 3.84 67.25 18 4.58 No 32 1 Yes 23 0.81 Yes -17 0.51 No 42 58.57 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 59801861 - NM_032043 BRIP1 0 . . . 0.9 65.9 49 8.71 Yes 40 0.61 No 0 0 No -26 0.7 Yes 24 82.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32903298 + NM_000059 BRCA2 0 . . . 2.54 78.86 45 8.3 Yes -3 0.51 No 0 0 No -26 0.58 No 46 85.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68603266 + NM_133509 RAD51B 0 . . . 2.01 68.67 38 6.06 Yes 58 -3.89 No 0 0 No -37 0.65 No 48 75.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190704443 + NM_000534 PMS1 0 . . . 5.04 71.77 10 4 No 63 1.22 Yes 0 0 No -49 0.38 No 39 36.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59836337 - NM_032043 BRIP1 0 . . . 0.75 0 16 3.87 No 62 0.89 Yes 0 0 No -41 0.66 No 38 63.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131941155 + NM_005732 RAD50 0 . . . 0.31 81.72 19 4.51 No 33 1.28 Yes 0 0 No -36 0.55 No 50 65.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68290375 + NM_133509 RAD51B 0 . . . 3.45 74.89 14 5.29 No 5 0.71 No 0 0 No -25 0.75 Yes 37 40.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190727252 + NM_000534 PMS1 0 . . . 6.27 80.55 32 5.65 Yes 34 2.17 Yes 0 0 No -19 0.55 No 40 51.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84380198 - NM_139076 FAM175A 0 . . . 0.24 81.86 19 5.35 No 33 0.99 Yes 0 0 No -29 0.47 No 25 43.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47778993 + NM_000251 MSH2 0 . . . 6.81 82.18 23 5.74 Yes 6 0.87 Yes 0 0 No -23 0.65 No 48 70.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23613839 - NM_024675 PALB2 0 . . . 5.31 87.07 36 4.12 No 66 1.26 Yes 0 0 No -24 0.59 No 45 33.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68878640 + NM_133509 RAD51B 0 . . . 4.81 71.9 13 4.36 No 27 1.05 Yes 0 0 No -23 0.65 No 44 73.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68965204 + NM_133509 RAD51B 0 . . . 5.69 77.95 13 4.36 No 4 1.68 Yes 0 0 No -22 0.6 No 48 91.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59920618 - NM_032043 BRIP1 0 . . . 6.32 80.12 30 6 Yes 30 0.74 No 0 0 No -29 0.52 No 48 41.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108204275 + NM_000051 ATM 0 . . . 3.87 69.35 22 5 No 1 1.07 Yes 0 0 No -21 0.75 Yes 44 40.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32971769 + NM_000059 BRCA2 0 . . . 1.52 66.54 64 8.25 Yes 39 0.85 Yes 0 0 No -23 0.49 No 45 38.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89669461 + NM_000314 PTEN 0 . . . 1.55 74.95 18 6.49 Yes 17 -2.78 No 0 0 No -25 0.35 No 42 53.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68478350 + NM_133509 RAD51B 0 . . . 6.89 87.82 26 4.88 No 61 0.91 Yes 0 0 No -25 0.68 Yes 33 64.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68821750 + NM_004360 CDH1 0 . . . 2.3 84.41 15 5.17 No 11 1.5 Yes 0 0 No -25 0.91 Yes 47 94.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56808109 + NM_058216 RAD51C 0 . . . 1.63 0 24 5.1 No 19 0.66 No 0 0 No -26 0.67 Yes 39 74.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68729227 + NM_133509 RAD51B 0 . . . 3.94 0 30 6.54 Yes 27 0.17 No 0 0 No -29 0.35 No 34 26.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152362930 - NM_005431 XRCC2 0 . . . 0.04 69.88 10 4.69 No 38 0.03 No 0 0 No -52 0.67 Yes 40 68.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215617636 - NM_000465 BARD1 0 . . . 3.04 71.9 20 4.34 No 9 0.97 Yes 0 0 No -26 0.62 No 44 90.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69103980 + NM_133509 RAD51B 0 . . . 5.26 79.79 15 5.48 No 7 1.16 Yes 0 0 No -23 0.29 No 51 75.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40995646 + NM_001164269 RAD51 0 . . . 7.26 84.52 15 5.94 Yes -3 0.76 No 0 0 No -36 0.79 Yes 42 58.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68467379 + NM_133509 RAD51B 0 . . . 8.91 81.05 16 4.69 No 7 1.39 Yes 0 0 No -22 0.39 No 51 67.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68825370 + NM_004360 CDH1 0 . . . 3.78 80.73 50 7.01 Yes 43 1.88 Yes 0 0 No -28 0.65 No 15 85.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41195946 - NM_007294 BRCA1 0 . . . 4.75 75.64 29 6.13 Yes 58 0.74 No 0 0 No -28 0.93 Yes 51 58.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68802391 + NM_133509 RAD51B 0 . . . 0.56 66.07 33 5.66 Yes 45 0.01 No 0 0 No -32 0.77 Yes 54 59.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23621277 - NM_024675 PALB2 0 . . . 2.48 72.18 36 8.52 Yes 53 0.3 No 0 0 No -35 0.9 Yes 52 17.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84381693 - NM_139076 FAM175A 0 . . . 1.6 72.83 24 5.04 No 41 0.81 Yes 0 0 No -23 0.78 Yes 46 68.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89695529 + NM_000314 PTEN 0 . . . 0.9 68.83 30 5.66 Yes 61 1.13 Yes 0 0 No -29 0.77 Yes 39 41.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94208568 - NM_005591 MRE11 0 . . . 5.02 81.46 22 5.82 Yes 43 0.39 No 0 0 No -28 0.38 No 27 62.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75484682 - NM_001040108 MLH3 0 . . . 2.1 80.12 18 6.54 Yes 6 1.35 Yes 0 0 No -33 0.51 No 52 81.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108174304 + NM_000051 ATM 0 . . . 6.03 75.07 27 5.36 No 71 -5.81 No 0 0 No -26 0.62 No 43 67.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68802460 + NM_133509 RAD51B 0 . . . 2.66 72.15 31 5.04 No 61 0.79 Yes 0 0 No -23 0.84 Yes 48 42.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37065411 + NM_000249 MLH1 0 . . . 3.49 55.97 21 4.58 No 16 -1.97 No 0 0 No -20 0.82 Yes 50 84.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108145895 + NM_000051 ATM 0 . . . 5.73 88.3 18 4.77 No 37 1.4 Yes 0 0 No -17 0.3 No 43 58.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68433179 + NM_133509 RAD51B 0 . . . 0.27 70.67 20 5.82 Yes 68 2.19 Yes 0 0 No -19 0.68 Yes 60 31.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84383941 - NM_139076 FAM175A 0 . . . 2.95 67.79 21 4.8 No 25 0.97 Yes 0 0 No -20 0.63 No 42 73.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215630227 - NM_000465 BARD1 0 . . . 3.07 69.64 33 5.83 Yes 9 1.36 Yes 0 0 No -27 0.54 No 49 53.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68780337 + NM_133509 RAD51B 0 . . . 6.56 91.21 17 5.21 No -3 0.22 No 0 0 No -12 0.57 No 35 56.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108112655 + NM_000051 ATM 0 . . . 2.8 82.48 15 4.48 No 6 1.37 Yes 0 0 No -24 0.8 Yes 41 83.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29136308 - NM_001005735 CHEK2 0 . . . 0.53 72.11 38 7.41 Yes 10 0.32 No 0 0 No -37 0.52 No 48 85.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59893772 - NM_032043 BRIP1 0 . . . 4.29 70.6 42 6.42 Yes -3 0.08 No 0 0 No -16 0.49 No 45 51.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84401087 - NM_139076 FAM175A 0 . . . 0.91 0 29 7.64 Yes 44 0.94 Yes 0 0 No -28 0.79 Yes 18 83.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33433809 - NM_002878 RAD51D 0 . . . 6.51 88.99 18 4.83 No 4 1.31 Yes 0 0 No -39 0.64 No 54 82.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89729817 + NM_000314 PTEN 0 . . . 4.66 70.25 23 4.34 No 59 0.04 No 0 0 No -22 0.53 No 44 97.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69106755 + NM_133509 RAD51B 0 . . . 0.52 71.27 16 5.04 No -4 1.33 Yes 0 0 No -45 0.51 No 62 49.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1221049 + NM_000455 STK11 0 . . . 8.44 73.45 19 6.1 Yes 49 0.34 No 0 0 No -25 0.4 No 50 49.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90965642 - NM_002485 NBN 0 . . . 1.23 67.33 21 5.04 No 67 -5.16 No 0 0 No -45 0.52 No 55 12.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47797624 + NM_000251 MSH2 0 . . . 7.77 82.43 24 5 No 63 -2.19 No 0 0 No -23 0.75 Yes 45 53.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41004884 + NM_001164269 RAD51 0 . . . 2.81 74.07 42 9.33 Yes 16 0.58 No 0 0 No -41 0.62 No 42 53.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32888231 + NM_000059 BRCA2 0 . . . 3.54 81.7 13 4.66 No 0 0.97 Yes 0 0 No -42 0.41 No 44 68.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69054938 + NM_133509 RAD51B 0 . . . 8.91 83.81 30 5.22 No 13 1.43 Yes 0 0 No -29 0.9 Yes 45 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68777904 + NM_133509 RAD51B 0 . . . 1.79 69.82 19 5.48 No 53 -5.73 No 0 0 No -18 0.58 No 61 50.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47630402 + NM_000251 MSH2 0 . . . 9.36 91.58 45 7.9 Yes 73 -4.8 No 0 0 No -44 0.54 No 44 61.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68338785 + NM_133509 RAD51B 0 . . . 5.06 73.53 14 4 No 8 1.65 Yes 0 0 No -30 0.76 Yes 50 95.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47671635 + NM_000251 MSH2 0 . . . 1.64 79.95 37 6 Yes 34 0.41 No 0 0 No -22 0.84 Yes 45 36.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94208073 - NM_005591 MRE11 0 . . . 10.66 80.43 22 4.88 No 73 -3.9 No 0 0 No -21 0.61 No 42 55.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68348734 + NM_133509 RAD51B 0 . . . 4.48 84 19 5.91 Yes 2 1.68 Yes 0 0 No -22 0.71 Yes 51 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190662483 + NM_000534 PMS1 0 . . . 1.84 62.73 23 5.69 Yes 68 0.12 No 0 0 No -28 0.47 No 24 61.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105194865 + NM_021930 RINT1 0 . . . 4.13 78.91 18 4.9 No 32 0.47 No 0 0 No -25 0.74 Yes 43 40.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59800521 - NM_032043 BRIP1 0 . . . 1.35 64.7 34 6.23 Yes 13 0.76 No 0 0 No -24 0.48 No 41 56.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6034515 - NM_000535 PMS2 0 . . . 4.08 85.72 17 5.29 No 71 0.76 No 0 0 No -25 0.34 No 47 80.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68814645 + NM_133509 RAD51B 0 . . . 0.39 77.69 32 6.16 Yes 48 -5.32 No 0 0 No -28 0.6 No 44 60.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152361055 - NM_005431 XRCC2 0 . . . 1.38 61.42 18 5.29 No 30 -3.72 No 0 0 No -21 0.57 No 56 35.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75512997 - NM_001040108 MLH3 0 . . . 1.54 74.54 31 6.61 Yes 7 0.13 No 0 0 No -20 0.42 No 49 38.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59855189 - NM_032043 BRIP1 0 . . . 1.41 71.8 39 6.63 Yes 61 1.06 Yes 0 0 No -20 0.57 No 44 44.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108216656 + NM_000051 ATM 0 . . . 2.5 76.31 19 5.12 No 6 1.18 Yes 0 0 No -23 0.56 No 45 74.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40993842 + NM_001164269 RAD51 0 . . . 6.86 85.07 19 6.48 Yes 59 1.24 Yes 0 0 No -18 0.47 No 38 76.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68467864 + NM_133509 RAD51B 0 . . . 0.91 0 37 6.27 Yes 58 0.41 No 0 0 No -36 0.53 No 48 38.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37062925 + NM_000249 MLH1 0 . . . 0.46 78.33 28 5.39 No 50 -4.78 No 0 0 No -27 0.66 No 45 37.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47725598 + NM_000251 MSH2 0 . . . 1.4 76.07 15 4.44 No 50 0.63 No 0 0 No -42 0.46 No 54 83.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68833438 + NM_133509 RAD51B 0 . . . 0.16 68.77 19 5.83 Yes 68 -5.85 No 0 0 No -30 0.49 No 50 17.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104177344 - NM_001100119 XRCC3 0 . . . 4.81 79.61 20 4.58 No 45 0.22 No 0 0 No -47 0.38 No 38 51.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69039127 + NM_133509 RAD51B 0 . . . 5.72 80.41 23 4.77 No 3 0.97 Yes 0 0 No -22 0.85 Yes 48 51.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68343828 + NM_133509 RAD51B 0 . . . 5.42 93.23 36 6.71 Yes 76 -1.81 No 0 0 No -23 0.55 No 47 74.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215597455 - NM_000465 BARD1 0 . . . 9.36 92.12 36 5.91 Yes 25 0.75 No 0 0 No -28 0.69 Yes 33 73.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215658309 - NM_000465 BARD1 0 . . . 0.79 0 19 5 No 48 0.99 Yes 0 0 No -23 0.75 Yes 55 56.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108129220 + NM_000051 ATM 0 . . . 7.86 91.01 34 5.74 Yes 21 0.89 Yes 0 0 No -33 0.63 No 45 64.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23631044 - NM_024675 PALB2 0 . . . 3.96 74.31 22 6.02 Yes 49 0.48 No 0 0 No -30 0.52 No 49 77.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68861011 + NM_133509 RAD51B 0 . . . 10.71 95.85 63 8.76 Yes 70 1.11 Yes 0 0 No -34 0.81 Yes 44 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68394639 + NM_133509 RAD51B 0 . . . 0.45 78.69 22 4.8 No 60 -0.95 No 0 0 No -21 0.96 Yes 47 69.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108120806 + NM_000051 ATM 0 . . . 1.86 83.69 22 6.16 Yes 56 -2.62 No 0 0 No -21 0.54 No 35 71.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108133112 + NM_000051 ATM 0 . . . 1.25 59.28 24 4.9 No 6 0.28 No 0 0 No -23 0.93 Yes 39 75.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68388620 + NM_133509 RAD51B 0 . . . 6.69 67.33 24 5.29 No 14 0.16 No 0 0 No -23 0.91 Yes 44 79.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21989151 - NM_000077 CDKN2A 0 . . . 4.93 75.78 27 5.2 No 15 0.91 Yes 0 0 No -53 0.78 Yes 43 87.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69074000 + NM_133509 RAD51B 0 . . . 4.46 79.37 22 7.3 Yes 24 1.02 Yes 0 0 No -21 0.7 Yes 34 89.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68304825 + NM_133509 RAD51B 0 . . . 1.61 69.11 17 4.4 No 34 1.63 Yes 0 0 No -22 0.77 Yes 44 85.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84395895 - NM_139076 FAM175A 0 . . . 1.07 65.36 34 5.83 Yes 46 -1.72 No 0 0 No -33 0.41 No 44 43.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52440199 - NM_004656 BAP1 0 . . . 11.92 81.97 13 4.36 No NA NA NA 0 0 No -33 0.85 Yes 47 64.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1224967 + NM_000455 STK11 0 . . . 4.77 75.08 24 4.32 No 41 1.7 Yes 0 0 No -23 0.62 No 17 39.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41249419 - NM_007294 BRCA1 0 . . . 0.81 65.71 19 4.8 No 42 1.28 Yes 0 0 No -26 0.41 No 44 44.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108183752 + NM_000051 ATM 0 . . . 6.2 78.45 19 4.34 No 16 1.29 Yes 0 0 No -38 0.53 No 42 81.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21979905 - NM_000077 CDKN2A 0 . . . 3.12 69.6 43 6.71 Yes 50 0.71 No 0 0 No -42 0.85 Yes 47 58.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56770961 + NM_058216 RAD51C 0 . . . 4.06 75.09 26 5.88 Yes 56 -2.61 No 0 0 No -25 0.58 No 30 45.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131957897 + NM_005732 RAD50 0 . . . 2.93 84.17 19 5 No 44 0.79 Yes 0 0 No -22 0.89 Yes 14 92.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47694027 + NM_000251 MSH2 0 . . . 2.18 67.84 28 5.57 Yes 42 1.47 Yes 0 0 No -27 0.85 Yes 44 76.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190740034 + NM_000534 PMS1 0 . . . 1.32 76.03 29 6.62 Yes 36 0.24 No 0 0 No -28 0.76 Yes 54 51.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29125869 - NM_001005735 CHEK2 0 . . . 5.28 76.79 27 5.2 No 11 2.13 Yes 0 0 No -24 0.46 No 47 85.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190662173 + NM_000534 PMS1 0 . . . 4.23 86.61 23 4.39 No 12 1.16 Yes 0 0 No -22 0.75 Yes 46 76.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41251197 - NM_007294 BRCA1 0 . . . 0.87 73.07 26 5.93 Yes 57 -2.05 No 0 0 No -22 0.61 No 43 53.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68432661 + NM_133509 RAD51B 0 . . . 2.65 72.12 38 7.47 Yes 76 -3.51 No 0 0 No -37 0.61 No 46 70.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32925063 + NM_000059 BRCA2 0 . . . 5.82 75.47 53 6.19 Yes 74 -3.7 No 0 0 No -27 0.73 Yes 47 36.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59827160 - NM_032043 BRIP1 0 . . . 0.79 71.17 31 4.42 No 73 -1.5 No 0 0 No -30 0.87 Yes 40 31.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37050760 + NM_000249 MLH1 0 . . . 5.14 81.87 25 3.78 No 33 -3.14 No 0 0 No -24 0.52 No 49 84.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68721402 + NM_133509 RAD51B 0 . . . 2.87 64.47 21 4.51 No 56 -3.02 No 0 0 No -23 0.57 No 34 71.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47634400 + NM_000251 MSH2 0 . . . 0.29 0 23 4.54 No 75 -4.86 No 0 0 No -51 0.38 No 41 50 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68564211 + NM_133509 RAD51B 0 . . . 3.54 74.3 22 5.29 No 9 0.45 No 0 0 No -21 0.71 Yes 49 82.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33439575 - NM_002878 RAD51D 0 . . . 5.07 75.1 18 5.94 Yes 6 0.24 No 0 0 No -33 0.74 Yes 44 61.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59818133 - NM_032043 BRIP1 0 . . . 6.99 79.26 26 4.59 No -1 1.41 Yes 0 0 No -25 0.32 No 47 90.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94200899 - NM_005591 MRE11 0 . . . 0.72 73.15 26 5.72 Yes 65 0.55 No 0 0 No -25 0.72 Yes 40 54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29109935 - NM_001005735 CHEK2 0 . . . 2.39 77.96 24 5.47 No 4 1.67 Yes 0 0 No -31 0.44 No 54 86.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33431094 - NM_002878 RAD51D 0 . . . 0.51 83.28 32 4.91 No 25 0.59 No 0 0 No -31 0.69 Yes 48 67.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47725565 + NM_000251 MSH2 0 . . . 6.19 87.19 18 4.79 No 72 1.72 Yes 0 0 No -21 0.49 No 34 67.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68512942 + NM_133509 RAD51B 0 . . . 0.47 71.95 53 9 Yes 59 1.45 Yes 0 0 No -52 0.72 Yes 42 86.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41005195 + NM_001164269 RAD51 0 . . . 2.49 84.22 25 4.2 No 8 0.21 No 0 0 No -24 0.86 Yes 50 58.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68623132 + NM_133509 RAD51B 0 . . . 0.12 0 34 6.92 Yes 64 1.11 Yes 0 0 No -30 0.26 No 58 62.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41249261 - NM_007294 BRCA1 0 . . . 2.11 82.07 23 5.64 Yes 28 1.11 Yes 0 0 No -22 0.48 No 51 81.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47763460 + NM_000251 MSH2 0 . . . 5.83 74.45 15 4.36 No 1 1.91 Yes 0 0 No -14 0.36 No 42 86.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32896092 + NM_000059 BRCA2 0 . . . 6.84 84.6 37 6.75 Yes 34 1.39 Yes 0 0 No -36 0.61 No 43 90.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90976307 - NM_002485 NBN 0 . . . 0.75 61.37 39 5.82 Yes 75 -6.76 No 0 0 No -27 0.56 No 51 59.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23614655 - NM_024675 PALB2 0 . . . 1.64 0 23 4.79 No 11 0.56 No 0 0 No -22 0.95 Yes 41 79.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215658142 - NM_000465 BARD1 0 . . . 4.75 83.18 22 5.29 No 5 0.87 Yes 0 0 No -21 0.73 Yes 43 87.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89664806 + NM_000314 PTEN 0 . . . 2.17 79.21 23 5.39 No 57 0.71 No 0 0 No -22 0.86 Yes 48 75.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32953071 + NM_000059 BRCA2 0 . . . 7.3 84.02 31 6.66 Yes 56 -0.84 No 0 0 No -26 0.75 Yes 48 44.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105202193 + NM_021930 RINT1 0 . . . 2.24 80.12 33 5.99 Yes 7 0.59 No 0 0 No -21 0.6 No 51 54.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32922682 + NM_000059 BRCA2 0 . . . 0.05 80.35 13 5.38 No 52 0.13 No 0 0 No -37 0.34 No 52 55.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108190916 + NM_000051 ATM 0 . . . 3.28 68.91 27 3.68 No 75 0.05 No 0 0 No -26 0.77 Yes 48 20.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41207085 - NM_007294 BRCA1 0 . . . 2.86 78.78 29 6.63 Yes 40 1.3 Yes 0 0 No -28 0.76 Yes 32 84.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90991369 - NM_002485 NBN 0 . . . 0.83 62.86 28 4.73 No 22 0.24 No 0 0 No -27 0.92 Yes 36 62.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68450700 + NM_133509 RAD51B 0 . . . 8.7 88.45 36 6.48 Yes 11 0.9 Yes 0 0 No -35 0.63 No 47 89.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215634534 - NM_000465 BARD1 0 . . . 0.11 0 17 6.48 Yes 13 0.97 Yes 0 0 No -16 0.72 Yes 45 89.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90963350 - NM_002485 NBN 0 . . . 2.22 73.63 16 4.65 No 30 1.13 Yes 0 0 No -18 0.8 Yes 41 79.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68432487 + NM_133509 RAD51B 0 . . . 5.5 75.12 18 5.66 Yes 15 0.49 No 0 0 No -17 0.35 No 43 54.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108182468 + NM_000051 ATM 0 . . . 1.74 68.99 28 6.31 Yes 32 -2.64 No 0 0 No -27 0.54 No 48 59.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59856918 - NM_032043 BRIP1 0 . . . 4.64 81.57 24 3.99 No 30 -1.95 No 0 0 No -26 0.54 No 44 70.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40997792 + NM_001164269 RAD51 0 . . . 4.21 66.42 28 3.96 No 27 -2.9 No 0 0 No -22 0.5 No 51 32.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108208774 + NM_000051 ATM 0 . . . 1.29 72.12 54 8.5 Yes 56 1.37 Yes 0 0 No -28 0.5 No 45 91.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68744235 + NM_133509 RAD51B 0 . . . 6.92 71.77 22 4.85 No -4 0.09 No 0 0 No -21 0.71 Yes 42 48.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94178613 - NM_005591 MRE11 0 . . . 1.79 65.89 20 5.52 No 47 0.59 No 0 0 No -29 0.73 Yes 42 53.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41252024 - NM_007294 BRCA1 0 . . . 7.19 89.7 17 5.99 Yes 46 0.32 No 0 0 No -23 0.61 No 40 71.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68491587 + NM_133509 RAD51B 0 . . . 5.34 71.6 25 4.72 No 57 1.21 Yes 0 0 No -24 0.69 Yes 36 85.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59939614 - NM_032043 BRIP1 0 . . . 2.32 71.73 18 5.83 Yes 17 0.86 Yes 0 0 No -33 0.54 No 30 54.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68455847 + NM_133509 RAD51B 0 . . . 6.59 91.8 46 6.66 Yes 18 1.4 Yes 0 0 No -20 0.77 Yes 44 60.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68791468 + NM_133509 RAD51B 0 . . . 2.75 72.19 20 5.47 No 64 1.25 Yes 0 0 No -23 0.77 Yes 46 74.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90974923 - NM_002485 NBN 0 . . . 2.19 67.45 30 7.81 Yes 63 1.6 Yes 0 0 No -29 0.93 Yes 52 56.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68902814 + NM_133509 RAD51B 0 . . . 4.5 84.6 14 5.59 Yes 45 0.1 No 0 0 No -27 0.47 No 49 75.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89683051 + NM_000314 PTEN 0 . . . 9.76 86.38 42 6.76 Yes 7 -1.18 No 0 0 No -26 0.75 Yes 51 65.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68713352 + NM_133509 RAD51B 0 . . . 6.62 84.03 39 4.32 No 0 0.72 No 0 0 No -23 0.91 Yes 51 65.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190677157 + NM_000534 PMS1 0 . . . 0.28 64.1 12 5.39 No 58 -3.76 No 0 0 No -26 0.3 No 41 23.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68980036 + NM_133509 RAD51B 0 . . . 3.32 82.5 10 4 No 65 -4.69 No 0 0 No -27 0.66 No 52 51.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190662270 + NM_000534 PMS1 0 . . . 5.05 83.43 22 5.29 No 68 0.71 No 0 0 No -21 0.73 Yes 52 67.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41263510 - NM_007294 BRCA1 0 . . . 2.31 77.68 34 6.54 Yes 2 1.43 Yes 0 0 No -34 0.67 Yes 44 57.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69053717 + NM_133509 RAD51B 0 . . . 3.08 81.28 41 7.06 Yes 69 -5.03 No 0 0 No -28 0.55 No 43 48.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152358058 - NM_005431 XRCC2 0 . . . 0.94 78.02 27 5.74 Yes 32 0.2 No 0 0 No -26 0.59 No 21 52.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68888716 + NM_133509 RAD51B 0 . . . 5 76.57 37 6.11 Yes -3 0.54 No 0 0 No -36 0.59 No 47 55.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131891554 + NM_005732 RAD50 0 . . . 0.83 51.87 20 7.14 Yes 27 0.56 No 0 0 No -19 0.62 No 37 60.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29103317 - NM_001005735 CHEK2 0 . . . 1.89 73.21 22 4.69 No 57 0.03 No 0 0 No -21 0.94 Yes 50 26.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47764835 + NM_000251 MSH2 0 . . . 7.05 67.73 41 7.04 Yes 53 0.64 No 0 0 No -44 0.41 No 37 38.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108167713 + NM_000051 ATM 0 . . . 0.42 0 18 3.42 No 35 -2.8 No 0 0 No -20 0.4 No 50 21.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69049851 + NM_133509 RAD51B 0 . . . 4.81 74.98 17 5.57 Yes 69 -4.76 No 0 0 No -24 0.83 Yes 38 80.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6033248 - NM_000535 PMS2 0 . . . 7.33 73.83 20 5.1 No 21 1.76 Yes 0 0 No -22 0.81 Yes 45 56.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215658569 - NM_000465 BARD1 0 . . . 3.09 80.93 28 5.39 No 56 0.51 No 0 0 No -30 0.85 Yes 39 73.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108216900 + NM_000051 ATM 0 . . . 9.19 84.59 19 4.51 No 62 -2.21 No 0 0 No -27 0.46 No 46 45.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68321063 + NM_133509 RAD51B 0 . . . 0.95 0 18 4.69 No 60 -5.62 No 0 0 No -56 0.93 Yes 49 29.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84390933 - NM_139076 FAM175A 0 . . . 2.24 74.82 23 6.92 Yes 19 0.76 No 0 0 No -29 0.41 No 39 63.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47721113 + NM_000251 MSH2 0 . . . 11.64 92 39 6.18 Yes 48 -2.6 No 0 0 No -36 0.81 Yes 49 55.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59764810 - NM_032043 BRIP1 0 . . . 4.28 74.54 36 5.23 No 76 -3.1 No 0 0 No -35 0.61 No 40 70.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68884197 + NM_133509 RAD51B 0 . . . 6.39 79.55 21 5.2 No 56 0.34 No 0 0 No -49 0.47 No 44 48.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59937084 - NM_032043 BRIP1 0 . . . 2.44 91.97 15 5.1 No 8 0.17 No 0 0 No -21 0.41 No 50 56.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52434102 - NM_004656 BAP1 0 . . . 4.61 62.93 31 5.55 No 18 1.03 Yes 0 0 No -30 0.63 No 40 80.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37048642 + NM_000249 MLH1 0 . . . 2.7 0 28 4.63 No 44 0.51 No 0 0 No -20 0.66 No 48 28.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68525451 + NM_133509 RAD51B 0 . . . 6.99 76.66 17 5.26 No 70 0.75 No 0 0 No -27 0.85 Yes 46 70.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47760480 + NM_000251 MSH2 0 . . . 3.11 68.63 22 5.24 No 45 -1.33 No 0 0 No -21 0.73 Yes 40 40.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47669043 + NM_000251 MSH2 0 . . . 1.78 80.12 30 5.05 No 7 1.1 Yes 0 0 No -29 0.67 Yes 51 75.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69123927 + NM_133509 RAD51B 0 . . . 3.32 73.2 22 5.18 No 61 0.47 No 0 0 No -26 0.73 Yes 45 66.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867467 - NM_032043 BRIP1 0 . . . 0.11 63.09 21 5.2 No 69 -6.13 No 0 0 No -20 0.46 No 47 59.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41022740 + NM_001164269 RAD51 0 . . . 4.74 84.41 49 7.71 Yes 25 0.33 No 0 0 No -36 0.76 Yes 33 74.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68390771 + NM_133509 RAD51B 0 . . . 5.84 75.58 34 6.24 Yes -2 0.8 Yes 0 0 No -23 0.65 No 46 54.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68415062 + NM_133509 RAD51B 0 . . . 1.49 68.51 17 6.34 Yes 39 0.46 No 0 0 No -16 0.71 Yes 43 37.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108237739 + NM_000051 ATM 0 . . . 1.74 0 12 5.2 No 30 1.72 Yes 0 0 No -28 0.32 No 28 87.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29091962 - NM_001005735 CHEK2 0 . . . 1.83 63.08 32 6.44 Yes 73 -6.88 No 0 0 No -31 0.74 Yes 45 84.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68780270 + NM_133509 RAD51B 0 . . . 2.73 79.64 22 6.67 Yes 52 0.41 No 0 0 No -29 0.47 No 53 76.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68735990 + NM_133509 RAD51B 0 . . . 6.07 86.37 70 8.8 Yes 62 0.14 No 0 0 No -31 0.43 No 50 62.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94226274 - NM_005591 MRE11 0 . . . 3.35 66.48 28 8.53 Yes 47 -4.87 No 0 0 No -27 0.65 No 51 53.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68704239 + NM_133509 RAD51B 0 . . . 2.87 72.88 23 5.39 No 6 1.13 Yes 0 0 No -22 0.19 No 43 68.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68691000 + NM_133509 RAD51B 0 . . . 0.88 69.66 16 4.83 No 59 0.26 No 0 0 No -23 0.75 Yes 35 44.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1220962 + NM_000455 STK11 0 . . . 7.35 80.85 25 5.75 Yes 47 -2.29 No 0 0 No -24 0.75 Yes 40 78.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68918173 + NM_133509 RAD51B 0 . . . 4.67 81.18 23 4.91 No 60 -5.93 No 0 0 No -22 0.89 Yes 44 92.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89672791 + NM_000314 PTEN 0 . . . 5.44 68.85 33 5.46 No 54 0.58 No 0 0 No -32 0.41 No 44 56.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108119960 + NM_000051 ATM 0 . . . 1.69 61.39 30 4.4 No 20 0.97 Yes 0 0 No -22 0.53 No 38 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68787844 + NM_133509 RAD51B 0 . . . 0.01 71.86 22 3.57 No 20 1.26 Yes 0 0 No -23 0.76 Yes 45 63.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75496053 - NM_001040108 MLH3 0 . . . 0.68 72.02 14 5.66 Yes 69 -5.99 No 0 0 No -25 0.43 No 44 32.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48036020 + NM_000179 MSH6 0 . . . 9.68 87.19 14 5.66 Yes 70 -2.74 No 0 0 No -23 0.35 No 47 82.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47798038 + NM_000251 MSH2 0 . . . 4.71 72.6 17 5.39 No 9 -0.44 No 0 0 No -16 0.64 No 49 74.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68773485 + NM_004360 CDH1 0 . . . 5.06 82.47 31 4.44 No 72 0.43 No 0 0 No -28 0.53 No 50 85.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104164171 - NM_001100119 XRCC3 0 . . . 2.32 72.95 27 5.44 No NA NA NA 0 0 No -23 0.47 No 57 27.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68571583 + NM_133509 RAD51B 0 . . . 1.18 71.75 19 5.6 Yes 57 0.74 No 0 0 No -26 0.59 No 51 69.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47705746 + NM_000251 MSH2 0 . . . 0.64 72.7 34 5.49 No 4 1.07 Yes 0 0 No -18 0.35 No 47 79.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68795888 + NM_133509 RAD51B 0 . . . 3.19 70.73 18 4.09 No 71 0.93 Yes 0 0 No -24 0.71 Yes 41 83.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56780387 + NM_058216 RAD51C 0 . . . 0.9 69.97 16 5.82 Yes 73 -6.09 No 0 0 No -30 0.59 No 27 40.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108176193 + NM_000051 ATM 0 . . . 2.84 77.14 26 5 No 53 0.61 No 0 0 No -21 0.58 No 52 70.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21975373 - NM_000077 CDKN2A 0 . . . 1.24 69.55 28 5.39 No 55 0.35 No 0 0 No -42 0.32 No 43 66.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190718568 + NM_000534 PMS1 0 . . . 2.36 73.8 29 6.55 Yes 8 1.08 Yes 0 0 No -28 0.78 Yes 44 63.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52439675 - NM_004656 BAP1 0 . . . 2.99 75.07 16 4.66 No 26 0.51 No 19 0.11 Yes -19 0.47 No 32 58.22 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 29113198 - NM_001005735 CHEK2 0 . . . 6.25 80.12 23 5.37 No 8 1.06 Yes 0 0 No -22 0.58 No 50 88.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68822660 + NM_133509 RAD51B 0 . . . 6.73 84.62 34 6.08 Yes 60 0.46 No 0 0 No -33 0.88 Yes 42 62.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131973436 + NM_005732 RAD50 0 . . . 0.42 74.73 19 4.79 No 34 1.18 Yes 0 0 No -18 0.41 No 24 43.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23623517 - NM_024675 PALB2 0 . . . 2.25 62.01 30 5.43 No 53 0.43 No 0 0 No -26 0.46 No 61 27.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68854935 + NM_004360 CDH1 0 . . . 2.72 70.85 22 4.07 No 61 0.9 Yes 0 0 No -21 0.57 No 53 71.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68369123 + NM_133509 RAD51B 0 . . . 3.19 64.22 27 6.51 Yes 63 -4.05 No 0 0 No -26 0.67 Yes 50 70.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69088339 + NM_133509 RAD51B 0 . . . 8.21 85.3 21 7.21 Yes 52 0.79 Yes 0 0 No -20 0.77 Yes 42 88.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68474915 + NM_133509 RAD51B 0 . . . 0.71 70.77 22 5.53 No 33 0.53 No 0 0 No -29 0.27 No 49 71.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68704922 + NM_133509 RAD51B 0 . . . 1.69 0 23 4.9 No 42 0.2 No 0 0 No -22 0.77 Yes 45 85.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68330754 + NM_133509 RAD51B 0 . . . 3.54 83.69 24 7.07 Yes 76 -2.83 No 0 0 No -23 0.84 Yes 63 27.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68717858 + NM_133509 RAD51B 0 . . . 7.49 85.84 49 5.24 No 14 0.91 Yes 0 0 No -30 0.64 No 44 71.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84388342 - NM_139076 FAM175A 0 . . . 1.44 75.09 16 5.18 No 66 0.24 No 0 0 No -57 0.4 No 41 43.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694874 + NM_000534 PMS1 0 . . . 7.67 0 13 5.87 Yes 12 -1.86 No 0 0 No -22 0.6 No 46 64.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32893346 + NM_000059 BRCA2 0 . . . 2.29 62.49 13 5.2 No 61 -4.36 No 0 0 No -17 0.6 No 42 48.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37077650 + NM_000249 MLH1 0 . . . 0.41 69.31 106 8.38 Yes 18 0.09 No 0 0 No -21 0.67 Yes 44 43.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152372698 - NM_005431 XRCC2 0 . . . 5.54 88.57 16 5.04 No 76 -2.46 No 0 0 No -45 0.52 No 45 55.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68438232 + NM_133509 RAD51B 0 . . . 1.3 67.12 36 7.75 Yes 47 1.89 Yes 0 0 No -35 0.94 Yes 11 66.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69014370 + NM_133509 RAD51B 0 . . . 9.48 81.39 25 4.6 No 47 -0.64 No 0 0 No -24 0.73 Yes 20 38.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59932772 - NM_032043 BRIP1 0 . . . 4.53 84.47 27 6.59 Yes 8 1.06 Yes 0 0 No -26 0.91 Yes 50 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68509650 + NM_133509 RAD51B 0 . . . 3.29 75.17 18 4.48 No 20 1.45 Yes 0 0 No -26 0.39 No 38 59.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47696420 + NM_000251 MSH2 0 . . . 2.72 65.23 22 4.9 No 20 1.36 Yes 0 0 No -21 0.81 Yes 38 90.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68305511 + NM_133509 RAD51B 0 . . . 3.65 69.18 36 5.72 Yes 23 0.83 Yes 0 0 No -25 0.68 Yes 50 60.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59836773 - NM_032043 BRIP1 0 . . . 6.92 83.91 14 6.18 Yes 9 0.75 No 0 0 No -24 0.63 No 49 66.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108176567 + NM_000051 ATM 0 . . . 1.87 70.32 11 3.22 No 1 0.45 No 0 0 No -57 0.59 No 51 56.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21981388 - NM_000077 CDKN2A 0 . . . 0.93 0 30 5.64 Yes 5 0.44 No 0 0 No -22 0.7 Yes 33 59.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68861421 + NM_004360 CDH1 0 . . . 1.06 68.31 16 4.33 No 2 1.53 Yes 0 0 No -27 0.2 No 38 30.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152366754 - NM_005431 XRCC2 0 . . . 2.62 77.96 16 5.26 No 4 1.36 Yes 0 0 No -21 0.51 No 54 83.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41221959 - NM_007294 BRCA1 0 . . . 0.68 61.57 15 5.39 No 53 -1.9 No 0 0 No -28 0.26 No 42 27.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32897145 + NM_000059 BRCA2 0 . . . 0.3 75.56 15 5.39 No 67 -2.15 No 0 0 No -22 0.6 No 54 64.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94182521 - NM_005591 MRE11 0 . . . 5.05 77.6 14 4.33 No 9 1.1 Yes 0 0 No -28 0.34 No 49 62.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37051364 + NM_000249 MLH1 0 . . . 1.01 71.93 18 4.58 No 41 0.02 No 0 0 No -17 0.69 Yes 17 38.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48031912 + NM_000179 MSH6 0 . . . 1.34 69.62 20 5.1 No 69 1.63 Yes 0 0 No -51 0.73 Yes 33 72.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105201149 + NM_021930 RINT1 0 . . . 0.23 66.18 21 6.83 Yes 43 -4.79 No 0 0 No -20 0.63 No 54 56.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47769014 + NM_000251 MSH2 0 . . . 0.21 0 12 4.69 No 50 0.45 No 0 0 No -15 0.25 No 37 60.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190717798 + NM_000534 PMS1 0 . . . 3.88 83 19 5 No 65 0.43 No 0 0 No -18 0.52 No 37 79.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23650835 - NM_024675 PALB2 0 . . . 7.63 83.21 28 3.34 No 73 0.95 Yes 0 0 No -28 0.65 No 38 88.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69082428 + NM_133509 RAD51B 0 . . . 3.43 76.44 29 5.09 No 53 0.32 No 0 0 No -28 0.19 No 21 70.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68776747 + NM_004360 CDH1 0 . . . 3.49 80.4 32 7.87 Yes 75 -4.83 No 0 0 No -31 0.84 Yes 43 63.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89667053 + NM_000314 PTEN 0 . . . 6.16 87.23 35 5.35 No 70 0.87 Yes 0 0 No -24 0.59 No 49 72.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69094329 + NM_133509 RAD51B 0 . . . 1.78 67.1 18 5.35 No 1 1.55 Yes 0 0 No -26 0.52 No 47 39.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195318 + NM_000051 ATM 0 . . . 1.8 78.06 34 5.4 No 4 0.18 No 0 0 No -45 0.58 No 42 34.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68518085 + NM_133509 RAD51B 0 . . . 5.83 78.07 26 4.85 No 2 0.87 Yes 0 0 No -19 0.23 No 37 61.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108114348 + NM_000051 ATM 0 . . . 3.44 67 26 5.87 Yes 52 -2.09 No 0 0 No -30 0.52 No 48 26.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29124956 - NM_001005735 CHEK2 0 . . . 4.37 0 18 5.15 No 69 0.35 No 0 0 No -28 0.5 No 36 81.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190720642 + NM_000534 PMS1 0 . . . 6.56 79.61 17 5.83 Yes 69 -5.39 No 0 0 No -27 0.38 No 45 37.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23638643 - NM_024675 PALB2 0 . . . 5.2 85.02 39 4.65 No 72 1.17 Yes 0 0 No -25 0.54 No 53 81.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69123533 + NM_133509 RAD51B 0 . . . 2.32 80.92 25 5.2 No 4 1.16 Yes 0 0 No -24 0.84 Yes 54 25.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131926219 + NM_005732 RAD50 0 . . . 6.69 90.77 33 6.56 Yes 66 0.42 No 0 0 No -32 0.49 No 46 56.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94154231 - NM_005591 MRE11 0 . . . 3.32 67.63 12 4.24 No 26 1.23 Yes 0 0 No -43 0.42 No 32 48.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68726025 + NM_133509 RAD51B 0 . . . 2.83 71.71 28 6.24 Yes 61 1.01 Yes 0 0 No -27 0.54 No 44 51.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29123522 - NM_001005735 CHEK2 0 . . . 2.08 63 15 5.57 Yes 63 0.55 No 0 0 No -28 0.28 No 46 66.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68305821 + NM_133509 RAD51B 0 . . . 3.56 69.98 30 6.04 Yes -3 0.58 No 0 0 No -29 0.6 No 16 73.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68848434 + NM_004360 CDH1 0 . . . 2.09 65.8 16 4.95 No 70 -4.43 No 0 0 No -26 0.35 No 46 56.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68649790 + NM_133509 RAD51B 0 . . . 0.27 0 16 5.64 Yes 25 1.56 Yes 0 0 No -28 0.48 No 33 87.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33447895 - NM_002878 RAD51D 0 . . . 1.31 82.33 22 5.8 Yes 71 0.17 No 0 0 No -21 0.42 No 50 29.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68947871 + NM_133509 RAD51B 0 . . . 7.87 83.42 21 5.09 No 6 1.12 Yes 0 0 No -24 0.63 No 28 33.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69084987 + NM_133509 RAD51B 0 . . . 1.63 72.63 19 4.98 No -4 1.82 Yes 0 0 No -18 0.62 No 44 52.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59864555 - NM_032043 BRIP1 0 . . . 5.11 78.07 22 5.18 No 13 0.08 No 0 0 No -21 0.72 Yes 45 42.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68573255 + NM_133509 RAD51B 0 . . . 1.84 62.4 22 5.29 No 22 -2.8 No 0 0 No -21 0.73 Yes 45 39.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69043920 + NM_133509 RAD51B 0 . . . 2.9 70.7 35 6.96 Yes 46 1.33 Yes 0 0 No -34 0.7 Yes 60 57.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68868391 + NM_133509 RAD51B 0 . . . 1.93 74.43 23 4.7 No 45 1.25 Yes 0 0 No -23 0.54 No 42 54.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41255317 - NM_007294 BRCA1 0 . . . 1.62 73.84 30 5.77 Yes 7 1.04 Yes 0 0 No -30 0.56 No 51 79.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108096302 + NM_000051 ATM 0 . . . 2.61 68.36 23 6.03 Yes 16 1.65 Yes 0 0 No -22 0.79 Yes 42 91.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59922773 - NM_032043 BRIP1 0 . . . 0.54 64.64 16 4.69 No 60 0.68 No 0 0 No -18 0.39 No 53 48.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69007054 + NM_133509 RAD51B 0 . . . 1.32 0 20 4.8 No 58 -3.51 No 0 0 No -18 0.31 No 54 61.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68767795 + NM_133509 RAD51B 0 . . . 8.02 77.09 45 6.92 Yes 51 0.72 No 0 0 No -44 0.52 No 48 76.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56802499 + NM_058216 RAD51C 0 . . . 4.33 59.97 26 6.76 Yes 67 0.51 No 0 0 No -25 0.73 Yes 38 94.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68785139 + NM_004360 CDH1 0 . . . 1.34 75.24 15 5.23 No 10 1.11 Yes 0 0 No -50 0.62 No 48 55.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59914069 - NM_032043 BRIP1 0 . . . 7.97 91.5 25 6.33 Yes 20 0.62 No 0 0 No -24 0.94 Yes 38 82.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75504071 - NM_001040108 MLH3 0 . . . 2.66 59.58 21 3.9 No 42 -3.8 No 0 0 No -20 0.91 Yes 50 57.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89732580 + NM_000314 PTEN 0 . . . 1.58 61.8 20 8.22 Yes 71 -5.48 No 0 0 No -23 0.46 No 53 77.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68674252 + NM_133509 RAD51B 0 . . . 0.19 67.03 31 4.93 No 46 -5.14 No 0 0 No -30 0.83 Yes 46 60.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90977763 - NM_002485 NBN 0 . . . 1.21 81.5 42 6.86 Yes 15 0.1 No 0 0 No -42 0.53 No 47 62.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69050193 + NM_133509 RAD51B 0 . . . 0.92 62.99 27 5.2 No 64 -5.01 No 0 0 No -20 0.39 No 54 59.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69134003 + NM_133509 RAD51B 0 . . . 0.39 82.68 19 4.15 No 44 0.94 Yes 0 0 No -30 0.86 Yes 48 90.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41263233 - NM_007294 BRCA1 0 . . . 2.04 72.82 13 4.36 No 3 0.8 Yes 0 0 No -27 0.36 No 44 64.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59778219 - NM_032043 BRIP1 0 . . . 1.67 81.58 23 5.39 No 26 0.35 No 0 0 No -22 0.69 Yes 47 48.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69027987 + NM_133509 RAD51B 0 . . . 5.17 70.08 37 5.45 No 38 -3.36 No 0 0 No -22 0.73 Yes 48 36.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89691600 + NM_000314 PTEN 0 . . . 6.78 75.19 16 4.69 No 27 0.41 No 0 0 No -18 0.76 Yes 31 92.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21985505 - NM_000077 CDKN2A 0 . . . 3.28 70.71 13 5.24 No 45 0.64 No 0 0 No -25 0.94 Yes 45 91.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45798450 - NM_001048171 MUTYH 0 . . . 2.6 74.07 26 6.08 Yes 58 1.45 Yes 0 0 No -25 0.66 No 47 33.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69094813 + NM_133509 RAD51B 0 . . . 4.34 81.14 36 5.66 Yes 7 -0.82 No 0 0 No -25 0.59 No 48 82.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94221566 - NM_005591 MRE11 0 . . . 1.12 0 21 5.29 No 65 0.52 No 0 0 No -20 0.94 Yes 39 31.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68378479 + NM_133509 RAD51B 0 . . . 0.92 61.81 28 5.78 Yes 52 0.12 No 0 0 No -27 0.73 Yes 47 79.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215615670 - NM_000465 BARD1 0 . . . 3.34 78.22 14 5.39 No 38 0.96 Yes 0 0 No -30 0.58 No 46 71.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68396185 + NM_133509 RAD51B 0 . . . 2.79 69.08 15 5.47 No 37 0.88 Yes 0 0 No -23 0.6 No 49 55.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32934007 + NM_000059 BRCA2 0 . . . 3.51 83.1 40 6.39 Yes 64 0.28 No 0 0 No -29 0.46 No 47 71.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41008774 + NM_001164269 RAD51 0 . . . 1.56 80.15 50 7.33 Yes 33 1.36 Yes 0 0 No -26 0.91 Yes 25 50.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29132081 - NM_001005735 CHEK2 0 . . . 4.27 71.07 23 5.78 Yes 74 -3.79 No 0 0 No -22 0.82 Yes 43 83.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94227195 - NM_005591 MRE11 0 . . . 1.85 71.36 25 6.03 Yes 59 -4.51 No 0 0 No -24 0.87 Yes 54 53.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68743458 + NM_133509 RAD51B 0 . . . 2.54 80.37 17 5.68 Yes 24 -2.93 No 0 0 No -25 0.83 Yes 48 85.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32890843 + NM_000059 BRCA2 0 . . . 0.14 62.21 17 6.08 Yes 64 0.6 No 0 0 No -16 0.82 Yes 26 48.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68955178 + NM_133509 RAD51B 0 . . . 6.19 71.1 20 5.1 No 28 1.27 Yes 0 0 No -19 0.72 Yes 30 62.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59903680 - NM_032043 BRIP1 0 . . . 6.8 83.93 27 5.08 No 14 0.13 No 0 0 No -26 0.59 No 38 90.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56792878 + NM_058216 RAD51C 0 . . . 8.55 79.19 20 3.37 No 12 0.53 No 0 0 No -19 0.63 No 46 52.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21993042 - NM_000077 CDKN2A 0 . . . 1.45 67.3 18 4.81 No 32 0.9 Yes 0 0 No -23 0.69 Yes 38 51.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56777984 + NM_058216 RAD51C 0 . . . 4.03 82.77 19 6.42 Yes 3 1.76 Yes 0 0 No -23 0.4 No 44 52.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29102262 - NM_001005735 CHEK2 0 . . . 3.89 87.81 32 6.16 Yes 13 0.03 No 0 0 No -31 0.88 Yes 45 83.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59925395 - NM_032043 BRIP1 0 . . . 4.11 83.93 16 5.38 No 28 1.14 Yes 0 0 No -28 0.48 No 42 97.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68854689 + NM_004360 CDH1 0 . . . 5.27 72.02 19 4.88 No 53 -2.89 No 0 0 No -18 0.44 No 52 38.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94154008 - NM_005591 MRE11 0 . . . 3.16 72.26 31 6.08 Yes -2 0.17 No 0 0 No -23 0.32 No 17 43.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68419022 + NM_133509 RAD51B 0 . . . 0.56 65.14 10 4.9 No 20 0.47 No 0 0 No -24 0.48 No 42 48.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59881121 - NM_032043 BRIP1 0 . . . 5.53 75.63 48 7.74 Yes 50 -2.21 No 0 0 No -45 0.35 No 41 87.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69057863 + NM_133509 RAD51B 0 . . . 3.72 85.04 35 6.06 Yes 47 0.58 No 0 0 No -29 0.64 No 48 77.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68371576 + NM_133509 RAD51B 0 . . . 11.55 89.87 13 7.45 Yes 59 0.46 No 0 0 No -53 0.3 No 42 85.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215638401 - NM_000465 BARD1 0 . . . 4.81 76.1 18 4.43 No 0 0.75 No 0 0 No -25 0.86 Yes 44 68.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47754310 + NM_000251 MSH2 0 . . . 1.81 79.81 33 6.24 Yes 57 0.72 No 0 0 No -32 0.68 Yes 51 42.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108235055 + NM_000051 ATM 0 . . . 4.31 82 14 4.47 No 7 1.22 Yes 0 0 No -13 0.42 No 51 78.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59884512 - NM_032043 BRIP1 0 . . . 0.74 75.11 28 5.81 Yes 45 0.15 No 0 0 No -27 0.46 No 48 46.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84382319 - NM_139076 FAM175A 0 . . . 5.72 71.57 24 5.39 No 32 1.09 Yes 0 0 No -23 0.71 Yes 40 72.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68503371 + NM_133509 RAD51B 0 . . . 5.94 82.63 20 6 Yes 30 0.27 No 0 0 No -29 0.68 Yes 34 34.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68363093 + NM_133509 RAD51B 0 . . . 3.93 73.82 35 5.91 Yes 54 0.61 No 0 0 No -34 0.35 No 47 53.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674648 + NM_000251 MSH2 0 . . . 5.5 86.51 27 5.06 No 38 1.09 Yes 0 0 No -26 0.65 No 48 45.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47775167 + NM_000251 MSH2 0 . . . 2.49 69.33 26 5.2 No 10 0.29 No 0 0 No -25 0.85 Yes 48 97.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68415206 + NM_133509 RAD51B 0 . . . 4.41 73.7 41 5.16 No 12 -0.9 No 0 0 No -25 0.85 Yes 46 92.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68292266 + NM_133509 RAD51B 0 . . . 0.52 72.37 15 6.45 Yes 44 -3.7 No 0 0 No -31 0.83 Yes 48 60.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75514048 - NM_001040108 MLH3 0 . . . 2.1 82.31 43 9.66 Yes 72 -5.37 No 0 0 No -42 0.71 Yes 45 62.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68964146 + NM_133509 RAD51B 0 . . . 1.78 70.84 15 5.23 No 3 0.36 No 0 0 No -27 0.35 No 36 35.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68913270 + NM_133509 RAD51B 0 . . . 0.03 70.85 10 4 No 37 1.07 Yes 0 0 No -32 0.59 No 51 43.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68469997 + NM_133509 RAD51B 0 . . . 7.88 85.81 20 5.48 No 27 0.85 Yes 0 0 No -23 0.51 No 43 82.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108110635 + NM_000051 ATM 0 . . . 3.05 77.84 18 3.75 No 3 1.15 Yes 0 0 No -27 0.58 No 44 49.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68980338 + NM_133509 RAD51B 0 . . . 5.46 0 16 5.48 No 20 1.04 Yes 0 0 No -23 0.43 No 38 80.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152373577 - NM_005431 XRCC2 0 . . . 2.86 67.04 14 3.87 No 56 -1.63 No 0 0 No -37 0.58 No 20 51.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68674550 + NM_133509 RAD51B 0 . . . 7.25 67.03 21 4.01 No 15 0.05 No 0 0 No -26 0.58 No 43 69.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75508151 - NM_001040108 MLH3 0 . . . 1.52 83.64 23 5.13 No 27 1.44 Yes 0 0 No -22 0.82 Yes 26 58.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68468083 + NM_133509 RAD51B 0 . . . 9.07 86.68 16 5.14 No 32 0.28 No 0 0 No -20 0.52 No 48 79.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90976899 - NM_002485 NBN 0 . . . 0.1 69.84 24 4.77 No 41 -4.11 No 0 0 No -23 0.54 No 42 52.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69141283 + NM_133509 RAD51B 0 . . . 9.41 82.64 39 7.43 Yes 24 0.36 No 0 0 No -38 0.44 No 39 54.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105206333 + NM_021930 RINT1 0 . . . 7.89 84.77 17 5.29 No 11 0.21 No 0 0 No -24 0.74 Yes 43 46.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21988780 - NM_000077 CDKN2A 0 . . . 2.22 68.32 26 5.14 No 49 0.99 Yes 0 0 No -25 0.9 Yes 46 84.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69029416 + NM_133509 RAD51B 0 . . . 0.37 71.74 21 4.88 No -3 1.09 Yes 0 0 No -20 0.72 Yes 44 27.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108103392 + NM_000051 ATM 0 . . . 1.08 0 25 6.67 Yes 40 1.17 Yes 0 0 No -24 0.48 No 18 68.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190655633 + NM_000534 PMS1 0 . . . 0.51 0 20 4.26 No 51 -5.42 No 0 0 No -23 0.64 No 51 59.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40994100 + NM_001164269 RAD51 0 . . . 1.41 84.22 42 6.29 Yes 3 0.7 No 0 0 No -22 0.78 Yes 50 61.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84384821 - NM_139076 FAM175A 0 . . . 3.03 71.59 26 5.6 Yes 12 0.57 No 0 0 No -25 0.48 No 39 64.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37081729 + NM_000249 MLH1 0 . . . 4.39 71.79 9 3.87 No 74 1.53 Yes 0 0 No -28 0.97 Yes 38 76.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94215508 - NM_005591 MRE11 0 . . . 3.35 63.64 25 6.06 Yes 48 -4.81 No 0 0 No -24 0.64 No 40 60.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6032835 - NM_000535 PMS2 0 . . . 2.12 74.01 30 5.57 Yes 7 1.12 Yes 0 0 No -29 0.8 Yes 51 59.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90984792 - NM_002485 NBN 0 . . . 6.7 81.85 14 6.52 Yes -3 0.96 Yes 0 0 No -22 0.62 No 32 64.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68676858 + NM_133509 RAD51B 0 . . . 3.6 85.02 20 5.1 No 4 1.05 Yes 0 0 No -41 0.75 Yes 54 74.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68517388 + NM_133509 RAD51B 0 . . . 7.28 84.29 11 4.12 No 12 0.8 Yes 0 0 No -35 0.69 Yes 46 94.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68555219 + NM_133509 RAD51B 0 . . . 12.48 92.26 16 5.04 No 37 2.33 Yes 0 0 No -20 0.67 Yes 28 57.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37069991 + NM_000249 MLH1 0 . . . 2.36 74.24 26 4.76 No 54 -5.23 No 0 0 No -26 0.47 No 60 47.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108102242 + NM_000051 ATM 0 . . . 0.41 65.84 18 5.57 Yes 72 -4.02 No 0 0 No -24 0.79 Yes 51 25.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108116596 + NM_000051 ATM 0 . . . 2.86 84 40 6.78 Yes 2 1.5 Yes 0 0 No -33 0.32 No 16 77.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68802505 + NM_004360 CDH1 0 . . . 1.04 68.39 17 5.66 Yes 61 -5.74 No 0 0 No -43 0.29 No 52 60.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1230047 + NM_000455 STK11 0 . . . 3.5 73.9 33 6.24 Yes 72 -2.85 No 0 0 No -32 0.9 Yes 18 39.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84400411 - NM_139076 FAM175A 0 . . . 0.25 68.06 48 6.89 Yes 48 0.35 No 0 0 No -34 0.68 Yes 46 39.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68704497 + NM_133509 RAD51B 0 . . . 6.31 86.67 34 7.53 Yes 43 0.63 No 0 0 No -33 0.74 Yes 15 93.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41243409 - NM_007294 BRCA1 0 . . . 2.8 0 14 5.38 No 61 -3.14 No 0 0 No -22 0.57 No 34 71.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69106054 + NM_133509 RAD51B 0 . . . 1.04 67.97 17 7.01 Yes 33 0.49 No 0 0 No -16 0.79 Yes 49 53.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59805902 - NM_032043 BRIP1 0 . . . 3.2 76.92 32 7.66 Yes 47 0.41 No 0 0 No -31 0.32 No 46 72.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37059733 + NM_000249 MLH1 0 . . . 2.06 76.63 16 4.24 No 58 -3.88 No 0 0 No -20 0.55 No 48 83.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68392965 + NM_133509 RAD51B 0 . . . 3.83 75.3 30 5.92 Yes 34 1.44 Yes 0 0 No -29 0.56 No 24 52.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59828179 - NM_032043 BRIP1 0 . . . 3.36 77.59 21 5.92 Yes 2 0.84 Yes 0 0 No -20 0.89 Yes 49 65.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21988831 - NM_000077 CDKN2A 0 . . . 2.48 70.37 27 4.36 No -2 1.05 Yes 0 0 No -27 0.51 No 40 54.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68676154 + NM_133509 RAD51B 0 . . . 4.81 86.6 35 6.32 Yes 51 1.51 Yes 0 0 No -22 0.6 No 50 53.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108102092 + NM_000051 ATM 0 . . . 6.73 81.42 16 4.69 No 62 -2.69 No 0 0 No -51 0.33 No 47 88.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69110815 + NM_133509 RAD51B 0 . . . 12.36 95.57 23 5.1 No 51 1.46 Yes 0 0 No -22 0.63 No 43 47.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56790671 + NM_058216 RAD51C 0 . . . 4.47 71.23 28 6.48 Yes 21 1.13 Yes 0 0 No -27 0.92 Yes 37 58.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68664359 + NM_133509 RAD51B 0 . . . 7.7 90.82 9 5.48 No 3 0.26 No 0 0 No -21 0.38 No 46 50.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131931162 + NM_005732 RAD50 0 . . . 2.93 69.7 19 5 No 68 0.42 No 0 0 No -27 0.37 No 44 55.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45793005 - NM_001048171 MUTYH 0 . . . 0.53 0 25 5.25 No 20 -0.73 No 0 0 No -24 0.61 No 57 33.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89709568 + NM_000314 PTEN 0 . . . 1.66 60.36 16 4.58 No 43 0.61 No 0 0 No -22 0.72 Yes 32 90.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68522281 + NM_133509 RAD51B 0 . . . 5.85 76.48 20 7.14 Yes 7 0.31 No 0 0 No -19 0.84 Yes 44 63.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190719658 + NM_000534 PMS1 0 . . . 0.26 59.46 25 4.93 No 54 0.35 No 0 0 No -24 0.91 Yes 49 56.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94208031 - NM_005591 MRE11 0 . . . 1.4 67.92 16 4.75 No 73 -0.97 No 0 0 No -28 0.52 No 42 73.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152374945 - NM_005431 XRCC2 0 . . . 6.12 87.79 28 5.28 No 68 -4.17 No 0 0 No -27 0.61 No 51 52.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105192890 + NM_021930 RINT1 0 . . . 2 0 28 5 No 12 0.37 No 0 0 No -47 0.39 No 46 82.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68948367 + NM_133509 RAD51B 0 . . . 10.89 90.83 30 5.73 Yes 69 0.64 No 0 0 No -19 0.46 No 36 95.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68289326 + NM_133509 RAD51B 0 . . . 3.53 77.82 24 5.38 No 22 -2.56 No 0 0 No -28 0.89 Yes 54 55.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105179852 + NM_021930 RINT1 0 . . . 5.41 90.92 40 7.71 Yes 72 1.05 Yes 0 0 No -39 0.57 No 16 70.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69090422 + NM_133509 RAD51B 0 . . . 3.48 67.23 15 4.58 No 17 0.33 No 0 0 No -39 0.54 No 38 60.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69062436 + NM_133509 RAD51B 0 . . . 0.51 56.71 29 7.35 Yes 73 -6.31 No 0 0 No -28 0.9 Yes 47 51.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29102478 - NM_001005735 CHEK2 0 . . . 3.77 80.22 28 5.7 Yes 8 0.64 No 0 0 No -27 0.5 No 47 62.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68412847 + NM_133509 RAD51B 0 . . . 0.01 77.68 19 6.08 Yes 61 -5.35 No 0 0 No -31 0.47 No 46 49.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68563931 + NM_133509 RAD51B 0 . . . 5.4 79.83 12 4.9 No 24 0.6 No 0 0 No -50 0.31 No 49 66.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68493248 + NM_133509 RAD51B 0 . . . 3.85 79.65 18 5.84 Yes 39 1.05 Yes 0 0 No -21 0.8 Yes 35 41.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33439295 - NM_002878 RAD51D 0 . . . 2.79 73.43 18 5.78 Yes 70 -4.36 No 0 0 No -23 0.72 Yes 51 27.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75487258 - NM_001040108 MLH3 0 . . . 6.16 87.22 21 5.93 Yes 17 0.81 Yes 0 0 No -29 0.43 No 41 87.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29084883 - NM_001005735 CHEK2 0 . . . 0.8 76.93 17 6.48 Yes 61 -4.72 No 0 0 No -22 0.48 No 56 20.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131967022 + NM_005732 RAD50 0 . . . 1.42 74.73 17 4.58 No 33 1.15 Yes 0 0 No -37 0.6 No 17 46.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23635581 - NM_024675 PALB2 0 . . . 3.49 73.11 24 5.1 No 63 0.13 No 0 0 No -21 0.59 No 39 71.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90951732 - NM_002485 NBN 0 . . . 8.49 75.57 31 6.57 Yes 41 0.57 No 0 0 No -30 0.85 Yes 39 84.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68673432 + NM_133509 RAD51B 0 . . . 0.31 69.78 28 4.81 No 13 1.2 Yes 0 0 No -27 0.7 Yes 45 70.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68415186 + NM_133509 RAD51B 0 . . . 1.09 80.26 32 6.15 Yes 25 -0.86 No 0 0 No -31 0.5 No 33 53.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41245834 - NM_007294 BRCA1 0 . . . 2.52 71.66 46 6.75 Yes -3 1.29 Yes 0 0 No -29 0.41 No 43 30.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152342635 - NM_005431 XRCC2 0 . . . 8.45 83.37 28 5.92 Yes -1 0.2 No 0 0 No -27 0.48 No 43 37.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90951631 - NM_002485 NBN 0 . . . 5.26 67.5 15 5.39 No 46 2.39 Yes 0 0 No -24 0.28 No 12 89.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68802885 + NM_004360 CDH1 0 . . . 4.62 70.75 29 5.9 Yes 36 1.63 Yes 0 0 No -28 0.77 Yes 22 84.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47792671 + NM_000251 MSH2 0 . . . 0.21 0 32 5.83 Yes 43 0.55 No 0 0 No -27 0.43 No 46 45.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47751106 + NM_000251 MSH2 0 . . . 6.94 82.09 28 5.29 No 37 0.56 No 0 0 No -57 0.55 No 43 89.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75488960 - NM_001040108 MLH3 0 . . . 1.12 82.7 25 5.2 No 41 -4.98 No 0 0 No -24 0.61 No 46 78.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68556237 + NM_133509 RAD51B 0 . . . 1.53 68.34 38 6.32 Yes 73 1.3 Yes 0 0 No -23 0.9 Yes 40 74.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84390737 - NM_139076 FAM175A 0 . . . 3.37 73.88 50 7 Yes 51 0.85 Yes 0 0 No -19 0.43 No 43 66.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47687472 + NM_000251 MSH2 0 . . . 5.19 74.52 34 4.84 No 23 0.59 No 0 0 No -23 0.52 No 31 93.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190736296 + NM_000534 PMS1 0 . . . 5.84 82.62 12 4.99 No 67 1.29 Yes 0 0 No -19 0.27 No 42 65.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29083805 - NM_001005735 CHEK2 0 . . . 7 84.2 14 4.88 No 29 1.18 Yes 0 0 No -21 0.86 Yes 29 83.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68800675 + NM_004360 CDH1 0 . . . 2.71 84.79 19 4.9 No 2 1.51 Yes 0 0 No -59 0.54 No 46 64.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190730037 + NM_000534 PMS1 0 . . . 1.3 0 39 6.5 Yes 2 1.06 Yes 0 0 No -23 0.48 No 28 53.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215665658 - NM_000465 BARD1 0 . . . 4.4 71.41 9 4.9 No 9 1.26 Yes 0 0 No -25 0.66 No 49 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47715943 + NM_000251 MSH2 0 . . . 4.21 82.93 16 5.56 Yes 59 -4.52 No 0 0 No -24 0.79 Yes 48 63.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59880387 - NM_032043 BRIP1 0 . . . 3.45 69.94 14 4.47 No 72 -3.32 No 0 0 No -37 0.36 No 45 62.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52435689 - NM_004656 BAP1 0 . . . 0.47 62.89 21 7.21 Yes 46 0.21 No 0 0 No -20 0.81 Yes 46 23.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68761474 + NM_133509 RAD51B 0 . . . 7.55 72.08 23 5.73 Yes 50 1.39 Yes 0 0 No -22 0.52 No 39 47.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215647632 - NM_000465 BARD1 0 . . . 2.08 71.78 15 5.16 No 36 0.83 Yes 0 0 No -25 0.76 Yes 44 63.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68789851 + NM_004360 CDH1 0 . . . 7.73 83.48 23 7.33 Yes 74 0.01 No 0 0 No -22 0.82 Yes 50 61.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69054883 + NM_133509 RAD51B 0 . . . 0.44 73.11 29 5.74 Yes 11 1.38 Yes 0 0 No -28 0.9 Yes 47 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59768310 - NM_032043 BRIP1 0 . . . 0.95 75.56 16 5.74 Yes 74 1 Yes 0 0 No -55 0.84 Yes 53 75.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23613699 - NM_024675 PALB2 0 . . . 5.01 81.41 34 6.12 Yes 63 1.39 Yes 0 0 No -33 0.95 Yes 51 77.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68843208 + NM_133509 RAD51B 0 . . . 0.9 69.34 35 5.11 No -4 0.76 No 0 0 No -34 0.79 Yes 42 22.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21983268 - NM_000077 CDKN2A 0 . . . 8.91 90.85 19 5.92 Yes 34 0.45 No 0 0 No -29 0.45 No 24 64.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47755069 + NM_000251 MSH2 0 . . . 4.74 82.88 27 6.43 Yes 72 -4.03 No 0 0 No -26 0.79 Yes 51 41.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68533430 + NM_133509 RAD51B 0 . . . 2.53 93.25 15 5 No 66 -4.65 No 0 0 No -60 0.32 No 45 48.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6015305 - NM_000535 PMS2 0 . . . 3.19 69.48 14 4.23 No 24 -3.26 No 0 0 No -23 0.56 No 43 66.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68971409 + NM_133509 RAD51B 0 . . . 9.04 84.58 28 5.66 Yes 36 2.11 Yes 0 0 No -25 0.63 No 22 92.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32914358 + NM_000059 BRCA2 0 . . . 0.75 76.68 37 6.48 Yes 24 0.6 No 0 0 No -32 0.71 Yes 49 70.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190735500 + NM_000534 PMS1 0 . . . 4.35 64.05 17 4.78 No 22 1.21 Yes 0 0 No -49 0.7 Yes 36 70.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215592179 - NM_000465 BARD1 0 . . . 5.44 80.62 19 5.46 No 0 0.83 Yes 0 0 No -23 0.64 No 54 49.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94220745 - NM_005591 MRE11 0 . . . 3.08 81.79 66 6.3 Yes 30 1.16 Yes 0 0 No -30 0.71 Yes 49 42.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68676839 + NM_133509 RAD51B 0 . . . 0.38 68.84 30 5.66 Yes 47 0.48 No 0 0 No -23 0.37 No 48 43.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68820069 + NM_133509 RAD51B 0 . . . 5.49 70.49 14 4.53 No 7 0.62 No 0 0 No -19 0.53 No 47 86.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69054051 + NM_133509 RAD51B 0 . . . 2.61 0 21 4.44 No 51 1.15 Yes 0 0 No -23 0.52 No 51 37.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68774273 + NM_004360 CDH1 0 . . . 9.11 77.72 31 5.74 Yes 17 1.02 Yes 0 0 No -30 0.89 Yes 41 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21983805 - NM_000077 CDKN2A 0 . . . 4.08 65.14 28 5.52 No 69 0.05 No 0 0 No -27 0.45 No 34 64.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68596108 + NM_133509 RAD51B 0 . . . 0.05 80.23 38 4.64 No 17 0.25 No 0 0 No -37 0.81 Yes 41 96.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47718139 + NM_000251 MSH2 0 . . . 2.81 68.95 17 4.8 No 16 1.1 Yes 0 0 No -22 0.43 No 42 89.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90989735 - NM_002485 NBN 0 . . . 0.31 71.57 12 3.95 No 10 -2.1 No 0 0 No -34 0.82 Yes 48 80.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59886198 - NM_032043 BRIP1 0 . . . 7.77 94.78 17 5.29 No 3 0.75 No 0 0 No -25 0.46 No 46 74.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69133591 + NM_133509 RAD51B 0 . . . 4.68 77.51 36 5.92 Yes 67 0.95 Yes 0 0 No -28 0.66 Yes 47 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68305204 + NM_133509 RAD51B 0 . . . 1.41 74.12 17 4.47 No 44 0.41 No 0 0 No -16 0.36 No 48 72.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108193380 + NM_000051 ATM 0 . . . 5.09 80.05 24 5.92 Yes 8 0.86 Yes 0 0 No -31 0.28 No 43 76.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68868351 + NM_133509 RAD51B 0 . . . 8.79 86.91 47 6.85 Yes 5 1.33 Yes 0 0 No -28 0.73 Yes 49 82.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68640580 + NM_133509 RAD51B 0 . . . 5.78 81.94 26 4.72 No 76 -4.37 No 0 0 No -25 0.81 Yes 49 63.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68611597 + NM_133509 RAD51B 0 . . . 0.35 67.29 21 6.77 Yes 39 1.06 Yes 0 0 No -20 0.88 Yes 33 84.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68674530 + NM_133509 RAD51B 0 . . . 3.18 78.32 17 5.94 Yes 43 -3.98 No 0 0 No -29 0.88 Yes 48 49.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69123996 + NM_133509 RAD51B 0 . . . 3.82 79.67 41 6.52 Yes -3 1.31 Yes 0 0 No -26 0.85 Yes 47 50.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47731063 + NM_000251 MSH2 0 . . . 0.36 0 45 5.67 Yes 47 0.46 No 0 0 No -23 0.33 No 53 56.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41241923 - NM_007294 BRCA1 0 . . . 1.4 81.72 15 4.06 No 76 1.04 Yes 0 0 No -27 0.42 No 50 82.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68383485 + NM_133509 RAD51B 0 . . . 0.28 58.51 14 4.7 No 60 1.75 Yes 0 0 No -25 0.9 Yes 48 46.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68585124 + NM_133509 RAD51B 0 . . . 5.66 69.38 31 5.1 No 76 1.6 Yes 0 0 No -28 0.88 Yes 38 68.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68560892 + NM_133509 RAD51B 0 . . . 4.43 73.06 22 4.8 No 72 0.79 Yes 0 0 No -21 0.84 Yes 43 60.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131925285 + NM_005732 RAD50 0 . . . 0.35 69.46 41 6.51 Yes 69 0.54 No 21 0.88 Yes -30 0.85 Yes 46 66.39 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 190697374 + NM_000534 PMS1 0 . . . 5.2 85.02 18 5.29 No 5 1.09 Yes 0 0 No -27 0.56 No 53 75.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108240228 + NM_000051 ATM 0 . . . 2.44 62.41 24 5.29 No 35 0.73 No 0 0 No -21 0.81 Yes 38 83.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68674648 + NM_133509 RAD51B 0 . . . 1.94 70.8 22 5.53 No 13 0.77 Yes 0 0 No -26 0.77 Yes 28 56.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108235543 + NM_000051 ATM 0 . . . 4.04 73.89 43 6.63 Yes 0 1.16 Yes 0 0 No -30 0.74 Yes 54 63.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68579916 + NM_133509 RAD51B 0 . . . 1.42 69.82 17 6.08 Yes 13 0.37 No 0 0 No -16 0.71 Yes 45 87.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33445437 - NM_002878 RAD51D 0 . . . 0.31 0 41 6.25 Yes 15 1.05 Yes 0 0 No -23 0.36 No 43 96.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32954440 + NM_000059 BRCA2 0 . . . 3.5 74.22 43 6.92 Yes 3 1.11 Yes 0 0 No -24 0.31 No 37 74.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152353574 - NM_005431 XRCC2 0 . . . 1.77 72.05 19 4.47 No 3 -2.02 No 0 0 No -18 0.85 Yes 48 78.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68857984 + NM_133509 RAD51B 0 . . . 7.36 85.34 18 5.9 Yes 9 1.73 Yes 0 0 No -23 0.64 No 39 57.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41265898 - NM_007294 BRCA1 0 . . . 2.04 74.73 16 4.66 No 34 1.03 Yes 0 0 No -45 0.52 No 24 62.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59942304 - NM_032043 BRIP1 0 . . . 2.2 72.26 23 5.1 No 30 1.19 Yes 0 0 No -22 0.58 No 28 68.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68322721 + NM_133509 RAD51B 0 . . . 8.26 73.92 15 4.58 No 2 1.14 Yes 0 0 No -21 0.53 No 44 60.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41272537 - NM_007294 BRCA1 0 . . . 2.41 68.34 29 4.47 No 21 1.7 Yes 0 0 No -22 0.73 Yes 37 71.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190721761 + NM_000534 PMS1 0 . . . 3.15 77.14 24 4.88 No 72 0.59 No 0 0 No -23 0.81 Yes 44 58.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68785669 + NM_004360 CDH1 0 . . . 3.15 68.34 24 5.19 No 23 1.57 Yes 0 0 No -23 0.89 Yes 35 67.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68981230 + NM_133509 RAD51B 0 . . . 0.51 0 22 7.44 Yes 29 0.58 No 0 0 No -26 0.34 No 46 53.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108214121 + NM_000051 ATM 0 . . . 0.56 62.96 20 5.1 No 4 0.01 No 0 0 No -19 0.42 No 54 46.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68345759 + NM_133509 RAD51B 0 . . . 3.97 78.46 32 7.01 Yes 70 0.64 No 0 0 No -31 0.62 No 46 85.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68619487 + NM_133509 RAD51B 0 . . . 4.78 78.67 18 4.9 No 51 1.71 Yes 0 0 No -44 0.43 No 37 54.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152352627 - NM_005431 XRCC2 0 . . . 7.15 80.84 22 5.54 No 7 1.2 Yes 0 0 No -24 0.78 Yes 51 88.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68841276 + NM_004360 CDH1 0 . . . 0.25 73.65 28 6.07 Yes 39 0.27 No 0 0 No -27 0.82 Yes 19 67.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47762502 + NM_000251 MSH2 0 . . . 9.32 89.09 20 4.79 No 19 0.3 No 0 0 No -49 0.72 Yes 42 76.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68917120 + NM_133509 RAD51B 0 . . . 2.24 80.12 25 4.94 No 7 1.02 Yes 0 0 No -25 0.73 Yes 51 79.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68594152 + NM_133509 RAD51B 0 . . . 4.62 82.35 28 5.47 No 12 1.1 Yes 0 0 No -28 0.82 Yes 46 87.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69036984 + NM_133509 RAD51B 0 . . . 0.11 60.45 29 5.3 No 65 1.6 Yes 0 0 No -28 0.86 Yes 40 30.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29087933 - NM_001005735 CHEK2 0 . . . 0.26 56 30 6 Yes 9 0.41 No 0 0 No -29 0.78 Yes 49 89.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69037257 + NM_133509 RAD51B 0 . . . 4.6 79.93 21 4.9 No 63 -3.3 No 0 0 No -20 0.74 Yes 49 60.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68305557 + NM_133509 RAD51B 0 . . . 2.31 72.85 31 5.19 No 5 1.01 Yes 0 0 No -30 0.51 No 34 19.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152361374 - NM_005431 XRCC2 0 . . . 3.16 75.96 26 5.18 No 55 0.97 Yes 0 0 No -25 0.48 No 47 71.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75519776 - NM_001040108 MLH3 0 . . . 2.62 71.06 32 5.74 Yes 28 1.08 Yes 0 0 No -31 0.82 Yes 42 52.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105209480 + NM_021930 RINT1 0 . . . 6.91 73.75 23 4.99 No 18 2.13 Yes 0 0 No -22 0.37 No 40 95.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68827885 + NM_004360 CDH1 0 . . . 4.55 85.23 14 4.47 No 40 -3.22 No 0 0 No -18 0.5 No 53 50.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215654206 - NM_000465 BARD1 0 . . . 0.05 65.48 30 6 Yes 60 -1.63 No 0 0 No -32 0.63 No 63 27.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215595982 - NM_000465 BARD1 0 . . . 4.72 84.56 35 6.4 Yes 60 -3.71 No 0 0 No -34 0.65 No 53 70.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190700073 + NM_000534 PMS1 0 . . . 2.6 74.37 17 6.08 Yes 7 1.03 Yes 0 0 No -16 0.81 Yes 45 69.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47683235 + NM_000251 MSH2 0 . . . 10.32 95.19 25 5.03 No 75 1.55 Yes 0 0 No -25 0.88 Yes 39 65.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68866475 + NM_133509 RAD51B 0 . . . 4.96 73.54 21 4.8 No 26 -1.33 No 0 0 No -20 0.66 No 45 31.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47669069 + NM_000251 MSH2 0 . . . 1.2 67.36 22 5.77 Yes 33 1.11 Yes 0 0 No -27 0.84 Yes 25 54.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190708524 + NM_000534 PMS1 0 . . . 2.49 82.04 19 4.58 No 73 -5.06 No 0 0 No -18 0.91 Yes 48 54.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47686354 + NM_000251 MSH2 0 . . . 1.4 66.58 15 4.57 No 56 1.44 Yes 0 0 No -18 0.67 Yes 48 26.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105193141 + NM_021930 RINT1 0 . . . 4.74 84.41 37 6.12 Yes 21 1.29 Yes 0 0 No -32 0.77 Yes 37 76.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68971228 + NM_133509 RAD51B 0 . . . 0.31 72.09 29 6.32 Yes 48 0.78 Yes 0 0 No -28 0.8 Yes 23 31.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104182082 - NM_001100119 XRCC3 0 . . . 3.54 66.93 17 4.58 No 74 0.96 Yes 0 0 No -39 0.32 No 23 26.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37057237 + NM_000249 MLH1 0 . . . 2.04 78.36 24 3.92 No 30 1.84 Yes 0 0 No -19 0.89 Yes 28 85.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89648876 + NM_000314 PTEN 0 . . . 6.04 89.22 20 4.07 No 61 2.36 Yes 0 0 No -19 0.52 No 48 95.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68923907 + NM_133509 RAD51B 0 . . . 0.77 73.51 20 4.8 No 19 1.8 Yes 0 0 No -19 0.91 Yes 26 47.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41248980 - NM_007294 BRCA1 0 . . . 4.17 87.07 24 5.83 Yes 40 1.33 Yes 0 0 No -23 0.71 Yes 48 57.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47741260 + NM_000251 MSH2 0 . . . 1.93 72.39 13 5 No 49 0.92 Yes 0 0 No -24 0.5 No 12 35.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94159537 - NM_005591 MRE11 0 . . . 6.59 87.99 37 8.15 Yes 5 0.85 Yes 0 0 No -36 0.75 Yes 52 71.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47678026 + NM_000251 MSH2 0 . . . 2.67 61.9 39 6.32 Yes 19 0.37 No 0 0 No -35 0.42 No 39 58.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108164331 + NM_000051 ATM 0 . . . 2.87 65.55 37 6.84 Yes 14 -2.93 No 0 0 No -22 0.51 No 44 47.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48014011 + NM_000179 MSH6 0 . . . 1.52 77 25 4.68 No 28 1.25 Yes 0 0 No -24 0.69 Yes 54 37.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37083466 + NM_000249 MLH1 0 . . . 2.4 68.71 21 7.21 Yes 23 -2.57 No 0 0 No -20 0.85 Yes 47 49.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68942103 + NM_133509 RAD51B 0 . . . 4.25 77.17 23 4.8 No 54 -5.4 No 0 0 No -27 0.62 No 45 66.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215648609 - NM_000465 BARD1 0 . . . 3.39 73.81 19 4.12 No 46 0.24 No 0 0 No -24 0.76 Yes 37 61.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48017101 + NM_000179 MSH6 0 . . . 1.93 83.52 27 6.12 Yes 54 1.14 Yes 0 0 No -26 0.87 Yes 29 74.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69092532 + NM_133509 RAD51B 0 . . . 8.22 81.21 17 5.57 Yes 11 0.85 Yes 0 0 No -16 0.53 No 47 88.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108216173 + NM_000051 ATM 0 . . . 1.25 66.83 23 5.2 No 74 0.2 No 0 0 No -22 0.85 Yes 44 36.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41011226 + NM_001164269 RAD51 0 . . . 3.33 65.08 26 4.24 No 24 1.31 Yes 0 0 No -22 0.55 No 46 62.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59926711 - NM_032043 BRIP1 0 . . . 3.35 69.57 16 4.17 No 18 0.4 No 0 0 No -19 0.72 Yes 49 48.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68611133 + NM_133509 RAD51B 0 . . . 2.91 76.01 15 5.29 No 44 -5.38 No 0 0 No -55 0.56 No 45 82.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152368237 - NM_005431 XRCC2 0 . . . 0.52 0 25 4.09 No 38 0.93 Yes 0 0 No -24 0.65 No 63 37.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41205620 - NM_007294 BRCA1 0 . . . 3.95 72.27 25 5.2 No -4 0.4 No 0 0 No -52 0.59 No 43 77.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131970940 + NM_005732 RAD50 0 . . . 1.99 80.64 40 6.49 Yes 47 1.19 Yes 0 0 No -39 0.6 No 52 74.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89632573 + NM_000314 PTEN 0 . . . 8.31 86.58 21 4.09 No 7 0.7 No 0 0 No -29 0.52 No 51 83.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1222192 + NM_000455 STK11 0 . . . 4.44 77.66 17 4.4 No -3 -0.1 No 0 0 No -23 0.79 Yes 50 54.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68553068 + NM_133509 RAD51B 0 . . . 5.34 79.08 21 6.41 Yes -3 0.35 No 0 0 No -20 0.62 No 24 73.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68835296 + NM_004360 CDH1 0 . . . 1.11 80.49 28 5.83 Yes 37 1.55 Yes 0 0 No -55 0.61 No 31 71.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47663556 + NM_000251 MSH2 0 . . . 1.34 85.24 13 4.8 No 25 1.36 Yes 0 0 No -20 0.74 Yes 48 49.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32956275 + NM_000059 BRCA2 0 . . . 4.02 80.12 27 4.88 No 72 -2.65 No 0 0 No -24 0.28 No 45 71.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68777159 + NM_133509 RAD51B 0 . . . 0.46 55.01 23 5.23 No 51 0.91 Yes 0 0 No -30 0.62 No 57 10.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47638597 + NM_000251 MSH2 0 . . . 0.25 0 16 4.94 No 7 1.91 Yes 0 0 No -20 0.86 Yes 22 53.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68350150 + NM_133509 RAD51B 0 . . . 10.78 88.91 14 5.32 No 4 1.12 Yes 0 0 No -21 0.55 No 25 73.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68340317 + NM_133509 RAD51B 0 . . . 1.79 67.82 25 6.38 Yes 66 -5.26 No 0 0 No -24 0.85 Yes 36 60.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68444616 + NM_133509 RAD51B 0 . . . 1.34 62.97 16 7.74 Yes 39 0.32 No 0 0 No -34 0.79 Yes 44 74.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68846052 + NM_133509 RAD51B 0 . . . 8.58 81.94 15 4.58 No 14 1.19 Yes 0 0 No -39 0.51 No 44 96.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108147747 + NM_000051 ATM 0 . . . 0.76 74.92 12 3.41 No 57 0.64 No 0 0 No -33 0.6 No 44 51.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68496534 + NM_133509 RAD51B 0 . . . 5.68 78.37 25 6.16 Yes 40 -1.99 No 0 0 No -24 0.93 Yes 38 54.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131968146 + NM_005732 RAD50 0 . . . 4.89 78.65 14 4.36 No 60 1.31 Yes 0 0 No -24 0.61 No 49 72.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48015150 + NM_000179 MSH6 0 . . . 1.48 80.6 22 5.28 No 33 -2.94 No 0 0 No -21 0.33 No 40 81.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152373822 - NM_005431 XRCC2 0 . . . 1.08 84.22 42 4.98 No 33 1.2 Yes 0 0 No -41 0.53 No 50 44.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68603345 + NM_133509 RAD51B 0 . . . 3.16 69.89 20 5.66 Yes 60 0.42 No 0 0 No -54 0.42 No 54 36.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105207063 + NM_021930 RINT1 0 . . . 1.44 0 41 6.69 Yes 13 0.2 No 0 0 No -26 0.53 No 45 32.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108215963 + NM_000051 ATM 0 . . . 1.7 71.91 35 5.64 Yes 57 -4.7 No 0 0 No -24 0.78 Yes 46 70.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215640890 - NM_000465 BARD1 0 . . . 4.62 77.94 21 4.47 No 23 -2.7 No 0 0 No -18 0.38 No 50 51.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68749353 + NM_133509 RAD51B 0 . . . 1.77 75.7 15 5.6 Yes 1 0.97 Yes 0 0 No -26 0.81 Yes 45 57.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40994166 + NM_001164269 RAD51 0 . . . 5.02 80.12 13 5.29 No 7 1.07 Yes 0 0 No -27 0.46 No 51 86.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108230995 + NM_000051 ATM 0 . . . 3.6 65.4 15 5.2 No 76 -2.23 No 0 0 No -14 0.4 No 48 18.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215612111 - NM_000465 BARD1 0 . . . 7.69 77.95 17 5.35 No 30 -1.6 No 0 0 No -26 0.47 No 46 70.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59936309 - NM_032043 BRIP1 0 . . . 1.06 0 16 4.69 No 15 0.77 No 0 0 No -23 0.74 Yes 38 82.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190719228 + NM_000534 PMS1 0 . . . 4.73 76.2 27 5.1 No 8 1.27 Yes 0 0 No -27 0.52 No 50 70 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68480314 + NM_133509 RAD51B 0 . . . 3.87 75.64 21 5.09 No 8 0.78 Yes 0 0 No -20 0.82 Yes 39 60.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59808730 - NM_032043 BRIP1 0 . . . 2.16 75.58 24 5.67 Yes 71 -5.95 No 0 0 No -30 0.4 No 51 65.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47800753 + NM_000251 MSH2 0 . . . 3.38 74.16 24 6.07 Yes 8 1.89 Yes 0 0 No -23 0.7 Yes 50 59.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59786061 - NM_032043 BRIP1 0 . . . 1.92 73.8 32 6 Yes 44 0.3 No 0 0 No -31 0.65 No 42 36.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45803676 - NM_001048171 MUTYH 0 . . . 4.16 77.32 25 5.09 No 76 1.75 Yes 0 0 No -24 0.82 Yes 37 93.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47787182 + NM_000251 MSH2 0 . . . 0.31 62.7 18 4.69 No 70 -4.59 No 0 0 No -20 0.68 Yes 58 23.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45799488 - NM_001048171 MUTYH 0 . . . 1.12 0 29 4.43 No 34 0.7 No 0 0 No -28 0.37 No 53 75.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41255864 - NM_007294 BRCA1 0 . . . 1.05 80.49 18 4.9 No 37 1.54 Yes 0 0 No -44 0.63 No 21 52.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6047069 - NM_000535 PMS2 0 . . . 0.74 0 34 5.88 Yes 30 -2.42 No 0 0 No -33 0.66 No 45 85.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68927263 + NM_133509 RAD51B 0 . . . 2.92 70.4 50 5.88 Yes 26 1.64 Yes 0 0 No -21 0.8 Yes 32 93.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37087461 + NM_000249 MLH1 0 . . . 7.24 84.9 33 5.74 Yes 21 1.58 Yes 0 0 No -26 0.49 No 47 77.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68912731 + NM_133509 RAD51B 0 . . . 3.57 69.49 24 5.29 No -4 0.13 No 0 0 No -21 0.82 Yes 42 73.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131915121 + NM_005732 RAD50 0 . . . 2.72 79.55 23 4.87 No 57 0.86 Yes 0 0 No -22 0.73 Yes 45 75.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21990859 - NM_000077 CDKN2A 0 . . . 1.7 68.5 33 5.83 Yes 18 0.64 No 0 0 No -32 0.54 No 36 69.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68693555 + NM_133509 RAD51B 0 . . . 1.39 0 42 5.11 No 1 0.85 Yes 0 0 No -37 0.25 No 57 39.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68866656 + NM_133509 RAD51B 0 . . . 2.95 69.92 30 4.96 No 1 1.52 Yes 0 0 No -29 0.78 Yes 34 55.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215675084 - NM_000465 BARD1 0 . . . 2.2 65.1 19 7.07 Yes -4 0.39 No 0 0 No -27 0.66 No 45 63.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190656576 + NM_000534 PMS1 0 . . . 2.98 71.79 23 4.73 No 73 0.27 No 0 0 No -26 0.39 No 49 51.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68527266 + NM_133509 RAD51B 0 . . . 4.57 88.02 15 5.88 Yes 3 0.29 No 0 0 No -25 0.49 No 46 91.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47637950 + NM_000251 MSH2 0 . . . 3.61 84.17 25 5.56 Yes 42 1.74 Yes 0 0 No -18 0.51 No 16 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105184261 + NM_021930 RINT1 0 . . . 2.31 0 19 4.9 No 38 -3.08 No 0 0 No -18 0.76 Yes 45 52.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68348770 + NM_133509 RAD51B 0 . . . 4.93 78.57 16 5.71 Yes 38 1.64 Yes 0 0 No -23 0.7 Yes 44 81.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131945667 + NM_005732 RAD50 0 . . . 4.22 82.9 25 5.3 No 43 1.45 Yes 0 0 No -27 0.52 No 44 87.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68554794 + NM_133509 RAD51B 0 . . . 7.97 82.88 12 5.99 Yes 8 1.1 Yes 0 0 No -32 0.35 No 50 30.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41202114 - NM_007294 BRCA1 0 . . . 4.03 81.23 25 3.9 No 16 -2.46 No 0 0 No -41 0.6 No 55 30.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131902463 + NM_005732 RAD50 0 . . . 6.45 69.77 14 5.83 Yes -1 0.2 No 0 0 No -27 0.46 No 42 44.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23628655 - NM_024675 PALB2 0 . . . 4.16 66.01 17 4.8 No 14 0.91 Yes 0 0 No -43 0.22 No 44 93.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68954981 + NM_133509 RAD51B 0 . . . 1.3 0 31 6.86 Yes 30 -3.19 No 0 0 No -30 0.68 Yes 43 33.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68414312 + NM_133509 RAD51B 0 . . . 4.77 87.39 20 4.17 No 69 0.79 Yes 0 0 No -19 0.44 No 44 56.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68597860 + NM_133509 RAD51B 0 . . . 2.58 77.19 18 6.32 Yes 5 0.65 No 0 0 No -17 0.64 No 53 41.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68458535 + NM_133509 RAD51B 0 . . . 4.41 81.61 21 4.78 No 75 -4.74 No 0 0 No -23 0.54 No 51 56.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94192085 - NM_005591 MRE11 0 . . . 3.61 76.63 17 5.29 No 14 0.5 No 0 0 No -21 0.64 No 44 93.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68535070 + NM_133509 RAD51B 0 . . . 6.05 74.93 17 5.07 No 50 1.17 Yes 0 0 No -16 0.53 No 27 54.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68898235 + NM_133509 RAD51B 0 . . . 7.78 82.38 38 6.91 Yes 3 0.57 No 0 0 No -25 0.65 No 55 57.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41205444 - NM_007294 BRCA1 0 . . . 1 78.4 17 6.08 Yes 75 1.06 Yes 0 0 No -16 0.73 Yes 47 69.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68427435 + NM_133509 RAD51B 0 . . . 0.42 0 15 4.17 No 57 0.94 Yes 0 0 No -30 0.46 No 10 26.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131942935 + NM_005732 RAD50 0 . . . 1.82 73.77 16 5.04 No 65 -5.26 No 0 0 No -20 0.71 Yes 58 28.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215642219 - NM_000465 BARD1 0 . . . 2.19 74.37 25 5.71 Yes 42 0.76 No 0 0 No -31 0.53 No 48 84.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68907960 + NM_133509 RAD51B 0 . . . 6.65 88.16 22 5.29 No 6 0.6 No 0 0 No -26 0.86 Yes 51 37.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68613715 + NM_133509 RAD51B 0 . . . 6.84 81.05 17 4.8 No 66 -2.43 No 0 0 No -19 0.7 Yes 43 71.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29085146 - NM_001005735 CHEK2 0 . . . 1.54 65.98 15 4.24 No 67 0.6 No 0 0 No -27 0.76 Yes 52 62.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68770199 + NM_004360 CDH1 0 . . . 2.72 68.38 21 4.47 No 24 0.07 No 0 0 No -20 0.8 Yes 47 30.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59887566 - NM_032043 BRIP1 0 . . . 1.28 74.47 22 5.29 No 34 1.39 Yes 0 0 No -21 0.74 Yes 48 41.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108143871 + NM_000051 ATM 0 . . . 5.63 82.77 13 4.31 No 54 1.01 Yes 0 0 No -37 0.73 Yes 42 52.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69096002 + NM_133509 RAD51B 0 . . . 3.65 86.83 16 4.69 No 67 1.38 Yes 0 0 No -25 0.39 No 48 64.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32936870 + NM_000059 BRCA2 0 . . . 0.39 69.62 20 7.14 Yes 63 0.44 No 0 0 No -19 0.69 Yes 46 34.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89681639 + NM_000314 PTEN 0 . . . 0.53 65.86 37 5.89 Yes -1 0.13 No 0 0 No -30 0.76 Yes 44 56.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37044531 + NM_000249 MLH1 0 . . . 2.28 73.66 68 9.21 Yes 52 -2.1 No 0 0 No -28 0.47 No 34 93.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41197357 - NM_007294 BRCA1 0 . . . 5.51 78.22 27 6 Yes 39 1.52 Yes 0 0 No -26 0.44 No 30 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32949660 + NM_000059 BRCA2 0 . . . 5.6 78.41 21 5.2 No 34 0.73 No 0 0 No -20 0.71 Yes 45 61.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69121815 + NM_133509 RAD51B 0 . . . 3.74 59.89 23 5.21 No 25 1.25 Yes 0 0 No -22 0.75 Yes 19 72.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94179882 - NM_005591 MRE11 0 . . . 2.09 62.1 16 4.69 No 41 -2.42 No 0 0 No -57 0.4 No 31 21.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69087640 + NM_133509 RAD51B 0 . . . 0.03 79.47 13 5.29 No 15 0.33 No 0 0 No -25 0.72 Yes 50 63.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48018934 + NM_000179 MSH6 0 . . . 0.71 84.89 22 5.1 No 74 1.49 Yes 0 0 No -21 0.73 Yes 52 67.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32899567 + NM_000059 BRCA2 0 . . . 5.28 74.91 17 5.74 Yes -2 0.56 No 0 0 No -16 0.27 No 32 49.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68932169 + NM_133509 RAD51B 0 . . . 2.36 63.17 19 5.35 No 76 2.04 Yes 0 0 No -26 0.68 Yes 39 27.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75485283 - NM_001040108 MLH3 0 . . . 0.82 71.17 26 6.32 Yes 23 0.34 No 0 0 No -25 0.64 No 32 43.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59942430 - NM_032043 BRIP1 0 . . . 0.18 61.67 33 4.62 No -4 0.7 No 0 0 No -28 0.33 No 43 46.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59836145 - NM_032043 BRIP1 0 . . . 1.04 73 13 5.37 No 4 0.41 No 0 0 No -26 0.56 No 42 72.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45795792 - NM_001048171 MUTYH 0 . . . 0.02 0 23 4.92 No 20 0.38 No 0 0 No -22 0.89 Yes 38 42.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68753321 + NM_133509 RAD51B 0 . . . 5.15 73.05 15 5.29 No 33 0.25 No 0 0 No -21 0.66 No 39 86.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68858717 + NM_004360 CDH1 0 . . . 2.81 74.13 11 4.04 No 37 0.13 No 0 0 No -28 0.82 Yes 15 56.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68838606 + NM_004360 CDH1 0 . . . 8.6 82.28 26 5.63 Yes 8 0.88 Yes 0 0 No -28 0.46 No 50 86.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68422182 + NM_133509 RAD51B 0 . . . 6.28 75.78 32 5.64 Yes 70 -3.98 No 0 0 No -25 0.37 No 44 67.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68916980 + NM_133509 RAD51B 0 . . . 5.21 86.57 21 4.34 No 3 0.8 Yes 0 0 No -20 0.79 Yes 43 51.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68704806 + NM_133509 RAD51B 0 . . . 3.46 79.29 31 5.98 Yes 14 1.66 Yes 0 0 No -30 0.51 No 44 91.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45796513 - NM_001048171 MUTYH 0 . . . 0.85 0 13 4.03 No 21 0.84 Yes 0 0 No -22 0.55 No 42 46.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68624000 + NM_133509 RAD51B 0 . . . 0.74 62.63 16 4.92 No 5 1.08 Yes 0 0 No -20 0.83 Yes 37 44.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47660436 + NM_000251 MSH2 0 . . . 10.13 86.11 19 4.69 No 8 2.26 Yes 0 0 No -33 0.66 Yes 50 73.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29118864 - NM_001005735 CHEK2 0 . . . 6.49 75.21 16 6.47 Yes 5 -2.76 No 0 0 No -22 0.44 No 48 53.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68548863 + NM_133509 RAD51B 0 . . . 5.09 74.34 9 5.83 Yes 8 1.3 Yes 0 0 No -27 0.83 Yes 50 88.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68962879 + NM_133509 RAD51B 0 . . . 6.52 83.99 23 4.77 No 34 1.56 Yes 0 0 No -23 0.69 Yes 52 61.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190708154 + NM_000534 PMS1 0 . . . 7.21 82.18 23 4.9 No 15 0.84 Yes 0 0 No -22 0.54 No 43 90.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105186369 + NM_021930 RINT1 0 . . . 0.14 84.22 21 4.88 No 75 1.46 Yes 0 0 No -20 0.86 Yes 25 35.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32895249 + NM_000059 BRCA2 0 . . . 2.15 65.2 21 6.22 Yes 76 -6.56 No 0 0 No -20 0.85 Yes 36 16.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32947914 + NM_000059 BRCA2 0 . . . 8.48 83.78 27 4.97 No 6 0.53 No 0 0 No -27 0.54 No 41 77.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68968950 + NM_133509 RAD51B 0 . . . 0.73 0 21 5.63 Yes 72 -4.62 No 0 0 No -25 0.4 No 51 45.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108200818 + NM_000051 ATM 0 . . . 1.1 64.61 21 5.1 No 16 0.31 No 0 0 No -27 0.6 No 42 54.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68793972 + NM_004360 CDH1 0 . . . 2.55 70.66 18 4.9 No 69 1.07 Yes 0 0 No -20 0.52 No 40 58.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68465611 + NM_133509 RAD51B 0 . . . 3.03 0 37 6.22 Yes 46 0.82 Yes 0 0 No -36 0.75 Yes 32 63.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68855534 + NM_133509 RAD51B 0 . . . 5.12 82.27 26 4.85 No 66 1.12 Yes 0 0 No -20 0.68 Yes 48 71.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32944487 + NM_000059 BRCA2 0 . . . 5.36 67.2 21 4.32 No 57 0.75 No 0 0 No -20 0.58 No 54 44.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69118485 + NM_133509 RAD51B 0 . . . 5.29 81.7 28 5.25 No 8 1.39 Yes 0 0 No -27 0.69 Yes 50 84.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215631315 - NM_000465 BARD1 0 . . . 0.81 68.34 15 6.43 Yes 53 -3.98 No 0 0 No -25 0.65 No 47 61.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68800794 + NM_133509 RAD51B 0 . . . 8.52 85.59 22 5.91 Yes 44 0.03 No 0 0 No -21 0.68 Yes 44 77.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59756764 - NM_032043 BRIP1 0 . . . 1.93 75.63 22 4.33 No 75 -4.95 No 0 0 No -21 0.87 Yes 45 36.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59783567 - NM_032043 BRIP1 0 . . . 0.79 74.81 24 5.2 No 3 0.07 No 0 0 No -23 0.62 No 45 60.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68551287 + NM_133509 RAD51B 0 . . . 4.17 70.43 26 4.88 No 55 -4.85 No 0 0 No -53 0.65 No 46 60.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68286565 + NM_133509 RAD51B 0 . . . 0.98 76.59 14 4.9 No 22 -2.06 No 0 0 No -13 0.23 No 53 30.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89731359 + NM_000314 PTEN 0 . . . 4.16 78.19 16 5.29 No 47 0.66 No 0 0 No -10 0.55 No 25 89.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68584816 + NM_133509 RAD51B 0 . . . 1.28 68.65 49 6.05 Yes 61 2.64 Yes 0 0 No -16 0.7 Yes 38 61.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89714949 + NM_000314 PTEN 0 . . . 6.01 84.79 10 4.9 No 16 1.11 Yes 0 0 No -39 0.46 No 42 88.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68498483 + NM_133509 RAD51B 0 . . . 6.17 81.09 15 5.2 No 15 0.43 No 0 0 No -25 0.42 No 43 90.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69021122 + NM_133509 RAD51B 0 . . . 10.65 84.86 36 5.83 Yes 74 0.96 Yes 0 0 No -28 0.78 Yes 37 75.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47735475 + NM_000251 MSH2 0 . . . 9.78 92 18 5.29 No 54 0.37 No 0 0 No -23 0.95 Yes 34 81.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68806156 + NM_133509 RAD51B 0 . . . 8.55 93.03 59 7.24 Yes 5 0.41 No 0 0 No -51 0.69 Yes 52 85.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75495688 - NM_001040108 MLH3 0 . . . 3.6 85.02 53 7.89 Yes 4 1.2 Yes 0 0 No -24 0.65 No 54 64.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94185640 - NM_005591 MRE11 0 . . . 1.24 64.6 28 4.87 No 53 0.03 No 0 0 No -20 0.84 Yes 48 29.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6034045 - NM_000535 PMS2 0 . . . 6.19 82.05 28 5.38 No 52 -3.63 No 0 0 No -27 0.42 No 46 71.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68887565 + NM_133509 RAD51B 0 . . . 2.42 0 23 5.39 No 16 1.03 Yes 0 0 No -22 0.53 No 42 76.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59911832 - NM_032043 BRIP1 0 . . . 1.68 69.48 35 6.4 Yes 16 -1.61 No 0 0 No -27 0.58 No 42 79.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6041457 - NM_000535 PMS2 0 . . . 2.24 80.12 25 5.33 No 7 1.16 Yes 0 0 No -21 0.67 Yes 51 78.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190696042 + NM_000534 PMS1 0 . . . 1.09 67.64 21 5.74 Yes 40 0.29 No 0 0 No -20 0.54 No 45 55.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105187946 + NM_021930 RINT1 0 . . . 1.71 67.43 14 5.56 Yes 13 0.49 No 0 0 No -24 0.5 No 45 86.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108103312 + NM_000051 ATM 0 . . . 3.04 76.22 20 5.39 No 56 1.61 Yes 0 0 No -23 0.5 No 43 14.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68977152 + NM_133509 RAD51B 0 . . . 3.86 79.25 14 4.47 No 13 -0.16 No 0 0 No -55 0.39 No 45 83.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59863420 - NM_032043 BRIP1 0 . . . 5.45 73.77 20 5.04 No 59 0.85 Yes 0 0 No -20 0.73 Yes 47 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68437808 + NM_133509 RAD51B 0 . . . 1.05 62.09 23 4.95 No 22 0.77 No 0 0 No -58 0.49 No 43 51.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94184346 - NM_005591 MRE11 0 . . . 4.11 83.28 27 5.2 No 37 0.7 No 0 0 No -26 0.65 No 21 70.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108129040 + NM_000051 ATM 0 . . . 6.71 94.02 20 5.1 No 3 0.88 Yes 0 0 No -19 0.69 Yes 46 97.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69025139 + NM_133509 RAD51B 0 . . . 1.42 67.32 10 4 No 10 -1.99 No 0 0 No -53 0.52 No 48 73.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41003942 + NM_001164269 RAD51 0 . . . 3.5 72.7 23 5.28 No -2 0.05 No 0 0 No -22 0.48 No 46 50.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131958529 + NM_005732 RAD50 0 . . . 8.53 82.27 18 4.9 No 2 1.6 Yes 0 0 No -44 0.67 Yes 40 53.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41021749 + NM_001164269 RAD51 0 . . . 0.73 0 46 6.67 Yes -3 -0.9 No 0 0 No -24 0.53 No 36 34.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68296962 + NM_133509 RAD51B 0 . . . 1.31 55.62 21 5.66 Yes 11 0.65 No 0 0 No -29 0.48 No 29 90.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68475015 + NM_133509 RAD51B 0 . . . 3.96 71.32 17 4.41 No 10 0.32 No 0 0 No -22 0.77 Yes 38 81.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75482998 - NM_001040108 MLH3 0 . . . 0.75 73.56 30 5.92 Yes 49 0.35 No 0 0 No -25 0.75 Yes 46 86.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75502712 - NM_001040108 MLH3 0 . . . 4.74 80.11 29 7.9 Yes 0 0.82 Yes 0 0 No -29 0.85 Yes 44 59.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56801793 + NM_058216 RAD51C 0 . . . 3.29 75.04 20 5.56 Yes 35 0.25 No 0 0 No -24 0.56 No 49 49.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68989296 + NM_133509 RAD51B 0 . . . 0.39 71.31 22 5.92 Yes 57 1.02 Yes 0 0 No -21 0.95 Yes 46 37.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59842640 - NM_032043 BRIP1 0 . . . 0.7 0 30 5.92 Yes 9 0.15 No 0 0 No -32 0.56 No 29 84.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68712193 + NM_133509 RAD51B 0 . . . 1.32 0 21 5.87 Yes 18 1.16 Yes 0 0 No -24 0.9 Yes 40 89.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52443359 - NM_004656 BAP1 0 . . . 5.43 87.7 18 5.08 No 38 1.51 Yes 0 0 No -23 0.62 No 48 68.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108220501 + NM_000051 ATM 0 . . . 1.66 0 33 6.63 Yes 65 -4.34 No 0 0 No -32 0.68 Yes 42 66.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68639145 + NM_133509 RAD51B 0 . . . 0.59 80.26 34 6.32 Yes 10 0.44 No 0 0 No -26 0.77 Yes 45 82.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68987697 + NM_133509 RAD51B 0 . . . 4.07 83.32 24 5.17 No 22 1.21 Yes 0 0 No -23 0.76 Yes 36 96.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69053830 + NM_133509 RAD51B 0 . . . 0.11 0 27 5.74 Yes 44 -1.41 No 0 0 No -24 0.52 No 55 58.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29104319 - NM_001005735 CHEK2 0 . . . 5.13 90.11 18 3.93 No 61 -3.29 No 0 0 No -27 0.82 Yes 46 48.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68827258 + NM_133509 RAD51B 0 . . . 3.69 68.08 21 5.66 Yes 36 -2.94 No 0 0 No -20 0.58 No 41 54.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47704815 + NM_000251 MSH2 0 . . . 7.6 85.77 45 5.5 No 0 1.1 Yes 0 0 No -34 0.94 Yes 42 68.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68392335 + NM_133509 RAD51B 0 . . . 7.01 83.78 27 6.34 Yes 39 1.02 Yes 0 0 No -23 0.35 No 46 43.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68402735 + NM_133509 RAD51B 0 . . . 1.36 0 25 5.06 No 2 0.46 No 0 0 No -25 0.7 Yes 47 56.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68964201 + NM_133509 RAD51B 0 . . . 3.62 63.21 21 5.04 No 72 -3.55 No 0 0 No -20 0.73 Yes 36 19.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75499690 - NM_001040108 MLH3 0 . . . 0.6 61.81 20 4.36 No 29 -1.91 No 0 0 No -29 0.65 No 61 31.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41220428 - NM_007294 BRCA1 0 . . . 3.73 74.99 30 5.25 No 72 0.41 No 0 0 No -35 0.59 No 49 66.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68579992 + NM_133509 RAD51B 0 . . . 1.01 66.48 16 5.7 Yes 68 -4.86 No 0 0 No -21 0.81 Yes 38 63.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68381399 + NM_133509 RAD51B 0 . . . 2.61 78.62 21 4.23 No 15 1.4 Yes 0 0 No -26 0.5 No 43 96.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131952710 + NM_005732 RAD50 0 . . . 0.07 0 14 4 No 64 0.86 Yes 0 0 No -31 0.52 No 24 81.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59792416 - NM_032043 BRIP1 0 . . . 1.27 68.84 34 6.63 Yes 52 0.04 No 0 0 No -22 0.63 No 48 70.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108140613 + NM_000051 ATM 0 . . . 2.65 0 58 7.44 Yes 55 -2.26 No 0 0 No -24 0.81 Yes 24 73.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48032959 + NM_000179 MSH6 0 . . . 4.17 69.45 82 9.15 Yes 43 0.81 Yes 0 0 No -25 0.72 Yes 45 58.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37046189 + NM_000249 MLH1 0 . . . 0.23 59.45 26 6.4 Yes 38 0.74 No 0 0 No -28 0.49 No 43 87.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90970783 - NM_002485 NBN 0 . . . 1.26 81.98 27 5.2 No 64 -4.04 No 0 0 No -26 0.64 No 52 62.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47786637 + NM_000251 MSH2 0 . . . 2.66 70.98 68 10.53 Yes 40 1.04 Yes 0 0 No -22 0.64 No 46 64.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75486479 - NM_001040108 MLH3 0 . . . 0.23 71.3 16 4.69 No 21 0.04 No 0 0 No -19 0.65 No 33 67.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190706830 + NM_000534 PMS1 0 . . . 9.46 75.59 36 5.57 Yes 34 1.03 Yes 0 0 No -44 0.47 No 37 93.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68370792 + NM_133509 RAD51B 0 . . . 3.64 73.07 34 5.22 No 21 0.52 No 0 0 No -30 0.35 No 46 64.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108126454 + NM_000051 ATM 0 . . . 1.95 71 35 5.98 Yes 61 1.54 Yes 0 0 No -34 0.53 No 51 68.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68766430 + NM_133509 RAD51B 0 . . . 1.67 75.86 30 5.2 No 66 0.45 No 0 0 No -26 0.75 Yes 49 50.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47694157 + NM_000251 MSH2 0 . . . 3.95 75.03 18 5.74 Yes 19 0.4 No 0 0 No -26 0.74 Yes 39 62.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215639384 - NM_000465 BARD1 0 . . . 1.97 81.39 34 4.97 No 43 -2.45 No 0 0 No -25 0.61 No 48 79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69091997 + NM_133509 RAD51B 0 . . . 2.77 84.82 34 5.88 Yes 41 0 No 0 0 No -31 0.58 No 53 47.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646819 + NM_133509 RAD51B 0 . . . 1.5 65.81 23 8.43 Yes -2 0.18 No 0 0 No -27 0.63 No 49 82.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1211890 + NM_000455 STK11 0 . . . 5.62 78.99 19 5.65 Yes 57 -3.9 No 0 0 No -32 0.68 Yes 53 67.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69015712 + NM_133509 RAD51B 0 . . . 5.77 86.38 27 10.48 Yes 6 0.79 Yes 0 0 No -26 0.82 Yes 52 66.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68807975 + NM_133509 RAD51B 0 . . . 0.37 0 26 5 No 73 -6.01 No 0 0 No -25 0.83 Yes 53 78.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68490846 + NM_133509 RAD51B 0 . . . 4.97 82.41 23 4.85 No 22 0.04 No 0 0 No -22 0.77 Yes 36 71.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215650088 - NM_000465 BARD1 0 . . . 5.05 85.05 25 5.51 No 58 0.49 No 0 0 No -24 0.63 No 48 69.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33433031 - NM_002878 RAD51D 0 . . . 2.24 80.5 21 5.66 Yes 74 -5.09 No 0 0 No -25 0.79 Yes 16 54.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68589776 + NM_133509 RAD51B 0 . . . 1 0 20 6.38 Yes 40 0.1 No 0 0 No -24 0.43 No 18 55.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108131554 + NM_000051 ATM 0 . . . 3.07 84.6 18 4 No 75 -3.72 No 0 0 No -24 0.45 No 46 24.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59886280 - NM_032043 BRIP1 0 . . . 4.16 74.56 22 5.29 No 35 -3.88 No 0 0 No -21 0.39 No 52 36.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69092726 + NM_133509 RAD51B 0 . . . 0.72 60.28 22 6.86 Yes 60 0.04 No 0 0 No -21 0.96 Yes 49 77.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37072323 + NM_000249 MLH1 0 . . . 4.68 78.85 21 4.56 No 59 1 Yes 0 0 No -20 0.81 Yes 33 65.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69058587 + NM_133509 RAD51B 0 . . . 1.79 70.25 43 6.31 Yes 74 -6.89 No 0 0 No -31 0.82 Yes 40 92.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1219038 + NM_000455 STK11 0 . . . 0.05 64.68 26 5.17 No 75 0.32 No 0 0 No -25 0.49 No 47 60.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68404456 + NM_133509 RAD51B 0 . . . 5.15 82.57 35 6.72 Yes 7 0.75 No 0 0 No -34 0.42 No 51 92.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59761153 - NM_032043 BRIP1 0 . . . 3.11 69.19 23 4.67 No 4 1.08 Yes 0 0 No -22 0.66 No 47 57.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37063229 + NM_000249 MLH1 0 . . . 2.28 71.63 18 5.39 No 30 0.79 Yes 0 0 No -26 0.52 No 44 49.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52442809 - NM_004656 BAP1 0 . . . 8.04 85.21 18 4.8 No 11 0.71 No 0 0 No -21 0.53 No 47 95.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47799230 + NM_000251 MSH2 0 . . . 4.29 83.17 27 5.39 No 3 -1.14 No 0 0 No -26 0.58 No 41 67.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59902933 - NM_032043 BRIP1 0 . . . 2.38 0 22 5.67 Yes 9 1.09 Yes 0 0 No -30 0.44 No 49 68.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68852051 + NM_133509 RAD51B 0 . . . 0.23 0 27 5.03 No 11 0.5 No 0 0 No -26 0.94 Yes 47 87.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40997192 + NM_001164269 RAD51 0 . . . 4.61 66.47 18 4.18 No 76 0.91 Yes 0 0 No -48 0.71 Yes 52 93.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32924048 + NM_000059 BRCA2 0 . . . 1.93 85.05 13 4.08 No 49 0.28 No 0 0 No -16 0.55 No 49 23.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68414382 + NM_133509 RAD51B 0 . . . 2.33 82.58 14 4.47 No 75 0.37 No 0 0 No -19 0.5 No 48 44.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94154171 - NM_005591 MRE11 0 . . . 0.56 72.93 21 6.18 Yes 74 -2.88 No 0 0 No -20 0.53 No 19 89.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131926302 + NM_005732 RAD50 0 . . . 6.53 85.93 59 7.32 Yes 3 0.29 No 0 0 No -27 0.82 Yes 55 35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68492058 + NM_133509 RAD51B 0 . . . 2.81 80.43 32 5.57 Yes 32 0.34 No 0 0 No -26 0.58 No 35 75.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68516588 + NM_133509 RAD51B 0 . . . 3.91 0 26 6 Yes 52 1.31 Yes 0 0 No -25 0.67 Yes 49 56.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68818044 + NM_133509 RAD51B 0 . . . 1.05 59.38 18 4.22 No 49 -1.76 No 0 0 No -23 0.27 No 41 44.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68285508 + NM_133509 RAD51B 0 . . . 3.01 67.32 22 4.69 No 30 1.02 Yes 0 0 No -22 0.45 No 28 60.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32928284 + NM_000059 BRCA2 0 . . . 1.26 62.45 12 4.9 No 71 -6.15 No 0 0 No -21 0.67 Yes 43 48.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45806769 - NM_001048171 MUTYH 0 . . . 2.64 0 26 7.07 Yes 43 0.3 No 0 0 No -25 0.49 No 54 46.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68689860 + NM_133509 RAD51B 0 . . . 3 80.44 22 6.24 Yes 12 1.14 Yes 0 0 No -21 0.92 Yes 46 92.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68374855 + NM_133509 RAD51B 0 . . . 1.81 78.79 66 8.8 Yes 32 -4.26 No 0 0 No -27 0.81 Yes 39 66.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68863395 + NM_133509 RAD51B 0 . . . 6.88 73.81 34 5.76 Yes 47 0.24 No 0 0 No -33 0.36 No 44 90.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68644620 + NM_133509 RAD51B 0 . . . 5.07 88.81 37 5.9 Yes 7 0.58 No 0 0 No -36 0.53 No 51 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108191564 + NM_000051 ATM 0 . . . 1.81 78.28 17 5.65 Yes 73 1.4 Yes 0 0 No -26 0.8 Yes 51 65.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37071546 + NM_000249 MLH1 0 . . . 5.3 80.34 19 5.48 No 49 1.12 Yes 0 0 No -23 0.29 No 23 72.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32937714 + NM_000059 BRCA2 0 . . . 0.23 0 18 4.67 No 24 0.4 No 0 0 No -21 0.34 No 50 25.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69034476 + NM_133509 RAD51B 0 . . . 6.67 88.91 17 3.68 No 20 0.62 No 0 0 No -22 0.87 Yes 50 92.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68950049 + NM_133509 RAD51B 0 . . . 2.74 60.51 19 4.89 No 34 0.65 No 0 0 No -25 0.35 No 24 94.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131972552 + NM_005732 RAD50 0 . . . 5.25 78.98 18 4.9 No 58 0.22 No 0 0 No -17 0.76 Yes 42 82.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131919200 + NM_005732 RAD50 0 . . . 1.19 61.43 16 4.23 No 59 -5.8 No 0 0 No -21 0.64 No 59 33.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21976826 - NM_000077 CDKN2A 0 . . . 4.94 76.46 23 5.2 No 16 0.35 No 0 0 No -23 0.53 No 42 52.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89730045 + NM_000314 PTEN 0 . . . 0.37 0 24 4.17 No 63 -3.63 No 0 0 No -23 0.92 Yes 48 52.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47658717 + NM_000251 MSH2 0 . . . 0.43 63.97 46 7.07 Yes 24 0.9 Yes 0 0 No -33 0.64 No 49 58.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89655490 + NM_000314 PTEN 0 . . . 0.86 76.02 15 4.58 No 64 -4.51 No 0 0 No -26 0.57 No 57 27.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68994613 + NM_133509 RAD51B 0 . . . 1.96 83.82 29 5.57 Yes 9 0.51 No 0 0 No -28 0.51 No 42 51.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131961633 + NM_005732 RAD50 0 . . . 5.6 92 27 8.37 Yes 71 0.59 No 0 0 No -26 0.6 No 24 39.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45800464 - NM_001048171 MUTYH 0 . . . 5.59 78.88 42 5.87 Yes 52 0.52 No 0 0 No -42 0.33 No 52 59.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59928762 - NM_032043 BRIP1 0 . . . 2.51 81.84 29 5.57 Yes 40 -3.26 No 0 0 No -28 0.68 Yes 48 53.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215642807 - NM_000465 BARD1 0 . . . 0.05 0 12 4.76 No 45 0.97 Yes 0 0 No -42 0.43 No 38 34.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29124663 - NM_001005735 CHEK2 0 . . . 8.08 89.33 17 6.08 Yes 48 1.37 Yes 0 0 No -16 0.78 Yes 10 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68564788 + NM_133509 RAD51B 0 . . . 0.62 78.37 10 5.1 No 47 1.29 Yes 0 0 No -30 0.83 Yes 52 88.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215651452 - NM_000465 BARD1 0 . . . 5.91 79.39 26 5.59 Yes 13 0.05 No 0 0 No -20 0.45 No 45 81.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68821680 + NM_004360 CDH1 0 . . . 1.38 85.83 17 5.48 No 33 0.99 Yes 0 0 No -25 0.81 Yes 50 56.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6015582 - NM_000535 PMS2 0 . . . 2.63 67.47 17 4.69 No 65 1.69 Yes 0 0 No -36 0.53 No 45 64.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68499501 + NM_133509 RAD51B 0 . . . 8.38 87.77 23 5.17 No 8 1.29 Yes 0 0 No -55 0.46 No 50 93.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47678262 + NM_000251 MSH2 0 . . . 2.89 77.77 26 5.66 Yes 74 -6.76 No 0 0 No -25 0.93 Yes 51 69.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7589505 - NM_000546 TP53 0 . . . 0.11 0 18 7.24 Yes 76 -2.58 No 0 0 No -24 0.67 Yes 19 32.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68861853 + NM_133509 RAD51B 0 . . . 5.17 78.79 21 5.1 No 17 0.08 No 0 0 No -20 0.83 Yes 41 67.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59817939 - NM_032043 BRIP1 0 . . . 6.11 80.85 27 4.96 No 53 0.97 Yes 0 0 No -26 0.59 No 46 40.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68827346 + NM_004360 CDH1 0 . . . 4.4 75.99 40 6.35 Yes 60 1.33 Yes 0 0 No -26 0.39 No 18 62.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33443382 - NM_002878 RAD51D 0 . . . 1.72 65.04 25 5.29 No 64 -3.58 No 0 0 No -55 0.52 No 40 66.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89650076 + NM_000314 PTEN 0 . . . 0.28 63.94 25 5.97 Yes 73 0.52 No 0 0 No -24 0.97 Yes 20 68.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69127433 + NM_133509 RAD51B 0 . . . 1.67 74.12 40 6.36 Yes 66 1.5 Yes 0 0 No -39 0.61 No 46 94.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68536845 + NM_133509 RAD51B 0 . . . 3.57 76.91 22 5.12 No 15 0.88 Yes 0 0 No -24 0.88 Yes 43 93.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68947629 + NM_133509 RAD51B 0 . . . 5.41 81.81 38 6.63 Yes 64 0.01 No 0 0 No -37 0.83 Yes 40 82.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41268582 - NM_007294 BRCA1 0 . . . 2.05 74.33 26 6 Yes 58 -3.88 No 0 0 No -30 0.54 No 48 40.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215599878 - NM_000465 BARD1 0 . . . 3.68 71.36 24 5.47 No 62 0.78 Yes 0 0 No -23 0.47 No 45 76.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7584438 - NM_000546 TP53 0 . . . 0.98 66.93 26 4.76 No 57 -5.3 No 0 0 No -25 0.68 Yes 48 22.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68991661 + NM_133509 RAD51B 0 . . . 5.48 69.04 27 5.04 No 27 0.43 No 0 0 No -26 0.64 No 31 85.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59787096 - NM_032043 BRIP1 0 . . . 1.83 72.14 16 4.36 No 14 1.46 Yes 0 0 No -15 0.46 No 44 94.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108177307 + NM_000051 ATM 0 . . . 1.4 62.38 15 4.45 No 62 0.8 Yes 0 0 No -20 0.54 No 36 66.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41206724 - NM_007294 BRCA1 0 . . . 1.26 82.34 21 3.89 No 4 0 No 0 0 No -35 0.52 No 54 66.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69068947 + NM_133509 RAD51B 0 . . . 9.17 82.29 32 7.61 Yes 29 1.81 Yes 0 0 No -41 0.56 No 29 89.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68771902 + NM_133509 RAD51B 0 . . . 9.99 93.79 14 5.06 No 45 0.96 Yes 0 0 No -54 0.53 No 35 76.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89722439 + NM_000314 PTEN 0 . . . 6.6 75.19 28 5.14 No 24 0.69 No 0 0 No -27 0.85 Yes 49 37.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68839436 + NM_004360 CDH1 0 . . . 3.73 78.83 37 5.88 Yes 12 0.94 Yes 0 0 No -29 0.56 No 46 64.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131980114 + NM_005732 RAD50 0 . . . 3.1 62 16 4.69 No 50 -4.03 No 0 0 No -24 0.78 Yes 61 29.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94167689 - NM_005591 MRE11 0 . . . 0.72 0 25 5.57 Yes 62 -3.63 No 0 0 No -24 0.46 No 52 88.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59848639 - NM_032043 BRIP1 0 . . . 3.45 74.18 15 5.52 No 20 1.32 Yes 0 0 No -28 0.31 No 19 39.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68320312 + NM_133509 RAD51B 0 . . . 2.42 72.5 44 6.7 Yes 62 0.73 No 0 0 No -41 0.46 No 52 71.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108222481 + NM_000051 ATM 0 . . . 3.58 67.05 37 5.96 Yes 46 -2.56 No 0 0 No -32 0.59 No 42 74.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215612037 - NM_000465 BARD1 0 . . . 2.39 0 20 5.57 Yes 66 -4.73 No 0 0 No -24 0.51 No 33 46.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41244869 - NM_007294 BRCA1 0 . . . 4.29 72.57 18 4.65 No 64 0.11 No 0 0 No -39 0.49 No 42 74.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68660345 + NM_133509 RAD51B 0 . . . 2.11 66.87 11 4.12 No 51 0.08 No 0 0 No -30 0.85 Yes 46 90.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29090316 - NM_001005735 CHEK2 0 . . . 2.75 73.58 20 4.9 No 0 1 Yes 0 0 No -22 0.6 No 43 36.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68793284 + NM_133509 RAD51B 0 . . . 4.36 67.22 36 4.99 No 63 -2.75 No 0 0 No -35 0.53 No 46 74.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108178061 + NM_000051 ATM 0 . . . 6.8 80.12 22 6.3 Yes 7 1.36 Yes 0 0 No -24 0.88 Yes 51 87.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131979122 + NM_005732 RAD50 0 . . . 3.19 88.59 18 4.8 No 71 0.98 Yes 0 0 No -20 0.9 Yes 29 54.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68536809 + NM_133509 RAD51B 0 . . . 1.44 75.39 18 5.29 No 52 0.76 No 0 0 No -40 0.67 Yes 34 82.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32947150 + NM_000059 BRCA2 0 . . . 1.52 84.41 15 4 No 9 0.93 Yes 0 0 No -26 0.87 Yes 45 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59818063 - NM_032043 BRIP1 0 . . . 3.42 70.79 54 5.13 No 69 1.36 Yes 0 0 No -23 0.74 Yes 46 59.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108127465 + NM_000051 ATM 0 . . . 8.47 87.18 17 4.12 No 76 1.77 Yes 0 0 No -16 0.49 No 30 66.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94174762 - NM_005591 MRE11 0 . . . 5.21 75.84 42 6.76 Yes 30 0.5 No 0 0 No -41 0.35 No 39 66.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41009422 + NM_001164269 RAD51 0 . . . 0.24 68.98 25 4.47 No 65 1.11 Yes 0 0 No -24 0.5 No 37 29.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47675045 + NM_000251 MSH2 0 . . . 3.44 86.71 20 5.48 No 33 1.33 Yes 0 0 No -20 0.59 No 50 50.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68749552 + NM_133509 RAD51B 0 . . . 2.04 72.79 46 6.8 Yes 38 -2.98 No 0 0 No -29 0.68 Yes 46 40.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59908254 - NM_032043 BRIP1 0 . . . 4.11 68.73 17 4.77 No 76 0.29 No 0 0 No -16 0.72 Yes 48 66.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68557844 + NM_133509 RAD51B 0 . . . 2.92 61.75 34 6.93 Yes 28 0.4 No 0 0 No -33 0.72 Yes 29 67.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59833481 - NM_032043 BRIP1 0 . . . 3.79 72.2 14 7.51 Yes 24 0.47 No 0 0 No -39 0.62 No 34 48.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69011362 + NM_133509 RAD51B 0 . . . 5.4 84.32 31 6 Yes 66 -4.4 No 0 0 No -30 0.6 No 41 87.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94172988 - NM_005591 MRE11 0 . . . 5.52 71.53 18 5.02 No 6 1.8 Yes 0 0 No -24 0.59 No 52 82.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69127281 + NM_133509 RAD51B 0 . . . 1.51 0 81 7.95 Yes 33 -3.15 No 0 0 No -25 0.77 Yes 56 33.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59775770 - NM_032043 BRIP1 0 . . . 2.65 0 32 4.94 No 70 0.39 No 0 0 No -31 0.88 Yes 41 79.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32952708 + NM_000059 BRCA2 0 . . . 2 0 27 5.74 Yes 26 -2.14 No 0 0 No -26 0.89 Yes 48 85.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68334144 + NM_133509 RAD51B 0 . . . 1.06 77.38 84 6.45 Yes 72 -5.17 No 0 0 No -33 0.74 Yes 51 54.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108234858 + NM_000051 ATM 0 . . . 3.65 74.4 14 4.9 No 71 0.43 No 0 0 No -41 0.67 Yes 43 35.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75488527 - NM_001040108 MLH3 0 . . . 1.71 69.42 17 6.39 Yes 16 0.61 No 0 0 No -37 0.5 No 42 59.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640195 + NM_000251 MSH2 0 . . . 2.72 74.91 33 4.47 No 53 0.31 No 0 0 No -28 0.42 No 40 41.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48031567 + NM_000179 MSH6 0 . . . 5.93 75.28 19 5 No 63 0.46 No 0 0 No -52 0.83 Yes 35 81.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68612656 + NM_133509 RAD51B 0 . . . 3.67 77.35 27 5.2 No 15 0.02 No 0 0 No -26 0.58 No 43 90.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7575774 - NM_000546 TP53 0 . . . 3.51 88.34 9 5.38 No 57 0.97 Yes 0 0 No -22 0.54 No 44 56.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215640219 - NM_000465 BARD1 0 . . . 3.98 74.73 25 5.39 No 24 0.34 No 0 0 No -22 0.73 Yes 34 90.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68839542 + NM_004360 CDH1 0 . . . 5.96 90.14 33 7 Yes 3 0.79 Yes 0 0 No -32 0.91 Yes 49 47.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104169893 - NM_001100119 XRCC3 0 . . . 1.54 72.1 22 4.36 No NA NA NA 0 0 No -15 0.57 No 42 35.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807102 + NM_004360 CDH1 0 . . . 7.39 82.93 15 4.35 No 74 -2.28 No 0 0 No -26 0.58 No 35 67.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47681880 + NM_000251 MSH2 0 . . . 4.26 79.19 21 5.1 No 55 1.48 Yes 0 0 No -19 0.77 Yes 53 29.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68426045 + NM_133509 RAD51B 0 . . . 0.41 63.93 42 6.34 Yes -4 0.7 No 0 0 No -26 0.85 Yes 43 42.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68537372 + NM_133509 RAD51B 0 . . . 8.94 86.48 37 4.7 No 26 1.88 Yes 0 0 No -26 0.81 Yes 32 91.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41232480 - NM_007294 BRCA1 0 . . . 0.98 73.53 24 5.29 No 4 0.41 No 0 0 No -21 0.7 Yes 54 65.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152344188 - NM_005431 XRCC2 0 . . . 3.03 76.12 31 6.43 Yes 34 -2.73 No 0 0 No -27 0.53 No 47 56.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215660126 - NM_000465 BARD1 0 . . . 1.78 62.82 14 5.47 No 42 -1.53 No 0 0 No -26 0.75 Yes 28 39.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47805255 + NM_000251 MSH2 0 . . . 3.58 76.36 22 5.29 No 7 -2.25 No 0 0 No -22 0.8 Yes 48 43.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47740142 + NM_000251 MSH2 0 . . . 9.76 85.88 21 5.2 No 0 0.93 Yes 0 0 No -23 0.71 Yes 42 95.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7568306 - NM_000546 TP53 0 . . . 0.34 69.75 34 6.32 Yes 37 -3.53 No 0 0 No -18 0.27 No 44 73.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69090181 + NM_133509 RAD51B 0 . . . 0.43 0 22 7.28 Yes 38 -3.45 No 0 0 No -21 0.92 Yes 54 52.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47664377 + NM_000251 MSH2 0 . . . 0.44 67.06 21 5.2 No 1 0.09 No 0 0 No -20 0.59 No 51 47.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68736724 + NM_133509 RAD51B 0 . . . 9.65 83.92 52 6.27 Yes 60 -2.78 No 0 0 No -26 0.59 No 47 74.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32907259 + NM_000059 BRCA2 0 . . . 7.34 88.81 31 6 Yes 70 -4.48 No 0 0 No -30 0.9 Yes 53 50.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41260721 - NM_007294 BRCA1 0 . . . 2.3 84.41 46 5.16 No 34 1.35 Yes 0 0 No -20 0.84 Yes 38 62.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89682938 + NM_000314 PTEN 0 . . . 7.12 77.8 21 7.22 Yes 18 0.47 No 0 0 No -34 0.7 Yes 40 76.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108107392 + NM_000051 ATM 0 . . . 0.65 72.33 18 4.59 No 56 -5.78 No 0 0 No -20 0.64 No 56 26.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68390533 + NM_133509 RAD51B 0 . . . 7.13 82.52 26 5 No 70 -2.81 No 0 0 No -25 0.6 No 43 82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68665011 + NM_133509 RAD51B 0 . . . 8.39 86.43 11 4.1 No 14 1.82 Yes 0 0 No -28 0.9 Yes 44 86.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1221024 + NM_000455 STK11 0 . . . 2.54 67.3 17 4.5 No 24 0.31 No 0 0 No -20 0.38 No 45 65.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59764750 - NM_032043 BRIP1 0 . . . 0.31 65.25 22 4.69 No 3 0.05 No 0 0 No -21 0.96 Yes 55 64.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68531251 + NM_133509 RAD51B 0 . . . 3.9 72.52 16 4.69 No 9 1 Yes 0 0 No -48 0.39 No 49 92.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33445462 - NM_002878 RAD51D 0 . . . 2.55 76.22 34 7.09 Yes NA NA NA 0 0 No -31 0.69 Yes 50 49.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68939721 + NM_133509 RAD51B 0 . . . 6.36 75.74 31 5.74 Yes 50 1.36 Yes 0 0 No -30 0.91 Yes 46 72.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90990703 - NM_002485 NBN 0 . . . 7.53 83.98 22 5.83 Yes 68 1.51 Yes 0 0 No -21 0.72 Yes 44 81.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68968763 + NM_133509 RAD51B 0 . . . 2.17 67.84 12 5.1 No 8 1.25 Yes 0 0 No -30 0.59 No 41 36.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59808369 - NM_032043 BRIP1 0 . . . 0.89 53.94 17 4.58 No 34 -2.98 No 0 0 No -47 0.7 Yes 37 87.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104163747 - NM_001100119 XRCC3 0 . . . 7.05 86.42 24 5.13 No 42 1.23 Yes 0 0 No -23 0.85 Yes 48 86.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105173410 + NM_021930 RINT1 0 . . . 8.62 79.6 24 5.28 No 60 0.12 No 0 0 No -23 0.46 No 42 55.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94158386 - NM_005591 MRE11 0 . . . 1.18 66.41 31 4.29 No 69 0.79 Yes 0 0 No -30 0.67 Yes 40 66.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69148188 + NM_133509 RAD51B 0 . . . 2.25 72.1 27 5.2 No 2 0.09 No 0 0 No -26 0.71 Yes 56 30.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131943693 + NM_005732 RAD50 0 . . . 0.38 68.95 56 9.79 Yes 6 0.44 No 0 0 No -30 0.95 Yes 48 52.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68868569 + NM_004360 CDH1 0 . . . 0.56 77.98 32 4.49 No 73 0.79 Yes 0 0 No -21 0.56 No 47 93.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68453493 + NM_133509 RAD51B 0 . . . 4.22 84.95 31 6.52 Yes 63 0.71 No 0 0 No -30 0.48 No 44 62.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68620044 + NM_133509 RAD51B 0 . . . 2.22 79.58 21 4.58 No 42 0.15 No 0 0 No -20 0.86 Yes 47 46.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108133478 + NM_000051 ATM 0 . . . 4.46 80.67 41 7.76 Yes -4 0.55 No 0 0 No -34 0.53 No 48 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68864689 + NM_133509 RAD51B 0 . . . 8.93 85.89 17 4.78 No 76 0.13 No 0 0 No -20 0.48 No 49 53.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41252886 - NM_007294 BRCA1 0 . . . 2.43 69.9 46 7.06 Yes 30 -2.21 No 0 0 No -23 0.55 No 43 92.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59770833 - NM_032043 BRIP1 0 . . . 0.6 0 19 6 Yes 51 1.03 Yes 0 0 No -18 0.76 Yes 49 90.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108123826 + NM_000051 ATM 0 . . . 3.1 68.19 32 5.65 Yes 24 -3.57 No 0 0 No -31 0.5 No 48 44.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68458121 + NM_133509 RAD51B 0 . . . 8.49 86.28 18 4.9 No 9 1.8 Yes 0 0 No -36 0.58 No 49 89.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108100133 + NM_000051 ATM 0 . . . 3.62 0 32 7.14 Yes 18 0.51 No 0 0 No -31 0.47 No 40 60.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47660478 + NM_000251 MSH2 0 . . . 4.64 82.75 9 4.58 No 50 2.21 Yes 0 0 No -41 0.29 No 50 40.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41223972 - NM_007294 BRCA1 0 . . . 1.57 73.91 24 5.67 Yes -4 0.11 No 0 0 No -23 0.63 No 49 40.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68434562 + NM_133509 RAD51B 0 . . . 7.31 76.41 9 5 No 60 -1.87 No 0 0 No -23 0.41 No 46 66.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108175091 + NM_000051 ATM 0 . . . 2.23 70.63 23 3.89 No 19 2.17 Yes 0 0 No -22 0.58 No 39 94.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56803717 + NM_058216 RAD51C 0 . . . 4.01 73.82 13 4.36 No 9 1.21 Yes 0 0 No -34 0.56 No 34 65.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215642238 - NM_000465 BARD1 0 . . . 4.63 80.52 24 5.23 No 75 0.79 Yes 0 0 No -50 0.46 No 44 87.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68469837 + NM_133509 RAD51B 0 . . . 2.73 76.95 20 4.95 No 3 0.4 No 0 0 No -19 0.7 Yes 43 56.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59758515 - NM_032043 BRIP1 0 . . . 2.57 68.8 29 6.32 Yes 25 -2.43 No 0 0 No -28 0.79 Yes 33 36.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190688867 + NM_000534 PMS1 0 . . . 3.19 82.54 23 5.83 Yes 54 1.11 Yes 0 0 No -22 0.8 Yes 53 49.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68871830 + NM_133509 RAD51B 0 . . . 6.99 80 14 3.68 No 21 1.16 Yes 0 0 No -17 0.39 No 49 95.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68883777 + NM_133509 RAD51B 0 . . . 4.24 71.64 45 7.01 Yes -4 0.39 No 0 0 No -31 0.45 No 44 69.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94227307 - NM_005591 MRE11 0 . . . 4.72 80.34 40 6.49 Yes -4 1.36 Yes 0 0 No -29 0.36 No 53 28.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69048313 + NM_133509 RAD51B 0 . . . 0.61 0 13 4.79 No 63 -4.35 No 0 0 No -24 0.43 No 47 69.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68611001 + NM_133509 RAD51B 0 . . . 12.85 90.18 19 7.07 Yes 16 1.21 Yes 0 0 No -18 0.64 No 42 80.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68574156 + NM_133509 RAD51B 0 . . . 1.97 63.06 21 5.12 No 69 -5.05 No 0 0 No -42 0.65 No 37 62.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69079371 + NM_133509 RAD51B 0 . . . 0.03 62.01 22 5.29 No 7 0.8 Yes 0 0 No -21 0.58 No 51 34.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215591531 - NM_000465 BARD1 0 . . . 3.08 67.47 29 5.31 No -3 1.27 Yes 0 0 No -28 0.56 No 30 81.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68303978 + NM_133509 RAD51B 0 . . . 0.04 76.11 25 5.09 No 5 0.1 No 0 0 No -24 0.72 Yes 38 62.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59754781 - NM_032043 BRIP1 0 . . . 1.88 0 30 5.74 Yes 48 0.54 No 0 0 No -26 0.44 No 46 49.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68638334 + NM_133509 RAD51B 0 . . . 6.68 82.5 28 4.61 No 76 1.53 Yes 0 0 No -27 0.88 Yes 53 49.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68605429 + NM_133509 RAD51B 0 . . . 4.29 78.82 37 6.16 Yes 13 1.07 Yes 0 0 No -36 0.8 Yes 45 77.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6012521 - NM_000535 PMS2 0 . . . 1.43 76.63 20 7 Yes 58 -3.88 No 0 0 No -19 0.74 Yes 43 42.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68567200 + NM_133509 RAD51B 0 . . . 1.21 60.46 15 4.58 No 64 0.88 Yes 0 0 No -20 0.45 No 58 25.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68636026 + NM_133509 RAD51B 0 . . . 6.24 86.77 28 5.83 Yes 64 -3.9 No 0 0 No -27 0.5 No 42 67.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215663740 - NM_000465 BARD1 0 . . . 1.84 86.33 27 5.93 Yes 3 0.65 No 0 0 No -26 0.81 Yes 50 52.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68859479 + NM_004360 CDH1 0 . . . 4.8 71.8 28 5.2 No 53 -0.85 No 0 0 No -27 0.38 No 30 68.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215607650 - NM_000465 BARD1 0 . . . 5.75 73.08 19 5.19 No 72 0.67 No 0 0 No -29 0.56 No 47 77.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23650147 - NM_024675 PALB2 0 . . . 2.61 0 26 5.05 No 26 0.94 Yes 0 0 No -25 0.57 No 46 69.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69054941 + NM_133509 RAD51B 0 . . . 6.36 81.76 17 4.55 No 16 1.41 Yes 0 0 No -27 0.53 No 42 83.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68940065 + NM_133509 RAD51B 0 . . . 0.81 0 34 6.81 Yes 68 0.65 No 0 0 No -33 0.64 No 48 36.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89649901 + NM_000314 PTEN 0 . . . 1.05 0 13 4.57 No 24 0.33 No 0 0 No -23 0.26 No 56 45.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6009916 - NM_000535 PMS2 0 . . . 3.76 72.37 19 5 No 51 0.48 No 0 0 No -23 0.41 No 50 53.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131975886 + NM_005732 RAD50 0 . . . 4.1 0 21 4.36 No 23 1.35 Yes 0 0 No -20 0.61 No 35 64.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59777030 - NM_032043 BRIP1 0 . . . 1.47 73.11 36 5.28 No 31 0.72 No 0 0 No -35 0.81 Yes 27 45.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56778054 + NM_058216 RAD51C 0 . . . 2.75 80.37 18 4.25 No 73 1.74 Yes 0 0 No -41 0.43 No 47 81.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131974630 + NM_005732 RAD50 0 . . . 0.09 0 13 5.74 Yes 10 0.21 No 0 0 No -11 0.7 Yes 48 63.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220779 - NM_007294 BRCA1 0 . . . 3.66 81.54 49 7.28 Yes 30 1.63 Yes 0 0 No -36 0.61 No 46 83.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68903675 + NM_133509 RAD51B 0 . . . 0.53 71.4 21 5.08 No 60 0.78 Yes 0 0 No -20 0.72 Yes 49 92.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47793641 + NM_000251 MSH2 0 . . . 0.57 0 19 3.6 No 9 1.05 Yes 0 0 No -32 0.43 No 44 49.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89652919 + NM_000314 PTEN 0 . . . 5.23 75.92 15 5.3 No 12 0.92 Yes 0 0 No -25 0.51 No 46 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108200154 + NM_000051 ATM 0 . . . 1.79 84.41 49 7.71 Yes 55 0.28 No 0 0 No -34 0.72 Yes 17 56.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89693771 + NM_000314 PTEN 0 . . . 4.92 80.34 40 7.34 Yes 76 0.55 No 0 0 No -39 0.71 Yes 43 94.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59835402 - NM_032043 BRIP1 0 . . . 1.44 59.58 34 5.12 No 40 0.55 No 0 0 No -33 0.48 No 45 66.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104163130 - NM_001100119 XRCC3 0 . . . 2.74 0 30 5.54 No 73 2.13 Yes 0 0 No -29 0.42 No 55 39.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68314433 + NM_133509 RAD51B 0 . . . 5.72 72.3 17 4.37 No 25 1.36 Yes 0 0 No -20 0.94 Yes 44 59.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59875352 - NM_032043 BRIP1 0 . . . 5.82 72.7 9 3.87 No 38 -3.44 No 0 0 No -34 0.45 No 45 68.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94165558 - NM_005591 MRE11 0 . . . 2.23 0 45 7.4 Yes 63 -3.44 No 0 0 No -44 0.39 No 46 42.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190693670 + NM_000534 PMS1 0 . . . 0.41 65.76 13 4.99 No 59 0.17 No 0 0 No -21 0.78 Yes 50 49.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37080156 + NM_000249 MLH1 0 . . . 4.23 77.65 16 6.08 Yes 35 1.42 Yes 0 0 No -34 0.36 No 33 85.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21983601 - NM_000077 CDKN2A 0 . . . 1.35 67.79 33 5.84 Yes 47 0.21 No 0 0 No -32 0.52 No 37 42.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68799382 + NM_133509 RAD51B 0 . . . 8.91 84.54 16 4.54 No 35 1.05 Yes 0 0 No -15 0.53 No 47 91.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90996459 - NM_002485 NBN 0 . . . 7.41 75.33 22 5.81 Yes 28 2.45 Yes 0 0 No -27 0.35 No 30 50.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59849613 - NM_032043 BRIP1 0 . . . 5.33 76.06 19 5.48 No 35 1.13 Yes 0 0 No -26 0.65 No 50 62.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68529929 + NM_133509 RAD51B 0 . . . 5.76 80.31 26 6.36 Yes 45 0.87 Yes 0 0 No -25 0.93 Yes 38 64.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68540215 + NM_133509 RAD51B 0 . . . 10.47 88.75 20 4.02 No 12 0.59 No 0 0 No -19 0.48 No 42 58.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41216652 - NM_007294 BRCA1 0 . . . 7.73 83.32 31 5.74 Yes 59 -3.11 No 0 0 No -30 0.59 No 38 36.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68330052 + NM_133509 RAD51B 0 . . . 0.32 66.12 30 6.27 Yes 54 1.19 Yes 0 0 No -29 0.82 Yes 45 70.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47671110 + NM_000251 MSH2 0 . . . 2.96 68.23 17 6.16 Yes 13 0.59 No 0 0 No -26 0.63 No 45 80.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68502344 + NM_133509 RAD51B 0 . . . 0.09 74.04 26 5.66 Yes 62 -5.04 No 0 0 No -25 0.92 Yes 40 45.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69007926 + NM_133509 RAD51B 0 . . . 6.05 86.58 13 3.97 No 71 -2.08 No 0 0 No -16 0.43 No 51 85.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33438371 - NM_002878 RAD51D 0 . . . 4.46 84.41 14 3.9 No 27 -0.77 No 0 0 No -24 0.86 Yes 33 69.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131929131 + NM_005732 RAD50 0 . . . 0.05 69.14 29 5.48 No 5 0.96 Yes 0 0 No -28 0.5 No 43 45.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41201165 - NM_007294 BRCA1 0 . . . 2.05 77.56 17 3.69 No 49 0.83 Yes 0 0 No -22 0.38 No 44 90.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89659728 + NM_000314 PTEN 0 . . . 6.01 71.1 19 5 No 22 -2.15 No 0 0 No -37 0.61 No 44 49.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1229504 + NM_000455 STK11 0 . . . 2.59 73.26 21 4.8 No NA NA NA 0 0 No -23 0.84 Yes 46 34.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47797323 + NM_000251 MSH2 0 . . . 6.18 75.02 27 5.3 No NA NA NA 0 0 No -22 0.37 No 50 26.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68833873 + NM_133509 RAD51B 0 . . . 0.66 72.24 18 4.8 No 59 0.02 No 0 0 No -21 0.66 No 37 67.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68392032 + NM_133509 RAD51B 0 . . . 6.74 84.41 24 5.1 No 34 0.58 No 0 0 No -23 0.45 No 24 85.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215641627 - NM_000465 BARD1 0 . . . 4.02 78.86 46 6.16 Yes 32 1.37 Yes 0 0 No -41 0.37 No 36 79.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152373809 - NM_005431 XRCC2 0 . . . 2.29 68.27 17 4.69 No 46 1.19 Yes 0 0 No -22 0.48 No 12 44.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37079010 + NM_000249 MLH1 0 . . . 0.07 0 22 5.1 No 49 0.64 No 0 0 No -19 0.71 Yes 13 59.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68428678 + NM_133509 RAD51B 0 . . . 1.64 60.14 32 7.71 Yes 19 -2.99 No 0 0 No -31 0.48 No 46 52.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108162722 + NM_000051 ATM 0 . . . 8.01 77.62 41 4.17 No 55 0.22 No 0 0 No -28 0.62 No 44 82.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94212842 - NM_005591 MRE11 0 . . . 4.41 78.88 23 4.69 No 40 0.44 No 0 0 No -22 0.75 Yes 46 92.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59915987 - NM_032043 BRIP1 0 . . . 1.72 75.07 26 5.55 No 23 1.08 Yes 0 0 No -25 0.65 No 46 46.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68771342 + NM_133509 RAD51B 0 . . . 2.83 82.24 16 4.51 No 20 0.15 No 0 0 No -19 0.24 No 55 52.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94227569 - NM_005591 MRE11 0 . . . 1.56 70.37 16 4.35 No -3 0.53 No 0 0 No -25 0.92 Yes 61 59.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68684594 + NM_133509 RAD51B 0 . . . 4.62 73.8 21 5.1 No 23 -2.37 No 0 0 No -20 0.8 Yes 39 47.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41251956 - NM_007294 BRCA1 0 . . . 3.36 0 20 4.9 No 37 0.92 Yes 0 0 No -19 0.79 Yes 25 62.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68485147 + NM_133509 RAD51B 0 . . . 2.78 77.68 24 3.77 No 23 0.97 Yes 0 0 No -24 0.89 Yes 46 50.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56772576 + NM_058216 RAD51C 0 . . . 8.6 84.31 35 6.07 Yes 11 0.26 No 0 0 No -34 0.69 Yes 46 51.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68852853 + NM_004360 CDH1 0 . . . 6.92 87.26 12 4.24 No 9 1.13 Yes 0 0 No -29 0.66 Yes 49 93.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152357368 - NM_005431 XRCC2 0 . . . 3.86 68.09 31 5.31 No 20 0.67 No 0 0 No -59 0.92 Yes 32 91.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68706207 + NM_133509 RAD51B 0 . . . 2.35 68.59 18 4.45 No 8 1.05 Yes 0 0 No -57 0.59 No 50 59.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56768152 + NM_058216 RAD51C 0 . . . 3.8 75.97 16 4.99 No 17 0.36 No 0 0 No -22 0.46 No 41 47.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47737783 + NM_000251 MSH2 0 . . . 7.24 88 21 6.08 Yes 17 0.87 Yes 0 0 No -23 0.51 No 45 47.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41226771 - NM_007294 BRCA1 0 . . . 7.45 79.97 13 5 No 4 2.14 Yes 0 0 No -28 0.45 No 50 50.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89710576 + NM_000314 PTEN 0 . . . 6.7 87.26 16 4.69 No 9 0.44 No 0 0 No -54 0.32 No 49 88.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68776813 + NM_004360 CDH1 0 . . . 3.02 71.74 28 5.38 No 7 0.76 No 0 0 No -27 0.82 Yes 30 92.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32951875 + NM_000059 BRCA2 0 . . . 2.95 0 48 8.07 Yes 1 0.75 No 0 0 No -24 0.41 No 39 43.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47768365 + NM_000251 MSH2 0 . . . 12.85 89.5 32 4.29 No 57 2.01 Yes 0 0 No -31 0.64 No 32 92.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23641476 - NM_024675 PALB2 0 . . . 0.22 66.4 66 6.55 Yes 3 0.09 No 0 0 No -36 0.46 No 48 48.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68754628 + NM_133509 RAD51B 0 . . . 1.1 78.25 23 5.26 No 54 -3.79 No 0 0 No -22 0.81 Yes 53 67.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131978372 + NM_005732 RAD50 0 . . . 3.98 76.11 41 6.11 Yes 69 -2.13 No 0 0 No -40 0.49 No 43 59.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47742590 + NM_000251 MSH2 0 . . . 2.27 82.5 51 4.34 No 19 0.9 Yes 0 0 No -33 0.72 Yes 46 84.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108113260 + NM_000051 ATM 0 . . . 1.26 67.98 37 7.02 Yes 29 1.17 Yes 0 0 No -36 0.51 No 50 59.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68978691 + NM_133509 RAD51B 0 . . . 0.6 0 14 4.88 No 12 1.38 Yes 0 0 No -21 0.72 Yes 46 87.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94159792 - NM_005591 MRE11 0 . . . 6.59 83.29 62 8.65 Yes 66 0.66 No 0 0 No -24 0.5 No 45 58.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90981605 - NM_002485 NBN 0 . . . 2.1 76.91 19 4.19 No 6 0.65 No 0 0 No -18 0.81 Yes 27 52.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69092557 + NM_133509 RAD51B 0 . . . 8.37 91.53 29 5.25 No 36 0.85 Yes 0 0 No -28 0.53 No 49 76.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190674231 + NM_000534 PMS1 0 . . . 1.24 74.8 45 8.62 Yes 60 0.1 No 0 0 No -35 0.7 Yes 14 15.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68848109 + NM_004360 CDH1 0 . . . 2.97 76.63 41 5.7 Yes 58 -3.88 No 0 0 No -20 0.68 Yes 43 60.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68583178 + NM_133509 RAD51B 0 . . . 0.64 65.54 20 5.7 Yes 72 -5.69 No 0 0 No -26 0.92 Yes 47 86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89627826 + NM_000314 PTEN 0 . . . 3.66 71.46 10 3.79 No 38 1.51 Yes 0 0 No -28 0.7 Yes 20 43.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105201654 + NM_021930 RINT1 0 . . . 2.22 69.55 19 5.47 No 15 0.57 No 0 0 No -23 0.78 Yes 48 36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190660072 + NM_000534 PMS1 0 . . . 3.82 71.15 24 5.68 Yes 71 -4.86 No 0 0 No -32 0.31 No 46 45.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68813112 + NM_133509 RAD51B 0 . . . 2.85 59.16 32 5.54 No 64 1.55 Yes 0 0 No -31 0.33 No 35 84.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68746656 + NM_133509 RAD51B 0 . . . 8.58 81.73 24 5.48 No 2 0.74 No 0 0 No -20 0.53 No 33 40.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37056790 + NM_000249 MLH1 0 . . . 10.92 90.85 20 3.72 No 67 1.05 Yes 0 0 No -23 0.33 No 45 87.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152345123 - NM_005431 XRCC2 0 . . . 6.07 89.51 25 5.31 No 56 0.8 Yes 0 0 No -28 0.67 Yes 50 69.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68983178 + NM_133509 RAD51B 0 . . . 4.7 72.91 33 6.24 Yes 76 1 Yes 0 0 No -17 0.53 No 46 95.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47718410 + NM_000251 MSH2 0 . . . 5.2 85.02 12 4.9 No 5 1.23 Yes 0 0 No -17 0.48 No 53 73.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68315567 + NM_133509 RAD51B 0 . . . 5.33 76.13 14 5.06 No 43 1.13 Yes 0 0 No -25 0.26 No 45 45.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59895924 - NM_032043 BRIP1 0 . . . 8.32 86.34 24 5.28 No 31 1.13 Yes 0 0 No -23 0.39 No 42 93.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105181446 + NM_021930 RINT1 0 . . . 2.29 68.84 23 5.29 No 34 -2.11 No 0 0 No -22 0.74 Yes 48 73.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68438875 + NM_133509 RAD51B 0 . . . 10.28 87.73 40 5.25 No 66 2.15 Yes 0 0 No -39 0.35 No 39 74.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68499820 + NM_133509 RAD51B 0 . . . 6.12 75.18 12 5.74 Yes 21 0.52 No 0 0 No -26 0.38 No 47 55.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68489471 + NM_133509 RAD51B 0 . . . 5.08 82.73 28 4.41 No 2 0.07 No 0 0 No -24 0.35 No 51 49.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68465141 + NM_133509 RAD51B 0 . . . 5.98 69.05 35 7.27 Yes 66 0.21 No 0 0 No -27 0.61 No 57 35.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75490637 - NM_001040108 MLH3 0 . . . 2.02 67.47 54 5.82 Yes 12 0.27 No 0 0 No -40 0.45 No 46 72.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190741324 + NM_000534 PMS1 0 . . . 8.24 83.5 25 4.9 No 54 1.52 Yes 0 0 No -36 0.79 Yes 35 51.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68333319 + NM_133509 RAD51B 0 . . . 1.41 78.9 29 4.78 No 46 1.07 Yes 0 0 No -29 0.48 No 12 55.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59854784 - NM_032043 BRIP1 0 . . . 2.9 77.82 10 4.43 No 30 1.18 Yes 0 0 No -20 0.68 Yes 50 78.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37033858 + NM_000249 MLH1 0 . . . 1.26 73.1 26 5.2 No 59 -3.5 No 0 0 No -25 0.86 Yes 49 77.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68461307 + NM_133509 RAD51B 0 . . . 2.17 67.82 15 4.44 No 73 -3.94 No 0 0 No -21 0.37 No 48 73.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68393465 + NM_133509 RAD51B 0 . . . 4.81 84.47 16 4.69 No 7 1.02 Yes 0 0 No -23 0.52 No 51 80.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215623556 - NM_000465 BARD1 0 . . . 1.33 72.08 47 5.83 Yes 39 0.5 No 0 0 No -25 0.73 Yes 19 57.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69091402 + NM_133509 RAD51B 0 . . . 2.39 71.69 11 4.69 No 28 -3.24 No 0 0 No -21 0.65 No 44 37.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645778 - NM_024675 PALB2 0 . . . 4.11 81.92 44 7.09 Yes 35 1.55 Yes 0 0 No -36 0.69 Yes 23 89.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47756493 + NM_000251 MSH2 0 . . . 5.42 72.82 26 5.85 Yes 50 0.65 No 0 0 No -30 0.59 No 50 91.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190712608 + NM_000534 PMS1 0 . . . 9.39 81.14 19 4.16 No 30 0.72 No 0 0 No -19 0.73 Yes 42 74.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68473891 + NM_133509 RAD51B 0 . . . 2.6 75.77 15 5.48 No 32 0.96 Yes 0 0 No -27 0.2 No 53 83.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190730890 + NM_000534 PMS1 0 . . . 5.53 78.26 21 5.1 No 17 1.46 Yes 0 0 No -20 0.62 No 41 80.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68865407 + NM_133509 RAD51B 0 . . . 1.74 77.46 30 5.74 Yes 31 1.02 Yes 0 0 No -29 0.9 Yes 37 95.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59844371 - NM_032043 BRIP1 0 . . . 3.16 75.91 18 4.9 No 63 0.95 Yes 0 0 No -26 0.65 No 41 67.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1213313 + NM_000455 STK11 0 . . . 2.29 75.03 16 4.46 No 75 1.68 Yes 0 0 No -19 0.77 Yes 51 57.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90995739 - NM_002485 NBN 0 . . . 2.45 71.84 27 5.16 No 11 0.42 No 0 0 No -20 0.47 No 47 96.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59804497 - NM_032043 BRIP1 0 . . . 7.09 88.14 33 6.7 Yes 9 0.32 No 0 0 No -33 0.71 Yes 46 78.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32909627 + NM_000059 BRCA2 0 . . . 1.53 0 18 5.68 Yes 24 0.65 No 0 0 No -17 0.55 No 34 54.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90994427 - NM_002485 NBN 0 . . . 7.05 83.86 29 5.74 Yes 3 0.9 Yes 0 0 No -28 0.74 Yes 40 60.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68790930 + NM_133509 RAD51B 0 . . . 2.83 76.97 21 6.55 Yes 11 0.99 Yes 0 0 No -20 0.86 Yes 42 77.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108234702 + NM_000051 ATM 0 . . . 1.06 66.68 27 5.72 Yes 37 0.79 Yes 0 0 No -31 0.76 Yes 21 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29125955 - NM_001005735 CHEK2 0 . . . 0.49 0 13 6.46 Yes 62 0.62 No 0 0 No -29 0.58 No 48 60.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131958653 + NM_005732 RAD50 0 . . . 0.07 66.83 23 4.69 No -4 0.71 No 0 0 No -19 0.53 No 62 53.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29091617 - NM_001005735 CHEK2 0 . . . 6.56 87.63 18 5.25 No 66 0.02 No 0 0 No -40 0.33 No 43 88.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94158964 - NM_005591 MRE11 0 . . . 2.96 70.15 25 5.33 No 51 1.1 Yes 0 0 No -22 0.79 Yes 39 80.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131903557 + NM_005732 RAD50 0 . . . 1.03 65.43 22 5.1 No 0 0.19 No 0 0 No -27 0.71 Yes 50 45.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89733545 + NM_000314 PTEN 0 . . . 3.9 77.62 29 5.92 Yes 40 1.02 Yes 0 0 No -28 0.74 Yes 47 56.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47649136 + NM_000251 MSH2 0 . . . 2.23 83.95 19 4.8 No 19 0.23 No 0 0 No -19 0.49 No 49 81.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68335388 + NM_133509 RAD51B 0 . . . 0.64 0 28 5.83 Yes -2 0.93 Yes 0 0 No -27 0.77 Yes 56 45.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68587598 + NM_133509 RAD51B 0 . . . 5.76 91.29 38 6.4 Yes 8 0.28 No 0 0 No -37 0.59 No 50 80.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90998657 - NM_002485 NBN 0 . . . 8.69 81.48 39 5.3 No 13 0.52 No 0 0 No -38 0.34 No 42 56.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68600209 + NM_133509 RAD51B 0 . . . 3.65 83.86 25 4.2 No 11 0.97 Yes 0 0 No -24 0.71 Yes 40 67.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37079434 + NM_000249 MLH1 0 . . . 0.5 70.27 51 7.4 Yes 51 1.01 Yes 0 0 No -21 0.45 No 51 30.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68971838 + NM_133509 RAD51B 0 . . . 1.42 73.29 23 5.58 Yes 52 0.37 No 0 0 No -20 0.44 No 43 74.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190719377 + NM_000534 PMS1 0 . . . 1.12 72.54 26 6.63 Yes 4 0.55 No 0 0 No -25 0.72 Yes 50 60.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131948223 + NM_005732 RAD50 0 . . . 3.82 52.63 29 5.48 No 9 0.41 No 0 0 No -28 0.82 Yes 44 81.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108241780 + NM_000051 ATM 0 . . . 4.18 79.26 19 4.9 No -4 0.4 No 0 0 No -22 0.82 Yes 44 45.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68782975 + NM_004360 CDH1 0 . . . 6.24 82.31 39 5.71 Yes 57 1.15 Yes 0 0 No -38 0.72 Yes 55 50.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41195091 - NM_007294 BRCA1 0 . . . 7.35 83.33 30 6 Yes 23 0.19 No 0 0 No -29 0.68 Yes 35 73.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131965997 + NM_005732 RAD50 0 . . . 3.68 70.85 18 4.24 No 21 1 Yes 0 0 No -38 0.62 No 37 68.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131968582 + NM_005732 RAD50 0 . . . 6.6 75.47 19 7.52 Yes 48 1.66 Yes 0 0 No -18 0.47 No 51 58.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68293139 + NM_133509 RAD51B 0 . . . 6.22 70.64 13 3.87 No 32 0.49 No 0 0 No -12 0.39 No 46 80.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47801561 + NM_000251 MSH2 0 . . . 0.97 78.34 30 5.66 Yes 13 1.04 Yes 0 0 No -29 0.8 Yes 45 91.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48021541 + NM_000179 MSH6 0 . . . 0.13 0 25 5.2 No 45 1.12 Yes 0 0 No -24 0.67 Yes 13 38.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59770487 - NM_032043 BRIP1 0 . . . 1.62 73.98 28 5.39 No 25 1.09 Yes 0 0 No -23 0.78 Yes 50 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59863187 - NM_032043 BRIP1 0 . . . 4.32 0 25 4.97 No 36 0.29 No 0 0 No -24 0.96 Yes 44 91.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68679040 + NM_133509 RAD51B 0 . . . 3.93 69.86 12 5 No 11 0.71 No 0 0 No -28 0.63 No 47 33.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68643211 + NM_133509 RAD51B 0 . . . 0.37 0 14 4.47 No -1 0.14 No 0 0 No -40 0.38 No 46 77.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47786689 + NM_000251 MSH2 0 . . . 0.54 59.94 25 6 Yes 22 0.86 Yes 0 0 No -24 0.78 Yes 36 93.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6031997 - NM_000535 PMS2 0 . . . 3.13 79.33 10 5 No 54 -4.94 No 0 0 No -37 0.6 No 47 43.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190735135 + NM_000534 PMS1 0 . . . 5.79 80.31 16 4.69 No 35 0.9 Yes 0 0 No -19 0.33 No 49 48.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190675401 + NM_000534 PMS1 0 . . . 0.23 63.76 34 6.63 Yes 74 0.48 No 0 0 No -33 0.44 No 52 30.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68859670 + NM_004360 CDH1 0 . . . 5.04 76.86 28 6.65 Yes 56 1.17 Yes 0 0 No -30 0.68 Yes 44 75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75483218 - NM_001040108 MLH3 0 . . . 5.35 83.34 22 5.29 No 57 -1 No 0 0 No -21 0.45 No 48 55.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68292361 + NM_133509 RAD51B 0 . . . 7.7 82.69 22 5.29 No 19 0.78 Yes 0 0 No -21 0.75 Yes 46 90.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68393399 + NM_133509 RAD51B 0 . . . 1.08 84.22 20 3.62 No 33 1.13 Yes 0 0 No -19 0.49 No 50 40.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59917412 - NM_032043 BRIP1 0 . . . 5.19 70.5 29 7.14 Yes 75 0.92 Yes 0 0 No -28 0.78 Yes 41 47.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59865017 - NM_032043 BRIP1 0 . . . 1.11 66.08 35 6.08 Yes 50 -2.1 No 0 0 No -34 0.64 No 53 33.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68955557 + NM_133509 RAD51B 0 . . . 1.39 0 43 5.81 Yes 46 1.06 Yes 0 0 No -42 0.94 Yes 42 75.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59765589 - NM_032043 BRIP1 0 . . . 2.76 68.34 23 5.08 No 18 0.66 No 0 0 No -30 0.66 No 40 81.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47676524 + NM_000251 MSH2 0 . . . 3.64 0 15 5.17 No 70 1.97 Yes 0 0 No -24 0.84 Yes 59 28.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41025383 + NM_001164269 RAD51 0 . . . 2.44 80.22 20 5.57 Yes 58 -3.88 No 0 0 No -24 0.77 Yes 43 44.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215657537 - NM_000465 BARD1 0 . . . 0.47 0 24 5.09 No 45 -5.1 No 0 0 No -23 0.84 Yes 43 44.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47740466 + NM_000251 MSH2 0 . . . 7.15 84.81 27 5.57 Yes 27 1.51 Yes 0 0 No -26 0.71 Yes 47 81.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68890786 + NM_133509 RAD51B 0 . . . 7.94 82.15 25 5.35 No 48 0.24 No 0 0 No -24 0.54 No 42 31.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47667120 + NM_000251 MSH2 0 . . . 4.5 70.85 13 4.98 No 10 0.36 No 0 0 No -22 0.41 No 48 71.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68735269 + NM_133509 RAD51B 0 . . . 3.94 66.37 35 5.63 Yes 65 1.19 Yes 0 0 No -34 0.49 No 39 70.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190681667 + NM_000534 PMS1 0 . . . 6.3 81.56 31 5.98 Yes 7 1.09 Yes 0 0 No -30 0.91 Yes 41 60.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68465054 + NM_133509 RAD51B 0 . . . 2.18 67.11 13 5.88 Yes 0 0.07 No 0 0 No -28 0.34 No 40 81.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68355059 + NM_133509 RAD51B 0 . . . 0.25 64.42 13 2.88 No 24 -3.03 No 0 0 No -17 0.43 No 13 22.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90956101 - NM_002485 NBN 0 . . . 4.78 82.01 16 4.98 No 24 0.54 No 0 0 No -20 0.82 Yes 46 89.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89699898 + NM_000314 PTEN 0 . . . 4.91 71.89 36 7.18 Yes 11 -2.48 No 0 0 No -35 0.66 Yes 47 49.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68362889 + NM_133509 RAD51B 0 . . . 6.37 75.57 16 5.1 No 58 0.49 No 0 0 No -45 0.77 Yes 44 89.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59846191 - NM_032043 BRIP1 0 . . . 5.66 80.05 21 5.1 No 10 0.49 No 0 0 No -20 0.47 No 48 54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108103478 + NM_000051 ATM 0 . . . 1.89 75.18 25 5.2 No 34 0.56 No 0 0 No -24 0.83 Yes 24 32.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190655469 + NM_000534 PMS1 0 . . . 1.46 66.68 28 5.05 No 11 0.8 Yes 0 0 No -20 0.42 No 41 85.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190664832 + NM_000534 PMS1 0 . . . 5.93 82.8 30 7.21 Yes 11 1 Yes 0 0 No -29 0.86 Yes 42 69.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131948622 + NM_005732 RAD50 0 . . . 4.43 70.09 29 8.68 Yes 40 -2.36 No 0 0 No -24 0.42 No 44 56.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68853524 + NM_133509 RAD51B 0 . . . 6.87 75.16 11 4.58 No 75 1.12 Yes 0 0 No -58 0.54 No 48 87.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68701989 + NM_133509 RAD51B 0 . . . 2.94 71.91 23 6.31 Yes 66 -4.94 No 0 0 No -22 0.73 Yes 21 41.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68523519 + NM_133509 RAD51B 0 . . . 0.94 80.2 24 3.98 No 43 -3.4 No 0 0 No -17 0.45 No 51 30.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190704290 + NM_000534 PMS1 0 . . . 5.48 85.86 24 6.28 Yes 75 0.56 No 0 0 No -29 0.28 No 39 87.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68897192 + NM_133509 RAD51B 0 . . . 4.11 66.41 23 5.1 No 38 0.76 No 0 0 No -21 0.67 Yes 44 71.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75500940 - NM_001040108 MLH3 0 . . . 0.8 70.4 21 6.32 Yes 62 0.74 No 0 0 No -20 0.86 Yes 47 39.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94165859 - NM_005591 MRE11 0 . . . 1.4 0 21 4.47 No 20 1.19 Yes 0 0 No -30 0.59 No 38 84.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104180215 - NM_001100119 XRCC3 0 . . . 1.26 0 13 5.77 Yes 9 1.47 Yes 0 0 No -24 0.68 Yes 43 73.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29123721 - NM_001005735 CHEK2 0 . . . 1.33 0 19 4.81 No 56 0.96 Yes 0 0 No -18 0.32 No 39 57.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75494361 - NM_001040108 MLH3 0 . . . 3.91 82.06 25 5.38 No 67 1.62 Yes 0 0 No -22 0.84 Yes 15 89.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68365472 + NM_133509 RAD51B 0 . . . 4.18 80.87 17 6 Yes -2 0.46 No 0 0 No -16 0.63 No 53 49.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190692206 + NM_000534 PMS1 0 . . . 3.77 75.8 23 4.75 No 37 0.41 No 0 0 No -22 0.59 No 40 87.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190690247 + NM_000534 PMS1 0 . . . 5.16 70 27 5.72 Yes 69 0.87 Yes 0 0 No -26 0.62 No 46 63.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90997061 - NM_002485 NBN 0 . . . 7.98 82.35 37 6.55 Yes 69 0.37 No 0 0 No -36 0.69 Yes 39 72.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68928905 + NM_133509 RAD51B 0 . . . 0.96 78.98 17 5.57 Yes 34 -4.51 No 0 0 No -24 0.68 Yes 39 80.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68556775 + NM_133509 RAD51B 0 . . . 7.91 91.15 36 5.67 Yes 12 0.09 No 0 0 No -35 0.94 Yes 46 81.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68989610 + NM_133509 RAD51B 0 . . . 6.59 86.09 20 6.72 Yes 27 -1.98 No 0 0 No -20 0.5 No 48 68.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41236841 - NM_007294 BRCA1 0 . . . 9.87 95.19 23 5 No 67 -4.96 No 0 0 No -46 0.51 No 45 83.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1223400 + NM_000455 STK11 0 . . . 2.64 80.63 21 5.2 No 35 -2.35 No 0 0 No -20 0.68 Yes 50 42.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47712588 + NM_000251 MSH2 0 . . . 1.09 75.74 20 5.57 Yes 74 -4.49 No 0 0 No -19 0.63 No 48 60.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69141109 + NM_133509 RAD51B 0 . . . 0.12 76.47 19 4.49 No 64 -2.28 No 0 0 No -18 0.3 No 29 55.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68434369 + NM_133509 RAD51B 0 . . . 0.79 67.59 22 3.96 No 9 0.91 Yes 0 0 No -21 0.83 Yes 49 84.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47806322 + NM_000251 MSH2 0 . . . 0.07 0 30 5.44 No 8 0.64 No 0 0 No -29 0.68 Yes 34 69.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47721604 + NM_000251 MSH2 0 . . . 1.29 72.92 37 7.39 Yes 0 1.45 Yes 0 0 No -36 0.5 No 52 54.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108121260 + NM_000051 ATM 0 . . . 7.25 77.6 23 4.99 No 9 1.1 Yes 0 0 No -23 0.56 No 49 67.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68711291 + NM_133509 RAD51B 0 . . . 1.37 73.19 33 5.83 Yes 51 0.89 Yes 0 0 No -33 0.54 No 52 45.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32922175 + NM_000059 BRCA2 0 . . . 3.59 81.84 16 4.69 No -2 0.39 No 0 0 No -44 0.22 No 46 93.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75488488 - NM_001040108 MLH3 0 . . . 1.35 0 27 6.49 Yes 55 0.58 No 0 0 No -26 0.29 No 50 50.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190665192 + NM_000534 PMS1 0 . . . 1.65 75.56 26 6.91 Yes 5 0.68 No 0 0 No -25 0.72 Yes 53 61.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1228072 + NM_000455 STK11 0 . . . 9.46 85.05 36 5.99 Yes NA NA NA 0 0 No -25 0.52 No 42 94.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75496285 - NM_001040108 MLH3 0 . . . 2.47 81.28 23 3.52 No 67 -4.96 No 0 0 No -19 0.56 No 43 37.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68803377 + NM_133509 RAD51B 0 . . . 0.4 56.98 22 7.35 Yes 26 -2 No 0 0 No -21 0.89 Yes 53 30.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137098 + NM_133509 RAD51B 0 . . . 8.03 79.08 21 4.79 No 50 -2.24 No 0 0 No -20 0.92 Yes 42 64.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47659275 + NM_000251 MSH2 0 . . . 0.17 74.68 32 5.44 No 64 1.03 Yes 0 0 No -31 0.87 Yes 36 41.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6038594 - NM_000535 PMS2 0 . . . 1.17 77.9 17 5.8 Yes 32 0.7 No 0 0 No -34 0.42 No 19 91.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68529452 + NM_133509 RAD51B 0 . . . 1.2 72.24 16 5.15 No 62 -5.15 No 0 0 No -20 0.71 Yes 49 38.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59845457 - NM_032043 BRIP1 0 . . . 1.53 71.75 22 5.63 Yes 5 0.18 No 0 0 No -21 0.49 No 45 47.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89640907 + NM_000314 PTEN 0 . . . 9.71 86.68 15 3.01 No 34 0.43 No 0 0 No -25 0.47 No 50 47.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89694450 + NM_000314 PTEN 0 . . . 0.05 74.09 19 5.23 No 4 0.41 No 0 0 No -47 0.48 No 54 77.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7592428 - NM_000546 TP53 0 . . . 7.91 86.19 14 3.65 No 5 1.25 Yes 0 0 No -24 0.68 Yes 53 81.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131897912 + NM_005732 RAD50 0 . . . 5.83 82.01 41 4.53 No 46 -3.47 No 0 0 No -30 0.68 Yes 54 55.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29123654 - NM_001005735 CHEK2 0 . . . 5 64.03 31 6.59 Yes 35 0.84 Yes 0 0 No -28 0.4 No 35 59.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68731889 + NM_133509 RAD51B 0 . . . 0.5 69.76 24 6.6 Yes 67 0.59 No 0 0 No -24 0.37 No 52 63.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59912802 - NM_032043 BRIP1 0 . . . 5.25 86.53 47 8.4 Yes 6 0.79 Yes 0 0 No -24 0.81 Yes 52 64.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68376583 + NM_133509 RAD51B 0 . . . 1.81 76.64 23 5.84 Yes 39 1.69 Yes 0 0 No -22 0.84 Yes 43 64.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104179656 - NM_001100119 XRCC3 0 . . . 2.05 71.17 14 5.47 No 76 0.81 Yes 0 0 No -23 0.43 No 51 32.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56792532 + NM_058216 RAD51C 0 . . . 5.2 79.23 16 5.07 No 65 0.64 No 0 0 No -21 0.58 No 43 40.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6036421 - NM_000535 PMS2 0 . . . 3.81 89.14 14 4.43 No 65 -2.43 No 0 0 No -43 0.8 Yes 44 85.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131974265 + NM_005732 RAD50 0 . . . 5.87 85.07 26 5.47 No 35 0.48 No 0 0 No -29 0.42 No 41 43.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152360325 - NM_005431 XRCC2 0 . . . 3.59 69.32 16 4.69 No 22 1.46 Yes 0 0 No -50 0.8 Yes 36 90.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41275970 - NM_007294 BRCA1 0 . . . 1.96 61.23 9 4.8 No 12 0.12 No 0 0 No -29 0.74 Yes 30 86.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89639828 + NM_000314 PTEN 0 . . . 8.93 91.63 25 5.39 No 53 0.58 No 27 0.88 Yes -22 0.74 Yes 43 94.07 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 59901442 - NM_032043 BRIP1 0 . . . 0.32 74.68 17 5.29 No 71 0.32 No 0 0 No -21 0.69 Yes 54 78.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131908509 + NM_005732 RAD50 0 . . . 5.7 80.92 31 5.33 No -1 1.54 Yes 0 0 No -23 0.77 Yes 48 84.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90969584 - NM_002485 NBN 0 . . . 2.97 74.68 21 4.16 No 62 -4.39 No 0 0 No -20 0.61 No 32 49.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6027681 - NM_000535 PMS2 0 . . . 2.3 84.41 19 4.8 No 64 0.38 No 0 0 No -25 0.32 No 29 90.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68783711 + NM_133509 RAD51B 0 . . . 2 65.42 29 6.8 Yes 28 -3.45 No 0 0 No -28 0.59 No 49 61.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47691237 + NM_000251 MSH2 0 . . . 1.91 74.55 14 4.47 No 70 1.06 Yes 0 0 No -22 0.5 No 44 71.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48022288 + NM_000179 MSH6 0 . . . 3.74 74.92 10 4.79 No 21 0.74 No 0 0 No -21 0.46 No 37 89.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59880142 - NM_032043 BRIP1 0 . . . 3.17 67.71 20 5 No 47 -4.32 No 0 0 No -19 0.5 No 41 70.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29081968 - NM_001005735 CHEK2 0 . . . 2.24 80.12 23 6.47 Yes 7 1.02 Yes 0 0 No -22 0.73 Yes 51 80.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68536593 + NM_133509 RAD51B 0 . . . 4.91 78.92 28 6.37 Yes 20 0.38 No 0 0 No -27 0.51 No 27 23.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68412372 + NM_133509 RAD51B 0 . . . 2.24 80.12 15 3.6 No 7 1.02 Yes 0 0 No -46 0.78 Yes 51 84.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47785276 + NM_000251 MSH2 0 . . . 4.41 71.84 22 5.49 No 3 0.53 No 0 0 No -21 0.67 Yes 43 75.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69147859 + NM_133509 RAD51B 0 . . . 1.56 82.17 17 4.8 No 0 1.18 Yes 0 0 No -21 0.5 No 52 65.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68323575 + NM_133509 RAD51B 0 . . . 9.99 85.86 24 7.28 Yes 5 2.07 Yes 0 0 No -23 0.82 Yes 46 88.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1210441 + NM_000455 STK11 0 . . . 0.06 65.13 20 4.79 No 54 0.51 No 0 0 No -19 0.4 No 46 53.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47771788 + NM_000251 MSH2 0 . . . 3.95 75.93 19 5.01 No 20 0.81 Yes 0 0 No -27 0.43 No 38 59.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89652704 + NM_000314 PTEN 0 . . . 4.15 79.69 13 5.34 No 44 0.75 No 0 0 No -21 0.56 No 51 48.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68697526 + NM_133509 RAD51B 0 . . . 1.07 56.02 41 7.29 Yes 35 0.33 No 0 0 No -32 0.52 No 23 63.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68368880 + NM_133509 RAD51B 0 . . . 5.17 77.56 29 5.91 Yes 11 0.8 Yes 0 0 No -28 0.81 Yes 47 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47749393 + NM_000251 MSH2 0 . . . 3.68 0 17 5.05 No 30 0.34 No 0 0 No -24 0.49 No 44 31.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68604768 + NM_133509 RAD51B 0 . . . 4.91 84.78 25 5.25 No 8 0.28 No 0 0 No -24 0.84 Yes 45 86.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190666094 + NM_000534 PMS1 0 . . . 3.35 73.49 24 5.02 No 59 0.3 No 0 0 No -23 0.77 Yes 37 62.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21981546 - NM_000077 CDKN2A 0 . . . 4.88 80.11 37 4.84 No 21 1.19 Yes 0 0 No -27 0.39 No 45 67.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131916910 + NM_005732 RAD50 0 . . . 2.48 75.22 39 7.35 Yes 32 1.13 Yes 0 0 No -23 0.85 Yes 26 44.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37081243 + NM_000249 MLH1 0 . . . 3.08 66.2 28 5.83 Yes 59 -1.71 No 0 0 No -27 0.94 Yes 42 83.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68917337 + NM_133509 RAD51B 0 . . . 4.4 77.53 16 5.29 No 62 1.39 Yes 0 0 No -25 0.47 No 47 86.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37043192 + NM_000249 MLH1 0 . . . 3.9 75.74 27 5.2 No 5 0.33 No 0 0 No -26 0.7 Yes 36 80.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7572436 - NM_000546 TP53 0 . . . 2.94 62.04 36 5.49 No 16 0.51 No 0 0 No -25 0.66 No 42 48.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68685993 + NM_133509 RAD51B 0 . . . 2.64 71.05 19 6.08 Yes -3 0.51 No 0 0 No -18 0.8 Yes 46 50.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190689911 + NM_000534 PMS1 0 . . . 4.33 78.67 9 4.61 No 1 1.21 Yes 0 0 No -9 0.41 No 48 82.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69088200 + NM_133509 RAD51B 0 . . . 4.54 72.86 28 5.22 No 66 0.81 Yes 0 0 No -27 0.86 Yes 43 52.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47705688 + NM_000251 MSH2 0 . . . 1.24 78.7 17 4.58 No 43 0.78 Yes 0 0 No -42 0.76 Yes 49 86.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47656509 + NM_000251 MSH2 0 . . . 6 90.92 28 5.29 No 43 0.55 No 0 0 No -27 0.63 No 15 74.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68795820 + NM_133509 RAD51B 0 . . . 4.42 80.4 39 5.5 No 3 0.98 Yes 0 0 No -33 0.51 No 47 71.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68413014 + NM_133509 RAD51B 0 . . . 1.56 53.86 14 5.48 No 63 0.1 No 0 0 No -54 0.59 No 47 35.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84406459 - NM_139076 FAM175A 0 . . . 1.25 69.62 21 5.65 Yes 57 -3.52 No 0 0 No -20 0.7 Yes 52 37.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23615501 - NM_024675 PALB2 0 . . . 1.95 64.4 23 5.38 No 65 -1.21 No 0 0 No -27 0.69 Yes 22 72.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47707065 + NM_000251 MSH2 0 . . . 0.12 55 23 5.2 No 64 -5.89 No 0 0 No -25 0.39 No 45 33.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69006239 + NM_133509 RAD51B 0 . . . 1.12 63.1 16 4.73 No 34 0.01 No 0 0 No -20 0.58 No 53 20.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47762101 + NM_000251 MSH2 0 . . . 3.46 69.77 19 6.63 Yes 43 0.03 No 0 0 No -20 0.29 No 49 52.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56785489 + NM_058216 RAD51C 0 . . . 5.13 72.78 70 6.22 Yes 70 -5.54 No 0 0 No -48 0.61 No 49 57.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190744207 + NM_000534 PMS1 0 . . . 0.59 70.28 31 5.99 Yes 34 -1.27 No 0 0 No -30 0.93 Yes 52 47.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90998622 - NM_002485 NBN 0 . . . 1.74 66.35 22 5.84 Yes 48 0.51 No 0 0 No -21 0.79 Yes 33 58.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37091891 + NM_000249 MLH1 0 . . . 0.08 0 40 6.8 Yes 64 -4.76 No 0 0 No -24 0.66 Yes 53 83.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32932455 + NM_000059 BRCA2 0 . . . 1.42 69.46 19 4.24 No 41 -2.78 No 0 0 No -39 0.49 No 41 36.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94223587 - NM_005591 MRE11 0 . . . 1.03 0 24 4.66 No 7 0.94 Yes 0 0 No -23 0.71 Yes 47 65.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215673399 - NM_000465 BARD1 0 . . . 2.14 0 18 4.9 No 60 0.5 No 0 0 No -57 0.79 Yes 28 79.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56806168 + NM_058216 RAD51C 0 . . . 8.31 83.22 17 5.57 Yes 9 1.69 Yes 0 0 No -16 0.6 No 49 73.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68837552 + NM_004360 CDH1 0 . . . 0.67 80.37 34 5.92 Yes 13 1.5 Yes 0 0 No -28 0.67 Yes 45 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47760331 + NM_000251 MSH2 0 . . . 3.6 85.02 36 6.08 Yes 4 1.2 Yes 0 0 No -35 0.85 Yes 45 71.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59888138 - NM_032043 BRIP1 0 . . . 1.36 58.45 21 3.8 No 8 0.92 Yes 0 0 No -19 0.84 Yes 44 72.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33438482 - NM_002878 RAD51D 0 . . . 1.96 71.16 25 7.35 Yes 35 0.97 Yes 0 0 No -24 0.53 No 49 84.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68569138 + NM_133509 RAD51B 0 . . . 3.73 73.85 33 4.37 No 49 0.43 No 0 0 No -26 0.75 Yes 48 54.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108178214 + NM_000051 ATM 0 . . . 1.2 0 20 4.33 No 10 0.28 No 0 0 No -20 0.77 Yes 36 64.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48031877 + NM_000179 MSH6 0 . . . 8.07 78.96 29 6.32 Yes 34 1.64 Yes 0 0 No -28 0.89 Yes 43 66.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47679135 + NM_000251 MSH2 0 . . . 3.44 77.29 43 8.13 Yes 66 0.7 No 0 0 No -42 0.62 No 46 67.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68547651 + NM_133509 RAD51B 0 . . . 0.07 70.67 27 5.74 Yes 22 0.75 No 0 0 No -26 0.78 Yes 49 92.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68357608 + NM_133509 RAD51B 0 . . . 5.34 74.99 34 5.69 Yes 26 1.19 Yes 0 0 No -27 0.87 Yes 40 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68291766 + NM_133509 RAD51B 0 . . . 2.1 76.63 36 6.48 Yes 67 -4.95 No 0 0 No -35 0.37 No 43 56.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68822965 + NM_133509 RAD51B 0 . . . 3.48 80.61 35 5.73 Yes 59 -3.71 No 0 0 No -25 0.69 Yes 51 49.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69023364 + NM_133509 RAD51B 0 . . . 2.36 73.61 22 4.26 No 70 0.18 No 0 0 No -32 0.73 Yes 51 70.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190692768 + NM_000534 PMS1 0 . . . 4.42 84.22 32 5.74 Yes 8 1.13 Yes 0 0 No -28 0.37 No 50 90.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105185360 + NM_021930 RINT1 0 . . . 0.51 78.26 53 6.53 Yes 48 1.13 Yes 0 0 No -23 0.33 No 35 53.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48009305 + NM_000179 MSH6 0 . . . 2.41 84.22 28 6.4 Yes 33 0.87 Yes 0 0 No -27 0.84 Yes 50 81.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68363236 + NM_133509 RAD51B 0 . . . 1.45 73.2 20 4.79 No 4 1.43 Yes 0 0 No -23 0.71 Yes 48 70.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7587498 - NM_000546 TP53 0 . . . 0.37 68.93 20 4.11 No 60 1.58 Yes 0 0 No -19 0.48 No 20 79.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68797324 + NM_004360 CDH1 0 . . . 4.18 78.99 18 7.5 Yes 8 0.23 No 0 0 No -28 0.64 No 43 85.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215613583 - NM_000465 BARD1 0 . . . 1.32 67.21 26 5.17 No -1 0.24 No 0 0 No -20 0.32 No 41 29.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89682785 + NM_000314 PTEN 0 . . . 6.1 84.95 16 4.69 No 75 0.57 No 0 0 No -46 0.62 No 41 50.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41016067 + NM_001164269 RAD51 0 . . . 0.01 62.52 38 6.05 Yes 8 0.31 No 0 0 No -21 0.4 No 49 46.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29124009 - NM_001005735 CHEK2 0 . . . 2.74 70.85 31 5.47 No 13 0.94 Yes 0 0 No -23 0.66 No 40 80.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68302656 + NM_133509 RAD51B 0 . . . 4.96 74.18 56 6.09 Yes 72 -3.78 No 0 0 No -41 0.55 No 44 42.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215613881 - NM_000465 BARD1 0 . . . 1.68 73.59 21 5.1 No 59 0.2 No 0 0 No -20 0.81 Yes 26 78.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32920449 + NM_000059 BRCA2 0 . . . 3.76 77.26 19 4.94 No 60 0.75 No 0 0 No -18 0.6 No 49 71.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68536173 + NM_133509 RAD51B 0 . . . 4.37 71.34 32 6 Yes 18 1.75 Yes 0 0 No -31 0.9 Yes 40 88.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89681287 + NM_000314 PTEN 0 . . . 7.66 84.9 20 4.48 No 21 1.32 Yes 0 0 No -27 0.72 Yes 47 74.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59812321 - NM_032043 BRIP1 0 . . . 7.63 81.75 21 4.69 No 38 0.31 No 0 0 No -20 0.91 Yes 37 47.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131966426 + NM_005732 RAD50 0 . . . 4.25 83.08 21 5.05 No 73 -3.98 No 0 0 No -20 0.7 Yes 51 60.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59807047 - NM_032043 BRIP1 0 . . . 0.94 69.06 19 5 No 22 0.94 Yes 0 0 No -18 0.24 No 33 64.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68577239 + NM_133509 RAD51B 0 . . . 0.93 65.04 25 5 No 26 0.95 Yes 0 0 No -54 0.88 Yes 32 96.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190740392 + NM_000534 PMS1 0 . . . 2.34 65.08 18 4.58 No 36 0.37 No 0 0 No -44 0.77 Yes 53 74.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59877145 - NM_032043 BRIP1 0 . . . 1.02 66.38 34 6.54 Yes 14 -2.92 No 0 0 No -34 0.5 No 45 41.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47765796 + NM_000251 MSH2 0 . . . 1.11 74.09 58 7.73 Yes 53 0.63 No 0 0 No -57 0.37 No 36 49.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52444092 - NM_004656 BAP1 0 . . . 7.65 84.32 22 4.37 No NA NA NA 0 0 No -22 0.48 No 41 65.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47722823 + NM_000251 MSH2 0 . . . 2.29 79.81 21 4.59 No 19 0.11 No 0 0 No -31 0.84 Yes 48 88.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59776931 - NM_032043 BRIP1 0 . . . 0.69 63.14 19 4.77 No 50 0.87 Yes 0 0 No -45 0.79 Yes 35 33.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69019840 + NM_133509 RAD51B 0 . . . 4.69 80.23 19 4.9 No 7 1.37 Yes 0 0 No -22 0.62 No 51 69.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69089699 + NM_133509 RAD51B 0 . . . 0.82 69.89 28 7.08 Yes -1 0.26 No 0 0 No -28 0.33 No 52 83.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215646155 - NM_000465 BARD1 0 . . . 2.22 55.87 31 5.06 No 32 -3.55 No 0 0 No -30 0.32 No 52 56.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108096974 + NM_000051 ATM 0 . . . 5.08 83.48 50 6.99 Yes 2 0.83 Yes 0 0 No -35 0.43 No 38 63.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108152666 + NM_000051 ATM 0 . . . 4.31 72.33 35 6.4 Yes 62 -3 No 0 0 No -34 0.77 Yes 26 53.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68534632 + NM_133509 RAD51B 0 . . . 4 0 16 5.29 No 70 -4.64 No 0 0 No -15 0.28 No 51 75.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190678847 + NM_000534 PMS1 0 . . . 3.14 67.02 11 3.86 No 45 1.2 Yes 0 0 No -24 0.41 No 43 73.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59925496 - NM_032043 BRIP1 0 . . . 2.56 80.48 29 4.2 No 69 0.63 No 0 0 No -23 0.86 Yes 51 87.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69016039 + NM_133509 RAD51B 0 . . . 2.63 79.26 12 4.59 No 22 1.08 Yes 0 0 No -41 0.78 Yes 47 77.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108169070 + NM_000051 ATM 0 . . . 6.59 85.67 15 5.52 No 34 1.18 Yes 0 0 No -28 0.37 No 49 59.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190716323 + NM_000534 PMS1 0 . . . 1.35 0 13 5 No 22 1.34 Yes 0 0 No -20 0.82 Yes 40 77.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56789791 + NM_058216 RAD51C 0 . . . 0.73 56.82 25 4.99 No 74 -2.25 No 0 0 No -24 0.86 Yes 53 50.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33432876 - NM_002878 RAD51D 0 . . . 8.96 89.47 29 5.29 No 59 0.6 No 0 0 No -32 0.34 No 36 65.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68874353 + NM_133509 RAD51B 0 . . . 4.55 76.9 16 5.05 No 66 -5.26 No 0 0 No -20 0.74 Yes 50 61.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75504065 - NM_001040108 MLH3 0 . . . 0.32 0 26 4.97 No 48 -3.11 No 0 0 No -22 0.68 Yes 44 64.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68388812 + NM_133509 RAD51B 0 . . . 11.12 90.26 31 5.95 Yes 60 0.1 No 0 0 No -30 0.79 Yes 52 67.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152351204 - NM_005431 XRCC2 0 . . . 7.61 88.68 15 5.84 Yes 10 1.15 Yes 0 0 No -30 0.51 No 48 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68517173 + NM_133509 RAD51B 0 . . . 9.27 85.17 29 4.2 No 46 0.2 No 0 0 No -28 0.56 No 43 63.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68478433 + NM_133509 RAD51B 0 . . . 4.37 76.24 40 6.62 Yes 11 1.41 Yes 0 0 No -23 0.69 Yes 47 58.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68808485 + NM_133509 RAD51B 0 . . . 2.43 72.11 36 5.62 Yes 48 0.08 No 0 0 No -35 0.58 No 45 53.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68976275 + NM_133509 RAD51B 0 . . . 0.47 77.87 31 6.18 Yes 57 0.44 No 0 0 No -26 0.59 No 50 50.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152361002 - NM_005431 XRCC2 0 . . . 0.74 63.36 16 4.46 No 38 1.94 Yes 0 0 No -42 0.54 No 52 43.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68624388 + NM_133509 RAD51B 0 . . . 1.48 77.38 28 4.32 No 15 1.13 Yes 0 0 No -23 0.92 Yes 37 59.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68679947 + NM_133509 RAD51B 0 . . . 4.07 83.26 20 7.14 Yes 7 0.14 No 0 0 No -19 0.63 No 47 66.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68363233 + NM_133509 RAD51B 0 . . . 4.48 75.04 18 5.78 Yes 1 1.41 Yes 0 0 No -17 0.7 Yes 51 59.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32912848 + NM_000059 BRCA2 0 . . . 5.66 85.72 29 6.56 Yes 71 1.29 Yes 0 0 No -28 0.62 No 44 51.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69115041 + NM_133509 RAD51B 0 . . . 0.3 67.77 13 4.91 No 20 1.63 Yes 0 0 No -19 0.26 No 38 81.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32933684 + NM_000059 BRCA2 0 . . . 4.46 88.63 20 4.21 No 42 -2.95 No 0 0 No -19 0.63 No 46 62.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7587680 - NM_000546 TP53 0 . . . 0.93 78.51 22 6.16 Yes 2 1.28 Yes 0 0 No -21 0.81 Yes 16 72.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94209460 - NM_005591 MRE11 0 . . . 5.59 80.68 20 5.57 Yes 8 0.88 Yes 0 0 No -19 0.75 Yes 49 57.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59873013 - NM_032043 BRIP1 0 . . . 7.23 76.91 27 3.7 No 22 -2.85 No 0 0 No -26 0.55 No 49 80.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94199073 - NM_005591 MRE11 0 . . . 8.54 90.36 18 6.34 Yes 31 1.25 Yes 0 0 No -17 0.31 No 44 74.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152372990 - NM_005431 XRCC2 0 . . . 4.15 70.79 29 5.68 Yes NA NA NA 0 0 No -16 0.44 No 52 35.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68794050 + NM_133509 RAD51B 0 . . . 7.77 85.29 33 6.78 Yes 48 1.28 Yes 0 0 No -24 0.71 Yes 44 74.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68794270 + NM_004360 CDH1 0 . . . 5.85 77.99 21 3.41 No 12 1.75 Yes 0 0 No -20 0.88 Yes 46 65.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47782132 + NM_000251 MSH2 0 . . . 0.64 72.88 43 6.48 Yes 6 0.64 No 0 0 No -35 0.67 Yes 45 65.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68978139 + NM_133509 RAD51B 0 . . . 2.06 56.42 23 5.29 No 39 0.23 No 0 0 No -25 0.58 No 33 87.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215604921 - NM_000465 BARD1 0 . . . 5.27 78.7 39 6.99 Yes 62 0.77 Yes 0 0 No -31 0.83 Yes 42 67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69029835 + NM_133509 RAD51B 0 . . . 4.07 76.9 21 4.27 No 71 1.39 Yes 0 0 No -20 0.82 Yes 54 64.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89700278 + NM_000314 PTEN 0 . . . 0.38 63.89 16 4.78 No 27 -2.48 No 0 0 No -51 0.8 Yes 50 55.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47674165 + NM_000251 MSH2 0 . . . 0.14 0 21 4.49 No 67 0.81 Yes 0 0 No -20 0.95 Yes 53 42.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131906242 + NM_005732 RAD50 0 . . . 1.84 80.49 21 4.79 No 30 1.04 Yes 0 0 No -20 0.78 Yes 50 50.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69026485 + NM_133509 RAD51B 0 . . . 2.22 78.01 31 5.66 Yes 63 1.31 Yes 0 0 No -30 0.66 No 40 79.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1215235 + NM_000455 STK11 0 . . . 1.94 72.65 26 5.85 Yes 40 1.27 Yes 0 0 No -25 0.72 Yes 24 47.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108189654 + NM_000051 ATM 0 . . . 0.85 74.47 12 5.1 No 4 0.1 No 0 0 No -28 0.31 No 54 79.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108196252 + NM_000051 ATM 0 . . . 2.02 77.48 34 5.92 Yes 74 -1.26 No 0 0 No -33 0.85 Yes 51 37.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68307393 + NM_133509 RAD51B 0 . . . 1.95 58.22 25 4.46 No 43 0.62 No 0 0 No -24 0.49 No 19 49.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68700165 + NM_133509 RAD51B 0 . . . 9.95 81.21 22 4.07 No 55 1.26 Yes 0 0 No -25 0.63 No 42 96.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69076984 + NM_133509 RAD51B 0 . . . 3.78 70.97 19 4.8 No 25 0.71 No 0 0 No -16 0.42 No 33 94.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68540030 + NM_133509 RAD51B 0 . . . 3.57 76.13 29 6.37 Yes 28 1.1 Yes 0 0 No -29 0.37 No 30 66.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68954977 + NM_133509 RAD51B 0 . . . 2.32 70.05 15 4.33 No 74 0.68 No 0 0 No -46 0.53 No 47 53.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68380343 + NM_133509 RAD51B 0 . . . 1.55 71.72 18 4.9 No 6 1 Yes 0 0 No -17 0.5 No 48 75.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23637899 - NM_024675 PALB2 0 . . . 0.51 66.92 32 5.65 Yes 7 0.01 No 0 0 No -31 0.44 No 32 44.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90986309 - NM_002485 NBN 0 . . . 3.14 79.27 17 5.39 No 74 -3.7 No 0 0 No -16 0.65 No 36 75.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59898529 - NM_032043 BRIP1 0 . . . 0.02 62.7 20 5.95 Yes 59 1.41 Yes 0 0 No -26 0.64 No 32 72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105207370 + NM_021930 RINT1 0 . . . 3.35 77.1 20 7.14 Yes 66 -5.15 No 0 0 No -19 0.53 No 45 58.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68591025 + NM_133509 RAD51B 0 . . . 0.33 69.78 29 7.08 Yes 62 0.56 No 0 0 No -28 0.72 Yes 43 66.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68805425 + NM_133509 RAD51B 0 . . . 4.79 83.14 15 4.58 No 68 0.22 No 0 0 No -20 0.61 No 44 56.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190662121 + NM_000534 PMS1 0 . . . 1.92 64.38 38 6.08 Yes 71 -1.04 No 0 0 No -30 0.44 No 31 57.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59830076 - NM_032043 BRIP1 0 . . . 1.85 72.48 20 5.63 Yes 62 1.02 Yes 0 0 No -19 0.79 Yes 44 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47806208 + NM_000251 MSH2 0 . . . 10.27 81.11 15 5.2 No 25 0.48 No 0 0 No -24 0.65 No 32 91.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68504056 + NM_133509 RAD51B 0 . . . 1.21 86.33 21 5.2 No 33 1.52 Yes 0 0 No -20 0.6 No 50 44.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29103055 - NM_001005735 CHEK2 0 . . . 6 72.82 33 5.51 No 18 1.23 Yes 0 0 No -32 0.63 No 40 83.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89652804 + NM_000314 PTEN 0 . . . 5.65 80.06 17 6.78 Yes 71 -3.91 No 0 0 No -16 0.34 No 48 23.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215637649 - NM_000465 BARD1 0 . . . 3.06 79.63 42 7.61 Yes -1 0.11 No 0 0 No -27 0.84 Yes 45 67.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69117909 + NM_133509 RAD51B 0 . . . 0.08 83.78 27 5.2 No 12 1.07 Yes 0 0 No -26 0.27 No 39 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41020880 + NM_001164269 RAD51 0 . . . 4.98 0 33 6 Yes 2 0.8 Yes 24 0.76 Yes -32 0.79 Yes 47 96.52 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68620738 + NM_133509 RAD51B 0 . . . 1.01 64.51 28 5.2 No 16 0.9 Yes 0 0 No -27 0.55 No 42 79.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89732219 + NM_000314 PTEN 0 . . . 3.25 90.02 17 4.47 No 15 0.65 No 0 0 No -16 0.54 No 43 91.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68454482 + NM_133509 RAD51B 0 . . . 1.17 0 27 6.08 Yes 16 1.41 Yes 0 0 No -26 0.63 No 33 28.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131970730 + NM_005732 RAD50 0 . . . 0.02 0 16 5.16 No 32 0.86 Yes 0 0 No -25 0.7 Yes 26 71.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6031641 - NM_000535 PMS2 0 . . . 0.24 65.2 15 4.34 No 70 0.26 No 0 0 No -23 0.58 No 37 41.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6029685 - NM_000535 PMS2 0 . . . 0.94 76.63 17 4.8 No 59 -3.94 No 0 0 No -34 0.74 Yes 48 76.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47664249 + NM_000251 MSH2 0 . . . 2.35 70.76 31 6.02 Yes 37 0.81 Yes 0 0 No -30 0.88 Yes 21 35.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48024207 + NM_000179 MSH6 0 . . . 0.32 66.86 19 5.48 No 61 -5.54 No 0 0 No -18 0.64 No 20 42.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59897329 - NM_032043 BRIP1 0 . . . 2.77 84.96 22 5.74 Yes 56 0.32 No 0 0 No -21 0.83 Yes 51 68.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29138923 - NM_001005735 CHEK2 0 . . . 9.09 88.1 30 5.25 No 66 0.88 Yes 0 0 No -25 0.63 No 39 44.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108204397 + NM_000051 ATM 0 . . . 2.59 86.45 21 5.1 No 49 0.19 No 0 0 No -20 0.71 Yes 39 33.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47674435 + NM_000251 MSH2 0 . . . 1.08 84.22 22 7.07 Yes 33 1.76 Yes 0 0 No -22 0.73 Yes 25 46.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68798813 + NM_133509 RAD51B 0 . . . 3.58 54.76 25 5.28 No 2 -2.35 No 0 0 No -25 0.56 No 50 76.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90949107 - NM_002485 NBN 0 . . . 2.56 81.16 33 4.24 No 16 1.36 Yes 0 0 No -32 0.86 Yes 42 96.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23624469 - NM_024675 PALB2 0 . . . 2.97 70.31 54 7.73 Yes 54 -4.95 No 0 0 No -33 0.67 Yes 46 31.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108138986 + NM_000051 ATM 0 . . . 0.17 71 18 4.9 No 67 0.79 Yes 0 0 No -24 0.69 Yes 39 75.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32919097 + NM_000059 BRCA2 0 . . . 3.73 65.18 19 5 No 59 -5.79 No 0 0 No -40 0.47 No 44 89.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68618746 + NM_133509 RAD51B 0 . . . 6.15 80.12 30 4.61 No 8 1.24 Yes 0 0 No -29 0.66 No 50 90.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59895237 - NM_032043 BRIP1 0 . . . 3.27 76.67 10 4 No 18 0.64 No 0 0 No -29 0.66 Yes 52 87.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6033491 - NM_000535 PMS2 0 . . . 2.3 84.41 21 5.2 No 38 1.3 Yes 0 0 No -25 0.55 No 36 74.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59828966 - NM_032043 BRIP1 0 . . . 4.5 69.97 18 7 Yes 38 0.17 No 0 0 No -26 0.47 No 34 53.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29104761 - NM_001005735 CHEK2 0 . . . 1.11 72.33 36 7.81 Yes 30 1.18 Yes 0 0 No -28 0.43 No 28 68.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190647958 + NM_000534 PMS1 0 . . . 5.1 71.7 37 6.16 Yes 54 0.84 Yes 0 0 No -32 0.24 No 44 70.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69097106 + NM_133509 RAD51B 0 . . . 2.74 0 43 6.21 Yes 49 0.91 Yes 0 0 No -29 0.73 Yes 35 73.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47693552 + NM_000251 MSH2 0 . . . 2.01 73.68 22 6.32 Yes 71 0.88 Yes 0 0 No -21 0.8 Yes 48 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108093188 + NM_000051 ATM 0 . . . 1.64 0 24 5.29 No 11 0.44 No 0 0 No -23 0.88 Yes 47 73.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68404994 + NM_133509 RAD51B 0 . . . 4.06 88.38 28 4.54 No 17 1.14 Yes 0 0 No -28 0.6 No 35 53.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108095635 + NM_000051 ATM 0 . . . 2.65 76.96 56 7.17 Yes 55 0.87 Yes 0 0 No -44 0.5 No 44 72.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69054921 + NM_133509 RAD51B 0 . . . 0.03 0 24 3.55 No 49 1.39 Yes 0 0 No -23 0.4 No 43 54.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59822144 - NM_032043 BRIP1 0 . . . 0.47 0 55 6.34 Yes 8 0.25 No 0 0 No -30 0.5 No 50 90.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6020764 - NM_000535 PMS2 0 . . . 2.71 73.38 30 5.38 No 2 1.73 Yes 0 0 No -29 0.51 No 50 25.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32941214 + NM_000059 BRCA2 0 . . . 2.03 72.32 49 6.98 Yes 72 -5.5 No 0 0 No -31 0.9 Yes 54 37.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94162779 - NM_005591 MRE11 0 . . . 2.67 68.41 21 4.69 No 52 1.13 Yes 0 0 No -21 0.72 Yes 28 68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131978878 + NM_005732 RAD50 0 . . . 3.44 73.44 27 5.2 No 53 1.64 Yes 0 0 No -26 0.84 Yes 44 94.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108160908 + NM_000051 ATM 0 . . . 5.05 73.4 26 5.4 No 65 0.24 No 0 0 No -25 0.44 No 44 56.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68742572 + NM_133509 RAD51B 0 . . . 5.18 80.06 22 5.29 No 61 0.19 No 0 0 No -21 0.68 Yes 46 47.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215619598 - NM_000465 BARD1 0 . . . 3.19 70.49 24 6.9 Yes 56 0.56 No 0 0 No -30 0.74 Yes 53 68.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89659118 + NM_000314 PTEN 0 . . . 3.91 70.74 30 6.5 Yes 15 -1.53 No 0 0 No -29 0.55 No 43 77.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69121170 + NM_133509 RAD51B 0 . . . 7.8 77.69 21 5 No 60 1.44 Yes 0 0 No -18 0.54 No 47 68.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69008669 + NM_133509 RAD51B 0 . . . 1.25 70.04 31 6.34 Yes 73 1.02 Yes 0 0 No -26 0.54 No 42 70.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89679684 + NM_000314 PTEN 0 . . . 0.46 63.82 41 4.86 No 52 0.63 No 0 0 No -30 0.45 No 46 63.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68694187 + NM_133509 RAD51B 0 . . . 3.97 76.24 23 4.64 No 1 1.18 Yes 0 0 No -19 0.5 No 51 54.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56784955 + NM_058216 RAD51C 0 . . . 3.85 69.57 18 4.9 No 27 1.12 Yes 0 0 No -19 0.3 No 45 87.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89663907 + NM_000314 PTEN 0 . . . 1.62 75.1 24 5.93 Yes 71 1.12 Yes 0 0 No -24 0.44 No 54 28.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68438585 + NM_133509 RAD51B 0 . . . 4.37 73.74 38 5.79 Yes 29 0.6 No 0 0 No -29 0.76 Yes 43 54.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215590621 - NM_000465 BARD1 0 . . . 3.42 74.17 17 7.02 Yes 63 0.79 Yes 0 0 No -22 0.38 No 42 63.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59841915 - NM_032043 BRIP1 0 . . . 8.83 85.79 35 6.06 Yes 9 0.58 No 0 0 No -34 0.48 No 40 63.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68810048 + NM_133509 RAD51B 0 . . . 6.61 87.42 53 7.92 Yes 14 0.43 No 0 0 No -25 0.6 No 44 96.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105195806 + NM_021930 RINT1 0 . . . 2.63 64.98 16 4.31 No 64 0.86 Yes 0 0 No -23 0.59 No 61 33.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68465693 + NM_133509 RAD51B 0 . . . 2.1 74.87 15 5.72 Yes 34 1.18 Yes 0 0 No -21 0.5 No 37 76.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215619449 - NM_000465 BARD1 0 . . . 1.48 70.76 20 7.93 Yes 26 0.13 No 0 0 No -19 0.51 No 43 43.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68588893 + NM_133509 RAD51B 0 . . . 1.77 72.28 16 6.48 Yes 16 0.34 No 0 0 No -28 0.5 No 51 62.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68899626 + NM_133509 RAD51B 0 . . . 9.34 78.54 18 4.89 No 74 0.74 No 0 0 No -49 0.59 No 48 73.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68675279 + NM_133509 RAD51B 0 . . . 2.16 69.15 38 5.27 No 42 1.14 Yes 0 0 No -28 0.77 Yes 47 39.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131933927 + NM_005732 RAD50 0 . . . 4.02 80.12 23 6.3 Yes 10 1.27 Yes 0 0 No -22 0.92 Yes 48 90.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59942381 - NM_032043 BRIP1 0 . . . 0.01 0 28 5.83 Yes 20 1.2 Yes 0 0 No -27 0.72 Yes 38 86.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94208426 - NM_005591 MRE11 0 . . . 2.86 69.39 10 5.39 No 71 0.58 No 0 0 No -26 0.76 Yes 48 44.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23613834 - NM_024675 PALB2 0 . . . 0.17 0 24 5.72 Yes 71 1.25 Yes 0 0 No -23 0.93 Yes 13 11.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56799658 + NM_058216 RAD51C 0 . . . 5.23 82.04 14 6.31 Yes 12 1.85 Yes 0 0 No -45 0.66 No 46 61.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68988362 + NM_133509 RAD51B 0 . . . 5.67 89.4 14 5.55 No 60 -4.78 No 0 0 No -24 0.66 No 49 74.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131921842 + NM_005732 RAD50 0 . . . 5.84 84.3 28 4.24 No 37 0.77 No 0 0 No -27 0.46 No 44 89.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68456816 + NM_133509 RAD51B 0 . . . 4.77 73.7 22 5.29 No 16 1.2 Yes 0 0 No -21 0.81 Yes 42 93.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89695246 + NM_000314 PTEN 0 . . . 0.85 62.51 17 5.92 Yes 51 1.01 Yes 0 0 No -31 0.56 No 45 47.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1226996 + NM_000455 STK11 0 . . . 9.67 82.56 21 5.2 No 70 1.01 Yes 0 0 No -20 0.92 Yes 51 77.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41212837 - NM_007294 BRCA1 0 . . . 4.89 82.57 12 4.95 No 73 0.37 No 0 0 No -25 0.58 No 48 75.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59834829 - NM_032043 BRIP1 0 . . . 3.77 90.84 35 6.92 Yes 46 0.53 No 0 0 No -34 0.59 No 46 60.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52437115 - NM_004656 BAP1 0 . . . 6.9 84.77 22 6.08 Yes 34 0.42 No 0 0 No -21 0.82 Yes 34 82.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33434034 - NM_002878 RAD51D 0 . . . 0.15 0 16 4.87 No 18 1.71 Yes 0 0 No -20 0.69 Yes 40 85.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47633132 + NM_000251 MSH2 0 . . . 3.61 63.27 9 4.69 No 54 0.25 No 0 0 No -23 0.62 No 32 90.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69045478 + NM_133509 RAD51B 0 . . . 2.41 74.82 30 5.02 No 3 0.4 No 0 0 No -29 0.82 Yes 51 68.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69151547 + NM_133509 RAD51B 0 . . . 8.24 78.51 16 4.61 No 10 1.37 Yes 0 0 No -23 0.62 No 48 52.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131970743 + NM_005732 RAD50 0 . . . 1.82 71.67 20 4.69 No 45 0.85 Yes 0 0 No -19 0.86 Yes 13 65.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89625218 + NM_000314 PTEN 0 . . . 0.69 63.5 25 5.19 No 66 0.08 No 0 0 No -24 0.9 Yes 49 65.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68437173 + NM_133509 RAD51B 0 . . . 6.58 79.3 30 5.42 No 42 -0.89 No 0 0 No -23 0.62 No 45 57.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47770251 + NM_000251 MSH2 0 . . . 3.99 87.21 29 7.68 Yes 76 0.73 No 0 0 No -28 0.67 Yes 52 49.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68850313 + NM_133509 RAD51B 0 . . . 0.52 61.68 32 4.22 No 63 0.98 Yes 0 0 No -31 0.83 Yes 45 71.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108146012 + NM_000051 ATM 0 . . . 2.63 76.88 17 6.85 Yes 58 0.69 No 0 0 No -16 0.71 Yes 19 64.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23640792 - NM_024675 PALB2 0 . . . 0.27 57.82 21 5.19 No 46 1.11 Yes 0 0 No -20 0.81 Yes 41 51.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215622831 - NM_000465 BARD1 0 . . . 6.45 69.98 22 5.73 Yes 48 2.09 Yes 0 0 No -27 0.65 No 26 39.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68557471 + NM_133509 RAD51B 0 . . . 3.7 75.37 21 4.89 No 70 0.7 No 0 0 No -20 0.51 No 14 68.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59888347 - NM_032043 BRIP1 0 . . . 4.6 80.61 28 5.38 No 6 0.85 Yes 0 0 No -27 0.91 Yes 45 47.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6041369 - NM_000535 PMS2 0 . . . 3.11 71.99 41 6.67 Yes 23 1.59 Yes 0 0 No -33 0.5 No 45 64.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68992117 + NM_133509 RAD51B 0 . . . 2.02 76.88 23 5.38 No 20 0.39 No 0 0 No -22 0.58 No 50 64.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32945372 + NM_000059 BRCA2 0 . . . 2.37 0 41 7.4 Yes 9 1.14 Yes 0 0 No -46 0.4 No 49 42.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59829876 - NM_032043 BRIP1 0 . . . 4.4 74.87 15 4.82 No 40 0.8 Yes 0 0 No -20 0.96 Yes 43 55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68855431 + NM_004360 CDH1 0 . . . 3.92 71.33 23 4.71 No 22 0.51 No 0 0 No -22 0.61 No 36 58.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23647393 - NM_024675 PALB2 0 . . . 3.89 93.81 57 7.24 Yes 66 -3.96 No 0 0 No -34 0.35 No 47 43.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68829229 + NM_004360 CDH1 0 . . . 2.9 75.79 18 6.18 Yes 35 0.72 No 0 0 No -26 0.57 No 48 36.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68707979 + NM_133509 RAD51B 0 . . . 5.78 74.02 22 4.87 No 70 1.18 Yes 0 0 No -29 0.89 Yes 32 43.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33426233 - NM_002878 RAD51D 0 . . . 5.09 75.63 22 5.26 No 50 -1.66 No 0 0 No -21 0.7 Yes 25 57.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47775136 + NM_000251 MSH2 0 . . . 7.03 73.3 24 5.42 No 72 -3.82 No 0 0 No -23 0.75 Yes 43 49.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32933077 + NM_000059 BRCA2 0 . . . 1.24 72.55 32 5.42 No 75 -4.2 No 0 0 No -31 0.56 No 58 49.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90953451 - NM_002485 NBN 0 . . . 1.86 72.54 25 4.34 No 20 1.08 Yes 0 0 No -17 0.41 No 48 69.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68503693 + NM_133509 RAD51B 0 . . . 9.23 85.37 25 6.4 Yes 6 0.82 Yes 0 0 No -24 0.38 No 43 80.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215636826 - NM_000465 BARD1 0 . . . 0.23 77.81 21 4.9 No 51 0.23 No 0 0 No -20 0.54 No 41 40.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694844 + NM_000534 PMS1 0 . . . 1.16 61.96 31 4.64 No 48 0.34 No 0 0 No -28 0.46 No 27 46.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89679782 + NM_000314 PTEN 0 . . . 2.59 64.49 17 3.74 No 71 0.3 No 0 0 No -20 0.65 No 42 27.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89643661 + NM_000314 PTEN 0 . . . 0.95 0 28 5.38 No 29 0.7 No 0 0 No -27 0.67 Yes 29 46.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32897148 + NM_000059 BRCA2 0 . . . 2.5 73.25 34 6.91 Yes 70 -2.15 No 0 0 No -33 0.49 No 51 75.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48026896 + NM_000179 MSH6 0 . . . 3.15 75.17 19 5.37 No 36 0.42 No 0 0 No -18 0.65 No 50 72.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108130946 + NM_000051 ATM 0 . . . 2.24 80.12 10 6.63 Yes 7 1.16 Yes 0 0 No -20 0.44 No 51 62.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94223908 - NM_005591 MRE11 0 . . . 0.25 75.63 22 6.06 Yes 31 0.73 No 0 0 No -21 0.75 Yes 27 66.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69110126 + NM_133509 RAD51B 0 . . . 3.34 81.8 15 4.58 No 14 0.76 No 0 0 No -53 0.39 No 37 77.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68296766 + NM_133509 RAD51B 0 . . . 2.85 71.59 27 5.2 No 70 -5.69 No 0 0 No -20 0.33 No 49 55.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48018201 + NM_000179 MSH6 0 . . . 4.66 79.35 19 5 No 38 0.46 No 0 0 No -34 0.46 No 51 80.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68835155 + NM_133509 RAD51B 0 . . . 2.66 0 15 4.58 No 49 1.43 Yes 0 0 No -22 0.9 Yes 43 68.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90965094 - NM_002485 NBN 0 . . . 1.51 69.48 22 5.58 Yes 13 0.33 No 0 0 No -36 0.59 No 41 32.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41005547 + NM_001164269 RAD51 0 . . . 2.93 70.07 17 3.89 No 19 1.12 Yes 0 0 No -33 0.5 No 39 93.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190675704 + NM_000534 PMS1 0 . . . 3.24 77.75 27 5.1 No 10 0.06 No 0 0 No -22 0.58 No 48 71.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68484176 + NM_133509 RAD51B 0 . . . 2.95 70.85 35 6 Yes 18 0.29 No 0 0 No -34 0.47 No 40 88.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69101552 + NM_133509 RAD51B 0 . . . 1.25 75.87 9 4.69 No 21 -2.14 No 0 0 No -36 0.71 Yes 41 70.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68854085 + NM_004360 CDH1 0 . . . 3.17 70.75 23 6.08 Yes 27 0.11 No 0 0 No -22 0.83 Yes 43 50.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89631562 + NM_000314 PTEN 0 . . . 5.38 70.05 20 4.8 No 53 0.83 Yes 0 0 No -19 0.63 No 49 28.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94183483 - NM_005591 MRE11 0 . . . 5.05 77.85 35 6.78 Yes 22 0.43 No 0 0 No -34 0.9 Yes 45 77.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68932742 + NM_133509 RAD51B 0 . . . 4.04 76.76 32 5.22 No 73 -5.28 No 0 0 No -31 0.5 No 42 94.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59830717 - NM_032043 BRIP1 0 . . . 3.55 80.78 35 5.48 No 19 0.98 Yes 0 0 No -28 0.69 Yes 39 63.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59883920 - NM_032043 BRIP1 0 . . . 1.3 76.01 14 4.74 No 3 0.95 Yes 0 0 No -25 0.88 Yes 43 76.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29137611 - NM_001005735 CHEK2 0 . . . 8.03 88.43 23 4.69 No 53 1.17 Yes 0 0 No -22 0.52 No 34 45.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47701178 + NM_000251 MSH2 0 . . . 0.22 0 23 4.8 No 32 0.34 No 0 0 No -22 0.65 No 51 86.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1227809 + NM_000455 STK11 0 . . . 5 83.22 26 6.97 Yes -3 0.54 No 0 0 No -22 0.68 Yes 48 68.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89682702 + NM_000314 PTEN 0 . . . 10.96 87.67 18 7 Yes 21 1.69 Yes 0 0 No -17 0.56 No 42 71.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108206054 + NM_000051 ATM 0 . . . 1.2 64.84 9 4.8 No 20 0.49 No 0 0 No -21 0.45 No 48 44.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68411997 + NM_133509 RAD51B 0 . . . 6.35 74.92 30 5.91 Yes 2 1.37 Yes 0 0 No -28 0.69 Yes 49 76.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59837476 - NM_032043 BRIP1 0 . . . 7.88 79.05 25 5.28 No -4 0.79 Yes 0 0 No -28 0.89 Yes 36 55.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215652788 - NM_000465 BARD1 0 . . . 4.35 84.66 33 7.83 Yes 3 0.89 Yes 0 0 No -23 0.43 No 43 87.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68779603 + NM_004360 CDH1 0 . . . 1.94 76.27 36 5.95 Yes 33 0.53 No 0 0 No -25 0.44 No 25 87.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68578081 + NM_133509 RAD51B 0 . . . 1.96 72.89 15 5.03 No 3 0.75 No 0 0 No -24 0.63 No 47 72.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69087654 + NM_133509 RAD51B 0 . . . 0.7 76.22 22 5.91 Yes 29 0.33 No 0 0 No -21 0.75 Yes 51 88.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75507146 - NM_001040108 MLH3 0 . . . 8.87 94.29 83 9.77 Yes 32 0.99 Yes 0 0 No -36 0.83 Yes 13 86.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190686061 + NM_000534 PMS1 0 . . . 2.99 67.4 35 6 Yes 55 1.22 Yes 0 0 No -34 0.53 No 43 60.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68520189 + NM_133509 RAD51B 0 . . . 0.62 77.75 15 5.02 No 11 2.26 Yes 0 0 No -26 0.65 No 47 93.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69121884 + NM_133509 RAD51B 0 . . . 5.81 74.14 55 7.45 Yes 26 0.58 No 0 0 No -29 0.62 No 32 94.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131981936 + NM_005732 RAD50 0 . . . 8.32 80.18 38 6.16 Yes 48 2.1 Yes 0 0 No -27 0.6 No 47 75.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69029167 + NM_133509 RAD51B 0 . . . 6.36 81.28 21 6.16 Yes 10 0.34 No 0 0 No -31 0.53 No 48 84.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37070458 + NM_000249 MLH1 0 . . . 1.42 67.16 23 5.28 No 72 0.49 No 0 0 No -30 0.68 Yes 42 55.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131894289 + NM_005732 RAD50 0 . . . 0.41 67.3 26 5.09 No 36 -3.19 No 0 0 No -25 0.78 Yes 36 36.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94220714 - NM_005591 MRE11 0 . . . 1.99 70.28 14 4.57 No 61 1.17 Yes 0 0 No -22 0.66 No 44 70.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68343006 + NM_133509 RAD51B 0 . . . 0.1 67.4 22 5.04 No 31 0.71 No 0 0 No -21 0.61 No 48 78.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131910585 + NM_005732 RAD50 0 . . . 0.31 74.28 22 6.47 Yes 31 0.8 Yes 0 0 No -21 0.55 No 45 63.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59907561 - NM_032043 BRIP1 0 . . . 1.69 77.58 26 6.49 Yes 58 0.6 No 0 0 No -26 0.84 Yes 54 61.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69065170 + NM_133509 RAD51B 0 . . . 5.53 69.4 29 6.02 Yes 21 0.41 No 0 0 No -28 0.64 No 37 79.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69135751 + NM_133509 RAD51B 0 . . . 0.85 72.45 13 6.37 Yes 45 0.24 No 0 0 No -18 0.41 No 13 38.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37072505 + NM_000249 MLH1 0 . . . 4.28 81.36 43 7.42 Yes -1 0.46 No 0 0 No -31 0.7 Yes 42 83.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94203699 - NM_005591 MRE11 0 . . . 0.89 0 24 5.48 No -3 0.3 No 0 0 No -23 0.82 Yes 39 71.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68792459 + NM_004360 CDH1 0 . . . 4.6 59.79 36 6.08 Yes 5 0.12 No 0 0 No -35 0.95 Yes 53 57.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68744500 + NM_133509 RAD51B 0 . . . 5.22 90.44 14 5.65 Yes 57 -1.39 No 0 0 No -23 0.24 No 44 54.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68315533 + NM_133509 RAD51B 0 . . . 2.26 73.87 18 4.68 No 9 1.11 Yes 0 0 No -21 0.65 No 49 85.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59845672 - NM_032043 BRIP1 0 . . . 2.76 70.82 15 6.39 Yes 29 1.47 Yes 0 0 No -25 0.73 Yes 46 77.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56780372 + NM_058216 RAD51C 0 . . . 4.94 66.46 24 4.8 No 69 -5.32 No 0 0 No -23 0.46 No 42 79.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190743574 + NM_000534 PMS1 0 . . . 3.3 80 16 4.75 No 21 0.54 No 0 0 No -27 0.77 Yes 44 96.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68483595 + NM_133509 RAD51B 0 . . . 0.2 78.55 35 5.28 No 0 0.99 Yes 0 0 No -24 0.62 No 32 38.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68599383 + NM_133509 RAD51B 0 . . . 2.77 72.1 19 4.99 No 64 -4.89 No 0 0 No -18 0.53 No 49 21.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89687965 + NM_000314 PTEN 0 . . . 1.75 85.16 48 7.23 Yes 50 -2.22 No 0 0 No -20 0.58 No 42 52.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215673409 - NM_000465 BARD1 0 . . . 8.54 85.87 28 5.83 Yes 50 0.5 No 0 0 No -47 0.81 Yes 38 73.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47724458 + NM_000251 MSH2 0 . . . 5.76 85.6 17 6.93 Yes 53 1.46 Yes 0 0 No -29 0.58 No 39 79.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190654130 + NM_000534 PMS1 0 . . . 2.99 71.25 16 5.04 No 6 0.87 Yes 0 0 No -20 0.7 Yes 44 40.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89684182 + NM_000314 PTEN 0 . . . 2.99 0 27 6.3 Yes 46 0.65 No 0 0 No -26 0.62 No 38 61.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215617853 - NM_000465 BARD1 0 . . . 2.87 59.34 18 5.74 Yes 1 0.13 No 0 0 No -26 0.81 Yes 47 72.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68500268 + NM_133509 RAD51B 0 . . . 4.22 67.72 22 5.15 No 52 0.36 No 0 0 No -22 0.81 Yes 41 78.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32892463 + NM_000059 BRCA2 0 . . . 6.93 79.95 32 6.18 Yes 17 0.4 No 0 0 No -31 0.67 Yes 41 97.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68388752 + NM_133509 RAD51B 0 . . . 2.33 0 23 4.35 No 64 0.88 Yes 0 0 No -22 0.66 No 36 46.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23615986 - NM_024675 PALB2 0 . . . 1.96 89.01 24 6 Yes 76 1.25 Yes 0 0 No -23 0.92 Yes 50 63.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69009935 + NM_133509 RAD51B 0 . . . 4.09 69.93 31 6.07 Yes 12 0.3 No 0 0 No -30 0.67 Yes 46 69.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68799839 + NM_133509 RAD51B 0 . . . 6.31 85.36 29 5.29 No 24 1.92 Yes 0 0 No -28 0.79 Yes 34 94.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68479527 + NM_133509 RAD51B 0 . . . 1.81 0 29 5.74 Yes 35 1.5 Yes 0 0 No -28 0.88 Yes 34 81.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68960420 + NM_133509 RAD51B 0 . . . 5.51 83.84 12 5.39 No 4 1.16 Yes 0 0 No -26 0.38 No 46 51.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108162016 + NM_000051 ATM 0 . . . 4.52 73.3 24 5.53 No 42 -3.36 No 0 0 No -26 0.63 No 44 20.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6042519 - NM_000535 PMS2 0 . . . 6.61 85.77 31 7.18 Yes 46 0.27 No 0 0 No -48 0.57 No 48 82.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59777806 - NM_032043 BRIP1 0 . . . 5.59 77.27 22 6.78 Yes 5 0.94 Yes 0 0 No -21 0.45 No 48 51.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190704845 + NM_000534 PMS1 0 . . . 2.03 68.62 27 5.2 No 58 0.94 Yes 0 0 No -55 0.52 No 35 46.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190737379 + NM_000534 PMS1 0 . . . 2.4 83.57 25 5.29 No 65 -1.37 No 0 0 No -24 0.67 Yes 39 54.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68676671 + NM_133509 RAD51B 0 . . . 3.52 64.34 12 4.39 No 75 0.93 Yes 0 0 No -49 0.8 Yes 53 57.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68609902 + NM_133509 RAD51B 0 . . . 5.99 78.56 24 5.2 No 4 0.84 Yes 0 0 No -23 0.52 No 46 68.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68551034 + NM_133509 RAD51B 0 . . . 5.08 64.15 10 4 No 18 1.18 Yes 0 0 No -29 0.84 Yes 40 68.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48007553 + NM_000179 MSH6 0 . . . 1.74 72.79 14 5.39 No 27 0.43 No 0 0 No -54 0.77 Yes 46 54.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32926526 + NM_000059 BRCA2 0 . . . 2.69 66.08 30 5.82 Yes 23 0.29 No 0 0 No -29 0.8 Yes 47 71.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68532712 + NM_133509 RAD51B 0 . . . 2.39 68.74 24 4.79 No 23 0.88 Yes 0 0 No -23 0.58 No 35 94.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105181794 + NM_021930 RINT1 0 . . . 1.28 77.24 20 4.61 No 19 -3.36 No 0 0 No -20 0.56 No 42 57.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68397205 + NM_133509 RAD51B 0 . . . 2.02 76.17 15 4.58 No 75 0.25 No 0 0 No -40 0.44 No 28 40.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68836345 + NM_133509 RAD51B 0 . . . 11.58 81.25 18 4.9 No 28 1.35 Yes 0 0 No -37 0.64 No 43 84.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32959966 + NM_000059 BRCA2 0 . . . 4.43 69.08 23 5.2 No 55 -4.85 No 0 0 No -22 0.81 Yes 41 60.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59765675 - NM_032043 BRIP1 0 . . . 6.44 86.16 25 4.56 No 7 0.7 No 0 0 No -24 0.83 Yes 42 70.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47726653 + NM_000251 MSH2 0 . . . 1.59 69.91 20 5.65 Yes 0 0.74 No 0 0 No -25 0.83 Yes 52 29.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68648915 + NM_133509 RAD51B 0 . . . 1.51 0 25 5.54 No 47 0.49 No 0 0 No -24 0.74 Yes 48 69.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41267030 - NM_007294 BRCA1 0 . . . 0.81 69.15 25 4.93 No 42 0.6 No 0 0 No -38 0.75 Yes 33 66.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69005381 + NM_133509 RAD51B 0 . . . 4.92 61.67 18 4.33 No 73 -2.8 No 0 0 No -23 0.68 Yes 26 70.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68365533 + NM_133509 RAD51B 0 . . . 1.35 68.32 25 4.66 No 59 0.39 No 0 0 No -22 0.5 No 44 38.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190732498 + NM_000534 PMS1 0 . . . 4.2 69.48 49 7.96 Yes 29 1.26 Yes 24 0.79 Yes -23 0.53 No 29 74.66 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 190738327 + NM_000534 PMS1 0 . . . 4.21 73.4 25 5.13 No 49 1.34 Yes 0 0 No -29 0.32 No 40 37.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68369023 + NM_133509 RAD51B 0 . . . 5.7 78.87 19 4.15 No 44 0.46 No 0 0 No -18 0.3 No 39 61.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59936088 - NM_032043 BRIP1 0 . . . 7.28 75.26 29 5.66 Yes 74 -6.91 No 0 0 No -28 0.82 Yes 32 74.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59890203 - NM_032043 BRIP1 0 . . . 7 82.33 54 7.37 Yes 10 0.79 Yes 0 0 No -24 0.71 Yes 48 89.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68741258 + NM_133509 RAD51B 0 . . . 5.31 87 16 4.65 No 14 0.75 No 0 0 No -15 0.32 No 52 76.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152370549 - NM_005431 XRCC2 0 . . . 3.18 79.61 37 4.75 No 68 0.66 No 0 0 No -29 0.45 No 54 46.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29088920 - NM_001005735 CHEK2 0 . . . 0.98 78.4 31 5.97 Yes 75 -6.32 No 0 0 No -31 0.84 Yes 63 34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29139009 - NM_001005735 CHEK2 0 . . . 4.42 83.82 32 5.54 No 5 1.94 Yes 0 0 No -31 0.67 Yes 22 42.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69095790 + NM_133509 RAD51B 0 . . . 8.07 84.54 15 5.2 No 6 0.88 Yes 0 0 No -41 0.51 No 52 49.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68677717 + NM_133509 RAD51B 0 . . . 6.98 85.23 17 4.69 No 14 1.32 Yes 0 0 No -26 0.47 No 44 96.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41233515 - NM_007294 BRCA1 0 . . . 5.3 0 37 7.12 Yes 21 0.92 Yes 0 0 No -36 0.67 Yes 43 78.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89718757 + NM_000314 PTEN 0 . . . 3.06 84.24 17 4.3 No 54 0.61 No 0 0 No -29 0.7 Yes 52 79.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68867178 + NM_133509 RAD51B 0 . . . 4.79 84.2 35 5.75 Yes 60 1.06 Yes 0 0 No -34 0.78 Yes 48 89.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847944 + NM_133509 RAD51B 0 . . . 1.17 77.13 30 5.1 No -3 0.95 Yes 0 0 No -25 0.78 Yes 49 72.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6042056 - NM_000535 PMS2 0 . . . 1.52 78.05 17 5.29 No 3 0.78 Yes 0 0 No -27 0.54 No 46 76.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68489494 + NM_133509 RAD51B 0 . . . 1.54 70.01 24 5.48 No 25 0.04 No 0 0 No -25 0.6 No 50 79.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68312971 + NM_133509 RAD51B 0 . . . 1.35 77.51 23 5.29 No 33 -2.55 No 0 0 No -23 0.53 No 25 51.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1226243 + NM_000455 STK11 0 . . . 0.59 80.79 12 4.33 No 75 -1.73 No 0 0 No -24 0.37 No 51 65.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84408069 - NM_139076 FAM175A 0 . . . 4.05 74.67 21 3.38 No 11 0.12 No 0 0 No -29 0.67 Yes 47 34.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68926858 + NM_133509 RAD51B 0 . . . 2.15 74.32 19 4.76 No 39 1.13 Yes 0 0 No -18 0.66 No 56 31.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68290962 + NM_133509 RAD51B 0 . . . 4.17 0 49 6.6 Yes 73 0.29 No 0 0 No -17 0.69 Yes 51 69.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68855927 + NM_004360 CDH1 0 . . . 1.62 76.12 17 5.83 Yes 57 0.09 No 0 0 No -16 0.35 No 21 67.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1220227 + NM_000455 STK11 0 . . . 3.25 64.85 48 7.5 Yes NA NA NA 0 0 No -35 0.57 No 39 42.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68900267 + NM_133509 RAD51B 0 . . . 1.35 71.59 24 4.9 No 26 1.94 Yes 0 0 No -23 0.9 Yes 24 69.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68321277 + NM_133509 RAD51B 0 . . . 0.94 85.88 30 7.74 Yes 62 -5.15 No 0 0 No -29 0.75 Yes 49 59.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215588897 - NM_000465 BARD1 0 . . . 6.66 76.49 24 6.41 Yes 8 0.78 Yes 0 0 No -30 0.39 No 36 59.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47697957 + NM_000251 MSH2 0 . . . 3.81 81.28 35 6.74 Yes 6 1.4 Yes 0 0 No -34 0.6 No 37 43.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131901674 + NM_005732 RAD50 0 . . . 5.37 80.64 20 5 No -4 0.86 Yes 0 0 No -18 0.71 Yes 50 43.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59861068 - NM_032043 BRIP1 0 . . . 3.25 77.54 41 5.37 No 9 0.4 No 0 0 No -36 0.7 Yes 39 50.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89702767 + NM_000314 PTEN 0 . . . 3.56 75.87 18 4.9 No 68 0.12 No 0 0 No -57 0.5 No 46 78.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47724215 + NM_000251 MSH2 0 . . . 6.88 73.33 17 5.89 Yes 1 1.36 Yes 0 0 No -16 0.8 Yes 48 80.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94209697 - NM_005591 MRE11 0 . . . 5.51 76.04 23 5.83 Yes 43 -2.77 No 0 0 No -29 0.53 No 43 54.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68616444 + NM_133509 RAD51B 0 . . . 4.36 0 19 5 No 40 0.74 No 0 0 No -18 0.3 No 18 18.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47706546 + NM_000251 MSH2 0 . . . 2.08 66.34 19 5.35 No 55 -4.76 No 0 0 No -29 0.34 No 44 59.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68766698 + NM_133509 RAD51B 0 . . . 7.49 86.98 24 5.27 No 48 1.67 Yes 0 0 No -23 0.41 No 45 61.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69050039 + NM_133509 RAD51B 0 . . . 1.7 71.56 33 5.56 Yes 64 1.09 Yes 0 0 No -28 0.63 No 48 32.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215625827 - NM_000465 BARD1 0 . . . 1.73 65.43 44 8.57 Yes 76 0.24 No 0 0 No -28 0.27 No 40 61.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69119911 + NM_133509 RAD51B 0 . . . 1.95 68.72 15 4.58 No 55 1.91 Yes 0 0 No -32 0.53 No 43 50.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90990928 - NM_002485 NBN 0 . . . 4.8 78.14 18 4.87 No 9 1.15 Yes 0 0 No -21 0.16 No 35 78.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68335331 + NM_133509 RAD51B 0 . . . 7.35 81.43 32 5.04 No 12 0.07 No 0 0 No -31 0.72 Yes 46 88.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89674059 + NM_000314 PTEN 0 . . . 2.76 66.44 20 4.8 No 55 0.73 No 0 0 No -25 0.68 Yes 12 41.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90946797 - NM_002485 NBN 0 . . . 6.52 79.93 14 4.81 No 5 1.08 Yes 0 0 No -22 0.48 No 44 56.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68306869 + NM_133509 RAD51B 0 . . . 0.62 0 39 5.84 Yes 21 0.71 No 0 0 No -32 0.77 Yes 37 78.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68750501 + NM_133509 RAD51B 0 . . . 2.58 63.13 22 6.3 Yes 60 -1.78 No 0 0 No -28 0.84 Yes 38 54.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56771862 + NM_058216 RAD51C 0 . . . 3.97 84.41 14 5 No 12 1.1 Yes 0 0 No -22 0.62 No 41 85.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94196628 - NM_005591 MRE11 0 . . . 7.69 77.95 17 4.66 No 72 -1.87 No 0 0 No -50 0.67 Yes 44 49.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68288389 + NM_133509 RAD51B 0 . . . 4.61 87.43 16 5.2 No 34 1.11 Yes 0 0 No -28 0.73 Yes 24 78.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68394865 + NM_133509 RAD51B 0 . . . 0.7 83.13 20 6.54 Yes 22 1.29 Yes 0 0 No -30 0.55 No 45 75.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89631370 + NM_000314 PTEN 0 . . . 3.55 86.31 21 5.1 No 33 1.18 Yes 0 0 No -21 0.52 No 50 56.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68907852 + NM_133509 RAD51B 0 . . . 1.76 64.34 47 7.27 Yes 38 0.64 No 0 0 No -30 0.34 No 49 86.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59904977 - NM_032043 BRIP1 0 . . . 0.72 0 32 5.25 No 45 1.38 Yes 0 0 No -31 0.62 No 13 39.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68446061 + NM_133509 RAD51B 0 . . . 6.45 91.91 22 5 No 45 0.65 No 0 0 No -21 0.66 No 45 63.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47788552 + NM_000251 MSH2 0 . . . 1.33 0 24 5.29 No 72 -5.05 No 0 0 No -23 0.79 Yes 48 64.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68871856 + NM_133509 RAD51B 0 . . . 7.03 82.11 48 7.47 Yes 47 1.16 Yes 0 0 No -33 0.81 Yes 52 58.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108118343 + NM_000051 ATM 0 . . . 2.41 83 29 5.48 No 28 1.4 Yes 0 0 No -28 0.85 Yes 30 90.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68508890 + NM_133509 RAD51B 0 . . . 4.57 77.86 37 6.32 Yes 59 0.51 No 0 0 No -36 0.87 Yes 47 79.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23636726 - NM_024675 PALB2 0 . . . 0.32 74.91 16 4.39 No 32 0.51 No 0 0 No -29 0.48 No 25 38.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108149545 + NM_000051 ATM 0 . . . 4.51 72.97 29 5.66 Yes 61 1.46 Yes 0 0 No -27 0.44 No 50 76.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32891483 + NM_000059 BRCA2 0 . . . 5.93 87.6 29 4.57 No 33 0.92 Yes 0 0 No -28 0.88 Yes 48 71.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68453881 + NM_133509 RAD51B 0 . . . 1.38 76.02 35 5 No 48 -2.05 No 0 0 No -27 0.8 Yes 41 80.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47768440 + NM_000251 MSH2 0 . . . 1.3 0 25 4.99 No 4 -1.31 No 0 0 No -24 0.73 Yes 48 86.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69121496 + NM_133509 RAD51B 0 . . . 5.54 98.06 17 5.57 Yes 31 0.22 No 0 0 No -16 0.57 No 54 44.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69044382 + NM_133509 RAD51B 0 . . . 4.72 73.48 44 6.18 Yes 38 0.63 No 0 0 No -25 0.38 No 44 83.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68845019 + NM_004360 CDH1 0 . . . 0.3 68.91 20 4.32 No 45 1.1 Yes 0 0 No -19 0.42 No 30 89.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40997990 + NM_001164269 RAD51 0 . . . 3.92 86.29 14 4.47 No 10 1.31 Yes 0 0 No -30 0.72 Yes 48 90.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68579041 + NM_133509 RAD51B 0 . . . 0.66 77.96 31 5.97 Yes 5 0.83 Yes 0 0 No -30 0.72 Yes 47 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89728581 + NM_000314 PTEN 0 . . . 0.2 64.9 15 4.35 No 47 0.96 Yes 0 0 No -20 0.37 No 40 59.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6040538 - NM_000535 PMS2 0 . . . 1.02 68.36 15 5.44 No 59 1.47 Yes 0 0 No -28 0.35 No 42 93.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68460325 + NM_133509 RAD51B 0 . . . 2.48 65.83 20 5.1 No 71 0.86 Yes 0 0 No -19 0.66 No 31 66.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47656727 + NM_000251 MSH2 0 . . . 3.32 69.49 13 4.87 No 13 0.82 Yes 0 0 No -26 0.67 Yes 40 73.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68857475 + NM_004360 CDH1 0 . . . 0.12 75.39 35 7.78 Yes 75 -5.68 No 0 0 No -30 0.59 No 31 23.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41255291 - NM_007294 BRCA1 0 . . . 0.46 74.26 34 5.85 Yes 33 1.04 Yes 0 0 No -33 0.48 No 44 25.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41220421 - NM_007294 BRCA1 0 . . . 0.27 0 18 4.3 No 61 -2.7 No 0 0 No -25 0.36 No 42 56.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68744670 + NM_133509 RAD51B 0 . . . 1.89 75.18 23 6.24 Yes 33 1.16 Yes 0 0 No -22 0.59 No 25 76.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68459520 + NM_133509 RAD51B 0 . . . 5.11 78.58 21 4.14 No 72 -2.96 No 0 0 No -23 0.52 No 48 93.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52439262 - NM_004656 BAP1 0 . . . 2.93 76.51 28 4.95 No 12 0.15 No 0 0 No -27 0.53 No 46 77.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68286287 + NM_133509 RAD51B 0 . . . 3.95 78.38 21 8.54 Yes 31 -2.68 No 0 0 No -20 0.58 No 51 9.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89674693 + NM_000314 PTEN 0 . . . 7.21 86.6 22 6.24 Yes 61 1.94 Yes 0 0 No -24 0.52 No 20 72.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59769809 - NM_032043 BRIP1 0 . . . 0.58 0 24 4.63 No 76 0.17 No 0 0 No -23 0.47 No 33 26.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90944377 - NM_002485 NBN 0 . . . 0.62 75.24 17 6.93 Yes 39 0.82 Yes 0 0 No -16 0.44 No 48 46.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105187427 + NM_021930 RINT1 0 . . . 3.66 0 15 4.53 No 27 0.29 No 0 0 No -22 0.3 No 51 29.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68316181 + NM_133509 RAD51B 0 . . . 4.63 78.65 46 6.67 Yes 5 0.89 Yes 0 0 No -32 0.47 No 53 72.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47745980 + NM_000251 MSH2 0 . . . 5.56 82.21 18 7 Yes 15 1.13 Yes 0 0 No -17 0.46 No 43 69.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47699024 + NM_000251 MSH2 0 . . . 2.45 73.42 48 6.85 Yes 70 -6.46 No 0 0 No -29 0.63 No 47 51.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23621592 - NM_024675 PALB2 0 . . . 1.79 0 25 5.29 No 21 0.47 No 0 0 No -25 0.64 No 37 70.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105198256 + NM_021930 RINT1 0 . . . 3.35 74.76 37 6.22 Yes 55 -5.54 No 0 0 No -31 0.52 No 46 34.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89638682 + NM_000314 PTEN 0 . . . 7.87 80.53 33 5.3 No 33 0.93 Yes 0 0 No -19 0.69 Yes 42 89.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190649085 + NM_000534 PMS1 0 . . . 1.62 69.37 17 4.27 No 6 -0.5 No 0 0 No -25 0.46 No 52 16.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68925212 + NM_133509 RAD51B 0 . . . 2.13 0 73 8.08 Yes 47 0.83 Yes 0 0 No -56 0.51 No 22 66.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215664493 - NM_000465 BARD1 0 . . . 3.03 81.48 39 5.51 No 13 0.42 No 0 0 No -32 0.89 Yes 45 92.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59896267 - NM_032043 BRIP1 0 . . . 0.27 69.16 69 6.85 Yes 57 1.62 Yes 0 0 No -31 0.53 No 48 39.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23635261 - NM_024675 PALB2 0 . . . 1.97 0 44 5.35 No 36 0.92 Yes 0 0 No -30 0.88 Yes 22 90.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68725424 + NM_133509 RAD51B 0 . . . 2.4 0 33 7.45 Yes 36 1.01 Yes 0 0 No -27 0.56 No 22 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37084525 + NM_000249 MLH1 0 . . . 5.88 65.09 34 6.85 Yes -4 0.37 No 0 0 No -29 0.59 No 43 57.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29132489 - NM_001005735 CHEK2 0 . . . 2.74 71.3 50 8.24 Yes 71 -5.82 No 0 0 No -26 0.76 Yes 52 32.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89654081 + NM_000314 PTEN 0 . . . 4.46 76.66 25 3.9 No 74 0.56 No 0 0 No -28 0.9 Yes 48 80.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21977631 - NM_000077 CDKN2A 0 . . . 0.32 74.68 21 4.69 No 70 0.15 No 0 0 No -20 0.77 Yes 54 69.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7584330 - NM_000546 TP53 0 . . . 0.42 72.87 19 4.67 No 67 0.36 No 0 0 No -18 0.24 No 45 72.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68906027 + NM_133509 RAD51B 0 . . . 0.76 70.97 9 5 No 59 1.19 Yes 0 0 No -26 0.66 No 54 41.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23621989 - NM_024675 PALB2 0 . . . 3.98 75.77 28 5.38 No 48 0.55 No 0 0 No -27 0.75 Yes 44 65.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7565113 - NM_000546 TP53 0 . . . 0.09 0 21 5.94 Yes 69 0.12 No 0 0 No -20 0.58 No 51 47.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104170051 - NM_001100119 XRCC3 0 . . . 0.24 73.05 18 5.29 No 26 -2.52 No 0 0 No -24 0.55 No 55 62.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47699743 + NM_000251 MSH2 0 . . . 0.17 74.23 29 5.07 No 8 0.9 Yes 0 0 No -28 0.75 Yes 50 62.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69151347 + NM_133509 RAD51B 0 . . . 1.02 0 15 6.76 Yes 12 0.51 No 0 0 No -27 0.94 Yes 46 76.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68741534 + NM_133509 RAD51B 0 . . . 8.68 77.4 16 4.56 No 27 1.39 Yes 0 0 No -45 0.78 Yes 42 91.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68568358 + NM_133509 RAD51B 0 . . . 2.9 69.3 37 7.81 Yes 50 1.29 Yes 0 0 No -36 0.56 No 37 59.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41270171 - NM_007294 BRCA1 0 . . . 5.04 70.25 18 5.51 No 47 0.89 Yes 0 0 No -20 0.41 No 11 52.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108094162 + NM_000051 ATM 0 . . . 10.27 80.77 43 6.84 Yes 56 1.83 Yes 0 0 No -22 0.42 No 30 57.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47774306 + NM_000251 MSH2 0 . . . 0.08 0 11 5.74 Yes 13 0.85 Yes 0 0 No -26 0.65 No 45 56.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48029309 + NM_000179 MSH6 0 . . . 7.86 84.13 21 4.9 No 35 0.62 No 0 0 No -20 0.61 No 45 66.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68915806 + NM_133509 RAD51B 0 . . . 5.07 86.24 14 5.72 Yes 5 2.29 Yes 0 0 No -26 0.35 No 40 32.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90978133 - NM_002485 NBN 0 . . . 5.86 85.02 16 4.05 No 73 -3.72 No 0 0 No -19 0.45 No 42 52.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90954532 - NM_002485 NBN 0 . . . 3.62 78.54 19 3.79 No 6 0.72 No 0 0 No -25 0.4 No 37 60.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68654312 + NM_133509 RAD51B 0 . . . 4.49 76.5 15 5.56 Yes 34 0.27 No 0 0 No -24 0.67 Yes 49 55.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48015753 + NM_000179 MSH6 0 . . . 4.13 84.95 27 7.46 Yes 67 1.09 Yes 0 0 No -26 0.76 Yes 44 25.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59756571 - NM_032043 BRIP1 0 . . . 2.64 64.03 41 6.4 Yes 49 0.78 Yes 0 0 No -34 0.66 No 47 23.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921839 + NM_133509 RAD51B 0 . . . 2.59 68.78 33 4.87 No 69 -4.77 No 0 0 No -27 0.79 Yes 47 68.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33438275 - NM_002878 RAD51D 0 . . . 6.06 91.89 17 4.8 No 30 1.42 Yes 0 0 No -16 0.59 No 28 61.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69005957 + NM_133509 RAD51B 0 . . . 7.22 78.66 21 4.42 No 1 1.24 Yes 0 0 No -23 0.59 No 45 66.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68817187 + NM_133509 RAD51B 0 . . . 2.59 70.66 17 5.09 No 76 -4.95 No 0 0 No -20 0.89 Yes 46 71.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68594604 + NM_133509 RAD51B 0 . . . 2.79 65.14 32 5.57 Yes 54 0.69 No 0 0 No -25 0.91 Yes 50 69.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68791278 + NM_133509 RAD51B 0 . . . 1.04 64.29 25 5 No 0 0.36 No 0 0 No -24 0.89 Yes 43 80.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68862257 + NM_004360 CDH1 0 . . . 0.76 79.49 19 5.1 No 5 1.06 Yes 0 0 No -27 0.61 No 46 94.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215645253 - NM_000465 BARD1 0 . . . 3.56 71.19 28 5.38 No 67 -1.14 No 0 0 No -27 0.47 No 50 91.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68648879 + NM_133509 RAD51B 0 . . . 2.41 73.79 19 4.8 No 11 0.49 No 0 0 No -18 0.72 Yes 47 85.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69003412 + NM_133509 RAD51B 0 . . . 6.28 76.23 15 4.58 No 69 0.4 No 0 0 No -38 0.51 No 51 64.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23651628 - NM_024675 PALB2 0 . . . 1.85 0 21 4.76 No 0 0.24 No 0 0 No -32 0.33 No 54 59.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68334001 + NM_133509 RAD51B 0 . . . 1.51 83.84 23 5.39 No 49 1.37 Yes 0 0 No -22 0.72 Yes 60 39.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68865756 + NM_004360 CDH1 0 . . . 2.8 0 32 7.6 Yes 74 1.6 Yes 0 0 No -31 0.52 No 52 84.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59884826 - NM_032043 BRIP1 0 . . . 1.5 0 32 5.64 Yes 56 0.95 Yes 0 0 No -31 0.82 Yes 53 31.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37035866 + NM_000249 MLH1 0 . . . 0.36 59.83 12 5.12 No 71 -5.82 No 0 0 No -30 0.51 No 56 37.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68773455 + NM_133509 RAD51B 0 . . . 8.14 91.12 43 5.86 Yes 2 1.24 Yes 0 0 No -17 0.31 No 52 64.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41207167 - NM_007294 BRCA1 0 . . . 5.91 85.14 23 5.39 No 36 1.76 Yes 0 0 No -55 0.55 No 47 87.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56774873 + NM_058216 RAD51C 0 . . . 0.78 0 40 6.61 Yes 72 -5.1 No 0 0 No -39 0.92 Yes 48 38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59925510 - NM_032043 BRIP1 0 . . . 3.86 66.95 21 5.2 No 55 0.62 No 0 0 No -27 0.39 No 45 44.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68934470 + NM_133509 RAD51B 0 . . . 3.1 72.93 17 4.3 No 9 0.17 No 0 0 No -25 0.69 Yes 35 67.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47654998 + NM_000251 MSH2 0 . . . 3.89 64.97 51 7.63 Yes 1 0.44 No 0 0 No -50 0.84 Yes 57 62.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68814095 + NM_133509 RAD51B 0 . . . 1.21 69.08 23 4.69 No 47 -4.39 No 0 0 No -43 0.53 No 45 67.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47691322 + NM_000251 MSH2 0 . . . 1.07 79.13 23 6.53 Yes 67 -4.96 No 0 0 No -22 0.62 No 39 28.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94163240 - NM_005591 MRE11 0 . . . 5.26 78.93 38 6.31 Yes 32 0.98 Yes 0 0 No -37 0.71 Yes 38 78.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108103752 + NM_000051 ATM 0 . . . 1.35 71.74 27 5.74 Yes 52 0.57 No 0 0 No -26 0.86 Yes 48 74.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94174821 - NM_005591 MRE11 0 . . . 7.13 72.42 29 4.73 No 45 0.35 No 0 0 No -28 0.55 No 44 40.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68832378 + NM_133509 RAD51B 0 . . . 2.45 72.46 15 4.58 No 33 0.46 No 0 0 No -40 0.52 No 31 65.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94199530 - NM_005591 MRE11 0 . . . 5.56 81.06 11 4.8 No 65 1.16 Yes 0 0 No -53 0.5 No 46 85.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68560115 + NM_133509 RAD51B 0 . . . 3.95 75.74 49 6.92 Yes 29 0.49 No 0 0 No -48 0.47 No 46 49.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48017642 + NM_000179 MSH6 0 . . . 1.04 68.99 18 4.35 No 70 -6.23 No 0 0 No -56 0.74 Yes 44 71.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68789157 + NM_004360 CDH1 0 . . . 2.54 77.77 20 4.9 No 60 -4.62 No 0 0 No -19 0.76 Yes 47 52.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94200202 - NM_005591 MRE11 0 . . . 5.83 69.51 21 5.1 No 76 1.15 Yes 0 0 No -20 0.86 Yes 46 80.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68314003 + NM_133509 RAD51B 0 . . . 9.07 84.85 28 5.83 Yes 61 0.03 No 0 0 No -27 0.73 Yes 48 69.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68746297 + NM_133509 RAD51B 0 . . . 6.01 72.08 20 7.14 Yes 1 0.64 No 0 0 No -19 0.59 No 42 43.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21991636 - NM_000077 CDKN2A 0 . . . 2.38 63.31 11 3.87 No 44 0.06 No 0 0 No -25 0.5 No 47 83.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68743673 + NM_133509 RAD51B 0 . . . 1.82 71.7 37 5.58 Yes 52 -2.4 No 0 0 No -36 0.58 No 52 61.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1218260 + NM_000455 STK11 0 . . . 6.25 84.95 30 5.48 No 53 0.19 No 0 0 No -30 0.46 No 46 76.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47743786 + NM_000251 MSH2 0 . . . 2.3 67.46 16 4.86 No 14 0.05 No 0 0 No -20 0.74 Yes 22 56.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190695069 + NM_000534 PMS1 0 . . . 3.13 0 16 4.69 No 59 1.67 Yes 0 0 No -43 0.51 No 26 16.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68300975 + NM_133509 RAD51B 0 . . . 4.93 69.84 30 7.48 Yes 45 1.13 Yes 0 0 No -29 0.81 Yes 52 40.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215630146 - NM_000465 BARD1 0 . . . 7.96 92.47 22 6.31 Yes 15 0.74 No 0 0 No -26 0.28 No 43 81.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131957567 + NM_005732 RAD50 0 . . . 2.7 83.83 27 3.9 No 31 1.1 Yes 0 0 No -26 0.93 Yes 46 96.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68998467 + NM_133509 RAD51B 0 . . . 1.93 69.68 26 5.48 No 51 0.95 Yes 0 0 No -25 0.88 Yes 54 87.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190703262 + NM_000534 PMS1 0 . . . 5.19 76.74 18 4.79 No 64 1.18 Yes 0 0 No -44 0.8 Yes 39 52.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84385913 - NM_139076 FAM175A 0 . . . 5.47 73.26 23 5.39 No 36 -1.8 No 0 0 No -22 0.85 Yes 53 39.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68314127 + NM_133509 RAD51B 0 . . . 1.56 70.86 23 5.8 Yes 2 0.96 Yes 0 0 No -22 0.77 Yes 40 83.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108212224 + NM_000051 ATM 0 . . . 1.55 0 22 4.63 No 24 0.69 No 0 0 No -21 0.83 Yes 34 98.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41012411 + NM_001164269 RAD51 0 . . . 2.87 71.96 58 7.97 Yes 16 1.12 Yes 0 0 No -25 0.48 No 42 88.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89692449 + NM_000314 PTEN 0 . . . 2.79 74.6 26 5.89 Yes 8 0.23 No 0 0 No -25 0.63 No 50 84.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89705333 + NM_000314 PTEN 0 . . . 5.55 71.98 35 6.4 Yes 39 0.41 No 0 0 No -34 0.73 Yes 45 82.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41277896 - NM_007294 BRCA1 0 . . . 1.7 75.24 14 3.93 No 30 -0.26 No 0 0 No -26 0.48 No 48 66.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32945693 + NM_000059 BRCA2 0 . . . 4.66 75.31 45 7.08 Yes 47 0.96 Yes 0 0 No -27 0.38 No 46 92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68472789 + NM_133509 RAD51B 0 . . . 1.71 69.95 21 6.08 Yes 2 0.28 No 0 0 No -20 0.88 Yes 47 47.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68618679 + NM_133509 RAD51B 0 . . . 1.72 84.22 12 4.24 No 33 1.18 Yes 0 0 No -25 0.42 No 50 73.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68355335 + NM_133509 RAD51B 0 . . . 0.46 70.57 62 8.23 Yes 26 0.28 No 0 0 No -24 0.51 No 46 75.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190680569 + NM_000534 PMS1 0 . . . 6.13 90.12 16 5.48 No 48 0.6 No 0 0 No -15 0.48 No 47 72.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41196267 - NM_007294 BRCA1 0 . . . 0.78 77.88 21 6.53 Yes 24 1.29 Yes 0 0 No -26 0.55 No 50 90.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215607320 - NM_000465 BARD1 0 . . . 2.97 73.35 21 4.52 No -2 0.03 No 0 0 No -40 0.68 Yes 37 79.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68285842 + NM_133509 RAD51B 0 . . . 2.27 84.12 36 6.08 Yes 21 -1.2 No 0 0 No -30 0.72 Yes 54 35.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68739771 + NM_133509 RAD51B 0 . . . 0.86 61.37 28 5.38 No 41 -2.13 No 0 0 No -27 0.48 No 45 46.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59810595 - NM_032043 BRIP1 0 . . . 3.23 67.94 23 5.01 No 56 0.8 Yes 0 0 No -22 0.57 No 36 29.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105186295 + NM_021930 RINT1 0 . . . 5.18 85.49 38 6.32 Yes 1 1.48 Yes 0 0 No -22 0.75 Yes 45 61.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69088854 + NM_133509 RAD51B 0 . . . 6.58 76.91 16 5.49 No 48 2.29 Yes 0 0 No -15 0.32 No 49 84.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84382653 - NM_139076 FAM175A 0 . . . 2.51 74.94 20 5.33 No 39 0.95 Yes 0 0 No -25 0.24 No 46 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90953468 - NM_002485 NBN 0 . . . 4.17 76.86 23 5.73 Yes 61 0.96 Yes 0 0 No -26 0.33 No 43 81.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68648648 + NM_133509 RAD51B 0 . . . 0.98 66.41 25 5.57 Yes 50 0.2 No 0 0 No -24 0.44 No 40 55.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68478050 + NM_133509 RAD51B 0 . . . 6.25 92.19 36 6.98 Yes 46 0.85 Yes 0 0 No -30 0.77 Yes 44 59.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108171035 + NM_000051 ATM 0 . . . 3.04 79.62 34 5.55 No 54 1.12 Yes 0 0 No -21 0.31 No 46 68.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32927195 + NM_000059 BRCA2 0 . . . 5.8 77.32 36 4.98 No 3 0.45 No 0 0 No -29 0.43 No 51 82.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45802440 - NM_001048171 MUTYH 0 . . . 3.14 68.69 13 4.3 No 6 1.28 Yes 0 0 No -28 0.39 No 52 85.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68661537 + NM_133509 RAD51B 0 . . . 2.04 71.87 27 4.63 No 48 -2.78 No 0 0 No -26 0.75 Yes 47 68.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68801298 + NM_133509 RAD51B 0 . . . 0.95 0 17 6.93 Yes 22 -3.16 No 0 0 No -27 0.51 No 51 50.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108212028 + NM_000051 ATM 0 . . . 4.31 81.1 16 5.57 Yes 20 0.99 Yes 0 0 No -28 0.69 Yes 51 78.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59901580 - NM_032043 BRIP1 0 . . . 0.34 0 10 4 No 42 0.41 No 0 0 No -61 0.13 No 51 36.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59783168 - NM_032043 BRIP1 0 . . . 6.86 76.79 17 6.08 Yes 61 -4.16 No 0 0 No -16 0.78 Yes 43 82.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59856954 - NM_032043 BRIP1 0 . . . 4.83 79.82 16 5.29 No 64 0.16 No 0 0 No -21 0.66 Yes 44 45.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108177726 + NM_000051 ATM 0 . . . 2.92 66.34 9 3.87 No 51 1.11 Yes 0 0 No -26 0.74 Yes 36 42.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68850257 + NM_133509 RAD51B 0 . . . 8.09 93.67 18 6.16 Yes 7 1.01 Yes 0 0 No -31 0.62 No 51 97.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68292207 + NM_133509 RAD51B 0 . . . 0.35 74.31 18 4.66 No 72 0.8 Yes 0 0 No -20 0.57 No 41 61.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48020971 + NM_000179 MSH6 0 . . . 3.37 68.95 36 5.72 Yes 16 0.97 Yes 0 0 No -25 0.76 Yes 42 89.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90994484 - NM_002485 NBN 0 . . . 0.6 61.19 30 5.91 Yes 50 1.07 Yes 0 0 No -34 0.74 Yes 43 24.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7568487 - NM_000546 TP53 0 . . . 5.74 82.31 20 3.98 No 57 0.56 No 0 0 No -19 0.25 No 49 75.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21973697 - NM_000077 CDKN2A 0 . . . 7.11 81.41 35 6.38 Yes 15 2.19 Yes 0 0 No -34 0.74 Yes 43 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68693456 + NM_133509 RAD51B 0 . . . 8.7 84.02 21 4.9 No 13 1.43 Yes 0 0 No -27 0.55 No 45 91.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68673468 + NM_133509 RAD51B 0 . . . 2.2 70.25 13 4.8 No 49 1.21 Yes 0 0 No -20 0.86 Yes 45 42.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131956615 + NM_005732 RAD50 0 . . . 0.43 67.57 19 5.55 No 68 -2.48 No 0 0 No -48 0.7 Yes 24 45.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69023432 + NM_133509 RAD51B 0 . . . 1.16 68.36 15 5.36 No 75 -4.88 No 0 0 No -22 0.32 No 45 86.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68693813 + NM_133509 RAD51B 0 . . . 0.45 0 19 5.52 No 62 -5.19 No 0 0 No -25 0.66 Yes 26 80.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68870467 + NM_004360 CDH1 0 . . . 4.44 83.95 29 6.07 Yes 76 1.47 Yes 0 0 No -28 0.68 Yes 48 91.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69142260 + NM_133509 RAD51B 0 . . . 5.02 72.5 31 5.01 No 4 1.02 Yes 0 0 No -30 0.84 Yes 44 68.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33442476 - NM_002878 RAD51D 0 . . . 8.62 89.05 43 4.82 No 18 0.57 No 0 0 No -26 0.75 Yes 50 74.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68294887 + NM_133509 RAD51B 0 . . . 6.4 80.82 16 4.34 No 18 1.21 Yes 0 0 No -50 0.57 No 40 88.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6039229 - NM_000535 PMS2 0 . . . 4 82.27 19 5.17 No 38 1.19 Yes 0 0 No -23 0.66 No 20 93.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131969767 + NM_005732 RAD50 0 . . . 5.62 69.36 32 7.12 Yes 35 0.28 No 0 0 No -40 0.43 No 29 78.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59921467 - NM_032043 BRIP1 0 . . . 2.66 78.62 13 5.43 No 10 0.38 No 0 0 No -24 0.44 No 48 48.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108135189 + NM_000051 ATM 0 . . . 2.87 64.58 26 6.07 Yes 64 -5.25 No 0 0 No -25 0.53 No 45 55.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190664408 + NM_000534 PMS1 0 . . . 4.52 86.06 27 5.09 No 34 -2.78 No 0 0 No -26 0.44 No 47 68.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69016617 + NM_133509 RAD51B 0 . . . 2.16 63.9 19 4.52 No 60 1.34 Yes 0 0 No -24 0.78 Yes 43 46.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89731157 + NM_000314 PTEN 0 . . . 6.14 77.53 30 7.22 Yes 32 -1.79 No 0 0 No -29 0.79 Yes 41 85.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68584258 + NM_133509 RAD51B 0 . . . 1.73 0 52 6.41 Yes -3 0.05 No 0 0 No -37 0.65 No 41 35.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41205534 - NM_007294 BRCA1 0 . . . 1.94 68.84 23 4.79 No 52 0.9 Yes 0 0 No -30 0.62 No 48 78.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89725486 + NM_000314 PTEN 0 . . . 5.05 64.55 21 4.96 No 75 1.07 Yes 0 0 No -23 0.44 No 24 66.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68793725 + NM_004360 CDH1 0 . . . 3.4 65.22 12 4.24 No 15 1.28 Yes 0 0 No -29 0.89 Yes 43 89.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68784054 + NM_133509 RAD51B 0 . . . 7.9 76.13 26 4.66 No 9 0.3 No 0 0 No -28 0.89 Yes 49 87.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90961892 - NM_002485 NBN 0 . . . 5.98 63.31 38 5.38 No 30 0.83 Yes 0 0 No -34 0.36 No 42 74.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108237010 + NM_000051 ATM 0 . . . 7.37 84.51 28 5.25 No 29 0.48 No 0 0 No -27 0.9 Yes 48 63.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68748087 + NM_133509 RAD51B 0 . . . 0.54 64.01 11 6.63 Yes 75 0.36 No 0 0 No -23 0.51 No 32 36.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29103167 - NM_001005735 CHEK2 0 . . . 4.06 75.26 22 5.29 No 50 1.38 Yes 0 0 No -29 0.59 No 51 77.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68972756 + NM_133509 RAD51B 0 . . . 9.07 89.27 39 6.42 Yes 64 -1.04 No 0 0 No -38 0.4 No 42 66.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59828484 - NM_032043 BRIP1 0 . . . 6.39 76.91 12 4.69 No 6 0.55 No 0 0 No -19 0.74 Yes 41 82.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68804892 + NM_004360 CDH1 0 . . . 1.53 78.47 21 5 No 74 0.19 No 0 0 No -28 0.85 Yes 52 47.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59767087 - NM_032043 BRIP1 0 . . . 2.33 62.55 49 6.22 Yes 76 0.94 Yes 0 0 No -20 0.72 Yes 43 39.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59918293 - NM_032043 BRIP1 0 . . . 1.1 69.58 34 4.81 No 55 0.64 No 0 0 No -27 0.81 Yes 37 41.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69123056 + NM_133509 RAD51B 0 . . . 2.04 0 18 4.9 No 38 0.72 No 0 0 No -17 0.71 Yes 41 51.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29116673 - NM_001005735 CHEK2 0 . . . 5.72 81.75 29 4.35 No 19 0.26 No 0 0 No -23 0.68 Yes 39 44.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89639590 + NM_000314 PTEN 0 . . . 6.97 81.45 18 4.9 No 43 1.08 Yes 0 0 No -21 0.81 Yes 49 66.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89664690 + NM_000314 PTEN 0 . . . 4.57 85.02 23 6.34 Yes 4 1.25 Yes 0 0 No -22 0.89 Yes 47 75.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68491233 + NM_133509 RAD51B 0 . . . 7.13 88.99 24 5.29 No 28 1.52 Yes 0 0 No -23 0.54 No 40 67.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89684036 + NM_000314 PTEN 0 . . . 5.44 76.82 19 6.77 Yes 45 0.92 Yes 0 0 No -22 0.3 No 51 69.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47722588 + NM_000251 MSH2 0 . . . 2.93 71.08 41 6.78 Yes 49 -2.12 No 0 0 No -40 0.8 Yes 47 54.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104162158 - NM_001100119 XRCC3 0 . . . 0.81 0 17 3.98 No 21 0.74 No 0 0 No -28 0.93 Yes 37 47.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59874157 - NM_032043 BRIP1 0 . . . 3.99 78.84 15 6.23 Yes 28 1.06 Yes 0 0 No -24 0.49 No 26 63.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68800249 + NM_004360 CDH1 0 . . . 6.13 89.03 27 6.71 Yes 3 1.02 Yes 0 0 No -26 0.95 Yes 42 83.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68991524 + NM_133509 RAD51B 0 . . . 6.54 80.83 18 4.37 No 69 0.61 No 0 0 No -26 0.85 Yes 46 81.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29139098 - NM_001005735 CHEK2 0 . . . 0.56 65.92 21 5.04 No 42 0.18 No 0 0 No -20 0.43 No 53 28.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68389527 + NM_133509 RAD51B 0 . . . 1.08 84.22 26 6.15 Yes 33 0.79 Yes 0 0 No -25 0.34 No 51 40.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68494525 + NM_133509 RAD51B 0 . . . 6.57 79.78 19 5 No 16 0.69 No 0 0 No -21 0.49 No 49 66.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94207649 - NM_005591 MRE11 0 . . . 1.15 78.54 24 5.17 No 41 0.76 No 0 0 No -30 0.73 Yes 33 48.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68672800 + NM_133509 RAD51B 0 . . . 1.12 71.31 32 5.99 Yes 28 0.67 No 0 0 No -31 0.81 Yes 51 63.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90953597 - NM_002485 NBN 0 . . . 3.02 74.84 18 5.29 No 61 0.39 No 0 0 No -23 0.43 No 48 47.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68959337 + NM_133509 RAD51B 0 . . . 2.69 81.74 15 5.92 Yes 46 1.86 Yes 0 0 No -20 0.75 Yes 48 55.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68789411 + NM_133509 RAD51B 0 . . . 2.58 0 17 5.18 No 16 0.25 No 0 0 No -26 0.92 Yes 42 74.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37094232 + NM_000249 MLH1 0 . . . 1.15 74.17 49 7.06 Yes 65 0.55 No 0 0 No -21 0.8 Yes 36 90.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7592201 - NM_000546 TP53 0 . . . 7 88.57 24 6.04 Yes 15 0.07 No 0 0 No -23 0.77 Yes 43 95.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104162013 - NM_001100119 XRCC3 0 . . . 2.72 76.99 20 5 No 56 -1.89 No 0 0 No -19 0.77 Yes 45 54.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59859745 - NM_032043 BRIP1 0 . . . 1.99 83.13 31 5.44 No 41 1.4 Yes 0 0 No -17 0.71 Yes 34 56.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68922757 + NM_133509 RAD51B 0 . . . 4.32 75.04 31 5.74 Yes 72 0.94 Yes 0 0 No -26 0.35 No 43 63.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68382651 + NM_133509 RAD51B 0 . . . 1.09 70.53 15 5.4 No 53 -5.36 No 0 0 No -31 0.54 No 50 71.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41217315 - NM_007294 BRCA1 0 . . . 0.76 0 21 4.69 No 70 0.56 No 0 0 No -20 0.87 Yes 39 40.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90984574 - NM_002485 NBN 0 . . . 3.81 78.89 23 5 No 55 0.35 No 0 0 No -22 0.69 Yes 48 47.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68805027 + NM_133509 RAD51B 0 . . . 9.02 89.66 11 4.9 No 54 -1.28 No 0 0 No -18 0.59 No 42 84.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59856568 - NM_032043 BRIP1 0 . . . 9.83 77.09 29 5.95 Yes 27 1.79 Yes 0 0 No -31 0.42 No 45 72.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108182673 + NM_000051 ATM 0 . . . 0.68 0 31 7.25 Yes 13 1.49 Yes 0 0 No -30 0.79 Yes 45 52.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47655727 + NM_000251 MSH2 0 . . . 1.53 62.7 11 4.89 No 18 0.05 No 0 0 No -18 0.77 Yes 46 61.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59862600 - NM_032043 BRIP1 0 . . . 2.53 78.76 17 6.93 Yes 27 0.69 No 0 0 No -29 0.35 No 49 58.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69061696 + NM_133509 RAD51B 0 . . . 4.37 69.56 50 6.18 Yes 14 0.57 No 0 0 No -45 0.56 No 44 51.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68941120 + NM_133509 RAD51B 0 . . . 0.33 66.35 20 5.88 Yes 19 1.43 Yes 0 0 No -19 0.54 No 39 59.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32932342 + NM_000059 BRCA2 0 . . . 2.04 70.84 29 7 Yes 73 0.3 No 0 0 No -28 0.9 Yes 44 75.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68679234 + NM_133509 RAD51B 0 . . . 4.06 67.04 14 5.1 No 20 -2.05 No 0 0 No -23 0.52 No 50 68.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94214311 - NM_005591 MRE11 0 . . . 4.31 85.02 34 6.02 Yes 4 1.2 Yes 0 0 No -28 0.5 No 47 65.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89626828 + NM_000314 PTEN 0 . . . 2.6 0 27 5.59 Yes 71 1.48 Yes 0 0 No -32 0.32 No 47 90.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68750431 + NM_133509 RAD51B 0 . . . 2.2 73.5 30 5.27 No 38 -3.88 No 0 0 No -29 0.84 Yes 53 21.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68592370 + NM_133509 RAD51B 0 . . . 0.14 0 34 4.45 No 73 -5.18 No 0 0 No -33 0.41 No 31 26.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59825234 - NM_032043 BRIP1 0 . . . 4.51 71.84 32 6.93 Yes -2 1.37 Yes 0 0 No -31 0.57 No 45 44.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69112768 + NM_133509 RAD51B 0 . . . 0.74 62.31 21 4.31 No 72 0.45 No 0 0 No -25 0.75 Yes 48 59.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68887860 + NM_133509 RAD51B 0 . . . 11.26 87.79 20 4.69 No 28 0.22 No 0 0 No -19 0.81 Yes 35 61.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41214612 - NM_007294 BRCA1 0 . . . 3.5 67.66 65 5.76 Yes 64 -2.07 No 0 0 No -37 0.89 Yes 48 77.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68392358 + NM_133509 RAD51B 0 . . . 1.55 81.16 30 5.12 No 62 1.02 Yes 0 0 No -33 0.63 No 43 70.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105176044 + NM_021930 RINT1 0 . . . 3.97 86.56 20 4.15 No 75 1.17 Yes 0 0 No -23 0.81 Yes 11 51.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47629667 + NM_000251 MSH2 0 . . . 5.92 74.19 12 4.63 No 15 0.84 Yes 0 0 No -38 0.23 No 43 71.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68556937 + NM_133509 RAD51B 0 . . . 5.15 83.91 28 5.17 No -3 0.44 No 0 0 No -27 0.78 Yes 42 92.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89715597 + NM_000314 PTEN 0 . . . 1.81 71.44 25 5.49 No 75 -2.17 No 0 0 No -24 0.54 No 51 42.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21986233 - NM_000077 CDKN2A 0 . . . 0.85 0 27 5.2 No 44 0.32 No 0 0 No -58 0.52 No 60 37.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84391913 - NM_139076 FAM175A 0 . . . 5.76 93.1 22 6.16 Yes 37 0.91 Yes 0 0 No -19 0.47 No 45 56.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68771316 + NM_004360 CDH1 0 . . . 2.74 71.75 21 4.9 No 67 -3.27 No 0 0 No -20 0.85 Yes 34 25.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33435807 - NM_002878 RAD51D 0 . . . 0.02 56.02 14 5.44 No 14 0.63 No 0 0 No -27 0.87 Yes 30 41.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108103931 + NM_000051 ATM 0 . . . 5.83 72.39 23 5.39 No 48 0.42 No 0 0 No -20 0.52 No 40 71.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40995235 + NM_001164269 RAD51 0 . . . 7.71 83.98 14 5.29 No 42 2 Yes 0 0 No -35 0.32 No 44 94.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32943131 + NM_000059 BRCA2 0 . . . 2.38 85.51 17 5.65 Yes 6 1.19 Yes 0 0 No -16 0.62 No 52 84.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108174950 + NM_000051 ATM 0 . . . 3.44 68.42 20 5.1 No 54 0.46 No 0 0 No -19 0.41 No 34 57.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89702708 + NM_000314 PTEN 0 . . . 3.04 74.72 32 5.74 Yes 54 0.68 No 0 0 No -31 0.83 Yes 42 51.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68868043 + NM_004360 CDH1 0 . . . 0.84 71.02 26 5.1 No 6 1.1 Yes 0 0 No -25 0.75 Yes 52 48.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84403208 - NM_139076 FAM175A 0 . . . 5.89 79.79 22 4.3 No 8 0.38 No 0 0 No -24 0.83 Yes 44 67.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215595680 - NM_000465 BARD1 0 . . . 5.6 74.61 25 3.66 No 20 0.85 Yes 0 0 No -25 0.78 Yes 38 68.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68896928 + NM_133509 RAD51B 0 . . . 8.74 86.35 28 5.38 No 17 0.7 No 0 0 No -23 0.35 No 49 87.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68664611 + NM_133509 RAD51B 0 . . . 3.62 0 19 5.92 Yes 7 0.41 No 0 0 No -18 0.89 Yes 51 67.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68428436 + NM_133509 RAD51B 0 . . . 8.72 89.01 35 6.24 Yes 5 0.38 No 0 0 No -20 0.69 Yes 39 78.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131929183 + NM_005732 RAD50 0 . . . 5.52 68.84 22 5.19 No 57 0.97 Yes 0 0 No -22 0.44 No 38 86.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68645008 + NM_133509 RAD51B 0 . . . 0.56 0 15 4.41 No 24 0.8 Yes 0 0 No -20 0.52 No 42 48.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68928810 + NM_133509 RAD51B 0 . . . 0.06 67.41 19 4.5 No -3 0.02 No 0 0 No -24 0.9 Yes 51 45.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90947150 - NM_002485 NBN 0 . . . 2.57 52.93 9 4.35 No 54 0.11 No 0 0 No -32 0.53 No 53 76.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84400948 - NM_139076 FAM175A 0 . . . 5.56 86.87 11 4.9 No 6 1.18 Yes 0 0 No -19 0.38 No 52 85.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68327629 + NM_133509 RAD51B 0 . . . 4.11 70.17 35 6.32 Yes 22 1.07 Yes 0 0 No -15 0.44 No 36 87.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68883156 + NM_133509 RAD51B 0 . . . 1.39 66.98 23 5.82 Yes 20 0.77 No 0 0 No -22 0.77 Yes 37 61.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68989248 + NM_133509 RAD51B 0 . . . 6.92 82.55 27 6.47 Yes 9 1.05 Yes 0 0 No -27 0.57 No 46 58.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68679504 + NM_133509 RAD51B 0 . . . 0.28 68.2 34 5.63 Yes 52 0.27 No 0 0 No -23 0.74 Yes 44 33.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90977241 - NM_002485 NBN 0 . . . 2.12 86.31 33 7.05 Yes 33 0.42 No 0 0 No -32 0.75 Yes 50 65.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47706623 + NM_000251 MSH2 0 . . . 4.83 88.64 26 5.75 Yes 39 1.15 Yes 0 0 No -30 0.83 Yes 40 82.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94176597 - NM_005591 MRE11 0 . . . 7.87 84.9 12 5.39 No 18 0.99 Yes 0 0 No -28 0.39 No 40 68.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47711105 + NM_000251 MSH2 0 . . . 2.58 73.47 40 5.51 No 25 1.12 Yes 0 0 No -30 0.31 No 43 58.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68811416 + NM_133509 RAD51B 0 . . . 0.09 74.68 24 4.78 No 4 0.41 No 0 0 No -28 0.86 Yes 54 77.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29126166 - NM_001005735 CHEK2 0 . . . 4.09 74.21 17 4.22 No -2 0.4 No 0 0 No -21 0.49 No 14 13.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47743199 + NM_000251 MSH2 0 . . . 5.29 77.79 26 6.07 Yes 46 1.46 Yes 0 0 No -25 0.86 Yes 55 36.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48031231 + NM_000179 MSH6 0 . . . 1.04 74.66 32 5 No -4 0.53 No 0 0 No -27 0.57 No 48 48.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68735911 + NM_133509 RAD51B 0 . . . 0.76 74.31 35 7.26 Yes 41 0.81 Yes 0 0 No -28 0.44 No 46 24.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59876325 - NM_032043 BRIP1 0 . . . 0.09 0 22 5.83 Yes 9 0.12 No 0 0 No -27 0.75 Yes 29 71.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190728804 + NM_000534 PMS1 0 . . . 5.59 77.03 21 5.66 Yes 71 -5.64 No 0 0 No -20 0.65 No 46 55.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68870991 + NM_133509 RAD51B 0 . . . 1.05 63.8 23 6 Yes 76 0.14 No 0 0 No -22 0.4 No 49 32.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108184354 + NM_000051 ATM 0 . . . 8.41 83.74 30 6.38 Yes 21 1.58 Yes 0 0 No -29 0.63 No 37 91.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41194678 - NM_007294 BRCA1 0 . . . 4.15 75.28 16 5.06 No 51 -2.29 No 0 0 No -20 0.79 Yes 41 69.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89697174 + NM_000314 PTEN 0 . . . 2.79 66.69 21 4.13 No 72 0.81 Yes 0 0 No -20 0.94 Yes 49 70.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190727034 + NM_000534 PMS1 0 . . . 10.91 85.19 23 4.7 No 65 2.58 Yes 0 0 No -23 0.6 No 46 48.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6039350 - NM_000535 PMS2 0 . . . 4.06 78.09 65 8.26 Yes 52 1.44 Yes 0 0 No -27 0.85 Yes 49 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215666398 - NM_000465 BARD1 0 . . . 5.86 83.54 12 3.99 No 3 0.33 No 0 0 No -38 0.44 No 49 59.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23639781 - NM_024675 PALB2 0 . . . 5.19 68.38 13 4.95 No 41 0.82 Yes 0 0 No -25 0.49 No 39 86.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47704055 + NM_000251 MSH2 0 . . . 7.59 78.13 22 4.8 No -3 1.13 Yes 0 0 No -21 0.96 Yes 45 69.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108208060 + NM_000051 ATM 0 . . . 0.71 76.55 17 5 No 11 0.94 Yes 0 0 No -37 0.39 No 47 92.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68886025 + NM_133509 RAD51B 0 . . . 4.41 69.92 13 4.8 No 27 1.29 Yes 0 0 No -40 0.26 No 42 65.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68893743 + NM_133509 RAD51B 0 . . . 4.8 77.67 21 6.35 Yes 3 1.09 Yes 0 0 No -29 0.56 No 51 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59815785 - NM_032043 BRIP1 0 . . . 1.25 0 25 5.57 Yes 72 -4.95 No 0 0 No -42 0.42 No 55 45.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59844559 - NM_032043 BRIP1 0 . . . 6.37 79.84 31 5.34 No 64 0.81 Yes 0 0 No -23 0.35 No 44 59.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108136633 + NM_000051 ATM 0 . . . 2.03 74.97 18 4.66 No 65 -3.41 No 0 0 No -38 0.69 Yes 52 58.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37041007 + NM_000249 MLH1 0 . . . 7.62 82.12 21 5.44 No 20 0.58 No 0 0 No -24 0.8 Yes 38 49.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56769955 + NM_058216 RAD51C 0 . . . 0.63 68.77 19 3.22 No 9 0.43 No 0 0 No -43 0.43 No 49 63.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45804573 - NM_001048171 MUTYH 0 . . . 3.39 66.2 22 6.86 Yes 50 0.42 No 0 0 No -21 0.89 Yes 42 37.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68813852 + NM_004360 CDH1 0 . . . 9.59 86.25 23 6.07 Yes 6 0.88 Yes 0 0 No -30 0.76 Yes 47 73.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40996470 + NM_001164269 RAD51 0 . . . 1.42 72.26 24 4.67 No 21 0.87 Yes 0 0 No -20 0.6 No 60 35.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48016890 + NM_000179 MSH6 0 . . . 9.71 83.47 17 5.48 No 23 0.85 Yes 0 0 No -23 0.64 No 39 49.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29109325 - NM_001005735 CHEK2 0 . . . 2.04 64.59 19 4.88 No 45 0.86 Yes 0 0 No -30 0.72 Yes 54 27.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68940528 + NM_133509 RAD51B 0 . . . 0.78 70.35 34 5.79 Yes 10 0.4 No 0 0 No -29 0.78 Yes 48 70.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68888433 + NM_133509 RAD51B 0 . . . 2.67 0 13 5.1 No 28 -3.48 No 0 0 No -21 0.73 Yes 53 71.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108224441 + NM_000051 ATM 0 . . . 0.58 66.94 27 5.1 No -3 1 Yes 24 0.5 Yes -19 0.45 No 24 63.62 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 68709902 + NM_133509 RAD51B 0 . . . 6.69 84.52 26 6.45 Yes 57 0.34 No 0 0 No -25 0.74 Yes 43 62.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68781384 + NM_133509 RAD51B 0 . . . 7.07 83.68 29 4.26 No 68 -1.42 No 0 0 No -48 0.55 No 52 66.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48033834 + NM_000179 MSH6 0 . . . 1.71 64.79 28 5.39 No -4 1.26 Yes 0 0 No -28 0.9 Yes 58 25.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108159569 + NM_000051 ATM 0 . . . 2.11 70.42 19 7.05 Yes 1 0.46 No 0 0 No -18 0.56 No 43 65.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94175458 - NM_005591 MRE11 0 . . . 8.49 91.05 16 5.83 Yes 5 1.61 Yes 0 0 No -27 0.31 No 46 55.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69002314 + NM_133509 RAD51B 0 . . . 4.84 81.66 74 8.52 Yes 4 1.87 Yes 0 0 No -32 0.35 No 45 58.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69045732 + NM_133509 RAD51B 0 . . . 6.8 81.06 54 6.3 Yes 41 1.25 Yes 0 0 No -28 0.75 Yes 34 90.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6010370 - NM_000535 PMS2 0 . . . 2.07 68.36 23 4.99 No 41 -1.4 No 0 0 No -23 0.75 Yes 35 30.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68289946 + NM_133509 RAD51B 0 . . . 3.53 69.43 22 7.28 Yes 34 -4 No 0 0 No -21 0.55 No 47 67.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68446235 + NM_133509 RAD51B 0 . . . 4.41 76.31 44 7.25 Yes 44 1.3 Yes 0 0 No -22 0.51 No 45 81.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190655616 + NM_000534 PMS1 0 . . . 3.65 77.4 29 4.03 No 65 -5.39 No 0 0 No -28 0.87 Yes 46 61.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68975915 + NM_133509 RAD51B 0 . . . 4.98 72.15 19 2.99 No 12 1.5 Yes 0 0 No -24 0.94 Yes 46 69.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68814119 + NM_004360 CDH1 0 . . . 3.07 73.18 18 4.8 No 7 0.89 Yes 0 0 No -17 0.47 No 46 86.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47636102 + NM_000251 MSH2 0 . . . 3.54 0 26 6.62 Yes -4 0.13 No 0 0 No -25 0.67 Yes 49 52.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69095621 + NM_133509 RAD51B 0 . . . 1.9 0 25 4.9 No 60 1.17 Yes 0 0 No -24 0.81 Yes 51 30.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94215672 - NM_005591 MRE11 0 . . . 8.36 86.3 14 5.48 No 23 2.02 Yes 0 0 No -24 0.43 No 35 97.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41204691 - NM_007294 BRCA1 0 . . . 0.17 0 27 5.12 No 63 1.42 Yes 0 0 No -26 0.78 Yes 36 70.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23624508 - NM_024675 PALB2 0 . . . 2.35 72.1 36 7.43 Yes 61 -5.73 No 0 0 No -35 0.4 No 46 72.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69102871 + NM_133509 RAD51B 0 . . . 0.54 73.87 14 5.38 No 58 -4.2 No 0 0 No -28 0.29 No 41 74.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47665148 + NM_000251 MSH2 0 . . . 3.66 86.45 30 4.01 No 7 0.57 No 0 0 No -21 0.62 No 47 64.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41008658 + NM_001164269 RAD51 0 . . . 7.95 86.2 21 5.59 Yes 9 1.75 Yes 0 0 No -20 0.88 Yes 49 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94210612 - NM_005591 MRE11 0 . . . 4.67 70.72 19 5 No 2 0.93 Yes 0 0 No -18 0.42 No 42 75.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108139833 + NM_000051 ATM 0 . . . 0.8 66.77 17 4.8 No 57 0.69 No 0 0 No -47 0.43 No 41 67.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68805080 + NM_004360 CDH1 0 . . . 0.68 0 23 4.19 No 71 -2.75 No 0 0 No -26 0.55 No 39 78.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7570294 - NM_000546 TP53 0 . . . 5.04 75.43 18 7 Yes 28 0.91 Yes 0 0 No -22 0.43 No 30 73.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59916523 - NM_032043 BRIP1 0 . . . 0.12 74.8 26 5.1 No 0 0.98 Yes 0 0 No -25 0.85 Yes 50 46.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47743354 + NM_000251 MSH2 0 . . . 1.27 68.39 29 7.06 Yes 0 1.23 Yes 0 0 No -28 0.94 Yes 49 54.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56796618 + NM_058216 RAD51C 0 . . . 3.51 83.77 20 4.55 No 28 1.05 Yes 0 0 No -19 0.73 Yes 45 76.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59899028 - NM_032043 BRIP1 0 . . . 0.9 69.48 19 4.79 No 40 -5 No 0 0 No -45 0.53 No 55 29.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69037786 + NM_133509 RAD51B 0 . . . 2.18 72.27 21 4.9 No 74 1.24 Yes 0 0 No -20 0.89 Yes 43 55.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90964971 - NM_002485 NBN 0 . . . 4.01 78.65 34 7.07 Yes 62 0.56 No 0 0 No -33 0.92 Yes 42 71.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105206793 + NM_021930 RINT1 0 . . . 1.15 62.16 31 6.02 Yes 13 0.73 No 0 0 No -30 0.72 Yes 45 54.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69078959 + NM_133509 RAD51B 0 . . . 1.88 70.93 37 5.82 Yes 60 0.46 No 0 0 No -23 0.56 No 58 50.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33437712 - NM_002878 RAD51D 0 . . . 1.36 75.65 26 4.99 No 51 0.49 No 0 0 No -25 0.81 Yes 49 83.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56769780 + NM_058216 RAD51C 0 . . . 0.63 0 17 6.39 Yes -4 -1.09 No 0 0 No -16 0.72 Yes 41 87.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59799105 - NM_032043 BRIP1 0 . . . 0.19 76.63 13 5.29 No 58 -3.66 No 0 0 No -18 0.53 No 48 78.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68397901 + NM_133509 RAD51B 0 . . . 3.68 70.85 17 6.93 Yes 21 1.74 Yes 0 0 No -25 0.46 No 37 74.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68373990 + NM_133509 RAD51B 0 . . . 6.99 80.69 14 4.77 No 42 1.04 Yes 0 0 No -25 0.64 No 42 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56775953 + NM_058216 RAD51C 0 . . . 2.41 68.34 27 5.29 No 23 1.57 Yes 0 0 No -32 0.22 No 40 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105191072 + NM_021930 RINT1 0 . . . 9.33 91.61 29 5.29 No 65 0.66 No 0 0 No -28 0.46 No 49 82.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59805237 - NM_032043 BRIP1 0 . . . 3.79 70.31 18 7.04 Yes 57 -3.81 No 0 0 No -29 0.59 No 48 47.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68795815 + NM_004360 CDH1 0 . . . 6.82 77.99 22 6.65 Yes 63 -3.64 No 0 0 No -21 0.89 Yes 48 63.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68303015 + NM_133509 RAD51B 0 . . . 0.7 0 22 5.21 No 70 0.35 No 0 0 No -21 0.51 No 50 96.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68951095 + NM_133509 RAD51B 0 . . . 2.2 84.41 33 5.89 Yes 34 0.34 No 0 0 No -32 0.53 No 24 76.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69065447 + NM_133509 RAD51B 0 . . . 5.77 79.3 13 5.32 No 50 -0.7 No 0 0 No -12 0.2 No 44 69.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23650787 - NM_024675 PALB2 0 . . . 0.61 66.49 16 4.69 No 39 -0.36 No 0 0 No -15 0.43 No 55 27.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68492163 + NM_133509 RAD51B 0 . . . 6.33 73.91 27 4.82 No 46 0.51 No 0 0 No -26 0.42 No 46 86.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215646982 - NM_000465 BARD1 0 . . . 2.5 67.83 42 5.98 Yes 74 1.23 Yes 0 0 No -41 0.45 No 44 46.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68794233 + NM_133509 RAD51B 0 . . . 3.62 75.88 24 5.48 No 52 -3.02 No 0 0 No -51 0.39 No 42 84.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47719312 + NM_000251 MSH2 0 . . . 1.55 73.58 24 4.9 No 8 0.95 Yes 0 0 No -17 0.31 No 50 92.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190666858 + NM_000534 PMS1 0 . . . 2.74 74.41 15 5.17 No 35 0.89 Yes 0 0 No -21 0.31 No 39 50.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68581520 + NM_133509 RAD51B 0 . . . 0.9 74.24 19 5.51 No 20 0.04 No 0 0 No -29 0.88 Yes 48 71.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108096328 + NM_000051 ATM 0 . . . 0.48 0 29 5.41 No 42 1.66 Yes 0 0 No -28 0.57 No 41 46.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215615272 - NM_000465 BARD1 0 . . . 4.62 82.32 22 5.74 Yes 11 0.76 No 0 0 No -21 0.91 Yes 47 84.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68390935 + NM_133509 RAD51B 0 . . . 0.07 76.88 10 4 No 52 1.6 Yes 0 0 No -30 0.79 Yes 38 71.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89629334 + NM_000314 PTEN 0 . . . 1.42 66.94 21 4.69 No 66 -3.87 No 0 0 No -20 0.92 Yes 49 54.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68798527 + NM_004360 CDH1 0 . . . 0.44 0 20 3.63 No 49 0.19 No 0 0 No -19 0.84 Yes 60 15.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47754641 + NM_000251 MSH2 0 . . . 5.57 72.95 12 5.38 No 59 -2.22 No 0 0 No -22 0.74 Yes 47 92.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131896056 + NM_005732 RAD50 0 . . . 7.27 79.24 27 4.27 No 22 1.4 Yes 0 0 No -26 0.73 Yes 47 63.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108099170 + NM_000051 ATM 0 . . . 3.64 70.1 19 4.9 No 42 0.96 Yes 0 0 No -23 0.71 Yes 45 75.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68855831 + NM_133509 RAD51B 0 . . . 5.73 81.23 19 4.95 No 8 0.34 No 0 0 No -18 0.41 No 50 82.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32967324 + NM_000059 BRCA2 0 . . . 7.45 85.4 19 5.09 No 7 1.54 Yes 0 0 No -36 0.69 Yes 45 63.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84405958 - NM_139076 FAM175A 0 . . . 0.63 66.06 38 6.51 Yes 9 0.77 No 0 0 No -35 0.37 No 49 34.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1205065 + NM_000455 STK11 0 . . . 0.16 0 33 6.08 Yes 71 -2.28 No 0 0 No -32 0.43 No 49 35.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29130791 - NM_001005735 CHEK2 0 . . . 6.84 77.07 26 5.84 Yes 49 0.32 No 0 0 No -25 0.69 Yes 22 55.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68663409 + NM_133509 RAD51B 0 . . . 4.97 73.14 27 5.38 No 76 0.91 Yes 0 0 No -26 0.81 Yes 41 83.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68832808 + NM_133509 RAD51B 0 . . . 1.8 64.42 21 3.6 No 23 0.68 No 0 0 No -40 0.36 No 49 42.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37088118 + NM_000249 MLH1 0 . . . 3.09 84.41 17 5.25 No 52 0.09 No 0 0 No -25 0.45 No 41 33.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94153394 - NM_005591 MRE11 0 . . . 9.17 87.28 33 5.45 No 30 1.2 Yes 0 0 No -25 0.43 No 46 75.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47640272 + NM_000251 MSH2 0 . . . 6.13 81.73 17 6.08 Yes 43 0.11 No 0 0 No -16 0.63 No 34 42.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131924678 + NM_005732 RAD50 0 . . . 4.9 83.09 31 5.29 No 28 0.3 No 0 0 No -21 0.54 No 47 75.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108189943 + NM_000051 ATM 0 . . . 7.99 79.23 43 6.85 Yes 40 0.24 No 0 0 No -42 0.84 Yes 41 43.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47685773 + NM_000251 MSH2 0 . . . 3.63 65.88 12 5.29 No 59 1.46 Yes 0 0 No -23 0.77 Yes 42 91.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68520369 + NM_133509 RAD51B 0 . . . 0.3 66.92 22 5.52 No 19 0.99 Yes 0 0 No -25 0.76 Yes 39 68.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68753873 + NM_133509 RAD51B 0 . . . 1.62 66.17 22 6.32 Yes 43 1.59 Yes 0 0 No -21 0.58 No 15 82.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108157897 + NM_000051 ATM 0 . . . 2.99 75.5 21 5.2 No 61 -5.26 No 20 0.47 Yes -26 0.5 No 50 51.21 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 47690869 + NM_000251 MSH2 0 . . . 8.64 77.02 19 4.97 No 12 0.6 No 0 0 No -18 0.58 No 46 57.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152350940 - NM_005431 XRCC2 0 . . . 4.22 72.56 18 4.83 No -4 0.5 No 0 0 No -32 0.85 Yes 43 75.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190704083 + NM_000534 PMS1 0 . . . 2.09 75.77 54 5.88 Yes 5 1.22 Yes 0 0 No -53 0.83 Yes 49 93.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68790382 + NM_133509 RAD51B 0 . . . 1.5 71.42 23 4.69 No 40 0.61 No 0 0 No -23 0.52 No 48 52.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68837513 + NM_133509 RAD51B 0 . . . 0.32 74.68 20 5.82 Yes 4 0.1 No 0 0 No -25 0.48 No 54 83.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68727678 + NM_133509 RAD51B 0 . . . 3.97 73.14 13 4.92 No 0 1.06 Yes 0 0 No -21 0.83 Yes 45 60.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75508967 - NM_001040108 MLH3 0 . . . 4.67 73.44 26 4.96 No 49 -3.88 No 0 0 No -26 0.31 No 48 66.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68337480 + NM_133509 RAD51B 0 . . . 1.5 58.65 15 5.65 Yes 25 0.33 No 0 0 No -24 0.46 No 33 42.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23637989 - NM_024675 PALB2 0 . . . 0.38 76.63 15 5.48 No 58 -3.88 No 0 0 No -23 0.9 Yes 42 39.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108204027 + NM_000051 ATM 0 . . . 11.42 85.56 36 5.32 No 69 0.17 No 0 0 No -25 0.62 No 41 65.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68868790 + NM_133509 RAD51B 0 . . . 0.65 0 27 4.6 No 75 -5.85 No 0 0 No -29 0.85 Yes 52 53.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90976466 - NM_002485 NBN 0 . . . 2.59 68.49 29 5.28 No 59 0.82 Yes 0 0 No -28 0.42 No 40 59.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37093196 + NM_000249 MLH1 0 . . . 3.94 61.26 25 3.93 No 46 -1.98 No 0 0 No -24 0.85 Yes 41 79.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68628038 + NM_133509 RAD51B 0 . . . 4.53 83.68 31 6.08 Yes 68 0.08 No 0 0 No -30 0.69 Yes 49 72.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33434611 - NM_002878 RAD51D 0 . . . 0.85 72.96 23 4.62 No -4 0.12 No 0 0 No -26 0.71 Yes 41 49.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75517800 - NM_001040108 MLH3 0 . . . 1.48 0 29 5.3 No -4 -0.46 No 0 0 No -25 0.62 No 44 50.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94163900 - NM_005591 MRE11 0 . . . 0.45 67.3 23 5.2 No 4 0.41 No 0 0 No -43 0.49 No 54 89.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45793629 - NM_001048171 MUTYH 0 . . . 1.51 77.31 55 7.12 Yes NA NA NA 0 0 No -32 0.56 No 50 74.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105209720 + NM_021930 RINT1 0 . . . 1.71 0 36 6.4 Yes 61 0.84 Yes 0 0 No -23 0.7 Yes 40 63.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68441292 + NM_133509 RAD51B 0 . . . 5.1 84.47 25 4.26 No 56 -3.68 No 0 0 No -21 0.78 Yes 47 79.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69100568 + NM_133509 RAD51B 0 . . . 0.31 75.16 15 3.87 No 58 -1.41 No 0 0 No -28 0.63 No 29 63.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69090073 + NM_133509 RAD51B 0 . . . 3.89 69.12 21 5.2 No -4 0.28 No 0 0 No -27 0.77 Yes 27 46.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68773502 + NM_004360 CDH1 0 . . . 5.85 82.08 28 5.38 No 11 0.2 No 0 0 No -27 0.68 Yes 47 72.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68842799 + NM_004360 CDH1 0 . . . 2.5 78.15 10 5 No 0 1.13 Yes 0 0 No -52 0.33 No 47 86.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68997700 + NM_133509 RAD51B 0 . . . 5.67 91.2 15 5.48 No 7 0.78 Yes 0 0 No -25 0.53 No 51 90.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90969646 - NM_002485 NBN 0 . . . 1.53 64.33 34 6.15 Yes 22 1.38 Yes 0 0 No -33 0.7 Yes 30 81.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68372368 + NM_133509 RAD51B 0 . . . 4.07 0 38 6.17 Yes 59 1.83 Yes 0 0 No -32 0.41 No 44 70.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75511656 - NM_001040108 MLH3 0 . . . 2.03 83.39 34 5.21 No 3 0.31 No 0 0 No -29 0.61 No 49 61.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41203614 - NM_007294 BRCA1 0 . . . 2.6 58.78 17 4.46 No 66 0.24 No 0 0 No -26 0.5 No 47 30.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59892973 - NM_032043 BRIP1 0 . . . 1.27 62.42 15 5.39 No 16 1.05 Yes 0 0 No -28 0.26 No 42 47.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68286412 + NM_133509 RAD51B 0 . . . 1.58 73.45 39 6.04 Yes 61 -4.62 No 0 0 No -23 0.82 Yes 44 90.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68852735 + NM_133509 RAD51B 0 . . . 1.62 70.19 15 5.81 Yes 64 -2.47 No 0 0 No -21 0.9 Yes 49 91.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90979060 - NM_002485 NBN 0 . . . 5.43 87.7 26 5.2 No 12 1.25 Yes 0 0 No -25 0.89 Yes 46 71.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29130608 - NM_001005735 CHEK2 0 . . . 5.55 81.78 16 4.69 No 53 0.58 No 0 0 No -34 0.53 No 47 75.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47661732 + NM_000251 MSH2 0 . . . 6.89 88.51 35 6.4 Yes -2 -1.68 No 0 0 No -34 0.91 Yes 47 49.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32967789 + NM_000059 BRCA2 0 . . . 6.31 83.92 31 5.64 Yes 17 0.49 No 0 0 No -28 0.54 No 41 83.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56771814 + NM_058216 RAD51C 0 . . . 0.04 58.49 36 5.72 Yes 9 0.69 No 0 0 No -31 0.77 Yes 42 67.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131962056 + NM_005732 RAD50 0 . . . 5.31 0 16 4.69 No 68 1.03 Yes 0 0 No -45 0.71 Yes 42 72.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90990420 - NM_002485 NBN 0 . . . 0.83 58.51 17 3.64 No 69 -4.25 No 0 0 No -20 0.47 No 38 45.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131943902 + NM_005732 RAD50 0 . . . 5.67 83.89 18 6.04 Yes 18 0.98 Yes 0 0 No -30 0.81 Yes 40 66.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37079893 + NM_000249 MLH1 0 . . . 3.16 68.52 28 4.63 No 6 0.59 No 0 0 No -23 0.77 Yes 52 85.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48018519 + NM_000179 MSH6 0 . . . 2.5 67.28 27 7.11 Yes 76 0.01 No 0 0 No -26 0.62 No 45 84.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21980790 - NM_000077 CDKN2A 0 . . . 3.59 78.03 14 4.38 No 75 1.19 Yes 0 0 No -19 0.45 No 50 86.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68813457 + NM_004360 CDH1 0 . . . 5.18 76.04 22 4.04 No 53 1.11 Yes 0 0 No -21 0.6 No 41 86.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215655992 - NM_000465 BARD1 0 . . . 3.39 0 26 5.62 Yes 66 0.93 Yes 0 0 No -25 0.36 No 38 19.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69042219 + NM_133509 RAD51B 0 . . . 8.57 75.44 14 4.52 No 22 0.11 No 0 0 No -23 0.75 Yes 36 73.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68857920 + NM_004360 CDH1 0 . . . 4.74 84.41 16 5.19 No 53 0.14 No 0 0 No -22 0.7 Yes 40 96.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68865727 + NM_133509 RAD51B 0 . . . 0.63 55.86 20 7.14 Yes 66 0.16 No 0 0 No -19 0.69 Yes 47 69.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89662511 + NM_000314 PTEN 0 . . . 1.2 0 26 4.98 No 9 1.53 Yes 0 0 No -22 0.23 No 40 57.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69139112 + NM_133509 RAD51B 0 . . . 2.09 77.33 26 6.77 Yes 37 0.82 Yes 0 0 No -25 0.76 Yes 47 60.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68326083 + NM_133509 RAD51B 0 . . . 2.32 65.86 23 5.38 No 72 -5.56 No 0 0 No -22 0.67 Yes 52 54.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68832453 + NM_133509 RAD51B 0 . . . 3.68 65.14 24 4.9 No 46 0.19 No 0 0 No -23 0.78 Yes 48 91.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37064865 + NM_000249 MLH1 0 . . . 1.19 0 25 5.2 No 31 -2.71 No 0 0 No -43 0.58 No 59 39.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69018864 + NM_133509 RAD51B 0 . . . 1.01 63.38 64 7.12 Yes 2 0.71 No 0 0 No -22 0.81 Yes 52 48.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37060329 + NM_000249 MLH1 0 . . . 6.55 80.23 25 5.39 No 57 1.02 Yes 0 0 No -24 0.79 Yes 43 44.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215658446 - NM_000465 BARD1 0 . . . 0.22 61.69 24 5.29 No 39 0.89 Yes 0 0 No -23 0.72 Yes 44 84.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190695865 + NM_000534 PMS1 0 . . . 1.64 62.67 45 7.1 Yes 33 -3.71 No 0 0 No -28 0.48 No 48 48.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68654892 + NM_133509 RAD51B 0 . . . 8.49 90.32 29 5.29 No 66 1.18 Yes 0 0 No -40 0.54 No 36 53.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89710139 + NM_000314 PTEN 0 . . . 1.06 0 10 4 No 15 0.68 No 0 0 No -27 0.43 No 43 78.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48006573 + NM_000179 MSH6 0 . . . 3.97 73.88 31 5.83 Yes 32 0.99 Yes 0 0 No -30 0.71 Yes 40 52.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59862499 - NM_032043 BRIP1 0 . . . 3.62 74.55 14 5.65 Yes 70 0.37 No 0 0 No -22 0.72 Yes 45 57.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41272046 - NM_007294 BRCA1 0 . . . 1.37 63.9 16 4.98 No 56 0.52 No 0 0 No -39 0.58 No 48 52.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668661 - NM_000465 BARD1 0 . . . 7.41 82.86 40 5.34 No 12 0.76 No 0 0 No -40 0.75 Yes 46 90.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59859578 - NM_032043 BRIP1 0 . . . 5.26 79.86 23 4.32 No 9 1.22 Yes 0 0 No -22 0.79 Yes 39 74.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41224241 - NM_007294 BRCA1 0 . . . 5.2 85.02 29 6.32 Yes 5 1.23 Yes 0 0 No -28 0.88 Yes 53 78.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59759023 - NM_032043 BRIP1 0 . . . 7.05 83.74 9 3.87 No 69 -4.32 No 0 0 No -32 0.78 Yes 45 73.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37047895 + NM_000249 MLH1 0 . . . 4.48 70.98 66 9.34 Yes 44 -4.9 No 0 0 No -44 0.74 Yes 38 67.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84399039 - NM_139076 FAM175A 0 . . . 7.82 76.53 21 4.8 No 2 1.89 Yes 0 0 No -20 0.94 Yes 49 66.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32925392 + NM_000059 BRCA2 0 . . . 2.73 74.04 38 7.96 Yes 74 0.78 Yes 0 0 No -37 0.92 Yes 39 53.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68466462 + NM_133509 RAD51B 0 . . . 4.17 82.81 31 6.53 Yes 60 0.09 No 0 0 No -25 0.7 Yes 42 64.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32908056 + NM_000059 BRCA2 0 . . . 0.68 74.65 22 4.8 No 39 1.01 Yes 0 0 No -21 0.82 Yes 53 84.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108165142 + NM_000051 ATM 0 . . . 0.58 64.49 34 7.24 Yes 29 0.06 No 0 0 No -26 0.84 Yes 57 30.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190733597 + NM_000534 PMS1 0 . . . 3.37 70.75 13 3.49 No 24 1.76 Yes 0 0 No -23 0.67 Yes 34 78.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215631991 - NM_000465 BARD1 0 . . . 1.85 77.17 29 6.32 Yes 42 0.94 Yes 0 0 No -28 0.84 Yes 46 64.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69031387 + NM_133509 RAD51B 0 . . . 0.49 67.28 17 5.2 No 11 0.87 Yes 0 0 No -28 0.3 No 47 90.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69110378 + NM_133509 RAD51B 0 . . . 2.23 57.29 16 6.4 Yes 49 0.43 No 0 0 No -26 0.78 Yes 31 55.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68741212 + NM_133509 RAD51B 0 . . . 1.6 70.8 25 5.56 Yes 49 1.23 Yes 0 0 No -24 0.51 No 41 81.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68794408 + NM_004360 CDH1 0 . . . 9.19 89.76 31 6.42 Yes 16 1.62 Yes 0 0 No -31 0.42 No 42 82.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69102403 + NM_133509 RAD51B 0 . . . 3.15 84.48 29 5.48 No 24 1.03 Yes 0 0 No -23 0.67 Yes 34 85.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190647587 + NM_000534 PMS1 0 . . . 3.26 72.09 29 7.39 Yes 53 -2.31 No 0 0 No -28 0.6 No 52 66.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68968627 + NM_133509 RAD51B 0 . . . 1.67 0 19 4.98 No 60 0.68 No 0 0 No -19 0.64 No 59 52.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152364922 - NM_005431 XRCC2 0 . . . 2.3 79.71 21 4.8 No 31 1.08 Yes 0 0 No -20 0.88 Yes 27 60.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29115157 - NM_001005735 CHEK2 0 . . . 4.39 84.95 45 7.69 Yes 40 0.63 No 0 0 No -35 0.59 No 18 67.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48031174 + NM_000179 MSH6 0 . . . 3.08 69.36 22 5.29 No 71 -3.88 No 0 0 No -21 0.67 Yes 51 69.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131946121 + NM_005732 RAD50 0 . . . 0.58 76.79 30 6.44 Yes 51 0.55 No 0 0 No -29 0.69 Yes 47 33.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105180972 + NM_021930 RINT1 0 . . . 3.88 71.34 32 6.16 Yes 32 0.75 No 0 0 No -29 0.42 No 45 75.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89642308 + NM_000314 PTEN 0 . . . 1.84 65.79 21 5.1 No 62 0.25 No 0 0 No -45 0.43 No 46 35.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56777142 + NM_058216 RAD51C 0 . . . 6.19 82.46 34 7.62 Yes 45 0.12 No 0 0 No -33 0.69 Yes 46 63.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68813313 + NM_133509 RAD51B 0 . . . 0.28 0 17 5.83 Yes 51 0.83 Yes 0 0 No -16 0.38 No 40 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59920760 - NM_032043 BRIP1 0 . . . 5.73 74.56 26 5 No 2 0.59 No 0 0 No -25 0.52 No 44 90.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59848082 - NM_032043 BRIP1 0 . . . 4.13 0 12 5.74 Yes 61 2.39 Yes 0 0 No -28 0.4 No 48 56.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68402475 + NM_133509 RAD51B 0 . . . 5.81 71.27 12 5.74 Yes -3 0.01 No 0 0 No -45 0.49 No 38 92.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68895769 + NM_133509 RAD51B 0 . . . 1.66 75.56 22 4.28 No 5 0.62 No 0 0 No -42 0.46 No 53 83.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48021107 + NM_000179 MSH6 0 . . . 0.03 71.27 20 4.09 No -4 1.33 Yes 0 0 No -19 0.74 Yes 53 35.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68860781 + NM_133509 RAD51B 0 . . . 0.06 0 39 6.05 Yes 35 0.2 No 0 0 No -35 0.55 No 40 22.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75512670 - NM_001040108 MLH3 0 . . . 2.71 70.35 21 4.13 No 53 0.8 Yes 0 0 No -21 0.44 No 60 42.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68667024 + NM_133509 RAD51B 0 . . . 2.6 69.84 19 4.58 No 70 -5.21 No 0 0 No -18 0.74 Yes 38 41.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56768694 + NM_058216 RAD51C 0 . . . 3.82 73.26 19 4.42 No 50 0.67 No 0 0 No -39 0.48 No 55 37.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68778564 + NM_004360 CDH1 0 . . . 0.22 75.52 51 7.55 Yes 63 1.44 Yes 0 0 No -44 0.3 No 47 32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68814296 + NM_133509 RAD51B 0 . . . 0.25 73.1 45 6.3 Yes 76 0.29 No 0 0 No -39 0.38 No 56 18.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90984076 - NM_002485 NBN 0 . . . 3.77 0 21 5.04 No 46 1.32 Yes 0 0 No -20 0.49 No 22 58.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215658673 - NM_000465 BARD1 0 . . . 9.23 87.04 22 5.14 No 75 0.58 No 0 0 No -30 0.42 No 50 78.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37087324 + NM_000249 MLH1 0 . . . 0.72 75.47 41 5.97 Yes 27 1.75 Yes 0 0 No -28 0.9 Yes 50 56.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23613538 - NM_024675 PALB2 0 . . . 2.12 62.77 24 5.28 No 60 -2.23 No 0 0 No -26 0.71 Yes 44 46.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68837867 + NM_004360 CDH1 0 . . . 4.06 78.36 22 5.29 No 2 1 Yes 0 0 No -21 0.46 No 48 54.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68500431 + NM_133509 RAD51B 0 . . . 5.87 0 19 5.77 Yes 12 1.19 Yes 0 0 No -18 0.72 Yes 46 78.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7572285 - NM_000546 TP53 0 . . . 1.91 64.12 62 9.58 Yes -4 0.19 No 0 0 No -25 0.7 Yes 48 87.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68831598 + NM_133509 RAD51B 0 . . . 9.48 84.17 16 5.29 No 41 0.53 No 0 0 No -25 0.68 Yes 40 51.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47796224 + NM_000251 MSH2 0 . . . 0.55 75.31 21 5.52 No 61 -1.88 No 0 0 No -26 0.56 No 48 82.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68345266 + NM_133509 RAD51B 0 . . . 4.06 76.79 22 5.29 No 76 0.45 No 0 0 No -21 0.43 No 48 65.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105204306 + NM_021930 RINT1 0 . . . 3.98 71.31 17 4.58 No -3 0.79 Yes 0 0 No -39 0.55 No 49 75.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68778923 + NM_133509 RAD51B 0 . . . 2.72 75.13 52 7.62 Yes -3 0.45 No 0 0 No -51 0.92 Yes 42 55.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69147515 + NM_133509 RAD51B 0 . . . 5.21 73.05 23 3.9 No 31 0.86 Yes 0 0 No -22 0.5 No 40 47.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68946330 + NM_133509 RAD51B 0 . . . 0.71 65.09 26 4.77 No 14 2.03 Yes 0 0 No -26 0.67 Yes 44 87.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68846695 + NM_004360 CDH1 0 . . . 2 65.76 24 5.2 No 37 0.2 No 0 0 No -23 0.56 No 55 76.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33431044 - NM_002878 RAD51D 0 . . . 0.63 71.18 18 4.7 No 75 0.56 No 0 0 No -44 0.49 No 54 36.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90967446 - NM_002485 NBN 0 . . . 7.03 78.9 49 5.23 No 39 1.1 Yes 0 0 No -48 0.59 No 48 30.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89672917 + NM_000314 PTEN 0 . . . 8.71 88.74 22 4.79 No 8 1.38 Yes 0 0 No -21 0.76 Yes 43 66.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68812720 + NM_133509 RAD51B 0 . . . 0.57 62.79 16 5.73 Yes 4 0.58 No 0 0 No -26 0.52 No 54 86.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59764134 - NM_032043 BRIP1 0 . . . 6.9 96.69 24 4.99 No 73 0.88 Yes 0 0 No -23 0.77 Yes 44 83.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68559648 + NM_133509 RAD51B 0 . . . 2.98 74.54 19 5 No 35 0.79 Yes 0 0 No -18 0.37 No 43 89.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69055553 + NM_133509 RAD51B 0 . . . 4.37 72.47 20 4.71 No 52 1.56 Yes 0 0 No -26 0.81 Yes 46 68.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6032560 - NM_000535 PMS2 0 . . . 6.29 78.89 27 4.74 No 32 0.67 No 0 0 No -22 0.55 No 50 65.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89623150 + NM_000314 PTEN 0 . . . 5.75 72.41 29 5.44 No 28 -0.6 No 0 0 No -28 0.92 Yes 30 73.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75500992 - NM_001040108 MLH3 0 . . . 2.97 73.22 17 4.91 No 10 0.78 Yes 0 0 No -24 0.78 Yes 48 48.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47670838 + NM_000251 MSH2 0 . . . 3.57 78.68 42 7.04 Yes 75 -5.39 No 0 0 No -23 0.8 Yes 42 83.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59786097 - NM_032043 BRIP1 0 . . . 4.2 73.67 24 4.69 No 8 0.3 No 0 0 No -23 0.84 Yes 49 70.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94174489 - NM_005591 MRE11 0 . . . 1.98 78.5 20 4.38 No 66 1.14 Yes 0 0 No -19 0.84 Yes 47 77.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68764843 + NM_133509 RAD51B 0 . . . 0.37 70.54 44 4.9 No -4 0.28 No 0 0 No -29 0.84 Yes 50 52.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37075472 + NM_000249 MLH1 0 . . . 0.03 69.92 21 5.02 No 50 0.64 No 0 0 No -20 0.68 Yes 20 36.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68808354 + NM_133509 RAD51B 0 . . . 7.81 83.27 19 5 No 34 1.39 Yes 0 0 No -28 0.42 No 29 66.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59774101 - NM_032043 BRIP1 0 . . . 2.95 70.85 20 5.36 No 21 1 Yes 0 0 No -32 0.56 No 37 76.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37052871 + NM_000249 MLH1 0 . . . 1.32 71.11 34 5.54 No 72 -3.37 No 0 0 No -28 0.6 No 52 46.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646473 + NM_133509 RAD51B 0 . . . 6.97 79.34 58 8.12 Yes -4 0.48 No 0 0 No -57 0.44 No 34 36.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68657869 + NM_133509 RAD51B 0 . . . 4.56 92.6 14 4.9 No 20 0.26 No 0 0 No -19 0.28 No 21 63.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32946001 + NM_000059 BRCA2 0 . . . 3.14 70.99 22 5.1 No 61 0.02 No 0 0 No -21 0.86 Yes 47 80.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32919337 + NM_000059 BRCA2 0 . . . 0.16 55.13 33 6.55 Yes 38 0.69 No 0 0 No -30 0.59 No 20 77.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89642112 + NM_000314 PTEN 0 . . . 1.06 0 49 5.69 Yes 52 0.16 No 0 0 No -21 0.55 No 45 76.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89703940 + NM_000314 PTEN 0 . . . 4.05 73.59 21 5.32 No 18 0.37 No 0 0 No -27 0.6 No 40 72.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59874054 - NM_032043 BRIP1 0 . . . 2.92 54.54 16 5.29 No 71 1.72 Yes 0 0 No -21 0.57 No 38 42.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68695580 + NM_133509 RAD51B 0 . . . 1.56 61.94 23 4.37 No 42 0.98 Yes 0 0 No -23 0.64 No 16 32.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68824551 + NM_004360 CDH1 0 . . . 7.15 88.1 31 7.06 Yes 69 0.24 No 0 0 No -30 0.86 Yes 53 71.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23615545 - NM_024675 PALB2 0 . . . 3.87 82.5 19 4.78 No 44 1.2 Yes 0 0 No -30 0.3 No 46 50.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59826963 - NM_032043 BRIP1 0 . . . 3.68 73.08 23 4.75 No 43 -0.92 No 0 0 No -28 0.79 Yes 46 43.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68828764 + NM_133509 RAD51B 0 . . . 0.45 0 14 5.09 No 21 0.57 No 0 0 No -23 0.49 No 42 60.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68362658 + NM_133509 RAD51B 0 . . . 8.11 74.02 27 5.2 No 58 1.15 Yes 0 0 No -26 0.77 Yes 47 85.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152345174 - NM_005431 XRCC2 0 . . . 7.09 92.93 19 4.66 No 5 0.82 Yes 0 0 No -45 0.43 No 53 90.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68769647 + NM_004360 CDH1 0 . . . 3.15 85.81 29 6.25 Yes 9 1.03 Yes 0 0 No -28 0.55 No 49 94.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108137829 + NM_000051 ATM 0 . . . 0.8 0 43 6.63 Yes 56 0.17 No 0 0 No -35 0.47 No 59 33.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45800678 - NM_001048171 MUTYH 0 . . . 7.57 84.6 24 5.38 No 25 1.41 Yes 0 0 No -23 0.59 No 33 81.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68876763 + NM_133509 RAD51B 0 . . . 4.44 82.87 21 4.96 No 51 0.91 Yes 0 0 No -20 0.68 Yes 47 72.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47689376 + NM_000251 MSH2 0 . . . 1.87 80.12 20 5.06 No 6 1.13 Yes 0 0 No -26 0.57 No 52 59.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84389456 - NM_139076 FAM175A 0 . . . 9.14 84.5 33 5.65 Yes 29 1 Yes 0 0 No -32 0.53 No 35 75.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68950983 + NM_133509 RAD51B 0 . . . 7.19 73.65 21 5.52 No 1 0.6 No 0 0 No -26 0.6 No 42 56.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69139384 + NM_133509 RAD51B 0 . . . 5.88 78.39 36 4.93 No 66 -3.6 No 0 0 No -31 0.54 No 53 32.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47641072 + NM_000251 MSH2 0 . . . 2.71 70.35 19 2.46 No 52 1.21 Yes 0 0 No -27 0.76 Yes 60 45.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68386905 + NM_133509 RAD51B 0 . . . 2.9 74.03 9 3.87 No -2 0.69 No 0 0 No -24 0.54 No 55 61.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131959565 + NM_005732 RAD50 0 . . . 0.44 76.65 38 6.59 Yes 71 -4.55 No 0 0 No -32 0.56 No 51 46.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215665161 - NM_000465 BARD1 0 . . . 3.11 81.72 19 4.48 No 8 0.8 Yes 0 0 No -21 0.3 No 50 92.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47701628 + NM_000251 MSH2 0 . . . 0.73 83.14 17 6.33 Yes 45 1.15 Yes 0 0 No -16 0.78 Yes 30 91.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68456420 + NM_133509 RAD51B 0 . . . 0.87 69.14 25 4.03 No 56 -4.26 No 0 0 No -27 0.7 Yes 49 46.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104169929 - NM_001100119 XRCC3 0 . . . 1.2 0 22 8.19 Yes 52 -1.6 No 0 0 No -25 0.63 No 48 52.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190676596 + NM_000534 PMS1 0 . . . 4.28 76.34 22 4.86 No 43 0.33 No 0 0 No -26 0.6 No 46 84.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37071438 + NM_000249 MLH1 0 . . . 2.66 80.65 11 5.83 Yes 76 1.25 Yes 0 0 No -56 0.25 No 50 83.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68794073 + NM_004360 CDH1 0 . . . 3.75 76.09 31 6.88 Yes 55 0.49 No 0 0 No -30 0.88 Yes 17 45.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59793059 - NM_032043 BRIP1 0 . . . 0.35 55.54 25 4.71 No -1 0.3 No 0 0 No -24 0.92 Yes 59 43.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32943329 + NM_000059 BRCA2 0 . . . 2.98 75.28 23 6.7 Yes 46 1.53 Yes 0 0 No -22 0.66 Yes 52 47.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108167470 + NM_000051 ATM 0 . . . 7.36 83.59 32 7.28 Yes 19 -1.43 No 0 0 No -31 0.88 Yes 48 60.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32890161 + NM_000059 BRCA2 0 . . . 0.22 0 120 11.25 Yes 23 0.77 Yes 0 0 No -22 0.68 Yes 34 75.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68986663 + NM_133509 RAD51B 0 . . . 5.46 82.1 31 5.66 Yes 72 -4.22 No 0 0 No -30 0.82 Yes 53 21.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94225901 - NM_005591 MRE11 0 . . . 3.16 68.29 22 4.8 No 24 0.95 Yes 0 0 No -21 0.85 Yes 34 79.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41206607 - NM_007294 BRCA1 0 . . . 1.55 65.69 36 5.75 Yes 35 0.34 No 0 0 No -25 0.57 No 48 52.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68658195 + NM_133509 RAD51B 0 . . . 2.8 78.44 27 5.52 No 38 0.3 No 0 0 No -26 0.89 Yes 49 31.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89681549 + NM_000314 PTEN 0 . . . 1.4 69.13 28 5.5 No 45 -2.04 No 0 0 No -27 0.94 Yes 43 85.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68362945 + NM_133509 RAD51B 0 . . . 4.85 65.43 17 4.14 No 40 0.59 No 0 0 No -24 0.77 Yes 44 51.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69136422 + NM_133509 RAD51B 0 . . . 2.09 76.53 17 6.16 Yes 7 -1.36 No 0 0 No -22 0.5 No 51 37.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47651396 + NM_000251 MSH2 0 . . . 5.89 80.59 21 6.4 Yes 27 1.08 Yes 0 0 No -20 0.89 Yes 31 94.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131970294 + NM_005732 RAD50 0 . . . 4.47 70.43 15 4.02 No 59 0.77 Yes 0 0 No -32 0.86 Yes 49 40.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68326656 + NM_133509 RAD51B 0 . . . 4.28 85.37 21 5.74 Yes 33 1.12 Yes 0 0 No -20 0.9 Yes 44 34.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68853500 + NM_004360 CDH1 0 . . . 4.22 71.65 13 4.05 No 72 0.68 No 0 0 No -31 0.44 No 45 75.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68985044 + NM_133509 RAD51B 0 . . . 1.16 68.29 28 5.21 No 49 0.82 Yes 0 0 No -27 0.87 Yes 59 32.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89712319 + NM_000314 PTEN 0 . . . 0.83 79.54 20 5.54 No 18 0.52 No 0 0 No -19 0.49 No 52 48.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94164970 - NM_005591 MRE11 0 . . . 1.58 71.25 20 5.7 Yes 35 0.24 No 0 0 No -20 0.64 No 53 28.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1218766 + NM_000455 STK11 0 . . . 0.25 0 22 4.8 No 64 1.44 Yes 0 0 No -21 0.96 Yes 46 51.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59909879 - NM_032043 BRIP1 0 . . . 5.58 76.4 33 6.84 Yes 16 1.07 Yes 0 0 No -22 0.51 No 42 82.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90957759 - NM_002485 NBN 0 . . . 5.11 75.3 10 5.17 No 19 1.62 Yes 0 0 No -28 0.96 Yes 39 67.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68806448 + NM_133509 RAD51B 0 . . . 6.65 75.73 22 5.12 No 10 0.6 No 0 0 No -48 0.33 No 42 56.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94212681 - NM_005591 MRE11 0 . . . 8.3 76.54 39 6.48 Yes 27 1.04 Yes 0 0 No -38 0.66 No 44 92.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41009571 + NM_001164269 RAD51 0 . . . 5.82 86.85 26 6.15 Yes 69 -2.32 No 0 0 No -25 0.84 Yes 46 22.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68666663 + NM_133509 RAD51B 0 . . . 10.08 88.05 16 4.69 No NA NA NA 0 0 No -36 0.55 No 42 72.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190730218 + NM_000534 PMS1 0 . . . 2.48 67.59 22 5.73 Yes 21 0.13 No 0 0 No -21 0.74 Yes 30 68.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68846480 + NM_133509 RAD51B 0 . . . 5.54 74.85 20 5.1 No 73 -2.06 No 0 0 No -19 0.49 No 38 84.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37058589 + NM_000249 MLH1 0 . . . 1.95 50.96 23 5.61 Yes 38 -4.02 No 0 0 No -22 0.79 Yes 39 35.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68369587 + NM_133509 RAD51B 0 . . . 7.29 85.05 23 4.75 No 70 -3.96 No 0 0 No -22 0.83 Yes 46 80.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52438657 - NM_004656 BAP1 0 . . . 0.16 0 27 5.57 Yes 38 1.2 Yes 0 0 No -26 0.88 Yes 24 61.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48022144 + NM_000179 MSH6 0 . . . 2.46 74.26 15 4.53 No 33 1.02 Yes 0 0 No -17 0.49 No 25 50.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69070957 + NM_133509 RAD51B 0 . . . 2.38 79.6 19 4.91 No 67 -3.81 No 0 0 No -42 0.58 No 51 27.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32939619 + NM_000059 BRCA2 0 . . . 3.67 69.48 36 5.41 No 26 1.56 Yes 0 0 No -35 0.5 No 42 92.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48024311 + NM_000179 MSH6 0 . . . 2.08 64.02 13 4.11 No 75 0.73 No 0 0 No -19 0.31 No 43 67.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68812320 + NM_004360 CDH1 0 . . . 5.49 72.38 13 5.48 No 38 0.48 No 0 0 No -26 0.68 Yes 37 79.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23644248 - NM_024675 PALB2 0 . . . 2.54 78.55 13 3.93 No 7 1.01 Yes 0 0 No -35 0.53 No 51 71.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75489011 - NM_001040108 MLH3 0 . . . 11.91 82.22 17 6.08 Yes 69 -2.2 No 0 0 No -16 0.49 No 30 49.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47685536 + NM_000251 MSH2 0 . . . 2.91 76.29 17 4.8 No 24 1.54 Yes 0 0 No -17 0.34 No 30 62.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47769076 + NM_000251 MSH2 0 . . . 6.87 84.95 71 10.19 Yes 60 0.2 No 0 0 No -33 0.69 Yes 46 71.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41249149 - NM_007294 BRCA1 0 . . . 0.13 0 17 4.69 No 35 1.29 Yes 0 0 No -16 0.55 No 40 37.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215629464 - NM_000465 BARD1 0 . . . 7.79 84.86 18 4.9 No 41 2.16 Yes 0 0 No -17 0.7 Yes 35 63.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68499878 + NM_133509 RAD51B 0 . . . 0.09 71.35 9 5.48 No 76 0.33 No 0 0 No -23 0.41 No 31 63.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68757543 + NM_133509 RAD51B 0 . . . 0.66 82.92 32 6.55 Yes 73 -1.96 No 0 0 No -31 0.85 Yes 37 69.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68367580 + NM_133509 RAD51B 0 . . . 6.27 73.08 17 6.56 Yes 22 0.89 Yes 0 0 No -26 0.32 No 36 59.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68429827 + NM_133509 RAD51B 0 . . . 8.64 91.14 30 5.28 No 64 0.92 Yes 0 0 No -29 0.44 No 47 76.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59785886 - NM_032043 BRIP1 0 . . . 3.55 87.14 48 7.19 Yes 46 -2.16 No 0 0 No -27 0.45 No 47 35.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68651523 + NM_133509 RAD51B 0 . . . 5.16 79.61 14 4.99 No 45 0.48 No 0 0 No -23 0.96 Yes 43 75.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89730349 + NM_000314 PTEN 0 . . . 3.68 81.07 30 4.98 No 55 0.33 No 0 0 No -29 0.82 Yes 47 93.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215646784 - NM_000465 BARD1 0 . . . 5.56 82.79 35 8.49 Yes 74 1.1 Yes 0 0 No -35 0.53 No 44 71.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68416184 + NM_133509 RAD51B 0 . . . 2.5 0 15 5.03 No 52 1.39 Yes 0 0 No -42 0.57 No 49 75.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108095359 + NM_000051 ATM 0 . . . 2.5 74.78 26 4.67 No 31 0.29 No 0 0 No -26 0.45 No 48 70.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47630342 + NM_000251 MSH2 0 . . . 1.1 66.52 16 5.05 No 25 -2.35 No 0 0 No -20 0.72 Yes 45 40.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68404948 + NM_133509 RAD51B 0 . . . 5.86 0 24 5.48 No 51 1.23 Yes 0 0 No -23 0.88 Yes 49 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68315414 + NM_133509 RAD51B 0 . . . 1.1 66.92 20 4.44 No 72 0.81 Yes 0 0 No -44 0.59 No 43 82.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84402949 - NM_139076 FAM175A 0 . . . 4.12 76.63 14 4.47 No 71 -5.28 No 0 0 No -17 0.32 No 48 51.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41232628 - NM_007294 BRCA1 0 . . . 2.81 69.58 24 5.29 No 38 1.24 Yes 0 0 No -21 0.76 Yes 20 91.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37088342 + NM_000249 MLH1 0 . . . 2.46 73.89 12 3.84 No 67 1.05 Yes 0 0 No -34 0.44 No 52 55.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94216865 - NM_005591 MRE11 0 . . . 2.99 64.31 29 5.98 Yes 76 0.92 Yes 0 0 No -33 0.6 No 49 84.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23640257 - NM_024675 PALB2 0 . . . 0.4 0 17 4.43 No 13 1 Yes 0 0 No -21 0.5 No 37 42.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105188605 + NM_021930 RINT1 0 . . . 9.24 81.6 12 4.24 No 20 0.95 Yes 0 0 No -30 0.73 Yes 38 84.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68831008 + NM_004360 CDH1 0 . . . 2.3 64.59 25 4.9 No -3 0.18 No 0 0 No -24 0.43 No 35 62.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84405612 - NM_139076 FAM175A 0 . . . 2.32 74.47 29 7.5 Yes 59 -4.38 No 0 0 No -28 0.74 Yes 55 42.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59801448 - NM_032043 BRIP1 0 . . . 0.9 55.67 28 5.38 No 26 0.36 No 0 0 No -25 0.69 Yes 48 46.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48010122 + NM_000179 MSH6 0 . . . 3.44 77.14 15 5.39 No -4 1.25 Yes 0 0 No -26 0.39 No 48 33.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47730355 + NM_000251 MSH2 0 . . . 2.53 72.34 23 4.97 No 67 0.2 No 0 0 No -18 0.43 No 45 45.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68773919 + NM_004360 CDH1 0 . . . 3.07 69 22 5.27 No -3 0.04 No 0 0 No -26 0.53 No 52 42.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68536225 + NM_133509 RAD51B 0 . . . 3.44 65.64 66 7.83 Yes 70 1.73 Yes 0 0 No -25 0.48 No 46 82.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108157224 + NM_000051 ATM 0 . . . 3.55 78.33 26 5.66 Yes 72 -3.79 No 0 0 No -25 0.85 Yes 40 90.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69138101 + NM_133509 RAD51B 0 . . . 5.5 76.76 18 4.9 No 11 1.57 Yes 0 0 No -38 0.79 Yes 47 57.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108215831 + NM_000051 ATM 0 . . . 2.85 73.76 21 5.09 No 9 0.56 No 0 0 No -20 0.57 No 49 40.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45793391 - NM_001048171 MUTYH 0 . . . 1.06 70.87 12 4.24 No 59 0.76 No 0 0 No -25 0.68 Yes 14 32.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6033550 - NM_000535 PMS2 0 . . . 7.63 81.67 26 5.5 No 20 0.87 Yes 0 0 No -25 0.57 No 38 54.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59845740 - NM_032043 BRIP1 0 . . . 9.48 75.91 31 9.51 Yes 75 2.02 Yes 0 0 No -30 0.69 Yes 48 76.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68988095 + NM_133509 RAD51B 0 . . . 2.18 71.81 29 7.35 Yes 64 2.15 Yes 0 0 No -28 0.94 Yes 50 52.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190726361 + NM_000534 PMS1 0 . . . 4.11 80.86 18 5.29 No 75 -1.39 No 0 0 No -21 0.54 No 36 54.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68883444 + NM_133509 RAD51B 0 . . . 2.16 85.45 21 5.75 Yes 10 0.1 No 0 0 No -25 0.53 No 48 84.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68844482 + NM_133509 RAD51B 0 . . . 6.23 79.23 15 4.47 No 24 -0.86 No 0 0 No -44 0.5 No 38 83.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56800533 + NM_058216 RAD51C 0 . . . 7.27 91.18 22 4.29 No 11 0.47 No 0 0 No -21 0.61 No 47 87.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90976963 - NM_002485 NBN 0 . . . 1.01 80.76 20 4.5 No 37 -2.88 No 0 0 No -26 0.83 Yes 45 54.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68387880 + NM_133509 RAD51B 0 . . . 6.01 81.28 29 5.92 Yes 12 1.14 Yes 0 0 No -28 0.86 Yes 46 96.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68295501 + NM_133509 RAD51B 0 . . . 0.87 0 20 5.1 No 71 0.26 No 0 0 No -19 0.79 Yes 22 74.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105180734 + NM_021930 RINT1 0 . . . 1.22 0 32 5.27 No 35 1.45 Yes 0 0 No -31 0.43 No 46 61.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108199159 + NM_000051 ATM 0 . . . 3.33 85.51 18 4.9 No 8 1.34 Yes 0 0 No -24 0.7 Yes 50 91.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32901781 + NM_000059 BRCA2 0 . . . 0.92 76.63 38 4.34 No 70 -5.14 No 0 0 No -22 0.78 Yes 40 68.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68779845 + NM_133509 RAD51B 0 . . . 3.75 76.18 27 4.62 No 17 0.11 No 0 0 No -26 0.81 Yes 41 95.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215645867 - NM_000465 BARD1 0 . . . 3.6 79.07 13 5.29 No 13 0.16 No 0 0 No -22 0.33 No 45 84.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94180975 - NM_005591 MRE11 0 . . . 5.75 92.92 26 6.29 Yes 43 0.09 No 0 0 No -26 0.39 No 15 42.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89698292 + NM_000314 PTEN 0 . . . 9.14 88 18 4.88 No 35 0.29 No 0 0 No -23 0.82 Yes 35 37.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89731308 + NM_000314 PTEN 0 . . . 5.36 75.27 50 7.73 Yes -4 0.88 Yes 0 0 No -36 0.48 No 20 45.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108165608 + NM_000051 ATM 0 . . . 7.01 96.24 27 5.2 No 20 1.19 Yes 0 0 No -48 0.49 No 38 79.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152356004 - NM_005431 XRCC2 0 . . . 4.08 83.85 24 4.9 No 62 0.5 No 0 0 No -22 0.54 No 45 69.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69065354 + NM_133509 RAD51B 0 . . . 0.98 0 38 5.83 Yes 76 0.27 No 0 0 No -37 0.83 Yes 20 35.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190656961 + NM_000534 PMS1 0 . . . 10.85 88.66 19 5 No 37 1.54 Yes 0 0 No -18 0.57 No 49 41.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68766271 + NM_133509 RAD51B 0 . . . 3.59 80.88 33 5.6 Yes 62 0.07 No 0 0 No -32 0.67 Yes 51 62.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68848623 + NM_004360 CDH1 0 . . . 7.38 78.46 16 4.92 No 58 1.24 Yes 0 0 No -45 0.5 No 37 91.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190701670 + NM_000534 PMS1 0 . . . 2.55 71.57 39 4.94 No 62 0.65 No 0 0 No -19 0.38 No 43 48.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152372618 - NM_005431 XRCC2 0 . . . 4.18 69.85 55 8.77 Yes 45 1.68 Yes 0 0 No -27 0.73 Yes 42 82.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68427907 + NM_133509 RAD51B 0 . . . 6.27 87.44 21 8.08 Yes 6 1.25 Yes 0 0 No -20 0.8 Yes 52 83.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68752010 + NM_133509 RAD51B 0 . . . 2.71 75.37 40 5.36 No 15 1.02 Yes 0 0 No -39 0.53 No 47 92.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69138450 + NM_133509 RAD51B 0 . . . 5.97 79.87 21 5.2 No 0 2.33 Yes 0 0 No -40 0.91 Yes 37 71.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104164785 - NM_001100119 XRCC3 0 . . . 1.62 66.48 62 7.7 Yes 28 1.02 Yes 0 0 No -47 0.5 No 40 79.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68751409 + NM_133509 RAD51B 0 . . . 0.71 69.72 47 8.51 Yes 64 -5.38 No 0 0 No -46 0.74 Yes 51 44.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7588463 - NM_000546 TP53 0 . . . 0.7 71.45 26 7.07 Yes 2 0.46 No 0 0 No -25 0.49 No 44 82.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190710793 + NM_000534 PMS1 0 . . . 4.32 0 30 6.24 Yes 24 0.87 Yes 0 0 No -26 0.39 No 55 28.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29101747 - NM_001005735 CHEK2 0 . . . 3.2 80.01 13 4.35 No 7 1.02 Yes 0 0 No -11 0.33 No 51 80.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47731171 + NM_000251 MSH2 0 . . . 0.2 0 17 5.39 No 39 -2.22 No 0 0 No -42 0.3 No 38 47.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89654031 + NM_000314 PTEN 0 . . . 3.09 78.65 15 5.39 No 52 0.59 No 0 0 No -26 0.29 No 37 42.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131938074 + NM_005732 RAD50 0 . . . 3.37 83.24 20 4.69 No 8 0.6 No 0 0 No -19 0.65 No 50 75.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68962130 + NM_133509 RAD51B 0 . . . 2.5 69.98 32 5.47 No 19 -2.69 No 0 0 No -22 0.68 Yes 49 79.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29095124 - NM_001005735 CHEK2 0 . . . 0.86 67.17 9 5.29 No 54 0.22 No 0 0 No -18 0.24 No 36 36.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94173513 - NM_005591 MRE11 0 . . . 2.22 62.44 24 5.92 Yes 55 0.65 No 0 0 No -23 0.76 Yes 50 35.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68951982 + NM_133509 RAD51B 0 . . . 2.12 0 14 5.08 No 72 1.23 Yes 0 0 No -28 0.5 No 30 36.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108115127 + NM_000051 ATM 0 . . . 5.5 77.25 23 5.38 No 49 1.74 Yes 0 0 No -22 0.81 Yes 44 71.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69135876 + NM_133509 RAD51B 0 . . . 4.23 86.22 24 4.04 No 61 -3.64 No 0 0 No -14 0.47 No 52 41.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68573781 + NM_133509 RAD51B 0 . . . 6.7 76.73 22 4.69 No 39 1.14 Yes 0 0 No -21 0.69 Yes 32 60.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69050837 + NM_133509 RAD51B 0 . . . 4.79 82.21 37 6.1 Yes NA NA NA 0 0 No -39 0.59 No 49 35.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108198902 + NM_000051 ATM 0 . . . 11.15 84.8 35 6.4 Yes 19 1.52 Yes 0 0 No -34 0.68 Yes 39 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59905144 - NM_032043 BRIP1 0 . . . 4.83 77.62 20 4.8 No 12 0.82 Yes 0 0 No -57 0.67 Yes 46 65.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68808998 + NM_133509 RAD51B 0 . . . 5.84 74.32 23 4.08 No 27 0.56 No 0 0 No -22 0.56 No 41 50.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47797603 + NM_000251 MSH2 0 . . . 8.05 79.4 22 4.58 No 42 -2.21 No 0 0 No -18 0.43 No 49 59.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47702382 + NM_000251 MSH2 0 . . . 0.87 62.25 32 5.68 Yes 16 -2.41 No 0 0 No -31 0.63 No 49 60.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21975693 - NM_000077 CDKN2A 0 . . . 1.96 0 23 4.64 No 23 1.8 Yes 0 0 No -18 0.53 No 35 62.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68622095 + NM_133509 RAD51B 0 . . . 5.01 80.64 15 4.86 No 76 1.16 Yes 0 0 No -26 0.66 No 49 88.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68670049 + NM_133509 RAD51B 0 . . . 2.05 72.34 14 5.1 No 25 0.4 No 0 0 No -22 0.72 Yes 26 51.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47776480 + NM_000251 MSH2 0 . . . 2.91 72.39 20 3.86 No 47 -5.01 No 0 0 No -54 0.45 No 47 48.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68355870 + NM_133509 RAD51B 0 . . . 0.03 0 22 4 No 42 1.2 Yes 0 0 No -19 0.39 No 16 57.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68436873 + NM_133509 RAD51B 0 . . . 4.96 84.74 20 4.9 No 5 2.18 Yes 0 0 No -22 0.34 No 43 42.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69041875 + NM_133509 RAD51B 0 . . . 1.55 74.92 22 3.94 No 4 -1.2 No 0 0 No -21 0.93 Yes 54 23.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079804 + NM_000249 MLH1 0 . . . 2.14 0 18 3.49 No 35 0.69 No 0 0 No -24 0.76 Yes 50 39.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59843522 - NM_032043 BRIP1 0 . . . 5.08 78.85 38 7 Yes -3 1.16 Yes 0 0 No -37 0.64 No 51 82.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41206191 - NM_007294 BRCA1 0 . . . 7.42 71.19 20 4.58 No 23 0.66 No 0 0 No -24 0.43 No 35 86.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68656593 + NM_133509 RAD51B 0 . . . 0.55 71.64 25 5.57 Yes 33 1.21 Yes 0 0 No -25 0.38 No 14 42.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190703062 + NM_000534 PMS1 0 . . . 7.99 86.2 21 4.79 No 57 0.25 No 0 0 No -20 0.81 Yes 43 81.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59863637 - NM_032043 BRIP1 0 . . . 4.13 72.18 74 9.94 Yes 1 1.34 Yes 0 0 No -29 0.73 Yes 44 49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190716648 + NM_000534 PMS1 0 . . . 2.72 74.32 28 6.84 Yes 30 0.14 No 0 0 No -31 0.76 Yes 49 66.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68576950 + NM_133509 RAD51B 0 . . . 2.46 69.33 33 4.01 No 56 -3.35 No 0 0 No -27 0.39 No 49 68.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68959002 + NM_133509 RAD51B 0 . . . 1.69 70.78 11 5.1 No 40 1.65 Yes 0 0 No -23 0.73 Yes 18 84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190694712 + NM_000534 PMS1 0 . . . 2.66 63.14 34 4.02 No 61 1.7 Yes 0 0 No -36 0.68 Yes 46 67.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68555343 + NM_133509 RAD51B 0 . . . 0.66 0 28 6.16 Yes 71 -1.47 No 0 0 No -27 0.86 Yes 16 63.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32949023 + NM_000059 BRCA2 0 . . . 2.88 70.16 27 5.71 Yes 5 0.97 Yes 0 0 No -29 0.58 No 53 59.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215617368 - NM_000465 BARD1 0 . . . 4.06 72.92 27 7.15 Yes -1 0.68 No 0 0 No -26 0.84 Yes 43 54.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37067020 + NM_000249 MLH1 0 . . . 2.29 0 24 5.29 No 67 0.9 Yes 0 0 No -23 0.72 Yes 51 79.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6050211 - NM_000535 PMS2 0 . . . 0.43 74.68 21 4.81 No 53 0.62 No 0 0 No -21 0.35 No 51 36.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1206760 + NM_000455 STK11 0 . . . 1.52 76.13 19 4.58 No 17 1.23 Yes 0 0 No -18 0.55 No 41 81.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59843118 - NM_032043 BRIP1 0 . . . 2.66 63.59 23 4.9 No 26 0.31 No 0 0 No -22 0.53 No 32 72.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29107728 - NM_001005735 CHEK2 0 . . . 3.88 75.35 26 5 No 63 1.54 Yes 0 0 No -25 0.76 Yes 36 68.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59783941 - NM_032043 BRIP1 0 . . . 1.03 73.92 62 11.37 Yes 70 0.21 No 0 0 No -61 0.73 Yes 49 73.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215591371 - NM_000465 BARD1 0 . . . 0.82 59.46 24 5.94 Yes 51 0.54 No 0 0 No -23 0.85 Yes 36 83.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68970214 + NM_133509 RAD51B 0 . . . 3.4 66.85 18 5.23 No 11 1.46 Yes 0 0 No -31 0.59 No 43 78.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89686966 + NM_000314 PTEN 0 . . . 6.62 73.24 59 8.95 Yes 71 -4.11 No 0 0 No -31 0.81 Yes 39 46.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68450379 + NM_133509 RAD51B 0 . . . 0.09 68.44 25 5.88 Yes 55 -4.89 No 0 0 No -24 0.73 Yes 55 39.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59763411 - NM_032043 BRIP1 0 . . . 5.57 74.4 22 5.69 Yes 74 0.18 No 0 0 No -24 0.63 No 41 69.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69071389 + NM_133509 RAD51B 0 . . . 5.18 70.88 32 7.51 Yes 63 -3.2 No 0 0 No -31 0.58 No 43 49.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950624 + NM_005732 RAD50 0 . . . 9.86 82.77 16 5.83 Yes 10 0.82 Yes 0 0 No -15 0.28 No 48 67.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68376810 + NM_133509 RAD51B 0 . . . 7.4 86 27 5.1 No -3 1.07 Yes 0 0 No -55 0.35 No 48 52.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59925147 - NM_032043 BRIP1 0 . . . 5.66 82.85 39 4.93 No 70 0.74 No 0 0 No -25 0.5 No 50 53.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68764911 + NM_133509 RAD51B 0 . . . 0.69 73.94 17 5.57 Yes 60 -5.45 No 0 0 No -24 0.47 No 43 64.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89685785 + NM_000314 PTEN 0 . . . 7.75 86.31 27 6.02 Yes 45 0.92 Yes 0 0 No -26 0.93 Yes 46 73.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40992035 + NM_001164269 RAD51 0 . . . 3.1 72.65 26 5.66 Yes 12 0.85 Yes 0 0 No -25 0.48 No 46 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68518833 + NM_133509 RAD51B 0 . . . 2.15 0 23 6.16 Yes 61 0.7 No 0 0 No -22 0.86 Yes 34 52.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68969872 + NM_133509 RAD51B 0 . . . 7.5 75.34 29 5.88 Yes 72 0.75 No 0 0 No -28 0.42 No 38 66.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41198745 - NM_007294 BRCA1 0 . . . 6.08 86.14 22 3.7 No 5 1.5 Yes 0 0 No -26 0.88 Yes 18 70.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59846849 - NM_032043 BRIP1 0 . . . 4.49 70.55 19 4.5 No 23 0.61 No 0 0 No -18 0.89 Yes 45 68.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68875928 + NM_133509 RAD51B 0 . . . 0.87 54.65 25 6.27 Yes 52 -2.49 No 0 0 No -24 0.75 Yes 38 87.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89664123 + NM_000314 PTEN 0 . . . 2.89 69.68 26 5.38 No 48 1.02 Yes 0 0 No -25 0.71 Yes 34 82.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69084585 + NM_133509 RAD51B 0 . . . 8.26 98.02 45 6.06 Yes 74 0.03 No 0 0 No -31 0.53 No 49 70.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29102257 - NM_001005735 CHEK2 0 . . . 0.54 0 33 6.56 Yes 18 0.01 No 0 0 No -26 0.54 No 40 79.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69091008 + NM_133509 RAD51B 0 . . . 0.12 69.44 43 7.12 Yes -4 0.11 No 0 0 No -42 0.62 No 31 38.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68527706 + NM_133509 RAD51B 0 . . . 0.9 67.39 49 7.41 Yes 27 -2.13 No 0 0 No -33 0.46 No 54 59.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68495078 + NM_133509 RAD51B 0 . . . 3.66 80.46 32 5.23 No 53 1.3 Yes 0 0 No -24 0.82 Yes 17 52.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47750121 + NM_000251 MSH2 0 . . . 2.99 74.46 66 6.39 Yes 32 -2.25 No 0 0 No -22 0.43 No 46 53.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131893668 + NM_005732 RAD50 0 . . . 4.59 76.17 22 5.74 Yes 18 0.5 No 0 0 No -21 0.37 No 39 83.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69033612 + NM_133509 RAD51B 0 . . . 7.76 85.81 26 6.82 Yes 10 0.07 No 0 0 No -25 0.76 Yes 38 88.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47751743 + NM_000251 MSH2 0 . . . 4.21 73.18 15 5.6 Yes 71 -5.8 No 0 0 No -25 0.32 No 50 51.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41277178 - NM_007294 BRCA1 0 . . . 0.36 59.87 13 4.63 No 17 0.94 Yes 0 0 No -24 0.6 No 41 92.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47768974 + NM_000251 MSH2 0 . . . 4.61 87.32 51 7.18 Yes 10 0.46 No 0 0 No -24 0.51 No 48 86.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68870622 + NM_133509 RAD51B 0 . . . 2.35 81.35 21 5.07 No 74 0.83 Yes 0 0 No -20 0.49 No 44 70.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68562277 + NM_133509 RAD51B 0 . . . 6.96 77.35 16 4.61 No 24 0.33 No 0 0 No -22 0.42 No 34 77.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104177145 - NM_001100119 XRCC3 0 . . . 1.17 79.24 18 6.05 Yes 29 0.58 No 0 0 No -27 0.54 No 47 77.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68373558 + NM_133509 RAD51B 0 . . . 2.08 66.47 20 4.48 No 58 1.04 Yes 0 0 No -23 0.88 Yes 29 7.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47743375 + NM_000251 MSH2 0 . . . 5.28 70.27 25 6.16 Yes 21 1.22 Yes 0 0 No -24 0.8 Yes 49 41.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68862011 + NM_004360 CDH1 0 . . . 3.55 68.09 23 4.45 No 26 1.94 Yes 0 0 No -22 0.79 Yes 32 75.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68834321 + NM_004360 CDH1 0 . . . 0.68 0 12 4.24 No 27 1.09 Yes 0 0 No -24 0.5 No 31 85.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68855760 + NM_133509 RAD51B 0 . . . 4.15 65.88 28 5.29 No 54 -3.32 No 0 0 No -21 0.64 No 38 51.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59762550 - NM_032043 BRIP1 0 . . . 7.42 80.78 18 3.36 No 11 0.68 No 0 0 No -17 0.3 No 47 91.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89677657 + NM_000314 PTEN 0 . . . 3.78 80.58 23 5.35 No 8 1.17 Yes 0 0 No -27 0.71 Yes 46 95.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68427513 + NM_133509 RAD51B 0 . . . 2.41 71.37 34 6.42 Yes 17 0.57 No 0 0 No -20 0.52 No 41 68.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47644171 + NM_000251 MSH2 0 . . . 4.1 71.28 22 5.04 No 53 -5.47 No 0 0 No -21 0.73 Yes 43 39.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68447818 + NM_133509 RAD51B 0 . . . 1.08 76.74 17 4.58 No 66 -5.39 No 0 0 No -33 0.72 Yes 51 46.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131893498 + NM_005732 RAD50 0 . . . 1.06 83.49 17 6.05 Yes 30 1.36 Yes 0 0 No -23 0.48 No 52 39.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68464690 + NM_133509 RAD51B 0 . . . 5.24 0 26 5.39 No 41 0.94 Yes 0 0 No -25 0.78 Yes 46 62.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68942280 + NM_133509 RAD51B 0 . . . 7.31 87.95 32 6.47 Yes 12 -1.46 No 0 0 No -31 0.84 Yes 46 80.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56797252 + NM_058216 RAD51C 0 . . . 0.8 68.06 58 7.15 Yes 52 1.18 Yes 0 0 No -26 0.83 Yes 48 74.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108175579 + NM_000051 ATM 0 . . . 5.49 73.3 20 5.52 No 52 -0.13 No 0 0 No -27 0.64 No 47 31.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68916302 + NM_133509 RAD51B 0 . . . 4.43 77.65 21 4.73 No 62 -3.48 No 0 0 No -21 0.69 Yes 48 61.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68318460 + NM_133509 RAD51B 0 . . . 8.5 77.93 30 6.14 Yes 25 0.9 Yes 0 0 No -29 0.53 No 46 78.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105178935 + NM_021930 RINT1 0 . . . 3.16 0 35 5.87 Yes 25 -0.77 No 0 0 No -28 0.35 No 33 84.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131909645 + NM_005732 RAD50 0 . . . 7.78 94.44 18 4.9 No 70 1.28 Yes 0 0 No -17 0.41 No 48 80.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68515129 + NM_133509 RAD51B 0 . . . 1.55 66.17 15 5.3 No 1 0.06 No 0 0 No -28 0.65 No 23 63.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190702039 + NM_000534 PMS1 0 . . . 10.01 88.27 30 5.74 Yes 10 1.23 Yes 0 0 No -26 0.73 Yes 48 91.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40988977 + NM_001164269 RAD51 0 . . . 2.41 77.52 12 4.16 No 32 0.71 No 0 0 No -21 0.77 Yes 42 83.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89697701 + NM_000314 PTEN 0 . . . 1.71 59.76 20 4.9 No 32 1.04 Yes 0 0 No -19 0.93 Yes 43 79.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47682140 + NM_000251 MSH2 0 . . . 6.7 80.07 13 4.24 No 21 0.66 No 0 0 No -56 0.8 Yes 46 80.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29126420 - NM_001005735 CHEK2 0 . . . 2.05 73.7 56 7.86 Yes 51 1.39 Yes 0 0 No -28 0.37 No 51 69.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68601279 + NM_133509 RAD51B 0 . . . 5.77 80.28 16 4.04 No 62 0.7 No 0 0 No -26 0.51 No 47 70.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190702475 + NM_000534 PMS1 0 . . . 2.76 78.04 17 7.65 Yes 58 0.69 No 0 0 No -16 0.64 No 47 51.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68490225 + NM_133509 RAD51B 0 . . . 3.6 85.02 20 4.24 No 4 1.2 Yes 0 0 No -23 0.92 Yes 54 63.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131974698 + NM_005732 RAD50 0 . . . 2.2 70.87 21 7.95 Yes 19 1.2 Yes 0 0 No -20 0.5 No 39 80.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47641761 + NM_000251 MSH2 0 . . . 6.93 82.63 16 5.83 Yes 5 1.16 Yes 0 0 No -15 0.16 No 45 73.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32928781 + NM_000059 BRCA2 0 . . . 0.67 77.91 23 4.8 No 8 0.54 No 0 0 No -22 0.5 No 50 61.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68347552 + NM_133509 RAD51B 0 . . . 0.21 0 17 6.61 Yes 36 0.6 No 0 0 No -16 0.75 Yes 44 29.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108200815 + NM_000051 ATM 0 . . . 5.98 77.36 18 4.9 No 13 0.29 No 0 0 No -20 0.41 No 45 55.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33428694 - NM_002878 RAD51D 0 . . . 1.25 77.27 53 5.81 Yes 71 0.49 No 0 0 No -34 0.53 No 54 54.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144227 + NM_133509 RAD51B 0 . . . 1.06 75.2 21 5.2 No 32 0.7 No 0 0 No -20 0.16 No 43 69.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21982226 - NM_000077 CDKN2A 0 . . . 0.45 69.91 44 8.29 Yes 21 1.46 Yes 0 0 No -43 0.45 No 42 40.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68311305 + NM_133509 RAD51B 0 . . . 2.87 72.19 18 4.63 No 8 0.39 No 0 0 No -33 0.31 No 45 62.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68328592 + NM_133509 RAD51B 0 . . . 4.35 81.46 24 5.7 Yes 4 0.34 No 0 0 No -28 0.74 Yes 46 44.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89660398 + NM_000314 PTEN 0 . . . 1.78 74.24 35 6.23 Yes 26 -1.82 No 0 0 No -32 0.37 No 50 87.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68611935 + NM_133509 RAD51B 0 . . . 5.34 64.65 25 5.48 No 1 2.15 Yes 0 0 No -24 0.86 Yes 45 93.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32907635 + NM_000059 BRCA2 0 . . . 6.67 78.08 22 5.33 No 49 0.93 Yes 0 0 No -21 0.48 No 41 46.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68667699 + NM_133509 RAD51B 0 . . . 3.67 67.89 36 5.38 No 33 0.19 No 0 0 No -21 0.32 No 38 65.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68652408 + NM_133509 RAD51B 0 . . . 3.71 77.44 31 4.36 No 53 0.19 No 0 0 No -26 0.37 No 32 58.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41275140 - NM_007294 BRCA1 0 . . . 1.36 0 22 5.29 No 41 0.91 Yes 0 0 No -21 0.61 No 43 30.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40993060 + NM_001164269 RAD51 0 . . . 1.68 76.98 26 5.09 No 7 0.53 No 0 0 No -25 0.76 Yes 42 65.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68543492 + NM_133509 RAD51B 0 . . . 4.72 81.03 27 5.57 Yes 13 0.59 No 0 0 No -26 0.61 No 45 76.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152361870 - NM_005431 XRCC2 0 . . . 1.4 77.98 21 5.18 No 60 0.44 No 0 0 No -20 0.59 No 49 71.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90996756 - NM_002485 NBN 0 . . . 4.47 72.37 22 4.8 No 35 -0.73 No 0 0 No -21 0.86 Yes 42 23.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59824202 - NM_032043 BRIP1 0 . . . 5.55 83.66 26 4.71 No 8 0.26 No 0 0 No -23 0.79 Yes 42 21.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69104675 + NM_133509 RAD51B 0 . . . 8.21 77.1 19 5.83 Yes 39 1.47 Yes 0 0 No -27 0.8 Yes 31 88.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68455352 + NM_133509 RAD51B 0 . . . 7.05 80.55 17 3.83 No 54 0.96 Yes 0 0 No -53 0.15 No 38 58.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190687520 + NM_000534 PMS1 0 . . . 3.81 68.08 18 4.9 No 66 -3.17 No 0 0 No -32 0.49 No 35 41.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190702409 + NM_000534 PMS1 0 . . . 3.01 0 25 7.42 Yes 50 -3.2 No 0 0 No -24 0.87 Yes 53 44.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885330 - NM_032043 BRIP1 0 . . . 4.59 72.9 23 5.74 Yes 14 0.44 No 0 0 No -31 0.55 No 44 88.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68795077 + NM_133509 RAD51B 0 . . . 0.21 0 16 6.21 Yes 53 1.79 Yes 0 0 No -20 0.69 Yes 39 59.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94199006 - NM_005591 MRE11 0 . . . 4.59 71.58 30 4.98 No 45 0.26 No 0 0 No -29 0.75 Yes 40 72.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94176384 - NM_005591 MRE11 0 . . . 1.02 0 47 6.28 Yes 49 -1.5 No 0 0 No -43 0.46 No 51 57.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108170205 + NM_000051 ATM 0 . . . 4.32 85.02 18 5.39 No 3 1.16 Yes 30 0.41 Yes -22 0.59 No 44 49.27 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 47686500 + NM_000251 MSH2 0 . . . 0.45 0 17 5.66 Yes 28 0.02 No 0 0 No -23 0.76 Yes 42 78.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41220524 - NM_007294 BRCA1 0 . . . 4.38 78.82 25 5.28 No 70 0.87 Yes 0 0 No -23 0.42 No 39 60.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68508156 + NM_133509 RAD51B 0 . . . 2.84 68.95 27 7.14 Yes 28 0.72 No 0 0 No -26 0.79 Yes 47 50.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68599453 + NM_133509 RAD51B 0 . . . 8.54 87.59 17 4.8 No 36 0.88 Yes 0 0 No -16 0.39 No 38 92.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68862868 + NM_004360 CDH1 0 . . . 1.73 69.57 17 5.44 No 67 -3.58 No 0 0 No -25 0.83 Yes 48 65.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68625801 + NM_133509 RAD51B 0 . . . 2.31 69.98 51 6.49 Yes 1 0.54 No 0 0 No -22 0.39 No 22 35.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21994759 - NM_000077 CDKN2A 0 . . . 2.3 0 23 4.9 No 36 -3.6 No 0 0 No -22 0.85 Yes 47 34.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131980672 + NM_005732 RAD50 0 . . . 3.09 82.05 16 5.56 Yes 32 1.13 Yes 0 0 No -26 0.54 No 26 32.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59824345 - NM_032043 BRIP1 0 . . . 1.24 65.02 15 5.2 No 65 0.77 No 0 0 No -52 0.47 No 37 76.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69132439 + NM_133509 RAD51B 0 . . . 1.98 54.83 15 4.47 No 62 -3.34 No 0 0 No -6 0.38 No 46 41.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68559533 + NM_133509 RAD51B 0 . . . 5.31 89.99 26 5.57 Yes 65 -0.87 No 0 0 No -25 0.67 Yes 53 62.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68909419 + NM_133509 RAD51B 0 . . . 2.89 68.34 36 7.07 Yes 13 0.97 Yes 0 0 No -35 0.86 Yes 45 56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7580000 - NM_000546 TP53 0 . . . 8.42 95.19 63 6.98 Yes 75 0.15 No 0 0 No -22 0.52 No 27 85.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89695392 + NM_000314 PTEN 0 . . . 6.51 79.52 19 5 No 16 0.9 Yes 0 0 No -28 0.9 Yes 42 91.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68867003 + NM_133509 RAD51B 0 . . . 4.29 78.85 21 6.08 Yes 0 -1.02 No 0 0 No -20 0.56 No 48 62.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131929412 + NM_005732 RAD50 0 . . . 0.59 0 31 6.93 Yes 47 0.63 No 0 0 No -26 0.85 Yes 51 51.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7592632 - NM_000546 TP53 0 . . . 6.06 84.8 29 5.09 No 24 0.64 No 0 0 No -28 0.76 Yes 34 71.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59864524 - NM_032043 BRIP1 0 . . . 5.11 78.07 21 5.2 No 13 0.08 No 0 0 No -42 0.6 No 45 42.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68827605 + NM_133509 RAD51B 0 . . . 1.24 74.18 34 6.48 Yes -2 0.3 No 0 0 No -33 0.9 Yes 40 45.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37066889 + NM_000249 MLH1 0 . . . 6.04 77.52 38 6.32 Yes 4 1.64 Yes 0 0 No -37 0.59 No 48 67.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215666373 - NM_000465 BARD1 0 . . . 3.68 79.75 17 6.86 Yes 28 0.29 No 0 0 No -16 0.82 Yes 52 68.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68773458 + NM_133509 RAD51B 0 . . . 2.26 78.94 20 7.14 Yes 5 1.22 Yes 0 0 No -19 0.83 Yes 49 68.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48029896 + NM_000179 MSH6 0 . . . 6.81 78.76 18 4.69 No 52 1.06 Yes 0 0 No -17 0.65 No 41 66.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89677054 + NM_000314 PTEN 0 . . . 2.77 0 43 6.54 Yes 28 0.28 No 0 0 No -36 0.51 No 30 73.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68315253 + NM_133509 RAD51B 0 . . . 9.81 85.99 22 5.74 Yes 10 0.83 Yes 0 0 No -21 0.78 Yes 48 91.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108144843 + NM_000051 ATM 0 . . . 3.16 80.33 14 5.66 Yes 72 0.64 No 0 0 No -43 0.45 No 46 70.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32932193 + NM_000059 BRCA2 0 . . . 3.87 75.27 27 5.74 Yes 69 1.65 Yes 0 0 No -26 0.95 Yes 42 43.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68449793 + NM_133509 RAD51B 0 . . . 9.44 81.29 20 5.66 Yes 23 0.54 No 0 0 No -57 0.62 No 49 34.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68323360 + NM_133509 RAD51B 0 . . . 1.76 68.29 26 5.82 Yes 55 0.32 No 0 0 No -28 0.67 Yes 46 50.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37084237 + NM_000249 MLH1 0 . . . 0.59 74.68 15 4.56 No 64 1.11 Yes 0 0 No -18 0.35 No 36 50.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7564101 - NM_000546 TP53 0 . . . 6.69 88.44 14 5.55 No 48 0.44 No 0 0 No -19 0.56 No 10 53.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68355968 + NM_133509 RAD51B 0 . . . 5.49 78.63 21 5.1 No 59 0.75 No 0 0 No -20 0.7 Yes 42 69.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47791186 + NM_000251 MSH2 0 . . . 8.93 82.5 19 5.38 No 8 1.38 Yes 0 0 No -18 0.42 No 33 67.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94212475 - NM_005591 MRE11 0 . . . 5.09 59.99 28 4.72 No 52 0.69 No 0 0 No -28 0.41 No 45 73.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68686185 + NM_133509 RAD51B 0 . . . 2.28 75.67 22 5.74 Yes 28 0.7 No 0 0 No -21 0.86 Yes 44 59.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215637672 - NM_000465 BARD1 0 . . . 3.07 70.95 24 5.4 No 42 -2.09 No 0 0 No -23 0.93 Yes 42 80.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23634021 - NM_024675 PALB2 0 . . . 4.65 68.33 18 4.12 No 45 0.37 No 0 0 No -41 0.49 No 34 65.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68824513 + NM_004360 CDH1 0 . . . 3.85 0 17 5.64 Yes 58 0.51 No 0 0 No -29 0.32 No 45 38.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94165126 - NM_005591 MRE11 0 . . . 7.6 95.65 26 6.04 Yes 70 1.09 Yes 0 0 No -25 0.89 Yes 45 64.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33428156 - NM_002878 RAD51D 0 . . . 7.8 83.59 24 5.39 No 49 -2.38 No 0 0 No -23 0.56 No 48 79.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68300691 + NM_133509 RAD51B 0 . . . 4.8 73.13 36 5.91 Yes 75 1.61 Yes 0 0 No -35 0.48 No 31 65.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59934918 - NM_032043 BRIP1 0 . . . 2.24 80.12 24 4.79 No 7 1.16 Yes 0 0 No -17 0.45 No 51 81.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108210018 + NM_000051 ATM 0 . . . 0.86 54.5 24 6.97 Yes 73 -2.78 No 0 0 No -23 0.78 Yes 54 70.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105183338 + NM_021930 RINT1 0 . . . 1.06 68.2 27 5.29 No -2 0.18 No 0 0 No -26 0.57 No 46 86.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215641854 - NM_000465 BARD1 0 . . . 0.7 69.38 15 3.68 No 16 0.44 No 0 0 No -34 0.89 Yes 50 54.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68821603 + NM_133509 RAD51B 0 . . . 0.15 0 12 4.24 No 9 0.72 No 0 0 No -17 0.23 No 49 83.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59835846 - NM_032043 BRIP1 0 . . . 1.15 0 21 4.58 No 68 0.44 No 0 0 No -23 0.65 No 31 38.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68926798 + NM_133509 RAD51B 0 . . . 4.96 70.18 55 7.35 Yes 27 1.2 Yes 0 0 No -36 0.78 Yes 45 72.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47697653 + NM_000251 MSH2 0 . . . 3.6 85.02 16 5.17 No 4 1.2 Yes 0 0 No -22 0.46 No 43 48.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59900246 - NM_032043 BRIP1 0 . . . 0.3 60.47 20 5.07 No 31 0.94 Yes 0 0 No -23 0.76 Yes 40 70.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68345547 + NM_133509 RAD51B 0 . . . 1.4 0 15 4.37 No 39 1.41 Yes 0 0 No -22 0.39 No 52 55.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84395790 - NM_139076 FAM175A 0 . . . 6.82 88.68 16 4.69 No 9 1.13 Yes 0 0 No -41 0.59 No 49 94.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90963295 - NM_002485 NBN 0 . . . 2.62 68.34 19 4.01 No 21 1.7 Yes 0 0 No -26 0.53 No 37 66.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6032217 - NM_000535 PMS2 0 . . . 1.4 74.47 25 5.39 No 72 -4.86 No 0 0 No -24 0.84 Yes 54 75.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69092640 + NM_133509 RAD51B 0 . . . 0.15 0 21 4.2 No -1 0.33 No 0 0 No -24 0.69 Yes 26 82.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68848442 + NM_133509 RAD51B 0 . . . 4.48 82.69 29 4.83 No -4 -1.8 No 0 0 No -28 0.64 No 49 54.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68758658 + NM_133509 RAD51B 0 . . . 0.89 0 30 9.1 Yes 50 0.56 No 0 0 No -29 0.65 No 45 77.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59824550 - NM_032043 BRIP1 0 . . . 3.99 77.14 16 5.91 Yes 2 0.53 No 0 0 No -21 0.47 No 47 62.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89661549 + NM_000314 PTEN 0 . . . 4.14 72.91 34 5.32 No 19 1.59 Yes 0 0 No -26 0.53 No 39 91.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108115380 + NM_000051 ATM 0 . . . 6.18 73.06 23 4.82 No 38 0.98 Yes 0 0 No -22 0.51 No 41 82.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94191692 - NM_005591 MRE11 0 . . . 2.8 0 12 5.83 Yes 11 0.72 No 0 0 No -60 0.69 Yes 51 95.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190699640 + NM_000534 PMS1 0 . . . 6.88 85.67 25 5.2 No 7 1.22 Yes 0 0 No -29 0.51 No 43 46.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68661962 + NM_133509 RAD51B 0 . . . 5.3 77.67 14 3.93 No 12 1.34 Yes 0 0 No -23 0.37 No 38 81.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68924928 + NM_133509 RAD51B 0 . . . 4.66 81.28 25 5.74 Yes 50 0.64 No 0 0 No -24 0.67 Yes 44 39.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68416733 + NM_133509 RAD51B 0 . . . 9.43 83.07 21 4.99 No 15 0.14 No 0 0 No -42 0.84 Yes 43 91.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108181401 + NM_000051 ATM 0 . . . 0.59 0 27 6.36 Yes -1 0.77 Yes 0 0 No -26 0.42 No 38 32.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47633098 + NM_000251 MSH2 0 . . . 4.34 90.67 27 3.89 No 20 0.22 No 0 0 No -26 0.64 No 47 56.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47793772 + NM_000251 MSH2 0 . . . 6.62 79.24 29 6.93 Yes 8 0.83 Yes 0 0 No -28 0.73 Yes 34 76.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37082737 + NM_000249 MLH1 0 . . . 2.55 80.02 35 7.2 Yes 52 0.77 Yes 0 0 No -34 0.46 No 48 89.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131971245 + NM_005732 RAD50 0 . . . 6.26 82.93 27 6.16 Yes 25 1.17 Yes 0 0 No -26 0.41 No 33 80.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89655955 + NM_000314 PTEN 0 . . . 6.88 83.07 28 5.69 Yes 12 1.29 Yes 0 0 No -27 0.93 Yes 43 75.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84408098 - NM_139076 FAM175A 0 . . . 0.56 0 27 5.2 No 55 1.76 Yes 0 0 No -47 0.49 No 45 30.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68792479 + NM_133509 RAD51B 0 . . . 1.61 71.28 38 7.03 Yes 1 1.02 Yes 0 0 No -23 0.8 Yes 46 52.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68469197 + NM_133509 RAD51B 0 . . . 4.98 73.28 21 5.05 No 72 0.34 No 0 0 No -26 0.51 No 41 81.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47663339 + NM_000251 MSH2 0 . . . 0.42 74.73 48 6.69 Yes 34 1.15 Yes 0 0 No -27 0.83 Yes 24 61.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68462517 + NM_133509 RAD51B 0 . . . 5.2 85.02 20 6.71 Yes 5 1.23 Yes 0 0 No -25 0.86 Yes 53 81.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68737806 + NM_133509 RAD51B 0 . . . 3.76 69.24 60 7.64 Yes 70 1.87 Yes 0 0 No -23 0.28 No 41 53.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68467964 + NM_133509 RAD51B 0 . . . 0.59 71.75 17 4.39 No 37 -2.21 No 0 0 No -26 0.22 No 38 74.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21971857 - NM_000077 CDKN2A 0 . . . 0.05 62.83 19 5.33 No 31 0.15 No 0 0 No -18 0.45 No 48 59.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108117323 + NM_000051 ATM 0 . . . 4.73 75.29 20 5 No 58 0.7 No 0 0 No -26 0.73 Yes 46 60.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69055764 + NM_133509 RAD51B 0 . . . 0.9 72.58 31 8.46 Yes 18 0.95 Yes 0 0 No -31 0.73 Yes 59 65.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89731041 + NM_000314 PTEN 0 . . . 0.97 66.35 18 4.59 No 9 0.99 Yes 0 0 No -26 0.79 Yes 49 86.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59841522 - NM_032043 BRIP1 0 . . . 1.99 65.78 39 5.99 Yes 2 1.04 Yes 0 0 No -25 0.97 Yes 49 60.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47734898 + NM_000251 MSH2 0 . . . 0.82 73.66 28 5.62 Yes 5 0.58 No 0 0 No -32 0.38 No 53 42.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1210276 + NM_000455 STK11 0 . . . 0.03 0 21 7.42 Yes 51 -0.9 No 0 0 No -20 0.65 No 56 19.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89726810 + NM_000314 PTEN 0 . . . 0.05 65.87 15 5.82 Yes 38 -3.65 No 0 0 No -20 0.25 No 20 68.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68791438 + NM_133509 RAD51B 0 . . . 5.33 67.94 19 5.83 Yes 34 1.27 Yes 0 0 No -24 0.79 Yes 35 93.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89687874 + NM_000314 PTEN 0 . . . 0.59 75.12 31 5.44 No 8 0.35 No 0 0 No -25 0.57 No 50 83.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108143356 + NM_000051 ATM 0 . . . 5.49 80.22 30 6.37 Yes 24 0.43 No 0 0 No -29 0.62 No 46 89.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68843536 + NM_133509 RAD51B 0 . . . 3.84 84.2 15 7.15 Yes 70 -2.41 No 0 0 No -37 0.51 No 53 44.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68979237 + NM_133509 RAD51B 0 . . . 6.3 81.94 42 10.4 Yes 52 0.96 Yes 0 0 No -23 0.48 No 37 57.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68758414 + NM_133509 RAD51B 0 . . . 2.32 66.21 15 3.22 No 16 0.61 No 0 0 No -15 0.27 No 42 86.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84397462 - NM_139076 FAM175A 0 . . . 1.55 70.1 18 4.9 No 57 0.96 Yes 0 0 No -42 0.66 No 42 35.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68922640 + NM_133509 RAD51B 0 . . . 1.22 66.45 17 7.77 Yes 70 -5.48 No 0 0 No -21 0.63 No 43 40.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68672703 + NM_133509 RAD51B 0 . . . 3.13 0 22 4.06 No 49 1.24 Yes 0 0 No -25 0.53 No 53 57.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68762577 + NM_133509 RAD51B 0 . . . 4.99 79.15 33 6.12 Yes 59 1.13 Yes 0 0 No -32 0.33 No 52 78.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152371927 - NM_005431 XRCC2 0 . . . 3.07 76.32 16 4.12 No 4 0.8 Yes 0 0 No -30 0.35 No 51 56.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68991274 + NM_133509 RAD51B 0 . . . 4.51 80.47 29 5.98 Yes 33 -2.03 No 0 0 No -28 0.82 Yes 54 40.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52436560 - NM_004656 BAP1 0 . . . 4.42 79.16 25 4.82 No 22 0.72 No 0 0 No -24 0.61 No 53 83.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59857150 - NM_032043 BRIP1 0 . . . 5.1 86.29 44 7.55 Yes 8 1.26 Yes 0 0 No -36 0.66 No 50 91.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32924325 + NM_000059 BRCA2 0 . . . 5.46 72.9 27 4.91 No 6 0.28 No 0 0 No -26 0.86 Yes 59 28.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68388658 + NM_133509 RAD51B 0 . . . 6.06 74.28 16 5.04 No 52 0.18 No 0 0 No -20 0.67 Yes 43 58.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68683805 + NM_133509 RAD51B 0 . . . 2.51 0 25 4.95 No 6 0.99 Yes 0 0 No -22 0.75 Yes 28 77.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68854307 + NM_133509 RAD51B 0 . . . 4.34 74.06 16 4.92 No 35 0.71 No 0 0 No -20 0.83 Yes 23 89.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94210152 - NM_005591 MRE11 0 . . . 2.49 77.35 23 7.02 Yes 48 1.38 Yes 0 0 No -22 0.65 No 52 71.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21989453 - NM_000077 CDKN2A 0 . . . 0.52 0 28 5.74 Yes 46 0.86 Yes 0 0 No -27 0.73 Yes 43 44.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90989169 - NM_002485 NBN 0 . . . 2.84 64.31 15 4.58 No 66 0.83 Yes 0 0 No -57 0.53 No 45 34.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68426008 + NM_133509 RAD51B 0 . . . 3.75 84.95 15 5.2 No 45 1.13 Yes 0 0 No -56 0.52 No 13 60.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104179891 - NM_001100119 XRCC3 0 . . . 4.73 78.73 26 5.38 No 10 1.68 Yes 0 0 No -26 0.51 No 48 71.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131966837 + NM_005732 RAD50 0 . . . 1.94 0 26 5.29 No 17 1.7 Yes 0 0 No -25 0.77 Yes 41 97.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41243296 - NM_007294 BRCA1 0 . . . 4.1 75.84 28 5.38 No 3 0.54 No 0 0 No -27 0.8 Yes 32 66.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131974262 + NM_005732 RAD50 0 . . . 3.92 81.06 16 3.75 No 32 0.49 No 0 0 No -18 0.57 No 44 39.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47742228 + NM_000251 MSH2 0 . . . 2.43 87.88 25 4.61 No 74 -4.38 No 0 0 No -28 0.69 Yes 50 91.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59857753 - NM_032043 BRIP1 0 . . . 4.86 0 31 4.13 No 15 1.48 Yes 0 0 No -30 0.81 Yes 38 82.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1219359 + NM_000455 STK11 0 . . . 7.01 81.68 30 5.28 No 49 1.28 Yes 0 0 No -27 0.28 No 43 89.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32952029 + NM_000059 BRCA2 0 . . . 5.63 70.51 28 5.48 No 48 0.6 No 0 0 No -23 0.56 No 49 66.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68957734 + NM_133509 RAD51B 0 . . . 4.7 87.07 29 5.72 Yes 4 0.01 No 0 0 No -28 0.94 Yes 42 60.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89704099 + NM_000314 PTEN 0 . . . 4.3 76.14 22 4.8 No 70 -3.36 No 0 0 No -18 0.37 No 50 57.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108164858 + NM_000051 ATM 0 . . . 0.41 0 18 3.42 No 39 0.2 No 0 0 No -17 0.47 No 56 24.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59762590 - NM_032043 BRIP1 0 . . . 0.69 71.23 18 6.43 Yes 66 -2.99 No 0 0 No -22 0.23 No 37 45.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274680 - NM_007294 BRCA1 0 . . . 7.58 80.53 26 5.39 No 23 1.66 Yes 0 0 No -25 0.74 Yes 45 70.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23630533 - NM_024675 PALB2 0 . . . 3.06 78.11 38 6.08 Yes 0 -2.05 No 0 0 No -30 0.62 No 46 95.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41025160 + NM_001164269 RAD51 0 . . . 0.08 83.21 25 5.29 No 37 1.54 Yes 0 0 No -24 0.75 Yes 31 52.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68308322 + NM_133509 RAD51B 0 . . . 0.82 58.7 20 7.14 Yes 8 0.25 No 0 0 No -19 0.83 Yes 39 46.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23643137 - NM_024675 PALB2 0 . . . 5.06 81.72 12 5.49 No 9 0.6 No 0 0 No -33 0.35 No 45 77.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89708383 + NM_000314 PTEN 0 . . . 2.11 69.72 29 6.78 Yes 45 -4.5 No 0 0 No -28 0.67 Yes 46 41.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108169564 + NM_000051 ATM 0 . . . 0.86 56.16 29 5.92 Yes 2 0.02 No 0 0 No -28 0.74 Yes 56 61.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69033946 + NM_133509 RAD51B 0 . . . 0.85 70.59 28 4.17 No 66 -5.41 No 0 0 No -27 0.55 No 59 27.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41255960 - NM_007294 BRCA1 0 . . . 3.6 85.02 39 5.58 Yes 4 1.2 Yes 0 0 No -22 0.5 No 54 59.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6038157 - NM_000535 PMS2 0 . . . 3.25 80.12 28 5.38 No 8 1.06 Yes 0 0 No -28 0.48 No 50 88.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68536944 + NM_133509 RAD51B 0 . . . 9.06 81.67 33 4.56 No 66 0.28 No 0 0 No -29 0.69 Yes 47 54.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68647237 + NM_133509 RAD51B 0 . . . 5.13 88.41 26 5.1 No 8 0.6 No 0 0 No -25 0.7 Yes 50 54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47735912 + NM_000251 MSH2 0 . . . 4.43 76.76 26 5.29 No 50 -0.28 No 0 0 No -25 0.52 No 45 79.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68340909 + NM_133509 RAD51B 0 . . . 2.25 0 21 6.44 Yes 73 -5.11 No 0 0 No -27 0.63 No 49 58.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108173444 + NM_000051 ATM 0 . . . 6.93 82.55 15 4.56 No 68 0.92 Yes 0 0 No -26 0.44 No 45 50.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59763308 - NM_032043 BRIP1 0 . . . 1.69 81.97 38 5.89 Yes 26 1.37 Yes 0 0 No -31 0.62 No 50 47.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59786221 - NM_032043 BRIP1 0 . . . 1.62 67.97 18 4.36 No 12 1 Yes 0 0 No -22 0.67 Yes 46 80.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32917450 + NM_000059 BRCA2 0 . . . 1.76 76.65 17 6.33 Yes 40 0.39 No 0 0 No -22 0.79 Yes 45 48.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68370322 + NM_133509 RAD51B 0 . . . 5.32 72.65 22 4.99 No 58 0.06 No 0 0 No -24 0.46 No 45 95.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131942627 + NM_005732 RAD50 0 . . . 2.14 69.64 28 5.09 No 76 -4.52 No 0 0 No -28 0.77 Yes 49 53.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47687765 + NM_000251 MSH2 0 . . . 4.25 86.43 22 5.71 Yes 21 0.9 Yes 0 0 No -21 0.59 No 34 69.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47775563 + NM_000251 MSH2 0 . . . 6.51 78.91 17 4.8 No 6 0.71 No 0 0 No -41 0.84 Yes 44 55.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131900071 + NM_005732 RAD50 0 . . . 4.35 69.15 20 5.09 No 12 0.2 No 0 0 No -19 0.86 Yes 46 57.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68959305 + NM_133509 RAD51B 0 . . . 2.17 64.39 23 4.82 No 14 1.88 Yes 0 0 No -22 0.69 Yes 44 90.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37092637 + NM_000249 MLH1 0 . . . 0.97 65.76 22 6.68 Yes 16 1.05 Yes 0 0 No -21 0.52 No 42 86.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68753564 + NM_133509 RAD51B 0 . . . 1.28 65.42 21 5.97 Yes 48 -4.03 No 0 0 No -19 0.51 No 41 29.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69046402 + NM_133509 RAD51B 0 . . . 3.44 61.02 34 6.09 Yes 61 0.34 No 0 0 No -33 0.78 Yes 47 47.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84405287 - NM_139076 FAM175A 0 . . . 2.24 77.35 18 4.96 No 54 1.01 Yes 0 0 No -23 0.78 Yes 54 69.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68383581 + NM_133509 RAD51B 0 . . . 1.86 0 18 5.74 Yes 9 0.99 Yes 0 0 No -17 0.69 Yes 49 76.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23646381 - NM_024675 PALB2 0 . . . 1.2 65.31 56 8.2 Yes 22 0.82 Yes 0 0 No -32 0.28 No 40 58.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32962440 + NM_000059 BRCA2 0 . . . 6.3 79.93 13 4.36 No 7 1.18 Yes 0 0 No -46 0.96 Yes 51 79.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94197359 - NM_005591 MRE11 0 . . . 5.87 80.1 22 5.29 No 57 0.55 No 0 0 No -34 0.46 No 46 49.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29084570 - NM_001005735 CHEK2 0 . . . 3.26 70.07 18 7 Yes 19 0.98 Yes 0 0 No -17 0.53 No 39 91.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47711595 + NM_000251 MSH2 0 . . . 2.52 79.01 23 4.76 No 16 0.09 No 0 0 No -22 0.75 Yes 42 92.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69114069 + NM_133509 RAD51B 0 . . . 7.22 84.86 12 5.2 No 10 0.94 Yes 0 0 No -28 0.56 No 48 70.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59929862 - NM_032043 BRIP1 0 . . . 2.99 80.12 28 7.07 Yes 7 1.14 Yes 0 0 No -27 0.76 Yes 51 70.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215663924 - NM_000465 BARD1 0 . . . 1.84 86.33 19 4.8 No 33 1.29 Yes 0 0 No -18 0.88 Yes 50 79.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68308060 + NM_133509 RAD51B 0 . . . 3.99 65.64 27 5.74 Yes 42 0.65 No 0 0 No -26 0.75 Yes 49 58.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56784288 + NM_058216 RAD51C 0 . . . 4.66 85.04 18 5.24 No 35 0.56 No 0 0 No -25 0.7 Yes 49 56.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23637360 - NM_024675 PALB2 0 . . . 5.38 69.48 20 5.66 Yes 53 -4.44 No 0 0 No -19 0.53 No 45 78.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47786659 + NM_000251 MSH2 0 . . . 4.2 76.87 20 4.73 No 62 1.02 Yes 0 0 No -24 0.87 Yes 46 48.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89719157 + NM_000314 PTEN 0 . . . 2.02 68.42 18 4.9 No 71 1.25 Yes 0 0 No -24 0.45 No 37 67.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68492824 + NM_133509 RAD51B 0 . . . 5.13 83.68 18 4.9 No 0 0.79 Yes 0 0 No -22 0.74 Yes 29 49.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89705681 + NM_000314 PTEN 0 . . . 7.17 94.43 13 5.35 No 64 -4.5 No 0 0 No -22 0.58 No 46 46.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152371533 - NM_005431 XRCC2 0 . . . 4.2 85.02 35 6.33 Yes 4 1.65 Yes 0 0 No -34 0.6 No 54 68.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108226150 + NM_000051 ATM 0 . . . 0.02 68.92 33 5.73 Yes 67 0.39 No 0 0 No -32 0.68 Yes 56 28.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90972431 - NM_002485 NBN 0 . . . 4.62 68.58 25 5.38 No 61 -4.92 No 0 0 No -22 0.86 Yes 50 82.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108207640 + NM_000051 ATM 0 . . . 6.03 84.43 27 5.97 Yes 75 1.16 Yes 0 0 No -30 0.59 No 45 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108237833 + NM_000051 ATM 0 . . . 0.78 84.22 45 6.41 Yes 29 1.26 Yes 0 0 No -30 0.85 Yes 25 55.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41241997 - NM_007294 BRCA1 0 . . . 5.61 84.79 59 8.06 Yes 2 1.08 Yes 0 0 No -38 0.29 No 42 83.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108133147 + NM_000051 ATM 0 . . . 1.86 74.66 31 5.65 Yes 41 0.22 No 0 0 No -31 0.48 No 46 78.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68598868 + NM_133509 RAD51B 0 . . . 2.04 0 16 7.29 Yes 64 0.55 No 0 0 No -22 0.5 No 36 61.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68770368 + NM_004360 CDH1 0 . . . 1.3 63.8 9 5.1 No 45 0.57 No 0 0 No -26 0.78 Yes 43 48.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52435530 - NM_004656 BAP1 0 . . . 6.07 85.84 28 5.52 No 63 0.84 Yes 0 0 No -34 0.44 No 52 52.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68351288 + NM_133509 RAD51B 0 . . . 7.95 77.48 22 5.19 No 63 1.53 Yes 0 0 No -22 0.41 No 36 80.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48007971 + NM_000179 MSH6 0 . . . 1.43 77.38 32 5.57 Yes 67 -4.96 No 0 0 No -26 0.55 No 47 42.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59872402 - NM_032043 BRIP1 0 . . . 1.28 66.08 20 5.06 No 46 0.04 No 0 0 No -22 0.52 No 43 34.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47749644 + NM_000251 MSH2 0 . . . 5.09 69.6 24 5.1 No 58 1.15 Yes 0 0 No -23 0.85 Yes 40 47.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69033465 + NM_133509 RAD51B 0 . . . 5.23 80.36 11 3.96 No 2 0.69 No 0 0 No -31 0.62 No 37 93.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68840874 + NM_133509 RAD51B 0 . . . 4.45 81.45 17 5.57 Yes 73 -5.08 No 0 0 No -16 0.73 Yes 49 66.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68807769 + NM_133509 RAD51B 0 . . . 3.98 82.12 14 5 No 56 1.44 Yes 0 0 No -18 0.61 No 49 58.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89712294 + NM_000314 PTEN 0 . . . 3.02 67.25 28 6.45 Yes 20 -2.99 No 0 0 No -27 0.95 Yes 17 60.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21978254 - NM_000077 CDKN2A 0 . . . 4.12 75.42 34 5.22 No 24 0.55 No 0 0 No -24 0.55 No 29 77.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69055533 + NM_133509 RAD51B 0 . . . 6.03 88.22 25 5.52 No 32 1.56 Yes 0 0 No -22 0.46 No 26 89.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56807891 + NM_058216 RAD51C 0 . . . 2.55 76.51 27 5.33 No 40 0.44 No 0 0 No -27 0.83 Yes 49 92.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37081344 + NM_000249 MLH1 0 . . . 0.02 68.58 29 4.19 No 17 0.8 Yes 0 0 No -28 0.42 No 38 66.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1213204 + NM_000455 STK11 0 . . . 2.18 73.32 30 5.91 Yes 31 1.22 Yes 0 0 No -29 0.86 Yes 27 77.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94214866 - NM_005591 MRE11 0 . . . 2.52 69.52 22 5.25 No 70 -5.45 No 0 0 No -21 0.4 No 52 30.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68370641 + NM_133509 RAD51B 0 . . . 0.59 70.56 35 5.4 No 67 -2.56 No 0 0 No -31 0.71 Yes 33 78.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68784726 + NM_004360 CDH1 0 . . . 0.63 80.65 40 6.24 Yes 33 1.3 Yes 0 0 No -34 0.7 Yes 50 75.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68289898 + NM_133509 RAD51B 0 . . . 0.25 65.63 24 4.62 No 58 -2.48 No 0 0 No -23 0.59 No 39 75.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68772882 + NM_133509 RAD51B 0 . . . 2.87 62.67 23 5.39 No 39 0.77 No 0 0 No -22 0.8 Yes 40 83.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68863943 + NM_133509 RAD51B 0 . . . 4.5 81.41 32 5.59 Yes 17 0.47 No 0 0 No -31 0.34 No 41 73.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75504297 - NM_001040108 MLH3 0 . . . 5.22 73.59 17 5.57 Yes 30 0.92 Yes 0 0 No -24 0.64 No 36 47.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47761570 + NM_000251 MSH2 0 . . . 2.74 0 27 4.78 No 15 0.83 Yes 0 0 No -26 0.73 Yes 47 67.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68578294 + NM_133509 RAD51B 0 . . . 0.21 77.59 31 6.08 Yes 8 1.08 Yes 0 0 No -31 0.61 No 50 88.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68419502 + NM_133509 RAD51B 0 . . . 2.39 83.39 19 5.92 Yes -2 0.15 No 0 0 No -18 0.56 No 49 56.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29106324 - NM_001005735 CHEK2 0 . . . 1.85 65.58 18 4.9 No 12 0.8 Yes 0 0 No -28 0.5 No 46 85.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68827918 + NM_133509 RAD51B 0 . . . 4.07 70.66 75 8.53 Yes 9 0.36 No 0 0 No -16 0.48 No 49 83.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21983289 - NM_000077 CDKN2A 0 . . . 5.27 67 28 5.38 No 13 0.43 No 0 0 No -27 0.42 No 45 87.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105196886 + NM_021930 RINT1 0 . . . 2.08 76.06 26 6.23 Yes 60 1.34 Yes 0 0 No -25 0.91 Yes 30 58.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41209442 - NM_007294 BRCA1 0 . . . 3.94 68.39 19 4.98 No 18 1.02 Yes 0 0 No -26 0.5 No 40 85.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105181548 + NM_021930 RINT1 0 . . . 2.95 70.85 21 4.45 No 21 1.71 Yes 0 0 No -31 0.72 Yes 37 73.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32937526 + NM_000059 BRCA2 0 . . . 0.64 70.39 35 5.68 Yes 71 -4.57 No 0 0 No -34 0.55 No 46 95.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89646105 + NM_000314 PTEN 0 . . . 5.45 77.29 26 4.81 No 12 1.04 Yes 0 0 No -25 0.6 No 46 88.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108218606 + NM_000051 ATM 0 . . . 2.6 76.3 31 4.98 No 17 0.56 No 0 0 No -30 0.95 Yes 48 57.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89678724 + NM_000314 PTEN 0 . . . 7.04 80.58 26 4.99 No 36 1.22 Yes 0 0 No -25 0.6 No 28 64.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59928044 - NM_032043 BRIP1 0 . . . 1.24 64.61 24 5.38 No 41 1.37 Yes 0 0 No -23 0.9 Yes 48 44.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131905033 + NM_005732 RAD50 0 . . . 1.65 72.18 12 5.48 No 56 0.71 No 0 0 No -23 0.47 No 51 49.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41008376 + NM_001164269 RAD51 0 . . . 4.42 78.29 22 5.2 No 16 0.71 No 0 0 No -28 0.78 Yes 42 70.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215625853 - NM_000465 BARD1 0 . . . 0.39 68.2 19 4.82 No 72 0.72 No 0 0 No -23 0.82 Yes 51 40.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68691811 + NM_133509 RAD51B 0 . . . 1.01 0 23 5.38 No 24 -3.46 No 0 0 No -22 0.79 Yes 51 38.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131896861 + NM_005732 RAD50 0 . . . 3.05 68.94 49 7.1 Yes 22 0.77 Yes 0 0 No -20 0.43 No 36 97.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23648857 - NM_024675 PALB2 0 . . . 1.63 79.69 22 5.61 Yes 7 0.91 Yes 0 0 No -21 0.72 Yes 47 69.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68410878 + NM_133509 RAD51B 0 . . . 0.24 73.06 12 3.38 No 11 0.55 No 0 0 No -15 0.22 No 47 79.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68691048 + NM_133509 RAD51B 0 . . . 1.46 76.39 11 4.12 No 60 -3.42 No 0 0 No -22 0.54 No 45 66.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41018383 + NM_001164269 RAD51 0 . . . 2.38 77.89 18 4.43 No 14 1.02 Yes 0 0 No -23 0.61 No 44 81.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68668538 + NM_133509 RAD51B 0 . . . 0 71.08 33 6.08 Yes 1 1.79 Yes 0 0 No -32 0.38 No 50 54.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215622216 - NM_000465 BARD1 0 . . . 0.24 74.5 15 5.38 No 28 0.55 No 0 0 No -27 0.78 Yes 30 67.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89668888 + NM_000314 PTEN 0 . . . 5.98 66.5 23 4.72 No 17 0.07 No 0 0 No -27 0.49 No 41 77.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108181579 + NM_000051 ATM 0 . . . 0.76 0 29 7.87 Yes 74 1.14 Yes 0 0 No -29 0.45 No 35 50.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68289493 + NM_133509 RAD51B 0 . . . 2.93 85.45 19 4.8 No 62 0.87 Yes 0 0 No -41 0.51 No 46 76.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68342238 + NM_133509 RAD51B 0 . . . 2.15 0 30 5.39 No 15 0.66 No 0 0 No -29 0.48 No 34 45.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29125468 - NM_001005735 CHEK2 0 . . . 6.39 85.25 15 4.15 No 5 -0.5 No 0 0 No -26 0.33 No 44 68.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68647724 + NM_133509 RAD51B 0 . . . 5.89 82.39 28 5.83 Yes 50 -2.47 No 0 0 No -27 0.85 Yes 51 60.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68788946 + NM_004360 CDH1 0 . . . 1.46 64.39 24 6.4 Yes -4 0.34 No 0 0 No -23 0.79 Yes 35 69.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84387483 - NM_139076 FAM175A 0 . . . 0.04 0 47 6.4 Yes 30 0.42 No 0 0 No -22 0.76 Yes 28 66.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89719082 + NM_000314 PTEN 0 . . . 8.91 82.29 21 4.69 No -4 1.16 Yes 0 0 No -21 0.45 No 48 48.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215646907 - NM_000465 BARD1 0 . . . 5 84.74 18 4.24 No 18 0.42 No 0 0 No -17 0.41 No 40 54.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108165218 + NM_000051 ATM 0 . . . 1.16 74.09 38 7.28 Yes 4 0.41 No 0 0 No -37 0.87 Yes 54 80.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190694940 + NM_000534 PMS1 0 . . . 5.06 73.96 11 4.12 No 9 0.98 Yes 0 0 No -28 0.55 No 42 32.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90988020 - NM_002485 NBN 0 . . . 0.74 74.15 13 5.28 No 9 0.75 No 0 0 No -32 0.63 No 49 72.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68758833 + NM_133509 RAD51B 0 . . . 3.4 75.59 15 5.2 No 51 -3.9 No 0 0 No -21 0.52 No 49 53.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48026482 + NM_000179 MSH6 0 . . . 0.14 69.85 26 6 Yes 25 -2.36 No 0 0 No -26 0.83 Yes 46 54.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37052125 + NM_000249 MLH1 0 . . . 8.6 87.51 30 5.38 No 8 1.01 Yes 0 0 No -24 0.44 No 50 90.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68629038 + NM_133509 RAD51B 0 . . . 0.98 0 44 7.81 Yes -3 0.75 No 0 0 No -43 0.68 Yes 49 35.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59811785 - NM_032043 BRIP1 0 . . . 3.59 71.99 33 5.94 Yes 50 0.9 Yes 0 0 No -32 0.43 No 20 79.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68915303 + NM_133509 RAD51B 0 . . . 2.96 66.88 16 4.69 No 29 0.34 No 0 0 No -22 0.47 No 45 71.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131923520 + NM_005732 RAD50 0 . . . 2.43 66.29 15 4.58 No 76 0.65 No 0 0 No -57 0.55 No 44 50.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37040952 + NM_000249 MLH1 0 . . . 1.28 55.22 29 6.35 Yes 10 0.25 No 0 0 No -25 0.41 No 48 67.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152353744 - NM_005431 XRCC2 0 . . . 1.75 69.25 27 5.38 No 54 -5.34 No 0 0 No -22 0.65 No 28 75.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59900790 - NM_032043 BRIP1 0 . . . 9.25 84.59 25 5.57 Yes 67 1.11 Yes 0 0 No -25 0.45 No 47 64.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68896867 + NM_133509 RAD51B 0 . . . 5.74 78.04 16 5.29 No 60 0.64 No 0 0 No -18 0.39 No 43 59.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29138802 - NM_001005735 CHEK2 0 . . . 2.11 60 32 6.16 Yes 21 1.36 Yes 0 0 No -31 0.67 Yes 12 67.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68703586 + NM_133509 RAD51B 0 . . . 1.39 0 22 5.66 Yes 17 1.17 Yes 0 0 No -25 0.58 No 41 75.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6038105 - NM_000535 PMS2 0 . . . 2.36 74.5 14 5.86 Yes -4 1.36 Yes 0 0 No -31 0.58 No 54 39.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47745962 + NM_000251 MSH2 0 . . . 0.37 71.28 28 5.36 No 52 0.88 Yes 0 0 No -27 0.74 Yes 26 87.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59874950 - NM_032043 BRIP1 0 . . . 9.48 93.27 16 5.05 No 70 0.69 No 0 0 No -20 0.75 Yes 40 64.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104167771 - NM_001100119 XRCC3 0 . . . 1.38 0 32 4.21 No -3 0.41 No 0 0 No -22 0.68 Yes 61 41.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69090896 + NM_133509 RAD51B 0 . . . 1.07 67.47 68 8.75 Yes 69 0.66 No 0 0 No -29 0.61 No 48 68.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190696094 + NM_000534 PMS1 0 . . . 0.23 68.21 11 5.29 No 70 0.12 No 0 0 No -21 0.8 Yes 55 36.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45800805 - NM_001048171 MUTYH 0 . . . 0.64 68.68 24 4.79 No 76 -4.84 No 0 0 No -23 0.74 Yes 18 69.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215607282 - NM_000465 BARD1 0 . . . 6.94 78.55 27 5.48 No 7 0.76 No 0 0 No -26 0.76 Yes 41 53.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68309804 + NM_133509 RAD51B 0 . . . 10.82 93.21 15 5.08 No 35 1.18 Yes 0 0 No -25 0.46 No 47 76.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47676576 + NM_000251 MSH2 0 . . . 3.37 68.95 15 5.1 No 16 1.1 Yes 0 0 No -21 0.65 No 42 92.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108182920 + NM_000051 ATM 0 . . . 5.77 86.08 17 6.4 Yes 7 0.33 No 0 0 No -16 0.74 Yes 44 68.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68857791 + NM_004360 CDH1 0 . . . 5.83 81.95 18 4.69 No 73 -3.13 No 0 0 No -23 0.48 No 45 69.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190690403 + NM_000534 PMS1 0 . . . 2.81 70.79 19 5.61 Yes 70 1.38 Yes 0 0 No -18 0.42 No 46 79.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41266300 - NM_007294 BRCA1 0 . . . 7.51 90.77 20 7.14 Yes 63 0.56 No 0 0 No -19 0.7 Yes 45 53.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94212136 - NM_005591 MRE11 0 . . . 4.04 76.53 16 4.47 No 8 1.05 Yes 0 0 No -21 0.62 No 50 58.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190654684 + NM_000534 PMS1 0 . . . 4.64 74.94 12 4.8 No 64 1.05 Yes 0 0 No -22 0.67 Yes 51 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23614628 - NM_024675 PALB2 0 . . . 1.64 64.98 130 9.13 Yes 38 0.56 No 0 0 No -44 0.67 Yes 47 90.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59844149 - NM_032043 BRIP1 0 . . . 5.02 78.51 27 3.55 No 56 0.47 No 0 0 No -20 0.48 No 38 80.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41021606 + NM_001164269 RAD51 0 . . . 4.58 79.65 28 6.53 Yes 24 -2.4 No 0 0 No -28 0.41 No 34 59.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108238749 + NM_000051 ATM 0 . . . 2.13 73.27 15 4.58 No -1 1.18 Yes 0 0 No -57 0.62 No 47 30.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108145993 + NM_000051 ATM 0 . . . 3.79 74.06 20 7.14 Yes 39 0.7 No 0 0 No -19 0.63 No 44 72.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68403021 + NM_133509 RAD51B 0 . . . 8.68 81.49 31 5.48 No 45 1.77 Yes 0 0 No -23 0.88 Yes 53 29.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68852502 + NM_133509 RAD51B 0 . . . 9.88 84.46 16 4.87 No 1 1.18 Yes 0 0 No -15 0.34 No 42 60.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108164162 + NM_000051 ATM 0 . . . 0.98 75.24 23 4.71 No 23 1.64 Yes 0 0 No -22 0.78 Yes 35 49.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37089479 + NM_000249 MLH1 0 . . . 1.25 69.25 26 5.69 Yes 67 -4.82 No 0 0 No -25 0.47 No 43 54.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59927943 - NM_032043 BRIP1 0 . . . 3.3 69.13 32 5.57 Yes 13 0.82 Yes 0 0 No -29 0.61 No 40 77.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69003133 + NM_133509 RAD51B 0 . . . 2.68 79.81 21 5.09 No -1 0.36 No 0 0 No -20 0.77 Yes 53 45.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215653621 - NM_000465 BARD1 0 . . . 5.79 85.61 22 4.92 No 5 -0.95 No 0 0 No -55 0.67 Yes 32 55.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90972131 - NM_002485 NBN 0 . . . 1.96 0 20 7.14 Yes 12 0.03 No 0 0 No -19 0.62 No 46 83.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68830897 + NM_133509 RAD51B 0 . . . 8.38 80.46 22 5.66 Yes 57 2.77 Yes 0 0 No -21 0.83 Yes 47 74.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68461203 + NM_133509 RAD51B 0 . . . 4.42 82.13 25 6.5 Yes 47 0.97 Yes 0 0 No -24 0.82 Yes 50 69.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56800710 + NM_058216 RAD51C 0 . . . 5.25 62.41 18 4.01 No 30 1.24 Yes 0 0 No -20 0.57 No 27 78.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215642776 - NM_000465 BARD1 0 . . . 3.7 79.55 44 7.58 Yes 76 0.96 Yes 0 0 No -21 0.44 No 49 78.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68971762 + NM_133509 RAD51B 0 . . . 2.76 76.88 23 4 No 73 -5.38 No 0 0 No -22 0.86 Yes 47 40.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84382128 - NM_139076 FAM175A 0 . . . 4.94 76.75 29 5.92 Yes 48 1.22 Yes 0 0 No -28 0.76 Yes 32 87.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108147009 + NM_000051 ATM 0 . . . 0.21 0 21 4.94 No 9 2.3 Yes 0 0 No -20 0.62 No 49 62.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152359559 - NM_005431 XRCC2 0 . . . 2.12 71.33 32 5.57 Yes 65 1.13 Yes 0 0 No -31 0.34 No 11 88.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69112939 + NM_133509 RAD51B 0 . . . 5.46 81.31 23 5.39 No 18 0.15 No 0 0 No -22 0.91 Yes 45 62.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41219801 - NM_007294 BRCA1 0 . . . 2.73 71.23 25 5.77 Yes 33 -4.4 No 0 0 No -29 0.79 Yes 48 37.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47729437 + NM_000251 MSH2 0 . . . 6.31 87.04 35 6.73 Yes 76 1.9 Yes 0 0 No -39 0.51 No 49 86.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68897698 + NM_133509 RAD51B 0 . . . 1.82 75.52 25 4.14 No 34 0.74 No 0 0 No -24 0.95 Yes 44 88.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68786649 + NM_004360 CDH1 0 . . . 4.19 71.21 15 5.39 No 8 1.03 Yes 0 0 No -58 0.36 No 40 56.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68811971 + NM_004360 CDH1 0 . . . 1.52 83.14 53 8.09 Yes 51 -1.89 No 0 0 No -52 0.63 No 42 84.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131898121 + NM_005732 RAD50 0 . . . 6.07 75.56 18 4.26 No 47 -4.21 No 0 0 No -17 0.78 Yes 52 48.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59926162 - NM_032043 BRIP1 0 . . . 5.87 70.43 73 8.36 Yes 17 1.4 Yes 0 0 No -24 0.56 No 41 70 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215629612 - NM_000465 BARD1 0 . . . 7.89 91.33 29 5.53 No 4 0.63 No 0 0 No -29 0.59 No 38 46.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851209 - NM_032043 BRIP1 0 . . . 3.08 74.81 53 7.62 Yes 67 1.18 Yes 0 0 No -52 0.46 No 35 97.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68731977 + NM_133509 RAD51B 0 . . . 0.16 70.69 20 6.48 Yes 70 -6.38 No 0 0 No -27 0.55 No 43 46.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41231510 - NM_007294 BRCA1 0 . . . 4.58 67.39 19 4.82 No 32 1.11 Yes 0 0 No -23 0.82 Yes 46 71.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190683370 + NM_000534 PMS1 0 . . . 1.82 69.59 20 5.1 No 13 -0.86 No 0 0 No -19 0.48 No 45 30.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108158486 + NM_000051 ATM 0 . . . 0.16 67.86 10 4.8 No -2 0.95 Yes 0 0 No -18 0.75 Yes 60 56.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94161497 - NM_005591 MRE11 0 . . . 3.32 65.1 34 7.53 Yes 63 0.61 No 0 0 No -33 0.69 Yes 48 58.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7575544 - NM_000546 TP53 0 . . . 3.6 85.02 30 5.19 No 4 1.05 Yes 0 0 No -29 0.72 Yes 54 68.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68578732 + NM_133509 RAD51B 0 . . . 3.08 70.1 25 5.08 No 1 1.92 Yes 0 0 No -24 0.75 Yes 41 78.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37091247 + NM_000249 MLH1 0 . . . 2.05 88.01 41 7.39 Yes 76 -4.65 No 0 0 No -40 0.78 Yes 51 71.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68602791 + NM_133509 RAD51B 0 . . . 5.56 64.59 44 6.78 Yes 14 0.14 No 0 0 No -30 0.73 Yes 40 31.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68695033 + NM_133509 RAD51B 0 . . . 0.72 68.83 42 5.55 No 41 0.57 No 0 0 No -36 0.45 No 48 93.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69008072 + NM_133509 RAD51B 0 . . . 6.14 82.75 33 6.43 Yes 20 1.18 Yes 0 0 No -32 0.6 No 46 88.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190721452 + NM_000534 PMS1 0 . . . 2.69 68.42 20 5.48 No -2 0.2 No 0 0 No -26 0.59 No 60 48.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104169415 - NM_001100119 XRCC3 0 . . . 2.14 77.25 23 5.34 No 38 -3.61 No 0 0 No -22 0.64 No 40 39.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75498972 - NM_001040108 MLH3 0 . . . 5.72 73.77 20 5.3 No 8 0.68 No 0 0 No -31 0.68 Yes 43 63.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6046328 - NM_000535 PMS2 0 . . . 4.49 83.71 24 5.91 Yes 41 0.62 No 0 0 No -24 0.67 Yes 46 78.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69149848 + NM_133509 RAD51B 0 . . . 4.48 75.19 15 5.28 No 48 -4.48 No 0 0 No -27 0.66 Yes 43 84.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105184134 + NM_021930 RINT1 0 . . . 5.37 61.9 9 3.87 No 13 0.88 Yes 0 0 No -45 0.34 No 44 82.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59904432 - NM_032043 BRIP1 0 . . . 0.18 0 29 7.76 Yes 19 0.78 Yes 0 0 No -26 0.5 No 39 90.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23632666 - NM_024675 PALB2 0 . . . 7.08 0 22 4.58 No 76 1.7 Yes 0 0 No -27 0.4 No 48 76.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32910161 + NM_000059 BRCA2 0 . . . 0.64 74.58 24 5.47 No 57 1.28 Yes 0 0 No -27 0.44 No 53 39.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68345617 + NM_133509 RAD51B 0 . . . 1.17 79.35 29 5.48 No 11 1.02 Yes 0 0 No -23 0.42 No 47 94.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108230266 + NM_000051 ATM 0 . . . 4.58 67.56 21 4.81 No -3 0.69 No 0 0 No -31 0.68 Yes 43 47.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84395840 - NM_139076 FAM175A 0 . . . 4.36 87.81 36 6.13 Yes 45 1.14 Yes 0 0 No -27 0.73 Yes 25 77.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41259128 - NM_007294 BRCA1 0 . . . 2.1 76.63 21 4.73 No 58 -3.88 No 0 0 No -20 0.83 Yes 43 76.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6035925 - NM_000535 PMS2 0 . . . 0.71 83.52 44 6.85 Yes 37 1.56 Yes 0 0 No -27 0.91 Yes 31 43.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32954978 + NM_000059 BRCA2 0 . . . 1.76 73.97 29 5.38 No 68 1.08 Yes 0 0 No -28 0.78 Yes 51 41.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29122114 - NM_001005735 CHEK2 0 . . . 7.66 86.2 16 4.38 No 9 1.35 Yes 0 0 No -24 0.64 No 49 95.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68812540 + NM_133509 RAD51B 0 . . . 0.37 71.09 28 4.68 No 34 -2.82 No 0 0 No -27 0.61 No 48 72.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59762012 - NM_032043 BRIP1 0 . . . 1.27 66.59 31 6 Yes 44 0.58 No 0 0 No -22 0.59 No 48 73.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68909893 + NM_133509 RAD51B 0 . . . 3.13 71.28 26 3.76 No 70 -3.34 No 0 0 No -25 0.87 Yes 46 51.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68298250 + NM_133509 RAD51B 0 . . . 3.59 82.89 27 5.9 Yes 5 0.92 Yes 0 0 No -26 0.51 No 44 59.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6011598 - NM_000535 PMS2 0 . . . 0.52 0 37 6.37 Yes 14 -2.1 No 0 0 No -36 0.82 Yes 50 37.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29134937 - NM_001005735 CHEK2 0 . . . 8.79 90.05 38 6.63 Yes 52 -1.28 No 0 0 No -37 0.8 Yes 44 91.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41228803 - NM_007294 BRCA1 0 . . . 2.81 69.2 14 3.2 No 75 0.83 Yes 0 0 No -32 0.76 Yes 45 71.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68519923 + NM_133509 RAD51B 0 . . . 0.94 0 26 5.29 No 41 0.94 Yes 0 0 No -25 0.94 Yes 48 70.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29123456 - NM_001005735 CHEK2 0 . . . 5.52 85.6 26 5.26 No 2 -1.41 No 0 0 No -25 0.63 No 51 68.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68365617 + NM_133509 RAD51B 0 . . . 1.96 69.13 9 3.87 No 69 -4.6 No 0 0 No -32 0.35 No 44 58.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131898059 + NM_005732 RAD50 0 . . . 4.85 81.72 21 5.2 No 69 -3.08 No 0 0 No -23 0.46 No 48 47.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23644998 - NM_024675 PALB2 0 . . . 1.18 75.3 21 5.83 Yes 5 1.83 Yes 0 0 No -20 0.58 No 42 78.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89654130 + NM_000314 PTEN 0 . . . 3.58 77.13 25 5.39 No 26 0.33 No 0 0 No -53 0.56 No 27 94.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215612167 - NM_000465 BARD1 0 . . . 3.04 62.9 33 5.92 Yes 28 0.4 No 0 0 No -32 0.48 No 29 80.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215664262 - NM_000465 BARD1 0 . . . 3.21 0 46 6.07 Yes 19 0.26 No 0 0 No -24 0.81 Yes 39 84.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75503998 - NM_001040108 MLH3 0 . . . 2.13 90.31 21 4.54 No 47 -2.84 No 0 0 No -20 0.33 No 47 53.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68856189 + NM_004360 CDH1 0 . . . 10.87 85.96 25 5.1 No 38 0.62 No 0 0 No -24 0.96 Yes 45 86.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69124690 + NM_133509 RAD51B 0 . . . 2.95 68.29 17 4.45 No 15 1.75 Yes 0 0 No -23 0.73 Yes 43 88.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68467149 + NM_133509 RAD51B 0 . . . 4.71 71.07 9 4.8 No 75 0.11 No 0 0 No -45 0.25 No 46 94.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94155736 - NM_005591 MRE11 0 . . . 3.47 86.65 22 5.74 Yes 9 1.13 Yes 0 0 No -26 0.58 No 49 96.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47785723 + NM_000251 MSH2 0 . . . 9.26 82.93 28 5.8 Yes 45 0.44 No 0 0 No -30 0.58 No 36 80.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94199381 - NM_005591 MRE11 0 . . . 6.19 79.45 19 4.87 No -1 1.23 Yes 0 0 No -31 0.58 No 44 96.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59827325 - NM_032043 BRIP1 0 . . . 7.11 88.57 27 5.65 Yes 7 0.2 No 0 0 No -26 0.83 Yes 50 38.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69113807 + NM_133509 RAD51B 0 . . . 0.08 0 26 5.77 Yes 45 -2.8 No 0 0 No -25 0.28 No 49 32.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68654136 + NM_133509 RAD51B 0 . . . 3.57 68.44 32 5.55 No -3 1.26 Yes 0 0 No -31 0.55 No 39 33.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68736261 + NM_133509 RAD51B 0 . . . 2.64 0 22 3.61 No 7 1.06 Yes 0 0 No -18 0.41 No 45 90.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68792617 + NM_133509 RAD51B 0 . . . 4.47 67.02 15 6.01 Yes 58 2.13 Yes 0 0 No -22 0.24 No 38 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68949029 + NM_133509 RAD51B 0 . . . 2.27 74.75 25 5.92 Yes 65 1.84 Yes 0 0 No -24 0.82 Yes 48 76.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59767451 - NM_032043 BRIP1 0 . . . 8.15 90.32 39 4.71 No 71 1.22 Yes 0 0 No -38 0.83 Yes 43 86.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68452230 + NM_133509 RAD51B 0 . . . 3.13 74.66 21 4.69 No 61 1.01 Yes 0 0 No -20 0.89 Yes 47 65.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59919177 - NM_032043 BRIP1 0 . . . 5.2 75.77 20 6.15 Yes 25 -3.84 No 0 0 No -19 0.48 No 43 58.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68615657 + NM_133509 RAD51B 0 . . . 1.68 71.1 18 4.9 No 49 0.47 No 0 0 No -47 0.49 No 49 84.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47747893 + NM_000251 MSH2 0 . . . 4.32 77.82 37 6.32 Yes 76 -3.2 No 0 0 No -36 0.83 Yes 46 27.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69061330 + NM_133509 RAD51B 0 . . . 6.59 85.67 18 4.61 No 7 1.07 Yes 0 0 No -24 0.68 Yes 51 72.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68799904 + NM_133509 RAD51B 0 . . . 3.29 75.08 28 5.38 No 45 0.46 No 0 0 No -23 0.44 No 33 35.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6048364 - NM_000535 PMS2 0 . . . 3.29 78.34 17 4 No 70 -5.12 No 0 0 No -24 0.42 No 45 79.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108137641 + NM_000051 ATM 0 . . . 2.11 84.22 16 4.32 No 33 1 Yes 0 0 No -27 0.54 No 50 67.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41205163 - NM_007294 BRCA1 0 . . . 2.68 66.69 13 5.2 No 43 -2.82 No 0 0 No -22 0.63 No 47 40.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68839104 + NM_004360 CDH1 0 . . . 9.31 85.02 29 8.54 Yes 65 1.98 Yes 0 0 No -28 0.46 No 23 61.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68795096 + NM_004360 CDH1 0 . . . 2.18 84.67 13 4.29 No 7 0.19 No 0 0 No -50 0.52 No 51 35.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32937215 + NM_000059 BRCA2 0 . . . 1.69 0 17 4.8 No 0 0.53 No 0 0 No -58 0.32 No 42 58.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89696222 + NM_000314 PTEN 0 . . . 0.6 69.06 27 7.21 Yes 67 0.36 No 0 0 No -26 0.97 Yes 41 84.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68526329 + NM_133509 RAD51B 0 . . . 7.42 78.6 22 4.95 No 76 1.23 Yes 0 0 No -61 0.88 Yes 42 61.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94184411 - NM_005591 MRE11 0 . . . 0.92 0 21 7.82 Yes 46 1.05 Yes 0 0 No -20 0.85 Yes 44 59.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108148870 + NM_000051 ATM 0 . . . 0.56 77.84 33 5.35 No 67 -5.55 No 0 0 No -32 0.32 No 46 73.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131967992 + NM_005732 RAD50 0 . . . 2.24 69.19 13 5.11 No 2 0.15 No 0 0 No -24 0.63 No 56 52.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68623885 + NM_133509 RAD51B 0 . . . 0.8 76.63 40 6.41 Yes 58 -3.95 No 0 0 No -40 0.74 Yes 44 53.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68983860 + NM_133509 RAD51B 0 . . . 7.49 91.89 27 5.96 Yes 9 1.29 Yes 0 0 No -30 0.37 No 49 98.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69051236 + NM_133509 RAD51B 0 . . . 4.92 0 23 6.85 Yes 41 2.24 Yes 0 0 No -21 0.79 Yes 53 75.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68362452 + NM_133509 RAD51B 0 . . . 1.67 69.43 23 6.15 Yes 44 0.74 No 0 0 No -22 0.87 Yes 42 68.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108126632 + NM_000051 ATM 0 . . . 6.28 73.28 14 4.47 No 57 0.88 Yes 0 0 No -31 0.95 Yes 46 93.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59761292 - NM_032043 BRIP1 0 . . . 6.34 76.66 33 5.77 Yes 67 -3.2 No 0 0 No -24 0.62 No 48 61.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108131819 + NM_000051 ATM 0 . . . 0.28 0 16 6.85 Yes 49 -2.67 No 0 0 No -28 0.55 No 65 21.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108182305 + NM_000051 ATM 0 . . . 1.26 66.04 14 5.57 Yes 49 0.21 No 0 0 No -24 0.75 Yes 50 43.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131944732 + NM_005732 RAD50 0 . . . 3.16 79.64 20 5.28 No -3 0.9 Yes 0 0 No -19 0.69 Yes 46 61.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131952479 + NM_005732 RAD50 0 . . . 1.03 71.17 18 5.74 Yes 67 -5.13 No 0 0 No -26 0.77 Yes 51 89.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68474889 + NM_133509 RAD51B 0 . . . 4.68 81.55 41 7.18 Yes 7 0.55 No 0 0 No -31 0.4 No 43 74.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32938701 + NM_000059 BRCA2 0 . . . 3.89 72.89 11 4.8 No 22 0.79 Yes 0 0 No -20 0.31 No 52 51.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68775809 + NM_004360 CDH1 0 . . . 6.21 82.31 33 7.49 Yes 4 0.68 No 0 0 No -32 0.81 Yes 54 69.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68747114 + NM_133509 RAD51B 0 . . . 3.97 81.12 33 7.61 Yes 69 0.63 No 0 0 No -32 0.94 Yes 44 85.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68761224 + NM_133509 RAD51B 0 . . . 6.2 81.8 25 5.39 No 10 0.12 No 0 0 No -22 0.74 Yes 35 42.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7570661 - NM_000546 TP53 0 . . . 6.18 85.97 25 5.25 No 15 0.57 No 0 0 No -27 0.59 No 47 57.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47645817 + NM_000251 MSH2 0 . . . 3.55 70.5 27 5.38 No 70 1.07 Yes 0 0 No -26 0.91 Yes 52 58.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68739609 + NM_133509 RAD51B 0 . . . 1.89 72.26 14 5.57 Yes 30 1.19 Yes 0 0 No -25 0.64 No 28 75.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45795290 - NM_001048171 MUTYH 0 . . . 3.55 90.05 18 5.21 No 52 2.05 Yes 0 0 No -25 0.84 Yes 43 64.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32952409 + NM_000059 BRCA2 0 . . . 8.57 88.69 36 5.89 Yes 5 0.81 Yes 0 0 No -25 0.58 No 46 65.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32938781 + NM_000059 BRCA2 0 . . . 10.38 90.92 12 5.36 No 52 0.81 Yes 0 0 No -22 0.71 Yes 38 66.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68357782 + NM_133509 RAD51B 0 . . . 8.55 94.18 28 5.66 Yes 67 0.41 No 0 0 No -27 0.64 No 45 75.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68416071 + NM_133509 RAD51B 0 . . . 0.4 58.2 27 5.2 No 21 1.22 Yes 0 0 No -26 0.47 No 37 72.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152346036 - NM_005431 XRCC2 0 . . . 1.18 66.42 27 6.16 Yes 67 0.17 No 0 0 No -26 0.73 Yes 39 89.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21986598 - NM_000077 CDKN2A 0 . . . 9.87 86.81 14 4.47 No 70 0.64 No 0 0 No -28 0.6 No 37 83.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75499564 - NM_001040108 MLH3 0 . . . 5.75 75.25 36 4.55 No 5 0.33 No 0 0 No -24 0.9 Yes 39 66.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29098581 - NM_001005735 CHEK2 0 . . . 3.53 77.69 15 4.08 No 75 -5.75 No 0 0 No -26 0.57 No 48 82.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47749894 + NM_000251 MSH2 0 . . . 4.77 72.55 20 5.57 Yes -2 0.73 No 0 0 No -19 0.72 Yes 45 55.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89726609 + NM_000314 PTEN 0 . . . 3.48 86.37 14 5.57 Yes -3 0.13 No 0 0 No -24 0.83 Yes 41 38.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190682977 + NM_000534 PMS1 0 . . . 2.86 72.21 31 6.08 Yes 56 0.4 No 0 0 No -30 0.75 Yes 43 59.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59764917 - NM_032043 BRIP1 0 . . . 3.28 65.44 29 5.08 No 71 0.52 No 0 0 No -23 0.4 No 52 35.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59907972 - NM_032043 BRIP1 0 . . . 2.98 0 12 5 No 10 0.87 Yes 0 0 No -18 0.26 No 48 88.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108198569 + NM_000051 ATM 0 . . . 1.74 71.76 16 5.29 No 20 0.38 No 0 0 No -21 0.53 No 46 88.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131968741 + NM_005732 RAD50 0 . . . 0.15 58.67 24 4.57 No 11 0.55 No 0 0 No -20 0.56 No 47 75.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68959156 + NM_133509 RAD51B 0 . . . 2.8 66.22 14 4.47 No 54 0.59 No 0 0 No -13 0.55 No 52 60.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68673813 + NM_133509 RAD51B 0 . . . 2.33 71.21 12 5.92 Yes 64 1.69 Yes 0 0 No -44 0.46 No 46 71.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69129073 + NM_133509 RAD51B 0 . . . 5.78 83.94 19 4.69 No 19 0.68 No 0 0 No -24 0.8 Yes 39 56.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89636942 + NM_000314 PTEN 0 . . . 6.1 77.49 18 5.83 Yes 10 0.61 No 0 0 No -27 0.76 Yes 39 54.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41272264 - NM_007294 BRCA1 0 . . . 5.57 74.32 21 4.47 No 12 0.85 Yes 0 0 No -20 0.39 No 46 78.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68879206 + NM_133509 RAD51B 0 . . . 4.11 78.91 42 5.39 No 41 1.06 Yes 0 0 No -25 0.79 Yes 38 45.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108224270 + NM_000051 ATM 0 . . . 1.37 0 26 5.5 No 4 1.06 Yes 0 0 No -25 0.75 Yes 54 74.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68956667 + NM_133509 RAD51B 0 . . . 6.52 0 20 3.93 No 2 0.44 No 0 0 No -45 0.89 Yes 48 94.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68629232 + NM_133509 RAD51B 0 . . . 0.03 59.28 35 7 Yes 57 0.36 No 0 0 No -34 0.67 Yes 24 59.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68591225 + NM_133509 RAD51B 0 . . . 0.36 77.05 20 4.79 No 1 0.83 Yes 0 0 No -19 0.54 No 23 39.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108139995 + NM_000051 ATM 0 . . . 5.98 68.2 19 4.8 No 46 0.91 Yes 0 0 No -39 0.59 No 48 61.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21968663 - NM_000077 CDKN2A 0 . . . 3.41 68.29 31 4.47 No 11 0.76 No 0 0 No -30 0.45 No 47 83.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68793473 + NM_133509 RAD51B 0 . . . 1.35 71.76 18 3.56 No 34 0.9 Yes 0 0 No -21 0.83 Yes 43 61.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68407353 + NM_133509 RAD51B 0 . . . 0.92 69.8 19 6.75 Yes 75 2.09 Yes 0 0 No -26 0.61 No 40 63.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21990887 - NM_000077 CDKN2A 0 . . . 6.37 82.98 39 9.06 Yes 63 0.95 Yes 0 0 No -38 0.42 No 38 37.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90992737 - NM_002485 NBN 0 . . . 7.06 77.3 13 3.87 No 38 1.11 Yes 0 0 No -30 0.93 Yes 51 79.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48020068 + NM_000179 MSH6 0 . . . 3.67 87.72 22 5.29 No 4 0.15 No 0 0 No -21 0.52 No 20 29.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215591736 - NM_000465 BARD1 0 . . . 0.33 0 29 4.5 No 75 -5.76 No 0 0 No -29 0.41 No 54 61.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94173560 - NM_005591 MRE11 0 . . . 3.28 81.59 16 5.82 Yes 8 0.64 No 0 0 No -20 0.39 No 50 68.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131942748 + NM_005732 RAD50 0 . . . 1.52 71.55 22 5.29 No 68 0.24 No 0 0 No -21 0.63 No 48 44.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68446080 + NM_133509 RAD51B 0 . . . 3.39 77.01 31 5.48 No 64 0.66 No 0 0 No -49 0.92 Yes 49 58.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68683327 + NM_133509 RAD51B 0 . . . 0.71 0 19 4.06 No 48 0.11 No 0 0 No -19 0.65 No 55 47.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68849199 + NM_004360 CDH1 0 . . . 1.64 64.45 38 5.55 No 18 0.23 No 0 0 No -25 0.73 Yes 57 40.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56797952 + NM_058216 RAD51C 0 . . . 2.42 84.22 13 4.12 No 35 1.12 Yes 0 0 No -28 0.33 No 50 35.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69032092 + NM_133509 RAD51B 0 . . . 3.14 66.45 20 4.39 No 58 0.51 No 0 0 No -20 0.71 Yes 41 76.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33429119 - NM_002878 RAD51D 0 . . . 1.16 79.39 15 4.58 No 41 1 Yes 0 0 No -19 0.66 No 50 47.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48022193 + NM_000179 MSH6 0 . . . 8.17 86.84 28 5.2 No 19 1.78 Yes 0 0 No -27 0.66 No 39 73.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68399440 + NM_133509 RAD51B 0 . . . 3.88 77.92 18 4.9 No 9 0.73 No 0 0 No -26 0.48 No 49 76.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68775303 + NM_133509 RAD51B 0 . . . 3.02 65.22 34 6.28 Yes 55 0.08 No 0 0 No -33 0.73 Yes 38 70.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69136848 + NM_133509 RAD51B 0 . . . 3.91 75.08 15 5.39 No 18 1.12 Yes 0 0 No -26 0.63 No 45 66.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68809188 + NM_004360 CDH1 0 . . . 3.94 66.56 20 5.99 Yes -2 0.14 No 0 0 No -19 0.74 Yes 42 74.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68334101 + NM_133509 RAD51B 0 . . . 2.4 75.47 31 5.83 Yes 29 -2.44 No 0 0 No -30 0.92 Yes 39 58.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89681156 + NM_000314 PTEN 0 . . . 3.77 0 38 4.68 No 46 1.11 Yes 0 0 No -37 0.34 No 34 27.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48028043 + NM_000179 MSH6 0 . . . 0.03 62.26 24 5.96 Yes 67 -4.96 No 0 0 No -23 0.69 Yes 44 62.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47751662 + NM_000251 MSH2 0 . . . 1.48 0 15 4.07 No 38 -2.75 No 0 0 No -26 0.55 No 58 35.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90961690 - NM_002485 NBN 0 . . . 4.15 73.13 21 5.45 No 25 1.24 Yes 0 0 No -21 0.38 No 48 75.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68323309 + NM_133509 RAD51B 0 . . . 8.08 94.25 14 5.29 No 56 0.34 No 0 0 No -37 0.61 No 47 79.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59900932 - NM_032043 BRIP1 0 . . . 6.4 78.25 14 5.04 No 9 1.52 Yes 0 0 No -25 0.44 No 49 78.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7564814 - NM_000546 TP53 0 . . . 2.1 76.63 13 5.19 No 58 -3.88 No 0 0 No -17 0.48 No 48 61.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68625674 + NM_133509 RAD51B 0 . . . 6.3 84.37 46 9.07 Yes 23 0.98 Yes 0 0 No -24 0.32 No 35 87.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68405613 + NM_133509 RAD51B 0 . . . 6.7 79.01 13 4.35 No 1 1.06 Yes 0 0 No -21 0.8 Yes 51 65.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68870733 + NM_004360 CDH1 0 . . . 5.45 79.48 26 4.54 No 2 0.63 No 0 0 No -25 0.91 Yes 37 53.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47693702 + NM_000251 MSH2 0 . . . 3.07 71.79 12 4.24 No 39 0.17 No 0 0 No -19 0.39 No 41 75.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89719097 + NM_000314 PTEN 0 . . . 3.54 82.86 13 5.1 No 11 1.28 Yes 0 0 No -28 0.32 No 47 79.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68365560 + NM_133509 RAD51B 0 . . . 3.61 62.8 26 5.66 Yes 58 -5.26 No 0 0 No -25 0.91 Yes 33 29.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37084750 + NM_000249 MLH1 0 . . . 2.57 0 15 4.12 No 36 1.03 Yes 0 0 No -23 0.52 No 35 76.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29100964 - NM_001005735 CHEK2 0 . . . 6.09 89.51 42 6.92 Yes 7 1.86 Yes 0 0 No -41 0.89 Yes 51 82.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68690009 + NM_133509 RAD51B 0 . . . 0.5 0 31 5.88 Yes 10 0.58 No 0 0 No -22 0.67 Yes 48 60.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215626673 - NM_000465 BARD1 0 . . . 3.37 82.49 47 6.51 Yes 9 0.25 No 0 0 No -46 0.79 Yes 49 67.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59903798 - NM_032043 BRIP1 0 . . . 5.82 76.09 11 4.67 No 1 0.09 No 0 0 No -18 0.5 No 44 86.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84382426 - NM_139076 FAM175A 0 . . . 7.32 84.75 31 6 Yes 8 0.74 No 0 0 No -30 0.66 No 43 87.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190723737 + NM_000534 PMS1 0 . . . 0.65 82.55 28 5.79 Yes 26 1.3 Yes 0 0 No -27 0.38 No 28 63.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68820966 + NM_004360 CDH1 0 . . . 10.23 89.52 25 5.1 No 20 0.31 No 0 0 No -24 0.9 Yes 46 62.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7577966 - NM_000546 TP53 0 . . . 3.8 70.25 23 3.33 No 16 0.5 No 0 0 No -22 0.7 Yes 42 85.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59887937 - NM_032043 BRIP1 0 . . . 1.15 71.64 14 5.39 No 73 0.32 No 0 0 No -22 0.43 No 49 93.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37040649 + NM_000249 MLH1 0 . . . 0.95 75.56 29 5.74 Yes 74 1 Yes 0 0 No -28 0.57 No 53 73.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68821940 + NM_004360 CDH1 0 . . . 1.29 74.73 25 5.47 No 34 1.59 Yes 0 0 No -28 0.8 Yes 24 60.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59773409 - NM_032043 BRIP1 0 . . . 3.91 77.15 15 5.39 No 4 0.88 Yes 0 0 No -26 0.64 No 39 49.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68760589 + NM_133509 RAD51B 0 . . . 4.33 80.64 32 6.44 Yes 72 0.95 Yes 0 0 No -31 0.68 Yes 39 88.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47661729 + NM_000251 MSH2 0 . . . 6.55 92.03 21 5.04 No NA NA NA 0 0 No -45 0.49 No 50 46.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68822345 + NM_133509 RAD51B 0 . . . 3.26 78.18 30 7.32 Yes 57 -2.71 No 0 0 No -34 0.52 No 41 95.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69097982 + NM_133509 RAD51B 0 . . . 1.27 70.68 22 4.76 No 65 -2.61 No 0 0 No -24 0.86 Yes 50 69.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41196021 - NM_007294 BRCA1 0 . . . 3.66 0 19 5.57 Yes 64 -2.51 No 0 0 No -24 0.58 No 45 61.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29094665 - NM_001005735 CHEK2 0 . . . 2.86 82.63 22 5.65 Yes 0 0.18 No 0 0 No -21 0.81 Yes 49 73.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68776744 + NM_133509 RAD51B 0 . . . 4.35 87.18 26 5.1 No 73 -4.53 No 0 0 No -19 0.44 No 51 75.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29105210 - NM_001005735 CHEK2 0 . . . 2.97 68.2 28 5.34 No 34 0.47 No 0 0 No -27 0.39 No 40 66.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215595504 - NM_000465 BARD1 0 . . . 0.61 0 20 5.65 Yes 73 1.17 Yes 0 0 No -19 0.71 Yes 49 58.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190674589 + NM_000534 PMS1 0 . . . 7.61 91.98 9 4.69 No 7 0.78 Yes 0 0 No -23 0.55 No 45 52.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89677559 + NM_000314 PTEN 0 . . . 0.99 72.46 26 6.13 Yes 17 0.74 No 0 0 No -31 0.5 No 48 86.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47651633 + NM_000251 MSH2 0 . . . 3.19 70.85 22 5.92 Yes 22 1.55 Yes 0 0 No -25 0.64 No 41 76.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48009371 + NM_000179 MSH6 0 . . . 1.15 73.96 29 5.85 Yes 7 1.02 Yes 0 0 No -28 0.75 Yes 51 76.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131958531 + NM_005732 RAD50 0 . . . 0.75 83.17 34 5.22 No 4 1.62 Yes 0 0 No -24 0.48 No 38 52.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69085263 + NM_133509 RAD51B 0 . . . 6.34 77.04 25 5.48 No 38 1.31 Yes 0 0 No -24 0.8 Yes 45 77.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69030125 + NM_133509 RAD51B 0 . . . 2.51 0 18 5.39 No 33 0.44 No 0 0 No -22 0.19 No 33 64.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69102972 + NM_133509 RAD51B 0 . . . 0.98 0 26 6.24 Yes 61 -1.4 No 0 0 No -25 0.89 Yes 51 37.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32957249 + NM_000059 BRCA2 0 . . . 0.24 73.55 24 4.96 No 3 0.93 Yes 0 0 No -24 0.8 Yes 55 72.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48017244 + NM_000179 MSH6 0 . . . 1.92 55.92 25 4.23 No 20 0.11 No 0 0 No -24 0.66 No 38 79.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68687573 + NM_133509 RAD51B 0 . . . 0.39 75.86 28 5.66 Yes 68 -5.64 No 0 0 No -27 0.81 Yes 45 24.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29087746 - NM_001005735 CHEK2 0 . . . 2.9 62.16 26 7.29 Yes 26 1.13 Yes 0 0 No -25 0.79 Yes 32 91.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68386267 + NM_133509 RAD51B 0 . . . 1.61 66.72 30 6.39 Yes 48 1.61 Yes 0 0 No -29 0.9 Yes 41 86.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68849630 + NM_004360 CDH1 0 . . . 3.83 81.15 14 4.47 No 53 -3.7 No 0 0 No -35 0.81 Yes 52 86.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215607981 - NM_000465 BARD1 0 . . . 3.77 72.78 22 4.68 No 44 -4.33 No 0 0 No -21 0.97 Yes 44 64.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47642343 + NM_000251 MSH2 0 . . . 1.88 83.13 25 9.12 Yes 47 0.27 No 0 0 No -24 0.49 No 38 91.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37076375 + NM_000249 MLH1 0 . . . 2.77 0 57 7.68 Yes 55 0.68 No 0 0 No -45 0.58 No 40 73.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33427811 - NM_002878 RAD51D 0 . . . 1.36 71.76 15 4.15 No 0 0.52 No 0 0 No -22 0.58 No 38 72.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108179526 + NM_000051 ATM 0 . . . 6.53 82.96 16 5.11 No 7 0.65 No 0 0 No -21 0.49 No 40 47.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1229482 + NM_000455 STK11 0 . . . 1.86 71.87 17 4.57 No NA NA NA 0 0 No -22 0.58 No 61 13.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190735939 + NM_000534 PMS1 0 . . . 3.8 70.7 24 5.2 No 32 0.99 Yes 0 0 No -57 0.38 No 44 64.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68666694 + NM_133509 RAD51B 0 . . . 3.05 76.26 27 5.71 Yes -2 0.01 No 0 0 No -26 0.77 Yes 12 43.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105190829 + NM_021930 RINT1 0 . . . 2.38 82.2 29 7.37 Yes 58 1.44 Yes 0 0 No -28 0.67 Yes 24 59.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215662425 - NM_000465 BARD1 0 . . . 0.67 81.42 45 5.38 No 60 0.96 Yes 0 0 No -41 0.26 No 33 63.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90972817 - NM_002485 NBN 0 . . . 2.5 71.95 23 4.08 No -2 0.28 No 0 0 No -29 0.5 No 45 69.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108176525 + NM_000051 ATM 0 . . . 2.79 72.75 25 5.57 Yes 75 0.25 No 0 0 No -24 0.44 No 48 51.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68548412 + NM_133509 RAD51B 0 . . . 8.93 87.38 21 5.9 Yes 67 -3.72 No 0 0 No -20 0.62 No 42 39.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29101904 - NM_001005735 CHEK2 0 . . . 5.41 90.92 20 4.79 No 3 0.8 Yes 0 0 No -19 0.72 Yes 43 61.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105181029 + NM_021930 RINT1 0 . . . 2.24 80.12 21 5.74 Yes 8 0.91 Yes 0 0 No -20 0.87 Yes 50 69.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23653563 - NM_024675 PALB2 0 . . . 0.1 68.52 17 4.79 No 42 1.38 Yes 0 0 No -36 0.84 Yes 12 40.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47771887 + NM_000251 MSH2 0 . . . 3.29 77.11 24 4.9 No 67 1.87 Yes 0 0 No -23 0.4 No 30 66.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68873354 + NM_133509 RAD51B 0 . . . 5.64 76.58 14 5.57 Yes 4 0.46 No 0 0 No -27 0.52 No 51 82.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47692201 + NM_000251 MSH2 0 . . . 3.74 78.99 35 6.4 Yes 12 0.87 Yes 0 0 No -34 0.82 Yes 46 78.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68508688 + NM_133509 RAD51B 0 . . . 0.25 76.41 33 7.21 Yes 73 1.35 Yes 0 0 No -32 0.6 No 46 38.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52435557 - NM_004656 BAP1 0 . . . 3.14 74.63 41 5.95 Yes 36 0.84 Yes 0 0 No -31 0.87 Yes 53 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69137803 + NM_133509 RAD51B 0 . . . 3.64 0 12 4.52 No 10 1.6 Yes 0 0 No -36 0.43 No 48 90.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41262502 - NM_007294 BRCA1 0 . . . 1.64 81.9 19 5.65 Yes 33 1.02 Yes 0 0 No -18 0.23 No 50 82.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108126546 + NM_000051 ATM 0 . . . 0.09 75.25 23 5.6 Yes 13 0.17 No 0 0 No -22 0.76 Yes 49 54.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48017006 + NM_000179 MSH6 0 . . . 3.75 84.95 16 4.69 No 43 0.53 No 0 0 No -43 0.41 No 15 59.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215649594 - NM_000465 BARD1 0 . . . 5.27 77.74 46 6.17 Yes 7 2.36 Yes 0 0 No -35 0.8 Yes 34 76.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41007648 + NM_001164269 RAD51 0 . . . 0.98 61.29 27 5.74 Yes 30 0.51 No 0 0 No -26 0.6 No 44 95.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68926501 + NM_133509 RAD51B 0 . . . 5.31 73.34 33 6.69 Yes 40 1.46 Yes 0 0 No -25 0.4 No 33 64.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68540699 + NM_133509 RAD51B 0 . . . 0.25 74.28 11 4.12 No 40 1.98 Yes 0 0 No -27 0.53 No 41 71.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69019679 + NM_133509 RAD51B 0 . . . 2.24 76.03 46 6.86 Yes 35 0.95 Yes 0 0 No -46 0.41 No 44 83.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69108251 + NM_133509 RAD51B 0 . . . 6.52 74.85 21 6.5 Yes 22 0.58 No 0 0 No -20 0.93 Yes 35 84.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68979649 + NM_133509 RAD51B 0 . . . 1.44 76.26 54 6.78 Yes 76 -6.15 No 0 0 No -23 0.95 Yes 53 58.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68669483 + NM_133509 RAD51B 0 . . . 1.87 80.12 22 5.29 No 6 1.13 Yes 0 0 No -22 0.7 Yes 52 77.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190674529 + NM_000534 PMS1 0 . . . 3.56 80.22 24 4.47 No 67 -4.21 No 0 0 No -23 0.81 Yes 43 52.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68605247 + NM_133509 RAD51B 0 . . . 6.68 74.5 37 7.5 Yes 58 1.01 Yes 0 0 No -37 0.54 No 39 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6033391 - NM_000535 PMS2 0 . . . 4.72 84.22 28 5.38 No 8 1.12 Yes 0 0 No -27 0.71 Yes 50 93.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215629293 - NM_000465 BARD1 0 . . . 6.24 79.34 15 4.58 No 2 0.08 No 0 0 No -18 0.4 No 38 89.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68986045 + NM_133509 RAD51B 0 . . . 2.33 67.75 26 5.09 No -2 0.32 No 0 0 No -25 0.79 Yes 60 42.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68586150 + NM_133509 RAD51B 0 . . . 4.05 67.92 62 7.58 Yes 1 1.57 Yes 0 0 No -16 0.73 Yes 49 75.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215655597 - NM_000465 BARD1 0 . . . 3.27 77.47 9 5 No 66 0.97 Yes 0 0 No -51 0.84 Yes 43 60.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108118753 + NM_000051 ATM 0 . . . 6.55 75.03 20 5.83 Yes 27 1.26 Yes 0 0 No -27 0.53 No 31 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104166795 - NM_001100119 XRCC3 0 . . . 3.83 81.89 35 4.79 No 56 0.05 No 0 0 No -23 0.9 Yes 49 56.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69113938 + NM_133509 RAD51B 0 . . . 5.68 84.91 22 4.9 No 57 1.65 Yes 0 0 No -21 0.48 No 46 90.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68606188 + NM_133509 RAD51B 0 . . . 3.3 76.83 27 5.57 Yes 19 0.41 No 0 0 No -24 0.92 Yes 63 38.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190691049 + NM_000534 PMS1 0 . . . 0.47 73.99 10 4.8 No 21 0.51 No 0 0 No -43 0.44 No 52 87.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84404923 - NM_139076 FAM175A 0 . . . 2.55 80.77 78 7.71 Yes 5 0.56 No 0 0 No -23 0.79 Yes 34 53.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48007052 + NM_000179 MSH6 0 . . . 3.27 80.22 29 6.3 Yes 67 -4.96 No 0 0 No -33 0.66 No 43 73.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47647360 + NM_000251 MSH2 0 . . . 1.54 72.21 21 5.02 No 22 -2.15 No 0 0 No -20 0.59 No 42 43.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538207 + NM_133509 RAD51B 0 . . . 0.58 0 18 4.57 No 36 0.61 No 0 0 No -17 0.72 Yes 50 45.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29113619 - NM_001005735 CHEK2 0 . . . 7.5 81.31 30 5.48 No 21 1.58 Yes 0 0 No -23 0.59 No 42 74.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68798004 + NM_133509 RAD51B 0 . . . 0.15 78.47 17 6.08 Yes 61 -5.09 No 0 0 No -16 0.78 Yes 46 37.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59911242 - NM_032043 BRIP1 0 . . . 0.17 0 28 5.15 No 46 0.35 No 0 0 No -27 0.8 Yes 33 90.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68840555 + NM_133509 RAD51B 0 . . . 0.32 0 16 5.09 No 9 0.21 No 0 0 No -45 0.85 Yes 44 71.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47799771 + NM_000251 MSH2 0 . . . 5.67 62.86 31 6.75 Yes 57 -3.52 No 0 0 No -30 0.59 No 57 76.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104178241 - NM_001100119 XRCC3 0 . . . 3.83 83.78 21 3.9 No 38 0.09 No 0 0 No -19 0.87 Yes 53 67.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59923281 - NM_032043 BRIP1 0 . . . 2.74 67.28 28 6.27 Yes 38 1.69 Yes 0 0 No -27 0.93 Yes 47 63.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69126352 + NM_133509 RAD51B 0 . . . 2.05 81.47 22 4.69 No 44 -1.86 No 0 0 No -21 0.97 Yes 50 32.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68973683 + NM_133509 RAD51B 0 . . . 2 65 23 4.39 No 47 -4.82 No 0 0 No -22 0.73 Yes 51 44.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59877605 - NM_032043 BRIP1 0 . . . 6.57 82.13 32 5.83 Yes 54 1.23 Yes 0 0 No -31 0.47 No 48 84.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152350904 - NM_005431 XRCC2 0 . . . 2.35 68.58 17 5.57 Yes 12 -3.19 No 0 0 No -16 0.73 Yes 39 82.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32969487 + NM_000059 BRCA2 0 . . . 4.25 81.31 29 5.74 Yes 45 0.2 No 0 0 No -28 0.69 Yes 44 76.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68549182 + NM_133509 RAD51B 0 . . . 3.05 77.14 16 4.83 No 60 0.78 Yes 0 0 No -20 0.84 Yes 29 82.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37054421 + NM_000249 MLH1 0 . . . 2.66 83.57 35 6.04 Yes 52 1.53 Yes 0 0 No -34 0.67 Yes 36 85.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23645498 - NM_024675 PALB2 0 . . . 1.56 69.66 25 6.54 Yes 49 0.91 Yes 0 0 No -24 0.92 Yes 48 46.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131908557 + NM_005732 RAD50 0 . . . 4.99 80.59 10 5.94 Yes 47 1.54 Yes 0 0 No -27 0.4 No 43 63.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68720826 + NM_133509 RAD51B 0 . . . 0.08 76.5 25 5.49 No 69 0.83 Yes 0 0 No -24 0.75 Yes 42 51.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108233861 + NM_000051 ATM 0 . . . 2.23 80.33 26 5.31 No 34 0.74 No 0 0 No -26 0.78 Yes 46 62.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68558074 + NM_133509 RAD51B 0 . . . 7.86 85.15 34 5.83 Yes 20 0.64 No 0 0 No -22 0.4 No 38 51.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68644707 + NM_133509 RAD51B 0 . . . 1.7 78.03 19 6.24 Yes 67 -4.8 No 0 0 No -24 0.37 No 47 55.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68939053 + NM_133509 RAD51B 0 . . . 1.7 67.02 18 4.51 No 67 -3.5 No 0 0 No -44 0.76 Yes 59 27.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59754855 - NM_032043 BRIP1 0 . . . 7.11 77.6 15 5.18 No 15 -0.18 No 0 0 No -28 0.62 No 46 38.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84392726 - NM_139076 FAM175A 0 . . . 1.84 75.37 24 5.98 Yes 63 0.74 No 0 0 No -23 0.97 Yes 29 52.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68321878 + NM_133509 RAD51B 0 . . . 3.68 70.85 37 7.35 Yes 21 1.71 Yes 0 0 No -36 0.91 Yes 42 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68791386 + NM_133509 RAD51B 0 . . . 2.28 0 33 6.06 Yes 14 0.26 No 0 0 No -32 0.71 Yes 44 62.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108236417 + NM_000051 ATM 0 . . . 4.85 75.48 29 4.44 No 11 0.22 No 0 0 No -46 0.58 No 40 60.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68391678 + NM_133509 RAD51B 0 . . . 2.86 83.63 42 4.5 No 63 0.16 No 0 0 No -32 0.54 No 46 65.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68767643 + NM_133509 RAD51B 0 . . . 0.92 67.59 33 5.55 No 59 0.72 No 0 0 No -32 0.74 Yes 54 50.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56813246 + NM_058216 RAD51C 0 . . . 0.93 74.93 80 8.85 Yes 54 -3.39 No 0 0 No -21 0.6 No 53 82.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68395629 + NM_133509 RAD51B 0 . . . 0.85 64.75 16 2.99 No 55 1.08 Yes 0 0 No -15 0.35 No 52 68.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108097427 + NM_000051 ATM 0 . . . 2.89 72.61 37 7.02 Yes 61 1.43 Yes 0 0 No -36 0.69 Yes 42 85.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6028869 - NM_000535 PMS2 0 . . . 1.13 79.34 26 6.89 Yes 33 1.52 Yes 0 0 No -25 0.57 No 25 52.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68738790 + NM_133509 RAD51B 0 . . . 5.79 84.59 9 5.48 No 13 0.3 No 0 0 No -23 0.63 No 49 76.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69111502 + NM_133509 RAD51B 0 . . . 0.04 65.32 13 6.3 Yes 6 1.04 Yes 0 0 No -29 0.91 Yes 48 50.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105185438 + NM_021930 RINT1 0 . . . 4.68 80.97 50 7.02 Yes 11 1.38 Yes 0 0 No -34 0.67 Yes 47 51.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68839012 + NM_133509 RAD51B 0 . . . 5.99 83.27 21 5.2 No -1 0.17 No 0 0 No -24 0.61 No 46 54.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29088089 - NM_001005735 CHEK2 0 . . . 4.58 81.74 23 5.03 No 39 0.01 No 0 0 No -28 0.46 No 42 75.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68629191 + NM_133509 RAD51B 0 . . . 2.08 0 26 5.38 No 61 1.02 Yes 0 0 No -22 0.59 No 49 84.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68708601 + NM_133509 RAD51B 0 . . . 2.09 66.5 29 5.44 No 44 1.34 Yes 0 0 No -26 0.61 No 14 62.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68413346 + NM_133509 RAD51B 0 . . . 3.13 68.34 93 9.63 Yes 21 1.7 Yes 0 0 No -29 0.78 Yes 37 56.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108173151 + NM_000051 ATM 0 . . . 4.16 62.16 18 5.28 No 66 -6.18 No 0 0 No -21 0.77 Yes 46 89.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41222854 - NM_007294 BRCA1 0 . . . 2.1 61.71 24 4.8 No 16 -2.54 No 0 0 No -22 0.69 Yes 42 79.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68341510 + NM_133509 RAD51B 0 . . . 5.89 73.61 17 5.57 Yes 7 1.85 Yes 0 0 No -16 0.67 Yes 43 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68900908 + NM_133509 RAD51B 0 . . . 0.3 71.41 26 5.07 No 38 0.07 No 0 0 No -20 0.65 No 53 60.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6049389 - NM_000535 PMS2 0 . . . 1.1 74.73 32 5.54 No 47 0.72 No 0 0 No -21 0.66 No 11 46.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68682475 + NM_133509 RAD51B 0 . . . 2.56 0 25 5.2 No 71 -3.66 No 0 0 No -24 0.52 No 56 75.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7571176 - NM_000546 TP53 0 . . . 6.41 74.79 12 5.39 No 48 -1.76 No 0 0 No -26 0.21 No 51 92.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48009729 + NM_000179 MSH6 0 . . . 4.5 69.67 11 4.12 No 15 1.16 Yes 0 0 No -45 0.36 No 43 95.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7575541 - NM_000546 TP53 0 . . . 2.24 80.12 30 5.39 No 7 1.02 Yes 0 0 No -29 0.8 Yes 51 81.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48023075 + NM_000179 MSH6 0 . . . 0.35 82.93 12 4.24 No 58 0.33 No 0 0 No -37 0.66 No 55 27.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94208521 - NM_005591 MRE11 0 . . . 0.81 54.94 25 5.92 Yes 29 -2.25 No 0 0 No -24 0.67 Yes 45 66.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215603505 - NM_000465 BARD1 0 . . . 5.68 84.42 17 4.04 No 68 0.49 No 0 0 No -26 0.54 No 51 80.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47721166 + NM_000251 MSH2 0 . . . 6.57 92.41 22 5.1 No 7 0.4 No 0 0 No -21 0.58 No 50 79.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90966589 - NM_002485 NBN 0 . . . 2.12 80.33 31 6.71 Yes 35 0.7 No 0 0 No -30 0.9 Yes 40 59.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68587348 + NM_133509 RAD51B 0 . . . 5.58 85.5 21 4.58 No 72 0.23 No 0 0 No -19 0.86 Yes 45 45.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29112558 - NM_001005735 CHEK2 0 . . . 1.36 67.88 16 4.47 No 73 0.55 No 0 0 No -15 0.54 No 53 51.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41015376 + NM_001164269 RAD51 0 . . . 2.56 70.03 21 4.69 No 15 0.77 Yes 0 0 No -20 0.96 Yes 43 55.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68886255 + NM_133509 RAD51B 0 . . . 2.4 74.52 28 4.91 No 8 0.15 No 0 0 No -31 0.6 No 50 57.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108175520 + NM_000051 ATM 0 . . . 1.83 79.64 24 4.85 No 61 0.36 No 0 0 No -24 0.7 Yes 25 69.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56812000 + NM_058216 RAD51C 0 . . . 0.66 0 23 6.33 Yes 45 0.78 Yes 0 0 No -23 0.73 Yes 13 97.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68505394 + NM_133509 RAD51B 0 . . . 0.15 57.12 22 5.28 No 29 -3.57 No 0 0 No -50 0.9 Yes 43 63.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68898606 + NM_133509 RAD51B 0 . . . 5.09 63.85 19 5 No 47 -2.49 No 0 0 No -23 0.48 No 31 64.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68363431 + NM_133509 RAD51B 0 . . . 0.49 0 21 5.19 No 0 0.05 No 0 0 No -20 0.86 Yes 42 67.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152356991 - NM_005431 XRCC2 0 . . . 2.67 72.63 33 5.4 No 72 0.66 No 0 0 No -32 0.91 Yes 48 68.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40994192 + NM_001164269 RAD51 0 . . . 0.11 72.25 21 4.36 No 33 1.05 Yes 0 0 No -20 0.76 Yes 25 79.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68287265 + NM_133509 RAD51B 0 . . . 5.98 76.8 23 5.1 No 45 1.69 Yes 0 0 No -22 0.78 Yes 37 37.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47674545 + NM_000251 MSH2 0 . . . 3.47 77.15 22 5.9 Yes 51 1.14 Yes 0 0 No -22 0.51 No 49 73.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68948841 + NM_133509 RAD51B 0 . . . 0.85 72.47 22 3.94 No 5 0.6 No 0 0 No -20 0.48 No 39 67.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104171501 - NM_001100119 XRCC3 0 . . . 0.37 74.72 18 4.4 No 62 -3.42 No 0 0 No -22 0.57 No 48 43.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59883810 - NM_032043 BRIP1 0 . . . 4.36 79.44 23 5.6 Yes 15 0.15 No 0 0 No -26 0.68 Yes 43 59.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37059857 + NM_000249 MLH1 0 . . . 3.27 67.62 22 5.09 No 33 0.72 No 0 0 No -29 0.63 No 55 38.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68863382 + NM_004360 CDH1 0 . . . 6.92 91.57 16 4.77 No 17 0.18 No 0 0 No -24 0.42 No 41 94.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29135090 - NM_001005735 CHEK2 0 . . . 3.25 80.12 28 5.29 No 8 1.06 Yes 0 0 No -27 0.55 No 50 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37071482 + NM_000249 MLH1 0 . . . 2.52 71.33 24 5.05 No 47 0.88 Yes 0 0 No -23 0.92 Yes 48 52.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59761883 - NM_032043 BRIP1 0 . . . 0.48 66.43 49 7.24 Yes 54 1.68 Yes 0 0 No -26 0.41 No 34 91.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68635178 + NM_133509 RAD51B 0 . . . 8.57 89.7 37 6.23 Yes 65 0.57 No 0 0 No -25 0.48 No 48 86.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215674970 - NM_000465 BARD1 0 . . . 4.6 90.9 15 5.18 No 66 -2.99 No 0 0 No -43 0.45 No 49 40.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37043019 + NM_000249 MLH1 0 . . . 0.58 66.16 17 7.7 Yes 73 -5.39 No 0 0 No -22 0.41 No 57 36.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41266905 - NM_007294 BRCA1 0 . . . 3.17 75.03 46 6.84 Yes 30 0.69 No 0 0 No -31 0.83 Yes 41 34.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68326802 + NM_133509 RAD51B 0 . . . 2.41 68.34 23 5.45 No 13 0.8 Yes 0 0 No -29 0.69 Yes 45 73.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41213480 - NM_007294 BRCA1 0 . . . 5.68 71.2 49 5.69 Yes 39 0.92 Yes 0 0 No -54 0.59 No 40 88.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94215474 - NM_005591 MRE11 0 . . . 3.29 73.06 28 5.1 No 61 -3.95 No 0 0 No -27 0.45 No 45 69.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90947198 - NM_002485 NBN 0 . . . 4.52 70.77 23 6.14 Yes 6 0.16 No 0 0 No -22 0.85 Yes 52 63.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68524606 + NM_133509 RAD51B 0 . . . 2.3 60.12 18 5.36 No 70 2.03 Yes 0 0 No -35 0.65 No 56 58.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90954621 - NM_002485 NBN 0 . . . 6.56 84.23 17 6.38 Yes 55 1.2 Yes 0 0 No -25 0.59 No 48 88.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105181055 + NM_021930 RINT1 0 . . . 1.2 67.36 28 7.68 Yes 34 0.91 Yes 0 0 No -27 0.85 Yes 56 28.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47696342 + NM_000251 MSH2 0 . . . 5.97 70.85 22 5.39 No 18 0.58 No 0 0 No -22 0.78 Yes 40 85.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152367328 - NM_005431 XRCC2 0 . . . 2.32 75.32 48 6.4 Yes 51 1.03 Yes 0 0 No -27 0.57 No 53 56.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23643380 - NM_024675 PALB2 0 . . . 4.26 76.8 45 6.63 Yes 19 1.28 Yes 0 0 No -34 0.59 No 39 80.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68321823 + NM_133509 RAD51B 0 . . . 2.1 72.33 43 6.55 Yes 15 -3.11 No 0 0 No -37 0.63 No 46 42.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108133735 + NM_000051 ATM 0 . . . 1.73 69.97 14 4.71 No 0 0.52 No 0 0 No -17 0.54 No 58 40 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89639566 + NM_000314 PTEN 0 . . . 3.56 72.72 21 4.9 No 19 1.07 Yes 0 0 No -20 0.85 Yes 47 77.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56776886 + NM_058216 RAD51C 0 . . . 1.1 72.48 24 5.28 No 43 1.06 Yes 0 0 No -23 0.82 Yes 47 60.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68835447 + NM_004360 CDH1 0 . . . 8.94 85.35 14 4.47 No 12 0.8 Yes 0 0 No -48 0.84 Yes 46 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108162319 + NM_000051 ATM 0 . . . 2.7 75.81 20 3.35 No 38 1.4 Yes 0 0 No -19 0.6 No 20 76.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215655197 - NM_000465 BARD1 0 . . . 8.97 83.23 20 3.87 No 11 -1.07 No 0 0 No -34 0.31 No 47 78.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37091488 + NM_000249 MLH1 0 . . . 1.99 81.55 25 5.56 Yes 64 1.03 Yes 0 0 No -27 0.54 No 45 69.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59840405 - NM_032043 BRIP1 0 . . . 2.31 0 22 4.72 No 21 1.55 Yes 0 0 No -23 0.77 Yes 40 76.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190658087 + NM_000534 PMS1 0 . . . 3.7 77.55 29 5.91 Yes 73 0.62 No 0 0 No -28 0.57 No 53 65.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68789582 + NM_004360 CDH1 0 . . . 0.04 0 20 4.35 No 38 1.32 Yes 0 0 No -23 0.8 Yes 63 20.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47747093 + NM_000251 MSH2 0 . . . 3.06 78.44 26 5.29 No 46 -3.88 No 0 0 No -25 0.83 Yes 50 67.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68926820 + NM_133509 RAD51B 0 . . . 6.59 81.49 38 5.5 No 49 1.21 Yes 0 0 No -24 0.53 No 44 76.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108217683 + NM_000051 ATM 0 . . . 0.89 70.13 35 6.69 Yes 35 0.64 No 0 0 No -26 0.51 No 52 30.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6024866 - NM_000535 PMS2 0 . . . 4.12 72.8 14 5.46 No 55 0.07 No 0 0 No -28 0.41 No 47 78.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68412647 + NM_133509 RAD51B 0 . . . 3.22 68.89 28 5.42 No -1 0.39 No 0 0 No -27 0.61 No 46 89.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108217346 + NM_000051 ATM 0 . . . 6.2 80.06 33 5.62 Yes 6 0.47 No 0 0 No -20 0.49 No 46 94.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6023925 - NM_000535 PMS2 0 . . . 0.71 68.17 15 5.09 No 71 0.74 No 0 0 No -27 0.75 Yes 48 82.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94162827 - NM_005591 MRE11 0 . . . 3.53 74.37 20 6.2 Yes 4 1.14 Yes 0 0 No -25 0.36 No 48 75.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68506774 + NM_133509 RAD51B 0 . . . 4.76 78.58 19 3.85 No 70 0.83 Yes 0 0 No -22 0.73 Yes 43 55.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59834954 - NM_032043 BRIP1 0 . . . 6.09 87.07 9 3.87 No 29 0.05 No 0 0 No -26 0.82 Yes 40 79.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215629079 - NM_000465 BARD1 0 . . . 6.12 83.1 15 5.29 No 7 1.34 Yes 0 0 No -21 0.43 No 51 86.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40999623 + NM_001164269 RAD51 0 . . . 1.41 84.22 15 4.64 No 76 1.48 Yes 0 0 No -21 0.63 No 50 63.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68600790 + NM_133509 RAD51B 0 . . . 4.94 77.54 12 3.82 No 72 1.16 Yes 0 0 No -31 0.6 No 44 55.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37085060 + NM_000249 MLH1 0 . . . 8.81 85.05 13 4.36 No 14 0.93 Yes 0 0 No -35 0.77 Yes 44 91.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59798251 - NM_032043 BRIP1 0 . . . 2.48 78.88 17 4.39 No 56 -3.84 No 0 0 No -27 0.45 No 43 46.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32927206 + NM_000059 BRCA2 0 . . . 1.24 0 22 4.64 No 14 0.45 No 0 0 No -27 0.57 No 40 82.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69018508 + NM_133509 RAD51B 0 . . . 9.35 81.29 26 5.39 No 26 0.77 No 0 0 No -25 0.83 Yes 25 24.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69063118 + NM_133509 RAD51B 0 . . . 0.41 72.71 17 5.51 No 7 0.89 Yes 0 0 No -24 0.6 No 38 53.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69026760 + NM_133509 RAD51B 0 . . . 2.43 72.89 19 4.58 No 55 -3.58 No 0 0 No -31 0.52 No 49 82.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68863733 + NM_133509 RAD51B 0 . . . 2.03 0 21 4.8 No 40 1.95 Yes 0 0 No -20 0.92 Yes 47 38.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68784814 + NM_133509 RAD51B 0 . . . 7.58 81.91 28 5.38 No 34 1.01 Yes 0 0 No -27 0.37 No 29 82.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68698501 + NM_133509 RAD51B 0 . . . 5.62 83.22 21 7.21 Yes 7 2.3 Yes 0 0 No -20 0.88 Yes 51 82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68591637 + NM_133509 RAD51B 0 . . . 3.56 80.22 18 4.92 No 58 -3.88 No 0 0 No -27 0.52 No 43 77.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69144772 + NM_133509 RAD51B 0 . . . 0.63 66.57 40 7.12 Yes 34 0.61 No 0 0 No -25 0.75 Yes 50 48.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152370277 - NM_005431 XRCC2 0 . . . 0.21 56.4 50 8.12 Yes 17 0.41 No 0 0 No -24 0.58 No 41 74.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68833534 + NM_133509 RAD51B 0 . . . 8.53 78.81 28 3.8 No 51 0.1 No 0 0 No -27 0.46 No 48 35.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108100166 + NM_000051 ATM 0 . . . 4.66 79.02 23 5.19 No 51 0.48 No 0 0 No -26 0.59 No 51 59.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68821028 + NM_133509 RAD51B 0 . . . 6.52 89.48 26 4.34 No 9 1.16 Yes 0 0 No -24 0.77 Yes 49 95.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68756521 + NM_133509 RAD51B 0 . . . 2.71 81.69 13 4.95 No 25 0.65 No 0 0 No -20 0.65 No 45 89.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68437610 + NM_133509 RAD51B 0 . . . 0.77 63.8 12 5.2 No 22 0.8 Yes 0 0 No -49 0.78 Yes 36 95.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32902931 + NM_000059 BRCA2 0 . . . 6.55 88.28 20 4.76 No 49 0.71 No 0 0 No -24 0.84 Yes 45 83.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94203474 - NM_005591 MRE11 0 . . . 4.23 69.93 21 5.59 Yes 10 0.56 No 0 0 No -20 0.47 No 44 96.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131907337 + NM_005732 RAD50 0 . . . 0.46 78.18 19 9.78 Yes -3 -0.43 No 0 0 No -35 0.68 Yes 61 32.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68589738 + NM_133509 RAD51B 0 . . . 4.08 79.81 17 4.75 No 74 1.57 Yes 0 0 No -20 0.89 Yes 49 58.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108221700 + NM_000051 ATM 0 . . . 0.57 67.32 21 5.1 No 46 1.11 Yes 0 0 No -20 0.68 Yes 41 61.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23623303 - NM_024675 PALB2 0 . . . 0.1 62.59 12 5.57 Yes 46 0.48 No 0 0 No -27 0.48 No 47 25.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90966356 - NM_002485 NBN 0 . . . 2.52 70.41 21 5.56 Yes 76 -6.37 No 0 0 No -20 0.84 Yes 51 50.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37082853 + NM_000249 MLH1 0 . . . 0.47 68.09 9 3.87 No 76 0.59 No 0 0 No -25 0.8 Yes 10 48.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69095642 + NM_133509 RAD51B 0 . . . 3.66 71.32 31 6.07 Yes 22 0.25 No 0 0 No -30 0.83 Yes 44 96.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108232324 + NM_000051 ATM 0 . . . 1.75 67.66 26 5.48 No 59 -4.44 No 0 0 No -25 0.6 No 38 23.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68304489 + NM_133509 RAD51B 0 . . . 1.94 73.4 22 4.53 No 11 0.34 No 0 0 No -42 0.54 No 47 80.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68856492 + NM_133509 RAD51B 0 . . . 7.56 78.21 15 4.22 No 7 0.77 Yes 0 0 No -14 0.74 Yes 45 86.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68809802 + NM_004360 CDH1 0 . . . 13.11 89.72 40 6.4 Yes 36 0.2 No 0 0 No -29 0.44 No 48 76.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68738928 + NM_133509 RAD51B 0 . . . 2.25 69.52 20 4.87 No 49 0.45 No 0 0 No -24 0.38 No 41 40.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90994200 - NM_002485 NBN 0 . . . 5.28 75.12 20 6.13 Yes 21 -3.48 No 0 0 No -23 0.55 No 51 33.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131957258 + NM_005732 RAD50 0 . . . 0.66 0 19 5.54 No 71 0.7 No 0 0 No -26 0.61 No 49 70.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23649184 - NM_024675 PALB2 0 . . . 3.84 82.88 18 5.15 No 8 0.45 No 0 0 No -31 0.57 No 50 94.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56804140 + NM_058216 RAD51C 0 . . . 1.37 69.92 18 4.64 No 64 0.18 No 0 0 No -21 0.85 Yes 46 27.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21990232 - NM_000077 CDKN2A 0 . . . 3.53 78.83 21 7.49 Yes 42 0.82 Yes 0 0 No -25 0.48 No 51 59.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68306501 + NM_133509 RAD51B 0 . . . 8.16 84.16 30 6.32 Yes -4 0.64 No 0 0 No -29 0.64 No 40 60.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68313241 + NM_133509 RAD51B 0 . . . 0.01 66.12 41 6.44 Yes 68 -0.22 No 0 0 No -36 0.33 No 44 32.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1208111 + NM_000455 STK11 0 . . . 0.39 0 23 5.07 No 22 0.52 No 0 0 No -30 0.83 Yes 35 75.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68331602 + NM_133509 RAD51B 0 . . . 1.65 75.28 17 5.05 No 8 0.65 No 0 0 No -22 0.48 No 49 32.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37080849 + NM_000249 MLH1 0 . . . 6.42 78.27 35 6.15 Yes 16 1.69 Yes 0 0 No -21 0.85 Yes 42 85.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6024223 - NM_000535 PMS2 0 . . . 0.42 74.73 39 6.96 Yes 33 1.21 Yes 0 0 No -33 0.61 No 25 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40989417 + NM_001164269 RAD51 0 . . . 1.08 84.22 22 6.08 Yes 33 1.44 Yes 0 0 No -26 0.5 No 25 39.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69085435 + NM_133509 RAD51B 0 . . . 2.42 76.58 26 6.16 Yes 51 0.72 No 0 0 No -25 0.72 Yes 45 36.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37059836 + NM_000249 MLH1 0 . . . 4.64 80.69 16 4.52 No 12 0.74 No 0 0 No -21 0.3 No 45 67.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190690757 + NM_000534 PMS1 0 . . . 0.06 72.05 16 4.69 No 63 -4.49 No 0 0 No -30 0.74 Yes 53 62.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108186399 + NM_000051 ATM 0 . . . 8.25 74.47 34 5.9 Yes 58 -2.12 No 0 0 No -28 0.46 No 42 46.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6043988 - NM_000535 PMS2 0 . . . 1.13 70.61 10 5.22 No 40 0.36 No 0 0 No -30 0.52 No 49 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56775925 + NM_058216 RAD51C 0 . . . 6.24 82.31 22 5.08 No 58 1.05 Yes 0 0 No -21 0.86 Yes 47 68.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32974104 + NM_000059 BRCA2 0 . . . 3.98 82.94 23 4.55 No 4 1.04 Yes 0 0 No -22 0.56 No 54 72.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59909771 - NM_032043 BRIP1 0 . . . 1.96 71.66 25 5.35 No 20 0.33 No 0 0 No -29 0.42 No 43 88.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68625392 + NM_133509 RAD51B 0 . . . 3.07 73.51 40 8.72 Yes 40 0.14 No 0 0 No -39 0.74 Yes 50 69.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21994053 - NM_000077 CDKN2A 0 . . . 3.1 76.63 28 5.29 No 0 0.37 No 32 0.26 Yes -27 0.81 Yes 50 59.03 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr17 41267326 - NM_007294 BRCA1 0 . . . 0.76 74.26 24 4.9 No 33 1.15 Yes 0 0 No -49 0.75 Yes 49 33.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41279199 - NM_007294 BRCA1 0 . . . 1.22 0 36 8.04 Yes 1 0.05 No 0 0 No -36 0.89 Yes 48 45.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68490957 + NM_133509 RAD51B 0 . . . 5.11 78.04 15 4.58 No 34 0.96 Yes 0 0 No -57 0.48 No 38 52.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68354337 + NM_133509 RAD51B 0 . . . 1.82 0 19 4.03 No 73 -1.94 No 0 0 No -18 0.51 No 46 90.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69058670 + NM_133509 RAD51B 0 . . . 7.39 76.32 22 6.71 Yes 75 1.55 Yes 0 0 No -21 0.96 Yes 42 45.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105205166 + NM_021930 RINT1 0 . . . 0.06 67.66 23 4.74 No 68 0.02 No 0 0 No -28 0.62 No 43 29.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59939164 - NM_032043 BRIP1 0 . . . 0.7 72.6 15 4.36 No 4 0.99 Yes 0 0 No -39 0.52 No 44 84.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68835035 + NM_004360 CDH1 0 . . . 2.37 83.04 28 5.38 No 33 0.94 Yes 0 0 No -27 0.85 Yes 46 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32920789 + NM_000059 BRCA2 0 . . . 1.6 71.82 20 4.69 No 30 1.23 Yes 0 0 No -25 0.72 Yes 13 54.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94195349 - NM_005591 MRE11 0 . . . 6.82 80.61 16 4.69 No 33 0.33 No 0 0 No -53 0.4 No 48 76.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29126745 - NM_001005735 CHEK2 0 . . . 1.08 84.22 24 5.46 No 33 1.57 Yes 0 0 No -23 0.7 Yes 25 82.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190694423 + NM_000534 PMS1 0 . . . 3.34 82.07 17 6.93 Yes 34 0.65 No 0 0 No -27 0.41 No 44 90.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68755205 + NM_133509 RAD51B 0 . . . 7.1 87 24 6.32 Yes 20 0.52 No 0 0 No -23 0.89 Yes 38 68.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94173394 - NM_005591 MRE11 0 . . . 5.7 84.53 17 5.23 No -1 1.13 Yes 0 0 No -21 0.53 No 42 77.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59798768 - NM_032043 BRIP1 0 . . . 1.21 63.8 21 5.03 No 48 0.65 No 0 0 No -20 0.62 No 42 56.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68812105 + NM_133509 RAD51B 0 . . . 4.63 66.56 9 4.35 No 45 -4.92 No 0 0 No -30 0.35 No 57 55.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68335411 + NM_133509 RAD51B 0 . . . 8.14 81.99 15 5.38 No 21 0.8 Yes 0 0 No -28 0.38 No 45 64.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6034091 - NM_000535 PMS2 0 . . . 6.13 80.47 13 5.5 No 6 -2.08 No 0 0 No -29 0.63 No 43 56.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108203644 + NM_000051 ATM 0 . . . 2.97 84.42 17 4.24 No 11 0.11 No 0 0 No -35 0.84 Yes 47 95.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59859817 - NM_032043 BRIP1 0 . . . 2.38 0 20 4.32 No 47 0.65 No 0 0 No -19 0.43 No 22 85.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75489752 - NM_001040108 MLH3 0 . . . 2.18 57.16 25 5.99 Yes 14 -2.4 No 26 0.69 Yes -24 0.57 No 60 24.17 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 108208489 + NM_000051 ATM 0 . . . 1.06 59.8 37 7.47 Yes 30 0.34 No 0 0 No -36 0.48 No 56 39.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94227863 - NM_005591 MRE11 0 . . . 3.48 65.14 28 5.64 Yes 67 0.1 No 0 0 No -27 0.66 Yes 42 48.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41269083 - NM_007294 BRCA1 0 . . . 3.16 74.25 19 6 Yes 63 0.88 Yes 0 0 No -29 0.45 No 41 77.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69021012 + NM_133509 RAD51B 0 . . . 2.33 71.67 13 4.78 No 4 1.63 Yes 0 0 No -20 0.41 No 45 83.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68794022 + NM_004360 CDH1 0 . . . 3.11 84.41 28 5.16 No 4 0.52 No 0 0 No -24 0.4 No 34 49.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69050567 + NM_133509 RAD51B 0 . . . 1.92 69.95 22 5.04 No 55 -4.59 No 0 0 No -26 0.73 Yes 44 44.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41273535 - NM_007294 BRCA1 0 . . . 1.87 80.12 13 4.91 No 6 0.99 Yes 0 0 No -26 0.6 No 52 57.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152368133 - NM_005431 XRCC2 0 . . . 1.9 80.12 28 5.66 Yes 7 0.72 No 0 0 No -27 0.74 Yes 46 63.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68314498 + NM_133509 RAD51B 0 . . . 7.26 72.33 16 4.58 No 76 0.29 No 0 0 No -7 0.22 No 38 49.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37034390 + NM_000249 MLH1 0 . . . 2.72 77.46 21 5.66 Yes 56 1.89 Yes 0 0 No -20 0.81 Yes 44 21.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68847569 + NM_004360 CDH1 0 . . . 1.51 69.03 18 4.9 No 48 -1.34 No 0 0 No -17 0.29 No 46 77.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37055822 + NM_000249 MLH1 0 . . . 0.62 71.92 31 5.71 Yes 69 -3.55 No 0 0 No -30 0.86 Yes 39 65.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190655813 + NM_000534 PMS1 0 . . . 10.79 92.17 31 6.56 Yes 15 1.13 Yes 0 0 No -30 0.55 No 43 81.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68288977 + NM_133509 RAD51B 0 . . . 2.95 71.97 32 6.33 Yes 32 -1.23 No 0 0 No -32 0.55 No 46 82.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59886957 - NM_032043 BRIP1 0 . . . 2.9 71.51 28 5.74 Yes 76 0.62 No 0 0 No -27 0.92 Yes 45 62.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68820455 + NM_133509 RAD51B 0 . . . 5.63 79.29 14 6.08 Yes 13 1.16 Yes 0 0 No -21 0.67 Yes 45 78.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56782739 + NM_058216 RAD51C 0 . . . 5.54 93.17 22 5.74 Yes 49 0.03 No 0 0 No -21 0.87 Yes 49 43.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997921 + NM_001164269 RAD51 0 . . . 5.79 84.22 19 4.87 No 8 1.32 Yes 0 0 No -23 0.56 No 50 93.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69076881 + NM_133509 RAD51B 0 . . . 0.4 76.95 14 5.29 No 17 1.42 Yes 0 0 No -23 0.63 No 41 68.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69087678 + NM_133509 RAD51B 0 . . . 8.24 82.74 9 5.39 No 10 0.76 No 0 0 No -24 0.63 No 44 45.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21980394 - NM_000077 CDKN2A 0 . . . 1.12 75.6 25 5 No 3 0.1 No 0 0 No -58 0.6 No 50 45.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68495529 + NM_133509 RAD51B 0 . . . 6.67 84.22 59 9.43 Yes 75 -3.61 No 0 0 No -31 0.84 Yes 48 73.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131953464 + NM_005732 RAD50 0 . . . 4.4 75.46 32 5.83 Yes 45 0.24 No 0 0 No -31 0.92 Yes 48 62.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69089056 + NM_133509 RAD51B 0 . . . 4.45 81.41 35 6.4 Yes 29 -3.12 No 0 0 No -34 0.89 Yes 44 83.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68920018 + NM_133509 RAD51B 0 . . . 1.84 0 23 5.32 No 76 0.37 No 0 0 No -22 0.8 Yes 45 45.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47740662 + NM_000251 MSH2 0 . . . 4.52 75.32 32 5.56 Yes 21 1.16 Yes 0 0 No -24 0.41 No 37 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190660050 + NM_000534 PMS1 0 . . . 0.87 62.85 33 5.12 No 76 -5.86 No 0 0 No -21 0.76 Yes 48 13.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68615357 + NM_133509 RAD51B 0 . . . 5.81 74.2 35 5.34 No 5 1.06 Yes 0 0 No -23 0.42 No 38 72.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1209147 + NM_000455 STK11 0 . . . 0.51 70.45 16 5.81 Yes 70 -2.65 No 0 0 No -25 0.55 No 44 74.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68787715 + NM_133509 RAD51B 0 . . . 11.56 88.26 27 5.57 Yes 9 1.51 Yes 0 0 No -26 0.91 Yes 38 80.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94170097 - NM_005591 MRE11 0 . . . 3.45 76.21 13 4.89 No -1 1.27 Yes 0 0 No -22 0.93 Yes 51 37.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37058793 + NM_000249 MLH1 0 . . . 0.04 71.94 41 6.55 Yes 12 0.18 No 0 0 No -29 0.58 No 43 76.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59827528 - NM_032043 BRIP1 0 . . . 0.29 69.85 19 4.05 No 41 -3.33 No 0 0 No -18 0.34 No 59 16.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69097596 + NM_133509 RAD51B 0 . . . 4.45 81.6 9 5.01 No 23 1.01 Yes 0 0 No -21 0.86 Yes 48 53.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69047580 + NM_133509 RAD51B 0 . . . 5.92 85.03 93 3.96 No 70 2.44 Yes 0 0 No -31 0.46 No 45 75.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21984195 - NM_000077 CDKN2A 0 . . . 1.35 75.76 25 5.54 No 62 0.2 No 0 0 No -24 0.75 Yes 47 86.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108107327 + NM_000051 ATM 0 . . . 1.5 62.47 34 8.15 Yes 71 0.27 No 0 0 No -33 0.69 Yes 45 46.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29097637 - NM_001005735 CHEK2 0 . . . 4.55 76.22 36 6.62 Yes 11 1.3 Yes 0 0 No -22 0.5 No 38 75.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68392904 + NM_133509 RAD51B 0 . . . 5.79 81.5 32 5.83 Yes 64 0.04 No 0 0 No -31 0.93 Yes 36 90.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47706053 + NM_000251 MSH2 0 . . . 1.83 79.69 22 4.53 No 7 1.16 Yes 0 0 No -21 0.84 Yes 51 81.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69131367 + NM_133509 RAD51B 0 . . . 2.49 82.96 20 4.12 No 14 1.19 Yes 0 0 No -53 0.51 No 44 93.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152369660 - NM_005431 XRCC2 0 . . . 2.87 88.43 23 4.91 No 54 1.16 Yes 0 0 No -26 0.76 Yes 50 84.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108147607 + NM_000051 ATM 0 . . . 4.31 85.28 28 5.7 Yes 41 -2.71 No 0 0 No -27 0.88 Yes 46 63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68289709 + NM_133509 RAD51B 0 . . . 1.78 62.04 28 4.11 No 25 0.97 Yes 0 0 No -27 0.51 No 48 33.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37092040 + NM_000249 MLH1 0 . . . 0.8 72.93 35 4.22 No 65 1.44 Yes 0 0 No -34 0.57 No 45 45.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21995219 - NM_000077 CDKN2A 0 . . . 2.15 58.14 28 4.61 No 66 -3.53 No 0 0 No -20 0.52 No 22 19.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190647150 + NM_000534 PMS1 0 . . . 4.56 74.34 29 5.8 Yes 75 1.67 Yes 0 0 No -28 0.77 Yes 49 47.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68602077 + NM_133509 RAD51B 0 . . . 1.98 63.12 12 4.24 No 23 1.4 Yes 0 0 No -28 0.42 No 35 53.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48030873 + NM_000179 MSH6 0 . . . 2.12 74 19 3.9 No 30 0.56 No 0 0 No -47 0.48 No 45 44.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68777830 + NM_004360 CDH1 0 . . . 2.96 68.41 14 5 No 34 1.34 Yes 0 0 No -22 0.69 Yes 51 64.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32960904 + NM_000059 BRCA2 0 . . . 2.5 78.56 13 6.38 Yes 72 1.29 Yes 0 0 No -34 0.53 No 50 69.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131913411 + NM_005732 RAD50 0 . . . 6.64 79.48 23 5.36 No 8 0.88 Yes 0 0 No -22 0.69 Yes 39 86.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68770417 + NM_004360 CDH1 0 . . . 2.35 80.31 18 6.48 Yes 64 -5.23 No 0 0 No -22 0.63 No 42 49.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37048920 + NM_000249 MLH1 0 . . . 5.97 80.28 17 5.98 Yes 5 0.69 No 0 0 No -29 0.89 Yes 52 52.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215647219 - NM_000465 BARD1 0 . . . 3.77 62.85 23 4.78 No 75 1.22 Yes 0 0 No -22 0.64 No 41 50.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29100886 - NM_001005735 CHEK2 0 . . . 2.11 72.91 18 4.12 No 21 0.56 No 0 0 No -28 0.91 Yes 37 70.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69139246 + NM_133509 RAD51B 0 . . . 1.77 73.45 14 4.47 No 55 0.14 No 0 0 No -18 0.55 No 14 31.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69128643 + NM_133509 RAD51B 0 . . . 3.43 83.05 11 4.57 No 56 0.65 No 0 0 No -54 0.27 No 52 59.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59875412 - NM_032043 BRIP1 0 . . . 5.85 72.96 43 4.6 No 33 0.09 No 0 0 No -25 0.78 Yes 46 51.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45798188 - NM_001048171 MUTYH 0 . . . 3.61 0 23 4.87 No 38 0.97 Yes 23 0.95 Yes -22 0.59 No 20 69.15 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 69055256 + NM_133509 RAD51B 0 . . . 4.73 81.88 27 5.73 Yes 64 0.89 Yes 0 0 No -26 0.82 Yes 51 51.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59870308 - NM_032043 BRIP1 0 . . . 6.59 81.72 23 5.32 No -4 0.86 Yes 0 0 No -22 0.56 No 52 87.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32893288 + NM_000059 BRCA2 0 . . . 5.45 84.37 18 4.9 No -3 0.44 No 0 0 No -17 0.39 No 47 66.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1219429 + NM_000455 STK11 0 . . . 3.57 69.94 36 8.1 Yes NA NA NA 0 0 No -36 0.51 No 49 23.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68578699 + NM_133509 RAD51B 0 . . . 4.35 67.63 24 6.29 Yes 36 0.69 No 0 0 No -23 0.95 Yes 22 83.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29111230 - NM_001005735 CHEK2 0 . . . 5.6 82.13 30 5.38 No 19 0.47 No 0 0 No -29 0.89 Yes 50 75.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6029235 - NM_000535 PMS2 0 . . . 0.57 0 27 5.2 No 61 0.6 No 0 0 No -26 0.42 No 44 53.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108213200 + NM_000051 ATM 0 . . . 4.65 73.25 23 4.84 No 29 1.19 Yes 0 0 No -22 0.8 Yes 48 81.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59810432 - NM_032043 BRIP1 0 . . . 2.24 0 13 5.1 No 71 -5.83 No 0 0 No -26 0.75 Yes 52 68.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215618371 - NM_000465 BARD1 0 . . . 9.65 87.47 29 5.43 No 48 1.54 Yes 0 0 No -28 0.75 Yes 38 77.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105176971 + NM_021930 RINT1 0 . . . 6 77.26 35 6.27 Yes -3 0.43 No 21 0.85 Yes -35 0.7 Yes 42 57.36 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 41269295 - NM_007294 BRCA1 0 . . . 6.43 85.61 45 7.83 Yes 4 1.21 Yes 0 0 No -26 0.81 Yes 54 59.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23631367 - NM_024675 PALB2 0 . . . 0.85 74.47 14 4.47 No 65 1.07 Yes 0 0 No -26 0.83 Yes 54 69.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68716507 + NM_133509 RAD51B 0 . . . 0.45 68.93 22 5 No 71 -4.45 No 0 0 No -33 0.33 No 52 74.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33448160 - NM_002878 RAD51D 0 . . . 0.81 75.82 31 5.62 Yes 35 0.6 No 0 0 No -57 0.62 No 52 63.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68569379 + NM_133509 RAD51B 0 . . . 2.18 0 29 4.55 No -3 0.34 No 0 0 No -26 0.87 Yes 24 50.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68799141 + NM_004360 CDH1 0 . . . 7.8 84.41 28 5.29 No 46 0.62 No 0 0 No -27 0.89 Yes 12 76.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152363069 - NM_005431 XRCC2 0 . . . 2.17 78.9 28 4.78 No 53 0.67 No 0 0 No -20 0.77 Yes 47 34.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215654528 - NM_000465 BARD1 0 . . . 3.79 0 27 5.2 No 29 1.03 Yes 0 0 No -20 0.47 No 50 52.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68809824 + NM_004360 CDH1 0 . . . 3.6 70.34 25 5.07 No 58 0.19 No 0 0 No -18 0.61 No 26 73.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215592485 - NM_000465 BARD1 0 . . . 5.26 81.41 49 7.64 Yes 7 0.45 No 0 0 No -20 0.55 No 42 64.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68706271 + NM_133509 RAD51B 0 . . . 1.53 67.35 22 5.2 No 72 1.08 Yes 0 0 No -17 0.34 No 18 90.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69148499 + NM_133509 RAD51B 0 . . . 5.14 73.33 23 4.92 No 47 1.52 Yes 0 0 No -22 0.69 Yes 48 94.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68563186 + NM_133509 RAD51B 0 . . . 8.1 90.46 89 9.64 Yes 13 1 Yes 0 0 No -33 0.63 No 44 79.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108241084 + NM_000051 ATM 0 . . . 3.34 76.36 19 5.57 Yes 57 1.21 Yes 0 0 No -23 0.77 Yes 37 64.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32888596 + NM_000059 BRCA2 0 . . . 2.25 71.62 23 5.33 No 33 0.44 No 0 0 No -22 0.73 Yes 52 75.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29135945 - NM_001005735 CHEK2 0 . . . 3.42 70.85 59 7.82 Yes 21 1.71 Yes 0 0 No -33 0.63 No 37 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69103470 + NM_133509 RAD51B 0 . . . 0.72 75.17 33 5.73 Yes 52 0.89 Yes 0 0 No -26 0.47 No 44 52.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68291305 + NM_133509 RAD51B 0 . . . 2.32 0 13 3.71 No 17 1.13 Yes 0 0 No -24 0.34 No 52 56.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69025687 + NM_133509 RAD51B 0 . . . 5.14 77.53 58 9.87 Yes 36 1.37 Yes 0 0 No -27 0.71 Yes 40 64.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47639188 + NM_000251 MSH2 0 . . . 2.36 72.46 12 3.96 No 63 1.18 Yes 0 0 No -42 0.5 No 44 67.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68867262 + NM_004360 CDH1 0 . . . 3.56 76.29 42 7.49 Yes 36 1.65 Yes 0 0 No -34 0.26 No 40 84.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59843095 - NM_032043 BRIP1 0 . . . 2.68 66.62 41 6.37 Yes 49 0.3 No 0 0 No -54 0.69 Yes 51 55.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48005648 + NM_000179 MSH6 0 . . . 0.4 78.44 23 5.28 No -4 0.44 No 0 0 No -23 0.9 Yes 62 60.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68865821 + NM_004360 CDH1 0 . . . 7.05 84.5 22 6.17 Yes 22 0.73 No 0 0 No -25 0.69 Yes 42 93.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131960961 + NM_005732 RAD50 0 . . . 5.2 85.02 18 4.8 No 5 1.23 Yes 0 0 No -21 0.54 No 53 78.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69113730 + NM_133509 RAD51B 0 . . . 3.56 77.29 79 9.24 Yes 7 0.44 No 0 0 No -42 0.61 No 47 95.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94198257 - NM_005591 MRE11 0 . . . 4.67 80.28 15 5.39 No 14 0.66 No 0 0 No -46 0.51 No 40 92.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47685258 + NM_000251 MSH2 0 . . . 3.27 72.33 17 4.8 No 67 0.82 Yes 0 0 No -20 0.57 No 41 65.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68815567 + NM_004360 CDH1 0 . . . 7.87 95.69 15 4.58 No 5 0.4 No 0 0 No -18 0.51 No 45 73.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41211235 - NM_007294 BRCA1 0 . . . 2.41 68.34 26 5.64 Yes 23 1.56 Yes 0 0 No -25 0.74 Yes 45 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1218928 + NM_000455 STK11 0 . . . 2.87 72.82 30 6.38 Yes 3 0.66 No 0 0 No -29 0.73 Yes 55 36.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108125911 + NM_000051 ATM 0 . . . 3.1 73 21 4.9 No 32 -3.19 No 0 0 No -20 0.93 Yes 45 56.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56809008 + NM_058216 RAD51C 0 . . . 3.94 84.28 30 5.97 Yes 63 0.13 No 0 0 No -29 0.96 Yes 43 35.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108185629 + NM_000051 ATM 0 . . . 2.75 72.55 30 4.86 No 12 0.13 No 0 0 No -29 0.83 Yes 45 56.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47754142 + NM_000251 MSH2 0 . . . 3.1 78.85 45 6.78 Yes 61 0.55 No 0 0 No -23 0.52 No 17 29.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69061308 + NM_133509 RAD51B 0 . . . 0.87 68.84 18 4.51 No 60 0.29 No 0 0 No -23 0.38 No 50 58.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68685629 + NM_133509 RAD51B 0 . . . 2.4 66.58 15 6.08 Yes 62 -5.54 No 0 0 No -33 0.43 No 46 75.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68796888 + NM_133509 RAD51B 0 . . . 3.35 70.88 28 4.22 No 74 -4.64 No 0 0 No -27 0.87 Yes 51 77.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41270081 - NM_007294 BRCA1 0 . . . 5.91 71.39 15 5.29 No 20 1.95 Yes 0 0 No -25 0.55 No 38 88.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68847271 + NM_133509 RAD51B 0 . . . 7.73 81.78 24 6.07 Yes 58 0.15 No 0 0 No -23 0.72 Yes 48 46.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69077630 + NM_133509 RAD51B 0 . . . 6.17 84.24 34 4.48 No -3 0.89 Yes 0 0 No -20 0.65 No 44 83.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75498132 - NM_001040108 MLH3 0 . . . 6.01 78.06 30 6.32 Yes 40 1.08 Yes 0 0 No -33 0.64 No 42 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68496820 + NM_133509 RAD51B 0 . . . 9.08 90.12 22 4.54 No 15 0.71 No 0 0 No -28 0.42 No 47 67.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21985131 - NM_000077 CDKN2A 0 . . . 2.75 76.43 45 7.37 Yes 23 0.08 No 0 0 No -44 0.6 No 40 50.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68784705 + NM_133509 RAD51B 0 . . . 6.39 76.88 18 7.11 Yes 39 -2.46 No 0 0 No -23 0.44 No 43 81.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68991041 + NM_133509 RAD51B 0 . . . 1.99 77.69 38 7.39 Yes 76 -5.29 No 0 0 No -37 0.61 No 51 65.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68488135 + NM_133509 RAD51B 0 . . . 0.27 0 24 5.25 No 35 0.84 Yes 0 0 No -23 0.6 No 46 71.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69141092 + NM_133509 RAD51B 0 . . . 10.06 91.69 78 7.81 Yes 76 0.02 No 0 0 No -50 0.5 No 46 50.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69015009 + NM_133509 RAD51B 0 . . . 9.85 88.18 14 5.2 No 18 1.51 Yes 0 0 No -18 0.35 No 40 96.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47749431 + NM_000251 MSH2 0 . . . 2.36 67.77 28 4.7 No 68 0.32 No 0 0 No -27 0.84 Yes 53 51.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68814517 + NM_004360 CDH1 0 . . . 10.12 92.04 13 3.75 No 74 0.77 No 0 0 No -38 0.47 No 42 85.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59933193 - NM_032043 BRIP1 0 . . . 7.61 87.48 32 4.8 No 19 1.13 Yes 0 0 No -31 0.53 No 39 76.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68835659 + NM_133509 RAD51B 0 . . . 8.36 87.8 31 5.73 Yes 10 0.88 Yes 0 0 No -30 0.78 Yes 48 54.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68806043 + NM_004360 CDH1 0 . . . 1.51 68.52 44 6.82 Yes 43 2.07 Yes 0 0 No -26 0.62 No 22 49.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6016993 - NM_000535 PMS2 0 . . . 1.65 77.61 16 4.3 No 34 0.99 Yes 0 0 No -51 0.61 No 35 95.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68986895 + NM_133509 RAD51B 0 . . . 5.57 87.39 12 4.2 No 18 0.36 No 0 0 No -15 0.55 No 43 46.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108234079 + NM_000051 ATM 0 . . . 10.61 91 23 4.76 No 56 1.39 Yes 0 0 No -22 0.79 Yes 41 82.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190731279 + NM_000534 PMS1 0 . . . 2.38 0 15 6.07 Yes 2 0.66 No 0 0 No -33 0.75 Yes 45 47.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29108256 - NM_001005735 CHEK2 0 . . . 2.75 84.56 26 4.47 No 55 1.45 Yes 19 0.67 Yes -26 0.46 No 41 54.6 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 69090257 + NM_133509 RAD51B 0 . . . 2.67 70.13 45 6.86 Yes 16 0.49 No 0 0 No -44 0.87 Yes 48 86.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68579117 + NM_133509 RAD51B 0 . . . 5.36 0 30 5.77 Yes 66 0.41 No 0 0 No -24 0.64 No 48 45.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68754916 + NM_133509 RAD51B 0 . . . 3.38 82.31 71 8.13 Yes 64 0.61 No 0 0 No -26 0.57 No 50 72.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104175470 - NM_001100119 XRCC3 0 . . . 5.19 82.63 29 5.4 No 37 2.07 Yes 0 0 No -28 0.77 Yes 46 74.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59905524 - NM_032043 BRIP1 0 . . . 7.66 80.4 27 5.57 Yes 39 0.64 No 0 0 No -27 0.84 Yes 42 74.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69089553 + NM_133509 RAD51B 0 . . . 5.7 70.69 33 5.96 Yes 59 0.46 No 0 0 No -32 0.63 No 40 55.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41216728 - NM_007294 BRCA1 0 . . . 2.86 73.61 28 6.16 Yes 3 0.78 Yes 0 0 No -27 0.77 Yes 42 60.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47770969 + NM_000251 MSH2 0 . . . 1.83 66.43 42 6.06 Yes 57 0.41 No 0 0 No -19 0.72 Yes 45 80.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68676197 + NM_133509 RAD51B 0 . . . 3.61 70.94 13 4.79 No 66 1.33 Yes 0 0 No -18 0.7 Yes 46 63.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68963758 + NM_133509 RAD51B 0 . . . 1.5 64.17 18 4.9 No 21 0.49 No 0 0 No -45 0.5 No 34 39.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68607912 + NM_133509 RAD51B 0 . . . 8.93 87.74 17 4.57 No 8 0.83 Yes 0 0 No -28 0.5 No 50 95.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69083157 + NM_133509 RAD51B 0 . . . 4.03 81.85 31 3.61 No 56 0.05 No 0 0 No -21 0.35 No 39 83.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68382554 + NM_133509 RAD51B 0 . . . 0.85 77.47 18 5.74 Yes 29 1.08 Yes 0 0 No -20 0.75 Yes 42 75.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131914523 + NM_005732 RAD50 0 . . . 2.62 71.41 22 5.02 No 62 1.56 Yes 0 0 No -21 0.56 No 50 33.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68583832 + NM_133509 RAD51B 0 . . . 3.96 70.68 53 8.12 Yes 7 1.16 Yes 0 0 No -52 0.65 No 35 56.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104167625 - NM_001100119 XRCC3 0 . . . 4.07 76.83 25 4.98 No 53 -4.95 No 0 0 No -21 0.46 No 49 36.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108131025 + NM_000051 ATM 0 . . . 2.82 70.85 22 6.56 Yes 23 1.59 Yes 0 0 No -30 0.23 No 40 64.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48013658 + NM_000179 MSH6 0 . . . 3 75.16 31 5.92 Yes 7 0.96 Yes 0 0 No -31 0.58 No 51 70.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108092539 + NM_000051 ATM 0 . . . 1.33 73.82 34 7.51 Yes 42 -1.46 No 0 0 No -28 0.89 Yes 47 96.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68436442 + NM_133509 RAD51B 0 . . . 3.2 62.22 13 4.28 No 37 0.39 No 0 0 No -20 0.7 Yes 53 47.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68657125 + NM_133509 RAD51B 0 . . . 4.13 57.66 16 5.09 No 75 0.79 Yes 0 0 No -22 0.9 Yes 42 27.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59915603 - NM_032043 BRIP1 0 . . . 4.58 77.94 14 4.47 No 6 0.5 No 0 0 No -29 0.62 No 41 78.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215630879 - NM_000465 BARD1 0 . . . 1.41 67.89 29 7.35 Yes 75 -6.3 No 0 0 No -28 0.81 Yes 49 90.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59849996 - NM_032043 BRIP1 0 . . . 2.16 85.08 23 6.63 Yes 23 1.14 Yes 0 0 No -48 0.65 No 51 35.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52441547 - NM_004656 BAP1 0 . . . 1.44 74.08 54 7.75 Yes 47 -1.31 No 0 0 No -51 0.41 No 12 64.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68504437 + NM_133509 RAD51B 0 . . . 1.45 0 23 4.36 No 29 -2.39 No 0 0 No -22 0.92 Yes 19 44.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215628663 - NM_000465 BARD1 0 . . . 7.59 75.46 31 6.23 Yes 35 0.15 No 0 0 No -30 0.42 No 44 45.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131911982 + NM_005732 RAD50 0 . . . 4.24 79.89 12 4.69 No 40 -3.53 No 0 0 No -42 0.85 Yes 50 31.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68732820 + NM_133509 RAD51B 0 . . . 4.22 66.33 19 4.37 No 36 0.96 Yes 0 0 No -41 0.56 No 44 91.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68576553 + NM_133509 RAD51B 0 . . . 4.16 68.96 21 5.86 Yes 37 1 Yes 0 0 No -20 0.82 Yes 32 51.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94169767 - NM_005591 MRE11 0 . . . 7.41 88.37 19 5.81 Yes 59 0.84 Yes 0 0 No -25 0.61 No 49 45.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94204674 - NM_005591 MRE11 0 . . . 6.6 79.11 21 4.47 No 0 1.11 Yes 0 0 No -20 0.78 Yes 50 68.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68810268 + NM_133509 RAD51B 0 . . . 3.19 75.17 21 5.03 No 27 -3.58 No 0 0 No -20 0.76 Yes 50 39.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68972592 + NM_133509 RAD51B 0 . . . 2.63 76.98 15 4.58 No 37 -2.21 No 0 0 No -19 0.59 No 52 57.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59765538 - NM_032043 BRIP1 0 . . . 6.71 82.55 26 6.07 Yes 6 2.16 Yes 0 0 No -25 0.59 No 45 73.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68949357 + NM_133509 RAD51B 0 . . . 3.14 68.43 25 5.4 No 18 0.49 No 0 0 No -29 0.65 No 40 58.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108222248 + NM_000051 ATM 0 . . . 5.25 81 39 4.39 No 23 0.41 No 0 0 No -29 0.81 Yes 50 89.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68812161 + NM_004360 CDH1 0 . . . 0.76 74.26 28 5.62 Yes 33 1.02 Yes 0 0 No -56 0.32 No 20 71.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21970004 - NM_000077 CDKN2A 0 . . . 0.2 67.57 16 7.27 Yes -3 0.19 No 0 0 No -43 0.24 No 48 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68317029 + NM_133509 RAD51B 0 . . . 5.11 76.94 11 5 No 34 -2.23 No 0 0 No -25 0.25 No 53 61.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190741600 + NM_000534 PMS1 0 . . . 6.76 74 33 5.38 No 54 1.43 Yes 0 0 No -26 0.66 No 41 89.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41196592 - NM_007294 BRCA1 0 . . . 3.73 68.56 17 5.29 No 49 0.49 No 0 0 No -21 0.59 No 41 82.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68337862 + NM_133509 RAD51B 0 . . . 0.91 76.72 31 4.93 No 47 -4.51 No 0 0 No -30 0.72 Yes 51 20.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47751266 + NM_000251 MSH2 0 . . . 3.76 73.01 19 5 No 66 0.94 Yes 0 0 No -21 0.41 No 47 88.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105205101 + NM_021930 RINT1 0 . . . 3.41 70.36 31 6.08 Yes 57 0.19 No 0 0 No -24 0.4 No 43 63.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89629915 + NM_000314 PTEN 0 . . . 1.11 65.44 21 5.07 No 36 0.45 No 0 0 No -45 0.66 No 48 75.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59860880 - NM_032043 BRIP1 0 . . . 2.09 68.8 35 6.39 Yes 11 1.15 Yes 0 0 No -34 0.76 Yes 47 47.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68415171 + NM_133509 RAD51B 0 . . . 1.92 77.91 17 5.38 No 10 -0.87 No 0 0 No -30 0.58 No 42 65.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32888506 + NM_000059 BRCA2 0 . . . 2.15 73.91 33 6.3 Yes 18 1.15 Yes 0 0 No -25 0.57 No 40 96.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32962885 + NM_000059 BRCA2 0 . . . 3.12 82.98 19 5.48 No -2 0.2 No 0 0 No -18 0.56 No 46 77.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68591076 + NM_133509 RAD51B 0 . . . 6.36 86.83 34 5.89 Yes 41 0.79 Yes 0 0 No -28 0.78 Yes 49 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190710169 + NM_000534 PMS1 0 . . . 1.39 73.69 54 6.64 Yes 74 0.4 No 0 0 No -37 0.44 No 48 40.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59857498 - NM_032043 BRIP1 0 . . . 0.26 76.33 19 4.55 No 65 -5.63 No 0 0 No -18 0.6 No 42 37.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21973494 - NM_000077 CDKN2A 0 . . . 1.26 66.64 28 5 No 72 -6.03 No 0 0 No -20 0.61 No 52 46.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40993805 + NM_001164269 RAD51 0 . . . 2.38 72.5 14 5.91 Yes 22 1.22 Yes 0 0 No -17 0.45 No 55 41.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68361959 + NM_133509 RAD51B 0 . . . 3.68 75.51 26 6.96 Yes 76 -2.54 No 0 0 No -25 0.92 Yes 44 82.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68837484 + NM_004360 CDH1 0 . . . 1.96 73.58 12 5.83 Yes 6 0.98 Yes 0 0 No -27 0.77 Yes 41 60.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59831406 - NM_032043 BRIP1 0 . . . 2.94 70.28 23 4.99 No 71 -5.66 No 0 0 No -48 0.81 Yes 49 51.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104173612 - NM_001100119 XRCC3 0 . . . 6.53 79.69 36 7.33 Yes 4 1.76 Yes 0 0 No -35 0.72 Yes 54 70.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59924958 - NM_032043 BRIP1 0 . . . 6.36 84.14 40 7.81 Yes 5 0.87 Yes 0 0 No -39 0.46 No 47 76.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190730017 + NM_000534 PMS1 0 . . . 5.65 82.07 22 5.2 No 3 0.45 No 0 0 No -22 0.55 No 48 64.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648291 - NM_024675 PALB2 0 . . . 1.2 68.57 32 5.98 Yes 55 1.68 Yes 0 0 No -31 0.59 No 48 35.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68892309 + NM_133509 RAD51B 0 . . . 4.77 67.47 41 7.85 Yes 20 1.33 Yes 0 0 No -24 0.62 No 38 69.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68944030 + NM_133509 RAD51B 0 . . . 5.3 86.17 62 9.12 Yes 29 0.59 No 0 0 No -36 0.75 Yes 29 62.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68844287 + NM_133509 RAD51B 0 . . . 0.52 68.86 24 5.29 No 1 0.49 No 0 0 No -23 0.82 Yes 12 39.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68782050 + NM_133509 RAD51B 0 . . . 5.6 84.78 32 6 Yes 7 0.27 No 0 0 No -31 0.72 Yes 51 46.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89667026 + NM_000314 PTEN 0 . . . 1.05 59.43 28 5.37 No 43 0.86 Yes 0 0 No -27 0.39 No 47 39.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68471163 + NM_133509 RAD51B 0 . . . 0.1 0 23 4.8 No 54 0.04 No 0 0 No -22 0.43 No 45 70.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1228262 + NM_000455 STK11 0 . . . 3.84 78.24 11 3.71 No 26 1.9 Yes 0 0 No -33 0.43 No 43 32.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32930298 + NM_000059 BRCA2 0 . . . 1.41 84.22 22 5.17 No 33 1.49 Yes 0 0 No -22 0.43 No 25 45.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108234588 + NM_000051 ATM 0 . . . 2.04 70.34 14 5.29 No 42 1.49 Yes 0 0 No -30 0.53 No 40 77.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89653224 + NM_000314 PTEN 0 . . . 0.4 0 21 5.2 No 62 0.29 No 0 0 No -41 0.64 No 43 48.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68857369 + NM_004360 CDH1 0 . . . 1.22 61.34 14 4.47 No 42 -4.07 No 0 0 No -19 0.42 No 44 35.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47795984 + NM_000251 MSH2 0 . . . 2.4 68.37 25 4.8 No 28 0.91 Yes 0 0 No -24 0.93 Yes 30 71.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68580724 + NM_133509 RAD51B 0 . . . 0.15 68.96 29 5.86 Yes 18 1.17 Yes 0 0 No -28 0.78 Yes 23 46.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84381596 - NM_139076 FAM175A 0 . . . 0.54 64.86 23 4.9 No 67 0.99 Yes 0 0 No -22 0.95 Yes 49 25.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190674848 + NM_000534 PMS1 0 . . . 1.28 66.54 28 5.66 Yes -3 1.24 Yes 0 0 No -27 0.58 No 23 41.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131975102 + NM_005732 RAD50 0 . . . 0.31 0 25 5.2 No 45 -3.5 No 0 0 No -24 0.87 Yes 44 69.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69109561 + NM_133509 RAD51B 0 . . . 4.33 68.68 36 7.3 Yes 40 0.34 No 0 0 No -37 0.79 Yes 40 76.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68771893 + NM_004360 CDH1 0 . . . 3.55 73.27 23 5.23 No 69 -2.52 No 0 0 No -23 0.36 No 45 81.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41019953 + NM_001164269 RAD51 0 . . . 5.91 91.88 23 4.8 No 9 0.38 No 0 0 No -22 0.52 No 39 94.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47683791 + NM_000251 MSH2 0 . . . 6.02 71.58 62 6.75 Yes 19 1.49 Yes 0 0 No -34 0.62 No 46 69.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68596882 + NM_133509 RAD51B 0 . . . 0.11 0 22 5.29 No 15 0.75 No 0 0 No -21 0.69 Yes 43 78.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190654926 + NM_000534 PMS1 0 . . . 1.34 80.19 21 5.19 No 3 1.1 Yes 0 0 No -20 0.57 No 49 84.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59802266 - NM_032043 BRIP1 0 . . . 7.24 90.32 18 4.78 No 10 1.5 Yes 0 0 No -22 0.26 No 48 94.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68530943 + NM_133509 RAD51B 0 . . . 1.77 71.8 45 7.62 Yes 56 1.02 Yes 0 0 No -35 0.65 No 17 67.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84400922 - NM_139076 FAM175A 0 . . . 5.09 88.38 16 4.69 No 2 1.3 Yes 0 0 No -30 0.53 No 44 34.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68979569 + NM_133509 RAD51B 0 . . . 3.98 83.52 16 4.94 No 54 -2.83 No 0 0 No -21 0.54 No 46 76.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69014543 + NM_133509 RAD51B 0 . . . 9.09 86.52 18 4.33 No 0 1.56 Yes 0 0 No -23 0.57 No 46 92.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47781428 + NM_000251 MSH2 0 . . . 6.86 81.26 22 5.73 Yes -4 0.33 No 0 0 No -21 0.77 Yes 41 37.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68706866 + NM_133509 RAD51B 0 . . . 1.46 69.12 19 3.59 No 42 0.41 No 0 0 No -24 0.8 Yes 40 75.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41241940 - NM_007294 BRCA1 0 . . . 0.27 70.06 24 4.9 No 59 1.02 Yes 0 0 No -23 0.71 Yes 42 94.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68400406 + NM_133509 RAD51B 0 . . . 10.8 92.44 17 6.08 Yes 76 1.41 Yes 0 0 No -16 0.79 Yes 41 93.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69059963 + NM_133509 RAD51B 0 . . . 3.83 68.43 27 5.99 Yes 57 0.7 No 0 0 No -29 0.71 Yes 46 79.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94208935 - NM_005591 MRE11 0 . . . 2.07 0 59 8.54 Yes 26 0.92 Yes 0 0 No -40 0.64 No 40 63.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68417314 + NM_133509 RAD51B 0 . . . 3.43 62.24 76 6.76 Yes 31 0.47 No 0 0 No -27 0.89 Yes 48 55.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47679114 + NM_000251 MSH2 0 . . . 3.71 67.99 23 4.65 No 45 0.7 No 0 0 No -56 0.53 No 49 77.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131916251 + NM_005732 RAD50 0 . . . 3.37 76.18 32 6.16 Yes 0 0.99 Yes 0 0 No -31 0.82 Yes 42 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41244830 - NM_007294 BRCA1 0 . . . 0.1 58.65 19 4.79 No 9 -1.36 No 0 0 No -24 0.71 Yes 49 29.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68815231 + NM_004360 CDH1 0 . . . 5.38 86.1 19 5 No 52 1.03 Yes 0 0 No -25 0.41 No 48 43.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68954881 + NM_133509 RAD51B 0 . . . 3.15 75.16 33 5.47 No -2 0.23 No 0 0 No -25 0.31 No 60 46.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59793169 - NM_032043 BRIP1 0 . . . 4.98 66.48 27 5.47 No 37 0.48 No 0 0 No -26 0.92 Yes 47 49.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89723840 + NM_000314 PTEN 0 . . . 3.92 80.49 17 4.68 No 56 1.34 Yes 0 0 No -24 0.52 No 48 92.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108189967 + NM_000051 ATM 0 . . . 0.31 61.49 20 5.61 Yes 64 0.22 No 0 0 No -19 0.4 No 20 21.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41228899 - NM_007294 BRCA1 0 . . . 5.38 93.36 16 5.23 No 70 0.34 No 0 0 No -30 0.24 No 52 67.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648014 - NM_024675 PALB2 0 . . . 3.27 59.04 25 5.35 No 25 0.01 No 0 0 No -24 0.81 Yes 33 79.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29085874 - NM_001005735 CHEK2 0 . . . 3.89 79.55 39 7.48 Yes 11 0.02 No 0 0 No -25 0.66 No 47 88.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68720437 + NM_133509 RAD51B 0 . . . 5.95 90.13 40 6.2 Yes 14 0.42 No 0 0 No -25 0.86 Yes 36 62.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68856258 + NM_133509 RAD51B 0 . . . 6.58 83.23 36 7.54 Yes 12 0.44 No 0 0 No -35 0.7 Yes 46 67.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59910382 - NM_032043 BRIP1 0 . . . 7.8 76.15 28 5.38 No 30 1.04 Yes 0 0 No -27 0.72 Yes 43 42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68607213 + NM_133509 RAD51B 0 . . . 2.29 77.11 19 7.06 Yes 6 0.59 No 0 0 No -31 0.51 No 46 42.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94217203 - NM_005591 MRE11 0 . . . 3.26 81.14 16 4.47 No 36 1.49 Yes 0 0 No -36 0.39 No 22 80.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215669529 - NM_000465 BARD1 0 . . . 0.94 57.62 28 8.13 Yes 13 0.52 No 0 0 No -40 0.72 Yes 45 77.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33441101 - NM_002878 RAD51D 0 . . . 0.26 72.26 26 5.45 No 30 1.05 Yes 0 0 No -26 0.47 No 28 68.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68850714 + NM_004360 CDH1 0 . . . 2.86 73.96 32 5.25 No 26 0.79 Yes 0 0 No -25 0.83 Yes 50 37.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47671383 + NM_000251 MSH2 0 . . . 7.59 74.15 20 4.8 No 71 -3.32 No 0 0 No -19 0.87 Yes 41 68.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68569681 + NM_133509 RAD51B 0 . . . 5.67 80.68 15 4.16 No 74 -4.95 No 0 0 No -15 0.31 No 45 41.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59811108 - NM_032043 BRIP1 0 . . . 1.82 61.82 22 4.79 No 76 0.26 No 0 0 No -21 0.86 Yes 42 73.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68415088 + NM_133509 RAD51B 0 . . . 3.82 78.29 25 5.38 No 65 0.45 No 0 0 No -22 0.87 Yes 42 68.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68707782 + NM_133509 RAD51B 0 . . . 1.71 63.16 26 5.1 No 74 1.02 Yes 0 0 No -25 0.5 No 45 79.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69116700 + NM_133509 RAD51B 0 . . . 2.08 76.29 32 5.66 Yes 28 1.43 Yes 0 0 No -27 0.58 No 30 61.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215599586 - NM_000465 BARD1 0 . . . 0.25 63.9 17 4.8 No 18 0.9 Yes 0 0 No -36 0.39 No 40 73.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37061491 + NM_000249 MLH1 0 . . . 0.2 80.49 23 5.35 No 35 1.69 Yes 0 0 No -22 0.91 Yes 23 85.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215650783 - NM_000465 BARD1 0 . . . 3.64 68.75 60 7.29 Yes 68 -2.14 No 0 0 No -28 0.59 No 49 36.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23614367 - NM_024675 PALB2 0 . . . 0.79 0 33 5.8 Yes 67 -3.89 No 0 0 No -32 0.56 No 52 34.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69096027 + NM_133509 RAD51B 0 . . . 6.55 80.57 36 5.92 Yes 2 0.43 No 0 0 No -32 0.24 No 48 87.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68699566 + NM_133509 RAD51B 0 . . . 2.54 66.4 17 4.8 No 68 1.93 Yes 0 0 No -22 0.57 No 32 66.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68967677 + NM_133509 RAD51B 0 . . . 5.59 82.3 15 5.39 No 51 -1.78 No 0 0 No -14 0.23 No 46 76.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59852545 - NM_032043 BRIP1 0 . . . 2.94 71.81 22 5.87 Yes 33 0.01 No 0 0 No -28 0.87 Yes 41 84.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69018010 + NM_133509 RAD51B 0 . . . 6.68 78.49 14 4.43 No 45 1.37 Yes 0 0 No -17 0.42 No 46 56.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68724287 + NM_133509 RAD51B 0 . . . 0.75 61.43 23 5.91 Yes 75 0.3 No 0 0 No -22 0.86 Yes 45 89.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41229719 - NM_007294 BRCA1 0 . . . 2.49 77.08 35 6.39 Yes 6 0.02 No 0 0 No -34 0.75 Yes 47 29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33444231 - NM_002878 RAD51D 0 . . . 5.21 80.78 29 6.31 Yes 29 -3 No 0 0 No -28 0.79 Yes 41 92.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32940047 + NM_000059 BRCA2 0 . . . 4.31 74.56 21 6.53 Yes 45 0.77 Yes 0 0 No -20 0.65 No 13 66.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69044894 + NM_133509 RAD51B 0 . . . 0.18 70.93 33 7.39 Yes 4 0.08 No 0 0 No -32 0.73 Yes 54 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68996851 + NM_133509 RAD51B 0 . . . 5.14 81.61 31 5.83 Yes 5 0.78 Yes 0 0 No -27 0.65 No 47 53.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68733632 + NM_133509 RAD51B 0 . . . 1.5 63.8 20 5.66 Yes 67 -2.8 No 0 0 No -19 0.3 No 42 34.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23639700 - NM_024675 PALB2 0 . . . 0.37 59.1 25 4.67 No 58 -4.61 No 0 0 No -24 0.51 No 42 45.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68706884 + NM_133509 RAD51B 0 . . . 3.59 73.7 20 5 No 60 0.41 No 0 0 No -18 0.47 No 48 71.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68848251 + NM_133509 RAD51B 0 . . . 0.29 61.21 15 4.58 No 27 0.62 No 0 0 No -20 0.48 No 44 14.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59902478 - NM_032043 BRIP1 0 . . . 3.25 80.12 24 6.08 Yes 75 1.2 Yes 0 0 No -23 0.66 No 50 82.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56810134 + NM_058216 RAD51C 0 . . . 2.7 72.26 36 5.91 Yes 31 0.79 Yes 0 0 No -23 0.69 Yes 58 49.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21975792 - NM_000077 CDKN2A 0 . . . 7.44 76.06 12 6.4 Yes 75 -4.87 No 0 0 No -24 0.63 No 49 85.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104175850 - NM_001100119 XRCC3 0 . . . 5.57 88.46 23 5.83 Yes 0 1.16 Yes 0 0 No -22 0.75 Yes 46 78.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68828555 + NM_133509 RAD51B 0 . . . 3.82 70.73 31 6 Yes 34 -0.67 No 0 0 No -27 0.46 No 48 76.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41009066 + NM_001164269 RAD51 0 . . . 1.03 75.93 19 5.38 No 30 1.19 Yes 0 0 No -18 0.45 No 28 52.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59895711 - NM_032043 BRIP1 0 . . . 2.81 63.34 43 7.41 Yes 27 0.53 No 0 0 No -42 0.67 Yes 31 52.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89731120 + NM_000314 PTEN 0 . . . 3.22 88.1 16 5.18 No 75 0.1 No 0 0 No -21 0.67 Yes 45 85.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59839537 - NM_032043 BRIP1 0 . . . 3.25 78.94 12 4.41 No -2 1 Yes 0 0 No -29 0.33 No 37 75.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41201436 - NM_007294 BRCA1 0 . . . 0.14 61.47 21 4.33 No 42 0.59 No 0 0 No -20 0.43 No 16 38.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108146938 + NM_000051 ATM 0 . . . 1.31 0 21 4.69 No 76 1.49 Yes 0 0 No -20 0.87 Yes 34 93.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190700070 + NM_000534 PMS1 0 . . . 0.98 80.71 23 4.8 No 4 1.04 Yes 0 0 No -22 0.86 Yes 48 66.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40988117 + NM_001164269 RAD51 0 . . . 4.88 88.36 18 4.69 No 49 0.4 No 0 0 No -45 0.71 Yes 44 64.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90988311 - NM_002485 NBN 0 . . . 1.99 85.55 17 5.6 Yes 62 -5.15 No 0 0 No -32 0.41 No 51 78.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68828574 + NM_133509 RAD51B 0 . . . 3.6 85.02 28 5.62 Yes 4 1.05 Yes 0 0 No -27 0.89 Yes 49 78.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108168213 + NM_000051 ATM 0 . . . 7.73 80.02 20 4.9 No 26 0.32 No 0 0 No -52 0.51 No 45 62.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68334658 + NM_133509 RAD51B 0 . . . 1.26 70.53 49 5.78 Yes 42 -3.97 No 0 0 No -21 0.85 Yes 52 46.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190720781 + NM_000534 PMS1 0 . . . 0.1 0 13 4.36 No 26 1.5 Yes 0 0 No -15 0.26 No 32 89.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131901276 + NM_005732 RAD50 0 . . . 4.41 86.88 31 5.48 No 27 1.08 Yes 0 0 No -25 0.42 No 49 74.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37040704 + NM_000249 MLH1 0 . . . 4.45 69.24 13 4.24 No 54 0.91 Yes 0 0 No -28 0.82 Yes 48 91.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29088601 - NM_001005735 CHEK2 0 . . . 1.06 72.36 14 4.9 No 34 0.78 Yes 0 0 No -24 0.51 No 24 63.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23614438 - NM_024675 PALB2 0 . . . 1.62 0 27 5.74 Yes 54 0.36 No 0 0 No -27 0.52 No 38 64.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68357347 + NM_133509 RAD51B 0 . . . 5.13 70.44 25 5.34 No 55 2.12 Yes 0 0 No -24 0.64 No 26 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56804666 + NM_058216 RAD51C 0 . . . 4.75 85.02 33 6.08 Yes 3 1.35 Yes 0 0 No -25 0.58 No 44 59.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68790076 + NM_133509 RAD51B 0 . . . 1.69 71.36 11 5 No 28 0.63 No 0 0 No -42 0.47 No 49 46.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68756218 + NM_133509 RAD51B 0 . . . 3.79 72.99 28 6.22 Yes 70 -2.62 No 0 0 No -27 0.7 Yes 44 30.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68396112 + NM_133509 RAD51B 0 . . . 4.82 72.71 17 4.8 No 51 0.62 No 0 0 No -25 0.32 No 34 36.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68762614 + NM_133509 RAD51B 0 . . . 6.03 70.99 27 5.7 Yes 64 -3.54 No 0 0 No -26 0.73 Yes 43 80.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152362150 - NM_005431 XRCC2 0 . . . 2.99 78.63 12 4.9 No 53 1.88 Yes 0 0 No -27 0.71 Yes 54 73.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69071043 + NM_133509 RAD51B 0 . . . 0.02 61.26 31 4.54 No 30 0.47 No 0 0 No -57 0.72 Yes 25 27.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69030383 + NM_133509 RAD51B 0 . . . 0.25 67.05 27 7.62 Yes 75 0.1 No 0 0 No -26 0.93 Yes 37 33.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69108188 + NM_133509 RAD51B 0 . . . 7.77 77.07 19 4.47 No 30 1.33 Yes 0 0 No -24 0.76 Yes 28 68.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215654613 - NM_000465 BARD1 0 . . . 6.55 76.62 33 8.14 Yes 37 0.96 Yes 0 0 No -32 0.47 No 39 43.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215599528 - NM_000465 BARD1 0 . . . 4.2 76.12 12 4.25 No 76 0.91 Yes 0 0 No -22 0.79 Yes 52 77.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90970585 - NM_002485 NBN 0 . . . 1.58 63.47 40 6.72 Yes 54 -1.55 No 0 0 No -30 0.37 No 37 92.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47793214 + NM_000251 MSH2 0 . . . 1.79 63.63 27 5.2 No 63 -4.82 No 0 0 No -57 0.66 No 47 53.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90962291 - NM_002485 NBN 0 . . . 6.21 81.83 36 5.82 Yes 67 0.18 No 0 0 No -25 0.58 No 46 62.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90977175 - NM_002485 NBN 0 . . . 2.24 80.12 39 6.06 Yes 7 1.02 Yes 0 0 No -38 0.72 Yes 42 79.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89672698 + NM_000314 PTEN 0 . . . 4.61 80.05 27 5.2 No 44 -2.99 No 0 0 No -26 0.73 Yes 49 49.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68285920 + NM_133509 RAD51B 0 . . . 4.89 71.93 25 7.44 Yes 57 0.83 Yes 0 0 No -24 0.94 Yes 45 62.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68372798 + NM_133509 RAD51B 0 . . . 0.82 0 17 6.08 Yes 66 0.14 No 0 0 No -16 0.76 Yes 41 93.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1208425 + NM_000455 STK11 0 . . . 4.71 84.22 34 6.24 Yes 33 1.04 Yes 0 0 No -22 0.62 No 50 90.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131918026 + NM_005732 RAD50 0 . . . 9.36 85.71 40 6.36 Yes 10 0.64 No 0 0 No -25 0.52 No 48 73.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47800340 + NM_000251 MSH2 0 . . . 6 74.43 28 5.2 No 10 0.82 Yes 0 0 No -37 0.68 Yes 48 65.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48013575 + NM_000179 MSH6 0 . . . 6.38 79.55 17 7.7 Yes 16 0.97 Yes 0 0 No -35 0.41 No 42 81.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59786458 - NM_032043 BRIP1 0 . . . 0.25 0 14 9.47 Yes 72 -5.61 No 0 0 No -30 0.86 Yes 55 35.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37069214 + NM_000249 MLH1 0 . . . 5.17 79.76 17 5.19 No 48 2.39 Yes 0 0 No -20 0.41 No 26 84.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190740712 + NM_000534 PMS1 0 . . . 1.24 63.61 26 6.62 Yes 73 -2.25 No 0 0 No -25 0.85 Yes 39 72.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68493546 + NM_133509 RAD51B 0 . . . 0.93 67.75 20 4.92 No 43 0.91 Yes 0 0 No -19 0.67 Yes 33 83.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68338093 + NM_133509 RAD51B 0 . . . 2.96 72.54 42 6.2 Yes 43 -2.23 No 0 0 No -36 0.5 No 51 56.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68338220 + NM_133509 RAD51B 0 . . . 0.3 74.92 30 6.82 Yes 75 -4.53 No 0 0 No -29 0.46 No 52 80.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59771898 - NM_032043 BRIP1 0 . . . 10.26 81.04 15 4.72 No 9 1.01 Yes 0 0 No -17 0.49 No 46 71.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69017487 + NM_133509 RAD51B 0 . . . 0.1 61.43 27 6.24 Yes 51 -4.29 No 0 0 No -26 0.95 Yes 47 80 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47726530 + NM_000251 MSH2 0 . . . 3.59 75.35 25 6 Yes 19 0.45 No 0 0 No -24 0.93 Yes 39 88.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37087721 + NM_000249 MLH1 0 . . . 2.81 70.56 18 5.91 Yes 44 1.43 Yes 0 0 No -22 0.62 No 14 51.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94182762 - NM_005591 MRE11 0 . . . 1.12 75.56 21 5.1 No 38 0.96 Yes 0 0 No -20 0.79 Yes 49 66.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68327403 + NM_133509 RAD51B 0 . . . 1.77 76.59 21 5.93 Yes 59 0.97 Yes 0 0 No -29 0.56 No 45 43.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68731002 + NM_133509 RAD51B 0 . . . 0.48 71.29 9 4.49 No 21 0.03 No 0 0 No -21 0.36 No 37 67.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69112059 + NM_133509 RAD51B 0 . . . 8.82 83.39 31 5.52 No 68 0.5 No 0 0 No -30 0.71 Yes 42 62.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32897211 + NM_000059 BRCA2 0 . . . 3.97 75.65 21 3.57 No 1 1.35 Yes 0 0 No -26 0.55 No 41 51.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215612148 - NM_000465 BARD1 0 . . . 4.72 64.76 15 5.1 No 47 0.39 No 0 0 No -20 0.43 No 48 63.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59934081 - NM_032043 BRIP1 0 . . . 3.01 75.24 18 3.95 No 55 0.75 No 0 0 No -22 0.27 No 48 70.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131952101 + NM_005732 RAD50 0 . . . 0.75 0 17 4.34 No 29 0.4 No 0 0 No -29 0.48 No 38 56.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68967350 + NM_133509 RAD51B 0 . . . 4.68 75.12 19 5.48 No 58 -4.62 No 0 0 No -23 0.54 No 43 65.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68841427 + NM_133509 RAD51B 0 . . . 0.53 0 22 5.21 No 12 -2.16 No 0 0 No -25 0.72 Yes 43 78.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131926476 + NM_005732 RAD50 0 . . . 0.29 0 20 6.48 Yes 23 1.3 Yes 0 0 No -19 0.7 Yes 39 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89628214 + NM_000314 PTEN 0 . . . 1.98 62.82 23 5.29 No 47 0.29 No 0 0 No -22 0.66 No 20 89.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68845052 + NM_004360 CDH1 0 . . . 1.03 73.09 21 4.95 No 61 0.82 Yes 0 0 No -21 0.33 No 54 74.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47800834 + NM_000251 MSH2 0 . . . 10.39 89.49 16 3.73 No 48 0.54 No 0 0 No -30 0.85 Yes 44 90.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68670492 + NM_133509 RAD51B 0 . . . 2 74.79 21 5.98 Yes 51 0.32 No 0 0 No -20 0.66 No 44 60.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68718870 + NM_133509 RAD51B 0 . . . 2.36 74.9 22 6.5 Yes 39 0.58 No 0 0 No -30 0.7 Yes 19 66.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152373839 - NM_005431 XRCC2 0 . . . 4.61 71.84 9 3.87 No 16 1.18 Yes 0 0 No -29 0.91 Yes 42 91.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75511465 - NM_001040108 MLH3 0 . . . 1.08 66.16 16 4.74 No 15 1.14 Yes 0 0 No -20 0.47 No 43 71.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40992641 + NM_001164269 RAD51 0 . . . 5.08 72.67 18 4.69 No 17 0.95 Yes 0 0 No -17 0.84 Yes 41 80.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131911880 + NM_005732 RAD50 0 . . . 1.75 75.66 15 4.58 No 71 1.4 Yes 0 0 No -57 0.47 No 40 51.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68406311 + NM_133509 RAD51B 0 . . . 4.55 74.41 16 4.92 No 7 0.42 No 0 0 No -20 0.72 Yes 45 77.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68704021 + NM_133509 RAD51B 0 . . . 3.96 68.05 31 5.04 No 17 0.2 No 0 0 No -30 0.54 No 38 54.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68350634 + NM_133509 RAD51B 0 . . . 5.32 86.49 52 8.32 Yes 49 0.21 No 0 0 No -54 0.39 No 41 62.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32970432 + NM_000059 BRCA2 0 . . . 1.51 0 31 5.57 Yes 71 0.77 No 0 0 No -28 0.52 No 39 35.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59853206 - NM_032043 BRIP1 0 . . . 2.21 79.93 34 6.83 Yes 57 -4.29 No 0 0 No -29 0.79 Yes 50 75.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68866801 + NM_004360 CDH1 0 . . . 0.39 69.25 14 6.37 Yes -3 0.13 No 0 0 No -21 0.53 No 61 39.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68593140 + NM_133509 RAD51B 0 . . . 0.25 0 18 4.83 No 30 0.45 No 0 0 No -17 0.39 No 20 49.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68643919 + NM_133509 RAD51B 0 . . . 0.23 51.83 24 5.48 No 65 -5.21 No 0 0 No -23 0.81 Yes 44 53.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68845927 + NM_133509 RAD51B 0 . . . 2.77 71.24 17 3.48 No 15 1.41 Yes 0 0 No -16 0.36 No 43 70.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68827679 + NM_133509 RAD51B 0 . . . 8.97 93.65 22 4.6 No 27 0.26 No 0 0 No -19 0.74 Yes 53 77.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7590885 - NM_000546 TP53 0 . . . 2.74 0 24 5.2 No 31 0.19 No 0 0 No -40 0.51 No 44 45.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68475348 + NM_133509 RAD51B 0 . . . 2.69 80.4 73 7.46 Yes 25 -3.02 No 0 0 No -31 0.58 No 50 43.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94197735 - NM_005591 MRE11 0 . . . 5.78 75.28 17 6.93 Yes 48 0.88 Yes 0 0 No -29 0.66 Yes 32 88.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68560139 + NM_133509 RAD51B 0 . . . 7.97 78.21 19 5.46 No 6 0.57 No 0 0 No -27 0.9 Yes 44 63.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68319798 + NM_133509 RAD51B 0 . . . 6.59 82.2 29 5.41 No 70 0.55 No 0 0 No -28 0.9 Yes 47 55.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37059357 + NM_000249 MLH1 0 . . . 5.5 84.38 12 5.79 Yes -2 0.81 Yes 0 0 No -26 0.55 No 41 48.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131892083 + NM_005732 RAD50 0 . . . 7.27 88.96 38 5.47 No 73 1.4 Yes 0 0 No -26 0.68 Yes 45 52.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41216074 - NM_007294 BRCA1 0 . . . 1.24 68.99 48 6.37 Yes 24 1.34 Yes 0 0 No -36 0.71 Yes 26 46.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69006857 + NM_133509 RAD51B 0 . . . 8.55 79.73 70 6.67 Yes 72 -2.18 No 0 0 No -25 0.49 No 48 93.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37044826 + NM_000249 MLH1 0 . . . 10.9 94.41 28 5.83 Yes 31 1.32 Yes 0 0 No -27 0.83 Yes 39 66.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32904828 + NM_000059 BRCA2 0 . . . 7.46 78.91 27 5.2 No 61 0.34 No 0 0 No -26 0.76 Yes 32 87.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104162221 - NM_001100119 XRCC3 0 . . . 1.3 69.15 20 5.89 Yes 33 0.49 No 0 0 No -19 0.62 No 25 44.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37051757 + NM_000249 MLH1 0 . . . 1.06 71.04 16 5.7 Yes 46 1.44 Yes 0 0 No -20 0.42 No 12 53.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108093022 + NM_000051 ATM 0 . . . 6.12 77.9 21 6.07 Yes 57 1.82 Yes 0 0 No -30 0.59 No 38 59.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32958791 + NM_000059 BRCA2 0 . . . 3.56 78.56 17 6.08 Yes -4 0.57 No 0 0 No -16 0.76 Yes 48 52.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47641027 + NM_000251 MSH2 0 . . . 3.8 80.12 24 4.54 No 37 1.44 Yes 0 0 No -28 0.63 No 51 55.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68398264 + NM_133509 RAD51B 0 . . . 5.72 90.92 20 5.53 No 55 0.23 No 0 0 No -25 0.9 Yes 43 54.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68584705 + NM_133509 RAD51B 0 . . . 3.62 70.01 12 4.69 No 35 0.4 No 0 0 No -15 0.2 No 27 62.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41011910 + NM_001164269 RAD51 0 . . . 3.27 65.65 20 7.24 Yes 56 1.23 Yes 0 0 No -19 0.46 No 42 74.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68812059 + NM_133509 RAD51B 0 . . . 4.57 70.98 17 4.69 No 74 -3.21 No 0 0 No -20 0.58 No 47 49.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69118100 + NM_133509 RAD51B 0 . . . 4.65 79.24 17 5.57 Yes 34 1.36 Yes 0 0 No -16 0.67 Yes 24 27.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37084847 + NM_000249 MLH1 0 . . . 2.13 71.33 26 5.44 No 36 0.58 No 0 0 No -25 0.83 Yes 48 45.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90955361 - NM_002485 NBN 0 . . . 2.73 0 25 5.38 No 8 0.42 No 0 0 No -22 0.65 No 50 85.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69058861 + NM_133509 RAD51B 0 . . . 1.46 59.26 21 6.78 Yes 8 1.04 Yes 0 0 No -20 0.88 Yes 13 17.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68795957 + NM_004360 CDH1 0 . . . 6.13 82.09 28 5.57 Yes 24 0.15 No 0 0 No -27 0.85 Yes 43 69.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47803729 + NM_000251 MSH2 0 . . . 0.48 65.31 25 4.73 No 55 0.11 No 0 0 No -22 0.75 Yes 48 85.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68677602 + NM_133509 RAD51B 0 . . . 6.42 83.34 36 6.11 Yes 69 0.33 No 0 0 No -20 0.58 No 42 54.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1217491 + NM_000455 STK11 0 . . . 1.59 0 17 6.93 Yes 42 0.79 Yes 0 0 No -30 0.39 No 52 15.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32962126 + NM_000059 BRCA2 0 . . . 2.78 68.5 37 4.63 No 73 0.87 Yes 0 0 No -36 0.81 Yes 28 27.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131903316 + NM_005732 RAD50 0 . . . 4.47 79.05 26 5.6 Yes 23 -2.12 No 0 0 No -25 0.52 No 54 67.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41262825 - NM_007294 BRCA1 0 . . . 3.93 79.78 34 4.07 No 70 1.55 Yes 0 0 No -24 0.57 No 49 72.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68478960 + NM_133509 RAD51B 0 . . . 6.72 72.35 18 5.74 Yes 74 1.16 Yes 0 0 No -26 0.62 No 37 30.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131900927 + NM_005732 RAD50 0 . . . 6.12 79.06 15 4.58 No 17 0.8 Yes 0 0 No -59 0.62 No 41 48.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190676616 + NM_000534 PMS1 0 . . . 0.45 57.21 19 5.15 No 63 0.31 No 0 0 No -25 0.78 Yes 46 79.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21982544 - NM_000077 CDKN2A 0 . . . 0.03 0 28 5.26 No 6 1.61 Yes 0 0 No -27 0.42 No 41 57.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23627551 - NM_024675 PALB2 0 . . . 2.16 64.05 21 5.18 No 74 -5.42 No 0 0 No -20 0.72 Yes 53 45.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47633885 + NM_000251 MSH2 0 . . . 5.47 75.08 28 7.66 Yes 39 0.52 No 0 0 No -27 0.55 No 38 63.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7568234 - NM_000546 TP53 0 . . . 3.5 72.04 17 4.69 No 13 0.41 No 0 0 No -39 0.55 No 42 68.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68432111 + NM_133509 RAD51B 0 . . . 11.17 86.52 27 7.62 Yes 73 1.71 Yes 0 0 No -26 0.45 No 45 86.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190672283 + NM_000534 PMS1 0 . . . 1.9 82.47 56 7.33 Yes 33 0.43 No 0 0 No -18 0.6 No 47 89.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84396341 - NM_139076 FAM175A 0 . . . 1 74.04 14 6.54 Yes 62 0.12 No 0 0 No -23 0.42 No 49 75.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68886520 + NM_133509 RAD51B 0 . . . 1.15 76.25 11 5.29 No 58 0.33 No 0 0 No -21 0.61 No 40 70.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68806723 + NM_133509 RAD51B 0 . . . 5.83 78.46 26 5.65 Yes 32 0.76 No 0 0 No -23 0.59 No 48 81.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68769583 + NM_133509 RAD51B 0 . . . 5.54 80.12 17 5.19 No 42 1.39 Yes 0 0 No -21 0.76 Yes 48 57.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29093407 - NM_001005735 CHEK2 0 . . . 3.61 63.59 19 5.25 No 27 0.06 No 0 0 No -22 0.74 Yes 35 67.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33441782 - NM_002878 RAD51D 0 . . . 0.76 0 19 5.57 Yes 33 0.35 No 0 0 No -24 0.57 No 51 40.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59862766 - NM_032043 BRIP1 0 . . . 6.02 91.17 30 5.58 Yes 11 0.6 No 0 0 No -27 0.6 No 47 91.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215619195 - NM_000465 BARD1 0 . . . 3.28 71.83 22 5.16 No -1 0.84 Yes 0 0 No -21 0.77 Yes 50 50.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68537218 + NM_133509 RAD51B 0 . . . 0.16 63.51 18 4.86 No 66 0.12 No 0 0 No -24 0.78 Yes 44 47.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190668562 + NM_000534 PMS1 0 . . . 3.07 72.16 24 4.95 No 62 0.95 Yes 0 0 No -24 0.53 No 48 73.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59824903 - NM_032043 BRIP1 0 . . . 2.21 79.22 35 7.34 Yes 63 1.4 Yes 0 0 No -38 0.43 No 50 61.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94215435 - NM_005591 MRE11 0 . . . 4.32 72.89 27 5.74 Yes 3 0.64 No 0 0 No -26 0.88 Yes 50 61.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37041156 + NM_000249 MLH1 0 . . . 2.48 81.23 20 4.58 No 51 0.74 No 0 0 No -19 0.91 Yes 34 76.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84408147 - NM_139076 FAM175A 0 . . . 4.84 79.14 44 6.86 Yes 6 1.79 Yes 0 0 No -40 0.73 Yes 35 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59879432 - NM_032043 BRIP1 0 . . . 5.86 78.99 44 6.63 Yes 60 -2.68 No 0 0 No -35 0.51 No 49 66.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68857118 + NM_133509 RAD51B 0 . . . 9.08 82.53 18 4.42 No 26 0.87 Yes 0 0 No -21 0.8 Yes 39 94.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68522706 + NM_133509 RAD51B 0 . . . 5.39 84.37 27 4.23 No 53 -1.82 No 0 0 No -24 0.64 No 40 92.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90947435 - NM_002485 NBN 0 . . . 7.99 84.87 16 5.18 No 72 0.97 Yes 0 0 No -23 0.53 No 49 74.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68974877 + NM_133509 RAD51B 0 . . . 6.03 82.17 28 5.39 No 22 1.41 Yes 0 0 No -27 0.82 Yes 44 60.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68661169 + NM_133509 RAD51B 0 . . . 3.87 86.96 28 6.14 Yes -4 0.06 No 0 0 No -27 0.58 No 47 61.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94202048 - NM_005591 MRE11 0 . . . 2.19 82.95 22 5.83 Yes 12 0.64 No 0 0 No -20 0.48 No 46 91.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68919705 + NM_133509 RAD51B 0 . . . 0.12 65.04 20 5.1 No 37 0.96 Yes 0 0 No -27 0.41 No 21 48.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89666645 + NM_000314 PTEN 0 . . . 0.61 69.24 32 5.21 No 76 0.14 No 0 0 No -31 0.65 No 51 40.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152370934 - NM_005431 XRCC2 0 . . . 2.86 84 24 4.79 No 2 1.5 Yes 0 0 No -47 0.85 Yes 19 42.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68853616 + NM_133509 RAD51B 0 . . . 2.36 69.06 22 5.1 No 62 -4.41 No 0 0 No -21 0.49 No 13 35.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215629930 - NM_000465 BARD1 0 . . . 0.48 67.19 13 5.74 Yes 51 -3.04 No 0 0 No -30 0.64 No 38 53.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90964432 - NM_002485 NBN 0 . . . 2.37 67.24 22 5 No 65 0.99 Yes 0 0 No -18 0.54 No 33 84.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68906576 + NM_133509 RAD51B 0 . . . 4.46 80.39 24 5.78 Yes 73 -6.66 No 0 0 No -27 0.77 Yes 44 78.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68739876 + NM_133509 RAD51B 0 . . . 0.45 0 19 6.6 Yes 51 1.44 Yes 0 0 No -18 0.45 No 33 60.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47630797 + NM_000251 MSH2 0 . . . 3.89 81.85 32 5.91 Yes 54 1.28 Yes 0 0 No -40 0.43 No 47 88.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68644472 + NM_133509 RAD51B 0 . . . 1.46 84.54 17 4.8 No -3 0.97 Yes 0 0 No -48 0.5 No 50 49.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68458993 + NM_133509 RAD51B 0 . . . 0.38 70.67 17 5.15 No 28 0.24 No 0 0 No -20 0.52 No 30 53.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75520061 - NM_001040108 MLH3 0 . . . 4.57 68.27 15 4.58 No 42 0.57 No 0 0 No -39 0.47 No 52 43.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68610943 + NM_133509 RAD51B 0 . . . 1.95 0 25 5.57 Yes 61 0.82 Yes 0 0 No -24 0.75 Yes 47 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6047100 - NM_000535 PMS2 0 . . . 3.65 74.18 16 5.57 Yes 15 -1.35 No 0 0 No -24 0.51 No 45 50.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215611026 - NM_000465 BARD1 0 . . . 0.22 0 13 3.79 No 13 1.45 Yes 0 0 No -26 0.37 No 45 85.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215635405 - NM_000465 BARD1 0 . . . 1.29 76.79 62 8.54 Yes 13 0.81 Yes 0 0 No -28 0.83 Yes 45 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68655740 + NM_133509 RAD51B 0 . . . 6.36 80.03 9 3.14 No 75 0.21 No 0 0 No -38 0.51 No 34 39.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69016314 + NM_133509 RAD51B 0 . . . 3.6 85.02 21 4.79 No 4 1.2 Yes 0 0 No -20 0.75 Yes 54 57.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47642314 + NM_000251 MSH2 0 . . . 9.36 88.77 14 4.9 No 75 1.21 Yes 0 0 No -17 0.34 No 41 52.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48032339 + NM_000179 MSH6 0 . . . 4.46 84.41 20 5.06 No 70 1.17 Yes 0 0 No -25 0.6 No 39 91.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41261877 - NM_007294 BRCA1 0 . . . 4.79 77.62 28 6.55 Yes 4 0.49 No 0 0 No -27 0.9 Yes 44 92.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68472681 + NM_133509 RAD51B 0 . . . 3.85 85.9 12 5 No 73 -3.84 No 0 0 No -48 0.56 No 48 51.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7569106 - NM_000546 TP53 0 . . . 0.61 84.41 17 5.74 Yes 62 -1.91 No 0 0 No -14 0.27 No 32 64.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59910931 - NM_032043 BRIP1 0 . . . 0.81 84.22 23 4.13 No 33 1.12 Yes 0 0 No -20 0.43 No 50 45.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215590414 - NM_000465 BARD1 0 . . . 2.32 72.09 20 5.47 No 68 0.84 Yes 0 0 No -25 0.64 No 49 44.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68804430 + NM_004360 CDH1 0 . . . 6.63 86.8 25 5.1 No 64 -3.82 No 0 0 No -24 0.67 Yes 55 40.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68860399 + NM_133509 RAD51B 0 . . . 1.99 0 23 5.39 No 47 0.92 Yes 0 0 No -22 0.53 No 52 63.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68324980 + NM_133509 RAD51B 0 . . . 0.45 66.79 11 4.12 No 37 0.28 No 0 0 No -23 0.63 No 21 54.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68996890 + NM_133509 RAD51B 0 . . . 0.74 65.1 27 6.38 Yes 44 0.72 No 0 0 No -26 0.97 Yes 46 52.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104167079 - NM_001100119 XRCC3 0 . . . 5.8 82.24 27 5.2 No 73 1.13 Yes 23 0.95 Yes -26 0.7 Yes 45 72 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68798160 + NM_133509 RAD51B 0 . . . 1.44 68.57 28 5.38 No 64 -2.84 No 0 0 No -27 0.79 Yes 40 64.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108162748 + NM_000051 ATM 0 . . . 10.11 86.84 32 4.02 No 12 1.21 Yes 0 0 No -27 0.71 Yes 39 63.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89684097 + NM_000314 PTEN 0 . . . 8.84 76.93 28 5.83 Yes 37 0.17 No 0 0 No -27 0.42 No 43 43.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68554210 + NM_133509 RAD51B 0 . . . 1.91 70.18 33 5.92 Yes 65 -5.52 No 0 0 No -28 0.54 No 43 95.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68358626 + NM_133509 RAD51B 0 . . . 3.43 68.67 26 5.42 No 67 -3.54 No 0 0 No -25 0.64 No 37 57.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29112451 - NM_001005735 CHEK2 0 . . . 0.35 66.86 14 4.47 No 52 1.59 Yes 0 0 No -34 0.41 No 54 87.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190650242 + NM_000534 PMS1 0 . . . 1.25 64.05 22 5.28 No 62 0.57 No 0 0 No -29 0.39 No 39 60.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183932 - NM_005591 MRE11 0 . . . 3.35 88.08 17 4.78 No 35 1.04 Yes 0 0 No -22 0.58 No 40 68.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68294367 + NM_133509 RAD51B 0 . . . 6.28 75.91 30 6.65 Yes 21 1.12 Yes 0 0 No -29 0.92 Yes 37 78.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59837999 - NM_032043 BRIP1 0 . . . 0.74 65.76 18 4.79 No 76 -1.05 No 0 0 No -24 0.5 No 39 80.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23633144 - NM_024675 PALB2 0 . . . 10.16 82.7 22 6.43 Yes 33 0.63 No 0 0 No -21 0.6 No 48 66.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94200322 - NM_005591 MRE11 0 . . . 5.74 73.22 19 5.77 Yes 2 1.18 Yes 0 0 No -18 0.65 No 47 42.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108112023 + NM_000051 ATM 0 . . . 0.31 77.81 12 6.8 Yes 29 0.99 Yes 0 0 No -20 0.43 No 29 60.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69016451 + NM_133509 RAD51B 0 . . . 4.08 74.53 23 5.37 No 70 0.9 Yes 0 0 No -25 0.6 No 32 63.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41255130 - NM_007294 BRCA1 0 . . . 3.17 68.24 12 4.24 No 5 1.18 Yes 0 0 No -30 0.93 Yes 41 75.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21984693 - NM_000077 CDKN2A 0 . . . 1.42 71.3 35 4.99 No 55 -4.72 No 0 0 No -24 0.31 No 49 74.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48022953 + NM_000179 MSH6 0 . . . 2.71 82.27 19 6.29 Yes 20 -3.72 No 0 0 No -23 0.93 Yes 39 58.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94219626 - NM_005591 MRE11 0 . . . 0.28 0 18 4.9 No 33 0.4 No 0 0 No -22 0.63 No 29 42.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215609314 - NM_000465 BARD1 0 . . . 0.61 0 23 4.6 No 18 0.78 Yes 0 0 No -22 0.71 Yes 40 82.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69050924 + NM_133509 RAD51B 0 . . . 3.79 77.21 17 5.59 Yes 5 2.19 Yes 0 0 No -26 0.79 Yes 43 93.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108120176 + NM_000051 ATM 0 . . . 2.57 71.27 12 4.52 No 66 -5.7 No 0 0 No -24 0.4 No 49 62.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68648743 + NM_133509 RAD51B 0 . . . 6.42 77.74 33 6.3 Yes 38 -1.81 No 0 0 No -29 0.6 No 45 46.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56774563 + NM_058216 RAD51C 0 . . . 3.58 69.44 22 4.88 No 75 0.06 No 0 0 No -33 0.34 No 36 41.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105203989 + NM_021930 RINT1 0 . . . 1.09 74.73 23 5.37 No 33 0.05 No 0 0 No -22 0.79 Yes 14 55.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108175964 + NM_000051 ATM 0 . . . 3.5 74.54 11 3.82 No 64 0.17 No 0 0 No -34 0.79 Yes 54 24.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152348865 - NM_005431 XRCC2 0 . . . 0.32 74.68 16 5.22 No 4 0.1 No 0 0 No -27 0.36 No 54 73.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59846564 - NM_032043 BRIP1 0 . . . 8.47 90.36 15 4.58 No 43 0.84 Yes 0 0 No -17 0.43 No 50 94.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41264417 - NM_007294 BRCA1 0 . . . 3.53 63.87 15 4.44 No 53 0.88 Yes 0 0 No -25 0.8 Yes 39 68.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68544424 + NM_133509 RAD51B 0 . . . 0.01 74.23 70 8.37 Yes 34 0.36 No 0 0 No -16 0.57 No 54 78.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68361519 + NM_133509 RAD51B 0 . . . 1.41 83.57 20 6.16 Yes 23 1.04 Yes 0 0 No -29 0.41 No 34 80.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131962674 + NM_005732 RAD50 0 . . . 4.55 72.54 22 5.88 Yes 10 1.79 Yes 0 0 No -29 0.54 No 42 92.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68657448 + NM_133509 RAD51B 0 . . . 3.57 69.51 32 5.97 Yes 5 1.95 Yes 0 0 No -36 0.35 No 42 57.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68464484 + NM_133509 RAD51B 0 . . . 6.97 81.16 17 4.8 No 46 1 Yes 0 0 No -48 0.27 No 47 83.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59823753 - NM_032043 BRIP1 0 . . . 5.29 77.02 12 5.38 No 72 -2.34 No 0 0 No -22 0.9 Yes 42 64.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68712366 + NM_133509 RAD51B 0 . . . 1.24 75.87 27 5.62 Yes 63 -4.57 No 0 0 No -31 0.61 No 50 74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68853687 + NM_133509 RAD51B 0 . . . 0.8 69.89 14 4.47 No 23 0.84 Yes 0 0 No -13 0.43 No 31 90.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56783714 + NM_058216 RAD51C 0 . . . 0.06 83.3 54 7.62 Yes 76 -5.14 No 0 0 No -53 0.4 No 45 42.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68633322 + NM_133509 RAD51B 0 . . . 1.35 73.84 21 5 No 55 0.28 No 0 0 No -24 0.7 Yes 43 56.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68466550 + NM_133509 RAD51B 0 . . . 6 80.2 28 5.65 Yes 49 0.37 No 0 0 No -28 0.54 No 48 59.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68374530 + NM_133509 RAD51B 0 . . . 1.8 72.41 28 5.26 No 63 -4.17 No 0 0 No -42 0.58 No 50 64.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68406885 + NM_133509 RAD51B 0 . . . 6.14 88.68 22 5.1 No 52 1.32 Yes 0 0 No -21 0.95 Yes 49 85.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32904594 + NM_000059 BRCA2 0 . . . 1.15 75.47 28 5.64 Yes 60 0.1 No 0 0 No -29 0.65 No 38 84.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33438011 - NM_002878 RAD51D 0 . . . 3.21 59.06 27 5.2 No 11 1.2 Yes 0 0 No -26 0.64 No 17 40.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56801971 + NM_058216 RAD51C 0 . . . 3.51 89.86 40 6.48 Yes 46 0.62 No 0 0 No -26 0.31 No 12 57.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32930835 + NM_000059 BRCA2 0 . . . 3.28 76.23 14 3.64 No 54 1.33 Yes 0 0 No -21 0.6 No 40 67.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59786848 - NM_032043 BRIP1 0 . . . 8.41 83.04 36 5.51 No 56 1.92 Yes 0 0 No -25 0.54 No 39 72.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190699870 + NM_000534 PMS1 0 . . . 8.23 81.76 14 4.53 No 5 0.53 No 0 0 No -25 0.53 No 43 38.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69049988 + NM_133509 RAD51B 0 . . . 0.99 0 16 5.18 No 13 1.12 Yes 0 0 No -21 0.65 No 45 75.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21974270 - NM_000077 CDKN2A 0 . . . 7.4 86.72 21 7.69 Yes 35 0.24 No 0 0 No -31 0.72 Yes 47 80.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1210110 + NM_000455 STK11 0 . . . 0.73 0 34 6.72 Yes 52 0.84 Yes 0 0 No -33 0.72 Yes 55 61.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33441419 - NM_002878 RAD51D 0 . . . 2.04 77.97 19 6.42 Yes 53 0.53 No 0 0 No -24 0.9 Yes 51 37.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29120227 - NM_001005735 CHEK2 0 . . . 3.25 77.63 21 6.65 Yes 9 1.08 Yes 0 0 No -36 0.8 Yes 44 62.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68850447 + NM_133509 RAD51B 0 . . . 1.45 0 9 3.87 No 55 0.41 No 0 0 No -39 0.4 No 16 45.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21983598 - NM_000077 CDKN2A 0 . . . 0.13 75.26 21 4.69 No 50 0.22 No 0 0 No -39 0.9 Yes 40 36.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68471510 + NM_133509 RAD51B 0 . . . 0.77 74.89 27 6.99 Yes 2 1.43 Yes 0 0 No -26 0.44 No 50 73.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190689647 + NM_000534 PMS1 0 . . . 3.63 79.32 24 4.69 No 7 0.9 Yes 0 0 No -23 0.74 Yes 47 65.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68554430 + NM_133509 RAD51B 0 . . . 1.81 63.99 29 5.57 Yes 5 0.29 No 0 0 No -28 0.96 Yes 46 54.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94177228 - NM_005591 MRE11 0 . . . 0.06 0 35 6.65 Yes 31 0.31 No 0 0 No -34 0.6 No 45 54.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41245896 - NM_007294 BRCA1 0 . . . 0.26 65.83 13 5.1 No 64 -5.41 No 0 0 No -23 0.27 No 48 64.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131956019 + NM_005732 RAD50 0 . . . 7.69 84.28 29 5.29 No 17 1.23 Yes 0 0 No -26 0.6 No 41 70.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68572454 + NM_133509 RAD51B 0 . . . 5.18 82.11 25 4.96 No 59 0.35 No 0 0 No -18 0.35 No 45 77.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47646173 + NM_000251 MSH2 0 . . . 8.18 83.7 28 5.2 No 31 0.45 No 0 0 No -18 0.45 No 27 92.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59883703 - NM_032043 BRIP1 0 . . . 6.66 80.32 15 4.86 No 54 1.08 Yes 0 0 No -26 0.41 No 47 54.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89646076 + NM_000314 PTEN 0 . . . 11.69 85.69 39 6.24 Yes 53 1.7 Yes 0 0 No -38 0.62 No 47 64.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94225764 - NM_005591 MRE11 0 . . . 2.13 69.31 27 5.74 Yes -4 0.68 No 0 0 No -29 0.45 No 43 60.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59931345 - NM_032043 BRIP1 0 . . . 6.33 69.26 32 6.16 Yes 59 0.81 Yes 0 0 No -33 0.8 Yes 50 48.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190652779 + NM_000534 PMS1 0 . . . 0.33 63.59 18 5.36 No 68 -5.49 No 0 0 No -26 0.7 Yes 46 48.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29082034 - NM_001005735 CHEK2 0 . . . 1.41 84.22 19 5 No 27 1.8 Yes 0 0 No -18 0.51 No 50 63.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69093756 + NM_133509 RAD51B 0 . . . 5.52 75.61 21 5.09 No 3 1.13 Yes 0 0 No -20 0.84 Yes 42 81.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47704504 + NM_000251 MSH2 0 . . . 2.67 78.25 28 5.38 No 17 0.74 No 0 0 No -27 0.87 Yes 41 73.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33445520 - NM_002878 RAD51D 0 . . . 5.55 76.41 37 6.31 Yes 73 0.71 No 0 0 No -35 0.3 No 47 45.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190682931 + NM_000534 PMS1 0 . . . 4.81 77.78 33 5.68 Yes 42 0.92 Yes 0 0 No -26 0.6 No 40 45.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215622592 - NM_000465 BARD1 0 . . . 9.68 86.34 11 5.2 No 34 0.94 Yes 0 0 No -22 0.58 No 39 64.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75491311 - NM_001040108 MLH3 0 . . . 4.71 78.47 37 5.63 Yes 19 0.99 Yes 0 0 No -29 0.76 Yes 39 44.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94158465 - NM_005591 MRE11 0 . . . 1.56 70.76 35 6.4 Yes 32 -3.59 No 0 0 No -34 0.82 Yes 46 80.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68595084 + NM_133509 RAD51B 0 . . . 5.39 82.56 19 4.9 No 56 -2.79 No 0 0 No -19 0.19 No 46 78.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68771048 + NM_004360 CDH1 0 . . . 1.34 68.27 24 6.51 Yes 61 -5.39 No 0 0 No -23 0.65 No 52 39.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68840721 + NM_004360 CDH1 0 . . . 5.26 78.6 68 8.72 Yes 54 -2.35 No 0 0 No -24 0.73 Yes 50 21.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59779325 - NM_032043 BRIP1 0 . . . 5.76 69.68 20 4.33 No 1 1.76 Yes 0 0 No -19 0.58 No 42 84.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89675568 + NM_000314 PTEN 0 . . . 10.02 91.74 41 6.04 Yes 43 0.7 No 0 0 No -40 0.7 Yes 38 63.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23639432 - NM_024675 PALB2 0 . . . 0.92 63.9 16 4.17 No 44 1.24 Yes 0 0 No -38 0.27 No 42 32.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68708675 + NM_133509 RAD51B 0 . . . 3.38 76.26 41 5.91 Yes 64 0.84 Yes 0 0 No -40 0.61 No 50 46.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68678361 + NM_133509 RAD51B 0 . . . 2.38 67.91 28 5.38 No 67 -5.89 No 0 0 No -27 0.65 No 53 47.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108116063 + NM_000051 ATM 0 . . . 0.1 67.26 16 3.87 No 52 0.57 No 0 0 No -32 0.67 Yes 47 40.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32903542 + NM_000059 BRCA2 0 . . . 4.38 84.16 9 3.87 No 14 0.78 Yes 26 0.45 Yes -28 0.86 Yes 44 83.27 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 190716109 + NM_000534 PMS1 0 . . . 5.55 80.42 24 5.29 No -1 0.96 Yes 0 0 No -24 0.65 No 44 82.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68784110 + NM_133509 RAD51B 0 . . . 4.03 77.52 16 4.81 No 65 0.25 No 0 0 No -20 0.61 No 48 83.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69115649 + NM_133509 RAD51B 0 . . . 1.56 70.42 19 4.58 No 69 -3.38 No 0 0 No -19 0.53 No 48 81.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29104786 - NM_001005735 CHEK2 0 . . . 5.2 85.02 54 6.26 Yes 5 1.23 Yes 0 0 No -36 0.4 No 53 79.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108173383 + NM_000051 ATM 0 . . . 2.38 74.89 32 6.37 Yes 7 0.92 Yes 0 0 No -21 0.92 Yes 45 48.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21979348 - NM_000077 CDKN2A 0 . . . 5.65 73 114 8.65 Yes 29 0.94 Yes 0 0 No -38 0.44 No 29 87.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47666064 + NM_000251 MSH2 0 . . . 1.62 63.37 14 4.13 No 35 1.56 Yes 0 0 No -43 0.43 No 35 36.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47802754 + NM_000251 MSH2 0 . . . 3 76.23 9 5.01 No 66 1.28 Yes 0 0 No -19 0.32 No 44 56.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68984455 + NM_133509 RAD51B 0 . . . 0.39 62.7 22 4.12 No 30 0.81 Yes 0 0 No -22 0.55 No 28 53.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89730500 + NM_000314 PTEN 0 . . . 3.36 69.06 14 4.32 No 52 0.4 No 0 0 No -25 0.42 No 39 52.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68359241 + NM_133509 RAD51B 0 . . . 3.2 81.38 17 4.81 No 0 0.31 No 0 0 No -59 0.53 No 44 54.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131908873 + NM_005732 RAD50 0 . . . 4.25 72.19 42 6.46 Yes 67 0.15 No 0 0 No -41 0.93 Yes 46 89.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68323338 + NM_133509 RAD51B 0 . . . 1.04 80.03 18 6.71 Yes 33 0.33 No 0 0 No -26 0.46 No 18 33.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37074149 + NM_000249 MLH1 0 . . . 2.55 67.43 35 6.07 Yes 34 1.31 Yes 0 0 No -34 0.73 Yes 35 75.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215615452 - NM_000465 BARD1 0 . . . 2.64 78.57 25 5.2 No 4 1.04 Yes 0 0 No -24 0.79 Yes 48 33.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215635630 - NM_000465 BARD1 0 . . . 2.89 70.47 25 5.8 Yes 67 -4.91 No 0 0 No -24 0.63 No 47 51.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69084308 + NM_133509 RAD51B 0 . . . 3.79 82.36 26 5.06 No 73 -0.67 No 0 0 No -33 0.45 No 23 74.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108153805 + NM_000051 ATM 0 . . . 1.6 0 12 4.24 No 36 -4.39 No 0 0 No -26 0.52 No 51 56.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90959691 - NM_002485 NBN 0 . . . 4 73.6 26 6.4 Yes 6 0.62 No 0 0 No -25 0.47 No 52 85.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47724888 + NM_000251 MSH2 0 . . . 1.94 75.18 14 4.47 No 33 1.14 Yes 0 0 No -20 0.57 No 25 51.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90992240 - NM_002485 NBN 0 . . . 0.02 56.64 17 4.09 No 55 0.31 No 0 0 No -32 0.52 No 44 82.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68832413 + NM_133509 RAD51B 0 . . . 3.9 74.27 13 4.16 No 68 0.46 No 0 0 No -23 0.75 Yes 46 46.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94200748 - NM_005591 MRE11 0 . . . 6.49 74.46 28 5.38 No 34 1.69 Yes 0 0 No -27 0.81 Yes 37 72.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7569677 - NM_000546 TP53 0 . . . 4.87 70.85 32 5.69 Yes 70 0.68 No 0 0 No -31 0.59 No 41 59.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68962384 + NM_133509 RAD51B 0 . . . 9.17 74.38 31 6.8 Yes 20 0.83 Yes 0 0 No -33 0.39 No 38 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131907661 + NM_005732 RAD50 0 . . . 1.47 0 45 6.78 Yes 52 0.66 No 0 0 No -26 0.3 No 56 42.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68575268 + NM_133509 RAD51B 0 . . . 3.56 67.59 13 5.57 Yes 12 0.5 No 0 0 No -28 0.4 No 46 50.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1226427 + NM_000455 STK11 0 . . . 0.42 0 48 5.79 Yes 53 0.43 No 27 0.85 Yes -16 0.53 No 29 55.94 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68447571 + NM_133509 RAD51B 0 . . . 0.35 68.38 12 3.78 No 68 -1.45 No 0 0 No -22 0.51 No 41 65.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68839462 + NM_133509 RAD51B 0 . . . 6.54 83.33 22 6 Yes -3 0.96 Yes 0 0 No -19 0.61 No 44 97.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68799301 + NM_004360 CDH1 0 . . . 3.13 80.34 59 8.4 Yes 33 1.16 Yes 0 0 No -25 0.84 Yes 25 66.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68616200 + NM_133509 RAD51B 0 . . . 6.6 83.39 24 5.2 No 7 1.19 Yes 0 0 No -21 0.77 Yes 42 75.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131924995 + NM_005732 RAD50 0 . . . 0.23 0 24 5.48 No 32 0.27 No 0 0 No -23 0.68 Yes 38 63.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68800932 + NM_004360 CDH1 0 . . . 2.12 68.79 50 7 Yes 76 1.63 Yes 0 0 No -34 0.76 Yes 50 76.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69068065 + NM_133509 RAD51B 0 . . . 7.6 83.49 32 4.83 No 7 1.72 Yes 0 0 No -26 0.65 No 51 83.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68779955 + NM_004360 CDH1 0 . . . 4.73 82.44 29 5.8 Yes 4 0.62 No 0 0 No -28 0.67 Yes 54 64.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29114240 - NM_001005735 CHEK2 0 . . . 2.71 78.08 19 4.62 No 75 1.22 Yes 0 0 No -19 0.84 Yes 37 73.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69128950 + NM_133509 RAD51B 0 . . . 3.23 79.45 45 7.87 Yes 38 0.68 No 0 0 No -44 0.77 Yes 55 46.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68433862 + NM_133509 RAD51B 0 . . . 2.64 62.75 24 5.29 No 1 0.12 No 0 0 No -21 0.74 Yes 57 18.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59883548 - NM_032043 BRIP1 0 . . . 3.53 78.09 12 5.1 No 69 -4.49 No 0 0 No -54 0.42 No 43 49.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68849449 + NM_133509 RAD51B 0 . . . 1.41 65.99 31 6.39 Yes -2 0.56 No 0 0 No -30 0.48 No 42 82.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89660762 + NM_000314 PTEN 0 . . . 5.96 73.88 27 7.61 Yes 69 0.47 No 0 0 No -26 0.94 Yes 47 47.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41208687 - NM_007294 BRCA1 0 . . . 7.05 83.21 27 6.84 Yes 48 1.16 Yes 0 0 No -26 0.42 No 10 73.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68878405 + NM_133509 RAD51B 0 . . . 4.91 72.1 15 6.06 Yes 22 0.2 No 0 0 No -26 0.36 No 44 69.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94216908 - NM_005591 MRE11 0 . . . 2.87 84.71 32 4.07 No 33 0.95 Yes 0 0 No -31 0.57 No 50 57.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89659026 + NM_000314 PTEN 0 . . . 1 79.42 16 4.69 No -2 1.17 Yes 0 0 No -34 0.46 No 50 61.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68883635 + NM_133509 RAD51B 0 . . . 3.51 74.63 25 6.98 Yes 71 -2.97 No 0 0 No -24 0.43 No 44 52.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69142473 + NM_133509 RAD51B 0 . . . 6.26 82.75 39 6.43 Yes 65 -4.42 No 0 0 No -38 0.94 Yes 52 56.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68695463 + NM_133509 RAD51B 0 . . . 6.18 76.67 23 5 No 1 0.76 No 0 0 No -27 0.39 No 47 70.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68779963 + NM_133509 RAD51B 0 . . . 11.02 89.84 39 7.1 Yes 6 0.74 No 0 0 No -38 0.84 Yes 52 67.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75485366 - NM_001040108 MLH3 0 . . . 9.01 90.25 39 6.4 Yes 6 1.91 Yes 0 0 No -38 0.32 No 40 60.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41249888 - NM_007294 BRCA1 0 . . . 4.07 70.1 40 6.4 Yes 28 1.29 Yes 0 0 No -39 0.72 Yes 36 82.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68679207 + NM_133509 RAD51B 0 . . . 1.61 67.69 17 5.71 Yes 59 -3.29 No 0 0 No -17 0.2 No 38 45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131891068 + NM_005732 RAD50 0 . . . 1.14 81.87 30 5.48 No 53 0.33 No 0 0 No -30 0.41 No 49 80.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41273422 - NM_007294 BRCA1 0 . . . 0.71 75.52 29 5.48 No 57 1.59 Yes 0 0 No -28 0.92 Yes 48 40.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131976249 + NM_005732 RAD50 0 . . . 4.31 81.82 15 4.43 No 73 0.06 No 0 0 No -18 0.63 No 48 52.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69044655 + NM_133509 RAD51B 0 . . . 8.63 86.21 28 5.29 No 0 0.9 Yes 0 0 No -25 0.86 Yes 58 50.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108138860 + NM_000051 ATM 0 . . . 5.72 94.37 17 4.8 No 40 0.91 Yes 0 0 No -56 0.65 No 48 83.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68524463 + NM_133509 RAD51B 0 . . . 3.46 77.37 27 5.48 No 23 1.79 Yes 0 0 No -26 0.49 No 35 70.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68906784 + NM_133509 RAD51B 0 . . . 6.1 76.14 19 4.94 No 25 -3.36 No 0 0 No -23 0.28 No 48 85.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56804720 + NM_058216 RAD51C 0 . . . 4.41 79.71 38 6.2 Yes 57 1.32 Yes 0 0 No -33 0.51 No 55 58.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68381452 + NM_133509 RAD51B 0 . . . 6.26 83.88 19 4.94 No 68 1.42 Yes 0 0 No -18 0.49 No 36 60.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190678590 + NM_000534 PMS1 0 . . . 2.53 83 58 7.87 Yes 73 1.62 Yes 0 0 No -46 0.65 No 42 94.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32918919 + NM_000059 BRCA2 0 . . . 2.3 72.51 50 5.31 No 56 1.52 Yes 0 0 No -54 0.45 No 50 18.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68649102 + NM_133509 RAD51B 0 . . . 3.01 77.62 15 5.39 No 43 0.93 Yes 0 0 No -28 0.2 No 50 33.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94160558 - NM_005591 MRE11 0 . . . 0.13 85.1 31 5.65 Yes 67 0.01 No 0 0 No -30 0.5 No 46 93.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68808594 + NM_004360 CDH1 0 . . . 0.54 67.97 28 5.38 No 64 -5.18 No 0 0 No -27 0.85 Yes 45 52.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1220911 + NM_000455 STK11 0 . . . 0.57 0 32 4.7 No 28 0.01 No 0 0 No -32 0.6 No 34 57.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68491501 + NM_133509 RAD51B 0 . . . 1.19 70.96 33 6.7 Yes 72 0.98 Yes 0 0 No -32 0.75 Yes 48 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37091763 + NM_000249 MLH1 0 . . . 0.45 0 40 8.11 Yes 17 0.3 No 0 0 No -34 0.44 No 35 49.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190699800 + NM_000534 PMS1 0 . . . 1.32 58.79 22 5.29 No 69 0.53 No 0 0 No -21 0.82 Yes 23 18.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6013377 - NM_000535 PMS2 0 . . . 0.47 74.56 15 4 No 55 -4.35 No 0 0 No -36 0.57 No 54 33.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47756935 + NM_000251 MSH2 0 . . . 6.43 71.99 26 5.62 Yes 57 -3.84 No 0 0 No -20 0.59 No 38 66.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6019738 - NM_000535 PMS2 0 . . . 6.25 80.95 30 5.14 No 75 0.35 No 0 0 No -29 0.9 Yes 48 51.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68807220 + NM_004360 CDH1 0 . . . 2.15 83.92 20 4.97 No 23 1.11 Yes 0 0 No -19 0.48 No 35 90.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68384374 + NM_133509 RAD51B 0 . . . 1.09 76.55 27 5.44 No 9 0.46 No 0 0 No -26 0.52 No 45 87.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56771415 + NM_058216 RAD51C 0 . . . 1.64 68.34 15 5.23 No 52 1.61 Yes 0 0 No -31 0.37 No 36 73.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215669692 - NM_000465 BARD1 0 . . . 1.51 78.8 21 4.95 No 33 1.17 Yes 0 0 No -20 0.94 Yes 15 36.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215627324 - NM_000465 BARD1 0 . . . 1.71 70.69 13 6.32 Yes 42 -2.44 No 0 0 No -33 0.53 No 49 78.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94200085 - NM_005591 MRE11 0 . . . 1.45 62.2 23 4.35 No 64 1.06 Yes 0 0 No -22 0.83 Yes 18 63.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37043714 + NM_000249 MLH1 0 . . . 2.61 67.34 34 7.5 Yes 23 1.54 Yes 0 0 No -25 0.58 No 35 65.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29138397 - NM_001005735 CHEK2 0 . . . 4.1 0 24 3.86 No 47 1.83 Yes 0 0 No -21 0.69 Yes 43 83.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47744934 + NM_000251 MSH2 0 . . . 9.29 84.77 24 6.21 Yes 2 0.38 No 0 0 No -23 0.61 No 42 49.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89629113 + NM_000314 PTEN 0 . . . 3.55 69.99 52 7.19 Yes 45 1.1 Yes 0 0 No -24 0.8 Yes 38 61.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190691122 + NM_000534 PMS1 0 . . . 3.54 78.4 12 5.2 No 15 -2.02 No 0 0 No -46 0.3 No 44 50.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69015376 + NM_133509 RAD51B 0 . . . 3.29 73.88 18 4.7 No 60 0.63 No 0 0 No -26 0.42 No 45 77.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68942354 + NM_133509 RAD51B 0 . . . 0.44 64.77 24 5.45 No 39 0.08 No 0 0 No -24 0.55 No 15 46.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47703710 + NM_000251 MSH2 0 . . . 8.86 90.74 24 5.1 No 16 0.25 No 0 0 No -23 0.62 No 42 44.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41270440 - NM_007294 BRCA1 0 . . . 1.95 76.63 16 5.83 Yes 58 -3.89 No 0 0 No -27 0.32 No 50 44.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108184582 + NM_000051 ATM 0 . . . 5.92 85.37 17 5.18 No 5 0.57 No 0 0 No -28 0.47 No 44 59.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68362347 + NM_133509 RAD51B 0 . . . 9.33 88.78 28 4.22 No 52 -2.42 No 0 0 No -27 0.44 No 53 57.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59769228 - NM_032043 BRIP1 0 . . . 6.74 83.32 46 6.63 Yes 60 1.16 Yes 0 0 No -23 0.75 Yes 43 42.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29094531 - NM_001005735 CHEK2 0 . . . 6.28 75.54 15 5.74 Yes -2 0.05 No 0 0 No -14 0.33 No 35 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23639104 - NM_024675 PALB2 0 . . . 6.33 83.69 20 4.18 No 10 0.97 Yes 0 0 No -22 0.85 Yes 48 50.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215627840 - NM_000465 BARD1 0 . . . 10.52 87.05 18 4.69 No 18 0.26 No 0 0 No -54 0.29 No 40 75.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68439009 + NM_133509 RAD51B 0 . . . 0.91 68.4 15 3 No 12 -2.47 No 0 0 No -37 0.75 Yes 47 56.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59787240 - NM_032043 BRIP1 0 . . . 5.4 80.61 9 4.69 No 69 0.82 Yes 0 0 No -54 0.56 No 39 83.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89677723 + NM_000314 PTEN 0 . . . 0.23 0 35 5.22 No 74 1.16 Yes 0 0 No -34 0.83 Yes 30 67.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47788163 + NM_000251 MSH2 0 . . . 4.07 82.94 28 5.1 No 51 -2.78 No 0 0 No -27 0.36 No 47 76.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215674877 - NM_000465 BARD1 0 . . . 2.88 70.2 25 5.56 Yes 17 0.9 Yes 0 0 No -24 0.66 No 48 40.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131969575 + NM_005732 RAD50 0 . . . 1.39 82.97 39 6.21 Yes 19 0.83 Yes 0 0 No -23 0.79 Yes 39 69.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90949022 - NM_002485 NBN 0 . . . 1.69 69.75 23 4.81 No 65 0.21 No 0 0 No -22 0.97 Yes 47 83.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94192535 - NM_005591 MRE11 0 . . . 1.74 69.55 32 5.24 No 16 0.02 No 0 0 No -27 0.42 No 42 74.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47650260 + NM_000251 MSH2 0 . . . 3.27 83.78 16 6.71 Yes 36 -0.91 No 0 0 No -26 0.42 No 44 69.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68918932 + NM_133509 RAD51B 0 . . . 6.83 78.64 36 6.48 Yes 50 0.2 No 0 0 No -35 0.71 Yes 31 83.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68313583 + NM_133509 RAD51B 0 . . . 7.95 81.4 35 6.4 Yes 70 -3.64 No 0 0 No -34 0.83 Yes 44 47.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41234910 - NM_007294 BRCA1 0 . . . 3.16 64.1 25 5.39 No 69 -5 No 0 0 No -24 0.79 Yes 39 77.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48006730 + NM_000179 MSH6 0 . . . 4.57 70.03 17 4.74 No 9 0.52 No 0 0 No -22 0.45 No 49 84.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152365861 - NM_005431 XRCC2 0 . . . 0.13 66.29 33 5.5 No 51 0.76 No 0 0 No -32 0.74 Yes 45 83.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108099286 + NM_000051 ATM 0 . . . 3.32 0 33 5.74 Yes 72 0.13 No 0 0 No -32 0.3 No 53 50.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131957877 + NM_005732 RAD50 0 . . . 6.94 88.63 16 4.58 No 24 0.78 Yes 0 0 No -15 0.58 No 34 95.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47734809 + NM_000251 MSH2 0 . . . 0.74 79.15 21 4.8 No 33 1.03 Yes 0 0 No -20 0.87 Yes 25 83.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68855539 + NM_004360 CDH1 0 . . . 4.26 74.23 18 6.24 Yes 75 0.98 Yes 0 0 No -17 0.57 No 41 88.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68477629 + NM_133509 RAD51B 0 . . . 6.8 77.26 29 5.26 No 33 0.28 No 0 0 No -32 0.32 No 44 86.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23632616 - NM_024675 PALB2 0 . . . 7.69 93.25 14 7.2 Yes 52 0.92 Yes 0 0 No -22 0.49 No 47 55.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68510260 + NM_133509 RAD51B 0 . . . 3.51 80.8 27 5.2 No 30 -2.17 No 0 0 No -26 0.64 No 51 63.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56810457 + NM_058216 RAD51C 0 . . . 4.36 81.57 19 5.68 Yes 48 -4.07 No 0 0 No -19 0.57 No 44 79.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41245415 - NM_007294 BRCA1 0 . . . 3.74 75.34 17 5.55 No 15 0.39 No 0 0 No -26 0.58 No 43 92.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108173096 + NM_000051 ATM 0 . . . 8.76 85.67 13 4.36 No 65 1.29 Yes 0 0 No -38 0.43 No 47 56.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41015812 + NM_001164269 RAD51 0 . . . 2.17 74.53 10 5.39 No 12 0.39 No 0 0 No -19 0.55 No 43 53.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68651735 + NM_133509 RAD51B 0 . . . 2.88 68.54 20 6.98 Yes 57 -5.44 No 0 0 No -39 0.71 Yes 47 86.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68963606 + NM_133509 RAD51B 0 . . . 5.94 79.7 29 5.92 Yes 13 0.75 No 0 0 No -28 0.81 Yes 45 94.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68863139 + NM_004360 CDH1 0 . . . 3.82 82.62 17 3.99 No 1 0.98 Yes 0 0 No -20 0.61 No 46 63.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108170790 + NM_000051 ATM 0 . . . 4.1 76.17 15 5.2 No 54 0.67 No 0 0 No -25 0.76 Yes 37 51.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75512718 - NM_001040108 MLH3 0 . . . 5.59 93.23 14 5.29 No 5 0.83 Yes 0 0 No -27 0.4 No 48 68.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68803582 + NM_004360 CDH1 0 . . . 0.95 74.02 32 7.05 Yes 37 0.07 No 0 0 No -32 0.89 Yes 14 61.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68415701 + NM_133509 RAD51B 0 . . . 3.14 69.78 25 5.39 No 61 0.4 No 0 0 No -22 0.8 Yes 61 44.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47663258 + NM_000251 MSH2 0 . . . 3.09 0 24 5.57 Yes 45 1.43 Yes 0 0 No -23 0.81 Yes 13 29.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68308960 + NM_133509 RAD51B 0 . . . 6.74 77.15 45 8.3 Yes 11 1.1 Yes 0 0 No -44 0.56 No 47 86.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68476551 + NM_133509 RAD51B 0 . . . 1.82 63.55 23 5.58 Yes 32 0.96 Yes 0 0 No -22 0.39 No 26 84.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89633285 + NM_000314 PTEN 0 . . . 2.67 79.14 43 6.34 Yes 48 1.08 Yes 0 0 No -21 0.48 No 50 72.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41256604 - NM_007294 BRCA1 0 . . . 9.74 79.93 22 5.36 No 10 0.52 No 0 0 No -21 0.28 No 39 72.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89667990 + NM_000314 PTEN 0 . . . 5.44 80.02 31 6.08 Yes 28 1.31 Yes 0 0 No -30 0.82 Yes 30 96.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68590742 + NM_133509 RAD51B 0 . . . 3.32 81.63 21 5.2 No 58 1.08 Yes 0 0 No -20 0.89 Yes 41 72.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152345325 - NM_005431 XRCC2 0 . . . 5.24 80.12 22 6.24 Yes 7 1.16 Yes 0 0 No -21 0.72 Yes 51 86.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68356949 + NM_133509 RAD51B 0 . . . 0.45 82.15 21 4.9 No 6 0.16 No 0 0 No -20 0.68 Yes 52 33.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37046321 + NM_000249 MLH1 0 . . . 0.64 67.09 54 5.95 Yes 66 1.66 Yes 0 0 No -53 0.64 No 60 25.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68824080 + NM_133509 RAD51B 0 . . . 3.65 74.88 14 6.07 Yes 24 1.59 Yes 0 0 No -23 0.44 No 34 83.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69040389 + NM_133509 RAD51B 0 . . . 3.34 77.15 15 3.93 No 7 0.03 No 0 0 No -15 0.57 No 51 89.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47799950 + NM_000251 MSH2 0 . . . 10.01 80.28 15 4.3 No 30 0.33 No 0 0 No -43 0.82 Yes 40 74.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59863219 - NM_032043 BRIP1 0 . . . 4.32 69.25 20 5 No 35 -2.69 No 0 0 No -19 0.49 No 54 49.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69146630 + NM_133509 RAD51B 0 . . . 4.54 73.3 23 4.78 No 66 1.33 Yes 0 0 No -22 0.35 No 46 72.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89718444 + NM_000314 PTEN 0 . . . 6.64 79.36 34 8.78 Yes 55 1.45 Yes 0 0 No -33 0.81 Yes 49 75.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32963670 + NM_000059 BRCA2 0 . . . 2.37 81.11 17 4.48 No 24 0.95 Yes 0 0 No -27 0.71 Yes 39 79.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94164792 - NM_005591 MRE11 0 . . . 0.37 59.66 24 5.48 No 63 0.97 Yes 0 0 No -28 0.36 No 50 93.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68613171 + NM_133509 RAD51B 0 . . . 2.65 54.78 44 5.96 Yes 30 1 Yes 0 0 No -30 0.52 No 28 91.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56805969 + NM_058216 RAD51C 0 . . . 4.13 79.24 25 6.04 Yes 33 0.9 Yes 0 0 No -24 0.7 Yes 25 78.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52444817 - NM_004656 BAP1 0 . . . 6.49 72.03 23 6.07 Yes 58 -1.24 No 0 0 No -22 0.76 Yes 39 25.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105180388 + NM_021930 RINT1 0 . . . 2.05 0 23 5.2 No 38 0.5 No 0 0 No -22 0.87 Yes 38 50.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47755315 + NM_000251 MSH2 0 . . . 2.05 75.81 22 4.9 No 3 1.23 Yes 0 0 No -21 0.82 Yes 46 64.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131954254 + NM_005732 RAD50 0 . . . 1.7 80.12 21 6.16 Yes 6 1.45 Yes 0 0 No -20 0.9 Yes 52 67.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105197129 + NM_021930 RINT1 0 . . . 11.67 87.87 17 4.79 No 9 2.33 Yes 0 0 No -22 0.49 No 49 67.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68619947 + NM_133509 RAD51B 0 . . . 0.91 58.55 21 4.9 No 53 -4.57 No 0 0 No -20 0.92 Yes 37 94.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37062644 + NM_000249 MLH1 0 . . . 1.24 63.91 33 5.71 Yes 75 -2.11 No 0 0 No -32 0.51 No 58 40.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190738418 + NM_000534 PMS1 0 . . . 5.34 88.13 17 4.8 No 36 0.02 No 0 0 No -26 0.56 No 40 50.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131908930 + NM_005732 RAD50 0 . . . 2.45 71.19 33 6.16 Yes 14 0.41 No 0 0 No -32 0.77 Yes 44 71.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68770858 + NM_133509 RAD51B 0 . . . 0.68 76.63 25 4.75 No 58 -3.88 No 0 0 No -18 0.77 Yes 43 31.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137011 + NM_133509 RAD51B 0 . . . 0.91 67.29 27 4.44 No 57 -3.76 No 0 0 No -26 0.85 Yes 43 68.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68829164 + NM_004360 CDH1 0 . . . 4.04 77.93 24 5.29 No 69 -5.21 No 0 0 No -29 0.59 No 51 34.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41202968 - NM_007294 BRCA1 0 . . . 1.32 66.41 24 6.93 Yes -1 0.09 No 0 0 No -23 0.87 Yes 50 85.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94216027 - NM_005591 MRE11 0 . . . 5.99 86.2 30 5.75 Yes 9 1.12 Yes 0 0 No -29 0.59 No 49 94.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108195189 + NM_000051 ATM 0 . . . 2.11 70.53 44 7.07 Yes 25 0.88 Yes 0 0 No -30 0.62 No 43 83.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69046803 + NM_133509 RAD51B 0 . . . 5.49 88.86 23 5.1 No 7 0.08 No 0 0 No -22 0.77 Yes 48 66.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68736660 + NM_133509 RAD51B 0 . . . 4.2 70.73 29 5.31 No 1 0.22 No 0 0 No -28 0.41 No 53 54.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37049004 + NM_000249 MLH1 0 . . . 2.02 64.29 20 3.45 No 24 -2.69 No 0 0 No -19 0.56 No 45 87.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94154030 - NM_005591 MRE11 0 . . . 3.5 79.33 16 4 No 75 0.98 Yes 0 0 No -27 0.49 No 39 52.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68302544 + NM_133509 RAD51B 0 . . . 2.15 77.77 21 4.69 No 71 -4.88 No 0 0 No -20 0.92 Yes 53 55.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6039998 - NM_000535 PMS2 0 . . . 1.52 0 25 5.41 No 30 0.47 No 0 0 No -24 0.74 Yes 28 62.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75506439 - NM_001040108 MLH3 0 . . . 2.39 85.13 9 3.66 No 8 0.24 No 0 0 No -19 0.41 No 50 94.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68858201 + NM_004360 CDH1 0 . . . 0.24 69.09 26 5.1 No 51 0.8 Yes 0 0 No -25 0.4 No 51 32.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89628041 + NM_000314 PTEN 0 . . . 4.45 77.62 41 6.4 Yes 53 0.56 No 0 0 No -22 0.89 Yes 38 64.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90953636 - NM_002485 NBN 0 . . . 3.65 80.98 29 5.39 No 22 0.4 No 0 0 No -24 0.55 No 41 62.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47738491 + NM_000251 MSH2 0 . . . 6.93 84.82 20 6.4 Yes 18 0.53 No 0 0 No -24 0.42 No 40 96.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89681415 + NM_000314 PTEN 0 . . . 1.93 85.04 25 5.29 No 3 0.24 No 0 0 No -27 0.66 No 48 86.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37037249 + NM_000249 MLH1 0 . . . 4.59 84.47 28 5.74 Yes 32 0.96 Yes 0 0 No -27 0.58 No 52 48.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6029291 - NM_000535 PMS2 0 . . . 2.21 0 52 7.97 Yes 57 0.63 No 0 0 No -33 0.76 Yes 33 82.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89638815 + NM_000314 PTEN 0 . . . 5.09 72.89 17 6.56 Yes 46 0.67 No 0 0 No -16 0.82 Yes 44 48.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75498929 - NM_001040108 MLH3 0 . . . 5.45 74.18 42 6.13 Yes 51 0.67 No 0 0 No -42 0.57 No 39 92.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69055641 + NM_133509 RAD51B 0 . . . 0.63 70.16 12 5.34 No 23 0.42 No 0 0 No -25 0.56 No 35 64.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68475048 + NM_133509 RAD51B 0 . . . 1.56 64.7 24 4.28 No -4 0.39 No 0 0 No -23 0.86 Yes 45 69.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68408303 + NM_133509 RAD51B 0 . . . 5.12 81.58 34 7.18 Yes 71 1.03 Yes 0 0 No -33 0.91 Yes 30 57.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215628206 - NM_000465 BARD1 0 . . . 5.52 77.62 17 4.35 No 45 0.93 Yes 0 0 No -17 0.76 Yes 39 57.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152349149 - NM_005431 XRCC2 0 . . . 1.82 69.09 21 4.15 No 31 1.35 Yes 0 0 No -20 0.76 Yes 44 86.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108092123 + NM_000051 ATM 0 . . . 0.51 67.13 19 5.74 Yes 68 -5.97 No 0 0 No -26 0.67 Yes 41 40.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45797651 - NM_001048171 MUTYH 0 . . . 5.09 80.66 18 5.61 Yes 47 0.49 No 0 0 No -26 0.33 No 41 67.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75518180 - NM_001040108 MLH3 0 . . . 5.58 66.36 30 5.38 No 75 -3.69 No 0 0 No -29 0.85 Yes 28 47.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89644215 + NM_000314 PTEN 0 . . . 1.56 49.03 17 4.58 No 60 0.76 No 0 0 No -17 0.43 No 41 77.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152346170 - NM_005431 XRCC2 0 . . . 6.07 76.05 26 6.78 Yes 11 1.06 Yes 0 0 No -25 0.79 Yes 47 94.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68946920 + NM_133509 RAD51B 0 . . . 2.1 0 43 6.66 Yes 20 0.07 No 0 0 No -42 0.6 No 38 30.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59823714 - NM_032043 BRIP1 0 . . . 0.94 65.79 35 6.16 Yes -4 0.79 Yes 0 0 No -31 0.69 Yes 26 19.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68435213 + NM_133509 RAD51B 0 . . . 4.32 75.76 26 6.38 Yes 68 1.06 Yes 0 0 No -25 0.64 No 45 92.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108161238 + NM_000051 ATM 0 . . . 3.35 67.29 27 5.39 No 24 -3.78 No 0 0 No -26 0.63 No 42 36.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108113435 + NM_000051 ATM 0 . . . 0.99 63.32 34 6.65 Yes 29 0.45 No 0 0 No -36 0.38 No 44 64.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47763250 + NM_000251 MSH2 0 . . . 5.45 72.65 12 4.64 No 61 0.33 No 0 0 No -21 0.59 No 51 76.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68772970 + NM_004360 CDH1 0 . . . 5.2 82.54 25 6.67 Yes 4 0.85 Yes 0 0 No -24 0.78 Yes 49 87.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21966499 - NM_000077 CDKN2A 0 . . . 3.3 72.26 19 5.57 Yes 73 0.03 No 0 0 No -18 0.67 Yes 50 53.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68452751 + NM_133509 RAD51B 0 . . . 7.41 68.49 77 8.68 Yes 14 0.55 No 0 0 No -47 0.78 Yes 44 74.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68680804 + NM_133509 RAD51B 0 . . . 1.66 67.99 33 7.12 Yes 43 0.46 No 0 0 No -32 0.89 Yes 27 52.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190702288 + NM_000534 PMS1 0 . . . 1.52 61.05 17 4.47 No 33 0.17 No 0 0 No -16 0.56 No 38 28.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75503095 - NM_001040108 MLH3 0 . . . 0.09 76.63 17 3.57 No 57 0.2 No 0 0 No -22 0.43 No 50 37.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68370055 + NM_133509 RAD51B 0 . . . 6.42 83.61 15 5.75 Yes 57 0.53 No 0 0 No -23 0.94 Yes 23 39.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47650115 + NM_000251 MSH2 0 . . . 2.52 66.51 19 5.73 Yes 16 0.52 No 0 0 No -23 0.73 Yes 41 33.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56808104 + NM_058216 RAD51C 0 . . . 9.59 90.28 17 5.09 No 14 0.68 No 0 0 No -21 0.46 No 44 76.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68563372 + NM_133509 RAD51B 0 . . . 4.65 78.33 20 4.74 No 65 0.5 No 0 0 No -19 0.76 Yes 50 97.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69038817 + NM_133509 RAD51B 0 . . . 5.29 75.1 37 5.6 Yes 45 -2.4 No 0 0 No -27 0.27 No 53 51.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47744252 + NM_000251 MSH2 0 . . . 7.25 84.89 77 5.69 Yes 25 -2 No 0 0 No -36 0.42 No 48 60.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69042478 + NM_133509 RAD51B 0 . . . 0.9 53.38 54 7.87 Yes 33 0.09 No 0 0 No -28 0.68 Yes 49 77.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68469541 + NM_133509 RAD51B 0 . . . 2.26 0 28 5.24 No 36 0.14 No 0 0 No -43 0.67 Yes 22 70.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45802103 - NM_001048171 MUTYH 0 . . . 0.61 0 16 5.04 No 9 0.6 No 0 0 No -20 0.57 No 38 61.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33425226 - NM_002878 RAD51D 0 . . . 1.71 0 39 6.3 Yes 5 0.16 No 0 0 No -25 0.5 No 41 49.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37039215 + NM_000249 MLH1 0 . . . 1.56 0 27 6.36 Yes 52 -2.57 No 0 0 No -31 0.62 No 51 85.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89697201 + NM_000314 PTEN 0 . . . 2.59 79.9 52 4.77 No 26 -3.12 No 0 0 No -39 0.68 Yes 41 92.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190657112 + NM_000534 PMS1 0 . . . 3.14 71.64 28 5.29 No 9 0.33 No 0 0 No -27 0.52 No 49 74.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68345559 + NM_133509 RAD51B 0 . . . 1.32 0 32 6.16 Yes 51 1.39 Yes 0 0 No -31 0.45 No 44 68.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68507975 + NM_133509 RAD51B 0 . . . 6.23 85.65 20 5.1 No 7 0.81 Yes 0 0 No -19 0.73 Yes 51 88.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215655617 - NM_000465 BARD1 0 . . . 1.17 75.79 18 4.9 No 46 0.97 Yes 0 0 No -17 0.42 No 12 55.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105202940 + NM_021930 RINT1 0 . . . 1.35 75.66 21 5.61 Yes 69 1.09 Yes 0 0 No -29 0.46 No 20 73.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68942639 + NM_133509 RAD51B 0 . . . 1.08 0 34 7.47 Yes 14 0.72 No 0 0 No -33 0.64 No 35 59.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6019947 - NM_000535 PMS2 0 . . . 3.57 0 22 5.29 No 76 -3.2 No 0 0 No -21 0.79 Yes 34 40.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6030655 - NM_000535 PMS2 0 . . . 6.2 78.37 40 6.2 Yes 15 0.53 No 0 0 No -39 0.38 No 43 46.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69101019 + NM_133509 RAD51B 0 . . . 2.3 63.6 16 4.66 No 38 0.03 No 0 0 No -29 0.83 Yes 25 63.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59804085 - NM_032043 BRIP1 0 . . . 1.66 68.62 24 6.32 Yes 9 0.98 Yes 0 0 No -33 0.56 No 49 91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84403034 - NM_139076 FAM175A 0 . . . 1.91 76.6 21 5.3 No 52 0.61 No 0 0 No -27 0.86 Yes 46 74.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47796757 + NM_000251 MSH2 0 . . . 0.82 64.91 25 4.9 No 73 -5.52 No 0 0 No -24 0.87 Yes 42 83.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56776486 + NM_058216 RAD51C 0 . . . 0.78 84.22 19 7.07 Yes 33 0.95 Yes 0 0 No -18 0.47 No 50 43.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190706895 + NM_000534 PMS1 0 . . . 2.39 72.09 25 5.36 No 9 0.85 Yes 0 0 No -22 0.76 Yes 49 97.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108213025 + NM_000051 ATM 0 . . . 5.42 77.72 30 5.31 No 57 0.49 No 0 0 No -29 0.49 No 49 58.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108110708 + NM_000051 ATM 0 . . . 1.63 86.72 23 4.69 No 76 1.14 Yes 0 0 No -22 0.74 Yes 39 62.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190675116 + NM_000534 PMS1 0 . . . 2.26 75.87 19 5.47 No 61 -4.7 No 0 0 No -48 0.87 Yes 46 85.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68326353 + NM_133509 RAD51B 0 . . . 3.23 65.32 27 5.39 No 15 0.93 Yes 0 0 No -24 0.64 No 43 90.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7570774 - NM_000546 TP53 0 . . . 2.22 75.94 24 5.48 No -4 1.36 Yes 0 0 No -23 0.47 No 52 53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68729783 + NM_133509 RAD51B 0 . . . 4.14 73.02 31 5.83 Yes 50 1.02 Yes 0 0 No -33 0.86 Yes 39 28.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68800042 + NM_004360 CDH1 0 . . . 3.69 66.31 22 3.15 No 48 0.68 No 0 0 No -21 0.55 No 42 58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48014801 + NM_000179 MSH6 0 . . . 6.25 88.55 26 7.55 Yes 47 -1.2 No 0 0 No -25 0.88 Yes 44 89.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90964316 - NM_002485 NBN 0 . . . 3.14 78.34 19 5.17 No 23 0.21 No 0 0 No -29 0.86 Yes 39 69.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108221451 + NM_000051 ATM 0 . . . 0.35 68.19 22 5.22 No 68 -3.03 No 0 0 No -21 0.52 No 60 31.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68744428 + NM_133509 RAD51B 0 . . . 4.93 84.39 14 5.38 No 35 0.65 No 0 0 No -26 0.79 Yes 49 73.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47730909 + NM_000251 MSH2 0 . . . 2.09 0 19 3.54 No 11 2.55 Yes 0 0 No -19 0.25 No 47 90.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69049408 + NM_133509 RAD51B 0 . . . 0.17 73.95 21 4.88 No 48 0.66 No 0 0 No -20 0.73 Yes 49 40.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68904710 + NM_133509 RAD51B 0 . . . 1.58 0 20 5.1 No 65 -3.76 No 0 0 No -24 0.49 No 45 70.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69042119 + NM_133509 RAD51B 0 . . . 8.04 86.12 21 5.78 Yes 56 1 Yes 0 0 No -20 0.83 Yes 22 44.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131965728 + NM_005732 RAD50 0 . . . 0.57 0 41 5.57 Yes 21 0.81 Yes 0 0 No -28 0.67 Yes 21 60.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131922027 + NM_005732 RAD50 0 . . . 6.14 73.24 29 5.95 Yes 68 1.72 Yes 0 0 No -24 0.82 Yes 47 83.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68863196 + NM_133509 RAD51B 0 . . . 1.67 71.43 11 4.12 No 7 0.8 Yes 0 0 No -23 0.59 No 51 93.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68362664 + NM_133509 RAD51B 0 . . . 1.56 0 30 5.56 Yes 64 1.14 Yes 0 0 No -29 0.52 No 41 89.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59937132 - NM_032043 BRIP1 0 . . . 4.63 89.41 43 5.39 No 51 0.84 Yes 0 0 No -20 0.27 No 48 62.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47675651 + NM_000251 MSH2 0 . . . 2.78 75.27 29 5.72 Yes 31 0.04 No 0 0 No -28 0.89 Yes 37 59.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7589364 - NM_000546 TP53 0 . . . 8.02 70.28 28 5.35 No 14 0.4 No 0 0 No -28 0.76 Yes 44 90.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41267065 - NM_007294 BRCA1 0 . . . 7.76 78.48 15 4.36 No 50 0.84 Yes 0 0 No -59 0.47 No 35 77.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59870923 - NM_032043 BRIP1 0 . . . 2.22 58.87 29 7.68 Yes 50 0.55 No 0 0 No -28 0.91 Yes 42 50.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84392939 - NM_139076 FAM175A 0 . . . 1.61 68.95 14 5.29 No 51 -3.29 No 0 0 No -21 0.61 No 47 82.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69087054 + NM_133509 RAD51B 0 . . . 4.89 83.03 38 6.73 Yes 38 -2.32 No 0 0 No -37 0.53 No 48 63.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59779151 - NM_032043 BRIP1 0 . . . 3.63 75.04 14 4.64 No 18 0.91 Yes 0 0 No -26 0.4 No 40 98.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68798007 + NM_004360 CDH1 0 . . . 1.28 64.15 26 6.08 Yes 22 0.6 No 0 0 No -35 0.42 No 36 87.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68566248 + NM_133509 RAD51B 0 . . . 4.74 77.78 18 5.23 No 23 0.91 Yes 0 0 No -47 0.68 Yes 48 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84399486 - NM_139076 FAM175A 0 . . . 3.72 66.86 27 3.57 No 72 -6.31 No 0 0 No -29 0.64 No 45 42.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215671714 - NM_000465 BARD1 0 . . . 7.92 84.29 19 2.29 No 32 -3.13 No 0 0 No -43 0.75 Yes 43 46.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56807418 + NM_058216 RAD51C 0 . . . 0.15 0 16 4.4 No 26 0.92 Yes 0 0 No -22 0.74 Yes 38 43.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68950594 + NM_133509 RAD51B 0 . . . 3.8 0 21 4.9 No 22 0.84 Yes 0 0 No -20 0.92 Yes 36 96.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84390363 - NM_139076 FAM175A 0 . . . 4.28 87.25 22 4.87 No 76 0.51 No 0 0 No -21 0.64 No 60 33.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32917721 + NM_000059 BRCA2 0 . . . 7.47 78.58 15 5 No 8 0.29 No 0 0 No -22 0.71 Yes 49 82.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29091399 - NM_001005735 CHEK2 0 . . . 3.15 68.34 21 4.47 No 13 0.87 Yes 0 0 No -25 0.83 Yes 40 88.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94164945 - NM_005591 MRE11 0 . . . 4.51 86.22 20 5.24 No 17 0.84 Yes 0 0 No -19 0.76 Yes 41 95.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59763475 - NM_032043 BRIP1 0 . . . 0.83 66.28 23 5.19 No 74 1.05 Yes 0 0 No -22 0.78 Yes 48 77.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90989035 - NM_002485 NBN 0 . . . 0.16 61.73 18 5.48 No 72 0.26 No 0 0 No -25 0.84 Yes 39 61.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1223317 + NM_000455 STK11 0 . . . 2.34 0 15 5.1 No NA NA NA 0 0 No -40 0.63 No 50 23.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56795147 + NM_058216 RAD51C 0 . . . 3.45 67.51 14 5.06 No 51 0.2 No 0 0 No -17 0.79 Yes 51 46.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47717195 + NM_000251 MSH2 0 . . . 0.47 59.39 35 4.76 No 28 1.24 Yes 0 0 No -27 0.8 Yes 57 34.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32891988 + NM_000059 BRCA2 0 . . . 0.04 71.27 16 5.04 No -2 0.11 No 0 0 No -20 0.74 Yes 49 88.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90969924 - NM_002485 NBN 0 . . . 4.25 66.03 24 3.62 No 22 0.59 No 0 0 No -23 0.76 Yes 36 37.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131935265 + NM_005732 RAD50 0 . . . 1.59 69.91 46 5.06 No 73 0.27 No 0 0 No -31 0.64 No 48 32.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68863431 + NM_133509 RAD51B 0 . . . 2.23 76.89 23 7.35 Yes 33 -3.68 No 0 0 No -22 0.91 Yes 48 62.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90984511 - NM_002485 NBN 0 . . . 1.27 56.48 14 5.2 No 58 -5.88 No 0 0 No -24 0.52 No 41 54.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94206252 - NM_005591 MRE11 0 . . . 7.37 81.92 31 4.97 No 31 1.15 Yes 0 0 No -23 0.59 No 43 70.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190728706 + NM_000534 PMS1 0 . . . 2.84 69.75 23 6.24 Yes 44 0.42 No 0 0 No -22 0.88 Yes 50 33.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190685673 + NM_000534 PMS1 0 . . . 2.02 0 14 4.36 No 75 -2.6 No 0 0 No -34 0.46 No 40 69.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32915456 + NM_000059 BRCA2 0 . . . 2.88 79.4 25 5.2 No 76 0.39 No 0 0 No -24 0.8 Yes 44 40.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47798383 + NM_000251 MSH2 0 . . . 0.84 0 28 5.56 Yes 42 -3.15 No 0 0 No -31 0.79 Yes 43 33.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108167242 + NM_000051 ATM 0 . . . 2.96 68.34 20 5.09 No 23 1.58 Yes 0 0 No -51 0.31 No 40 69.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131914709 + NM_005732 RAD50 0 . . . 1.08 0 36 6.75 Yes 54 1.15 Yes 0 0 No -35 0.67 Yes 31 69.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69040870 + NM_133509 RAD51B 0 . . . 4.64 84.17 29 4.59 No 69 0.26 No 0 0 No -28 0.73 Yes 44 62.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69109665 + NM_133509 RAD51B 0 . . . 4.35 75.68 18 4.53 No 1 -2.03 No 0 0 No -43 0.66 No 46 61.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69137342 + NM_133509 RAD51B 0 . . . 9.36 79.35 27 5.02 No 18 2.38 Yes 0 0 No -26 0.64 No 40 65.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59794527 - NM_032043 BRIP1 0 . . . 0.38 67.75 10 4 No 42 1.53 Yes 0 0 No -30 0.52 No 50 49.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32949177 + NM_000059 BRCA2 0 . . . 1.49 78.82 26 5.56 Yes 75 -3.89 No 0 0 No -24 0.79 Yes 49 26.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47671248 + NM_000251 MSH2 0 . . . 1.45 69.76 22 5.1 No 43 1.39 Yes 0 0 No -19 0.69 Yes 15 30.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105188709 + NM_021930 RINT1 0 . . . 2.15 66.37 18 4.69 No 57 1.63 Yes 0 0 No -22 0.5 No 45 62.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89654430 + NM_000314 PTEN 0 . . . 0.3 0 49 6.62 Yes 11 1.52 Yes 0 0 No -26 0.61 No 47 78.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68422332 + NM_133509 RAD51B 0 . . . 3.5 83.96 13 4.8 No 44 -2.46 No 0 0 No -38 0.52 No 46 57.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32902816 + NM_000059 BRCA2 0 . . . 0.04 63.69 18 5.29 No 59 -5.81 No 0 0 No -21 0.78 Yes 50 52.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108151085 + NM_000051 ATM 0 . . . 3.16 77.69 15 5.74 Yes 41 1.08 Yes 0 0 No -30 0.56 No 43 56.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41025927 + NM_001164269 RAD51 0 . . . 6.11 76.81 25 4.84 No 40 1.15 Yes 0 0 No -22 0.88 Yes 48 77.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47655806 + NM_000251 MSH2 0 . . . 1.09 76.52 20 7.17 Yes 14 0.83 Yes 0 0 No -19 0.56 No 44 88.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69052536 + NM_133509 RAD51B 0 . . . 7.08 82.23 17 6.48 Yes 8 1.83 Yes 0 0 No -16 0.78 Yes 50 91.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84394990 - NM_139076 FAM175A 0 . . . 0.95 66.46 16 4.69 No 72 1.53 Yes 0 0 No -18 0.62 No 39 67.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68683075 + NM_133509 RAD51B 0 . . . 2.62 64.98 16 4.53 No 61 0.83 Yes 0 0 No -22 0.49 No 47 38.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215667743 - NM_000465 BARD1 0 . . . 1.26 60.63 144 12.07 Yes 40 -3.8 No 0 0 No -22 0.38 No 47 32.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131972408 + NM_005732 RAD50 0 . . . 4.97 83.21 15 5.34 No 33 2.11 Yes 0 0 No -24 0.62 No 25 71.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89649988 + NM_000314 PTEN 0 . . . 2.71 72.7 24 5.47 No -2 0.53 No 0 0 No -51 0.5 No 60 55.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68893003 + NM_133509 RAD51B 0 . . . 2.32 83.37 28 4.2 No 40 1.38 Yes 0 0 No -27 0.47 No 18 95.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68694648 + NM_133509 RAD51B 0 . . . 0.57 71.52 30 5.55 No -1 0.54 No 0 0 No -29 0.85 Yes 35 65.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69113418 + NM_133509 RAD51B 0 . . . 8.91 82.19 21 5.65 Yes 29 1.24 Yes 0 0 No -20 0.74 Yes 44 93.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68315876 + NM_133509 RAD51B 0 . . . 5.07 0 16 7 Yes 15 0.12 No 0 0 No -26 0.66 No 52 69.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68312356 + NM_133509 RAD51B 0 . . . 1.78 76.63 20 4.79 No 67 -4.95 No 0 0 No -19 0.54 No 47 50.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59814696 - NM_032043 BRIP1 0 . . . 3.31 73.79 15 5.29 No 71 1.5 Yes 0 0 No -21 0.55 No 46 72.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48020085 + NM_000179 MSH6 0 . . . 2.48 89.88 56 7.68 Yes 3 1.05 Yes 0 0 No -35 0.58 No 51 78.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131966482 + NM_005732 RAD50 0 . . . 0.63 69.06 31 5.31 No 0 0.3 No 0 0 No -56 0.59 No 54 35.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69110554 + NM_133509 RAD51B 0 . . . 5.12 85.29 10 5.62 Yes 31 0.91 Yes 0 0 No -25 0.34 No 48 68.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59837854 - NM_032043 BRIP1 0 . . . 1.49 58.86 13 5.03 No 21 0.84 Yes 0 0 No -48 0.37 No 42 56.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90967511 - NM_002485 NBN 0 . . . 0.53 63.4 28 5.81 Yes 7 0.21 No 0 0 No -25 0.59 No 56 40.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108233256 + NM_000051 ATM 0 . . . 2.42 70.7 30 5.36 No 74 -3.12 No 0 0 No -16 0.43 No 48 68.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29122273 - NM_001005735 CHEK2 0 . . . 0.66 77.8 28 5.82 Yes 23 -1.14 No 0 0 No -27 0.8 Yes 50 75.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108172500 + NM_000051 ATM 0 . . . 1.17 0 27 5.74 Yes 69 -4.79 No 0 0 No -26 0.93 Yes 44 45.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68844810 + NM_133509 RAD51B 0 . . . 3.01 75.71 30 5.53 No 27 0.69 No 0 0 No -29 0.94 Yes 46 54.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68837015 + NM_133509 RAD51B 0 . . . 3.8 78.94 26 5.1 No 4 0.16 No 0 0 No -25 0.95 Yes 47 54.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68790951 + NM_004360 CDH1 0 . . . 1.87 82.71 23 3.58 No 54 0.43 No 0 0 No -22 0.64 No 45 46.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68857945 + NM_004360 CDH1 0 . . . 0.71 79.68 34 7.27 Yes 15 -0.38 No 0 0 No -33 0.62 No 15 93.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94158367 - NM_005591 MRE11 0 . . . 8.41 88.86 39 6.28 Yes 72 0.41 No 0 0 No -26 0.58 No 51 46.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674837 + NM_000251 MSH2 0 . . . 1.61 81.44 36 5.7 Yes 58 1 Yes 0 0 No -25 0.67 Yes 42 59.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94219924 - NM_005591 MRE11 0 . . . 5.85 83.82 17 5.29 No 74 1 Yes 0 0 No -16 0.4 No 39 53.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89654511 + NM_000314 PTEN 0 . . . 1.59 76.14 46 7.14 Yes 7 0.13 No 0 0 No -22 0.6 No 43 60.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32891086 + NM_000059 BRCA2 0 . . . 0.09 74.68 23 4.63 No 4 0.41 No 0 0 No -22 0.79 Yes 54 75.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94174296 - NM_005591 MRE11 0 . . . 1.49 76.72 21 4.75 No 63 -1.36 No 0 0 No -29 0.37 No 23 41.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48005750 + NM_000179 MSH6 0 . . . 2.12 63.28 18 5.26 No 3 -1.17 No 0 0 No -24 0.4 No 45 68.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68625051 + NM_133509 RAD51B 0 . . . 3.29 79 14 5.1 No 58 0.2 No 0 0 No -20 0.27 No 47 69.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69063129 + NM_133509 RAD51B 0 . . . 0.37 0 14 4.42 No 18 0.87 Yes 0 0 No -19 0.66 No 44 50.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68605509 + NM_133509 RAD51B 0 . . . 1.35 75.26 22 6.86 Yes 73 0.49 No 0 0 No -21 0.96 Yes 48 69.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32964811 + NM_000059 BRCA2 0 . . . 1.06 0 22 7.14 Yes 47 0.56 No 0 0 No -21 0.73 Yes 31 51.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59832819 - NM_032043 BRIP1 0 . . . 0.24 80.65 26 5 No 76 1.46 Yes 0 0 No -25 0.75 Yes 50 67.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131926399 + NM_005732 RAD50 0 . . . 0.83 69.26 27 4.86 No 39 0.48 No 0 0 No -26 0.26 No 48 71.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68407590 + NM_133509 RAD51B 0 . . . 3.5 74.62 50 7.21 Yes 11 0.95 Yes 0 0 No -49 0.72 Yes 15 35.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68834747 + NM_133509 RAD51B 0 . . . 2.86 64.39 22 6.56 Yes 36 0.68 No 0 0 No -21 0.8 Yes 33 71.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68549244 + NM_133509 RAD51B 0 . . . 0.62 65.23 43 5.55 No 21 -2.58 No 0 0 No -22 0.46 No 37 90.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68758441 + NM_133509 RAD51B 0 . . . 0.31 73.69 12 4.05 No 43 0.6 No 0 0 No -26 0.38 No 56 52.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37090799 + NM_000249 MLH1 0 . . . 3.88 68.11 29 7.06 Yes 70 -4.25 No 0 0 No -28 0.95 Yes 45 64.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6014393 - NM_000535 PMS2 0 . . . 3.29 79.06 19 6.02 Yes 26 0.46 No 0 0 No -24 0.74 Yes 45 36.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59874490 - NM_032043 BRIP1 0 . . . 4.84 73.64 26 5.99 Yes 3 1.33 Yes 0 0 No -25 0.64 No 48 68.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59763357 - NM_032043 BRIP1 0 . . . 0.51 73.65 16 4.69 No 17 0.54 No 0 0 No -52 0.63 No 58 42.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666795 - NM_000465 BARD1 0 . . . 2.68 57.8 16 5.48 No 76 -5.23 No 0 0 No -24 0.52 No 40 60.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90972656 - NM_002485 NBN 0 . . . 1.63 71.28 18 4.9 No 23 1.38 Yes 0 0 No -38 0.74 Yes 35 82.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59863122 - NM_032043 BRIP1 0 . . . 1.49 0 20 5.1 No 47 1.23 Yes 0 0 No -19 0.78 Yes 20 55.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68365099 + NM_133509 RAD51B 0 . . . 1.2 52.84 24 5.48 No 23 0.37 No 0 0 No -23 0.65 No 49 61.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47800559 + NM_000251 MSH2 0 . . . 3.49 75.88 55 5.84 Yes 29 0.37 No 0 0 No -24 0.4 No 44 91.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59902306 - NM_032043 BRIP1 0 . . . 5.57 88.96 35 4.92 No 73 -1.54 No 0 0 No -29 0.66 Yes 53 69.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89675234 + NM_000314 PTEN 0 . . . 1.12 0 23 5.06 No 10 0.83 Yes 0 0 No -22 0.4 No 48 88.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68435338 + NM_133509 RAD51B 0 . . . 3.13 84.75 16 4.69 No 1 0.61 No 0 0 No -51 0.92 Yes 48 81.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68839708 + NM_004360 CDH1 0 . . . 0.85 74.73 17 4.58 No 33 0.89 Yes 0 0 No -33 0.26 No 25 38.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68837847 + NM_004360 CDH1 0 . . . 6.29 78.49 35 5.7 Yes 65 -1.58 No 0 0 No -27 0.65 No 34 45.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23635622 - NM_024675 PALB2 0 . . . 3.18 72.07 49 5.75 Yes 22 0.14 No 0 0 No -25 0.67 Yes 44 55.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68723255 + NM_133509 RAD51B 0 . . . 2 0 31 5.53 No 34 0.62 No 0 0 No -30 0.77 Yes 43 61.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59938681 - NM_032043 BRIP1 0 . . . 1.79 69.04 27 5.2 No 41 0.78 Yes 0 0 No -26 0.45 No 38 43.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68513308 + NM_133509 RAD51B 0 . . . 0.4 54.06 19 4.8 No 19 0.61 No 0 0 No -18 0.72 Yes 39 56.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59851685 - NM_032043 BRIP1 0 . . . 8.29 75.51 24 5.29 No 50 1 Yes 0 0 No -23 0.84 Yes 38 71.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94185511 - NM_005591 MRE11 0 . . . 9.52 84.04 24 5.1 No 75 1.2 Yes 0 0 No -23 0.43 No 49 43.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108108981 + NM_000051 ATM 0 . . . 7.57 80.42 23 6.08 Yes 2 0.44 No 0 0 No -22 0.95 Yes 39 72.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68647419 + NM_133509 RAD51B 0 . . . 5.45 73.39 48 5.34 No 6 0.58 No 0 0 No -26 0.72 Yes 49 44.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48009040 + NM_000179 MSH6 0 . . . 4.34 79.21 27 5.48 No 68 0.61 No 0 0 No -26 0.59 No 52 24.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68879393 + NM_133509 RAD51B 0 . . . 8.37 97.25 12 5.67 Yes 57 -2.95 No 0 0 No -26 0.45 No 50 68.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108140830 + NM_000051 ATM 0 . . . 5.29 87.55 22 5.99 Yes 71 0.17 No 0 0 No -21 0.91 Yes 46 37.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89706388 + NM_000314 PTEN 0 . . . 7.38 90.98 17 5.24 No 72 0.16 No 0 0 No -24 0.4 No 41 72.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75516804 - NM_001040108 MLH3 0 . . . 1.79 63.01 15 4.58 No 31 0.29 No 0 0 No -57 0.29 No 39 42.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68472953 + NM_133509 RAD51B 0 . . . 5.04 75.9 20 6.9 Yes 36 0.61 No 0 0 No -19 0.64 No 34 74.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59877890 - NM_032043 BRIP1 0 . . . 2.32 77.53 31 4.52 No 37 0.71 No 0 0 No -28 0.46 No 44 81.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215630351 - NM_000465 BARD1 0 . . . 3.36 78.47 24 6.13 Yes 11 1.43 Yes 0 0 No -24 0.76 Yes 47 90.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47699495 + NM_000251 MSH2 0 . . . 1.35 0 27 5.74 Yes 27 1.01 Yes 0 0 No -31 0.55 No 36 66.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59825257 - NM_032043 BRIP1 0 . . . 0.18 62.07 24 7.01 Yes 26 0.15 No 0 0 No -23 0.79 Yes 45 63.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69044674 + NM_133509 RAD51B 0 . . . 3.37 75.27 32 6.12 Yes 19 0.91 Yes 0 0 No -19 0.4 No 47 79.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32897476 + NM_000059 BRCA2 0 . . . 4.02 80.12 25 6 Yes 9 1.2 Yes 0 0 No -24 0.87 Yes 49 83.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59815487 - NM_032043 BRIP1 0 . . . 2.82 72.89 40 6.35 Yes 4 0.95 Yes 0 0 No -39 0.52 No 54 82.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68612472 + NM_133509 RAD51B 0 . . . 6.79 75.26 13 4.51 No 56 0.85 Yes 0 0 No -55 0.66 Yes 30 87.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32942694 + NM_000059 BRCA2 0 . . . 0.58 78.42 28 5.28 No 62 1.95 Yes 0 0 No -27 0.51 No 47 80.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59765950 - NM_032043 BRIP1 0 . . . 0.85 82.46 21 4.81 No 24 1.62 Yes 0 0 No -24 0.75 Yes 21 97.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68512302 + NM_133509 RAD51B 0 . . . 2.54 66.53 25 4.9 No 69 0.83 Yes 0 0 No -24 0.88 Yes 52 37.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41232242 - NM_007294 BRCA1 0 . . . 1.29 62.95 15 5.39 No 47 0.58 No 0 0 No -46 0.26 No 40 69.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69066666 + NM_133509 RAD51B 0 . . . 4.83 78.39 37 4.68 No 52 -0.97 No 0 0 No -21 0.62 No 41 86.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68640672 + NM_133509 RAD51B 0 . . . 4.53 87.9 19 5.84 Yes 11 0.53 No 0 0 No -24 0.93 Yes 47 84.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56806953 + NM_058216 RAD51C 0 . . . 2.91 83.57 28 5.2 No 38 1.16 Yes 0 0 No -27 0.62 No 31 75.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56802009 + NM_058216 RAD51C 0 . . . 3.09 78.06 15 5.57 Yes 20 1.14 Yes 0 0 No -19 0.15 No 49 81.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68727553 + NM_133509 RAD51B 0 . . . 0.74 79.74 28 6.93 Yes 6 0.96 Yes 0 0 No -27 0.91 Yes 46 76.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47755507 + NM_000251 MSH2 0 . . . 7.69 81.06 23 5.28 No 47 -1.03 No 0 0 No -22 0.6 No 44 42.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848057 - NM_032043 BRIP1 0 . . . 3.43 67.35 42 6.4 Yes 73 1.24 Yes 0 0 No -21 0.84 Yes 43 55.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37034291 + NM_000249 MLH1 0 . . . 3.96 0 22 4.9 No 40 -2.35 No 0 0 No -21 0.87 Yes 50 79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32971796 + NM_000059 BRCA2 0 . . . 1.63 75.9 33 5.11 No 66 0.86 Yes 0 0 No -29 0.6 No 39 92.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90985962 - NM_002485 NBN 0 . . . 1.37 69.3 29 5.92 Yes 40 1.81 Yes 0 0 No -28 0.67 Yes 18 67.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68551217 + NM_133509 RAD51B 0 . . . 2.29 70.63 27 6.36 Yes 46 1.8 Yes 0 0 No -26 0.91 Yes 38 55.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59826421 - NM_032043 BRIP1 0 . . . 6.5 86.2 16 5.04 No 9 1.12 Yes 0 0 No -40 0.5 No 49 93.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69029888 + NM_133509 RAD51B 0 . . . 4.55 89.13 37 4.74 No 57 0.17 No 0 0 No -20 0.61 No 46 55.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32907095 + NM_000059 BRCA2 0 . . . 3.28 76.13 15 5.39 No 39 0.25 No 0 0 No -24 0.31 No 46 70.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108150312 + NM_000051 ATM 0 . . . 1.1 65.06 30 5.76 Yes 43 0.78 Yes 0 0 No -29 0.93 Yes 44 51.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94165238 - NM_005591 MRE11 0 . . . 0.66 74.77 16 4.86 No 44 1.25 Yes 0 0 No -20 0.77 Yes 44 82.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29123845 - NM_001005735 CHEK2 0 . . . 1.73 0 13 4.28 No 7 0.33 No 0 0 No -20 0.86 Yes 36 46.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68963578 + NM_133509 RAD51B 0 . . . 6.36 76.91 33 5.68 Yes 73 0.93 Yes 0 0 No -33 0.32 No 45 61.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68419729 + NM_133509 RAD51B 0 . . . 1 0 41 6.28 Yes 76 0.76 No 0 0 No -33 0.61 No 47 90.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108194999 + NM_000051 ATM 0 . . . 3.6 71.11 17 4.58 No 67 0.93 Yes 0 0 No -16 0.93 Yes 40 67.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131979107 + NM_005732 RAD50 0 . . . 5.6 79.85 30 8.6 Yes 56 0.97 Yes 0 0 No -29 0.84 Yes 44 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69075371 + NM_133509 RAD51B 0 . . . 7.15 78.14 24 6.15 Yes -2 0.88 Yes 0 0 No -23 0.86 Yes 47 90.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32964079 + NM_000059 BRCA2 0 . . . 2.76 0 16 4.57 No 73 0.69 No 0 0 No -39 0.61 No 46 71.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131903432 + NM_005732 RAD50 0 . . . 1.09 77.19 22 6.08 Yes -3 0.74 No 0 0 No -21 0.76 Yes 45 58.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48013985 + NM_000179 MSH6 0 . . . 3.79 88.38 21 6.37 Yes 2 1.28 Yes 0 0 No -29 0.51 No 45 75.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48025220 + NM_000179 MSH6 0 . . . 5.7 81.68 24 5.19 No 69 0.87 Yes 0 0 No -23 0.71 Yes 37 66.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105204848 + NM_021930 RINT1 0 . . . 4.72 77.1 50 6.94 Yes 74 1.45 Yes 0 0 No -42 0.63 No 38 48.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68541163 + NM_133509 RAD51B 0 . . . 2.19 74.87 21 4.62 No 57 0.65 No 0 0 No -20 0.84 Yes 23 74.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108134018 + NM_000051 ATM 0 . . . 5.76 75.42 15 6.16 Yes 4 0.37 No 0 0 No -23 0.76 Yes 53 59.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59848846 - NM_032043 BRIP1 0 . . . 7.6 87.52 16 5.56 Yes 46 -1.7 No 0 0 No -16 0.46 No 45 60.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68371774 + NM_133509 RAD51B 0 . . . 3.67 76.84 22 5.12 No 58 0.73 No 0 0 No -21 0.46 No 48 77.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68886460 + NM_133509 RAD51B 0 . . . 2.01 70.46 15 4.76 No 65 0.7 No 0 0 No -26 0.5 No 38 82.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108162982 + NM_000051 ATM 0 . . . 3.39 62.81 11 5 No 39 0.45 No 0 0 No -42 0.46 No 32 52.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108150845 + NM_000051 ATM 0 . . . 1.34 0 24 3.85 No 56 0.91 Yes 0 0 No -27 0.32 No 30 65.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32951176 + NM_000059 BRCA2 0 . . . 3.73 78.09 13 4.36 No 19 -3.28 No 0 0 No -21 0.41 No 47 79.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108141607 + NM_000051 ATM 0 . . . 3.8 80.12 45 7.05 Yes 7 1.16 Yes 0 0 No -38 0.95 Yes 51 84.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68757328 + NM_133509 RAD51B 0 . . . 5.37 75.69 13 5.57 Yes 9 0.85 Yes 0 0 No -44 0.66 No 49 81.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37069334 + NM_000249 MLH1 0 . . . 1.4 76.74 33 6.24 Yes 29 0.72 No 0 0 No -32 0.56 No 54 81.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68686390 + NM_133509 RAD51B 0 . . . 1.53 70.62 29 5.6 Yes 11 0.02 No 0 0 No -23 0.48 No 47 63.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68775045 + NM_004360 CDH1 0 . . . 1.03 0 16 3.8 No 65 -5.2 No 0 0 No -22 0.62 No 55 76.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47640845 + NM_000251 MSH2 0 . . . 0.05 79.85 28 5.83 Yes 45 0.28 No 0 0 No -27 0.92 Yes 52 56.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47741425 + NM_000251 MSH2 0 . . . 5.59 75.07 22 5.64 Yes 47 0.71 No 0 0 No -21 0.94 Yes 38 62.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68718070 + NM_133509 RAD51B 0 . . . 3.74 76.36 22 7.81 Yes 5 0.43 No 0 0 No -21 0.85 Yes 49 79.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32898188 + NM_000059 BRCA2 0 . . . 4.89 85.45 18 5.56 Yes 22 1.11 Yes 0 0 No -18 0.44 No 46 62.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56779113 + NM_058216 RAD51C 0 . . . 3.8 82.77 28 6.05 Yes 4 1.39 Yes 0 0 No -27 0.87 Yes 45 65.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68292100 + NM_133509 RAD51B 0 . . . 2.22 69.78 31 5.66 Yes 32 0.19 No 0 0 No -26 0.54 No 40 56.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68688890 + NM_133509 RAD51B 0 . . . 1.79 75.46 25 6.16 Yes 13 0.31 No 0 0 No -24 0.72 Yes 45 81.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68883342 + NM_133509 RAD51B 0 . . . 1.09 65.28 31 5.83 Yes 9 1.02 Yes 0 0 No -31 0.51 No 41 54.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59867597 - NM_032043 BRIP1 0 . . . 4.18 67.33 45 6.85 Yes 76 0.65 No 0 0 No -21 0.81 Yes 51 38.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042108 - NM_000535 PMS2 0 . . . 2.02 70.13 15 4.01 No 16 -2.49 No 0 0 No -31 0.41 No 35 58.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32943042 + NM_000059 BRCA2 0 . . . 5.99 86.2 28 6.03 Yes 9 1.12 Yes 0 0 No -27 0.9 Yes 49 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68508933 + NM_133509 RAD51B 0 . . . 2.41 0 21 4.8 No 13 0.48 No 0 0 No -20 0.48 No 52 63.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90988183 - NM_002485 NBN 0 . . . 0.53 58.23 24 4.29 No 34 1.54 Yes 0 0 No -23 0.54 No 44 51.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190742217 + NM_000534 PMS1 0 . . . 4.35 70.01 19 4.93 No 67 1.13 Yes 0 0 No -18 0.53 No 40 82.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69121120 + NM_133509 RAD51B 0 . . . 11.29 86.37 17 5.57 Yes 10 1.51 Yes 0 0 No -16 0.52 No 48 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41215662 - NM_007294 BRCA1 0 . . . 2.19 73.92 36 6.48 Yes 0 1.16 Yes 0 0 No -35 0.91 Yes 48 80.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47734107 + NM_000251 MSH2 0 . . . 5.39 73.57 22 5.64 Yes 1 0.37 No 0 0 No -21 0.79 Yes 50 33.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68839162 + NM_004360 CDH1 0 . . . 0.83 70.78 23 5 No -1 1.18 Yes 0 0 No -22 0.61 No 59 45.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68607704 + NM_133509 RAD51B 0 . . . 5.02 62.98 32 5.4 No 14 0.69 No 0 0 No -27 0.94 Yes 44 85.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69123803 + NM_133509 RAD51B 0 . . . 2.1 71.54 17 5.57 Yes 47 -2.99 No 0 0 No -16 0.78 Yes 58 29.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131974081 + NM_005732 RAD50 0 . . . 3.96 71.44 15 4.58 No 15 0.9 Yes 0 0 No -35 0.83 Yes 43 89.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68780529 + NM_004360 CDH1 0 . . . 5.03 83.41 45 7.76 Yes 23 -1.59 No 0 0 No -44 0.55 No 43 50.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69052778 + NM_133509 RAD51B 0 . . . 5.29 0 26 7.06 Yes 35 0.27 No 0 0 No -25 0.88 Yes 53 63.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68569143 + NM_133509 RAD51B 0 . . . 5.79 0 40 6.56 Yes 54 0.42 No 0 0 No -26 0.65 No 42 57.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89663481 + NM_000314 PTEN 0 . . . 0.12 75.89 61 6.97 Yes 45 0.37 No 0 0 No -25 0.82 Yes 13 24.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6018877 - NM_000535 PMS2 0 . . . 0.99 76.36 28 5.83 Yes 3 0.34 No 0 0 No -27 0.79 Yes 48 60.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68440440 + NM_133509 RAD51B 0 . . . 3.96 82.34 26 4.97 No 68 -4.66 No 0 0 No -25 0.79 Yes 44 72.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59898606 - NM_032043 BRIP1 0 . . . 4.28 81 26 5.64 Yes 0 1.37 Yes 0 0 No -28 0.6 No 50 76.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21983045 - NM_000077 CDKN2A 0 . . . 3.38 71.39 15 4.26 No 76 -5.82 No 0 0 No -58 0.4 No 37 44.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68610030 + NM_133509 RAD51B 0 . . . 3.3 80.3 29 5.2 No 35 0.11 No 0 0 No -28 0.93 Yes 50 59.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131962260 + NM_005732 RAD50 0 . . . 2.57 73.18 20 5.69 Yes 10 0.51 No 0 0 No -29 0.67 Yes 35 80.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47685799 + NM_000251 MSH2 0 . . . 3.14 0 50 9.14 Yes 42 0.96 Yes 0 0 No -27 0.85 Yes 42 52.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89629580 + NM_000314 PTEN 0 . . . 1.26 77.63 15 5.43 No 56 0.41 No 0 0 No -23 0.7 Yes 51 72.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94152236 - NM_005591 MRE11 0 . . . 3.41 70.44 10 4 No 18 0.79 Yes 0 0 No -29 0.48 No 40 48.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23652617 - NM_024675 PALB2 0 . . . 0.77 64.68 25 6.08 Yes 30 -3.69 No 0 0 No -24 0.85 Yes 43 46.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29107808 - NM_001005735 CHEK2 0 . . . 4.99 86.1 14 3.93 No 56 1.27 Yes 0 0 No -25 0.5 No 42 64.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108193738 + NM_000051 ATM 0 . . . 2.51 67.96 18 4.73 No 37 0.74 No 0 0 No -56 0.38 No 37 78.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105204944 + NM_021930 RINT1 0 . . . 2.98 70.19 33 6.9 Yes 10 2.24 Yes 0 0 No -21 0.58 No 48 84.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59785254 - NM_032043 BRIP1 0 . . . 0.48 76.63 43 6.04 Yes 67 -4.96 No 0 0 No -36 0.47 No 55 54.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68543326 + NM_133509 RAD51B 0 . . . 4.75 74.43 33 5.65 Yes 43 -3.13 No 0 0 No -28 0.78 Yes 46 74.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68638118 + NM_133509 RAD51B 0 . . . 2.43 65.88 19 5 No 16 0.96 Yes 0 0 No -56 0.59 No 42 87.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131977718 + NM_005732 RAD50 0 . . . 3.22 71.97 48 6.37 Yes 54 -1 No 0 0 No -50 0.55 No 17 38.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68405288 + NM_133509 RAD51B 0 . . . 1.38 63.26 31 7.49 Yes 33 -2.44 No 0 0 No -34 0.63 No 39 56.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1220198 + NM_000455 STK11 0 . . . 0.57 77.9 41 9.23 Yes 51 -4.09 No 0 0 No -40 0.48 No 51 40.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94150085 - NM_005591 MRE11 0 . . . 2.74 76.13 24 5.2 No 43 0.45 No 0 0 No -23 0.86 Yes 49 58.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41236481 - NM_007294 BRCA1 0 . . . 3.9 75.78 22 5.29 No 19 0.51 No 0 0 No -22 0.49 No 45 76.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41241189 - NM_007294 BRCA1 0 . . . 2.17 68.06 60 8.47 Yes 47 0.47 No 0 0 No -40 0.62 No 48 56.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68913425 + NM_133509 RAD51B 0 . . . 1.27 59 26 6.16 Yes 25 -2.81 No 0 0 No -25 0.82 Yes 42 42.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47651552 + NM_000251 MSH2 0 . . . 3.6 85.02 21 5.19 No 4 1.2 Yes 0 0 No -20 0.34 No 54 64.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68385187 + NM_133509 RAD51B 0 . . . 3.88 75.54 22 5 No 58 1.16 Yes 0 0 No -21 0.52 No 48 59.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69151144 + NM_133509 RAD51B 0 . . . 7.33 85.84 29 6.1 Yes 56 0.5 No 0 0 No -28 0.68 Yes 51 39.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40995464 + NM_001164269 RAD51 0 . . . 0.12 64.2 19 5 No -3 0.18 No 0 0 No -43 0.36 No 42 61.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68779654 + NM_133509 RAD51B 0 . . . 5.65 82.8 22 5.29 No 19 0.83 Yes 0 0 No -21 0.67 Yes 43 52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68636741 + NM_133509 RAD51B 0 . . . 1.69 0 14 5.74 Yes 8 1.16 Yes 0 0 No -26 0.52 No 50 90.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68435525 + NM_133509 RAD51B 0 . . . 2.81 66.5 17 5.29 No -2 0.85 Yes 0 0 No -21 0.72 Yes 43 42.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37087080 + NM_000249 MLH1 0 . . . 4.27 77.27 16 5.43 No 58 0.55 No 0 0 No -25 0.9 Yes 45 93.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68503460 + NM_133509 RAD51B 0 . . . 8.19 75.67 46 6.86 Yes 17 0.34 No 0 0 No -30 0.52 No 46 86.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90989802 - NM_002485 NBN 0 . . . 2.03 72.54 28 5.39 No 23 0.93 Yes 0 0 No -27 0.85 Yes 35 70.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68870369 + NM_004360 CDH1 0 . . . 2.1 0 10 4.69 No 66 0.93 Yes 0 0 No -19 0.3 No 40 70.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68914428 + NM_133509 RAD51B 0 . . . 5.67 80.48 29 5.04 No 11 0.32 No 0 0 No -21 0.66 No 37 40.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68943885 + NM_133509 RAD51B 0 . . . 1.93 71.58 18 5.47 No 71 0.92 Yes 0 0 No -40 0.72 Yes 51 59.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108173270 + NM_000051 ATM 0 . . . 1.92 0 18 5.57 Yes 34 1.13 Yes 0 0 No -22 0.16 No 24 94.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68913967 + NM_133509 RAD51B 0 . . . 0.16 59.47 23 3.71 No 32 0.38 No 0 0 No -22 0.7 Yes 51 32.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215596320 - NM_000465 BARD1 0 . . . 8.11 88.94 11 6.8 Yes 50 -2.1 No 0 0 No -26 0.28 No 43 50.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45801293 - NM_001048171 MUTYH 0 . . . 1.59 74.06 20 4.41 No 3 0.74 No 0 0 No -22 0.63 No 50 83.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89657019 + NM_000314 PTEN 0 . . . 2.43 74.83 18 4.56 No 33 0.95 Yes 0 0 No -27 0.67 Yes 42 66.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89700252 + NM_000314 PTEN 0 . . . 2.55 57.83 16 5.03 No 30 -1.65 No 0 0 No -20 0.76 Yes 45 28.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32921846 + NM_000059 BRCA2 0 . . . 6.35 81.05 23 5.24 No 26 0.61 No 0 0 No -26 0.64 No 38 74.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68823385 + NM_004360 CDH1 0 . . . 2.1 75.79 18 4.78 No 54 -4.12 No 0 0 No -22 0.4 No 50 79.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47645753 + NM_000251 MSH2 0 . . . 5.17 77.8 21 5.11 No 6 1.12 Yes 0 0 No -21 0.6 No 48 81.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68937925 + NM_133509 RAD51B 0 . . . 0.14 67.16 21 4.57 No 27 -2.87 No 0 0 No -20 0.53 No 61 34.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144413 + NM_133509 RAD51B 0 . . . 3.72 84.38 25 5.2 No 24 0.17 No 0 0 No -24 0.72 Yes 42 72.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69078501 + NM_133509 RAD51B 0 . . . 1.71 0 17 5.74 Yes 69 0.99 Yes 0 0 No -28 0.37 No 56 34.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131909987 + NM_005732 RAD50 0 . . . 9.54 86.84 15 5.02 No 14 0.54 No 0 0 No -25 0.66 No 44 93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68774287 + NM_133509 RAD51B 0 . . . 0.13 75.88 14 4.46 No 70 -3.69 No 0 0 No -38 0.37 No 27 39.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29112946 - NM_001005735 CHEK2 0 . . . 5.37 83.69 20 5.56 Yes 6 0.84 Yes 0 0 No -24 0.65 No 44 73.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68751327 + NM_133509 RAD51B 0 . . . 2.95 74.12 28 5.34 No 71 2.12 Yes 0 0 No -27 0.65 No 50 92.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56804364 + NM_058216 RAD51C 0 . . . 5.2 85.02 24 4.8 No 72 1.17 Yes 0 0 No -23 0.58 No 53 80.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69118076 + NM_133509 RAD51B 0 . . . 4.2 78.96 17 4.51 No 65 1.4 Yes 0 0 No -17 0.39 No 48 90.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68292475 + NM_133509 RAD51B 0 . . . 4.02 83.57 21 4.91 No 56 0.84 Yes 0 0 No -27 0.74 Yes 41 87.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59791311 - NM_032043 BRIP1 0 . . . 1.64 67.57 32 5.55 No 60 1.48 Yes 0 0 No -23 0.25 No 11 46.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68616592 + NM_133509 RAD51B 0 . . . 3.59 0 25 5.37 No 19 0.66 No 0 0 No -27 0.69 Yes 39 92.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68928013 + NM_133509 RAD51B 0 . . . 2.2 75.23 31 5.29 No 76 -5.51 No 0 0 No -25 0.92 Yes 46 59.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69074731 + NM_133509 RAD51B 0 . . . 1.36 0 14 4.37 No 55 -3.16 No 0 0 No -23 0.88 Yes 47 52.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69057302 + NM_133509 RAD51B 0 . . . 3.36 74.7 21 5.32 No 49 0.3 No 0 0 No -20 0.58 No 48 58.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69030743 + NM_133509 RAD51B 0 . . . 5.3 77.26 26 4.88 No 75 0.47 No 0 0 No -26 0.33 No 44 79.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47646054 + NM_000251 MSH2 0 . . . 0.38 76.44 20 5.1 No 2 0.83 Yes 0 0 No -22 0.41 No 34 43.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131943797 + NM_005732 RAD50 0 . . . 3.59 63.37 26 4.89 No 24 0.59 No 0 0 No -58 0.5 No 34 87.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94168435 - NM_005591 MRE11 0 . . . 3.5 72.2 58 6.69 Yes 63 0.61 No 0 0 No -27 0.51 No 49 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1225585 + NM_000455 STK11 0 . . . 3.12 77.96 21 4.46 No 75 1.67 Yes 0 0 No -21 0.6 No 45 34.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59822417 - NM_032043 BRIP1 0 . . . 5.07 79.48 37 7.61 Yes 42 0.51 No 0 0 No -36 0.67 Yes 37 54.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47720786 + NM_000251 MSH2 0 . . . 3.29 79.27 17 4.66 No 38 1.75 Yes 0 0 No -23 0.77 Yes 40 68.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94157941 - NM_005591 MRE11 0 . . . 3.58 67.63 32 7.18 Yes 49 1.29 Yes 0 0 No -31 0.94 Yes 36 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152353416 - NM_005431 XRCC2 0 . . . 0.76 74.26 18 5.39 No 31 1.04 Yes 0 0 No -22 0.58 No 42 39.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68810922 + NM_004360 CDH1 0 . . . 2.26 71.9 30 4.28 No 21 1.25 Yes 0 0 No -29 0.83 Yes 42 68.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32916934 + NM_000059 BRCA2 0 . . . 0.32 74.68 20 6.48 Yes 12 0.59 No 0 0 No -33 0.68 Yes 46 88.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94202839 - NM_005591 MRE11 0 . . . 0.39 0 29 4.25 No 71 -3.63 No 0 0 No -28 0.35 No 39 62.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89630835 + NM_000314 PTEN 0 . . . 10.32 89.86 17 4.8 No 41 0.35 No 0 0 No -23 0.86 Yes 36 71.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1229784 + NM_000455 STK11 0 . . . 1.85 61.32 27 5.74 Yes NA NA NA 0 0 No -26 0.68 Yes 45 26.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68995803 + NM_133509 RAD51B 0 . . . 1.68 0 15 5.4 No 43 -3.87 No 0 0 No -48 0.37 No 52 79.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59874573 - NM_032043 BRIP1 0 . . . 2.13 0 26 5.46 No 65 0.78 Yes 0 0 No -23 0.71 Yes 51 66.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1208735 + NM_000455 STK11 0 . . . 1.01 83.85 39 5.3 No 33 1.12 Yes 0 0 No -38 0.75 Yes 50 69.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84397328 - NM_139076 FAM175A 0 . . . 4.07 84 14 4.44 No 2 1.51 Yes 0 0 No -25 0.43 No 18 69.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89654321 + NM_000314 PTEN 0 . . . 0.35 68.2 21 5.03 No 57 0.99 Yes 0 0 No -20 0.57 No 33 63.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68335247 + NM_133509 RAD51B 0 . . . 1.27 79.22 31 6.5 Yes 39 -2.68 No 0 0 No -30 0.97 Yes 44 85.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37091121 + NM_000249 MLH1 0 . . . 2.62 76.57 54 6.91 Yes 7 1.2 Yes 0 0 No -31 0.35 No 51 90.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59889464 - NM_032043 BRIP1 0 . . . 4.4 76.68 21 4.99 No 18 0.92 Yes 0 0 No -24 0.6 No 51 81.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68539014 + NM_133509 RAD51B 0 . . . 2.49 79.65 36 7.56 Yes 74 -4.77 No 0 0 No -25 0.51 No 48 58.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108194481 + NM_000051 ATM 0 . . . 6.56 84.2 23 6.55 Yes 9 0.56 No 0 0 No -22 0.86 Yes 42 54.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68735479 + NM_133509 RAD51B 0 . . . 3.14 82.9 43 6.63 Yes 46 0.33 No 0 0 No -42 0.92 Yes 46 48.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41024458 + NM_001164269 RAD51 0 . . . 4.95 80.36 22 4.8 No 34 0.84 Yes 0 0 No -21 0.97 Yes 49 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68980686 + NM_133509 RAD51B 0 . . . 5.67 79.47 27 6 Yes 11 0.53 No 0 0 No -26 0.57 No 47 66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68730479 + NM_133509 RAD51B 0 . . . 3.43 62.21 23 5.16 No 16 0.35 No 0 0 No -22 0.71 Yes 41 71.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94159743 - NM_005591 MRE11 0 . . . 4.92 88.86 26 7.14 Yes 25 0.33 No 0 0 No -28 0.77 Yes 38 74.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59870681 - NM_032043 BRIP1 0 . . . 0.56 0 23 5.74 Yes 34 0.79 Yes 0 0 No -22 0.49 No 43 75.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94162712 - NM_005591 MRE11 0 . . . 5.7 76.55 15 5.73 Yes 57 0.75 No 0 0 No -28 0.35 No 38 72.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190657654 + NM_000534 PMS1 0 . . . 2.67 84.22 18 5.74 Yes 31 0.77 No 0 0 No -26 0.74 Yes 50 63.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215635000 - NM_000465 BARD1 0 . . . 1.4 80.6 25 5.27 No 34 -2.89 No 0 0 No -59 0.79 Yes 45 67.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152373729 - NM_005431 XRCC2 0 . . . 1.56 80.15 32 5.97 Yes 33 1.21 Yes 0 0 No -26 0.69 Yes 25 69.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59806478 - NM_032043 BRIP1 0 . . . 2.99 79.63 27 6.5 Yes 2 0.98 Yes 0 0 No -30 0.68 Yes 56 47.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68417968 + NM_133509 RAD51B 0 . . . 1.05 71.71 25 5 No 49 -3.68 No 0 0 No -49 0.51 No 51 47.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131962826 + NM_005732 RAD50 0 . . . 1.41 79.25 32 4.28 No 76 1.17 Yes 0 0 No -31 0.62 No 50 85.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190730169 + NM_000534 PMS1 0 . . . 4.88 74.64 43 6.55 Yes 29 0.13 No 0 0 No -34 0.56 No 38 51.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108177406 + NM_000051 ATM 0 . . . 3.49 73.25 18 4.01 No 41 -3.43 No 0 0 No -20 0.81 Yes 44 90.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47756757 + NM_000251 MSH2 0 . . . 1.74 0 60 7.97 Yes 73 0.21 No 0 0 No -17 0.3 No 42 30.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215600885 - NM_000465 BARD1 0 . . . 3.84 75.34 19 5 No 10 0.47 No 0 0 No -26 0.74 Yes 48 40.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69002077 + NM_133509 RAD51B 0 . . . 3.82 83.93 15 5.29 No 49 1.99 Yes 0 0 No -24 0.46 No 47 84.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37046464 + NM_000249 MLH1 0 . . . 3.41 76.18 44 6.69 Yes 32 -2.96 No 0 0 No -25 0.69 Yes 51 83.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215661082 - NM_000465 BARD1 0 . . . 5.2 72.5 16 5.55 No 16 1.89 Yes 0 0 No -30 0.24 No 42 85.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41010392 + NM_001164269 RAD51 0 . . . 0.38 76.63 39 6.86 Yes 74 -4.73 No 0 0 No -33 0.65 No 48 38.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68656997 + NM_133509 RAD51B 0 . . . 4.84 77.3 21 5.1 No 52 0.5 No 0 0 No -20 0.8 Yes 38 75.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68633804 + NM_133509 RAD51B 0 . . . 0.58 59.66 39 6.55 Yes 46 0.19 No 0 0 No -36 0.51 No 46 56.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215589374 - NM_000465 BARD1 0 . . . 2.23 57.38 20 5.76 Yes 49 1.07 Yes 0 0 No -29 0.66 Yes 53 36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68745468 + NM_133509 RAD51B 0 . . . 3.64 0 34 6.29 Yes 31 1.25 Yes 0 0 No -36 0.71 Yes 47 28.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68353007 + NM_133509 RAD51B 0 . . . 2.82 74.83 30 5.17 No 45 0.77 No 0 0 No -27 0.24 No 45 44.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47734696 + NM_000251 MSH2 0 . . . 1.1 66.46 16 5.62 Yes 16 1.09 Yes 0 0 No -19 0.69 Yes 42 89.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68719279 + NM_133509 RAD51B 0 . . . 5.89 78.89 22 4.86 No 62 -1.2 No 0 0 No -26 0.59 No 51 61.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68310831 + NM_133509 RAD51B 0 . . . 1.44 72.34 25 5.38 No 9 0.63 No 0 0 No -22 0.65 No 37 65.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68321765 + NM_133509 RAD51B 0 . . . 1.23 68.39 16 4.69 No 60 -4.51 No 0 0 No -19 0.47 No 45 71.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68484945 + NM_133509 RAD51B 0 . . . 1.28 69.11 13 5.39 No 60 0.45 No 0 0 No -12 0.46 No 47 31.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69126846 + NM_133509 RAD51B 0 . . . 1.86 69.42 12 4.9 No -4 1.07 Yes 0 0 No -33 0.39 No 62 42.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89635201 + NM_000314 PTEN 0 . . . 4.53 75.78 33 4.1 No 57 1.39 Yes 0 0 No -21 0.77 Yes 45 92.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68466968 + NM_133509 RAD51B 0 . . . 5.65 76.91 36 4.99 No 65 1.52 Yes 22 0.79 Yes -17 0.37 No 39 78.31 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 68719477 + NM_133509 RAD51B 0 . . . 2.46 76.29 60 6.93 Yes 26 1.21 Yes 0 0 No -54 0.52 No 47 39.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90973814 - NM_002485 NBN 0 . . . 8.43 80.4 28 5.98 Yes 15 0.93 Yes 0 0 No -27 0.6 No 43 96.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37064878 + NM_000249 MLH1 0 . . . 5.94 86.37 19 7.07 Yes 44 -2.56 No 0 0 No -18 0.58 No 46 78.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68619418 + NM_133509 RAD51B 0 . . . 5.29 80.75 15 4.58 No 42 -2.81 No 0 0 No -18 0.72 Yes 49 83.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41207566 - NM_007294 BRCA1 0 . . . 3.44 86.56 16 5.1 No 8 0.21 No 0 0 No -19 0.6 No 50 83.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68737826 + NM_133509 RAD51B 0 . . . 5.37 72.78 25 5.57 Yes 5 1.04 Yes 0 0 No -24 0.83 Yes 47 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105191496 + NM_021930 RINT1 0 . . . 1.67 83.86 21 5.81 Yes 54 1.17 Yes 0 0 No -25 0.64 No 43 73.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29110693 - NM_001005735 CHEK2 0 . . . 4.9 82.71 37 6.52 Yes 4 1.25 Yes 0 0 No -26 0.75 Yes 51 90.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131923266 + NM_005732 RAD50 0 . . . 0.13 62.9 30 3.92 No 19 1.11 Yes 0 0 No -24 0.78 Yes 34 90.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68448978 + NM_133509 RAD51B 0 . . . 4.27 73.99 19 6.33 Yes 72 1.24 Yes 0 0 No -25 0.37 No 46 55.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68936203 + NM_133509 RAD51B 0 . . . 4.38 77.67 14 5.57 Yes 54 -2.18 No 0 0 No -24 0.36 No 48 49.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29129348 - NM_001005735 CHEK2 0 . . . 5.89 74.26 24 3.98 No 75 0.38 No 0 0 No -23 0.79 Yes 44 67.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68445897 + NM_133509 RAD51B 0 . . . 2.37 70.94 25 5 No 1 1.08 Yes 0 0 No -24 0.93 Yes 26 60.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215652537 - NM_000465 BARD1 0 . . . 6.06 75.48 32 6.34 Yes 65 0.85 Yes 0 0 No -25 0.78 Yes 47 90.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47752345 + NM_000251 MSH2 0 . . . 5.71 83.92 31 6.93 Yes 76 -3.34 No 0 0 No -30 0.83 Yes 44 57.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69050245 + NM_133509 RAD51B 0 . . . 2.57 67.88 23 4.16 No 16 0.53 No 0 0 No -22 0.95 Yes 14 86.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131903983 + NM_005732 RAD50 0 . . . 2.34 72.33 25 5.1 No 43 1.51 Yes 0 0 No -31 0.46 No 15 82.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59883057 - NM_032043 BRIP1 0 . . . 4.98 75.15 12 4.12 No 11 1.25 Yes 0 0 No -26 0.6 No 47 90.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47740715 + NM_000251 MSH2 0 . . . 3.33 62.31 40 7.42 Yes 74 1.12 Yes 0 0 No -39 0.57 No 46 71.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90991017 - NM_002485 NBN 0 . . . 6.07 76.58 39 5.48 No 64 0.29 No 0 0 No -34 0.41 No 40 56.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75517824 - NM_001040108 MLH3 0 . . . 7.36 80.17 16 4.79 No NA NA NA 0 0 No -20 0.86 Yes 47 40.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68865802 + NM_004360 CDH1 0 . . . 0.74 69.39 32 5.46 No 3 0.71 No 0 0 No -34 0.41 No 38 87.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89728358 + NM_000314 PTEN 0 . . . 2.26 70.41 30 6.19 Yes 25 1.41 Yes 0 0 No -29 0.7 Yes 46 90.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56808460 + NM_058216 RAD51C 0 . . . 5.38 77.73 45 7.62 Yes 44 1.09 Yes 0 0 No -44 0.94 Yes 50 78.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68419169 + NM_133509 RAD51B 0 . . . 2.89 68.63 22 7.28 Yes 5 0.16 No 0 0 No -21 0.85 Yes 34 63.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68871189 + NM_133509 RAD51B 0 . . . 4.4 0 50 6.62 Yes 16 0.84 Yes 0 0 No -21 0.52 No 42 61.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47719476 + NM_000251 MSH2 0 . . . 0.13 62.52 62 6.78 Yes 35 0.75 No 0 0 No -46 0.68 Yes 23 28.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68670152 + NM_133509 RAD51B 0 . . . 3.06 71.65 51 8.66 Yes 30 0.44 No 0 0 No -26 0.95 Yes 49 85.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47675108 + NM_000251 MSH2 0 . . . 3.6 85.02 9 5.2 No 4 1.05 Yes 0 0 No -25 0.55 No 54 73.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69056884 + NM_133509 RAD51B 0 . . . 4.92 78.16 26 4.41 No 21 0.23 No 0 0 No -25 0.78 Yes 50 57.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48033456 + NM_000179 MSH6 0 . . . 2.11 73.88 37 7.35 Yes 6 0.94 Yes 0 0 No -37 0.53 No 47 45.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32952252 + NM_000059 BRCA2 0 . . . 3.96 76.13 26 6.05 Yes 42 0.5 No 0 0 No -25 0.83 Yes 34 44.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47674862 + NM_000251 MSH2 0 . . . 0.95 0 25 4.87 No -2 0.19 No 0 0 No -24 0.59 No 43 89.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90965110 - NM_002485 NBN 0 . . . 7.07 71.55 22 4.8 No -3 0.36 No 0 0 No -20 0.66 Yes 44 51.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68918637 + NM_133509 RAD51B 0 . . . 0.07 72.94 34 6.12 Yes 44 -3.23 No 0 0 No -33 0.32 No 34 51.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21976551 - NM_000077 CDKN2A 0 . . . 5.14 83.82 17 4.52 No 4 1.6 Yes 0 0 No -23 0.63 No 44 55.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32915656 + NM_000059 BRCA2 0 . . . 0.83 0 40 6.22 Yes 59 0.22 No 0 0 No -31 0.67 Yes 49 33.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84404197 - NM_139076 FAM175A 0 . . . 0.85 69.22 37 5.64 Yes 13 1.75 Yes 0 0 No -36 0.32 No 45 81.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69101443 + NM_133509 RAD51B 0 . . . 1.96 52.18 15 4.99 No 43 -3.56 No 0 0 No -26 0.56 No 49 36.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52438540 - NM_004656 BAP1 0 . . . 0.46 71.68 43 6.16 Yes 73 1.53 Yes 0 0 No -22 0.78 Yes 51 45.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41019719 + NM_001164269 RAD51 0 . . . 4.63 75.26 27 4.98 No 67 -1.98 No 0 0 No -26 0.68 Yes 47 63.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190653213 + NM_000534 PMS1 0 . . . 0.94 87.1 22 5.29 No 66 0.46 No 0 0 No -22 0.49 No 45 81.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68366117 + NM_133509 RAD51B 0 . . . 0.7 75.98 25 5.59 Yes 22 1.53 Yes 0 0 No -24 0.38 No 36 67.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56806195 + NM_058216 RAD51C 0 . . . 2.02 76.78 14 4.99 No 36 1.64 Yes 0 0 No -24 0.54 No 47 92.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47702483 + NM_000251 MSH2 0 . . . 2.59 66.37 14 5.01 No 28 2.1 Yes 0 0 No -22 0.39 No 30 91.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47791221 + NM_000251 MSH2 0 . . . 1.88 65.19 33 6.52 Yes 43 1.31 Yes 0 0 No -32 0.28 No 59 35.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68636526 + NM_133509 RAD51B 0 . . . 0.05 70.39 19 4.9 No 29 0.91 Yes 0 0 No -18 0.3 No 43 60.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69102444 + NM_133509 RAD51B 0 . . . 2.48 74.6 25 5.57 Yes 65 1.01 Yes 0 0 No -24 0.92 Yes 46 83.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89706508 + NM_000314 PTEN 0 . . . 2.12 69.5 15 6.99 Yes 7 0.24 No 0 0 No -30 0.82 Yes 48 83.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108098560 + NM_000051 ATM 0 . . . 2.96 63.71 28 6.51 Yes 75 1.98 Yes 0 0 No -25 0.26 No 52 30.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29084256 - NM_001005735 CHEK2 0 . . . 3.57 67.96 27 5.48 No 74 0.06 No 0 0 No -26 0.67 Yes 46 82.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68455147 + NM_133509 RAD51B 0 . . . 2.08 76.63 45 5.4 No 58 -3.88 No 0 0 No -28 0.36 No 55 34.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41224212 - NM_007294 BRCA1 0 . . . 1.26 75.98 27 5.42 No 34 1.2 Yes 0 0 No -26 0.65 No 24 53.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68968704 + NM_133509 RAD51B 0 . . . 4.73 72.28 27 5.2 No 18 1.16 Yes 0 0 No -59 0.44 No 40 97.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68757935 + NM_133509 RAD51B 0 . . . 2.3 83.14 15 4.39 No 19 0.7 No 0 0 No -27 0.75 Yes 39 60.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131890876 + NM_005732 RAD50 0 . . . 8.3 82.53 13 4.36 No 19 1.97 Yes 0 0 No -24 0.33 No 39 89.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68340220 + NM_133509 RAD51B 0 . . . 0.31 52.76 28 4.74 No 70 -3.91 No 0 0 No -27 0.7 Yes 44 44.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68858864 + NM_133509 RAD51B 0 . . . 0.6 74.77 18 4.36 No 63 0.33 No 0 0 No -23 0.47 No 36 45.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84391894 - NM_139076 FAM175A 0 . . . 0 72.78 41 5.11 No 56 0.91 Yes 0 0 No -26 0.64 No 49 47.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89678356 + NM_000314 PTEN 0 . . . 5.96 88 16 6.24 Yes 12 -1.85 No 0 0 No -26 0.4 No 47 47.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131924840 + NM_005732 RAD50 0 . . . 2.29 80.86 23 5.74 Yes 60 0.67 No 0 0 No -22 0.5 No 44 81.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69127112 + NM_133509 RAD51B 0 . . . 5.02 75.2 34 5.7 Yes 22 0.73 No 0 0 No -33 0.48 No 43 94.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68764810 + NM_133509 RAD51B 0 . . . 3.77 81.44 22 5.25 No 29 -3.01 No 0 0 No -56 0.37 No 47 82.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68691456 + NM_133509 RAD51B 0 . . . 2.89 82.03 33 4.54 No 2 1.43 Yes 0 0 No -26 0.55 No 19 71.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32923578 + NM_000059 BRCA2 0 . . . 6.43 85.13 22 5.29 No 71 -3.55 No 0 0 No -21 0.76 Yes 53 31.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75487126 - NM_001040108 MLH3 0 . . . 4.25 73.98 19 5 No 44 1.37 Yes 0 0 No -8 0.22 No 39 40.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1212729 + NM_000455 STK11 0 . . . 3.58 80.12 66 9.98 Yes 12 1.27 Yes 0 0 No -29 0.58 No 46 93.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41003049 + NM_001164269 RAD51 0 . . . 7.12 76.21 25 4.86 No 12 0.75 No 0 0 No -23 0.39 No 32 55.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68721315 + NM_133509 RAD51B 0 . . . 2.29 68.84 16 5.1 No 75 0.68 No 0 0 No -27 0.92 Yes 43 41.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48033717 + NM_000179 MSH6 0 . . . 3.3 82.3 59 8.56 Yes -3 0.77 Yes 0 0 No -33 0.55 No 47 71.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89651052 + NM_000314 PTEN 0 . . . 0.53 70.34 23 4.66 No 69 1.76 Yes 0 0 No -22 0.53 No 45 59.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68820259 + NM_004360 CDH1 0 . . . 3.58 80.12 21 4.1 No 74 0.03 No 0 0 No -23 0.88 Yes 40 69.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190659259 + NM_000534 PMS1 0 . . . 8.32 84.35 16 6.04 Yes 33 0.89 Yes 0 0 No -19 0.47 No 52 42.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68625780 + NM_133509 RAD51B 0 . . . 7.75 79.25 19 4.8 No 15 0.28 No 0 0 No -56 0.82 Yes 43 75.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94171484 - NM_005591 MRE11 0 . . . 3.95 0 23 6.48 Yes 24 -2 No 0 0 No -22 0.61 No 49 34.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94191933 - NM_005591 MRE11 0 . . . 0.81 0 18 4.69 No 76 -5.58 No 0 0 No -17 0.66 No 40 89.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215668262 - NM_000465 BARD1 0 . . . 3.76 78.17 17 4.69 No 58 -3.83 No 0 0 No -21 0.31 No 50 64.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68653739 + NM_133509 RAD51B 0 . . . 1.28 67.82 32 5.82 Yes 28 -2.86 No 0 0 No -25 0.62 No 45 71.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47702334 + NM_000251 MSH2 0 . . . 1.89 73.57 23 5.78 Yes 17 -1.93 No 0 0 No -22 0.83 Yes 47 56.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215589087 - NM_000465 BARD1 0 . . . 4.81 75.57 16 4.68 No 17 1.5 Yes 0 0 No -22 0.32 No 41 82.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215625785 - NM_000465 BARD1 0 . . . 5.11 76.73 23 7.05 Yes 24 0.35 No 0 0 No -32 0.49 No 34 77.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108125611 + NM_000051 ATM 0 . . . 6.67 82.31 25 4.9 No 58 0.59 No 0 0 No -24 0.87 Yes 54 59.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48024138 + NM_000179 MSH6 0 . . . 0.51 56.88 36 5.09 No 65 -4.53 No 0 0 No -20 0.63 No 47 41.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104168970 - NM_001100119 XRCC3 0 . . . 0.01 0 24 5.97 Yes 25 -2.38 No 0 0 No -26 0.78 Yes 46 45.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89647640 + NM_000314 PTEN 0 . . . 0.47 69.96 16 3.99 No -1 0.08 No 0 0 No -21 0.85 Yes 51 74.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68771993 + NM_133509 RAD51B 0 . . . 1.55 67.7 26 4.43 No 6 0.54 No 0 0 No -28 0.76 Yes 40 69.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41000397 + NM_001164269 RAD51 0 . . . 3.6 85.02 11 5 No 4 1.05 Yes 0 0 No -22 0.65 No 54 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56812522 + NM_058216 RAD51C 0 . . . 4.55 85.07 28 5.37 No 64 0.96 Yes 0 0 No -47 0.85 Yes 37 97.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105182500 + NM_021930 RINT1 0 . . . 5.37 85.23 28 5.39 No 50 -2.93 No 0 0 No -27 0.49 No 43 39.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215641805 - NM_000465 BARD1 0 . . . 2.72 0 21 4.16 No 65 0.41 No 0 0 No -20 0.82 Yes 36 74.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94171761 - NM_005591 MRE11 0 . . . 7.55 88.51 29 6.36 Yes 36 1.28 Yes 0 0 No -28 0.64 No 46 40.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68325129 + NM_133509 RAD51B 0 . . . 4.26 74.85 33 6 Yes 13 0.78 Yes 0 0 No -32 0.41 No 45 78.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68414932 + NM_133509 RAD51B 0 . . . 1.21 69.68 23 4.56 No 37 0.56 No 0 0 No -21 0.8 Yes 53 39.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68794052 + NM_004360 CDH1 0 . . . 0.88 0 14 4.75 No 34 0.49 No 0 0 No -25 0.57 No 38 38.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40988237 + NM_001164269 RAD51 0 . . . 1.65 74.34 10 4.07 No 54 0.13 No 0 0 No -22 0.74 Yes 46 67.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68632470 + NM_133509 RAD51B 0 . . . 7.35 80.12 9 5.35 No 28 1.17 Yes 0 0 No -22 0.61 No 51 61.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40999740 + NM_001164269 RAD51 0 . . . 5.32 77.96 41 6.44 Yes 58 1.02 Yes 0 0 No -22 0.69 Yes 55 41.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69131768 + NM_133509 RAD51B 0 . . . 4.6 85.78 26 6.39 Yes 73 1.4 Yes 0 0 No -24 0.36 No 53 54.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56770916 + NM_058216 RAD51C 0 . . . 0.09 73.95 28 5.38 No 43 0.21 No 0 0 No -27 0.6 No 47 42.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68930388 + NM_133509 RAD51B 0 . . . 2.76 69.56 21 5.1 No 52 -2.79 No 0 0 No -20 0.74 Yes 48 56.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41243352 - NM_007294 BRCA1 0 . . . 0.06 0 23 5.19 No 35 0.9 Yes 0 0 No -22 0.64 No 18 35.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108197151 + NM_000051 ATM 0 . . . 2.42 72.3 50 7.14 Yes 75 -4.6 No 0 0 No -49 0.51 No 36 44.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68675544 + NM_133509 RAD51B 0 . . . 4 69.51 17 4.46 No 26 -2.33 No 0 0 No -16 0.62 No 45 94.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1218757 + NM_000455 STK11 0 . . . 1.7 0 21 5.2 No 55 1.46 Yes 0 0 No -20 0.84 Yes 39 64.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108222449 + NM_000051 ATM 0 . . . 0.91 71.79 16 4.69 No 51 -3.41 No 0 0 No -22 0.71 Yes 45 56.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68898190 + NM_133509 RAD51B 0 . . . 7.23 78.21 47 6.95 Yes 53 0.85 Yes 0 0 No -28 0.74 Yes 44 82.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47635732 + NM_000251 MSH2 0 . . . 4.77 83.11 17 4.58 No 23 0.85 Yes 0 0 No -21 0.39 No 35 73.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810750 + NM_004360 CDH1 0 . . . 6.8 79.46 33 4.83 No 68 -3.02 No 0 0 No -26 0.32 No 47 82.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90950230 - NM_002485 NBN 0 . . . 0.58 65.31 26 5.29 No 52 -4.16 No 0 0 No -25 0.68 Yes 59 28.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23636487 - NM_024675 PALB2 0 . . . 2.95 78.97 10 4 No 7 1.01 Yes 0 0 No -35 0.74 Yes 51 83.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105184711 + NM_021930 RINT1 0 . . . 0.45 0 26 5.5 No 72 0.79 Yes 0 0 No -26 0.5 No 42 57.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68609880 + NM_133509 RAD51B 0 . . . 5.19 74.26 21 4.79 No 7 0.44 No 0 0 No -23 0.42 No 51 75.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59759112 - NM_032043 BRIP1 0 . . . 1.36 65.02 40 7.36 Yes -1 -1.26 No 0 0 No -39 0.59 No 46 82.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68781647 + NM_133509 RAD51B 0 . . . 2.79 72.71 14 5.66 Yes 25 -1.99 No 0 0 No -25 0.42 No 48 91.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215612002 - NM_000465 BARD1 0 . . . 3.21 74.2 28 4.45 No 0 0.88 Yes 0 0 No -23 0.38 No 42 58.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23644644 - NM_024675 PALB2 0 . . . 5.9 82.65 19 4.36 No 24 1.39 Yes 0 0 No -18 0.87 Yes 45 73.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41248227 - NM_007294 BRCA1 0 . . . 2.24 80.12 22 4.78 No 7 1.16 Yes 0 0 No -21 0.93 Yes 51 81.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215650760 - NM_000465 BARD1 0 . . . 7.6 77.89 50 7.78 Yes 15 0.48 No 0 0 No -25 0.35 No 39 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41209532 - NM_007294 BRCA1 0 . . . 1.43 82.09 19 5.74 Yes 25 1.68 Yes 0 0 No -18 0.56 No 33 87.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104179626 - NM_001100119 XRCC3 0 . . . 0.18 69.54 29 5.86 Yes 6 -2.1 No 0 0 No -28 0.75 Yes 53 53.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68899274 + NM_133509 RAD51B 0 . . . 3.04 85.27 27 5.81 Yes 38 1.86 Yes 0 0 No -26 0.8 Yes 17 57.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190658306 + NM_000534 PMS1 0 . . . 3.22 73.66 32 6.54 Yes 46 -3.97 No 0 0 No -31 0.6 No 40 44.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89728860 + NM_000314 PTEN 0 . . . 5.9 88.28 10 3.07 No 54 0.1 No 0 0 No -18 0.59 No 40 96.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215593198 - NM_000465 BARD1 0 . . . 4.99 80.61 30 4.85 No 47 0.28 No 0 0 No -29 0.66 No 43 56.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56795543 + NM_058216 RAD51C 0 . . . 3.56 73.84 25 5.29 No 8 1.06 Yes 0 0 No -24 0.83 Yes 50 86.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69077138 + NM_133509 RAD51B 0 . . . 7.74 75.88 35 6.27 Yes 41 0.94 Yes 0 0 No -27 0.64 No 24 87.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59863173 - NM_032043 BRIP1 0 . . . 0.69 72.33 30 4.98 No -4 0.93 Yes 0 0 No -21 0.38 No 30 57.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68858554 + NM_133509 RAD51B 0 . . . 9.87 90.27 19 4.97 No 71 1.47 Yes 0 0 No -25 0.49 No 47 73.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75483080 - NM_001040108 MLH3 0 . . . 2.57 68.47 28 5.41 No 9 0.04 No 0 0 No -25 0.48 No 49 81.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215673032 - NM_000465 BARD1 0 . . . 5.33 86.9 21 5.17 No 8 1.14 Yes 0 0 No -20 0.61 No 50 94.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108240974 + NM_000051 ATM 0 . . . 3.24 74.07 30 8.08 Yes 60 1.08 Yes 0 0 No -29 0.9 Yes 42 96.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6025723 - NM_000535 PMS2 0 . . . 2.68 67.48 29 5.29 No 35 -2.56 No 0 0 No -29 0.86 Yes 42 80.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215588934 - NM_000465 BARD1 0 . . . 0.14 0 28 5.2 No 68 -0.68 No 0 0 No -27 0.55 No 28 73.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59850152 - NM_032043 BRIP1 0 . . . 3.87 81.65 15 5 No 53 0.54 No 0 0 No -13 0.31 No 14 71.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84385256 - NM_139076 FAM175A 0 . . . 3.56 71.21 79 10.58 Yes 59 1.46 Yes 0 0 No -42 0.83 Yes 42 93.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59869276 - NM_032043 BRIP1 0 . . . 6.33 93.63 23 7.35 Yes 66 0.29 No 0 0 No -22 0.93 Yes 46 88.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215615567 - NM_000465 BARD1 0 . . . 7.23 81.18 27 3.91 No 4 0.32 No 0 0 No -22 0.84 Yes 35 36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29129594 - NM_001005735 CHEK2 0 . . . 4.58 66.46 20 7.14 Yes 45 -0.93 No 0 0 No -19 0.52 No 25 41.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59809663 - NM_032043 BRIP1 0 . . . 1.57 65.82 28 5.2 No 61 -4.58 No 0 0 No -22 0.36 No 55 45.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47792998 + NM_000251 MSH2 0 . . . 1.35 80.46 20 4.9 No 38 0.21 No 0 0 No -37 0.26 No 44 62.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47748555 + NM_000251 MSH2 0 . . . 5.47 80.9 29 6.41 Yes 53 -1.87 No 0 0 No -28 0.64 No 65 23.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89661820 + NM_000314 PTEN 0 . . . 6.93 79.28 15 5.82 Yes 9 0.91 Yes 0 0 No -18 0.24 No 49 90.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89722795 + NM_000314 PTEN 0 . . . 4.43 76.75 28 6.95 Yes 68 1.5 Yes 0 0 No -27 0.8 Yes 51 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847311 + NM_133509 RAD51B 0 . . . 4.48 81.16 24 3.93 No 61 -5.44 No 0 0 No -29 0.23 No 53 36.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215603676 - NM_000465 BARD1 0 . . . 4.44 88.38 28 6.9 Yes 37 1.38 Yes 0 0 No -32 0.48 No 21 67.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68322165 + NM_133509 RAD51B 0 . . . 0.09 68.64 15 4.69 No 40 1.4 Yes 0 0 No -28 0.36 No 18 94.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69082623 + NM_133509 RAD51B 0 . . . 0.5 67.58 25 6.44 Yes 41 1.02 Yes 0 0 No -24 0.56 No 34 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131908356 + NM_005732 RAD50 0 . . . 6.13 82.22 24 5.19 No 41 0.58 No 0 0 No -23 0.9 Yes 38 65.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68438653 + NM_133509 RAD51B 0 . . . 3.74 61.38 16 4.69 No 52 -4.87 No 0 0 No -17 0.26 No 52 67.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47761908 + NM_000251 MSH2 0 . . . 1.41 73.87 31 5.49 No 66 1.81 Yes 0 0 No -30 0.7 Yes 19 36.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41273484 - NM_007294 BRCA1 0 . . . 5.92 82.31 29 5.56 Yes 57 0.99 Yes 0 0 No -28 0.67 Yes 55 45.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68775258 + NM_133509 RAD51B 0 . . . 10.52 80.07 14 3.87 No 10 0.13 No 0 0 No -27 0.86 Yes 45 87.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59797728 - NM_032043 BRIP1 0 . . . 4.98 74.1 18 5.38 No 58 0.27 No 0 0 No -26 0.54 No 43 78.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215614770 - NM_000465 BARD1 0 . . . 0.2 72.11 33 5.77 Yes 68 -3.64 No 0 0 No -29 0.35 No 50 75.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56808063 + NM_058216 RAD51C 0 . . . 1.2 72.65 32 8.41 Yes 54 0.24 No 0 0 No -31 0.46 No 43 39.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68830642 + NM_133509 RAD51B 0 . . . 0.21 0 53 7.42 Yes -1 -1.22 No 0 0 No -41 0.59 No 46 29.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56768781 + NM_058216 RAD51C 0 . . . 2.41 78.83 23 5.74 Yes 4 1.67 Yes 0 0 No -22 0.65 No 54 84.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131896110 + NM_005732 RAD50 0 . . . 7.1 82.59 27 5.36 No 76 1.35 Yes 0 0 No -24 0.71 Yes 41 63.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69091466 + NM_133509 RAD51B 0 . . . 7 82.48 22 6.16 Yes 60 -4.1 No 0 0 No -21 0.92 Yes 44 64.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47775759 + NM_000251 MSH2 0 . . . 8.49 88.89 29 5.66 Yes 1 1.95 Yes 0 0 No -28 0.88 Yes 38 73.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215619577 - NM_000465 BARD1 0 . . . 6.1 84.53 15 5.39 No 72 0.51 No 0 0 No -22 0.4 No 45 82.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68444036 + NM_133509 RAD51B 0 . . . 1.48 74.92 15 5.44 No 36 0.83 Yes 0 0 No -25 0.47 No 51 55.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47761478 + NM_000251 MSH2 0 . . . 6.9 68.27 20 5.09 No 9 1.42 Yes 0 0 No -19 0.57 No 49 71.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68527758 + NM_133509 RAD51B 0 . . . 3.31 0 27 6.27 Yes 21 0.83 Yes 0 0 No -26 0.89 Yes 37 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68705690 + NM_133509 RAD51B 0 . . . 2.82 74.91 25 4.45 No 20 1.03 Yes 0 0 No -24 0.59 No 47 45.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47770128 + NM_000251 MSH2 0 . . . 0.36 81.43 20 6.08 Yes 27 1.37 Yes 0 0 No -19 0.45 No 55 51.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68741674 + NM_133509 RAD51B 0 . . . 3.45 71.9 50 7.98 Yes 43 -2.72 No 0 0 No -49 0.55 No 42 78.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68775919 + NM_004360 CDH1 0 . . . 8.28 80.1 19 6.32 Yes 30 1.6 Yes 0 0 No -30 0.66 No 40 75.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69130871 + NM_133509 RAD51B 0 . . . 5.93 78.85 26 5.66 Yes 16 0.26 No 0 0 No -25 0.89 Yes 45 73.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68377745 + NM_133509 RAD51B 0 . . . 2.52 78.28 18 5.5 No 39 1.03 Yes 0 0 No -26 0.56 No 19 71.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215638957 - NM_000465 BARD1 0 . . . 0.79 71.89 31 8.21 Yes 59 1.12 Yes 0 0 No -30 0.81 Yes 38 79.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68324202 + NM_133509 RAD51B 0 . . . 8.74 84.42 21 5.09 No 23 1.06 Yes 0 0 No -24 0.68 Yes 42 79.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45806089 - NM_001048171 MUTYH 0 . . . 1.43 0 21 5.57 Yes 73 0.07 No 0 0 No -20 0.74 Yes 42 28.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32911847 + NM_000059 BRCA2 0 . . . 2.41 75.79 18 4.3 No 71 -5.02 No 0 0 No -21 0.74 Yes 50 63.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59850416 - NM_032043 BRIP1 0 . . . 9.97 83.19 14 6.08 Yes 54 1.02 Yes 0 0 No -32 0.52 No 44 75.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89721486 + NM_000314 PTEN 0 . . . 6.71 78.39 10 4.68 No 6 1.5 Yes 0 0 No -21 0.42 No 52 87.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68627424 + NM_133509 RAD51B 0 . . . 7.08 73.34 43 7.67 Yes 50 0.84 Yes 0 0 No -42 0.51 No 36 52.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47794114 + NM_000251 MSH2 0 . . . 4.16 72.48 22 4.9 No 39 -3.34 No 0 0 No -21 0.78 Yes 52 89.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68914736 + NM_133509 RAD51B 0 . . . 4.18 72.6 24 6.99 Yes 59 0.97 Yes 0 0 No -23 0.82 Yes 45 60.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69055929 + NM_133509 RAD51B 0 . . . 0.36 58.53 44 6.77 Yes 50 -4.87 No 0 0 No -34 0.41 No 46 21.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41272372 - NM_007294 BRCA1 0 . . . 5.23 74.8 34 7.71 Yes 49 0.38 No 0 0 No -33 0.81 Yes 46 68.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190690934 + NM_000534 PMS1 0 . . . 0.64 60.11 17 3.81 No 70 -0.97 No 0 0 No -16 0.75 Yes 32 38.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68784652 + NM_004360 CDH1 0 . . . 4.06 89.33 22 4.97 No 60 0.14 No 0 0 No -21 0.64 No 12 49.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1220034 + NM_000455 STK11 0 . . . 2.48 77.98 25 5.36 No 69 0.36 No 0 0 No -22 0.75 Yes 36 76.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68746904 + NM_133509 RAD51B 0 . . . 5.07 70.36 17 3.39 No 12 0.86 Yes 0 0 No -43 0.76 Yes 46 94.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75481878 - NM_001040108 MLH3 0 . . . 8.22 80.4 19 6.32 Yes 13 0.95 Yes 0 0 No -18 0.71 Yes 45 95.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68372058 + NM_133509 RAD51B 0 . . . 2.65 68.11 21 5.05 No 70 2.39 Yes 0 0 No -20 0.63 No 43 79.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47652563 + NM_000251 MSH2 0 . . . 8.41 84.21 20 5.24 No 43 0.93 Yes 0 0 No -19 0.58 No 43 59.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68768884 + NM_133509 RAD51B 0 . . . 0.85 66.03 20 4.58 No -1 0.56 No 0 0 No -50 0.28 No 46 62.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68912081 + NM_133509 RAD51B 0 . . . 3.48 70 27 5.2 No 4 1.08 Yes 0 0 No -56 0.73 Yes 46 86.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41270244 - NM_007294 BRCA1 0 . . . 6.31 83.45 25 4.54 No 64 1.19 Yes 0 0 No -25 0.78 Yes 44 58.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152370653 - NM_005431 XRCC2 0 . . . 5.03 65.69 28 5.29 No 75 1.57 Yes 0 0 No -21 0.67 Yes 42 58.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68623390 + NM_133509 RAD51B 0 . . . 4.19 65.83 38 6.36 Yes 42 0.72 No 0 0 No -37 0.66 No 41 51.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59931904 - NM_032043 BRIP1 0 . . . 3.6 85.02 15 4.64 No 4 1.2 Yes 0 0 No -24 0.61 No 54 51.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47771079 + NM_000251 MSH2 0 . . . 3.4 83.97 17 4.8 No 39 0.66 No 0 0 No -22 0.61 No 19 37.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47720901 + NM_000251 MSH2 0 . . . 0.48 65.68 23 5.39 No 49 0.25 No 0 0 No -22 0.75 Yes 24 62.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079314 + NM_000249 MLH1 0 . . . 4.43 85.02 17 4 No 66 1.3 Yes 0 0 No -31 0.69 Yes 43 52.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68665802 + NM_133509 RAD51B 0 . . . 3.79 59.3 21 5.2 No 30 0.64 No 0 0 No -20 0.74 Yes 28 68.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673241 + NM_000534 PMS1 0 . . . 5.7 86.46 38 6.8 Yes 24 -0.01 No 0 0 No -26 0.91 Yes 47 46.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94197846 - NM_005591 MRE11 0 . . . 3.35 68.37 28 4.76 No 23 1.08 Yes 0 0 No -23 0.49 No 35 82.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68308865 + NM_133509 RAD51B 0 . . . 7.54 85.96 11 4.12 No 36 1.53 Yes 0 0 No -32 0.55 No 46 57.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33437932 - NM_002878 RAD51D 0 . . . 0.42 74.73 19 3.83 No 32 1.3 Yes 0 0 No -23 0.67 Yes 40 80.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59767051 - NM_032043 BRIP1 0 . . . 0.16 63.3 14 7.35 Yes 22 1.3 Yes 0 0 No -20 0.53 No 44 84.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1206371 + NM_000455 STK11 0 . . . 3.69 79.91 27 6.39 Yes NA NA NA 0 0 No -26 0.73 Yes 50 53.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41199041 - NM_007294 BRCA1 0 . . . 3.92 74.62 15 5.66 Yes 28 1 Yes 0 0 No -22 0.5 No 52 78.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68581167 + NM_133509 RAD51B 0 . . . 6.32 78.04 21 7.21 Yes 58 2.15 Yes 0 0 No -20 0.81 Yes 38 71.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33428305 - NM_002878 RAD51D 0 . . . 1.21 0 19 4.28 No 26 0.66 No 0 0 No -26 0.81 Yes 32 40.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68563001 + NM_133509 RAD51B 0 . . . 2.42 0 21 4.69 No 71 1.44 Yes 0 0 No -20 0.93 Yes 37 65.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29124960 - NM_001005735 CHEK2 0 . . . 2.17 83.28 38 6.63 Yes 65 0.36 No 0 0 No -32 0.32 No 40 80.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68623125 + NM_133509 RAD51B 0 . . . 4.65 81.43 13 4.36 No 57 1.12 Yes 0 0 No -32 0.32 No 39 70.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215666922 - NM_000465 BARD1 0 . . . 0.54 67.18 18 4.1 No 28 1.11 Yes 0 0 No -23 0.47 No 50 70.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68493790 + NM_133509 RAD51B 0 . . . 3.6 72.56 48 6.86 Yes 9 1.22 Yes 0 0 No -40 0.6 No 49 62.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37092099 + NM_000249 MLH1 0 . . . 1.95 72.4 29 7.35 Yes 37 1.7 Yes 0 0 No -28 0.91 Yes 21 83.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68633835 + NM_133509 RAD51B 0 . . . 2.59 60.14 21 4.84 No 13 0.23 No 0 0 No -20 0.79 Yes 45 51.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94163978 - NM_005591 MRE11 0 . . . 2.08 71.61 29 5.66 Yes 13 0.58 No 0 0 No -25 0.53 No 45 65.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105181750 + NM_021930 RINT1 0 . . . 1.6 56.45 10 3.84 No 75 0.96 Yes 0 0 No -29 0.81 Yes 43 77.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68799576 + NM_004360 CDH1 0 . . . 4.85 82 19 5.48 No 14 1.01 Yes 0 0 No -18 0.76 Yes 44 86.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47801580 + NM_000251 MSH2 0 . . . 0.87 62.03 25 4.66 No 32 1.04 Yes 0 0 No -24 0.75 Yes 26 74.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68658415 + NM_133509 RAD51B 0 . . . 2.81 75.34 18 4.34 No 6 0.34 No 0 0 No -31 0.64 No 52 79.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68445045 + NM_133509 RAD51B 0 . . . 8.64 84.24 29 5.65 Yes 5 1.29 Yes 0 0 No -23 0.57 No 38 46.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32893834 + NM_000059 BRCA2 0 . . . 0.76 60.43 27 4.71 No 47 0.78 Yes 0 0 No -26 0.5 No 49 39.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29137111 - NM_001005735 CHEK2 0 . . . 6.59 90.95 32 5.57 Yes 50 1.24 Yes 0 0 No -31 0.72 Yes 11 74.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89626168 + NM_000314 PTEN 0 . . . 1.34 74.96 31 7.9 Yes 8 0.79 Yes 0 0 No -25 0.83 Yes 44 65.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69005312 + NM_133509 RAD51B 0 . . . 2.75 72.1 12 3.72 No 4 -2.34 No 0 0 No -42 0.6 No 47 37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69080434 + NM_133509 RAD51B 0 . . . 3.27 70.85 18 5.25 No 21 1.3 Yes 0 0 No -25 0.86 Yes 37 82.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68446195 + NM_133509 RAD51B 0 . . . 3.45 73.36 31 5.97 Yes 4 1.3 Yes 0 0 No -30 0.84 Yes 38 74.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94221393 - NM_005591 MRE11 0 . . . 0.4 72.02 16 4.47 No 76 0.57 No 0 0 No -24 0.53 No 23 56.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68875622 + NM_133509 RAD51B 0 . . . 2.79 70.43 23 5.32 No 39 0.5 No 0 0 No -42 0.87 Yes 38 58.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108173052 + NM_000051 ATM 0 . . . 3.78 80.16 19 3.52 No 21 1.32 Yes 0 0 No -26 0.7 Yes 37 88.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94216975 - NM_005591 MRE11 0 . . . 7.67 77.45 15 5.57 Yes 65 1.8 Yes 0 0 No -28 0.31 No 11 57.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47735506 + NM_000251 MSH2 0 . . . 8.3 83.56 16 5.49 No 55 -0.9 No 0 0 No -18 0.47 No 45 65.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68860822 + NM_004360 CDH1 0 . . . 2.53 0 14 6.06 Yes 74 0.19 No 0 0 No -21 0.76 Yes 34 67.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190656097 + NM_000534 PMS1 0 . . . 0.3 74.09 18 5.57 Yes 68 0.65 No 0 0 No -31 0.42 No 34 63.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94150189 - NM_005591 MRE11 0 . . . 5.26 80.22 17 5.51 No 75 -5.68 No 0 0 No -30 0.46 No 43 49.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59804744 - NM_032043 BRIP1 0 . . . 1.06 0 17 7.7 Yes 1 0.08 No 0 0 No -40 0.82 Yes 46 71.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94174074 - NM_005591 MRE11 0 . . . 2.69 59.57 59 6.27 Yes 26 1.25 Yes 0 0 No -37 0.46 No 21 57.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68682365 + NM_133509 RAD51B 0 . . . 0.62 73.44 27 5.29 No 5 0.81 Yes 0 0 No -26 0.79 Yes 53 50.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47797667 + NM_000251 MSH2 0 . . . 5.61 79.06 18 4.12 No NA NA NA 0 0 No -21 0.51 No 38 39.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41202874 - NM_007294 BRCA1 0 . . . 6.19 74.22 22 4.9 No 37 0.6 No 0 0 No -21 0.81 Yes 50 48.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69135642 + NM_133509 RAD51B 0 . . . 1.13 74.91 21 4.35 No 30 -1.83 No 0 0 No -23 0.38 No 46 51.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47706228 + NM_000251 MSH2 0 . . . 5.87 75.1 23 5.39 No 42 0.04 No 0 0 No -22 0.88 Yes 42 71.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59782193 - NM_032043 BRIP1 0 . . . 1.16 79.36 27 5.04 No 57 -5.54 No 0 0 No -22 0.51 No 63 34.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75508320 - NM_001040108 MLH3 0 . . . 1.92 80.02 30 5.29 No 36 0.24 No 0 0 No -29 0.8 Yes 50 46.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32895377 + NM_000059 BRCA2 0 . . . 2.09 58.82 24 4.34 No 9 0.25 No 0 0 No -23 0.61 No 49 58.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89688186 + NM_000314 PTEN 0 . . . 2.35 73.07 20 5.53 No 18 0.45 No 0 0 No -24 0.34 No 45 62.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89622439 + NM_000314 PTEN 0 . . . 3.22 0 68 7.77 Yes 15 1.17 Yes 0 0 No -41 0.7 Yes 43 97.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68609863 + NM_133509 RAD51B 0 . . . 3.14 69.7 19 6.46 Yes 63 0.51 No 0 0 No -18 0.67 Yes 46 70.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23638788 - NM_024675 PALB2 0 . . . 3.89 84.17 18 3.79 No 40 0.73 No 0 0 No -46 0.89 Yes 12 59.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68543042 + NM_133509 RAD51B 0 . . . 2.25 72.38 13 4.36 No -1 0.67 No 0 0 No -31 0.39 No 48 46.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40992401 + NM_001164269 RAD51 0 . . . 6.02 88.43 19 5.14 No 4 2.01 Yes 0 0 No -25 0.51 No 46 90.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131929539 + NM_005732 RAD50 0 . . . 1.49 73.88 39 5.07 No 72 -6.28 No 0 0 No -32 0.56 No 47 52.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59904171 - NM_032043 BRIP1 0 . . . 4.42 80.56 17 5.28 No 5 1.01 Yes 0 0 No -21 0.91 Yes 53 55.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47653311 + NM_000251 MSH2 0 . . . 3.01 0 26 5.73 Yes 18 0.87 Yes 0 0 No -37 0.72 Yes 39 74.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190680648 + NM_000534 PMS1 0 . . . 10.47 81.15 19 4.47 No 26 1.07 Yes 0 0 No -18 0.81 Yes 43 75.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190671908 + NM_000534 PMS1 0 . . . 6.83 85.47 26 5.41 No 46 1.69 Yes 0 0 No -24 0.32 No 44 58.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152358965 - NM_005431 XRCC2 0 . . . 8.91 84.66 12 5 No -3 0.39 No 0 0 No -29 0.34 No 33 76.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32892001 + NM_000059 BRCA2 0 . . . 1.94 77.12 48 5.24 No 11 0.44 No 0 0 No -47 0.55 No 47 71.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47720987 + NM_000251 MSH2 0 . . . 0.4 0 19 5.48 No 56 0.91 Yes 0 0 No -23 0.7 Yes 42 63.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68305372 + NM_133509 RAD51B 0 . . . 1.35 77.92 33 5.53 No 35 1.05 Yes 0 0 No -17 0.68 Yes 23 86.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190737489 + NM_000534 PMS1 0 . . . 0.37 0 19 4.71 No 45 0.94 Yes 0 0 No -57 0.59 No 43 31.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89655190 + NM_000314 PTEN 0 . . . 4.44 80.03 34 5.83 Yes 4 0.32 No 0 0 No -33 0.48 No 47 76.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190670057 + NM_000534 PMS1 0 . . . 0.89 83.55 31 5.98 Yes 67 0.59 No 0 0 No -30 0.61 No 47 43.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131933480 + NM_005732 RAD50 0 . . . 2.55 66.56 15 6.32 Yes 67 0.74 No 0 0 No -25 0.37 No 39 86.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89727563 + NM_000314 PTEN 0 . . . 0.18 69.62 17 4.36 No 30 0.67 No 0 0 No -49 0.36 No 41 84.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68362913 + NM_133509 RAD51B 0 . . . 6 75.97 30 8.5 Yes 8 0.63 No 0 0 No -29 0.88 Yes 50 43.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108222824 + NM_000051 ATM 0 . . . 1.42 63.23 17 6.08 Yes -4 0.17 No 0 0 No -16 0.72 Yes 62 31.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68905950 + NM_133509 RAD51B 0 . . . 1.72 0 21 4.9 No 28 1.3 Yes 0 0 No -20 0.72 Yes 30 96.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68291228 + NM_133509 RAD51B 0 . . . 1.47 79.53 30 8.25 Yes 76 0.9 Yes 0 0 No -29 0.85 Yes 50 66.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68598638 + NM_133509 RAD51B 0 . . . 1.84 61.06 29 8.38 Yes 64 -5.51 No 0 0 No -27 0.53 No 39 71.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21989318 - NM_000077 CDKN2A 0 . . . 2.17 77.32 31 5.92 Yes 56 -4.73 No 0 0 No -30 0.88 Yes 46 49.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59866544 - NM_032043 BRIP1 0 . . . 3.97 84.11 29 6.32 Yes 10 1.29 Yes 0 0 No -28 0.91 Yes 42 90.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90971833 - NM_002485 NBN 0 . . . 0.82 60.6 32 6 Yes 51 0.85 Yes 0 0 No -31 0.88 Yes 44 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68906372 + NM_133509 RAD51B 0 . . . 4.3 72.71 37 6.48 Yes 21 0.23 No 0 0 No -36 0.85 Yes 37 45.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84389819 - NM_139076 FAM175A 0 . . . 2.45 69.43 26 5.48 No 31 -2.47 No 0 0 No -25 0.94 Yes 43 52.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23642927 - NM_024675 PALB2 0 . . . 0.24 0 11 5.83 Yes 2 0.15 No 0 0 No -28 0.77 Yes 51 83.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59812417 - NM_032043 BRIP1 0 . . . 7.03 76.78 38 8.3 Yes 59 -4.87 No 0 0 No -29 0.54 No 49 72.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68865204 + NM_004360 CDH1 0 . . . 2.47 70.4 16 5.09 No 30 0.35 No 0 0 No -19 0.42 No 56 23.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41243820 - NM_007294 BRCA1 0 . . . 1.88 0 15 5.4 No 14 0.16 No 0 0 No -25 0.59 No 44 33.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68933851 + NM_133509 RAD51B 0 . . . 3.78 87.39 27 5 No 34 0.83 Yes 0 0 No -57 0.37 No 52 87.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69116652 + NM_133509 RAD51B 0 . . . 2.4 77.75 36 5.76 Yes 7 0.22 No 0 0 No -35 0.91 Yes 45 47.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33447488 - NM_002878 RAD51D 0 . . . 2.79 75.57 34 5.72 Yes 2 1.67 Yes 0 0 No -23 0.46 No 48 68.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152351614 - NM_005431 XRCC2 0 . . . 0.59 64.33 39 6.04 Yes 48 0.43 No 0 0 No -38 0.67 Yes 37 41.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32896414 + NM_000059 BRCA2 0 . . . 3.96 78.76 18 5.4 No 9 0.02 No 0 0 No -24 0.38 No 49 76.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131918082 + NM_005732 RAD50 0 . . . 1.62 75.14 11 4.12 No 66 0.58 No 0 0 No -32 0.76 Yes 50 74.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56789086 + NM_058216 RAD51C 0 . . . 3.09 76.69 49 7.63 Yes 11 0.38 No 0 0 No -33 0.38 No 47 57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21985040 - NM_000077 CDKN2A 0 . . . 0.11 73.69 33 6.9 Yes 4 0.22 No 0 0 No -28 0.53 No 58 63.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75502061 - NM_001040108 MLH3 0 . . . 3.1 85.02 41 4.44 No 3 1.02 Yes 0 0 No -22 0.81 Yes 44 66.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89657370 + NM_000314 PTEN 0 . . . 2.05 72.32 39 5.83 Yes 71 1.49 Yes 0 0 No -25 0.51 No 47 74.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68859663 + NM_133509 RAD51B 0 . . . 0.92 0 14 5.65 Yes 17 0.8 Yes 0 0 No -25 0.74 Yes 41 90.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68866447 + NM_133509 RAD51B 0 . . . 3.98 81.47 17 5.64 Yes 71 0.15 No 0 0 No -36 0.49 No 53 64.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131898336 + NM_005732 RAD50 0 . . . 4 71.69 43 6.43 Yes 73 -6.39 No 0 0 No -32 0.73 Yes 45 39.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68780448 + NM_133509 RAD51B 0 . . . 1.35 0 17 6.93 Yes 3 1.19 Yes 0 0 No -25 0.54 No 39 39.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41273990 - NM_007294 BRCA1 0 . . . 0.5 67.7 15 4.47 No 51 -3.77 No 0 0 No -21 0.58 No 41 48.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68826799 + NM_133509 RAD51B 0 . . . 1.87 58.4 41 6.32 Yes 1 0.06 No 0 0 No -20 0.62 No 41 31.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47683591 + NM_000251 MSH2 0 . . . 5.95 77.66 16 4.06 No 0 1.09 Yes 0 0 No -35 0.66 No 41 74.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108101886 + NM_000051 ATM 0 . . . 2.07 74.67 31 6.72 Yes 12 1.52 Yes 0 0 No -31 0.4 No 41 64.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131966996 + NM_005732 RAD50 0 . . . 2.24 80.12 50 7.75 Yes 7 1.16 Yes 0 0 No -49 0.79 Yes 43 66.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94178045 - NM_005591 MRE11 0 . . . 4.65 80.38 24 5.29 No 47 1.18 Yes 0 0 No -21 0.65 No 45 89.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32939138 + NM_000059 BRCA2 0 . . . 5.46 83.55 19 4.62 No 51 -4.19 No 0 0 No -23 0.53 No 47 60.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69054475 + NM_133509 RAD51B 0 . . . 1.94 84.18 26 3.85 No 10 1.1 Yes 0 0 No -26 0.87 Yes 48 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131919480 + NM_005732 RAD50 0 . . . 7.17 87.26 28 5.57 Yes 9 1.13 Yes 0 0 No -28 0.79 Yes 49 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47676937 + NM_000251 MSH2 0 . . . 2.74 70.38 18 5.4 No 31 0.5 No 0 0 No -23 0.54 No 50 38.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59817566 - NM_032043 BRIP1 0 . . . 2.52 71.24 31 5.66 Yes 74 -0.27 No 0 0 No -30 0.91 Yes 20 53.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108231141 + NM_000051 ATM 0 . . . 1.59 68.48 28 5.28 No 58 -1.63 No 0 0 No -21 0.85 Yes 41 84.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68835078 + NM_133509 RAD51B 0 . . . 4.47 65.17 24 4.66 No 31 0.82 Yes 0 0 No -23 0.32 No 44 83.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75506794 - NM_001040108 MLH3 0 . . . 2.51 68.36 23 6.23 Yes 36 0.67 No 0 0 No -30 0.46 No 47 78.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47700835 + NM_000251 MSH2 0 . . . 2.28 80.22 18 4.76 No 67 -4.96 No 0 0 No -24 0.58 No 53 44.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68381084 + NM_133509 RAD51B 0 . . . 1.65 73.97 30 7.21 Yes 63 0.34 No 0 0 No -29 0.81 Yes 29 68.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215640944 - NM_000465 BARD1 0 . . . 1.08 68.74 57 6.8 Yes 25 2.62 Yes 0 0 No -27 0.5 No 33 82.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59871140 - NM_032043 BRIP1 0 . . . 4.62 67.88 29 5.82 Yes 71 0.77 Yes 0 0 No -28 0.76 Yes 40 47.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69128257 + NM_133509 RAD51B 0 . . . 5.28 75.5 41 7.29 Yes 15 0.52 No 0 0 No -25 0.6 No 43 88.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75520089 - NM_001040108 MLH3 0 . . . 4.11 80.45 23 5.05 No 14 0.57 No 0 0 No -22 0.46 No 44 93.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59834492 - NM_032043 BRIP1 0 . . . 1.34 0 18 4.13 No 46 0.55 No 0 0 No -26 0.92 Yes 28 56.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190722049 + NM_000534 PMS1 0 . . . 6.02 80.39 19 4.39 No 2 0.18 No 25 0.35 Yes -28 0.8 Yes 47 47.36 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 41228344 - NM_007294 BRCA1 0 . . . 8.65 81 14 4.47 No 72 0.78 Yes 0 0 No -31 0.59 No 40 56.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68685589 + NM_133509 RAD51B 0 . . . 1.37 67.04 13 4.64 No -2 0.7 No 0 0 No -24 0.35 No 46 34.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90965744 - NM_002485 NBN 0 . . . 3.41 85.15 30 6 Yes 0 1.24 Yes 0 0 No -29 0.93 Yes 50 93.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52435851 - NM_004656 BAP1 0 . . . 6.55 80.13 49 6.25 Yes 60 1.22 Yes 0 0 No -19 0.83 Yes 49 78.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68713590 + NM_133509 RAD51B 0 . . . 4.79 77.9 19 4.69 No 48 0.22 No 0 0 No -18 0.76 Yes 52 57.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59827774 - NM_032043 BRIP1 0 . . . 11.06 88.27 42 6.74 Yes 61 0.64 No 0 0 No -41 0.55 No 43 75.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56813433 + NM_058216 RAD51C 0 . . . 1.98 72.58 23 4.82 No 35 0.36 No 0 0 No -22 0.74 Yes 16 66.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23627109 - NM_024675 PALB2 0 . . . 3.04 86.01 30 5.66 Yes 3 1.09 Yes 0 0 No -29 0.49 No 55 34.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56782956 + NM_058216 RAD51C 0 . . . 2.41 68.34 30 4.98 No 21 0.98 Yes 0 0 No -29 0.64 No 37 70.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68293605 + NM_133509 RAD51B 0 . . . 3.61 75.65 29 5.92 Yes NA NA NA 0 0 No -28 0.82 Yes 29 60.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68812559 + NM_004360 CDH1 0 . . . 0.19 69.53 22 6.16 Yes 13 0.17 No 0 0 No -28 0.67 Yes 40 51.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41253566 - NM_007294 BRCA1 0 . . . 0.94 76.63 36 7.06 Yes 40 -2.96 No 0 0 No -33 0.48 No 48 36.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89733677 + NM_000314 PTEN 0 . . . 0.68 66.48 32 5.99 Yes 16 -1.4 No 0 0 No -31 0.64 No 32 29.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90995407 - NM_002485 NBN 0 . . . 4.54 86.88 15 4.58 No -1 0.71 No 0 0 No -30 0.56 No 43 80.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48034501 + NM_000179 MSH6 0 . . . 7.46 80.16 31 6.4 Yes 30 0.16 No 0 0 No -30 0.58 No 51 78.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68483957 + NM_133509 RAD51B 0 . . . 4.17 87.29 23 5.08 No 2 0.81 Yes 0 0 No -22 0.79 Yes 13 44.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37036903 + NM_000249 MLH1 0 . . . 3.54 84.79 19 4.69 No 42 1.53 Yes 0 0 No -43 0.38 No 20 80.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190709989 + NM_000534 PMS1 0 . . . 3.4 71.54 35 6.08 Yes 66 0.41 No 0 0 No -34 0.7 Yes 45 60.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68526946 + NM_133509 RAD51B 0 . . . 3.99 80.23 24 4.8 No 45 0.97 Yes 0 0 No -23 0.72 Yes 47 72.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69122680 + NM_133509 RAD51B 0 . . . 0.66 67.72 17 5.92 Yes 33 1.2 Yes 0 0 No -16 0.33 No 54 42.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68719509 + NM_133509 RAD51B 0 . . . 5.46 79.9 26 3.7 No 58 1.2 Yes 0 0 No -25 0.94 Yes 35 43.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29109197 - NM_001005735 CHEK2 0 . . . 2.36 70.97 10 4.04 No 60 0.8 Yes 0 0 No -26 0.32 No 47 18.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68769973 + NM_133509 RAD51B 0 . . . 1.02 73 52 5.39 No -3 0.65 No 0 0 No -31 0.42 No 46 46.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47659964 + NM_000251 MSH2 0 . . . 8.54 87.97 14 4.9 No 46 0.5 No 0 0 No -21 0.82 Yes 48 34.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042984 - NM_000535 PMS2 0 . . . 2.13 77.92 16 6.03 Yes 24 -1.66 No 0 0 No -30 0.36 No 47 89.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68695732 + NM_133509 RAD51B 0 . . . 8.59 91.28 28 4.06 No 21 1.08 Yes 0 0 No -22 0.41 No 37 66.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68617981 + NM_133509 RAD51B 0 . . . 7.83 79.22 24 5.76 Yes 9 1.06 Yes 0 0 No -23 0.66 No 38 59.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152369448 - NM_005431 XRCC2 0 . . . 0.95 72.2 27 4.53 No 28 0.44 No 0 0 No -22 0.47 No 53 77.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90948203 - NM_002485 NBN 0 . . . 1.11 70.05 11 5.66 Yes 50 0.37 No 0 0 No -25 0.77 Yes 46 36.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69107829 + NM_133509 RAD51B 0 . . . 2.98 71.35 31 5.42 No 35 0.86 Yes 0 0 No -31 0.56 No 39 68.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90972735 - NM_002485 NBN 0 . . . 0.58 68.4 103 7.32 Yes 76 0.75 No 0 0 No -30 0.71 Yes 48 79.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59836316 - NM_032043 BRIP1 0 . . . 0.22 67.67 33 4.3 No 38 0.53 No 0 0 No -51 0.38 No 17 71.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41007001 + NM_001164269 RAD51 0 . . . 5.9 80.14 10 4 No 48 0.9 Yes 0 0 No -37 0.34 No 48 84.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59863029 - NM_032043 BRIP1 0 . . . 9.59 92.58 29 5.48 No 40 0.57 No 0 0 No -28 0.91 Yes 45 69.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94160701 - NM_005591 MRE11 0 . . . 6.18 75.28 15 5.2 No 47 1.15 Yes 0 0 No -20 0.75 Yes 29 73.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847093 + NM_133509 RAD51B 0 . . . 1.97 69.24 31 5.48 No 7 0.36 No 0 0 No -30 0.37 No 47 66.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68789902 + NM_004360 CDH1 0 . . . 7.68 74.94 32 4.76 No 27 -0.29 No 0 0 No -28 0.27 No 55 57.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89645079 + NM_000314 PTEN 0 . . . 4.04 76.21 15 4.94 No 6 0.63 No 0 0 No -32 0.38 No 45 64.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68639553 + NM_133509 RAD51B 0 . . . 2.06 54.86 28 5.44 No 58 1.2 Yes 0 0 No -27 0.87 Yes 48 51.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68759776 + NM_133509 RAD51B 0 . . . 3.69 75.47 56 6.54 Yes 5 1.04 Yes 0 0 No -38 0.73 Yes 21 67.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47767388 + NM_000251 MSH2 0 . . . 0.35 0 14 5 No 45 -2.1 No 0 0 No -26 0.7 Yes 56 31.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41212463 - NM_007294 BRCA1 0 . . . 0.37 0 26 6.99 Yes 76 0.48 No 0 0 No -31 0.43 No 46 87.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152342067 - NM_005431 XRCC2 0 . . . 4.33 86.23 25 5.2 No 58 -1.73 No 0 0 No -24 0.84 Yes 46 45.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47665899 + NM_000251 MSH2 0 . . . 4.67 81.95 25 7.4 Yes 5 0.45 No 0 0 No -25 0.7 Yes 43 68.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190742609 + NM_000534 PMS1 0 . . . 7.65 75.28 23 4.89 No 63 -3.39 No 0 0 No -22 0.71 Yes 58 25.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47643447 + NM_000251 MSH2 0 . . . 3.35 71.2 25 5.59 Yes 42 1.77 Yes 0 0 No -33 0.34 No 16 85.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68419837 + NM_133509 RAD51B 0 . . . 2.85 68.64 19 4.58 No 38 -2.9 No 0 0 No -18 0.93 Yes 45 33.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131938098 + NM_005732 RAD50 0 . . . 6.31 88.91 29 5.53 No 32 0.59 No 0 0 No -25 0.37 No 42 37.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68739447 + NM_133509 RAD51B 0 . . . 5.68 89.33 32 5.74 Yes 14 -0.34 No 0 0 No -31 0.75 Yes 10 3.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68427745 + NM_133509 RAD51B 0 . . . 3.69 80.53 18 5.2 No 34 1.28 Yes 0 0 No -17 0.42 No 47 89.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190726151 + NM_000534 PMS1 0 . . . 5.87 73.9 38 6.57 Yes 63 1.24 Yes 0 0 No -37 0.88 Yes 39 76.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68759840 + NM_133509 RAD51B 0 . . . 0.51 0 17 4.8 No 69 1.08 Yes 0 0 No -16 0.39 No 42 52.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68713336 + NM_133509 RAD51B 0 . . . 2.05 64.46 28 4.71 No 55 0.46 No 0 0 No -22 0.5 No 50 73.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69057079 + NM_133509 RAD51B 0 . . . 2.29 88.53 31 5.83 Yes 74 -4.22 No 0 0 No -30 0.87 Yes 62 22.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68810004 + NM_004360 CDH1 0 . . . 2.74 84.08 35 6.07 Yes 39 0.69 No 0 0 No -34 0.55 No 50 60.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90946100 - NM_002485 NBN 0 . . . 1.18 68.41 11 5 No 43 1.12 Yes 0 0 No -47 0.72 Yes 49 40.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190655042 + NM_000534 PMS1 0 . . . 3.81 70.43 18 4.63 No 12 1.26 Yes 0 0 No -21 0.56 No 46 90.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215654009 - NM_000465 BARD1 0 . . . 2.24 68.34 53 8.93 Yes 30 1.18 Yes 0 0 No -52 0.78 Yes 40 83.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68488171 + NM_133509 RAD51B 0 . . . 6.32 88.47 13 5 No 71 0.86 Yes 0 0 No -26 0.39 No 44 86.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68883665 + NM_133509 RAD51B 0 . . . 6.55 78.56 23 6.4 Yes 13 1.09 Yes 0 0 No -31 0.68 Yes 44 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108167668 + NM_000051 ATM 0 . . . 2.56 64.43 29 5.75 Yes -4 0.39 No 26 0.62 Yes -30 0.52 No 55 54.77 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68809745 + NM_133509 RAD51B 0 . . . 1.79 67.55 52 7.92 Yes 68 0.19 No 0 0 No -51 0.39 No 41 77.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68639951 + NM_133509 RAD51B 0 . . . 1.89 70.28 14 4.55 No 26 0.72 No 0 0 No -23 0.75 Yes 32 96.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215625406 - NM_000465 BARD1 0 . . . 1.06 71.87 28 6.59 Yes 45 1.24 Yes 0 0 No -27 0.51 No 43 75.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59842019 - NM_032043 BRIP1 0 . . . 0.46 62.3 21 5.57 Yes 17 0.13 No 0 0 No -20 0.73 Yes 17 48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90995289 - NM_002485 NBN 0 . . . 2.36 59.18 21 5.15 No 57 1.6 Yes 0 0 No -20 0.44 No 26 68.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47727253 + NM_000251 MSH2 0 . . . 1.71 67.57 12 5.66 Yes 16 0.28 No 0 0 No -25 0.76 Yes 42 43.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56804738 + NM_058216 RAD51C 0 . . . 1.24 78.12 28 5.66 Yes 3 1.45 Yes 0 0 No -27 0.72 Yes 50 60.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108191759 + NM_000051 ATM 0 . . . 3.13 75.49 28 5.48 No 14 0.45 No 0 0 No -27 0.5 No 44 75.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152369327 - NM_005431 XRCC2 0 . . . 7.43 85.47 65 7.53 Yes 27 1.68 Yes 0 0 No -35 0.88 Yes 37 96.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68860596 + NM_004360 CDH1 0 . . . 3.17 0 28 5.82 Yes 48 0.94 Yes 0 0 No -30 0.52 No 46 80.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68599229 + NM_133509 RAD51B 0 . . . 2.77 81.37 33 6 Yes 60 -4.47 No 0 0 No -31 0.46 No 44 54.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190653162 + NM_000534 PMS1 0 . . . 4.82 67.39 21 4.29 No 51 0.78 Yes 0 0 No -20 0.55 No 43 70.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59803252 - NM_032043 BRIP1 0 . . . 6.51 82.99 20 4.74 No 5 0.97 Yes 0 0 No -19 0.42 No 53 72.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59792002 - NM_032043 BRIP1 0 . . . 3.04 85.66 21 4.5 No 52 0.78 Yes 0 0 No -25 0.53 No 45 96.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47769802 + NM_000251 MSH2 0 . . . 6.15 91.77 18 5.91 Yes 17 0.15 No 0 0 No -22 0.51 No 48 93.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68413611 + NM_133509 RAD51B 0 . . . 3.96 74.16 24 5.19 No 60 0.55 No 0 0 No -23 0.74 Yes 41 50.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68800440 + NM_133509 RAD51B 0 . . . 3.13 68.89 26 5.64 Yes 15 0.41 No 0 0 No -30 0.8 Yes 51 47.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190739522 + NM_000534 PMS1 0 . . . 3.01 67.48 25 5.55 No 50 1.26 Yes 0 0 No -21 0.55 No 29 38.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68896750 + NM_133509 RAD51B 0 . . . 6.66 89.2 16 5.12 No -2 0.33 No 0 0 No -25 0.57 No 33 77.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68983702 + NM_133509 RAD51B 0 . . . 4.53 79.73 21 6.78 Yes 48 1.38 Yes 0 0 No -20 0.96 Yes 44 46.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32922613 + NM_000059 BRCA2 0 . . . 1.55 67.78 46 6.63 Yes 67 0.19 No 0 0 No -29 0.85 Yes 50 81.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21978042 - NM_000077 CDKN2A 0 . . . 3.82 83.41 20 4.95 No 46 0.42 No 0 0 No -19 0.18 No 52 46.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68932629 + NM_133509 RAD51B 0 . . . 1.27 76.63 25 7.98 Yes 67 -4.97 No 0 0 No -37 0.73 Yes 43 76.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68587735 + NM_133509 RAD51B 0 . . . 4.8 70.36 15 4.58 No 1 0.88 Yes 0 0 No -19 0.71 Yes 47 84.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59884320 - NM_032043 BRIP1 0 . . . 0.42 74.68 16 4.69 No 44 0 No 0 0 No -21 0.45 No 47 83.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23631985 - NM_024675 PALB2 0 . . . 2.38 80.34 14 5.3 No 9 0.59 No 0 0 No -24 0.74 Yes 49 57.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89706399 + NM_000314 PTEN 0 . . . 1.43 0 27 5.48 No 69 -3.76 No 0 0 No -29 0.28 No 30 74.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68673231 + NM_133509 RAD51B 0 . . . 0.97 83.6 18 3.68 No 38 1.1 Yes 0 0 No -21 0.63 No 44 41.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190704874 + NM_000534 PMS1 0 . . . 1.22 70.19 30 5.44 No 22 -3.3 No 0 0 No -29 0.79 Yes 50 56.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56789759 + NM_058216 RAD51C 0 . . . 2.97 76.03 20 7.14 Yes 42 -2.25 No 0 0 No -19 0.76 Yes 46 54.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1219589 + NM_000455 STK11 0 . . . 2.86 84 13 4.52 No 2 1.5 Yes 0 0 No -42 0.41 No 56 22.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40996390 + NM_001164269 RAD51 0 . . . 1.08 84.22 22 4.39 No 33 1.34 Yes 0 0 No -21 0.54 No 25 68.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41194873 - NM_007294 BRCA1 0 . . . 3.09 68.39 47 8.18 Yes 12 2.09 Yes 0 0 No -20 0.46 No 46 80.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6026039 - NM_000535 PMS2 0 . . . 1.3 73.08 16 5.2 No 61 0.75 No 0 0 No -20 0.32 No 51 51.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104180258 - NM_001100119 XRCC3 0 . . . 0.07 0 29 4.89 No 61 -1.98 No 0 0 No -28 0.76 Yes 49 50.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94189814 - NM_005591 MRE11 0 . . . 7.14 77.87 18 5.55 No 47 -1.88 No 0 0 No -24 0.43 No 44 83.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89671132 + NM_000314 PTEN 0 . . . 1.41 67.72 32 6.08 Yes 14 0.88 Yes 0 0 No -40 0.37 No 44 60.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32936530 + NM_000059 BRCA2 0 . . . 7.63 69.92 45 6.78 Yes 56 0.43 No 0 0 No -44 0.56 No 38 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68604737 + NM_133509 RAD51B 0 . . . 3.9 0 14 4.59 No 27 -1.71 No 0 0 No -25 0.39 No 43 76.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68516318 + NM_133509 RAD51B 0 . . . 10.85 82.91 14 4.79 No 52 1.74 Yes 0 0 No -22 0.58 No 49 80.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152369599 - NM_005431 XRCC2 0 . . . 3.86 72 18 4.61 No 16 0.53 No 0 0 No -17 0.74 Yes 42 76.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68655546 + NM_133509 RAD51B 0 . . . 4.72 71.85 13 4.97 No 60 1.03 Yes 0 0 No -18 0.73 Yes 44 69.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104177021 - NM_001100119 XRCC3 0 . . . 0.42 0 13 4.04 No 70 0.01 No 0 0 No -17 0.46 No 49 25.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68454775 + NM_133509 RAD51B 0 . . . 1.26 65.74 33 6.55 Yes 71 -4.85 No 0 0 No -32 0.58 No 55 22.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68693977 + NM_133509 RAD51B 0 . . . 14.01 94.97 30 5.31 No 66 0.54 No 0 0 No -29 0.29 No 40 79.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37062720 + NM_000249 MLH1 0 . . . 2.47 65.15 20 4.9 No 73 -2.95 No 0 0 No -22 0.36 No 36 40.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108198994 + NM_000051 ATM 0 . . . 4.4 83.2 69 6.74 Yes 24 0.86 Yes 0 0 No -31 0.53 No 39 88.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59834767 - NM_032043 BRIP1 0 . . . 8.62 86.68 19 4.69 No 1 0.79 Yes 0 0 No -18 0.78 Yes 46 84.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69028618 + NM_133509 RAD51B 0 . . . 3.34 0 19 6.75 Yes 68 -2.3 No 0 0 No -30 0.62 No 53 46.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68785772 + NM_133509 RAD51B 0 . . . 6.12 76.9 29 4.69 No 76 0.6 No 0 0 No -21 0.66 Yes 52 67.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7565730 - NM_000546 TP53 0 . . . 4.21 64.63 20 4.69 No 71 -5.1 No 0 0 No -48 0.39 No 51 39.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68537248 + NM_133509 RAD51B 0 . . . 3.23 76.81 14 6 Yes 73 -4.18 No 0 0 No -32 0.92 Yes 39 74.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6038428 - NM_000535 PMS2 0 . . . 2.03 75.25 11 5.1 No 34 1.18 Yes 0 0 No -27 0.54 No 24 57.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59924677 - NM_032043 BRIP1 0 . . . 5.74 94.69 33 5.74 Yes 61 0.71 No 0 0 No -27 0.7 Yes 14 45.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68867063 + NM_133509 RAD51B 0 . . . 5.74 80.36 9 3.87 No 24 0.53 No 0 0 No -22 0.52 No 45 64.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68706554 + NM_133509 RAD51B 0 . . . 0.46 71.02 35 5.56 Yes 8 1.25 Yes 0 0 No -34 0.64 No 50 95.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89623399 + NM_000314 PTEN 0 . . . 3.87 73.26 25 5.39 No 7 1.15 Yes 0 0 No -22 0.74 Yes 51 71.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68828154 + NM_004360 CDH1 0 . . . 4.85 74.42 15 3.73 No 41 1.02 Yes 0 0 No -28 0.7 Yes 40 48.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68484659 + NM_133509 RAD51B 0 . . . 3.67 79.94 34 7.62 Yes 58 -3.48 No 0 0 No -33 0.73 Yes 48 81.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108202978 + NM_000051 ATM 0 . . . 0.58 67.33 20 5.74 Yes -2 1.29 Yes 0 0 No -19 0.91 Yes 45 40.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68809414 + NM_004360 CDH1 0 . . . 5.55 78.02 12 4.9 No 27 -1.25 No 0 0 No -24 0.48 No 52 31.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68989109 + NM_133509 RAD51B 0 . . . 3.74 85.51 38 6.63 Yes 67 0.15 No 0 0 No -37 0.54 No 52 54.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69103841 + NM_133509 RAD51B 0 . . . 4.39 82.47 22 4.98 No 30 0.58 No 0 0 No -21 0.94 Yes 27 58.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94201886 - NM_005591 MRE11 0 . . . 0.97 61.18 19 5 No 69 0.04 No 0 0 No -23 0.48 No 47 44.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215673196 - NM_000465 BARD1 0 . . . 9.68 90.72 20 5.49 No -4 0.95 Yes 0 0 No -19 0.59 No 26 77.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47790431 + NM_000251 MSH2 0 . . . 1.28 68.92 14 4.47 No 74 1.32 Yes 0 0 No -23 0.49 No 49 30.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59886853 - NM_032043 BRIP1 0 . . . 3.77 78.53 21 5.54 No 12 0.78 Yes 0 0 No -20 0.43 No 46 72.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32918505 + NM_000059 BRCA2 0 . . . 0.73 0 30 5.59 Yes 4 -2.35 No 0 0 No -29 0.51 No 40 49.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108127597 + NM_000051 ATM 0 . . . 4.47 69.24 23 4.77 No 10 1.02 Yes 0 0 No -22 0.86 Yes 48 89.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68972505 + NM_133509 RAD51B 0 . . . 5.49 79.91 16 5.26 No 44 -3.86 No 0 0 No -39 0.37 No 15 61.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108117952 + NM_000051 ATM 0 . . . 5.07 64.69 20 5.65 Yes 44 0.78 Yes 0 0 No -19 0.38 No 26 49.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68800535 + NM_133509 RAD51B 0 . . . 4.01 77.16 16 4.68 No 13 0.81 Yes 0 0 No -48 0.91 Yes 47 59.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68672601 + NM_133509 RAD51B 0 . . . 1.57 70.27 19 4.58 No 59 0.45 No 0 0 No -18 0.92 Yes 60 40.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94203242 - NM_005591 MRE11 0 . . . 4.86 70.42 38 7.14 Yes 75 -5.03 No 0 0 No -37 0.73 Yes 48 91.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69114767 + NM_133509 RAD51B 0 . . . 2.42 61.82 22 5.18 No 56 1.02 Yes 0 0 No -22 0.76 Yes 32 36.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68926586 + NM_133509 RAD51B 0 . . . 10.61 94.94 11 5.74 Yes 6 0.66 No 0 0 No -26 0.61 No 52 57.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131975682 + NM_005732 RAD50 0 . . . 0.34 0 21 5.2 No 69 1.15 Yes 0 0 No -20 0.81 Yes 39 72.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190680654 + NM_000534 PMS1 0 . . . 1.81 0 24 4.59 No 32 1.05 Yes 0 0 No -21 0.66 No 37 75.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37055127 + NM_000249 MLH1 0 . . . 3.98 77.87 16 4.54 No 2 0.98 Yes 0 0 No -58 0.23 No 41 45.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68620771 + NM_133509 RAD51B 0 . . . 1 0 18 4.59 No 7 1.69 Yes 0 0 No -27 0.71 Yes 51 91.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152367531 - NM_005431 XRCC2 0 . . . 3.17 61.87 15 5.47 No 46 1.22 Yes 0 0 No -21 0.48 No 39 43.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37079251 + NM_000249 MLH1 0 . . . 1.93 84.08 29 6.2 Yes 3 1.28 Yes 0 0 No -25 0.63 No 50 41.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41243420 - NM_007294 BRCA1 0 . . . 6.71 82.53 27 6.86 Yes 50 -3.14 No 0 0 No -26 0.77 Yes 45 80.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47800494 + NM_000251 MSH2 0 . . . 3.05 66.49 22 7.28 Yes 23 0.62 No 0 0 No -30 0.57 No 49 57.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89647275 + NM_000314 PTEN 0 . . . 1.76 68.99 32 5.71 Yes 73 -5.48 No 0 0 No -26 0.61 No 53 25.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47794742 + NM_000251 MSH2 0 . . . 1.26 77.33 24 5.83 Yes 8 0.78 Yes 0 0 No -23 0.77 Yes 50 68.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47667627 + NM_000251 MSH2 0 . . . 5.45 80.12 41 6.68 Yes 7 1.14 Yes 0 0 No -40 0.75 Yes 51 63.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47716203 + NM_000251 MSH2 0 . . . 1.77 77.22 33 5.64 Yes -4 0.18 No 0 0 No -32 0.65 No 17 43.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75513208 - NM_001040108 MLH3 0 . . . 1.61 70.78 33 6.02 Yes 60 0.34 No 0 0 No -23 0.51 No 52 53.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68541018 + NM_133509 RAD51B 0 . . . 3.9 87.49 25 5.08 No 3 0.86 Yes 0 0 No -24 0.62 No 48 88.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59861390 - NM_032043 BRIP1 0 . . . 1.04 75.73 28 6.24 Yes 50 1.74 Yes 0 0 No -27 0.52 No 48 73.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59924700 - NM_032043 BRIP1 0 . . . 6.23 78.53 30 5.8 Yes 38 0.72 No 0 0 No -29 0.9 Yes 37 66.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68829261 + NM_004360 CDH1 0 . . . 7.44 84.59 37 6.78 Yes 67 0.73 No 0 0 No -36 0.67 Yes 42 64.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47746663 + NM_000251 MSH2 0 . . . 8.6 82.97 31 4.16 No 62 0.03 No 0 0 No -27 0.47 No 45 43.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41258943 - NM_007294 BRCA1 0 . . . 5.31 75.77 23 5.1 No 38 0.91 Yes 0 0 No -23 0.53 No 38 73.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108170328 + NM_000051 ATM 0 . . . 6.09 73.69 27 5.04 No 64 1.6 Yes 0 0 No -26 0.45 No 48 51.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68529726 + NM_133509 RAD51B 0 . . . 7.62 85.58 31 4.74 No 59 1.24 Yes 0 0 No -22 0.41 No 47 55.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195854 + NM_000051 ATM 0 . . . 0.08 69.75 22 4.69 No 28 1.63 Yes 0 0 No -21 0.95 Yes 42 32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131906574 + NM_005732 RAD50 0 . . . 3.52 76.43 39 5.27 No 32 1.82 Yes 0 0 No -32 0.66 No 50 66.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41278336 - NM_007294 BRCA1 0 . . . 0.17 72.24 26 6 Yes 19 1.23 Yes 0 0 No -23 0.7 Yes 38 69.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108193691 + NM_000051 ATM 0 . . . 4.84 83.2 58 7.55 Yes 7 0.13 No 0 0 No -23 0.68 Yes 45 69.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68852023 + NM_004360 CDH1 0 . . . 2.8 65.56 21 5.66 Yes 56 0.99 Yes 0 0 No -20 0.85 Yes 42 54.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56784085 + NM_058216 RAD51C 0 . . . 3.6 70.05 18 4.69 No 12 0.87 Yes 0 0 No -17 0.64 No 46 92.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47694475 + NM_000251 MSH2 0 . . . 3.25 80.12 32 5.74 Yes 75 1.16 Yes 0 0 No -53 0.54 No 50 89.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68373969 + NM_133509 RAD51B 0 . . . 1.94 0 20 4.43 No 21 1.02 Yes 0 0 No -20 0.64 No 47 53.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29090049 - NM_001005735 CHEK2 0 . . . 0.06 78.89 27 6.16 Yes 67 0.03 No 0 0 No -26 0.77 Yes 51 29.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68408414 + NM_133509 RAD51B 0 . . . 4.19 86.65 16 5.06 No 33 1.84 Yes 0 0 No -44 0.7 Yes 47 87.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68588691 + NM_133509 RAD51B 0 . . . 0.73 69.59 40 6.24 Yes 76 -4.51 No 0 0 No -39 0.77 Yes 48 51.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29087900 - NM_001005735 CHEK2 0 . . . 0.71 63.6 42 6.78 Yes 19 0.11 No 0 0 No -39 0.85 Yes 39 88.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69056321 + NM_133509 RAD51B 0 . . . 4.15 83.03 35 6.07 Yes 31 0.38 No 0 0 No -34 0.68 Yes 35 66.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68998566 + NM_133509 RAD51B 0 . . . 0.53 51.47 48 6.78 Yes 54 -2.67 No 0 0 No -29 0.58 No 51 37.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190714436 + NM_000534 PMS1 0 . . . 3.11 78.37 21 5 No 18 0.25 No 0 0 No -20 0.65 No 44 90.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89731142 + NM_000314 PTEN 0 . . . 4.08 71.14 49 7.2 Yes 68 -2.41 No 0 0 No -36 0.47 No 46 92.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69118566 + NM_133509 RAD51B 0 . . . 3.38 73.11 23 4.84 No 1 1.42 Yes 0 0 No -22 0.67 Yes 45 95.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68999450 + NM_133509 RAD51B 0 . . . 3.89 77.67 17 6.72 Yes 2 1.22 Yes 0 0 No -21 0.48 No 56 49.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89646056 + NM_000314 PTEN 0 . . . 1.87 74.94 24 5.19 No 69 2.27 Yes 0 0 No -23 0.8 Yes 36 73.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68594524 + NM_133509 RAD51B 0 . . . 3.88 83.35 37 6.16 Yes 35 1.04 Yes 0 0 No -31 0.45 No 41 60.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68967253 + NM_133509 RAD51B 0 . . . 3.55 72.5 15 5.57 Yes 6 0.68 No 0 0 No -26 0.78 Yes 48 77.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41227942 - NM_007294 BRCA1 0 . . . 3.17 80.12 26 5.29 No 8 1.07 Yes 0 0 No -25 0.85 Yes 50 68.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68769764 + NM_133509 RAD51B 0 . . . 3.74 72.78 28 6.01 Yes -1 0.43 No 0 0 No -27 0.34 No 39 61.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68388684 + NM_133509 RAD51B 0 . . . 7.66 81.26 24 5.29 No -4 0.9 Yes 0 0 No -23 0.89 Yes 42 77.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105197417 + NM_021930 RINT1 0 . . . 0.46 0 21 4.58 No 48 -3.14 No 0 0 No -20 0.87 Yes 54 68.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69108817 + NM_133509 RAD51B 0 . . . 8.25 86.07 24 5 No 14 1.02 Yes 0 0 No -23 0.89 Yes 41 90.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108111113 + NM_000051 ATM 0 . . . 2.14 0 19 5 No 66 1.32 Yes 0 0 No -53 0.79 Yes 30 58.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47714846 + NM_000251 MSH2 0 . . . 0.05 69.91 16 5.68 Yes 19 -2.06 No 0 0 No -39 0.27 No 52 20.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56785636 + NM_058216 RAD51C 0 . . . 4.02 72.65 13 3.93 No 13 1.46 Yes 0 0 No -48 0.87 Yes 45 76.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190688030 + NM_000534 PMS1 0 . . . 8.34 90.56 22 6.93 Yes 20 0.45 No 0 0 No -21 0.65 No 42 51.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108146929 + NM_000051 ATM 0 . . . 9.56 84.53 19 4.74 No 67 1.49 Yes 0 0 No -39 0.35 No 43 97.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41215556 - NM_007294 BRCA1 0 . . . 2.53 80.12 31 5.82 Yes 67 -4.76 No 0 0 No -23 0.45 No 47 43.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94226320 - NM_005591 MRE11 0 . . . 0.12 73.76 16 5.04 No 32 1.6 Yes 0 0 No -20 0.77 Yes 43 71.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6038454 - NM_000535 PMS2 0 . . . 3.59 78.03 15 5.19 No 8 1.19 Yes 0 0 No -20 0.33 No 50 85.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68813831 + NM_004360 CDH1 0 . . . 7.55 76.23 56 6.36 Yes 44 -1.41 No 0 0 No -21 0.33 No 36 61.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59939928 - NM_032043 BRIP1 0 . . . 1.69 73.4 44 6.93 Yes 33 -1.94 No 0 0 No -31 0.83 Yes 53 63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68387435 + NM_133509 RAD51B 0 . . . 5.76 78.32 16 5.07 No 66 -4.36 No 0 0 No -20 0.65 No 47 62.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59826923 - NM_032043 BRIP1 0 . . . 5.61 72.95 14 5.15 No 32 1.47 Yes 0 0 No -56 0.48 No 26 91.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131977552 + NM_005732 RAD50 0 . . . 0.45 72.57 14 5.1 No 45 -4.54 No 0 0 No -17 0.35 No 47 27.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69046808 + NM_133509 RAD51B 0 . . . 1.3 0 40 5.2 No 12 0.07 No 0 0 No -42 0.5 No 43 47.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90952203 - NM_002485 NBN 0 . . . 3.85 79.99 22 4.72 No 68 1.53 Yes 0 0 No -21 0.81 Yes 48 85.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75510493 - NM_001040108 MLH3 0 . . . 2.65 83.87 17 4.8 No 67 0.74 No 0 0 No -19 0.41 No 48 83.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32920148 + NM_000059 BRCA2 0 . . . 4.14 68.88 21 4.53 No 71 -6.39 No 0 0 No -26 0.59 No 29 74.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37092202 + NM_000249 MLH1 0 . . . 0.82 62.37 28 5.18 No 38 -1.18 No 0 0 No -18 0.47 No 24 92.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59933009 - NM_032043 BRIP1 0 . . . 2.6 76.97 16 5.39 No 16 0.3 No 0 0 No -26 0.64 No 48 52.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47746713 + NM_000251 MSH2 0 . . . 2.56 0 42 6.66 Yes 20 0.16 No 0 0 No -30 0.47 No 38 36.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47632210 + NM_000251 MSH2 0 . . . 1.84 77.71 53 5.06 No 8 1.49 Yes 0 0 No -24 0.36 No 50 65.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6048299 - NM_000535 PMS2 0 . . . 2.25 68.38 80 8.28 Yes 30 -2.6 No 0 0 No -26 0.51 No 45 35.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47780148 + NM_000251 MSH2 0 . . . 2.84 73 17 6.76 Yes 33 1.65 Yes 0 0 No -28 0.7 Yes 25 89.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69134930 + NM_133509 RAD51B 0 . . . 0.27 77.33 17 5.82 Yes 73 1.14 Yes 0 0 No -16 0.22 No 26 64.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47656045 + NM_000251 MSH2 0 . . . 2.77 71.34 19 6.31 Yes 1 0.74 No 0 0 No -29 0.5 No 45 60.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89633180 + NM_000314 PTEN 0 . . . 0.98 0 24 5.79 Yes 72 1.46 Yes 0 0 No -23 0.56 No 43 63.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59899914 - NM_032043 BRIP1 0 . . . 6.9 89.06 22 4.8 No 54 1.04 Yes 0 0 No -21 0.95 Yes 48 63.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89660601 + NM_000314 PTEN 0 . . . 4.36 72.27 16 4.48 No 46 0.87 Yes 0 0 No -45 0.56 No 42 60.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68767665 + NM_133509 RAD51B 0 . . . 3.74 74.39 15 4.3 No 65 -3.58 No 0 0 No -32 0.79 Yes 46 83.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21987913 - NM_000077 CDKN2A 0 . . . 4.26 73.66 29 5.74 Yes 69 -2.33 No 0 0 No -28 0.88 Yes 46 85.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68868897 + NM_004360 CDH1 0 . . . 2.04 70.16 19 5 No 9 0.58 No 0 0 No -27 0.51 No 49 84.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94207262 - NM_005591 MRE11 0 . . . 4.16 86.97 38 7.61 Yes 56 1.44 Yes 0 0 No -37 0.51 No 49 58.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108168754 + NM_000051 ATM 0 . . . 5.53 82.35 21 4.9 No 10 0.89 Yes 0 0 No -20 0.79 Yes 48 84.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68905939 + NM_133509 RAD51B 0 . . . 8.14 85.19 30 5.11 No 17 1.32 Yes 0 0 No -29 0.79 Yes 41 96.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131966544 + NM_005732 RAD50 0 . . . 6.51 71.77 50 7 Yes 13 1.32 Yes 0 0 No -33 0.69 Yes 45 94.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45793562 - NM_001048171 MUTYH 0 . . . 4.3 77.84 32 7.38 Yes 39 -2.57 No 0 0 No -31 0.84 Yes 44 74.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69061130 + NM_133509 RAD51B 0 . . . 7.94 88.23 20 5.1 No 3 0.95 Yes 0 0 No -19 0.56 No 44 75.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47653057 + NM_000251 MSH2 0 . . . 2.86 69.32 24 4.74 No -4 0.89 Yes 0 0 No -23 0.47 No 43 71.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190658491 + NM_000534 PMS1 0 . . . 2.13 75.94 25 5.39 No 14 0.52 No 0 0 No -24 0.59 No 43 75.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59826728 - NM_032043 BRIP1 0 . . . 3.1 78.12 9 3.87 No 0 1.62 Yes 0 0 No -44 0.93 Yes 40 51.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29116716 - NM_001005735 CHEK2 0 . . . 0.84 65.34 15 4.86 No 59 -2.62 No 0 0 No -26 0.65 No 48 65.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75500795 - NM_001040108 MLH3 0 . . . 1.08 84.22 35 5.97 Yes 75 1.45 Yes 0 0 No -22 0.49 No 25 44.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59889426 - NM_032043 BRIP1 0 . . . 5.96 87.67 22 5.58 Yes 56 0.99 Yes 0 0 No -38 0.56 No 44 60.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90978572 - NM_002485 NBN 0 . . . 1.08 0 21 4.58 No 67 0.82 Yes 0 0 No -20 0.8 Yes 50 62.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108138337 + NM_000051 ATM 0 . . . 1.43 77.71 40 6.56 Yes 4 0.41 No 0 0 No -39 0.56 No 54 87.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68627725 + NM_133509 RAD51B 0 . . . 7.41 84.8 23 4.44 No 13 0.17 No 0 0 No -22 0.63 No 45 80.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69097095 + NM_133509 RAD51B 0 . . . 8.79 75.82 17 5.38 No 68 2.27 Yes 0 0 No -27 0.79 Yes 46 66.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68398711 + NM_133509 RAD51B 0 . . . 10.06 78.93 29 5.92 Yes 12 1.21 Yes 0 0 No -28 0.63 No 46 57.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32914788 + NM_000059 BRCA2 0 . . . 2.89 72.15 33 6.08 Yes 0 1.13 Yes 0 0 No -32 0.9 Yes 39 56.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32955164 + NM_000059 BRCA2 0 . . . 2.54 0 19 4.68 No 20 0.26 No 0 0 No -18 0.62 No 30 76.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75490597 - NM_001040108 MLH3 0 . . . 7.6 78.18 22 5.66 Yes 5 0.98 Yes 0 0 No -21 0.68 Yes 42 48.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29110530 - NM_001005735 CHEK2 0 . . . 1.75 71.45 10 4 No 48 -3.4 No 0 0 No -24 0.81 Yes 30 31.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215659840 - NM_000465 BARD1 0 . . . 6.19 87.45 12 5.2 No 39 1.14 Yes 0 0 No -45 0.41 No 45 62.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47770150 + NM_000251 MSH2 0 . . . 0.53 70.25 14 3.8 No 49 1.37 Yes 0 0 No -21 0.36 No 44 88.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108201246 + NM_000051 ATM 0 . . . 5.86 80.68 39 6.53 Yes 73 0.75 No 0 0 No -24 0.72 Yes 39 77.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215650283 - NM_000465 BARD1 0 . . . 4.3 0 13 5 No 51 1.02 Yes 0 0 No -12 0.48 No 46 71.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68789450 + NM_004360 CDH1 0 . . . 2.35 77.18 16 4.65 No 61 0.62 No 0 0 No -24 0.87 Yes 51 63.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68537549 + NM_133509 RAD51B 0 . . . 1.75 68.11 19 4.18 No 62 0.22 No 0 0 No -23 0.92 Yes 45 84.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190716610 + NM_000534 PMS1 0 . . . 8.12 83.59 24 6.16 Yes 1 0.1 No 0 0 No -24 0.68 Yes 41 65.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94224725 - NM_005591 MRE11 0 . . . 3.7 59.03 23 4.59 No 54 1.95 Yes 0 0 No -22 0.68 Yes 43 45.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108141030 + NM_000051 ATM 0 . . . 4.41 64.8 32 4.49 No 37 1.09 Yes 0 0 No -26 0.45 No 36 67.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108217909 + NM_000051 ATM 0 . . . 0.3 68.29 21 5.02 No 0 0.22 No 0 0 No -20 0.58 No 49 20.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68624269 + NM_133509 RAD51B 0 . . . 4.31 87.01 52 8.11 Yes 10 0.5 No 0 0 No -41 0.76 Yes 48 93.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59767336 - NM_032043 BRIP1 0 . . . 1.22 0 21 7.21 Yes 38 0.45 No 0 0 No -20 0.67 Yes 20 79.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68809684 + NM_004360 CDH1 0 . . . 0.38 74.13 15 5.08 No 39 0.52 No 0 0 No -23 0.75 Yes 50 37.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47670069 + NM_000251 MSH2 0 . . . 6.83 72.91 15 4.4 No 59 0.87 Yes 0 0 No -32 0.96 Yes 46 67.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33428512 - NM_002878 RAD51D 0 . . . 0.25 0 22 5.64 Yes 69 -3.58 No 0 0 No -21 0.93 Yes 50 63.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108165631 + NM_000051 ATM 0 . . . 0.43 61.02 15 5.2 No 43 1.14 Yes 26 0.73 Yes -26 0.72 Yes 11 55.33 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 69080289 + NM_133509 RAD51B 0 . . . 5.4 84.22 30 6 Yes 76 1.48 Yes 0 0 No -29 0.57 No 50 92.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68857814 + NM_133509 RAD51B 0 . . . 4.33 88.47 14 3.98 No 68 0.37 No 0 0 No -22 0.74 Yes 51 96.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89682450 + NM_000314 PTEN 0 . . . 8.22 88.83 14 3.92 No 33 0.93 Yes 0 0 No -29 0.47 No 46 49.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41018633 + NM_001164269 RAD51 0 . . . 3.58 80.59 31 6 Yes 6 1.08 Yes 0 0 No -30 0.81 Yes 52 54.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48008165 + NM_000179 MSH6 0 . . . 0.29 0 24 5.05 No 76 -2.1 No 0 0 No -23 0.85 Yes 47 48.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152346293 - NM_005431 XRCC2 0 . . . 3.43 67.51 12 2.98 No 21 0.53 No 0 0 No -27 0.36 No 37 54.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41005260 + NM_001164269 RAD51 0 . . . 3.6 85.02 22 4.58 No 4 1.05 Yes 0 0 No -36 0.92 Yes 49 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41231458 - NM_007294 BRCA1 0 . . . 4.04 85.85 29 5.74 Yes 17 0.97 Yes 27 0.66 Yes -26 0.52 No 41 86.93 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: No, RNABPS: Yes chr2 190648000 + NM_000534 PMS1 0 . . . 6.96 79.88 33 5.07 No 43 0.78 Yes 0 0 No -28 0.62 No 44 92.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59809781 - NM_032043 BRIP1 0 . . . 4.06 71.51 15 4.3 No 47 1.11 Yes 0 0 No -24 0.68 Yes 43 40.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152357446 - NM_005431 XRCC2 0 . . . 0.9 67.95 18 4.87 No 50 0.51 No 0 0 No -20 0.63 No 41 51.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190742502 + NM_000534 PMS1 0 . . . 2.97 70.71 19 4.96 No -4 0.49 No 0 0 No -22 0.66 No 43 55.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68555842 + NM_133509 RAD51B 0 . . . 5.72 70.61 14 4.29 No 16 1.63 Yes 0 0 No -28 0.47 No 46 60.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47727133 + NM_000251 MSH2 0 . . . 3.62 74 25 5.29 No 48 1.65 Yes 0 0 No -24 0.44 No 34 66.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75511226 - NM_001040108 MLH3 0 . . . 4.33 72.57 39 7.72 Yes 1 0.62 No 0 0 No -29 0.37 No 23 54.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215623969 - NM_000465 BARD1 0 . . . 5.7 78.53 18 4.9 No 63 1.13 Yes 0 0 No -45 0.35 No 42 36.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41275757 - NM_007294 BRCA1 0 . . . 4.02 72.55 61 7.62 Yes 52 -1.98 No 0 0 No -33 0.45 No 49 78.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32894142 + NM_000059 BRCA2 0 . . . 1.29 71.68 59 5.15 No -2 0.2 No 0 0 No -29 0.53 No 60 49.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56812465 + NM_058216 RAD51C 0 . . . 4.09 76.22 15 5.38 No 49 1.49 Yes 0 0 No -36 0.39 No 40 78.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41268673 - NM_007294 BRCA1 0 . . . 1.05 63.8 24 4.79 No 48 0.58 No 0 0 No -23 0.77 Yes 42 43.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190655126 + NM_000534 PMS1 0 . . . 3.27 0 17 5.48 No 32 0.18 No 0 0 No -23 0.5 No 34 52.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41021168 + NM_001164269 RAD51 0 . . . 7.39 80.78 12 5.39 No 5 1.56 Yes 0 0 No -28 0.32 No 41 53.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68660896 + NM_133509 RAD51B 0 . . . 1.89 83.86 19 4.79 No 17 0.04 No 0 0 No -18 0.66 Yes 41 96.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59835827 - NM_032043 BRIP1 0 . . . 0 71.98 15 4.58 No 46 0.19 No 0 0 No -19 0.4 No 13 36.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47783235 + NM_000251 MSH2 0 . . . 0.84 73.1 21 3.53 No 5 1.06 Yes 0 0 No -20 0.84 Yes 53 57.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108226344 + NM_000051 ATM 0 . . . 3.78 82.88 33 5.65 Yes 60 -3.65 No 0 0 No -28 0.63 No 42 68.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69035283 + NM_133509 RAD51B 0 . . . 6.25 81.24 19 5 No 65 0.57 No 0 0 No -18 0.45 No 39 60.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108240846 + NM_000051 ATM 0 . . . 4.41 73.62 26 5.65 Yes 66 0.85 Yes 0 0 No -25 0.79 Yes 34 64.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69096907 + NM_133509 RAD51B 0 . . . 0.24 0 21 4.69 No -2 0.22 No 0 0 No -20 0.81 Yes 60 78.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105188555 + NM_021930 RINT1 0 . . . 2.28 76.09 31 4.45 No 38 1.23 Yes 0 0 No -30 0.35 No 52 67.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68811544 + NM_133509 RAD51B 0 . . . 1.06 63.14 16 4.69 No 48 0.21 No 0 0 No -20 0.35 No 42 56.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108209011 + NM_000051 ATM 0 . . . 0.17 63.6 27 5.74 Yes 37 -2.41 No 0 0 No -26 0.85 Yes 51 36.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68898071 + NM_133509 RAD51B 0 . . . 5.67 74.76 22 4.36 No 67 -1.07 No 0 0 No -18 0.3 No 46 89.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68919418 + NM_133509 RAD51B 0 . . . 3.09 78.43 34 5.83 Yes 64 1.85 Yes 0 0 No -27 0.49 No 27 82.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47692643 + NM_000251 MSH2 0 . . . 1.29 84.76 31 6.65 Yes 76 -4.09 No 0 0 No -30 0.66 Yes 46 68.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105203236 + NM_021930 RINT1 0 . . . 2 77.26 54 6.19 Yes 71 0.88 Yes 0 0 No -38 0.58 No 52 56.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131940838 + NM_005732 RAD50 0 . . . 1.59 68.36 17 5.29 No 16 1.11 Yes 0 0 No -16 0.56 No 42 93.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69022421 + NM_133509 RAD51B 0 . . . 2.57 82.63 29 5.83 Yes 14 1.12 Yes 0 0 No -28 0.66 Yes 44 71.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190663982 + NM_000534 PMS1 0 . . . 0.89 0 19 4.8 No 23 -2.66 No 0 0 No -18 0.6 No 49 52.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131955780 + NM_005732 RAD50 0 . . . 3.85 77.37 46 7.21 Yes 73 1.17 Yes 0 0 No -45 0.69 Yes 52 85.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47763830 + NM_000251 MSH2 0 . . . 0.59 68.49 21 4.51 No 59 -5.15 No 0 0 No -42 0.49 No 49 33.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89657675 + NM_000314 PTEN 0 . . . 5.8 75.36 83 7.58 Yes 6 1.55 Yes 0 0 No -31 0.65 No 44 66.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190652469 + NM_000534 PMS1 0 . . . 5.35 77.16 25 5.57 Yes 16 0.69 No 0 0 No -24 0.85 Yes 42 54.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131924985 + NM_005732 RAD50 0 . . . 8.76 85.31 89 9.63 Yes 22 0.28 No 0 0 No -29 0.59 No 48 53.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68295984 + NM_133509 RAD51B 0 . . . 2.9 0 17 5.28 No 58 0.77 No 0 0 No -40 0.59 No 28 82.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68828541 + NM_004360 CDH1 0 . . . 1.26 81.94 32 4.54 No 76 0.73 No 0 0 No -31 0.4 No 50 83.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68460209 + NM_133509 RAD51B 0 . . . 1.65 65.95 18 4.35 No -4 0.65 No 0 0 No -22 0.47 No 44 61.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68423975 + NM_133509 RAD51B 0 . . . 0.83 77.06 29 5.91 Yes 38 -3.42 No 0 0 No -28 0.84 Yes 51 34.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68984440 + NM_133509 RAD51B 0 . . . 2.26 60.92 33 6.61 Yes 15 0.82 Yes 0 0 No -32 0.88 Yes 43 74.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41018864 + NM_001164269 RAD51 0 . . . 0.32 74.68 22 4.3 No 4 0.1 No 0 0 No -21 0.56 No 54 78.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68357203 + NM_133509 RAD51B 0 . . . 3.97 75.24 10 4.69 No 29 1.18 Yes 0 0 No -27 0.45 No 44 75.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68600992 + NM_133509 RAD51B 0 . . . 1.95 76.07 19 4.3 No 41 1.1 Yes 0 0 No -24 0.68 Yes 46 91.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69000274 + NM_133509 RAD51B 0 . . . 0.02 71.46 26 3.97 No 16 -2.14 No 0 0 No -48 0.33 No 60 24.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56782813 + NM_058216 RAD51C 0 . . . 1.08 84.22 25 5.27 No 33 0.64 No 0 0 No -18 0.59 No 51 34.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69076305 + NM_133509 RAD51B 0 . . . 3.39 73.33 32 5.68 Yes 55 1.56 Yes 0 0 No -26 0.82 Yes 27 42.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68527505 + NM_133509 RAD51B 0 . . . 6.26 84.29 35 5.92 Yes 8 0.58 No 0 0 No -28 0.5 No 50 83.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90987510 - NM_002485 NBN 0 . . . 1.81 67.22 31 6.63 Yes 73 -5.8 No 0 0 No -30 0.69 Yes 51 50.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56812140 + NM_058216 RAD51C 0 . . . 7.02 86.24 28 5.28 No 7 1.22 Yes 0 0 No -23 0.52 No 51 91.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215621206 - NM_000465 BARD1 0 . . . 7.96 79.29 29 5.39 No 8 1.03 Yes 0 0 No -28 0.9 Yes 42 64.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41017750 + NM_001164269 RAD51 0 . . . 3.48 70.66 40 6.63 Yes 44 0.7 No 0 0 No -22 0.87 Yes 47 55.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75510860 - NM_001040108 MLH3 0 . . . 1.43 75.07 27 5.2 No 37 0.59 No 0 0 No -26 0.54 No 51 60.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215589168 - NM_000465 BARD1 0 . . . 7.76 83.71 13 5.57 Yes 11 2.05 Yes 0 0 No -18 0.7 Yes 47 67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52434459 - NM_004656 BAP1 0 . . . 2.32 0 30 5.24 No 17 0.76 No 0 0 No -57 0.62 No 41 78.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131891326 + NM_005732 RAD50 0 . . . 3.05 81.68 17 4.74 No 33 1.04 Yes 0 0 No -35 0.45 No 50 81.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108173386 + NM_000051 ATM 0 . . . 2.97 68.21 32 5.89 Yes 10 0.91 Yes 0 0 No -31 0.57 No 42 41.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68564940 + NM_133509 RAD51B 0 . . . 1.78 67.75 24 5.38 No 25 0.91 Yes 0 0 No -23 0.77 Yes 33 70.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23632201 - NM_024675 PALB2 0 . . . 4.76 67.8 43 5.52 No 34 1.18 Yes 0 0 No -25 0.67 Yes 24 75.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89662084 + NM_000314 PTEN 0 . . . 7.75 86.79 18 4.9 No 21 0.86 Yes 0 0 No -17 0.62 No 37 92.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68384904 + NM_133509 RAD51B 0 . . . 6.77 76.61 24 6.48 Yes 14 0.11 No 0 0 No -23 0.88 Yes 44 93.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68595827 + NM_133509 RAD51B 0 . . . 5.34 87.19 25 7.2 Yes 49 -2.04 No 0 0 No -24 0.58 No 51 96.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68560421 + NM_133509 RAD51B 0 . . . 9.8 89.19 33 6.24 Yes 59 1.02 Yes 0 0 No -32 0.72 Yes 40 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68429497 + NM_133509 RAD51B 0 . . . 2.33 65.39 29 6.35 Yes 18 0.14 No 0 0 No -28 0.8 Yes 42 49.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32899885 + NM_000059 BRCA2 0 . . . 3.52 72.26 35 5.83 Yes 30 1.19 Yes 0 0 No -23 0.77 Yes 28 68.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23614154 - NM_024675 PALB2 0 . . . 2.97 78.87 14 3.87 No 63 1.24 Yes 0 0 No -25 0.62 No 25 70.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131896692 + NM_005732 RAD50 0 . . . 0.72 0 44 6.28 Yes 59 1.94 Yes 0 0 No -43 0.6 No 26 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68446477 + NM_133509 RAD51B 0 . . . 5.61 82.5 16 6.56 Yes 44 0.62 No 0 0 No -28 0.53 No 32 55.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68709123 + NM_133509 RAD51B 0 . . . 11.29 93.35 15 5.74 Yes 11 1.89 Yes 0 0 No -45 0.5 No 47 91.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68922534 + NM_133509 RAD51B 0 . . . 1.55 78.24 25 6.24 Yes 59 -4.65 No 0 0 No -24 0.9 Yes 48 49.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68371272 + NM_133509 RAD51B 0 . . . 4.64 87.81 19 5.43 No 35 1.72 Yes 0 0 No -23 0.89 Yes 23 90.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59868524 - NM_032043 BRIP1 0 . . . 1.61 79.65 15 4.54 No 4 1.62 Yes 0 0 No -41 0.58 No 35 90.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68716836 + NM_133509 RAD51B 0 . . . 1.07 67.66 42 6.32 Yes -4 0.39 No 0 0 No -33 0.45 No 46 93.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152372816 - NM_005431 XRCC2 0 . . . 3.56 75.97 47 5.79 Yes 12 0.13 No 0 0 No -25 0.64 No 48 63.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68736837 + NM_133509 RAD51B 0 . . . 1.68 72.17 23 5.15 No 53 0.79 Yes 0 0 No -29 0.62 No 45 51.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69047806 + NM_133509 RAD51B 0 . . . 1.42 85.57 27 5.29 No 34 0.84 Yes 0 0 No -26 0.69 Yes 23 59.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108219352 + NM_000051 ATM 0 . . . 3.39 79.64 27 5.2 No 7 0.56 No 0 0 No -48 0.4 No 48 56.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108214080 + NM_000051 ATM 0 . . . 2.9 0 21 7.46 Yes 56 0.46 No 0 0 No -25 0.43 No 53 54.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59791185 - NM_032043 BRIP1 0 . . . 1.17 62.12 40 7.71 Yes 58 0.51 No 0 0 No -26 0.77 Yes 25 53.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47636315 + NM_000251 MSH2 0 . . . 3.74 74.23 17 5.57 Yes 25 -2.92 No 0 0 No -16 0.77 Yes 54 32.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69147659 + NM_133509 RAD51B 0 . . . 5.48 77.77 33 6.55 Yes 65 -2.87 No 0 0 No -32 0.91 Yes 49 72.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59880303 - NM_032043 BRIP1 0 . . . 8.14 84.5 29 5.66 Yes 74 -4.51 No 0 0 No -26 0.51 No 46 52.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37068439 + NM_000249 MLH1 0 . . . 4 69.32 25 5.39 No 15 0.73 No 0 0 No -22 0.68 Yes 43 81.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75506312 - NM_001040108 MLH3 0 . . . 5.3 0 38 7.67 Yes 3 0.38 No 0 0 No -37 0.42 No 55 57.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41006324 + NM_001164269 RAD51 0 . . . 6.15 78.53 39 6.19 Yes 57 0.74 No 0 0 No -32 0.49 No 48 75.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75506821 - NM_001040108 MLH3 0 . . . 0.59 76.72 27 6.16 Yes 9 0.71 No 0 0 No -26 0.96 Yes 49 39.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41263534 - NM_007294 BRCA1 0 . . . 2.78 83.78 40 6.39 Yes 72 0.93 Yes 0 0 No -39 0.53 No 37 54.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131970197 + NM_005732 RAD50 0 . . . 1.09 62.79 45 8.15 Yes 58 0.68 No 0 0 No -44 0.37 No 34 84.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68476631 + NM_133509 RAD51B 0 . . . 0.84 68.33 17 4.47 No 46 0.45 No 0 0 No -16 0.82 Yes 30 64.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68430620 + NM_133509 RAD51B 0 . . . 3.88 74.03 48 7.92 Yes 41 1.19 Yes 0 0 No -30 0.27 No 47 76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68839131 + NM_133509 RAD51B 0 . . . 1.75 72.89 17 5.26 No 38 -1.32 No 0 0 No -26 0.53 No 36 35.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29138703 - NM_001005735 CHEK2 0 . . . 2.47 75.32 14 4.47 No 4 1.78 Yes 0 0 No -25 0.22 No 38 37.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47645776 + NM_000251 MSH2 0 . . . 0.14 66.78 21 5.12 No 29 1.08 Yes 0 0 No -28 0.65 No 53 35.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68299106 + NM_133509 RAD51B 0 . . . 2.23 70.81 16 4.98 No 0 0.41 No 0 0 No -31 0.49 No 38 37.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29124468 - NM_001005735 CHEK2 0 . . . 3.04 73.5 12 5.57 Yes 62 1.11 Yes 0 0 No -26 0.73 Yes 45 78.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59806563 - NM_032043 BRIP1 0 . . . 4.66 86.2 22 6.23 Yes 9 1.18 Yes 0 0 No -21 0.42 No 49 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33448413 - NM_002878 RAD51D 0 . . . 5.26 79.39 23 5.92 Yes 42 -2.83 No 0 0 No -22 0.83 Yes 47 92.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47727183 + NM_000251 MSH2 0 . . . 7.19 83.79 31 5.97 Yes 11 1.58 Yes 0 0 No -30 0.74 Yes 47 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23632891 - NM_024675 PALB2 0 . . . 0.25 0 28 6.67 Yes 61 0.31 No 0 0 No -27 0.54 No 44 35.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105188409 + NM_021930 RINT1 0 . . . 5.74 82.31 15 5.83 Yes 57 0.99 Yes 0 0 No -27 0.68 Yes 43 54.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215658662 - NM_000465 BARD1 0 . . . 1.84 0 38 6.57 Yes 1 -2.2 No 0 0 No -37 0.65 No 39 82.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104164915 - NM_001100119 XRCC3 0 . . . 4.87 68.97 32 5.74 Yes 40 2.14 Yes 0 0 No -55 0.53 No 29 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75488048 - NM_001040108 MLH3 0 . . . 6.45 76.64 25 5.57 Yes 13 0.55 No 0 0 No -24 0.81 Yes 44 91.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23624705 - NM_024675 PALB2 0 . . . 1.65 80.88 33 6.24 Yes 37 1.54 Yes 0 0 No -36 0.68 Yes 54 39.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1208051 + NM_000455 STK11 0 . . . 3.55 76 31 6.52 Yes 38 -0.71 No 0 0 No -38 0.47 No 40 78.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89689294 + NM_000314 PTEN 0 . . . 3.62 76.22 24 5.2 No 1 1.2 Yes 0 0 No -30 0.71 Yes 38 27.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29138969 - NM_001005735 CHEK2 0 . . . 4.87 86.95 59 5.61 Yes 45 1.96 Yes 0 0 No -31 0.93 Yes 38 95.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84380809 - NM_139076 FAM175A 0 . . . 4.22 70.6 32 6 Yes 25 -3.35 No 0 0 No -31 0.64 No 33 68.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90952912 - NM_002485 NBN 0 . . . 8.03 91.78 23 4.99 No 60 1.65 Yes 0 0 No -22 0.9 Yes 25 54.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215639131 - NM_000465 BARD1 0 . . . 2.08 72.16 18 4.6 No 29 1.38 Yes 0 0 No -27 0.39 No 29 87.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37056073 + NM_000249 MLH1 0 . . . 4.61 79.47 17 6.48 Yes 40 0.93 Yes 0 0 No -26 0.5 No 51 47.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41266447 - NM_007294 BRCA1 0 . . . 3.3 77.77 25 4.8 No 30 0.52 No 0 0 No -24 0.94 Yes 48 82.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215643936 - NM_000465 BARD1 0 . . . 5.08 80.53 14 5.16 No 44 -3.71 No 0 0 No -9 0.44 No 29 51.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68818355 + NM_133509 RAD51B 0 . . . 1.67 72.38 34 5.74 Yes 47 -2.72 No 0 0 No -23 0.57 No 48 52.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7591909 - NM_000546 TP53 0 . . . 0.06 0 16 6.86 Yes 64 -4.57 No 0 0 No -26 0.32 No 51 40.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37085943 + NM_000249 MLH1 0 . . . 3.11 70.59 30 3.99 No 4 1.37 Yes 0 0 No -30 0.53 No 54 82.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68693793 + NM_133509 RAD51B 0 . . . 5.85 88.29 67 8.84 Yes 42 -4.89 No 0 0 No -20 0.7 Yes 46 82.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47738207 + NM_000251 MSH2 0 . . . 0.92 0 30 6.89 Yes 18 1.01 Yes 0 0 No -29 0.81 Yes 36 88.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190720736 + NM_000534 PMS1 0 . . . 1.41 59.42 29 5.83 Yes 29 0.67 No 0 0 No -28 0.81 Yes 36 56.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215621159 - NM_000465 BARD1 0 . . . 2.14 0 26 5.57 Yes 55 1 Yes 0 0 No -25 0.77 Yes 46 47.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69105277 + NM_133509 RAD51B 0 . . . 5.24 73.26 18 4.35 No -3 0.65 No 0 0 No -17 0.87 Yes 47 66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108184842 + NM_000051 ATM 0 . . . 5.6 83.46 17 8.11 Yes -4 0.91 Yes 0 0 No -25 0.76 Yes 46 69.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215590219 - NM_000465 BARD1 0 . . . 2.01 63.72 23 6.08 Yes -1 0.52 No 0 0 No -22 0.63 No 38 34.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29094791 - NM_001005735 CHEK2 0 . . . 7.95 95.35 19 8.72 Yes 36 0.58 No 0 0 No -18 0.62 No 48 89.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32919864 + NM_000059 BRCA2 0 . . . 1.66 63.87 29 4.62 No 7 0.56 No 0 0 No -29 0.85 Yes 51 61.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68338126 + NM_133509 RAD51B 0 . . . 3.02 65.4 24 5.09 No 76 -2.24 No 0 0 No -23 0.87 Yes 18 34.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23634055 - NM_024675 PALB2 0 . . . 1.81 0 25 5.57 Yes 11 0.29 No 0 0 No -32 0.63 No 47 90.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105175339 + NM_021930 RINT1 0 . . . 5.98 75.74 31 5.5 No 65 0.34 No 0 0 No -30 0.6 No 39 41.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59850206 - NM_032043 BRIP1 0 . . . 3.39 59.92 23 5.98 Yes 38 1.3 Yes 0 0 No -29 0.36 No 26 38.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131943384 + NM_005732 RAD50 0 . . . 5.99 77.29 28 6.24 Yes 72 0.32 No 0 0 No -27 0.75 Yes 48 83.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215657904 - NM_000465 BARD1 0 . . . 0.65 58.57 21 5.2 No 74 -1.72 No 0 0 No -18 0.46 No 40 66.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7582978 - NM_000546 TP53 0 . . . 4.11 76.39 17 5.54 No 18 1.95 Yes 0 0 No -24 0.53 No 40 88.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94168527 - NM_005591 MRE11 0 . . . 2.27 67.66 21 4.96 No 35 1.2 Yes 0 0 No -25 0.55 No 23 67.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59883673 - NM_032043 BRIP1 0 . . . 0.71 71.96 22 4.99 No 55 0.53 No 0 0 No -21 0.95 Yes 50 33.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190742151 + NM_000534 PMS1 0 . . . 8.29 81.37 16 4.33 No 1 1.16 Yes 0 0 No -52 0.62 No 49 75.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190709794 + NM_000534 PMS1 0 . . . 2.44 81.83 16 5.2 No 33 1.04 Yes 0 0 No -20 0.62 No 44 51.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105173902 + NM_021930 RINT1 0 . . . 5.83 85.06 19 5.28 No 1 -1.51 No 0 0 No -22 0.58 No 43 80.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59851404 - NM_032043 BRIP1 0 . . . 2.33 0 42 8.46 Yes 17 0.37 No 0 0 No -21 0.81 Yes 41 56.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68479228 + NM_133509 RAD51B 0 . . . 6.58 76.29 28 6.32 Yes 14 0.89 Yes 0 0 No -27 0.8 Yes 44 70.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6034403 - NM_000535 PMS2 0 . . . 1.82 83.13 29 4.26 No 28 1.07 Yes 0 0 No -28 0.36 No 39 49.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90967832 - NM_002485 NBN 0 . . . 7.7 79.06 33 5.83 Yes 12 0.78 Yes 0 0 No -32 0.42 No 46 68.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59902456 - NM_032043 BRIP1 0 . . . 2.1 72.33 32 5.4 No 30 1.05 Yes 0 0 No -31 0.56 No 28 74.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47738782 + NM_000251 MSH2 0 . . . 6.1 79.33 45 6.78 Yes 61 1.17 Yes 0 0 No -37 0.54 No 50 56.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108193262 + NM_000051 ATM 0 . . . 2.08 74.88 20 3.7 No 32 -3.85 No 0 0 No -46 0.78 Yes 59 65.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89665624 + NM_000314 PTEN 0 . . . 5.07 74.05 20 6.93 Yes 39 0.48 No 0 0 No -19 0.6 No 39 58.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69111748 + NM_133509 RAD51B 0 . . . 4.12 65.86 27 5.7 Yes 1 0.91 Yes 0 0 No -23 0.84 Yes 49 68.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68779374 + NM_133509 RAD51B 0 . . . 1.71 0 31 4.01 No 24 0.85 Yes 0 0 No -30 0.7 Yes 29 52.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68771269 + NM_133509 RAD51B 0 . . . 2.65 63.51 18 5.73 Yes 39 0.13 No 0 0 No -31 0.42 No 13 73.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59931472 - NM_032043 BRIP1 0 . . . 1.62 75.88 10 5.06 No 54 1.45 Yes 0 0 No -21 0.38 No 51 51.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68636723 + NM_133509 RAD51B 0 . . . 1.76 74.04 27 6.17 Yes 0 0.72 No 0 0 No -26 0.66 No 46 48.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68887444 + NM_133509 RAD51B 0 . . . 3.55 78.61 16 4 No 47 0.51 No 0 0 No -29 0.41 No 50 65.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68499274 + NM_133509 RAD51B 0 . . . 4.12 72.31 25 5.38 No 69 0.36 No 0 0 No -22 0.69 Yes 24 59.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47788292 + NM_000251 MSH2 0 . . . 4.16 79.06 26 4.28 No 1 1.64 Yes 0 0 No -19 0.32 No 41 52.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32909172 + NM_000059 BRCA2 0 . . . 1.75 67.91 15 5.45 No 28 0.14 No 0 0 No -26 0.64 No 52 42.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68800901 + NM_133509 RAD51B 0 . . . 2.74 74.1 58 7.54 Yes 0 1.34 Yes 0 0 No -29 0.66 No 58 26.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108171687 + NM_000051 ATM 0 . . . 1.13 65.26 25 5.38 No 27 -2.13 No 0 0 No -22 0.73 Yes 53 54.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41236925 - NM_007294 BRCA1 0 . . . 2.2 65.05 17 6.93 Yes 27 1.05 Yes 0 0 No -27 0.37 No 25 45.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59895950 - NM_032043 BRIP1 0 . . . 4.2 84.12 29 5.73 Yes 5 1.12 Yes 0 0 No -28 0.75 Yes 53 88.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190676065 + NM_000534 PMS1 0 . . . 0.35 66.86 9 5.1 No 4 0.15 No 0 0 No -46 0.55 No 54 85.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89710693 + NM_000314 PTEN 0 . . . 0.42 74.73 52 7.17 Yes 34 1.05 Yes 0 0 No -29 0.58 No 24 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33448574 - NM_002878 RAD51D 0 . . . 4.24 76.34 20 7.14 Yes 6 0.15 No 0 0 No -19 0.77 Yes 52 67.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131970030 + NM_005732 RAD50 0 . . . 5.92 66.01 21 4.9 No 5 -1.89 No 0 0 No -20 0.71 Yes 44 46.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68905817 + NM_133509 RAD51B 0 . . . 0.22 0 26 5.83 Yes 38 1.72 Yes 0 0 No -25 0.65 No 20 86.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89654911 + NM_000314 PTEN 0 . . . 0.18 55.88 17 5.39 No 20 0.69 No 0 0 No -27 0.56 No 38 36.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68890678 + NM_133509 RAD51B 0 . . . 6.3 76.35 15 4.58 No 39 1.1 Yes 0 0 No -32 0.59 No 32 59.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94160056 - NM_005591 MRE11 0 . . . 6.98 80.69 21 5.2 No 14 0.1 No 0 0 No -27 0.58 No 44 62.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68621953 + NM_133509 RAD51B 0 . . . 3.94 84.95 13 5 No 74 -1.38 No 0 0 No -18 0.23 No 19 67.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131932386 + NM_005732 RAD50 0 . . . 2.58 81.38 26 5.45 No -3 0.23 No 0 0 No -23 0.79 Yes 54 65.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108157435 + NM_000051 ATM 0 . . . 9.98 84.96 26 5.29 No 0 0.32 No 0 0 No -25 0.6 No 45 61.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68992360 + NM_133509 RAD51B 0 . . . 5.45 84.93 20 5.1 No 7 1.13 Yes 0 0 No -49 0.95 Yes 44 93.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47740057 + NM_000251 MSH2 0 . . . 4.45 79.96 15 4.49 No 36 1.14 Yes 0 0 No -47 0.49 No 49 90.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68817242 + NM_133509 RAD51B 0 . . . 1.94 87.86 15 5.44 No 4 0.63 No 0 0 No -19 0.72 Yes 54 31.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29102828 - NM_001005735 CHEK2 0 . . . 7.59 87.51 18 4.9 No 8 0.57 No 0 0 No -50 0.61 No 50 85.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21973380 - NM_000077 CDKN2A 0 . . . 0.17 67.5 15 4.36 No 48 0.39 No 0 0 No -25 0.53 No 53 22.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190660285 + NM_000534 PMS1 0 . . . 8.23 84.64 30 5.39 No 5 2.2 Yes 0 0 No -21 0.76 Yes 47 67.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7578114 - NM_000546 TP53 0 . . . 3.76 0 26 5.1 No 62 -4.55 No 0 0 No -25 0.58 No 45 57.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69135503 + NM_133509 RAD51B 0 . . . 2.28 73.08 33 5.93 Yes 29 1.41 Yes 0 0 No -32 0.6 No 36 57.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59859581 - NM_032043 BRIP1 0 . . . 6.89 83.82 24 5.87 Yes 6 1.25 Yes 0 0 No -23 0.74 Yes 42 85.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131927391 + NM_005732 RAD50 0 . . . 2.76 77.52 34 5.92 Yes 43 -2 No 0 0 No -25 0.29 No 32 50.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59873475 - NM_032043 BRIP1 0 . . . 1.46 67.47 21 3.82 No 27 -3.55 No 0 0 No -49 0.51 No 51 31.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69018253 + NM_133509 RAD51B 0 . . . 5.99 85.68 27 5.88 Yes -4 0.67 No 0 0 No -27 0.68 Yes 44 69.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59869265 - NM_032043 BRIP1 0 . . . 3.36 0 53 7.87 Yes 28 0.15 No 0 0 No -41 0.58 No 35 89.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190673420 + NM_000534 PMS1 0 . . . 8.99 87.8 32 6.01 Yes 50 0.5 No 0 0 No -31 0.74 Yes 41 41.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59774344 - NM_032043 BRIP1 0 . . . 2.3 84.41 18 4.24 No 30 0.34 No 0 0 No -17 0.79 Yes 28 86.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68334731 + NM_133509 RAD51B 0 . . . 0.4 80.6 32 5.92 Yes 29 0.4 No 0 0 No -26 0.4 No 45 50.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69151494 + NM_133509 RAD51B 0 . . . 3.87 70.8 25 5.35 No -1 -0.1 No 0 0 No -24 0.59 No 27 53.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1209552 + NM_000455 STK11 0 . . . 1.79 80.22 15 5.2 No 15 0.05 No 0 0 No -60 0.39 No 43 90.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41012616 + NM_001164269 RAD51 0 . . . 3.56 78.18 22 5.29 No 7 1.19 Yes 0 0 No -22 0.38 No 37 57.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84395269 - NM_139076 FAM175A 0 . . . 2.93 84.79 25 5.04 No 2 1.51 Yes 0 0 No -24 0.61 No 17 48.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33448323 - NM_002878 RAD51D 0 . . . 1.21 67.46 22 8.74 Yes 20 1.92 Yes 0 0 No -22 0.81 Yes 38 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59870484 - NM_032043 BRIP1 0 . . . 7 79.77 32 6.16 Yes 19 0.26 No 0 0 No -31 0.62 No 39 60.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40990207 + NM_001164269 RAD51 0 . . . 0.07 61.64 37 5.98 Yes 67 0.38 No 0 0 No -30 0.65 No 46 52.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94199613 - NM_005591 MRE11 0 . . . 0.06 80.45 59 8.76 Yes 16 0.02 No 0 0 No -24 0.69 Yes 51 49.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47805596 + NM_000251 MSH2 0 . . . 9.31 91.51 22 5.19 No 11 1.1 Yes 0 0 No -22 0.52 No 47 96.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68897001 + NM_133509 RAD51B 0 . . . 3.91 70.74 44 4.85 No 14 0.3 No 0 0 No -32 0.53 No 43 83.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68587858 + NM_133509 RAD51B 0 . . . 7.9 75.7 31 5.4 No 46 0.36 No 0 0 No -25 0.83 Yes 47 73.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94188020 - NM_005591 MRE11 0 . . . 4.02 71.58 28 5.38 No 11 0.59 No 0 0 No -27 0.66 No 47 61.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68301561 + NM_133509 RAD51B 0 . . . 4.11 76.18 23 5.39 No 18 1.04 Yes 0 0 No -22 0.91 Yes 29 77.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152349171 - NM_005431 XRCC2 0 . . . 3.43 85.66 22 3.46 No 9 1.34 Yes 0 0 No -21 0.79 Yes 49 97.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59933292 - NM_032043 BRIP1 0 . . . 7.05 82.86 25 4.81 No 26 1.3 Yes 0 0 No -21 0.56 No 43 48.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68958428 + NM_133509 RAD51B 0 . . . 3.45 78.82 31 5.87 Yes 63 0.4 No 0 0 No -25 0.89 Yes 44 40.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68463619 + NM_133509 RAD51B 0 . . . 1.11 68.96 30 5.57 Yes 50 -4.56 No 0 0 No -27 0.51 No 51 57.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1212385 + NM_000455 STK11 0 . . . 6.52 76.41 18 4.47 No 5 1.52 Yes 0 0 No -17 0.75 Yes 48 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41241313 - NM_007294 BRCA1 0 . . . 5.27 84.17 15 5.5 No 27 1.25 Yes 0 0 No -55 0.68 Yes 44 58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41231610 - NM_007294 BRCA1 0 . . . 6 76.08 16 5.64 Yes 32 1.36 Yes 0 0 No -28 0.92 Yes 26 55.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190648877 + NM_000534 PMS1 0 . . . 5.09 79.01 30 3.94 No 16 0.81 Yes 0 0 No -29 0.45 No 42 75.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68703685 + NM_133509 RAD51B 0 . . . 4.61 77.36 24 5.41 No 37 1.06 Yes 0 0 No -23 0.85 Yes 44 58.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47705799 + NM_000251 MSH2 0 . . . 6.91 82.21 31 5.58 Yes 57 1.05 Yes 0 0 No -30 0.68 Yes 41 37.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69053688 + NM_133509 RAD51B 0 . . . 0.46 77 18 7 Yes 75 -4.73 No 0 0 No -17 0.58 No 44 46.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68845039 + NM_133509 RAD51B 0 . . . 6.4 79.16 17 5.45 No 53 0.82 Yes 0 0 No -16 0.64 No 47 74.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68508910 + NM_133509 RAD51B 0 . . . 4.05 84.31 28 5.15 No 14 0.38 No 0 0 No -27 0.36 No 44 69.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21988595 - NM_000077 CDKN2A 0 . . . 8.25 77.05 21 5.31 No 10 1.6 Yes 0 0 No -21 0.56 No 48 94.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131937131 + NM_005732 RAD50 0 . . . 0.75 0 26 5 No 64 0.35 No 0 0 No -21 0.72 Yes 39 41.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215671570 - NM_000465 BARD1 0 . . . 2.61 72.13 22 8.23 Yes 3 0.75 No 0 0 No -25 0.66 No 11 66.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131922320 + NM_005732 RAD50 0 . . . 1.45 64.21 19 5 No 55 0.21 No 0 0 No -18 0.39 No 39 59.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68852965 + NM_133509 RAD51B 0 . . . 8.57 85.57 42 7.75 Yes 73 -2.54 No 0 0 No -34 0.47 No 48 90.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215616557 - NM_000465 BARD1 0 . . . 1.13 64.99 22 7.07 Yes 31 -3.43 No 0 0 No -21 0.93 Yes 41 38.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68589985 + NM_133509 RAD51B 0 . . . 1.97 77.15 26 4.23 No 2 -0.91 No 0 0 No -25 0.77 Yes 44 74.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89666157 + NM_000314 PTEN 0 . . . 5.31 72.32 31 4.03 No 12 1.25 Yes 0 0 No -23 0.48 No 45 64.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68464863 + NM_133509 RAD51B 0 . . . 1.73 63.23 10 6.16 Yes 23 0.54 No 0 0 No -19 0.51 No 41 92.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105180212 + NM_021930 RINT1 0 . . . 2.88 78.02 12 4.44 No 15 0.71 No 0 0 No -21 0.35 No 49 94.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68382138 + NM_133509 RAD51B 0 . . . 0.98 0 24 6 Yes 75 0.59 No 0 0 No -23 0.5 No 50 37.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37037221 + NM_000249 MLH1 0 . . . 8.33 89.75 16 4.08 No 4 1 Yes 0 0 No -19 0.5 No 54 54.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47746378 + NM_000251 MSH2 0 . . . 3.39 60.8 18 4.58 No 14 0.64 No 0 0 No -17 0.77 Yes 39 86.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68863880 + NM_004360 CDH1 0 . . . 3.78 84.41 28 5.48 No 49 1.79 Yes 0 0 No -27 0.54 No 17 79.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94226231 - NM_005591 MRE11 0 . . . 6.23 87.59 50 6.05 Yes 51 -3.57 No 0 0 No -24 0.77 Yes 41 66.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69092538 + NM_133509 RAD51B 0 . . . 0.43 0 31 6.78 Yes 17 0.85 Yes 0 0 No -30 0.87 Yes 41 89.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41218881 - NM_007294 BRCA1 0 . . . 1.43 80.22 10 4 No 67 -4.95 No 0 0 No -27 0.61 No 43 72.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215604003 - NM_000465 BARD1 0 . . . 0.03 0 25 5.18 No 68 1.02 Yes 0 0 No -24 0.9 Yes 41 81.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68525020 + NM_133509 RAD51B 0 . . . 7.7 87.77 21 4.06 No 47 1.87 Yes 0 0 No -31 0.44 No 39 78.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59900828 - NM_032043 BRIP1 0 . . . 3.43 69.25 20 5.6 Yes 29 1.11 Yes 0 0 No -26 0.47 No 48 70.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68817942 + NM_004360 CDH1 0 . . . 3.91 80.46 30 6.18 Yes 48 0.42 No 0 0 No -33 0.39 No 38 48.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89682983 + NM_000314 PTEN 0 . . . 7.84 79.96 28 5.48 No 63 0.46 No 0 0 No -27 0.67 Yes 45 82.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68896761 + NM_133509 RAD51B 0 . . . 0.3 0 17 6.16 Yes 9 0.3 No 0 0 No -34 0.38 No 22 83.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131914725 + NM_005732 RAD50 0 . . . 2.53 69.16 19 4.42 No 70 1.14 Yes 0 0 No -23 0.85 Yes 15 65.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41241696 - NM_007294 BRCA1 0 . . . 1.26 64.57 23 6.16 Yes 17 0.7 No 0 0 No -22 0.83 Yes 41 92.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32892828 + NM_000059 BRCA2 0 . . . 2.17 82.46 11 4.6 No 11 1.5 Yes 0 0 No -21 0.53 No 47 89.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68534620 + NM_133509 RAD51B 0 . . . 2.98 76.04 22 5.64 Yes 58 -3.87 No 0 0 No -21 0.6 No 47 89.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105186662 + NM_021930 RINT1 0 . . . 5.41 82.76 24 4.8 No 57 -4.4 No 0 0 No -22 0.9 Yes 37 40.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47774867 + NM_000251 MSH2 0 . . . 2.02 0 19 4.51 No 45 1.05 Yes 0 0 No -18 0.56 No 13 84.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131936306 + NM_005732 RAD50 0 . . . 5.68 75.25 19 4.69 No 17 0.39 No 0 0 No -17 0.77 Yes 36 75.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68805955 + NM_133509 RAD51B 0 . . . 2.33 72.46 31 5.55 No NA NA NA 0 0 No -26 0.74 Yes 18 76.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89634088 + NM_000314 PTEN 0 . . . 5.06 72.33 26 5.66 Yes 70 0.7 No 0 0 No -22 0.6 No 46 62.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52439627 - NM_004656 BAP1 0 . . . 0.39 77.09 45 4.77 No 74 0.51 No 0 0 No -31 0.51 No 52 33.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68854214 + NM_133509 RAD51B 0 . . . 1.93 63.06 15 4.93 No 29 0.86 Yes 0 0 No -53 0.78 Yes 46 42.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56791938 + NM_058216 RAD51C 0 . . . 0.05 84.22 28 5.38 No 33 1.09 Yes 0 0 No -27 0.58 No 50 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90991786 - NM_002485 NBN 0 . . . 4.82 75.19 17 5.06 No 71 0.24 No 0 0 No -16 0.49 No 45 50.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105183450 + NM_021930 RINT1 0 . . . 4.71 84.22 25 6.92 Yes 8 0.82 Yes 0 0 No -24 0.8 Yes 50 73.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190657305 + NM_000534 PMS1 0 . . . 1.86 0 19 4.04 No 58 0.15 No 0 0 No -19 0.79 Yes 49 57.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47803564 + NM_000251 MSH2 0 . . . 5.9 77.87 24 5.48 No 72 0.69 No 0 0 No -23 0.54 No 38 83.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47684506 + NM_000251 MSH2 0 . . . 7.54 88.89 29 5.56 Yes 0 0.16 No 0 0 No -28 0.73 Yes 50 84.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108197654 + NM_000051 ATM 0 . . . 2.54 71.84 44 7.47 Yes 16 1.49 Yes 0 0 No -31 0.32 No 42 95.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152351553 - NM_005431 XRCC2 0 . . . 1.22 77.48 64 4.77 No 47 1.33 Yes 0 0 No -42 0.66 Yes 38 58.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108157699 + NM_000051 ATM 0 . . . 6.56 84.76 19 5 No 36 0.9 Yes 0 0 No -18 0.52 No 49 64.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69081594 + NM_133509 RAD51B 0 . . . 2.5 64.7 17 5.29 No 62 -4.94 No 0 0 No -16 0.68 Yes 47 60.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68626898 + NM_133509 RAD51B 0 . . . 7.86 81.75 34 5.74 Yes 6 1.14 Yes 0 0 No -29 0.72 Yes 44 57.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108241152 + NM_000051 ATM 0 . . . 0.89 64.62 17 5.74 Yes 38 0.64 No 0 0 No -28 0.24 No 44 56.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68577098 + NM_133509 RAD51B 0 . . . 0.81 0 28 7.87 Yes 29 0.54 No 0 0 No -27 0.91 Yes 29 63.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41241163 - NM_007294 BRCA1 0 . . . 3.92 86.29 23 6.06 Yes 11 0.76 No 0 0 No -22 0.76 Yes 47 91.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68361677 + NM_133509 RAD51B 0 . . . 3.77 79.36 16 4.36 No 8 1.06 Yes 0 0 No -21 0.21 No 45 70.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29104914 - NM_001005735 CHEK2 0 . . . 3.48 84.17 26 4.74 No 70 0.89 Yes 0 0 No -25 0.88 Yes 20 26.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68654674 + NM_133509 RAD51B 0 . . . 1.06 0 18 4.96 No 57 1.1 Yes 0 0 No -17 0.4 No 53 82.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190681112 + NM_000534 PMS1 0 . . . 6.78 83.81 22 4.69 No 45 0.92 Yes 0 0 No -21 0.91 Yes 43 50.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37067688 + NM_000249 MLH1 0 . . . 0.94 66.73 34 6.7 Yes 75 1.73 Yes 0 0 No -33 0.44 No 47 53.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29131087 - NM_001005735 CHEK2 0 . . . 2.17 62.51 21 5 No 32 0.72 No 0 0 No -45 0.57 No 51 40.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68820868 + NM_133509 RAD51B 0 . . . 8.39 72.94 28 3.83 No 12 0.87 Yes 0 0 No -27 0.82 Yes 46 57.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40987731 + NM_001164269 RAD51 0 . . . 4.99 74.03 31 4.7 No 15 -0.68 No 0 0 No -35 0.57 No 43 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29090862 - NM_001005735 CHEK2 0 . . . 4.87 84.17 55 7.42 Yes 19 1.4 Yes 0 0 No -30 0.4 No 39 61.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68774632 + NM_004360 CDH1 0 . . . 1.01 65.62 28 3.44 No 50 1.12 Yes 0 0 No -23 0.95 Yes 45 88.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190738254 + NM_000534 PMS1 0 . . . 0.32 66.33 31 6.08 Yes 50 0.68 No 0 0 No -30 0.7 Yes 11 63.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52438568 - NM_004656 BAP1 0 . . . 0.43 67.79 33 6.08 Yes 45 1.51 Yes 0 0 No -32 0.46 No 13 64.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69022369 + NM_133509 RAD51B 0 . . . 3.07 86.5 41 8.4 Yes 24 0.63 No 0 0 No -26 0.45 No 50 79.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89626236 + NM_000314 PTEN 0 . . . 1.48 72.71 74 8.83 Yes 76 0.79 Yes 0 0 No -39 0.65 No 49 72.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94173718 - NM_005591 MRE11 0 . . . 1.91 59.48 17 6.93 Yes 8 1.21 Yes 0 0 No -23 0.53 No 37 74.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68770343 + NM_133509 RAD51B 0 . . . 0.31 50.93 30 5.36 No 24 0.62 No 0 0 No -35 0.83 Yes 47 54.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68918562 + NM_133509 RAD51B 0 . . . 3.79 72.96 28 4.34 No 38 0.77 No 0 0 No -27 0.53 No 20 69.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69088947 + NM_133509 RAD51B 0 . . . 0.06 0 19 4.47 No 68 -4.04 No 0 0 No -18 0.85 Yes 47 94.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152365012 - NM_005431 XRCC2 0 . . . 1.41 84.22 21 5.08 No 33 1.14 Yes 0 0 No -42 0.49 No 50 53.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89685423 + NM_000314 PTEN 0 . . . 3.07 77.75 23 4.7 No 43 0.08 No 0 0 No -45 0.71 Yes 53 47.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37036482 + NM_000249 MLH1 0 . . . 3.45 85.02 27 5.74 Yes 3 1.16 Yes 0 0 No -26 0.77 Yes 44 53.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108126271 + NM_000051 ATM 0 . . . 1.87 87 28 5.83 Yes 33 0.59 No 0 0 No -27 0.84 Yes 50 44.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6035992 - NM_000535 PMS2 0 . . . 1.91 79.24 30 5.96 Yes 34 1.17 Yes 0 0 No -27 0.51 No 24 64.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108114498 + NM_000051 ATM 0 . . . 4.69 83.55 17 4.68 No 55 0.97 Yes 0 0 No -22 0.61 No 49 75.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68987361 + NM_133509 RAD51B 0 . . . 8.18 89.46 9 4.9 No 32 0.46 No 0 0 No -28 0.42 No 49 85.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68860032 + NM_133509 RAD51B 0 . . . 1.81 0 27 5.2 No 18 0.99 Yes 0 0 No -55 0.83 Yes 40 92.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68821914 + NM_004360 CDH1 0 . . . 3.25 80.12 42 5.09 No 8 1.6 Yes 0 0 No -37 0.64 No 50 89.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68625238 + NM_133509 RAD51B 0 . . . 1.4 59.34 31 6.08 Yes 67 0.77 Yes 0 0 No -30 0.58 No 42 53.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68675992 + NM_133509 RAD51B 0 . . . 1.61 72.94 18 4.9 No 52 1.26 Yes 0 0 No -21 0.43 No 51 82.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29129559 - NM_001005735 CHEK2 0 . . . 7.01 79.04 21 5.02 No 10 0.35 No 0 0 No -20 0.58 No 48 90.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68557449 + NM_133509 RAD51B 0 . . . 3.86 0 17 5.52 No 48 0.72 No 0 0 No -27 0.68 Yes 36 52.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23644792 - NM_024675 PALB2 0 . . . 5.64 68.38 18 4.69 No 73 0.27 No 0 0 No -17 0.44 No 52 63.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144952 + NM_133509 RAD51B 0 . . . 3.72 77.14 50 7.25 Yes 40 1.55 Yes 0 0 No -49 0.47 No 36 26.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68383546 + NM_133509 RAD51B 0 . . . 3.76 74.48 15 5.48 No 71 0.77 No 0 0 No -25 0.34 No 43 73.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32939488 + NM_000059 BRCA2 0 . . . 5.09 73.24 33 5.91 Yes 17 0.13 No 0 0 No -32 0.42 No 49 79.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6020720 - NM_000535 PMS2 0 . . . 1.63 0 18 4.9 No 46 1.7 Yes 0 0 No -40 0.47 No 49 39.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68523076 + NM_133509 RAD51B 0 . . . 4.01 80.58 21 5 No 34 1.2 Yes 0 0 No -24 0.58 No 42 61.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90952611 - NM_002485 NBN 0 . . . 0.26 70.03 94 9.25 Yes 59 1.74 Yes 0 0 No -42 0.4 No 54 49.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41242816 - NM_007294 BRCA1 0 . . . 6.02 72.67 17 5.26 No 47 1.73 Yes 0 0 No -21 0.81 Yes 30 61.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68591821 + NM_133509 RAD51B 0 . . . 2.13 73.9 13 5.34 No 36 -2.5 No 0 0 No -22 0.51 No 43 69.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94157919 - NM_005591 MRE11 0 . . . 0.78 67.82 12 4.8 No 71 1.27 Yes 0 0 No -20 0.77 Yes 14 88.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1225072 + NM_000455 STK11 0 . . . 4.66 71.52 37 4.7 No 31 1.42 Yes 0 0 No -32 0.5 No 62 34.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69027204 + NM_133509 RAD51B 0 . . . 0.09 74.68 14 5.2 No 4 0.41 No 0 0 No -22 0.64 No 54 85.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105179445 + NM_021930 RINT1 0 . . . 4.84 89.64 21 6.4 Yes 0 0.75 No 0 0 No -20 0.78 Yes 35 52.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108216200 + NM_000051 ATM 0 . . . 4.71 81.1 36 6.32 Yes 17 0.07 No 0 0 No -21 0.25 No 41 86.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23640502 - NM_024675 PALB2 0 . . . 4.13 88.7 23 5.88 Yes 47 -2.32 No 0 0 No -22 0.89 Yes 50 43.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68796181 + NM_004360 CDH1 0 . . . 5.21 78.05 15 4.58 No 3 1.58 Yes 0 0 No -57 0.46 No 43 42.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68396437 + NM_133509 RAD51B 0 . . . 9.6 85.47 18 4.49 No 32 0.45 No 0 0 No -22 0.76 Yes 46 84.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41201137 - NM_007294 BRCA1 0 . . . 2.97 72.8 36 6.24 Yes 19 0.32 No 0 0 No -27 0.59 No 50 61.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68794082 + NM_133509 RAD51B 0 . . . 3.74 81.25 19 4.36 No 46 -2.77 No 0 0 No -18 0.88 Yes 43 36.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94222136 - NM_005591 MRE11 0 . . . 3.02 73.98 23 5.82 Yes 3 0.04 No 0 0 No -28 0.63 No 45 72.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41207690 - NM_007294 BRCA1 0 . . . 2.06 0 12 3.81 No 45 0.92 Yes 0 0 No -38 0.57 No 56 49.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68309894 + NM_133509 RAD51B 0 . . . 3.97 75.24 38 6.69 Yes 42 2 Yes 0 0 No -37 0.43 No 16 59.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68778161 + NM_133509 RAD51B 0 . . . 7.98 84.69 12 5.39 No 29 0.96 Yes 0 0 No -50 0.59 No 45 77.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21990716 - NM_000077 CDKN2A 0 . . . 0.2 0 16 4.31 No 3 0.2 No 0 0 No -15 0.32 No 55 55.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152352207 - NM_005431 XRCC2 0 . . . 2.92 73.34 21 4.49 No 63 0.51 No 0 0 No -48 0.63 No 49 92.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215673888 - NM_000465 BARD1 0 . . . 2.3 87.25 18 4.9 No 41 1.38 Yes 0 0 No -17 0.54 No 48 37.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94191302 - NM_005591 MRE11 0 . . . 5.94 78.51 34 8.71 Yes 32 0.9 Yes 0 0 No -33 0.68 Yes 53 60.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108190613 + NM_000051 ATM 0 . . . 3.66 70.86 23 4.66 No 15 0.22 No 0 0 No -48 0.31 No 43 92.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190674388 + NM_000534 PMS1 0 . . . 1.63 63.83 28 4.74 No 47 -5.66 No 0 0 No -27 0.88 Yes 49 28.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104165701 - NM_001100119 XRCC3 0 . . . 7 77.24 17 5.39 No 32 -2.44 No 0 0 No -16 0.53 No 44 53.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68942627 + NM_133509 RAD51B 0 . . . 4.82 78.73 21 5 No 2 0.74 No 0 0 No -20 0.85 Yes 47 57.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89728299 + NM_000314 PTEN 0 . . . 2.89 66.01 17 5.1 No 29 0.23 No 0 0 No -21 0.55 No 40 85.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37033839 + NM_000249 MLH1 0 . . . 0.85 66.65 25 6.06 Yes 62 0.87 Yes 0 0 No -24 0.53 No 50 43.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108179990 + NM_000051 ATM 0 . . . 6.46 78.98 25 6.3 Yes 18 0.69 No 0 0 No -25 0.72 Yes 46 67.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68788818 + NM_133509 RAD51B 0 . . . 1.48 65.69 27 4.04 No 12 0.84 Yes 0 0 No -27 0.84 Yes 50 49.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68988277 + NM_133509 RAD51B 0 . . . 1.82 73.87 25 4.44 No 0 0.05 No 0 0 No -24 0.87 Yes 41 86.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68833218 + NM_133509 RAD51B 0 . . . 1.67 76.82 16 4.71 No 69 -5.12 No 0 0 No -28 0.86 Yes 47 90.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108118812 + NM_000051 ATM 0 . . . 3.04 77.79 21 6.08 Yes 18 0.58 No 0 0 No -24 0.79 Yes 35 70.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68521507 + NM_133509 RAD51B 0 . . . 2.52 69.16 26 5.09 No 63 0.12 No 0 0 No -23 0.58 No 26 58.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68486871 + NM_133509 RAD51B 0 . . . 3.42 72.65 68 8.94 Yes 43 2.13 Yes 0 0 No -28 0.68 Yes 15 95.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68453630 + NM_133509 RAD51B 0 . . . 3.6 85.02 15 4.91 No 57 1.07 Yes 0 0 No -23 0.7 Yes 54 74.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69032725 + NM_133509 RAD51B 0 . . . 2.56 74.16 16 3.26 No 55 0.77 Yes 0 0 No -21 0.56 No 54 66.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68841370 + NM_133509 RAD51B 0 . . . 2.24 75.29 40 6.22 Yes 67 -5.84 No 0 0 No -20 0.37 No 58 38.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215606781 - NM_000465 BARD1 0 . . . 1.53 67.85 48 7 Yes 65 0.79 Yes 0 0 No -39 0.63 No 13 34.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90973432 - NM_002485 NBN 0 . . . 6.13 74.75 29 7.82 Yes 14 0.84 Yes 0 0 No -28 0.71 Yes 44 71.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90948616 - NM_002485 NBN 0 . . . 3.7 75.7 51 4.86 No 12 0.86 Yes 0 0 No -34 0.84 Yes 46 78.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68907736 + NM_133509 RAD51B 0 . . . 0.88 66.21 34 6.53 Yes 47 0.99 Yes 0 0 No -33 0.67 Yes 43 60.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131939878 + NM_005732 RAD50 0 . . . 6.2 80.31 22 8.06 Yes 54 -1.08 No 0 0 No -37 0.66 No 43 74.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105171683 + NM_021930 RINT1 0 . . . 4.42 84.22 17 5.83 Yes 33 1.37 Yes 0 0 No -19 0.62 No 50 70.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90957602 - NM_002485 NBN 0 . . . 7 71.72 31 5.73 Yes 42 0.46 No 0 0 No -30 0.69 Yes 44 46.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68334580 + NM_133509 RAD51B 0 . . . 4.23 70.99 16 4.47 No 16 0.85 Yes 0 0 No -15 0.57 No 42 94.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69012466 + NM_133509 RAD51B 0 . . . 1.38 78.12 18 4.69 No 42 1.08 Yes 0 0 No -40 0.88 Yes 23 55.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68982688 + NM_133509 RAD51B 0 . . . 3.25 80.12 15 5.05 No 75 0.84 Yes 0 0 No -26 0.46 No 50 57.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68980004 + NM_133509 RAD51B 0 . . . 3.6 74.83 32 5.83 Yes 75 -4.62 No 0 0 No -31 0.66 No 48 77.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68949436 + NM_133509 RAD51B 0 . . . 2.03 76.93 21 4.69 No 2 0.87 Yes 0 0 No -20 0.83 Yes 56 63.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68348308 + NM_133509 RAD51B 0 . . . 2.25 0 21 6.45 Yes 7 0.45 No 0 0 No -20 0.85 Yes 51 82.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190680493 + NM_000534 PMS1 0 . . . 0.11 0 35 5.74 Yes 74 -6.52 No 0 0 No -18 0.56 No 45 59.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68319345 + NM_133509 RAD51B 0 . . . 4.69 84.69 30 5.99 Yes 41 0.55 No 0 0 No -32 0.66 No 50 62.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90965074 - NM_002485 NBN 0 . . . 8.77 87.65 29 6.71 Yes 33 0.37 No 0 0 No -28 0.96 Yes 45 73.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6044262 - NM_000535 PMS2 0 . . . 1.02 68.36 15 5.74 Yes 16 1.1 Yes 0 0 No -28 0.45 No 42 92.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68740220 + NM_133509 RAD51B 0 . . . 2.82 67.56 30 6.78 Yes 35 0.83 Yes 0 0 No -29 0.84 Yes 49 89.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59813588 - NM_032043 BRIP1 0 . . . 3.48 81.13 20 4.44 No 3 0.89 Yes 0 0 No -24 0.53 No 42 86.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68325502 + NM_133509 RAD51B 0 . . . 7.33 79.7 16 5.07 No 20 0.37 No 0 0 No -20 0.82 Yes 38 92.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48021861 + NM_000179 MSH6 0 . . . 3.77 70.73 24 5.39 No 60 -2.35 No 0 0 No -23 0.85 Yes 49 93.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68458260 + NM_133509 RAD51B 0 . . . 6.56 81.23 10 3.68 No 56 -4.5 No 0 0 No -32 0.74 Yes 44 53.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68457056 + NM_133509 RAD51B 0 . . . 0.8 58.8 38 6.87 Yes -3 0.91 Yes 0 0 No -22 0.65 No 29 55.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89639945 + NM_000314 PTEN 0 . . . 5.65 72.44 17 4.99 No 57 0.59 No 0 0 No -16 0.36 No 37 66.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215591923 - NM_000465 BARD1 0 . . . 4.92 82.48 18 4.9 No 11 0.77 No 0 0 No -26 0.64 No 47 58.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68300437 + NM_133509 RAD51B 0 . . . 8.56 88.27 57 6.35 Yes -2 0.26 No 0 0 No -21 0.49 No 32 79.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59800329 - NM_032043 BRIP1 0 . . . 2.54 0 31 4.09 No 12 0.52 No 0 0 No -26 0.43 No 46 73.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41017721 + NM_001164269 RAD51 0 . . . 4.82 70.52 15 4.6 No 15 0.7 No 0 0 No -38 0.35 No 43 91.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69074325 + NM_133509 RAD51B 0 . . . 7.56 81.37 29 5.69 Yes 76 1.17 Yes 0 0 No -31 0.71 Yes 42 73.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75481752 - NM_001040108 MLH3 0 . . . 6.49 72.78 23 5.83 Yes 2 1.15 Yes 0 0 No -22 0.74 Yes 39 79.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190734514 + NM_000534 PMS1 0 . . . 1.79 69.25 13 4.8 No 58 -3.88 No 0 0 No -51 0.45 No 53 48.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37090894 + NM_000249 MLH1 0 . . . 6.02 83.02 23 4.55 No 38 1.29 Yes 0 0 No -22 0.74 Yes 42 77.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68956690 + NM_133509 RAD51B 0 . . . 0.7 65.14 17 5.83 Yes 25 0.39 No 0 0 No -27 0.47 No 56 34.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108223350 + NM_000051 ATM 0 . . . 1.15 69.28 27 5.2 No 57 -2.92 No 0 0 No -26 0.63 No 35 71.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68857597 + NM_133509 RAD51B 0 . . . 0.52 0 30 5.46 No 64 -4.32 No 0 0 No -27 0.62 No 53 41.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68659952 + NM_133509 RAD51B 0 . . . 0.58 72.17 21 5.29 No 73 0.24 No 0 0 No -24 0.48 No 39 87.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68324829 + NM_133509 RAD51B 0 . . . 0.09 0 15 4.58 No 65 -3.83 No 0 0 No -18 0.46 No 55 59.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131897479 + NM_005732 RAD50 0 . . . 2.95 81.01 26 5.48 No 39 1.1 Yes 0 0 No -25 0.91 Yes 45 70.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68778746 + NM_004360 CDH1 0 . . . 3.71 71.73 15 4.36 No 65 -4.4 No 0 0 No -24 0.21 No 44 60.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48024088 + NM_000179 MSH6 0 . . . 1.83 77.77 23 4.69 No 68 -5.64 No 0 0 No -19 0.7 Yes 43 59.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69119084 + NM_133509 RAD51B 0 . . . 6.39 0 25 5.48 No 21 1.98 Yes 0 0 No -24 0.59 No 37 85.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41265928 - NM_007294 BRCA1 0 . . . 4.39 85.02 31 5.21 No 4 1.07 Yes 0 0 No -30 0.64 No 54 70.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68914347 + NM_133509 RAD51B 0 . . . 2.79 77.7 26 5.2 No 10 0.48 No 0 0 No -25 0.94 Yes 42 88.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104180747 - NM_001100119 XRCC3 0 . . . 3.43 77.82 66 8.1 Yes 3 -0.67 No 0 0 No -30 0.52 No 55 57.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69025382 + NM_133509 RAD51B 0 . . . 2.83 73.1 24 6.39 Yes 61 0.89 Yes 0 0 No -23 0.74 Yes 43 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59813099 - NM_032043 BRIP1 0 . . . 2.09 72.8 21 6.54 Yes 38 1.44 Yes 0 0 No -31 0.72 Yes 44 73.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48021055 + NM_000179 MSH6 0 . . . 5.43 79.49 13 4.14 No 8 1.03 Yes 0 0 No -42 0.66 No 50 81.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59866429 - NM_032043 BRIP1 0 . . . 3.91 81.04 42 6.04 Yes 39 1.25 Yes 0 0 No -22 0.42 No 19 89.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104162305 - NM_001100119 XRCC3 0 . . . 8.46 82.99 28 4.46 No 70 1.29 Yes 0 0 No -28 0.22 No 50 71.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29123593 - NM_001005735 CHEK2 0 . . . 8.05 86.54 22 4.41 No 23 1.32 Yes 0 0 No -34 0.83 Yes 41 92.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59832308 - NM_032043 BRIP1 0 . . . 3.7 82.58 42 4.18 No 23 1.02 Yes 0 0 No -41 0.6 No 35 54.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47769122 + NM_000251 MSH2 0 . . . 5.44 85.22 30 5.67 Yes 7 1 Yes 0 0 No -29 0.61 No 51 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190653988 + NM_000534 PMS1 0 . . . 6.72 86.89 30 5.65 Yes 64 0.65 No 0 0 No -60 0.41 No 42 73.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89658700 + NM_000314 PTEN 0 . . . 6.96 86.96 17 5.54 No 32 0.18 No 0 0 No -30 0.52 No 51 73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68301724 + NM_133509 RAD51B 0 . . . 2.93 67.17 12 5.18 No -4 0.24 No 0 0 No -26 0.8 Yes 43 31.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68974337 + NM_133509 RAD51B 0 . . . 4.28 78.71 21 4.89 No -2 0.4 No 0 0 No -20 0.75 Yes 40 78.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131958570 + NM_005732 RAD50 0 . . . 0.32 69.29 25 5.29 No 43 1.58 Yes 0 0 No -24 0.94 Yes 41 90.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41249375 - NM_007294 BRCA1 0 . . . 2.24 74.61 40 5.84 Yes 26 0.39 No 0 0 No -25 0.77 Yes 45 68.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108201943 + NM_000051 ATM 0 . . . 0.1 0 24 6.04 Yes 57 0.5 No 0 0 No -23 0.82 Yes 44 48.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90983822 - NM_002485 NBN 0 . . . 3.88 87.41 31 3.84 No 39 1.13 Yes 0 0 No -25 0.8 Yes 35 75.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215647544 - NM_000465 BARD1 0 . . . 4.58 74.24 19 5.64 Yes 41 0.35 No 0 0 No -27 0.66 Yes 17 68.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59918820 - NM_032043 BRIP1 0 . . . 1.87 64.4 20 4.13 No 43 1.08 Yes 0 0 No -25 0.58 No 35 94.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94186392 - NM_005591 MRE11 0 . . . 4.39 78.64 33 6.53 Yes 64 -5.25 No 0 0 No -32 0.29 No 49 43.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848582 - NM_032043 BRIP1 0 . . . 8.16 82.55 29 4.64 No 5 1.68 Yes 0 0 No -24 0.4 No 49 58.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59800946 - NM_032043 BRIP1 0 . . . 4.21 63.35 15 4.97 No 7 0.88 Yes 0 0 No -23 0.23 No 37 75.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68669283 + NM_133509 RAD51B 0 . . . 3.93 71.87 23 4.89 No 53 0.62 No 0 0 No -22 0.91 Yes 37 89.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68591824 + NM_133509 RAD51B 0 . . . 0.62 72.66 20 5.92 Yes -2 0.61 No 0 0 No -19 0.68 Yes 40 64.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68826177 + NM_004360 CDH1 0 . . . 3.89 84.17 57 7.98 Yes 33 2.21 Yes 0 0 No -26 0.48 No 25 76.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108182535 + NM_000051 ATM 0 . . . 2.56 79.45 14 5 No 27 0.19 No 0 0 No -24 0.39 No 28 47.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108163734 + NM_000051 ATM 0 . . . 1.46 64.92 17 4.8 No 15 0.29 No 0 0 No -25 0.79 Yes 40 27.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59916163 - NM_032043 BRIP1 0 . . . 7.26 85.42 16 4.67 No 61 -4.18 No 0 0 No -20 0.66 No 43 44.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108200212 + NM_000051 ATM 0 . . . 3.1 79.94 26 4.31 No 36 1.46 Yes 0 0 No -25 0.74 Yes 46 86.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68396807 + NM_133509 RAD51B 0 . . . 10.53 88.84 28 5.29 No 59 1.56 Yes 0 0 No -27 0.9 Yes 43 97.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47647709 + NM_000251 MSH2 0 . . . 1.53 78.1 16 5.08 No 72 0.97 Yes 0 0 No -19 0.47 No 27 72.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40992404 + NM_001164269 RAD51 0 . . . 0.39 77.65 17 4.58 No 7 2.02 Yes 0 0 No -23 0.35 No 43 87.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68566427 + NM_133509 RAD51B 0 . . . 6.6 82.72 39 6.15 Yes 32 -0.77 No 0 0 No -24 0.53 No 39 48.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41250179 - NM_007294 BRCA1 0 . . . 3.8 70.58 36 6.08 Yes 21 -3.37 No 0 0 No -35 0.77 Yes 20 47.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68440301 + NM_133509 RAD51B 0 . . . 2.91 68.43 16 4.63 No 48 -3.91 No 0 0 No -20 0.56 No 11 11.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68996912 + NM_133509 RAD51B 0 . . . 1.51 76.12 29 4.87 No 66 0.74 No 0 0 No -44 0.73 Yes 54 90.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69035692 + NM_133509 RAD51B 0 . . . 2.88 65.64 15 4.56 No 12 -1.48 No 0 0 No -24 0.46 No 46 73.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68373893 + NM_133509 RAD51B 0 . . . 6.65 85.56 22 7.62 Yes 1 0.28 No 0 0 No -30 0.76 Yes 44 78.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47721796 + NM_000251 MSH2 0 . . . 10.06 92.87 17 5.08 No 11 0.79 Yes 0 0 No -22 0.59 No 47 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59818843 - NM_032043 BRIP1 0 . . . 2.24 71.66 40 6.65 Yes 49 0.68 No 0 0 No -27 0.33 No 35 59.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37074428 + NM_000249 MLH1 0 . . . 2.74 71.1 10 3.58 No 65 1.65 Yes 0 0 No -37 0.49 No 48 84.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68376784 + NM_133509 RAD51B 0 . . . 4.78 62.04 26 6.43 Yes 66 0.94 Yes 0 0 No -35 0.48 No 44 61.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47714982 + NM_000251 MSH2 0 . . . 3.39 64.54 40 6.63 Yes 31 -2.69 No 0 0 No -25 0.47 No 49 71.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131973340 + NM_005732 RAD50 0 . . . 2.2 83.16 28 4.06 No 33 1.13 Yes 0 0 No -27 0.64 No 50 63.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105194330 + NM_021930 RINT1 0 . . . 1.71 71.35 23 6.29 Yes 52 0.91 Yes 0 0 No -35 0.63 No 48 81.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69122333 + NM_133509 RAD51B 0 . . . 4.29 76.1 59 7.73 Yes -4 1.22 Yes 0 0 No -40 0.63 No 46 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68646674 + NM_133509 RAD51B 0 . . . 4.14 77.45 15 5.62 Yes 55 -4.88 No 0 0 No -25 0.87 Yes 48 76.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68811753 + NM_133509 RAD51B 0 . . . 5.34 87.79 19 7.07 Yes 45 1.33 Yes 0 0 No -18 0.48 No 50 81.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32898734 + NM_000059 BRCA2 0 . . . 2.07 71.74 26 5.25 No 25 -3.46 No 0 0 No -26 0.74 Yes 45 75.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94148939 - NM_005591 MRE11 0 . . . 1.77 69.01 22 5.09 No 44 0.48 No 0 0 No -54 0.29 No 55 55.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6018662 - NM_000535 PMS2 0 . . . 4.16 85.02 57 8.28 Yes 4 1.24 Yes 0 0 No -27 0.77 Yes 54 60.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215596193 - NM_000465 BARD1 0 . . . 1.57 80.27 14 5.18 No 9 -2.5 No 0 0 No -48 0.64 No 43 64.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68510333 + NM_133509 RAD51B 0 . . . 3 75.03 16 4.12 No 4 0.16 No 0 0 No -34 0.56 No 32 52.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89668440 + NM_000314 PTEN 0 . . . 1.95 70.46 21 6.93 Yes 59 -3.94 No 0 0 No -20 0.81 Yes 49 71.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131899770 + NM_005732 RAD50 0 . . . 4.26 83.72 30 5.48 No 66 0.71 No 0 0 No -25 0.83 Yes 45 70.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29127423 - NM_001005735 CHEK2 0 . . . 5.04 81.32 19 4.78 No 5 0.89 Yes 0 0 No -51 0.81 Yes 53 83.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68291494 + NM_133509 RAD51B 0 . . . 0.6 0 34 7.52 Yes 1 0.85 Yes 0 0 No -28 0.69 Yes 36 45.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1219520 + NM_000455 STK11 0 . . . 0.91 73.94 14 3.32 No 6 1.12 Yes 0 0 No -31 0.6 No 39 61.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89641534 + NM_000314 PTEN 0 . . . 1.75 0 15 5.07 No 55 0.31 No 0 0 No -21 0.79 Yes 46 50.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69070757 + NM_133509 RAD51B 0 . . . 6.31 81.73 19 6 Yes 5 1.55 Yes 0 0 No -18 0.61 No 45 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69070308 + NM_133509 RAD51B 0 . . . 0.17 69.64 30 5.48 No 40 1.03 Yes 0 0 No -30 0.33 No 18 76.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75493100 - NM_001040108 MLH3 0 . . . 5.92 68.87 29 5.82 Yes 45 1.29 Yes 0 0 No -28 0.82 Yes 33 61.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47751968 + NM_000251 MSH2 0 . . . 7.32 76.73 22 4.8 No 8 1.83 Yes 0 0 No -21 0.94 Yes 50 83.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68699808 + NM_133509 RAD51B 0 . . . 5.71 78.35 23 5.77 Yes 27 0.86 Yes 0 0 No -22 0.74 Yes 44 67.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94159518 - NM_005591 MRE11 0 . . . 0.59 68.26 17 4.8 No 24 0.82 Yes 0 0 No -21 0.54 No 47 79.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29104411 - NM_001005735 CHEK2 0 . . . 1.76 77.4 23 5.38 No 65 2.55 Yes 0 0 No -30 0.71 Yes 46 32.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131978180 + NM_005732 RAD50 0 . . . 1.36 71.45 30 5.39 No 37 -1.66 No 0 0 No -29 0.6 No 30 46.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23614839 - NM_024675 PALB2 0 . . . 2.16 70.14 23 5.29 No 24 1.66 Yes 0 0 No -22 0.62 No 34 85.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68821138 + NM_133509 RAD51B 0 . . . 1.05 72.33 34 6.15 Yes 27 0.95 Yes 0 0 No -33 0.55 No 48 33.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215606734 - NM_000465 BARD1 0 . . . 2.61 57.49 23 5.39 No 20 1.15 Yes 0 0 No -22 0.89 Yes 38 73.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29102740 - NM_001005735 CHEK2 0 . . . 2.24 80.12 23 5.38 No 7 1.02 Yes 0 0 No -25 0.53 No 46 88.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68715652 + NM_133509 RAD51B 0 . . . 6.68 81.69 19 4.66 No 48 -2.09 No 0 0 No -18 0.84 Yes 47 76.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59865057 - NM_032043 BRIP1 0 . . . 1.35 75.86 15 4.58 No 62 -4.66 No 0 0 No -18 0.78 Yes 48 55.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89724541 + NM_000314 PTEN 0 . . . 0.96 77.27 21 5.92 Yes 59 0.59 No 0 0 No -20 0.94 Yes 54 73.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69049938 + NM_133509 RAD51B 0 . . . 1.14 70.72 61 8.65 Yes 70 -2.56 No 0 0 No -35 0.49 No 64 36.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23651181 - NM_024675 PALB2 0 . . . 0.48 61.94 72 7.18 Yes 40 0.22 No 0 0 No -35 0.66 No 50 95.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68350288 + NM_133509 RAD51B 0 . . . 9.71 80.11 15 4.58 No 53 0.63 No 0 0 No -43 0.72 Yes 41 62.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68292565 + NM_133509 RAD51B 0 . . . 1.08 84.22 23 5.16 No 33 1.14 Yes 0 0 No -23 0.47 No 25 52.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69063802 + NM_133509 RAD51B 0 . . . 4.26 87.63 14 7.94 Yes 15 -1.68 No 0 0 No -25 0.76 Yes 51 52.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68786448 + NM_004360 CDH1 0 . . . 1.12 83.11 16 4.85 No 73 -6.5 No 0 0 No -20 0.66 No 52 75.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68374056 + NM_133509 RAD51B 0 . . . 0.14 72.9 21 4.79 No 4 -2.24 No 0 0 No -20 0.83 Yes 49 78.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108119164 + NM_000051 ATM 0 . . . 2.47 74.63 43 7.28 Yes 5 1.24 Yes 0 0 No -42 0.6 No 38 89.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131903881 + NM_005732 RAD50 0 . . . 1.79 87 36 6.63 Yes 76 1.53 Yes 0 0 No -35 0.61 No 50 78.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68456682 + NM_133509 RAD51B 0 . . . 4.29 71.81 27 5.51 No 40 1.19 Yes 0 0 No -34 0.65 No 43 54.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190711903 + NM_000534 PMS1 0 . . . 0.68 0 14 3.87 No 75 1.69 Yes 0 0 No -20 0.48 No 42 73.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41005007 + NM_001164269 RAD51 0 . . . 1 0 32 5.68 Yes 19 0.49 No 0 0 No -28 0.45 No 39 49.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108139868 + NM_000051 ATM 0 . . . 6.31 85.92 15 5.11 No 6 0.96 Yes 0 0 No -20 0.66 No 45 68.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68902733 + NM_133509 RAD51B 0 . . . 2.11 70.57 34 6.32 Yes 21 0.62 No 0 0 No -34 0.59 No 37 77.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108118850 + NM_000051 ATM 0 . . . 2.02 67.65 15 4.96 No 22 0.81 Yes 0 0 No -23 0.79 Yes 44 74.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68827683 + NM_133509 RAD51B 0 . . . 2.49 0 24 4.9 No 31 0.24 No 0 0 No -55 0.55 No 49 75.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131910282 + NM_005732 RAD50 0 . . . 6.59 76.18 17 4.69 No 25 1.1 Yes 0 0 No -20 0.35 No 33 94.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68922317 + NM_133509 RAD51B 0 . . . 0.36 61.05 19 6.3 Yes 59 0.98 Yes 0 0 No -31 0.55 No 42 34.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89680049 + NM_000314 PTEN 0 . . . 5.99 82.24 35 4.56 No 3 1.21 Yes 0 0 No -30 0.28 No 36 53.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56811697 + NM_058216 RAD51C 0 . . . 0.94 65.73 53 5.28 No 27 -3.04 No 0 0 No -26 0.58 No 46 39.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47715062 + NM_000251 MSH2 0 . . . 6.83 92.66 27 6.51 Yes 5 0.52 No 0 0 No -26 0.83 Yes 49 68.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47788190 + NM_000251 MSH2 0 . . . 0.43 74.93 24 4.8 No 4 0.36 No 0 0 No -23 0.93 Yes 54 57.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68708825 + NM_133509 RAD51B 0 . . . 6.49 85.57 25 5.57 Yes 63 1.39 Yes 0 0 No -24 0.69 Yes 44 54.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68805747 + NM_004360 CDH1 0 . . . 5.03 74.02 18 6.63 Yes 21 0.72 No 0 0 No -17 0.46 No 37 78.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45795804 - NM_001048171 MUTYH 0 . . . 1.82 83.64 17 5.89 Yes 74 1.4 Yes 0 0 No -21 0.66 Yes 46 36.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68423736 + NM_133509 RAD51B 0 . . . 0.26 0 21 4.04 No 67 0.5 No 0 0 No -25 0.66 No 24 64.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68903822 + NM_133509 RAD51B 0 . . . 4.71 79.72 14 4.33 No 24 0.19 No 0 0 No -19 0.72 Yes 34 65.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152350263 - NM_005431 XRCC2 0 . . . 0.79 67.18 26 5.01 No -4 -0.66 No 0 0 No -25 0.88 Yes 46 30.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47668205 + NM_000251 MSH2 0 . . . 3.68 70.85 31 5.25 No 23 0.68 No 0 0 No -30 0.61 No 40 91.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56775467 + NM_058216 RAD51C 0 . . . 5.43 88.68 15 4.58 No 9 1.13 Yes 0 0 No -20 0.25 No 49 95.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59787488 - NM_032043 BRIP1 0 . . . 8.07 89.86 28 5.29 No 33 0.58 No 0 0 No -27 0.82 Yes 50 66.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69067119 + NM_133509 RAD51B 0 . . . 6.63 72.94 39 5.56 Yes 14 0.45 No 0 0 No -44 0.62 No 44 85.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47741496 + NM_000251 MSH2 0 . . . 3.17 0 28 5.38 No 29 0.06 No 0 0 No -27 0.44 No 44 87.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41209752 - NM_007294 BRCA1 0 . . . 4.42 84.22 10 3.53 No 33 1.44 Yes 0 0 No -47 0.53 No 50 86.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6010421 - NM_000535 PMS2 0 . . . 9.87 83.65 25 7.69 Yes 64 -3.11 No 0 0 No -25 0.59 No 49 75.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89658713 + NM_000314 PTEN 0 . . . 0.21 66.78 15 5.39 No 45 0.18 No 0 0 No -24 0.41 No 38 58.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41245374 - NM_007294 BRCA1 0 . . . 2.02 75.33 16 5.83 Yes 56 0.37 No 0 0 No -27 0.33 No 50 91.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190731729 + NM_000534 PMS1 0 . . . 0.12 0 18 6.04 Yes 65 -4.23 No 0 0 No -24 0.71 Yes 32 47.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68976716 + NM_133509 RAD51B 0 . . . 6.23 90.64 17 4.77 No 25 0.89 Yes 0 0 No -16 0.43 No 54 49.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68813883 + NM_004360 CDH1 0 . . . 6.53 87.77 30 5.91 Yes 37 0.89 Yes 0 0 No -33 0.44 No 47 68.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215664968 - NM_000465 BARD1 0 . . . 4.46 62.53 17 6.93 Yes 58 1.29 Yes 0 0 No -28 0.67 Yes 38 32.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94228190 - NM_005591 MRE11 0 . . . 2.25 0 22 5.87 Yes 20 0.5 No 0 0 No -21 0.93 Yes 38 68.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29132818 - NM_001005735 CHEK2 0 . . . 3.24 70.31 18 4.24 No 45 0.94 Yes 0 0 No -41 0.89 Yes 38 74.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32949881 + NM_000059 BRCA2 0 . . . 1.87 80.12 22 5.29 No 6 1.13 Yes 0 0 No -21 0.6 No 52 66.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41021871 + NM_001164269 RAD51 0 . . . 1.28 79.76 16 5.52 No 29 -1.79 No 0 0 No -24 0.81 Yes 49 42.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68629839 + NM_133509 RAD51B 0 . . . 1.06 0 24 4.9 No 73 0.75 No 0 0 No -17 0.38 No 57 29.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108110810 + NM_000051 ATM 0 . . . 2.13 83.68 30 5.31 No 24 -1.14 No 0 0 No -29 0.9 Yes 44 61.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68779728 + NM_133509 RAD51B 0 . . . 4.21 83.68 17 5.57 Yes -4 0.53 No 0 0 No -16 0.59 No 51 67.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1208107 + NM_000455 STK11 0 . . . 5.24 75.05 27 5.09 No 18 0.53 No 0 0 No -26 0.83 Yes 39 75.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215600986 - NM_000465 BARD1 0 . . . 2.55 72.55 35 6.37 Yes 40 1.5 Yes 0 0 No -34 0.84 Yes 40 59.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59915056 - NM_032043 BRIP1 0 . . . 0.17 0 41 7.14 Yes 47 0.34 No 0 0 No -40 0.64 No 45 54.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29106818 - NM_001005735 CHEK2 0 . . . 7.08 80.57 17 4.8 No 4 1.41 Yes 0 0 No -38 0.59 No 45 73.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68787511 + NM_133509 RAD51B 0 . . . 5.57 75.32 29 5.56 Yes 27 0.12 No 0 0 No -28 0.84 Yes 36 65.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68772791 + NM_133509 RAD51B 0 . . . 6.24 67.71 32 5.81 Yes 29 1.78 Yes 0 0 No -26 0.56 No 29 93.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69104758 + NM_133509 RAD51B 0 . . . 6.43 77.27 32 5.26 No 8 0.52 No 0 0 No -31 0.56 No 46 88.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68865464 + NM_004360 CDH1 0 . . . 0.74 82.09 44 7.42 Yes 40 1.71 Yes 0 0 No -31 0.67 Yes 42 67.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40999686 + NM_001164269 RAD51 0 . . . 3.6 85.02 13 4.36 No 4 1.05 Yes 0 0 No -27 0.37 No 54 71.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33444646 - NM_002878 RAD51D 0 . . . 0.36 61.05 23 5.35 No 50 0.26 No 0 0 No -22 0.54 No 42 24.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56772625 + NM_058216 RAD51C 0 . . . 4.67 83.15 12 5.66 Yes 60 0.25 No 0 0 No -35 0.69 Yes 44 35.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89655359 + NM_000314 PTEN 0 . . . 0.51 0 17 6.19 Yes 9 0.14 No 0 0 No -28 0.57 No 42 47.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68449282 + NM_133509 RAD51B 0 . . . 2.77 73.22 22 5.18 No 5 0.18 No 0 0 No -20 0.91 Yes 47 67.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59838654 - NM_032043 BRIP1 0 . . . 0 58.28 15 5 No 26 0.28 No 0 0 No -18 0.45 No 32 61.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68385045 + NM_133509 RAD51B 0 . . . 7.53 87.51 25 5.57 Yes 51 1.47 Yes 0 0 No -24 0.63 No 50 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215662050 - NM_000465 BARD1 0 . . . 2.66 72.45 23 5.09 No 13 -2.28 No 0 0 No -58 0.57 No 40 76.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59823431 - NM_032043 BRIP1 0 . . . 1.76 60.04 17 5.57 Yes 12 0.38 No 0 0 No -30 0.6 No 38 51.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104162123 - NM_001100119 XRCC3 0 . . . 4.25 66.38 14 5.33 No 56 0.76 No 0 0 No -23 0.64 No 33 91.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41221510 - NM_007294 BRCA1 0 . . . 1.35 0 18 6.16 Yes 68 0.53 No 0 0 No -24 0.31 No 38 68.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89671619 + NM_000314 PTEN 0 . . . 8.2 90.25 17 4.8 No 40 1.24 Yes 0 0 No -20 0.55 No 49 60.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94172830 - NM_005591 MRE11 0 . . . 1.16 66.35 22 4.01 No 70 0.6 No 0 0 No -26 0.64 No 47 68.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94188351 - NM_005591 MRE11 0 . . . 1.97 0 13 4.36 No 1 0.87 Yes 0 0 No -27 0.42 No 57 74.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68513247 + NM_133509 RAD51B 0 . . . 1.23 82.27 48 7.35 Yes 44 -2.48 No 0 0 No -47 0.44 No 55 31.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68794586 + NM_004360 CDH1 0 . . . 7.61 74.88 25 4.37 No 14 0.57 No 0 0 No -24 0.7 Yes 44 93.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47729396 + NM_000251 MSH2 0 . . . 2.89 73.47 15 4.99 No 35 1.91 Yes 0 0 No -23 0.32 No 48 81.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68880228 + NM_133509 RAD51B 0 . . . 0.03 60.85 85 9.22 Yes 32 0.28 No 0 0 No -24 0.61 No 53 31.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90960328 - NM_002485 NBN 0 . . . 4.77 80.15 14 7.03 Yes -3 0.6 No 0 0 No -30 0.76 Yes 38 64.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69145545 + NM_133509 RAD51B 0 . . . 0.67 60.02 23 5.79 Yes 72 -1.72 No 0 0 No -27 0.71 Yes 43 68.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69132721 + NM_133509 RAD51B 0 . . . 4.14 0 25 4.95 No 43 -4.99 No 0 0 No -24 0.69 Yes 56 49.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47790366 + NM_000251 MSH2 0 . . . 8.84 86.48 29 4.86 No 9 1.31 Yes 0 0 No -28 0.52 No 49 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59915743 - NM_032043 BRIP1 0 . . . 4.72 85.22 17 6.93 Yes 4 1.05 Yes 0 0 No -27 0.52 No 54 56.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69039907 + NM_133509 RAD51B 0 . . . 5.89 78.76 15 5.54 No 1 1.68 Yes 0 0 No -15 0.63 No 50 67.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47800233 + NM_000251 MSH2 0 . . . 0.63 0 25 7.45 Yes 75 0.45 No 0 0 No -24 0.54 No 34 59.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59847426 - NM_032043 BRIP1 0 . . . 6.35 86.96 26 5.23 No 40 0.73 No 0 0 No -25 0.85 Yes 50 51.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68653189 + NM_133509 RAD51B 0 . . . 1.67 68.99 36 7.47 Yes 52 -4.62 No 0 0 No -35 0.33 No 48 67.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41217440 - NM_007294 BRCA1 0 . . . 2.25 68.34 41 7.7 Yes 13 0.84 Yes 0 0 No -40 0.63 No 45 72.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68614620 + NM_133509 RAD51B 0 . . . 3.86 67.78 42 8.77 Yes 17 0.62 No 0 0 No -41 0.8 Yes 49 62.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75509834 - NM_001040108 MLH3 0 . . . 7.35 80.82 61 7.73 Yes 58 0.67 No 0 0 No -23 0.72 Yes 42 71.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32915295 + NM_000059 BRCA2 0 . . . 2.28 70.72 13 4.18 No 61 0.13 No 0 0 No -50 0.45 No 45 45.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33429888 - NM_002878 RAD51D 0 . . . 5.81 88.47 29 5.56 Yes 24 1.7 Yes 0 0 No -20 0.32 No 45 61.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90996920 - NM_002485 NBN 0 . . . 3.17 73.61 70 8.76 Yes 65 -1.07 No 24 0.51 Yes -28 0.41 No 45 32.24 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 108192203 + NM_000051 ATM 0 . . . 5.21 73.8 29 5.56 Yes 28 0.85 Yes 0 0 No -28 0.78 Yes 44 59.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68731963 + NM_133509 RAD51B 0 . . . 6.99 78.43 34 5.69 Yes 67 -5.69 No 0 0 No -31 0.55 No 43 54.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68524954 + NM_133509 RAD51B 0 . . . 3.55 74.45 21 5.56 Yes 20 0.68 No 0 0 No -20 0.72 Yes 38 63.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68697227 + NM_133509 RAD51B 0 . . . 0.76 69.53 11 4.12 No 41 0.67 No 0 0 No -40 0.58 No 45 41.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68887210 + NM_133509 RAD51B 0 . . . 1.4 80.88 22 5.29 No 25 0.41 No 0 0 No -21 0.78 Yes 52 87.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68301875 + NM_133509 RAD51B 0 . . . 2.89 66.8 23 6 Yes 29 1.6 Yes 0 0 No -22 0.82 Yes 29 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41248883 - NM_007294 BRCA1 0 . . . 6.9 74.19 25 5.57 Yes 31 0.73 No 0 0 No -26 0.43 No 46 53.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69097287 + NM_133509 RAD51B 0 . . . 0.04 60.78 14 5.27 No 0 0.14 No 0 0 No -23 0.25 No 46 76.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47729066 + NM_000251 MSH2 0 . . . 7.32 90.27 22 3.81 No 32 1.29 Yes 0 0 No -28 0.49 No 45 87.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69041861 + NM_133509 RAD51B 0 . . . 0.3 0 19 6.08 Yes 53 -1.03 No 0 0 No -30 0.59 No 15 48.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215653607 - NM_000465 BARD1 0 . . . 1.61 83.19 18 3.71 No 4 0.2 No 0 0 No -25 0.39 No 50 64.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29138687 - NM_001005735 CHEK2 0 . . . 0.89 0 25 5.52 No 20 1.78 Yes 0 0 No -24 0.45 No 38 53.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131934563 + NM_005732 RAD50 0 . . . 5.43 77.42 10 4 No 11 1.67 Yes 0 0 No -34 0.6 No 47 96.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23614903 - NM_024675 PALB2 0 . . . 2.69 79.67 20 5.82 Yes 1 0.76 No 0 0 No -20 0.8 Yes 46 72.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68737227 + NM_133509 RAD51B 0 . . . 1.88 58.37 22 5.99 Yes 32 0.57 No 0 0 No -27 0.49 No 37 47.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59885440 - NM_032043 BRIP1 0 . . . 0.59 67.03 15 5 No 26 0.35 No 0 0 No -22 0.72 Yes 32 71.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68771005 + NM_004360 CDH1 0 . . . 1 65.35 31 5.92 Yes -2 0.71 No 0 0 No -30 0.79 Yes 50 44.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68997807 + NM_133509 RAD51B 0 . . . 3.38 74.07 28 5.82 Yes 76 -5.64 No 0 0 No -27 0.53 No 58 12.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68315957 + NM_133509 RAD51B 0 . . . 1.33 71.7 24 5.22 No 6 0.76 No 0 0 No -23 0.86 Yes 30 72.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190689722 + NM_000534 PMS1 0 . . . 6.59 83.14 22 4.2 No 65 0.51 No 0 0 No -26 0.87 Yes 47 76.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108239879 + NM_000051 ATM 0 . . . 9 84.47 18 4.86 No 27 1.01 Yes 0 0 No -24 0.66 No 40 57.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90977733 - NM_002485 NBN 0 . . . 0.75 0 16 4.91 No 45 0.05 No 0 0 No -21 0.48 No 48 40.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1213571 + NM_000455 STK11 0 . . . 3.33 76.96 14 4.17 No 58 -1.12 No 0 0 No -53 0.82 Yes 49 93.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69072293 + NM_133509 RAD51B 0 . . . 1.51 0 30 5.14 No 52 -2.37 No 0 0 No -24 0.5 No 47 46.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41255957 - NM_007294 BRCA1 0 . . . 2.24 80.12 16 4.21 No 7 1.16 Yes 0 0 No -35 0.75 Yes 51 76.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105199484 + NM_021930 RINT1 0 . . . 3.52 87.71 9 5.29 No 8 0.55 No 0 0 No -21 0.61 No 50 61.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90973480 - NM_002485 NBN 0 . . . 2.48 85.87 31 7 Yes 50 0.1 No 0 0 No -27 0.49 No 51 85.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108153351 + NM_000051 ATM 0 . . . 7.6 80.36 12 4.8 No 2 0.33 No 0 0 No -43 0.79 Yes 41 51.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47782509 + NM_000251 MSH2 0 . . . 4.02 79.24 35 5.6 Yes 37 0.47 No 0 0 No -29 0.41 No 48 59.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68546982 + NM_133509 RAD51B 0 . . . 8.19 88.38 20 5.57 Yes 36 -2.62 No 0 0 No -19 0.67 Yes 46 54.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29131226 - NM_001005735 CHEK2 0 . . . 3.25 80.12 28 5.55 No 8 1.2 Yes 0 0 No -27 0.84 Yes 50 86.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68743990 + NM_133509 RAD51B 0 . . . 2.02 70.37 30 8.27 Yes 4 1.56 Yes 0 0 No -38 0.52 No 54 68.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32974856 + NM_000059 BRCA2 0 . . . 0.81 70.31 39 6.58 Yes 43 -4.15 No 0 0 No -22 0.8 Yes 46 43.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108147950 + NM_000051 ATM 0 . . . 3 66.87 26 5.36 No 15 0.65 No 0 0 No -25 0.91 Yes 43 70.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215619053 - NM_000465 BARD1 0 . . . 6.42 80.37 14 5.38 No 13 1 Yes 0 0 No -26 0.46 No 26 68.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68705205 + NM_133509 RAD51B 0 . . . 5.16 74.24 26 5.29 No 64 1.72 Yes 0 0 No -25 0.62 No 48 74.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68308374 + NM_133509 RAD51B 0 . . . 0.75 72.02 27 5.78 Yes -2 0.29 No 0 0 No -27 0.37 No 52 43.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21988592 - NM_000077 CDKN2A 0 . . . 4.38 72.32 32 5.74 Yes 13 1.61 Yes 0 0 No -46 0.32 No 45 94.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131937398 + NM_005732 RAD50 0 . . . 2.81 68.42 25 5.1 No 28 0.83 Yes 0 0 No -24 0.76 Yes 48 50.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94175617 - NM_005591 MRE11 0 . . . 3.55 71.38 17 4.8 No 73 0.68 No 0 0 No -31 0.31 No 25 78.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69081991 + NM_133509 RAD51B 0 . . . 6.11 81.47 21 4.15 No 26 1.12 Yes 0 0 No -20 0.74 Yes 32 57.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190673267 + NM_000534 PMS1 0 . . . 3.33 75.69 22 5.49 No 19 -3.36 No 0 0 No -27 0.5 No 13 41.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68315366 + NM_133509 RAD51B 0 . . . 3.67 75.77 24 6.16 Yes 24 0.82 Yes 0 0 No -24 0.54 No 42 60.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190649312 + NM_000534 PMS1 0 . . . 3.66 68.39 28 5.47 No 7 1.05 Yes 0 0 No -21 0.42 No 51 69.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190683282 + NM_000534 PMS1 0 . . . 1.71 73.06 28 5.83 Yes 34 0.92 Yes 0 0 No -27 0.76 Yes 44 64.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69005338 + NM_133509 RAD51B 0 . . . 0.82 73.67 15 4.58 No 30 -2.85 No 0 0 No -32 0.6 No 51 77.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90959855 - NM_002485 NBN 0 . . . 0.1 83.28 39 6.26 Yes 44 0.82 Yes 0 0 No -29 0.76 Yes 46 66.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47717620 + NM_000251 MSH2 0 . . . 1.9 75.88 10 4.57 No -2 0.96 Yes 0 0 No -48 0.63 No 49 70.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68425259 + NM_133509 RAD51B 0 . . . 0.66 68.26 14 5.84 Yes 49 -1.84 No 0 0 No -30 0.51 No 34 61.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215634695 - NM_000465 BARD1 0 . . . 1.75 65.23 15 4.58 No 51 0.92 Yes 0 0 No -24 0.7 Yes 39 84.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59779777 - NM_032043 BRIP1 0 . . . 0.24 0 36 7.45 Yes 2 0.28 No 0 0 No -25 0.54 No 49 67.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190691767 + NM_000534 PMS1 0 . . . 5.18 70.43 19 5.55 No 34 0.51 No 0 0 No -27 0.88 Yes 43 48.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68616533 + NM_133509 RAD51B 0 . . . 1.3 64.74 20 5.57 Yes 32 -2.86 No 0 0 No -19 0.7 Yes 41 51.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69040545 + NM_133509 RAD51B 0 . . . 5.47 0 17 4.8 No 72 -0.55 No 0 0 No -16 0.31 No 16 51.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40991576 + NM_001164269 RAD51 0 . . . 5.92 82.31 31 5.47 No 57 0.99 Yes 0 0 No -30 0.59 No 48 65.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68976465 + NM_133509 RAD51B 0 . . . 9.23 96.69 29 7.32 Yes 7 1.09 Yes 0 0 No -28 0.91 Yes 51 90.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59808434 - NM_032043 BRIP1 0 . . . 2.64 0 20 6.15 Yes 29 0.92 Yes 0 0 No -19 0.73 Yes 46 74.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59910155 - NM_032043 BRIP1 0 . . . 4.78 75.12 35 5.78 Yes 14 0.69 No 0 0 No -23 0.56 No 48 62.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68699504 + NM_133509 RAD51B 0 . . . 4.89 76.9 13 4.07 No 6 1.95 Yes 0 0 No -17 0.71 Yes 34 53.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68572741 + NM_133509 RAD51B 0 . . . 0.86 55.22 20 5.09 No 70 -4.55 No 0 0 No -40 0.37 No 41 73.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105183986 + NM_021930 RINT1 0 . . . 3.48 73.96 29 5.74 Yes 2 1.06 Yes 0 0 No -28 0.63 No 50 46.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90985919 - NM_002485 NBN 0 . . . 0.72 76.04 24 5.29 No -3 0.3 No 0 0 No -30 0.53 No 44 44.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68666227 + NM_133509 RAD51B 0 . . . 1.89 66 34 5.66 Yes 68 0.9 Yes 0 0 No -33 0.41 No 16 64.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47683274 + NM_000251 MSH2 0 . . . 8.04 79.76 31 5.47 No 14 0.56 No 0 0 No -30 0.8 Yes 45 56.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29090273 - NM_001005735 CHEK2 0 . . . 7.12 85.45 17 5.48 No 43 0.47 No 0 0 No -16 0.39 No 45 90.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89645034 + NM_000314 PTEN 0 . . . 5.53 90.13 35 5.19 No 5 0.13 No 0 0 No -34 0.54 No 53 53.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108177669 + NM_000051 ATM 0 . . . 0.65 58.54 29 6.44 Yes 42 1.51 Yes 0 0 No -28 0.67 Yes 33 47.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68765627 + NM_133509 RAD51B 0 . . . 0.5 59.11 34 7.23 Yes 1 0.05 No 0 0 No -33 0.83 Yes 38 57.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131918858 + NM_005732 RAD50 0 . . . 0.47 79.68 25 6.77 Yes 70 0.43 No 0 0 No -24 0.96 Yes 48 76.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68774126 + NM_133509 RAD51B 0 . . . 1.19 79.01 37 7.14 Yes 24 -1.76 No 0 0 No -23 0.6 No 52 44.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59801007 - NM_032043 BRIP1 0 . . . 2.13 62.13 28 5.69 Yes -3 0.4 No 0 0 No -27 0.97 Yes 57 39.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69005243 + NM_133509 RAD51B 0 . . . 5.16 75.92 61 5.75 Yes 10 0.4 No 0 0 No -20 0.29 No 42 78.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59764574 - NM_032043 BRIP1 0 . . . 3.13 84.79 38 6.52 Yes 48 1.28 Yes 0 0 No -37 0.59 No 18 84.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108190556 + NM_000051 ATM 0 . . . 5.18 58.68 35 7.26 Yes 57 0.88 Yes 0 0 No -34 0.89 Yes 38 91.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108196588 + NM_000051 ATM 0 . . . 0.27 65.32 21 4.48 No 38 0.56 No 0 0 No -25 0.48 No 54 36.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23612987 - NM_024675 PALB2 0 . . . 4.49 84.86 30 5.4 No 16 1.01 Yes 0 0 No -29 0.86 Yes 42 92.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68804878 + NM_133509 RAD51B 0 . . . 1.44 72.95 18 5.01 No 46 -4.89 No 0 0 No -27 0.81 Yes 44 62.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108096641 + NM_000051 ATM 0 . . . 0.15 68.21 18 5.1 No 75 0.13 No 0 0 No -24 0.51 No 26 44.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68451361 + NM_133509 RAD51B 0 . . . 0.34 0 32 6.16 Yes 15 1.29 Yes 0 0 No -31 0.73 Yes 43 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215617408 - NM_000465 BARD1 0 . . . 3.23 80.61 14 3.53 No 35 0.33 No 0 0 No -20 0.74 Yes 52 50.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84392013 - NM_139076 FAM175A 0 . . . 0.62 0 24 5.02 No 65 1.16 Yes 0 0 No -23 0.71 Yes 20 50.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41020176 + NM_001164269 RAD51 0 . . . 2.03 86.71 28 5.81 Yes 76 1.31 Yes 0 0 No -31 0.52 No 25 77.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131907624 + NM_005732 RAD50 0 . . . 3.01 70.21 23 5.39 No 15 0.69 No 0 0 No -55 0.9 Yes 43 74.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215654691 - NM_000465 BARD1 0 . . . 3.52 73 20 4.69 No -2 0.12 No 0 0 No -21 0.64 No 42 51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41000876 + NM_001164269 RAD51 0 . . . 5.83 91.19 19 5 No 52 1.41 Yes 0 0 No -37 0.73 Yes 49 94.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56810495 + NM_058216 RAD51C 0 . . . 0.78 84.22 22 4.58 No 33 1.11 Yes 0 0 No -25 0.66 No 51 55.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69063836 + NM_133509 RAD51B 0 . . . 0.65 67.75 14 4.47 No -4 0.54 No 0 0 No -30 0.56 No 45 34.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68707363 + NM_133509 RAD51B 0 . . . 3.71 79.27 11 4.7 No 27 2.04 Yes 0 0 No -52 0.35 No 41 75.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69028423 + NM_133509 RAD51B 0 . . . 0.14 0 81 7.52 Yes 72 -2.46 No 0 0 No -28 0.82 Yes 28 45.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47628574 + NM_000251 MSH2 0 . . . 4.99 80.12 24 5.29 No 10 1.15 Yes 0 0 No -21 0.35 No 48 88.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89678931 + NM_000314 PTEN 0 . . . 2.57 73.8 50 8.12 Yes 25 0.89 Yes 0 0 No -49 0.42 No 46 75.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69019001 + NM_133509 RAD51B 0 . . . 8.45 91.91 24 4.1 No -3 0.13 No 0 0 No -23 0.86 Yes 41 85.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68893643 + NM_133509 RAD51B 0 . . . 4.55 83.89 24 6.2 Yes -3 0.89 Yes 0 0 No -26 0.54 No 49 71.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40993617 + NM_001164269 RAD51 0 . . . 7.32 84.17 28 6.31 Yes NA NA NA 0 0 No -27 0.53 No 14 10.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59871203 - NM_032043 BRIP1 0 . . . 2.97 71.52 19 4.58 No 8 0.8 Yes 0 0 No -19 0.58 No 45 56.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89646228 + NM_000314 PTEN 0 . . . 3.75 84.96 29 6.32 Yes 8 0.64 No 0 0 No -28 0.57 No 50 93.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59937531 - NM_032043 BRIP1 0 . . . 7.24 91.15 17 6.47 Yes 7 1.03 Yes 0 0 No -29 0.39 No 41 68.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108171226 + NM_000051 ATM 0 . . . 1.82 68.44 9 5 No 32 0.5 No 0 0 No -26 0.73 Yes 47 62.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23626440 - NM_024675 PALB2 0 . . . 2.45 69.26 28 5.18 No 14 0.62 No 0 0 No -27 0.83 Yes 44 47.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68606008 + NM_133509 RAD51B 0 . . . 8.18 78.45 20 5.62 Yes 16 1.1 Yes 0 0 No -19 0.52 No 42 78.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29094753 - NM_001005735 CHEK2 0 . . . 0.49 65.5 14 4.47 No 74 0.56 No 0 0 No -19 0.74 Yes 36 31.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68771127 + NM_133509 RAD51B 0 . . . 0.87 63.93 14 4.65 No 56 0.16 No 0 0 No -23 0.62 No 48 42.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68989536 + NM_133509 RAD51B 0 . . . 2.84 73.97 22 4.52 No 10 -1.85 No 0 0 No -21 0.76 Yes 55 49.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108224038 + NM_000051 ATM 0 . . . 1.45 71.09 21 4.79 No 47 0.72 No 0 0 No -20 0.8 Yes 48 64.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68774933 + NM_133509 RAD51B 0 . . . 1.17 81.06 23 5.39 No 21 0.83 Yes 0 0 No -22 0.82 Yes 48 59.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47645785 + NM_000251 MSH2 0 . . . 0.19 0 29 7.18 Yes 38 1.07 Yes 0 0 No -28 0.86 Yes 51 58.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190702617 + NM_000534 PMS1 0 . . . 1.35 60.24 16 6.63 Yes 76 -5.74 No 0 0 No -26 0.64 No 50 69.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6011897 - NM_000535 PMS2 0 . . . 8.8 79.59 28 5.82 Yes 57 0.36 No 0 0 No -27 0.77 Yes 39 57.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68702706 + NM_133509 RAD51B 0 . . . 4.91 76.63 30 6.45 Yes 30 0.27 No 0 0 No -23 0.34 No 47 70.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68771924 + NM_133509 RAD51B 0 . . . 4.13 68.04 22 5.29 No 67 0.95 Yes 0 0 No -21 0.47 No 41 62.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48033190 + NM_000179 MSH6 0 . . . 0.36 67.02 22 5.29 No 49 0.32 No 0 0 No -21 0.38 No 47 38.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108110655 + NM_000051 ATM 0 . . . 3.63 76.94 44 7.32 Yes 23 1.15 Yes 0 0 No -43 0.57 No 47 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68379472 + NM_133509 RAD51B 0 . . . 0.76 0 29 6.79 Yes 7 1.47 Yes 0 0 No -28 0.86 Yes 21 66.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69091364 + NM_133509 RAD51B 0 . . . 1.17 0 26 5.66 Yes -4 0.06 No 0 0 No -25 0.88 Yes 51 33.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215625205 - NM_000465 BARD1 0 . . . 0.25 67.52 59 8.22 Yes 48 0.46 No 0 0 No -27 0.84 Yes 48 74.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41014582 + NM_001164269 RAD51 0 . . . 3.63 72.85 17 5.83 Yes 58 -3.88 No 0 0 No -16 0.37 No 48 57.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131926561 + NM_005732 RAD50 0 . . . 2.82 88.26 23 5.19 No 6 -2.21 No 0 0 No -22 0.71 Yes 46 52.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69134133 + NM_133509 RAD51B 0 . . . 5.31 78.19 19 5 No 64 0.79 Yes 0 0 No -53 0.75 Yes 40 64.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21996024 - NM_000077 CDKN2A 0 . . . 6.51 79.41 13 5.47 No 76 1.38 Yes 0 0 No -57 0.52 No 43 96.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68357406 + NM_133509 RAD51B 0 . . . 10.39 93.35 22 4.97 No 22 0.82 Yes 0 0 No -27 0.77 Yes 46 68.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68885858 + NM_133509 RAD51B 0 . . . 6.09 78.66 23 5.67 Yes 5 0.37 No 0 0 No -22 0.61 No 47 75.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41202009 - NM_007294 BRCA1 0 . . . 0.04 0 21 5.64 Yes 55 0.73 No 0 0 No -23 0.48 No 30 59.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131973108 + NM_005732 RAD50 0 . . . 3.62 80.53 29 4.12 No 76 0.38 No 0 0 No -25 0.6 No 45 95.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59764938 - NM_032043 BRIP1 0 . . . 8.91 75.65 15 4.44 No 50 0.53 No 0 0 No -14 0.36 No 42 48.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131949211 + NM_005732 RAD50 0 . . . 0.07 73.13 24 5 No 56 1.3 Yes 0 0 No -23 0.94 Yes 20 54.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6015790 - NM_000535 PMS2 0 . . . 6.5 86.2 24 4.67 No 9 0.98 Yes 0 0 No -23 0.63 No 49 86.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105202816 + NM_021930 RINT1 0 . . . 2.08 84.8 27 5.55 No 33 1.14 Yes 0 0 No -27 0.56 No 51 71.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56800934 + NM_058216 RAD51C 0 . . . 4.34 72.84 26 5.08 No 21 1.43 Yes 0 0 No -25 0.38 No 47 69.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68317685 + NM_133509 RAD51B 0 . . . 7.69 96.33 28 4.84 No 4 1.16 Yes 0 0 No -27 0.72 Yes 42 72.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68896597 + NM_133509 RAD51B 0 . . . 6.96 86.96 24 6.38 Yes 50 1.21 Yes 0 0 No -23 0.68 Yes 51 68.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47774328 + NM_000251 MSH2 0 . . . 6.72 82.61 20 6 Yes 35 0.83 Yes 0 0 No -19 0.76 Yes 46 71.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90982035 - NM_002485 NBN 0 . . . 0.06 67.62 18 4.9 No 76 0.97 Yes 0 0 No -19 0.78 Yes 48 79.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59906563 - NM_032043 BRIP1 0 . . . 0.55 0 25 4.9 No 13 1.41 Yes 0 0 No -25 0.54 No 30 81.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47639974 + NM_000251 MSH2 0 . . . 2.51 64.27 27 5.74 Yes 45 1.39 Yes 0 0 No -26 0.78 Yes 38 43.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68805157 + NM_004360 CDH1 0 . . . 3.8 0 22 4.59 No 8 1.68 Yes 0 0 No -24 0.78 Yes 38 57.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68305346 + NM_133509 RAD51B 0 . . . 6.61 68.82 16 5.74 Yes 9 1.05 Yes 0 0 No -26 0.58 No 49 94.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68855590 + NM_133509 RAD51B 0 . . . 4.47 81.5 14 5.39 No 33 -3.2 No 0 0 No -22 0.84 Yes 44 82.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89711750 + NM_000314 PTEN 0 . . . 4.13 75.24 30 5.74 Yes 53 1.22 Yes 0 0 No -29 0.76 Yes 60 34.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68985379 + NM_133509 RAD51B 0 . . . 2.1 73.7 29 6.32 Yes 42 1.32 Yes 0 0 No -28 0.92 Yes 16 63.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68428553 + NM_133509 RAD51B 0 . . . 2.53 60.88 18 4.42 No 27 -3.2 No 0 0 No -26 0.5 No 39 55.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68592866 + NM_133509 RAD51B 0 . . . 8.26 85.18 19 5.48 No 52 -3.22 No 0 0 No -18 0.51 No 45 56.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7590289 - NM_000546 TP53 0 . . . 5.49 73.63 28 5.83 Yes 5 0.15 No 0 0 No -24 0.48 No 53 92.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68823493 + NM_004360 CDH1 0 . . . 1.29 0 14 5.39 No 63 1.28 Yes 0 0 No -22 0.51 No 40 73.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108211395 + NM_000051 ATM 0 . . . 2.67 67.26 18 4.9 No -4 0.57 No 0 0 No -17 0.71 Yes 49 47.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105175048 + NM_021930 RINT1 0 . . . 4.18 78.39 24 5 No 73 -5.32 No 0 0 No -23 0.94 Yes 48 52.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94162136 - NM_005591 MRE11 0 . . . 9.02 81.28 12 4.03 No 36 1.63 Yes 0 0 No -21 0.69 Yes 45 69.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75496410 - NM_001040108 MLH3 0 . . . 3.05 64.36 19 5.46 No 24 0.56 No 0 0 No -24 0.67 Yes 34 17.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68916615 + NM_133509 RAD51B 0 . . . 2.54 69.55 31 5.74 Yes 37 1.35 Yes 0 0 No -30 0.56 No 21 72.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75487073 - NM_001040108 MLH3 0 . . . 0.57 0 15 4.58 No 56 1.21 Yes 0 0 No -57 0.45 No 45 58.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108197044 + NM_000051 ATM 0 . . . 2.67 64.79 17 4.8 No 1 0.65 No 0 0 No -32 0.33 No 42 63.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215601577 - NM_000465 BARD1 0 . . . 2.83 66.21 24 4.77 No 68 0.09 No 0 0 No -44 0.2 No 51 60.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47693667 + NM_000251 MSH2 0 . . . 4.93 82.87 21 4.8 No 4 0.2 No 0 0 No -20 0.95 Yes 46 64.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6016996 - NM_000535 PMS2 0 . . . 3.11 74.38 14 4.47 No 31 0.99 Yes 0 0 No -17 0.49 No 38 95.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68546075 + NM_133509 RAD51B 0 . . . 3.69 61.7 18 4.72 No 58 1.58 Yes 0 0 No -40 0.64 No 48 68.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47726180 + NM_000251 MSH2 0 . . . 0.18 78.49 26 5.17 No 76 1.17 Yes 0 0 No -25 0.74 Yes 50 79.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68497934 + NM_133509 RAD51B 0 . . . 4.08 73.04 20 7.21 Yes 68 -4.62 No 0 0 No -19 0.75 Yes 50 54.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68965170 + NM_133509 RAD51B 0 . . . 10.47 88.55 16 4.47 No 30 0.63 No 0 0 No -49 0.29 No 42 60.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68698456 + NM_133509 RAD51B 0 . . . 3.09 82.65 41 6.93 Yes 41 -2.6 No 0 0 No -25 0.37 No 50 38.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89669337 + NM_000314 PTEN 0 . . . 2.95 86.85 41 7.13 Yes 37 0.62 No 0 0 No -40 0.61 No 44 58.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59892899 - NM_032043 BRIP1 0 . . . 0.8 53.45 23 5.07 No 38 0.52 No 0 0 No -22 0.53 No 54 23.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59760123 - NM_032043 BRIP1 0 . . . 2.12 63.28 27 6.77 Yes 27 0.31 No 0 0 No -27 0.61 No 46 65.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68626976 + NM_133509 RAD51B 0 . . . 5.52 70.34 18 4.04 No 45 -4.57 No 0 0 No -37 0.4 No 41 68.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68749876 + NM_133509 RAD51B 0 . . . 3.19 72.42 36 6.77 Yes 8 1.48 Yes 0 0 No -35 0.76 Yes 33 41.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68498423 + NM_133509 RAD51B 0 . . . 0.45 61.76 23 4.18 No -4 0.01 No 0 0 No -23 0.88 Yes 46 34.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32896875 + NM_000059 BRCA2 0 . . . 3.65 71.07 25 4.31 No 33 -2.4 No 0 0 No -24 0.88 Yes 50 60.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90951408 - NM_002485 NBN 0 . . . 9.21 85.08 26 4.95 No 74 0.7 No 0 0 No -25 0.93 Yes 42 58.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41011114 + NM_001164269 RAD51 0 . . . 0.87 68.99 33 6.21 Yes 75 -5.61 No 0 0 No -32 0.53 No 49 71.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59937685 - NM_032043 BRIP1 0 . . . 2.1 61.86 15 5.39 No 47 0.7 No 0 0 No -49 0.7 Yes 20 90.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47784903 + NM_000251 MSH2 0 . . . 1.73 73.8 32 5.74 Yes -1 0.38 No 0 0 No -31 0.88 Yes 45 49.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68530817 + NM_133509 RAD51B 0 . . . 9.93 94.24 15 5.39 No 65 0.72 No 0 0 No -45 0.4 No 51 44.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59803366 - NM_032043 BRIP1 0 . . . 6.19 84.02 33 7.45 Yes 62 0.09 No 0 0 No -32 0.71 Yes 53 35.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68530162 + NM_133509 RAD51B 0 . . . 1.02 66.69 41 6.78 Yes 67 0.31 No 0 0 No -25 0.61 No 61 54.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90988216 - NM_002485 NBN 0 . . . 2.5 71.65 22 5.29 No 1 1.54 Yes 0 0 No -53 0.53 No 62 35.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68580009 + NM_133509 RAD51B 0 . . . 0.09 75.26 15 7.87 Yes 23 0.01 No 0 0 No -26 0.68 Yes 47 44.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69060331 + NM_133509 RAD51B 0 . . . 3.8 0 12 4.23 No 73 -4.02 No 0 0 No -58 0.47 No 43 48.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59901653 - NM_032043 BRIP1 0 . . . 1.91 79 36 5.76 Yes 62 -3.66 No 0 0 No -29 0.65 No 47 49.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108185270 + NM_000051 ATM 0 . . . 1.63 80.53 27 7.16 Yes 34 0.05 No 0 0 No -26 0.51 No 24 42.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68817762 + NM_133509 RAD51B 0 . . . 4.71 66.41 26 5.36 No 16 1.12 Yes 0 0 No -23 0.53 No 47 70.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68555246 + NM_133509 RAD51B 0 . . . 7.14 87.67 45 5.02 No 64 2.29 Yes 0 0 No -18 0.56 No 46 67.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47666036 + NM_000251 MSH2 0 . . . 4.27 78.49 36 5.64 Yes 7 1.58 Yes 0 0 No -31 0.55 No 37 65.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7570611 - NM_000546 TP53 0 . . . 4.4 0 28 5.2 No 21 1.12 Yes 0 0 No -27 0.72 Yes 43 91.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190718752 + NM_000534 PMS1 0 . . . 6.14 82.2 47 7.22 Yes 43 0.93 Yes 0 0 No -31 0.43 No 24 46.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68875108 + NM_133509 RAD51B 0 . . . 3.59 78.1 36 7.57 Yes -3 0.11 No 0 0 No -35 0.49 No 41 49.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6028118 - NM_000535 PMS2 0 . . . 6.35 87.94 19 4.46 No 51 1.46 Yes 0 0 No -18 0.76 Yes 40 93.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108152402 + NM_000051 ATM 0 . . . 7.09 81.39 18 4.8 No 50 -2.1 No 0 0 No -22 0.52 No 35 74.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84400003 - NM_139076 FAM175A 0 . . . 3.09 72.91 20 4.13 No 13 0.39 No 0 0 No -23 0.5 No 25 75.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59925944 - NM_032043 BRIP1 0 . . . 4.22 82.86 16 5.2 No 40 0.3 No 0 0 No -20 0.51 No 47 53.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68502852 + NM_133509 RAD51B 0 . . . 6.97 82.08 36 5.37 No 55 1.28 Yes 0 0 No -30 0.88 Yes 31 74.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190695315 + NM_000534 PMS1 0 . . . 11.07 80.12 20 6.15 Yes 11 0.67 No 0 0 No -19 0.85 Yes 37 45.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23620071 - NM_024675 PALB2 0 . . . 1.26 73.34 22 3.7 No 18 0.74 No 0 0 No -22 0.48 No 45 48.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68488364 + NM_133509 RAD51B 0 . . . 8.63 93.52 17 4.8 No 37 1.73 Yes 0 0 No -20 0.7 Yes 45 50.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59768489 - NM_032043 BRIP1 0 . . . 7.5 75.58 22 4.8 No 6 1.32 Yes 0 0 No -21 0.54 No 44 81.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68304218 + NM_133509 RAD51B 0 . . . 2.61 67.8 21 5.04 No -1 0.66 No 0 0 No -20 0.76 Yes 51 46.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90951587 - NM_002485 NBN 0 . . . 1.49 0 20 4.9 No 24 0.48 No 0 0 No -45 0.56 No 34 93.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68687418 + NM_133509 RAD51B 0 . . . 1.74 62.06 36 6.6 Yes 27 0.44 No 0 0 No -20 0.9 Yes 41 62.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90978092 - NM_002485 NBN 0 . . . 2.27 65.89 22 4.8 No 1 0.9 Yes 0 0 No -21 0.58 No 40 59.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32915535 + NM_000059 BRCA2 0 . . . 4.86 81.43 17 5.29 No 65 -5.25 No 0 0 No -16 0.51 No 45 47.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47761000 + NM_000251 MSH2 0 . . . 7.16 74.7 25 6.24 Yes 22 0.35 No 0 0 No -22 0.76 Yes 36 31.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84404066 - NM_139076 FAM175A 0 . . . 7.68 85.31 15 5.2 No 31 0.52 No 0 0 No -20 0.4 No 16 44.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94173204 - NM_005591 MRE11 0 . . . 1.71 66.49 32 5.74 Yes 15 0.44 No 0 0 No -28 0.35 No 49 60.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75516843 - NM_001040108 MLH3 0 . . . 1.18 79.86 29 6.28 Yes 73 0.44 No 0 0 No -28 0.9 Yes 48 84.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68808028 + NM_004360 CDH1 0 . . . 2.18 82.27 9 4.9 No 32 0.63 No 0 0 No -17 0.61 No 26 63.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152369772 - NM_005431 XRCC2 0 . . . 4.05 75.27 25 6.03 Yes 34 0.24 No 0 0 No -24 0.78 Yes 48 46.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89651993 + NM_000314 PTEN 0 . . . 5.63 75.19 15 4.9 No 17 0.45 No 0 0 No -21 0.59 No 40 85.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90978318 - NM_002485 NBN 0 . . . 4.46 79.41 20 5.2 No 3 0.66 No 0 0 No -33 0.5 No 45 74.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68517798 + NM_133509 RAD51B 0 . . . 1.85 74.29 33 6.93 Yes 2 0.7 No 0 0 No -32 0.94 Yes 48 47.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48018444 + NM_000179 MSH6 0 . . . 0.81 64.38 24 5.48 No 71 0.15 No 0 0 No -28 0.68 Yes 57 55.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68901148 + NM_133509 RAD51B 0 . . . 3.57 77.16 36 5.57 Yes 20 0.64 No 0 0 No -29 0.84 Yes 38 78.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108116042 + NM_000051 ATM 0 . . . 4.81 62.8 13 4.36 No 31 0.58 No 0 0 No -35 0.24 No 54 75.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94214580 - NM_005591 MRE11 0 . . . 0.73 68.81 20 4.69 No 70 -4.39 No 0 0 No -19 0.93 Yes 41 23.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68365878 + NM_133509 RAD51B 0 . . . 4.19 84.22 20 3.89 No 8 1.36 Yes 0 0 No -22 0.6 No 50 91.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68500912 + NM_133509 RAD51B 0 . . . 2.11 77.11 13 5.2 No 12 1.69 Yes 0 0 No -20 0.43 No 31 74.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90986599 - NM_002485 NBN 0 . . . 1.85 69.62 61 6.11 Yes 33 -2.42 No 0 0 No -36 0.85 Yes 48 80.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68782395 + NM_004360 CDH1 0 . . . 9.98 85.61 23 4.69 No 59 0.34 No 0 0 No -20 0.75 Yes 38 95.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1217257 + NM_000455 STK11 0 . . . 4.22 89.96 26 6.42 Yes 29 0.45 No 0 0 No -25 0.72 Yes 12 68.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108145277 + NM_000051 ATM 0 . . . 2.4 0 37 6.08 Yes 69 0.42 No 0 0 No -22 0.48 No 46 73.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48020816 + NM_000179 MSH6 0 . . . 4.68 76.19 16 5.19 No 71 0.18 No 0 0 No -15 0.52 No 47 42.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108145036 + NM_000051 ATM 0 . . . 1.17 65.97 17 4.58 No 6 1 Yes 0 0 No -25 0.38 No 36 81.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190731790 + NM_000534 PMS1 0 . . . 0.49 67.19 64 8.83 Yes 60 -5.3 No 0 0 No -24 0.39 No 53 26.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69092938 + NM_133509 RAD51B 0 . . . 2.12 80.89 30 6.83 Yes 44 -2.25 No 0 0 No -24 0.55 No 44 76.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68621317 + NM_133509 RAD51B 0 . . . 9.43 91.32 18 4.92 No 16 1.24 Yes 0 0 No -24 0.92 Yes 49 83.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68636423 + NM_133509 RAD51B 0 . . . 1.48 69.29 21 4.02 No 59 0.25 No 0 0 No -20 0.83 Yes 53 82.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108110484 + NM_000051 ATM 0 . . . 5.91 80 36 6.11 Yes 62 1.2 Yes 0 0 No -20 0.41 No 47 53.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108097786 + NM_000051 ATM 0 . . . 4.45 87.85 23 8.27 Yes 70 0.34 No 0 0 No -22 0.83 Yes 23 21.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59828360 - NM_032043 BRIP1 0 . . . 0.77 0 49 5.81 Yes 42 1.15 Yes 0 0 No -27 0.84 Yes 40 80.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108141371 + NM_000051 ATM 0 . . . 6.72 79.92 24 5.38 No 35 0.57 No 0 0 No -23 0.82 Yes 44 66.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47737435 + NM_000251 MSH2 0 . . . 0.04 0 20 4.81 No 22 0.67 No 0 0 No -24 0.63 No 36 65.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48013708 + NM_000179 MSH6 0 . . . 5.01 82.31 17 5.56 Yes 57 0.96 Yes 0 0 No -27 0.45 No 49 45.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68414917 + NM_133509 RAD51B 0 . . . 1.43 72.34 14 5.62 Yes 22 0.56 No 0 0 No -21 0.52 No 30 64.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68942082 + NM_133509 RAD51B 0 . . . 4.2 74.29 21 4.79 No 33 -4.08 No 0 0 No -23 0.69 Yes 46 70.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104180972 - NM_001100119 XRCC3 0 . . . 3.34 81.5 27 7.33 Yes 15 0.89 Yes 0 0 No -26 0.92 Yes 43 94.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131926366 + NM_005732 RAD50 0 . . . 0.43 69.01 16 4.11 No 54 0.53 No 0 0 No -32 0.67 Yes 34 63.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59826091 - NM_032043 BRIP1 0 . . . 1.22 75.45 33 5.74 Yes 3 1.32 Yes 0 0 No -32 0.61 No 42 58.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68620860 + NM_133509 RAD51B 0 . . . 4.43 77.44 23 6.93 Yes 41 1.01 Yes 0 0 No -22 0.96 Yes 17 67.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21977980 - NM_000077 CDKN2A 0 . . . 2.11 77.25 32 5.57 Yes 16 0.84 Yes 0 0 No -24 0.6 No 42 70.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68493156 + NM_133509 RAD51B 0 . . . 2.73 76.16 24 5.21 No 7 0.95 Yes 0 0 No -23 0.74 Yes 47 72.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37082156 + NM_000249 MLH1 0 . . . 0.97 74.21 22 5.51 No 69 0.77 Yes 0 0 No -26 0.52 No 52 53.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47682861 + NM_000251 MSH2 0 . . . 2.86 74.23 36 6.08 Yes 16 0.58 No 0 0 No -30 0.65 No 42 79.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69005113 + NM_133509 RAD51B 0 . . . 2.05 66.8 25 5.48 No 56 -1.42 No 0 0 No -24 0.7 Yes 30 51.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68813753 + NM_133509 RAD51B 0 . . . 9.29 80.02 28 4.6 No 14 1.24 Yes 0 0 No -28 0.67 Yes 44 82.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108177785 + NM_000051 ATM 0 . . . 0.98 0 32 5.96 Yes 72 1.01 Yes 0 0 No -31 0.9 Yes 41 45.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68826584 + NM_133509 RAD51B 0 . . . 1.47 74.33 56 10.71 Yes 60 -1.56 No 0 0 No -31 0.69 Yes 42 52.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68768497 + NM_133509 RAD51B 0 . . . 6.45 85.02 15 5.92 Yes 6 1.26 Yes 0 0 No -28 0.43 No 52 85.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68325955 + NM_133509 RAD51B 0 . . . 2.29 0 20 6.27 Yes 56 0.86 Yes 0 0 No -28 0.58 No 48 57.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68519240 + NM_133509 RAD51B 0 . . . 6.23 73.49 37 5.77 Yes 24 0.91 Yes 0 0 No -22 0.5 No 50 51.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190727506 + NM_000534 PMS1 0 . . . 5 82.45 31 5.3 No 7 0.37 No 0 0 No -59 0.3 No 45 49.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6046183 - NM_000535 PMS2 0 . . . 1.08 84.22 32 4.07 No 33 0.98 Yes 0 0 No -24 0.46 No 51 60.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47724266 + NM_000251 MSH2 0 . . . 3.41 70.48 30 4.66 No 52 1.34 Yes 0 0 No -32 0.33 No 46 51.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75486242 - NM_001040108 MLH3 0 . . . 2.69 81.63 28 6.44 Yes 13 0.6 No 0 0 No -27 0.91 Yes 45 79.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32969124 + NM_000059 BRCA2 0 . . . 7.44 88.01 52 7.13 Yes 39 0.03 No 0 0 No -23 0.87 Yes 42 78.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59901965 - NM_032043 BRIP1 0 . . . 8.05 81.84 29 3.94 No 34 0.34 No 0 0 No -60 0.27 No 41 60.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32904141 + NM_000059 BRCA2 0 . . . 2.74 75.33 21 5 No -3 0.37 No 0 0 No -46 0.69 Yes 37 87.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41001484 + NM_001164269 RAD51 0 . . . 4.25 76.63 34 5.83 Yes 74 0.2 No 0 0 No -33 0.52 No 45 71.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40989957 + NM_001164269 RAD51 0 . . . 1.63 72.33 32 4.7 No 71 1.09 Yes 0 0 No -31 0.45 No 27 81.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94183946 - NM_005591 MRE11 0 . . . 7.65 82.9 22 5.25 No 70 1.72 Yes 0 0 No -28 0.53 No 37 55.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131976909 + NM_005732 RAD50 0 . . . 1.38 73.72 32 5.68 Yes 21 -1.31 No 0 0 No -32 0.46 No 51 81.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68976539 + NM_133509 RAD51B 0 . . . 5.7 87.32 23 4.23 No 14 -0.91 No 0 0 No -18 0.91 Yes 44 40.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152363969 - NM_005431 XRCC2 0 . . . 0.32 74.68 27 5.2 No 37 0.24 No 0 0 No -26 0.91 Yes 54 82.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68849344 + NM_133509 RAD51B 0 . . . 1.59 62.47 28 5.38 No 15 -2.29 No 0 0 No -27 0.57 No 43 78.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37091440 + NM_000249 MLH1 0 . . . 2.82 59.63 41 6.71 Yes 16 1.05 Yes 0 0 No -30 0.62 No 38 82.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68428187 + NM_133509 RAD51B 0 . . . 1.27 73.14 23 5.39 No 36 0.6 No 0 0 No -22 0.94 Yes 22 70.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68330003 + NM_133509 RAD51B 0 . . . 8.18 83.28 65 7.3 Yes 5 1.22 Yes 0 0 No -23 0.85 Yes 41 71.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68794969 + NM_133509 RAD51B 0 . . . 8.61 83.3 37 6.8 Yes -4 0.71 No 0 0 No -24 0.58 No 38 59.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510629 - NM_001040108 MLH3 0 . . . 3.45 85.02 52 8.04 Yes 3 1.16 Yes 0 0 No -29 0.58 No 55 47.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69013514 + NM_133509 RAD51B 0 . . . 2.71 70.88 41 5.98 Yes 51 -3.44 No 0 0 No -35 0.78 Yes 45 34.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84396218 - NM_139076 FAM175A 0 . . . 2.06 78.52 16 4.81 No 67 0.25 No 0 0 No -20 0.82 Yes 51 64.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89683299 + NM_000314 PTEN 0 . . . 3.51 61.64 17 4.79 No 50 0.27 No 0 0 No -23 0.65 No 59 21.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108170259 + NM_000051 ATM 0 . . . 5.92 82.31 46 6.61 Yes 57 1.13 Yes 0 0 No -29 0.28 No 55 37.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105180498 + NM_021930 RINT1 0 . . . 0.63 62.14 12 5.1 No 20 1.18 Yes 0 0 No -27 0.65 No 38 84.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190654568 + NM_000534 PMS1 0 . . . 6.22 90.53 18 5.39 No 41 0.8 Yes 0 0 No -23 0.5 No 49 58.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215624740 - NM_000465 BARD1 0 . . . 0.14 60.49 20 5.09 No 67 0.44 No 0 0 No -27 0.47 No 43 48.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32903005 + NM_000059 BRCA2 0 . . . 5.84 75.54 10 5.1 No 16 1.14 Yes 0 0 No -27 0.79 Yes 41 83.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47663691 + NM_000251 MSH2 0 . . . 3.45 85.02 47 6.91 Yes 3 1.16 Yes 0 0 No -32 0.62 No 44 59.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68840591 + NM_133509 RAD51B 0 . . . 3.01 75.95 20 4.88 No 45 0.24 No 0 0 No -19 0.68 Yes 49 71.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59891879 - NM_032043 BRIP1 0 . . . 4.43 72.26 29 5.92 Yes 11 0.44 No 0 0 No -28 0.76 Yes 35 72.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47692969 + NM_000251 MSH2 0 . . . 3.78 83.56 16 5.29 No 49 0.48 No 0 0 No -18 0.56 No 47 77.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94223744 - NM_005591 MRE11 0 . . . 0.09 70.38 29 5.92 Yes 40 -1.53 No 0 0 No -28 0.77 Yes 25 67.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37075403 + NM_000249 MLH1 0 . . . 4.7 87.83 26 6.62 Yes 37 0.63 No 0 0 No -25 0.9 Yes 49 49.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131932729 + NM_005732 RAD50 0 . . . 3.6 84.11 35 6.77 Yes 38 -4.02 No 0 0 No -34 0.49 No 59 43.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131919573 + NM_005732 RAD50 0 . . . 4.02 80.12 29 5.48 No 10 1.12 Yes 0 0 No -28 0.93 Yes 48 79.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41248818 - NM_007294 BRCA1 0 . . . 4.76 87.36 32 5.33 No 55 -3.92 No 0 0 No -31 0.68 Yes 36 80.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94219658 - NM_005591 MRE11 0 . . . 5.25 77.81 17 6.93 Yes 1 0.42 No 0 0 No -29 0.4 No 39 57.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37056199 + NM_000249 MLH1 0 . . . 5.27 78.36 22 7.42 Yes 2 0.33 No 0 0 No -21 0.85 Yes 39 68.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68316987 + NM_133509 RAD51B 0 . . . 0.69 67.29 37 5.95 Yes 41 0.53 No 0 0 No -36 0.92 Yes 17 80.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29092205 - NM_001005735 CHEK2 0 . . . 1.57 0 17 4.8 No 68 0.46 No 0 0 No -56 0.32 No 49 44.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68512209 + NM_133509 RAD51B 0 . . . 5 75.54 58 7.81 Yes 73 0.42 No 0 0 No -57 0.41 No 43 65.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68692480 + NM_133509 RAD51B 0 . . . 3.88 77.2 73 9.22 Yes 10 0.14 No 0 0 No -19 0.73 Yes 48 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69063069 + NM_133509 RAD51B 0 . . . 4.54 69.52 17 6.31 Yes 61 -5.2 No 0 0 No -24 0.81 Yes 43 86.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190722269 + NM_000534 PMS1 0 . . . 2.35 77.64 21 5.74 Yes 20 -2.09 No 0 0 No -20 0.75 Yes 50 40.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59929710 - NM_032043 BRIP1 0 . . . 1.9 0 46 8.52 Yes 43 0.38 No 0 0 No -21 0.48 No 28 75.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68771117 + NM_004360 CDH1 0 . . . 5.92 77.48 28 5.15 No 38 0.26 No 0 0 No -27 0.81 Yes 52 74.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59866527 - NM_032043 BRIP1 0 . . . 1.61 74.34 19 6.94 Yes 27 1.32 Yes 0 0 No -19 0.7 Yes 50 70.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59869369 - NM_032043 BRIP1 0 . . . 4.73 78.39 20 6.78 Yes 22 0.23 No 0 0 No -19 0.51 No 37 68.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75513530 - NM_001040108 MLH3 0 . . . 4.13 85.45 24 5 No 72 0.93 Yes 23 0.71 Yes -23 0.66 No 49 68.39 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 41233276 - NM_007294 BRCA1 0 . . . 6.44 78.64 18 6.24 Yes 3 1.23 Yes 0 0 No -21 0.61 No 39 84.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68496327 + NM_133509 RAD51B 0 . . . 8.1 80.03 12 5.47 No 24 1.34 Yes 0 0 No -45 0.28 No 34 95.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68810644 + NM_133509 RAD51B 0 . . . 0.73 62.65 24 5.1 No 69 -4.92 No 0 0 No -24 0.37 No 47 62.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90947568 - NM_002485 NBN 0 . . . 5.47 72.72 30 6.61 Yes 65 0.8 Yes 0 0 No -24 0.23 No 40 87.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108177591 + NM_000051 ATM 0 . . . 0.88 63.05 32 6.99 Yes 54 0.68 No 0 0 No -31 0.6 No 39 48.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32900733 + NM_000059 BRCA2 0 . . . 2.91 67.2 30 5.19 No 31 0.27 No 0 0 No -57 0.36 No 49 82.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68610874 + NM_133509 RAD51B 0 . . . 7.04 78.12 22 6.08 Yes 9 1.03 Yes 0 0 No -21 0.73 Yes 49 85.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68825714 + NM_004360 CDH1 0 . . . 8.86 87.63 19 6.08 Yes 62 0.59 No 0 0 No -19 0.48 No 35 57.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190665320 + NM_000534 PMS1 0 . . . 3.28 75.15 37 6.2 Yes 48 0.56 No 0 0 No -45 0.33 No 44 40.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68761275 + NM_133509 RAD51B 0 . . . 1.27 0 26 5.87 Yes 61 0.1 No 0 0 No -25 0.65 No 41 74.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59871644 - NM_032043 BRIP1 0 . . . 8.95 78.73 26 5.32 No 40 1.52 Yes 0 0 No -25 0.7 Yes 46 69.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7570721 - NM_000546 TP53 0 . . . 6.29 81.89 26 4.34 No 49 2.03 Yes 0 0 No -56 0.83 Yes 14 66.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68794793 + NM_133509 RAD51B 0 . . . 8.58 84.21 26 5.02 No 69 2.01 Yes 0 0 No -26 0.46 No 21 70.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68773562 + NM_004360 CDH1 0 . . . 5.4 90.92 16 5.38 No 43 1.14 Yes 0 0 No -22 0.88 Yes 15 76.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84401329 - NM_139076 FAM175A 0 . . . 0.42 74.73 32 4.95 No 36 1.25 Yes 0 0 No -31 0.53 No 22 81.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68525711 + NM_133509 RAD51B 0 . . . 5.29 75.77 22 4.9 No 74 -4.03 No 0 0 No -45 0.52 No 41 81.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105184518 + NM_021930 RINT1 0 . . . 4.9 80.22 16 5.65 Yes 58 -3.88 No 0 0 No -28 0.7 Yes 48 83.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32964920 + NM_000059 BRCA2 0 . . . 4.68 78.44 47 8.77 Yes 52 0.78 Yes 0 0 No -32 0.51 No 51 63.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29123295 - NM_001005735 CHEK2 0 . . . 1.24 79.53 21 4.79 No 48 1.06 Yes 0 0 No -20 0.55 No 54 33.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75511815 - NM_001040108 MLH3 0 . . . 7.67 87.6 15 3.34 No 58 1.21 Yes 0 0 No -14 0.53 No 43 45.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215641686 - NM_000465 BARD1 0 . . . 1.94 0 20 4.56 No 50 0.48 No 0 0 No -19 0.91 Yes 51 87.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108139675 + NM_000051 ATM 0 . . . 5.84 71.35 40 3.76 No 27 0.42 No 0 0 No -35 0.54 No 43 62.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848799 - NM_032043 BRIP1 0 . . . 3.19 68.78 19 5.57 Yes 18 0.42 No 0 0 No -24 0.76 Yes 46 64.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59941349 - NM_032043 BRIP1 0 . . . 1.08 72.28 15 4.08 No 67 0.89 Yes 0 0 No -21 0.72 Yes 50 64.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108106819 + NM_000051 ATM 0 . . . 2.82 78.91 22 6.19 Yes 68 -3.92 No 0 0 No -21 0.79 Yes 41 73.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59918126 - NM_032043 BRIP1 0 . . . 6.8 89.86 21 7.31 Yes 3 -0.95 No 0 0 No -20 0.71 Yes 31 65.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37075851 + NM_000249 MLH1 0 . . . 1.18 0 27 5.2 No 60 0.66 No 0 0 No -26 0.56 No 39 43.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29125047 - NM_001005735 CHEK2 0 . . . 2.14 71.92 39 5.55 No 63 1.11 Yes 0 0 No -27 0.44 No 39 91.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94181122 - NM_005591 MRE11 0 . . . 3.58 73.21 31 5.15 No 38 0.56 No 0 0 No -26 0.49 No 36 76.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59802409 - NM_032043 BRIP1 0 . . . 5.48 83.37 18 4.75 No 54 -3.09 No 0 0 No -17 0.6 No 48 41.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94191401 - NM_005591 MRE11 0 . . . 9.77 88.43 29 5.32 No 6 0.26 No 0 0 No -28 0.88 Yes 44 83.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37090568 + NM_000249 MLH1 0 . . . 4.14 73.82 16 6.4 Yes 74 0.02 No 0 0 No -19 0.43 No 57 58.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32961910 + NM_000059 BRCA2 0 . . . 6.45 76.73 14 4.86 No 2 0.78 Yes 0 0 No -24 0.75 Yes 47 70.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68380032 + NM_133509 RAD51B 0 . . . 0.52 0 15 5.1 No 35 1.17 Yes 0 0 No -55 0.53 No 59 40.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68510089 + NM_133509 RAD51B 0 . . . 2.24 0 29 7.49 Yes 30 0.41 No 0 0 No -28 0.55 No 43 74.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68530892 + NM_133509 RAD51B 0 . . . 8.08 86.5 27 6.38 Yes 5 1.01 Yes 0 0 No -31 0.65 No 41 69.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32968175 + NM_000059 BRCA2 0 . . . 5.05 79.42 20 5.1 No 51 1.16 Yes 0 0 No -19 0.52 No 34 85.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41004922 + NM_001164269 RAD51 0 . . . 1.41 0 87 9.99 Yes 54 0.55 No 0 0 No -24 0.51 No 34 57.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69135559 + NM_133509 RAD51B 0 . . . 2.39 70.21 39 6.18 Yes 56 -5.04 No 0 0 No -38 0.37 No 51 28.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41236985 - NM_007294 BRCA1 0 . . . 0.26 60.37 24 5.48 No 60 1.22 Yes 0 0 No -23 0.88 Yes 35 60.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68761070 + NM_133509 RAD51B 0 . . . 4.68 76.29 19 5.32 No 58 0.58 No 0 0 No -22 0.62 No 52 58.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68324106 + NM_133509 RAD51B 0 . . . 4.08 81.79 22 7.15 Yes 22 1.02 Yes 0 0 No -21 0.93 Yes 46 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68743810 + NM_133509 RAD51B 0 . . . 4.77 68.17 23 5.08 No 21 1.43 Yes 0 0 No -22 0.63 No 37 64.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104180220 - NM_001100119 XRCC3 0 . . . 6.61 88.83 14 5.33 No 4 1.51 Yes 0 0 No -26 0.88 Yes 48 72.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68344376 + NM_133509 RAD51B 0 . . . 3.12 77.88 58 7.42 Yes 43 0.56 No 0 0 No -32 0.69 Yes 45 49.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68873237 + NM_133509 RAD51B 0 . . . 3.12 78.17 26 5.93 Yes 74 -2.63 No 0 0 No -25 0.55 No 60 31.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59902545 - NM_032043 BRIP1 0 . . . 4.42 84.22 32 4.42 No 8 1.13 Yes 0 0 No -26 0.43 No 50 95.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105194212 + NM_021930 RINT1 0 . . . 3.61 84.17 17 5.61 Yes 38 0.83 Yes 0 0 No -29 0.49 No 19 46.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195838 + NM_000051 ATM 0 . . . 2.03 69.09 24 5.67 Yes 12 1.63 Yes 0 0 No -23 0.59 No 17 61.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69127572 + NM_133509 RAD51B 0 . . . 3.8 78.89 14 4.24 No 11 0.78 Yes 0 0 No -52 0.38 No 47 40.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69089934 + NM_133509 RAD51B 0 . . . 10.56 88.89 36 7.27 Yes 9 1.86 Yes 0 0 No -35 0.95 Yes 49 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68872944 + NM_133509 RAD51B 0 . . . 1.65 63.41 32 5.01 No 52 0.77 No 0 0 No -27 0.44 No 39 29.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68513792 + NM_133509 RAD51B 0 . . . 4.4 73.45 32 4.77 No 31 0.8 Yes 0 0 No -31 0.56 No 46 61.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68721509 + NM_133509 RAD51B 0 . . . 1.14 65.75 17 4.8 No 22 -1.89 No 0 0 No -16 0.31 No 46 76.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68425712 + NM_133509 RAD51B 0 . . . 5.24 74.74 18 5.45 No 48 1.28 Yes 0 0 No -26 0.75 Yes 44 76.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89626064 + NM_000314 PTEN 0 . . . 1.3 65.39 35 5.95 Yes 33 -2.97 No 0 0 No -29 0.49 No 42 68.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37056664 + NM_000249 MLH1 0 . . . 5.1 81.97 18 4.89 No 40 0.66 No 0 0 No -20 0.7 Yes 47 47.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69019099 + NM_133509 RAD51B 0 . . . 4.85 68.83 18 4.9 No -3 0.66 No 0 0 No -29 0.44 No 40 63.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59782240 - NM_032043 BRIP1 0 . . . 1.47 66.12 31 5.45 No 56 -4.47 No 0 0 No -30 0.7 Yes 51 55.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90981706 - NM_002485 NBN 0 . . . 3.13 0 42 6.05 Yes 1 0.41 No 0 0 No -34 0.7 Yes 43 85.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75483666 - NM_001040108 MLH3 0 . . . 1.59 75.03 73 7.71 Yes 16 0.11 No 0 0 No -29 0.61 No 46 41.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21984231 - NM_000077 CDKN2A 0 . . . 0.41 0 22 6.56 Yes 26 0.2 No 0 0 No -21 0.78 Yes 49 73.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69138985 + NM_133509 RAD51B 0 . . . 6.15 70.93 22 5.29 No 18 0.44 No 0 0 No -21 0.76 Yes 37 44.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68799467 + NM_004360 CDH1 0 . . . 0.59 69.59 29 5.39 No 1 0.58 No 0 0 No -28 0.3 No 38 47.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89706981 + NM_000314 PTEN 0 . . . 1.38 73.52 80 8.68 Yes 9 0.72 No 0 0 No -27 0.43 No 49 69.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68858013 + NM_133509 RAD51B 0 . . . 4.63 68.29 40 6.78 Yes 38 1.7 Yes 0 0 No -39 0.79 Yes 39 60.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89642953 + NM_000314 PTEN 0 . . . 5.23 73.91 13 5.8 Yes 30 -1.91 No 0 0 No -28 0.36 No 48 67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37091300 + NM_000249 MLH1 0 . . . 3.59 74.06 25 5.84 Yes 22 0.14 No 0 0 No -24 0.9 Yes 36 95.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68833074 + NM_004360 CDH1 0 . . . 3.41 81.78 28 5.33 No 45 -3.49 No 0 0 No -23 0.48 No 43 45.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68779091 + NM_004360 CDH1 0 . . . 3.87 71.31 37 5.95 Yes 11 0.24 No 0 0 No -29 0.61 No 47 84.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68708381 + NM_133509 RAD51B 0 . . . 3.16 0 19 5.38 No 28 0.57 No 0 0 No -24 0.36 No 41 60.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41019625 + NM_001164269 RAD51 0 . . . 1.08 84.22 29 7.35 Yes 33 1.2 Yes 0 0 No -28 0.93 Yes 25 51.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59768154 - NM_032043 BRIP1 0 . . . 9.16 88.45 16 5.08 No 11 1.61 Yes 0 0 No -24 0.72 Yes 47 95.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68856060 + NM_133509 RAD51B 0 . . . 1.05 52.2 24 5.67 Yes 61 1.56 Yes 0 0 No -23 0.83 Yes 37 63.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69093108 + NM_133509 RAD51B 0 . . . 2.37 74.36 10 3.17 No 69 0.55 No 0 0 No -60 0.45 No 29 47.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69019189 + NM_133509 RAD51B 0 . . . 2.2 77.61 29 5.91 Yes 66 -3.04 No 0 0 No -28 0.78 Yes 43 84.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69104157 + NM_133509 RAD51B 0 . . . 3.49 77.45 20 5.1 No 33 0.7 No 0 0 No -19 0.8 Yes 39 68.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68528049 + NM_133509 RAD51B 0 . . . 2.95 70.85 30 5.47 No 13 0.77 No 0 0 No -23 0.5 No 40 64.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68667890 + NM_133509 RAD51B 0 . . . 1.61 81.61 22 4.87 No 64 0.7 No 0 0 No -21 0.76 Yes 48 80.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94171753 - NM_005591 MRE11 0 . . . 0.09 0 21 4.04 No 44 1.28 Yes 0 0 No -20 0.79 Yes 38 36.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68400868 + NM_133509 RAD51B 0 . . . 6.05 75.43 43 6.12 Yes 14 1.06 Yes 0 0 No -37 0.67 Yes 43 54.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48017778 + NM_000179 MSH6 0 . . . 6.96 84.53 20 4.69 No 14 0.85 Yes 0 0 No -19 0.93 Yes 44 66.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69027085 + NM_133509 RAD51B 0 . . . 2.72 78.6 19 4.89 No 24 1.22 Yes 0 0 No -18 0.43 No 38 92.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68530711 + NM_133509 RAD51B 0 . . . 1.45 74.86 16 5.08 No 22 0.58 No 0 0 No -25 0.5 No 36 57.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90964393 - NM_002485 NBN 0 . . . 4.71 70.07 25 5.37 No 52 0.49 No 0 0 No -22 0.57 No 42 37.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41014984 + NM_001164269 RAD51 0 . . . 1.36 67.55 18 4.49 No 41 1.15 Yes 0 0 No -17 0.63 No 58 46.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68788675 + NM_133509 RAD51B 0 . . . 3.37 80.12 25 5.94 Yes 7 1.16 Yes 0 0 No -24 0.89 Yes 51 81.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47806341 + NM_000251 MSH2 0 . . . 2.37 78.44 23 4.9 No 27 0.65 No 0 0 No -23 0.71 Yes 44 54.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68934205 + NM_133509 RAD51B 0 . . . 0.94 0 24 5.92 Yes 41 1.18 Yes 0 0 No -23 0.81 Yes 41 78.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68947431 + NM_133509 RAD51B 0 . . . 6.38 73.69 19 4.58 No 14 1.34 Yes 0 0 No -21 0.64 No 44 43.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48031093 + NM_000179 MSH6 0 . . . 5.98 86.87 25 4.8 No 8 0.69 No 0 0 No -24 0.81 Yes 50 57.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29136898 - NM_001005735 CHEK2 0 . . . 3.68 70.85 16 5.68 Yes 23 1.58 Yes 0 0 No -41 0.48 No 40 69.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47714319 + NM_000251 MSH2 0 . . . 6 80.5 46 6.9 Yes 7 1.43 Yes 0 0 No -45 0.32 No 37 52.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131898086 + NM_005732 RAD50 0 . . . 0.37 72.93 16 4.72 No 12 -1.98 No 0 0 No -20 0.63 No 52 24.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59806220 - NM_032043 BRIP1 0 . . . 0.41 0 22 6.3 Yes 54 0.31 No 0 0 No -21 0.92 Yes 42 74.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190654847 + NM_000534 PMS1 0 . . . 4.47 65.35 44 7.26 Yes -3 0.03 No 0 0 No -43 0.56 No 49 69.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21969735 - NM_000077 CDKN2A 0 . . . 0.74 0 11 4.09 No 44 -2.17 No 0 0 No -41 0.39 No 40 31.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105171614 + NM_021930 RINT1 0 . . . 3.12 0 45 7.45 Yes 62 0.16 No 0 0 No -32 0.8 Yes 10 64.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68617188 + NM_133509 RAD51B 0 . . . 7.1 75.9 22 5.4 No 32 0.62 No 0 0 No -21 0.91 Yes 43 51.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69135454 + NM_133509 RAD51B 0 . . . 9.37 86.94 23 6 Yes 20 0.46 No 0 0 No -22 0.6 No 38 95.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108113028 + NM_000051 ATM 0 . . . 1.54 57.24 22 6.07 Yes 14 -2.56 No 0 0 No -21 0.6 No 44 33.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69092234 + NM_133509 RAD51B 0 . . . 2.93 84.79 42 5.54 No 2 1.51 Yes 0 0 No -24 0.68 Yes 24 31.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37094203 + NM_000249 MLH1 0 . . . 0.92 0 27 7.62 Yes 36 0.55 No 0 0 No -26 0.94 Yes 46 40.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131956171 + NM_005732 RAD50 0 . . . 0.82 73.73 17 4.58 No 47 0.52 No 0 0 No -16 0.59 No 15 81.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108179582 + NM_000051 ATM 0 . . . 6.45 83.25 25 5.1 No 63 0.62 No 0 0 No -27 0.93 Yes 39 81.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59913850 - NM_032043 BRIP1 0 . . . 4.89 83.21 20 6.81 Yes 23 1.12 Yes 0 0 No -19 0.6 No 35 51.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29128365 - NM_001005735 CHEK2 0 . . . 0.32 74.68 17 4.93 No 4 0.1 No 0 0 No -22 0.88 Yes 54 85.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47656488 + NM_000251 MSH2 0 . . . 3.01 0 25 5.37 No 22 0.55 No 0 0 No -24 0.86 Yes 36 92.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190733149 + NM_000534 PMS1 0 . . . 3.76 81.62 38 6.16 Yes 3 1.55 Yes 0 0 No -23 0.85 Yes 52 50.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108232114 + NM_000051 ATM 0 . . . 0.09 0 35 5.9 Yes 29 -3.25 No 0 0 No -34 0.8 Yes 38 32.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68866590 + NM_133509 RAD51B 0 . . . 1.99 0 9 3.87 No 14 0.29 No 0 0 No -47 0.72 Yes 40 50.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47667044 + NM_000251 MSH2 0 . . . 6.45 84.15 27 5.2 No 6 0.93 Yes 0 0 No -56 0.24 No 47 77.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131920924 + NM_005732 RAD50 0 . . . 1.85 70.45 18 5.83 Yes -2 0.44 No 0 0 No -27 0.71 Yes 48 37.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68764978 + NM_133509 RAD51B 0 . . . 0.74 65.71 25 6.11 Yes 72 -5.84 No 0 0 No -29 0.56 No 59 34.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94164556 - NM_005591 MRE11 0 . . . 3.86 85.91 41 7.99 Yes 14 0.09 No 0 0 No -25 0.63 No 51 50.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215638216 - NM_000465 BARD1 0 . . . 1.16 65.25 21 4.88 No 43 1.14 Yes 0 0 No -23 0.69 Yes 15 73.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131906414 + NM_005732 RAD50 0 . . . 4.45 85.71 24 6.08 Yes 6 1.04 Yes 0 0 No -23 0.96 Yes 48 44.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68851188 + NM_004360 CDH1 0 . . . 4.01 80.66 25 6.78 Yes 42 -1.46 No 0 0 No -24 0.94 Yes 47 49.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68693146 + NM_133509 RAD51B 0 . . . 4.77 69.89 22 5.27 No 63 0.62 No 0 0 No -28 0.49 No 24 78.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94226438 - NM_005591 MRE11 0 . . . 5.14 87.71 17 6.19 Yes 41 -3.14 No 0 0 No -23 0.53 No 49 65.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48010411 + NM_000179 MSH6 0 . . . 2.05 74.38 22 7.56 Yes 72 -5.71 No 0 0 No -17 0.36 No 55 46.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21992462 - NM_000077 CDKN2A 0 . . . 5.77 79.27 50 5.35 No 31 0.3 No 0 0 No -49 0.38 No 50 59.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68824948 + NM_004360 CDH1 0 . . . 5.33 81.38 27 5.2 No 1 2.01 Yes 0 0 No -49 0.78 Yes 57 53.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59852863 - NM_032043 BRIP1 0 . . . 3.77 65.65 17 5.57 Yes 5 0.58 No 0 0 No -16 0.56 No 53 46.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6039942 - NM_000535 PMS2 0 . . . 0.48 0 20 5.1 No 55 -1.69 No 0 0 No -19 0.52 No 50 30.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32932584 + NM_000059 BRCA2 0 . . . 0.19 82.81 19 4.95 No 58 -3.89 No 0 0 No -18 0.47 No 54 51.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108225136 + NM_000051 ATM 0 . . . 1.4 0 21 4.8 No 11 -1.65 No 0 0 No -19 0.32 No 51 91.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41253042 - NM_007294 BRCA1 0 . . . 3.49 80.51 11 4.12 No 54 1.03 Yes 0 0 No -26 0.93 Yes 36 71.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108163034 + NM_000051 ATM 0 . . . 8.97 85.62 22 5.29 No 61 -2.5 No 0 0 No -25 0.42 No 42 61.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68302848 + NM_133509 RAD51B 0 . . . 4.39 76.03 30 7.34 Yes 7 0.49 No 0 0 No -29 0.57 No 42 81.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41231856 - NM_007294 BRCA1 0 . . . 2.21 74.29 22 5.1 No 69 1.34 Yes 0 0 No -24 0.71 Yes 46 73.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190702794 + NM_000534 PMS1 0 . . . 2.53 63.59 9 3.07 No 34 0.78 Yes 0 0 No -33 0.48 No 31 65.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152374164 - NM_005431 XRCC2 0 . . . 4.25 90.72 20 5.05 No 53 1.54 Yes 0 0 No -19 0.46 No 45 58.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68788249 + NM_133509 RAD51B 0 . . . 4.03 77.02 37 7 Yes 6 1.36 Yes 0 0 No -29 0.49 No 52 89.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32961505 + NM_000059 BRCA2 0 . . . 0.66 64.99 33 5.59 Yes 2 0.15 No 0 0 No -26 0.73 Yes 40 18.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68337651 + NM_133509 RAD51B 0 . . . 0.68 60.08 14 4.03 No 42 -3.27 No 0 0 No -13 0.36 No 58 38.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84391251 - NM_139076 FAM175A 0 . . . 4.93 80.49 21 6.37 Yes 41 0.85 Yes 0 0 No -29 0.6 No 40 93.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59846735 - NM_032043 BRIP1 0 . . . 2.41 0 35 6.39 Yes 73 0.33 No 0 0 No -34 0.72 Yes 53 73.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68485126 + NM_133509 RAD51B 0 . . . 6.36 84.98 30 4.73 No 2 0.98 Yes 0 0 No -29 0.66 Yes 38 33.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68764887 + NM_133509 RAD51B 0 . . . 0.76 70.71 16 6.56 Yes 59 -4.62 No 0 0 No -26 0.87 Yes 41 52.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68498843 + NM_133509 RAD51B 0 . . . 5.59 75.88 12 5.48 No 14 1.17 Yes 0 0 No -25 0.71 Yes 44 91.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89665839 + NM_000314 PTEN 0 . . . 5.81 0 12 4.8 No 70 0.15 No 0 0 No -18 0.51 No 47 73.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47731114 + NM_000251 MSH2 0 . . . 6.55 82.1 21 5.48 No 37 -1.88 No 0 0 No -36 0.75 Yes 48 61.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215644801 - NM_000465 BARD1 0 . . . 2.06 75.93 34 4.11 No 24 0.13 No 0 0 No -20 0.81 Yes 50 76.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68657939 + NM_133509 RAD51B 0 . . . 7.15 88.57 35 5.63 Yes 16 0.25 No 0 0 No -34 0.85 Yes 42 95.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94164072 - NM_005591 MRE11 0 . . . 0.76 60.1 16 4.69 No 18 0.13 No 0 0 No -40 0.51 No 40 81.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1211313 + NM_000455 STK11 0 . . . 0.15 55.7 37 7.34 Yes 68 -2.86 No 0 0 No -40 0.32 No 41 44.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108096073 + NM_000051 ATM 0 . . . 3.82 75.89 19 5 No 53 0.64 No 0 0 No -26 0.51 No 47 80.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68964369 + NM_133509 RAD51B 0 . . . 0.76 64.28 30 6 Yes 40 0.06 No 0 0 No -57 0.94 Yes 41 79.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68917926 + NM_133509 RAD51B 0 . . . 3.01 82.01 33 7.74 Yes 76 -5.52 No 0 0 No -32 0.56 No 45 49.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105185012 + NM_021930 RINT1 0 . . . 1.92 63.49 32 5.92 Yes 45 0.96 Yes 0 0 No -31 0.64 No 39 42.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59759432 - NM_032043 BRIP1 0 . . . 1.44 72.13 22 4.8 No 15 1.48 Yes 0 0 No -22 0.32 No 43 83.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59789841 - NM_032043 BRIP1 0 . . . 0.72 74.68 23 7.51 Yes 4 0.12 No 0 0 No -22 0.79 Yes 54 80.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68895641 + NM_133509 RAD51B 0 . . . 6.34 77.21 29 4.26 No 24 1.91 Yes 0 0 No -23 0.87 Yes 34 87.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84404180 - NM_139076 FAM175A 0 . . . 4.17 82.78 32 6.55 Yes 30 1.73 Yes 0 0 No -31 0.74 Yes 48 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190734591 + NM_000534 PMS1 0 . . . 7.66 82.84 26 5.1 No 57 0.72 No 0 0 No -25 0.93 Yes 45 76.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47800535 + NM_000251 MSH2 0 . . . 7.47 79.49 17 6.24 Yes 64 0.62 No 0 0 No -20 0.59 No 53 81.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108160253 + NM_000051 ATM 0 . . . 0.4 68.65 39 6.05 Yes 45 0.67 No 0 0 No -28 0.29 No 41 22.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68645831 + NM_133509 RAD51B 0 . . . 8.54 76.96 47 6.73 Yes 13 1.32 Yes 0 0 No -37 0.59 No 45 54.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47690463 + NM_000251 MSH2 0 . . . 0.41 61.17 21 4.88 No 51 0.99 Yes 0 0 No -20 0.63 No 39 60.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75495606 - NM_001040108 MLH3 0 . . . 3.68 70.85 23 7.34 Yes 23 1.58 Yes 0 0 No -22 0.85 Yes 40 62.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68642860 + NM_133509 RAD51B 0 . . . 3.76 65.02 32 5.9 Yes -2 0.5 No 0 0 No -31 0.88 Yes 43 88.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41207472 - NM_007294 BRCA1 0 . . . 1.89 75.18 46 7.92 Yes 33 0.68 No 0 0 No -31 0.36 No 24 60.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41232878 - NM_007294 BRCA1 0 . . . 1.18 67.59 16 4.36 No 76 0.88 Yes 0 0 No -46 0.53 No 12 51.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190742520 + NM_000534 PMS1 0 . . . 1.65 74.91 16 4.66 No 14 0.45 No 0 0 No -20 0.68 Yes 44 93.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68703427 + NM_133509 RAD51B 0 . . . 2.07 72.61 11 4.12 No 25 1.42 Yes 0 0 No -40 0.4 No 33 71.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68929344 + NM_133509 RAD51B 0 . . . 3.03 82.45 25 6.36 Yes 5 0.7 No 0 0 No -24 0.78 Yes 53 60.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59917077 - NM_032043 BRIP1 0 . . . 2.05 66.05 24 7.84 Yes 28 0.5 No 0 0 No -27 0.53 No 37 65.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47692400 + NM_000251 MSH2 0 . . . 4.46 68.38 36 6.48 Yes -2 0.55 No 0 0 No -32 0.54 No 45 82.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89704596 + NM_000314 PTEN 0 . . . 4.04 78.97 23 5.86 Yes 51 1.63 Yes 0 0 No -22 0.82 Yes 49 89.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56803324 + NM_058216 RAD51C 0 . . . 4.65 80.71 12 4.69 No 15 0.08 No 0 0 No -45 0.87 Yes 43 40.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68744144 + NM_133509 RAD51B 0 . . . 2.16 85.99 19 4.8 No 71 0.94 Yes 0 0 No -43 0.52 No 42 90.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68400467 + NM_133509 RAD51B 0 . . . 7.19 83.85 35 6.04 Yes 51 0.43 No 0 0 No -20 0.6 No 36 51.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68296261 + NM_133509 RAD51B 0 . . . 0.7 72.61 45 7.62 Yes 60 1.67 Yes 0 0 No -28 0.32 No 50 62.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47674046 + NM_000251 MSH2 0 . . . 2.17 80.12 40 5.96 Yes 7 0.83 Yes 0 0 No -27 0.86 Yes 51 89.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75496893 - NM_001040108 MLH3 0 . . . 0.23 67.6 18 5.44 No 30 0.99 Yes 0 0 No -17 0.39 No 54 60.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47749976 + NM_000251 MSH2 0 . . . 2.07 71.94 23 4.8 No 57 -4.44 No 0 0 No -22 0.58 No 48 62.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131912864 + NM_005732 RAD50 0 . . . 1.92 81.56 17 4.58 No 27 0.53 No 0 0 No -16 0.79 Yes 31 78.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90988266 - NM_002485 NBN 0 . . . 3.58 82.62 23 6.15 Yes 10 0.56 No 0 0 No -22 0.74 Yes 48 84.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32949629 + NM_000059 BRCA2 0 . . . 3.21 80.18 30 6.26 Yes 62 0.85 Yes 0 0 No -29 0.93 Yes 46 74.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84387211 - NM_139076 FAM175A 0 . . . 4.73 75.82 21 5.06 No -2 0.76 No 0 0 No -45 0.87 Yes 42 61.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190742951 + NM_000534 PMS1 0 . . . 5.92 82.31 24 7.37 Yes 58 1.16 Yes 0 0 No -24 0.39 No 55 47.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29136792 - NM_001005735 CHEK2 0 . . . 6.11 79.05 17 6.4 Yes 5 1.15 Yes 0 0 No -16 0.7 Yes 40 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108154628 + NM_000051 ATM 0 . . . 1.19 0 42 6.16 Yes 39 0.01 No 0 0 No -22 0.79 Yes 47 78.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215655078 - NM_000465 BARD1 0 . . . 5.24 78.07 20 4.62 No 48 -2.75 No 0 0 No -28 0.56 No 47 58.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59906615 - NM_032043 BRIP1 0 . . . 3.16 74.43 21 5.2 No 0 1.08 Yes 0 0 No -23 0.65 No 51 88.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68733701 + NM_133509 RAD51B 0 . . . 8.38 79.91 35 5.99 Yes -3 0.18 No 0 0 No -34 0.66 Yes 44 88.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59774597 - NM_032043 BRIP1 0 . . . 1.84 85.37 28 6.16 Yes 76 1.25 Yes 0 0 No -27 0.68 Yes 50 60.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59818717 - NM_032043 BRIP1 0 . . . 2.44 81.12 36 6.88 Yes 37 -3.96 No 0 0 No -35 0.76 Yes 51 27.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94196051 - NM_005591 MRE11 0 . . . 7.06 79.52 38 4.55 No 7 0.14 No 0 0 No -37 0.5 No 32 80.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47792401 + NM_000251 MSH2 0 . . . 3.4 71.09 23 4.69 No 23 0.75 No 0 0 No -22 0.71 Yes 44 96.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68501435 + NM_133509 RAD51B 0 . . . 1.92 68.31 37 6 Yes 38 0.72 No 0 0 No -26 0.65 No 20 51.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59776962 - NM_032043 BRIP1 0 . . . 1.29 69.13 18 5.82 Yes 19 0.89 Yes 0 0 No -27 0.64 No 30 40.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68819115 + NM_004360 CDH1 0 . . . 4.12 84.41 24 6.22 Yes 18 0.12 No 0 0 No -23 0.86 Yes 44 54.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68408245 + NM_133509 RAD51B 0 . . . 1.92 66.83 50 7.3 Yes 13 1.04 Yes 0 0 No -26 0.69 Yes 45 95.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48023410 + NM_000179 MSH6 0 . . . 5.57 85.76 21 6.16 Yes 13 0.07 No 0 0 No -20 0.88 Yes 45 57.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84396390 - NM_139076 FAM175A 0 . . . 1.75 61.68 16 4.59 No 13 0.12 No 0 0 No -22 0.71 Yes 45 75.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59897756 - NM_032043 BRIP1 0 . . . 4.23 72.19 23 4.7 No 56 0.81 Yes 0 0 No -22 0.74 Yes 43 70.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68429989 + NM_133509 RAD51B 0 . . . 5.24 82.42 21 4.48 No 28 0.68 No 0 0 No -21 0.64 No 46 66.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23621357 - NM_024675 PALB2 0 . . . 7.92 83.53 24 4.94 No -1 1.64 Yes 0 0 No -23 0.71 Yes 40 69.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68936933 + NM_133509 RAD51B 0 . . . 1.31 64.99 56 8.79 Yes 30 -3.03 No 0 0 No -26 0.31 No 49 48.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37057431 + NM_000249 MLH1 0 . . . 7.33 91.93 20 6.07 Yes 28 -1.82 No 0 0 No -29 0.25 No 53 85.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47754268 + NM_000251 MSH2 0 . . . 5.15 69.99 40 6.86 Yes 15 0.76 No 0 0 No -21 0.54 No 43 58.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69146775 + NM_133509 RAD51B 0 . . . 6.93 85.06 34 5.82 Yes 30 0.63 No 0 0 No -33 0.32 No 28 43.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47650699 + NM_000251 MSH2 0 . . . 2.19 73.72 18 4.76 No -3 0.59 No 0 0 No -22 0.4 No 36 36.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47801232 + NM_000251 MSH2 0 . . . 0.48 64.63 35 5.04 No 16 -1.53 No 0 0 No -37 0.53 No 42 86.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84393869 - NM_139076 FAM175A 0 . . . 1.34 72.19 29 5.56 Yes 65 0.79 Yes 0 0 No -28 0.6 No 47 41.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108197736 + NM_000051 ATM 0 . . . 5.12 85.02 54 5.33 No 6 1.12 Yes 0 0 No -36 0.7 Yes 52 78.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69036774 + NM_133509 RAD51B 0 . . . 4.77 74.5 35 5.89 Yes 5 1.42 Yes 0 0 No -22 0.5 No 53 79.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68772085 + NM_133509 RAD51B 0 . . . 3.32 70.16 24 3.83 No 76 -3.44 No 0 0 No -23 0.86 Yes 39 80.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131960104 + NM_005732 RAD50 0 . . . 6.66 76.58 37 7.02 Yes -1 0.91 Yes 0 0 No -36 0.63 No 17 58.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90991167 - NM_002485 NBN 0 . . . 6.02 72.78 47 8.38 Yes 14 1.27 Yes 0 0 No -29 0.78 Yes 33 78.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47734335 + NM_000251 MSH2 0 . . . 0.01 74.23 14 4.82 No 37 -2.13 No 0 0 No -27 0.8 Yes 54 82.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68492622 + NM_133509 RAD51B 0 . . . 7.43 85.08 41 6.35 Yes 16 1.11 Yes 0 0 No -35 0.69 Yes 42 90.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190727704 + NM_000534 PMS1 0 . . . 0.44 75.93 27 4.91 No 67 1.53 Yes 0 0 No -26 0.69 Yes 15 50.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56771600 + NM_058216 RAD51C 0 . . . 1.21 0 25 7.42 Yes 43 -2.54 No 0 0 No -32 0.41 No 46 76.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41210733 - NM_007294 BRCA1 0 . . . 6.25 83.09 12 4.87 No 64 0.52 No 0 0 No -42 0.82 Yes 50 69.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68511839 + NM_133509 RAD51B 0 . . . 0.72 74.68 19 4.03 No 61 0.21 No 0 0 No -19 0.71 Yes 36 53.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68570470 + NM_133509 RAD51B 0 . . . 8.09 84.04 49 6.5 Yes -2 0.34 No 0 0 No -24 0.43 No 51 33.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68351658 + NM_133509 RAD51B 0 . . . 1.47 0 26 5.17 No 9 0.15 No 0 0 No -25 0.86 Yes 49 46.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68927327 + NM_133509 RAD51B 0 . . . 2.83 72.41 30 4.99 No 13 -0.85 No 0 0 No -29 0.79 Yes 57 30.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41209977 - NM_007294 BRCA1 0 . . . 3.17 75.22 32 5.74 Yes 76 0.85 Yes 0 0 No -26 0.55 No 47 76.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68384583 + NM_133509 RAD51B 0 . . . 7.72 83.83 17 4.8 No 49 -3.49 No 0 0 No -40 0.62 No 39 54.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131949610 + NM_005732 RAD50 0 . . . 4.17 78.16 29 5.38 No 71 0.93 Yes 0 0 No -28 0.59 No 50 76.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68617939 + NM_133509 RAD51B 0 . . . 2.41 0 13 4.73 No 17 0.82 Yes 0 0 No -24 0.52 No 41 88.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94154512 - NM_005591 MRE11 0 . . . 1.6 80.3 21 5.59 Yes 23 0.12 No 0 0 No -20 0.72 Yes 49 79.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6043090 - NM_000535 PMS2 0 . . . 1.96 75.18 17 5.14 No 72 -4.26 No 0 0 No -22 0.79 Yes 43 58.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68656476 + NM_133509 RAD51B 0 . . . 4.68 81.15 25 5.39 No 7 0.74 No 0 0 No -22 0.72 Yes 51 89.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69029194 + NM_133509 RAD51B 0 . . . 2.95 77.02 28 5.83 Yes 37 0.32 No 0 0 No -27 0.63 No 41 72.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68398243 + NM_133509 RAD51B 0 . . . 3.01 0 24 5.04 No 62 0.47 No 0 0 No -23 0.4 No 24 60.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47739220 + NM_000251 MSH2 0 . . . 3.22 70.73 16 5.96 Yes 25 0.45 No 0 0 No -29 0.89 Yes 33 95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190743940 + NM_000534 PMS1 0 . . . 5.68 85.15 16 4 No 62 -0.25 No 0 0 No -16 0.51 No 33 55.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59905037 - NM_032043 BRIP1 0 . . . 0.05 73 16 5.97 Yes 28 0.78 Yes 0 0 No -28 0.46 No 54 52.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68293841 + NM_133509 RAD51B 0 . . . 5.51 76.04 27 6.27 Yes 6 0.77 No 0 0 No -26 0.96 Yes 39 68.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89677420 + NM_000314 PTEN 0 . . . 4.27 0 21 4.46 No 76 2.82 Yes 0 0 No -24 0.44 No 39 50.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68676795 + NM_133509 RAD51B 0 . . . 2.56 87 18 5.02 No 76 0.96 Yes 0 0 No -21 0.8 Yes 50 54.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68843340 + NM_004360 CDH1 0 . . . 4.74 82.31 29 6.19 Yes 59 1.07 Yes 0 0 No -28 0.64 No 54 70.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47733407 + NM_000251 MSH2 0 . . . 0.65 73.56 23 5.83 Yes 54 -4.09 No 0 0 No -30 0.41 No 44 56.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68758172 + NM_133509 RAD51B 0 . . . 0.05 78.4 21 5.47 No 13 1.5 Yes 0 0 No -27 0.68 Yes 45 81.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131912862 + NM_005732 RAD50 0 . . . 9.98 82.97 31 5.46 No 25 0.52 No 0 0 No -25 0.74 Yes 33 73.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68946232 + NM_133509 RAD51B 0 . . . 0.22 72.01 44 9.13 Yes 60 1.06 Yes 0 0 No -43 0.66 Yes 19 15.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94216403 - NM_005591 MRE11 0 . . . 1.4 74.34 21 5.2 No 36 1.43 Yes 0 0 No -20 0.61 No 51 51.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68443019 + NM_133509 RAD51B 0 . . . 3.44 62.93 23 4.56 No 75 0.52 No 0 0 No -22 0.36 No 50 53.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59850754 - NM_032043 BRIP1 0 . . . 3.82 76.62 23 4.78 No 1 0.36 No 0 0 No -22 0.65 No 42 48.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29114146 - NM_001005735 CHEK2 0 . . . 7.54 68.49 27 5.57 Yes 12 0.98 Yes 0 0 No -26 0.66 No 46 89.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47771892 + NM_000251 MSH2 0 . . . 1.4 0 46 6.74 Yes 72 1.86 Yes 0 0 No -22 0.91 Yes 25 75.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131939241 + NM_005732 RAD50 0 . . . 2.33 68.65 27 5.74 Yes 19 0.38 No 0 0 No -30 0.62 No 41 31.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215634273 - NM_000465 BARD1 0 . . . 1.11 74.76 17 4.82 No 19 -3.36 No 0 0 No -22 0.82 Yes 22 47.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215653784 - NM_000465 BARD1 0 . . . 5.68 81.16 21 3.65 No 1 1.32 Yes 0 0 No -20 0.65 No 50 35.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108192952 + NM_000051 ATM 0 . . . 2.62 73.61 17 4.8 No 3 -0.81 No 0 0 No -24 0.2 No 49 64.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108140036 + NM_000051 ATM 0 . . . 5.19 65.63 26 6.7 Yes 18 -3.13 No 0 0 No -25 0.86 Yes 44 82.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68703894 + NM_133509 RAD51B 0 . . . 5.42 83.3 25 6.16 Yes 0 0.46 No 0 0 No -24 0.95 Yes 49 75.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68391608 + NM_133509 RAD51B 0 . . . 0.81 0 16 5.39 No 66 0.62 No 0 0 No -22 0.55 No 50 85.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59828132 - NM_032043 BRIP1 0 . . . 7.1 86.74 31 6.41 Yes 49 0.85 Yes 0 0 No -31 0.59 No 50 86.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75500812 - NM_001040108 MLH3 0 . . . 1.06 68.95 27 5.2 No 58 1.43 Yes 0 0 No -26 0.65 No 42 90.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215592075 - NM_000465 BARD1 0 . . . 1.53 74.99 39 4.81 No 45 0.16 No 0 0 No -27 0.32 No 62 32.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105194286 + NM_021930 RINT1 0 . . . 5.07 84.22 41 7.32 Yes 33 1.05 Yes 0 0 No -40 0.83 Yes 50 92.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68886645 + NM_133509 RAD51B 0 . . . 6.55 89.05 31 5.39 No 23 0.53 No 0 0 No -30 0.72 Yes 44 57.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68414023 + NM_133509 RAD51B 0 . . . 0.29 63.69 29 5.38 No 30 0.23 No 0 0 No -28 0.91 Yes 17 36.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131955805 + NM_005732 RAD50 0 . . . 1.89 72.26 32 8.43 Yes 31 1.04 Yes 0 0 No -31 0.54 No 27 48.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68607551 + NM_133509 RAD51B 0 . . . 0.15 0 28 4.92 No 52 0.88 Yes 0 0 No -22 0.61 No 54 88.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48012835 + NM_000179 MSH6 0 . . . 0.86 69.78 33 5.81 Yes 66 0.53 No 0 0 No -20 0.46 No 42 64.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89705474 + NM_000314 PTEN 0 . . . 4.91 79.38 27 5.2 No 37 -2.08 No 0 0 No -26 0.84 Yes 46 36.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90959255 - NM_002485 NBN 0 . . . 7.01 81.86 27 6.37 Yes 29 2.42 Yes 0 0 No -38 0.65 No 29 93.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6023955 - NM_000535 PMS2 0 . . . 6.79 90.86 45 4.81 No 41 0.75 No 0 0 No -41 0.62 No 44 73.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68628793 + NM_133509 RAD51B 0 . . . 5.01 81.34 23 6.06 Yes 52 -2.16 No 0 0 No -22 0.89 Yes 45 51.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32902652 + NM_000059 BRCA2 0 . . . 2.3 83.69 41 8.31 Yes 33 1.52 Yes 0 0 No -33 0.48 No 48 95.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68308566 + NM_133509 RAD51B 0 . . . 1.02 72.05 19 4.99 No -2 1.18 Yes 0 0 No -38 0.47 No 45 47.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68627623 + NM_133509 RAD51B 0 . . . 0.52 64.34 14 5.82 Yes 29 -2.66 No 0 0 No -30 0.62 No 48 69.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89637059 + NM_000314 PTEN 0 . . . 4.37 69.81 29 5.65 Yes 38 1.41 Yes 0 0 No -28 0.61 No 20 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68291446 + NM_133509 RAD51B 0 . . . 0.37 0 44 6.93 Yes 15 0.03 No 0 0 No -28 0.67 Yes 34 72.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215602831 - NM_000465 BARD1 0 . . . 1.77 71.5 36 6.09 Yes 67 -3.85 No 0 0 No -31 0.52 No 48 30.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69040782 + NM_133509 RAD51B 0 . . . 5.39 78.5 15 5.07 No 44 0.99 Yes 0 0 No -28 0.73 Yes 36 71.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89658878 + NM_000314 PTEN 0 . . . 0.3 0 16 4.58 No 36 0.88 Yes 0 0 No -45 0.36 No 22 94.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108117004 + NM_000051 ATM 0 . . . 7.92 92.69 15 4 No 3 1.77 Yes 0 0 No -30 0.63 No 44 86.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68951654 + NM_133509 RAD51B 0 . . . 5.73 85.24 23 6.15 Yes 22 2.04 Yes 0 0 No -22 0.78 Yes 36 96.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68988632 + NM_133509 RAD51B 0 . . . 0.58 65.29 20 4.36 No 52 0.67 No 0 0 No -19 0.53 No 48 23.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68417688 + NM_133509 RAD51B 0 . . . 3.65 75.93 15 5.74 Yes 75 -4.26 No 0 0 No -51 0.59 No 51 51.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32963230 + NM_000059 BRCA2 0 . . . 8.04 0 19 4.35 No 44 0.4 No 0 0 No -18 0.43 No 33 76.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104174924 - NM_001100119 XRCC3 0 . . . 2.53 76.07 15 4.73 No 2 2.04 Yes 0 0 No -26 0.49 No 47 52.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69011762 + NM_133509 RAD51B 0 . . . 7.43 82.26 28 5.76 Yes 76 -3.15 No 0 0 No -27 0.94 Yes 50 40.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94188597 - NM_005591 MRE11 0 . . . 5.78 87.75 14 4.47 No 76 0.63 No 0 0 No -29 0.25 No 43 59.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68498899 + NM_133509 RAD51B 0 . . . 0.05 74.13 101 9.86 Yes 70 1.14 Yes 0 0 No -33 0.7 Yes 60 45.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69027015 + NM_133509 RAD51B 0 . . . 6.24 77.63 22 5.27 No 60 0.31 No 0 0 No -21 0.81 Yes 47 23.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68943567 + NM_133509 RAD51B 0 . . . 5.11 72.37 26 5.45 No 49 -0.17 No 0 0 No -25 0.65 No 29 63.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68940139 + NM_133509 RAD51B 0 . . . 2.27 76.45 18 5.74 Yes 5 -1.08 No 0 0 No -26 0.8 Yes 53 75.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59909996 - NM_032043 BRIP1 0 . . . 3.71 87.04 26 4.37 No 50 1.3 Yes 0 0 No -25 0.69 Yes 46 87.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68504487 + NM_133509 RAD51B 0 . . . 9.66 92.55 26 5.48 No 33 1.35 Yes 0 0 No -25 0.79 Yes 25 77.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32937562 + NM_000059 BRCA2 0 . . . 2.44 0 21 4.53 No 57 -2.66 No 0 0 No -39 0.46 No 44 52.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68781114 + NM_004360 CDH1 0 . . . 2.56 76.71 16 4.79 No 37 0.29 No 0 0 No -20 0.36 No 48 53.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68966586 + NM_133509 RAD51B 0 . . . 4.93 86.71 39 6.36 Yes 39 -3.39 No 0 0 No -23 0.86 Yes 48 86.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75481736 - NM_001040108 MLH3 0 . . . 2.29 0 20 4.89 No 18 1.13 Yes 0 0 No -19 0.62 No 47 68.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68815169 + NM_004360 CDH1 0 . . . 2.29 75.92 26 6.19 Yes 64 1.5 Yes 0 0 No -25 0.7 Yes 50 43.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68720542 + NM_133509 RAD51B 0 . . . 0.02 0 26 5.48 No 71 0.93 Yes 0 0 No -23 0.73 Yes 47 50.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69024000 + NM_133509 RAD51B 0 . . . 3.51 68.56 40 7.2 Yes 71 -6.49 No 0 0 No -39 0.71 Yes 46 75.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68787344 + NM_004360 CDH1 0 . . . 6.14 88.68 13 6.39 Yes 9 1.13 Yes 0 0 No -21 0.58 No 49 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108092647 + NM_000051 ATM 0 . . . 2.53 74.97 17 4.28 No 8 0.85 Yes 0 0 No -28 0.88 Yes 42 65.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7591328 - NM_000546 TP53 0 . . . 0.98 76.53 44 7.58 Yes 68 0.74 No 0 0 No -38 0.47 No 46 58.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68293480 + NM_133509 RAD51B 0 . . . 0.21 0 19 6.47 Yes 5 -0.49 No 0 0 No -35 0.54 No 13 17.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32914700 + NM_000059 BRCA2 0 . . . 3.68 0 51 7.21 Yes 46 0.68 No 0 0 No -16 0.48 No 50 54.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56794622 + NM_058216 RAD51C 0 . . . 0.17 56.46 21 5.45 No 63 -2.76 No 0 0 No -26 0.91 Yes 36 41.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90986287 - NM_002485 NBN 0 . . . 4.26 72.52 36 6.9 Yes 5 -1.38 No 0 0 No -35 0.46 No 46 34.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666630 - NM_000465 BARD1 0 . . . 2.91 77.69 28 4.46 No 57 0.09 No 0 0 No -27 0.89 Yes 39 80.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68312781 + NM_133509 RAD51B 0 . . . 2.85 70.19 28 6.32 Yes 2 0.62 No 0 0 No -27 0.94 Yes 49 77.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152367361 - NM_005431 XRCC2 0 . . . 7.56 83.42 24 5.29 No 18 1.08 Yes 0 0 No -23 0.56 No 40 88.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37036227 + NM_000249 MLH1 0 . . . 5.03 79.98 27 3.84 No 23 0.13 No 0 0 No -26 0.5 No 35 66.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105188358 + NM_021930 RINT1 0 . . . 1.87 80.12 18 5.25 No 6 0.99 Yes 0 0 No -26 0.61 No 52 77.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131969074 + NM_005732 RAD50 0 . . . 1.37 83.52 21 5.55 No 37 1.57 Yes 0 0 No -20 0.72 Yes 53 31.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68804271 + NM_133509 RAD51B 0 . . . 7 79.5 18 5.4 No 15 0.93 Yes 0 0 No -23 0.68 Yes 38 58.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21985274 - NM_000077 CDKN2A 0 . . . 0.43 83.65 9 4.58 No 7 0.58 No 0 0 No -41 0.8 Yes 51 63.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68694604 + NM_133509 RAD51B 0 . . . 8.71 86.22 26 5.05 No 3 0.27 No 0 0 No -25 0.75 Yes 46 95.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69139213 + NM_133509 RAD51B 0 . . . 0.94 79.57 29 7.35 Yes 22 0.14 No 0 0 No -28 0.94 Yes 47 93.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29092306 - NM_001005735 CHEK2 0 . . . 4.28 70.01 22 5.43 No 36 0.47 No 0 0 No -55 0.24 No 25 44.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32972953 + NM_000059 BRCA2 0 . . . 5.21 85.51 21 7.21 Yes 5 1.75 Yes 0 0 No -20 0.67 Yes 49 43.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131932750 + NM_005732 RAD50 0 . . . 4.15 75.32 15 3.66 No -2 0.58 No 0 0 No -56 0.71 Yes 47 61.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23651299 - NM_024675 PALB2 0 . . . 0.13 75.44 13 6.16 Yes 67 -5.43 No 0 0 No -51 0.41 No 46 43.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89727779 + NM_000314 PTEN 0 . . . 4.92 75.78 34 5.36 No 42 0.57 No 0 0 No -33 0.41 No 43 70.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47758498 + NM_000251 MSH2 0 . . . 4.31 67.41 22 5.83 Yes 28 -3.02 No 0 0 No -21 0.85 Yes 36 78.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56801755 + NM_058216 RAD51C 0 . . . 0.07 60.42 21 4.69 No -3 0.31 No 0 0 No -20 0.87 Yes 46 80.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108216349 + NM_000051 ATM 0 . . . 1.27 0 25 5.97 Yes 23 0.7 No 0 0 No -31 0.65 No 24 54.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68323677 + NM_133509 RAD51B 0 . . . 3.05 75.09 46 5.32 No 47 0.87 Yes 0 0 No -29 0.41 No 36 72.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41248691 - NM_007294 BRCA1 0 . . . 4.2 70.86 17 5.29 No 59 1 Yes 0 0 No -21 0.69 Yes 26 88.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89633017 + NM_000314 PTEN 0 . . . 2.61 72.1 18 5.3 No 20 0.05 No 0 0 No -28 0.42 No 38 69.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69004386 + NM_133509 RAD51B 0 . . . 3.28 0 20 4.69 No 19 0.41 No 0 0 No -19 0.87 Yes 39 82.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59803017 - NM_032043 BRIP1 0 . . . 3.02 74.93 23 6.02 Yes 27 0.54 No 0 0 No -22 0.85 Yes 38 50.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37041490 + NM_000249 MLH1 0 . . . 0.97 82.86 20 5.45 No 13 1.57 Yes 0 0 No -29 0.87 Yes 50 77.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47733744 + NM_000251 MSH2 0 . . . 4.5 87.21 46 5.47 No 63 0.57 No 0 0 No -24 0.96 Yes 46 66.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68827202 + NM_004360 CDH1 0 . . . 5 69.88 28 5.23 No 73 0.97 Yes 0 0 No -27 0.53 No 45 87.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47743625 + NM_000251 MSH2 0 . . . 6.72 77.81 17 6.9 Yes 46 0.73 No 0 0 No -34 0.72 Yes 42 78.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68807072 + NM_133509 RAD51B 0 . . . 1.32 60.72 16 5.04 No 51 0.57 No 0 0 No -20 0.71 Yes 53 61.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94180594 - NM_005591 MRE11 0 . . . 0.62 0 39 7.73 Yes 33 1.2 Yes 0 0 No -38 0.71 Yes 25 97.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47672883 + NM_000251 MSH2 0 . . . 6.61 85.4 15 6.08 Yes 35 -3.21 No 0 0 No -19 0.56 No 42 51.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68590942 + NM_133509 RAD51B 0 . . . 2.65 71.69 27 5.29 No 48 -4.46 No 0 0 No -21 0.67 Yes 53 83.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47803692 + NM_000251 MSH2 0 . . . 3.07 65.67 32 5.65 Yes 49 0.54 No 0 0 No -46 0.44 No 40 46.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108192228 + NM_000051 ATM 0 . . . 2.06 61.61 28 5.83 Yes 53 0.83 Yes 0 0 No -27 0.84 Yes 47 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68461598 + NM_133509 RAD51B 0 . . . 1.48 66.04 32 5.91 Yes 51 1.27 Yes 0 0 No -31 0.41 No 50 18.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104163202 - NM_001100119 XRCC3 0 . . . 7.95 73.63 26 4.81 No 1 2.15 Yes 0 0 No -25 0.61 No 50 44.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68960474 + NM_133509 RAD51B 0 . . . 6.19 83.29 14 4.9 No 58 1.14 Yes 0 0 No -49 0.61 No 44 65.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47659054 + NM_000251 MSH2 0 . . . 1.87 76.63 32 6.14 Yes 67 -4.73 No 0 0 No -31 0.79 Yes 48 77.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56809420 + NM_058216 RAD51C 0 . . . 3.67 77.18 17 5.47 No 75 -4.68 No 0 0 No -31 0.51 No 48 49.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41277566 - NM_007294 BRCA1 0 . . . 3.45 70.23 19 3.92 No 40 0.43 No 0 0 No -26 0.42 No 18 79.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190666048 + NM_000534 PMS1 0 . . . 5.2 86.87 15 5.72 Yes 63 1.3 Yes 0 0 No -26 0.72 Yes 45 77.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108152568 + NM_000051 ATM 0 . . . 5.46 87.63 23 4.7 No 62 0.84 Yes 0 0 No -22 0.51 No 46 61.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94153953 - NM_005591 MRE11 0 . . . 3.93 69.13 28 5.43 No 21 1.71 Yes 0 0 No -27 0.81 Yes 37 71.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190680833 + NM_000534 PMS1 0 . . . 2.31 75.26 19 4.97 No 2 1.45 Yes 0 0 No -27 0.85 Yes 43 45.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90963588 - NM_002485 NBN 0 . . . 6.61 82.77 28 4.12 No 6 1.66 Yes 0 0 No -27 0.77 Yes 42 75.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68549508 + NM_133509 RAD51B 0 . . . 6.14 81.64 42 6.63 Yes 3 1.68 Yes 0 0 No -39 0.62 No 42 59.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68978945 + NM_133509 RAD51B 0 . . . 1.64 0 20 6.39 Yes 28 1.72 Yes 0 0 No -24 0.37 No 26 43.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68832181 + NM_004360 CDH1 0 . . . 0.49 65.34 18 4.03 No 12 -2.29 No 0 0 No -21 0.54 No 36 72.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68652153 + NM_133509 RAD51B 0 . . . 0.56 74.97 64 8.77 Yes 67 0.11 No 0 0 No -23 0.76 Yes 44 62.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48029708 + NM_000179 MSH6 0 . . . 3.57 71.69 23 3.45 No -3 1.25 Yes 0 0 No -23 0.37 No 53 40.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108099731 + NM_000051 ATM 0 . . . 7.17 79.49 28 4.81 No 66 -6.5 No 0 0 No -27 0.79 Yes 45 50.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68848678 + NM_133509 RAD51B 0 . . . 2.77 66.93 22 5.19 No 72 0.87 Yes 0 0 No -28 0.65 No 43 96.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69076735 + NM_133509 RAD51B 0 . . . 4.69 77.97 21 4.2 No 64 0.26 No 0 0 No -20 0.47 No 27 75.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152361429 - NM_005431 XRCC2 0 . . . 0.42 77.66 17 4.79 No 48 1.2 Yes 0 0 No -46 0.41 No 43 45.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47672049 + NM_000251 MSH2 0 . . . 1.35 63.4 16 4.12 No 45 1.64 Yes 0 0 No -16 0.62 No 38 35.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68504349 + NM_133509 RAD51B 0 . . . 1.65 0 19 5.76 Yes 21 0.38 No 0 0 No -22 0.37 No 41 66.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190697744 + NM_000534 PMS1 0 . . . 4.27 75.13 37 6.48 Yes 49 0.54 No 0 0 No -19 0.66 Yes 27 37.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32946517 + NM_000059 BRCA2 0 . . . 1.43 75.38 42 6.45 Yes 40 0.85 Yes 0 0 No -41 0.79 Yes 50 60.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108175301 + NM_000051 ATM 0 . . . 8.21 80.99 54 7.26 Yes 57 1.18 Yes 0 0 No -38 0.52 No 43 71.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56777759 + NM_058216 RAD51C 0 . . . 2.63 70.1 21 3.48 No 47 0.38 No 0 0 No -23 0.5 No 41 43.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41215847 - NM_007294 BRCA1 0 . . . 5.67 81.87 17 4.8 No 23 0.81 Yes 0 0 No -37 0.79 Yes 35 62.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69092096 + NM_133509 RAD51B 0 . . . 5.03 82.62 32 5.92 Yes 2 0.81 Yes 0 0 No -31 0.53 No 48 83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94222069 - NM_005591 MRE11 0 . . . 5.32 78.28 28 4.8 No 70 0.03 No 0 0 No -40 0.35 No 49 75.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68906445 + NM_133509 RAD51B 0 . . . 8.73 83.84 20 7.14 Yes 35 0.18 No 0 0 No -19 0.64 No 54 59.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68844558 + NM_004360 CDH1 0 . . . 3.99 82.3 15 4.36 No 0 0.78 Yes 0 0 No -18 0.51 No 51 54.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68706992 + NM_133509 RAD51B 0 . . . 6.86 91.72 11 5.92 Yes 70 0.64 No 0 0 No -28 0.83 Yes 48 90.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68400248 + NM_133509 RAD51B 0 . . . 1.21 70.76 12 5.1 No 74 1.5 Yes 0 0 No -24 0.38 No 47 53.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68830686 + NM_133509 RAD51B 0 . . . 4.11 78.49 15 6 Yes 43 -3.99 No 0 0 No -14 0.31 No 45 42.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59812785 - NM_032043 BRIP1 0 . . . 4.7 76.15 24 4.09 No 68 0.69 No 0 0 No -23 0.37 No 46 76.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68290903 + NM_133509 RAD51B 0 . . . 3.69 76.63 22 5.19 No 34 0.8 Yes 0 0 No -22 0.54 No 43 35.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68740078 + NM_133509 RAD51B 0 . . . 6.34 74.64 41 6.3 Yes 15 0.3 No 0 0 No -30 0.36 No 43 69.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68831915 + NM_133509 RAD51B 0 . . . 1.1 0 12 5.39 No 42 0.07 No 0 0 No -28 0.42 No 63 27.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37043781 + NM_000249 MLH1 0 . . . 1.64 0 23 3.92 No 4 1.05 Yes 0 0 No -22 0.47 No 54 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75491701 - NM_001040108 MLH3 0 . . . 0.09 0 20 4.9 No 31 0.4 No 0 0 No -19 0.41 No 27 66.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108234307 + NM_000051 ATM 0 . . . 0.14 67.8 17 4.69 No 41 -4.45 No 0 0 No -34 0.59 No 51 50.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68532404 + NM_133509 RAD51B 0 . . . 7.57 79.03 21 5.53 No NA NA NA 0 0 No -20 0.81 Yes 45 67.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68859820 + NM_004360 CDH1 0 . . . 3.04 78.25 15 5.57 Yes 15 0.12 No 0 0 No -14 0.52 No 48 75.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48016326 + NM_000179 MSH6 0 . . . 3.68 70.85 12 5.39 No 21 1.71 Yes 0 0 No -28 0.38 No 37 60.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68678000 + NM_133509 RAD51B 0 . . . 0.19 0 14 5.01 No 63 1.78 Yes 0 0 No -19 0.45 No 44 52.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108122489 + NM_000051 ATM 0 . . . 3.29 75.07 17 6.04 Yes 35 0.81 Yes 0 0 No -35 0.24 No 46 73.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215635904 - NM_000465 BARD1 0 . . . 5.5 67.31 19 4.08 No 69 1.09 Yes 0 0 No -19 0.68 Yes 41 64.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68939293 + NM_133509 RAD51B 0 . . . 2.42 81.4 32 6.49 Yes 49 0.55 No 0 0 No -25 0.71 Yes 47 14.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1219871 + NM_000455 STK11 0 . . . 1.8 76 16 5.04 No 64 -2.93 No 0 0 No -20 0.51 No 47 30.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190681153 + NM_000534 PMS1 0 . . . 1.5 82 14 4.88 No 9 0.62 No 0 0 No -17 0.56 No 49 83.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40987217 + NM_001164269 RAD51 0 . . . 0.31 68.9 18 4.9 No 35 0.5 No 0 0 No -17 0.29 No 60 65.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7566757 - NM_000546 TP53 0 . . . 1.88 86.31 39 5.73 Yes 8 0.09 No 0 0 No -39 0.59 No 50 54.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68664510 + NM_133509 RAD51B 0 . . . 3.24 78.01 19 4.9 No 6 1.29 Yes 0 0 No -45 0.86 Yes 41 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52443584 - NM_004656 BAP1 0 . . . 0.02 81.91 30 4.46 No 73 1.01 Yes 0 0 No -26 0.52 No 41 18.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68918858 + NM_133509 RAD51B 0 . . . 1.72 69.56 29 5.91 Yes 1 0.81 Yes 0 0 No -26 0.57 No 57 64.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68595247 + NM_133509 RAD51B 0 . . . 5.04 82.22 23 3.7 No 6 0.64 No 0 0 No -22 0.35 No 44 70.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68940469 + NM_133509 RAD51B 0 . . . 3.97 70.57 27 5.8 Yes 53 0.95 Yes 0 0 No -26 0.74 Yes 43 57.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131896546 + NM_005732 RAD50 0 . . . 4.57 76.59 19 5.66 Yes -3 0.28 No 0 0 No -25 0.59 No 31 38.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68306044 + NM_133509 RAD51B 0 . . . 0.85 81.44 20 7.14 Yes 11 1.15 Yes 0 0 No -19 0.46 No 47 83.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69026282 + NM_133509 RAD51B 0 . . . 3.59 79.66 21 5.12 No 69 1.55 Yes 0 0 No -20 0.67 Yes 51 88.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89669625 + NM_000314 PTEN 0 . . . 2.16 72.53 29 5.39 No 55 1.23 Yes 0 0 No -28 0.86 Yes 18 59.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190709702 + NM_000534 PMS1 0 . . . 0.79 83.85 16 5.39 No 76 1.46 Yes 0 0 No -32 0.81 Yes 50 77.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29113554 - NM_001005735 CHEK2 0 . . . 8.06 87.71 21 4.69 No 13 1.62 Yes 0 0 No -21 0.7 Yes 45 88.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47646248 + NM_000251 MSH2 0 . . . 3.18 85.35 26 6.29 Yes -4 0.67 No 0 0 No -26 0.39 No 43 61.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68868861 + NM_004360 CDH1 0 . . . 0.51 62.09 16 4.69 No 39 0.21 No 0 0 No -20 0.14 No 35 54.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215676127 - NM_000465 BARD1 0 . . . 4.36 74.07 28 6.46 Yes 71 1.72 Yes 0 0 No -27 0.73 Yes 47 72.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68378444 + NM_133509 RAD51B 0 . . . 0.16 74.28 31 5.68 Yes 44 0.6 No 0 0 No -30 0.83 Yes 41 56.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68553604 + NM_133509 RAD51B 0 . . . 0.8 75.41 28 5.24 No 1 1.06 Yes 0 0 No -27 0.56 No 54 92.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41012516 + NM_001164269 RAD51 0 . . . 0.26 62.43 23 6.15 Yes 57 1.15 Yes 0 0 No -22 0.69 Yes 55 46.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48033160 + NM_000179 MSH6 0 . . . 5.04 81.15 22 5.64 Yes 19 0.31 No 0 0 No -21 0.9 Yes 45 58.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68470930 + NM_133509 RAD51B 0 . . . 1.11 63.14 54 5.33 No 59 1.21 Yes 0 0 No -36 0.69 Yes 42 65.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94153514 - NM_005591 MRE11 0 . . . 2.43 68.9 25 4.49 No 74 -4.53 No 0 0 No -19 0.67 Yes 39 53.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90943910 - NM_002485 NBN 0 . . . 8.11 83.44 30 7.8 Yes 19 1.13 Yes 0 0 No -29 0.92 Yes 45 58.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32948046 + NM_000059 BRCA2 0 . . . 5.75 81.77 23 5 No 59 1.52 Yes 0 0 No -22 0.97 Yes 36 69.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94163320 - NM_005591 MRE11 0 . . . 3.3 72.05 27 5.29 No 53 -4.16 No 0 0 No -31 0.79 Yes 50 45.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68801532 + NM_133509 RAD51B 0 . . . 4.07 72.33 26 5.65 Yes 26 0.13 No 0 0 No -25 0.86 Yes 45 75.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52435585 - NM_004656 BAP1 0 . . . 8.07 80.21 16 5.15 No 8 0.88 Yes 0 0 No -35 0.93 Yes 50 72.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215591664 - NM_000465 BARD1 0 . . . 0.48 0 35 6.79 Yes 23 0.45 No 0 0 No -34 0.78 Yes 34 49.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68596878 + NM_133509 RAD51B 0 . . . 4.74 84.11 47 7.08 Yes 11 0.78 Yes 0 0 No -26 0.66 Yes 47 77.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131918206 + NM_005732 RAD50 0 . . . 3.48 59.35 23 4.91 No 59 -1.33 No 0 0 No -22 0.71 Yes 47 58.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215613813 - NM_000465 BARD1 0 . . . 3.24 70.99 25 5.99 Yes 40 -3.26 No 0 0 No -24 0.8 Yes 41 53.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68995410 + NM_133509 RAD51B 0 . . . 3.97 84.41 24 5.31 No 18 1.34 Yes 0 0 No -29 0.58 No 40 79.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68903315 + NM_133509 RAD51B 0 . . . 6.65 87.14 21 5.27 No 57 -1.98 No 0 0 No -20 0.7 Yes 46 80.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68776203 + NM_004360 CDH1 0 . . . 3.91 84.41 35 5.73 Yes 23 0.54 No 0 0 No -25 0.46 No 44 48.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94161043 - NM_005591 MRE11 0 . . . 8.71 85.27 20 3.75 No 49 1.41 Yes 0 0 No -23 0.64 No 25 62.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152358738 - NM_005431 XRCC2 0 . . . 5.87 78.77 21 5.18 No 43 1.92 Yes 0 0 No -24 0.74 Yes 15 63.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89659921 + NM_000314 PTEN 0 . . . 3.14 84.94 15 5.28 No 71 0.33 No 0 0 No -21 0.58 No 20 56.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68540264 + NM_133509 RAD51B 0 . . . 3.56 77.23 34 6.63 Yes 25 1.5 Yes 0 0 No -21 0.5 No 32 68.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75491705 - NM_001040108 MLH3 0 . . . 0.57 74.28 25 5.33 No 27 0.4 No 0 0 No -27 0.66 No 31 82.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47712035 + NM_000251 MSH2 0 . . . 0.38 67.66 39 6.2 Yes 29 -3.43 No 0 0 No -23 0.4 No 45 24.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68809975 + NM_133509 RAD51B 0 . . . 1.29 69 24 5.69 Yes 51 -2.41 No 0 0 No -37 0.2 No 33 53.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59903521 - NM_032043 BRIP1 0 . . . 3.31 75.75 27 6.3 Yes 74 0.28 No 0 0 No -27 0.5 No 46 59.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37043495 + NM_000249 MLH1 0 . . . 3.88 83.27 22 5 No 48 1.87 Yes 0 0 No -21 0.8 Yes 10 74.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68766912 + NM_133509 RAD51B 0 . . . 3.8 73.31 17 6.93 Yes -2 1.8 Yes 0 0 No -29 0.48 No 43 53.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68747164 + NM_133509 RAD51B 0 . . . 4.42 75.29 20 4.8 No 71 0.14 No 0 0 No -19 0.54 No 37 65.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47706514 + NM_000251 MSH2 0 . . . 0.57 69.85 66 9.98 Yes 46 -3.8 No 0 0 No -31 0.59 No 49 85.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59879794 - NM_032043 BRIP1 0 . . . 8.02 92.94 24 5.77 Yes 61 0.41 No 0 0 No -23 0.4 No 38 42.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108186258 + NM_000051 ATM 0 . . . 4.39 67.08 17 3.58 No 72 -3.07 No 0 0 No -25 0.42 No 42 49.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23649364 - NM_024675 PALB2 0 . . . 5.49 72.49 20 6.4 Yes 73 -3.46 No 0 0 No -25 0.49 No 46 55.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47703230 + NM_000251 MSH2 0 . . . 7.71 83.68 32 8.47 Yes 68 1.22 Yes 0 0 No -32 0.51 No 37 61.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68946173 + NM_133509 RAD51B 0 . . . 6.96 82.94 32 5.56 Yes 51 2.01 Yes 0 0 No -32 0.71 Yes 42 50.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190743491 + NM_000534 PMS1 0 . . . 3.07 74.5 19 4.82 No 20 0.78 Yes 0 0 No -18 0.72 Yes 48 45.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32936348 + NM_000059 BRCA2 0 . . . 7.48 86.34 28 5.38 No 11 1.32 Yes 0 0 No -27 0.49 No 47 91.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68839781 + NM_004360 CDH1 0 . . . 0.63 80.49 16 5.77 Yes 46 0.91 Yes 0 0 No -27 0.23 No 52 21.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68715708 + NM_133509 RAD51B 0 . . . 2.44 68.92 34 5.3 No 11 0.76 No 0 0 No -36 0.42 No 47 57.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75506824 - NM_001040108 MLH3 0 . . . 2.3 63.26 16 4.9 No 6 0.7 No 0 0 No -20 0.83 Yes 42 57.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215588450 - NM_000465 BARD1 0 . . . 4.79 82.21 40 5.81 Yes 30 0.8 Yes 0 0 No -31 0.82 Yes 49 82.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47737575 + NM_000251 MSH2 0 . . . 2.54 75.42 17 6.55 Yes 69 0.42 No 0 0 No -16 0.6 No 43 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47697590 + NM_000251 MSH2 0 . . . 1.08 84.22 33 6.18 Yes 33 1.2 Yes 0 0 No -32 0.5 No 25 62.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69076289 + NM_133509 RAD51B 0 . . . 3.14 71.61 44 6.62 Yes 39 1.54 Yes 0 0 No -18 0.51 No 46 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68525125 + NM_133509 RAD51B 0 . . . 6.25 80.15 27 6.34 Yes 38 -2.16 No 0 0 No -27 0.44 No 47 63.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94221686 - NM_005591 MRE11 0 . . . 4.05 64.76 29 5.9 Yes 15 0.82 Yes 0 0 No -28 0.62 No 43 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68728893 + NM_133509 RAD51B 0 . . . 6.66 75.72 14 3.67 No -3 0.18 No 0 0 No -33 0.46 No 44 70.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41273202 - NM_007294 BRCA1 0 . . . 2.41 72.33 17 4.07 No 30 1.19 Yes 0 0 No -45 0.58 No 28 66.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90994407 - NM_002485 NBN 0 . . . 6.34 73.85 18 4.8 No 23 0.89 Yes 0 0 No -40 0.48 No 48 64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108173461 + NM_000051 ATM 0 . . . 2.68 78.22 36 4.55 No 69 0.55 No 0 0 No -35 0.77 Yes 48 46.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1214613 + NM_000455 STK11 0 . . . 9.47 88.21 30 6 Yes 0 0.95 Yes 0 0 No -29 0.79 Yes 52 69.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68852943 + NM_004360 CDH1 0 . . . 2.24 80.12 49 7.87 Yes 7 1.02 Yes 0 0 No -31 0.77 Yes 51 82.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94216925 - NM_005591 MRE11 0 . . . 0.61 68.95 12 6.93 Yes 16 0.92 Yes 0 0 No -34 0.36 No 42 90.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68818265 + NM_133509 RAD51B 0 . . . 4.87 78.36 29 5.74 Yes 3 2.34 Yes 0 0 No -28 0.93 Yes 48 76.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56791464 + NM_058216 RAD51C 0 . . . 5.35 85.17 13 5.8 Yes 33 1.12 Yes 0 0 No -36 0.38 No 51 37.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68982539 + NM_133509 RAD51B 0 . . . 2.86 84 15 4.61 No 68 1.67 Yes 0 0 No -55 0.61 No 18 10.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68577978 + NM_133509 RAD51B 0 . . . 1.95 81.49 23 4.69 No 73 0.57 No 0 0 No -22 0.43 No 50 66.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108206360 + NM_000051 ATM 0 . . . 2.1 81.09 26 5.04 No 1 -1.39 No 0 0 No -23 0.29 No 53 49.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105207278 + NM_021930 RINT1 0 . . . 3.69 71.32 18 6.97 Yes 55 1.67 Yes 0 0 No -28 0.82 Yes 27 89.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59921912 - NM_032043 BRIP1 0 . . . 3.29 72.82 30 5.98 Yes 14 0.67 No 0 0 No -29 0.53 No 44 89.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59889726 - NM_032043 BRIP1 0 . . . 6.9 77.85 20 5.32 No 3 0.06 No 0 0 No -23 0.56 No 49 52.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37062778 + NM_000249 MLH1 0 . . . 3.41 71.94 47 8.18 Yes 26 0.46 No 0 0 No -34 0.66 No 44 94.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94190206 - NM_005591 MRE11 0 . . . 3.59 73.24 23 4.55 No 56 1.47 Yes 0 0 No -22 0.45 No 31 90.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37044415 + NM_000249 MLH1 0 . . . 2.95 70.24 26 5.48 No 61 -3.17 No 0 0 No -26 0.71 Yes 47 82.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68342370 + NM_133509 RAD51B 0 . . . 0.57 76.03 23 4.87 No 76 -5.72 No 0 0 No -22 0.59 No 51 59.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48007886 + NM_000179 MSH6 0 . . . 5.41 80.97 31 4.91 No 59 0.4 No 0 0 No -23 0.56 No 36 59.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190742177 + NM_000534 PMS1 0 . . . 1.65 65.47 26 5.19 No 27 1.12 Yes 0 0 No -25 0.87 Yes 51 92.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68836253 + NM_133509 RAD51B 0 . . . 6.26 80.9 29 5.57 Yes 61 0.79 Yes 0 0 No -29 0.61 No 45 52.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23641437 - NM_024675 PALB2 0 . . . 6.9 91.46 34 7.66 Yes 49 -1.76 No 0 0 No -33 0.75 Yes 44 94.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90959492 - NM_002485 NBN 0 . . . 10.13 83.45 22 5.1 No 11 1.12 Yes 0 0 No -21 0.51 No 47 85.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89647572 + NM_000314 PTEN 0 . . . 7.07 78.35 24 5.43 No 29 0.72 No 0 0 No -29 0.66 No 44 76.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37051836 + NM_000249 MLH1 0 . . . 2 80.34 30 4.47 No 32 1.13 Yes 0 0 No -29 0.6 No 42 60 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32930094 + NM_000059 BRCA2 0 . . . 3.92 80.05 17 5.38 No 10 0.33 No 0 0 No -23 0.41 No 42 61.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47801970 + NM_000251 MSH2 0 . . . 2.12 77.69 25 5.2 No 75 -5.46 No 0 0 No -24 0.79 Yes 47 85.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68444172 + NM_133509 RAD51B 0 . . . 2.35 68.5 35 6.16 Yes 33 0.55 No 0 0 No -34 0.88 Yes 49 53.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68846203 + NM_133509 RAD51B 0 . . . 6.39 69.3 29 7.35 Yes 20 0.53 No 0 0 No -28 0.9 Yes 38 92.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152347325 - NM_005431 XRCC2 0 . . . 1.75 0 16 5.66 Yes 1 0.12 No 0 0 No -38 0.27 No 49 52.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32887781 + NM_000059 BRCA2 0 . . . 0.13 85.91 29 4.78 No 37 1.56 Yes 0 0 No -24 0.43 No 31 41.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41000826 + NM_001164269 RAD51 0 . . . 3.33 81.25 17 3.85 No 2 1.42 Yes 0 0 No -57 0.49 No 18 70.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41230483 - NM_007294 BRCA1 0 . . . 4.6 81.7 24 5.66 Yes 64 1.28 Yes 0 0 No -23 0.94 Yes 29 59.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68908301 + NM_133509 RAD51B 0 . . . 2.63 74.2 19 5 No 31 -2.81 No 0 0 No -42 0.22 No 55 37.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41007962 + NM_001164269 RAD51 0 . . . 4.11 82.27 19 4.95 No 71 0.78 Yes 0 0 No -18 0.69 Yes 46 68.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21966393 - NM_000077 CDKN2A 0 . . . 0.79 71.66 23 4.22 No 63 0.2 No 0 0 No -22 0.32 No 53 33.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89680795 + NM_000314 PTEN 0 . . . 2.79 65.72 19 4.46 No 71 0.57 No 0 0 No -21 0.37 No 43 93.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68745235 + NM_133509 RAD51B 0 . . . 4.83 86.88 22 5.29 No 10 0.76 No 0 0 No -13 0.46 No 49 49.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68897249 + NM_133509 RAD51B 0 . . . 1.23 71.59 29 4.76 No 16 -1.68 No 0 0 No -28 0.69 Yes 23 41.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68774138 + NM_004360 CDH1 0 . . . 8.31 87.31 39 6.39 Yes 19 0.77 Yes 0 0 No -38 0.47 No 39 49.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68569306 + NM_133509 RAD51B 0 . . . 0.24 72.82 34 5.72 Yes 55 1.04 Yes 0 0 No -33 0.83 Yes 51 48.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29087583 - NM_001005735 CHEK2 0 . . . 0.2 80.65 36 5.89 Yes 33 1.02 Yes 0 0 No -33 0.43 No 50 70.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131951445 + NM_005732 RAD50 0 . . . 2.51 70.48 19 7.07 Yes 33 0.61 No 0 0 No -18 0.67 Yes 50 43.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68800008 + NM_004360 CDH1 0 . . . 2.99 69.26 28 6.44 Yes 14 0.68 No 0 0 No -27 0.64 No 36 61.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68813350 + NM_133509 RAD51B 0 . . . 2.69 0 21 3.67 No 27 0.47 No 0 0 No -25 0.34 No 48 85.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68571327 + NM_133509 RAD51B 0 . . . 7.38 93.28 22 4.69 No 52 1.35 Yes 0 0 No -24 0.48 No 45 82.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47793634 + NM_000251 MSH2 0 . . . 7.84 79.01 25 5.48 No 2 1.07 Yes 0 0 No -24 0.72 Yes 51 49.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69043398 + NM_133509 RAD51B 0 . . . 7.55 76.78 14 4.47 No 10 0.33 No 0 0 No -39 0.46 No 48 76.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68799031 + NM_004360 CDH1 0 . . . 7.42 0 18 5.29 No 52 -2.92 No 0 0 No -23 0.83 Yes 50 73.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131933059 + NM_005732 RAD50 0 . . . 0.9 66.86 21 4.69 No 70 0.98 Yes 0 0 No -45 0.49 No 31 80.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59771374 - NM_032043 BRIP1 0 . . . 0.87 65.45 26 5.46 No 54 0.84 Yes 0 0 No -25 0.95 Yes 55 32.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47691623 + NM_000251 MSH2 0 . . . 3.95 81.57 18 4.6 No 62 0.01 No 0 0 No -27 0.41 No 51 81.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108217076 + NM_000051 ATM 0 . . . 0.19 0 21 5.89 Yes 21 0.9 Yes 0 0 No -20 0.76 Yes 47 60.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68797186 + NM_133509 RAD51B 0 . . . 2.59 59.41 16 5.09 No 0 0.02 No 0 0 No -20 0.43 No 58 40.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68977539 + NM_133509 RAD51B 0 . . . 1.64 0 16 4.47 No 64 0.77 No 0 0 No -15 0.51 No 37 79.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41002072 + NM_001164269 RAD51 0 . . . 4.18 71.24 18 4.89 No 7 1.73 Yes 0 0 No -23 0.36 No 47 73.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37053110 + NM_000249 MLH1 0 . . . 0.76 0 15 4.42 No 57 0.66 No 0 0 No -25 0.8 Yes 54 70.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59894971 - NM_032043 BRIP1 0 . . . 1.48 59.85 23 5.29 No 8 0.19 No 0 0 No -23 0.45 No 50 83.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68511065 + NM_133509 RAD51B 0 . . . 5.18 74.4 20 7.06 Yes 17 0.41 No 0 0 No -19 0.91 Yes 41 64.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59771182 - NM_032043 BRIP1 0 . . . 3.48 75.15 29 7.68 Yes 61 0.31 No 0 0 No -28 0.91 Yes 48 47.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69078868 + NM_133509 RAD51B 0 . . . 4.85 83.23 27 5.65 Yes 3 0.2 No 0 0 No -27 0.49 No 46 77.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68566044 + NM_133509 RAD51B 0 . . . 7.53 69.02 51 6.25 Yes 10 0.84 Yes 0 0 No -38 0.63 No 48 74.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29082620 - NM_001005735 CHEK2 0 . . . 5.43 72.84 18 5.39 No 67 0.01 No 0 0 No -17 0.51 No 50 79.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68809374 + NM_133509 RAD51B 0 . . . 0.54 74.13 27 5.61 Yes -3 0.11 No 0 0 No -26 0.73 Yes 61 32.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68611155 + NM_133509 RAD51B 0 . . . 1.57 72.79 31 5.77 Yes 66 -6.76 No 0 0 No -30 0.75 Yes 23 42.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59829646 - NM_032043 BRIP1 0 . . . 0.05 65.43 23 4.79 No 34 1.25 Yes 0 0 No -22 0.74 Yes 34 94.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47673507 + NM_000251 MSH2 0 . . . 9.29 85.23 32 5.91 Yes 64 0.9 Yes 0 0 No -31 0.48 No 47 48.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41202827 - NM_007294 BRCA1 0 . . . 6.31 84.1 12 4.24 No 38 -3.04 No 0 0 No -36 0.96 Yes 52 70.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68986528 + NM_133509 RAD51B 0 . . . 3 0 32 6.76 Yes 38 -1.6 No 0 0 No -31 0.87 Yes 32 36.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68737660 + NM_133509 RAD51B 0 . . . 7.66 93.22 20 4.9 No 49 1.07 Yes 0 0 No -19 0.25 No 52 63.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215653888 - NM_000465 BARD1 0 . . . 5.92 74.36 15 6.15 Yes 25 0.37 No 0 0 No -25 0.74 Yes 43 49.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68490621 + NM_133509 RAD51B 0 . . . 2.74 67.26 18 5.91 Yes 47 -1.63 No 0 0 No -31 0.44 No 29 87.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69066586 + NM_133509 RAD51B 0 . . . 10.6 91.38 29 7.68 Yes 38 0.61 No 0 0 No -28 0.96 Yes 48 94.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68810187 + NM_133509 RAD51B 0 . . . 0.53 0 31 7.07 Yes 24 0.9 Yes 0 0 No -30 0.91 Yes 24 66.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68749595 + NM_133509 RAD51B 0 . . . 1.06 77.83 20 6.4 Yes 2 1.13 Yes 0 0 No -19 0.48 No 41 60.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68940346 + NM_133509 RAD51B 0 . . . 2.86 78.61 36 4.99 No 18 -3.45 No 0 0 No -30 0.54 No 43 51.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94223802 - NM_005591 MRE11 0 . . . 1.17 71.16 16 4.69 No 40 0.85 Yes 0 0 No -23 0.69 Yes 45 54.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89699103 + NM_000314 PTEN 0 . . . 0.99 84.41 15 5.82 Yes 61 1.95 Yes 0 0 No -27 0.74 Yes 46 35.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108131969 + NM_000051 ATM 0 . . . 6.7 81.99 24 5.19 No 21 0.81 Yes 0 0 No -23 0.81 Yes 51 75.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68951257 + NM_133509 RAD51B 0 . . . 5.2 85.02 33 6.14 Yes 5 1.23 Yes 0 0 No -32 0.88 Yes 53 77.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23647975 - NM_024675 PALB2 0 . . . 5.79 70.87 28 5.74 Yes 64 0.02 No 0 0 No -27 0.82 Yes 48 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68869046 + NM_004360 CDH1 0 . . . 7.24 88.79 27 5.2 No 58 0.68 No 0 0 No -53 0.74 Yes 47 84.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69129380 + NM_133509 RAD51B 0 . . . 5.85 71.8 21 5.05 No 75 1.54 Yes 0 0 No -31 0.37 No 42 34.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68426508 + NM_133509 RAD51B 0 . . . 3.03 69.81 20 5.1 No 55 0.76 No 0 0 No -19 0.63 No 47 57.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68677977 + NM_133509 RAD51B 0 . . . 1.75 68.16 21 5.1 No 40 1.78 Yes 0 0 No -21 0.37 No 49 32.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90985466 - NM_002485 NBN 0 . . . 4.26 81.04 19 5 No 16 0.28 No 0 0 No -23 0.54 No 37 68.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59808140 - NM_032043 BRIP1 0 . . . 1.81 62.14 11 4.65 No 70 0.45 No 0 0 No -16 0.53 No 51 50.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105209457 + NM_021930 RINT1 0 . . . 5.2 82.22 35 6.49 Yes 49 -2.29 No 0 0 No -21 0.7 Yes 50 57.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68659368 + NM_133509 RAD51B 0 . . . 4.3 71.49 31 6.63 Yes -4 0.96 Yes 0 0 No -30 0.85 Yes 45 79.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47674234 + NM_000251 MSH2 0 . . . 6.08 74.91 19 4.46 No 19 0.47 No 0 0 No -18 0.68 Yes 39 86.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108207963 + NM_000051 ATM 0 . . . 1.53 78.62 16 4.54 No 59 0.41 No 0 0 No -20 0.52 No 25 74.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68840630 + NM_133509 RAD51B 0 . . . 0.99 72.07 25 4.88 No 15 0.19 No 0 0 No -24 0.75 Yes 43 61.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47693731 + NM_000251 MSH2 0 . . . 5.83 69.21 15 4.58 No 21 0.88 Yes 0 0 No -30 0.2 No 37 85.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68867580 + NM_133509 RAD51B 0 . . . 3.93 77.22 12 3.76 No 44 0.65 No 0 0 No -23 0.78 Yes 42 76.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68625356 + NM_133509 RAD51B 0 . . . 3.96 84.34 24 6.96 Yes 55 0.82 Yes 0 0 No -23 0.67 Yes 44 66.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75505274 - NM_001040108 MLH3 0 . . . 8.38 77.43 29 6.98 Yes 24 1.39 Yes 0 0 No -28 0.93 Yes 34 62.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47644406 + NM_000251 MSH2 0 . . . 5.1 69.52 23 6.45 Yes 52 0.2 No 0 0 No -22 0.8 Yes 47 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56797041 + NM_058216 RAD51C 0 . . . 0.13 77.47 35 6.78 Yes 74 -2.8 No 0 0 No -26 0.36 No 40 53.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215619158 - NM_000465 BARD1 0 . . . 4.12 67.95 70 8.89 Yes 75 0.18 No 0 0 No -32 0.53 No 46 53.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68330883 + NM_133509 RAD51B 0 . . . 6.5 85.95 10 5.37 No 3 1.15 Yes 0 0 No -41 0.29 No 44 51.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41244364 - NM_007294 BRCA1 0 . . . 1.57 67.55 20 5.57 Yes 64 -6.09 No 0 0 No -19 0.42 No 61 52.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68615542 + NM_133509 RAD51B 0 . . . 7.72 80.76 18 7.16 Yes 32 -3.09 No 0 0 No -27 0.71 Yes 45 76.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68678797 + NM_133509 RAD51B 0 . . . 2.53 76.43 16 4.58 No 75 -2.91 No 0 0 No -22 0.62 No 45 80.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59841362 - NM_032043 BRIP1 0 . . . 0.33 59.7 26 5.66 Yes 14 0.29 No 0 0 No -25 0.79 Yes 44 73.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68581517 + NM_133509 RAD51B 0 . . . 0.05 66.28 20 5.73 Yes -4 0.22 No 0 0 No -19 0.52 No 51 69.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90983969 - NM_002485 NBN 0 . . . 4.78 69.58 24 5.13 No 1 0.15 No 0 0 No -23 0.87 Yes 40 40.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68622650 + NM_133509 RAD51B 0 . . . 5.24 79.34 24 5.69 Yes 19 0.45 No 0 0 No -23 0.46 No 39 60.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131891964 + NM_005732 RAD50 0 . . . 2.16 0 28 4.94 No 51 0.78 Yes 0 0 No -27 0.68 Yes 52 38.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32919494 + NM_000059 BRCA2 0 . . . 0.56 63.37 24 4.49 No 65 0.04 No 0 0 No -55 0.65 No 51 71.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89688651 + NM_000314 PTEN 0 . . . 6.1 76.41 19 5.65 Yes 38 1.26 Yes 0 0 No -18 0.71 Yes 17 37.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190669251 + NM_000534 PMS1 0 . . . 5.21 84.74 28 5.37 No 44 -2.64 No 0 0 No -42 0.54 No 53 73.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108211240 + NM_000051 ATM 0 . . . 3.19 81.51 45 7.75 Yes 30 0.69 No 0 0 No -20 0.49 No 49 58.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68290344 + NM_133509 RAD51B 0 . . . 5.22 90.71 16 4.85 No 23 0.39 No 0 0 No -20 0.86 Yes 48 73.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56807644 + NM_058216 RAD51C 0 . . . 1.27 84.22 28 5.83 Yes 33 1.18 Yes 0 0 No -27 0.67 Yes 50 45.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56772783 + NM_058216 RAD51C 0 . . . 5.3 74.06 28 4.24 No 25 1.01 Yes 0 0 No -22 0.72 Yes 38 62.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89687660 + NM_000314 PTEN 0 . . . 3.74 69.1 25 5.2 No 76 0.6 No 0 0 No -25 0.71 Yes 30 88.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215588509 - NM_000465 BARD1 0 . . . 3.05 0 20 4.9 No 55 1.19 Yes 0 0 No -19 0.87 Yes 46 55.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68405901 + NM_133509 RAD51B 0 . . . 4.5 72.39 12 5.2 No -3 0.38 No 0 0 No -26 0.48 No 42 74.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68892380 + NM_133509 RAD51B 0 . . . 3.62 86.52 11 4.12 No 38 0.14 No 0 0 No -30 0.95 Yes 45 49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52433823 - NM_004656 BAP1 0 . . . 7.18 69.6 21 3.98 No 51 -2.52 No 0 0 No -30 0.37 No 48 39.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68554984 + NM_133509 RAD51B 0 . . . 2.74 66.46 20 4.9 No 21 1.03 Yes 0 0 No -19 0.82 Yes 37 69.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68919536 + NM_133509 RAD51B 0 . . . 8.79 80.33 22 4.8 No 53 1.54 Yes 0 0 No -21 0.92 Yes 48 61.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68826485 + NM_133509 RAD51B 0 . . . 7.97 74.37 29 4.91 No 35 0.84 Yes 0 0 No -24 0.73 Yes 38 49.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52433253 - NM_004656 BAP1 0 . . . 4.25 61.85 20 7.14 Yes 18 0.54 No 0 0 No -19 0.71 Yes 40 90.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131952273 + NM_005732 RAD50 0 . . . 1.39 80.75 17 4.58 No 61 0.46 No 0 0 No -16 0.64 No 15 79.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68801034 + NM_133509 RAD51B 0 . . . 6.41 88.15 26 5.32 No 16 -1.68 No 0 0 No -25 0.61 No 44 48.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68504100 + NM_133509 RAD51B 0 . . . 0.94 68.26 23 5.87 Yes 34 -2.11 No 0 0 No -29 0.41 No 48 73.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152352558 - NM_005431 XRCC2 0 . . . 0.9 80.37 25 5.1 No 76 1.21 Yes 0 0 No -19 0.51 No 50 88.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68849570 + NM_004360 CDH1 0 . . . 2.8 68.03 12 5.01 No 63 1.53 Yes 0 0 No -20 0.59 No 37 55.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68638787 + NM_133509 RAD51B 0 . . . 4.03 74.78 17 3.71 No 43 0.99 Yes 0 0 No -20 0.87 Yes 44 67.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68702577 + NM_133509 RAD51B 0 . . . 3.68 73.04 18 4.72 No 55 -5.1 No 0 0 No -27 0.85 Yes 42 35.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41210676 - NM_007294 BRCA1 0 . . . 3.86 80.03 27 5.57 Yes 65 0.39 No 0 0 No -27 0.59 No 53 62.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68940446 + NM_133509 RAD51B 0 . . . 10.23 100 15 3.39 No 30 0.97 Yes 0 0 No -26 0.36 No 49 74.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41230148 - NM_007294 BRCA1 0 . . . 4.54 78.83 28 5.14 No 57 -3.82 No 0 0 No -26 0.42 No 53 60.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68914951 + NM_133509 RAD51B 0 . . . 6.1 87.46 21 4.9 No 73 -4.1 No 0 0 No -20 0.89 Yes 44 71.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215636529 - NM_000465 BARD1 0 . . . 6 84.82 29 5.56 Yes 57 0.03 No 0 0 No -28 0.72 Yes 50 90.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59789152 - NM_032043 BRIP1 0 . . . 5.72 88.68 12 5.48 No 9 0.46 No 0 0 No -23 0.48 No 49 90.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59889825 - NM_032043 BRIP1 0 . . . 3.41 0 9 6 Yes 59 0.92 Yes 0 0 No -29 0.7 Yes 33 91.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69008790 + NM_133509 RAD51B 0 . . . 1.35 87.56 41 6.13 Yes 0 0.51 No 0 0 No -33 0.5 No 51 56.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68597496 + NM_133509 RAD51B 0 . . . 1.06 72.39 27 5.39 No 63 -2.62 No 0 0 No -57 0.67 Yes 34 57.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23617361 - NM_024675 PALB2 0 . . . 5.83 76.78 25 4.89 No 74 0.24 No 0 0 No -21 0.61 No 43 72.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56807872 + NM_058216 RAD51C 0 . . . 2.77 67.05 11 4.58 No 21 0.44 No 0 0 No -39 0.77 Yes 37 86.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68327950 + NM_133509 RAD51B 0 . . . 1.77 71.75 14 4.34 No 0 0.88 Yes 0 0 No -32 0.62 No 47 40.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68786931 + NM_133509 RAD51B 0 . . . 1.57 67.81 56 7.55 Yes 59 0.55 No 0 0 No -35 0.52 No 36 81.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68856274 + NM_004360 CDH1 0 . . . 2.57 83.68 9 3.87 No 20 1.48 Yes 0 0 No -24 0.3 No 38 69.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68908094 + NM_133509 RAD51B 0 . . . 2.32 67.6 18 4.09 No 11 1.2 Yes 0 0 No -24 0.88 Yes 47 94.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68315624 + NM_133509 RAD51B 0 . . . 4.86 62.68 14 4.92 No 55 -1.4 No 0 0 No -20 0.85 Yes 36 67.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32913401 + NM_000059 BRCA2 0 . . . 0.51 77.05 16 4.54 No 75 -4.12 No 0 0 No -20 0.73 Yes 47 58.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7580296 - NM_000546 TP53 0 . . . 3.51 0 23 4.88 No 63 -4.16 No 0 0 No -22 0.64 No 43 79.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68527246 + NM_133509 RAD51B 0 . . . 5.88 84.95 21 5.08 No -1 0.11 No 0 0 No -24 0.68 Yes 48 83.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68971950 + NM_133509 RAD51B 0 . . . 1.41 67.3 18 5.65 Yes 59 -1.89 No 0 0 No -17 0.47 No 45 55.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68962567 + NM_133509 RAD51B 0 . . . 5.89 81.46 53 8.4 Yes 59 1.13 Yes 0 0 No -34 0.45 No 47 84.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68664719 + NM_133509 RAD51B 0 . . . 3.32 0 21 4.79 No 41 0.71 No 0 0 No -21 0.73 Yes 44 74.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89722890 + NM_000314 PTEN 0 . . . 2.39 75.76 76 8.46 Yes 36 1.5 Yes 0 0 No -22 0.48 No 26 54.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68731266 + NM_133509 RAD51B 0 . . . 0.91 66.49 12 5.77 Yes 10 0.38 No 0 0 No -23 0.71 Yes 48 77.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68478635 + NM_133509 RAD51B 0 . . . 3.89 77.43 33 6.03 Yes 38 1.4 Yes 0 0 No -32 0.63 No 50 62.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68318776 + NM_133509 RAD51B 0 . . . 7.57 80.27 14 4.4 No 1 0.93 Yes 0 0 No -18 0.64 No 42 91.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37076530 + NM_000249 MLH1 0 . . . 1.12 0 13 5.66 Yes 53 -1.76 No 0 0 No -25 0.73 Yes 51 55.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131952867 + NM_005732 RAD50 0 . . . 1.35 65.87 32 5.74 Yes 40 1.46 Yes 0 0 No -28 0.5 No 39 68.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56776052 + NM_058216 RAD51C 0 . . . 0.94 74.2 14 4.95 No 48 0.28 No 0 0 No -22 0.49 No 46 73.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215623543 - NM_000465 BARD1 0 . . . 2.9 74 19 5.01 No 52 0.48 No 0 0 No -23 0.87 Yes 15 40.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41218259 - NM_007294 BRCA1 0 . . . 11.16 86.97 16 6.53 Yes 73 -2.21 No 0 0 No -23 0.63 No 43 75.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69133385 + NM_133509 RAD51B 0 . . . 0.42 67.97 48 6.57 Yes 30 0.42 No 0 0 No -38 0.87 Yes 43 68.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89656990 + NM_000314 PTEN 0 . . . 2.99 85.02 32 7.23 Yes 4 0.96 Yes 0 0 No -31 0.31 No 49 53.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32906942 + NM_000059 BRCA2 0 . . . 3.78 93.59 39 6.06 Yes 62 -3.18 No 0 0 No -21 0.6 No 51 26.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68473449 + NM_133509 RAD51B 0 . . . 0.16 65.34 15 4.58 No 35 0.52 No 0 0 No -53 0.32 No 47 63.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105204342 + NM_021930 RINT1 0 . . . 1.29 60.14 31 7.28 Yes 1 0.67 No 0 0 No -30 0.8 Yes 46 44.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68973982 + NM_133509 RAD51B 0 . . . 2.08 73.74 15 5.39 No 42 1.73 Yes 0 0 No -28 0.31 No 47 33.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59814324 - NM_032043 BRIP1 0 . . . 4.87 66.75 37 4.95 No 58 1.21 Yes 0 0 No -30 0.56 No 44 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6046627 - NM_000535 PMS2 0 . . . 2.26 73.97 25 4.82 No 7 0.89 Yes 0 0 No -25 0.62 No 47 72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68965612 + NM_133509 RAD51B 0 . . . 0.56 86.07 18 4.9 No 55 0.74 No 0 0 No -17 0.32 No 50 38.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21985577 - NM_000077 CDKN2A 0 . . . 1.59 71.84 25 5.38 No 51 -2.85 No 0 0 No -22 0.81 Yes 47 59.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89679068 + NM_000314 PTEN 0 . . . 0.17 75.88 33 5.28 No -2 0.47 No 0 0 No -27 0.47 No 44 76.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41266216 - NM_007294 BRCA1 0 . . . 3.8 69.73 25 3.7 No 54 0.58 No 0 0 No -24 0.45 No 49 83.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105192192 + NM_021930 RINT1 0 . . . 3.44 78.18 23 5.12 No 48 1.07 Yes 0 0 No -22 0.48 No 48 51.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68445656 + NM_133509 RAD51B 0 . . . 0.92 67.1 13 4.68 No 55 -3.78 No 0 0 No -23 0.59 No 28 57.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47755115 + NM_000251 MSH2 0 . . . 4.4 79.13 14 4.99 No 5 1.35 Yes 0 0 No -21 0.65 No 44 57.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89632659 + NM_000314 PTEN 0 . . . 6.83 81.27 36 5.61 Yes -3 0.99 Yes 0 0 No -25 0.65 No 36 57.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108135568 + NM_000051 ATM 0 . . . 2.15 68.08 12 5.39 No 71 -3.76 No 0 0 No -22 0.34 No 43 50.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48022527 + NM_000179 MSH6 0 . . . 0.79 65.58 34 5.58 Yes 67 0.83 Yes 0 0 No -29 0.76 Yes 25 66.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68766304 + NM_133509 RAD51B 0 . . . 6.07 85.6 31 5.71 Yes 29 -3.91 No 0 0 No -30 0.78 Yes 46 72.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29107085 - NM_001005735 CHEK2 0 . . . 6.33 74.63 19 4.8 No 4 1.23 Yes 0 0 No -18 0.55 No 44 51.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41203695 - NM_007294 BRCA1 0 . . . 1.51 0 20 5.05 No 72 -5.27 No 0 0 No -19 0.41 No 50 28.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68559365 + NM_133509 RAD51B 0 . . . 6.31 81.13 17 8.03 Yes 68 0.91 Yes 0 0 No -16 0.26 No 49 52.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190656603 + NM_000534 PMS1 0 . . . 3.22 70.63 21 5.24 No 10 0.41 No 0 0 No -29 0.64 No 48 69.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47787386 + NM_000251 MSH2 0 . . . 1.77 71.98 22 4.01 No 31 -0.77 No 0 0 No -21 0.43 No 49 53.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90984759 - NM_002485 NBN 0 . . . 4.61 86.8 63 5.1 No 30 1.23 Yes 0 0 No -22 0.48 No 44 82.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75498170 - NM_001040108 MLH3 0 . . . 5.88 85.6 28 5.29 No 2 1.07 Yes 0 0 No -27 0.79 Yes 46 73.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68349095 + NM_133509 RAD51B 0 . . . 8.83 85.69 31 6.56 Yes 42 1.38 Yes 0 0 No -30 0.79 Yes 53 75.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23635572 - NM_024675 PALB2 0 . . . 0.24 0 15 5.2 No 72 0.13 No 0 0 No -20 0.63 No 30 55.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131921414 + NM_005732 RAD50 0 . . . 2.53 82.56 25 6.41 Yes 33 1.08 Yes 0 0 No -30 0.9 Yes 50 89.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41231731 - NM_007294 BRCA1 0 . . . 2.19 70 23 3.85 No 16 0.8 Yes 0 0 No -22 0.74 Yes 42 95.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59866961 - NM_032043 BRIP1 0 . . . 0.8 0 41 5.77 Yes 64 0 No 0 0 No -29 0.56 No 48 19.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56807186 + NM_058216 RAD51C 0 . . . 0.78 78.12 56 7.1 Yes 76 1.77 Yes 0 0 No -21 0.66 Yes 45 59.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37037385 + NM_000249 MLH1 0 . . . 0.16 68.34 10 4.69 No 73 1.36 Yes 0 0 No -47 0.52 No 17 21.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59866819 - NM_032043 BRIP1 0 . . . 1.73 69.65 53 5.74 Yes 46 0 No 0 0 No -31 0.57 No 36 47.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68849971 + NM_133509 RAD51B 0 . . . 0.38 0 21 4.36 No 13 1.74 Yes 0 0 No -20 0.9 Yes 45 86.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94161729 - NM_005591 MRE11 0 . . . 4.48 88.31 28 5.63 Yes 76 1.67 Yes 0 0 No -27 0.79 Yes 53 63.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68790108 + NM_004360 CDH1 0 . . . 6.15 79.39 28 6.08 Yes -4 0.78 Yes 0 0 No -27 0.85 Yes 49 96.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68468014 + NM_133509 RAD51B 0 . . . 5.95 77.84 42 6.71 Yes 10 0.91 Yes 0 0 No -41 0.52 No 48 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68414686 + NM_133509 RAD51B 0 . . . 5.09 77.82 42 6.63 Yes 25 0.52 No 0 0 No -37 0.66 No 14 49.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190689513 + NM_000534 PMS1 0 . . . 2.84 83.37 20 7.14 Yes 8 0.38 No 0 0 No -19 0.58 No 44 95.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68430466 + NM_133509 RAD51B 0 . . . 4.67 73.37 18 4.73 No 14 1.08 Yes 0 0 No -25 0.42 No 44 63.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68292097 + NM_133509 RAD51B 0 . . . 0.62 72.27 16 4.69 No 29 0.19 No 0 0 No -51 0.45 No 43 55.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48016788 + NM_000179 MSH6 0 . . . 1.58 77.06 19 4.8 No 51 0.93 Yes 0 0 No -62 0.33 No 34 69.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37052749 + NM_000249 MLH1 0 . . . 0.09 74.68 22 5.23 No 4 0.41 No 0 0 No -21 0.77 Yes 54 83.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108214154 + NM_000051 ATM 0 . . . 2.5 67.69 49 6.07 Yes 12 0.07 No 0 0 No -23 0.63 No 45 70.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108099502 + NM_000051 ATM 0 . . . 2.23 66.69 23 7.33 Yes 32 -2.73 No 0 0 No -22 0.9 Yes 51 41.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23629807 - NM_024675 PALB2 0 . . . 9.01 89.28 17 6.25 Yes 63 0.61 No 0 0 No -33 0.67 Yes 44 79.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68803188 + NM_004360 CDH1 0 . . . 3.58 68.14 19 5.45 No 58 0.76 No 0 0 No -18 0.48 No 42 35.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41250876 - NM_007294 BRCA1 0 . . . 2.01 0 14 5.52 No 72 -5.28 No 0 0 No -46 0.34 No 50 41.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41197392 - NM_007294 BRCA1 0 . . . 3.08 82.93 24 5.77 Yes 4 1.54 Yes 0 0 No -23 0.89 Yes 54 50.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69128731 + NM_133509 RAD51B 0 . . . 3.2 71.59 22 5.1 No 0 1.17 Yes 0 0 No -19 0.55 No 19 71.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32963259 + NM_000059 BRCA2 0 . . . 5.25 80.81 28 5.26 No 73 0.38 No 0 0 No -21 0.38 No 48 80.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89656032 + NM_000314 PTEN 0 . . . 3.01 65.44 19 5.05 No 55 -4.87 No 0 0 No -22 0.58 No 51 59.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680922 + NM_000251 MSH2 0 . . . 0.56 73.73 28 6.59 Yes 34 0.84 Yes 0 0 No -27 0.4 No 55 31.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68858084 + NM_004360 CDH1 0 . . . 2.58 78.97 22 3.89 No 6 0.98 Yes 0 0 No -21 0.54 No 52 78.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68836909 + NM_004360 CDH1 0 . . . 7.54 84.71 22 5.46 No 74 -4.25 No 0 0 No -46 0.77 Yes 43 74.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47640057 + NM_000251 MSH2 0 . . . 2.32 83.37 41 6.54 Yes 36 1.18 Yes 0 0 No -26 0.8 Yes 22 83.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37082756 + NM_000249 MLH1 0 . . . 1.15 69.96 12 4.66 No 71 0.76 No 0 0 No -15 0.38 No 29 56.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68312809 + NM_133509 RAD51B 0 . . . 0.56 63.45 18 4.95 No 30 -1.17 No 0 0 No -17 0.55 No 41 74.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190670027 + NM_000534 PMS1 0 . . . 0.62 62.15 19 4.74 No 37 0.6 No 0 0 No -19 0.47 No 48 57.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75515222 - NM_001040108 MLH3 0 . . . 3.47 82.61 13 5.39 No 2 0.66 No 0 0 No -22 0.65 No 51 53.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48032816 + NM_000179 MSH6 0 . . . 2.02 68.6 44 7.37 Yes 65 0.68 No 0 0 No -43 0.84 Yes 57 67.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90955576 - NM_002485 NBN 0 . . . 1.23 76.23 19 5 No 76 0.64 No 0 0 No -41 0.45 No 25 85.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6017134 - NM_000535 PMS2 0 . . . 1.64 73.78 85 8.53 Yes 12 0.98 Yes 0 0 No -23 0.53 No 46 75.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68771532 + NM_004360 CDH1 0 . . . 3.33 74.22 19 5 No 68 1.07 Yes 0 0 No -38 0.6 No 43 42.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59766131 - NM_032043 BRIP1 0 . . . 0.86 66.86 32 5.91 Yes 26 1.08 Yes 0 0 No -51 0.71 Yes 32 96.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69150582 + NM_133509 RAD51B 0 . . . 4.21 84.47 20 4.69 No 27 1.04 Yes 0 0 No -19 0.91 Yes 31 60.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47696115 + NM_000251 MSH2 0 . . . 1.93 84.41 22 5.29 No 42 1.11 Yes 0 0 No -21 0.8 Yes 41 82.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29135674 - NM_001005735 CHEK2 0 . . . 0.78 82.92 22 4.93 No 22 0.61 No 0 0 No -22 0.88 Yes 36 97.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108204384 + NM_000051 ATM 0 . . . 1.39 59.49 26 3.92 No 36 0.19 No 0 0 No -25 0.72 Yes 52 81.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32916082 + NM_000059 BRCA2 0 . . . 0.05 69.17 25 5.57 Yes 28 -2.41 No 0 0 No -24 0.83 Yes 47 77.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68321916 + NM_133509 RAD51B 0 . . . 0.41 68.55 9 4.73 No 59 1.68 Yes 0 0 No -53 0.83 Yes 44 59.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90943579 - NM_002485 NBN 0 . . . 1.79 75.58 13 4.36 No 49 0.81 Yes 0 0 No -42 0.32 No 38 74.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131900486 + NM_005732 RAD50 0 . . . 6.15 84.05 33 7.18 Yes 32 0.2 No 0 0 No -32 0.84 Yes 44 49.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6031142 - NM_000535 PMS2 0 . . . 2.62 78.14 14 5.1 No 30 0.58 No 0 0 No -40 0.73 Yes 44 59.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108101375 + NM_000051 ATM 0 . . . 5.98 76.99 36 6.83 Yes 66 1.16 Yes 0 0 No -35 0.8 Yes 48 61.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190661781 + NM_000534 PMS1 0 . . . 2.87 72.33 22 5.28 No 76 -6.09 No 0 0 No -21 0.69 Yes 44 64.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68527122 + NM_133509 RAD51B 0 . . . 9.27 85.48 18 5.09 No 9 0.63 No 0 0 No -33 0.69 Yes 44 84.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68783848 + NM_133509 RAD51B 0 . . . 4.55 83.92 20 5.57 Yes 51 -3.05 No 0 0 No -19 0.68 Yes 49 62.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68497292 + NM_133509 RAD51B 0 . . . 4.27 73.71 26 5.11 No 42 1.72 Yes 0 0 No -24 0.56 No 50 36.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94181268 - NM_005591 MRE11 0 . . . 10.48 88.2 14 5.97 Yes 28 0.78 Yes 0 0 No -19 0.63 No 45 87.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68421583 + NM_133509 RAD51B 0 . . . 3.75 72.59 27 6.65 Yes 3 0.09 No 0 0 No -26 0.83 Yes 55 39.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68521546 + NM_133509 RAD51B 0 . . . 2.01 76.14 19 4.68 No 0 -0.33 No 0 0 No -23 0.7 Yes 41 49.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68598843 + NM_133509 RAD51B 0 . . . 0.5 0 20 4.88 No 39 0.57 No 0 0 No -19 0.3 No 51 67.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32938565 + NM_000059 BRCA2 0 . . . 4.36 0 29 5.35 No 35 0.93 Yes 0 0 No -28 0.69 Yes 33 71.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190663038 + NM_000534 PMS1 0 . . . 2.79 74.27 27 5.57 Yes 49 1.36 Yes 0 0 No -26 0.91 Yes 30 67.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68289475 + NM_133509 RAD51B 0 . . . 1.78 64.82 20 4.9 No 44 0.88 Yes 0 0 No -19 0.52 No 33 58.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68938378 + NM_133509 RAD51B 0 . . . 3.46 76.51 26 5.48 No 38 0.56 No 0 0 No -30 0.53 No 46 63.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69050502 + NM_133509 RAD51B 0 . . . 4.55 67.45 13 4.63 No 22 0.93 Yes 0 0 No -20 0.3 No 36 67.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48025513 + NM_000179 MSH6 0 . . . 3.39 78.36 27 5.74 Yes -1 1.2 Yes 0 0 No -26 0.61 No 59 40.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21975230 - NM_000077 CDKN2A 0 . . . 4.27 87.25 21 5.01 No 8 0.7 No 0 0 No -45 0.63 No 50 58.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47755076 + NM_000251 MSH2 0 . . . 4.35 0 14 5.72 Yes -3 0.13 No 0 0 No -22 0.51 No 48 66.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47742759 + NM_000251 MSH2 0 . . . 5.29 81.43 20 5.1 No 63 -3.64 No 0 0 No -19 0.24 No 52 61.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851533 - NM_032043 BRIP1 0 . . . 3.04 62.9 15 4.51 No 28 0.35 No 0 0 No -26 0.59 No 42 68.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68557810 + NM_133509 RAD51B 0 . . . 4.03 90.18 38 6.67 Yes 49 0.79 Yes 0 0 No -37 0.33 No 37 65.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59914409 - NM_032043 BRIP1 0 . . . 2.55 68.12 33 5.56 Yes 57 0.96 Yes 0 0 No -32 0.53 No 43 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32939491 + NM_000059 BRCA2 0 . . . 1.26 66.03 27 4.91 No 20 0.13 No 0 0 No -26 0.73 Yes 46 83.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68989081 + NM_133509 RAD51B 0 . . . 7.2 82.54 36 6.69 Yes 39 0.15 No 0 0 No -35 0.52 No 47 47.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68696763 + NM_133509 RAD51B 0 . . . 0.27 0 27 5.61 Yes 15 1.19 Yes 0 0 No -26 0.59 No 39 62.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68450866 + NM_133509 RAD51B 0 . . . 1.96 78.07 27 5.74 Yes 33 0.98 Yes 0 0 No -26 0.9 Yes 25 32.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94184841 - NM_005591 MRE11 0 . . . 5.11 72.66 20 2.89 No 41 1.04 Yes 0 0 No -22 0.45 No 34 88.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68327244 + NM_133509 RAD51B 0 . . . 3.95 77.74 35 6.4 Yes 31 -2.33 No 0 0 No -34 0.61 No 43 93.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89712002 + NM_000314 PTEN 0 . . . 1.43 75.37 18 4.9 No 63 -2.48 No 0 0 No -35 0.56 No 36 75.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94184572 - NM_005591 MRE11 0 . . . 5.42 77.89 25 4.77 No 4 0.37 No 0 0 No -24 0.65 No 45 75.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215626144 - NM_000465 BARD1 0 . . . 0.63 0 26 5.57 Yes 71 1.02 Yes 0 0 No -25 0.64 No 35 47.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90971185 - NM_002485 NBN 0 . . . 1.34 0 17 4.6 No 50 0.14 No 0 0 No -38 0.94 Yes 39 37.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89690760 + NM_000314 PTEN 0 . . . 6.61 79.58 18 4.91 No 66 -3.26 No 26 0.58 Yes -22 0.68 Yes 42 52.95 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 68995641 + NM_133509 RAD51B 0 . . . 1.11 0 30 5.55 No 8 0.81 Yes 0 0 No -29 0.83 Yes 50 63.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89625169 + NM_000314 PTEN 0 . . . 0.95 69.17 41 6.4 Yes 74 0.43 No 0 0 No -40 0.42 No 53 57.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68734012 + NM_133509 RAD51B 0 . . . 4.16 69.76 22 5.29 No -2 0.15 No 0 0 No -21 0.55 No 43 28.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68375652 + NM_133509 RAD51B 0 . . . 2.49 68.8 34 7.28 Yes 22 0.16 No 0 0 No -33 0.95 Yes 47 58.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190735350 + NM_000534 PMS1 0 . . . 5.2 73.38 27 4.77 No 33 0.85 Yes 0 0 No -26 0.8 Yes 45 54.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32890886 + NM_000059 BRCA2 0 . . . 2.04 77.96 28 5.39 No -4 0.27 No 0 0 No -27 0.8 Yes 62 18.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68668804 + NM_133509 RAD51B 0 . . . 4.98 71.15 23 5.1 No 45 1.25 Yes 0 0 No -22 0.57 No 44 45.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47754401 + NM_000251 MSH2 0 . . . 3.18 73.31 21 3.9 No 3 1.42 Yes 0 0 No -23 0.66 No 46 91.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41260846 - NM_007294 BRCA1 0 . . . 3.6 85.02 21 5.04 No 4 1.2 Yes 0 0 No -45 0.62 No 54 54.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41204344 - NM_007294 BRCA1 0 . . . 3.24 77.69 36 6.08 Yes 67 -5.66 No 0 0 No -35 0.62 No 39 62.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68833296 + NM_133509 RAD51B 0 . . . 6.84 79.57 20 4.9 No 1 0.86 Yes 0 0 No -39 0.52 No 52 89.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48021954 + NM_000179 MSH6 0 . . . 3.51 83.04 35 6.07 Yes 33 1.15 Yes 0 0 No -21 0.73 Yes 48 66.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7571904 - NM_000546 TP53 0 . . . 1.62 0 15 2.79 No 16 0.44 No 0 0 No -21 0.77 Yes 42 92.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68374396 + NM_133509 RAD51B 0 . . . 4.81 74.81 71 4.65 No 36 1.28 Yes 0 0 No -25 0.68 Yes 43 74.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41269454 - NM_007294 BRCA1 0 . . . 3.19 0 34 6.32 Yes 71 0.68 No 0 0 No -33 0.86 Yes 44 66.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75487970 - NM_001040108 MLH3 0 . . . 2.32 0 19 4.89 No 24 0.85 Yes 0 0 No -25 0.59 No 34 94.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47798975 + NM_000251 MSH2 0 . . . 0.66 63.47 34 5.58 Yes 36 1.56 Yes 0 0 No -33 0.6 No 52 26.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108230329 + NM_000051 ATM 0 . . . 5.76 75.42 18 4.8 No 4 0.37 No 0 0 No -21 0.48 No 53 62.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56771059 + NM_058216 RAD51C 0 . . . 5.63 72.17 39 6.13 Yes -2 0.21 No 0 0 No -29 0.79 Yes 50 79.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190678631 + NM_000534 PMS1 0 . . . 2.01 65.46 10 5.1 No 57 0.26 No 0 0 No -23 0.66 No 33 42.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68611253 + NM_133509 RAD51B 0 . . . 3.98 78.73 25 5.39 No 13 0.99 Yes 0 0 No -22 0.73 Yes 45 97.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131948978 + NM_005732 RAD50 0 . . . 5.23 0 29 4.46 No 9 1.08 Yes 0 0 No -28 0.68 Yes 48 75.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68503983 + NM_133509 RAD51B 0 . . . 9.87 86.67 21 5.4 No NA NA NA 0 0 No -20 0.88 Yes 33 18.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68737157 + NM_133509 RAD51B 0 . . . 9.07 80.87 29 5.83 Yes 44 0.91 Yes 0 0 No -28 0.36 No 50 62.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47642033 + NM_000251 MSH2 0 . . . 9.21 86.81 22 3.29 No 67 0.87 Yes 0 0 No -27 0.68 Yes 48 81.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108147138 + NM_000051 ATM 0 . . . 3.81 71.86 27 5.2 No 23 0.82 Yes 0 0 No -26 0.64 No 35 53.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21984492 - NM_000077 CDKN2A 0 . . . 0.39 77.42 37 6.28 Yes 39 -2.84 No 0 0 No -30 0.35 No 45 71.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131916302 + NM_005732 RAD50 0 . . . 1.69 64.24 38 5.19 No 51 0.96 Yes 0 0 No -27 0.77 Yes 53 71.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7567942 - NM_000546 TP53 0 . . . 2.28 80.22 27 5.2 No 58 -3.79 No 0 0 No -52 0.6 No 53 53.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32930175 + NM_000059 BRCA2 0 . . . 5.77 81.49 17 5.57 Yes 2 0.13 No 0 0 No -53 0.79 Yes 47 76.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131974624 + NM_005732 RAD50 0 . . . 8.48 91.93 27 4.88 No 4 0.25 No 0 0 No -26 0.67 Yes 43 64.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75508470 - NM_001040108 MLH3 0 . . . 5.55 74.35 22 4.65 No 22 1.23 Yes 0 0 No -45 0.27 No 49 47.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108098885 + NM_000051 ATM 0 . . . 6.43 83.59 26 6.38 Yes 42 0.28 No 0 0 No -29 0.63 No 47 90.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68369667 + NM_133509 RAD51B 0 . . . 6.69 83.84 38 6.07 Yes 9 1.67 Yes 0 0 No -26 0.27 No 43 86.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69059856 + NM_133509 RAD51B 0 . . . 8.47 83.27 12 5.57 Yes 6 1.01 Yes 0 0 No -28 0.59 No 52 51.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69051496 + NM_133509 RAD51B 0 . . . 2.88 71.28 17 4.01 No 46 0.15 No 0 0 No -22 0.78 Yes 50 50.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108155922 + NM_000051 ATM 0 . . . 7.94 84.8 16 5.2 No 2 1.22 Yes 0 0 No -20 0.53 No 55 54.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68926179 + NM_133509 RAD51B 0 . . . 1.36 0 25 4.87 No 11 0.3 No 0 0 No -24 0.74 Yes 47 77.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69033014 + NM_133509 RAD51B 0 . . . 4.85 77.33 44 6.55 Yes 28 2.06 Yes 0 0 No -28 0.36 No 52 79.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23651139 - NM_024675 PALB2 0 . . . 1.09 83.14 25 4.59 No 70 -2.36 No 0 0 No -24 0.77 Yes 41 92.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68645648 + NM_133509 RAD51B 0 . . . 5.08 77.11 25 5.19 No 19 0.36 No 0 0 No -24 0.74 Yes 39 74.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69048170 + NM_133509 RAD51B 0 . . . 5.98 78.73 11 7.12 Yes 2 0.5 No 0 0 No -28 0.71 Yes 41 62.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89626097 + NM_000314 PTEN 0 . . . 0.85 77.04 80 7.56 Yes 11 0.06 No 0 0 No -25 0.6 No 47 81.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47657376 + NM_000251 MSH2 0 . . . 5.75 84.24 28 6.02 Yes 4 1.27 Yes 0 0 No -27 0.92 Yes 54 56.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84388179 - NM_139076 FAM175A 0 . . . 5.05 90.63 15 6.72 Yes 8 1.1 Yes 0 0 No -23 0.68 Yes 46 75.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90993964 - NM_002485 NBN 0 . . . 5.11 77.88 31 6.44 Yes 20 0.58 No 0 0 No -30 0.75 Yes 42 66.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68295352 + NM_133509 RAD51B 0 . . . 2.98 75.33 28 6.7 Yes 56 0.25 No 0 0 No -28 0.79 Yes 26 73.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75485011 - NM_001040108 MLH3 0 . . . 3.19 76.05 27 5.2 No -3 0.36 No 0 0 No -26 0.34 No 44 83.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90958116 - NM_002485 NBN 0 . . . 3.98 77.68 29 5.56 Yes 10 0.67 No 0 0 No -28 0.61 No 48 75.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84381958 - NM_139076 FAM175A 0 . . . 2.97 86.31 24 5.42 No 33 1.11 Yes 0 0 No -23 0.48 No 50 79.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23637275 - NM_024675 PALB2 0 . . . 5.43 86.68 10 4 No 61 1.47 Yes 0 0 No -20 0.26 No 21 67.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190652914 + NM_000534 PMS1 0 . . . 2.25 80.81 24 7.42 Yes 17 0.78 Yes 0 0 No -23 0.91 Yes 46 74.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68485303 + NM_133509 RAD51B 0 . . . 7.34 80.93 14 5.57 Yes 39 0.71 No 0 0 No -28 0.38 No 49 48.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89677361 + NM_000314 PTEN 0 . . . 8.51 85.14 25 3.8 No 17 2.6 Yes 0 0 No -24 0.77 Yes 41 92.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68852041 + NM_133509 RAD51B 0 . . . 4.16 76.39 30 4.37 No 1 0.25 No 0 0 No -24 0.65 No 38 70.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68585226 + NM_133509 RAD51B 0 . . . 7.64 82.87 11 5 No 21 0.33 No 0 0 No -22 0.82 Yes 43 85.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59915687 - NM_032043 BRIP1 0 . . . 1.89 79.63 31 4.2 No 60 1.02 Yes 0 0 No -26 0.38 No 54 74.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47697491 + NM_000251 MSH2 0 . . . 2.01 80.86 48 5.25 No 19 1.02 Yes 0 0 No -23 0.5 No 47 91.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68307469 + NM_133509 RAD51B 0 . . . 7.9 86.28 37 6.91 Yes 8 1.05 Yes 0 0 No -36 0.64 No 45 59.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1207446 + NM_000455 STK11 0 . . . 4.07 81.42 21 5.2 No 58 0.08 No 0 0 No -20 0.33 No 33 62.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68829292 + NM_004360 CDH1 0 . . . 0.26 0 51 6.35 Yes 22 -3.83 No 0 0 No -35 0.51 No 11 48.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183513 - NM_005591 MRE11 0 . . . 3.3 74.1 17 5.29 No 5 0.31 No 0 0 No -16 0.51 No 29 63.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32926124 + NM_000059 BRCA2 0 . . . 6.15 80.12 17 4.8 No 8 1.24 Yes 0 0 No -18 0.35 No 50 91.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108172881 + NM_000051 ATM 0 . . . 4.54 71.98 40 7.48 Yes 16 0.4 No 0 0 No -25 0.32 No 46 61.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32973440 + NM_000059 BRCA2 0 . . . 2.04 75.8 14 4.78 No 8 0.5 No 0 0 No -26 0.52 No 50 89.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29127369 - NM_001005735 CHEK2 0 . . . 6.46 82.31 45 6.68 Yes 59 0.86 Yes 0 0 No -42 0.52 No 40 34.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190662321 + NM_000534 PMS1 0 . . . 0.68 70.44 36 6.78 Yes 65 -4.86 No 0 0 No -29 0.62 No 47 66.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190738150 + NM_000534 PMS1 0 . . . 5.58 74.14 21 4.9 No 1 1.13 Yes 0 0 No -20 0.85 Yes 53 43.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32964009 + NM_000059 BRCA2 0 . . . 0.07 78.4 34 6.09 Yes 32 1.1 Yes 0 0 No -25 0.37 No 44 84.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68769979 + NM_004360 CDH1 0 . . . 5.49 81.28 34 6.08 Yes 5 1.31 Yes 0 0 No -30 0.6 No 46 65.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89688066 + NM_000314 PTEN 0 . . . 3.14 66.44 11 4.12 No -3 0.99 Yes 0 0 No -31 0.73 Yes 38 80.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32891554 + NM_000059 BRCA2 0 . . . 4.31 80.69 16 5.04 No 5 1.44 Yes 0 0 No -22 0.82 Yes 42 83.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59877810 - NM_032043 BRIP1 0 . . . 2.88 78.91 19 4.45 No 1 0.79 Yes 0 0 No -18 0.44 No 45 74.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131966079 + NM_005732 RAD50 0 . . . 4.89 80.11 30 6.28 Yes -2 0.54 No 0 0 No -29 0.63 No 46 94.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68960301 + NM_133509 RAD51B 0 . . . 6.12 85.36 15 4.58 No 69 -2.31 No 0 0 No -50 0.27 No 49 62.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59802158 - NM_032043 BRIP1 0 . . . 5.11 86.48 18 6.86 Yes 28 0.45 No 0 0 No -25 0.34 No 43 73.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68374741 + NM_133509 RAD51B 0 . . . 5.19 88.91 25 5.1 No 0 0.53 No 0 0 No -42 0.72 Yes 47 79.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89622931 + NM_000314 PTEN 0 . . . 4.23 81.06 27 5.31 No 17 1.18 Yes 0 0 No -29 0.57 No 41 46.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190716172 + NM_000534 PMS1 0 . . . 1.22 61.85 14 5.55 No 19 0.04 No 0 0 No -33 0.52 No 43 58.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94194236 - NM_005591 MRE11 0 . . . 2.47 64.98 26 4.64 No 41 1.17 Yes 20 0.33 Yes -25 0.65 No 39 52.35 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 59879600 - NM_032043 BRIP1 0 . . . 2.66 69.51 30 6.49 Yes -1 0.7 No 0 0 No -38 0.45 No 47 45.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68804814 + NM_004360 CDH1 0 . . . 0.09 0 17 5.98 Yes -4 0.05 No 18 0.49 Yes -33 0.56 No 39 51.67 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr7 152370399 - NM_005431 XRCC2 0 . . . 0.59 74.68 28 5.24 No 31 -3.05 No 0 0 No -23 0.47 No 36 60.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59764165 - NM_032043 BRIP1 0 . . . 4.93 77.88 27 5.83 Yes 42 0.87 Yes 0 0 No -21 0.46 No 48 58.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68795163 + NM_133509 RAD51B 0 . . . 2.1 81.06 29 5.87 Yes 50 -3.71 No 0 0 No -28 0.73 Yes 48 81.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47678504 + NM_000251 MSH2 0 . . . 0.01 68.48 17 4.8 No 3 0.17 No 0 0 No -25 0.5 No 55 36.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68285184 + NM_133509 RAD51B 0 . . . 0.12 73.57 22 6.32 Yes 61 -3.66 No 0 0 No -21 0.87 Yes 52 51.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68569684 + NM_133509 RAD51B 0 . . . 1.35 69.71 14 3.96 No 72 -2.6 No 0 0 No -21 0.45 No 44 41.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190649893 + NM_000534 PMS1 0 . . . 3.04 64.61 42 6.82 Yes 41 0.54 No 0 0 No -23 0.5 No 51 45.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59868310 - NM_032043 BRIP1 0 . . . 3.25 71.28 39 5.05 No 34 1.08 Yes 0 0 No -36 0.65 No 33 64.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56777454 + NM_058216 RAD51C 0 . . . 0.31 74.3 38 5.78 Yes -4 1.36 Yes 0 0 No -29 0.71 Yes 53 62.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108199250 + NM_000051 ATM 0 . . . 0.61 84.17 17 6.98 Yes 37 1.56 Yes 0 0 No -16 0.48 No 54 43.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68619593 + NM_133509 RAD51B 0 . . . 9.1 82.41 19 5.31 No 13 0.62 No 0 0 No -28 0.8 Yes 50 54.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69030299 + NM_133509 RAD51B 0 . . . 5.91 73.94 17 4.84 No 39 1.08 Yes 0 0 No -53 0.5 No 47 64.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41249974 - NM_007294 BRCA1 0 . . . 3.06 68.88 26 6.16 Yes 28 0.29 No 0 0 No -25 0.98 Yes 30 48.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104176457 - NM_001100119 XRCC3 0 . . . 2.49 70.79 29 5.43 No 45 0.64 No 0 0 No -28 0.77 Yes 13 44.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41208663 - NM_007294 BRCA1 0 . . . 3.54 82.02 18 4.75 No 2 1.5 Yes 0 0 No -17 0.35 No 15 36.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90995361 - NM_002485 NBN 0 . . . 6.66 82.78 21 5.19 No 45 0.95 Yes 0 0 No -20 0.2 No 48 62.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68639073 + NM_133509 RAD51B 0 . . . 1.59 61.35 22 5.14 No 23 1.67 Yes 0 0 No -21 0.74 Yes 35 51.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131978840 + NM_005732 RAD50 0 . . . 7.55 78.82 22 5 No 15 1.65 Yes 0 0 No -21 0.85 Yes 43 86.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47646082 + NM_000251 MSH2 0 . . . 3.59 75.95 14 5.1 No 30 0.82 Yes 0 0 No -21 0.75 Yes 40 22.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68858616 + NM_004360 CDH1 0 . . . 0.65 78.71 46 6.49 Yes 6 0.73 No 0 0 No -16 0.68 Yes 51 72.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59879720 - NM_032043 BRIP1 0 . . . 1.88 81.72 31 5.07 No 3 0.82 Yes 0 0 No -23 0.45 No 50 72.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32911619 + NM_000059 BRCA2 0 . . . 1.32 0 21 5.04 No 72 -2.92 No 0 0 No -20 0.67 Yes 46 55.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131920172 + NM_005732 RAD50 0 . . . 4.24 66.17 38 4.73 No 40 0.07 No 0 0 No -25 0.61 No 44 56.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108113929 + NM_000051 ATM 0 . . . 0.37 0 39 7.12 Yes 20 0.95 Yes 0 0 No -34 0.86 Yes 43 65.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56810561 + NM_058216 RAD51C 0 . . . 3.8 80.12 25 5.2 No 7 1.16 Yes 0 0 No -24 0.73 Yes 51 77.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41209924 - NM_007294 BRCA1 0 . . . 0.05 0 25 5.12 No 9 1.4 Yes 0 0 No -20 0.55 No 49 56.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68624987 + NM_133509 RAD51B 0 . . . 1.38 65.49 22 6.24 Yes 64 -4.86 No 0 0 No -21 0.65 No 50 61.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152343377 - NM_005431 XRCC2 0 . . . 5.49 79.86 21 5 No 73 -4.46 No 0 0 No -20 0.79 Yes 46 31.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90952742 - NM_002485 NBN 0 . . . 7.46 84.47 24 6.62 Yes 13 -0.98 No 0 0 No -23 0.7 Yes 42 90.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48026980 + NM_000179 MSH6 0 . . . 1.11 0 22 4.7 No 19 0.64 No 0 0 No -26 0.35 No 39 75.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68474512 + NM_133509 RAD51B 0 . . . 0.36 68.94 34 6.21 Yes 52 0.07 No 0 0 No -33 0.53 No 43 54.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68480703 + NM_133509 RAD51B 0 . . . 1.34 61.97 23 3.8 No 11 0.29 No 0 0 No -23 0.67 Yes 47 56.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59855978 - NM_032043 BRIP1 0 . . . 3.49 85.02 23 3.97 No 41 0.02 No 0 0 No -19 0.53 No 53 51.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47782749 + NM_000251 MSH2 0 . . . 5.88 83.87 46 6.2 Yes 44 0.72 No 0 0 No -34 0.89 Yes 46 36.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59847101 - NM_032043 BRIP1 0 . . . 3.28 0 15 5.18 No 33 0.87 Yes 0 0 No -26 0.86 Yes 36 85.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7578205 - NM_000546 TP53 0 . . . 2.75 73.45 35 6.38 Yes 58 0.72 No 0 0 No -34 0.69 Yes 48 82.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75520032 - NM_001040108 MLH3 0 . . . 3.31 83.42 31 6.24 Yes 71 0.58 No 0 0 No -30 0.63 No 49 65.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59905628 - NM_032043 BRIP1 0 . . . 4.64 75.77 24 5.1 No -1 0.82 Yes 0 0 No -23 0.88 Yes 53 70.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89656046 + NM_000314 PTEN 0 . . . 2.79 84.47 17 3.38 No 69 -4.5 No 0 0 No -25 0.74 Yes 50 69.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75493353 - NM_001040108 MLH3 0 . . . 0.22 79.81 37 7.55 Yes 61 0.76 No 0 0 No -36 0.75 Yes 42 53.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47656245 + NM_000251 MSH2 0 . . . 2.81 68.95 20 4.92 No 16 1.1 Yes 0 0 No -42 0.42 No 42 88.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94204474 - NM_005591 MRE11 0 . . . 6.47 82.79 28 5.39 No 1 -2.19 No 0 0 No -20 0.51 No 49 54.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68878617 + NM_133509 RAD51B 0 . . . 4.02 80.68 15 6.44 Yes 4 1.08 Yes 0 0 No -23 0.48 No 48 41.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68840442 + NM_004360 CDH1 0 . . . 5.75 84.15 22 6.03 Yes 8 1.04 Yes 0 0 No -21 0.85 Yes 54 59.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32956660 + NM_000059 BRCA2 0 . . . 4.71 74.77 21 5.09 No 66 -4.12 No 0 0 No -20 0.88 Yes 46 64.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89679467 + NM_000314 PTEN 0 . . . 7.7 80.34 31 5.13 No 66 1.55 Yes 0 0 No -30 0.39 No 39 93.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59765758 - NM_032043 BRIP1 0 . . . 3.47 77.39 21 7.21 Yes 59 1.46 Yes 0 0 No -20 0.61 No 42 95.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68489206 + NM_133509 RAD51B 0 . . . 1.68 0 33 9.4 Yes 55 0.58 No 0 0 No -32 0.94 Yes 51 39.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69141357 + NM_133509 RAD51B 0 . . . 1.21 74.96 30 3.96 No 64 -4.41 No 0 0 No -29 0.86 Yes 50 50.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68759487 + NM_133509 RAD51B 0 . . . 5.3 84.65 28 4.18 No 67 -4.71 No 0 0 No -21 0.43 No 44 50.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89630714 + NM_000314 PTEN 0 . . . 4.05 77.74 59 7.18 Yes 76 0.76 No 0 0 No -30 0.54 No 48 57.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89708576 + NM_000314 PTEN 0 . . . 4.25 76.91 17 6.08 Yes 47 2.18 Yes 0 0 No -16 0.38 No 43 37.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47710141 + NM_000251 MSH2 0 . . . 4.26 70.46 41 7.11 Yes 6 0.37 No 0 0 No -24 0.56 No 45 49.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7585665 - NM_000546 TP53 0 . . . 0.12 61.05 31 5.38 No 54 1.16 Yes 0 0 No -23 0.31 No 42 39.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90966705 - NM_002485 NBN 0 . . . 3.77 67.72 21 4.47 No 16 1.35 Yes 0 0 No -20 0.79 Yes 42 56.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190677794 + NM_000534 PMS1 0 . . . 2.25 74 53 5.6 Yes 26 0.93 Yes 0 0 No -27 0.55 No 32 56.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47671480 + NM_000251 MSH2 0 . . . 1.52 72.23 30 5.38 No -3 1.05 Yes 0 0 No -24 0.61 No 46 79.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89648966 + NM_000314 PTEN 0 . . . 0.98 70.45 25 5.39 No 50 -4.52 No 0 0 No -24 0.68 Yes 49 39.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68975334 + NM_133509 RAD51B 0 . . . 4.48 72.25 21 6.16 Yes 9 1.63 Yes 0 0 No -39 0.43 No 49 72.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59882543 - NM_032043 BRIP1 0 . . . 6.1 82.78 17 6.08 Yes 36 1.86 Yes 0 0 No -52 0.65 No 50 62.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68334466 + NM_133509 RAD51B 0 . . . 4.08 0 29 5.29 No 4 0.87 Yes 0 0 No -24 0.9 Yes 54 57.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68329622 + NM_133509 RAD51B 0 . . . 8.91 88.38 27 5.18 No 37 0.78 Yes 0 0 No -21 0.47 No 41 56.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68288293 + NM_133509 RAD51B 0 . . . 2.65 83.88 11 3.96 No 76 0.88 Yes 0 0 No -30 0.33 No 50 91.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23648601 - NM_024675 PALB2 0 . . . 3.21 70.73 21 5.74 Yes 71 0.4 No 0 0 No -20 0.87 Yes 41 66.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32974570 + NM_000059 BRCA2 0 . . . 7.74 86.23 22 5 No 21 0.97 Yes 0 0 No -21 0.77 Yes 37 61.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47738119 + NM_000251 MSH2 0 . . . 5.86 75.83 24 4.86 No 32 1.23 Yes 0 0 No -23 0.81 Yes 46 86.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68934945 + NM_133509 RAD51B 0 . . . 1.02 74.7 19 4.89 No 73 1.31 Yes 0 0 No -23 0.5 No 46 78.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68862602 + NM_004360 CDH1 0 . . . 0.1 80.87 19 4.8 No 65 0.95 Yes 0 0 No -24 0.55 No 44 55.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89713259 + NM_000314 PTEN 0 . . . 0.49 69.97 17 5.48 No 4 0.13 No 0 0 No -42 0.56 No 54 89.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68712189 + NM_133509 RAD51B 0 . . . 5.15 75.57 28 5.39 No 14 1.16 Yes 0 0 No -27 0.58 No 44 88.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68316619 + NM_133509 RAD51B 0 . . . 1.83 67.87 54 8.49 Yes 28 0.9 Yes 0 0 No -48 0.29 No 39 62.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23617128 - NM_024675 PALB2 0 . . . 1.3 72.43 37 6.57 Yes 63 0.54 No 0 0 No -37 0.43 No 45 54.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68877229 + NM_133509 RAD51B 0 . . . 3.18 0 20 4.69 No 17 0.56 No 0 0 No -40 0.49 No 41 75.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90979788 - NM_002485 NBN 0 . . . 1.29 0 18 5.35 No 11 2.18 Yes 0 0 No -26 0.45 No 19 51.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131902313 + NM_005732 RAD50 0 . . . 7.04 81.39 27 5.02 No 52 0.96 Yes 0 0 No -26 0.86 Yes 44 67.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56791278 + NM_058216 RAD51C 0 . . . 4.36 0 33 6.63 Yes 55 0.23 No 0 0 No -26 0.42 No 40 82.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68741866 + NM_133509 RAD51B 0 . . . 10.45 88.52 28 5.83 Yes 48 0.8 Yes 0 0 No -27 0.72 Yes 37 77.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68708615 + NM_133509 RAD51B 0 . . . 2.15 78.97 18 4.14 No 58 1.33 Yes 0 0 No -27 0.36 No 48 52.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68405734 + NM_133509 RAD51B 0 . . . 2 61.25 34 5.74 Yes 6 0.58 No 0 0 No -47 0.35 No 52 65.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7569356 - NM_000546 TP53 0 . . . 9.85 79.8 23 3.72 No 36 -1.6 No 0 0 No -22 0.68 Yes 41 27.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108126115 + NM_000051 ATM 0 . . . 3.84 66.03 31 5.89 Yes 9 0.84 Yes 0 0 No -21 0.61 No 49 42.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40986456 + NM_001164269 RAD51 0 . . . 0.97 72.25 22 7.15 Yes 34 1.22 Yes 0 0 No -21 0.67 Yes 24 61.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41266976 - NM_007294 BRCA1 0 . . . 0.36 82.26 28 4.31 No 27 0.78 Yes 0 0 No -27 0.75 Yes 43 61.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41195783 - NM_007294 BRCA1 0 . . . 1.34 65.76 17 5.37 No 60 1.23 Yes 0 0 No -22 0.58 No 40 64.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68531517 + NM_133509 RAD51B 0 . . . 4.78 76.74 32 5.66 Yes 43 1.28 Yes 0 0 No -31 0.64 No 26 79.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105179146 + NM_021930 RINT1 0 . . . 9.84 80.01 41 5.62 Yes 57 1.17 Yes 0 0 No -30 0.82 Yes 38 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59846368 - NM_032043 BRIP1 0 . . . 1.98 0 32 5.52 No 57 0.73 No 0 0 No -31 0.69 Yes 48 53.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108153041 + NM_000051 ATM 0 . . . 4.78 83.11 23 4.9 No 1 1 Yes 0 0 No -22 0.88 Yes 46 59.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90997863 - NM_002485 NBN 0 . . . 4.19 0 24 6.23 Yes 22 1.39 Yes 0 0 No -23 0.65 No 37 61.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68694369 + NM_133509 RAD51B 0 . . . 4.38 80.22 17 5.81 Yes 47 0.87 Yes 0 0 No -16 0.25 No 52 53.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69127208 + NM_133509 RAD51B 0 . . . 2.66 75.4 38 5.07 No -2 0.62 No 0 0 No -25 0.4 No 51 61.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68311932 + NM_133509 RAD51B 0 . . . 0.32 72.08 26 5.86 Yes 15 -2.75 No 0 0 No -30 0.58 No 43 74.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68840233 + NM_133509 RAD51B 0 . . . 0.73 67.65 16 4.58 No 61 0.39 No 0 0 No -42 0.51 No 49 28.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68617898 + NM_133509 RAD51B 0 . . . 4.81 76.61 16 5.04 No 67 0.73 No 0 0 No -23 0.57 No 47 65.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32967100 + NM_000059 BRCA2 0 . . . 5.63 74.68 15 4.87 No 62 0.99 Yes 0 0 No -23 0.39 No 44 60.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68832165 + NM_133509 RAD51B 0 . . . 2.06 81.12 36 5.17 No 39 0.64 No 0 0 No -24 0.88 Yes 42 93.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69019518 + NM_133509 RAD51B 0 . . . 7.75 83.95 26 7.55 Yes 72 1.16 Yes 0 0 No -25 0.95 Yes 43 89.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68970932 + NM_133509 RAD51B 0 . . . 4.76 79.58 18 4.8 No 72 -6.37 No 0 0 No -20 0.62 No 49 60.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47729229 + NM_000251 MSH2 0 . . . 5.43 75.99 26 5.53 No 5 0.82 Yes 0 0 No -26 0.4 No 53 53.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68846301 + NM_004360 CDH1 0 . . . 0.66 67.22 13 5.57 Yes 64 0.69 No 0 0 No -34 0.54 No 54 70.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68862415 + NM_133509 RAD51B 0 . . . 0.52 74.54 20 5.85 Yes 63 -3.37 No 0 0 No -19 0.54 No 28 71.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68951779 + NM_133509 RAD51B 0 . . . 0.83 74.28 24 5.43 No 9 1.57 Yes 0 0 No -23 0.71 Yes 49 88.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68613390 + NM_133509 RAD51B 0 . . . 2.29 63.77 31 6.37 Yes -4 0.8 Yes 0 0 No -30 0.67 Yes 62 30.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68330726 + NM_133509 RAD51B 0 . . . 2.92 71.89 30 6.48 Yes 48 -2.84 No 0 0 No -29 0.9 Yes 58 47.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89641915 + NM_000314 PTEN 0 . . . 9.31 81.67 30 5.43 No 10 0.5 No 0 0 No -27 0.82 Yes 47 63.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41225922 - NM_007294 BRCA1 0 . . . 1.5 58.85 20 4.16 No 36 0.63 No 0 0 No -19 0.64 No 39 28.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94188168 - NM_005591 MRE11 0 . . . 1.22 80.73 23 5.38 No 52 -3.3 No 0 0 No -22 0.69 Yes 35 68.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29085091 - NM_001005735 CHEK2 0 . . . 0.92 62.53 17 5.49 No 5 0.02 No 0 0 No -26 0.8 Yes 31 52.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68630445 + NM_133509 RAD51B 0 . . . 0.06 61.25 14 5 No 45 1.56 Yes 0 0 No -23 0.39 No 13 55.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37060498 + NM_000249 MLH1 0 . . . 0.65 0 17 4.8 No 74 0.67 No 0 0 No -24 0.62 No 32 67.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41248317 - NM_007294 BRCA1 0 . . . 5.91 88.37 24 5.39 No 14 1.51 Yes 0 0 No -23 0.87 Yes 44 77.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68524661 + NM_133509 RAD51B 0 . . . 2.86 66.08 24 5.89 Yes 61 -3.67 No 0 0 No -23 0.68 Yes 38 51.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56775393 + NM_058216 RAD51C 0 . . . 1.58 83.57 22 4.9 No 70 0.86 Yes 0 0 No -21 0.65 No 50 67.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68542831 + NM_133509 RAD51B 0 . . . 0.52 57.64 19 4.8 No 49 0.95 Yes 0 0 No -51 0.59 No 45 42.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6017876 - NM_000535 PMS2 0 . . . 6.84 85.67 29 5.73 Yes 43 0.39 No 0 0 No -26 0.71 Yes 52 79.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215610227 - NM_000465 BARD1 0 . . . 7.18 76.98 23 4.9 No 69 0.7 No 0 0 No -22 0.82 Yes 50 55.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32969567 + NM_000059 BRCA2 0 . . . 1.71 67.5 26 5.06 No 55 1.32 Yes 0 0 No -58 0.85 Yes 41 74.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68401689 + NM_133509 RAD51B 0 . . . 4.91 75.9 56 6.08 Yes 35 1.3 Yes 0 0 No -25 0.82 Yes 41 87.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190677903 + NM_000534 PMS1 0 . . . 1.72 71.24 28 4.84 No 71 -5.65 No 0 0 No -27 0.58 No 49 66.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68986244 + NM_133509 RAD51B 0 . . . 2.15 0 26 5.47 No 34 -1.34 No 0 0 No -25 0.77 Yes 47 74.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47660663 + NM_000251 MSH2 0 . . . 1.85 67.19 27 5.74 Yes 30 2.22 Yes 0 0 No -26 0.75 Yes 28 56.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215629345 - NM_000465 BARD1 0 . . . 0.26 65.77 36 6.08 Yes 32 0.8 Yes 0 0 No -26 0.62 No 47 49.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68662596 + NM_133509 RAD51B 0 . . . 2.28 80.22 19 4.73 No 58 -3.87 No 0 0 No -22 0.65 No 43 64.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68886604 + NM_133509 RAD51B 0 . . . 0.03 0 28 6.15 Yes 44 -0.84 No 0 0 No -28 0.59 No 38 51.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190659051 + NM_000534 PMS1 0 . . . 1.11 74.76 16 4.69 No 35 1.2 Yes 0 0 No -18 0.56 No 45 87.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68759097 + NM_133509 RAD51B 0 . . . 2.68 80.85 24 5.36 No 31 0.97 Yes 0 0 No -23 0.91 Yes 50 55.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90972517 - NM_002485 NBN 0 . . . 0.3 58.58 28 6 Yes 34 0.37 No 0 0 No -31 0.8 Yes 21 56.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68585960 + NM_133509 RAD51B 0 . . . 1.35 81.47 22 4.38 No 35 1.13 Yes 0 0 No -21 0.9 Yes 18 87.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68828708 + NM_004360 CDH1 0 . . . 5.21 84.22 19 5 No 33 1 Yes 0 0 No -27 0.54 No 50 96.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47705842 + NM_000251 MSH2 0 . . . 5.37 77.86 17 5.2 No 47 0.58 No 0 0 No -23 0.56 No 48 69.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37049677 + NM_000249 MLH1 0 . . . 2.71 84.79 23 5.29 No 2 1.51 Yes 0 0 No -25 0.7 Yes 16 55.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190673589 + NM_000534 PMS1 0 . . . 1.24 70.05 21 7.74 Yes 66 0.89 Yes 0 0 No -20 0.79 Yes 41 82.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59800415 - NM_032043 BRIP1 0 . . . 1.05 63.81 56 7.61 Yes 49 1.82 Yes 0 0 No -24 0.61 No 27 69.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215663290 - NM_000465 BARD1 0 . . . 4.83 77.75 23 5.39 No 5 0.66 No 0 0 No -24 0.44 No 53 55.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68612340 + NM_133509 RAD51B 0 . . . 4.34 84.41 15 5.39 No 4 1.27 Yes 0 0 No -28 0.24 No 38 55.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190741267 + NM_000534 PMS1 0 . . . 3.55 62.01 27 6.56 Yes 49 1.63 Yes 0 0 No -26 0.69 Yes 9 26.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190734250 + NM_000534 PMS1 0 . . . 4.44 82.63 17 6.48 Yes 50 0.67 No 0 0 No -16 0.65 No 46 54.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68680839 + NM_133509 RAD51B 0 . . . 5.57 90.81 26 4.59 No 62 0 No 0 0 No -20 0.57 No 44 39.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807294 + NM_004360 CDH1 0 . . . 6.72 91.19 13 4.8 No 9 1.14 Yes 0 0 No -16 0.37 No 49 94.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190711108 + NM_000534 PMS1 0 . . . 2.61 71.11 27 5.61 Yes 69 -3.21 No 0 0 No -26 0.66 No 52 48.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68946267 + NM_133509 RAD51B 0 . . . 4.39 82.53 53 5.75 Yes 14 1.22 Yes 0 0 No -27 0.73 Yes 44 70.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68443859 + NM_133509 RAD51B 0 . . . 7.05 77.5 19 4.36 No 29 0.62 No 0 0 No -18 0.63 No 42 51.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68284908 + NM_133509 RAD51B 0 . . . 1.71 79.6 36 5.99 Yes 58 1.73 Yes 0 0 No -35 0.45 No 54 62.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69117606 + NM_133509 RAD51B 0 . . . 7.07 85.07 21 4.58 No 66 -2.91 No 0 0 No -20 0.44 No 43 69.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47688687 + NM_000251 MSH2 0 . . . 6.69 81.15 39 5.47 No 17 0.44 No 0 0 No -23 0.61 No 48 47.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190727353 + NM_000534 PMS1 0 . . . 7.9 97.03 21 4.69 No 4 1.33 Yes 0 0 No -49 0.72 Yes 44 67.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94169648 - NM_005591 MRE11 0 . . . 1.49 77.46 33 7.19 Yes 22 0.53 No 0 0 No -32 0.94 Yes 47 88.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190719892 + NM_000534 PMS1 0 . . . 4.86 73.76 19 5 No 66 -5.2 No 0 0 No -18 0.53 No 51 82.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68777126 + NM_004360 CDH1 0 . . . 2.04 70.1 64 8.51 Yes 66 1.84 Yes 0 0 No -48 0.62 No 48 65.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68991421 + NM_133509 RAD51B 0 . . . 8.55 87.48 19 5 No 68 1.39 Yes 0 0 No -16 0.51 No 38 52.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41268002 - NM_007294 BRCA1 0 . . . 4.67 67.62 18 5.39 No 58 1.23 Yes 0 0 No -17 0.64 No 42 37.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68621218 + NM_133509 RAD51B 0 . . . 0.02 67.51 18 5.38 No 42 0.62 No 0 0 No -22 0.42 No 51 84.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37055233 + NM_000249 MLH1 0 . . . 2.23 65.14 35 6.36 Yes 59 0.64 No 0 0 No -34 0.71 Yes 49 29.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94182608 - NM_005591 MRE11 0 . . . 5.68 80.93 34 6.28 Yes -4 0.64 No 0 0 No -33 0.56 No 49 71.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68710128 + NM_133509 RAD51B 0 . . . 1.04 79.56 40 7.05 Yes 10 1.21 Yes 0 0 No -40 0.58 No 48 86.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75479152 - NM_001040108 MLH3 0 . . . 6.55 76.01 14 4 No 16 0.53 No 0 0 No -33 0.52 No 42 82.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47718983 + NM_000251 MSH2 0 . . . 4 65.14 38 6.06 Yes 64 0.24 No 0 0 No -33 0.55 No 47 65.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68311158 + NM_133509 RAD51B 0 . . . 3.6 78.3 16 4.69 No 7 0.77 Yes 0 0 No -58 0.62 No 47 62.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33439853 - NM_002878 RAD51D 0 . . . 4.73 75.47 24 4.26 No 55 -2.46 No 0 0 No -23 0.75 Yes 41 61.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108193000 + NM_000051 ATM 0 . . . 1.08 84.22 15 4.31 No 33 0.98 Yes 0 0 No -21 0.61 No 25 48.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69102459 + NM_133509 RAD51B 0 . . . 0.66 62.17 20 3.64 No 74 0.92 Yes 0 0 No -19 0.71 Yes 31 64.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94202972 - NM_005591 MRE11 0 . . . 3.37 67.24 18 6.12 Yes 49 2.39 Yes 0 0 No -26 0.74 Yes 33 74.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23620088 - NM_024675 PALB2 0 . . . 0.71 69.03 13 4.36 No 1 0.74 No 0 0 No -22 0.6 No 53 30.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33429680 - NM_002878 RAD51D 0 . . . 5.12 76.72 31 6.35 Yes 44 0.72 No 0 0 No -30 0.9 Yes 32 41.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68656190 + NM_133509 RAD51B 0 . . . 3.65 76.15 55 7.03 Yes 57 0.75 No 0 0 No -35 0.36 No 47 83.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68635047 + NM_133509 RAD51B 0 . . . 6.53 75.43 39 6.3 Yes 20 0.34 No 0 0 No -26 0.65 No 38 80.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68826966 + NM_133509 RAD51B 0 . . . 7.04 79.59 11 5.2 No 28 1.17 Yes 0 0 No -22 0.46 No 46 84.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215659166 - NM_000465 BARD1 0 . . . 0.17 57.88 38 6.27 Yes 0 0.2 No 0 0 No -37 0.38 No 33 73.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131912578 + NM_005732 RAD50 0 . . . 1.44 77.64 39 6.33 Yes 68 1.38 Yes 0 0 No -38 0.82 Yes 44 83.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59834762 - NM_032043 BRIP1 0 . . . 0.75 0 32 5.43 No 6 0.77 No 0 0 No -31 0.89 Yes 41 87.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59756666 - NM_032043 BRIP1 0 . . . 4.39 73.22 21 5.64 Yes 49 0.25 No 0 0 No -20 0.71 Yes 40 64.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68798384 + NM_133509 RAD51B 0 . . . 2.26 79.14 19 5 No 61 -4.88 No 0 0 No -27 0.9 Yes 40 83.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48017686 + NM_000179 MSH6 0 . . . 0.55 0 16 3.84 No 21 0.19 No 0 0 No -24 0.55 No 37 64.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59901677 - NM_032043 BRIP1 0 . . . 5.48 72.82 16 3.57 No 62 0.3 No 0 0 No -29 0.54 No 50 67.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47657831 + NM_000251 MSH2 0 . . . 5.08 75.91 31 5.92 Yes 74 -3.37 No 0 0 No -20 0.71 Yes 41 52.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68734995 + NM_133509 RAD51B 0 . . . 3.7 73.83 14 4.29 No 76 0.91 Yes 0 0 No -20 0.62 No 49 47.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59825930 - NM_032043 BRIP1 0 . . . 0.75 60.54 53 6.77 Yes 16 0.41 No 0 0 No -23 0.78 Yes 45 71.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32917927 + NM_000059 BRCA2 0 . . . 1.04 59.9 19 6.16 Yes 6 0.86 Yes 0 0 No -18 0.84 Yes 38 81.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41196285 - NM_007294 BRCA1 0 . . . 0.68 0 23 7.01 Yes 6 1.29 Yes 0 0 No -31 0.39 No 32 39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37052076 + NM_000249 MLH1 0 . . . 4.17 82.27 18 5.57 Yes 63 -0.6 No 0 0 No -24 0.66 No 23 61.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37033878 + NM_000249 MLH1 0 . . . 7.59 90.21 15 5.08 No 5 0.96 Yes 0 0 No -58 0.54 No 47 61.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68638525 + NM_133509 RAD51B 0 . . . 0.5 65.08 27 6.23 Yes 10 1.4 Yes 0 0 No -26 0.86 Yes 42 78.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47695080 + NM_000251 MSH2 0 . . . 4.49 80.08 15 4.56 No 44 0.29 No 0 0 No -32 0.66 No 31 35.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29123955 - NM_001005735 CHEK2 0 . . . 5.96 73.84 49 7.93 Yes 67 0.88 Yes 0 0 No -38 0.75 Yes 48 80.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68346673 + NM_133509 RAD51B 0 . . . 7.56 90.92 23 4.9 No 16 0.2 No 0 0 No -22 0.8 Yes 42 53.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1229801 + NM_000455 STK11 0 . . . 6.08 84.72 22 4.69 No NA NA NA 0 0 No -19 0.5 No 47 65.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68746211 + NM_133509 RAD51B 0 . . . 1.65 75.35 30 7.31 Yes 0 0.69 No 0 0 No -32 0.78 Yes 51 53.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68917728 + NM_133509 RAD51B 0 . . . 2.67 73.34 15 5.39 No 64 -4.18 No 0 0 No -54 0.63 No 42 68.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47661255 + NM_000251 MSH2 0 . . . 6.58 85.17 12 4.67 No -3 0.45 No 0 0 No -19 0.31 No 48 40.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59903313 - NM_032043 BRIP1 0 . . . 8.99 88.26 19 6.86 Yes 67 0.91 Yes 0 0 No -27 0.62 No 49 91.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89715767 + NM_000314 PTEN 0 . . . 1.7 71.84 87 9.58 Yes 22 0.18 No 0 0 No -30 0.66 No 36 51.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29123850 - NM_001005735 CHEK2 0 . . . 5.89 78.59 23 5.38 No 2 0.37 No 0 0 No -22 0.88 Yes 41 49.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152350704 - NM_005431 XRCC2 0 . . . 2.16 68.59 28 6.78 Yes 31 0.29 No 0 0 No -31 0.71 Yes 46 52.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68685482 + NM_133509 RAD51B 0 . . . 3.6 68.42 17 4.75 No 44 0.19 No 0 0 No -27 0.54 No 44 69.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108150726 + NM_000051 ATM 0 . . . 5.05 80.77 11 4.12 No 67 -5.67 No 0 0 No -28 0.89 Yes 39 95.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75485752 - NM_001040108 MLH3 0 . . . 0.03 0 12 5.2 No 21 0.08 No 0 0 No -23 0.28 No 37 90.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215626945 - NM_000465 BARD1 0 . . . 3.3 76.52 27 6.52 Yes 32 0.69 No 0 0 No -26 0.96 Yes 38 63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68420064 + NM_133509 RAD51B 0 . . . 0.77 76.05 33 8.31 Yes 61 -5.61 No 0 0 No -32 0.76 Yes 47 44.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33448388 - NM_002878 RAD51D 0 . . . 0.18 67.52 45 6.52 Yes 8 0.02 No 0 0 No -26 0.45 No 50 78.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68693689 + NM_133509 RAD51B 0 . . . 2.77 68.16 17 5.29 No 65 0.34 No 0 0 No -21 0.55 No 16 83.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68797319 + NM_133509 RAD51B 0 . . . 7.2 78.99 25 5.39 No 27 -2.08 No 0 0 No -24 0.48 No 41 46.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105181164 + NM_021930 RINT1 0 . . . 3.91 80.62 70 7.77 Yes 69 1.82 Yes 0 0 No -33 0.61 No 42 61.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131935204 + NM_005732 RAD50 0 . . . 4.08 74.87 40 6.1 Yes 12 0.33 No 0 0 No -30 0.51 No 46 79.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29128911 - NM_001005735 CHEK2 0 . . . 0.87 75.1 31 6.99 Yes 36 -2.61 No 0 0 No -30 0.7 Yes 36 52.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89665717 + NM_000314 PTEN 0 . . . 5.15 79.94 29 6.28 Yes -1 0.2 No 0 0 No -24 0.83 Yes 45 62.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131951299 + NM_005732 RAD50 0 . . . 2.35 65.01 15 4.58 No 61 0.86 Yes 0 0 No -35 0.95 Yes 29 55.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190692986 + NM_000534 PMS1 0 . . . 8.05 76.22 20 5.48 No 14 0.31 No 0 0 No -20 0.48 No 43 41.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215641341 - NM_000465 BARD1 0 . . . 1.05 0 25 7.34 Yes 15 1.33 Yes 0 0 No -24 0.86 Yes 43 71.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105202058 + NM_021930 RINT1 0 . . . 2.04 0 36 5.89 Yes 8 0.75 No 0 0 No -35 0.88 Yes 16 69.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131915124 + NM_005732 RAD50 0 . . . 0.85 65.63 13 5.2 No 60 0.86 Yes 0 0 No -24 0.47 No 42 74.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215658101 - NM_000465 BARD1 0 . . . 1.2 0 16 4.69 No 27 1.24 Yes 0 0 No -23 0.31 No 22 66.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190702266 + NM_000534 PMS1 0 . . . 3.37 68.53 26 6.31 Yes 11 0.19 No 0 0 No -25 0.78 Yes 41 61.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68972454 + NM_133509 RAD51B 0 . . . 6.92 80.12 23 5.91 Yes 76 0.02 No 0 0 No -22 0.81 Yes 49 62.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89641198 + NM_000314 PTEN 0 . . . 6.27 86.6 27 5.38 No 76 1.91 Yes 0 0 No -26 0.77 Yes 51 55.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68462084 + NM_133509 RAD51B 0 . . . 1.05 0 9 3.87 No 14 0.15 No 0 0 No -29 0.86 Yes 44 52.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89653180 + NM_000314 PTEN 0 . . . 3.14 67.64 36 5.78 Yes 18 0.31 No 0 0 No -25 0.43 No 40 79.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68584365 + NM_133509 RAD51B 0 . . . 0.04 69.28 28 6.47 Yes 14 -2.92 No 0 0 No -27 0.83 Yes 51 80.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94199403 - NM_005591 MRE11 0 . . . 0.58 0 28 6.23 Yes 69 1.19 Yes 0 0 No -27 0.85 Yes 38 61.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37078217 + NM_000249 MLH1 0 . . . 1.07 75.86 34 6.24 Yes 24 0.68 No 0 0 No -20 0.49 No 30 46.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56786352 + NM_058216 RAD51C 0 . . . 3.61 0 14 6.54 Yes 33 0.56 No 0 0 No -30 0.46 No 41 86.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47739722 + NM_000251 MSH2 0 . . . 1.08 0 34 6.11 Yes 10 0.76 No 0 0 No -33 0.86 Yes 47 53.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68662259 + NM_133509 RAD51B 0 . . . 1.52 67.77 32 5.16 No 62 -3.28 No 0 0 No -31 0.7 Yes 41 74.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68655775 + NM_133509 RAD51B 0 . . . 5.23 79.79 25 6.16 Yes 2 0.95 Yes 0 0 No -24 0.83 Yes 50 78.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37061849 + NM_000249 MLH1 0 . . . 1.1 63.73 22 3.65 No 63 0.95 Yes 0 0 No -27 0.88 Yes 53 57.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68799580 + NM_004360 CDH1 0 . . . 3.17 0 18 4.9 No 18 0.99 Yes 0 0 No -25 0.76 Yes 40 86.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37061334 + NM_000249 MLH1 0 . . . 2.47 85.09 24 7.07 Yes 20 2.02 Yes 0 0 No -23 0.84 Yes 50 75.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68864634 + NM_133509 RAD51B 0 . . . 9.6 79.94 19 4.65 No 21 0.19 No 0 0 No -19 0.86 Yes 37 73.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68946155 + NM_133509 RAD51B 0 . . . 3.37 75.74 20 3.31 No 33 2.01 Yes 0 0 No -30 0.52 No 40 63.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21975263 - NM_000077 CDKN2A 0 . . . 5.61 92.89 25 5.39 No 76 -3.55 No 0 0 No -24 0.94 Yes 38 17.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37047271 + NM_000249 MLH1 0 . . . 2.63 72.2 46 7.34 Yes 45 1.41 Yes 0 0 No -32 0.62 No 26 58.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131898924 + NM_005732 RAD50 0 . . . 0.03 71.64 16 4.41 No -1 0.33 No 0 0 No -26 0.29 No 46 60.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32938980 + NM_000059 BRCA2 0 . . . 7.96 79.18 21 5.79 Yes 29 1.14 Yes 0 0 No -20 0.76 Yes 48 59.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89700084 + NM_000314 PTEN 0 . . . 5.41 71.04 20 4.72 No 23 -3.45 No 0 0 No -31 0.57 No 42 53.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59758727 - NM_032043 BRIP1 0 . . . 1.1 80.53 26 5.1 No 46 -2.16 No 0 0 No -25 0.87 Yes 46 81.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32942707 + NM_000059 BRCA2 0 . . . 3.27 74.7 22 6.93 Yes 75 1.93 Yes 0 0 No -21 0.87 Yes 34 82.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59755132 - NM_032043 BRIP1 0 . . . 2.64 64.87 30 5.57 Yes 59 1.18 Yes 0 0 No -29 0.85 Yes 47 90.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68817113 + NM_133509 RAD51B 0 . . . 0.35 73.16 37 5.65 Yes 14 1.01 Yes 0 0 No -36 0.29 No 44 81.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47713328 + NM_000251 MSH2 0 . . . 0.18 55.82 41 6.09 Yes 1 0.1 No 0 0 No -29 0.31 No 57 55.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68656858 + NM_133509 RAD51B 0 . . . 5.37 74.47 19 5.7 Yes 29 0.64 No 0 0 No -33 0.63 No 37 63.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68774205 + NM_004360 CDH1 0 . . . 1.35 65.36 25 6.12 Yes 27 1.14 Yes 0 0 No -28 0.79 Yes 31 71.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215631561 - NM_000465 BARD1 0 . . . 0.09 50.13 27 4.75 No 38 0.01 No 0 0 No -26 0.86 Yes 39 36.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59916575 - NM_032043 BRIP1 0 . . . 4.63 71.62 22 5.19 No 47 0.41 No 0 0 No -22 0.6 No 46 62.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56790458 + NM_058216 RAD51C 0 . . . 0.09 76.63 28 5.37 No 67 -5.14 No 0 0 No -27 0.81 Yes 48 81.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68373957 + NM_133509 RAD51B 0 . . . 5.75 82.58 16 5.29 No 9 1.03 Yes 0 0 No -21 0.47 No 49 76.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32927056 + NM_000059 BRCA2 0 . . . 4 82.07 33 5.09 No 54 -2.99 No 0 0 No -21 0.74 Yes 45 58.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68891233 + NM_133509 RAD51B 0 . . . 3.79 77.38 24 4.8 No 1 1.08 Yes 0 0 No -23 0.84 Yes 36 69.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68780636 + NM_133509 RAD51B 0 . . . 5.54 72.94 31 7.06 Yes 66 0.67 No 0 0 No -30 0.78 Yes 33 78.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37055085 + NM_000249 MLH1 0 . . . 2.32 70.64 27 5 No 26 0.59 No 0 0 No -21 0.84 Yes 28 93.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215613079 - NM_000465 BARD1 0 . . . 2.86 73.77 28 5.91 Yes 60 0.99 Yes 0 0 No -27 0.85 Yes 37 82.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68970841 + NM_133509 RAD51B 0 . . . 2.43 76.89 130 12.55 Yes 30 0.91 Yes 0 0 No -25 0.88 Yes 28 75.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68748595 + NM_133509 RAD51B 0 . . . 0.12 0 19 6.95 Yes 53 1.76 Yes 0 0 No -40 0.68 Yes 43 88.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152347498 - NM_005431 XRCC2 0 . . . 7.78 72.75 12 5.57 Yes 73 -3.16 No 0 0 No -26 0.66 No 48 58.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32966247 + NM_000059 BRCA2 0 . . . 2.67 78.12 19 5.9 Yes 4 0.25 No 0 0 No -18 0.4 No 43 69.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68479259 + NM_133509 RAD51B 0 . . . 1.27 67.65 17 6.93 Yes 45 0.88 Yes 0 0 No -25 0.46 No 42 33.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215638582 - NM_000465 BARD1 0 . . . 2.18 68.88 32 8.22 Yes 76 -2.9 No 0 0 No -31 0.45 No 45 48.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69094864 + NM_133509 RAD51B 0 . . . 1.24 63.26 16 4.69 No 0 -1.33 No 0 0 No -21 0.48 No 35 67.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131970917 + NM_005732 RAD50 0 . . . 0.66 62.91 21 4.9 No 24 1.18 Yes 0 0 No -23 0.87 Yes 49 46.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59826011 - NM_032043 BRIP1 0 . . . 6.8 88.32 20 5.1 No 71 0.11 No 0 0 No -23 0.65 No 46 78.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90996398 - NM_002485 NBN 0 . . . 1.74 72.61 18 5.47 No 67 -3.57 No 0 0 No -17 0.66 No 52 40.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32898062 + NM_000059 BRCA2 0 . . . 2.64 73.43 17 5.27 No 75 -5.6 No 0 0 No -22 0.61 No 46 55.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37034088 + NM_000249 MLH1 0 . . . 0.02 0 17 5.66 Yes 23 0.02 No 0 0 No -16 0.69 Yes 18 25.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59880353 - NM_032043 BRIP1 0 . . . 2.64 70.64 34 5.33 No 40 -3.4 No 0 0 No -26 0.74 Yes 43 71.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32971910 + NM_000059 BRCA2 0 . . . 3 67.22 25 5.39 No 58 1.01 Yes 0 0 No -24 0.84 Yes 50 26.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69069140 + NM_133509 RAD51B 0 . . . 7.16 90.11 33 5.16 No 61 2.1 Yes 0 0 No -32 0.79 Yes 20 60.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131948913 + NM_005732 RAD50 0 . . . 1.92 66.84 20 6.19 Yes 17 1.52 Yes 0 0 No -31 0.48 No 41 91.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32911879 + NM_000059 BRCA2 0 . . . 1.69 76.16 17 4.97 No 22 -3.53 No 0 0 No -22 0.82 Yes 53 69.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68985643 + NM_133509 RAD51B 0 . . . 2.98 69.02 38 6.05 Yes 30 -3.93 No 0 0 No -25 0.39 No 52 58.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68534246 + NM_133509 RAD51B 0 . . . 5.87 84 47 7.85 Yes -4 -1.91 No 0 0 No -46 0.58 No 52 51.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68586841 + NM_133509 RAD51B 0 . . . 0.89 81.23 11 5.39 No 35 1.07 Yes 0 0 No -22 0.67 Yes 34 63.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59766076 - NM_032043 BRIP1 0 . . . 9.06 93.44 59 7.84 Yes 53 0.41 No 0 0 No -26 0.61 No 52 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69041108 + NM_133509 RAD51B 0 . . . 3.69 68.21 46 8.11 Yes 58 0.5 No 0 0 No -39 0.35 No 49 78.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6043062 - NM_000535 PMS2 0 . . . 3.74 63.26 13 5.57 Yes 14 1.04 Yes 0 0 No -24 0.43 No 50 35.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108093280 + NM_000051 ATM 0 . . . 0.68 66.91 22 4.53 No 68 1.85 Yes 0 0 No -18 0.46 No 44 60.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215615803 - NM_000465 BARD1 0 . . . 0.76 65.43 35 7.94 Yes NA NA NA 0 0 No -23 0.58 No 48 11.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131913713 + NM_005732 RAD50 0 . . . 2.1 72.33 24 5.48 No 29 1.15 Yes 0 0 No -23 0.66 No 29 32.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68345684 + NM_133509 RAD51B 0 . . . 1.84 86.09 18 4.29 No 13 1.53 Yes 0 0 No -20 0.61 No 45 70.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190697076 + NM_000534 PMS1 0 . . . 2.49 67.95 17 6.81 Yes 57 0.14 No 0 0 No -26 0.33 No 41 50.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152369099 - NM_005431 XRCC2 0 . . . 3.89 84 11 3.35 No 2 1.5 Yes 0 0 No -27 0.37 No 21 42.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59925965 - NM_032043 BRIP1 0 . . . 3.63 72.54 16 4.58 No 19 0.28 No 0 0 No -32 0.79 Yes 39 51.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68937577 + NM_133509 RAD51B 0 . . . 6.94 80.25 13 4.36 No 45 1.46 Yes 0 0 No -48 0.89 Yes 44 91.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29086371 - NM_001005735 CHEK2 0 . . . 3.68 70.85 15 4.92 No 37 0.93 Yes 0 0 No -27 0.6 No 45 39.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59823625 - NM_032043 BRIP1 0 . . . 0.53 79.12 17 5.57 Yes 36 1.62 Yes 0 0 No -16 0.77 Yes 27 87.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7563786 - NM_000546 TP53 0 . . . 6.39 87.34 18 3.99 No 62 0.73 No 0 0 No -24 0.46 No 44 65.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68360608 + NM_133509 RAD51B 0 . . . 10.85 89.29 43 6.95 Yes 26 1.38 Yes 0 0 No -33 0.45 No 32 49.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37056588 + NM_000249 MLH1 0 . . . 6.19 72.14 71 6.64 Yes 25 0.53 No 0 0 No -24 0.44 No 43 85.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68691091 + NM_133509 RAD51B 0 . . . 3.11 61.7 16 3.93 No 13 0.62 No 0 0 No -21 0.41 No 49 87.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190714563 + NM_000534 PMS1 0 . . . 0.78 69.32 23 4.79 No 44 1.05 Yes 0 0 No -22 0.7 Yes 33 85.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84405028 - NM_139076 FAM175A 0 . . . 3.82 65 17 4.58 No 72 -3.84 No 0 0 No -27 0.51 No 39 62.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89686169 + NM_000314 PTEN 0 . . . 8.01 88.11 40 6.78 Yes -1 1.31 Yes 0 0 No -39 0.88 Yes 44 78.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68379130 + NM_133509 RAD51B 0 . . . 8.01 73.79 21 4.87 No 1 1.61 Yes 0 0 No -20 0.84 Yes 40 62.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68587833 + NM_133509 RAD51B 0 . . . 1.25 62.85 19 5.91 Yes 21 0.33 No 0 0 No -30 0.65 No 42 85.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47669173 + NM_000251 MSH2 0 . . . 1.42 65.25 17 4.66 No 74 1.58 Yes 0 0 No -22 0.37 No 34 63.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47802341 + NM_000251 MSH2 0 . . . 0.65 76.63 31 5.31 No 58 -3.85 No 0 0 No -55 0.59 No 43 29.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59788117 - NM_032043 BRIP1 0 . . . 3.84 84.79 19 4.69 No 62 1.47 Yes 0 0 No -18 0.36 No 47 82.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190693218 + NM_000534 PMS1 0 . . . 5.64 75.59 17 4.58 No 44 0.44 No 0 0 No -16 0.7 Yes 39 36.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75485228 - NM_001040108 MLH3 0 . . . 2.33 77.27 36 6.93 Yes 29 0.96 Yes 0 0 No -22 0.89 Yes 19 39.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68667753 + NM_133509 RAD51B 0 . . . 2.52 73.63 25 5.39 No 11 0.74 No 0 0 No -25 0.56 No 47 60.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68612731 + NM_133509 RAD51B 0 . . . 0.59 0 29 5.48 No 53 -3.24 No 0 0 No -23 0.44 No 36 54.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68917942 + NM_133509 RAD51B 0 . . . 2.33 69.65 15 5.36 No 31 -4.47 No 0 0 No -30 0.53 No 46 52.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68781619 + NM_133509 RAD51B 0 . . . 1.33 66.35 16 4.7 No 62 0.56 No 0 0 No -20 0.85 Yes 46 37.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68399161 + NM_133509 RAD51B 0 . . . 1.15 68.92 29 5.91 Yes 75 -4.13 No 0 0 No -28 0.79 Yes 36 70.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89672744 + NM_000314 PTEN 0 . . . 6.42 84.43 28 5.03 No 7 0.6 No 0 0 No -27 0.75 Yes 51 55.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215673106 - NM_000465 BARD1 0 . . . 3.61 84.17 21 6.31 Yes 44 1.39 Yes 0 0 No -24 0.85 Yes 14 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41016824 + NM_001164269 RAD51 0 . . . 4.31 0 23 3.79 No 25 0.96 Yes 0 0 No -27 0.39 No 45 59.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6034009 - NM_000535 PMS2 0 . . . 2.71 83.24 21 4.8 No 75 -2.76 No 0 0 No -20 0.61 No 32 77.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47792010 + NM_000251 MSH2 0 . . . 2.03 52.02 16 3.85 No 15 0.16 No 0 0 No -21 0.36 No 43 73.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68317442 + NM_133509 RAD51B 0 . . . 4.93 68.4 25 5.57 Yes 26 0.82 Yes 0 0 No -24 0.65 No 32 43.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69115312 + NM_133509 RAD51B 0 . . . 3.93 77.69 23 4.88 No 60 0.26 No 0 0 No -19 0.48 No 50 71.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37073705 + NM_000249 MLH1 0 . . . 3.11 69.11 14 5.1 No 15 0.39 No 0 0 No -22 0.4 No 43 93.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68373095 + NM_133509 RAD51B 0 . . . 3.97 69.56 21 3.39 No 20 1.31 Yes 0 0 No -23 0.67 Yes 38 81.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68400168 + NM_133509 RAD51B 0 . . . 0.54 70.66 24 6.16 Yes -2 0.46 No 0 0 No -23 0.57 No 44 65.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131971357 + NM_005732 RAD50 0 . . . 4.39 73.87 21 4.69 No 61 -2.27 No 0 0 No -20 0.93 Yes 51 84.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68308512 + NM_133509 RAD51B 0 . . . 7.86 86.48 29 6.95 Yes 13 0.59 No 0 0 No -34 0.57 No 45 61.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32923325 + NM_000059 BRCA2 0 . . . 0.48 76.63 21 6.32 Yes 75 -4.7 No 0 0 No -20 0.56 No 47 46.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215656461 - NM_000465 BARD1 0 . . . 0.65 0 19 4.36 No 13 0.56 No 0 0 No -18 0.93 Yes 45 93.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47759254 + NM_000251 MSH2 0 . . . 1.27 61.35 34 6.12 Yes 16 0.12 No 0 0 No -34 0.57 No 34 55.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68698184 + NM_133509 RAD51B 0 . . . 5.23 65.85 27 6.78 Yes 2 1.44 Yes 0 0 No -26 0.93 Yes 28 85.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75485949 - NM_001040108 MLH3 0 . . . 3.6 85.02 31 5.92 Yes 4 1.2 Yes 0 0 No -30 0.94 Yes 43 52.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104183036 - NM_001100119 XRCC3 0 . . . 6.25 83.99 31 6.88 Yes 21 0.2 No 0 0 No -30 0.75 Yes 37 70.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32947339 + NM_000059 BRCA2 0 . . . 0.42 74.73 18 5.39 No 33 1.02 Yes 0 0 No -23 0.6 No 25 59.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47782879 + NM_000251 MSH2 0 . . . 7.79 96.71 19 4.43 No 59 0.93 Yes 0 0 No -18 0.71 Yes 46 57.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41007610 + NM_001164269 RAD51 0 . . . 3.66 79.4 13 4.36 No 58 0.08 No 0 0 No -47 0.79 Yes 45 33.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94222955 - NM_005591 MRE11 0 . . . 0.09 69.81 21 5.66 Yes 47 0.51 No 0 0 No -20 0.76 Yes 11 58.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68647677 + NM_133509 RAD51B 0 . . . 2.86 81.01 20 6.32 Yes 53 0.46 No 0 0 No -19 0.47 No 49 47.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52445786 - NM_004656 BAP1 0 . . . 4.7 77.19 32 5.74 Yes 3 0.65 No 0 0 No -32 0.7 Yes 43 64.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37072042 + NM_000249 MLH1 0 . . . 1.61 76.12 25 5.1 No 73 -4.21 No 0 0 No -42 0.32 No 60 38.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47724195 + NM_000251 MSH2 0 . . . 6.6 81.78 29 6.3 Yes 22 0.75 No 0 0 No -28 0.78 Yes 36 95.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59819049 - NM_032043 BRIP1 0 . . . 2.51 80.75 21 5.66 Yes 24 0.69 No 0 0 No -20 0.65 No 51 60 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108173015 + NM_000051 ATM 0 . . . 7.23 78.41 36 7.38 Yes 32 0.26 No 0 0 No -46 0.38 No 47 53.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642127 - NM_000465 BARD1 0 . . . 3.31 75.75 26 6.03 Yes 67 -3.49 No 0 0 No -25 0.66 Yes 44 77.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215631943 - NM_000465 BARD1 0 . . . 1.75 69.14 28 5.6 Yes 76 0.3 No 0 0 No -28 0.44 No 49 60.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59785515 - NM_032043 BRIP1 0 . . . 8.74 80.24 31 6.44 Yes 71 0.22 No 0 0 No -30 0.47 No 54 38.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68842388 + NM_004360 CDH1 0 . . . 5.53 83.24 20 5.57 Yes 17 1.6 Yes 27 0.28 Yes -19 0.74 Yes 41 98.35 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 108109944 + NM_000051 ATM 0 . . . 5.67 71.13 60 9.54 Yes 14 1.65 Yes 0 0 No -59 0.59 No 44 94.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108155583 + NM_000051 ATM 0 . . . 4.36 77.61 27 5.74 Yes 27 1.16 Yes 0 0 No -26 0.41 No 48 95.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69022337 + NM_133509 RAD51B 0 . . . 5.23 79.93 19 4.68 No -4 0.86 Yes 0 0 No -28 0.48 No 43 50.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32938530 + NM_000059 BRCA2 0 . . . 6.49 75.69 49 7.79 Yes 0 0.94 Yes 0 0 No -29 0.81 Yes 48 82.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47651478 + NM_000251 MSH2 0 . . . 3.53 85.87 27 4.08 No 41 1.04 Yes 0 0 No -26 0.9 Yes 51 75.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108142979 + NM_000051 ATM 0 . . . 0.67 80.12 13 3.93 No 52 -2.99 No 0 0 No -20 0.73 Yes 47 64.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108202874 + NM_000051 ATM 0 . . . 1.44 63.29 98 9.38 Yes 61 0.69 No 0 0 No -34 0.42 No 45 49.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90962988 - NM_002485 NBN 0 . . . 0.47 0 29 4.06 No 64 -4.81 No 0 0 No -28 0.41 No 51 56.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190675820 + NM_000534 PMS1 0 . . . 1.39 58.79 35 6.08 Yes 72 -6.9 No 0 0 No -34 0.88 Yes 48 61.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68528700 + NM_133509 RAD51B 0 . . . 7.78 76.3 38 6.39 Yes 22 0.52 No 0 0 No -37 0.65 No 42 73.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59785648 - NM_032043 BRIP1 0 . . . 2.24 70.72 13 4.98 No 24 0.02 No 0 0 No -23 0.79 Yes 45 85.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68954043 + NM_133509 RAD51B 0 . . . 2.57 76.48 22 4.96 No 5 0.97 Yes 0 0 No -21 0.52 No 45 82.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190654769 + NM_000534 PMS1 0 . . . 0.94 74.43 24 4.99 No 46 -3.61 No 0 0 No -23 0.7 Yes 34 62.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47770277 + NM_000251 MSH2 0 . . . 5.65 79.85 25 5.17 No 2 0.32 No 0 0 No -24 0.79 Yes 42 36.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190703484 + NM_000534 PMS1 0 . . . 0.83 72.44 29 5.48 No 68 -4.53 No 0 0 No -28 0.71 Yes 38 41.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68518155 + NM_133509 RAD51B 0 . . . 3.63 71.91 14 5.16 No 72 0.82 Yes 0 0 No -23 0.52 No 35 66.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32920575 + NM_000059 BRCA2 0 . . . 5.58 67.58 28 6.47 Yes 68 1.01 Yes 0 0 No -27 0.88 Yes 44 59.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68823442 + NM_004360 CDH1 0 . . . 9.51 92.46 26 6.08 Yes 12 1.35 Yes 0 0 No -25 0.83 Yes 46 96.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68752336 + NM_133509 RAD51B 0 . . . 3.99 74.29 28 5.38 No 13 0.23 No 0 0 No -27 0.7 Yes 45 77.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68295578 + NM_133509 RAD51B 0 . . . 8.25 86.48 20 5.08 No 31 0.99 Yes 0 0 No -50 0.61 No 41 89.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59901783 - NM_032043 BRIP1 0 . . . 7.94 84.38 30 4.67 No 20 -1.03 No 0 0 No -27 0.5 No 49 50.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89661638 + NM_000314 PTEN 0 . . . 2.56 66.5 36 5.9 Yes 52 0.63 No 0 0 No -25 0.55 No 36 50.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59796286 - NM_032043 BRIP1 0 . . . 1.13 67.91 34 6.97 Yes 70 0.73 No 0 0 No -33 0.51 No 50 39.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68757237 + NM_133509 RAD51B 0 . . . 1.42 59.17 21 5.2 No 51 -1.87 No 0 0 No -50 0.7 Yes 22 65.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079476 + NM_000249 MLH1 0 . . . 4.91 73.43 34 5.74 Yes 15 -2.98 No 0 0 No -28 0.67 Yes 49 49.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68914400 + NM_133509 RAD51B 0 . . . 0.29 68.24 40 7.35 Yes 63 0.43 No 0 0 No -39 0.93 Yes 61 33.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190728215 + NM_000534 PMS1 0 . . . 4.82 79.55 33 5.86 Yes 58 1.76 Yes 0 0 No -32 0.72 Yes 55 47.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190653842 + NM_000534 PMS1 0 . . . 0.98 60.9 19 4.27 No 39 0.66 No 0 0 No -26 0.63 No 49 32.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59885707 - NM_032043 BRIP1 0 . . . 0.64 60.21 50 7.81 Yes -4 0.48 No 0 0 No -49 0.89 Yes 36 58.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90949648 - NM_002485 NBN 0 . . . 3.39 77.71 21 5.02 No 4 0.57 No 0 0 No -20 0.47 No 43 63.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69112211 + NM_133509 RAD51B 0 . . . 2.88 80.03 20 5.69 Yes 54 -3.56 No 0 0 No -26 0.76 Yes 40 73.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215658124 - NM_000465 BARD1 0 . . . 4.81 75.59 60 7.57 Yes 4 1.22 Yes 0 0 No -17 0.31 No 45 93.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40989512 + NM_001164269 RAD51 0 . . . 2.43 80.34 16 4.04 No 36 1.11 Yes 0 0 No -51 0.85 Yes 22 69.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68628475 + NM_133509 RAD51B 0 . . . 2.35 64.85 14 5.74 Yes 36 0.44 No 0 0 No -22 0.54 No 39 59.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68809000 + NM_004360 CDH1 0 . . . 1.72 80.22 37 5.29 No 67 -4.91 No 0 0 No -27 0.39 No 47 57.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32925473 + NM_000059 BRCA2 0 . . . 2.42 67 40 5.32 No -3 0.76 No 0 0 No -23 0.78 Yes 61 32.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190655174 + NM_000534 PMS1 0 . . . 5.28 84.24 39 5.33 No 60 0.16 No 0 0 No -24 0.55 No 48 58.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47660906 + NM_000251 MSH2 0 . . . 6.49 85.17 33 7.19 Yes 49 2.29 Yes 0 0 No -32 0.64 No 50 46.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59876969 - NM_032043 BRIP1 0 . . . 1.1 64.04 23 5.29 No 70 0.69 No 0 0 No -22 0.72 Yes 30 35.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108211710 + NM_000051 ATM 0 . . . 4.73 75.79 27 5.17 No 22 0.35 No 0 0 No -20 0.47 No 46 68.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59768584 - NM_032043 BRIP1 0 . . . 4.47 75.24 22 3.76 No 55 1.11 Yes 0 0 No -21 0.93 Yes 42 59.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68975854 + NM_133509 RAD51B 0 . . . 0.45 61.3 20 5.02 No 44 -3.72 No 0 0 No -19 0.6 No 46 92.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89682730 + NM_000314 PTEN 0 . . . 7.76 79.05 20 7.14 Yes 49 1.68 Yes 0 0 No -19 0.73 Yes 38 68.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56791140 + NM_058216 RAD51C 0 . . . 4.35 82.73 34 5.82 Yes 58 -3.88 No 0 0 No -33 0.5 No 53 55.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33430421 - NM_002878 RAD51D 0 . . . 6.4 80.19 15 5.39 No 2 1.47 Yes 0 0 No -26 0.38 No 46 64.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190651839 + NM_000534 PMS1 0 . . . 4.19 77.75 22 6.18 Yes 53 0.68 No 0 0 No -21 0.55 No 44 81.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75500285 - NM_001040108 MLH3 0 . . . 5.81 72.7 24 4.84 No 58 0.52 No 0 0 No -23 0.38 No 42 68.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68574608 + NM_133509 RAD51B 0 . . . 1.59 67.96 45 6.19 Yes -2 0.62 No 0 0 No -33 0.3 No 45 43.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32895413 + NM_000059 BRCA2 0 . . . 2.57 71.84 34 7.46 Yes 19 0.85 Yes 0 0 No -28 0.79 Yes 32 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23638358 - NM_024675 PALB2 0 . . . 2.35 77.22 15 4.24 No 47 0.35 No 0 0 No -29 0.62 No 48 87.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215638185 - NM_000465 BARD1 0 . . . 5.83 85.86 30 6 Yes 74 1.14 Yes 0 0 No -29 0.23 No 47 54.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94189847 - NM_005591 MRE11 0 . . . 0.23 63.72 29 5.26 No 56 -4.25 No 0 0 No -25 0.57 No 44 91.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190657371 + NM_000534 PMS1 0 . . . 8.44 89.93 10 4 No 7 1.61 Yes 0 0 No -29 0.65 No 51 85.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68587927 + NM_133509 RAD51B 0 . . . 2.4 86.79 29 5.74 Yes 29 0.46 No 0 0 No -36 0.39 No 47 95.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190667489 + NM_000534 PMS1 0 . . . 1.87 68.06 12 5.05 No 63 1.21 Yes 0 0 No -31 0.51 No 43 86.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68651172 + NM_133509 RAD51B 0 . . . 2.3 79.24 18 5.74 Yes 42 1.55 Yes 0 0 No -28 0.64 No 16 94.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52435581 - NM_004656 BAP1 0 . . . 2.55 0 22 5 No 12 0.87 Yes 0 0 No -24 0.72 Yes 46 72.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68736761 + NM_133509 RAD51B 0 . . . 2.49 74.28 20 5.4 No 21 -2.4 No 0 0 No -29 0.54 No 49 34.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68541096 + NM_133509 RAD51B 0 . . . 4.42 86.32 22 7.21 Yes 68 1.14 Yes 0 0 No -21 0.97 Yes 46 78.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68733975 + NM_133509 RAD51B 0 . . . 3.45 76.1 15 5.66 Yes 2 0 No 0 0 No -25 0.29 No 44 40.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68907833 + NM_133509 RAD51B 0 . . . 0.75 0 21 5 No 19 0.65 No 0 0 No -20 0.92 Yes 39 79.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68828006 + NM_004360 CDH1 0 . . . 1 75.62 18 4.79 No 27 1.47 Yes 0 0 No -21 0.6 No 49 84.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89729218 + NM_000314 PTEN 0 . . . 1.71 69.37 12 4.55 No 1 0.41 No 0 0 No -24 0.72 Yes 41 72.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59858081 - NM_032043 BRIP1 0 . . . 2.33 0 25 5.29 No 40 1.34 Yes 0 0 No -25 0.71 Yes 30 51.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68939567 + NM_133509 RAD51B 0 . . . 3.01 75.92 29 5.29 No 65 -0.52 No 0 0 No -21 0.36 No 52 68.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015263 + NM_000179 MSH6 0 . . . 3.51 88.6 13 4.36 No 15 0.63 No 0 0 No -26 0.77 Yes 21 79.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68802059 + NM_004360 CDH1 0 . . . 2.01 77.87 30 5.71 Yes 32 0.98 Yes 0 0 No -29 0.74 Yes 21 34.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59856726 - NM_032043 BRIP1 0 . . . 3.05 84.16 27 4.73 No 37 -1.74 No 0 0 No -33 0.74 Yes 49 40.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68517911 + NM_133509 RAD51B 0 . . . 2.41 67.69 28 5.56 Yes 31 1.02 Yes 0 0 No -27 0.89 Yes 51 45.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68922013 + NM_133509 RAD51B 0 . . . 1.31 70.7 23 6.27 Yes 70 -2.78 No 0 0 No -22 0.85 Yes 40 72.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68303621 + NM_133509 RAD51B 0 . . . 2.84 76.63 15 4.47 No 40 0.51 No 0 0 No -21 0.91 Yes 23 60.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89627205 + NM_000314 PTEN 0 . . . 4.21 73.98 31 4.26 No 52 0.4 No 0 0 No -22 0.42 No 44 74.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47746539 + NM_000251 MSH2 0 . . . 2.99 72.62 31 3.82 No 6 0.38 No 0 0 No -23 0.59 No 52 41.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41216382 - NM_007294 BRCA1 0 . . . 2.62 0 64 7.44 Yes 3 0.12 No 0 0 No -24 0.13 No 46 47.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144920 + NM_133509 RAD51B 0 . . . 1.77 74.77 26 6.06 Yes 8 1.59 Yes 0 0 No -25 0.91 Yes 43 39.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90972686 - NM_002485 NBN 0 . . . 1.83 77.79 38 6.82 Yes 34 0.9 Yes 0 0 No -38 0.67 Yes 24 77.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89642933 + NM_000314 PTEN 0 . . . 0.91 0 41 7.38 Yes 71 -2.79 No 0 0 No -28 0.48 No 43 26.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69109203 + NM_133509 RAD51B 0 . . . 3.54 67.31 17 6.93 Yes 24 1.29 Yes 0 0 No -29 0.47 No 34 89.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75486838 - NM_001040108 MLH3 0 . . . 2.2 70.34 16 5.18 No 72 0.59 No 0 0 No -20 0.59 No 22 75.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89628127 + NM_000314 PTEN 0 . . . 2.13 69.34 21 7.21 Yes 35 0.23 No 0 0 No -20 0.86 Yes 23 49.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68812832 + NM_004360 CDH1 0 . . . 7.62 82.95 17 5.82 Yes 70 0.2 No 0 0 No -30 0.51 No 63 40.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37033823 + NM_000249 MLH1 0 . . . 1.94 67.37 27 5.41 No 46 0.88 Yes 0 0 No -29 0.49 No 53 55.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68941905 + NM_133509 RAD51B 0 . . . 1.84 64.54 21 4.9 No 52 0.62 No 0 0 No -20 0.85 Yes 18 56.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21985432 - NM_000077 CDKN2A 0 . . . 2.32 69.11 19 5.57 Yes 56 0.58 No 0 0 No -24 0.76 Yes 32 63.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68837695 + NM_004360 CDH1 0 . . . 0.69 65.86 15 5.74 Yes 35 0.7 No 0 0 No -31 0.69 Yes 23 76.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68779130 + NM_133509 RAD51B 0 . . . 4.67 83.81 26 4.02 No 46 -3.49 No 0 0 No -26 0.49 No 52 61.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89686684 + NM_000314 PTEN 0 . . . 4.95 77.06 57 7.9 Yes 52 -4.46 No 0 0 No -56 0.74 Yes 49 93.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68662358 + NM_133509 RAD51B 0 . . . 0.54 55.78 16 4.58 No 58 0.69 No 0 0 No -24 0.72 Yes 32 55.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68893407 + NM_133509 RAD51B 0 . . . 3.94 73.13 17 5.33 No 16 0.42 No 0 0 No -23 0.44 No 52 68.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47782943 + NM_000251 MSH2 0 . . . 3.98 75.26 35 4.55 No 14 0.52 No 0 0 No -23 0.75 Yes 44 76.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29089193 - NM_001005735 CHEK2 0 . . . 4.49 67.46 33 6.17 Yes -4 0.87 Yes 0 0 No -30 0.29 No 40 69.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152346806 - NM_005431 XRCC2 0 . . . 7.45 85.69 24 5.48 No 72 1.88 Yes 0 0 No -23 0.94 Yes 46 41.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32934681 + NM_000059 BRCA2 0 . . . 4.01 80.12 26 6.01 Yes 7 1.14 Yes 0 0 No -25 0.86 Yes 51 81.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21991681 - NM_000077 CDKN2A 0 . . . 6.48 77.39 16 4.48 No 53 -3.88 No 0 0 No -28 0.31 No 46 49.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69060054 + NM_133509 RAD51B 0 . . . 0.65 76.84 18 5.46 No 54 1.05 Yes 0 0 No -29 0.67 Yes 46 52.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40986743 + NM_001164269 RAD51 0 . . . 0.7 74.23 23 5.99 Yes 57 0.68 No 0 0 No -20 0.57 No 42 83.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68691430 + NM_133509 RAD51B 0 . . . 1.24 83.95 14 5.29 No 64 1.2 Yes 0 0 No -21 0.36 No 45 75.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68543540 + NM_133509 RAD51B 0 . . . 3.06 77.67 40 5.13 No 1 0.65 No 0 0 No -32 0.54 No 44 52.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68669080 + NM_133509 RAD51B 0 . . . 4.91 77.16 24 6.29 Yes 23 0.75 No 0 0 No -23 0.5 No 35 53.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33442198 - NM_002878 RAD51D 0 . . . 4.56 77.61 19 6.04 Yes 1 0.6 No 0 0 No -24 0.68 Yes 44 52.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41022973 + NM_001164269 RAD51 0 . . . 0.98 76.08 20 5.1 No 76 1.23 Yes 0 0 No -19 0.82 Yes 47 82.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131898313 + NM_005732 RAD50 0 . . . 1.39 57.83 22 7.21 Yes 50 -4.94 No 0 0 No -21 0.83 Yes 56 41.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59807289 - NM_032043 BRIP1 0 . . . 7.24 87.27 22 5.81 Yes 23 0.94 Yes 0 0 No -21 0.82 Yes 48 63.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90962809 - NM_002485 NBN 0 . . . 6.36 80.05 38 6.14 Yes 69 0.89 Yes 0 0 No -23 0.76 Yes 48 79.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68552958 + NM_133509 RAD51B 0 . . . 1.57 66.19 31 5.83 Yes NA NA NA 0 0 No -30 0.69 Yes 56 46.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94181107 - NM_005591 MRE11 0 . . . 6.78 86.02 21 4.52 No -3 0.64 No 0 0 No -26 0.58 No 51 47.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402013 + NM_133509 RAD51B 0 . . . 1.71 69.5 21 4.68 No 47 -1.84 No 0 0 No -20 0.79 Yes 49 59.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68790815 + NM_133509 RAD51B 0 . . . 0.27 0 15 5.39 No 56 0.38 No 0 0 No -28 0.21 No 50 24.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68511924 + NM_133509 RAD51B 0 . . . 2.11 80.22 44 7.52 Yes 58 -3.87 No 0 0 No -43 0.47 No 43 63.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104168254 - NM_001100119 XRCC3 0 . . . 6.17 77.88 25 6.53 Yes 75 0.92 Yes 0 0 No -24 0.79 Yes 50 76.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68780541 + NM_133509 RAD51B 0 . . . 0.09 80.49 55 6.34 Yes 13 0.04 No 0 0 No -28 0.52 No 45 43.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68659103 + NM_133509 RAD51B 0 . . . 1.45 67.9 26 5.12 No 62 0.09 No 0 0 No -20 0.41 No 53 37.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131892100 + NM_005732 RAD50 0 . . . 0.74 0 50 8.41 Yes 43 1.26 Yes 0 0 No -27 0.85 Yes 43 29.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215589235 - NM_000465 BARD1 0 . . . 3.7 78.82 25 4.73 No 45 1.01 Yes 0 0 No -24 0.45 No 45 56.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108238469 + NM_000051 ATM 0 . . . 4.35 70.18 18 4.9 No 18 1.8 Yes 0 0 No -29 0.33 No 21 79.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68799192 + NM_004360 CDH1 0 . . . 3.37 68.95 34 5.98 Yes 16 1.11 Yes 0 0 No -23 0.53 No 42 91.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59914214 - NM_032043 BRIP1 0 . . . 2.62 84.87 16 4.69 No 45 1.47 Yes 0 0 No -54 0.5 No 13 19.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68619711 + NM_133509 RAD51B 0 . . . 8.52 92.4 33 6.15 Yes 54 0.15 No 0 0 No -32 0.5 No 46 66.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68445708 + NM_133509 RAD51B 0 . . . 8.74 76.49 18 4.9 No 68 -1.94 No 0 0 No -17 0.58 No 38 47.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402200 + NM_133509 RAD51B 0 . . . 3.59 87 32 5.91 Yes 33 0.99 Yes 0 0 No -31 0.77 Yes 25 69.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29085723 - NM_001005735 CHEK2 0 . . . 9.05 78.83 26 5.18 No 52 1.92 Yes 0 0 No -25 0.69 Yes 49 56.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90952219 - NM_002485 NBN 0 . . . 3.38 71.88 29 6.69 Yes 52 1.53 Yes 0 0 No -28 0.87 Yes 50 74.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47687096 + NM_000251 MSH2 0 . . . 5.08 79.18 44 9.36 Yes 71 3.02 Yes 0 0 No -43 0.6 No 53 47.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75480448 - NM_001040108 MLH3 0 . . . 8.03 86.6 17 4 No 34 1.29 Yes 0 0 No -53 0.68 Yes 16 51.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29100078 - NM_001005735 CHEK2 0 . . . 4.36 59.95 9 3.07 No 70 -0.06 No 0 0 No -37 0.89 Yes 30 30.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673757 + NM_000534 PMS1 0 . . . 0.22 65.22 21 4.72 No 61 0.46 No 0 0 No -20 0.89 Yes 47 79.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29122733 - NM_001005735 CHEK2 0 . . . 0.18 66.37 31 6.27 Yes 14 -2.46 No 0 0 No -22 0.42 No 50 60.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68832249 + NM_004360 CDH1 0 . . . 4.67 76.56 26 4.75 No 43 1.51 Yes 0 0 No -25 0.77 Yes 28 86.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68452163 + NM_133509 RAD51B 0 . . . 2.62 64.26 15 4.31 No 76 -5.75 No 0 0 No -24 0.76 Yes 39 78.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59773142 - NM_032043 BRIP1 0 . . . 4.55 83.39 23 5.15 No 5 1.26 Yes 0 0 No -18 0.54 No 42 73.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68684967 + NM_133509 RAD51B 0 . . . 5.01 72.7 17 4.65 No 66 1.01 Yes 0 0 No -23 0.36 No 43 75.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69085869 + NM_133509 RAD51B 0 . . . 7.38 80.61 10 4.82 No 33 0.84 Yes 0 0 No -24 0.39 No 49 83.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68305755 + NM_133509 RAD51B 0 . . . 0.07 65.19 17 4.58 No 20 0.56 No 0 0 No -39 0.42 No 38 65.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152365187 - NM_005431 XRCC2 0 . . . 0.39 65.93 22 4.46 No 63 0.1 No 0 0 No -21 0.42 No 56 41.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75501573 - NM_001040108 MLH3 0 . . . 0.2 68.55 27 5.1 No 33 1.38 Yes 0 0 No -27 0.8 Yes 25 48.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94189925 - NM_005591 MRE11 0 . . . 3.27 76.69 36 5.56 Yes 65 -3.34 No 0 0 No -25 0.61 No 29 53.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108145523 + NM_000051 ATM 0 . . . 4.49 68.94 24 5.46 No 19 0.89 Yes 0 0 No -26 0.75 Yes 39 91.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68461023 + NM_133509 RAD51B 0 . . . 6.48 74.29 27 6.31 Yes 12 -2.81 No 0 0 No -26 0.73 Yes 47 79.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68428330 + NM_133509 RAD51B 0 . . . 1.05 58.83 20 4.79 No 42 0.38 No 0 0 No -20 0.64 No 50 84.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152368190 - NM_005431 XRCC2 0 . . . 0.65 0 36 4.54 No 42 1.02 Yes 0 0 No -25 0.62 No 46 28.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59851478 - NM_032043 BRIP1 0 . . . 5.37 77.37 36 9.14 Yes 71 -1.87 No 0 0 No -23 0.42 No 46 47.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68679065 + NM_133509 RAD51B 0 . . . 4.65 74.27 29 5.29 No 36 0.72 No 0 0 No -21 0.54 No 40 80.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215606966 - NM_000465 BARD1 0 . . . 1.55 70.34 164 7.59 Yes 57 0.74 No 0 0 No -30 0.65 No 41 81.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47692570 + NM_000251 MSH2 0 . . . 4.06 81.17 34 5.24 No 69 -3.24 No 0 0 No -33 0.76 Yes 45 90.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68515216 + NM_133509 RAD51B 0 . . . 8.02 81.94 34 7.18 Yes 26 0 No 0 0 No -33 0.7 Yes 32 83.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37089868 + NM_000249 MLH1 0 . . . 5.55 0 28 5.39 No 10 -1.65 No 0 0 No -16 0.44 No 49 62.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59803074 - NM_032043 BRIP1 0 . . . 1.97 82.27 35 6.38 Yes 67 -6.31 No 0 0 No -34 0.72 Yes 45 55.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108237388 + NM_000051 ATM 0 . . . 9.57 87.89 32 5.74 Yes 3 0.38 No 0 0 No -31 0.27 No 49 81.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47746165 + NM_000251 MSH2 0 . . . 5.29 70.19 28 5.83 Yes 6 0.23 No 0 0 No -27 0.38 No 52 75.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84406243 - NM_139076 FAM175A 0 . . . 7.58 76.71 15 3.11 No NA NA NA 20 0.84 Yes -18 0.81 Yes 27 47.42 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 59885142 - NM_032043 BRIP1 0 . . . 3.63 56.62 22 6.71 Yes 40 0.39 No 0 0 No -27 0.47 No 44 49.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68717461 + NM_133509 RAD51B 0 . . . 2.49 71.69 19 5.53 No 19 1.04 Yes 0 0 No -28 0.68 Yes 39 43.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69086885 + NM_133509 RAD51B 0 . . . 7.67 83.12 22 5.68 Yes 37 1.26 Yes 0 0 No -21 0.86 Yes 43 78.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41210524 - NM_007294 BRCA1 0 . . . 3.87 78.53 28 4.86 No 74 -4.42 No 0 0 No -27 0.74 Yes 51 91.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89689472 + NM_000314 PTEN 0 . . . 8.04 91.42 20 5.33 No 43 0.15 No 0 0 No -23 0.54 No 49 85.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59816321 - NM_032043 BRIP1 0 . . . 3.31 65.61 39 7.68 Yes 35 -3.45 No 0 0 No -38 0.75 Yes 56 35.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47750181 + NM_000251 MSH2 0 . . . 5.81 78.76 26 5.24 No 36 -2.04 No 0 0 No -25 0.95 Yes 43 78.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152367119 - NM_005431 XRCC2 0 . . . 4.33 82.32 15 4.37 No 26 0.75 No 0 0 No -27 0.37 No 45 60.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69023059 + NM_133509 RAD51B 0 . . . 0.8 0 28 6.7 Yes 47 1.43 Yes 0 0 No -27 0.88 Yes 30 70.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41245946 - NM_007294 BRCA1 0 . . . 0.95 63.38 27 6.16 Yes 47 0.2 No 0 0 No -24 0.49 No 56 16.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94164383 - NM_005591 MRE11 0 . . . 0.99 0 17 5.57 Yes 63 1.63 Yes 0 0 No -24 0.54 No 37 88.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56797272 + NM_058216 RAD51C 0 . . . 5.5 85.02 25 7.13 Yes 72 1.19 Yes 0 0 No -31 0.64 No 53 68.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23622766 - NM_024675 PALB2 0 . . . 2.26 60.87 11 4.65 No 40 0.11 No 0 0 No -25 0.34 No 53 19.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68660114 + NM_133509 RAD51B 0 . . . 2.53 74.26 31 5.74 Yes 63 1.14 Yes 0 0 No -30 0.5 No 37 73.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68342233 + NM_133509 RAD51B 0 . . . 5.84 73.78 22 5.1 No 10 0.69 No 0 0 No -24 0.77 Yes 39 49.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47726945 + NM_000251 MSH2 0 . . . 2.09 0 24 5.2 No 26 0.7 No 0 0 No -23 0.62 No 16 68.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6048360 - NM_000535 PMS2 0 . . . 2.91 0 52 6.58 Yes 74 -5.37 No 0 0 No -32 0.79 Yes 41 78.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59757145 - NM_032043 BRIP1 0 . . . 1.24 0 12 3.83 No 15 0.75 No 0 0 No -32 0.28 No 40 42.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47778598 + NM_000251 MSH2 0 . . . 8.12 73.92 28 5.38 No 68 1.41 Yes 0 0 No -27 0.69 Yes 30 82.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94206277 - NM_005591 MRE11 0 . . . 5.67 76.69 19 7.41 Yes 6 1.15 Yes 0 0 No -26 0.66 No 48 88.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68489761 + NM_133509 RAD51B 0 . . . 7.95 91.83 24 4.9 No 49 0.88 Yes 0 0 No -23 0.92 Yes 46 69.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190701667 + NM_000534 PMS1 0 . . . 0.55 74.98 43 4.71 No 59 0.65 No 0 0 No -21 0.56 No 46 50.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68625150 + NM_133509 RAD51B 0 . . . 0.51 0 17 4.54 No 72 0.49 No 0 0 No -19 0.66 Yes 44 57.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41272017 - NM_007294 BRCA1 0 . . . 3.45 75.11 23 5.14 No 2 0.14 No 0 0 No -22 0.88 Yes 47 34.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69040920 + NM_133509 RAD51B 0 . . . 0.37 77.98 23 4.9 No -2 0.01 No 0 0 No -21 0.77 Yes 54 61.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32944965 + NM_000059 BRCA2 0 . . . 5.92 82.31 18 5.81 Yes 57 1.12 Yes 0 0 No -28 0.38 No 49 87.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215634846 - NM_000465 BARD1 0 . . . 4.82 80.53 17 5.29 No 33 1.65 Yes 0 0 No -16 0.34 No 46 48.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56777703 + NM_058216 RAD51C 0 . . . 5.6 77.08 63 8.28 Yes 67 -3.09 No 0 0 No -26 0.85 Yes 44 52.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108122027 + NM_000051 ATM 0 . . . 5.8 82.6 20 4.73 No 11 1.14 Yes 0 0 No -23 0.69 Yes 47 92.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90991910 - NM_002485 NBN 0 . . . 3.17 60.23 25 5.19 No 30 0.55 No 0 0 No -24 0.64 No 36 61.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190696919 + NM_000534 PMS1 0 . . . 6.37 80.66 49 6.65 Yes 18 0.65 No 0 0 No -24 0.57 No 40 88.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68744058 + NM_133509 RAD51B 0 . . . 0.36 69.45 38 6.08 Yes 72 1.52 Yes 0 0 No -36 0.52 No 62 26.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6028747 - NM_000535 PMS2 0 . . . 1.07 77.12 30 5.56 Yes 61 0.15 No 0 0 No -29 0.3 No 54 66.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69098310 + NM_133509 RAD51B 0 . . . 2.95 67.12 16 5.93 Yes 75 -6.54 No 0 0 No -22 0.7 Yes 36 47.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47726204 + NM_000251 MSH2 0 . . . 1.17 80.49 26 5.45 No 37 0.83 Yes 0 0 No -26 0.72 Yes 44 53.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37040796 + NM_000249 MLH1 0 . . . 5.09 64.47 24 5.2 No 47 0.39 No 0 0 No -23 0.72 Yes 48 49.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190670639 + NM_000534 PMS1 0 . . . 2.82 0 35 6.4 Yes 2 0.73 No 0 0 No -34 0.85 Yes 52 53.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105175795 + NM_021930 RINT1 0 . . . 2.03 86.71 21 5.94 Yes 76 1.48 Yes 0 0 No -20 0.76 Yes 51 41.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59812870 - NM_032043 BRIP1 0 . . . 1.23 61.78 12 3.65 No 47 0.76 No 0 0 No -45 0.59 No 48 31.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89656626 + NM_000314 PTEN 0 . . . 8.49 74.46 26 6.4 Yes 32 0.93 Yes 0 0 No -26 0.6 No 40 87.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6040521 - NM_000535 PMS2 0 . . . 1.41 84.22 64 6.62 Yes 76 1.49 Yes 0 0 No -16 0.44 No 50 65.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131963057 + NM_005732 RAD50 0 . . . 6.2 73.51 18 5.57 Yes 74 0.08 No 0 0 No -20 0.32 No 47 84.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47662476 + NM_000251 MSH2 0 . . . 3.45 85.02 21 5.09 No 3 1.16 Yes 0 0 No -20 0.7 Yes 46 65.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68855470 + NM_004360 CDH1 0 . . . 6.71 77.9 27 6.32 Yes 6 1.06 Yes 0 0 No -27 0.75 Yes 52 51.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56806145 + NM_058216 RAD51C 0 . . . 5.21 82.78 26 5.66 Yes 14 1.51 Yes 0 0 No -25 0.8 Yes 44 75.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41005343 + NM_001164269 RAD51 0 . . . 3.42 70.85 25 5.46 No 24 1.52 Yes 0 0 No -31 0.41 No 45 79.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68477018 + NM_133509 RAD51B 0 . . . 0.33 69.13 18 4.9 No -2 0.25 No 0 0 No -17 0.45 No 46 67.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32895532 + NM_000059 BRCA2 0 . . . 0.08 66.2 28 4.76 No 20 -2.21 No 0 0 No -27 0.62 No 52 38.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538527 + NM_133509 RAD51B 0 . . . 4.35 86.24 17 4.1 No 67 0.06 No 0 0 No -21 0.72 Yes 47 53.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215637561 - NM_000465 BARD1 0 . . . 3.66 78.66 15 5.18 No 15 0.25 No 0 0 No -24 0.29 No 42 75.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59809389 - NM_032043 BRIP1 0 . . . 2.46 76.63 27 4.7 No 15 0.35 No 0 0 No -19 0.43 No 43 52.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41224404 - NM_007294 BRCA1 0 . . . 1.58 80.09 79 7.81 Yes 7 0.56 No 0 0 No -36 0.4 No 36 79.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215626120 - NM_000465 BARD1 0 . . . 0.84 69.39 28 5.38 No 52 -3.04 No 0 0 No -27 0.66 No 44 55.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94217768 - NM_005591 MRE11 0 . . . 3.46 86.04 35 8.34 Yes 42 0.77 Yes 0 0 No -34 0.37 No 45 40.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68830699 + NM_004360 CDH1 0 . . . 5.43 83.22 13 4.36 No -2 0.43 No 0 0 No -45 0.54 No 54 34.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29100175 - NM_001005735 CHEK2 0 . . . 2.41 71.89 25 4.88 No 18 1.04 Yes 0 0 No -21 0.57 No 34 85.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68855258 + NM_004360 CDH1 0 . . . 2.9 67.4 22 5.21 No 61 0.17 No 0 0 No -21 0.83 Yes 43 73.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68780031 + NM_133509 RAD51B 0 . . . 3.15 71.04 19 4.9 No 16 0.79 Yes 0 0 No -26 0.82 Yes 42 74.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68403896 + NM_133509 RAD51B 0 . . . 3.74 62.06 26 4.28 No 15 0.64 No 0 0 No -25 0.75 Yes 43 82.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215611078 - NM_000465 BARD1 0 . . . 8.87 81.15 50 6.88 Yes 14 1.41 Yes 0 0 No -30 0.86 Yes 44 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6028333 - NM_000535 PMS2 0 . . . 6.62 80.91 14 4 No 70 0.98 Yes 0 0 No -13 0.37 No 49 64.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90972659 - NM_002485 NBN 0 . . . 0.25 71.85 35 5.92 Yes 20 1.37 Yes 0 0 No -34 0.73 Yes 38 82.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68825103 + NM_133509 RAD51B 0 . . . 1.74 74.32 22 5.69 Yes 15 0.04 No 0 0 No -31 0.47 No 50 40.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190729262 + NM_000534 PMS1 0 . . . 2.99 63.69 12 4.69 No 47 0.45 No 0 0 No -59 0.37 No 53 57.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69136304 + NM_133509 RAD51B 0 . . . 6.29 85.67 32 6 Yes -3 -1.04 No 0 0 No -32 0.3 No 47 86.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41233555 - NM_007294 BRCA1 0 . . . 2.84 75.76 22 4.66 No -4 0.02 No 0 0 No -19 0.51 No 55 36.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59783862 - NM_032043 BRIP1 0 . . . 0.39 69.5 18 4.54 No 19 0.61 No 0 0 No -17 0.48 No 49 47.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68808787 + NM_004360 CDH1 0 . . . 0.81 58.67 15 5.01 No 18 1.05 Yes 0 0 No -27 0.8 Yes 40 60.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69030120 + NM_133509 RAD51B 0 . . . 6.29 67.03 17 7.74 Yes 28 0.46 No 0 0 No -35 0.6 No 38 62.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640723 + NM_000251 MSH2 0 . . . 6.4 88.76 19 5.48 No 28 1.15 Yes 0 0 No -18 0.63 No 30 96.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69108555 + NM_133509 RAD51B 0 . . . 1.68 73.11 18 6.1 Yes 27 0.68 No 0 0 No -24 0.93 Yes 41 47.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69143634 + NM_133509 RAD51B 0 . . . 8.49 88.71 9 5.29 No 15 0.7 No 0 0 No -25 0.67 Yes 43 94.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59848486 - NM_032043 BRIP1 0 . . . 7.28 83.6 38 7.81 Yes 4 1.2 Yes 0 0 No -37 0.54 No 44 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190723284 + NM_000534 PMS1 0 . . . 6.55 78.33 11 4.22 No 8 0.76 No 0 0 No -22 0.31 No 32 74.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47680426 + NM_000251 MSH2 0 . . . 2 67.51 20 4.47 No 52 -4.66 No 0 0 No -30 0.64 No 52 84.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68769436 + NM_004360 CDH1 0 . . . 1.79 80.22 11 5 No 67 -4.97 No 0 0 No -43 0.58 No 47 37.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68650562 + NM_133509 RAD51B 0 . . . 0.09 74.68 12 5.74 Yes 4 0.41 No 0 0 No -29 0.51 No 54 86.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33442082 - NM_002878 RAD51D 0 . . . 1.51 77.29 30 5.37 No 30 -3.58 No 0 0 No -29 0.8 Yes 51 57.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68500615 + NM_133509 RAD51B 0 . . . 4.64 87.64 25 4.49 No 76 -3.61 No 0 0 No -24 0.87 Yes 44 63.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68729667 + NM_133509 RAD51B 0 . . . 2.41 77.49 58 6.1 Yes 75 0.36 No 0 0 No -29 0.71 Yes 34 90.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47633552 + NM_000251 MSH2 0 . . . 4.09 84.35 26 5 No 63 1.06 Yes 0 0 No -25 0.47 No 46 66.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40989486 + NM_001164269 RAD51 0 . . . 7.74 86.37 20 6.07 Yes 10 1.11 Yes 0 0 No -23 0.85 Yes 48 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48012661 + NM_000179 MSH6 0 . . . 4.69 62.76 19 5.16 No 64 1.72 Yes 0 0 No -27 0.64 No 48 54.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68288219 + NM_133509 RAD51B 0 . . . 3.69 0 26 6.08 Yes 2 0.92 Yes 0 0 No -25 0.9 Yes 14 86.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41216388 - NM_007294 BRCA1 0 . . . 5.78 80.12 29 5.48 No -3 0.52 No 0 0 No -28 0.93 Yes 42 45.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68954270 + NM_133509 RAD51B 0 . . . 2.71 84.79 24 5.38 No 2 1.51 Yes 0 0 No -23 0.57 No 19 48.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90979208 - NM_002485 NBN 0 . . . 1.96 0 18 5.25 No 11 0.2 No 0 0 No -17 0.69 Yes 41 89.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68298903 + NM_133509 RAD51B 0 . . . 0.17 77.21 16 4.88 No 24 0.52 No 0 0 No -20 0.74 Yes 11 63.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94206042 - NM_005591 MRE11 0 . . . 3.03 69.96 45 7.04 Yes 47 -3.94 No 0 0 No -44 0.52 No 42 96.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68538577 + NM_133509 RAD51B 0 . . . 6.67 84.95 17 5.29 No 22 -1.87 No 0 0 No -21 0.48 No 50 55.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23631596 - NM_024675 PALB2 0 . . . 0.79 66.01 47 7.13 Yes -4 0.37 No 0 0 No -25 0.75 Yes 46 13.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108151216 + NM_000051 ATM 0 . . . 10.23 84.61 26 6.05 Yes 31 0.16 No 0 0 No -25 0.89 Yes 48 67.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108145064 + NM_000051 ATM 0 . . . 5.93 82.25 58 8.36 Yes 34 0.99 Yes 0 0 No -57 0.33 No 40 62.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68982210 + NM_133509 RAD51B 0 . . . 6.06 89.74 23 5.39 No 68 1.85 Yes 0 0 No -22 0.76 Yes 13 9.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32933110 + NM_000059 BRCA2 0 . . . 0.68 74.02 21 4.52 No 4 0.15 No 0 0 No -21 0.55 No 54 72.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215608656 - NM_000465 BARD1 0 . . . 1.93 70.35 19 5.38 No 60 -5.76 No 0 0 No -18 0.7 Yes 47 68.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997720 + NM_001164269 RAD51 0 . . . 2.21 70.69 14 4.47 No 39 0.59 No 0 0 No -23 0.89 Yes 61 33.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105183946 + NM_021930 RINT1 0 . . . 0.47 73.21 31 4.63 No 41 1.51 Yes 0 0 No -30 0.61 No 45 73.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190708798 + NM_000534 PMS1 0 . . . 0.15 69.85 37 6.13 Yes 68 -5.93 No 0 0 No -31 0.86 Yes 33 50.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105190097 + NM_021930 RINT1 0 . . . 0.62 68.18 19 4.58 No 61 1.56 Yes 0 0 No -18 0.76 Yes 51 22.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69069835 + NM_133509 RAD51B 0 . . . 0.89 0 21 4.79 No 22 1.41 Yes 0 0 No -20 0.75 Yes 36 86.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152341957 - NM_005431 XRCC2 0 . . . 4.35 68.27 33 6.24 Yes 64 0.14 No 0 0 No -32 0.7 Yes 38 30.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68691573 + NM_133509 RAD51B 0 . . . 2.64 71.29 35 5.84 Yes 76 1.1 Yes 0 0 No -34 0.89 Yes 48 72.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32892420 + NM_000059 BRCA2 0 . . . 0.18 61.64 40 6.55 Yes 55 -4.71 No 0 0 No -23 0.77 Yes 41 26.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68527010 + NM_133509 RAD51B 0 . . . 4.14 72.65 40 6.63 Yes 2 0.15 No 0 0 No -24 0.6 No 40 64.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94182564 - NM_005591 MRE11 0 . . . 4.1 73.54 30 3.76 No 40 0.58 No 0 0 No -29 0.35 No 46 66.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68850524 + NM_133509 RAD51B 0 . . . 5.15 82.72 13 5.63 Yes 55 0.58 No 0 0 No -21 0.31 No 44 60.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47788796 + NM_000251 MSH2 0 . . . 3.67 81.78 20 5.48 No -1 0.24 No 0 0 No -19 0.52 No 55 48.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29113720 - NM_001005735 CHEK2 0 . . . 0.42 67.1 16 5.04 No 49 0.71 No 0 0 No -20 0.71 Yes 46 76.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68363741 + NM_133509 RAD51B 0 . . . 0.85 66.77 20 5.09 No 59 -4.8 No 0 0 No -19 0.84 Yes 55 51.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90990384 - NM_002485 NBN 0 . . . 2.95 76.76 19 5.57 Yes 1 0.78 Yes 0 0 No -24 0.58 No 43 85.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68791452 + NM_004360 CDH1 0 . . . 5.88 87.08 20 4.78 No 66 1.71 Yes 0 0 No -27 0.45 No 46 54.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47669636 + NM_000251 MSH2 0 . . . 2.81 73.9 14 5.29 No NA NA NA 0 0 No -21 0.4 No 43 55.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68802494 + NM_133509 RAD51B 0 . . . 4.6 75.79 23 5.39 No 4 1.23 Yes 0 0 No -57 0.57 No 53 49.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90972500 - NM_002485 NBN 0 . . . 2.2 81.08 20 7.21 Yes 51 0.36 No 0 0 No -19 0.67 Yes 51 35.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69104921 + NM_133509 RAD51B 0 . . . 4.44 71.46 68 9.68 Yes 12 0.17 No 0 0 No -25 0.8 Yes 50 68.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47714737 + NM_000251 MSH2 0 . . . 2.23 67.54 14 3.54 No 60 0.44 No 0 0 No -25 0.72 Yes 46 46.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215588943 - NM_000465 BARD1 0 . . . 6.53 74.01 56 8.99 Yes 59 -0.68 No 0 0 No -32 0.56 No 37 79.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68844204 + NM_004360 CDH1 0 . . . 0.86 77.38 33 3.67 No 73 -5.42 No 0 0 No -27 0.63 No 49 29.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47751495 + NM_000251 MSH2 0 . . . 4.73 71.64 25 5.29 No 11 0.66 No 0 0 No -24 0.93 Yes 35 69.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131979958 + NM_005732 RAD50 0 . . . 0.77 69.65 14 4.47 No 14 0.45 No 0 0 No -23 0.37 No 44 87.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21992992 - NM_000077 CDKN2A 0 . . . 5.73 84.38 24 5.39 No 20 0.51 No 0 0 No -23 0.58 No 48 51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6044183 - NM_000535 PMS2 0 . . . 3.45 85.02 125 11.54 Yes 3 1.16 Yes 0 0 No -31 0.85 Yes 45 55.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68929263 + NM_133509 RAD51B 0 . . . 5.67 76.42 9 4.69 No 3 0.48 No 0 0 No -23 0.83 Yes 38 59.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94179727 - NM_005591 MRE11 0 . . . 7.3 74.23 25 5.49 No 61 1.28 Yes 0 0 No -20 0.59 No 29 62.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68489859 + NM_133509 RAD51B 0 . . . 5.5 77.92 19 5.66 Yes 55 0.81 Yes 0 0 No -23 0.72 Yes 43 55.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59771734 - NM_032043 BRIP1 0 . . . 0.73 69.66 31 5.45 No 52 -4.83 No 0 0 No -24 0.51 No 47 60.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108187202 + NM_000051 ATM 0 . . . 3.59 77.96 32 5.66 Yes 30 0.91 Yes 0 0 No -56 0.55 No 50 83.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59876090 - NM_032043 BRIP1 0 . . . 8.3 72.13 54 5.86 Yes 65 1 Yes 0 0 No -36 0.82 Yes 39 56.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68418219 + NM_133509 RAD51B 0 . . . 6.02 84.35 38 5.88 Yes 29 0.74 No 0 0 No -23 0.44 No 52 65.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68737479 + NM_133509 RAD51B 0 . . . 0.68 0 30 4.08 No 37 0.79 Yes 0 0 No -25 0.86 Yes 29 95.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41227362 - NM_007294 BRCA1 0 . . . 6.33 69.83 23 8.75 Yes 2 1.24 Yes 0 0 No -22 0.45 No 34 59.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33432817 - NM_002878 RAD51D 0 . . . 7.4 73.2 37 6.56 Yes 17 1.43 Yes 0 0 No -27 0.5 No 41 93.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68871438 + NM_004360 CDH1 0 . . . 0.78 84.22 20 5.09 No 33 0.58 No 0 0 No -19 0.83 Yes 25 54.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190735288 + NM_000534 PMS1 0 . . . 1.67 79.25 15 5.29 No 19 1.84 Yes 0 0 No -25 0.46 No 39 86.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48014996 + NM_000179 MSH6 0 . . . 0.17 70.34 40 7.38 Yes 61 1.02 Yes 0 0 No -25 0.72 Yes 43 51.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108141742 + NM_000051 ATM 0 . . . 3.08 78.03 29 5.92 Yes 71 0.93 Yes 0 0 No -35 0.37 No 40 75.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33427413 - NM_002878 RAD51D 0 . . . 0.22 51.44 11 5 No 19 0.45 No 0 0 No -10 0.25 No 18 62.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47635463 + NM_000251 MSH2 0 . . . 3.67 83.39 59 7.46 Yes 28 1.11 Yes 0 0 No -29 0.82 Yes 26 63.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47737429 + NM_000251 MSH2 0 . . . 3.16 66.78 24 5.48 No 16 0.67 No 0 0 No -23 0.75 Yes 42 85.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69059346 + NM_133509 RAD51B 0 . . . 4.47 65.52 23 6.35 Yes 13 0.29 No 0 0 No -27 0.7 Yes 45 88.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45803447 - NM_001048171 MUTYH 0 . . . 0.7 69.49 12 4.89 No 42 0.86 Yes 0 0 No -17 0.33 No 49 53.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41237772 - NM_007294 BRCA1 0 . . . 7.09 81.81 23 6.54 Yes 75 -2.81 No 0 0 No -23 0.37 No 42 42.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59892588 - NM_032043 BRIP1 0 . . . 6.05 67.9 17 4.64 No 17 0.8 Yes 0 0 No -23 0.71 Yes 41 77.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47779079 + NM_000251 MSH2 0 . . . 2.48 73.7 13 4.36 No 67 -5.08 No 0 0 No -22 0.62 No 51 82.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68477210 + NM_133509 RAD51B 0 . . . 6.8 94.25 14 5.34 No 34 0.87 Yes 0 0 No -21 0.64 No 47 77.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90969894 - NM_002485 NBN 0 . . . 0.5 66.37 35 6.2 Yes 52 0.57 No 0 0 No -34 0.74 Yes 49 44.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41011326 + NM_001164269 RAD51 0 . . . 3.77 76.61 21 4.81 No 20 -1.4 No 0 0 No -23 0.88 Yes 49 32.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68467318 + NM_133509 RAD51B 0 . . . 1.82 69.69 46 5.96 Yes 39 0.41 No 0 0 No -35 0.67 Yes 42 41.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21967527 - NM_000077 CDKN2A 0 . . . 0.58 71.52 26 4.6 No 64 -6.01 No 0 0 No -23 0.8 Yes 49 27.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68963994 + NM_133509 RAD51B 0 . . . 3.5 76.35 19 5.99 Yes 34 0.7 No 0 0 No -23 0.67 Yes 46 68.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29110978 - NM_001005735 CHEK2 0 . . . 1.46 79.62 54 7.26 Yes 70 0.66 No 0 0 No -28 0.86 Yes 49 87.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131919294 + NM_005732 RAD50 0 . . . 7.52 91.24 26 5.33 No 24 1.42 Yes 0 0 No -30 0.67 Yes 48 43.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68351465 + NM_133509 RAD51B 0 . . . 1.02 75.69 27 5.06 No 29 1.68 Yes 0 0 No -30 0.61 No 36 73.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94184883 - NM_005591 MRE11 0 . . . 3.59 74.67 26 5.26 No -1 0.99 Yes 0 0 No -25 0.55 No 45 70.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68806290 + NM_004360 CDH1 0 . . . 1.19 73.34 20 4.76 No 45 0.82 Yes 0 0 No -20 0.91 Yes 13 37.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37080654 + NM_000249 MLH1 0 . . . 6.03 75.78 43 6.16 Yes 39 1.06 Yes 0 0 No -35 0.3 No 47 79.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190737176 + NM_000534 PMS1 0 . . . 10.32 94.46 21 5.1 No 38 0.73 No 0 0 No -20 0.46 No 33 84.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89660674 + NM_000314 PTEN 0 . . . 4.34 69.34 20 3.77 No 68 1.3 Yes 0 0 No -23 0.81 Yes 41 50.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47650771 + NM_000251 MSH2 0 . . . 2.24 80.12 21 8.07 Yes 7 1.02 Yes 0 0 No -20 0.84 Yes 51 83.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108211944 + NM_000051 ATM 0 . . . 8.11 93.38 28 5.38 No 56 0 No 0 0 No -24 0.35 No 43 90.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41212325 - NM_007294 BRCA1 0 . . . 0.91 79.83 37 6.76 Yes 47 -1.78 No 0 0 No -40 0.44 No 54 80.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59802105 - NM_032043 BRIP1 0 . . . 5.31 80.92 23 7.35 Yes 3 0.93 Yes 0 0 No -22 0.9 Yes 50 59.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68786844 + NM_004360 CDH1 0 . . . 3.34 73.7 30 4.86 No 47 1.44 Yes 0 0 No -36 0.47 No 41 52.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89705010 + NM_000314 PTEN 0 . . . 2.31 80.29 37 5.81 Yes 33 -2.89 No 0 0 No -26 0.64 No 42 73.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56806383 + NM_058216 RAD51C 0 . . . 3.24 0 34 6.32 Yes 33 0.15 No 0 0 No -33 0.86 Yes 40 61.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131948204 + NM_005732 RAD50 0 . . . 1.79 76.75 24 7.94 Yes 17 0.38 No 0 0 No -23 0.49 No 37 55.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131931129 + NM_005732 RAD50 0 . . . 2.16 77.9 23 5.15 No 67 0.66 No 0 0 No -22 0.78 Yes 12 36.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68489918 + NM_133509 RAD51B 0 . . . 1.17 64.06 27 5.39 No 43 0.53 No 0 0 No -26 0.5 No 45 41.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108209498 + NM_000051 ATM 0 . . . 2.83 74.85 18 4.9 No 0 0.84 Yes 0 0 No -45 0.68 Yes 51 43.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89683142 + NM_000314 PTEN 0 . . . 2.28 66.15 23 4.69 No 15 0.23 No 0 0 No -22 0.94 Yes 43 91.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68356661 + NM_133509 RAD51B 0 . . . 4.14 79.62 15 5.29 No 64 -4.73 No 0 0 No -50 0.63 No 51 43.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68384230 + NM_133509 RAD51B 0 . . . 2.69 74.48 16 5.2 No 8 1.28 Yes 0 0 No -20 0.45 No 50 92.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108102679 + NM_000051 ATM 0 . . . 5.24 80.34 30 5.18 No 5 1.49 Yes 0 0 No -22 0.94 Yes 34 69.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41255769 - NM_007294 BRCA1 0 . . . 0.32 0 28 5.29 No 57 1.05 Yes 0 0 No -21 0.47 No 51 51.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52433082 - NM_004656 BAP1 0 . . . 3.6 83.01 25 4.08 No 54 -5.27 No 0 0 No -34 0.69 Yes 45 67.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47754888 + NM_000251 MSH2 0 . . . 4.84 76.81 33 5.83 Yes 6 1.45 Yes 0 0 No -30 0.56 No 43 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152357260 - NM_005431 XRCC2 0 . . . 2.43 74.58 13 4.66 No 17 1.1 Yes 0 0 No -42 0.43 No 41 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131899773 + NM_005732 RAD50 0 . . . 2.05 88.28 29 5.66 Yes 69 0.7 No 0 0 No -58 0.55 No 42 61.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68473759 + NM_133509 RAD51B 0 . . . 6.77 84.35 22 3.35 No 57 0.47 No 0 0 No -37 0.86 Yes 45 95.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215613646 - NM_000465 BARD1 0 . . . 3.18 71.83 19 4.69 No -2 -0.89 No 0 0 No -33 0.47 No 48 47.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21976132 - NM_000077 CDKN2A 0 . . . 3.45 70.43 18 3.71 No 23 1.58 Yes 0 0 No -48 0.39 No 40 64.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68512773 + NM_133509 RAD51B 0 . . . 5.13 78.85 21 5.8 Yes NA NA NA 0 0 No -32 0.48 No 48 64.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68547724 + NM_133509 RAD51B 0 . . . 6.53 74.92 12 5.94 Yes -1 0.39 No 0 0 No -19 0.6 No 12 28.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68757965 + NM_133509 RAD51B 0 . . . 1.3 0 20 4 No 49 0.68 No 0 0 No -24 0.71 Yes 13 70.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69056548 + NM_133509 RAD51B 0 . . . 6.37 85.18 23 5.8 Yes 27 0.73 No 0 0 No -25 0.5 No 36 51.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108170074 + NM_000051 ATM 0 . . . 0.7 0 21 4.57 No 32 1.42 Yes 0 0 No -56 0.64 No 26 85.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37064537 + NM_000249 MLH1 0 . . . 9.23 82.5 16 5.2 No 28 1.74 Yes 0 0 No -18 0.57 No 42 65.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94227909 - NM_005591 MRE11 0 . . . 2.41 0 18 7 Yes 54 1.09 Yes 0 0 No -17 0.51 No 49 37.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69032816 + NM_133509 RAD51B 0 . . . 10.04 91.77 50 5.87 Yes 11 1.27 Yes 0 0 No -26 0.8 Yes 47 73.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89712076 + NM_000314 PTEN 0 . . . 4.5 70.16 31 4.58 No 29 1.08 Yes 0 0 No -30 0.72 Yes 46 56.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68954545 + NM_133509 RAD51B 0 . . . 8.01 83.15 48 6.86 Yes 2 0.92 Yes 0 0 No -29 0.44 No 49 93.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1230352 + NM_000455 STK11 0 . . . 3 83.83 21 5.39 No 20 0.95 Yes 0 0 No -31 0.66 No 44 73.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68627975 + NM_133509 RAD51B 0 . . . 4.17 86.14 33 4.15 No 17 0.52 No 0 0 No -27 0.28 No 41 84.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68591290 + NM_133509 RAD51B 0 . . . 5.06 74.14 9 4.58 No 66 0.8 Yes 0 0 No -16 0.53 No 33 61.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33429146 - NM_002878 RAD51D 0 . . . 7.19 69.51 22 5.29 No 14 1.02 Yes 0 0 No -21 0.81 Yes 44 64.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37054664 + NM_000249 MLH1 0 . . . 2.41 68.34 24 5.48 No 13 0.93 Yes 0 0 No -26 0.46 No 45 64.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131968368 + NM_005732 RAD50 0 . . . 2.66 62.5 30 6.93 Yes 22 0.02 No 0 0 No -29 0.88 Yes 43 53.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68562872 + NM_133509 RAD51B 0 . . . 4.1 81.47 17 3.83 No 65 1.58 Yes 0 0 No -22 0.37 No 38 71.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47741324 + NM_000251 MSH2 0 . . . 4.57 82.33 39 6.46 Yes NA NA NA 0 0 No -25 0.71 Yes 49 51.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32908697 + NM_000059 BRCA2 0 . . . 5.06 77.01 18 5.64 Yes -3 0.8 Yes 0 0 No -20 0.45 No 44 53.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59815645 - NM_032043 BRIP1 0 . . . 4.86 71.88 17 4.8 No 55 0.01 No 0 0 No -23 0.49 No 49 82.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23642689 - NM_024675 PALB2 0 . . . 1.96 84.22 22 4.58 No 3 0.7 No 0 0 No -19 0.78 Yes 50 63.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94151942 - NM_005591 MRE11 0 . . . 1.51 63.92 22 5.83 Yes 25 1.22 Yes 0 0 No -21 0.79 Yes 33 73.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68756561 + NM_133509 RAD51B 0 . . . 2.42 76.96 21 5.2 No 65 0.66 No 0 0 No -20 0.74 Yes 38 58.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108215617 + NM_000051 ATM 0 . . . 0.1 74.68 46 4.78 No 30 -2.97 No 0 0 No -33 0.56 No 44 89.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89713143 + NM_000314 PTEN 0 . . . 8.5 79.11 45 7 Yes 7 1.28 Yes 0 0 No -26 0.66 No 42 67.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68298416 + NM_133509 RAD51B 0 . . . 2.1 71.88 28 5.38 No 44 0.75 No 0 0 No -27 0.5 No 48 75.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68614774 + NM_133509 RAD51B 0 . . . 4.92 78.15 20 5.65 Yes 27 1.63 Yes 0 0 No -25 0.73 Yes 44 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45802477 - NM_001048171 MUTYH 0 . . . 2.63 67.75 29 8.36 Yes 38 0.76 No 0 0 No -36 0.64 No 44 68.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69036063 + NM_133509 RAD51B 0 . . . 4.96 84 85 8.82 Yes 31 0.75 No 0 0 No -24 0.82 Yes 27 64.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68524509 + NM_133509 RAD51B 0 . . . 2.77 67.88 31 6.45 Yes 69 1.76 Yes 0 0 No -22 0.87 Yes 41 44.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68894716 + NM_133509 RAD51B 0 . . . 0.58 91.26 28 5.98 Yes 23 1.01 Yes 0 0 No -27 0.85 Yes 49 62.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6048990 - NM_000535 PMS2 0 . . . 2.29 70.38 41 6.26 Yes 10 -1.47 No 0 0 No -28 0.74 Yes 38 73.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68485732 + NM_133509 RAD51B 0 . . . 3.74 77.96 29 5.63 Yes 5 0.97 Yes 0 0 No -28 0.5 No 48 39.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59919584 - NM_032043 BRIP1 0 . . . 5.79 81.58 27 5.07 No 49 2.04 Yes 0 0 No -26 0.41 No 51 45.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89663869 + NM_000314 PTEN 0 . . . 1.51 80.65 11 4.58 No 33 1.15 Yes 0 0 No -30 0.21 No 50 75.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59860427 - NM_032043 BRIP1 0 . . . 6.24 0 18 4.51 No 2 0.78 Yes 0 0 No -24 0.93 Yes 47 40.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105177229 + NM_021930 RINT1 0 . . . 2.25 62.02 19 5.48 No 71 -5.55 No 0 0 No -25 0.55 No 53 63.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68823361 + NM_133509 RAD51B 0 . . . 1.07 83.62 28 5.54 No -3 1.23 Yes 0 0 No -27 0.45 No 44 68.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152358573 - NM_005431 XRCC2 0 . . . 1.98 72.51 19 4.8 No 35 0.78 Yes 0 0 No -22 0.71 Yes 47 33.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21970922 - NM_000077 CDKN2A 0 . . . 2.01 69.45 32 7 Yes 3 0.46 No 0 0 No -31 0.96 Yes 55 43.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41010308 + NM_001164269 RAD51 0 . . . 2.26 74.34 32 5.22 No 22 -3.12 No 0 0 No -28 0.65 No 37 83.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68566906 + NM_133509 RAD51B 0 . . . 0.17 67.48 15 4.23 No 5 -1.46 No 0 0 No -20 0.84 Yes 47 33.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90991827 - NM_002485 NBN 0 . . . 2.2 67.63 30 6.08 Yes 39 0.54 No 0 0 No -30 0.6 No 44 93.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45793864 - NM_001048171 MUTYH 0 . . . 0.49 64.89 22 5.04 No 6 0.3 No 0 0 No -21 0.67 Yes 41 32.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131940665 + NM_005732 RAD50 0 . . . 0.34 71.25 21 4.95 No 75 -4.3 No 0 0 No -20 0.8 Yes 48 20.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105177276 + NM_021930 RINT1 0 . . . 3.44 78.74 69 7.27 Yes 23 -3.25 No 0 0 No -36 0.53 No 46 46.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47638506 + NM_000251 MSH2 0 . . . 0.19 0 17 4.97 No 21 1.57 Yes 0 0 No -19 0.39 No 42 63.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190713729 + NM_000534 PMS1 0 . . . 0.93 70.16 39 6.63 Yes 42 1.98 Yes 0 0 No -25 0.49 No 16 81.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68366965 + NM_133509 RAD51B 0 . . . 4.5 83.82 16 6.98 Yes 6 1.06 Yes 0 0 No -35 0.58 No 48 46.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68795502 + NM_004360 CDH1 0 . . . 2.76 60.64 22 4.8 No 39 -2.97 No 0 0 No -21 0.56 No 43 42.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47734512 + NM_000251 MSH2 0 . . . 2.07 81.46 24 5.2 No 38 -2.38 No 0 0 No -50 0.41 No 42 36.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21975443 - NM_000077 CDKN2A 0 . . . 1.35 0 15 4.28 No 57 1.1 Yes 0 0 No -26 0.86 Yes 51 16.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94168264 - NM_005591 MRE11 0 . . . 1.94 0 26 5.39 No 1 0.87 Yes 0 0 No -25 0.88 Yes 53 45.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68441758 + NM_133509 RAD51B 0 . . . 3.52 64.65 40 6.98 Yes 21 0.52 No 0 0 No -31 0.71 Yes 37 59.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69110687 + NM_133509 RAD51B 0 . . . 3.69 74.02 34 4.46 No 35 0.7 No 0 0 No -28 0.53 No 37 89.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68882854 + NM_133509 RAD51B 0 . . . 5.36 77.06 11 5.35 No 8 1.55 Yes 0 0 No -11 0.59 No 41 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69121012 + NM_133509 RAD51B 0 . . . 5.68 92.34 22 5.1 No 7 0.48 No 0 0 No -41 0.6 No 51 75.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68355810 + NM_133509 RAD51B 0 . . . 1.28 63.59 23 4.27 No 62 0.43 No 0 0 No -22 0.94 Yes 48 68.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108153923 + NM_000051 ATM 0 . . . 4.21 0 46 6.88 Yes 39 -3.64 No 0 0 No -22 0.52 No 42 66.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89640056 + NM_000314 PTEN 0 . . . 6.8 81.36 14 4.95 No 65 -3.59 No 23 0.68 Yes -25 0.58 No 47 71.97 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 68341200 + NM_133509 RAD51B 0 . . . 6.82 67.13 32 7.14 Yes 62 0.89 Yes 0 0 No -31 0.78 Yes 46 70.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89679053 + NM_000314 PTEN 0 . . . 6.49 67.59 11 5.1 No 11 0.27 No 0 0 No -24 0.52 No 39 83.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47796597 + NM_000251 MSH2 0 . . . 5.17 88.25 24 4.87 No -1 0.19 No 0 0 No -23 0.8 Yes 48 57.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32924967 + NM_000059 BRCA2 0 . . . 2.46 68.53 28 6.9 Yes 16 0.31 No 0 0 No -27 0.62 No 42 73.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68626999 + NM_133509 RAD51B 0 . . . 6.67 87.71 25 5.1 No 68 -4.18 No 0 0 No -21 0.46 No 45 59.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69021319 + NM_133509 RAD51B 0 . . . 3.78 79.41 33 5.85 Yes 26 0.69 No 0 0 No -28 0.7 Yes 31 37.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131894154 + NM_005732 RAD50 0 . . . 0.09 74.68 21 5.19 No 4 0.41 No 0 0 No -20 0.83 Yes 54 72.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47790519 + NM_000251 MSH2 0 . . . 2.24 69.03 24 4.41 No 61 -0.29 No 0 0 No -23 0.83 Yes 33 77.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108139718 + NM_000051 ATM 0 . . . 0.87 63.94 20 6.16 Yes 38 0.76 No 0 0 No -19 0.92 Yes 40 50.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131973487 + NM_005732 RAD50 0 . . . 6.92 82.49 29 6.91 Yes 11 0.82 Yes 0 0 No -29 0.53 No 47 87.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47641251 + NM_000251 MSH2 0 . . . 1 73.78 16 4.66 No 68 0.86 Yes 0 0 No -22 0.39 No 40 59.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68965760 + NM_133509 RAD51B 0 . . . 7.13 82.45 24 6.71 Yes 76 -4.54 No 0 0 No -23 0.87 Yes 42 35.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68882536 + NM_133509 RAD51B 0 . . . 1.05 64.16 55 6.33 Yes 23 0.1 No 0 0 No -33 0.63 No 35 93.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23645872 - NM_024675 PALB2 0 . . . 3.54 81.72 22 5.84 Yes 58 1.41 Yes 0 0 No -25 0.66 Yes 50 85.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48011782 + NM_000179 MSH6 0 . . . 4 85.02 18 6.16 Yes 52 -1.54 No 0 0 No -17 0.38 No 44 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41005487 + NM_001164269 RAD51 0 . . . 3.29 81.95 29 4.68 No 68 1.52 Yes 0 0 No -21 0.46 No 19 95.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47697725 + NM_000251 MSH2 0 . . . 1.36 79.84 17 3.8 No 76 1.16 Yes 0 0 No -24 0.73 Yes 45 64.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68561015 + NM_133509 RAD51B 0 . . . 5.42 84.36 26 5.56 Yes 23 2.16 Yes 0 0 No -19 0.41 No 35 81.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37084746 + NM_000249 MLH1 0 . . . 2.76 83.57 19 5.07 No 32 1.05 Yes 0 0 No -25 0.77 Yes 39 75.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59833007 - NM_032043 BRIP1 0 . . . 6.61 77.75 21 7.21 Yes -1 1.44 Yes 0 0 No -20 0.82 Yes 46 70.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59850819 - NM_032043 BRIP1 0 . . . 5.46 0 35 5.58 Yes 15 0.25 No 0 0 No -29 0.76 Yes 49 46.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190664981 + NM_000534 PMS1 0 . . . 7.48 82.52 15 4.58 No 6 1.19 Yes 0 0 No -33 0.7 Yes 48 80.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41226073 - NM_007294 BRCA1 0 . . . 6.82 87.33 14 4.47 No 71 1.06 Yes 0 0 No -18 0.35 No 49 64.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47709365 + NM_000251 MSH2 0 . . . 1.92 0 19 6.88 Yes 36 0.02 No 0 0 No -25 0.66 Yes 46 80.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215651504 - NM_000465 BARD1 0 . . . 0.77 62.22 42 5.13 No 57 0.68 No 0 0 No -26 0.51 No 52 61.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68305990 + NM_133509 RAD51B 0 . . . 5.76 82.86 16 4 No 12 0.43 No 0 0 No -30 0.71 Yes 43 66.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131948757 + NM_005732 RAD50 0 . . . 4.09 79.11 17 4.69 No -2 0.19 No 0 0 No -42 0.62 No 47 87.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108108625 + NM_000051 ATM 0 . . . 7.8 79.67 40 6.7 Yes 16 0.13 No 0 0 No -30 0.62 No 43 68.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215622135 - NM_000465 BARD1 0 . . . 5.96 76.07 16 5.47 No 18 0.38 No 0 0 No -23 0.55 No 40 63.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68541503 + NM_133509 RAD51B 0 . . . 1.21 70.26 18 4.83 No 14 1.04 Yes 0 0 No -22 0.53 No 44 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90962605 - NM_002485 NBN 0 . . . 1.63 65.83 27 5.74 Yes 26 -3.24 No 0 0 No -26 0.65 No 40 49.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41024978 + NM_001164269 RAD51 0 . . . 6.98 89.48 22 4.85 No 46 1.56 Yes 0 0 No -21 0.7 Yes 49 87.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41207284 - NM_007294 BRCA1 0 . . . 6.15 77.23 19 4.81 No 0 0.46 No 0 0 No -26 0.59 No 49 44.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7572507 - NM_000546 TP53 0 . . . 6.06 80.98 27 5.2 No 75 1.47 Yes 0 0 No -26 0.78 Yes 51 45.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190683634 + NM_000534 PMS1 0 . . . 0.76 75.08 36 6 Yes 25 1.2 Yes 0 0 No -35 0.67 Yes 33 81.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47763390 + NM_000251 MSH2 0 . . . 5.53 77.41 19 5.75 Yes 39 1.5 Yes 0 0 No -18 0.76 Yes 23 87.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41246269 - NM_007294 BRCA1 0 . . . 6.02 90.01 29 7.07 Yes 19 0.24 No 0 0 No -28 0.62 No 49 54.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84397566 - NM_139076 FAM175A 0 . . . 6.33 90.82 35 5.95 Yes 8 1.75 Yes 0 0 No -34 0.73 Yes 43 69.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37044569 + NM_000249 MLH1 0 . . . 6.19 77.73 31 4.08 No 5 1.39 Yes 0 0 No -30 0.7 Yes 30 77.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89721270 + NM_000314 PTEN 0 . . . 7.99 83.48 15 3.96 No 54 0.63 No 0 0 No -27 0.79 Yes 49 45.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94176425 - NM_005591 MRE11 0 . . . 0.9 0 10 8.86 Yes 38 1.09 Yes 0 0 No -26 0.88 Yes 50 71.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152367262 - NM_005431 XRCC2 0 . . . 3.48 79.01 51 7.14 Yes 56 -3.37 No 0 0 No -26 0.28 No 61 33.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47776467 + NM_000251 MSH2 0 . . . 0.97 68.13 47 6.93 Yes -2 0.32 No 0 0 No -33 0.46 No 47 30.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47692035 + NM_000251 MSH2 0 . . . 7.8 77.39 25 5.57 Yes 18 0.84 Yes 0 0 No -24 0.89 Yes 40 84.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84396905 - NM_139076 FAM175A 0 . . . 0.77 69.76 16 5.48 No 67 1.43 Yes 0 0 No -22 0.84 Yes 46 49.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105203097 + NM_021930 RINT1 0 . . . 2.3 76.51 25 5.76 Yes 8 1.51 Yes 0 0 No -28 0.86 Yes 54 74.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68418512 + NM_133509 RAD51B 0 . . . 0.2 0 34 5.04 No 59 1.18 Yes 0 0 No -32 0.38 No 61 38.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90970870 - NM_002485 NBN 0 . . . 4.34 83.87 28 6.59 Yes 2 1.17 Yes 0 0 No -27 0.65 No 48 84.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41001619 + NM_001164269 RAD51 0 . . . 3.29 81.49 30 5.56 Yes 47 0.41 No 0 0 No -29 0.82 Yes 18 78.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89654480 + NM_000314 PTEN 0 . . . 2.34 74.02 15 5.09 No 61 1.52 Yes 0 0 No -24 0.16 No 42 46.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94226730 - NM_005591 MRE11 0 . . . 2.49 66.85 39 4.51 No 47 -4.35 No 0 0 No -28 0.67 Yes 35 27.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56770247 + NM_058216 RAD51C 0 . . . 0.05 0 32 5.92 Yes 32 1.29 Yes 0 0 No -31 0.81 Yes 26 65.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90950813 - NM_002485 NBN 0 . . . 8.9 92.4 29 5.64 Yes 8 0.82 Yes 0 0 No -28 0.91 Yes 45 89.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89641718 + NM_000314 PTEN 0 . . . 2.86 74.81 19 5.37 No 67 1.68 Yes 0 0 No -22 0.51 No 35 97.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48028817 + NM_000179 MSH6 0 . . . 5.89 81.81 26 4.96 No 15 1.07 Yes 0 0 No -22 0.74 Yes 43 56.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47778355 + NM_000251 MSH2 0 . . . 6.51 79.05 14 5.36 No 52 2.15 Yes 0 0 No -28 0.63 No 41 37.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108135799 + NM_000051 ATM 0 . . . 0.09 0 19 5.36 No 29 -3.25 No 0 0 No -28 0.73 Yes 38 32.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47705970 + NM_000251 MSH2 0 . . . 3.06 66.46 33 5.07 No 16 1.09 Yes 0 0 No -32 0.59 No 42 89.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59880804 - NM_032043 BRIP1 0 . . . 2.2 76.14 35 6.4 Yes 32 1.12 Yes 0 0 No -34 0.81 Yes 26 91.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32925098 + NM_000059 BRCA2 0 . . . 4.38 72.78 22 4.69 No 4 0.34 No 0 0 No -21 0.71 Yes 51 55.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69103690 + NM_133509 RAD51B 0 . . . 9.45 91.9 27 5.23 No 44 1.75 Yes 0 0 No -26 0.59 No 40 84.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47768130 + NM_000251 MSH2 0 . . . 6.63 81.15 23 4.22 No 44 0.28 No 0 0 No -22 0.47 No 46 79.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94196454 - NM_005591 MRE11 0 . . . 7.62 82.12 28 5.47 No 20 0.57 No 0 0 No -27 0.78 Yes 38 49.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59845810 - NM_032043 BRIP1 0 . . . 2.63 76.3 32 5.91 Yes 5 2.07 Yes 0 0 No -32 0.44 No 53 74.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131965707 + NM_005732 RAD50 0 . . . 10.88 90 30 8.11 Yes 0 0.87 Yes 0 0 No -29 0.71 Yes 42 54.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152351707 - NM_005431 XRCC2 0 . . . 1.4 0 30 5.03 No 49 -1.33 No 0 0 No -29 0.62 No 36 78.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23613561 - NM_024675 PALB2 0 . . . 0.94 82.93 16 4.69 No 72 0.6 No 0 0 No -40 0.66 Yes 44 49.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47657611 + NM_000251 MSH2 0 . . . 2.94 72.86 35 6.16 Yes 11 -2.65 No 0 0 No -35 0.63 No 49 52.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207496 - NM_007294 BRCA1 0 . . . 1.44 83.69 34 5.69 Yes 9 0.69 No 0 0 No -31 0.57 No 48 72.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68951561 + NM_133509 RAD51B 0 . . . 4.96 83.45 20 4.65 No -2 0.72 No 0 0 No -19 0.49 No 48 45.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41271828 - NM_007294 BRCA1 0 . . . 5.16 82.26 28 5.22 No 5 0.42 No 0 0 No -27 0.73 Yes 44 35.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68433957 + NM_133509 RAD51B 0 . . . 2.69 78.6 15 5.41 No 27 0.3 No 0 0 No -23 0.74 Yes 31 55.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131914243 + NM_005732 RAD50 0 . . . 2.3 84.41 17 5.65 Yes 31 1.32 Yes 0 0 No -17 0.4 No 29 69.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59807766 - NM_032043 BRIP1 0 . . . 6.06 74.13 14 5.57 Yes 64 1.37 Yes 0 0 No -18 0.64 No 43 83.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84388173 - NM_139076 FAM175A 0 . . . 0.4 0 27 5.56 Yes 14 1.09 Yes 0 0 No -26 0.37 No 44 67.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68664248 + NM_133509 RAD51B 0 . . . 0.46 65.95 39 6.82 Yes 68 0.66 No 0 0 No -22 0.6 No 37 96.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190682906 + NM_000534 PMS1 0 . . . 4.06 67.99 23 6.05 Yes 17 0.9 Yes 0 0 No -22 0.76 Yes 41 75.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6038457 - NM_000535 PMS2 0 . . . 4.9 83.88 28 5.2 No 5 1.22 Yes 0 0 No -27 0.3 No 53 75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68539762 + NM_133509 RAD51B 0 . . . 1.68 0 13 5.65 Yes 67 -2.79 No 0 0 No -29 0.65 No 56 60.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131896758 + NM_005732 RAD50 0 . . . 5.62 76.47 26 5.04 No 10 1.36 Yes 0 0 No -26 0.44 No 48 92.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7566774 - NM_000546 TP53 0 . . . 1.52 66.46 32 6.16 Yes 71 0.59 No 0 0 No -31 0.52 No 23 83.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68559565 + NM_133509 RAD51B 0 . . . 0.9 0 36 4.6 No 22 -1.99 No 0 0 No -33 0.75 Yes 44 77.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33442491 - NM_002878 RAD51D 0 . . . 4.27 73.6 23 4.46 No 3 0.26 No 0 0 No -54 0.8 Yes 55 65.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68810987 + NM_133509 RAD51B 0 . . . 1.28 66.99 22 4.56 No 10 0.17 No 0 0 No -21 0.52 No 41 43.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47726056 + NM_000251 MSH2 0 . . . 0.07 0 24 4.96 No 44 1.17 Yes 0 0 No -23 0.94 Yes 38 54.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215650952 - NM_000465 BARD1 0 . . . 4.28 78.39 18 4.42 No 5 0.56 No 0 0 No -30 0.56 No 47 25.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59836821 - NM_032043 BRIP1 0 . . . 5.2 75.02 18 6 Yes 42 0.16 No 0 0 No -17 0.41 No 44 80.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37088575 + NM_000249 MLH1 0 . . . 5.01 79.1 32 4.56 No 10 0.34 No 0 0 No -25 0.67 Yes 48 64.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190672528 + NM_000534 PMS1 0 . . . 5.32 82.39 16 6.08 Yes 75 2.32 Yes 0 0 No -15 0.52 No 45 71.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68958886 + NM_133509 RAD51B 0 . . . 8.08 71.78 20 4.88 No 38 2.04 Yes 0 0 No -19 0.45 No 41 52.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68692245 + NM_133509 RAD51B 0 . . . 2.7 78.17 15 5.39 No 76 1.74 Yes 0 0 No -47 0.42 No 49 93.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68516601 + NM_133509 RAD51B 0 . . . 1.13 83.82 25 5 No 65 1.31 Yes 0 0 No -24 0.47 No 42 61.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56804836 + NM_058216 RAD51C 0 . . . 3.96 72.83 18 5.51 No -1 1.31 Yes 0 0 No -18 0.58 No 39 89.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152358410 - NM_005431 XRCC2 0 . . . 1.44 82.96 48 4.88 No 73 -5.56 No 0 0 No -28 0.65 No 42 43.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68508316 + NM_133509 RAD51B 0 . . . 6.66 86.26 21 5.83 Yes 45 0.98 Yes 0 0 No -20 0.55 No 26 79.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7573097 - NM_000546 TP53 0 . . . 1.66 0 19 5.89 Yes 16 0.08 No 0 0 No -32 0.54 No 42 89.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41002586 + NM_001164269 RAD51 0 . . . 1.23 74.09 18 5.63 Yes 53 0.65 No 0 0 No -26 0.52 No 52 50.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69017797 + NM_133509 RAD51B 0 . . . 3.39 78.12 26 4.86 No 2 1.15 Yes 0 0 No -25 0.51 No 49 68.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89629393 + NM_000314 PTEN 0 . . . 3.02 73.76 13 4.9 No 21 -1.42 No 0 0 No -30 0.31 No 53 69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68836841 + NM_004360 CDH1 0 . . . 3.74 78.25 13 5.1 No 51 0.69 No 0 0 No -22 0.47 No 52 51.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68778551 + NM_004360 CDH1 0 . . . 0.83 65.53 22 5.72 Yes 50 1.45 Yes 0 0 No -17 0.49 No 60 35.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75512982 - NM_001040108 MLH3 0 . . . 2.63 80.28 29 5.85 Yes 22 0.14 No 0 0 No -28 0.74 Yes 51 49.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997684 + NM_001164269 RAD51 0 . . . 3.91 78.65 29 7.01 Yes 3 0.6 No 0 0 No -28 0.9 Yes 39 42.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32905527 + NM_000059 BRCA2 0 . . . 0.51 69.87 29 5.86 Yes 13 0.6 No 0 0 No -28 0.66 No 29 51.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29108874 - NM_001005735 CHEK2 0 . . . 1.95 68.59 38 6.03 Yes -2 0.8 Yes 0 0 No -37 0.62 No 33 38.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89642921 + NM_000314 PTEN 0 . . . 1.85 65.54 27 5.39 No 71 -3.42 No 0 0 No -26 0.59 No 45 69.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68310574 + NM_133509 RAD51B 0 . . . 1.99 0 14 5.48 No 44 1.49 Yes 0 0 No -23 0.64 No 31 79.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108236003 + NM_000051 ATM 0 . . . 5.56 83.83 30 4.95 No 43 0.03 No 0 0 No -29 0.44 No 43 75.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68973656 + NM_133509 RAD51B 0 . . . 4.73 83.93 59 5.93 Yes 56 -3.8 No 0 0 No -35 0.51 No 34 46.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94220051 - NM_005591 MRE11 0 . . . 2.1 64.7 12 4.24 No 60 1.16 Yes 0 0 No -19 0.51 No 45 52.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29086103 - NM_001005735 CHEK2 0 . . . 2.21 75.33 12 3.77 No 73 0.36 No 0 0 No -38 0.56 No 27 75.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37089484 + NM_000249 MLH1 0 . . . 2.48 0 28 7.06 Yes 72 -5.14 No 0 0 No -27 0.9 Yes 50 64.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68913391 + NM_133509 RAD51B 0 . . . 4.09 67.1 17 5.47 No 54 -2.4 No 0 0 No -31 0.54 No 36 78.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90974157 - NM_002485 NBN 0 . . . 9.7 82.76 24 5.39 No 6 1.55 Yes 0 0 No -22 0.68 Yes 40 90.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1209927 + NM_000455 STK11 0 . . . 0.73 0 21 5.83 Yes NA NA NA 0 0 No -30 0.52 No 46 63.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6045469 - NM_000535 PMS2 0 . . . 4.55 67.9 17 5.44 No 23 -3.38 No 0 0 No -28 0.85 Yes 50 74.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59810099 - NM_032043 BRIP1 0 . . . 1.57 76.04 19 4.55 No 45 0.3 No 0 0 No -19 0.57 No 48 62.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56776733 + NM_058216 RAD51C 0 . . . 3.88 69.38 20 5 No 72 0.1 No 0 0 No -26 0.72 Yes 31 51.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68786225 + NM_004360 CDH1 0 . . . 7.19 83.24 19 6.77 Yes 24 1.66 Yes 0 0 No -32 0.66 No 44 74.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108215067 + NM_000051 ATM 0 . . . 2.12 0 34 7.86 Yes 10 0.34 No 0 0 No -33 0.55 No 47 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68518219 + NM_133509 RAD51B 0 . . . 0.23 50.13 35 5.2 No 5 -2.47 No 0 0 No -26 0.77 Yes 31 92.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69070396 + NM_133509 RAD51B 0 . . . 5.14 73.52 23 4.91 No 24 0.68 No 0 0 No -22 0.77 Yes 34 77.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68330810 + NM_133509 RAD51B 0 . . . 3.83 74.97 23 6.32 Yes 54 -4.06 No 0 0 No -22 0.97 Yes 52 64.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29113393 - NM_001005735 CHEK2 0 . . . 0.69 67.65 26 6.63 Yes 52 0.22 No 0 0 No -24 0.68 Yes 44 58.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108116909 + NM_000051 ATM 0 . . . 2.53 68.47 15 4.7 No 73 -1.99 No 0 0 No -26 0.51 No 35 68.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69118934 + NM_133509 RAD51B 0 . . . 2.37 64.37 14 5.47 No 48 0.57 No 0 0 No -23 0.39 No 10 44.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89685027 + NM_000314 PTEN 0 . . . 3.92 72.01 18 3.42 No 74 1.89 Yes 0 0 No -23 0.57 No 49 57.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59795560 - NM_032043 BRIP1 0 . . . 2.33 62.65 26 5 No 10 0.25 No 0 0 No -25 0.92 Yes 48 46.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6038666 - NM_000535 PMS2 0 . . . 7.55 87.36 9 4.8 No 45 0.24 No 0 0 No -22 0.37 No 45 86.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68746498 + NM_133509 RAD51B 0 . . . 0.26 75.18 24 5.71 Yes 42 -2.31 No 0 0 No -23 0.58 No 46 40.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68753614 + NM_133509 RAD51B 0 . . . 0.83 64.92 62 8.89 Yes 9 0.72 No 0 0 No -20 0.72 Yes 49 62.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68580277 + NM_133509 RAD51B 0 . . . 0.85 79.12 12 5.03 No 51 0.75 No 0 0 No -18 0.43 No 48 97.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68595385 + NM_133509 RAD51B 0 . . . 1.02 0 37 6.6 Yes 63 -4.33 No 0 0 No -30 0.59 No 48 59.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94179817 - NM_005591 MRE11 0 . . . 0.83 68.57 21 4.28 No 47 0.31 No 0 0 No -20 0.69 Yes 31 78.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68828295 + NM_133509 RAD51B 0 . . . 8.57 76.93 22 4.08 No 14 0.91 Yes 0 0 No -43 0.69 Yes 48 69.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59901519 - NM_032043 BRIP1 0 . . . 6.34 76.87 29 7.5 Yes 45 0.83 Yes 0 0 No -29 0.56 No 36 87.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59813270 - NM_032043 BRIP1 0 . . . 1.02 71.33 15 4.58 No 75 1.01 Yes 0 0 No -32 0.46 No 51 32.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89727516 + NM_000314 PTEN 0 . . . 4.19 71.09 39 4.64 No 31 0.17 No 0 0 No -33 0.19 No 27 69.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32908409 + NM_000059 BRCA2 0 . . . 4.04 73.49 24 6.73 Yes 40 0.92 Yes 0 0 No -23 0.53 No 54 39.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29111104 - NM_001005735 CHEK2 0 . . . 3.76 76.72 80 8.12 Yes 42 0.69 No 0 0 No -28 0.68 Yes 40 70.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68622688 + NM_133509 RAD51B 0 . . . 1.19 0 29 5.7 Yes 57 0.44 No 0 0 No -24 0.42 No 50 78.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68652806 + NM_133509 RAD51B 0 . . . 2.08 63.91 22 4.9 No 1 0.35 No 0 0 No -21 0.89 Yes 46 42.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29113758 - NM_001005735 CHEK2 0 . . . 2.44 0 26 5.39 No 11 0.75 No 0 0 No -25 0.63 No 42 76.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47725190 + NM_000251 MSH2 0 . . . 9.39 89.51 27 5.1 No 14 1.33 Yes 0 0 No -26 0.5 No 44 90.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75504157 - NM_001040108 MLH3 0 . . . 4.39 82.16 25 3.9 No 57 -4.12 No 0 0 No -25 0.7 Yes 47 94.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68707090 + NM_133509 RAD51B 0 . . . 6.06 86.81 15 4.58 No 62 0.65 No 0 0 No -18 0.57 No 40 54.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183332 - NM_005591 MRE11 0 . . . 6.83 82.11 24 5.39 No 42 1.28 Yes 0 0 No -23 0.72 Yes 43 75.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68867681 + NM_004360 CDH1 0 . . . 5.12 89.01 36 5.91 Yes 62 0.57 No 0 0 No -23 0.66 No 49 42.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89663852 + NM_000314 PTEN 0 . . . 0.98 70.25 25 6.16 Yes 16 1.12 Yes 0 0 No -24 0.51 No 42 92.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68399090 + NM_133509 RAD51B 0 . . . 3.26 62.37 13 4.36 No 20 0.59 No 0 0 No -28 0.91 Yes 31 48.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59899993 - NM_032043 BRIP1 0 . . . 7.19 79.4 28 4.1 No 40 0.95 Yes 0 0 No -22 0.86 Yes 36 78.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41216493 - NM_007294 BRCA1 0 . . . 0.16 67.28 28 4.97 No 27 0.72 No 0 0 No -27 0.59 No 38 79.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29137657 - NM_001005735 CHEK2 0 . . . 5.28 78.79 21 5 No 7 1.22 Yes 0 0 No -20 0.83 Yes 51 83.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94188488 - NM_005591 MRE11 0 . . . 1.91 74.09 29 5.72 Yes 47 -3.74 No 0 0 No -28 0.88 Yes 49 54.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108180476 + NM_000051 ATM 0 . . . 7.29 79.47 19 5.48 No 64 -5.03 No 0 0 No -18 0.63 No 47 53.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215667982 - NM_000465 BARD1 0 . . . 5.48 78.11 35 8.1 Yes 63 0.31 No 0 0 No -34 0.87 Yes 49 50.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47628411 + NM_000251 MSH2 0 . . . 3.01 0 10 4.47 No 39 0.57 No 0 0 No -33 0.73 Yes 32 68.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69021094 + NM_133509 RAD51B 0 . . . 5.28 84.46 12 5.48 No 46 0.95 Yes 0 0 No -24 0.42 No 53 78.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68439273 + NM_133509 RAD51B 0 . . . 5.51 82.44 21 4.62 No 65 0.53 No 0 0 No -28 0.34 No 41 82.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59810577 - NM_032043 BRIP1 0 . . . 3.29 77.68 20 4.9 No 74 0.8 Yes 0 0 No -19 0.58 No 47 88.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75484167 - NM_001040108 MLH3 0 . . . 6.05 86.2 36 6.45 Yes 52 1.47 Yes 0 0 No -35 0.76 Yes 49 94.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69119641 + NM_133509 RAD51B 0 . . . 6.09 91.47 26 7.07 Yes 5 1.46 Yes 0 0 No -25 0.87 Yes 49 48.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215591493 - NM_000465 BARD1 0 . . . 0.53 74.08 31 5.5 No 35 1.62 Yes 0 0 No -24 0.41 No 39 77.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68600923 + NM_133509 RAD51B 0 . . . 0.54 67.34 18 4.58 No 57 1.66 Yes 0 0 No -17 0.63 No 41 70.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84404158 - NM_139076 FAM175A 0 . . . 1.99 72.36 22 4.38 No 52 1.71 Yes 0 0 No -43 0.34 No 52 45.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190684224 + NM_000534 PMS1 0 . . . 3.74 79.21 31 6.08 Yes 5 1.16 Yes 0 0 No -30 0.83 Yes 53 44.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33426754 - NM_002878 RAD51D 0 . . . 3.01 81.84 22 5.83 Yes 3 0.14 No 0 0 No -21 0.53 No 45 72.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68295928 + NM_133509 RAD51B 0 . . . 5.52 70.22 25 5.55 No 47 1.14 Yes 0 0 No -24 0.62 No 44 74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105195648 + NM_021930 RINT1 0 . . . 4.16 76.47 18 4.69 No 74 -1.76 No 0 0 No -17 0.78 Yes 45 62.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69060475 + NM_133509 RAD51B 0 . . . 2.94 77.11 17 5.57 Yes 59 1 Yes 0 0 No -16 0.68 Yes 51 40.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29136690 - NM_001005735 CHEK2 0 . . . 1.92 68.94 21 6.6 Yes 11 1.13 Yes 0 0 No -20 0.66 No 43 90.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47638426 + NM_000251 MSH2 0 . . . 3.87 85.02 17 3.99 No 30 -0.35 No 0 0 No -27 0.79 Yes 46 68.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108183937 + NM_000051 ATM 0 . . . 10.75 90.37 23 5.39 No 28 1.96 Yes 0 0 No -22 0.8 Yes 30 93.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68564419 + NM_133509 RAD51B 0 . . . 6.86 81.93 31 5.83 Yes 64 0.5 No 0 0 No -30 0.92 Yes 50 71.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94150491 - NM_005591 MRE11 0 . . . 2.05 82.58 34 6.38 Yes 39 0.04 No 0 0 No -27 0.34 No 40 37.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68736284 + NM_133509 RAD51B 0 . . . 7.14 75.44 17 6.99 Yes 1 2.12 Yes 0 0 No -16 0.77 Yes 41 79.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69100551 + NM_133509 RAD51B 0 . . . 5.85 92.87 25 5.39 No 41 -1.41 No 0 0 No -24 0.72 Yes 46 73.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68691594 + NM_133509 RAD51B 0 . . . 0.64 77.44 40 7.37 Yes 6 0.98 Yes 0 0 No -29 0.88 Yes 52 83.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37048435 + NM_000249 MLH1 0 . . . 4.87 62.63 21 4.73 No 19 0.77 Yes 0 0 No -20 0.59 No 39 50.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68537867 + NM_133509 RAD51B 0 . . . 1.33 0 14 5.48 No 26 0.67 No 0 0 No -20 0.2 No 28 39.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84385661 - NM_139076 FAM175A 0 . . . 5 77.06 16 4.69 No 48 0.37 No 0 0 No -26 0.28 No 48 63.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215658948 - NM_000465 BARD1 0 . . . 3.67 84 16 5.04 No 2 1.5 Yes 0 0 No -20 0.66 No 11 81.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90961645 - NM_002485 NBN 0 . . . 0.43 0 21 4.88 No 70 1.25 Yes 0 0 No -20 0.89 Yes 44 82.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37080303 + NM_000249 MLH1 0 . . . 4.99 81.78 31 5.82 Yes 5 0.21 No 0 0 No -31 0.46 No 47 62.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68636131 + NM_133509 RAD51B 0 . . . 3.11 71.9 38 6.07 Yes -2 1.38 Yes 0 0 No -18 0.36 No 47 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32969701 + NM_000059 BRCA2 0 . . . 4.21 73.28 32 5.4 No 71 0.74 No 0 0 No -26 0.5 No 49 50.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59895112 - NM_032043 BRIP1 0 . . . 6.73 79.05 20 4.69 No 4 1.58 Yes 0 0 No -19 0.84 Yes 31 40.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215622055 - NM_000465 BARD1 0 . . . 4.63 72.65 18 4.14 No 43 0.14 No 0 0 No -38 0.57 No 48 43.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32893536 + NM_000059 BRCA2 0 . . . 3.49 66.67 28 5.62 Yes 70 -5.89 No 0 0 No -27 0.79 Yes 45 83.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29139274 - NM_001005735 CHEK2 0 . . . 10.44 87.79 26 5.35 No 19 1.29 Yes 0 0 No -25 0.92 Yes 39 87.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89714214 + NM_000314 PTEN 0 . . . 3.12 70.87 22 5.29 No 2 0.98 Yes 0 0 No -49 0.67 Yes 42 42.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215670476 - NM_000465 BARD1 0 . . . 4.66 0 45 8.31 Yes 39 0.9 Yes 0 0 No -32 0.43 No 38 55.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7571981 - NM_000546 TP53 0 . . . 5.91 77.81 35 4.87 No 56 -2.62 No 0 0 No -34 0.54 No 47 82.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105206241 + NM_021930 RINT1 0 . . . 7.03 83.99 29 5.56 Yes 18 0.11 No 0 0 No -28 0.63 No 44 61.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108111585 + NM_000051 ATM 0 . . . 0.16 68.99 22 5.7 Yes 45 0.78 Yes 0 0 No -21 0.94 Yes 37 39.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89689390 + NM_000314 PTEN 0 . . . 7.15 86.05 15 5.29 No 6 1.03 Yes 0 0 No -21 0.65 No 45 58.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94160921 - NM_005591 MRE11 0 . . . 4.25 79.15 46 6.78 Yes -4 1.04 Yes 0 0 No -45 0.43 No 35 55.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29103049 - NM_001005735 CHEK2 0 . . . 1.69 0 18 4.69 No 24 1.22 Yes 0 0 No -34 0.3 No 34 79.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37078474 + NM_000249 MLH1 0 . . . 4.34 77.1 42 5.04 No 50 0.7 No 0 0 No -26 0.56 No 51 67.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68865845 + NM_004360 CDH1 0 . . . 0.57 53.05 20 3.84 No 46 0.71 No 0 0 No -20 0.46 No 18 29.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68324236 + NM_133509 RAD51B 0 . . . 5.41 84.88 15 4.08 No 57 1.03 Yes 0 0 No -23 0.49 No 46 66.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68414435 + NM_133509 RAD51B 0 . . . 3.02 0 25 4.13 No 44 -2.55 No 0 0 No -28 0.73 Yes 49 70.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23631544 - NM_024675 PALB2 0 . . . 5.27 77.12 38 6.47 Yes 35 0.82 Yes 0 0 No -35 0.8 Yes 46 80.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6033123 - NM_000535 PMS2 0 . . . 4.72 86 47 7.06 Yes 6 0.48 No 0 0 No -29 0.6 No 12 60.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37086857 + NM_000249 MLH1 0 . . . 9.24 87.23 24 6.07 Yes 47 0.79 Yes 0 0 No -27 0.89 Yes 49 68.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94164031 - NM_005591 MRE11 0 . . . 1.43 58.45 33 6.78 Yes 59 0.1 No 0 0 No -32 0.83 Yes 32 18.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23635361 - NM_024675 PALB2 0 . . . 5.3 74.19 13 5 No 12 1 Yes 0 0 No -21 0.57 No 46 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108164745 + NM_000051 ATM 0 . . . 5.5 79.01 16 4.51 No 51 1.05 Yes 0 0 No -24 0.56 No 48 44.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89650818 + NM_000314 PTEN 0 . . . 5.52 92.86 32 5.39 No 40 1.32 Yes 0 0 No -35 0.39 No 49 84.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29137452 - NM_001005735 CHEK2 0 . . . 6.26 83.65 40 5.27 No 46 -3.23 No 0 0 No -20 0.35 No 48 62.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108151582 + NM_000051 ATM 0 . . . 3.47 73.57 35 4.63 No 62 1.06 Yes 0 0 No -34 0.84 Yes 50 71.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68689093 + NM_133509 RAD51B 0 . . . 0.57 67.67 37 4.78 No 1 0.12 No 0 0 No -23 0.33 No 57 35.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190696821 + NM_000534 PMS1 0 . . . 3.24 61.26 22 5.49 No 69 0.49 No 0 0 No -29 0.74 Yes 60 36.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68854334 + NM_004360 CDH1 0 . . . 4.86 81.57 27 7.48 Yes 68 0.58 No 0 0 No -26 0.68 Yes 44 71.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37061261 + NM_000249 MLH1 0 . . . 0.05 67.38 9 3.87 No 27 0.87 Yes 0 0 No -59 0.41 No 20 77.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131969944 + NM_005732 RAD50 0 . . . 4.25 69.28 17 5.29 No 16 1.18 Yes 0 0 No -21 0.56 No 42 90.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190711849 + NM_000534 PMS1 0 . . . 3.59 67.87 19 4.77 No 21 1.69 Yes 0 0 No -22 0.56 No 42 85.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68895593 + NM_133509 RAD51B 0 . . . 5.8 75.36 24 3.98 No 6 1.55 Yes 0 0 No -23 0.29 No 44 68.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105208949 + NM_021930 RINT1 0 . . . 0.04 70.35 33 6.37 Yes 37 1.22 Yes 0 0 No -32 0.47 No 41 65.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59765301 - NM_032043 BRIP1 0 . . . 3.36 72.48 12 4.03 No 8 -1.33 No 0 0 No -23 0.48 No 33 64.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89702019 + NM_000314 PTEN 0 . . . 4.33 72.23 20 4.58 No 71 -6.53 No 0 0 No -29 0.46 No 56 49.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68471112 + NM_133509 RAD51B 0 . . . 6.36 81.59 16 4.48 No 3 0.03 No 0 0 No -24 0.68 Yes 36 73.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32905234 + NM_000059 BRCA2 0 . . . 4.28 88.76 21 4.68 No 52 0.83 Yes 0 0 No -20 0.67 Yes 29 87.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68520540 + NM_133509 RAD51B 0 . . . 6.03 80.72 12 4.8 No 19 0.96 Yes 0 0 No -56 0.49 No 39 72.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190720866 + NM_000534 PMS1 0 . . . 4.13 90.44 13 5.09 No 4 0.53 No 0 0 No -23 0.93 Yes 51 80.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108119923 + NM_000051 ATM 0 . . . 7.09 81.06 27 5.38 No 45 0.63 No 0 0 No -31 0.45 No 45 78.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32888198 + NM_000059 BRCA2 0 . . . 1.42 75.42 12 5 No 69 -3.49 No 0 0 No -42 0.52 No 39 58.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152351136 - NM_005431 XRCC2 0 . . . 0.9 68.84 17 4.8 No 52 0.03 No 0 0 No -19 0.42 No 48 76.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68842780 + NM_133509 RAD51B 0 . . . 1.05 63.95 20 5.34 No 56 0.64 No 0 0 No -19 0.78 Yes 37 47.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108138712 + NM_000051 ATM 0 . . . 0.3 64.96 24 5.39 No 46 1.66 Yes 0 0 No -23 0.78 Yes 27 79.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68596844 + NM_133509 RAD51B 0 . . . 7.23 87.69 29 6.09 Yes 41 0.58 No 0 0 No -28 0.84 Yes 45 82.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69018292 + NM_133509 RAD51B 0 . . . 4.59 71.28 16 6.86 Yes 17 1.24 Yes 0 0 No -28 0.61 No 41 83.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105209368 + NM_021930 RINT1 0 . . . 1.56 76.63 16 5.04 No 58 -4.02 No 0 0 No -20 0.66 No 48 71.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89625993 + NM_000314 PTEN 0 . . . 2.28 65.45 16 4.34 No 28 -3.57 No 0 0 No -27 0.45 No 48 66.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94187812 - NM_005591 MRE11 0 . . . 0.01 0 19 5.41 No 76 -5.88 No 0 0 No -24 0.52 No 60 64.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1217434 + NM_000455 STK11 0 . . . 0.2 0 25 6.46 Yes 58 1.16 Yes 0 0 No -24 0.78 Yes 43 62.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69051372 + NM_133509 RAD51B 0 . . . 9.05 85.24 23 6.23 Yes 43 1.21 Yes 0 0 No -22 0.73 Yes 39 83.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68439215 + NM_133509 RAD51B 0 . . . 2.17 69.66 22 5.83 Yes 7 0.55 No 0 0 No -21 0.8 Yes 51 74.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68515391 + NM_133509 RAD51B 0 . . . 3.09 78.38 39 6.4 Yes 53 0.34 No 0 0 No -34 0.43 No 47 70.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59799668 - NM_032043 BRIP1 0 . . . 1.39 74.68 12 5.34 No 54 -2.86 No 0 0 No -20 0.38 No 54 72.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94193308 - NM_005591 MRE11 0 . . . 2.08 0 24 5.29 No 6 1.27 Yes 0 0 No -23 0.94 Yes 33 65.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68843613 + NM_004360 CDH1 0 . . . 7.14 86.16 22 6.07 Yes 7 0.48 No 0 0 No -21 0.54 No 51 59.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68770828 + NM_004360 CDH1 0 . . . 0.85 76.63 38 5.54 No 40 -3.03 No 0 0 No -32 0.5 No 50 62.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68531332 + NM_133509 RAD51B 0 . . . 2.54 64.6 16 4.93 No 17 0.75 No 0 0 No -15 0.5 No 41 76.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89683117 + NM_000314 PTEN 0 . . . 2.5 61.05 26 5.66 Yes 73 -2.07 No 0 0 No -25 0.82 Yes 44 46.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152342590 - NM_005431 XRCC2 0 . . . 3.45 77.24 13 6.93 Yes 44 0.15 No 0 0 No -22 0.59 No 38 55.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68619401 + NM_133509 RAD51B 0 . . . 2.45 78.27 35 5.39 No 74 1.19 Yes 0 0 No -34 0.65 No 52 60.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108126730 + NM_000051 ATM 0 . . . 5.5 82.99 31 5.66 Yes 15 0.44 No 0 0 No -30 0.93 Yes 43 72.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152372056 - NM_005431 XRCC2 0 . . . 8.26 86.09 30 6.86 Yes 20 -1.77 No 0 0 No -29 0.67 Yes 47 75.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190743095 + NM_000534 PMS1 0 . . . 0.35 64.59 34 5.98 Yes 31 -2.03 No 0 0 No -33 0.5 No 48 45.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94152423 - NM_005591 MRE11 0 . . . 3.32 73.73 28 6.51 Yes 57 -5.84 No 0 0 No -27 0.57 No 49 63.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94196359 - NM_005591 MRE11 0 . . . 4.27 74.02 13 4.79 No 67 1.67 Yes 0 0 No -19 0.29 No 35 96.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105195431 + NM_021930 RINT1 0 . . . 3.76 69.25 33 6.25 Yes 45 0.3 No 26 0.75 Yes -21 0.49 No 55 51.17 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 94176182 - NM_005591 MRE11 0 . . . 1.73 80.77 28 7.68 Yes 66 -2.98 No 0 0 No -27 0.95 Yes 37 94.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59854187 - NM_032043 BRIP1 0 . . . 2.87 66.24 21 5.17 No 73 1.14 Yes 0 0 No -23 0.54 No 36 87.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47769579 + NM_000251 MSH2 0 . . . 7.25 84.77 21 5.08 No 17 0.01 No 0 0 No -20 0.79 Yes 52 66.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190680876 + NM_000534 PMS1 0 . . . 0.07 77.04 25 6.62 Yes 45 1.44 Yes 0 0 No -24 0.91 Yes 50 53.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47771713 + NM_000251 MSH2 0 . . . 4.86 71.54 23 5.19 No 65 0.41 No 0 0 No -22 0.89 Yes 47 74.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32897334 + NM_000059 BRCA2 0 . . . 4.24 87.77 36 6.76 Yes 73 1.26 Yes 0 0 No -35 0.42 No 22 73.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89705810 + NM_000314 PTEN 0 . . . 4.69 80.91 43 6.32 Yes 3 0.7 No 0 0 No -33 0.88 Yes 43 60.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29124417 - NM_001005735 CHEK2 0 . . . 1.02 74.31 23 5.2 No 42 0.4 No 0 0 No -22 0.85 Yes 48 36.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68716632 + NM_133509 RAD51B 0 . . . 0.41 79.82 22 4.69 No 57 -4.65 No 0 0 No -21 0.93 Yes 48 29.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190668930 + NM_000534 PMS1 0 . . . 4.37 66.37 28 5.21 No 1 0.4 No 0 0 No -27 0.67 Yes 53 87.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108156032 + NM_000051 ATM 0 . . . 0.93 0 45 6.79 Yes 31 0.56 No 0 0 No -44 0.57 No 31 89.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56813680 + NM_058216 RAD51C 0 . . . 2.43 68.95 26 5 No 16 1.11 Yes 0 0 No -52 0.86 Yes 42 94.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68812672 + NM_133509 RAD51B 0 . . . 4.54 74.06 20 5 No 55 1.53 Yes 0 0 No -20 0.44 No 51 76.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68496447 + NM_133509 RAD51B 0 . . . 1.32 65.76 18 4.9 No 64 0.43 No 0 0 No -44 0.76 Yes 12 76.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68536034 + NM_133509 RAD51B 0 . . . 3.6 79.34 25 6.32 Yes 11 -3.06 No 0 0 No -24 0.83 Yes 13 20.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69082781 + NM_133509 RAD51B 0 . . . 2.81 74.35 17 4.8 No 70 0.95 Yes 0 0 No -16 0.44 No 23 70.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810775 + NM_004360 CDH1 0 . . . 2.54 75.37 9 3.87 No 8 0.94 Yes 0 0 No -28 0.45 No 50 94.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75511335 - NM_001040108 MLH3 0 . . . 0.57 0 25 6.48 Yes 28 0.61 No 0 0 No -24 0.27 No 46 84.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215614182 - NM_000465 BARD1 0 . . . 3.12 66.51 18 4.9 No 28 -2.06 No 0 0 No -54 0.7 Yes 50 64.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108121203 + NM_000051 ATM 0 . . . 5.02 76.49 14 3.97 No 18 0.91 Yes 0 0 No -43 0.88 Yes 40 84.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84405542 - NM_139076 FAM175A 0 . . . 5.75 77.11 16 5.83 Yes 26 0.33 No 0 0 No -27 0.52 No 44 76.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59755039 - NM_032043 BRIP1 0 . . . 1.27 74.97 21 4.76 No 74 0.99 Yes 0 0 No -21 0.63 No 53 87.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75510790 - NM_001040108 MLH3 0 . . . 1.48 84.41 27 5.2 No 11 0.22 No 0 0 No -26 0.77 Yes 47 80.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56791426 + NM_058216 RAD51C 0 . . . 5.84 81.57 12 5.2 No 8 0.64 No 0 0 No -20 0.86 Yes 44 71.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68958823 + NM_133509 RAD51B 0 . . . 2.95 87.03 22 5.19 No 61 1.06 Yes 0 0 No -21 0.65 No 43 70.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215669316 - NM_000465 BARD1 0 . . . 0.83 0 24 6.32 Yes 1 0.45 No 0 0 No -23 0.59 No 50 78.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48005389 + NM_000179 MSH6 0 . . . 5.63 77.35 21 5.62 Yes 56 0.71 No 0 0 No -25 0.51 No 51 63.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84387498 - NM_139076 FAM175A 0 . . . 5.19 81.09 37 5.3 No 73 0.46 No 0 0 No -21 0.6 No 43 89.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68471412 + NM_133509 RAD51B 0 . . . 2.85 76.68 15 6.36 Yes 73 0.36 No 0 0 No -28 0.44 No 43 51.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1223475 + NM_000455 STK11 0 . . . 0.83 0 22 5.18 No 52 0.52 No 0 0 No -21 0.82 Yes 44 34.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68316380 + NM_133509 RAD51B 0 . . . 6.76 73.95 38 5.14 No 67 1.08 Yes 0 0 No -27 0.49 No 46 63.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94156694 - NM_005591 MRE11 0 . . . 0.5 75.61 16 4.06 No NA NA NA 0 0 No -16 0.51 No 17 24.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69122647 + NM_133509 RAD51B 0 . . . 1 78.45 27 5.74 Yes 0 1.22 Yes 0 0 No -26 0.95 Yes 21 42.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90944336 - NM_002485 NBN 0 . . . 2.98 82.92 12 5.29 No 8 -2.5 No 0 0 No -21 0.42 No 43 60.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131904611 + NM_005732 RAD50 0 . . . 7.03 85.05 17 5.57 Yes 62 -3.7 No 0 0 No -24 0.73 Yes 45 38.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94165531 - NM_005591 MRE11 0 . . . 0.18 0 17 5.03 No 10 1.37 Yes 0 0 No -30 0.29 No 48 55.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108180095 + NM_000051 ATM 0 . . . 1.65 76.1 33 5.66 Yes 17 0.24 No 0 0 No -32 0.83 Yes 46 44.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89659338 + NM_000314 PTEN 0 . . . 7.76 83.83 17 4.47 No 34 0.71 No 0 0 No -16 0.84 Yes 48 79.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47750244 + NM_000251 MSH2 0 . . . 1.91 79.38 17 4.47 No 10 0.8 Yes 0 0 No -16 0.89 Yes 48 86.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21970901 - NM_000077 CDKN2A 0 . . . 0.32 0 21 5.2 No 24 -0.88 No 0 0 No -20 0.29 No 58 29.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68852803 + NM_004360 CDH1 0 . . . 5.33 93.95 27 6.31 Yes 3 0.58 No 0 0 No -26 0.86 Yes 55 17.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47733017 + NM_000251 MSH2 0 . . . 4.7 85.22 33 5.66 Yes 65 0.74 No 0 0 No -57 0.28 No 46 66.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152374196 - NM_005431 XRCC2 0 . . . 5.99 76.57 22 5.06 No 21 1.55 Yes 0 0 No -19 0.57 No 37 88.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68512811 + NM_133509 RAD51B 0 . . . 0.16 0 43 5.34 No 24 -1.58 No 0 0 No -21 0.72 Yes 61 36.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68389061 + NM_133509 RAD51B 0 . . . 3.52 69 16 4 No 51 0.67 No 0 0 No -25 0.55 No 39 70.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68292710 + NM_133509 RAD51B 0 . . . 1.75 68.34 20 5.8 Yes 23 1.46 Yes 0 0 No -19 0.29 No 40 59.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89635019 + NM_000314 PTEN 0 . . . 1.35 66.47 37 4.39 No 66 1.5 Yes 0 0 No -36 0.5 No 55 52.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47652503 + NM_000251 MSH2 0 . . . 0.27 63.12 25 5.68 Yes 39 0.69 No 0 0 No -24 0.54 No 20 49.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68680482 + NM_133509 RAD51B 0 . . . 3.98 75.11 24 5.29 No 53 0.57 No 0 0 No -21 0.84 Yes 40 62.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47646814 + NM_000251 MSH2 0 . . . 2.87 67.09 17 5.57 Yes 74 0.47 No 0 0 No -16 0.75 Yes 42 73.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41000735 + NM_001164269 RAD51 0 . . . 6.89 81.4 51 6.38 Yes 69 1.24 Yes 0 0 No -30 0.72 Yes 43 80.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190707198 + NM_000534 PMS1 0 . . . 0.69 72.33 19 4.99 No 65 0.85 Yes 0 0 No -25 0.58 No 47 57.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131970140 + NM_005732 RAD50 0 . . . 3.26 74.32 13 3.97 No -3 0.57 No 0 0 No -19 0.56 No 48 82.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47662195 + NM_000251 MSH2 0 . . . 0.45 0 21 5.07 No 44 0.92 Yes 0 0 No -20 0.55 No 41 65.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68498819 + NM_133509 RAD51B 0 . . . 3.28 82.74 16 5.3 No 42 0.66 No 0 0 No -27 0.75 Yes 38 81.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7584399 - NM_000546 TP53 0 . . . 1.63 70.26 35 10.19 Yes -2 0.62 No 0 0 No -25 0.44 No 46 49.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59923151 - NM_032043 BRIP1 0 . . . 5.11 78.53 12 3.37 No 35 1.12 Yes 0 0 No -15 0.38 No 38 60.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131949499 + NM_005732 RAD50 0 . . . 1.54 77.77 38 6.32 Yes 33 1.15 Yes 0 0 No -35 0.62 No 25 41.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89718190 + NM_000314 PTEN 0 . . . 4.71 87.46 35 6.31 Yes 58 1.38 Yes 0 0 No -34 0.55 No 44 20.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68678191 + NM_133509 RAD51B 0 . . . 1.66 73.3 21 5.2 No 68 0.31 No 0 0 No -20 0.62 No 43 46.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104163033 - NM_001100119 XRCC3 0 . . . 0.46 73.45 26 5.1 No 70 2.39 Yes 0 0 No -25 0.87 Yes 21 48.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48034115 + NM_000179 MSH6 0 . . . 12.33 90.4 16 5.83 Yes 12 1.5 Yes 0 0 No -27 0.65 No 46 72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32889081 + NM_000059 BRCA2 0 . . . 2.11 69.79 41 6.79 Yes 1 0.05 No 0 0 No -28 0.56 No 46 62.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68916650 + NM_133509 RAD51B 0 . . . 1.6 69.08 35 5.83 Yes 72 1.36 Yes 0 0 No -48 0.69 Yes 42 95.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68734431 + NM_133509 RAD51B 0 . . . 9 82.2 33 6.86 Yes 10 1.38 Yes 0 0 No -32 0.68 Yes 37 76.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108146833 + NM_000051 ATM 0 . . . 3.32 79.88 15 6.25 Yes 17 1.79 Yes 0 0 No -26 0.23 No 41 87.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21976415 - NM_000077 CDKN2A 0 . . . 6.28 76.45 13 4.8 No 67 0.82 Yes 0 0 No -21 0.59 No 44 65.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89669447 + NM_000314 PTEN 0 . . . 3.56 0 41 6.35 Yes 3 -1.9 No 0 0 No -24 0.38 No 44 69.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131936588 + NM_005732 RAD50 0 . . . 2.68 73.93 36 4.83 No 27 0.69 No 0 0 No -25 0.74 Yes 42 59.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32908078 + NM_000059 BRCA2 0 . . . 7.39 74.25 22 5.56 Yes 61 1 Yes 0 0 No -27 0.57 No 46 83.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32969793 + NM_000059 BRCA2 0 . . . 2.99 78.82 20 7.14 Yes 61 0.09 No 0 0 No -19 0.74 Yes 51 59.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59921753 - NM_032043 BRIP1 0 . . . 3.99 82.03 25 4.48 No 2 1.43 Yes 0 0 No -24 0.88 Yes 20 92.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68878829 + NM_133509 RAD51B 0 . . . 7.23 85.25 17 6.08 Yes 10 0.49 No 0 0 No -16 0.77 Yes 48 68.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90943885 - NM_002485 NBN 0 . . . 8.61 80.38 16 4.94 No 44 1.13 Yes 0 0 No -20 0.84 Yes 43 88.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68782134 + NM_004360 CDH1 0 . . . 1.61 86.9 22 7.28 Yes 33 1.43 Yes 0 0 No -21 0.83 Yes 50 63.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59864894 - NM_032043 BRIP1 0 . . . 7.51 86.85 46 6.36 Yes 14 0.1 No 0 0 No -25 0.52 No 44 60.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75514722 - NM_001040108 MLH3 0 . . . 0.28 56.96 17 5.5 No 70 -5.7 No 0 0 No -36 0.63 No 36 39.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215627185 - NM_000465 BARD1 0 . . . 4.63 70.15 17 5.57 Yes 12 0.13 No 0 0 No -16 0.72 Yes 45 65.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29099302 - NM_001005735 CHEK2 0 . . . 7.33 70.82 14 6.34 Yes 28 -3.57 No 0 0 No -26 0.62 No 36 57.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68421075 + NM_133509 RAD51B 0 . . . 6.67 74.2 26 3.3 No 20 0.99 Yes 0 0 No -29 0.45 No 50 77.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69111434 + NM_133509 RAD51B 0 . . . 2.46 61.91 29 5.29 No 34 0.98 Yes 0 0 No -21 0.46 No 46 53.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68718107 + NM_133509 RAD51B 0 . . . 7.19 86.16 22 5 No 42 0.4 No 0 0 No -21 0.88 Yes 52 41.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108208389 + NM_000051 ATM 0 . . . 7.12 77.01 15 4.47 No 0 1.46 Yes 0 0 No -54 0.66 No 42 42.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59824007 - NM_032043 BRIP1 0 . . . 3.94 73.72 23 5.3 No 13 1.21 Yes 0 0 No -22 0.86 Yes 45 86.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68770318 + NM_133509 RAD51B 0 . . . 0.19 83.28 26 5.2 No -1 0.65 No 0 0 No -25 0.78 Yes 44 78.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41275256 - NM_007294 BRCA1 0 . . . 0.42 63.4 17 7.26 Yes 18 0.02 No 0 0 No -16 0.67 Yes 42 53.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152351429 - NM_005431 XRCC2 0 . . . 3.33 62.22 51 6.73 Yes 26 1.63 Yes 0 0 No -22 0.41 No 44 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23647265 - NM_024675 PALB2 0 . . . 2.15 72.01 28 5.2 No 14 0.86 Yes 0 0 No -62 0.36 No 48 61.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41025146 + NM_001164269 RAD51 0 . . . 2.79 68.34 25 5.2 No 23 1.57 Yes 0 0 No -24 0.94 Yes 45 59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108108282 + NM_000051 ATM 0 . . . 0.01 79.42 20 4.01 No 43 2.13 Yes 0 0 No -24 0.32 No 48 73.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68497781 + NM_133509 RAD51B 0 . . . 0.59 66.91 37 6.96 Yes 55 0.13 No 0 0 No -32 0.57 No 51 53.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108123432 + NM_000051 ATM 0 . . . 3.23 77.68 28 6.63 Yes 63 0.53 No 0 0 No -27 0.89 Yes 49 48.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6039928 - NM_000535 PMS2 0 . . . 3.5 84.25 17 4.8 No -3 0.01 No 0 0 No -18 0.62 No 49 93.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6030978 - NM_000535 PMS2 0 . . . 2.93 0 27 6.4 Yes 6 0.59 No 0 0 No -26 0.64 No 52 55.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47805045 + NM_000251 MSH2 0 . . . 3.41 66.52 114 10.02 Yes 10 0.05 No 0 0 No -25 0.63 No 48 81.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29138946 - NM_001005735 CHEK2 0 . . . 7.63 86.82 26 5.57 Yes 68 1.95 Yes 0 0 No -24 0.53 No 41 75.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94164481 - NM_005591 MRE11 0 . . . 2.75 78.19 27 4.14 No 6 0.16 No 0 0 No -26 0.86 Yes 47 61.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68949626 + NM_133509 RAD51B 0 . . . 3.9 70.99 18 5.11 No 56 -2.23 No 0 0 No -28 0.76 Yes 24 40.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68562509 + NM_133509 RAD51B 0 . . . 1.87 69.77 28 5.83 Yes 69 -4.08 No 0 0 No -27 0.87 Yes 47 27.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68822586 + NM_133509 RAD51B 0 . . . 0.93 68.17 29 5.83 Yes 35 0.25 No 0 0 No -28 0.89 Yes 54 26.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68876957 + NM_133509 RAD51B 0 . . . 9.7 90.24 14 5.22 No 9 1.19 Yes 0 0 No -19 0.39 No 49 54.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37086163 + NM_000249 MLH1 0 . . . 0.43 76.63 15 3.49 No 51 -4.54 No 0 0 No -20 0.43 No 47 34.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94171663 - NM_005591 MRE11 0 . . . 2.36 75.77 27 5.57 Yes 50 0.69 No 0 0 No -24 0.57 No 39 48.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89622626 + NM_000314 PTEN 0 . . . 2.41 76.6 30 6.92 Yes 36 -2.12 No 0 0 No -29 0.93 Yes 50 58.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90997867 - NM_002485 NBN 0 . . . 2.3 84.41 23 5.38 No 18 1.41 Yes 0 0 No -23 0.84 Yes 41 56.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68694305 + NM_133509 RAD51B 0 . . . 5.82 76.92 38 5.94 Yes 61 0.75 No 0 0 No -25 0.89 Yes 49 49.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89677269 + NM_000314 PTEN 0 . . . 2.41 81.79 53 8.33 Yes 53 0.98 Yes 0 0 No -27 0.44 No 48 78.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29138889 - NM_001005735 CHEK2 0 . . . 4.16 72.13 27 5.1 No 74 0.79 Yes 0 0 No -26 0.94 Yes 49 48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90974944 - NM_002485 NBN 0 . . . 10.4 75.87 25 6.7 Yes 42 1.61 Yes 0 0 No -24 0.76 Yes 46 55.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152374563 - NM_005431 XRCC2 0 . . . 3.47 65.89 21 5.2 No 47 0.64 No 0 0 No -20 0.54 No 42 54.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68589432 + NM_133509 RAD51B 0 . . . 3.23 80.98 46 8.87 Yes 36 0.2 No 0 0 No -23 0.43 No 35 88.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59802242 - NM_032043 BRIP1 0 . . . 3.25 71.86 18 7 Yes 34 1.48 Yes 0 0 No -17 0.53 No 24 65.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41204695 - NM_007294 BRCA1 0 . . . 1.69 0 19 5.45 No 59 1.42 Yes 0 0 No -40 0.45 No 40 72.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108158777 + NM_000051 ATM 0 . . . 11.05 88.45 28 5.74 Yes 38 0.46 No 0 0 No -27 0.42 No 49 55.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104177813 - NM_001100119 XRCC3 0 . . . 1.14 63.82 27 5.2 No 60 -5.19 No 0 0 No -26 0.75 Yes 50 38.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23634318 - NM_024675 PALB2 0 . . . 0.32 60.29 29 5.94 Yes 0 0.18 No 0 0 No -28 0.52 No 39 36.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75506917 - NM_001040108 MLH3 0 . . . 1.69 80.37 21 5.09 No 11 1.64 Yes 0 0 No -20 0.53 No 47 87.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69021816 + NM_133509 RAD51B 0 . . . 0.55 77.34 19 4.8 No 11 1.63 Yes 0 0 No -18 0.6 No 47 69.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152359467 - NM_005431 XRCC2 0 . . . 6.76 75.89 22 4.8 No 34 0.91 Yes 0 0 No -21 0.88 Yes 49 71.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41196665 - NM_007294 BRCA1 0 . . . 6.46 80.37 17 5.66 Yes 27 1.34 Yes 0 0 No -30 0.48 No 45 78.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69119609 + NM_133509 RAD51B 0 . . . 0.52 0 26 6.15 Yes 9 0.84 Yes 0 0 No -25 0.81 Yes 41 78.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68785296 + NM_133509 RAD51B 0 . . . 2.44 68.36 12 5.66 Yes 36 1.16 Yes 0 0 No -30 0.32 No 48 88.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94192549 - NM_005591 MRE11 0 . . . 1.55 0 14 5.38 No 57 -4.73 No 0 0 No -23 0.66 No 56 43.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152373914 - NM_005431 XRCC2 0 . . . 2.02 84.41 17 5.83 Yes 48 -1.61 No 0 0 No -28 0.54 No 39 73.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59891217 - NM_032043 BRIP1 0 . . . 0.69 74.58 31 6.7 Yes 55 0.92 Yes 0 0 No -30 0.8 Yes 52 49.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89715398 + NM_000314 PTEN 0 . . . 4.67 79.41 65 8.59 Yes 73 -3.2 No 0 0 No -26 0.46 No 51 61.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59834580 - NM_032043 BRIP1 0 . . . 1.76 0 27 5.2 No 26 0.6 No 0 0 No -50 0.73 Yes 32 93.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68543170 + NM_133509 RAD51B 0 . . . 1.57 76.34 25 5.47 No 9 0.21 No 0 0 No -28 0.57 No 49 79.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59820564 - NM_032043 BRIP1 0 . . . 4.85 74.75 34 6.11 Yes 48 0.31 No 0 0 No -22 0.69 Yes 43 34.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68476978 + NM_133509 RAD51B 0 . . . 2.34 68.71 23 5.74 Yes 62 0.76 No 0 0 No -23 0.75 Yes 43 57.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40993744 + NM_001164269 RAD51 0 . . . 1.92 58.58 29 5.79 Yes 48 1.72 Yes 0 0 No -28 0.8 Yes 44 42.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68353658 + NM_133509 RAD51B 0 . . . 4.46 80.88 13 5.1 No 19 0.4 No 0 0 No -19 0.34 No 43 83.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190664576 + NM_000534 PMS1 0 . . . 1 70.21 26 5.23 No 72 0.12 No 0 0 No -28 0.55 No 42 55.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68822397 + NM_004360 CDH1 0 . . . 4.06 0 23 4.89 No 37 1.37 Yes 0 0 No -22 0.73 Yes 43 87.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47641120 + NM_000251 MSH2 0 . . . 1.23 80 9 3.87 No 46 0.7 No 0 0 No -51 0.72 Yes 31 86.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69094404 + NM_133509 RAD51B 0 . . . 1.65 69.75 28 5.83 Yes 76 1.51 Yes 0 0 No -27 0.63 No 42 54.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69011834 + NM_133509 RAD51B 0 . . . 2.98 64.97 38 6.11 Yes -3 0 No 0 0 No -33 0.78 Yes 44 38.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69009859 + NM_133509 RAD51B 0 . . . 5.51 83.88 16 6.2 Yes 4 0.57 No 0 0 No -21 0.81 Yes 46 58.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89686145 + NM_000314 PTEN 0 . . . 3.15 82.97 31 6.52 Yes 56 0.78 Yes 0 0 No -30 0.76 Yes 48 66.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68536547 + NM_133509 RAD51B 0 . . . 0.31 67.47 32 4.43 No 36 0.77 No 0 0 No -19 0.45 No 22 82.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69087148 + NM_133509 RAD51B 0 . . . 0.72 70.6 18 3.87 No 62 2.12 Yes 0 0 No -22 0.89 Yes 25 66.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68838279 + NM_004360 CDH1 0 . . . 2.46 71.02 49 7.17 Yes 21 1.71 Yes 0 0 No -28 0.55 No 37 85.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105177369 + NM_021930 RINT1 0 . . . 6.51 73.05 15 4.58 No 6 0.53 No 0 0 No -20 0.71 Yes 44 53.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29115722 - NM_001005735 CHEK2 0 . . . 5.53 77.75 17 4.8 No 16 0.7 No 0 0 No -44 0.74 Yes 42 47.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131924684 + NM_005732 RAD50 0 . . . 0.21 0 21 4.98 No 34 0.29 No 0 0 No -23 0.55 No 41 74.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69146608 + NM_133509 RAD51B 0 . . . 4.03 78.91 27 5.97 Yes 44 1.34 Yes 0 0 No -23 0.78 Yes 51 57.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23645930 - NM_024675 PALB2 0 . . . 2.05 86.79 17 4 No 0 1.41 Yes 0 0 No -22 0.87 Yes 58 28.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190668221 + NM_000534 PMS1 0 . . . 6.32 72.75 28 4.69 No 43 0.68 No 0 0 No -40 0.41 No 34 56.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190730335 + NM_000534 PMS1 0 . . . 4.97 75.09 25 6.24 Yes 31 0.82 Yes 0 0 No -24 0.95 Yes 41 41.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68446339 + NM_133509 RAD51B 0 . . . 5.57 86.78 15 5.67 Yes 49 1.56 Yes 0 0 No -31 0.46 No 51 63.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68718918 + NM_133509 RAD51B 0 . . . 4.25 67.03 29 4.19 No 76 -6.57 No 0 0 No -24 0.58 No 49 84.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131947054 + NM_005732 RAD50 0 . . . 2.38 80.22 22 4.75 No 67 -4.96 No 0 0 No -21 0.84 Yes 53 63.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32914026 + NM_000059 BRCA2 0 . . . 4.01 74.56 18 4.46 No 40 0.43 No 0 0 No -18 0.72 Yes 33 36.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69123216 + NM_133509 RAD51B 0 . . . 4.27 79.61 112 12.06 Yes 63 -2.92 No 0 0 No -20 0.58 No 50 30.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047034 + NM_000249 MLH1 0 . . . 6.25 74.39 28 6.09 Yes -2 0.48 No 0 0 No -27 0.66 No 33 62.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68828629 + NM_133509 RAD51B 0 . . . 0.21 71.85 26 5.66 Yes -4 1.33 Yes 0 0 No -25 0.68 Yes 53 44.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108208155 + NM_000051 ATM 0 . . . 3.03 66.26 24 6.71 Yes 76 -2.58 No 0 0 No -23 0.78 Yes 44 51.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89666094 + NM_000314 PTEN 0 . . . 7.5 71.95 26 5.48 No 54 1.56 Yes 0 0 No -25 0.69 Yes 41 78.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84404391 - NM_139076 FAM175A 0 . . . 0.46 68.72 15 5.39 No 66 0.29 No 0 0 No -28 0.25 No 44 86.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108097217 + NM_000051 ATM 0 . . . 2.25 73.42 33 6.04 Yes 66 -6.2 No 0 0 No -32 0.65 No 44 69.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6026320 - NM_000535 PMS2 0 . . . 0.46 83 24 5.48 No 20 1.07 Yes 0 0 No -23 0.58 No 38 48.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48026833 + NM_000179 MSH6 0 . . . 0.18 0 21 4.57 No 15 0.97 Yes 0 0 No -20 0.94 Yes 50 94.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48005534 + NM_000179 MSH6 0 . . . 9.78 88.08 43 6.78 Yes 57 0.98 Yes 0 0 No -34 0.37 No 50 73.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89637517 + NM_000314 PTEN 0 . . . 3.03 75.63 50 6.68 Yes 72 -4.58 No 0 0 No -49 0.58 No 46 79.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23615716 - NM_024675 PALB2 0 . . . 5.73 75.26 17 4.69 No 27 1.53 Yes 0 0 No -22 0.42 No 44 58.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190717267 + NM_000534 PMS1 0 . . . 2.01 74.36 32 6.84 Yes 40 -3.95 No 0 0 No -31 0.44 No 49 72.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23618189 - NM_024675 PALB2 0 . . . 2.97 69.25 29 5.66 Yes 72 -4.9 No 0 0 No -28 0.73 Yes 43 50.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37053129 + NM_000249 MLH1 0 . . . 3.99 79.1 26 6.32 Yes 15 0.68 No 0 0 No -25 0.89 Yes 49 84.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105184926 + NM_021930 RINT1 0 . . . 4.96 87.85 21 4.99 No 57 1.55 Yes 0 0 No -20 0.86 Yes 16 72.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68417497 + NM_133509 RAD51B 0 . . . 7.61 77.39 34 6.66 Yes 14 1.5 Yes 0 0 No -34 0.49 No 44 93.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68819434 + NM_133509 RAD51B 0 . . . 2.37 71.96 21 5.42 No 24 0.27 No 0 0 No -28 0.55 No 34 58.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94159660 - NM_005591 MRE11 0 . . . 5.17 0 13 5 No 51 1.48 Yes 0 0 No -18 0.53 No 29 94.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90987723 - NM_002485 NBN 0 . . . 5.15 77.54 27 5.74 Yes 54 1.55 Yes 0 0 No -36 0.57 No 43 33.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32975098 + NM_000059 BRCA2 0 . . . 4.73 75.47 26 5.51 No 23 0.01 No 0 0 No -25 0.69 Yes 35 56.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32930705 + NM_000059 BRCA2 0 . . . 0.34 74.28 23 5.19 No NA NA NA 0 0 No -23 0.46 No 42 58.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89641251 + NM_000314 PTEN 0 . . . 7.14 71.88 17 6.1 Yes 50 1 Yes 0 0 No -16 0.81 Yes 38 60.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59811457 - NM_032043 BRIP1 0 . . . 2.03 64.7 16 5.48 No 62 0.09 No 0 0 No -24 0.56 No 51 57.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56792308 + NM_058216 RAD51C 0 . . . 6.88 73.89 17 5.29 No 70 0.23 No 0 0 No -21 0.44 No 45 51.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68802629 + NM_004360 CDH1 0 . . . 1.18 65.31 17 4.82 No 58 0.33 No 0 0 No -16 0.48 No 45 47.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68368939 + NM_133509 RAD51B 0 . . . 1.9 62.75 44 6.7 Yes 70 0.78 Yes 0 0 No -27 0.54 No 44 79.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41275071 - NM_007294 BRCA1 0 . . . 4.86 83 36 4.45 No 17 1.41 Yes 0 0 No -20 0.51 No 41 95.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215592510 - NM_000465 BARD1 0 . . . 5.11 70.04 24 4.01 No 21 0.3 No 0 0 No -24 0.42 No 37 46.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68721953 + NM_133509 RAD51B 0 . . . 4.4 74.45 9 5.47 No 42 0.51 No 0 0 No -23 0.63 No 42 78.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90993317 - NM_002485 NBN 0 . . . 0.58 70.77 25 6.67 Yes 25 1.08 Yes 0 0 No -24 0.52 No 33 88.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68564749 + NM_133509 RAD51B 0 . . . 8.12 77.13 20 4.95 No 8 1.27 Yes 0 0 No -19 0.36 No 50 83.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69080577 + NM_133509 RAD51B 0 . . . 1.53 0 23 4.61 No 60 0.38 No 0 0 No -25 0.5 No 45 83.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108092487 + NM_000051 ATM 0 . . . 9.53 97.85 15 4.58 No 39 0.57 No 0 0 No -20 0.71 Yes 48 57.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867880 - NM_032043 BRIP1 0 . . . 4.35 84.06 21 6.71 Yes 68 -2.36 No 0 0 No -20 0.82 Yes 43 55.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89703551 + NM_000314 PTEN 0 . . . 2.02 72.38 17 5.65 Yes 76 -5.44 No 0 0 No -51 0.32 No 44 53.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59870143 - NM_032043 BRIP1 0 . . . 7.74 79.85 18 4.8 No 58 0.46 No 0 0 No -17 0.46 No 47 69.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68867475 + NM_004360 CDH1 0 . . . 7.84 80.96 21 6.29 Yes 9 -0.22 No 0 0 No -20 0.87 Yes 49 87.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47690615 + NM_000251 MSH2 0 . . . 5 83.21 45 10.52 Yes 24 1.11 Yes 0 0 No -26 0.5 No 47 43.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47799995 + NM_000251 MSH2 0 . . . 6.48 79.71 31 6 Yes 75 0.33 No 0 0 No -30 0.8 Yes 50 69.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105197359 + NM_021930 RINT1 0 . . . 1.52 0 19 4.56 No 21 0.24 No 0 0 No -22 0.73 Yes 43 34.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47746274 + NM_000251 MSH2 0 . . . 1.03 0 19 5.56 Yes 35 2.05 Yes 0 0 No -26 0.64 No 49 47.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68911017 + NM_133509 RAD51B 0 . . . 2.47 73.37 20 6.39 Yes 12 0.91 Yes 0 0 No -22 0.33 No 46 82.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69016963 + NM_133509 RAD51B 0 . . . 3.39 73.19 32 4.12 No -1 0.32 No 0 0 No -31 0.64 No 45 54.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68806070 + NM_133509 RAD51B 0 . . . 1.32 59.9 57 7.8 Yes 35 0.79 Yes 0 0 No -19 0.38 No 33 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59759686 - NM_032043 BRIP1 0 . . . 5.66 81.07 25 4.9 No 57 0.94 Yes 0 0 No -24 0.32 No 49 86.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47736677 + NM_000251 MSH2 0 . . . 1.97 77.66 25 5.57 Yes 68 -3.18 No 0 0 No -25 0.61 No 54 22.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68980358 + NM_133509 RAD51B 0 . . . 3.64 72.2 25 5.29 No 40 1.02 Yes 0 0 No -24 0.88 Yes 48 55.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94183846 - NM_005591 MRE11 0 . . . 4.52 75.82 25 4.63 No 69 1.16 Yes 0 0 No -24 0.42 No 43 93.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59757315 - NM_032043 BRIP1 0 . . . 1.82 0 15 4.55 No 56 0.56 No 0 0 No -39 0.72 Yes 60 65.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68326774 + NM_133509 RAD51B 0 . . . 7 83.82 17 4.64 No 59 1.19 Yes 0 0 No -22 0.87 Yes 43 64.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68357231 + NM_133509 RAD51B 0 . . . 4.2 76.15 19 4.47 No 57 1.14 Yes 0 0 No -18 0.75 Yes 16 62.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68405140 + NM_133509 RAD51B 0 . . . 3.35 77.57 20 5.1 No 37 0.97 Yes 0 0 No -19 0.32 No 49 52.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69132656 + NM_133509 RAD51B 0 . . . 2.37 71.77 72 7.06 Yes 22 0.06 No 0 0 No -31 0.81 Yes 49 44.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56788566 + NM_058216 RAD51C 0 . . . 8.87 87.31 22 5.85 Yes 76 0.67 No 0 0 No -29 0.58 No 47 79.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37087384 + NM_000249 MLH1 0 . . . 2.24 80.12 30 5.74 Yes 7 1.02 Yes 0 0 No -30 0.48 No 51 70.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89634369 + NM_000314 PTEN 0 . . . 4.44 75.69 25 5.48 No 9 0.09 No 0 0 No -24 0.91 Yes 41 77.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68985956 + NM_133509 RAD51B 0 . . . 2.02 65.05 42 4.57 No 64 -1.75 No 0 0 No -26 0.8 Yes 37 36.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68943657 + NM_133509 RAD51B 0 . . . 9.23 85.83 24 5.39 No 35 0.89 Yes 0 0 No -23 0.85 Yes 47 73.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94223137 - NM_005591 MRE11 0 . . . 0.57 0 29 5.29 No 73 -3.68 No 0 0 No -25 0.42 No 36 83.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68573785 + NM_133509 RAD51B 0 . . . 3.18 0 20 5.56 Yes 43 1.14 Yes 0 0 No -32 0.33 No 28 67.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1204091 + NM_000455 STK11 0 . . . 0.14 84.22 28 5.83 Yes 39 1.44 Yes 0 0 No -30 0.54 No 51 36.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68703088 + NM_133509 RAD51B 0 . . . 2.81 78.06 25 5.39 No 30 0.73 No 0 0 No -22 0.71 Yes 17 31.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68552712 + NM_133509 RAD51B 0 . . . 7.49 85.51 18 4.98 No 20 0.27 No 0 0 No -25 0.46 No 38 85.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131981400 + NM_005732 RAD50 0 . . . 1.78 84.69 45 5.47 No 37 -3.74 No 0 0 No -31 0.58 No 49 43.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190663193 + NM_000534 PMS1 0 . . . 2.65 63.61 26 6.62 Yes 22 0.4 No 0 0 No -25 0.91 Yes 36 49.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68754431 + NM_133509 RAD51B 0 . . . 1.65 85.17 39 6.16 Yes 13 0.77 Yes 0 0 No -38 0.78 Yes 45 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40994233 + NM_001164269 RAD51 0 . . . 3.15 80.37 26 5.91 Yes 11 1.64 Yes 0 0 No -25 0.91 Yes 47 87.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47762049 + NM_000251 MSH2 0 . . . 2.44 64.92 31 5.44 No 55 0.65 No 0 0 No -30 0.87 Yes 43 59.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41269434 - NM_007294 BRCA1 0 . . . 6.17 79.69 27 7.09 Yes 48 0.36 No 0 0 No -26 0.94 Yes 44 72.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68541856 + NM_133509 RAD51B 0 . . . 0.18 70.52 29 4.44 No -4 0.67 No 0 0 No -21 0.59 No 62 18.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68793262 + NM_133509 RAD51B 0 . . . 1.78 0 21 4.75 No 59 -3.6 No 0 0 No -20 0.66 No 46 30.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56803907 + NM_058216 RAD51C 0 . . . 0.14 63.38 23 5.19 No NA NA NA 0 0 No -22 0.74 Yes 45 54.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68630764 + NM_133509 RAD51B 0 . . . 3.93 69.33 24 5.29 No 24 0.31 No 0 0 No -23 0.7 Yes 34 73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37074367 + NM_000249 MLH1 0 . . . 6.53 85.04 38 6.39 Yes 4 1.52 Yes 0 0 No -26 0.45 No 54 52.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47651422 + NM_000251 MSH2 0 . . . 0.19 74.02 21 4.98 No 53 1.06 Yes 0 0 No -20 0.77 Yes 49 63.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131926332 + NM_005732 RAD50 0 . . . 8.83 83.67 10 4.8 No 33 0.34 No 0 0 No -24 0.16 No 38 71.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37041427 + NM_000249 MLH1 0 . . . 0.98 0 23 3.95 No 24 0.5 No 0 0 No -25 0.48 No 34 90.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6020224 - NM_000535 PMS2 0 . . . 5.31 73.96 33 7.74 Yes 7 1.03 Yes 0 0 No -32 0.57 No 51 82.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108189500 + NM_000051 ATM 0 . . . 1.04 61.61 24 6.2 Yes 10 0.35 No 0 0 No -32 0.32 No 42 47.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68323110 + NM_133509 RAD51B 0 . . . 10.17 80.93 18 4.9 No 29 1.11 Yes 0 0 No -17 0.28 No 29 91.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68425201 + NM_133509 RAD51B 0 . . . 3.16 81.53 17 4.01 No 37 -2.44 No 0 0 No -16 0.69 Yes 48 61.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23642185 - NM_024675 PALB2 0 . . . 0.83 68.37 20 4.4 No 55 1.42 Yes 0 0 No -58 0.74 Yes 40 90.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108234911 + NM_000051 ATM 0 . . . 6.44 78.9 21 6.8 Yes 15 0.8 Yes 0 0 No -31 0.78 Yes 43 57.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68743060 + NM_133509 RAD51B 0 . . . 6.78 75.43 17 6.86 Yes 26 1.28 Yes 0 0 No -27 0.45 No 44 76.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56773114 + NM_058216 RAD51C 0 . . . 2.91 67.91 29 5.91 Yes 55 -3.71 No 0 0 No -28 0.75 Yes 53 48.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59814678 - NM_032043 BRIP1 0 . . . 5.45 93.18 37 5.21 No 8 0.66 No 0 0 No -28 0.55 No 50 61.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68572435 + NM_133509 RAD51B 0 . . . 1.89 62.86 29 5.56 Yes 40 0.34 No 0 0 No -28 0.68 Yes 59 31.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68784144 + NM_133509 RAD51B 0 . . . 6.96 79.13 36 5.7 Yes 44 0.11 No 0 0 No -36 0.57 No 48 84.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47662505 + NM_000251 MSH2 0 . . . 2.7 77.22 14 4.47 No 32 1.13 Yes 0 0 No -30 0.54 No 42 50.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47771017 + NM_000251 MSH2 0 . . . 1.18 74.39 13 4.71 No 48 0.42 No 0 0 No -22 0.71 Yes 18 55.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21979851 - NM_000077 CDKN2A 0 . . . 0.57 0 28 5.38 No 65 0.54 No 0 0 No -27 0.7 Yes 45 40.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68844518 + NM_133509 RAD51B 0 . . . 5.45 89.43 19 6.08 Yes 28 1.17 Yes 0 0 No -29 0.58 No 49 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68849281 + NM_133509 RAD51B 0 . . . 1.71 67.02 15 6.13 Yes 13 0.04 No 0 0 No -31 0.76 Yes 50 60.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68471957 + NM_133509 RAD51B 0 . . . 0.01 82.39 44 6.39 Yes 9 1.03 Yes 0 0 No -22 0.55 No 49 90.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104183487 - NM_001100119 XRCC3 0 . . . 5.66 73.54 16 4.69 No 37 -2.41 No 0 0 No -24 0.25 No 44 85.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131928938 + NM_005732 RAD50 0 . . . 6.09 88.89 23 4.93 No 46 0.88 Yes 0 0 No -19 0.38 No 39 85.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68346433 + NM_133509 RAD51B 0 . . . 3.16 71.35 21 5.74 Yes -3 0.83 Yes 0 0 No -27 0.48 No 33 57.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59895910 - NM_032043 BRIP1 0 . . . 4.78 80.56 28 5.38 No 45 1.12 Yes 0 0 No -27 0.85 Yes 28 79.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131943000 + NM_005732 RAD50 0 . . . 2.02 72.55 30 5.23 No -4 0.38 No 0 0 No -29 0.65 No 49 75.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1213379 + NM_000455 STK11 0 . . . 2.79 0 49 7.07 Yes 66 0.94 Yes 0 0 No -48 0.81 Yes 43 56.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48024858 + NM_000179 MSH6 0 . . . 9.73 93.95 25 6.29 Yes 5 0.87 Yes 0 0 No -24 0.74 Yes 53 92.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68370988 + NM_133509 RAD51B 0 . . . 2.72 66.17 30 5.45 No 52 0.61 No 0 0 No -23 0.83 Yes 46 89.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33428007 - NM_002878 RAD51D 0 . . . 0.26 66.08 32 5.54 No 58 2.3 Yes 0 0 No -42 0.63 No 46 56.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94217898 - NM_005591 MRE11 0 . . . 0.19 78.19 15 4.18 No 34 0.64 No 0 0 No -9 0.29 No 24 92.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37051887 + NM_000249 MLH1 0 . . . 7.71 84.9 10 4.51 No 30 0.69 No 0 0 No -23 0.65 No 42 86.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68964418 + NM_133509 RAD51B 0 . . . 9.08 79.44 23 5.2 No 26 0.96 Yes 0 0 No -22 0.91 Yes 42 54.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69133622 + NM_133509 RAD51B 0 . . . 3.01 67.61 25 4.92 No 70 -2.75 No 0 0 No -24 0.68 Yes 50 49.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59801657 - NM_032043 BRIP1 0 . . . 4.29 73.05 23 4.95 No 64 0.25 No 0 0 No -22 0.82 Yes 45 94.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29121603 - NM_001005735 CHEK2 0 . . . 1.91 0 46 6.78 Yes 13 0.88 Yes 0 0 No -33 0.83 Yes 58 39.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90966426 - NM_002485 NBN 0 . . . 0.03 62.91 19 5 No 6 -1.97 No 0 0 No -27 0.59 No 34 67.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68457118 + NM_133509 RAD51B 0 . . . 4.85 74.81 17 5.74 Yes 6 0.43 No 0 0 No -23 0.64 No 52 90.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90995488 - NM_002485 NBN 0 . . . 3.9 81.23 25 4.18 No 6 1.31 Yes 0 0 No -24 0.74 Yes 41 89.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68654713 + NM_133509 RAD51B 0 . . . 3.6 85.02 55 5.35 No 4 1.05 Yes 0 0 No -59 0.47 No 54 65.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69014249 + NM_133509 RAD51B 0 . . . 4.79 79.9 32 7.87 Yes -3 1.09 Yes 0 0 No -31 0.84 Yes 51 47.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152371964 - NM_005431 XRCC2 0 . . . 6.25 81.13 25 5.27 No 74 1.07 Yes 0 0 No -22 0.67 Yes 45 78.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68821056 + NM_004360 CDH1 0 . . . 6.96 86.16 23 4.85 No 22 0.96 Yes 0 0 No -22 0.69 Yes 46 54.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68996367 + NM_133509 RAD51B 0 . . . 2.99 74.57 25 5.39 No 36 0.38 No 0 0 No -22 0.73 Yes 45 74.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190663222 + NM_000534 PMS1 0 . . . 6.07 87.88 27 5.36 No 51 0.42 No 0 0 No -26 0.8 Yes 40 74.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68985217 + NM_133509 RAD51B 0 . . . 0.9 56.01 32 5.56 Yes 75 0.25 No 0 0 No -35 0.72 Yes 44 62.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75494472 - NM_001040108 MLH3 0 . . . 6.31 76.02 15 5.74 Yes 47 0.86 Yes 0 0 No -28 0.34 No 51 64.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89728171 + NM_000314 PTEN 0 . . . 7.38 79.72 16 3.62 No 16 -2.82 No 0 0 No -18 0.52 No 36 71.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68314178 + NM_133509 RAD51B 0 . . . 2.5 0 35 10.09 Yes 24 0.43 No 0 0 No -34 0.82 Yes 47 47.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41008421 + NM_001164269 RAD51 0 . . . 7.59 91.13 18 4.42 No 61 0.79 Yes 0 0 No -21 0.91 Yes 43 64.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131962354 + NM_005732 RAD50 0 . . . 1.32 70.92 19 4.88 No 71 0.18 No 0 0 No -18 0.72 Yes 34 28.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68433939 + NM_133509 RAD51B 0 . . . 9.39 90.85 24 5.63 Yes 9 0.33 No 0 0 No -23 0.86 Yes 46 60.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48021978 + NM_000179 MSH6 0 . . . 3.89 84.17 19 4.01 No 57 1.15 Yes 0 0 No -18 0.63 No 44 66.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7565593 - NM_000546 TP53 0 . . . 2.39 77.96 39 6.42 Yes 4 1.67 Yes 0 0 No -22 0.59 No 54 87.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23613221 - NM_024675 PALB2 0 . . . 0.05 76.73 28 5.81 Yes 39 -0.81 No 0 0 No -31 0.47 No 54 23.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68705258 + NM_133509 RAD51B 0 . . . 1.46 75.16 15 4.58 No 28 1.26 Yes 0 0 No -18 0.76 Yes 48 90.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215639898 - NM_000465 BARD1 0 . . . 4.25 79.42 21 5.66 Yes 69 -5.29 No 0 0 No -20 0.7 Yes 52 35.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152343896 - NM_005431 XRCC2 0 . . . 2.3 75.11 14 4.73 No 30 -2.95 No 0 0 No -28 0.68 Yes 45 36.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68638060 + NM_133509 RAD51B 0 . . . 3.52 80.56 29 5.93 Yes 3 0.81 Yes 0 0 No -28 0.89 Yes 13 56.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47667067 + NM_000251 MSH2 0 . . . 4.45 86.43 43 6 Yes 29 0.94 Yes 0 0 No -26 0.49 No 47 55.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47715285 + NM_000251 MSH2 0 . . . 6.92 85.81 20 4.88 No 20 1.84 Yes 0 0 No -19 0.32 No 38 93.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41253174 - NM_007294 BRCA1 0 . . . 2.26 78.92 21 5.2 No 15 0.7 No 0 0 No -28 0.61 No 43 88.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68339144 + NM_133509 RAD51B 0 . . . 0.58 67.2 11 4.12 No 70 -4.52 No 0 0 No -23 0.72 Yes 27 41.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68517218 + NM_133509 RAD51B 0 . . . 5.14 85.9 20 5.42 No 24 0.28 No 0 0 No -24 0.79 Yes 49 48.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69097620 + NM_133509 RAD51B 0 . . . 3.18 70.04 47 6.66 Yes 47 1.01 Yes 0 0 No -28 0.53 No 41 53.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48017509 + NM_000179 MSH6 0 . . . 2.7 78.06 24 4.9 No 71 -4.56 No 0 0 No -23 0.71 Yes 43 46.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21967657 - NM_000077 CDKN2A 0 . . . 7.27 74.94 30 6.32 Yes 14 1.77 Yes 0 0 No -33 0.45 No 44 96.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69070570 + NM_133509 RAD51B 0 . . . 4.25 77.77 31 5.48 No 38 -1.01 No 0 0 No -30 0.46 No 29 75.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59832966 - NM_032043 BRIP1 0 . . . 4.23 68.3 21 4.9 No 40 1.45 Yes 0 0 No -20 0.86 Yes 31 93.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68988549 + NM_133509 RAD51B 0 . . . 3.1 76.31 26 6.05 Yes -2 0.37 No 0 0 No -25 0.71 Yes 45 65.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190683534 + NM_000534 PMS1 0 . . . 4.84 62.35 17 4.8 No 18 0.42 No 0 0 No -39 0.58 No 40 83.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69137507 + NM_133509 RAD51B 0 . . . 4.21 79.35 25 5.1 No 75 1.06 Yes 0 0 No -24 0.52 No 45 37.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68799660 + NM_004360 CDH1 0 . . . 3.3 70.86 30 5.43 No 65 1.85 Yes 0 0 No -29 0.75 Yes 47 61.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89698136 + NM_000314 PTEN 0 . . . 7.4 87.31 32 7.07 Yes 61 0.2 No 0 0 No -35 0.61 No 48 88.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47677068 + NM_000251 MSH2 0 . . . 6 87.94 28 5.38 No 6 0.4 No 0 0 No -27 0.56 No 51 83.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29130370 - NM_001005735 CHEK2 0 . . . 2.62 79.98 38 6.46 Yes 6 0.56 No 0 0 No -37 0.54 No 43 46.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41001834 + NM_001164269 RAD51 0 . . . 3.28 71.09 43 8.69 Yes 22 0.86 Yes 0 0 No -34 0.51 No 41 82.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68792266 + NM_133509 RAD51B 0 . . . 7.67 84.5 68 7.83 Yes 8 1.23 Yes 0 0 No -36 0.75 Yes 50 41.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7581548 - NM_000546 TP53 0 . . . 0.83 74.23 23 5.86 Yes 4 0.15 No 0 0 No -26 0.56 No 54 82.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68805907 + NM_133509 RAD51B 0 . . . 2.54 68.84 16 6 Yes 68 1.49 Yes 0 0 No -46 0.55 No 43 84.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131901361 + NM_005732 RAD50 0 . . . 5.08 83.15 37 6 Yes 2 1.37 Yes 0 0 No -25 0.59 No 50 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59935154 - NM_032043 BRIP1 0 . . . 5.06 73.45 23 3.66 No 69 0.03 No 0 0 No -22 0.76 Yes 36 54.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68319246 + NM_133509 RAD51B 0 . . . 2.34 69.78 23 5.39 No 31 0.47 No 0 0 No -22 0.42 No 49 57.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68991169 + NM_133509 RAD51B 0 . . . 0.57 65.08 13 4.36 No 20 1.25 Yes 0 0 No -26 0.43 No 55 56.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59888202 - NM_032043 BRIP1 0 . . . 0.61 61.73 36 8.66 Yes 16 0.3 No 0 0 No -35 0.88 Yes 44 60.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29090560 - NM_001005735 CHEK2 0 . . . 5.7 82.31 27 5.1 No 39 0.45 No 0 0 No -19 0.33 No 43 88.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41270316 - NM_007294 BRCA1 0 . . . 3.88 74.37 23 4.83 No 8 0 No 0 0 No -22 0.74 Yes 50 75.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59885038 - NM_032043 BRIP1 0 . . . 6.39 75.35 16 5.29 No 15 0.72 No 0 0 No -53 0.46 No 43 92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68346702 + NM_133509 RAD51B 0 . . . 7.15 83.35 9 3.87 No -1 0.58 No 0 0 No -35 0.64 No 45 80.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89684207 + NM_000314 PTEN 0 . . . 6.92 87.28 18 4.86 No 71 0.65 No 0 0 No -33 0.47 No 46 78.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69013658 + NM_133509 RAD51B 0 . . . 2.39 0 42 5.38 No 60 -3.89 No 0 0 No -35 0.78 Yes 50 42.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131978438 + NM_005732 RAD50 0 . . . 2.68 77.49 19 4.56 No -3 -1.87 No 0 0 No -30 0.56 No 42 92.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59859501 - NM_032043 BRIP1 0 . . . 2.41 68.34 22 5.29 No 21 1.7 Yes 0 0 No -22 0.8 Yes 37 64.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68693051 + NM_133509 RAD51B 0 . . . 3.42 75.81 14 5.2 No 7 0.85 Yes 0 0 No -20 0.82 Yes 51 46.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69051712 + NM_133509 RAD51B 0 . . . 0.99 0 17 3.81 No 9 0.88 Yes 0 0 No -20 0.74 Yes 38 53.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32951240 + NM_000059 BRCA2 0 . . . 7.54 84.5 13 4.58 No 15 0.63 No 0 0 No -19 0.48 No 43 61.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90961969 - NM_002485 NBN 0 . . . 3.28 64.79 18 6.93 Yes 68 0.76 No 0 0 No -17 0.51 No 41 87.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7592262 - NM_000546 TP53 0 . . . 2.38 87.15 36 4.3 No 35 -0.56 No 0 0 No -30 0.46 No 50 65.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68852204 + NM_133509 RAD51B 0 . . . 7.66 86.59 32 6 Yes 8 1.41 Yes 0 0 No -31 0.75 Yes 50 86.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190653931 + NM_000534 PMS1 0 . . . 2.82 74.84 11 4.12 No 39 0.83 Yes 0 0 No -28 0.85 Yes 45 78.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89701547 + NM_000314 PTEN 0 . . . 6.54 83.93 29 5.45 No 2 0.76 No 0 0 No -28 0.77 Yes 48 72.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131895978 + NM_005732 RAD50 0 . . . 5.37 77.87 36 7.55 Yes 26 0.87 Yes 0 0 No -35 0.75 Yes 37 38.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131971286 + NM_005732 RAD50 0 . . . 4.02 73.86 11 4.54 No 66 1.13 Yes 0 0 No -22 0.36 No 51 62.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68786515 + NM_004360 CDH1 0 . . . 2.93 0 17 4.69 No 21 0.47 No 0 0 No -24 0.61 No 37 94.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6017582 - NM_000535 PMS2 0 . . . 5.19 83.54 46 7.55 Yes 9 1.14 Yes 0 0 No -45 0.75 Yes 49 87.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68485875 + NM_133509 RAD51B 0 . . . 3.21 63.56 34 4.15 No -4 0.85 Yes 0 0 No -22 0.47 No 50 48.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69103651 + NM_133509 RAD51B 0 . . . 2.68 62.21 14 4.47 No 5 1.71 Yes 0 0 No -32 0.33 No 53 76.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68826020 + NM_133509 RAD51B 0 . . . 6.06 83.1 19 4.42 No 7 0.88 Yes 0 0 No -18 0.62 No 38 72.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47744493 + NM_000251 MSH2 0 . . . 0.24 64.28 17 6.08 Yes 73 0.84 Yes 0 0 No -16 0.68 Yes 46 41.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89707400 + NM_000314 PTEN 0 . . . 0.09 74.68 60 8.79 Yes 4 0.41 No 0 0 No -59 0.59 No 54 79.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59866866 - NM_032043 BRIP1 0 . . . 7.53 67.35 28 3.91 No 35 0.22 No 0 0 No -27 0.57 No 37 94.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68794355 + NM_133509 RAD51B 0 . . . 3.49 65.46 15 5.74 Yes 48 0.52 No 0 0 No -51 0.59 No 44 91.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68799118 + NM_004360 CDH1 0 . . . 3.98 83.57 17 6.93 Yes 23 0.64 No 0 0 No -27 0.4 No 35 73.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68678866 + NM_133509 RAD51B 0 . . . 2.69 76.87 21 5.92 Yes 15 0.84 Yes 0 0 No -26 0.64 No 43 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68317589 + NM_133509 RAD51B 0 . . . 5.59 76.19 33 6.92 Yes 3 0.81 Yes 0 0 No -32 0.79 Yes 55 69.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69112404 + NM_133509 RAD51B 0 . . . 0.72 0 23 5.67 Yes 23 1.09 Yes 0 0 No -22 0.71 Yes 35 71.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59930133 - NM_032043 BRIP1 0 . . . 6.52 71.98 19 4.89 No 74 1.16 Yes 0 0 No -25 0.66 No 33 86.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68432977 + NM_133509 RAD51B 0 . . . 5.58 72.35 17 6.63 Yes 15 0.97 Yes 0 0 No -16 0.46 No 43 96.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68776547 + NM_133509 RAD51B 0 . . . 2.9 77.02 42 8.67 Yes 63 -3.61 No 0 0 No -42 0.39 No 45 38.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47692343 + NM_000251 MSH2 0 . . . 4.44 88.55 32 5.45 No 57 0.85 Yes 0 0 No -32 0.58 No 18 50.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68574570 + NM_133509 RAD51B 0 . . . 1.74 65.72 18 4.89 No 61 -4.73 No 0 0 No -17 0.6 No 52 30.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68797491 + NM_133509 RAD51B 0 . . . 2.87 0 16 5.04 No 25 0.02 No 0 0 No -45 0.56 No 37 44.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6031845 - NM_000535 PMS2 0 . . . 4.19 82.81 16 4.62 No 8 0.66 No 0 0 No -45 0.52 No 47 54.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131913178 + NM_005732 RAD50 0 . . . 5.03 70.18 15 4.93 No 76 0.64 No 0 0 No -23 0.92 Yes 45 50.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108192626 + NM_000051 ATM 0 . . . 5.37 70.09 62 4.77 No 21 0.09 No 0 0 No -25 0.33 No 37 59.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90960558 - NM_002485 NBN 0 . . . 0.53 69.8 13 5.61 Yes 48 0.35 No 0 0 No -25 0.9 Yes 48 18.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131931185 + NM_005732 RAD50 0 . . . 2.63 78.67 17 5.82 Yes 3 0.28 No 0 0 No -24 0.63 No 41 42.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104174679 - NM_001100119 XRCC3 0 . . . 1.99 71.89 22 5.29 No 62 -0.33 No 0 0 No -21 0.7 Yes 32 81.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37083010 + NM_000249 MLH1 0 . . . 3.23 0 16 5.04 No 3 0.15 No 0 0 No -20 0.64 No 51 80.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68856419 + NM_133509 RAD51B 0 . . . 4.93 67.9 28 6.82 Yes -4 0.11 No 0 0 No -27 0.73 Yes 41 67.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89641182 + NM_000314 PTEN 0 . . . 2.64 64.87 35 4.59 No 60 1.91 Yes 0 0 No -25 0.38 No 47 87.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89714504 + NM_000314 PTEN 0 . . . 0.39 66.06 18 5.74 Yes 58 0.87 Yes 0 0 No -26 0.84 Yes 46 66.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190684294 + NM_000534 PMS1 0 . . . 5.53 79 24 5.82 Yes 24 1.53 Yes 0 0 No -28 0.3 No 38 64.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68530500 + NM_133509 RAD51B 0 . . . 7.06 83.11 31 4.07 No 49 0.15 No 0 0 No -30 0.44 No 52 72.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89690470 + NM_000314 PTEN 0 . . . 4.8 70.21 22 4.9 No 24 -3.03 No 0 0 No -22 0.49 No 46 59.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29117069 - NM_001005735 CHEK2 0 . . . 3.46 77.16 43 4.89 No -2 0.55 No 0 0 No -29 0.46 No 45 82.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190699130 + NM_000534 PMS1 0 . . . 3.31 77.1 24 5.43 No 34 0.66 No 0 0 No -23 0.59 No 42 95.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190682005 + NM_000534 PMS1 0 . . . 0.01 67.36 33 6.24 Yes 20 0.78 Yes 0 0 No -32 0.8 Yes 38 70.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68685008 + NM_133509 RAD51B 0 . . . 4.82 70.41 15 5.2 No 15 1.97 Yes 0 0 No -20 0.58 No 43 90.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68689840 + NM_133509 RAD51B 0 . . . 7.53 81.7 20 5.83 Yes 75 1.05 Yes 0 0 No -19 0.79 Yes 45 96.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23621182 - NM_024675 PALB2 0 . . . 1.64 76.63 26 4.5 No 38 -3.27 No 0 0 No -21 0.42 No 50 87.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47689762 + NM_000251 MSH2 0 . . . 0.77 64.38 12 4.37 No -1 0.1 No 0 0 No -21 0.58 No 45 51.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6049997 - NM_000535 PMS2 0 . . . 2.09 64.04 27 5.05 No 48 -4.97 No 0 0 No -24 0.52 No 56 33.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68333931 + NM_133509 RAD51B 0 . . . 10.47 94.2 34 4.9 No 14 1.19 Yes 0 0 No -33 0.66 No 44 86.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90946679 - NM_002485 NBN 0 . . . 7.81 87.12 18 5.53 No 17 1.01 Yes 0 0 No -24 0.81 Yes 45 93.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68666112 + NM_133509 RAD51B 0 . . . 4.66 77.3 13 5.85 Yes 42 0.97 Yes 0 0 No -29 0.77 Yes 52 54.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37073550 + NM_000249 MLH1 0 . . . 1.14 72.41 19 4.84 No 39 1.35 Yes 0 0 No -18 0.41 No 40 47.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152364713 - NM_005431 XRCC2 0 . . . 6.04 82.18 28 6.4 Yes 6 1.09 Yes 0 0 No -27 0.76 Yes 52 29.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89644398 + NM_000314 PTEN 0 . . . 1.34 59.88 21 5 No 65 -6.38 No 0 0 No -34 0.46 No 49 37.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1208131 + NM_000455 STK11 0 . . . 4.85 69.05 21 9.3 Yes 42 0.52 No 0 0 No -20 0.85 Yes 16 82.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21982654 - NM_000077 CDKN2A 0 . . . 10.08 95.1 14 4.9 No 18 1.13 Yes 0 0 No -23 0.56 No 40 87.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59930822 - NM_032043 BRIP1 0 . . . 1.9 64.44 23 4.39 No 40 1.36 Yes 0 0 No -28 0.84 Yes 42 21.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68637371 + NM_133509 RAD51B 0 . . . 5.33 78.77 47 7.38 Yes 76 1.21 Yes 0 0 No -46 0.54 No 48 66.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75488455 - NM_001040108 MLH3 0 . . . 6.76 84.97 23 6.41 Yes 3 1.27 Yes 0 0 No -22 0.68 Yes 43 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68622509 + NM_133509 RAD51B 0 . . . 0.48 71.19 19 5.81 Yes 61 -5.92 No 0 0 No -31 0.28 No 51 36.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68904141 + NM_133509 RAD51B 0 . . . 3.83 78.88 29 5.02 No 34 1.05 Yes 0 0 No -28 0.68 Yes 39 76.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68683800 + NM_133509 RAD51B 0 . . . 7.49 79.65 22 5.29 No 1 1 Yes 0 0 No -21 0.71 Yes 33 73.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68942729 + NM_133509 RAD51B 0 . . . 0.87 72.79 22 5.83 Yes 8 0.56 No 0 0 No -21 0.73 Yes 50 57.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68352237 + NM_133509 RAD51B 0 . . . 3.18 82.78 16 5.17 No 44 1.17 Yes 0 0 No -22 0.65 No 40 71.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68691861 + NM_133509 RAD51B 0 . . . 2.84 76.85 21 5.1 No 74 -3.36 No 0 0 No -45 0.4 No 45 53.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68482468 + NM_133509 RAD51B 0 . . . 0.51 71.37 41 5.3 No 44 -4 No 0 0 No -25 0.66 No 50 27.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69109814 + NM_133509 RAD51B 0 . . . 6.2 86.57 22 5.74 Yes 58 0.68 No 0 0 No -21 0.86 Yes 51 49.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45803239 - NM_001048171 MUTYH 0 . . . 0.92 68.17 24 6.02 Yes -4 0.77 No 0 0 No -23 0.68 Yes 50 83.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47650426 + NM_000251 MSH2 0 . . . 4.9 80.64 24 5 No 9 1.22 Yes 0 0 No -24 0.6 No 49 91.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47642807 + NM_000251 MSH2 0 . . . 4.49 82.41 18 5.48 No 51 1.02 Yes 0 0 No -25 0.9 Yes 63 45.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69045354 + NM_133509 RAD51B 0 . . . 3.65 84.4 26 5.39 No 35 1.01 Yes 0 0 No -25 0.8 Yes 50 64.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89722355 + NM_000314 PTEN 0 . . . 0.41 66.85 24 7.07 Yes 39 -3.38 No 0 0 No -23 0.94 Yes 32 54.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1224118 + NM_000455 STK11 0 . . . 6.84 69.82 21 5.55 No 19 0.36 No 0 0 No -20 0.72 Yes 42 76.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68378240 + NM_133509 RAD51B 0 . . . 1.83 83.57 19 4.98 No 56 0.66 No 0 0 No -18 0.76 Yes 16 62.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190695260 + NM_000534 PMS1 0 . . . 3.51 75.47 18 6.42 Yes 57 1.15 Yes 0 0 No -43 0.68 Yes 37 62.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215603706 - NM_000465 BARD1 0 . . . 9.35 85.86 26 5.1 No 7 1.44 Yes 0 0 No -25 0.93 Yes 51 85.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68637963 + NM_133509 RAD51B 0 . . . 3.37 84.13 25 5.99 Yes 73 1.28 Yes 0 0 No -24 0.95 Yes 52 28.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68849460 + NM_004360 CDH1 0 . . . 1.01 71.98 42 6.09 Yes 54 1.1 Yes 0 0 No -20 0.64 No 52 61.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68789602 + NM_004360 CDH1 0 . . . 0.32 68.25 29 5.66 Yes 58 1.33 Yes 0 0 No -29 0.7 Yes 43 49.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68770022 + NM_004360 CDH1 0 . . . 1.1 73.27 23 6.05 Yes 48 1.26 Yes 0 0 No -22 0.31 No 64 28.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68359940 + NM_133509 RAD51B 0 . . . 1.47 71.38 17 4.2 No 74 -4.86 No 0 0 No -22 0.59 No 38 61.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68993526 + NM_133509 RAD51B 0 . . . 2.11 0 32 5.57 Yes 27 1.31 Yes 0 0 No -24 0.37 No 31 74.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108169618 + NM_000051 ATM 0 . . . 3.46 73.01 38 6.3 Yes 44 -3.35 No 0 0 No -23 0.79 Yes 46 57.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68866018 + NM_133509 RAD51B 0 . . . 2.71 81.25 14 7.12 Yes 43 1.32 Yes 0 0 No -18 0.58 No 15 82.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68455579 + NM_133509 RAD51B 0 . . . 2.95 68.15 22 6.85 Yes 73 0.56 No 0 0 No -21 0.97 Yes 39 88.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68416985 + NM_133509 RAD51B 0 . . . 0.67 0 20 5.65 Yes 57 0.5 No 0 0 No -19 0.65 No 45 67.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68878233 + NM_133509 RAD51B 0 . . . 3.16 77.48 22 4.8 No 58 -2.19 No 0 0 No -21 0.96 Yes 48 79.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69077317 + NM_133509 RAD51B 0 . . . 4.72 70.01 15 4.82 No 63 1.23 Yes 0 0 No -26 0.35 No 45 52.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89629356 + NM_000314 PTEN 0 . . . 5.74 68.17 21 5.16 No 0 0.4 No 0 0 No -31 0.92 Yes 43 66.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59829099 - NM_032043 BRIP1 0 . . . 4.88 74 22 5.29 No 57 0.48 No 0 0 No -21 0.34 No 21 77.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94185262 - NM_005591 MRE11 0 . . . 2.23 86.52 57 7.81 Yes 76 1.47 Yes 0 0 No -56 0.51 No 50 80.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41018781 + NM_001164269 RAD51 0 . . . 6.79 73.11 25 6.19 Yes 1 0.9 Yes 0 0 No -25 0.41 No 44 52.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68407427 + NM_133509 RAD51B 0 . . . 5.66 75.15 25 5.08 No 7 0.98 Yes 0 0 No -24 0.81 Yes 47 61.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108103773 + NM_000051 ATM 0 . . . 1.87 80.12 17 5.39 No 6 0.99 Yes 0 0 No -27 0.59 No 52 79.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68589271 + NM_133509 RAD51B 0 . . . 0.13 67.32 23 4.79 No 53 -4.92 No 0 0 No -22 0.49 No 16 18.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59850078 - NM_032043 BRIP1 0 . . . 1.41 84.22 15 5.78 Yes 33 1.13 Yes 0 0 No -30 0.45 No 50 59.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68869785 + NM_004360 CDH1 0 . . . 0.74 76.63 15 5.68 Yes 51 -4.82 No 0 0 No -45 0.34 No 43 40.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68734304 + NM_133509 RAD51B 0 . . . 0.5 68.82 25 6.48 Yes 56 0.16 No 0 0 No -24 0.67 Yes 50 29.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190726869 + NM_000534 PMS1 0 . . . 9.82 87.6 25 7.88 Yes 70 0.99 Yes 0 0 No -24 0.63 No 46 45.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131906417 + NM_005732 RAD50 0 . . . 2.46 75.95 32 5.94 Yes 9 1.03 Yes 0 0 No -31 0.9 Yes 45 40 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68718847 + NM_133509 RAD51B 0 . . . 0.23 0 16 4.69 No 56 0.62 No 0 0 No -22 0.29 No 42 93.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68885364 + NM_133509 RAD51B 0 . . . 0.99 66.49 30 5.48 No 61 -2.36 No 0 0 No -29 0.91 Yes 44 54.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190699267 + NM_000534 PMS1 0 . . . 2.39 66.3 28 5.38 No 6 0.63 No 0 0 No -27 0.54 No 37 47.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108133181 + NM_000051 ATM 0 . . . 4.78 88.36 31 6.71 Yes 8 0.68 No 0 0 No -30 0.96 Yes 50 89.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152358651 - NM_005431 XRCC2 0 . . . 3.28 78.14 25 5.35 No 52 1.18 Yes 0 0 No -13 0.35 No 36 60.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68475241 + NM_133509 RAD51B 0 . . . 7.38 78.9 18 3.6 No 12 0.87 Yes 0 0 No -20 0.27 No 40 41.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68473036 + NM_133509 RAD51B 0 . . . 3.06 77.28 14 5.48 No 34 0.63 No 0 0 No -23 0.91 Yes 38 67.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104163275 - NM_001100119 XRCC3 0 . . . 5.44 88.65 21 5.04 No 34 0.6 No 0 0 No -20 0.62 No 52 34.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215643424 - NM_000465 BARD1 0 . . . 4.63 75.74 21 5.79 Yes 50 0.63 No 0 0 No -27 0.51 No 54 50.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015292 + NM_000179 MSH6 0 . . . 6.08 82.5 15 4.18 No 44 0.65 No 0 0 No -30 0.34 No 48 95.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59849246 - NM_032043 BRIP1 0 . . . 8.11 89.65 29 3.73 No 52 1.47 Yes 0 0 No -25 0.47 No 49 86.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59883993 - NM_032043 BRIP1 0 . . . 2.7 77.09 19 4.76 No 71 -5.15 No 0 0 No -25 0.84 Yes 48 39.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131980646 + NM_005732 RAD50 0 . . . 2.36 79.93 28 5.29 No 6 1.13 Yes 0 0 No -27 0.74 Yes 52 68.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215597422 - NM_000465 BARD1 0 . . . 2.72 73.09 13 5.65 Yes 58 0.73 No 0 0 No -26 0.72 Yes 13 56.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68722221 + NM_133509 RAD51B 0 . . . 0.9 69.53 27 5.2 No 28 1.11 Yes 0 0 No -26 0.67 Yes 54 37.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108222339 + NM_000051 ATM 0 . . . 4.52 78.08 23 5.1 No -3 0.94 Yes 0 0 No -22 0.66 No 34 64.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68915965 + NM_133509 RAD51B 0 . . . 0.48 67.89 39 6.29 Yes 29 0.95 Yes 0 0 No -23 0.27 No 29 39.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37039534 + NM_000249 MLH1 0 . . . 2.96 80.22 30 6.31 Yes 58 -3.88 No 0 0 No -37 0.66 No 55 48.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68833629 + NM_004360 CDH1 0 . . . 1.64 55.07 15 6.08 Yes 17 0.84 Yes 0 0 No -19 0.27 No 41 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59840751 - NM_032043 BRIP1 0 . . . 5.21 86.27 40 6.4 Yes 75 -4.46 No 0 0 No -26 0.32 No 49 77.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69134528 + NM_133509 RAD51B 0 . . . 4.01 82.16 15 5.16 No 39 0.22 No 0 0 No -28 0.36 No 34 76.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68923163 + NM_133509 RAD51B 0 . . . 2.89 78.98 16 4.95 No 75 -5.85 No 0 0 No -20 0.85 Yes 50 38.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47767524 + NM_000251 MSH2 0 . . . 4.58 81.52 36 5.12 No -2 0.76 No 0 0 No -30 0.44 No 45 45.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59870181 - NM_032043 BRIP1 0 . . . 2.98 74.68 18 4.69 No 20 0.47 No 0 0 No -17 0.78 Yes 39 33.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89649205 + NM_000314 PTEN 0 . . . 1.34 69.42 15 4.73 No 12 0.18 No 0 0 No -26 0.52 No 46 89.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89635119 + NM_000314 PTEN 0 . . . 4.41 78.46 15 4.58 No 10 0.11 No 0 0 No -34 0.64 No 39 61.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108226644 + NM_000051 ATM 0 . . . 0.23 0 15 4.38 No 62 -3.43 No 0 0 No -23 0.64 No 52 58.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37083321 + NM_000249 MLH1 0 . . . 8.13 85.74 22 4.03 No 20 0.6 No 0 0 No -22 0.76 Yes 48 70.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40999689 + NM_001164269 RAD51 0 . . . 2.24 80.12 37 7.54 Yes 7 1.02 Yes 0 0 No -36 0.74 Yes 51 79.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108092522 + NM_000051 ATM 0 . . . 6.07 83.06 20 5.09 No 74 0.54 No 0 0 No -19 0.63 No 47 54.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68664092 + NM_133509 RAD51B 0 . . . 7.41 80.12 26 7.75 Yes 68 1.49 Yes 0 0 No -30 0.7 Yes 29 79.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59906894 - NM_032043 BRIP1 0 . . . 2.86 72.72 25 4.98 No 2 0.56 No 0 0 No -24 0.84 Yes 46 87.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41204940 - NM_007294 BRCA1 0 . . . 1.81 80.22 45 7.04 Yes 58 -3.88 No 0 0 No -16 0.55 No 43 45.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68796563 + NM_004360 CDH1 0 . . . 3.16 79.62 18 4.07 No 69 0.54 No 0 0 No -17 0.83 Yes 54 62.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29126140 - NM_001005735 CHEK2 0 . . . 2.62 68.46 22 6.07 Yes 10 0.61 No 0 0 No -30 0.68 Yes 48 85.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47736576 + NM_000251 MSH2 0 . . . 6.12 84.6 36 4.5 No 63 -3.62 No 0 0 No -30 0.83 Yes 40 73.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21978822 - NM_000077 CDKN2A 0 . . . 2.26 74.11 55 6.19 Yes 75 -6.04 No 0 0 No -26 0.38 No 44 63.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215631069 - NM_000465 BARD1 0 . . . 5.85 82.64 35 6.45 Yes 56 0.62 No 0 0 No -34 0.82 Yes 29 83.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32899796 + NM_000059 BRCA2 0 . . . 4.42 84.22 17 3.5 No 8 1.13 Yes 0 0 No -47 0.74 Yes 50 88.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89653002 + NM_000314 PTEN 0 . . . 1.18 71.6 41 6.46 Yes 1 0.58 No 0 0 No -40 0.61 No 51 48.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89685558 + NM_000314 PTEN 0 . . . 2.19 66.1 29 6.84 Yes 15 0.4 No 0 0 No -28 0.91 Yes 33 55.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152351915 - NM_005431 XRCC2 0 . . . 0.21 0 34 6.09 Yes 15 0.68 No 0 0 No -33 0.58 No 43 44.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68852131 + NM_133509 RAD51B 0 . . . 0.81 77.73 23 5 No 45 0.46 No 0 0 No -22 0.96 Yes 51 76.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68815587 + NM_133509 RAD51B 0 . . . 2.46 76.63 19 4.47 No 15 0.34 No 0 0 No -22 0.36 No 43 67.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6033465 - NM_000535 PMS2 0 . . . 10.08 89.4 35 5.07 No 64 1.29 Yes 0 0 No -27 0.58 No 10 66.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59835650 - NM_032043 BRIP1 0 . . . 8.73 90.76 17 6.26 Yes 58 0.36 No 0 0 No -16 0.58 No 49 55.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68470466 + NM_133509 RAD51B 0 . . . 3.82 77.23 19 6.4 Yes 1 0.41 No 0 0 No -20 0.69 Yes 43 72.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47730473 + NM_000251 MSH2 0 . . . 8.75 87.1 17 4.36 No NA NA NA 0 0 No -27 0.52 No 51 82.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89656993 + NM_000314 PTEN 0 . . . 1.77 74.87 23 6.08 Yes 7 0.93 Yes 0 0 No -22 0.86 Yes 51 67.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90951278 - NM_002485 NBN 0 . . . 0.31 70.61 17 5.92 Yes 24 -3.01 No 0 0 No -31 0.43 No 34 36.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68306594 + NM_133509 RAD51B 0 . . . 1.55 76.63 35 6.08 Yes 64 1.3 Yes 0 0 No -34 0.84 Yes 43 74.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47679517 + NM_000251 MSH2 0 . . . 2.06 68.84 47 6.48 Yes 52 0.7 No 0 0 No -46 0.47 No 48 76.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59838179 - NM_032043 BRIP1 0 . . . 5.17 82.37 33 5.34 No -4 0.43 No 0 0 No -18 0.49 No 44 54.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90987938 - NM_002485 NBN 0 . . . 5.21 74.27 19 3.75 No 30 1.3 Yes 0 0 No -22 0.6 No 44 71.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47759051 + NM_000251 MSH2 0 . . . 5.2 68.32 32 5.8 Yes 31 0.63 No 0 0 No -31 0.55 No 49 90.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68774756 + NM_133509 RAD51B 0 . . . 4.86 73.94 15 5.28 No 22 0.93 Yes 0 0 No -21 0.37 No 32 66.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68428312 + NM_133509 RAD51B 0 . . . 4.31 72.81 21 4.6 No 24 0.39 No 0 0 No -20 0.88 Yes 48 79.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47775208 + NM_000251 MSH2 0 . . . 8.05 84.39 13 5.81 Yes 51 0.35 No 0 0 No -44 0.35 No 37 88.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59882276 - NM_032043 BRIP1 0 . . . 4.17 74.08 41 7.6 Yes 10 0.29 No 0 0 No -27 0.76 Yes 48 71.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68565960 + NM_133509 RAD51B 0 . . . 3.61 67.18 18 4.67 No 76 0.48 No 0 0 No -18 0.41 No 41 63.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47634675 + NM_000251 MSH2 0 . . . 0.04 59.8 30 7.13 Yes 33 -3.04 No 0 0 No -29 0.92 Yes 43 31.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89712927 + NM_000314 PTEN 0 . . . 6.34 88.78 22 3.49 No 6 1.54 Yes 0 0 No -20 0.92 Yes 48 95.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47699615 + NM_000251 MSH2 0 . . . 5.68 75.64 36 6.65 Yes 45 0.42 No 0 0 No -25 0.84 Yes 47 36.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68558748 + NM_133509 RAD51B 0 . . . 7.87 87.91 51 7.89 Yes 72 0.02 No 0 0 No -42 0.5 No 47 75.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108155310 + NM_000051 ATM 0 . . . 1.87 60.82 25 5.13 No 46 0.07 No 0 0 No -25 0.72 Yes 35 69.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69015623 + NM_133509 RAD51B 0 . . . 0.79 0 30 5.38 No 65 2.3 Yes 0 0 No -29 0.77 Yes 38 24.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59889455 - NM_032043 BRIP1 0 . . . 2.94 0 18 4.81 No 27 1.01 Yes 0 0 No -17 0.44 No 42 83.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47777277 + NM_000251 MSH2 0 . . . 0.9 70.84 25 4.68 No 0 0.66 No 0 0 No -22 0.68 Yes 52 48.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68535398 + NM_133509 RAD51B 0 . . . 1.73 80.54 19 5 No 10 0.72 No 0 0 No -24 0.67 Yes 48 81.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40996661 + NM_001164269 RAD51 0 . . . 1.1 61.06 24 5.72 Yes 69 1.53 Yes 0 0 No -23 0.56 No 42 80.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94223821 - NM_005591 MRE11 0 . . . 3.74 70.37 30 5.48 No 64 1.31 Yes 0 0 No -29 0.73 Yes 37 80.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68979782 + NM_133509 RAD51B 0 . . . 0.88 70.22 25 5.25 No 61 0.85 Yes 0 0 No -24 0.31 No 54 16.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69034596 + NM_133509 RAD51B 0 . . . 4.34 68.19 19 4.58 No 63 0.06 No 0 0 No -18 0.74 Yes 42 83.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94198515 - NM_005591 MRE11 0 . . . 2.91 75.34 22 4.8 No 10 0.2 No 0 0 No -21 0.93 Yes 48 49.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69103817 + NM_133509 RAD51B 0 . . . 7.62 94.48 16 4.24 No 72 1.27 Yes 0 0 No -22 0.25 No 45 75.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131952256 + NM_005732 RAD50 0 . . . 6.26 79.96 15 4.74 No 44 0.46 No 0 0 No -23 0.53 No 47 74.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68570433 + NM_133509 RAD51B 0 . . . 1.42 72.72 29 6.31 Yes 13 0.17 No 0 0 No -28 0.78 Yes 45 64.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68775758 + NM_004360 CDH1 0 . . . 3.45 80.12 34 4.76 No 70 0.21 No 0 0 No -19 0.88 Yes 46 66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33427348 - NM_002878 RAD51D 0 . . . 4.52 0 29 5.92 Yes 25 0.86 Yes 0 0 No -28 0.87 Yes 43 68.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33442813 - NM_002878 RAD51D 0 . . . 7.59 87.51 17 3.39 No 8 1.09 Yes 0 0 No -30 0.36 No 50 89.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108188602 + NM_000051 ATM 0 . . . 3.11 75.48 26 7.85 Yes 5 0.82 Yes 0 0 No -25 0.63 No 41 84.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190680944 + NM_000534 PMS1 0 . . . 4.91 79.45 33 6.17 Yes 76 0.61 No 0 0 No -32 0.92 Yes 39 56.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68493090 + NM_133509 RAD51B 0 . . . 1.61 69.86 25 5 No -2 0.44 No 0 0 No -27 0.6 No 50 54.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41237591 - NM_007294 BRCA1 0 . . . 0.89 76.62 29 6.4 Yes 19 -2.19 No 0 0 No -28 0.95 Yes 51 38.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32893047 + NM_000059 BRCA2 0 . . . 7.49 76.88 16 4.48 No 21 1.25 Yes 0 0 No -27 0.79 Yes 37 69.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108227014 + NM_000051 ATM 0 . . . 0.32 74.68 20 5.1 No 62 0.68 No 0 0 No -19 0.78 Yes 54 81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94170110 - NM_005591 MRE11 0 . . . 3.25 81.69 18 4.47 No 62 0.63 No 0 0 No -17 0.33 No 41 54.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68437661 + NM_133509 RAD51B 0 . . . 0.57 58 20 6.86 Yes 73 0.78 Yes 0 0 No -19 0.68 Yes 11 35.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47796791 + NM_000251 MSH2 0 . . . 4.18 67.45 29 5.48 No 73 -4.87 No 0 0 No -12 0.47 No 48 43.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68578233 + NM_133509 RAD51B 0 . . . 2.85 78.36 21 5.74 Yes 54 0.36 No 0 0 No -20 0.78 Yes 37 63.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68544396 + NM_133509 RAD51B 0 . . . 4.18 84.15 23 5.81 Yes 6 0.33 No 0 0 No -22 0.38 No 48 83.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90949406 - NM_002485 NBN 0 . . . 5.18 80.02 22 5.29 No -4 1 Yes 0 0 No -21 0.58 No 52 88.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68402152 + NM_133509 RAD51B 0 . . . 2.93 69.41 41 6.86 Yes 4 -1.14 No 0 0 No -40 0.58 No 49 15.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94219480 - NM_005591 MRE11 0 . . . 3.55 66.33 17 4.8 No 47 0.92 Yes 0 0 No -41 0.75 Yes 43 42.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6029215 - NM_000535 PMS2 0 . . . 3.86 77.82 14 4.46 No 50 -3.21 No 0 0 No -25 0.8 Yes 43 84.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108125424 + NM_000051 ATM 0 . . . 3.52 84.95 39 6.47 Yes 65 2.31 Yes 0 0 No -24 0.65 No 44 57.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108190341 + NM_000051 ATM 0 . . . 6.47 77.02 35 6.07 Yes 60 0.72 No 0 0 No -34 0.53 No 44 91.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131914594 + NM_005732 RAD50 0 . . . 5.2 83.18 17 4.48 No 55 0.68 No 0 0 No -24 0.8 Yes 46 48.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69081359 + NM_133509 RAD51B 0 . . . 8.08 87.36 22 4.72 No 13 1.61 Yes 0 0 No -21 0.8 Yes 45 84.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90992289 - NM_002485 NBN 0 . . . 1.38 71.34 33 7.93 Yes 72 0.73 No 0 0 No -32 0.88 Yes 43 58.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68943363 + NM_133509 RAD51B 0 . . . 3.05 82.06 52 7.05 Yes 72 -5.53 No 0 0 No -36 0.57 No 50 28.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68758493 + NM_133509 RAD51B 0 . . . 4.85 79.57 24 6.99 Yes 75 -2.49 No 0 0 No -23 0.65 No 36 69.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45796896 - NM_001048171 MUTYH 0 . . . 3.69 74.89 20 4.31 No 75 -6.38 No 0 0 No -19 0.84 Yes 45 46.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59813686 - NM_032043 BRIP1 0 . . . 8.84 87.19 24 6.21 Yes 50 0.88 Yes 0 0 No -23 0.84 Yes 42 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47697909 + NM_000251 MSH2 0 . . . 6.68 75.04 13 5 No 45 -3.92 No 0 0 No -30 0.46 No 36 60 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108136009 + NM_000051 ATM 0 . . . 1.75 67.66 13 6.11 Yes 59 -4.44 No 0 0 No -28 0.71 Yes 43 24.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68785002 + NM_004360 CDH1 0 . . . 5.28 71.32 18 4.97 No 51 1.02 Yes 0 0 No -21 0.49 No 49 93.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32971567 + NM_000059 BRCA2 0 . . . 4.55 70.6 15 4.25 No 0 0.27 No 0 0 No -57 0.46 No 51 70.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68603609 + NM_133509 RAD51B 0 . . . 0.28 0 14 5.02 No 74 -6.34 No 0 0 No -25 0.75 Yes 33 37.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131901152 + NM_005732 RAD50 0 . . . 8.23 82.58 24 5.39 No 27 1.96 Yes 0 0 No -23 0.71 Yes 44 49.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32896811 + NM_000059 BRCA2 0 . . . 1.61 66.67 30 5.59 Yes 48 -2.92 No 0 0 No -29 0.57 No 46 83.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47730032 + NM_000251 MSH2 0 . . . 3.4 71.46 37 6.4 Yes 70 0.39 No 0 0 No -26 0.64 No 47 72.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108234164 + NM_000051 ATM 0 . . . 4.35 74.49 17 3.75 No 30 1.42 Yes 0 0 No -25 0.58 No 28 44.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68785729 + NM_004360 CDH1 0 . . . 1.83 0 21 5 No 73 0.8 Yes 0 0 No -20 0.67 Yes 48 51.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94207281 - NM_005591 MRE11 0 . . . 3.49 63.55 10 4 No 37 1.43 Yes 0 0 No -43 0.44 No 47 66.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47677998 + NM_000251 MSH2 0 . . . 6.6 82.76 47 5.66 Yes 67 0.36 No 0 0 No -37 0.63 No 41 76.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41241528 - NM_007294 BRCA1 0 . . . 0.12 65.72 28 3.97 No -3 0.46 No 0 0 No -27 0.7 Yes 39 62.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41244677 - NM_007294 BRCA1 0 . . . 5.5 80.39 19 5.57 Yes 59 -3.47 No 0 0 No -24 0.64 No 49 62.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68674871 + NM_133509 RAD51B 0 . . . 3.59 72.3 24 4.59 No -2 0.16 No 0 0 No -23 0.5 No 47 46.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68804173 + NM_004360 CDH1 0 . . . 3.55 75.9 28 6.83 Yes 9 1.6 Yes 0 0 No -24 0.48 No 49 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69021746 + NM_133509 RAD51B 0 . . . 4.99 85.02 19 5.98 Yes 65 0.44 No 0 0 No -18 0.72 Yes 44 69.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68813285 + NM_004360 CDH1 0 . . . 5.19 78.05 60 8.05 Yes 76 -5.87 No 0 0 No -29 0.91 Yes 49 58.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32970561 + NM_000059 BRCA2 0 . . . 1.91 74.35 10 6.4 Yes 67 -6.44 No 0 0 No -25 0.76 Yes 50 77.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190709121 + NM_000534 PMS1 0 . . . 3.18 77.35 28 4.25 No 8 1.53 Yes 0 0 No -27 0.76 Yes 54 71.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75489852 - NM_001040108 MLH3 0 . . . 0.31 67.08 18 5.38 No 45 0.32 No 0 0 No -17 0.43 No 46 86.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32926904 + NM_000059 BRCA2 0 . . . 1.3 71.21 10 5.2 No 44 0.2 No 0 0 No -24 0.72 Yes 49 44.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105201090 + NM_021930 RINT1 0 . . . 4.02 59.24 19 5.45 No 73 0.71 No 0 0 No -23 0.19 No 39 93.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32962749 + NM_000059 BRCA2 0 . . . 3.22 62.42 27 7.14 Yes 73 0.39 No 0 0 No -26 0.89 Yes 44 92.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47643853 + NM_000251 MSH2 0 . . . 5.2 77.79 20 5.66 Yes 8 0.51 No 0 0 No -19 0.75 Yes 36 52.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079766 + NM_000249 MLH1 0 . . . 3.51 68.79 77 6.46 Yes 50 0.59 No 0 0 No -30 0.78 Yes 41 41.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108116670 + NM_000051 ATM 0 . . . 2.21 84.22 17 4.69 No 76 1.46 Yes 0 0 No -39 0.21 No 50 38.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56793660 + NM_058216 RAD51C 0 . . . 6.21 81.46 24 5.09 No 59 0.62 No 0 0 No -23 0.67 Yes 43 72.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59873049 - NM_032043 BRIP1 0 . . . 0.46 67.61 24 5.1 No 44 -1.7 No 0 0 No -23 0.69 Yes 30 53.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152353200 - NM_005431 XRCC2 0 . . . 4.53 67.52 41 6.6 Yes 43 -3.21 No 0 0 No -40 0.7 Yes 24 34.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108207747 + NM_000051 ATM 0 . . . 7 78.76 20 5.09 No 14 0.91 Yes 0 0 No -19 0.4 No 44 86.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23638969 - NM_024675 PALB2 0 . . . 7.23 80.35 45 7.05 Yes 59 1.19 Yes 0 0 No -30 0.66 No 43 56.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105174223 + NM_021930 RINT1 0 . . . 5.64 85.48 14 5.24 No 46 0.93 Yes 0 0 No -25 0.82 Yes 49 72.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108100569 + NM_000051 ATM 0 . . . 1.08 77.81 30 5.97 Yes 66 1.02 Yes 0 0 No -29 0.92 Yes 49 75.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59784877 - NM_032043 BRIP1 0 . . . 0.82 73.84 15 4.58 No -4 0.61 No 0 0 No -22 0.73 Yes 47 57.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69120134 + NM_133509 RAD51B 0 . . . 0.89 71.39 72 9.96 Yes 30 -2.2 No 0 0 No -45 0.61 No 53 49.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68913685 + NM_133509 RAD51B 0 . . . 0.32 74.68 27 6.03 Yes 75 0.59 No 0 0 No -26 0.88 Yes 36 59.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89700212 + NM_000314 PTEN 0 . . . 2.5 81.55 10 4.79 No 63 -2.54 No 0 0 No -21 0.33 No 31 42.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68867449 + NM_004360 CDH1 0 . . . 0.7 64.81 24 4.3 No 64 -3.5 No 0 0 No -29 0.48 No 52 25.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131912455 + NM_005732 RAD50 0 . . . 8.2 77.6 17 5.29 No 31 1.36 Yes 0 0 No -16 0.71 Yes 46 78.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69149022 + NM_133509 RAD51B 0 . . . 10.5 82.83 32 7.35 Yes 17 0.9 Yes 0 0 No -29 0.65 No 41 63.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41020018 + NM_001164269 RAD51 0 . . . 0.27 59.51 20 5.74 Yes 28 1.7 Yes 0 0 No -26 0.47 No 30 87.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29096106 - NM_001005735 CHEK2 0 . . . 8.51 75.44 18 5.45 No -3 0.87 Yes 0 0 No -23 0.78 Yes 40 40.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59818812 - NM_032043 BRIP1 0 . . . 2.91 68.73 21 5.19 No 4 0.54 No 0 0 No -26 0.63 No 45 38.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68740690 + NM_133509 RAD51B 0 . . . 3.9 72.13 16 5.43 No 5 0.69 No 0 0 No -23 0.77 Yes 46 67.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59910371 - NM_032043 BRIP1 0 . . . 1.24 0 22 4.89 No 41 1.03 Yes 0 0 No -21 0.93 Yes 41 72.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32970052 + NM_000059 BRCA2 0 . . . 2.14 0 28 5.83 Yes 55 1.24 Yes 0 0 No -27 0.67 Yes 50 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68796911 + NM_133509 RAD51B 0 . . . 0.07 73.45 24 5.41 No 53 -1.76 No 0 0 No -28 0.54 No 45 54.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68360936 + NM_133509 RAD51B 0 . . . 3.12 71.22 26 5.25 No 50 1.22 Yes 0 0 No -32 0.57 No 45 72.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190673997 + NM_000534 PMS1 0 . . . 2.27 67.58 14 5.29 No 60 0.13 No 0 0 No -23 0.37 No 39 47.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190651379 + NM_000534 PMS1 0 . . . 1.71 72.04 18 5.97 Yes 8 0.29 No 0 0 No -24 0.59 No 41 77.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215614291 - NM_000465 BARD1 0 . . . 0.33 65.54 25 5.39 No 38 1.78 Yes 0 0 No -22 0.74 Yes 50 45.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190659915 + NM_000534 PMS1 0 . . . 3.99 80.4 14 4.24 No 36 0.69 No 0 0 No -52 0.7 Yes 40 86.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84388207 - NM_139076 FAM175A 0 . . . 4.42 80.71 36 7.79 Yes 12 0.6 No 0 0 No -35 0.59 No 46 82.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68713791 + NM_133509 RAD51B 0 . . . 5.43 81.34 24 5.76 Yes 75 0.54 No 0 0 No -23 0.69 Yes 50 61.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215631171 - NM_000465 BARD1 0 . . . 1.85 72.32 19 5.69 Yes 8 0.55 No 0 0 No -24 0.61 No 54 42.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68772151 + NM_133509 RAD51B 0 . . . 0.77 61.73 28 4.2 No 50 1.05 Yes 0 0 No -27 0.72 Yes 63 42.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47733630 + NM_000251 MSH2 0 . . . 0.14 74.77 23 5.38 No 63 -3.36 No 0 0 No -22 0.9 Yes 52 47.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68926690 + NM_133509 RAD51B 0 . . . 2.28 79.15 21 4.52 No 72 0.86 Yes 0 0 No -24 0.76 Yes 55 70.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23627441 - NM_024675 PALB2 0 . . . 3.82 70.16 32 4.19 No 22 0.56 No 0 0 No -24 0.54 No 36 38.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68663446 + NM_133509 RAD51B 0 . . . 1.03 64.34 22 4.12 No 45 0.89 Yes 0 0 No -21 0.77 Yes 51 39.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108192926 + NM_000051 ATM 0 . . . 3.46 84.95 20 6.39 Yes 73 -0.59 No 0 0 No -19 0.74 Yes 13 18.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94225093 - NM_005591 MRE11 0 . . . 3.67 74.83 27 4.04 No 63 0.21 No 0 0 No -26 0.35 No 41 95.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75508107 - NM_001040108 MLH3 0 . . . 1.46 68.06 32 5.74 Yes 71 1.41 Yes 0 0 No -31 0.82 Yes 48 65.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89699004 + NM_000314 PTEN 0 . . . 2.97 0 29 7.35 Yes 76 -1.15 No 0 0 No -28 0.97 Yes 45 38.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190719052 + NM_000534 PMS1 0 . . . 1.62 58.53 26 4.9 No 64 0.47 No 0 0 No -25 0.8 Yes 52 44.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69107270 + NM_133509 RAD51B 0 . . . 0.09 77.77 12 5.39 No 48 0.11 No 0 0 No -45 0.57 No 43 67.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56809319 + NM_058216 RAD51C 0 . . . 6.75 82.37 25 4.71 No 6 0.65 No 0 0 No -25 0.77 Yes 43 44.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89639844 + NM_000314 PTEN 0 . . . 3.43 79.34 26 4.7 No 69 0.57 No 0 0 No -51 0.66 No 27 89.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68594177 + NM_133509 RAD51B 0 . . . 0.2 70.58 17 4.69 No 37 1.07 Yes 0 0 No -55 0.51 No 21 28.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47692114 + NM_000251 MSH2 0 . . . 4.53 74.35 34 5.5 No 25 0.23 No 0 0 No -29 0.82 Yes 45 73.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59911219 - NM_032043 BRIP1 0 . . . 5.54 79.68 33 6.85 Yes 69 0.33 No 0 0 No -32 0.48 No 10 72.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56801608 + NM_058216 RAD51C 0 . . . 5.8 68.54 33 6.78 Yes 20 1.28 Yes 0 0 No -27 0.38 No 38 96.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47695062 + NM_000251 MSH2 0 . . . 5.33 91.17 39 4.53 No 26 0.3 No 0 0 No -23 0.5 No 49 44.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68973366 + NM_133509 RAD51B 0 . . . 1.5 0 9 4.8 No 64 0.12 No 0 0 No -21 0.57 No 55 34.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68804100 + NM_133509 RAD51B 0 . . . 9.33 89.02 12 4.78 No 1 0.6 No 0 0 No -37 0.5 No 48 74.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37047847 + NM_000249 MLH1 0 . . . 7.96 95.69 23 7.05 Yes 72 0.9 Yes 0 0 No -27 0.69 Yes 49 49.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68398042 + NM_133509 RAD51B 0 . . . 7.13 87.28 15 4.58 No 20 1.31 Yes 0 0 No -57 0.59 No 47 53.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68822431 + NM_004360 CDH1 0 . . . 4.79 73.7 13 4.62 No 71 1.36 Yes 0 0 No -30 0.4 No 43 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59816829 - NM_032043 BRIP1 0 . . . 5.33 75.41 21 3.97 No 60 1.16 Yes 0 0 No -21 0.91 Yes 44 86.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108151545 + NM_000051 ATM 0 . . . 4.05 72.02 30 5.95 Yes 25 1.06 Yes 0 0 No -29 0.52 No 33 84.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68578278 + NM_133509 RAD51B 0 . . . 5.19 67.9 34 6.83 Yes 56 0.14 No 0 0 No -33 0.36 No 37 65.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68365419 + NM_133509 RAD51B 0 . . . 1.6 68.65 25 5.29 No 68 0.62 No 0 0 No -24 0.68 Yes 44 57.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89722657 + NM_000314 PTEN 0 . . . 0.38 72.08 46 6.78 Yes 75 0.57 No 0 0 No -45 0.41 No 50 63.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41273389 - NM_007294 BRCA1 0 . . . 1.94 83 18 4.69 No 36 0.58 No 0 0 No -49 0.45 No 35 72.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84394707 - NM_139076 FAM175A 0 . . . 1.08 61.15 18 4.62 No 70 -5.33 No 0 0 No -39 0.54 No 44 51.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90968066 - NM_002485 NBN 0 . . . 2.63 75.69 12 5.39 No 51 0.01 No 0 0 No -26 0.37 No 49 74.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89639489 + NM_000314 PTEN 0 . . . 3.59 68.51 33 5.3 No 64 -5.2 No 0 0 No -32 0.63 No 42 84.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7569773 - NM_000546 TP53 0 . . . 4.92 79.54 25 5.9 Yes 53 2.34 Yes 0 0 No -24 0.7 Yes 27 74.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68393691 + NM_133509 RAD51B 0 . . . 0.3 66.72 17 5.66 Yes 61 -5.75 No 0 0 No -44 0.5 No 45 54.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69113338 + NM_133509 RAD51B 0 . . . 6.62 78.13 12 4.78 No 25 0.97 Yes 0 0 No -20 0.63 No 48 83.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68974615 + NM_133509 RAD51B 0 . . . 0.33 71.43 23 4.84 No 65 0.37 No 0 0 No -23 0.66 No 36 55.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68629156 + NM_133509 RAD51B 0 . . . 1.29 73.66 41 5.09 No 26 1.01 Yes 0 0 No -38 0.56 No 60 41.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32960161 + NM_000059 BRCA2 0 . . . 0.6 60.98 30 5.72 Yes 59 -4.37 No 0 0 No -29 0.54 No 38 43.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75507517 - NM_001040108 MLH3 0 . . . 1.28 70.65 16 4.29 No -4 1.2 Yes 0 0 No -25 0.45 No 46 48.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89732052 + NM_000314 PTEN 0 . . . 5.32 71.41 18 4.89 No 63 1.34 Yes 0 0 No -17 0.6 No 31 81.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59830021 - NM_032043 BRIP1 0 . . . 3.97 79.36 29 5.16 No 56 0.22 No 0 0 No -28 0.85 Yes 37 39.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68589930 + NM_133509 RAD51B 0 . . . 2.3 84.41 18 3.34 No 39 1.97 Yes 0 0 No -23 0.5 No 19 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41210181 - NM_007294 BRCA1 0 . . . 1.49 0 15 4.02 No 14 1.44 Yes 0 0 No -17 0.42 No 44 81.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37092717 + NM_000249 MLH1 0 . . . 3.6 85.02 27 5.46 No 4 1.2 Yes 0 0 No -26 0.81 Yes 54 56.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1226206 + NM_000455 STK11 0 . . . 5.46 74.94 17 5.89 Yes 57 0.2 No 0 0 No -29 0.66 No 30 48.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29139312 - NM_001005735 CHEK2 0 . . . 6.66 77.27 18 4.44 No 7 0.84 Yes 0 0 No -23 0.31 No 51 79.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84385394 - NM_139076 FAM175A 0 . . . 2.17 78.47 28 6.41 Yes 20 0.64 No 0 0 No -27 0.85 Yes 52 77.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68525084 + NM_133509 RAD51B 0 . . . 0.31 0 26 5.99 Yes 72 1.59 Yes 0 0 No -25 0.78 Yes 37 69.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68863348 + NM_133509 RAD51B 0 . . . 6.49 82.53 40 6.77 Yes 0 0.27 No 0 0 No -39 0.39 No 43 78.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69116447 + NM_133509 RAD51B 0 . . . 1.21 0 15 5.39 No 62 0.05 No 0 0 No -28 0.28 No 50 26.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108191549 + NM_000051 ATM 0 . . . 0.13 68.84 26 4.93 No 58 1.41 Yes 0 0 No -25 0.86 Yes 50 42.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68825396 + NM_133509 RAD51B 0 . . . 7.17 73.9 26 3.97 No 68 -1.64 No 0 0 No -32 0.54 No 44 62.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190717223 + NM_000534 PMS1 0 . . . 5.31 82 26 6.68 Yes 68 0.11 No 0 0 No -37 0.3 No 47 83.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68700564 + NM_133509 RAD51B 0 . . . 3.79 73.89 34 6.83 Yes -1 -1.7 No 0 0 No -33 0.57 No 37 43.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6040700 - NM_000535 PMS2 0 . . . 2.16 58.53 43 5.53 No 54 1.33 Yes 0 0 No -28 0.59 No 37 54.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215674966 - NM_000465 BARD1 0 . . . 1.38 0 22 6.72 Yes 70 -2.99 No 0 0 No -21 0.87 Yes 45 46.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69128349 + NM_133509 RAD51B 0 . . . 1.56 72.44 16 4.37 No 62 -3.1 No 0 0 No -41 0.9 Yes 48 68.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59806853 - NM_032043 BRIP1 0 . . . 0.99 0 23 4.35 No 57 1.59 Yes 0 0 No -22 0.73 Yes 35 96.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94174378 - NM_005591 MRE11 0 . . . 4.93 80.16 23 4.8 No 4 1.03 Yes 0 0 No -21 0.33 No 44 56.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69136419 + NM_133509 RAD51B 0 . . . 3.12 68.55 24 4.03 No 4 -1.16 No 0 0 No -23 0.65 No 45 45.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47642537 + NM_000251 MSH2 0 . . . 7.25 79.07 35 6.4 Yes 37 0.8 Yes 0 0 No -34 0.78 Yes 38 60.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41235637 - NM_007294 BRCA1 0 . . . 0.63 65.97 20 4.8 No 58 0.4 No 0 0 No -19 0.83 Yes 30 91.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68587686 + NM_133509 RAD51B 0 . . . 0.53 61.63 18 3.35 No 63 0.85 Yes 0 0 No -17 0.52 No 32 89.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41260468 - NM_007294 BRCA1 0 . . . 3.34 79.03 18 6 Yes 19 0.77 No 0 0 No -29 0.31 No 52 66.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41233459 - NM_007294 BRCA1 0 . . . 4.04 0 27 4.38 No 59 0.44 No 0 0 No -32 0.6 No 45 63.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75485142 - NM_001040108 MLH3 0 . . . 0.51 0 18 5.83 Yes 8 0.98 Yes 0 0 No -28 0.66 No 50 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68925704 + NM_133509 RAD51B 0 . . . 3.84 0 50 4.51 No 58 1.69 Yes 0 0 No -32 0.51 No 49 82.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40996834 + NM_001164269 RAD51 0 . . . 0.74 74.36 18 6.02 Yes 34 1.27 Yes 0 0 No -23 0.41 No 24 51.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68869282 + NM_004360 CDH1 0 . . . 0.82 66.06 35 7.07 Yes 40 0.52 No 0 0 No -34 0.91 Yes 18 61.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68953387 + NM_133509 RAD51B 0 . . . 6.56 71.85 15 4.36 No 4 2.22 Yes 0 0 No -14 0.64 No 41 83.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59894019 - NM_032043 BRIP1 0 . . . 1.7 65.29 92 8.59 Yes 36 1.38 Yes 0 0 No -36 0.4 No 44 90.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94184682 - NM_005591 MRE11 0 . . . 8.28 83.63 29 5.29 No 9 0.86 Yes 0 0 No -29 0.57 No 34 29.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68513045 + NM_133509 RAD51B 0 . . . 2.72 76.22 26 5.18 No 3 1.73 Yes 0 0 No -25 0.93 Yes 55 39.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59898632 - NM_032043 BRIP1 0 . . . 5.72 77.95 17 5.57 Yes 38 -1.44 No 0 0 No -16 0.53 No 49 63.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69018834 + NM_133509 RAD51B 0 . . . 1.79 67.23 34 5.73 Yes 36 0.09 No 0 0 No -33 0.92 Yes 43 57.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33433368 - NM_002878 RAD51D 0 . . . 6.6 82.15 18 4.4 No 22 0.74 No 0 0 No -23 0.61 No 36 89.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59793495 - NM_032043 BRIP1 0 . . . 0.4 65.14 28 4.26 No 75 0.15 No 0 0 No -27 0.73 Yes 45 72.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47643954 + NM_000251 MSH2 0 . . . 2.36 0 28 5.83 Yes -4 0.37 No 0 0 No -29 0.55 No 54 73.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89666456 + NM_000314 PTEN 0 . . . 4.88 66.66 27 4.7 No 0 0.31 No 0 0 No -22 0.56 No 44 61.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131957089 + NM_005732 RAD50 0 . . . 8.51 71.03 28 5.64 Yes -3 1.23 Yes 0 0 No -31 0.68 Yes 38 69.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29105067 - NM_001005735 CHEK2 0 . . . 2.81 68.64 25 5.1 No 40 1.51 Yes 0 0 No -58 0.62 No 23 95.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23626580 - NM_024675 PALB2 0 . . . 1.5 64.1 18 5.48 No 56 -3.22 No 0 0 No -27 0.48 No 47 49.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69082181 + NM_133509 RAD51B 0 . . . 6.12 86.9 25 6.86 Yes 33 1.24 Yes 0 0 No -24 0.73 Yes 50 95.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56798202 + NM_058216 RAD51C 0 . . . 0.14 60.43 32 5.41 No 50 0.1 No 0 0 No -28 0.4 No 52 87.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68809193 + NM_133509 RAD51B 0 . . . 3.62 84.84 15 4.53 No 7 0.02 No 0 0 No -19 0.33 No 47 63.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68704418 + NM_133509 RAD51B 0 . . . 4.07 77.59 21 5.2 No 28 -3.5 No 0 0 No -20 0.26 No 44 44.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32965512 + NM_000059 BRCA2 0 . . . 2.09 74.65 35 7.15 Yes 75 -5.89 No 0 0 No -34 0.71 Yes 52 60.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190702108 + NM_000534 PMS1 0 . . . 2.15 73.28 35 4.77 No 3 0.82 Yes 0 0 No -27 0.92 Yes 50 82.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215637103 - NM_000465 BARD1 0 . . . 3.61 79.67 17 4.04 No 73 0.61 No 0 0 No -20 0.52 No 52 71.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90987954 - NM_002485 NBN 0 . . . 6.09 75.14 21 5.11 No 14 1.32 Yes 0 0 No -20 0.56 No 44 84.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69134398 + NM_133509 RAD51B 0 . . . 1.24 0 25 5.57 Yes 76 -6.39 No 0 0 No -24 0.38 No 48 86.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47777732 + NM_000251 MSH2 0 . . . 0.7 73.67 42 5.41 No 33 1.15 Yes 0 0 No -30 0.46 No 25 38.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68549440 + NM_133509 RAD51B 0 . . . 9.6 90.79 17 5.57 Yes 4 0.38 No 0 0 No -16 0.81 Yes 42 77.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68692333 + NM_133509 RAD51B 0 . . . 2.17 71.3 33 6.3 Yes 68 0.11 No 0 0 No -25 0.56 No 42 89.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68792672 + NM_004360 CDH1 0 . . . 3.03 75.94 43 6.02 Yes 24 1.18 Yes 0 0 No -24 0.31 No 44 69.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56786650 + NM_058216 RAD51C 0 . . . 1.96 78.07 28 5.39 No 33 1.04 Yes 0 0 No -27 0.64 No 39 52.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190675529 + NM_000534 PMS1 0 . . . 6.63 91.19 27 5.52 No 4 0.8 Yes 0 0 No -30 0.77 Yes 47 81.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68845507 + NM_004360 CDH1 0 . . . 12.15 91.88 29 7.66 Yes 27 1.85 Yes 0 0 No -28 0.86 Yes 31 73.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59829820 - NM_032043 BRIP1 0 . . . 1.19 67.75 38 6.63 Yes 71 0.43 No 0 0 No -37 0.58 No 48 73.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47774573 + NM_000251 MSH2 0 . . . 1.91 73.31 12 5.28 No 68 -4.91 No 0 0 No -22 0.83 Yes 54 38.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37056394 + NM_000249 MLH1 0 . . . 2.58 70.85 27 5.26 No 61 -3.55 No 0 0 No -26 0.8 Yes 44 56.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69016251 + NM_133509 RAD51B 0 . . . 4.42 84.22 38 6.59 Yes 8 1.13 Yes 0 0 No -37 0.44 No 50 87.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68814456 + NM_004360 CDH1 0 . . . 2.56 68.34 29 5.74 Yes 72 1.16 Yes 0 0 No -28 0.9 Yes 35 60.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94157119 - NM_005591 MRE11 0 . . . 0.25 0 16 4.69 No 71 0.4 No 0 0 No -22 0.72 Yes 45 40.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68866919 + NM_133509 RAD51B 0 . . . 6.88 83.26 22 5 No 64 0.61 No 0 0 No -26 0.72 Yes 42 62.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69026228 + NM_133509 RAD51B 0 . . . 0.46 0 28 5.26 No 15 1.57 Yes 0 0 No -27 0.78 Yes 13 29.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94197530 - NM_005591 MRE11 0 . . . 5.55 71.81 21 5.46 No 36 -4.11 No 0 0 No -31 0.62 No 47 72.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69005022 + NM_133509 RAD51B 0 . . . 4.49 88.74 19 5.04 No -2 0.36 No 0 0 No -23 0.77 Yes 50 81.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59838841 - NM_032043 BRIP1 0 . . . 1.3 81.22 33 4.5 No 42 1.54 Yes 0 0 No -22 0.56 No 50 84.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105180657 + NM_021930 RINT1 0 . . . 1.66 0 27 5.2 No 46 1.43 Yes 0 0 No -26 0.9 Yes 12 34.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75479524 - NM_001040108 MLH3 0 . . . 8.93 74.71 26 5.48 No 69 -3.56 No 0 0 No -25 0.8 Yes 38 81.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29112036 - NM_001005735 CHEK2 0 . . . 2.3 75.13 23 4.84 No 64 -3.33 No 0 0 No -22 0.63 No 48 49.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68734100 + NM_133509 RAD51B 0 . . . 3.7 68.49 12 3.59 No 71 -5 No 0 0 No -23 0.89 Yes 41 73.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90959546 - NM_002485 NBN 0 . . . 1.35 68.5 29 5.66 Yes 0 0.08 No 0 0 No -28 0.45 No 47 55.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32943157 + NM_000059 BRCA2 0 . . . 1.96 78.07 16 4.4 No 32 1.19 Yes 0 0 No -51 0.43 No 26 43.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108179968 + NM_000051 ATM 0 . . . 5.14 81.49 10 4.8 No 73 -4.03 No 0 0 No -21 0.58 No 39 48.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94152490 - NM_005591 MRE11 0 . . . 4.02 0 16 4.69 No 25 -2.5 No 0 0 No -15 0.54 No 51 68.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52438701 - NM_004656 BAP1 0 . . . 0.24 75.51 18 5 No 57 -0.16 No 0 0 No -25 0.64 No 56 31.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90974693 - NM_002485 NBN 0 . . . 5.93 76.03 25 5.39 No -3 0.3 No 0 0 No -22 0.79 Yes 49 55.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68979190 + NM_133509 RAD51B 0 . . . 7.83 92.92 14 3.99 No 5 1 Yes 0 0 No -26 0.89 Yes 35 57.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59881343 - NM_032043 BRIP1 0 . . . 4.74 70.68 17 4.8 No 34 0.29 No 0 0 No -38 0.63 No 45 74.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90966762 - NM_002485 NBN 0 . . . 8.54 85.86 49 7.35 Yes 18 1.25 Yes 0 0 No -35 0.59 No 40 95.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59775107 - NM_032043 BRIP1 0 . . . 6.98 81.74 22 5.29 No 3 2.04 Yes 0 0 No -24 0.59 No 46 38.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59803726 - NM_032043 BRIP1 0 . . . 3.18 72.57 21 4.31 No 65 0.26 No 0 0 No -21 0.61 No 50 27.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68861783 + NM_133509 RAD51B 0 . . . 8.26 89 18 5.61 Yes 32 -1.62 No 0 0 No -28 0.74 Yes 39 73.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89683480 + NM_000314 PTEN 0 . . . 3.64 76.51 14 5.39 No 29 1.2 Yes 0 0 No -22 0.52 No 44 65.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68682818 + NM_133509 RAD51B 0 . . . 4.16 74.09 17 8.51 Yes 8 0.02 No 0 0 No -16 0.73 Yes 49 45.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89684120 + NM_000314 PTEN 0 . . . 2.68 72.39 21 5.2 No 60 0.16 No 0 0 No -58 0.73 Yes 45 38.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89657352 + NM_000314 PTEN 0 . . . 4.17 76.04 26 5.64 Yes 53 1.5 Yes 0 0 No -21 0.87 Yes 35 68.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29114410 - NM_001005735 CHEK2 0 . . . 3.41 72.12 22 5.74 Yes 18 0.78 Yes 0 0 No -26 0.54 No 40 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1225760 + NM_000455 STK11 0 . . . 1.31 67.38 30 5.74 Yes 58 -1.37 No 0 0 No -29 0.79 Yes 33 69.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68756143 + NM_133509 RAD51B 0 . . . 0.18 68.91 14 5.57 Yes 20 0.65 No 0 0 No -27 0.71 Yes 51 71.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59757568 - NM_032043 BRIP1 0 . . . 0.53 70.02 25 5.71 Yes 41 1.26 Yes 0 0 No -24 0.54 No 48 74.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90954252 - NM_002485 NBN 0 . . . 7.48 85.01 21 4.9 No 42 0.27 No 0 0 No -20 0.81 Yes 50 68.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33426026 - NM_002878 RAD51D 0 . . . 2.69 73.82 49 7.93 Yes 73 -3.42 No 0 0 No -48 0.52 No 50 64.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68537458 + NM_133509 RAD51B 0 . . . 8.96 88.26 30 7.02 Yes 17 1.44 Yes 0 0 No -29 0.9 Yes 49 83.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41238191 - NM_007294 BRCA1 0 . . . 6.12 84.37 51 8.75 Yes 61 0.26 No 0 0 No -50 0.88 Yes 48 86.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41254807 - NM_007294 BRCA1 0 . . . 5.2 71.99 21 5.39 No 32 0.23 No 0 0 No -20 0.81 Yes 22 60.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69009167 + NM_133509 RAD51B 0 . . . 7.96 75.14 15 4.58 No 57 1.32 Yes 0 0 No -53 0.92 Yes 42 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29136401 - NM_001005735 CHEK2 0 . . . 2.25 67.3 23 6.42 Yes 53 -2.64 No 0 0 No -22 0.96 Yes 34 74.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68638468 + NM_133509 RAD51B 0 . . . 3.61 84.17 13 3.75 No 12 1.13 Yes 0 0 No -26 0.61 No 46 49.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75484747 - NM_001040108 MLH3 0 . . . 0.78 84.22 29 5.91 Yes 33 1.45 Yes 0 0 No -28 0.81 Yes 50 37.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32947174 + NM_000059 BRCA2 0 . . . 4.51 87.63 20 4.47 No 33 0.92 Yes 0 0 No -19 0.84 Yes 21 69.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131954560 + NM_005732 RAD50 0 . . . 3.56 67.21 22 6.65 Yes 25 1.82 Yes 0 0 No -28 0.66 No 33 91.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69067134 + NM_133509 RAD51B 0 . . . 1.81 69.98 15 5.15 No 29 0.44 No 0 0 No -28 0.55 No 29 50.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94227073 - NM_005591 MRE11 0 . . . 1.49 61.57 27 5.2 No 2 0.52 No 0 0 No -26 0.54 No 33 36.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41234255 - NM_007294 BRCA1 0 . . . 0 65.52 33 6.14 Yes 56 0.55 No 0 0 No -32 0.68 Yes 24 61.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89659600 + NM_000314 PTEN 0 . . . 4.24 76.22 35 5.62 Yes 34 1.33 Yes 0 0 No -22 0.44 No 24 94.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89666185 + NM_000314 PTEN 0 . . . 0.13 67.26 41 6.39 Yes 40 1.23 Yes 0 0 No -26 0.64 No 49 55.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59874105 - NM_032043 BRIP1 0 . . . 7.64 87.77 15 3.93 No 20 1.76 Yes 0 0 No -54 0.66 Yes 38 96.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32966184 + NM_000059 BRCA2 0 . . . 0.53 62.1 17 6.08 Yes 69 -6.48 No 0 0 No -16 0.79 Yes 45 63.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108131451 + NM_000051 ATM 0 . . . 1.59 79.97 30 5.11 No 9 0.64 No 0 0 No -20 0.51 No 49 47.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215602242 - NM_000465 BARD1 0 . . . 3.92 74.39 26 5.63 Yes -2 0.28 No 0 0 No -25 0.76 Yes 54 53.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190652926 + NM_000534 PMS1 0 . . . 5.64 0 17 4.8 No 29 0.8 Yes 0 0 No -28 0.42 No 53 85.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108148873 + NM_000051 ATM 0 . . . 2.55 78.59 23 5.28 No 70 -5.74 No 0 0 No -22 0.52 No 43 68.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32906082 + NM_000059 BRCA2 0 . . . 6.21 82.01 35 7.03 Yes 28 -2.01 No 0 0 No -23 0.86 Yes 47 95.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68814417 + NM_004360 CDH1 0 . . . 1.12 75.18 29 5.37 No 33 1.16 Yes 0 0 No -28 0.82 Yes 25 60.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94152354 - NM_005591 MRE11 0 . . . 1.05 69.69 25 6.77 Yes 45 1.07 Yes 0 0 No -24 0.77 Yes 13 68.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68342102 + NM_133509 RAD51B 0 . . . 2.65 0 62 7.89 Yes 52 -2.45 No 0 0 No -23 0.4 No 49 75.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59941333 - NM_032043 BRIP1 0 . . . 0.36 76.03 21 5.07 No 8 0 No 0 0 No -23 0.54 No 50 89.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75496143 - NM_001040108 MLH3 0 . . . 4.46 78.03 23 5 No 63 -2.95 No 0 0 No -22 0.87 Yes 51 80.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41271341 - NM_007294 BRCA1 0 . . . 3.22 71.83 65 6.23 Yes 53 0.67 No 0 0 No -40 0.42 No 40 69.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6017948 - NM_000535 PMS2 0 . . . 1.69 78.88 39 6.69 Yes 67 -4.96 No 0 0 No -21 0.61 No 53 54.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68442470 + NM_133509 RAD51B 0 . . . 0.15 61.57 20 5.75 Yes 53 0.21 No 0 0 No -19 0.83 Yes 40 51.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94194107 - NM_005591 MRE11 0 . . . 5.71 81.39 22 7.28 Yes 73 -6.06 No 0 0 No -21 0.87 Yes 47 58.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89634744 + NM_000314 PTEN 0 . . . 0.52 64.45 86 9.92 Yes 67 0.21 No 0 0 No -41 0.79 Yes 49 48.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68349507 + NM_133509 RAD51B 0 . . . 3.56 77.41 42 4.99 No 2 1.53 Yes 0 0 No -25 0.35 No 19 83.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131939770 + NM_005732 RAD50 0 . . . 6.78 80.95 18 4.49 No 17 0.66 No 0 0 No -26 0.92 Yes 43 59.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41272301 - NM_007294 BRCA1 0 . . . 4.37 0 15 5.03 No 0 0.26 No 0 0 No -24 0.52 No 50 39.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68501462 + NM_133509 RAD51B 0 . . . 2.99 78.72 25 6.24 Yes 65 0.71 No 0 0 No -24 0.69 Yes 44 78.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40995195 + NM_001164269 RAD51 0 . . . 3.13 78.55 29 5.83 Yes 2 2.03 Yes 0 0 No -32 0.57 No 50 69.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68759030 + NM_133509 RAD51B 0 . . . 2.64 0 27 6.11 Yes 41 0.97 Yes 0 0 No -23 0.33 No 41 90.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47670109 + NM_000251 MSH2 0 . . . 8.82 84.58 14 5.29 No 38 0.93 Yes 0 0 No -21 0.54 No 41 93.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215618112 - NM_000465 BARD1 0 . . . 2.22 67.26 32 4.71 No 16 0.29 No 0 0 No -55 0.86 Yes 42 97.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84407064 - NM_139076 FAM175A 0 . . . 6.07 78.35 10 3.26 No 62 -3.66 No 0 0 No -35 0.73 Yes 39 54.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131937198 + NM_005732 RAD50 0 . . . 7.78 77.82 13 4 No -3 0.43 No 0 0 No -30 0.6 No 50 86.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23650085 - NM_024675 PALB2 0 . . . 0.31 75.94 29 6.92 Yes 52 -1.38 No 0 0 No -28 0.88 Yes 46 37.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68863698 + NM_133509 RAD51B 0 . . . 7.17 82.54 21 5.65 Yes 5 1.95 Yes 0 0 No -20 0.74 Yes 46 37.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23637092 - NM_024675 PALB2 0 . . . 5.36 84.17 21 4.5 No 50 1.15 Yes 0 0 No -20 0.55 No 15 83.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68847819 + NM_004360 CDH1 0 . . . 1.42 72.86 23 4.69 No 71 -3.11 No 0 0 No -20 0.27 No 50 41.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32906308 + NM_000059 BRCA2 0 . . . 2.23 68.09 13 5.7 Yes 3 0.02 No 0 0 No -30 0.52 No 40 65.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68810475 + NM_133509 RAD51B 0 . . . 1.01 76.26 26 4.98 No 23 -2.82 No 0 0 No -25 0.9 Yes 49 72.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59849646 - NM_032043 BRIP1 0 . . . 4.52 77.51 17 5.49 No 2 1.15 Yes 0 0 No -27 0.76 Yes 38 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69013674 + NM_133509 RAD51B 0 . . . 6.84 83.23 18 4.77 No 76 -3.87 No 0 0 No -25 0.55 No 49 76.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68412423 + NM_133509 RAD51B 0 . . . 4.11 75.54 29 5.48 No 58 1.02 Yes 0 0 No -28 0.91 Yes 55 43.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68311740 + NM_133509 RAD51B 0 . . . 2.26 74.17 35 6.3 Yes 35 -4 No 0 0 No -34 0.51 No 34 69.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32948603 + NM_000059 BRCA2 0 . . . 5.86 73.79 30 5.91 Yes 1 0.99 Yes 0 0 No -29 0.72 Yes 47 39.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215593004 - NM_000465 BARD1 0 . . . 9.83 85.86 31 4.33 No 47 0.55 No 0 0 No -30 0.67 Yes 45 45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131955860 + NM_005732 RAD50 0 . . . 2.61 70.85 28 5.37 No 21 1.56 Yes 0 0 No -27 0.71 Yes 37 83.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131897605 + NM_005732 RAD50 0 . . . 5.5 74.01 20 4.58 No 57 1.21 Yes 0 0 No -19 0.71 Yes 44 65.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37062201 + NM_000249 MLH1 0 . . . 2.86 69.82 31 4.47 No 39 1.41 Yes 0 0 No -30 0.55 No 24 74.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108203219 + NM_000051 ATM 0 . . . 1.79 67.63 16 4.24 No 1 0.62 No 0 0 No -43 0.73 Yes 32 46.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48035812 + NM_000179 MSH6 0 . . . 4.23 72.31 14 5.32 No 72 0.55 No 0 0 No -31 0.64 No 44 50.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68773030 + NM_133509 RAD51B 0 . . . 2.38 74.79 22 4.9 No 7 1.36 Yes 0 0 No -21 0.89 Yes 51 54.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68630248 + NM_133509 RAD51B 0 . . . 6.64 84.98 59 10.63 Yes 8 1.33 Yes 0 0 No -58 0.81 Yes 50 50.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68879458 + NM_133509 RAD51B 0 . . . 3.99 80.89 22 6.06 Yes 9 0.35 No 0 0 No -26 0.35 No 41 69.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215621432 - NM_000465 BARD1 0 . . . 0.65 69.79 30 6.45 Yes 74 0.72 No 0 0 No -29 0.59 No 30 50.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41238624 - NM_007294 BRCA1 0 . . . 6.33 83.15 62 7.74 Yes 1 1.47 Yes 0 0 No -38 0.9 Yes 31 60.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37078021 + NM_000249 MLH1 0 . . . 0.52 76.06 18 4.26 No -2 0.44 No 0 0 No -17 0.67 Yes 60 34.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41024256 + NM_001164269 RAD51 0 . . . 1.18 0 32 5.83 Yes 62 -4.23 No 0 0 No -31 0.74 Yes 51 62.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68879415 + NM_133509 RAD51B 0 . . . 1.37 0 15 5.84 Yes 75 -2.34 No 0 0 No -18 0.43 No 42 74.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59815275 - NM_032043 BRIP1 0 . . . 0.11 59.98 36 4.35 No 29 2.31 Yes 0 0 No -30 0.94 Yes 29 64.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215626705 - NM_000465 BARD1 0 . . . 5.81 83.69 18 5.57 Yes 36 0.18 No 0 0 No -29 0.75 Yes 39 88.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47741327 + NM_000251 MSH2 0 . . . 6.58 88.7 17 4.99 No NA NA NA 0 0 No -28 0.76 Yes 46 45.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108164364 + NM_000051 ATM 0 . . . 1.13 74.47 27 5.2 No 4 0.1 No 0 0 No -26 0.52 No 54 70.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68933976 + NM_133509 RAD51B 0 . . . 2.45 65.01 33 5.49 No 8 1.27 Yes 0 0 No -38 0.54 No 38 35.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32921997 + NM_000059 BRCA2 0 . . . 4.44 72.92 50 6.59 Yes -2 0.33 No 0 0 No -49 0.62 No 53 71.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69083014 + NM_133509 RAD51B 0 . . . 3.24 0 10 4.87 No 5 1.24 Yes 0 0 No -24 0.75 Yes 47 76.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68443909 + NM_133509 RAD51B 0 . . . 4.68 82.47 36 5.93 Yes 73 0.23 No 0 0 No -25 0.54 No 45 65.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89625085 + NM_000314 PTEN 0 . . . 0.66 78.97 20 5.1 No 61 0.59 No 0 0 No -19 0.64 No 51 85.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69045322 + NM_133509 RAD51B 0 . . . 3.72 70.36 24 6.75 Yes 3 1.02 Yes 0 0 No -23 0.51 No 41 53.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68423537 + NM_133509 RAD51B 0 . . . 0.53 0 23 4.85 No 65 -5.6 No 0 0 No -22 0.75 Yes 53 54.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68559155 + NM_133509 RAD51B 0 . . . 4.46 0 39 5.12 No 2 0.33 No 0 0 No -24 0.32 No 44 72.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47752043 + NM_000251 MSH2 0 . . . 4.94 70.1 21 6.72 Yes 35 0.63 No 0 0 No -20 0.8 Yes 48 83.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108149081 + NM_000051 ATM 0 . . . 4 73.86 19 4.28 No -3 0.58 No 0 0 No -18 0.57 No 49 47.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108208787 + NM_000051 ATM 0 . . . 1.23 76.08 41 6.4 Yes 69 1.37 Yes 0 0 No -21 0.78 Yes 32 55.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215671514 - NM_000465 BARD1 0 . . . 3.05 63.96 41 6.54 Yes 16 1.01 Yes 0 0 No -40 0.8 Yes 42 84.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104176977 - NM_001100119 XRCC3 0 . . . 5.21 84.22 15 4.58 No 8 0.87 Yes 0 0 No -25 0.45 No 50 94.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68898561 + NM_133509 RAD51B 0 . . . 4.15 69.34 23 3.95 No 33 0.65 No 0 0 No -22 0.93 Yes 47 59.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69112897 + NM_133509 RAD51B 0 . . . 1.35 69.48 13 3.78 No 41 -3.93 No 0 0 No -24 0.7 Yes 44 42.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41010129 + NM_001164269 RAD51 0 . . . 3.84 76.22 15 5.15 No 11 0.31 No 0 0 No -20 0.38 No 47 92.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108186129 + NM_000051 ATM 0 . . . 6.66 75.21 19 4.08 No 2 1.15 Yes 0 0 No -18 0.86 Yes 46 52.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68789060 + NM_004360 CDH1 0 . . . 0.27 70.63 22 5 No 50 0.07 No 0 0 No -21 0.91 Yes 52 51.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190687757 + NM_000534 PMS1 0 . . . 0.54 68.76 20 5.57 Yes 35 0.28 No 0 0 No -19 0.58 No 34 28.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68475476 + NM_133509 RAD51B 0 . . . 1.4 74.91 16 5.06 No 72 -6.15 No 0 0 No -20 0.66 No 45 49.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47667836 + NM_000251 MSH2 0 . . . 1.62 76.64 24 6.48 Yes 30 1.59 Yes 0 0 No -23 0.51 No 28 92.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89732156 + NM_000314 PTEN 0 . . . 1.7 64.62 22 5.42 No 21 0.77 Yes 0 0 No -29 0.79 Yes 37 89.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215656982 - NM_000465 BARD1 0 . . . 0.35 72 27 5.35 No 75 -2.78 No 0 0 No -34 0.76 Yes 34 47.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59906145 - NM_032043 BRIP1 0 . . . 0.65 0 16 5.07 No 1 -0.98 No 0 0 No -19 0.67 Yes 33 62.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69123248 + NM_133509 RAD51B 0 . . . 5.23 77.15 16 5.04 No 49 -1.59 No 0 0 No -20 0.49 No 46 62.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37051091 + NM_000249 MLH1 0 . . . 6.74 82.06 35 5.92 Yes 0 1.21 Yes 0 0 No -28 0.84 Yes 46 56.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68387096 + NM_133509 RAD51B 0 . . . 1.07 69.7 23 6.02 Yes 58 1.98 Yes 0 0 No -22 0.81 Yes 46 28.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69038345 + NM_133509 RAD51B 0 . . . 8.97 77.04 17 6.88 Yes 71 1.91 Yes 0 0 No -25 0.44 No 51 58.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94206757 - NM_005591 MRE11 0 . . . 4.57 73.98 18 5.64 Yes 27 0.94 Yes 0 0 No -26 0.58 No 45 94.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56784500 + NM_058216 RAD51C 0 . . . 3.47 58.68 27 5.74 Yes 16 0.81 Yes 0 0 No -20 0.49 No 42 96.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131979212 + NM_005732 RAD50 0 . . . 0.16 0 21 5.1 No 7 0.2 No 0 0 No -20 0.86 Yes 47 75.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131892964 + NM_005732 RAD50 0 . . . 5.6 78.9 20 5.82 Yes 40 1.14 Yes 0 0 No -59 0.53 No 39 93.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32891878 + NM_000059 BRCA2 0 . . . 3.9 78.24 26 5.27 No 3 1.16 Yes 0 0 No -25 0.76 Yes 47 46.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68433686 + NM_133509 RAD51B 0 . . . 6.02 91.34 28 5.29 No 74 1.58 Yes 0 0 No -22 0.62 No 45 84.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41261847 - NM_007294 BRCA1 0 . . . 5 68.86 13 4.73 No 10 0.97 Yes 0 0 No -28 0.71 Yes 44 65.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68605073 + NM_133509 RAD51B 0 . . . 6.02 77.71 25 6.75 Yes 18 0.12 No 0 0 No -27 0.47 No 40 69.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131938432 + NM_005732 RAD50 0 . . . 3.9 74.24 33 6.49 Yes 0 0.58 No 0 0 No -22 0.82 Yes 38 50.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68883885 + NM_133509 RAD51B 0 . . . 2.26 71.31 28 5.48 No -3 1.23 Yes 0 0 No -27 0.71 Yes 61 59.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37081054 + NM_000249 MLH1 0 . . . 0.26 0 14 5.3 No 11 0.08 No 0 0 No -30 0.57 No 36 57.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59821557 - NM_032043 BRIP1 0 . . . 7.09 80.77 30 5.66 Yes 68 0.4 No 0 0 No -29 0.79 Yes 43 58.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105192211 + NM_021930 RINT1 0 . . . 4.12 75.16 24 5.86 Yes 67 1.07 Yes 0 0 No -23 0.82 Yes 47 66.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68676463 + NM_133509 RAD51B 0 . . . 1.56 75.51 29 6.31 Yes 25 1.02 Yes 0 0 No -25 0.39 No 49 50.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131943107 + NM_005732 RAD50 0 . . . 6.49 76.65 12 3.27 No 3 0.72 No 0 0 No -33 0.37 No 40 42.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68325724 + NM_133509 RAD51B 0 . . . 6.61 71.81 15 4.58 No 2 0.11 No 0 0 No -23 0.5 No 41 70.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68715776 + NM_133509 RAD51B 0 . . . 6.57 80.31 32 6.08 Yes -2 0.46 No 0 0 No -35 0.6 No 64 32.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59787841 - NM_032043 BRIP1 0 . . . 6.04 74 89 8.92 Yes 4 0.26 No 0 0 No -43 0.87 Yes 41 84.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68841059 + NM_004360 CDH1 0 . . . 1.78 61.98 14 5.27 No 19 0.33 No 0 0 No -21 0.85 Yes 39 59.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37059952 + NM_000249 MLH1 0 . . . 1.31 77.36 20 4.11 No 67 -4.78 No 0 0 No -26 0.48 No 51 38.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105183545 + NM_021930 RINT1 0 . . . 2.41 72.33 55 7.45 Yes 36 1.21 Yes 0 0 No -38 0.72 Yes 22 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215672943 - NM_000465 BARD1 0 . . . 1.89 72.26 35 6.06 Yes 30 1.2 Yes 0 0 No -30 0.7 Yes 28 46.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108109517 + NM_000051 ATM 0 . . . 3.19 69.93 30 4.7 No 56 1.16 Yes 0 0 No -29 0.72 Yes 38 55.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41278547 - NM_007294 BRCA1 0 . . . 10.19 94.56 21 4.8 No 51 1.11 Yes 0 0 No -21 0.63 No 49 36.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69127910 + NM_133509 RAD51B 0 . . . 2.29 61.16 16 4.47 No 68 -5.15 No 0 0 No -22 0.88 Yes 39 78.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59869201 - NM_032043 BRIP1 0 . . . 6.2 83.5 45 6.62 Yes 44 0.76 No 0 0 No -44 0.66 Yes 42 60.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94185967 - NM_005591 MRE11 0 . . . 0.97 73.75 24 4.14 No 75 0.36 No 0 0 No -39 0.83 Yes 63 49.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40992790 + NM_001164269 RAD51 0 . . . 4.23 73.06 36 5.86 Yes 13 0.15 No 0 0 No -21 0.83 Yes 45 74.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47773250 + NM_000251 MSH2 0 . . . 4.63 70.15 13 4.36 No 18 1.72 Yes 0 0 No -38 0.49 No 40 85.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47711259 + NM_000251 MSH2 0 . . . 2.1 76.6 23 6.24 Yes -2 0.92 Yes 0 0 No -22 0.84 Yes 46 37.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59780556 - NM_032043 BRIP1 0 . . . 1.37 76.91 26 6.51 Yes 22 -3.05 No 0 0 No -25 0.67 Yes 54 40.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6014829 - NM_000535 PMS2 0 . . . 2.8 0 18 5.72 Yes 53 -2.12 No 0 0 No -33 0.57 No 49 51.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59841023 - NM_032043 BRIP1 0 . . . 1.56 66.61 25 4.89 No 16 0.23 No 0 0 No -29 0.52 No 42 81.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68488189 + NM_133509 RAD51B 0 . . . 2.92 74.87 18 4.58 No 50 0.52 No 0 0 No -17 0.84 Yes 48 69.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68493122 + NM_133509 RAD51B 0 . . . 3.01 76.18 31 5.54 No 9 0.51 No 0 0 No -24 0.61 No 49 90.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41265991 - NM_007294 BRCA1 0 . . . 1.08 84.22 9 4.67 No 33 1.13 Yes 0 0 No -22 0.7 Yes 25 50.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68817764 + NM_004360 CDH1 0 . . . 2.24 80.12 12 5.74 Yes 7 1.16 Yes 0 0 No -30 0.28 No 51 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215646610 - NM_000465 BARD1 0 . . . 4.07 70.5 20 5.48 No 30 0.63 No 0 0 No -23 0.53 No 49 73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37035633 + NM_000249 MLH1 0 . . . 2.52 68.33 38 7 Yes 16 0.1 No 0 0 No -37 0.75 Yes 36 95.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90962859 - NM_002485 NBN 0 . . . 4.26 81.41 37 5.45 No 19 0.94 Yes 0 0 No -29 0.58 No 44 42.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75491036 - NM_001040108 MLH3 0 . . . 0.14 74.44 14 4.11 No 64 1.1 Yes 0 0 No -31 0.78 Yes 36 49.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41003253 + NM_001164269 RAD51 0 . . . 0.82 67.9 36 6.24 Yes 61 0.61 No 0 0 No -35 0.62 No 42 55.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89685610 + NM_000314 PTEN 0 . . . 0.3 66.46 39 6.18 Yes 67 0.37 No 0 0 No -25 0.6 No 63 40.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215614535 - NM_000465 BARD1 0 . . . 3.43 82.94 26 5 No 46 0.34 No 0 0 No -23 0.71 Yes 48 72.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69042028 + NM_133509 RAD51B 0 . . . 1.04 74.63 48 7.08 Yes -4 0.29 No 0 0 No -22 0.51 No 52 95.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68337360 + NM_133509 RAD51B 0 . . . 4.82 88.67 16 5.83 Yes 43 0.05 No 0 0 No -27 0.49 No 48 69.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47699509 + NM_000251 MSH2 0 . . . 1.96 81.48 18 4.68 No 41 1 Yes 0 0 No -30 0.6 No 49 89.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48018609 + NM_000179 MSH6 0 . . . 0.33 73.15 14 5.39 No 69 1.08 Yes 0 0 No -30 0.27 No 51 74.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68350729 + NM_133509 RAD51B 0 . . . 0.35 53.19 23 4.69 No 25 0.44 No 0 0 No -22 0.85 Yes 35 65.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190681926 + NM_000534 PMS1 0 . . . 0.73 69.26 21 5.91 Yes 75 -5.48 No 0 0 No -20 0.57 No 34 42.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131964731 + NM_005732 RAD50 0 . . . 7.09 89.29 37 6.02 Yes 23 0.23 No 0 0 No -21 0.65 No 48 92.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37033756 + NM_000249 MLH1 0 . . . 3.84 73.61 24 5.82 Yes 0 0.05 No 0 0 No -23 0.69 Yes 51 52.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90973197 - NM_002485 NBN 0 . . . 1.89 0 23 5.27 No 71 -4.1 No 0 0 No -22 0.93 Yes 39 59.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673936 + NM_000534 PMS1 0 . . . 3.35 67.6 27 4.51 No -1 0.25 No 0 0 No -27 0.65 No 45 40.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645156 - NM_024675 PALB2 0 . . . 5.47 77.46 31 5.57 Yes 61 0.22 No 0 0 No -24 0.58 No 37 55.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68831618 + NM_133509 RAD51B 0 . . . 5.67 78.01 29 7.35 Yes 6 0.88 Yes 0 0 No -28 0.93 Yes 48 70.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59908730 - NM_032043 BRIP1 0 . . . 4.69 77.37 31 5.46 No 22 0.69 No 0 0 No -30 0.56 No 42 60.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108197818 + NM_000051 ATM 0 . . . 4.51 74.8 56 6.19 Yes 23 0.68 No 0 0 No -39 0.62 No 40 92.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23647852 - NM_024675 PALB2 0 . . . 6.77 81.74 15 5.39 No 6 0.42 No 0 0 No -39 0.47 No 43 56.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7581805 - NM_000546 TP53 0 . . . 0.04 0 20 5.83 Yes 70 -5.36 No 0 0 No -27 0.23 No 51 47.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108240105 + NM_000051 ATM 0 . . . 8.1 77.25 17 4.79 No 27 0.67 No 0 0 No -19 0.58 No 45 54.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29085988 - NM_001005735 CHEK2 0 . . . 1.22 70.61 48 5.54 No 48 0.43 No 0 0 No -35 0.59 No 52 73.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89726923 + NM_000314 PTEN 0 . . . 2.45 76.26 24 5.8 Yes 74 0.17 No 0 0 No -29 0.75 Yes 48 67.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131901954 + NM_005732 RAD50 0 . . . 4.76 71.94 22 5.2 No 22 0.17 No 0 0 No -21 0.88 Yes 50 56.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68794993 + NM_133509 RAD51B 0 . . . 3.14 70.42 21 5.2 No 20 0.95 Yes 0 0 No -21 0.58 No 38 88.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89692679 + NM_000314 PTEN 0 . . . 3.54 60.15 18 7 Yes 2 -2.08 No 0 0 No -17 0.48 No 44 76.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23623121 - NM_024675 PALB2 0 . . . 0.73 77.69 21 6.22 Yes 71 0.9 Yes 0 0 No -20 0.79 Yes 47 52.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68915803 + NM_133509 RAD51B 0 . . . 4.92 76.29 17 5.69 Yes 2 2.28 Yes 0 0 No -21 0.46 No 35 40.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59930319 - NM_032043 BRIP1 0 . . . 1.13 71.64 26 6.44 Yes 68 0.16 No 0 0 No -26 0.53 No 49 84.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215637840 - NM_000465 BARD1 0 . . . 0.95 61.78 41 5.01 No 41 -4.46 No 0 0 No -30 0.45 No 22 39.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32964762 + NM_000059 BRCA2 0 . . . 2.72 77.35 27 5.2 No -2 0.59 No 0 0 No -24 0.31 No 48 85.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59870377 - NM_032043 BRIP1 0 . . . 3.88 75.77 30 5.56 Yes 66 1.67 Yes 0 0 No -29 0.74 Yes 52 66.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104182494 - NM_001100119 XRCC3 0 . . . 7 65.39 23 4.99 No NA NA NA 0 0 No -22 0.8 Yes 35 29.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32910760 + NM_000059 BRCA2 0 . . . 6.37 82.78 29 5.56 Yes 2 1.71 Yes 0 0 No -28 0.81 Yes 46 60.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215628167 - NM_000465 BARD1 0 . . . 7.16 78.23 20 6.16 Yes 35 0.48 No 0 0 No -24 0.38 No 47 88.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68838309 + NM_133509 RAD51B 0 . . . 4.31 75.1 28 4.88 No 22 -2.63 No 0 0 No -23 0.84 Yes 49 87.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32913773 + NM_000059 BRCA2 0 . . . 3.46 75.34 28 5.72 Yes 30 1.56 Yes 0 0 No -27 0.72 Yes 28 72.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59918031 - NM_032043 BRIP1 0 . . . 4.8 77.13 32 9.49 Yes 12 -1.31 No 0 0 No -31 0.86 Yes 46 78.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94159145 - NM_005591 MRE11 0 . . . 3.28 0 31 5.39 No 75 0.49 No 0 0 No -26 0.76 Yes 43 81.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152357312 - NM_005431 XRCC2 0 . . . 1.25 0 12 5.2 No 76 0.64 No 0 0 No -24 0.29 No 50 92.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68652513 + NM_133509 RAD51B 0 . . . 0.4 76.16 19 6.24 Yes 74 -4.91 No 0 0 No -33 0.7 Yes 47 73.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68406975 + NM_133509 RAD51B 0 . . . 2.24 80.12 28 5.66 Yes 7 1.16 Yes 0 0 No -28 0.62 No 51 78.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41252450 - NM_007294 BRCA1 0 . . . 0.56 78.54 25 4.88 No 62 -5.11 No 0 0 No -28 0.73 Yes 45 62.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68868900 + NM_133509 RAD51B 0 . . . 10.4 82.48 21 5.66 Yes 38 1.42 Yes 0 0 No -20 0.7 Yes 45 88.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90968020 - NM_002485 NBN 0 . . . 0.55 0 25 5.04 No 25 0.78 Yes 0 0 No -29 0.55 No 33 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68393781 + NM_133509 RAD51B 0 . . . 2.76 76.76 20 4.39 No 28 0.62 No 0 0 No -22 0.52 No 49 69.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68902264 + NM_133509 RAD51B 0 . . . 1.48 67.97 12 3.73 No 61 0.4 No 0 0 No -23 0.57 No 46 60.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32901141 + NM_000059 BRCA2 0 . . . 6.49 68.77 19 4.9 No 75 0.9 Yes 0 0 No -18 0.45 No 36 64.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47718840 + NM_000251 MSH2 0 . . . 1.96 78.88 36 6.29 Yes 22 -3.07 No 0 0 No -35 0.76 Yes 44 82.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68603442 + NM_133509 RAD51B 0 . . . 0.5 61.54 26 5.78 Yes 76 0.37 No 0 0 No -28 0.44 No 38 60.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75482755 - NM_001040108 MLH3 0 . . . 6.08 79.7 48 5.67 Yes 64 1.52 Yes 0 0 No -47 0.65 No 26 86.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68429944 + NM_133509 RAD51B 0 . . . 4.54 69.9 13 5.29 No 62 0.38 No 0 0 No -19 0.47 No 38 50.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59788931 - NM_032043 BRIP1 0 . . . 8.52 74.91 19 4.68 No 66 0.76 No 0 0 No -22 0.36 No 49 65.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32974134 + NM_000059 BRCA2 0 . . . 0.07 63.07 19 4.58 No 34 1.01 Yes 0 0 No -38 0.79 Yes 19 45.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59812483 - NM_032043 BRIP1 0 . . . 1.3 69.03 24 4.12 No 68 -3.34 No 0 0 No -23 0.83 Yes 28 52.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190716629 + NM_000534 PMS1 0 . . . 1.93 73.28 17 6.48 Yes 11 0.15 No 0 0 No -16 0.8 Yes 47 66.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29131438 - NM_001005735 CHEK2 0 . . . 1.85 66.39 37 7.51 Yes 24 1.24 Yes 0 0 No -42 0.74 Yes 43 74.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68850112 + NM_133509 RAD51B 0 . . . 2.59 73.11 33 6.08 Yes 61 -1.36 No 0 0 No -32 0.91 Yes 51 67.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152345299 - NM_005431 XRCC2 0 . . . 0.42 74.73 67 7.09 Yes 33 1.16 Yes 0 0 No -41 0.58 No 40 65.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68681244 + NM_133509 RAD51B 0 . . . 1.27 78.96 27 5.73 Yes 6 0.81 Yes 0 0 No -26 0.67 Yes 52 53.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47702839 + NM_000251 MSH2 0 . . . 0.14 0 31 5.57 Yes 41 -5.04 No 0 0 No -24 0.5 No 36 22.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108168318 + NM_000051 ATM 0 . . . 2.21 68.97 40 6.39 Yes 0 0.24 No 0 0 No -24 0.64 No 38 50.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69019739 + NM_133509 RAD51B 0 . . . 4.54 79.44 44 5.97 Yes 4 1.26 Yes 0 0 No -33 0.49 No 40 39.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47799615 + NM_000251 MSH2 0 . . . 4.29 89.3 41 8.93 Yes 62 -2.53 No 0 0 No -40 0.61 No 52 63.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68297976 + NM_133509 RAD51B 0 . . . 2.06 75.77 11 5.14 No 61 0.52 No 0 0 No -53 0.57 No 51 39.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68824598 + NM_133509 RAD51B 0 . . . 3.6 71.73 18 6 Yes 8 -0.03 No 0 0 No -26 0.77 Yes 50 52.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89658762 + NM_000314 PTEN 0 . . . 3.82 76.62 15 6.46 Yes 31 0.5 No 0 0 No -25 0.51 No 46 58.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68963805 + NM_133509 RAD51B 0 . . . 9.46 85.98 20 5.57 Yes 68 0.48 No 27 0.84 Yes -19 0.58 No 43 64.72 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr5 131954951 + NM_005732 RAD50 0 . . . 7.57 88.57 19 3.98 No 76 0.38 No 0 0 No -43 0.83 Yes 42 59.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69083856 + NM_133509 RAD51B 0 . . . 1.7 78.09 16 5.1 No 55 0.93 Yes 0 0 No -46 0.4 No 49 53.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68475256 + NM_133509 RAD51B 0 . . . 5.77 82.65 18 5.29 No 27 0.85 Yes 0 0 No -50 0.31 No 37 57.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68937022 + NM_133509 RAD51B 0 . . . 1.35 0 22 4.79 No 45 1.11 Yes 0 0 No -21 0.69 Yes 46 61.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32962719 + NM_000059 BRCA2 0 . . . 7.99 79.65 14 6.07 Yes 43 0.41 No 0 0 No -21 0.48 No 50 46.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47667540 + NM_000251 MSH2 0 . . . 2.97 72.65 23 4.08 No 16 1.09 Yes 0 0 No -22 0.52 No 42 90.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68436356 + NM_133509 RAD51B 0 . . . 0.93 83.57 16 4.69 No 2 0.52 No 0 0 No -36 0.56 No 41 65.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47649921 + NM_000251 MSH2 0 . . . 1.1 0 45 5.27 No 8 0.02 No 0 0 No -32 0.48 No 50 40.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105189669 + NM_021930 RINT1 0 . . . 4.75 82.31 15 4.58 No 57 1.08 Yes 0 0 No -57 0.65 No 55 50.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47739600 + NM_000251 MSH2 0 . . . 5.47 69.28 15 5.25 No 16 1.06 Yes 0 0 No -26 0.56 No 39 85.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131938451 + NM_005732 RAD50 0 . . . 0.97 70.16 17 5.94 Yes 66 -5.82 No 0 0 No -31 0.74 Yes 47 31.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108225304 + NM_000051 ATM 0 . . . 3.49 66.63 14 5 No -4 0.12 No 0 0 No -47 0.67 Yes 40 63.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68356577 + NM_133509 RAD51B 0 . . . 3.36 72.72 28 4.35 No 41 1.15 Yes 0 0 No -27 0.52 No 47 50.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215661995 - NM_000465 BARD1 0 . . . 3.55 77.3 13 4.9 No 26 -3.65 No 0 0 No -23 0.51 No 38 73.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47687564 + NM_000251 MSH2 0 . . . 7.12 79.19 22 6.16 Yes -3 0.87 Yes 0 0 No -21 0.54 No 41 67.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47726985 + NM_000251 MSH2 0 . . . 1.6 73.77 10 3.67 No 66 0.69 No 0 0 No -24 0.41 No 52 93.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89639201 + NM_000314 PTEN 0 . . . 4.05 85.37 25 5.98 Yes 33 0.62 No 0 0 No -24 0.67 Yes 50 90.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215665272 - NM_000465 BARD1 0 . . . 0.36 0 22 4.23 No 13 0.49 No 0 0 No -21 0.43 No 44 53.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68471901 + NM_133509 RAD51B 0 . . . 1.5 0 30 5.51 No 45 0.98 Yes 0 0 No -19 0.5 No 32 49.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69056049 + NM_133509 RAD51B 0 . . . 4.52 80.23 32 5.72 Yes 12 0.28 No 0 0 No -31 0.54 No 49 66.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215647197 - NM_000465 BARD1 0 . . . 5.38 69.7 26 5.17 No 71 0.78 Yes 0 0 No -26 0.84 Yes 43 59.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68848560 + NM_133509 RAD51B 0 . . . 5.76 85.25 41 6.8 Yes 27 0.38 No 0 0 No -25 0.54 No 27 43.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68400892 + NM_133509 RAD51B 0 . . . 1.06 69.27 28 5.38 No 38 1.02 Yes 0 0 No -27 0.61 No 19 50.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75519024 - NM_001040108 MLH3 0 . . . 1.74 68.71 33 6.24 Yes 27 0.7 No 0 0 No -56 0.53 No 31 50.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68583286 + NM_133509 RAD51B 0 . . . 4.17 77.56 43 9.52 Yes 63 0.3 No 0 0 No -42 0.38 No 46 78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69080472 + NM_133509 RAD51B 0 . . . 2.11 77.09 22 4.35 No 59 1.26 Yes 0 0 No -21 0.81 Yes 51 41.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68561256 + NM_133509 RAD51B 0 . . . 2.74 74.66 31 7.27 Yes 1 0.17 No 0 0 No -30 0.53 No 40 34.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190725669 + NM_000534 PMS1 0 . . . 6.54 91.11 22 11.06 Yes 23 0.71 No 0 0 No -31 0.49 No 41 88.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68665240 + NM_133509 RAD51B 0 . . . 6.44 80.26 46 6.84 Yes 9 0.59 No 0 0 No -22 0.57 No 37 47.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108116682 + NM_000051 ATM 0 . . . 1.28 0 10 5.39 No 45 0.97 Yes 0 0 No -22 0.7 Yes 13 28.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56808855 + NM_058216 RAD51C 0 . . . 6.23 80.23 19 5.38 No 57 1.13 Yes 0 0 No -42 0.34 No 43 56.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6030409 - NM_000535 PMS2 0 . . . 4.53 86.09 33 7.55 Yes 13 1.86 Yes 0 0 No -32 0.94 Yes 45 56.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68864306 + NM_004360 CDH1 0 . . . 3.8 72.18 12 5.31 No 5 0.49 No 0 0 No -29 0.45 No 53 85.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47649625 + NM_000251 MSH2 0 . . . 2.51 72.35 35 6.4 Yes 3 0.91 Yes 0 0 No -34 0.55 No 49 70.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68903033 + NM_133509 RAD51B 0 . . . 4.22 71.02 22 5.29 No 36 1.03 Yes 0 0 No -21 0.74 Yes 48 77.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68600290 + NM_133509 RAD51B 0 . . . 1.08 68.72 29 4.62 No 59 1.41 Yes 0 0 No -23 0.88 Yes 42 87.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89700984 + NM_000314 PTEN 0 . . . 4.39 67.54 13 4.33 No 9 0.57 No 0 0 No -23 0.82 Yes 49 63.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89641297 + NM_000314 PTEN 0 . . . 4.8 73.92 31 6.08 Yes 21 0.95 Yes 0 0 No -34 0.38 No 46 74.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89663138 + NM_000314 PTEN 0 . . . 5.18 86.51 33 5.83 Yes 65 -1.59 No 0 0 No -33 0.34 No 52 47.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68630792 + NM_133509 RAD51B 0 . . . 7.37 79.26 22 6.61 Yes 52 0.31 No 0 0 No -38 0.7 Yes 40 53.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69141567 + NM_133509 RAD51B 0 . . . 4.69 81.43 29 5.82 Yes 40 0.73 No 0 0 No -24 0.6 No 44 58.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89633201 + NM_000314 PTEN 0 . . . 1.39 0 23 5.39 No 43 0.5 No 0 0 No -22 0.86 Yes 52 56.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59856482 - NM_032043 BRIP1 0 . . . 2.54 73.85 16 4.25 No 71 -4.53 No 0 0 No -33 0.55 No 51 84.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59792484 - NM_032043 BRIP1 0 . . . 5.24 83.52 17 6.86 Yes 52 1.42 Yes 0 0 No -16 0.33 No 49 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68955646 + NM_133509 RAD51B 0 . . . 3.73 81.08 26 6 Yes 62 -5.26 No 0 0 No -25 0.91 Yes 52 25.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59838891 - NM_032043 BRIP1 0 . . . 1.15 0 21 6.63 Yes 54 1.16 Yes 0 0 No -23 0.59 No 39 75.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59899575 - NM_032043 BRIP1 0 . . . 0.78 72.41 42 5.83 Yes 59 0.42 No 0 0 No -36 0.74 Yes 51 52.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190716721 + NM_000534 PMS1 0 . . . 8.34 82.11 28 7.07 Yes 23 0.23 No 0 0 No -23 0.54 No 35 80.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84403923 - NM_139076 FAM175A 0 . . . 2.54 0 51 6.83 Yes 75 0.67 No 0 0 No -39 0.7 Yes 53 77.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105194123 + NM_021930 RINT1 0 . . . 3.15 68.34 25 5.09 No 23 1.57 Yes 0 0 No -27 0.64 No 40 64.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108176949 + NM_000051 ATM 0 . . . 0.85 62.54 17 5.7 Yes 37 0.78 Yes 0 0 No -26 0.45 No 21 34.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68850102 + NM_004360 CDH1 0 . . . 3.6 85.02 20 4.99 No 4 1.2 Yes 0 0 No -43 0.51 No 54 59.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89648403 + NM_000314 PTEN 0 . . . 5.06 67.66 19 5.74 Yes 11 0.67 No 0 0 No -24 0.53 No 40 33.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105191053 + NM_021930 RINT1 0 . . . 10.34 95.69 31 7.85 Yes 46 0.66 No 0 0 No -30 0.87 Yes 50 59.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68825152 + NM_004360 CDH1 0 . . . 8.29 83.41 26 3.84 No 43 -0.71 No 0 0 No -25 0.47 No 41 59.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59833920 - NM_032043 BRIP1 0 . . . 2.1 0 18 5.35 No 1 0.89 Yes 0 0 No -25 0.46 No 45 45.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41232820 - NM_007294 BRCA1 0 . . . 4.65 77.32 19 5.48 No 28 0.99 Yes 0 0 No -18 0.56 No 30 32.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68823045 + NM_004360 CDH1 0 . . . 1.58 81.72 34 5.29 No 21 1.48 Yes 0 0 No -33 0.5 No 50 86.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29130860 - NM_001005735 CHEK2 0 . . . 0.66 71.3 44 5.13 No 72 -6.1 No 0 0 No -29 0.84 Yes 49 42.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215588500 - NM_000465 BARD1 0 . . . 2.16 0 12 5.74 Yes 64 1.18 Yes 0 0 No -47 0.6 No 37 38.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40998067 + NM_001164269 RAD51 0 . . . 4.72 71.63 22 3.42 No 21 1.61 Yes 0 0 No -21 0.79 Yes 37 87.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21982856 - NM_000077 CDKN2A 0 . . . 2.65 72.59 15 5.8 Yes 16 1.39 Yes 0 0 No -51 0.39 No 42 76.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215608078 - NM_000465 BARD1 0 . . . 0.22 55.38 28 5.19 No 24 0.46 No 0 0 No -27 0.85 Yes 30 38.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75480005 - NM_001040108 MLH3 0 . . . 7.73 79.89 24 6.63 Yes 12 0.74 No 0 0 No -23 0.91 Yes 35 72.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68390251 + NM_133509 RAD51B 0 . . . 6.55 80.23 18 4.78 No 57 1.14 Yes 0 0 No -25 0.75 Yes 43 78.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45805280 - NM_001048171 MUTYH 0 . . . 0.29 63.21 125 13.05 Yes 25 -2.04 No 0 0 No -23 0.36 No 49 56.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215652588 - NM_000465 BARD1 0 . . . 2.19 58.28 44 8.47 Yes 14 0.85 Yes 0 0 No -35 0.63 No 44 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68773951 + NM_004360 CDH1 0 . . . 3.96 83.9 26 6.75 Yes 0 0.85 Yes 0 0 No -25 0.88 Yes 38 56.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59890530 - NM_032043 BRIP1 0 . . . 4.64 74.46 17 4.23 No 64 2.07 Yes 0 0 No -27 0.52 No 35 85.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47674551 + NM_000251 MSH2 0 . . . 0.46 0 19 4.8 No 57 1.13 Yes 0 0 No -41 0.66 Yes 54 64.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69096442 + NM_133509 RAD51B 0 . . . 3.07 79.9 13 5.1 No 56 1.12 Yes 0 0 No -19 0.41 No 46 43.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21970185 - NM_000077 CDKN2A 0 . . . 6.13 72.23 65 8.11 Yes 49 0.76 No 0 0 No -25 0.67 Yes 27 73.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37084638 + NM_000249 MLH1 0 . . . 4.32 70.8 14 4.42 No 62 0.19 No 0 0 No -33 0.68 Yes 48 55.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32948768 + NM_000059 BRCA2 0 . . . 2.82 79.59 19 6.08 Yes 1 1.62 Yes 0 0 No -32 0.64 No 50 64.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89630075 + NM_000314 PTEN 0 . . . 3.27 78.11 16 5.16 No 68 1.16 Yes 0 0 No -21 0.64 No 49 53.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68514114 + NM_133509 RAD51B 0 . . . 3.89 70.74 16 5.26 No 35 0.73 No 0 0 No -25 0.53 No 32 43.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68512585 + NM_133509 RAD51B 0 . . . 7 91.22 32 5.82 Yes 28 0.89 Yes 0 0 No -31 0.89 Yes 48 75.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89715460 + NM_000314 PTEN 0 . . . 2.6 66.16 47 8.03 Yes 47 1 Yes 0 0 No -36 0.51 No 43 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41252795 - NM_007294 BRCA1 0 . . . 1.79 69.25 23 6.93 Yes 58 -3.88 No 0 0 No -22 0.96 Yes 53 60.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190698188 + NM_000534 PMS1 0 . . . 2.7 63.8 42 6.71 Yes 47 0.63 No 0 0 No -30 0.34 No 43 80.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68581962 + NM_133509 RAD51B 0 . . . 8.6 85.1 22 5.73 Yes 9 0.36 No 0 0 No -28 0.89 Yes 49 56.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47661275 + NM_000251 MSH2 0 . . . 0.55 65.63 20 5.68 Yes 17 -0.9 No 0 0 No -19 0.74 Yes 41 37.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68670223 + NM_133509 RAD51B 0 . . . 4.87 69.25 19 5 No 64 0.06 No 0 0 No -18 0.61 No 50 82.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68727715 + NM_133509 RAD51B 0 . . . 7.31 91.77 19 5 No 6 2.11 Yes 0 0 No -21 0.51 No 47 80.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59836110 - NM_032043 BRIP1 0 . . . 1.12 84.2 30 5.83 Yes 8 0.56 No 0 0 No -29 0.93 Yes 50 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68340472 + NM_133509 RAD51B 0 . . . 1.2 67.82 20 5.46 No 28 -3.69 No 0 0 No -23 0.72 Yes 43 47.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867470 - NM_032043 BRIP1 0 . . . 0.57 59.51 19 5.36 No 66 -5.95 No 0 0 No -21 0.58 No 50 49.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68669344 + NM_133509 RAD51B 0 . . . 5.72 90.92 51 5.69 Yes 57 0.53 No 0 0 No -37 0.64 No 10 59.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41014279 + NM_001164269 RAD51 0 . . . 6.62 82.9 9 4.9 No -4 1.55 Yes 0 0 No -17 0.36 No 39 83.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68455046 + NM_133509 RAD51B 0 . . . 2.08 71.42 11 4.12 No 37 0.16 No 0 0 No -30 0.51 No 52 43.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69029052 + NM_133509 RAD51B 0 . . . 5.29 86.63 35 5.96 Yes 10 0.1 No 0 0 No -34 0.44 No 48 90.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108135080 + NM_000051 ATM 0 . . . 0.27 68.92 32 5.06 No 56 0.04 No 0 0 No -25 0.52 No 47 38.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68978157 + NM_133509 RAD51B 0 . . . 0.11 0 28 4.15 No 57 0.23 No 0 0 No -27 0.39 No 15 42.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68823812 + NM_133509 RAD51B 0 . . . 4.95 76.05 11 4.12 No 6 0.92 Yes 0 0 No -35 0.53 No 39 47.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23641879 - NM_024675 PALB2 0 . . . 8.07 84.49 19 4.47 No 75 0.73 No 0 0 No -37 0.41 No 45 93.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89693380 + NM_000314 PTEN 0 . . . 8.41 77.37 17 5.74 Yes 17 1.05 Yes 0 0 No -23 0.69 Yes 41 90.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131960823 + NM_005732 RAD50 0 . . . 3.61 84.17 21 5.65 Yes 35 0.45 No 0 0 No -20 0.49 No 23 70.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32929243 + NM_000059 BRCA2 0 . . . 4.44 84.84 30 5.98 Yes 4 0.68 No 0 0 No -24 0.35 No 48 50.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45800437 - NM_001048171 MUTYH 0 . . . 3.62 77.87 23 4.85 No -1 0.76 No 0 0 No -22 0.76 Yes 52 65.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68417755 + NM_133509 RAD51B 0 . . . 1.66 78.85 34 7.44 Yes 57 -5.31 No 0 0 No -33 0.76 Yes 47 62.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32973426 + NM_000059 BRCA2 0 . . . 3.81 88.71 28 8.28 Yes 59 0.12 No 0 0 No -28 0.74 Yes 49 85.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68868948 + NM_133509 RAD51B 0 . . . 3.42 74.67 25 5.36 No 61 1.21 Yes 0 0 No -24 0.89 Yes 34 82.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90994054 - NM_002485 NBN 0 . . . 2.69 69.54 23 5 No 69 1.03 Yes 0 0 No -26 0.73 Yes 45 27.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47725416 + NM_000251 MSH2 0 . . . 2.75 69.57 29 5.48 No 37 2.39 Yes 0 0 No -28 0.85 Yes 45 35.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90986736 - NM_002485 NBN 0 . . . 2.8 72.86 30 5.38 No 48 1.24 Yes 0 0 No -29 0.8 Yes 34 73.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68834983 + NM_004360 CDH1 0 . . . 1.29 0 19 4.79 No 67 0.65 No 0 0 No -18 0.69 Yes 47 85.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69005675 + NM_133509 RAD51B 0 . . . 5.79 77.99 13 5.08 No 75 2.17 Yes 0 0 No -25 0.36 No 47 70.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29088994 - NM_001005735 CHEK2 0 . . . 3.86 74.44 58 8.72 Yes -4 1.05 Yes 0 0 No -33 0.67 Yes 58 48.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68595536 + NM_133509 RAD51B 0 . . . 2.28 72.79 10 4 No 63 -4.31 No 0 0 No -25 0.44 No 46 64.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68336845 + NM_133509 RAD51B 0 . . . 0.46 64.33 34 6.52 Yes 62 -5.69 No 0 0 No -24 0.58 No 32 43.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68515126 + NM_133509 RAD51B 0 . . . 4.12 72.05 27 5.2 No -2 0.21 No 0 0 No -47 0.7 Yes 26 68.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68835184 + NM_133509 RAD51B 0 . . . 5.33 77.79 23 5.6 Yes 11 1.04 Yes 0 0 No -22 0.61 No 47 79.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59876470 - NM_032043 BRIP1 0 . . . 2.76 70.73 21 5.1 No 58 -4.4 No 0 0 No -20 0.6 No 55 38.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45804179 - NM_001048171 MUTYH 0 . . . 2.71 64.94 59 7.28 Yes 62 0.65 No 0 0 No -21 0.6 No 53 65.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68645985 + NM_133509 RAD51B 0 . . . 9.83 99.55 25 5.38 No 64 0.51 No 0 0 No -22 0.8 Yes 53 82.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105192078 + NM_021930 RINT1 0 . . . 1.36 65.72 35 6.72 Yes 76 0.77 Yes 0 0 No -34 0.28 No 17 36.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37058385 + NM_000249 MLH1 0 . . . 0.6 72.37 23 5.36 No 56 -1.07 No 0 0 No -22 0.78 Yes 44 86.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69022866 + NM_133509 RAD51B 0 . . . 2.41 78.21 18 4.9 No 28 0.99 Yes 0 0 No -22 0.64 No 48 63.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108222945 + NM_000051 ATM 0 . . . 1.22 63.33 27 5.39 No 51 -5.32 No 0 0 No -26 0.82 Yes 46 58.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89639264 + NM_000314 PTEN 0 . . . 4.92 85.22 15 5.73 Yes 4 1.2 Yes 0 0 No -26 0.75 Yes 43 74.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90958879 - NM_002485 NBN 0 . . . 1.07 64.81 33 6.23 Yes 56 -5.82 No 24 0.61 Yes -28 0.36 No 42 51.59 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68493481 + NM_133509 RAD51B 0 . . . 5.65 76.81 32 6.59 Yes 16 -2.37 No 0 0 No -34 0.66 Yes 42 66.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68604037 + NM_133509 RAD51B 0 . . . 0.67 66.38 14 5.78 Yes 0 0.18 No 0 0 No -18 0.83 Yes 42 56.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105179540 + NM_021930 RINT1 0 . . . 6.54 76.29 24 4.9 No 43 2.1 Yes 0 0 No -23 0.34 No 15 80.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68582540 + NM_133509 RAD51B 0 . . . 0.51 0 12 5.8 Yes 66 -3.04 No 0 0 No -27 0.75 Yes 41 48.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68473697 + NM_133509 RAD51B 0 . . . 2.67 77.07 28 4.79 No 72 0.35 No 0 0 No -25 0.81 Yes 49 39.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105200240 + NM_021930 RINT1 0 . . . 5.66 74.75 30 4.48 No 18 0.93 Yes 0 0 No -29 0.57 No 40 81.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68310140 + NM_133509 RAD51B 0 . . . 1.52 69.52 34 7.27 Yes 12 0.58 No 20 0.31 Yes -33 0.76 Yes 46 82.25 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr11 94192265 - NM_005591 MRE11 0 . . . 4.99 83.54 26 4.43 No 14 1.15 Yes 0 0 No -31 0.63 No 44 72.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48029088 + NM_000179 MSH6 0 . . . 2.12 65.32 30 4.58 No 50 0.73 No 0 0 No -30 0.58 No 47 29.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32938292 + NM_000059 BRCA2 0 . . . 2.31 78.9 20 5.45 No 6 0.84 Yes 0 0 No -26 0.55 No 41 85.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68841879 + NM_133509 RAD51B 0 . . . 3.7 74.92 40 7.12 Yes 36 0.06 No 0 0 No -39 0.56 No 62 56.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68962411 + NM_133509 RAD51B 0 . . . 2.04 0 35 8.36 Yes 47 0.8 Yes 0 0 No -34 0.72 Yes 11 55.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68790327 + NM_004360 CDH1 0 . . . 1.61 76.05 14 5.38 No 45 -4.83 No 0 0 No -22 0.7 Yes 51 58.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59796895 - NM_032043 BRIP1 0 . . . 0.58 72.26 27 5.74 Yes 31 1.22 Yes 0 0 No -26 0.9 Yes 27 69.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215662191 - NM_000465 BARD1 0 . . . 1.29 73.26 32 5.57 Yes 42 -1.81 No 0 0 No -47 0.47 No 40 70.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190713096 + NM_000534 PMS1 0 . . . 3.03 72.28 13 5.1 No 12 0.69 No 0 0 No -21 0.87 Yes 46 65.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47794798 + NM_000251 MSH2 0 . . . 6.76 80.1 22 4.8 No 36 0.28 No 0 0 No -21 0.51 No 40 78.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6036744 - NM_000535 PMS2 0 . . . 0.78 84.22 45 6.89 Yes 33 1.14 Yes 0 0 No -20 0.79 Yes 45 54.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84380921 - NM_139076 FAM175A 0 . . . 1.18 67.34 25 5.56 Yes 13 1.08 Yes 0 0 No -24 0.91 Yes 44 59.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68596622 + NM_133509 RAD51B 0 . . . 3.85 82.47 30 5.38 No 37 -3.23 No 0 0 No -29 0.79 Yes 52 51.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89650306 + NM_000314 PTEN 0 . . . 4.42 82.16 38 6.18 Yes 3 0.92 Yes 0 0 No -38 0.54 No 42 68.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41263344 - NM_007294 BRCA1 0 . . . 0.72 77.77 18 5.54 No 33 1.16 Yes 0 0 No -24 0.63 No 25 51.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47727209 + NM_000251 MSH2 0 . . . 3.03 76.37 29 5.87 Yes 37 1.55 Yes 0 0 No -28 0.8 Yes 49 33.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89727141 + NM_000314 PTEN 0 . . . 6.51 76.62 28 5.03 No 11 1.48 Yes 0 0 No -26 0.49 No 47 76.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75488235 - NM_001040108 MLH3 0 . . . 0.29 74.94 25 5.32 No 37 0.72 No 0 0 No -25 0.36 No 33 51.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75506454 - NM_001040108 MLH3 0 . . . 9.19 79.05 25 5 No 69 0.43 No 0 0 No -24 0.69 Yes 26 86.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68296391 + NM_133509 RAD51B 0 . . . 6.08 80.57 18 3.59 No -2 0.86 Yes 0 0 No -35 0.89 Yes 42 93.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215651422 - NM_000465 BARD1 0 . . . 3.92 0 56 7.05 Yes 43 0.06 No 0 0 No -24 0.65 No 44 84.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41247596 - NM_007294 BRCA1 0 . . . 3.15 83.78 50 7.07 Yes 43 2.11 Yes 0 0 No -20 0.77 Yes 19 84.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69024701 + NM_133509 RAD51B 0 . . . 1.61 66.7 32 7.55 Yes 46 -3.9 No 0 0 No -24 0.49 No 13 24.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68493075 + NM_133509 RAD51B 0 . . . 1.78 0 14 6.34 Yes 66 -2.7 No 0 0 No -26 0.59 No 55 45.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131967442 + NM_005732 RAD50 0 . . . 4.55 84 51 8.24 Yes 2 1.33 Yes 0 0 No -23 0.83 Yes 48 48.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69034813 + NM_133509 RAD51B 0 . . . 1.59 74.17 9 5.39 No 71 -5.23 No 0 0 No -22 0.45 No 53 49.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68371122 + NM_133509 RAD51B 0 . . . 4.51 65.83 23 3.49 No 40 1.11 Yes 0 0 No -22 0.74 Yes 40 70.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37066142 + NM_000249 MLH1 0 . . . 0.42 0 21 5.09 No 48 0.84 Yes 0 0 No -20 0.77 Yes 48 40.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68861384 + NM_004360 CDH1 0 . . . 4.81 73.22 49 6.18 Yes 61 0.46 No 0 0 No -21 0.56 No 41 42.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108228379 + NM_000051 ATM 0 . . . 1.05 70.05 14 4.12 No 7 2.15 Yes 0 0 No -21 0.48 No 38 74.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68542173 + NM_133509 RAD51B 0 . . . 2.41 81.85 47 7.69 Yes 16 -1.43 No 0 0 No -34 0.5 No 42 84.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215652391 - NM_000465 BARD1 0 . . . 3.08 72.9 12 3.38 No 38 1.06 Yes 0 0 No -52 0.69 Yes 41 64.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68464535 + NM_133509 RAD51B 0 . . . 9.25 85.19 14 5.74 Yes 21 1.76 Yes 0 0 No -34 0.34 No 37 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131927209 + NM_005732 RAD50 0 . . . 3.98 72.35 17 4.09 No 0 0.81 Yes 0 0 No -23 0.59 No 47 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69146894 + NM_133509 RAD51B 0 . . . 5.53 74.55 31 6.19 Yes 1 1.2 Yes 0 0 No -30 0.5 No 48 73.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108114226 + NM_000051 ATM 0 . . . 4.77 74.78 29 4.86 No 65 1.12 Yes 0 0 No -22 0.75 Yes 37 64.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68589400 + NM_133509 RAD51B 0 . . . 0.36 75.84 36 5.92 Yes 66 -3.86 No 0 0 No -25 0.59 No 54 57.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47672321 + NM_000251 MSH2 0 . . . 2.47 62.09 18 7 Yes -1 0.16 No 0 0 No -17 0.6 No 41 32.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215631031 - NM_000465 BARD1 0 . . . 1.91 64.72 17 4.8 No 67 0.39 No 0 0 No -16 0.4 No 39 53.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108148158 + NM_000051 ATM 0 . . . 4.02 73.89 24 6.78 Yes 69 0.33 No 0 0 No -26 0.55 No 42 74.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68643970 + NM_133509 RAD51B 0 . . . 5.43 80.53 25 5 No 37 1.09 Yes 0 0 No -20 0.39 No 48 52.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108194800 + NM_000051 ATM 0 . . . 0.5 58.9 34 5.75 Yes 66 0.06 No 0 0 No -33 0.38 No 48 51.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6014233 - NM_000535 PMS2 0 . . . 5.78 81.92 15 5.39 No 1 0.6 No 0 0 No -49 0.48 No 42 77.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68481239 + NM_133509 RAD51B 0 . . . 0.67 77.02 13 4.72 No 50 -1.83 No 0 0 No -36 0.41 No 42 72.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68864873 + NM_004360 CDH1 0 . . . 2.46 77.52 18 4.8 No 3 0.06 No 0 0 No -49 0.47 No 54 81.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108146973 + NM_000051 ATM 0 . . . 4.13 70.48 23 5.39 No 48 1.25 Yes 0 0 No -22 0.36 No 42 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47781861 + NM_000251 MSH2 0 . . . 6.27 77.61 21 5.94 Yes 4 1.8 Yes 0 0 No -20 0.65 No 54 54.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69106256 + NM_133509 RAD51B 0 . . . 1.23 73.52 35 4.14 No -4 0.06 No 0 0 No -30 0.72 Yes 15 36.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68603879 + NM_133509 RAD51B 0 . . . 1 77.5 21 3.82 No 53 0.75 No 0 0 No -20 0.59 No 47 79.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47631311 + NM_000251 MSH2 0 . . . 10.51 85.27 11 5.28 No 26 1.92 Yes 0 0 No -30 0.47 No 32 94.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108224885 + NM_000051 ATM 0 . . . 2.46 73.16 18 5.51 No 35 -3.99 No 0 0 No -18 0.39 No 49 66.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108196444 + NM_000051 ATM 0 . . . 1.66 72.26 17 5.83 Yes -3 0.78 Yes 0 0 No -19 0.38 No 33 51.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94199050 - NM_005591 MRE11 0 . . . 5.81 79.3 28 6.95 Yes 54 1.23 Yes 0 0 No -27 0.94 Yes 49 66.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68455423 + NM_133509 RAD51B 0 . . . 3.1 72.23 12 4.57 No 74 0.62 No 0 0 No -24 0.41 No 49 83.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68302581 + NM_133509 RAD51B 0 . . . 0.2 56.4 15 5.83 Yes 17 0.39 No 0 0 No -29 0.78 Yes 41 26.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29127902 - NM_001005735 CHEK2 0 . . . 1.8 0 36 5.62 Yes 54 0.45 No 0 0 No -31 0.88 Yes 44 31.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59765869 - NM_032043 BRIP1 0 . . . 4.79 71.22 35 8.35 Yes 42 0.83 Yes 0 0 No -25 0.54 No 16 57.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47704283 + NM_000251 MSH2 0 . . . 7.64 80.64 28 5.37 No 64 0.36 No 0 0 No -22 0.69 Yes 35 66.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131938209 + NM_005732 RAD50 0 . . . 3.88 67.75 20 4.49 No 14 1.09 Yes 0 0 No -19 0.89 Yes 44 86.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69033297 + NM_133509 RAD51B 0 . . . 3 76.87 21 7.21 Yes 52 0.39 No 0 0 No -20 0.77 Yes 48 54.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68826223 + NM_133509 RAD51B 0 . . . 0.81 0 26 3.82 No 30 0.01 No 0 0 No -21 0.33 No 42 47.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59924056 - NM_032043 BRIP1 0 . . . 2.8 60.45 37 6.84 Yes 44 0.09 No 0 0 No -23 0.73 Yes 44 46.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68341984 + NM_133509 RAD51B 0 . . . 2.56 64.82 31 5.47 No 76 -5.84 No 0 0 No -24 0.76 Yes 40 47.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215633795 - NM_000465 BARD1 0 . . . 7.55 82.76 41 7.2 Yes 38 0.5 No 0 0 No -26 0.57 No 51 55.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68885621 + NM_133509 RAD51B 0 . . . 0.16 58.86 21 6.56 Yes 64 -1.76 No 0 0 No -23 0.89 Yes 41 43.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48022980 + NM_000179 MSH6 0 . . . 1.94 80.49 28 5.83 Yes 47 -5.43 No 0 0 No -27 0.83 Yes 53 61.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29098123 - NM_001005735 CHEK2 0 . . . 0.86 65.43 27 6.08 Yes 44 0.57 No 0 0 No -26 0.52 No 44 24.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68864791 + NM_133509 RAD51B 0 . . . 1.37 62.01 26 7.17 Yes 15 0.73 No 0 0 No -26 0.37 No 43 68.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131894776 + NM_005732 RAD50 0 . . . 6.21 81.01 42 7.4 Yes 5 0.63 No 0 0 No -41 0.68 Yes 48 41.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68652585 + NM_133509 RAD51B 0 . . . 4.03 0 28 5.29 No 52 1.73 Yes 0 0 No -24 0.41 No 39 70.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68824232 + NM_133509 RAD51B 0 . . . 0.59 75.83 19 4.29 No 51 1.38 Yes 0 0 No -19 0.67 Yes 48 36.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68569758 + NM_133509 RAD51B 0 . . . 0.09 70.66 21 4.58 No -4 0.18 No 0 0 No -20 0.62 No 50 56.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69094658 + NM_133509 RAD51B 0 . . . 0.37 68.7 17 5.29 No 69 0.59 No 0 0 No -21 0.61 No 39 70.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105179686 + NM_021930 RINT1 0 . . . 4.95 79.05 42 5.93 Yes 53 1.5 Yes 0 0 No -31 0.81 Yes 47 66.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131902058 + NM_005732 RAD50 0 . . . 2.53 57.23 29 7.48 Yes 12 0.43 No 0 0 No -28 0.73 Yes 37 39.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21987629 - NM_000077 CDKN2A 0 . . . 1.12 0 34 5.56 Yes 75 0.01 No 0 0 No -26 0.6 No 27 34.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190704411 + NM_000534 PMS1 0 . . . 2.88 63.8 40 7.55 Yes 31 1.22 Yes 0 0 No -39 0.89 Yes 27 73.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84380528 - NM_139076 FAM175A 0 . . . 0.41 0 24 4.96 No 35 0.66 No 0 0 No -23 0.93 Yes 52 56.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47792192 + NM_000251 MSH2 0 . . . 3.19 74.78 18 6.46 Yes 8 1.17 Yes 0 0 No -28 0.6 No 50 77.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108101322 + NM_000051 ATM 0 . . . 1.85 69.54 21 5.02 No 13 1.16 Yes 0 0 No -20 0.55 No 31 77.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32971010 + NM_000059 BRCA2 0 . . . 0.54 66.54 15 4.12 No 74 0.3 No 23 0.68 Yes -29 0.59 No 41 49.82 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 68309727 + NM_133509 RAD51B 0 . . . 2.62 81.34 22 3.6 No 31 1.02 Yes 0 0 No -24 0.67 Yes 27 52.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69079518 + NM_133509 RAD51B 0 . . . 1.5 64.93 25 6.08 Yes 24 0.25 No 0 0 No -19 0.45 No 30 58.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90949909 - NM_002485 NBN 0 . . . 9.73 87.67 39 6.55 Yes 71 -4.78 No 0 0 No -38 0.79 Yes 46 69.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59936660 - NM_032043 BRIP1 0 . . . 1.71 71.54 20 4.2 No 65 -4.8 No 0 0 No -19 0.34 No 44 45.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47655077 + NM_000251 MSH2 0 . . . 5.74 85.11 13 4.9 No 1 0.88 Yes 0 0 No -41 0.41 No 53 60.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68954459 + NM_133509 RAD51B 0 . . . 1.51 69.57 37 6.85 Yes 56 0.55 No 0 0 No -36 0.52 No 57 32.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69118684 + NM_133509 RAD51B 0 . . . 0.48 68.17 22 6.85 Yes 62 -2.97 No 0 0 No -21 0.96 Yes 45 45.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68397682 + NM_133509 RAD51B 0 . . . 4.34 84.95 15 4.58 No 67 0.31 No 0 0 No -48 0.48 No 17 64.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68807937 + NM_133509 RAD51B 0 . . . 0.92 59.43 22 3.91 No 73 0.4 No 0 0 No -20 0.69 Yes 47 54.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105201396 + NM_021930 RINT1 0 . . . 2.71 75.3 31 4.37 No 51 1.85 Yes 0 0 No -30 0.89 Yes 56 43.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59895074 - NM_032043 BRIP1 0 . . . 3.53 73.69 28 5.39 No 42 1.57 Yes 0 0 No -27 0.62 No 45 56.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131958545 + NM_005732 RAD50 0 . . . 0.34 78.73 21 5.65 Yes 18 1.58 Yes 0 0 No -20 0.8 Yes 24 53.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69022493 + NM_133509 RAD51B 0 . . . 1.17 72.39 19 4.98 No -4 0.72 No 0 0 No -18 0.61 No 49 32.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68343703 + NM_133509 RAD51B 0 . . . 2.81 70.17 22 5 No 5 0.38 No 0 0 No -21 0.62 No 53 81.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37075657 + NM_000249 MLH1 0 . . . 1.05 74.88 21 3.97 No 31 0.64 No 0 0 No -20 0.64 No 16 90.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215630325 - NM_000465 BARD1 0 . . . 5.74 0 22 5.23 No 37 1.44 Yes 0 0 No -21 0.63 No 53 90.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59838439 - NM_032043 BRIP1 0 . . . 7.22 87.34 27 4.88 No 6 0.89 Yes 0 0 No -26 0.66 No 42 63.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108162480 + NM_000051 ATM 0 . . . 3.68 0 20 4.58 No 64 0.04 No 0 0 No -23 0.41 No 45 34.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68411763 + NM_133509 RAD51B 0 . . . 5.12 78.85 28 4.68 No 18 0.27 No 0 0 No -27 0.79 Yes 36 78.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59918949 - NM_032043 BRIP1 0 . . . 5.17 73.63 10 4.69 No 8 1.17 Yes 0 0 No -46 0.37 No 50 69.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90998409 - NM_002485 NBN 0 . . . 7.63 80.04 22 5 No 52 0.7 No 0 0 No -21 0.92 Yes 45 85.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68691997 + NM_133509 RAD51B 0 . . . 5.45 69.9 20 5.07 No 53 0.96 Yes 0 0 No -19 0.54 No 37 57.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89720204 + NM_000314 PTEN 0 . . . 0.18 66.61 22 4.49 No 60 1.15 Yes 0 0 No -21 0.73 Yes 42 34.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68365804 + NM_133509 RAD51B 0 . . . 4.31 84.95 35 7.21 Yes 58 0.79 Yes 0 0 No -35 0.66 Yes 17 89.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68862325 + NM_004360 CDH1 0 . . . 5.69 85.37 25 5.57 Yes 73 1.05 Yes 0 0 No -43 0.37 No 47 58.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68811705 + NM_004360 CDH1 0 . . . 1.47 70.61 26 5.66 Yes 28 1.46 Yes 0 0 No -25 0.73 Yes 54 71.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68827218 + NM_133509 RAD51B 0 . . . 2.77 76.6 15 5.7 Yes 61 -5.75 No 0 0 No -28 0.33 No 44 79.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47697516 + NM_000251 MSH2 0 . . . 3.72 91.05 28 5.2 No 44 1 Yes 0 0 No -27 0.57 No 22 83.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68950389 + NM_133509 RAD51B 0 . . . 6.17 85.85 29 5.39 No 23 0.37 No 0 0 No -29 0.72 Yes 49 86.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94161209 - NM_005591 MRE11 0 . . . 6.02 68.47 13 4.9 No 65 0.01 No 0 0 No -28 0.5 No 35 78.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215615141 - NM_000465 BARD1 0 . . . 1.56 64.37 17 4.8 No 1 0.85 Yes 0 0 No -18 0.64 No 40 33.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190665529 + NM_000534 PMS1 0 . . . 4.49 67.6 19 4.8 No 12 0.27 No 0 0 No -16 0.54 No 46 61.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47665192 + NM_000251 MSH2 0 . . . 5.24 78.03 34 6.32 Yes 12 1.57 Yes 0 0 No -33 0.62 No 37 70.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68915525 + NM_133509 RAD51B 0 . . . 4.76 78.74 20 4.87 No 23 0.59 No 0 0 No -19 0.35 No 52 58.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131979605 + NM_005732 RAD50 0 . . . 1.1 56.08 10 4.66 No 44 0.24 No 0 0 No -18 0.18 No 46 53.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59794646 - NM_032043 BRIP1 0 . . . 1.32 71.19 33 6.41 Yes 58 -4.73 No 0 0 No -32 0.51 No 51 31.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47703926 + NM_000251 MSH2 0 . . . 4.42 77.82 29 4.38 No 11 0.35 No 0 0 No -28 0.8 Yes 47 75.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89633798 + NM_000314 PTEN 0 . . . 5.78 76.3 16 5.27 No 12 1.05 Yes 0 0 No -28 0.41 No 46 56.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41265086 - NM_007294 BRCA1 0 . . . 2.88 70.59 22 6.85 Yes 4 1.68 Yes 0 0 No -21 0.91 Yes 54 78.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68849423 + NM_133509 RAD51B 0 . . . 4.75 77.26 23 4.94 No 55 0.31 No 0 0 No -22 0.75 Yes 38 46.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190739956 + NM_000534 PMS1 0 . . . 0.44 63.58 43 6.6 Yes 74 -2.65 No 0 0 No -38 0.38 No 52 30.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215603944 - NM_000465 BARD1 0 . . . 1.4 63.73 13 4.84 No 45 0.92 Yes 0 0 No -35 0.48 No 20 62.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84402431 - NM_139076 FAM175A 0 . . . 6.7 71.25 33 5.74 Yes 2 0.19 No 0 0 No -26 0.64 No 43 77.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48035692 + NM_000179 MSH6 0 . . . 4.03 84.75 38 3.71 No 34 1.3 Yes 0 0 No -25 0.43 No 47 28.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68908614 + NM_133509 RAD51B 0 . . . 7.3 68.21 17 6.32 Yes -4 0.65 No 0 0 No -19 0.59 No 49 40.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32960516 + NM_000059 BRCA2 0 . . . 0.09 76.63 15 3.5 No 67 -4.97 No 0 0 No -18 0.58 No 48 47.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32946887 + NM_000059 BRCA2 0 . . . 7.02 82.77 34 5.44 No 3 0.68 No 0 0 No -22 0.61 No 38 69.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21968740 - NM_000077 CDKN2A 0 . . . 4.33 76.07 35 6.08 Yes 42 0.25 No 0 0 No -34 0.91 Yes 44 82.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41232655 - NM_007294 BRCA1 0 . . . 8.82 86.87 12 4.69 No 11 1.27 Yes 0 0 No -19 0.47 No 47 90.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68611985 + NM_133509 RAD51B 0 . . . 0.85 66.23 39 6 Yes 51 2.15 Yes 0 0 No -32 0.67 Yes 35 73.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68936540 + NM_133509 RAD51B 0 . . . 3.72 89.94 20 5.64 Yes 48 -3.38 No 0 0 No -20 0.58 No 46 66.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105185871 + NM_021930 RINT1 0 . . . 2.97 76.63 19 5.93 Yes 59 -4.07 No 0 0 No -23 0.6 No 50 49.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68908011 + NM_133509 RAD51B 0 . . . 0.09 74.68 28 5.66 Yes 57 0.58 No 0 0 No -27 0.52 No 54 77.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69010497 + NM_133509 RAD51B 0 . . . 2.63 72.65 14 5.26 No 65 0.45 No 0 0 No -37 0.48 No 50 62.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89662978 + NM_000314 PTEN 0 . . . 2 73.62 18 6.01 Yes 59 -3.36 No 0 0 No -24 0.4 No 54 23.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69045255 + NM_133509 RAD51B 0 . . . 3.55 66.67 26 8.59 Yes 62 -2.39 No 0 0 No -25 0.86 Yes 46 95.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68944963 + NM_133509 RAD51B 0 . . . 2.97 78.61 36 6.01 Yes -4 0.06 No 0 0 No -24 0.49 No 55 41.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68308129 + NM_133509 RAD51B 0 . . . 4.96 91.21 36 6.77 Yes 9 0.71 No 0 0 No -35 0.94 Yes 49 52.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68509587 + NM_133509 RAD51B 0 . . . 2.84 70.2 17 4.75 No 55 -3.25 No 0 0 No -23 0.9 Yes 41 50.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152363749 - NM_005431 XRCC2 0 . . . 2.99 76.63 29 6.32 Yes 67 -5.67 No 0 0 No -28 0.9 Yes 48 76.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68402299 + NM_133509 RAD51B 0 . . . 1.85 0 19 5.15 No 40 0.74 No 0 0 No -27 0.88 Yes 18 90.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104176179 - NM_001100119 XRCC3 0 . . . 1.41 74.84 13 4.65 No 25 -2.38 No 0 0 No -23 0.82 Yes 53 40.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68980529 + NM_133509 RAD51B 0 . . . 3.23 61.88 27 5.67 Yes 73 0.58 No 0 0 No -27 0.43 No 39 78.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89654286 + NM_000314 PTEN 0 . . . 1.32 65.26 24 4.35 No 22 1 Yes 0 0 No -23 0.48 No 36 94.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59922585 - NM_032043 BRIP1 0 . . . 2.53 71.54 20 4.69 No 19 0.2 No 0 0 No -20 0.49 No 32 78.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68864728 + NM_004360 CDH1 0 . . . 0.28 0 28 5.38 No 76 -2.52 No 0 0 No -24 0.34 No 29 63.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68977811 + NM_133509 RAD51B 0 . . . 0.74 70.85 17 6.07 Yes 75 0.23 No 0 0 No -16 0.69 Yes 40 73.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29087631 - NM_001005735 CHEK2 0 . . . 2.62 67.03 27 4.61 No 63 0.32 No 0 0 No -27 0.5 No 43 61.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40989623 + NM_001164269 RAD51 0 . . . 1.75 62.95 31 6.93 Yes 71 0.76 No 0 0 No -30 0.65 No 57 27.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68856321 + NM_004360 CDH1 0 . . . 6.2 75.28 17 4.52 No 67 1.46 Yes 0 0 No -43 0.86 Yes 33 88.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108177713 + NM_000051 ATM 0 . . . 5.78 80.03 19 4.24 No 38 1.13 Yes 0 0 No -22 0.92 Yes 49 41.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108096784 + NM_000051 ATM 0 . . . 9.77 92.04 32 5.09 No 38 -2.31 No 0 0 No -32 0.59 No 39 67.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59758278 - NM_032043 BRIP1 0 . . . 2.97 70.59 16 7.28 Yes 15 0.7 No 0 0 No -31 0.72 Yes 38 63.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68862609 + NM_004360 CDH1 0 . . . 2.58 0 27 7.38 Yes 72 0.95 Yes 0 0 No -26 0.64 No 37 61.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41235673 - NM_007294 BRCA1 0 . . . 10.73 90.03 33 6.15 Yes 43 1.29 Yes 0 0 No -25 0.74 Yes 36 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68521259 + NM_133509 RAD51B 0 . . . 7.29 85.6 29 7.28 Yes 27 1.31 Yes 0 0 No -28 0.94 Yes 23 58.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21993030 - NM_000077 CDKN2A 0 . . . 3.75 0 32 6.72 Yes 44 0.9 Yes 0 0 No -31 0.82 Yes 53 52.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41247697 - NM_007294 BRCA1 0 . . . 4.89 68.66 13 6.59 Yes 58 -2.33 No 0 0 No -12 0.61 No 36 86.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105179313 + NM_021930 RINT1 0 . . . 2.94 80.06 14 5.08 No 56 1.36 Yes 0 0 No -24 0.86 Yes 42 80.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84395218 - NM_139076 FAM175A 0 . . . 5.29 86.88 22 5.07 No 53 1.47 Yes 0 0 No -21 0.61 No 48 85.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68651933 + NM_133509 RAD51B 0 . . . 0.87 68.8 21 7.6 Yes 24 0.24 No 0 0 No -25 0.5 No 48 82.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68830523 + NM_004360 CDH1 0 . . . 0.86 74.44 34 6.08 Yes 19 0.04 No 0 0 No -33 0.67 Yes 36 61.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68843726 + NM_004360 CDH1 0 . . . 3.57 80.47 31 6.43 Yes 52 0.35 No 0 0 No -34 0.67 Yes 48 81.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105177708 + NM_021930 RINT1 0 . . . 2.97 0 39 6.59 Yes 45 1.12 Yes 0 0 No -31 0.51 No 56 37.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68577169 + NM_133509 RAD51B 0 . . . 5.64 72.05 28 6.48 Yes 42 0.99 Yes 0 0 No -27 0.9 Yes 43 86.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41001172 + NM_001164269 RAD51 0 . . . 2.51 83.39 21 4.79 No 19 0.51 No 0 0 No -20 0.88 Yes 48 51.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68519886 + NM_133509 RAD51B 0 . . . 1.54 0 20 5 No 4 0.95 Yes 0 0 No -25 0.71 Yes 54 53.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108112652 + NM_000051 ATM 0 . . . 6.9 85.31 32 6.16 Yes 3 1.41 Yes 0 0 No -31 0.78 Yes 44 87.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6015840 - NM_000535 PMS2 0 . . . 6.17 78.18 27 5.16 No 41 0.3 No 0 0 No -20 0.51 No 21 48.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59856773 - NM_032043 BRIP1 0 . . . 5.56 85.84 19 4.67 No 34 -1.85 No 0 0 No -23 0.66 Yes 53 41.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56771886 + NM_058216 RAD51C 0 . . . 3.74 80.85 38 5.85 Yes 36 1.07 Yes 0 0 No -37 0.3 No 17 90.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68431306 + NM_133509 RAD51B 0 . . . 9.03 80.32 35 5.99 Yes 31 1.13 Yes 0 0 No -34 0.53 No 27 56.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89715926 + NM_000314 PTEN 0 . . . 4.16 84.13 69 9.36 Yes 0 0.48 No 0 0 No -26 0.7 Yes 42 88.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68730826 + NM_133509 RAD51B 0 . . . 9.96 85.2 14 3.92 No 18 1.36 Yes 0 0 No -23 0.81 Yes 40 93.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68375332 + NM_133509 RAD51B 0 . . . 1.38 0 15 4.58 No 65 -3.96 No 0 0 No -54 0.39 No 45 86.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68810634 + NM_004360 CDH1 0 . . . 6.32 82.91 38 5.1 No 4 0.11 No 0 0 No -32 0.68 Yes 51 75.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68832402 + NM_004360 CDH1 0 . . . 1.8 74.58 23 4.45 No 73 0.11 No 0 0 No -30 0.73 Yes 51 75.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32903899 + NM_000059 BRCA2 0 . . . 3.08 65.33 16 5.02 No 35 -2.51 No 0 0 No -20 0.79 Yes 23 84.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33441392 - NM_002878 RAD51D 0 . . . 1.31 0 18 5.05 No 48 -2.13 No 0 0 No -27 0.66 No 45 46.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94215666 - NM_005591 MRE11 0 . . . 0.98 0 52 7.66 Yes 29 2.02 Yes 0 0 No -51 0.54 No 29 97.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108166595 + NM_000051 ATM 0 . . . 0.88 74.73 28 5.38 No 37 1.28 Yes 0 0 No -27 0.42 No 21 92.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68839616 + NM_004360 CDH1 0 . . . 1.73 86.71 11 4.85 No 33 0.98 Yes 0 0 No -24 0.36 No 50 42.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89661113 + NM_000314 PTEN 0 . . . 3.23 83.74 26 5.14 No 58 0.49 No 0 0 No -25 0.75 Yes 50 67.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47646136 + NM_000251 MSH2 0 . . . 5.94 88.94 39 7.83 Yes 75 -5.31 No 0 0 No -38 0.35 No 53 17.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68371217 + NM_133509 RAD51B 0 . . . 5.4 73.72 9 3.87 No 44 1.13 Yes 0 0 No -32 0.8 Yes 41 64.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47650063 + NM_000251 MSH2 0 . . . 1.43 0 27 5.74 Yes 53 0.47 No 0 0 No -26 0.66 Yes 41 64.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68633917 + NM_133509 RAD51B 0 . . . 6.11 78.6 25 6.08 Yes 7 1.1 Yes 0 0 No -28 0.5 No 48 46.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69113309 + NM_133509 RAD51B 0 . . . 11.13 82.18 21 5.06 No 14 0.76 No 0 0 No -20 0.6 No 44 82.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68379919 + NM_133509 RAD51B 0 . . . 5.15 71.63 65 9.4 Yes 60 1.51 Yes 0 0 No -20 0.56 No 38 80.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68838973 + NM_133509 RAD51B 0 . . . 2.95 69.85 15 5.2 No 76 -4.37 No 0 0 No -24 0.61 No 49 44.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41015497 + NM_001164269 RAD51 0 . . . 0.05 65.12 21 5.2 No 51 -0.89 No 0 0 No -20 0.73 Yes 30 31.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68908755 + NM_133509 RAD51B 0 . . . 3.16 79.34 16 3.18 No 73 0.96 Yes 0 0 No -32 0.73 Yes 44 55.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32907677 + NM_000059 BRCA2 0 . . . 4.55 83.76 23 5.01 No 51 0.17 No 0 0 No -28 0.63 No 43 34.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68339267 + NM_133509 RAD51B 0 . . . 3.02 70.35 22 5.1 No 6 0.14 No 0 0 No -21 0.95 Yes 44 89.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94181521 - NM_005591 MRE11 0 . . . 2.37 73.27 18 4.46 No 6 2.16 Yes 0 0 No -25 0.49 No 52 79.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59790929 - NM_032043 BRIP1 0 . . . 2.3 76.63 10 5.29 No 15 0.33 No 0 0 No -41 0.56 No 43 54.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68537142 + NM_133509 RAD51B 0 . . . 2.39 75.78 24 5 No 54 0.43 No 0 0 No -23 0.86 Yes 46 68.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68925545 + NM_133509 RAD51B 0 . . . 3.96 73.51 11 5 No 60 1.23 Yes 0 0 No -42 0.31 No 44 77.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41019413 + NM_001164269 RAD51 0 . . . 0.97 80.53 23 5.27 No 13 0.61 No 0 0 No -22 0.79 Yes 50 78.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41011438 + NM_001164269 RAD51 0 . . . 5.2 85.02 22 4.88 No 5 1.09 Yes 0 0 No -21 0.71 Yes 53 72.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68870476 + NM_004360 CDH1 0 . . . 0.93 0 17 5.57 Yes 12 0.92 Yes 0 0 No -24 0.73 Yes 39 87.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131930893 + NM_005732 RAD50 0 . . . 5.43 77.5 23 4.19 No 40 1.07 Yes 22 0.86 Yes -19 0.56 No 46 65.26 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 6045907 - NM_000535 PMS2 0 . . . 5.14 63.69 22 6.06 Yes 67 -1.16 No 0 0 No -27 0.36 No 41 72.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47695444 + NM_000251 MSH2 0 . . . 4.95 86.81 20 7.14 Yes 7 0.84 Yes 0 0 No -19 0.74 Yes 51 88.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29111545 - NM_001005735 CHEK2 0 . . . 2.63 70.26 83 7.13 Yes 55 1.23 Yes 0 0 No -18 0.58 No 43 71.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37073463 + NM_000249 MLH1 0 . . . 3.69 74.14 16 6.36 Yes 27 1.07 Yes 0 0 No -31 0.46 No 42 96.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59915541 - NM_032043 BRIP1 0 . . . 2.71 80.61 14 5.2 No 68 0.96 Yes 0 0 No -20 0.51 No 54 41.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68763297 + NM_133509 RAD51B 0 . . . 3.43 71.1 17 4.8 No 69 1.13 Yes 0 0 No -32 0.78 Yes 47 81.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68690668 + NM_133509 RAD51B 0 . . . 2.25 65.42 16 4.3 No 35 1.05 Yes 0 0 No -22 0.42 No 50 65.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89626816 + NM_000314 PTEN 0 . . . 4.44 69.94 45 8.92 Yes 59 1.48 Yes 0 0 No -24 0.83 Yes 40 84.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68533192 + NM_133509 RAD51B 0 . . . 3.62 84.02 23 3.48 No 47 1.47 Yes 0 0 No -23 0.41 No 11 74.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68341230 + NM_133509 RAD51B 0 . . . 2.71 69.21 29 5.86 Yes 68 -2.86 No 0 0 No -28 0.79 Yes 40 77.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108191680 + NM_000051 ATM 0 . . . 1.47 63.25 31 6.07 Yes 73 0.99 Yes 0 0 No -34 0.71 Yes 55 22.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29121957 - NM_001005735 CHEK2 0 . . . 2.38 83.06 20 4.36 No 11 1.66 Yes 0 0 No -34 0.62 No 47 78.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68491957 + NM_133509 RAD51B 0 . . . 4.26 71.42 84 9.43 Yes 63 0.45 No 0 0 No -24 0.77 Yes 44 44.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47687751 + NM_000251 MSH2 0 . . . 7.55 80.88 16 5.39 No 7 0.93 Yes 0 0 No -24 0.45 No 48 64.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68522081 + NM_133509 RAD51B 0 . . . 7.48 82.95 23 5.81 Yes 59 0.44 No 0 0 No -22 0.9 Yes 45 91.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29097986 - NM_001005735 CHEK2 0 . . . 2.39 76.63 24 7.02 Yes 67 -6.42 No 0 0 No -23 0.84 Yes 48 60.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29084024 - NM_001005735 CHEK2 0 . . . 0.05 70.93 36 6.28 Yes 65 0.8 Yes 0 0 No -19 0.48 No 48 64.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47693266 + NM_000251 MSH2 0 . . . 1.04 0 51 6.93 Yes 69 1.57 Yes 0 0 No -39 0.53 No 46 80.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108101523 + NM_000051 ATM 0 . . . 4.9 86.2 26 4.51 No 9 1.12 Yes 0 0 No -25 0.85 Yes 49 94.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1217710 + NM_000455 STK11 0 . . . 3.75 72.29 18 5.57 Yes 9 1.02 Yes 0 0 No -29 0.51 No 49 76.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68846083 + NM_004360 CDH1 0 . . . 3.73 77.66 18 4.9 No -3 1.46 Yes 0 0 No -25 0.63 No 22 42.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29114703 - NM_001005735 CHEK2 0 . . . 4.91 80.91 25 4.42 No 7 1.16 Yes 0 0 No -31 0.74 Yes 51 87.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68964596 + NM_133509 RAD51B 0 . . . 2.55 85.09 48 7.28 Yes 73 0.06 No 0 0 No -33 0.7 Yes 35 55.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68584197 + NM_133509 RAD51B 0 . . . 6.44 83.43 16 4.69 No 74 -4.98 No 0 0 No -49 0.4 No 43 90.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68608726 + NM_133509 RAD51B 0 . . . 1.64 85.86 52 7.11 Yes 50 0.63 No 0 0 No -36 0.62 No 48 95.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94192876 - NM_005591 MRE11 0 . . . 2.15 68.51 22 4.58 No 52 1.2 Yes 0 0 No -21 0.83 Yes 41 92.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40985475 + NM_001164269 RAD51 0 . . . 3.85 84.41 21 5 No 9 1.48 Yes 0 0 No -20 0.88 Yes 49 86.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68953504 + NM_133509 RAD51B 0 . . . 1.92 67.93 41 6.88 Yes 20 1.59 Yes 0 0 No -23 0.49 No 38 85.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68796450 + NM_133509 RAD51B 0 . . . 0.61 74.47 48 6.62 Yes 4 0.41 No 0 0 No -30 0.94 Yes 17 51.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152364338 - NM_005431 XRCC2 0 . . . 3.68 66.32 23 5.73 Yes 61 0.64 No 0 0 No -22 0.6 No 39 51.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215657929 - NM_000465 BARD1 0 . . . 1.39 66.17 42 7.94 Yes 49 -1.72 No 0 0 No -41 0.39 No 25 76.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90969967 - NM_002485 NBN 0 . . . 5.02 76.24 50 7.12 Yes -3 0.6 No 0 0 No -22 0.38 No 40 91.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68655462 + NM_133509 RAD51B 0 . . . 5.64 78 19 4.38 No 64 1.09 Yes 0 0 No -18 0.45 No 48 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69099150 + NM_133509 RAD51B 0 . . . 5.31 73.23 29 5.56 Yes 72 1.02 Yes 0 0 No -28 0.78 Yes 46 41.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68409577 + NM_133509 RAD51B 0 . . . 1.96 71.79 17 4.44 No 11 0.91 Yes 0 0 No -43 0.84 Yes 31 64.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40999965 + NM_001164269 RAD51 0 . . . 1.54 0 23 4.48 No 21 -1.51 No 0 0 No -25 0.84 Yes 38 47.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190650178 + NM_000534 PMS1 0 . . . 4.41 81.03 27 5.19 No 73 0.54 No 0 0 No -26 0.62 No 51 80.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89636830 + NM_000314 PTEN 0 . . . 6.18 74.68 15 5.83 Yes 67 -3.69 No 0 0 No -27 0.47 No 36 45.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56785885 + NM_058216 RAD51C 0 . . . 0.15 65.16 20 5.32 No 68 -4.89 No 0 0 No -19 0.28 No 50 47.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59877570 - NM_032043 BRIP1 0 . . . 1.6 76.61 22 5.23 No 27 0.92 Yes 0 0 No -21 0.43 No 46 66.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89686075 + NM_000314 PTEN 0 . . . 3.9 70.47 50 7.11 Yes 51 0.83 Yes 0 0 No -28 0.54 No 42 41.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89729012 + NM_000314 PTEN 0 . . . 2.5 65.6 21 4.47 No 37 0.01 No 0 0 No -23 0.51 No 29 79.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68816701 + NM_004360 CDH1 0 . . . 7.99 83.65 16 4.69 No 62 1.63 Yes 0 0 No -22 0.65 No 34 81.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68860721 + NM_133509 RAD51B 0 . . . 5.61 76.75 16 5.62 Yes 57 0.61 No 0 0 No -30 0.48 No 44 50.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37072668 + NM_000249 MLH1 0 . . . 5.67 80.56 20 4.47 No 18 0.24 No 0 0 No -38 0.46 No 40 65.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23616231 - NM_024675 PALB2 0 . . . 3.6 85.02 36 5.87 Yes 4 1.05 Yes 0 0 No -35 0.51 No 54 72.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190734651 + NM_000534 PMS1 0 . . . 4.41 82.2 54 4.36 No 44 1.23 Yes 0 0 No -36 0.13 No 44 68.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32903880 + NM_000059 BRCA2 0 . . . 6.61 75.36 44 6.86 Yes 56 -2.37 No 0 0 No -38 0.46 No 42 96.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29109715 - NM_001005735 CHEK2 0 . . . 2.39 76.63 16 5.6 Yes 67 -5.45 No 0 0 No -58 0.66 No 43 76.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69126366 + NM_133509 RAD51B 0 . . . 2.38 74 29 7.35 Yes 58 -1.87 No 0 0 No -28 0.93 Yes 34 57.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90988023 - NM_002485 NBN 0 . . . 2.37 76.56 11 4.12 No 6 0.76 No 0 0 No -33 0.46 No 52 84.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108211376 + NM_000051 ATM 0 . . . 0.36 0 23 5.38 No 73 0.54 No 0 0 No -22 0.88 Yes 35 64.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32951831 + NM_000059 BRCA2 0 . . . 1.5 72.81 36 5.72 Yes 58 0.12 No 0 0 No -25 0.69 Yes 49 36.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69027160 + NM_133509 RAD51B 0 . . . 0.52 64.64 23 4.64 No 2 0.17 No 0 0 No -22 0.64 No 21 77.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68819813 + NM_004360 CDH1 0 . . . 0.79 0 34 5.92 Yes 27 0.76 No 0 0 No -33 0.77 Yes 40 54.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68881629 + NM_133509 RAD51B 0 . . . 1.87 65.69 21 5.17 No 69 1.07 Yes 0 0 No -20 0.65 No 42 34.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68856044 + NM_004360 CDH1 0 . . . 3.6 77.33 20 5.1 No 72 0.57 No 0 0 No -27 0.68 Yes 46 78.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94182704 - NM_005591 MRE11 0 . . . 0.37 76.63 19 4.58 No -3 0.13 No 0 0 No -18 0.84 Yes 61 39.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68392200 + NM_133509 RAD51B 0 . . . 2.45 74.26 25 6.25 Yes 33 1.16 Yes 0 0 No -34 0.49 No 25 43.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68858477 + NM_133509 RAD51B 0 . . . 0.38 76.11 18 4.7 No 50 -3.95 No 0 0 No -44 0.53 No 50 49.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33430646 - NM_002878 RAD51D 0 . . . 3.4 80.06 20 4.13 No 48 -1.91 No 0 0 No -18 0.51 No 30 73.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41230999 - NM_007294 BRCA1 0 . . . 6.21 82.31 9 3.87 No 58 1.02 Yes 0 0 No -54 0.72 Yes 31 63.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40994638 + NM_001164269 RAD51 0 . . . 0.87 60.99 21 3.45 No 57 0.36 No 0 0 No -56 0.61 No 52 47.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68851642 + NM_133509 RAD51B 0 . . . 5.22 85.37 37 6.07 Yes 75 1 Yes 0 0 No -23 0.87 Yes 54 82.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68666506 + NM_133509 RAD51B 0 . . . 0.37 69.08 31 5.35 No 38 1.14 Yes 0 0 No -30 0.64 No 45 51.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41231567 - NM_007294 BRCA1 0 . . . 1.04 71.92 27 5.84 Yes 75 1.35 Yes 0 0 No -23 0.62 No 43 74.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29115870 - NM_001005735 CHEK2 0 . . . 4.36 76.51 23 4.85 No 24 1.42 Yes 0 0 No -22 0.84 Yes 48 47.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90978876 - NM_002485 NBN 0 . . . 5.88 72.39 35 5.86 Yes 11 0.31 No 0 0 No -34 0.5 No 47 52.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56792947 + NM_058216 RAD51C 0 . . . 3.51 82.47 18 4.93 No 51 0.57 No 0 0 No -25 0.72 Yes 37 59.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29118828 - NM_001005735 CHEK2 0 . . . 2.05 81.66 15 5.48 No 41 -3.82 No 0 0 No -50 0.32 No 54 36.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68833958 + NM_133509 RAD51B 0 . . . 0.2 65.45 48 7.7 Yes 42 -3.98 No 0 0 No -39 0.57 No 42 47.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56800266 + NM_058216 RAD51C 0 . . . 4.83 75.96 39 5.72 Yes 65 1.54 Yes 0 0 No -38 0.52 No 44 87.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215630755 - NM_000465 BARD1 0 . . . 10.55 87.85 23 5.21 No 47 -2.36 No 0 0 No -22 0.54 No 45 65.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108239825 + NM_000051 ATM 0 . . . 0.02 61.97 32 6.44 Yes 28 0.49 No 0 0 No -31 0.74 Yes 35 67.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190665445 + NM_000534 PMS1 0 . . . 2.93 69.09 32 5.92 Yes 36 0.36 No 0 0 No -32 0.43 No 48 86.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41022582 + NM_001164269 RAD51 0 . . . 4.23 69.48 28 5.81 Yes 41 0.01 No 0 0 No -27 0.81 Yes 43 83.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89707324 + NM_000314 PTEN 0 . . . 3.54 71.97 26 5.47 No 54 1.01 Yes 0 0 No -25 0.85 Yes 48 66.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68452371 + NM_133509 RAD51B 0 . . . 3.24 72.98 18 4.87 No 54 1.12 Yes 0 0 No -22 0.47 No 52 44.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75514332 - NM_001040108 MLH3 0 . . . 2.23 59.26 13 4.92 No 73 -5.83 No 0 0 No -27 0.79 Yes 45 46.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68559175 + NM_133509 RAD51B 0 . . . 6.82 80.61 11 4.9 No 22 0.35 No 0 0 No -23 0.31 No 48 77.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68895498 + NM_133509 RAD51B 0 . . . 3.52 75.24 35 6.4 Yes 61 -5.71 No 0 0 No -34 0.9 Yes 39 24.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68908542 + NM_133509 RAD51B 0 . . . 2.14 73.43 22 6.03 Yes 34 0.37 No 0 0 No -21 0.95 Yes 50 46.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59799952 - NM_032043 BRIP1 0 . . . 0.3 60.34 23 4.86 No -3 0.55 No 0 0 No -22 0.56 No 42 56.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32893631 + NM_000059 BRCA2 0 . . . 5.31 75.54 29 5.83 Yes 64 0.15 No 0 0 No -28 0.91 Yes 50 62.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89654563 + NM_000314 PTEN 0 . . . 7.9 93.16 27 5.59 Yes 7 0.84 Yes 0 0 No -26 0.57 No 50 65.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68992460 + NM_133509 RAD51B 0 . . . 1.02 72.29 19 4.27 No 24 0.69 No 0 0 No -18 0.89 Yes 34 48.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47688500 + NM_000251 MSH2 0 . . . 3.18 73.87 24 4.99 No 41 0.76 No 0 0 No -23 0.52 No 17 56.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6019885 - NM_000535 PMS2 0 . . . 2.35 72.3 19 5.5 No 37 1.66 Yes 0 0 No -23 0.59 No 29 85.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105188293 + NM_021930 RINT1 0 . . . 1.08 84.22 36 6.22 Yes 33 1.17 Yes 0 0 No -25 0.5 No 51 38.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32911652 + NM_000059 BRCA2 0 . . . 1.95 68.58 84 9.27 Yes 76 -1.85 No 0 0 No -24 0.89 Yes 46 62.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105185197 + NM_021930 RINT1 0 . . . 3.35 74.25 32 5.74 Yes 75 1.78 Yes 0 0 No -28 0.47 No 46 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68646764 + NM_133509 RAD51B 0 . . . 1.59 74.05 26 6.86 Yes 9 -0.34 No 0 0 No -25 0.62 No 49 64.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37068460 + NM_000249 MLH1 0 . . . 3.12 81.51 21 5.72 Yes 36 0.74 No 0 0 No -24 0.4 No 47 85.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68556515 + NM_133509 RAD51B 0 . . . 2.81 69.97 16 6.67 Yes 56 0.38 No 0 0 No -32 0.56 No 37 70.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68902642 + NM_133509 RAD51B 0 . . . 0.49 67.55 24 5 No 71 0.88 Yes 0 0 No -23 0.61 No 52 53.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48033063 + NM_000179 MSH6 0 . . . 2.35 72.19 13 4.9 No 23 0.16 No 0 0 No -21 0.42 No 46 75.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105185455 + NM_021930 RINT1 0 . . . 2.52 84.45 68 9.13 Yes 28 1.39 Yes 0 0 No -31 0.48 No 50 48.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108149763 + NM_000051 ATM 0 . . . 0.85 68.73 16 6 Yes 71 -3.46 No 0 0 No -33 0.61 No 40 38.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89664399 + NM_000314 PTEN 0 . . . 0.94 63.36 38 5.18 No 6 -1.41 No 0 0 No -37 0.62 No 54 57.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90986750 - NM_002485 NBN 0 . . . 4.52 88.07 22 5.88 Yes 34 1.27 Yes 0 0 No -32 0.52 No 48 81.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131909942 + NM_005732 RAD50 0 . . . 3.82 73.22 36 6.1 Yes -4 0.2 No 0 0 No -36 0.68 Yes 50 67.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68772128 + NM_133509 RAD51B 0 . . . 3.44 62.71 30 3.82 No 27 1.06 Yes 0 0 No -29 0.39 No 31 70.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56779280 + NM_058216 RAD51C 0 . . . 4.8 73.61 19 5.38 No 43 0.73 No 0 0 No -27 0.53 No 43 90.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69002906 + NM_133509 RAD51B 0 . . . 5.08 80.18 20 4.57 No 38 2.01 Yes 0 0 No -25 0.6 No 20 92.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69077023 + NM_133509 RAD51B 0 . . . 11.19 88.46 18 5.74 Yes 13 0.78 Yes 0 0 No -26 0.66 Yes 45 77.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69032554 + NM_133509 RAD51B 0 . . . 6.97 81.64 9 3.87 No -1 0.61 No 0 0 No -29 0.6 No 46 71.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131972180 + NM_005732 RAD50 0 . . . 2.29 75.72 22 4 No 62 -5.23 No 0 0 No -22 0.75 Yes 50 33.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94159859 - NM_005591 MRE11 0 . . . 5.34 68.06 49 9.55 Yes 20 1.2 Yes 0 0 No -48 0.8 Yes 38 67.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68314167 + NM_133509 RAD51B 0 . . . 4.96 70.11 21 4.95 No 13 0.45 No 0 0 No -55 0.8 Yes 36 59.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6032999 - NM_000535 PMS2 0 . . . 3.97 84.41 28 6.7 Yes 37 1.98 Yes 0 0 No -27 0.61 No 23 77.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37067213 + NM_000249 MLH1 0 . . . 0.35 63.43 16 4.99 No 14 2.26 Yes 0 0 No -20 0.69 Yes 44 90.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90955552 - NM_002485 NBN 0 . . . 0.81 68.78 28 5.83 Yes 43 -4.8 No 0 0 No -27 0.79 Yes 41 43.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90970710 - NM_002485 NBN 0 . . . 6.47 75.95 21 5.2 No 23 1.29 Yes 0 0 No -20 0.83 Yes 46 79.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68800335 + NM_004360 CDH1 0 . . . 4.05 77.28 46 7.07 Yes 49 1.48 Yes 0 0 No -23 0.33 No 47 19.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68634932 + NM_133509 RAD51B 0 . . . 1.59 61.59 19 5 No 33 0.78 Yes 0 0 No -18 0.65 No 42 46.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33427499 - NM_002878 RAD51D 0 . . . 4.43 73.17 15 4.58 No 68 2.65 Yes 0 0 No -28 0.73 Yes 48 65.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68667062 + NM_133509 RAD51B 0 . . . 5.53 75.43 47 7.96 Yes 18 1.75 Yes 0 0 No -36 0.48 No 40 95.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59906330 - NM_032043 BRIP1 0 . . . 1.38 0 34 6.07 Yes 17 1.13 Yes 0 0 No -29 0.32 No 35 64.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69078566 + NM_133509 RAD51B 0 . . . 5.85 85.76 20 5.41 No 24 0.08 No 0 0 No -26 0.63 No 50 40.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59820201 - NM_032043 BRIP1 0 . . . 5.86 87.64 20 5.57 Yes 30 0.28 No 0 0 No -19 0.7 Yes 51 87.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68790278 + NM_004360 CDH1 0 . . . 6.41 84.24 27 3.62 No 40 -2.43 No 0 0 No -26 0.35 No 43 50.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190670786 + NM_000534 PMS1 0 . . . 1.51 72.73 22 5.11 No 41 0.43 No 0 0 No -20 0.62 No 48 60.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190706772 + NM_000534 PMS1 0 . . . 6.29 84.36 12 4.8 No 40 0.45 No 0 0 No -20 0.29 No 43 81.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68962669 + NM_133509 RAD51B 0 . . . 1.38 69.76 23 5.75 Yes 76 0.56 No 0 0 No -22 0.74 Yes 39 64.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1217617 + NM_000455 STK11 0 . . . 1.06 70.54 21 6.24 Yes 59 -3.7 No 0 0 No -20 0.8 Yes 49 61.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75490726 - NM_001040108 MLH3 0 . . . 2.68 63.67 14 5.66 Yes 71 0.81 Yes 0 0 No -25 0.37 No 37 51.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68851346 + NM_133509 RAD51B 0 . . . 3.18 63.93 33 5.71 Yes 64 1.56 Yes 0 0 No -32 0.72 Yes 21 58.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41215173 - NM_007294 BRCA1 0 . . . 1.8 74.02 25 4.72 No 69 0.18 No 0 0 No -25 0.59 No 44 69.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47692071 + NM_000251 MSH2 0 . . . 0.38 77.02 23 4.16 No 54 0.82 Yes 0 0 No -18 0.36 No 45 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68310273 + NM_133509 RAD51B 0 . . . 3.4 68.65 24 4.68 No 30 -0.95 No 0 0 No -46 0.33 No 50 48.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68608895 + NM_133509 RAD51B 0 . . . 2.12 74.56 9 5.2 No 47 0.72 No 0 0 No -46 0.66 No 25 33.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68569043 + NM_133509 RAD51B 0 . . . 7.66 83.78 33 4.21 No 46 1.14 Yes 0 0 No -32 0.57 No 47 90.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215653689 - NM_000465 BARD1 0 . . . 0.57 48.07 20 7.14 Yes 76 0.09 No 0 0 No -19 0.62 No 42 59.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47734783 + NM_000251 MSH2 0 . . . 5.96 79.84 36 6.32 Yes 7 1.03 Yes 0 0 No -24 0.55 No 51 94.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68397447 + NM_133509 RAD51B 0 . . . 5.23 70.82 23 4.79 No 28 0.33 No 0 0 No -22 0.9 Yes 50 54.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47667483 + NM_000251 MSH2 0 . . . 7.23 89.36 19 4.9 No 45 1.41 Yes 0 0 No -18 0.8 Yes 23 84.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68626512 + NM_133509 RAD51B 0 . . . 10.96 86.27 18 5.43 No 65 2.09 Yes 0 0 No -23 0.67 Yes 37 50 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94222602 - NM_005591 MRE11 0 . . . 1.52 65.3 31 7.2 Yes 36 -2.5 No 0 0 No -30 0.9 Yes 40 71.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190695769 + NM_000534 PMS1 0 . . . 3.47 75.85 35 6.41 Yes 30 1.07 Yes 0 0 No -27 0.62 No 28 61.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41008682 + NM_001164269 RAD51 0 . . . 2.15 86.33 14 4.66 No 33 1.73 Yes 0 0 No -13 0.38 No 50 69.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68800484 + NM_133509 RAD51B 0 . . . 1.95 69.69 30 4.93 No 59 0.4 No 0 0 No -25 0.63 No 44 83.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68386179 + NM_133509 RAD51B 0 . . . 4.84 88.74 24 6.15 Yes 24 0.19 No 0 0 No -23 0.71 Yes 42 69.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68823515 + NM_004360 CDH1 0 . . . 5.89 0 21 6.08 Yes 4 0.59 No 0 0 No -20 0.89 Yes 54 73.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131954019 + NM_005732 RAD50 0 . . . 4.9 92.32 22 6.27 Yes 40 -3.18 No 0 0 No -29 0.48 No 48 61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68780958 + NM_133509 RAD51B 0 . . . 1.49 80.04 43 6.89 Yes 61 1.06 Yes 0 0 No -27 0.78 Yes 47 37.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41005602 + NM_001164269 RAD51 0 . . . 4 67.67 21 4.15 No 74 1.11 Yes 0 0 No -31 0.69 Yes 48 72.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69116782 + NM_133509 RAD51B 0 . . . 4.16 84.05 24 7 Yes 1 1.14 Yes 0 0 No -23 0.77 Yes 51 49.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41023535 + NM_001164269 RAD51 0 . . . 5.51 69.99 53 8.03 Yes 1 0.41 No 0 0 No -52 0.68 Yes 44 84.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190735380 + NM_000534 PMS1 0 . . . 8.67 90.6 17 4.8 No 63 0.84 Yes 0 0 No -16 0.58 No 42 74.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190723162 + NM_000534 PMS1 0 . . . 5.41 77.29 22 4.79 No 10 0.74 No 0 0 No -21 0.95 Yes 48 70.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32962300 + NM_000059 BRCA2 0 . . . 2.93 84.79 64 7.66 Yes 2 1.51 Yes 0 0 No -26 0.9 Yes 25 74.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84389381 - NM_139076 FAM175A 0 . . . 7.34 89.8 33 7.11 Yes 9 1 Yes 0 0 No -32 0.92 Yes 49 82.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59798533 - NM_032043 BRIP1 0 . . . 7.72 80.58 35 5.83 Yes 46 1.36 Yes 0 0 No -34 0.86 Yes 38 84.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68868118 + NM_004360 CDH1 0 . . . 7.38 87.16 23 6.24 Yes 11 0.88 Yes 0 0 No -22 0.94 Yes 42 83.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68760946 + NM_133509 RAD51B 0 . . . 6.92 75.15 41 7.65 Yes 2 1.88 Yes 0 0 No -20 0.55 No 42 57.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89629418 + NM_000314 PTEN 0 . . . 1.19 73.29 74 4.74 No 16 -2.33 No 0 0 No -28 0.71 Yes 47 42.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94202014 - NM_005591 MRE11 0 . . . 3.24 71.21 23 5.09 No 46 0.66 No 0 0 No -22 0.89 Yes 32 98.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75505253 - NM_001040108 MLH3 0 . . . 5.77 83.86 23 4.9 No 45 1.38 Yes 0 0 No -22 0.56 No 51 66.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68669734 + NM_133509 RAD51B 0 . . . 3.79 79.51 25 6.05 Yes 52 1.72 Yes 0 0 No -24 0.49 No 49 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68837725 + NM_133509 RAD51B 0 . . . 4.58 79.13 43 6.4 Yes 67 -4.82 No 0 0 No -35 0.69 Yes 43 52.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75478647 - NM_001040108 MLH3 0 . . . 4.29 77.23 51 7.05 Yes 5 1.28 Yes 0 0 No -34 0.42 No 50 55.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68311675 + NM_133509 RAD51B 0 . . . 9.17 79.91 52 7.62 Yes 30 0.49 No 0 0 No -30 0.42 No 33 74.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105189103 + NM_021930 RINT1 0 . . . 5.73 85.92 53 8.32 Yes 0 2.15 Yes 0 0 No -45 0.91 Yes 43 65.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190687851 + NM_000534 PMS1 0 . . . 6.29 69.43 33 5.44 No 48 0.83 Yes 0 0 No -26 0.76 Yes 10 56.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68667415 + NM_133509 RAD51B 0 . . . 4.32 84 18 4.9 No 31 0.92 Yes 0 0 No -17 0.62 No 23 36.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7587835 - NM_000546 TP53 0 . . . 1.18 64.96 29 7.61 Yes 49 0.55 No 0 0 No -28 0.91 Yes 37 78.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190656850 + NM_000534 PMS1 0 . . . 1.86 66.73 22 5.29 No 67 0.38 No 0 0 No -21 0.76 Yes 37 68.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32898274 + NM_000059 BRCA2 0 . . . 4.1 79.83 38 5.12 No 53 0.63 No 0 0 No -30 0.75 Yes 47 36.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48016166 + NM_000179 MSH6 0 . . . 1.06 62.74 14 5.48 No 16 1.05 Yes 0 0 No -25 0.65 No 42 88.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68857929 + NM_133509 RAD51B 0 . . . 9.3 83.97 14 3.78 No 71 1.72 Yes 0 0 No -22 0.77 Yes 14 12.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68782263 + NM_133509 RAD51B 0 . . . 3.41 0 19 4.43 No 29 0.44 No 0 0 No -17 0.78 Yes 36 69.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59887528 - NM_032043 BRIP1 0 . . . 2.67 74.88 16 6.86 Yes 72 1.37 Yes 0 0 No -28 0.45 No 48 76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68643498 + NM_133509 RAD51B 0 . . . 0.52 58.17 20 5.16 No 15 -2.47 No 0 0 No -22 0.8 Yes 50 43.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29114042 - NM_001005735 CHEK2 0 . . . 3.85 79.65 26 5.39 No 61 1.32 Yes 0 0 No -25 0.72 Yes 19 58.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32914910 + NM_000059 BRCA2 0 . . . 1.08 73.68 26 5.2 No 75 -5.77 No 0 0 No -25 0.89 Yes 47 45.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41195037 - NM_007294 BRCA1 0 . . . 6.08 82.72 36 5.93 Yes 36 1.03 Yes 0 0 No -35 0.49 No 51 35.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68772453 + NM_004360 CDH1 0 . . . 5.62 73.18 21 4.69 No 15 -1.17 No 0 0 No -20 0.95 Yes 43 80.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105203963 + NM_021930 RINT1 0 . . . 3.3 80.12 50 7.47 Yes 70 1.11 Yes 0 0 No -24 0.31 No 40 53.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108180514 + NM_000051 ATM 0 . . . 3.27 71.88 22 6.26 Yes 0 1.21 Yes 0 0 No -21 0.63 No 42 51.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68685121 + NM_133509 RAD51B 0 . . . 3.83 71.9 45 7.38 Yes 41 -2.47 No 0 0 No -29 0.52 No 46 89.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190743978 + NM_000534 PMS1 0 . . . 1.78 69.83 25 5.39 No 22 0.15 No 0 0 No -22 0.7 Yes 36 35.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68806688 + NM_133509 RAD51B 0 . . . 6.42 74.14 36 5.95 Yes -3 0.75 No 0 0 No -25 0.56 No 50 80.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68744124 + NM_133509 RAD51B 0 . . . 4.05 85.44 12 5.39 No 51 0.94 Yes 0 0 No -52 0.75 Yes 45 98.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89670958 + NM_000314 PTEN 0 . . . 2.89 64.79 27 5.29 No 70 1.03 Yes 0 0 No -26 0.5 No 47 90.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68843930 + NM_133509 RAD51B 0 . . . 3.31 66.85 18 4.58 No 44 0.66 No 0 0 No -17 0.84 Yes 57 80.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215604986 - NM_000465 BARD1 0 . . . 5.65 77.37 38 5.73 Yes -3 0.41 No 0 0 No -25 0.65 No 39 67.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59757272 - NM_032043 BRIP1 0 . . . 5.3 76.03 12 5.39 No 15 -2.82 No 0 0 No -26 0.32 No 47 42.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90968955 - NM_002485 NBN 0 . . . 2.36 86.91 22 5.16 No 32 1.25 Yes 0 0 No -22 0.6 No 23 36.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94160127 - NM_005591 MRE11 0 . . . 5.92 73.91 19 4.8 No 43 0.57 No 0 0 No -40 0.46 No 49 84.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108223920 + NM_000051 ATM 0 . . . 5.15 90.14 24 5.76 Yes 27 0.92 Yes 0 0 No -23 0.71 Yes 45 74.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68489135 + NM_133509 RAD51B 0 . . . 7.09 82.69 26 6.69 Yes 55 0.63 No 0 0 No -25 0.7 Yes 41 62.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37061400 + NM_000249 MLH1 0 . . . 2.24 80.12 32 4.68 No 7 1.02 Yes 0 0 No -31 0.66 No 51 85.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75515897 - NM_001040108 MLH3 0 . . . 4.05 80.49 24 5.03 No 2 1.3 Yes 0 0 No -19 0.6 No 45 63.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68753257 + NM_133509 RAD51B 0 . . . 3.67 84.44 23 4.5 No 66 1.76 Yes 0 0 No -32 0.64 No 50 78.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68785874 + NM_004360 CDH1 0 . . . 3.97 84.41 26 4.83 No 24 1.66 Yes 0 0 No -25 0.71 Yes 34 94.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104162243 - NM_001100119 XRCC3 0 . . . 0.72 69.25 23 5.57 Yes 11 0.5 No 0 0 No -22 0.61 No 47 77.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59811729 - NM_032043 BRIP1 0 . . . 0.77 56.14 36 5.92 Yes -4 0.66 No 0 0 No -27 0.66 No 39 32.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108094413 + NM_000051 ATM 0 . . . 7.32 84.08 19 5.99 Yes 53 -4.25 No 0 0 No -29 0.38 No 46 66.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68906221 + NM_133509 RAD51B 0 . . . 5.09 72.2 12 5.8 Yes 72 1.16 Yes 0 0 No -33 0.36 No 32 56.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94209356 - NM_005591 MRE11 0 . . . 6.63 83.76 18 4.45 No 27 1.18 Yes 0 0 No -21 0.87 Yes 45 77.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68571076 + NM_133509 RAD51B 0 . . . 7.92 84.42 16 4.99 No 33 -1.31 No 0 0 No -22 0.61 No 48 55.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32944678 + NM_000059 BRCA2 0 . . . 0.79 69.55 24 6.34 Yes 70 2.06 Yes 0 0 No -23 0.89 Yes 30 54.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68577950 + NM_133509 RAD51B 0 . . . 6.51 91.35 17 5.27 No 45 0.59 No 0 0 No -25 0.78 Yes 43 49.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29106536 - NM_001005735 CHEK2 0 . . . 5.92 83.46 17 5.63 Yes 66 1.19 Yes 0 0 No -20 0.61 No 39 62.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68551967 + NM_133509 RAD51B 0 . . . 3.51 0 16 5.43 No 39 0.28 No 0 0 No -25 0.36 No 45 91.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68941102 + NM_133509 RAD51B 0 . . . 10.02 82.54 35 9.44 Yes 1 1.42 Yes 0 0 No -34 0.47 No 44 60.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69092906 + NM_133509 RAD51B 0 . . . 0.18 69.14 25 5.66 Yes 12 -1.34 No 0 0 No -24 0.83 Yes 46 47.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75481458 - NM_001040108 MLH3 0 . . . 3.65 77.91 9 4.06 No -1 1.21 Yes 0 0 No -26 0.51 No 39 50.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68813855 + NM_133509 RAD51B 0 . . . 6.07 81.89 22 7.94 Yes 39 0.77 Yes 0 0 No -30 0.66 Yes 36 56.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59856745 - NM_032043 BRIP1 0 . . . 3.01 82.27 28 5.16 No 62 -1.84 No 0 0 No -50 0.66 Yes 46 58.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108168343 + NM_000051 ATM 0 . . . 4.34 74.44 24 5.72 Yes 1 0.36 No 0 0 No -23 0.6 No 41 79.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68788562 + NM_133509 RAD51B 0 . . . 4.39 87.5 28 5.14 No 9 1.09 Yes 0 0 No -27 0.89 Yes 49 96.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32889766 + NM_000059 BRCA2 0 . . . 3.9 77.32 20 5.82 Yes 8 1.11 Yes 0 0 No -19 0.76 Yes 50 89.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215606206 - NM_000465 BARD1 0 . . . 5.16 68.15 27 5.48 No 10 0.24 No 0 0 No -27 0.67 Yes 41 44.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108203262 + NM_000051 ATM 0 . . . 4.2 79.07 16 4.83 No 44 0.62 No 0 0 No -23 0.7 Yes 46 61.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94163019 - NM_005591 MRE11 0 . . . 3.51 60.98 14 4.26 No 15 0.41 No 0 0 No -20 0.85 Yes 43 50.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108225007 + NM_000051 ATM 0 . . . 0.39 70.51 63 8.9 Yes 67 0.91 Yes 0 0 No -28 0.93 Yes 35 73.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89699199 + NM_000314 PTEN 0 . . . 1.08 84.22 21 7.14 Yes 33 0.99 Yes 0 0 No -20 0.83 Yes 45 39.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89661048 + NM_000314 PTEN 0 . . . 0.25 59.06 29 6.32 Yes 48 0.46 No 0 0 No -28 0.86 Yes 48 28.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108115025 + NM_000051 ATM 0 . . . 3.62 77.57 35 6.71 Yes 76 -6.35 No 0 0 No -40 0.56 No 44 81.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68977006 + NM_133509 RAD51B 0 . . . 2.22 78.96 25 3.92 No -3 0.2 No 0 0 No -24 0.78 Yes 46 65.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68614725 + NM_133509 RAD51B 0 . . . 0.38 71.42 23 6.42 Yes 14 1.51 Yes 0 0 No -22 0.74 Yes 19 61.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84381214 - NM_139076 FAM175A 0 . . . 0.24 0 27 5.74 Yes 13 0.18 No 0 0 No -26 0.86 Yes 45 71.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32967236 + NM_000059 BRCA2 0 . . . 0.27 71.43 36 5.92 Yes 17 0.88 Yes 0 0 No -30 0.7 Yes 33 75.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68581391 + NM_133509 RAD51B 0 . . . 2.14 62.48 14 3.87 No 72 0.39 No 0 0 No -42 0.52 No 36 57.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104170276 - NM_001100119 XRCC3 0 . . . 6.8 84.99 32 5.06 No -2 0.86 Yes 0 0 No -31 0.68 Yes 46 82.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37085718 + NM_000249 MLH1 0 . . . 4.02 80.12 21 4.52 No 9 1.23 Yes 0 0 No -20 0.88 Yes 49 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108138181 + NM_000051 ATM 0 . . . 1.6 0 25 5.91 Yes 27 0.82 Yes 0 0 No -24 0.5 No 36 64.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68349646 + NM_133509 RAD51B 0 . . . 2.24 80.12 15 5.99 Yes 7 1.16 Yes 0 0 No -24 0.84 Yes 51 75.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105197286 + NM_021930 RINT1 0 . . . 1.78 0 9 3.87 No 65 0.85 Yes 0 0 No -33 0.44 No 52 68.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59775818 - NM_032043 BRIP1 0 . . . 5.18 75.47 23 6.38 Yes 22 0.39 No 0 0 No -22 0.97 Yes 48 40.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21993795 - NM_000077 CDKN2A 0 . . . 0.26 62.99 12 3.75 No 75 -5.85 No 0 0 No -23 0.71 Yes 61 23.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47728494 + NM_000251 MSH2 0 . . . 2.62 70.85 15 5.39 No 13 0.88 Yes 0 0 No -28 0.23 No 40 88.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23649533 - NM_024675 PALB2 0 . . . 4.75 76.81 32 7.94 Yes 41 -2.01 No 0 0 No -27 0.48 No 50 65.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190736114 + NM_000534 PMS1 0 . . . 1.92 63.45 24 4.39 No 62 -4.43 No 0 0 No -23 0.85 Yes 42 64.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68382201 + NM_133509 RAD51B 0 . . . 0.97 69.22 21 5.19 No -2 1.32 Yes 0 0 No -20 0.66 No 31 71.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68504255 + NM_133509 RAD51B 0 . . . 9.99 88.28 29 5.56 Yes 69 0.9 Yes 0 0 No -28 0.73 Yes 33 73.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68774225 + NM_004360 CDH1 0 . . . 1.7 0 29 4.98 No 47 1.12 Yes 0 0 No -40 0.53 No 52 90.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68388712 + NM_133509 RAD51B 0 . . . 1.26 0 15 5.18 No 24 0.86 Yes 0 0 No -50 0.32 No 37 50 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41021245 + NM_001164269 RAD51 0 . . . 4.23 64.41 21 5 No 62 -4.49 No 0 0 No -20 0.47 No 57 50.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190655152 + NM_000534 PMS1 0 . . . 4.01 0 21 4.98 No 58 0.18 No 0 0 No -21 0.59 No 37 57.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105182550 + NM_021930 RINT1 0 . . . 5.04 81.96 36 5.91 Yes 32 0.38 No 0 0 No -28 0.72 Yes 39 63.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75483491 - NM_001040108 MLH3 0 . . . 3.07 69.09 15 3.95 No 67 0.34 No 0 0 No -26 0.68 Yes 45 64.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41227916 - NM_007294 BRCA1 0 . . . 3.63 85.35 23 5.21 No 34 1.08 Yes 0 0 No -27 0.79 Yes 50 38.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108172245 + NM_000051 ATM 0 . . . 1.24 72.4 22 5.33 No 10 0.76 No 0 0 No -21 0.77 Yes 48 47.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41001996 + NM_001164269 RAD51 0 . . . 6.63 85.1 14 4.47 No 2 0.98 Yes 0 0 No -20 0.76 Yes 45 67.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68336461 + NM_133509 RAD51B 0 . . . 1.24 0 28 5.83 Yes 7 0.22 No 0 0 No -27 0.46 No 51 94.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47800165 + NM_000251 MSH2 0 . . . 1.61 86.54 83 8.97 Yes 74 0.77 Yes 0 0 No -28 0.61 No 51 91.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84405155 - NM_139076 FAM175A 0 . . . 1.81 69.89 32 5.55 No 27 0.24 No 0 0 No -31 0.68 Yes 31 47.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68495725 + NM_133509 RAD51B 0 . . . 5.02 74.37 17 4.68 No 59 1.61 Yes 0 0 No -16 0.31 No 45 52.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29108218 - NM_001005735 CHEK2 0 . . . 3.32 73.22 49 9 Yes 66 0.87 Yes 0 0 No -26 0.72 Yes 38 53.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23643406 - NM_024675 PALB2 0 . . . 3.3 65.25 9 4.58 No 54 0.83 Yes 0 0 No -14 0.19 No 40 66.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69146431 + NM_133509 RAD51B 0 . . . 0.56 0 49 7.29 Yes 9 0.52 No 0 0 No -28 0.47 No 31 80.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190713064 + NM_000534 PMS1 0 . . . 4.9 76.56 50 7.86 Yes 67 -4.71 No 0 0 No -31 0.66 No 46 38.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68654633 + NM_133509 RAD51B 0 . . . 1.18 66.27 25 5.57 Yes 16 1.1 Yes 0 0 No -24 0.84 Yes 42 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47634960 + NM_000251 MSH2 0 . . . 1.38 67.3 46 4.95 No 21 0.51 No 0 0 No -45 0.5 No 37 91.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190697403 + NM_000534 PMS1 0 . . . 5.03 77.8 31 5.57 Yes 34 1.05 Yes 0 0 No -24 0.75 Yes 24 56.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108241240 + NM_000051 ATM 0 . . . 1.91 71.16 11 4.58 No 15 0.71 No 0 0 No -46 0.71 Yes 14 81.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68972105 + NM_133509 RAD51B 0 . . . 0.13 0 30 5.77 Yes 73 -5.76 No 0 0 No -29 0.65 No 43 75.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68816612 + NM_133509 RAD51B 0 . . . 2.46 71.31 23 5.21 No 51 0.37 No 0 0 No -22 0.47 No 47 91.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32895775 + NM_000059 BRCA2 0 . . . 1.36 62.51 20 5.1 No 26 0.91 Yes 0 0 No -23 0.32 No 48 47.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41263115 - NM_007294 BRCA1 0 . . . 4.64 84.41 34 6.93 Yes 11 1.34 Yes 0 0 No -29 0.65 No 47 78.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68316523 + NM_133509 RAD51B 0 . . . 8.52 81.53 19 5.52 No 66 1.51 Yes 0 0 No -31 0.48 No 44 66.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68811816 + NM_004360 CDH1 0 . . . 4.2 85.02 29 5.34 No 4 1.65 Yes 0 0 No -26 0.46 No 54 77.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108131946 + NM_000051 ATM 0 . . . 0.52 0 26 6 Yes -2 0.96 Yes 0 0 No -25 0.73 Yes 56 43.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89631969 + NM_000314 PTEN 0 . . . 0.35 0 23 5.22 No 20 0.18 No 0 0 No -22 0.58 No 15 19.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68805667 + NM_133509 RAD51B 0 . . . 3.35 69.14 20 4.84 No 33 -2.07 No 0 0 No -19 0.61 No 51 58.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68711640 + NM_133509 RAD51B 0 . . . 0.21 71.74 28 4.56 No 7 -1.44 No 0 0 No -27 0.76 Yes 52 78.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59830684 - NM_032043 BRIP1 0 . . . 2.27 68.63 15 4.61 No 52 0.94 Yes 0 0 No -26 0.71 Yes 47 55.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23640812 - NM_024675 PALB2 0 . . . 2.21 68.4 23 3.85 No 26 1.14 Yes 0 0 No -22 0.74 Yes 32 76.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48019390 + NM_000179 MSH6 0 . . . 2.55 72.73 10 4.8 No 22 1.61 Yes 0 0 No -24 0.37 No 36 71.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68885771 + NM_133509 RAD51B 0 . . . 3.89 72.43 11 5.19 No 72 -3.25 No 0 0 No -24 0.71 Yes 50 19.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68327198 + NM_133509 RAD51B 0 . . . 2.61 70.23 21 5.99 Yes 47 0.49 No 0 0 No -29 0.53 No 47 86.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68722562 + NM_133509 RAD51B 0 . . . 4.21 0 13 4.15 No 29 0.7 No 0 0 No -31 0.4 No 48 35.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59861435 - NM_032043 BRIP1 0 . . . 2.14 0 31 5.98 Yes 5 1.72 Yes 0 0 No -30 0.83 Yes 47 59.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33443335 - NM_002878 RAD51D 0 . . . 1.28 81.63 16 4.58 No 16 1.18 Yes 0 0 No -41 0.87 Yes 41 56.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108161253 + NM_000051 ATM 0 . . . 4.09 83.16 14 5.29 No -1 0.71 No 0 0 No -21 0.59 No 43 51.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89661658 + NM_000314 PTEN 0 . . . 3.89 75.64 12 4.8 No 72 0.63 No 0 0 No -21 0.51 No 48 69.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47787576 + NM_000251 MSH2 0 . . . 4.09 71.03 17 4.35 No 56 -5.3 No 0 0 No -44 0.86 Yes 49 34.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131918321 + NM_005732 RAD50 0 . . . 7.89 74.71 17 4.8 No 53 1.61 Yes 0 0 No -20 0.61 No 41 49.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47697198 + NM_000251 MSH2 0 . . . 5.34 90 26 5.5 No 13 0.75 No 0 0 No -25 0.65 No 45 88.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6039809 - NM_000535 PMS2 0 . . . 5.08 0 23 6.24 Yes 36 1.26 Yes 0 0 No -22 0.75 Yes 22 81.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105179442 + NM_021930 RINT1 0 . . . 4.65 73.37 25 5.47 No -3 0.77 No 0 0 No -24 0.74 Yes 38 69.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41264867 - NM_007294 BRCA1 0 . . . 2.44 80.22 27 5.16 No 71 -5.28 No 0 0 No -26 0.65 No 43 43.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68542588 + NM_133509 RAD51B 0 . . . 8.29 86.37 26 6.29 Yes 76 0.08 No 0 0 No -26 0.39 No 43 57.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68555291 + NM_133509 RAD51B 0 . . . 2.96 76.07 21 5.84 Yes 42 0.72 No 0 0 No -32 0.42 No 43 50.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48030654 + NM_000179 MSH6 0 . . . 5.51 72.6 23 3.54 No 22 1.02 Yes 0 0 No -22 0.87 Yes 49 40.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69056845 + NM_133509 RAD51B 0 . . . 3.31 68.17 17 6.63 Yes 45 0.76 No 0 0 No -37 0.47 No 45 59.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47767970 + NM_000251 MSH2 0 . . . 4.03 69.75 25 5.39 No -2 0.55 No 0 0 No -22 0.52 No 41 27.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56770896 + NM_058216 RAD51C 0 . . . 4.13 75.79 35 6.07 Yes 23 0.19 No 0 0 No -34 0.72 Yes 44 45.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41014032 + NM_001164269 RAD51 0 . . . 3.71 0 9 5.39 No 17 0.38 No 0 0 No -48 0.32 No 49 69.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68808842 + NM_133509 RAD51B 0 . . . 9.26 84.31 50 8 Yes 25 1.42 Yes 0 0 No -49 0.69 Yes 46 66.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131935934 + NM_005732 RAD50 0 . . . 1.28 74.63 52 8.17 Yes 51 0.98 Yes 0 0 No -42 0.28 No 42 38.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69104697 + NM_133509 RAD51B 0 . . . 1.25 76.39 32 7.48 Yes 61 1.44 Yes 0 0 No -31 0.89 Yes 23 16.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29094210 - NM_001005735 CHEK2 0 . . . 0.32 0 30 3.83 No 15 1.33 Yes 0 0 No -25 0.55 No 43 79.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215614074 - NM_000465 BARD1 0 . . . 2.67 84.02 26 5.87 Yes -4 0.13 No 0 0 No -25 0.87 Yes 47 65.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41007676 + NM_001164269 RAD51 0 . . . 0.25 67.36 24 4.63 No 58 0.51 No 0 0 No -57 0.61 No 46 40.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47781108 + NM_000251 MSH2 0 . . . 0.33 65.65 20 6.24 Yes 27 0.03 No 0 0 No -20 0.52 No 43 63.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47723345 + NM_000251 MSH2 0 . . . 3.41 75.89 20 5.56 Yes 2 0.67 No 0 0 No -24 0.57 No 52 55.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108105646 + NM_000051 ATM 0 . . . 6.05 85.26 20 5.44 No 3 1.03 Yes 0 0 No -19 0.63 No 48 70.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215675416 - NM_000465 BARD1 0 . . . 7.93 78.11 54 10.77 Yes 4 0.84 Yes 0 0 No -36 0.36 No 51 56.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215602051 - NM_000465 BARD1 0 . . . 0.31 72.77 23 4.81 No 46 -2.38 No 0 0 No -26 0.84 Yes 49 80.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75501979 - NM_001040108 MLH3 0 . . . 3.42 70.85 31 5.6 Yes 23 0.85 Yes 0 0 No -31 0.58 No 40 85.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68553090 + NM_133509 RAD51B 0 . . . 8.38 77.39 32 5.74 Yes 19 0.26 No 0 0 No -28 0.41 No 47 51.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29135157 - NM_001005735 CHEK2 0 . . . 2.09 84.99 24 4.96 No 39 1.23 Yes 0 0 No -24 0.58 No 50 69.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68583474 + NM_133509 RAD51B 0 . . . 5.92 76.9 19 5.22 No 27 0.34 No 0 0 No -32 0.5 No 52 71.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32894491 + NM_000059 BRCA2 0 . . . 4.48 87.87 13 4.6 No 52 0.47 No 0 0 No -21 0.73 Yes 52 55.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48014157 + NM_000179 MSH6 0 . . . 4.94 0 40 6.01 Yes 35 0.62 No 0 0 No -27 0.87 Yes 22 59.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68492045 + NM_133509 RAD51B 0 . . . 7.1 77.06 88 8.28 Yes 19 0.35 No 0 0 No -21 0.31 No 48 65.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56773877 + NM_058216 RAD51C 0 . . . 0.54 72.92 24 4.87 No 39 0.9 Yes 0 0 No -23 0.54 No 62 28.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69116763 + NM_133509 RAD51B 0 . . . 7.97 81.32 27 5.29 No 6 0.91 Yes 0 0 No -26 0.54 No 52 58.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59910785 - NM_032043 BRIP1 0 . . . 3.52 70.85 17 4.8 No 13 0.79 Yes 0 0 No -44 0.57 No 40 77.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47703768 + NM_000251 MSH2 0 . . . 3.81 71.33 28 6.58 Yes 43 0.34 No 0 0 No -27 0.75 Yes 36 41.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68700948 + NM_133509 RAD51B 0 . . . 1.32 67.94 9 4.8 No 74 -4.32 No 0 0 No -46 0.16 No 46 59.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152358413 - NM_005431 XRCC2 0 . . . 1.57 69.99 17 5.29 No 70 -5.38 No 0 0 No -16 0.48 No 45 65.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59930382 - NM_032043 BRIP1 0 . . . 5.37 82.68 16 5.63 Yes 66 0.87 Yes 0 0 No -26 0.82 Yes 39 73.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108130693 + NM_000051 ATM 0 . . . 3.62 85.5 19 3.7 No 54 0.56 No 0 0 No -24 0.86 Yes 36 47.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56807369 + NM_058216 RAD51C 0 . . . 3.27 81.73 24 6.24 Yes 71 -2.91 No 0 0 No -23 0.75 Yes 49 63.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108117070 + NM_000051 ATM 0 . . . 4.16 69.87 17 5.29 No 69 1.7 Yes 0 0 No -16 0.51 No 57 75.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108128367 + NM_000051 ATM 0 . . . 1.18 83.57 30 5.25 No 19 0.46 No 0 0 No -25 0.63 No 41 65.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69139911 + NM_133509 RAD51B 0 . . . 0.28 81.14 15 5.47 No -1 0.28 No 0 0 No -26 0.69 Yes 59 55.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68980912 + NM_133509 RAD51B 0 . . . 1.56 76.7 33 5.78 Yes 49 1.29 Yes 0 0 No -32 0.64 No 48 75.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108211747 + NM_000051 ATM 0 . . . 8.81 91.48 16 5.1 No 59 0.35 No 0 0 No -23 0.62 No 46 74.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56811124 + NM_058216 RAD51C 0 . . . 1.84 86.47 34 5.49 No 2 1.16 Yes 0 0 No -33 0.82 Yes 19 47.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68313184 + NM_133509 RAD51B 0 . . . 2.38 66.79 15 5.29 No 11 -0.19 No 0 0 No -21 0.73 Yes 42 37.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23623455 - NM_024675 PALB2 0 . . . 1.52 71.01 18 7 Yes 13 0.4 No 0 0 No -17 0.69 Yes 45 55.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190741548 + NM_000534 PMS1 0 . . . 3.11 82.03 33 4.62 No 2 1.43 Yes 0 0 No -32 0.63 No 16 84.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68500218 + NM_133509 RAD51B 0 . . . 8.42 88.85 9 5.39 No 2 0.43 No 0 0 No -23 0.75 Yes 49 60.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68730296 + NM_133509 RAD51B 0 . . . 0.65 0 21 4.96 No 35 1.17 Yes 0 0 No -45 0.41 No 51 65.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68361133 + NM_133509 RAD51B 0 . . . 6.11 87.59 15 5.47 No 34 1.37 Yes 0 0 No -23 0.57 No 48 92.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1215038 + NM_000455 STK11 0 . . . 3.33 74.03 24 6 Yes -1 0.69 No 0 0 No -23 0.6 No 48 37.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52434073 - NM_004656 BAP1 0 . . . 4.62 69.74 49 8.25 Yes 47 1.01 Yes 0 0 No -26 0.48 No 45 64.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69052244 + NM_133509 RAD51B 0 . . . 1.56 76.76 15 6.51 Yes 54 -1.63 No 0 0 No -26 0.49 No 46 22.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23631775 - NM_024675 PALB2 0 . . . 2.86 70.32 20 4.11 No 34 -2.49 No 0 0 No -19 0.32 No 47 56.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68446474 + NM_133509 RAD51B 0 . . . 5.19 79.68 19 4.19 No 41 0.63 No 0 0 No -34 0.72 Yes 35 58.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1208803 + NM_000455 STK11 0 . . . 8.95 85.86 18 5.19 No 9 1.34 Yes 0 0 No -29 0.52 No 49 86.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68324862 + NM_133509 RAD51B 0 . . . 0.61 75.42 15 5 No 36 0.08 No 0 0 No -36 0.57 No 35 80.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47659684 + NM_000251 MSH2 0 . . . 6.04 85.13 21 5.48 No 12 0.01 No 0 0 No -25 0.44 No 46 56.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59858477 - NM_032043 BRIP1 0 . . . 2.45 70.83 23 5.34 No 58 0.78 Yes 0 0 No -22 0.53 No 42 32.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190707027 + NM_000534 PMS1 0 . . . 8.14 80.82 13 5.39 No 2 1.5 Yes 0 0 No -22 0.27 No 25 77.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108237094 + NM_000051 ATM 0 . . . 9.33 83.75 60 8.67 Yes 63 0.62 No 0 0 No -25 0.69 Yes 44 80.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41005651 + NM_001164269 RAD51 0 . . . 3.2 78.72 21 4.9 No 34 1.05 Yes 0 0 No -20 0.81 Yes 15 55.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94196233 - NM_005591 MRE11 0 . . . 4.98 68.95 26 5.1 No 38 1.25 Yes 0 0 No -23 0.49 No 45 76.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23651903 - NM_024675 PALB2 0 . . . 9.38 81.26 29 6.52 Yes 57 0.31 No 0 0 No -28 0.83 Yes 46 79.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68711552 + NM_133509 RAD51B 0 . . . 1.54 68.14 32 5.74 Yes 53 -3.68 No 0 0 No -50 0.57 No 42 48.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68806832 + NM_133509 RAD51B 0 . . . 0.8 69.5 29 7.35 Yes 16 1.04 Yes 0 0 No -28 0.88 Yes 55 52.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94225829 - NM_005591 MRE11 0 . . . 3.66 80.34 17 4.8 No 38 0.08 No 0 0 No -21 0.66 No 49 42.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41240987 - NM_007294 BRCA1 0 . . . 1.24 67.12 23 4.69 No 44 1.11 Yes 0 0 No -22 0.69 Yes 56 71.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29136044 - NM_001005735 CHEK2 0 . . . 0.33 68.84 28 5.83 Yes 34 -2.11 No 0 0 No -27 0.72 Yes 48 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90956064 - NM_002485 NBN 0 . . . 0.29 54.97 30 5.48 No 61 0.52 No 0 0 No -29 0.72 Yes 45 74.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190705336 + NM_000534 PMS1 0 . . . 7.06 73.71 13 4.92 No 1 0.68 No 0 0 No -29 0.38 No 46 56.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56774496 + NM_058216 RAD51C 0 . . . 7.49 87.86 17 5.57 Yes 58 1.5 Yes 0 0 No -16 0.72 Yes 46 67.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131954610 + NM_005732 RAD50 0 . . . 6.37 77.21 28 6.77 Yes 75 1.84 Yes 0 0 No -27 0.87 Yes 33 94.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215595833 - NM_000465 BARD1 0 . . . 4.78 69.29 16 7.14 Yes 45 0.1 No 0 0 No -26 0.71 Yes 21 63.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108123309 + NM_000051 ATM 0 . . . 8.55 94.16 32 5.74 Yes 30 0.25 No 0 0 No -28 0.29 No 43 72.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68635544 + NM_133509 RAD51B 0 . . . 1.39 69.59 32 7.55 Yes 75 1.34 Yes 0 0 No -31 0.73 Yes 41 76.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215611396 - NM_000465 BARD1 0 . . . 4.71 69.87 55 8.58 Yes 7 0.09 No 0 0 No -54 0.41 No 53 72.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90998598 - NM_002485 NBN 0 . . . 6.04 75.71 29 4.74 No 72 0.51 No 0 0 No -21 0.63 No 44 43.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29100628 - NM_001005735 CHEK2 0 . . . 2.12 58.66 17 4.79 No 53 1.33 Yes 0 0 No -21 0.72 Yes 34 55.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68332441 + NM_133509 RAD51B 0 . . . 2.24 80.12 22 5.89 Yes 7 1.02 Yes 0 0 No -21 0.92 Yes 51 72.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21988445 - NM_000077 CDKN2A 0 . . . 4.97 83.93 19 5.38 No 39 0.75 No 0 0 No -22 0.55 No 37 73.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29121474 - NM_001005735 CHEK2 0 . . . 1.71 74.69 18 5.17 No 39 1.62 Yes 0 0 No -20 0.78 Yes 19 69.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68676442 + NM_133509 RAD51B 0 . . . 4.1 72.57 57 8.04 Yes 4 1.05 Yes 0 0 No -29 0.56 No 44 44.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6040184 - NM_000535 PMS2 0 . . . 3.53 83.92 19 5.57 Yes 2 0.88 Yes 0 0 No -18 0.48 No 49 71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68583887 + NM_133509 RAD51B 0 . . . 8.95 84.81 20 3.6 No 62 1.14 Yes 0 0 No -19 0.41 No 47 37.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89657516 + NM_000314 PTEN 0 . . . 0.94 61.73 24 5.48 No 23 1.27 Yes 0 0 No -24 0.62 No 48 53.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68628930 + NM_133509 RAD51B 0 . . . 7.71 82.14 19 5.48 No 30 0.16 No 0 0 No -23 0.49 No 44 73.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59908706 - NM_032043 BRIP1 0 . . . 2.84 0 32 5.74 Yes 46 0.69 No 0 0 No -34 0.34 No 44 62.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68987145 + NM_133509 RAD51B 0 . . . 4.49 75.12 17 5.57 Yes 40 -3.98 No 0 0 No -16 0.66 Yes 45 48.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29121705 - NM_001005735 CHEK2 0 . . . 0.64 74.45 15 4.16 No 32 1.4 Yes 0 0 No -24 0.59 No 26 58.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104175348 - NM_001100119 XRCC3 0 . . . 1.03 0 32 5.37 No 71 0.51 No 0 0 No -31 0.7 Yes 56 54.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190665002 + NM_000534 PMS1 0 . . . 4.86 75.74 37 6.24 Yes 27 1.2 Yes 0 0 No -36 0.63 No 52 48.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131895409 + NM_005732 RAD50 0 . . . 2.61 81.02 23 4.9 No 7 0.66 No 0 0 No -22 0.95 Yes 44 36.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68781785 + NM_004360 CDH1 0 . . . 1.33 83.27 35 5.55 No 3 0.64 No 0 0 No -29 0.52 No 50 81.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48015300 + NM_000179 MSH6 0 . . . 2.61 0 26 5.72 Yes 52 0.65 No 0 0 No -25 0.6 No 40 94.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68569463 + NM_133509 RAD51B 0 . . . 2.18 68.55 28 5.38 No 33 0.11 No 0 0 No -27 0.59 No 44 39.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108126705 + NM_000051 ATM 0 . . . 2.98 69.99 35 7.46 Yes 64 0.92 Yes 0 0 No -34 0.54 No 50 40.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89716268 + NM_000314 PTEN 0 . . . 4.37 83.3 17 4.27 No 34 0.77 No 0 0 No -20 0.71 Yes 42 73.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68890040 + NM_133509 RAD51B 0 . . . 2.48 68.89 22 4.82 No 58 -5.19 No 0 0 No -21 0.77 Yes 24 61.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89672535 + NM_000314 PTEN 0 . . . 4.67 68.16 22 5.74 Yes 73 1.25 Yes 0 0 No -21 0.91 Yes 22 64.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69086828 + NM_133509 RAD51B 0 . . . 2.46 72.29 17 5.57 Yes 7 1.23 Yes 0 0 No -21 0.68 Yes 47 61.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68448748 + NM_133509 RAD51B 0 . . . 5.43 88.68 12 5.43 No 9 1.13 Yes 0 0 No -24 0.7 Yes 49 95.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108198470 + NM_000051 ATM 0 . . . 6.56 77.46 66 9.13 Yes 66 -4.68 No 0 0 No -33 0.92 Yes 45 89.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40987403 + NM_001164269 RAD51 0 . . . 2.78 65.26 18 5.46 No 62 -4.87 No 0 0 No -23 0.61 No 45 36.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47672822 + NM_000251 MSH2 0 . . . 3.01 80.96 17 6.18 Yes 76 1.54 Yes 0 0 No -22 0.67 Yes 50 63.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108211981 + NM_000051 ATM 0 . . . 8.43 89.21 40 6.38 Yes 74 1.21 Yes 0 0 No -39 0.47 No 31 60.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90958185 - NM_002485 NBN 0 . . . 2.39 67.05 26 4.96 No 71 1.34 Yes 0 0 No -18 0.46 No 42 94.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69067428 + NM_133509 RAD51B 0 . . . 5.03 81.49 24 5.2 No 20 1.27 Yes 0 0 No -23 0.7 Yes 38 80.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108221715 + NM_000051 ATM 0 . . . 0.54 71.84 19 6.78 Yes 61 1.11 Yes 0 0 No -31 0.34 No 48 84.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37051608 + NM_000249 MLH1 0 . . . 5.44 80 29 6.24 Yes 68 1.58 Yes 0 0 No -28 0.87 Yes 44 73.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41211969 - NM_007294 BRCA1 0 . . . 3.01 82.81 22 3.7 No 40 -2.98 No 0 0 No -25 0.51 No 48 79.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68313657 + NM_133509 RAD51B 0 . . . 0.46 0 23 4.68 No 2 1.08 Yes 0 0 No -23 0.68 Yes 56 47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68401890 + NM_133509 RAD51B 0 . . . 1.5 72.27 17 6.86 Yes 68 -4.63 No 0 0 No -16 0.73 Yes 34 20.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32891613 + NM_000059 BRCA2 0 . . . 0.17 0 45 5.52 No 64 1.41 Yes 0 0 No -25 0.54 No 42 43.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68826932 + NM_004360 CDH1 0 . . . 3.39 68.03 23 5 No -3 0.45 No 0 0 No -20 0.73 Yes 52 77.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47672896 + NM_000251 MSH2 0 . . . 4.75 72.53 11 5.1 No 48 -3.2 No 0 0 No -54 0.41 No 41 52.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59892098 - NM_032043 BRIP1 0 . . . 0.66 69.21 53 6 Yes 20 0.73 No 0 0 No -26 0.62 No 33 72.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190699845 + NM_000534 PMS1 0 . . . 7.08 77.71 43 7.22 Yes 25 0.22 No 0 0 No -25 0.77 Yes 41 56.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68924904 + NM_133509 RAD51B 0 . . . 0.68 79.06 21 5.74 Yes 26 0.65 No 0 0 No -26 0.54 No 32 73.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68867724 + NM_004360 CDH1 0 . . . 1.38 0 36 5.9 Yes 76 -6.12 No 0 0 No -25 0.54 No 54 76.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89656205 + NM_000314 PTEN 0 . . . 3.09 59.16 30 5.72 Yes -2 0.04 No 0 0 No -37 0.33 No 42 65.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68337342 + NM_133509 RAD51B 0 . . . 5 69.96 26 7.13 Yes 25 0.04 No 0 0 No -33 0.61 No 45 52.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68606161 + NM_133509 RAD51B 0 . . . 9.33 89.54 16 5.47 No 14 0.16 No 0 0 No -19 0.42 No 43 40.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59884190 - NM_032043 BRIP1 0 . . . 0.96 77.71 80 8.79 Yes 37 -2.66 No 0 0 No -21 0.63 No 36 53.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32963533 + NM_000059 BRCA2 0 . . . 6.43 83.25 21 4.9 No 30 1.31 Yes 0 0 No -20 0.59 No 28 92.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68848970 + NM_133509 RAD51B 0 . . . 5.59 70.36 28 5.29 No 62 -1.37 No 0 0 No -27 0.69 Yes 42 82.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68403098 + NM_133509 RAD51B 0 . . . 6.09 81.43 19 4.94 No 7 1.41 Yes 0 0 No -18 0.37 No 34 43.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108174539 + NM_000051 ATM 0 . . . 3.72 81.17 45 6.62 Yes 16 0.63 No 0 0 No -32 0.53 No 53 40.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32967382 + NM_000059 BRCA2 0 . . . 3.42 59.48 21 6.42 Yes 65 1.47 Yes 0 0 No -20 0.56 No 47 57.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47759824 + NM_000251 MSH2 0 . . . 1.51 71.89 35 6 Yes 23 0.81 Yes 0 0 No -34 0.76 Yes 43 31.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90989493 - NM_002485 NBN 0 . . . 1.35 72.75 14 5.1 No 23 -2.28 No 0 0 No -24 0.84 Yes 13 43.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69048775 + NM_133509 RAD51B 0 . . . 0.75 57.92 11 4.8 No 54 -4.41 No 0 0 No -52 0.77 Yes 45 56.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45794892 - NM_001048171 MUTYH 0 . . . 1.74 82.29 24 5.83 Yes 66 0.89 Yes 0 0 No -16 0.54 No 43 55.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75498104 - NM_001040108 MLH3 0 . . . 0.65 66.51 27 5.28 No 68 1.06 Yes 0 0 No -26 0.48 No 51 69.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37059860 + NM_000249 MLH1 0 . . . 1.34 73.72 15 4.58 No 36 0.72 No 0 0 No -21 0.47 No 52 70.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47644272 + NM_000251 MSH2 0 . . . 5.58 78.98 30 5.62 Yes 4 0.11 No 0 0 No -29 0.43 No 47 80.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89648953 + NM_000314 PTEN 0 . . . 1.54 68.71 18 4.58 No 72 0.28 No 0 0 No -47 0.66 Yes 39 56.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68694960 + NM_133509 RAD51B 0 . . . 6.91 84.22 13 5 No 38 1.29 Yes 0 0 No -22 0.37 No 50 45.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45796593 - NM_001048171 MUTYH 0 . . . 3.6 85.02 33 5.38 No 4 1.2 Yes 0 0 No -25 0.82 Yes 54 67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68585793 + NM_133509 RAD51B 0 . . . 1.7 80.04 16 4.58 No 3 1.22 Yes 0 0 No -20 0.32 No 50 57.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69070258 + NM_133509 RAD51B 0 . . . 5.62 76.98 39 6.15 Yes 68 1.04 Yes 0 0 No -25 0.77 Yes 19 52.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108108931 + NM_000051 ATM 0 . . . 0.36 73.63 29 5.86 Yes 37 1.56 Yes 0 0 No -24 0.43 No 44 56.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1214322 + NM_000455 STK11 0 . . . 4.04 74.38 27 4.98 No 63 0.1 No 0 0 No -26 0.6 No 40 22.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68358432 + NM_133509 RAD51B 0 . . . 4.59 91.75 18 5.74 Yes 26 0.46 No 0 0 No -30 0.62 No 44 48.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21993938 - NM_000077 CDKN2A 0 . . . 6.12 80.62 22 4.59 No 11 0.56 No 0 0 No -25 0.51 No 47 50.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104172953 - NM_001100119 XRCC3 0 . . . 0.06 0 15 5.66 Yes NA NA NA 0 0 No -20 0.61 No 35 53.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190685075 + NM_000534 PMS1 0 . . . 5.11 86.67 28 5.54 No 67 0.05 No 0 0 No -27 0.9 Yes 11 60.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69085285 + NM_133509 RAD51B 0 . . . 7.6 70.63 25 5.1 No 60 1.32 Yes 0 0 No -49 0.76 Yes 46 62.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33448370 - NM_002878 RAD51D 0 . . . 6.86 75.37 32 5.57 Yes 13 0.91 Yes 0 0 No -32 0.55 No 45 93.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68926073 + NM_133509 RAD51B 0 . . . 1.41 75.76 49 6.7 Yes 58 2 Yes 0 0 No -48 0.48 No 49 72.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68895177 + NM_133509 RAD51B 0 . . . 3.97 77.82 17 4.58 No 62 0.23 No 0 0 No -15 0.38 No 43 63.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131921744 + NM_005732 RAD50 0 . . . 9.32 86.11 13 4.15 No 17 0.61 No 0 0 No -20 0.67 Yes 41 83.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59880586 - NM_032043 BRIP1 0 . . . 5.69 80.25 33 5.92 Yes 55 0.14 No 0 0 No -32 0.97 Yes 44 59.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108212479 + NM_000051 ATM 0 . . . 5.23 78.42 22 7.42 Yes 5 0.81 Yes 0 0 No -21 0.57 No 49 59.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47721186 + NM_000251 MSH2 0 . . . 3.32 87.53 26 5.31 No 27 0.37 No 0 0 No -25 0.96 Yes 48 76.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108112501 + NM_000051 ATM 0 . . . 4.6 0 16 6.11 Yes 69 1.25 Yes 0 0 No -30 0.65 No 23 19.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215666129 - NM_000465 BARD1 0 . . . 3.45 63.75 30 7.13 Yes 74 0.4 No 0 0 No -29 0.89 Yes 47 61.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29108152 - NM_001005735 CHEK2 0 . . . 1.02 63.79 46 5.83 Yes 36 1.2 Yes 20 0.45 Yes -20 0.84 Yes 43 54.06 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 108228472 + NM_000051 ATM 0 . . . 2.68 77.4 37 6.3 Yes 5 0.32 No 0 0 No -34 0.39 No 48 84.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108185695 + NM_000051 ATM 0 . . . 4.64 80.78 20 4.69 No -3 0 No 0 0 No -19 0.72 Yes 49 58.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108207175 + NM_000051 ATM 0 . . . 1.67 77.8 22 4.97 No 51 0.03 No 0 0 No -21 0.71 Yes 46 64.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68926174 + NM_133509 RAD51B 0 . . . 2.46 66.35 47 4.96 No 6 0.33 No 0 0 No -28 0.4 No 52 60.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59870391 - NM_032043 BRIP1 0 . . . 5.32 69.52 43 6.85 Yes 52 1.68 Yes 0 0 No -27 0.42 No 29 67.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68452707 + NM_133509 RAD51B 0 . . . 0.24 62.23 19 5.38 No 22 0.49 No 0 0 No -18 0.71 Yes 36 58.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94213145 - NM_005591 MRE11 0 . . . 3.3 76.46 29 5.08 No 44 1.19 Yes 0 0 No -25 0.39 No 47 38.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68831332 + NM_133509 RAD51B 0 . . . 1.68 0 25 5.2 No 16 0.75 No 0 0 No -24 0.93 Yes 42 79.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59910492 - NM_032043 BRIP1 0 . . . 5.49 72.3 14 4.9 No 68 -5.96 No 0 0 No -55 0.25 No 46 74.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68352921 + NM_133509 RAD51B 0 . . . 0.8 69.21 12 4.24 No 51 0.2 No 0 0 No -36 0.7 Yes 36 52.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69118145 + NM_133509 RAD51B 0 . . . 2.73 73.52 24 5.48 No 13 0.93 Yes 0 0 No -23 0.88 Yes 40 69.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69027522 + NM_133509 RAD51B 0 . . . 6.99 88.09 16 4.48 No 27 2.41 Yes 0 0 No -48 0.88 Yes 31 90.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68627184 + NM_133509 RAD51B 0 . . . 5.91 75.22 16 4.65 No 34 0.86 Yes 0 0 No -21 0.6 No 37 67.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105176821 + NM_021930 RINT1 0 . . . 0.48 0 15 5.72 Yes 38 1.17 Yes 0 0 No -26 0.69 Yes 20 68.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68957716 + NM_133509 RAD51B 0 . . . 1.15 71.01 16 6.08 Yes 25 -2.98 No 0 0 No -27 0.34 No 53 56.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68653648 + NM_133509 RAD51B 0 . . . 3.99 80.76 20 6.4 Yes 3 0.04 No 0 0 No -22 0.55 No 47 47.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47798082 + NM_000251 MSH2 0 . . . 3.05 82.48 32 6.08 Yes 34 -1.97 No 0 0 No -31 0.68 Yes 53 43.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131945689 + NM_005732 RAD50 0 . . . 3.22 78.43 32 6.16 Yes 65 1.45 Yes 0 0 No -31 0.81 Yes 44 90.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29129618 - NM_001005735 CHEK2 0 . . . 10.43 88.63 36 7.82 Yes 56 0.83 Yes 0 0 No -35 0.51 No 49 60.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68848364 + NM_133509 RAD51B 0 . . . 2 76.63 29 5.91 Yes 58 -3.88 No 0 0 No -28 0.85 Yes 43 71.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68390642 + NM_133509 RAD51B 0 . . . 6.23 85.89 16 3.92 No 38 0.46 No 0 0 No -43 0.48 No 35 31.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104182563 - NM_001100119 XRCC3 0 . . . 8.61 78.38 21 5.02 No NA NA NA 0 0 No -45 0.44 No 27 51.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1228238 + NM_000455 STK11 0 . . . 7.68 77.09 21 4.8 No 2 1.95 Yes 0 0 No -20 0.95 Yes 50 40.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90988921 - NM_002485 NBN 0 . . . 3.89 72.05 17 4.58 No -4 0.17 No 0 0 No -41 0.35 No 54 19.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105170955 + NM_021930 RINT1 0 . . . 7.06 91.63 30 5.31 No 69 0.13 No 0 0 No -29 0.81 Yes 40 61.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190728233 + NM_000534 PMS1 0 . . . 0.66 76.57 34 4.64 No 76 1.77 Yes 0 0 No -33 0.83 Yes 45 78.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108195745 + NM_000051 ATM 0 . . . 1.59 79.21 25 5.28 No 12 1.01 Yes 0 0 No -24 0.92 Yes 46 92.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68841176 + NM_133509 RAD51B 0 . . . 0.9 68.19 15 5.1 No 28 1.52 Yes 0 0 No -21 0.68 Yes 30 93.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90972142 - NM_002485 NBN 0 . . . 2.28 71.21 22 4.8 No 65 -3.71 No 0 0 No -22 0.68 Yes 48 49.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41023708 + NM_001164269 RAD51 0 . . . 2.46 78.08 21 4.23 No 23 0.34 No 0 0 No -21 0.88 Yes 35 67.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89641568 + NM_000314 PTEN 0 . . . 2.16 61.03 20 5.66 Yes -1 0.95 Yes 0 0 No -19 0.67 Yes 43 49.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47646771 + NM_000251 MSH2 0 . . . 7.13 82.86 18 4.9 No 53 1.15 Yes 0 0 No -23 0.4 No 32 55.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59838587 - NM_032043 BRIP1 0 . . . 4.15 68.32 37 6.83 Yes 46 0.03 No 0 0 No -36 0.6 No 43 78.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6047231 - NM_000535 PMS2 0 . . . 4.1 72.85 15 6.93 Yes 28 0.77 Yes 0 0 No -29 0.45 No 41 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131910038 + NM_005732 RAD50 0 . . . 5.83 72.47 31 5.65 Yes 65 0.5 No 0 0 No -30 0.84 Yes 44 45.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32896162 + NM_000059 BRCA2 0 . . . 1.33 0 17 4.53 No 8 1.14 Yes 0 0 No -16 0.66 No 42 27.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68838224 + NM_004360 CDH1 0 . . . 2.2 72.26 15 3.89 No -2 0.17 No 0 0 No -20 0.26 No 28 62.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68916857 + NM_133509 RAD51B 0 . . . 2.14 71.69 36 8.36 Yes 17 -2 No 0 0 No -35 0.6 No 25 46.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131938448 + NM_005732 RAD50 0 . . . 0.74 64.38 16 5.04 No 63 -5.64 No 0 0 No -27 0.52 No 22 25.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89635776 + NM_000314 PTEN 0 . . . 4.13 79.73 15 4.94 No 71 0.5 No 0 0 No -26 0.67 Yes 50 64.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68756770 + NM_133509 RAD51B 0 . . . 0.26 0 34 5.74 Yes 25 2.08 Yes 0 0 No -38 0.88 Yes 20 48.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68635803 + NM_133509 RAD51B 0 . . . 5.29 69.35 17 4.12 No 1 0.2 No 0 0 No -16 0.6 No 38 84.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56795295 + NM_058216 RAD51C 0 . . . 5.39 67.62 26 5.92 Yes 55 0.02 No 0 0 No -29 0.59 No 43 71.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41220267 - NM_007294 BRCA1 0 . . . 3.87 81.51 19 5.74 Yes 56 0.68 No 0 0 No -26 0.81 Yes 22 91.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47675162 + NM_000251 MSH2 0 . . . 5.33 77.96 23 5.02 No 58 1.03 Yes 0 0 No -22 0.5 No 43 64.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59804486 - NM_032043 BRIP1 0 . . . 0.96 0 29 7.95 Yes 20 0.29 No 0 0 No -28 0.77 Yes 35 72.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68903554 + NM_133509 RAD51B 0 . . . 4.74 80.77 21 4.8 No 41 0.36 No 0 0 No -20 0.59 No 46 86.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32937205 + NM_000059 BRCA2 0 . . . 5.16 90.01 12 4.69 No 43 0.48 No 0 0 No -20 0.34 No 46 80.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68399586 + NM_133509 RAD51B 0 . . . 1.82 83.99 15 5.74 Yes 40 -2.26 No 0 0 No -45 0.32 No 62 37.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84380712 - NM_139076 FAM175A 0 . . . 6.21 90.97 31 5.77 Yes 12 0.1 No 0 0 No -26 0.71 Yes 46 60.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68352362 + NM_133509 RAD51B 0 . . . 0.72 0 20 5 No 57 -3.06 No 0 0 No -18 0.61 No 41 88.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68399031 + NM_133509 RAD51B 0 . . . 7.28 83.75 24 5.48 No 66 -1.44 No 0 0 No -23 0.93 Yes 48 75.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68554908 + NM_133509 RAD51B 0 . . . 0.4 68.34 25 5.39 No 4 1.2 Yes 0 0 No -22 0.7 Yes 38 74.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41217030 - NM_007294 BRCA1 0 . . . 2 67.28 29 6.48 Yes 11 1.2 Yes 0 0 No -28 0.61 No 47 94.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89670201 + NM_000314 PTEN 0 . . . 11.6 92.45 23 5 No 62 1.38 Yes 0 0 No -22 0.76 Yes 46 67.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68821397 + NM_004360 CDH1 0 . . . 6.45 93.23 20 7.14 Yes 34 0.5 No 0 0 No -19 0.73 Yes 49 75.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68713096 + NM_133509 RAD51B 0 . . . 2.58 83.34 26 5.47 No -2 0.26 No 0 0 No -25 0.67 Yes 60 21.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68456925 + NM_133509 RAD51B 0 . . . 1.23 74.73 9 4.69 No 33 0.71 No 0 0 No -31 0.5 No 17 58.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37094105 + NM_000249 MLH1 0 . . . 3.83 83.77 20 4.69 No 62 -2.83 No 0 0 No -19 0.87 Yes 38 70.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190674654 + NM_000534 PMS1 0 . . . 2.01 68.05 20 5.83 Yes 72 0.73 No 0 0 No -19 0.45 No 46 39.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89688666 + NM_000314 PTEN 0 . . . 4.2 85.18 29 5.53 No 53 1.25 Yes 0 0 No -28 0.85 Yes 48 82.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69005159 + NM_133509 RAD51B 0 . . . 0.58 0 31 5.83 Yes 18 0.92 Yes 0 0 No -30 0.9 Yes 47 74.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47756201 + NM_000251 MSH2 0 . . . 4.93 86.6 26 5.27 No 14 1.3 Yes 30 0.8 Yes -25 0.63 No 44 63.49 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 37058893 + NM_000249 MLH1 0 . . . 5.35 78.57 16 5.83 Yes 34 0.03 No 0 0 No -27 0.27 No 52 51.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68767567 + NM_133509 RAD51B 0 . . . 1.39 70.56 18 7 Yes 51 0.3 No 0 0 No -28 0.53 No 46 76.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69056334 + NM_133509 RAD51B 0 . . . 1.84 73.1 25 5.56 Yes 44 0.38 No 0 0 No -24 0.66 No 22 67.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68322066 + NM_133509 RAD51B 0 . . . 4.71 84.22 24 5.09 No 8 0.82 Yes 0 0 No -23 0.66 No 50 86.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68975037 + NM_133509 RAD51B 0 . . . 4.24 76.13 27 5.5 No 59 -4.39 No 0 0 No -26 0.84 Yes 45 70.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37055468 + NM_000249 MLH1 0 . . . 0.01 63.06 28 6.01 Yes 34 1.65 Yes 0 0 No -23 0.87 Yes 12 36.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84400903 - NM_139076 FAM175A 0 . . . 4.88 76.54 24 5.26 No 21 1.28 Yes 0 0 No -23 0.51 No 37 46.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108145608 + NM_000051 ATM 0 . . . 1.91 0 17 4.51 No 69 -3.62 No 0 0 No -21 0.46 No 12 39.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950139 + NM_005732 RAD50 0 . . . 0.92 65.44 34 7.7 Yes 35 0.78 Yes 0 0 No -33 0.7 Yes 47 68.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21984541 - NM_000077 CDKN2A 0 . . . 1.19 70.42 22 4.88 No 63 -4.49 No 0 0 No -22 0.58 No 48 46.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41224348 - NM_007294 BRCA1 0 . . . 2.83 72.58 32 6.41 Yes 34 0.75 No 0 0 No -31 0.73 Yes 49 47.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68427073 + NM_133509 RAD51B 0 . . . 5.55 75.86 21 4 No 46 1.16 Yes 0 0 No -26 0.55 No 37 77.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190653300 + NM_000534 PMS1 0 . . . 4.78 80.39 27 4.48 No 5 1.23 Yes 0 0 No -22 0.58 No 47 55.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7580688 - NM_000546 TP53 0 . . . 3.66 0 24 5.48 No 6 0.48 No 0 0 No -21 0.4 No 52 56.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89639025 + NM_000314 PTEN 0 . . . 3.41 73.64 29 5.87 Yes 40 0.63 No 0 0 No -28 0.74 Yes 38 38.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108106131 + NM_000051 ATM 0 . . . 7.7 87.59 45 6.96 Yes 76 0.67 No 0 0 No -44 0.73 Yes 51 51.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69098731 + NM_133509 RAD51B 0 . . . 3.07 85.98 16 4.54 No 71 0.77 Yes 0 0 No -23 0.64 No 50 53.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68818264 + NM_004360 CDH1 0 . . . 6.04 81.58 31 6.95 Yes -1 0.72 No 0 0 No -30 0.69 Yes 45 48.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21984609 - NM_000077 CDKN2A 0 . . . 4.58 74.09 72 7.44 Yes 56 0.7 No 0 0 No -54 0.39 No 44 58.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152374245 - NM_005431 XRCC2 0 . . . 0.89 75.89 37 6.03 Yes 32 -1.39 No 0 0 No -23 0.7 Yes 47 45.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108110963 + NM_000051 ATM 0 . . . 0.58 68.61 21 5 No 52 0.87 Yes 0 0 No -41 0.24 No 35 81.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215612540 - NM_000465 BARD1 0 . . . 3.7 75.37 49 7.2 Yes 70 0.99 Yes 0 0 No -48 0.44 No 13 48.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59907872 - NM_032043 BRIP1 0 . . . 3.01 0 21 4.9 No 27 0.46 No 0 0 No -20 0.89 Yes 37 84.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108214642 + NM_000051 ATM 0 . . . 2.73 69.67 25 4.19 No 8 1.19 Yes 0 0 No -25 0.68 Yes 50 54.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68314590 + NM_133509 RAD51B 0 . . . 6.21 80.23 14 5.95 Yes 10 0.76 No 0 0 No -21 0.35 No 48 70.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68884394 + NM_133509 RAD51B 0 . . . 0.16 0 14 4.36 No 8 0.56 No 0 0 No -56 0.47 No 61 35.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104172636 - NM_001100119 XRCC3 0 . . . 0.41 68.17 22 7.23 Yes 48 -1.47 No 0 0 No -21 0.95 Yes 38 37.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68487820 + NM_133509 RAD51B 0 . . . 5.59 73.09 16 4.69 No 11 0.58 No 0 0 No -21 0.71 Yes 47 94.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7585993 - NM_000546 TP53 0 . . . 7.99 77.74 10 4 No 68 -5.38 No 0 0 No -37 0.56 No 43 59.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32919784 + NM_000059 BRCA2 0 . . . 2.16 0 38 6.26 Yes 46 0.11 No 0 0 No -37 0.84 Yes 46 66.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33438501 - NM_002878 RAD51D 0 . . . 5.04 80.64 14 4.37 No 16 0.95 Yes 0 0 No -46 0.52 No 47 75.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21973537 - NM_000077 CDKN2A 0 . . . 5.86 79.55 15 3.69 No 51 -5.09 No 0 0 No -31 0.63 No 41 68.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29115691 - NM_001005735 CHEK2 0 . . . 0.74 0 24 4.59 No 47 0.67 No 0 0 No -23 0.94 Yes 55 71.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68296502 + NM_133509 RAD51B 0 . . . 1.66 0 18 3.52 No 41 -2.39 No 0 0 No -17 0.27 No 52 51.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68793885 + NM_004360 CDH1 0 . . . 2.31 76.7 25 5.48 No 74 1.07 Yes 0 0 No -20 0.52 No 48 91.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1229602 + NM_000455 STK11 0 . . . 2.34 71.04 37 6.86 Yes NA NA NA 0 0 No -27 0.46 No 22 23.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68531862 + NM_133509 RAD51B 0 . . . 4.12 0 22 5.76 Yes 7 0.43 No 0 0 No -21 0.76 Yes 51 90.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131970976 + NM_005732 RAD50 0 . . . 2.48 68.13 27 7.91 Yes 74 0.74 No 0 0 No -26 0.89 Yes 51 42.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68627471 + NM_133509 RAD51B 0 . . . 7.17 84.48 19 5.39 No 42 1.53 Yes 0 0 No -18 0.65 No 47 53.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59861359 - NM_032043 BRIP1 0 . . . 0.11 67.8 23 5.45 No 16 0.93 Yes 0 0 No -18 0.65 No 42 89.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59849222 - NM_032043 BRIP1 0 . . . 2.46 76.85 28 5.67 Yes 76 1.48 Yes 0 0 No -27 0.68 Yes 25 51.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59879938 - NM_032043 BRIP1 0 . . . 3.02 73.87 19 5.83 Yes 26 0.56 No 0 0 No -18 0.76 Yes 37 80.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7581643 - NM_000546 TP53 0 . . . 2.36 67.64 44 6.03 Yes 57 -3.8 No 0 0 No -23 0.61 No 43 64.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015655 + NM_000179 MSH6 0 . . . 4.78 72.78 23 5.39 No 21 1.42 Yes 0 0 No -22 0.95 Yes 45 59.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68705653 + NM_133509 RAD51B 0 . . . 10.46 88.55 17 5.22 No 75 0.99 Yes 0 0 No -25 0.39 No 45 60.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215602582 - NM_000465 BARD1 0 . . . 1.94 51.51 37 7.28 Yes 13 1.34 Yes 0 0 No -36 0.5 No 45 62.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68558019 + NM_133509 RAD51B 0 . . . 1.28 55.22 15 4.54 No 10 0.25 No 0 0 No -42 0.37 No 48 73.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41203207 - NM_007294 BRCA1 0 . . . 1.74 71.37 34 6.06 Yes 11 0.02 No 0 0 No -33 0.72 Yes 47 55.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68710366 + NM_133509 RAD51B 0 . . . 4.54 83.84 26 6 Yes 27 -3.69 No 0 0 No -25 0.79 Yes 46 68.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68639629 + NM_133509 RAD51B 0 . . . 0.66 67.03 15 5.57 Yes 69 0.78 Yes 0 0 No -61 0.82 Yes 48 71.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68575872 + NM_133509 RAD51B 0 . . . 2.49 69.51 38 6.08 Yes 27 0.07 No 0 0 No -26 0.58 No 27 66.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68802814 + NM_133509 RAD51B 0 . . . 1.56 0 11 5.29 No 50 1.02 Yes 0 0 No -23 0.46 No 45 42.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190669347 + NM_000534 PMS1 0 . . . 4.97 75.66 27 5.58 Yes 74 1.84 Yes 0 0 No -26 0.78 Yes 37 77.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68625985 + NM_133509 RAD51B 0 . . . 2.51 68.54 27 8.74 Yes 64 1.03 Yes 0 0 No -26 0.72 Yes 31 74.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32931957 + NM_000059 BRCA2 0 . . . 2.36 74.57 24 4.9 No 27 0.02 No 0 0 No -17 0.45 No 44 39.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47740024 + NM_000251 MSH2 0 . . . 8.01 85.75 19 6.07 Yes 68 1.34 Yes 0 0 No -18 0.84 Yes 41 65.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59914193 - NM_032043 BRIP1 0 . . . 10.19 90.63 16 5.29 No 66 1.47 Yes 0 0 No -44 0.63 No 45 86.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69113949 + NM_133509 RAD51B 0 . . . 3.6 0 31 6.27 Yes 68 1.65 Yes 0 0 No -30 0.65 No 35 67.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47731038 + NM_000251 MSH2 0 . . . 0.11 67.58 41 5.14 No 62 1.25 Yes 0 0 No -40 0.65 No 32 84.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47715801 + NM_000251 MSH2 0 . . . 3.1 76.26 14 4.46 No 61 0.28 No 0 0 No -26 0.5 No 60 62.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41222414 - NM_007294 BRCA1 0 . . . 4.19 77.44 25 5 No 23 -3.37 No 0 0 No -25 0.61 No 49 64.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131975719 + NM_005732 RAD50 0 . . . 10.8 88.49 16 4.6 No 13 0.78 Yes 0 0 No -23 0.41 No 45 81.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190705050 + NM_000534 PMS1 0 . . . 1.75 63.09 30 6.76 Yes 69 -6.25 No 0 0 No -24 0.68 Yes 48 36.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108155711 + NM_000051 ATM 0 . . . 1.54 0 21 5.1 No 42 1.45 Yes 0 0 No -25 0.74 Yes 32 82.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68417337 + NM_133509 RAD51B 0 . . . 4.14 81.37 38 6.22 Yes 54 0.48 No 0 0 No -37 0.72 Yes 48 78.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68757568 + NM_133509 RAD51B 0 . . . 6.77 90.92 20 5.66 Yes 20 -1.34 No 0 0 No -19 0.83 Yes 43 54.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33440821 - NM_002878 RAD51D 0 . . . 7.05 78.13 21 4.9 No 3 0.39 No 0 0 No -20 0.92 Yes 48 68.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89649294 + NM_000314 PTEN 0 . . . 5.55 96.25 13 4.97 No 45 0.2 No 0 0 No -28 0.76 Yes 48 44.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47669838 + NM_000251 MSH2 0 . . . 5.34 77.59 30 6.65 Yes 15 -1.73 No 0 0 No -30 0.82 Yes 43 48.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69115856 + NM_133509 RAD51B 0 . . . 0.17 69.26 32 6.22 Yes 64 -5.53 No 0 0 No -31 0.61 No 43 64.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47788874 + NM_000251 MSH2 0 . . . 6.55 76.6 21 5.09 No 4 0.13 No 0 0 No -20 0.53 No 47 40.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131908683 + NM_005732 RAD50 0 . . . 6.11 82.72 13 5.01 No 32 -2.39 No 0 0 No -21 0.27 No 45 51.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68313983 + NM_133509 RAD51B 0 . . . 5.76 87.73 23 5.39 No 41 0.02 No 0 0 No -23 0.79 Yes 50 67.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32973899 + NM_000059 BRCA2 0 . . . 1.45 70.89 25 4.86 No 26 -3.43 No 0 0 No -19 0.7 Yes 58 49.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59916047 - NM_032043 BRIP1 0 . . . 1.72 67.49 18 4.9 No 39 1.24 Yes 0 0 No -22 0.85 Yes 19 72.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90967264 - NM_002485 NBN 0 . . . 0.14 76.91 25 5.44 No 25 0.86 Yes 0 0 No -27 0.59 No 33 97.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68870509 + NM_133509 RAD51B 0 . . . 6.93 82.85 20 5.07 No 33 1.14 Yes 0 0 No -30 0.93 Yes 46 70.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69041336 + NM_133509 RAD51B 0 . . . 4.84 83.63 36 7.41 Yes 57 -3.77 No 0 0 No -23 0.67 Yes 41 69.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190735120 + NM_000534 PMS1 0 . . . 1.53 62.93 21 4.79 No 20 0.9 Yes 0 0 No -44 0.64 No 38 91.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105210075 + NM_021930 RINT1 0 . . . 2.15 66.64 24 5 No 63 0.33 No 0 0 No -22 0.9 Yes 42 85.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59813738 - NM_032043 BRIP1 0 . . . 3.73 65.04 17 4.12 No 53 0.69 No 0 0 No -30 0.69 Yes 42 52.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68294691 + NM_133509 RAD51B 0 . . . 4.04 74.52 12 4.24 No 55 0.57 No 0 0 No -22 0.89 Yes 36 48.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56787028 + NM_058216 RAD51C 0 . . . 7.37 82.15 33 5.72 Yes 28 0.48 No 0 0 No -32 0.95 Yes 47 82.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68862509 + NM_133509 RAD51B 0 . . . 5.57 84.14 21 5.2 No 24 0.4 No 0 0 No -23 0.45 No 47 72.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37033456 + NM_000249 MLH1 0 . . . 0.08 68.8 35 6.35 Yes 75 1.49 Yes 0 0 No -34 0.81 Yes 45 92.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6049415 - NM_000535 PMS2 0 . . . 2.61 80.12 14 4.91 No 21 0.73 No 0 0 No -22 0.5 No 37 82.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68496424 + NM_133509 RAD51B 0 . . . 6.17 86.64 14 5.99 Yes -1 0.46 No 0 0 No -20 0.59 No 35 84.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41272411 - NM_007294 BRCA1 0 . . . 0.54 0 14 3.95 No 69 0.54 No 0 0 No -17 0.87 Yes 41 59.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68843100 + NM_004360 CDH1 0 . . . 3.79 76.54 17 6.34 Yes 44 -1.59 No 0 0 No -26 0.88 Yes 42 36.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47668798 + NM_000251 MSH2 0 . . . 7.8 82.1 44 6.26 Yes 17 2.37 Yes 0 0 No -20 0.45 No 41 91.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69107992 + NM_133509 RAD51B 0 . . . 6.45 78.51 19 5.35 No 24 -1.67 No 0 0 No -19 0.42 No 40 47.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190693946 + NM_000534 PMS1 0 . . . 1.03 76.06 22 4.69 No 70 0.78 Yes 0 0 No -22 0.47 No 52 66.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68653771 + NM_133509 RAD51B 0 . . . 6.59 86.29 34 7 Yes 1 0.25 No 0 0 No -29 0.49 No 48 34.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68691844 + NM_133509 RAD51B 0 . . . 2.45 70.82 21 5 No 57 -3.36 No 0 0 No -20 0.88 Yes 30 26.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59754586 - NM_032043 BRIP1 0 . . . 3.08 74.81 21 5.16 No 67 1.68 Yes 0 0 No -35 0.46 No 35 97.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56775808 + NM_058216 RAD51C 0 . . . 3.68 70.85 18 7 Yes 21 1.72 Yes 0 0 No -17 0.48 No 42 84.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68850440 + NM_133509 RAD51B 0 . . . 3.53 0 55 5.1 No 48 0.42 No 0 0 No -27 0.54 No 23 60.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47693220 + NM_000251 MSH2 0 . . . 6.65 72.44 28 5.29 No 23 1.57 Yes 0 0 No -21 0.36 No 46 84.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108158463 + NM_000051 ATM 0 . . . 4.05 71.91 29 6.95 Yes 66 -5.43 No 0 0 No -29 0.48 No 39 66.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68843315 + NM_004360 CDH1 0 . . . 0.3 70.38 17 4.8 No 34 1.07 Yes 0 0 No -30 0.44 No 24 69.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47732302 + NM_000251 MSH2 0 . . . 3.31 70.93 16 4.96 No 52 0.58 No 0 0 No -25 0.81 Yes 25 75.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190729577 + NM_000534 PMS1 0 . . . 3.96 0 47 6.74 Yes 46 0.56 No 0 0 No -34 0.61 No 40 37.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215646435 - NM_000465 BARD1 0 . . . 2.73 0 21 5.06 No 22 0.63 No 0 0 No -20 0.76 Yes 36 87.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68988167 + NM_133509 RAD51B 0 . . . 10.43 79.55 33 7.28 Yes 15 1.26 Yes 0 0 No -32 0.75 Yes 43 55.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94202731 - NM_005591 MRE11 0 . . . 0.74 69.14 22 5.24 No 27 0.46 No 0 0 No -21 0.92 Yes 31 87.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21975601 - NM_000077 CDKN2A 0 . . . 1.95 76.4 26 5.47 No 49 0.76 No 0 0 No -25 0.94 Yes 53 34.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21981966 - NM_000077 CDKN2A 0 . . . 3.56 74.61 18 3.87 No 46 -3.6 No 0 0 No -24 0.79 Yes 47 83.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68890583 + NM_133509 RAD51B 0 . . . 5.07 74.22 28 5.38 No 75 0.83 Yes 0 0 No -27 0.84 Yes 42 60.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68772456 + NM_133509 RAD51B 0 . . . 7.61 80.5 9 4.68 No 5 1.92 Yes 0 0 No -40 0.82 Yes 53 72.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108171087 + NM_000051 ATM 0 . . . 2.97 74.54 41 6.05 Yes 27 0.68 No 0 0 No -28 0.72 Yes 48 62.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89627720 + NM_000314 PTEN 0 . . . 1.68 65.83 12 4.97 No 58 0.89 Yes 0 0 No -45 0.63 No 48 66.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75507470 - NM_001040108 MLH3 0 . . . 3.69 73.9 19 5.39 No 71 0.66 No 0 0 No -18 0.46 No 48 79.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69146605 + NM_133509 RAD51B 0 . . . 5.01 84.41 26 5 No 41 1.34 Yes 0 0 No -46 0.26 No 44 45.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68345518 + NM_133509 RAD51B 0 . . . 1.88 71.21 15 6.6 Yes 10 1.4 Yes 0 0 No -36 0.64 No 42 76.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68903248 + NM_133509 RAD51B 0 . . . 7.32 72.82 28 5.38 No 65 1.23 Yes 0 0 No -27 0.86 Yes 39 79.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68834193 + NM_133509 RAD51B 0 . . . 1.83 76.24 29 5.39 No 22 0.78 Yes 0 0 No -28 0.73 Yes 36 60.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56801228 + NM_058216 RAD51C 0 . . . 2.38 0 25 6.7 Yes 41 0.31 No 0 0 No -24 0.93 Yes 44 57.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89640062 + NM_000314 PTEN 0 . . . 1.38 0 34 6 Yes 71 -3.59 No 0 0 No -25 0.7 Yes 41 77.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104175147 - NM_001100119 XRCC3 0 . . . 0.58 0 27 5.06 No 56 -0.5 No 0 0 No -26 0.77 Yes 50 34.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40995426 + NM_001164269 RAD51 0 . . . 0.69 71.99 22 5 No 44 0.4 No 0 0 No -25 0.67 Yes 14 79.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45804697 - NM_001048171 MUTYH 0 . . . 5.44 76 17 6.48 Yes 57 1.08 Yes 0 0 No -16 0.81 Yes 50 92.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52442135 - NM_004656 BAP1 0 . . . 3.54 77.71 17 5.83 Yes 37 1.47 Yes 26 0.68 Yes -46 0.58 No 45 56.31 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr7 6034560 - NM_000535 PMS2 0 . . . 2.08 74.4 17 5.57 Yes 26 0.75 No 0 0 No -16 0.57 No 28 53.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68541439 + NM_133509 RAD51B 0 . . . 5.89 72.88 24 5.62 Yes 52 1.59 Yes 0 0 No -23 0.8 Yes 47 77.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131979232 + NM_005732 RAD50 0 . . . 3.37 72.18 58 7.61 Yes 27 0.19 No 0 0 No -28 0.41 No 46 65.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56812383 + NM_058216 RAD51C 0 . . . 0.69 66.89 28 5.83 Yes 76 0.69 No 0 0 No -27 0.67 Yes 50 57.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68869929 + NM_133509 RAD51B 0 . . . 8.35 93.81 17 6.21 Yes 31 0.25 No 0 0 No -33 0.55 No 47 34.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68392171 + NM_133509 RAD51B 0 . . . 3.6 85.02 43 6.77 Yes 4 1.2 Yes 0 0 No -42 0.65 No 54 68.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190701911 + NM_000534 PMS1 0 . . . 13.13 92.63 21 7.32 Yes 18 0.32 No 0 0 No -20 0.88 Yes 36 52.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131929311 + NM_005732 RAD50 0 . . . 2.62 71.23 26 6.29 Yes 51 0.28 No 0 0 No -26 0.39 No 44 56.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89677147 + NM_000314 PTEN 0 . . . 5.31 70.34 29 5.51 No -2 0.58 No 0 0 No -23 0.76 Yes 38 83.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89645728 + NM_000314 PTEN 0 . . . 4.9 76.01 21 5.16 No 60 -5.92 No 0 0 No -60 0.4 No 38 69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68857766 + NM_133509 RAD51B 0 . . . 1.08 81.15 28 4.91 No 73 0.53 No 0 0 No -27 0.39 No 38 87.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48022723 + NM_000179 MSH6 0 . . . 2.64 83.65 13 4.36 No 33 1.13 Yes 0 0 No -26 0.42 No 51 56.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32959683 + NM_000059 BRCA2 0 . . . 7.1 73.05 39 7.55 Yes 57 -1.13 No 0 0 No -38 0.84 Yes 42 54.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68481276 + NM_133509 RAD51B 0 . . . 4.34 60.25 31 4.31 No 13 0.9 Yes 0 0 No -14 0.49 No 45 79.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810701 + NM_004360 CDH1 0 . . . 2.81 71.39 26 5.48 No 47 0.6 No 0 0 No -25 0.88 Yes 42 46.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59759189 - NM_032043 BRIP1 0 . . . 4.8 71.58 18 5.27 No 33 0.11 No 0 0 No -21 0.64 No 37 77.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59841430 - NM_032043 BRIP1 0 . . . 6.24 86.96 18 5.62 Yes 23 0.96 Yes 0 0 No -25 0.75 Yes 41 82.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94222673 - NM_005591 MRE11 0 . . . 4.15 76.32 21 5.1 No 74 -1.72 No 0 0 No -20 0.91 Yes 31 88.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47674840 + NM_000251 MSH2 0 . . . 1.71 73.14 29 6.01 Yes 61 1.01 Yes 0 0 No -28 0.93 Yes 50 49.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41234311 - NM_007294 BRCA1 0 . . . 4.46 79.48 16 4.47 No 74 0.95 Yes 0 0 No -30 0.81 Yes 47 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131940143 + NM_005732 RAD50 0 . . . 8.29 83.94 84 7.65 Yes 8 1.1 Yes 0 0 No -31 0.79 Yes 50 91.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1224468 + NM_000455 STK11 0 . . . 8.34 89.51 23 5.1 No 52 1.2 Yes 0 0 No -22 0.92 Yes 51 49.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47710490 + NM_000251 MSH2 0 . . . 1.83 0 19 7.07 Yes -2 0.52 No 0 0 No -18 0.56 No 50 73.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41235973 - NM_007294 BRCA1 0 . . . 0.09 78.47 27 5.74 Yes 62 -5.23 No 0 0 No -26 0.53 No 45 30.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40988415 + NM_001164269 RAD51 0 . . . 5.32 77.67 62 7.94 Yes 45 0.95 Yes 0 0 No -30 0.86 Yes 19 69.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68657260 + NM_133509 RAD51B 0 . . . 6.13 76.48 26 4.51 No 21 1.71 Yes 0 0 No -21 0.61 No 52 62.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190653175 + NM_000534 PMS1 0 . . . 5.26 75.77 39 5.76 Yes 64 0.78 Yes 0 0 No -20 0.44 No 49 71.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52434771 - NM_004656 BAP1 0 . . . 6.41 83.04 33 7.75 Yes 71 -5.2 No 0 0 No -32 0.58 No 49 87.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68393831 + NM_133509 RAD51B 0 . . . 0.61 0 29 5.61 Yes 59 0.37 No 0 0 No -28 0.7 Yes 44 76.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59840883 - NM_032043 BRIP1 0 . . . 5.33 74.94 11 4.12 No 3 1.25 Yes 0 0 No -30 0.66 No 48 41.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29099628 - NM_001005735 CHEK2 0 . . . 11.55 78.48 16 6.06 Yes 37 0.32 No 0 0 No -33 0.38 No 35 48.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59767486 - NM_032043 BRIP1 0 . . . 6.96 76.89 32 4.78 No 36 1.22 Yes 0 0 No -35 0.57 No 49 67.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47793872 + NM_000251 MSH2 0 . . . 1.31 0 15 3.37 No 0 0.46 No 0 0 No -31 0.74 Yes 38 68.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68561813 + NM_133509 RAD51B 0 . . . 0.73 0 31 6.66 Yes 12 0.16 No 0 0 No -27 0.49 No 37 43.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68743424 + NM_133509 RAD51B 0 . . . 7.29 79.05 53 7.41 Yes 76 -4.86 No 0 0 No -25 0.49 No 47 61.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68990148 + NM_133509 RAD51B 0 . . . 6.09 87.53 15 4.56 No 46 -2.19 No 0 0 No -20 0.55 No 41 89.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190714751 + NM_000534 PMS1 0 . . . 7.35 77.96 17 6.08 Yes 11 1.71 Yes 0 0 No -16 0.73 Yes 47 86.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59899603 - NM_032043 BRIP1 0 . . . 0.18 0 21 4.41 No 49 0.65 No 0 0 No -20 0.43 No 52 47.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89678752 + NM_000314 PTEN 0 . . . 5.3 72.51 44 7.54 Yes 64 1.2 Yes 0 0 No -43 0.79 Yes 40 80.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68528226 + NM_133509 RAD51B 0 . . . 7.09 77.35 21 5.74 Yes 35 0.71 No 0 0 No -20 0.82 Yes 47 56.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131956911 + NM_005732 RAD50 0 . . . 4.81 0 25 5.39 No 2 1.06 Yes 0 0 No -22 0.67 Yes 56 41.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84389405 - NM_139076 FAM175A 0 . . . 3.29 73.01 28 6.77 Yes 29 0.76 No 0 0 No -27 0.89 Yes 55 54.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215652766 - NM_000465 BARD1 0 . . . 0.62 61.34 43 6.7 Yes 25 0.86 Yes 0 0 No -25 0.78 Yes 21 56.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68916066 + NM_133509 RAD51B 0 . . . 8.42 84.27 18 5.68 Yes 12 1.97 Yes 0 0 No -20 0.42 No 46 77.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47652819 + NM_000251 MSH2 0 . . . 1.55 0 35 6.19 Yes 21 1.07 Yes 0 0 No -34 0.65 No 44 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68294651 + NM_133509 RAD51B 0 . . . 4.72 64.76 29 5.28 No 15 0.6 No 0 0 No -28 0.69 Yes 43 83.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59768827 - NM_032043 BRIP1 0 . . . 1.1 61.89 25 6.48 Yes 76 -3.88 No 0 0 No -24 0.69 Yes 62 27.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29132219 - NM_001005735 CHEK2 0 . . . 0.26 0 27 5.57 Yes 23 1.16 Yes 0 0 No -26 0.93 Yes 35 84.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131896769 + NM_005732 RAD50 0 . . . 0.25 0 30 5.36 No 21 1.33 Yes 0 0 No -23 0.93 Yes 37 82.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190727810 + NM_000534 PMS1 0 . . . 1.97 67.62 18 4.12 No 46 1.31 Yes 0 0 No -27 0.6 No 42 45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6011926 - NM_000535 PMS2 0 . . . 8.22 82.53 24 4.83 No 28 0.37 No 0 0 No -23 0.93 Yes 30 92.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131977341 + NM_005732 RAD50 0 . . . 0.81 70.91 18 4.49 No 73 -4.54 No 0 0 No -31 0.5 No 20 37.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108222851 + NM_000051 ATM 0 . . . 1.24 65.34 15 5.09 No 62 -5.49 No 0 0 No -26 0.31 No 39 28.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108101998 + NM_000051 ATM 0 . . . 1.72 65.12 16 3.83 No 64 0.66 No 0 0 No -22 0.86 Yes 18 31.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69133710 + NM_133509 RAD51B 0 . . . 4.93 78.6 25 5.76 Yes 61 0.95 Yes 0 0 No -24 0.71 Yes 47 80.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108144797 + NM_000051 ATM 0 . . . 7.31 85.79 22 5.29 No 26 0.65 No 0 0 No -21 0.52 No 46 52.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69101304 + NM_133509 RAD51B 0 . . . 6.87 76.1 13 4.19 No 9 0.95 Yes 0 0 No -22 0.35 No 49 93.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68646352 + NM_133509 RAD51B 0 . . . 1.46 63.43 30 5.47 No 18 0.39 No 0 0 No -29 0.37 No 40 97.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59811297 - NM_032043 BRIP1 0 . . . 1.27 62.66 16 5.92 Yes 17 0.5 No 0 0 No -28 0.59 No 41 86.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68818160 + NM_004360 CDH1 0 . . . 1.89 69.19 28 5.38 No 13 1.36 Yes 0 0 No -27 0.52 No 45 86.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68844518 + NM_004360 CDH1 0 . . . 0.32 74.68 17 5.26 No 38 0.8 Yes 0 0 No -40 0.33 No 13 60.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1228614 + NM_000455 STK11 0 . . . 0.79 68.17 44 5.08 No 19 -2.24 No 0 0 No -34 0.33 No 54 12.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94204131 - NM_005591 MRE11 0 . . . 5.09 68.23 27 4.54 No 46 -0.7 No 0 0 No -26 0.58 No 25 61.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131981244 + NM_005732 RAD50 0 . . . 3.03 69.18 36 5.66 Yes 35 1.4 Yes 0 0 No -25 0.48 No 50 90.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152364300 - NM_005431 XRCC2 0 . . . 0.11 74.73 18 5.83 Yes 32 0.71 No 0 0 No -17 0.6 No 44 27.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131968705 + NM_005732 RAD50 0 . . . 5.36 73.47 26 4.35 No 57 1.19 Yes 0 0 No -25 0.75 Yes 34 71.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37087245 + NM_000249 MLH1 0 . . . 3.89 84.17 24 4.76 No 63 1.26 Yes 0 0 No -23 0.54 No 11 87.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47777566 + NM_000251 MSH2 0 . . . 4.71 84.17 65 8.66 Yes 43 1.01 Yes 0 0 No -26 0.48 No 15 98.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89691350 + NM_000314 PTEN 0 . . . 1.11 58.96 13 5.1 No 14 0.63 No 0 0 No -25 0.7 Yes 32 61.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59760249 - NM_032043 BRIP1 0 . . . 5.4 71.34 19 4.9 No 13 1.07 Yes 0 0 No -23 0.41 No 45 81.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68493690 + NM_133509 RAD51B 0 . . . 5.41 88.12 16 4.46 No 33 -2.63 No 0 0 No -48 0.59 No 49 91.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37089901 + NM_000249 MLH1 0 . . . 0.5 71.33 27 5.71 Yes 2 0.22 No 0 0 No -26 0.52 No 48 56.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32934917 + NM_000059 BRCA2 0 . . . 0.56 75.63 18 4.9 No 68 -5.29 No 0 0 No -17 0.65 No 44 56.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131976892 + NM_005732 RAD50 0 . . . 2.45 79.2 63 7.97 Yes 4 -1.35 No 0 0 No -21 0.67 Yes 45 39.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68875801 + NM_133509 RAD51B 0 . . . 1.28 62.48 27 5.01 No 38 0.48 No 0 0 No -21 0.66 No 48 45.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131901455 + NM_005732 RAD50 0 . . . 7.76 84.8 13 5.37 No 42 1.59 Yes 0 0 No -23 0.78 Yes 42 75.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69126014 + NM_133509 RAD51B 0 . . . 6.13 72.3 71 6.1 Yes 15 0.38 No 0 0 No -27 0.7 Yes 39 89.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75515284 - NM_001040108 MLH3 0 . . . 3.54 75.51 21 5.04 No 20 -1.86 No 0 0 No -20 0.44 No 43 49.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41012463 + NM_001164269 RAD51 0 . . . 5.16 87.44 20 5.82 Yes 38 1.25 Yes 0 0 No -29 0.5 No 45 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41266126 - NM_007294 BRCA1 0 . . . 1.43 0 38 8.15 Yes 50 -4.29 No 0 0 No -37 0.47 No 38 53.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69088936 + NM_133509 RAD51B 0 . . . 0.67 63.83 41 7.96 Yes 0 0.21 No 0 0 No -33 0.62 No 58 50.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131920148 + NM_005732 RAD50 0 . . . 9.69 81.67 21 5 No 71 0.35 No 0 0 No -20 0.87 Yes 42 82.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89658625 + NM_000314 PTEN 0 . . . 7.06 79.52 29 4.95 No 28 0.95 Yes 0 0 No -29 0.39 No 33 67.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68813305 + NM_133509 RAD51B 0 . . . 1.16 71.53 41 6.48 Yes 43 0.82 Yes 0 0 No -40 0.41 No 48 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105178484 + NM_021930 RINT1 0 . . . 2.36 79.65 49 6.76 Yes 2 1.95 Yes 0 0 No -31 0.49 No 25 53.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69093124 + NM_133509 RAD51B 0 . . . 0.94 60.13 21 5.32 No -4 0.44 No 0 0 No -28 0.56 No 47 60.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68667638 + NM_133509 RAD51B 0 . . . 4.33 73.34 32 6.1 Yes 72 -4.72 No 0 0 No -25 0.93 Yes 41 62.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89662153 + NM_000314 PTEN 0 . . . 0.59 61 17 5.29 No 25 0.1 No 0 0 No -24 0.64 No 39 56.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131898667 + NM_005732 RAD50 0 . . . 4.03 61.57 35 6.14 Yes 76 -6.03 No 0 0 No -34 0.75 Yes 44 60.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68417404 + NM_133509 RAD51B 0 . . . 4.53 78.93 33 7.35 Yes 67 0.17 No 0 0 No -32 0.88 Yes 51 44.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47662315 + NM_000251 MSH2 0 . . . 1.96 83 29 5.38 No 58 1.17 Yes 0 0 No -28 0.7 Yes 23 16.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190702014 + NM_000534 PMS1 0 . . . 1.5 68.84 15 4.58 No 49 0.69 No 0 0 No -34 0.36 No 48 82.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68838803 + NM_133509 RAD51B 0 . . . 1.88 78.12 16 4.07 No 76 -5.54 No 0 0 No -20 0.48 No 46 69.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68888974 + NM_133509 RAD51B 0 . . . 2.93 68.03 22 7.27 Yes 44 0.62 No 0 0 No -21 0.73 Yes 14 44.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69010021 + NM_133509 RAD51B 0 . . . 2.24 71.1 19 6.07 Yes 12 0.95 Yes 0 0 No -18 0.8 Yes 34 75.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47675843 + NM_000251 MSH2 0 . . . 7.77 83.81 16 4.36 No 10 0.94 Yes 0 0 No -36 0.92 Yes 48 75.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90992035 - NM_002485 NBN 0 . . . 5.81 76.7 18 4.83 No 25 0.02 No 0 0 No -17 0.46 No 43 76.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105182467 + NM_021930 RINT1 0 . . . 0.66 65.99 15 4.45 No 71 0.55 No 0 0 No -31 0.63 No 45 40.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6026296 - NM_000535 PMS2 0 . . . 5.47 84.95 24 4.8 No 44 1.05 Yes 0 0 No -23 0.59 No 14 63.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47806472 + NM_000251 MSH2 0 . . . 0.82 0 41 4.93 No -3 0.31 No 0 0 No -25 0.52 No 47 70.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68428622 + NM_133509 RAD51B 0 . . . 1.05 65.5 21 5.88 Yes 59 -5.79 No 0 0 No -20 0.74 Yes 42 48.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68649780 + NM_133509 RAD51B 0 . . . 8.22 79.91 24 5.26 No 15 1.58 Yes 0 0 No -30 0.53 No 43 87.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89728217 + NM_000314 PTEN 0 . . . 2.46 71.13 13 5.74 Yes 62 -5.75 No 0 0 No -26 0.63 No 49 71.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69063706 + NM_133509 RAD51B 0 . . . 5.49 86.85 17 4.17 No 60 1.29 Yes 0 0 No -32 0.86 Yes 41 62.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68776301 + NM_004360 CDH1 0 . . . 1.92 84.22 24 4.8 No 33 1.13 Yes 0 0 No -23 0.37 No 51 44.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69141301 + NM_133509 RAD51B 0 . . . 0.45 71.48 19 5.43 No 42 0.33 No 0 0 No -22 0.53 No 21 56.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94174576 - NM_005591 MRE11 0 . . . 5.5 87.14 19 5.87 Yes 76 0.36 No 0 0 No -37 0.82 Yes 50 66.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59819074 - NM_032043 BRIP1 0 . . . 0.69 66.84 16 5.89 Yes -1 0.71 No 0 0 No -22 0.48 No 43 93.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68426147 + NM_133509 RAD51B 0 . . . 4.73 85.02 36 6.44 Yes 6 1.73 Yes 0 0 No -31 0.69 Yes 52 87.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105194688 + NM_021930 RINT1 0 . . . 1.71 73.32 21 5.88 Yes 58 -1.49 No 0 0 No -28 0.74 Yes 60 41.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68762248 + NM_133509 RAD51B 0 . . . 3.31 0 31 5.57 Yes 52 1.83 Yes 0 0 No -24 0.36 No 38 45.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131896011 + NM_005732 RAD50 0 . . . 2.55 81.89 24 5.2 No 59 0.86 Yes 0 0 No -53 0.38 No 50 63.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68645336 + NM_133509 RAD51B 0 . . . 6.98 76.76 53 7.55 Yes 49 0.61 No 0 0 No -25 0.5 No 48 76.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68332587 + NM_133509 RAD51B 0 . . . 1.9 68.93 11 4.12 No 19 0.88 Yes 0 0 No -37 0.59 No 39 85.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108153066 + NM_000051 ATM 0 . . . 2.74 70.16 29 5.45 No 26 1.02 Yes 0 0 No -28 0.67 Yes 41 68.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68365267 + NM_133509 RAD51B 0 . . . 1.36 74.51 15 5.39 No 14 0.47 No 0 0 No -45 0.21 No 48 56.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59778890 - NM_032043 BRIP1 0 . . . 2.13 70.03 20 5.83 Yes 15 1.28 Yes 0 0 No -39 0.87 Yes 43 65.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68607405 + NM_133509 RAD51B 0 . . . 6.88 89.98 15 3.46 No 74 0.85 Yes 0 0 No -20 0.72 Yes 52 55.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68826008 + NM_004360 CDH1 0 . . . 5.27 79.81 29 4.46 No 74 0.09 No 0 0 No -28 0.29 No 46 70.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68868067 + NM_004360 CDH1 0 . . . 4.98 85.17 20 5.57 Yes 30 1.12 Yes 0 0 No -28 0.46 No 44 51.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68319260 + NM_133509 RAD51B 0 . . . 3.72 87.15 14 4.47 No -1 0.61 No 0 0 No -23 0.67 Yes 44 49.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23613241 - NM_024675 PALB2 0 . . . 3.05 83.54 23 5.2 No 61 -2 No 0 0 No -22 0.92 Yes 54 19.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40993691 + NM_001164269 RAD51 0 . . . 1.83 82.74 31 6.82 Yes 33 0.98 Yes 0 0 No -31 0.74 Yes 50 63.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152352222 - NM_005431 XRCC2 0 . . . 5 77.6 21 5.2 No 71 1.26 Yes 0 0 No -24 0.86 Yes 50 78.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68587862 + NM_133509 RAD51B 0 . . . 2.26 0 22 5.18 No 50 0.36 No 0 0 No -21 0.75 Yes 43 75.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68504537 + NM_133509 RAD51B 0 . . . 8.36 83.59 26 5.39 No 15 0.4 No 0 0 No -25 0.96 Yes 43 48.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68969139 + NM_133509 RAD51B 0 . . . 2.58 72.61 35 6.39 Yes 66 -2.77 No 0 0 No -34 0.85 Yes 29 55.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68931206 + NM_133509 RAD51B 0 . . . 8.14 79.61 14 5.2 No 51 0.4 No 0 0 No -24 0.16 No 52 84.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47766830 + NM_000251 MSH2 0 . . . 2.52 86.15 23 6.26 Yes 73 -6.11 No 0 0 No -22 0.43 No 22 51.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108115281 + NM_000051 ATM 0 . . . 5.07 64.06 18 4.44 No 51 0.25 No 0 0 No -42 0.72 Yes 35 50.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69090623 + NM_133509 RAD51B 0 . . . 6.81 76.18 17 5.45 No 0 0.71 No 0 0 No -32 0.42 No 41 36.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47664849 + NM_000251 MSH2 0 . . . 0.15 83.78 15 5 No 15 0.2 No 0 0 No -18 0.5 No 43 95.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40994897 + NM_001164269 RAD51 0 . . . 6.25 92.4 26 6.08 Yes 4 1.2 Yes 0 0 No -25 0.81 Yes 45 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41213901 - NM_007294 BRCA1 0 . . . 0.8 0 20 4.8 No -3 0.43 No 0 0 No -19 0.54 No 55 23.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47731575 + NM_000251 MSH2 0 . . . 3.25 72.65 16 4.69 No 5 1.01 Yes 0 0 No -53 0.48 No 40 59.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68812477 + NM_133509 RAD51B 0 . . . 1.2 70.78 34 7.62 Yes 16 0.96 Yes 0 0 No -33 0.69 Yes 42 84.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68666589 + NM_133509 RAD51B 0 . . . 5.7 83.66 29 4.71 No 25 0.76 No 0 0 No -26 0.79 Yes 48 47.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68432199 + NM_133509 RAD51B 0 . . . 2.36 0 21 5.2 No 48 1.77 Yes 0 0 No -20 0.41 No 26 79.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68803422 + NM_004360 CDH1 0 . . . 1.12 81.83 45 6.87 Yes 2 0.02 No 0 0 No -35 0.8 Yes 40 32.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68483387 + NM_133509 RAD51B 0 . . . 3.76 83.93 15 5.48 No 6 0.82 Yes 0 0 No -26 0.65 No 52 80.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68407452 + NM_133509 RAD51B 0 . . . 5.59 80.36 24 5.95 Yes 32 0.95 Yes 0 0 No -23 0.96 Yes 43 90.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68976057 + NM_133509 RAD51B 0 . . . 4.18 72.5 11 4.12 No 29 0.63 No 0 0 No -19 0.6 No 48 83.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56809726 + NM_058216 RAD51C 0 . . . 0.37 81.59 21 5.2 No 17 0.79 Yes 0 0 No -20 0.52 No 41 79.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108101029 + NM_000051 ATM 0 . . . 2.88 80.38 11 5.38 No 65 1.1 Yes 0 0 No -22 0.64 No 37 90.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47782566 + NM_000251 MSH2 0 . . . 4.04 74.3 28 5.14 No 34 1.3 Yes 0 0 No -27 0.68 Yes 45 75.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108092575 + NM_000051 ATM 0 . . . 3.62 72.8 16 3.87 No 17 0.72 No 0 0 No -29 0.43 No 41 63.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90960232 - NM_002485 NBN 0 . . . 2.31 67.41 18 4.86 No 56 0.31 No 0 0 No -17 0.48 No 45 66.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69047701 + NM_133509 RAD51B 0 . . . 3.55 74.29 12 5.55 No 26 0.77 No 0 0 No -24 0.59 No 32 51.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68396144 + NM_133509 RAD51B 0 . . . 5.25 71.65 12 4.24 No -4 0.8 Yes 0 0 No -33 0.41 No 43 72.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131975214 + NM_005732 RAD50 0 . . . 5.68 72.88 15 5.35 No 21 0.59 No 0 0 No -21 0.45 No 36 52.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94184310 - NM_005591 MRE11 0 . . . 2.27 76.72 18 5.1 No 73 0.68 No 0 0 No -48 0.67 Yes 51 51.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108185607 + NM_000051 ATM 0 . . . 0.34 57.97 29 4.37 No 70 -3.99 No 0 0 No -29 0.52 No 37 88.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69063921 + NM_133509 RAD51B 0 . . . 6.42 84.55 19 4.24 No 54 0.03 No 0 0 No -18 0.36 No 44 75.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68850192 + NM_133509 RAD51B 0 . . . 3.82 69.38 40 7.14 Yes 73 0.04 No 0 0 No -39 0.92 Yes 45 52.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47671610 + NM_000251 MSH2 0 . . . 0.15 68.97 28 5.74 Yes 9 0.4 No 0 0 No -27 0.85 Yes 49 55.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68590689 + NM_133509 RAD51B 0 . . . 9.9 94.56 21 5.43 No 5 1.13 Yes 0 0 No -21 0.9 Yes 45 73.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68762214 + NM_133509 RAD51B 0 . . . 2.87 0 20 5.26 No 18 1.85 Yes 0 0 No -19 0.64 No 32 69.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47685133 + NM_000251 MSH2 0 . . . 4.55 72.94 10 4 No 18 0.59 No 0 0 No -31 0.39 No 40 89.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190728024 + NM_000534 PMS1 0 . . . 3.89 84.17 26 5.66 Yes 14 -0.18 No 0 0 No -25 0.69 Yes 44 45.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23638339 - NM_024675 PALB2 0 . . . 0.13 0 24 5.29 No 66 0.33 No 0 0 No -23 0.63 No 29 59.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68988049 + NM_133509 RAD51B 0 . . . 1.33 0 22 5 No 18 2.2 Yes 0 0 No -21 0.76 Yes 40 91.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68989565 + NM_133509 RAD51B 0 . . . 1.81 65.49 60 8.86 Yes 39 -2.26 No 0 0 No -37 0.61 No 47 66.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68764650 + NM_133509 RAD51B 0 . . . 0.23 56.84 17 6.77 Yes 31 0.51 No 0 0 No -30 0.37 No 40 51.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648778 - NM_024675 PALB2 0 . . . 2.54 65.45 42 8.19 Yes 13 0.63 No 0 0 No -41 0.97 Yes 40 84.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40989796 + NM_001164269 RAD51 0 . . . 3.97 84.41 43 6.15 Yes 19 0.73 No 0 0 No -22 0.45 No 41 80.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68317819 + NM_133509 RAD51B 0 . . . 8.82 87.33 17 4.65 No 42 1.28 Yes 0 0 No -22 0.33 No 26 69.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131913474 + NM_005732 RAD50 0 . . . 1.79 76.84 21 4.09 No 71 0.89 Yes 0 0 No -20 0.87 Yes 14 80.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108172787 + NM_000051 ATM 0 . . . 6.68 84.47 32 5.8 Yes 35 0.26 No 0 0 No -31 0.79 Yes 47 80.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69007168 + NM_133509 RAD51B 0 . . . 4.91 69.18 18 4.58 No 6 0.87 Yes 0 0 No -17 0.87 Yes 38 75.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41223320 - NM_007294 BRCA1 0 . . . 8.46 85.31 25 4.26 No 17 1.65 Yes 0 0 No -22 0.7 Yes 41 75.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32968742 + NM_000059 BRCA2 0 . . . 0.98 55.56 17 5.29 No 25 0.39 No 0 0 No -21 0.41 No 23 76.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59873702 - NM_032043 BRIP1 0 . . . 2.55 72.09 28 5.29 No 69 -5.85 No 0 0 No -27 0.85 Yes 42 55.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68811168 + NM_004360 CDH1 0 . . . 7.78 83.67 54 8.12 Yes 73 -3.07 No 0 0 No -45 0.44 No 44 71.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215648799 - NM_000465 BARD1 0 . . . 4.97 66.17 30 7.88 Yes 51 -1.28 No 0 0 No -29 0.83 Yes 22 52.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68305494 + NM_133509 RAD51B 0 . . . 3.11 76.54 10 4.89 No 6 0.86 Yes 0 0 No -23 0.44 No 48 56.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6034380 - NM_000535 PMS2 0 . . . 4.18 90.03 27 6.37 Yes 51 1.05 Yes 0 0 No -24 0.78 Yes 16 59.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108181267 + NM_000051 ATM 0 . . . 5.37 68.38 19 5.63 Yes 46 0.69 No 0 0 No -25 0.46 No 41 68.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108162770 + NM_000051 ATM 0 . . . 3.63 70.91 15 5.13 No 34 1.2 Yes 0 0 No -50 0.44 No 17 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40997681 + NM_001164269 RAD51 0 . . . 1.1 75.76 30 5.28 No 0 0.63 No 0 0 No -26 0.6 No 42 46.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152343071 - NM_005431 XRCC2 0 . . . 1.3 70.1 21 4.69 No 24 0.9 Yes 0 0 No -20 0.93 Yes 34 47.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6012201 - NM_000535 PMS2 0 . . . 2.22 70.82 19 7.07 Yes 11 0.07 No 0 0 No -27 0.56 No 42 60.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41196630 - NM_007294 BRCA1 0 . . . 0.53 64.22 17 3.65 No 62 1.34 Yes 0 0 No -16 0.4 No 44 62.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131957218 + NM_005732 RAD50 0 . . . 2.44 0 11 4.12 No 31 0.72 No 0 0 No -52 0.65 No 27 77.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105186074 + NM_021930 RINT1 0 . . . 3.73 71.98 26 6.14 Yes 16 0.99 Yes 0 0 No -25 0.78 Yes 42 83.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59821379 - NM_032043 BRIP1 0 . . . 0.3 62.51 20 5.09 No 73 0.63 No 0 0 No -26 0.82 Yes 50 39.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84397621 - NM_139076 FAM175A 0 . . . 5.63 68.58 25 4.89 No 18 0.16 No 0 0 No -22 0.84 Yes 48 66.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68454217 + NM_133509 RAD51B 0 . . . 3.83 79.53 28 6.08 Yes 0 1.2 Yes 0 0 No -27 0.36 No 50 50.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68582946 + NM_133509 RAD51B 0 . . . 5.36 75.08 25 5.39 No 42 -3.97 No 0 0 No -24 0.92 Yes 47 63.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1207873 + NM_000455 STK11 0 . . . 7.06 86.54 18 5.74 Yes -2 0.71 No 0 0 No -26 0.72 Yes 47 94.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68592182 + NM_133509 RAD51B 0 . . . 5.7 78.26 30 6.74 Yes -4 0.15 No 0 0 No -29 0.67 Yes 43 73.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68389932 + NM_133509 RAD51B 0 . . . 10.78 92.45 27 5.04 No 46 1.38 Yes 0 0 No -26 0.78 Yes 48 47.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41271881 - NM_007294 BRCA1 0 . . . 4.76 87.24 26 4.73 No 37 0.63 No 0 0 No -17 0.64 No 45 82.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131907056 + NM_005732 RAD50 0 . . . 4.46 79.55 26 5.1 No 76 -3.82 No 0 0 No -25 0.91 Yes 51 53.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190713407 + NM_000534 PMS1 0 . . . 5.31 81.12 16 5.83 Yes -3 0.43 No 0 0 No -27 0.16 No 50 71.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41005241 + NM_001164269 RAD51 0 . . . 1.19 70.73 24 6.92 Yes 54 0.24 No 0 0 No -23 0.73 Yes 62 27.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29087304 - NM_001005735 CHEK2 0 . . . 4.57 85.02 21 3.78 No 4 0.66 No 0 0 No -37 0.85 Yes 49 72.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47763292 + NM_000251 MSH2 0 . . . 1.79 0 20 4.27 No -3 0.2 No 0 0 No -19 0.62 No 40 15.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851475 - NM_032043 BRIP1 0 . . . 3.06 76.09 79 7.82 Yes 74 -1.87 No 0 0 No -23 0.46 No 43 48.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47712976 + NM_000251 MSH2 0 . . . 7.16 80.5 25 5.57 Yes 57 -2.22 No 0 0 No -24 0.9 Yes 34 72.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47706929 + NM_000251 MSH2 0 . . . 7.85 81.61 16 4.01 No 30 0.93 Yes 0 0 No -15 0.45 No 28 49.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68743816 + NM_133509 RAD51B 0 . . . 0.46 0 29 5.74 Yes 27 1.41 Yes 0 0 No -28 0.62 No 47 51.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105178762 + NM_021930 RINT1 0 . . . 5.72 84.54 36 5.86 Yes 74 0.91 Yes 0 0 No -25 0.59 No 46 51.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75514197 - NM_001040108 MLH3 0 . . . 7.9 76.51 28 5.8 Yes 16 1.35 Yes 0 0 No -27 0.59 No 42 74.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89686805 + NM_000314 PTEN 0 . . . 2.34 66.58 24 3.54 No 29 -0.67 No 0 0 No -23 0.84 Yes 37 90.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68631694 + NM_133509 RAD51B 0 . . . 0.88 0 18 7.3 Yes 28 0.1 No 0 0 No -25 0.88 Yes 40 50.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108194908 + NM_000051 ATM 0 . . . 2.33 64.37 33 6.58 Yes 22 0.77 Yes 0 0 No -32 0.79 Yes 36 70.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89674665 + NM_000314 PTEN 0 . . . 2.04 83.29 17 5.57 Yes 33 1.95 Yes 0 0 No -16 0.77 Yes 48 70.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68759621 + NM_133509 RAD51B 0 . . . 4.44 0 57 6.31 Yes 57 -3.89 No 0 0 No -26 0.79 Yes 37 51.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41228412 - NM_007294 BRCA1 0 . . . 7.02 85.23 21 4.57 No 45 1.56 Yes 0 0 No -20 0.63 No 38 63.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68845821 + NM_133509 RAD51B 0 . . . 2.12 82.81 36 4.44 No 11 0.13 No 0 0 No -20 0.89 Yes 47 78.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89722389 + NM_000314 PTEN 0 . . . 2.24 67.9 24 5.81 Yes 73 -5.53 No 0 0 No -23 0.83 Yes 44 57.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6015479 - NM_000535 PMS2 0 . . . 3.63 72.22 35 5.99 Yes 4 0.68 No 0 0 No -34 0.44 No 49 41.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47802669 + NM_000251 MSH2 0 . . . 1.04 67.14 24 5.34 No 48 0.84 Yes 0 0 No -23 0.62 No 42 95.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84387735 - NM_139076 FAM175A 0 . . . 2.1 76.63 17 4.8 No 58 -3.88 No 0 0 No -16 0.28 No 43 65.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90957801 - NM_002485 NBN 0 . . . 8.93 88.98 46 7.38 Yes 73 1.32 Yes 0 0 No -21 0.6 No 50 89.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68566305 + NM_133509 RAD51B 0 . . . 4.14 76.4 22 6.96 Yes 4 0.31 No 0 0 No -29 0.59 No 42 68.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41238103 - NM_007294 BRCA1 0 . . . 2.3 61.81 29 5.65 Yes 3 -1.03 No 0 0 No -28 0.69 Yes 55 39.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215612689 - NM_000465 BARD1 0 . . . 2.78 65.17 23 5.82 Yes 53 1 Yes 0 0 No -30 0.63 No 44 78.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108213574 + NM_000051 ATM 0 . . . 0.49 66.2 29 7.23 Yes 73 -5.68 No 0 0 No -28 0.93 Yes 47 47.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190715049 + NM_000534 PMS1 0 . . . 1.96 71.34 56 6.7 Yes 71 -4.49 No 0 0 No -23 0.5 No 45 56.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68443332 + NM_133509 RAD51B 0 . . . 0.75 57.92 9 3.87 No 41 -3.64 No 0 0 No -29 0.84 Yes 38 39.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68645173 + NM_133509 RAD51B 0 . . . 2.47 81.13 31 5.53 No 53 0.69 No 0 0 No -24 0.45 No 51 52.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68903273 + NM_133509 RAD51B 0 . . . 4.41 70.35 27 5.2 No 44 0.16 No 0 0 No -50 0.42 No 46 79.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131976552 + NM_005732 RAD50 0 . . . 5.41 73.55 27 5.65 Yes 40 0.2 No 0 0 No -27 0.59 No 44 79.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68675914 + NM_133509 RAD51B 0 . . . 0.22 72.88 18 4.14 No 39 0.04 No 0 0 No -21 0.69 Yes 19 91.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68292015 + NM_133509 RAD51B 0 . . . 4.16 69.89 15 5 No 68 0.26 No 0 0 No -21 0.53 No 45 54.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56803520 + NM_058216 RAD51C 0 . . . 8.8 78.57 15 5.52 No 31 1.17 Yes 0 0 No -19 0.4 No 33 51.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47656484 + NM_000251 MSH2 0 . . . 2.3 84.41 31 5.43 No 18 0.57 No 0 0 No -30 0.59 No 40 93.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90962958 - NM_002485 NBN 0 . . . 4.36 70.54 32 5.16 No -2 -1.66 No 0 0 No -27 0.78 Yes 44 44.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105191383 + NM_021930 RINT1 0 . . . 8.28 91.79 21 4.47 No 4 1.23 Yes 0 0 No -20 0.85 Yes 43 62.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47729130 + NM_000251 MSH2 0 . . . 1.18 0 15 5.1 No 68 0.51 No 0 0 No -24 0.41 No 18 32.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37081836 + NM_000249 MLH1 0 . . . 1.52 69.27 21 5.88 Yes 41 -4 No 0 0 No -24 0.65 No 57 40.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69037128 + NM_133509 RAD51B 0 . . . 5.61 77.31 12 5.2 No 76 1.06 Yes 0 0 No -27 0.78 Yes 50 63.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41243277 - NM_007294 BRCA1 0 . . . 1.14 0 24 5.29 No 22 0.55 No 0 0 No -23 0.4 No 47 65.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68766662 + NM_133509 RAD51B 0 . . . 5.5 77.33 20 5.1 No 12 1.67 Yes 0 0 No -42 0.62 No 42 76.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47726881 + NM_000251 MSH2 0 . . . 3.29 78.8 23 5.37 No 67 2.19 Yes 0 0 No -22 0.75 Yes 14 51.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131978767 + NM_005732 RAD50 0 . . . 0.85 64.02 38 6.56 Yes 43 0.43 No 0 0 No -24 0.74 Yes 29 57.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108146249 + NM_000051 ATM 0 . . . 9.98 78.54 29 5.03 No 74 0.7 No 0 0 No -25 0.45 No 48 86.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84395755 - NM_139076 FAM175A 0 . . . 0.48 0 17 5.29 No 44 1.11 Yes 0 0 No -25 0.82 Yes 36 38.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131909697 + NM_005732 RAD50 0 . . . 0.48 0 16 5.2 No 13 -1.33 No 0 0 No -20 0.45 No 23 56.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105209523 + NM_021930 RINT1 0 . . . 8.76 85.42 23 5.95 Yes 61 2.1 Yes 0 0 No -22 0.4 No 45 79.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47708135 + NM_000251 MSH2 0 . . . 5.23 85.57 34 6.32 Yes 51 0.89 Yes 0 0 No -33 0.68 Yes 50 68.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48032202 + NM_000179 MSH6 0 . . . 0.87 0 19 5.36 No 31 0.54 No 0 0 No -22 0.72 Yes 32 68.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90963978 - NM_002485 NBN 0 . . . 7.08 88.28 20 5.48 No -3 -1.66 No 0 0 No -19 0.61 No 46 51.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90965690 - NM_002485 NBN 0 . . . 3.69 82.75 12 4.69 No 54 1.21 Yes 0 0 No -22 0.25 No 51 58.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90981104 - NM_002485 NBN 0 . . . 2.9 68.85 37 6.03 Yes 75 -3.39 No 0 0 No -36 0.86 Yes 44 31.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68830765 + NM_004360 CDH1 0 . . . 4.49 82.98 27 5.29 No 70 -2.77 No 0 0 No -27 0.92 Yes 26 68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190684469 + NM_000534 PMS1 0 . . . 2.62 81.74 12 3.75 No 37 0.8 Yes 0 0 No -25 0.62 No 42 90.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40988001 + NM_001164269 RAD51 0 . . . 3.16 66.32 36 5.98 Yes 45 1.47 Yes 0 0 No -22 0.62 No 39 77.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59816728 - NM_032043 BRIP1 0 . . . 1.63 64.19 17 4.67 No 62 1.02 Yes 0 0 No -41 0.52 No 45 30.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215618859 - NM_000465 BARD1 0 . . . 3.48 70.98 36 6.16 Yes 20 0.45 No 0 0 No -35 0.71 Yes 38 90.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59768334 - NM_032043 BRIP1 0 . . . 5.95 71.88 29 4.93 No 50 1.01 Yes 0 0 No -26 0.64 No 38 64.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68826455 + NM_133509 RAD51B 0 . . . 4.95 80.56 32 6.78 Yes 5 0.8 Yes 0 0 No -31 0.72 Yes 53 63.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68832992 + NM_004360 CDH1 0 . . . 0.66 74.85 27 5.62 Yes 59 1.15 Yes 0 0 No -26 0.81 Yes 38 56.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68570480 + NM_133509 RAD51B 0 . . . 1.75 0 38 6.54 Yes 60 0.16 No 0 0 No -22 0.73 Yes 43 41.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68756983 + NM_133509 RAD51B 0 . . . 2.52 59.71 24 3.93 No 60 1.99 Yes 0 0 No -23 0.94 Yes 49 46.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56804604 + NM_058216 RAD51C 0 . . . 2.55 87.45 23 6.32 Yes 33 1.36 Yes 0 0 No -22 0.94 Yes 50 51.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68727551 + NM_133509 RAD51B 0 . . . 5.99 81.33 28 5.44 No 4 0.98 Yes 0 0 No -21 0.82 Yes 48 75.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47628873 + NM_000251 MSH2 0 . . . 0.05 84.22 29 4.98 No 33 1.99 Yes 0 0 No -26 0.81 Yes 25 61.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59883113 - NM_032043 BRIP1 0 . . . 2.83 72.75 18 4.69 No 10 0.7 No 0 0 No -17 0.66 Yes 48 52.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69118599 + NM_133509 RAD51B 0 . . . 0.08 0 19 4.9 No 34 1.42 Yes 0 0 No -24 0.57 No 37 43.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131949431 + NM_005732 RAD50 0 . . . 3.05 77.08 38 7.67 Yes 50 1.06 Yes 0 0 No -37 0.89 Yes 33 45.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68715294 + NM_133509 RAD51B 0 . . . 5.81 64.89 10 6.08 Yes 39 1.82 Yes 0 0 No -31 0.38 No 19 53.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37073354 + NM_000249 MLH1 0 . . . 2.46 75.36 32 5.2 No -2 1.41 Yes 0 0 No -31 0.53 No 60 43.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29117119 - NM_001005735 CHEK2 0 . . . 5.43 90.84 30 5.83 Yes 74 0.8 Yes 0 0 No -29 0.84 Yes 44 58.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47631824 + NM_000251 MSH2 0 . . . 3.17 79.06 63 6.09 Yes 4 0.33 No 0 0 No -25 0.39 No 46 92.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90985650 - NM_002485 NBN 0 . . . 6.48 85.05 19 4.47 No 15 0.29 No 0 0 No -18 0.86 Yes 45 67.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131913130 + NM_005732 RAD50 0 . . . 2.18 71.61 29 5.37 No 46 1.52 Yes 0 0 No -26 0.5 No 24 50.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69144631 + NM_133509 RAD51B 0 . . . 4.09 0 10 4.69 No 48 -1.93 No 0 0 No -21 0.41 No 42 88.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41016725 + NM_001164269 RAD51 0 . . . 0.93 83.28 33 7.2 Yes 21 1.45 Yes 0 0 No -32 0.52 No 37 95.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90956943 - NM_002485 NBN 0 . . . 5.66 75.04 22 5.65 Yes 2 1.22 Yes 0 0 No -25 0.7 Yes 46 52.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59806078 - NM_032043 BRIP1 0 . . . 6.77 79.55 15 4.58 No 4 1.48 Yes 0 0 No -32 0.78 Yes 46 67.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29083767 - NM_001005735 CHEK2 0 . . . 5.29 87.95 52 7.06 Yes 67 1.15 Yes 0 0 No -34 0.52 No 43 78.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131899396 + NM_005732 RAD50 0 . . . 0.81 68.14 27 3.8 No 67 0.09 No 0 0 No -26 0.83 Yes 32 25.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40989857 + NM_001164269 RAD51 0 . . . 0.41 63.93 19 5.72 Yes 39 1.45 Yes 0 0 No -22 0.33 No 43 47.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7583299 - NM_000546 TP53 0 . . . 2.32 66.66 27 6.19 Yes 8 0.38 No 0 0 No -15 0.53 No 50 68.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32901651 + NM_000059 BRCA2 0 . . . 5.6 69.7 28 5.26 No 19 1.35 Yes 0 0 No -19 0.33 No 39 92.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90969324 - NM_002485 NBN 0 . . . 0.96 82.5 26 5.05 No 59 0.91 Yes 0 0 No -25 0.48 No 48 50.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75505420 - NM_001040108 MLH3 0 . . . 2.18 76.01 17 6.4 Yes 74 1.14 Yes 0 0 No -16 0.7 Yes 38 70.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47799923 + NM_000251 MSH2 0 . . . 2.46 81.5 27 6.4 Yes 3 0.34 No 0 0 No -26 0.89 Yes 55 33.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59891537 - NM_032043 BRIP1 0 . . . 1.52 67.24 16 5.29 No 46 1.1 Yes 0 0 No -19 0.4 No 12 85.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108139912 + NM_000051 ATM 0 . . . 0.81 0 10 4 No 50 0.92 Yes 0 0 No -27 0.92 Yes 39 39.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68478210 + NM_133509 RAD51B 0 . . . 4.73 72.09 16 5.05 No 49 0.47 No 0 0 No -20 0.69 Yes 42 55.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190713227 + NM_000534 PMS1 0 . . . 4.06 76.04 40 6.78 Yes 33 0.01 No 0 0 No -27 0.86 Yes 37 88.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41248609 - NM_007294 BRCA1 0 . . . 1.83 82.32 32 5.92 Yes 73 0.72 No 0 0 No -31 0.5 No 49 69.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807106 + NM_004360 CDH1 0 . . . 2.11 0 31 7.61 Yes 58 -2.27 No 0 0 No -24 0.76 Yes 31 68.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41253510 - NM_007294 BRCA1 0 . . . 1.15 0 82 6.96 Yes -2 0.67 No 0 0 No -37 0.37 No 42 34.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108148355 + NM_000051 ATM 0 . . . 6.51 80.36 18 4.9 No 6 1.53 Yes 0 0 No -17 0.43 No 52 72.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68560788 + NM_133509 RAD51B 0 . . . 2.69 76.3 21 5.09 No -3 -1.59 No 0 0 No -20 0.67 Yes 49 42.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37047408 + NM_000249 MLH1 0 . . . 8.02 84.55 21 5.81 Yes 1 1.73 Yes 0 0 No -20 0.82 Yes 28 49.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190683494 + NM_000534 PMS1 0 . . . 1.27 80.78 36 5.69 Yes 53 1 Yes 0 0 No -25 0.45 No 52 51.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68449824 + NM_133509 RAD51B 0 . . . 1.41 67.48 21 4.22 No 9 1.3 Yes 0 0 No -20 0.79 Yes 49 87.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105176415 + NM_021930 RINT1 0 . . . 3.5 70.45 32 6.76 Yes 17 -1.47 No 0 0 No -31 0.69 Yes 53 43.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190704057 + NM_000534 PMS1 0 . . . 0.08 0 36 6.48 Yes 25 0.2 No 0 0 No -24 0.84 Yes 45 46.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68714074 + NM_133509 RAD51B 0 . . . 1.91 71.96 25 5.28 No 5 0.08 No 0 0 No -24 0.92 Yes 42 52.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108179064 + NM_000051 ATM 0 . . . 8.65 80.72 28 5.83 Yes 19 1.12 Yes 0 0 No -28 0.72 Yes 36 67.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68462249 + NM_133509 RAD51B 0 . . . 1.23 0 40 6.48 Yes 23 1.57 Yes 0 0 No -30 0.72 Yes 35 97.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68907713 + NM_133509 RAD51B 0 . . . 3.05 71.84 17 4.75 No 24 0.99 Yes 0 0 No -20 0.75 Yes 46 96.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47793327 + NM_000251 MSH2 0 . . . 2.73 66.12 17 5.61 Yes 59 -1.6 No 0 0 No -25 0.56 No 34 73.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68798981 + NM_133509 RAD51B 0 . . . 3.18 80.38 20 4.3 No 7 0.83 Yes 0 0 No -19 0.86 Yes 51 67.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48008814 + NM_000179 MSH6 0 . . . 2.96 80.12 25 6.16 Yes 8 1.2 Yes 0 0 No -24 0.74 Yes 50 88.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45797892 - NM_001048171 MUTYH 0 . . . 5.07 80.72 17 5.1 No 33 -1.92 No 0 0 No -27 0.73 Yes 54 41.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69092061 + NM_133509 RAD51B 0 . . . 1.47 69.77 26 5.1 No 16 0.7 No 0 0 No -25 0.79 Yes 42 65.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68775755 + NM_004360 CDH1 0 . . . 5.74 82.77 23 4.55 No 67 0.22 No 0 0 No -26 0.87 Yes 49 61.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59938793 - NM_032043 BRIP1 0 . . . 0.42 0 88 9.9 Yes 0 0.29 No 0 0 No -22 0.27 No 43 45.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68945334 + NM_133509 RAD51B 0 . . . 2.44 83.92 14 5.41 No -1 0.77 Yes 0 0 No -23 0.23 No 45 63.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68688957 + NM_133509 RAD51B 0 . . . 5.56 80.71 16 6.11 Yes 61 0.13 No 0 0 No -31 0.6 No 49 57.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68815428 + NM_004360 CDH1 0 . . . 0.87 83.28 10 4 No 7 1.32 Yes 0 0 No -27 0.55 No 42 82.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68583128 + NM_133509 RAD51B 0 . . . 1.99 71.84 32 5.66 Yes 76 -5.88 No 0 0 No -53 0.65 No 45 55.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68349739 + NM_133509 RAD51B 0 . . . 0.67 80.49 11 5.47 No 37 1.55 Yes 0 0 No -49 0.61 No 26 70.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190741291 + NM_000534 PMS1 0 . . . 0.25 70.96 17 4.48 No 73 1.63 Yes 0 0 No -16 0.35 No 37 80.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45804924 - NM_001048171 MUTYH 0 . . . 1.41 0 15 7.71 Yes 22 0.32 No 0 0 No -23 0.55 No 46 84.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68856288 + NM_004360 CDH1 0 . . . 4.46 77.9 67 6.75 Yes 34 1.46 Yes 0 0 No -30 0.84 Yes 24 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68955463 + NM_133509 RAD51B 0 . . . 4.56 79.48 25 4.03 No 64 1.96 Yes 0 0 No -24 0.63 No 18 70.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84391419 - NM_139076 FAM175A 0 . . . 0.55 64.27 28 5.35 No -4 0.57 No 0 0 No -27 0.41 No 36 41.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108094459 + NM_000051 ATM 0 . . . 2.18 69.22 25 5.92 Yes 52 -4.69 No 0 0 No -24 0.58 No 43 69.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47802865 + NM_000251 MSH2 0 . . . 4.86 80.08 20 7.13 Yes 44 0.23 No 0 0 No -19 0.58 No 42 49.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131892023 + NM_005732 RAD50 0 . . . 7.8 81.24 18 4.69 No 13 1.44 Yes 0 0 No -17 0.45 No 45 68.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47682598 + NM_000251 MSH2 0 . . . 1.85 71.54 17 4.95 No 73 0.99 Yes 0 0 No -25 0.65 No 53 52.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68969488 + NM_133509 RAD51B 0 . . . 7.12 72.79 15 5.52 No 21 -2.23 No 0 0 No -28 0.42 No 32 68.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1223740 + NM_000455 STK11 0 . . . 1.07 64.83 45 7.51 Yes 63 -3.67 No 0 0 No -25 0.9 Yes 62 33.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68942573 + NM_133509 RAD51B 0 . . . 1.42 59.88 23 5.09 No 15 0.44 No 0 0 No -22 0.92 Yes 43 80.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7575464 - NM_000546 TP53 0 . . . 2.89 68.34 16 4.51 No 21 1.57 Yes 0 0 No -28 0.37 No 37 83.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69003433 + NM_133509 RAD51B 0 . . . 4.13 66.09 24 4.9 No 59 0.36 No 0 0 No -23 0.54 No 43 91.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47640565 + NM_000251 MSH2 0 . . . 6.01 81.43 22 6.48 Yes 21 1.48 Yes 0 0 No -21 0.62 No 42 69.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32964351 + NM_000059 BRCA2 0 . . . 6.76 73.84 18 6.16 Yes 31 0.9 Yes 0 0 No -17 0.84 Yes 50 77.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41198966 - NM_007294 BRCA1 0 . . . 6.79 83.37 25 5 No 13 0.74 No 0 0 No -24 0.52 No 45 58.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68964040 + NM_133509 RAD51B 0 . . . 2.22 73.44 51 7.67 Yes 58 0.64 No 0 0 No -26 0.61 No 62 64.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68363688 + NM_133509 RAD51B 0 . . . 6.46 82.19 14 4.47 No 71 -5.22 No 0 0 No -21 0.31 No 33 57.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68471137 + NM_133509 RAD51B 0 . . . 3.63 85.4 50 6.97 Yes 28 0.05 No 0 0 No -37 0.45 No 42 72.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69130994 + NM_133509 RAD51B 0 . . . 6.01 67.47 30 5.89 Yes 24 2.22 Yes 0 0 No -29 0.63 No 34 95.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6036653 - NM_000535 PMS2 0 . . . 0.42 74.73 10 4 No 32 1.13 Yes 0 0 No -37 0.7 Yes 15 43.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59847302 - NM_032043 BRIP1 0 . . . 1.96 65.12 21 4.32 No 15 -1.31 No 0 0 No -20 0.56 No 43 86.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190685396 + NM_000534 PMS1 0 . . . 8.23 85.9 24 5.48 No 28 0.61 No 0 0 No -23 0.68 Yes 46 95.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131938538 + NM_005732 RAD50 0 . . . 1.36 0 13 5.2 No 65 0 No 0 0 No -25 0.46 No 37 85.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56807903 + NM_058216 RAD51C 0 . . . 1.06 0 29 6.32 Yes 52 0.43 No 0 0 No -28 0.79 Yes 37 85.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59814488 - NM_032043 BRIP1 0 . . . 8.27 85.37 38 5.29 No 19 1.16 Yes 0 0 No -31 0.89 Yes 47 84.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68408163 + NM_133509 RAD51B 0 . . . 6.96 81.72 16 8.03 Yes 59 -1.6 No 0 0 No -32 0.46 No 40 47.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59850177 - NM_032043 BRIP1 0 . . . 2.38 83.13 41 8.02 Yes 67 1.34 Yes 0 0 No -25 0.84 Yes 39 79.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56802182 + NM_058216 RAD51C 0 . . . 1.43 66.81 16 4.69 No 29 0.84 Yes 0 0 No -38 0.74 Yes 29 60.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47739078 + NM_000251 MSH2 0 . . . 4.24 68.22 18 5.39 No 4 0.57 No 0 0 No -17 0.55 No 43 50.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68541222 + NM_133509 RAD51B 0 . . . 6.08 84.19 58 9.81 Yes 5 0.63 No 0 0 No -22 0.66 No 49 47.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69050954 + NM_133509 RAD51B 0 . . . 5.47 78.73 42 6.47 Yes 35 2.15 Yes 0 0 No -23 0.45 No 39 46.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23643931 - NM_024675 PALB2 0 . . . 2.24 71.14 12 5.22 No 9 1.41 Yes 0 0 No -32 0.33 No 23 50.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68636866 + NM_133509 RAD51B 0 . . . 3.93 0 33 6.54 Yes 61 1.7 Yes 0 0 No -28 0.52 No 48 55.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90945770 - NM_002485 NBN 0 . . . 1.01 75.37 20 5.1 No 5 1.23 Yes 0 0 No -19 0.84 Yes 47 62.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33441868 - NM_002878 RAD51D 0 . . . 2.83 68.39 16 5.57 Yes 27 0.96 Yes 0 0 No -42 0.28 No 44 48.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68355738 + NM_133509 RAD51B 0 . . . 3.97 0 15 5.46 No 10 1.91 Yes 0 0 No -14 0.4 No 48 83.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47712242 + NM_000251 MSH2 0 . . . 2.32 65.59 63 8.11 Yes 30 0.12 No 0 0 No -43 0.36 No 28 51.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33427521 - NM_002878 RAD51D 0 . . . 6.53 80.29 22 4.9 No 46 2.66 Yes 0 0 No -19 0.33 No 12 73.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69080723 + NM_133509 RAD51B 0 . . . 1.19 61.6 15 6.02 Yes 14 0.2 No 0 0 No -23 0.92 Yes 44 58.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21991375 - NM_000077 CDKN2A 0 . . . 5.57 70.18 29 7.14 Yes 16 0.55 No 0 0 No -27 0.76 Yes 42 84.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108206222 + NM_000051 ATM 0 . . . 1.54 62.04 26 5.99 Yes 52 1.22 Yes 0 0 No -25 0.79 Yes 57 33.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68787274 + NM_133509 RAD51B 0 . . . 0.76 71.62 34 7.53 Yes 7 0.48 No 0 0 No -29 0.62 No 51 43.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108186856 + NM_000051 ATM 0 . . . 4.47 88.81 26 5.08 No 54 0.16 No 0 0 No -26 0.63 No 48 77.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108163853 + NM_000051 ATM 0 . . . 1.56 74.7 27 5.19 No 9 0.94 Yes 0 0 No -26 0.84 Yes 49 83.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41260697 - NM_007294 BRCA1 0 . . . 4.77 87.85 28 5.19 No 58 1.33 Yes 0 0 No -27 0.78 Yes 14 43.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84380439 - NM_139076 FAM175A 0 . . . 4.33 0 29 5.48 No 28 0.42 No 0 0 No -28 0.9 Yes 34 61.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37088659 + NM_000249 MLH1 0 . . . 3.36 77.45 35 5.87 Yes 11 1.01 Yes 0 0 No -34 0.92 Yes 47 70.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21985763 - NM_000077 CDKN2A 0 . . . 3.97 80.57 16 4.59 No 71 -3.88 No 0 0 No -20 0.78 Yes 44 76.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47667087 + NM_000251 MSH2 0 . . . 2.62 67.59 61 9.06 Yes 49 0.94 Yes 0 0 No -54 0.76 Yes 48 48.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59791694 - NM_032043 BRIP1 0 . . . 0.08 66.92 19 5.22 No -1 0.18 No 0 0 No -27 0.84 Yes 32 52.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52433884 - NM_004656 BAP1 0 . . . 10.09 85.79 24 5.48 No 43 1.82 Yes 0 0 No -23 0.58 No 44 48.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68863415 + NM_133509 RAD51B 0 . . . 1.55 61.47 35 6.06 Yes 67 0.24 No 0 0 No -23 0.85 Yes 24 77.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108159207 + NM_000051 ATM 0 . . . 2.87 62.93 28 6.16 Yes 68 -3.68 No 0 0 No -31 0.33 No 37 63.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68506116 + NM_133509 RAD51B 0 . . . 0.68 76.63 17 4.8 No 67 -4.95 No 0 0 No -16 0.34 No 43 42.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510104 - NM_001040108 MLH3 0 . . . 6.97 87.41 27 6.4 Yes 47 0.9 Yes 0 0 No -26 0.5 No 51 38.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68640413 + NM_133509 RAD51B 0 . . . 1.28 71.44 30 5.74 Yes 14 1.2 Yes 0 0 No -29 0.84 Yes 44 72.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108116448 + NM_000051 ATM 0 . . . 2.85 64.7 38 6.45 Yes 10 0.48 No 0 0 No -38 0.55 No 45 70.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29119836 - NM_001005735 CHEK2 0 . . . 2.15 73.28 20 4.67 No 63 1.53 Yes 0 0 No -19 0.85 Yes 50 86.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47769376 + NM_000251 MSH2 0 . . . 5.24 81.95 26 9.03 Yes 14 2 Yes 0 0 No -25 0.66 No 44 94.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68340121 + NM_133509 RAD51B 0 . . . 2.71 76.12 18 4.9 No 34 -2.37 No 0 0 No -37 0.69 Yes 47 53.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68838469 + NM_004360 CDH1 0 . . . 4.89 77.26 22 5.1 No 72 -3.46 No 0 0 No -25 0.76 Yes 48 65.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68922995 + NM_133509 RAD51B 0 . . . 1.61 66.76 37 6.13 Yes 35 -4.3 No 0 0 No -29 0.33 No 39 37.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32970229 + NM_000059 BRCA2 0 . . . 1.22 76.47 15 4.75 No 8 0.47 No 0 0 No -51 0.61 No 50 84.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21989849 - NM_000077 CDKN2A 0 . . . 9.49 86.29 20 5.57 Yes 70 -2.97 No 0 0 No -19 0.74 Yes 45 56.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47705774 + NM_000251 MSH2 0 . . . 4.89 75.9 29 6.4 Yes 32 1.03 Yes 0 0 No -28 0.87 Yes 40 67.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152364667 - NM_005431 XRCC2 0 . . . 2.96 77.22 20 5.1 No 52 1.06 Yes 0 0 No -21 0.56 No 38 69.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89682138 + NM_000314 PTEN 0 . . . 2.91 65.31 20 4.9 No 55 0.16 No 0 0 No -19 0.83 Yes 37 65.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68301427 + NM_133509 RAD51B 0 . . . 7.74 81.63 28 5.83 Yes 53 1.47 Yes 0 0 No -27 0.73 Yes 46 78.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68339245 + NM_133509 RAD51B 0 . . . 0.09 0 24 3.79 No 29 -3.25 No 0 0 No -23 0.75 Yes 38 30.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152361801 - NM_005431 XRCC2 0 . . . 6.37 70.24 57 7.07 Yes 16 1.74 Yes 0 0 No -35 0.47 No 42 97.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108225160 + NM_000051 ATM 0 . . . 1.04 59.41 15 5 No 35 -1.66 No 0 0 No -55 0.4 No 44 41.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90983143 - NM_002485 NBN 0 . . . 4.15 80.31 38 7.24 Yes -2 0.99 Yes 0 0 No -43 0.4 No 53 92.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47794544 + NM_000251 MSH2 0 . . . 5.43 77.05 38 6.59 Yes 56 0.73 No 0 0 No -33 0.65 No 48 37.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69022424 + NM_133509 RAD51B 0 . . . 2.17 77.14 16 4.81 No 17 1.1 Yes 0 0 No -23 0.52 No 37 64.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108158891 + NM_000051 ATM 0 . . . 7.42 92.42 34 6.81 Yes 52 1.51 Yes 0 0 No -33 0.71 Yes 49 93.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104182127 - NM_001100119 XRCC3 0 . . . 3.16 72.81 60 7.08 Yes 29 0.98 Yes 0 0 No -44 0.73 Yes 41 52.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68406647 + NM_133509 RAD51B 0 . . . 3.25 69.87 54 7.04 Yes 76 -4.48 No 0 0 No -21 0.41 No 45 74.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68420998 + NM_133509 RAD51B 0 . . . 2.17 0 16 4.58 No 2 0.95 Yes 0 0 No -20 0.6 No 42 57.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68724267 + NM_133509 RAD51B 0 . . . 0.64 65.07 28 5.3 No 55 0.3 No 0 0 No -27 0.8 Yes 41 50.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68373386 + NM_133509 RAD51B 0 . . . 2.02 0 28 5.27 No 12 0.03 No 0 0 No -27 0.87 Yes 38 64.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59892922 - NM_032043 BRIP1 0 . . . 4.59 74.05 15 5.29 No 67 1.03 Yes 0 0 No -44 0.36 No 51 63.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59898475 - NM_032043 BRIP1 0 . . . 0.09 0 13 5.1 No 49 1.02 Yes 0 0 No -19 0.33 No 33 76.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68832345 + NM_004360 CDH1 0 . . . 3.34 80.83 20 5.1 No 27 0.43 No 0 0 No -19 0.46 No 42 56.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190686154 + NM_000534 PMS1 0 . . . 1.27 76.63 21 7.35 Yes 69 -5.09 No 0 0 No -20 0.85 Yes 43 59.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29085648 - NM_001005735 CHEK2 0 . . . 3.96 76.33 23 6.47 Yes -1 0.3 No 0 0 No -22 0.87 Yes 47 69.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59792866 - NM_032043 BRIP1 0 . . . 0.46 0 15 2.91 No 51 -2.8 No 0 0 No -14 0.37 No 50 85.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47752208 + NM_000251 MSH2 0 . . . 4.48 80.6 22 6.23 Yes 3 0.55 No 0 0 No -21 0.64 No 40 90.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108128448 + NM_000051 ATM 0 . . . 5.43 84.38 15 4.58 No 4 1.66 Yes 0 0 No -22 0.78 Yes 42 93.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47706132 + NM_000251 MSH2 0 . . . 3.5 68.34 21 5.08 No 23 1.57 Yes 0 0 No -20 0.74 Yes 35 55.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89675280 + NM_000314 PTEN 0 . . . 4.54 79.77 53 7.48 Yes 56 0.82 Yes 0 0 No -32 0.57 No 48 66.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37045831 + NM_000249 MLH1 0 . . . 1.93 77.8 28 6.14 Yes 6 1.17 Yes 0 0 No -34 0.7 Yes 47 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68374431 + NM_133509 RAD51B 0 . . . 1.92 0 27 5.38 No 71 1.26 Yes 0 0 No -42 0.47 No 46 59.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69129018 + NM_133509 RAD51B 0 . . . 3.42 78.41 13 5.18 No 40 1.42 Yes 0 0 No -24 0.35 No 37 46.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47641689 + NM_000251 MSH2 0 . . . 2.5 66.04 28 4.94 No 21 0.53 No 0 0 No -27 0.77 Yes 37 59.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1214441 + NM_000455 STK11 0 . . . 3.21 68.61 29 6.18 Yes 51 1.08 Yes 0 0 No -29 0.38 No 42 85.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59917850 - NM_032043 BRIP1 0 . . . 3.96 71.69 20 5.74 Yes 59 0.4 No 0 0 No -19 0.83 Yes 47 86.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215638511 - NM_000465 BARD1 0 . . . 3.35 73.57 28 5.39 No 75 -2.41 No 0 0 No -27 0.86 Yes 47 69.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59804979 - NM_032043 BRIP1 0 . . . 1.7 68.4 42 6.93 Yes 47 0.82 Yes 0 0 No -31 0.53 No 48 64.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69122937 + NM_133509 RAD51B 0 . . . 2.49 77.8 25 4.9 No 0 0.77 Yes 0 0 No -36 0.46 No 33 35.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152365029 - NM_005431 XRCC2 0 . . . 1.63 71.4 37 6.56 Yes 16 1.11 Yes 0 0 No -36 0.39 No 42 91.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47741932 + NM_000251 MSH2 0 . . . 6.07 85.02 30 4.98 No 5 1.23 Yes 0 0 No -24 0.53 No 45 76.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68697147 + NM_133509 RAD51B 0 . . . 4.41 72.42 25 6.13 Yes 10 0.68 No 0 0 No -24 0.5 No 48 43.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68805043 + NM_133509 RAD51B 0 . . . 3.98 76.9 20 5.44 No 6 -1.39 No 0 0 No -51 0.56 No 26 78.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190692694 + NM_000534 PMS1 0 . . . 4.71 84.17 29 7.34 Yes 46 0.19 No 0 0 No -28 0.94 Yes 44 50.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131973111 + NM_005732 RAD50 0 . . . 1.22 75.61 16 4.51 No 38 0.2 No 0 0 No -25 0.55 No 42 85.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21978522 - NM_000077 CDKN2A 0 . . . 2.61 73.88 36 6.84 Yes 5 0.34 No 0 0 No -35 0.59 No 44 54.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68768615 + NM_133509 RAD51B 0 . . . 1.46 73.95 63 6.29 Yes 61 1.54 Yes 0 0 No -24 0.45 No 44 45.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23621767 - NM_024675 PALB2 0 . . . 3.39 66.2 22 4.8 No 47 0.69 No 0 0 No -21 0.96 Yes 42 56.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152369579 - NM_005431 XRCC2 0 . . . 0.5 75.33 16 4.29 No -3 1.18 Yes 0 0 No -24 0.93 Yes 22 41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68289516 + NM_133509 RAD51B 0 . . . 4.44 83.14 40 4.76 No 9 0.23 No 0 0 No -39 0.48 No 45 85.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69147368 + NM_133509 RAD51B 0 . . . 4.59 74.42 15 5.04 No 12 1.03 Yes 0 0 No -25 0.42 No 41 49.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131906265 + NM_005732 RAD50 0 . . . 0.62 62.77 18 4.35 No 53 1.03 Yes 0 0 No -21 0.57 No 51 61.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68764285 + NM_133509 RAD51B 0 . . . 6.15 79.48 18 3.86 No 9 1 Yes 0 0 No -18 0.4 No 43 84.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68589482 + NM_133509 RAD51B 0 . . . 0.03 75.11 26 4.7 No 73 0.06 No 0 0 No -21 0.52 No 31 39.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40991723 + NM_001164269 RAD51 0 . . . 0.97 71.28 18 5.26 No 13 0.55 No 0 0 No -25 0.56 No 36 64.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84402258 - NM_139076 FAM175A 0 . . . 2.71 84.79 16 5.83 Yes 2 1.51 Yes 0 0 No -14 0.34 No 22 50.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68739587 + NM_133509 RAD51B 0 . . . 3.25 80.12 31 6.44 Yes 8 1.2 Yes 0 0 No -30 0.45 No 50 87.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32942521 + NM_000059 BRCA2 0 . . . 2.16 69 9 3.87 No 46 0.11 No 0 0 No -28 0.51 No 35 82.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108225902 + NM_000051 ATM 0 . . . 6.43 88.65 13 6.06 Yes 37 0.25 No 0 0 No -32 0.53 No 44 47.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68806845 + NM_133509 RAD51B 0 . . . 2.03 64.07 28 5.39 No 29 1.04 Yes 0 0 No -27 0.96 Yes 29 31.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75483866 - NM_001040108 MLH3 0 . . . 0.62 63.76 37 6.04 Yes 53 1.26 Yes 0 0 No -24 0.77 Yes 46 39.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68756924 + NM_133509 RAD51B 0 . . . 6.76 80.67 21 4.79 No 1 2.05 Yes 0 0 No -20 0.75 Yes 52 61.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108169244 + NM_000051 ATM 0 . . . 7.4 75.35 23 4.87 No 4 1.23 Yes 0 0 No -22 0.66 Yes 42 58.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68690316 + NM_133509 RAD51B 0 . . . 2.65 74.07 22 7.13 Yes 43 -4.42 No 0 0 No -24 0.26 No 52 79.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68925064 + NM_133509 RAD51B 0 . . . 6.47 75.27 41 5.99 Yes 11 0.72 No 0 0 No -25 0.87 Yes 31 79.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215623263 - NM_000465 BARD1 0 . . . 4.99 76 24 5.46 No 74 0.46 No 0 0 No -23 0.65 No 41 62.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68839875 + NM_004360 CDH1 0 . . . 1.86 0 30 5.39 No 46 -2.19 No 0 0 No -22 0.41 No 26 81.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68429639 + NM_133509 RAD51B 0 . . . 3.71 73.94 23 4.85 No 1 0.89 Yes 0 0 No -49 0.42 No 46 53.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29119559 - NM_001005735 CHEK2 0 . . . 4.23 84.17 28 5.39 No 49 1.35 Yes 0 0 No -27 0.68 Yes 46 64.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47757788 + NM_000251 MSH2 0 . . . 2.39 67.31 33 4.7 No -4 0.74 No 0 0 No -32 0.68 Yes 40 87.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40990238 + NM_001164269 RAD51 0 . . . 3.55 63.4 24 6.46 Yes 71 -0.98 No 0 0 No -23 0.63 No 44 88.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152366026 - NM_005431 XRCC2 0 . . . 3.4 66.31 15 5.1 No -1 0.96 Yes 0 0 No -27 0.61 No 42 58.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68974700 + NM_133509 RAD51B 0 . . . 1.3 64.23 29 6.71 Yes 19 -2.15 No 0 0 No -23 0.66 No 39 79.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104162845 - NM_001100119 XRCC3 0 . . . 0.33 71.48 23 4.77 No 71 -5.48 No 0 0 No -22 0.91 Yes 41 42.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7568864 - NM_000546 TP53 0 . . . 0.06 73.52 23 5.2 No 21 1.12 Yes 0 0 No -22 0.76 Yes 52 46.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69029303 + NM_133509 RAD51B 0 . . . 0.07 0 16 4.77 No 16 1.83 Yes 0 0 No -19 0.38 No 42 87.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69017770 + NM_133509 RAD51B 0 . . . 7.13 83.11 10 5 No -3 0.02 No 0 0 No -26 0.61 No 47 51.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41272617 - NM_007294 BRCA1 0 . . . 5.2 85.02 13 5.21 No 5 1.23 Yes 0 0 No -30 0.76 Yes 53 80.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32966389 + NM_000059 BRCA2 0 . . . 2.97 77.02 15 5.21 No 32 1.23 Yes 0 0 No -26 0.85 Yes 48 86.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190725232 + NM_000534 PMS1 0 . . . 6.21 80.48 24 5.32 No 11 0.1 No 0 0 No -23 0.62 No 47 73.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68402796 + NM_133509 RAD51B 0 . . . 2.3 66.85 17 4.8 No 63 0.45 No 0 0 No -32 0.32 No 38 40.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131902145 + NM_005732 RAD50 0 . . . 2.22 67.82 37 6.31 Yes 25 -2.35 No 0 0 No -36 0.5 No 44 79.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94220855 - NM_005591 MRE11 0 . . . 1.46 67.87 44 7.42 Yes 70 0.63 No 0 0 No -43 0.94 Yes 50 27.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215616153 - NM_000465 BARD1 0 . . . 0.28 74.23 37 6.32 Yes 69 -5.66 No 0 0 No -36 0.92 Yes 46 70.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29131626 - NM_001005735 CHEK2 0 . . . 8.28 83.76 69 6.18 Yes 21 0.86 Yes 0 0 No -21 0.72 Yes 42 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68758104 + NM_133509 RAD51B 0 . . . 1.87 80.12 18 5.38 No 10 1.4 Yes 0 0 No -17 0.83 Yes 48 80.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90979546 - NM_002485 NBN 0 . . . 0.42 71.72 36 6.16 Yes 28 1.09 Yes 0 0 No -35 0.54 No 52 43.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33431020 - NM_002878 RAD51D 0 . . . 4.12 76.4 14 5.8 Yes 9 0.5 No 0 0 No -28 0.7 Yes 49 56.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69150567 + NM_133509 RAD51B 0 . . . 7.24 72.43 28 5.21 No 12 1.05 Yes 0 0 No -49 0.82 Yes 46 87.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89690250 + NM_000314 PTEN 0 . . . 6.85 87.38 26 4.49 No 7 0.81 Yes 0 0 No -25 0.48 No 51 60.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131965356 + NM_005732 RAD50 0 . . . 5.16 83.55 25 6.58 Yes 7 1.14 Yes 0 0 No -22 0.63 No 44 63.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68862772 + NM_004360 CDH1 0 . . . 4.7 75.45 31 4.34 No 19 -2.67 No 0 0 No -33 0.68 Yes 36 80.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59931041 - NM_032043 BRIP1 0 . . . 3.42 69.81 31 8.06 Yes 65 0.57 No 0 0 No -30 0.9 Yes 40 64.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215633155 - NM_000465 BARD1 0 . . . 7.61 81.94 14 5.2 No 29 1.03 Yes 0 0 No -27 0.66 No 49 77.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89689321 + NM_000314 PTEN 0 . . . 7.92 85.66 29 6.79 Yes 28 1.63 Yes 0 0 No -28 0.86 Yes 41 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68657500 + NM_133509 RAD51B 0 . . . 4.96 0 20 6.16 Yes 57 1.96 Yes 0 0 No -19 0.37 No 49 49.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37063765 + NM_000249 MLH1 0 . . . 6.91 76.52 12 4.24 No 51 0.71 No 0 0 No -57 0.56 No 46 66.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68610037 + NM_133509 RAD51B 0 . . . 0.56 0 20 5.23 No 42 0.11 No 0 0 No -20 0.4 No 43 57.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94162075 - NM_005591 MRE11 0 . . . 8.69 81.67 28 5.38 No 70 1.27 Yes 0 0 No -27 0.46 No 40 62.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89730224 + NM_000314 PTEN 0 . . . 0.59 0 46 6.18 Yes 5 0.67 No 0 0 No -26 0.67 Yes 41 68.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6029011 - NM_000535 PMS2 0 . . . 0.35 71.93 16 4.69 No 67 1.17 Yes 0 0 No -20 0.4 No 17 43.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59774156 - NM_032043 BRIP1 0 . . . 1.42 72.26 19 5.81 Yes 30 1.06 Yes 0 0 No -18 0.79 Yes 28 39.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37053100 + NM_000249 MLH1 0 . . . 5.2 81.36 28 5.27 No 47 0.65 No 0 0 No -43 0.65 No 44 53.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89661897 + NM_000314 PTEN 0 . . . 5.77 83.84 28 5.38 No 68 0.6 No 0 0 No -27 0.47 No 39 49.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41205514 - NM_007294 BRCA1 0 . . . 5.2 85.02 36 5.97 Yes 5 1.09 Yes 0 0 No -25 0.56 No 53 76.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52435150 - NM_004656 BAP1 0 . . . 6.15 74.26 29 5.59 Yes 18 0.14 No 0 0 No -28 0.62 No 45 59.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131895708 + NM_005732 RAD50 0 . . . 4.56 80.15 18 5.29 No 55 0.13 No 0 0 No -28 0.57 No 50 36.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89668049 + NM_000314 PTEN 0 . . . 3.49 74.39 28 5.38 No -4 0.58 No 0 0 No -27 0.6 No 35 93.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56782765 + NM_058216 RAD51C 0 . . . 0.62 70.42 16 4.57 No 75 0.02 No 0 0 No -22 0.46 No 49 50.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59839356 - NM_032043 BRIP1 0 . . . 4.35 76.62 27 5.74 Yes 60 0.5 No 0 0 No -26 0.65 No 44 41.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68651842 + NM_133509 RAD51B 0 . . . 2.55 80.46 27 4.26 No 50 -1.53 No 0 0 No -26 0.57 No 36 52.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90989386 - NM_002485 NBN 0 . . . 2.92 70.44 22 5.2 No 33 -4.04 No 0 0 No -21 0.4 No 39 91.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68696726 + NM_133509 RAD51B 0 . . . 4.17 74.92 17 5.57 Yes 33 0.84 Yes 0 0 No -27 0.39 No 52 62.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33446282 - NM_002878 RAD51D 0 . . . 1.14 56.53 15 4.58 No 23 0.31 No 0 0 No -39 0.43 No 21 72.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68336232 + NM_133509 RAD51B 0 . . . 1.22 75.38 23 5.08 No 45 -2.64 No 0 0 No -22 0.59 No 50 42.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47780920 + NM_000251 MSH2 0 . . . 2.33 70.86 34 6.77 Yes -1 0.59 No 0 0 No -33 0.75 Yes 59 51.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108233888 + NM_000051 ATM 0 . . . 4.92 0 26 4.7 No 61 0.74 No 0 0 No -25 0.4 No 41 50.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90994760 - NM_002485 NBN 0 . . . 2.56 81.2 28 5.47 No 52 -3.68 No 0 0 No -27 0.6 No 48 86.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47641892 + NM_000251 MSH2 0 . . . 3.45 84.04 24 4.49 No 61 2.23 Yes 0 0 No -23 0.87 Yes 51 70.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47703186 + NM_000251 MSH2 0 . . . 4.43 83.37 26 6.68 Yes 24 1.23 Yes 0 0 No -28 0.52 No 53 49.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68416980 + NM_133509 RAD51B 0 . . . 3.32 83.4 31 5.48 No 52 0.5 No 0 0 No -30 0.75 Yes 50 65.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69108597 + NM_133509 RAD51B 0 . . . 7.01 86.44 9 3.55 No 69 0.69 No 0 0 No -55 0.73 Yes 47 56.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68680040 + NM_133509 RAD51B 0 . . . 1.48 0 15 4.58 No 57 0.96 Yes 0 0 No -32 0.42 No 46 80.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108198067 + NM_000051 ATM 0 . . . 3.88 81.87 21 4.67 No 55 0.8 Yes 0 0 No -20 0.59 No 49 50.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68563256 + NM_133509 RAD51B 0 . . . 2.31 62.71 21 6.25 Yes 20 -3.08 No 0 0 No -20 0.58 No 39 60.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29104153 - NM_001005735 CHEK2 0 . . . 0.28 69.47 17 4.8 No 73 -1.3 No 0 0 No -60 0.33 No 44 72.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68333860 + NM_133509 RAD51B 0 . . . 5.24 73.06 23 5.08 No 2 0.33 No 0 0 No -23 0.48 No 50 70.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47650822 + NM_000251 MSH2 0 . . . 4.82 79.55 29 4.23 No 58 1.01 Yes 0 0 No -21 0.64 No 55 62.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68863779 + NM_133509 RAD51B 0 . . . 5.82 83.9 51 6.18 Yes 6 0.67 No 0 0 No -19 0.5 No 49 62.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68408763 + NM_133509 RAD51B 0 . . . 6.45 74.94 20 5.48 No 20 0.1 No 0 0 No -19 0.57 No 41 79.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68791970 + NM_004360 CDH1 0 . . . 0.5 80.37 29 5.33 No 13 0.78 Yes 0 0 No -28 0.53 No 50 78.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68487945 + NM_133509 RAD51B 0 . . . 1.37 73.42 24 5.14 No 0 0.81 Yes 0 0 No -23 0.44 No 53 58.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131892123 + NM_005732 RAD50 0 . . . 1.81 82.8 30 5.48 No 66 1.25 Yes 0 0 No -27 0.74 Yes 45 65.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190710781 + NM_000534 PMS1 0 . . . 0.17 66.22 53 7.68 Yes 12 0.88 Yes 0 0 No -41 0.48 No 46 68.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68359505 + NM_133509 RAD51B 0 . . . 1.66 70.33 24 4.48 No -1 1.2 Yes 0 0 No -26 0.86 Yes 55 51.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47713687 + NM_000251 MSH2 0 . . . 0.35 70.95 12 3.55 No 76 1.49 Yes 0 0 No -21 0.44 No 16 73.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108128842 + NM_000051 ATM 0 . . . 2.75 78.12 25 5.37 No 41 1.17 Yes 0 0 No -24 0.93 Yes 47 60.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215612319 - NM_000465 BARD1 0 . . . 5.59 71.45 38 6.41 Yes 50 1 Yes 0 0 No -29 0.53 No 38 68.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68316807 + NM_133509 RAD51B 0 . . . 3.86 85.66 28 4.8 No 48 1.5 Yes 0 0 No -27 0.74 Yes 49 42.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59890818 - NM_032043 BRIP1 0 . . . 0.84 0 20 5.74 Yes 71 -5.07 No 0 0 No -19 0.4 No 44 50.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69026613 + NM_133509 RAD51B 0 . . . 6.54 72.16 22 4.92 No NA NA NA 0 0 No -21 0.55 No 48 63.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59806475 - NM_032043 BRIP1 0 . . . 1.94 80.12 31 5.36 No 5 0.95 Yes 0 0 No -30 0.83 Yes 53 74.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41023824 + NM_001164269 RAD51 0 . . . 4.91 91.87 16 6.7 Yes 59 -3.51 No 0 0 No -42 0.62 No 48 97.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68864860 + NM_004360 CDH1 0 . . . 0.43 78.59 15 4.73 No 61 -4.2 No 0 0 No -24 0.83 Yes 49 52.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68670137 + NM_133509 RAD51B 0 . . . 0.39 64.93 25 5.01 No 15 0.45 No 0 0 No -21 0.52 No 43 94.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68508991 + NM_133509 RAD51B 0 . . . 3.97 73.59 26 5 No 71 0.44 No 0 0 No -25 0.48 No 52 58.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68470315 + NM_133509 RAD51B 0 . . . 6.07 83.24 21 5.2 No 28 -0.84 No 0 0 No -20 0.71 Yes 43 74.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69037686 + NM_133509 RAD51B 0 . . . 0.41 0 26 7.81 Yes -2 0.34 No 0 0 No -25 0.9 Yes 44 65.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56812219 + NM_058216 RAD51C 0 . . . 6.01 69.09 19 5 No 23 1.62 Yes 0 0 No -26 0.56 No 40 76.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32931727 + NM_000059 BRCA2 0 . . . 0.57 0 35 6.7 Yes 5 0.46 No 0 0 No -34 0.59 No 42 45.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47643464 + NM_000251 MSH2 0 . . . 1.48 74.91 34 5.62 Yes 59 1.78 Yes 0 0 No -33 0.66 Yes 10 49.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47639453 + NM_000251 MSH2 0 . . . 5.14 71.03 16 5.47 No 55 -5.28 No 0 0 No -32 0.48 No 46 59.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47763499 + NM_000251 MSH2 0 . . . 1.35 0 16 6.24 Yes 40 1.94 Yes 0 0 No -21 0.61 No 38 83.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23645531 - NM_024675 PALB2 0 . . . 2.34 69.85 42 6.93 Yes 16 0.93 Yes 0 0 No -41 0.75 Yes 42 54.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90967997 - NM_002485 NBN 0 . . . 1.94 73.15 26 5.18 No 48 0.75 No 0 0 No -25 0.47 No 45 51.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131891952 + NM_005732 RAD50 0 . . . 4.86 70.65 15 5.41 No 39 0.79 Yes 0 0 No -35 0.56 No 15 46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89699812 + NM_000314 PTEN 0 . . . 3.52 70.48 45 7.42 Yes 41 0.39 No 0 0 No -34 0.36 No 51 73.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68987335 + NM_133509 RAD51B 0 . . . 8.47 92.36 16 5.91 Yes 6 0.46 No 0 0 No -26 0.6 No 52 59.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68580541 + NM_133509 RAD51B 0 . . . 5.01 80.13 21 5.09 No 44 0.64 No 0 0 No -45 0.42 No 38 63.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41237463 - NM_007294 BRCA1 0 . . . 2.47 74.93 34 5.99 Yes 73 -4.19 No 0 0 No -33 0.72 Yes 48 66.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89726873 + NM_000314 PTEN 0 . . . 5.64 95.2 23 6.92 Yes 24 0.15 No 0 0 No -28 0.48 No 47 59.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94190864 - NM_005591 MRE11 0 . . . 4.67 77.28 23 5.2 No 55 1.09 Yes 0 0 No -22 0.72 Yes 53 55.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68812584 + NM_004360 CDH1 0 . . . 1.66 77 25 5.33 No 38 0.18 No 0 0 No -22 0.84 Yes 15 35.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59820273 - NM_032043 BRIP1 0 . . . 7.68 82.4 17 4.8 No 13 0.92 Yes 0 0 No -24 0.74 Yes 45 88.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6023657 - NM_000535 PMS2 0 . . . 2.5 64.92 28 5.38 No 1 0.61 No 0 0 No -27 0.57 No 41 35.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41239534 - NM_007294 BRCA1 0 . . . 1.5 68.84 21 5.04 No 52 0.63 No 0 0 No -20 0.5 No 48 78.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37038427 + NM_000249 MLH1 0 . . . 3.42 75.73 36 5.57 Yes 3 0.54 No 0 0 No -25 0.64 No 38 72.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47798657 + NM_000251 MSH2 0 . . . 0.64 61.6 11 5.29 No 38 -3.4 No 0 0 No -10 0.35 No 30 18.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108091864 + NM_000051 ATM 0 . . . 6.78 92.33 28 3.92 No 2 0.78 Yes 0 0 No -62 0.55 No 45 61.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90960437 - NM_002485 NBN 0 . . . 1.56 69.49 22 5.83 Yes 75 0.76 No 0 0 No -21 0.95 Yes 12 85.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47733499 + NM_000251 MSH2 0 . . . 5.97 74.39 16 4.96 No 47 -4.62 No 0 0 No -23 0.54 No 44 65.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89621852 + NM_000314 PTEN 0 . . . 4.46 73.21 29 5.91 Yes 57 -3.34 No 0 0 No -28 0.82 Yes 48 54.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37085895 + NM_000249 MLH1 0 . . . 0.05 59.55 20 4.76 No 64 0.32 No 0 0 No -57 0.41 No 46 56.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68503305 + NM_133509 RAD51B 0 . . . 2.54 79.68 21 5.03 No 13 1.24 Yes 0 0 No -20 0.35 No 45 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41240696 - NM_007294 BRCA1 0 . . . 4.81 69.05 17 4.69 No 52 0.42 No 0 0 No -16 0.32 No 21 50.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190676247 + NM_000534 PMS1 0 . . . 0.17 85.91 25 5 No 69 0.84 Yes 0 0 No -28 0.39 No 45 66.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215665099 - NM_000465 BARD1 0 . . . 7.35 84.18 9 6.16 Yes 13 0.95 Yes 0 0 No -16 0.39 No 45 75.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69109228 + NM_133509 RAD51B 0 . . . 7.96 79.62 26 5.45 No 49 1.31 Yes 0 0 No -26 0.5 No 50 56.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68699127 + NM_133509 RAD51B 0 . . . 8.78 85.7 29 5.48 No 65 -6.4 No 0 0 No -28 0.66 No 48 66.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94225588 - NM_005591 MRE11 0 . . . 0.24 69.94 28 5.45 No 46 1.19 Yes 0 0 No -27 0.66 No 55 33.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59850590 - NM_032043 BRIP1 0 . . . 3.41 0 28 5.38 No 52 -1.73 No 0 0 No -27 0.48 No 53 64.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59840878 - NM_032043 BRIP1 0 . . . 3.53 0 34 6.08 Yes 8 1.22 Yes 0 0 No -23 0.69 Yes 50 58.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32897241 + NM_000059 BRCA2 0 . . . 4.63 75.86 30 5.83 Yes 31 1.33 Yes 0 0 No -30 0.57 No 35 71.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108108998 + NM_000051 ATM 0 . . . 0.32 80.09 26 7.21 Yes 19 0.41 No 0 0 No -25 0.55 No 48 88.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37040405 + NM_000249 MLH1 0 . . . 3.81 75.37 14 3.37 No 38 0.05 No 0 0 No -17 0.78 Yes 10 53.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68896127 + NM_133509 RAD51B 0 . . . 7.62 82.12 16 6.21 Yes 20 0.58 No 0 0 No -21 0.72 Yes 38 49.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47683979 + NM_000251 MSH2 0 . . . 0.88 67.26 17 4.07 No -4 0.49 No 0 0 No -22 0.38 No 45 40.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41010610 + NM_001164269 RAD51 0 . . . 2.27 77.69 17 4.47 No 61 0.64 No 0 0 No -31 0.82 Yes 44 58.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69093486 + NM_133509 RAD51B 0 . . . 1.39 70.72 65 6.49 Yes 66 -4.81 No 0 0 No -16 0.5 No 47 53.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37062451 + NM_000249 MLH1 0 . . . 5.89 77.57 23 5.2 No 52 1.23 Yes 0 0 No -28 0.63 No 41 80.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68744401 + NM_133509 RAD51B 0 . . . 4.67 72.49 69 9.48 Yes 8 0.68 No 0 0 No -26 0.49 No 50 47.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52434033 - NM_004656 BAP1 0 . . . 0.6 71.69 24 5.2 No 30 0.65 No 0 0 No -23 0.88 Yes 52 56.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59781957 - NM_032043 BRIP1 0 . . . 5.9 81.85 17 4.8 No 5 0.46 No 0 0 No -16 0.48 No 42 61.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41000177 + NM_001164269 RAD51 0 . . . 2.28 68.34 22 4.69 No 21 2.31 Yes 0 0 No -21 0.97 Yes 37 64.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131953823 + NM_005732 RAD50 0 . . . 2.49 73.19 15 4.58 No 74 0.89 Yes 0 0 No -28 0.43 No 42 56.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68853154 + NM_133509 RAD51B 0 . . . 5.94 81.67 35 5.78 Yes 4 1.23 Yes 0 0 No -28 0.81 Yes 50 65.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105188127 + NM_021930 RINT1 0 . . . 11.25 84.23 38 6.63 Yes 18 0.36 No 0 0 No -23 0.63 No 32 38.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89684989 + NM_000314 PTEN 0 . . . 4.79 79.16 16 4.53 No 36 1.92 Yes 0 0 No -16 0.31 No 47 65.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68809849 + NM_133509 RAD51B 0 . . . 2.93 68.92 63 8.07 Yes 21 0.45 No 0 0 No -22 0.32 No 37 90.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89652084 + NM_000314 PTEN 0 . . . 3.88 75.21 15 4.95 No 76 -2.4 No 0 0 No -53 0.36 No 32 87.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68308251 + NM_133509 RAD51B 0 . . . 11.48 90.01 34 6.4 Yes 23 0.99 Yes 0 0 No -29 0.59 No 35 47.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47711289 + NM_000251 MSH2 0 . . . 5.01 77.54 23 5 No 28 0.88 Yes 0 0 No -22 0.95 Yes 38 57.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1210204 + NM_000455 STK11 0 . . . 1.3 76.58 35 6.67 Yes 9 0.32 No 0 0 No -41 0.41 No 49 91.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89638328 + NM_000314 PTEN 0 . . . 4.9 79.98 49 7.38 Yes 71 -3.94 No 0 0 No -36 0.37 No 47 55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41255457 - NM_007294 BRCA1 0 . . . 3.61 84.17 37 6.24 Yes 57 -1.09 No 0 0 No -36 0.71 Yes 16 67.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68330273 + NM_133509 RAD51B 0 . . . 0.18 0 32 4.02 No 38 1.1 Yes 0 0 No -28 0.43 No 37 68.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108131095 + NM_000051 ATM 0 . . . 3.12 67.56 33 5.99 Yes 26 0.85 Yes 0 0 No -31 0.67 Yes 45 75.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1218887 + NM_000455 STK11 0 . . . 4.09 75.16 32 4.51 No 68 0.14 No 0 0 No -31 0.4 No 35 82.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40988174 + NM_001164269 RAD51 0 . . . 3.03 66.46 38 5.9 Yes 16 1.09 Yes 0 0 No -37 0.54 No 42 89.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47749660 + NM_000251 MSH2 0 . . . 3.58 92.92 21 7.14 Yes 74 1.16 Yes 0 0 No -20 0.94 Yes 30 63.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108155261 + NM_000051 ATM 0 . . . 1.49 67.25 31 5.48 No -3 0.32 No 0 0 No -30 0.66 No 19 44.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108208429 + NM_000051 ATM 0 . . . 6.99 84.07 36 6.64 Yes 40 1.43 Yes 0 0 No -39 0.44 No 47 58.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105180893 + NM_021930 RINT1 0 . . . 4.53 80.12 28 5.37 No 73 0.94 Yes 0 0 No -42 0.58 No 50 66.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68527576 + NM_133509 RAD51B 0 . . . 8.38 73.68 22 5.7 Yes 48 0.23 No 0 0 No -33 0.84 Yes 36 73.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108182042 + NM_000051 ATM 0 . . . 5.72 84.45 32 4.58 No 6 0.08 No 0 0 No -31 0.46 No 44 47.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152364014 - NM_005431 XRCC2 0 . . . 4.42 69.51 18 4.08 No 69 0.73 No 0 0 No -23 0.92 Yes 33 71.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68852399 + NM_004360 CDH1 0 . . . 2.75 74.05 24 6.33 Yes 73 -6.01 No 0 0 No -23 0.65 No 45 90.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94155276 - NM_005591 MRE11 0 . . . 3.53 69 50 7.07 Yes 66 0.79 Yes 0 0 No -35 0.51 No 46 85.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68851972 + NM_133509 RAD51B 0 . . . 3.21 68.39 25 4.19 No 75 1.14 Yes 0 0 No -25 0.45 No 62 26.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29129262 - NM_001005735 CHEK2 0 . . . 7.94 77.28 24 5.82 Yes 56 0.25 No 0 0 No -23 0.54 No 47 63.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68788947 + NM_133509 RAD51B 0 . . . 4.5 75.03 32 7.81 Yes 52 0.64 No 0 0 No -32 0.62 No 41 62.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799744 + NM_058216 RAD51C 0 . . . 6.32 86.48 24 4.25 No 18 0.12 No 0 0 No -24 0.61 No 40 62.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29113462 - NM_001005735 CHEK2 0 . . . 3.72 83.52 24 5.1 No 32 0.66 No 0 0 No -23 0.88 Yes 44 93.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59853382 - NM_032043 BRIP1 0 . . . 1.54 63.48 31 5.84 Yes 45 0.61 No 0 0 No -38 0.39 No 42 55.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68373209 + NM_133509 RAD51B 0 . . . 6.53 97.5 20 4.83 No 63 -1.45 No 0 0 No -34 0.57 No 50 90.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68780686 + NM_133509 RAD51B 0 . . . 1.25 0 15 5.74 Yes 46 -3.75 No 0 0 No -23 0.77 Yes 51 65.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32909973 + NM_000059 BRCA2 0 . . . 3.86 75.17 20 6.37 Yes 68 1.06 Yes 0 0 No -28 0.9 Yes 38 78.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33427295 - NM_002878 RAD51D 0 . . . 7.89 84.3 24 4.49 No 0 0.26 No 0 0 No -26 0.64 No 37 69.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68754660 + NM_133509 RAD51B 0 . . . 4.1 77.43 41 8.43 Yes 10 0.1 No 0 0 No -40 0.94 Yes 45 57.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68761301 + NM_133509 RAD51B 0 . . . 4.77 77.35 18 6.86 Yes 60 0.1 No 0 0 No -34 0.61 No 53 55.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105188686 + NM_021930 RINT1 0 . . . 6.05 71.79 17 6.19 Yes 34 1.64 Yes 0 0 No -41 0.41 No 24 89.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94151242 - NM_005591 MRE11 0 . . . 3.94 75.15 45 6.68 Yes 74 0.65 No 0 0 No -31 0.45 No 45 86.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68760298 + NM_133509 RAD51B 0 . . . 8.15 79.1 26 5.66 Yes 68 0.05 No 0 0 No -25 0.58 No 33 50.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68503489 + NM_133509 RAD51B 0 . . . 1.37 65.85 24 5.48 No 46 0.35 No 0 0 No -24 0.55 No 45 85.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21974315 - NM_000077 CDKN2A 0 . . . 0.18 61.06 21 4.82 No 65 -5.96 No 0 0 No -20 0.48 No 51 31.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32938232 + NM_000059 BRCA2 0 . . . 5.15 72.59 31 5.74 Yes 64 0.75 No 0 0 No -26 0.68 Yes 37 65.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68929100 + NM_133509 RAD51B 0 . . . 3.75 71.15 21 7.17 Yes 20 0.46 No 0 0 No -26 0.45 No 38 82.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59825758 - NM_032043 BRIP1 0 . . . 3.33 69 22 4.48 No 69 0.89 Yes 0 0 No -29 0.69 Yes 48 88.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84407997 - NM_139076 FAM175A 0 . . . 2.68 76.95 31 5.92 Yes -2 0.23 No 0 0 No -30 0.83 Yes 60 29.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41223447 - NM_007294 BRCA1 0 . . . 1.56 63.23 22 6.74 Yes 70 0.73 No 0 0 No -21 0.56 No 45 64.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68398239 + NM_133509 RAD51B 0 . . . 2.3 84.41 22 5.1 No 58 0.48 No 0 0 No -21 0.93 Yes 28 59.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29123931 - NM_001005735 CHEK2 0 . . . 8.07 79.37 16 5.03 No 3 1.06 Yes 0 0 No -20 0.79 Yes 42 72.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190734294 + NM_000534 PMS1 0 . . . 0.81 67.3 40 4.77 No 4 0.1 No 0 0 No -40 0.52 No 54 71.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68943415 + NM_133509 RAD51B 0 . . . 1.71 74.63 48 6.93 Yes 42 0.08 No 0 0 No -32 0.43 No 51 32.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41254051 - NM_007294 BRCA1 0 . . . 3.24 67.17 17 5.08 No 55 0.21 No 0 0 No -22 0.69 Yes 36 92.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59781331 - NM_032043 BRIP1 0 . . . 1.28 61.33 22 4.69 No 64 -5.2 No 0 0 No -25 0.37 No 52 27.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90949155 - NM_002485 NBN 0 . . . 9.6 81.72 84 7.44 Yes 73 1.21 Yes 0 0 No -35 0.32 No 44 85.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68324582 + NM_133509 RAD51B 0 . . . 1.86 0 26 5.79 Yes 58 -3.56 No 25 0.62 Yes -25 0.6 No 29 42.82 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68490932 + NM_133509 RAD51B 0 . . . 5.97 86.48 28 5.58 Yes 9 0.97 Yes 0 0 No -21 0.58 No 49 64.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190666786 + NM_000534 PMS1 0 . . . 9.29 89.88 21 6.06 Yes 45 1.28 Yes 0 0 No -30 0.42 No 44 88.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69001791 + NM_133509 RAD51B 0 . . . 1.33 59.99 13 5.48 No 75 -6.33 No 0 0 No -24 0.53 No 46 40.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68870087 + NM_133509 RAD51B 0 . . . 6.4 92.89 34 7.04 Yes 3 1.46 Yes 0 0 No -27 0.5 No 48 56.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108157300 + NM_000051 ATM 0 . . . 4.08 77.98 21 5.09 No -1 0.28 No 0 0 No -20 0.84 Yes 49 79.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69129130 + NM_133509 RAD51B 0 . . . 1.26 78.43 49 6.46 Yes 3 1.36 Yes 0 0 No -41 0.51 No 44 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68343398 + NM_133509 RAD51B 0 . . . 1.41 78.46 24 5.47 No 15 1.99 Yes 0 0 No -23 0.7 Yes 43 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68799873 + NM_133509 RAD51B 0 . . . 5.16 78.37 41 7.61 Yes 58 1.9 Yes 0 0 No -40 0.65 No 44 89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56769254 + NM_058216 RAD51C 0 . . . 6.49 86.81 25 6.24 Yes 66 0.72 No 0 0 No -24 0.91 Yes 49 83.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6012108 - NM_000535 PMS2 0 . . . 0.72 64.42 17 6.92 Yes 17 0.59 No 0 0 No -27 0.55 No 33 71.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215602501 - NM_000465 BARD1 0 . . . 3.89 82.12 33 7.17 Yes 51 1.23 Yes 0 0 No -32 0.65 No 48 88.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68777545 + NM_133509 RAD51B 0 . . . 0.81 0 28 6.55 Yes 70 -4.64 No 0 0 No -27 0.8 Yes 41 42.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90979176 - NM_002485 NBN 0 . . . 6.52 77.9 47 5.47 No 6 1.79 Yes 0 0 No -31 0.36 No 52 77.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68385136 + NM_133509 RAD51B 0 . . . 2.24 80.12 11 5.74 Yes 7 1.16 Yes 0 0 No -26 0.66 No 51 75.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131922394 + NM_005732 RAD50 0 . . . 3.04 68.18 25 5.48 No 2 0.19 No 0 0 No -24 0.72 Yes 44 73.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1222134 + NM_000455 STK11 0 . . . 0.25 0 27 4.39 No 51 -3.57 No 0 0 No -30 0.39 No 53 12.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68599681 + NM_133509 RAD51B 0 . . . 1.84 0 27 5.43 No 27 -1.38 No 0 0 No -26 0.85 Yes 51 37.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21994425 - NM_000077 CDKN2A 0 . . . 2.44 70.47 22 6.63 Yes 71 -5.24 No 18 0.09 Yes -22 0.81 Yes 53 26.98 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 47704112 + NM_000251 MSH2 0 . . . 0.58 63.67 25 3.76 No 54 1.08 Yes 0 0 No -29 0.51 No 41 49.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6025133 - NM_000535 PMS2 0 . . . 9.71 81.61 18 5.38 No 9 0.52 No 0 0 No -23 0.91 Yes 49 86.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108115834 + NM_000051 ATM 0 . . . 1.38 0 32 6.42 Yes 52 0.26 No 0 0 No -27 0.43 No 47 75.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68810996 + NM_004360 CDH1 0 . . . 1.59 68.32 39 7.09 Yes 74 0.48 No 0 0 No -28 0.56 No 45 81.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7568880 - NM_000546 TP53 0 . . . 3.28 75.55 75 8.65 Yes 69 1.2 Yes 0 0 No -35 0.43 No 45 53.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32944420 + NM_000059 BRCA2 0 . . . 3.87 74.28 19 5 No 3 0.64 No 0 0 No -56 0.48 No 43 81.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68899116 + NM_133509 RAD51B 0 . . . 1.75 0 21 7.9 Yes 1 1.09 Yes 0 0 No -20 0.46 No 26 58.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69011633 + NM_133509 RAD51B 0 . . . 2.36 62.45 26 5.37 No 58 0.93 Yes 0 0 No -25 0.73 Yes 45 52.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41198665 - NM_007294 BRCA1 0 . . . 2.24 0 29 5.79 Yes 39 1.11 Yes 0 0 No -35 0.3 No 45 44.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68826317 + NM_004360 CDH1 0 . . . 3.66 80.12 28 5.83 Yes 7 1.16 Yes 0 0 No -27 0.76 Yes 51 89.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68622027 + NM_133509 RAD51B 0 . . . 4.42 84.22 14 5.39 No 8 1.13 Yes 0 0 No -25 0.88 Yes 50 88.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68660307 + NM_133509 RAD51B 0 . . . 0.52 72.74 30 5.07 No 13 0.08 No 0 0 No -29 0.6 No 45 37.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47702658 + NM_000251 MSH2 0 . . . 4.93 77.63 23 4.9 No 14 0.33 No 0 0 No -22 0.95 Yes 44 97.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52445925 - NM_004656 BAP1 0 . . . 7.26 87.48 19 4.9 No 16 2.43 Yes 0 0 No -18 0.57 No 42 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47666981 + NM_000251 MSH2 0 . . . 2.19 80.65 35 6.41 Yes 25 0.49 No 0 0 No -27 0.66 No 50 58.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68613422 + NM_133509 RAD51B 0 . . . 1.84 81.8 14 5.17 No -4 0.13 No 0 0 No -21 0.79 Yes 48 87.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68864041 + NM_004360 CDH1 0 . . . 4.54 80.12 30 4.17 No 6 0.99 Yes 0 0 No -59 0.37 No 47 78.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68765327 + NM_133509 RAD51B 0 . . . 7.99 84.39 48 6.97 Yes 56 1.51 Yes 0 0 No -33 0.82 Yes 40 77.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68313922 + NM_133509 RAD51B 0 . . . 1.99 0 26 5.62 Yes 34 1.02 Yes 0 0 No -25 0.9 Yes 14 45.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47714568 + NM_000251 MSH2 0 . . . 1.83 76.13 21 7.07 Yes 46 -4.26 No 0 0 No -20 0.85 Yes 47 93.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108211609 + NM_000051 ATM 0 . . . 2.79 65.07 125 8.98 Yes 71 0.84 Yes 0 0 No -39 0.71 Yes 44 84.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68892616 + NM_133509 RAD51B 0 . . . 1.31 70.91 31 7.88 Yes 61 -5.34 No 0 0 No -30 0.57 No 52 81.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32896062 + NM_000059 BRCA2 0 . . . 6.2 81.2 27 5.47 No 4 1.41 Yes 0 0 No -26 0.66 Yes 42 83.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94217843 - NM_005591 MRE11 0 . . . 2.74 79.32 22 7.21 Yes 16 0.06 No 0 0 No -21 0.86 Yes 54 50.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68307133 + NM_133509 RAD51B 0 . . . 6.62 75.77 22 4.9 No -2 0.03 No 0 0 No -21 0.82 Yes 33 68.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29108452 - NM_001005735 CHEK2 0 . . . 6.73 77.81 31 5.64 Yes 68 0.88 Yes 0 0 No -30 0.6 No 42 73.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68318164 + NM_133509 RAD51B 0 . . . 4.58 70.87 34 6.08 Yes 76 -5.73 No 0 0 No -33 0.89 Yes 52 39.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190734808 + NM_000534 PMS1 0 . . . 2.09 74.63 34 7.34 Yes 71 1.43 Yes 0 0 No -24 0.54 No 39 63.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68815848 + NM_004360 CDH1 0 . . . 0.98 70.95 16 4.69 No 41 1.22 Yes 0 0 No -59 0.51 No 30 38.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68576260 + NM_133509 RAD51B 0 . . . 3.89 82.03 20 4.35 No 76 0.22 No 0 0 No -19 0.81 Yes 36 34.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68858194 + NM_133509 RAD51B 0 . . . 1.2 0 19 5 No 24 0.63 No 0 0 No -18 0.8 Yes 46 65.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89645063 + NM_000314 PTEN 0 . . . 5.93 81.56 21 6.18 Yes 34 0.15 No 0 0 No -20 0.89 Yes 46 65.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68452507 + NM_133509 RAD51B 0 . . . 6.33 72.08 17 4.47 No 23 -1.75 No 0 0 No -16 0.54 No 42 59.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68462999 + NM_133509 RAD51B 0 . . . 6.66 83.35 11 4.48 No 11 0.85 Yes 0 0 No -10 0.23 No 47 89.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68830369 + NM_004360 CDH1 0 . . . 0.43 0 26 5.1 No 33 0.31 No 0 0 No -35 0.64 No 25 67.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90948652 - NM_002485 NBN 0 . . . 6 0 28 5.23 No 2 0.3 No 0 0 No -31 0.47 No 49 67.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94174727 - NM_005591 MRE11 0 . . . 4.21 62.08 18 5.26 No 65 0.51 No 0 0 No -21 0.51 No 40 66.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89655441 + NM_000314 PTEN 0 . . . 0.2 70.36 24 3.61 No 0 0.11 No 0 0 No -23 0.46 No 43 76.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59903070 - NM_032043 BRIP1 0 . . . 5.95 0 14 6 Yes 24 1.16 Yes 0 0 No -29 0.83 Yes 42 76.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69056442 + NM_133509 RAD51B 0 . . . 3.05 85.46 16 5.65 Yes 76 0.86 Yes 0 0 No -25 0.6 No 50 87.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152347033 - NM_005431 XRCC2 0 . . . 3.53 68.91 29 5.68 Yes NA NA NA 0 0 No -32 0.36 No 38 56.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68873115 + NM_133509 RAD51B 0 . . . 4.52 70.38 21 5 No 15 -1.43 No 0 0 No -20 0.9 Yes 43 80 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152370130 - NM_005431 XRCC2 0 . . . 2.85 72.7 11 4.12 No 52 -3.3 No 0 0 No -24 0.8 Yes 37 52.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37057070 + NM_000249 MLH1 0 . . . 0.38 56.52 18 7 Yes 51 1.38 Yes 0 0 No -17 0.42 No 50 49.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105195150 + NM_021930 RINT1 0 . . . 1.47 66.56 32 5.95 Yes 23 1.54 Yes 0 0 No -37 0.33 No 40 77.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89701490 + NM_000314 PTEN 0 . . . 0.4 69.76 30 5.54 No 31 -2.74 No 0 0 No -27 0.62 No 60 32.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56785132 + NM_058216 RAD51C 0 . . . 1.18 69.08 45 6.49 Yes 55 0.7 No 0 0 No -36 0.45 No 47 32.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68499545 + NM_133509 RAD51B 0 . . . 11.01 88.89 17 6.08 Yes 52 1.3 Yes 0 0 No -16 0.72 Yes 42 89.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68823488 + NM_004360 CDH1 0 . . . 1.64 67.85 19 3.92 No 58 1.29 Yes 0 0 No -33 0.71 Yes 45 77.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69119287 + NM_133509 RAD51B 0 . . . 4.42 85.91 26 7.42 Yes 3 1.16 Yes 0 0 No -45 0.44 No 51 53.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68787948 + NM_133509 RAD51B 0 . . . 6.43 79.24 12 5.74 Yes 2 0.72 No 0 0 No -26 0.33 No 48 73.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75484603 - NM_001040108 MLH3 0 . . . 2.82 70.85 9 5.1 No 13 0.58 No 0 0 No -22 0.68 Yes 40 58.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68856367 + NM_004360 CDH1 0 . . . 3.59 81.34 21 5.2 No 15 0.23 No 0 0 No -57 0.48 No 53 38.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69008400 + NM_133509 RAD51B 0 . . . 0.03 71.75 42 6.9 Yes 73 0.94 Yes 0 0 No -41 0.46 No 35 89.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131957249 + NM_005732 RAD50 0 . . . 2.77 74.55 20 4.68 No 62 0.71 No 0 0 No -19 0.53 No 37 77.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29115789 - NM_001005735 CHEK2 0 . . . 2.32 70.54 95 8.86 Yes 45 1.41 Yes 0 0 No -39 0.69 Yes 45 45.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69091034 + NM_133509 RAD51B 0 . . . 2.23 81.45 27 7.01 Yes 0 1.08 Yes 0 0 No -26 0.95 Yes 42 45.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7576012 - NM_000546 TP53 0 . . . 5.22 81.97 26 5.28 No 3 2.22 Yes 0 0 No -49 0.51 No 41 74.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75494811 - NM_001040108 MLH3 0 . . . 8.21 85.32 32 5.74 Yes 28 0.35 No 0 0 No -31 0.63 No 50 88.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68779354 + NM_133509 RAD51B 0 . . . 5.82 80.46 21 5.66 Yes 4 0.67 No 0 0 No -20 0.71 Yes 44 76.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68694999 + NM_133509 RAD51B 0 . . . 3.37 71.15 21 4.78 No 7 0.61 No 0 0 No -21 0.57 No 42 61.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89640335 + NM_000314 PTEN 0 . . . 2.36 77.55 18 5.39 No 37 -1.58 No 0 0 No -22 0.64 No 41 59.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105205036 + NM_021930 RINT1 0 . . . 5.38 77.5 22 5.14 No 23 0.85 Yes 0 0 No -24 0.82 Yes 35 54.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68793757 + NM_133509 RAD51B 0 . . . 3.94 76.24 45 8.43 Yes -2 0.23 No 0 0 No -44 0.96 Yes 60 28.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69096228 + NM_133509 RAD51B 0 . . . 4.18 78.96 11 3.84 No 6 1.22 Yes 0 0 No -28 0.81 Yes 51 57.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190713708 + NM_000534 PMS1 0 . . . 3.89 73.25 30 5.57 Yes 21 2.01 Yes 0 0 No -29 0.9 Yes 37 82.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68851859 + NM_133509 RAD51B 0 . . . 0.61 0 26 4.25 No 21 1.19 Yes 0 0 No -53 0.35 No 28 73.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21966886 - NM_000077 CDKN2A 0 . . . 2.45 74.95 33 6 Yes 17 1.6 Yes 0 0 No -32 0.74 Yes 41 81.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37080130 + NM_000249 MLH1 0 . . . 2.45 71.69 22 5.83 Yes 9 1.43 Yes 0 0 No -21 0.7 Yes 49 82.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32917585 + NM_000059 BRCA2 0 . . . 0.28 65.37 27 7.7 Yes 76 0.05 No 0 0 No -35 0.37 No 60 40.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68495622 + NM_133509 RAD51B 0 . . . 6.11 81.04 21 5.66 Yes 67 -3.92 No 0 0 No -20 0.51 No 36 67.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68819351 + NM_133509 RAD51B 0 . . . 2.16 66.8 42 5.96 Yes 71 0.91 Yes 0 0 No -42 0.65 No 37 51.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69024458 + NM_133509 RAD51B 0 . . . 0.49 75.93 18 4.12 No 2 -2.22 No 0 0 No -18 0.46 No 39 61.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90968308 - NM_002485 NBN 0 . . . 3.37 66.17 15 4.58 No 69 0.73 No 0 0 No -44 0.85 Yes 45 53.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1212162 + NM_000455 STK11 0 . . . 9.06 90.81 28 5.83 Yes NA NA NA 0 0 No -27 0.91 Yes 50 70.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59928396 - NM_032043 BRIP1 0 . . . 2.13 75.2 34 5.9 Yes 33 1.02 Yes 0 0 No -33 0.81 Yes 20 59.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94168905 - NM_005591 MRE11 0 . . . 2.48 63.8 42 6.05 Yes 69 0.61 No 0 0 No -41 0.72 Yes 46 77.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56774594 + NM_058216 RAD51C 0 . . . 3.18 61.59 47 6.83 Yes 58 0.04 No 0 0 No -32 0.53 No 36 69.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1212609 + NM_000455 STK11 0 . . . 7.81 88.21 20 5.1 No 43 1.85 Yes 0 0 No -24 0.4 No 15 65.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108095325 + NM_000051 ATM 0 . . . 7.96 78.32 48 7.33 Yes 71 1.49 Yes 0 0 No -30 0.9 Yes 44 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94205394 - NM_005591 MRE11 0 . . . 1.06 63.56 24 6.16 Yes 67 -3.42 No 0 0 No -24 0.76 Yes 41 61.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108179365 + NM_000051 ATM 0 . . . 2.95 71.84 16 5.74 Yes 52 -4.33 No 0 0 No -26 0.53 No 51 54.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59806859 - NM_032043 BRIP1 0 . . . 6.41 82.86 18 4.8 No 51 1.6 Yes 0 0 No -25 0.57 No 41 96.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37083079 + NM_000249 MLH1 0 . . . 3.32 66.98 17 5.38 No 9 0.64 No 0 0 No -25 0.9 Yes 49 66.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41009095 + NM_001164269 RAD51 0 . . . 8.89 87.6 24 5.28 No 59 1.19 Yes 0 0 No -23 0.87 Yes 40 69.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108128742 + NM_000051 ATM 0 . . . 1.73 83.16 15 4.47 No 33 0.85 Yes 0 0 No -55 0.36 No 50 88.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131934094 + NM_005732 RAD50 0 . . . 8.1 86.31 24 5.29 No 7 0.51 No 0 0 No -21 0.52 No 44 58.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56795402 + NM_058216 RAD51C 0 . . . 5.07 87.32 26 5.29 No 15 -0.21 No 0 0 No -26 0.42 No 43 76.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47665928 + NM_000251 MSH2 0 . . . 0.43 0 15 5.74 Yes 34 0.39 No 0 0 No -50 0.52 No 52 47.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75498167 - NM_001040108 MLH3 0 . . . 5.76 89.49 21 4.79 No 5 1.08 Yes 0 0 No -46 0.83 Yes 43 68.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68933888 + NM_133509 RAD51B 0 . . . 1.2 68.98 17 4.68 No 71 0.82 Yes 0 0 No -20 0.6 No 45 81.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68638605 + NM_133509 RAD51B 0 . . . 3.6 85.02 25 5 No 4 1.39 Yes 0 0 No -24 0.95 Yes 44 65.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108191613 + NM_000051 ATM 0 . . . 1.05 69.3 34 5.62 Yes 6 1.04 Yes 0 0 No -33 0.64 No 52 80.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32911124 + NM_000059 BRCA2 0 . . . 0.84 73.81 24 3.62 No 1 0.11 No 0 0 No -23 0.67 Yes 44 63.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33438231 - NM_002878 RAD51D 0 . . . 3.92 80.12 27 5.48 No 9 1.83 Yes 0 0 No -29 0.63 No 49 92.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94193315 - NM_005591 MRE11 0 . . . 8.19 87.31 33 7.51 Yes -1 1.29 Yes 0 0 No -32 0.6 No 40 75.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68474145 + NM_133509 RAD51B 0 . . . 2.84 79.18 37 7.28 Yes 49 1.17 Yes 0 0 No -36 0.57 No 44 51.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68854544 + NM_133509 RAD51B 0 . . . 1.43 65.98 31 8.84 Yes 58 0.57 No 0 0 No -35 0.43 No 49 63.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69142191 + NM_133509 RAD51B 0 . . . 3.18 67.18 14 4.43 No 12 1.45 Yes 0 0 No -26 0.75 Yes 46 82.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68551561 + NM_133509 RAD51B 0 . . . 6.55 78.08 25 4.37 No 23 0.7 No 0 0 No -24 0.8 Yes 35 90.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68309900 + NM_133509 RAD51B 0 . . . 3.86 0 58 7.52 Yes 48 1.98 Yes 0 0 No -29 0.89 Yes 10 56.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131965836 + NM_005732 RAD50 0 . . . 1.1 66.46 29 5.91 Yes 16 1.4 Yes 0 0 No -28 0.75 Yes 42 92.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37055293 + NM_000249 MLH1 0 . . . 3.12 70.69 30 4.47 No 73 -3.24 No 0 0 No -25 0.3 No 45 63.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47767153 + NM_000251 MSH2 0 . . . 2.52 76.69 58 7.73 Yes 43 0.91 Yes 0 0 No -42 0.43 No 46 72.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47777785 + NM_000251 MSH2 0 . . . 3.13 68.34 24 6.54 Yes 23 1.55 Yes 0 0 No -23 0.72 Yes 45 83.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23628643 - NM_024675 PALB2 0 . . . 4.8 0 34 6.28 Yes 26 0.89 Yes 0 0 No -33 0.61 No 32 64.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68612639 + NM_133509 RAD51B 0 . . . 8.28 80.2 21 5.02 No 58 -3.1 No 0 0 No -45 0.55 No 42 75.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94187054 - NM_005591 MRE11 0 . . . 1.12 61.6 20 4.9 No 61 0.52 No 0 0 No -48 0.58 No 37 53.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69001701 + NM_133509 RAD51B 0 . . . 9.43 78.22 28 4.94 No 47 0.53 No 0 0 No -23 0.36 No 40 38.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68839517 + NM_004360 CDH1 0 . . . 3.9 83.04 17 4.8 No 56 0.88 Yes 0 0 No -16 0.38 No 24 60.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131941896 + NM_005732 RAD50 0 . . . 2.09 72.65 21 5.43 No 14 0.08 No 0 0 No -20 0.49 No 49 47.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68820355 + NM_133509 RAD51B 0 . . . 0.92 66.94 23 5.83 Yes 68 -4.58 No 0 0 No -22 0.89 Yes 47 53.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131927241 + NM_005732 RAD50 0 . . . 2.04 69.49 15 5.39 No 32 0.81 Yes 0 0 No -22 0.74 Yes 44 50.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108145969 + NM_000051 ATM 0 . . . 0.51 76.69 33 5.43 No 15 0.74 No 0 0 No -29 0.53 No 46 45.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69101637 + NM_133509 RAD51B 0 . . . 6.19 68.92 34 7.67 Yes 15 1.17 Yes 0 0 No -33 0.64 No 43 72.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68973722 + NM_133509 RAD51B 0 . . . 8.63 93.84 33 5.82 Yes 30 0.3 No 0 0 No -32 0.43 No 46 56.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69058755 + NM_133509 RAD51B 0 . . . 6.81 75.77 26 6.49 Yes 9 1.38 Yes 0 0 No -25 0.93 Yes 49 96.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48006432 + NM_000179 MSH6 0 . . . 0.18 76.03 14 5.03 No 12 0.21 No 0 0 No -21 0.66 Yes 46 94.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59814229 - NM_032043 BRIP1 0 . . . 4.63 82.94 18 4.84 No -4 0.45 No 0 0 No -17 0.71 Yes 48 69.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59832661 - NM_032043 BRIP1 0 . . . 0.89 80.49 31 5.44 No 27 0.68 No 0 0 No -39 0.69 Yes 47 61.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68785025 + NM_004360 CDH1 0 . . . 6.08 80.81 29 5.45 No 74 1.02 Yes 0 0 No -24 0.67 Yes 44 54.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190667541 + NM_000534 PMS1 0 . . . 6.68 84.32 26 5.95 Yes 32 2.03 Yes 0 0 No -25 0.72 Yes 44 58.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68819659 + NM_004360 CDH1 0 . . . 9.28 91.35 9 3.87 No 45 1.15 Yes 0 0 No -30 0.85 Yes 50 48.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131912092 + NM_005732 RAD50 0 . . . 2.67 75.88 33 5.77 Yes 24 0.4 No 0 0 No -27 0.54 No 38 56.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32904674 + NM_000059 BRCA2 0 . . . 1.44 63.24 40 6.52 Yes 36 -3.96 No 0 0 No -39 0.78 Yes 43 35.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68577764 + NM_133509 RAD51B 0 . . . 4.01 82.18 16 4.88 No 62 0.39 No 0 0 No -50 0.53 No 42 90.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68791717 + NM_133509 RAD51B 0 . . . 2.03 70.13 25 5.55 No 12 1.46 Yes 0 0 No -24 0.51 No 46 95.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68380130 + NM_133509 RAD51B 0 . . . 6.29 77.82 17 6.39 Yes 52 -3.98 No 0 0 No -16 0.77 Yes 33 67.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47662843 + NM_000251 MSH2 0 . . . 5.9 83.82 27 5.38 No 7 1.29 Yes 0 0 No -26 0.73 Yes 51 89.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32974889 + NM_000059 BRCA2 0 . . . 5.12 87.02 22 3.68 No 10 0.32 No 0 0 No -22 0.38 No 42 64.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89679168 + NM_000314 PTEN 0 . . . 2.88 80.73 19 4.53 No 3 1.16 Yes 0 0 No -18 0.64 No 49 56.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68325134 + NM_133509 RAD51B 0 . . . 0.1 0 14 5.37 No 18 0.77 Yes 0 0 No -27 0.5 No 40 77.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190710501 + NM_000534 PMS1 0 . . . 5.13 87.77 50 5.05 No 36 1.13 Yes 0 0 No -19 0.53 No 22 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89649357 + NM_000314 PTEN 0 . . . 1.97 71.03 29 5.82 Yes -4 0.16 No 0 0 No -28 0.87 Yes 50 49.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68645295 + NM_133509 RAD51B 0 . . . 3.98 78.32 25 5 No 8 0.6 No 0 0 No -24 0.88 Yes 38 92.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68348409 + NM_133509 RAD51B 0 . . . 9.48 85.36 27 6.61 Yes 14 1.04 Yes 0 0 No -26 0.42 No 44 95.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190725003 + NM_000534 PMS1 0 . . . 1.73 77.58 28 7.44 Yes 46 1.23 Yes 0 0 No -27 0.78 Yes 41 41.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23642914 - NM_024675 PALB2 0 . . . 5.75 74.95 27 5.1 No 3 1.02 Yes 0 0 No -26 0.71 Yes 55 43.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68783471 + NM_133509 RAD51B 0 . . . 6.05 78.82 32 7.98 Yes 67 1.04 Yes 0 0 No -31 0.47 No 44 68.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75509384 - NM_001040108 MLH3 0 . . . 3.77 66.74 61 7.72 Yes 25 1.08 Yes 0 0 No -30 0.46 No 37 54.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29107509 - NM_001005735 CHEK2 0 . . . 2.79 0 14 3.76 No 36 1.65 Yes 0 0 No -28 0.54 No 39 89.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69120349 + NM_133509 RAD51B 0 . . . 1.3 67.67 23 5.05 No 8 -0.64 No 0 0 No -22 0.77 Yes 50 79.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32908934 + NM_000059 BRCA2 0 . . . 6.79 70.72 16 5.48 No 33 0.54 No 0 0 No -26 0.36 No 46 81.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68674732 + NM_133509 RAD51B 0 . . . 2.51 68.16 25 5.33 No 42 0.83 Yes 0 0 No -24 0.72 Yes 45 83.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68303997 + NM_133509 RAD51B 0 . . . 2.39 71.29 23 3.36 No 10 0.81 Yes 0 0 No -52 0.89 Yes 48 44.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89693965 + NM_000314 PTEN 0 . . . 3.13 77.07 27 5.39 No 70 0.67 No 0 0 No -22 0.52 No 38 72.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68412740 + NM_133509 RAD51B 0 . . . 8.98 79.73 32 5.8 Yes 5 0.89 Yes 0 0 No -18 0.75 Yes 46 65.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7566733 - NM_000546 TP53 0 . . . 2.9 77.67 17 4.45 No 32 0.15 No 0 0 No -26 0.83 Yes 44 87.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108201513 + NM_000051 ATM 0 . . . 0.8 80.2 29 3.72 No 62 -4.47 No 0 0 No -28 0.74 Yes 47 57.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89677042 + NM_000314 PTEN 0 . . . 4.81 77.92 20 5.1 No 16 0.3 No 0 0 No -59 0.43 No 42 68.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48028481 + NM_000179 MSH6 0 . . . 4.5 83.19 22 5.74 Yes 68 0.14 No 0 0 No -21 0.97 Yes 43 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89661714 + NM_000314 PTEN 0 . . . 4.8 83.53 29 5.84 Yes 41 0.6 No 0 0 No -21 0.4 No 48 82.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215672414 - NM_000465 BARD1 0 . . . 2.1 85.71 33 5.74 Yes 12 1.04 Yes 0 0 No -32 0.77 Yes 46 93.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94219795 - NM_005591 MRE11 0 . . . 5.38 67.54 23 5.18 No 42 1.05 Yes 0 0 No -20 0.48 No 47 72.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108238039 + NM_000051 ATM 0 . . . 3.78 80.78 23 6.65 Yes 12 1.1 Yes 0 0 No -22 0.81 Yes 46 88.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69030237 + NM_133509 RAD51B 0 . . . 1.58 72.46 16 5.89 Yes 65 -3.08 No 26 0.21 Yes -30 0.38 No 41 20.43 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 69000938 + NM_133509 RAD51B 0 . . . 4.01 74.81 9 5.39 No 72 -5.83 No 0 0 No -25 0.38 No 52 53.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7583055 - NM_000546 TP53 0 . . . 0.34 0 25 4.49 No 10 0.96 Yes 0 0 No -24 0.89 Yes 48 88.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47684389 + NM_000251 MSH2 0 . . . 3.58 70.6 33 6.47 Yes 35 1.69 Yes 0 0 No -32 0.63 No 51 34.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59927270 - NM_032043 BRIP1 0 . . . 1 69.61 30 5.52 No 55 -3.11 No 0 0 No -30 0.82 Yes 37 38.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108224903 + NM_000051 ATM 0 . . . 2.46 71.59 13 4.36 No 53 -3.73 No 0 0 No -17 0.62 No 58 45.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68549473 + NM_133509 RAD51B 0 . . . 4.4 80.14 13 6.16 Yes 37 0.36 No 0 0 No -31 0.62 No 43 73.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89729186 + NM_000314 PTEN 0 . . . 1.22 78.97 38 6.62 Yes 67 -3.83 No 0 0 No -35 0.43 No 49 87.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94193207 - NM_005591 MRE11 0 . . . 7.25 92.58 30 7.06 Yes 19 2.11 Yes 0 0 No -29 0.87 Yes 39 39.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33432096 - NM_002878 RAD51D 0 . . . 8.86 90.95 27 6.26 Yes 44 1.09 Yes 0 0 No -30 0.32 No 56 40.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68843943 + NM_004360 CDH1 0 . . . 1.78 71.51 29 7.04 Yes 45 0.52 No 0 0 No -28 0.93 Yes 47 92.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23618421 - NM_024675 PALB2 0 . . . 3.35 85.22 18 5.74 Yes 45 0.08 No 0 0 No -17 0.4 No 48 61.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190715617 + NM_000534 PMS1 0 . . . 1.82 61.57 14 4.74 No 40 -2.66 No 0 0 No -24 0.3 No 58 51.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68755010 + NM_133509 RAD51B 0 . . . 4.32 75.05 21 4.22 No 13 0.37 No 0 0 No -18 0.66 No 45 81.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23640419 - NM_024675 PALB2 0 . . . 2.89 69.93 23 4.58 No 43 -2.73 No 0 0 No -22 0.77 Yes 42 79.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68776998 + NM_133509 RAD51B 0 . . . 5.71 81.69 15 5.57 Yes 54 0.42 No 0 0 No -21 0.52 No 47 52.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69102656 + NM_133509 RAD51B 0 . . . 11.77 92.03 35 4.88 No 40 0.8 Yes 0 0 No -26 0.83 Yes 36 71.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84387516 - NM_139076 FAM175A 0 . . . 6.05 75.49 29 6.04 Yes 55 0.45 No 0 0 No -28 0.89 Yes 44 53.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68559437 + NM_133509 RAD51B 0 . . . 4.99 76.22 28 6.5 Yes 34 1.32 Yes 0 0 No -27 0.75 Yes 24 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69091255 + NM_133509 RAD51B 0 . . . 5.62 75.54 18 4.83 No 14 0.3 No 0 0 No -17 0.48 No 44 73.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108102047 + NM_000051 ATM 0 . . . 0.3 56.46 37 5.24 No 59 0.28 No 0 0 No -36 0.87 Yes 40 27.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108122288 + NM_000051 ATM 0 . . . 0.72 67.2 17 5.19 No 59 1.39 Yes 0 0 No -20 0.73 Yes 38 84.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90971147 - NM_002485 NBN 0 . . . 1.77 64.32 18 5.12 No -1 0.49 No 0 0 No -28 0.56 No 46 53.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21989062 - NM_000077 CDKN2A 0 . . . 1.96 73.95 33 6.36 Yes 4 0.31 No 0 0 No -32 0.76 Yes 23 83.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41263453 - NM_007294 BRCA1 0 . . . 1.88 68.95 21 5.92 Yes 59 1.41 Yes 0 0 No -20 0.85 Yes 42 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68721370 + NM_133509 RAD51B 0 . . . 2.3 64.14 20 3.92 No 55 0.62 No 0 0 No -29 0.5 No 47 68.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68924810 + NM_133509 RAD51B 0 . . . 2.13 63.55 20 4.67 No 25 1.01 Yes 0 0 No -19 0.57 No 33 80.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47649395 + NM_000251 MSH2 0 . . . 4 71.05 22 6.16 Yes 62 0.7 No 0 0 No -26 0.49 No 49 78.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6011013 - NM_000535 PMS2 0 . . . 0.37 77.95 22 5.29 No 16 -2.28 No 0 0 No -26 0.61 No 63 30.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59880852 - NM_032043 BRIP1 0 . . . 5.09 80.34 36 8.48 Yes 64 1.55 Yes 0 0 No -35 0.73 Yes 46 29.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41236622 - NM_007294 BRCA1 0 . . . 0.29 75.74 18 4.9 No 51 -3.22 No 0 0 No -44 0.35 No 46 35.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37084412 + NM_000249 MLH1 0 . . . 0.1 66.57 32 4.36 No 43 -3.74 No 0 0 No -31 0.55 No 50 28.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68894973 + NM_133509 RAD51B 0 . . . 2.21 67.85 13 4.36 No 56 -4.9 No 0 0 No -37 0.74 Yes 53 65.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68780256 + NM_133509 RAD51B 0 . . . 3.12 67.74 27 5.06 No 38 0.39 No 0 0 No -22 0.72 Yes 42 60.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32927299 + NM_000059 BRCA2 0 . . . 1.43 70.28 16 4.31 No 15 1.09 Yes 0 0 No -20 0.51 No 43 89.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75494230 - NM_001040108 MLH3 0 . . . 0.32 74.68 48 5.91 Yes 4 0.1 No 0 0 No -47 0.54 No 54 88.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7587958 - NM_000546 TP53 0 . . . 10.69 87.68 20 4.76 No 2 0.62 No 0 0 No -19 0.69 Yes 40 66.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84382870 - NM_139076 FAM175A 0 . . . 2.28 73.27 19 4.9 No 34 -3.55 No 0 0 No -26 0.77 Yes 50 78.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69079459 + NM_133509 RAD51B 0 . . . 3.1 67.54 13 5.1 No 64 -5.44 No 0 0 No -35 0.3 No 40 48.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108164908 + NM_000051 ATM 0 . . . 3.47 69.14 13 5.16 No 1 0.59 No 0 0 No -29 0.67 Yes 45 73.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37066462 + NM_000249 MLH1 0 . . . 0.24 59.44 24 5.1 No 60 0.49 No 0 0 No -23 0.9 Yes 30 92.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6032804 - NM_000535 PMS2 0 . . . 0.66 0 33 5.73 Yes 38 1.13 Yes 0 0 No -32 0.51 No 51 30.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41248975 - NM_007294 BRCA1 0 . . . 2.5 0 22 4.8 No 45 1.32 Yes 0 0 No -21 0.97 Yes 43 34.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37085274 + NM_000249 MLH1 0 . . . 0.69 83.77 17 5.6 Yes 3 0.77 No 0 0 No -28 0.73 Yes 50 63.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108113698 + NM_000051 ATM 0 . . . 1.58 64.18 25 4.9 No 52 1.18 Yes 0 0 No -20 0.79 Yes 54 73.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32910605 + NM_000059 BRCA2 0 . . . 4.4 85.31 25 5.52 No 69 -3 No 0 0 No -25 0.28 No 52 77.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68744578 + NM_133509 RAD51B 0 . . . 4.09 77.8 27 5.74 Yes 37 1.12 Yes 0 0 No -26 0.92 Yes 46 56.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68804719 + NM_133509 RAD51B 0 . . . 2.22 81.35 26 5.56 Yes 58 1.2 Yes 0 0 No -31 0.39 No 12 45.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108204765 + NM_000051 ATM 0 . . . 0.33 60.79 20 4.57 No 44 1.38 Yes 0 0 No -22 0.72 Yes 14 58.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68296142 + NM_133509 RAD51B 0 . . . 3.41 85.02 22 5.29 No 72 1.17 Yes 0 0 No -26 0.64 No 53 83.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89723363 + NM_000314 PTEN 0 . . . 1.77 0 17 5.29 No 62 0.04 No 0 0 No -21 0.46 No 47 37.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68932538 + NM_133509 RAD51B 0 . . . 2.02 65.65 14 5.1 No 56 1.2 Yes 0 0 No -25 0.32 No 42 61.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29136368 - NM_001005735 CHEK2 0 . . . 1.55 75.65 31 6.05 Yes -2 0.03 No 0 0 No -24 0.41 No 45 36.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94159203 - NM_005591 MRE11 0 . . . 6.37 79.91 21 5.57 Yes 25 0.6 No 0 0 No -18 0.52 No 45 87.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68491063 + NM_133509 RAD51B 0 . . . 4.73 70.5 36 7.71 Yes 62 1.57 Yes 0 0 No -42 0.51 No 50 61.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108113235 + NM_000051 ATM 0 . . . 8 78.2 34 6.46 Yes 4 1.19 Yes 0 0 No -28 0.54 No 54 54.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68786387 + NM_133509 RAD51B 0 . . . 6.93 87.33 42 6.99 Yes 11 0 No 0 0 No -40 0.42 No 47 86.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94194559 - NM_005591 MRE11 0 . . . 4.13 82.96 32 5.74 Yes 7 0.67 No 0 0 No -28 0.39 No 48 70.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59839298 - NM_032043 BRIP1 0 . . . 1.92 65.1 29 5.52 No 38 1.49 Yes 0 0 No -28 0.67 Yes 20 81.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190680036 + NM_000534 PMS1 0 . . . 8.07 84.72 28 5.74 Yes 16 0.97 Yes 0 0 No -27 0.9 Yes 48 56.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68950757 + NM_133509 RAD51B 0 . . . 3.75 79.71 13 5 No -3 0.45 No 0 0 No -24 0.53 No 46 56.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694258 + NM_000534 PMS1 0 . . . 3.08 67.87 14 4.81 No 45 0.46 No 0 0 No -21 0.43 No 36 53.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68774903 + NM_133509 RAD51B 0 . . . 5.1 86.92 16 4.69 No 19 0.84 Yes 0 0 No -23 0.35 No 45 74.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41221541 - NM_007294 BRCA1 0 . . . 1.3 59.93 16 4.69 No 63 1.28 Yes 0 0 No -15 0.52 No 50 65.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190670480 + NM_000534 PMS1 0 . . . 4.47 71.87 25 5.57 Yes 12 0.12 No 0 0 No -24 0.78 Yes 46 86.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69099074 + NM_133509 RAD51B 0 . . . 0.9 72.16 40 8.68 Yes 73 1.95 Yes 0 0 No -35 0.7 Yes 62 39.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190681530 + NM_000534 PMS1 0 . . . 4.22 81.61 73 8.6 Yes 54 0.74 No 0 0 No -35 0.6 No 49 37.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68481444 + NM_133509 RAD51B 0 . . . 1.77 62.03 15 4.63 No 50 1.23 Yes 0 0 No -24 0.66 Yes 42 22.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131955459 + NM_005732 RAD50 0 . . . 6.32 75.59 18 6.92 Yes 74 0.08 No 0 0 No -17 0.7 Yes 47 79.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105189529 + NM_021930 RINT1 0 . . . 5.99 86.2 34 7.62 Yes 9 1.31 Yes 0 0 No -33 0.7 Yes 49 93.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68456105 + NM_133509 RAD51B 0 . . . 0.32 74.68 21 5.2 No 47 1.31 Yes 0 0 No -20 0.54 No 54 77.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68490568 + NM_133509 RAD51B 0 . . . 4.75 81.46 20 4.95 No 29 0.75 No 0 0 No -20 0.44 No 46 53.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94201518 - NM_005591 MRE11 0 . . . 7.83 89.59 37 5.95 Yes 3 0.68 No 0 0 No -21 0.76 Yes 45 84.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68806499 + NM_004360 CDH1 0 . . . 4.83 71.9 9 4.58 No 42 0.57 No 0 0 No -28 0.4 No 38 75.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47749270 + NM_000251 MSH2 0 . . . 1.36 80.8 31 5.99 Yes 64 -4.6 No 0 0 No -30 0.84 Yes 58 12.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137103 + NM_133509 RAD51B 0 . . . 1.12 0 19 4.77 No 55 -2.24 No 0 0 No -22 0.9 Yes 37 64.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59861049 - NM_032043 BRIP1 0 . . . 9.62 89.27 28 5.57 Yes 10 1.12 Yes 0 0 No -27 0.88 Yes 48 65.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47632822 + NM_000251 MSH2 0 . . . 6.36 75.53 22 5.29 No 9 0.81 Yes 0 0 No -21 0.79 Yes 45 92.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47634478 + NM_000251 MSH2 0 . . . 1.48 80.96 28 6.63 Yes 18 -2.29 No 0 0 No -27 0.72 Yes 48 53.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68944681 + NM_133509 RAD51B 0 . . . 2.65 82.67 45 9.06 Yes 18 0.5 No 0 0 No -31 0.62 No 50 86.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68703212 + NM_133509 RAD51B 0 . . . 0.31 81.72 27 5.04 No 46 0.59 No 0 0 No -26 0.57 No 50 89.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75513039 - NM_001040108 MLH3 0 . . . 0.83 0 32 5.56 Yes 70 -3.8 No 0 0 No -24 0.45 No 47 70.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68912011 + NM_133509 RAD51B 0 . . . 9.8 93.02 28 4.75 No 5 0.6 No 0 0 No -27 0.57 No 52 70.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59771543 - NM_032043 BRIP1 0 . . . 4.15 67.35 30 5.56 Yes 71 -1.98 No 0 0 No -29 0.69 Yes 29 48.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89640492 + NM_000314 PTEN 0 . . . 2.82 72.08 18 5.72 Yes 31 0.24 No 0 0 No -28 0.39 No 39 38.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32908515 + NM_000059 BRCA2 0 . . . 5.82 81.44 29 5.28 No 8 0.37 No 0 0 No -28 0.75 Yes 50 64.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56775254 + NM_058216 RAD51C 0 . . . 4.48 85.02 43 5.86 Yes 3 0.44 No 0 0 No -38 0.86 Yes 44 41.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90981803 - NM_002485 NBN 0 . . . 6.1 84.23 21 6.19 Yes 67 0.02 No 0 0 No -20 0.75 Yes 48 41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104179097 - NM_001100119 XRCC3 0 . . . 6.69 76.17 22 5.72 Yes 39 -0.73 No 0 0 No -22 0.53 No 48 64.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108103287 + NM_000051 ATM 0 . . . 2.3 84.41 43 4.63 No 31 1.65 Yes 0 0 No -19 0.57 No 27 79.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47672023 + NM_000251 MSH2 0 . . . 3.1 72.33 14 4.92 No 19 1.64 Yes 0 0 No -18 0.61 No 39 92.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68966355 + NM_133509 RAD51B 0 . . . 4.54 77.85 45 4.61 No -2 0.35 No 0 0 No -33 0.69 Yes 44 34.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190674060 + NM_000534 PMS1 0 . . . 8.27 83.05 23 4.9 No 4 0.06 No 0 0 No -22 0.46 No 48 57.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68757367 + NM_133509 RAD51B 0 . . . 1.49 69.64 30 4.71 No 48 0.87 Yes 0 0 No -22 0.66 No 33 76.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69047302 + NM_133509 RAD51B 0 . . . 6.03 77.18 15 5.39 No 74 -2.07 No 0 0 No -48 0.42 No 32 68.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68635485 + NM_133509 RAD51B 0 . . . 7.19 76.2 26 5.29 No 16 1.37 Yes 0 0 No -25 0.73 Yes 37 68.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69112559 + NM_133509 RAD51B 0 . . . 0.2 71.37 11 5 No 75 -1.44 No 0 0 No -43 0.54 No 34 77.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68734754 + NM_133509 RAD51B 0 . . . 5.18 79.17 32 5.23 No 10 0.87 Yes 0 0 No -26 0.84 Yes 48 86.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131919504 + NM_005732 RAD50 0 . . . 0.64 84.22 18 5.66 Yes 33 1.13 Yes 0 0 No -25 0.5 No 50 34.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32962633 + NM_000059 BRCA2 0 . . . 10.08 91.9 25 5.03 No 12 0.26 No 0 0 No -24 0.63 No 46 90.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37086654 + NM_000249 MLH1 0 . . . 2.69 73.86 17 4.58 No 58 0.92 Yes 0 0 No -16 0.43 No 55 34.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108091830 + NM_000051 ATM 0 . . . 4.43 83.29 26 6.56 Yes 3 0.57 No 0 0 No -25 0.77 Yes 43 48.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32946913 + NM_000059 BRCA2 0 . . . 2.17 78.48 25 3.83 No 29 0.65 No 0 0 No -30 0.3 No 40 29.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68789563 + NM_004360 CDH1 0 . . . 3.47 81.88 15 5.74 Yes 65 1.54 Yes 0 0 No -28 0.31 No 10 50.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21982056 - NM_000077 CDKN2A 0 . . . 2.75 79.45 24 5.34 No 8 0.64 No 0 0 No -23 0.5 No 50 85.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59819240 - NM_032043 BRIP1 0 . . . 3.28 68.33 21 5.04 No 8 1.91 Yes 0 0 No -20 0.65 No 50 76.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23628988 - NM_024675 PALB2 0 . . . 3.56 87.92 17 5.56 Yes 9 1.08 Yes 0 0 No -27 0.82 Yes 49 95.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6048815 - NM_000535 PMS2 0 . . . 0.29 79.66 18 4.87 No 75 -3.6 No 0 0 No -21 0.45 No 50 81.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215642677 - NM_000465 BARD1 0 . . . 2.37 68.34 17 5.29 No 20 0.93 Yes 0 0 No -25 0.43 No 43 82.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47757965 + NM_000251 MSH2 0 . . . 3.83 82.73 36 6.24 Yes 56 0.64 No 0 0 No -21 0.34 No 46 88.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131943320 + NM_005732 RAD50 0 . . . 3 72.96 34 5.74 Yes 8 0.35 No 0 0 No -23 0.42 No 41 69.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896520 - NM_032043 BRIP1 0 . . . 4.15 84.79 16 4.69 No 2 1.52 Yes 0 0 No -31 0.3 No 44 62.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41007753 + NM_001164269 RAD51 0 . . . 1.56 72.89 15 4.58 No 74 -6.29 No 0 0 No -32 0.81 Yes 36 49.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68916533 + NM_133509 RAD51B 0 . . . 8.23 82.38 13 4.85 No 26 0.88 Yes 0 0 No -51 0.27 No 32 43.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29134001 - NM_001005735 CHEK2 0 . . . 1.32 74.05 27 5.2 No 34 1.43 Yes 0 0 No -26 0.66 No 24 80.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29135670 - NM_001005735 CHEK2 0 . . . 1.51 0 28 5.38 No 26 0.59 No 0 0 No -42 0.48 No 32 98.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68668449 + NM_133509 RAD51B 0 . . . 3.35 71.73 21 8.1 Yes 33 -4.03 No 0 0 No -25 0.42 No 53 65.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68842161 + NM_133509 RAD51B 0 . . . 6.05 81.58 31 5.61 Yes 12 1.13 Yes 0 0 No -25 0.48 No 46 86.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41265650 - NM_007294 BRCA1 0 . . . 0.51 70.69 20 5 No 4 0.4 No 0 0 No -59 0.64 No 54 57.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69110471 + NM_133509 RAD51B 0 . . . 11.8 87.16 17 4.78 No 37 0.03 No 0 0 No -25 0.32 No 44 80.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68771869 + NM_133509 RAD51B 0 . . . 1.75 65.02 57 7.74 Yes 12 0.95 Yes 0 0 No -23 0.84 Yes 40 90.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41263034 - NM_007294 BRCA1 0 . . . 5.07 74.86 18 5.38 No 16 1.19 Yes 0 0 No -22 0.49 No 42 93.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6038886 - NM_000535 PMS2 0 . . . 1.38 69.34 20 5.08 No 42 0.51 No 0 0 No -19 0.53 No 16 85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131915321 + NM_005732 RAD50 0 . . . 3.22 83.12 17 5.83 Yes 72 0.62 No 0 0 No -35 0.51 No 47 92.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59843557 - NM_032043 BRIP1 0 . . . 0.32 62.03 24 4.32 No 65 -4.91 No 0 0 No -23 0.47 No 51 78.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69041239 + NM_133509 RAD51B 0 . . . 1.03 69.36 32 5.74 Yes 17 0.62 No 0 0 No -31 0.69 Yes 41 64.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23649967 - NM_024675 PALB2 0 . . . 3.16 68.44 21 3.54 No 53 0.91 Yes 0 0 No -20 0.84 Yes 28 60.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68773867 + NM_133509 RAD51B 0 . . . 1.62 71.37 24 3.8 No 66 0.01 No 0 0 No -26 0.82 Yes 50 64.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69148877 + NM_133509 RAD51B 0 . . . 0.31 71.7 40 6.17 Yes 48 1.18 Yes 0 0 No -26 0.66 Yes 61 34.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56804276 + NM_058216 RAD51C 0 . . . 3.87 88.29 27 6.18 Yes 9 1.04 Yes 0 0 No -26 0.8 Yes 49 95.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131976160 + NM_005732 RAD50 0 . . . 4.87 63.13 26 5.4 No 52 1.1 Yes 0 0 No -22 0.31 No 43 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32930460 + NM_000059 BRCA2 0 . . . 0.83 80.37 22 5.91 Yes 21 0.47 No 0 0 No -21 0.74 Yes 50 78.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59871283 - NM_032043 BRIP1 0 . . . 4.51 0 17 4.75 No 8 0.47 No 0 0 No -24 0.81 Yes 50 59.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131971512 + NM_005732 RAD50 0 . . . 9.27 92 17 5.1 No 17 1.62 Yes 0 0 No -22 0.56 No 41 72.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68480327 + NM_133509 RAD51B 0 . . . 8.84 91.53 17 4.76 No 5 0.93 Yes 0 0 No -41 0.58 No 46 36.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68895863 + NM_133509 RAD51B 0 . . . 4.03 90.18 45 6.16 Yes 49 0.79 Yes 0 0 No -40 0.53 No 46 76.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108173656 + NM_000051 ATM 0 . . . 2.05 70.1 32 4.31 No 60 -6.18 No 0 0 No -32 0.77 Yes 47 60.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108212706 + NM_000051 ATM 0 . . . 5.05 66.69 17 5.47 No 45 0.69 No 0 0 No -28 0.73 Yes 40 92.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59833591 - NM_032043 BRIP1 0 . . . 1.88 74.06 17 4.58 No 2 0.31 No 0 0 No -22 0.73 Yes 35 65.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190706034 + NM_000534 PMS1 0 . . . 5.87 78.51 23 5.17 No 74 0.78 Yes 0 0 No -23 0.49 No 41 82.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7564044 - NM_000546 TP53 0 . . . 2.51 74.31 14 4.73 No 16 1.48 Yes 0 0 No -12 0.44 No 42 91.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47720979 + NM_000251 MSH2 0 . . . 3.72 81.02 25 5.03 No 48 0.91 Yes 0 0 No -24 0.53 No 50 45.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68369367 + NM_133509 RAD51B 0 . . . 3.52 0 23 3.95 No 62 -4.64 No 0 0 No -49 0.6 No 45 81.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59861200 - NM_032043 BRIP1 0 . . . 1.51 80.65 33 6.16 Yes 3 0.81 Yes 0 0 No -32 0.74 Yes 50 88.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68892086 + NM_133509 RAD51B 0 . . . 3.83 66.76 15 5.39 No 54 0.21 No 0 0 No -26 0.33 No 45 74.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23651064 - NM_024675 PALB2 0 . . . 7.03 86.2 23 5.38 No 9 1.13 Yes 0 0 No -25 0.59 No 49 93.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215607344 - NM_000465 BARD1 0 . . . 1.55 62.7 29 5.88 Yes -3 0.91 Yes 0 0 No -28 0.79 Yes 13 46.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68835229 + NM_004360 CDH1 0 . . . 1.28 77.24 29 5.72 Yes 47 1.3 Yes 0 0 No -21 0.37 No 21 73.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45803793 - NM_001048171 MUTYH 0 . . . 5.31 81.74 29 5.57 Yes 6 2.34 Yes 0 0 No -32 0.35 No 34 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68602641 + NM_133509 RAD51B 0 . . . 2.46 69.84 33 6.24 Yes 6 1.06 Yes 0 0 No -32 0.92 Yes 52 44.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94224371 - NM_005591 MRE11 0 . . . 0.39 68.78 34 6.72 Yes 71 -5.12 No 0 0 No -34 0.32 No 47 66.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41217468 - NM_007294 BRCA1 0 . . . 6.81 80.23 21 5.2 No 57 0.89 Yes 0 0 No -20 0.56 No 43 67.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69135020 + NM_133509 RAD51B 0 . . . 6.61 81.59 23 7.07 Yes 7 0.67 No 0 0 No -22 0.68 Yes 51 89.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68608980 + NM_133509 RAD51B 0 . . . 7.37 76.82 18 5.71 Yes 1 0.17 No 0 0 No -20 0.48 No 43 86.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89657852 + NM_000314 PTEN 0 . . . 1.07 75.56 39 5.92 Yes -1 0.78 Yes 0 0 No -24 0.62 No 53 86.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41223855 - NM_007294 BRCA1 0 . . . 7.95 92.4 20 4.56 No 10 1.24 Yes 0 0 No -20 0.77 Yes 48 92.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41202289 - NM_007294 BRCA1 0 . . . 3.65 71.74 16 4.1 No 34 0.42 No 0 0 No -19 0.51 No 45 54.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68848827 + NM_133509 RAD51B 0 . . . 0.13 67.86 21 5.6 Yes 9 0.44 No 0 0 No -25 0.7 Yes 49 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41214459 - NM_007294 BRCA1 0 . . . 7.32 77.49 24 5.83 Yes 50 -3.61 No 0 0 No -21 0.68 Yes 50 36.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94211182 - NM_005591 MRE11 0 . . . 5.82 69.25 14 4.61 No 50 1.58 Yes 0 0 No -24 0.63 No 48 49.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75491676 - NM_001040108 MLH3 0 . . . 4.85 86.89 16 4.91 No 56 0.39 No 0 0 No -24 0.21 No 49 70.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89666986 + NM_000314 PTEN 0 . . . 8.04 84.23 34 5.62 Yes 3 0.89 Yes 0 0 No -23 0.44 No 42 91.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68738556 + NM_133509 RAD51B 0 . . . 2.14 67.14 35 6.76 Yes -1 0.61 No 0 0 No -32 0.59 No 46 94.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68471365 + NM_133509 RAD51B 0 . . . 0.51 57.03 31 5.81 Yes 26 0.34 No 0 0 No -27 0.61 No 40 46.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94186958 - NM_005591 MRE11 0 . . . 3.08 69.64 29 5.95 Yes 50 1.3 Yes 0 0 No -29 0.66 Yes 43 71.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190702761 + NM_000534 PMS1 0 . . . 2.55 63.9 20 5.07 No 1 0.42 No 0 0 No -19 0.45 No 57 31.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68518044 + NM_133509 RAD51B 0 . . . 2.75 80.01 35 5.51 No 20 0.79 Yes 0 0 No -28 0.67 Yes 37 38.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37092299 + NM_000249 MLH1 0 . . . 3.13 84.54 14 4.14 No 9 1.09 Yes 0 0 No -23 0.8 Yes 49 89.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32902833 + NM_000059 BRCA2 0 . . . 3.26 82.37 23 5.53 No 76 -6.88 No 0 0 No -27 0.61 No 51 59.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89639908 + NM_000314 PTEN 0 . . . 5.6 74.34 21 5.55 No 41 0.59 No 0 0 No -20 0.66 No 41 61.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33448534 - NM_002878 RAD51D 0 . . . 4.06 77.37 9 4.9 No 22 0.47 No 0 0 No -21 0.41 No 44 43.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68633201 + NM_133509 RAD51B 0 . . . 6.41 83.76 19 4.67 No 50 1.18 Yes 0 0 No -18 0.35 No 41 80.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190663813 + NM_000534 PMS1 0 . . . 2.36 69.12 28 4.67 No 35 0.95 Yes 0 0 No -27 0.64 No 23 77.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69101090 + NM_133509 RAD51B 0 . . . 2.63 73.57 22 4.79 No 42 0.76 No 0 0 No -21 0.51 No 29 61.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68914580 + NM_133509 RAD51B 0 . . . 6 84.45 28 5.11 No 76 0.96 Yes 0 0 No -27 0.45 No 42 53.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105203406 + NM_021930 RINT1 0 . . . 0.69 72.49 30 5.92 Yes 65 0.41 No 0 0 No -29 0.49 No 38 19.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48010632 + NM_000179 MSH6 0 . . . 7.43 82.02 18 5.87 Yes 54 -1.97 No 0 0 No -33 0.48 No 49 54.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69098390 + NM_133509 RAD51B 0 . . . 5.42 75.69 22 5.1 No 1 0.26 No 0 0 No -22 0.49 No 20 74.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89701885 + NM_000314 PTEN 0 . . . 4.92 79.58 54 8.11 Yes 51 -3.47 No 0 0 No -36 0.44 No 41 66.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68883916 + NM_133509 RAD51B 0 . . . 5.23 79.19 28 5.38 No 28 1.54 Yes 0 0 No -27 0.64 No 34 91.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131893943 + NM_005732 RAD50 0 . . . 7.55 78.41 20 4.79 No 8 0.6 No 0 0 No -19 0.89 Yes 42 45.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68530457 + NM_133509 RAD51B 0 . . . 0.44 67.96 20 4.38 No 6 0.16 No 0 0 No -20 0.49 No 60 41.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68349893 + NM_133509 RAD51B 0 . . . 4.89 74.09 19 4 No 58 1.2 Yes 0 0 No -18 0.59 No 49 63.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89638955 + NM_000314 PTEN 0 . . . 5.23 84.45 21 5.16 No 39 -3.56 No 0 0 No -20 0.79 Yes 49 55.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37051069 + NM_000249 MLH1 0 . . . 3.23 73.31 23 4.41 No 69 -4.78 No 0 0 No -22 0.68 Yes 49 53.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47642259 + NM_000251 MSH2 0 . . . 3.23 0 30 5.48 No 27 1.87 Yes 0 0 No -29 0.88 Yes 38 75.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75479508 - NM_001040108 MLH3 0 . . . 1.8 70.54 16 4.38 No 73 -2.95 No 0 0 No -21 0.69 Yes 22 77.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108235986 + NM_000051 ATM 0 . . . 4.12 0 31 6.47 Yes 75 0.98 Yes 0 0 No -37 0.41 No 44 61.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131956209 + NM_005732 RAD50 0 . . . 7.48 82.4 18 4.25 No 49 0.17 No 0 0 No -17 0.52 No 42 85.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68477302 + NM_133509 RAD51B 0 . . . 3.08 86.21 17 4.24 No 30 0.91 Yes 0 0 No -51 0.64 No 46 91.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190653539 + NM_000534 PMS1 0 . . . 4.8 68.52 21 4.86 No 65 0.22 No 0 0 No -21 0.8 Yes 46 82.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68471220 + NM_133509 RAD51B 0 . . . 4.79 83.66 29 4.62 No 36 0.74 No 0 0 No -24 0.46 No 35 80.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56777638 + NM_058216 RAD51C 0 . . . 4.64 0 30 5.3 No 16 1.11 Yes 0 0 No -23 0.72 Yes 22 63.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59893731 - NM_032043 BRIP1 0 . . . 3.78 66.68 15 4.94 No 39 -3.3 No 0 0 No -55 0.47 No 43 71.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68918467 + NM_133509 RAD51B 0 . . . 5.52 79.91 23 5.2 No 15 0.84 Yes 0 0 No -22 0.67 Yes 43 96.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32893258 + NM_000059 BRCA2 0 . . . 0.19 0 25 4.34 No 57 0.21 No 0 0 No -24 0.5 No 46 60.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68861359 + NM_133509 RAD51B 0 . . . 3.24 67.3 26 5.35 No 50 2.23 Yes 0 0 No -25 0.69 Yes 44 75.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190698641 + NM_000534 PMS1 0 . . . 10.68 83.83 93 8.29 Yes 49 -2.76 No 0 0 No -36 0.77 Yes 45 68.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59913979 - NM_032043 BRIP1 0 . . . 3.95 86.91 27 5.59 Yes 19 1.48 Yes 0 0 No -26 0.85 Yes 39 75.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68870660 + NM_004360 CDH1 0 . . . 4.52 72.69 16 4.69 No 57 0.79 Yes 0 0 No -46 0.52 No 45 67.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215631809 - NM_000465 BARD1 0 . . . 0.69 64.96 43 7.11 Yes 0 0.9 Yes 0 0 No -32 0.69 Yes 58 48.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68866691 + NM_133509 RAD51B 0 . . . 2.04 83.1 20 5.1 No 36 1.53 Yes 0 0 No -19 0.45 No 41 27.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59871488 - NM_032043 BRIP1 0 . . . 5.9 78 35 6.07 Yes 10 0.4 No 0 0 No -34 0.67 Yes 44 52.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59754787 - NM_032043 BRIP1 0 . . . 1.74 67.5 31 5.83 Yes 42 0.55 No 0 0 No -30 0.91 Yes 39 61.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68519055 + NM_133509 RAD51B 0 . . . 1.96 72.99 34 5.03 No 43 -3.83 No 0 0 No -33 0.32 No 38 74.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68537439 + NM_133509 RAD51B 0 . . . 1 79.42 16 4.69 No -2 1.17 Yes 0 0 No -44 0.49 No 50 62.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68300619 + NM_133509 RAD51B 0 . . . 9.35 85.96 20 5.08 No 3 1.63 Yes 0 0 No -19 0.61 No 49 75.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94222448 - NM_005591 MRE11 0 . . . 5.16 71.97 47 6.93 Yes 74 0.64 No 0 0 No -19 0.38 No 27 41.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105186691 + NM_021930 RINT1 0 . . . 2.8 70.6 23 5.36 No 74 -4.64 No 0 0 No -23 0.51 No 46 84.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1207504 + NM_000455 STK11 0 . . . 1.73 69.27 47 5.32 No 44 -3.18 No 0 0 No -31 0.42 No 49 38.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69122531 + NM_133509 RAD51B 0 . . . 7.99 88.09 23 4.13 No 13 -1 No 0 0 No -22 0.95 Yes 51 49.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215611906 - NM_000465 BARD1 0 . . . 3.62 77.76 17 4.58 No 3 1.68 Yes 0 0 No -42 0.8 Yes 38 74.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29084969 - NM_001005735 CHEK2 0 . . . 5.92 83.97 20 4.8 No 43 0.76 No 0 0 No -19 0.75 Yes 39 48.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89697530 + NM_000314 PTEN 0 . . . 2.87 71.2 27 5.2 No 21 0.84 Yes 0 0 No -26 0.51 No 41 83.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131916550 + NM_005732 RAD50 0 . . . 7.77 77.89 27 6.54 Yes 45 0.02 No 0 0 No -26 0.77 Yes 44 86.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69062848 + NM_133509 RAD51B 0 . . . 6.67 85.24 31 4.03 No 50 0.59 No 0 0 No -28 0.78 Yes 53 48.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47762739 + NM_000251 MSH2 0 . . . 1.16 0 21 5.2 No 11 0.3 No 0 0 No -26 0.64 No 52 73.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90951654 - NM_002485 NBN 0 . . . 8.4 81.63 20 5 No 23 2.42 Yes 0 0 No -22 0.68 Yes 35 94.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59917886 - NM_032043 BRIP1 0 . . . 3.28 72.54 36 5.48 No 23 0.4 No 0 0 No -28 0.57 No 34 64.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190660836 + NM_000534 PMS1 0 . . . 0.09 74.68 18 4.47 No 4 0.41 No 0 0 No -17 0.63 No 54 79.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68951735 + NM_133509 RAD51B 0 . . . 6.09 86.61 16 5.29 No 22 0.15 No 0 0 No -28 0.35 No 50 96.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29097785 - NM_001005735 CHEK2 0 . . . 5.1 72.73 49 7.12 Yes 6 0.79 Yes 0 0 No -24 0.59 No 46 53.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94171210 - NM_005591 MRE11 0 . . . 3.37 68.95 15 4.93 No 16 1.11 Yes 0 0 No -26 0.53 No 42 92.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89713176 + NM_000314 PTEN 0 . . . 2.67 72.47 28 4.08 No 40 1.37 Yes 0 0 No -27 0.39 No 46 67.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94148735 - NM_005591 MRE11 0 . . . 0.49 64.68 16 4.34 No -2 0.19 No 0 0 No -15 0.54 No 45 57.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68976789 + NM_133509 RAD51B 0 . . . 3.09 77.02 16 6.4 Yes 14 2.15 Yes 0 0 No -26 0.68 Yes 44 70.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68644193 + NM_133509 RAD51B 0 . . . 0.79 0 13 4.36 No 27 1.11 Yes 0 0 No -32 0.69 Yes 31 63.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69009586 + NM_133509 RAD51B 0 . . . 2.95 82.25 31 4.95 No 3 0.95 Yes 0 0 No -31 0.61 No 30 92.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68714828 + NM_133509 RAD51B 0 . . . 0.37 70.54 39 4.99 No 10 0.96 Yes 0 0 No -35 0.36 No 48 88.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84396179 - NM_139076 FAM175A 0 . . . 2.72 0 23 6.56 Yes 7 1.25 Yes 0 0 No -22 0.49 No 51 72.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90979447 - NM_002485 NBN 0 . . . 3.26 73.84 21 6.56 Yes 12 1.96 Yes 0 0 No -20 0.84 Yes 46 88.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68778800 + NM_004360 CDH1 0 . . . 5.59 80.77 19 5.7 Yes 46 0.13 No 0 0 No -27 0.42 No 40 76.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108126197 + NM_000051 ATM 0 . . . 3.75 84.95 37 5.89 Yes 39 1.66 Yes 0 0 No -34 0.35 No 19 91.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68890415 + NM_133509 RAD51B 0 . . . 6.28 72.25 34 6.29 Yes 58 1.37 Yes 0 0 No -28 0.58 No 43 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190728920 + NM_000534 PMS1 0 . . . 5.37 82.81 15 5.07 No 22 -3.38 No 0 0 No -22 0.24 No 49 70.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190739001 + NM_000534 PMS1 0 . . . 4.13 76.25 20 6.22 Yes 28 0.45 No 0 0 No -19 0.91 Yes 43 51.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68946569 + NM_133509 RAD51B 0 . . . 6.66 86.87 24 6.32 Yes 6 1.25 Yes 0 0 No -23 0.91 Yes 52 77.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68552589 + NM_133509 RAD51B 0 . . . 7.79 72.91 47 7.57 Yes 13 0.15 No 0 0 No -34 0.61 No 45 94.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29082294 - NM_001005735 CHEK2 0 . . . 1.71 79.02 31 5.21 No 70 -5.98 No 0 0 No -30 0.5 No 49 62.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215591409 - NM_000465 BARD1 0 . . . 9.09 83.51 19 5.48 No 13 0.56 No 0 0 No -18 0.52 No 40 65.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190703740 + NM_000534 PMS1 0 . . . 3.41 0 21 4.9 No 15 0.91 Yes 0 0 No -20 0.82 Yes 43 57.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59941144 - NM_032043 BRIP1 0 . . . 0.66 72.32 25 6.45 Yes 21 0.23 No 0 0 No -24 0.78 Yes 47 58.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108132163 + NM_000051 ATM 0 . . . 2.07 79.69 43 6.49 Yes 8 0.31 No 0 0 No -42 0.79 Yes 45 77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105180198 + NM_021930 RINT1 0 . . . 0.81 0 10 5.48 No 1 0.73 No 0 0 No -23 0.63 No 57 44.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84401604 - NM_139076 FAM175A 0 . . . 4.07 71.07 20 4.55 No 33 0.71 No 0 0 No -17 0.35 No 43 76.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59900811 - NM_032043 BRIP1 0 . . . 6.24 92.78 55 7.54 Yes 46 1.12 Yes 0 0 No -32 0.8 Yes 48 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94219938 - NM_005591 MRE11 0 . . . 3.89 63.32 18 4.9 No 60 0.99 Yes 0 0 No -24 0.74 Yes 24 84.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190684408 + NM_000534 PMS1 0 . . . 4.2 85.58 24 5.29 No 37 0.77 No 0 0 No -21 0.59 No 38 83.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75508941 - NM_001040108 MLH3 0 . . . 6.99 77.62 21 5.04 No 75 -5.51 No 0 0 No -26 0.8 Yes 42 48.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69037540 + NM_133509 RAD51B 0 . . . 2.05 71.4 20 5.91 Yes -4 0.85 Yes 0 0 No -20 0.64 No 45 16.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68765080 + NM_133509 RAD51B 0 . . . 1.1 0 15 4.82 No 65 -4.88 No 0 0 No -26 0.43 No 61 16.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32931751 + NM_000059 BRCA2 0 . . . 4.43 72.65 25 4.26 No 6 0.55 No 0 0 No -25 0.67 Yes 44 60.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215602521 - NM_000465 BARD1 0 . . . 3.89 85.7 21 5.76 Yes 74 1.32 Yes 0 0 No -20 0.52 No 48 43.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190701510 + NM_000534 PMS1 0 . . . 2.06 73.7 33 5.21 No -2 0.17 No 0 0 No -22 0.53 No 49 58.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47717070 + NM_000251 MSH2 0 . . . 1.56 79.02 45 10.1 Yes -4 0.56 No 0 0 No -30 0.46 No 42 49.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94196121 - NM_005591 MRE11 0 . . . 7.55 93.5 37 6.68 Yes 12 1.38 Yes 0 0 No -36 0.85 Yes 46 95.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41208237 - NM_007294 BRCA1 0 . . . 1.27 76.63 19 4.8 No 58 0.29 No 0 0 No -41 0.81 Yes 43 50.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68828352 + NM_004360 CDH1 0 . . . 3.33 59.57 49 7.28 Yes 13 0.12 No 0 0 No -48 0.43 No 45 61.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23640533 - NM_024675 PALB2 0 . . . 3.77 74.94 57 7.62 Yes 68 1.01 Yes 0 0 No -35 0.28 No 47 72.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29093604 - NM_001005735 CHEK2 0 . . . 2.04 76.63 17 6 Yes 64 -5.08 No 0 0 No -16 0.69 Yes 48 79.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32895996 + NM_000059 BRCA2 0 . . . 6.87 84.83 18 4.69 No 41 0.82 Yes 0 0 No -24 0.31 No 43 86.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47724168 + NM_000251 MSH2 0 . . . 1.03 70.92 28 5.29 No 62 1.17 Yes 0 0 No -28 0.64 No 43 78.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68508024 + NM_133509 RAD51B 0 . . . 3.38 70.59 13 5.2 No 14 1.23 Yes 0 0 No -51 0.71 Yes 40 66.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68928746 + NM_133509 RAD51B 0 . . . 4.21 67.93 26 5.42 No 31 -2.95 No 0 0 No -25 0.47 No 47 76.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89732069 + NM_000314 PTEN 0 . . . 5.2 78.8 19 5.52 No 44 0.4 No 0 0 No -25 0.54 No 47 57.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69004528 + NM_133509 RAD51B 0 . . . 6.67 81.44 15 5.17 No 17 1.13 Yes 0 0 No -20 0.45 No 41 66.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68692079 + NM_133509 RAD51B 0 . . . 0.17 83.26 32 4.67 No 16 1.52 Yes 0 0 No -31 0.52 No 42 92.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47694334 + NM_000251 MSH2 0 . . . 3.46 84.95 27 5.38 No 67 1.13 Yes 0 0 No -26 0.86 Yes 14 89.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69094453 + NM_133509 RAD51B 0 . . . 5.3 67.56 27 5.74 Yes -4 1.38 Yes 0 0 No -26 0.78 Yes 40 62.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190711870 + NM_000534 PMS1 0 . . . 9.82 87.15 20 4.63 No 42 1.7 Yes 0 0 No -19 0.61 No 47 46.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6039135 - NM_000535 PMS2 0 . . . 5.9 0 23 4.3 No 54 0.87 Yes 0 0 No -19 0.39 No 42 76.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68401602 + NM_133509 RAD51B 0 . . . 3.93 77.27 19 4.24 No 75 2.08 Yes 0 0 No -55 0.68 Yes 47 86.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108172307 + NM_000051 ATM 0 . . . 4.13 79 18 5.3 No 72 0.76 No 0 0 No -28 0.47 No 45 75.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68562069 + NM_133509 RAD51B 0 . . . 5.14 78.56 20 5.43 No 9 0.98 Yes 0 0 No -25 0.56 No 49 70.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68354611 + NM_133509 RAD51B 0 . . . 5.66 80.96 31 5.97 Yes 8 0.64 No 0 0 No -30 0.9 Yes 50 66.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190681438 + NM_000534 PMS1 0 . . . 3.35 84.79 31 5.83 Yes 41 1.07 Yes 0 0 No -30 0.93 Yes 49 68.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68834815 + NM_004360 CDH1 0 . . . 6.65 82.95 35 4.96 No 70 0.94 Yes 0 0 No -28 0.6 No 40 74.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94223291 - NM_005591 MRE11 0 . . . 0.55 75.37 39 6.24 Yes 73 -5.19 No 0 0 No -38 0.55 No 48 53.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7579307 - NM_000546 TP53 0 . . . 4.55 69.58 23 4.91 No 2 0.07 No 0 0 No -22 0.68 Yes 56 47.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68310174 + NM_133509 RAD51B 0 . . . 3.45 70.95 16 4.69 No 46 0.6 No 0 0 No -51 0.28 No 46 74.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68348136 + NM_133509 RAD51B 0 . . . 1.89 72.13 19 6.32 Yes 21 1.43 Yes 0 0 No -20 0.65 No 37 83.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190728979 + NM_000534 PMS1 0 . . . 3.59 72.84 11 5.65 Yes 5 0.34 No 0 0 No -23 0.7 Yes 50 58.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32920319 + NM_000059 BRCA2 0 . . . 3.73 76.01 34 5.39 No 24 1.35 Yes 0 0 No -23 0.48 No 49 94.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47656699 + NM_000251 MSH2 0 . . . 6.67 84.97 24 5.47 No 57 1.18 Yes 0 0 No -24 0.62 No 48 56.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47737301 + NM_000251 MSH2 0 . . . 4.2 77.95 20 4.69 No 17 0.47 No 0 0 No -19 0.8 Yes 41 93.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21989488 - NM_000077 CDKN2A 0 . . . 4.39 74.86 20 5.1 No 11 0.87 Yes 0 0 No -24 0.52 No 47 78.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131916009 + NM_005732 RAD50 0 . . . 3.28 85.29 41 6.48 Yes 43 0.55 No 0 0 No -25 0.55 No 44 78.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68627669 + NM_133509 RAD51B 0 . . . 2.98 67.2 12 4.9 No 43 0.26 No 0 0 No -17 0.51 No 38 59.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68491442 + NM_133509 RAD51B 0 . . . 3.16 63.52 23 4.78 No 45 1.08 Yes 0 0 No -22 0.43 No 45 38.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94192591 - NM_005591 MRE11 0 . . . 1.88 71.01 12 4.9 No 0 0.21 No 0 0 No -19 0.55 No 42 70.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68786301 + NM_004360 CDH1 0 . . . 0.65 0 22 8.06 Yes 48 1.36 Yes 0 0 No -21 0.79 Yes 26 56.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68948202 + NM_133509 RAD51B 0 . . . 2.9 77.55 15 5.74 Yes 74 0.37 No 0 0 No -46 0.67 Yes 48 67.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68455786 + NM_133509 RAD51B 0 . . . 4.47 81.32 22 5.1 No 6 0.87 Yes 0 0 No -21 0.78 Yes 52 92.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68928255 + NM_133509 RAD51B 0 . . . 1.09 79.02 24 7.12 Yes 5 0.28 No 0 0 No -23 0.69 Yes 50 95.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190738290 + NM_000534 PMS1 0 . . . 0.14 64.26 20 6.81 Yes 12 1.37 Yes 0 0 No -19 0.32 No 46 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59855384 - NM_032043 BRIP1 0 . . . 4.28 66.41 19 4.45 No 45 0.24 No 0 0 No -27 0.63 No 13 46.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68626848 + NM_133509 RAD51B 0 . . . 0.23 0 21 5.04 No 50 0.77 Yes 0 0 No -20 0.38 No 44 52.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52437432 - NM_004656 BAP1 0 . . . 4.85 79.09 29 7.34 Yes 63 0.57 No 0 0 No -28 0.88 Yes 51 64.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68807044 + NM_133509 RAD51B 0 . . . 1.46 78.61 19 5.83 Yes 23 0.58 No 0 0 No -27 0.6 No 35 57.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68802643 + NM_133509 RAD51B 0 . . . 0 70.95 27 6.32 Yes 53 -4.89 No 0 0 No -26 0.92 Yes 43 68.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37060860 + NM_000249 MLH1 0 . . . 2.34 65.05 20 6 Yes -1 1.32 Yes 0 0 No -19 0.85 Yes 43 85.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131939322 + NM_005732 RAD50 0 . . . 0.89 0 64 8.29 Yes 59 -2.69 No 0 0 No -26 0.87 Yes 36 43.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68492076 + NM_133509 RAD51B 0 . . . 2.38 74.64 31 8.26 Yes 50 0.33 No 0 0 No -31 0.52 No 55 47.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131974145 + NM_005732 RAD50 0 . . . 0.39 0 29 5.83 Yes 49 1.49 Yes 0 0 No -28 0.85 Yes 56 19.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105174644 + NM_021930 RINT1 0 . . . 4.24 78.66 17 4.78 No 12 0.91 Yes 0 0 No -16 0.47 No 46 62.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68312844 + NM_133509 RAD51B 0 . . . 1.37 69.7 26 5.03 No 65 -1.15 No 0 0 No -48 0.5 No 53 52.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108118504 + NM_000051 ATM 0 . . . 4.73 85.02 12 5.39 No 4 1.12 Yes 0 0 No -28 0.39 No 54 79.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59818889 - NM_032043 BRIP1 0 . . . 0.67 76.86 28 5.38 No 41 1.26 Yes 0 0 No -27 0.84 Yes 47 44.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68562104 + NM_133509 RAD51B 0 . . . 2.02 67.39 16 4.69 No 44 0.94 Yes 0 0 No -32 0.3 No 14 63.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32941659 + NM_000059 BRCA2 0 . . . 0.17 63.62 36 6.03 Yes 19 1.19 Yes 0 0 No -25 0.52 No 39 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41224847 - NM_007294 BRCA1 0 . . . 0.87 74.68 24 5.17 No 55 -3.16 No 0 0 No -23 0.89 Yes 54 85.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37065127 + NM_000249 MLH1 0 . . . 4.45 81.32 23 6.95 Yes 73 -3.03 No 0 0 No -22 0.8 Yes 40 50.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68550762 + NM_133509 RAD51B 0 . . . 3.48 67.11 17 4.8 No 43 -2.87 No 0 0 No -16 0.34 No 36 68.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32944825 + NM_000059 BRCA2 0 . . . 6.85 84.05 37 6.08 Yes 67 0.5 No 0 0 No -19 0.46 No 44 61.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131959747 + NM_005732 RAD50 0 . . . 0.02 63.01 28 6.23 Yes 21 0.71 No 0 0 No -27 0.81 Yes 37 84.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68391125 + NM_133509 RAD51B 0 . . . 3.04 76.86 25 5.29 No 7 1.35 Yes 0 0 No -24 0.78 Yes 45 60.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69041396 + NM_133509 RAD51B 0 . . . 1.9 77.33 39 6.6 Yes 58 -4.25 No 0 0 No -31 0.59 No 49 71.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68901488 + NM_133509 RAD51B 0 . . . 2.02 63.43 28 5.38 No 40 0.23 No 0 0 No -27 0.8 Yes 39 47.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68845640 + NM_133509 RAD51B 0 . . . 7.01 85.59 14 5.99 Yes 63 0.68 No 0 0 No -19 0.68 Yes 52 78.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37075795 + NM_000249 MLH1 0 . . . 3.7 0 40 7.14 Yes 4 0.64 No 0 0 No -39 0.85 Yes 54 64.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33435481 - NM_002878 RAD51D 0 . . . 4.22 65.11 22 6.72 Yes 64 0.63 No 0 0 No -21 0.93 Yes 54 14.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32970295 + NM_000059 BRCA2 0 . . . 2.24 80.12 15 5.38 No 7 1.02 Yes 0 0 No -28 0.77 Yes 51 86.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68860202 + NM_133509 RAD51B 0 . . . 2.5 75.53 24 6.18 Yes -1 0.61 No 0 0 No -23 0.54 No 28 64.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68809054 + NM_133509 RAD51B 0 . . . 4.52 90.22 31 6 Yes 73 0.25 No 0 0 No -23 0.58 No 46 94.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105207523 + NM_021930 RINT1 0 . . . 4.13 76.34 32 5.74 Yes 69 0.06 No 28 0.9 Yes -31 0.63 No 46 86.39 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr13 32956028 + NM_000059 BRCA2 0 . . . 8.34 82.21 26 5.86 Yes 70 -3.89 No 0 0 No -25 0.86 Yes 44 73.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152354734 - NM_005431 XRCC2 0 . . . 0.39 74.34 27 4.07 No 74 0.65 No 0 0 No -26 0.65 No 44 89.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68766203 + NM_133509 RAD51B 0 . . . 0.77 63.13 23 4.9 No 61 -5.2 No 0 0 No -22 0.97 Yes 40 49.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89664484 + NM_000314 PTEN 0 . . . 1.01 62.19 17 3.98 No 16 0.74 No 0 0 No -23 0.78 Yes 42 68.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41267275 - NM_007294 BRCA1 0 . . . 3.52 68.34 22 6.05 Yes 21 1.71 Yes 0 0 No -26 0.8 Yes 37 80.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68860522 + NM_133509 RAD51B 0 . . . 7 88.74 27 5.2 No 7 1.06 Yes 0 0 No -43 0.53 No 37 64.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68912788 + NM_133509 RAD51B 0 . . . 7.89 75.34 24 5.93 Yes 53 0.26 No 0 0 No -23 0.56 No 42 69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41273328 - NM_007294 BRCA1 0 . . . 3.83 74.53 13 4.35 No -4 0.73 No 0 0 No -17 0.45 No 49 63.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68754708 + NM_133509 RAD51B 0 . . . 0.74 69.74 16 5.57 Yes -3 0.51 No 0 0 No -32 0.72 Yes 49 51.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68307170 + NM_133509 RAD51B 0 . . . 2.65 73.07 16 5.41 No 36 -3.98 No 0 0 No -24 0.92 Yes 40 73.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23648376 - NM_024675 PALB2 0 . . . 1.23 74.73 15 3.87 No 33 1.01 Yes 0 0 No -24 0.41 No 25 51.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68800424 + NM_133509 RAD51B 0 . . . 1.45 69.12 19 4.33 No -1 0.43 No 0 0 No -29 0.66 No 47 55.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68758017 + NM_133509 RAD51B 0 . . . 4.17 70.06 21 4.47 No 16 1.16 Yes 0 0 No -20 0.9 Yes 42 91.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47688343 + NM_000251 MSH2 0 . . . 7.12 84.45 53 6.81 Yes 50 0.43 No 0 0 No -25 0.58 No 46 67.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23650618 - NM_024675 PALB2 0 . . . 1.14 77.34 23 4.87 No 13 0.77 No 0 0 No -22 0.86 Yes 45 63.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90949480 - NM_002485 NBN 0 . . . 4.02 65.81 43 7.17 Yes 44 -1.84 No 0 0 No -42 0.41 No 46 55.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68406087 + NM_133509 RAD51B 0 . . . 5.57 77.51 17 4.8 No 59 0.49 No 0 0 No -16 0.32 No 49 47.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23647114 - NM_024675 PALB2 0 . . . 3.73 0 20 5.72 Yes 76 -5.45 No 0 0 No -24 0.39 No 43 47.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190682336 + NM_000534 PMS1 0 . . . 3.49 0 23 5.12 No 40 -2.37 No 0 0 No -22 0.66 Yes 45 52.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68921372 + NM_133509 RAD51B 0 . . . 7.09 72.7 30 6.98 Yes 1 0.12 No 0 0 No -29 0.54 No 49 63.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56778302 + NM_058216 RAD51C 0 . . . 5.97 90.27 35 6.95 Yes 2 1.28 Yes 0 0 No -34 0.68 Yes 20 47.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68978903 + NM_133509 RAD51B 0 . . . 6.29 78.29 23 5 No 15 0.52 No 0 0 No -27 0.57 No 43 46.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215657310 - NM_000465 BARD1 0 . . . 4.81 74.51 17 5.33 No 15 0.36 No 0 0 No -29 0.63 No 43 71.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68990598 + NM_133509 RAD51B 0 . . . 3.87 73.22 24 4.91 No 68 -4.13 No 0 0 No -18 0.62 No 45 86.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68951337 + NM_133509 RAD51B 0 . . . 2.89 68.34 17 4.82 No 21 1.7 Yes 0 0 No -31 0.51 No 37 57.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37068404 + NM_000249 MLH1 0 . . . 5.33 89.02 17 6.08 Yes 36 0.04 No 0 0 No -16 0.71 Yes 39 32.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29111454 - NM_001005735 CHEK2 0 . . . 0.06 78.88 33 6.2 Yes 58 -4.46 No 0 0 No -32 0.59 No 55 40.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215623727 - NM_000465 BARD1 0 . . . 0.53 0 41 7.08 Yes 73 0.8 Yes 0 0 No -32 0.68 Yes 20 69.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68753449 + NM_133509 RAD51B 0 . . . 6.49 83.53 16 5.66 Yes 10 0.49 No 0 0 No -25 0.34 No 48 82.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68580591 + NM_133509 RAD51B 0 . . . 4.81 66.13 31 5.49 No 30 0.1 No 0 0 No -25 0.49 No 39 94.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47742542 + NM_000251 MSH2 0 . . . 5.98 79.72 36 5.54 No 60 1.75 Yes 0 0 No -19 0.54 No 53 53.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69038547 + NM_133509 RAD51B 0 . . . 4.48 83.04 45 7.14 Yes 73 -2.64 No 0 0 No -44 0.74 Yes 31 76.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37049896 + NM_000249 MLH1 0 . . . 3.32 70.85 19 3.81 No 23 1.57 Yes 0 0 No -25 0.45 No 45 82.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59795403 - NM_032043 BRIP1 0 . . . 3.75 71.51 26 4.67 No 7 0.42 No 0 0 No -25 0.72 Yes 42 39.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32974158 + NM_000059 BRCA2 0 . . . 4.38 79.71 18 4.89 No 58 1.01 Yes 0 0 No -23 0.61 No 44 62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68408088 + NM_133509 RAD51B 0 . . . 3.61 72.59 14 5.15 No 4 1.55 Yes 0 0 No -22 0.49 No 43 52.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68779791 + NM_004360 CDH1 0 . . . 0.62 67.52 40 5.99 Yes 72 0.95 Yes 0 0 No -29 0.37 No 54 21.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195742 + NM_000051 ATM 0 . . . 8.49 92.45 25 6.64 Yes 9 1.01 Yes 0 0 No -24 0.89 Yes 49 91.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68813640 + NM_004360 CDH1 0 . . . 1.74 65.89 23 5.2 No 47 0.27 No 0 0 No -22 0.78 Yes 43 87.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21984913 - NM_000077 CDKN2A 0 . . . 1.7 76.38 45 6.24 Yes 26 1.22 Yes 0 0 No -27 0.77 Yes 32 93.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131971891 + NM_005732 RAD50 0 . . . 2.22 60.54 14 4.36 No 25 1.47 Yes 0 0 No -40 0.47 No 32 51.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32971122 + NM_000059 BRCA2 0 . . . 0.09 64.67 35 6.07 Yes 69 -4.25 No 0 0 No -22 0.38 No 21 43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47636034 + NM_000251 MSH2 0 . . . 1.47 74.55 34 7.71 Yes 63 0.66 No 0 0 No -33 0.45 No 46 52.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68457262 + NM_133509 RAD51B 0 . . . 1.81 73.65 16 6.86 Yes 5 0.71 No 0 0 No -28 0.46 No 35 91.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41238087 - NM_007294 BRCA1 0 . . . 0.96 70.54 26 5.54 No 19 -2.01 No 0 0 No -25 0.91 Yes 50 51.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68594866 + NM_133509 RAD51B 0 . . . 1.64 70.05 23 6.14 Yes -2 0.21 No 0 0 No -22 0.86 Yes 50 31.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32920551 + NM_000059 BRCA2 0 . . . 1.26 0 31 4.51 No 44 1.02 Yes 0 0 No -30 0.59 No 42 68.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190674323 + NM_000534 PMS1 0 . . . 0.09 74.68 21 4.55 No 4 0.41 No 0 0 No -21 0.46 No 54 84.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68301105 + NM_133509 RAD51B 0 . . . 3.19 82.73 38 4.63 No 35 -3.29 No 0 0 No -26 0.69 Yes 49 71.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68749205 + NM_133509 RAD51B 0 . . . 7.55 84.22 25 4.03 No 5 0.61 No 0 0 No -43 0.71 Yes 34 83.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152352996 - NM_005431 XRCC2 0 . . . 0.4 71.08 42 6.39 Yes 41 1.47 Yes 0 0 No -42 0.51 No 57 40.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108101547 + NM_000051 ATM 0 . . . 1.65 81.72 41 7.62 Yes 33 1.12 Yes 0 0 No -40 0.76 Yes 50 81.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47664908 + NM_000251 MSH2 0 . . . 4.35 74.98 30 6.16 Yes 37 0.73 No 0 0 No -24 0.9 Yes 48 61.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48020211 + NM_000179 MSH6 0 . . . 0.83 74.23 17 6.48 Yes 69 1.37 Yes 0 0 No -25 0.61 No 54 74.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29123571 - NM_001005735 CHEK2 0 . . . 1.84 0 23 3.9 No 45 1.34 Yes 0 0 No -11 0.43 No 44 71.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108129524 + NM_000051 ATM 0 . . . 4.06 70.42 25 5.92 Yes 49 1.43 Yes 0 0 No -24 0.51 No 45 68.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23620546 - NM_024675 PALB2 0 . . . 5.45 87.63 14 5 No 32 0.39 No 0 0 No -25 0.45 No 19 67.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68841071 + NM_133509 RAD51B 0 . . . 6.37 82.08 21 5.2 No 20 0.7 No 0 0 No -27 0.62 No 34 88.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108212615 + NM_000051 ATM 0 . . . 0.29 66.56 31 5.45 No 71 -6.17 No 0 0 No -30 0.49 No 39 55.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59933062 - NM_032043 BRIP1 0 . . . 4.32 76.44 24 5.77 Yes 13 -2.9 No 0 0 No -23 0.9 Yes 45 57.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105188186 + NM_021930 RINT1 0 . . . 4.74 84.41 15 5.17 No 24 1.9 Yes 0 0 No -25 0.73 Yes 34 80.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89697725 + NM_000314 PTEN 0 . . . 2.18 79.18 16 5 No 3 1.26 Yes 0 0 No -15 0.31 No 43 71.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48030939 + NM_000179 MSH6 0 . . . 0.2 0 40 7.32 Yes 36 0.51 No 0 0 No -39 0.41 No 53 33.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32898677 + NM_000059 BRCA2 0 . . . 0.91 65.71 19 5 No 56 -5.29 No 0 0 No -18 0.56 No 44 71.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41003277 + NM_001164269 RAD51 0 . . . 0.34 66.69 19 4.38 No 41 -4.42 No 0 0 No -24 0.65 No 43 72.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68716694 + NM_133509 RAD51B 0 . . . 5.29 85.49 31 5.54 No 8 0.54 No 0 0 No -24 0.86 Yes 50 79.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41233614 - NM_007294 BRCA1 0 . . . 2.99 68.16 102 9.87 Yes 44 -4.88 No 0 0 No -27 0.85 Yes 50 55.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68511511 + NM_133509 RAD51B 0 . . . 3.38 64.01 38 6.32 Yes 73 1.8 Yes 0 0 No -37 0.67 Yes 50 61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90957201 - NM_002485 NBN 0 . . . 2.5 80.01 25 4.68 No 15 0.86 Yes 0 0 No -24 0.73 Yes 43 74.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68790615 + NM_133509 RAD51B 0 . . . 0.69 75.29 30 5.25 No -3 0.2 No 0 0 No -32 0.6 No 49 44.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89679955 + NM_000314 PTEN 0 . . . 0.07 64.39 29 5.29 No 26 1.25 Yes 0 0 No -21 0.75 Yes 32 41.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108234223 + NM_000051 ATM 0 . . . 3.72 82.59 20 5.48 No 69 0.67 No 0 0 No -20 0.55 No 45 88.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68980581 + NM_133509 RAD51B 0 . . . 5.64 74.08 25 5.57 Yes 11 0.64 No 0 0 No -22 0.4 No 47 59.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68819558 + NM_133509 RAD51B 0 . . . 2.21 84.05 49 7.63 Yes 36 1.06 Yes 0 0 No -27 0.92 Yes 39 76.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68573303 + NM_133509 RAD51B 0 . . . 11.76 98.6 17 4.8 No 11 0.65 No 0 0 No -20 0.45 No 47 77.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68957062 + NM_133509 RAD51B 0 . . . 1.4 75.98 30 6.63 Yes 62 0.42 No 0 0 No -29 0.8 Yes 44 75.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32929750 + NM_000059 BRCA2 0 . . . 1.86 76.51 43 6.56 Yes 51 1.18 Yes 0 0 No -30 0.5 No 54 77.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68752779 + NM_133509 RAD51B 0 . . . 2.75 73.15 30 6.95 Yes 18 1.25 Yes 0 0 No -29 0.92 Yes 43 42.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29087721 - NM_001005735 CHEK2 0 . . . 8.3 87.07 20 4.84 No 51 1.14 Yes 0 0 No -26 0.71 Yes 45 51.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94228644 - NM_005591 MRE11 0 . . . 9.06 77.76 23 5.2 No 27 2.08 Yes 0 0 No -22 0.88 Yes 31 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68803945 + NM_133509 RAD51B 0 . . . 5.4 67.16 176 11.69 Yes 40 0.34 No 0 0 No -29 0.86 Yes 40 69.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108230230 + NM_000051 ATM 0 . . . 4.82 88.67 18 4.47 No 43 0.05 No 0 0 No -27 0.66 No 48 68.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104178383 - NM_001100119 XRCC3 0 . . . 0.93 0 10 4.8 No 76 1 Yes 0 0 No -24 0.6 No 45 88.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68620984 + NM_133509 RAD51B 0 . . . 9.15 89.83 19 4.47 No 50 0.41 No 0 0 No -18 0.82 Yes 35 58.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108186151 + NM_000051 ATM 0 . . . 2.84 72.6 16 5.44 No 24 1.12 Yes 0 0 No -24 0.85 Yes 44 85.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32960703 + NM_000059 BRCA2 0 . . . 1.94 65.46 25 4.59 No 12 0.04 No 0 0 No -24 0.67 Yes 43 75.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59792368 - NM_032043 BRIP1 0 . . . 0.72 77.77 19 6.08 Yes 33 1.02 Yes 0 0 No -18 0.9 Yes 20 59.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68843821 + NM_133509 RAD51B 0 . . . 1.26 0 53 5.93 Yes 1 0.6 No 0 0 No -34 0.62 No 57 52.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47700615 + NM_000251 MSH2 0 . . . 0.31 74.02 29 5.29 No 4 0.01 No 0 0 No -21 0.7 Yes 49 56.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68909909 + NM_133509 RAD51B 0 . . . 0.75 80.62 20 5.37 No 76 -2.63 No 0 0 No -31 0.8 Yes 48 72.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41250881 - NM_007294 BRCA1 0 . . . 1.43 80.22 21 6.75 Yes 67 -4.96 No 0 0 No -20 0.55 No 47 38.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68799587 + NM_133509 RAD51B 0 . . . 5.52 70.01 23 4.9 No 51 0.45 No 0 0 No -22 0.64 No 47 68.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32975193 + NM_000059 BRCA2 0 . . . 0.83 73.61 15 4.58 No 10 1.08 Yes 0 0 No -52 0.45 No 48 92.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6016265 - NM_000535 PMS2 0 . . . 3.57 75.27 29 5.38 No 62 -1.69 No 0 0 No -28 0.93 Yes 51 69.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68634552 + NM_133509 RAD51B 0 . . . 3.48 0 28 5.83 Yes 68 1.67 Yes 0 0 No -21 0.65 No 37 65.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33436452 - NM_002878 RAD51D 0 . . . 1.76 70.29 23 4.97 No 75 -3.16 No 0 0 No -28 0.69 Yes 45 67.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69039227 + NM_133509 RAD51B 0 . . . 1.23 72.2 54 7.05 Yes 37 1.31 Yes 0 0 No -24 0.73 Yes 34 88.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89722969 + NM_000314 PTEN 0 . . . 8.29 83.48 16 4.64 No 39 1.23 Yes 0 0 No -21 0.65 No 43 93.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84390710 - NM_139076 FAM175A 0 . . . 0.69 74.23 93 7.19 Yes 8 1.53 Yes 0 0 No -32 0.6 No 50 83.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89648293 + NM_000314 PTEN 0 . . . 2.15 76.54 28 6.88 Yes 38 1.61 Yes 0 0 No -27 0.66 No 20 85.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47715781 + NM_000251 MSH2 0 . . . 6.1 78.64 21 6.2 Yes 41 0.28 No 0 0 No -20 0.83 Yes 44 71.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105191140 + NM_021930 RINT1 0 . . . 4.85 75.32 21 4.27 No 51 0.57 No 0 0 No -29 0.9 Yes 46 44.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75517935 - NM_001040108 MLH3 0 . . . 0.02 60.12 46 8.31 Yes 65 -4.34 No 0 0 No -45 0.67 Yes 21 15.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190683145 + NM_000534 PMS1 0 . . . 2.7 75.45 13 5.02 No 51 0.21 No 0 0 No -23 0.71 Yes 38 86.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47686615 + NM_000251 MSH2 0 . . . 0.06 68.68 40 5.72 Yes 57 -1.34 No 0 0 No -35 0.7 Yes 44 90.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131968817 + NM_005732 RAD50 0 . . . 3.01 0 15 5.54 No 34 0.51 No 0 0 No -25 0.68 Yes 21 72.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41258313 - NM_007294 BRCA1 0 . . . 2.41 78.8 11 5.66 Yes 17 0.52 No 0 0 No -26 0.61 No 45 72.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68833763 + NM_133509 RAD51B 0 . . . 6.51 91.57 19 5 No 3 1.29 Yes 0 0 No -24 0.5 No 48 65.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23627363 - NM_024675 PALB2 0 . . . 3.46 89.06 21 5.2 No 45 -2.87 No 0 0 No -21 0.67 Yes 47 61.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042848 - NM_000535 PMS2 0 . . . 8.31 93.61 35 7.27 Yes 9 1.15 Yes 0 0 No -34 0.85 Yes 49 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131977443 + NM_005732 RAD50 0 . . . 6.69 74.73 20 6.98 Yes -4 0.64 No 0 0 No -27 0.54 No 39 77.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131952588 + NM_005732 RAD50 0 . . . 0.77 0 21 4.69 No 76 0.72 No 0 0 No -20 0.47 No 12 28.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59882464 - NM_032043 BRIP1 0 . . . 4.76 66.95 34 6 Yes 37 0.52 No 0 0 No -33 0.32 No 42 73.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215631133 - NM_000465 BARD1 0 . . . 6.73 72.46 19 7.07 Yes 46 0.56 No 0 0 No -18 0.63 No 39 68.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68592057 + NM_133509 RAD51B 0 . . . 7.6 79.95 31 4.66 No 42 0.99 Yes 0 0 No -26 0.73 Yes 50 64.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29084650 - NM_001005735 CHEK2 0 . . . 2.44 0 27 5.2 No 48 1.02 Yes 0 0 No -56 0.66 No 32 78.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47665468 + NM_000251 MSH2 0 . . . 6.16 82.4 40 6.36 Yes 8 1.99 Yes 0 0 No -31 0.58 No 50 90.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68746382 + NM_133509 RAD51B 0 . . . 0.62 60.46 27 6.59 Yes 63 -5.8 No 0 0 No -26 0.8 Yes 35 83.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47789560 + NM_000251 MSH2 0 . . . 3.62 81.61 25 5.39 No 0 0.53 No 0 0 No -22 0.75 Yes 51 47.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84392136 - NM_139076 FAM175A 0 . . . 4.21 78.11 17 4.58 No 11 0.76 No 0 0 No -16 0.87 Yes 47 70.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69142140 + NM_133509 RAD51B 0 . . . 7.8 85.82 34 5.91 Yes 57 -4.42 No 0 0 No -33 0.7 Yes 47 48.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68869182 + NM_004360 CDH1 0 . . . 2.71 73.58 32 4.61 No 33 0.09 No 0 0 No -28 0.81 Yes 18 21.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131974466 + NM_005732 RAD50 0 . . . 5.33 85.66 15 5.74 Yes 71 -6.29 No 0 0 No -26 0.28 No 41 39.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131979298 + NM_005732 RAD50 0 . . . 1.53 69.82 9 3.41 No 29 0.65 No 0 0 No -30 0.69 Yes 46 52.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48032526 + NM_000179 MSH6 0 . . . 4.16 78.52 35 6.07 Yes 30 1.05 Yes 0 0 No -34 0.85 Yes 28 74.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68822318 + NM_004360 CDH1 0 . . . 1.08 65.23 31 5.83 Yes 61 0.03 No 0 0 No -30 0.91 Yes 48 31.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68703528 + NM_133509 RAD51B 0 . . . 3.03 77.55 57 6.04 Yes 74 1.77 Yes 0 0 No -42 0.4 No 44 53.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59805023 - NM_032043 BRIP1 0 . . . 2.74 74.34 17 4.18 No 3 0.79 Yes 0 0 No -19 0.45 No 50 81.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45798889 - NM_001048171 MUTYH 0 . . . 2.59 67.19 18 4.71 No 40 0.23 No 0 0 No -57 0.51 No 40 39.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215660254 - NM_000465 BARD1 0 . . . 6.79 80.56 27 5.2 No 19 0.93 Yes 0 0 No -26 0.75 Yes 39 61.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68939417 + NM_133509 RAD51B 0 . . . 2.57 0 29 4.82 No 44 -2.71 No 0 0 No -28 0.47 No 36 66.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68890751 + NM_133509 RAD51B 0 . . . 2.57 74.8 22 4.25 No 13 0.25 No 0 0 No -21 0.66 No 45 95.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59840624 - NM_032043 BRIP1 0 . . . 5.29 87.32 72 8.6 Yes -4 1.32 Yes 0 0 No -67 0.1 No 38 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68401965 + NM_133509 RAD51B 0 . . . 2.35 72.44 18 6.16 Yes 42 0.28 No 0 0 No -20 0.44 No 47 81.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131901311 + NM_005732 RAD50 0 . . . 8.57 80.04 14 5.29 No 62 1.09 Yes 0 0 No -21 0.76 Yes 43 75.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6025316 - NM_000535 PMS2 0 . . . 0.72 74.68 33 5.96 Yes 64 1.12 Yes 0 0 No -33 0.87 Yes 36 49.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69149920 + NM_133509 RAD51B 0 . . . 7.07 78.66 39 6.16 Yes 3 0.13 No 0 0 No -38 0.47 No 43 95.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68316793 + NM_133509 RAD51B 0 . . . 5.73 72.98 28 5.37 No 34 1.49 Yes 0 0 No -27 0.63 No 48 67.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108109646 + NM_000051 ATM 0 . . . 8.97 84.05 13 6 Yes 12 0.97 Yes 0 0 No -52 0.63 No 46 56.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131967048 + NM_005732 RAD50 0 . . . 0.05 68.8 17 4.35 No -4 1.18 Yes 0 0 No -25 0.47 No 55 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68653856 + NM_133509 RAD51B 0 . . . 2.89 74.15 16 4.69 No -3 0.42 No 0 0 No -19 0.85 Yes 45 27.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885768 - NM_032043 BRIP1 0 . . . 1.57 76.41 16 4.88 No 41 0.31 No 0 0 No -29 0.67 Yes 50 45.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21976090 - NM_000077 CDKN2A 0 . . . 4.59 70.62 26 5.78 Yes 65 1.56 Yes 0 0 No -30 0.87 Yes 47 81.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90969752 - NM_002485 NBN 0 . . . 4.1 75.71 32 5.66 Yes 4 0.23 No 0 0 No -53 0.43 No 49 83.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68954650 + NM_133509 RAD51B 0 . . . 10.1 91.82 40 6.78 Yes 4 1.4 Yes 0 0 No -25 0.79 Yes 42 49.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69023457 + NM_133509 RAD51B 0 . . . 1.35 70.7 22 5.91 Yes 60 -2.97 No 0 0 No -24 0.36 No 43 59.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68921444 + NM_133509 RAD51B 0 . . . 4.2 70.76 28 5.47 No 53 0.63 No 0 0 No -32 0.5 No 48 62.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56809374 + NM_058216 RAD51C 0 . . . 2.06 79.17 13 4.36 No 61 0.59 No 0 0 No -17 0.56 No 39 42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68675495 + NM_133509 RAD51B 0 . . . 3.05 74.4 19 3.47 No 31 1.26 Yes 0 0 No -18 0.96 Yes 38 38.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48019823 + NM_000179 MSH6 0 . . . 8.8 83.96 21 5 No 50 -0.91 No 0 0 No -20 0.68 Yes 48 84.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41236094 - NM_007294 BRCA1 0 . . . 1.27 76.63 22 4.2 No 67 -4.96 No 0 0 No -25 0.51 No 43 59.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68357700 + NM_133509 RAD51B 0 . . . 0.97 64.22 23 5.38 No 30 -4.04 No 0 0 No -22 0.65 No 44 35.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68858245 + NM_004360 CDH1 0 . . . 2.58 77.97 28 5 No -3 0.83 Yes 0 0 No -27 0.35 No 40 77.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68948186 + NM_133509 RAD51B 0 . . . 0.66 62.04 32 5.6 Yes 58 0.35 No 0 0 No -31 0.53 No 48 42.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23646189 - NM_024675 PALB2 0 . . . 0.04 75.54 10 5.1 No 48 0.07 No 0 0 No -21 0.37 No 46 71.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47661836 + NM_000251 MSH2 0 . . . 2.66 68.82 36 9.78 Yes 8 0.88 Yes 0 0 No -35 0.29 No 42 72.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68986867 + NM_133509 RAD51B 0 . . . 3.63 75.08 33 4.17 No 46 -2.92 No 0 0 No -27 0.36 No 52 43.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131975016 + NM_005732 RAD50 0 . . . 4.15 80.22 35 5.99 Yes 58 -3.88 No 0 0 No -30 0.7 Yes 43 54.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59893986 - NM_032043 BRIP1 0 . . . 4.67 85.89 22 6 Yes 69 1.38 Yes 0 0 No -21 0.85 Yes 46 67.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68714001 + NM_133509 RAD51B 0 . . . 5.43 79.16 26 5.39 No -4 0.29 No 0 0 No -25 0.51 No 38 69.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41222489 - NM_007294 BRCA1 0 . . . 2.94 70.84 55 7.22 Yes 67 -3.02 No 0 0 No -29 0.69 Yes 42 72.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47697707 + NM_000251 MSH2 0 . . . 4.61 82.31 20 7.12 Yes 58 1.16 Yes 0 0 No -19 0.81 Yes 43 50.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47803839 + NM_000251 MSH2 0 . . . 1.13 73.53 16 5.06 No 73 -3.44 No 0 0 No -22 0.48 No 50 42.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69080354 + NM_133509 RAD51B 0 . . . 3.95 85.02 29 5.92 Yes 73 0.87 Yes 0 0 No -28 0.7 Yes 51 61.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105193382 + NM_021930 RINT1 0 . . . 3.15 68.34 16 3.92 No 21 1.71 Yes 0 0 No -22 0.83 Yes 37 73.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68785153 + NM_133509 RAD51B 0 . . . 5.68 73.27 24 6.99 Yes 76 -3.61 No 0 0 No -23 0.81 Yes 51 63.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68452212 + NM_133509 RAD51B 0 . . . 2.55 74.28 26 5.1 No 43 1.01 Yes 0 0 No -25 0.65 No 32 59.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94216841 - NM_005591 MRE11 0 . . . 0.22 68.19 24 6.45 Yes 75 0.24 No 0 0 No -23 0.6 No 44 60.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108133339 + NM_000051 ATM 0 . . . 0.7 75.9 17 5.18 No 3 0.25 No 0 0 No -26 0.72 Yes 47 48.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68935309 + NM_133509 RAD51B 0 . . . 0.55 72.54 22 5.1 No 13 -1.74 No 0 0 No -22 0.37 No 10 30.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131923203 + NM_005732 RAD50 0 . . . 4.88 86.14 29 5.66 Yes 7 0.7 No 0 0 No -28 0.4 No 51 74.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47666469 + NM_000251 MSH2 0 . . . 0.56 48.41 15 4.95 No 24 1.19 Yes 0 0 No -22 0.76 Yes 34 72.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59869489 - NM_032043 BRIP1 0 . . . 2.11 64.5 19 8.5 Yes 57 -3.81 No 0 0 No -30 0.51 No 45 60.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47644694 + NM_000251 MSH2 0 . . . 1.87 68.21 26 5.09 No 28 1.1 Yes 0 0 No -25 0.92 Yes 30 71.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68934588 + NM_133509 RAD51B 0 . . . 2.98 87.3 27 4.22 No 58 0.13 No 0 0 No -26 0.73 Yes 48 58.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190663848 + NM_000534 PMS1 0 . . . 2.06 88.13 51 5.14 No 70 0.95 Yes 0 0 No -24 0.62 No 46 75.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59916953 - NM_032043 BRIP1 0 . . . 0.57 83.14 14 4.54 No 4 1.03 Yes 0 0 No -24 0.44 No 48 85.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59883752 - NM_032043 BRIP1 0 . . . 6.15 82.72 21 5 No 5 1.08 Yes 0 0 No -20 0.91 Yes 23 40.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68377954 + NM_133509 RAD51B 0 . . . 4.69 79.52 22 4.91 No 10 0.51 No 0 0 No -21 0.82 Yes 48 82.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131934457 + NM_005732 RAD50 0 . . . 2.85 70.14 28 5.38 No 5 0.13 No 0 0 No -27 0.5 No 53 73.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68735789 + NM_133509 RAD51B 0 . . . 4.94 72.23 46 8.46 Yes 61 0.18 No 0 0 No -45 0.89 Yes 35 68.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152360208 - NM_005431 XRCC2 0 . . . 3.93 73.71 17 4.58 No 49 1.2 Yes 0 0 No -26 0.61 No 17 53.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68320525 + NM_133509 RAD51B 0 . . . 2.5 84.54 15 4.58 No 26 0.25 No 0 0 No -19 0.45 No 42 63.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32895033 + NM_000059 BRCA2 0 . . . 0.43 74.03 18 5.39 No 46 0.93 Yes 0 0 No -17 0.54 No 62 67.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190660397 + NM_000534 PMS1 0 . . . 1.04 69.7 19 4.99 No 8 0.78 Yes 0 0 No -25 0.54 No 41 75.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68936901 + NM_133509 RAD51B 0 . . . 1.97 76.56 32 5.74 Yes 58 -3.55 No 0 0 No -31 0.41 No 47 75.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105175938 + NM_021930 RINT1 0 . . . 3.45 68.34 26 5.33 No 21 1.71 Yes 0 0 No -26 0.82 Yes 37 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68743295 + NM_133509 RAD51B 0 . . . 2.48 0 28 5.38 No 44 0.73 No 0 0 No -27 0.56 No 35 94.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37066619 + NM_000249 MLH1 0 . . . 1.16 60.77 21 7.87 Yes 56 0.52 No 0 0 No -20 0.51 No 41 38.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215657601 - NM_000465 BARD1 0 . . . 2.58 78.24 16 5.04 No 72 1.08 Yes 0 0 No -45 0.55 No 51 65.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68828671 + NM_004360 CDH1 0 . . . 0.41 63.93 34 6.8 Yes 73 2.06 Yes 0 0 No -33 0.74 Yes 43 47.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89657718 + NM_000314 PTEN 0 . . . 6.68 80.88 26 5.66 Yes 19 1.75 Yes 0 0 No -25 0.87 Yes 39 76.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32929648 + NM_000059 BRCA2 0 . . . 0.5 62.03 22 5.47 No 49 1.65 Yes 0 0 No -21 0.66 No 20 21.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23650251 - NM_024675 PALB2 0 . . . 8.21 75.61 15 4.58 No 18 1.17 Yes 0 0 No -54 0.55 No 40 94.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68463097 + NM_133509 RAD51B 0 . . . 2.68 78.02 35 5.99 Yes 58 -5.49 No 0 0 No -21 0.61 No 43 67.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94151070 - NM_005591 MRE11 0 . . . 1.38 59.65 23 6.08 Yes 32 0.46 No 0 0 No -28 0.78 Yes 26 72.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59861589 - NM_032043 BRIP1 0 . . . 4.63 69.6 15 5.39 No 55 0.6 No 0 0 No -22 0.75 Yes 44 57.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190701578 + NM_000534 PMS1 0 . . . 3.91 0 19 4.69 No 9 0.67 No 0 0 No -18 0.9 Yes 49 80.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41009270 + NM_001164269 RAD51 0 . . . 1.07 67.53 12 5.39 No 35 -3.8 No 0 0 No -26 0.26 No 43 21.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41265521 - NM_007294 BRCA1 0 . . . 3.53 65.78 27 5.2 No 73 -2.51 No 0 0 No -26 0.51 No 43 56.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69125393 + NM_133509 RAD51B 0 . . . 0.05 0 27 6.31 Yes 63 0.32 No 0 0 No -26 0.57 No 50 83.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90980226 - NM_002485 NBN 0 . . . 0.82 74.13 27 5.38 No 27 0.75 No 0 0 No -26 0.49 No 54 40.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68732652 + NM_133509 RAD51B 0 . . . 0.62 63.38 17 4.27 No 23 0.04 No 0 0 No -23 0.53 No 44 58.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68443358 + NM_133509 RAD51B 0 . . . 0.58 71.72 16 5.23 No 67 -5.29 No 0 0 No -27 0.36 No 54 16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105181497 + NM_021930 RINT1 0 . . . 3.99 78.51 27 5.55 No 41 1.29 Yes 0 0 No -26 0.74 Yes 17 89.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75499283 - NM_001040108 MLH3 0 . . . 0.86 68.34 23 4.88 No 73 -3.56 No 0 0 No -22 0.91 Yes 43 39.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59836042 - NM_032043 BRIP1 0 . . . 6.85 73.12 28 5.38 No 23 1.14 Yes 0 0 No -27 0.51 No 51 80.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37070697 + NM_000249 MLH1 0 . . . 6.47 77.83 33 6.24 Yes 74 0.78 Yes 0 0 No -38 0.51 No 49 55.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84406325 - NM_139076 FAM175A 0 . . . 2.94 72.94 28 5.38 No 43 1.34 Yes 0 0 No -27 0.48 No 15 33.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190743661 + NM_000534 PMS1 0 . . . 6.24 84.08 21 4.8 No 8 1.38 Yes 0 0 No -20 0.91 Yes 40 80.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90971745 - NM_002485 NBN 0 . . . 1.19 81.72 12 3.87 No 3 0.82 Yes 0 0 No -36 0.75 Yes 50 90.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131910555 + NM_005732 RAD50 0 . . . 3.28 79.82 22 5.51 No 1 0.76 No 0 0 No -21 0.44 No 48 81.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59847068 - NM_032043 BRIP1 0 . . . 3.25 0 18 3.52 No 2 1.55 Yes 0 0 No -36 0.75 Yes 56 57.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68888481 + NM_133509 RAD51B 0 . . . 1 66.82 40 7.45 Yes 24 1.07 Yes 0 0 No -31 0.4 No 34 68.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68851067 + NM_004360 CDH1 0 . . . 8.88 0 27 5.74 Yes 9 0.63 No 0 0 No -26 0.8 Yes 49 74.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47782629 + NM_000251 MSH2 0 . . . 2.78 79.36 19 4.68 No 12 0.7 No 0 0 No -18 0.78 Yes 46 77.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90981761 - NM_002485 NBN 0 . . . 7.61 78.6 17 4.8 No 34 0.65 No 0 0 No -16 0.46 No 36 91.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108122056 + NM_000051 ATM 0 . . . 4.85 72.1 41 6.54 Yes 40 1.11 Yes 0 0 No -37 0.57 No 39 37.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131966857 + NM_005732 RAD50 0 . . . 3.74 84.17 28 5.39 No 37 1.69 Yes 0 0 No -27 0.9 Yes 21 96.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69103771 + NM_133509 RAD51B 0 . . . 7.18 82.75 21 4.68 No 26 1.3 Yes 0 0 No -20 0.89 Yes 44 94.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41264463 - NM_007294 BRCA1 0 . . . 1.42 0 23 4.8 No 60 1.1 Yes 0 0 No -22 0.87 Yes 51 96.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68825868 + NM_004360 CDH1 0 . . . 4.72 90.11 23 4.62 No 75 -1.07 No 0 0 No -22 0.73 Yes 44 67.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47705921 + NM_000251 MSH2 0 . . . 4.52 87.46 15 4.92 No 42 0.48 No 0 0 No -27 0.24 No 46 61.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37071027 + NM_000249 MLH1 0 . . . 4.01 76.99 25 3.97 No 39 1.16 Yes 0 0 No -24 0.59 No 50 44.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59905322 - NM_032043 BRIP1 0 . . . 6.06 80.24 15 6.48 Yes 53 1.07 Yes 0 0 No -28 0.76 Yes 47 95.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90944818 - NM_002485 NBN 0 . . . 1.94 67.51 38 6.78 Yes 7 0.07 No 0 0 No -28 0.76 Yes 51 65.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68795280 + NM_133509 RAD51B 0 . . . 9.69 83.71 28 5.29 No 42 -1.98 No 0 0 No -27 0.44 No 43 51.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190680199 + NM_000534 PMS1 0 . . . 6.07 75.56 19 4.82 No 59 1.18 Yes 0 0 No -24 0.77 Yes 34 80.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68584580 + NM_133509 RAD51B 0 . . . 1.08 67.67 21 5.74 Yes 47 0.12 No 0 0 No -20 0.39 No 46 70.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89730216 + NM_000314 PTEN 0 . . . 3.57 67.36 32 5.52 No 55 0.6 No 0 0 No -21 0.33 No 49 59.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47637186 + NM_000251 MSH2 0 . . . 2.6 62.3 37 6.13 Yes 43 -2.62 No 0 0 No -36 0.71 Yes 28 84.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68615236 + NM_133509 RAD51B 0 . . . 5.13 84.12 79 8.78 Yes 46 0.5 No 0 0 No -26 0.34 No 39 59.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47745790 + NM_000251 MSH2 0 . . . 0.13 0 28 7.26 Yes NA NA NA 0 0 No -27 0.59 No 35 39.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190682626 + NM_000534 PMS1 0 . . . 6.42 79.8 23 5.37 No 51 -4.41 No 0 0 No -26 0.42 No 46 79.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68310318 + NM_133509 RAD51B 0 . . . 3.4 89.62 9 3.07 No 29 0.39 No 0 0 No -34 0.51 No 20 56.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47791754 + NM_000251 MSH2 0 . . . 5.19 82.33 21 5.2 No 28 0 No 0 0 No -17 0.4 No 44 71.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89721287 + NM_000314 PTEN 0 . . . 0.65 61.62 15 5.11 No 71 0.61 No 0 0 No -28 0.42 No 57 26.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23651135 - NM_024675 PALB2 0 . . . 1.6 0 30 8 Yes 74 -2.36 No 0 0 No -33 0.47 No 37 90.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215649696 - NM_000465 BARD1 0 . . . 5.18 78.28 26 6.47 Yes 38 -3.1 No 0 0 No -23 0.6 No 49 29.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215609660 - NM_000465 BARD1 0 . . . 0.92 61.95 36 9.65 Yes 27 0.79 Yes 0 0 No -35 0.87 Yes 53 54.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6049418 - NM_000535 PMS2 0 . . . 3.91 81.99 14 6.61 Yes 18 0.74 No 0 0 No -32 0.55 No 40 87.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190738816 + NM_000534 PMS1 0 . . . 0.78 70.97 19 4.92 No 10 0.37 No 0 0 No -22 0.66 Yes 47 63.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68427285 + NM_133509 RAD51B 0 . . . 1.85 0 27 5.28 No 47 -4.07 No 0 0 No -26 0.46 No 53 54.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68784636 + NM_004360 CDH1 0 . . . 3.12 0 34 4.87 No 44 0.14 No 0 0 No -33 0.29 No 28 71.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131893716 + NM_005732 RAD50 0 . . . 8.25 83.21 33 6.88 Yes 8 2.02 Yes 0 0 No -32 0.73 Yes 50 71.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32912605 + NM_000059 BRCA2 0 . . . 5.35 72.63 20 5.74 Yes 68 0.52 No 0 0 No -19 0.79 Yes 35 58.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94208891 - NM_005591 MRE11 0 . . . 2.05 64.38 13 5.2 No 70 0.94 Yes 0 0 No -24 0.53 No 44 46.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32944098 + NM_000059 BRCA2 0 . . . 5.14 77.42 26 5.06 No 9 0.28 No 0 0 No -25 0.55 No 46 66.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47739115 + NM_000251 MSH2 0 . . . 4.08 73.33 17 6.47 Yes 41 0.57 No 0 0 No -16 0.79 Yes 31 49.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59841204 - NM_032043 BRIP1 0 . . . 4.82 81.92 46 7.07 Yes 17 0.86 Yes 0 0 No -43 0.71 Yes 41 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68651440 + NM_133509 RAD51B 0 . . . 7.73 98.22 11 6.08 Yes 9 0.33 No 0 0 No -28 0.67 Yes 49 69.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84404480 - NM_139076 FAM175A 0 . . . 1.04 76.63 10 4 No 58 0.11 No 0 0 No -24 0.82 Yes 50 80.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40994546 + NM_001164269 RAD51 0 . . . 3.31 79.07 13 5.66 Yes 16 1.78 Yes 0 0 No -53 0.86 Yes 42 96.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69078333 + NM_133509 RAD51B 0 . . . 2.65 0 22 5.29 No 64 -4.38 No 0 0 No -21 0.85 Yes 49 58.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108158919 + NM_000051 ATM 0 . . . 7.14 83.14 19 5.43 No 37 1.16 Yes 0 0 No -26 0.42 No 46 77.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48021620 + NM_000179 MSH6 0 . . . 0.98 74.73 34 5.83 Yes 32 1.15 Yes 0 0 No -19 0.41 No 26 56.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59942393 - NM_032043 BRIP1 0 . . . 5.16 83.64 17 5.19 No 8 1.13 Yes 0 0 No -26 0.94 Yes 50 93.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89638130 + NM_000314 PTEN 0 . . . 2.71 72.78 18 5.74 Yes 56 1.68 Yes 0 0 No -26 0.6 No 47 87.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59762649 - NM_032043 BRIP1 0 . . . 3.98 76.92 17 6 Yes 25 0.42 No 0 0 No -29 0.46 No 35 44.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21990417 - NM_000077 CDKN2A 0 . . . 5.76 80.07 16 5.45 No 7 0.53 No 0 0 No -23 0.37 No 47 52.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68773579 + NM_133509 RAD51B 0 . . . 4.42 80.58 18 5.74 Yes 20 -2.61 No 0 0 No -26 0.53 No 43 79.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152354833 - NM_005431 XRCC2 0 . . . 3.36 77.57 27 4.85 No 44 0.91 Yes 0 0 No -27 0.72 Yes 46 65.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41002999 + NM_001164269 RAD51 0 . . . 9.11 86.43 33 5.92 Yes 75 1.88 Yes 0 0 No -29 0.63 No 40 69.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68367087 + NM_133509 RAD51B 0 . . . 4.03 76.9 22 4.62 No 68 -3.77 No 0 0 No -21 0.75 Yes 38 55.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69081774 + NM_133509 RAD51B 0 . . . 3.66 80.12 18 5.48 No 7 1.02 Yes 0 0 No -27 0.48 No 51 90.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89627675 + NM_000314 PTEN 0 . . . 5.35 73.89 13 4.9 No 13 0.88 Yes 0 0 No -19 0.42 No 45 75.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108192180 + NM_000051 ATM 0 . . . 4.06 78.95 27 6.04 Yes 5 0.86 Yes 0 0 No -31 0.79 Yes 44 73.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6032250 - NM_000535 PMS2 0 . . . 6.4 70.54 31 5.06 No 39 -4.23 No 0 0 No -30 0.43 No 40 74.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68900470 + NM_133509 RAD51B 0 . . . 4.67 72.99 50 7.41 Yes 14 0.98 Yes 0 0 No -49 0.88 Yes 39 71.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131961329 + NM_005732 RAD50 0 . . . 3.84 66.24 27 5.1 No 22 1.12 Yes 0 0 No -27 0.47 No 36 87.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68776662 + NM_004360 CDH1 0 . . . 3.7 73.86 46 5.51 No -2 0.63 No 0 0 No -45 0.52 No 48 78.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68386791 + NM_133509 RAD51B 0 . . . 5.34 0 49 8.49 Yes 5 0.41 No 0 0 No -48 0.68 Yes 53 64.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68774657 + NM_004360 CDH1 0 . . . 6.09 85.83 16 5.57 Yes 11 1.17 Yes 0 0 No -21 0.61 No 47 78.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94174025 - NM_005591 MRE11 0 . . . 6.67 82.01 36 6.91 Yes 75 1.24 Yes 0 0 No -14 0.33 No 53 64.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105179602 + NM_021930 RINT1 0 . . . 3.74 70.15 19 4.58 No 15 0.85 Yes 0 0 No -26 0.57 No 43 64.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68394538 + NM_133509 RAD51B 0 . . . 6.45 69.79 18 4.88 No 24 0.63 No 0 0 No -21 0.28 No 34 65.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215598276 - NM_000465 BARD1 0 . . . 7.38 75.87 22 4.45 No 8 0.86 Yes 0 0 No -21 0.87 Yes 50 65.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68903617 + NM_133509 RAD51B 0 . . . 0.23 0 15 5.1 No 40 1.12 Yes 0 0 No -21 0.73 Yes 52 94.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89657723 + NM_000314 PTEN 0 . . . 0.38 0 30 5.36 No 24 1.73 Yes 0 0 No -29 0.77 Yes 34 75.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59861148 - NM_032043 BRIP1 0 . . . 0.55 54.45 24 5.85 Yes 55 0.81 Yes 0 0 No -23 0.32 No 47 46.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47716864 + NM_000251 MSH2 0 . . . 2.98 72.47 17 5.49 No 76 -3.57 No 0 0 No -20 0.51 No 42 49.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215621407 - NM_000465 BARD1 0 . . . 0.22 0 16 3.62 No 9 0.56 No 0 0 No -23 0.45 No 49 65.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59843839 - NM_032043 BRIP1 0 . . . 3.13 72.9 28 6.09 Yes 0 0.71 No 0 0 No -28 0.62 No 20 86.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68468279 + NM_133509 RAD51B 0 . . . 0.91 0 28 7.2 Yes 39 1.1 Yes 0 0 No -27 0.77 Yes 36 60.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68525955 + NM_133509 RAD51B 0 . . . 1.34 62.4 21 4.12 No 27 1.11 Yes 0 0 No -20 0.82 Yes 45 79.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69108759 + NM_133509 RAD51B 0 . . . 0.48 68.85 13 3.43 No 25 1.37 Yes 0 0 No -18 0.31 No 33 59.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41199264 - NM_007294 BRCA1 0 . . . 1.62 67.07 17 5.29 No 13 -3.04 No 0 0 No -44 0.39 No 45 51.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215643013 - NM_000465 BARD1 0 . . . 6.73 73 16 4.69 No 69 0.47 No 0 0 No -19 0.77 Yes 18 68.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215651958 - NM_000465 BARD1 0 . . . 0.35 86.02 40 7.05 Yes 50 0.33 No 0 0 No -21 0.61 No 41 54.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69072522 + NM_133509 RAD51B 0 . . . 6.28 64.17 17 4.61 No 73 -3.93 No 0 0 No -26 0.61 No 47 62.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69134312 + NM_133509 RAD51B 0 . . . 5.11 67.93 15 5.2 No 46 -1.87 No 0 0 No -45 0.57 No 41 58.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84400530 - NM_139076 FAM175A 0 . . . 3.67 84 26 5.74 Yes 2 1.5 Yes 0 0 No -35 0.64 No 18 76.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215661483 - NM_000465 BARD1 0 . . . 6.86 85.02 18 4.62 No 31 1.06 Yes 0 0 No -23 0.5 No 45 67.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68509095 + NM_133509 RAD51B 0 . . . 5.05 86.55 27 6.4 Yes 51 0.42 No 0 0 No -26 0.82 Yes 42 47.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29125286 - NM_001005735 CHEK2 0 . . . 2.89 68.34 26 4.96 No 20 1.67 Yes 0 0 No -25 0.58 No 38 65.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59931720 - NM_032043 BRIP1 0 . . . 4.53 77.05 29 5.85 Yes 34 1.17 Yes 0 0 No -28 0.74 Yes 44 70.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108148702 + NM_000051 ATM 0 . . . 5.72 80.21 18 4.89 No 32 0.57 No 0 0 No -17 0.52 No 26 65.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48013407 + NM_000179 MSH6 0 . . . 0.08 66.12 30 5.83 Yes 42 -3.74 No 0 0 No -29 0.76 Yes 47 61.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47787947 + NM_000251 MSH2 0 . . . 10.67 81.77 29 5.91 Yes -3 0.89 Yes 0 0 No -28 0.79 Yes 48 83.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29136198 - NM_001005735 CHEK2 0 . . . 1.02 0 25 4.71 No 61 0.58 No 0 0 No -24 0.6 No 40 54.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68430535 + NM_133509 RAD51B 0 . . . 2.87 57.29 29 5.55 No 19 0.86 Yes 0 0 No -28 0.92 Yes 45 54.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69058795 + NM_133509 RAD51B 0 . . . 3.21 86.33 24 4.86 No 49 1.35 Yes 0 0 No -23 0.54 No 55 40.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94185058 - NM_005591 MRE11 0 . . . 0.75 65.95 26 5.29 No 1 0.3 No 0 0 No -25 0.73 Yes 35 44.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108115342 + NM_000051 ATM 0 . . . 2.4 84.93 11 4.12 No 0 1.01 Yes 0 0 No -56 0.67 Yes 41 46.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47692175 + NM_000251 MSH2 0 . . . 8.09 80.78 20 5.57 Yes 12 0.32 No 0 0 No -19 0.52 No 45 83.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68740164 + NM_133509 RAD51B 0 . . . 5.11 71.92 13 4.04 No 10 0.44 No 0 0 No -19 0.27 No 48 47.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190677076 + NM_000534 PMS1 0 . . . 1.74 75.74 17 4.8 No 50 -4.46 No 0 0 No -24 0.81 Yes 50 70.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68890892 + NM_133509 RAD51B 0 . . . 3.63 69.08 29 6.59 Yes 75 1.9 Yes 0 0 No -28 0.75 Yes 41 59.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47757867 + NM_000251 MSH2 0 . . . 0.11 0 25 6.32 Yes 4 1.03 Yes 0 0 No -27 0.41 No 54 47.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68751119 + NM_133509 RAD51B 0 . . . 2 75.46 37 6.86 Yes 41 0.3 No 0 0 No -23 0.71 Yes 49 79.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7592280 - NM_000546 TP53 0 . . . 11.01 94.93 24 5.97 Yes 17 -0.55 No 0 0 No -23 0.92 Yes 41 88.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59787543 - NM_032043 BRIP1 0 . . . 4.89 78.06 40 5.96 Yes 3 0.08 No 0 0 No -27 0.64 No 48 55.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648999 - NM_024675 PALB2 0 . . . 6.55 93.7 20 3.88 No 4 1.57 Yes 0 0 No -28 0.64 No 16 47.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45793586 - NM_001048171 MUTYH 0 . . . 3.63 81.67 61 6.16 Yes 15 -2.8 No 0 0 No -25 0.77 Yes 59 28.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75509525 - NM_001040108 MLH3 0 . . . 2.93 77.69 14 6.99 Yes 58 -3.88 No 0 0 No -38 0.55 No 53 50.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68407381 + NM_133509 RAD51B 0 . . . 4.73 82.4 33 5.92 Yes 49 -1.16 No 0 0 No -32 0.38 No 52 67.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29083180 - NM_001005735 CHEK2 0 . . . 3.55 77.46 19 4.41 No 69 -4.74 No 0 0 No -22 0.38 No 47 20.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37034172 + NM_000249 MLH1 0 . . . 3.13 68.13 25 4.83 No 56 0.32 No 0 0 No -25 0.93 Yes 56 43.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21975536 - NM_000077 CDKN2A 0 . . . 2.47 71.65 38 5.92 Yes 70 0.21 No 0 0 No -21 0.35 No 58 26.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6034214 - NM_000535 PMS2 0 . . . 2.39 77.51 25 5.48 No 33 0.69 No 0 0 No -24 0.75 Yes 25 84.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68727601 + NM_133509 RAD51B 0 . . . 4.96 75.22 17 5.57 Yes 54 0.94 Yes 0 0 No -24 0.68 Yes 38 93.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68695245 + NM_133509 RAD51B 0 . . . 2.76 74.05 22 5.31 No 5 0.19 No 0 0 No -21 0.55 No 53 80.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68777079 + NM_004360 CDH1 0 . . . 6.98 79.93 34 6.71 Yes 19 1.87 Yes 0 0 No -33 0.87 Yes 39 97.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105196889 + NM_021930 RINT1 0 . . . 3.6 82.05 25 5.52 No 63 1.34 Yes 0 0 No -25 0.86 Yes 27 61.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32917412 + NM_000059 BRCA2 0 . . . 2.97 69.25 13 4.87 No 2 0.43 No 0 0 No -37 0.47 No 42 62.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68664785 + NM_133509 RAD51B 0 . . . 1.54 78.19 14 4.36 No 27 0.44 No 0 0 No -42 0.72 Yes 39 88.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190735429 + NM_000534 PMS1 0 . . . 0.6 66.51 27 5.74 Yes 3 0.08 No 0 0 No -26 0.94 Yes 37 43.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460686 + NM_133509 RAD51B 0 . . . 0.69 65.53 31 5.66 Yes 54 1.05 Yes 0 0 No -27 0.37 No 47 63.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68477516 + NM_133509 RAD51B 0 . . . 7.05 69.32 22 6.85 Yes 72 -4 No 0 0 No -21 0.96 Yes 48 62.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68837123 + NM_133509 RAD51B 0 . . . 0.18 57.04 25 6.21 Yes 59 1.2 Yes 0 0 No -32 0.76 Yes 42 54.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84388380 - NM_139076 FAM175A 0 . . . 2.95 0 20 4.2 No 28 0.26 No 0 0 No -19 0.31 No 30 93.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68817604 + NM_004360 CDH1 0 . . . 0.99 0 21 5.09 No 22 1.58 Yes 0 0 No -20 0.47 No 36 96.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84405690 - NM_139076 FAM175A 0 . . . 3.86 73.26 22 5.32 No 27 -0.7 No 0 0 No -29 0.76 Yes 40 51.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29094301 - NM_001005735 CHEK2 0 . . . 1.75 63.9 25 4.93 No 57 1.4 Yes 0 0 No -24 0.39 No 44 81.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89660719 + NM_000314 PTEN 0 . . . 5.68 67.45 23 5.83 Yes 26 0.5 No 0 0 No -22 0.61 No 32 79.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59927510 - NM_032043 BRIP1 0 . . . 2.38 80.22 19 4.63 No 67 -4.96 No 0 0 No -32 0.7 Yes 48 56.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47790406 + NM_000251 MSH2 0 . . . 10.04 73 20 5.1 No 49 1.33 Yes 0 0 No -19 0.42 No 48 82.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75505395 - NM_001040108 MLH3 0 . . . 1.47 71.72 15 5.28 No 31 0.5 No 0 0 No -25 0.42 No 42 90.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68378287 + NM_133509 RAD51B 0 . . . 4.56 72.05 23 4.28 No -2 0.02 No 0 0 No -45 0.45 No 44 55.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69108281 + NM_133509 RAD51B 0 . . . 3.95 76.57 31 5.66 Yes -3 0.68 No 0 0 No -30 0.77 Yes 38 84.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108178991 + NM_000051 ATM 0 . . . 6.52 79.57 21 5.05 No 50 1.38 Yes 0 0 No -45 0.45 No 49 58.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68807601 + NM_004360 CDH1 0 . . . 6.39 84.09 21 5.66 Yes 11 1.48 Yes 0 0 No -20 0.78 Yes 47 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190678943 + NM_000534 PMS1 0 . . . 6.78 71.66 26 5.07 No -2 0.63 No 0 0 No -25 0.51 No 40 81.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29124178 - NM_001005735 CHEK2 0 . . . 2.53 0 28 6.21 Yes 45 1.06 Yes 0 0 No -27 0.77 Yes 28 89.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89723789 + NM_000314 PTEN 0 . . . 5 73.65 31 7.87 Yes 55 1.13 Yes 0 0 No -30 0.93 Yes 41 83.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68461548 + NM_133509 RAD51B 0 . . . 2.86 77.46 22 5.26 No 1 1.32 Yes 0 0 No -25 0.71 Yes 51 38.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68511659 + NM_133509 RAD51B 0 . . . 6.89 77.95 20 5.17 No 70 0.98 Yes 0 0 No -26 0.75 Yes 53 69.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68685698 + NM_133509 RAD51B 0 . . . 0.64 72.86 21 4.58 No 65 -4.6 No 0 0 No -20 0.89 Yes 44 85.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68424920 + NM_133509 RAD51B 0 . . . 6.37 73.48 17 4.8 No 56 0.24 No 0 0 No -32 0.68 Yes 46 77.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68962601 + NM_133509 RAD51B 0 . . . 2.45 74.92 21 5.97 Yes 14 0.68 No 0 0 No -20 0.7 Yes 50 84.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59937646 - NM_032043 BRIP1 0 . . . 1.1 74.92 25 4.7 No 57 -2.37 No 0 0 No -24 0.96 Yes 46 87.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7574224 - NM_000546 TP53 0 . . . 1.22 68.7 35 7.74 Yes 70 -3.09 No 0 0 No -34 0.81 Yes 43 73.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59871839 - NM_032043 BRIP1 0 . . . 6.94 73.87 24 4.49 No 73 1.55 Yes 0 0 No -23 0.88 Yes 51 65.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68714498 + NM_133509 RAD51B 0 . . . 3.7 72.33 26 5.13 No 10 0.6 No 0 0 No -25 0.67 Yes 43 66.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21992057 - NM_000077 CDKN2A 0 . . . 2.48 77.58 21 4.8 No 42 0.94 Yes 0 0 No -27 0.67 Yes 45 51.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131915988 + NM_005732 RAD50 0 . . . 6.22 71.58 50 6.8 Yes 22 0.53 No 0 0 No -24 0.65 No 40 41.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274599 - NM_007294 BRCA1 0 . . . 9.64 93.11 15 5.39 No 11 0.3 No 0 0 No -26 0.22 No 43 68.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68950028 + NM_133509 RAD51B 0 . . . 8.98 85.9 18 4.8 No 13 0.68 No 0 0 No -23 0.77 Yes 45 96.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89644012 + NM_000314 PTEN 0 . . . 2.86 81.12 13 5.72 Yes 32 0.17 No 0 0 No -23 0.88 Yes 43 72.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190721108 + NM_000534 PMS1 0 . . . 1.64 73.97 39 4.3 No 61 1.3 Yes 0 0 No -30 0.67 Yes 49 50.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68950711 + NM_133509 RAD51B 0 . . . 3.14 72.82 33 4.17 No 40 0.65 No 0 0 No -32 0.43 No 44 56.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68553109 + NM_133509 RAD51B 0 . . . 4.9 76.59 48 5.39 No 38 0.26 No 0 0 No -27 0.69 Yes 49 70.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37084968 + NM_000249 MLH1 0 . . . 6.24 82.31 43 6.09 Yes 62 1.05 Yes 0 0 No -37 0.86 Yes 55 56.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68300762 + NM_133509 RAD51B 0 . . . 6.65 90.69 48 5.45 No 73 0.19 No 0 0 No -25 0.18 No 50 50.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68847617 + NM_004360 CDH1 0 . . . 0.09 74.68 20 4.84 No 4 0.41 No 0 0 No -22 0.47 No 54 86.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68731921 + NM_133509 RAD51B 0 . . . 2.47 68.87 28 6.16 Yes 75 -5.13 No 0 0 No -27 0.77 Yes 44 55.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190717103 + NM_000534 PMS1 0 . . . 6.22 75.55 15 6.16 Yes 10 0.59 No 0 0 No -21 0.81 Yes 48 45.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108153653 + NM_000051 ATM 0 . . . 2.95 61.45 9 4.9 No 68 -2.82 No 0 0 No -51 0.42 No 38 49.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68791417 + NM_004360 CDH1 0 . . . 1.45 54.01 24 5.48 No 31 1.72 Yes 0 0 No -23 0.86 Yes 11 66.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1211905 + NM_000455 STK11 0 . . . 4.78 93.13 17 6.08 Yes 72 -3.63 No 0 0 No -26 0.33 No 46 88.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68899393 + NM_133509 RAD51B 0 . . . 3.22 83.51 31 5.99 Yes 33 0.41 No 0 0 No -30 0.74 Yes 44 37.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59903642 - NM_032043 BRIP1 0 . . . 1.15 0 71 8.72 Yes 52 0.12 No 0 0 No -27 0.64 No 38 58.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68920618 + NM_133509 RAD51B 0 . . . 0.69 70.89 25 6.41 Yes 74 0.88 Yes 0 0 No -24 0.96 Yes 42 76.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59801178 - NM_032043 BRIP1 0 . . . 2.1 61.27 35 6.4 Yes 62 0.14 No 0 0 No -34 0.84 Yes 46 48.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68397824 + NM_133509 RAD51B 0 . . . 6.8 80.12 19 4.69 No 9 1.28 Yes 0 0 No -18 0.93 Yes 49 91.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59810343 - NM_032043 BRIP1 0 . . . 2.94 67.88 18 6.48 Yes 28 0.67 No 0 0 No -17 0.54 No 53 51.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849320 - NM_032043 BRIP1 0 . . . 1.04 82.47 33 6.24 Yes 75 1.66 Yes 0 0 No -32 0.72 Yes 43 54.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59907788 - NM_032043 BRIP1 0 . . . 7.63 78.87 19 6.32 Yes 61 0.7 No 0 0 No -24 0.35 No 24 76.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23623991 - NM_024675 PALB2 0 . . . 0.65 69.34 27 6.05 Yes 32 -2.86 No 0 0 No -33 0.67 Yes 48 48.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68500118 + NM_133509 RAD51B 0 . . . 7.94 94.94 34 4.3 No 23 1.11 Yes 0 0 No -33 0.61 No 35 84.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68557533 + NM_133509 RAD51B 0 . . . 4.87 70.41 29 5.6 Yes 1 1.35 Yes 0 0 No -36 0.7 Yes 49 85.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68744852 + NM_133509 RAD51B 0 . . . 7.68 70.76 26 7.02 Yes NA NA NA 0 0 No -25 0.49 No 33 59.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6045101 - NM_000535 PMS2 0 . . . 0.09 74.68 27 5.44 No 51 0.48 No 0 0 No -26 0.93 Yes 54 81.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68455971 + NM_133509 RAD51B 0 . . . 0.67 61.2 36 7.08 Yes 38 0.78 Yes 0 0 No -35 0.61 No 14 64.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94178086 - NM_005591 MRE11 0 . . . 6.43 83.54 19 5 No 6 1.22 Yes 0 0 No -18 0.87 Yes 52 47.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215641703 - NM_000465 BARD1 0 . . . 7.37 83.72 28 5.66 Yes 33 0.48 No 0 0 No -27 0.88 Yes 43 72.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32961445 + NM_000059 BRCA2 0 . . . 2.3 67.19 70 6.86 Yes -4 0.03 No 0 0 No -25 0.77 Yes 45 59.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89727216 + NM_000314 PTEN 0 . . . 1.12 67.99 30 5.57 Yes 55 0.19 No 0 0 No -29 0.8 Yes 40 89.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90963744 - NM_002485 NBN 0 . . . 0.2 0 14 5.39 No 42 0.21 No 0 0 No -22 0.75 Yes 49 67.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68915833 + NM_133509 RAD51B 0 . . . 2.91 76.9 19 5.69 Yes 32 2.24 Yes 0 0 No -26 0.61 No 53 48.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47740252 + NM_000251 MSH2 0 . . . 3.71 73.8 25 5.19 No -3 0.8 Yes 0 0 No -24 0.82 Yes 42 93.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68393784 + NM_133509 RAD51B 0 . . . 4.16 79.72 12 5.39 No 31 0.62 No 0 0 No -26 0.3 No 46 74.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41220320 - NM_007294 BRCA1 0 . . . 0.96 74.81 16 5.97 Yes 24 1.07 Yes 0 0 No -19 0.32 No 42 70.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7584536 - NM_000546 TP53 0 . . . 4.82 80.22 16 6.58 Yes 15 0.36 No 0 0 No -24 0.42 No 43 50.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21966854 - NM_000077 CDKN2A 0 . . . 5.73 85.13 12 5.51 No 49 1.58 Yes 0 0 No -25 0.71 Yes 32 62.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68430038 + NM_133509 RAD51B 0 . . . 7.86 80.85 16 4.66 No 55 0.69 No 0 0 No -21 0.42 No 48 83.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68688134 + NM_133509 RAD51B 0 . . . 0.34 65.4 34 5.81 Yes 72 -5.78 No 0 0 No -54 0.28 No 46 89.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75500281 - NM_001040108 MLH3 0 . . . 0.55 0 29 5.88 Yes 62 0.52 No 0 0 No -22 0.86 Yes 38 69.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48024163 + NM_000179 MSH6 0 . . . 3.05 69.75 28 5.38 No 55 -3.44 No 0 0 No -27 0.61 No 41 28.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68380393 + NM_133509 RAD51B 0 . . . 1.14 65.55 46 6.64 Yes 56 1.01 Yes 0 0 No -28 0.57 No 37 64.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89675518 + NM_000314 PTEN 0 . . . 1.01 68.33 16 5.29 No 18 0.11 No 0 0 No -55 0.33 No 40 24.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108226972 + NM_000051 ATM 0 . . . 2.02 80.37 25 7.02 Yes 20 0.7 No 0 0 No -24 0.88 Yes 38 46.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68485094 + NM_133509 RAD51B 0 . . . 1.4 0 16 5.8 Yes 59 0.88 Yes 0 0 No -19 0.28 No 50 63.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41197716 - NM_007294 BRCA1 0 . . . 5.15 74.29 18 6 Yes -3 0.36 No 0 0 No -31 0.45 No 50 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68654716 + NM_133509 RAD51B 0 . . . 2.24 80.12 17 7.17 Yes 7 1.02 Yes 0 0 No -26 0.68 Yes 51 76.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59907120 - NM_032043 BRIP1 0 . . . 3.77 75.71 18 4.42 No 72 1.22 Yes 0 0 No -17 0.41 No 28 76.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94174315 - NM_005591 MRE11 0 . . . 4.63 81.76 30 5.15 No 67 1 Yes 0 0 No -27 0.85 Yes 42 75.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68811396 + NM_004360 CDH1 0 . . . 0.87 68.37 29 5.38 No 38 1.28 Yes 0 0 No -28 0.72 Yes 20 51.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68683970 + NM_133509 RAD51B 0 . . . 6.85 83.19 15 4.52 No 45 -0.36 No 0 0 No -21 0.86 Yes 35 52.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47713260 + NM_000251 MSH2 0 . . . 1.73 59.97 27 6.32 Yes 53 -5.11 No 0 0 No -26 0.78 Yes 39 65.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29126600 - NM_001005735 CHEK2 0 . . . 2.89 68.34 17 6.42 Yes 13 0.97 Yes 0 0 No -16 0.68 Yes 45 80.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89696307 + NM_000314 PTEN 0 . . . 1.03 61.52 52 6.89 Yes 25 1.24 Yes 0 0 No -30 0.55 No 24 58.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68838754 + NM_004360 CDH1 0 . . . 0.3 84.41 23 5.29 No 23 1.11 Yes 0 0 No -22 0.6 No 35 71.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47716703 + NM_000251 MSH2 0 . . . 4.61 79.45 17 5.83 Yes 63 1.6 Yes 0 0 No -16 0.37 No 34 78.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68813235 + NM_004360 CDH1 0 . . . 0.02 79.97 10 5.29 No 49 1.7 Yes 0 0 No -31 0.55 No 9 17.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47790194 + NM_000251 MSH2 0 . . . 6.49 80.62 25 5.1 No 26 0.2 No 0 0 No -28 0.69 Yes 48 69.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7579788 - NM_000546 TP53 0 . . . 4.68 70.77 20 4.25 No 67 -3.8 No 0 0 No -24 0.33 No 48 59.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344760 + NM_133509 RAD51B 0 . . . 3.18 70.1 16 4.69 No 10 0.63 No 0 0 No -40 0.41 No 48 72.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41237294 - NM_007294 BRCA1 0 . . . 1.26 62.86 16 6.96 Yes 15 1.11 Yes 0 0 No -35 0.76 Yes 43 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90944207 - NM_002485 NBN 0 . . . 0.51 82.1 22 4.76 No 22 1.26 Yes 0 0 No -21 0.41 No 36 75.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32953158 + NM_000059 BRCA2 0 . . . 2.3 75.3 53 7.28 Yes 50 0.59 No 0 0 No -23 0.82 Yes 50 36.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75483550 - NM_001040108 MLH3 0 . . . 2.22 69.35 20 5.83 Yes 22 0.37 No 0 0 No -19 0.69 Yes 46 55.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68422752 + NM_133509 RAD51B 0 . . . 1.47 67.33 21 5 No 21 -1.73 No 0 0 No -20 0.61 No 50 65.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68850904 + NM_133509 RAD51B 0 . . . 7.39 84.81 25 5.38 No 21 0.62 No 0 0 No -22 0.71 Yes 43 80.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32890151 + NM_000059 BRCA2 0 . . . 0.41 67.14 40 8 Yes 75 0.79 Yes 0 0 No -39 0.75 Yes 44 67.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131913052 + NM_005732 RAD50 0 . . . 0.21 0 25 5.57 Yes 30 0.26 No 0 0 No -24 0.93 Yes 48 64.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41241879 - NM_007294 BRCA1 0 . . . 1.74 71.28 29 4.58 No 52 0.57 No 0 0 No -24 0.58 No 48 46.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68598299 + NM_133509 RAD51B 0 . . . 2.9 76.98 15 5.74 Yes 65 1.09 Yes 0 0 No -46 0.36 No 37 61.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59912233 - NM_032043 BRIP1 0 . . . 7.98 86.1 29 5.57 Yes 16 0.66 No 0 0 No -24 0.64 No 42 95.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41018243 + NM_001164269 RAD51 0 . . . 0.16 66.78 29 5.38 No 1 0.51 No 0 0 No -38 0.43 No 52 50.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68868779 + NM_133509 RAD51B 0 . . . 1.7 71.01 30 6.42 Yes 64 -5.15 No 0 0 No -29 0.84 Yes 15 28.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94183575 - NM_005591 MRE11 0 . . . 3.7 71.67 31 7 Yes 69 -5.42 No 0 0 No -34 0.63 No 54 37.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90988367 - NM_002485 NBN 0 . . . 3.17 71.42 25 4.13 No 61 -5.02 No 0 0 No -23 0.67 Yes 52 34.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69036066 + NM_133509 RAD51B 0 . . . 1.34 73.61 25 4.51 No 34 0.74 No 0 0 No -24 0.64 No 24 66.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32924188 + NM_000059 BRCA2 0 . . . 1.96 0 23 5.13 No 19 1.6 Yes 0 0 No -22 0.95 Yes 39 95.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47802956 + NM_000251 MSH2 0 . . . 6.98 70.77 17 4.58 No 10 0.97 Yes 0 0 No -22 0.72 Yes 48 82.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41211380 - NM_007294 BRCA1 0 . . . 2.56 87 35 7.91 Yes 32 1.47 Yes 0 0 No -34 0.9 Yes 50 62.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59776253 - NM_032043 BRIP1 0 . . . 3.7 69.9 33 6.74 Yes 17 0.44 No 0 0 No -32 0.9 Yes 41 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68946345 + NM_133509 RAD51B 0 . . . 0.36 61.65 24 5.32 No 29 1.99 Yes 0 0 No -23 0.75 Yes 29 66.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68550413 + NM_133509 RAD51B 0 . . . 6.28 79.13 18 4.69 No 67 -2.7 No 0 0 No -23 0.75 Yes 46 43.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94222582 - NM_005591 MRE11 0 . . . 5.97 68.43 29 5.66 Yes 20 0.27 No 0 0 No -28 0.8 Yes 47 54.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68855648 + NM_133509 RAD51B 0 . . . 0.92 73.43 12 4.9 No 63 -3.75 No 0 0 No -17 0.5 No 50 42.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90969014 - NM_002485 NBN 0 . . . 1.26 61.2 39 7.54 Yes 2 0.24 No 0 0 No -38 0.74 Yes 39 55.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190709341 + NM_000534 PMS1 0 . . . 0.38 76.63 36 5.77 Yes 58 -3.88 No 0 0 No -35 0.43 No 55 50.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47772124 + NM_000251 MSH2 0 . . . 2.15 77.46 27 6.51 Yes 19 0.93 Yes 0 0 No -26 0.73 Yes 39 89.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94156259 - NM_005591 MRE11 0 . . . 4.96 74.94 29 5.38 No 12 0.71 No 0 0 No -53 0.66 No 46 95.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59817670 - NM_032043 BRIP1 0 . . . 4.55 84.98 33 5.25 No 73 -4.66 No 0 0 No -32 0.66 Yes 44 63.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29129579 - NM_001005735 CHEK2 0 . . . 5.99 86.8 33 4.33 No 60 -0.91 No 0 0 No -26 0.48 No 51 41.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105174196 + NM_021930 RINT1 0 . . . 7.02 87.45 15 3.8 No 19 0.93 Yes 0 0 No -23 0.55 No 47 62.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89665279 + NM_000314 PTEN 0 . . . 7.3 90.91 43 6.48 Yes 60 0.53 No 0 0 No -18 0.41 No 44 52.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104182931 - NM_001100119 XRCC3 0 . . . 2.79 75.92 18 5.66 Yes 25 -1.13 No 0 0 No -17 0.69 Yes 48 33.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68708145 + NM_133509 RAD51B 0 . . . 2.21 74.78 15 4.93 No 62 0.82 Yes 0 0 No -21 0.32 No 36 69.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68895791 + NM_133509 RAD51B 0 . . . 5.54 73.92 31 5.74 Yes 27 0.78 Yes 0 0 No -30 0.69 Yes 46 78.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45793278 - NM_001048171 MUTYH 0 . . . 1.99 68.72 16 5.24 No 4 0.85 Yes 0 0 No -26 0.89 Yes 45 39.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68846068 + NM_004360 CDH1 0 . . . 1.25 66.45 21 4.3 No 45 1.44 Yes 0 0 No -20 0.49 No 13 71.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131930857 + NM_005732 RAD50 0 . . . 3.35 74.26 17 6.24 Yes 74 0.54 No 0 0 No -24 0.69 Yes 48 64.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108152416 + NM_000051 ATM 0 . . . 5.62 78.19 21 5.74 Yes 64 -2.11 No 0 0 No -58 0.46 No 49 63.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68872723 + NM_133509 RAD51B 0 . . . 4.97 75.32 22 5.37 No 63 0.9 Yes 0 0 No -21 0.95 Yes 40 66.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68594947 + NM_133509 RAD51B 0 . . . 1.28 74.4 22 4.93 No 1 0.01 No 0 0 No -30 0.63 No 44 66.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47677828 + NM_000251 MSH2 0 . . . 0.66 61.21 19 4.29 No 26 -2.34 No 0 0 No -21 0.59 No 32 18.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69009550 + NM_133509 RAD51B 0 . . . 5.17 87.97 22 5.29 No -4 0.42 No 0 0 No -37 0.69 Yes 52 26.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68664487 + NM_133509 RAD51B 0 . . . 5.06 68.19 32 5.94 Yes 50 0.82 Yes 0 0 No -32 0.69 Yes 36 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47662183 + NM_000251 MSH2 0 . . . 6.1 81.95 15 4.58 No 73 0.94 Yes 0 0 No -58 0.85 Yes 42 66.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69120630 + NM_133509 RAD51B 0 . . . 2.37 69.21 21 5.18 No -3 0.82 Yes 0 0 No -24 0.66 Yes 47 34.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68799621 + NM_004360 CDH1 0 . . . 1.23 0 33 5.83 Yes 26 1.88 Yes 0 0 No -32 0.71 Yes 32 91.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59905341 - NM_032043 BRIP1 0 . . . 3.76 86.11 17 4.8 No 34 1.06 Yes 0 0 No -39 0.43 No 47 31.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68499737 + NM_133509 RAD51B 0 . . . 1.56 76 45 6.76 Yes 0 1.58 Yes 0 0 No -24 0.46 No 33 65.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56802693 + NM_058216 RAD51C 0 . . . 1.28 72.79 33 5.92 Yes 54 -1.78 No 0 0 No -28 0.49 No 28 68.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68994491 + NM_133509 RAD51B 0 . . . 0.78 69.41 37 6.51 Yes 20 -3.42 No 0 0 No -35 0.33 No 28 45.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41233197 - NM_007294 BRCA1 0 . . . 3.8 83.08 20 7.14 Yes -1 0.92 Yes 0 0 No -19 0.74 Yes 48 79.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108102131 + NM_000051 ATM 0 . . . 3.64 73.35 36 4.45 No 8 0.46 No 0 0 No -35 0.3 No 50 61.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131898728 + NM_005732 RAD50 0 . . . 1.61 64.18 20 5.1 No 75 -3.93 No 0 0 No -19 0.23 No 42 47.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94215916 - NM_005591 MRE11 0 . . . 1.26 76.6 35 6.08 Yes 28 0.96 Yes 0 0 No -34 0.65 No 30 87.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190712379 + NM_000534 PMS1 0 . . . 6.87 91.37 47 8.72 Yes 44 0.61 No 0 0 No -27 0.66 No 46 81.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69100777 + NM_133509 RAD51B 0 . . . 3.25 73.09 24 5.2 No 18 0.21 No 0 0 No -23 0.39 No 43 69.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37034227 + NM_000249 MLH1 0 . . . 3.82 77.17 24 4.79 No 33 0.63 No 0 0 No -23 0.65 No 49 42.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68971507 + NM_133509 RAD51B 0 . . . 2.15 62.49 17 5.57 Yes 18 0.62 No 0 0 No -16 0.75 Yes 40 63.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190665773 + NM_000534 PMS1 0 . . . 6.76 80.06 19 4.23 No 69 0.95 Yes 0 0 No -19 0.66 No 47 32.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68548326 + NM_133509 RAD51B 0 . . . 1.34 74.06 35 7.67 Yes 50 1.04 Yes 0 0 No -34 0.87 Yes 50 52.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47684890 + NM_000251 MSH2 0 . . . 4.84 81.64 17 4.58 No 8 0.49 No 0 0 No -23 0.4 No 39 57.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59928161 - NM_032043 BRIP1 0 . . . 4.28 87.46 38 6.08 Yes 36 0.72 No 0 0 No -20 0.68 Yes 17 56.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7584105 - NM_000546 TP53 0 . . . 0.87 74.68 23 7.58 Yes 73 -3.39 No 0 0 No -22 0.63 No 54 84.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32909060 + NM_000059 BRCA2 0 . . . 0.6 66.77 31 6.08 Yes 71 1.63 Yes 0 0 No -23 0.86 Yes 41 95.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6020414 - NM_000535 PMS2 0 . . . 8.64 79.32 22 4.17 No 24 1.03 Yes 0 0 No -21 0.34 No 34 66.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190734574 + NM_000534 PMS1 0 . . . 2.97 81.41 27 5.2 No 40 0.7 No 0 0 No -26 0.63 No 62 14.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68789797 + NM_004360 CDH1 0 . . . 1.82 0 19 5 No 45 0.57 No 0 0 No -18 0.56 No 13 35.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68802348 + NM_133509 RAD51B 0 . . . 7.98 79.32 25 5.26 No 2 0.08 No 0 0 No -24 0.84 Yes 48 58.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68440747 + NM_133509 RAD51B 0 . . . 0.72 70.68 21 4.9 No 69 0.39 No 0 0 No -20 0.71 Yes 46 91.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68912386 + NM_133509 RAD51B 0 . . . 3.41 68.75 39 5.45 No 25 1.34 Yes 0 0 No -25 0.93 Yes 48 40.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68577145 + NM_133509 RAD51B 0 . . . 7.51 75.53 30 6 Yes 18 1.02 Yes 0 0 No -29 0.72 Yes 40 76.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68631498 + NM_133509 RAD51B 0 . . . 1.25 69.14 31 5.56 Yes 46 -3.83 No 0 0 No -25 0.53 No 46 89.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69008147 + NM_133509 RAD51B 0 . . . 3.26 78.73 27 5.57 Yes 10 0.8 Yes 0 0 No -22 0.62 No 48 97.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68675202 + NM_133509 RAD51B 0 . . . 7.87 92.07 23 5.84 Yes 27 0.96 Yes 0 0 No -28 0.84 Yes 44 43.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89641275 + NM_000314 PTEN 0 . . . 1.01 68.18 26 5.53 No 74 1 Yes 0 0 No -25 0.66 No 53 87.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69110829 + NM_133509 RAD51B 0 . . . 4.61 74.78 19 4.94 No 65 1.46 Yes 0 0 No -24 0.43 No 28 57.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69118998 + NM_133509 RAD51B 0 . . . 8.67 85.32 32 8 Yes 70 -1.34 No 0 0 No -31 0.75 Yes 47 57.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131904677 + NM_005732 RAD50 0 . . . 2.45 72.1 25 5.56 Yes 58 -2.2 No 0 0 No -24 0.74 Yes 48 65.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47733462 + NM_000251 MSH2 0 . . . 2.98 72.15 27 5.66 Yes 10 -2.3 No 0 0 No -27 0.33 No 28 53.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89727174 + NM_000314 PTEN 0 . . . 2.78 68.57 18 4.58 No 44 1.45 Yes 0 0 No -18 0.82 Yes 45 71.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68666021 + NM_133509 RAD51B 0 . . . 5.17 78.25 34 8.34 Yes 28 0.81 Yes 0 0 No -33 0.7 Yes 48 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56792786 + NM_058216 RAD51C 0 . . . 3.39 80.22 15 5.07 No 67 -4.96 No 0 0 No -22 0.66 No 50 48.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108210382 + NM_000051 ATM 0 . . . 1.03 64.81 18 5.66 Yes 17 0.37 No 0 0 No -17 0.63 No 41 86.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41212555 - NM_007294 BRCA1 0 . . . 0.51 78.88 15 4.81 No 57 -3.82 No 0 0 No -24 0.5 No 43 36.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108215314 + NM_000051 ATM 0 . . . 3.29 79.72 23 5.39 No 46 0.3 No 0 0 No -30 0.53 No 44 79.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37086696 + NM_000249 MLH1 0 . . . 4.31 77.02 24 6 Yes 18 0.75 No 0 0 No -23 0.88 Yes 40 69.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32946274 + NM_000059 BRCA2 0 . . . 3.45 69.46 31 4.66 No 43 1.06 Yes 0 0 No -25 0.42 No 48 75.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48035169 + NM_000179 MSH6 0 . . . 6.29 80.37 16 5.83 Yes 27 2.1 Yes 0 0 No -27 0.27 No 51 80.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41020743 + NM_001164269 RAD51 0 . . . 8.42 79.21 25 6.24 Yes 4 0.08 No 0 0 No -24 0.72 Yes 51 86.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68939173 + NM_133509 RAD51B 0 . . . 2.94 69.26 20 5.83 Yes 30 -3.17 No 0 0 No -19 0.62 No 36 34.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68462611 + NM_133509 RAD51B 0 . . . 1.91 80.49 24 5.26 No 35 1.68 Yes 0 0 No -21 0.85 Yes 23 72.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59790333 - NM_032043 BRIP1 0 . . . 9.01 83.91 18 7.3 Yes 39 0.73 No 0 0 No -20 0.54 No 48 76.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105196926 + NM_021930 RINT1 0 . . . 1.52 74.54 25 5.34 No 0 0.85 Yes 0 0 No -25 0.72 Yes 45 64.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6024086 - NM_000535 PMS2 0 . . . 4.5 77.79 24 5.64 Yes 45 0.35 No 0 0 No -21 0.57 No 54 30.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94203025 - NM_005591 MRE11 0 . . . 1.69 74.12 31 5.47 No -4 1.6 Yes 0 0 No -30 0.61 No 45 58.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90954122 - NM_002485 NBN 0 . . . 0.99 71.5 28 3.97 No 76 1.81 Yes 0 0 No -28 0.78 Yes 30 77.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68637026 + NM_133509 RAD51B 0 . . . 3.75 74.94 17 4.8 No 24 1.17 Yes 0 0 No -16 0.42 No 34 90.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68661667 + NM_133509 RAD51B 0 . . . 5.74 80.85 31 7.74 Yes 45 0.68 No 0 0 No -30 0.97 Yes 47 68.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41210710 - NM_007294 BRCA1 0 . . . 4.73 70.28 74 8.02 Yes 31 0.38 No 0 0 No -24 0.6 No 45 64.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68708485 + NM_133509 RAD51B 0 . . . 4.53 71.14 26 5 No 15 0.95 Yes 0 0 No -24 0.18 No 43 96.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90966570 - NM_002485 NBN 0 . . . 2.07 57.42 29 5.22 No 54 0.69 No 0 0 No -58 0.53 No 52 37.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215659705 - NM_000465 BARD1 0 . . . 2.66 72.33 147 9.89 Yes 49 0.94 Yes 0 0 No -34 0.44 No 20 79.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94225037 - NM_005591 MRE11 0 . . . 2.45 71.77 13 4.36 No 11 1.99 Yes 0 0 No -32 0.61 No 47 85.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94188100 - NM_005591 MRE11 0 . . . 7.33 80.55 26 5.09 No 21 0.98 Yes 0 0 No -25 0.77 Yes 36 68.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29113869 - NM_001005735 CHEK2 0 . . . 6.57 93.18 18 7.21 Yes 40 1.42 Yes 0 0 No -24 0.52 No 18 88.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68806014 + NM_133509 RAD51B 0 . . . 0.26 78.82 28 5.38 No 44 -3.88 No 0 0 No -27 0.66 No 63 23.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108100894 + NM_000051 ATM 0 . . . 0.91 79.83 47 5.33 No 47 -2.39 No 0 0 No -35 0.58 No 54 63.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41266131 - NM_007294 BRCA1 0 . . . 0.94 76.63 9 5 No 45 -3.96 No 0 0 No -41 0.46 No 43 65.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33446721 - NM_002878 RAD51D 0 . . . 1.46 0 20 5.41 No 71 1.31 Yes 0 0 No -19 0.44 No 44 56.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59797685 - NM_032043 BRIP1 0 . . . 4.64 75.14 11 6.94 Yes 20 0.97 Yes 0 0 No -45 0.59 No 50 45.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900888 + NM_133509 RAD51B 0 . . . 1.99 70.13 75 8.95 Yes 71 1.19 Yes 0 0 No -33 0.62 No 40 87.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47701989 + NM_000251 MSH2 0 . . . 2.79 0 23 4.43 No 8 -2.33 No 0 0 No -22 0.66 No 40 57.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59930189 - NM_032043 BRIP1 0 . . . 1.81 76.41 43 4.45 No 18 1.19 Yes 0 0 No -27 0.69 Yes 40 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68475628 + NM_133509 RAD51B 0 . . . 1.26 70.62 23 5.83 Yes 43 1.32 Yes 0 0 No -22 0.92 Yes 39 70.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68722382 + NM_133509 RAD51B 0 . . . 1.14 57.85 17 4.58 No 29 0.07 No 0 0 No -21 0.41 No 21 31.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41223600 - NM_007294 BRCA1 0 . . . 1.96 70.38 21 4.87 No 58 1.27 Yes 0 0 No -21 0.88 Yes 13 34.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68344701 + NM_133509 RAD51B 0 . . . 0.19 69.95 20 5.57 Yes 74 0.59 No 0 0 No -19 0.72 Yes 47 25.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41228142 - NM_007294 BRCA1 0 . . . 4.7 84.19 16 3.46 No 38 0.9 Yes 0 0 No -20 0.8 Yes 20 68.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59801695 - NM_032043 BRIP1 0 . . . 1.05 57.35 36 6.68 Yes 64 0.73 No 0 0 No -35 0.72 Yes 47 46.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41232795 - NM_007294 BRCA1 0 . . . 3.29 73.19 31 7.19 Yes 53 0.99 Yes 0 0 No -30 0.47 No 41 92.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68318465 + NM_133509 RAD51B 0 . . . 2.62 0 22 5.29 No 30 0.88 Yes 0 0 No -21 0.45 No 41 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68505614 + NM_133509 RAD51B 0 . . . 0.57 82.01 25 3.96 No 26 0.49 No 0 0 No -24 0.72 Yes 45 62.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1208636 + NM_000455 STK11 0 . . . 3.97 84.41 17 4.61 No 31 0.32 No 0 0 No -44 0.72 Yes 27 74.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32961733 + NM_000059 BRCA2 0 . . . 1.48 77.91 22 4.69 No 56 0.69 No 0 0 No -21 0.72 Yes 51 44.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89675601 + NM_000314 PTEN 0 . . . 1.97 75.07 13 5.73 Yes 76 0.66 No 0 0 No -29 0.66 No 52 32.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108181824 + NM_000051 ATM 0 . . . 0.48 0 26 4.61 No 44 0.95 Yes 0 0 No -21 0.44 No 39 43.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90948963 - NM_002485 NBN 0 . . . 0.16 0 16 5.62 Yes -1 0.09 No 0 0 No -25 0.53 No 48 74.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68903878 + NM_133509 RAD51B 0 . . . 7.19 75.32 12 4.69 No 32 1.76 Yes 0 0 No -27 0.33 No 43 73.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68694248 + NM_133509 RAD51B 0 . . . 0.06 64.75 9 3.87 No 62 1.15 Yes 0 0 No -56 0.36 No 60 63.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68819189 + NM_004360 CDH1 0 . . . 5.18 84.33 14 5.83 Yes 9 1.12 Yes 0 0 No -27 0.65 No 49 94.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59779981 - NM_032043 BRIP1 0 . . . 6.64 86.29 34 7.75 Yes 61 -4.74 No 0 0 No -33 0.79 Yes 52 32.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29085800 - NM_001005735 CHEK2 0 . . . 9.18 85.26 28 8.2 Yes 5 1.13 Yes 0 0 No -27 0.94 Yes 33 51.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89701803 + NM_000314 PTEN 0 . . . 2.9 70.06 31 4.87 No 76 -5.01 No 0 0 No -23 0.49 No 42 87.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68577273 + NM_133509 RAD51B 0 . . . 4.02 76.1 30 7.53 Yes 60 0.91 Yes 0 0 No -29 0.43 No 40 78.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152347730 - NM_005431 XRCC2 0 . . . 5.63 71.34 32 7.27 Yes 23 1.67 Yes 0 0 No -31 0.89 Yes 40 67.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47643650 + NM_000251 MSH2 0 . . . 4.58 75.1 18 4.88 No -4 0.04 No 0 0 No -20 0.26 No 39 72.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48021688 + NM_000179 MSH6 0 . . . 1.02 80.49 21 5.2 No 37 0.94 Yes 0 0 No -20 0.65 No 31 80.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89636012 + NM_000314 PTEN 0 . . . 1.4 77.96 20 5.1 No 31 1 Yes 0 0 No -20 0.75 Yes 52 60.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108135843 + NM_000051 ATM 0 . . . 7.93 87.72 18 4.9 No 1 1.29 Yes 0 0 No -21 0.51 No 45 44.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190659243 + NM_000534 PMS1 0 . . . 0.89 67.64 15 4.58 No 17 0.88 Yes 0 0 No -32 0.67 Yes 41 57.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215644552 - NM_000465 BARD1 0 . . . 2.03 63.56 13 5.39 No 20 0.26 No 0 0 No -24 0.51 No 35 84.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68288144 + NM_133509 RAD51B 0 . . . 0.1 71.16 52 7.34 Yes 22 -1.98 No 0 0 No -29 0.56 No 50 68.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89643945 + NM_000314 PTEN 0 . . . 3.66 71.37 32 5.69 Yes 22 0.14 No 0 0 No -31 0.41 No 43 62.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215648343 - NM_000465 BARD1 0 . . . 0.41 0 89 9.45 Yes 71 0.65 No 0 0 No -29 0.45 No 26 43.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56784230 + NM_058216 RAD51C 0 . . . 3.7 78.89 26 4.59 No 53 0.69 No 0 0 No -25 0.73 Yes 46 70.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41010181 + NM_001164269 RAD51 0 . . . 0.09 74.68 12 6.82 Yes 4 0.41 No 0 0 No -32 0.53 No 54 87.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41225307 - NM_007294 BRCA1 0 . . . 0.33 67.28 22 4.69 No 33 1.12 Yes 0 0 No -21 0.63 No 46 77.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68411819 + NM_133509 RAD51B 0 . . . 5.73 71.04 31 5.39 No 1 1.05 Yes 0 0 No -26 0.79 Yes 53 57.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56790463 + NM_058216 RAD51C 0 . . . 1.74 0 45 5.83 Yes 72 -5.46 No 0 0 No -23 0.43 No 43 63.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68460891 + NM_133509 RAD51B 0 . . . 3.96 83.32 16 4.43 No 57 0.69 No 0 0 No -21 0.58 No 47 85.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47780891 + NM_000251 MSH2 0 . . . 5.95 71.37 29 6.24 Yes 12 0.36 No 0 0 No -29 0.37 No 40 49.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68560206 + NM_133509 RAD51B 0 . . . 2.49 79.05 16 4.69 No 73 0.51 No 0 0 No -24 0.15 No 48 69.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68650346 + NM_133509 RAD51B 0 . . . 0.57 0 16 5.2 No 9 1.36 Yes 0 0 No -26 0.77 Yes 39 45.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69055781 + NM_133509 RAD51B 0 . . . 3.35 0 23 4.63 No 7 1.35 Yes 0 0 No -22 0.73 Yes 51 79.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47686492 + NM_000251 MSH2 0 . . . 4.75 69.54 23 4.65 No 20 0.01 No 0 0 No -41 0.66 No 50 61.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47671591 + NM_000251 MSH2 0 . . . 1.72 0 22 6 Yes 15 -1.82 No 0 0 No -21 0.49 No 50 80.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45794505 - NM_001048171 MUTYH 0 . . . 9.14 90.23 27 5.68 Yes 17 1.52 Yes 0 0 No -26 0.68 Yes 41 91.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69122192 + NM_133509 RAD51B 0 . . . 4.25 72.29 21 3.94 No 13 0.15 No 0 0 No -21 0.91 Yes 39 77.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29117101 - NM_001005735 CHEK2 0 . . . 3.95 78.08 38 6.11 Yes 42 0.07 No 0 0 No -37 0.37 No 50 70.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6032365 - NM_000535 PMS2 0 . . . 2.32 57.27 30 5.3 No 22 0.81 Yes 0 0 No -24 0.76 Yes 36 83.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131915427 + NM_005732 RAD50 0 . . . 6.61 78.19 12 5.2 No 67 0.67 No 24 0.83 Yes -20 0.66 Yes 42 47.53 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr1 45801649 - NM_001048171 MUTYH 0 . . . 1.82 0 18 4.9 No 60 0.05 No 0 0 No -19 0.42 No 55 34.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48005632 + NM_000179 MSH6 0 . . . 1.93 75.89 16 5.57 Yes 74 -5.01 No 0 0 No -24 0.64 No 50 60.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108143220 + NM_000051 ATM 0 . . . 4.22 0 16 4.64 No 2 1.04 Yes 26 0.86 Yes -37 0.82 Yes 47 70.22 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68347541 + NM_133509 RAD51B 0 . . . 7.82 83.61 21 3.44 No 25 0.6 No 0 0 No -20 0.83 Yes 27 36.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68881525 + NM_133509 RAD51B 0 . . . 1.81 76.25 28 5.28 No 74 -2.47 No 0 0 No -21 0.65 No 18 24.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32932364 + NM_000059 BRCA2 0 . . . 0.32 74.68 25 4.9 No 4 0.1 No 0 0 No -24 0.65 No 46 63.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152345710 - NM_005431 XRCC2 0 . . . 1.2 55.84 23 4.75 No 61 0.3 No 0 0 No -23 0.43 No 52 31.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152357611 - NM_005431 XRCC2 0 . . . 3.44 75.52 46 6.74 Yes 9 0.37 No 0 0 No -16 0.75 Yes 48 56.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68786118 + NM_004360 CDH1 0 . . . 3.42 70.85 29 6.03 Yes 23 1.57 Yes 0 0 No -25 0.72 Yes 40 68.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52441612 - NM_004656 BAP1 0 . . . 6.31 80.99 46 8.83 Yes 51 -0.44 No 0 0 No -34 0.6 No 48 67.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68791631 + NM_133509 RAD51B 0 . . . 6.49 72.3 33 4.79 No 72 1.89 Yes 0 0 No -32 0.63 No 48 61.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23620812 - NM_024675 PALB2 0 . . . 3.53 62.06 15 4.84 No 10 -2.41 No 0 0 No -18 0.69 Yes 25 67.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94167323 - NM_005591 MRE11 0 . . . 0.47 71.61 11 4.9 No 21 0.11 No 0 0 No -21 0.72 Yes 52 46.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47669944 + NM_000251 MSH2 0 . . . 6.31 85.89 31 5.97 Yes 15 0.33 No 0 0 No -30 0.87 Yes 30 64.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59912075 - NM_032043 BRIP1 0 . . . 4.67 78.6 15 5.1 No 30 -2.99 No 0 0 No -19 0.39 No 41 95.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68473716 + NM_133509 RAD51B 0 . . . 5.03 87.4 23 5.1 No 14 0.45 No 0 0 No -23 0.92 Yes 44 87.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68947175 + NM_133509 RAD51B 0 . . . 11.24 88.21 20 5.48 No 18 0.84 Yes 0 0 No -19 0.37 No 40 92.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68823609 + NM_004360 CDH1 0 . . . 1.46 78.57 26 4.9 No 12 1.83 Yes 0 0 No -25 0.9 Yes 46 89.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68352098 + NM_133509 RAD51B 0 . . . 3.75 71.61 47 7.59 Yes 12 0.66 No 0 0 No -21 0.6 No 50 53.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32906029 + NM_000059 BRCA2 0 . . . 2.42 65.68 19 5.89 Yes 46 0.37 No 0 0 No -27 0.74 Yes 38 80.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47720082 + NM_000251 MSH2 0 . . . 6.32 81.76 27 6.95 Yes 23 0.19 No 0 0 No -26 0.89 Yes 48 84.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6035777 - NM_000535 PMS2 0 . . . 6.63 80.73 31 8.07 Yes 58 1.29 Yes 0 0 No -33 0.5 No 44 72.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59919742 - NM_032043 BRIP1 0 . . . 5.21 74.91 63 8.66 Yes 4 1.34 Yes 0 0 No -32 0.47 No 47 57.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131961825 + NM_005732 RAD50 0 . . . 2.86 0 41 7.2 Yes 23 1.57 Yes 0 0 No -38 0.48 No 35 50.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68381890 + NM_133509 RAD51B 0 . . . 3.57 75.1 26 4.45 No 47 0.6 No 0 0 No -25 0.57 No 30 75.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37088603 + NM_000249 MLH1 0 . . . 7.06 78.29 30 6.58 Yes 38 0.35 No 0 0 No -29 0.82 Yes 40 70.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41267492 - NM_007294 BRCA1 0 . . . 3.61 84.17 38 5.72 Yes 42 0.88 Yes 0 0 No -43 0.69 Yes 16 86.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59864015 - NM_032043 BRIP1 0 . . . 4.5 76.01 45 5.75 Yes 58 -6.16 No 0 0 No -31 0.64 No 48 54.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215673602 - NM_000465 BARD1 0 . . . 2.22 67.51 16 4.47 No 50 0.92 Yes 0 0 No -15 0.38 No 49 42.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23618883 - NM_024675 PALB2 0 . . . 0.67 74.68 26 5.1 No 35 0.46 No 0 0 No -26 0.69 Yes 42 66.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68471238 + NM_133509 RAD51B 0 . . . 1.84 77.63 22 4.8 No 54 0.73 No 0 0 No -22 0.79 Yes 46 79.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32895620 + NM_000059 BRCA2 0 . . . 3.33 66.54 11 4.12 No -1 0.31 No 0 0 No -28 0.86 Yes 41 59.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37091817 + NM_000249 MLH1 0 . . . 5.86 91.16 18 4.69 No 46 0.47 No 0 0 No -18 0.43 No 47 43.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94173976 - NM_005591 MRE11 0 . . . 0.51 78.27 29 5.29 No 51 0.13 No 0 0 No -28 0.63 No 54 48.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75502258 - NM_001040108 MLH3 0 . . . 4.61 84.39 19 5.48 No 75 -5.15 No 0 0 No -24 0.44 No 51 72.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59843592 - NM_032043 BRIP1 0 . . . 1.45 69.67 50 6.16 Yes 68 0.49 No 0 0 No -26 0.85 Yes 43 41.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108137062 + NM_000051 ATM 0 . . . 4.47 80.09 22 5.93 Yes 2 0.55 No 0 0 No -21 0.89 Yes 48 62.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75500729 - NM_001040108 MLH3 0 . . . 2.24 80.12 30 6.41 Yes 7 1.02 Yes 0 0 No -29 0.73 Yes 51 82.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69132415 + NM_133509 RAD51B 0 . . . 5.48 69.23 26 6.08 Yes 64 -5.2 No 0 0 No -30 0.44 No 51 67.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41259981 - NM_007294 BRCA1 0 . . . 2.82 76.57 19 4.9 No 61 1.08 Yes 0 0 No -18 0.67 Yes 27 53.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48015946 + NM_000179 MSH6 0 . . . 6.24 82.31 16 4.69 No 60 1.08 Yes 0 0 No -37 0.93 Yes 55 59.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41219537 - NM_007294 BRCA1 0 . . . 1.53 74.68 12 5 No 33 -2.8 No 0 0 No -27 0.32 No 54 22.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190712808 + NM_000534 PMS1 0 . . . 1.56 75.18 18 5.91 Yes 20 0.76 No 0 0 No -29 0.64 No 38 63.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7573544 - NM_000546 TP53 0 . . . 3.99 68.69 30 6.48 Yes 5 0.16 No 0 0 No -32 0.64 No 22 36.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68482061 + NM_133509 RAD51B 0 . . . 0.68 67.77 15 5 No 58 0.76 No 0 0 No -25 0.55 No 47 68.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68495903 + NM_133509 RAD51B 0 . . . 8.66 84.08 24 7.48 Yes 55 0.98 Yes 0 0 No -27 0.44 No 38 84.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37062044 + NM_000249 MLH1 0 . . . 6.97 79.48 52 6.22 Yes 63 0.78 Yes 0 0 No -35 0.41 No 44 54.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68417553 + NM_133509 RAD51B 0 . . . 4.82 71.76 25 4.25 No 70 1.51 Yes 0 0 No -24 0.5 No 35 88.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32906182 + NM_000059 BRCA2 0 . . . 0.22 65.58 26 5.48 No 24 0.31 No 0 0 No -26 0.9 Yes 59 26.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75497936 - NM_001040108 MLH3 0 . . . 2 0 26 5.48 No 76 -3.31 No 0 0 No -25 0.88 Yes 38 54.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131946558 + NM_005732 RAD50 0 . . . 3.85 70.26 25 4.9 No 1 0.28 No 0 0 No -24 0.91 Yes 47 61.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68598856 + NM_133509 RAD51B 0 . . . 4.43 78.2 18 4.69 No 52 0.57 No 0 0 No -21 0.39 No 48 79.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69100106 + NM_133509 RAD51B 0 . . . 2.1 69.01 20 5.3 No 5 0.28 No 0 0 No -30 0.43 No 39 77.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152345906 - NM_005431 XRCC2 0 . . . 3.89 62.75 25 6.47 Yes 38 0.23 No 0 0 No -24 0.3 No 20 74.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6020578 - NM_000535 PMS2 0 . . . 4.71 75.59 15 5.1 No 5 0.91 Yes 0 0 No -41 0.44 No 53 82.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75493635 - NM_001040108 MLH3 0 . . . 4.56 85.4 37 7.17 Yes 7 1.01 Yes 0 0 No -37 0.63 No 51 79.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108096319 + NM_000051 ATM 0 . . . 0.24 81.28 25 5.48 No 33 1.67 Yes 0 0 No -24 0.86 Yes 25 59.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68343031 + NM_133509 RAD51B 0 . . . 0.57 79.69 14 4.9 No 56 0.7 No 0 0 No -19 0.45 No 39 77.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68438951 + NM_133509 RAD51B 0 . . . 3.58 84.1 27 4.64 No 66 -5 No 0 0 No -30 0.77 Yes 50 80 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68729464 + NM_133509 RAD51B 0 . . . 8.18 77.26 26 5.37 No 16 1.19 Yes 0 0 No -25 0.92 Yes 34 91.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68853737 + NM_133509 RAD51B 0 . . . 2.24 74.66 21 5.2 No 73 0.81 Yes 0 0 No -20 0.35 No 42 74.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84389647 - NM_139076 FAM175A 0 . . . 2.77 67.91 26 4.63 No 9 0.72 No 0 0 No -25 0.68 Yes 42 81.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90991956 - NM_002485 NBN 0 . . . 4.37 74.93 33 6.71 Yes 37 1.28 Yes 0 0 No -32 0.7 Yes 49 65.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68709867 + NM_133509 RAD51B 0 . . . 2.46 73.68 20 4.8 No 22 0.32 No 0 0 No -19 0.92 Yes 40 69.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48017722 + NM_000179 MSH6 0 . . . 4.13 73.62 21 4.82 No 57 0.2 No 0 0 No -23 0.76 Yes 46 88.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68734678 + NM_133509 RAD51B 0 . . . 4.78 75.63 15 5.37 No 68 0.27 No 0 0 No -56 0.79 Yes 47 59.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68622612 + NM_133509 RAD51B 0 . . . 3.14 68.9 22 6.09 Yes 24 0.05 No 0 0 No -21 0.43 No 47 39.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68859304 + NM_133509 RAD51B 0 . . . 0.19 0 35 6.68 Yes 58 0.69 No 0 0 No -34 0.66 No 50 45.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37060357 + NM_000249 MLH1 0 . . . 3.87 70.85 22 4.9 No 5 1.36 Yes 0 0 No -21 0.72 Yes 40 85.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56796237 + NM_058216 RAD51C 0 . . . 0.85 0 18 4.53 No 40 0.96 Yes 0 0 No -31 0.56 No 49 37.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90995576 - NM_002485 NBN 0 . . . 0.67 66.44 17 3.75 No 59 1.43 Yes 0 0 No -20 0.62 No 42 91.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52438911 - NM_004656 BAP1 0 . . . 5.05 66.8 23 4.42 No 51 -4.62 No 0 0 No -20 0.91 Yes 48 39.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215668693 - NM_000465 BARD1 0 . . . 5.98 85.19 27 5.65 Yes 56 0.39 No 0 0 No -26 0.55 No 37 37.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68639358 + NM_133509 RAD51B 0 . . . 1.69 66.19 27 5.17 No 36 0.38 No 0 0 No -24 0.43 No 47 64.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69082477 + NM_133509 RAD51B 0 . . . 1.46 70.52 23 5.39 No 40 1.03 Yes 0 0 No -22 0.81 Yes 18 39.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47755089 + NM_000251 MSH2 0 . . . 3.23 72.72 29 6.59 Yes 10 0.37 No 0 0 No -28 0.63 No 48 74.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68541633 + NM_133509 RAD51B 0 . . . 7.88 80.71 25 5.29 No 25 0.8 Yes 0 0 No -24 0.89 Yes 33 90.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108201060 + NM_000051 ATM 0 . . . 0.32 64.94 18 4.06 No 37 0.77 Yes 0 0 No -20 0.81 Yes 40 45.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68607540 + NM_133509 RAD51B 0 . . . 0.03 0 25 6.15 Yes 41 0.87 Yes 0 0 No -24 0.75 Yes 50 54.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56808443 + NM_058216 RAD51C 0 . . . 2.24 74.99 15 4.52 No 27 1.09 Yes 0 0 No -27 0.52 No 49 78.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68995453 + NM_133509 RAD51B 0 . . . 0.88 72.46 21 5.63 Yes 61 1.29 Yes 0 0 No -20 0.67 Yes 63 13.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68502243 + NM_133509 RAD51B 0 . . . 3.8 77.14 28 6.37 Yes 43 0.69 No 0 0 No -27 0.95 Yes 38 92.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69060743 + NM_133509 RAD51B 0 . . . 4.28 78.81 69 5.77 Yes 24 1.06 Yes 0 0 No -29 0.63 No 34 96.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68560875 + NM_133509 RAD51B 0 . . . 4.64 65.55 19 4.68 No 55 0.79 Yes 0 0 No -18 0.74 Yes 39 83.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41256072 - NM_007294 BRCA1 0 . . . 4.93 84.41 22 5.91 Yes 52 2.07 Yes 0 0 No -21 0.75 Yes 11 51.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94164132 - NM_005591 MRE11 0 . . . 1.11 68.05 17 5.26 No 30 -4.18 No 0 0 No -16 0.57 No 49 31.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69072419 + NM_133509 RAD51B 0 . . . 5.5 78.37 19 5.74 Yes 54 -1.86 No 0 0 No -26 0.77 Yes 52 60.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68310339 + NM_133509 RAD51B 0 . . . 8.97 86.69 17 4.8 No 50 0.4 No 0 0 No -37 0.51 No 47 65.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68880094 + NM_133509 RAD51B 0 . . . 5.64 73.96 15 5.21 No 15 0.62 No 0 0 No -26 0.46 No 43 78.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94213577 - NM_005591 MRE11 0 . . . 4.08 76.54 36 6.13 Yes 60 -3.89 No 0 0 No -36 0.52 No 46 42.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215634555 - NM_000465 BARD1 0 . . . 6.06 76.02 21 6.52 Yes 30 -3.67 No 0 0 No -20 0.66 Yes 46 41.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29121796 - NM_001005735 CHEK2 0 . . . 1.17 80.65 41 7.7 Yes 76 1.47 Yes 0 0 No -40 0.48 No 50 71.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69129769 + NM_133509 RAD51B 0 . . . 0.58 77.58 28 5.57 Yes 69 -3.98 No 0 0 No -27 0.94 Yes 63 27.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94153316 - NM_005591 MRE11 0 . . . 2.58 66.3 16 5.74 Yes 45 1.38 Yes 0 0 No -26 0.68 Yes 13 90.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89640162 + NM_000314 PTEN 0 . . . 4.37 73.37 33 5.48 No 23 0.7 No 0 0 No -32 0.41 No 24 52.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32901885 + NM_000059 BRCA2 0 . . . 2.09 62.05 20 5.34 No 0 0.26 No 0 0 No -26 0.46 No 47 58.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215652199 - NM_000465 BARD1 0 . . . 3.39 0 15 5.69 Yes 40 0.73 No 0 0 No -24 0.52 No 34 69.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59843180 - NM_032043 BRIP1 0 . . . 1.74 59.63 12 4.9 No 50 1.31 Yes 0 0 No -19 0.5 No 11 45.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105208534 + NM_021930 RINT1 0 . . . 5.02 68.27 23 5.03 No 20 0.89 Yes 0 0 No -22 0.54 No 38 97.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215655293 - NM_000465 BARD1 0 . . . 8.23 81.48 17 4.79 No 74 1.02 Yes 0 0 No -21 0.76 Yes 52 61.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23627919 - NM_024675 PALB2 0 . . . 4.07 80.18 36 5.92 Yes 45 0.56 No 0 0 No -35 0.71 Yes 46 72.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59781879 - NM_032043 BRIP1 0 . . . 0.19 64.44 23 5.46 No 55 -3.5 No 0 0 No -22 0.72 Yes 47 47.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23645420 - NM_024675 PALB2 0 . . . 5.48 85.63 30 5.84 Yes 61 -2.58 No 0 0 No -32 0.4 No 50 78.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68659881 + NM_133509 RAD51B 0 . . . 1.01 0 19 4.98 No 54 1.55 Yes 0 0 No -18 0.44 No 56 40.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68696530 + NM_133509 RAD51B 0 . . . 5.75 80.25 31 5.4 No 0 0.48 No 0 0 No -30 0.94 Yes 43 79.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69036893 + NM_133509 RAD51B 0 . . . 6.38 80.49 36 5.82 Yes 72 -3.14 No 0 0 No -35 0.91 Yes 44 45.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68617620 + NM_133509 RAD51B 0 . . . 3.04 65.21 28 5.07 No 20 0.13 No 0 0 No -27 0.56 No 51 92.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41000507 + NM_001164269 RAD51 0 . . . 4.82 80.12 18 5.89 Yes 38 1.23 Yes 0 0 No -31 0.47 No 44 79.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94209978 - NM_005591 MRE11 0 . . . 0.06 82.88 27 4.26 No 61 -5.05 No 0 0 No -26 0.77 Yes 49 27.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215620137 - NM_000465 BARD1 0 . . . 3.09 68.23 24 5.48 No 33 1.13 Yes 0 0 No -23 0.88 Yes 48 27.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68685160 + NM_133509 RAD51B 0 . . . 0.95 79.52 26 6.32 Yes 8 1.09 Yes 0 0 No -25 0.8 Yes 50 80.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215657799 - NM_000465 BARD1 0 . . . 7.04 77.79 23 4.52 No 69 -3.79 No 0 0 No -30 0.79 Yes 43 92.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48015242 + NM_000179 MSH6 0 . . . 5.75 90.15 42 9.38 Yes 7 0.29 No 0 0 No -41 0.48 No 42 87.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69031012 + NM_133509 RAD51B 0 . . . 6.64 79.59 13 6.15 Yes 8 0.72 No 0 0 No -12 0.26 No 41 35.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84402872 - NM_139076 FAM175A 0 . . . 4.06 63.38 27 5.57 Yes 37 -3.02 No 0 0 No -26 0.56 No 50 62.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190710375 + NM_000534 PMS1 0 . . . 8.1 85.86 31 5.63 Yes 75 0.54 No 0 0 No -30 0.48 No 42 92.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48005688 + NM_000179 MSH6 0 . . . 2.42 73.44 50 8.49 Yes 76 -3.73 No 0 0 No -52 0.36 No 47 51.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108191857 + NM_000051 ATM 0 . . . 5.89 82.42 33 4.34 No 55 -2.94 No 0 0 No -22 0.67 Yes 48 55.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152353820 - NM_005431 XRCC2 0 . . . 5.97 78.62 38 7.83 Yes 56 -2.37 No 0 0 No -37 0.48 No 45 33.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29099002 - NM_001005735 CHEK2 0 . . . 5.03 71.91 23 5.38 No 27 0.91 Yes 0 0 No -29 0.55 No 31 74.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190658385 + NM_000534 PMS1 0 . . . 0.22 67.05 18 5.27 No 63 -3.69 No 0 0 No -23 0.85 Yes 44 70.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68290775 + NM_133509 RAD51B 0 . . . 1.21 88.41 35 7.21 Yes 21 -3.24 No 0 0 No -34 0.39 No 50 65.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89725119 + NM_000314 PTEN 0 . . . 4.23 79.28 17 6.08 Yes 61 -2.98 No 0 0 No -16 0.74 Yes 46 71.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68821131 + NM_004360 CDH1 0 . . . 1.7 71.45 16 4.58 No 19 0.56 No 0 0 No -15 0.23 No 42 65.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68968521 + NM_133509 RAD51B 0 . . . 5.61 81.1 20 6.78 Yes 41 0.46 No 0 0 No -19 0.58 No 38 57.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40992449 + NM_001164269 RAD51 0 . . . 1.12 72.02 21 4.26 No 52 1.97 Yes 0 0 No -20 0.82 Yes 58 39.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68592325 + NM_133509 RAD51B 0 . . . 4.96 80.14 27 5.57 Yes 44 0.55 No 0 0 No -26 0.78 Yes 41 43.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68549103 + NM_133509 RAD51B 0 . . . 0.91 64.46 26 5.59 Yes 51 -2.38 No 0 0 No -25 0.53 No 39 64.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47681728 + NM_000251 MSH2 0 . . . 5.84 81.4 31 6.06 Yes 69 0.7 No 0 0 No -30 0.88 Yes 40 39.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69036678 + NM_133509 RAD51B 0 . . . 1.81 75.95 35 6.65 Yes 24 -1.54 No 0 0 No -30 0.74 Yes 34 33.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68545066 + NM_133509 RAD51B 0 . . . 8.65 78.99 36 4.38 No 72 -1.9 No 0 0 No -28 0.34 No 40 68.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59810143 - NM_032043 BRIP1 0 . . . 0.31 74.16 18 5.07 No 1 0.3 No 0 0 No -17 0.37 No 44 27.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68469927 + NM_133509 RAD51B 0 . . . 5.39 83.3 35 6.36 Yes 56 0.89 Yes 0 0 No -34 0.75 Yes 36 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190653609 + NM_000534 PMS1 0 . . . 4.53 73.66 26 6.63 Yes 26 0.01 No 0 0 No -26 0.83 Yes 48 42.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190722400 + NM_000534 PMS1 0 . . . 1.23 77.96 29 5.29 No 8 -1.09 No 0 0 No -27 0.67 Yes 51 40.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68859229 + NM_004360 CDH1 0 . . . 0.82 76.19 16 3.42 No 51 -3.62 No 0 0 No -27 0.29 No 51 83.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68554878 + NM_133509 RAD51B 0 . . . 1.45 64.87 20 5.57 Yes 65 0.92 Yes 0 0 No -26 0.41 No 42 57.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69037431 + NM_133509 RAD51B 0 . . . 4.49 69.75 20 5.08 No 56 2.55 Yes 0 0 No -19 0.55 No 40 71.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108167831 + NM_000051 ATM 0 . . . 1.61 70.02 19 4.79 No 59 1.27 Yes 0 0 No -18 0.61 No 45 52.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68696658 + NM_133509 RAD51B 0 . . . 4.95 68.75 24 5.45 No 25 1.08 Yes 0 0 No -32 0.78 Yes 42 47.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69138785 + NM_133509 RAD51B 0 . . . 8.08 88.54 17 5.57 Yes 13 0.67 No 0 0 No -16 0.45 No 45 86.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68797132 + NM_133509 RAD51B 0 . . . 4.93 82.53 34 4.66 No 25 -2.12 No 0 0 No -33 0.49 No 49 85.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68449228 + NM_133509 RAD51B 0 . . . 1.28 68.34 26 5.2 No 31 0.7 No 0 0 No -25 0.91 Yes 46 58.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59905242 - NM_032043 BRIP1 0 . . . 7.03 80.45 39 7.9 Yes 16 0.59 No 0 0 No -36 0.49 No 42 58.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41016477 + NM_001164269 RAD51 0 . . . 2.62 70.52 16 5.28 No 61 1.45 Yes 0 0 No -29 0.76 Yes 26 86.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68812226 + NM_004360 CDH1 0 . . . 1.02 80.49 21 5.07 No 35 1.69 Yes 0 0 No -45 0.45 No 23 85.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59909031 - NM_032043 BRIP1 0 . . . 0.97 71.14 26 5.15 No 75 -4.87 No 0 0 No -25 0.88 Yes 48 96.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68861313 + NM_004360 CDH1 0 . . . 3.36 72.44 28 5.43 No 6 0.28 No 0 0 No -28 0.54 No 42 90.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108129161 + NM_000051 ATM 0 . . . 2.35 65.76 18 4.47 No 60 0.96 Yes 0 0 No -23 0.73 Yes 27 52.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59787570 - NM_032043 BRIP1 0 . . . 3.08 76.46 58 6.23 Yes 40 -1.89 No 0 0 No -28 0.46 No 49 83.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59846227 - NM_032043 BRIP1 0 . . . 0.04 0 32 7.56 Yes 13 -1.24 No 0 0 No -31 0.82 Yes 60 57.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215647169 - NM_000465 BARD1 0 . . . 5.12 73.69 9 2.88 No -3 1.2 Yes 0 0 No -19 0.42 No 36 35.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37033265 + NM_000249 MLH1 0 . . . 0.58 0 15 5 No 38 0.55 No 0 0 No -13 0.26 No 20 67.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32892910 + NM_000059 BRCA2 0 . . . 2.65 63.89 26 4.96 No 41 0.54 No 0 0 No -25 0.71 Yes 41 83.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68414559 + NM_133509 RAD51B 0 . . . 1.45 62.33 35 6.1 Yes 49 0.71 No 0 0 No -31 0.68 Yes 40 84.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68953626 + NM_133509 RAD51B 0 . . . 6.52 68.75 31 5.69 Yes 9 1.26 Yes 0 0 No -27 0.64 No 35 74.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190682551 + NM_000534 PMS1 0 . . . 3.33 78.67 20 5.1 No 63 0.67 No 0 0 No -42 0.53 No 51 34.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68435118 + NM_133509 RAD51B 0 . . . 4.87 80.92 29 5.71 Yes 69 0.69 No 0 0 No -28 0.49 No 35 90.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68553210 + NM_133509 RAD51B 0 . . . 2.45 75.55 19 4.99 No 8 0.16 No 0 0 No -24 0.74 Yes 50 95.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59814907 - NM_032043 BRIP1 0 . . . 3.26 72.86 11 4.12 No 75 0.84 Yes 0 0 No -37 0.8 Yes 50 63.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59785848 - NM_032043 BRIP1 0 . . . 0.29 70.56 23 6.55 Yes 29 -1.11 No 0 0 No -27 0.39 No 43 72.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69037070 + NM_133509 RAD51B 0 . . . 3.2 73.89 15 3.8 No 18 1.11 Yes 0 0 No -26 0.68 Yes 37 67.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59756844 - NM_032043 BRIP1 0 . . . 4.05 76.22 28 5.83 Yes 0 0.81 Yes 0 0 No -27 0.49 No 44 50.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68824472 + NM_133509 RAD51B 0 . . . 5.94 90.33 45 6.83 Yes 62 -3.03 No 0 0 No -34 0.55 No 44 72.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68929442 + NM_133509 RAD51B 0 . . . 1.35 0 21 5.2 No 10 1.43 Yes 0 0 No -24 0.72 Yes 41 73.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56812896 + NM_058216 RAD51C 0 . . . 5.89 71.89 17 5.57 Yes 25 0.77 Yes 0 0 No -16 0.74 Yes 41 56.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89626994 + NM_000314 PTEN 0 . . . 0.04 58.59 23 5.2 No 76 0.47 No 0 0 No -20 0.67 Yes 48 43.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215639688 - NM_000465 BARD1 0 . . . 2.76 73 19 7.07 Yes 9 1.13 Yes 0 0 No -18 0.56 No 49 77.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68510995 + NM_133509 RAD51B 0 . . . 0.64 63.16 28 5.78 Yes 27 -3.23 No 0 0 No -27 0.9 Yes 52 40.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47738223 + NM_000251 MSH2 0 . . . 0.37 70.21 32 6.36 Yes 34 1.01 Yes 0 0 No -31 0.67 Yes 20 87.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108134416 + NM_000051 ATM 0 . . . 0.45 76.23 38 6.53 Yes 76 -5.8 No 0 0 No -32 0.85 Yes 51 25.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89659174 + NM_000314 PTEN 0 . . . 2.36 74.35 20 3.39 No 26 0.13 No 0 0 No -19 0.49 No 43 76.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68684665 + NM_133509 RAD51B 0 . . . 3.67 80.43 15 4.58 No 43 -3.16 No 0 0 No -37 0.59 No 35 45.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69092424 + NM_133509 RAD51B 0 . . . 8.19 71.71 33 6.8 Yes 38 2.1 Yes 0 0 No -32 0.61 No 39 84.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68610736 + NM_133509 RAD51B 0 . . . 5.53 85.43 33 5.92 Yes 35 1.08 Yes 0 0 No -32 0.41 No 51 42.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75484217 - NM_001040108 MLH3 0 . . . 2.86 84 16 3.83 No 2 1.5 Yes 0 0 No -39 0.45 No 23 66.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69114227 + NM_133509 RAD51B 0 . . . 5.28 64.58 21 4.87 No 66 0.67 No 0 0 No -20 0.65 No 44 52.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68719956 + NM_133509 RAD51B 0 . . . 2.93 0 22 4.42 No 46 0.5 No 0 0 No -22 0.62 No 36 65.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215602541 - NM_000465 BARD1 0 . . . 3.07 56.26 22 6.13 Yes 54 1.32 Yes 0 0 No -26 0.63 No 39 46.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59792552 - NM_032043 BRIP1 0 . . . 0.06 0 23 5.39 No 20 0.5 No 0 0 No -22 0.9 Yes 38 73.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69085395 + NM_133509 RAD51B 0 . . . 0.23 76.7 23 5.83 Yes 11 0.72 No 0 0 No -21 0.53 No 47 74.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6041294 - NM_000535 PMS2 0 . . . 2.55 89.47 34 8.14 Yes 25 0.41 No 0 0 No -33 0.7 Yes 49 66.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108148962 + NM_000051 ATM 0 . . . 9.64 85.47 18 4.7 No 26 1.31 Yes 0 0 No -47 0.78 Yes 40 54.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131980370 + NM_005732 RAD50 0 . . . 5.1 81.3 22 5.74 Yes 9 1.03 Yes 0 0 No -21 0.88 Yes 49 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45802111 - NM_001048171 MUTYH 0 . . . 9.31 82.09 38 4.8 No 1 0.61 No 0 0 No -25 0.6 No 46 59.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497231 + NM_133509 RAD51B 0 . . . 9.62 89.42 14 4.47 No 28 0.5 No 0 0 No -43 0.39 No 48 81.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41020997 + NM_001164269 RAD51 0 . . . 0.73 73.61 60 7.74 Yes 57 -1.96 No 0 0 No -37 0.48 No 51 59.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68683151 + NM_133509 RAD51B 0 . . . 8.4 80.32 27 5.17 No 42 0.55 No 0 0 No -52 0.89 Yes 41 50.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56812357 + NM_058216 RAD51C 0 . . . 3.08 84.6 22 7.28 Yes 50 0.7 No 0 0 No -21 0.91 Yes 51 79.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7575876 - NM_000546 TP53 0 . . . 4.93 84.17 36 6.08 Yes 52 0.14 No 0 0 No -32 0.48 No 44 79.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68369239 + NM_133509 RAD51B 0 . . . 4.15 78.62 28 4.37 No 37 0.54 No 0 0 No -27 0.84 Yes 39 47.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23616596 - NM_024675 PALB2 0 . . . 0.56 75.12 27 5.16 No 75 1.25 Yes 0 0 No -23 0.56 No 46 45.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108160083 + NM_000051 ATM 0 . . . 7.1 85.09 21 5.1 No 73 -4.74 No 0 0 No -20 0.81 Yes 45 92.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131915758 + NM_005732 RAD50 0 . . . 5.69 78.61 17 4.8 No 68 -5.8 No 0 0 No -23 0.5 No 63 32.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68944121 + NM_133509 RAD51B 0 . . . 6.58 82.68 19 7.53 Yes 4 1.29 Yes 0 0 No -31 0.76 Yes 47 35.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68958780 + NM_133509 RAD51B 0 . . . 2.95 74.49 18 4.16 No 66 1.29 Yes 0 0 No -25 0.55 No 49 92.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59842418 - NM_032043 BRIP1 0 . . . 3.18 78.59 56 9.37 Yes 15 0.2 No 0 0 No -30 0.49 No 42 66.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33424951 - NM_002878 RAD51D 0 . . . 2.49 71.92 25 5.1 No NA NA NA 0 0 No -24 0.9 Yes 51 55.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68840943 + NM_133509 RAD51B 0 . . . 2.45 0 22 4.69 No 5 1.1 Yes 0 0 No -21 0.81 Yes 44 67.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68960656 + NM_133509 RAD51B 0 . . . 3.86 82.3 38 5.76 Yes 60 -1.82 No 0 0 No -30 0.8 Yes 53 58.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37085576 + NM_000249 MLH1 0 . . . 6.27 90.14 21 4.91 No 46 1.46 Yes 0 0 No -20 0.78 Yes 12 69.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108180154 + NM_000051 ATM 0 . . . 4.85 75.44 21 4.9 No 76 0.27 No 0 0 No -20 0.85 Yes 48 67.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89682626 + NM_000314 PTEN 0 . . . 0.45 71.78 15 5 No 0 1.42 Yes 0 0 No -22 0.63 No 52 46.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68837339 + NM_133509 RAD51B 0 . . . 2.08 75.41 23 5.69 Yes 41 -3.39 No 0 0 No -27 0.43 No 51 50.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131893583 + NM_005732 RAD50 0 . . . 0.09 75.26 20 5.2 No 47 -4.99 No 0 0 No -28 0.44 No 41 36.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69095192 + NM_133509 RAD51B 0 . . . 3.01 71.98 25 4.9 No NA NA NA 0 0 No -25 0.63 No 64 36.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215602011 - NM_000465 BARD1 0 . . . 0.53 82.11 42 6.63 Yes 39 -3.22 No 0 0 No -41 0.57 No 48 59.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84384118 - NM_139076 FAM175A 0 . . . 4.66 68.06 39 7.13 Yes 10 0.62 No 0 0 No -33 0.35 No 29 39.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68683591 + NM_133509 RAD51B 0 . . . 6.54 76.93 20 4.07 No 12 1.41 Yes 0 0 No -19 0.61 No 46 56.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68979726 + NM_133509 RAD51B 0 . . . 2 70.58 65 10.12 Yes 5 0.87 Yes 0 0 No -44 0.43 No 43 61.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41205511 - NM_007294 BRCA1 0 . . . 3.25 80.12 50 6.97 Yes 8 1.06 Yes 0 0 No -20 0.4 No 50 84.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37065130 + NM_000249 MLH1 0 . . . 5.18 81.34 23 5.39 No 76 -3.03 No 0 0 No -25 0.64 No 37 42.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33444382 - NM_002878 RAD51D 0 . . . 1.41 71.95 18 5.34 No 42 1.61 Yes 0 0 No -23 0.49 No 16 56.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105201262 + NM_021930 RINT1 0 . . . 5.94 91.19 20 6.8 Yes 52 1.24 Yes 0 0 No -29 0.55 No 49 95.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68643290 + NM_133509 RAD51B 0 . . . 6.15 86.43 24 6.44 Yes 3 0.72 No 0 0 No -23 0.84 Yes 52 64.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89637295 + NM_000314 PTEN 0 . . . 0.24 64.27 37 9.17 Yes 76 0.19 No 0 0 No -36 0.45 No 46 73.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68346836 + NM_133509 RAD51B 0 . . . 0.49 57.74 31 3.9 No 25 1.35 Yes 0 0 No -30 0.84 Yes 33 67.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89682481 + NM_000314 PTEN 0 . . . 1.75 0 20 4.9 No 64 0.93 Yes 0 0 No -19 0.78 Yes 37 48.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131906121 + NM_005732 RAD50 0 . . . 2.57 70.04 39 7.84 Yes 29 0.94 Yes 0 0 No -42 0.38 No 50 83.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69009810 + NM_133509 RAD51B 0 . . . 1.36 64.16 34 7.55 Yes 57 0.12 No 0 0 No -33 0.76 Yes 44 39.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108169036 + NM_000051 ATM 0 . . . 4.33 78.52 16 5.66 Yes 0 1.16 Yes 0 0 No -23 0.44 No 48 58.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104164462 - NM_001100119 XRCC3 0 . . . 3.87 77.97 17 5.92 Yes 36 -2.15 No 0 0 No -19 0.5 No 32 45.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108212820 + NM_000051 ATM 0 . . . 5.81 92.07 12 4.05 No 21 0.75 No 0 0 No -36 0.24 No 47 73.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47717489 + NM_000251 MSH2 0 . . . 3.77 77.41 18 4.78 No 46 1.74 Yes 0 0 No -42 0.71 Yes 12 75.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68595289 + NM_133509 RAD51B 0 . . . 4.39 72.05 47 7.21 Yes 48 0.62 No 0 0 No -29 0.56 No 42 69.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215632150 - NM_000465 BARD1 0 . . . 4.56 74.89 13 6.55 Yes 74 0.16 No 0 0 No -25 0.64 No 37 32.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68927350 + NM_133509 RAD51B 0 . . . 2.42 66.6 29 5 No 17 -3.59 No 0 0 No -28 0.84 Yes 51 43.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47713724 + NM_000251 MSH2 0 . . . 3.46 65.02 31 6.41 Yes 76 0.66 No 0 0 No -30 0.77 Yes 44 60.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68920095 + NM_133509 RAD51B 0 . . . 3.05 73.99 30 4.67 No 70 -4.45 No 0 0 No -23 0.57 No 44 47.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40986711 + NM_001164269 RAD51 0 . . . 7.07 67.15 26 5.47 No 25 0.67 No 0 0 No -31 0.45 No 44 76.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41266389 - NM_007294 BRCA1 0 . . . 0.44 0 40 5.06 No 73 -4.06 No 0 0 No -25 0.83 Yes 50 19.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94178979 - NM_005591 MRE11 0 . . . 5.49 79.12 34 6.2 Yes 73 0.34 No 0 0 No -33 0.79 Yes 47 79.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59848979 - NM_032043 BRIP1 0 . . . 1.69 61.72 31 6.89 Yes 46 0.88 Yes 0 0 No -30 0.88 Yes 50 56.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23646089 - NM_024675 PALB2 0 . . . 6.36 77.22 13 5.25 No 35 0.56 No 0 0 No -21 0.76 Yes 32 74.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32892233 + NM_000059 BRCA2 0 . . . 5.87 81.05 33 9.42 Yes 22 0.56 No 0 0 No -32 0.93 Yes 36 55.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59895260 - NM_032043 BRIP1 0 . . . 0.09 68.06 13 5.1 No 44 -4.66 No 0 0 No -39 0.3 No 46 69.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52434017 - NM_004656 BAP1 0 . . . 0.24 71.99 28 6.31 Yes 46 0.65 No 0 0 No -27 0.41 No 36 28.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108198626 + NM_000051 ATM 0 . . . 0.26 0 17 3.79 No 66 -2.81 No 0 0 No -19 0.8 Yes 24 58.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90979574 - NM_002485 NBN 0 . . . 2.57 78.34 29 7.35 Yes 0 1.11 Yes 0 0 No -28 0.92 Yes 32 54.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108139110 + NM_000051 ATM 0 . . . 8.85 74.77 23 5.39 No 74 0.4 No 21 0.91 Yes -31 0.59 No 44 57.52 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr11 94171127 - NM_005591 MRE11 0 . . . 4.92 78 19 5.66 Yes 7 1.07 Yes 0 0 No -25 0.64 No 51 88.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105189619 + NM_021930 RINT1 0 . . . 1.14 73.84 44 6.7 Yes 7 1.08 Yes 0 0 No -20 0.34 No 51 58.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94217182 - NM_005591 MRE11 0 . . . 1.43 78.67 22 5.2 No 57 1.48 Yes 0 0 No -42 0.66 No 46 84.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68816293 + NM_133509 RAD51B 0 . . . 2.04 74.73 14 4.9 No 33 1 Yes 0 0 No -24 0.78 Yes 39 58.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89720253 + NM_000314 PTEN 0 . . . 1.02 69.16 17 5.96 Yes 47 1.21 Yes 0 0 No -37 0.57 No 57 62.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68715877 + NM_133509 RAD51B 0 . . . 3.54 84.45 22 4.31 No 55 0.71 No 0 0 No -17 0.59 No 46 78.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131899631 + NM_005732 RAD50 0 . . . 2.33 65.91 21 4.8 No 18 1.24 Yes 0 0 No -20 0.6 No 40 92.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68547322 + NM_133509 RAD51B 0 . . . 5.9 84.17 23 5.39 No 12 0.77 No 0 0 No -22 0.92 Yes 46 76.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89642192 + NM_000314 PTEN 0 . . . 2.84 76.99 22 5.29 No 73 -5.29 No 0 0 No -22 0.53 No 51 93.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94157364 - NM_005591 MRE11 0 . . . 0.4 64.33 18 4.28 No 40 -3.84 No 0 0 No -21 0.47 No 51 51.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37054842 + NM_000249 MLH1 0 . . . 2.1 72.33 19 5 No 48 0.59 No 0 0 No -54 0.53 No 51 41.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69092352 + NM_133509 RAD51B 0 . . . 1.04 81.93 16 5.42 No NA NA NA 0 0 No -21 0.3 No 46 32.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1227669 + NM_000455 STK11 0 . . . 0.75 68.7 26 4.65 No 24 1.1 Yes 0 0 No -28 0.38 No 34 85.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68875650 + NM_133509 RAD51B 0 . . . 6.72 77.44 18 5.99 Yes 11 1.75 Yes 0 0 No -29 0.59 No 47 84.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90982176 - NM_002485 NBN 0 . . . 0.14 83 22 5.2 No 68 0.88 Yes 0 0 No -21 0.65 No 48 50.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68352774 + NM_133509 RAD51B 0 . . . 10.41 90.93 22 6.3 Yes 26 0.87 Yes 0 0 No -21 0.71 Yes 47 85.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68722174 + NM_133509 RAD51B 0 . . . 5.69 76.67 38 5.53 No -3 -0.38 No 0 0 No -23 0.57 No 43 55.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108174645 + NM_000051 ATM 0 . . . 5.09 77.08 28 5.29 No -2 0.18 No 0 0 No -27 0.55 No 38 62.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215655500 - NM_000465 BARD1 0 . . . 0.87 71.72 26 4.96 No -1 0.99 Yes 0 0 No -23 0.65 No 42 41.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47643613 + NM_000251 MSH2 0 . . . 4.25 78.62 16 4.69 No -4 0.73 No 0 0 No -15 0.38 No 40 56.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68886814 + NM_133509 RAD51B 0 . . . 5.34 74.99 38 5.65 Yes 66 1.73 Yes 0 0 No -17 0.54 No 47 89.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68863728 + NM_133509 RAD51B 0 . . . 5.59 81.29 54 5.37 No 35 1.95 Yes 0 0 No -22 0.7 Yes 49 50.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215667331 - NM_000465 BARD1 0 . . . 1.29 0 13 4.36 No 38 -3.05 No 0 0 No -29 0.74 Yes 53 60.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68847547 + NM_004360 CDH1 0 . . . 2.02 75.24 15 7.42 Yes 26 -1.53 No 0 0 No -37 0.67 Yes 47 78.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89639701 + NM_000314 PTEN 0 . . . 1.82 0 15 5.48 No 74 0.67 No 0 0 No -24 0.3 No 57 26.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41209936 - NM_007294 BRCA1 0 . . . 1.32 83.85 37 7.9 Yes 33 0.9 Yes 0 0 No -36 0.48 No 51 69.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68827034 + NM_133509 RAD51B 0 . . . 1.84 72.37 30 6.32 Yes NA NA NA 0 0 No -29 0.71 Yes 38 61.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190664845 + NM_000534 PMS1 0 . . . 1.37 65.56 10 6.48 Yes 24 0.98 Yes 0 0 No -27 0.82 Yes 29 65.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68882169 + NM_133509 RAD51B 0 . . . 0.89 62.39 27 6.52 Yes 46 1.09 Yes 0 0 No -26 0.39 No 21 53.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40998433 + NM_001164269 RAD51 0 . . . 0.19 70.27 14 4.47 No 72 0.51 No 0 0 No -17 0.23 No 44 83.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108207224 + NM_000051 ATM 0 . . . 2.36 71.12 24 5.48 No 30 1.04 Yes 0 0 No -24 0.58 No 28 77.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68473684 + NM_133509 RAD51B 0 . . . 1.84 68.73 24 5.27 No 59 0.36 No 0 0 No -30 0.53 No 46 90.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215654694 - NM_000465 BARD1 0 . . . 2.87 75.87 16 4.69 No 73 0.12 No 0 0 No -18 0.38 No 45 60.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68386073 + NM_133509 RAD51B 0 . . . 3.37 73.43 24 6.32 Yes 45 -2.3 No 0 0 No -23 0.91 Yes 45 52.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41197602 - NM_007294 BRCA1 0 . . . 6.65 84.53 41 6.7 Yes -3 1.63 Yes 0 0 No -23 0.39 No 51 70.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89635578 + NM_000314 PTEN 0 . . . 5.01 74.27 19 4.8 No 49 1.16 Yes 0 0 No -16 0.64 No 52 83.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152368216 - NM_005431 XRCC2 0 . . . 2.69 67.95 20 4.69 No 16 1.02 Yes 0 0 No -19 0.58 No 42 83.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68809904 + NM_004360 CDH1 0 . . . 0.67 0 17 4.58 No 32 0.12 No 0 0 No -60 0.56 No 36 63.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59857391 - NM_032043 BRIP1 0 . . . 2.67 76.96 32 5.83 Yes 4 0.16 No 0 0 No -31 0.79 Yes 49 79.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56785011 + NM_058216 RAD51C 0 . . . 1.86 73.82 22 4.66 No 57 0.41 No 0 0 No -21 0.41 No 50 54.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90976654 - NM_002485 NBN 0 . . . 4.67 81.45 22 5.16 No 24 0.85 Yes 0 0 No -22 0.38 No 48 84.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190664620 + NM_000534 PMS1 0 . . . 1.11 70.81 22 5.29 No 69 -2.36 No 0 0 No -21 0.49 No 37 50.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68855766 + NM_004360 CDH1 0 . . . 1.13 70.74 13 4.72 No 58 0.14 No 0 0 No -25 0.87 Yes 40 45.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68475604 + NM_133509 RAD51B 0 . . . 4.74 74.33 22 7.21 Yes 56 1.86 Yes 0 0 No -21 0.95 Yes 39 63.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105202916 + NM_021930 RINT1 0 . . . 3.04 84.48 21 4.77 No 45 1.11 Yes 0 0 No -24 0.39 No 44 95.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68557375 + NM_133509 RAD51B 0 . . . 2.74 58.18 30 5.48 No 40 1.28 Yes 0 0 No -30 0.41 No 36 66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68814160 + NM_004360 CDH1 0 . . . 1.91 77.18 42 6.7 Yes 31 1.25 Yes 0 0 No -41 0.8 Yes 47 78.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90966389 - NM_002485 NBN 0 . . . 2.57 69.47 39 6.15 Yes 43 -4.29 No 0 0 No -31 0.31 No 52 41.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950142 + NM_005732 RAD50 0 . . . 1.83 69.76 48 6.2 Yes 38 0.78 Yes 0 0 No -27 0.48 No 44 76.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94149449 - NM_005591 MRE11 0 . . . 4.6 67.45 31 3.94 No 51 0.67 No 0 0 No -23 0.65 No 53 40.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108100816 + NM_000051 ATM 0 . . . 2.36 74.88 25 4.87 No 28 -3.72 No 0 0 No -24 0.72 Yes 49 91.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59940597 - NM_032043 BRIP1 0 . . . 3.51 85.46 23 5.22 No 66 0.2 No 0 0 No -21 0.37 No 55 36.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90945508 - NM_002485 NBN 0 . . . 3.14 64.02 24 5.29 No 1 0.53 No 0 0 No -21 0.68 Yes 57 34.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94175018 - NM_005591 MRE11 0 . . . 0.06 73.88 10 4.9 No 58 1.1 Yes 0 0 No -25 0.54 No 44 32.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32970845 + NM_000059 BRCA2 0 . . . 2.06 0 28 4.23 No 54 0.18 No 0 0 No -22 0.75 Yes 32 74.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68944598 + NM_133509 RAD51B 0 . . . 2.3 0 25 4.9 No 74 1.13 Yes 0 0 No -24 0.53 No 42 27.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89714986 + NM_000314 PTEN 0 . . . 3.51 71.65 19 5 No 53 1.09 Yes 0 0 No -18 0.66 No 52 40.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90976007 - NM_002485 NBN 0 . . . 0.26 0 24 6.62 Yes 64 -4.16 No 0 0 No -23 0.69 Yes 48 43.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48035558 + NM_000179 MSH6 0 . . . 1.18 63.95 21 5.18 No 74 -5.53 No 0 0 No -25 0.79 Yes 36 57.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94225008 - NM_005591 MRE11 0 . . . 4.58 77.49 19 4.52 No 40 1.98 Yes 0 0 No -18 0.59 No 45 48.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131895450 + NM_005732 RAD50 0 . . . 5.23 83.29 23 6 Yes 48 0.66 No 0 0 No -22 0.41 No 46 69.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75487045 - NM_001040108 MLH3 0 . . . 0.51 65.86 34 6.16 Yes 75 1.14 Yes 0 0 No -31 0.71 Yes 45 31.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6044344 - NM_000535 PMS2 0 . . . 2.79 84.41 14 5.44 No 26 1.31 Yes 0 0 No -25 0.37 No 44 86.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108227434 + NM_000051 ATM 0 . . . 3.05 73.53 24 6.09 Yes -1 0.63 No 0 0 No -23 0.85 Yes 47 48.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41005790 + NM_001164269 RAD51 0 . . . 9.28 95.02 38 6.1 Yes 3 1.47 Yes 0 0 No -37 0.85 Yes 43 59.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105195972 + NM_021930 RINT1 0 . . . 2.97 78.09 16 4.24 No 39 -3.99 No 0 0 No -43 0.64 No 47 88.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68475213 + NM_133509 RAD51B 0 . . . 2.06 63.25 12 5.38 No 36 0.22 No 0 0 No -22 0.48 No 39 77.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56810181 + NM_058216 RAD51C 0 . . . 0.7 61.31 23 5.74 Yes 10 -2.36 No 0 0 No -22 0.81 Yes 43 87.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89669875 + NM_000314 PTEN 0 . . . 8.69 86.74 30 6.89 Yes 3 1.37 Yes 0 0 No -29 0.96 Yes 41 68.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68330324 + NM_133509 RAD51B 0 . . . 10.62 80.41 18 5.21 No 45 0.56 No 0 0 No -22 0.81 Yes 44 76.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89703177 + NM_000314 PTEN 0 . . . 6.51 74.05 32 7.82 Yes 70 0.02 No 0 0 No -31 0.78 Yes 49 56.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152372849 - NM_005431 XRCC2 0 . . . 3.65 80 47 6.49 Yes NA NA NA 0 0 No -25 0.77 Yes 50 45.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41234937 - NM_007294 BRCA1 0 . . . 3.53 69.53 31 6.74 Yes 68 -6.19 No 0 0 No -30 0.88 Yes 49 46.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32919117 + NM_000059 BRCA2 0 . . . 3.56 86.96 21 6.63 Yes 5 0.74 No 0 0 No -30 0.4 No 53 82.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108093975 + NM_000051 ATM 0 . . . 1.49 69.5 28 5.42 No 67 -3.85 No 0 0 No -27 0.5 No 53 38.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68988617 + NM_133509 RAD51B 0 . . . 0.13 64.84 45 7.44 Yes 37 0.68 No 0 0 No -25 0.59 No 41 41.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68442878 + NM_133509 RAD51B 0 . . . 2.94 86.4 16 4.53 No 2 1.51 Yes 0 0 No -19 0.85 Yes 44 47.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89729068 + NM_000314 PTEN 0 . . . 4.17 67.97 10 4.68 No 1 1.23 Yes 0 0 No -25 0.37 No 42 80.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68812327 + NM_133509 RAD51B 0 . . . 2.58 76.97 20 5.1 No 63 1.08 Yes 0 0 No -28 0.87 Yes 52 69.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59831707 - NM_032043 BRIP1 0 . . . 5.02 78.84 17 5.29 No 75 -6.76 No 0 0 No -16 0.63 No 53 27.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33430605 - NM_002878 RAD51D 0 . . . 7.04 67.17 27 5.16 No -1 0.27 No 0 0 No -26 0.73 Yes 45 72.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59775148 - NM_032043 BRIP1 0 . . . 2.68 74.45 21 5.1 No 7 0.62 No 0 0 No -20 0.75 Yes 50 44.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59912861 - NM_032043 BRIP1 0 . . . 8.23 81.03 30 8.75 Yes 43 1.05 Yes 0 0 No -29 0.77 Yes 32 76.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68393040 + NM_133509 RAD51B 0 . . . 2.94 76.1 31 5.66 Yes 67 0.28 No 0 0 No -27 0.55 No 39 72.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69109511 + NM_133509 RAD51B 0 . . . 1.67 66.07 33 6.08 Yes 75 0.22 No 0 0 No -32 0.63 No 50 84.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32974176 + NM_000059 BRCA2 0 . . . 1.05 80.89 33 6.7 Yes 76 1.02 Yes 0 0 No -32 0.8 Yes 45 71.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68294180 + NM_133509 RAD51B 0 . . . 1.98 52.92 23 4.84 No 38 0.61 No 0 0 No -22 0.76 Yes 57 48.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37085282 + NM_000249 MLH1 0 . . . 0.53 0 16 5.29 No 11 0.82 Yes 0 0 No -15 0.49 No 42 72.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47641151 + NM_000251 MSH2 0 . . . 6.69 67.73 15 4.58 No 58 0.41 No 0 0 No -14 0.43 No 47 40.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108233977 + NM_000051 ATM 0 . . . 9.98 85.3 17 7.42 Yes 7 0.56 No 0 0 No -22 0.89 Yes 51 88.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52438774 - NM_004656 BAP1 0 . . . 4.61 73.57 22 6.78 Yes 14 0.22 No 0 0 No -21 0.65 No 24 41.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48033990 + NM_000179 MSH6 0 . . . 3.28 73.47 17 6.08 Yes 0 0.82 Yes 0 0 No -27 0.6 No 38 62.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105181221 + NM_021930 RINT1 0 . . . 3.75 77.45 20 5.1 No 61 1.25 Yes 0 0 No -19 0.67 Yes 52 80.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68327531 + NM_133509 RAD51B 0 . . . 8.12 76.89 115 9.75 Yes 23 0.53 No 0 0 No -35 0.67 Yes 45 70.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29138657 - NM_001005735 CHEK2 0 . . . 1.39 73.23 23 4.14 No 50 1.78 Yes 0 0 No -23 0.67 Yes 52 61.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94153562 - NM_005591 MRE11 0 . . . 8.45 77.09 22 4.9 No 50 1.28 Yes 0 0 No -21 0.76 Yes 41 62.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68945075 + NM_133509 RAD51B 0 . . . 2.73 73.9 15 5.29 No 62 -3.6 No 0 0 No -43 0.92 Yes 44 85.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68680688 + NM_133509 RAD51B 0 . . . 1.98 76.26 22 4.35 No 20 0.94 Yes 0 0 No -22 0.89 Yes 23 35.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59827707 - NM_032043 BRIP1 0 . . . 5.09 91.51 13 5.29 No 27 1.28 Yes 0 0 No -21 0.75 Yes 50 49.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7573781 - NM_000546 TP53 0 . . . 0.15 0 55 7.81 Yes 32 2.03 Yes 0 0 No -31 0.39 No 54 60.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68461185 + NM_133509 RAD51B 0 . . . 6.12 77.08 20 4.47 No 29 0.96 Yes 0 0 No -24 0.38 No 39 77.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69040238 + NM_133509 RAD51B 0 . . . 1.74 68.46 22 4.69 No 43 1.77 Yes 0 0 No -21 0.63 No 37 73.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68985901 + NM_133509 RAD51B 0 . . . 0.07 66.04 32 5.49 No 67 -2.29 No 0 0 No -31 0.51 No 50 45.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47743582 + NM_000251 MSH2 0 . . . 8.24 84.26 13 5.38 No 3 0.74 No 0 0 No -19 0.42 No 55 77.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94196223 - NM_005591 MRE11 0 . . . 3.14 0 21 5.18 No 48 1.25 Yes 0 0 No -27 0.29 No 45 82.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69101269 + NM_133509 RAD51B 0 . . . 7.9 79.19 32 5.04 No 9 0.81 Yes 0 0 No -31 0.79 Yes 49 92.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68557771 + NM_133509 RAD51B 0 . . . 3.51 69.24 44 7.03 Yes 54 0.91 Yes 0 0 No -43 0.9 Yes 48 91.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68583213 + NM_133509 RAD51B 0 . . . 4.98 74.33 28 5.74 Yes 69 -5.45 No 0 0 No -27 0.73 Yes 49 51.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6046200 - NM_000535 PMS2 0 . . . 4.41 68.95 24 4.59 No 16 0.96 Yes 0 0 No -23 0.62 No 42 86.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23633096 - NM_024675 PALB2 0 . . . 0.3 61.17 29 6.19 Yes 3 0.1 No 0 0 No -28 0.52 No 45 73.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23634696 - NM_024675 PALB2 0 . . . 1.63 65.75 21 6.32 Yes 25 1.05 Yes 0 0 No -20 0.48 No 37 28.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68794199 + NM_004360 CDH1 0 . . . 7.67 82.94 41 6.78 Yes 19 1.51 Yes 0 0 No -28 0.7 Yes 39 94.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6033911 - NM_000535 PMS2 0 . . . 1.08 84.22 21 4.58 No 33 1.12 Yes 0 0 No -20 0.79 Yes 51 32.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37054033 + NM_000249 MLH1 0 . . . 0.66 0 28 4.25 No 69 0.83 Yes 0 0 No -23 0.46 No 43 26.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89622837 + NM_000314 PTEN 0 . . . 3.63 73.18 12 4.24 No NA NA NA 0 0 No -18 0.61 No 49 76.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108106667 + NM_000051 ATM 0 . . . 0.9 0 17 5.29 No -3 0.58 No 0 0 No -16 0.54 No 28 52.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89664386 + NM_000314 PTEN 0 . . . 2.12 76.61 31 6.08 Yes 76 2.09 Yes 0 0 No -21 0.53 No 22 51.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105176568 + NM_021930 RINT1 0 . . . 6.2 89.93 12 5.66 Yes 23 1.54 Yes 0 0 No -44 0.34 No 35 90.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90956488 - NM_002485 NBN 0 . . . 1.8 0 22 5.6 Yes 28 0.16 No 0 0 No -25 0.55 No 52 40.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41225103 - NM_007294 BRCA1 0 . . . 2.78 70.85 28 4.24 No 30 2.05 Yes 0 0 No -27 0.49 No 40 89.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104170875 - NM_001100119 XRCC3 0 . . . 2.19 80.61 30 6 Yes 66 1.06 Yes 0 0 No -29 0.81 Yes 48 60.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47648342 + NM_000251 MSH2 0 . . . 2.01 0 26 5.8 Yes 20 0.58 No 0 0 No -25 0.54 No 50 91.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68966178 + NM_133509 RAD51B 0 . . . 6.73 77.79 23 3.57 No -3 1.73 Yes 0 0 No -29 0.37 No 46 74.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89655858 + NM_000314 PTEN 0 . . . 1.65 0 37 5.98 Yes 39 1.02 Yes 0 0 No -27 0.64 No 42 84.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68833109 + NM_133509 RAD51B 0 . . . 3.72 79.98 27 5.39 No 13 1.04 Yes 0 0 No -26 0.84 Yes 45 54.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6048337 - NM_000535 PMS2 0 . . . 5.88 82.38 14 5.83 Yes 40 -1.81 No 0 0 No -27 0.81 Yes 45 53.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59820653 - NM_032043 BRIP1 0 . . . 4.62 83.14 21 4.01 No 14 0.72 No 0 0 No -24 0.92 Yes 44 48.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68718676 + NM_133509 RAD51B 0 . . . 0.97 58.57 21 6.47 Yes 10 1.64 Yes 0 0 No -26 0.75 Yes 48 70.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59858911 - NM_032043 BRIP1 0 . . . 2.66 75.88 32 6.43 Yes 56 1.22 Yes 0 0 No -31 0.76 Yes 50 68.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47638349 + NM_000251 MSH2 0 . . . 1.54 68.95 27 5.39 No 16 0.97 Yes 0 0 No -26 0.53 No 42 89.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23641142 - NM_024675 PALB2 0 . . . 0.38 62.47 28 5.37 No 24 0.89 Yes 0 0 No -46 0.81 Yes 51 63.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47670749 + NM_000251 MSH2 0 . . . 0.55 66.11 19 4.79 No 57 -3.38 No 0 0 No -25 0.68 Yes 37 97.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41006782 + NM_001164269 RAD51 0 . . . 5.38 74.76 24 5.69 Yes -2 0.01 No 0 0 No -23 0.56 No 46 59.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152360093 - NM_005431 XRCC2 0 . . . 7.06 80.22 32 6.08 Yes 75 1.32 Yes 0 0 No -31 0.51 No 41 68.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68344782 + NM_133509 RAD51B 0 . . . 4.77 85.37 28 5.39 No 32 0.62 No 0 0 No -27 0.71 Yes 50 82.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68375861 + NM_133509 RAD51B 0 . . . 0.68 79.41 22 8.63 Yes 73 0.64 No 0 0 No -21 0.8 Yes 45 85.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108231768 + NM_000051 ATM 0 . . . 4.24 71.09 60 6.84 Yes 76 -3.24 No 0 0 No -34 0.89 Yes 54 63.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47798637 + NM_000251 MSH2 0 . . . 3.13 72.24 71 7.27 Yes 18 -2.13 No 0 0 No -24 0.56 No 50 34.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37072560 + NM_000249 MLH1 0 . . . 4.72 75.31 22 4.72 No 10 0.09 No 0 0 No -24 0.36 No 48 60.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68310647 + NM_133509 RAD51B 0 . . . 12.14 88.58 40 6.4 Yes 56 1 Yes 0 0 No -39 0.54 No 28 82.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94191704 - NM_005591 MRE11 0 . . . 2 69.33 18 4.9 No -1 0.75 No 0 0 No -17 0.71 Yes 51 64.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68517672 + NM_133509 RAD51B 0 . . . 7.15 82.42 9 3.87 No 14 0.19 No 0 0 No -27 0.95 Yes 44 89.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69122451 + NM_133509 RAD51B 0 . . . 3.54 78.31 20 5.09 No 20 -0.81 No 0 0 No -19 0.48 No 47 61.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47805579 + NM_000251 MSH2 0 . . . 4.66 68.48 19 4.47 No 73 1.29 Yes 0 0 No -18 0.72 Yes 40 48.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108126672 + NM_000051 ATM 0 . . . 5.36 70.72 22 4.58 No 31 0.94 Yes 0 0 No -21 0.91 Yes 27 75.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69099193 + NM_133509 RAD51B 0 . . . 0.88 69.71 25 4.82 No 24 -3.85 No 0 0 No -24 0.32 No 45 31.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131960762 + NM_005732 RAD50 0 . . . 5.36 77.94 32 9.34 Yes -2 0.28 No 0 0 No -29 0.31 No 45 57.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59800100 - NM_032043 BRIP1 0 . . . 4.11 71.39 27 5.29 No 7 0.3 No 0 0 No -32 0.26 No 48 84.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23622193 - NM_024675 PALB2 0 . . . 4.83 83.88 32 5.67 Yes 6 1.25 Yes 0 0 No -22 0.53 No 52 85.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68907145 + NM_133509 RAD51B 0 . . . 8.11 85.35 22 5.02 No -1 0.88 Yes 0 0 No -22 0.72 Yes 45 85.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59761588 - NM_032043 BRIP1 0 . . . 0.57 0 24 5.48 No 63 0.47 No 0 0 No -23 0.93 Yes 43 55.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90960022 - NM_002485 NBN 0 . . . 7.21 88.14 9 4.47 No 0 0.56 No 0 0 No -17 0.49 No 43 66.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68516511 + NM_133509 RAD51B 0 . . . 7.89 85.04 35 6 Yes 34 1.04 Yes 0 0 No -29 0.77 Yes 42 85.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68293704 + NM_133509 RAD51B 0 . . . 1.72 64.73 14 4.47 No 54 0.84 Yes 0 0 No -25 0.35 No 41 85.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131897634 + NM_005732 RAD50 0 . . . 5.67 75.78 19 4.83 No 73 0.32 No 0 0 No -18 0.34 No 46 56.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84399536 - NM_139076 FAM175A 0 . . . 2.7 72.37 34 7.44 Yes 46 0.7 No 0 0 No -33 0.68 Yes 47 76.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190723209 + NM_000534 PMS1 0 . . . 1.22 72.91 29 5.37 No 8 1.14 Yes 0 0 No -23 0.84 Yes 37 49.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68920461 + NM_133509 RAD51B 0 . . . 1.54 69.14 34 6.77 Yes 74 0.46 No 0 0 No -33 0.66 No 44 50.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23641322 - NM_024675 PALB2 0 . . . 0.96 70.24 27 6.63 Yes 1 0.26 No 0 0 No -26 0.83 Yes 16 86.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37036847 + NM_000249 MLH1 0 . . . 1.33 67.58 22 5.17 No -3 0 No 0 0 No -21 0.55 No 45 97.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56813157 + NM_058216 RAD51C 0 . . . 7.44 90.74 24 6.78 Yes 8 1.43 Yes 0 0 No -23 0.85 Yes 50 95.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56775491 + NM_058216 RAD51C 0 . . . 1.33 76.85 16 5.74 Yes 33 1.13 Yes 0 0 No -30 0.66 No 50 48.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90972870 - NM_002485 NBN 0 . . . 0.53 74.28 23 4.4 No 45 0.38 No 0 0 No -22 0.69 Yes 44 94.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69082566 + NM_133509 RAD51B 0 . . . 4.62 85.34 21 5.85 Yes 39 0.56 No 0 0 No -29 0.42 No 41 83.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69120536 + NM_133509 RAD51B 0 . . . 4.85 82.74 21 5.04 No 15 0.04 No 0 0 No -20 0.64 No 43 76.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41195296 - NM_007294 BRCA1 0 . . . 7.49 78.07 17 4.58 No 63 0.12 No 0 0 No -16 0.45 No 42 57.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68821760 + NM_133509 RAD51B 0 . . . 1.81 79.36 16 4.23 No 4 0.6 No 0 0 No -20 0.28 No 50 70.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68857617 + NM_133509 RAD51B 0 . . . 4.09 74.46 17 6.62 Yes 73 -5.09 No 0 0 No -16 0.72 Yes 55 53.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68722739 + NM_133509 RAD51B 0 . . . 5.54 75.27 32 4.37 No 10 1.11 Yes 0 0 No -32 0.29 No 48 64.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68535674 + NM_133509 RAD51B 0 . . . 4.79 83.55 21 5.2 No 46 1.11 Yes 0 0 No -20 0.53 No 49 69.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69065511 + NM_133509 RAD51B 0 . . . 4.11 85.79 27 5.05 No 9 -0.2 No 0 0 No -26 0.83 Yes 49 77.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41278882 - NM_007294 BRCA1 0 . . . 0.99 0 23 7.07 Yes 37 1.49 Yes 0 0 No -22 0.86 Yes 56 12.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29135485 - NM_001005735 CHEK2 0 . . . 0.42 74.73 37 5.93 Yes 32 1.01 Yes 0 0 No -20 0.91 Yes 26 51.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68567577 + NM_133509 RAD51B 0 . . . 0.96 69.61 42 7.29 Yes 72 -5.27 No 0 0 No -28 0.42 No 40 43.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108134719 + NM_000051 ATM 0 . . . 0.53 57.4 45 7.72 Yes -4 0.12 No 0 0 No -29 0.33 No 62 20.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215610183 - NM_000465 BARD1 0 . . . 2.98 69.3 49 5.43 No -1 1.13 Yes 0 0 No -28 0.51 No 42 58.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32961915 + NM_000059 BRCA2 0 . . . 1.01 0 23 4.06 No 7 0.73 No 0 0 No -22 0.35 No 42 74.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68383458 + NM_133509 RAD51B 0 . . . 1.88 0 19 5.22 No 33 1.75 Yes 0 0 No -27 0.7 Yes 25 82.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68657103 + NM_133509 RAD51B 0 . . . 0.01 65.43 23 6.21 Yes 53 0.81 Yes 0 0 No -22 0.67 Yes 26 87.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68912320 + NM_133509 RAD51B 0 . . . 4.6 80.63 20 4.28 No 20 0.34 No 0 0 No -26 0.93 Yes 45 71.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108215701 + NM_000051 ATM 0 . . . 4.01 79 22 4.8 No 8 0.6 No 0 0 No -21 0.78 Yes 50 57.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7588304 - NM_000546 TP53 0 . . . 2.73 74.79 22 3.98 No 36 1.16 Yes 0 0 No -29 0.27 No 50 71.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56803626 + NM_058216 RAD51C 0 . . . 1.2 71.62 25 4.9 No 24 0.46 No 0 0 No -24 0.84 Yes 43 47.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131948971 + NM_005732 RAD50 0 . . . 5.56 81.54 32 5.21 No 75 1.5 Yes 0 0 No -25 0.65 No 42 55.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69121125 + NM_133509 RAD51B 0 . . . 0.75 0 15 4.35 No 15 1.49 Yes 0 0 No -24 0.74 Yes 43 95.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89718505 + NM_000314 PTEN 0 . . . 6.13 82.04 13 5.23 No 66 0.92 Yes 0 0 No -42 0.54 No 51 40.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59916111 - NM_032043 BRIP1 0 . . . 9.94 93.34 17 4.8 No 44 2.05 Yes 0 0 No -24 0.45 No 30 77.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21994983 - NM_000077 CDKN2A 0 . . . 1.71 63.57 63 7.98 Yes 15 1.5 Yes 0 0 No -30 0.56 No 43 78.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75484846 - NM_001040108 MLH3 0 . . . 3.32 83.57 16 4.69 No 45 0.4 No 0 0 No -24 0.81 Yes 40 49.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47778211 + NM_000251 MSH2 0 . . . 5.46 82.43 36 7.38 Yes 35 1.01 Yes 0 0 No -36 0.44 No 23 89.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68377289 + NM_133509 RAD51B 0 . . . 1.64 72.01 27 3.96 No 6 0.9 Yes 0 0 No -19 0.52 No 45 65.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6036628 - NM_000535 PMS2 0 . . . 5.32 77.96 23 4.67 No 57 1.13 Yes 0 0 No -19 0.6 No 55 47.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59906473 - NM_032043 BRIP1 0 . . . 6.09 83.44 39 6.62 Yes 34 1.27 Yes 0 0 No -28 0.43 No 41 64.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47780704 + NM_000251 MSH2 0 . . . 6.91 79.78 24 5.81 Yes 72 -4.78 No 0 0 No -24 0.48 No 48 95.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75484821 - NM_001040108 MLH3 0 . . . 7.22 87.96 26 5.48 No 70 0.39 No 0 0 No -28 0.51 No 43 43.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47735390 + NM_000251 MSH2 0 . . . 5.11 79.99 30 4.15 No 6 0.67 No 0 0 No -29 0.66 No 46 61.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56771493 + NM_058216 RAD51C 0 . . . 4.78 75.49 10 4.8 No 2 0.81 Yes 0 0 No -21 0.54 No 44 55.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41014850 + NM_001164269 RAD51 0 . . . 2.49 63.13 18 5.74 Yes 73 -5.69 No 0 0 No -26 0.85 Yes 41 53.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108156351 + NM_000051 ATM 0 . . . 7.66 85.86 48 7.73 Yes 67 -4.45 No 0 0 No -38 0.45 No 48 90.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108209133 + NM_000051 ATM 0 . . . 0.6 74.68 28 6.16 Yes 63 0.49 No 0 0 No -24 0.68 Yes 46 74.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69082270 + NM_133509 RAD51B 0 . . . 2.18 73.32 22 4.56 No 30 1.09 Yes 0 0 No -26 0.66 No 28 86.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152353948 - NM_005431 XRCC2 0 . . . 7.14 85.39 20 4.9 No 49 0.46 No 0 0 No -17 0.8 Yes 47 76.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108150521 + NM_000051 ATM 0 . . . 0.03 58.88 27 5.39 No 28 0.33 No 0 0 No -26 0.59 No 26 62.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89670225 + NM_000314 PTEN 0 . . . 2.7 81.49 29 5.41 No 51 0.2 No 0 0 No -23 0.89 Yes 22 73.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59912726 - NM_032043 BRIP1 0 . . . 3.17 76.99 18 5.66 Yes 9 0.04 No 0 0 No -17 0.66 No 46 90.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68713711 + NM_133509 RAD51B 0 . . . 0.96 72.7 28 5.4 No 22 0.79 Yes 0 0 No -23 0.56 No 36 75.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56808830 + NM_058216 RAD51C 0 . . . 2 80.34 10 4 No 32 1.13 Yes 0 0 No -27 0.96 Yes 42 61.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48014576 + NM_000179 MSH6 0 . . . 0.27 0 22 4.69 No 67 -4.72 No 0 0 No -21 0.54 No 44 54.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59801844 - NM_032043 BRIP1 0 . . . 0.09 74.1 22 5.65 Yes 57 0.61 No 0 0 No -21 0.56 No 47 65.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68525396 + NM_133509 RAD51B 0 . . . 0.26 61.15 20 5.57 Yes 72 1.82 Yes 0 0 No -19 0.64 No 43 69.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68447907 + NM_133509 RAD51B 0 . . . 3.45 76.68 42 7.88 Yes -4 0.13 No 0 0 No -31 0.63 No 41 33.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68602838 + NM_133509 RAD51B 0 . . . 4.85 70.01 24 5.19 No 32 1.18 Yes 0 0 No -43 0.4 No 46 64.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152345054 - NM_005431 XRCC2 0 . . . 4.4 82.44 35 5.82 Yes 15 0.5 No 0 0 No -34 0.46 No 43 76.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59764231 - NM_032043 BRIP1 0 . . . 1.19 74.91 22 6.33 Yes 63 0.53 No 0 0 No -21 0.95 Yes 44 67.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108229101 + NM_000051 ATM 0 . . . 1.22 75.38 27 6.16 Yes 45 -2.64 No 0 0 No -31 0.57 No 50 46.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131946105 + NM_005732 RAD50 0 . . . 6.29 81.48 11 5 No 35 0.55 No 0 0 No -42 0.47 No 45 68.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190743898 + NM_000534 PMS1 0 . . . 0.36 0 16 5.39 No 66 -2.86 No 0 0 No -24 0.83 Yes 38 53.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68444598 + NM_133509 RAD51B 0 . . . 4.82 69.13 26 5.08 No 21 0.35 No 0 0 No -25 0.8 Yes 44 53.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68727951 + NM_133509 RAD51B 0 . . . 11.94 91.61 37 5.93 Yes 6 0.4 No 0 0 No -36 0.47 No 52 87.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41231116 - NM_007294 BRCA1 0 . . . 2.51 74.18 21 4.9 No 51 0.54 No 0 0 No -20 0.96 Yes 41 69.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190732343 + NM_000534 PMS1 0 . . . 3.85 78.21 32 6.5 Yes 33 0.3 No 0 0 No -29 0.68 Yes 44 63.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41022080 + NM_001164269 RAD51 0 . . . 1.88 76.38 25 6.33 Yes 40 1.13 Yes 0 0 No -32 0.48 No 18 35.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68737330 + NM_133509 RAD51B 0 . . . 2.23 67.75 41 6.86 Yes 3 0.55 No 0 0 No -40 0.76 Yes 49 69.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33426401 - NM_002878 RAD51D 0 . . . 3.5 77.34 16 5.49 No 55 -1.48 No 0 0 No -25 0.48 No 46 89.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68289852 + NM_133509 RAD51B 0 . . . 4.58 74 12 4.12 No 75 -4.13 No 0 0 No -37 0.41 No 48 73.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6021245 - NM_000535 PMS2 0 . . . 5.1 77.96 26 5.66 Yes 67 -4.33 No 0 0 No -29 0.55 No 44 86.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105189821 + NM_021930 RINT1 0 . . . 1.43 69.22 26 5.1 No 23 0.64 No 0 0 No -29 0.71 Yes 44 58.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68554190 + NM_133509 RAD51B 0 . . . 1.48 73.95 15 5.35 No 45 -4.25 No 0 0 No -30 0.52 No 39 81.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29096144 - NM_001005735 CHEK2 0 . . . 3.14 0 17 4.58 No 13 0.54 No 0 0 No -16 0.37 No 45 57.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40990700 + NM_001164269 RAD51 0 . . . 3.26 75.24 13 4.12 No 74 1.68 Yes 0 0 No -25 0.7 Yes 53 41.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32930921 + NM_000059 BRCA2 0 . . . 4.68 75.52 42 6.93 Yes 62 -2.37 No 0 0 No -41 0.36 No 50 67.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68312265 + NM_133509 RAD51B 0 . . . 3.71 69.48 45 8.87 Yes 47 0.24 No 0 0 No -24 0.53 No 37 55.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68881447 + NM_133509 RAD51B 0 . . . 1.34 68.7 31 6.48 Yes 34 0.47 No 0 0 No -30 0.92 Yes 46 45.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68459678 + NM_133509 RAD51B 0 . . . 0.33 54.3 18 5.77 Yes 47 1.37 Yes 0 0 No -25 0.52 No 30 78.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68439838 + NM_133509 RAD51B 0 . . . 2.19 65.64 30 5.01 No 75 -6.15 No 0 0 No -29 0.56 No 51 53.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68331213 + NM_133509 RAD51B 0 . . . 0.87 73.36 42 6.55 Yes 26 -3.67 No 0 0 No -28 0.76 Yes 40 59.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215620096 - NM_000465 BARD1 0 . . . 2.57 72.1 43 7.05 Yes 74 1.1 Yes 0 0 No -34 0.35 No 63 37.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131958436 + NM_005732 RAD50 0 . . . 7.43 76.57 24 5.92 Yes 2 0.97 Yes 0 0 No -23 0.8 Yes 26 51.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48008425 + NM_000179 MSH6 0 . . . 5.15 82.38 20 5.1 No 74 0.86 Yes 0 0 No -19 0.76 Yes 45 51.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21977883 - NM_000077 CDKN2A 0 . . . 2.38 75.82 40 5.89 Yes 63 0.18 No 0 0 No -39 0.59 No 42 81.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45803309 - NM_001048171 MUTYH 0 . . . 5.25 87.48 18 5.89 Yes 32 0.95 Yes 0 0 No -17 0.4 No 51 88.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69119806 + NM_133509 RAD51B 0 . . . 2.99 69.34 38 7.01 Yes 0 1.09 Yes 0 0 No -29 0.89 Yes 18 56.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68951722 + NM_133509 RAD51B 0 . . . 3.05 65.41 52 7.09 Yes 72 0.75 No 0 0 No -39 0.41 No 49 75.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68346599 + NM_133509 RAD51B 0 . . . 4.62 77.5 21 4.85 No 37 -2.98 No 0 0 No -20 0.41 No 42 69.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59878983 - NM_032043 BRIP1 0 . . . 0.78 68.34 17 6.11 Yes 34 -2.99 No 0 0 No -22 0.62 No 41 90.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68619490 + NM_133509 RAD51B 0 . . . 6.06 81.66 17 4.8 No 54 1.71 Yes 0 0 No -16 0.45 No 12 48.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59862575 - NM_032043 BRIP1 0 . . . 1.76 71.44 14 4.47 No 52 0.69 No 0 0 No -43 0.81 Yes 47 86.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52444434 - NM_004656 BAP1 0 . . . 8.61 77.68 21 4.69 No NA NA NA 0 0 No -20 0.92 Yes 50 80.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69060605 + NM_133509 RAD51B 0 . . . 2.05 75.08 27 5.2 No 0 0.78 Yes 0 0 No -24 0.51 No 54 73.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56781378 + NM_058216 RAD51C 0 . . . 0.36 0 21 4.68 No 75 1.14 Yes 0 0 No -20 0.85 Yes 43 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68329813 + NM_133509 RAD51B 0 . . . 2.71 80.48 32 5.27 No 14 0.66 No 0 0 No -21 0.5 No 44 94.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89648658 + NM_000314 PTEN 0 . . . 2.2 63.47 19 4.98 No 19 1.1 Yes 0 0 No -28 0.24 No 39 86.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68920545 + NM_133509 RAD51B 0 . . . 4.77 70.82 20 5.1 No 1 0.92 Yes 0 0 No -54 0.91 Yes 45 65.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37040743 + NM_000249 MLH1 0 . . . 4.8 90.18 28 6.48 Yes 49 0.79 Yes 0 0 No -27 0.95 Yes 37 72.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104180704 - NM_001100119 XRCC3 0 . . . 0.01 74.27 18 4.9 No 46 -0.98 No 0 0 No -26 0.75 Yes 25 69.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68780080 + NM_133509 RAD51B 0 . . . 3.48 72.45 19 4.42 No 10 1.14 Yes 0 0 No -18 0.56 No 48 62.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32908370 + NM_000059 BRCA2 0 . . . 4.12 80.71 13 4.8 No 1 0.96 Yes 0 0 No -44 0.47 No 44 59.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69059625 + NM_133509 RAD51B 0 . . . 1.09 0 25 3.93 No 16 0.57 No 0 0 No -24 0.51 No 38 61.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68917349 + NM_133509 RAD51B 0 . . . 2.44 0 19 5.42 No 74 1.39 Yes 0 0 No -24 0.57 No 42 68.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69043468 + NM_133509 RAD51B 0 . . . 3.61 80.55 27 6.25 Yes 40 2.12 Yes 0 0 No -26 0.85 Yes 18 41.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94158545 - NM_005591 MRE11 0 . . . 3.61 80.75 15 4.86 No 9 0.44 No 0 0 No -21 0.71 Yes 48 91.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90944738 - NM_002485 NBN 0 . . . 2.07 0 33 7.99 Yes 70 0.43 No 0 0 No -27 0.78 Yes 30 92.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68799794 + NM_133509 RAD51B 0 . . . 1.79 65.25 33 4.19 No 5 -1.63 No 0 0 No -33 0.43 No 53 21.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59836660 - NM_032043 BRIP1 0 . . . 1.69 0 19 5.19 No 44 1.58 Yes 0 0 No -18 0.47 No 28 58.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21975697 - NM_000077 CDKN2A 0 . . . 10.7 92.21 17 4.22 No 19 1.82 Yes 0 0 No -23 0.31 No 39 65.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68631624 + NM_133509 RAD51B 0 . . . 5.34 82.84 9 4.8 No 39 1.14 Yes 0 0 No -20 0.55 No 53 68.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94207700 - NM_005591 MRE11 0 . . . 2.76 70.06 14 5.92 Yes 31 0.86 Yes 0 0 No -23 0.26 No 46 88.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108156228 + NM_000051 ATM 0 . . . 2.65 68.11 16 5.48 No 57 0.37 No 0 0 No -47 0.38 No 46 65.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69073569 + NM_133509 RAD51B 0 . . . 5.75 68.01 39 5.36 No 11 1.25 Yes 0 0 No -38 0.74 Yes 47 91.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68778336 + NM_004360 CDH1 0 . . . 7.46 73.64 30 5 No 17 2.08 Yes 0 0 No -58 0.32 No 41 95.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89726275 + NM_000314 PTEN 0 . . . 2.99 64.72 19 4.89 No 52 0.79 Yes 0 0 No -22 0.54 No 31 42.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68470726 + NM_133509 RAD51B 0 . . . 4.99 70.48 32 5.11 No 1 0.93 Yes 0 0 No -31 0.76 Yes 39 43.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190702135 + NM_000534 PMS1 0 . . . 3.53 87.45 25 5.2 No 30 0.83 Yes 0 0 No -24 0.82 Yes 50 65.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59786259 - NM_032043 BRIP1 0 . . . 11.02 91.59 22 5.29 No 21 0.91 Yes 0 0 No -24 0.25 No 45 46.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131976026 + NM_005732 RAD50 0 . . . 6.26 92.44 13 5.29 No 49 1.4 Yes 0 0 No -36 0.49 No 52 45.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90974475 - NM_002485 NBN 0 . . . 1.09 76.25 15 5.59 Yes 44 0.84 Yes 0 0 No -25 0.63 No 51 90.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59883965 - NM_032043 BRIP1 0 . . . 6.47 73.26 18 5.26 No 64 -2.86 No 0 0 No -20 0.49 No 46 40.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41239578 - NM_007294 BRCA1 0 . . . 3.01 84.22 18 4.04 No 33 1.68 Yes 0 0 No -17 0.45 No 50 57.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131923059 + NM_005732 RAD50 0 . . . 8.35 78.55 20 6.74 Yes 67 1.03 Yes 0 0 No -29 0.31 No 49 73.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68346470 + NM_133509 RAD51B 0 . . . 6.72 81.82 24 5.29 No 8 1.37 Yes 0 0 No -23 0.92 Yes 50 69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59880711 - NM_032043 BRIP1 0 . . . 5.29 78.33 36 6.86 Yes 55 0.79 Yes 0 0 No -35 0.91 Yes 53 82.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59853804 - NM_032043 BRIP1 0 . . . 6.98 79.45 17 5.56 Yes 1 -1.36 No 0 0 No -24 0.55 No 45 69.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1214350 + NM_000455 STK11 0 . . . 5.45 81.64 33 5.89 Yes -2 -1.9 No 0 0 No -29 0.73 Yes 38 33.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68327796 + NM_133509 RAD51B 0 . . . 0.11 0 35 4.64 No 8 1.15 Yes 0 0 No -25 0.78 Yes 50 47.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131954650 + NM_005732 RAD50 0 . . . 4.91 75.26 10 5.43 No 60 1 Yes 0 0 No -32 0.74 Yes 32 56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90977149 - NM_002485 NBN 0 . . . 1.1 74.73 23 5.13 No 33 1.02 Yes 0 0 No -25 0.79 Yes 16 62.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59916692 - NM_032043 BRIP1 0 . . . 4.59 58.34 31 5.46 No 33 0.72 No 0 0 No -25 0.71 Yes 37 56.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47629311 + NM_000251 MSH2 0 . . . 3 0 27 5.2 No 51 0.59 No 0 0 No -26 0.66 No 44 80.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108185922 + NM_000051 ATM 0 . . . 3.27 73.38 19 5 No 70 0.02 No 0 0 No -23 0.83 Yes 46 52.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68604488 + NM_133509 RAD51B 0 . . . 0.35 57.9 23 5.28 No 39 0.6 No 0 0 No -30 0.23 No 44 27.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68480362 + NM_133509 RAD51B 0 . . . 3.33 72.53 28 5.06 No 40 0.88 Yes 0 0 No -27 0.89 Yes 47 86.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190706632 + NM_000534 PMS1 0 . . . 10.35 82.98 35 7.68 Yes 33 0.54 No 0 0 No -33 0.64 No 42 43.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131934389 + NM_005732 RAD50 0 . . . 3.23 65.19 10 4.57 No 38 1.32 Yes 0 0 No -26 0.33 No 20 81.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29136726 - NM_001005735 CHEK2 0 . . . 5.18 77.54 21 7.21 Yes 71 1.12 Yes 0 0 No -20 0.84 Yes 45 56.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108204856 + NM_000051 ATM 0 . . . 3.5 74.88 22 4.9 No 12 0.33 No 0 0 No -21 0.92 Yes 46 88.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56796071 + NM_058216 RAD51C 0 . . . 5.84 67.59 10 4 No -4 0.54 No 0 0 No -31 0.81 Yes 42 34.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68597728 + NM_133509 RAD51B 0 . . . 3.03 58.83 31 5.61 Yes 16 0.32 No 0 0 No -30 0.69 Yes 42 95.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68481847 + NM_133509 RAD51B 0 . . . 4.51 81.32 12 3.18 No 5 0.82 Yes 0 0 No -16 0.46 No 53 49.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89625545 + NM_000314 PTEN 0 . . . 3.01 84.25 27 6.31 Yes -2 0.23 No 0 0 No -26 0.68 Yes 46 92.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68799628 + NM_133509 RAD51B 0 . . . 5.92 77.36 39 6.87 Yes 61 0.38 No 0 0 No -26 0.7 Yes 36 49.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84394678 - NM_139076 FAM175A 0 . . . 2.86 72.14 29 7 Yes 69 -5.75 No 0 0 No -28 0.96 Yes 45 75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68534940 + NM_133509 RAD51B 0 . . . 4.85 70.32 35 6.4 Yes 34 -4.3 No 0 0 No -28 0.36 No 45 43.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41263373 - NM_007294 BRCA1 0 . . . 3.6 85.02 21 4.9 No 4 1.2 Yes 0 0 No -20 0.44 No 54 65.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69078182 + NM_133509 RAD51B 0 . . . 6.99 87.02 29 6.16 Yes -1 0.62 No 0 0 No -28 0.83 Yes 47 63.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68592227 + NM_133509 RAD51B 0 . . . 3.96 69.33 31 6.99 Yes 35 0.9 Yes 0 0 No -30 0.88 Yes 53 48.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68918537 + NM_133509 RAD51B 0 . . . 2.73 64.56 52 8.32 Yes 13 0.78 Yes 0 0 No -27 0.87 Yes 45 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68739045 + NM_133509 RAD51B 0 . . . 5.74 78.14 29 5.47 No 8 0.68 No 0 0 No -46 0.44 No 50 83.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131909946 + NM_005732 RAD50 0 . . . 0.11 0 28 5.29 No 61 -0.14 No 0 0 No -27 0.53 No 46 65.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68547128 + NM_133509 RAD51B 0 . . . 4.32 70.03 28 4.12 No 60 0.28 No 0 0 No -24 0.74 Yes 50 49.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152371596 - NM_005431 XRCC2 0 . . . 1.06 84.22 14 4.26 No 33 0.98 Yes 0 0 No -19 0.49 No 25 54.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104173799 - NM_001100119 XRCC3 0 . . . 7.84 77.45 25 4.99 No 54 -4.26 No 0 0 No -20 0.59 No 40 78.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47663972 + NM_000251 MSH2 0 . . . 2.5 71.63 22 5.1 No 46 1.08 Yes 0 0 No -21 0.47 No 54 50.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190695612 + NM_000534 PMS1 0 . . . 4.32 78.72 22 4.49 No -3 0.33 No 0 0 No -25 0.74 Yes 47 54.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69024826 + NM_133509 RAD51B 0 . . . 9.49 88.35 11 3.87 No 3 1.01 Yes 0 0 No -22 0.55 No 27 90.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68679278 + NM_133509 RAD51B 0 . . . 2.36 70.77 17 5.92 Yes 22 1.86 Yes 0 0 No -26 0.41 No 40 71.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68502588 + NM_133509 RAD51B 0 . . . 5.37 73.2 27 5.29 No 18 1.24 Yes 0 0 No -21 0.82 Yes 48 84.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94215208 - NM_005591 MRE11 0 . . . 7.5 86.74 53 6.77 Yes 7 1.22 Yes 0 0 No -21 0.51 No 51 67.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41269980 - NM_007294 BRCA1 0 . . . 4.9 68.43 20 5.1 No 65 1.64 Yes 0 0 No -16 0.2 No 42 49.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47774947 + NM_000251 MSH2 0 . . . 2.03 75.25 20 4.86 No 19 -3.37 No 0 0 No -23 0.55 No 14 36.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68686334 + NM_133509 RAD51B 0 . . . 1.89 0 27 6.99 Yes 7 -0.02 No 0 0 No -26 0.66 No 51 49.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69129602 + NM_133509 RAD51B 0 . . . 7.62 81.76 31 8.46 Yes 26 0.16 No 0 0 No -31 0.75 Yes 36 75.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215648895 - NM_000465 BARD1 0 . . . 4.16 68.95 19 6.31 Yes 13 0.59 No 0 0 No -26 0.48 No 36 76.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69133534 + NM_133509 RAD51B 0 . . . 9.88 86.8 25 5.56 Yes 10 1.03 Yes 0 0 No -24 0.9 Yes 48 56.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41016135 + NM_001164269 RAD51 0 . . . 0.05 62.35 17 6.4 Yes 28 0.74 No 0 0 No -16 0.79 Yes 19 84.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215604956 - NM_000465 BARD1 0 . . . 0.33 67.38 22 5.59 Yes 27 0.78 Yes 0 0 No -21 0.65 No 36 61.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1229946 + NM_000455 STK11 0 . . . 0.19 71.99 34 6.14 Yes 50 0.73 No 0 0 No -33 0.71 Yes 43 32.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94149023 - NM_005591 MRE11 0 . . . 2.09 80.22 18 5.14 No 67 -4.95 No 0 0 No -51 0.32 No 48 86.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94204617 - NM_005591 MRE11 0 . . . 4.54 71.28 26 6.07 Yes 16 1.7 Yes 0 0 No -25 0.88 Yes 42 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7570449 - NM_000546 TP53 0 . . . 1.13 64.32 27 5.2 No 57 -4.37 No 0 0 No -26 0.53 No 42 26.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90976672 - NM_002485 NBN 0 . . . 1.93 65.45 17 6.93 Yes 6 0.84 Yes 0 0 No -27 0.59 No 42 43.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47740935 + NM_000251 MSH2 0 . . . 7.31 85.08 24 5.38 No 21 0.84 Yes 0 0 No -24 0.53 No 37 68.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59940715 - NM_032043 BRIP1 0 . . . 7.09 91.07 24 6.75 Yes 0 -0.95 No 0 0 No -23 0.91 Yes 45 79.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68294095 + NM_133509 RAD51B 0 . . . 2.78 71.62 15 4.58 No 43 0.61 No 0 0 No -44 0.33 No 46 44.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59844417 - NM_032043 BRIP1 0 . . . 8.88 84.47 24 5.13 No 75 1.11 Yes 0 0 No -13 0.5 No 41 97.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69103504 + NM_133509 RAD51B 0 . . . 3.92 68.7 25 5.19 No 43 0.78 Yes 0 0 No -24 0.84 Yes 44 45.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215654168 - NM_000465 BARD1 0 . . . 1.06 83.33 9 4.69 No 40 -1.99 No 0 0 No -49 0.35 No 50 85.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108151627 + NM_000051 ATM 0 . . . 2.8 61.54 17 4.57 No 53 0.97 Yes 0 0 No -43 0.51 No 43 63.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75488201 - NM_001040108 MLH3 0 . . . 9.6 85.38 17 5.29 No 13 1.06 Yes 0 0 No -21 0.4 No 45 96.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47712118 + NM_000251 MSH2 0 . . . 1.6 64.91 38 7.28 Yes 6 0.17 No 0 0 No -37 0.92 Yes 45 60.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69018312 + NM_133509 RAD51B 0 . . . 4.67 87.31 15 5.73 Yes 37 1.23 Yes 0 0 No -28 0.29 No 53 66.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94157829 - NM_005591 MRE11 0 . . . 5.33 87.96 96 9.77 Yes 73 0.82 Yes 0 0 No -38 0.1 No 50 78.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48029495 + NM_000179 MSH6 0 . . . 0.78 81.8 31 5.72 Yes -1 0.29 No 0 0 No -30 0.91 Yes 40 92.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32916763 + NM_000059 BRCA2 0 . . . 2.16 66.06 14 4.9 No 69 -5.41 No 0 0 No -25 0.57 No 48 80.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215672234 - NM_000465 BARD1 0 . . . 1.87 64.24 17 4.67 No 74 0.41 No 0 0 No -23 0.42 No 43 33.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69096715 + NM_133509 RAD51B 0 . . . 3.48 68.5 11 4.98 No 17 0.91 Yes 0 0 No -44 0.49 No 41 73.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6035469 - NM_000535 PMS2 0 . . . 3.6 79.17 9 4.47 No 63 -5.87 No 0 0 No -19 0.54 No 41 64.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32917295 + NM_000059 BRCA2 0 . . . 0.11 64.18 24 6.24 Yes -2 0.26 No 0 0 No -23 0.77 Yes 34 79.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105179634 + NM_021930 RINT1 0 . . . 6.68 75.77 22 4.78 No 1 1.5 Yes 0 0 No -41 0.47 No 53 47.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32916381 + NM_000059 BRCA2 0 . . . 2.4 81.5 30 4.36 No 10 1.12 Yes 0 0 No -29 0.38 No 48 90.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90977374 - NM_002485 NBN 0 . . . 0.44 75.5 16 4.82 No 34 0.13 No 0 0 No -19 0.61 No 47 64.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68787218 + NM_133509 RAD51B 0 . . . 0.52 69.54 27 5.49 No 68 -4.84 No 0 0 No -27 0.38 No 43 94.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68689442 + NM_133509 RAD51B 0 . . . 6.47 71.63 19 4.9 No 74 1.03 Yes 0 0 No -25 0.19 No 35 60.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47648797 + NM_000251 MSH2 0 . . . 1.87 80.2 22 5.15 No 70 0.98 Yes 0 0 No -18 0.38 No 48 54.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68724466 + NM_133509 RAD51B 0 . . . 5.11 66.7 52 6.53 Yes 51 0.14 No 0 0 No -32 0.57 No 45 59.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59837759 - NM_032043 BRIP1 0 . . . 5.43 66.45 30 3.66 No 75 2.11 Yes 0 0 No -22 0.82 Yes 30 75.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215645396 - NM_000465 BARD1 0 . . . 0.3 66.28 43 6.46 Yes 46 0.6 No 0 0 No -23 0.61 No 40 43.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68721440 + NM_133509 RAD51B 0 . . . 4.26 73.84 25 5.1 No 15 0.64 No 0 0 No -24 0.93 Yes 43 63.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59800173 - NM_032043 BRIP1 0 . . . 0.21 59.55 34 5.2 No 47 -5.2 No 0 0 No -33 0.65 No 53 20.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6014043 - NM_000535 PMS2 0 . . . 2.34 73.87 26 5.47 No 64 1.35 Yes 0 0 No -25 0.52 No 34 39.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68721012 + NM_133509 RAD51B 0 . . . 1.54 73.35 32 5.99 Yes 2 0.17 No 0 0 No -22 0.41 No 46 85.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68735838 + NM_133509 RAD51B 0 . . . 8.99 90.61 13 6.32 Yes 7 0.37 No 0 0 No -25 0.9 Yes 48 80.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68456759 + NM_133509 RAD51B 0 . . . 6.63 87.44 34 6.2 Yes 41 1.4 Yes 0 0 No -17 0.58 No 17 83.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94187792 - NM_005591 MRE11 0 . . . 0.97 0 20 5.1 No 2 0.22 No 0 0 No -19 0.24 No 56 52.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131922853 + NM_005732 RAD50 0 . . . 6.25 78.51 28 5.66 Yes 1 0.17 No 0 0 No -31 0.59 No 39 58.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75488500 - NM_001040108 MLH3 0 . . . 1.86 57.31 25 5.57 Yes 43 0.58 No 0 0 No -24 0.8 Yes 45 21.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68914360 + NM_133509 RAD51B 0 . . . 1 64.72 33 6.16 Yes 23 0.47 No 0 0 No -32 0.82 Yes 29 71.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89676955 + NM_000314 PTEN 0 . . . 5.63 75.05 73 6.49 Yes 30 1.27 Yes 0 0 No -34 0.64 No 28 88.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94203459 - NM_005591 MRE11 0 . . . 3.12 82.63 25 5.38 No 25 0.58 No 0 0 No -29 0.46 No 43 85.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47661364 + NM_000251 MSH2 0 . . . 0.56 73.95 70 8.54 Yes 10 -1.02 No 0 0 No -30 0.8 Yes 48 61.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41000450 + NM_001164269 RAD51 0 . . . 6.26 88.76 13 5.4 No 57 1.04 Yes 0 0 No -25 0.79 Yes 46 87.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68409939 + NM_133509 RAD51B 0 . . . 2.95 78.59 19 5.47 No 74 -3.01 No 0 0 No -23 0.55 No 50 51.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59865936 - NM_032043 BRIP1 0 . . . 1.14 67.2 43 7.11 Yes 19 0.66 No 0 0 No -47 0.38 No 39 83.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89716189 + NM_000314 PTEN 0 . . . 4.91 72.36 28 4.6 No 0 0.4 No 0 0 No -27 0.87 Yes 43 85.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68749395 + NM_133509 RAD51B 0 . . . 5.79 77.77 16 4.69 No 8 1.17 Yes 0 0 No -39 0.33 No 50 91.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215657412 - NM_000465 BARD1 0 . . . 1.93 0 14 6.71 Yes 17 0.6 No 0 0 No -24 0.62 No 54 38.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37083367 + NM_000249 MLH1 0 . . . 1.37 68.46 27 5.72 Yes 66 0.61 No 0 0 No -26 0.82 Yes 46 67.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94203406 - NM_005591 MRE11 0 . . . 5.85 75.55 21 4.5 No 2 0.55 No 0 0 No -36 0.8 Yes 46 68.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215644651 - NM_000465 BARD1 0 . . . 2.38 69.12 29 6.56 Yes 74 1.86 Yes 0 0 No -28 0.83 Yes 36 68.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59774246 - NM_032043 BRIP1 0 . . . 4.42 84.22 34 6.24 Yes 8 1.13 Yes 0 0 No -33 0.64 No 50 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75511462 - NM_001040108 MLH3 0 . . . 2.27 78.6 40 6.4 Yes 18 1.12 Yes 0 0 No -37 0.67 Yes 40 53.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68809112 + NM_004360 CDH1 0 . . . 6.42 71.14 13 3.69 No 27 0.72 No 0 0 No -20 0.58 No 31 85.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29127341 - NM_001005735 CHEK2 0 . . . 2.57 70.85 13 5.29 No 23 1.57 Yes 0 0 No -24 0.68 Yes 35 59.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29130323 - NM_001005735 CHEK2 0 . . . 1.91 0 22 5.97 Yes 53 0.53 No 0 0 No -26 0.5 No 50 96.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68331437 + NM_133509 RAD51B 0 . . . 5.01 78.8 24 4.66 No 12 0.59 No 0 0 No -23 0.88 Yes 46 40.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47771600 + NM_000251 MSH2 0 . . . 2.21 0 16 5.36 No 65 0.48 No 0 0 No -29 0.51 No 29 61.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40991522 + NM_001164269 RAD51 0 . . . 2.81 85.02 36 5.67 Yes 3 1.02 Yes 0 0 No -24 0.61 No 46 55.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47674579 + NM_000251 MSH2 0 . . . 2.41 68.34 21 5.64 Yes 32 0.69 No 0 0 No -20 0.48 No 45 68.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41242191 - NM_007294 BRCA1 0 . . . 1.27 74.57 13 5.04 No 5 0.27 No 0 0 No -12 0.5 No 53 80.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69125913 + NM_133509 RAD51B 0 . . . 2.75 0 15 4 No 47 1.79 Yes 0 0 No -26 0.65 No 11 59.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68925592 + NM_133509 RAD51B 0 . . . 8.21 90.87 13 4.31 No 53 0.71 No 0 0 No -23 0.55 No 49 75.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68318683 + NM_133509 RAD51B 0 . . . 5.7 80.07 17 4.58 No 44 -2.46 No 0 0 No -19 0.68 Yes 44 43.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47780198 + NM_000251 MSH2 0 . . . 1.85 66.58 35 6.4 Yes 47 0.67 No 0 0 No -34 0.55 No 50 74.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68831559 + NM_004360 CDH1 0 . . . 9.33 76.79 27 5.29 No 72 -4.16 No 0 0 No -26 0.87 Yes 50 69.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68470280 + NM_133509 RAD51B 0 . . . 1.42 67.45 27 5.53 No 73 1.17 Yes 0 0 No -24 0.67 Yes 15 55.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6036409 - NM_000535 PMS2 0 . . . 1.1 0 9 4.69 No 5 0.35 No 0 0 No -18 0.46 No 53 63.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68805167 + NM_133509 RAD51B 0 . . . 5.64 73.17 22 5.29 No 65 0.76 No 0 0 No -47 0.64 No 45 74.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108139299 + NM_000051 ATM 0 . . . 4.6 73.91 30 5.47 No 65 1.04 Yes 0 0 No -29 0.91 Yes 53 75.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47786961 + NM_000251 MSH2 0 . . . 0.11 0 20 5.57 Yes 42 -2.17 No 0 0 No -19 0.67 Yes 51 92.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56806815 + NM_058216 RAD51C 0 . . . 7.21 85.22 22 7.28 Yes 59 1.2 Yes 0 0 No -21 0.8 Yes 43 55.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6032082 - NM_000535 PMS2 0 . . . 2.01 74.68 36 6.35 Yes 53 0.64 No 0 0 No -35 0.64 No 44 68.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215670865 - NM_000465 BARD1 0 . . . 4.05 73.69 34 3.97 No 32 0.98 Yes 0 0 No -24 0.71 Yes 44 69.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69125303 + NM_133509 RAD51B 0 . . . 3.79 72.86 15 4.58 No 15 1.14 Yes 0 0 No -31 0.66 No 43 65.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29095616 - NM_001005735 CHEK2 0 . . . 0.69 70.87 34 8.99 Yes 25 0.4 No 0 0 No -33 0.54 No 54 48.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69121676 + NM_133509 RAD51B 0 . . . 11.24 87.38 23 5.61 Yes 32 0.8 Yes 0 0 No -25 0.68 Yes 44 88.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108207270 + NM_000051 ATM 0 . . . 4.23 68.4 35 6.86 Yes 76 1.05 Yes 0 0 No -33 0.46 No 43 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69017029 + NM_133509 RAD51B 0 . . . 0.06 0 30 6 Yes 65 0.22 No 0 0 No -29 0.84 Yes 46 61.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37071753 + NM_000249 MLH1 0 . . . 1.36 73.78 46 5.77 Yes -1 1.37 Yes 0 0 No -46 0.68 Yes 52 59.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48027499 + NM_000179 MSH6 0 . . . 4.19 68.31 55 7.29 Yes 43 0.62 No 0 0 No -19 0.74 Yes 43 70 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68352260 + NM_133509 RAD51B 0 . . . 0.92 74.42 20 4.9 No 67 1.16 Yes 0 0 No -19 0.81 Yes 58 28.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68433045 + NM_133509 RAD51B 0 . . . 0.63 77.32 36 5.8 Yes 68 -5.36 No 0 0 No -25 0.6 No 54 57.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68512687 + NM_133509 RAD51B 0 . . . 3.22 74.05 16 4.69 No 14 1.04 Yes 0 0 No -22 0.47 No 44 93.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215632497 - NM_000465 BARD1 0 . . . 0.02 0 31 4.61 No 31 1.3 Yes 0 0 No -22 0.72 Yes 49 85.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59905752 - NM_032043 BRIP1 0 . . . 1.85 0 21 5.2 No 26 0.39 No 0 0 No -20 0.4 No 29 77.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68545400 + NM_133509 RAD51B 0 . . . 0.99 77 24 5.48 No 44 0.44 No 0 0 No -23 0.71 Yes 47 38.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69053473 + NM_133509 RAD51B 0 . . . 3.27 77.58 20 4.36 No 50 0.27 No 0 0 No -19 0.72 Yes 34 47.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23625045 - NM_024675 PALB2 0 . . . 2.15 76.12 25 5 No -4 0.24 No 0 0 No -24 0.79 Yes 34 75.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108207709 + NM_000051 ATM 0 . . . 5.8 75.08 29 5.47 No 43 0.75 No 0 0 No -28 0.48 No 33 88.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68901347 + NM_133509 RAD51B 0 . . . 7.18 87.61 43 6.63 Yes 2 1.56 Yes 0 0 No -37 0.64 No 52 55.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68364215 + NM_133509 RAD51B 0 . . . 5.5 82.78 14 7.58 Yes 50 -4.61 No 0 0 No -26 0.8 Yes 43 88.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108182685 + NM_000051 ATM 0 . . . 0.6 0 18 5.29 No 25 1.46 Yes 0 0 No -24 0.55 No 27 36.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69017338 + NM_133509 RAD51B 0 . . . 3.17 83.71 20 4.9 No 57 0.37 No 0 0 No -19 0.67 Yes 51 68.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40991922 + NM_001164269 RAD51 0 . . . 4.27 78.27 37 7.19 Yes 76 -2.49 No 0 0 No -36 0.52 No 37 83.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56768747 + NM_058216 RAD51C 0 . . . 3.44 81.93 15 5.17 No 12 -2.39 No 0 0 No -22 0.68 Yes 53 55.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68389803 + NM_133509 RAD51B 0 . . . 1.47 0 25 3.82 No 60 1.66 Yes 0 0 No -27 0.92 Yes 36 91.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41231961 - NM_007294 BRCA1 0 . . . 10.54 92.81 27 5.63 Yes 48 -2.29 No 0 0 No -26 0.49 No 45 78.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68776661 + NM_133509 RAD51B 0 . . . 2.49 66.67 20 5.57 Yes 75 -4.9 No 0 0 No -26 0.64 No 43 81.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47805729 + NM_000251 MSH2 0 . . . 0.52 64.1 18 7.55 Yes 73 0.62 No 0 0 No -17 0.38 No 45 42.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47716744 + NM_000251 MSH2 0 . . . 4.08 74.82 19 5 No 71 0.59 No 0 0 No -18 0.74 Yes 52 69.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131936221 + NM_005732 RAD50 0 . . . 3.63 80.67 17 7.48 Yes 20 0.52 No 0 0 No -27 0.75 Yes 38 88.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94204238 - NM_005591 MRE11 0 . . . 1.41 64.82 13 4.88 No 55 0.68 No 0 0 No -23 0.82 Yes 51 50.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90950425 - NM_002485 NBN 0 . . . 8.71 79.67 23 5.94 Yes 6 1.03 Yes 0 0 No -22 0.71 Yes 45 48.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131956463 + NM_005732 RAD50 0 . . . 0.17 67.33 28 12.04 Yes 10 1.04 Yes 0 0 No -27 0.55 No 48 65.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68776498 + NM_004360 CDH1 0 . . . 0.6 67.36 30 5.41 No 66 -3.82 No 0 0 No -24 0.73 Yes 56 51.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131950304 + NM_005732 RAD50 0 . . . 7.87 78.48 23 3.91 No 6 1.21 Yes 0 0 No -23 0.64 No 38 57.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47651581 + NM_000251 MSH2 0 . . . 1.12 75.18 21 5.01 No 33 1.16 Yes 0 0 No -20 0.49 No 25 50.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90994567 - NM_002485 NBN 0 . . . 3.7 60.37 24 6.4 Yes 31 1.34 Yes 0 0 No -23 0.86 Yes 48 44.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131952154 + NM_005732 RAD50 0 . . . 3.81 77.87 16 4 No 73 -5.16 No 0 0 No -15 0.82 Yes 46 70.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32951907 + NM_000059 BRCA2 0 . . . 1.74 66.65 11 4.12 No 33 0.73 No 0 0 No -25 0.35 No 49 66.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47709170 + NM_000251 MSH2 0 . . . 0.42 69.96 30 4.02 No 64 0.71 No 0 0 No -34 0.56 No 45 79.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68502804 + NM_133509 RAD51B 0 . . . 6.01 82.61 21 3.87 No 7 1.25 Yes 0 0 No -20 0.68 Yes 45 82.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68356202 + NM_133509 RAD51B 0 . . . 4.65 0 35 4.63 No 30 0.68 No 0 0 No -34 0.63 No 28 55.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68846431 + NM_004360 CDH1 0 . . . 4.11 75.65 17 6.46 Yes 5 0.83 Yes 0 0 No -26 0.41 No 40 52.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59844338 - NM_032043 BRIP1 0 . . . 2.91 76.32 41 6.96 Yes 6 1.24 Yes 0 0 No -40 0.85 Yes 46 53.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68851744 + NM_004360 CDH1 0 . . . 1.71 73.29 19 5.39 No 65 -5.68 No 0 0 No -42 0.82 Yes 40 51.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190729956 + NM_000534 PMS1 0 . . . 1.65 63.7 61 7.81 Yes 46 0.3 No 0 0 No -24 0.4 No 38 42.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69028154 + NM_133509 RAD51B 0 . . . 2.53 83.54 22 5.73 Yes 60 -4.4 No 0 0 No -21 0.81 Yes 47 48.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59804734 - NM_032043 BRIP1 0 . . . 1.53 0 25 6.16 Yes 11 0.09 No 0 0 No -24 0.84 Yes 47 47.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68847903 + NM_133509 RAD51B 0 . . . 1.45 0 48 7.35 Yes 43 0.66 No 0 0 No -47 0.58 No 48 84.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21988494 - NM_000077 CDKN2A 0 . . . 2.2 0 21 4.95 No 65 0.82 Yes 0 0 No -18 0.47 No 48 91.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68490640 + NM_133509 RAD51B 0 . . . 3.88 91.32 24 5.48 No 4 0.89 Yes 0 0 No -23 0.56 No 49 85.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68369402 + NM_133509 RAD51B 0 . . . 3.33 65.63 18 4.58 No 12 0.67 No 0 0 No -17 0.9 Yes 46 71.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68873045 + NM_133509 RAD51B 0 . . . 0.33 74.75 28 5.11 No 68 -5.83 No 0 0 No -28 0.9 Yes 52 21.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68844793 + NM_004360 CDH1 0 . . . 7.17 94.48 23 5.18 No 33 0.44 No 0 0 No -22 0.8 Yes 45 91.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41212222 - NM_007294 BRCA1 0 . . . 3.27 77.96 41 6.3 Yes 59 0.41 No 0 0 No -29 0.62 No 41 28.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89683064 + NM_000314 PTEN 0 . . . 3.53 67.63 26 5.29 No 20 -2.04 No 0 0 No -25 0.89 Yes 26 61.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23651162 - NM_024675 PALB2 0 . . . 5.24 83.29 24 5.43 No 59 0.23 No 0 0 No -23 0.85 Yes 49 64.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68687217 + NM_133509 RAD51B 0 . . . 1.46 66.3 40 4.62 No 0 0.04 No 0 0 No -28 0.5 No 42 67.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47739235 + NM_000251 MSH2 0 . . . 1.94 83.09 41 5.52 No 40 0.45 No 0 0 No -23 0.39 No 18 78.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68899638 + NM_133509 RAD51B 0 . . . 6.72 0 18 5.74 Yes 55 -1.13 No 0 0 No -26 0.78 Yes 36 67.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108103866 + NM_000051 ATM 0 . . . 3.39 77.98 24 5.48 No 37 1.58 Yes 0 0 No -21 0.57 No 31 68.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47738871 + NM_000251 MSH2 0 . . . 7.79 82.29 39 6.55 Yes 24 0.09 No 0 0 No -33 0.61 No 44 50.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52443664 - NM_004656 BAP1 0 . . . 8.68 85.61 21 5.83 Yes 76 0.97 Yes 24 0.7 Yes -22 0.58 No 47 38.96 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 68473350 + NM_133509 RAD51B 0 . . . 3.14 78.44 20 4.3 No 29 0.22 No 0 0 No -19 0.83 Yes 33 73.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131952552 + NM_005732 RAD50 0 . . . 5.99 81.25 37 5.66 Yes 40 0.74 No 0 0 No -16 0.4 No 48 63.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37070849 + NM_000249 MLH1 0 . . . 7.34 72.73 40 6.62 Yes 59 -1.61 No 0 0 No -29 0.69 Yes 46 66.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68574985 + NM_133509 RAD51B 0 . . . 6.14 72.74 19 4.91 No 29 -2.44 No 0 0 No -22 0.58 No 41 79.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68926708 + NM_133509 RAD51B 0 . . . 2.56 87.43 29 4.45 No 73 -5.72 No 0 0 No -29 0.72 Yes 48 45.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89711031 + NM_000314 PTEN 0 . . . 0.11 74.49 12 3.77 No 36 1.01 Yes 0 0 No -23 0.48 No 31 69.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37080345 + NM_000249 MLH1 0 . . . 6.94 0 27 6.92 Yes 24 1.06 Yes 0 0 No -30 0.68 Yes 46 45.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68634189 + NM_133509 RAD51B 0 . . . 1.87 71.33 35 6.29 Yes 0 -1.78 No 0 0 No -28 0.56 No 24 77.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68616336 + NM_133509 RAD51B 0 . . . 4.32 77.1 15 5 No 49 0.05 No 0 0 No -21 0.49 No 37 61.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108157011 + NM_000051 ATM 0 . . . 2.79 77.77 21 5.75 Yes 54 -4.95 No 0 0 No -35 0.72 Yes 48 43.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94216659 - NM_005591 MRE11 0 . . . 4.14 73.73 35 6.9 Yes 59 -2.46 No 0 0 No -34 0.9 Yes 44 39.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59884150 - NM_032043 BRIP1 0 . . . 0.13 79.76 24 2.79 No 62 -5.15 No 0 0 No -20 0.48 No 49 25.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152352711 - NM_005431 XRCC2 0 . . . 4.6 72.71 21 4.8 No 62 1.49 Yes 0 0 No -23 0.45 No 45 67.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68773917 + NM_133509 RAD51B 0 . . . 4.86 75.39 12 5.34 No 5 0.36 No 0 0 No -25 0.51 No 53 81.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52441255 - NM_004656 BAP1 0 . . . 3.01 82.91 38 6.53 Yes 43 -1.66 No 0 0 No -33 0.75 Yes 44 55.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68493484 + NM_133509 RAD51B 0 . . . 2.27 81.98 21 4.8 No 19 -2.56 No 0 0 No -20 0.91 Yes 44 71.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89706132 + NM_000314 PTEN 0 . . . 2.51 71.46 15 4.17 No 58 -3.65 No 0 0 No -24 0.76 Yes 52 61.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108092911 + NM_000051 ATM 0 . . . 5.52 80.01 15 4.47 No 42 -0.94 No 0 0 No -39 0.6 No 46 33.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21995913 - NM_000077 CDKN2A 0 . . . 2.3 77.26 25 5.38 No 63 -3.06 No 0 0 No -24 0.89 Yes 52 51.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68944126 + NM_133509 RAD51B 0 . . . 4.17 0 19 5 No 9 1.25 Yes 0 0 No -30 0.47 No 49 52.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7580221 - NM_000546 TP53 0 . . . 0.25 66.8 17 5.29 No 60 0.23 No 0 0 No -24 0.55 No 62 23.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68552029 + NM_133509 RAD51B 0 . . . 4.63 85.43 10 5 No 75 0.09 No 0 0 No -21 0.31 No 50 51.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47633988 + NM_000251 MSH2 0 . . . 3.02 69.78 29 6.91 Yes 68 -5.58 No 0 0 No -28 0.45 No 44 57.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59794351 - NM_032043 BRIP1 0 . . . 0.99 62.53 31 5.55 No 40 0.02 No 0 0 No -30 0.44 No 44 68.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94160995 - NM_005591 MRE11 0 . . . 4.75 68.89 35 6.24 Yes 2 1.04 Yes 0 0 No -35 0.42 No 47 56.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89629747 + NM_000314 PTEN 0 . . . 1.13 76.2 15 6.14 Yes 11 0.61 No 0 0 No -30 0.39 No 47 73.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59934183 - NM_032043 BRIP1 0 . . . 4.96 75.66 29 5.92 Yes 35 0.97 Yes 0 0 No -29 0.52 No 34 85.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68653354 + NM_133509 RAD51B 0 . . . 3.38 74.96 29 5.29 No -4 0.65 No 0 0 No -28 0.62 No 52 55.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47737961 + NM_000251 MSH2 0 . . . 6.33 95.43 25 5.1 No 0 0.1 No 0 0 No -45 0.59 No 44 40 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104171972 - NM_001100119 XRCC3 0 . . . 0.68 75.74 36 7.37 Yes 56 1.22 Yes 0 0 No -29 0.36 No 41 28.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69012600 + NM_133509 RAD51B 0 . . . 8.39 87.89 17 7.21 Yes 3 1.22 Yes 0 0 No -15 0.43 No 40 62.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68868267 + NM_133509 RAD51B 0 . . . 6.01 84.05 43 6.92 Yes 61 2.21 Yes 0 0 No -25 0.82 Yes 50 68.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21978983 - NM_000077 CDKN2A 0 . . . 5.94 78.99 21 5.56 Yes 37 1.27 Yes 0 0 No -21 0.58 No 42 75.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48032365 + NM_000179 MSH6 0 . . . 5.44 75.98 23 4.69 No 70 -1.79 No 0 0 No -22 0.76 Yes 13 91.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68950301 + NM_133509 RAD51B 0 . . . 2 67.92 27 3.72 No 18 0.69 No 0 0 No -19 0.57 No 40 84.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94201451 - NM_005591 MRE11 0 . . . 3.87 70.82 20 4.36 No 70 0.65 No 0 0 No -50 0.38 No 42 91.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89636467 + NM_000314 PTEN 0 . . . 1.67 78.45 28 5.85 Yes 63 0.39 No 0 0 No -27 0.93 Yes 39 86.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90955303 - NM_002485 NBN 0 . . . 1.81 75.68 37 7.69 Yes 3 1.27 Yes 0 0 No -36 0.33 No 38 84.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68779641 + NM_004360 CDH1 0 . . . 2.4 66.39 25 5.57 Yes 71 0.51 No 0 0 No -22 0.57 No 53 59.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68348439 + NM_133509 RAD51B 0 . . . 4.13 88.52 17 6.16 Yes 44 1.03 Yes 0 0 No -49 0.46 No 52 54.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89637808 + NM_000314 PTEN 0 . . . 8.42 83.29 25 4.69 No 69 0.04 No 0 0 No -20 0.66 No 32 51.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68874498 + NM_133509 RAD51B 0 . . . 0.47 64.46 16 5.9 Yes 51 -5.21 No 0 0 No -28 0.91 Yes 56 25.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90997985 - NM_002485 NBN 0 . . . 0.89 66.01 15 4.98 No 23 1.89 Yes 0 0 No -24 0.66 No 35 88.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23641606 - NM_024675 PALB2 0 . . . 1.21 70.53 18 4.22 No 63 0.46 No 0 0 No -26 0.85 Yes 47 85.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108098397 + NM_000051 ATM 0 . . . 5.65 65.74 27 5.67 Yes 58 1.12 Yes 0 0 No -26 0.8 Yes 39 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68831324 + NM_133509 RAD51B 0 . . . 7.38 89.13 17 4.8 No 8 0.78 Yes 0 0 No -21 0.66 No 50 79.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68867304 + NM_133509 RAD51B 0 . . . 0.44 66.19 22 6.24 Yes 6 0.57 No 0 0 No -21 0.96 Yes 15 73.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105175300 + NM_021930 RINT1 0 . . . 1.64 67.12 20 4.86 No 26 0.37 No 0 0 No -26 0.47 No 32 75.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69123306 + NM_133509 RAD51B 0 . . . 2.74 73.2 20 4.69 No 22 -2.26 No 0 0 No -19 0.95 Yes 49 50.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90949868 - NM_002485 NBN 0 . . . 0.54 66.47 26 6.07 Yes 17 -1.79 No 0 0 No -35 0.59 No 41 69.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40988436 + NM_001164269 RAD51 0 . . . 1.17 68.7 12 5.33 No 66 0.92 Yes 0 0 No -21 0.61 No 46 36.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41266732 - NM_007294 BRCA1 0 . . . 0.17 61.77 35 6.13 Yes 60 0.96 Yes 0 0 No -34 0.51 No 49 36.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68568845 + NM_133509 RAD51B 0 . . . 1.6 70.4 24 5 No 58 0.73 No 0 0 No -23 0.95 Yes 48 35.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32896964 + NM_000059 BRCA2 0 . . . 7.63 82.8 63 6.33 Yes 45 0.66 No 0 0 No -33 0.46 No 42 66.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105180078 + NM_021930 RINT1 0 . . . 2.88 71.63 27 4.83 No 40 0.66 No 0 0 No -19 0.59 No 46 33.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108203681 + NM_000051 ATM 0 . . . 8.02 81.64 13 4.12 No 48 0.15 No 0 0 No -26 0.36 No 43 80.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69065424 + NM_133509 RAD51B 0 . . . 2.5 75.21 22 5.29 No 60 -4.17 No 0 0 No -21 0.63 No 31 34.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68670527 + NM_133509 RAD51B 0 . . . 7.35 88.66 24 4.8 No 10 0.58 No 0 0 No -21 0.65 No 48 89.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59851567 - NM_032043 BRIP1 0 . . . 4.03 90.18 13 6.55 Yes 49 1.01 Yes 0 0 No -29 0.6 No 37 70.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68990743 + NM_133509 RAD51B 0 . . . 2.07 63.57 26 4.61 No 37 0.59 No 0 0 No -33 0.57 No 44 88.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59823554 - NM_032043 BRIP1 0 . . . 5.12 74.69 43 5.62 Yes 40 1.19 Yes 0 0 No -42 0.51 No 44 70.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32927326 + NM_000059 BRCA2 0 . . . 3.63 68.99 17 4.47 No 42 1.08 Yes 0 0 No -32 0.5 No 38 87.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68758654 + NM_133509 RAD51B 0 . . . 2.86 87.01 17 4.68 No 46 0.56 No 0 0 No -30 0.46 No 49 82.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68705122 + NM_133509 RAD51B 0 . . . 0.94 67.99 30 5.39 No 26 -2.49 No 0 0 No -29 0.48 No 39 88.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108162394 + NM_000051 ATM 0 . . . 2.22 0 18 6.96 Yes 16 0.71 No 0 0 No -30 0.5 No 38 70.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68677879 + NM_133509 RAD51B 0 . . . 0.85 0 14 5.07 No 70 0.93 Yes 0 0 No -57 0.29 No 50 62.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131933529 + NM_005732 RAD50 0 . . . 0.09 75.18 29 5.28 No 68 0.39 No 0 0 No -26 0.7 Yes 48 21.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47636687 + NM_000251 MSH2 0 . . . 2.24 80.12 21 6.08 Yes 7 1.16 Yes 0 0 No -20 0.84 Yes 39 63.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69084768 + NM_133509 RAD51B 0 . . . 1.48 61.57 29 5.92 Yes 72 -6.03 No 0 0 No -28 0.68 Yes 47 62.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68476106 + NM_133509 RAD51B 0 . . . 2.67 66.42 23 4.9 No 36 0.76 No 0 0 No -23 0.51 No 40 64.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68763054 + NM_133509 RAD51B 0 . . . 8.47 93.42 22 4.21 No 7 0.4 No 0 0 No -21 0.68 Yes 51 83.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68784885 + NM_004360 CDH1 0 . . . 1.58 85.32 37 7.48 Yes 32 0.38 No 0 0 No -27 0.57 No 26 52.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68378640 + NM_133509 RAD51B 0 . . . 1.58 0 33 5.43 No 9 0.36 No 0 0 No -32 0.25 No 46 89.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68377094 + NM_133509 RAD51B 0 . . . 0.94 76.63 32 5.57 Yes 58 -3.88 No 0 0 No -27 0.63 No 43 60.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68781212 + NM_004360 CDH1 0 . . . 6.49 79.32 23 4.22 No 28 -1.07 No 0 0 No -28 0.43 No 48 86.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41014219 + NM_001164269 RAD51 0 . . . 0.9 0 21 4.83 No 42 0.21 No 0 0 No -21 0.5 No 48 60.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56784477 + NM_058216 RAD51C 0 . . . 2.98 75.44 29 5.38 No 30 -1.72 No 0 0 No -28 0.27 No 48 55.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41017007 + NM_001164269 RAD51 0 . . . 1.28 62.62 24 4.87 No 44 1.31 Yes 0 0 No -23 0.89 Yes 38 89.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41238521 - NM_007294 BRCA1 0 . . . 3.21 62.13 24 4.84 No 44 0.9 Yes 0 0 No -23 0.74 Yes 47 53.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59887257 - NM_032043 BRIP1 0 . . . 0.09 0 23 4.69 No 8 0.46 No 0 0 No -47 0.51 No 50 82.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68692527 + NM_133509 RAD51B 0 . . . 1.93 74.34 20 4.54 No 13 1.42 Yes 0 0 No -19 0.62 No 45 91.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68697166 + NM_133509 RAD51B 0 . . . 0.66 0 39 4.8 No 29 0.66 No 0 0 No -27 0.72 Yes 46 38.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105186596 + NM_021930 RINT1 0 . . . 1.85 79.91 27 6.69 Yes 35 -2 No 0 0 No -26 0.85 Yes 40 58.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108172913 + NM_000051 ATM 0 . . . 3.3 66.82 48 6.17 Yes 48 0.37 No 0 0 No -36 0.58 No 41 87.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48028322 + NM_000179 MSH6 0 . . . 0.73 0 23 6.12 Yes 5 0.12 No 0 0 No -22 0.62 No 53 65.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32963895 + NM_000059 BRCA2 0 . . . 1.17 80.82 27 3.79 No 63 0.8 Yes 0 0 No -25 0.33 No 25 71.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52434478 - NM_004656 BAP1 0 . . . 2.67 77.69 18 4.8 No -2 0.02 No 0 0 No -29 0.45 No 53 42.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69047766 + NM_133509 RAD51B 0 . . . 2.88 68.67 36 5.98 Yes 73 0.69 No 0 0 No -23 0.29 No 42 58.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68748587 + NM_133509 RAD51B 0 . . . 5.9 75.98 26 5.1 No 45 1.77 Yes 0 0 No -25 0.76 Yes 51 79.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40999029 + NM_001164269 RAD51 0 . . . 1.13 66.91 15 5.47 No 38 1.14 Yes 0 0 No -26 0.88 Yes 41 65.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68523777 + NM_133509 RAD51B 0 . . . 3.2 80.22 22 4.84 No 67 -4.96 No 0 0 No -21 0.86 Yes 48 84.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68351751 + NM_133509 RAD51B 0 . . . 0.73 0 27 5.72 Yes 74 0.61 No 0 0 No -26 0.87 Yes 51 46.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215592415 - NM_000465 BARD1 0 . . . 5.25 80.42 25 5.1 No 34 -4.36 No 0 0 No -24 0.56 No 51 76.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32963681 + NM_000059 BRCA2 0 . . . 2.27 0 30 5.57 Yes 35 0.94 Yes 0 0 No -30 0.68 Yes 28 77.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89651768 + NM_000314 PTEN 0 . . . 1 63.24 20 3.56 No 41 -4.65 No 0 0 No -19 0.8 Yes 45 46.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68684440 + NM_133509 RAD51B 0 . . . 2.28 73.82 28 5.82 Yes -2 1.13 Yes 0 0 No -20 0.78 Yes 49 61.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68358513 + NM_133509 RAD51B 0 . . . 3.52 63.57 34 5.55 No 53 -2.81 No 0 0 No -23 0.76 Yes 54 25.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47779452 + NM_000251 MSH2 0 . . . 1.21 72.47 15 5.19 No 4 -0.23 No 0 0 No -23 0.61 No 57 34.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68736444 + NM_133509 RAD51B 0 . . . 4.51 83.61 29 5.39 No 55 1.25 Yes 0 0 No -22 0.71 Yes 45 95.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215632553 - NM_000465 BARD1 0 . . . 0.7 69.72 31 4.81 No 51 0.21 No 0 0 No -25 0.41 No 50 31.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23627027 - NM_024675 PALB2 0 . . . 1.32 0 30 6.22 Yes 72 -5.28 No 0 0 No -26 0.71 Yes 43 45.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131978347 + NM_005732 RAD50 0 . . . 10.75 79.62 36 5.77 Yes 68 0.37 No 0 0 No -30 0.5 No 49 66.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215640869 - NM_000465 BARD1 0 . . . 1.4 65.66 32 5.74 Yes 44 -4.04 No 0 0 No -26 0.67 Yes 58 54.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90976059 - NM_002485 NBN 0 . . . 0.38 68.9 20 4.27 No 2 0.62 No 0 0 No -19 0.81 Yes 46 69.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41010771 + NM_001164269 RAD51 0 . . . 1.37 70.84 12 4.24 No 58 -1.76 No 0 0 No -37 0.56 No 45 48.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59894200 - NM_032043 BRIP1 0 . . . 3.85 74.18 15 5.15 No 25 0.69 No 0 0 No -15 0.38 No 33 67.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108137707 + NM_000051 ATM 0 . . . 4.81 74.19 28 8.04 Yes 7 0.98 Yes 0 0 No -27 0.79 Yes 51 79.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68831575 + NM_133509 RAD51B 0 . . . 0.35 0 16 3.83 No 18 0.52 No 0 0 No -15 0.71 Yes 40 72.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47697359 + NM_000251 MSH2 0 . . . 3.13 78.08 76 6.4 Yes 32 1.49 Yes 0 0 No -26 0.47 No 42 50.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68962454 + NM_133509 RAD51B 0 . . . 9.51 85.29 29 4.59 No 45 0.3 No 0 0 No -21 0.72 Yes 42 67.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47701388 + NM_000251 MSH2 0 . . . 3.9 76.55 47 8.1 Yes 44 1.76 Yes 0 0 No -46 0.4 No 14 28.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47772959 + NM_000251 MSH2 0 . . . 1.01 65.56 21 4.9 No 0 1.01 Yes 0 0 No -17 0.78 Yes 43 26.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32967792 + NM_000059 BRCA2 0 . . . 4.74 86.46 17 6.53 Yes 20 0.47 No 0 0 No -26 0.74 Yes 38 82.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68885039 + NM_133509 RAD51B 0 . . . 4.66 83.95 18 4.38 No 3 0.86 Yes 0 0 No -25 0.33 No 42 84.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68696613 + NM_133509 RAD51B 0 . . . 4.66 77.94 26 5.27 No 17 0.46 No 0 0 No -25 0.61 No 41 91.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68970908 + NM_133509 RAD51B 0 . . . 3.21 82.19 19 4.79 No -3 0.71 No 0 0 No -26 0.82 Yes 47 71.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32971683 + NM_000059 BRCA2 0 . . . 3.22 67.88 16 5.8 Yes 76 1.42 Yes 0 0 No -28 0.71 Yes 35 52.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105194598 + NM_021930 RINT1 0 . . . 0.01 77.34 15 4.12 No 11 1.66 Yes 0 0 No -32 0.55 No 39 59.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190667908 + NM_000534 PMS1 0 . . . 1.34 57.67 17 5.29 No 16 0.8 Yes 0 0 No -16 0.49 No 42 46.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68938169 + NM_133509 RAD51B 0 . . . 0.16 76.94 39 6.36 Yes 63 -6.29 No 0 0 No -38 0.8 Yes 48 48.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190739293 + NM_000534 PMS1 0 . . . 0.2 0 59 8 Yes 58 -3.36 No 0 0 No -49 0.64 No 26 59.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94216746 - NM_005591 MRE11 0 . . . 0.5 67.82 36 6.74 Yes 39 0.55 No 0 0 No -35 0.73 Yes 19 36.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41238390 - NM_007294 BRCA1 0 . . . 9.12 94.28 15 5.38 No 16 0.51 No 0 0 No -22 0.9 Yes 38 66.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52445214 - NM_004656 BAP1 0 . . . 2.87 78.56 16 5.18 No 34 0.52 No 0 0 No -40 0.36 No 31 41.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68312485 + NM_133509 RAD51B 0 . . . 1.06 0 16 4.55 No 20 0.17 No 0 0 No -24 0.83 Yes 43 69.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59845460 - NM_032043 BRIP1 0 . . . 3.28 77.73 21 5.2 No 2 0.17 No 0 0 No -20 0.58 No 48 43.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108233091 + NM_000051 ATM 0 . . . 0.31 52.76 20 4.15 No 70 -3.87 No 0 0 No -26 0.67 Yes 44 46.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152347870 - NM_005431 XRCC2 0 . . . 1.41 84.22 56 7.75 Yes 33 0.99 Yes 0 0 No -24 0.47 No 50 54.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1227784 + NM_000455 STK11 0 . . . 6.66 68.61 27 5.62 Yes NA NA NA 0 0 No -31 0.44 No 43 58.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68860660 + NM_133509 RAD51B 0 . . . 10.35 89.14 25 5.06 No 69 0.96 Yes 0 0 No -25 0.23 No 51 78.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68315728 + NM_133509 RAD51B 0 . . . 6.42 80.59 20 5 No 38 1.37 Yes 0 0 No -26 0.27 No 45 61.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59873519 - NM_032043 BRIP1 0 . . . 1.39 65.49 24 4.77 No 51 -2.93 No 0 0 No -56 0.67 Yes 45 26.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75512782 - NM_001040108 MLH3 0 . . . 1.08 84.22 50 8.87 Yes 33 1.05 Yes 0 0 No -49 0.43 No 25 47.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56786701 + NM_058216 RAD51C 0 . . . 3.15 68.34 14 4.47 No 21 1.71 Yes 0 0 No -45 0.83 Yes 37 60.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68371761 + NM_133509 RAD51B 0 . . . 0.87 0 46 7.78 Yes 45 0.73 No 0 0 No -29 0.58 No 38 80.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68660462 + NM_133509 RAD51B 0 . . . 0.37 70.98 18 4.79 No 17 1.16 Yes 0 0 No -49 0.82 Yes 46 65.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94165024 - NM_005591 MRE11 0 . . . 4.51 91.49 15 5.83 Yes 67 1.18 Yes 0 0 No -21 0.58 No 47 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108230859 + NM_000051 ATM 0 . . . 7.13 75.13 21 5.1 No 60 -4.78 No 0 0 No -45 0.52 No 42 43.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69010441 + NM_133509 RAD51B 0 . . . 6.78 81.08 43 7.24 Yes 74 1.21 Yes 0 0 No -42 0.34 No 49 87.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69042896 + NM_133509 RAD51B 0 . . . 4.93 82.45 42 7.31 Yes -4 2.13 Yes 0 0 No -41 0.88 Yes 49 27.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190714015 + NM_000534 PMS1 0 . . . 3.22 69.59 16 5.47 No 27 1.08 Yes 0 0 No -15 0.4 No 31 89.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190664287 + NM_000534 PMS1 0 . . . 4.95 86.04 35 6 Yes 0 -1.62 No 0 0 No -34 0.87 Yes 44 59.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75493795 - NM_001040108 MLH3 0 . . . 1.08 0 22 4.08 No 29 1.47 Yes 0 0 No -19 0.6 No 29 58.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32922437 + NM_000059 BRCA2 0 . . . 0.73 65.52 12 5.39 No 71 -5.62 No 0 0 No -26 0.41 No 47 47.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108187098 + NM_000051 ATM 0 . . . 2.94 79.59 21 6.19 Yes 21 0.59 No 0 0 No -23 0.46 No 48 61.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59830117 - NM_032043 BRIP1 0 . . . 0.45 70.09 25 3.48 No 21 1.05 Yes 0 0 No -25 0.43 No 29 52.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47727095 + NM_000251 MSH2 0 . . . 6.48 76.42 23 5.66 Yes 10 1.67 Yes 0 0 No -33 0.37 No 37 86.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68331346 + NM_133509 RAD51B 0 . . . 5.31 75.51 32 4.57 No 38 1.22 Yes 0 0 No -25 0.78 Yes 45 84.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94206194 - NM_005591 MRE11 0 . . . 3.62 70.95 30 5.97 Yes 24 2.01 Yes 0 0 No -29 0.65 No 41 94.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29113699 - NM_001005735 CHEK2 0 . . . 5.12 85.02 16 4.4 No 6 1.12 Yes 0 0 No -15 0.43 No 52 76.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68871341 + NM_133509 RAD51B 0 . . . 0.76 80.35 24 4.63 No 16 1.2 Yes 0 0 No -46 0.77 Yes 38 63.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108166774 + NM_000051 ATM 0 . . . 4 80.96 17 6 Yes 60 1.03 Yes 0 0 No -26 0.5 No 50 76.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68856947 + NM_004360 CDH1 0 . . . 6.07 80.72 35 6.4 Yes 2 0.59 No 0 0 No -34 0.3 No 48 91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68813095 + NM_004360 CDH1 0 . . . 7.62 83.85 23 5.46 No 16 0.77 Yes 0 0 No -22 0.53 No 42 75.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152345970 - NM_005431 XRCC2 0 . . . 1.03 67.87 38 5.02 No 32 0.91 Yes 0 0 No -37 0.67 Yes 26 63.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152353941 - NM_005431 XRCC2 0 . . . 4.09 0 19 5 No 56 0.45 No 0 0 No -30 0.37 No 40 67.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152343999 - NM_005431 XRCC2 0 . . . 1.82 72.54 19 4.9 No 24 0.06 No 0 0 No -44 0.5 No 48 77.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89718088 + NM_000314 PTEN 0 . . . 6.35 70.57 11 4.9 No 40 -3.27 No 0 0 No -26 0.27 No 47 49.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37068883 + NM_000249 MLH1 0 . . . 1.59 61.89 23 4.34 No 18 1.01 Yes 0 0 No -23 0.56 No 40 77.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68541649 + NM_133509 RAD51B 0 . . . 7.05 84.05 26 3.88 No 41 0.8 Yes 0 0 No -26 0.67 Yes 52 73.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59846270 - NM_032043 BRIP1 0 . . . 6.43 87.28 22 5.2 No 64 0.63 No 0 0 No -21 0.47 No 49 67.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41004005 + NM_001164269 RAD51 0 . . . 0.02 58.37 18 4.58 No 61 0.13 No 0 0 No -17 0.82 Yes 41 41.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68375182 + NM_133509 RAD51B 0 . . . 12.39 92.08 15 4.58 No 67 -4.51 No 0 0 No -22 0.45 No 42 78.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68985795 + NM_133509 RAD51B 0 . . . 5.33 76.61 29 5.43 No 37 0.67 No 0 0 No -28 0.78 Yes 46 89.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41020621 + NM_001164269 RAD51 0 . . . 1.56 76.63 18 4.92 No 53 -3.57 No 0 0 No -28 0.71 Yes 53 44.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69077465 + NM_133509 RAD51B 0 . . . 3.26 71.08 24 5.83 Yes 5 -1.37 No 0 0 No -23 0.57 No 45 42.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68987895 + NM_133509 RAD51B 0 . . . 5.25 75.97 22 5.29 No 75 0.54 No 0 0 No -21 0.69 Yes 35 80.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131917161 + NM_005732 RAD50 0 . . . 4.05 69.08 27 5.42 No 20 1.04 Yes 0 0 No -27 0.67 Yes 32 73.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68901197 + NM_133509 RAD51B 0 . . . 7.5 83.78 15 5.82 Yes 69 0.62 No 0 0 No -32 0.4 No 49 77.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108192658 + NM_000051 ATM 0 . . . 1.93 76.28 14 4.36 No 53 0.08 No 0 0 No -42 0.82 Yes 40 53.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68559821 + NM_133509 RAD51B 0 . . . 3.02 76.63 18 5.83 Yes 14 0.77 No 0 0 No -27 0.75 Yes 44 50.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68343098 + NM_133509 RAD51B 0 . . . 3.28 78.15 44 7.63 Yes 20 1.36 Yes 0 0 No -25 0.4 No 38 96.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108237405 + NM_000051 ATM 0 . . . 0.56 73.24 36 6.16 Yes 20 0.37 No 0 0 No -35 0.61 No 32 81.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21988659 - NM_000077 CDKN2A 0 . . . 0.93 65.88 15 4.09 No 6 1.05 Yes 0 0 No -28 0.38 No 48 43.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108103451 + NM_000051 ATM 0 . . . 2.24 80.12 30 6.64 Yes 7 0.57 No 0 0 No -29 0.56 No 51 76.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108168876 + NM_000051 ATM 0 . . . 1.3 66.81 16 5.47 No 54 0.21 No 0 0 No -24 0.57 No 44 30.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33426954 - NM_002878 RAD51D 0 . . . 8.81 86.71 20 4.68 No 7 0.76 No 0 0 No -28 0.45 No 51 62.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21978379 - NM_000077 CDKN2A 0 . . . 4.73 89.17 21 5.02 No 13 0.24 No 0 0 No -26 0.46 No 37 50.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190681735 + NM_000534 PMS1 0 . . . 1.44 59.92 16 5.08 No 75 1.58 Yes 0 0 No -25 0.35 No 10 48.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68756183 + NM_133509 RAD51B 0 . . . 0.32 74.68 14 4.9 No 60 0.66 No 0 0 No -20 0.59 No 54 79.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68780182 + NM_004360 CDH1 0 . . . 1.23 67.08 41 6.56 Yes 22 0.64 No 0 0 No -29 0.82 Yes 36 33.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89704015 + NM_000314 PTEN 0 . . . 0.91 70.6 10 4 No 9 0.02 No 0 0 No -20 0.67 Yes 49 38.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89649124 + NM_000314 PTEN 0 . . . 4.26 0 9 5.1 No 3 1.16 Yes 0 0 No -43 0.34 No 49 51.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59759746 - NM_032043 BRIP1 0 . . . 6.83 76.11 29 4.58 No -3 0.99 Yes 0 0 No -25 0.44 No 41 68.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68977074 + NM_133509 RAD51B 0 . . . 7.6 90.38 19 5.57 Yes 7 0.96 Yes 0 0 No -18 0.49 No 51 77.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48024092 + NM_000179 MSH6 0 . . . 0.55 0 30 5.99 Yes 72 -5.89 No 0 0 No -29 0.91 Yes 51 55.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41260191 - NM_007294 BRCA1 0 . . . 0.69 73.91 23 5 No 60 1.38 Yes 0 0 No -22 0.89 Yes 45 58.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69129638 + NM_133509 RAD51B 0 . . . 8.53 84.29 28 5.64 Yes 62 0.17 No 0 0 No -28 0.29 No 41 66.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68749427 + NM_133509 RAD51B 0 . . . 6.44 69.36 28 6.31 Yes 8 1.57 Yes 0 0 No -27 0.93 Yes 50 84.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108136776 + NM_000051 ATM 0 . . . 0.31 52.76 10 4.79 No 70 -3.86 No 0 0 No -32 0.39 No 44 47.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68617650 + NM_133509 RAD51B 0 . . . 1.86 0 20 5.06 No 1 1.05 Yes 0 0 No -20 0.3 No 51 51.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68809176 + NM_133509 RAD51B 0 . . . 3.49 80.67 20 6.99 Yes 65 0.8 Yes 0 0 No -19 0.61 No 51 29.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37040971 + NM_000249 MLH1 0 . . . 3 0 18 4.79 No 45 -3.16 No 0 0 No -42 0.48 No 54 48.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48034892 + NM_000179 MSH6 0 . . . 3.94 75.33 39 5.22 No 35 0.99 Yes 0 0 No -38 0.65 No 41 51.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7587992 - NM_000546 TP53 0 . . . 9.58 96.18 42 6.84 Yes 40 0.32 No 0 0 No -42 0.33 No 42 83.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32927438 + NM_000059 BRCA2 0 . . . 1.36 76.66 32 5.74 Yes 20 0.62 No 0 0 No -31 0.56 No 14 94.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190652235 + NM_000534 PMS1 0 . . . 5.86 89.85 18 5.12 No 3 0.42 No 0 0 No -20 0.22 No 43 45.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47736241 + NM_000251 MSH2 0 . . . 0.33 59.79 14 4.21 No 10 -2.73 No 0 0 No -22 0.51 No 43 63.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68939843 + NM_133509 RAD51B 0 . . . 0.28 64.49 27 6.09 Yes 23 1.11 Yes 0 0 No -26 0.73 Yes 39 67.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47806154 + NM_000251 MSH2 0 . . . 2.43 75.34 33 5.8 Yes 9 -2.32 No 0 0 No -32 0.42 No 49 59.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642108 - NM_000465 BARD1 0 . . . 9.71 88.71 16 5.06 No 5 0.59 No 0 0 No -20 0.8 Yes 49 57.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69139603 + NM_133509 RAD51B 0 . . . 3.77 65.96 31 5.91 Yes 30 0.83 Yes 0 0 No -30 0.76 Yes 21 67.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41204210 - NM_007294 BRCA1 0 . . . 1.98 67.52 25 5.25 No 4 1.02 Yes 0 0 No -24 0.84 Yes 54 44.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215615417 - NM_000465 BARD1 0 . . . 6.92 85.38 13 4.24 No 26 1.16 Yes 0 0 No -20 0.77 Yes 46 64.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69003374 + NM_133509 RAD51B 0 . . . 0.63 78.87 53 6.29 Yes 0 0.43 No 0 0 No -25 0.57 No 46 62.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645342 - NM_024675 PALB2 0 . . . 1.84 57.78 38 6.54 Yes 29 0.82 Yes 0 0 No -24 0.51 No 47 55.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68854922 + NM_004360 CDH1 0 . . . 2.93 73.44 26 4.24 No 48 0.89 Yes 0 0 No -31 0.65 No 40 59.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68826507 + NM_133509 RAD51B 0 . . . 4.87 90.04 16 4.69 No 57 0.84 Yes 0 0 No -58 0.48 No 43 80.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68930063 + NM_133509 RAD51B 0 . . . 6.39 74.06 21 6.78 Yes 9 1.09 Yes 0 0 No -20 0.88 Yes 49 87.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68975612 + NM_133509 RAD51B 0 . . . 4.58 80.17 20 5.07 No 22 -0.18 No 0 0 No -23 0.75 Yes 52 66.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89726652 + NM_000314 PTEN 0 . . . 0.21 74.93 20 6.33 Yes 3 0.51 No 0 0 No -19 0.38 No 42 87.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1209729 + NM_000455 STK11 0 . . . 9.87 80.58 20 5.57 Yes 22 1.2 Yes 0 0 No -19 0.63 No 48 73.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75482004 - NM_001040108 MLH3 0 . . . 4.84 70.76 27 6.25 Yes 6 1.63 Yes 0 0 No -26 0.8 Yes 40 52.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90983401 - NM_002485 NBN 0 . . . 6.12 72.14 37 7.67 Yes 68 -3.3 No 0 0 No -37 0.63 No 45 53.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41244746 - NM_007294 BRCA1 0 . . . 3.82 74.21 21 4.74 No 62 -3.91 No 0 0 No -21 0.68 Yes 43 82.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68594641 + NM_133509 RAD51B 0 . . . 2.85 76.92 22 5.29 No 42 0.34 No 0 0 No -21 0.8 Yes 13 60.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68835664 + NM_133509 RAD51B 0 . . . 1.07 0 21 4.68 No 15 0.87 Yes 0 0 No -20 0.9 Yes 43 65.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68813596 + NM_133509 RAD51B 0 . . . 6.41 83.23 26 6.24 Yes 68 0.95 Yes 0 0 No -25 0.63 No 49 91.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37056732 + NM_000249 MLH1 0 . . . 8.7 92.61 13 4.27 No 9 1.04 Yes 0 0 No -26 0.66 No 49 57.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215654886 - NM_000465 BARD1 0 . . . 2.6 67.58 25 5.24 No 30 0.97 Yes 0 0 No -30 0.45 No 43 50.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68363367 + NM_133509 RAD51B 0 . . . 1.71 64.96 17 4.66 No 22 1.2 Yes 0 0 No -23 0.54 No 43 79.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68786341 + NM_133509 RAD51B 0 . . . 1.49 0 15 5.1 No 61 0.92 Yes 0 0 No -20 0.61 No 53 88.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59903374 - NM_032043 BRIP1 0 . . . 5.55 78.03 70 6.87 Yes 72 1.58 Yes 0 0 No -36 0.76 Yes 49 52.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68430682 + NM_133509 RAD51B 0 . . . 6.62 81.36 21 6.84 Yes 2 1.66 Yes 0 0 No -20 0.7 Yes 47 57.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56810973 + NM_058216 RAD51C 0 . . . 4.87 68.61 27 5.63 Yes 43 0.87 Yes 0 0 No -29 0.49 No 37 69.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68661857 + NM_133509 RAD51B 0 . . . 4.02 69.2 44 6.83 Yes 75 -4.09 No 0 0 No -25 0.87 Yes 52 39.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68404144 + NM_133509 RAD51B 0 . . . 1.02 64.5 20 5.1 No 24 -3.26 No 0 0 No -19 0.81 Yes 42 37.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131967540 + NM_005732 RAD50 0 . . . 0.68 80.49 24 4.59 No 57 0.93 Yes 0 0 No -24 0.35 No 44 44.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131913625 + NM_005732 RAD50 0 . . . 1.08 84.22 21 5.54 No 33 0.98 Yes 0 0 No -25 0.92 Yes 51 57.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41257021 - NM_007294 BRCA1 0 . . . 4.65 0 44 6.84 Yes 75 0.16 No 0 0 No -33 0.38 No 37 68.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68284980 + NM_133509 RAD51B 0 . . . 1.33 81.44 37 6.41 Yes 76 1.03 Yes 0 0 No -36 0.63 No 50 70.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190723183 + NM_000534 PMS1 0 . . . 4.89 78.95 24 4.99 No 4 0.78 Yes 0 0 No -21 0.38 No 42 62.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104183112 - NM_001100119 XRCC3 0 . . . 0.87 76.06 16 4.2 No 73 -2.27 No 0 0 No -15 0.41 No 48 45.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274479 - NM_007294 BRCA1 0 . . . 9.01 85.37 24 5 No 11 1.1 Yes 0 0 No -23 0.82 Yes 42 42.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68715081 + NM_133509 RAD51B 0 . . . 4.35 76.58 15 3.21 No -4 0.5 No 0 0 No -57 0.68 Yes 32 66.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108209767 + NM_000051 ATM 0 . . . 2.88 67.64 13 4.36 No 70 -3.15 No 0 0 No -36 0.55 No 40 52.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68602182 + NM_133509 RAD51B 0 . . . 0.12 72.4 15 4.58 No 56 0.07 No 0 0 No -32 0.41 No 43 87.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47752760 + NM_000251 MSH2 0 . . . 0.28 67.98 50 7.43 Yes 18 -3.02 No 0 0 No -23 0.53 No 50 41.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131942544 + NM_005732 RAD50 0 . . . 2.55 68.71 27 5.74 Yes 53 -5.11 No 0 0 No -26 0.5 No 43 29.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48021529 + NM_000179 MSH6 0 . . . 1.93 81.13 23 4.8 No 33 1.12 Yes 0 0 No -51 0.64 No 25 63.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215633072 - NM_000465 BARD1 0 . . . 6.55 67.61 45 7.09 Yes 75 -4.15 No 0 0 No -27 0.46 No 42 67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59787148 - NM_032043 BRIP1 0 . . . 4.09 82.07 42 8.45 Yes 64 -5.77 No 0 0 No -41 0.6 No 47 55.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402725 + NM_133509 RAD51B 0 . . . 4.34 78.97 22 5.93 Yes 49 0.13 No 0 0 No -21 0.86 Yes 45 36.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59927273 - NM_032043 BRIP1 0 . . . 3.5 73.11 18 5.38 No 52 -3.11 No 0 0 No -22 0.5 No 40 38.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68841947 + NM_004360 CDH1 0 . . . 3.01 75.01 39 6.12 Yes 15 0.07 No 0 0 No -31 0.45 No 47 61.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89624216 + NM_000314 PTEN 0 . . . 3.71 0 19 6 Yes -4 -0.42 No 0 0 No -57 0.48 No 40 83.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68820996 + NM_004360 CDH1 0 . . . 0.18 0 24 6.96 Yes 50 0.3 No 0 0 No -23 0.85 Yes 48 67.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108101760 + NM_000051 ATM 0 . . . 0.98 70.29 24 5.83 Yes 13 0.78 Yes 0 0 No -27 0.65 No 45 79.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89675841 + NM_000314 PTEN 0 . . . 2.16 73.58 18 5.47 No 35 1.21 Yes 0 0 No -28 0.37 No 41 78.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68343778 + NM_133509 RAD51B 0 . . . 3.23 82.26 33 4.96 No 43 -3.33 No 0 0 No -13 0.47 No 45 33.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89630936 + NM_000314 PTEN 0 . . . 7.14 76.02 19 4.8 No 60 0.96 Yes 0 0 No -25 0.39 No 45 73.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69093780 + NM_133509 RAD51B 0 . . . 5.66 73.96 17 5.57 Yes 27 1.15 Yes 0 0 No -24 0.78 Yes 50 58.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94164996 - NM_005591 MRE11 0 . . . 6.86 74.12 17 4.58 No 9 0.27 No 0 0 No -21 0.33 No 40 51.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75506074 - NM_001040108 MLH3 0 . . . 8.49 87.35 20 4.47 No 50 1.79 Yes 0 0 No -34 0.62 No 36 77.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89653109 + NM_000314 PTEN 0 . . . 3.18 72.19 33 6.16 Yes 62 1.44 Yes 0 0 No -22 0.34 No 45 63.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89645185 + NM_000314 PTEN 0 . . . 1.07 76.71 22 5.62 Yes 72 -3.47 No 0 0 No -21 0.79 Yes 49 60.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56793103 + NM_058216 RAD51C 0 . . . 4.53 80.13 17 5.93 Yes 41 1.17 Yes 0 0 No -24 0.63 No 40 84.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68807440 + NM_133509 RAD51B 0 . . . 2.46 0 34 6.95 Yes 15 1.65 Yes 0 0 No -33 0.67 Yes 43 75.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7575822 - NM_000546 TP53 0 . . . 4.39 86.2 35 5.07 No 9 0.98 Yes 0 0 No -23 0.58 No 49 94.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68842391 + NM_004360 CDH1 0 . . . 0.58 67.46 26 5.38 No 20 1.59 Yes 27 0.28 Yes -25 0.95 Yes 38 98.01 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 108160772 + NM_000051 ATM 0 . . . 1.62 87.56 22 5.29 No 14 1.78 Yes 0 0 No -21 0.73 Yes 44 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68592443 + NM_133509 RAD51B 0 . . . 3.7 77.34 33 6 Yes -3 0.66 No 0 0 No -22 0.47 No 43 76.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68848546 + NM_133509 RAD51B 0 . . . 4.42 72.78 13 4.8 No 13 0.39 No 0 0 No -19 0.54 No 41 67.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215639431 - NM_000465 BARD1 0 . . . 2.41 0 29 5.8 Yes 37 0.07 No 0 0 No -28 0.9 Yes 49 64.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68399991 + NM_133509 RAD51B 0 . . . 0.51 77.36 18 4.9 No 75 1.28 Yes 0 0 No -19 0.76 Yes 53 60.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215616914 - NM_000465 BARD1 0 . . . 2.13 90.77 20 4.9 No 56 0.69 No 0 0 No -20 0.61 No 47 85.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59903623 - NM_032043 BRIP1 0 . . . 5.41 75.78 29 4.37 No 71 0.13 No 0 0 No -28 0.53 No 47 89.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68677954 + NM_133509 RAD51B 0 . . . 0.12 0 58 8.18 Yes 17 1.81 Yes 0 0 No -26 0.58 No 41 68.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37034763 + NM_000249 MLH1 0 . . . 2.35 56.47 21 5.19 No 3 -0.6 No 0 0 No -20 0.55 No 55 27.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68836041 + NM_133509 RAD51B 0 . . . 2.73 73.05 18 5.48 No 38 -3.14 No 0 0 No -17 0.56 No 46 50.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190657278 + NM_000534 PMS1 0 . . . 6.1 83.39 67 10.9 Yes 31 0.14 No 0 0 No -33 0.37 No 44 89.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68712404 + NM_133509 RAD51B 0 . . . 2.4 70.42 20 4.23 No 13 0.66 No 0 0 No -22 0.42 No 45 74.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41275047 - NM_007294 BRCA1 0 . . . 3.75 84.95 28 4.48 No 41 1.39 Yes 0 0 No -27 0.45 No 17 95.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69149964 + NM_133509 RAD51B 0 . . . 2.81 78.14 115 11.33 Yes 7 0.13 No 0 0 No -26 0.36 No 51 43.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48013544 + NM_000179 MSH6 0 . . . 1.69 74.02 16 3.57 No 62 0.95 Yes 0 0 No -24 0.67 Yes 49 65.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68481186 + NM_133509 RAD51B 0 . . . 4.21 72.8 17 6.11 Yes 56 1.18 Yes 0 0 No -34 0.44 No 35 63.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68788871 + NM_133509 RAD51B 0 . . . 0.49 65.9 21 4.89 No 65 0.8 Yes 0 0 No -20 0.35 No 38 22.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108224223 + NM_000051 ATM 0 . . . 3.43 72.51 27 6.04 Yes 36 0.52 No 0 0 No -26 0.66 No 44 41.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90975688 - NM_002485 NBN 0 . . . 4.68 73.02 34 5.14 No 9 1.79 Yes 0 0 No -33 0.45 No 49 50.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68896453 + NM_133509 RAD51B 0 . . . 4.96 91.21 37 6.56 Yes 12 1.32 Yes 0 0 No -36 0.66 No 46 93.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68936698 + NM_133509 RAD51B 0 . . . 3.45 73.37 30 5.36 No 3 1.66 Yes 0 0 No -29 0.74 Yes 38 81.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7568405 - NM_000546 TP53 0 . . . 0.22 72.75 15 4.2 No 67 0.67 No 0 0 No -27 0.83 Yes 48 74.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47720468 + NM_000251 MSH2 0 . . . 11.8 89.1 33 6.24 Yes 60 1.95 Yes 0 0 No -32 0.55 No 34 93.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131962291 + NM_005732 RAD50 0 . . . 6.35 79.62 20 6.1 Yes 41 0.52 No 0 0 No -19 0.89 Yes 42 64.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190677475 + NM_000534 PMS1 0 . . . 0.66 63.02 21 4.47 No -4 0.64 No 0 0 No -20 0.85 Yes 43 72.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59889069 - NM_032043 BRIP1 0 . . . 7.04 81.31 9 3.87 No 21 1.13 Yes 0 0 No -46 0.82 Yes 46 41.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29102036 - NM_001005735 CHEK2 0 . . . 1.08 0 32 5.74 Yes 13 1.13 Yes 0 0 No -31 0.79 Yes 37 63.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152354669 - NM_005431 XRCC2 0 . . . 4.51 88.24 17 5.29 No 45 0.06 No 0 0 No -24 0.24 No 51 83.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105189914 + NM_021930 RINT1 0 . . . 1.08 84.22 23 4.46 No 33 1.19 Yes 0 0 No -22 0.85 Yes 25 45.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45803483 - NM_001048171 MUTYH 0 . . . 2.11 80 20 5.1 No 6 0.89 Yes 0 0 No -19 0.81 Yes 36 50.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90968748 - NM_002485 NBN 0 . . . 0.98 0 15 5.53 No 61 0.89 Yes 0 0 No -22 0.84 Yes 42 41.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47644131 + NM_000251 MSH2 0 . . . 2.15 66.84 25 6.24 Yes 71 0.5 No 0 0 No -24 0.59 No 51 51.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59869061 - NM_032043 BRIP1 0 . . . 2.35 78.68 27 4.56 No 60 1.27 Yes 0 0 No -26 0.57 No 28 94.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56806697 + NM_058216 RAD51C 0 . . . 3.87 86.71 19 5.91 Yes 33 0.61 No 0 0 No -22 0.28 No 50 47.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68301258 + NM_133509 RAD51B 0 . . . 7.22 79.34 37 5.96 Yes -2 1 Yes 0 0 No -36 0.46 No 42 88.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32948553 + NM_000059 BRCA2 0 . . . 7.98 82.23 13 4.49 No 38 -1.81 No 0 0 No -42 0.81 Yes 44 67.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68942470 + NM_133509 RAD51B 0 . . . 0.99 77.46 23 5.38 No 50 -4.31 No 0 0 No -44 0.74 Yes 47 52.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68890863 + NM_133509 RAD51B 0 . . . 6.36 71.83 11 4.67 No 46 1.89 Yes 0 0 No -19 0.33 No 53 65.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68821307 + NM_004360 CDH1 0 . . . 6.31 81.41 21 4.87 No 69 1.07 Yes 0 0 No -23 0.51 No 39 50.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108222492 + NM_000051 ATM 0 . . . 1.37 0 30 4.73 No 27 -2.61 No 0 0 No -25 0.47 No 31 59.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59804882 - NM_032043 BRIP1 0 . . . 5.63 71.62 26 7.98 Yes 31 1.19 Yes 0 0 No -25 0.71 Yes 45 74.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68924633 + NM_133509 RAD51B 0 . . . 0.29 0 30 6.41 Yes 61 1.48 Yes 0 0 No -29 0.68 Yes 49 34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68789877 + NM_004360 CDH1 0 . . . 0.42 74.73 12 4.69 No 60 -1.2 No 0 0 No -29 0.27 No 24 55.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89664929 + NM_000314 PTEN 0 . . . 1.71 79.78 34 6.32 Yes 75 1.13 Yes 0 0 No -33 0.75 Yes 49 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45793933 - NM_001048171 MUTYH 0 . . . 3.73 71.22 26 5.29 No 53 0.17 No 0 0 No -25 0.63 No 48 93.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68784797 + NM_004360 CDH1 0 . . . 2.82 78.72 14 3.24 No 13 1.01 Yes 0 0 No -21 0.77 Yes 45 96.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215645399 - NM_000465 BARD1 0 . . . 1.06 74.12 33 5.51 No 43 0.59 No 0 0 No -32 0.7 Yes 43 60.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190692419 + NM_000534 PMS1 0 . . . 8.71 85.56 25 4.9 No 6 0.82 Yes 0 0 No -24 0.94 Yes 46 60.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68500940 + NM_133509 RAD51B 0 . . . 2.13 81.42 17 4.8 No 40 1.7 Yes 0 0 No -52 0.35 No 50 73.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215663941 - NM_000465 BARD1 0 . . . 2.82 68.36 16 5.19 No 16 1.27 Yes 0 0 No -24 0.32 No 42 83.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32968646 + NM_000059 BRCA2 0 . . . 2.73 69.17 30 5.93 Yes 24 0.21 No 0 0 No -29 0.78 Yes 49 58.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042898 - NM_000535 PMS2 0 . . . 5.53 92.92 30 6 Yes 56 -2.31 No 0 0 No -23 0.43 No 46 39.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32890193 + NM_000059 BRCA2 0 . . . 3.12 74.78 24 6.49 Yes 55 0.79 Yes 0 0 No -29 0.79 Yes 45 53.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190673449 + NM_000534 PMS1 0 . . . 2.8 69.14 21 5.08 No 66 -2.27 No 0 0 No -26 0.48 No 39 47.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37040200 + NM_000249 MLH1 0 . . . 3.3 83.68 12 3.85 No 70 -3.51 No 0 0 No -33 0.54 No 52 36.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47683627 + NM_000251 MSH2 0 . . . 4.76 80.06 25 4.91 No 36 1.06 Yes 0 0 No -25 0.31 No 42 56.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41241611 - NM_007294 BRCA1 0 . . . 4.42 84 14 3.8 No 10 0.2 No 0 0 No -22 0.83 Yes 48 79.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68590405 + NM_133509 RAD51B 0 . . . 1.13 63.6 20 5.4 No 47 0.64 No 0 0 No -33 0.6 No 42 45.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68390118 + NM_133509 RAD51B 0 . . . 5.03 72.65 26 5.48 No 60 0.75 No 0 0 No -25 0.65 No 42 90.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69046595 + NM_133509 RAD51B 0 . . . 0.54 70.75 17 5.29 No 22 0.32 No 0 0 No -16 0.52 No 36 74.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68826034 + NM_004360 CDH1 0 . . . 0.11 74.73 17 5.57 Yes 65 0.06 No 0 0 No -16 0.58 No 20 59.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69089004 + NM_133509 RAD51B 0 . . . 2.21 82.98 22 4.69 No -4 1.01 Yes 0 0 No -21 0.76 Yes 46 30.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105207405 + NM_021930 RINT1 0 . . . 2.2 69.31 28 8.65 Yes 71 -3.3 No 0 0 No -27 0.9 Yes 52 61.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190730915 + NM_000534 PMS1 0 . . . 4.16 73.32 24 6.71 Yes 42 1.44 Yes 0 0 No -29 0.76 Yes 16 53.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215639737 - NM_000465 BARD1 0 . . . 2.31 73.88 11 4.92 No 61 1.4 Yes 0 0 No -42 0.67 Yes 45 36.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7577562 - NM_000546 TP53 0 . . . 3.75 70.95 45 7.73 Yes 25 1.64 Yes 0 0 No -22 0.75 Yes 33 76.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190723560 + NM_000534 PMS1 0 . . . 0.73 0 30 5.39 No 22 0.79 Yes 0 0 No -29 0.51 No 36 87.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215644955 - NM_000465 BARD1 0 . . . 3.4 74.7 43 5.65 Yes 15 0.6 No 0 0 No -42 0.54 No 34 51.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108140556 + NM_000051 ATM 0 . . . 4.46 70.96 19 5 No 29 0.69 No 0 0 No -18 0.37 No 48 60.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6027440 - NM_000535 PMS2 0 . . . 2.99 73.52 22 5.86 Yes 31 1.21 Yes 0 0 No -26 0.7 Yes 40 91.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32950119 + NM_000059 BRCA2 0 . . . 5.03 81.17 17 5.56 Yes 11 0.88 Yes 0 0 No -26 0.45 No 41 58.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68783035 + NM_133509 RAD51B 0 . . . 2.27 70.07 23 5.81 Yes 64 -4.33 No 0 0 No -22 0.48 No 46 52.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47803145 + NM_000251 MSH2 0 . . . 6.34 78.04 18 4.38 No 20 0.53 No 0 0 No -21 0.56 No 34 45.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56791268 + NM_058216 RAD51C 0 . . . 0.41 83.56 18 5.28 No 45 0.24 No 0 0 No -21 0.47 No 50 91.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68577041 + NM_133509 RAD51B 0 . . . 4.68 72.89 18 5.66 Yes 64 -3.66 No 0 0 No -27 0.71 Yes 49 51.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68319064 + NM_133509 RAD51B 0 . . . 1.82 66.46 46 8.26 Yes 70 0.34 No 0 0 No -45 0.32 No 40 15.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68566791 + NM_133509 RAD51B 0 . . . 6.55 79.69 22 4.9 No 5 1.08 Yes 0 0 No -22 0.73 Yes 53 29.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59791817 - NM_032043 BRIP1 0 . . . 3.38 76.91 20 5.56 Yes 20 -2.62 No 0 0 No -19 0.83 Yes 46 75.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89621393 + NM_000314 PTEN 0 . . . 2.84 63.51 28 6.24 Yes 47 0.22 No 0 0 No -27 0.77 Yes 53 26.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108237922 + NM_000051 ATM 0 . . . 0.19 72.26 22 5.07 No 30 1.24 Yes 0 0 No -52 0.39 No 28 84.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68651738 + NM_133509 RAD51B 0 . . . 4.2 79.03 12 4.9 No 60 -5.63 No 0 0 No -23 0.56 No 44 85.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29088785 - NM_001005735 CHEK2 0 . . . 6.33 86.73 21 4.47 No 50 1.26 Yes 0 0 No -21 0.58 No 50 62.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21981458 - NM_000077 CDKN2A 0 . . . 0.58 75.23 37 6.55 Yes 34 0.21 No 0 0 No -36 0.73 Yes 24 51.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108129477 + NM_000051 ATM 0 . . . 4.34 69.32 13 4.36 No 60 1.36 Yes 0 0 No -12 0.32 No 49 36.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68673904 + NM_133509 RAD51B 0 . . . 7.96 85.79 18 4.9 No 25 0.71 No 0 0 No -33 0.79 Yes 39 91.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69023764 + NM_133509 RAD51B 0 . . . 1.15 73.71 28 4.13 No 14 0.6 No 0 0 No -27 0.56 No 49 75.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215609364 - NM_000465 BARD1 0 . . . 0.12 56.4 21 6.46 Yes 9 0.14 No 0 0 No -26 0.48 No 49 31.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215607109 - NM_000465 BARD1 0 . . . 5.36 80.28 22 4.9 No 5 1 Yes 0 0 No -21 0.78 Yes 37 58.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84389607 - NM_139076 FAM175A 0 . . . 0.76 74.29 24 4.9 No 49 0.67 No 0 0 No -23 0.52 No 54 40.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68569616 + NM_133509 RAD51B 0 . . . 0.76 0 53 9.93 Yes 0 0.23 No 0 0 No -52 0.69 Yes 58 56.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190689437 + NM_000534 PMS1 0 . . . 0.63 64.92 27 4.13 No 24 0.11 No 0 0 No -26 0.44 No 48 54.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68441273 + NM_133509 RAD51B 0 . . . 0.06 56.56 13 5.08 No 62 -6.01 No 0 0 No -39 0.78 Yes 46 31.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47802913 + NM_000251 MSH2 0 . . . 0.77 0 25 5.57 Yes 40 -3.08 No 0 0 No -24 0.66 Yes 54 38.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75487095 - NM_001040108 MLH3 0 . . . 8.04 73.38 21 4.79 No 75 1.37 Yes 0 0 No -20 0.61 No 37 75.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56776925 + NM_058216 RAD51C 0 . . . 1.37 71.04 17 4.47 No 62 -3.73 No 0 0 No -47 0.67 Yes 42 32.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90986372 - NM_002485 NBN 0 . . . 2.38 68.91 15 5.19 No 69 -5.6 No 0 0 No -55 0.53 No 39 44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47790484 + NM_000251 MSH2 0 . . . 3.48 72.18 36 6.23 Yes 56 0.59 No 0 0 No -35 0.69 Yes 40 63.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190742900 + NM_000534 PMS1 0 . . . 2.24 80.12 20 4.79 No 7 1.16 Yes 0 0 No -19 0.54 No 51 76.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90975882 - NM_002485 NBN 0 . . . 2.35 72.18 15 5.09 No 47 0.12 No 0 0 No -24 0.82 Yes 39 52.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69039369 + NM_133509 RAD51B 0 . . . 4.73 76.18 35 7.18 Yes 19 1.01 Yes 0 0 No -32 0.49 No 39 33.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68638135 + NM_133509 RAD51B 0 . . . 1.41 84.22 24 4.8 No 33 0.98 Yes 0 0 No -23 0.84 Yes 50 56.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69068972 + NM_133509 RAD51B 0 . . . 7.18 82.77 18 4.51 No 54 1.81 Yes 0 0 No -21 0.74 Yes 49 94.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190723751 + NM_000534 PMS1 0 . . . 1.92 83.01 22 5.29 No 40 1.27 Yes 0 0 No -26 0.52 No 14 70.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68862389 + NM_004360 CDH1 0 . . . 2.52 69.75 22 5.29 No 21 1.6 Yes 0 0 No -21 0.44 No 37 79.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23640405 - NM_024675 PALB2 0 . . . 1.54 71.53 25 6.18 Yes 15 -3.11 No 0 0 No -24 0.41 No 49 75.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59825787 - NM_032043 BRIP1 0 . . . 3.54 72.53 21 5 No 40 0.88 Yes 0 0 No -20 0.93 Yes 18 91.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94178832 - NM_005591 MRE11 0 . . . 3.83 82.57 21 3.9 No 56 0.11 No 0 0 No -20 0.78 Yes 46 88.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131971109 + NM_005732 RAD50 0 . . . 1.57 68.43 25 4.44 No 27 0.33 No 0 0 No -24 0.31 No 44 86.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37076442 + NM_000249 MLH1 0 . . . 1.24 0 25 7.57 Yes 42 1.19 Yes 0 0 No -28 0.64 No 57 56.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47700942 + NM_000251 MSH2 0 . . . 0.62 63.88 28 5.68 Yes 11 -2.17 No 0 0 No -31 0.63 No 44 51.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68709245 + NM_133509 RAD51B 0 . . . 0.5 70.27 20 6.15 Yes 20 1.21 Yes 0 0 No -27 0.69 Yes 38 84.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68872047 + NM_133509 RAD51B 0 . . . 3.6 74.78 25 5.29 No 56 0.24 No 0 0 No -24 0.66 No 41 61.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89704577 + NM_000314 PTEN 0 . . . 6.8 82.75 19 6.06 Yes 32 1.64 Yes 0 0 No -28 0.62 No 41 72.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69021912 + NM_133509 RAD51B 0 . . . 4.19 75.86 14 4.87 No 3 1.45 Yes 0 0 No -22 0.34 No 47 47.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68896436 + NM_133509 RAD51B 0 . . . 4.77 66.17 18 4.59 No 1 0.06 No 0 0 No -31 0.88 Yes 44 55.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108170971 + NM_000051 ATM 0 . . . 4.22 72.12 26 5.57 Yes 27 -2.45 No 0 0 No -25 0.68 Yes 45 86.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190710217 + NM_000534 PMS1 0 . . . 1.05 63.37 29 5.41 No 75 0.24 No 0 0 No -28 0.7 Yes 46 61.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108226174 + NM_000051 ATM 0 . . . 8.74 90.8 26 5.48 No 17 0.32 No 0 0 No -25 0.71 Yes 41 75.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48014705 + NM_000179 MSH6 0 . . . 0.81 0 36 5.88 Yes 50 1.03 Yes 0 0 No -25 0.62 No 62 34.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33439065 - NM_002878 RAD51D 0 . . . 1.73 68.7 26 4.18 No 38 -3.07 No 0 0 No -25 0.66 Yes 46 19.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89677474 + NM_000314 PTEN 0 . . . 2.24 66.95 27 7.39 Yes 35 1.83 Yes 0 0 No -27 0.56 No 23 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89641834 + NM_000314 PTEN 0 . . . 4.63 81.36 22 4.77 No 37 0.65 No 0 0 No -43 0.38 No 42 87.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68984922 + NM_133509 RAD51B 0 . . . 5.58 74.74 18 4.36 No 30 0.37 No 0 0 No -17 0.46 No 46 81.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68383599 + NM_133509 RAD51B 0 . . . 2.71 71.31 25 5.31 No 27 0.95 Yes 0 0 No -22 0.82 Yes 45 82.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190691379 + NM_000534 PMS1 0 . . . 4.86 82.11 26 4.93 No 9 1.04 Yes 0 0 No -25 0.73 Yes 49 80.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108204933 + NM_000051 ATM 0 . . . 8.46 86.12 25 5.48 No 60 1.2 Yes 0 0 No -24 0.65 No 31 47.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68449882 + NM_133509 RAD51B 0 . . . 3.01 73.03 17 4 No 67 1.27 Yes 0 0 No -21 0.6 No 42 45.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75497151 - NM_001040108 MLH3 0 . . . 3.2 77.52 17 5.66 Yes 38 1.95 Yes 0 0 No -16 0.54 No 48 50.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68765380 + NM_133509 RAD51B 0 . . . 0.66 74.8 28 5.66 Yes 71 0.14 No 0 0 No -28 0.68 Yes 51 46.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105175266 + NM_021930 RINT1 0 . . . 6.19 83.28 17 5.42 No -2 0.45 No 0 0 No -23 0.38 No 49 57.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23647104 - NM_024675 PALB2 0 . . . 0.75 0 21 5.02 No 51 -1.58 No 0 0 No -45 0.49 No 56 56.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68828778 + NM_004360 CDH1 0 . . . 7.28 85.02 37 4.64 No 60 -0.66 No 0 0 No -29 0.54 No 46 75.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41016411 + NM_001164269 RAD51 0 . . . 1.83 0 16 4.69 No 62 0.8 Yes 0 0 No -41 0.82 Yes 47 54.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68956431 + NM_133509 RAD51B 0 . . . 0.95 74.28 48 8.01 Yes 69 0.02 No 0 0 No -29 0.62 No 47 36.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40988339 + NM_001164269 RAD51 0 . . . 5.63 71.34 26 5.39 No 23 1.88 Yes 0 0 No -23 0.59 No 35 78.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69130737 + NM_133509 RAD51B 0 . . . 2.81 73.74 10 4.69 No 16 1.23 Yes 0 0 No -19 0.42 No 42 92.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68871398 + NM_133509 RAD51B 0 . . . 4.77 74.05 30 4.39 No 73 1.18 Yes 0 0 No -29 0.58 No 22 50 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68417955 + NM_133509 RAD51B 0 . . . 1.77 65.18 16 4.38 No 68 -4.27 No 0 0 No -37 0.56 No 47 57.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6026316 - NM_000535 PMS2 0 . . . 2.51 0 12 5.02 No 24 1.05 Yes 0 0 No -20 0.39 No 34 51.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108105866 + NM_000051 ATM 0 . . . 2.48 69.9 17 4.36 No 9 0.65 No 0 0 No -16 0.94 Yes 40 68.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84403755 - NM_139076 FAM175A 0 . . . 0.82 64.45 22 6.24 Yes 69 1.46 Yes 0 0 No -21 0.45 No 32 67.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41195023 - NM_007294 BRCA1 0 . . . 1.61 78.92 34 7.56 Yes 10 1.2 Yes 0 0 No -33 0.47 No 48 74.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37062011 + NM_000249 MLH1 0 . . . 2.88 72.35 48 7.21 Yes 30 0.79 Yes 0 0 No -36 0.71 Yes 28 95.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131957439 + NM_005732 RAD50 0 . . . 3.48 76.07 40 7.8 Yes 4 0.22 No 0 0 No -39 0.52 No 48 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68961680 + NM_133509 RAD51B 0 . . . 5.59 75.29 27 6.16 Yes 0 1.93 Yes 0 0 No -26 0.79 Yes 51 49.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94164913 - NM_005591 MRE11 0 . . . 1.87 58.24 18 5.35 No 49 0.85 Yes 0 0 No -22 0.47 No 49 81.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68680788 + NM_133509 RAD51B 0 . . . 7.59 72.21 16 5.2 No 27 0.48 No 0 0 No -24 0.34 No 43 87.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68955972 + NM_133509 RAD51B 0 . . . 1.49 68.47 10 4 No 49 0.22 No 0 0 No -37 0.88 Yes 53 47.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29086755 - NM_001005735 CHEK2 0 . . . 7.84 79.96 32 5.97 Yes 10 0.45 No 0 0 No -31 0.91 Yes 48 83.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68968016 + NM_133509 RAD51B 0 . . . 0.65 63.59 28 5.39 No 53 0.66 No 0 0 No -25 0.49 No 33 51.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7570515 - NM_000546 TP53 0 . . . 2.77 72.7 33 7.97 Yes 75 1.22 Yes 0 0 No -32 0.77 Yes 44 69.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190709560 + NM_000534 PMS1 0 . . . 3.89 81.18 19 4.98 No 53 1.26 Yes 0 0 No -18 0.81 Yes 47 75.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68776951 + NM_004360 CDH1 0 . . . 5.64 83.85 27 5.45 No 16 -0.53 No 0 0 No -26 0.77 Yes 50 33.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190708545 + NM_000534 PMS1 0 . . . 3.5 90.57 17 5.58 Yes 52 -3.95 No 0 0 No -25 0.36 No 47 48.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215645665 - NM_000465 BARD1 0 . . . 1.57 72.05 31 5.46 No 71 -3.2 No 0 0 No -23 0.92 Yes 49 71.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41241006 - NM_007294 BRCA1 0 . . . 0.89 63.05 14 5.57 Yes 25 1.12 Yes 0 0 No -24 0.49 No 33 26.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131920784 + NM_005732 RAD50 0 . . . 2.34 67.17 21 4.69 No 71 -5.96 No 0 0 No -20 0.96 Yes 29 77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21976351 - NM_000077 CDKN2A 0 . . . 4.16 86.51 15 6.71 Yes 2 0.96 Yes 0 0 No -29 0.7 Yes 16 70.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68915605 + NM_133509 RAD51B 0 . . . 0.41 59.77 26 5.48 No 76 0.47 No 0 0 No -28 0.68 Yes 59 42.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69056128 + NM_133509 RAD51B 0 . . . 3.51 78.64 19 4.09 No 55 2.58 Yes 0 0 No -18 0.49 No 24 28.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29132226 - NM_001005735 CHEK2 0 . . . 6.1 76.49 18 4.47 No 16 1.19 Yes 0 0 No -17 0.79 Yes 42 87.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21991899 - NM_000077 CDKN2A 0 . . . 0.64 0 22 5.74 Yes 15 0.56 No 0 0 No -21 0.83 Yes 43 91.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47628481 + NM_000251 MSH2 0 . . . 5.99 86.2 22 4.83 No 52 1.68 Yes 0 0 No -21 0.78 Yes 49 94.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47701668 + NM_000251 MSH2 0 . . . 1.48 68.14 59 5.66 Yes 30 -2.73 No 0 0 No -22 0.28 No 49 46.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68394907 + NM_133509 RAD51B 0 . . . 6.09 87.68 31 5.66 Yes 64 1.29 Yes 0 0 No -30 0.58 No 46 59.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33447120 - NM_002878 RAD51D 0 . . . 7.39 89.78 40 7.3 Yes 66 0.41 No 0 0 No -39 0.85 Yes 35 35.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41262177 - NM_007294 BRCA1 0 . . . 0.09 74.68 17 4.63 No 4 0.41 No 0 0 No -16 0.33 No 54 84.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89716737 + NM_000314 PTEN 0 . . . 3.7 65.06 20 5.49 No 21 1.3 Yes 0 0 No -24 0.45 No 37 93.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90967528 - NM_002485 NBN 0 . . . 0.9 71.9 26 5 No 73 -4.8 No 0 0 No -24 0.91 Yes 52 75.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68819337 + NM_133509 RAD51B 0 . . . 8.66 89.47 25 3.93 No 57 0.91 Yes 0 0 No -24 0.64 No 51 58.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59939971 - NM_032043 BRIP1 0 . . . 6.52 90.31 22 5.66 Yes 58 0.72 No 0 0 No -27 0.67 Yes 53 58.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68413360 + NM_133509 RAD51B 0 . . . 1.14 83.52 17 5.85 Yes 35 1.67 Yes 0 0 No -21 0.58 No 23 50.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47686825 + NM_000251 MSH2 0 . . . 2.33 86.9 17 4.47 No 33 1.17 Yes 0 0 No -16 0.83 Yes 50 68.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32911394 + NM_000059 BRCA2 0 . . . 3.82 61.31 15 5.66 Yes 1 -1.42 No 0 0 No -45 0.31 No 49 54.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59885234 - NM_032043 BRIP1 0 . . . 0.58 62.06 35 7.17 Yes 72 -6.2 No 0 0 No -34 0.86 Yes 43 49.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152351922 - NM_005431 XRCC2 0 . . . 5.19 71.45 17 4.53 No 8 0.69 No 0 0 No -46 0.68 Yes 43 60.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68387860 + NM_133509 RAD51B 0 . . . 2.31 68.23 20 5 No 51 -3.66 No 0 0 No -22 0.73 Yes 46 42.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41250422 - NM_007294 BRCA1 0 . . . 0.61 76.63 36 6.48 Yes 58 -3.88 No 0 0 No -31 0.47 No 48 75.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68755558 + NM_133509 RAD51B 0 . . . 0.95 69.42 11 4.12 No 47 0.54 No 0 0 No -27 0.86 Yes 50 80.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215643131 - NM_000465 BARD1 0 . . . 3.5 78.98 28 3.97 No 41 0.72 No 0 0 No -27 0.59 No 42 65.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37063781 + NM_000249 MLH1 0 . . . 5.48 76.79 34 5.54 No 67 0.71 No 0 0 No -23 0.84 Yes 41 34.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68478567 + NM_133509 RAD51B 0 . . . 0.03 65.97 28 6.16 Yes 70 0.39 No 0 0 No -34 0.62 No 60 64.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108209085 + NM_000051 ATM 0 . . . 3.16 76.33 35 8 Yes 15 0.48 No 0 0 No -27 0.72 Yes 43 64.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131964981 + NM_005732 RAD50 0 . . . 4.29 67.86 24 6.9 Yes 72 0.16 No 0 0 No -46 0.49 No 36 67.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59877335 - NM_032043 BRIP1 0 . . . 1.92 75.31 28 5.27 No 68 -3.06 No 0 0 No -23 0.75 Yes 49 51.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68745490 + NM_133509 RAD51B 0 . . . 2.44 77.01 20 3.51 No 24 1.27 Yes 0 0 No -23 0.91 Yes 46 62.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68962784 + NM_133509 RAD51B 0 . . . 5.9 81.43 23 4.04 No 50 1.64 Yes 0 0 No -49 0.57 No 42 80.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56796212 + NM_058216 RAD51C 0 . . . 5.65 75.78 24 4.88 No 15 1 Yes 0 0 No -23 0.73 Yes 48 53.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152341835 - NM_005431 XRCC2 0 . . . 4.68 81.23 48 7.05 Yes 7 1.12 Yes 0 0 No -26 0.33 No 41 82.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94192017 - NM_005591 MRE11 0 . . . 1.16 64.8 29 6.03 Yes 45 0.37 No 0 0 No -29 0.62 No 47 74.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89638095 + NM_000314 PTEN 0 . . . 3.15 68.34 21 5 No 21 1.71 Yes 0 0 No -20 0.47 No 37 81.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68800907 + NM_004360 CDH1 0 . . . 1.05 80.49 45 6.79 Yes 51 1.63 Yes 0 0 No -35 0.92 Yes 31 75.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108204746 + NM_000051 ATM 0 . . . 6.42 86.46 21 4.54 No 25 1.4 Yes 0 0 No -20 0.95 Yes 33 45.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108218880 + NM_000051 ATM 0 . . . 5.8 78.37 21 5.08 No 0 0.72 No 0 0 No -20 0.51 No 44 54.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68292683 + NM_133509 RAD51B 0 . . . 0.31 74.3 20 5.1 No -4 1.36 Yes 0 0 No -19 0.6 No 53 62.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69027672 + NM_133509 RAD51B 0 . . . 4.14 79.96 28 6.71 Yes 55 1.5 Yes 0 0 No -27 0.78 Yes 53 15.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69021610 + NM_133509 RAD51B 0 . . . 4.49 84.79 42 6.89 Yes 2 1.59 Yes 0 0 No -26 0.52 No 26 77.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56795068 + NM_058216 RAD51C 0 . . . 2.95 80.22 15 4.58 No 64 -5.08 No 0 0 No -31 0.6 No 47 38.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131911180 + NM_005732 RAD50 0 . . . 5.6 78.19 18 5.39 No 59 -2.38 No 0 0 No -22 0.51 No 37 64.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68372221 + NM_133509 RAD51B 0 . . . 2.57 76.95 23 4.88 No 3 0.4 No 0 0 No -22 0.81 Yes 43 83.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68877717 + NM_133509 RAD51B 0 . . . 4.79 82.34 14 4.47 No 20 -1.13 No 0 0 No -18 0.44 No 40 53.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37062318 + NM_000249 MLH1 0 . . . 1.46 76.65 17 5.82 Yes 41 -0.62 No 0 0 No -16 0.37 No 49 44.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59760489 - NM_032043 BRIP1 0 . . . 0 84.41 16 4.69 No 28 0.33 No 0 0 No -16 0.7 Yes 46 51.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56787918 + NM_058216 RAD51C 0 . . . 6.85 86.88 35 5.92 Yes -4 -1.42 No 0 0 No -28 0.51 No 40 85.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68412625 + NM_133509 RAD51B 0 . . . 2.77 71.23 30 5.74 Yes 65 0.08 No 0 0 No -27 0.64 No 48 77.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190670228 + NM_000534 PMS1 0 . . . 4.27 73.64 40 6.66 Yes -4 0.66 No 0 0 No -17 0.26 No 37 50.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56806377 + NM_058216 RAD51C 0 . . . 7.16 72.75 9 3.87 No 72 0.48 No 0 0 No -32 0.64 No 46 60.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6048760 - NM_000535 PMS2 0 . . . 3.73 66.47 18 4.87 No 63 -2.87 No 0 0 No -23 0.25 No 42 40.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108180170 + NM_000051 ATM 0 . . . 4.66 82.08 34 5.82 Yes 27 -1.19 No 0 0 No -33 0.37 No 51 61.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891879 + NM_133509 RAD51B 0 . . . 7.18 74.21 14 4.9 No 9 -1.52 No 0 0 No -17 0.5 No 51 84.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190652740 + NM_000534 PMS1 0 . . . 1.06 65.49 43 6.86 Yes 62 -5.39 No 0 0 No -23 0.62 No 45 86.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68901221 + NM_133509 RAD51B 0 . . . 0.39 65.3 40 5.4 No 57 0.4 No 0 0 No -27 0.71 Yes 49 45.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220193 - NM_007294 BRCA1 0 . . . 4.42 84.22 23 5.6 Yes 8 1.13 Yes 0 0 No -30 0.72 Yes 50 92.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68943041 + NM_133509 RAD51B 0 . . . 6.1 85.76 26 4.03 No 44 0.99 Yes 0 0 No -25 0.83 Yes 41 84.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190708103 + NM_000534 PMS1 0 . . . 3.22 79.52 28 5.35 No 61 0.28 No 0 0 No -26 0.41 No 11 34.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89659811 + NM_000314 PTEN 0 . . . 3.37 74.54 31 6.39 Yes 35 0.74 No 0 0 No -30 0.51 No 43 87.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37047788 + NM_000249 MLH1 0 . . . 2.48 68.93 16 5.84 Yes 21 1.7 Yes 0 0 No -21 0.47 No 37 67.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68463500 + NM_133509 RAD51B 0 . . . 4.89 71.76 30 5.37 No 30 0.85 Yes 0 0 No -26 0.54 No 21 39.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41248093 - NM_007294 BRCA1 0 . . . 4.29 75.77 18 5.29 No 73 0.11 No 0 0 No -18 0.61 No 47 77.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84395118 - NM_139076 FAM175A 0 . . . 2.19 80.12 22 4.93 No 17 1.2 Yes 0 0 No -21 0.37 No 41 95.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68563945 + NM_133509 RAD51B 0 . . . 3.41 80.79 15 4.26 No 38 0.59 No 0 0 No -28 0.33 No 35 63.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29093358 - NM_001005735 CHEK2 0 . . . 5.63 72.01 29 5.55 No 76 0.08 No 0 0 No -24 0.48 No 27 75.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68560322 + NM_133509 RAD51B 0 . . . 8.19 81.29 40 6.11 Yes 50 1.27 Yes 0 0 No -22 0.82 Yes 47 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131918812 + NM_005732 RAD50 0 . . . 1.12 74.46 28 4.44 No 24 0.45 No 0 0 No -31 0.62 No 47 50.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89717207 + NM_000314 PTEN 0 . . . 3.32 70.96 22 5.26 No 18 1.01 Yes 0 0 No -25 0.58 No 40 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89634067 + NM_000314 PTEN 0 . . . 0.61 68.8 35 6.57 Yes 65 1.48 Yes 0 0 No -34 0.86 Yes 48 49.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59792706 - NM_032043 BRIP1 0 . . . 3.36 69.55 20 5.41 No 29 0.82 Yes 0 0 No -27 0.32 No 44 67.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89639293 + NM_000314 PTEN 0 . . . 6.41 83.29 93 7.64 Yes 33 1.17 Yes 0 0 No -26 0.75 Yes 14 40.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68668692 + NM_133509 RAD51B 0 . . . 1.05 72.71 26 5.1 No 63 -6.06 No 0 0 No -25 0.69 Yes 17 35.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108187149 + NM_000051 ATM 0 . . . 1.64 70.96 24 4.88 No 72 0.57 No 0 0 No -21 0.47 No 51 65.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105185347 + NM_021930 RINT1 0 . . . 8.02 85.86 15 7.68 Yes 35 1.13 Yes 0 0 No -23 0.92 Yes 48 54.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59763687 - NM_032043 BRIP1 0 . . . 2.07 65.4 19 6.06 Yes 0 0.4 No 0 0 No -18 0.73 Yes 47 89.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68785562 + NM_133509 RAD51B 0 . . . 4.51 84.48 26 5.48 No 67 -2.26 No 0 0 No -25 0.8 Yes 49 62.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59879629 - NM_032043 BRIP1 0 . . . 2.67 79.31 15 4.38 No 72 -1.64 No 0 0 No -27 0.66 No 16 45.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68405061 + NM_133509 RAD51B 0 . . . 1.52 73.67 35 6.81 Yes 74 0.43 No 0 0 No -34 0.72 Yes 49 34.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68834660 + NM_004360 CDH1 0 . . . 0.51 74.3 26 6.08 Yes 17 -2.04 No 0 0 No -25 0.75 Yes 53 45.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68636913 + NM_133509 RAD51B 0 . . . 10.05 88.69 20 6.55 Yes 53 0.75 No 0 0 No -20 0.45 No 38 56.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1206223 + NM_000455 STK11 0 . . . 2.44 62.07 15 5.39 No NA NA NA 0 0 No -48 0.7 Yes 42 16.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75512775 - NM_001040108 MLH3 0 . . . 2.6 0 25 5.05 No 40 1.04 Yes 0 0 No -24 0.49 No 18 49.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108093746 + NM_000051 ATM 0 . . . 8.52 90.07 18 4.58 No 66 -3.21 No 0 0 No -45 0.44 No 42 54.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68952349 + NM_133509 RAD51B 0 . . . 5.47 74.19 27 4.02 No 31 1.2 Yes 0 0 No -26 0.88 Yes 41 54.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47744256 + NM_000251 MSH2 0 . . . 3.6 0 22 6.21 Yes 29 -2.26 No 0 0 No -21 0.85 Yes 44 55.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23630861 - NM_024675 PALB2 0 . . . 4 75.25 13 5.17 No 61 -4.64 No 0 0 No -24 0.57 No 49 52.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59898308 - NM_032043 BRIP1 0 . . . 8.2 85.05 33 5.95 Yes 48 0.95 Yes 0 0 No -32 0.89 Yes 36 70.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108091952 + NM_000051 ATM 0 . . . 3.67 67.72 18 4.8 No 37 -2.01 No 0 0 No -48 0.49 No 46 25.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32906726 + NM_000059 BRCA2 0 . . . 0.46 0 22 5.2 No 41 0.66 No 0 0 No -26 0.44 No 49 63.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190666485 + NM_000534 PMS1 0 . . . 4.53 77.64 26 6.63 Yes 15 0.67 No 0 0 No -25 0.94 Yes 43 80.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40989182 + NM_001164269 RAD51 0 . . . 2.8 71.97 21 3.62 No 18 1.17 Yes 0 0 No -20 0.82 Yes 40 84.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68480026 + NM_133509 RAD51B 0 . . . 5.48 87.04 12 4.8 No 67 -3.89 No 0 0 No -24 0.92 Yes 54 60.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56798302 + NM_058216 RAD51C 0 . . . 3.01 69.01 29 6.24 Yes 70 0.55 No 0 0 No -32 0.6 No 42 82.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108200755 + NM_000051 ATM 0 . . . 6.74 79.29 25 5.36 No -4 0.24 No 0 0 No -22 0.75 Yes 44 34.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21992690 - NM_000077 CDKN2A 0 . . . 1.86 68.49 24 5.43 No 67 0.33 No 0 0 No -23 0.75 Yes 42 59.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41244672 - NM_007294 BRCA1 0 . . . 1.6 0 24 4.34 No 64 -3.48 No 0 0 No -23 0.59 No 44 65.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59853762 - NM_032043 BRIP1 0 . . . 6.32 74.12 19 3.5 No 24 0.33 No 0 0 No -21 0.22 No 34 76.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68442177 + NM_133509 RAD51B 0 . . . 4.04 71.35 19 4.58 No 72 1.11 Yes 0 0 No -18 0.7 Yes 39 65.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68434637 + NM_133509 RAD51B 0 . . . 5.15 64.89 20 5.08 No 67 -2.18 No 0 0 No -24 0.51 No 45 81.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59889146 - NM_032043 BRIP1 0 . . . 4.01 85.14 20 5.1 No 65 1.23 Yes 0 0 No -23 0.38 No 51 83.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68817492 + NM_004360 CDH1 0 . . . 6.71 75.78 28 6.1 Yes 11 1.35 Yes 0 0 No -27 0.88 Yes 47 86.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56807414 + NM_058216 RAD51C 0 . . . 0.96 71.46 16 5.2 No 22 0.92 Yes 0 0 No -22 0.67 Yes 42 72.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6033415 - NM_000535 PMS2 0 . . . 1.49 79.98 20 4.43 No 9 1.03 Yes 0 0 No -19 0.41 No 49 87.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47762362 + NM_000251 MSH2 0 . . . 5.12 79.66 26 3.57 No 13 0.47 No 0 0 No -20 0.59 No 50 39.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59774695 - NM_032043 BRIP1 0 . . . 2.3 84.41 17 6.56 Yes 75 -1.69 No 0 0 No -16 0.7 Yes 29 74.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94154625 - NM_005591 MRE11 0 . . . 2.06 67.69 29 6.32 Yes 63 -4.13 No 0 0 No -28 0.94 Yes 50 47.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68879630 + NM_133509 RAD51B 0 . . . 4.51 72.86 21 6.42 Yes 58 -5.53 No 0 0 No -20 0.89 Yes 48 58.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68985312 + NM_133509 RAD51B 0 . . . 9.84 92.02 31 7.1 Yes 46 0.82 Yes 0 0 No -50 0.51 No 39 70.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68416740 + NM_133509 RAD51B 0 . . . 0.46 0 10 5.2 No 22 0.12 No 0 0 No -26 0.51 No 36 82.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190743616 + NM_000534 PMS1 0 . . . 3.9 75.26 32 6 Yes 63 0.52 No 0 0 No -31 0.88 Yes 54 61.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131908403 + NM_005732 RAD50 0 . . . 8.69 84.68 26 4.02 No 3 0.52 No 0 0 No -25 0.82 Yes 44 51.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68414265 + NM_133509 RAD51B 0 . . . 10.28 83.26 19 5.59 Yes 57 1.45 Yes 0 0 No -24 0.78 Yes 36 85.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59810321 - NM_032043 BRIP1 0 . . . 2.36 79.53 14 5.1 No 50 0.69 No 0 0 No -28 0.69 Yes 46 74.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190732044 + NM_000534 PMS1 0 . . . 2.3 60.89 30 5.85 Yes 58 0.78 Yes 0 0 No -34 0.45 No 32 77.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29131055 - NM_001005735 CHEK2 0 . . . 4.92 87.95 31 6.08 Yes 64 0.73 No 0 0 No -23 0.68 Yes 48 73.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68352357 + NM_133509 RAD51B 0 . . . 4.29 77.26 23 5.74 Yes 52 -3.05 No 0 0 No -22 0.66 No 46 91.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69112485 + NM_133509 RAD51B 0 . . . 4.19 72.89 26 5.2 No 61 0.96 Yes 0 0 No -26 0.53 No 44 74.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75491408 - NM_001040108 MLH3 0 . . . 0.27 70.32 22 5.28 No 18 0.48 No 0 0 No -21 0.78 Yes 40 79.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68785338 + NM_004360 CDH1 0 . . . 5.5 71.2 21 5.03 No 9 1.46 Yes 0 0 No -20 0.71 Yes 49 70.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68610660 + NM_133509 RAD51B 0 . . . 12.09 90.88 22 4.9 No 24 1.75 Yes 0 0 No -17 0.3 No 34 85.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68473631 + NM_133509 RAD51B 0 . . . 3.1 72.29 51 7.52 Yes 51 0.75 No 0 0 No -24 0.79 Yes 44 62.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105202878 + NM_021930 RINT1 0 . . . 6.79 86.44 31 5.34 No 7 1.13 Yes 0 0 No -22 0.62 No 46 86.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108167315 + NM_000051 ATM 0 . . . 7.48 89.32 23 6.03 Yes 23 1.55 Yes 0 0 No -22 0.89 Yes 40 63.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108135399 + NM_000051 ATM 0 . . . 0.76 67.02 17 5.18 No 68 1.55 Yes 0 0 No -20 0.64 No 53 23.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32926234 + NM_000059 BRCA2 0 . . . 0.76 0 20 5.57 Yes 54 1.67 Yes 0 0 No -19 0.76 Yes 49 36.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108146646 + NM_000051 ATM 0 . . . 7.8 73.19 21 5.15 No 15 0.08 No 0 0 No -20 0.71 Yes 43 50.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1226053 + NM_000455 STK11 0 . . . 12.37 86.84 12 5.66 Yes 75 1.13 Yes 0 0 No -18 0.36 No 44 78.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89671166 + NM_000314 PTEN 0 . . . 6.68 75.46 30 4 No 48 0.9 Yes 0 0 No -29 0.7 Yes 32 93.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131911707 + NM_005732 RAD50 0 . . . 1.29 0 25 5 No 14 0.67 No 0 0 No -27 0.52 No 44 80.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108116129 + NM_000051 ATM 0 . . . 0.89 75.67 31 7.98 Yes 2 0.2 No 0 0 No -30 0.86 Yes 45 84.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190736430 + NM_000534 PMS1 0 . . . 4.93 86.14 21 4.64 No 69 1.43 Yes 0 0 No -20 0.79 Yes 38 56.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41005987 + NM_001164269 RAD51 0 . . . 5.2 85.02 30 6.21 Yes 5 1.23 Yes 0 0 No -28 0.42 No 53 81.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56808366 + NM_058216 RAD51C 0 . . . 5.84 83.05 20 5.03 No 60 2.4 Yes 0 0 No -26 0.5 No 26 64.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69118595 + NM_133509 RAD51B 0 . . . 6.87 83.5 15 5.3 No 30 1.43 Yes 0 0 No -28 0.44 No 41 58.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68452598 + NM_133509 RAD51B 0 . . . 2.08 76.63 21 4.58 No 58 -3.88 No 0 0 No -20 0.77 Yes 48 57.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131955691 + NM_005732 RAD50 0 . . . 3.87 88.29 22 6.08 Yes 9 1.04 Yes 0 0 No -21 0.61 No 49 95.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68840787 + NM_004360 CDH1 0 . . . 2.82 62.59 31 4.8 No NA NA NA 0 0 No -19 0.44 No 36 62.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94149947 - NM_005591 MRE11 0 . . . 0.6 61.67 17 5.33 No -4 0.7 No 0 0 No -49 0.35 No 62 39.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47770526 + NM_000251 MSH2 0 . . . 2.61 61.43 33 5.52 No 68 0.43 No 0 0 No -25 0.61 No 33 72.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215663471 - NM_000465 BARD1 0 . . . 3.32 78.51 48 6.48 Yes 44 1.45 Yes 0 0 No -40 0.37 No 14 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68832745 + NM_004360 CDH1 0 . . . 4.63 77.39 17 4.8 No 64 -2.31 No 0 0 No -44 0.39 No 50 52.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68559461 + NM_133509 RAD51B 0 . . . 2.39 70.41 28 5.48 No 58 1.29 Yes 0 0 No -27 0.83 Yes 41 84.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68458150 + NM_133509 RAD51B 0 . . . 0.53 74.57 31 5.65 Yes 38 1.75 Yes 0 0 No -30 0.63 No 20 82.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32937759 + NM_000059 BRCA2 0 . . . 2.6 65.76 26 5.99 Yes 69 0.39 No 0 0 No -25 0.8 Yes 43 80.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41017111 + NM_001164269 RAD51 0 . . . 2.3 84.41 21 5.08 No 57 2.32 Yes 0 0 No -45 0.81 Yes 35 53.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69013834 + NM_133509 RAD51B 0 . . . 1.09 64.4 35 6.4 Yes 20 1.63 Yes 0 0 No -18 0.72 Yes 38 69.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131925514 + NM_005732 RAD50 0 . . . 0.97 71.56 26 5.2 No 71 -5.66 No 0 0 No -25 0.94 Yes 59 43.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47730163 + NM_000251 MSH2 0 . . . 8.12 85.9 19 8.44 Yes 2 0.9 Yes 0 0 No -24 0.63 No 39 69.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68654395 + NM_133509 RAD51B 0 . . . 3.95 81.31 24 5.37 No 10 0.48 No 0 0 No -23 0.52 No 48 72.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59909711 - NM_032043 BRIP1 0 . . . 2.54 65.59 23 5.3 No 10 0.74 No 0 0 No -36 0.79 Yes 48 43.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47700171 + NM_000251 MSH2 0 . . . 1.41 78.8 44 6.09 Yes 14 -2.06 No 0 0 No -28 0.47 No 29 47.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90992863 - NM_002485 NBN 0 . . . 2.3 74.87 31 10.24 Yes 33 0.25 No 0 0 No -30 0.95 Yes 34 80.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68594909 + NM_133509 RAD51B 0 . . . 4.11 72.6 35 5.91 Yes 64 -6.25 No 0 0 No -19 0.38 No 47 68.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40996515 + NM_001164269 RAD51 0 . . . 3.12 81.44 26 5.39 No 11 1.65 Yes 0 0 No -25 0.92 Yes 47 64.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68593754 + NM_133509 RAD51B 0 . . . 5.34 74.51 32 6.83 Yes 32 0.27 No 0 0 No -31 0.73 Yes 45 61.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68300064 + NM_133509 RAD51B 0 . . . 0.51 78.88 18 4.58 No 71 -5.28 No 0 0 No -17 0.81 Yes 48 58.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108196430 + NM_000051 ATM 0 . . . 4.04 68.36 27 5.23 No 18 0.5 No 0 0 No -26 0.77 Yes 47 63.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90998512 - NM_002485 NBN 0 . . . 2.27 75.07 15 6.52 Yes 15 0.65 No 0 0 No -24 0.47 No 35 63.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40985432 + NM_001164269 RAD51 0 . . . 2.75 78.59 16 4.24 No 31 1.36 Yes 0 0 No -15 0.31 No 47 66.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104176613 - NM_001100119 XRCC3 0 . . . 3.78 68.54 35 5.83 Yes 48 1.66 Yes 0 0 No -25 0.5 No 19 59.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108237902 + NM_000051 ATM 0 . . . 0.85 83.69 19 5 No 10 1.25 Yes 0 0 No -18 0.58 No 48 90.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68568621 + NM_133509 RAD51B 0 . . . 1.79 69 21 5.16 No 12 -1.06 No 0 0 No -20 0.83 Yes 46 86.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33441375 - NM_002878 RAD51D 0 . . . 2.02 71.96 16 4.69 No 65 -2.13 No 0 0 No -15 0.17 No 51 28.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69087496 + NM_133509 RAD51B 0 . . . 10.69 84.13 12 5.57 Yes 4 1.68 Yes 0 0 No -24 0.4 No 46 62.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47695517 + NM_000251 MSH2 0 . . . 6.7 92.27 11 4.12 No 33 0.85 Yes 0 0 No -21 0.46 No 47 45.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69078589 + NM_133509 RAD51B 0 . . . 0.05 61.44 25 4.99 No -4 1.24 Yes 0 0 No -22 0.52 No 62 34.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84387570 - NM_139076 FAM175A 0 . . . 8.09 87.62 23 5.33 No 50 1.15 Yes 0 0 No -27 0.64 No 42 56.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190714711 + NM_000534 PMS1 0 . . . 6.09 86.38 40 7.46 Yes 8 0.23 No 0 0 No -39 0.62 No 50 83.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68982685 + NM_133509 RAD51B 0 . . . 4.72 85.02 30 5.05 No 72 0.85 Yes 0 0 No -29 0.68 Yes 42 59.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68463473 + NM_133509 RAD51B 0 . . . 5.17 83.01 17 5.56 Yes 3 0.85 Yes 0 0 No -28 0.39 No 48 62.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68789233 + NM_133509 RAD51B 0 . . . 4.74 72.39 25 4.86 No 30 0.67 No 0 0 No -34 0.3 No 45 83.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68809492 + NM_004360 CDH1 0 . . . 7.28 75.03 33 5.91 Yes 68 1.04 Yes 0 0 No -28 0.62 No 45 65.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68958473 + NM_133509 RAD51B 0 . . . 6.1 82.58 28 5.27 No 10 0.72 No 0 0 No -44 0.77 Yes 48 79.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47742169 + NM_000251 MSH2 0 . . . 5.47 67.41 38 7.83 Yes 69 -4.39 No 0 0 No -37 0.9 Yes 43 71.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90972393 - NM_002485 NBN 0 . . . 3.42 75.78 12 5.27 No 8 0.24 No 0 0 No -22 0.31 No 50 52.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68687313 + NM_133509 RAD51B 0 . . . 4.61 72.47 9 3.87 No 8 1.17 Yes 0 0 No -37 0.39 No 44 59.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69024728 + NM_133509 RAD51B 0 . . . 1.67 84.66 24 5.1 No 73 -3.91 No 0 0 No -23 0.67 Yes 63 39.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23650232 - NM_024675 PALB2 0 . . . 5.57 87.89 37 6.24 Yes 4 1.52 Yes 0 0 No -20 0.4 No 43 56.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69080554 + NM_133509 RAD51B 0 . . . 3.38 74.56 26 5.2 No 37 0.37 No 0 0 No -25 0.84 Yes 44 82.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59893863 - NM_032043 BRIP1 0 . . . 3.77 75.75 19 4.89 No 72 0.65 No 0 0 No -28 0.46 No 49 64.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94210061 - NM_005591 MRE11 0 . . . 2.18 69.46 16 5.14 No 51 -2.87 No 0 0 No -21 0.52 No 41 48.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152347301 - NM_005431 XRCC2 0 . . . 4.72 77.73 26 5.38 No 25 0.08 No 0 0 No -56 0.66 No 44 73.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68570264 + NM_133509 RAD51B 0 . . . 3.52 69.94 22 4.56 No 11 0.87 Yes 0 0 No -21 0.9 Yes 39 81.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89679211 + NM_000314 PTEN 0 . . . 2.41 66.21 35 6.65 Yes 46 1.21 Yes 0 0 No -34 0.71 Yes 36 60.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89690714 + NM_000314 PTEN 0 . . . 2.87 66.51 26 4.99 No 70 0.72 No 0 0 No -25 0.68 Yes 39 60.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32933330 + NM_000059 BRCA2 0 . . . 2.08 76.63 17 5.25 No 71 -4.64 No 0 0 No -22 0.68 Yes 39 43.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68787132 + NM_133509 RAD51B 0 . . . 4.55 76.13 9 5.37 No 62 1.17 Yes 0 0 No -48 0.49 No 40 64.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59858893 - NM_032043 BRIP1 0 . . . 1.3 66.32 17 4.46 No 74 1.22 Yes 0 0 No -25 0.25 No 50 48.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68387694 + NM_133509 RAD51B 0 . . . 7.59 75.33 15 5.04 No 72 -4.24 No 0 0 No -28 0.86 Yes 52 60.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68357045 + NM_133509 RAD51B 0 . . . 0.1 65.25 14 5.11 No 44 -4.29 No 0 0 No -20 0.67 Yes 40 30 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6018826 - NM_000535 PMS2 0 . . . 3.01 0 14 5 No 36 1.07 Yes 0 0 No -29 0.52 No 34 69.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32939301 + NM_000059 BRCA2 0 . . . 6.26 74.65 32 6.04 Yes 57 1.7 Yes 0 0 No -32 0.58 No 11 78.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89676113 + NM_000314 PTEN 0 . . . 1.15 0 46 7.58 Yes 61 1.2 Yes 0 0 No -20 0.7 Yes 37 62.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68396306 + NM_133509 RAD51B 0 . . . 7.94 74.81 32 5.63 Yes 12 0.63 No 0 0 No -31 0.69 Yes 46 60.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69141796 + NM_133509 RAD51B 0 . . . 7.11 78.95 33 5.3 No 5 0.76 No 0 0 No -19 0.67 Yes 53 63.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29094456 - NM_001005735 CHEK2 0 . . . 4.41 84.17 39 6.12 Yes 41 0.45 No 0 0 No -27 0.73 Yes 47 62.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23640221 - NM_024675 PALB2 0 . . . 2.19 77.37 15 4.89 No 49 1.02 Yes 0 0 No -12 0.16 No 54 69.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104177772 - NM_001100119 XRCC3 0 . . . 2.32 83.92 41 6.86 Yes -1 0.13 No 0 0 No -34 0.49 No 59 41.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68391213 + NM_133509 RAD51B 0 . . . 1.75 67.65 23 4.81 No 68 0.13 No 0 0 No -22 0.79 Yes 46 24.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68560459 + NM_133509 RAD51B 0 . . . 6.36 77.1 23 5.87 Yes 64 0.76 No 0 0 No -22 0.9 Yes 47 83.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69121054 + NM_133509 RAD51B 0 . . . 4.68 71.61 25 4.95 No 49 0.46 No 0 0 No -24 0.94 Yes 39 58.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68363489 + NM_133509 RAD51B 0 . . . 5.1 76.95 42 7.66 Yes 24 0.62 No 0 0 No -41 0.52 No 42 60.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68845617 + NM_133509 RAD51B 0 . . . 3.6 61.81 28 4.49 No 40 0.68 No 0 0 No -27 0.54 No 18 82.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47755439 + NM_000251 MSH2 0 . . . 10.65 88.61 35 5.91 Yes 31 1.06 Yes 22 0.9 Yes -28 0.91 Yes 48 83.32 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68522868 + NM_133509 RAD51B 0 . . . 0.7 77.26 26 6 Yes 5 0.48 No 0 0 No -25 0.63 No 53 63.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47762222 + NM_000251 MSH2 0 . . . 0.03 70.3 22 4.89 No 41 -2.37 No 0 0 No -21 0.73 Yes 54 26.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47687081 + NM_000251 MSH2 0 . . . 4.71 0 20 3.64 No 56 2.85 Yes 0 0 No -20 0.84 Yes 42 73.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90959360 - NM_002485 NBN 0 . . . 1.81 59.06 61 7.78 Yes 55 1.11 Yes 0 0 No -34 0.72 Yes 39 65.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68917054 + NM_133509 RAD51B 0 . . . 5.58 86.71 44 7.35 Yes 33 1.26 Yes 0 0 No -23 0.79 Yes 25 32.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41204461 - NM_007294 BRCA1 0 . . . 1.33 66.86 22 5.2 No 10 -2.32 No 0 0 No -21 0.39 No 36 64.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68751864 + NM_133509 RAD51B 0 . . . 7.24 68.57 20 8.82 Yes -3 0.06 No 0 0 No -19 0.77 Yes 48 68.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94221207 - NM_005591 MRE11 0 . . . 6.99 78.81 22 4.47 No 13 1.53 Yes 0 0 No -27 0.7 Yes 39 68.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59870958 - NM_032043 BRIP1 0 . . . 10.82 92.45 19 5.38 No 15 0.57 No 0 0 No -27 0.37 No 43 91.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47628407 + NM_000251 MSH2 0 . . . 2.3 84.41 32 7.01 Yes 35 0.58 No 0 0 No -32 0.42 No 36 66.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6049096 - NM_000535 PMS2 0 . . . 2.64 59.99 31 6.08 Yes NA NA NA 0 0 No -30 0.56 No 48 55.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59794262 - NM_032043 BRIP1 0 . . . 4.82 76.62 22 6.58 Yes 3 0.33 No 0 0 No -25 0.64 No 47 66.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68605462 + NM_133509 RAD51B 0 . . . 3.46 67.88 43 7.17 Yes 46 1.06 Yes 0 0 No -31 0.33 No 42 83.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215643899 - NM_000465 BARD1 0 . . . 3.13 79.04 43 4.11 No 12 0.84 Yes 0 0 No -27 0.89 Yes 46 77.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47667239 + NM_000251 MSH2 0 . . . 0.39 65.56 51 6.67 Yes 42 1.02 Yes 0 0 No -27 0.82 Yes 61 43.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47703042 + NM_000251 MSH2 0 . . . 1.9 83.81 39 6.71 Yes 38 1.15 Yes 0 0 No -36 0.36 No 48 58.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33429102 - NM_002878 RAD51D 0 . . . 4.96 91.11 36 5.72 Yes 58 1.02 Yes 0 0 No -25 0.54 No 48 68.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21973641 - NM_000077 CDKN2A 0 . . . 4.9 84.79 13 4.9 No 71 2.19 Yes 0 0 No -46 0.74 Yes 38 58.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68969247 + NM_133509 RAD51B 0 . . . 1.35 61.58 15 5.28 No 1 -0.49 No 0 0 No -14 0.21 No 50 13.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69060016 + NM_133509 RAD51B 0 . . . 3.7 68.81 31 5.49 No 16 1.09 Yes 0 0 No -30 0.69 Yes 42 71.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68408863 + NM_133509 RAD51B 0 . . . 5.17 75.62 34 5.92 Yes 16 -2.84 No 0 0 No -28 0.64 No 43 77.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68322283 + NM_133509 RAD51B 0 . . . 5.39 86.28 41 7.86 Yes 76 0.79 Yes 0 0 No -22 0.32 No 44 66.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89688001 + NM_000314 PTEN 0 . . . 6.49 82.03 31 7.31 Yes 10 0.28 No 0 0 No -31 0.3 No 48 80.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68822290 + NM_004360 CDH1 0 . . . 1.48 74.42 22 4.69 No 33 0.02 No 0 0 No -24 0.6 No 51 74.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131940781 + NM_005732 RAD50 0 . . . 4.89 86.67 24 5.83 Yes 39 0.57 No 0 0 No -23 0.51 No 19 70.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68913166 + NM_133509 RAD51B 0 . . . 7.57 88.7 45 7.48 Yes 54 1.42 Yes 0 0 No -30 0.67 Yes 48 57.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47707724 + NM_000251 MSH2 0 . . . 1.51 69.96 21 4.83 No 0 0.56 No 0 0 No -23 0.79 Yes 42 70.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68404339 + NM_133509 RAD51B 0 . . . 3.53 81 21 4.56 No 66 0.51 No 0 0 No -20 0.6 No 51 32.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69095737 + NM_133509 RAD51B 0 . . . 3.53 76.88 15 4.58 No 71 -3.63 No 0 0 No -37 0.68 Yes 43 28.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68499801 + NM_133509 RAD51B 0 . . . 4.7 76.96 15 4.58 No 64 1.55 Yes 0 0 No -19 0.54 No 47 64.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47633530 + NM_000251 MSH2 0 . . . 0.93 75.62 14 4.62 No 41 1.07 Yes 0 0 No -19 0.38 No 17 63.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59802215 - NM_032043 BRIP1 0 . . . 2.09 69.56 17 4.22 No 61 1.47 Yes 0 0 No -28 0.65 No 48 48.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94225263 - NM_005591 MRE11 0 . . . 3.1 78.47 23 4.78 No 53 -2.42 No 0 0 No -25 0.86 Yes 47 82.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90949254 - NM_002485 NBN 0 . . . 7.94 78.51 26 7.21 Yes 1 1.36 Yes 0 0 No -25 0.89 Yes 37 32.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108186922 + NM_000051 ATM 0 . . . 1 72.68 30 5.29 No 23 0.71 No 0 0 No -26 0.64 No 45 75.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41214436 - NM_007294 BRCA1 0 . . . 3.83 73.27 19 5 No 1 0.98 Yes 0 0 No -23 0.57 No 45 51.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68703034 + NM_133509 RAD51B 0 . . . 1.16 70.51 20 5.1 No 76 -4.67 No 0 0 No -24 0.78 Yes 46 59.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7567640 - NM_000546 TP53 0 . . . 0.09 74.68 24 4.7 No 4 0.41 No 0 0 No -23 0.8 Yes 54 61.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6024130 - NM_000535 PMS2 0 . . . 2.16 0 22 4.58 No 53 0.78 Yes 0 0 No -21 0.74 Yes 42 66.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32921906 + NM_000059 BRCA2 0 . . . 3.35 66.91 35 6 Yes -3 1.29 Yes 0 0 No -32 0.34 No 31 69.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68364869 + NM_133509 RAD51B 0 . . . 2.25 75.09 38 5.37 No 23 0.74 No 0 0 No -24 0.35 No 48 95.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68431484 + NM_133509 RAD51B 0 . . . 2.23 64.37 19 4.9 No 67 -6.66 No 0 0 No -25 0.57 No 43 63.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40997987 + NM_001164269 RAD51 0 . . . 5.9 83.82 32 7.06 Yes 7 1.34 Yes 0 0 No -31 0.74 Yes 51 87.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68785260 + NM_133509 RAD51B 0 . . . 7.17 86.6 21 5.57 Yes 0 1.19 Yes 0 0 No -24 0.48 No 44 62.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59822448 - NM_032043 BRIP1 0 . . . 3.19 65.24 29 5.19 No 73 1.31 Yes 0 0 No -28 0.56 No 47 38.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68321801 + NM_133509 RAD51B 0 . . . 1.76 80.12 25 5.29 No 52 -2.68 No 0 0 No -24 0.9 Yes 48 73.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47762313 + NM_000251 MSH2 0 . . . 2.55 74.91 11 4.69 No 50 0.63 No 0 0 No -23 0.64 No 14 48.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75481854 - NM_001040108 MLH3 0 . . . 6.21 87.01 14 3.84 No 37 0.96 Yes 0 0 No -26 0.86 Yes 44 73.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68641275 + NM_133509 RAD51B 0 . . . 2.39 74.36 34 5.73 Yes 17 0.75 No 0 0 No -27 0.76 Yes 29 37.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105209584 + NM_021930 RINT1 0 . . . 2.73 76.18 20 5 No 68 1.24 Yes 0 0 No -18 0.5 No 46 34.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59791605 - NM_032043 BRIP1 0 . . . 6.08 73.61 30 5.92 Yes 72 -5.05 No 0 0 No -29 0.73 Yes 63 35.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47663511 + NM_000251 MSH2 0 . . . 1.45 75.08 17 5.8 Yes 72 0.69 No 0 0 No -19 0.3 No 38 72.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94159102 - NM_005591 MRE11 0 . . . 1.68 66.65 24 5.83 Yes -2 0.81 Yes 0 0 No -23 0.51 No 46 73.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68779367 + NM_133509 RAD51B 0 . . . 7.96 88.05 30 4.49 No 17 0.87 Yes 0 0 No -32 0.5 No 41 57.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69023387 + NM_133509 RAD51B 0 . . . 7.3 80.36 20 5.57 Yes 73 -5.12 No 0 0 No -24 0.52 No 45 84.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6035967 - NM_000535 PMS2 0 . . . 6.24 82.31 25 5.05 No 59 1.17 Yes 0 0 No -25 0.69 Yes 55 57.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59799994 - NM_032043 BRIP1 0 . . . 5.5 74.78 19 4.58 No 22 0.41 No 0 0 No -18 0.9 Yes 44 57.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47773767 + NM_000251 MSH2 0 . . . 1.78 76.63 17 5.82 Yes 58 0.02 No 0 0 No -34 0.48 No 50 62.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59816514 - NM_032043 BRIP1 0 . . . 1.14 73.62 32 5.57 Yes 30 1.05 Yes 0 0 No -26 0.55 No 28 44.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68767017 + NM_133509 RAD51B 0 . . . 4.33 89.25 25 6.32 Yes 23 1.58 Yes 0 0 No -24 0.91 Yes 49 92.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68570633 + NM_133509 RAD51B 0 . . . 4.65 81.47 19 5.11 No 9 0.18 No 0 0 No -18 0.59 No 49 77.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68342284 + NM_133509 RAD51B 0 . . . 0.55 73.05 22 5.29 No 61 0.64 No 0 0 No -21 0.59 No 41 61.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89679530 + NM_000314 PTEN 0 . . . 8.5 83.14 26 6.16 Yes 31 0.07 No 0 0 No -26 0.61 No 34 87.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41221311 - NM_007294 BRCA1 0 . . . 0.87 69.63 28 5.74 Yes -3 0.01 No 0 0 No -27 0.48 No 42 83.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68565402 + NM_133509 RAD51B 0 . . . 7.64 92.05 17 4.8 No 58 0.2 No 0 0 No -48 0.43 No 49 70.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68809364 + NM_004360 CDH1 0 . . . 3.23 82.06 23 3.69 No 50 -2.88 No 0 0 No -22 0.85 Yes 21 45.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108230878 + NM_000051 ATM 0 . . . 1.63 68.82 23 5.09 No 58 -5 No 0 0 No -22 0.77 Yes 47 41.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84394196 - NM_139076 FAM175A 0 . . . 2.68 78.47 33 6.24 Yes 76 1.08 Yes 0 0 No -37 0.47 No 51 70.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68529108 + NM_133509 RAD51B 0 . . . 7 83.34 15 4.53 No 47 -1.59 No 0 0 No -57 0.48 No 27 75.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29125172 - NM_001005735 CHEK2 0 . . . 2.7 78.88 14 3.5 No 35 1.11 Yes 0 0 No -40 0.53 No 48 64.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215673522 - NM_000465 BARD1 0 . . . 7.05 70.75 32 7.36 Yes 38 0.83 Yes 0 0 No -27 0.58 No 37 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68538315 + NM_133509 RAD51B 0 . . . 4.65 84.77 18 5.72 Yes 70 0.61 No 0 0 No -17 0.43 No 27 45.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68954306 + NM_133509 RAD51B 0 . . . 5.23 80.9 25 6.56 Yes 38 1.46 Yes 0 0 No -27 0.77 Yes 44 58.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75502273 - NM_001040108 MLH3 0 . . . 2.04 72.59 33 4.7 No 70 -5.57 No 0 0 No -32 0.64 No 52 59.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41202020 - NM_007294 BRCA1 0 . . . 2.26 59.99 16 6.69 Yes 44 0.74 No 0 0 No -42 0.55 No 41 49.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68436023 + NM_133509 RAD51B 0 . . . 3.62 64.76 24 6.98 Yes 70 -4.85 No 0 0 No -23 0.66 Yes 13 36.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68776854 + NM_133509 RAD51B 0 . . . 2.77 72.08 15 5.75 Yes 46 0.95 Yes 0 0 No -30 0.79 Yes 43 47.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68639774 + NM_133509 RAD51B 0 . . . 0.46 59.91 23 6.11 Yes 55 0.08 No 0 0 No -22 0.63 No 45 68.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41243439 - NM_007294 BRCA1 0 . . . 0.65 70.77 43 5.38 No 72 -5.83 No 0 0 No -37 0.77 Yes 49 42.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59891786 - NM_032043 BRIP1 0 . . . 10.49 88.87 27 5.38 No 14 0.8 Yes 0 0 No -26 0.67 Yes 44 74.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94168554 - NM_005591 MRE11 0 . . . 5.18 80.12 26 3.34 No 8 1.21 Yes 0 0 No -20 0.27 No 50 88.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68435276 + NM_133509 RAD51B 0 . . . 0.89 66.9 14 5.15 No 27 1.01 Yes 0 0 No -25 0.56 No 18 41.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68561310 + NM_133509 RAD51B 0 . . . 4.76 85.91 14 4.85 No 55 0.18 No 0 0 No -23 0.57 No 46 59.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37045096 + NM_000249 MLH1 0 . . . 4.5 72.39 20 4.74 No 12 1.45 Yes 0 0 No -40 0.47 No 46 72.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84401644 - NM_139076 FAM175A 0 . . . 2.67 66.07 27 6.36 Yes 76 0.66 No 0 0 No -29 0.94 Yes 48 26.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6043797 - NM_000535 PMS2 0 . . . 2.21 76.51 19 5.16 No 66 -5.75 No 0 0 No -24 0.9 Yes 48 71.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68795418 + NM_133509 RAD51B 0 . . . 1.11 0 28 4.75 No 60 2.06 Yes 0 0 No -28 0.55 No 50 48.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68360359 + NM_133509 RAD51B 0 . . . 2.91 77.77 14 6.08 Yes 40 -2.96 No 0 0 No -32 0.5 No 47 62.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89716308 + NM_000314 PTEN 0 . . . 9.76 86.23 21 5.1 No 74 0.75 No 0 0 No -31 0.68 Yes 49 57.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59902411 - NM_032043 BRIP1 0 . . . 1.63 78.4 12 4 No 11 1.64 Yes 0 0 No -28 0.74 Yes 47 86.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215615501 - NM_000465 BARD1 0 . . . 4.85 68.18 69 8.66 Yes 36 0.62 No 0 0 No -55 0.14 No 40 69.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68643466 + NM_133509 RAD51B 0 . . . 7.18 79.16 17 6.12 Yes 71 0.78 Yes 0 0 No -31 0.71 Yes 40 56.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108101639 + NM_000051 ATM 0 . . . 2.71 78.28 21 4.19 No 33 1.16 Yes 0 0 No -20 0.5 No 40 60.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68548779 + NM_133509 RAD51B 0 . . . 1.38 71.4 26 5.83 Yes 16 1.11 Yes 0 0 No -30 0.85 Yes 42 93.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68993409 + NM_133509 RAD51B 0 . . . 1.54 74.98 28 3.98 No 25 2.07 Yes 0 0 No -27 0.61 No 49 41.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68516790 + NM_133509 RAD51B 0 . . . 4.13 82.15 15 5.6 Yes 15 1.15 Yes 0 0 No -24 0.46 No 43 94.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59841584 - NM_032043 BRIP1 0 . . . 5.28 82.68 16 6.05 Yes 3 0.48 No 0 0 No -29 0.68 Yes 13 63.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190670432 + NM_000534 PMS1 0 . . . 1 0 50 7.21 Yes 38 -3.72 No 0 0 No -49 0.61 No 51 51.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68958612 + NM_133509 RAD51B 0 . . . 0.14 63.19 16 5.53 No 51 1.41 Yes 0 0 No -16 0.6 No 41 57.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59836909 - NM_032043 BRIP1 0 . . . 2.53 69.03 75 8.95 Yes 0 0.82 Yes 0 0 No -17 0.44 No 48 73.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89633076 + NM_000314 PTEN 0 . . . 0.32 0 23 5.19 No 1 1.31 Yes 0 0 No -22 0.7 Yes 27 36.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68809980 + NM_004360 CDH1 0 . . . 10.54 84.66 26 5.09 No 15 0.7 No 0 0 No -25 0.43 No 43 90.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48018378 + NM_000179 MSH6 0 . . . 3.79 83.05 19 4.93 No 5 0.2 No 0 0 No -18 0.46 No 53 34.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90979480 - NM_002485 NBN 0 . . . 5.87 93.39 19 6.18 Yes 72 -4.68 No 0 0 No -28 0.51 No 48 75.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215630421 - NM_000465 BARD1 0 . . . 4.18 85.33 47 6.21 Yes 65 -1.01 No 0 0 No -26 0.95 Yes 49 71.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89632430 + NM_000314 PTEN 0 . . . 0.67 80.77 21 6.07 Yes 18 1.14 Yes 0 0 No -20 0.73 Yes 25 50.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59931967 - NM_032043 BRIP1 0 . . . 1.41 84.22 32 5.08 No 33 0.99 Yes 0 0 No -25 0.68 Yes 50 62.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68463726 + NM_133509 RAD51B 0 . . . 3.63 76.7 12 3.97 No 24 0.38 No 0 0 No -26 0.41 No 39 48.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68604882 + NM_133509 RAD51B 0 . . . 0.84 0 19 4.24 No 74 -2.7 No 0 0 No -30 0.5 No 41 87.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69038779 + NM_133509 RAD51B 0 . . . 1.89 71.52 38 6.24 Yes 2 0.21 No 0 0 No -37 0.83 Yes 56 68.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68508755 + NM_133509 RAD51B 0 . . . 0.87 60.66 17 4.63 No -2 0.29 No 0 0 No -17 0.3 No 43 56.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32890219 + NM_000059 BRCA2 0 . . . 4.14 71.53 21 5.17 No 17 -1.95 No 0 0 No -24 0.61 No 41 85.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23642418 - NM_024675 PALB2 0 . . . 4.02 80.12 24 4.8 No 23 1.67 Yes 0 0 No -19 0.53 No 35 95.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69118159 + NM_133509 RAD51B 0 . . . 0.11 80.49 28 5.2 No 27 0.89 Yes 0 0 No -27 0.79 Yes 26 40.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68736257 + NM_133509 RAD51B 0 . . . 5.6 81.72 17 4.24 No 3 1.08 Yes 0 0 No -28 0.85 Yes 49 85.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131961613 + NM_005732 RAD50 0 . . . 2.21 84.41 25 6.96 Yes 51 0.59 No 0 0 No -24 0.68 Yes 44 42.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68516660 + NM_133509 RAD51B 0 . . . 2.26 62.51 21 4.82 No 17 0.76 No 0 0 No -20 0.69 Yes 41 90.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68627666 + NM_133509 RAD51B 0 . . . 1.35 65.88 26 5.27 No 40 0.25 No 0 0 No -26 0.74 Yes 41 71.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89656523 + NM_000314 PTEN 0 . . . 6.68 81.82 32 6.83 Yes 8 0.87 Yes 0 0 No -24 0.4 No 40 55.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68529127 + NM_133509 RAD51B 0 . . . 1.05 72.81 32 5.59 Yes 3 0.08 No 0 0 No -23 0.61 No 49 49.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32896152 + NM_000059 BRCA2 0 . . . 1.44 65.5 29 6.32 Yes -2 1.1 Yes 0 0 No -28 0.95 Yes 31 43.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89719382 + NM_000314 PTEN 0 . . . 3.99 70.8 22 5.1 No 13 0.42 No 0 0 No -19 0.5 No 41 47.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68507578 + NM_133509 RAD51B 0 . . . 0.38 0 26 5.6 Yes 21 0.63 No 0 0 No -25 0.7 Yes 55 32.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108205012 + NM_000051 ATM 0 . . . 2.24 72.84 37 7.21 Yes 5 0.54 No 0 0 No -36 0.79 Yes 41 81.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69034129 + NM_133509 RAD51B 0 . . . 4.28 70.62 13 4.8 No 16 0.8 Yes 0 0 No -47 0.59 No 42 93.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131946290 + NM_005732 RAD50 0 . . . 1.64 62.76 12 4.69 No 64 0.91 Yes 0 0 No -15 0.26 No 43 84.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104167889 - NM_001100119 XRCC3 0 . . . 1.01 61.02 24 4.78 No 46 0.35 No 0 0 No -43 0.42 No 46 76.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68375750 + NM_133509 RAD51B 0 . . . 6.32 74.35 27 5.38 No 16 0.61 No 0 0 No -26 0.62 No 42 69.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105188960 + NM_021930 RINT1 0 . . . 7.93 74.1 33 6.45 Yes 47 1.05 Yes 29 0.76 Yes -32 0.56 No 47 51.53 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 68344180 + NM_133509 RAD51B 0 . . . 5.57 81.85 19 4.58 No 73 0.77 Yes 0 0 No -38 0.55 No 47 63.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68502272 + NM_133509 RAD51B 0 . . . 3.02 0 19 5.18 No 7 0.8 Yes 0 0 No -25 0.71 Yes 51 84.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131959060 + NM_005732 RAD50 0 . . . 0.05 70.48 19 5.39 No 56 0.56 No 0 0 No -18 0.44 No 46 70.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7582942 - NM_000546 TP53 0 . . . 4.85 72.25 20 6.15 Yes 54 1.95 Yes 0 0 No -26 0.45 No 44 90.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68881807 + NM_133509 RAD51B 0 . . . 0.39 71.57 14 4.44 No 67 0.41 No 0 0 No -43 0.65 No 51 53.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89624057 + NM_000314 PTEN 0 . . . 1.67 69.35 13 3.87 No 25 -1.97 No 0 0 No -44 0.84 Yes 17 15.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68442038 + NM_133509 RAD51B 0 . . . 1.98 70.55 16 5.29 No 62 1.22 Yes 0 0 No -26 0.49 No 34 80.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108151345 + NM_000051 ATM 0 . . . 2.56 74.02 17 5.28 No 69 -1.92 No 0 0 No -22 0.68 Yes 46 44.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215663716 - NM_000465 BARD1 0 . . . 1.52 82.85 15 4.58 No 27 0.68 No 0 0 No -25 0.43 No 44 84.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108181326 + NM_000051 ATM 0 . . . 5.36 70.25 59 8.76 Yes 13 0.11 No 0 0 No -26 0.42 No 44 75.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68356498 + NM_133509 RAD51B 0 . . . 1.04 70.92 33 4.68 No 2 0.7 No 0 0 No -28 0.78 Yes 41 46.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94220180 - NM_005591 MRE11 0 . . . 1.26 77.67 15 4.33 No 36 0.46 No 0 0 No -27 0.48 No 49 74.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68516235 + NM_133509 RAD51B 0 . . . 0.91 66.29 22 7.25 Yes 6 0.05 No 0 0 No -25 0.52 No 52 62.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68973415 + NM_133509 RAD51B 0 . . . 2.32 73.55 25 5.51 No 71 -2.51 No 0 0 No -24 0.75 Yes 54 50.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68795073 + NM_133509 RAD51B 0 . . . 7.55 75.09 18 4.89 No 49 1.8 Yes 0 0 No -22 0.52 No 43 56.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37052366 + NM_000249 MLH1 0 . . . 3.9 79.11 19 3.63 No 74 0.73 No 0 0 No -37 0.43 No 37 87.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152354076 - NM_005431 XRCC2 0 . . . 3.19 70.85 22 5.29 No 23 1.58 Yes 0 0 No -21 0.73 Yes 45 74.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47723062 + NM_000251 MSH2 0 . . . 1.07 75.26 9 5.1 No 60 0.64 No 0 0 No -23 0.61 No 32 51.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646306 + NM_133509 RAD51B 0 . . . 5.25 78.44 36 6.81 Yes 61 0.82 Yes 0 0 No -31 0.63 No 45 52.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68811847 + NM_133509 RAD51B 0 . . . 0.59 0 20 5 No 16 1.05 Yes 0 0 No -18 0.43 No 42 50.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68510542 + NM_133509 RAD51B 0 . . . 0.07 67.01 9 5.83 Yes 64 1.67 Yes 0 0 No -27 0.69 Yes 48 45.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89646992 + NM_000314 PTEN 0 . . . 4.45 74.88 25 6.71 Yes 12 0.41 No 0 0 No -29 0.54 No 45 58.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190728164 + NM_000534 PMS1 0 . . . 3.83 80.12 9 4.22 No 7 1.76 Yes 0 0 No -25 0.86 Yes 51 74.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68411266 + NM_133509 RAD51B 0 . . . 2.06 77.7 24 5.12 No 38 0.46 No 0 0 No -19 0.75 Yes 51 46.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59896696 - NM_032043 BRIP1 0 . . . 5.95 71.44 32 5.57 Yes 55 1.26 Yes 0 0 No -31 0.81 Yes 46 57.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47797707 + NM_000251 MSH2 0 . . . 3.21 71.75 20 5.48 No 30 -1.89 No 0 0 No -24 0.54 No 53 24.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108197683 + NM_000051 ATM 0 . . . 4.7 0 28 6.15 Yes 45 1.51 Yes 0 0 No -27 0.71 Yes 13 33.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59888321 - NM_032043 BRIP1 0 . . . 0.82 70.18 18 5.29 No 45 0.82 Yes 0 0 No -21 0.67 Yes 13 35.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68898575 + NM_133509 RAD51B 0 . . . 7.22 69.28 14 5.38 No 47 0.65 No 0 0 No -24 0.6 No 49 68.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94164222 - NM_005591 MRE11 0 . . . 0.7 81.3 19 4.9 No 7 0.07 No 0 0 No -19 0.71 Yes 48 76.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68501812 + NM_133509 RAD51B 0 . . . 6.6 83.32 15 5.29 No 19 1.73 Yes 0 0 No -29 0.39 No 48 81.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47634443 + NM_000251 MSH2 0 . . . 3.71 73.74 12 6.71 Yes 68 -3.2 No 0 0 No -42 0.56 No 48 73.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59896329 - NM_032043 BRIP1 0 . . . 3.5 79.36 24 4.79 No 58 1.13 Yes 0 0 No -21 0.77 Yes 55 41.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68295131 + NM_133509 RAD51B 0 . . . 2.06 61.18 44 5.28 No 73 0.75 No 0 0 No -30 0.69 Yes 49 34.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68635371 + NM_133509 RAD51B 0 . . . 1.06 72.4 17 4.8 No 9 1.13 Yes 0 0 No -56 0.48 No 49 87.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68469924 + NM_133509 RAD51B 0 . . . 1.11 74.03 25 5.57 Yes 53 0.89 Yes 0 0 No -24 0.93 Yes 39 82.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47710794 + NM_000251 MSH2 0 . . . 4.89 72.68 15 4.58 No 23 -3.67 No 0 0 No -34 0.52 No 36 83.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89697048 + NM_000314 PTEN 0 . . . 3.99 74 18 4.9 No 52 -5.12 No 0 0 No -24 0.6 No 50 31.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68661358 + NM_133509 RAD51B 0 . . . 4.3 72.52 15 4.59 No 44 1.65 Yes 0 0 No -18 0.37 No 46 50.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131959879 + NM_005732 RAD50 0 . . . 0.32 60.62 36 6.92 Yes 44 -3.8 No 0 0 No -35 0.85 Yes 33 79.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152347918 - NM_005431 XRCC2 0 . . . 0.74 70.42 22 5.1 No 76 0.93 Yes 0 0 No -59 0.74 Yes 49 31.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108092464 + NM_000051 ATM 0 . . . 7.8 75.92 17 5.27 No 16 0.57 No 0 0 No -25 0.87 Yes 42 66.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69038004 + NM_133509 RAD51B 0 . . . 0.73 58.19 26 5.25 No 24 0.98 Yes 0 0 No -25 0.86 Yes 34 85.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89690538 + NM_000314 PTEN 0 . . . 2.02 67.29 25 4.73 No 42 -3.56 No 0 0 No -19 0.36 No 53 93.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69072084 + NM_133509 RAD51B 0 . . . 1.81 77.39 28 5.2 No 32 0.65 No 0 0 No -27 0.36 No 26 80.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6011469 - NM_000535 PMS2 0 . . . 1.11 74.76 23 3.73 No 33 1.16 Yes 0 0 No -23 0.74 Yes 17 42.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32955860 + NM_000059 BRCA2 0 . . . 3.32 79.61 39 6.32 Yes 48 -2.77 No 0 0 No -38 0.78 Yes 52 44.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32970041 + NM_000059 BRCA2 0 . . . 3.84 76.43 22 5.23 No 44 1.24 Yes 0 0 No -21 0.67 Yes 38 52.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48023591 + NM_000179 MSH6 0 . . . 2.18 82.27 15 4.58 No 26 -3.74 No 0 0 No -23 0.66 No 44 79.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108228126 + NM_000051 ATM 0 . . . 0.28 0 34 4.49 No 49 -2.69 No 0 0 No -27 0.77 Yes 65 21.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47785305 + NM_000251 MSH2 0 . . . 4.65 78.72 42 7.52 Yes 32 0.53 No 0 0 No -26 0.36 No 39 76.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75506349 - NM_001040108 MLH3 0 . . . 0.67 77.18 30 4.98 No 30 -4.06 No 0 0 No -29 0.69 Yes 48 55.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68880676 + NM_133509 RAD51B 0 . . . 3.85 69.52 14 4.86 No 38 0.21 No 0 0 No -24 0.46 No 43 51.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105181765 + NM_021930 RINT1 0 . . . 2.28 85.02 15 4.89 No 64 0.71 No 0 0 No -19 0.44 No 53 59.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59843993 - NM_032043 BRIP1 0 . . . 0.48 0 24 6.89 Yes 23 1.1 Yes 0 0 No -23 0.84 Yes 42 58.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59932102 - NM_032043 BRIP1 0 . . . 4.2 0 31 5.32 No 5 1 Yes 0 0 No -55 0.32 No 53 79.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90964472 - NM_002485 NBN 0 . . . 0.87 64.72 42 9.32 Yes 25 1.01 Yes 0 0 No -41 0.56 No 19 84.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108216731 + NM_000051 ATM 0 . . . 1.24 0 14 5.38 No 56 0.52 No 0 0 No -27 0.57 No 42 88.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68889930 + NM_133509 RAD51B 0 . . . 7.79 84.9 26 5.99 Yes 53 1.02 Yes 0 0 No -26 0.74 Yes 48 47.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41199577 - NM_007294 BRCA1 0 . . . 1.04 65.19 23 5.09 No 12 0.31 No 0 0 No -22 0.83 Yes 46 55.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68500945 + NM_133509 RAD51B 0 . . . 0.77 0 17 5.41 No 45 1.69 Yes 0 0 No -24 0.88 Yes 59 62.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45794749 - NM_001048171 MUTYH 0 . . . 0.64 77.45 32 4.68 No 70 0.72 No 0 0 No -24 0.86 Yes 39 55.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68377388 + NM_133509 RAD51B 0 . . . 1.11 72.48 37 7.65 Yes 68 1.02 Yes 0 0 No -30 0.5 No 48 75.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90970375 - NM_002485 NBN 0 . . . 7.16 80.48 34 6.1 Yes 6 1.22 Yes 0 0 No -33 0.65 No 52 63.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41194368 - NM_007294 BRCA1 0 . . . 3.61 71.78 27 5.29 No 38 -3.61 No 0 0 No -26 0.82 Yes 42 57.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152342972 - NM_005431 XRCC2 0 . . . 3.41 82.47 24 5.48 No 69 -2 No 0 0 No -23 0.63 No 16 47.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131935582 + NM_005732 RAD50 0 . . . 2.98 60.97 43 6.48 Yes 50 0.53 No 0 0 No -25 0.34 No 43 28.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59866449 - NM_032043 BRIP1 0 . . . 1.59 0 30 6.63 Yes 19 1.24 Yes 0 0 No -29 0.96 Yes 39 87.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131932210 + NM_005732 RAD50 0 . . . 3.07 68.68 21 4.9 No 11 0.96 Yes 0 0 No -20 0.73 Yes 34 77.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68805812 + NM_133509 RAD51B 0 . . . 7.73 81.2 9 5.28 No 10 1.12 Yes 0 0 No -22 0.7 Yes 44 56.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32962351 + NM_000059 BRCA2 0 . . . 6.52 82.56 17 5.29 No 53 1.48 Yes 0 0 No -29 0.43 No 48 94.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68416776 + NM_133509 RAD51B 0 . . . 5.51 71.38 39 6.31 Yes 58 0.09 No 0 0 No -38 0.53 No 47 85.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68453249 + NM_133509 RAD51B 0 . . . 7.66 90.59 32 5.29 No 14 1.72 Yes 0 0 No -27 0.7 Yes 44 63.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190665842 + NM_000534 PMS1 0 . . . 2.51 87.39 16 6.25 Yes 45 1.54 Yes 0 0 No -21 0.28 No 50 77.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68344309 + NM_133509 RAD51B 0 . . . 3.53 79.73 15 5.99 Yes 39 -0.75 No 0 0 No -22 0.8 Yes 32 73.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32964766 + NM_000059 BRCA2 0 . . . 0.03 0 31 4.54 No 2 0.55 No 0 0 No -35 0.77 Yes 44 63.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33430852 - NM_002878 RAD51D 0 . . . 3.28 70.85 13 4.2 No 22 1.55 Yes 0 0 No -47 0.55 No 46 71.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68710723 + NM_133509 RAD51B 0 . . . 3.52 79.85 16 4.89 No 16 1.5 Yes 0 0 No -21 0.86 Yes 37 70.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47653739 + NM_000251 MSH2 0 . . . 3.97 75.83 29 5.39 No 73 1.02 Yes 0 0 No -28 0.36 No 37 70.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32902479 + NM_000059 BRCA2 0 . . . 8.18 87.44 19 4.86 No 15 0.89 Yes 0 0 No -18 0.27 No 43 96.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59913993 - NM_032043 BRIP1 0 . . . 9.24 91.11 22 5.29 No 59 1.44 Yes 0 0 No -21 0.92 Yes 44 55.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108239941 + NM_000051 ATM 0 . . . 2.79 68.24 43 6.35 Yes 76 0.01 No 0 0 No -21 0.49 No 51 35.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68321952 + NM_133509 RAD51B 0 . . . 3.34 71.45 31 6.08 Yes 52 -1.48 No 0 0 No -30 0.45 No 40 94.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32932292 + NM_000059 BRCA2 0 . . . 4.14 79.65 27 5.32 No 23 0.33 No 0 0 No -27 0.22 No 50 46.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47734937 + NM_000251 MSH2 0 . . . 7.59 77.14 32 5.9 Yes 44 0.57 No 0 0 No -31 0.87 Yes 47 68.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7575798 - NM_000546 TP53 0 . . . 0.63 0 18 5.21 No 33 0.99 Yes 0 0 No -23 0.73 Yes 25 58.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105192264 + NM_021930 RINT1 0 . . . 0.81 67.3 16 6.78 Yes 75 0.65 No 0 0 No -32 0.35 No 54 70.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68389300 + NM_133509 RAD51B 0 . . . 0.04 0 18 4.31 No 25 0.35 No 0 0 No -17 0.42 No 32 92.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131919249 + NM_005732 RAD50 0 . . . 8.49 70.91 20 5.82 Yes 15 0.47 No 0 0 No -19 0.79 Yes 43 81.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90990448 - NM_002485 NBN 0 . . . 0.53 61.38 19 6.86 Yes 56 0.02 No 0 0 No -18 0.47 No 61 28.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68410999 + NM_133509 RAD51B 0 . . . 6.09 80.28 37 7.29 Yes 16 1.01 Yes 0 0 No -28 0.9 Yes 42 85.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59849934 - NM_032043 BRIP1 0 . . . 3.42 70.85 18 5.59 Yes 31 0.46 No 0 0 No -24 0.53 No 40 80.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68415960 + NM_133509 RAD51B 0 . . . 1.24 86.89 21 5.2 No 53 1.37 Yes 0 0 No -21 0.72 Yes 47 53.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68638919 + NM_133509 RAD51B 0 . . . 2.86 66 15 4.58 No 29 1.34 Yes 0 0 No -36 0.52 No 35 78.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69051201 + NM_133509 RAD51B 0 . . . 6.53 75.21 61 7.87 Yes 6 2.24 Yes 0 0 No -28 0.86 Yes 52 77.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215656692 - NM_000465 BARD1 0 . . . 8.09 79.34 12 4.24 No 5 2.28 Yes 0 0 No -19 0.58 No 42 52.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215662314 - NM_000465 BARD1 0 . . . 4.13 84.69 18 4.69 No 75 -4.04 No 0 0 No -36 0.71 Yes 43 56.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68631271 + NM_133509 RAD51B 0 . . . 4.5 69.28 25 6.16 Yes 31 1.38 Yes 0 0 No -24 0.78 Yes 17 64.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21982979 - NM_000077 CDKN2A 0 . . . 3.21 71.32 13 4.36 No 57 -2.64 No 0 0 No -20 0.53 No 45 53.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68324804 + NM_133509 RAD51B 0 . . . 4.82 74.12 23 4.8 No 3 0.47 No 0 0 No -22 0.89 Yes 43 68.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75507126 - NM_001040108 MLH3 0 . . . 3.19 81.49 43 6.71 Yes 52 0.97 Yes 0 0 No -32 0.69 Yes 46 48.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215656224 - NM_000465 BARD1 0 . . . 1.82 64.63 16 5.48 No 20 0.2 No 0 0 No -23 0.82 Yes 38 53.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48027940 + NM_000179 MSH6 0 . . . 0.22 62.31 22 5 No 0 0.03 No 0 0 No -21 0.75 Yes 41 29.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29084960 - NM_001005735 CHEK2 0 . . . 0.07 0 15 4.58 No 52 0.76 No 0 0 No -18 0.58 No 45 59.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33432057 - NM_002878 RAD51D 0 . . . 0.39 62.05 53 7.32 Yes 15 0.06 No 0 0 No -35 0.96 Yes 43 54.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69139772 + NM_133509 RAD51B 0 . . . 2.29 70.5 23 4.34 No 6 0.71 No 0 0 No -22 0.77 Yes 42 81.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68964632 + NM_133509 RAD51B 0 . . . 3.84 78.83 18 3.44 No 5 0.61 No 0 0 No -20 0.47 No 44 92.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59859089 - NM_032043 BRIP1 0 . . . 0.42 74.73 27 6.08 Yes 33 1.16 Yes 0 0 No -32 0.21 No 25 45.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215624260 - NM_000465 BARD1 0 . . . 0.27 54.53 13 6.27 Yes 17 1.34 Yes 0 0 No -22 0.36 No 41 45.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29123362 - NM_001005735 CHEK2 0 . . . 0.59 79.81 28 5.29 No 13 -1.81 No 0 0 No -27 0.65 No 47 27.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69006626 + NM_133509 RAD51B 0 . . . 8.22 88.24 45 4.83 No 7 1.91 Yes 0 0 No -28 0.61 No 37 64.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131949473 + NM_005732 RAD50 0 . . . 1.96 80.12 28 5.38 No 7 1.16 Yes 0 0 No -27 0.68 Yes 51 87.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41245672 - NM_007294 BRCA1 0 . . . 2.13 61.5 20 5.34 No 71 -3.42 No 0 0 No -26 0.45 No 55 53.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68284638 + NM_133509 RAD51B 0 . . . 10.24 87.51 22 5.19 No 14 1.09 Yes 0 0 No -31 0.68 Yes 44 96.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190678720 + NM_000534 PMS1 0 . . . 4.11 75.36 33 6.43 Yes 73 -5.66 No 0 0 No -32 0.58 No 49 39.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68448833 + NM_133509 RAD51B 0 . . . 5.74 85.02 26 5.23 No 69 0.03 No 0 0 No -25 0.79 Yes 45 62.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89681865 + NM_000314 PTEN 0 . . . 4.04 68.73 32 5.79 Yes -2 0.26 No 0 0 No -31 0.61 No 44 72.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68532356 + NM_133509 RAD51B 0 . . . 3.37 73.28 18 4.42 No NA NA NA 0 0 No -21 0.84 Yes 40 71.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59778393 - NM_032043 BRIP1 0 . . . 7.42 70.2 19 5.09 No 9 0.99 Yes 0 0 No -27 0.38 No 49 28.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68583512 + NM_133509 RAD51B 0 . . . 3.67 80.33 19 7.07 Yes 65 0.32 No 0 0 No -18 0.7 Yes 43 78.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75491654 - NM_001040108 MLH3 0 . . . 9.41 87.67 48 7.1 Yes 41 -1.23 No 0 0 No -31 0.65 No 46 79.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29137397 - NM_001005735 CHEK2 0 . . . 1.85 77.21 76 7.06 Yes 45 -5.02 No 0 0 No -28 0.44 No 52 50.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33442431 - NM_002878 RAD51D 0 . . . 5.11 90.07 39 6.57 Yes 63 0.56 No 0 0 No -35 0.55 No 49 90.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23612567 - NM_024675 PALB2 0 . . . 0.83 69.9 23 5.41 No 9 0.75 No 0 0 No -22 0.76 Yes 61 36.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108143749 + NM_000051 ATM 0 . . . 6.18 77.85 31 5.12 No 11 0.77 No 0 0 No -31 0.41 No 40 77.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215670537 - NM_000465 BARD1 0 . . . 1.45 73.47 19 4.81 No 22 1.3 Yes 0 0 No -25 0.79 Yes 36 84.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29131072 - NM_001005735 CHEK2 0 . . . 2.1 74.29 19 4.58 No 47 0.72 No 0 0 No -18 0.9 Yes 48 45.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47736953 + NM_000251 MSH2 0 . . . 3.33 70.12 34 5.99 Yes 72 -3.54 No 0 0 No -19 0.53 No 49 47.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891808 + NM_133509 RAD51B 0 . . . 3.43 73.44 16 4.63 No 66 0.87 Yes 0 0 No -15 0.46 No 42 71.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108109816 + NM_000051 ATM 0 . . . 3.42 77.89 27 5.2 No -2 0.85 Yes 0 0 No -26 0.61 No 40 61.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32909888 + NM_000059 BRCA2 0 . . . 3.05 51.64 17 4.8 No 12 1.23 Yes 0 0 No -28 0.44 No 46 46.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131949284 + NM_005732 RAD50 0 . . . 5.32 67.29 22 5.2 No 10 1.23 Yes 0 0 No -20 0.35 No 48 64.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215598759 - NM_000465 BARD1 0 . . . 2.12 71.68 13 3.76 No 42 -2.55 No 0 0 No -17 0.5 No 41 41.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68792334 + NM_004360 CDH1 0 . . . 4.53 76.1 45 8.92 Yes 57 -3.29 No 0 0 No -36 0.73 Yes 50 69.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68759993 + NM_133509 RAD51B 0 . . . 3.08 81.93 22 4.89 No 63 0.47 No 0 0 No -27 0.26 No 41 31.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68779671 + NM_004360 CDH1 0 . . . 7.36 87.69 73 8.49 Yes 10 0.08 No 0 0 No -27 0.41 No 48 86.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131943462 + NM_005732 RAD50 0 . . . 2.95 79.61 18 5.25 No 0 0.34 No 0 0 No -22 0.43 No 51 41.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23617094 - NM_024675 PALB2 0 . . . 4.75 66 18 4.89 No 27 0.18 No 0 0 No -21 0.75 Yes 48 72.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215623180 - NM_000465 BARD1 0 . . . 1.37 77.24 24 4.8 No -3 0.32 No 0 0 No -30 0.67 Yes 61 33.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90982936 - NM_002485 NBN 0 . . . 0.16 68.63 13 5.09 No 65 -5.77 No 0 0 No -29 0.39 No 56 24.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68456601 + NM_133509 RAD51B 0 . . . 1.79 88.91 34 5.37 No 29 0.74 No 0 0 No -24 0.64 No 51 60.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29130410 - NM_001005735 CHEK2 0 . . . 4.26 83.7 21 5.2 No 32 0.05 No 0 0 No -20 0.5 No 26 66.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152368690 - NM_005431 XRCC2 0 . . . 6.61 79.05 28 5.38 No 29 1.3 Yes 0 0 No -27 0.66 No 45 71.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68800337 + NM_133509 RAD51B 0 . . . 5.81 75.38 18 5.54 No 64 0.1 No 0 0 No -18 0.55 No 47 59.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89660357 + NM_000314 PTEN 0 . . . 2.11 0 30 7.06 Yes 60 0.53 No 0 0 No -29 0.86 Yes 46 90.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6040595 - NM_000535 PMS2 0 . . . 5.11 84 26 4.96 No 38 1.58 Yes 0 0 No -25 0.87 Yes 20 91.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23654280 - NM_024675 PALB2 0 . . . 7.34 84.16 12 3.36 No 1 1.78 Yes 0 0 No -37 0.49 No 46 91.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68294157 + NM_133509 RAD51B 0 . . . 5.83 87.65 17 6.93 Yes 15 0.62 No 0 0 No -29 0.47 No 43 79.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56789461 + NM_058216 RAD51C 0 . . . 0.03 72.99 25 5.29 No 64 1.4 Yes 0 0 No -24 0.51 No 54 51.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21981290 - NM_000077 CDKN2A 0 . . . 0.69 72.09 24 5.1 No 49 1.01 Yes 0 0 No -23 0.86 Yes 50 68.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59931211 - NM_032043 BRIP1 0 . . . 5.92 81.12 21 5.05 No 7 0.91 Yes 0 0 No -20 0.46 No 51 54.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21985661 - NM_000077 CDKN2A 0 . . . 3.59 75.57 27 3.64 No 5 0.75 No 0 0 No -21 0.9 Yes 40 89.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108208289 + NM_000051 ATM 0 . . . 6.55 72.18 17 7.08 Yes 53 1.47 Yes 0 0 No -32 0.34 No 47 68.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40992715 + NM_001164269 RAD51 0 . . . 3.4 0 18 5.36 No 32 -2.18 No 0 0 No -17 0.35 No 55 55.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56787344 + NM_058216 RAD51C 0 . . . 1.89 66.24 45 6.61 Yes 58 1.11 Yes 0 0 No -34 0.4 No 50 58.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131978283 + NM_005732 RAD50 0 . . . 0.76 0 23 6.34 Yes 18 1.33 Yes 0 0 No -22 0.74 Yes 40 93.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131936991 + NM_005732 RAD50 0 . . . 0.25 70.99 13 4.79 No 61 0.94 Yes 0 0 No -27 0.6 No 44 25.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68752077 + NM_133509 RAD51B 0 . . . 0.28 71.76 17 5.03 No 0 0.99 Yes 0 0 No -32 0.92 Yes 51 48.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68929990 + NM_133509 RAD51B 0 . . . 2.79 67.38 30 5.05 No 65 -5.99 No 0 0 No -29 0.79 Yes 46 30.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68826944 + NM_133509 RAD51B 0 . . . 1.76 0 18 5.34 No 6 1.16 Yes 0 0 No -29 0.61 No 52 35.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47652797 + NM_000251 MSH2 0 . . . 2.96 80.11 34 7.97 Yes -1 0.75 No 0 0 No -33 0.51 No 48 62.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32895581 + NM_000059 BRCA2 0 . . . 0.83 77.33 27 5.29 No 69 -5.31 No 0 0 No -27 0.42 No 47 89.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84390387 - NM_139076 FAM175A 0 . . . 7.27 83.63 34 4.25 No 52 0.51 No 0 0 No -24 0.32 No 28 68.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68431321 + NM_133509 RAD51B 0 . . . 0.63 85.67 20 5 No 46 1.11 Yes 0 0 No -19 0.46 No 12 58.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69008350 + NM_133509 RAD51B 0 . . . 3.27 73.56 33 5.69 Yes 23 0.95 Yes 0 0 No -28 0.68 Yes 28 89.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84403480 - NM_139076 FAM175A 0 . . . 0.88 71.15 13 4.24 No 72 1.1 Yes 0 0 No -20 0.36 No 53 62.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23651959 - NM_024675 PALB2 0 . . . 7.08 80.67 14 6.04 Yes 66 0.68 No 0 0 No -24 0.53 No 40 93.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94170438 - NM_005591 MRE11 0 . . . 1.04 0 28 5.01 No 0 0.77 Yes 32 0.52 Yes -25 0.55 No 47 59.59 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 68996578 + NM_133509 RAD51B 0 . . . 0.41 65.44 25 5.57 Yes 69 -5.72 No 0 0 No -25 0.69 Yes 36 54.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68986518 + NM_133509 RAD51B 0 . . . 0.83 0 14 3.87 No 28 -1.61 No 0 0 No -40 0.67 Yes 42 63.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68838405 + NM_004360 CDH1 0 . . . 0.1 62.3 28 5.74 Yes -1 0.2 No 0 0 No -27 0.91 Yes 56 39.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68313843 + NM_133509 RAD51B 0 . . . 7.71 91.13 20 5.1 No 76 1.59 Yes 0 0 No -24 0.24 No 52 73.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108165595 + NM_000051 ATM 0 . . . 5.73 80.66 15 5.29 No 7 1.21 Yes 0 0 No -52 0.75 Yes 46 70.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68730763 + NM_133509 RAD51B 0 . . . 3.31 74.86 26 5.07 No 66 2.15 Yes 0 0 No -25 0.66 No 48 75.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105185607 + NM_021930 RINT1 0 . . . 5.35 75.08 25 7.41 Yes 76 0.93 Yes 0 0 No -22 0.91 Yes 40 76.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47799629 + NM_000251 MSH2 0 . . . 1.74 74.75 16 5.73 Yes 76 -2.51 No 0 0 No -30 0.58 No 38 48.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108114091 + NM_000051 ATM 0 . . . 0.95 70.87 26 5.66 Yes 56 0.1 No 0 0 No -25 0.75 Yes 54 85.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32897942 + NM_000059 BRCA2 0 . . . 0.45 67.3 38 6.99 Yes 61 -2.53 No 0 0 No -23 0.9 Yes 49 74.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131950650 + NM_005732 RAD50 0 . . . 2.26 64.48 21 3.79 No 36 0.77 No 0 0 No -20 0.78 Yes 35 67.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68593888 + NM_133509 RAD51B 0 . . . 0.62 62.99 18 4.28 No 33 0.67 No 0 0 No -18 0.46 No 25 60.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190702533 + NM_000534 PMS1 0 . . . 2.55 71.41 33 6.24 Yes -1 0.56 No 0 0 No -32 0.74 Yes 63 32.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69057655 + NM_133509 RAD51B 0 . . . 1.24 0 18 4.79 No 41 1.09 Yes 0 0 No -16 0.37 No 54 38.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89669506 + NM_000314 PTEN 0 . . . 4.63 78.4 13 5.79 Yes 17 0.17 No 0 0 No -28 0.86 Yes 51 65.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56777056 + NM_058216 RAD51C 0 . . . 1.84 78.12 22 6.44 Yes -1 -1.56 No 0 0 No -26 0.56 No 15 49.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89702881 + NM_000314 PTEN 0 . . . 1.14 66.8 26 3.57 No 38 1.59 Yes 0 0 No -29 0.77 Yes 24 49.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59860407 - NM_032043 BRIP1 0 . . . 1.44 57.95 18 4.69 No 22 0.84 Yes 0 0 No -21 0.88 Yes 36 48.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68497427 + NM_133509 RAD51B 0 . . . 2.41 80.22 18 4.69 No 18 0.31 No 0 0 No -17 0.55 No 51 53.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37078275 + NM_000249 MLH1 0 . . . 4.8 69.29 35 7.16 Yes 61 0.39 No 0 0 No -21 0.62 No 44 68.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68314451 + NM_133509 RAD51B 0 . . . 5.55 89.95 32 7.93 Yes 43 1.36 Yes 0 0 No -31 0.88 Yes 50 71.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215613414 - NM_000465 BARD1 0 . . . 12.15 84.23 15 4.13 No 36 1.32 Yes 0 0 No -21 0.28 No 48 74.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68624290 + NM_133509 RAD51B 0 . . . 3.18 81.12 27 4.37 No 31 0.5 No 0 0 No -26 0.75 Yes 27 66.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1228135 + NM_000455 STK11 0 . . . 0.04 76.47 10 4 No 54 -5.73 No 0 0 No -39 0.49 No 54 45.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68485607 + NM_133509 RAD51B 0 . . . 6.41 83.57 39 5.76 Yes 5 1.43 Yes 0 0 No -22 0.58 No 45 73.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68686941 + NM_133509 RAD51B 0 . . . 1.32 73.2 23 5.91 Yes 63 -6.25 No 0 0 No -25 0.78 Yes 49 69.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68834387 + NM_004360 CDH1 0 . . . 0.47 66.76 36 5.92 Yes 15 0.68 No 0 0 No -25 0.51 No 43 44.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47803238 + NM_000251 MSH2 0 . . . 0.05 70.73 14 4.47 No 9 0.59 No 0 0 No -43 0.2 No 49 63.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68767254 + NM_133509 RAD51B 0 . . . 0.04 61.3 25 6.48 Yes 6 -1.51 No 0 0 No -24 0.92 Yes 38 71.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190689510 + NM_000534 PMS1 0 . . . 3.05 83.26 42 6.88 Yes 5 0.38 No 0 0 No -41 0.33 No 47 97.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37046593 + NM_000249 MLH1 0 . . . 4.41 70.07 24 3.31 No 48 -2.72 No 0 0 No -23 0.63 No 51 57.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32954252 + NM_000059 BRCA2 0 . . . 0.79 66.19 27 5.38 No 18 0.33 No 0 0 No -22 0.52 No 40 79.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215618808 - NM_000465 BARD1 0 . . . 0.09 61.63 29 8.14 Yes 71 0.4 No 0 0 No -28 0.66 No 52 59.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68802680 + NM_004360 CDH1 0 . . . 5.34 72.52 24 6.47 Yes 42 0.27 No 0 0 No -23 0.55 No 35 52.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190718700 + NM_000534 PMS1 0 . . . 2.62 68.49 22 5.29 No 64 0.4 No 0 0 No -21 0.42 No 37 51.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32968042 + NM_000059 BRCA2 0 . . . 10.42 87.58 23 7.6 Yes 9 0.51 No 0 0 No -22 0.45 No 44 94.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68469498 + NM_133509 RAD51B 0 . . . 2.06 70.18 21 5.09 No 74 0.29 No 0 0 No -20 0.86 Yes 51 58.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47645427 + NM_000251 MSH2 0 . . . 2.61 59.06 19 3.71 No 34 0.31 No 0 0 No -18 0.77 Yes 48 40.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68793166 + NM_133509 RAD51B 0 . . . 1.82 73.55 22 5.06 No 17 1.03 Yes 0 0 No -21 0.91 Yes 41 96.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47631006 + NM_000251 MSH2 0 . . . 2.35 71.88 40 6.4 Yes 29 0.61 No 0 0 No -37 0.38 No 22 70.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108129903 + NM_000051 ATM 0 . . . 2.82 64.95 46 7.87 Yes 49 0.76 No 0 0 No -45 0.84 Yes 46 31.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89691667 + NM_000314 PTEN 0 . . . 1.22 0 22 5 No 5 -2.11 No 0 0 No -47 0.39 No 32 49.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207203 - NM_007294 BRCA1 0 . . . 7.07 90.05 15 4.14 No 0 1.77 Yes 0 0 No -27 0.33 No 45 96.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52440237 - NM_004656 BAP1 0 . . . 5.13 76.91 18 4.8 No 53 -1.52 No 0 0 No -17 0.72 Yes 36 73.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152345246 - NM_005431 XRCC2 0 . . . 2.41 68.34 33 5.74 Yes 23 1.56 Yes 0 0 No -26 0.42 No 45 63.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68742697 + NM_133509 RAD51B 0 . . . 0.97 76.47 28 5.77 Yes 50 -1.12 No 0 0 No -27 0.65 No 31 45.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69088612 + NM_133509 RAD51B 0 . . . 0.5 81.6 24 4.82 No 62 -3.74 No 0 0 No -23 0.74 Yes 48 49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75508175 - NM_001040108 MLH3 0 . . . 7.7 90.26 24 6.48 Yes 3 1.46 Yes 0 0 No -23 0.79 Yes 50 94.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68543988 + NM_133509 RAD51B 0 . . . 3.28 73.59 35 6.4 Yes 71 0.09 No 0 0 No -30 0.8 Yes 39 85.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89643577 + NM_000314 PTEN 0 . . . 0.21 77.66 15 4.58 No 71 0.26 No 0 0 No -57 0.58 No 46 76.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68808357 + NM_133509 RAD51B 0 . . . 3.37 86.76 22 6.46 Yes 37 1.39 Yes 0 0 No -21 0.87 Yes 26 75.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68856077 + NM_004360 CDH1 0 . . . 5.08 82.95 18 5.74 Yes 27 1.06 Yes 0 0 No -26 0.78 Yes 35 58.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37039272 + NM_000249 MLH1 0 . . . 0.44 58.44 56 7.38 Yes 64 -3.17 No 0 0 No -24 0.79 Yes 51 58.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68594123 + NM_133509 RAD51B 0 . . . 2.79 67.89 13 4.87 No 44 0.06 No 0 0 No -42 0.73 Yes 26 82.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68865178 + NM_004360 CDH1 0 . . . 2.9 85.51 28 4.76 No 4 0.36 No 0 0 No -27 0.79 Yes 28 58.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59908204 - NM_032043 BRIP1 0 . . . 2.29 73.22 47 8.86 Yes 25 0.98 Yes 0 0 No -46 0.54 No 43 63.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7576089 - NM_000546 TP53 0 . . . 5.29 84.95 21 4.58 No 18 0.3 No 0 0 No -29 0.4 No 40 58.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37079343 + NM_000249 MLH1 0 . . . 1.67 77.77 22 5.98 Yes 60 -2.32 No 0 0 No -21 0.52 No 14 35.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47799334 + NM_000251 MSH2 0 . . . 3.06 65.09 34 6.85 Yes -1 0.59 No 0 0 No -33 0.58 No 43 27.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37087221 + NM_000249 MLH1 0 . . . 2.3 84.41 30 7.72 Yes 72 2.13 Yes 0 0 No -29 0.74 Yes 35 94.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59915239 - NM_032043 BRIP1 0 . . . 5.62 76.1 38 7.14 Yes 2 2.05 Yes 0 0 No -37 0.69 Yes 47 54.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29102360 - NM_001005735 CHEK2 0 . . . 6.06 80.06 15 5.74 Yes 35 1.1 Yes 0 0 No -46 0.43 No 36 75.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190692531 + NM_000534 PMS1 0 . . . 0.12 0 30 7.07 Yes 29 0.24 No 0 0 No -29 0.72 Yes 52 79.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41231779 - NM_007294 BRCA1 0 . . . 5.2 72.6 31 5.35 No 61 1.35 Yes 0 0 No -27 0.69 Yes 44 67.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59838900 - NM_032043 BRIP1 0 . . . 4.61 75.64 19 4.23 No 45 1.17 Yes 0 0 No -57 0.5 No 48 80.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68567109 + NM_133509 RAD51B 0 . . . 3.11 82.03 16 4.11 No 2 1.43 Yes 0 0 No -27 0.78 Yes 19 85.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47649544 + NM_000251 MSH2 0 . . . 2.66 77.87 29 5.35 No 75 -7.17 No 0 0 No -28 0.8 Yes 50 35.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68750071 + NM_133509 RAD51B 0 . . . 1.12 78.55 25 4.74 No 38 -3.92 No 0 0 No -24 0.74 Yes 47 81.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41238575 - NM_007294 BRCA1 0 . . . 2.98 73.69 47 5.1 No 50 1.47 Yes 0 0 No -46 0.39 No 46 91.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23644026 - NM_024675 PALB2 0 . . . 1.27 68.94 19 6.17 Yes 30 -2.34 No 0 0 No -27 0.73 Yes 45 83.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68715888 + NM_133509 RAD51B 0 . . . 3.02 0 22 6.24 Yes 1 0.8 Yes 0 0 No -21 0.97 Yes 47 79.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69115741 + NM_133509 RAD51B 0 . . . 2.4 69.01 26 5.31 No 75 -6.05 No 0 0 No -25 0.55 No 46 40.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131901617 + NM_005732 RAD50 0 . . . 1.02 78.24 11 5.48 No 53 0.31 No 0 0 No -27 0.38 No 51 62.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68307302 + NM_133509 RAD51B 0 . . . 1.31 66.64 24 4.81 No 23 0.81 Yes 0 0 No -29 0.61 No 35 82.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23621103 - NM_024675 PALB2 0 . . . 0.09 74.68 58 7.2 Yes 59 0.48 No 0 0 No -18 0.43 No 54 88.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215622619 - NM_000465 BARD1 0 . . . 2.85 75.53 32 6.01 Yes 60 2.17 Yes 0 0 No -31 0.61 No 51 75.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69124021 + NM_133509 RAD51B 0 . . . 2.27 72.53 21 5.66 Yes 59 -3.74 No 0 0 No -20 0.82 Yes 54 41.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59854327 - NM_032043 BRIP1 0 . . . 0.81 77.91 22 5 No 59 0.55 No 0 0 No -21 0.71 Yes 44 63.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105187447 + NM_021930 RINT1 0 . . . 4.63 78.76 19 4.9 No 47 0.29 No 0 0 No -23 0.64 No 56 46.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56775308 + NM_058216 RAD51C 0 . . . 6.21 82.31 26 6.14 Yes 4 0.68 No 0 0 No -25 0.79 Yes 40 88.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47632124 + NM_000251 MSH2 0 . . . 3.23 80.49 32 5.09 No 37 1.55 Yes 0 0 No -31 0.86 Yes 31 70.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48008790 + NM_000179 MSH6 0 . . . 3.46 79.91 39 3.57 No 76 1.01 Yes 0 0 No -34 0.54 No 49 80.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68393882 + NM_133509 RAD51B 0 . . . 2.01 62.96 26 5.66 Yes 28 0.33 No 0 0 No -25 0.85 Yes 40 86.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190736460 + NM_000534 PMS1 0 . . . 2.44 75.65 13 4.81 No 50 0.53 No 0 0 No -30 0.77 Yes 48 66.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68663115 + NM_133509 RAD51B 0 . . . 1.18 0 20 5.1 No 59 0.13 No 0 0 No -24 0.61 No 34 76.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215593642 - NM_000465 BARD1 0 . . . 5.57 85.62 17 6.7 Yes 3 0.51 No 0 0 No -43 0.3 No 51 57.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190675572 + NM_000534 PMS1 0 . . . 6.4 83.63 17 4.8 No 47 0.8 Yes 0 0 No -48 0.41 No 48 54.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190708591 + NM_000534 PMS1 0 . . . 1.41 62.22 44 6.83 Yes 22 0.58 No 0 0 No -25 0.64 No 50 70.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41197450 - NM_007294 BRCA1 0 . . . 0.33 70.19 22 4.69 No 5 0.86 Yes 0 0 No -21 0.93 Yes 47 59.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108151768 + NM_000051 ATM 0 . . . 1.81 62.85 21 5.92 Yes 48 0.35 No 0 0 No -20 0.63 No 36 39.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131919857 + NM_005732 RAD50 0 . . . 7.62 82.12 25 5.74 Yes 74 0.85 Yes 0 0 No -28 0.74 Yes 38 55.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21986758 - NM_000077 CDKN2A 0 . . . 4.55 73.94 47 7.94 Yes 6 0.71 No 0 0 No -26 0.6 No 47 56.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68884458 + NM_133509 RAD51B 0 . . . 1.3 74.13 34 5.83 Yes 16 0.68 No 0 0 No -24 0.35 No 42 85.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68783520 + NM_133509 RAD51B 0 . . . 2.88 65.13 22 4.58 No 72 0.41 No 0 0 No -44 0.82 Yes 45 40.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68900834 + NM_133509 RAD51B 0 . . . 3.37 90.47 24 4.95 No 17 1.19 Yes 0 0 No -29 0.5 No 41 67.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215601179 - NM_000465 BARD1 0 . . . 4.76 70.93 30 6 Yes 19 0.59 No 0 0 No -32 0.57 No 39 91.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69013925 + NM_133509 RAD51B 0 . . . 6.3 81.47 12 5.29 No 68 0.97 Yes 0 0 No -50 0.76 Yes 42 77.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6018633 - NM_000535 PMS2 0 . . . 6.36 78.72 55 5.87 Yes 33 1.2 Yes 0 0 No -39 0.61 No 42 38.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75479900 - NM_001040108 MLH3 0 . . . 5.8 92.42 21 5.1 No 70 -4.28 No 0 0 No -20 0.54 No 40 53.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75517623 - NM_001040108 MLH3 0 . . . 7.78 84.3 36 5.57 Yes 68 -4.34 No 0 0 No -25 0.74 Yes 47 50.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40986752 + NM_001164269 RAD51 0 . . . 0.15 0 26 3.96 No 66 0.68 No 0 0 No -26 0.71 Yes 33 75.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23643080 - NM_024675 PALB2 0 . . . 0.83 74.14 35 5.82 Yes 38 0.79 Yes 0 0 No -34 0.73 Yes 46 62.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190669508 + NM_000534 PMS1 0 . . . 2.03 77.19 24 5.91 Yes 32 0.24 No 0 0 No -23 0.93 Yes 40 43.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68502691 + NM_133509 RAD51B 0 . . . 1.79 74.06 28 5.83 Yes 67 -4.54 No 0 0 No -27 0.94 Yes 50 68.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37043759 + NM_000249 MLH1 0 . . . 7.51 76.71 15 3.98 No 68 1.53 Yes 0 0 No -47 0.35 No 44 54.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47713533 + NM_000251 MSH2 0 . . . 2.14 69.82 27 5.57 Yes 0 0.75 No 0 0 No -26 0.68 Yes 41 54.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68446739 + NM_133509 RAD51B 0 . . . 2.34 72.1 18 4.09 No 27 1 Yes 0 0 No -40 0.91 Yes 44 78.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68382404 + NM_133509 RAD51B 0 . . . 1.95 73.14 30 5.83 Yes 19 -2.45 No 0 0 No -29 0.92 Yes 52 42.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45801479 - NM_001048171 MUTYH 0 . . . 2.84 0 15 6.46 Yes 56 -1.22 No 0 0 No -19 0.77 Yes 25 61.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68565863 + NM_133509 RAD51B 0 . . . 8.42 88.85 15 5.38 No 17 1.47 Yes 0 0 No -27 0.5 No 41 95.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68448698 + NM_133509 RAD51B 0 . . . 3.75 81.77 42 5.15 No 33 -1.06 No 0 0 No -32 0.84 Yes 44 52.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68361567 + NM_133509 RAD51B 0 . . . 1.22 63.05 13 5.72 Yes 71 1 Yes 0 0 No -22 0.47 No 20 53.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90990731 - NM_002485 NBN 0 . . . 3.57 65.14 21 5.2 No 40 1.5 Yes 0 0 No -27 0.27 No 41 61.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68899814 + NM_133509 RAD51B 0 . . . 1.14 0 26 3.86 No 44 0.6 No 0 0 No -20 0.66 No 41 74.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68903329 + NM_133509 RAD51B 0 . . . 2.91 87.05 32 5.92 Yes 11 0.19 No 0 0 No -31 0.77 Yes 48 60.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108140689 + NM_000051 ATM 0 . . . 0.07 0 22 4.73 No 43 1.18 Yes 0 0 No -22 0.44 No 51 62.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59825401 - NM_032043 BRIP1 0 . . . 5.97 71.75 22 5.37 No 67 1.8 Yes 0 0 No -21 0.83 Yes 17 79.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59892007 - NM_032043 BRIP1 0 . . . 1.11 73.84 25 6.35 Yes 38 -0.81 No 0 0 No -25 0.62 No 45 84.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75504599 - NM_001040108 MLH3 0 . . . 2.28 75.15 30 6.32 Yes 14 -2.38 No 0 0 No -29 0.64 No 50 55.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89704267 + NM_000314 PTEN 0 . . . 2.7 73.15 34 6.24 Yes 73 -6.85 No 0 0 No -33 0.7 Yes 40 47.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68824127 + NM_133509 RAD51B 0 . . . 0.05 0 22 4.33 No 71 1.58 Yes 0 0 No -21 0.79 Yes 60 25.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108235857 + NM_000051 ATM 0 . . . 2.83 65.19 34 6.57 Yes 24 0.41 No 0 0 No -36 0.74 Yes 46 83.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131955220 + NM_005732 RAD50 0 . . . 3.05 68.34 32 5.41 No 18 0.72 No 0 0 No -31 0.57 No 40 91.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69012877 + NM_133509 RAD51B 0 . . . 1.02 0 21 5.19 No 9 0.35 No 0 0 No -20 0.34 No 41 47.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104178577 - NM_001100119 XRCC3 0 . . . 0.38 0 51 9.52 Yes 48 -1.56 No 0 0 No -50 0.62 No 57 49.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29135386 - NM_001005735 CHEK2 0 . . . 3.52 65.81 28 5.29 No 69 1.63 Yes 0 0 No -21 0.27 No 43 36.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190687676 + NM_000534 PMS1 0 . . . 1.27 63.84 20 4.9 No 62 1.02 Yes 0 0 No -19 0.81 Yes 22 43.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89650573 + NM_000314 PTEN 0 . . . 5.09 76.29 26 5.38 No 59 0.95 Yes 0 0 No -26 0.57 No 42 38.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69042442 + NM_133509 RAD51B 0 . . . 2.53 72.71 49 8.08 Yes 47 2.34 Yes 0 0 No -48 0.48 No 51 55.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68417444 + NM_133509 RAD51B 0 . . . 6.68 78.77 17 4.68 No 34 1.54 Yes 0 0 No -44 0.7 Yes 49 90.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108154966 + NM_000051 ATM 0 . . . 3.82 73.91 39 7.2 Yes 30 1.1 Yes 0 0 No -38 0.61 No 28 74.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94169690 - NM_005591 MRE11 0 . . . 6.9 79.9 13 5.5 No 24 0.29 No 0 0 No -29 0.77 Yes 47 74.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59879037 - NM_032043 BRIP1 0 . . . 0.74 68.97 27 5.2 No 33 -1.86 No 0 0 No -26 0.93 Yes 41 75.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90973634 - NM_002485 NBN 0 . . . 3.11 67.55 12 3.96 No 41 0.59 No 0 0 No -19 0.73 Yes 37 78.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69135986 + NM_133509 RAD51B 0 . . . 0.42 72.66 28 5.39 No 48 0.89 Yes 0 0 No -42 0.65 No 59 51.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59764148 - NM_032043 BRIP1 0 . . . 4.75 89.04 27 4.55 No 59 0.89 Yes 0 0 No -26 0.76 Yes 44 67.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47736826 + NM_000251 MSH2 0 . . . 2.92 69.68 35 6.07 Yes 63 0.28 No 0 0 No -34 0.74 Yes 51 37.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68596252 + NM_133509 RAD51B 0 . . . 3.3 70.06 24 7.93 Yes 35 0.13 No 0 0 No -23 0.83 Yes 53 19.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68830046 + NM_133509 RAD51B 0 . . . 1.32 65.22 70 5.81 Yes 64 0.15 No 0 0 No -24 0.6 No 48 65.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75491824 - NM_001040108 MLH3 0 . . . 3.75 83.14 9 4.8 No 13 0.05 No 0 0 No -60 0.32 No 45 87.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37041265 + NM_000249 MLH1 0 . . . 11.48 83.87 17 4.8 No 72 1.42 Yes 0 0 No -16 0.25 No 44 39.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41243309 - NM_007294 BRCA1 0 . . . 6.61 80.78 31 5.2 No 49 -2.35 No 0 0 No -30 0.89 Yes 45 84.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69071976 + NM_133509 RAD51B 0 . . . 3.8 68.94 18 4.69 No 2 0.08 No 0 0 No -53 0.72 Yes 51 85.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41245208 - NM_007294 BRCA1 0 . . . 2.05 78.8 16 4.29 No 73 -3.86 No 0 0 No -25 0.24 No 39 85.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104175505 - NM_001100119 XRCC3 0 . . . 6.75 75.63 9 4.9 No 2 2.07 Yes 0 0 No -20 0.66 No 28 82.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37048971 + NM_000249 MLH1 0 . . . 7.57 82.78 32 5.26 No 46 1.72 Yes 0 0 No -26 0.28 No 42 53.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68298273 + NM_133509 RAD51B 0 . . . 2.69 81.8 21 5 No 28 0.93 Yes 0 0 No -20 0.87 Yes 50 88.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69016153 + NM_133509 RAD51B 0 . . . 3.97 84.41 19 4.81 No 66 0.89 Yes 0 0 No -50 0.54 No 38 80.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68799823 + NM_004360 CDH1 0 . . . 4.14 67.38 27 5.29 No 70 0.75 No 0 0 No -24 0.71 Yes 54 69.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152365833 - NM_005431 XRCC2 0 . . . 2.99 59.64 51 7.82 Yes 2 0.28 No 0 0 No -43 0.42 No 43 42.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94219635 - NM_005591 MRE11 0 . . . 0.38 0 14 5.62 Yes 24 0.41 No 0 0 No -20 0.37 No 38 37.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68296547 + NM_133509 RAD51B 0 . . . 3.9 71.14 30 6.93 Yes 30 -3.22 No 0 0 No -29 0.89 Yes 50 44.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94208942 - NM_005591 MRE11 0 . . . 7.87 82.83 15 4.36 No 19 0.94 Yes 0 0 No -39 0.48 No 47 52.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68753055 + NM_133509 RAD51B 0 . . . 3.46 73.43 26 5.29 No 27 0.95 Yes 0 0 No -26 0.48 No 52 86.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47704085 + NM_000251 MSH2 0 . . . 2.85 82.68 16 5.02 No 27 1.07 Yes 0 0 No -27 0.94 Yes 46 86.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68596137 + NM_133509 RAD51B 0 . . . 0.15 66.1 16 5.66 Yes 46 0.25 No 0 0 No -21 0.41 No 45 78.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105172024 + NM_021930 RINT1 0 . . . 6 75.81 13 5.2 No 71 1.52 Yes 0 0 No -20 0.84 Yes 40 72.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108157917 + NM_000051 ATM 0 . . . 4.26 72.34 30 5.37 No 62 -4.18 No 0 0 No -22 0.84 Yes 39 49.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190724705 + NM_000534 PMS1 0 . . . 0.31 70.95 19 4.8 No 32 0.2 No 0 0 No -18 0.39 No 35 74.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190683935 + NM_000534 PMS1 0 . . . 0.98 69.29 30 5.48 No 19 1.31 Yes 0 0 No -23 0.4 No 30 54.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68494327 + NM_133509 RAD51B 0 . . . 7.09 85.76 36 5.36 No 70 0.34 No 0 0 No -32 0.78 Yes 48 70.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47738420 + NM_000251 MSH2 0 . . . 7.3 81.97 30 5.04 No 52 1.37 Yes 0 0 No -29 0.54 No 38 65.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41219318 - NM_007294 BRCA1 0 . . . 3.3 77.77 22 5.84 Yes 64 -4.85 No 0 0 No -21 0.39 No 53 59.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59838036 - NM_032043 BRIP1 0 . . . 9.03 94.1 28 5.48 No 58 0.2 No 0 0 No -23 0.65 No 47 71.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152368387 - NM_005431 XRCC2 0 . . . 2.27 63.76 21 7.21 Yes 74 -5.98 No 0 0 No -20 0.79 Yes 33 45.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47755167 + NM_000251 MSH2 0 . . . 4.24 76.12 16 4.69 No 57 1.34 Yes 0 0 No -15 0.25 No 48 36.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108238059 + NM_000051 ATM 0 . . . 5.36 74.33 14 4.47 No 32 1.12 Yes 0 0 No -48 0.38 No 42 89.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68403666 + NM_133509 RAD51B 0 . . . 5.71 75.19 28 4.55 No 76 0.95 Yes 0 0 No -27 0.74 Yes 37 92.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68400123 + NM_133509 RAD51B 0 . . . 1.94 71.38 28 5.29 No 9 0.44 No 0 0 No -27 0.76 Yes 49 44.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131942100 + NM_005732 RAD50 0 . . . 0.8 68.03 43 6.93 Yes 57 0.17 No 0 0 No -20 0.69 Yes 31 40.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47793484 + NM_000251 MSH2 0 . . . 9.21 85.12 23 5.06 No 13 1 Yes 0 0 No -22 0.41 No 45 70.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68583232 + NM_133509 RAD51B 0 . . . 6.66 86.38 10 4 No 9 0.27 No 0 0 No -23 0.79 Yes 49 90.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68590172 + NM_133509 RAD51B 0 . . . 3.19 70.85 29 5.41 No 18 0.58 No 0 0 No -28 0.32 No 40 89.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68963033 + NM_133509 RAD51B 0 . . . 5.94 78.65 31 6.36 Yes 25 0.24 No 0 0 No -29 0.49 No 44 80.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23651040 - NM_024675 PALB2 0 . . . 1.08 84.22 20 5.02 No 33 1.13 Yes 0 0 No -25 0.51 No 25 50.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68513531 + NM_133509 RAD51B 0 . . . 4.84 80.23 52 7.44 Yes 7 1.38 Yes 0 0 No -31 0.53 No 44 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68726621 + NM_133509 RAD51B 0 . . . 2.21 77.4 31 5.48 No 40 0.73 No 0 0 No -23 0.67 Yes 24 59.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68905496 + NM_133509 RAD51B 0 . . . 1.36 75 29 5.25 No 56 -2.5 No 0 0 No -24 0.61 No 42 58.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47647958 + NM_000251 MSH2 0 . . . 1.24 79.64 18 5.69 Yes 52 -2.54 No 0 0 No -28 0.65 No 45 31.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68612356 + NM_133509 RAD51B 0 . . . 0.64 80.19 36 6.41 Yes 20 1.27 Yes 0 0 No -56 0.62 No 52 86.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94150549 - NM_005591 MRE11 0 . . . 2.62 67.62 20 4.21 No 49 0.85 Yes 0 0 No -25 0.46 No 48 88.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108187624 + NM_000051 ATM 0 . . . 0.94 76.63 68 9.39 Yes 58 -3.89 No 0 0 No -17 0.4 No 48 35.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105185535 + NM_021930 RINT1 0 . . . 5.13 81.49 18 5.36 No 8 1.01 Yes 0 0 No -20 0.33 No 50 69.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29107491 - NM_001005735 CHEK2 0 . . . 5.21 72.99 18 3.94 No 54 1.63 Yes 0 0 No -28 0.37 No 50 78.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48019363 + NM_000179 MSH6 0 . . . 7.76 85.91 28 6.01 Yes 58 1.02 Yes 0 0 No -27 0.63 No 55 55.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68617808 + NM_133509 RAD51B 0 . . . 5.49 78.45 20 5.1 No 64 0.98 Yes 0 0 No -19 0.75 Yes 33 84.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68845840 + NM_133509 RAD51B 0 . . . 0.19 78.29 9 3.87 No -2 0.19 No 0 0 No -21 0.37 No 44 84.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59845284 - NM_032043 BRIP1 0 . . . 0.27 76.27 26 5.56 Yes 60 -5.41 No 0 0 No -24 0.65 No 49 49.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144387 + NM_133509 RAD51B 0 . . . 0.18 78.02 29 6.78 Yes 65 0.62 No 0 0 No -28 0.88 Yes 27 92.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104173740 - NM_001100119 XRCC3 0 . . . 7.5 84.21 19 4.9 No 2 2.15 Yes 0 0 No -51 0.61 No 56 64.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68479953 + NM_133509 RAD51B 0 . . . 2.78 74.2 44 7.06 Yes 26 -1.81 No 0 0 No -27 0.85 Yes 15 20.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68462722 + NM_133509 RAD51B 0 . . . 2.02 0 22 4.88 No 25 -3.28 No 0 0 No -28 0.49 No 52 34.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68516181 + NM_133509 RAD51B 0 . . . 1.84 74.24 26 4.74 No 44 0.98 Yes 0 0 No -25 0.95 Yes 57 38.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68635234 + NM_133509 RAD51B 0 . . . 1.88 65.84 27 5.29 No 46 0.13 No 0 0 No -26 0.96 Yes 50 80.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69015171 + NM_133509 RAD51B 0 . . . 0.57 68.09 15 5.74 Yes 68 0.74 No 0 0 No -28 0.44 No 46 77.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59900999 - NM_032043 BRIP1 0 . . . 10.13 95.65 33 5.49 No 4 0.96 Yes 0 0 No -21 0.48 No 46 83.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29102116 - NM_001005735 CHEK2 0 . . . 4.38 85.02 19 6.45 Yes 13 0.69 No 0 0 No -23 0.73 Yes 45 95.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59849631 - NM_032043 BRIP1 0 . . . 5.23 84.85 67 9.35 Yes 17 1.13 Yes 0 0 No -20 0.46 No 50 76.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68789335 + NM_004360 CDH1 0 . . . 1.96 57.2 16 4.57 No 17 0.24 No 0 0 No -31 0.42 No 41 59.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131967205 + NM_005732 RAD50 0 . . . 2.29 0 28 5.38 No 29 -3.63 No 0 0 No -27 0.79 Yes 43 58.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47680677 + NM_000251 MSH2 0 . . . 3.12 0 10 5 No 64 1.19 Yes 0 0 No -29 0.55 No 56 21.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59791253 - NM_032043 BRIP1 0 . . . 2.84 75.48 39 4.74 No 65 1.18 Yes 0 0 No -38 0.87 Yes 39 46.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68861044 + NM_004360 CDH1 0 . . . 1.03 67.51 27 5.39 No 37 0.43 No 0 0 No -26 0.89 Yes 52 41.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131934058 + NM_005732 RAD50 0 . . . 3.49 77.08 52 5.74 Yes 75 1.07 Yes 0 0 No -20 0.83 Yes 50 45.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69023767 + NM_133509 RAD51B 0 . . . 1.4 71.17 27 6.4 Yes 17 0.62 No 0 0 No -26 0.68 Yes 46 66.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47761559 + NM_000251 MSH2 0 . . . 4.65 83.77 30 7.52 Yes 4 0.83 Yes 0 0 No -29 0.74 Yes 54 47.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68293584 + NM_133509 RAD51B 0 . . . 9.17 86.16 20 4.3 No 74 0.62 No 0 0 No -19 0.55 No 46 55.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68796153 + NM_004360 CDH1 0 . . . 8.81 81.65 27 5.53 No 71 2.19 Yes 0 0 No -27 0.3 No 41 88.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68379022 + NM_133509 RAD51B 0 . . . 0.23 0 46 7.48 Yes 28 0.34 No 0 0 No -26 0.42 No 52 67.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68853021 + NM_133509 RAD51B 0 . . . 7.23 83.9 52 7.14 Yes 3 1.36 Yes 0 0 No -29 0.55 No 47 69.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68430345 + NM_133509 RAD51B 0 . . . 6.12 79.19 46 4.69 No 75 1.73 Yes 0 0 No -24 0.58 No 40 81.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37070995 + NM_000249 MLH1 0 . . . 3.26 81.87 74 8.33 Yes 7 1.18 Yes 0 0 No -39 0.56 No 51 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1219663 + NM_000455 STK11 0 . . . 6.05 86.71 29 6.18 Yes 76 1.47 Yes 0 0 No -28 0.45 No 50 92.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68295332 + NM_133509 RAD51B 0 . . . 9.89 85.29 30 5.95 Yes 62 0.57 No 0 0 No -25 0.47 No 46 93.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68397290 + NM_133509 RAD51B 0 . . . 4.74 80.75 41 5.58 Yes 44 1.27 Yes 0 0 No -33 0.37 No 49 83.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68312556 + NM_133509 RAD51B 0 . . . 9.06 76.08 9 3.87 No 28 1.33 Yes 0 0 No -50 0.65 No 51 81.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190711211 + NM_000534 PMS1 0 . . . 2.18 76.63 24 4.97 No 15 0.43 No 0 0 No -23 0.51 No 43 56.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75508086 - NM_001040108 MLH3 0 . . . 1.58 80.12 38 6.44 Yes 73 0.04 No 0 0 No -25 0.93 Yes 47 64.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108163093 + NM_000051 ATM 0 . . . 5.72 84.9 17 4.8 No 0 0.86 Yes 0 0 No -24 0.36 No 41 55.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89682495 + NM_000314 PTEN 0 . . . 4.98 86.46 14 4.24 No 74 0.04 No 0 0 No -31 0.28 No 47 72.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190647481 + NM_000534 PMS1 0 . . . 3.14 78.02 24 4.9 No 34 -3.07 No 0 0 No -23 0.93 Yes 48 47.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68652497 + NM_133509 RAD51B 0 . . . 0.51 0 16 6.29 Yes 73 0.06 No 0 0 No -22 0.64 No 50 51.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190703270 + NM_000534 PMS1 0 . . . 3.14 0 18 5.41 No 72 1.17 Yes 0 0 No -28 0.86 Yes 49 64.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68854248 + NM_133509 RAD51B 0 . . . 4.41 80.11 20 5.58 Yes 28 0.96 Yes 0 0 No -19 0.72 Yes 49 44.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90945733 - NM_002485 NBN 0 . . . 1.41 65.61 31 6.08 Yes 42 1.27 Yes 0 0 No -30 0.93 Yes 48 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68678673 + NM_133509 RAD51B 0 . . . 2.41 68.51 40 6.48 Yes 22 0.73 No 0 0 No -20 0.4 No 49 74.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68830564 + NM_133509 RAD51B 0 . . . 9.21 78.25 24 5 No 19 0.84 Yes 0 0 No -23 0.44 No 39 78.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89652081 + NM_000314 PTEN 0 . . . 6.75 78.65 22 5.29 No 73 -2.4 No 0 0 No -21 0.68 Yes 35 87.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108203591 + NM_000051 ATM 0 . . . 2.77 72.57 31 5.66 Yes 52 -5.05 No 0 0 No -30 0.86 Yes 40 42.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89725797 + NM_000314 PTEN 0 . . . 3.26 80.92 22 4.92 No 25 0.31 No 0 0 No -21 0.45 No 38 35.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68656261 + NM_133509 RAD51B 0 . . . 3.5 74.2 24 5.29 No 0 0.87 Yes 0 0 No -23 0.76 Yes 50 64.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32966826 + NM_000059 BRCA2 0 . . . 3.65 77.22 13 4.94 No 65 1.16 Yes 0 0 No -28 0.67 Yes 35 45.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47642555 + NM_000251 MSH2 0 . . . 1.67 65.35 24 7.22 Yes 55 0.79 Yes 0 0 No -49 0.48 No 20 53.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152346515 - NM_005431 XRCC2 0 . . . 8.68 84.61 27 6.63 Yes 13 0.76 No 0 0 No -26 0.73 Yes 44 64.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75501682 - NM_001040108 MLH3 0 . . . 0.07 0 17 4.8 No 16 1.15 Yes 0 0 No -43 0.68 Yes 42 95.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41025118 + NM_001164269 RAD51 0 . . . 6.11 82.31 18 4.9 No 61 1.36 Yes 0 0 No -17 0.49 No 49 58.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21995043 - NM_000077 CDKN2A 0 . . . 6.45 78.07 15 4.48 No 12 0.42 No 0 0 No -28 0.36 No 40 50.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68369456 + NM_133509 RAD51B 0 . . . 4.62 92.56 24 6.31 Yes 66 0.66 No 0 0 No -23 0.8 Yes 52 64.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68508405 + NM_133509 RAD51B 0 . . . 2.53 0 19 5.83 Yes 50 1.33 Yes 0 0 No -18 0.52 No 19 24.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215650868 - NM_000465 BARD1 0 . . . 5.49 74.56 18 4.9 No 17 0.8 Yes 0 0 No -22 0.75 Yes 41 88.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41239141 - NM_007294 BRCA1 0 . . . 6.19 75.42 15 5.1 No 60 1.22 Yes 0 0 No -21 0.92 Yes 48 73.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89645895 + NM_000314 PTEN 0 . . . 4.22 68.78 31 4.62 No 74 0.28 No 0 0 No -27 0.35 No 36 74.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68565780 + NM_133509 RAD51B 0 . . . 6.08 70.58 28 5.38 No 25 0.64 No 0 0 No -27 0.5 No 33 73.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59838854 - NM_032043 BRIP1 0 . . . 0.33 74.37 34 5.37 No 29 1.55 Yes 0 0 No -33 0.63 No 29 84.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47712874 + NM_000251 MSH2 0 . . . 3.49 78.97 25 5.47 No -1 0.69 No 0 0 No -24 0.89 Yes 50 93.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6027018 - NM_000535 PMS2 0 . . . 2.7 0 14 4.47 No 63 -2.28 No 0 0 No -27 0.63 No 35 34.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59760392 - NM_032043 BRIP1 0 . . . 1.41 84.22 17 6.38 Yes 32 1.11 Yes 0 0 No -16 0.54 No 50 65.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69053371 + NM_133509 RAD51B 0 . . . 7.05 81.53 33 5.69 Yes 74 -5.35 No 0 0 No -33 0.51 No 56 40.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6039447 - NM_000535 PMS2 0 . . . 3.02 73.76 20 5.05 No 46 -4.11 No 0 0 No -29 0.58 No 44 70.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108150790 + NM_000051 ATM 0 . . . 3.3 66.92 17 4.69 No 1 0.89 Yes 0 0 No -16 0.31 No 40 61.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68408680 + NM_133509 RAD51B 0 . . . 6.2 91.59 16 4.69 No 3 0.63 No 0 0 No -39 0.63 No 55 28.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68373736 + NM_133509 RAD51B 0 . . . 2 80.34 20 4.74 No 32 1.13 Yes 0 0 No -19 0.55 No 42 59.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68593507 + NM_133509 RAD51B 0 . . . 4.23 86.49 19 5 No 45 1.25 Yes 0 0 No -41 0.56 No 48 81.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1220058 + NM_000455 STK11 0 . . . 7.3 91.09 31 6.43 Yes 14 0.02 No 0 0 No -23 0.68 Yes 50 63.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89633542 + NM_000314 PTEN 0 . . . 4.98 73.44 20 4.89 No -1 1.01 Yes 0 0 No -49 0.33 No 43 91.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68288821 + NM_133509 RAD51B 0 . . . 3.02 75.77 28 4.67 No 48 -5.15 No 0 0 No -22 0.45 No 49 45.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47774296 + NM_000251 MSH2 0 . . . 7.08 83.47 37 7.35 Yes 3 0.85 Yes 0 0 No -36 0.83 Yes 54 48.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68990473 + NM_133509 RAD51B 0 . . . 3.35 70.6 29 5.39 No 20 -0.73 No 0 0 No -28 0.75 Yes 43 35.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59934686 - NM_032043 BRIP1 0 . . . 6.26 86.39 21 5.9 Yes 5 0.78 Yes 0 0 No -23 0.55 No 46 81.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52444397 - NM_004656 BAP1 0 . . . 4.12 73.08 29 5.47 No NA NA NA 0 0 No -28 0.97 Yes 32 69.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68405711 + NM_133509 RAD51B 0 . . . 5.2 80.4 31 6.63 Yes 24 0.56 No 0 0 No -30 0.9 Yes 34 78.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68518268 + NM_133509 RAD51B 0 . . . 7.3 86.84 33 4.57 No 12 0.43 No 0 0 No -28 0.41 No 46 87.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89719294 + NM_000314 PTEN 0 . . . 3.16 67.03 37 6.86 Yes 65 1.54 Yes 0 0 No -36 0.74 Yes 42 24.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59801028 - NM_032043 BRIP1 0 . . . 0.11 62.76 14 4.47 No 60 -2.53 No 0 0 No -18 0.51 No 53 32.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32895182 + NM_000059 BRCA2 0 . . . 3.73 68.78 26 5.39 No 76 0.35 No 0 0 No -25 0.89 Yes 49 54.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69077264 + NM_133509 RAD51B 0 . . . 3.08 78.45 22 6.39 Yes 10 1.24 Yes 0 0 No -21 0.67 Yes 48 73.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131892412 + NM_005732 RAD50 0 . . . 6.13 87.03 38 6.74 Yes 37 2.06 Yes 0 0 No -24 0.52 No 21 70.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108170143 + NM_000051 ATM 0 . . . 1.41 84.22 19 5 No 33 1.13 Yes 0 0 No -39 0.46 No 50 71.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94171423 - NM_005591 MRE11 0 . . . 9.15 72.86 25 5.39 No 20 0.29 No 0 0 No -22 0.72 Yes 38 81.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68910863 + NM_133509 RAD51B 0 . . . 4.25 82.19 28 5.21 No 54 0.72 No 0 0 No -27 0.22 No 47 95.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40990100 + NM_001164269 RAD51 0 . . . 1.75 67.87 38 6.86 Yes 57 0.52 No 0 0 No -33 0.71 Yes 32 44.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59917971 - NM_032043 BRIP1 0 . . . 4.71 78.71 58 5.89 Yes -2 1.09 Yes 0 0 No -32 0.44 No 42 73.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68662879 + NM_133509 RAD51B 0 . . . 1.27 76.63 26 6.32 Yes 45 -3.05 No 0 0 No -25 0.88 Yes 42 56.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47787626 + NM_000251 MSH2 0 . . . 4.56 73.02 14 5.36 No 29 2.22 Yes 0 0 No -22 0.65 No 29 77.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68752142 + NM_133509 RAD51B 0 . . . 4.32 79 15 4.58 No 65 0.95 Yes 0 0 No -26 0.45 No 57 31.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47705862 + NM_000251 MSH2 0 . . . 1.95 73.03 35 6.69 Yes 67 0.58 No 0 0 No -26 0.56 No 46 93.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37043569 + NM_000249 MLH1 0 . . . 2.1 84.22 23 4.67 No 33 1.01 Yes 0 0 No -22 0.77 Yes 50 45.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32920250 + NM_000059 BRCA2 0 . . . 1.55 0 14 4.69 No 33 0.11 No 0 0 No -22 0.73 Yes 49 54.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37035899 + NM_000249 MLH1 0 . . . 2.94 67.2 22 4.69 No 1 0.03 No 0 0 No -21 0.8 Yes 50 35.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47667519 + NM_000251 MSH2 0 . . . 5.02 79.06 25 6.16 Yes 71 1.31 Yes 0 0 No -24 0.91 Yes 44 74.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56771911 + NM_058216 RAD51C 0 . . . 0.18 75.29 28 5.57 Yes 61 1.04 Yes 0 0 No -27 0.74 Yes 60 18.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41208561 - NM_007294 BRCA1 0 . . . 2.93 70.85 23 5.97 Yes 21 2 Yes 0 0 No -30 0.35 No 37 80.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68838646 + NM_004360 CDH1 0 . . . 1.19 61.8 39 5.41 No 48 0.82 Yes 0 0 No -24 0.69 Yes 48 21.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21976768 - NM_000077 CDKN2A 0 . . . 6.41 88.54 24 4.84 No 37 0.94 Yes 0 0 No -20 0.37 No 48 78.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47797258 + NM_000251 MSH2 0 . . . 0.07 68.88 13 4.12 No 12 -0.46 No 0 0 No -25 0.71 Yes 46 16.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68738873 + NM_133509 RAD51B 0 . . . 1.25 77.77 27 6.44 Yes 58 1.06 Yes 0 0 No -26 0.65 No 34 64.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108180846 + NM_000051 ATM 0 . . . 3.99 76.23 24 5.48 No 53 0.68 No 24 0.73 Yes -23 0.48 No 41 54.88 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 29104093 - NM_001005735 CHEK2 0 . . . 0.09 74.68 40 5.71 Yes 4 0.41 No 0 0 No -39 0.48 No 54 67.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68561638 + NM_133509 RAD51B 0 . . . 3.98 85.07 29 5.48 No 26 0.84 Yes 0 0 No -27 0.37 No 42 73.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152353284 - NM_005431 XRCC2 0 . . . 8.83 81.33 31 5.48 No 48 0.13 No 0 0 No -30 0.8 Yes 45 51.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68715475 + NM_133509 RAD51B 0 . . . 1.33 71.62 20 4.43 No 31 -2.04 No 0 0 No -20 0.4 No 43 73.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47633852 + NM_000251 MSH2 0 . . . 7.11 79.07 15 4.36 No 6 0.55 No 0 0 No -23 0.36 No 52 84.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68778048 + NM_133509 RAD51B 0 . . . 7.71 74.39 21 5.05 No 29 -3.96 No 0 0 No -20 0.79 Yes 44 47.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89685285 + NM_000314 PTEN 0 . . . 0.54 74.29 16 5.74 Yes 38 1.08 Yes 0 0 No -24 0.67 Yes 20 93.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32897622 + NM_000059 BRCA2 0 . . . 3.49 82.82 28 5.38 No 31 0.19 No 0 0 No -27 0.69 Yes 43 62.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68828098 + NM_004360 CDH1 0 . . . 0.32 75.65 22 5.19 No 52 0.48 No 0 0 No -21 0.81 Yes 48 83.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84405472 - NM_139076 FAM175A 0 . . . 0.22 0 14 3.9 No 46 -4.42 No 0 0 No -21 0.74 Yes 50 75.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41198772 - NM_007294 BRCA1 0 . . . 6.3 88.76 21 5.66 Yes 17 1.2 Yes 0 0 No -20 0.65 No 41 72.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68638387 + NM_133509 RAD51B 0 . . . 2.42 0 24 5.1 No 33 0.58 No 0 0 No -23 0.84 Yes 53 57.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190732141 + NM_000534 PMS1 0 . . . 8.91 94.94 21 3.72 No 39 0.49 No 0 0 No -20 0.83 Yes 49 88.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190697322 + NM_000534 PMS1 0 . . . 1.79 0 23 5.33 No 20 0.05 No 0 0 No -22 0.67 Yes 18 26.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69032277 + NM_133509 RAD51B 0 . . . 3.96 74.72 25 5.15 No 71 0.24 No 0 0 No -24 0.32 No 47 79.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94193116 - NM_005591 MRE11 0 . . . 8.79 88.08 23 4.51 No 8 1.65 Yes 0 0 No -22 0.81 Yes 50 89.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89627876 + NM_000314 PTEN 0 . . . 0.41 0 26 5.63 Yes 15 -3.01 No 0 0 No -25 0.71 Yes 16 26.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33432494 - NM_002878 RAD51D 0 . . . 4.48 72.37 18 4.25 No 76 0.67 No 0 0 No -37 0.5 No 43 38.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48007193 + NM_000179 MSH6 0 . . . 1.45 70.25 25 7.21 Yes 29 0.68 No 0 0 No -24 0.92 Yes 22 30.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89690525 + NM_000314 PTEN 0 . . . 0.28 75.77 28 5.27 No 29 -2.75 No 0 0 No -21 0.72 Yes 48 75.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215642981 - NM_000465 BARD1 0 . . . 3.35 71.34 20 5.03 No 72 0.4 No 0 0 No -49 0.64 No 48 67.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68820465 + NM_004360 CDH1 0 . . . 8.17 94.14 21 5.09 No 46 1.71 Yes 0 0 No -20 0.77 Yes 12 74.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68563122 + NM_133509 RAD51B 0 . . . 5.87 75.17 10 5.29 No 29 1.38 Yes 0 0 No -21 0.45 No 33 74.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90963722 - NM_002485 NBN 0 . . . 5.77 80.1 32 5.99 Yes 64 0.2 No 0 0 No -29 0.41 No 19 53.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68786361 + NM_004360 CDH1 0 . . . 3.03 67.51 17 4.61 No 22 1 Yes 0 0 No -16 0.61 No 36 73.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68670769 + NM_133509 RAD51B 0 . . . 1.72 64.33 14 4.85 No 6 0.85 Yes 0 0 No -28 0.69 Yes 45 79.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108141911 + NM_000051 ATM 0 . . . 6 77.82 24 4.34 No -3 0.06 No 0 0 No -23 0.42 No 43 50.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108215706 + NM_000051 ATM 0 . . . 3.99 0 31 5.46 No 13 0.57 No 0 0 No -25 0.38 No 45 54.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68473876 + NM_133509 RAD51B 0 . . . 4.84 81.21 22 4.69 No 17 0.98 Yes 0 0 No -22 0.27 No 32 58.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29111354 - NM_001005735 CHEK2 0 . . . 2.87 86.46 20 6.55 Yes 44 -3.75 No 0 0 No -28 0.35 No 51 61.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190672795 + NM_000534 PMS1 0 . . . 5.47 81.46 38 5.71 Yes 0 0.84 Yes 0 0 No -32 0.68 Yes 50 61.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56776990 + NM_058216 RAD51C 0 . . . 8.17 79.58 49 7.07 Yes 14 0.13 No 0 0 No -24 0.46 No 45 46.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68899517 + NM_133509 RAD51B 0 . . . 4.61 70.08 27 9.32 Yes 6 0.5 No 0 0 No -26 0.63 No 31 62.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75488692 - NM_001040108 MLH3 0 . . . 2.86 64 28 5.57 Yes 15 0.82 Yes 0 0 No -27 0.8 Yes 43 90.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6010039 - NM_000535 PMS2 0 . . . 1.05 0 15 5.97 Yes 29 0.28 No 0 0 No -21 0.77 Yes 62 27.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59778494 - NM_032043 BRIP1 0 . . . 1.84 79.63 33 5.68 Yes 72 -4.42 No 0 0 No -26 0.72 Yes 43 29.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37073260 + NM_000249 MLH1 0 . . . 1.8 64.97 15 5.26 No 24 0.53 No 0 0 No -26 0.47 No 45 81.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68972715 + NM_133509 RAD51B 0 . . . 2.88 60.48 24 4.98 No 64 -1.11 No 0 0 No -23 0.88 Yes 42 54.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89631512 + NM_000314 PTEN 0 . . . 1.78 82.58 38 5.95 Yes 3 0.91 Yes 0 0 No -37 0.43 No 50 67.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68293475 + NM_133509 RAD51B 0 . . . 4.07 74.68 11 4.12 No 40 -0.31 No 0 0 No -33 0.77 Yes 13 40.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68888694 + NM_133509 RAD51B 0 . . . 0.42 69.92 30 4.46 No 26 0.22 No 0 0 No -28 0.41 No 32 97.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89713299 + NM_000314 PTEN 0 . . . 1.21 85.27 23 5.09 No 76 -5.48 No 0 0 No -22 0.48 No 45 36.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68325267 + NM_133509 RAD51B 0 . . . 2.08 57.06 22 6.92 Yes 66 0.03 No 0 0 No -28 0.61 No 38 92.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59772199 - NM_032043 BRIP1 0 . . . 1.11 69.26 15 4.12 No 57 -5 No 0 0 No -29 0.81 Yes 46 44.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68903474 + NM_133509 RAD51B 0 . . . 5.19 77.66 19 5.87 Yes 59 1.22 Yes 0 0 No -18 0.66 No 44 85.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190680582 + NM_000534 PMS1 0 . . . 2.98 67.58 14 4.12 No 61 0.6 No 0 0 No -40 0.71 Yes 53 68.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152366385 - NM_005431 XRCC2 0 . . . 2.42 0 43 4.91 No 63 1.02 Yes 0 0 No -27 0.62 No 48 44.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190724672 + NM_000534 PMS1 0 . . . 7.62 86.1 15 5.48 No -1 0.11 No 0 0 No -28 0.4 No 40 68.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69037346 + NM_133509 RAD51B 0 . . . 0.13 0 21 4.98 No 48 -4.68 No 0 0 No -27 0.47 No 39 40.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59868683 - NM_032043 BRIP1 0 . . . 3.17 80.12 26 6.16 Yes 7 1.24 Yes 0 0 No -21 0.52 No 51 91.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68430224 + NM_133509 RAD51B 0 . . . 1.39 69.14 28 5.83 Yes 26 0.38 No 0 0 No -27 0.26 No 28 43.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215612076 - NM_000465 BARD1 0 . . . 1.5 67.39 42 5.24 No 27 -3.53 No 0 0 No -41 0.46 No 46 80.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45804114 - NM_001048171 MUTYH 0 . . . 2.34 79.41 31 5.44 No 76 -6.11 No 0 0 No -30 0.93 Yes 42 62.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94222562 - NM_005591 MRE11 0 . . . 1.31 66.27 15 5.07 No 40 0.24 No 0 0 No -48 0.9 Yes 48 43.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68843908 + NM_004360 CDH1 0 . . . 3.51 74.09 58 7.87 Yes 45 1.72 Yes 0 0 No -29 0.77 Yes 48 87.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47763065 + NM_000251 MSH2 0 . . . 2.7 74.21 24 5.8 Yes 58 0.8 Yes 0 0 No -23 0.62 No 52 32.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68567804 + NM_133509 RAD51B 0 . . . 3.78 67.91 15 5.9 Yes 50 -3.74 No 0 0 No -23 0.62 No 57 32.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69045695 + NM_133509 RAD51B 0 . . . 4.94 70.8 29 6.51 Yes 4 1.24 Yes 0 0 No -28 0.75 Yes 40 55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68583260 + NM_133509 RAD51B 0 . . . 1.83 68.72 25 7.48 Yes 37 0.31 No 0 0 No -24 0.93 Yes 21 82.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68996388 + NM_133509 RAD51B 0 . . . 6.19 69.35 38 6.96 Yes 57 0.39 No 0 0 No -26 0.76 Yes 43 78.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68950637 + NM_133509 RAD51B 0 . . . 1.35 66.52 40 6.21 Yes 65 0.92 Yes 0 0 No -32 0.61 No 54 73.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68658840 + NM_133509 RAD51B 0 . . . 1.95 0 32 5.74 Yes 72 1.69 Yes 0 0 No -50 0.44 No 34 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41232315 - NM_007294 BRCA1 0 . . . 2.37 61.14 21 5.2 No 24 1.09 Yes 0 0 No -20 0.54 No 23 47.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215615916 - NM_000465 BARD1 0 . . . 3.6 71.89 25 5.8 Yes 70 -3.03 No 0 0 No -24 0.82 Yes 51 63.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47792232 + NM_000251 MSH2 0 . . . 2.63 87.29 13 4.98 No 48 1.12 Yes 0 0 No -23 0.72 Yes 51 55.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37076415 + NM_000249 MLH1 0 . . . 4.55 77.23 29 5.67 Yes 15 1.21 Yes 0 0 No -28 0.81 Yes 43 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6034956 - NM_000535 PMS2 0 . . . 7.86 72.26 27 6.04 Yes 11 0.4 No 0 0 No -26 0.8 Yes 42 76.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40992923 + NM_001164269 RAD51 0 . . . 0.84 66.39 31 5.62 Yes 19 0.75 No 0 0 No -28 0.84 Yes 63 28.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68363286 + NM_133509 RAD51B 0 . . . 3.84 76.46 10 4.58 No 54 1.38 Yes 0 0 No -38 0.2 No 37 69.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68584253 + NM_133509 RAD51B 0 . . . 11.15 80.41 11 4.12 No 71 -0.3 No 0 0 No -33 0.25 No 46 36.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32947396 + NM_000059 BRCA2 0 . . . 2.48 79.83 14 4.36 No 35 0.25 No 0 0 No -24 0.52 No 54 61.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68285107 + NM_133509 RAD51B 0 . . . 6.35 72.95 20 5.1 No 23 1.89 Yes 0 0 No -22 0.53 No 35 84.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59864679 - NM_032043 BRIP1 0 . . . 5.11 78.07 27 7.03 Yes 20 0.58 No 0 0 No -34 0.54 No 31 66.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108211082 + NM_000051 ATM 0 . . . 6.06 73.38 29 5.64 Yes 28 -2.11 No 0 0 No -28 0.86 Yes 43 82.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190717992 + NM_000534 PMS1 0 . . . 1.74 77.18 24 5.9 Yes 35 0.98 Yes 0 0 No -21 0.72 Yes 18 33.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29109703 - NM_001005735 CHEK2 0 . . . 0.67 0 15 4.38 No 70 -4.64 No 0 0 No -21 0.51 No 51 48.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29136105 - NM_001005735 CHEK2 0 . . . 2.86 71.84 25 5.39 No 16 1.12 Yes 0 0 No -24 0.73 Yes 42 88.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68515370 + NM_133509 RAD51B 0 . . . 0.36 62.69 40 7.4 Yes 62 1.18 Yes 0 0 No -28 0.52 No 11 37.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68618824 + NM_133509 RAD51B 0 . . . 2.95 70.85 13 4.36 No 13 0.81 Yes 0 0 No -20 0.52 No 45 76.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108104013 + NM_000051 ATM 0 . . . 0.77 75.36 20 5.1 No 67 -5.48 No 0 0 No -19 0.66 No 53 41.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47777044 + NM_000251 MSH2 0 . . . 0.09 76.63 48 6.82 Yes 67 -4.96 No 0 0 No -30 0.61 No 48 79.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90987844 - NM_002485 NBN 0 . . . 1.25 67.13 20 4.9 No 72 0.33 No 0 0 No -19 0.57 No 25 31.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69073643 + NM_133509 RAD51B 0 . . . 2.66 79.89 18 4.47 No 73 2.01 Yes 0 0 No -37 0.45 No 44 67.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68623518 + NM_133509 RAD51B 0 . . . 7.65 93.46 27 5.73 Yes 8 0.78 Yes 0 0 No -26 0.63 No 50 30.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59894300 - NM_032043 BRIP1 0 . . . 3.12 78.65 15 5.73 Yes 3 1.13 Yes 0 0 No -28 0.44 No 39 61.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84402372 - NM_139076 FAM175A 0 . . . 1.27 72.99 19 5 No 53 0.97 Yes 0 0 No -18 0.53 No 53 22.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68845671 + NM_004360 CDH1 0 . . . 3.29 75.22 21 4.47 No 1 0.25 No 0 0 No -20 0.8 Yes 50 68.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108120658 + NM_000051 ATM 0 . . . 1.35 63.75 25 6.71 Yes 16 0.57 No 0 0 No -24 0.86 Yes 46 69.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131905802 + NM_005732 RAD50 0 . . . 0 64.27 63 9.04 Yes 15 0.09 No 0 0 No -25 0.59 No 43 74.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59910407 - NM_032043 BRIP1 0 . . . 3.55 73.89 19 4.8 No 5 1.01 Yes 0 0 No -24 0.6 No 49 71.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105207942 + NM_021930 RINT1 0 . . . 7.71 81.57 26 7.35 Yes 19 2.27 Yes 0 0 No -29 0.85 Yes 39 93.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68382465 + NM_133509 RAD51B 0 . . . 2.99 78.63 28 5.66 Yes 51 -3.36 No 0 0 No -25 0.53 No 47 94.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68776883 + NM_004360 CDH1 0 . . . 2.13 84.52 19 4.86 No 73 -1.67 No 0 0 No -29 0.45 No 47 59.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68740771 + NM_133509 RAD51B 0 . . . 2.1 71.46 34 5.8 Yes 48 1.15 Yes 0 0 No -27 0.57 No 38 55.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59906342 - NM_032043 BRIP1 0 . . . 4.74 74.96 35 5.66 Yes 5 1.12 Yes 0 0 No -34 0.69 Yes 47 76.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29107464 - NM_001005735 CHEK2 0 . . . 4.19 84.47 19 8.88 Yes 8 0.17 No 0 0 No -37 0.59 No 43 64.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59875987 - NM_032043 BRIP1 0 . . . 5.84 86.09 20 4.8 No 4 1.45 Yes 0 0 No -19 0.86 Yes 48 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21981952 - NM_000077 CDKN2A 0 . . . 0.27 0 19 4.58 No 60 -3.59 No 0 0 No -38 0.69 Yes 33 60.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68581490 + NM_133509 RAD51B 0 . . . 0.42 69.02 25 5.14 No 55 0.61 No 0 0 No -22 0.71 Yes 49 59.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68621367 + NM_133509 RAD51B 0 . . . 0.22 54.84 25 5.29 No 66 1.22 Yes 0 0 No -22 0.58 No 32 69.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68616305 + NM_133509 RAD51B 0 . . . 5.89 75.77 18 4.58 No 70 0.34 No 0 0 No -40 0.77 Yes 40 75.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131940391 + NM_005732 RAD50 0 . . . 2.04 68.01 18 5.29 No 22 0.72 No 0 0 No -21 0.58 No 36 95.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89643151 + NM_000314 PTEN 0 . . . 0.79 0 19 4.69 No 19 0.17 No 0 0 No -18 0.5 No 43 66.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68618305 + NM_133509 RAD51B 0 . . . 5.73 78.93 71 7.3 Yes 24 1.32 Yes 0 0 No -23 0.5 No 48 43.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69086582 + NM_133509 RAD51B 0 . . . 5.43 77.84 30 6.71 Yes 58 0.87 Yes 0 0 No -29 0.92 Yes 35 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41228274 - NM_007294 BRCA1 0 . . . 5.51 81.57 26 5.79 Yes 50 -2.45 No 0 0 No -30 0.78 Yes 49 52.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131955547 + NM_005732 RAD50 0 . . . 1.58 66.47 38 6.31 Yes NA NA NA 0 0 No -25 0.48 No 26 48.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47667459 + NM_000251 MSH2 0 . . . 3.97 84.41 17 5.33 No 21 1.42 Yes 0 0 No -16 0.73 Yes 47 71.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68459175 + NM_133509 RAD51B 0 . . . 4.85 69.24 31 5.29 No 67 -5.3 No 0 0 No -30 0.83 Yes 46 21.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37036139 + NM_000249 MLH1 0 . . . 0.09 65.56 52 6.83 Yes 71 -2.12 No 0 0 No -21 0.47 No 31 38.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41267516 - NM_007294 BRCA1 0 . . . 2.12 84.41 19 5 No 18 0.89 Yes 0 0 No -23 0.47 No 40 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68683195 + NM_133509 RAD51B 0 . . . 1.73 75.27 22 4.45 No 30 -3.47 No 0 0 No -22 0.66 No 44 84.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68832986 + NM_133509 RAD51B 0 . . . 0.08 60.21 29 6.69 Yes 45 1.32 Yes 0 0 No -29 0.57 No 50 52.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32919034 + NM_000059 BRCA2 0 . . . 0.8 56 20 5.4 No 67 0.29 No 0 0 No -28 0.54 No 57 24.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68782611 + NM_133509 RAD51B 0 . . . 2.84 82.13 32 6.56 Yes 57 1.26 Yes 0 0 No -32 0.89 Yes 24 76.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75501928 - NM_001040108 MLH3 0 . . . 6.75 82.18 36 7.6 Yes 74 0.84 Yes 0 0 No -24 0.54 No 43 82.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89678441 + NM_000314 PTEN 0 . . . 1.78 73.28 34 5.83 Yes -2 0.55 No 0 0 No -33 0.56 No 44 79.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56779451 + NM_058216 RAD51C 0 . . . 4.54 89.25 27 6.08 Yes -3 0.84 Yes 0 0 No -27 0.81 Yes 49 91.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94206005 - NM_005591 MRE11 0 . . . 0.59 68.46 103 9.38 Yes 19 0.2 No 0 0 No -23 0.52 No 49 62.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68496733 + NM_133509 RAD51B 0 . . . 4.37 86.73 23 5.39 No 6 0.38 No 0 0 No -22 0.84 Yes 41 85.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68844266 + NM_133509 RAD51B 0 . . . 6.85 79.16 25 5.38 No 46 -1.5 No 0 0 No -22 0.5 No 32 56.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666541 - NM_000465 BARD1 0 . . . 3.88 73.18 22 5.21 No -4 0.03 No 0 0 No -26 0.74 Yes 41 26.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215656428 - NM_000465 BARD1 0 . . . 4.86 75.89 25 5.56 Yes 46 0.58 No 0 0 No -24 0.93 Yes 43 70.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75512689 - NM_001040108 MLH3 0 . . . 1.15 77.77 28 5.48 No 34 0.8 Yes 0 0 No -26 0.41 No 19 71.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68713736 + NM_133509 RAD51B 0 . . . 3.21 81.84 21 5.13 No 47 0.78 Yes 0 0 No -21 0.42 No 42 47.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33437127 - NM_002878 RAD51D 0 . . . 1.79 65.89 31 5.83 Yes 16 -2.22 No 0 0 No -30 0.89 Yes 42 65.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215661257 - NM_000465 BARD1 0 . . . 7.65 76.69 23 4.8 No 47 0.67 No 0 0 No -22 0.51 No 39 47.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89730722 + NM_000314 PTEN 0 . . . 5.3 75.91 22 4.39 No -4 1.24 Yes 0 0 No -17 0.66 Yes 34 53.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68907870 + NM_133509 RAD51B 0 . . . 2.28 74.27 13 4.36 No 16 0.83 Yes 0 0 No -58 0.33 No 44 68.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32894814 + NM_000059 BRCA2 0 . . . 1.46 76.62 46 7.08 Yes 61 -3.93 No 0 0 No -38 0.51 No 42 50.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68844194 + NM_133509 RAD51B 0 . . . 5.46 87.52 21 7.21 Yes 12 0.05 No 0 0 No -20 0.87 Yes 46 51.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68518765 + NM_133509 RAD51B 0 . . . 2.41 68.41 29 5.29 No 48 -4.95 No 0 0 No -21 0.55 No 50 32.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41202598 - NM_007294 BRCA1 0 . . . 0.53 0 22 4.9 No 45 1.43 Yes 0 0 No -21 0.37 No 14 76.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68835487 + NM_133509 RAD51B 0 . . . 0.59 71.17 26 6.4 Yes 18 1.03 Yes 0 0 No -25 0.79 Yes 40 70.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69083608 + NM_133509 RAD51B 0 . . . 3.89 80.73 37 4.47 No 34 0.15 No 0 0 No -22 0.51 No 47 91.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90961614 - NM_002485 NBN 0 . . . 1.79 81.89 17 4.47 No 50 0.19 No 0 0 No -48 0.64 No 46 72.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68714420 + NM_133509 RAD51B 0 . . . 3.06 75.47 26 7.78 Yes 0 1.58 Yes 0 0 No -25 0.6 No 39 60.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94173794 - NM_005591 MRE11 0 . . . 3.35 79.59 24 5.36 No 63 0.71 No 0 0 No -40 0.71 Yes 47 92.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68860623 + NM_133509 RAD51B 0 . . . 3.11 68.79 10 4 No 32 0.94 Yes 0 0 No -22 0.66 Yes 26 76.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59875712 - NM_032043 BRIP1 0 . . . 2.12 58.79 42 7.21 Yes 63 1.57 Yes 0 0 No -41 0.33 No 33 63.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23620761 - NM_024675 PALB2 0 . . . 5.82 82.89 29 5.92 Yes 6 0.69 No 0 0 No -28 0.62 No 47 66.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131936128 + NM_005732 RAD50 0 . . . 1.56 81.42 24 4.96 No -4 0.4 No 0 0 No -23 0.63 No 51 47.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59885492 - NM_032043 BRIP1 0 . . . 1.36 66.47 10 3.71 No 59 0.2 No 0 0 No -33 0.93 Yes 51 45.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68742905 + NM_133509 RAD51B 0 . . . 7.65 73.96 22 5.28 No 30 0.09 No 0 0 No -21 0.55 No 42 62.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215594161 - NM_000465 BARD1 0 . . . 5.86 80.01 22 6.83 Yes 20 0.16 No 0 0 No -21 0.96 Yes 49 88.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68664782 + NM_133509 RAD51B 0 . . . 6.63 78.03 17 4.67 No 24 0.43 No 0 0 No -31 0.28 No 42 89.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68838135 + NM_004360 CDH1 0 . . . 4.71 84.22 19 5.83 Yes 8 0.91 Yes 0 0 No -27 0.66 No 50 86.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69029964 + NM_133509 RAD51B 0 . . . 6.57 83.69 14 5.1 No 10 0.45 No 0 0 No -24 0.57 No 48 95.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68587093 + NM_133509 RAD51B 0 . . . 3.9 73.68 17 6.93 Yes -2 -1.7 No 0 0 No -16 0.4 No 33 86.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52438202 - NM_004656 BAP1 0 . . . 0.02 75.19 14 4.36 No 18 -2.81 No 0 0 No -16 0.72 Yes 52 32.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29138622 - NM_001005735 CHEK2 0 . . . 13.77 82.91 28 6.05 Yes 26 0.96 Yes 0 0 No -27 0.7 Yes 32 70.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89622803 + NM_000314 PTEN 0 . . . 6.27 94.52 16 4.69 No NA NA NA 0 0 No -41 0.54 No 44 42.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90986041 - NM_002485 NBN 0 . . . 2.47 77.76 18 4.9 No 45 0.29 No 0 0 No -25 0.68 Yes 47 71.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59876029 - NM_032043 BRIP1 0 . . . 0.55 61.12 23 4.8 No 28 -3.83 No 0 0 No -53 0.7 Yes 46 72.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68499062 + NM_133509 RAD51B 0 . . . 7.19 81.23 39 7.02 Yes 70 1.43 Yes 0 0 No -26 0.77 Yes 40 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59909227 - NM_032043 BRIP1 0 . . . 2.12 0 36 6.08 Yes 70 0.25 No 0 0 No -30 0.58 No 49 50.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47628964 + NM_000251 MSH2 0 . . . 1.12 75.18 46 5.85 Yes 33 1.13 Yes 0 0 No -31 0.42 No 15 59.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68358724 + NM_133509 RAD51B 0 . . . 3.46 72.31 11 5.2 No 70 -5.08 No 0 0 No -20 0.53 No 44 61.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41224238 - NM_007294 BRCA1 0 . . . 3.25 80.12 25 5.1 No 8 1.2 Yes 0 0 No -24 0.73 Yes 50 87.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47656674 + NM_000251 MSH2 0 . . . 2.54 80.34 40 5.38 No 32 1.19 Yes 0 0 No -21 0.8 Yes 26 55.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48017533 + NM_000179 MSH6 0 . . . 3.19 0 35 5.83 Yes 6 0.97 Yes 0 0 No -32 0.46 No 52 92.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68489167 + NM_133509 RAD51B 0 . . . 2.47 0 35 6.35 Yes 16 0.62 No 0 0 No -34 0.78 Yes 46 57.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68571544 + NM_133509 RAD51B 0 . . . 6.08 93.49 17 5.29 No 18 0.74 No 0 0 No -25 0.67 Yes 40 74.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47793689 + NM_000251 MSH2 0 . . . 9.34 85.1 21 9.64 Yes 57 1.04 Yes 0 0 No -35 0.33 No 47 72.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131958860 + NM_005732 RAD50 0 . . . 2.67 64.93 24 5.39 No 53 1.62 Yes 0 0 No -23 0.8 Yes 17 73.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32925370 + NM_000059 BRCA2 0 . . . 2.96 70.17 26 6.65 Yes -3 0.84 Yes 0 0 No -25 0.85 Yes 55 31.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94222635 - NM_005591 MRE11 0 . . . 2.92 58.53 24 5.34 No 3 -2.4 No 0 0 No -26 0.73 Yes 48 60.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6011091 - NM_000535 PMS2 0 . . . 4.55 77.18 24 4.89 No 2 0.36 No 0 0 No -23 0.87 Yes 46 68.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84393477 - NM_139076 FAM175A 0 . . . 5.67 77.5 16 5.05 No 10 0.81 Yes 27 0.4 Yes -24 0.41 No 48 92.14 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 190649284 + NM_000534 PMS1 0 . . . 2.76 66.48 28 5.52 No 11 -1.34 No 0 0 No -27 0.58 No 47 60 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69025659 + NM_133509 RAD51B 0 . . . 2.5 66.44 31 8.3 Yes 8 1.37 Yes 0 0 No -30 0.66 Yes 50 87.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68741244 + NM_133509 RAD51B 0 . . . 6.91 74.44 24 4.66 No 0 0.46 No 0 0 No -23 0.86 Yes 47 28.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152359590 - NM_005431 XRCC2 0 . . . 6.98 84.12 20 6 Yes 34 1.16 Yes 0 0 No -19 0.4 No 42 92.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94180802 - NM_005591 MRE11 0 . . . 3.9 82.27 12 5 No 43 1.66 Yes 0 0 No -25 0.5 No 15 93.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68660586 + NM_133509 RAD51B 0 . . . 4.66 83.69 41 6.48 Yes 36 0.95 Yes 0 0 No -40 0.59 No 43 46.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68717487 + NM_133509 RAD51B 0 . . . 2.99 72.58 17 4.47 No 45 1.01 Yes 0 0 No -40 0.68 Yes 51 70.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68848009 + NM_133509 RAD51B 0 . . . 6.86 77.71 34 7.22 Yes 58 1.33 Yes 0 0 No -30 0.36 No 39 91.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41259911 - NM_007294 BRCA1 0 . . . 4.87 76.44 35 4.98 No 72 0.94 Yes 0 0 No -29 0.54 No 37 96.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59907425 - NM_032043 BRIP1 0 . . . 0.59 74.68 17 5.74 Yes 38 -4.01 No 0 0 No -16 0.32 No 36 46.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68571729 + NM_133509 RAD51B 0 . . . 2.54 80.53 25 5.39 No 69 0.15 No 0 0 No -24 0.62 No 50 40.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59940738 - NM_032043 BRIP1 0 . . . 13.67 97.46 17 4.8 No NA NA NA 0 0 No -40 0.5 No 49 42.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68784818 + NM_004360 CDH1 0 . . . 2.98 77.45 21 5.68 Yes 34 1.03 Yes 0 0 No -20 0.51 No 24 87.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190659901 + NM_000534 PMS1 0 . . . 1.18 0 64 7.52 Yes 22 0.71 No 0 0 No -26 0.53 No 54 51.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68776587 + NM_004360 CDH1 0 . . . 2.95 70.85 20 4.8 No 13 0.84 Yes 0 0 No -41 0.44 No 45 85.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190691747 + NM_000534 PMS1 0 . . . 4.37 65.89 15 5.39 No 14 0.51 No 0 0 No -26 0.89 Yes 44 84.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68658374 + NM_133509 RAD51B 0 . . . 0.06 0 30 8.93 Yes 53 0.35 No 0 0 No -29 0.74 Yes 59 78.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131948491 + NM_005732 RAD50 0 . . . 0.85 76.63 21 4.57 No 67 -4.95 No 0 0 No -20 0.82 Yes 50 60.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68548722 + NM_133509 RAD51B 0 . . . 3.75 84.95 22 3.42 No 49 1.21 Yes 0 0 No -24 0.71 Yes 11 46.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94164390 - NM_005591 MRE11 0 . . . 11.63 78.96 43 5.36 No 56 1.65 Yes 0 0 No -24 0.78 Yes 44 88.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68825455 + NM_133509 RAD51B 0 . . . 1.13 69.78 38 6.16 Yes 56 -4.81 No 0 0 No -25 0.65 No 43 57.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59863453 - NM_032043 BRIP1 0 . . . 2.89 76.04 40 7.05 Yes 26 0.87 Yes 0 0 No -27 0.77 Yes 56 30.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89649649 + NM_000314 PTEN 0 . . . 4.54 71 10 4.69 No 38 1.48 Yes 0 0 No -17 0.56 No 48 47.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69049383 + NM_133509 RAD51B 0 . . . 2.03 72.54 29 6.81 Yes 23 0.66 No 0 0 No -28 0.83 Yes 35 64.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21984983 - NM_000077 CDKN2A 0 . . . 0.95 71.92 28 5.29 No 61 0.21 No 0 0 No -27 0.79 Yes 47 50.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45798695 - NM_001048171 MUTYH 0 . . . 1.94 59.28 35 7.91 Yes 59 -1.8 No 0 0 No -34 0.65 No 45 71.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68669380 + NM_133509 RAD51B 0 . . . 6.99 81.38 27 5.26 No 5 -0.47 No 0 0 No -26 0.75 Yes 44 63.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69076830 + NM_133509 RAD51B 0 . . . 2.43 0 82 8.93 Yes 69 0.64 No 0 0 No -23 0.91 Yes 27 30.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59871713 - NM_032043 BRIP1 0 . . . 4.75 71.13 36 6.77 Yes 51 0.5 No 0 0 No -35 0.79 Yes 38 72.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94174615 - NM_005591 MRE11 0 . . . 3.05 73.1 14 4.47 No 41 1.74 Yes 0 0 No -26 0.61 No 21 78.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68517801 + NM_133509 RAD51B 0 . . . 2.22 68.67 38 5.8 Yes 5 0.71 No 0 0 No -19 0.57 No 45 31.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68930545 + NM_133509 RAD51B 0 . . . 4.12 72.93 23 6.57 Yes 34 2.49 Yes 0 0 No -22 0.71 Yes 24 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59889405 - NM_032043 BRIP1 0 . . . 2.99 78.85 21 3.8 No 6 0.44 No 0 0 No -20 0.68 Yes 47 81.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94203315 - NM_005591 MRE11 0 . . . 1.82 76.36 31 5.4 No 23 0.67 No 0 0 No -30 0.91 Yes 40 49.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68881489 + NM_133509 RAD51B 0 . . . 0.32 74.68 30 4.94 No 76 0.48 No 0 0 No -29 0.42 No 54 73.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45801540 - NM_001048171 MUTYH 0 . . . 1.06 0 22 5.91 Yes 17 -2.7 No 0 0 No -21 0.95 Yes 41 33.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90962382 - NM_002485 NBN 0 . . . 0.7 72.65 71 5.77 Yes -2 0.43 No 0 0 No -25 0.5 No 46 49.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41257303 - NM_007294 BRCA1 0 . . . 1.17 61.05 30 5.56 Yes 40 -3.51 No 0 0 No -29 0.3 No 39 53.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68831260 + NM_004360 CDH1 0 . . . 3.78 69.25 29 6.24 Yes 59 -4.98 No 0 0 No -28 0.77 Yes 46 79.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59927996 - NM_032043 BRIP1 0 . . . 2.79 79.24 29 6.63 Yes 33 1.01 Yes 0 0 No -28 0.93 Yes 40 72.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94227264 - NM_005591 MRE11 0 . . . 3.11 72.46 18 4.58 No 39 1.18 Yes 0 0 No -23 0.56 No 19 23.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32968723 + NM_000059 BRCA2 0 . . . 5.52 77.5 27 5.74 Yes 6 0.45 No 0 0 No -26 0.36 No 42 84.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32895210 + NM_000059 BRCA2 0 . . . 0.62 75.79 17 6.13 Yes -4 0.13 No 0 0 No -6 0.34 No 49 54.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68993071 + NM_133509 RAD51B 0 . . . 0.29 74.81 22 5.07 No 61 0.12 No 0 0 No -21 0.71 Yes 51 55.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68406811 + NM_133509 RAD51B 0 . . . 4.74 84.41 34 5.91 Yes 67 -1.07 No 0 0 No -31 0.71 Yes 27 43.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68585485 + NM_133509 RAD51B 0 . . . 5.46 73.22 22 4.1 No 66 0.95 Yes 0 0 No -21 0.84 Yes 43 84.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40989243 + NM_001164269 RAD51 0 . . . 5.79 75.17 15 5.39 No 28 1.31 Yes 0 0 No -28 0.26 No 30 61.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105204891 + NM_021930 RINT1 0 . . . 5.79 66.29 34 5.81 Yes 22 0.04 No 0 0 No -27 0.62 No 41 73.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68911041 + NM_133509 RAD51B 0 . . . 4.16 0 22 5.38 No 36 0.9 Yes 0 0 No -27 0.64 No 54 64.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68974364 + NM_133509 RAD51B 0 . . . 5.96 88.31 36 5.88 Yes 25 0.54 No 0 0 No -19 0.39 No 48 57.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131902262 + NM_005732 RAD50 0 . . . 6.24 82.06 19 5.95 Yes 1 0.93 Yes 0 0 No -29 0.94 Yes 27 63.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68838902 + NM_133509 RAD51B 0 . . . 5.52 79.36 20 4.7 No 5 0.15 No 0 0 No -32 0.45 No 46 77.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47668152 + NM_000251 MSH2 0 . . . 2.69 79 18 5.83 Yes 19 -3.35 No 0 0 No -27 0.65 No 23 32.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68693357 + NM_133509 RAD51B 0 . . . 7.2 75.69 28 5.57 Yes 25 1.25 Yes 0 0 No -27 0.92 Yes 33 84.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21977194 - NM_000077 CDKN2A 0 . . . 5.28 80.47 35 6.07 Yes 44 0.5 No 0 0 No -34 0.44 No 33 84.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68944149 + NM_133509 RAD51B 0 . . . 7.65 82.41 17 5.57 Yes 32 1.27 Yes 0 0 No -16 0.55 No 45 77.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108158574 + NM_000051 ATM 0 . . . 3.28 71.33 26 5.13 No 53 0.71 No 0 0 No -25 0.82 Yes 39 70.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68405568 + NM_133509 RAD51B 0 . . . 1.49 0 29 6.28 Yes 26 0.79 Yes 0 0 No -28 0.92 Yes 32 66.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68689740 + NM_133509 RAD51B 0 . . . 3.26 65.45 57 8.69 Yes 74 1.55 Yes 0 0 No -56 0.78 Yes 46 34.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68890939 + NM_133509 RAD51B 0 . . . 5.04 76.47 29 6.08 Yes 20 0.82 Yes 0 0 No -28 0.58 No 38 44.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105205820 + NM_021930 RINT1 0 . . . 0.81 79.46 55 6.94 Yes 12 1.54 Yes 0 0 No -27 0.7 Yes 51 51.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131906509 + NM_005732 RAD50 0 . . . 4.66 73.51 28 5.74 Yes 41 0.89 Yes 0 0 No -28 0.83 Yes 40 81.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7585738 - NM_000546 TP53 0 . . . 0.12 66.99 31 5.63 Yes 65 -3.5 No 0 0 No -20 0.37 No 51 39.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59757531 - NM_032043 BRIP1 0 . . . 1.69 0 19 4.7 No 22 1.39 Yes 0 0 No -24 0.75 Yes 36 95.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41026234 + NM_001164269 RAD51 0 . . . 0.88 57.04 30 5.66 Yes 28 1.1 Yes 0 0 No -27 0.83 Yes 34 36.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47634625 + NM_000251 MSH2 0 . . . 2.55 84.41 16 5.47 No 60 -0.47 No 0 0 No -23 0.61 No 47 60.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68539048 + NM_133509 RAD51B 0 . . . 5.51 71.58 27 6.3 Yes 16 -3.12 No 0 0 No -26 0.5 No 46 71.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68476279 + NM_133509 RAD51B 0 . . . 2.01 0 17 4.69 No 12 1.24 Yes 0 0 No -16 0.38 No 42 72.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68374457 + NM_133509 RAD51B 0 . . . 7.14 81.67 21 5.07 No 37 0.11 No 0 0 No -20 0.64 No 40 95.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90982016 - NM_002485 NBN 0 . . . 3.6 85.02 26 6.67 Yes 4 1.05 Yes 0 0 No -25 0.77 Yes 54 66.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59799540 - NM_032043 BRIP1 0 . . . 3.02 67.29 25 4.89 No 57 1.27 Yes 0 0 No -25 0.39 No 42 57.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215645421 - NM_000465 BARD1 0 . . . 3.7 0 26 4.25 No 74 0.74 No 0 0 No -46 0.63 No 54 60.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75482566 - NM_001040108 MLH3 0 . . . 7.86 93.83 15 5.74 Yes 49 0.78 Yes 27 0.7 Yes -26 0.76 Yes 38 44.45 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 190706451 + NM_000534 PMS1 0 . . . 7.27 80.8 37 5.91 Yes 64 -0.75 No 0 0 No -36 0.78 Yes 26 56.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59898685 - NM_032043 BRIP1 0 . . . 7.18 76.01 17 5.87 Yes 64 1.55 Yes 0 0 No -31 0.61 No 42 76.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69020646 + NM_133509 RAD51B 0 . . . 6.45 75.96 14 4.76 No 16 0.35 No 0 0 No -22 0.89 Yes 42 67.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68634946 + NM_133509 RAD51B 0 . . . 0.02 63.44 17 5.46 No 47 0.78 Yes 0 0 No -34 0.68 Yes 52 65.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108182717 + NM_000051 ATM 0 . . . 6.07 78.92 31 6.19 Yes 8 1.59 Yes 0 0 No -30 0.67 Yes 50 58.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215639495 - NM_000465 BARD1 0 . . . 0.08 64.19 34 4 No -4 0.48 No 0 0 No -33 0.71 Yes 45 32.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21980857 - NM_000077 CDKN2A 0 . . . 6.53 85.87 15 5.01 No 8 1.22 Yes 0 0 No -28 0.89 Yes 50 93.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215597610 - NM_000465 BARD1 0 . . . 7.23 80.75 20 7.14 Yes 56 0.76 No 0 0 No -19 0.74 Yes 41 90.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59900686 - NM_032043 BRIP1 0 . . . 2.4 70.55 44 6.67 Yes 71 0.84 Yes 0 0 No -25 0.3 No 44 69.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68762374 + NM_133509 RAD51B 0 . . . 4.12 75.5 20 5.48 No 74 -3.68 No 0 0 No -19 0.68 Yes 23 34.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47721866 + NM_000251 MSH2 0 . . . 6.9 82.1 29 5.46 No NA NA NA 0 0 No -34 0.72 Yes 46 72.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59850831 - NM_032043 BRIP1 0 . . . 4.35 70.73 16 4.68 No 29 0.11 No 0 0 No -36 0.78 Yes 41 68.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131928264 + NM_005732 RAD50 0 . . . 2.56 64.34 37 6.1 Yes 1 0.89 Yes 0 0 No -36 0.94 Yes 31 53.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47664342 + NM_000251 MSH2 0 . . . 0.68 66.46 19 5.56 Yes -4 1.1 Yes 0 0 No -18 0.63 No 40 67.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56800248 + NM_058216 RAD51C 0 . . . 4.04 0 17 4.76 No 47 1.55 Yes 0 0 No -22 0.44 No 11 58.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190703622 + NM_000534 PMS1 0 . . . 0.1 0 26 6.41 Yes 14 -3.06 No 0 0 No -25 0.94 Yes 55 43.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68523436 + NM_133509 RAD51B 0 . . . 0.27 73.84 25 4.43 No 57 -3.81 No 0 0 No -24 0.78 Yes 53 54.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68918737 + NM_133509 RAD51B 0 . . . 6.58 77.75 28 4.93 No -2 0.78 Yes 0 0 No -31 0.61 No 43 66.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6024389 - NM_000535 PMS2 0 . . . 3.98 89.42 38 6.2 Yes 2 1.56 Yes 0 0 No -27 0.71 Yes 22 41.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68643225 + NM_133509 RAD51B 0 . . . 2.22 82.66 29 6.8 Yes 13 0.25 No 0 0 No -28 0.89 Yes 51 76.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69085205 + NM_133509 RAD51B 0 . . . 7.08 79.52 22 5.29 No 20 1.85 Yes 0 0 No -21 0.76 Yes 38 89.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68393068 + NM_133509 RAD51B 0 . . . 0.64 0 11 4.12 No 73 0.01 No 0 0 No -35 0.64 No 40 51.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108205354 + NM_000051 ATM 0 . . . 6.38 81.86 21 5.74 Yes 4 1.51 Yes 0 0 No -20 0.91 Yes 41 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59764007 - NM_032043 BRIP1 0 . . . 2.25 73.67 20 4.2 No 43 0.27 No 0 0 No -23 0.74 Yes 45 77.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89665988 + NM_000314 PTEN 0 . . . 1.34 0 24 4.29 No 35 0.29 No 0 0 No -24 0.57 No 48 95.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68670694 + NM_133509 RAD51B 0 . . . 6.11 79.04 49 6.82 Yes 49 0.39 No 0 0 No -18 0.37 No 38 93.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105174339 + NM_021930 RINT1 0 . . . 0.17 72.17 89 10.01 Yes 33 1.09 Yes 0 0 No -33 0.93 Yes 25 25.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68391875 + NM_133509 RAD51B 0 . . . 4.41 71.78 26 5.65 Yes 50 1.2 Yes 0 0 No -21 0.84 Yes 37 71.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68760482 + NM_133509 RAD51B 0 . . . 0.47 66.83 17 3.84 No 35 1.07 Yes 0 0 No -22 0.81 Yes 23 95.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47763021 + NM_000251 MSH2 0 . . . 0.61 65.62 16 6.7 Yes 14 0.82 Yes 0 0 No -33 0.75 Yes 32 54.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68837751 + NM_004360 CDH1 0 . . . 2.15 79.34 31 6 Yes 59 -3.74 No 0 0 No -30 0.9 Yes 48 52.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68592903 + NM_133509 RAD51B 0 . . . 5.08 84.18 23 5.83 Yes 5 1.04 Yes 0 0 No -22 0.74 Yes 37 72.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69134839 + NM_133509 RAD51B 0 . . . 5.33 70.83 27 5.47 No 24 0.04 No 0 0 No -26 0.96 Yes 48 40.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89663589 + NM_000314 PTEN 0 . . . 6.02 78.54 11 5.57 Yes 68 0.29 No 0 0 No -54 0.58 No 46 52.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94224388 - NM_005591 MRE11 0 . . . 0.53 67.73 48 9.36 Yes 66 0.45 No 0 0 No -21 0.39 No 42 65.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89702138 + NM_000314 PTEN 0 . . . 0.9 75.43 17 3.61 No 7 0.29 No 0 0 No -22 0.63 No 51 70.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37073391 + NM_000249 MLH1 0 . . . 0.11 0 26 5.1 No 35 0.87 Yes 0 0 No -25 0.89 Yes 56 35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90995838 - NM_002485 NBN 0 . . . 2.88 77.03 19 5 No 23 1.49 Yes 0 0 No -18 0.55 No 49 89.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68657088 + NM_133509 RAD51B 0 . . . 2.73 72.91 18 5.23 No 38 0.82 Yes 0 0 No -48 0.54 No 41 93.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37073304 + NM_000249 MLH1 0 . . . 1.02 72.26 31 4.98 No 12 1.1 Yes 0 0 No -25 0.35 No 46 74.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68925573 + NM_133509 RAD51B 0 . . . 7.53 83.72 34 6.32 Yes 34 0.71 No 0 0 No -34 0.57 No 45 71.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68414506 + NM_133509 RAD51B 0 . . . 1.12 73.63 22 5.27 No -4 0.88 Yes 0 0 No -26 0.86 Yes 43 71.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32961036 + NM_000059 BRCA2 0 . . . 6.33 89.97 13 5 No 63 1.22 Yes 0 0 No -44 0.66 No 47 42.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131970553 + NM_005732 RAD50 0 . . . 4.47 87.47 21 6 Yes 23 0.62 No 0 0 No -23 0.5 No 47 81.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1230220 + NM_000455 STK11 0 . . . 4.96 76.54 25 4.89 No 45 -0.81 No 0 0 No -24 0.57 No 25 46.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90985497 - NM_002485 NBN 0 . . . 2.77 68.49 16 5.45 No 28 0.22 No 0 0 No -25 0.6 No 40 91.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37079670 + NM_000249 MLH1 0 . . . 4.54 83.35 23 4.7 No 75 1.25 Yes 0 0 No -22 0.62 No 37 57.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59763668 - NM_032043 BRIP1 0 . . . 4.4 80.48 19 4.72 No -4 0.24 No 0 0 No -18 0.62 No 45 50.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190725568 + NM_000534 PMS1 0 . . . 6.26 88.76 45 5.14 No 53 1.1 Yes 0 0 No -31 0.44 No 23 78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68464647 + NM_133509 RAD51B 0 . . . 2.92 70.31 31 6.56 Yes 42 0.87 Yes 0 0 No -39 0.56 No 28 48.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41255980 - NM_007294 BRCA1 0 . . . 1.29 75.2 13 5.27 No 33 -2.76 No 0 0 No -29 0.6 No 49 65.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402672 + NM_133509 RAD51B 0 . . . 4.91 77.66 40 6.79 Yes 37 -1.9 No 0 0 No -24 0.65 No 48 56.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68594981 + NM_133509 RAD51B 0 . . . 3.32 0 49 6.62 Yes 18 1.08 Yes 0 0 No -43 0.58 No 39 83.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89715548 + NM_000314 PTEN 0 . . . 7.03 69.77 22 4.69 No 39 -3.65 No 0 0 No -55 0.6 No 51 36.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68927477 + NM_133509 RAD51B 0 . . . 1.97 67.14 17 4.8 No -3 0.13 No 0 0 No -16 0.43 No 50 24.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59830660 - NM_032043 BRIP1 0 . . . 7.84 80.3 29 7.35 Yes 76 0.94 Yes 0 0 No -28 0.97 Yes 44 69.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68414178 + NM_133509 RAD51B 0 . . . 6.87 77.03 21 5.2 No 3 0.43 No 0 0 No -20 0.74 Yes 40 50.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131964698 + NM_005732 RAD50 0 . . . 2.76 74.06 19 5.73 Yes 50 -2.67 No 0 0 No -23 0.32 No 34 77.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68421926 + NM_133509 RAD51B 0 . . . 1.47 83.19 27 5.26 No 49 0.63 No 0 0 No -22 0.44 No 47 55.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6044340 - NM_000535 PMS2 0 . . . 2.78 0 9 3.87 No 30 1.29 Yes 0 0 No -30 0.49 No 40 86.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6022234 - NM_000535 PMS2 0 . . . 0.66 74.23 37 4.57 No 4 0.19 No 0 0 No -27 0.53 No 54 83.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108121064 + NM_000051 ATM 0 . . . 2.24 80.12 31 5.11 No 7 1.16 Yes 0 0 No -21 0.65 No 51 87.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69121888 + NM_133509 RAD51B 0 . . . 0.27 0 19 4.69 No 30 0.58 No 0 0 No -23 0.3 No 28 93.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75484980 - NM_001040108 MLH3 0 . . . 0.58 71.83 47 5.79 Yes 75 -2.47 No 0 0 No -33 0.42 No 40 21.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40986177 + NM_001164269 RAD51 0 . . . 3.18 75.52 49 6.84 Yes 60 1.52 Yes 0 0 No -24 0.75 Yes 48 46.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68531121 + NM_133509 RAD51B 0 . . . 7.37 81.84 29 6 Yes 41 1.55 Yes 0 0 No -28 0.81 Yes 40 60.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59811548 - NM_032043 BRIP1 0 . . . 4.95 79.03 15 5.1 No 30 0.45 No 0 0 No -21 0.33 No 46 46.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47700221 + NM_000251 MSH2 0 . . . 3.97 78.28 21 4.45 No 9 1.13 Yes 0 0 No -30 0.31 No 49 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68933573 + NM_133509 RAD51B 0 . . . 1.3 0 28 4.63 No 47 -4.67 No 0 0 No -30 0.65 No 45 26.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29103453 - NM_001005735 CHEK2 0 . . . 0.76 0 23 5.2 No 37 0.53 No 0 0 No -22 0.75 Yes 52 80.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108144113 + NM_000051 ATM 0 . . . 6.48 89.22 14 5.92 Yes 52 1.37 Yes 0 0 No -26 0.56 No 11 87.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94203521 - NM_005591 MRE11 0 . . . 2.63 70.55 16 5.04 No 5 0.33 No 0 0 No -44 0.72 Yes 47 63.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68667533 + NM_133509 RAD51B 0 . . . 1.34 63.56 21 7.21 Yes 47 0.82 Yes 0 0 No -20 0.79 Yes 46 63.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89698207 + NM_000314 PTEN 0 . . . 4.63 76.9 25 5.19 No 45 1.06 Yes 0 0 No -24 0.72 Yes 48 66.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94152464 - NM_005591 MRE11 0 . . . 0.19 78.41 24 4.94 No 16 -3.24 No 0 0 No -23 0.73 Yes 55 48.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69080265 + NM_133509 RAD51B 0 . . . 4.83 90.8 30 6.32 Yes 52 1.46 Yes 0 0 No -35 0.66 No 49 94.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47701051 + NM_000251 MSH2 0 . . . 6.84 83.28 58 7.5 Yes 8 0.83 Yes 0 0 No -30 0.79 Yes 45 60.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108094508 + NM_000051 ATM 0 . . . 0.7 72.37 29 6.24 Yes 11 1.21 Yes 0 0 No -28 0.61 No 47 89.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37073949 + NM_000249 MLH1 0 . . . 6.23 78.72 37 6.3 Yes 47 1.57 Yes 0 0 No -24 0.9 Yes 40 72.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69018520 + NM_133509 RAD51B 0 . . . 1.4 0 12 5.74 Yes 38 0.77 Yes 0 0 No -28 0.55 No 13 68.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68867636 + NM_133509 RAD51B 0 . . . 5.55 78.09 27 3.81 No 21 0.27 No 0 0 No -27 0.44 No 44 79.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68934999 + NM_133509 RAD51B 0 . . . 1.56 74.96 15 4.41 No 66 1.2 Yes 0 0 No -28 0.68 Yes 51 68.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215634299 - NM_000465 BARD1 0 . . . 0.69 80.12 15 3.59 No 68 0.7 No 0 0 No -34 0.46 No 48 73.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41005467 + NM_001164269 RAD51 0 . . . 5.11 84.41 20 7.14 Yes 48 1.54 Yes 0 0 No -19 0.71 Yes 39 94.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68817414 + NM_004360 CDH1 0 . . . 3.15 76.52 20 4.92 No 9 0.74 No 0 0 No -29 0.37 No 49 62.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89658374 + NM_000314 PTEN 0 . . . 1.2 74.94 46 6.63 Yes 64 0.68 No 0 0 No -20 0.81 Yes 38 80.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89666008 + NM_000314 PTEN 0 . . . 5.37 72.36 16 5.19 No 55 0.29 No 0 0 No -28 0.86 Yes 48 64.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68773783 + NM_133509 RAD51B 0 . . . 5.2 79.41 29 5.97 Yes 48 0.95 Yes 0 0 No -28 0.8 Yes 41 67.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68743848 + NM_133509 RAD51B 0 . . . 8.85 78.41 23 7.69 Yes 5 1.48 Yes 0 0 No -22 0.5 No 53 64.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69081479 + NM_133509 RAD51B 0 . . . 5.77 81.08 70 8.36 Yes 16 0.3 No 0 0 No -34 0.35 No 43 48.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108159951 + NM_000051 ATM 0 . . . 5.14 66.37 21 5 No 63 -4.21 No 0 0 No -20 0.73 Yes 40 36.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190689071 + NM_000534 PMS1 0 . . . 2.91 81.2 27 4.32 No 8 0.85 Yes 0 0 No -26 0.92 Yes 50 91.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47639383 + NM_000251 MSH2 0 . . . 0.73 56.86 16 4.47 No 13 0.38 No 0 0 No -31 0.69 Yes 39 67.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47673980 + NM_000251 MSH2 0 . . . 1.62 76.85 17 4.69 No 76 1.5 Yes 0 0 No -19 0.43 No 25 44.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215648640 - NM_000465 BARD1 0 . . . 3.21 0 25 5.8 Yes 15 0.24 No 0 0 No -24 0.78 Yes 49 50.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59776860 - NM_032043 BRIP1 0 . . . 4.5 75.27 31 5.69 Yes 76 -2.12 No 0 0 No -30 0.43 No 48 81.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69016805 + NM_133509 RAD51B 0 . . . 2.52 0 12 3.86 No 4 1.7 Yes 0 0 No -52 0.65 No 38 78.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131933858 + NM_005732 RAD50 0 . . . 0.28 80.91 28 4.44 No 33 1.19 Yes 0 0 No -27 0.94 Yes 25 71.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59900282 - NM_032043 BRIP1 0 . . . 5.77 76.58 21 4.51 No 11 0.81 Yes 0 0 No -19 0.52 No 47 76.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94223928 - NM_005591 MRE11 0 . . . 4.59 80.02 35 6.4 Yes 11 0.75 No 0 0 No -34 0.43 No 47 94.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68569918 + NM_133509 RAD51B 0 . . . 0.12 0 24 7.05 Yes 73 -4.26 No 0 0 No -23 0.75 Yes 46 52.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68797174 + NM_004360 CDH1 0 . . . 3.5 70.27 22 5.73 Yes 63 -0.98 No 0 0 No -21 0.48 No 47 75.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59872062 - NM_032043 BRIP1 0 . . . 8.44 82.49 21 5.2 No 14 1.14 Yes 0 0 No -29 0.73 Yes 44 42.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32953682 + NM_000059 BRCA2 0 . . . 6.43 90.47 26 5.18 No 7 0.54 No 0 0 No -25 0.84 Yes 46 76.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32928554 + NM_000059 BRCA2 0 . . . 0.82 56.74 43 6.35 Yes 65 -3.97 No 0 0 No -42 0.62 No 61 43.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47652648 + NM_000251 MSH2 0 . . . 8.96 84.45 25 4.64 No 59 -4.32 No 0 0 No -47 0.93 Yes 48 47.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68880248 + NM_133509 RAD51B 0 . . . 0.44 70.08 24 4.99 No 52 0.28 No 0 0 No -23 0.33 No 42 22.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68791515 + NM_004360 CDH1 0 . . . 7.04 84.4 21 5 No 15 0.74 No 0 0 No -20 0.91 Yes 43 73.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68399392 + NM_133509 RAD51B 0 . . . 2.51 69.56 18 5.74 Yes 73 0.02 No 0 0 No -32 0.29 No 42 53.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131894610 + NM_005732 RAD50 0 . . . 2.26 60.27 13 4.98 No 12 0.25 No 0 0 No -20 0.5 No 46 53.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68777204 + NM_133509 RAD51B 0 . . . 1.84 75.4 26 5.29 No 66 -5.71 No 0 0 No -25 0.7 Yes 45 60 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68629678 + NM_133509 RAD51B 0 . . . 5.62 67.42 18 4.9 No 45 0.21 No 0 0 No -39 0.58 No 44 51.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47655056 + NM_000251 MSH2 0 . . . 4.29 0 25 6.08 Yes -3 0.25 No 0 0 No -24 0.66 No 50 65.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32954199 + NM_000059 BRCA2 0 . . . 2.19 82.33 38 6.93 Yes 67 0.66 No 0 0 No -12 0.31 No 46 67.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45795075 - NM_001048171 MUTYH 0 . . . 7.41 84.71 12 4.9 No 27 -0.87 No 0 0 No -25 0.53 No 51 46.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68827234 + NM_004360 CDH1 0 . . . 0.72 71.01 16 5.48 No 57 -1.99 No 0 0 No -23 0.38 No 47 68.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75519609 - NM_001040108 MLH3 0 . . . 1.67 72.32 33 6.66 Yes 19 1.14 Yes 0 0 No -33 0.63 No 39 61.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68520502 + NM_133509 RAD51B 0 . . . 0.65 0 20 6.1 Yes 26 0.5 No 0 0 No -19 0.7 Yes 50 36.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29137013 - NM_001005735 CHEK2 0 . . . 0.91 73.12 32 4.24 No 57 1.12 Yes 0 0 No -31 0.37 No 53 69.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94199337 - NM_005591 MRE11 0 . . . 0.41 51.16 18 5.11 No 43 1.16 Yes 0 0 No -26 0.75 Yes 46 41.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69082014 + NM_133509 RAD51B 0 . . . 0.96 66.68 32 5.74 Yes 49 1.1 Yes 0 0 No -28 0.44 No 36 62.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75488600 - NM_001040108 MLH3 0 . . . 4.62 64.76 23 5.21 No 15 0.82 Yes 0 0 No -30 0.64 No 43 87.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68313408 + NM_133509 RAD51B 0 . . . 3.82 82.58 17 6.47 Yes 75 -5.03 No 0 0 No -24 0.44 No 49 73.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94199505 - NM_005591 MRE11 0 . . . 3.3 80 26 5.06 No 37 1.02 Yes 0 0 No -25 0.86 Yes 21 42.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108205561 + NM_000051 ATM 0 . . . 0.72 63.32 62 5.38 No 60 -5.37 No 0 0 No -28 0.65 No 42 32.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32936150 + NM_000059 BRCA2 0 . . . 2.49 69.28 29 5.48 No -3 0.67 No 0 0 No -28 0.91 Yes 42 54.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90981404 - NM_002485 NBN 0 . . . 1.8 72.9 29 4.69 No 74 0.52 No 0 0 No -28 0.82 Yes 45 83.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59900505 - NM_032043 BRIP1 0 . . . 1.9 73.31 20 4.36 No 27 -1.68 No 0 0 No -34 0.7 Yes 42 86.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41230790 - NM_007294 BRCA1 0 . . . 6.79 87 37 6.2 Yes 28 0.56 No 0 0 No -11 0.17 No 42 85.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47654803 + NM_000251 MSH2 0 . . . 2.1 71.42 16 4.69 No 47 0.97 Yes 0 0 No -31 0.36 No 52 23.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89662603 + NM_000314 PTEN 0 . . . 0.39 66.05 24 5.39 No 23 1.53 Yes 0 0 No -24 0.8 Yes 43 54.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68491654 + NM_133509 RAD51B 0 . . . 0.02 0 15 3.56 No 69 -1.84 No 0 0 No -54 0.33 No 44 76.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32896736 + NM_000059 BRCA2 0 . . . 3.99 67.57 40 5.76 Yes 15 0.35 No 0 0 No -34 0.48 No 43 77.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68658778 + NM_133509 RAD51B 0 . . . 0.7 60.44 60 8.96 Yes 10 1.69 Yes 0 0 No -22 0.34 No 48 64.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59938969 - NM_032043 BRIP1 0 . . . 4.86 85.5 26 5.66 Yes 48 0.95 Yes 29 0.87 Yes -25 0.75 Yes 41 91.81 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 104166843 - NM_001100119 XRCC3 0 . . . 1.88 77.58 16 4 No 8 0.07 No 0 0 No -27 0.82 Yes 53 80.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48028528 + NM_000179 MSH6 0 . . . 2.3 84.41 16 5.57 Yes 18 0.54 No 0 0 No -28 0.49 No 40 95.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68779276 + NM_004360 CDH1 0 . . . 1.27 63.42 11 4.12 No 35 -4.26 No 0 0 No -50 0.34 No 36 55.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68551139 + NM_133509 RAD51B 0 . . . 8.3 82.07 17 4.58 No 24 0.31 No 0 0 No -16 0.69 Yes 44 78.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6045837 - NM_000535 PMS2 0 . . . 2.95 69.08 15 5.66 Yes 60 -2.66 No 0 0 No -18 0.53 No 40 72.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108210708 + NM_000051 ATM 0 . . . 2.93 63.05 29 4.57 No 35 0.4 No 0 0 No -48 0.54 No 35 51.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47769466 + NM_000251 MSH2 0 . . . 1.02 67.45 21 4.67 No 36 0.02 No 0 0 No -20 0.94 Yes 46 90.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37047229 + NM_000249 MLH1 0 . . . 7.28 86.27 22 6.23 Yes 3 1.07 Yes 0 0 No -21 0.85 Yes 45 56.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59770693 - NM_032043 BRIP1 0 . . . 2.23 70.47 15 4.53 No 50 0.92 Yes 0 0 No -17 0.4 No 45 63.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105172165 + NM_021930 RINT1 0 . . . 2.76 0 23 7.2 Yes 1 0.21 No 0 0 No -26 0.72 Yes 41 77.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152374220 - NM_005431 XRCC2 0 . . . 1.78 65.45 21 5.2 No -3 1.17 Yes 0 0 No -20 0.69 Yes 39 85.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152369836 - NM_005431 XRCC2 0 . . . 1.57 73.07 33 6.17 Yes 31 1.25 Yes 0 0 No -32 0.87 Yes 27 40.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59761668 - NM_032043 BRIP1 0 . . . 1.37 0 14 4.9 No 1 0.37 No 0 0 No -23 0.41 No 45 42.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7588660 - NM_000546 TP53 0 . . . 1.89 0 26 8.89 Yes 41 1.65 Yes 0 0 No -25 0.61 No 41 55.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108100840 + NM_000051 ATM 0 . . . 8.01 70.84 24 5.67 Yes 52 -3.24 No 0 0 No -23 0.7 Yes 43 84.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41214274 - NM_007294 BRCA1 0 . . . 3.1 84.6 14 5.06 No 22 0.29 No 0 0 No -23 0.6 No 36 57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68846875 + NM_133509 RAD51B 0 . . . 3.66 74.91 21 4.95 No 76 0.62 No 0 0 No -28 0.59 No 50 49.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68932833 + NM_133509 RAD51B 0 . . . 1.29 72.72 19 4.69 No 24 0.65 No 0 0 No -18 0.61 No 45 50.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152374690 - NM_005431 XRCC2 0 . . . 0.09 74.68 17 6.47 Yes 4 0.41 No 0 0 No -16 0.72 Yes 54 89.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89726719 + NM_000314 PTEN 0 . . . 2.95 80.29 22 5.44 No 4 0.75 No 0 0 No -21 0.81 Yes 47 36.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68791328 + NM_133509 RAD51B 0 . . . 0.67 64.62 26 4.31 No 50 0.12 No 0 0 No -25 0.85 Yes 30 76.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89711432 + NM_000314 PTEN 0 . . . 3.25 71.54 30 5.52 No 49 1.76 Yes 0 0 No -29 0.56 No 47 64.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108189584 + NM_000051 ATM 0 . . . 1.97 69.81 29 5.9 Yes 56 0.42 No 0 0 No -28 0.7 Yes 50 39.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89683377 + NM_000314 PTEN 0 . . . 7.97 79.61 34 7.6 Yes 2 0.88 Yes 0 0 No -33 0.71 Yes 48 64.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59908391 - NM_032043 BRIP1 0 . . . 7.08 79.34 12 4.44 No 51 0.99 Yes 0 0 No -22 0.76 Yes 45 89.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75490623 - NM_001040108 MLH3 0 . . . 0.35 72.17 21 6.46 Yes 26 0.29 No 0 0 No -24 0.56 No 50 68.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47734639 + NM_000251 MSH2 0 . . . 7.48 78.06 16 4.65 No 65 0.54 No 0 0 No -22 0.77 Yes 37 39.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131945827 + NM_005732 RAD50 0 . . . 9.39 80.63 24 5.88 Yes 46 0.21 No 0 0 No -23 0.89 Yes 38 67.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69059020 + NM_133509 RAD51B 0 . . . 3.6 70.07 28 5.43 No 39 1.1 Yes 0 0 No -27 0.64 No 19 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215607051 - NM_000465 BARD1 0 . . . 7.56 83.68 26 6.04 Yes 63 0.99 Yes 0 0 No -25 0.64 No 43 87.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68291105 + NM_133509 RAD51B 0 . . . 2.99 69.78 21 4.7 No 45 1.23 Yes 0 0 No -24 0.89 Yes 38 68.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131965862 + NM_005732 RAD50 0 . . . 1.24 68.06 28 6.21 Yes 42 1.4 Yes 0 0 No -27 0.69 Yes 42 43.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56768480 + NM_058216 RAD51C 0 . . . 2.98 68.34 17 6.93 Yes 19 0.17 No 0 0 No -25 0.48 No 39 77.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59777978 - NM_032043 BRIP1 0 . . . 0.38 0 17 5.97 Yes 53 -4.36 No 0 0 No -25 0.56 No 52 65.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45801633 - NM_001048171 MUTYH 0 . . . 1.69 0 12 4.67 No 76 0.05 No 0 0 No -58 0.75 Yes 52 42.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47750000 + NM_000251 MSH2 0 . . . 4.83 85.89 35 6.73 Yes 70 -3.25 No 0 0 No -34 0.65 No 52 67.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68859565 + NM_133509 RAD51B 0 . . . 2.07 0 37 7.31 Yes 27 1.57 Yes 0 0 No -20 0.24 No 31 86.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94215286 - NM_005591 MRE11 0 . . . 5.45 77 33 5.67 Yes 24 0.98 Yes 0 0 No -32 0.46 No 38 79.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48011592 + NM_000179 MSH6 0 . . . 7.3 75.22 30 5.66 Yes 1 0.16 No 31 0.85 Yes -25 0.74 Yes 47 56.64 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 108173707 + NM_000051 ATM 0 . . . 6.63 83.73 23 5.2 No 8 1.96 Yes 24 0.36 Yes -22 0.87 Yes 50 89.13 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 47788568 + NM_000251 MSH2 0 . . . 2.08 75.11 19 4.64 No 69 -3.54 No 0 0 No -18 0.9 Yes 52 46.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59790181 - NM_032043 BRIP1 0 . . . 4.36 72.63 19 5.57 Yes 16 1.03 Yes 0 0 No -26 0.43 No 42 91.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215628649 - NM_000465 BARD1 0 . . . 1.11 0 29 5.38 No 49 0.15 No 0 0 No -28 0.54 No 46 37.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183290 - NM_005591 MRE11 0 . . . 0.41 68.63 54 5.8 Yes 48 0.88 Yes 0 0 No -34 0.57 No 51 84.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89677416 + NM_000314 PTEN 0 . . . 7.26 92.96 15 4.58 No 72 2.83 Yes 0 0 No -58 0.41 No 43 67.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68374931 + NM_133509 RAD51B 0 . . . 3.83 80.77 16 5.18 No -3 0.53 No 0 0 No -16 0.4 No 46 58.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69086926 + NM_133509 RAD51B 0 . . . 3.19 81.62 24 5.73 Yes 31 -1.35 No 0 0 No -23 0.65 No 42 90.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190664723 + NM_000534 PMS1 0 . . . 2.91 0 14 5.27 No 74 1.72 Yes 0 0 No -26 0.71 Yes 36 76.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68457948 + NM_133509 RAD51B 0 . . . 3.77 73.24 23 4.8 No -1 0.37 No 0 0 No -18 0.42 No 49 35.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105176205 + NM_021930 RINT1 0 . . . 0.05 0 19 4.58 No 32 1.04 Yes 0 0 No -18 0.73 Yes 36 72.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68867610 + NM_004360 CDH1 0 . . . 6.35 80.49 22 5.29 No 28 0.82 Yes 0 0 No -21 0.49 No 45 54.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48014857 + NM_000179 MSH6 0 . . . 0.13 71.19 18 4.69 No 16 0.73 No 0 0 No -31 0.66 No 42 75.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152357404 - NM_005431 XRCC2 0 . . . 2.17 62.81 21 6.3 Yes 7 -1.01 No 0 0 No -27 0.67 Yes 51 61.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68959654 + NM_133509 RAD51B 0 . . . 5.48 79.13 23 3.9 No 72 0.52 No 0 0 No -22 0.75 Yes 45 59.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69072675 + NM_133509 RAD51B 0 . . . 8.18 89.77 32 6.54 Yes 64 0.87 Yes 0 0 No -31 0.85 Yes 41 56.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32893970 + NM_000059 BRCA2 0 . . . 8.69 89.39 16 4.58 No 7 0.83 Yes 0 0 No -23 0.41 No 48 69.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89622519 + NM_000314 PTEN 0 . . . 7.24 87.58 32 7.07 Yes 5 0.63 No 0 0 No -31 0.84 Yes 53 72.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89655041 + NM_000314 PTEN 0 . . . 2.28 67.48 29 7 Yes -2 0.35 No 0 0 No -37 0.46 No 60 48.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68670620 + NM_133509 RAD51B 0 . . . 3.39 0 23 4.57 No 37 2.07 Yes 0 0 No -21 0.63 No 21 81.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59763798 - NM_032043 BRIP1 0 . . . 2.42 85.21 18 4.7 No 7 0.87 Yes 0 0 No -44 0.52 No 51 92.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59921702 - NM_032043 BRIP1 0 . . . 4.72 78.63 23 5 No 53 1.43 Yes 0 0 No -22 0.88 Yes 47 85.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69122448 + NM_133509 RAD51B 0 . . . 4.7 84.12 26 6.55 Yes 17 -0.81 No 0 0 No -25 0.85 Yes 50 61.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68796126 + NM_004360 CDH1 0 . . . 10.04 93.29 22 5.27 No 44 2.2 Yes 0 0 No -21 0.5 No 38 60.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47788176 + NM_000251 MSH2 0 . . . 4.44 84.15 27 5.2 No 64 -2.77 No 0 0 No -26 0.54 No 55 54.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68813010 + NM_133509 RAD51B 0 . . . 4.37 70.64 12 5.12 No 19 0.64 No 0 0 No -26 0.46 No 51 59.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89691871 + NM_000314 PTEN 0 . . . 7.64 73.62 28 6.42 Yes -2 0.32 No 0 0 No -28 0.54 No 47 57.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190682226 + NM_000534 PMS1 0 . . . 6.63 78.38 42 4.97 No 74 1.03 Yes 0 0 No -26 0.8 Yes 41 67.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68780918 + NM_133509 RAD51B 0 . . . 1.77 74.83 13 4.9 No 21 1.07 Yes 0 0 No -21 0.48 No 37 63.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75509327 - NM_001040108 MLH3 0 . . . 2.69 81.33 26 5.2 No 0 0.25 No 0 0 No -20 0.51 No 50 47.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69077482 + NM_133509 RAD51B 0 . . . 5.27 77.29 19 5.38 No 8 0.45 No 0 0 No -25 0.71 Yes 50 82.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68670266 + NM_133509 RAD51B 0 . . . 0.22 72.84 12 3.5 No 33 -3.5 No 0 0 No -19 0.62 No 51 42.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108236273 + NM_000051 ATM 0 . . . 2.35 0 16 4.47 No 9 1.03 Yes 0 0 No -18 0.35 No 37 63.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41248996 - NM_007294 BRCA1 0 . . . 6.36 77.07 20 5.1 No 24 1.35 Yes 0 0 No -19 0.73 Yes 34 68.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68884628 + NM_133509 RAD51B 0 . . . 0.49 69.71 21 5.19 No 68 0.03 No 0 0 No -23 0.76 Yes 30 31.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68893630 + NM_133509 RAD51B 0 . . . 3.68 79.65 33 6.56 Yes 51 -4.15 No 0 0 No -32 0.75 Yes 50 47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104164465 - NM_001100119 XRCC3 0 . . . 2.46 77.45 22 5 No 33 -2.15 No 0 0 No -21 0.79 Yes 35 51.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190672612 + NM_000534 PMS1 0 . . . 3.62 81.78 83 6.6 Yes 7 1.39 Yes 0 0 No -24 0.67 Yes 51 52.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68916215 + NM_133509 RAD51B 0 . . . 3.42 82.4 24 4.05 No 58 1.74 Yes 0 0 No -19 0.47 No 36 80.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215620210 - NM_000465 BARD1 0 . . . 4.35 85.57 19 5 No 62 0.83 Yes 0 0 No -42 0.47 No 48 52.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108228257 + NM_000051 ATM 0 . . . 0.52 0 12 4.8 No -2 0.96 Yes 0 0 No -16 0.36 No 56 45.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68817370 + NM_133509 RAD51B 0 . . . 0.45 0 22 5.29 No 67 0.13 No 0 0 No -24 0.26 No 49 51.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68972312 + NM_133509 RAD51B 0 . . . 3.19 82.47 31 5.48 No 57 0.17 No 0 0 No -23 0.85 Yes 18 65.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68914199 + NM_133509 RAD51B 0 . . . 3.18 76.67 13 4.87 No 51 1.13 Yes 0 0 No -18 0.58 No 30 65.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94150569 - NM_005591 MRE11 0 . . . 3.01 83.57 25 5.57 Yes 29 0.86 Yes 0 0 No -24 0.89 Yes 50 72.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68626406 + NM_133509 RAD51B 0 . . . 5.02 87.99 15 5 No 18 1.01 Yes 0 0 No -14 0.42 No 49 41.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190646930 + NM_000534 PMS1 0 . . . 3.68 70.85 67 8.39 Yes 21 1.72 Yes 0 0 No -40 0.42 No 37 78.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68584868 + NM_133509 RAD51B 0 . . . 3.22 67.69 18 5.57 Yes 59 0.46 No 0 0 No -24 0.36 No 51 42.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69002543 + NM_133509 RAD51B 0 . . . 2.19 73.39 16 5.2 No 27 0.43 No 0 0 No -15 0.28 No 43 55.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105200138 + NM_021930 RINT1 0 . . . 3.56 80.22 17 4.78 No 66 -4.9 No 0 0 No -21 0.5 No 39 46.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59942326 - NM_032043 BRIP1 0 . . . 3.25 80.12 31 5.66 Yes 8 1.2 Yes 0 0 No -30 0.48 No 50 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105205078 + NM_021930 RINT1 0 . . . 2.05 80.88 17 5.19 No 65 0.85 Yes 0 0 No -16 0.3 No 49 48.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37071420 + NM_000249 MLH1 0 . . . 6.66 73.27 16 4.65 No 58 1.23 Yes 0 0 No -53 0.42 No 47 86.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68635751 + NM_133509 RAD51B 0 . . . 10.53 85.2 41 6.67 Yes 70 0.2 No 0 0 No -34 0.61 No 46 86.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94172637 - NM_005591 MRE11 0 . . . 0.07 72.28 16 4.51 No 76 -3.49 No 0 0 No -21 0.85 Yes 43 65.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89672407 + NM_000314 PTEN 0 . . . 4.05 80.28 30 5.06 No 76 0.36 No 0 0 No -23 0.65 No 36 91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47679566 + NM_000251 MSH2 0 . . . 0.88 74.73 12 5.57 Yes 34 1.04 Yes 0 0 No -24 0.36 No 19 60.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59901558 - NM_032043 BRIP1 0 . . . 10.53 92.33 12 4 No 6 0.87 Yes 0 0 No -27 0.92 Yes 46 68.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32963985 + NM_000059 BRCA2 0 . . . 8.22 80.47 28 5.56 Yes 8 1.11 Yes 0 0 No -27 0.72 Yes 50 79.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59898574 - NM_032043 BRIP1 0 . . . 3.02 67.18 15 4.58 No 14 1.43 Yes 0 0 No -30 0.59 No 44 88.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6034934 - NM_000535 PMS2 0 . . . 0.32 74.68 19 5.47 No 33 0.42 No 0 0 No -28 0.78 Yes 54 78.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108116341 + NM_000051 ATM 0 . . . 1.23 70.41 28 5.54 No 15 0.79 Yes 0 0 No -27 0.62 No 33 80.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69147771 + NM_133509 RAD51B 0 . . . 6.72 93.16 23 6.55 Yes 11 0.31 No 0 0 No -22 0.82 Yes 47 85.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68883301 + NM_133509 RAD51B 0 . . . 3.42 79.14 15 5.91 Yes 30 0.16 No 0 0 No -25 0.53 No 46 86.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69089885 + NM_133509 RAD51B 0 . . . 5.45 89.73 22 5.1 No 59 -3.64 No 0 0 No -21 0.48 No 46 49.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131937244 + NM_005732 RAD50 0 . . . 2.09 71.58 60 7.57 Yes 43 0.39 No 0 0 No -55 0.81 Yes 42 73.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68582046 + NM_133509 RAD51B 0 . . . 7.57 83.03 14 5.08 No -4 0.73 No 0 0 No -24 0.86 Yes 46 53.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69088683 + NM_133509 RAD51B 0 . . . 2.52 66.84 23 5.91 Yes 15 0.46 No 0 0 No -22 0.75 Yes 47 90.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33448775 - NM_002878 RAD51D 0 . . . 0.69 70.64 61 7.81 Yes 48 -3.76 No 0 0 No -29 0.74 Yes 48 76.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108168240 + NM_000051 ATM 0 . . . 2.42 77.09 11 3.87 No 53 0.3 No 0 0 No -33 0.43 No 48 35.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68420846 + NM_133509 RAD51B 0 . . . 2.63 71.31 28 5.52 No 57 0.92 Yes 0 0 No -27 0.7 Yes 43 44.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104170614 - NM_001100119 XRCC3 0 . . . 2.31 75.7 24 4.71 No 38 1.03 Yes 0 0 No -23 0.82 Yes 48 41.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215595997 - NM_000465 BARD1 0 . . . 0.94 71.12 37 5.51 No 45 -3.83 No 0 0 No -30 0.5 No 51 63.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68382375 + NM_133509 RAD51B 0 . . . 7.16 83.12 17 5.73 Yes 33 -1.54 No 0 0 No -16 0.59 No 50 81.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68847867 + NM_133509 RAD51B 0 . . . 7 79.03 19 4.47 No 7 0.68 No 0 0 No -18 0.9 Yes 46 48.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94181750 - NM_005591 MRE11 0 . . . 4.28 73.87 14 4.47 No 2 1.43 Yes 0 0 No -35 0.72 Yes 15 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56781043 + NM_058216 RAD51C 0 . . . 1.49 79.65 25 5.95 Yes 61 -0.94 No 0 0 No -24 0.76 Yes 49 37.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94225671 - NM_005591 MRE11 0 . . . 2.77 68.63 31 5.48 No 34 0.33 No 0 0 No -30 0.88 Yes 46 77.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29129883 - NM_001005735 CHEK2 0 . . . 4.74 79.82 34 4.9 No 46 -0.91 No 0 0 No -27 0.87 Yes 18 77.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89708970 + NM_000314 PTEN 0 . . . 4.28 76.33 41 6.48 Yes 21 0.48 No 0 0 No -27 0.66 No 37 66.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59858716 - NM_032043 BRIP1 0 . . . 2.32 67.02 22 4.9 No 48 1.46 Yes 0 0 No -21 0.93 Yes 31 71.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190686461 + NM_000534 PMS1 0 . . . 0.93 78.54 21 4.56 No 62 -5.38 No 0 0 No -23 0.72 Yes 45 79.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68610691 + NM_133509 RAD51B 0 . . . 3.7 78.28 41 5.82 Yes 55 1.76 Yes 0 0 No -28 0.5 No 37 86.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68776865 + NM_133509 RAD51B 0 . . . 0.57 0 44 8.25 Yes 57 0.95 Yes 0 0 No -43 0.59 No 32 41.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47754456 + NM_000251 MSH2 0 . . . 9.79 89.58 13 4.82 No 58 1.44 Yes 0 0 No -17 0.4 No 48 62.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68380053 + NM_133509 RAD51B 0 . . . 0.53 66.1 36 5.74 Yes 56 1.16 Yes 0 0 No -35 0.94 Yes 38 53.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68768659 + NM_133509 RAD51B 0 . . . 6.97 85.44 27 7.28 Yes 0 0.5 No 0 0 No -27 0.55 No 45 49.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59917005 - NM_032043 BRIP1 0 . . . 3.62 64.63 15 4.61 No 47 1.33 Yes 0 0 No -26 0.54 No 44 50.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41003637 + NM_001164269 RAD51 0 . . . 1.47 83.83 28 5.48 No 8 0.52 No 0 0 No -27 0.59 No 50 85.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190696114 + NM_000534 PMS1 0 . . . 3.94 72.69 17 7.16 Yes 58 -4.99 No 0 0 No -24 0.46 No 48 54.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56792991 + NM_058216 RAD51C 0 . . . 6.28 78.76 21 4.69 No 3 1.84 Yes 0 0 No -30 0.45 No 38 59.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68341034 + NM_133509 RAD51B 0 . . . 6.73 76.51 28 5.83 Yes 48 0.65 No 0 0 No -27 0.7 Yes 41 57.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68543419 + NM_133509 RAD51B 0 . . . 4.06 82.86 17 5.83 Yes 17 1.03 Yes 0 0 No -27 0.75 Yes 41 61.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68634647 + NM_133509 RAD51B 0 . . . 5.3 79.64 29 5.45 No 3 1.04 Yes 0 0 No -23 0.56 No 40 65.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68743613 + NM_133509 RAD51B 0 . . . 0.91 68.23 19 4.58 No 71 -6.31 No 0 0 No -18 0.38 No 37 28.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90947962 - NM_002485 NBN 0 . . . 1.61 75.93 35 5.75 Yes -4 0.5 No 0 0 No -18 0.5 No 54 44.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68787366 + NM_133509 RAD51B 0 . . . 6.66 80.12 30 6 Yes 32 -2.43 No 0 0 No -25 0.47 No 34 50.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108227309 + NM_000051 ATM 0 . . . 1.13 76.87 34 4.71 No 30 -3.22 No 0 0 No -30 0.48 No 47 12.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90962256 - NM_002485 NBN 0 . . . 7.21 81.78 33 6.24 Yes 8 1.05 Yes 0 0 No -32 0.88 Yes 45 45.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69068589 + NM_133509 RAD51B 0 . . . 3.63 69.28 39 6.63 Yes 22 1.21 Yes 0 0 No -37 0.72 Yes 36 71.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89693629 + NM_000314 PTEN 0 . . . 3.26 80.03 24 5.38 No 37 0.85 Yes 0 0 No -49 0.47 No 42 83.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47677289 + NM_000251 MSH2 0 . . . 5.73 79.71 19 6.47 Yes 3 1.05 Yes 0 0 No -18 0.49 No 44 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68387503 + NM_133509 RAD51B 0 . . . 2.81 59.34 22 7.14 Yes -4 0.55 No 0 0 No -36 0.63 No 42 51.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90959640 - NM_002485 NBN 0 . . . 5.07 80.23 18 4.07 No 57 0.63 No 0 0 No -23 0.21 No 15 62.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6014943 - NM_000535 PMS2 0 . . . 1.08 79.02 103 6.48 Yes 69 -4.75 No 0 0 No -31 0.79 Yes 50 39.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190669169 + NM_000534 PMS1 0 . . . 8.51 79.75 31 5.55 No 73 0.57 No 0 0 No -26 0.87 Yes 47 94.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190667782 + NM_000534 PMS1 0 . . . 2.28 76.83 25 5.57 Yes -4 0.39 No 0 0 No -25 0.57 No 22 52.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69018625 + NM_133509 RAD51B 0 . . . 12.37 87.6 14 5.57 Yes 10 0.5 No 0 0 No -26 0.46 No 42 52.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47650214 + NM_000251 MSH2 0 . . . 9.8 84.68 9 3.87 No 67 -4.32 No 0 0 No -21 0.35 No 40 59.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90994356 - NM_002485 NBN 0 . . . 1.24 52.81 30 8 Yes 74 0.84 Yes 0 0 No -29 0.77 Yes 44 25.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59765423 - NM_032043 BRIP1 0 . . . 0.7 77.36 25 6.81 Yes 67 -5.35 No 0 0 No -24 0.65 No 40 35.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84386840 - NM_139076 FAM175A 0 . . . 5.46 86.63 13 3.84 No 3 0.93 Yes 0 0 No -28 0.44 No 50 89.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69012180 + NM_133509 RAD51B 0 . . . 3.61 81.22 15 5.98 Yes 57 1.54 Yes 0 0 No -18 0.4 No 50 67.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47723796 + NM_000251 MSH2 0 . . . 3.6 82.97 25 5.48 No 42 -4.06 No 0 0 No -24 0.82 Yes 45 56.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68901921 + NM_133509 RAD51B 0 . . . 1.6 0 31 5.48 No 29 0.99 Yes 0 0 No -11 0.42 No 29 79.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190697547 + NM_000534 PMS1 0 . . . 4.5 72.75 28 5.18 No 68 -4.02 No 0 0 No -27 0.66 No 50 73.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37054028 + NM_000249 MLH1 0 . . . 4.58 76.57 15 5.28 No 64 0.83 Yes 0 0 No -21 0.45 No 46 35.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108207348 + NM_000051 ATM 0 . . . 1.89 67.65 26 5.38 No 23 0.17 No 0 0 No -25 0.88 Yes 49 30.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108124604 + NM_000051 ATM 0 . . . 0.84 84.33 26 6.04 Yes 64 0.53 No 0 0 No -25 0.73 Yes 45 44.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68309479 + NM_133509 RAD51B 0 . . . 7.26 82.17 29 3.91 No 0 0.38 No 0 0 No -25 0.47 No 43 76.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69066921 + NM_133509 RAD51B 0 . . . 1.79 61.88 17 4.79 No 43 1.13 Yes 0 0 No -41 0.8 Yes 62 55.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59897302 - NM_032043 BRIP1 0 . . . 4.43 65.93 19 5.38 No 43 -4.22 No 0 0 No -27 0.36 No 41 53.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47729932 + NM_000251 MSH2 0 . . . 0.06 0 19 4.52 No 59 -5.36 No 0 0 No -18 0.64 No 48 79.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68457398 + NM_133509 RAD51B 0 . . . 1.39 74.71 14 4.93 No 5 0.72 No 0 0 No -26 0.74 Yes 43 42.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59785079 - NM_032043 BRIP1 0 . . . 3.71 74.82 18 5.29 No 12 -2.11 No 0 0 No -17 0.67 Yes 46 88.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108129846 + NM_000051 ATM 0 . . . 6.68 83.3 17 4.8 No 58 0.4 No 0 0 No -16 0.39 No 28 63.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47705129 + NM_000251 MSH2 0 . . . 10.73 88.27 11 5.2 No 14 0.86 Yes 0 0 No -26 0.35 No 44 88.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69020599 + NM_133509 RAD51B 0 . . . 1.32 70.62 15 4.33 No 59 0.74 No 0 0 No -23 0.8 Yes 49 37.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94191331 - NM_005591 MRE11 0 . . . 7.62 78.85 17 5.82 Yes 3 0.93 Yes 0 0 No -29 0.42 No 36 63.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108097262 + NM_000051 ATM 0 . . . 6.45 83.1 20 5.27 No 5 0.07 No 0 0 No -19 0.39 No 39 88.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23626006 - NM_024675 PALB2 0 . . . 0.35 0 13 5.37 No 27 0.3 No 0 0 No -30 0.51 No 51 40.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68289001 + NM_133509 RAD51B 0 . . . 5.48 82.52 33 5.74 Yes 0 1.21 Yes 0 0 No -32 0.69 Yes 52 97.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68532553 + NM_133509 RAD51B 0 . . . 5.96 75.29 31 6.01 Yes 62 -3.55 No 0 0 No -30 0.69 Yes 44 67.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68774788 + NM_004360 CDH1 0 . . . 2.15 72.66 22 4.54 No -4 0.26 No 0 0 No -45 0.72 Yes 46 30.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68909339 + NM_133509 RAD51B 0 . . . 3.6 85.02 40 7.27 Yes 4 1.05 Yes 0 0 No -39 0.85 Yes 54 75.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68829209 + NM_004360 CDH1 0 . . . 4.8 85.39 28 4.07 No 15 0.7 No 0 0 No -31 0.66 No 51 44.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41271592 - NM_007294 BRCA1 0 . . . 1.49 0 16 5.29 No 13 0.42 No 0 0 No -21 0.4 No 45 43.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47654149 + NM_000251 MSH2 0 . . . 6.35 80.03 64 8.62 Yes 20 0.96 Yes 0 0 No -23 0.8 Yes 38 95.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68662739 + NM_133509 RAD51B 0 . . . 0.94 69.77 13 5.2 No 56 -3.24 No 0 0 No -20 0.37 No 49 35.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48034532 + NM_000179 MSH6 0 . . . 7.12 85.28 17 4.07 No -1 1.46 Yes 0 0 No -24 0.66 No 47 95.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68784199 + NM_004360 CDH1 0 . . . 5.73 81.49 27 6.57 Yes 64 1.43 Yes 0 0 No -26 0.68 Yes 22 67.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59919695 - NM_032043 BRIP1 0 . . . 9.21 79.13 24 6.5 Yes 51 1.34 Yes 0 0 No -23 0.51 No 46 95.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108209857 + NM_000051 ATM 0 . . . 4.42 68.2 34 8.48 Yes 38 -1.96 No 0 0 No -33 0.9 Yes 53 40.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215631476 - NM_000465 BARD1 0 . . . 2.02 74.48 58 7.66 Yes 62 -5.27 No 0 0 No -43 0.57 No 49 41.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75517088 - NM_001040108 MLH3 0 . . . 1.59 66.83 16 4.57 No 76 0.27 No 0 0 No -19 0.37 No 49 47.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59856978 - NM_032043 BRIP1 0 . . . 0.8 83.57 22 4.58 No 62 0.63 No 0 0 No -21 0.83 Yes 29 68.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59786825 - NM_032043 BRIP1 0 . . . 0.4 76.72 41 8.87 Yes 33 1.16 Yes 0 0 No -40 0.7 Yes 16 83.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59808085 - NM_032043 BRIP1 0 . . . 5.87 80.59 32 5.74 Yes 28 1.55 Yes 0 0 No -26 0.41 No 50 70.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68601084 + NM_133509 RAD51B 0 . . . 0.41 60.67 16 4.69 No 19 0.87 Yes 0 0 No -44 0.55 No 27 68.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47689558 + NM_000251 MSH2 0 . . . 8.89 74.31 29 3.51 No 21 0.28 No 0 0 No -32 0.83 Yes 37 87.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56782544 + NM_058216 RAD51C 0 . . . 1.52 77.68 24 6.24 Yes -2 0.44 No 0 0 No -23 0.89 Yes 49 64.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190722277 + NM_000534 PMS1 0 . . . 0.18 0 25 5.21 No 28 -2.07 No 0 0 No -24 0.58 No 47 40.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47791142 + NM_000251 MSH2 0 . . . 3.85 72.32 20 4.79 No 8 0.59 No 0 0 No -19 0.68 Yes 50 78.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47636440 + NM_000251 MSH2 0 . . . 3.68 70.85 23 3.66 No 23 1.58 Yes 0 0 No -22 0.7 Yes 45 74.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105199294 + NM_021930 RINT1 0 . . . 3.32 80.19 31 5.69 Yes 36 -3.49 No 0 0 No -28 0.8 Yes 49 47.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33437880 - NM_002878 RAD51D 0 . . . 2.89 68.34 26 5 No 22 1.54 Yes 0 0 No -25 0.66 No 46 70.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23649391 - NM_024675 PALB2 0 . . . 0.9 0 34 5.4 No 46 -3.46 No 0 0 No -21 0.52 No 57 29.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75513980 - NM_001040108 MLH3 0 . . . 3.01 76.86 18 4.7 No 2 1.31 Yes 0 0 No -35 0.57 No 44 63.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37093395 + NM_000249 MLH1 0 . . . 2.59 67.71 11 5.65 Yes 55 -3.76 No 0 0 No -27 0.84 Yes 52 46.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68828958 + NM_004360 CDH1 0 . . . 1.81 81.83 21 4.58 No 42 1.67 Yes 0 0 No -50 0.63 No 49 37.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41196692 - NM_007294 BRCA1 0 . . . 3.65 73.26 30 5.52 No 0 1.37 Yes 0 0 No -29 0.63 No 43 59.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131968050 + NM_005732 RAD50 0 . . . 4.5 77.46 25 6.48 Yes 0 0.75 No 0 0 No -24 0.6 No 48 67.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89649249 + NM_000314 PTEN 0 . . . 2.18 79.97 21 5.92 Yes 56 0.21 No 0 0 No -20 0.66 Yes 49 48.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68792021 + NM_004360 CDH1 0 . . . 2.52 62.32 20 5.1 No 64 0.83 Yes 0 0 No -25 0.65 No 44 38.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56774263 + NM_058216 RAD51C 0 . . . 1.97 64.23 31 5.83 Yes 16 0.83 Yes 0 0 No -30 0.61 No 38 48.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89699465 + NM_000314 PTEN 0 . . . 2.04 63.02 35 6.78 Yes 32 0.71 No 0 0 No -34 0.87 Yes 37 66.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7576416 - NM_000546 TP53 0 . . . 3.67 84 17 5.72 Yes 2 1.5 Yes 0 0 No -16 0.41 No 16 68.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94227619 - NM_005591 MRE11 0 . . . 2.94 66.01 28 5.83 Yes 75 -5.81 No 0 0 No -46 0.88 Yes 50 48.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68711401 + NM_133509 RAD51B 0 . . . 0.52 70.51 24 5.47 No 60 0.44 No 0 0 No -23 0.77 Yes 49 58.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673760 + NM_000534 PMS1 0 . . . 0.34 59.03 17 4.8 No 64 0.46 No 0 0 No -29 0.61 No 44 70.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68648297 + NM_133509 RAD51B 0 . . . 1.84 68.42 32 4.67 No 7 1.04 Yes 0 0 No -31 0.82 Yes 30 67.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69014880 + NM_133509 RAD51B 0 . . . 4.65 84.24 27 5.39 No 31 1.41 Yes 0 0 No -24 0.72 Yes 27 74.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47679223 + NM_000251 MSH2 0 . . . 1.76 70 30 5.74 Yes 40 0.74 No 0 0 No -29 0.93 Yes 35 57.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68481517 + NM_133509 RAD51B 0 . . . 0.52 66.15 21 5.05 No 76 -5.83 No 0 0 No -45 0.64 No 47 77.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94157899 - NM_005591 MRE11 0 . . . 5.6 85.76 26 5.71 Yes 3 0.87 Yes 0 0 No -25 0.67 Yes 47 61.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215635732 - NM_000465 BARD1 0 . . . 6.36 88.42 15 4.58 No 27 1.51 Yes 0 0 No -57 0.8 Yes 41 62.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29131293 - NM_001005735 CHEK2 0 . . . 1.08 84.22 14 7.21 Yes 33 0.59 No 0 0 No -47 0.73 Yes 50 76.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68943729 + NM_133509 RAD51B 0 . . . 6.36 86.08 22 6.46 Yes 54 -1.55 No 0 0 No -21 0.96 Yes 47 36.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59899623 - NM_032043 BRIP1 0 . . . 3.63 61.58 19 6.06 Yes 29 0.66 No 0 0 No -22 0.75 Yes 47 37.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68625140 + NM_133509 RAD51B 0 . . . 6.46 77.62 46 8.65 Yes 67 0.81 Yes 0 0 No -42 0.35 No 48 41.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59913743 - NM_032043 BRIP1 0 . . . 1.2 74.68 23 5.19 No 11 0.52 No 0 0 No -22 0.5 No 47 63.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56772046 + NM_058216 RAD51C 0 . . . 0.27 74.73 21 4.9 No 33 1.16 Yes 0 0 No -20 0.87 Yes 25 45.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37044223 + NM_000249 MLH1 0 . . . 4.92 76.19 15 4.58 No 8 0.81 Yes 0 0 No -42 0.41 No 50 75.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68422004 + NM_133509 RAD51B 0 . . . 4.78 70.51 22 6.8 Yes 3 0.58 No 0 0 No -33 0.61 No 45 72.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131931663 + NM_005732 RAD50 0 . . . 5.15 84.42 27 5.21 No 50 0.83 Yes 0 0 No -26 0.63 No 43 44.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108236990 + NM_000051 ATM 0 . . . 2.61 0 30 4.33 No 72 1.25 Yes 0 0 No -33 0.7 Yes 54 59.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59841888 - NM_032043 BRIP1 0 . . . 4.76 78.2 17 4.8 No 36 0.54 No 0 0 No -35 0.59 No 47 57.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190727275 + NM_000534 PMS1 0 . . . 3.78 79.55 10 3.44 No 57 2.14 Yes 0 0 No -27 0.87 Yes 47 45.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68834441 + NM_004360 CDH1 0 . . . 5.13 75.65 24 6.33 Yes 2 1.28 Yes 0 0 No -23 0.88 Yes 47 64.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105203069 + NM_021930 RINT1 0 . . . 3.5 84.07 28 6.15 Yes 70 0.02 No 0 0 No -27 0.68 Yes 48 66.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68486386 + NM_133509 RAD51B 0 . . . 4.24 81.54 17 5.57 Yes 57 -4.72 No 0 0 No -24 0.68 Yes 38 74.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68608597 + NM_133509 RAD51B 0 . . . 7.47 80.13 22 5.74 Yes 41 2.17 Yes 0 0 No -21 0.73 Yes 39 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68635888 + NM_133509 RAD51B 0 . . . 3.5 83.58 33 5.62 Yes 18 0.73 No 0 0 No -25 0.49 No 36 85.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68830085 + NM_133509 RAD51B 0 . . . 5.2 73.95 22 5.82 Yes 8 0.73 No 0 0 No -22 0.48 No 50 86.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69063628 + NM_133509 RAD51B 0 . . . 4.63 73.77 39 6.27 Yes 71 -3.47 No 0 0 No -38 0.65 No 43 84.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68840264 + NM_133509 RAD51B 0 . . . 2.95 77.92 37 6.08 Yes 40 -3.52 No 0 0 No -36 0.57 No 53 38.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69004096 + NM_133509 RAD51B 0 . . . 0.36 61.05 36 5.62 Yes 57 1.21 Yes 0 0 No -24 0.55 No 42 59.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21967400 - NM_000077 CDKN2A 0 . . . 2.23 66.29 21 5.2 No 35 -1.54 No 0 0 No -20 0.87 Yes 46 55.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69102538 + NM_133509 RAD51B 0 . . . 1.68 62.93 50 7.07 Yes -2 0.72 No 0 0 No -28 0.72 Yes 60 35.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215598263 - NM_000465 BARD1 0 . . . 1.19 73.08 25 4.9 No 21 0.86 Yes 0 0 No -24 0.76 Yes 50 43.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68920864 + NM_133509 RAD51B 0 . . . 0.81 58.18 28 5.45 No 28 0.23 No 0 0 No -27 0.93 Yes 35 62.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94187915 - NM_005591 MRE11 0 . . . 3.17 75.63 39 7.93 Yes 2 0.33 No 0 0 No -42 0.72 Yes 47 39.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215663900 - NM_000465 BARD1 0 . . . 1.04 83.38 23 5.13 No 57 1.27 Yes 0 0 No -22 0.89 Yes 44 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41272838 - NM_007294 BRCA1 0 . . . 3.93 69.13 29 5.29 No 21 0.99 Yes 0 0 No -28 0.54 No 37 54.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29096066 - NM_001005735 CHEK2 0 . . . 1 61.56 14 4.47 No 37 0.83 Yes 0 0 No -22 0.42 No 49 83.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105196268 + NM_021930 RINT1 0 . . . 3.36 76.08 19 5.92 Yes 71 -5.82 No 0 0 No -18 0.83 Yes 45 70.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68838202 + NM_004360 CDH1 0 . . . 3.25 80.12 28 4.62 No 75 0.95 Yes 0 0 No -31 0.56 No 50 79.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33430201 - NM_002878 RAD51D 0 . . . 4.76 73.88 25 5.27 No 36 0.76 No 0 0 No -24 0.32 No 44 73.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68556690 + NM_133509 RAD51B 0 . . . 0.83 70.57 12 5.65 Yes 62 0.7 No 0 0 No -20 0.45 No 32 32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131934675 + NM_005732 RAD50 0 . . . 3.53 83.46 34 8.04 Yes 3 2.14 Yes 0 0 No -20 0.51 No 40 91.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68555294 + NM_133509 RAD51B 0 . . . 4.09 77 23 5.59 Yes 45 0.72 No 0 0 No -22 0.93 Yes 40 46.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37092789 + NM_000249 MLH1 0 . . . 1.97 80.65 20 5 No 13 1.55 Yes 0 0 No -22 0.77 Yes 45 79.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190669425 + NM_000534 PMS1 0 . . . 2.27 75.61 37 6.24 Yes 34 -3.84 No 0 0 No -25 0.56 No 46 33.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68458860 + NM_133509 RAD51B 0 . . . 6.73 80.78 19 5 No -2 0.12 No 0 0 No -18 0.59 No 49 47.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68969160 + NM_133509 RAD51B 0 . . . 4.23 87.12 27 5.74 Yes 12 0.14 No 0 0 No -29 0.46 No 51 49.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33435120 - NM_002878 RAD51D 0 . . . 1.59 63.87 28 4.69 No 70 1.77 Yes 0 0 No -30 0.89 Yes 49 64.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68787328 + NM_133509 RAD51B 0 . . . 0.27 72.86 32 7.32 Yes 61 0.52 No 0 0 No -22 0.49 No 18 38.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69033145 + NM_133509 RAD51B 0 . . . 2.92 69.76 35 4.64 No 44 1.37 Yes 0 0 No -30 0.61 No 51 37.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68533634 + NM_133509 RAD51B 0 . . . 5.47 79.1 21 5.66 Yes 73 -5.88 No 0 0 No -29 0.79 Yes 44 76.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131981056 + NM_005732 RAD50 0 . . . 5.01 69.5 22 5.29 No 31 0.72 No 0 0 No -28 0.27 No 48 78.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131911761 + NM_005732 RAD50 0 . . . 0.09 0 25 5.97 Yes 68 0.68 No 0 0 No -24 0.58 No 48 80.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90957839 - NM_002485 NBN 0 . . . 1.44 82.94 27 5.72 Yes 35 1.28 Yes 0 0 No -23 0.41 No 48 55.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7584531 - NM_000546 TP53 0 . . . 1.89 0 13 5.24 No 20 0.34 No 0 0 No -23 0.64 No 38 56.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59895325 - NM_032043 BRIP1 0 . . . 0.41 73.22 38 7.7 Yes 60 1.32 Yes 0 0 No -37 0.62 No 33 44.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68791086 + NM_004360 CDH1 0 . . . 5.99 86.2 81 10.75 Yes 9 0.98 Yes 0 0 No -27 0.51 No 49 90.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68847721 + NM_004360 CDH1 0 . . . 1.26 74.68 30 6 Yes 56 -5.21 No 0 0 No -29 0.59 No 52 59.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108202423 + NM_000051 ATM 0 . . . 0.61 60.45 31 5.48 No 0 0.19 No 0 0 No -23 0.7 Yes 33 74.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69111521 + NM_133509 RAD51B 0 . . . 5.7 76.08 38 5.3 No 25 1.01 Yes 0 0 No -25 0.59 No 44 46.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68564311 + NM_133509 RAD51B 0 . . . 3.02 72.75 35 5.55 No 40 0.84 Yes 0 0 No -15 0.5 No 26 54.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59866758 - NM_032043 BRIP1 0 . . . 4.34 70.06 16 5.29 No 14 0.29 No 0 0 No -60 0.35 No 41 82.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69098926 + NM_133509 RAD51B 0 . . . 6.11 78.02 23 5.19 No 45 1.08 Yes 0 0 No -22 0.81 Yes 45 92.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68590210 + NM_133509 RAD51B 0 . . . 3.79 77.46 29 7.62 Yes 56 0.54 No 0 0 No -28 0.85 Yes 51 43.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68844485 + NM_004360 CDH1 0 . . . 10.81 92.63 18 5.45 No 72 0.98 Yes 0 0 No -26 0.33 No 46 68.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68818832 + NM_004360 CDH1 0 . . . 5.86 79.31 20 5.56 Yes 57 1.56 Yes 0 0 No -19 0.41 No 44 74.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84381893 - NM_139076 FAM175A 0 . . . 4.08 85.02 27 5.74 Yes 73 0.64 No 0 0 No -49 0.52 No 43 70.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68993205 + NM_133509 RAD51B 0 . . . 4.31 72.12 27 5.1 No 74 0.76 No 0 0 No -26 0.69 Yes 47 63.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29124341 - NM_001005735 CHEK2 0 . . . 5.84 89.53 11 4.12 No 66 0.72 No 0 0 No -35 0.58 No 44 71.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89625264 + NM_000314 PTEN 0 . . . 5.01 0 17 4.69 No 6 1.95 Yes 0 0 No -19 0.77 Yes 52 74.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68822225 + NM_133509 RAD51B 0 . . . 4.62 82.07 26 4.94 No 6 0.65 No 0 0 No -23 0.65 No 49 80.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75499722 - NM_001040108 MLH3 0 . . . 5.73 68.9 16 5.11 No 75 0.79 Yes 0 0 No -27 0.67 Yes 45 65.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104162598 - NM_001100119 XRCC3 0 . . . 5.02 87.43 24 5.33 No 12 0.91 Yes 0 0 No -24 0.79 Yes 50 53.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68422203 + NM_133509 RAD51B 0 . . . 5.28 77.84 14 5.83 Yes 72 -2.5 No 0 0 No -25 0.37 No 41 56.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190701938 + NM_000534 PMS1 0 . . . 3.2 72.13 18 4.5 No 45 0.29 No 0 0 No -48 0.75 Yes 13 59.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68706383 + NM_133509 RAD51B 0 . . . 4.71 74.86 22 5.1 No 70 2.13 Yes 0 0 No -27 0.47 No 41 61.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68354982 + NM_133509 RAD51B 0 . . . 6.92 76.54 28 5.64 Yes 15 1.25 Yes 0 0 No -27 0.83 Yes 49 89.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68563167 + NM_133509 RAD51B 0 . . . 1.44 76.34 13 4.9 No 74 1.34 Yes 0 0 No -28 0.57 No 51 26.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59933590 - NM_032043 BRIP1 0 . . . 0.43 68.57 31 4.26 No 17 -1.9 No 0 0 No -21 0.62 No 52 63.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694551 + NM_000534 PMS1 0 . . . 3.72 70.01 37 7.47 Yes 53 1.39 Yes 0 0 No -36 0.7 Yes 38 38.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131974931 + NM_005732 RAD50 0 . . . 1.44 74.68 38 5.67 Yes 61 1.06 Yes 0 0 No -16 0.47 No 52 85.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68639572 + NM_133509 RAD51B 0 . . . 6.29 80.76 25 5.51 No 12 0.78 Yes 0 0 No -24 0.83 Yes 49 60.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94183423 - NM_005591 MRE11 0 . . . 4.28 79.45 31 7.42 Yes 3 0.69 No 0 0 No -30 0.9 Yes 45 55.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215593492 - NM_000465 BARD1 0 . . . 4.48 78.78 9 5.57 Yes 45 0.95 Yes 0 0 No -24 0.33 No 39 61.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94213473 - NM_005591 MRE11 0 . . . 3.12 72.83 22 7.26 Yes 74 -3.31 No 0 0 No -21 0.79 Yes 38 49.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108205861 + NM_000051 ATM 0 . . . 7.14 75.26 24 5.48 No 10 0.68 No 0 0 No -24 0.47 No 43 80.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94191386 - NM_005591 MRE11 0 . . . 2.2 85.14 17 4.58 No 21 0.22 No 0 0 No -16 0.85 Yes 29 76.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29136623 - NM_001005735 CHEK2 0 . . . 3.52 74.79 16 4.69 No 71 -4.03 No 0 0 No -44 0.54 No 43 64.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68655515 + NM_133509 RAD51B 0 . . . 4.38 81.03 28 5.81 Yes 29 1.03 Yes 0 0 No -28 0.44 No 41 54.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68664729 + NM_133509 RAD51B 0 . . . 0.93 0 20 4.77 No 51 0.7 No 0 0 No -19 0.93 Yes 34 41.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21990204 - NM_000077 CDKN2A 0 . . . 2.75 77.96 19 4.58 No 70 0.83 Yes 0 0 No -18 0.63 No 54 39.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68839679 + NM_004360 CDH1 0 . . . 1.06 78.81 21 5.2 No 4 0.91 Yes 0 0 No -45 0.5 No 45 65.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89622767 + NM_000314 PTEN 0 . . . 0.92 61.3 46 7.3 Yes 71 -5.38 No 0 0 No -27 0.88 Yes 54 28.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68579832 + NM_133509 RAD51B 0 . . . 4.94 77.94 23 8.12 Yes -1 0.62 No 0 0 No -22 0.91 Yes 42 74.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1210486 + NM_000455 STK11 0 . . . 1.95 0 25 4.04 No 19 0.81 Yes 0 0 No -25 0.56 No 39 83.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41225395 - NM_007294 BRCA1 0 . . . 5.71 70.42 48 6.93 Yes 18 0.88 Yes 0 0 No -29 0.43 No 45 64.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69044822 + NM_133509 RAD51B 0 . . . 3.95 82.07 16 4.97 No 5 0.51 No 0 0 No -25 0.57 No 42 53.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59874585 - NM_032043 BRIP1 0 . . . 0.33 57.33 46 7.13 Yes 53 0.77 Yes 0 0 No -39 0.54 No 51 58.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29085504 - NM_001005735 CHEK2 0 . . . 7.29 85.28 17 5.57 Yes 5 1.37 Yes 0 0 No -24 0.76 Yes 53 83.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68380002 + NM_133509 RAD51B 0 . . . 1.28 70 23 5.78 Yes 5 1.18 Yes 0 0 No -23 0.63 No 48 83.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33432356 - NM_002878 RAD51D 0 . . . 2.78 67.64 23 5.39 No 74 -4.34 No 0 0 No -22 0.88 Yes 47 66.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68650340 + NM_133509 RAD51B 0 . . . 5.37 80.93 20 5.1 No 3 1.36 Yes 0 0 No -19 0.68 Yes 45 52.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68344273 + NM_133509 RAD51B 0 . . . 8.99 92.07 31 5.47 No 46 0.54 No 0 0 No -30 0.36 No 46 83.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37050170 + NM_000249 MLH1 0 . . . 6.24 75.02 34 5.61 Yes 12 1.32 Yes 0 0 No -31 0.63 No 46 76.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68815735 + NM_133509 RAD51B 0 . . . 1.09 75.36 20 4.89 No 7 0.65 No 0 0 No -20 0.46 No 51 64.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59792397 - NM_032043 BRIP1 0 . . . 3.6 85.02 13 4.36 No 4 1.05 Yes 0 0 No -30 0.44 No 54 72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68574315 + NM_133509 RAD51B 0 . . . 0.57 0 16 3.67 No 37 0.91 Yes 0 0 No -16 0.45 No 60 20.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68484381 + NM_133509 RAD51B 0 . . . 0.53 68.03 28 6.58 Yes 68 1.06 Yes 0 0 No -27 0.8 Yes 50 63.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29125756 - NM_001005735 CHEK2 0 . . . 0.68 55.84 10 5.74 Yes 69 -3.27 No 0 0 No -26 0.49 No 54 43.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68413181 + NM_133509 RAD51B 0 . . . 6.43 78.66 34 4.92 No 51 1.42 Yes 0 0 No -22 0.95 Yes 48 92.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94226397 - NM_005591 MRE11 0 . . . 2.6 70.52 23 5.33 No 8 -1.91 No 0 0 No -22 0.39 No 50 55.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68987236 + NM_133509 RAD51B 0 . . . 7.96 88.61 29 4.75 No -3 1.11 Yes 0 0 No -24 0.72 Yes 40 62.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89670601 + NM_000314 PTEN 0 . . . 6.88 82.41 19 7.07 Yes 68 1.12 Yes 0 0 No -18 0.63 No 41 50.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68950250 + NM_133509 RAD51B 0 . . . 0.29 62.54 18 4.9 No -1 0.44 No 0 0 No -23 0.71 Yes 50 72.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108174149 + NM_000051 ATM 0 . . . 4.55 88.21 28 5.83 Yes 52 1.26 Yes 0 0 No -27 0.85 Yes 50 87.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7586816 - NM_000546 TP53 0 . . . 0.09 74.68 13 6.55 Yes 4 0.41 No 0 0 No -25 0.86 Yes 54 75.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90961451 - NM_002485 NBN 0 . . . 0.47 0 28 5.18 No 46 0.47 No 0 0 No -27 0.67 Yes 60 40.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47766159 + NM_000251 MSH2 0 . . . 5.4 71.93 28 4.44 No 35 1.44 Yes 0 0 No -20 0.65 No 23 66.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29089746 - NM_001005735 CHEK2 0 . . . 1.41 84.22 20 4.16 No 33 0.93 Yes 0 0 No -28 0.71 Yes 50 72.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190654789 + NM_000534 PMS1 0 . . . 1.14 58.39 26 6.18 Yes 66 -4.87 No 0 0 No -25 0.84 Yes 14 32.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94159301 - NM_005591 MRE11 0 . . . 6.47 77.03 21 6.25 Yes 12 0.86 Yes 0 0 No -20 0.73 Yes 39 65.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68836081 + NM_133509 RAD51B 0 . . . 3.81 77.95 35 6.83 Yes 66 -2.1 No 0 0 No -37 0.76 Yes 49 79.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90966070 - NM_002485 NBN 0 . . . 7.05 79.89 34 5.46 No 54 -4.01 No 0 0 No -28 0.79 Yes 44 67.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68320411 + NM_133509 RAD51B 0 . . . 1.41 61.28 19 5.2 No 72 -6.27 No 0 0 No -18 0.49 No 55 47.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75483625 - NM_001040108 MLH3 0 . . . 5.45 89.22 21 4.32 No 49 -2.46 No 0 0 No -23 0.48 No 51 61.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59824951 - NM_032043 BRIP1 0 . . . 0.61 0 14 5.66 Yes 15 1.41 Yes 0 0 No -23 0.44 No 43 78.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32958238 + NM_000059 BRCA2 0 . . . 0.07 65.89 58 7.32 Yes 72 -4.87 No 0 0 No -30 0.91 Yes 45 81.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131910395 + NM_005732 RAD50 0 . . . 7.27 81.4 19 5 No 8 0.36 No 0 0 No -18 0.7 Yes 50 71.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108165531 + NM_000051 ATM 0 . . . 5.07 76.94 25 5.2 No 41 -2.48 No 0 0 No -24 0.83 Yes 49 70.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89672245 + NM_000314 PTEN 0 . . . 4.47 67.53 21 5.48 No 42 1.06 Yes 0 0 No -20 0.47 No 44 72.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152369568 - NM_005431 XRCC2 0 . . . 6.55 0 27 6.18 Yes 8 1.26 Yes 0 0 No -26 0.68 Yes 50 84.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105177029 + NM_021930 RINT1 0 . . . 1.63 71.69 19 4.66 No 27 0.98 Yes 0 0 No -22 0.38 No 31 81.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59849894 - NM_032043 BRIP1 0 . . . 4.99 66.92 21 5.1 No 71 0.44 No 0 0 No -20 0.6 No 49 73.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29099893 - NM_001005735 CHEK2 0 . . . 3.28 0 15 4.58 No 60 1.42 Yes 0 0 No -44 0.86 Yes 46 73.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68716738 + NM_133509 RAD51B 0 . . . 2.06 81.77 23 5.18 No 52 0.5 No 0 0 No -25 0.48 No 48 39.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47792790 + NM_000251 MSH2 0 . . . 1.74 68.19 28 5.15 No 25 -1.64 No 0 0 No -27 0.8 Yes 34 54.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108112098 + NM_000051 ATM 0 . . . 2.5 75.11 42 8.88 Yes 0 1.34 Yes 0 0 No -35 0.68 Yes 49 62.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68977427 + NM_133509 RAD51B 0 . . . 0.21 68.08 12 3.62 No 48 -2.7 No 0 0 No -28 0.22 No 48 29.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108162383 + NM_000051 ATM 0 . . . 3.26 74.16 20 5.01 No 5 0.74 No 0 0 No -33 0.46 No 49 80.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94163468 - NM_005591 MRE11 0 . . . 1.83 62.48 18 4.9 No 55 -4.6 No 0 0 No -37 0.43 No 45 49.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190667968 + NM_000534 PMS1 0 . . . 6.19 76.12 19 4.4 No 76 0.8 Yes 0 0 No -32 0.37 No 44 72.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68750222 + NM_133509 RAD51B 0 . . . 1.34 65.12 16 4.81 No 68 1.48 Yes 0 0 No -20 0.8 Yes 51 84.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59931901 - NM_032043 BRIP1 0 . . . 2.24 80.12 21 5.63 Yes 7 1.16 Yes 0 0 No -20 0.46 No 51 80.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75488860 - NM_001040108 MLH3 0 . . . 4.85 70.56 15 4.58 No 18 1.9 Yes 0 0 No -32 0.62 No 40 85.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84401916 - NM_139076 FAM175A 0 . . . 3.36 74.74 19 4.39 No 55 0.85 Yes 0 0 No -18 0.95 Yes 37 38.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89725245 + NM_000314 PTEN 0 . . . 2.09 84.56 55 7.1 Yes 5 0.95 Yes 0 0 No -36 0.92 Yes 44 77.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68971525 + NM_133509 RAD51B 0 . . . 4.07 77.45 45 6.7 Yes 36 0.62 No 0 0 No -29 0.62 No 45 74.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152369492 - NM_005431 XRCC2 0 . . . 0.06 68.48 15 4.86 No 61 0.68 No 0 0 No -26 0.58 No 38 62.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190712157 + NM_000534 PMS1 0 . . . 4.71 78.89 46 5.47 No 41 1.03 Yes 0 0 No -38 0.8 Yes 40 85.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68567535 + NM_133509 RAD51B 0 . . . 3.28 73.1 28 6.85 Yes 30 -2.64 No 0 0 No -27 0.84 Yes 44 33.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131906860 + NM_005732 RAD50 0 . . . 2.28 71.62 17 5.78 Yes 24 0.55 No 0 0 No -25 0.43 No 50 76.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6027000 - NM_000535 PMS2 0 . . . 1.32 72.4 22 4.9 No 8 -1.95 No 0 0 No -20 0.53 No 50 58.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69056390 + NM_133509 RAD51B 0 . . . 3.94 69.56 19 5.83 Yes 24 0.87 Yes 0 0 No -18 0.52 No 41 77.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68530853 + NM_133509 RAD51B 0 . . . 1.82 79.12 30 5.37 No 8 0.79 Yes 0 0 No -25 0.79 Yes 50 64.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68944224 + NM_133509 RAD51B 0 . . . 2.05 76.5 26 4.85 No 29 2.5 Yes 0 0 No -25 0.74 Yes 29 82.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68402514 + NM_133509 RAD51B 0 . . . 1.99 0 24 5.48 No 21 1.5 Yes 0 0 No -23 0.54 No 37 89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68832778 + NM_004360 CDH1 0 . . . 8.21 77.05 29 5.84 Yes 23 -2.01 No 0 0 No -28 0.68 Yes 41 90.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108156192 + NM_000051 ATM 0 . . . 3.37 69.18 18 4.9 No 21 0.38 No 0 0 No -24 0.51 No 44 64.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131919036 + NM_005732 RAD50 0 . . . 3.79 72.06 30 6 Yes -3 0.62 No 0 0 No -29 0.76 Yes 47 61.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108176541 + NM_000051 ATM 0 . . . 0.46 71.23 36 4.48 No 64 -4.6 No 0 0 No -25 0.67 Yes 51 33.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33431441 - NM_002878 RAD51D 0 . . . 1.78 76.63 22 5.1 No 67 -5.67 No 0 0 No -25 0.47 No 48 80 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89672430 + NM_000314 PTEN 0 . . . 2.53 68.96 12 4.24 No 45 0.19 No 0 0 No -25 0.63 No 40 59.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47633795 + NM_000251 MSH2 0 . . . 4.67 78.74 37 6.24 Yes 0 0.18 No 0 0 No -40 0.42 No 52 40.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68675150 + NM_133509 RAD51B 0 . . . 2.45 64.65 29 5.03 No 43 0.92 Yes 0 0 No -28 0.5 No 44 49.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75487444 - NM_001040108 MLH3 0 . . . 1.14 79.37 33 7.81 Yes 59 1.6 Yes 0 0 No -32 0.85 Yes 13 50.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59928911 - NM_032043 BRIP1 0 . . . 2.59 80.84 27 5.63 Yes 0 0.18 No 0 0 No -26 0.5 No 45 66.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94164662 - NM_005591 MRE11 0 . . . 3.83 75.42 35 6.4 Yes 54 1.56 Yes 0 0 No -34 0.71 Yes 49 55.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56783668 + NM_058216 RAD51C 0 . . . 4.76 68.39 40 6.15 Yes 47 0.64 No 0 0 No -39 0.92 Yes 43 53.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6049824 - NM_000535 PMS2 0 . . . 0.07 58.48 38 6.08 Yes 4 0.07 No 0 0 No -30 0.54 No 54 45.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89678582 + NM_000314 PTEN 0 . . . 4.02 74.63 23 5.38 No 55 1 Yes 0 0 No -22 0.41 No 46 68.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108148125 + NM_000051 ATM 0 . . . 8.53 81.92 17 4.08 No 63 1.43 Yes 0 0 No -20 0.65 No 43 59.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68422709 + NM_133509 RAD51B 0 . . . 1.42 75.8 20 4.69 No 72 -2.94 No 0 0 No -19 0.71 Yes 39 46.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131909676 + NM_005732 RAD50 0 . . . 8.36 87.59 38 8.51 Yes 72 -0.13 No 0 0 No -37 0.53 No 44 86.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68343215 + NM_133509 RAD51B 0 . . . 4.02 70.09 15 5.39 No 48 0.76 No 0 0 No -61 0.84 Yes 42 59.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68453923 + NM_133509 RAD51B 0 . . . 1.2 63.71 35 5.87 Yes 33 0.89 Yes 0 0 No -34 0.79 Yes 45 55.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59897028 - NM_032043 BRIP1 0 . . . 9.92 80.73 17 4.74 No 6 1.12 Yes 0 0 No -20 0.22 No 52 70.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108210101 + NM_000051 ATM 0 . . . 7.58 78.12 33 4.57 No 43 1.03 Yes 0 0 No -21 0.47 No 41 68.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69121904 + NM_133509 RAD51B 0 . . . 6.51 82.39 24 4.08 No 46 0.59 No 0 0 No -23 0.75 Yes 52 67.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47728043 + NM_000251 MSH2 0 . . . 0.14 84.22 22 4.69 No 33 0.98 Yes 0 0 No -22 0.78 Yes 25 45.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56810587 + NM_058216 RAD51C 0 . . . 0.27 70.83 26 6.85 Yes 33 1.16 Yes 0 0 No -25 0.82 Yes 25 64.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37046941 + NM_000249 MLH1 0 . . . 8.95 86.51 26 6.22 Yes 63 -3.06 No 0 0 No -25 0.85 Yes 28 59.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108228219 + NM_000051 ATM 0 . . . 3.57 74.54 19 5.3 No 31 0.06 No 0 0 No -31 0.45 No 49 38.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047707 + NM_000249 MLH1 0 . . . 3.25 80.12 25 3.64 No 8 1.06 Yes 0 0 No -24 0.63 No 50 87.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68757148 + NM_133509 RAD51B 0 . . . 0 66.51 24 4.8 No -3 0.22 No 0 0 No -23 0.79 Yes 37 32.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108191534 + NM_000051 ATM 0 . . . 2.97 67.45 18 5.29 No 43 1.41 Yes 0 0 No -22 0.56 No 46 44.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190684196 + NM_000534 PMS1 0 . . . 6.17 80.01 28 5.08 No 7 0.22 No 0 0 No -27 0.32 No 51 57.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47751005 + NM_000251 MSH2 0 . . . 4.96 79.85 23 3.91 No 29 0.27 No 0 0 No -50 0.36 No 45 62.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41008067 + NM_001164269 RAD51 0 . . . 1.7 61.14 31 5.77 Yes 10 0.96 Yes 0 0 No -30 0.83 Yes 48 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68896522 + NM_133509 RAD51B 0 . . . 8.51 85.47 23 5.36 No 48 -1.65 No 0 0 No -23 0.76 Yes 33 86.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68292422 + NM_133509 RAD51B 0 . . . 4.14 84.51 18 4.9 No 3 0.84 Yes 0 0 No -17 0.45 No 45 69.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32905586 + NM_000059 BRCA2 0 . . . 2.59 74.78 23 5.29 No 50 0.64 No 0 0 No -23 0.69 Yes 47 91.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215645618 - NM_000465 BARD1 0 . . . 1.77 61.52 24 5.73 Yes 37 0.07 No 0 0 No -28 0.51 No 45 28.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108239511 + NM_000051 ATM 0 . . . 1.11 76.81 22 5.29 No 47 0.19 No 0 0 No -21 0.92 Yes 13 32.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37076180 + NM_000249 MLH1 0 . . . 1.27 76.63 13 5.2 No 67 -4.95 No 0 0 No -22 0.71 Yes 43 55.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68854125 + NM_004360 CDH1 0 . . . 2.7 80.69 34 6.96 Yes 67 0.1 No 0 0 No -33 0.48 No 47 77.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131953660 + NM_005732 RAD50 0 . . . 0.36 70.98 21 4.9 No -3 0.42 No 0 0 No -20 0.83 Yes 50 52.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68539060 + NM_133509 RAD51B 0 . . . 0.24 0 22 5.26 No 28 -3.89 No 0 0 No -26 0.69 Yes 34 49.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105207869 + NM_021930 RINT1 0 . . . 0.09 61.93 18 5.66 Yes 61 -4.37 No 0 0 No -60 0.28 No 48 68.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152348066 - NM_005431 XRCC2 0 . . . 1.74 0 25 7.14 Yes 63 -4.2 No 0 0 No -24 0.93 Yes 49 36.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131959415 + NM_005732 RAD50 0 . . . 7.46 93.71 21 6.16 Yes 21 0.03 No 0 0 No -18 0.62 No 37 96.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68285823 + NM_133509 RAD51B 0 . . . 0.64 71.23 37 6.56 Yes 68 -0.27 No 0 0 No -36 0.7 Yes 56 34.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68781354 + NM_133509 RAD51B 0 . . . 0.04 69.03 28 5.68 Yes 47 0.58 No 0 0 No -20 0.34 No 43 50.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68924434 + NM_133509 RAD51B 0 . . . 1.08 84.22 49 9.02 Yes 33 0.98 Yes 0 0 No -28 0.49 No 25 45.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68778775 + NM_004360 CDH1 0 . . . 4.99 71.14 31 6.91 Yes 21 0.11 No 0 0 No -30 0.66 No 37 71.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59926745 - NM_032043 BRIP1 0 . . . 3.91 60.57 22 5.66 Yes 22 0.18 No 0 0 No -25 0.45 No 44 68.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48032016 + NM_000179 MSH6 0 . . . 2.45 76.72 21 5.66 Yes 65 0.13 No 30 0.75 Yes -20 0.62 No 51 62.03 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 59784060 - NM_032043 BRIP1 0 . . . 4.1 84.79 17 5.57 Yes 75 -6.39 No 0 0 No -16 0.71 Yes 48 84.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47668592 + NM_000251 MSH2 0 . . . 2.12 76.47 22 4.9 No 32 0.4 No 0 0 No -21 0.73 Yes 50 77.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56791730 + NM_058216 RAD51C 0 . . . 6.03 71.95 17 4.31 No 22 0.33 No 0 0 No -16 0.72 Yes 36 75.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108097923 + NM_000051 ATM 0 . . . 3.6 85.02 25 4.62 No 4 1.2 Yes 0 0 No -24 0.52 No 44 65.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94195644 - NM_005591 MRE11 0 . . . 8.29 85.9 15 4.38 No 2 0.81 Yes 0 0 No -19 0.62 No 49 73.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68553024 + NM_133509 RAD51B 0 . . . 7.79 83.86 13 4.23 No 11 -0.37 No 0 0 No -29 0.3 No 44 76.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68605104 + NM_133509 RAD51B 0 . . . 4.44 80.74 27 8.13 Yes 7 0.17 No 0 0 No -26 0.78 Yes 43 61.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68742926 + NM_133509 RAD51B 0 . . . 3.23 77.38 24 6.73 Yes 51 0.06 No 0 0 No -23 0.67 Yes 47 70.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190718590 + NM_000534 PMS1 0 . . . 4.77 77.39 21 5 No 30 1.09 Yes 0 0 No -20 0.61 No 40 89.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48034625 + NM_000179 MSH6 0 . . . 1.58 62.22 29 5.92 Yes 33 0.95 Yes 0 0 No -31 0.62 No 50 57.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68950100 + NM_133509 RAD51B 0 . . . 0.65 0 40 6.22 Yes 43 -3.56 No 0 0 No -27 0.51 No 48 44.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68421899 + NM_133509 RAD51B 0 . . . 0.29 0 46 6.53 Yes 22 0.66 No 0 0 No -20 0.38 No 36 90.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41267410 - NM_007294 BRCA1 0 . . . 1.8 0 21 7.21 Yes 41 1.1 Yes 0 0 No -20 0.82 Yes 42 39.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215675640 - NM_000465 BARD1 0 . . . 5.52 67.62 10 4.69 No 13 0.27 No 0 0 No -28 0.47 No 42 56.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190714174 + NM_000534 PMS1 0 . . . 8.04 77.48 27 5.21 No 9 1.41 Yes 0 0 No -26 0.5 No 49 62.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69073506 + NM_133509 RAD51B 0 . . . 1.19 75 28 5.35 No 27 0.44 No 0 0 No -28 0.4 No 47 80.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68781222 + NM_133509 RAD51B 0 . . . 3.88 77.71 31 4.4 No 16 0.93 Yes 0 0 No -30 0.53 No 47 55.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68941057 + NM_133509 RAD51B 0 . . . 0.16 62.88 23 4.8 No 44 -0.57 No 0 0 No -22 0.83 Yes 50 54.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68750777 + NM_133509 RAD51B 0 . . . 8.76 83.16 36 4.98 No 13 1.24 Yes 0 0 No -35 0.69 Yes 45 84.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32909749 + NM_000059 BRCA2 0 . . . 6.1 80.81 13 4.89 No 25 1.78 Yes 0 0 No -17 0.5 No 33 92.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37072009 + NM_000249 MLH1 0 . . . 1.12 73.73 24 7.1 Yes 58 -3.9 No 0 0 No -23 0.5 No 48 38.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68683506 + NM_133509 RAD51B 0 . . . 1.38 64.49 61 5.2 No 35 0.31 No 0 0 No -32 0.78 Yes 16 68.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68741914 + NM_133509 RAD51B 0 . . . 0.15 0 52 5.25 No 69 0.19 No 0 0 No -47 0.57 No 47 79.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215660445 - NM_000465 BARD1 0 . . . 0.03 61.03 18 4.9 No 67 0.38 No 0 0 No -46 0.52 No 45 62.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59800856 - NM_032043 BRIP1 0 . . . 0.11 68.67 19 4.34 No 51 0.57 No 0 0 No -22 0.5 No 50 77.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37057450 + NM_000249 MLH1 0 . . . 5.52 84.96 30 5.24 No 47 -1.8 No 0 0 No -24 0.73 Yes 49 72.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190716273 + NM_000534 PMS1 0 . . . 1.51 57.98 24 5.46 No 40 0.64 No 0 0 No -23 0.91 Yes 18 40.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68795302 + NM_133509 RAD51B 0 . . . 5.56 76.15 14 4.47 No 64 -1.77 No 0 0 No -18 0.61 No 46 77.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90998145 - NM_002485 NBN 0 . . . 8.8 89.52 42 6.62 Yes 76 0.66 No 0 0 No -25 0.78 Yes 44 64.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190708573 + NM_000534 PMS1 0 . . . 2.89 69.42 26 6.4 Yes 4 0.59 No 0 0 No -25 0.35 No 47 81.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41277689 - NM_007294 BRCA1 0 . . . 4.94 79.86 29 5.66 Yes 0 1.13 Yes 0 0 No -28 0.68 Yes 48 40.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108240951 + NM_000051 ATM 0 . . . 0.84 79.68 27 5.2 No 37 1.08 Yes 0 0 No -55 0.95 Yes 47 93.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68793250 + NM_004360 CDH1 0 . . . 1.29 55.45 22 5.16 No 53 -1.94 No 0 0 No -21 0.5 No 41 52.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29086690 - NM_001005735 CHEK2 0 . . . 1.49 81.72 23 3.98 No 3 0.81 Yes 0 0 No -22 0.62 No 50 86.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68475148 + NM_133509 RAD51B 0 . . . 1.58 68.77 16 4.69 No 24 0.56 No 0 0 No -31 0.34 No 38 55.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215620853 - NM_000465 BARD1 0 . . . 3.44 74.9 27 5.67 Yes 13 0.61 No 0 0 No -26 0.56 No 52 39.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59776978 - NM_032043 BRIP1 0 . . . 3.81 86.2 14 5.26 No 3 0.94 Yes 0 0 No -14 0.6 No 48 41.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105190908 + NM_021930 RINT1 0 . . . 0.81 77.38 17 4.24 No 50 0.04 No 0 0 No -56 0.59 No 48 83.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68399255 + NM_133509 RAD51B 0 . . . 8.99 91.15 11 5 No 72 1.05 Yes 0 0 No -28 0.63 No 45 56.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6034343 - NM_000535 PMS2 0 . . . 0 61.67 24 5.39 No -4 0.7 No 0 0 No -23 0.48 No 43 57.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68430366 + NM_133509 RAD51B 0 . . . 3.6 74.82 19 5.5 No 16 1.52 Yes 0 0 No -26 0.4 No 42 81.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68650232 + NM_133509 RAD51B 0 . . . 3.95 75.33 10 3.32 No 24 1.77 Yes 0 0 No -27 0.7 Yes 34 72.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68856374 + NM_004360 CDH1 0 . . . 1.92 0 27 5.04 No 22 0.28 No 0 0 No -26 0.86 Yes 43 37.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84389800 - NM_139076 FAM175A 0 . . . 5.95 80.99 12 5.48 No 50 -2.46 No 0 0 No -25 0.36 No 47 70.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68316235 + NM_133509 RAD51B 0 . . . 5.71 83.46 25 4.84 No 9 0.93 Yes 0 0 No -24 0.59 No 49 87.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68832834 + NM_133509 RAD51B 0 . . . 5.31 67.81 17 5.4 No 10 0.91 Yes 0 0 No -23 0.95 Yes 42 62.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1210312 + NM_000455 STK11 0 . . . 4.53 64.12 24 3.88 No 56 -0.19 No 0 0 No -23 0.94 Yes 40 35.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89688386 + NM_000314 PTEN 0 . . . 7.87 77.23 35 5.95 Yes 23 1.49 Yes 0 0 No -34 0.83 Yes 35 61.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75513857 - NM_001040108 MLH3 0 . . . 1.88 80.59 31 5.82 Yes 14 0.81 Yes 0 0 No -30 0.91 Yes 48 77.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29113486 - NM_001005735 CHEK2 0 . . . 2.19 81.72 19 5 No 8 0.62 No 0 0 No -42 0.46 No 50 92.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68775166 + NM_133509 RAD51B 0 . . . 0.44 62.68 18 3.58 No 26 -2.41 No 0 0 No -29 0.58 No 33 47.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75507052 - NM_001040108 MLH3 0 . . . 5.95 83.64 29 5.94 Yes 33 0.9 Yes 0 0 No -28 0.83 Yes 50 90.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89630400 + NM_000314 PTEN 0 . . . 1.65 73.85 27 4.57 No 59 0.52 No 0 0 No -26 0.45 No 50 69.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108137455 + NM_000051 ATM 0 . . . 0.04 68 44 7.3 Yes 68 0.48 No 0 0 No -28 0.62 No 42 61.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131914925 + NM_005732 RAD50 0 . . . 7.25 83.29 34 5.24 No 28 1.22 Yes 0 0 No -18 0.47 No 42 69.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68850828 + NM_133509 RAD51B 0 . . . 0.58 0 26 5.29 No 64 1.19 Yes 0 0 No -25 0.84 Yes 48 77.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47679820 + NM_000251 MSH2 0 . . . 3.17 67.4 23 4.55 No 76 -5.35 No 0 0 No -25 0.44 No 38 78.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37087300 + NM_000249 MLH1 0 . . . 1.3 0 15 5.19 No 3 1.76 Yes 0 0 No -18 0.62 No 49 78.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75513877 - NM_001040108 MLH3 0 . . . 1.66 78.27 13 5.48 No 66 1.58 Yes 0 0 No -29 0.33 No 50 28.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152357739 - NM_005431 XRCC2 0 . . . 2.89 73.04 29 5.23 No 56 1.06 Yes 0 0 No -18 0.43 No 43 51.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215589750 - NM_000465 BARD1 0 . . . 3.35 69.69 51 5.03 No 36 1.84 Yes 0 0 No -25 0.41 No 15 36.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90997485 - NM_002485 NBN 0 . . . 0.05 78.55 27 5.15 No 70 1.09 Yes 0 0 No -21 0.64 No 53 49.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94155376 - NM_005591 MRE11 0 . . . 3.69 72.59 15 3.8 No 24 1.31 Yes 0 0 No -26 0.73 Yes 34 88.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131891390 + NM_005732 RAD50 0 . . . 6.58 92.4 30 5.39 No 5 1.22 Yes 0 0 No -29 0.6 No 53 80.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68914256 + NM_133509 RAD51B 0 . . . 2.79 77.7 17 6.13 Yes 10 0.48 No 0 0 No -27 0.45 No 42 83.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131969259 + NM_005732 RAD50 0 . . . 6.16 81.42 41 5.97 Yes 8 1.32 Yes 0 0 No -28 0.49 No 45 80.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68536968 + NM_133509 RAD51B 0 . . . 8.47 87.08 45 5.96 Yes 1 0.36 No 0 0 No -50 0.73 Yes 44 90.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47691771 + NM_000251 MSH2 0 . . . 5.33 91.29 14 4.12 No 63 0.63 No 0 0 No -13 0.64 No 46 91.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29139522 - NM_001005735 CHEK2 0 . . . 3.59 75.67 39 5.9 Yes 0 0.24 No 0 0 No -24 0.57 No 45 75.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68666440 + NM_133509 RAD51B 0 . . . 9.61 83.06 18 6.48 Yes 59 1.09 Yes 0 0 No -13 0.44 No 53 82.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69014102 + NM_133509 RAD51B 0 . . . 5.38 76.33 23 3.76 No 46 1.22 Yes 0 0 No -30 0.51 No 42 68.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59814033 - NM_032043 BRIP1 0 . . . 0.43 57.73 24 5.29 No 21 0.37 No 0 0 No -23 0.82 Yes 50 65.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68870429 + NM_004360 CDH1 0 . . . 2.45 73.58 32 5.57 Yes 38 1.45 Yes 0 0 No -31 0.48 No 44 36.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68515262 + NM_133509 RAD51B 0 . . . 4.18 70.73 15 5.74 Yes 36 -1.4 No 0 0 No -50 0.6 No 47 62.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68856671 + NM_133509 RAD51B 0 . . . 3.73 67.58 9 7.75 Yes 37 1.19 Yes 0 0 No -22 0.18 No 41 58.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68312841 + NM_133509 RAD51B 0 . . . 6.04 70.47 28 5.48 No 62 -1.15 No 0 0 No -54 0.45 No 36 68.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131961935 + NM_005732 RAD50 0 . . . 2.26 68.93 16 4.47 No 39 -3.75 No 0 0 No -55 0.5 No 37 58.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68961113 + NM_133509 RAD51B 0 . . . 4.68 86.81 24 5.83 Yes 24 0.98 Yes 0 0 No -24 0.64 No 51 71.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48030909 + NM_000179 MSH6 0 . . . 4.31 80.36 9 5.48 No 66 0.56 No 0 0 No -21 0.4 No 47 90.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69099966 + NM_133509 RAD51B 0 . . . 4.92 67.14 23 5.39 No 67 1.14 Yes 0 0 No -22 0.57 No 44 54.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59886261 - NM_032043 BRIP1 0 . . . 1.95 67.32 22 5.29 No -4 0.1 No 0 0 No -36 0.77 Yes 43 78.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89703256 + NM_000314 PTEN 0 . . . 5.27 71.29 19 4.79 No 47 0.45 No 0 0 No -18 0.51 No 11 71.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108149323 + NM_000051 ATM 0 . . . 1.53 67.85 55 7.73 Yes 60 -2.38 No 0 0 No -59 0.42 No 40 73.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47786399 + NM_000251 MSH2 0 . . . 2.33 72.4 16 4.18 No 17 0.23 No 0 0 No -21 0.74 Yes 41 52.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1223543 + NM_000455 STK11 0 . . . 0.26 71.97 24 5.29 No 67 -4.19 No 0 0 No -23 0.52 No 55 50.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68362976 + NM_133509 RAD51B 0 . . . 3.55 75.92 22 6.85 Yes 24 0.72 No 0 0 No -21 0.97 Yes 34 95.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68309384 + NM_133509 RAD51B 0 . . . 2.86 69.16 18 4.9 No 57 1.47 Yes 0 0 No -37 0.45 No 48 78.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68622223 + NM_133509 RAD51B 0 . . . 6.12 85.55 20 4.81 No 67 0.71 No 0 0 No -34 0.37 No 42 53.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69101618 + NM_133509 RAD51B 0 . . . 1.8 65.54 26 5.86 Yes -4 0.43 No 0 0 No -25 0.52 No 48 44.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59905373 - NM_032043 BRIP1 0 . . . 3.77 72.8 22 6.67 Yes 2 1.1 Yes 0 0 No -30 0.55 No 50 60.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69145747 + NM_133509 RAD51B 0 . . . 2.04 71.74 17 4.04 No 62 3.07 Yes 0 0 No -27 0.65 No 52 24.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47803604 + NM_000251 MSH2 0 . . . 3.15 76 43 6.56 Yes 12 0.6 No 0 0 No -42 0.61 No 46 74.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69054029 + NM_133509 RAD51B 0 . . . 6.4 76.05 31 5.04 No 29 1.16 Yes 0 0 No -30 0.82 Yes 45 75.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68358698 + NM_133509 RAD51B 0 . . . 1.1 67.62 19 5 No 53 0.45 No 0 0 No -23 0.88 Yes 57 18.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23615370 - NM_024675 PALB2 0 . . . 2.82 73.91 29 5.11 No 9 1.54 Yes 0 0 No -28 0.74 Yes 49 70.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68829685 + NM_133509 RAD51B 0 . . . 5.84 76.23 37 6.91 Yes 53 1.36 Yes 0 0 No -36 0.46 No 39 69.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47633367 + NM_000251 MSH2 0 . . . 1.08 84.22 28 5.5 No 33 1.17 Yes 0 0 No -33 0.45 No 25 44.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68609092 + NM_133509 RAD51B 0 . . . 6.75 78.28 18 3.93 No 68 0.82 Yes 0 0 No -17 0.75 Yes 45 82.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32942968 + NM_000059 BRCA2 0 . . . 11.51 87.64 25 5.39 No 56 0.95 Yes 0 0 No -22 0.78 Yes 21 26.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108145168 + NM_000051 ATM 0 . . . 9.49 81.08 24 5.92 Yes 47 1.34 Yes 0 0 No -23 0.48 No 37 72.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68683020 + NM_133509 RAD51B 0 . . . 4.51 72.45 14 5.1 No 6 0.87 Yes 0 0 No -22 0.6 No 41 59.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108098842 + NM_000051 ATM 0 . . . 4.5 62.7 41 7.2 Yes -1 0.26 No 0 0 No -26 0.74 Yes 33 53.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84395445 - NM_139076 FAM175A 0 . . . 3.34 63.27 33 6.63 Yes 47 0.79 Yes 0 0 No -32 0.65 No 49 75.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59895648 - NM_032043 BRIP1 0 . . . 1.77 65.97 24 4.76 No 64 0.22 No 0 0 No -23 0.28 No 47 55.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68981224 + NM_133509 RAD51B 0 . . . 5.53 80 28 5.36 No 23 0.56 No 0 0 No -27 0.73 Yes 43 52.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131900969 + NM_005732 RAD50 0 . . . 3.92 74.51 16 4.54 No 59 0.77 No 0 0 No -26 0.54 No 47 75.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190733794 + NM_000534 PMS1 0 . . . 11.19 85.59 21 4.49 No 31 1.41 Yes 0 0 No -18 0.59 No 42 43.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29103032 - NM_001005735 CHEK2 0 . . . 6.9 81.6 31 5.74 Yes 41 1.22 Yes 0 0 No -33 0.45 No 45 62.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900668 + NM_133509 RAD51B 0 . . . 7.69 80.35 27 4.71 No 42 -1.35 No 0 0 No -44 0.45 No 50 58.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6019076 - NM_000535 PMS2 0 . . . 0.97 78.31 22 4.8 No 44 0.68 No 0 0 No -21 0.93 Yes 57 33.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215643785 - NM_000465 BARD1 0 . . . 0.33 58.73 23 7.28 Yes 3 0.48 No 0 0 No -22 0.88 Yes 59 42.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32942029 + NM_000059 BRCA2 0 . . . 0.22 60.42 22 5.1 No 14 0.32 No 0 0 No -24 0.82 Yes 25 58.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59888850 - NM_032043 BRIP1 0 . . . 0.65 74.23 33 5.92 Yes 74 0.53 No 0 0 No -32 0.87 Yes 54 83.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68821663 + NM_004360 CDH1 0 . . . 2.41 68.95 19 5.78 Yes 16 0.97 Yes 0 0 No -18 0.52 No 42 91.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215611279 - NM_000465 BARD1 0 . . . 5.44 86.51 12 4.24 No 70 1.04 Yes 0 0 No -23 0.77 Yes 31 40.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68584113 + NM_133509 RAD51B 0 . . . 3.22 71.22 18 4.74 No 44 -4.16 No 0 0 No -22 0.5 No 48 47.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41234846 - NM_007294 BRCA1 0 . . . 0.89 66 21 4.69 No 26 0.74 No 0 0 No -20 0.9 Yes 21 40.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59931158 - NM_032043 BRIP1 0 . . . 0.04 65.19 19 4.91 No 60 0.86 Yes 0 0 No -40 0.59 No 42 51.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59764435 - NM_032043 BRIP1 0 . . . 7.77 80.59 19 5 No 11 0.64 No 0 0 No -41 0.74 Yes 47 96.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108225599 + NM_000051 ATM 0 . . . 5.28 72.48 20 5.86 Yes 66 0.66 No 0 0 No -24 0.92 Yes 46 90.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104183220 - NM_001100119 XRCC3 0 . . . 4.36 68 32 5.86 Yes 7 -2.04 No 0 0 No -21 0.72 Yes 19 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215628835 - NM_000465 BARD1 0 . . . 1.26 63.83 22 4.69 No 55 -1.35 No 0 0 No -21 0.79 Yes 20 32.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69081550 + NM_133509 RAD51B 0 . . . 3.96 76.29 80 5.71 Yes 56 0.35 No 0 0 No -37 0.9 Yes 44 46.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190740166 + NM_000534 PMS1 0 . . . 7.17 87.94 23 5.39 No 73 -1.41 No 0 0 No -22 0.75 Yes 46 80.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68616096 + NM_133509 RAD51B 0 . . . 4.9 77.43 32 6 Yes 1 0.64 No 0 0 No -29 0.6 No 46 53.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47700573 + NM_000251 MSH2 0 . . . 0.12 65.94 17 3.55 No 48 1.4 Yes 0 0 No -19 0.85 Yes 41 45.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37042838 + NM_000249 MLH1 0 . . . 5.27 70.13 27 4.34 No 0 1.07 Yes 0 0 No -21 0.48 No 45 51.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47687615 + NM_000251 MSH2 0 . . . 4.34 77.97 25 6.33 Yes 3 0.08 No 0 0 No -27 0.61 No 45 45.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32927595 + NM_000059 BRCA2 0 . . . 5.37 77.69 36 8.27 Yes 16 0.13 No 0 0 No -35 0.58 No 42 83.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68690264 + NM_133509 RAD51B 0 . . . 0.93 70.8 20 5.83 Yes 72 0.71 No 0 0 No -19 0.49 No 48 95.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29108128 - NM_001005735 CHEK2 0 . . . 9.18 84.61 32 5.54 No 60 1.19 Yes 0 0 No -24 0.58 No 50 72.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69066639 + NM_133509 RAD51B 0 . . . 5.88 84.46 29 5.56 Yes 58 0.53 No 0 0 No -28 0.67 Yes 46 51.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89697325 + NM_000314 PTEN 0 . . . 4.47 78.53 59 8.02 Yes 23 1.16 Yes 0 0 No -22 0.63 No 49 73.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108100665 + NM_000051 ATM 0 . . . 3.65 78.25 31 5.11 No 29 0.95 Yes 0 0 No -20 0.66 No 48 79.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1227627 + NM_000455 STK11 0 . . . 1.12 74.96 33 5.63 Yes 53 2.4 Yes 0 0 No -25 0.83 Yes 55 12.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68778377 + NM_004360 CDH1 0 . . . 3.75 69.86 19 4.78 No 58 2.07 Yes 0 0 No -25 0.75 Yes 28 80.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47763644 + NM_000251 MSH2 0 . . . 5.37 75.73 15 5.48 No 63 -2.62 No 0 0 No -23 0.85 Yes 45 90.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89623795 + NM_000314 PTEN 0 . . . 8.34 85.84 44 8.04 Yes 10 1.13 Yes 0 0 No -33 0.73 Yes 48 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7586466 - NM_000546 TP53 0 . . . 2.1 76.63 16 5.83 Yes 64 -4.77 No 0 0 No -15 0.25 No 47 37.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33446725 - NM_002878 RAD51D 0 . . . 12.28 86.22 35 6.38 Yes 67 1.32 Yes 0 0 No -34 0.8 Yes 48 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68526008 + NM_133509 RAD51B 0 . . . 4.79 75.14 36 6.08 Yes 34 1.31 Yes 0 0 No -28 0.67 Yes 35 54.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94170780 - NM_005591 MRE11 0 . . . 3.97 67.72 19 4.83 No 58 -4.87 No 0 0 No -18 0.78 Yes 48 27.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108141674 + NM_000051 ATM 0 . . . 4.43 84.11 26 5.16 No 11 1.66 Yes 0 0 No -25 0.81 Yes 47 76.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47793709 + NM_000251 MSH2 0 . . . 6.25 81.89 22 5.94 Yes 10 -1.09 No 0 0 No -21 0.9 Yes 48 74.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68791740 + NM_004360 CDH1 0 . . . 6.57 91.83 9 3.87 No 14 -0.12 No 0 0 No -21 0.63 No 44 70.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52436358 - NM_004656 BAP1 0 . . . 1.86 67.97 21 13.86 Yes 12 -1.73 No 0 0 No -25 0.54 No 44 22.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47776959 + NM_000251 MSH2 0 . . . 2.36 69.98 31 6.31 Yes 53 0.63 No 0 0 No -30 0.93 Yes 46 42.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89702798 + NM_000314 PTEN 0 . . . 2.79 72.99 14 5 No 68 -3.29 No 0 0 No -44 0.33 No 48 50.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7567575 - NM_000546 TP53 0 . . . 2.4 69.77 17 5.15 No 60 -3.78 No 0 0 No -16 0.52 No 50 33.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131981492 + NM_005732 RAD50 0 . . . 1.99 74.92 39 6.04 Yes 5 -1.95 No 0 0 No -31 0.47 No 53 68.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108149491 + NM_000051 ATM 0 . . . 9.57 90.97 25 5.51 No 7 1.5 Yes 0 0 No -24 0.57 No 51 71.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68684176 + NM_133509 RAD51B 0 . . . 3.22 74.29 21 5.66 Yes 5 0.93 Yes 0 0 No -20 0.8 Yes 41 70.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68396719 + NM_133509 RAD51B 0 . . . 2.54 67.74 13 3.87 No 16 0.7 No 0 0 No -12 0.77 Yes 42 58.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32966488 + NM_000059 BRCA2 0 . . . 6.92 87.51 19 5 No 44 0.71 No 0 0 No -57 0.56 No 42 66.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69067942 + NM_133509 RAD51B 0 . . . 1.62 74.42 28 5 No 6 0.26 No 0 0 No -29 0.68 Yes 52 80.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108177849 + NM_000051 ATM 0 . . . 9.3 90.55 22 4.8 No 10 1.42 Yes 0 0 No -25 0.52 No 48 81.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68583419 + NM_133509 RAD51B 0 . . . 2.67 0 30 5.48 No 74 0.04 No 0 0 No -29 0.59 No 53 51.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7582367 - NM_000546 TP53 0 . . . 0.17 74.68 32 6.15 Yes 64 1.1 Yes 0 0 No -37 0.79 Yes 46 53.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59916003 - NM_032043 BRIP1 0 . . . 2.95 69.38 48 7.58 Yes 7 1.11 Yes 0 0 No -38 0.62 No 50 60.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56787076 + NM_058216 RAD51C 0 . . . 8.5 91.4 20 4.28 No 23 1.33 Yes 0 0 No -31 0.89 Yes 35 67.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29105523 - NM_001005735 CHEK2 0 . . . 1.35 0 12 4.24 No 43 1.26 Yes 0 0 No -17 0.39 No 15 58.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68720797 + NM_133509 RAD51B 0 . . . 3 0 34 6.93 Yes 40 0.85 Yes 0 0 No -33 0.81 Yes 18 69.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94188183 - NM_005591 MRE11 0 . . . 9.66 95.8 43 6.03 Yes 68 -4.33 No 0 0 No -27 0.87 Yes 50 74.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59859982 - NM_032043 BRIP1 0 . . . 0.38 72.51 14 3.72 No 70 0.46 No 0 0 No -21 0.89 Yes 48 76.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108221750 + NM_000051 ATM 0 . . . 3.26 74.36 18 5.58 Yes 17 0.01 No 0 0 No -26 0.72 Yes 63 19.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215636425 - NM_000465 BARD1 0 . . . 3.61 84.17 23 4.62 No 14 0.36 No 0 0 No -23 0.74 Yes 21 67.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68669534 + NM_133509 RAD51B 0 . . . 6.13 79.91 15 5.16 No 57 1.13 Yes 0 0 No -22 0.53 No 43 55.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104164827 - NM_001100119 XRCC3 0 . . . 3.39 72.72 22 4.69 No 43 -2.42 No 0 0 No -21 0.92 Yes 43 84.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47714334 + NM_000251 MSH2 0 . . . 2.65 72.78 36 4.62 No 22 1.39 Yes 0 0 No -41 0.42 No 22 40.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104171616 - NM_001100119 XRCC3 0 . . . 0.49 0 10 4.88 No 41 1.36 Yes 0 0 No -25 0.58 No 45 51.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23613450 - NM_024675 PALB2 0 . . . 2.31 71.02 19 5 No 70 -5 No 0 0 No -18 0.42 No 48 37.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108181397 + NM_000051 ATM 0 . . . 4.28 86.01 35 4.88 No 7 0.4 No 0 0 No -34 0.61 No 42 40.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68835203 + NM_004360 CDH1 0 . . . 4.02 80.12 25 5.37 No 21 1.31 Yes 0 0 No -22 0.84 Yes 47 69.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190721227 + NM_000534 PMS1 0 . . . 4.41 73.72 32 8.3 Yes 64 0.9 Yes 0 0 No -31 0.7 Yes 35 70.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68647031 + NM_133509 RAD51B 0 . . . 6.9 90.63 54 7.61 Yes 46 2.49 Yes 0 0 No -30 0.35 No 35 69.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29084532 - NM_001005735 CHEK2 0 . . . 0.93 80.49 28 5.2 No 57 0.97 Yes 0 0 No -27 0.8 Yes 44 68.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6027353 - NM_000535 PMS2 0 . . . 5.09 65.45 13 4.36 No 12 0.86 Yes 0 0 No -31 0.34 No 46 43.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68558403 + NM_133509 RAD51B 0 . . . 4.96 91.21 14 4.47 No 12 1.32 Yes 0 0 No -14 0.46 No 46 93.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21966474 - NM_000077 CDKN2A 0 . . . 8.99 79.88 16 4.95 No 30 -0.73 No 0 0 No -20 0.79 Yes 39 66.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68385326 + NM_133509 RAD51B 0 . . . 1.63 66.45 47 6.77 Yes 14 0.47 No 0 0 No -26 0.34 No 44 74.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37033545 + NM_000249 MLH1 0 . . . 3.69 73.24 36 8.4 Yes 55 0.8 Yes 0 0 No -35 0.36 No 45 49.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68868209 + NM_133509 RAD51B 0 . . . 6.41 88.67 13 4.36 No 3 2.16 Yes 0 0 No -49 0.38 No 48 59.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68820928 + NM_004360 CDH1 0 . . . 2.04 68.24 18 4.9 No 48 1.26 Yes 0 0 No -17 0.87 Yes 50 42.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94224274 - NM_005591 MRE11 0 . . . 3.56 76.35 20 4.88 No 4 0.03 No 0 0 No -19 0.83 Yes 48 76.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68824098 + NM_133509 RAD51B 0 . . . 0.88 75.88 20 5.1 No 42 1.59 Yes 0 0 No -30 0.43 No 16 83.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89731430 + NM_000314 PTEN 0 . . . 5.7 76.59 20 5.49 No 74 0.25 No 0 0 No -25 0.39 No 40 75.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68457565 + NM_133509 RAD51B 0 . . . 1.34 82.1 29 5.57 Yes 71 -6.23 No 0 0 No -29 0.75 Yes 52 45.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59904520 - NM_032043 BRIP1 0 . . . 5.75 73.39 30 5.5 No 50 0.88 Yes 0 0 No -33 0.39 No 45 63.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131892540 + NM_005732 RAD50 0 . . . 5.19 69.79 22 5.29 No 50 -0.14 No 0 0 No -29 0.86 Yes 47 23.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108121090 + NM_000051 ATM 0 . . . 0.42 74.73 36 5.88 Yes 33 1.17 Yes 0 0 No -35 0.58 No 25 30.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59881406 - NM_032043 BRIP1 0 . . . 0.03 67 22 4.58 No 76 0.21 No 0 0 No -41 0.65 No 41 80.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68549126 + NM_133509 RAD51B 0 . . . 2.34 0 17 4.35 No 4 0.77 Yes 0 0 No -16 0.56 No 16 54.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190716982 + NM_000534 PMS1 0 . . . 3.03 83.87 31 5.92 Yes 68 -5.02 No 0 0 No -31 0.66 No 54 43.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68518947 + NM_133509 RAD51B 0 . . . 8.19 83.37 25 5.39 No 73 -4.39 No 0 0 No -22 0.7 Yes 49 66.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84380132 - NM_139076 FAM175A 0 . . . 5.24 80.12 20 6.58 Yes 7 1.02 Yes 0 0 No -27 0.62 No 46 77.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21969187 - NM_000077 CDKN2A 0 . . . 0.03 67.59 33 6.01 Yes 27 -3.54 No 0 0 No -19 0.71 Yes 49 94.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108147028 + NM_000051 ATM 0 . . . 3.05 65.16 19 7.8 Yes 28 2.26 Yes 0 0 No -23 0.42 No 49 87.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41246913 - NM_007294 BRCA1 0 . . . 2.73 67.82 36 5.66 Yes 39 0.51 No 26 0.63 Yes -18 0.41 No 38 52.11 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68876727 + NM_133509 RAD51B 0 . . . 8.05 79.31 28 5.2 No 76 1.12 Yes 0 0 No -27 0.62 No 43 79.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56806432 + NM_058216 RAD51C 0 . . . 1.47 62.86 19 6.34 Yes 3 0.96 Yes 0 0 No -22 0.32 No 24 38.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47789227 + NM_000251 MSH2 0 . . . 9.14 76.55 39 5.31 No 14 2.17 Yes 22 0.94 Yes -28 0.67 Yes 48 76.33 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr11 108110172 + NM_000051 ATM 0 . . . 0.48 68.52 15 4.26 No 5 0.74 No 0 0 No -26 0.54 No 44 78.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47650904 + NM_000251 MSH2 0 . . . 7.64 80.73 17 4.7 No 2 1.05 Yes 0 0 No -27 0.71 Yes 44 51.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94208274 - NM_005591 MRE11 0 . . . 3.59 83.76 21 4.9 No 75 0.73 No 0 0 No -20 0.92 Yes 46 83.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215670704 - NM_000465 BARD1 0 . . . 6.31 80.04 24 5.49 No 2 0.97 Yes 0 0 No -23 0.28 No 47 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32952506 + NM_000059 BRCA2 0 . . . 0.56 72.43 24 5.48 No 0 0.73 No 0 0 No -24 0.66 No 48 71.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94222982 - NM_005591 MRE11 0 . . . 3.07 62.49 17 5.57 Yes 20 0.54 No 0 0 No -16 0.69 Yes 38 87.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68316899 + NM_133509 RAD51B 0 . . . 4.83 75.45 32 5.37 No 9 1.17 Yes 0 0 No -31 0.32 No 49 91.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152367465 - NM_005431 XRCC2 0 . . . 8.12 82.81 34 5.54 No 59 0.56 No 0 0 No -33 0.31 No 17 56.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68795104 + NM_133509 RAD51B 0 . . . 0.91 0 31 5.74 Yes -1 -0.99 No 0 0 No -30 0.9 Yes 60 58.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68770691 + NM_004360 CDH1 0 . . . 5.71 73.94 12 5.2 No NA NA NA 0 0 No -20 0.5 No 31 53.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6043374 - NM_000535 PMS2 0 . . . 2.17 74.7 29 6.24 Yes 57 0.91 Yes 0 0 No -28 0.65 No 47 20.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152343457 - NM_005431 XRCC2 0 . . . 2.65 77.18 33 7.12 Yes 47 -2.81 No 0 0 No -32 0.75 Yes 53 66.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94206409 - NM_005591 MRE11 0 . . . 5.67 72.71 76 7.44 Yes 2 0.73 No 0 0 No -22 0.9 Yes 43 66.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68392669 + NM_133509 RAD51B 0 . . . 1.32 69.68 15 4.58 No 56 1 Yes 0 0 No -14 0.29 No 50 44.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56807621 + NM_058216 RAD51C 0 . . . 5.96 78.66 18 6.06 Yes 10 1.2 Yes 0 0 No -29 0.36 No 48 93.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108130483 + NM_000051 ATM 0 . . . 3.81 82.66 33 3.91 No 50 0.3 No 0 0 No -19 0.54 No 52 54.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7563645 - NM_000546 TP53 0 . . . 3.25 80.12 18 5.29 No 8 1.06 Yes 0 0 No -27 0.6 No 50 69.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215593790 - NM_000465 BARD1 0 . . . 7.24 81.89 16 5.23 No 22 0.73 No 0 0 No -27 0.28 No 36 93.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90987739 - NM_002485 NBN 0 . . . 3.17 66.04 20 7.14 Yes 38 1.55 Yes 0 0 No -19 0.73 Yes 47 57.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56795748 + NM_058216 RAD51C 0 . . . 0.11 0 31 4.95 No 22 1 Yes 0 0 No -57 0.65 No 36 89.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69121538 + NM_133509 RAD51B 0 . . . 5.32 79.8 24 6.61 Yes 73 0.22 No 0 0 No -23 0.94 Yes 44 60.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68604404 + NM_133509 RAD51B 0 . . . 0.33 72.1 36 5.72 Yes 29 0.16 No 0 0 No -25 0.49 No 47 30.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59762463 - NM_032043 BRIP1 0 . . . 0.19 68.66 20 4.79 No 22 -2.32 No 0 0 No -26 0.6 No 45 65.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69098070 + NM_133509 RAD51B 0 . . . 4.2 75.48 19 3.63 No 13 0.47 No 0 0 No -18 0.46 No 47 54.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7563712 - NM_000546 TP53 0 . . . 2.03 86.71 22 5.06 No 33 1.03 Yes 0 0 No -22 0.62 No 51 44.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69125989 + NM_133509 RAD51B 0 . . . 10.47 88.44 20 5.1 No 34 -1.02 No 0 0 No -19 0.49 No 46 54.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131943716 + NM_005732 RAD50 0 . . . 0.01 73.78 17 5.97 Yes 29 0.45 No 0 0 No -19 0.57 No 45 74.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23612722 - NM_024675 PALB2 0 . . . 0.52 0 37 6.21 Yes 17 0.85 Yes 0 0 No -29 0.64 No 41 75.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75488292 - NM_001040108 MLH3 0 . . . 3.28 66.95 27 5.74 Yes 67 0.9 Yes 0 0 No -26 0.56 No 35 71.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68675174 + NM_133509 RAD51B 0 . . . 7.4 87.11 37 6.08 Yes -1 1.03 Yes 0 0 No -36 0.53 No 48 37.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47785065 + NM_000251 MSH2 0 . . . 0.9 61.87 28 4.71 No 2 0.5 No 0 0 No -27 0.3 No 40 49.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131915087 + NM_005732 RAD50 0 . . . 3.75 72.93 27 5.2 No 23 0.86 Yes 0 0 No -26 0.69 Yes 46 87.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68410588 + NM_133509 RAD51B 0 . . . 2.89 74.44 21 6 Yes 2 0.26 No 0 0 No -20 0.8 Yes 48 25.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215659141 - NM_000465 BARD1 0 . . . 4.3 78.66 21 5.56 Yes 25 0.38 No 0 0 No -20 0.64 No 49 85.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68412830 + NM_133509 RAD51B 0 . . . 1.76 57.69 9 4.77 No 44 -5.01 No 0 0 No -28 0.79 Yes 42 55.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94221112 - NM_005591 MRE11 0 . . . 3.96 74.57 14 4.47 No 50 1.11 Yes 0 0 No -44 0.44 No 50 56.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108237242 + NM_000051 ATM 0 . . . 6.89 84.37 27 6.78 Yes 5 0.72 No 0 0 No -26 0.43 No 43 83.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68310891 + NM_133509 RAD51B 0 . . . 1.83 0 10 4 No 69 0.62 No 0 0 No -22 0.84 Yes 31 66.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68801960 + NM_004360 CDH1 0 . . . 2.79 65.88 30 5.48 No 16 1.1 Yes 0 0 No -29 0.69 Yes 42 89.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68858618 + NM_133509 RAD51B 0 . . . 2.48 67.47 19 6.52 Yes 24 0.39 No 0 0 No -23 0.92 Yes 39 60.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68747660 + NM_133509 RAD51B 0 . . . 6.81 82.67 25 5.78 Yes 29 -1.15 No 0 0 No -24 0.57 No 33 64.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89725899 + NM_000314 PTEN 0 . . . 6.97 82.76 13 5.83 Yes 20 0.79 Yes 0 0 No -27 0.85 Yes 38 89.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6039059 - NM_000535 PMS2 0 . . . 0.64 0 13 5.29 No 30 0.68 No 0 0 No -25 0.73 Yes 39 35.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68328787 + NM_133509 RAD51B 0 . . . 7.89 87.4 17 4.58 No 1 0.72 No 0 0 No -24 0.35 No 47 50.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68746032 + NM_133509 RAD51B 0 . . . 3.98 89.42 23 4.55 No 0 1.35 Yes 0 0 No -22 0.79 Yes 54 48.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69035420 + NM_133509 RAD51B 0 . . . 2.56 73.56 28 5.29 No 3 0.42 No 0 0 No -21 0.55 No 55 54.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68362225 + NM_133509 RAD51B 0 . . . 2.6 76.19 17 7.19 Yes 65 0.82 Yes 0 0 No -27 0.59 No 42 72.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68829446 + NM_133509 RAD51B 0 . . . 0.98 63.56 26 6.14 Yes 56 1.02 Yes 0 0 No -25 0.78 Yes 42 52.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59872196 - NM_032043 BRIP1 0 . . . 5.09 89.71 34 6.55 Yes 21 1.33 Yes 0 0 No -31 0.39 No 48 59.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215658594 - NM_000465 BARD1 0 . . . 3.41 72.71 18 3.92 No 31 0.51 No 0 0 No -20 0.49 No 46 85.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68839186 + NM_004360 CDH1 0 . . . 3.68 70.85 30 5.97 Yes 23 1.58 Yes 0 0 No -29 0.94 Yes 40 75.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69102143 + NM_133509 RAD51B 0 . . . 1.58 70.56 47 6.76 Yes 7 0.63 No 0 0 No -33 0.57 No 51 88.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68285876 + NM_133509 RAD51B 0 . . . 4.51 70.83 25 5.57 Yes 13 0.87 Yes 0 0 No -24 0.88 Yes 40 89.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7591705 - NM_000546 TP53 0 . . . 3.75 68.76 9 5.48 No 69 -1.11 No 0 0 No -23 0.48 No 45 35.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891461 + NM_133509 RAD51B 0 . . . 1.41 79.82 14 4.28 No 20 0.78 Yes 0 0 No -25 0.49 No 46 77.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48022096 + NM_000179 MSH6 0 . . . 0.98 68.06 20 5.02 No 47 0.76 No 0 0 No -19 0.29 No 48 81.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47796898 + NM_000251 MSH2 0 . . . 5.23 69.94 28 7.68 Yes -4 0.86 Yes 0 0 No -27 0.94 Yes 35 35.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68686418 + NM_133509 RAD51B 0 . . . 1.48 79.76 15 5.1 No 39 0.03 No 0 0 No -24 0.53 No 48 53.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6013079 - NM_000535 PMS2 0 . . . 2.55 73.41 15 4.73 No 62 -3.5 No 0 0 No -31 0.19 No 36 28.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69102111 + NM_133509 RAD51B 0 . . . 1.51 72.27 14 5.38 No 72 0.17 No 0 0 No -13 0.71 Yes 41 43.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152341939 - NM_005431 XRCC2 0 . . . 3.35 87.37 18 4.3 No 73 -5.95 No 0 0 No -28 0.71 Yes 44 68.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131937079 + NM_005732 RAD50 0 . . . 6.83 80.42 23 4.78 No 12 0.34 No 0 0 No -22 0.84 Yes 46 92.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37079949 + NM_000249 MLH1 0 . . . 2.61 83.96 29 6.29 Yes 62 0.56 No 0 0 No -24 0.72 Yes 45 71.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37035780 + NM_000249 MLH1 0 . . . 4.99 73.15 17 5.54 No 74 1.18 Yes 0 0 No -26 0.68 Yes 46 82.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37087594 + NM_000249 MLH1 0 . . . 1.83 66.76 35 3.44 No 41 0.1 No 0 0 No -32 0.62 No 48 75.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68500187 + NM_133509 RAD51B 0 . . . 1.38 75 29 4.71 No 14 -2.85 No 0 0 No -21 0.69 Yes 48 49.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68518823 + NM_133509 RAD51B 0 . . . 8.18 86.57 17 5.46 No 51 0.7 No 0 0 No -27 0.82 Yes 47 44.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190743678 + NM_000534 PMS1 0 . . . 1.82 73.73 16 5.11 No 25 1.38 Yes 0 0 No -23 0.57 No 49 87.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68609277 + NM_133509 RAD51B 0 . . . 4.68 74.62 22 6.85 Yes 11 0.22 No 0 0 No -21 0.93 Yes 41 53.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215650409 - NM_000465 BARD1 0 . . . 5.03 84.81 22 6.27 Yes 55 2.46 Yes 0 0 No -35 0.39 No 53 16.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68845745 + NM_133509 RAD51B 0 . . . 0.43 63.14 19 4.58 No 52 1.1 Yes 0 0 No -18 0.73 Yes 51 51.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37035945 + NM_000249 MLH1 0 . . . 4.18 68.34 23 5.03 No 47 0.26 No 0 0 No -54 0.74 Yes 52 67.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37065023 + NM_000249 MLH1 0 . . . 2.94 67.25 16 5.39 No 11 0.08 No 0 0 No -15 0.84 Yes 43 65.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32965777 + NM_000059 BRCA2 0 . . . 6.43 90.06 21 4.8 No 6 1.32 Yes 0 0 No -20 0.84 Yes 52 74.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68334412 + NM_133509 RAD51B 0 . . . 2.58 67.12 26 5.57 Yes 23 0.41 No 0 0 No -25 0.87 Yes 35 30.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89711378 + NM_000314 PTEN 0 . . . 1.74 67.73 22 4.8 No 52 -1.34 No 0 0 No -48 0.42 No 38 93.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32943533 + NM_000059 BRCA2 0 . . . 10.05 89.64 44 6.12 Yes 37 0.23 No 0 0 No -21 0.71 Yes 21 38.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29099811 - NM_001005735 CHEK2 0 . . . 6 89.25 22 5.1 No 50 0.16 No 0 0 No -19 0.51 No 55 41.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90951018 - NM_002485 NBN 0 . . . 6.12 73.92 24 5.29 No 23 1.17 Yes 0 0 No -23 0.81 Yes 30 59.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89655643 + NM_000314 PTEN 0 . . . 0.12 66.94 48 6.86 Yes 26 1.02 Yes 0 0 No -40 0.62 No 41 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215617209 - NM_000465 BARD1 0 . . . 3.03 79.47 21 5.66 Yes 64 -3.74 No 28 0.23 Yes -29 0.46 No 41 44.53 No BPP: Yes, SVM: No, Branch: Yes, LB: No, RNABPS: No chr14 68952948 + NM_133509 RAD51B 0 . . . 3.95 72.46 27 5.2 No 2 1.92 Yes 0 0 No -26 0.67 Yes 52 46.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59838217 - NM_032043 BRIP1 0 . . . 4.06 70.51 27 5.2 No 2 0.17 No 0 0 No -26 0.57 No 44 68.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32961704 + NM_000059 BRCA2 0 . . . 1.95 82.32 21 6.15 Yes 27 0.7 No 0 0 No -20 0.64 No 48 62.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68797370 + NM_133509 RAD51B 0 . . . 3.33 71.96 12 5.74 Yes 34 -3.05 No 0 0 No -44 0.47 No 40 65.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68705180 + NM_133509 RAD51B 0 . . . 1.8 70.8 17 5.34 No 39 1.73 Yes 0 0 No -22 0.88 Yes 48 71.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84395859 - NM_139076 FAM175A 0 . . . 3.01 0 26 5.58 Yes 26 1.14 Yes 0 0 No -30 0.79 Yes 44 89.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152345429 - NM_005431 XRCC2 0 . . . 3.61 76.97 31 5.74 Yes 41 0.99 Yes 0 0 No -26 0.64 No 44 61.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68459397 + NM_133509 RAD51B 0 . . . 2.04 71.42 37 6 Yes 22 -1.54 No 0 0 No -26 0.53 No 39 47.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215604870 - NM_000465 BARD1 0 . . . 1.04 67.45 36 7.92 Yes 44 0.53 No 0 0 No -23 0.74 Yes 32 75.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152370133 - NM_005431 XRCC2 0 . . . 5.93 83.07 35 4.15 No 49 -3.3 No 0 0 No -22 0.9 Yes 40 50.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69020724 + NM_133509 RAD51B 0 . . . 3.5 82.95 22 5.19 No 38 0.98 Yes 0 0 No -21 0.81 Yes 44 41.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41214053 - NM_007294 BRCA1 0 . . . 7.56 83.96 19 5.66 Yes -3 -1.52 No 0 0 No -48 0.63 No 43 70.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68953747 + NM_133509 RAD51B 0 . . . 2.44 77.34 17 4.58 No 1 1.16 Yes 0 0 No -16 0.77 Yes 57 53.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89653389 + NM_000314 PTEN 0 . . . 7.6 79.62 19 3.71 No -4 0.83 Yes 0 0 No -26 0.42 No 48 76.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108119339 + NM_000051 ATM 0 . . . 0.24 80.58 20 5.1 No 25 -3.77 No 0 0 No -24 0.42 No 46 60.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68670859 + NM_133509 RAD51B 0 . . . 5.29 77.56 26 5.16 No 70 1.16 Yes 0 0 No -25 0.63 No 51 35.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48025088 + NM_000179 MSH6 0 . . . 0.62 0 19 5 No 13 0.57 No 0 0 No -28 0.54 No 45 88.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68865623 + NM_004360 CDH1 0 . . . 6.66 85.02 33 5.77 Yes 70 0.14 No 0 0 No -32 0.76 Yes 43 71.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68515859 + NM_133509 RAD51B 0 . . . 10.31 90.41 24 5.31 No -4 0.73 No 0 0 No -24 0.45 No 47 44.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68620242 + NM_133509 RAD51B 0 . . . 2.87 71.76 16 4.4 No 75 0.99 Yes 0 0 No -18 0.63 No 47 54.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32959377 + NM_000059 BRCA2 0 . . . 0.09 64.28 26 6.16 Yes 19 0.71 No 0 0 No -25 0.74 Yes 39 68.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37076095 + NM_000249 MLH1 0 . . . 1.6 74.68 18 4.9 No 22 -3.04 No 0 0 No -21 0.31 No 38 63.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215673646 - NM_000465 BARD1 0 . . . 6.94 85.71 9 3.87 No 6 0.99 Yes 0 0 No -40 0.56 No 38 73.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59918192 - NM_032043 BRIP1 0 . . . 5.53 78.04 20 5.1 No 14 1.42 Yes 0 0 No -19 0.85 Yes 44 87.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7583934 - NM_000546 TP53 0 . . . 0.22 82.27 29 6.77 Yes 76 -5.14 No 0 0 No -24 0.83 Yes 45 50.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69103018 + NM_133509 RAD51B 0 . . . 1.32 70.79 19 4.69 No 46 -3.53 No 0 0 No -17 0.79 Yes 43 50.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56782796 + NM_058216 RAD51C 0 . . . 1.52 66.46 14 4.25 No 16 0.62 No 0 0 No -20 0.76 Yes 42 71.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40996604 + NM_001164269 RAD51 0 . . . 5.09 88.12 29 5.46 No 12 1.57 Yes 0 0 No -32 0.68 Yes 46 83.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69011594 + NM_133509 RAD51B 0 . . . 3.12 70.69 12 6.16 Yes 19 0.97 Yes 0 0 No -35 0.65 No 29 74.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69085352 + NM_133509 RAD51B 0 . . . 2.92 78.01 13 4.36 No 69 1.26 Yes 0 0 No -12 0.39 No 22 73.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68381795 + NM_133509 RAD51B 0 . . . 1.84 72.88 40 6.36 Yes 53 -4.39 No 0 0 No -21 0.46 No 51 34.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41224628 - NM_007294 BRCA1 0 . . . 2.98 72.85 20 5.1 No 58 -3.87 No 0 0 No -47 0.67 Yes 48 81.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47668123 + NM_000251 MSH2 0 . . . 4.28 85.02 17 4.79 No 54 -1.67 No 0 0 No -23 0.61 No 52 71.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90960360 - NM_002485 NBN 0 . . . 6.19 70.37 20 4.85 No 43 0.47 No 0 0 No -29 0.53 No 46 70.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215638544 - NM_000465 BARD1 0 . . . 0.12 66.34 27 5.13 No 42 -2.41 No 0 0 No -26 0.69 Yes 45 79.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68777453 + NM_004360 CDH1 0 . . . 3.43 80.12 19 5.66 Yes 7 1.05 Yes 0 0 No -27 0.73 Yes 51 83.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94224486 - NM_005591 MRE11 0 . . . 1.9 76.06 18 4.81 No 7 1.06 Yes 0 0 No -22 0.36 No 46 44.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69046905 + NM_133509 RAD51B 0 . . . 11.35 88.99 33 5.78 Yes 2 1.08 Yes 0 0 No -24 0.51 No 56 44.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68862050 + NM_133509 RAD51B 0 . . . 4.6 79.74 45 6.86 Yes 16 0.36 No 0 0 No -26 0.52 No 42 56.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47637415 + NM_000251 MSH2 0 . . . 0.82 65.18 25 4.9 No -1 0.27 No 0 0 No -28 0.46 No 62 31.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68458415 + NM_133509 RAD51B 0 . . . 5.1 70.32 12 5.2 No 45 -4.3 No 0 0 No -20 0.57 No 44 73.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94190584 - NM_005591 MRE11 0 . . . 7.43 80.42 33 6.08 Yes 61 0.34 No 0 0 No -32 0.39 No 41 26.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75514848 - NM_001040108 MLH3 0 . . . 1.03 64.71 23 5 No 9 -2.92 No 0 0 No -22 0.8 Yes 49 41.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41273010 - NM_007294 BRCA1 0 . . . 6.92 85.4 45 7.19 Yes 9 1.07 Yes 0 0 No -24 0.62 No 49 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84385483 - NM_139076 FAM175A 0 . . . 5.02 0 12 4.69 No 19 0.68 No 0 0 No -43 0.74 Yes 50 77.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68636219 + NM_133509 RAD51B 0 . . . 1.91 74.23 24 5.47 No 5 1.04 Yes 0 0 No -23 0.79 Yes 38 67.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215627522 - NM_000465 BARD1 0 . . . 3.85 64.18 12 5.35 No 47 0.63 No 0 0 No -24 0.36 No 39 83.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90946568 - NM_002485 NBN 0 . . . 7.52 90.46 15 4.58 No 51 0.02 No 0 0 No -14 0.43 No 45 47.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215623573 - NM_000465 BARD1 0 . . . 8.51 78.64 28 5.55 No 22 0.53 No 0 0 No -27 0.88 Yes 36 51.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68776367 + NM_004360 CDH1 0 . . . 2.24 80.12 14 5.1 No 7 1.16 Yes 0 0 No -19 0.49 No 51 87.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131915143 + NM_005732 RAD50 0 . . . 2.94 68.43 26 6.16 Yes 31 0.81 Yes 0 0 No -25 0.92 Yes 42 46.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68459723 + NM_133509 RAD51B 0 . . . 1.11 66.52 26 4.69 No 35 0.33 No 0 0 No -33 0.69 Yes 48 74.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131906285 + NM_005732 RAD50 0 . . . 10.09 91.59 61 6.77 Yes 73 1.04 Yes 0 0 No -19 0.72 Yes 48 85.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131944475 + NM_005732 RAD50 0 . . . 4.91 75.15 13 4.36 No 3 0.63 No 0 0 No -52 0.43 No 38 96.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105194528 + NM_021930 RINT1 0 . . . 5.2 85.02 28 4.75 No 5 1.23 Yes 0 0 No -27 0.54 No 53 69.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40992305 + NM_001164269 RAD51 0 . . . 1.35 71.23 12 4.24 No 35 0.33 No 0 0 No -20 0.59 No 38 80.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32972827 + NM_000059 BRCA2 0 . . . 0.75 71.57 52 7.78 Yes 38 -3.78 No 0 0 No -31 0.53 No 39 56.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68534896 + NM_133509 RAD51B 0 . . . 1.6 0 23 5.13 No 51 0.11 No 0 0 No -22 0.57 No 37 25.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190655370 + NM_000534 PMS1 0 . . . 6.76 76.48 20 4.69 No 66 1.06 Yes 0 0 No -19 0.84 Yes 45 96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68763698 + NM_133509 RAD51B 0 . . . 0.14 81.89 36 5.6 Yes 76 -3.81 No 0 0 No -29 0.73 Yes 53 35.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68656744 + NM_133509 RAD51B 0 . . . 0.36 70.54 16 4.69 No 27 0.2 No 0 0 No -25 0.27 No 44 55.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32969444 + NM_000059 BRCA2 0 . . . 4.55 66.39 25 5.38 No 2 0.21 No 0 0 No -43 0.79 Yes 49 79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89676683 + NM_000314 PTEN 0 . . . 6.34 78.67 32 5.74 Yes 72 -2.12 No 0 0 No -31 0.27 No 45 31.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23632603 - NM_024675 PALB2 0 . . . 0.64 67.38 15 4.36 No 65 0.91 Yes 0 0 No -53 0.38 No 48 71.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131948935 + NM_005732 RAD50 0 . . . 2.06 0 45 7.48 Yes 39 1.5 Yes 0 0 No -44 0.79 Yes 41 70.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68549961 + NM_133509 RAD51B 0 . . . 9.58 90.37 26 4.78 No 65 -4.5 No 0 0 No -25 0.52 No 49 45.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89699344 + NM_000314 PTEN 0 . . . 2.41 68.34 24 5.9 Yes 23 0.84 Yes 0 0 No -29 0.73 Yes 45 72.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7563648 - NM_000546 TP53 0 . . . 5.2 85.02 13 4.36 No 5 1.09 Yes 0 0 No -47 0.65 No 44 61.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108136980 + NM_000051 ATM 0 . . . 1.05 61.38 11 4.89 No 49 -4.57 No 0 0 No -42 0.71 Yes 47 49.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68285686 + NM_133509 RAD51B 0 . . . 3.81 81.02 40 6.3 Yes 38 0.71 No 0 0 No -24 0.65 No 51 82.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68785587 + NM_004360 CDH1 0 . . . 3.6 85.02 15 5.48 No 4 1.2 Yes 0 0 No -14 0.35 No 54 74.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94185310 - NM_005591 MRE11 0 . . . 0.19 74.02 22 5.95 Yes 28 1.45 Yes 0 0 No -30 0.52 No 49 57.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68960626 + NM_133509 RAD51B 0 . . . 5 86.58 36 5.82 Yes 53 0.27 No 0 0 No -25 0.55 No 51 52.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6039978 - NM_000535 PMS2 0 . . . 7.84 79.96 46 6.27 Yes 50 0.48 No 0 0 No -30 0.54 No 16 45.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680969 + NM_000251 MSH2 0 . . . 6.29 73.93 24 5.48 No 73 0.8 Yes 0 0 No -23 0.6 No 35 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69019113 + NM_133509 RAD51B 0 . . . 2.92 83.9 19 4.21 No 11 1.09 Yes 0 0 No -36 0.81 Yes 47 58.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47744686 + NM_000251 MSH2 0 . . . 0.13 66.61 17 5.74 Yes 9 0.86 Yes 0 0 No -26 0.78 Yes 49 71.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32896564 + NM_000059 BRCA2 0 . . . 4.53 83.33 25 4.52 No 7 0.22 No 0 0 No -24 0.93 Yes 51 75.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89631258 + NM_000314 PTEN 0 . . . 5.02 63.04 26 5.1 No 57 0.7 No 0 0 No -42 0.45 No 36 70.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68807429 + NM_133509 RAD51B 0 . . . 5.97 82.41 19 4.58 No 4 1.67 Yes 0 0 No -16 0.49 No 28 81.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190714499 + NM_000534 PMS1 0 . . . 0.37 0 19 4.33 No 37 1.09 Yes 0 0 No -18 0.52 No 48 65.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29090750 - NM_001005735 CHEK2 0 . . . 5.03 77.18 44 5.82 Yes -3 1.3 Yes 0 0 No -33 0.77 Yes 40 50.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89658040 + NM_000314 PTEN 0 . . . 3.06 76.09 9 3.87 No 49 1.38 Yes 0 0 No -32 0.93 Yes 43 63.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94179830 - NM_005591 MRE11 0 . . . 3.12 69.48 32 5.64 Yes 34 0.33 No 0 0 No -31 0.53 No 44 94.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84401091 - NM_139076 FAM175A 0 . . . 7.21 89.4 33 6.24 Yes 40 0.94 Yes 0 0 No -32 0.75 Yes 22 79.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89682758 + NM_000314 PTEN 0 . . . 3.36 69.82 23 5.73 Yes 48 0.57 No 0 0 No -22 0.55 No 41 38.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59921103 - NM_032043 BRIP1 0 . . . 1.36 0 43 6.68 Yes 75 0.48 No 0 0 No -22 0.51 No 48 46.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59922481 - NM_032043 BRIP1 0 . . . 1.45 0 34 5.79 Yes 47 -4.57 No 0 0 No -33 0.64 No 51 40.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68433741 + NM_133509 RAD51B 0 . . . 3.23 75.03 22 4.9 No 68 0.87 Yes 0 0 No -19 0.57 No 57 25.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89646933 + NM_000314 PTEN 0 . . . 1.15 68.31 24 5.31 No 50 -4.79 No 0 0 No -23 0.66 No 47 77.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59899368 - NM_032043 BRIP1 0 . . . 4.74 67.87 28 5.68 Yes 8 1.35 Yes 0 0 No -27 0.54 No 50 65.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47804396 + NM_000251 MSH2 0 . . . 2.59 83.63 16 5.55 No 71 0.51 No 0 0 No -29 0.57 No 50 89.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131913036 + NM_005732 RAD50 0 . . . 5.03 75.14 32 5.17 No 71 2.23 Yes 0 0 No -31 0.93 Yes 44 57.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56772017 + NM_058216 RAD51C 0 . . . 3.6 85.02 24 3.69 No 4 1.2 Yes 0 0 No -29 0.72 Yes 54 46.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94199124 - NM_005591 MRE11 0 . . . 6.18 76.71 21 5.83 Yes 54 1.34 Yes 0 0 No -20 0.58 No 43 91.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68730593 + NM_133509 RAD51B 0 . . . 0.25 64.65 25 5.48 No 57 -5.52 No 0 0 No -24 0.51 No 52 30 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59894773 - NM_032043 BRIP1 0 . . . 8.98 81.11 15 4.46 No 24 0.04 No 0 0 No -32 0.76 Yes 49 78.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47769356 + NM_000251 MSH2 0 . . . 5.69 82.39 18 3.88 No 24 0.61 No 0 0 No -23 0.84 Yes 34 91.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40991194 + NM_001164269 RAD51 0 . . . 0.04 65.31 20 4.9 No 50 -4.41 No 0 0 No -20 0.4 No 41 46.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68532921 + NM_133509 RAD51B 0 . . . 1.38 68.76 27 4.64 No 40 0.37 No 0 0 No -26 0.37 No 26 57.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108205988 + NM_000051 ATM 0 . . . 5.5 78.86 25 5.39 No 45 -3.84 No 0 0 No -22 0.67 Yes 47 66.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7587808 - NM_000546 TP53 0 . . . 6.57 71.66 18 5.33 No 76 0.56 No 0 0 No -25 0.36 No 45 65.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68722657 + NM_133509 RAD51B 0 . . . 5.22 84.94 31 4.73 No 4 0.53 No 0 0 No -28 0.55 No 48 79.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68884908 + NM_133509 RAD51B 0 . . . 3.14 68.79 17 5.29 No 11 1.54 Yes 0 0 No -16 0.52 No 47 59.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89662840 + NM_000314 PTEN 0 . . . 6.35 87.2 24 4.26 No 27 1.65 Yes 0 0 No -24 0.67 Yes 36 69.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56803465 + NM_058216 RAD51C 0 . . . 4.31 68.29 25 5.07 No 11 0.62 No 0 0 No -25 0.48 No 46 66.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52434569 - NM_004656 BAP1 0 . . . 0.58 0 13 5.5 No 11 0.32 No 0 0 No -32 0.56 No 57 29.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108100744 + NM_000051 ATM 0 . . . 3.22 75.35 16 4.69 No 69 1.15 Yes 0 0 No -19 0.46 No 46 58.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68868383 + NM_004360 CDH1 0 . . . 3.2 69.79 21 4.58 No 18 0.62 No 0 0 No -20 0.7 Yes 40 84.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68602928 + NM_133509 RAD51B 0 . . . 4.25 73.93 21 5.17 No 9 0.4 No 0 0 No -26 0.4 No 49 72.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75485153 - NM_001040108 MLH3 0 . . . 2.17 78.72 23 4.9 No -3 0.94 Yes 0 0 No -22 0.96 Yes 51 54.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47766135 + NM_000251 MSH2 0 . . . 7.31 91.13 18 5.92 Yes 11 1.49 Yes 0 0 No -30 0.52 No 47 65.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41272335 - NM_007294 BRCA1 0 . . . 2.96 73.28 22 5.29 No 14 0.23 No 0 0 No -42 0.6 No 49 58.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84380357 - NM_139076 FAM175A 0 . . . 0.29 0 12 4.72 No 13 1.02 Yes 0 0 No -22 0.56 No 45 73.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68734272 + NM_133509 RAD51B 0 . . . 0.78 60.13 33 5.86 Yes 2 0.22 No 0 0 No -32 0.71 Yes 56 47.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68645002 + NM_133509 RAD51B 0 . . . 4.53 80.52 27 4.74 No 18 0.82 Yes 0 0 No -26 0.88 Yes 45 51.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47646104 + NM_000251 MSH2 0 . . . 2.04 72.29 24 4.79 No 52 0.82 Yes 0 0 No -45 0.63 No 52 35.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108101529 + NM_000051 ATM 0 . . . 1.68 0 34 7.62 Yes 15 1.1 Yes 0 0 No -33 0.79 Yes 43 89.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47679436 + NM_000251 MSH2 0 . . . 1.24 64.41 15 3.99 No 1 0.46 No 0 0 No -23 0.53 No 43 48.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47646794 + NM_000251 MSH2 0 . . . 1.69 71.1 23 4.9 No 76 1.14 Yes 0 0 No -22 0.39 No 10 26.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215673333 - NM_000465 BARD1 0 . . . 5.75 76.72 10 4 No 9 0.87 Yes 0 0 No -26 0.87 Yes 49 78.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90945826 - NM_002485 NBN 0 . . . 4.11 69.53 24 5.1 No 53 0.29 No 0 0 No -23 0.69 Yes 43 65.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90961708 - NM_002485 NBN 0 . . . 8.22 85.65 15 5.29 No 70 1.36 Yes 0 0 No -27 0.53 No 37 55.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68330117 + NM_133509 RAD51B 0 . . . 2.81 79.05 24 4.99 No 72 -6.27 No 0 0 No -31 0.4 No 49 91.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47746212 + NM_000251 MSH2 0 . . . 3.58 77.85 15 4.35 No 6 0.08 No 0 0 No -14 0.68 Yes 52 91.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108186315 + NM_000051 ATM 0 . . . 1.41 54.93 17 4.69 No 21 0.28 No 0 0 No -16 0.63 No 21 82.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56778009 + NM_058216 RAD51C 0 . . . 2.1 72.33 38 6.63 Yes 28 1.73 Yes 0 0 No -37 0.83 Yes 46 42.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68914330 + NM_133509 RAD51B 0 . . . 1.33 69.43 16 4.69 No 67 -5.39 No 0 0 No -33 0.56 No 44 27.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47632769 + NM_000251 MSH2 0 . . . 5.74 82.19 20 4.77 No 57 0.5 No 0 0 No -19 0.88 Yes 40 59.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68948337 + NM_133509 RAD51B 0 . . . 4.07 0 18 5.09 No 39 0.64 No 0 0 No -23 0.64 No 30 64.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94197118 - NM_005591 MRE11 0 . . . 4.3 64.44 20 4.53 No 12 0.9 Yes 0 0 No -23 0.63 No 34 69.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68824822 + NM_133509 RAD51B 0 . . . 7.13 89.51 18 5.47 No 5 0.28 No 0 0 No -17 0.51 No 49 87.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68533931 + NM_133509 RAD51B 0 . . . 0.32 74.68 22 5.73 Yes 29 0.5 No 0 0 No -21 0.61 No 54 69.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47766138 + NM_000251 MSH2 0 . . . 7.71 87.71 9 3.79 No 14 1.48 Yes 0 0 No -31 0.7 Yes 44 68.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47744373 + NM_000251 MSH2 0 . . . 6.49 75.15 20 5.1 No 10 1.65 Yes 0 0 No -44 0.36 No 48 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69039962 + NM_133509 RAD51B 0 . . . 6.17 80.86 32 5.87 Yes 27 1.68 Yes 0 0 No -31 0.74 Yes 57 21.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59901630 - NM_032043 BRIP1 0 . . . 3.87 73.45 28 5.12 No 70 -2.59 No 0 0 No -23 0.54 No 44 75.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40994429 + NM_001164269 RAD51 0 . . . 2.55 78.49 18 5.92 Yes 7 1.7 Yes 0 0 No -17 0.46 No 51 94.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131956886 + NM_005732 RAD50 0 . . . 0.03 61.45 32 5.95 Yes 67 -5.26 No 0 0 No -31 0.75 Yes 47 74.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68749745 + NM_133509 RAD51B 0 . . . 4.22 79.81 15 4.34 No 32 -1.7 No 0 0 No -32 0.69 Yes 45 55.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68650781 + NM_133509 RAD51B 0 . . . 0.92 76.63 29 5.92 Yes 58 -4.43 No 0 0 No -28 0.48 No 43 59.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1219565 + NM_000455 STK11 0 . . . 5.67 83.78 17 5.29 No 51 1.17 Yes 0 0 No -21 0.58 No 29 80.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59772379 - NM_032043 BRIP1 0 . . . 5.16 77.87 30 5.36 No 75 0.19 No 0 0 No -23 0.54 No 47 41.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108197505 + NM_000051 ATM 0 . . . 5.68 77.86 21 4.99 No 67 -3.45 No 0 0 No -20 0.83 Yes 55 65.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40988257 + NM_001164269 RAD51 0 . . . 4.03 85.02 19 5.39 No 4 1.17 Yes 0 0 No -24 0.94 Yes 54 61.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68332055 + NM_133509 RAD51B 0 . . . 2.94 72.54 18 3.79 No 16 0.84 Yes 0 0 No -27 0.6 No 42 96.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94189790 - NM_005591 MRE11 0 . . . 4.08 75.25 25 5.1 No -2 0.08 No 0 0 No -55 0.35 No 49 42.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47762171 + NM_000251 MSH2 0 . . . 1.03 63.54 23 5.09 No 69 0.2 No 0 0 No -22 0.7 Yes 47 34.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68821461 + NM_133509 RAD51B 0 . . . 5.18 77.75 22 6.32 Yes 11 0.56 No 0 0 No -24 0.82 Yes 39 93.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215632524 - NM_000465 BARD1 0 . . . 2.74 85.16 23 7.41 Yes 4 1.32 Yes 0 0 No -22 0.76 Yes 48 88.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131977585 + NM_005732 RAD50 0 . . . 2.96 72.83 29 5.17 No 9 0.41 No 0 0 No -29 0.39 No 45 89.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68893779 + NM_133509 RAD51B 0 . . . 3.36 66.39 25 5.26 No 39 1.07 Yes 0 0 No -29 0.6 No 48 58.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59837123 - NM_032043 BRIP1 0 . . . 2.24 72.44 17 4.91 No 42 1.33 Yes 0 0 No -29 0.73 Yes 16 48.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68978841 + NM_133509 RAD51B 0 . . . 6.79 0 14 5.1 No 47 1.29 Yes 0 0 No -30 0.41 No 56 43.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68680513 + NM_133509 RAD51B 0 . . . 1.93 72.71 47 5 No 46 -3.43 No 0 0 No -21 0.45 No 46 38.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68458643 + NM_133509 RAD51B 0 . . . 6.42 81.08 18 5.92 Yes 67 -6.3 No 0 0 No -17 0.4 No 42 59.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68329074 + NM_133509 RAD51B 0 . . . 1.95 69.14 162 10.06 Yes 74 -6.27 No 0 0 No -25 0.85 Yes 56 41.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41279068 - NM_007294 BRCA1 0 . . . 8.08 90.14 37 6 Yes 5 1.14 Yes 0 0 No -29 0.55 No 53 85.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6049527 - NM_000535 PMS2 0 . . . 2.4 74.11 48 6.82 Yes 30 -0.72 No 0 0 No -32 0.62 No 49 36.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666295 - NM_000465 BARD1 0 . . . 0.33 72.56 29 5.82 Yes 76 -5.78 No 0 0 No -28 0.82 Yes 47 40.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68899176 + NM_133509 RAD51B 0 . . . 5.14 71.99 46 7.14 Yes 61 1.04 Yes 0 0 No -22 0.85 Yes 29 40.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29092224 - NM_001005735 CHEK2 0 . . . 1.51 70.75 13 5.48 No 49 0.46 No 0 0 No -27 0.36 No 47 70.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68828700 + NM_133509 RAD51B 0 . . . 2.58 71.35 45 7.14 Yes 67 1.59 Yes 0 0 No -44 0.71 Yes 46 44.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75494709 - NM_001040108 MLH3 0 . . . 5.41 78.72 24 5.82 Yes 33 0.15 No 0 0 No -23 0.74 Yes 27 55.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59941883 - NM_032043 BRIP1 0 . . . 3.8 0 34 9.43 Yes 45 1.11 Yes 0 0 No -32 0.39 No 44 79.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68786489 + NM_004360 CDH1 0 . . . 0.27 76.84 18 4.69 No 64 -3.49 No 0 0 No -38 0.54 No 51 36.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89670278 + NM_000314 PTEN 0 . . . 12.09 87 18 3.94 No 12 0.89 Yes 0 0 No -25 0.83 Yes 46 92.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47666801 + NM_000251 MSH2 0 . . . 4.42 71.98 18 5.74 Yes 68 1.17 Yes 0 0 No -26 0.73 Yes 26 75.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90964132 - NM_002485 NBN 0 . . . 6.68 74.76 30 4 No 16 0.17 No 0 0 No -32 0.75 Yes 42 73.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68513002 + NM_133509 RAD51B 0 . . . 3.55 76.73 27 4.5 No 38 1.33 Yes 0 0 No -26 0.89 Yes 49 90.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69064448 + NM_133509 RAD51B 0 . . . 2.4 76.88 30 6.11 Yes 6 0.44 No 0 0 No -29 0.83 Yes 41 72.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68786036 + NM_004360 CDH1 0 . . . 3.3 83.88 12 5 No 4 1.19 Yes 0 0 No -20 0.76 Yes 54 60.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68811588 + NM_004360 CDH1 0 . . . 1.94 76.53 13 4.24 No 31 0.78 Yes 0 0 No -26 0.66 No 27 59.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56773674 + NM_058216 RAD51C 0 . . . 0.65 64.28 37 6.56 Yes 57 1.21 Yes 0 0 No -36 0.14 No 42 64.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68792680 + NM_133509 RAD51B 0 . . . 0.64 83.55 21 4.93 No 67 0.56 No 0 0 No -20 0.65 No 48 64.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215593837 - NM_000465 BARD1 0 . . . 10.01 81 20 5.48 No 14 0.69 No 0 0 No -19 0.84 Yes 35 57.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68789412 + NM_004360 CDH1 0 . . . 3.42 70.85 27 4.4 No 23 0.63 No 0 0 No -22 0.31 No 40 82.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68385133 + NM_133509 RAD51B 0 . . . 3.6 85.02 36 5.92 Yes 4 1.2 Yes 0 0 No -20 0.31 No 43 79.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69138827 + NM_133509 RAD51B 0 . . . 0.59 67.43 23 7.35 Yes 55 0.65 No 0 0 No -22 0.85 Yes 54 31.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108241408 + NM_000051 ATM 0 . . . 10.03 85.87 20 5.45 No 37 0.94 Yes 0 0 No -23 0.67 Yes 47 67.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68803203 + NM_004360 CDH1 0 . . . 2.41 79.3 20 5.1 No 73 0.77 No 0 0 No -19 0.63 No 51 52.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89665416 + NM_000314 PTEN 0 . . . 2.78 80.12 23 6.08 Yes 7 1.16 Yes 0 0 No -22 0.93 Yes 51 66.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68773637 + NM_133509 RAD51B 0 . . . 6.19 88.45 19 5.83 Yes 2 0.62 No 0 0 No -27 0.83 Yes 51 35.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59881691 - NM_032043 BRIP1 0 . . . 0.07 0 46 6.41 Yes 34 0.66 No 0 0 No -25 0.84 Yes 33 65.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59798340 - NM_032043 BRIP1 0 . . . 1.15 64.34 24 4.51 No 59 1.06 Yes 0 0 No -23 0.53 No 42 49.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47769340 + NM_000251 MSH2 0 . . . 0.22 77.65 28 5.75 Yes 8 0.6 No 0 0 No -27 0.75 Yes 50 94.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75498957 - NM_001040108 MLH3 0 . . . 0.38 75.1 34 8.09 Yes 23 0.67 No 0 0 No -42 0.36 No 28 61.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7582897 - NM_000546 TP53 0 . . . 0.09 74.68 31 6 Yes 59 0.92 Yes 0 0 No -30 0.89 Yes 54 87.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59760920 - NM_032043 BRIP1 0 . . . 0.7 68.53 51 7.07 Yes -3 0.62 No 0 0 No -38 0.38 No 61 59.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108240772 + NM_000051 ATM 0 . . . 3.59 88.99 19 5.57 Yes 51 1.61 Yes 0 0 No -24 0.76 Yes 48 63.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32897606 + NM_000059 BRCA2 0 . . . 5.3 81.23 22 5.83 Yes 74 1.68 Yes 0 0 No -21 0.55 No 43 86.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68869566 + NM_004360 CDH1 0 . . . 0.6 74.68 42 7.68 Yes 4 0.1 No 0 0 No -41 0.63 No 54 82.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131940059 + NM_005732 RAD50 0 . . . 2.32 65.88 27 7.16 Yes 16 1.09 Yes 0 0 No -26 0.91 Yes 42 87.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37047704 + NM_000249 MLH1 0 . . . 5.2 85.02 15 5.05 No 5 1.09 Yes 0 0 No -24 0.71 Yes 53 82.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32888607 + NM_000059 BRCA2 0 . . . 1.52 0 20 6.17 Yes 44 0.43 No 0 0 No -28 0.83 Yes 41 53.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68620060 + NM_133509 RAD51B 0 . . . 5.7 88.14 28 5.56 Yes 58 0.17 No 0 0 No -27 0.85 Yes 48 65.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108238881 + NM_000051 ATM 0 . . . 7.01 76.69 18 4.9 No 36 -3.04 No 0 0 No -26 0.41 No 45 54.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69074015 + NM_133509 RAD51B 0 . . . 4.39 88.1 35 5.8 Yes 39 1.02 Yes 0 0 No -21 0.61 No 19 79.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37072079 + NM_000249 MLH1 0 . . . 6.93 84.23 62 7.72 Yes 30 -1.07 No 0 0 No -28 0.45 No 53 17.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68624774 + NM_133509 RAD51B 0 . . . 2.34 56.27 21 5.74 Yes 13 1.23 Yes 0 0 No -20 0.87 Yes 45 61.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68318724 + NM_133509 RAD51B 0 . . . 2.34 0 20 5.24 No 32 0.25 No 0 0 No -19 0.72 Yes 47 57.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45794762 - NM_001048171 MUTYH 0 . . . 7.09 74.5 25 5.28 No 57 0.72 No 0 0 No -24 0.83 Yes 49 44.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69122704 + NM_133509 RAD51B 0 . . . 4.54 73.54 21 4.46 No 57 1.21 Yes 0 0 No -20 0.53 No 47 70.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68846612 + NM_004360 CDH1 0 . . . 1.33 72.59 20 6.21 Yes 62 0.94 Yes 0 0 No -19 0.55 No 29 56.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190697534 + NM_000534 PMS1 0 . . . 5.35 72.36 29 7.35 Yes 76 0.94 Yes 0 0 No -28 0.92 Yes 42 78.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68348876 + NM_133509 RAD51B 0 . . . 2.51 0 120 11.09 Yes 63 1.74 Yes 0 0 No -21 0.38 No 49 86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108138270 + NM_000051 ATM 0 . . . 2.15 77.78 20 4.44 No 54 0.42 No 0 0 No -48 0.6 No 40 87.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68806405 + NM_133509 RAD51B 0 . . . 5.4 82.27 33 5.99 Yes 74 1.12 Yes 0 0 No -22 0.65 No 46 37.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90987034 - NM_002485 NBN 0 . . . 7.89 83.76 25 5.27 No 4 1.71 Yes 0 0 No -21 0.63 No 45 65.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68452043 + NM_133509 RAD51B 0 . . . 3.78 74.63 24 4.83 No 42 -2.13 No 0 0 No -28 0.65 No 53 55.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190691447 + NM_000534 PMS1 0 . . . 5.39 88.38 25 5.57 Yes 40 1.11 Yes 0 0 No -26 0.69 Yes 28 73.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131958120 + NM_005732 RAD50 0 . . . 2.32 65.17 19 7.07 Yes 24 0.49 No 0 0 No -18 0.71 Yes 34 58.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68818770 + NM_004360 CDH1 0 . . . 7.55 79.88 16 8.16 Yes 65 1.9 Yes 0 0 No -19 0.44 No 46 81.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40998319 + NM_001164269 RAD51 0 . . . 3.81 82.09 26 4.99 No 28 1.52 Yes 0 0 No -25 0.56 No 30 92.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68570547 + NM_133509 RAD51B 0 . . . 0.83 70.16 20 5.1 No 0 0.38 No 0 0 No -19 0.84 Yes 50 32.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68312677 + NM_133509 RAD51B 0 . . . 5.17 77.41 25 5.65 Yes 61 1.12 Yes 0 0 No -24 0.56 No 34 98.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59890878 - NM_032043 BRIP1 0 . . . 2.61 66.78 17 6.87 Yes 66 1.08 Yes 0 0 No -30 0.77 Yes 34 55.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47640994 + NM_000251 MSH2 0 . . . 4.43 73.57 25 3.75 No 4 1.47 Yes 0 0 No -24 0.42 No 36 84.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59878188 - NM_032043 BRIP1 0 . . . 1.64 72.13 18 5.29 No 43 0.62 No 0 0 No -25 0.41 No 15 62.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29090919 - NM_001005735 CHEK2 0 . . . 2.28 69.59 23 5.25 No 13 0.17 No 0 0 No -22 0.42 No 45 91.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89701249 + NM_000314 PTEN 0 . . . 3.59 76.07 30 4.73 No 5 0.81 Yes 0 0 No -33 0.26 No 49 38.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48029046 + NM_000179 MSH6 0 . . . 1.09 0 17 4.43 No 8 0.76 No 0 0 No -21 0.36 No 45 55.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89621924 + NM_000314 PTEN 0 . . . 5.92 73.28 17 6.07 Yes 65 1.44 Yes 0 0 No -16 0.67 Yes 45 58.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68544841 + NM_133509 RAD51B 0 . . . 3.41 69.21 16 5.83 Yes 56 -4.71 No 0 0 No -29 0.43 No 49 35.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68401757 + NM_133509 RAD51B 0 . . . 3.89 88.24 20 5.1 No 7 0.69 No 0 0 No -22 0.76 Yes 51 76.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29138501 - NM_001005735 CHEK2 0 . . . 6.28 84.21 30 5.26 No 55 1.89 Yes 0 0 No -26 0.33 No 46 80.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68349418 + NM_133509 RAD51B 0 . . . 3.87 69 32 5.87 Yes 32 0.6 No 0 0 No -31 0.83 Yes 38 59.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190700850 + NM_000534 PMS1 0 . . . 5.66 82.39 29 7.35 Yes 10 0.08 No 0 0 No -28 0.93 Yes 47 79.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131979709 + NM_005732 RAD50 0 . . . 0.01 63.35 15 5.1 No 20 0.72 No 0 0 No -22 0.39 No 37 70.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59857853 - NM_032043 BRIP1 0 . . . 3.21 87.39 11 4.69 No 76 1.21 Yes 0 0 No -20 0.59 No 50 87.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75482976 - NM_001040108 MLH3 0 . . . 1.56 65.23 15 5.2 No 71 0.35 No 0 0 No -53 0.95 Yes 44 42.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33439431 - NM_002878 RAD51D 0 . . . 1.12 66.07 25 4.46 No 70 -4.55 No 0 0 No -29 0.32 No 27 53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68828413 + NM_133509 RAD51B 0 . . . 2.28 83.14 37 6.48 Yes 38 1.76 Yes 0 0 No -28 0.65 No 40 79.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59933110 - NM_032043 BRIP1 0 . . . 2.57 68.3 20 4.68 No 34 -2.01 No 0 0 No -18 0.71 Yes 15 49.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68883007 + NM_133509 RAD51B 0 . . . 0.8 71.41 34 8.27 Yes 35 0.97 Yes 0 0 No -33 0.86 Yes 23 87.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7580512 - NM_000546 TP53 0 . . . 4.5 81.58 22 4.9 No 57 0.74 No 0 0 No -21 0.77 Yes 46 97.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68637690 + NM_133509 RAD51B 0 . . . 2.92 68.8 22 5.29 No 22 0.34 No 0 0 No -43 0.72 Yes 36 57.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84406097 - NM_139076 FAM175A 0 . . . 0.22 63.03 20 4.47 No 48 -3.57 No 0 0 No -32 0.69 Yes 41 35.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47661879 + NM_000251 MSH2 0 . . . 2.49 68.73 32 5.74 Yes 51 0.89 Yes 0 0 No -31 0.86 Yes 34 84.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68311192 + NM_133509 RAD51B 0 . . . 4.68 83.39 32 6.1 Yes 5 1.25 Yes 0 0 No -22 0.37 No 53 71.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89715055 + NM_000314 PTEN 0 . . . 1.01 71.15 25 5.32 No 75 0.58 No 0 0 No -22 0.84 Yes 45 58.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68866905 + NM_004360 CDH1 0 . . . 2.27 69.72 22 5.78 Yes NA NA NA 0 0 No -27 0.87 Yes 48 50.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108123446 + NM_000051 ATM 0 . . . 0.95 65.54 37 6.56 Yes 58 0.29 No 0 0 No -36 0.83 Yes 50 87.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59797941 - NM_032043 BRIP1 0 . . . 3 75.89 34 6 Yes 46 0.27 No 0 0 No -27 0.41 No 46 89.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108157503 + NM_000051 ATM 0 . . . 7.62 78.26 15 3.72 No 39 1.26 Yes 0 0 No -22 0.67 Yes 46 87.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1224922 + NM_000455 STK11 0 . . . 9.28 84.04 25 6.27 Yes -4 1.55 Yes 0 0 No -24 0.75 Yes 43 66.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68345641 + NM_133509 RAD51B 0 . . . 1.12 75.18 32 5.21 No 35 1.02 Yes 0 0 No -34 0.54 No 23 56.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108150000 + NM_000051 ATM 0 . . . 2.52 0 15 5 No 7 0.14 No 0 0 No -53 0.5 No 45 55.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89715168 + NM_000314 PTEN 0 . . . 5.27 74.57 19 5 No 35 1.14 Yes 0 0 No -22 0.46 No 45 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41235769 - NM_007294 BRCA1 0 . . . 0.7 68.69 33 5.49 No 54 0.62 No 0 0 No -40 0.43 No 33 89.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94180749 - NM_005591 MRE11 0 . . . 2.89 68.34 32 7.9 Yes 13 0.86 Yes 0 0 No -31 0.72 Yes 45 55.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68919403 + NM_133509 RAD51B 0 . . . 1.32 77.21 17 5.95 Yes 49 1.85 Yes 0 0 No -22 0.45 No 42 94.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68380313 + NM_133509 RAD51B 0 . . . 2.21 70.6 47 8.13 Yes 18 0.49 No 0 0 No -25 0.78 Yes 40 83.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215593040 - NM_000465 BARD1 0 . . . 4.38 72.39 11 5.47 No 11 0.54 No 0 0 No -23 0.54 No 47 52.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89629443 + NM_000314 PTEN 0 . . . 3.32 64.19 20 6.61 Yes 41 -2.33 No 0 0 No -29 0.67 Yes 50 89.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68808002 + NM_004360 CDH1 0 . . . 5.58 79.84 37 6.4 Yes 6 0.62 No 0 0 No -36 0.64 No 52 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33427948 - NM_002878 RAD51D 0 . . . 3.92 77.35 15 5.2 No 13 0.56 No 0 0 No -38 0.53 No 45 60.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47699221 + NM_000251 MSH2 0 . . . 0.34 0 13 4.98 No 50 -3.01 No 0 0 No -25 0.43 No 49 43.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59925011 - NM_032043 BRIP1 0 . . . 7.8 83.53 28 3.89 No 6 0.71 No 0 0 No -25 0.31 No 44 85.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23617084 - NM_024675 PALB2 0 . . . 0.36 0 25 6.09 Yes 37 0.18 No 0 0 No -24 0.82 Yes 38 74.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59942155 - NM_032043 BRIP1 0 . . . 0.05 0 25 4.9 No 38 0.75 No 0 0 No -24 0.36 No 48 51.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47703822 + NM_000251 MSH2 0 . . . 3.19 70.51 19 5.33 No 4 0.2 No 0 0 No -27 0.46 No 49 53.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89707958 + NM_000314 PTEN 0 . . . 6.87 78.71 15 5.31 No 53 0.72 No 0 0 No -25 0.67 Yes 45 69.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1228312 + NM_000455 STK11 0 . . . 5.52 87 11 4.58 No 76 1.86 Yes 0 0 No -33 0.42 No 52 42.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68726690 + NM_133509 RAD51B 0 . . . 0.58 0 27 4.26 No 6 0.26 No 0 0 No -22 0.68 Yes 52 91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94148493 - NM_005591 MRE11 0 . . . 2.54 65.5 61 5.66 Yes 51 0.3 No 0 0 No -43 0.56 No 36 68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56804669 + NM_058216 RAD51C 0 . . . 1.58 80.12 32 5.65 Yes 6 1.32 Yes 0 0 No -31 0.86 Yes 52 63.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37074514 + NM_000249 MLH1 0 . . . 3.14 66.18 37 7.12 Yes 76 -1.67 No 0 0 No -28 0.8 Yes 44 45.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48007807 + NM_000179 MSH6 0 . . . 2.37 79.94 32 6.55 Yes 67 -4.8 No 0 0 No -31 0.73 Yes 43 33.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47777703 + NM_000251 MSH2 0 . . . 3.48 84.24 20 7.14 Yes 4 1.19 Yes 0 0 No -19 0.79 Yes 40 52.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23618537 - NM_024675 PALB2 0 . . . 2.31 59.97 22 4.8 No 43 0.7 No 0 0 No -21 0.71 Yes 29 74.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215646890 - NM_000465 BARD1 0 . . . 1.55 61.51 20 3.52 No 35 0.39 No 0 0 No -19 0.58 No 16 32.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56789885 + NM_058216 RAD51C 0 . . . 6.87 72.13 20 5.4 No 31 0.2 No 0 0 No -20 0.82 Yes 45 87.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68475186 + NM_133509 RAD51B 0 . . . 3.3 74.3 28 5.11 No 62 0.54 No 0 0 No -27 0.95 Yes 43 30.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89695890 + NM_000314 PTEN 0 . . . 5.14 79.39 14 4.47 No 44 0.52 No 0 0 No -46 0.48 No 46 52.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849962 - NM_032043 BRIP1 0 . . . 5.95 75.87 15 5.73 Yes 57 1.13 Yes 0 0 No -30 0.51 No 43 52.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215589004 - NM_000465 BARD1 0 . . . 1.75 69.51 25 5.09 No 69 -4.6 No 0 0 No -25 0.36 No 34 54.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131898531 + NM_005732 RAD50 0 . . . 0.37 68.54 36 8.24 Yes -2 0.3 No 0 0 No -35 0.92 Yes 52 54.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68923488 + NM_133509 RAD51B 0 . . . 0.44 64.38 38 5.45 No -1 0.17 No 0 0 No -37 0.84 Yes 59 50.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68545235 + NM_133509 RAD51B 0 . . . 5.11 70.08 20 4.35 No 23 1.66 Yes 0 0 No -23 0.39 No 43 73.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105184784 + NM_021930 RINT1 0 . . . 3.1 75.91 55 8.82 Yes 33 1.07 Yes 0 0 No -46 0.49 No 47 54.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69112874 + NM_133509 RAD51B 0 . . . 0.51 68.66 26 5.07 No 70 -6.46 No 0 0 No -25 0.89 Yes 49 46.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6022428 - NM_000535 PMS2 0 . . . 5.6 84.61 24 5.15 No 12 0.39 No 0 0 No -34 0.56 No 38 81.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69056735 + NM_133509 RAD51B 0 . . . 4.37 84.87 22 5.1 No 7 1.9 Yes 0 0 No -26 0.53 No 39 56.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108115412 + NM_000051 ATM 0 . . . 4.83 69.73 35 6.16 Yes 70 0.95 Yes 0 0 No -22 0.53 No 49 55.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41016902 + NM_001164269 RAD51 0 . . . 3.01 0 22 4.68 No 31 1.75 Yes 0 0 No -21 0.82 Yes 27 94.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105170976 + NM_021930 RINT1 0 . . . 0.36 63.4 65 9.84 Yes 57 -1.48 No 0 0 No -34 0.85 Yes 42 83.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37088047 + NM_000249 MLH1 0 . . . 12.13 90.62 43 7.91 Yes 67 1.29 Yes 0 0 No -31 0.89 Yes 42 78.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59877985 - NM_032043 BRIP1 0 . . . 6.34 76.84 19 5.83 Yes 31 0.63 No 0 0 No -27 0.81 Yes 46 72.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68297104 + NM_133509 RAD51B 0 . . . 2.16 71.41 21 5.09 No 62 -4.52 No 0 0 No -20 0.75 Yes 50 84.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41248201 - NM_007294 BRCA1 0 . . . 0.42 74.73 18 4.24 No 33 1.16 Yes 0 0 No -17 0.48 No 25 35.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75513424 - NM_001040108 MLH3 0 . . . 1.84 67.73 36 6.98 Yes 69 -3.09 No 0 0 No -35 0.31 No 29 69.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94158627 - NM_005591 MRE11 0 . . . 3.89 67.77 30 6.86 Yes 58 0.35 No 0 0 No -24 0.26 No 38 53.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108237759 + NM_000051 ATM 0 . . . 4.71 84.17 26 5.2 No 50 1.72 Yes 0 0 No -50 0.85 Yes 44 63.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37078699 + NM_000249 MLH1 0 . . . 3.51 68.35 26 5.09 No 53 -5.23 No 0 0 No -25 0.91 Yes 33 39.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190700020 + NM_000534 PMS1 0 . . . 0.38 71.24 30 5.93 Yes 58 -2.02 No 0 0 No -29 0.48 No 47 81.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152358083 - NM_005431 XRCC2 0 . . . 7.01 86.16 21 5.18 No 68 0.83 Yes 0 0 No -56 0.47 No 46 52.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68449302 + NM_133509 RAD51B 0 . . . 4.09 69.19 23 5.09 No 25 1.1 Yes 0 0 No -22 0.74 Yes 48 75.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68472453 + NM_133509 RAD51B 0 . . . 0.03 69.87 17 4.32 No 67 1.38 Yes 0 0 No -21 0.7 Yes 42 94.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68838630 + NM_004360 CDH1 0 . . . 4.73 80.92 33 5.83 Yes 32 0.83 Yes 0 0 No -32 0.49 No 26 71.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68925793 + NM_133509 RAD51B 0 . . . 10.08 86.66 16 5.47 No 73 -3.22 No 0 0 No -25 0.72 Yes 47 75.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105200760 + NM_021930 RINT1 0 . . . 1.4 70.39 20 4.58 No 67 0.78 Yes 0 0 No -19 0.96 Yes 38 86.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89674268 + NM_000314 PTEN 0 . . . 0.61 0 27 4.13 No 75 -4.89 No 0 0 No -26 0.88 Yes 46 40.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108145189 + NM_000051 ATM 0 . . . 4.15 69.34 29 4.72 No 68 1.32 Yes 0 0 No -28 0.69 Yes 16 45.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68746018 + NM_133509 RAD51B 0 . . . 4.85 85.76 21 4.84 No 52 0.74 No 0 0 No -30 0.54 No 37 76.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37083230 + NM_000249 MLH1 0 . . . 3.06 75.27 35 4.73 No 13 0.02 No 0 0 No -27 0.53 No 45 54.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41211221 - NM_007294 BRCA1 0 . . . 0.68 80.49 27 5.66 Yes 37 1.53 Yes 0 0 No -25 0.61 No 31 55.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104171639 - NM_001100119 XRCC3 0 . . . 2.1 0 16 4.69 No 18 1.38 Yes 0 0 No -21 0.53 No 40 77.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68547346 + NM_133509 RAD51B 0 . . . 6.8 79.59 32 7 Yes 14 0.86 Yes 0 0 No -31 0.49 No 44 91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68837299 + NM_004360 CDH1 0 . . . 1.66 84 22 4.8 No 60 -4.79 No 0 0 No -21 0.9 Yes 52 56.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59819097 - NM_032043 BRIP1 0 . . . 4.42 82.42 24 9.13 Yes 54 1.1 Yes 0 0 No -23 0.74 Yes 48 77.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47668280 + NM_000251 MSH2 0 . . . 2.08 76.83 20 6.05 Yes 44 0.97 Yes 0 0 No -22 0.55 No 33 83.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68649497 + NM_133509 RAD51B 0 . . . 1.25 53.61 28 5.06 No 48 2.16 Yes 0 0 No -23 0.56 No 48 33.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1205415 + NM_000455 STK11 0 . . . 3.35 66.81 26 6.61 Yes NA NA NA 0 0 No -25 0.61 No 42 36.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68978477 + NM_133509 RAD51B 0 . . . 0.52 0 25 5.38 No 72 -4.69 No 0 0 No -22 0.75 Yes 57 32.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108232158 + NM_000051 ATM 0 . . . 8.53 90.39 22 5.1 No 1 1.3 Yes 0 0 No -21 0.95 Yes 46 43.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94181202 - NM_005591 MRE11 0 . . . 3.17 64.12 36 7.11 Yes 23 0.71 No 0 0 No -31 0.6 No 35 83.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69014577 + NM_133509 RAD51B 0 . . . 3.87 0 24 6.5 Yes 34 1.5 Yes 0 0 No -23 0.5 No 51 44.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215635775 - NM_000465 BARD1 0 . . . 6.67 77.64 24 6.7 Yes 9 0.45 No 0 0 No -21 0.6 No 46 88.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152353729 - NM_005431 XRCC2 0 . . . 3.12 75.74 32 5.98 Yes 69 -6.29 No 0 0 No -31 0.66 No 50 93.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68326440 + NM_133509 RAD51B 0 . . . 10.21 90.77 34 4.53 No 73 -4 No 0 0 No -25 0.38 No 42 93.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68401368 + NM_133509 RAD51B 0 . . . 7.31 82.97 14 5.25 No 45 1.48 Yes 0 0 No -26 0.62 No 45 69.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94157664 - NM_005591 MRE11 0 . . . 0.71 66.73 28 5.47 No 73 0.97 Yes 0 0 No -25 0.42 No 30 60.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45803302 - NM_001048171 MUTYH 0 . . . 1.4 0 37 6.81 Yes 39 0.94 Yes 0 0 No -27 0.5 No 44 88.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23639883 - NM_024675 PALB2 0 . . . 0.79 70.32 11 4.1 No 1 1.08 Yes 0 0 No -26 0.37 No 47 75.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152355736 - NM_005431 XRCC2 0 . . . 0.05 0 25 4.83 No 13 0.58 No 0 0 No -41 0.47 No 54 52.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47786836 + NM_000251 MSH2 0 . . . 1.62 61.86 25 4.05 No 76 -1.98 No 0 0 No -24 0.54 No 46 49.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105193327 + NM_021930 RINT1 0 . . . 3.92 76.11 15 5.1 No 29 0.89 Yes 0 0 No -19 0.53 No 46 44.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190723416 + NM_000534 PMS1 0 . . . 3.77 77.36 21 5 No 53 0.51 No 0 0 No -18 0.64 No 47 80.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68852303 + NM_133509 RAD51B 0 . . . 2.5 63.18 50 6.42 Yes 43 1.11 Yes 0 0 No -35 0.37 No 51 54.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68794171 + NM_133509 RAD51B 0 . . . 8.37 81.44 41 6.54 Yes 46 0.97 Yes 0 0 No -17 0.63 No 27 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68656047 + NM_133509 RAD51B 0 . . . 4.52 79.02 16 5.2 No -2 0.14 No 0 0 No -23 0.2 No 45 64.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75493901 - NM_001040108 MLH3 0 . . . 3.89 65.42 11 4.12 No 41 0.43 No 0 0 No -18 0.33 No 29 62.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190686506 + NM_000534 PMS1 0 . . . 0.09 76.63 14 3.74 No 64 -4.8 No 0 0 No -27 0.63 No 55 40.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29099218 - NM_001005735 CHEK2 0 . . . 0.37 63.06 29 5.66 Yes 4 0.56 No 0 0 No -28 0.89 Yes 49 51.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32889169 + NM_000059 BRCA2 0 . . . 4.72 73.58 14 4 No 12 0.66 No 0 0 No -55 0.44 No 46 57.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47780923 + NM_000251 MSH2 0 . . . 1.78 68.73 14 4.86 No 2 0.44 No 0 0 No -20 0.92 Yes 56 49.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69079680 + NM_133509 RAD51B 0 . . . 2.95 74.51 34 6.03 Yes 9 1.3 Yes 0 0 No -33 0.56 No 49 90.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23646693 - NM_024675 PALB2 0 . . . 9.91 90.18 19 4.32 No 75 -3.36 No 0 0 No -22 0.62 No 50 62.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69030796 + NM_133509 RAD51B 0 . . . 0.32 62.11 28 5.39 No 67 -5.37 No 0 0 No -30 0.32 No 25 35.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131942314 + NM_005732 RAD50 0 . . . 4.23 75.51 51 6.86 Yes 2 2.15 Yes 0 0 No -23 0.62 No 56 68.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68909276 + NM_133509 RAD51B 0 . . . 2.6 76.85 21 4.58 No 33 0.99 Yes 0 0 No -57 0.41 No 50 55.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215640263 - NM_000465 BARD1 0 . . . 6.65 76.44 12 4.69 No 33 1.02 Yes 0 0 No -44 0.49 No 41 75.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32893867 + NM_000059 BRCA2 0 . . . 3.41 81.22 45 7.03 Yes 42 -4.46 No 0 0 No -21 0.52 No 50 44.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29097043 - NM_001005735 CHEK2 0 . . . 0.09 74.68 13 3.65 No 4 0.41 No 0 0 No -24 0.84 Yes 54 72.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105197025 + NM_021930 RINT1 0 . . . 3.55 76.46 23 3.65 No 4 0.87 Yes 0 0 No -22 0.72 Yes 45 47.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69097109 + NM_133509 RAD51B 0 . . . 0.92 83.79 22 5.6 Yes 52 0.91 Yes 0 0 No -24 0.54 No 32 69.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68802601 + NM_004360 CDH1 0 . . . 2.5 66.96 26 3.63 No 30 0.34 No 0 0 No -20 0.61 No 62 36.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105207150 + NM_021930 RINT1 0 . . . 3.7 0 18 4.06 No 3 0.14 No 0 0 No -28 0.35 No 54 36.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21980713 - NM_000077 CDKN2A 0 . . . 2.89 68.34 47 8.3 Yes 21 1.7 Yes 0 0 No -24 0.48 No 37 70.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68621512 + NM_133509 RAD51B 0 . . . 7.3 80.21 19 5.82 Yes 70 1.23 Yes 0 0 No -22 0.73 Yes 47 62.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68421889 + NM_133509 RAD51B 0 . . . 7.29 80.76 27 5.66 Yes 12 0.68 No 0 0 No -26 0.39 No 46 92.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190675979 + NM_000534 PMS1 0 . . . 0.85 72.17 17 5.65 Yes 1 0.3 No 0 0 No -22 0.89 Yes 46 90.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108225874 + NM_000051 ATM 0 . . . 4.7 79.08 14 5.2 No 61 0.28 No 0 0 No -17 0.35 No 46 85.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1230067 + NM_000455 STK11 0 . . . 3.6 83.3 32 5.25 No NA NA NA 0 0 No -25 0.7 Yes 48 57.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21994068 - NM_000077 CDKN2A 0 . . . 6.9 75.99 22 4.53 No 1 -0.62 No 32 0.26 Yes -21 0.57 No 38 76.91 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr11 108192396 + NM_000051 ATM 0 . . . 1.01 74.68 21 6.88 Yes 53 0.64 No 0 0 No -26 0.61 No 36 61.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68655489 + NM_133509 RAD51B 0 . . . 5.66 80.9 24 7.42 Yes 3 1.04 Yes 0 0 No -23 0.94 Yes 41 91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6038745 - NM_000535 PMS2 0 . . . 5.26 79.63 32 5.49 No 74 -4.16 No 0 0 No -31 0.64 No 37 51.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68513642 + NM_133509 RAD51B 0 . . . 4.54 62.45 15 3.64 No 74 -3.23 No 0 0 No -18 0.5 No 42 78.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68320251 + NM_133509 RAD51B 0 . . . 0.87 71 20 7.78 Yes 1 0.74 No 0 0 No -19 0.59 No 45 59.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215665283 - NM_000465 BARD1 0 . . . 1.51 70.01 21 5.71 Yes 2 0.5 No 0 0 No -28 0.4 No 46 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68455646 + NM_133509 RAD51B 0 . . . 0.25 0 20 5.83 Yes 39 0.64 No 0 0 No -27 0.56 No 53 86.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108175862 + NM_000051 ATM 0 . . . 2.68 77.08 15 5.37 No 61 0.14 No 0 0 No -55 0.69 Yes 47 95.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48027388 + NM_000179 MSH6 0 . . . 2.98 79.57 17 4.8 No 40 0.06 No 0 0 No -22 0.72 Yes 45 44.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215647690 - NM_000465 BARD1 0 . . . 8.25 78.88 32 5.63 Yes 24 0.65 No 0 0 No -32 0.33 No 45 69.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89692289 + NM_000314 PTEN 0 . . . 0.05 56.17 32 5.57 Yes 64 0.73 No 0 0 No -27 0.75 Yes 60 31.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108186367 + NM_000051 ATM 0 . . . 4.4 80.28 23 5.39 No 73 0.27 No 0 0 No -22 0.56 No 50 48.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69108735 + NM_133509 RAD51B 0 . . . 0.97 75.37 29 4.23 No 1 1.37 Yes 0 0 No -20 0.82 Yes 44 66.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69143327 + NM_133509 RAD51B 0 . . . 4.59 66.09 50 6.87 Yes 63 -4.14 No 0 0 No -27 0.71 Yes 35 47.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47769665 + NM_000251 MSH2 0 . . . 0.22 72.36 25 4.86 No 35 0.91 Yes 0 0 No -24 0.33 No 40 55.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94161529 - NM_005591 MRE11 0 . . . 2.59 65.55 36 6.42 Yes 31 0.6 No 0 0 No -36 0.54 No 39 89.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56793154 + NM_058216 RAD51C 0 . . . 0.2 72.5 19 6.5 Yes 69 0.01 No 0 0 No -29 0.8 Yes 45 43.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6009982 - NM_000535 PMS2 0 . . . 3.02 71.72 27 4.54 No 53 -4.3 No 0 0 No -26 0.94 Yes 44 81.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68854439 + NM_004360 CDH1 0 . . . 3.79 80.12 29 5.05 No 8 1.06 Yes 0 0 No -28 0.25 No 50 88.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90976463 - NM_002485 NBN 0 . . . 1.25 74.01 28 5.66 Yes 62 0.81 Yes 0 0 No -27 0.45 No 21 59.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68375696 + NM_133509 RAD51B 0 . . . 7.66 79.75 27 4.92 No 25 1.14 Yes 0 0 No -23 0.52 No 44 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90974101 - NM_002485 NBN 0 . . . 0.33 64.71 21 5.03 No 62 1.52 Yes 0 0 No -28 0.37 No 29 62.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75520132 - NM_001040108 MLH3 0 . . . 2.08 60.03 40 5.1 No -4 0.19 No 0 0 No -26 0.61 No 33 35.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68918652 + NM_133509 RAD51B 0 . . . 2.78 76.86 26 5.06 No 7 0.57 No 0 0 No -25 0.88 Yes 51 79.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190691639 + NM_000534 PMS1 0 . . . 7.26 82.76 16 4.69 No 8 0.35 No 0 0 No -5 0.3 No 43 57.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32937894 + NM_000059 BRCA2 0 . . . 0.31 62.57 27 5.74 Yes 13 -2.07 No 0 0 No -26 0.68 Yes 45 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90993568 - NM_002485 NBN 0 . . . 0.72 67.87 21 6.56 Yes 52 -4.18 No 0 0 No -20 0.93 Yes 40 63.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215648455 - NM_000465 BARD1 0 . . . 0.63 69.04 28 4.53 No 40 0.01 No 0 0 No -25 0.56 No 18 80.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59928562 - NM_032043 BRIP1 0 . . . 5.85 79.3 15 5.6 Yes 64 0.47 No 0 0 No -19 0.93 Yes 18 63.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68988179 + NM_133509 RAD51B 0 . . . 2.12 0 47 7.28 Yes 27 1.32 Yes 0 0 No -46 0.46 No 31 67.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131973077 + NM_005732 RAD50 0 . . . 7.68 93.03 45 6.45 Yes 67 0.81 Yes 0 0 No -27 0.44 No 53 44.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108149627 + NM_000051 ATM 0 . . . 0.57 78.22 12 4.8 No -4 0.72 No 0 0 No -26 0.68 Yes 50 65.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190655685 + NM_000534 PMS1 0 . . . 0.6 85.69 19 6.7 Yes 1 0.33 No 0 0 No -25 0.63 No 49 59.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69100109 + NM_133509 RAD51B 0 . . . 3.14 71.92 33 6.21 Yes 8 0.26 No 0 0 No -32 0.69 Yes 36 74.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75515589 - NM_001040108 MLH3 0 . . . 0.05 65.71 15 3.49 No 74 -5.15 No 0 0 No -49 0.33 No 44 48.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69134073 + NM_133509 RAD51B 0 . . . 6.42 94.27 23 4.69 No 4 0.82 Yes 0 0 No -21 0.69 Yes 54 68.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29122047 - NM_001005735 CHEK2 0 . . . 0.21 68.06 17 6.48 Yes 76 1.31 Yes 0 0 No -16 0.75 Yes 48 68.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47716104 + NM_000251 MSH2 0 . . . 2.07 71.3 13 5.75 Yes 21 1.3 Yes 0 0 No -20 0.51 No 37 55.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68690139 + NM_133509 RAD51B 0 . . . 1.78 67.79 16 7.18 Yes 74 0.73 No 0 0 No -22 0.61 No 47 93.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7588320 - NM_000546 TP53 0 . . . 6.57 81.17 23 5.1 No 20 1.17 Yes 0 0 No -23 0.86 Yes 38 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68994383 + NM_133509 RAD51B 0 . . . 3.8 74.65 17 5.29 No 36 1.01 Yes 0 0 No -28 0.4 No 32 63.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68685449 + NM_133509 RAD51B 0 . . . 3.28 63.48 33 5.74 Yes 11 0.21 No 0 0 No -26 0.87 Yes 47 84.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90989564 - NM_002485 NBN 0 . . . 0.29 67.65 20 4.14 No 63 -2.76 No 0 0 No -23 0.55 No 49 26.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32905868 + NM_000059 BRCA2 0 . . . 8.81 85.37 22 6.48 Yes 10 1.2 Yes 0 0 No -35 0.45 No 48 72.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23612876 - NM_024675 PALB2 0 . . . 0.59 78.8 32 4.83 No 2 0.4 No 0 0 No -31 0.91 Yes 23 58.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104163232 - NM_001100119 XRCC3 0 . . . 2.26 70.19 20 4.59 No NA NA NA 0 0 No -26 0.8 Yes 51 39.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47750622 + NM_000251 MSH2 0 . . . 5.67 84.13 37 6.16 Yes 34 -0.8 No 0 0 No -36 0.75 Yes 50 61.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190696667 + NM_000534 PMS1 0 . . . 0.42 74.73 27 5.19 No 74 1.18 Yes 0 0 No -26 0.9 Yes 42 61.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68859733 + NM_004360 CDH1 0 . . . 12.03 92.63 18 5.16 No 42 1.63 Yes 0 0 No -53 0.4 No 34 82.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68616043 + NM_133509 RAD51B 0 . . . 4.51 71.99 29 5.45 No 53 0.19 No 0 0 No -28 0.66 No 29 67.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59802123 - NM_032043 BRIP1 0 . . . 0.18 0 23 4.5 No 29 0.65 No 0 0 No -40 0.71 Yes 44 81.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69002634 + NM_133509 RAD51B 0 . . . 1.02 73.88 27 5.16 No 75 -4.58 No 0 0 No -56 0.89 Yes 46 63.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867319 - NM_032043 BRIP1 0 . . . 4.19 73.34 55 6.78 Yes 41 -2 No 0 0 No -26 0.78 Yes 44 89.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68775802 + NM_133509 RAD51B 0 . . . 5.53 73.61 17 4.8 No 8 0.91 Yes 0 0 No -20 0.46 No 39 77.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69110037 + NM_133509 RAD51B 0 . . . 4.26 60.69 25 6.32 Yes 34 1.1 Yes 0 0 No -24 0.82 Yes 42 82.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215653489 - NM_000465 BARD1 0 . . . 3.66 78.65 25 5.29 No 11 0.77 Yes 0 0 No -27 0.56 No 47 71.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59856817 - NM_032043 BRIP1 0 . . . 4.07 85.02 15 3.26 No 53 -1.88 No 0 0 No -23 0.39 No 52 74.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75482428 - NM_001040108 MLH3 0 . . . 6.38 82.85 46 5.06 No 1 0.76 No 0 0 No -21 0.78 Yes 44 81.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32942569 + NM_000059 BRCA2 0 . . . 6.74 80.19 37 6.4 Yes 17 1.53 Yes 0 0 No -36 0.77 Yes 41 55.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48016911 + NM_000179 MSH6 0 . . . 2.34 63.15 10 4 No 44 0.81 Yes 0 0 No -29 0.42 No 14 60.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41262458 - NM_007294 BRCA1 0 . . . 0.29 71.07 29 5.54 No 39 0.57 No 0 0 No -28 0.71 Yes 48 58.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131980745 + NM_005732 RAD50 0 . . . 10.5 90.6 46 5.42 No 10 1.45 Yes 0 0 No -36 0.66 No 48 92.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104178879 - NM_001100119 XRCC3 0 . . . 9.53 87.53 29 5.48 No 17 -0.09 No 0 0 No -28 0.91 Yes 41 49.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69057334 + NM_133509 RAD51B 0 . . . 7.98 92.27 21 5.09 No 3 1.05 Yes 0 0 No -20 0.75 Yes 50 50.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68860911 + NM_133509 RAD51B 0 . . . 5.69 77.61 13 4 No 10 0.78 Yes 0 0 No -12 0.57 No 44 85.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69076116 + NM_133509 RAD51B 0 . . . 4.74 83.41 29 5.06 No 9 0.73 No 0 0 No -28 0.77 Yes 49 45.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68325435 + NM_133509 RAD51B 0 . . . 3.48 0 19 5.97 Yes 8 0.23 No 0 0 No -27 0.84 Yes 50 79.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108154877 + NM_000051 ATM 0 . . . 2.06 68.39 16 4.69 No 3 0.5 No 0 0 No -22 0.85 Yes 48 53.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68565922 + NM_133509 RAD51B 0 . . . 2.73 78.97 23 5.32 No 41 1.59 Yes 0 0 No -27 0.45 No 17 62.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56799354 + NM_058216 RAD51C 0 . . . 2.35 66.32 20 5.57 Yes 33 0.99 Yes 0 0 No -24 0.39 No 36 89.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68655563 + NM_133509 RAD51B 0 . . . 3.52 82.2 12 5 No 15 0.85 Yes 0 0 No -23 0.33 No 51 64.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41017765 + NM_001164269 RAD51 0 . . . 4.72 77.98 23 5.29 No 59 0.69 No 0 0 No -19 0.29 No 48 62.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108108484 + NM_000051 ATM 0 . . . 2.27 70.56 24 5.29 No 70 -5.68 No 0 0 No -23 0.81 Yes 45 72.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190683842 + NM_000534 PMS1 0 . . . 5.33 64.95 43 6.29 Yes 38 0.78 Yes 0 0 No -27 0.64 No 42 45.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104181914 - NM_001100119 XRCC3 0 . . . 7.06 85.8 23 5.26 No 44 -1.44 No 0 0 No -22 0.83 Yes 27 27.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37047429 + NM_000249 MLH1 0 . . . 5.88 71.97 67 8.48 Yes 22 1.7 Yes 0 0 No -19 0.31 No 47 67.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47708823 + NM_000251 MSH2 0 . . . 6.25 83.82 26 6.19 Yes 7 0.99 Yes 0 0 No -25 0.94 Yes 51 77.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47657523 + NM_000251 MSH2 0 . . . 3.39 71.29 19 5.62 Yes -4 1.48 Yes 0 0 No -28 0.77 Yes 45 79.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84389289 - NM_139076 FAM175A 0 . . . 4.6 86.46 70 8.84 Yes 9 1.23 Yes 0 0 No -34 0.76 Yes 49 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32944940 + NM_000059 BRCA2 0 . . . 0.98 77.24 57 7.01 Yes 32 1.12 Yes 0 0 No -30 0.55 No 26 39.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108130096 + NM_000051 ATM 0 . . . 4.26 69.25 25 5.36 No 56 1.22 Yes 0 0 No -24 0.85 Yes 43 54.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32939218 + NM_000059 BRCA2 0 . . . 8.02 83.26 18 3.9 No 30 0.39 No 0 0 No -21 0.78 Yes 46 80.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68655167 + NM_133509 RAD51B 0 . . . 12.96 90.3 32 5.92 Yes NA NA NA 0 0 No -31 0.43 No 32 74.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68310348 + NM_133509 RAD51B 0 . . . 1.15 0 13 4.84 No 59 0.41 No 0 0 No -26 0.86 Yes 46 91.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41000900 + NM_001164269 RAD51 0 . . . 3.46 75.37 32 5.66 Yes 76 1.42 Yes 0 0 No -29 0.31 No 50 85.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69128544 + NM_133509 RAD51B 0 . . . 5.45 79.67 21 5 No 20 1.46 Yes 0 0 No -18 0.65 No 38 85.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190701629 + NM_000534 PMS1 0 . . . 2.98 76.6 19 4.8 No -3 0.78 Yes 0 0 No -18 0.65 No 37 53.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68816563 + NM_004360 CDH1 0 . . . 0.51 0 28 5.38 No 43 0.64 No 0 0 No -27 0.47 No 53 80.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68849738 + NM_133509 RAD51B 0 . . . 1.22 77.95 16 5.52 No 53 0.82 Yes 0 0 No -24 0.54 No 36 84.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68507850 + NM_133509 RAD51B 0 . . . 1.22 69.17 40 6.99 Yes 51 0.5 No 0 0 No -33 0.64 No 48 96.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94193492 - NM_005591 MRE11 0 . . . 2.41 66.84 60 5.64 Yes 8 0.68 No 0 0 No -22 0.31 No 50 69.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68423724 + NM_133509 RAD51B 0 . . . 3.65 78.11 9 3.87 No 55 0.51 No 0 0 No -20 0.28 No 47 62.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68493977 + NM_133509 RAD51B 0 . . . 7.89 76.76 33 6.71 Yes 2 2.04 Yes 0 0 No -32 0.69 Yes 48 49.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32900532 + NM_000059 BRCA2 0 . . . 5.81 90.17 32 5.57 Yes 27 0.26 No 0 0 No -26 0.34 No 47 57.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896951 - NM_032043 BRIP1 0 . . . 3.31 72.61 16 3.71 No -4 1.53 Yes 0 0 No -20 0.32 No 44 77.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68593318 + NM_133509 RAD51B 0 . . . 2.54 76.84 14 5.11 No 1 0.21 No 0 0 No -21 0.65 No 53 43.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37080036 + NM_000249 MLH1 0 . . . 1.92 64.23 34 5.74 Yes 37 0.98 Yes 0 0 No -26 0.38 No 48 91.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68697433 + NM_133509 RAD51B 0 . . . 3.51 86.85 10 4 No 52 -2.79 No 0 0 No -32 0.43 No 47 90.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29132682 - NM_001005735 CHEK2 0 . . . 3.52 70.85 32 5.83 Yes 18 0.5 No 0 0 No -24 0.71 Yes 40 93.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108172136 + NM_000051 ATM 0 . . . 2.72 71.41 58 6.65 Yes 9 0.4 No 0 0 No -26 0.73 Yes 49 45.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37082938 + NM_000249 MLH1 0 . . . 3.41 75.05 20 6.56 Yes 65 0.85 Yes 0 0 No -19 0.72 Yes 48 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47679734 + NM_000251 MSH2 0 . . . 1.3 69.34 23 5.74 Yes -4 0.24 No 0 0 No -26 0.53 No 45 22.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69085004 + NM_133509 RAD51B 0 . . . 0.31 0 38 7.62 Yes 13 1.81 Yes 0 0 No -37 0.85 Yes 45 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41263738 - NM_007294 BRCA1 0 . . . 5.21 84.22 15 5.31 No 33 1.04 Yes 0 0 No -24 0.69 Yes 50 90.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90978914 - NM_002485 NBN 0 . . . 7.48 78.23 20 6.55 Yes -4 -0.66 No 0 0 No -26 0.79 Yes 36 65.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89707167 + NM_000314 PTEN 0 . . . 4.37 73.55 51 5.18 No 72 -3.63 No 0 0 No -42 0.77 Yes 45 63.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23627860 - NM_024675 PALB2 0 . . . 0.71 74.47 20 4.38 No 5 -1.58 No 0 0 No -17 0.65 No 50 78.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6019047 - NM_000535 PMS2 0 . . . 2.2 74.18 21 4.68 No 73 0.68 No 0 0 No -20 0.63 No 45 50.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190667075 + NM_000534 PMS1 0 . . . 2.67 60.16 19 5.6 Yes 66 1.82 Yes 0 0 No -27 0.72 Yes 45 74.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68984749 + NM_133509 RAD51B 0 . . . 3.64 75.71 43 5.49 No -4 0.45 No 0 0 No -22 0.44 No 51 58.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68818860 + NM_133509 RAD51B 0 . . . 6.17 86.46 31 5.6 Yes 4 0.42 No 0 0 No -30 0.88 Yes 47 52.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460824 + NM_133509 RAD51B 0 . . . 3.05 77.47 27 5.57 Yes 52 0.53 No 0 0 No -26 0.87 Yes 49 54.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68633856 + NM_133509 RAD51B 0 . . . 1.34 71.27 42 6.97 Yes 34 0.23 No 0 0 No -26 0.61 No 47 80.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89628545 + NM_000314 PTEN 0 . . . 2.69 0 33 6.18 Yes 6 0.74 No 0 0 No -32 0.82 Yes 52 61.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215615769 - NM_000465 BARD1 0 . . . 1.36 0 26 8.88 Yes -2 0.22 No 0 0 No -25 0.65 No 42 43.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69132239 + NM_133509 RAD51B 0 . . . 6.01 79.3 24 5.83 Yes 68 -1.77 No 0 0 No -23 0.75 Yes 21 70.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108112178 + NM_000051 ATM 0 . . . 3.62 73.38 22 5.29 No 66 1.15 Yes 0 0 No -21 0.79 Yes 32 58.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59891186 - NM_032043 BRIP1 0 . . . 1.09 83.23 36 6.32 Yes 4 0.4 No 0 0 No -20 0.6 No 51 35.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6034330 - NM_000535 PMS2 0 . . . 3.66 85.81 20 5.07 No 9 1.03 Yes 0 0 No -19 0.38 No 49 91.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59868942 - NM_032043 BRIP1 0 . . . 0.54 69.68 17 4.94 No 3 -1.1 No 0 0 No -23 0.92 Yes 63 33.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68984394 + NM_133509 RAD51B 0 . . . 2.7 78.44 30 5.39 No 49 0.2 No 0 0 No -29 0.81 Yes 47 54.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68643130 + NM_133509 RAD51B 0 . . . 4.81 73.01 18 4.9 No 51 0.68 No 0 0 No -43 0.58 No 45 70.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108100538 + NM_000051 ATM 0 . . . 3.1 73.12 11 5 No 35 1.05 Yes 0 0 No -18 0.65 No 40 82.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59911582 - NM_032043 BRIP1 0 . . . 3.21 53.97 21 5.43 No 55 -2.61 No 0 0 No -23 0.46 No 28 75.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41227863 - NM_007294 BRCA1 0 . . . 5.31 71.43 29 5.95 Yes 18 0.48 No 0 0 No -28 0.69 Yes 40 87.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68579694 + NM_133509 RAD51B 0 . . . 3.79 71.1 15 4.46 No 23 -2.44 No 0 0 No -31 0.55 No 43 57.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33440936 - NM_002878 RAD51D 0 . . . 1.83 71.04 18 4.63 No 0 0.1 No 0 0 No -17 0.64 No 35 60.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89653476 + NM_000314 PTEN 0 . . . 5.21 0 21 3.73 No 47 1.41 Yes 0 0 No -20 0.66 Yes 43 55.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33446351 - NM_002878 RAD51D 0 . . . 4.9 86.03 29 5.92 Yes 18 0.32 No 0 0 No -28 0.87 Yes 51 48.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59933247 - NM_032043 BRIP1 0 . . . 1.16 0 14 4.72 No 71 1.32 Yes 0 0 No -21 0.85 Yes 23 65.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68776444 + NM_133509 RAD51B 0 . . . 3.31 84.03 17 4.12 No 9 0.63 No 0 0 No -25 0.48 No 49 76.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68374423 + NM_133509 RAD51B 0 . . . 6.23 73.83 11 5.1 No 63 1.27 Yes 0 0 No -21 0.49 No 48 38.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47680113 + NM_000251 MSH2 0 . . . 2.97 72.02 27 5.42 No -3 0.12 No 0 0 No -26 0.88 Yes 12 38.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6040682 - NM_000535 PMS2 0 . . . 2.04 71.91 17 3.07 No 72 1.32 Yes 0 0 No -24 0.73 Yes 47 54.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59785114 - NM_032043 BRIP1 0 . . . 0.45 0 32 7.39 Yes NA NA NA 0 0 No -27 0.41 No 49 60.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68427570 + NM_133509 RAD51B 0 . . . 6.88 85.67 26 5.26 No 7 1.22 Yes 0 0 No -26 0.59 No 51 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94156925 - NM_005591 MRE11 0 . . . 6.54 80.96 14 5 No 65 -3.12 No 0 0 No -59 0.76 Yes 41 75.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68961760 + NM_133509 RAD51B 0 . . . 2.73 76.39 50 6.43 Yes 51 1.15 Yes 0 0 No -25 0.32 No 55 35.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89651943 + NM_000314 PTEN 0 . . . 4.32 89.69 33 5.68 Yes 50 0.92 Yes 0 0 No -32 0.51 No 50 67.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41263812 - NM_007294 BRCA1 0 . . . 3.61 84.17 33 7.89 Yes 70 1.7 Yes 0 0 No -32 0.73 Yes 44 44.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190716764 + NM_000534 PMS1 0 . . . 0.14 65.52 14 4.36 No 20 0.32 No 0 0 No -20 0.49 No 38 91.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47801742 + NM_000251 MSH2 0 . . . 3.19 75.88 36 4.98 No 4 1.35 Yes 0 0 No -19 0.42 No 54 85.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68371637 + NM_133509 RAD51B 0 . . . 7.08 76.56 33 4.42 No 11 1.09 Yes 0 0 No -32 0.26 No 47 85.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68756536 + NM_133509 RAD51B 0 . . . 1.38 73.98 19 4.5 No 40 0.64 No 0 0 No -16 0.57 No 30 47.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59875085 - NM_032043 BRIP1 0 . . . 6.99 75.18 16 5.02 No 43 1.64 Yes 0 0 No -21 0.59 No 40 93.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23625357 - NM_024675 PALB2 0 . . . 0.53 71.37 17 4 No 72 0.41 No 0 0 No -37 0.73 Yes 49 56.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68768966 + NM_133509 RAD51B 0 . . . 2.17 65.4 16 4.07 No 42 -2.81 No 0 0 No -16 0.56 No 50 70 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68651915 + NM_133509 RAD51B 0 . . . 4.33 77.99 12 4.11 No 6 0.26 No 0 0 No -24 0.44 No 52 70.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7582809 - NM_000546 TP53 0 . . . 4.41 74.85 37 6.32 Yes 18 1.1 Yes 0 0 No -36 0.72 Yes 44 56.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68921811 + NM_133509 RAD51B 0 . . . 2.17 81 66 7.34 Yes -4 0.58 No 0 0 No -28 0.64 No 50 76.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68670321 + NM_133509 RAD51B 0 . . . 4.27 76.75 16 5.83 Yes 4 0.24 No 0 0 No -27 0.79 Yes 50 38.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104166481 - NM_001100119 XRCC3 0 . . . 2.33 0 21 5.2 No 8 0.64 No 0 0 No -21 0.5 No 50 77.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89732938 + NM_000314 PTEN 0 . . . 5.93 89.49 14 4.19 No 0 1.22 Yes 0 0 No -23 0.74 Yes 43 50.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32968400 + NM_000059 BRCA2 0 . . . 4.46 77.41 17 4.69 No 1 1.64 Yes 0 0 No -28 0.41 No 49 81.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68544132 + NM_133509 RAD51B 0 . . . 5.47 76.2 34 5.13 No 3 0.51 No 0 0 No -33 0.75 Yes 47 54.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37050568 + NM_000249 MLH1 0 . . . 10.02 90.3 22 5.29 No -2 0.24 No 0 0 No -27 0.55 No 43 69.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32971319 + NM_000059 BRCA2 0 . . . 1.83 64.31 26 5.22 No 49 -3.5 No 0 0 No -31 0.39 No 34 81.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68876874 + NM_133509 RAD51B 0 . . . 5.58 78.49 17 4.8 No 59 0.44 No 0 0 No -16 0.64 No 48 74.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69109613 + NM_133509 RAD51B 0 . . . 1.86 70.05 17 4.8 No 28 0.84 Yes 0 0 No -24 0.77 Yes 45 80.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108231034 + NM_000051 ATM 0 . . . 0.36 56.82 27 6.63 Yes -4 0.12 No 0 0 No -22 0.47 No 48 30.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105186539 + NM_021930 RINT1 0 . . . 2.5 70.85 19 5 No 23 1.41 Yes 0 0 No -47 0.39 No 43 38.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94208469 - NM_005591 MRE11 0 . . . 6.74 71.55 40 6.38 Yes 28 0.61 No 0 0 No -24 0.45 No 34 73.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32928111 + NM_000059 BRCA2 0 . . . 5.14 83.67 13 4.36 No 51 -2.58 No 0 0 No -37 0.73 Yes 50 43.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89721552 + NM_000314 PTEN 0 . . . 8.05 73.19 19 5.16 No 72 2.47 Yes 0 0 No -42 0.37 No 45 83.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89712096 + NM_000314 PTEN 0 . . . 1.22 56.12 24 5.49 No 49 1.06 Yes 0 0 No -26 0.64 No 56 38.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29090905 - NM_001005735 CHEK2 0 . . . 5.43 74.83 26 4.87 No 27 0.16 No 0 0 No -18 0.41 No 50 76.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94158128 - NM_005591 MRE11 0 . . . 5.77 72.79 33 5.61 Yes 33 1.05 Yes 0 0 No -32 0.58 No 47 38.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33438234 - NM_002878 RAD51D 0 . . . 5.64 85.02 22 5.9 Yes 6 1.86 Yes 0 0 No -25 0.42 No 52 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45800730 - NM_001048171 MUTYH 0 . . . 0.07 0 29 6.3 Yes 70 -2.49 No 0 0 No -28 0.77 Yes 39 63.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68516426 + NM_133509 RAD51B 0 . . . 8.74 93.84 17 4.44 No 22 0.13 No 0 0 No -16 0.73 Yes 36 95.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108197597 + NM_000051 ATM 0 . . . 4.71 84.17 24 5.39 No 51 1.51 Yes 0 0 No -28 0.58 No 24 56.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108122446 + NM_000051 ATM 0 . . . 1.91 0 33 5.92 Yes 42 0.5 No 0 0 No -32 0.94 Yes 32 51.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59836758 - NM_032043 BRIP1 0 . . . 3.34 77.68 23 5.38 No 24 0.74 No 0 0 No -22 0.67 Yes 49 27.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68752392 + NM_133509 RAD51B 0 . . . 0.02 0 18 4.87 No 20 1.46 Yes 0 0 No -17 0.66 No 49 63.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131900464 + NM_005732 RAD50 0 . . . 8.14 88.4 21 4.98 No 10 0.18 No 0 0 No -24 0.79 Yes 48 94.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131979835 + NM_005732 RAD50 0 . . . 0.88 67.53 17 5.29 No 64 0.61 No 0 0 No -16 0.45 No 44 71.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69136604 + NM_133509 RAD51B 0 . . . 5.06 76.94 23 5 No 32 -2.39 No 0 0 No -22 0.96 Yes 47 37.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215589767 - NM_000465 BARD1 0 . . . 1.18 61.9 23 5.7 Yes 19 1.85 Yes 0 0 No -22 0.51 No 32 63.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190687054 + NM_000534 PMS1 0 . . . 2.44 67.38 40 6.54 Yes 13 0.8 Yes 0 0 No -39 0.79 Yes 45 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23625636 - NM_024675 PALB2 0 . . . 1.43 0 20 4.61 No 15 0.18 No 0 0 No -22 0.76 Yes 43 55.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90971532 - NM_002485 NBN 0 . . . 1.64 72.11 24 5 No 44 0.67 No 0 0 No -23 0.66 No 47 65.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108226442 + NM_000051 ATM 0 . . . 3.81 70.49 27 3.4 No 4 0.14 No 0 0 No -21 0.62 No 54 56.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190733379 + NM_000534 PMS1 0 . . . 1.94 68.2 20 5.1 No 62 -2.16 No 0 0 No -23 0.63 No 30 75.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190670458 + NM_000534 PMS1 0 . . . 4.26 80.74 15 5.39 No 64 -3.72 No 0 0 No -28 0.23 No 49 79.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94227494 - NM_005591 MRE11 0 . . . 0.01 67.93 23 4.94 No -4 0.62 No 0 0 No -22 0.9 Yes 16 45.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59823478 - NM_032043 BRIP1 0 . . . 1.48 65.69 19 5.57 Yes 34 1.69 Yes 0 0 No -18 0.38 No 48 57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90963166 - NM_002485 NBN 0 . . . 2.15 0 41 6.63 Yes 66 0.27 No 0 0 No -40 0.46 No 36 69.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68887553 + NM_133509 RAD51B 0 . . . 6.97 90.01 25 4.87 No 68 2.17 Yes 0 0 No -34 0.63 No 54 57.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40989697 + NM_001164269 RAD51 0 . . . 8.33 84.75 16 6.86 Yes 75 0.64 No 0 0 No -28 0.59 No 47 89.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41279210 - NM_007294 BRCA1 0 . . . 5 81.66 14 5.99 Yes 56 -2.7 No 0 0 No -31 0.48 No 20 32.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1206696 + NM_000455 STK11 0 . . . 8.41 74.48 23 5.29 No 27 1.12 Yes 0 0 No -28 0.48 No 31 76.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68377485 + NM_133509 RAD51B 0 . . . 5.28 74.71 23 4.8 No 8 0.81 Yes 0 0 No -22 0.77 Yes 36 63.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94152210 - NM_005591 MRE11 0 . . . 5.84 80.65 19 5.74 Yes 7 1.06 Yes 0 0 No -28 0.74 Yes 51 78.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68825456 + NM_004360 CDH1 0 . . . 1.86 0 23 4.98 No 45 0.99 Yes 0 0 No -23 0.49 No 38 67.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68302369 + NM_133509 RAD51B 0 . . . 1.8 74.68 20 5 No 35 0.43 No 0 0 No -19 0.69 Yes 23 47.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29089763 - NM_001005735 CHEK2 0 . . . 1.09 63.37 37 5.07 No 16 0.9 Yes 0 0 No -36 0.61 No 42 87.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47671294 + NM_000251 MSH2 0 . . . 6.47 76.39 13 5.38 No 23 0.94 Yes 0 0 No -30 0.5 No 44 54.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29094215 - NM_001005735 CHEK2 0 . . . 9.83 85.86 27 5.2 No 10 1.37 Yes 0 0 No -24 0.62 No 48 73.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94217612 - NM_005591 MRE11 0 . . . 5.27 67.81 23 4.96 No 47 0.06 No 0 0 No -22 0.96 Yes 53 52.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68489689 + NM_133509 RAD51B 0 . . . 4.18 73.07 12 4.69 No 35 0.68 No 0 0 No -24 0.7 Yes 46 72.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29131942 - NM_001005735 CHEK2 0 . . . 2.85 81.52 35 5.1 No 32 0.78 Yes 0 0 No -34 0.6 No 26 51.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40997823 + NM_001164269 RAD51 0 . . . 0.47 83.57 48 8.82 Yes 23 1.63 Yes 0 0 No -15 0.21 No 35 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59898007 - NM_032043 BRIP1 0 . . . 7.7 85.3 22 4.9 No 71 0.84 Yes 0 0 No -19 0.7 Yes 31 67.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68928603 + NM_133509 RAD51B 0 . . . 6.61 72.95 28 5.13 No 63 -2.94 No 0 0 No -27 0.81 Yes 46 48.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68816764 + NM_004360 CDH1 0 . . . 3.62 0 27 3.99 No 62 1.52 Yes 0 0 No -26 0.35 No 49 87.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6045747 - NM_000535 PMS2 0 . . . 4.45 79.74 15 4.58 No 71 0.39 No 0 0 No -32 0.63 No 51 53.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59796920 - NM_032043 BRIP1 0 . . . 5.99 85.02 28 5.34 No 6 1.26 Yes 0 0 No -27 0.59 No 52 82.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41242623 - NM_007294 BRCA1 0 . . . 1.51 76.55 15 5.49 No 52 0.44 No 0 0 No -22 0.84 Yes 28 45.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6027924 - NM_000535 PMS2 0 . . . 4.81 66.81 44 6.92 Yes 45 0.41 No 0 0 No -31 0.42 No 49 38.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108180073 + NM_000051 ATM 0 . . . 1.39 60.44 24 5.31 No 67 0.59 No 0 0 No -23 0.29 No 51 54.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68587199 + NM_133509 RAD51B 0 . . . 1.39 86.94 24 4.9 No 40 -2.07 No 0 0 No -26 0.52 No 43 86.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47728275 + NM_000251 MSH2 0 . . . 3.75 84.95 17 4 No 24 -0.94 No 0 0 No -52 0.75 Yes 20 60.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68667451 + NM_133509 RAD51B 0 . . . 2.47 66.2 21 3.15 No 67 0.9 Yes 0 0 No -19 0.56 No 53 68.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68823763 + NM_133509 RAD51B 0 . . . 0.57 67.21 16 5.01 No 23 0.62 No 0 0 No -26 0.75 Yes 49 54.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68986440 + NM_133509 RAD51B 0 . . . 0.31 63.67 33 7.14 Yes 17 0.75 No 0 0 No -32 0.61 No 41 83.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75490795 - NM_001040108 MLH3 0 . . . 1.73 67.12 17 5.29 No 2 0.87 Yes 0 0 No -21 0.65 No 42 62.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215642396 - NM_000465 BARD1 0 . . . 1.79 74.63 25 6.35 Yes -3 0.91 Yes 0 0 No -24 0.96 Yes 46 64.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47777799 + NM_000251 MSH2 0 . . . 1.14 83.52 50 8.17 Yes 37 1.53 Yes 0 0 No -52 0.42 No 31 75.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68332518 + NM_133509 RAD51B 0 . . . 3.68 70.85 22 4.59 No 21 1.71 Yes 0 0 No -20 0.46 No 37 71.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89729925 + NM_000314 PTEN 0 . . . 5.12 70.87 22 4.62 No 41 1.09 Yes 0 0 No -21 0.5 No 40 38.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68601812 + NM_133509 RAD51B 0 . . . 0.1 0 15 4.61 No 51 0.92 Yes 0 0 No -54 0.61 No 52 26.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68826827 + NM_004360 CDH1 0 . . . 9.12 88.6 20 4.97 No 2 1.28 Yes 0 0 No -18 0.5 No 42 79.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68861802 + NM_004360 CDH1 0 . . . 5.61 83.29 37 7.68 Yes 75 1.76 Yes 0 0 No -52 0.42 No 37 97.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68704570 + NM_133509 RAD51B 0 . . . 0.91 80.91 26 5.1 No 32 1.03 Yes 0 0 No -55 0.91 Yes 50 43.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105193879 + NM_021930 RINT1 0 . . . 2.35 72.1 46 5.6 Yes 29 0.7 No 0 0 No -41 0.47 No 29 80.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68842682 + NM_133509 RAD51B 0 . . . 4.1 78.78 23 4.78 No 5 0.58 No 0 0 No -22 0.77 Yes 50 59.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68570636 + NM_133509 RAD51B 0 . . . 0.24 73.35 47 8.33 Yes 12 0.18 No 0 0 No -23 0.33 No 46 79.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68576282 + NM_133509 RAD51B 0 . . . 4.41 83.71 13 5.2 No 69 -1.97 No 0 0 No -22 0.69 Yes 49 77.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152349899 - NM_005431 XRCC2 0 . . . 2.69 69.31 24 5.48 No 58 1.34 Yes 0 0 No -23 0.81 Yes 44 43.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37068566 + NM_000249 MLH1 0 . . . 2.06 73.41 28 11.21 Yes 69 -4.97 No 0 0 No -28 0.64 No 37 77.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59811763 - NM_032043 BRIP1 0 . . . 2.53 64.48 27 5.48 No 72 0.89 Yes 0 0 No -33 0.46 No 43 79.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68359025 + NM_133509 RAD51B 0 . . . 7.64 84.47 19 6.09 Yes 73 -3.85 No 0 0 No -24 0.39 No 42 54.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75499104 - NM_001040108 MLH3 0 . . . 1.71 61.55 42 6.39 Yes 52 1.16 Yes 0 0 No -26 0.59 No 34 73.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68354691 + NM_133509 RAD51B 0 . . . 1.56 78.15 39 6.17 Yes 3 0.55 No 0 0 No -38 0.66 No 45 84.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32901555 + NM_000059 BRCA2 0 . . . 2.39 76.63 20 6.85 Yes 58 -3.88 No 0 0 No -26 0.45 No 43 53.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69067230 + NM_133509 RAD51B 0 . . . 2.79 79.23 37 4.63 No 59 0.32 No 0 0 No -21 0.6 No 50 26.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69055814 + NM_133509 RAD51B 0 . . . 0.43 73.73 25 5.39 No 40 1.3 Yes 0 0 No -24 0.72 Yes 50 91.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108215276 + NM_000051 ATM 0 . . . 5.23 72.89 35 5.86 Yes 8 0.3 No 0 0 No -34 0.88 Yes 50 72.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32921806 + NM_000059 BRCA2 0 . . . 1.11 72.95 35 6.06 Yes 76 -5.67 No 0 0 No -34 0.44 No 47 35.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6027519 - NM_000535 PMS2 0 . . . 2.78 80.12 28 4.25 No 7 1.16 Yes 0 0 No -27 0.59 No 51 77.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69124084 + NM_133509 RAD51B 0 . . . 1.53 84.03 38 6.31 Yes 38 0.88 Yes 0 0 No -32 0.52 No 51 61.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131930671 + NM_005732 RAD50 0 . . . 4.6 67.75 55 8.24 Yes 1 0.74 No 0 0 No -23 0.73 Yes 42 38.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190733887 + NM_000534 PMS1 0 . . . 2.44 75.67 24 4.8 No 56 -4.24 No 0 0 No -24 0.38 No 46 67.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32944269 + NM_000059 BRCA2 0 . . . 2.94 68.86 19 5.44 No 21 0.08 No 0 0 No -21 0.78 Yes 34 51.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68928954 + NM_133509 RAD51B 0 . . . 1.1 65.79 36 6.16 Yes 21 0.54 No 0 0 No -35 0.42 No 33 92.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84403962 - NM_139076 FAM175A 0 . . . 0.21 0 15 5.2 No -4 0.72 No 0 0 No -20 0.3 No 62 26.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68373852 + NM_133509 RAD51B 0 . . . 6.12 80.63 56 8.8 Yes 76 0.81 Yes 0 0 No -25 0.87 Yes 47 80.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94170848 - NM_005591 MRE11 0 . . . 5.89 66.54 14 4.9 No 70 -3.08 No 0 0 No -43 0.51 No 43 62.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68300343 + NM_133509 RAD51B 0 . . . 2.91 84.98 13 5.47 No 0 0.3 No 0 0 No -48 0.88 Yes 49 53.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90991625 - NM_002485 NBN 0 . . . 5.15 68.68 16 4.12 No 59 -4.91 No 0 0 No -24 0.79 Yes 44 79.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90963913 - NM_002485 NBN 0 . . . 1.03 68.44 30 5.83 Yes 62 -1.85 No 0 0 No -27 0.76 Yes 43 49.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68565022 + NM_133509 RAD51B 0 . . . 1.45 76.6 36 6.08 Yes 36 2.12 Yes 0 0 No -30 0.7 Yes 22 76.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68427368 + NM_133509 RAD51B 0 . . . 2.53 80.78 21 5.2 No 57 -5.8 No 0 0 No -39 0.95 Yes 48 47.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59776541 - NM_032043 BRIP1 0 . . . 1.03 67.29 21 5.21 No 73 -6.5 No 0 0 No -20 0.65 No 46 53.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59781763 - NM_032043 BRIP1 0 . . . 2.06 64.18 15 4.76 No 74 -5.76 No 0 0 No -24 0.68 Yes 38 47.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68758991 + NM_133509 RAD51B 0 . . . 0.99 80.82 15 4.58 No 2 1.01 Yes 0 0 No -42 0.66 No 41 84.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68762314 + NM_133509 RAD51B 0 . . . 4.69 80.39 23 4.8 No 51 1 Yes 0 0 No -22 0.81 Yes 44 82.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59807254 - NM_032043 BRIP1 0 . . . 2.71 75.3 13 6.08 Yes 58 0.93 Yes 0 0 No -31 0.63 No 43 72.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68492001 + NM_133509 RAD51B 0 . . . 6.27 87.06 31 5.03 No 58 0.27 No 0 0 No -20 0.53 No 44 72.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41215726 - NM_007294 BRCA1 0 . . . 5.27 82.56 24 5 No 21 1.32 Yes 0 0 No -23 0.9 Yes 37 78.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68863494 + NM_004360 CDH1 0 . . . 0.21 57.06 18 4.81 No 66 -5.24 No 0 0 No -28 0.64 No 45 38.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68440535 + NM_133509 RAD51B 0 . . . 3.13 60.59 17 4.69 No 49 -5.31 No 0 0 No -19 0.48 No 39 56.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190696766 + NM_000534 PMS1 0 . . . 0.96 72.24 26 5 No 69 1.72 Yes 0 0 No -25 0.77 Yes 37 59.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41007917 + NM_001164269 RAD51 0 . . . 3.62 80.41 49 7.68 Yes 26 0.79 Yes 0 0 No -48 0.9 Yes 37 78.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69015689 + NM_133509 RAD51B 0 . . . 1.01 73.38 22 4.79 No 35 0.63 No 0 0 No -21 0.83 Yes 34 81.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69008485 + NM_133509 RAD51B 0 . . . 5.83 82.09 35 6.25 Yes 76 0.42 No 0 0 No -34 0.71 Yes 49 64.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69083009 + NM_133509 RAD51B 0 . . . 8.04 80.03 25 5.38 No 0 1.26 Yes 0 0 No -22 0.45 No 52 66.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56777428 + NM_058216 RAD51C 0 . . . 0.3 72.89 20 6.08 Yes 33 1.16 Yes 0 0 No -23 0.9 Yes 25 32.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84382559 - NM_139076 FAM175A 0 . . . 1.78 69.39 20 4.58 No 66 0.96 Yes 0 0 No -19 0.86 Yes 54 36.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68717394 + NM_133509 RAD51B 0 . . . 6.98 77.76 30 5.64 Yes 48 0.21 No 0 0 No -29 0.92 Yes 43 67.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69044532 + NM_133509 RAD51B 0 . . . 4.47 67.33 30 6 Yes 72 0.54 No 0 0 No -29 0.91 Yes 47 82.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215593095 - NM_000465 BARD1 0 . . . 0.36 72.74 29 7.68 Yes 54 0.12 No 0 0 No -28 0.92 Yes 47 30.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68780602 + NM_004360 CDH1 0 . . . 0.32 74.68 24 5.29 No 4 0.1 No 0 0 No -23 0.83 Yes 54 81.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108240798 + NM_000051 ATM 0 . . . 6.42 81.77 16 4.69 No 18 0.85 Yes 0 0 No -22 0.71 Yes 40 68.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68688474 + NM_133509 RAD51B 0 . . . 2.07 66.92 21 5.83 Yes 43 0.24 No 0 0 No -27 0.59 No 45 32.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47656327 + NM_000251 MSH2 0 . . . 5.12 85.02 37 5.97 Yes 6 1.12 Yes 0 0 No -21 0.77 Yes 52 77.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6047754 - NM_000535 PMS2 0 . . . 1.29 74.47 26 5.94 Yes 8 1.73 Yes 0 0 No -29 0.36 No 54 64.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1221488 + NM_000455 STK11 0 . . . 7.27 84.16 52 8.41 Yes 13 0.47 No 0 0 No -37 0.72 Yes 50 62.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47646694 + NM_000251 MSH2 0 . . . 4.58 71.49 45 6.11 Yes 51 1.12 Yes 0 0 No -22 0.43 No 41 89.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68345962 + NM_133509 RAD51B 0 . . . 1.36 75.96 18 5.38 No 3 0.92 Yes 0 0 No -23 0.61 No 23 42.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108171654 + NM_000051 ATM 0 . . . 4.87 84.17 17 4.58 No 50 1.54 Yes 0 0 No -17 0.77 Yes 12 92.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68389510 + NM_133509 RAD51B 0 . . . 1.55 66.46 37 5.99 Yes 16 0.76 No 0 0 No -22 0.45 No 42 82.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108139889 + NM_000051 ATM 0 . . . 0.51 64.8 30 6.63 Yes 27 0.91 Yes 0 0 No -32 0.51 No 47 67.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37049079 + NM_000249 MLH1 0 . . . 0.47 60.97 20 4.23 No 23 0.73 No 0 0 No -27 0.55 No 35 93.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68402294 + NM_133509 RAD51B 0 . . . 4.78 82.27 47 5.63 Yes 35 0.75 No 0 0 No -24 0.33 No 23 89.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68598819 + NM_133509 RAD51B 0 . . . 1.22 69.96 18 5.39 No 15 0.57 No 0 0 No -22 0.62 No 43 83.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47657419 + NM_000251 MSH2 0 . . . 5.04 81.05 48 6.52 Yes 47 1.27 Yes 0 0 No -32 0.62 No 11 67.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68826542 + NM_004360 CDH1 0 . . . 3.92 80.59 33 4.62 No 66 1.34 Yes 0 0 No -36 0.45 No 16 44.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108177759 + NM_000051 ATM 0 . . . 3.42 71.13 13 4.64 No 46 1 Yes 0 0 No -16 0.59 No 38 44.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89719915 + NM_000314 PTEN 0 . . . 4 80.82 26 6.14 Yes 67 -6.04 No 0 0 No -25 0.92 Yes 45 53.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190683391 + NM_000534 PMS1 0 . . . 1.84 77.23 34 4.29 No -1 -2.09 No 0 0 No -33 0.58 No 43 85.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190663674 + NM_000534 PMS1 0 . . . 5.96 79.23 62 4.89 No 51 -1.37 No 0 0 No -31 0.56 No 49 77.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69058888 + NM_133509 RAD51B 0 . . . 3 0 44 7.91 Yes 9 1.28 Yes 0 0 No -26 0.4 No 49 42.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69144009 + NM_133509 RAD51B 0 . . . 1.61 79.96 27 5.28 No 56 -3.67 No 0 0 No -19 0.76 Yes 42 46.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47699209 + NM_000251 MSH2 0 . . . 1.62 56.63 36 5.96 Yes 38 -3 No 0 0 No -35 0.54 No 41 73.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68803129 + NM_004360 CDH1 0 . . . 3.26 73.09 9 3.87 No -1 0.4 No 0 0 No -33 0.46 No 46 88.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68409423 + NM_133509 RAD51B 0 . . . 5.25 71.08 17 4 No 65 -5.32 No 0 0 No -20 0.57 No 44 56.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59920731 - NM_032043 BRIP1 0 . . . 0.2 67.04 27 5.08 No 15 0.59 No 0 0 No -24 0.83 Yes 35 97.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47638904 + NM_000251 MSH2 0 . . . 3.9 73.25 34 5.2 No 67 -1.76 No 0 0 No -33 0.53 No 45 59.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68728050 + NM_133509 RAD51B 0 . . . 2.37 77.01 19 4.99 No 3 0.85 Yes 0 0 No -51 0.59 No 24 67.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47775257 + NM_000251 MSH2 0 . . . 2.1 55.38 32 6.16 Yes 1 0.6 No 0 0 No -28 0.66 No 30 64.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68811635 + NM_133509 RAD51B 0 . . . 1.78 76.63 20 5.57 Yes 58 -3.88 No 0 0 No -19 0.48 No 43 68.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68926625 + NM_133509 RAD51B 0 . . . 0.12 55.56 25 5.57 Yes 7 0.95 Yes 0 0 No -24 0.83 Yes 39 71.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21967933 - NM_000077 CDKN2A 0 . . . 0.93 64.31 31 4.47 No -2 0.98 Yes 0 0 No -29 0.64 No 60 57.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68362851 + NM_133509 RAD51B 0 . . . 1.78 66.51 22 6.98 Yes 69 0.92 Yes 0 0 No -21 0.41 No 49 52.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89678998 + NM_000314 PTEN 0 . . . 0.11 65.97 36 6.65 Yes 60 -2.48 No 0 0 No -35 0.55 No 46 67.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84405383 - NM_139076 FAM175A 0 . . . 0.1 55.86 31 5.66 Yes 47 0.51 No 0 0 No -30 0.9 Yes 11 25.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68780585 + NM_133509 RAD51B 0 . . . 3.92 89.71 18 5.74 Yes 15 0.63 No 0 0 No -17 0.31 No 48 71.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41007123 + NM_001164269 RAD51 0 . . . 3.28 80.38 34 6.54 Yes 4 0.1 No 0 0 No -25 0.44 No 54 85.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47800461 + NM_000251 MSH2 0 . . . 1.29 75.24 19 6.16 Yes 10 0.09 No 0 0 No -18 0.53 No 48 49.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75494706 - NM_001040108 MLH3 0 . . . 0.26 69.71 31 4.75 No 36 0.14 No 0 0 No -31 0.59 No 24 60.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59764500 - NM_032043 BRIP1 0 . . . 1.71 83.65 15 5.71 Yes 76 0.95 Yes 0 0 No -28 0.3 No 50 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47728251 + NM_000251 MSH2 0 . . . 3.22 83.28 9 4.63 No 63 -1.46 No 0 0 No -22 0.64 No 44 77.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47759092 + NM_000251 MSH2 0 . . . 1.98 69.17 69 11.66 Yes 72 0.63 No 0 0 No -22 0.86 Yes 55 70.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68616627 + NM_133509 RAD51B 0 . . . 5.51 74.48 34 6.62 Yes 54 0.64 No 0 0 No -33 0.62 No 45 80.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23636696 - NM_024675 PALB2 0 . . . 0.67 0 20 4.52 No 62 0.51 No 0 0 No -23 0.5 No 38 31.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68852085 + NM_133509 RAD51B 0 . . . 6.32 74 43 7.81 Yes 45 0.49 No 0 0 No -42 0.77 Yes 48 82.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89622918 + NM_000314 PTEN 0 . . . 1.92 73.34 18 3.55 No 62 1.16 Yes 0 0 No -22 0.94 Yes 45 86.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68796375 + NM_133509 RAD51B 0 . . . 0.94 67.02 18 4.62 No 43 0.25 No 0 0 No -44 0.29 No 53 34.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68840851 + NM_133509 RAD51B 0 . . . 2.28 68.56 22 4.69 No 71 0.58 No 0 0 No -19 0.87 Yes 35 54.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75515199 - NM_001040108 MLH3 0 . . . 0.59 69.97 32 6.08 Yes 25 0.62 No 0 0 No -21 0.49 No 15 28.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29125192 - NM_001005735 CHEK2 0 . . . 6.17 66.55 47 7.55 Yes 15 1.12 Yes 0 0 No -26 0.54 No 36 77.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68814697 + NM_004360 CDH1 0 . . . 0.38 76.16 17 5.92 Yes 29 0.42 No 0 0 No -31 0.44 No 20 61.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68674577 + NM_133509 RAD51B 0 . . . 1.35 83.95 16 4.69 No 9 0.23 No 0 0 No -23 0.47 No 49 98.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68755656 + NM_133509 RAD51B 0 . . . 0.68 0 26 5.27 No 64 0.5 No 0 0 No -25 0.5 No 50 57.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37072428 + NM_000249 MLH1 0 . . . 3.54 0 17 4.22 No 25 0.35 No 0 0 No -41 0.91 Yes 49 69.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41213519 - NM_007294 BRCA1 0 . . . 5 82.12 24 5.39 No 0 0.95 Yes 0 0 No -23 0.92 Yes 31 63.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152354706 - NM_005431 XRCC2 0 . . . 0.49 67.35 22 5.27 No -4 0.1 No 0 0 No -26 0.41 No 43 66.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68428165 + NM_133509 RAD51B 0 . . . 8.22 83.25 24 5.28 No 14 0.62 No 0 0 No -24 0.65 No 44 74.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56772898 + NM_058216 RAD51C 0 . . . 0.85 74.47 26 5.03 No 4 0.1 No 0 0 No -25 0.75 Yes 54 82.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59792986 - NM_032043 BRIP1 0 . . . 1.7 61.09 19 4.8 No 66 -3.17 No 0 0 No -18 0.51 No 41 37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68300704 + NM_133509 RAD51B 0 . . . 5.06 82.15 20 6.15 Yes 40 0.74 No 0 0 No -19 0.75 Yes 42 38.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190714089 + NM_000534 PMS1 0 . . . 9.27 92 10 5.2 No 23 1.12 Yes 0 0 No -20 0.44 No 41 78.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47654032 + NM_000251 MSH2 0 . . . 3.53 74.9 47 7.28 Yes 50 0.65 No 0 0 No -41 0.75 Yes 46 70.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90958804 - NM_002485 NBN 0 . . . 0.3 67.86 50 6.9 Yes 51 0.72 No 0 0 No -39 0.44 No 50 86.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68826922 + NM_133509 RAD51B 0 . . . 1.41 0 23 4.8 No 16 0.94 Yes 0 0 No -38 0.6 No 42 68.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29115716 - NM_001005735 CHEK2 0 . . . 0.46 0 29 6.48 Yes 22 0.68 No 0 0 No -23 0.58 No 36 52.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190668782 + NM_000534 PMS1 0 . . . 1.51 64.42 23 4.92 No -1 0.52 No 0 0 No -63 0.19 No 42 31.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89696486 + NM_000314 PTEN 0 . . . 7.36 88.02 20 5.11 No 6 1.55 Yes 0 0 No -25 0.71 Yes 36 55.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37092654 + NM_000249 MLH1 0 . . . 1.47 84.22 17 5.86 Yes 33 1.08 Yes 0 0 No -28 0.44 No 51 38.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68483676 + NM_133509 RAD51B 0 . . . 4.32 77.52 35 6.07 Yes -2 0.04 No 0 0 No -34 0.54 No 52 56.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131906917 + NM_005732 RAD50 0 . . . 1.03 62.4 26 5.12 No 69 -5.52 No 0 0 No -26 0.56 No 53 20.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47708969 + NM_000251 MSH2 0 . . . 4.86 83.06 27 5.57 Yes -3 -1.92 No 0 0 No -26 0.86 Yes 37 50.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6039515 - NM_000535 PMS2 0 . . . 1.75 71.61 27 5.39 No 32 0.79 Yes 0 0 No -26 0.83 Yes 22 71.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68862875 + NM_004360 CDH1 0 . . . 0.99 0 30 5.71 Yes 74 -3.58 No 0 0 No -29 0.62 No 41 70.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68577604 + NM_133509 RAD51B 0 . . . 6.76 72.58 27 5.96 Yes 12 1.5 Yes 0 0 No -31 0.5 No 46 71.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68295387 + NM_133509 RAD51B 0 . . . 0.97 76.86 31 6.44 Yes 17 0.73 No 0 0 No -30 0.59 No 45 59.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68870243 + NM_133509 RAD51B 0 . . . 1.92 69.38 14 4.79 No 5 0.51 No 0 0 No -20 0.64 No 53 43.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68827987 + NM_133509 RAD51B 0 . . . 0.59 62.42 26 5 No 59 -3.35 No 0 0 No -25 0.74 Yes 29 62.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215644067 - NM_000465 BARD1 0 . . . 4.81 78.68 24 4.35 No 36 -4 No 0 0 No -24 0.73 Yes 49 80.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37046404 + NM_000249 MLH1 0 . . . 3.39 68.33 14 5.35 No 74 0.95 Yes 0 0 No -22 0.36 No 27 34.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68796842 + NM_133509 RAD51B 0 . . . 0.24 74.02 20 5.57 Yes 73 -6.46 No 0 0 No -19 0.71 Yes 48 36.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37035054 + NM_000249 MLH1 0 . . . 5.85 83.04 14 5 No 56 0.65 No 0 0 No -29 0.52 No 26 48.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68673273 + NM_133509 RAD51B 0 . . . 5.17 79.54 21 8.41 Yes 38 0.69 No 0 0 No -20 0.65 No 20 43.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108200456 + NM_000051 ATM 0 . . . 5.35 73.54 32 7.06 Yes 73 0.49 No 0 0 No -31 0.58 No 34 82.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68893839 + NM_133509 RAD51B 0 . . . 0.5 0 21 6.56 Yes 70 -3.72 No 0 0 No -20 0.54 No 52 51.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68724582 + NM_133509 RAD51B 0 . . . 2.51 69.95 16 4.69 No 10 1.52 Yes 0 0 No -31 0.49 No 36 56.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108139154 + NM_000051 ATM 0 . . . 4.05 74.97 39 7.35 Yes -3 1.12 Yes 0 0 No -38 0.68 Yes 31 81.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69091860 + NM_133509 RAD51B 0 . . . 4.53 71.16 34 5.69 Yes 2 1.07 Yes 0 0 No -23 0.58 No 50 74.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41241337 - NM_007294 BRCA1 0 . . . 2.66 84.41 16 6.01 Yes 3 1.26 Yes 0 0 No -28 0.69 Yes 40 37.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69084025 + NM_133509 RAD51B 0 . . . 9.2 91.42 22 4.96 No 6 1.88 Yes 0 0 No -25 0.87 Yes 52 76.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59830818 - NM_032043 BRIP1 0 . . . 3.64 77.05 23 4.08 No 2 1.84 Yes 0 0 No -28 0.49 No 38 60.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59761328 - NM_032043 BRIP1 0 . . . 0.78 70.89 14 5.59 Yes 51 0.56 No 0 0 No -36 0.39 No 55 26.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59836434 - NM_032043 BRIP1 0 . . . 2.42 0 21 4.99 No 64 1 Yes 0 0 No -21 0.63 No 49 34.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190652341 + NM_000534 PMS1 0 . . . 9.84 85.81 16 4.79 No 14 1.65 Yes 0 0 No -24 0.93 Yes 44 78.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47770995 + NM_000251 MSH2 0 . . . 5.66 78.02 21 5.2 No 26 0.42 No 0 0 No -54 0.89 Yes 40 68.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32965937 + NM_000059 BRCA2 0 . . . 4.14 72.2 28 5.48 No 1 0.71 No 0 0 No -28 0.61 No 43 65.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69078489 + NM_133509 RAD51B 0 . . . 0.23 0 15 5.73 Yes 57 0.99 Yes 0 0 No -26 0.79 Yes 25 32.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59924465 - NM_032043 BRIP1 0 . . . 7.59 87.8 27 8.9 Yes 27 0.71 No 0 0 No -26 0.94 Yes 44 66.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68863122 + NM_004360 CDH1 0 . . . 0.55 69.72 21 9.76 Yes 23 0.98 Yes 0 0 No -20 0.39 No 35 86.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69023533 + NM_133509 RAD51B 0 . . . 3.92 68.3 19 5.73 Yes 5 0.61 No 0 0 No -18 0.51 No 40 64.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69146280 + NM_133509 RAD51B 0 . . . 4.34 66.19 39 5.75 Yes 41 1.79 Yes 0 0 No -27 0.74 Yes 52 61.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89710098 + NM_000314 PTEN 0 . . . 3.45 79.99 18 5.09 No 70 -5.1 No 0 0 No -24 0.61 No 40 57.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215656359 - NM_000465 BARD1 0 . . . 7.14 80.01 24 4.91 No 13 1.36 Yes 0 0 No -29 0.27 No 45 93.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47655017 + NM_000251 MSH2 0 . . . 1.76 68.02 21 5.1 No 57 -4.41 No 0 0 No -19 0.57 No 49 76.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89641528 + NM_000314 PTEN 0 . . . 1.46 67.5 93 8.11 Yes 49 0.31 No 0 0 No -43 0.46 No 39 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68633448 + NM_133509 RAD51B 0 . . . 7.63 84.65 16 5.48 No -4 0.72 No 0 0 No -23 0.33 No 48 90.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190658802 + NM_000534 PMS1 0 . . . 3.9 74.41 21 5.2 No 7 1.13 Yes 0 0 No -59 0.39 No 51 42.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190736057 + NM_000534 PMS1 0 . . . 2.82 59.26 29 4.51 No 40 -3.76 No 0 0 No -28 0.78 Yes 44 90.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90972160 - NM_002485 NBN 0 . . . 0.38 69.94 19 5.51 No 0 0.57 No 0 0 No -24 0.52 No 51 38.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47686698 + NM_000251 MSH2 0 . . . 3.44 79.58 28 6.4 Yes 18 0.85 Yes 0 0 No -27 0.76 Yes 53 49.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47660686 + NM_000251 MSH2 0 . . . 5.17 81.06 24 5.48 No 53 2.23 Yes 0 0 No -23 0.41 No 58 56.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6015863 - NM_000535 PMS2 0 . . . 2.79 79.55 25 5.57 Yes 18 0.31 No 0 0 No -24 0.62 No 40 48.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89645456 + NM_000314 PTEN 0 . . . 2.02 70.2 23 4.67 No 73 0.62 No 0 0 No -21 0.53 No 42 66.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68991626 + NM_133509 RAD51B 0 . . . 1.02 72.43 32 5.9 Yes 25 -2.32 No 0 0 No -22 0.46 No 44 24.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68916594 + NM_133509 RAD51B 0 . . . 0.63 69.74 12 5.74 Yes 16 1.39 Yes 0 0 No -26 0.49 No 42 67.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56774474 + NM_058216 RAD51C 0 . . . 6.23 80.93 16 4.69 No 36 1.5 Yes 0 0 No -36 0.88 Yes 46 62.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94150111 - NM_005591 MRE11 0 . . . 2.03 71.45 21 5.88 Yes 17 0.45 No 0 0 No -25 0.72 Yes 41 80.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108199696 + NM_000051 ATM 0 . . . 1.04 0 17 4.99 No -3 0.73 No 0 0 No -51 0.55 No 51 67.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7567325 - NM_000546 TP53 0 . . . 0.92 74.78 17 4.8 No 76 0.42 No 0 0 No -27 0.57 No 54 79.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23629784 - NM_024675 PALB2 0 . . . 5.07 66.99 19 4.69 No 13 0.59 No 0 0 No -18 0.7 Yes 45 92.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48019312 + NM_000179 MSH6 0 . . . 2.24 80.12 45 6.46 Yes 7 1.02 Yes 0 0 No -38 0.63 No 51 87.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59890794 - NM_032043 BRIP1 0 . . . 0.26 74.98 32 5.57 Yes 74 -6.57 No 0 0 No -31 0.43 No 54 53.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68931496 + NM_133509 RAD51B 0 . . . 1.05 79.29 27 6.58 Yes 18 1.48 Yes 0 0 No -31 0.63 No 40 62.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108122861 + NM_000051 ATM 0 . . . 3.41 70.84 13 5.1 No 23 0.16 No 0 0 No -23 0.16 No 50 48.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89693394 + NM_000314 PTEN 0 . . . 0.84 73.68 21 5.69 Yes 31 1.05 Yes 0 0 No -20 0.8 Yes 27 88.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68397957 + NM_133509 RAD51B 0 . . . 3.68 75.51 27 5.64 Yes 69 0.91 Yes 0 0 No -26 0.75 Yes 33 70.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59838871 - NM_032043 BRIP1 0 . . . 3.86 0 28 4.83 No 12 1.55 Yes 0 0 No -27 0.48 No 46 94.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68487089 + NM_133509 RAD51B 0 . . . 1.42 0 27 7.4 Yes 21 0.64 No 0 0 No -26 0.87 Yes 42 85.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59879655 - NM_032043 BRIP1 0 . . . 6.24 86.87 18 6.29 Yes 68 0.85 Yes 0 0 No -23 0.66 No 42 47.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68797657 + NM_004360 CDH1 0 . . . 1.73 68.52 21 8.66 Yes 7 1.66 Yes 0 0 No -20 0.84 Yes 32 88.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47653187 + NM_000251 MSH2 0 . . . 1.63 72.33 21 7.14 Yes 34 1.51 Yes 0 0 No -20 0.8 Yes 24 88.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69026118 + NM_133509 RAD51B 0 . . . 3.21 84.41 47 8.65 Yes 34 0.31 No 0 0 No -18 0.56 No 46 57.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68586171 + NM_133509 RAD51B 0 . . . 1.74 77.08 28 6.23 Yes 22 1.54 Yes 0 0 No -27 0.81 Yes 47 71.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104179002 - NM_001100119 XRCC3 0 . . . 4.35 78.67 21 4.79 No 69 0.46 No 0 0 No -20 0.81 Yes 48 53.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69102070 + NM_133509 RAD51B 0 . . . 3.94 67.18 29 4.45 No 31 0.18 No 0 0 No -22 0.54 No 40 65.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68434640 + NM_133509 RAD51B 0 . . . 4.75 78.67 19 6 Yes 70 -2.18 No 0 0 No -29 0.7 Yes 42 81.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105173704 + NM_021930 RINT1 0 . . . 3.01 69.62 17 4.34 No 1 0.37 No 0 0 No -19 0.41 No 48 65.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190659418 + NM_000534 PMS1 0 . . . 2.25 64.06 29 5.9 Yes 70 1.18 Yes 0 0 No -28 0.54 No 43 45.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47724321 + NM_000251 MSH2 0 . . . 4.46 75.07 16 5.91 Yes 51 0.58 No 0 0 No -21 0.41 No 10 33.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41236029 - NM_007294 BRCA1 0 . . . 1.69 67.51 10 4.14 No 25 -2.28 No 0 0 No -38 0.76 Yes 52 32.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59791852 - NM_032043 BRIP1 0 . . . 2.88 79.43 23 5.39 No 66 -4.84 No 0 0 No -22 0.67 Yes 47 81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56799685 + NM_058216 RAD51C 0 . . . 4.59 72.87 26 5.95 Yes 39 1.84 Yes 0 0 No -32 0.32 No 38 67.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41024161 + NM_001164269 RAD51 0 . . . 5.68 65.65 21 6.92 Yes 50 0.41 No 0 0 No -20 0.61 No 39 63.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108100594 + NM_000051 ATM 0 . . . 8.19 85.05 62 6.76 Yes 9 1.4 Yes 0 0 No -26 0.66 No 49 83.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68451249 + NM_133509 RAD51B 0 . . . 7.34 84.31 30 3.99 No 24 1.64 Yes 0 0 No -24 0.66 No 46 73.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68436836 + NM_133509 RAD51B 0 . . . 7.83 79.32 18 4.69 No 48 0.83 Yes 0 0 No -17 0.63 No 39 73.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47703737 + NM_000251 MSH2 0 . . . 1.48 0 16 6.55 Yes 12 0.36 No 0 0 No -45 0.85 Yes 46 45.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68878995 + NM_133509 RAD51B 0 . . . 6.51 74.86 20 6.44 Yes 17 2.25 Yes 0 0 No -32 0.55 No 41 88.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59912278 - NM_032043 BRIP1 0 . . . 1.92 65.05 29 6.85 Yes 29 0.54 No 0 0 No -28 0.76 Yes 48 55.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6029245 - NM_000535 PMS2 0 . . . 2.29 70.92 28 7.43 Yes 51 0.61 No 0 0 No -27 0.85 Yes 49 66.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59789412 - NM_032043 BRIP1 0 . . . 1.87 70.53 34 5.99 Yes 74 0.32 No 0 0 No -33 0.61 No 47 49.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131933722 + NM_005732 RAD50 0 . . . 9.75 80.54 67 8.83 Yes 7 0.27 No 0 0 No -36 0.83 Yes 51 90.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131943945 + NM_005732 RAD50 0 . . . 0.42 70.21 18 4.23 No 61 0.95 Yes 0 0 No -18 0.8 Yes 60 37.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69151248 + NM_133509 RAD51B 0 . . . 0.86 0 17 4.58 No 40 -0.76 No 0 0 No -28 0.55 No 18 46.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68517585 + NM_133509 RAD51B 0 . . . 3.14 78.09 26 5.24 No 71 -4.35 No 0 0 No -25 0.81 Yes 46 34.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69025457 + NM_133509 RAD51B 0 . . . 4.16 80.37 26 5.66 Yes 67 1 Yes 0 0 No -25 0.87 Yes 47 56.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68723085 + NM_133509 RAD51B 0 . . . 1.96 69.08 28 5.29 No 32 0.29 No 0 0 No -27 0.6 No 26 76.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69020187 + NM_133509 RAD51B 0 . . . 4.09 72.65 23 5.1 No 3 0.39 No 0 0 No -25 0.91 Yes 46 83.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59926005 - NM_032043 BRIP1 0 . . . 2.09 62.86 35 5.35 No 47 0.77 Yes 0 0 No -27 0.8 Yes 29 65.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68692689 + NM_133509 RAD51B 0 . . . 3.02 0 16 5.91 Yes 25 0.29 No 0 0 No -24 0.94 Yes 33 69.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190724623 + NM_000534 PMS1 0 . . . 3.18 77.71 19 4.17 No 41 0.89 Yes 0 0 No -22 0.59 No 17 50.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152353249 - NM_005431 XRCC2 0 . . . 2.45 76.6 25 4.96 No 48 -3.97 No 0 0 No -24 0.57 No 48 71.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89652196 + NM_000314 PTEN 0 . . . 0.59 67.69 15 5.79 Yes 17 1.21 Yes 0 0 No -30 0.44 No 41 91.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32891592 + NM_000059 BRCA2 0 . . . 1.67 60.17 20 5.66 Yes 43 1.39 Yes 0 0 No -29 0.51 No 57 48.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190732262 + NM_000534 PMS1 0 . . . 3.98 77.24 42 5.06 No 62 0.72 No 0 0 No -24 0.62 No 48 92.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105177480 + NM_021930 RINT1 0 . . . 8.59 74.53 23 6.59 Yes 17 1.55 Yes 0 0 No -32 0.51 No 41 91.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47802757 + NM_000251 MSH2 0 . . . 1.81 76.18 22 5.29 No 69 1.29 Yes 0 0 No -21 0.62 No 48 60.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47658442 + NM_000251 MSH2 0 . . . 6.68 67.01 24 4.88 No 74 1.07 Yes 0 0 No -24 0.41 No 35 56.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68824896 + NM_133509 RAD51B 0 . . . 1.44 70.56 31 6.47 Yes 66 -4.52 No 0 0 No -30 0.87 Yes 50 81.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68852457 + NM_133509 RAD51B 0 . . . 0.99 73.47 35 6.24 Yes 59 0.87 Yes 0 0 No -28 0.35 No 22 50.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32939223 + NM_000059 BRCA2 0 . . . 1.1 0 23 5.41 No 35 0.38 No 0 0 No -25 0.7 Yes 41 79.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41242126 - NM_007294 BRCA1 0 . . . 4.88 81.16 35 6.08 Yes 33 -2.2 No 0 0 No -34 0.92 Yes 51 85.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68596703 + NM_133509 RAD51B 0 . . . 5.99 78.99 11 3.23 No 0 1 Yes 0 0 No -15 0.55 No 50 85.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47632431 + NM_000251 MSH2 0 . . . 2.08 69.33 33 5.37 No 46 0.61 No 0 0 No -23 0.4 No 52 33.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89635618 + NM_000314 PTEN 0 . . . 0.69 67.45 29 6.81 Yes -2 0.55 No 0 0 No -28 0.47 No 28 64.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29120973 - NM_001005735 CHEK2 0 . . . 3.18 75.96 13 5.57 Yes 23 -2.39 No 0 0 No -24 0.52 No 39 58.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47698598 + NM_000251 MSH2 0 . . . 8.43 78.55 15 4.35 No 68 -3.42 No 0 0 No -14 0.6 No 48 79.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69133039 + NM_133509 RAD51B 0 . . . 3.56 76.1 37 6.08 Yes 53 1.18 Yes 0 0 No -31 0.59 No 17 86.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1217091 + NM_000455 STK11 0 . . . 8.17 85.67 33 5.03 No 32 0.6 No 0 0 No -32 0.58 No 26 61.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68853172 + NM_133509 RAD51B 0 . . . 3.45 82.05 28 6.48 Yes 22 1.4 Yes 0 0 No -27 0.96 Yes 29 47.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108109710 + NM_000051 ATM 0 . . . 9.7 82.66 15 4.58 No 22 1.01 Yes 0 0 No -46 0.55 No 40 87.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68815683 + NM_133509 RAD51B 0 . . . 8.03 91.14 13 4.36 No 70 1.73 Yes 0 0 No -46 0.42 No 51 77.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68815587 + NM_004360 CDH1 0 . . . 1.12 81.83 32 4.18 No 25 0.41 No 0 0 No -25 0.6 No 46 91.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108224421 + NM_000051 ATM 0 . . . 3.06 74.86 27 5.3 No 14 0.73 No 0 0 No -27 0.86 Yes 44 75.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29132127 - NM_001005735 CHEK2 0 . . . 0.98 66.49 21 6.07 Yes 64 -4.92 No 0 0 No -24 0.59 No 42 34.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29095400 - NM_001005735 CHEK2 0 . . . 3.45 77.69 34 5.91 Yes 57 -3.81 No 0 0 No -33 0.85 Yes 48 86.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68759920 + NM_133509 RAD51B 0 . . . 7.95 82.71 19 4.36 No 34 0.6 No 0 0 No -24 0.67 Yes 38 60.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89658787 + NM_000314 PTEN 0 . . . 2.7 77.58 20 5.09 No 56 0.49 No 0 0 No -19 0.59 No 50 51.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68490787 + NM_133509 RAD51B 0 . . . 2.64 71 16 4.69 No 49 0.73 No 0 0 No -21 0.53 No 44 69.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84380681 - NM_139076 FAM175A 0 . . . 0.95 70.07 32 5.05 No 43 0.05 No 0 0 No -27 0.65 No 45 44.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6021208 - NM_000535 PMS2 0 . . . 0.13 75.23 14 4.9 No -4 0.08 No 0 0 No -22 0.49 No 55 25.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68489891 + NM_133509 RAD51B 0 . . . 1.3 67.39 15 4.82 No 16 0.55 No 0 0 No -21 0.78 Yes 46 78.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37081547 + NM_000249 MLH1 0 . . . 10.17 93.06 18 4.9 No 9 0.81 Yes 0 0 No -17 0.47 No 37 59.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68600168 + NM_133509 RAD51B 0 . . . 0.63 75.42 19 5.2 No 31 -4.22 No 0 0 No -18 0.54 No 49 81.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68714077 + NM_133509 RAD51B 0 . . . 2.19 66.98 20 4.36 No 8 0.07 No 0 0 No -17 0.73 Yes 29 54.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68694063 + NM_133509 RAD51B 0 . . . 3.29 70.88 35 5.83 Yes 49 0.26 No 0 0 No -34 0.84 Yes 37 55.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131956526 + NM_005732 RAD50 0 . . . 3.46 80.8 9 3.87 No 73 1.03 Yes 0 0 No -59 0.71 Yes 35 95.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37061089 + NM_000249 MLH1 0 . . . 5.01 79.64 19 5 No 73 1.51 Yes 0 0 No -24 0.53 No 23 66.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59935136 - NM_032043 BRIP1 0 . . . 0.97 0 22 4.66 No 69 -3.62 No 0 0 No -21 0.94 Yes 45 85.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215655748 - NM_000465 BARD1 0 . . . 1.8 69.89 38 7.41 Yes 29 0.75 No 0 0 No -38 0.55 No 50 75.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56808227 + NM_058216 RAD51C 0 . . . 4.14 82.92 31 6.4 Yes 54 0.27 No 0 0 No -30 0.78 Yes 46 50.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69129150 + NM_133509 RAD51B 0 . . . 0.84 66.85 24 5.48 No 23 1.36 Yes 0 0 No -23 0.38 No 24 71.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69139094 + NM_133509 RAD51B 0 . . . 1.92 70.54 20 8.04 Yes 19 0.83 Yes 0 0 No -19 0.86 Yes 39 83.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29095782 - NM_001005735 CHEK2 0 . . . 5.99 79.93 43 6.47 Yes 7 0.91 Yes 0 0 No -26 0.58 No 51 80.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68372502 + NM_133509 RAD51B 0 . . . 0.57 65.26 33 5.83 Yes 29 1.09 Yes 0 0 No -29 0.66 No 39 55.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32890424 + NM_000059 BRCA2 0 . . . 5.78 80.86 15 4.34 No 8 0.43 No 0 0 No -42 0.61 No 49 70.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89689771 + NM_000314 PTEN 0 . . . 6.22 73.71 19 6.15 Yes 17 0.34 No 0 0 No -18 0.67 Yes 41 45.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215646946 - NM_000465 BARD1 0 . . . 2.67 68.75 18 4.34 No 70 1.17 Yes 0 0 No -21 0.39 No 46 94.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68836825 + NM_004360 CDH1 0 . . . 5.79 71.62 23 2.75 No 35 0.71 No 0 0 No -22 0.56 No 29 48.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37061975 + NM_000249 MLH1 0 . . . 4.12 84.46 16 4.69 No 6 -0.61 No 0 0 No -47 0.68 Yes 43 68.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68382588 + NM_133509 RAD51B 0 . . . 4.33 0 16 4.69 No 18 1.31 Yes 0 0 No -44 0.66 No 40 73.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108160924 + NM_000051 ATM 0 . . . 0.32 73.78 22 4.47 No 13 -2.82 No 0 0 No -21 0.81 Yes 46 82.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68842831 + NM_004360 CDH1 0 . . . 6.65 77.15 21 5.74 Yes 32 1.13 Yes 0 0 No -29 0.55 No 50 50.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68497123 + NM_133509 RAD51B 0 . . . 5.29 78.07 43 7.15 Yes 37 0.82 Yes 0 0 No -29 0.75 Yes 29 55.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90948436 - NM_002485 NBN 0 . . . 0.26 74.23 28 4.96 No 36 -2.59 No 0 0 No -27 0.53 No 52 56.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215663915 - NM_000465 BARD1 0 . . . 1.17 0 25 5.39 No 42 1.29 Yes 0 0 No -24 0.9 Yes 41 78.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68579232 + NM_133509 RAD51B 0 . . . 6.37 85.58 60 8.09 Yes 1 1.15 Yes 0 0 No -31 0.65 No 48 49.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40991551 + NM_001164269 RAD51 0 . . . 2 80.34 27 6.24 Yes 32 0.99 Yes 0 0 No -26 0.9 Yes 21 48.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32970476 + NM_000059 BRCA2 0 . . . 4.78 80.75 20 5 No 21 0.35 No 0 0 No -19 0.58 No 46 68.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68847714 + NM_133509 RAD51B 0 . . . 0.74 68.87 20 4.9 No -3 0.01 No 0 0 No -19 0.58 No 36 74.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89626607 + NM_000314 PTEN 0 . . . 4.45 76.66 22 5.2 No 3 1.29 Yes 0 0 No -47 0.82 Yes 52 67.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59851905 - NM_032043 BRIP1 0 . . . 3.7 75.37 21 4.53 No 62 0.78 Yes 0 0 No -20 0.45 No 11 94.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68734726 + NM_133509 RAD51B 0 . . . 3.2 73.44 22 4.98 No 2 0.42 No 0 0 No -20 0.79 Yes 45 75.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90943855 - NM_002485 NBN 0 . . . 1.35 74.55 24 4.61 No 74 1.11 Yes 0 0 No -46 0.92 Yes 13 82.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69089848 + NM_133509 RAD51B 0 . . . 2.17 70.7 24 5.1 No 22 -2.49 No 0 0 No -28 0.75 Yes 15 44.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68335109 + NM_133509 RAD51B 0 . . . 1.33 64.09 12 3.84 No 33 0.63 No 0 0 No -15 0.24 No 31 38.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105171750 + NM_021930 RINT1 0 . . . 3.25 80.12 19 5.39 No 8 1.2 Yes 0 0 No -19 0.31 No 50 87.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68911194 + NM_133509 RAD51B 0 . . . 4.83 76.82 22 5.09 No 28 0.36 No 0 0 No -21 0.81 Yes 30 75.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6018360 - NM_000535 PMS2 0 . . . 5.35 87.42 15 5.1 No 26 0.05 No 21 0.39 Yes -23 0.28 No 48 73.26 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 68597946 + NM_133509 RAD51B 0 . . . 1.11 63.25 22 5.81 Yes 31 -2.67 No 0 0 No -21 0.6 No 49 51.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152367662 - NM_005431 XRCC2 0 . . . 5.06 74.63 23 4.8 No 73 -4.37 No 0 0 No -22 0.53 No 47 60.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047080 + NM_000249 MLH1 0 . . . 3.28 66.68 19 4.8 No 20 0.7 No 0 0 No -18 0.66 Yes 43 71.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68453296 + NM_133509 RAD51B 0 . . . 3.49 67.45 21 4.79 No 61 1.7 Yes 0 0 No -20 0.74 Yes 43 55.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41222618 - NM_007294 BRCA1 0 . . . 0.06 81.84 21 4.89 No 0 -1.81 No 0 0 No -20 0.9 Yes 52 35.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68751844 + NM_133509 RAD51B 0 . . . 0.31 70.73 20 5.57 Yes 76 1.64 Yes 0 0 No -26 0.64 No 51 56.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68961308 + NM_133509 RAD51B 0 . . . 4.18 74.33 30 8.39 Yes 43 0.95 Yes 0 0 No -29 0.72 Yes 45 82.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69001305 + NM_133509 RAD51B 0 . . . 1.02 75.26 17 4.78 No 36 -3.66 No 0 0 No -52 0.76 Yes 28 37.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131962446 + NM_005732 RAD50 0 . . . 6.63 82.21 30 5.22 No 2 1.78 Yes 0 0 No -50 0.46 No 43 58.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68911000 + NM_133509 RAD51B 0 . . . 2.78 81.16 25 5.39 No 12 0.1 No 0 0 No -24 0.95 Yes 46 78.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131920240 + NM_005732 RAD50 0 . . . 1.74 71.57 28 6.65 Yes 63 1.32 Yes 0 0 No -27 0.94 Yes 51 62.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52434865 - NM_004656 BAP1 0 . . . 2.17 64.71 9 5.91 Yes 60 -4.89 No 0 0 No -30 0.76 Yes 55 41.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7584700 - NM_000546 TP53 0 . . . 1.72 80.22 40 6.63 Yes 58 -4.77 No 0 0 No -39 0.68 Yes 43 78.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41252177 - NM_007294 BRCA1 0 . . . 7.18 84.26 32 4.09 No 9 0.11 No 0 0 No -27 0.74 Yes 46 50.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68412681 + NM_133509 RAD51B 0 . . . 0.71 73.02 42 8.12 Yes 36 -3.43 No 0 0 No -41 0.85 Yes 51 51.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131910732 + NM_005732 RAD50 0 . . . 4.33 77.41 31 6.47 Yes 17 1.44 Yes 0 0 No -30 0.64 No 41 81.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108225969 + NM_000051 ATM 0 . . . 1.08 0 14 4.98 No 35 -1.68 No 0 0 No -21 0.7 Yes 41 90.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190723616 + NM_000534 PMS1 0 . . . 4.99 87.61 25 7.16 Yes 7 1.13 Yes 0 0 No -24 0.66 Yes 46 82.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68712755 + NM_133509 RAD51B 0 . . . 3.46 72.49 29 5.57 Yes 56 -2.79 No 0 0 No -28 0.43 No 49 36.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37048053 + NM_000249 MLH1 0 . . . 0.32 74.68 19 5.18 No 4 0.1 No 0 0 No -18 0.59 No 54 83.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59942112 - NM_032043 BRIP1 0 . . . 8.31 82.15 29 5.57 Yes 19 0.4 No 0 0 No -24 0.56 No 39 71.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94221950 - NM_005591 MRE11 0 . . . 9.09 81.42 16 4.95 No 24 1.88 Yes 0 0 No -24 0.81 Yes 34 72.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69059083 + NM_133509 RAD51B 0 . . . 0.81 73.79 20 4.97 No 55 -5.04 No 0 0 No -24 0.66 No 54 42.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59836461 - NM_032043 BRIP1 0 . . . 6.12 82.69 20 6.32 Yes 37 1.01 Yes 0 0 No -19 0.72 Yes 48 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215604548 - NM_000465 BARD1 0 . . . 0.53 60.79 19 4.44 No 76 1.13 Yes 0 0 No -41 0.82 Yes 44 39.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68779983 + NM_004360 CDH1 0 . . . 3.45 68.34 49 6.96 Yes 23 1.58 Yes 0 0 No -36 0.86 Yes 35 61.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215635134 - NM_000465 BARD1 0 . . . 5.76 75.77 22 6.04 Yes 11 1.16 Yes 0 0 No -25 0.78 Yes 37 70.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29112987 - NM_001005735 CHEK2 0 . . . 3.93 59.43 40 7.81 Yes 24 0.36 No 0 0 No -40 0.63 No 34 73.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32934591 + NM_000059 BRCA2 0 . . . 5.27 86.2 35 5.37 No 73 1.62 Yes 0 0 No -34 0.66 No 49 95.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68940743 + NM_133509 RAD51B 0 . . . 1.37 73.76 21 5.09 No 39 0.99 Yes 0 0 No -20 0.65 No 50 56.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75492473 - NM_001040108 MLH3 0 . . . 6.64 80.56 28 5.83 Yes 56 -5.19 No 0 0 No -27 0.65 No 49 55.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47711168 + NM_000251 MSH2 0 . . . 2.05 0 41 6.42 Yes 7 0.78 Yes 0 0 No -28 0.42 No 42 77.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68816850 + NM_004360 CDH1 0 . . . 2.39 54.58 30 5.21 No 41 -3.86 No 0 0 No -29 0.89 Yes 43 33.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59919910 - NM_032043 BRIP1 0 . . . 1.42 73.59 15 4.05 No 49 1.75 Yes 0 0 No -18 0.58 No 46 58.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6013263 - NM_000535 PMS2 0 . . . 3.57 78.09 15 5.18 No -1 0.16 No 0 0 No -22 0.69 Yes 52 84.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190685378 + NM_000534 PMS1 0 . . . 4.7 77.95 20 5.1 No 10 0.61 No 0 0 No -19 0.56 No 48 64.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68392533 + NM_133509 RAD51B 0 . . . 6.85 81.68 13 5.44 No 6 -0.4 No 0 0 No -25 0.36 No 45 41.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015921 + NM_000179 MSH6 0 . . . 1.12 75.18 16 6.32 Yes 35 1.08 Yes 0 0 No -30 0.58 No 23 85.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68482803 + NM_133509 RAD51B 0 . . . 1.22 71.68 24 6.34 Yes 51 1 Yes 0 0 No -35 0.74 Yes 11 52.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84386305 - NM_139076 FAM175A 0 . . . 1.57 74.7 20 5.1 No 70 1.83 Yes 0 0 No -27 0.82 Yes 49 54.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37058319 + NM_000249 MLH1 0 . . . 8.36 84.25 28 4.69 No 23 0.32 No 0 0 No -21 0.48 No 35 97.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90954719 - NM_002485 NBN 0 . . . 5.54 76.01 12 5.24 No 48 1.06 Yes 0 0 No -33 0.66 No 35 57.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89732854 + NM_000314 PTEN 0 . . . 1.34 73.98 31 5.32 No 35 1.1 Yes 0 0 No -24 0.45 No 23 80.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68993635 + NM_133509 RAD51B 0 . . . 0.03 76.68 19 5.83 Yes 57 -2.23 No 0 0 No -27 0.79 Yes 63 39.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59827191 - NM_032043 BRIP1 0 . . . 1.82 60.09 39 8.66 Yes 8 0.06 No 0 0 No -38 0.85 Yes 50 68.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47681132 + NM_000251 MSH2 0 . . . 1.64 72.36 19 6.7 Yes -1 0.41 No 0 0 No -18 0.39 No 46 72.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131954043 + NM_005732 RAD50 0 . . . 1.73 66.29 29 7.06 Yes -1 0.59 No 0 0 No -28 0.93 Yes 44 42.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59915454 - NM_032043 BRIP1 0 . . . 6.94 81.96 17 4.12 No 7 0.85 Yes 0 0 No -29 0.51 No 44 91.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68798744 + NM_004360 CDH1 0 . . . 0.34 0 14 4.78 No 17 1.53 Yes 0 0 No -19 0.36 No 41 80.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105179373 + NM_021930 RINT1 0 . . . 4.86 86.28 18 4.62 No 46 0.96 Yes 0 0 No -23 0.69 Yes 50 63.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1222713 + NM_000455 STK11 0 . . . 6.17 82.86 36 6.32 Yes 30 0.07 No 0 0 No -17 0.42 No 51 57.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47684357 + NM_000251 MSH2 0 . . . 3.98 75.67 31 5.56 Yes 3 1.74 Yes 0 0 No -30 0.68 Yes 41 83.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68353922 + NM_133509 RAD51B 0 . . . 1.09 83.32 18 4.9 No 6 0.19 No 0 0 No -21 0.42 No 52 89.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68313107 + NM_133509 RAD51B 0 . . . 2.86 76.6 27 5.51 No 4 -0.95 No 0 0 No -27 0.79 Yes 42 52.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47676495 + NM_000251 MSH2 0 . . . 2.64 83 27 8.76 Yes 41 1.99 Yes 0 0 No -26 0.74 Yes 35 65.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7591627 - NM_000546 TP53 0 . . . 2.58 0 26 5.66 Yes 68 -4.07 No 0 0 No -25 0.75 Yes 42 51.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68809328 + NM_133509 RAD51B 0 . . . 5.65 79.89 22 5.29 No 71 1.83 Yes 0 0 No -21 0.92 Yes 10 11.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56772462 + NM_058216 RAD51C 0 . . . 4.95 82.67 25 5.48 No 1 0.85 Yes 0 0 No -24 0.75 Yes 51 88.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190735327 + NM_000534 PMS1 0 . . . 1.9 70.86 21 6 Yes 58 1.85 Yes 0 0 No -20 0.69 Yes 37 49.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68285208 + NM_133509 RAD51B 0 . . . 1.5 63.95 10 5.35 No 63 -3.12 No 0 0 No -26 0.51 No 41 37.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68919678 + NM_133509 RAD51B 0 . . . 5.49 79.58 15 5.38 No 10 0.93 Yes 0 0 No -13 0.46 No 48 90.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215645846 - NM_000465 BARD1 0 . . . 6.82 88.18 19 4.52 No 34 0.19 No 0 0 No -22 0.8 Yes 47 88.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59908277 - NM_032043 BRIP1 0 . . . 4.2 71.91 24 5.2 No 53 0.28 No 0 0 No -23 0.92 Yes 47 26.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41273965 - NM_007294 BRCA1 0 . . . 0.31 67.99 27 5.2 No -1 0.02 No 0 0 No -26 0.64 No 55 62.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68306115 + NM_133509 RAD51B 0 . . . 5.71 78.9 24 3.7 No 13 0.71 No 0 0 No -23 0.43 No 45 89.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68529015 + NM_133509 RAD51B 0 . . . 2.93 72.17 23 5.38 No 23 1.34 Yes 0 0 No -26 0.73 Yes 44 47.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68981592 + NM_133509 RAD51B 0 . . . 2.18 72.34 30 5.57 Yes 17 1.24 Yes 0 0 No -29 0.79 Yes 41 95.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32965947 + NM_000059 BRCA2 0 . . . 1.17 0 28 5.01 No 11 0.78 Yes 0 0 No -22 0.35 No 41 63.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47684445 + NM_000251 MSH2 0 . . . 1.04 68.12 22 5.08 No 72 0.71 No 0 0 No -21 0.87 Yes 30 94.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90973538 - NM_002485 NBN 0 . . . 6.86 82.66 14 4.47 No 20 0.88 Yes 0 0 No -30 0.47 No 50 63.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7571141 - NM_000546 TP53 0 . . . 2.67 81.58 10 5.2 No 42 -2.41 No 0 0 No -20 0.49 No 47 39.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68551695 + NM_133509 RAD51B 0 . . . 1.26 76.19 13 5.57 Yes 75 -5.63 No 0 0 No -24 0.71 Yes 52 58.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84398301 - NM_139076 FAM175A 0 . . . 4.08 79.56 32 7.66 Yes 36 0.74 No 0 0 No -31 0.8 Yes 42 72.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68889745 + NM_133509 RAD51B 0 . . . 2.61 88.25 50 6.16 Yes 51 0.73 No 0 0 No -21 0.47 No 51 80.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33446458 - NM_002878 RAD51D 0 . . . 7.43 82.1 24 5.76 Yes NA NA NA 0 0 No -23 0.64 No 49 48.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215598548 - NM_000465 BARD1 0 . . . 3.16 83.4 18 4.9 No 68 -3.19 No 0 0 No -17 0.48 No 53 45.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89710439 + NM_000314 PTEN 0 . . . 1.36 55.55 22 5.07 No 13 0.29 No 0 0 No -21 0.93 Yes 36 40.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131895059 + NM_005732 RAD50 0 . . . 2.23 67.47 21 5.64 Yes 54 0.55 No 0 0 No -26 0.73 Yes 49 42.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47705294 + NM_000251 MSH2 0 . . . 3.93 73.43 15 4.34 No 7 1.2 Yes 0 0 No -17 0.75 Yes 37 50.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68781637 + NM_004360 CDH1 0 . . . 6.64 91.05 29 6.85 Yes 55 1.21 Yes 0 0 No -28 0.62 No 42 84.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6033819 - NM_000535 PMS2 0 . . . 1.91 72.43 34 6.27 Yes 33 0.85 Yes 0 0 No -20 0.42 No 25 44.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56789037 + NM_058216 RAD51C 0 . . . 0.88 72.61 21 3.97 No 38 1.36 Yes 0 0 No -19 0.66 No 20 95.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68493808 + NM_133509 RAD51B 0 . . . 5.99 82.23 33 5.4 No 27 1.27 Yes 0 0 No -22 0.42 No 42 80.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59863919 - NM_032043 BRIP1 0 . . . 2.79 77.44 18 4.56 No 73 -3.04 No 0 0 No -22 0.61 No 47 47.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215636709 - NM_000465 BARD1 0 . . . 2.34 71.19 26 6.34 Yes -1 0.04 No 0 0 No -25 0.71 Yes 48 72.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68349483 + NM_133509 RAD51B 0 . . . 4.02 84.41 23 5.36 No 27 1.12 Yes 0 0 No -25 0.35 No 43 72.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68514850 + NM_133509 RAD51B 0 . . . 0.81 64.79 29 6.04 Yes 74 -4.14 No 0 0 No -28 0.74 Yes 48 75.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68694341 + NM_133509 RAD51B 0 . . . 2.93 77.54 36 7.97 Yes 19 0.89 Yes 0 0 No -27 0.54 No 53 62.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68663559 + NM_133509 RAD51B 0 . . . 3.09 76.08 29 5.35 No 12 -1.09 No 0 0 No -28 0.85 Yes 35 39.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84391068 - NM_139076 FAM175A 0 . . . 2.64 70.8 15 4.58 No 69 0.93 Yes 19 0.83 Yes -33 0.5 No 31 80.31 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr22 29121656 - NM_001005735 CHEK2 0 . . . 3.81 85.17 15 4.36 No 33 1.08 Yes 0 0 No -14 0.28 No 25 81.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41251733 - NM_007294 BRCA1 0 . . . 6.2 80.81 9 3.87 No 36 0.42 No 0 0 No -35 0.74 Yes 46 50.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215597946 - NM_000465 BARD1 0 . . . 5.91 77.02 24 6.97 Yes 60 -4.61 No 0 0 No -23 0.81 Yes 36 31.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90968194 - NM_002485 NBN 0 . . . 6.77 76.6 9 3.87 No 41 1.26 Yes 0 0 No -22 0.67 Yes 30 75.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215626808 - NM_000465 BARD1 0 . . . 4.12 75.96 14 5.06 No 24 0.26 No 0 0 No -21 0.91 Yes 34 61.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68448915 + NM_133509 RAD51B 0 . . . 3.68 70.85 10 4 No 23 1.59 Yes 0 0 No -26 0.62 No 49 67.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90996916 - NM_002485 NBN 0 . . . 0.36 0 25 5 No -1 0.14 No 24 0.51 Yes -24 0.7 Yes 41 28.37 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 69022933 + NM_133509 RAD51B 0 . . . 4.4 72.21 54 8.06 Yes 73 0.76 No 0 0 No -53 0.22 No 46 72.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47783112 + NM_000251 MSH2 0 . . . 6.72 81.98 28 5.38 No 3 0.05 No 0 0 No -27 0.92 Yes 52 91.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68751421 + NM_133509 RAD51B 0 . . . 5.38 0 38 5.19 No 76 -5.03 No 0 0 No -26 0.49 No 53 77.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68607180 + NM_133509 RAD51B 0 . . . 3 70.59 21 5.18 No 62 1.78 Yes 0 0 No -20 0.66 No 46 79.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108139958 + NM_000051 ATM 0 . . . 8.44 76.94 32 5.92 Yes 9 0.9 Yes 0 0 No -31 0.74 Yes 49 90.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108168751 + NM_000051 ATM 0 . . . 4.05 83.07 15 6.24 Yes 7 0.9 Yes 0 0 No -23 0.84 Yes 51 69.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68945902 + NM_133509 RAD51B 0 . . . 2.71 62.24 70 8.52 Yes 43 1.3 Yes 0 0 No -32 0.72 Yes 43 85.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37083540 + NM_000249 MLH1 0 . . . 4.63 67.85 33 4.99 No 1 2.16 Yes 0 0 No -24 0.62 No 48 93.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68558879 + NM_133509 RAD51B 0 . . . 8.72 86.35 26 5.09 No 17 1.15 Yes 0 0 No -25 0.79 Yes 49 85.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68659833 + NM_133509 RAD51B 0 . . . 0.92 0 26 5.66 Yes 6 1.56 Yes 0 0 No -25 0.8 Yes 11 83.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41234699 - NM_007294 BRCA1 0 . . . 1.72 0 31 6.5 Yes 73 -6.32 No 0 0 No -30 0.37 No 44 62.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1221098 + NM_000455 STK11 0 . . . 3.01 0 21 5.1 No 15 -1.67 No 0 0 No -19 0.77 Yes 43 33.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47793970 + NM_000251 MSH2 0 . . . 3.84 70.81 28 5.57 Yes 59 0.08 No 0 0 No -24 0.35 No 48 83.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68639898 + NM_133509 RAD51B 0 . . . 2.23 68.74 29 6.34 Yes 0 0.43 No 0 0 No -26 0.51 No 46 45.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190707928 + NM_000534 PMS1 0 . . . 2.45 80.12 17 5.56 Yes 7 0.99 Yes 0 0 No -24 0.52 No 42 59.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69031030 + NM_133509 RAD51B 0 . . . 8.48 86.29 26 5.39 No 26 0.73 No 0 0 No -20 0.67 Yes 47 64.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69015506 + NM_133509 RAD51B 0 . . . 4.45 83.26 17 5.21 No 12 1.01 Yes 0 0 No -33 0.52 No 43 75.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190653365 + NM_000534 PMS1 0 . . . 0.53 70.39 26 5.1 No 70 1.19 Yes 0 0 No -25 0.62 No 31 39.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215650570 - NM_000465 BARD1 0 . . . 4.33 76.51 10 4 No 56 -4.46 No 0 0 No -21 0.52 No 45 63.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68775253 + NM_004360 CDH1 0 . . . 5.36 75.46 32 6 Yes 32 -2.42 No 0 0 No -24 0.69 Yes 45 54.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32947230 + NM_000059 BRCA2 0 . . . 6.79 74.56 27 5.39 No 15 1.2 Yes 0 0 No -26 0.82 Yes 43 83.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68523129 + NM_133509 RAD51B 0 . . . 2.89 68.34 21 4.37 No 30 1.03 Yes 0 0 No -23 0.31 No 40 77.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89725979 + NM_000314 PTEN 0 . . . 4.52 66.01 25 5.38 No 72 -6.6 No 0 0 No -24 0.53 No 50 32.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59828807 - NM_032043 BRIP1 0 . . . 0.8 0 16 5.36 No 31 0.14 No 0 0 No -24 0.37 No 27 26.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648252 - NM_024675 PALB2 0 . . . 0.05 70.8 19 3.9 No 25 0.27 No 0 0 No -24 0.49 No 47 50.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152371694 - NM_005431 XRCC2 0 . . . 0.21 82.29 22 6.85 Yes 62 -3.35 No 0 0 No -21 0.96 Yes 45 62.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68315864 + NM_133509 RAD51B 0 . . . 0.37 73.21 21 5.2 No 3 0.11 No 0 0 No -26 0.67 Yes 37 53.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94170699 - NM_005591 MRE11 0 . . . 2.84 75.76 49 6.37 Yes 58 -2.17 No 0 0 No -30 0.46 No 49 70.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89699636 + NM_000314 PTEN 0 . . . 2.25 84.5 30 6.82 Yes 14 0.53 No 0 0 No -29 0.51 No 49 60.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37083150 + NM_000249 MLH1 0 . . . 4.11 70.43 22 5.71 Yes 1 0.11 No 0 0 No -21 0.74 Yes 38 63.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59861846 - NM_032043 BRIP1 0 . . . 0.33 76.97 41 5.88 Yes 36 0.19 No 0 0 No -40 0.67 Yes 34 59.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59866209 - NM_032043 BRIP1 0 . . . 5.61 72.76 26 6.11 Yes 13 0.83 Yes 0 0 No -25 0.65 No 40 67.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215639721 - NM_000465 BARD1 0 . . . 0.73 73.72 55 6.95 Yes 6 0.06 No 0 0 No -38 0.87 Yes 51 65.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215590105 - NM_000465 BARD1 0 . . . 1.94 65.61 18 4.84 No 28 1.41 Yes 0 0 No -22 0.63 No 15 37.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59765741 - NM_032043 BRIP1 0 . . . 1.4 82.58 22 5.46 No 76 1.48 Yes 0 0 No -22 0.42 No 50 63.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94161601 - NM_005591 MRE11 0 . . . 11.33 90.01 46 5.48 No 37 -1.92 No 0 0 No -24 0.69 Yes 41 77.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68323244 + NM_133509 RAD51B 0 . . . 1.93 77.05 23 5.79 Yes 67 0.78 Yes 0 0 No -22 0.59 No 46 83.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68517634 + NM_133509 RAD51B 0 . . . 0.34 67.16 11 4 No 8 -2.29 No 0 0 No -24 0.76 Yes 29 67.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108171495 + NM_000051 ATM 0 . . . 0.36 66.5 22 5.29 No -3 0.29 No 0 0 No -21 0.74 Yes 49 77.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68639716 + NM_133509 RAD51B 0 . . . 3.83 72.93 24 5.09 No -3 0.16 No 0 0 No -23 0.42 No 46 53.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41230585 - NM_007294 BRCA1 0 . . . 2.87 74.31 28 5.48 No 49 0.79 Yes 0 0 No -27 0.72 Yes 44 44.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6036440 - NM_000535 PMS2 0 . . . 3.65 81.71 38 5.27 No 75 -3.36 No 0 0 No -23 0.87 Yes 51 80.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131968712 + NM_005732 RAD50 0 . . . 0.17 0 51 6.85 Yes 64 1.18 Yes 0 0 No -50 0.52 No 27 57.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68565267 + NM_133509 RAD51B 0 . . . 1.82 82.06 28 5.21 No 66 -4.73 No 0 0 No -22 0.47 No 48 34.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21994816 - NM_000077 CDKN2A 0 . . . 4.42 80.36 15 4.62 No 54 -4.56 No 0 0 No -24 0.35 No 50 72.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68782540 + NM_004360 CDH1 0 . . . 2.58 65.45 36 5.57 Yes 35 1.2 Yes 0 0 No -35 0.66 No 23 67.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23638385 - NM_024675 PALB2 0 . . . 0.23 79.55 53 6.63 Yes 20 0.35 No 0 0 No -21 0.36 No 38 63.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75505866 - NM_001040108 MLH3 0 . . . 7.01 81.17 19 5.08 No 5 1.01 Yes 0 0 No -25 0.88 Yes 43 46.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94150932 - NM_005591 MRE11 0 . . . 2.09 62.79 25 6.56 Yes 36 1.33 Yes 0 0 No -24 0.96 Yes 42 65.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59937040 - NM_032043 BRIP1 0 . . . 4.92 78.64 18 7 Yes 8 1.66 Yes 0 0 No -28 0.59 No 50 92.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108168278 + NM_000051 ATM 0 . . . 0.58 75.25 27 6.02 Yes 48 -3.95 No 0 0 No -25 0.34 No 51 60.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68715045 + NM_133509 RAD51B 0 . . . 0.17 75.63 25 5.39 No 51 0.55 No 0 0 No -22 0.7 Yes 44 51.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52440588 - NM_004656 BAP1 0 . . . 0.96 0 16 4.69 No 23 -1.24 No 0 0 No -18 0.5 No 39 70.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56798819 + NM_058216 RAD51C 0 . . . 3.22 67.28 24 5.16 No -1 0.08 No 0 0 No -23 0.55 No 42 90.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21986963 - NM_000077 CDKN2A 0 . . . 11.39 95.3 15 5.1 No 0 1.13 Yes 0 0 No -19 0.32 No 41 69.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68880585 + NM_133509 RAD51B 0 . . . 0.52 0 14 5.3 No 64 0.36 No 0 0 No -33 0.37 No 21 30.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69027593 + NM_133509 RAD51B 0 . . . 0.77 74.15 36 6.43 Yes 4 0.76 No 0 0 No -35 0.45 No 43 62.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68285784 + NM_133509 RAD51B 0 . . . 0.38 87.74 17 4.8 No 76 -3.19 No 0 0 No -59 0.22 No 42 72.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69136975 + NM_133509 RAD51B 0 . . . 3.72 74.81 16 4.42 No 21 -1.48 No 0 0 No -21 0.73 Yes 50 49.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108145429 + NM_000051 ATM 0 . . . 5.6 85.83 30 5.17 No -4 0.75 No 0 0 No -22 0.69 Yes 49 78.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48028625 + NM_000179 MSH6 0 . . . 2.99 86.14 20 5.57 Yes 3 0.79 Yes 0 0 No -19 0.64 No 50 87.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68440509 + NM_133509 RAD51B 0 . . . 4.68 81.85 27 5.63 Yes 23 -3.68 No 0 0 No -26 0.54 No 50 48.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131947830 + NM_005732 RAD50 0 . . . 0.19 65.14 15 5.94 Yes 53 0.45 No 0 0 No -20 0.79 Yes 23 21.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47651354 + NM_000251 MSH2 0 . . . 2.97 76.36 91 9.68 Yes 34 -1.7 No 0 0 No -28 0.68 Yes 48 81.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68494837 + NM_133509 RAD51B 0 . . . 5.66 80.72 22 4.19 No 57 0.92 Yes 0 0 No -21 0.44 No 44 51.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68531340 + NM_133509 RAD51B 0 . . . 0.03 0 30 6.97 Yes 25 0.74 No 0 0 No -29 0.76 Yes 33 73.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89676435 + NM_000314 PTEN 0 . . . 2.14 65.79 44 5.97 Yes 68 -2.69 No 0 0 No -33 0.85 Yes 37 82.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59793323 - NM_032043 BRIP1 0 . . . 1.14 70.2 13 4.9 No 65 1.42 Yes 0 0 No -19 0.38 No 51 36.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152361147 - NM_005431 XRCC2 0 . . . 0.39 63.5 20 4.54 No 28 -3.1 No 0 0 No -19 0.5 No 27 37.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89668991 + NM_000314 PTEN 0 . . . 7.67 98.64 24 5.8 Yes 74 0.07 No 0 0 No -28 0.88 Yes 49 78.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23638663 - NM_024675 PALB2 0 . . . 1.63 68.38 63 6.57 Yes 52 1.16 Yes 0 0 No -49 0.57 No 48 72.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37079317 + NM_000249 MLH1 0 . . . 1.96 80.12 9 4.29 No 69 1.29 Yes 0 0 No -58 0.65 No 47 43.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47663172 + NM_000251 MSH2 0 . . . 3.57 88.38 13 4.4 No 2 1.28 Yes 0 0 No -12 0.31 No 56 37.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90947892 - NM_002485 NBN 0 . . . 1.09 77.72 15 4.64 No 66 0.53 No 0 0 No -23 0.7 Yes 43 78.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84387826 - NM_139076 FAM175A 0 . . . 0.98 63.56 22 4.95 No 58 1.2 Yes 0 0 No -21 0.8 Yes 42 48.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69046337 + NM_133509 RAD51B 0 . . . 4.55 75.6 11 4.58 No 12 0.63 No 0 0 No -19 0.47 No 46 53.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40985886 + NM_001164269 RAD51 0 . . . 0.24 80.65 21 5.2 No 13 0.61 No 0 0 No -20 0.83 Yes 50 80.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68759410 + NM_133509 RAD51B 0 . . . 2.67 74.3 20 5.47 No 60 -1.83 No 0 0 No -23 0.48 No 41 71.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94182894 - NM_005591 MRE11 0 . . . 1.49 77.4 20 5.09 No 65 -4.71 No 0 0 No -22 0.54 No 51 35.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23623078 - NM_024675 PALB2 0 . . . 0.34 53.42 30 5.48 No 15 0.22 No 0 0 No -27 0.84 Yes 43 29.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68817506 + NM_133509 RAD51B 0 . . . 5.51 82.39 17 5.2 No 37 1.99 Yes 0 0 No -20 0.63 No 40 81.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68583289 + NM_133509 RAD51B 0 . . . 2.98 79.76 29 5.19 No 66 0.29 No 0 0 No -26 0.83 Yes 43 76.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68794399 + NM_133509 RAD51B 0 . . . 2.02 69.8 27 4.66 No -1 0.59 No 0 0 No -26 0.66 Yes 49 68.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68636384 + NM_133509 RAD51B 0 . . . 5.96 82.98 16 5.83 Yes 61 1.16 Yes 0 0 No -38 0.32 No 38 40.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69132018 + NM_133509 RAD51B 0 . . . 4.93 85.28 34 6.23 Yes 12 0.58 No 0 0 No -33 0.7 Yes 46 76.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68620759 + NM_133509 RAD51B 0 . . . 5.77 73.37 24 5.8 Yes 37 0.91 Yes 0 0 No -24 0.42 No 43 43.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59828734 - NM_032043 BRIP1 0 . . . 4.36 78.97 25 5.57 Yes 25 0.44 No 0 0 No -24 0.79 Yes 36 53.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89624484 + NM_000314 PTEN 0 . . . 0.66 69.35 26 6.56 Yes 40 0.05 No 0 0 No -25 0.87 Yes 48 64.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32890086 + NM_000059 BRCA2 0 . . . 2.42 0 15 4.58 No 10 0.84 Yes 0 0 No -57 0.81 Yes 40 50.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89679662 + NM_000314 PTEN 0 . . . 1.3 0 24 4.54 No 76 0.88 Yes 0 0 No -18 0.52 No 38 69.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68865694 + NM_133509 RAD51B 0 . . . 3.66 70.68 18 4.17 No 33 0.16 No 0 0 No -24 0.6 No 43 43.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32946291 + NM_000059 BRCA2 0 . . . 3.97 77.19 35 6.06 Yes 60 1.06 Yes 0 0 No -34 0.93 Yes 49 65.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68740565 + NM_133509 RAD51B 0 . . . 0.53 0 18 4.72 No 51 0.46 No 0 0 No -24 0.59 No 49 56.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59769334 - NM_032043 BRIP1 0 . . . 2.3 67.57 13 5.07 No 2 1.35 Yes 0 0 No -22 0.28 No 32 65.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900245 + NM_133509 RAD51B 0 . . . 6.48 84.97 34 5.72 Yes 4 1.97 Yes 0 0 No -31 0.76 Yes 46 60.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68736134 + NM_133509 RAD51B 0 . . . 6.63 85.82 32 5.89 Yes 38 2.05 Yes 0 0 No -24 0.87 Yes 51 60.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68364579 + NM_133509 RAD51B 0 . . . 0.11 74.73 21 5.04 No 35 1.08 Yes 0 0 No -20 0.62 No 23 72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1211776 + NM_000455 STK11 0 . . . 3.18 0 11 3.87 No 64 -1.98 No 0 0 No -28 0.5 No 46 65.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68821191 + NM_004360 CDH1 0 . . . 5.12 80.96 32 5.66 Yes 38 -1.57 No 0 0 No -31 0.37 No 42 53.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131968304 + NM_005732 RAD50 0 . . . 1.28 62 28 5.38 No 24 0.44 No 0 0 No -27 0.62 No 40 52.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69035730 + NM_133509 RAD51B 0 . . . 4 76.85 24 5.68 Yes 50 -3.88 No 0 0 No -23 0.66 No 48 56.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69126670 + NM_133509 RAD51B 0 . . . 2.72 76.43 21 5.66 Yes 43 -3.48 No 0 0 No -26 0.33 No 42 64.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68536020 + NM_133509 RAD51B 0 . . . 2.92 0 23 4.65 No -3 -2.18 No 0 0 No -22 0.81 Yes 49 54.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108187741 + NM_000051 ATM 0 . . . 0.38 0 45 7.4 Yes 38 0.85 Yes 0 0 No -31 0.56 No 53 63.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152358148 - NM_005431 XRCC2 0 . . . 2.64 83.65 30 5.43 No 47 1.51 Yes 0 0 No -29 0.72 Yes 50 71.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215644816 - NM_000465 BARD1 0 . . . 2.42 80.14 31 5.86 Yes 9 0.16 No 0 0 No -30 0.89 Yes 45 50.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104174256 - NM_001100119 XRCC3 0 . . . 4.87 74.02 27 5.72 Yes 74 -4.84 No 0 0 No -26 0.53 No 50 48.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75486926 - NM_001040108 MLH3 0 . . . 8.52 82.03 23 5.65 Yes 72 1.43 Yes 0 0 No -23 0.49 No 45 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68898445 + NM_133509 RAD51B 0 . . . 5.31 86.79 27 5.43 No 32 0.99 Yes 0 0 No -26 0.9 Yes 43 64.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215662548 - NM_000465 BARD1 0 . . . 8.62 89.13 23 5.39 No 16 1.04 Yes 0 0 No -29 0.33 No 42 78.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68642640 + NM_133509 RAD51B 0 . . . 0.43 0 50 6.81 Yes 75 1.17 Yes 0 0 No -29 0.89 Yes 33 81.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45794917 - NM_001048171 MUTYH 0 . . . 3.49 81.98 33 5.56 Yes 41 0.89 Yes 0 0 No -28 0.6 No 48 84.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68546391 + NM_133509 RAD51B 0 . . . 2.18 66.84 12 6.08 Yes 49 0.88 Yes 0 0 No -26 0.51 No 44 86.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68951691 + NM_133509 RAD51B 0 . . . 0.32 69.18 23 5.83 Yes 59 2.38 Yes 0 0 No -22 0.8 Yes 38 83.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37038288 + NM_000249 MLH1 0 . . . 0.98 0 13 4.92 No 73 -1.2 No 0 0 No -18 0.3 No 36 67.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68980077 + NM_133509 RAD51B 0 . . . 3.77 67.92 24 4.51 No 6 0.97 Yes 0 0 No -24 0.21 No 52 90.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68639287 + NM_133509 RAD51B 0 . . . 2.32 62.74 29 6.9 Yes 2 -1.42 No 0 0 No -31 0.85 Yes 52 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37067329 + NM_000249 MLH1 0 . . . 1.75 74.88 27 5.24 No 48 0.85 Yes 0 0 No -26 0.6 No 49 56.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32959597 + NM_000059 BRCA2 0 . . . 4.47 80.71 32 5.53 No 67 -1.57 No 0 0 No -28 0.34 No 46 65.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47771032 + NM_000251 MSH2 0 . . . 4.09 76.57 15 6 Yes 63 0.42 No 0 0 No -30 0.79 Yes 53 52.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59904011 - NM_032043 BRIP1 0 . . . 3.08 74.33 20 6.22 Yes 47 1 Yes 0 0 No -24 0.67 Yes 32 94.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47642183 + NM_000251 MSH2 0 . . . 6.21 81 17 3.84 No 6 0.56 No 0 0 No -31 0.53 No 47 64.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69082026 + NM_133509 RAD51B 0 . . . 3.05 0 25 5.41 No 61 1.09 Yes 0 0 No -24 0.74 Yes 45 67.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59796683 - NM_032043 BRIP1 0 . . . 5.6 71.11 29 5.13 No 58 1.2 Yes 0 0 No -22 0.79 Yes 41 77.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90963735 - NM_002485 NBN 0 . . . 0.48 0 17 4.66 No 51 0.2 No 0 0 No -21 0.61 No 40 58.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69023135 + NM_133509 RAD51B 0 . . . 13.71 88.24 15 3.98 No 10 0.8 Yes 0 0 No -22 0.75 Yes 48 87.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215623888 - NM_000465 BARD1 0 . . . 7.72 76.67 20 5.1 No 73 1.13 Yes 0 0 No -41 0.42 No 48 46.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68813427 + NM_133509 RAD51B 0 . . . 5.63 77.46 22 4.84 No 23 1.16 Yes 0 0 No -21 0.9 Yes 35 84.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68374798 + NM_133509 RAD51B 0 . . . 2.6 74.28 9 3.87 No 57 0.49 No 0 0 No -36 0.35 No 46 49.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68649208 + NM_133509 RAD51B 0 . . . 7.73 86.02 13 5.57 Yes 12 0.09 No 0 0 No -24 0.43 No 34 46.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45793832 - NM_001048171 MUTYH 0 . . . 1.02 0 22 6.32 Yes 27 1.38 Yes 0 0 No -21 0.7 Yes 62 23.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215628957 - NM_000465 BARD1 0 . . . 5.34 79.36 19 4.9 No 17 1.42 Yes 0 0 No -18 0.33 No 41 93.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59757686 - NM_032043 BRIP1 0 . . . 4.22 84.17 22 5.6 Yes 76 0.35 No 0 0 No -24 0.9 Yes 48 66.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68502900 + NM_133509 RAD51B 0 . . . 2.72 69.06 18 5.29 No 75 1.23 Yes 0 0 No -17 0.54 No 47 95.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68871075 + NM_004360 CDH1 0 . . . 2.83 68.44 29 8.6 Yes 51 -0.18 No 0 0 No -28 0.9 Yes 43 70.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89654773 + NM_000314 PTEN 0 . . . 4.4 0 39 6.32 Yes 70 -5.79 No 0 0 No -18 0.61 No 53 38.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59774778 - NM_032043 BRIP1 0 . . . 0.71 58.45 13 5.03 No 71 -5.11 No 0 0 No -28 0.66 No 47 76.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215615401 - NM_000465 BARD1 0 . . . 1.89 79.67 35 6.4 Yes 42 1.16 Yes 0 0 No -34 0.62 No 46 95.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89720366 + NM_000314 PTEN 0 . . . 4.46 73.86 26 4.64 No 70 -4.21 No 0 0 No -25 0.68 Yes 40 35.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68368137 + NM_133509 RAD51B 0 . . . 2.39 0 34 6.54 Yes 14 0.44 No 0 0 No -20 0.35 No 43 65.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29095490 - NM_001005735 CHEK2 0 . . . 4.88 73.55 17 5.57 Yes 59 1.08 Yes 0 0 No -16 0.74 Yes 42 48.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69088071 + NM_133509 RAD51B 0 . . . 7.26 81.18 17 4.79 No 13 1.03 Yes 0 0 No -16 0.3 No 45 94.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90948767 - NM_002485 NBN 0 . . . 4.19 0 19 5.99 Yes 16 0.04 No 0 0 No -26 0.47 No 36 35.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6020050 - NM_000535 PMS2 0 . . . 5.03 67.96 28 4.33 No 12 1.11 Yes 0 0 No -27 0.63 No 46 82.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90946718 - NM_002485 NBN 0 . . . 1.41 81 27 5.2 No 25 0.32 No 0 0 No -27 0.32 No 24 57.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40995966 + NM_001164269 RAD51 0 . . . 3.63 74.94 33 5.29 No 0 0.75 No 0 0 No -30 0.36 No 38 87.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68729739 + NM_133509 RAD51B 0 . . . 4.21 79.37 54 6.11 Yes 6 1.01 Yes 0 0 No -27 0.92 Yes 35 61.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59784346 - NM_032043 BRIP1 0 . . . 1.63 75.23 12 5.08 No 52 -4.86 No 0 0 No -22 0.66 No 51 28.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47805511 + NM_000251 MSH2 0 . . . 1.77 76.08 22 6.82 Yes 74 1.47 Yes 0 0 No -21 0.41 No 47 90.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190705754 + NM_000534 PMS1 0 . . . 1.41 65.01 83 9.88 Yes 20 0.11 No 0 0 No -26 0.65 No 34 64.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48031842 + NM_000179 MSH6 0 . . . 5.24 79.11 34 5.58 Yes -1 1.62 Yes 0 0 No -33 0.88 Yes 48 60.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89673664 + NM_000314 PTEN 0 . . . 8.23 90.72 24 5.19 No 60 1.45 Yes 0 0 No -23 0.7 Yes 47 70.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131940222 + NM_005732 RAD50 0 . . . 0.42 0 20 5.57 Yes 23 1.58 Yes 0 0 No -19 0.74 Yes 40 47.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32917512 + NM_000059 BRCA2 0 . . . 3.25 60.13 22 7.53 Yes 34 0.89 Yes 0 0 No -27 0.51 No 55 43.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59889909 - NM_032043 BRIP1 0 . . . 5.33 77.68 13 4.8 No 40 0.3 No 0 0 No -18 0.47 No 33 77.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47752454 + NM_000251 MSH2 0 . . . 9.47 86.09 18 6.25 Yes -4 1.16 Yes 0 0 No -24 0.87 Yes 46 40.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68660635 + NM_133509 RAD51B 0 . . . 2.12 77.25 25 5.19 No 57 0.47 No 0 0 No -24 0.87 Yes 45 75.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68751932 + NM_133509 RAD51B 0 . . . 4.86 74.48 17 4.49 No 21 0.88 Yes 0 0 No -25 0.52 No 37 98.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68837209 + NM_004360 CDH1 0 . . . 1.56 73.09 23 4.04 No 9 1.22 Yes 0 0 No -21 0.44 No 49 81.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47704419 + NM_000251 MSH2 0 . . . 7.68 78.92 24 4.93 No 6 1.27 Yes 0 0 No -27 0.46 No 46 51.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90946734 - NM_002485 NBN 0 . . . 0.13 61 24 4.61 No 68 1.07 Yes 0 0 No -23 0.89 Yes 40 69.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32959475 + NM_000059 BRCA2 0 . . . 4.71 78.47 27 4.56 No 8 0.26 No 0 0 No -26 0.48 No 49 73.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108237594 + NM_000051 ATM 0 . . . 0.3 66.88 26 5.12 No 13 0.51 No 0 0 No -25 0.71 Yes 40 66.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68779189 + NM_133509 RAD51B 0 . . . 5.25 79.56 40 6.3 Yes 42 -4.51 No 0 0 No -22 0.72 Yes 47 96.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41019695 + NM_001164269 RAD51 0 . . . 3.92 85.02 20 4.92 No 60 -2.38 No 0 0 No -44 0.7 Yes 45 69.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23621037 - NM_024675 PALB2 0 . . . 2.31 71.02 14 6.16 Yes 61 -3.84 No 0 0 No -28 0.74 Yes 51 21.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75512316 - NM_001040108 MLH3 0 . . . 0.62 74.8 24 5.46 No 57 0.62 No 0 0 No -23 0.93 Yes 49 75.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105199438 + NM_021930 RINT1 0 . . . 6.65 74.11 18 4.9 No 2 0.23 No 0 0 No -34 0.58 No 49 55.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59916341 - NM_032043 BRIP1 0 . . . 3.64 0 30 3.77 No 45 1.34 Yes 0 0 No -29 0.34 No 51 55.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89678662 + NM_000314 PTEN 0 . . . 4.83 79.51 23 6.61 Yes 38 -3.2 No 0 0 No -22 0.76 Yes 47 70.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75480697 - NM_001040108 MLH3 0 . . . 5.29 80.2 28 3.43 No 16 1.39 Yes 0 0 No -27 0.35 No 42 88.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68972979 + NM_133509 RAD51B 0 . . . 1.64 73.26 22 4.8 No 53 1.02 Yes 0 0 No -21 0.82 Yes 45 40.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47660100 + NM_000251 MSH2 0 . . . 1.43 69.22 28 5.29 No 34 -2.38 No 0 0 No -27 0.57 No 50 46.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68936262 + NM_133509 RAD51B 0 . . . 3.3 57.02 16 3.78 No 15 0.54 No 0 0 No -26 0.54 No 43 38.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640031 + NM_000251 MSH2 0 . . . 3.92 80.12 24 6.08 Yes 10 1.19 Yes 0 0 No -23 0.39 No 48 95.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68390831 + NM_133509 RAD51B 0 . . . 9.01 84.59 18 4.87 No 9 1.4 Yes 0 0 No -25 0.46 No 49 71.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68889983 + NM_133509 RAD51B 0 . . . 2.8 66.13 18 4.69 No 63 -3.66 No 0 0 No -17 0.55 No 51 59.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68317782 + NM_133509 RAD51B 0 . . . 5.85 80.24 12 3.74 No 5 1.32 Yes 0 0 No -21 0.58 No 44 64.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152350676 - NM_005431 XRCC2 0 . . . 1.47 74.55 22 4.8 No 59 0.31 No 0 0 No -21 0.66 Yes 52 68.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59835348 - NM_032043 BRIP1 0 . . . 3.28 0 19 4.69 No 37 1.19 Yes 0 0 No -18 0.53 No 28 95.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89708348 + NM_000314 PTEN 0 . . . 4.02 74.65 18 4.24 No 64 -2.56 No 0 0 No -17 0.84 Yes 61 36.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190707422 + NM_000534 PMS1 0 . . . 3.22 83.45 30 6.77 Yes 74 -3.82 No 0 0 No -29 0.78 Yes 48 80.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59888955 - NM_032043 BRIP1 0 . . . 2.18 67.28 22 5.56 Yes 10 0.55 No 0 0 No -28 0.58 No 40 63.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108107240 + NM_000051 ATM 0 . . . 5.11 73.96 26 5.03 No 17 0.23 No 0 0 No -25 0.8 Yes 44 57.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59784009 - NM_032043 BRIP1 0 . . . 5.34 83.35 17 6.93 Yes 2 0.24 No 0 0 No -25 0.6 No 46 78.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89687034 + NM_000314 PTEN 0 . . . 2.9 78.12 23 5.04 No 3 1.2 Yes 0 0 No -23 0.5 No 55 55.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47638116 + NM_000251 MSH2 0 . . . 1.96 78.07 35 5.86 Yes 33 1.02 Yes 0 0 No -34 0.57 No 25 48.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68584084 + NM_133509 RAD51B 0 . . . 2.91 72.63 28 5.83 Yes 70 -2.86 No 0 0 No -27 0.61 No 44 50.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41250298 - NM_007294 BRCA1 0 . . . 3.58 76.59 25 5.44 No 72 0.44 No 0 0 No -24 0.68 Yes 46 70.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69051012 + NM_133509 RAD51B 0 . . . 2.76 67.4 18 3.61 No 39 -1.08 No 0 0 No -21 0.96 Yes 54 58.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68792951 + NM_004360 CDH1 0 . . . 5.04 76.97 39 9.25 Yes 12 1.55 Yes 0 0 No -30 0.74 Yes 46 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48009423 + NM_000179 MSH6 0 . . . 5.25 76.16 28 5.38 No 59 1.02 Yes 0 0 No -27 0.66 No 40 88.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215663090 - NM_000465 BARD1 0 . . . 3.41 82.62 20 5.1 No 60 -4.7 No 0 0 No -25 0.33 No 47 86.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68601343 + NM_133509 RAD51B 0 . . . 6.71 79.17 20 4.92 No 12 0.68 No 0 0 No -19 0.87 Yes 46 75.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41254260 - NM_007294 BRCA1 0 . . . 1.79 66.59 21 6.24 Yes 22 0.44 No 0 0 No -20 0.82 Yes 44 59.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37080457 + NM_000249 MLH1 0 . . . 3.84 79.38 22 4.65 No 36 0.61 No 0 0 No -21 0.52 No 51 75.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68839109 + NM_004360 CDH1 0 . . . 3.9 0 21 4.58 No 70 1.96 Yes 0 0 No -20 0.74 Yes 18 58.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68929953 + NM_133509 RAD51B 0 . . . 2.29 68.77 17 5.76 Yes 71 0.76 No 0 0 No -22 0.67 Yes 53 71.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47745022 + NM_000251 MSH2 0 . . . 2.77 72.89 28 5.44 No 27 -2.55 No 0 0 No -25 0.62 No 51 56.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6039066 - NM_000535 PMS2 0 . . . 10.89 82.71 13 5.66 Yes 23 0.7 No 0 0 No -25 0.48 No 46 36.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68788492 + NM_133509 RAD51B 0 . . . 3.08 0 21 5.2 No 68 1.62 Yes 0 0 No -20 0.38 No 47 41.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68775971 + NM_004360 CDH1 0 . . . 0.41 66.63 27 5.3 No 57 0.28 No 0 0 No -26 0.77 Yes 45 24.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41203226 - NM_007294 BRCA1 0 . . . 1.46 76.84 22 7.48 Yes 32 -2.14 No 0 0 No -21 0.54 No 48 26.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68854912 + NM_133509 RAD51B 0 . . . 4.61 71.84 31 7.02 Yes 16 1.03 Yes 0 0 No -30 0.87 Yes 42 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68432072 + NM_133509 RAD51B 0 . . . 6.39 75.38 34 5.7 Yes 34 1.54 Yes 0 0 No -23 0.53 No 37 70.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68823022 + NM_004360 CDH1 0 . . . 5.29 78.59 20 3.42 No -2 1.5 Yes 0 0 No -19 0.77 Yes 53 48.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131929373 + NM_005732 RAD50 0 . . . 2.36 73.63 21 5.2 No 8 0.68 No 0 0 No -38 0.86 Yes 50 81.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68489667 + NM_133509 RAD51B 0 . . . 0.09 66.92 18 5.48 No 13 0.69 No 0 0 No -17 0.6 No 45 62.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47736847 + NM_000251 MSH2 0 . . . 5.46 75.46 35 6.08 Yes 13 0.66 No 0 0 No -34 0.7 Yes 42 75.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68942155 + NM_133509 RAD51B 0 . . . 5.74 90.36 23 5.1 No 57 -3.51 No 0 0 No -22 0.76 Yes 47 83.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68964942 + NM_133509 RAD51B 0 . . . 1.46 58.01 20 8.36 Yes 43 -2.83 No 0 0 No -19 0.52 No 51 62.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32930508 + NM_000059 BRCA2 0 . . . 3.85 80.83 19 4.52 No 69 0.43 No 0 0 No -18 0.92 Yes 51 47.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90945471 - NM_002485 NBN 0 . . . 0.38 72.86 15 5.22 No -3 0.14 No 0 0 No -32 0.58 No 36 66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89714824 + NM_000314 PTEN 0 . . . 1.38 75.49 42 5.03 No 25 0.4 No 0 0 No -44 0.5 No 21 39.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75498270 - NM_001040108 MLH3 0 . . . 3.63 70.85 21 3.17 No 18 0.58 No 0 0 No -19 0.76 Yes 40 86.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108144596 + NM_000051 ATM 0 . . . 4.06 77.61 25 5.52 No 30 1.12 Yes 0 0 No -27 0.66 Yes 28 72.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56778525 + NM_058216 RAD51C 0 . . . 3.08 73.52 24 5.39 No 26 0.16 No 0 0 No -23 0.63 No 40 77.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41221785 - NM_007294 BRCA1 0 . . . 9.23 82.31 22 5.1 No 0 1.71 Yes 0 0 No -19 0.52 No 52 48.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47705845 + NM_000251 MSH2 0 . . . 5.41 76.27 35 7.4 Yes 50 0.58 No 0 0 No -30 0.59 No 45 69.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1203990 + NM_000455 STK11 0 . . . 3.19 0 18 5.57 Yes 43 0.16 No 0 0 No -17 0.43 No 29 69.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68450549 + NM_133509 RAD51B 0 . . . 1.05 64.22 29 4.95 No 31 -3.04 No 0 0 No -28 0.41 No 45 35.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94187652 - NM_005591 MRE11 0 . . . 1.09 0 26 4.98 No 62 -4.96 No 0 0 No -18 0.7 Yes 54 45.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23632294 - NM_024675 PALB2 0 . . . 0.61 80.24 30 3.88 No 3 0.74 No 0 0 No -27 0.58 No 50 84.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94204044 - NM_005591 MRE11 0 . . . 3.58 73.61 24 6.76 Yes 23 1.38 Yes 0 0 No -23 0.63 No 35 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68350044 + NM_133509 RAD51B 0 . . . 0.69 63.51 26 5.09 No 74 -2.36 No 0 0 No -25 0.91 Yes 48 57.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37075123 + NM_000249 MLH1 0 . . . 1.9 60.56 24 3.65 No 58 1.61 Yes 0 0 No -20 0.61 No 52 54.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152370860 - NM_005431 XRCC2 0 . . . 1.25 84.22 28 6.62 Yes 27 1.81 Yes 0 0 No -33 0.51 No 51 57.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89676865 + NM_000314 PTEN 0 . . . 0.31 79.85 13 2.97 No 61 0.54 No 0 0 No -23 0.67 Yes 35 68.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68695996 + NM_133509 RAD51B 0 . . . 1.29 75.84 14 5.51 No 3 1.34 Yes 0 0 No -19 0.56 No 42 75.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94154916 - NM_005591 MRE11 0 . . . 3.46 75.33 27 4.74 No 39 1.07 Yes 0 0 No -31 0.39 No 50 57.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190660158 + NM_000534 PMS1 0 . . . 1.82 68.05 33 5.74 Yes 37 1.89 Yes 0 0 No -26 0.55 No 21 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69117050 + NM_133509 RAD51B 0 . . . 1.45 0 24 5.29 No 41 1.92 Yes 0 0 No -24 0.57 No 32 62.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29133162 - NM_001005735 CHEK2 0 . . . 3.08 70.9 13 4.39 No 64 1.28 Yes 0 0 No -26 0.78 Yes 46 87.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89675490 + NM_000314 PTEN 0 . . . 2.39 77.32 25 7.09 Yes 63 0.47 No 0 0 No -24 0.68 Yes 50 47.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56788860 + NM_058216 RAD51C 0 . . . 0.95 0 19 6.2 Yes 24 1.23 Yes 0 0 No -27 0.71 Yes 34 95.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108131893 + NM_000051 ATM 0 . . . 7.35 81.43 45 6.98 Yes 12 0.07 No 0 0 No -37 0.81 Yes 46 85.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47750717 + NM_000251 MSH2 0 . . . 3.38 74.49 17 6.56 Yes 67 1.29 Yes 0 0 No -24 0.55 No 20 78.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131956721 + NM_005732 RAD50 0 . . . 0.4 61.6 14 4.99 No 39 0.05 No 0 0 No -20 0.87 Yes 48 42.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47668042 + NM_000251 MSH2 0 . . . 2.41 68.95 18 4.36 No 21 0.23 No 0 0 No -17 0.67 Yes 37 85.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104166493 - NM_001100119 XRCC3 0 . . . 7.04 82.9 12 4.8 No -4 1.4 Yes 0 0 No -42 0.68 Yes 50 44.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68424388 + NM_133509 RAD51B 0 . . . 0.63 61.05 16 6.08 Yes 39 0.49 No 0 0 No -30 0.75 Yes 19 69.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68792852 + NM_133509 RAD51B 0 . . . 7.38 89.48 16 4.69 No 9 1.13 Yes 0 0 No -46 0.69 Yes 49 91.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59804592 - NM_032043 BRIP1 0 . . . 5.26 82.03 17 5.98 Yes 17 1.3 Yes 0 0 No -16 0.7 Yes 41 79.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32923511 + NM_000059 BRCA2 0 . . . 0.94 71.33 12 5.29 No 74 -5.68 No 0 0 No -35 0.23 No 46 81.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89717741 + NM_000314 PTEN 0 . . . 0.33 62.01 23 5.3 No 21 1.12 Yes 0 0 No -59 0.31 No 37 64.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68852148 + NM_133509 RAD51B 0 . . . 0.62 61.77 29 5.38 No 1 0.89 Yes 0 0 No -28 0.95 Yes 51 21.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131979741 + NM_005732 RAD50 0 . . . 0.35 68.14 38 5.83 Yes 52 0.72 No 0 0 No -37 0.93 Yes 45 68.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68507026 + NM_133509 RAD51B 0 . . . 3.69 69.9 41 7.24 Yes 49 0.03 No 0 0 No -40 0.51 No 48 74.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215642509 - NM_000465 BARD1 0 . . . 5.07 80.65 35 5.47 No 52 0.43 No 0 0 No -23 0.87 Yes 28 57.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59922074 - NM_032043 BRIP1 0 . . . 0.89 0 22 5.89 Yes 49 1.74 Yes 0 0 No -22 0.84 Yes 12 53.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68373170 + NM_133509 RAD51B 0 . . . 3.14 68.42 26 5.29 No 47 0.58 No 0 0 No -25 0.75 Yes 37 71.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68968736 + NM_133509 RAD51B 0 . . . 4.11 75.89 28 3.91 No 50 1.15 Yes 0 0 No -27 0.75 Yes 44 79.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215656328 - NM_000465 BARD1 0 . . . 7.92 71.28 40 4.92 No 10 1.4 Yes 0 0 No -23 0.53 No 48 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104182751 - NM_001100119 XRCC3 0 . . . 4.84 74.21 16 4.67 No NA NA NA 0 0 No -40 0.56 No 53 52.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47701807 + NM_000251 MSH2 0 . . . 4.05 78.78 38 6.02 Yes 32 1.16 Yes 0 0 No -38 0.86 Yes 26 73.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1227994 + NM_000455 STK11 0 . . . 5.03 72.6 21 5.02 No 6 0.77 Yes 0 0 No -20 0.49 No 52 81.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68684208 + NM_133509 RAD51B 0 . . . 1.33 74.24 13 5.39 No 37 0.88 Yes 0 0 No -27 0.36 No 33 48.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59771081 - NM_032043 BRIP1 0 . . . 0.07 65.5 25 6.75 Yes 31 0.29 No 0 0 No -31 0.75 Yes 49 17.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69023146 + NM_133509 RAD51B 0 . . . 2.82 0 15 4.58 No 21 0.78 Yes 0 0 No -23 0.77 Yes 37 83.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68331909 + NM_133509 RAD51B 0 . . . 4.68 77.65 29 6.53 Yes 69 1.04 Yes 0 0 No -28 0.74 Yes 41 39.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47694073 + NM_000251 MSH2 0 . . . 4.71 81.2 28 6.32 Yes 60 0.97 Yes 0 0 No -27 0.87 Yes 50 59.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89634617 + NM_000314 PTEN 0 . . . 5.27 78.62 22 4.15 No 31 0.82 Yes 0 0 No -36 0.43 No 48 56.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1208236 + NM_000455 STK11 0 . . . 8.69 89.18 45 8.54 Yes 5 1.87 Yes 0 0 No -44 0.6 No 53 83.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56801268 + NM_058216 RAD51C 0 . . . 6.56 93.22 19 4.68 No 14 0.41 No 0 0 No -18 0.67 Yes 44 61.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108115284 + NM_000051 ATM 0 . . . 4.59 83.67 20 5.1 No 54 0.25 No 0 0 No -50 0.35 No 47 45.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190683898 + NM_000534 PMS1 0 . . . 1.28 0 12 4.69 No 1 0.81 Yes 0 0 No -31 0.26 No 35 81.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47725888 + NM_000251 MSH2 0 . . . 0.73 61.08 21 5.04 No 45 0.18 No 0 0 No -20 0.49 No 43 36.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41275237 - NM_007294 BRCA1 0 . . . 7.82 92.14 34 5.58 Yes 37 0.05 No 0 0 No -20 0.6 No 49 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68310569 + NM_133509 RAD51B 0 . . . 5.92 82.24 32 5.72 Yes 39 1.49 Yes 0 0 No -31 0.73 Yes 36 73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94169379 - NM_005591 MRE11 0 . . . 2.18 71.78 23 3.95 No 8 1.57 Yes 0 0 No -26 0.82 Yes 50 80.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59836031 - NM_032043 BRIP1 0 . . . 3.32 0 21 7.21 Yes 34 1.13 Yes 0 0 No -20 0.82 Yes 40 85.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68327662 + NM_133509 RAD51B 0 . . . 0.67 66.72 14 4.51 No 55 1.06 Yes 0 0 No -26 0.63 No 54 78.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68815620 + NM_133509 RAD51B 0 . . . 3.97 0 17 4.47 No 7 1.76 Yes 0 0 No -40 0.56 No 51 64.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94156431 - NM_005591 MRE11 0 . . . 8.04 81.88 29 4.52 No 0 1.92 Yes 0 0 No -22 0.65 No 46 76.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104178538 - NM_001100119 XRCC3 0 . . . 2.69 73.22 24 5.29 No 40 -3.07 No 0 0 No -23 0.85 Yes 52 17.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68626825 + NM_133509 RAD51B 0 . . . 0.04 71.7 30 5.62 Yes 27 0.77 Yes 0 0 No -29 0.62 No 51 59.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47690436 + NM_000251 MSH2 0 . . . 2.55 75.2 14 4.93 No 24 0.99 Yes 0 0 No -26 0.69 Yes 34 53.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68850488 + NM_133509 RAD51B 0 . . . 7.37 78.83 9 3.87 No 19 0.62 No 0 0 No -27 0.66 No 39 94.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89666211 + NM_000314 PTEN 0 . . . 3.99 83.04 20 4.71 No 66 1.24 Yes 0 0 No -19 0.56 No 42 44.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68390979 + NM_133509 RAD51B 0 . . . 8.05 79.06 14 6.23 Yes 55 1.25 Yes 0 0 No -26 0.94 Yes 42 55.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59856658 - NM_032043 BRIP1 0 . . . 0.08 71.43 27 6.65 Yes 52 0.43 No 0 0 No -27 0.44 No 48 84.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56787594 + NM_058216 RAD51C 0 . . . 0.97 74.68 74 8.66 Yes 17 0.09 No 0 0 No -22 0.31 No 49 48.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68963448 + NM_133509 RAD51B 0 . . . 4.07 80.1 27 5.33 No 9 -2.18 No 0 0 No -27 0.81 Yes 46 79.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68661888 + NM_133509 RAD51B 0 . . . 0.53 0 12 5.29 No 4 -2.34 No 0 0 No -23 0.62 No 54 43.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21994376 - NM_000077 CDKN2A 0 . . . 2.04 73.96 28 5.06 No 4 0.54 No 0 0 No -28 0.38 No 54 45.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32974543 + NM_000059 BRCA2 0 . . . 6.89 78.73 25 5.57 Yes 71 0.95 Yes 0 0 No -24 0.79 Yes 43 85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68956958 + NM_133509 RAD51B 0 . . . 5.16 81.26 20 3.91 No 25 0.36 No 0 0 No -19 0.49 No 45 72.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23641254 - NM_024675 PALB2 0 . . . 3.53 82.69 14 5.48 No 35 1.46 Yes 0 0 No -25 0.7 Yes 23 62.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56791305 + NM_058216 RAD51C 0 . . . 6.86 73.08 19 4.11 No 27 -1.18 No 0 0 No -58 0.58 No 48 53.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68859700 + NM_004360 CDH1 0 . . . 3.8 82.25 63 7.25 Yes 9 1.56 Yes 0 0 No -27 0.38 No 49 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68353772 + NM_133509 RAD51B 0 . . . 1.21 73.58 27 5.39 No 50 1.03 Yes 21 0.22 Yes -26 0.95 Yes 60 40.67 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr22 29084464 - NM_001005735 CHEK2 0 . . . 1.58 75.18 20 4.83 No 33 0.88 Yes 0 0 No -17 0.41 No 44 44.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108145266 + NM_000051 ATM 0 . . . 4.1 60.91 18 4.9 No 58 0.43 No 0 0 No -24 0.45 No 42 72.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84400798 - NM_139076 FAM175A 0 . . . 2.81 75.21 14 3.93 No 24 0.12 No 0 0 No -23 0.5 No 52 62.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94150409 - NM_005591 MRE11 0 . . . 2.69 80.45 19 5.39 No 4 1.37 Yes 0 0 No -22 0.63 No 46 67.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68727504 + NM_133509 RAD51B 0 . . . 2.43 62.49 17 4.68 No 39 0.99 Yes 0 0 No -20 0.52 No 40 47.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37039633 + NM_000249 MLH1 0 . . . 4.54 78.83 23 4.77 No 60 -5.35 No 0 0 No -22 0.88 Yes 52 73.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37072802 + NM_000249 MLH1 0 . . . 4.13 64.82 25 4.87 No 16 0.86 Yes 0 0 No -24 0.56 No 42 79.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190726850 + NM_000534 PMS1 0 . . . 3.75 60.43 22 4.08 No 59 1.95 Yes 0 0 No -21 0.65 No 57 21.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68842424 + NM_004360 CDH1 0 . . . 5.8 82.94 27 4.04 No 53 1.56 Yes 27 0.28 Yes -26 0.82 Yes 48 43.45 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 75509889 - NM_001040108 MLH3 0 . . . 3.92 88.12 29 7.35 Yes 3 0.69 No 0 0 No -28 0.85 Yes 35 97.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37049653 + NM_000249 MLH1 0 . . . 0.62 84.41 22 4.15 No 27 0.34 No 0 0 No -57 0.33 No 40 76.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41207498 - NM_007294 BRCA1 0 . . . 4.6 79.69 53 7.61 Yes 7 0.7 No 0 0 No -19 0.58 No 50 65.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108169621 + NM_000051 ATM 0 . . . 3.35 73.53 12 6.44 Yes 47 -3.35 No 0 0 No -38 0.8 Yes 43 51.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215641561 - NM_000465 BARD1 0 . . . 3.09 77.19 16 4.69 No 34 1.31 Yes 0 0 No -19 0.71 Yes 24 60.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41223672 - NM_007294 BRCA1 0 . . . 1.49 70.34 23 5.74 Yes 51 0.65 No 0 0 No -22 0.71 Yes 50 69.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47743763 + NM_000251 MSH2 0 . . . 0.34 61.64 16 4.69 No 7 -2.12 No 0 0 No -57 0.8 Yes 45 93.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68816457 + NM_004360 CDH1 0 . . . 2.17 70.94 29 4.92 No 61 0.69 No 0 0 No -21 0.53 No 48 91.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59928422 - NM_032043 BRIP1 0 . . . 2.24 80.12 15 5.66 Yes 7 1.02 Yes 0 0 No -25 0.63 No 51 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68941250 + NM_133509 RAD51B 0 . . . 2.12 78.2 18 7 Yes 1 1.49 Yes 0 0 No -31 0.4 No 44 85.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29125975 - NM_001005735 CHEK2 0 . . . 0.49 67.82 26 5.38 No 42 0.6 No 0 0 No -25 0.84 Yes 52 28.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59823990 - NM_032043 BRIP1 0 . . . 1.04 76.66 22 5.29 No 30 1.2 Yes 0 0 No -45 0.56 No 49 93.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68759424 + NM_133509 RAD51B 0 . . . 1.26 73.96 31 5.28 No 74 -1.84 No 0 0 No -56 0.72 Yes 27 55.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23627833 - NM_024675 PALB2 0 . . . 3.2 64.64 14 5.18 No 2 -1.65 No 0 0 No -20 0.5 No 41 68.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190648432 + NM_000534 PMS1 0 . . . 4.82 70.9 17 4 No 68 1.29 Yes 0 0 No -27 0.42 No 39 82.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47804292 + NM_000251 MSH2 0 . . . 0.88 0 35 7.12 Yes 17 0.61 No 0 0 No -34 0.37 No 41 97.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108217138 + NM_000051 ATM 0 . . . 5.7 82.55 23 5.39 No 4 1.1 Yes 0 0 No -22 0.36 No 41 51.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59904625 - NM_032043 BRIP1 0 . . . 8.21 78.94 36 4.66 No 24 1.88 Yes 0 0 No -38 0.4 No 18 73.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68807166 + NM_133509 RAD51B 0 . . . 1.34 61.91 46 7.48 Yes 63 -3.84 No 0 0 No -27 0.36 No 49 49.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68487081 + NM_133509 RAD51B 0 . . . 0.47 81.52 20 5.1 No 13 0.57 No 0 0 No -20 0.43 No 50 82.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89637165 + NM_000314 PTEN 0 . . . 4.14 72.55 33 4.71 No 36 0.92 Yes 0 0 No -27 0.78 Yes 22 65.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68321431 + NM_133509 RAD51B 0 . . . 0.32 74.68 19 5 No 4 0.1 No 0 0 No -43 0.39 No 54 73.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68832280 + NM_133509 RAD51B 0 . . . 1.12 67.65 29 5.59 Yes 27 0.27 No 0 0 No -58 0.4 No 50 63.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32889607 + NM_000059 BRCA2 0 . . . 2.54 67.61 17 4.36 No 40 -1.83 No 0 0 No -41 0.44 No 27 23.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108108037 + NM_000051 ATM 0 . . . 2.76 0 22 4.8 No 5 1.45 Yes 0 0 No -19 0.62 No 53 90.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68455062 + NM_133509 RAD51B 0 . . . 0.93 78.47 21 5.2 No 53 0.18 No 0 0 No -20 0.61 No 52 74.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69047441 + NM_133509 RAD51B 0 . . . 11.72 89.63 20 7.14 Yes 8 1.64 Yes 0 0 No -19 0.72 Yes 47 78.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69125427 + NM_133509 RAD51B 0 . . . 6.1 73.51 27 6.23 Yes 24 0.64 No 0 0 No -33 0.77 Yes 34 94.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84392175 - NM_139076 FAM175A 0 . . . 3.65 71.65 22 5.66 Yes 46 1.05 Yes 0 0 No -21 0.83 Yes 48 61.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32911936 + NM_000059 BRCA2 0 . . . 0.14 66.12 20 5.1 No 70 -6.04 No 0 0 No -19 0.8 Yes 54 19.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41013926 + NM_001164269 RAD51 0 . . . 0.95 59.98 28 5.87 Yes 37 -3.62 No 0 0 No -27 0.76 Yes 35 82.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68950484 + NM_133509 RAD51B 0 . . . 8.23 81.68 32 7.55 Yes 14 0.99 Yes 0 0 No -31 0.85 Yes 44 77.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131917022 + NM_005732 RAD50 0 . . . 2 80.34 23 5 No 19 -1.91 No 0 0 No -22 0.76 Yes 42 31.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68798580 + NM_004360 CDH1 0 . . . 1.97 74.43 31 5.74 Yes 74 -2.99 No 0 0 No -30 0.86 Yes 36 68.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68710916 + NM_133509 RAD51B 0 . . . 4.35 77.25 30 5.57 Yes 6 -1.72 No 0 0 No -29 0.64 No 49 73.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68679882 + NM_133509 RAD51B 0 . . . 1.35 0 40 6.39 Yes 36 0.69 No 0 0 No -26 0.47 No 44 39.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59907762 - NM_032043 BRIP1 0 . . . 7.9 73.52 22 5.26 No 50 0.65 No 0 0 No -21 0.39 No 49 54.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668861 - NM_000465 BARD1 0 . . . 1.46 68.46 29 6.33 Yes 58 0.67 No 0 0 No -28 0.9 Yes 43 42.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56793118 + NM_058216 RAD51C 0 . . . 1.13 73.41 20 4.47 No 56 1.15 Yes 0 0 No -19 0.89 Yes 25 85.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68630080 + NM_133509 RAD51B 0 . . . 6.14 83.47 10 5.83 Yes 76 0.77 No 0 0 No -22 0.6 No 31 77.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68614972 + NM_133509 RAD51B 0 . . . 7.23 76.79 34 6.78 Yes 12 0.87 Yes 0 0 No -33 0.65 No 46 66.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89732666 + NM_000314 PTEN 0 . . . 6.95 81.99 33 6.02 Yes 26 1.04 Yes 0 0 No -32 0.43 No 32 93.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152369203 - NM_005431 XRCC2 0 . . . 4.95 81.75 22 5.31 No 36 1.18 Yes 0 0 No -21 0.8 Yes 44 32.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41241094 - NM_007294 BRCA1 0 . . . 0.21 78.49 46 7.2 Yes 13 1.5 Yes 0 0 No -45 0.76 Yes 45 82.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56809274 + NM_058216 RAD51C 0 . . . 2.79 67.65 16 5.48 No 71 1.4 Yes 0 0 No -23 0.46 No 47 80.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190677327 + NM_000534 PMS1 0 . . . 2.43 0 20 4.71 No 28 -3.51 No 0 0 No -19 0.95 Yes 47 70.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41230971 - NM_007294 BRCA1 0 . . . 2.45 69.49 29 5.57 Yes 23 1.59 Yes 0 0 No -27 0.47 No 35 60.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69114490 + NM_133509 RAD51B 0 . . . 5.62 88.68 24 6.16 Yes 9 1.65 Yes 0 0 No -23 0.92 Yes 49 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108095900 + NM_000051 ATM 0 . . . 2.09 78.05 39 6.7 Yes 7 0.76 No 0 0 No -38 0.93 Yes 51 77.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94189679 - NM_005591 MRE11 0 . . . 5.88 85.05 31 7.46 Yes 71 0.68 No 0 0 No -23 0.78 Yes 51 69.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41260553 - NM_007294 BRCA1 0 . . . 3.38 80.12 23 5.5 No 65 1.38 Yes 0 0 No -22 0.89 Yes 49 90.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48021134 + NM_000179 MSH6 0 . . . 2.82 70.85 29 6.33 Yes 23 1.58 Yes 0 0 No -28 0.44 No 45 66.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68833352 + NM_004360 CDH1 0 . . . 4.56 0 35 6.07 Yes 48 0.97 Yes 0 0 No -34 0.73 Yes 33 49.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190654479 + NM_000534 PMS1 0 . . . 0.76 74.89 20 5.66 Yes 64 1.23 Yes 0 0 No -22 0.68 Yes 50 82.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47629147 + NM_000251 MSH2 0 . . . 7.9 82.73 25 4.84 No 74 1.78 Yes 0 0 No -25 0.61 No 15 42.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190648560 + NM_000534 PMS1 0 . . . 4.63 92.77 34 5.9 Yes 22 1.09 Yes 0 0 No -33 0.68 Yes 47 75.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47719903 + NM_000251 MSH2 0 . . . 0.19 53.36 22 5 No 31 0.11 No 0 0 No -21 0.77 Yes 27 73.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6047074 - NM_000535 PMS2 0 . . . 0.61 85.49 28 5.59 Yes -4 0.26 No 0 0 No -28 0.74 Yes 50 91.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68429882 + NM_133509 RAD51B 0 . . . 4.39 82.42 18 5.92 Yes 28 0.67 No 0 0 No -23 0.43 No 46 74.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48024789 + NM_000179 MSH6 0 . . . 4.18 75.5 27 5.2 No 65 1.11 Yes 0 0 No -26 0.78 Yes 49 78.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68775068 + NM_004360 CDH1 0 . . . 7.24 75.77 22 5.29 No 46 -4.47 No 0 0 No -21 0.89 Yes 45 75.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68799410 + NM_004360 CDH1 0 . . . 6.71 81.96 29 8.24 Yes 71 0.67 No 0 0 No -28 0.78 Yes 31 59.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108239319 + NM_000051 ATM 0 . . . 0.79 65.49 27 5.34 No -2 0.61 No 0 0 No -26 0.96 Yes 60 77.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59845906 - NM_032043 BRIP1 0 . . . 5.6 75 13 3.85 No 5 0.32 No 0 0 No -38 0.61 No 39 76.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68976775 + NM_133509 RAD51B 0 . . . 6.07 73.18 13 5.29 No 0 1.98 Yes 0 0 No -44 0.4 No 49 80.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33431532 - NM_002878 RAD51D 0 . . . 4.95 67.12 28 4.27 No 56 0.95 Yes 0 0 No -27 0.53 No 42 54.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84389220 - NM_139076 FAM175A 0 . . . 0.05 78.4 44 5.21 No 3 0.79 Yes 0 0 No -31 0.71 Yes 50 69.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45804614 - NM_001048171 MUTYH 0 . . . 2.17 66.69 19 5 No 9 0.41 No 0 0 No -26 0.43 No 43 74.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89628898 + NM_000314 PTEN 0 . . . 4.36 81.05 17 4 No 46 0.39 No 0 0 No -32 0.58 No 46 80.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41004918 + NM_001164269 RAD51 0 . . . 4.32 81.41 23 4.86 No 50 0.55 No 0 0 No -29 0.54 No 38 70.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33448499 - NM_002878 RAD51D 0 . . . 1.76 69.8 30 6.39 Yes 57 0.45 No 0 0 No -29 0.92 Yes 52 18.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104177437 - NM_001100119 XRCC3 0 . . . 2.49 69.58 13 4.36 No 44 0.46 No 0 0 No -34 0.6 No 23 46.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56791440 + NM_058216 RAD51C 0 . . . 5.27 86.2 25 6.9 Yes 9 1.12 Yes 0 0 No -24 0.76 Yes 49 95.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47629456 + NM_000251 MSH2 0 . . . 2.61 78.8 37 6.85 Yes 52 0.86 Yes 0 0 No -36 0.9 Yes 41 68.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131947509 + NM_005732 RAD50 0 . . . 6.28 79.63 21 4.35 No 15 0.9 Yes 0 0 No -36 0.76 Yes 43 82.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68789016 + NM_133509 RAD51B 0 . . . 3.31 80.18 17 4.8 No 60 -4.68 No 0 0 No -16 0.73 Yes 40 41.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215648575 - NM_000465 BARD1 0 . . . 3.16 76.64 29 4.93 No 1 0.29 No 0 0 No -26 0.41 No 46 71.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69056261 + NM_133509 RAD51B 0 . . . 7.46 80.7 59 6.92 Yes 52 0.7 No 0 0 No -29 0.52 No 26 59.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510149 - NM_001040108 MLH3 0 . . . 8.5 89.51 26 4.88 No 2 0.93 Yes 0 0 No -31 0.55 No 40 78.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68911976 + NM_133509 RAD51B 0 . . . 5.45 73.09 18 4.89 No -3 0.05 No 0 0 No -17 0.48 No 44 81.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47738202 + NM_000251 MSH2 0 . . . 3.35 75.71 17 5.4 No 13 1.03 Yes 0 0 No -24 0.79 Yes 41 88.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68783611 + NM_133509 RAD51B 0 . . . 3.97 70.26 53 7.5 Yes -4 0.61 No 0 0 No -22 0.52 No 45 69.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215612797 - NM_000465 BARD1 0 . . . 8.17 88.28 27 5.57 Yes 7 0.81 Yes 0 0 No -24 0.6 No 42 62.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1216561 + NM_000455 STK11 0 . . . 2.11 70.77 36 4.79 No 66 -5.71 No 0 0 No -23 0.78 Yes 37 72.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33433774 - NM_002878 RAD51D 0 . . . 4.87 73.06 36 6.94 Yes 39 1.32 Yes 0 0 No -35 0.94 Yes 47 44.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90980724 - NM_002485 NBN 0 . . . 8.82 85.45 32 5.43 No -3 0.6 No 0 0 No -28 0.45 No 46 70.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90998760 - NM_002485 NBN 0 . . . 0.74 56.68 13 5 No 10 1.27 Yes 0 0 No -42 0.79 Yes 48 80.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215663130 - NM_000465 BARD1 0 . . . 0.43 55.37 41 7.12 Yes 47 -4.1 No 0 0 No -27 0.74 Yes 57 38.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190744299 + NM_000534 PMS1 0 . . . 4.8 77.64 30 5.57 Yes 41 -2.47 No 0 0 No -29 0.48 No 50 25.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1230302 + NM_000455 STK11 0 . . . 4.92 0 19 6.08 Yes 6 0.04 No 0 0 No -18 0.39 No 52 68.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68544876 + NM_133509 RAD51B 0 . . . 0.51 67.39 18 4.24 No 27 0.03 No 0 0 No -22 0.82 Yes 33 42.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32910281 + NM_000059 BRCA2 0 . . . 0.97 0 46 6.5 Yes 19 0.58 No 0 0 No -42 0.52 No 39 82.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21987884 - NM_000077 CDKN2A 0 . . . 1.54 67.03 15 3.85 No 4 -2.55 No 0 0 No -26 0.75 Yes 49 85.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59886610 - NM_032043 BRIP1 0 . . . 1.9 0 42 7.27 Yes 62 0.98 Yes 0 0 No -41 0.48 No 27 85.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68392361 + NM_133509 RAD51B 0 . . . 2.84 79.22 30 5.49 No 65 1.02 Yes 0 0 No -30 0.57 No 48 69.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68351152 + NM_133509 RAD51B 0 . . . 0.1 73.67 32 3.03 No 64 1.04 Yes 0 0 No -31 0.72 Yes 39 73.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68390749 + NM_133509 RAD51B 0 . . . 3.06 81.23 19 4.79 No 41 0.62 No 0 0 No -18 0.7 Yes 34 63.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23640261 - NM_024675 PALB2 0 . . . 2.11 65.27 19 5.74 Yes 9 1.03 Yes 0 0 No -27 0.52 No 41 65.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68333786 + NM_133509 RAD51B 0 . . . 0.99 0 27 5.57 Yes 43 -4.02 No 0 0 No -26 0.87 Yes 37 78.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69031051 + NM_133509 RAD51B 0 . . . 6.04 80.23 14 5 No 47 0.71 No 0 0 No -18 0.59 No 47 71.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68391249 + NM_133509 RAD51B 0 . . . 1.12 69.27 13 4.11 No 55 -4.95 No 0 0 No -22 0.86 Yes 30 25.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68416870 + NM_133509 RAD51B 0 . . . 1.2 75.11 18 4.58 No 4 0.23 No 0 0 No -21 0.66 No 50 40.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851795 - NM_032043 BRIP1 0 . . . 3.38 73.7 21 4.88 No 19 1.73 Yes 0 0 No -20 0.85 Yes 20 66.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190686891 + NM_000534 PMS1 0 . . . 2.31 66.25 13 4.8 No 60 -4.68 No 0 0 No -45 0.82 Yes 54 26.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59845246 - NM_032043 BRIP1 0 . . . 1.73 78.13 12 5.1 No 74 -4.11 No 0 0 No -19 0.51 No 52 43.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1204074 + NM_000455 STK11 0 . . . 2.13 66.58 15 5.38 No 22 1.42 Yes 0 0 No -22 0.53 No 36 91.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32935448 + NM_000059 BRCA2 0 . . . 1.16 61.59 15 3.87 No 70 -6.87 No 0 0 No -19 0.73 Yes 50 47.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68993419 + NM_133509 RAD51B 0 . . . 0.2 0 18 4.89 No 35 2.06 Yes 0 0 No -51 0.59 No 54 37.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48009184 + NM_000179 MSH6 0 . . . 0.28 0 33 5.66 Yes 0 0.75 No 0 0 No -31 0.75 Yes 38 39.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56788100 + NM_058216 RAD51C 0 . . . 0.42 68.44 20 5.56 Yes -2 0.32 No 0 0 No -26 0.25 No 51 34.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29094240 - NM_001005735 CHEK2 0 . . . 4.26 71.52 26 4.88 No 75 0.72 No 0 0 No -25 0.74 Yes 48 75.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69008630 + NM_133509 RAD51B 0 . . . 3.85 83.8 19 6.26 Yes 39 1.28 Yes 0 0 No -33 0.34 No 40 71.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68985346 + NM_133509 RAD51B 0 . . . 12.21 92.45 25 4.61 No 9 1.4 Yes 0 0 No -24 0.48 No 49 94.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68788592 + NM_004360 CDH1 0 . . . 6.84 84.58 25 5.1 No 63 -4.37 No 0 0 No -24 0.85 Yes 42 62.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68598669 + NM_133509 RAD51B 0 . . . 0.7 65.49 14 5.28 No 74 -3.71 No 0 0 No -22 0.6 No 52 26.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152362833 - NM_005431 XRCC2 0 . . . 2.04 76.91 14 4.47 No 4 0.01 No 0 0 No -40 0.58 No 54 64.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68849841 + NM_004360 CDH1 0 . . . 12.78 86.18 27 5.52 No 10 1.23 Yes 0 0 No -26 0.65 No 13 28.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108192261 + NM_000051 ATM 0 . . . 0.81 67.3 35 6.6 Yes 72 0.5 No 0 0 No -25 0.59 No 54 77.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131920300 + NM_005732 RAD50 0 . . . 2.03 72.54 13 5 No 23 0.88 Yes 0 0 No -22 0.56 No 35 67.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105194390 + NM_021930 RINT1 0 . . . 2.86 84 32 4.17 No 45 1.62 Yes 0 0 No -31 0.55 No 13 95.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68807318 + NM_004360 CDH1 0 . . . 1.41 84.22 25 5.2 No 33 1.14 Yes 0 0 No -24 0.95 Yes 50 66.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47650217 + NM_000251 MSH2 0 . . . 4.05 80.73 21 5.91 Yes 70 -4.32 No 0 0 No -20 0.44 No 37 59.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84399642 - NM_139076 FAM175A 0 . . . 1.19 55.75 14 3.87 No 75 0.4 No 0 0 No -33 0.77 Yes 47 41.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131979276 + NM_005732 RAD50 0 . . . 4.99 80.03 35 6.11 Yes 7 0.68 No 0 0 No -24 0.47 No 51 78.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68802914 + NM_004360 CDH1 0 . . . 2.34 66.73 25 5.75 Yes 65 1.6 Yes 0 0 No -29 0.69 Yes 46 90.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68753748 + NM_133509 RAD51B 0 . . . 4.9 89.41 12 5.39 No 48 0.37 No 0 0 No -46 0.52 No 24 91.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47690791 + NM_000251 MSH2 0 . . . 2.52 60.55 30 4.8 No 25 1.5 Yes 0 0 No -29 0.65 No 47 66.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190718191 + NM_000534 PMS1 0 . . . 8.86 81.99 21 5.09 No 8 0.38 No 0 0 No -20 0.7 Yes 44 53.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131980325 + NM_005732 RAD50 0 . . . 7.91 84.74 22 5.29 No 1 0.59 No 0 0 No -50 0.35 No 52 60.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68773928 + NM_133509 RAD51B 0 . . . 0.07 0 22 5.04 No 56 -4.79 No 0 0 No -25 0.59 No 42 54.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68433476 + NM_133509 RAD51B 0 . . . 6.02 81.53 17 4.45 No 2 1.13 Yes 0 0 No -16 0.44 No 50 61.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7578758 - NM_000546 TP53 0 . . . 2.61 77.69 19 5.86 Yes 67 -5.52 No 0 0 No -18 0.6 No 50 68.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47647961 + NM_000251 MSH2 0 . . . 0.41 74.04 41 9.05 Yes 55 -2.55 No 0 0 No -40 0.68 Yes 51 27.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68789214 + NM_133509 RAD51B 0 . . . 1.21 75.1 24 6.16 Yes 11 0.65 No 0 0 No -23 0.77 Yes 47 69.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59855481 - NM_032043 BRIP1 0 . . . 5.5 86.02 21 6.19 Yes 76 0.43 No 0 0 No -20 0.59 No 45 59.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47669766 + NM_000251 MSH2 0 . . . 8.13 77.2 13 5.1 No 8 0.71 No 0 0 No -22 0.83 Yes 47 38.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68358094 + NM_133509 RAD51B 0 . . . 1.95 71.32 30 5.66 Yes 36 0.71 No 0 0 No -29 0.69 Yes 19 82.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108143297 + NM_000051 ATM 0 . . . 1.06 74.1 17 4.58 No 61 0.25 No 0 0 No -22 0.68 Yes 38 80.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69046857 + NM_133509 RAD51B 0 . . . 3.86 83.98 12 4.52 No 16 0.4 No 0 0 No -22 0.43 No 42 71.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108170287 + NM_000051 ATM 0 . . . 7.33 73.83 58 6.16 Yes 23 1.62 Yes 0 0 No -26 0.89 Yes 45 80.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32935517 + NM_000059 BRCA2 0 . . . 1.41 65.46 13 4.61 No 59 -5.37 No 0 0 No -40 0.87 Yes 53 44.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68742421 + NM_133509 RAD51B 0 . . . 5.04 63.85 23 7.35 Yes 54 -0.99 No 0 0 No -22 0.88 Yes 32 72.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68404837 + NM_133509 RAD51B 0 . . . 7.77 90.62 24 4.15 No 6 0.19 No 0 0 No -23 0.8 Yes 44 95.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215608246 - NM_000465 BARD1 0 . . . 6.56 74.28 31 5.18 No 11 0.32 No 0 0 No -30 0.72 Yes 47 63.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215618579 - NM_000465 BARD1 0 . . . 3.34 0 94 9.87 Yes 27 -2.18 No 0 0 No -37 0.3 No 48 55.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105202329 + NM_021930 RINT1 0 . . . 5.3 80.79 26 6.03 Yes 70 0.66 No 0 0 No -25 0.53 No 50 63.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89668727 + NM_000314 PTEN 0 . . . 9.16 86.39 17 4.69 No 16 0.65 No 0 0 No -51 0.69 Yes 34 71.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47726111 + NM_000251 MSH2 0 . . . 2.24 80.12 12 5.39 No 7 1.16 Yes 0 0 No -26 0.39 No 51 77.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37037202 + NM_000249 MLH1 0 . . . 3.57 59.27 23 5.56 Yes 49 0.52 No 0 0 No -22 0.93 Yes 42 63.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6027474 - NM_000535 PMS2 0 . . . 1.15 71.13 9 4.92 No -3 1.2 Yes 0 0 No -23 0.35 No 61 36.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68526908 + NM_133509 RAD51B 0 . . . 3.39 78.5 19 4.5 No 7 0.98 Yes 0 0 No -18 0.34 No 50 69.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41213219 - NM_007294 BRCA1 0 . . . 0.93 76.14 20 4.58 No 34 0 No 0 0 No -19 0.55 No 51 26.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68529605 + NM_133509 RAD51B 0 . . . 9.08 90.4 18 5.38 No 74 -4.17 No 0 0 No -17 0.47 No 39 46.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131916012 + NM_005732 RAD50 0 . . . 2.94 77.23 28 5.19 No 46 0.55 No 0 0 No -27 0.91 Yes 41 76.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215670358 - NM_000465 BARD1 0 . . . 7.61 77.77 30 5.25 No 10 0.01 No 0 0 No -23 0.53 No 48 78.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108213747 + NM_000051 ATM 0 . . . 2.97 73.38 26 4.55 No 76 -5.01 No 0 0 No -25 0.35 No 46 59.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190688119 + NM_000534 PMS1 0 . . . 6.61 75.36 39 4.62 No 6 1.31 Yes 0 0 No -28 0.89 Yes 44 80.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59811424 - NM_032043 BRIP1 0 . . . 5.14 76.3 19 5 No 3 -2.35 No 0 0 No -18 0.71 Yes 35 68.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68485006 + NM_133509 RAD51B 0 . . . 1.42 70.85 14 4.47 No 41 0.71 No 0 0 No -48 0.84 Yes 45 84.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89666506 + NM_000314 PTEN 0 . . . 0.45 76.59 16 4.58 No 0 0.52 No 0 0 No -48 0.73 Yes 50 49.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108163502 + NM_000051 ATM 0 . . . 5.28 81.17 65 7.85 Yes 9 0.48 No 0 0 No -27 0.5 No 49 56.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68505171 + NM_133509 RAD51B 0 . . . 8.2 80.69 23 5.93 Yes 47 0.88 Yes 0 0 No -22 0.79 Yes 35 65.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59850640 - NM_032043 BRIP1 0 . . . 0.52 0 17 4.8 No 34 0.06 No 0 0 No -55 0.44 No 24 68.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105180628 + NM_021930 RINT1 0 . . . 4.01 69.79 21 5.5 No 17 1.42 Yes 0 0 No -20 0.6 No 41 93.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68347200 + NM_133509 RAD51B 0 . . . 6.98 82 25 5.51 No 42 -1.54 No 0 0 No -24 0.48 No 44 67.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90978700 - NM_002485 NBN 0 . . . 0.05 0 40 7.44 Yes 9 0.63 No 0 0 No -28 0.89 Yes 49 72.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152353915 - NM_005431 XRCC2 0 . . . 3.23 92.62 34 5.74 Yes 27 -1.22 No 0 0 No -33 0.76 Yes 45 58.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41202390 - NM_007294 BRCA1 0 . . . 0.01 77.34 69 9.03 Yes 11 1.63 Yes 0 0 No -23 0.37 No 47 82.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215674302 - NM_000465 BARD1 0 . . . 2.86 80.61 14 4.36 No -4 -0.39 No 0 0 No -25 0.3 No 51 35.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68850542 + NM_133509 RAD51B 0 . . . 5.38 81.73 18 4.13 No 73 0.59 No 0 0 No -25 0.59 No 54 28.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68551068 + NM_133509 RAD51B 0 . . . 4.35 75.66 18 10.63 Yes 52 1.18 Yes 0 0 No -17 0.43 No 46 68.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47734441 + NM_000251 MSH2 0 . . . 0.04 70.48 22 5.6 Yes 24 0.48 No 0 0 No -21 0.42 No 46 29.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131981154 + NM_005732 RAD50 0 . . . 6.86 82.26 27 5.2 No 14 0.8 Yes 0 0 No -26 0.75 Yes 44 84.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33440982 - NM_002878 RAD51D 0 . . . 0.11 0 23 4.56 No 1 -2.13 No 0 0 No -23 0.78 Yes 43 58.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29085012 - NM_001005735 CHEK2 0 . . . 5.93 76.53 14 4.33 No 0 0.78 Yes 0 0 No -26 0.69 Yes 49 52.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48027913 + NM_000179 MSH6 0 . . . 1.04 74.98 25 4.99 No 69 -3.01 No 0 0 No -24 0.7 Yes 44 46.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47687325 + NM_000251 MSH2 0 . . . 3.05 0 18 3.7 No 31 0.69 No 0 0 No -30 0.73 Yes 56 46.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190686559 + NM_000534 PMS1 0 . . . 1.86 61.4 28 5.69 Yes 68 -2.16 No 0 0 No -27 0.7 Yes 46 21.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59889957 - NM_032043 BRIP1 0 . . . 5.77 79.44 18 5.37 No 28 0.16 No 0 0 No -24 0.92 Yes 38 64.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68808808 + NM_004360 CDH1 0 . . . 1.98 0 52 5.81 Yes 39 1.04 Yes 0 0 No -23 0.86 Yes 47 65.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68928148 + NM_133509 RAD51B 0 . . . 3.09 76.99 27 5.08 No 58 0.16 No 0 0 No -26 0.41 No 51 55.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89636864 + NM_000314 PTEN 0 . . . 2.91 75.26 21 4.66 No 74 -1.59 No 0 0 No -20 0.73 Yes 46 75.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152343699 - NM_005431 XRCC2 0 . . . 4.66 68.39 19 4.47 No 47 0.85 Yes 0 0 No -18 0.82 Yes 42 59.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108201348 + NM_000051 ATM 0 . . . 0.04 72.64 27 4.87 No 43 0.79 Yes 0 0 No -21 0.55 No 42 91.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68335510 + NM_133509 RAD51B 0 . . . 1.05 70.05 15 4.98 No 7 2.37 Yes 0 0 No -18 0.72 Yes 38 74.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69087991 + NM_133509 RAD51B 0 . . . 8.26 98.02 33 5.04 No 56 0.35 No 0 0 No -32 0.6 No 44 42.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68921787 + NM_133509 RAD51B 0 . . . 1.83 72.29 36 5.33 No 55 -4.56 No 0 0 No -21 0.64 No 41 43.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68664030 + NM_133509 RAD51B 0 . . . 7.66 87.52 14 5.48 No 6 1.47 Yes 0 0 No -13 0.32 No 52 48.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68358127 + NM_133509 RAD51B 0 . . . 4.49 80.34 26 6.85 Yes 5 1.23 Yes 0 0 No -25 0.8 Yes 44 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47727839 + NM_000251 MSH2 0 . . . 4.67 85.66 31 5.23 No 9 1.07 Yes 0 0 No -31 0.49 No 49 93.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37052427 + NM_000249 MLH1 0 . . . 9.05 87.23 25 5.39 No 36 0.09 No 0 0 No -22 0.79 Yes 49 75.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190716942 + NM_000534 PMS1 0 . . . 1.11 75.91 46 6.54 Yes 45 0.3 No 0 0 No -39 0.61 No 52 50.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37036700 + NM_000249 MLH1 0 . . . 4.21 70.85 25 4.5 No 23 1.59 Yes 0 0 No -24 0.83 Yes 35 63.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215603074 - NM_000465 BARD1 0 . . . 1.61 73.85 27 4.98 No 63 0.22 No 0 0 No -26 0.85 Yes 50 51.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90950335 - NM_002485 NBN 0 . . . 1.7 65.93 21 5.83 Yes 62 -6.04 No 0 0 No -20 0.69 Yes 46 85.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68786090 + NM_004360 CDH1 0 . . . 6.24 82.31 23 5.39 No 58 1.15 Yes 0 0 No -22 0.67 Yes 55 55.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68614845 + NM_133509 RAD51B 0 . . . 2.12 75.25 14 6.35 Yes 25 0.83 Yes 0 0 No -28 0.46 No 33 95.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90959456 - NM_002485 NBN 0 . . . 2.31 80.87 9 4.69 No 47 1.07 Yes 0 0 No -18 0.27 No 47 75.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190737091 + NM_000534 PMS1 0 . . . 0.59 65.53 25 5.57 Yes 61 -5.26 No 0 0 No -24 0.8 Yes 50 80.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68727977 + NM_133509 RAD51B 0 . . . 5.46 74.96 27 5.65 Yes 32 0.4 No 0 0 No -26 0.73 Yes 42 82.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59823310 - NM_032043 BRIP1 0 . . . 3.28 68.9 15 3.88 No 75 -5.83 No 0 0 No -62 0.23 No 48 53.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68325702 + NM_133509 RAD51B 0 . . . 2.47 80.64 19 4.69 No 74 0.39 No 0 0 No -57 0.3 No 48 82.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89714569 + NM_000314 PTEN 0 . . . 3.42 77.22 25 6.16 Yes 64 -3.36 No 0 0 No -24 0.95 Yes 47 85.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68953186 + NM_133509 RAD51B 0 . . . 2.91 72.5 17 6.08 Yes 35 0.59 No 0 0 No -16 0.7 Yes 48 35.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190687281 + NM_000534 PMS1 0 . . . 4.33 75.68 23 4.61 No 42 0.44 No 0 0 No -22 0.65 No 42 84.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32949816 + NM_000059 BRCA2 0 . . . 0.78 84.22 31 6.42 Yes 33 0.9 Yes 0 0 No -30 0.78 Yes 50 50.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59896463 - NM_032043 BRIP1 0 . . . 2.2 65.88 11 4.12 No 59 1.48 Yes 0 0 No -36 0.96 Yes 47 79.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68591552 + NM_133509 RAD51B 0 . . . 1.12 76.91 29 7.35 Yes 50 0.63 No 0 0 No -28 0.86 Yes 39 50.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108146349 + NM_000051 ATM 0 . . . 5.17 74.14 21 5.81 Yes 36 0.93 Yes 0 0 No -20 0.74 Yes 39 86.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69010748 + NM_133509 RAD51B 0 . . . 3.48 75.64 14 5.34 No 73 -6.14 No 0 0 No -25 0.68 Yes 44 67.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190688479 + NM_000534 PMS1 0 . . . 1.44 64.95 14 5.05 No 51 0.54 No 0 0 No -24 0.89 Yes 42 77.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68766479 + NM_133509 RAD51B 0 . . . 1.16 0 24 4.73 No 2 1.29 Yes 0 0 No -23 0.82 Yes 42 49.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68529396 + NM_133509 RAD51B 0 . . . 1.27 70.63 16 5.07 No 52 0.39 No 0 0 No -20 0.69 Yes 52 44.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89650913 + NM_000314 PTEN 0 . . . 6.62 79.87 39 6.67 Yes 66 0.14 No 0 0 No -24 0.88 Yes 46 56.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47733931 + NM_000251 MSH2 0 . . . 1.21 70.06 24 4.67 No 28 -0.98 No 0 0 No -23 0.69 Yes 50 46.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68898996 + NM_133509 RAD51B 0 . . . 1.76 80.41 22 4.77 No 58 0 No 0 0 No -22 0.67 Yes 50 63.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52436535 - NM_004656 BAP1 0 . . . 0.88 75.96 23 7.09 Yes 30 0.84 Yes 0 0 No -28 0.54 No 43 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59874554 - NM_032043 BRIP1 0 . . . 7.52 78.38 14 4.62 No 38 0.02 No 0 0 No -25 0.45 No 49 57.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69001231 + NM_133509 RAD51B 0 . . . 8.63 91.94 25 4.9 No 59 -4.21 No 0 0 No -21 0.6 No 44 76.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68840493 + NM_004360 CDH1 0 . . . 5.12 89.4 59 7.6 Yes 59 1.03 Yes 0 0 No -30 0.6 No 51 60.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68380542 + NM_133509 RAD51B 0 . . . 1.42 0 17 3.96 No 48 0.58 No 0 0 No -26 0.62 No 46 76.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68446162 + NM_133509 RAD51B 0 . . . 3.86 70.44 11 5.2 No 38 0.92 Yes 0 0 No -24 0.53 No 55 60.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68632531 + NM_133509 RAD51B 0 . . . 1.36 76.08 20 4.78 No 64 0.92 Yes 0 0 No -19 0.73 Yes 36 60.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47761052 + NM_000251 MSH2 0 . . . 4.07 71.16 16 4.33 No 74 0.33 No 0 0 No -23 0.48 No 46 61.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108101846 + NM_000051 ATM 0 . . . 4.77 82.67 15 4.57 No 50 0.69 No 0 0 No -19 0.5 No 42 51.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32889128 + NM_000059 BRCA2 0 . . . 3.01 72.51 20 4.45 No 10 0.26 No 0 0 No -19 0.8 Yes 48 44.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68977583 + NM_133509 RAD51B 0 . . . 4.53 75.73 16 4.69 No 28 -1.87 No 0 0 No -59 0.59 No 49 28.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47664685 + NM_000251 MSH2 0 . . . 3.68 77.03 20 4.36 No 17 0.38 No 0 0 No -19 0.91 Yes 38 75.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68957826 + NM_133509 RAD51B 0 . . . 6.07 79.35 20 5.54 No 76 -2.36 No 0 0 No -29 0.62 No 39 79.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108203808 + NM_000051 ATM 0 . . . 7.33 76.65 29 6.32 Yes 37 1.04 Yes 0 0 No -28 0.82 Yes 43 72.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69107555 + NM_133509 RAD51B 0 . . . 6.66 82.08 26 6.56 Yes 35 0.21 No 0 0 No -25 0.91 Yes 46 77.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89648190 + NM_000314 PTEN 0 . . . 6.43 87.06 35 6 Yes 3 0.03 No 0 0 No -61 0.26 No 43 67.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68849710 + NM_133509 RAD51B 0 . . . 6.53 78.89 24 4.34 No 25 0.83 Yes 0 0 No -23 0.57 No 45 76.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29090420 - NM_001005735 CHEK2 0 . . . 1.09 67.58 26 4.89 No 41 1.51 Yes 0 0 No -25 0.79 Yes 17 65.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68576747 + NM_133509 RAD51B 0 . . . 0.53 0 19 4.05 No 28 -3.62 No 0 0 No -44 0.82 Yes 51 46.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68947747 + NM_133509 RAD51B 0 . . . 1.62 66.96 16 4.82 No 52 1.21 Yes 0 0 No -22 0.8 Yes 44 44.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131967780 + NM_005732 RAD50 0 . . . 1.04 71.15 17 5.06 No 31 1.12 Yes 0 0 No -26 0.7 Yes 33 70.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59867660 - NM_032043 BRIP1 0 . . . 0.93 65.45 31 5.83 Yes 23 1.42 Yes 0 0 No -30 0.84 Yes 40 53.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108222580 + NM_000051 ATM 0 . . . 5.4 73.7 104 9.05 Yes 37 0.23 No 0 0 No -41 0.39 No 49 56.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68321563 + NM_133509 RAD51B 0 . . . 2.55 68.39 37 7.14 Yes 58 0.47 No 0 0 No -25 0.77 Yes 46 25.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68384217 + NM_133509 RAD51B 0 . . . 1.09 65.94 21 4.7 No 65 -4.38 No 0 0 No -23 0.78 Yes 43 30.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7580157 - NM_000546 TP53 0 . . . 4.66 81.22 14 5.13 No 6 1.48 Yes 0 0 No -27 0.85 Yes 52 81.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89642742 + NM_000314 PTEN 0 . . . 3.09 78.35 18 4.9 No 33 0.19 No 0 0 No -29 0.46 No 50 74.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68485676 + NM_133509 RAD51B 0 . . . 2.79 63.45 10 6 Yes 74 1.37 Yes 0 0 No -9 0.41 No 48 53.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47684985 + NM_000251 MSH2 0 . . . 2.01 80.65 26 4.04 No 3 1.13 Yes 0 0 No -25 0.59 No 51 62.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68974216 + NM_133509 RAD51B 0 . . . 3.69 75.96 28 7.28 Yes 56 0.56 No 0 0 No -27 0.91 Yes 55 35.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69077210 + NM_133509 RAD51B 0 . . . 6.82 83.41 41 3.78 No 31 -2.22 No 0 0 No -21 0.79 Yes 40 63.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152347452 - NM_005431 XRCC2 0 . . . 2.62 86.18 18 4.58 No -4 0.51 No 0 0 No -22 0.56 No 54 32.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69136904 + NM_133509 RAD51B 0 . . . 0.61 60.91 16 4.69 No 74 1.13 Yes 0 0 No -24 0.65 No 12 40.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215659433 - NM_000465 BARD1 0 . . . 3.21 75.11 29 5.99 Yes 6 0.83 Yes 0 0 No -28 0.55 No 43 79.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68475568 + NM_133509 RAD51B 0 . . . 4.78 73.29 14 5 No 20 1.84 Yes 0 0 No -25 0.43 No 38 44.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59860180 - NM_032043 BRIP1 0 . . . 2.94 0 33 5.83 Yes 30 2.23 Yes 0 0 No -32 0.59 No 28 94.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190720772 + NM_000534 PMS1 0 . . . 9.23 78.97 22 5.19 No 17 1.46 Yes 0 0 No -26 0.63 No 41 90.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41005544 + NM_001164269 RAD51 0 . . . 1.37 68.95 17 6.85 Yes 16 1.11 Yes 0 0 No -23 0.57 No 42 94.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75508224 - NM_001040108 MLH3 0 . . . 4.23 82.97 41 7.92 Yes 30 0.01 No 0 0 No -30 0.81 Yes 43 33.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68792881 + NM_004360 CDH1 0 . . . 8.37 87.44 24 4.7 No 5 1.27 Yes 0 0 No -23 0.55 No 53 84.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21992950 - NM_000077 CDKN2A 0 . . . 1.18 66.25 27 4.85 No 62 0.53 No 0 0 No -23 0.68 Yes 37 72.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32901859 + NM_000059 BRCA2 0 . . . 2.04 63.12 29 4.36 No 38 -3.05 No 0 0 No -28 0.69 Yes 44 38.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33441507 - NM_002878 RAD51D 0 . . . 1.47 71.67 24 5.96 Yes 42 0.47 No 0 0 No -24 0.75 Yes 16 93.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68515613 + NM_133509 RAD51B 0 . . . 0.17 73.95 21 5.04 No 48 0.86 Yes 0 0 No -20 0.58 No 37 33.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89630062 + NM_000314 PTEN 0 . . . 1.35 71.42 19 5 No 55 1.16 Yes 0 0 No -21 0.53 No 51 49.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152347424 - NM_005431 XRCC2 0 . . . 7.27 80.6 31 5.18 No 8 0.99 Yes 0 0 No -19 0.53 No 50 86.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68860313 + NM_004360 CDH1 0 . . . 2.95 70.85 23 5.05 No 13 0.87 Yes 0 0 No -27 0.56 No 40 74.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152375014 - NM_005431 XRCC2 0 . . . 2.16 83.82 12 4.24 No 44 0.42 No 0 0 No -28 0.64 No 43 83.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68864423 + NM_004360 CDH1 0 . . . 4.22 76.61 35 6.16 Yes 54 -4.11 No 0 0 No -34 0.84 Yes 47 52.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89673530 + NM_000314 PTEN 0 . . . 9.56 87.21 15 4.61 No 15 0.18 No 0 0 No -27 0.66 No 43 97.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68902492 + NM_133509 RAD51B 0 . . . 1.43 67.43 16 5.17 No 44 1 Yes 0 0 No -20 0.63 No 35 95.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68859446 + NM_133509 RAD51B 0 . . . 2.61 79.23 35 5.92 Yes 11 0.36 No 0 0 No -28 0.83 Yes 46 53.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997323 + NM_001164269 RAD51 0 . . . 7.04 81.53 11 4.12 No 17 1.01 Yes 0 0 No -25 0.56 No 41 60.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68657244 + NM_133509 RAD51B 0 . . . 7.78 83.85 31 6.55 Yes 5 1.59 Yes 0 0 No -24 0.55 No 44 61.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45807472 - NM_001048171 MUTYH 0 . . . 0.68 67.91 27 5.29 No 71 -5.99 No 0 0 No -26 0.74 Yes 55 34.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33442788 - NM_002878 RAD51D 0 . . . 0.26 82.97 21 5.2 No 33 1.09 Yes 0 0 No -44 0.4 No 50 41.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56796752 + NM_058216 RAD51C 0 . . . 2.08 69.37 24 3.77 No 68 1.06 Yes 0 0 No -26 0.87 Yes 57 83.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1204638 + NM_000455 STK11 0 . . . 0.57 74.49 21 5.98 Yes 53 1.09 Yes 0 0 No -19 0.68 Yes 51 70.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108137511 + NM_000051 ATM 0 . . . 6.72 73.59 19 3.97 No 2 0.26 No 0 0 No -23 0.89 Yes 42 97.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41013261 + NM_001164269 RAD51 0 . . . 2.44 69.29 31 5.3 No 31 -2.27 No 0 0 No -30 0.7 Yes 42 51.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45806734 - NM_001048171 MUTYH 0 . . . 0.6 60.66 17 6.71 Yes 6 0.6 No 0 0 No -39 0.33 No 52 75.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104175877 - NM_001100119 XRCC3 0 . . . 6.12 78.47 34 5.84 Yes 57 0.72 No 0 0 No -22 0.77 Yes 36 75.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69052648 + NM_133509 RAD51B 0 . . . 3 67.93 36 6.24 Yes 73 -5.05 No 0 0 No -35 0.58 No 39 87.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215658730 - NM_000465 BARD1 0 . . . 3.37 68.34 22 4.79 No 18 0.6 No 0 0 No -19 0.84 Yes 40 91.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84394356 - NM_139076 FAM175A 0 . . . 5.4 90.8 22 4.18 No 9 0.91 Yes 0 0 No -28 0.38 No 49 73.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94208963 - NM_005591 MRE11 0 . . . 4.57 72.62 28 5.42 No -2 0.72 No 0 0 No -31 0.54 No 46 49.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23647236 - NM_024675 PALB2 0 . . . 1.53 0 29 5.74 Yes 43 0.86 Yes 0 0 No -28 0.91 Yes 31 73.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215639972 - NM_000465 BARD1 0 . . . 1.25 73.8 14 4.9 No 7 1.27 Yes 0 0 No -43 0.53 No 51 78.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68951585 + NM_133509 RAD51B 0 . . . 5.64 70.48 42 5.83 Yes 22 0.78 Yes 0 0 No -36 0.51 No 44 58.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47677850 + NM_000251 MSH2 0 . . . 1.81 65.69 31 5.6 Yes 48 -3.7 No 0 0 No -30 0.79 Yes 43 88.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59874339 - NM_032043 BRIP1 0 . . . 2.13 73.25 27 7 Yes 45 1.2 Yes 0 0 No -26 0.9 Yes 13 74.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68624943 + NM_133509 RAD51B 0 . . . 0.67 62.81 19 7.07 Yes 51 -3.22 No 0 0 No -18 0.48 No 59 18.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68859137 + NM_133509 RAD51B 0 . . . 6.09 74.03 33 5.11 No -2 1.37 Yes 0 0 No -32 0.45 No 45 69.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47757716 + NM_000251 MSH2 0 . . . 2.99 57.98 22 5.45 No 35 1.3 Yes 0 0 No -28 0.71 Yes 46 36.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68566081 + NM_133509 RAD51B 0 . . . 3.84 61.77 19 5.06 No 47 0.82 Yes 0 0 No -18 0.53 No 38 52.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68301547 + NM_133509 RAD51B 0 . . . 4.83 73.28 22 5.29 No 4 0.95 Yes 0 0 No -21 0.71 Yes 43 67.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6037977 - NM_000535 PMS2 0 . . . 0.82 77.18 20 4.39 No 44 0.36 No 0 0 No -19 0.83 Yes 54 76.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68941082 + NM_133509 RAD51B 0 . . . 2.17 0 23 5.59 Yes 15 0.75 No 0 0 No -31 0.65 No 36 80.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41242156 - NM_007294 BRCA1 0 . . . 2.45 71.06 33 5.91 Yes 68 -2.85 No 0 0 No -32 0.76 Yes 33 55.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190655996 + NM_000534 PMS1 0 . . . 2.36 74.46 10 3.87 No 8 1.26 Yes 0 0 No -32 0.47 No 50 59.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59840932 - NM_032043 BRIP1 0 . . . 3.52 68.78 20 5.1 No 73 -4.27 No 0 0 No -19 0.54 No 35 87.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56774319 + NM_058216 RAD51C 0 . . . 0.08 64.91 35 7.26 Yes 72 0.82 Yes 0 0 No -34 0.77 Yes 44 30.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190743529 + NM_000534 PMS1 0 . . . 7.2 74.06 33 6 Yes 58 0.78 Yes 0 0 No -33 0.58 No 46 67.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68364802 + NM_133509 RAD51B 0 . . . 4.63 73.72 22 6.16 Yes 43 -2.55 No 0 0 No -24 0.63 No 39 62.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68821847 + NM_133509 RAD51B 0 . . . 2.12 75.13 27 4.75 No 64 0.32 No 0 0 No -26 0.76 Yes 49 67.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84392823 - NM_139076 FAM175A 0 . . . 4.59 82.1 31 6.78 Yes 32 0.68 No 0 0 No -30 0.71 Yes 51 90.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47719862 + NM_000251 MSH2 0 . . . 3.16 66.33 41 4.48 No 43 0.8 Yes 0 0 No -27 0.79 Yes 57 19.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108212979 + NM_000051 ATM 0 . . . 3.77 91.55 17 4.3 No 11 0.51 No 0 0 No -16 0.53 No 47 96.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215632451 - NM_000465 BARD1 0 . . . 4.84 80.94 16 5.56 Yes 12 2.18 Yes 0 0 No -33 0.22 No 38 55.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68383101 + NM_133509 RAD51B 0 . . . 0.23 76.84 12 4.51 No 60 1.23 Yes 0 0 No -22 0.49 No 32 58.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37051670 + NM_000249 MLH1 0 . . . 6.56 90.92 22 5.1 No 3 0.75 No 0 0 No -22 0.4 No 43 20.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68817513 + NM_004360 CDH1 0 . . . 2.69 0 26 6.15 Yes 32 1.32 Yes 0 0 No -24 0.62 No 47 64.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215609988 - NM_000465 BARD1 0 . . . 5.3 80.35 22 5.89 Yes 75 0.86 Yes 0 0 No -21 0.77 Yes 38 79.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48017976 + NM_000179 MSH6 0 . . . 1.52 71.23 34 10.68 Yes 35 0.92 Yes 0 0 No -33 0.73 Yes 35 50.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47790931 + NM_000251 MSH2 0 . . . 6.02 80.57 46 6.91 Yes 61 0.78 Yes 0 0 No -21 0.79 Yes 44 61.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69071773 + NM_133509 RAD51B 0 . . . 5.8 82.35 17 6.11 Yes 62 -3.92 No 0 0 No -24 0.67 Yes 53 77.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215591999 - NM_000465 BARD1 0 . . . 1.1 68.55 94 5.89 Yes -3 0.09 No 0 0 No -25 0.79 Yes 50 47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131965917 + NM_005732 RAD50 0 . . . 5.2 85.02 24 4.78 No 5 1.23 Yes 0 0 No -23 0.86 Yes 53 74.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75502141 - NM_001040108 MLH3 0 . . . 3.3 68.95 40 8.17 Yes 16 0.96 Yes 0 0 No -39 0.55 No 42 89.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94211202 - NM_005591 MRE11 0 . . . 8.7 81.64 20 4.89 No 30 1.49 Yes 0 0 No -19 0.83 Yes 27 70.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68796427 + NM_004360 CDH1 0 . . . 4.34 72.2 30 6.02 Yes 19 1.1 Yes 0 0 No -18 0.61 No 43 90.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32930897 + NM_000059 BRCA2 0 . . . 0.12 0 33 6.08 Yes 54 -3.46 No 0 0 No -32 0.37 No 45 65.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68991130 + NM_133509 RAD51B 0 . . . 3.86 65.72 22 7.26 Yes 4 0.83 Yes 0 0 No -21 0.83 Yes 54 38.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59824927 - NM_032043 BRIP1 0 . . . 7.27 87.12 19 5.48 No 39 1.43 Yes 0 0 No -23 0.59 No 44 85.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59918073 - NM_032043 BRIP1 0 . . . 5.35 77.95 11 5 No 56 -0.81 No 0 0 No -27 0.35 No 43 84.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215650339 - NM_000465 BARD1 0 . . . 7.54 79.31 36 7.48 Yes 64 1.23 Yes 0 0 No -29 0.33 No 35 62.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41000806 + NM_001164269 RAD51 0 . . . 8.05 86.76 23 7.95 Yes 44 0.79 Yes 0 0 No -22 0.71 Yes 38 89.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94172009 - NM_005591 MRE11 0 . . . 7.05 79.93 18 4.36 No 1 0.25 No 0 0 No -17 0.91 Yes 45 70.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6013024 - NM_000535 PMS2 0 . . . 0.25 0 24 4.71 No 9 -1.69 No 0 0 No -46 0.49 No 38 67.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68511270 + NM_133509 RAD51B 0 . . . 8.36 77.19 28 5.67 Yes 72 1.43 Yes 0 0 No -27 0.7 Yes 42 83.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89730553 + NM_000314 PTEN 0 . . . 8.98 79.15 19 5.54 No 17 1.04 Yes 0 0 No -18 0.53 No 47 75.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68460805 + NM_133509 RAD51B 0 . . . 6.15 98.63 60 6.07 Yes 33 0.53 No 0 0 No -33 0.4 No 49 92.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68930203 + NM_133509 RAD51B 0 . . . 1.32 68.4 28 7.6 Yes 73 -5.51 No 0 0 No -27 0.43 No 46 58.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32964190 + NM_000059 BRCA2 0 . . . 6.98 78.73 17 5.33 No 76 1.32 Yes 0 0 No -25 0.72 Yes 39 42.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59806449 - NM_032043 BRIP1 0 . . . 2.37 83.37 40 6.56 Yes 31 0.95 Yes 0 0 No -36 0.77 Yes 42 57.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68810536 + NM_004360 CDH1 0 . . . 4.16 74.52 46 6.99 Yes 19 0.87 Yes 0 0 No -23 0.72 Yes 39 85.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105176442 + NM_021930 RINT1 0 . . . 5.9 79.01 48 6.97 Yes 1 0.85 Yes 0 0 No -25 0.88 Yes 41 87.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68768334 + NM_133509 RAD51B 0 . . . 2.3 84.41 19 5.26 No 35 0.7 No 0 0 No -24 0.67 Yes 23 79.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68810696 + NM_133509 RAD51B 0 . . . 0.11 0 25 6.71 Yes 63 -5.76 No 0 0 No -24 0.83 Yes 45 22.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68392174 + NM_133509 RAD51B 0 . . . 2.24 80.12 20 5.56 No 7 1.16 Yes 0 0 No -24 0.79 Yes 51 80.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68843946 + NM_004360 CDH1 0 . . . 1.02 72.27 17 3.85 No 48 0.52 No 0 0 No -21 0.79 Yes 44 91.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68470799 + NM_133509 RAD51B 0 . . . 0.13 76.94 14 4.47 No 74 0.91 Yes 0 0 No -19 0.31 No 43 91.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68791687 + NM_133509 RAD51B 0 . . . 4.33 0 58 6.42 Yes 0 0.2 No 0 0 No -29 0.86 Yes 30 83.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32948704 + NM_000059 BRCA2 0 . . . 4.11 64.62 20 5.26 No 27 1.3 Yes 0 0 No -23 0.44 No 44 75.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59799711 - NM_032043 BRIP1 0 . . . 3.92 64.23 22 6.16 Yes 40 1.02 Yes 0 0 No -21 0.95 Yes 27 67.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47799514 + NM_000251 MSH2 0 . . . 8.16 68.08 42 6.48 Yes 16 1.22 Yes 0 0 No -29 0.33 No 42 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68325149 + NM_133509 RAD51B 0 . . . 3.72 73.8 15 3.87 No 33 0.78 Yes 0 0 No -31 0.8 Yes 25 65.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190721520 + NM_000534 PMS1 0 . . . 1.29 75.98 13 4.87 No 17 2.11 Yes 0 0 No -21 0.53 No 32 87.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68685082 + NM_133509 RAD51B 0 . . . 2.08 72.77 26 5.19 No 76 0.59 No 0 0 No -25 0.76 Yes 46 87.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47714943 + NM_000251 MSH2 0 . . . 2.54 71.63 14 3.65 No 69 1.18 Yes 0 0 No -27 0.59 No 35 87.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69050280 + NM_133509 RAD51B 0 . . . 2.06 74.52 59 7.7 Yes 51 0.53 No 0 0 No -25 0.68 Yes 45 47.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108187779 + NM_000051 ATM 0 . . . 2.22 83.05 13 5.27 No 21 1.62 Yes 0 0 No -21 0.3 No 50 90.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68612918 + NM_133509 RAD51B 0 . . . 1.94 67.1 52 8.05 Yes 53 -5 No 0 0 No -29 0.76 Yes 52 62.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29106163 - NM_001005735 CHEK2 0 . . . 1.46 77.68 34 7.63 Yes 15 1.47 Yes 0 0 No -33 0.68 Yes 43 74.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89707573 + NM_000314 PTEN 0 . . . 0.42 87.86 29 5.46 No 13 0.23 No 0 0 No -28 0.86 Yes 45 77.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89671859 + NM_000314 PTEN 0 . . . 3.6 85.02 36 6.03 Yes 4 1.05 Yes 0 0 No -25 0.53 No 54 72.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23615766 - NM_024675 PALB2 0 . . . 4.19 84.34 22 5.29 No 17 0.94 Yes 0 0 No -21 0.83 Yes 47 67.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59886730 - NM_032043 BRIP1 0 . . . 2.78 74.56 9 5.39 No 25 1.01 Yes 0 0 No -22 0.82 Yes 51 53.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94206434 - NM_005591 MRE11 0 . . . 5.55 79.85 21 4.47 No 5 0.12 No 0 0 No -20 0.96 Yes 42 75.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108124231 + NM_000051 ATM 0 . . . 1.06 78.31 47 7.14 Yes 74 1.42 Yes 0 0 No -35 0.58 No 49 42.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68326314 + NM_133509 RAD51B 0 . . . 1.91 66.17 21 4.9 No 59 1.28 Yes 0 0 No -26 0.75 Yes 49 45.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47704344 + NM_000251 MSH2 0 . . . 4.57 77.82 25 5.57 Yes 27 1.53 Yes 0 0 No -24 0.73 Yes 55 38.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68437629 + NM_133509 RAD51B 0 . . . 6.07 76.62 13 5.78 Yes 41 0.81 Yes 0 0 No -28 0.77 Yes 43 88.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68619337 + NM_133509 RAD51B 0 . . . 8.53 82 21 4.97 No 10 1.25 Yes 0 0 No -20 0.75 Yes 48 78.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6045373 - NM_000535 PMS2 0 . . . 3.11 71.21 48 8.18 Yes 43 0.46 No 0 0 No -31 0.56 No 50 64.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69099746 + NM_133509 RAD51B 0 . . . 4.15 82.13 23 4.18 No 76 2.38 Yes 0 0 No -22 0.89 Yes 11 19.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41220757 - NM_007294 BRCA1 0 . . . 0.68 74.48 12 4.21 No 52 1.63 Yes 0 0 No -54 0.37 No 43 55.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47643942 + NM_000251 MSH2 0 . . . 2.67 72.73 24 7.97 Yes 64 -6.07 No 0 0 No -32 0.47 No 49 40.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69057921 + NM_133509 RAD51B 0 . . . 0.3 0 9 5.29 No 68 0.25 No 0 0 No -21 0.88 Yes 50 45.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47710253 + NM_000251 MSH2 0 . . . 0.05 66.18 23 3.5 No 16 0.8 Yes 0 0 No -22 0.39 No 38 72.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215649208 - NM_000465 BARD1 0 . . . 6.62 77.83 24 5.29 No 66 -4.73 No 0 0 No -23 0.86 Yes 46 60.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48016183 + NM_000179 MSH6 0 . . . 4.1 93.08 35 6.78 Yes 33 1.08 Yes 0 0 No -23 0.85 Yes 50 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75492239 - NM_001040108 MLH3 0 . . . 2.27 66.96 39 5.65 Yes 56 -4.47 No 0 0 No -25 0.84 Yes 43 51.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68556474 + NM_133509 RAD51B 0 . . . 2.97 64.54 21 5.2 No 49 0.8 Yes 0 0 No -20 0.77 Yes 38 82.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215594898 - NM_000465 BARD1 0 . . . 5.64 77.51 20 7.86 Yes 29 0.86 Yes 0 0 No -25 0.56 No 42 55.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41196745 - NM_007294 BRCA1 0 . . . 2.95 73.41 22 5.74 Yes 30 0.39 No 0 0 No -26 0.37 No 50 74.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59791030 - NM_032043 BRIP1 0 . . . 2.22 71.2 89 6.89 Yes 37 0.62 No 0 0 No -29 0.86 Yes 52 38.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68487354 + NM_133509 RAD51B 0 . . . 3.44 73.7 36 6.03 Yes 59 1.09 Yes 0 0 No -35 0.37 No 37 46.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152359587 - NM_005431 XRCC2 0 . . . 1.83 73.68 65 8.33 Yes 37 1.15 Yes 0 0 No -29 0.35 No 39 92.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6045401 - NM_000535 PMS2 0 . . . 4.75 80.88 37 6.16 Yes 15 0.46 No 0 0 No -36 0.72 Yes 43 55.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68958731 + NM_133509 RAD51B 0 . . . 6.33 82.47 95 7.62 Yes 17 1.3 Yes 0 0 No -23 0.72 Yes 41 94.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29124043 - NM_001005735 CHEK2 0 . . . 2.49 84.34 30 5.33 No 44 1.48 Yes 0 0 No -32 0.41 No 50 84.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6038520 - NM_000535 PMS2 0 . . . 0.78 84.22 29 5.48 No 33 1.12 Yes 0 0 No -28 0.94 Yes 50 51.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1209468 + NM_000455 STK11 0 . . . 2.01 74.68 32 6.01 Yes 53 0.63 No 0 0 No -23 0.6 No 36 79.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190704478 + NM_000534 PMS1 0 . . . 1.94 0 24 5.92 Yes 25 0.3 No 0 0 No -56 0.6 No 33 60.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32948451 + NM_000059 BRCA2 0 . . . 6.12 74.09 14 4.99 No 25 1.67 Yes 0 0 No -20 0.48 No 33 90.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108101613 + NM_000051 ATM 0 . . . 5.24 80.12 25 5.47 No 7 1.16 Yes 0 0 No -24 0.64 No 51 83.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68622905 + NM_133509 RAD51B 0 . . . 8.44 94.53 18 3.41 No 75 1.25 Yes 0 0 No -21 0.96 Yes 44 85.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68831733 + NM_004360 CDH1 0 . . . 0.06 74.02 19 5 No 38 0.39 No 0 0 No -18 0.57 No 54 83.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94224806 - NM_005591 MRE11 0 . . . 5.04 88.23 17 5.57 Yes 20 0.36 No 0 0 No -16 0.7 Yes 52 33.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68671926 + NM_133509 RAD51B 0 . . . 1.11 0 26 5.66 Yes 53 0.94 Yes 0 0 No -25 0.52 No 48 73.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29125504 - NM_001005735 CHEK2 0 . . . 1.37 83.33 24 4.76 No 42 1.36 Yes 0 0 No -38 0.54 No 16 91.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190672264 + NM_000534 PMS1 0 . . . 3.02 69.52 17 5.47 No 14 0.4 No 0 0 No -29 0.44 No 44 87.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90971857 - NM_002485 NBN 0 . . . 0.03 0 19 4.47 No 57 1.26 Yes 0 0 No -18 0.79 Yes 26 45.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68418835 + NM_133509 RAD51B 0 . . . 3.83 73.99 30 5.83 Yes 25 1.19 Yes 0 0 No -27 0.75 Yes 33 87.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89655975 + NM_000314 PTEN 0 . . . 0.8 80.97 25 2.8 No 32 1.28 Yes 0 0 No -21 0.64 No 23 74.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1225192 + NM_000455 STK11 0 . . . 7.96 86.67 16 4 No 16 1.21 Yes 0 0 No -30 0.6 No 42 82.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47643341 + NM_000251 MSH2 0 . . . 1.45 75.41 29 5.11 No 50 -2.89 No 0 0 No -23 0.69 Yes 43 37.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48015871 + NM_000179 MSH6 0 . . . 2.06 68.84 20 5.1 No 34 -1.36 No 0 0 No -41 0.81 Yes 48 72.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45800951 - NM_001048171 MUTYH 0 . . . 3.92 74.9 31 6.34 Yes 12 0.69 No 0 0 No -30 0.76 Yes 36 66.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108131399 + NM_000051 ATM 0 . . . 1.48 78.38 24 5.1 No 71 -6.94 No 0 0 No -23 0.78 Yes 52 52.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68488737 + NM_133509 RAD51B 0 . . . 3.57 69.65 24 4.42 No 1 0.4 No 0 0 No -23 0.88 Yes 39 65.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108110384 + NM_000051 ATM 0 . . . 2.94 75.54 20 4.9 No 24 1.04 Yes 0 0 No -19 0.82 Yes 48 82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89728901 + NM_000314 PTEN 0 . . . 3.25 75.12 15 4.58 No 39 -4.61 No 0 0 No -37 0.48 No 42 56.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21966527 - NM_000077 CDKN2A 0 . . . 6.75 76.71 27 4.01 No 61 0.81 Yes 0 0 No -26 0.82 Yes 26 65.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108093169 + NM_000051 ATM 0 . . . 4.69 81.16 22 5.24 No 75 -2.17 No 0 0 No -21 0.82 Yes 46 44.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69142908 + NM_133509 RAD51B 0 . . . 5.49 78.1 11 5.83 Yes 56 0.7 No 0 0 No -23 0.44 No 52 73.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37045169 + NM_000249 MLH1 0 . . . 1.53 59.13 30 5.96 Yes 75 0.7 No 0 0 No -29 0.8 Yes 46 66.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68375918 + NM_133509 RAD51B 0 . . . 3.2 78.44 29 5.57 Yes 43 0.77 No 0 0 No -28 0.4 No 46 68.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68399957 + NM_133509 RAD51B 0 . . . 0.98 69.21 12 4.24 No 41 1.29 Yes 0 0 No -30 0.69 Yes 45 83.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89700715 + NM_000314 PTEN 0 . . . 4.83 76.73 31 5.69 Yes 20 0.76 No 0 0 No -30 0.68 Yes 46 69.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68695591 + NM_133509 RAD51B 0 . . . 3.49 0 34 5.97 Yes 53 0.99 Yes 0 0 No -18 0.84 Yes 46 48.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68920486 + NM_133509 RAD51B 0 . . . 3.11 83.99 30 5 No -3 0.61 No 0 0 No -25 0.85 Yes 40 46.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68843983 + NM_133509 RAD51B 0 . . . 2.17 76.35 30 6.48 Yes 76 -6.23 No 0 0 No -29 0.81 Yes 47 36.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47772038 + NM_000251 MSH2 0 . . . 1.35 72.03 35 8.3 Yes 48 -4.27 No 0 0 No -34 0.76 Yes 38 38.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68713667 + NM_133509 RAD51B 0 . . . 1.51 74.26 42 6.78 Yes 53 -5.06 No 0 0 No -30 0.92 Yes 40 61.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68799290 + NM_133509 RAD51B 0 . . . 2.91 65.74 28 5.01 No 73 -2.6 No 0 0 No -23 0.93 Yes 42 58.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190650143 + NM_000534 PMS1 0 . . . 9.25 88.21 12 4.12 No 42 1.37 Yes 0 0 No -38 0.44 No 46 91.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47667342 + NM_000251 MSH2 0 . . . 4.13 84.41 21 4.97 No 23 1.5 Yes 0 0 No -25 0.62 No 35 85.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33435620 - NM_002878 RAD51D 0 . . . 5.77 72.36 19 4.99 No 65 -5.44 No 0 0 No -18 0.41 No 48 58.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56807484 + NM_058216 RAD51C 0 . . . 2 74.57 23 5.17 No 22 0.28 No 0 0 No -22 0.92 Yes 49 49.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1226387 + NM_000455 STK11 0 . . . 0.32 58.9 14 4.47 No 13 0.41 No 0 0 No -28 0.26 No 44 80.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68488757 + NM_133509 RAD51B 0 . . . 0.19 64.61 15 5 No 21 0.7 No 0 0 No -18 0.42 No 44 55.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68833668 + NM_004360 CDH1 0 . . . 0.48 76.6 16 5.8 Yes 56 0.83 Yes 0 0 No -27 0.34 No 54 76.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68789820 + NM_133509 RAD51B 0 . . . 5.1 84.6 17 5.17 No 13 0.79 Yes 0 0 No -22 0.42 No 45 93.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108209308 + NM_000051 ATM 0 . . . 0.73 78.49 20 4.22 No 70 -6.17 No 0 0 No -34 0.56 No 45 30.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69032037 + NM_133509 RAD51B 0 . . . 0.86 71.3 16 3.87 No 3 0.53 No 0 0 No -27 0.72 Yes 55 42.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47667791 + NM_000251 MSH2 0 . . . 3.26 68.45 31 7.13 Yes 3 -1.77 No 0 0 No -30 0.55 No 42 84.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59822586 - NM_032043 BRIP1 0 . . . 6.43 78.2 16 4.36 No 8 0.71 No 0 0 No -32 0.4 No 39 92.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131979345 + NM_005732 RAD50 0 . . . 4.9 84.2 32 5.57 Yes 5 1.52 Yes 0 0 No -31 0.93 Yes 37 57.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215653994 - NM_000465 BARD1 0 . . . 2.34 79.74 25 4.97 No 45 1.16 Yes 0 0 No -24 0.64 No 25 66.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108240393 + NM_000051 ATM 0 . . . 2.3 70.43 18 3.96 No 11 0.58 No 0 0 No -45 0.53 No 27 41.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37079775 + NM_000249 MLH1 0 . . . 1.04 0 13 4.54 No 6 0.73 No 0 0 No -23 0.61 No 52 71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41260670 - NM_007294 BRCA1 0 . . . 3.71 77.29 37 6.11 Yes 41 -0.13 No 0 0 No -36 0.41 No 53 70.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59941993 - NM_032043 BRIP1 0 . . . 2.88 81.36 24 5.29 No 53 1.48 Yes 0 0 No -23 0.93 Yes 48 61.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68405475 + NM_133509 RAD51B 0 . . . 5.87 73.64 62 7.35 Yes 51 -4.4 No 0 0 No -36 0.44 No 43 79.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68759330 + NM_133509 RAD51B 0 . . . 0.41 0 62 8.02 Yes 10 0.88 Yes 0 0 No -29 0.82 Yes 39 71.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68953133 + NM_133509 RAD51B 0 . . . 1.54 74.6 29 6.28 Yes 45 0.22 No 0 0 No -28 0.76 Yes 53 49.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68677695 + NM_133509 RAD51B 0 . . . 8.44 90.56 17 4.8 No 21 0.65 No 0 0 No -36 0.71 Yes 37 80.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47692625 + NM_000251 MSH2 0 . . . 1.9 60.6 19 4.61 No 68 -6.15 No 0 0 No -18 0.53 No 27 24.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68851001 + NM_004360 CDH1 0 . . . 2.64 73.51 12 4.24 No 12 0.8 Yes 0 0 No -24 0.51 No 46 72.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94182137 - NM_005591 MRE11 0 . . . 5.09 0 22 5.07 No 7 1.84 Yes 0 0 No -21 0.6 No 33 52.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131964510 + NM_005732 RAD50 0 . . . 4.02 81.28 20 4.99 No 67 -4.96 No 0 0 No -23 0.36 No 47 41.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68798509 + NM_133509 RAD51B 0 . . . 4.63 74.88 26 5 No 14 0.91 Yes 0 0 No -21 0.6 No 49 66.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68544197 + NM_133509 RAD51B 0 . . . 1.02 61.09 19 4.32 No 68 0.48 No 0 0 No -24 0.62 No 57 60.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69093703 + NM_133509 RAD51B 0 . . . 1.1 71.32 19 4.34 No 66 0.42 No 0 0 No -28 0.5 No 42 44.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190712284 + NM_000534 PMS1 0 . . . 4.92 73.36 17 4.1 No 68 0.22 No 0 0 No -30 0.58 No 41 53.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59768182 - NM_032043 BRIP1 0 . . . 2.21 63.72 39 6.24 Yes 23 0.81 Yes 0 0 No -32 0.93 Yes 31 71.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59817907 - NM_032043 BRIP1 0 . . . 8.4 78.09 18 4.88 No 70 0.4 No 0 0 No -17 0.53 No 36 94.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47726501 + NM_000251 MSH2 0 . . . 6.44 85.36 18 5.91 Yes 73 -4.58 No 0 0 No -17 0.39 No 39 95.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68542766 + NM_133509 RAD51B 0 . . . 3.83 84.75 10 4 No 67 0.48 No 0 0 No -26 0.32 No 38 41.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59822032 - NM_032043 BRIP1 0 . . . 2.18 72.25 19 6.32 Yes 36 0.58 No 0 0 No -30 0.48 No 55 36.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190725328 + NM_000534 PMS1 0 . . . 2.57 73.89 16 5.57 Yes 9 0.63 No 0 0 No -26 0.5 No 49 88.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94159531 - NM_005591 MRE11 0 . . . 2.1 0 19 4.69 No 11 0.83 Yes 0 0 No -18 0.77 Yes 46 78.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68951260 + NM_133509 RAD51B 0 . . . 3.25 80.12 44 6.75 Yes 8 1.2 Yes 0 0 No -43 0.7 Yes 50 87.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32907467 + NM_000059 BRCA2 0 . . . 0.95 74.03 21 5 No -3 0.46 No 0 0 No -20 0.7 Yes 57 38.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108156113 + NM_000051 ATM 0 . . . 1.62 71.19 15 5.35 No 24 1.11 Yes 0 0 No -22 0.93 Yes 51 55.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68573553 + NM_133509 RAD51B 0 . . . 6.21 93.29 17 4.58 No 7 0.76 No 0 0 No -16 0.7 Yes 47 91.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23642706 - NM_024675 PALB2 0 . . . 2.43 65.88 31 5.66 Yes 21 -0.35 No 0 0 No -30 0.48 No 47 87.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68834818 + NM_004360 CDH1 0 . . . 3.93 76.83 23 4.79 No 73 0.94 Yes 0 0 No -22 0.92 Yes 37 77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69099587 + NM_133509 RAD51B 0 . . . 2.75 83.83 30 5.38 No -3 0.67 No 0 0 No -29 0.66 No 49 92.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68839969 + NM_004360 CDH1 0 . . . 3.17 89.08 19 5.81 Yes 33 0.81 Yes 0 0 No -21 0.7 Yes 50 71.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21973683 - NM_000077 CDKN2A 0 . . . 0.69 73.9 10 5.2 No 29 2.22 Yes 0 0 No -28 0.45 No 29 95.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29126653 - NM_001005735 CHEK2 0 . . . 0.42 74.73 52 6.98 Yes 33 1.16 Yes 0 0 No -30 0.65 No 25 51.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68582080 + NM_133509 RAD51B 0 . . . 0.58 73.32 27 7.46 Yes 74 -1.73 No 0 0 No -26 0.86 Yes 13 36.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68815833 + NM_004360 CDH1 0 . . . 4.15 68.18 16 4.99 No 26 1.22 Yes 0 0 No -15 0.48 No 45 70.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68865006 + NM_004360 CDH1 0 . . . 3.01 0 28 5.69 Yes 46 1.18 Yes 0 0 No -27 0.72 Yes 29 93.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68296167 + NM_133509 RAD51B 0 . . . 2.41 72.33 17 5.39 No 30 0.87 Yes 0 0 No -16 0.71 Yes 28 59.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69146509 + NM_133509 RAD51B 0 . . . 1.36 0 25 4.67 No 53 1.75 Yes 0 0 No -27 0.8 Yes 40 50.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90958318 - NM_002485 NBN 0 . . . 4.34 69.3 25 3.82 No 76 -4.81 No 0 0 No -22 0.63 No 50 82.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131921390 + NM_005732 RAD50 0 . . . 4.07 87.63 41 6.48 Yes -4 1.31 Yes 0 0 No -40 0.48 No 49 85.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68530556 + NM_133509 RAD51B 0 . . . 6.35 82.42 36 6.71 Yes -1 0.15 No 0 0 No -28 0.77 Yes 51 45.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1215300 + NM_000455 STK11 0 . . . 3.06 63.49 18 4.69 No 35 -3.22 No 0 0 No -56 0.49 No 27 46.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75513797 - NM_001040108 MLH3 0 . . . 2.05 76.63 18 4.81 No 74 0.78 Yes 0 0 No -43 0.61 No 50 32.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41210338 - NM_007294 BRCA1 0 . . . 2.25 73.35 47 9.95 Yes 28 1.21 Yes 0 0 No -47 0.47 No 38 31.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47651673 + NM_000251 MSH2 0 . . . 2.49 64.29 19 5 No 62 1.54 Yes 0 0 No -18 0.59 No 49 72.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108165450 + NM_000051 ATM 0 . . . 0.16 0 37 6.93 Yes 63 -4.63 No 0 0 No -36 0.42 No 51 65.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68572670 + NM_133509 RAD51B 0 . . . 0.1 63.15 17 4.8 No 63 0.85 Yes 0 0 No -49 0.32 No 52 45.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68736846 + NM_133509 RAD51B 0 . . . 1.39 0 31 5.1 No 62 0.78 Yes 0 0 No -30 0.33 No 50 55.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68647727 + NM_133509 RAD51B 0 . . . 2.83 81.14 26 5.39 No 53 -2.47 No 0 0 No -50 0.66 Yes 48 60.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68839682 + NM_004360 CDH1 0 . . . 1.66 75.05 19 4.39 No 7 0.89 Yes 0 0 No -18 0.54 No 51 76.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47700349 + NM_000251 MSH2 0 . . . 3.59 84.79 31 5.25 No 2 1.51 Yes 0 0 No -30 0.83 Yes 19 80.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190718099 + NM_000534 PMS1 0 . . . 1.36 66.69 86 7.5 Yes 67 0.77 No 0 0 No -18 0.47 No 42 30 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47759297 + NM_000251 MSH2 0 . . . 0.59 68.55 18 4.9 No 59 0.11 No 0 0 No -17 0.47 No 53 52.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68556093 + NM_133509 RAD51B 0 . . . 1.05 66.5 17 3.98 No 72 0.82 Yes 0 0 No -28 0.8 Yes 42 36.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68606400 + NM_133509 RAD51B 0 . . . 1.76 73.3 24 5.48 No 60 0.94 Yes 0 0 No -23 0.84 Yes 26 63.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47682212 + NM_000251 MSH2 0 . . . 5 82.81 22 4.69 No 49 0.79 Yes 0 0 No -21 0.97 Yes 37 68.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68866206 + NM_004360 CDH1 0 . . . 5.51 82.63 12 4.24 No 8 0.7 No 0 0 No -24 0.28 No 50 83.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190660241 + NM_000534 PMS1 0 . . . 0.48 62.06 12 6.07 Yes 62 0.05 No 0 0 No -23 0.5 No 28 41.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59773945 - NM_032043 BRIP1 0 . . . 2.36 86.71 19 7.07 Yes 76 1.48 Yes 0 0 No -18 0.54 No 50 63.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89667354 + NM_000314 PTEN 0 . . . 1.53 67.42 29 4.96 No 62 -5.28 No 0 0 No -28 0.59 No 42 33.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190659434 + NM_000534 PMS1 0 . . . 1.42 72.96 18 4.9 No 31 -3.87 No 0 0 No -17 0.37 No 46 40.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68928302 + NM_133509 RAD51B 0 . . . 5.61 83.69 11 5.21 No 18 0.95 Yes 0 0 No -21 0.38 No 40 91.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94219093 - NM_005591 MRE11 0 . . . 4.35 71.76 22 4.91 No 2 0.24 No 0 0 No -24 0.38 No 48 77.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68841472 + NM_004360 CDH1 0 . . . 0.35 65.63 14 4.67 No 43 -4.9 No 0 0 No -21 0.62 No 38 54.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59941084 - NM_032043 BRIP1 0 . . . 2.19 57.77 55 7.48 Yes 18 0.52 No 0 0 No -40 0.73 Yes 40 59.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68851540 + NM_133509 RAD51B 0 . . . 9.69 90.82 21 6.18 Yes 4 1.29 Yes 0 0 No -21 0.39 No 44 93.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68313848 + NM_133509 RAD51B 0 . . . 1.06 0 25 4.2 No 32 0 No 0 0 No -24 0.91 Yes 47 84.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108095140 + NM_000051 ATM 0 . . . 3.48 79.05 16 5.16 No 63 -4.77 No 0 0 No -20 0.86 Yes 42 40.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59904776 - NM_032043 BRIP1 0 . . . 6.41 82.18 16 5.23 No 37 0.92 Yes 0 0 No -21 0.55 No 40 55.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215665316 - NM_000465 BARD1 0 . . . 7.58 82.98 19 4.52 No 51 -1.74 No 0 0 No -25 0.54 No 42 65.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131946071 + NM_005732 RAD50 0 . . . 2.45 0 25 5.39 No 1 0.56 No 0 0 No -22 0.59 No 49 84.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68820338 + NM_004360 CDH1 0 . . . 3.24 70.85 14 3.92 No 23 0.61 No 0 0 No -35 0.67 Yes 35 42.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23617397 - NM_024675 PALB2 0 . . . 6.68 85.84 17 4.47 No 38 0.25 No 0 0 No -24 0.34 No 47 73.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68530693 + NM_133509 RAD51B 0 . . . 7.72 91.19 13 3.95 No 72 1.33 Yes 0 0 No -21 0.54 No 24 72.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68897512 + NM_133509 RAD51B 0 . . . 2.39 70.41 28 6.15 Yes 58 1.29 Yes 0 0 No -27 0.83 Yes 54 35.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47799587 + NM_000251 MSH2 0 . . . 5.34 81.2 19 4.66 No 34 -2.08 No 0 0 No -34 0.48 No 42 78.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32970615 + NM_000059 BRCA2 0 . . . 3.36 74.65 20 10.49 Yes 69 -4 No 0 0 No -19 0.6 No 36 61.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1207526 + NM_000455 STK11 0 . . . 4.85 82.55 40 7.14 Yes 12 1.13 Yes 0 0 No -39 0.86 Yes 46 76.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75483460 - NM_001040108 MLH3 0 . . . 5.34 88 16 4.69 No 40 -2.92 No 0 0 No -48 0.42 No 35 57.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108154352 + NM_000051 ATM 0 . . . 1.17 0 16 5.14 No 2 -1.81 No 0 0 No -29 0.5 No 51 46.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68822019 + NM_133509 RAD51B 0 . . . 4.46 68.29 19 5.56 Yes 36 0.65 No 0 0 No -25 0.69 Yes 48 54.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90980810 - NM_002485 NBN 0 . . . 1.99 73.05 12 5.8 Yes 72 1.08 Yes 0 0 No -11 0.42 No 44 70.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32893749 + NM_000059 BRCA2 0 . . . 2.02 54.3 23 4.9 No 71 0.87 Yes 0 0 No -18 0.52 No 38 51.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105185063 + NM_021930 RINT1 0 . . . 3.6 85.02 12 4.24 No 4 1.05 Yes 0 0 No -40 0.58 No 54 77.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68445479 + NM_133509 RAD51B 0 . . . 3.78 79.78 23 4.34 No 38 0.45 No 0 0 No -22 0.48 No 44 48.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69117364 + NM_133509 RAD51B 0 . . . 2.53 76.4 24 3.75 No 68 -4.38 No 0 0 No -24 0.26 No 44 66.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41206289 - NM_007294 BRCA1 0 . . . 3.89 0 28 4.84 No 35 0.65 No 0 0 No -28 0.78 Yes 52 62.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68802782 + NM_004360 CDH1 0 . . . 7.9 87.46 19 4.6 No 35 0.73 No 0 0 No -54 0.46 No 37 51.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94184920 - NM_005591 MRE11 0 . . . 5.68 86.63 38 5.99 Yes 34 0.58 No 0 0 No -32 0.76 Yes 47 84.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108239898 + NM_000051 ATM 0 . . . 1.02 69.36 31 5.92 Yes 46 0.99 Yes 0 0 No -31 0.66 Yes 12 70.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40997119 + NM_001164269 RAD51 0 . . . 3.15 80.37 25 5.57 Yes 11 1.64 Yes 0 0 No -24 0.76 Yes 47 63.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89717222 + NM_000314 PTEN 0 . . . 1.6 76.44 15 5.33 No 33 1.02 Yes 0 0 No -28 0.27 No 50 61.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68809745 + NM_004360 CDH1 0 . . . 4.98 74.43 9 5.1 No 14 0 No 0 0 No -23 0.38 No 49 75.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59859115 - NM_032043 BRIP1 0 . . . 2.24 80.12 39 7.59 Yes 7 1.16 Yes 0 0 No -28 0.91 Yes 51 74.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108228200 + NM_000051 ATM 0 . . . 7.79 81.43 31 3.9 No 12 0.07 No 0 0 No -30 0.38 No 46 87.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94177035 - NM_005591 MRE11 0 . . . 0.8 64.6 34 7.01 Yes 5 0.6 No 0 0 No -33 0.66 No 53 60.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69074135 + NM_133509 RAD51B 0 . . . 7.42 80.5 37 7.31 Yes 72 0.55 No 0 0 No -40 0.54 No 46 79.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47736076 + NM_000251 MSH2 0 . . . 7.39 0 20 6.16 Yes 76 1.38 Yes 0 0 No -31 0.64 No 41 56.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41226219 - NM_007294 BRCA1 0 . . . 1.52 67.76 40 6.93 Yes 75 -4.2 No 0 0 No -28 0.57 No 42 76.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47776571 + NM_000251 MSH2 0 . . . 0.78 59.07 38 5.34 No 15 0.74 No 0 0 No -33 0.45 No 40 78.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68823573 + NM_004360 CDH1 0 . . . 7.19 87.2 35 5.6 Yes 7 0.93 Yes 0 0 No -34 0.59 No 38 35.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68298946 + NM_133509 RAD51B 0 . . . 1.73 74.34 24 5.33 No 3 0.83 Yes 0 0 No -23 0.71 Yes 50 86.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108217071 + NM_000051 ATM 0 . . . 5.26 89.73 29 7.85 Yes 16 0.93 Yes 0 0 No -27 0.61 No 52 41.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215664359 - NM_000465 BARD1 0 . . . 1.41 67.44 20 3.86 No 45 0.28 No 0 0 No -23 0.86 Yes 51 31.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68760536 + NM_133509 RAD51B 0 . . . 7.38 71.8 22 4.57 No 19 0.96 Yes 0 0 No -21 0.54 No 34 77.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68560093 + NM_133509 RAD51B 0 . . . 7.09 81.54 23 4.88 No 7 0.51 No 0 0 No -22 0.76 Yes 47 45.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37039902 + NM_000249 MLH1 0 . . . 4.34 76.74 26 5.38 No 57 1.02 Yes 0 0 No -25 0.81 Yes 51 50.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59869321 - NM_032043 BRIP1 0 . . . 3.2 75.02 22 4.58 No 21 0.3 No 0 0 No -21 0.76 Yes 51 72.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131897691 + NM_005732 RAD50 0 . . . 7.67 90.08 33 5.4 No 33 2 Yes 0 0 No -27 0.82 Yes 43 91.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190678158 + NM_000534 PMS1 0 . . . 0.21 63.65 19 6.33 Yes 58 0.34 No 0 0 No -18 0.71 Yes 58 57.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89703776 + NM_000314 PTEN 0 . . . 0.34 61.67 28 6.18 Yes 62 -4.79 No 0 0 No -32 0.56 No 40 43.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45806593 - NM_001048171 MUTYH 0 . . . 7.89 88.18 36 7.34 Yes 62 0.22 No 0 0 No -35 0.47 No 49 80.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131903857 + NM_005732 RAD50 0 . . . 5.38 88.68 9 5.39 No 52 1.52 Yes 0 0 No -57 0.46 No 49 94.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23648402 - NM_024675 PALB2 0 . . . 2.24 80.12 26 5.2 No 7 1.02 Yes 0 0 No -25 0.8 Yes 51 85.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108223131 + NM_000051 ATM 0 . . . 6.54 81.04 19 5.65 Yes 74 -5.19 No 0 0 No -27 0.39 No 40 53.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23643738 - NM_024675 PALB2 0 . . . 3.36 84.79 25 5.57 Yes 60 1.4 Yes 0 0 No -24 0.86 Yes 19 80.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32889639 + NM_000059 BRCA2 0 . . . 1.06 70.71 33 6.08 Yes 72 -3.86 No 0 0 No -30 0.64 No 55 25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152343157 - NM_005431 XRCC2 0 . . . 2.75 70.12 24 5.12 No 5 0.97 Yes 0 0 No -23 0.56 No 53 63.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68992392 + NM_133509 RAD51B 0 . . . 0.45 0 22 5.2 No 39 1.1 Yes 0 0 No -27 0.43 No 58 49.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48027712 + NM_000179 MSH6 0 . . . 5.9 81.31 21 3.9 No 9 0.75 No 0 0 No -20 0.38 No 49 55.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68801197 + NM_133509 RAD51B 0 . . . 5.6 87.47 35 6.08 Yes 59 0.31 No 0 0 No -34 0.63 No 47 46.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7576489 - NM_000546 TP53 0 . . . 1.62 66.27 23 4.9 No 70 0.27 No 0 0 No -22 0.82 Yes 54 34.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41250205 - NM_007294 BRCA1 0 . . . 3.47 77.17 37 6.23 Yes 64 -2.12 No 0 0 No -32 0.64 No 46 59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68661326 + NM_133509 RAD51B 0 . . . 6.75 80.08 21 4.4 No 12 1.65 Yes 0 0 No -23 0.85 Yes 46 62.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68827349 + NM_133509 RAD51B 0 . . . 0.64 61.43 25 5.37 No 64 1.1 Yes 0 0 No -24 0.93 Yes 20 92.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47759930 + NM_000251 MSH2 0 . . . 0.76 0 17 4.43 No 71 -3.25 No 0 0 No -48 0.57 No 41 59.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68995365 + NM_133509 RAD51B 0 . . . 1.24 63.67 43 7.07 Yes 34 0.66 No 0 0 No -42 0.76 Yes 41 44.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47793174 + NM_000251 MSH2 0 . . . 0.44 77.7 21 7 Yes 47 0.01 No 0 0 No -20 0.87 Yes 45 34.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89669523 + NM_000314 PTEN 0 . . . 4.24 87.34 31 5.52 No 34 0.18 No 0 0 No -25 0.64 No 49 74.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29130543 - NM_001005735 CHEK2 0 . . . 3.59 85.41 55 6.5 Yes 57 0.45 No 0 0 No -29 0.95 Yes 50 72.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69067928 + NM_133509 RAD51B 0 . . . 2.23 0 19 5.43 No 18 -0.98 No 0 0 No -37 0.43 No 40 52.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105174078 + NM_021930 RINT1 0 . . . 1.25 70.45 51 7.53 Yes 57 -3.51 No 0 0 No -50 0.43 No 49 44.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59841248 - NM_032043 BRIP1 0 . . . 7.78 76.45 16 4.43 No 2 0.25 No 0 0 No -37 0.43 No 35 79.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94211901 - NM_005591 MRE11 0 . . . 6.74 71.85 25 5.56 Yes 24 -2.85 No 0 0 No -24 0.73 Yes 45 52.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90946117 - NM_002485 NBN 0 . . . 4.13 73.93 50 7.24 Yes 26 1.15 Yes 0 0 No -32 0.49 No 39 85.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6011359 - NM_000535 PMS2 0 . . . 0.07 73.74 25 5.1 No 70 0.39 No 0 0 No -19 0.53 No 50 75.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69041068 + NM_133509 RAD51B 0 . . . 3.42 70.85 38 6.14 Yes 55 1.26 Yes 0 0 No -33 0.9 Yes 40 76.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56813328 + NM_058216 RAD51C 0 . . . 5.15 71.34 28 5.48 No 13 1.57 Yes 0 0 No -23 0.61 No 45 86.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68778847 + NM_004360 CDH1 0 . . . 5.61 72.58 19 7.07 Yes 11 1.13 Yes 0 0 No -18 0.63 No 47 84.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47722044 + NM_000251 MSH2 0 . . . 6.38 81.19 24 5 No 73 1.21 Yes 0 0 No -23 0.82 Yes 29 89.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131952653 + NM_005732 RAD50 0 . . . 2.76 70.76 13 6.33 Yes 7 0.87 Yes 0 0 No -33 0.59 No 40 91.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68803290 + NM_004360 CDH1 0 . . . 1.36 82.05 13 5.74 Yes -1 1.33 Yes 0 0 No -26 0.54 No 37 76.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215626331 - NM_000465 BARD1 0 . . . 3.32 70.16 15 4.34 No 3 1.42 Yes 0 0 No -52 0.41 No 19 95.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90958150 - NM_002485 NBN 0 . . . 0.66 73.71 15 4.58 No -2 0.31 No 0 0 No -32 0.46 No 50 92.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190731858 + NM_000534 PMS1 0 . . . 2.88 75.44 37 7.2 Yes 3 0.53 No 0 0 No -21 0.72 Yes 51 27.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89661468 + NM_000314 PTEN 0 . . . 0.69 76.69 16 3.64 No 69 -1.92 No 0 0 No -20 0.71 Yes 44 74.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68314997 + NM_133509 RAD51B 0 . . . 4.2 70.85 15 4.5 No 21 1.78 Yes 0 0 No -21 0.52 No 42 80.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215636351 - NM_000465 BARD1 0 . . . 1.2 85.37 38 6.24 Yes 33 1.01 Yes 0 0 No -32 0.42 No 50 60.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68600401 + NM_133509 RAD51B 0 . . . 0.62 74.26 27 4.03 No 35 1.22 Yes 0 0 No -26 0.75 Yes 23 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41269824 - NM_007294 BRCA1 0 . . . 4.77 71.13 38 7.92 Yes 18 0.69 No 0 0 No -33 0.5 No 40 85.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90990356 - NM_002485 NBN 0 . . . 8.71 84.85 39 6.3 Yes 1 1.04 Yes 0 0 No -38 0.59 No 45 63.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37091082 + NM_000249 MLH1 0 . . . 0.02 76.68 41 5.86 Yes 27 -2.57 No 0 0 No -20 0.78 Yes 54 47.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59841345 - NM_032043 BRIP1 0 . . . 4.64 84.55 32 6.93 Yes 31 0.31 No 0 0 No -31 0.84 Yes 44 42.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68475915 + NM_133509 RAD51B 0 . . . 4.26 68.35 30 4.19 No 29 0.29 No 0 0 No -29 0.5 No 29 68.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68362032 + NM_133509 RAD51B 0 . . . 5.96 89.11 28 5.27 No 9 0.54 No 0 0 No -21 0.75 Yes 49 78.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56805697 + NM_058216 RAD51C 0 . . . 0.39 73.51 52 4.65 No 17 -3.57 No 0 0 No -21 0.73 Yes 15 41.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68791012 + NM_004360 CDH1 0 . . . 0.58 83.78 22 5.74 Yes 12 1.43 Yes 0 0 No -21 0.79 Yes 46 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47778778 + NM_000251 MSH2 0 . . . 0.64 65.27 20 4.86 No 2 0.93 Yes 0 0 No -44 0.63 No 56 71.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108241013 + NM_000051 ATM 0 . . . 6.3 91.15 17 4.69 No 41 0.95 Yes 0 0 No -23 0.72 Yes 48 33.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68986013 + NM_133509 RAD51B 0 . . . 5.65 82.87 15 4.57 No 74 -3.5 No 0 0 No -40 0.54 No 48 51.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68465226 + NM_133509 RAD51B 0 . . . 1.39 64.05 18 5.94 Yes 49 0.65 No 0 0 No -27 0.38 No 36 60.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68585754 + NM_133509 RAD51B 0 . . . 2.81 76.09 17 4.8 No 38 1.45 Yes 0 0 No -16 0.26 No 44 66.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69016504 + NM_133509 RAD51B 0 . . . 0.87 78.27 20 4.58 No 10 1.11 Yes 0 0 No -20 0.64 No 48 91.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47771351 + NM_000251 MSH2 0 . . . 5.14 81.5 15 5.27 No 49 -2.25 No 0 0 No -19 0.32 No 45 83.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190658406 + NM_000534 PMS1 0 . . . 3.99 75.66 13 5.7 Yes 76 -2.9 No 0 0 No -27 0.82 Yes 46 76.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1212893 + NM_000455 STK11 0 . . . 3.74 82.27 22 5.29 No 52 0.33 No 0 0 No -21 0.46 No 20 72.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29112816 - NM_001005735 CHEK2 0 . . . 3.67 66.66 22 5.29 No 40 0.2 No 0 0 No -21 0.86 Yes 37 80.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131912655 + NM_005732 RAD50 0 . . . 0.77 70.46 22 4.32 No 50 0.69 No 0 0 No -52 0.63 No 44 87.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37058492 + NM_000249 MLH1 0 . . . 0.44 70.18 21 5.23 No 64 0.56 No 0 0 No -20 0.62 No 46 64.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37056397 + NM_000249 MLH1 0 . . . 2.17 73.3 46 7.62 Yes 64 -3.55 No 0 0 No -54 0.61 No 41 41.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47671483 + NM_000251 MSH2 0 . . . 1.76 68.73 18 6.48 Yes 0 0.89 Yes 0 0 No -24 0.39 No 43 74.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68834701 + NM_004360 CDH1 0 . . . 3.41 84.35 20 4.58 No 58 -2.04 No 0 0 No -19 0.92 Yes 43 68.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68776979 + NM_004360 CDH1 0 . . . 11.09 86.58 30 5.48 No 44 -0.5 No 0 0 No -29 0.8 Yes 40 64.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68397334 + NM_133509 RAD51B 0 . . . 6.34 78.12 28 4.59 No 38 0.83 Yes 0 0 No -27 0.82 Yes 41 77.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69109066 + NM_133509 RAD51B 0 . . . 4.36 85.52 16 5.65 Yes 70 0.85 Yes 0 0 No -31 0.58 No 20 67.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108188644 + NM_000051 ATM 0 . . . 1.75 69.71 12 4.69 No 47 0.84 Yes 0 0 No -37 0.55 No 48 35.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41195369 - NM_007294 BRCA1 0 . . . 2.1 77.6 28 5.83 Yes 6 0.4 No 0 0 No -20 0.61 No 52 71.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94174235 - NM_005591 MRE11 0 . . . 4.99 73.61 23 6.21 Yes 53 -4.29 No 0 0 No -22 0.78 Yes 45 44.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6038186 - NM_000535 PMS2 0 . . . 1.47 73.37 29 4.61 No 71 1.1 Yes 0 0 No -29 0.52 No 54 39.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68840528 + NM_004360 CDH1 0 . . . 0.93 67.79 28 5.35 No 52 0.59 No 0 0 No -27 0.75 Yes 44 96.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152352480 - NM_005431 XRCC2 0 . . . 5.87 83.12 25 5.19 No 4 0.97 Yes 0 0 No -23 0.75 Yes 45 37.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131914019 + NM_005732 RAD50 0 . . . 7.64 83.41 25 4.5 No 58 0.67 No 0 0 No -24 0.83 Yes 38 52.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47633433 + NM_000251 MSH2 0 . . . 5.24 80.12 18 3.51 No 7 1.02 Yes 0 0 No -17 0.48 No 51 85.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48029456 + NM_000179 MSH6 0 . . . 5.8 80.51 27 4.19 No 48 0.05 No 0 0 No -22 0.78 Yes 45 45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152368273 - NM_005431 XRCC2 0 . . . 3.06 84 33 5.8 Yes 72 1.23 Yes 0 0 No -32 0.83 Yes 24 72.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68890535 + NM_133509 RAD51B 0 . . . 4.66 69.74 43 5.83 Yes 27 0.84 Yes 0 0 No -27 0.46 No 44 78.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56771309 + NM_058216 RAD51C 0 . . . 6.63 83.75 22 5.83 Yes 48 1.1 Yes 0 0 No -21 0.7 Yes 50 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23632643 - NM_024675 PALB2 0 . . . 5.04 75.69 13 4.9 No 25 0.95 Yes 0 0 No -20 0.35 No 53 80.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108108864 + NM_000051 ATM 0 . . . 2.29 80.58 20 6.73 Yes 33 1.02 Yes 0 0 No -19 0.55 No 25 54.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47735082 + NM_000251 MSH2 0 . . . 0.65 0 17 4.79 No 52 -5.16 No 0 0 No -53 0.49 No 35 44.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68992087 + NM_133509 RAD51B 0 . . . 4.84 78 25 5.83 Yes 55 -2.22 No 0 0 No -24 0.57 No 46 84.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29110599 - NM_001005735 CHEK2 0 . . . 3.75 72.5 31 6.9 Yes 68 -4.09 No 0 0 No -31 0.78 Yes 38 81.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32907662 + NM_000059 BRCA2 0 . . . 7.12 71.16 33 7.07 Yes 76 0.92 Yes 0 0 No -32 0.85 Yes 41 40.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47744217 + NM_000251 MSH2 0 . . . 5.88 82.67 27 5.12 No 74 -4.5 No 0 0 No -26 0.41 No 50 42.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152350110 - NM_005431 XRCC2 0 . . . 7.11 82.2 23 4.89 No 4 0.73 No 0 0 No -22 0.9 Yes 54 78.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68844790 + NM_133509 RAD51B 0 . . . 6.87 79.04 18 4.77 No 7 0.68 No 0 0 No -22 0.39 No 44 68.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33445358 - NM_002878 RAD51D 0 . . . 5.92 87.78 37 8.5 Yes 7 0.72 No 0 0 No -36 0.68 Yes 44 66.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042758 - NM_000535 PMS2 0 . . . 2.24 80.12 85 7.84 Yes 7 1.16 Yes 0 0 No -44 0.33 No 51 81.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89654644 + NM_000314 PTEN 0 . . . 3.77 76.59 24 3.88 No 71 -4.78 No 0 0 No -29 0.61 No 43 68.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108209809 + NM_000051 ATM 0 . . . 3.39 84.02 19 5 No 48 -2.84 No 0 0 No -38 0.88 Yes 49 58.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108169741 + NM_000051 ATM 0 . . . 3.62 77.45 40 8.31 Yes 70 -3.99 No 0 0 No -39 0.85 Yes 50 89.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68989623 + NM_133509 RAD51B 0 . . . 1.37 73.39 33 6.55 Yes 7 0.63 No 0 0 No -32 0.61 No 51 88.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59842162 - NM_032043 BRIP1 0 . . . 6.36 68 21 5.86 Yes 16 2.28 Yes 0 0 No -24 0.94 Yes 42 72.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69047829 + NM_133509 RAD51B 0 . . . 1.35 79.13 30 5.8 Yes 57 0.85 Yes 0 0 No -29 0.81 Yes 53 91.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108167189 + NM_000051 ATM 0 . . . 1.75 81.47 23 5.38 No 34 1.04 Yes 0 0 No -27 0.76 Yes 19 47.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7567798 - NM_000546 TP53 0 . . . 1.23 0 17 6 Yes 22 0.26 No 0 0 No -29 0.69 Yes 50 60.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108122463 + NM_000051 ATM 0 . . . 4.45 77.61 24 4.78 No 9 0.83 Yes 0 0 No -42 0.68 Yes 49 88.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215629173 - NM_000465 BARD1 0 . . . 6.28 78.32 14 4.47 No 59 1.01 Yes 0 0 No -45 0.39 No 41 71.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108199530 + NM_000051 ATM 0 . . . 1.01 69.9 25 5.57 Yes -2 0.71 No 0 0 No -24 0.85 Yes 43 87.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89697259 + NM_000314 PTEN 0 . . . 6.2 76.13 25 5.38 No 19 1.43 Yes 0 0 No -22 0.74 Yes 39 96.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68484884 + NM_133509 RAD51B 0 . . . 6.23 74.32 30 6.13 Yes 11 0.37 No 0 0 No -23 0.79 Yes 40 67.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68618266 + NM_133509 RAD51B 0 . . . 0.45 58.54 17 4.8 No 21 0.47 No 0 0 No -22 0.57 No 37 29.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47683100 + NM_000251 MSH2 0 . . . 10.41 88.62 25 5.39 No 23 0.53 No 0 0 No -24 0.81 Yes 51 49.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190708932 + NM_000534 PMS1 0 . . . 1.6 64.55 44 5.99 Yes 62 0.74 No 0 0 No -37 0.84 Yes 44 61.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68683060 + NM_133509 RAD51B 0 . . . 0.88 75.25 17 5.39 No 46 0.83 Yes 0 0 No -22 0.63 No 55 26.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69095366 + NM_133509 RAD51B 0 . . . 0.4 61.62 27 4.99 No NA NA NA 0 0 No -26 0.5 No 51 38.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69020022 + NM_133509 RAD51B 0 . . . 3.94 80.43 23 5.83 Yes 37 1.02 Yes 0 0 No -22 0.87 Yes 30 54.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68791720 + NM_004360 CDH1 0 . . . 4.72 0 29 6.46 Yes NA NA NA 0 0 No -28 0.86 Yes 36 10.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69069121 + NM_133509 RAD51B 0 . . . 7.32 83.2 40 6.89 Yes 42 2.11 Yes 0 0 No -27 0.75 Yes 39 77.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89672359 + NM_000314 PTEN 0 . . . 6.33 74.69 19 5.57 Yes 28 0.34 No 0 0 No -24 0.78 Yes 52 70.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90952111 - NM_002485 NBN 0 . . . 5 82.32 24 4.4 No 8 -2.75 No 0 0 No -23 0.55 No 51 71.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69117718 + NM_133509 RAD51B 0 . . . 5.33 72.8 29 5.72 Yes 69 -6.41 No 0 0 No -23 0.52 No 49 36.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344361 + NM_133509 RAD51B 0 . . . 7.27 79.65 17 5.83 Yes 28 0.58 No 0 0 No -16 0.52 No 35 66.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40988849 + NM_001164269 RAD51 0 . . . 8.89 85.63 32 6.86 Yes 57 0.6 No 0 0 No -31 0.51 No 45 51.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90986341 - NM_002485 NBN 0 . . . 1.01 68.55 18 8.45 Yes 74 -5.43 No 0 0 No -25 0.59 No 46 50.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68710504 + NM_133509 RAD51B 0 . . . 3.53 76.08 21 5 No 18 1.09 Yes 0 0 No -20 0.86 Yes 40 89.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131943573 + NM_005732 RAD50 0 . . . 7.46 79.58 14 4.32 No 67 1.25 Yes 0 0 No -48 0.5 No 47 54.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105174726 + NM_021930 RINT1 0 . . . 1.74 72.78 26 5.64 Yes 33 1.17 Yes 0 0 No -25 0.61 No 14 42.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68487219 + NM_133509 RAD51B 0 . . . 3.89 78.67 45 6.02 Yes 53 1.11 Yes 0 0 No -28 0.39 No 45 68.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68740132 + NM_133509 RAD51B 0 . . . 4.35 84.27 43 6.78 Yes 69 0.26 No 0 0 No -25 0.52 No 38 51.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69028084 + NM_133509 RAD51B 0 . . . 2.26 72.42 46 7.78 Yes 48 2.12 Yes 0 0 No -24 0.76 Yes 45 49.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215600948 - NM_000465 BARD1 0 . . . 1.25 78.47 21 5 No 63 0.08 No 0 0 No -20 0.8 Yes 50 71.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32910099 + NM_000059 BRCA2 0 . . . 0.43 0 26 5.35 No 38 0.95 Yes 0 0 No -25 0.87 Yes 53 47.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89634986 + NM_000314 PTEN 0 . . . 2.72 78.66 62 8.54 Yes 33 1.52 Yes 0 0 No -30 0.4 No 47 74.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108110456 + NM_000051 ATM 0 . . . 6.04 90.59 29 4.67 No 34 1.19 Yes 0 0 No -26 0.63 No 36 31.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68466933 + NM_133509 RAD51B 0 . . . 2.21 74.58 38 7 Yes 30 1.54 Yes 0 0 No -43 0.39 No 45 42.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68870443 + NM_004360 CDH1 0 . . . 2.86 79.95 20 5.53 No 52 1.46 Yes 0 0 No -28 0.75 Yes 54 71.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108099926 + NM_000051 ATM 0 . . . 0.37 0 26 6.23 Yes 34 0.7 No 0 0 No -25 0.82 Yes 24 57.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215606698 - NM_000465 BARD1 0 . . . 8.98 84.9 40 6.78 Yes 56 1.15 Yes 0 0 No -39 0.71 Yes 38 79.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89689932 + NM_000314 PTEN 0 . . . 0.34 63.17 16 4.74 No -1 -2.25 No 0 0 No -32 0.45 No 36 56.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68947464 + NM_133509 RAD51B 0 . . . 10.84 92.23 36 7.29 Yes 4 1.56 Yes 0 0 No -23 0.38 No 50 65.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47785735 + NM_000251 MSH2 0 . . . 4.24 0 18 4.58 No 57 0.44 No 0 0 No -17 0.5 No 24 70.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47641784 + NM_000251 MSH2 0 . . . 8.27 82.26 66 9.28 Yes 1 1.32 Yes 0 0 No -37 0.33 No 45 75.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89695860 + NM_000314 PTEN 0 . . . 6.79 85.88 16 7.68 Yes 65 0.71 No 0 0 No -28 0.54 No 46 82.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6027522 - NM_000535 PMS2 0 . . . 3.6 85.02 18 4.12 No 4 1.2 Yes 0 0 No -28 0.43 No 54 47.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59823177 - NM_032043 BRIP1 0 . . . 1.59 64.69 15 4.45 No 29 0.41 No 0 0 No -23 0.64 No 43 86.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59923517 - NM_032043 BRIP1 0 . . . 4.06 84.17 49 5.68 Yes 25 0.4 No 0 0 No -32 0.93 Yes 18 35.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23633001 - NM_024675 PALB2 0 . . . 2.16 64.89 22 5 No 68 -5.1 No 0 0 No -22 0.67 Yes 38 79.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41218211 - NM_007294 BRCA1 0 . . . 5.28 70.47 27 4.02 No 39 -3.61 No 0 0 No -26 0.36 No 43 61.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89706648 + NM_000314 PTEN 0 . . . 1.17 75.41 16 5.34 No 63 0.16 No 0 0 No -26 0.32 No 47 95.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68812610 + NM_004360 CDH1 0 . . . 1.51 68.85 27 5.57 Yes 0 0.35 No 0 0 No -24 0.56 No 58 68.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215659942 - NM_000465 BARD1 0 . . . 0.47 0 18 4.9 No 11 0.73 No 0 0 No -19 0.78 Yes 47 81.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90961650 - NM_002485 NBN 0 . . . 4.79 76.88 26 6.07 Yes 65 1.25 Yes 0 0 No -33 0.65 No 49 74.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89640536 + NM_000314 PTEN 0 . . . 6.45 74.61 34 4.57 No 12 0.71 No 0 0 No -28 0.87 Yes 43 64.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41273538 - NM_007294 BRCA1 0 . . . 3.1 85.02 28 5.58 Yes 3 1.02 Yes 0 0 No -28 0.44 No 45 65.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47727227 + NM_000251 MSH2 0 . . . 5.96 86.36 22 4.58 No 55 1.55 Yes 0 0 No -59 0.36 No 50 69.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94158257 - NM_005591 MRE11 0 . . . 6.05 75.23 16 5.46 No 2 1.97 Yes 0 0 No -15 0.4 No 51 62.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69144539 + NM_133509 RAD51B 0 . . . 3.22 83.08 17 7.06 Yes 37 -3.23 No 0 0 No -22 0.58 No 35 84.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190668849 + NM_000534 PMS1 0 . . . 7.15 83.58 18 5.27 No 1 0.81 Yes 0 0 No -21 0.84 Yes 41 87.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23640328 - NM_024675 PALB2 0 . . . 5.15 75.62 30 4.25 No 22 0.56 No 0 0 No -29 0.79 Yes 36 94.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59866071 - NM_032043 BRIP1 0 . . . 2.38 71.6 15 4.51 No 18 0.53 No 0 0 No -40 0.65 No 40 74.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6017585 - NM_000535 PMS2 0 . . . 6.3 83.82 23 5.39 No 6 1.17 Yes 0 0 No -22 0.91 Yes 52 82.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69042429 + NM_133509 RAD51B 0 . . . 1.39 81.79 25 4.9 No 34 2.34 Yes 0 0 No -24 0.82 Yes 49 28.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190731177 + NM_000534 PMS1 0 . . . 5.39 78.36 29 5.28 No 39 0.44 No 0 0 No -28 0.33 No 23 82.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75506984 - NM_001040108 MLH3 0 . . . 5.01 80.64 9 4.84 No 9 1.09 Yes 0 0 No -21 0.56 No 49 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68541926 + NM_133509 RAD51B 0 . . . 1.77 67.78 15 5.56 Yes -4 0.22 No 0 0 No -24 0.43 No 62 39.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47688638 + NM_000251 MSH2 0 . . . 5.65 70.03 35 6.16 Yes 74 0.08 No 0 0 No -34 0.64 No 40 61.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131960170 + NM_005732 RAD50 0 . . . 5.38 85.05 29 4.47 No 65 1.2 Yes 0 0 No -28 0.74 Yes 44 40.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68568510 + NM_133509 RAD51B 0 . . . 7.46 83.78 21 6 Yes 20 -0.47 No 0 0 No -37 0.54 No 51 66.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32919428 + NM_000059 BRCA2 0 . . . 3.26 68.79 27 5.61 Yes 71 0.55 No 0 0 No -26 0.89 Yes 52 86.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68573351 + NM_133509 RAD51B 0 . . . 8.72 90.65 26 5.11 No 16 1 Yes 0 0 No -25 0.55 No 42 75.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131967307 + NM_005732 RAD50 0 . . . 3.02 72.69 40 6.39 Yes 54 -0.96 No 0 0 No -39 0.43 No 46 81.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40999529 + NM_001164269 RAD51 0 . . . 2.88 0 17 4.66 No 40 0.47 No 0 0 No -16 0.53 No 42 83.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68741735 + NM_133509 RAD51B 0 . . . 0.78 60.05 25 5.08 No 62 -5.95 No 0 0 No -24 0.77 Yes 22 30.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68372757 + NM_133509 RAD51B 0 . . . 4.61 72.64 22 4.58 No 25 0.11 No 0 0 No -21 0.96 Yes 51 80.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68712349 + NM_133509 RAD51B 0 . . . 0.21 70.32 40 6.01 Yes 72 0.65 No 0 0 No -25 0.8 Yes 44 42.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1221503 + NM_000455 STK11 0 . . . 3.78 81.7 17 6.86 Yes 28 0.49 No 0 0 No -27 0.52 No 35 29.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108206389 + NM_000051 ATM 0 . . . 1.04 76.02 19 4.54 No 30 -3.22 No 0 0 No -18 0.8 Yes 49 44.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108098115 + NM_000051 ATM 0 . . . 2.77 76.71 12 4.24 No 46 0.67 No 0 0 No -44 0.86 Yes 54 34.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131956594 + NM_005732 RAD50 0 . . . 2.37 80.37 22 4.9 No 47 -2.48 No 0 0 No -21 0.34 No 45 72.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69136169 + NM_133509 RAD51B 0 . . . 2.15 73.25 26 5.2 No 45 -1.6 No 0 0 No -25 0.88 Yes 50 41.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68354643 + NM_133509 RAD51B 0 . . . 5.42 85.74 32 6.8 Yes 40 0.63 No 0 0 No -31 0.88 Yes 44 51.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68787661 + NM_004360 CDH1 0 . . . 6.38 86.56 30 6.11 Yes 3 0.21 No 0 0 No -29 0.77 Yes 51 56.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68534768 + NM_133509 RAD51B 0 . . . 2.81 81.3 20 6.05 Yes 26 0.47 No 0 0 No -28 0.53 No 48 94.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190706242 + NM_000534 PMS1 0 . . . 8.13 90.46 33 6.9 Yes 8 0.73 No 0 0 No -32 0.77 Yes 46 69.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68546704 + NM_133509 RAD51B 0 . . . 2.77 70.03 27 5.39 No 37 0.48 No 0 0 No -26 0.66 No 48 52.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89632427 + NM_000314 PTEN 0 . . . 0.39 0 17 4.07 No 15 1.14 Yes 0 0 No -27 0.84 Yes 28 49.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48024756 + NM_000179 MSH6 0 . . . 4.9 72.93 46 4.38 No 71 1.14 Yes 0 0 No -32 0.38 No 45 39.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68760858 + NM_133509 RAD51B 0 . . . 4.91 75.55 11 4.12 No 54 0.83 Yes 0 0 No -23 0.7 Yes 30 67.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47646535 + NM_000251 MSH2 0 . . . 1.18 71.79 37 7.3 Yes 10 0.46 No 0 0 No -36 0.66 No 48 66.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131944878 + NM_005732 RAD50 0 . . . 0.18 67.14 23 5.29 No 76 0.14 No 0 0 No -22 0.87 Yes 63 22.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68367057 + NM_133509 RAD51B 0 . . . 1.96 70.33 23 4.41 No 38 -3.07 No 0 0 No -37 0.82 Yes 51 62.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152365936 - NM_005431 XRCC2 0 . . . 5.13 78.74 25 6.49 Yes -3 0.78 Yes 0 0 No -27 0.67 Yes 46 42.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68664151 + NM_133509 RAD51B 0 . . . 5.71 0 14 5.56 Yes 60 0.97 Yes 0 0 No -32 0.37 No 49 55.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131965305 + NM_005732 RAD50 0 . . . 3.73 68.42 40 6.28 Yes 16 0.33 No 0 0 No -24 0.69 Yes 42 74.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37069923 + NM_000249 MLH1 0 . . . 2.18 66.1 15 5.61 Yes 66 -2.12 No 0 0 No -29 0.32 No 29 39.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108164818 + NM_000051 ATM 0 . . . 0.11 55.27 18 7 Yes 64 -4.38 No 0 0 No -17 0.46 No 49 17.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47657534 + NM_000251 MSH2 0 . . . 0.77 0 54 7.67 Yes 7 1.42 Yes 0 0 No -29 0.65 No 34 65.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131909858 + NM_005732 RAD50 0 . . . 6.49 70.58 49 8.83 Yes 19 0.35 No 0 0 No -32 0.6 No 39 63.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68440020 + NM_133509 RAD51B 0 . . . 6.43 85.89 21 5.67 Yes 3 0.03 No 0 0 No -24 0.76 Yes 46 57.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6026222 - NM_000535 PMS2 0 . . . 2.63 84.22 12 5.15 No 33 1.12 Yes 0 0 No -11 0.47 No 50 49.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68911502 + NM_133509 RAD51B 0 . . . 0.23 63.3 22 4.82 No 33 -1.93 No 0 0 No -21 0.71 Yes 49 41.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6031163 - NM_000535 PMS2 0 . . . 9.73 93.81 18 4.9 No 75 0.9 Yes 0 0 No -24 0.6 No 48 79.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47636621 + NM_000251 MSH2 0 . . . 3.25 83.16 15 4.58 No 20 2.07 Yes 0 0 No -32 0.31 No 50 79.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37071695 + NM_000249 MLH1 0 . . . 4.34 75.77 21 5.19 No 74 0.25 No 0 0 No -50 0.63 No 38 58.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108116972 + NM_000051 ATM 0 . . . 0.02 69.3 36 6.07 Yes -1 0.23 No 0 0 No -35 0.87 Yes 48 53.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48036056 + NM_000179 MSH6 0 . . . 0.72 0 21 4.89 No 63 -0.78 No 0 0 No -20 0.85 Yes 11 80.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94185621 - NM_005591 MRE11 0 . . . 4.73 71.37 20 4.08 No -4 0.79 Yes 0 0 No -24 0.78 Yes 45 73.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1213182 + NM_000455 STK11 0 . . . 4.02 80.12 20 5.06 No 9 1.23 Yes 0 0 No -19 0.43 No 49 91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69136146 + NM_133509 RAD51B 0 . . . 0.14 63.42 34 5.97 Yes 22 -1.55 No 0 0 No -33 0.59 No 56 36.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47684752 + NM_000251 MSH2 0 . . . 5.03 78.5 29 5.92 Yes 6 1.3 Yes 0 0 No -28 0.75 Yes 52 91.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68427114 + NM_133509 RAD51B 0 . . . 6.65 81.82 25 5.45 No 4 1.04 Yes 0 0 No -27 0.66 No 36 75.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108170019 + NM_000051 ATM 0 . . . 2.87 66.26 17 4.58 No 44 0.78 Yes 0 0 No -17 0.64 No 46 75.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215653581 - NM_000465 BARD1 0 . . . 2.74 67.55 14 5 No 30 0.19 No 0 0 No -18 0.71 Yes 38 88.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47703025 + NM_000251 MSH2 0 . . . 4.59 79.17 17 4.69 No 21 1.14 Yes 0 0 No -16 0.31 No 37 70.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32891648 + NM_000059 BRCA2 0 . . . 6.86 75.75 40 5.34 No 21 0.29 No 0 0 No -39 0.53 No 37 59.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89721717 + NM_000314 PTEN 0 . . . 8.51 82.04 28 6.33 Yes 8 0.2 No 0 0 No -27 0.4 No 33 52.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68338845 + NM_133509 RAD51B 0 . . . 0.76 67.02 43 5.07 No 68 1.57 Yes 0 0 No -36 0.42 No 53 22.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32903978 + NM_000059 BRCA2 0 . . . 4.43 81.86 48 7.15 Yes 5 0.82 Yes 0 0 No -47 0.9 Yes 36 59.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68635719 + NM_133509 RAD51B 0 . . . 1.66 77.54 27 5.2 No 38 0.18 No 0 0 No -26 0.65 No 52 36.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131955116 + NM_005732 RAD50 0 . . . 6.72 77.26 30 6.48 Yes 39 0.32 No 0 0 No -29 0.97 Yes 40 55.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69112969 + NM_133509 RAD51B 0 . . . 2.73 76.58 30 5.07 No 22 1.06 Yes 0 0 No -27 0.46 No 36 48.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68496960 + NM_133509 RAD51B 0 . . . 2.37 0 21 4.8 No 12 0.07 No 0 0 No -20 0.94 Yes 46 80.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69021977 + NM_133509 RAD51B 0 . . . 3.35 79.6 28 5.48 No 68 1.48 Yes 0 0 No -27 0.86 Yes 36 95.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131897420 + NM_005732 RAD50 0 . . . 3.92 73.14 27 4.73 No 74 2.06 Yes 0 0 No -21 0.55 No 36 57.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1205332 + NM_000455 STK11 0 . . . 6.12 74.63 17 5.19 No 2 1.54 Yes 0 0 No -28 0.78 Yes 18 40.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68464906 + NM_133509 RAD51B 0 . . . 9.16 83.82 21 6.23 Yes 5 1.47 Yes 0 0 No -32 0.79 Yes 45 55.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68994745 + NM_133509 RAD51B 0 . . . 4.64 83.84 15 4.58 No 53 0.66 No 0 0 No -47 0.32 No 43 28.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59879820 - NM_032043 BRIP1 0 . . . 6.62 79.63 18 4.7 No 35 0.41 No 0 0 No -39 0.52 No 37 77.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68700482 + NM_133509 RAD51B 0 . . . 0.93 80.97 26 5.21 No 57 -1.6 No 0 0 No -25 0.54 No 13 51.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108100620 + NM_000051 ATM 0 . . . 5.28 86.39 19 5.56 Yes 35 1.39 Yes 0 0 No -24 0.52 No 42 62.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190679258 + NM_000534 PMS1 0 . . . 1.13 64.91 15 5.27 No 43 0.41 No 0 0 No -14 0.44 No 42 71.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104175455 - NM_001100119 XRCC3 0 . . . 9.66 86.11 30 5.38 No 52 2.08 Yes 0 0 No -29 0.7 Yes 53 58.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23627903 - NM_024675 PALB2 0 . . . 0.9 68.18 23 6.08 Yes 61 0.57 No 0 0 No -23 0.54 No 30 37.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68626925 + NM_133509 RAD51B 0 . . . 0.59 79.22 21 4.97 No 33 1.09 Yes 0 0 No -20 0.59 No 25 62.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32895666 + NM_000059 BRCA2 0 . . . 2.14 69.33 15 5.45 No 11 0.7 No 0 0 No -25 0.54 No 47 85.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68519456 + NM_133509 RAD51B 0 . . . 1.81 80.65 15 4.58 No 76 1.48 Yes 0 0 No -21 0.42 No 51 46.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41003103 + NM_001164269 RAD51 0 . . . 1.04 80.58 26 4.63 No 45 0.84 Yes 0 0 No -25 0.42 No 13 69.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59756407 - NM_032043 BRIP1 0 . . . 3.06 69.54 30 5.88 Yes 70 -3.2 No 0 0 No -25 0.47 No 41 60.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69096007 + NM_133509 RAD51B 0 . . . 3.83 0 26 7.1 Yes 72 1.37 Yes 0 0 No -25 0.92 Yes 43 63.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41249950 - NM_007294 BRCA1 0 . . . 1.62 0 28 6.57 Yes 52 0.3 No 0 0 No -21 0.38 No 41 31.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47702976 + NM_000251 MSH2 0 . . . 2.51 63.64 24 4.16 No 21 -0.81 No 0 0 No -23 0.47 No 37 85.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68469372 + NM_133509 RAD51B 0 . . . 6.12 77.48 19 5.74 Yes 26 0.43 No 0 0 No -26 0.52 No 44 72.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68453400 + NM_133509 RAD51B 0 . . . 1.4 63.04 25 5.39 No 23 0.62 No 0 0 No -24 0.75 Yes 46 71.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90970513 - NM_002485 NBN 0 . . . 4.62 86.1 27 7 Yes -3 0.32 No 0 0 No -26 0.81 Yes 45 56.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56791390 + NM_058216 RAD51C 0 . . . 8.06 87.73 29 7.35 Yes 45 1.41 Yes 0 0 No -28 0.9 Yes 13 81.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32937647 + NM_000059 BRCA2 0 . . . 3.95 72.71 30 5.39 No 61 0.77 No 0 0 No -29 0.64 No 49 87.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59774181 - NM_032043 BRIP1 0 . . . 3.59 79.6 42 6.37 Yes 73 1.16 Yes 0 0 No -23 0.5 No 53 59.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21974195 - NM_000077 CDKN2A 0 . . . 2 72.85 22 4.09 No 55 -4.98 No 0 0 No -21 0.46 No 42 49.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68801282 + NM_004360 CDH1 0 . . . 7.16 85.02 20 7.14 Yes 7 1.29 Yes 0 0 No -19 0.73 Yes 51 91.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59904278 - NM_032043 BRIP1 0 . . . 1.23 67.39 29 5.38 No 27 -1.66 No 0 0 No -28 0.94 Yes 46 35.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215647136 - NM_000465 BARD1 0 . . . 1.13 73.45 23 4.53 No -1 0.17 No 0 0 No -22 0.43 No 41 56.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89707039 + NM_000314 PTEN 0 . . . 4.58 72.99 22 5.29 No 16 1.15 Yes 0 0 No -21 0.46 No 42 79.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32890883 + NM_000059 BRCA2 0 . . . 0.98 62.85 18 4.89 No 64 0.13 No 0 0 No -21 0.59 No 42 14.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69112619 + NM_133509 RAD51B 0 . . . 6.06 78 19 5.17 No 20 0.05 No 0 0 No -24 0.39 No 35 69.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68885162 + NM_133509 RAD51B 0 . . . 10.63 90.13 55 6.72 Yes 9 0.78 Yes 0 0 No -24 0.48 No 35 61.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56770551 + NM_058216 RAD51C 0 . . . 5.58 78.49 48 5.9 Yes 5 1.2 Yes 0 0 No -30 0.45 No 53 44.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68482111 + NM_133509 RAD51B 0 . . . 1.7 59.28 18 4.89 No 45 -4.71 No 0 0 No -24 0.6 No 50 46.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47715139 + NM_000251 MSH2 0 . . . 4.62 83.31 16 5.1 No 34 1.39 Yes 0 0 No -21 0.5 No 37 63.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108099098 + NM_000051 ATM 0 . . . 3.93 79.77 26 4.04 No 0 0.06 No 0 0 No -25 0.67 Yes 49 29.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105205565 + NM_021930 RINT1 0 . . . 0.28 70.43 21 5.02 No 21 -3.17 No 0 0 No -45 0.51 No 49 33.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56812495 + NM_058216 RAD51C 0 . . . 3.47 78.28 25 4.21 No 60 1.05 Yes 0 0 No -24 0.8 Yes 52 67.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68711666 + NM_133509 RAD51B 0 . . . 3.57 64.23 15 4.54 No 0 0.6 No 0 0 No -34 0.62 No 38 43.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68854278 + NM_004360 CDH1 0 . . . 3.01 0 28 5.77 Yes 31 1.52 Yes 0 0 No -27 0.65 No 46 47.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33429903 - NM_002878 RAD51D 0 . . . 8.78 74.05 35 7.05 Yes 9 1.72 Yes 0 0 No -34 0.73 Yes 49 72.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847196 + NM_133509 RAD51B 0 . . . 1.19 0 18 4.57 No 16 0.29 No 0 0 No -23 0.33 No 42 76.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68811936 + NM_004360 CDH1 0 . . . 1.13 73.61 25 6.64 Yes 61 1.55 Yes 0 0 No -32 0.39 No 44 33.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69144455 + NM_133509 RAD51B 0 . . . 1.31 76.2 41 4.74 No 66 0.17 No 0 0 No -33 0.9 Yes 50 52.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56787830 + NM_058216 RAD51C 0 . . . 2.1 77.43 22 5.53 No 58 -4.02 No 0 0 No -21 0.59 No 48 48.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108153963 + NM_000051 ATM 0 . . . 0.63 49.53 15 5.05 No 16 0.4 No 0 0 No -28 0.51 No 35 65.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6032676 - NM_000535 PMS2 0 . . . 6.45 80.63 23 4.87 No 49 0.76 No 0 0 No -53 0.45 No 47 89.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68405787 + NM_133509 RAD51B 0 . . . 2.82 71.72 45 7.61 Yes 45 -4.46 No 0 0 No -44 0.88 Yes 42 42.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68652186 + NM_133509 RAD51B 0 . . . 2.62 83.07 26 3.88 No 15 0.74 No 0 0 No -21 0.87 Yes 47 47.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68832989 + NM_004360 CDH1 0 . . . 3.98 80.46 30 7.9 Yes 56 1.16 Yes 0 0 No -32 0.56 No 41 76.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131949737 + NM_005732 RAD50 0 . . . 2.5 69.59 28 5.38 No -3 0.72 No 0 0 No -43 0.49 No 45 67.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215619110 - NM_000465 BARD1 0 . . . 3.57 68.49 20 4.79 No 15 0.23 No 0 0 No -37 0.88 Yes 42 69.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68956977 + NM_133509 RAD51B 0 . . . 1.59 77.76 21 5.09 No 44 0.34 No 0 0 No -20 0.74 Yes 41 72.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108201535 + NM_000051 ATM 0 . . . 7.75 82.91 32 5.92 Yes 54 -3.67 No 0 0 No -28 0.6 No 44 73.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52445445 - NM_004656 BAP1 0 . . . 7.12 85.79 15 4.64 No 67 0.18 No 0 0 No -30 0.75 Yes 46 51.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68936047 + NM_133509 RAD51B 0 . . . 2.18 75.64 30 5.64 Yes 72 0.65 No 0 0 No -29 0.79 Yes 48 36.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108190510 + NM_000051 ATM 0 . . . 6.48 83.43 20 4.47 No 11 0.93 Yes 0 0 No -19 0.59 No 43 83.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68593219 + NM_133509 RAD51B 0 . . . 1.75 59.46 21 5 No 5 0.01 No 0 0 No -20 0.91 Yes 53 44.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90953131 - NM_002485 NBN 0 . . . 6.76 89.45 19 4.86 No 45 0.71 No 0 0 No -21 0.56 No 47 51.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59884615 - NM_032043 BRIP1 0 . . . 5.24 82.33 22 5.29 No 42 0.82 Yes 0 0 No -21 0.89 Yes 40 66.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68849654 + NM_004360 CDH1 0 . . . 1.7 74.59 73 8.07 Yes 30 -2.78 No 0 0 No -26 0.4 No 53 42.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33432123 - NM_002878 RAD51D 0 . . . 7.89 85.2 34 7.68 Yes 17 1.11 Yes 0 0 No -33 0.6 No 41 59.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89702965 + NM_000314 PTEN 0 . . . 10.53 85.46 25 4.93 No 7 1.46 Yes 0 0 No -24 0.9 Yes 41 47.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68704988 + NM_133509 RAD51B 0 . . . 2.51 71.82 25 6.16 Yes 70 -3.27 No 0 0 No -24 0.87 Yes 45 79.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59918770 - NM_032043 BRIP1 0 . . . 0.17 75.83 23 4.58 No 36 0.77 Yes 0 0 No -22 0.6 No 39 89.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59903989 - NM_032043 BRIP1 0 . . . 8.86 87.64 49 7.91 Yes 8 1.29 Yes 0 0 No -42 0.67 Yes 50 65.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47678475 + NM_000251 MSH2 0 . . . 3.65 67.91 20 5.74 Yes 68 -3.38 No 0 0 No -19 0.58 No 41 41.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37037359 + NM_000249 MLH1 0 . . . 6.14 88.42 29 6.81 Yes 47 1.39 Yes 0 0 No -28 0.69 Yes 11 80.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59837215 - NM_032043 BRIP1 0 . . . 0.52 62.55 15 4.58 No 59 -1.76 No 0 0 No -19 0.66 No 13 36.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32894940 + NM_000059 BRCA2 0 . . . 3.92 80.04 40 5.03 No 26 0.3 No 0 0 No -34 0.94 Yes 50 52.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68709266 + NM_133509 RAD51B 0 . . . 6.62 71.32 36 6.04 Yes 41 1.18 Yes 0 0 No -23 0.86 Yes 44 82.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59922264 - NM_032043 BRIP1 0 . . . 1.27 75.11 23 5.2 No 41 0.78 Yes 0 0 No -25 0.72 Yes 17 67.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59789524 - NM_032043 BRIP1 0 . . . 3.69 75.27 27 5.26 No 9 0.77 No 0 0 No -26 0.73 Yes 49 76.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68390509 + NM_133509 RAD51B 0 . . . 2.16 0 14 5.28 No 64 1.24 Yes 0 0 No -21 0.55 No 49 57.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69078243 + NM_133509 RAD51B 0 . . . 2.48 76.68 30 5.57 Yes 60 0.56 No 0 0 No -29 0.75 Yes 28 71.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68987519 + NM_133509 RAD51B 0 . . . 2.72 73.98 26 5.37 No 61 -2.85 No 0 0 No -25 0.55 No 36 75.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89726448 + NM_000314 PTEN 0 . . . 4.42 73.99 24 5.01 No 21 0.89 Yes 0 0 No -24 0.87 Yes 42 86.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37074750 + NM_000249 MLH1 0 . . . 10.12 86.19 36 6.07 Yes 27 2.01 Yes 0 0 No -36 0.47 No 49 83.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48014745 + NM_000179 MSH6 0 . . . 4.77 68.42 31 5.48 No 70 -5.7 No 0 0 No -19 0.59 No 46 36.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94212288 - NM_005591 MRE11 0 . . . 0.5 76.39 15 5.04 No 11 1.24 Yes 0 0 No -35 0.88 Yes 40 88.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47765881 + NM_000251 MSH2 0 . . . 1.86 69.25 32 5.9 Yes 71 -5.27 No 0 0 No -31 0.52 No 50 58.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131948811 + NM_005732 RAD50 0 . . . 10.37 86.77 17 5.57 Yes 6 1.04 Yes 0 0 No -16 0.72 Yes 47 76.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68779685 + NM_133509 RAD51B 0 . . . 0.47 70.42 22 6.36 Yes 50 0.83 Yes 0 0 No -22 0.24 No 32 54.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59844576 - NM_032043 BRIP1 0 . . . 4.13 74.61 22 4.69 No 47 0.81 Yes 0 0 No -21 0.62 No 34 57.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32945769 + NM_000059 BRCA2 0 . . . 1.87 0 25 5.86 Yes 52 -4.52 No 0 0 No -24 0.67 Yes 48 96.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47749501 + NM_000251 MSH2 0 . . . 5.29 83.77 21 5.65 Yes 60 -3.14 No 0 0 No -20 0.8 Yes 44 81.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69090781 + NM_133509 RAD51B 0 . . . 0.18 73.6 15 4.06 No 53 0.79 Yes 0 0 No -21 0.28 No 51 54.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69076515 + NM_133509 RAD51B 0 . . . 0.69 71.67 42 6.61 Yes 43 1.53 Yes 0 0 No -25 0.45 No 15 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68781442 + NM_133509 RAD51B 0 . . . 1.62 65.56 27 6.13 Yes 14 0.04 No 0 0 No -26 0.58 No 44 95.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94172657 - NM_005591 MRE11 0 . . . 1.45 67.7 23 6.48 Yes 74 0.58 No 0 0 No -22 0.74 Yes 52 68.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7586177 - NM_000546 TP53 0 . . . 0.29 75.59 22 5.69 Yes 50 1.46 Yes 0 0 No -27 0.6 No 40 51.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21982342 - NM_000077 CDKN2A 0 . . . 4.3 64.32 15 4.12 No 28 0.18 No 0 0 No -29 0.68 Yes 40 55.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75513393 - NM_001040108 MLH3 0 . . . 2.77 81.09 45 7.96 Yes 10 0.04 No 0 0 No -44 0.64 No 51 49.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47709269 + NM_000251 MSH2 0 . . . 0.66 64.73 53 7.12 Yes 69 -4.56 No 0 0 No -31 0.49 No 21 38.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94160677 - NM_005591 MRE11 0 . . . 1.08 70.41 13 4.48 No 71 1.12 Yes 0 0 No -21 0.53 No 59 40.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84391508 - NM_139076 FAM175A 0 . . . 2.09 0 15 5.43 No 68 0.51 No 0 0 No -23 0.7 Yes 46 30.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32911503 + NM_000059 BRCA2 0 . . . 2.61 76.78 29 6.82 Yes 68 -5.08 No 0 0 No -28 0.9 Yes 49 94.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89689422 + NM_000314 PTEN 0 . . . 2.36 68.64 20 6.44 Yes 38 0.99 Yes 0 0 No -26 0.5 No 46 55.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90997202 - NM_002485 NBN 0 . . . 2.89 67.25 37 5.39 No 17 0.5 No 29 0.81 Yes -25 0.57 No 41 80.32 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 108188564 + NM_000051 ATM 0 . . . 9.53 86 25 4.74 No 12 0.38 No 0 0 No -24 0.84 Yes 46 54.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68744944 + NM_133509 RAD51B 0 . . . 5.46 83.57 20 4.9 No 11 0.46 No 0 0 No -19 0.9 Yes 47 78.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41216583 - NM_007294 BRCA1 0 . . . 6.11 77.72 37 7.41 Yes 4 0.85 Yes 0 0 No -36 0.75 Yes 34 31.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21973323 - NM_000077 CDKN2A 0 . . . 1.65 66.04 24 4.39 No 38 0.02 No 0 0 No -23 0.46 No 36 51.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68861218 + NM_004360 CDH1 0 . . . 2.09 81.53 33 4.29 No 45 0.2 No 0 0 No -26 0.65 No 49 35.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68986813 + NM_133509 RAD51B 0 . . . 4.69 83.7 35 5.83 Yes 64 -4.62 No 0 0 No -25 0.27 No 33 38.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89632468 + NM_000314 PTEN 0 . . . 1.22 79.09 29 3.99 No 56 1.12 Yes 0 0 No -28 0.47 No 49 69.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75500512 - NM_001040108 MLH3 0 . . . 1.88 67.14 21 4.96 No 61 0.57 No 0 0 No -21 0.41 No 45 30.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68583381 + NM_133509 RAD51B 0 . . . 2.05 0 28 5.38 No 50 0.38 No 0 0 No -27 0.67 Yes 47 54.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68369838 + NM_133509 RAD51B 0 . . . 5.15 71.34 12 4.2 No 23 1.62 Yes 0 0 No -24 0.52 No 40 58.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68411144 + NM_133509 RAD51B 0 . . . 6.45 82.53 24 5.48 No 4 0.62 No 0 0 No -23 0.59 No 30 70.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52436009 - NM_004656 BAP1 0 . . . 5.44 80.02 21 4.98 No NA NA NA 0 0 No -20 0.73 Yes 47 49.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90950372 - NM_002485 NBN 0 . . . 1.28 70.02 43 7.32 Yes 59 0.99 Yes 0 0 No -43 0.6 No 49 45.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89694211 + NM_000314 PTEN 0 . . . 4.07 78.35 24 5.29 No 40 1.17 Yes 0 0 No -23 0.66 Yes 38 37.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47741892 + NM_000251 MSH2 0 . . . 4.44 88.19 12 4.12 No 32 0.48 No 0 0 No -31 0.42 No 44 55.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131920571 + NM_005732 RAD50 0 . . . 9.03 83.03 27 3.95 No -4 0.73 No 0 0 No -26 0.61 No 47 42.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29126679 - NM_001005735 CHEK2 0 . . . 2.24 80.12 15 5.04 No 7 1.16 Yes 0 0 No -21 0.74 Yes 51 69.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94169416 - NM_005591 MRE11 0 . . . 3.32 73.29 24 4.69 No 3 1.41 Yes 0 0 No -26 0.73 Yes 35 58.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68329370 + NM_133509 RAD51B 0 . . . 6.65 83.39 36 5.75 Yes 40 1.03 Yes 0 0 No -30 0.37 No 45 53.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68369162 + NM_133509 RAD51B 0 . . . 0.67 55.31 18 5.29 No 25 1.43 Yes 0 0 No -28 0.78 Yes 25 48.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41005622 + NM_001164269 RAD51 0 . . . 5.2 85.02 19 5 No 5 1.09 Yes 0 0 No -18 0.5 No 44 54.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32909819 + NM_000059 BRCA2 0 . . . 3.95 85.08 13 4.75 No 53 0.68 No 0 0 No -20 0.79 Yes 47 77.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47639285 + NM_000251 MSH2 0 . . . 1.68 68.33 18 4.13 No 12 0.76 No 0 0 No -25 0.41 No 46 74.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104176350 - NM_001100119 XRCC3 0 . . . 0.19 69.42 11 4.83 No 5 -0.32 No 0 0 No -25 0.8 Yes 21 68.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47636836 + NM_000251 MSH2 0 . . . 3.26 85.6 14 5.97 Yes 28 0.96 Yes 0 0 No -29 0.71 Yes 46 61.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215591496 - NM_000465 BARD1 0 . . . 4.01 72.82 20 5.1 No 32 1.62 Yes 0 0 No -19 0.36 No 42 83.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68899125 + NM_133509 RAD51B 0 . . . 0.68 0 31 4.14 No 10 1.06 Yes 0 0 No -24 0.42 No 48 67.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69092769 + NM_133509 RAD51B 0 . . . 1.59 0 19 5.3 No 49 -4.54 No 0 0 No -22 0.74 Yes 48 43.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152374051 - NM_005431 XRCC2 0 . . . 6.26 76.43 25 5.39 No 51 -2.61 No 0 0 No -24 0.82 Yes 48 94.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131951651 + NM_005732 RAD50 0 . . . 0.45 0 19 4.9 No 18 0.49 No 23 0.74 Yes -10 0.39 No 40 67.39 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 59780472 - NM_032043 BRIP1 0 . . . 2.49 76.63 27 8.18 Yes 57 -3.64 No 0 0 No -27 0.77 Yes 39 56.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215596373 - NM_000465 BARD1 0 . . . 2.04 78.69 26 6.2 Yes 61 -3.26 No 0 0 No -26 0.87 Yes 44 62.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75514265 - NM_001040108 MLH3 0 . . . 9.7 96.9 14 3.85 No 11 0.01 No 0 0 No -44 0.75 Yes 47 95.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105201286 + NM_021930 RINT1 0 . . . 3.11 84.22 24 7.48 Yes 76 1.25 Yes 0 0 No -23 0.89 Yes 50 80.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108208594 + NM_000051 ATM 0 . . . 5.15 80.33 39 6.07 Yes -3 0.4 No 0 0 No -25 0.45 No 47 78.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108143822 + NM_000051 ATM 0 . . . 5.55 82.77 20 5.09 No 5 1.04 Yes 0 0 No -19 0.62 No 47 34.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56794762 + NM_058216 RAD51C 0 . . . 5.64 83.89 25 5.1 No 8 0.59 No 0 0 No -22 0.79 Yes 47 64.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47759837 + NM_000251 MSH2 0 . . . 4.14 84.99 33 6.24 Yes 36 0.8 Yes 0 0 No -24 0.56 No 55 45.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68812686 + NM_133509 RAD51B 0 . . . 0.9 84.73 18 4.8 No 69 1.53 Yes 0 0 No -26 0.26 No 37 48.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68633277 + NM_133509 RAD51B 0 . . . 1.12 73.61 22 4.55 No 10 0.28 No 0 0 No -22 0.41 No 48 40.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68782199 + NM_004360 CDH1 0 . . . 5.42 84.2 27 5.53 No 6 1.78 Yes 0 0 No -27 0.67 Yes 52 79.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190702688 + NM_000534 PMS1 0 . . . 0.17 57.43 23 4.98 No 14 0.38 No 0 0 No -22 0.73 Yes 41 75.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40997247 + NM_001164269 RAD51 0 . . . 2.89 77.73 55 5.45 No 8 0.73 No 0 0 No -43 0.91 Yes 39 90.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131946498 + NM_005732 RAD50 0 . . . 3.94 76.21 51 7.53 Yes 30 -3.33 No 0 0 No -25 0.85 Yes 42 39.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104175156 - NM_001100119 XRCC3 0 . . . 4.46 79.69 28 6.24 Yes 47 -0.5 No 0 0 No -27 0.75 Yes 50 56.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68576317 + NM_133509 RAD51B 0 . . . 0.77 0 25 5.57 Yes 47 -0.94 No 0 0 No -24 0.95 Yes 48 32.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68992007 + NM_133509 RAD51B 0 . . . 3.95 81.74 35 7.28 Yes 67 -1.74 No 0 0 No -34 0.65 No 50 45.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152346624 - NM_005431 XRCC2 0 . . . 8.37 82.79 21 3.08 No 67 -2.44 No 0 0 No -21 0.42 No 46 68.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68827832 + NM_133509 RAD51B 0 . . . 9.82 81.87 16 4.67 No -1 0.83 Yes 0 0 No -31 0.49 No 34 37.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75502198 - NM_001040108 MLH3 0 . . . 5.41 90.92 20 5.4 No 3 0.8 Yes 0 0 No -25 0.94 Yes 17 52.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23625097 - NM_024675 PALB2 0 . . . 3.86 79.72 28 4.35 No 31 0.55 No 0 0 No -32 0.85 Yes 49 81.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108213809 + NM_000051 ATM 0 . . . 3.95 83.05 30 5.27 No 16 0.09 No 0 0 No -22 0.71 Yes 41 83.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47768568 + NM_000251 MSH2 0 . . . 5.84 83.83 26 5.2 No 57 -4.09 No 0 0 No -25 0.53 No 41 67.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68756995 + NM_133509 RAD51B 0 . . . 3.39 0 26 4.32 No 72 1.99 Yes 0 0 No -21 0.75 Yes 49 77.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215603650 - NM_000465 BARD1 0 . . . 2.68 76.52 24 6.26 Yes 63 1.38 Yes 0 0 No -24 0.27 No 42 45.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68787771 + NM_133509 RAD51B 0 . . . 5.63 72.06 20 5.57 Yes 65 1.53 Yes 0 0 No -19 0.54 No 20 49.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131912216 + NM_005732 RAD50 0 . . . 6.64 78.33 38 6.32 Yes 25 1.04 Yes 0 0 No -37 0.6 No 40 83.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89656971 + NM_000314 PTEN 0 . . . 4.12 71.01 16 4.59 No 12 -0.7 No 0 0 No -20 0.54 No 46 47.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131931536 + NM_005732 RAD50 0 . . . 3.73 68.34 48 8.16 Yes 72 -1.78 No 0 0 No -47 0.53 No 51 47.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68447004 + NM_133509 RAD51B 0 . . . 4.26 69.9 20 5.1 No 21 0.44 No 0 0 No -19 0.74 Yes 41 72.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105173540 + NM_021930 RINT1 0 . . . 4.73 64.2 19 4.33 No 71 0.58 No 0 0 No -18 0.78 Yes 42 31.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68675753 + NM_133509 RAD51B 0 . . . 2.59 0 21 5.34 No 26 0.13 No 0 0 No -29 0.88 Yes 48 62.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69093371 + NM_133509 RAD51B 0 . . . 5.52 86.05 17 5.64 Yes 37 0.74 No 0 0 No -28 0.63 No 45 89.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75482103 - NM_001040108 MLH3 0 . . . 5.58 87.48 25 4.78 No 8 0.82 Yes 0 0 No -24 0.64 No 50 93.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1204539 + NM_000455 STK11 0 . . . 1.79 75.67 45 6.99 Yes 76 1.03 Yes 0 0 No -28 0.35 No 49 64.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89703871 + NM_000314 PTEN 0 . . . 5.24 71.02 28 5.37 No 59 -5.61 No 0 0 No -26 0.48 No 46 53.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94165542 - NM_005591 MRE11 0 . . . 1.14 78.09 22 4.8 No -1 0.45 No 0 0 No -21 0.97 Yes 46 67.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68682454 + NM_133509 RAD51B 0 . . . 0.64 69.31 18 4.58 No 65 -3.77 No 0 0 No -17 0.74 Yes 45 50.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59781685 - NM_032043 BRIP1 0 . . . 1.51 71.82 16 5.45 No 72 0.67 No 0 0 No -28 0.67 Yes 36 53.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215599690 - NM_000465 BARD1 0 . . . 8.65 87.43 25 5.38 No 9 1.64 Yes 0 0 No -24 0.92 Yes 49 79.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68820501 + NM_004360 CDH1 0 . . . 5.28 91.25 20 3.32 No 26 -1.67 No 0 0 No -15 0.46 No 54 36.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68296907 + NM_133509 RAD51B 0 . . . 1.04 73.55 10 5 No 7 0 No 0 0 No -20 0.32 No 42 64.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68977717 + NM_133509 RAD51B 0 . . . 7.34 75.12 13 6.28 Yes 49 -1.89 No 0 0 No -24 0.62 No 45 55.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68441036 + NM_133509 RAD51B 0 . . . 2.44 60.07 20 5.05 No 23 0.44 No 0 0 No -19 0.75 Yes 35 49.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68975288 + NM_133509 RAD51B 0 . . . 4.58 80.15 20 5.74 Yes 33 0.47 No 0 0 No -27 0.75 Yes 48 87.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47801861 + NM_000251 MSH2 0 . . . 0.98 73.37 25 4.03 No 47 0.79 Yes 0 0 No -34 0.27 No 52 44.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68423610 + NM_133509 RAD51B 0 . . . 5.32 80.73 17 4.7 No 7 0.41 No 0 0 No -27 0.7 Yes 51 84.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40999290 + NM_001164269 RAD51 0 . . . 0.51 69.48 21 4.23 No 59 1.46 Yes 0 0 No -26 0.72 Yes 42 84.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47723100 + NM_000251 MSH2 0 . . . 2.97 77.73 23 7.07 Yes 11 0.57 No 0 0 No -29 0.51 No 47 92.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68714618 + NM_133509 RAD51B 0 . . . 0.46 75.1 14 4.84 No 68 -6.2 No 0 0 No -18 0.46 No 53 66.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108117747 + NM_000051 ATM 0 . . . 2.97 65.32 28 5.38 No 61 0.27 No 0 0 No -42 0.46 No 47 67.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75509234 - NM_001040108 MLH3 0 . . . 2.7 76.22 18 5.29 No 73 1.29 Yes 0 0 No -24 0.67 Yes 50 74.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45806635 - NM_001048171 MUTYH 0 . . . 0.9 75.44 33 8.82 Yes 20 0.19 No 0 0 No -22 0.55 No 46 56.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33441798 - NM_002878 RAD51D 0 . . . 0.7 57.27 25 4.26 No 17 0.34 No 0 0 No -25 0.76 Yes 41 81.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68348494 + NM_133509 RAD51B 0 . . . 8.18 76.83 52 7.74 Yes 9 1.29 Yes 0 0 No -33 0.64 No 35 63.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41015525 + NM_001164269 RAD51 0 . . . 2.39 69.56 26 4.99 No 14 -2.75 No 0 0 No -25 0.44 No 36 46.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108209349 + NM_000051 ATM 0 . . . 3.77 79.46 25 5 No 63 -4.62 No 0 0 No -29 0.31 No 48 71.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37084996 + NM_000249 MLH1 0 . . . 3.75 72.94 28 4.83 No 23 1.59 Yes 0 0 No -28 0.58 No 45 70.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68956825 + NM_133509 RAD51B 0 . . . 4.15 78.76 25 4.43 No 60 0.87 Yes 0 0 No -24 0.93 Yes 40 59.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105182618 + NM_021930 RINT1 0 . . . 5.07 82.11 24 6.1 Yes 9 0.33 No 0 0 No -23 0.84 Yes 49 78.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59777323 - NM_032043 BRIP1 0 . . . 5.35 83.55 19 5.38 No 63 -3.66 No 0 0 No -18 0.75 Yes 47 63.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68607229 + NM_133509 RAD51B 0 . . . 0.89 77.34 25 5.53 No 22 0.58 No 0 0 No -24 0.8 Yes 48 53.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152347622 - NM_005431 XRCC2 0 . . . 6.63 85.01 32 7.07 Yes 56 0.52 No 0 0 No -31 0.6 No 51 82.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75519917 - NM_001040108 MLH3 0 . . . 3.12 66.48 32 4.85 No 71 -2.39 No 0 0 No -31 0.48 No 46 96.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47786565 + NM_000251 MSH2 0 . . . 4.71 82.03 12 5.83 Yes 20 1.03 Yes 0 0 No -32 0.44 No 38 93.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131981259 + NM_005732 RAD50 0 . . . 3.93 83.81 17 4.36 No 50 1.39 Yes 0 0 No -16 0.76 Yes 48 59.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89676012 + NM_000314 PTEN 0 . . . 1.66 70.51 15 4.58 No 2 0.7 No 0 0 No -22 0.88 Yes 50 51.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152350059 - NM_005431 XRCC2 0 . . . 6.99 76.88 23 4.69 No 47 -3.66 No 0 0 No -46 0.59 No 41 64.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190692952 + NM_000534 PMS1 0 . . . 1.52 76.34 14 4.88 No 60 1.68 Yes 0 0 No -26 0.39 No 50 55.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33438408 - NM_002878 RAD51D 0 . . . 9.31 88.27 23 5.39 No 16 -0.05 No 0 0 No -58 0.41 No 48 72.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190670599 + NM_000534 PMS1 0 . . . 0.89 72.71 42 7.36 Yes 74 0.26 No 0 0 No -27 0.65 No 37 30.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68673527 + NM_133509 RAD51B 0 . . . 3.97 84.41 31 4.18 No 42 0.97 Yes 0 0 No -25 0.55 No 43 78.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47740588 + NM_000251 MSH2 0 . . . 7.97 75.46 17 5.91 Yes 3 2.48 Yes 0 0 No -28 0.57 No 48 67.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68839247 + NM_133509 RAD51B 0 . . . 3.7 68.62 9 5.29 No 21 0.04 No 0 0 No -22 0.63 No 50 30.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68894909 + NM_133509 RAD51B 0 . . . 0.1 0 22 5.29 No 35 0.14 No 0 0 No -21 0.41 No 44 56.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89715780 + NM_000314 PTEN 0 . . . 0.46 66.78 16 4.42 No 35 0.18 No 0 0 No -23 0.33 No 46 25.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68933310 + NM_133509 RAD51B 0 . . . 9.21 86.08 14 4.79 No 9 1.4 Yes 0 0 No -34 0.34 No 49 95.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89699211 + NM_000314 PTEN 0 . . . 0.5 0 16 5.66 Yes 45 0.98 Yes 0 0 No -20 0.56 No 13 38.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68799189 + NM_133509 RAD51B 0 . . . 2.95 74.17 30 5.47 No 3 0.61 No 0 0 No -25 0.75 Yes 51 28.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47795665 + NM_000251 MSH2 0 . . . 0.12 62.91 32 7.5 Yes 30 -3.93 No 0 0 No -31 0.65 No 11 24.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59937620 - NM_032043 BRIP1 0 . . . 2 70.17 22 4.56 No 19 -1.62 No 0 0 No -21 0.52 No 39 80.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47778418 + NM_000251 MSH2 0 . . . 2.79 0 33 7.31 Yes 29 -0.65 No 0 0 No -32 0.6 No 50 54.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68487156 + NM_133509 RAD51B 0 . . . 7.81 84.65 22 4.74 No 4 0.89 Yes 0 0 No -25 0.78 Yes 37 76.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152363563 - NM_005431 XRCC2 0 . . . 1.11 77.71 18 5.92 Yes 4 0.1 No 0 0 No -28 0.78 Yes 54 89.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48024324 + NM_000179 MSH6 0 . . . 0.69 76.12 32 5.92 Yes 66 0.59 No 0 0 No -31 0.81 Yes 55 57.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68299447 + NM_133509 RAD51B 0 . . . 2.6 79.09 15 4.58 No 41 0.65 No 0 0 No -58 0.34 No 45 93.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41273291 - NM_007294 BRCA1 0 . . . 2.87 84.22 24 5.27 No 33 1.04 Yes 0 0 No -26 0.54 No 50 71.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68771476 + NM_004360 CDH1 0 . . . 0.99 0 19 4.19 No 12 1.12 Yes 0 0 No -18 0.32 No 46 91.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41018486 + NM_001164269 RAD51 0 . . . 8.48 92.53 17 5.52 No 3 0.86 Yes 0 0 No -23 0.53 No 43 59.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89687681 + NM_000314 PTEN 0 . . . 5.09 72.05 36 6.79 Yes 44 0.02 No 0 0 No -35 0.92 Yes 41 55.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131905341 + NM_005732 RAD50 0 . . . 5.73 77.75 24 5.19 No -2 0.26 No 0 0 No -23 0.66 No 42 92.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68604571 + NM_133509 RAD51B 0 . . . 2.62 72.75 49 6.93 Yes 17 2.07 Yes 0 0 No -33 0.47 No 41 88.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68526475 + NM_133509 RAD51B 0 . . . 9.63 96.09 30 5.47 No 62 0.87 Yes 0 0 No -29 0.78 Yes 45 60.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94161318 - NM_005591 MRE11 0 . . . 4.9 78.04 24 4.9 No 60 1.04 Yes 0 0 No -23 0.86 Yes 44 58.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23618970 - NM_024675 PALB2 0 . . . 1.84 67.91 24 5.85 Yes 70 -2.58 No 0 0 No -23 0.43 No 44 57.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84397272 - NM_139076 FAM175A 0 . . . 7.87 84.76 49 8.78 Yes 58 1.46 Yes 0 0 No -35 0.73 Yes 43 91.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68777844 + NM_133509 RAD51B 0 . . . 2.58 67.13 16 4.17 No 59 -5.11 No 0 0 No -15 0.52 No 51 55.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68284606 + NM_133509 RAD51B 0 . . . 6.02 84.54 39 7.49 Yes 47 1.27 Yes 0 0 No -22 0.6 No 25 90.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68547872 + NM_133509 RAD51B 0 . . . 0.4 63.47 33 6.84 Yes 36 1.18 Yes 0 0 No -24 0.8 Yes 34 60.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32915442 + NM_000059 BRCA2 0 . . . 7.07 88.46 18 4.83 No 62 0.39 No 0 0 No -17 0.43 No 43 65.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68723244 + NM_133509 RAD51B 0 . . . 2.08 0 15 5.28 No 23 0.64 No 0 0 No -46 0.34 No 37 62.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59929462 - NM_032043 BRIP1 0 . . . 9.47 80.46 48 6.1 Yes 28 0.68 No 0 0 No -31 0.87 Yes 30 52.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152345519 - NM_005431 XRCC2 0 . . . 0.83 62.49 20 5.43 No 72 0.65 No 0 0 No -20 0.37 No 48 46.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90990810 - NM_002485 NBN 0 . . . 1.19 62.35 30 6 Yes 28 0.24 No 0 0 No -29 0.92 Yes 24 56.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68728522 + NM_133509 RAD51B 0 . . . 4.21 68.56 21 5.1 No 8 1.43 Yes 0 0 No -20 0.68 Yes 44 95.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68984680 + NM_133509 RAD51B 0 . . . 5.6 68.3 22 3.95 No 34 1.89 Yes 0 0 No -19 0.69 Yes 24 86.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69063143 + NM_133509 RAD51B 0 . . . 1 74.56 26 5.4 No 32 0.86 Yes 0 0 No -31 0.58 No 52 35.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68860666 + NM_133509 RAD51B 0 . . . 0.23 0 19 4.44 No 75 0.95 Yes 0 0 No -22 0.82 Yes 45 84.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68897908 + NM_133509 RAD51B 0 . . . 4.13 82.02 35 5.81 Yes 59 0.18 No 0 0 No -24 0.58 No 40 91.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59926284 - NM_032043 BRIP1 0 . . . 0.65 66.48 20 7.14 Yes 62 0.65 No 0 0 No -19 0.75 Yes 50 97.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68800985 + NM_133509 RAD51B 0 . . . 1.47 60.14 17 5.95 Yes -2 0.02 No 0 0 No -32 0.39 No 57 42.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21985540 - NM_000077 CDKN2A 0 . . . 7.01 91.4 25 3.7 No 10 0.66 No 0 0 No -25 0.75 Yes 48 59.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68304246 + NM_133509 RAD51B 0 . . . 1.58 78 38 6.63 Yes 27 0.47 No 0 0 No -38 0.45 No 43 34.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799091 + NM_058216 RAD51C 0 . . . 1.82 80.22 13 4.23 No 58 -3.87 No 0 0 No -17 0.39 No 47 55.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47772854 + NM_000251 MSH2 0 . . . 9.41 85.56 16 6 Yes 51 1.13 Yes 0 0 No -15 0.66 Yes 50 73.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68951564 + NM_133509 RAD51B 0 . . . 8.76 82.9 33 6.24 Yes 1 0.53 No 0 0 No -32 0.43 No 45 47.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68814388 + NM_004360 CDH1 0 . . . 3.6 85.02 21 2.92 No 4 1.2 Yes 0 0 No -25 0.52 No 45 69.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47782331 + NM_000251 MSH2 0 . . . 4.53 77.5 30 7.34 Yes 70 -4.03 No 0 0 No -29 0.93 Yes 48 55.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68941307 + NM_133509 RAD51B 0 . . . 2.77 69.34 19 5.74 Yes 58 1.47 Yes 0 0 No -18 0.61 No 46 74.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90985736 - NM_002485 NBN 0 . . . 7.27 72.51 33 6.16 Yes 44 0.46 No 0 0 No -32 0.93 Yes 36 49.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56771580 + NM_058216 RAD51C 0 . . . 4.52 77.25 31 5.64 Yes 66 0.33 No 0 0 No -30 0.7 Yes 45 48.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68801161 + NM_133509 RAD51B 0 . . . 0.59 66.71 20 5.53 No 23 0.35 No 0 0 No -30 0.54 No 44 32.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84385175 - NM_139076 FAM175A 0 . . . 4.9 85.02 34 6.32 Yes 63 1.25 Yes 0 0 No -26 0.41 No 44 44.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68615930 + NM_133509 RAD51B 0 . . . 0.54 70.53 33 4.89 No 30 0.72 No 0 0 No -26 0.68 Yes 58 38.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89703654 + NM_000314 PTEN 0 . . . 5.8 75.03 36 5.82 Yes 46 -4.79 No 0 0 No -28 0.48 No 50 72.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190716040 + NM_000534 PMS1 0 . . . 3.12 0 20 5 No 36 0.39 No 0 0 No -46 0.38 No 37 80.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108202538 + NM_000051 ATM 0 . . . 1.56 71.43 23 6.78 Yes 76 0.77 No 0 0 No -25 0.49 No 50 68.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69067010 + NM_133509 RAD51B 0 . . . 7.45 81.39 19 3.91 No 55 -2.57 No 0 0 No -31 0.49 No 31 67.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68405357 + NM_133509 RAD51B 0 . . . 3.94 77.65 21 6.7 Yes 5 0.89 Yes 0 0 No -20 0.55 No 53 79.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190679459 + NM_000534 PMS1 0 . . . 0.74 74.07 16 4.69 No 52 1.1 Yes 0 0 No -40 0.87 Yes 55 64.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69085784 + NM_133509 RAD51B 0 . . . 2.52 74.96 17 4.48 No 62 0.96 Yes 0 0 No -19 0.68 Yes 50 67.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41217727 - NM_007294 BRCA1 0 . . . 6.95 74.78 25 5.85 Yes 17 1.16 Yes 0 0 No -24 0.67 Yes 41 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89688090 + NM_000314 PTEN 0 . . . 4.65 76.57 22 5.09 No 4 1.21 Yes 0 0 No -24 0.49 No 44 54.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104162738 - NM_001100119 XRCC3 0 . . . 1.22 75.75 23 5 No 39 0.48 No 0 0 No -22 0.82 Yes 49 71.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68568197 + NM_133509 RAD51B 0 . . . 2.91 79.69 26 4.56 No 4 0.08 No 0 0 No -21 0.68 Yes 42 64.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190675293 + NM_000534 PMS1 0 . . . 3.54 71.39 27 5.2 No 47 0.95 Yes 0 0 No -26 0.44 No 41 46.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37075215 + NM_000249 MLH1 0 . . . 2.5 61.22 27 5.57 Yes 36 -1.79 No 0 0 No -26 0.95 Yes 39 43.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41276905 - NM_007294 BRCA1 0 . . . 3 77.15 53 9.22 Yes 54 1.11 Yes 0 0 No -36 0.51 No 47 50.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68444797 + NM_133509 RAD51B 0 . . . 0.26 0 30 6.84 Yes 11 0.86 Yes 0 0 No -30 0.49 No 31 40.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108137567 + NM_000051 ATM 0 . . . 5.09 80.23 57 6.54 Yes 41 0.71 No 0 0 No -26 0.89 Yes 17 43.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68520366 + NM_133509 RAD51B 0 . . . 1.87 70.67 35 6.24 Yes 16 0.98 Yes 0 0 No -35 0.71 Yes 42 75.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68810762 + NM_004360 CDH1 0 . . . 2.4 0 18 4.89 No 60 -1.78 No 0 0 No -17 0.45 No 35 79.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68949060 + NM_133509 RAD51B 0 . . . 1.98 73.9 19 7.07 Yes 68 -5.89 No 0 0 No -18 0.6 No 44 74.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68605141 + NM_133509 RAD51B 0 . . . 3.59 65.46 28 5.38 No 44 0.15 No 0 0 No -27 0.67 Yes 47 23.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47793539 + NM_000251 MSH2 0 . . . 1.44 73.05 31 5.66 Yes 68 1 Yes 0 0 No -31 0.93 Yes 25 60.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68327058 + NM_133509 RAD51B 0 . . . 1.15 62.46 41 6.39 Yes 15 0.96 Yes 0 0 No -40 0.4 No 43 77.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68886306 + NM_133509 RAD51B 0 . . . 5.23 82.23 14 6.74 Yes 1 1.02 Yes 0 0 No -21 0.67 Yes 52 77.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68973894 + NM_133509 RAD51B 0 . . . 3.75 80.17 40 7.34 Yes 9 0.7 No 0 0 No -39 0.91 Yes 42 90.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32972138 + NM_000059 BRCA2 0 . . . 3.53 0 25 5.16 No 61 0.84 Yes 0 0 No -24 0.84 Yes 43 85.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108118645 + NM_000051 ATM 0 . . . 4.35 70.45 24 5.48 No 74 0.84 Yes 0 0 No -23 0.59 No 41 77.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37051510 + NM_000249 MLH1 0 . . . 2.1 82.66 12 4.87 No 2 0.46 No 0 0 No -50 0.48 No 17 56.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68417458 + NM_133509 RAD51B 0 . . . 1.65 79.82 28 5.37 No 48 1.52 Yes 0 0 No -27 0.72 Yes 35 58.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131928021 + NM_005732 RAD50 0 . . . 1.46 75.87 32 5.11 No -2 0.13 No 0 0 No -28 0.63 No 43 82.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59868471 - NM_032043 BRIP1 0 . . . 0.36 61.86 15 4.58 No 57 1.6 Yes 0 0 No -20 0.49 No 48 32.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29097584 - NM_001005735 CHEK2 0 . . . 1.32 74.34 25 4.9 No 64 1.28 Yes 0 0 No -24 0.86 Yes 43 58.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105178311 + NM_021930 RINT1 0 . . . 8.7 83.47 27 4.7 No 28 1.12 Yes 0 0 No -26 0.79 Yes 42 89.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59772126 - NM_032043 BRIP1 0 . . . 3.35 77.47 14 5.66 Yes 66 -5.05 No 0 0 No -25 0.78 Yes 46 55.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68567217 + NM_133509 RAD51B 0 . . . 4.87 85.47 16 4.34 No -1 0.78 Yes 0 0 No -21 0.42 No 49 54.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40986292 + NM_001164269 RAD51 0 . . . 3.61 84.17 14 5.98 Yes 67 0.89 Yes 0 0 No -19 0.61 No 46 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41017305 + NM_001164269 RAD51 0 . . . 2.39 77.51 29 4.59 No 30 1.2 Yes 0 0 No -37 0.58 No 28 65.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89690893 + NM_000314 PTEN 0 . . . 0.22 68.09 45 6.93 Yes 62 -5.46 No 0 0 No -41 0.66 Yes 45 59.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68347520 + NM_133509 RAD51B 0 . . . 5.04 77.62 39 5.99 Yes 64 0.84 Yes 0 0 No -34 0.7 Yes 48 62.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68299686 + NM_133509 RAD51B 0 . . . 6.15 85.26 28 4.73 No 68 0.24 No 0 0 No -27 0.49 No 45 59.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190675326 + NM_000534 PMS1 0 . . . 4.72 80.35 12 5.1 No -1 0.34 No 0 0 No -28 0.47 No 47 55.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190670836 + NM_000534 PMS1 0 . . . 0.47 67.98 13 4.8 No 31 0.17 No 0 0 No -56 0.49 No 51 36.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33426319 - NM_002878 RAD51D 0 . . . 3.12 82.33 33 6.08 Yes 72 -1.63 No 0 0 No -32 0.4 No 50 49.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69080215 + NM_133509 RAD51B 0 . . . 3.67 84 27 5.1 No 2 1.5 Yes 0 0 No -26 0.32 No 13 54.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59914167 - NM_032043 BRIP1 0 . . . 7.41 82.91 23 5.29 No 39 0.78 Yes 0 0 No -22 0.37 No 42 57.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68744971 + NM_133509 RAD51B 0 . . . 2.96 83.18 34 7.56 Yes 38 0.44 No 0 0 No -28 0.74 Yes 47 74.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29130069 - NM_001005735 CHEK2 0 . . . 2.29 75.1 21 3.68 No 20 -2.23 No 0 0 No -26 0.54 No 50 47.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7587076 - NM_000546 TP53 0 . . . 1.27 76.63 79 8.63 Yes 71 -5.04 No 0 0 No -23 0.43 No 43 45.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68814038 + NM_133509 RAD51B 0 . . . 7.16 85.31 20 3.74 No 64 0.8 Yes 0 0 No -24 0.56 No 44 78.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75482667 - NM_001040108 MLH3 0 . . . 0.34 63.47 17 5.62 Yes 21 1.29 Yes 0 0 No -16 0.65 No 37 60.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32953088 + NM_000059 BRCA2 0 . . . 1.8 73.17 18 4.69 No 7 0.6 No 0 0 No -17 0.68 Yes 51 48.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47628722 + NM_000251 MSH2 0 . . . 2.99 0 12 5.1 No 47 -2 No 0 0 No -19 0.54 No 54 80.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90958995 - NM_002485 NBN 0 . . . 0.99 83.67 20 5.9 Yes -1 1.23 Yes 0 0 No -28 0.84 Yes 52 82.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108239172 + NM_000051 ATM 0 . . . 4.03 78.7 26 4.27 No 5 1.01 Yes 0 0 No -21 0.62 No 45 66.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108183521 + NM_000051 ATM 0 . . . 9.92 82.13 58 6.2 Yes 1 0.42 No 0 0 No -22 0.71 Yes 48 64.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131914093 + NM_005732 RAD50 0 . . . 3.82 63.76 24 9.16 Yes 32 0.32 No 0 0 No -23 0.57 No 26 60.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131965641 + NM_005732 RAD50 0 . . . 1.59 62.8 12 4.96 No 28 -2.2 No 0 0 No -24 0.49 No 41 94.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21982553 - NM_000077 CDKN2A 0 . . . 7.38 75.18 22 4.58 No -3 1.62 Yes 0 0 No -21 0.85 Yes 46 45.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68721242 + NM_133509 RAD51B 0 . . . 5.45 83.18 29 5.83 Yes 2 0.7 No 0 0 No -56 0.83 Yes 49 59.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68739834 + NM_133509 RAD51B 0 . . . 4.46 75.2 34 7.6 Yes 9 1.46 Yes 0 0 No -33 0.55 No 49 93.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68623261 + NM_133509 RAD51B 0 . . . 6.08 74.77 14 4.53 No 21 1.13 Yes 0 0 No -24 0.77 Yes 37 87.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68674053 + NM_133509 RAD51B 0 . . . 10.66 90.44 28 4.07 No 17 0.91 Yes 0 0 No -27 0.91 Yes 37 53.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90957142 - NM_002485 NBN 0 . . . 2.95 81.52 18 4.57 No 74 0.86 Yes 0 0 No -50 0.32 No 49 74.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68500164 + NM_133509 RAD51B 0 . . . 3.35 68.14 15 4.58 No 69 1.1 Yes 0 0 No -14 0.58 No 36 46.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23651936 - NM_024675 PALB2 0 . . . 5.46 0 28 6.63 Yes 24 0.29 No 0 0 No -27 0.92 Yes 45 53.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41209501 - NM_007294 BRCA1 0 . . . 3.85 84.95 23 4.69 No 56 1.65 Yes 0 0 No -20 0.33 No 17 33.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104163259 - NM_001100119 XRCC3 0 . . . 2.65 81.2 20 5.1 No 50 0.61 No 0 0 No -20 0.68 Yes 52 44.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68300452 + NM_133509 RAD51B 0 . . . 1.03 76.88 20 4.44 No 13 0.2 No 0 0 No -25 0.82 Yes 17 71.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68859933 + NM_004360 CDH1 0 . . . 4.57 87.68 28 5.26 No 36 0.94 Yes 0 0 No -27 0.48 No 22 60.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47631891 + NM_000251 MSH2 0 . . . 3.59 81.25 21 7.09 Yes 40 1.2 Yes 0 0 No -20 0.7 Yes 18 73.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68919026 + NM_133509 RAD51B 0 . . . 0.26 73.71 17 4.8 No 20 -3.28 No 0 0 No -45 0.73 Yes 50 37.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69128459 + NM_133509 RAD51B 0 . . . 5.98 74.07 18 5.74 Yes 57 -1.92 No 0 0 No -57 0.97 Yes 42 61.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68786438 + NM_133509 RAD51B 0 . . . 1.32 68.6 41 6.24 Yes 62 0.02 No 0 0 No -27 0.66 No 44 36.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68720778 + NM_133509 RAD51B 0 . . . 1.26 0 40 5.62 Yes 71 1.32 Yes 0 0 No -39 0.58 No 37 92.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59911064 - NM_032043 BRIP1 0 . . . 2.93 0 13 4.36 No 10 0.67 No 0 0 No -28 0.7 Yes 48 95.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68438782 + NM_133509 RAD51B 0 . . . 6.5 71.65 15 4.9 No 62 1.29 Yes 0 0 No -45 0.58 No 44 64.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68466158 + NM_133509 RAD51B 0 . . . 5.87 79.94 58 8.31 Yes 49 -3.49 No 0 0 No -31 0.48 No 49 68.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215595785 - NM_000465 BARD1 0 . . . 2.04 60.81 22 5.28 No 24 0.35 No 0 0 No -21 0.73 Yes 34 84.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68496624 + NM_133509 RAD51B 0 . . . 3.22 83.79 18 6.51 Yes 30 0.73 No 0 0 No -21 0.55 No 48 73.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6041879 - NM_000535 PMS2 0 . . . 1.28 0 31 4.24 No 25 0.42 No 0 0 No -26 0.24 No 37 73.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59763142 - NM_032043 BRIP1 0 . . . 4.06 75.79 30 8.12 Yes 14 0.03 No 0 0 No -29 0.88 Yes 44 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89733611 + NM_000314 PTEN 0 . . . 2.92 73.29 28 4.85 No 68 0.3 No 0 0 No -24 0.63 No 45 67.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131919599 + NM_005732 RAD50 0 . . . 2 80.34 16 5.29 No 36 1.11 Yes 0 0 No -22 0.92 Yes 22 74.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108218322 + NM_000051 ATM 0 . . . 0.63 72.11 18 4.04 No 3 0.34 No 0 0 No -18 0.49 No 36 61.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48032481 + NM_000179 MSH6 0 . . . 0.53 70.55 26 5.86 Yes 76 1.09 Yes 0 0 No -25 0.65 No 48 77.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59925291 - NM_032043 BRIP1 0 . . . 3 67.33 83 9.05 Yes 70 0.33 No 0 0 No -18 0.35 No 36 67.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68325840 + NM_133509 RAD51B 0 . . . 3.36 69.97 15 5.39 No 14 1.83 Yes 0 0 No -28 0.27 No 44 92.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59863663 - NM_032043 BRIP1 0 . . . 7.07 81.03 31 5.74 Yes 24 0.97 Yes 0 0 No -30 0.93 Yes 34 67.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59833674 - NM_032043 BRIP1 0 . . . 1.56 0 28 5.27 No 59 0.92 Yes 0 0 No -27 0.46 No 48 81.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108166247 + NM_000051 ATM 0 . . . 9.18 91.22 13 4.6 No 65 -1.42 No 0 0 No -16 0.62 No 46 57.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21992043 - NM_000077 CDKN2A 0 . . . 5.37 88.23 32 5.98 Yes 56 0.93 Yes 0 0 No -23 0.55 No 39 36.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52440113 - NM_004656 BAP1 0 . . . 3.24 65.62 20 4.81 No 22 1.82 Yes 0 0 No -19 0.41 No 36 96.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69117847 + NM_133509 RAD51B 0 . . . 0.8 74.47 25 5.39 No -1 0.64 No 0 0 No -24 0.74 Yes 51 53.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68447214 + NM_133509 RAD51B 0 . . . 2.69 72.37 22 4.8 No 6 0.31 No 0 0 No -50 0.65 No 52 86.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47638167 + NM_000251 MSH2 0 . . . 1.99 65.45 20 4.62 No 21 1.13 Yes 0 0 No -25 0.53 No 37 64.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68788505 + NM_004360 CDH1 0 . . . 0.95 64.79 18 4.9 No 69 -3.63 No 0 0 No -17 0.46 No 43 54.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190744040 + NM_000534 PMS1 0 . . . 4.64 80.64 14 4.47 No 8 1.3 Yes 0 0 No -38 0.44 No 50 77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215636127 - NM_000465 BARD1 0 . . . 3.27 74.17 20 6.25 Yes 20 -3.58 No 0 0 No -20 0.66 Yes 39 28.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68397658 + NM_133509 RAD51B 0 . . . 4.02 83.28 14 5.57 Yes 76 1.53 Yes 0 0 No -26 0.67 Yes 41 67.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68420924 + NM_133509 RAD51B 0 . . . 2.79 76.32 19 4.99 No 56 1.55 Yes 0 0 No -18 0.36 No 12 70.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37035705 + NM_000249 MLH1 0 . . . 1.6 69 21 4.67 No 45 1.01 Yes 23 0.81 Yes -24 0.95 Yes 51 36.45 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68310948 + NM_133509 RAD51B 0 . . . 3.42 76.02 25 5.93 Yes 40 0.73 No 0 0 No -24 0.88 Yes 18 40.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41001314 + NM_001164269 RAD51 0 . . . 5.52 85.36 34 5.22 No -3 0.11 No 0 0 No -27 0.68 Yes 47 79.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90991343 - NM_002485 NBN 0 . . . 3.66 69.48 16 5.04 No 48 0.24 No 0 0 No -20 0.63 No 42 60.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89698366 + NM_000314 PTEN 0 . . . 2.57 71.56 40 6.18 Yes 47 0.11 No 0 0 No -23 0.41 No 53 59.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190659890 + NM_000534 PMS1 0 . . . 4.4 89.04 27 7.21 Yes 11 0.71 No 0 0 No -26 0.9 Yes 47 79.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56798614 + NM_058216 RAD51C 0 . . . 2.95 79.62 14 4.47 No 51 -3.13 No 0 0 No -30 0.72 Yes 39 70.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215599901 - NM_000465 BARD1 0 . . . 7.4 85.46 29 5.39 No 76 1.24 Yes 0 0 No -55 0.19 No 45 87.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190743782 + NM_000534 PMS1 0 . . . 1.76 66.24 20 7.36 Yes 75 1 Yes 0 0 No -32 0.6 No 42 54.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108116735 + NM_000051 ATM 0 . . . 7.11 84.29 22 5.66 Yes 6 0.99 Yes 0 0 No -21 0.74 Yes 52 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89662255 + NM_000314 PTEN 0 . . . 5.49 78.35 19 6.63 Yes 70 0.47 No 0 0 No -23 0.29 No 45 49.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48034218 + NM_000179 MSH6 0 . . . 4.56 82.37 42 6.7 Yes 74 0.67 No 0 0 No -41 0.76 Yes 47 72.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190721579 + NM_000534 PMS1 0 . . . 7.27 73.38 20 6.08 Yes 76 2.12 Yes 0 0 No -19 0.74 Yes 45 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215597880 - NM_000465 BARD1 0 . . . 2.96 82.38 28 5.38 No 65 -3.94 No 0 0 No -27 0.82 Yes 48 51.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94193936 - NM_005591 MRE11 0 . . . 0.28 81.27 47 7.23 Yes 16 0.33 No 0 0 No -20 0.6 No 32 70.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68878156 + NM_133509 RAD51B 0 . . . 3.01 77.91 23 5.79 Yes 32 0.63 No 0 0 No -22 0.41 No 26 72.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69100178 + NM_133509 RAD51B 0 . . . 3.44 72.39 17 4.8 No 70 -1.41 No 0 0 No -19 0.57 No 41 86.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84407563 - NM_139076 FAM175A 0 . . . 9.23 91.09 22 6.78 Yes 13 0.83 Yes 0 0 No -21 0.96 Yes 48 66.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68391083 + NM_133509 RAD51B 0 . . . 1.85 0 12 5.21 No 3 -1.65 No 0 0 No -25 0.91 Yes 39 48.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59826333 - NM_032043 BRIP1 0 . . . 5.2 85.02 35 6.37 Yes 5 1.23 Yes 0 0 No -34 0.93 Yes 53 81.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23648516 - NM_024675 PALB2 0 . . . 0.73 73.91 26 5.17 No 28 1.43 Yes 0 0 No -25 0.78 Yes 54 51.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215649489 - NM_000465 BARD1 0 . . . 8.16 74.53 27 5.1 No 43 1.3 Yes 0 0 No -26 0.77 Yes 42 71.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68558712 + NM_133509 RAD51B 0 . . . 0.3 0 15 5.05 No 36 0.04 No 0 0 No -21 0.63 No 22 80.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89674096 + NM_000314 PTEN 0 . . . 3.02 62.75 78 8.2 Yes 33 0.69 No 0 0 No -29 0.56 No 30 77.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69082851 + NM_133509 RAD51B 0 . . . 3.26 77.39 24 4.8 No 66 0.71 No 0 0 No -23 0.51 No 35 68.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75509306 - NM_001040108 MLH3 0 . . . 6.88 70.78 27 5.47 No 1 1.33 Yes 0 0 No -26 0.94 Yes 42 94.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68727476 + NM_133509 RAD51B 0 . . . 1.96 0 33 6.56 Yes 11 1.03 Yes 0 0 No -32 0.43 No 46 56.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69086551 + NM_133509 RAD51B 0 . . . 2.36 80.92 24 5.89 Yes 27 0.86 Yes 0 0 No -23 0.82 Yes 49 81.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847469 + NM_133509 RAD51B 0 . . . 6.57 76.7 20 6.09 Yes 15 0.42 No 0 0 No -25 0.68 Yes 43 84.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215643820 - NM_000465 BARD1 0 . . . 8.56 73.83 23 6.83 Yes 44 0.55 No 0 0 No -22 0.74 Yes 38 52.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68875963 + NM_133509 RAD51B 0 . . . 2.78 83.24 17 4.69 No 0 0.71 No 0 0 No -29 0.3 No 51 81.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69149062 + NM_133509 RAD51B 0 . . . 4.61 75.23 15 4.15 No 57 0.87 Yes 0 0 No -26 0.59 No 50 63.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23644169 - NM_024675 PALB2 0 . . . 2.41 68.34 19 5 No 23 1.57 Yes 0 0 No -18 0.67 Yes 35 61.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59930205 - NM_032043 BRIP1 0 . . . 2.29 71.96 17 4.91 No 2 1.2 Yes 0 0 No -30 0.44 No 43 53.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37075585 + NM_000249 MLH1 0 . . . 8.19 73.12 27 5.74 Yes 43 0.68 No 0 0 No -26 0.61 No 35 71.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90961412 - NM_002485 NBN 0 . . . 2.77 71.25 35 7.13 Yes 57 0.45 No 0 0 No -34 0.62 No 49 44.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94154367 - NM_005591 MRE11 0 . . . 5.02 72.48 21 7.45 Yes -1 0.64 No 0 0 No -21 0.44 No 34 83.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75518958 - NM_001040108 MLH3 0 . . . 0.14 65.01 56 7.56 Yes 65 -4.74 No 0 0 No -28 0.66 No 36 56.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152345668 - NM_005431 XRCC2 0 . . . 3.8 76.47 21 5.04 No 2 0.27 No 0 0 No -20 0.54 No 44 83.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68786500 + NM_133509 RAD51B 0 . . . 4.59 66.5 17 5.29 No 53 0.71 No 0 0 No -25 0.32 No 45 83.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48010329 + NM_000179 MSH6 0 . . . 0.88 76.35 25 6.7 Yes NA NA NA 0 0 No -24 0.62 No 55 27.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32920045 + NM_000059 BRCA2 0 . . . 0.66 0 18 4.8 No 20 -2.48 No 0 0 No -17 0.37 No 47 85.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94177962 - NM_005591 MRE11 0 . . . 0.67 0 30 5.9 Yes 10 0.7 No 0 0 No -29 0.63 No 41 49.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1214570 + NM_000455 STK11 0 . . . 0.27 70.93 16 4.87 No 76 0.27 No 0 0 No -28 0.53 No 37 28.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152349082 - NM_005431 XRCC2 0 . . . 5.16 82.6 17 5.29 No 1 0.3 No 0 0 No -21 0.47 No 43 66.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59844289 - NM_032043 BRIP1 0 . . . 2.11 75.77 21 5.53 No 55 1.22 Yes 0 0 No -20 0.82 Yes 39 56.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68857444 + NM_133509 RAD51B 0 . . . 6.58 87.16 33 5.83 Yes 4 0.58 No 0 0 No -32 0.43 No 41 56.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105180875 + NM_021930 RINT1 0 . . . 1.88 58.94 15 4.58 No 74 2.16 Yes 0 0 No -24 0.85 Yes 50 60.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59802444 - NM_032043 BRIP1 0 . . . 1.23 63.63 10 5.92 Yes 67 -6.09 No 0 0 No -28 0.7 Yes 40 51.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68972831 + NM_133509 RAD51B 0 . . . 2.08 0 28 5.09 No 65 0.15 No 0 0 No -19 0.47 No 53 61.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56797345 + NM_058216 RAD51C 0 . . . 3.05 69.06 25 5.42 No 14 1.67 Yes 0 0 No -24 0.74 Yes 44 89.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68335603 + NM_133509 RAD51B 0 . . . 2.49 73.8 18 4.89 No 5 0.31 No 0 0 No -57 0.45 No 48 76.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37041421 + NM_000249 MLH1 0 . . . 8.66 87.44 27 4.73 No 18 0.52 No 0 0 No -26 0.94 Yes 40 92.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105177907 + NM_021930 RINT1 0 . . . 6.97 69.75 33 6.56 Yes 45 -3.78 No 0 0 No -32 0.73 Yes 46 52.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108238301 + NM_000051 ATM 0 . . . 0.1 77.41 14 5.48 No 45 0.79 Yes 0 0 No -24 0.55 No 51 60.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152364875 - NM_005431 XRCC2 0 . . . 1.08 80.24 19 5.66 Yes 13 1.49 Yes 0 0 No -25 0.78 Yes 45 71.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59872172 - NM_032043 BRIP1 0 . . . 2.3 76.74 24 5 No 45 1.3 Yes 0 0 No -23 0.95 Yes 48 66.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89696063 + NM_000314 PTEN 0 . . . 0.7 60.63 33 5.63 Yes 75 1.17 Yes 0 0 No -23 0.31 No 40 69.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108197480 + NM_000051 ATM 0 . . . 2.32 76.77 26 5.2 No 55 0.2 No 0 0 No -25 0.87 Yes 45 40.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68509062 + NM_133509 RAD51B 0 . . . 5.63 68.76 17 7.54 Yes 18 0.47 No 0 0 No -36 0.39 No 40 75.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90950866 - NM_002485 NBN 0 . . . 2.57 70.57 24 5.41 No 60 -4.31 No 0 0 No -26 0.77 Yes 48 54.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37037549 + NM_000249 MLH1 0 . . . 6.21 82.31 45 6.93 Yes 57 1.14 Yes 0 0 No -32 0.68 Yes 54 55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59764198 - NM_032043 BRIP1 0 . . . 2.69 73.22 21 4.69 No 9 0.89 Yes 0 0 No -24 0.29 No 49 81.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68877940 + NM_133509 RAD51B 0 . . . 1.09 78.15 26 5.57 Yes 65 1.17 Yes 0 0 No -24 0.8 Yes 21 55.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90987472 - NM_002485 NBN 0 . . . 1.92 62.6 28 5.26 No 13 0.5 No 0 0 No -31 0.86 Yes 44 80.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89694261 + NM_000314 PTEN 0 . . . 0.94 61.43 28 7.14 Yes 49 -4.56 No 0 0 No -27 0.84 Yes 38 90.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68528291 + NM_133509 RAD51B 0 . . . 8.02 87.79 26 5.55 No 64 0.56 No 0 0 No -24 0.53 No 36 94.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68914239 + NM_133509 RAD51B 0 . . . 1.28 69.43 26 5.66 Yes 41 -2.48 No 0 0 No -25 0.83 Yes 59 44.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69131713 + NM_133509 RAD51B 0 . . . 11.11 89.93 17 5.29 No 18 1.11 Yes 0 0 No -21 0.46 No 40 77.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47688942 + NM_000251 MSH2 0 . . . 1.83 75.41 21 6.78 Yes 55 1.94 Yes 0 0 No -20 0.78 Yes 3 9.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59816999 - NM_032043 BRIP1 0 . . . 4.85 76.02 30 7.52 Yes 0 0.98 Yes 0 0 No -29 0.69 Yes 42 77.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68558301 + NM_133509 RAD51B 0 . . . 3.05 0 23 5.74 Yes 44 1.26 Yes 0 0 No -26 0.45 No 26 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105187072 + NM_021930 RINT1 0 . . . 3.07 77.96 29 6.01 Yes 8 1.83 Yes 0 0 No -28 0.5 No 54 84.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215651561 - NM_000465 BARD1 0 . . . 5.02 72.85 23 4.67 No 0 0.47 No 0 0 No -22 0.53 No 52 63.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41219900 - NM_007294 BRCA1 0 . . . 9.4 92.67 31 5.74 Yes 30 1.49 Yes 0 0 No -26 0.74 Yes 39 80.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32971830 + NM_000059 BRCA2 0 . . . 0.07 66.58 13 4.36 No 25 -2.7 No 0 0 No -25 0.49 No 48 39.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68915156 + NM_133509 RAD51B 0 . . . 2.48 69.61 34 6.29 Yes 27 0.63 No 0 0 No -33 0.84 Yes 31 89.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89678094 + NM_000314 PTEN 0 . . . 5.1 71.1 17 4.85 No 35 1.42 Yes 0 0 No -22 0.24 No 23 90.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69030714 + NM_133509 RAD51B 0 . . . 3.21 68.72 18 5.76 Yes 46 0.47 No 0 0 No -24 0.32 No 45 47.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59762510 - NM_032043 BRIP1 0 . . . 5.82 68.39 22 5.15 No 51 0.65 No 0 0 No -26 0.72 Yes 47 77.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59896193 - NM_032043 BRIP1 0 . . . 3.18 74.81 33 7.59 Yes -4 0.65 No 0 0 No -32 0.56 No 35 95.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90946695 - NM_002485 NBN 0 . . . 2.21 69 28 6.94 Yes 1 1.05 Yes 0 0 No -27 0.58 No 61 41.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48030586 + NM_000179 MSH6 0 . . . 3.42 67.47 36 7.43 Yes 39 1.49 Yes 0 0 No -35 0.4 No 38 82.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68567564 + NM_133509 RAD51B 0 . . . 3.19 75.92 25 5 No 59 -4.46 No 0 0 No -25 0.5 No 49 67.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646918 + NM_133509 RAD51B 0 . . . 1.54 68.01 26 5.47 No 53 1.32 Yes 0 0 No -25 0.82 Yes 29 52.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59885804 - NM_032043 BRIP1 0 . . . 0.83 80.55 35 6.4 Yes 5 0.33 No 0 0 No -34 0.8 Yes 49 74.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68842988 + NM_004360 CDH1 0 . . . 5.26 77.68 20 7.14 Yes 47 0.76 No 0 0 No -19 0.68 Yes 60 30.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68734136 + NM_133509 RAD51B 0 . . . 1.14 69.07 27 5.51 No 12 0.78 Yes 0 0 No -26 0.94 Yes 40 93.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108150539 + NM_000051 ATM 0 . . . 5.07 82.84 25 4.9 No 46 0.35 No 0 0 No -24 0.85 Yes 48 66.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90994452 - NM_002485 NBN 0 . . . 6.17 85.04 23 5.38 No 2 0.43 No 0 0 No -22 0.44 No 45 78.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68492267 + NM_133509 RAD51B 0 . . . 7.23 83.98 36 6.08 Yes 0 0.09 No 0 0 No -25 0.74 Yes 40 47.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21990346 - NM_000077 CDKN2A 0 . . . 1.59 67.9 19 5.37 No 26 0.59 No 0 0 No -24 0.58 No 51 23.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69026971 + NM_133509 RAD51B 0 . . . 1.88 78.56 36 9.87 Yes 16 0.35 No 0 0 No -35 0.62 No 42 75.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59908816 - NM_032043 BRIP1 0 . . . 7.18 89.55 26 4.21 No 12 0.43 No 0 0 No -22 0.53 No 43 93.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105204719 + NM_021930 RINT1 0 . . . 2.24 80.12 20 4.82 No 69 1.49 Yes 0 0 No -19 0.56 No 51 76.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68293501 + NM_133509 RAD51B 0 . . . 0.09 67.8 21 5.2 No 16 0.56 No 0 0 No -20 0.68 Yes 47 67.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6035940 - NM_000535 PMS2 0 . . . 4.35 80.53 43 5.42 No 22 1.58 Yes 0 0 No -31 0.39 No 41 68.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21980676 - NM_000077 CDKN2A 0 . . . 2.91 72.2 11 5.1 No 58 1.65 Yes 0 0 No -28 0.71 Yes 52 41.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59830905 - NM_032043 BRIP1 0 . . . 8.71 82.13 18 4.22 No 8 0.37 No 0 0 No -18 0.65 No 49 50.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68683755 + NM_133509 RAD51B 0 . . . 5.33 76.55 12 4.75 No 36 1.71 Yes 0 0 No -56 0.51 No 22 90.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41019835 + NM_001164269 RAD51 0 . . . 0.03 0 13 4.95 No 71 0.58 No 0 0 No -30 0.57 No 50 65.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47653848 + NM_000251 MSH2 0 . . . 3.99 80.34 16 4.64 No 47 -3.2 No 0 0 No -19 0.36 No 49 81.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69002217 + NM_133509 RAD51B 0 . . . 1.44 0 33 4.87 No 5 1.9 Yes 0 0 No -23 0.47 No 39 48.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131925564 + NM_005732 RAD50 0 . . . 4.33 69.22 22 5.82 Yes 63 -3 No 0 0 No -21 0.31 No 42 34.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68778593 + NM_133509 RAD51B 0 . . . 0.02 0 49 7.87 Yes 76 -5.02 No 0 0 No -48 0.61 No 51 41.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89644707 + NM_000314 PTEN 0 . . . 3.57 79.6 42 7.53 Yes 3 0.53 No 0 0 No -22 0.68 Yes 43 63.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32888618 + NM_000059 BRCA2 0 . . . 0.28 0 41 5.18 No 55 0.43 No 0 0 No -28 0.77 Yes 46 63.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190658250 + NM_000534 PMS1 0 . . . 5.52 89.87 19 4.68 No 65 -3.83 No 0 0 No -18 0.82 Yes 44 60.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68913998 + NM_133509 RAD51B 0 . . . 0.63 61.68 10 4 No 63 0.38 No 0 0 No -46 0.52 No 45 89.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69069365 + NM_133509 RAD51B 0 . . . 2.28 69.57 26 5.1 No 68 -6.26 No 0 0 No -58 0.52 No 49 59.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104178055 - NM_001100119 XRCC3 0 . . . 1.55 63.04 27 5.57 Yes 35 1.03 Yes 0 0 No -28 0.74 Yes 23 48.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68434766 + NM_133509 RAD51B 0 . . . 9.54 86.84 16 4.69 No 14 0.34 No 0 0 No -52 0.71 Yes 44 88.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68862693 + NM_133509 RAD51B 0 . . . 0.1 70.41 23 5.39 No 76 0.42 No 0 0 No -22 0.9 Yes 50 75.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47666993 + NM_000251 MSH2 0 . . . 1.35 0 26 5.24 No 20 0.54 No 0 0 No -26 0.54 No 38 32.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32944150 + NM_000059 BRCA2 0 . . . 3.77 62.41 42 6.93 Yes 26 0.78 Yes 0 0 No -33 0.68 Yes 32 64.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68601794 + NM_133509 RAD51B 0 . . . 5.66 80.53 19 5.65 Yes 33 0.94 Yes 0 0 No -18 0.65 No 46 42.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69084346 + NM_133509 RAD51B 0 . . . 0.26 68 27 3.75 No 18 1.77 Yes 0 0 No -21 0.46 No 40 83.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68821220 + NM_004360 CDH1 0 . . . 2.71 64.84 18 4.33 No 11 2.07 Yes 0 0 No -18 0.68 Yes 47 85.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68350905 + NM_133509 RAD51B 0 . . . 1.75 80.55 31 4.81 No 60 -5.62 No 0 0 No -30 0.61 No 35 76.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68834811 + NM_133509 RAD51B 0 . . . 5.39 85.95 30 5.86 Yes 3 0.88 Yes 0 0 No -26 0.51 No 48 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68842414 + NM_133509 RAD51B 0 . . . 1.06 68.85 49 6.47 Yes 30 1.24 Yes 0 0 No -30 0.93 Yes 50 52.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59790101 - NM_032043 BRIP1 0 . . . 2.01 82.35 24 4.8 No 4 1.19 Yes 0 0 No -8 0.36 No 54 52.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29113766 - NM_001005735 CHEK2 0 . . . 1.41 84.22 29 4.85 No 3 0.7 No 0 0 No -28 0.92 Yes 50 76.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215645029 - NM_000465 BARD1 0 . . . 1.45 77.99 18 7 Yes 74 -4 No 0 0 No -28 0.56 No 37 47.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69009293 + NM_133509 RAD51B 0 . . . 6.57 82.48 20 3.76 No 20 0.23 No 0 0 No -23 0.96 Yes 46 47.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89702541 + NM_000314 PTEN 0 . . . 0.62 71.77 30 5.39 No 32 0.65 No 0 0 No -29 0.69 Yes 53 75.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37054519 + NM_000249 MLH1 0 . . . 4.42 84.22 18 5.45 No 76 1.49 Yes 0 0 No -25 0.68 Yes 50 89.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7572082 - NM_000546 TP53 0 . . . 5.39 82.63 16 4.69 No 5 -0.47 No 0 0 No -19 0.71 Yes 44 63.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69055195 + NM_133509 RAD51B 0 . . . 3.97 82.34 26 3.81 No 3 0.94 Yes 0 0 No -25 0.8 Yes 46 77.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190732769 + NM_000534 PMS1 0 . . . 2.61 69.49 25 4.7 No 74 0.71 No 0 0 No -24 0.41 No 35 88.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32970374 + NM_000059 BRCA2 0 . . . 1.31 70.85 25 4.11 No 13 0.81 Yes 0 0 No -30 0.37 No 45 78.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69127238 + NM_133509 RAD51B 0 . . . 2.54 81.65 10 4.69 No 37 -1.29 No 0 0 No -37 0.29 No 46 67.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190709608 + NM_000534 PMS1 0 . . . 2.84 0 23 5.19 No 20 0.6 No 0 0 No -20 0.65 No 31 58.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68411748 + NM_133509 RAD51B 0 . . . 5.87 72.95 29 5.54 No 3 0.26 No 0 0 No -24 0.64 No 51 57.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47745707 + NM_000251 MSH2 0 . . . 0.44 86.21 20 4.64 No 6 0.22 No 0 0 No -19 0.91 Yes 46 89.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48035790 + NM_000179 MSH6 0 . . . 0.6 70.35 23 4.99 No 50 0.53 No 0 0 No -22 0.57 No 51 74.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84404896 - NM_139076 FAM175A 0 . . . 4.95 77.8 10 4.96 No 32 0.53 No 0 0 No -26 0.57 No 48 72.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32948838 + NM_000059 BRCA2 0 . . . 3.67 73.85 28 5.48 No 71 1.64 Yes 0 0 No -27 0.61 No 50 85.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56806494 + NM_058216 RAD51C 0 . . . 5.25 76.09 28 5.57 Yes 2 0.65 No 0 0 No -27 0.89 Yes 52 49.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33447281 - NM_002878 RAD51D 0 . . . 1.14 68.52 12 3.65 No 69 -2.01 No 0 0 No -19 0.71 Yes 39 78.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68750951 + NM_133509 RAD51B 0 . . . 1.16 66.88 25 5.57 Yes 12 0.65 No 0 0 No -24 0.7 Yes 46 96.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47733200 + NM_000251 MSH2 0 . . . 5.05 76.43 17 4.55 No 11 1.26 Yes 0 0 No -24 0.54 No 47 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215651722 - NM_000465 BARD1 0 . . . 1.26 76.2 31 6.62 Yes 4 1.05 Yes 0 0 No -30 0.96 Yes 31 58.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68395413 + NM_133509 RAD51B 0 . . . 2.35 83.94 22 4 No -4 0.8 Yes 0 0 No -20 0.31 No 50 46.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68835012 + NM_133509 RAD51B 0 . . . 1.97 0 29 4.43 No 39 0.12 No 0 0 No -28 0.75 Yes 52 48.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190724972 + NM_000534 PMS1 0 . . . 1.92 0 23 5.81 Yes 15 1.22 Yes 0 0 No -22 0.76 Yes 43 61.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68945137 + NM_133509 RAD51B 0 . . . 3.25 73.63 56 8.54 Yes -2 0.35 No 0 0 No -27 0.39 No 45 62.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89661592 + NM_000314 PTEN 0 . . . 8.51 79.64 25 5.2 No 62 1.58 Yes 0 0 No -27 0.42 No 40 80.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104171708 - NM_001100119 XRCC3 0 . . . 6.25 74.63 30 6.71 Yes -3 0.5 No 0 0 No -29 0.73 Yes 47 89.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69129170 + NM_133509 RAD51B 0 . . . 2.88 0 15 4.58 No 43 1.36 Yes 0 0 No -25 0.46 No 46 70.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68781711 + NM_004360 CDH1 0 . . . 5.42 87.63 29 5.37 No 14 -0.3 No 0 0 No -22 0.86 Yes 44 86.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21972497 - NM_000077 CDKN2A 0 . . . 10.7 89.79 17 4.58 No 18 0.63 No 0 0 No -22 0.51 No 40 86.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59789663 - NM_032043 BRIP1 0 . . . 1.37 74.08 21 5.1 No 16 -1.24 No 0 0 No -20 0.42 No 42 31.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68593356 + NM_133509 RAD51B 0 . . . 2.13 75.65 25 3.75 No 39 0.29 No 0 0 No -24 0.5 No 33 57.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68666773 + NM_133509 RAD51B 0 . . . 6.73 79.12 13 4.36 No 49 0.89 Yes 0 0 No -25 0.64 No 15 52.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29094811 - NM_001005735 CHEK2 0 . . . 3.02 72.74 25 5.39 No 16 0.56 No 0 0 No -24 0.83 Yes 42 91.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94181550 - NM_005591 MRE11 0 . . . 1.52 79.24 34 7.34 Yes 53 1.6 Yes 0 0 No -36 0.36 No 59 10.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37037334 + NM_000249 MLH1 0 . . . 0.18 84.41 21 5.8 Yes 22 1.41 Yes 0 0 No -20 0.95 Yes 32 81.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47723514 + NM_000251 MSH2 0 . . . 1.21 74.55 46 6.57 Yes 41 -2.92 No 0 0 No -31 0.84 Yes 50 55.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68551174 + NM_133509 RAD51B 0 . . . 5.54 77.53 17 5.35 No 3 1.82 Yes 0 0 No -28 0.85 Yes 42 74.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131900206 + NM_005732 RAD50 0 . . . 5.8 73.56 21 5.16 No 66 -5.26 No 0 0 No -20 0.41 No 46 86.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68427664 + NM_133509 RAD51B 0 . . . 1.28 83.52 36 7.06 Yes 33 0.68 No 0 0 No -27 0.39 No 25 83.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41014903 + NM_001164269 RAD51 0 . . . 6.03 78.92 36 7.11 Yes 48 -3.84 No 0 0 No -35 0.51 No 34 49.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47743500 + NM_000251 MSH2 0 . . . 3.29 77.27 20 5.57 Yes 40 -3.19 No 0 0 No -19 0.67 Yes 46 59.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94163412 - NM_005591 MRE11 0 . . . 9.47 85.59 24 5.1 No 29 1.23 Yes 0 0 No -23 0.97 Yes 44 69.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68457975 + NM_133509 RAD51B 0 . . . 11.53 88.89 18 5.84 Yes 26 0.98 Yes 0 0 No -17 0.28 No 41 61.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68773405 + NM_004360 CDH1 0 . . . 4.31 77.22 16 5.37 No 55 0.16 No 0 0 No -28 0.43 No 41 48.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152349986 - NM_005431 XRCC2 0 . . . 8.18 69.45 14 4.47 No 1 -0.9 No 0 0 No -41 0.4 No 40 71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68811995 + NM_004360 CDH1 0 . . . 4.05 84.95 31 4.78 No 75 -1.88 No 0 0 No -29 0.61 No 18 80.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68837319 + NM_004360 CDH1 0 . . . 4.01 87.44 27 6.08 Yes 71 -4.25 No 0 0 No -26 0.77 Yes 44 62.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32917844 + NM_000059 BRCA2 0 . . . 7.15 78.72 50 7.71 Yes 1 1.22 Yes 0 0 No -26 0.6 No 47 66.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84380361 - NM_139076 FAM175A 0 . . . 6.9 82.94 21 5.74 Yes 9 1.03 Yes 0 0 No -20 0.38 No 49 66.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68640737 + NM_133509 RAD51B 0 . . . 6.98 80.77 14 3.46 No 76 0.54 No 0 0 No -21 0.46 No 44 95.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105191556 + NM_021930 RINT1 0 . . . 2.92 77.15 62 8.56 Yes 38 1.2 Yes 0 0 No -30 0.8 Yes 44 49.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152373890 - NM_005431 XRCC2 0 . . . 4.58 83.11 21 4.53 No 72 -1.62 No 0 0 No -20 0.88 Yes 15 77.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68623149 + NM_133509 RAD51B 0 . . . 0.83 73.3 15 5.52 No 17 0.05 No 0 0 No -26 0.49 No 41 67.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37086059 + NM_000249 MLH1 0 . . . 0.21 69.17 34 6.53 Yes 34 0.66 No 0 0 No -33 0.89 Yes 53 15.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108135432 + NM_000051 ATM 0 . . . 8.28 86.08 30 5.66 Yes 55 -3.25 No 0 0 No -29 0.91 Yes 51 55.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47676983 + NM_000251 MSH2 0 . . . 3.21 80.28 20 5.73 Yes 2 0.32 No 0 0 No -33 0.2 No 34 74.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1221416 + NM_000455 STK11 0 . . . 0.12 71.19 24 5.1 No 54 1.06 Yes 0 0 No -23 0.91 Yes 53 40.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215627046 - NM_000465 BARD1 0 . . . 8.49 81.7 16 4.94 No 41 0.73 No 0 0 No -27 0.56 No 46 68.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68928878 + NM_133509 RAD51B 0 . . . 1.42 77.83 17 4.81 No 65 0.2 No 0 0 No -22 0.31 No 52 80.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190701176 + NM_000534 PMS1 0 . . . 2.83 75.83 20 5.57 Yes 3 0.63 No 0 0 No -28 0.58 No 22 52.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68865100 + NM_004360 CDH1 0 . . . 4.18 82.97 31 5.66 Yes 33 0.9 Yes 0 0 No -30 0.76 Yes 50 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68317184 + NM_133509 RAD51B 0 . . . 5.95 87.81 15 5.27 No 45 -1.15 No 0 0 No -24 0.76 Yes 50 71.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47648252 + NM_000251 MSH2 0 . . . 0.84 74.68 27 5.57 Yes 64 1.11 Yes 0 0 No -21 0.78 Yes 52 50.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68295490 + NM_133509 RAD51B 0 . . . 8.28 94.98 50 5.97 Yes 60 0.27 No 0 0 No -23 0.65 No 33 69.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59876924 - NM_032043 BRIP1 0 . . . 4.47 77.48 17 4.48 No 73 -1.89 No 0 0 No -43 0.61 No 21 67.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29093211 - NM_001005735 CHEK2 0 . . . 3.58 80.09 34 3.76 No 34 1.28 Yes 0 0 No -26 0.84 Yes 47 49.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104175592 - NM_001100119 XRCC3 0 . . . 0.24 0 19 6.42 Yes 17 1.24 Yes 0 0 No -29 0.44 No 41 85.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29086589 - NM_001005735 CHEK2 0 . . . 5.94 90.21 68 4.9 No 42 1.09 Yes 0 0 No -22 0.55 No 16 93.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90962107 - NM_002485 NBN 0 . . . 1.21 72.46 33 6 Yes 70 0.29 No 0 0 No -32 0.84 Yes 41 76.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59914153 - NM_032043 BRIP1 0 . . . 0.05 78.4 19 5 No 53 0.78 Yes 0 0 No -41 0.58 No 50 71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59857216 - NM_032043 BRIP1 0 . . . 1.69 86.9 14 5.48 No 18 1.45 Yes 0 0 No -23 0.4 No 51 50.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41005315 + NM_001164269 RAD51 0 . . . 0.07 71.27 20 5.64 Yes -4 1.36 Yes 0 0 No -19 0.45 No 53 50.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59900732 - NM_032043 BRIP1 0 . . . 0.15 0 24 4.51 No 36 1.08 Yes 0 0 No -27 0.5 No 30 67.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41233500 - NM_007294 BRCA1 0 . . . 4.61 76.71 10 4 No 36 0.93 Yes 0 0 No -25 0.56 No 53 56.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68520127 + NM_133509 RAD51B 0 . . . 1.82 69.66 22 4.12 No 51 0.18 No 0 0 No -21 0.37 No 35 35.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108213439 + NM_000051 ATM 0 . . . 2.22 60.84 16 5.04 No 45 0.8 Yes 0 0 No -45 0.53 No 42 78.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68758331 + NM_133509 RAD51B 0 . . . 1.08 73.01 31 5.74 Yes 14 1.18 Yes 0 0 No -30 0.62 No 44 58.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105209485 + NM_021930 RINT1 0 . . . 4.49 0 25 3.84 No 23 2.09 Yes 0 0 No -27 0.38 No 35 95.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69032137 + NM_133509 RAD51B 0 . . . 4.83 85.28 21 6 Yes 62 0.43 No 0 0 No -20 0.64 No 32 89.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68753390 + NM_133509 RAD51B 0 . . . 4.75 66.03 33 6.07 Yes 20 1.1 Yes 0 0 No -40 0.52 No 38 94.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89630592 + NM_000314 PTEN 0 . . . 5.15 70.5 20 5 No 31 0.64 No 0 0 No -47 0.7 Yes 58 36.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68665731 + NM_133509 RAD51B 0 . . . 11.14 87.26 19 4.89 No 54 0.88 Yes 0 0 No -24 0.39 No 49 73.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68390694 + NM_133509 RAD51B 0 . . . 3.6 70.03 31 6.85 Yes -4 0.38 No 0 0 No -26 0.79 Yes 33 88.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68838293 + NM_004360 CDH1 0 . . . 0.11 80.49 30 4.56 No 35 1.69 Yes 0 0 No -30 0.77 Yes 23 40.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215598437 - NM_000465 BARD1 0 . . . 1.68 84.82 26 5.39 No 62 0.62 No 0 0 No -25 0.89 Yes 48 73.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33438885 - NM_002878 RAD51D 0 . . . 1.82 68.52 32 6.51 Yes 49 0.44 No 0 0 No -31 0.92 Yes 46 75.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56808715 + NM_058216 RAD51C 0 . . . 6.61 88.68 18 4.69 No 9 1.26 Yes 0 0 No -24 0.47 No 49 85.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68628318 + NM_133509 RAD51B 0 . . . 4.33 79.08 28 5.74 Yes 7 0.35 No 0 0 No -27 0.77 Yes 43 75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45800570 - NM_001048171 MUTYH 0 . . . 0.42 69.41 22 4.73 No 76 1.62 Yes 0 0 No -21 0.91 Yes 45 70.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190700944 + NM_000534 PMS1 0 . . . 2.77 80.01 11 3.7 No 5 1.68 Yes 0 0 No -41 0.45 No 48 93.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105173386 + NM_021930 RINT1 0 . . . 1.31 67.07 25 5.57 Yes 36 0.11 No 0 0 No -24 0.81 Yes 22 34.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131911946 + NM_005732 RAD50 0 . . . 2.57 78 13 5.78 Yes 20 0 No 0 0 No -24 0.8 Yes 32 84.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7576140 - NM_000546 TP53 0 . . . 2.54 65.08 25 7.13 Yes 64 1.7 Yes 0 0 No -29 0.37 No 46 70.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56812960 + NM_058216 RAD51C 0 . . . 2.62 60.48 31 6.8 Yes 33 1.32 Yes 0 0 No -30 0.66 Yes 42 40.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90976638 - NM_002485 NBN 0 . . . 0.97 0 30 5.18 No 40 0.85 Yes 0 0 No -29 0.92 Yes 32 55.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68592266 + NM_133509 RAD51B 0 . . . 1.13 66.06 25 5.78 Yes 74 0.89 Yes 0 0 No -24 0.74 Yes 43 90.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68967041 + NM_133509 RAD51B 0 . . . 10.54 84.81 26 5.66 Yes 3 1.12 Yes 0 0 No -22 0.51 No 40 94.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41254225 - NM_007294 BRCA1 0 . . . 0.18 65.79 22 6.83 Yes 57 0.45 No 0 0 No -21 0.76 Yes 47 49.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6011744 - NM_000535 PMS2 0 . . . 7.73 79.5 29 5.09 No -4 0.72 No 0 0 No -28 0.87 Yes 48 63.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89678256 + NM_000314 PTEN 0 . . . 7.28 75.97 16 5.39 No 61 -5.45 No 0 0 No -22 0.5 No 44 91.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37085354 + NM_000249 MLH1 0 . . . 4.52 78.55 11 5.1 No 30 0.15 No 0 0 No -19 0.24 No 46 82.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131952212 + NM_005732 RAD50 0 . . . 3.17 85.31 23 4.69 No 0 0.43 No 0 0 No -22 0.89 Yes 52 48.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108166078 + NM_000051 ATM 0 . . . 7.18 85.05 19 5 No 29 0.97 Yes 0 0 No -56 0.26 No 42 36.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89719782 + NM_000314 PTEN 0 . . . 1.72 71.33 27 5.61 Yes 44 -3.86 No 0 0 No -34 0.57 No 52 24.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68555110 + NM_133509 RAD51B 0 . . . 7.52 78.65 25 4.9 No 29 1.02 Yes 0 0 No -24 0.63 No 39 58.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7590935 - NM_000546 TP53 0 . . . 10.09 89.19 26 3.92 No 36 2.5 Yes 0 0 No -26 0.42 No 42 57.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48021800 + NM_000179 MSH6 0 . . . 4.25 67.16 21 5.65 Yes 16 0.87 Yes 0 0 No -21 0.41 No 42 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131965400 + NM_005732 RAD50 0 . . . 7.18 79.16 18 5.74 Yes 5 1.26 Yes 0 0 No -29 0.4 No 41 64.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68362917 + NM_133509 RAD51B 0 . . . 1.92 0 25 5.92 Yes 12 0.6 No 0 0 No -25 0.71 Yes 46 47.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47680825 + NM_000251 MSH2 0 . . . 2.09 74.45 25 5.92 Yes 50 0.2 No 0 0 No -28 0.54 No 46 58.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84400715 - NM_139076 FAM175A 0 . . . 2.77 61.89 26 5.2 No 61 0.58 No 0 0 No -25 0.85 Yes 41 50.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215656648 - NM_000465 BARD1 0 . . . 5.18 79.35 41 6.56 Yes 49 2.2 Yes 0 0 No -40 0.73 Yes 52 30.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33445234 - NM_002878 RAD51D 0 . . . 6.59 75.02 40 6.47 Yes 63 0.34 No 0 0 No -47 0.68 Yes 45 72.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68520837 + NM_133509 RAD51B 0 . . . 3.71 73.39 23 4.77 No 60 0.43 No 0 0 No -22 0.85 Yes 40 89.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47686425 + NM_000251 MSH2 0 . . . 3.37 0 14 5.18 No 30 0.11 No 0 0 No -20 0.33 No 54 55.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90992292 - NM_002485 NBN 0 . . . 2.12 82.18 20 4.66 No 69 0.73 No 0 0 No -24 0.75 Yes 46 63.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47802625 + NM_000251 MSH2 0 . . . 8.59 89.31 58 8.31 Yes 4 0.86 Yes 0 0 No -24 0.74 Yes 43 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215599849 - NM_000465 BARD1 0 . . . 1.17 68.67 26 5.34 No 13 0.16 No 0 0 No -25 0.92 Yes 55 41.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68654650 + NM_133509 RAD51B 0 . . . 2.1 84.22 16 6.1 Yes 33 1.13 Yes 0 0 No -58 0.53 No 49 59.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68786065 + NM_004360 CDH1 0 . . . 2.1 74.73 37 7 Yes 33 1.16 Yes 0 0 No -36 0.39 No 39 42.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68794807 + NM_133509 RAD51B 0 . . . 2.11 80.89 18 5.2 No 51 1.47 Yes 0 0 No -25 0.51 No 15 30.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190736230 + NM_000534 PMS1 0 . . . 2.23 79.59 39 5.35 No 1 1.25 Yes 0 0 No -31 0.47 No 43 27.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32909687 + NM_000059 BRCA2 0 . . . 1.41 68.12 22 4.75 No 67 0.1 No 0 0 No -22 0.62 No 37 62.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69030055 + NM_133509 RAD51B 0 . . . 10.89 89.07 23 6.84 Yes 74 -2.62 No 0 0 No -22 0.63 No 24 72.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59883420 - NM_032043 BRIP1 0 . . . 2.41 71.78 31 5.48 No 8 1.12 Yes 0 0 No -31 0.35 No 41 58.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21976063 - NM_000077 CDKN2A 0 . . . 0.72 58.86 25 5.39 No 38 0.19 No 0 0 No -22 0.8 Yes 39 81.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190669025 + NM_000534 PMS1 0 . . . 3.37 78.73 18 4.87 No 44 -2.71 No 0 0 No -24 0.31 No 49 76.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68741486 + NM_133509 RAD51B 0 . . . 7.45 73.35 17 4.73 No 53 1.1 Yes 0 0 No -25 0.69 Yes 47 51.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32922517 + NM_000059 BRCA2 0 . . . 0.34 64.12 12 4.24 No -4 0.6 No 0 0 No -36 0.87 Yes 44 36.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215660027 - NM_000465 BARD1 0 . . . 6 84.55 31 6.33 Yes 49 0.9 Yes 0 0 No -30 0.37 No 39 79.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152366446 - NM_005431 XRCC2 0 . . . 1.2 77.52 27 5.2 No 2 1.04 Yes 0 0 No -26 0.76 Yes 29 70.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59764708 - NM_032043 BRIP1 0 . . . 1.79 76.33 17 5.29 No 14 0.24 No 0 0 No -21 0.74 Yes 44 46.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1216998 + NM_000455 STK11 0 . . . 3.47 74.31 39 6.94 Yes 5 1.59 Yes 0 0 No -25 0.67 Yes 53 67.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68657025 + NM_133509 RAD51B 0 . . . 4.9 86.92 19 4.88 No 38 0.21 No 0 0 No -18 0.47 No 50 55.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32946254 + NM_000059 BRCA2 0 . . . 2.67 0 12 4.24 No 23 1.08 Yes 0 0 No -38 0.72 Yes 51 65.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68841436 + NM_004360 CDH1 0 . . . 3.28 62.77 22 4.8 No 7 -2.66 No 0 0 No -21 0.71 Yes 42 67.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59755735 - NM_032043 BRIP1 0 . . . 1.16 67.24 23 6.21 Yes -4 0.1 No 0 0 No -22 0.89 Yes 34 25.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108201196 + NM_000051 ATM 0 . . . 1.7 59.46 38 4.82 No 23 0.74 No 0 0 No -31 0.57 No 35 94.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21991253 - NM_000077 CDKN2A 0 . . . 3.85 80.2 16 6.86 Yes 45 -3.17 No 0 0 No -24 0.36 No 41 91.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190743964 + NM_000534 PMS1 0 . . . 2.52 84.22 25 3.61 No 8 0.04 No 0 0 No -40 0.46 No 50 53.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68484289 + NM_133509 RAD51B 0 . . . 6.51 81.69 21 5.2 No 41 0.32 No 0 0 No -51 0.24 No 52 63.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40994817 + NM_001164269 RAD51 0 . . . 3.02 68.91 41 5.77 Yes 16 1.3 Yes 0 0 No -20 0.52 No 42 94.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75501889 - NM_001040108 MLH3 0 . . . 0.86 0 9 5.7 Yes 29 0.08 No 0 0 No -27 0.65 No 36 64.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105187760 + NM_021930 RINT1 0 . . . 0.48 80.77 15 5.38 No 11 0.04 No 0 0 No -45 0.54 No 47 68.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68591123 + NM_133509 RAD51B 0 . . . 4.23 79.02 46 6.96 Yes -1 0.8 Yes 0 0 No -33 0.44 No 37 62.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48029944 + NM_000179 MSH6 0 . . . 1.9 0 43 5.29 No 52 0.6 No 0 0 No -42 0.62 No 38 61.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89673648 + NM_000314 PTEN 0 . . . 5.51 86.92 24 4.82 No 44 1.44 Yes 0 0 No -29 0.48 No 52 62.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89637374 + NM_000314 PTEN 0 . . . 2.23 65.42 40 5.15 No 48 0.77 No 0 0 No -26 0.46 No 45 63.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68739866 + NM_133509 RAD51B 0 . . . 7.48 76.46 26 5.61 Yes 41 1.46 Yes 0 0 No -25 0.69 Yes 45 73.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68434922 + NM_133509 RAD51B 0 . . . 0.57 66.16 10 4 No 62 -5.73 No 0 0 No -29 0.94 Yes 49 63.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6012408 - NM_000535 PMS2 0 . . . 4.27 60.62 21 5.23 No 13 0.59 No 0 0 No -20 0.82 Yes 45 84.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69006013 + NM_133509 RAD51B 0 . . . 3.61 0 23 6.06 Yes 57 1.19 Yes 0 0 No -22 0.73 Yes 40 93.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131957148 + NM_005732 RAD50 0 . . . 0.36 62.98 23 4.95 No 56 1.45 Yes 0 0 No -22 0.61 No 45 62.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68705833 + NM_133509 RAD51B 0 . . . 11.09 82.63 29 6.32 Yes 11 0.62 No 0 0 No -28 0.79 Yes 47 75.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68836799 + NM_133509 RAD51B 0 . . . 0.56 0 44 7.24 Yes 15 1.63 Yes 0 0 No -44 0.64 No 43 50.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68769887 + NM_004360 CDH1 0 . . . 5.32 86.8 32 7.03 Yes 0 0.45 No 0 0 No -31 0.67 Yes 45 86.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68521052 + NM_133509 RAD51B 0 . . . 4.12 70.49 44 4.89 No 70 0.67 No 0 0 No -37 0.6 No 43 67.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68347013 + NM_133509 RAD51B 0 . . . 0.79 77.6 29 6.78 Yes 5 0.77 Yes 0 0 No -28 0.4 No 53 47.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190722947 + NM_000534 PMS1 0 . . . 8.96 77.67 19 4.8 No 62 1.85 Yes 0 0 No -18 0.93 Yes 22 78.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68808062 + NM_133509 RAD51B 0 . . . 1.67 70.06 20 4.8 No 25 0.94 Yes 0 0 No -23 0.87 Yes 33 60.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37093707 + NM_000249 MLH1 0 . . . 1.31 73.95 32 6 Yes 47 -4.12 No 0 0 No -31 0.94 Yes 47 42.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131925060 + NM_005732 RAD50 0 . . . 1.84 72.75 18 4.9 No 36 -3.56 No 0 0 No -56 0.82 Yes 48 77.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68516561 + NM_133509 RAD51B 0 . . . 1.46 74.37 32 5.28 No 25 1.31 Yes 0 0 No -31 0.55 No 33 80.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56787007 + NM_058216 RAD51C 0 . . . 2.2 81.15 43 5.91 Yes 7 0.46 No 0 0 No -33 0.52 No 51 91.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68658536 + NM_133509 RAD51B 0 . . . 2.74 63.84 22 5.29 No 21 0.12 No 0 0 No -28 0.54 No 40 66.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152363472 - NM_005431 XRCC2 0 . . . 2.6 64.59 34 5.32 No 64 -2.96 No 0 0 No -29 0.63 No 43 38.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68563809 + NM_133509 RAD51B 0 . . . 5.56 78.19 15 4.58 No 29 1.17 Yes 0 0 No -21 0.49 No 29 96.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152346985 - NM_005431 XRCC2 0 . . . 8.55 84.64 23 5.6 Yes 20 0.58 No 0 0 No -22 0.62 No 38 40.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69102731 + NM_133509 RAD51B 0 . . . 2.81 74.69 28 5.32 No 0 0.09 No 0 0 No -27 0.84 Yes 48 80.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68570105 + NM_133509 RAD51B 0 . . . 1.1 0 29 5.48 No 60 0.47 No 0 0 No -31 0.66 No 48 34.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68479042 + NM_133509 RAD51B 0 . . . 6.25 80.78 10 5.56 Yes 13 1.16 Yes 0 0 No -50 0.8 Yes 45 78.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47714112 + NM_000251 MSH2 0 . . . 0.28 78.68 17 6.48 Yes 52 0.51 No 0 0 No -16 0.4 No 51 25.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68611079 + NM_133509 RAD51B 0 . . . 7.19 77.3 32 5.5 No -2 0.03 No 0 0 No -26 0.92 Yes 41 42.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7566986 - NM_000546 TP53 0 . . . 2.34 72.95 24 6.44 Yes 57 -3.82 No 0 0 No -26 0.48 No 47 47.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29097107 - NM_001005735 CHEK2 0 . . . 2.65 70.45 18 4.9 No -1 0.7 No 0 0 No -51 0.77 Yes 39 39.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68355792 + NM_133509 RAD51B 0 . . . 9.76 85.51 30 5.36 No 64 1.89 Yes 0 0 No -29 0.77 Yes 36 44.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59760593 - NM_032043 BRIP1 0 . . . 0.32 64.78 34 6.61 Yes 50 0.84 Yes 0 0 No -25 0.58 No 50 57.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21986192 - NM_000077 CDKN2A 0 . . . 1.54 80.87 20 5.65 Yes 55 0.23 No 0 0 No -19 0.79 Yes 52 56.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68895019 + NM_133509 RAD51B 0 . . . 3.08 0 30 5.29 No 14 1.02 Yes 0 0 No -32 0.64 No 37 62.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7574766 - NM_000546 TP53 0 . . . 3.19 67.82 24 5.2 No 36 0.62 No 0 0 No -23 0.68 Yes 53 40.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89660184 + NM_000314 PTEN 0 . . . 5.55 80.16 15 4.58 No 76 0.04 No 0 0 No -35 0.42 No 46 92.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59928371 - NM_032043 BRIP1 0 . . . 6.5 82.31 24 4.78 No 58 1.02 Yes 0 0 No -38 0.46 No 54 66.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68508633 + NM_133509 RAD51B 0 . . . 2.32 64.02 12 3.17 No 18 1.4 Yes 0 0 No -48 0.45 No 40 90.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68804856 + NM_133509 RAD51B 0 . . . 5.55 76.11 22 5.92 Yes 24 -3.48 No 0 0 No -26 0.51 No 45 62.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37080018 + NM_000249 MLH1 0 . . . 2.98 70.69 28 5.48 No 19 1 Yes 0 0 No -27 0.85 Yes 50 28.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68657845 + NM_133509 RAD51B 0 . . . 9.16 85.07 20 4.9 No -4 0.27 No 0 0 No -17 0.4 No 45 73.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152368735 - NM_005431 XRCC2 0 . . . 3.3 78.92 21 5.23 No 52 1.42 Yes 0 0 No -20 0.39 No 35 75.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69121083 + NM_133509 RAD51B 0 . . . 1.04 82.81 19 4.98 No 14 -1.01 No 0 0 No -26 0.74 Yes 44 32.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23648335 - NM_024675 PALB2 0 . . . 1.56 81.44 24 5.48 No 11 1.64 Yes 0 0 No -23 0.9 Yes 47 90.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32905965 + NM_000059 BRCA2 0 . . . 6.68 72.6 29 5.74 Yes -3 0.2 No 0 0 No -29 0.48 No 39 94.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105179091 + NM_021930 RINT1 0 . . . 9.48 84.9 39 7.07 Yes 2 1.16 Yes 0 0 No -25 0.5 No 47 78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68905669 + NM_133509 RAD51B 0 . . . 2.08 64.81 23 5.34 No 18 0.59 No 0 0 No -22 0.93 Yes 40 37.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152356712 - NM_005431 XRCC2 0 . . . 4.18 78.08 44 7.21 Yes 17 0.93 Yes 0 0 No -31 0.56 No 41 82.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21983541 - NM_000077 CDKN2A 0 . . . 0.75 70.59 38 6.41 Yes 54 -2.92 No 0 0 No -38 0.82 Yes 56 34.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56781853 + NM_058216 RAD51C 0 . . . 2.15 77.44 16 4.69 No 42 1.46 Yes 0 0 No -58 0.74 Yes 16 93.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40999209 + NM_001164269 RAD51 0 . . . 0.15 83.04 33 4.69 No 10 1.54 Yes 0 0 No -27 0.73 Yes 48 61.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105171471 + NM_021930 RINT1 0 . . . 1.11 77.55 28 5.38 No 58 -3.88 No 0 0 No -22 0.68 Yes 53 77.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47728160 + NM_000251 MSH2 0 . . . 4.91 82.31 20 5.75 Yes 58 1.16 Yes 0 0 No -29 0.59 No 39 64.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68854951 + NM_004360 CDH1 0 . . . 5.53 83.42 28 5.29 No 61 -4.64 No 0 0 No -27 0.72 Yes 48 71.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68834445 + NM_133509 RAD51B 0 . . . 1.36 72.82 48 6.84 Yes -2 0.12 No 0 0 No -30 0.66 No 60 46.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68332467 + NM_133509 RAD51B 0 . . . 3.72 76.77 29 5.87 Yes 33 1.03 Yes 0 0 No -28 0.86 Yes 48 41.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56788067 + NM_058216 RAD51C 0 . . . 1.64 59.82 41 6.79 Yes 50 -4.78 No 0 0 No -45 0.4 No 51 33.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68353519 + NM_133509 RAD51B 0 . . . 2.66 73.32 28 4.34 No 0 1.25 Yes 0 0 No -27 0.46 No 51 73.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32933835 + NM_000059 BRCA2 0 . . . 4.74 76.09 24 5.2 No 64 0.96 Yes 0 0 No -23 0.7 Yes 47 82.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94220337 - NM_005591 MRE11 0 . . . 4.46 73.53 21 6.32 Yes 54 1.51 Yes 0 0 No -20 0.72 Yes 45 58.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215665360 - NM_000465 BARD1 0 . . . 0.36 74.04 31 5.83 Yes 48 0.3 No 0 0 No -24 0.54 No 51 82.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68758129 + NM_133509 RAD51B 0 . . . 3.67 83 25 3.7 No 35 1.42 Yes 0 0 No -22 0.79 Yes 23 50.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21983771 - NM_000077 CDKN2A 0 . . . 1.7 62.16 29 5.27 No 43 -2.06 No 0 0 No -28 0.64 No 30 53.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47629811 + NM_000251 MSH2 0 . . . 2.69 72.14 16 4.58 No 75 -5.79 No 0 0 No -14 0.16 No 46 39.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68900132 + NM_133509 RAD51B 0 . . . 5.49 78.35 27 6.03 Yes 28 -1.4 No 0 0 No -25 0.62 No 45 63.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84382580 - NM_139076 FAM175A 0 . . . 1.19 72.57 17 4.79 No 45 0.98 Yes 0 0 No -16 0.54 No 23 66.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56811976 + NM_058216 RAD51C 0 . . . 2.32 84.41 36 6.13 Yes 21 0.79 Yes 0 0 No -18 0.41 No 37 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32900750 + NM_000059 BRCA2 0 . . . 4.61 79.84 20 5.1 No 48 0.26 No 0 0 No -22 0.43 No 45 72.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108173521 + NM_000051 ATM 0 . . . 6.05 85.37 25 5.38 No -1 0.64 No 0 0 No -24 0.77 Yes 40 88.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68574704 + NM_133509 RAD51B 0 . . . 4.58 66.76 32 5.92 Yes 59 -4.1 No 0 0 No -32 0.47 No 42 58.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41197087 - NM_007294 BRCA1 0 . . . 0.09 74.68 15 4.52 No 4 0.41 No 0 0 No -25 0.74 Yes 54 88.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68817509 + NM_004360 CDH1 0 . . . 3.83 79.38 23 4.35 No 28 1.33 Yes 0 0 No -23 0.85 Yes 47 64.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47670957 + NM_000251 MSH2 0 . . . 1.87 0 23 4.38 No -4 -0.76 No 0 0 No -30 0.79 Yes 34 84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89650674 + NM_000314 PTEN 0 . . . 2.36 72.58 38 5.97 Yes 73 -1.2 No 0 0 No -22 0.67 Yes 19 78.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68780041 + NM_004360 CDH1 0 . . . 4 69.72 23 4.86 No 71 0.78 Yes 0 0 No -22 0.59 No 44 81.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190728557 + NM_000534 PMS1 0 . . . 0.86 63.17 34 5.7 Yes 72 -5.99 No 0 0 No -20 0.53 No 53 41.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68586060 + NM_133509 RAD51B 0 . . . 3.97 75.24 16 5.91 Yes 75 1.11 Yes 0 0 No -22 0.79 Yes 29 85.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59760800 - NM_032043 BRIP1 0 . . . 1.84 73.07 54 5.94 Yes 76 -6.71 No 0 0 No -36 0.89 Yes 41 49.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215635502 - NM_000465 BARD1 0 . . . 2.7 82.64 39 6.71 Yes 19 0.53 No 0 0 No -31 0.93 Yes 52 40.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105191864 + NM_021930 RINT1 0 . . . 1.51 76.5 31 6.08 Yes 34 0.46 No 0 0 No -30 0.93 Yes 49 33.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69111580 + NM_133509 RAD51B 0 . . . 0.7 69.67 27 5.1 No 2 0.23 No 0 0 No -26 0.5 No 49 29.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56803876 + NM_058216 RAD51C 0 . . . 2.84 69.72 24 5.19 No NA NA NA 0 0 No -23 0.84 Yes 44 48.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59802280 - NM_032043 BRIP1 0 . . . 4 78.28 19 5.99 Yes -4 1.11 Yes 0 0 No -49 0.4 No 45 51.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47757321 + NM_000251 MSH2 0 . . . 13.19 90.93 20 5.47 No 73 -3.5 No 0 0 No -27 0.76 Yes 48 76.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68881856 + NM_133509 RAD51B 0 . . . 3.09 71.12 21 5.1 No 66 -3.96 No 0 0 No -24 0.35 No 46 42.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68432376 + NM_133509 RAD51B 0 . . . 6.36 86.21 12 4.1 No 51 1.76 Yes 0 0 No -26 0.59 No 38 38.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90997514 - NM_002485 NBN 0 . . . 3.11 75.39 20 4.28 No 41 1.08 Yes 0 0 No -37 0.39 No 47 36.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84402849 - NM_139076 FAM175A 0 . . . 7.84 86.45 27 3.75 No 60 -3.26 No 0 0 No -23 0.88 Yes 42 55.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68779226 + NM_004360 CDH1 0 . . . 3.95 72.38 21 4.9 No 50 -2.69 No 0 0 No -20 0.54 No 52 34.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68784688 + NM_004360 CDH1 0 . . . 3.91 81.57 41 5.94 Yes 47 -1.73 No 0 0 No -26 0.5 No 44 79.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215663834 - NM_000465 BARD1 0 . . . 7.25 93.61 9 3.87 No 31 1.19 Yes 0 0 No -23 0.87 Yes 35 46.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68513588 + NM_133509 RAD51B 0 . . . 3.48 79.94 34 6.85 Yes 64 1.36 Yes 0 0 No -27 0.66 No 44 67.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68290475 + NM_133509 RAD51B 0 . . . 8.66 83.55 17 6.93 Yes 72 0.92 Yes 0 0 No -27 0.55 No 53 47.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68783431 + NM_004360 CDH1 0 . . . 1.7 82.34 31 6.62 Yes 73 -3.94 No 0 0 No -26 0.38 No 34 69.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645860 - NM_024675 PALB2 0 . . . 1.23 0 33 6 Yes 70 1.4 Yes 0 0 No -31 0.89 Yes 38 81.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68831254 + NM_133509 RAD51B 0 . . . 3.52 77.17 14 5.74 Yes 46 -2.22 No 0 0 No -22 0.43 No 52 60.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47804612 + NM_000251 MSH2 0 . . . 2.17 73.2 24 4.04 No 2 0.71 No 0 0 No -44 0.64 No 47 87.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215597103 - NM_000465 BARD1 0 . . . 1.02 63.46 19 4.57 No 43 0.4 No 0 0 No -18 0.71 Yes 63 14.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108207624 + NM_000051 ATM 0 . . . 5.24 85.14 50 7.35 Yes 59 1.16 Yes 0 0 No -29 0.36 No 48 76.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59782802 - NM_032043 BRIP1 0 . . . 3.09 78.01 21 4.99 No 19 0.4 No 0 0 No -20 0.65 No 39 84.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108180797 + NM_000051 ATM 0 . . . 2.89 82.37 42 5.82 Yes 51 0.68 No 0 0 No -30 0.68 Yes 23 42.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152365222 - NM_005431 XRCC2 0 . . . 2.67 80.35 25 5.66 Yes 28 0.13 No 0 0 No -31 0.83 Yes 45 89.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68371322 + NM_133509 RAD51B 0 . . . 6.72 90.94 28 5.41 No 9 1.14 Yes 0 0 No -27 0.78 Yes 49 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23630420 - NM_024675 PALB2 0 . . . 0.86 62.03 28 5.39 No 55 1.39 Yes 0 0 No -27 0.92 Yes 48 65.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47678956 + NM_000251 MSH2 0 . . . 5.81 75.34 28 5.36 No 54 -1.14 No 0 0 No -33 0.36 No 38 53.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47717708 + NM_000251 MSH2 0 . . . 2.87 65.45 32 5.41 No 23 1.49 Yes 0 0 No -31 0.47 No 40 70.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69013878 + NM_133509 RAD51B 0 . . . 0.36 0 34 6.24 Yes 64 1.62 Yes 0 0 No -33 0.61 No 37 65.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190700947 + NM_000534 PMS1 0 . . . 4.57 81.33 42 5.49 No 8 1.68 Yes 0 0 No -31 0.65 No 45 93.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48021052 + NM_000179 MSH6 0 . . . 8.01 91.2 39 6.59 Yes 5 1.05 Yes 0 0 No -20 0.44 No 53 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48031320 + NM_000179 MSH6 0 . . . 0.42 71.93 32 5.47 No 48 0.73 No 0 0 No -31 0.38 No 12 40.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69039444 + NM_133509 RAD51B 0 . . . 9.14 78.46 48 7.05 Yes -3 1.49 Yes 0 0 No -27 0.87 Yes 54 50.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21966272 - NM_000077 CDKN2A 0 . . . 7.67 83.04 19 4.69 No 52 0.88 Yes 0 0 No -21 0.48 No 32 63.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47696613 + NM_000251 MSH2 0 . . . 0.89 67.3 28 4.08 No 54 0.63 No 0 0 No -25 0.4 No 36 35.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37084914 + NM_000249 MLH1 0 . . . 2.84 69.88 40 5.89 Yes 8 1.07 Yes 0 0 No -35 0.44 No 50 94.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41002411 + NM_001164269 RAD51 0 . . . 1.27 76.63 15 5.2 No 58 -3.88 No 0 0 No -28 0.28 No 43 57.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41217746 - NM_007294 BRCA1 0 . . . 2.35 56.07 17 4.8 No 9 0.86 Yes 0 0 No -21 0.24 No 42 85.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68819805 + NM_004360 CDH1 0 . . . 3.58 76.44 17 5.83 Yes 19 0.75 No 0 0 No -16 0.64 No 39 62.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90961824 - NM_002485 NBN 0 . . . 4.75 80.39 36 7.18 Yes 1 0.55 No 0 0 No -36 0.58 No 51 61.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68348511 + NM_133509 RAD51B 0 . . . 0.68 72.17 29 5.32 No 26 1.26 Yes 0 0 No -28 0.93 Yes 43 65.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48013795 + NM_000179 MSH6 0 . . . 0.01 68.67 18 5.93 Yes 72 0.79 Yes 0 0 No -28 0.53 No 50 70.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190738525 + NM_000534 PMS1 0 . . . 1.14 0 15 5.06 No 11 0.92 Yes 0 0 No -23 0.88 Yes 47 78.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59877001 - NM_032043 BRIP1 0 . . . 2.02 64.8 15 4.25 No 38 0.72 No 0 0 No -20 0.76 Yes 34 66.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190693325 + NM_000534 PMS1 0 . . . 4.82 78.58 17 4.8 No 28 0.51 No 0 0 No -39 0.88 Yes 44 65.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68587963 + NM_133509 RAD51B 0 . . . 2.36 59.77 26 4.99 No 65 0.46 No 0 0 No -25 0.87 Yes 41 58.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68800288 + NM_133509 RAD51B 0 . . . 7.3 92.74 28 5.38 No 15 0.11 No 0 0 No -28 0.53 No 49 90.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68800665 + NM_133509 RAD51B 0 . . . 3.04 71.16 23 6.05 Yes 26 1.31 Yes 0 0 No -22 0.58 No 36 73.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108145104 + NM_000051 ATM 0 . . . 7.17 83.4 17 4.8 No 74 1.02 Yes 0 0 No -20 0.62 No 26 75.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32888098 + NM_000059 BRCA2 0 . . . 7.46 83.32 22 5.27 No 75 0.34 No 0 0 No -21 0.75 Yes 46 39.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47752545 + NM_000251 MSH2 0 . . . 0.31 68.58 46 6.73 Yes 11 1.05 Yes 0 0 No -32 0.79 Yes 47 65.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68854941 + NM_133509 RAD51B 0 . . . 0.02 0 17 4.8 No 45 1.04 Yes 0 0 No -58 0.32 No 13 53.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190736404 + NM_000534 PMS1 0 . . . 4.5 81.51 31 5.83 Yes 54 1.6 Yes 0 0 No -30 0.75 Yes 34 49.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68402507 + NM_133509 RAD51B 0 . . . 9.92 94.62 18 5.83 Yes 14 1.51 Yes 0 0 No -27 0.41 No 44 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41005676 + NM_001164269 RAD51 0 . . . 6.24 82.31 14 4.24 No 59 1.05 Yes 0 0 No -25 0.79 Yes 55 59.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190697293 + NM_000534 PMS1 0 . . . 3.27 68.95 16 4.47 No 59 1.46 Yes 0 0 No -15 0.88 Yes 42 86.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215623842 - NM_000465 BARD1 0 . . . 4.57 84.41 17 4 No 52 0.81 Yes 0 0 No -54 0.43 No 42 74.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23629453 - NM_024675 PALB2 0 . . . 5.96 79.84 15 5.11 No 7 1.23 Yes 0 0 No -20 0.8 Yes 51 85.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47685139 + NM_000251 MSH2 0 . . . 1.14 0 20 3.81 No 24 0.58 No 0 0 No -23 0.56 No 34 90.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68655757 + NM_133509 RAD51B 0 . . . 1.76 78.68 52 7.08 Yes 64 0.2 No 0 0 No -24 0.51 No 46 60.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52439594 - NM_004656 BAP1 0 . . . 4.05 84.58 61 5.37 No 8 0.17 No 0 0 No -29 0.69 Yes 49 64.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104174480 - NM_001100119 XRCC3 0 . . . 0.4 65.74 28 4.53 No 61 -2.81 No 0 0 No -27 0.64 No 48 56.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68959068 + NM_133509 RAD51B 0 . . . 1.95 64.27 44 6.78 Yes 33 1.04 Yes 0 0 No -43 0.89 Yes 25 81.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108184162 + NM_000051 ATM 0 . . . 8.42 86.21 24 5.16 No 41 0.61 No 0 0 No -23 0.48 No 44 68.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41001782 + NM_001164269 RAD51 0 . . . 0.42 74.73 25 5.57 Yes 33 1.15 Yes 0 0 No -24 0.67 Yes 25 47.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215646576 - NM_000465 BARD1 0 . . . 6.46 77.99 34 5.86 Yes 64 0.63 No 0 0 No -28 0.64 No 39 60.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68772301 + NM_133509 RAD51B 0 . . . 1.4 74.97 21 5.2 No 0 0.18 No 0 0 No -29 0.49 No 50 52.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68978199 + NM_133509 RAD51B 0 . . . 0.11 67.63 31 5.58 Yes 76 -5.74 No 0 0 No -30 0.44 No 50 80.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56802753 + NM_058216 RAD51C 0 . . . 5.52 0 16 5.01 No 6 0.62 No 0 0 No -24 0.57 No 40 69.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950851 + NM_005732 RAD50 0 . . . 5.53 70.51 17 5.39 No 32 0.76 No 0 0 No -22 0.6 No 40 90.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32933889 + NM_000059 BRCA2 0 . . . 5.65 67.83 22 5.19 No 19 0.23 No 0 0 No -20 0.37 No 39 73.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32955476 + NM_000059 BRCA2 0 . . . 0.41 64 47 7.04 Yes 45 -4.44 No 0 0 No -44 0.46 No 50 43.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68711710 + NM_133509 RAD51B 0 . . . 3.78 85.1 13 4.45 No 4 0.99 Yes 0 0 No -28 0.35 No 42 54.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68313808 + NM_133509 RAD51B 0 . . . 4.33 67.16 43 5.42 No 41 1.57 Yes 0 0 No -17 0.36 No 52 69.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94156357 - NM_005591 MRE11 0 . . . 8.7 85.2 16 4.69 No 74 1.91 Yes 0 0 No -15 0.5 No 52 64.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7589158 - NM_000546 TP53 0 . . . 7.43 87.4 17 4.79 No 36 2.39 Yes 0 0 No -26 0.85 Yes 47 92.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131975097 + NM_005732 RAD50 0 . . . 1.82 81.06 27 5.48 No 40 -3.18 No 0 0 No -26 0.85 Yes 49 64.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29107829 - NM_001005735 CHEK2 0 . . . 3.85 58.45 23 5.38 No 35 1.29 Yes 0 0 No -22 0.81 Yes 37 92.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108237977 + NM_000051 ATM 0 . . . 3.24 68.34 23 4.27 No 21 1.06 Yes 0 0 No -22 0.88 Yes 37 70.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29139061 - NM_001005735 CHEK2 0 . . . 1.25 56.15 20 4.59 No 16 -0.44 No 0 0 No -32 0.43 No 42 66.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68705669 + NM_133509 RAD51B 0 . . . 5.13 72.11 36 6.08 Yes -1 1.06 Yes 0 0 No -19 0.41 No 32 69.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90968667 - NM_002485 NBN 0 . . . 3.3 77.82 27 4.96 No 24 0.31 No 0 0 No -26 0.48 No 34 85.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68554937 + NM_133509 RAD51B 0 . . . 1.01 0 22 4.9 No 33 1.17 Yes 0 0 No -42 0.39 No 48 59.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68815474 + NM_133509 RAD51B 0 . . . 0.29 61.21 65 8 Yes 34 1.01 Yes 0 0 No -31 0.5 No 24 37.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29138441 - NM_001005735 CHEK2 0 . . . 7.02 75.92 13 4.12 No 3 1.82 Yes 0 0 No -26 0.88 Yes 41 58.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89680231 + NM_000314 PTEN 0 . . . 0.6 65.69 25 6.17 Yes 68 -5.43 No 0 0 No -24 0.79 Yes 48 28.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131949958 + NM_005732 RAD50 0 . . . 1.36 67.95 12 4.8 No 71 -2.29 No 0 0 No -46 0.58 No 45 41.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68691905 + NM_133509 RAD51B 0 . . . 1.04 74.64 35 6.01 Yes 59 -5.61 No 0 0 No -35 0.69 Yes 50 59.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59763164 - NM_032043 BRIP1 0 . . . 4.68 80.94 18 4.69 No 40 -1.83 No 0 0 No -47 0.54 No 39 55.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68466330 + NM_133509 RAD51B 0 . . . 5.98 75.69 15 4.58 No -2 1.34 Yes 0 0 No -19 0.55 No 37 93.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215604367 - NM_000465 BARD1 0 . . . 2.84 69.82 32 5.74 Yes 28 0.67 No 0 0 No -26 0.52 No 42 79.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68739483 + NM_133509 RAD51B 0 . . . 6.07 85.25 30 5.73 Yes 30 -1.95 No 0 0 No -24 0.48 No 44 59.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37070014 + NM_000249 MLH1 0 . . . 0.7 0 33 6.24 Yes 13 0.31 No 0 0 No -32 0.93 Yes 50 62.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94170652 - NM_005591 MRE11 0 . . . 6.13 66.56 15 4.58 No 22 -1.33 No 0 0 No -14 0.56 No 43 86.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32910232 + NM_000059 BRCA2 0 . . . 0.12 0 25 6.55 Yes 36 1.06 Yes 0 0 No -27 0.48 No 43 70.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68791409 + NM_133509 RAD51B 0 . . . 5.41 81.38 39 5.78 Yes 5 1.15 Yes 0 0 No -33 0.33 No 47 44.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23652721 - NM_024675 PALB2 0 . . . 5.5 80.92 16 5.74 Yes 12 0.46 No 0 0 No -29 0.66 No 46 85.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68535770 + NM_133509 RAD51B 0 . . . 1.89 71.39 27 5.43 No 62 1.25 Yes 0 0 No -26 0.97 Yes 45 74.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7582501 - NM_000546 TP53 0 . . . 0.42 74.68 12 5.39 No 43 -2.19 No 0 0 No -26 0.35 No 54 73.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56777120 + NM_058216 RAD51C 0 . . . 2.77 0 20 6.87 Yes 23 0.13 No 0 0 No -28 0.72 Yes 47 85.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215635658 - NM_000465 BARD1 0 . . . 1.38 57.96 13 4.36 No 50 -5.45 No 0 0 No -45 0.36 No 37 48.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68318720 + NM_133509 RAD51B 0 . . . 2.87 82.9 21 5.14 No 28 0.25 No 0 0 No -20 0.67 Yes 51 58.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69144299 + NM_133509 RAD51B 0 . . . 3.78 0 20 6.63 Yes 43 1.81 Yes 0 0 No -19 0.83 Yes 15 79.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69050114 + NM_133509 RAD51B 0 . . . 3.92 83.49 17 4.69 No 75 -2.96 No 0 0 No -16 0.48 No 40 52.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47628505 + NM_000251 MSH2 0 . . . 0.33 84.22 33 5.38 No 76 1.69 Yes 0 0 No -25 0.57 No 50 42.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23653757 - NM_024675 PALB2 0 . . . 4.48 72.08 14 5.83 Yes 65 -5.2 No 0 0 No -30 0.41 No 51 57.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68992225 + NM_133509 RAD51B 0 . . . 1.43 63.75 33 5.84 Yes 22 -1.89 No 0 0 No -28 0.5 No 48 73.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69133774 + NM_133509 RAD51B 0 . . . 2.82 88.51 37 5.94 Yes 13 0.23 No 0 0 No -21 0.63 No 45 77.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68957872 + NM_133509 RAD51B 0 . . . 1.33 0 27 5.74 Yes 2 0.8 Yes 0 0 No -26 0.69 Yes 52 51.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29101382 - NM_001005735 CHEK2 0 . . . 1.28 0 21 4.8 No 14 0.3 No 0 0 No -20 0.7 Yes 40 86.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23628457 - NM_024675 PALB2 0 . . . 0.73 66.23 13 6 Yes 61 0.99 Yes 0 0 No -26 0.67 Yes 40 57.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33441646 - NM_002878 RAD51D 0 . . . 0.3 0 38 5.82 Yes 73 0.49 No 0 0 No -30 0.67 Yes 50 67.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47669801 + NM_000251 MSH2 0 . . . 0.39 58.59 14 6.47 Yes 43 0.68 No 0 0 No -23 0.46 No 58 30.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108187282 + NM_000051 ATM 0 . . . 2.33 59.13 19 10.97 Yes 21 1.57 Yes 0 0 No -29 0.76 Yes 46 59.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47675430 + NM_000251 MSH2 0 . . . 0.25 0 36 6.85 Yes 27 0.23 No 0 0 No -34 0.39 No 47 57.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68814391 + NM_004360 CDH1 0 . . . 2.24 80.12 21 4.9 No 7 1.16 Yes 0 0 No -21 0.59 No 51 77.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152368107 - NM_005431 XRCC2 0 . . . 0.76 74.26 25 4.9 No 33 0.72 No 0 0 No -22 0.47 No 20 65.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45801689 - NM_001048171 MUTYH 0 . . . 0.42 66.16 13 5.93 Yes 68 0.66 No 0 0 No -28 0.26 No 51 87.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90982570 - NM_002485 NBN 0 . . . 0.56 81.29 18 6.06 Yes 73 0.8 Yes 0 0 No -22 0.72 Yes 52 41.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89638207 + NM_000314 PTEN 0 . . . 1.05 69.58 36 9.19 Yes 76 0.44 No 0 0 No -35 0.65 No 53 39.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47695479 + NM_000251 MSH2 0 . . . 3.02 62.58 23 5.69 Yes 42 0.79 Yes 0 0 No -22 0.87 Yes 16 60.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47737529 + NM_000251 MSH2 0 . . . 7.58 88.18 16 5.83 Yes 52 0.72 No 0 0 No -15 0.26 No 47 53.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59796084 - NM_032043 BRIP1 0 . . . 0.94 71.37 14 6.4 Yes 22 0.12 No 0 0 No -34 0.39 No 31 73.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190701200 + NM_000534 PMS1 0 . . . 3.34 70.18 29 5.37 No 27 0.61 No 0 0 No -28 0.79 Yes 56 49.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215607622 - NM_000465 BARD1 0 . . . 3.21 68.48 21 5.2 No 73 0.2 No 0 0 No -27 0.46 No 34 55.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68341069 + NM_133509 RAD51B 0 . . . 1.55 70.27 23 5.18 No 27 0.58 No 0 0 No -20 0.47 No 31 38.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41011243 + NM_001164269 RAD51 0 . . . 0.42 74.95 23 5.19 No 41 1.31 Yes 0 0 No -22 0.52 No 48 63.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48027739 + NM_000179 MSH6 0 . . . 2.05 69.62 37 6 Yes 36 0.7 No 0 0 No -36 0.78 Yes 48 41.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56802956 + NM_058216 RAD51C 0 . . . 1.5 0 16 5.38 No 42 0.13 No 0 0 No -22 0.74 Yes 38 46.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47646466 + NM_000251 MSH2 0 . . . 7.29 78.95 15 4.58 No 13 0.63 No 0 0 No -35 0.38 No 45 61.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68708951 + NM_133509 RAD51B 0 . . . 3.84 86.04 48 6.02 Yes 8 0.93 Yes 0 0 No -32 0.42 No 50 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21985082 - NM_000077 CDKN2A 0 . . . 1.41 61.36 33 6.24 Yes 72 0.06 No 0 0 No -32 0.69 Yes 45 40.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89641003 + NM_000314 PTEN 0 . . . 5.42 74.19 36 5.54 No 71 -2.56 No 0 0 No -35 0.78 Yes 40 57.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1208937 + NM_000455 STK11 0 . . . 2.53 79.2 22 4.48 No 75 1.7 Yes 0 0 No -25 0.82 Yes 52 48.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152356166 - NM_005431 XRCC2 0 . . . 1.69 60.02 16 4.69 No 10 1.7 Yes 0 0 No -34 0.56 No 48 67.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89681069 + NM_000314 PTEN 0 . . . 4.47 91.05 36 7.73 Yes 13 -1.28 No 0 0 No -25 0.46 No 46 57.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215636737 - NM_000465 BARD1 0 . . . 4.4 79.64 15 5.91 Yes 64 -4.06 No 0 0 No -34 0.55 No 47 50.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68456833 + NM_133509 RAD51B 0 . . . 2.1 84.22 33 6.03 Yes 33 1.22 Yes 0 0 No -32 0.8 Yes 50 49.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68805271 + NM_133509 RAD51B 0 . . . 5.23 76.59 23 4.98 No 13 0.41 No 0 0 No -22 0.59 No 47 79.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190690292 + NM_000534 PMS1 0 . . . 2.27 69.41 17 6.08 Yes 66 0.17 No 0 0 No -25 0.7 Yes 44 60.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59842045 - NM_032043 BRIP1 0 . . . 1.2 73.52 16 5.48 No 74 -5.85 No 0 0 No -30 0.29 No 43 57.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68779461 + NM_133509 RAD51B 0 . . . 6.4 74.22 29 7.23 Yes 1 1.21 Yes 0 0 No -28 0.61 No 49 64.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131894016 + NM_005732 RAD50 0 . . . 4.61 77.7 18 6.05 Yes 71 -3.51 No 0 0 No -26 0.7 Yes 45 56.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69111886 + NM_133509 RAD51B 0 . . . 5.04 70.74 18 5.57 Yes 13 1.08 Yes 0 0 No -17 0.5 No 45 67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69003456 + NM_133509 RAD51B 0 . . . 6.12 72.31 24 4.32 No 2 0.99 Yes 0 0 No -23 0.73 Yes 48 65.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108159079 + NM_000051 ATM 0 . . . 1.58 84.21 13 4.36 No 69 0.67 No 0 0 No -40 0.61 No 49 56.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68313064 + NM_133509 RAD51B 0 . . . 5.65 75.37 24 6.48 Yes NA NA NA 0 0 No -23 0.76 Yes 20 51.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47793398 + NM_000251 MSH2 0 . . . 2.71 63.88 32 5.83 Yes 2 -0.73 No 0 0 No -31 0.49 No 40 43.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29114307 - NM_001005735 CHEK2 0 . . . 7.62 81.86 22 7.21 Yes 8 1.22 Yes 0 0 No -21 0.55 No 50 72.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68604835 + NM_133509 RAD51B 0 . . . 2.55 75.08 17 6.43 Yes 75 0.21 No 0 0 No -39 0.78 Yes 50 26.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68377623 + NM_133509 RAD51B 0 . . . 6.5 86.2 24 6.24 Yes 9 1.12 Yes 0 0 No -24 0.54 No 49 93.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68828128 + NM_004360 CDH1 0 . . . 2.79 0 22 5.04 No 15 1.03 Yes 0 0 No -21 0.86 Yes 43 92.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68847121 + NM_004360 CDH1 0 . . . 2.22 78.15 14 4.47 No 11 0.76 No 0 0 No -31 0.36 No 47 87.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47690572 + NM_000251 MSH2 0 . . . 3.23 72.84 37 6.97 Yes 46 0 No 0 0 No -36 0.92 Yes 45 84.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68339066 + NM_133509 RAD51B 0 . . . 2.39 71.8 22 3.96 No 14 0.6 No 0 0 No -45 0.41 No 44 49.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68781327 + NM_004360 CDH1 0 . . . 7.95 79.46 39 4.07 No 21 0.09 No 0 0 No -29 0.83 Yes 37 95.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69072439 + NM_133509 RAD51B 0 . . . 4.8 73.41 34 6.17 Yes 74 -1.86 No 0 0 No -26 0.76 Yes 48 38.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68439650 + NM_133509 RAD51B 0 . . . 5.64 71.82 20 5 No 13 1.13 Yes 0 0 No -19 0.76 Yes 40 77.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89672823 + NM_000314 PTEN 0 . . . 0.03 71.38 18 5.74 Yes 11 0.9 Yes 0 0 No -26 0.86 Yes 47 88.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37077916 + NM_000249 MLH1 0 . . . 3.22 75.68 17 5.44 No 46 -4.39 No 0 0 No -23 0.62 No 49 76.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89685820 + NM_000314 PTEN 0 . . . 3.91 66.92 25 6.78 Yes 47 0.52 No 0 0 No -27 0.53 No 46 60.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68704830 + NM_133509 RAD51B 0 . . . 2.59 73.84 24 3.98 No 38 1.65 Yes 0 0 No -23 0.74 Yes 20 92.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152365280 - NM_005431 XRCC2 0 . . . 2.37 73.75 26 5.29 No 45 0.3 No 0 0 No -25 0.94 Yes 49 62.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89700858 + NM_000314 PTEN 0 . . . 2.45 67.51 14 5.04 No 39 0.86 Yes 0 0 No -24 0.75 Yes 19 40.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6023251 - NM_000535 PMS2 0 . . . 2.71 85.22 55 5.21 No 48 0.17 No 0 0 No -29 0.62 No 47 51.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108194644 + NM_000051 ATM 0 . . . 4.32 86.28 17 5.83 Yes 8 0.45 No 0 0 No -56 0.3 No 50 53.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108110487 + NM_000051 ATM 0 . . . 6.09 79.33 24 5.83 Yes 65 1.2 Yes 0 0 No -24 0.65 No 44 54.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89728736 + NM_000314 PTEN 0 . . . 4.76 74.42 15 4.58 No 23 0.33 No 0 0 No -57 0.7 Yes 42 51.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68816229 + NM_004360 CDH1 0 . . . 7.59 80.4 24 6.16 Yes 76 -1.57 No 0 0 No -23 0.7 Yes 44 67.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68337740 + NM_133509 RAD51B 0 . . . 2.22 69.68 20 5.1 No 3 0.41 No 0 0 No -44 0.72 Yes 47 78.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69041527 + NM_133509 RAD51B 0 . . . 1.27 61.97 25 5.2 No -2 1 Yes 0 0 No -20 0.56 No 60 40.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68542984 + NM_133509 RAD51B 0 . . . 10 88.11 41 7.29 Yes 65 1.45 Yes 0 0 No -40 0.91 Yes 40 44.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32904470 + NM_000059 BRCA2 0 . . . 8.81 78.16 34 5.74 Yes 17 0.7 No 0 0 No -29 0.75 Yes 41 91.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75501602 - NM_001040108 MLH3 0 . . . 3.51 82.52 19 4.43 No 4 1.42 Yes 0 0 No -19 0.48 No 54 65.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68556754 + NM_133509 RAD51B 0 . . . 0.29 58.57 30 5.33 No 68 -6.7 No 0 0 No -24 0.45 No 48 55.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190710551 + NM_000534 PMS1 0 . . . 0.38 80.73 37 7.97 Yes 47 -2.58 No 0 0 No -36 0.62 No 47 84.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21984419 - NM_000077 CDKN2A 0 . . . 3.89 0 20 6 Yes 64 -4.18 No 0 0 No -19 0.84 Yes 39 28.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68566591 + NM_133509 RAD51B 0 . . . 7.72 79.37 30 5.88 Yes 70 -3.77 No 0 0 No -30 0.76 Yes 40 72.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59915123 - NM_032043 BRIP1 0 . . . 1.79 69.64 13 5.57 Yes 45 0.84 Yes 0 0 No -27 0.55 No 38 46.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68467409 + NM_133509 RAD51B 0 . . . 5.5 81.24 18 6.49 Yes 37 1.36 Yes 0 0 No -21 0.85 Yes 46 59.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32911349 + NM_000059 BRCA2 0 . . . 8.33 92.83 37 6.06 Yes 59 -4.39 No 0 0 No -31 0.71 Yes 43 73.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37085423 + NM_000249 MLH1 0 . . . 4.5 65.95 43 7 Yes 2 0.76 No 0 0 No -42 0.9 Yes 39 68.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68497626 + NM_133509 RAD51B 0 . . . 5.04 82.02 14 5.74 Yes 12 0.57 No 0 0 No -45 0.37 No 37 75.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68965208 + NM_133509 RAD51B 0 . . . 3.03 0 51 6.79 Yes 8 1.66 Yes 0 0 No -21 0.6 No 44 89.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47733533 + NM_000251 MSH2 0 . . . 1.29 67.89 16 5.57 Yes 61 -5.77 No 0 0 No -24 0.44 No 49 56.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37058030 + NM_000249 MLH1 0 . . . 0.53 0 19 7.07 Yes 44 0.59 No 0 0 No -18 0.53 No 52 40.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56792385 + NM_058216 RAD51C 0 . . . 7.02 84.82 22 6.24 Yes 47 0.12 No 0 0 No -21 0.67 Yes 51 66.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867742 - NM_032043 BRIP1 0 . . . 5.2 85.02 34 6.12 Yes 5 1.23 Yes 0 0 No -33 0.74 Yes 53 73.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90946908 - NM_002485 NBN 0 . . . 3.87 75.38 13 4.18 No 66 0.66 No 0 0 No -12 0.34 No 41 66.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131974579 + NM_005732 RAD50 0 . . . 5.52 85.09 45 6.59 Yes -1 0.03 No 0 0 No -30 0.64 No 52 65.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69084389 + NM_133509 RAD51B 0 . . . 2.6 69.06 27 6.52 Yes 61 1.76 Yes 0 0 No -26 0.56 No 33 59.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41018461 + NM_001164269 RAD51 0 . . . 3.97 84.41 28 5.39 No 76 -1.76 No 0 0 No -27 0.63 No 47 58.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68742064 + NM_133509 RAD51B 0 . . . 6.6 72.01 31 6.08 Yes 34 1 Yes 0 0 No -30 0.69 Yes 44 84.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68946128 + NM_133509 RAD51B 0 . . . 5.45 74.34 22 5.29 No 6 2.04 Yes 0 0 No -25 0.48 No 41 84.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21987558 - NM_000077 CDKN2A 0 . . . 7.1 81.18 28 6.13 Yes 46 -2.9 No 0 0 No -27 0.89 Yes 46 69.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69131396 + NM_133509 RAD51B 0 . . . 4.24 72.96 20 4.99 No 43 1.21 Yes 0 0 No -25 0.7 Yes 39 44.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68819832 + NM_133509 RAD51B 0 . . . 6.23 72.74 18 5.61 Yes 60 0.33 No 0 0 No -29 0.66 Yes 40 58.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215605761 - NM_000465 BARD1 0 . . . 2.13 72.96 26 4.79 No 1 0.31 No 0 0 No -25 0.89 Yes 39 62.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37087017 + NM_000249 MLH1 0 . . . 2.95 82.28 18 5.14 No 20 1.17 Yes 0 0 No -23 0.48 No 33 66.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215627207 - NM_000465 BARD1 0 . . . 6.26 76.19 20 5.1 No 52 -3.48 No 0 0 No -19 0.72 Yes 51 82.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75479260 - NM_001040108 MLH3 0 . . . 3.75 77.4 33 6.28 Yes 57 1.12 Yes 0 0 No -32 0.61 No 42 35.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94168293 - NM_005591 MRE11 0 . . . 0.9 64.86 31 5.74 Yes 60 0.58 No 0 0 No -30 0.91 Yes 14 47.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59787631 - NM_032043 BRIP1 0 . . . 1.02 68 16 5.21 No 55 0.4 No 0 0 No -22 0.73 Yes 38 85.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47706835 + NM_000251 MSH2 0 . . . 3.4 81.32 21 5.2 No 44 0.35 No 0 0 No -20 0.52 No 18 41.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68776968 + NM_133509 RAD51B 0 . . . 0.66 63.35 40 6.21 Yes 24 0.42 No 0 0 No -32 0.42 No 48 80.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94172066 - NM_005591 MRE11 0 . . . 5.87 73.34 36 6 Yes 61 0.63 No 0 0 No -26 0.61 No 48 57.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37052473 + NM_000249 MLH1 0 . . . 1.87 70.74 26 5.81 Yes 3 0.29 No 0 0 No -25 0.62 No 51 81.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94174897 - NM_005591 MRE11 0 . . . 3.15 68.34 41 6.85 Yes 13 0.86 Yes 0 0 No -29 0.44 No 40 90.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41269513 - NM_007294 BRCA1 0 . . . 3.01 68.06 30 5.43 No 20 1.7 Yes 0 0 No -29 0.82 Yes 43 76.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108147043 + NM_000051 ATM 0 . . . 2.53 72.49 30 5.46 No 43 2.27 Yes 0 0 No -29 0.69 Yes 55 41.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68850029 + NM_133509 RAD51B 0 . . . 5.67 87.39 15 4.58 No 71 1.73 Yes 0 0 No -32 0.36 No 47 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68294598 + NM_133509 RAD51B 0 . . . 7.08 91.83 26 5.9 Yes 49 0.87 Yes 0 0 No -25 0.92 Yes 37 57.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68596225 + NM_133509 RAD51B 0 . . . 4.21 75.54 29 5.57 Yes 8 0.11 No 0 0 No -28 0.61 No 46 53.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59935357 - NM_032043 BRIP1 0 . . . 5.11 71.84 27 5.19 No 57 0.88 Yes 0 0 No -26 0.85 Yes 37 62.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69136002 + NM_133509 RAD51B 0 . . . 3.62 73.59 20 8.3 Yes 64 0.88 Yes 0 0 No -19 0.85 Yes 48 31.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89633720 + NM_000314 PTEN 0 . . . 2.09 62.56 22 3.66 No 11 0.71 No 0 0 No -21 0.85 Yes 47 56.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48027544 + NM_000179 MSH6 0 . . . 1.23 60.84 27 6.41 Yes 3 0.25 No 0 0 No -26 0.72 Yes 42 81.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68994507 + NM_133509 RAD51B 0 . . . 3.17 73.06 14 4.94 No -4 0.05 No 0 0 No -43 0.91 Yes 51 31.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68520869 + NM_133509 RAD51B 0 . . . 0.87 69.07 32 4.8 No 7 0.61 No 0 0 No -51 0.42 No 45 93.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94202217 - NM_005591 MRE11 0 . . . 5.52 71.31 20 4.46 No 37 0.9 Yes 0 0 No -53 0.34 No 44 69.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59937556 - NM_032043 BRIP1 0 . . . 4.87 67.44 37 7.37 Yes 47 0.85 Yes 0 0 No -36 0.44 No 42 91.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190667758 + NM_000534 PMS1 0 . . . 2.27 79.25 27 5.04 No 12 -3.05 No 0 0 No -26 0.71 Yes 46 70.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68674802 + NM_133509 RAD51B 0 . . . 0.12 0 21 4.8 No 10 1.18 Yes 0 0 No -20 0.95 Yes 48 85.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108197739 + NM_000051 ATM 0 . . . 4.02 80.12 18 5.14 No 9 1.09 Yes 0 0 No -38 0.4 No 49 85.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68796388 + NM_004360 CDH1 0 . . . 3.62 73.74 29 5.92 Yes -4 0.82 Yes 0 0 No -28 0.54 No 48 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68801940 + NM_133509 RAD51B 0 . . . 0.15 79.76 27 4.52 No 62 -5.15 No 0 0 No -21 0.8 Yes 45 57.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59920864 - NM_032043 BRIP1 0 . . . 2.17 72.57 14 4.47 No 44 0.67 No 0 0 No -48 0.78 Yes 50 76.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94219348 - NM_005591 MRE11 0 . . . 2.46 61.33 20 3.98 No 14 0.15 No 0 0 No -19 0.92 Yes 44 36.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215655851 - NM_000465 BARD1 0 . . . 9.1 93.46 30 5.69 Yes 45 0.51 No 0 0 No -29 0.91 Yes 44 71.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105173340 + NM_021930 RINT1 0 . . . 1.07 62.63 22 6.73 Yes 48 -3.07 No 0 0 No -21 0.85 Yes 27 33.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68826251 + NM_004360 CDH1 0 . . . 0.78 84.22 18 4.58 No 33 1.17 Yes 0 0 No -26 0.36 No 25 31.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152355276 - NM_005431 XRCC2 0 . . . 2.39 76.63 20 5.09 No 64 -4.26 No 0 0 No -23 0.62 No 43 67.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68472219 + NM_133509 RAD51B 0 . . . 0.06 0 18 4.4 No 39 -3.15 No 0 0 No -50 0.8 Yes 44 77.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32934627 + NM_000059 BRCA2 0 . . . 3.19 0 17 4.58 No 45 1.11 Yes 0 0 No -40 0.55 No 56 20.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152349354 - NM_005431 XRCC2 0 . . . 2.27 71.36 51 7 Yes 76 -5.24 No 0 0 No -45 0.39 No 50 30.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131893102 + NM_005732 RAD50 0 . . . 4.03 85.22 29 5.92 Yes -1 0.23 No 0 0 No -28 0.85 Yes 48 61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68995938 + NM_133509 RAD51B 0 . . . 3.75 0 21 5.02 No 25 1.05 Yes 0 0 No -20 0.48 No 33 83.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69064798 + NM_133509 RAD51B 0 . . . 0.85 70.76 22 6.32 Yes 73 -6.27 No 0 0 No -21 0.96 Yes 48 91.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37075451 + NM_000249 MLH1 0 . . . 0.95 77.97 38 5.8 Yes 29 0.67 No 0 0 No -21 0.56 No 48 51.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807869 + NM_004360 CDH1 0 . . . 0.31 0 18 6.81 Yes 41 1.25 Yes 0 0 No -22 0.41 No 17 64.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105202244 + NM_021930 RINT1 0 . . . 6.21 82.31 25 5.29 No 4 0.68 No 0 0 No -24 0.92 Yes 54 69.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108127395 + NM_000051 ATM 0 . . . 7.01 75.15 28 5.39 No 6 1.66 Yes 0 0 No -27 0.91 Yes 35 67.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68773652 + NM_133509 RAD51B 0 . . . 1.02 83.36 24 6.18 Yes 7 1.03 Yes 0 0 No -31 0.4 No 51 88.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68311884 + NM_133509 RAD51B 0 . . . 3.38 80.73 29 5.92 Yes 44 -4.87 No 0 0 No -28 0.81 Yes 21 53.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47655957 + NM_000251 MSH2 0 . . . 8.38 86.11 14 5.39 No 76 0.99 Yes 0 0 No -26 0.78 Yes 45 62.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68420965 + NM_133509 RAD51B 0 . . . 2.62 70.68 22 5 No 47 -3.4 No 0 0 No -25 0.62 No 53 55.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90961592 - NM_002485 NBN 0 . . . 2.3 78.46 22 5.07 No 72 0.17 No 0 0 No -21 0.83 Yes 46 67.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68842256 + NM_004360 CDH1 0 . . . 4.75 73.26 24 6.32 Yes 57 0.05 No 0 0 No -23 0.88 Yes 16 50.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68490477 + NM_133509 RAD51B 0 . . . 2.12 78.99 19 4.5 No 63 0.59 No 0 0 No -29 0.34 No 46 44.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48010576 + NM_000179 MSH6 0 . . . 0.96 70.27 11 4.12 No -2 0.07 No 0 0 No -25 0.83 Yes 60 60.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68990788 + NM_133509 RAD51B 0 . . . 1.98 69.19 52 7.42 Yes 54 0.42 No 0 0 No -25 0.66 No 49 27.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56803540 + NM_058216 RAD51C 0 . . . 6.52 80.17 9 4.58 No 51 1.15 Yes 0 0 No -39 0.42 No 13 56.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6020932 - NM_000535 PMS2 0 . . . 4.25 71.58 24 4.59 No 48 -3.37 No 0 0 No -23 0.76 Yes 42 57.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68699350 + NM_133509 RAD51B 0 . . . 0.5 72.03 20 4.69 No 5 1.16 Yes 0 0 No -19 0.92 Yes 43 95.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105191784 + NM_021930 RINT1 0 . . . 4.96 67.67 9 3.87 No 59 0.55 No 0 0 No -29 0.9 Yes 48 73.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68519875 + NM_133509 RAD51B 0 . . . 2.9 57.88 28 6.11 Yes 63 0.83 Yes 0 0 No -27 0.52 No 33 86.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47720261 + NM_000251 MSH2 0 . . . 1.15 0 23 4.9 No 67 -1.86 No 0 0 No -22 0.83 Yes 45 80.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94182099 - NM_005591 MRE11 0 . . . 7.27 80.35 35 6.83 Yes 45 1.82 Yes 0 0 No -34 0.9 Yes 43 94.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68483316 + NM_133509 RAD51B 0 . . . 1.77 55.57 18 4.63 No 14 0.49 No 0 0 No -22 0.89 Yes 44 37.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68290831 + NM_133509 RAD51B 0 . . . 4.17 82.65 39 6.26 Yes 76 -3.27 No 0 0 No -32 0.74 Yes 28 66.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75511280 - NM_001040108 MLH3 0 . . . 2.75 0 35 6 Yes 24 0.82 Yes 0 0 No -34 0.94 Yes 25 77.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68619241 + NM_133509 RAD51B 0 . . . 5.02 76.65 21 4.63 No 46 0.02 No 0 0 No -21 0.72 Yes 41 82.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68720302 + NM_133509 RAD51B 0 . . . 0.17 65.07 14 4.45 No 64 0.91 Yes 0 0 No -49 0.45 No 42 95.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68379944 + NM_133509 RAD51B 0 . . . 7.37 76.71 14 5.22 No 20 1.09 Yes 0 0 No -21 0.47 No 38 55.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68449172 + NM_133509 RAD51B 0 . . . 0.53 68.64 28 5.74 Yes 28 -3.63 No 0 0 No -47 0.92 Yes 45 59.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94181769 - NM_005591 MRE11 0 . . . 0.46 0 16 4.35 No 24 1.31 Yes 0 0 No -21 0.84 Yes 34 68.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47641889 + NM_000251 MSH2 0 . . . 3.75 85.02 28 4.09 No 58 2.24 Yes 0 0 No -22 0.66 No 54 51.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89662859 + NM_000314 PTEN 0 . . . 0.44 0 23 3.51 No 46 1.63 Yes 0 0 No -22 0.54 No 47 45.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52445251 - NM_004656 BAP1 0 . . . 1.6 75.86 21 5.55 No 66 -4.76 No 0 0 No -20 0.34 No 46 31.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402347 + NM_133509 RAD51B 0 . . . 4.44 70.85 14 4.47 No 18 0.45 No 0 0 No -19 0.58 No 40 88.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59797876 - NM_032043 BRIP1 0 . . . 5.42 84.03 17 4.77 No 5 0.24 No 0 0 No -41 0.47 No 32 52.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90993647 - NM_002485 NBN 0 . . . 2.85 65.96 11 4.12 No 47 0.34 No 0 0 No -27 0.49 No 44 41.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47744891 + NM_000251 MSH2 0 . . . 2.99 68.5 36 5.72 Yes 56 1.74 Yes 0 0 No -30 0.48 No 55 53.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108178238 + NM_000051 ATM 0 . . . 0.39 0 46 9.09 Yes -1 0.41 No 0 0 No -39 0.64 No 12 59.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94176973 - NM_005591 MRE11 0 . . . 2.35 77.04 27 5.39 No 67 0.81 Yes 0 0 No -26 0.75 Yes 51 57.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37041791 + NM_000249 MLH1 0 . . . 4.11 73.32 13 3.61 No -3 0.47 No 0 0 No -24 0.46 No 54 46.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47792861 + NM_000251 MSH2 0 . . . 5.03 73.89 31 7.51 Yes 22 0.45 No 0 0 No -23 0.55 No 51 64.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68394776 + NM_133509 RAD51B 0 . . . 5.56 71.25 18 4.9 No 2 0.94 Yes 0 0 No -18 0.37 No 39 55.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108207075 + NM_000051 ATM 0 . . . 2.73 80.47 33 5.66 Yes 69 -3.35 No 0 0 No -32 0.48 No 48 31.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104177052 - NM_001100119 XRCC3 0 . . . 4.64 84.17 15 5.65 Yes 39 0.03 No 0 0 No -25 0.58 No 44 51.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68387454 + NM_133509 RAD51B 0 . . . 8.23 75.25 54 7.14 Yes 11 0.5 No 0 0 No -23 0.76 Yes 44 58.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108204497 + NM_000051 ATM 0 . . . 0.53 74.22 21 4.8 No 57 0.87 Yes 0 0 No -25 0.42 No 46 46.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68432587 + NM_133509 RAD51B 0 . . . 1.69 59.32 20 5.8 Yes 74 1.37 Yes 0 0 No -27 0.34 No 44 46.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68786659 + NM_133509 RAD51B 0 . . . 10.72 88.62 28 5.48 No 64 0.76 No 0 0 No -27 0.54 No 43 48.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69021775 + NM_133509 RAD51B 0 . . . 0.57 77.77 25 4.67 No 19 -3.36 No 0 0 No -22 0.76 Yes 15 50.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68891185 + NM_133509 RAD51B 0 . . . 5.14 76.2 27 5.46 No 0 1.19 Yes 0 0 No -26 0.73 Yes 45 75.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32915487 + NM_000059 BRCA2 0 . . . 3.84 79.19 21 6.93 Yes 67 0.36 No 0 0 No -20 0.85 Yes 41 25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94152741 - NM_005591 MRE11 0 . . . 5.4 92.7 24 4.82 No 3 0.95 Yes 0 0 No -23 0.55 No 51 50.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68311383 + NM_133509 RAD51B 0 . . . 0.81 69.73 46 7.93 Yes 22 -3.53 No 0 0 No -23 0.35 No 19 60.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59837107 - NM_032043 BRIP1 0 . . . 4.11 80.76 21 4.92 No 58 1.33 Yes 0 0 No -25 0.58 No 46 47.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89678237 + NM_000314 PTEN 0 . . . 2.67 78.01 12 5.74 Yes 61 1.29 Yes 0 0 No -52 0.81 Yes 52 47.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56786013 + NM_058216 RAD51C 0 . . . 2.86 69.59 36 5.99 Yes 34 -1.13 No 0 0 No -35 0.61 No 42 59.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68841495 + NM_133509 RAD51B 0 . . . 3.49 60.17 12 4.55 No 48 0.31 No 0 0 No -26 0.92 Yes 39 46.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68941772 + NM_133509 RAD51B 0 . . . 4.23 77.74 16 4.56 No 65 1.45 Yes 0 0 No -18 0.78 Yes 48 83.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69055070 + NM_133509 RAD51B 0 . . . 4.21 84.71 21 5.13 No 41 -2.79 No 0 0 No -20 0.5 No 46 67.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41001300 + NM_001164269 RAD51 0 . . . 1.63 67.32 16 5.1 No 68 -6.51 No 0 0 No -19 0.52 No 48 31.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402688 + NM_133509 RAD51B 0 . . . 0.76 79.67 13 4.8 No 12 0.14 No 0 0 No -21 0.3 No 46 63.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68878555 + NM_133509 RAD51B 0 . . . 4.26 74.21 25 4.88 No 62 1.22 Yes 0 0 No -22 0.49 No 28 54.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56784149 + NM_058216 RAD51C 0 . . . 1.57 73.45 46 7.14 Yes 17 1.34 Yes 0 0 No -22 0.87 Yes 41 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32892123 + NM_000059 BRCA2 0 . . . 6.23 87.92 17 3.03 No 63 0.2 No 0 0 No -26 0.54 No 47 90.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68645609 + NM_133509 RAD51B 0 . . . 10.02 91.11 25 5.33 No 69 1.24 Yes 0 0 No -24 0.37 No 50 62.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29134132 - NM_001005735 CHEK2 0 . . . 1.93 73.58 17 5.54 No 48 0.04 No 0 0 No -30 0.49 No 46 39.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108196795 + NM_000051 ATM 0 . . . 0.03 0 28 3.68 No 34 0.32 No 0 0 No -25 0.45 No 33 91.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68459208 + NM_133509 RAD51B 0 . . . 0.61 81.17 28 5.29 No 10 0.36 No 0 0 No -55 0.86 Yes 48 87.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68696137 + NM_133509 RAD51B 0 . . . 5.94 72.48 17 5.66 Yes 44 0.17 No 0 0 No -28 0.51 No 56 43.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6010532 - NM_000535 PMS2 0 . . . 3.64 84.96 20 5.3 No 3 0.79 Yes 0 0 No -27 0.61 No 44 55.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68626692 + NM_133509 RAD51B 0 . . . 4.25 75.12 17 6.3 Yes 43 0.15 No 0 0 No -16 0.63 No 45 71.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6018033 - NM_000535 PMS2 0 . . . 0.05 74.68 22 6.86 Yes 61 0.99 Yes 0 0 No -21 0.83 Yes 36 59.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68690517 + NM_133509 RAD51B 0 . . . 3.69 71.56 51 5.63 Yes 12 1.08 Yes 0 0 No -23 0.64 No 41 83.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59773090 - NM_032043 BRIP1 0 . . . 2.34 62.9 14 4.47 No 57 1.2 Yes 0 0 No -43 0.7 Yes 43 72.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41242982 - NM_007294 BRCA1 0 . . . 2.9 81.4 23 4.67 No 4 0.49 No 0 0 No -22 0.87 Yes 54 76.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47714654 + NM_000251 MSH2 0 . . . 8.01 82.76 12 4.24 No 51 -0.55 No 0 0 No -39 0.66 No 44 49.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47647627 + NM_000251 MSH2 0 . . . 2.24 71.37 23 5.29 No 44 1.4 Yes 0 0 No -22 0.8 Yes 43 54.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89733052 + NM_000314 PTEN 0 . . . 0.8 73.69 24 5.29 No 74 0.36 No 0 0 No -23 0.69 Yes 46 39.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68910590 + NM_133509 RAD51B 0 . . . 3.97 81.95 37 6.37 Yes 75 0.52 No 0 0 No -37 0.69 Yes 38 45.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68309573 + NM_133509 RAD51B 0 . . . 3.62 69.2 34 8 Yes 60 -3.59 No 0 0 No -33 0.87 Yes 46 66.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68825374 + NM_133509 RAD51B 0 . . . 4.22 68.08 15 5.1 No 67 1 Yes 0 0 No -55 0.44 No 37 82.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68783003 + NM_004360 CDH1 0 . . . 3.68 70.85 19 5.48 No 23 1.58 Yes 0 0 No -25 0.63 No 40 73.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68737353 + NM_133509 RAD51B 0 . . . 5.09 72.51 25 5.29 No 26 0.55 No 0 0 No -21 0.58 No 51 38.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68496137 + NM_133509 RAD51B 0 . . . 1.99 0 27 5.74 Yes 33 1.23 Yes 0 0 No -26 0.92 Yes 25 41.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59853291 - NM_032043 BRIP1 0 . . . 3.47 79.59 9 3.87 No 8 0.3 No 0 0 No -22 0.9 Yes 39 59.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68458539 + NM_133509 RAD51B 0 . . . 0.13 0 23 4.8 No 56 -3.4 No 0 0 No -22 0.84 Yes 47 55.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89649008 + NM_000314 PTEN 0 . . . 6.6 90.47 15 5.39 No 12 1.17 Yes 0 0 No -25 0.21 No 46 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108144199 + NM_000051 ATM 0 . . . 2.95 69.22 44 5.82 Yes 45 0.89 Yes 0 0 No -31 0.43 No 38 56.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37054149 + NM_000249 MLH1 0 . . . 6.7 79.48 19 4.47 No 33 0.75 No 0 0 No -18 0.86 Yes 43 88.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75481549 - NM_001040108 MLH3 0 . . . 2.75 72.32 32 7.42 Yes 61 -5.13 No 0 0 No -31 0.6 No 50 78.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48035247 + NM_000179 MSH6 0 . . . 4.78 87.28 15 5.47 No 49 0.3 No 0 0 No -30 0.3 No 48 72.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68870815 + NM_133509 RAD51B 0 . . . 3.62 80.92 19 5.58 Yes 24 0.56 No 0 0 No -21 0.52 No 50 63.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69017774 + NM_133509 RAD51B 0 . . . 1.02 0 12 5.46 No 12 -1.88 No 0 0 No -25 0.17 No 43 55.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84382903 - NM_139076 FAM175A 0 . . . 2.01 79.85 16 5.2 No 50 1.22 Yes 0 0 No -20 0.75 Yes 45 83.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59828116 - NM_032043 BRIP1 0 . . . 1.01 68.65 31 5.83 Yes 65 0.85 Yes 0 0 No -30 0.63 No 61 47.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29089329 - NM_001005735 CHEK2 0 . . . 3.02 77.35 30 5.48 No 6 0.53 No 0 0 No -29 0.6 No 48 43.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41200578 - NM_007294 BRCA1 0 . . . 1.43 78.46 32 6.15 Yes 58 -4.72 No 0 0 No -31 0.63 No 55 39.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29090259 - NM_001005735 CHEK2 0 . . . 0.27 79.01 32 5.13 No 57 0.46 No 0 0 No -34 0.39 No 31 70.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59762889 - NM_032043 BRIP1 0 . . . 6.85 0 14 3.68 No 61 0.09 No 0 0 No -23 0.71 Yes 32 31.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69076404 + NM_133509 RAD51B 0 . . . 0.69 0 22 7.28 Yes 4 -0.35 No 0 0 No -21 0.68 Yes 54 41.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68526102 + NM_133509 RAD51B 0 . . . 3.41 74.08 51 5.86 Yes 48 1.23 Yes 0 0 No -40 0.87 Yes 15 60.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59935318 - NM_032043 BRIP1 0 . . . 4.77 73.33 82 7.35 Yes 3 1.2 Yes 0 0 No -23 0.75 Yes 38 74.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68493638 + NM_133509 RAD51B 0 . . . 2.29 74.15 12 4.14 No 39 0.67 No 0 0 No -26 0.56 No 49 95.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108130459 + NM_000051 ATM 0 . . . 2.09 71.97 31 5.8 Yes 26 0.3 No 0 0 No -29 0.87 Yes 53 56.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104179077 - NM_001100119 XRCC3 0 . . . 4.61 73.49 24 4.89 No 59 -0.71 No 0 0 No -23 0.81 Yes 48 68.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23648695 - NM_024675 PALB2 0 . . . 2.13 63.78 40 6.4 Yes 53 -3.73 No 0 0 No -39 0.59 No 39 61.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48034868 + NM_000179 MSH6 0 . . . 0.39 63.43 22 5 No 11 1 Yes 0 0 No -21 0.92 Yes 42 64.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68596478 + NM_133509 RAD51B 0 . . . 1.5 0 19 5.3 No 53 0.06 No 0 0 No -24 0.83 Yes 49 88.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131967422 + NM_005732 RAD50 0 . . . 4.52 85.67 20 6 Yes 67 -3.77 No 0 0 No -29 0.51 No 46 46.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69055009 + NM_133509 RAD51B 0 . . . 1.21 68.57 18 4.58 No 63 -3.99 No 0 0 No -20 0.53 No 52 69.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89659624 + NM_000314 PTEN 0 . . . 4.38 70.9 32 6 Yes 58 1.3 Yes 0 0 No -31 0.84 Yes 46 31.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68477897 + NM_133509 RAD51B 0 . . . 5.62 72.52 14 6.24 Yes 37 1.16 Yes 0 0 No -32 0.73 Yes 44 80.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48015414 + NM_000179 MSH6 0 . . . 4.74 84.41 12 5.1 No 49 2.08 Yes 0 0 No -24 0.59 No 29 83.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94176887 - NM_005591 MRE11 0 . . . 2.28 67.03 29 5.56 Yes 19 0.75 No 0 0 No -29 0.55 No 39 87.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68516445 + NM_133509 RAD51B 0 . . . 7.01 85.58 34 5.29 No 41 0.14 No 0 0 No -26 0.59 No 45 88.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90983329 - NM_002485 NBN 0 . . . 3.73 80.41 25 3.76 No 41 0.65 No 0 0 No -25 0.74 Yes 52 34.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84386098 - NM_139076 FAM175A 0 . . . 2.16 65.25 13 4.36 No 74 0.77 No 0 0 No -23 0.55 No 13 25.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7579071 - NM_000546 TP53 0 . . . 3.08 73.61 31 5.92 Yes 76 2.04 Yes 0 0 No -30 0.53 No 48 60.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29108353 - NM_001005735 CHEK2 0 . . . 4.21 91.65 27 6 Yes 27 0.77 No 0 0 No -26 0.94 Yes 31 93.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47741589 + NM_000251 MSH2 0 . . . 1.63 60.12 39 6.35 Yes 38 1.85 Yes 0 0 No -23 0.9 Yes 42 40.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68741638 + NM_133509 RAD51B 0 . . . 0.25 68.01 36 6.32 Yes 7 -2.53 No 0 0 No -24 0.67 Yes 25 72.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68807722 + NM_133509 RAD51B 0 . . . 0.74 0 17 4.74 No 9 1.47 Yes 0 0 No -21 0.34 No 40 56.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131927929 + NM_005732 RAD50 0 . . . 1.61 69.97 26 5.28 No 9 0.24 No 0 0 No -25 0.42 No 45 43.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89639867 + NM_000314 PTEN 0 . . . 1.46 84.33 34 7.71 Yes 0 0.6 No 0 0 No -33 0.63 No 51 85.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68403628 + NM_133509 RAD51B 0 . . . 5.43 78.08 15 6.24 Yes 38 0.95 Yes 0 0 No -32 0.32 No 51 39.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33433432 - NM_002878 RAD51D 0 . . . 3.45 80.4 53 5.63 Yes 59 -4.76 No 0 0 No -47 0.75 Yes 32 65.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59772595 - NM_032043 BRIP1 0 . . . 3.09 0 17 5.66 Yes 46 0.44 No 0 0 No -17 0.5 No 45 76.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215611209 - NM_000465 BARD1 0 . . . 1.02 0 16 4.53 No 38 1.8 Yes 0 0 No -22 0.74 Yes 20 95.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41003200 + NM_001164269 RAD51 0 . . . 1.79 64.27 33 5.82 Yes 8 0.63 No 0 0 No -32 0.7 Yes 30 70.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131940763 + NM_005732 RAD50 0 . . . 1.71 0 46 5.22 No 21 0.57 No 0 0 No -38 0.39 No 37 73.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215599183 - NM_000465 BARD1 0 . . . 0.23 74.41 14 4.12 No 31 1.07 Yes 0 0 No -32 0.77 Yes 45 41.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68664573 + NM_133509 RAD51B 0 . . . 2.46 68.94 24 6.35 Yes 69 1.31 Yes 0 0 No -23 0.76 Yes 34 66.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94184055 - NM_005591 MRE11 0 . . . 6.79 83.71 20 7.14 Yes 63 1.31 Yes 0 0 No -19 0.58 No 48 45.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68789346 + NM_133509 RAD51B 0 . . . 1.74 0 22 6.07 Yes 70 1 Yes 0 0 No -21 0.84 Yes 46 69.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94182287 - NM_005591 MRE11 0 . . . 4.7 80.58 64 6.36 Yes 35 0.91 Yes 0 0 No -41 0.63 No 33 76.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94221129 - NM_005591 MRE11 0 . . . 1.75 69.39 24 5.1 No 33 1.1 Yes 0 0 No -23 0.86 Yes 44 73.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68682764 + NM_133509 RAD51B 0 . . . 4.05 72.5 16 4.24 No 72 0.2 No 0 0 No -15 0.88 Yes 40 53.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131959947 + NM_005732 RAD50 0 . . . 6.73 75.26 19 4.69 No 17 0.95 Yes 0 0 No -44 0.58 No 41 83.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68721093 + NM_133509 RAD51B 0 . . . 0.01 64.72 44 6.58 Yes 35 0.06 No 0 0 No -25 0.75 Yes 20 62.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68599611 + NM_133509 RAD51B 0 . . . 4.7 88.15 18 6.05 Yes 66 -4.34 No 0 0 No -21 0.55 No 39 86.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41257117 - NM_007294 BRCA1 0 . . . 4.32 77.04 35 6.32 Yes 16 1.02 Yes 0 0 No -24 0.83 Yes 42 56.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41267949 - NM_007294 BRCA1 0 . . . 1.31 0 17 5.29 No 63 0.31 No 0 0 No -25 0.49 No 33 64.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68512327 + NM_133509 RAD51B 0 . . . 5.35 86.73 37 7.4 Yes 5 0.1 No 0 0 No -36 0.34 No 50 90.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68886268 + NM_133509 RAD51B 0 . . . 1.19 76.12 26 5.2 No 21 0.13 No 0 0 No -25 0.88 Yes 37 63.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68788457 + NM_004360 CDH1 0 . . . 5.54 81.4 22 6.31 Yes 48 0.81 Yes 0 0 No -27 0.45 No 47 63.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68769689 + NM_133509 RAD51B 0 . . . 2.75 79.82 22 6.85 Yes 75 -3.29 No 0 0 No -21 0.96 Yes 49 92.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69015646 + NM_133509 RAD51B 0 . . . 0.22 0 19 4.58 No 43 2.12 Yes 0 0 No -18 0.76 Yes 15 38.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108165907 + NM_000051 ATM 0 . . . 0.89 0 24 5.1 No -1 -1.32 No 0 0 No -30 0.75 Yes 43 88.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7587738 - NM_000546 TP53 0 . . . 2.44 68.21 23 6.68 Yes 41 1.12 Yes 0 0 No -22 0.92 Yes 17 50.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48027789 + NM_000179 MSH6 0 . . . 2.32 75.65 14 5.39 No 60 -4.67 No 0 0 No -13 0.15 No 41 38.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68887598 + NM_133509 RAD51B 0 . . . 3.33 73.93 20 6.15 Yes 49 1.02 Yes 0 0 No -19 0.52 No 45 79.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68777314 + NM_133509 RAD51B 0 . . . 0.09 74.68 27 6.16 Yes 4 0.41 No 0 0 No -26 0.77 Yes 54 62.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37078389 + NM_000249 MLH1 0 . . . 2.85 74.01 21 5 No 67 1.68 Yes 0 0 No -20 0.56 No 48 86.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190719987 + NM_000534 PMS1 0 . . . 3.12 72.22 28 4.23 No 65 0.83 Yes 0 0 No -27 0.85 Yes 46 26.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94159394 - NM_005591 MRE11 0 . . . 2.69 82.6 9 5.59 Yes 6 0.55 No 0 0 No -27 0.46 No 27 52.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94219824 - NM_005591 MRE11 0 . . . 0.6 0 14 4.28 No 13 1.06 Yes 0 0 No -17 0.66 No 45 89.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59874224 - NM_032043 BRIP1 0 . . . 0.83 73.98 28 5.38 No 42 0.98 Yes 0 0 No -28 0.51 No 51 83.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52436778 - NM_004656 BAP1 0 . . . 2.94 79.21 18 4.8 No -2 0.57 No 0 0 No -58 0.33 No 50 78.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32912189 + NM_000059 BRCA2 0 . . . 3.82 79.27 21 4.64 No 4 0.92 Yes 0 0 No -26 0.83 Yes 40 89.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32946692 + NM_000059 BRCA2 0 . . . 1.28 69.04 21 5.2 No 7 0.1 No 0 0 No -20 0.46 No 51 96.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68790673 + NM_133509 RAD51B 0 . . . 3.77 75.13 23 4.82 No 49 -3.87 No 0 0 No -35 0.65 No 52 35.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68879227 + NM_133509 RAD51B 0 . . . 7.15 82.72 12 4.24 No 62 1.06 Yes 0 0 No -28 0.61 No 44 84.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32947757 + NM_000059 BRCA2 0 . . . 8.57 87.65 20 4.87 No 8 1.3 Yes 0 0 No -24 0.4 No 38 42.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68982374 + NM_133509 RAD51B 0 . . . 1.79 82.27 34 5.89 Yes 16 -3.08 No 0 0 No -33 0.87 Yes 16 61.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89674136 + NM_000314 PTEN 0 . . . 1.94 0 23 5.89 Yes 18 0.81 Yes 0 0 No -22 0.8 Yes 32 74.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68633753 + NM_133509 RAD51B 0 . . . 6.05 83.08 27 5.06 No 59 1 Yes 0 0 No -24 0.62 No 49 63.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48034921 + NM_000179 MSH6 0 . . . 5.04 79.22 29 6.31 Yes 64 0.99 Yes 0 0 No -28 0.8 Yes 46 40.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29082999 - NM_001005735 CHEK2 0 . . . 4.6 68.44 17 4.92 No 54 -4.63 No 0 0 No -23 0.35 No 43 58.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37046124 + NM_000249 MLH1 0 . . . 1.19 74.14 31 5.31 No 67 0.32 No 0 0 No -31 0.41 No 25 69.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68292984 + NM_133509 RAD51B 0 . . . 6.17 74.53 17 4.8 No 14 2.32 Yes 0 0 No -19 0.51 No 44 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32888739 + NM_000059 BRCA2 0 . . . 1.29 74.68 29 4.02 No 4 0.1 No 0 0 No -28 0.75 Yes 54 81.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29129740 - NM_001005735 CHEK2 0 . . . 2.24 80.12 17 7.68 Yes 7 1.16 Yes 0 0 No -29 0.46 No 51 72.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68573812 + NM_133509 RAD51B 0 . . . 6.32 75.33 17 5.38 No 70 1.14 Yes 0 0 No -22 0.36 No 43 68.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131942227 + NM_005732 RAD50 0 . . . 0.3 74.92 21 5.81 Yes 59 -4.59 No 0 0 No -21 0.27 No 52 82.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47804003 + NM_000251 MSH2 0 . . . 9.7 94.56 37 6 Yes 29 0.76 No 0 0 No -24 0.49 No 49 89.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41011441 + NM_001164269 RAD51 0 . . . 3.25 80.12 32 7.46 Yes 8 1.06 Yes 0 0 No -27 0.59 No 50 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108098615 + NM_000051 ATM 0 . . . 5.7 78.12 21 4.36 No 74 -3.48 No 0 0 No -20 0.87 Yes 45 52.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215602236 - NM_000465 BARD1 0 . . . 0.38 0 47 6.33 Yes -2 0.19 No 0 0 No -27 0.46 No 48 72.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68850407 + NM_004360 CDH1 0 . . . 3.5 63.88 26 5.89 Yes 45 0.08 No 0 0 No -25 0.87 Yes 47 91.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90956355 - NM_002485 NBN 0 . . . 3.28 0 30 5.38 No 9 1.09 Yes 0 0 No -24 0.8 Yes 34 66.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59893110 - NM_032043 BRIP1 0 . . . 3.22 80.95 10 3.6 No 30 0.86 Yes 0 0 No -30 0.7 Yes 47 44.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32945499 + NM_000059 BRCA2 0 . . . 4.38 77.67 38 5.98 Yes 33 0.86 Yes 0 0 No -23 0.39 No 32 78.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69075704 + NM_133509 RAD51B 0 . . . 7.17 81.88 20 5.1 No 7 1.39 Yes 0 0 No -19 0.85 Yes 51 65.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90971881 - NM_002485 NBN 0 . . . 2.99 75.95 21 3.78 No 33 1.28 Yes 0 0 No -46 0.79 Yes 50 87.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68846914 + NM_004360 CDH1 0 . . . 3.82 76.96 45 6.98 Yes 51 -4.31 No 0 0 No -32 0.34 No 43 63.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68651294 + NM_133509 RAD51B 0 . . . 3.01 76.6 15 5.74 Yes 11 0.24 No 0 0 No -28 0.51 No 41 69.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68293066 + NM_133509 RAD51B 0 . . . 4.17 79.32 26 5.65 Yes 15 0.07 No 0 0 No -23 0.44 No 43 82.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48029461 + NM_000179 MSH6 0 . . . 5.29 0 39 6.24 Yes 53 0.05 No 0 0 No -32 0.57 No 40 41.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68671002 + NM_133509 RAD51B 0 . . . 4.15 84.86 21 4.9 No 67 0.87 Yes 0 0 No -20 0.76 Yes 46 82.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68836788 + NM_133509 RAD51B 0 . . . 4.06 71.67 19 5.38 No 4 1.65 Yes 0 0 No -22 0.74 Yes 45 39.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59941829 - NM_032043 BRIP1 0 . . . 5.02 77.95 9 5.57 Yes 65 0.34 No 0 0 No -24 0.79 Yes 39 82.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131917490 + NM_005732 RAD50 0 . . . 7.44 80.24 29 5.91 Yes 71 -4.72 No 0 0 No -28 0.78 Yes 50 69.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131929262 + NM_005732 RAD50 0 . . . 4.89 82.58 15 4.58 No 2 0.32 No 0 0 No -55 0.27 No 48 70.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69124126 + NM_133509 RAD51B 0 . . . 5.16 86.85 27 6.06 Yes 66 0.74 No 0 0 No -26 0.86 Yes 43 58.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104180631 - NM_001100119 XRCC3 0 . . . 2.6 64.33 11 5 No 17 2.03 Yes 19 0.41 Yes -43 0.62 No 41 92.18 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 94177369 - NM_005591 MRE11 0 . . . 1.57 69.03 21 4.9 No 63 -5.21 No 0 0 No -20 0.94 Yes 45 31.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94167376 - NM_005591 MRE11 0 . . . 5.77 62.67 18 5.39 No 75 -2.72 No 0 0 No -17 0.59 No 44 95.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131935811 + NM_005732 RAD50 0 . . . 4.62 67.63 23 7.28 Yes 34 1.01 Yes 0 0 No -22 0.83 Yes 38 77.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47746805 + NM_000251 MSH2 0 . . . 5.23 81.06 25 4.82 No 8 1.61 Yes 0 0 No -29 0.65 No 50 65.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56785987 + NM_058216 RAD51C 0 . . . 1.09 0 14 4.47 No 62 0.64 No 0 0 No -31 0.92 Yes 50 65.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90948285 - NM_002485 NBN 0 . . . 2.49 76.83 29 5.57 Yes 13 0.74 No 0 0 No -28 0.66 No 45 92.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68561952 + NM_133509 RAD51B 0 . . . 5.47 78.69 20 5.48 No 23 0.22 No 0 0 No -23 0.54 No 44 93.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68530127 + NM_133509 RAD51B 0 . . . 6.57 82.93 40 6.58 Yes 32 0.33 No 0 0 No -33 0.4 No 43 93.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68387951 + NM_133509 RAD51B 0 . . . 1.5 0 27 6.12 Yes 72 0.8 Yes 0 0 No -26 0.74 Yes 41 54.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94155310 - NM_005591 MRE11 0 . . . 2.28 75.76 39 6.48 Yes 32 0.79 Yes 0 0 No -36 0.46 No 26 80.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32908149 + NM_000059 BRCA2 0 . . . 5.27 91.83 37 6.4 Yes 53 0.71 No 0 0 No -36 0.78 Yes 47 66.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68951119 + NM_133509 RAD51B 0 . . . 4.46 84.17 17 3.89 No 58 0.33 No 0 0 No -25 0.22 No 11 62.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47638950 + NM_000251 MSH2 0 . . . 3.89 65.63 31 5.22 No 2 0.51 No 0 0 No -30 0.89 Yes 47 83.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47800221 + NM_000251 MSH2 0 . . . 6.1 68.22 34 5.92 Yes 63 0.44 No 0 0 No -28 0.55 No 46 81.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47641557 + NM_000251 MSH2 0 . . . 7.17 92.82 25 3.99 No -1 1.62 Yes 0 0 No -24 0.91 Yes 45 67.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94227414 - NM_005591 MRE11 0 . . . 5.73 77.38 35 6.4 Yes 71 -3.97 No 0 0 No -34 0.71 Yes 48 67.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68568765 + NM_133509 RAD51B 0 . . . 2.31 73.38 13 7.48 Yes NA NA NA 0 0 No -49 0.43 No 44 43.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90977264 - NM_002485 NBN 0 . . . 0.28 67.26 19 4.38 No 10 0.43 No 0 0 No -18 0.93 Yes 48 77.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47715345 + NM_000251 MSH2 0 . . . 7.82 79.19 16 4.52 No 8 0.27 No 0 0 No -20 0.44 No 42 44.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59803553 - NM_032043 BRIP1 0 . . . 5.63 84.9 38 6.24 Yes 3 1.22 Yes 0 0 No -30 0.4 No 49 85.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32968091 + NM_000059 BRCA2 0 . . . 8.13 77.13 27 5.39 No 26 2.05 Yes 0 0 No -26 0.92 Yes 32 93.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21988194 - NM_000077 CDKN2A 0 . . . 2.14 65.1 20 4.9 No 45 0.84 Yes 0 0 No -19 0.89 Yes 45 55.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37067818 + NM_000249 MLH1 0 . . . 5.8 85.23 19 4.36 No 73 -4.89 No 0 0 No -22 0.68 Yes 49 75.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68915413 + NM_133509 RAD51B 0 . . . 1.26 0 22 4.99 No 51 0.07 No 0 0 No -21 0.39 No 47 91.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41239434 - NM_007294 BRCA1 0 . . . 2.41 68.34 12 4.35 No 13 0.8 Yes 0 0 No -24 0.46 No 45 73.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108129586 + NM_000051 ATM 0 . . . 1.74 81.33 22 5 No 18 0.2 No 0 0 No -21 0.8 Yes 46 69.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131913446 + NM_005732 RAD50 0 . . . 5.52 76.07 24 5.19 No 43 0.88 Yes 0 0 No -23 0.7 Yes 42 97.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68773781 + NM_004360 CDH1 0 . . . 4.78 70.83 29 5.91 Yes 23 1.57 Yes 0 0 No -29 0.78 Yes 45 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89653671 + NM_000314 PTEN 0 . . . 6.83 91.76 44 7.37 Yes 8 1.77 Yes 0 0 No -43 0.61 No 46 80.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152363428 - NM_005431 XRCC2 0 . . . 1.47 74.55 19 4.69 No 30 -2.85 No 0 0 No -19 0.54 No 52 60.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131898135 + NM_005732 RAD50 0 . . . 1.24 72.27 16 5.01 No 61 -4.21 No 0 0 No -20 0.76 Yes 50 66.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68720483 + NM_133509 RAD51B 0 . . . 8.81 80.83 33 5.94 Yes 32 1.81 Yes 0 0 No -32 0.45 No 46 73.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68398483 + NM_133509 RAD51B 0 . . . 3.49 70.85 27 5.08 No 23 0.87 Yes 0 0 No -26 0.9 Yes 45 73.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48016561 + NM_000179 MSH6 0 . . . 6.15 84.05 30 5.48 No 68 1.28 Yes 0 0 No -29 0.47 No 49 93.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47628779 + NM_000251 MSH2 0 . . . 1.83 0 24 5.02 No 13 1.1 Yes 0 0 No -23 0.75 Yes 42 64.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68875839 + NM_133509 RAD51B 0 . . . 1.16 71.9 20 5.81 Yes 7 0.94 Yes 0 0 No -19 0.81 Yes 44 67.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69124320 + NM_133509 RAD51B 0 . . . 7.24 82.97 28 5.38 No 27 0.86 Yes 0 0 No -27 0.49 No 42 46.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68619672 + NM_133509 RAD51B 0 . . . 4.95 71.92 23 4.87 No 54 0.53 No 0 0 No -32 0.79 Yes 48 75.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32900176 + NM_000059 BRCA2 0 . . . 0.44 64.81 25 6.08 Yes 62 -4.69 No 0 0 No -24 0.84 Yes 44 44.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68862215 + NM_133509 RAD51B 0 . . . 1.7 78.89 15 4.58 No 61 -4.26 No 0 0 No -43 0.7 Yes 50 67.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215649816 - NM_000465 BARD1 0 . . . 0.71 59.97 30 5.07 No 70 -6.48 No 0 0 No -25 0.48 No 44 20.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41253097 - NM_007294 BRCA1 0 . . . 4.46 74.12 29 5.48 No -1 0.99 Yes 0 0 No -28 0.94 Yes 43 41.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68304044 + NM_133509 RAD51B 0 . . . 3.4 70.22 30 5.66 Yes 57 0.8 Yes 0 0 No -19 0.59 No 42 67.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68858135 + NM_004360 CDH1 0 . . . 5.49 80.23 34 6.6 Yes 57 0.99 Yes 0 0 No -22 0.4 No 17 38.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56772663 + NM_058216 RAD51C 0 . . . 8.22 76.79 13 5.1 No 66 -2.32 No 0 0 No -25 0.63 No 49 38.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47651606 + NM_000251 MSH2 0 . . . 5.85 82.31 34 5.88 Yes 58 1.15 Yes 0 0 No -23 0.54 No 52 83.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29112316 - NM_001005735 CHEK2 0 . . . 0.44 74.68 21 5.2 No 53 0.64 No 0 0 No -20 0.59 No 50 91.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89664198 + NM_000314 PTEN 0 . . . 5.09 84.06 20 5.49 No 19 0.49 No 0 0 No -25 0.9 Yes 43 88.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68755854 + NM_133509 RAD51B 0 . . . 3.12 79.12 32 5.98 Yes 8 0.2 No 0 0 No -31 0.52 No 50 80.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108157397 + NM_000051 ATM 0 . . . 1.4 80.52 24 5.01 No 52 -1.96 No 0 0 No -23 0.73 Yes 44 69.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69093849 + NM_133509 RAD51B 0 . . . 4.19 73.2 16 4.69 No -3 0.79 Yes 0 0 No -20 0.74 Yes 50 86.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131938596 + NM_005732 RAD50 0 . . . 1.99 65.02 15 5.1 No 40 1.06 Yes 0 0 No -21 0.75 Yes 47 69.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68364437 + NM_133509 RAD51B 0 . . . 0.4 72.02 18 5.32 No 59 1.16 Yes 0 0 No -22 0.52 No 49 39.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41196406 - NM_007294 BRCA1 0 . . . 2.06 0 18 4.64 No 50 0.38 No 0 0 No -27 0.55 No 45 35.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32957013 + NM_000059 BRCA2 0 . . . 3.17 65.58 22 4.59 No 70 -5.24 No 0 0 No -36 0.81 Yes 45 94.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69127340 + NM_133509 RAD51B 0 . . . 10.18 86.36 45 7.08 Yes 61 -3.4 No 0 0 No -24 0.51 No 46 51.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108236492 + NM_000051 ATM 0 . . . 0.09 74.68 25 5.54 No 4 0.41 No 0 0 No -22 0.67 Yes 54 81.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108138694 + NM_000051 ATM 0 . . . 9.73 86.01 14 5.19 No 28 1.68 Yes 0 0 No -27 0.52 No 45 67.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41275342 - NM_007294 BRCA1 0 . . . 1.37 68.61 24 5.61 Yes 49 0.91 Yes 0 0 No -24 0.45 No 46 35.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68372038 + NM_133509 RAD51B 0 . . . 4.78 77.46 59 7.62 Yes 50 2.41 Yes 0 0 No -28 0.71 Yes 49 75.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47659600 + NM_000251 MSH2 0 . . . 8.23 84.92 28 5.38 No 57 2.45 Yes 0 0 No -55 0.74 Yes 46 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75481606 - NM_001040108 MLH3 0 . . . 2.86 78.44 31 4.59 No 3 0.28 No 0 0 No -24 0.59 No 55 48.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68853012 + NM_004360 CDH1 0 . . . 1.14 80.37 33 6.17 Yes 13 1.71 Yes 0 0 No -32 0.92 Yes 45 82.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7568366 - NM_000546 TP53 0 . . . 3.12 70.25 25 5.57 Yes 71 -5.47 No 0 0 No -24 0.8 Yes 44 52.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108209939 + NM_000051 ATM 0 . . . 0.37 65.19 14 3.65 No 47 0.5 No 0 0 No -20 0.82 Yes 45 46.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68535872 + NM_133509 RAD51B 0 . . . 9.35 89.91 43 6.8 Yes 12 0.83 Yes 0 0 No -36 0.27 No 46 95.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1212585 + NM_000455 STK11 0 . . . 1.09 83.14 19 4.47 No 19 1.85 Yes 0 0 No -18 0.9 Yes 39 63.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69089292 + NM_133509 RAD51B 0 . . . 8.69 84.53 23 5.67 Yes 4 1.53 Yes 0 0 No -22 0.54 No 41 82.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69046147 + NM_133509 RAD51B 0 . . . 1.37 73.29 22 3.79 No 6 1.22 Yes 0 0 No -21 0.9 Yes 46 56.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94159988 - NM_005591 MRE11 0 . . . 0.69 71.57 17 5.29 No 28 0.63 No 0 0 No -21 0.57 No 30 77.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94201843 - NM_005591 MRE11 0 . . . 5.68 88.88 28 5.27 No 44 -1.7 No 0 0 No -21 0.59 No 40 74.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47687070 + NM_000251 MSH2 0 . . . 7.04 75.66 52 6.69 Yes 45 2.67 Yes 0 0 No -23 0.65 No 35 70.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108130842 + NM_000051 ATM 0 . . . 5.32 79.06 72 6.07 Yes 14 -1.67 No 0 0 No -36 0.37 No 44 85.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68356027 + NM_133509 RAD51B 0 . . . 5.22 84.06 11 4.12 No 10 -2.28 No 0 0 No -27 0.94 Yes 44 79.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68879577 + NM_133509 RAD51B 0 . . . 0.94 0 10 4.12 No 66 -5.99 No 0 0 No -36 0.83 Yes 48 68.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41251334 - NM_007294 BRCA1 0 . . . 1.43 80.22 12 4.24 No 58 -3.88 No 0 0 No -21 0.64 No 43 41.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47677342 + NM_000251 MSH2 0 . . . 3.02 73.95 17 5.29 No 56 0.99 Yes 0 0 No -21 0.64 No 49 68.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32917321 + NM_000059 BRCA2 0 . . . 5.13 72.04 27 5.29 No 76 0.04 No 0 0 No -26 0.44 No 48 86.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47683657 + NM_000251 MSH2 0 . . . 2.41 69.32 21 4.37 No 10 1.12 Yes 0 0 No -25 0.48 No 48 77.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47655331 + NM_000251 MSH2 0 . . . 5.13 73.13 35 6.04 Yes 17 1.13 Yes 0 0 No -34 0.75 Yes 41 90.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41227431 - NM_007294 BRCA1 0 . . . 0.24 75.73 24 5.83 Yes 53 0.83 Yes 0 0 No -23 0.9 Yes 48 50.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68671234 + NM_133509 RAD51B 0 . . . 3.08 69.73 41 10.1 Yes 75 -6.53 No 0 0 No -40 0.87 Yes 48 45.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23650756 - NM_024675 PALB2 0 . . . 3.02 66.99 27 5.2 No 70 -0.35 No 0 0 No -30 0.33 No 48 70.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59872143 - NM_032043 BRIP1 0 . . . 0.18 62.85 28 5.22 No 74 1.29 Yes 0 0 No -27 0.56 No 55 56.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68614571 + NM_133509 RAD51B 0 . . . 2.31 66.85 25 5.29 No 3 0.29 No 0 0 No -24 0.88 Yes 40 43.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84384878 - NM_139076 FAM175A 0 . . . 0.97 70.89 23 4.79 No 45 0.69 No 0 0 No -22 0.78 Yes 50 22.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41229650 - NM_007294 BRCA1 0 . . . 1.16 51.9 32 5.56 Yes 59 0.36 No 0 0 No -18 0.39 No 44 31.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7592708 - NM_000546 TP53 0 . . . 6.81 75.87 28 5.38 No 36 0.25 No 0 0 No -27 0.68 Yes 46 66.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59921642 - NM_032043 BRIP1 0 . . . 2.72 78.4 31 5.74 Yes 71 1.06 Yes 0 0 No -30 0.95 Yes 40 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47647920 + NM_000251 MSH2 0 . . . 3.99 82.14 32 8.02 Yes 57 0.76 No 0 0 No -31 0.7 Yes 53 70.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68837148 + NM_004360 CDH1 0 . . . 6.14 64.8 32 6.12 Yes 11 1.03 Yes 0 0 No -31 0.76 Yes 47 69.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56800461 + NM_058216 RAD51C 0 . . . 7.19 68.45 27 6.71 Yes 21 0.85 Yes 0 0 No -24 0.63 No 42 67.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32926339 + NM_000059 BRCA2 0 . . . 1.55 64.02 23 8.12 Yes 40 0.74 No 0 0 No -23 0.41 No 44 40.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1216074 + NM_000455 STK11 0 . . . 4.16 72.51 19 4.61 No 44 1.08 Yes 0 0 No -23 0.55 No 42 59.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84384221 - NM_139076 FAM175A 0 . . . 6.49 78.57 27 5.1 No 21 0.93 Yes 0 0 No -26 0.85 Yes 49 50.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89662763 + NM_000314 PTEN 0 . . . 5.97 75.34 35 5.79 Yes -4 0.96 Yes 0 0 No -27 0.82 Yes 39 63.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190646952 + NM_000534 PMS1 0 . . . 2.39 78.62 24 6.16 Yes 43 1.7 Yes 0 0 No -23 0.83 Yes 54 42.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59757704 - NM_032043 BRIP1 0 . . . 1.98 0 15 5.2 No 58 0.35 No 0 0 No -51 0.47 No 35 49.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190726659 + NM_000534 PMS1 0 . . . 5.47 69.06 17 5.47 No 9 0.9 Yes 0 0 No -21 0.42 No 44 67.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94155751 - NM_005591 MRE11 0 . . . 2.72 76.47 25 6.4 Yes 0 0.15 No 0 0 No -24 0.94 Yes 42 67.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59907723 - NM_032043 BRIP1 0 . . . 3.73 66.21 33 6.67 Yes 1 0.88 Yes 0 0 No -24 0.64 No 44 84.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68714367 + NM_133509 RAD51B 0 . . . 1.5 67.84 13 4.88 No 29 1.25 Yes 0 0 No -22 0.5 No 29 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131901588 + NM_005732 RAD50 0 . . . 1.18 69.16 20 4.57 No 75 0.9 Yes 0 0 No -23 0.8 Yes 39 82.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68547553 + NM_133509 RAD51B 0 . . . 3.86 71.2 19 4.27 No 70 0.23 No 0 0 No -25 0.56 No 45 80.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68847419 + NM_004360 CDH1 0 . . . 0.2 62.23 34 6.3 Yes 74 0.11 No 0 0 No -30 0.72 Yes 42 44.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68679708 + NM_133509 RAD51B 0 . . . 3.88 74.85 13 5 No 53 0.65 No 0 0 No -24 0.41 No 40 71.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41267355 - NM_007294 BRCA1 0 . . . 3.48 84.24 28 6.18 Yes 4 1.19 Yes 0 0 No -27 0.61 No 43 55.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190722885 + NM_000534 PMS1 0 . . . 4.65 69.58 17 5.29 No 0 1.57 Yes 0 0 No -25 0.81 Yes 54 54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41246949 - NM_007294 BRCA1 0 . . . 3.54 80.36 20 5.1 No 3 0.53 No 0 0 No -23 0.54 No 38 69.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94156687 - NM_005591 MRE11 0 . . . 1.84 0 16 5.56 Yes NA NA NA 0 0 No -16 0.48 No 61 28.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108205179 + NM_000051 ATM 0 . . . 1 81.27 20 3.18 No 6 1.3 Yes 0 0 No -23 0.36 No 40 87.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75487846 - NM_001040108 MLH3 0 . . . 0.87 74.68 27 4.78 No 60 0.66 No 0 0 No -26 0.33 No 54 81.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29087413 - NM_001005735 CHEK2 0 . . . 1.42 74.02 31 6.88 Yes 69 0.04 No 0 0 No -30 0.68 Yes 17 57.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68472104 + NM_133509 RAD51B 0 . . . 5.19 73.55 17 5.29 No 11 0.15 No 0 0 No -21 0.57 No 44 84.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69027643 + NM_133509 RAD51B 0 . . . 4.32 76.66 34 5.83 Yes 26 1.54 Yes 0 0 No -33 0.85 Yes 46 55.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190728321 + NM_000534 PMS1 0 . . . 3.58 0 25 5.06 No 23 0.78 Yes 0 0 No -21 0.39 No 39 56.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47640829 + NM_000251 MSH2 0 . . . 4.01 72.93 26 5.52 No 29 0.3 No 0 0 No -25 0.72 Yes 46 53.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68332217 + NM_133509 RAD51B 0 . . . 2.95 70.85 18 4.73 No 13 0.78 Yes 0 0 No -25 0.35 No 45 79.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47777868 + NM_000251 MSH2 0 . . . 0.71 65.66 28 6 Yes 21 -3.17 No 0 0 No -32 0.46 No 49 35.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94181830 - NM_005591 MRE11 0 . . . 0.42 0 27 5.57 Yes 14 0.73 No 0 0 No -24 0.78 Yes 44 77.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68559008 + NM_133509 RAD51B 0 . . . 1.28 74.35 16 4.41 No 70 0.29 No 0 0 No -40 0.62 No 47 64.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56769691 + NM_058216 RAD51C 0 . . . 5.74 86.1 16 4.77 No 42 1.52 Yes 0 0 No -27 0.48 No 48 53.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32943066 + NM_000059 BRCA2 0 . . . 0.4 84.22 18 4.88 No 33 1.11 Yes 0 0 No -24 0.32 No 25 67.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94226864 - NM_005591 MRE11 0 . . . 0.76 62.36 24 4.7 No 52 0.67 No 0 0 No -23 0.8 Yes 30 36.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105176121 + NM_021930 RINT1 0 . . . 1.16 80.65 10 4.03 No 36 1.13 Yes 0 0 No -22 0.72 Yes 50 63.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59874729 - NM_032043 BRIP1 0 . . . 2.86 67.75 41 6.39 Yes 5 0.86 Yes 0 0 No -34 0.55 No 50 69.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68680767 + NM_133509 RAD51B 0 . . . 4.55 72.17 26 5.32 No 6 0.02 No 0 0 No -25 0.94 Yes 52 50.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68312478 + NM_133509 RAD51B 0 . . . 7.29 83.57 16 4.47 No 13 0.19 No 0 0 No -31 0.62 No 50 57.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29135432 - NM_001005735 CHEK2 0 . . . 5.02 68.34 26 4.84 No 23 1.65 Yes 0 0 No -25 0.77 Yes 45 83.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29098666 - NM_001005735 CHEK2 0 . . . 1.74 80.83 19 5.14 No 53 0.27 No 0 0 No -26 0.78 Yes 36 50.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68597778 + NM_133509 RAD51B 0 . . . 5.81 77.52 36 5.63 Yes -1 0.32 No 0 0 No -35 0.6 No 43 44.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21975178 - NM_000077 CDKN2A 0 . . . 2.96 65.84 29 6.17 Yes 60 0.64 No 0 0 No -23 0.73 Yes 51 30.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94150274 - NM_005591 MRE11 0 . . . 3.29 67.3 56 6.53 Yes 54 0.64 No 0 0 No -28 0.48 No 36 70.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1216037 + NM_000455 STK11 0 . . . 6.04 75.99 20 5.1 No 61 1.51 Yes 0 0 No -19 0.83 Yes 51 64.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68507477 + NM_133509 RAD51B 0 . . . 5.2 84.72 23 5.74 Yes 6 0.13 No 0 0 No -22 0.84 Yes 49 62.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69090426 + NM_133509 RAD51B 0 . . . 1.34 0 18 4.69 No 21 0.31 No 0 0 No -53 0.45 No 34 39.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59910746 - NM_032043 BRIP1 0 . . . 1.91 73.67 31 5.54 No 52 0.74 No 0 0 No -30 0.57 No 43 66.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68426337 + NM_133509 RAD51B 0 . . . 0.82 65.74 31 6.08 Yes -3 0.71 No 0 0 No -30 0.91 Yes 61 25.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68709171 + NM_133509 RAD51B 0 . . . 3.97 82.06 21 7.12 Yes 59 1.85 Yes 0 0 No -20 0.56 No 51 51.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68619764 + NM_133509 RAD51B 0 . . . 3.46 64.45 54 6.92 Yes 15 0.82 Yes 0 0 No -46 0.82 Yes 43 87.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68394077 + NM_133509 RAD51B 0 . . . 6.24 78.02 33 4.97 No 58 0.42 No 0 0 No -23 0.75 Yes 30 58.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68999662 + NM_133509 RAD51B 0 . . . 0.22 68.84 29 4.43 No -1 0.16 No 0 0 No -28 0.93 Yes 59 81.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69142555 + NM_133509 RAD51B 0 . . . 1.27 0 13 4.79 No 23 1.79 Yes 0 0 No -20 0.61 No 35 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69066060 + NM_133509 RAD51B 0 . . . 5.63 86.26 16 4.77 No 33 1.11 Yes 0 0 No -30 0.33 No 52 56.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68875364 + NM_133509 RAD51B 0 . . . 3.77 79.84 22 5.29 No 50 0.09 No 0 0 No -21 0.92 Yes 46 48.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29094726 - NM_001005735 CHEK2 0 . . . 2.14 83.23 20 4.11 No 55 -0.41 No 0 0 No -19 0.87 Yes 50 77.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68775536 + NM_004360 CDH1 0 . . . 0.25 0 22 5.2 No 41 1.81 Yes 0 0 No -21 0.53 No 42 79.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48035204 + NM_000179 MSH6 0 . . . 2.43 69.44 31 5.65 Yes 62 2.07 Yes 0 0 No -52 0.7 Yes 46 51.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190703157 + NM_000534 PMS1 0 . . . 3.16 80.79 44 6.13 Yes 57 1.09 Yes 0 0 No -36 0.7 Yes 39 86.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94175412 - NM_005591 MRE11 0 . . . 2.23 65.91 25 5.77 Yes 51 1.69 Yes 0 0 No -32 0.74 Yes 22 63.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41278809 - NM_007294 BRCA1 0 . . . 3.28 73.95 19 5.6 Yes NA NA NA 0 0 No -18 0.8 Yes 48 20.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32910270 + NM_000059 BRCA2 0 . . . 0.89 84.71 18 5.48 No 74 1.06 Yes 0 0 No -23 0.75 Yes 50 91.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90961354 - NM_002485 NBN 0 . . . 4.47 76.13 30 6.79 Yes 28 2.01 Yes 0 0 No -25 0.73 Yes 45 65.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40995768 + NM_001164269 RAD51 0 . . . 2.42 80.34 60 4.28 No 58 0.79 Yes 0 0 No -27 0.67 Yes 45 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7590628 - NM_000546 TP53 0 . . . 7.58 82.16 18 4.13 No 74 1.57 Yes 0 0 No -17 0.85 Yes 42 79.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41001198 + NM_001164269 RAD51 0 . . . 1.83 69.94 17 6.56 Yes 45 0.51 No 26 0.9 Yes -16 0.56 No 42 67.32 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 69060673 + NM_133509 RAD51B 0 . . . 4.27 85.56 33 6.09 Yes 68 0.75 No 0 0 No -29 0.56 No 45 91.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47802731 + NM_000251 MSH2 0 . . . 4.42 76.62 22 6.5 Yes 43 1.27 Yes 0 0 No -26 0.6 No 15 76.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108212897 + NM_000051 ATM 0 . . . 0.76 76.54 14 5.89 Yes 15 -2.61 No 0 0 No -32 0.66 No 33 63.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68383281 + NM_133509 RAD51B 0 . . . 6.55 87 16 4.9 No 13 1.51 Yes 0 0 No -19 0.57 No 45 90.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94191886 - NM_005591 MRE11 0 . . . 2.22 71.67 22 5.85 Yes 18 0.27 No 0 0 No -21 0.71 Yes 40 82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68698453 + NM_133509 RAD51B 0 . . . 2.66 75.76 14 4.47 No 38 -2.59 No 0 0 No -33 0.83 Yes 43 47.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190656530 + NM_000534 PMS1 0 . . . 2.99 71.02 13 5.48 No 27 0.28 No 29 0.33 Yes -59 0.59 No 31 96.79 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 68583329 + NM_133509 RAD51B 0 . . . 3.23 67.57 9 4.69 No 34 -2.51 No 0 0 No -39 0.43 No 38 65.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68332138 + NM_133509 RAD51B 0 . . . 1.89 83.01 29 4.09 No 7 1.04 Yes 0 0 No -28 0.65 No 51 79.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59764072 - NM_032043 BRIP1 0 . . . 1.72 69.1 18 5.86 Yes 33 -3.95 No 0 0 No -30 0.77 Yes 38 58.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108166821 + NM_000051 ATM 0 . . . 4.7 78.07 29 5.92 Yes 22 0.09 No 0 0 No -25 0.66 No 48 55.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59933692 - NM_032043 BRIP1 0 . . . 0.59 0 28 5.29 No 38 1.97 Yes 0 0 No -51 0.38 No 20 69.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105207058 + NM_021930 RINT1 0 . . . 0.56 0 36 5.46 No 8 0.23 No 0 0 No -28 0.7 Yes 47 50.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108234041 + NM_000051 ATM 0 . . . 4.27 0 23 5.2 No 18 1.4 Yes 0 0 No -20 0.61 No 28 48.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68704968 + NM_133509 RAD51B 0 . . . 2.99 75.66 19 5 No 50 -3.27 No 0 0 No -18 0.66 No 41 61.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47787821 + NM_000251 MSH2 0 . . . 8.57 84.69 30 5.9 Yes 74 1.67 Yes 0 0 No -29 0.38 No 51 47.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68778520 + NM_004360 CDH1 0 . . . 3.09 73.14 19 5.9 Yes 19 1.48 Yes 0 0 No -18 0.68 Yes 17 78.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68820758 + NM_004360 CDH1 0 . . . 4.93 80.39 23 5.27 No -3 0.47 No 0 0 No -25 0.46 No 36 74.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47743240 + NM_000251 MSH2 0 . . . 2.77 69.29 13 5.69 Yes -4 0.4 No 0 0 No -21 0.21 No 58 26.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68456896 + NM_133509 RAD51B 0 . . . 1.65 73.28 39 6.13 Yes 4 0.73 No 0 0 No -38 0.46 No 46 65.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68782283 + NM_133509 RAD51B 0 . . . 3.9 83.72 23 4.85 No 2 1.5 Yes 0 0 No -22 0.61 No 16 62.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68550702 + NM_133509 RAD51B 0 . . . 6.97 78.53 18 4.8 No 64 -3.87 No 0 0 No -34 0.77 Yes 40 34.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90960282 - NM_002485 NBN 0 . . . 0.79 79.61 32 5.49 No 43 0.95 Yes 0 0 No -24 0.94 Yes 47 65.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41235804 - NM_007294 BRCA1 0 . . . 1.99 62.89 28 4.76 No 19 0.65 No 0 0 No -27 0.82 Yes 30 81.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32934026 + NM_000059 BRCA2 0 . . . 1.85 71.9 28 5.83 Yes 48 0.23 No 0 0 No -35 0.63 No 42 53.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68787595 + NM_133509 RAD51B 0 . . . 4.06 70.23 15 4.38 No 60 -2.09 No 0 0 No -24 0.73 Yes 46 91.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94212567 - NM_005591 MRE11 0 . . . 1.66 67.47 25 6.22 Yes 0 0.36 No 0 0 No -24 0.76 Yes 51 47.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47662059 + NM_000251 MSH2 0 . . . 2.39 70.6 44 8.55 Yes 74 1.59 Yes 0 0 No -29 0.53 No 48 59.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68387373 + NM_133509 RAD51B 0 . . . 4.74 78.18 18 4.9 No 40 0.63 No 0 0 No -51 0.35 No 44 72.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41208163 - NM_007294 BRCA1 0 . . . 1.52 71.29 11 7.28 Yes 8 -2.1 No 0 0 No -46 0.51 No 50 35.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94203924 - NM_005591 MRE11 0 . . . 3.46 81.53 17 6.76 Yes 75 0.32 No 0 0 No -29 0.56 No 48 49.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68306082 + NM_133509 RAD51B 0 . . . 4.68 80.38 43 7.29 Yes 49 1.13 Yes 0 0 No -42 0.49 No 43 52.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190713505 + NM_000534 PMS1 0 . . . 5.37 71.91 37 7.24 Yes 26 1.64 Yes 0 0 No -23 0.27 No 32 95.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68829115 + NM_133509 RAD51B 0 . . . 4.08 73.34 16 5.51 No 64 1.08 Yes 0 0 No -24 0.46 No 45 85.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94175577 - NM_005591 MRE11 0 . . . 4.73 85.46 27 5.1 No 6 0.77 No 0 0 No -20 0.43 No 46 79.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90964083 - NM_002485 NBN 0 . . . 1.98 70.92 19 6.22 Yes 65 0.14 No 0 0 No -29 0.61 No 41 76.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32942275 + NM_000059 BRCA2 0 . . . 1.08 84.22 14 4.47 No 33 1.14 Yes 0 0 No -33 0.67 Yes 50 52.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215643615 - NM_000465 BARD1 0 . . . 1.15 86.75 14 6.08 Yes 68 0.91 Yes 0 0 No -31 0.69 Yes 33 64.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215607504 - NM_000465 BARD1 0 . . . 0.62 0 22 5.29 No 18 0.48 No 0 0 No -21 0.85 Yes 40 57.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190723811 + NM_000534 PMS1 0 . . . 3.63 78.49 25 5.1 No 3 1.48 Yes 0 0 No -24 0.78 Yes 48 46.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108234633 + NM_000051 ATM 0 . . . 7.02 78.92 36 5.86 Yes 3 0.62 No 0 0 No -25 0.58 No 42 71.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89673752 + NM_000314 PTEN 0 . . . 8.12 80.37 30 5.74 Yes 11 1.01 Yes 0 0 No -27 0.89 Yes 47 72.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41206503 - NM_007294 BRCA1 0 . . . 2.28 79.13 27 5.74 Yes 67 -4.96 No 0 0 No -26 0.53 No 50 50.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68714863 + NM_133509 RAD51B 0 . . . 1.03 62.36 18 5.19 No 45 0.94 Yes 0 0 No -44 0.66 No 45 91.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152364382 - NM_005431 XRCC2 0 . . . 0.1 0 19 5 No 40 1.4 Yes 0 0 No -18 0.75 Yes 41 82.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94149580 - NM_005591 MRE11 0 . . . 8.94 83.24 33 5.69 Yes 53 0.45 No 0 0 No -23 0.56 No 42 89.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59793193 - NM_032043 BRIP1 0 . . . 2.83 63.21 22 4.19 No 13 0.47 No 0 0 No -21 0.41 No 33 31.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41267639 - NM_007294 BRCA1 0 . . . 4.26 77.41 21 4.74 No 20 0.86 Yes 0 0 No -26 0.59 No 43 88.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47749828 + NM_000251 MSH2 0 . . . 1.14 76.38 17 4.42 No 38 0.65 No 0 0 No -23 0.31 No 16 50.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94184598 - NM_005591 MRE11 0 . . . 1.65 61.97 34 7.73 Yes 63 -2.67 No 0 0 No -33 0.67 Yes 32 73.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84396609 - NM_139076 FAM175A 0 . . . 4.23 64.56 32 5.77 Yes 17 0.42 No 0 0 No -32 0.77 Yes 41 28.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69070013 + NM_133509 RAD51B 0 . . . 1.99 63.81 33 5.1 No 76 0.63 No 0 0 No -32 0.67 Yes 51 82.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68631220 + NM_133509 RAD51B 0 . . . 2.34 69.76 34 5.69 Yes 62 -4.83 No 0 0 No -33 0.81 Yes 46 65.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75516998 - NM_001040108 MLH3 0 . . . 7.75 85.17 26 5.52 No 67 -2.64 No 0 0 No -25 0.5 No 29 43.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131892506 + NM_005732 RAD50 0 . . . 3.13 78.45 9 3.87 No 45 0.51 No 0 0 No -36 0.68 Yes 13 40.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68588783 + NM_133509 RAD51B 0 . . . 1.44 75.64 17 6.86 Yes 34 0.59 No 0 0 No -36 0.71 Yes 50 63.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68750342 + NM_133509 RAD51B 0 . . . 0.78 66.33 18 5.07 No 44 -4.64 No 0 0 No -37 0.64 No 42 81.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68509139 + NM_133509 RAD51B 0 . . . 1.11 72.39 22 5.57 Yes 23 0.15 No 0 0 No -32 0.51 No 47 63.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215644468 - NM_000465 BARD1 0 . . . 1.07 80.11 25 5.1 No 42 0.23 No 0 0 No -24 0.6 No 51 67.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32954772 + NM_000059 BRCA2 0 . . . 4.83 90.8 36 5.92 Yes 52 1.47 Yes 0 0 No -35 0.61 No 49 58.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59882216 - NM_032043 BRIP1 0 . . . 5.43 92.6 30 5.07 No 8 0.78 Yes 0 0 No -21 0.52 No 42 79.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108122504 + NM_000051 ATM 0 . . . 4.31 73.38 31 6.48 Yes 50 0.8 Yes 0 0 No -30 0.58 No 31 65.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90946193 - NM_002485 NBN 0 . . . 1.75 74.55 12 4.24 No 48 -2.14 No 0 0 No -27 0.97 Yes 50 85.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41016898 + NM_001164269 RAD51 0 . . . 2.3 84.41 41 6.23 Yes 27 1.77 Yes 0 0 No -24 0.29 No 31 94.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131921549 + NM_005732 RAD50 0 . . . 0.42 0 23 4.52 No 10 0.32 No 0 0 No -22 0.5 No 48 44.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131911035 + NM_005732 RAD50 0 . . . 1.2 68.62 74 8.17 Yes 3 0.92 Yes 0 0 No -24 0.94 Yes 55 56.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68402212 + NM_133509 RAD51B 0 . . . 1.45 0 21 5.61 Yes 45 0.99 Yes 0 0 No -23 0.57 No 18 54.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215666448 - NM_000465 BARD1 0 . . . 2.51 70.21 31 6.62 Yes 52 0.68 No 0 0 No -31 0.81 Yes 43 82.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94189317 - NM_005591 MRE11 0 . . . 2.22 65.71 28 6.08 Yes 68 -5.16 No 0 0 No -27 0.79 Yes 53 56.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68847432 + NM_133509 RAD51B 0 . . . 2.94 0 19 5.07 No 31 0.08 No 0 0 No -26 0.54 No 52 51.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47791421 + NM_000251 MSH2 0 . . . 5.9 78.02 16 4.69 No 73 -4.69 No 0 0 No -23 0.7 Yes 51 58.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108117424 + NM_000051 ATM 0 . . . 6.91 89.3 13 4.12 No 74 0.8 Yes 0 0 No -28 0.67 Yes 48 56.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59761982 - NM_032043 BRIP1 0 . . . 2.82 73.54 22 5.29 No 74 0.58 No 0 0 No -21 0.55 No 47 54.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32966860 + NM_000059 BRCA2 0 . . . 3.17 66.31 15 4.43 No 28 1.69 Yes 0 0 No -57 0.34 No 45 80.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69076419 + NM_133509 RAD51B 0 . . . 2.97 84.93 17 4.8 No 19 -0.23 No 0 0 No -23 0.64 No 53 58.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68900422 + NM_133509 RAD51B 0 . . . 6.92 78.78 24 4.8 No 43 1.52 Yes 0 0 No -23 0.77 Yes 46 62.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69148463 + NM_133509 RAD51B 0 . . . 6.56 79.71 32 6.16 Yes 11 1.53 Yes 0 0 No -31 0.72 Yes 40 37.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108203885 + NM_000051 ATM 0 . . . 2.86 83.62 30 5.28 No 41 0.87 Yes 0 0 No -29 0.76 Yes 40 35.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41232070 - NM_007294 BRCA1 0 . . . 2.64 79.97 21 5.61 Yes 32 0.22 No 0 0 No -32 0.33 No 49 71.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75491722 - NM_001040108 MLH3 0 . . . 9.35 90.18 21 5.09 No 10 0.42 No 0 0 No -20 0.8 Yes 48 87.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48035288 + NM_000179 MSH6 0 . . . 0.05 0 14 4.47 No 31 -4.18 No 0 0 No -40 0.94 Yes 40 59.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69131220 + NM_133509 RAD51B 0 . . . 5.94 71.64 26 4.07 No 4 0.5 No 0 0 No -25 0.69 Yes 43 81.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68845505 + NM_133509 RAD51B 0 . . . 4.66 74.57 32 5.66 Yes 17 1.31 Yes 0 0 No -31 0.64 No 41 80.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68339014 + NM_133509 RAD51B 0 . . . 2.15 68.08 34 6.16 Yes 71 -3.76 No 0 0 No -33 0.89 Yes 43 50.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68656202 + NM_133509 RAD51B 0 . . . 1.61 0 15 5.39 No 69 0.75 No 0 0 No -28 0.2 No 35 65.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68800380 + NM_133509 RAD51B 0 . . . 5.03 68.28 19 5.63 Yes 19 0.14 No 0 0 No -18 0.63 No 40 77.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23617199 - NM_024675 PALB2 0 . . . 6.64 77.64 25 4.31 No 69 1.04 Yes 0 0 No -25 0.65 No 49 54.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190673883 + NM_000534 PMS1 0 . . . 5.79 73.42 22 5.29 No 13 0.23 No 0 0 No -21 0.74 Yes 45 86.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68341051 + NM_133509 RAD51B 0 . . . 4.59 77.5 17 5.85 Yes 65 0.65 No 0 0 No -20 0.58 No 49 79.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215589131 - NM_000465 BARD1 0 . . . 2.56 72.47 24 5.33 No 48 1.99 Yes 0 0 No -23 0.88 Yes 48 33.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68426904 + NM_133509 RAD51B 0 . . . 1.78 77.01 23 5.2 No 45 -3.49 No 0 0 No -23 0.82 Yes 45 79.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37093051 + NM_000249 MLH1 0 . . . 6.55 80.11 30 5.66 Yes 54 0.67 No 0 0 No -29 0.82 Yes 42 86.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68601282 + NM_133509 RAD51B 0 . . . 5.7 79.86 18 4.9 No 65 0.7 No 0 0 No -17 0.49 No 44 63.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7590378 - NM_000546 TP53 0 . . . 5.45 65.24 26 5.51 No 28 0.82 Yes 0 0 No -25 0.59 No 30 79.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68344683 + NM_133509 RAD51B 0 . . . 1.15 73.61 16 4 No 56 0.59 No 0 0 No -32 0.49 No 51 38.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48027621 + NM_000179 MSH6 0 . . . 4.55 75.21 30 4.06 No 51 -3.55 No 0 0 No -29 0.43 No 37 67.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68963520 + NM_133509 RAD51B 0 . . . 3.26 70.13 86 9.51 Yes 15 0.94 Yes 0 0 No -29 0.87 Yes 43 71.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68988810 + NM_133509 RAD51B 0 . . . 2.7 83.29 25 6.79 Yes 15 0.17 No 0 0 No -24 0.42 No 54 56.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68469468 + NM_133509 RAD51B 0 . . . 1.74 61.57 20 7.07 Yes 44 0.29 No 0 0 No -19 0.6 No 44 56.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59797751 - NM_032043 BRIP1 0 . . . 2.22 0 19 5 No 35 0.27 No 0 0 No -23 0.71 Yes 42 93.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68564908 + NM_133509 RAD51B 0 . . . 2.97 66.86 23 5.92 Yes 69 1.74 Yes 0 0 No -22 0.79 Yes 33 43.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59929959 - NM_032043 BRIP1 0 . . . 0.31 68.07 22 6.81 Yes 45 1.46 Yes 0 0 No -21 0.96 Yes 46 58.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94205673 - NM_005591 MRE11 0 . . . 0.5 70.07 21 5.17 No 14 1.17 Yes 0 0 No -20 0.43 No 44 95.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68793604 + NM_004360 CDH1 0 . . . 1.56 80.15 20 6.93 Yes 34 0.17 No 0 0 No -29 0.63 No 40 57.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190704414 + NM_000534 PMS1 0 . . . 0.29 65.11 44 6.21 Yes 34 1.23 Yes 0 0 No -26 0.86 Yes 24 72.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68845982 + NM_004360 CDH1 0 . . . 3.92 65.18 18 4.59 No 21 0.13 No 22 0.43 Yes -23 0.38 No 37 71.36 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 59863858 - NM_032043 BRIP1 0 . . . 6.55 76.61 42 6.85 Yes 22 0.74 No 0 0 No -40 0.35 No 44 82.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94171193 - NM_005591 MRE11 0 . . . 1.08 84.22 28 6.7 Yes 33 1.14 Yes 0 0 No -27 0.85 Yes 25 42.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32974002 + NM_000059 BRCA2 0 . . . 6.06 79.31 15 4.95 No 73 0.74 No 0 0 No -23 0.44 No 50 64.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59880619 - NM_032043 BRIP1 0 . . . 2.74 69.32 11 3.48 No 22 0.12 No 0 0 No -24 0.38 No 42 36.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23635314 - NM_024675 PALB2 0 . . . 1.14 72.36 33 5.92 Yes 59 0.95 Yes 0 0 No -28 0.18 No 61 45.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68811068 + NM_004360 CDH1 0 . . . 5.51 81.55 17 4.69 No 74 -2.85 No 0 0 No -54 0.56 No 42 89.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68617471 + NM_133509 RAD51B 0 . . . 0.51 0 34 7.47 Yes 10 1.54 Yes 0 0 No -33 0.73 Yes 47 59.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89688592 + NM_000314 PTEN 0 . . . 5.52 72.84 9 5.29 No 52 1.09 Yes 0 0 No -41 0.37 No 33 62.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47747611 + NM_000251 MSH2 0 . . . 1.03 76.69 26 5.64 Yes -4 0.95 Yes 0 0 No -25 0.42 No 47 67.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108177171 + NM_000051 ATM 0 . . . 4.65 80.55 18 4.69 No 68 0.55 No 0 0 No -40 0.39 No 42 45.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7589956 - NM_000546 TP53 0 . . . 3.5 77.81 20 4.9 No 38 0.21 No 0 0 No -19 0.72 Yes 40 65.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152346356 - NM_005431 XRCC2 0 . . . 1.3 65.97 27 5.13 No 27 -3.5 No 0 0 No -26 0.54 No 39 79.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56797657 + NM_058216 RAD51C 0 . . . 1.03 63.56 22 4.53 No 59 1.25 Yes 0 0 No -50 0.47 No 42 63.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69019059 + NM_133509 RAD51B 0 . . . 7.61 85 46 5.33 No 14 -0.83 No 0 0 No -25 0.71 Yes 46 80.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68994187 + NM_133509 RAD51B 0 . . . 8.73 88.09 26 6.08 Yes 17 0.63 No 0 0 No -23 0.71 Yes 41 51.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90984383 - NM_002485 NBN 0 . . . 2.81 77.59 17 5.29 No 5 0.05 No 0 0 No -16 0.46 No 53 61.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68708230 + NM_133509 RAD51B 0 . . . 2.66 76.63 26 4.84 No 58 -3.88 No 0 0 No -35 0.52 No 48 76.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68703142 + NM_133509 RAD51B 0 . . . 4.05 60.83 26 6.39 Yes 10 -1.24 No 0 0 No -24 0.4 No 42 64.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21967161 - NM_000077 CDKN2A 0 . . . 12.34 92.17 34 6.08 Yes 60 0.28 No 0 0 No -24 0.59 No 50 77.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68334065 + NM_133509 RAD51B 0 . . . 1.82 65.77 34 6.91 Yes -2 0 No 0 0 No -33 0.61 No 35 30.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89648468 + NM_000314 PTEN 0 . . . 0.49 65.79 22 6.89 Yes 76 0.65 No 0 0 No -32 0.62 No 47 61.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68339289 + NM_133509 RAD51B 0 . . . 7.93 87.72 40 4.89 No 1 1.29 Yes 0 0 No -31 0.71 Yes 50 49.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47724702 + NM_000251 MSH2 0 . . . 2.49 72.62 25 4.84 No 13 1.29 Yes 0 0 No -22 0.82 Yes 45 94.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68361169 + NM_133509 RAD51B 0 . . . 8.65 81.53 20 5.92 Yes 70 1.39 Yes 0 0 No -23 0.82 Yes 32 95.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48027988 + NM_000179 MSH6 0 . . . 1.03 62.53 15 5.8 Yes 45 -4.05 No 0 0 No -27 0.21 No 16 30.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131943652 + NM_005732 RAD50 0 . . . 4.18 70.79 19 5 No 51 -1.91 No 0 0 No -25 0.34 No 40 57.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94179410 - NM_005591 MRE11 0 . . . 4.04 85.02 31 5.55 No 4 0.45 No 0 0 No -22 0.69 Yes 44 90.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47794983 + NM_000251 MSH2 0 . . . 1.6 69.59 65 8.39 Yes 25 -1.38 No 0 0 No -49 0.7 Yes 47 69.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59873771 - NM_032043 BRIP1 0 . . . 1.49 58.06 15 4.47 No 36 0.18 No 0 0 No -13 0.61 No 49 45.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015556 + NM_000179 MSH6 0 . . . 1.71 68.84 18 6.57 Yes 47 0.68 No 0 0 No -27 0.48 No 48 52.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90959788 - NM_002485 NBN 0 . . . 0.31 67.48 13 5.91 Yes 1 0.72 No 0 0 No -13 0.34 No 47 44.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131931207 + NM_005732 RAD50 0 . . . 0.49 69.74 19 4.69 No 25 0.27 No 0 0 No -54 0.84 Yes 44 53.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41016506 + NM_001164269 RAD51 0 . . . 2.61 71.33 20 5.64 Yes 12 0.71 No 0 0 No -25 0.4 No 46 78.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41233434 - NM_007294 BRCA1 0 . . . 4.53 83.73 21 5.33 No 7 0.34 No 0 0 No -20 0.42 No 51 88.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68713604 + NM_133509 RAD51B 0 . . . 5.6 80.19 27 5.2 No 62 0.23 No 0 0 No -26 0.6 No 44 62.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6047046 - NM_000535 PMS2 0 . . . 4.89 70.37 47 6.44 Yes 24 0.2 No 0 0 No -23 0.88 Yes 53 65.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190743620 + NM_000534 PMS1 0 . . . 3.47 0 32 6.08 Yes 67 0.52 No 0 0 No -31 0.76 Yes 50 83.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84394810 - NM_139076 FAM175A 0 . . . 3.59 68.15 9 3.87 No 51 0.79 Yes 0 0 No -28 0.6 No 39 42.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68945195 + NM_133509 RAD51B 0 . . . 5.19 75.13 30 6.3 Yes -4 1 Yes 0 0 No -20 0.66 No 42 55.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68430786 + NM_133509 RAD51B 0 . . . 9.88 90.67 17 4.8 No 16 1.74 Yes 0 0 No -28 0.29 No 42 93.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75493609 - NM_001040108 MLH3 0 . . . 0.42 74.73 21 5.19 No 33 1.01 Yes 0 0 No -20 0.81 Yes 39 42.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32930785 + NM_000059 BRCA2 0 . . . 3.79 80.7 25 5.33 No 4 1.33 Yes 0 0 No -24 0.8 Yes 47 49.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68925442 + NM_133509 RAD51B 0 . . . 8.61 84.99 45 6.7 Yes 42 -2.53 No 0 0 No -26 0.83 Yes 37 60.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68804589 + NM_133509 RAD51B 0 . . . 5.07 85.92 26 6.23 Yes 58 1.33 Yes 0 0 No -25 0.49 No 43 87.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59935634 - NM_032043 BRIP1 0 . . . 5.03 75.08 16 5.83 Yes 60 0.36 No 0 0 No -15 0.51 No 50 87.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29107213 - NM_001005735 CHEK2 0 . . . 3.01 88.86 57 8.09 Yes 10 0.31 No 0 0 No -29 0.76 Yes 44 55.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75513354 - NM_001040108 MLH3 0 . . . 1.27 83.11 39 6.4 Yes -2 0.36 No 19 0.53 Yes -38 0.89 Yes 52 47.84 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 68844431 + NM_004360 CDH1 0 . . . 1.13 58.41 29 4.6 No 18 0.92 Yes 0 0 No -28 0.79 Yes 40 68.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47751893 + NM_000251 MSH2 0 . . . 4.22 81.57 26 4.49 No 69 0.53 No 0 0 No -25 0.72 Yes 27 57.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56793437 + NM_058216 RAD51C 0 . . . 1.73 76.63 36 4.56 No 58 -3.87 No 0 0 No -26 0.7 Yes 53 48.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90969367 - NM_002485 NBN 0 . . . 4.07 78.14 15 4.58 No 49 1.37 Yes 0 0 No -24 0.42 No 33 43.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59816860 - NM_032043 BRIP1 0 . . . 1.84 61.15 23 5.23 No 29 1.18 Yes 0 0 No -26 0.65 No 40 84.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21974939 - NM_000077 CDKN2A 0 . . . 1.06 79.23 64 8.95 Yes 69 1.69 Yes 0 0 No -27 0.74 Yes 52 63.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68543074 + NM_133509 RAD51B 0 . . . 1.6 70.27 25 5.2 No 31 0.54 No 0 0 No -22 0.86 Yes 47 46.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29129743 - NM_001005735 CHEK2 0 . . . 3.6 85.02 34 6.27 Yes 4 1.2 Yes 0 0 No -29 0.58 No 45 61.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68759834 + NM_133509 RAD51B 0 . . . 1.44 80.28 20 4.96 No 63 1.08 Yes 0 0 No -20 0.46 No 48 71.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68865076 + NM_004360 CDH1 0 . . . 3.44 88.29 19 4.77 No 9 0.89 Yes 0 0 No -21 0.31 No 49 95.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89704669 + NM_000314 PTEN 0 . . . 1.62 62.12 38 6.27 Yes 71 -5.35 No 0 0 No -37 0.84 Yes 50 53.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108126799 + NM_000051 ATM 0 . . . 3.31 0 20 6.29 Yes 7 1.11 Yes 0 0 No -26 0.54 No 47 66.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68699683 + NM_133509 RAD51B 0 . . . 4.76 75.3 14 3.78 No 73 -5.31 No 0 0 No -20 0.71 Yes 47 67.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190692099 + NM_000534 PMS1 0 . . . 3.5 70.31 28 5.38 No 2 0.07 No 0 0 No -27 0.87 Yes 52 44.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59921950 - NM_032043 BRIP1 0 . . . 7.57 84.61 14 5.49 No 33 0.25 No 0 0 No -23 0.87 Yes 25 67.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47635442 + NM_000251 MSH2 0 . . . 6.38 90.36 14 4.47 No 7 1.15 Yes 0 0 No -40 0.45 No 47 77.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59914515 - NM_032043 BRIP1 0 . . . 1.97 75.4 27 3.99 No 65 1.18 Yes 0 0 No -26 0.64 No 51 47.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59937459 - NM_032043 BRIP1 0 . . . 6.04 71.79 16 5.19 No -3 0.44 No 0 0 No -20 0.52 No 42 87.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68827805 + NM_004360 CDH1 0 . . . 2.6 79.64 21 4.73 No 58 -3.87 No 0 0 No -25 0.54 No 48 82.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94166537 - NM_005591 MRE11 0 . . . 2.61 77.95 15 5.2 No 57 0.3 No 0 0 No -14 0.48 No 49 50.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190659295 + NM_000534 PMS1 0 . . . 3.97 77.9 21 5.04 No 69 0.87 Yes 0 0 No -45 0.54 No 41 75.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105201349 + NM_021930 RINT1 0 . . . 6.32 85.02 41 6.82 Yes 4 1.9 Yes 0 0 No -26 0.62 No 54 64.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59872034 - NM_032043 BRIP1 0 . . . 2.74 0 37 5.68 Yes 42 1.13 Yes 0 0 No -32 0.53 No 42 40.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108210196 + NM_000051 ATM 0 . . . 8.32 83.45 10 4 No 9 1.13 Yes 0 0 No -29 0.57 No 49 47.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89638363 + NM_000314 PTEN 0 . . . 2.81 65.41 22 6.24 Yes -1 0.01 No 0 0 No -21 0.7 Yes 44 61.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215632349 - NM_000465 BARD1 0 . . . 0.24 66.66 26 5.66 Yes 44 0.65 No 0 0 No -26 0.51 No 14 18.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32925692 + NM_000059 BRCA2 0 . . . 2.87 66.15 27 4.82 No 66 -4.97 No 0 0 No -26 0.22 No 56 20.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105198113 + NM_021930 RINT1 0 . . . 3.49 73.28 31 5.73 Yes 75 -4.1 No 0 0 No -30 0.87 Yes 37 43.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108218086 + NM_000051 ATM 0 . . . 1.6 73.13 35 7.07 Yes 63 -4.77 No 0 0 No -35 0.4 No 50 52.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68522900 + NM_133509 RAD51B 0 . . . 2.95 0 37 7.89 Yes 23 0.69 No 0 0 No -31 0.89 Yes 35 86.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68618497 + NM_133509 RAD51B 0 . . . 4.4 72.61 17 4.58 No 72 0.58 No 0 0 No -19 0.44 No 42 61.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59876944 - NM_032043 BRIP1 0 . . . 7.58 78.82 18 5.4 No 62 -3.38 No 0 0 No -18 0.44 No 41 91.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69015286 + NM_133509 RAD51B 0 . . . 4.34 84.42 25 5.9 Yes 66 0.29 No 0 0 No -24 0.5 No 53 25.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59812592 - NM_032043 BRIP1 0 . . . 2.65 71.82 30 5.92 Yes 68 1.26 Yes 0 0 No -25 0.66 No 37 70.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68864119 + NM_004360 CDH1 0 . . . 3.68 70.85 21 4.69 No 29 2 Yes 0 0 No -20 0.83 Yes 40 84.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69125551 + NM_133509 RAD51B 0 . . . 2.01 75.79 20 5.1 No 48 1.03 Yes 0 0 No -19 0.73 Yes 36 73.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23642260 - NM_024675 PALB2 0 . . . 4.85 83.5 31 5.74 Yes 19 0.66 No 0 0 No -28 0.29 No 39 67.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59806970 - NM_032043 BRIP1 0 . . . 4.62 89.39 23 4.84 No 18 0.19 No 0 0 No -22 0.72 Yes 45 67.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94181508 - NM_005591 MRE11 0 . . . 3.09 74.92 11 5.65 Yes 19 2.15 Yes 0 0 No -25 0.42 No 51 66.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68566331 + NM_133509 RAD51B 0 . . . 0.19 0 18 6.13 Yes 12 0.51 No 0 0 No -32 0.67 Yes 41 58.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68580489 + NM_133509 RAD51B 0 . . . 1.79 72.43 19 4.51 No 72 -5.52 No 0 0 No -18 0.59 No 51 73.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89723884 + NM_000314 PTEN 0 . . . 8.53 79.55 27 5.39 No 2 0.98 Yes 0 0 No -26 0.71 Yes 46 42.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108152511 + NM_000051 ATM 0 . . . 1.1 0 16 5.82 Yes 5 0.85 Yes 0 0 No -15 0.38 No 43 54.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68423671 + NM_133509 RAD51B 0 . . . 6.1 86.2 16 4.55 No 2 0.49 No 0 0 No -57 0.48 No 43 65.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59933458 - NM_032043 BRIP1 0 . . . 9.58 78.06 23 6.14 Yes 25 0.41 No 0 0 No -22 0.85 Yes 33 87.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37087628 + NM_000249 MLH1 0 . . . 2.26 62.2 16 5.67 Yes 75 0.1 No 0 0 No -25 0.47 No 45 86.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68829580 + NM_004360 CDH1 0 . . . 5.87 92.4 57 8.82 Yes 5 1.22 Yes 0 0 No -56 0.28 No 53 78.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47777371 + NM_000251 MSH2 0 . . . 3.1 73.32 26 6.32 Yes 30 1.05 Yes 0 0 No -23 0.52 No 27 23.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68825488 + NM_004360 CDH1 0 . . . 0.73 68.06 35 5.96 Yes 47 0.87 Yes 0 0 No -35 0.26 No 48 54.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89627363 + NM_000314 PTEN 0 . . . 5.39 80.57 50 5.41 No 62 0.76 No 0 0 No -38 0.28 No 50 82.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56797275 + NM_058216 RAD51C 0 . . . 2.83 79.69 19 6.18 Yes 75 1.18 Yes 0 0 No -18 0.65 No 50 80.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59854562 - NM_032043 BRIP1 0 . . . 1.88 60.43 17 5.12 No 17 0.94 Yes 0 0 No -31 0.69 Yes 37 76.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89682384 + NM_000314 PTEN 0 . . . 5.09 85.71 9 3.87 No 54 -1.02 No 0 0 No -33 0.8 Yes 46 87.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59760639 - NM_032043 BRIP1 0 . . . 1.92 71.44 15 5.29 No 4 0.87 Yes 0 0 No -29 0.46 No 47 63.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68366845 + NM_133509 RAD51B 0 . . . 3.95 73.98 20 4.58 No 49 1.31 Yes 0 0 No -19 0.77 Yes 46 87.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6024579 - NM_000535 PMS2 0 . . . 4.64 75.59 16 5.07 No 58 -2.77 No 0 0 No -20 0.75 Yes 43 37.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68301839 + NM_133509 RAD51B 0 . . . 6.2 83.73 15 3.8 No 0 1.27 Yes 0 0 No -21 0.69 Yes 44 49.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59897681 - NM_032043 BRIP1 0 . . . 4.99 78.99 17 5.92 Yes 75 0.23 No 0 0 No -21 0.29 No 43 67.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45806150 - NM_001048171 MUTYH 0 . . . 4.27 81.95 21 4.69 No 55 0.99 Yes 0 0 No -20 0.89 Yes 46 49.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59915878 - NM_032043 BRIP1 0 . . . 3.61 84.17 20 7.07 Yes 69 1.89 Yes 0 0 No -19 0.43 No 16 52.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94214764 - NM_005591 MRE11 0 . . . 6.62 75.09 19 5 No 67 0.46 No 0 0 No -53 0.51 No 49 69.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68769351 + NM_004360 CDH1 0 . . . 0.17 74.68 16 4.4 No 53 0.27 No 0 0 No -22 0.88 Yes 36 39.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47779399 + NM_000251 MSH2 0 . . . 3.41 62.75 36 5.18 No 75 -3.77 No 0 0 No -28 0.63 No 36 58.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190715835 + NM_000534 PMS1 0 . . . 8.3 88.72 11 5.29 No 5 1.23 Yes 0 0 No -21 0.35 No 40 43.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89694938 + NM_000314 PTEN 0 . . . 2.24 52.25 23 5.36 No 29 0.75 No 0 0 No -22 0.77 Yes 29 65.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190718453 + NM_000534 PMS1 0 . . . 1.28 77.24 16 5.2 No 34 1.18 Yes 0 0 No -26 0.52 No 24 37.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23647136 - NM_024675 PALB2 0 . . . 1.95 85.06 19 4.07 No 71 -5.82 No 0 0 No -19 0.52 No 50 76.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68846447 + NM_133509 RAD51B 0 . . . 9.1 75.52 21 5.64 Yes 40 -2.08 No 0 0 No -20 0.48 No 48 45.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68628718 + NM_133509 RAD51B 0 . . . 0.97 0 20 5 No 67 -4.15 No 0 0 No -25 0.75 Yes 50 46.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47714156 + NM_000251 MSH2 0 . . . 1.91 0 29 5.91 Yes 39 -3.29 No 0 0 No -28 0.78 Yes 49 64.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59895005 - NM_032043 BRIP1 0 . . . 2.96 68.33 25 5.91 Yes 76 0.21 No 0 0 No -24 0.89 Yes 43 84.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131954980 + NM_005732 RAD50 0 . . . 0.64 74.23 21 5.66 Yes 31 0.37 No 0 0 No -20 0.83 Yes 46 54.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69041463 + NM_133509 RAD51B 0 . . . 8.35 84.39 20 4.13 No 3 0.83 Yes 0 0 No -19 0.74 Yes 40 58.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108093148 + NM_000051 ATM 0 . . . 2.13 77.57 19 4.69 No 76 -4.2 No 0 0 No -23 0.88 Yes 44 42.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105193791 + NM_021930 RINT1 0 . . . 0.64 84.22 23 6.71 Yes 33 0.61 No 0 0 No -22 0.71 Yes 51 53.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68879115 + NM_133509 RAD51B 0 . . . 4.74 79.89 40 5.76 Yes 64 0.47 No 0 0 No -24 0.51 No 43 71.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68382316 + NM_133509 RAD51B 0 . . . 6.98 77.89 20 6 Yes 56 -2.63 No 0 0 No -19 0.42 No 49 83.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69146190 + NM_133509 RAD51B 0 . . . 6.82 79.78 27 5.1 No 24 1.3 Yes 0 0 No -26 0.84 Yes 34 50.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108197968 + NM_000051 ATM 0 . . . 4.03 71.29 21 3.96 No 73 0.6 No 0 0 No -24 0.8 Yes 41 52.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47644497 + NM_000251 MSH2 0 . . . 2.03 72.62 26 4.74 No -4 0.73 No 0 0 No -25 0.95 Yes 39 68.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68317319 + NM_133509 RAD51B 0 . . . 8.49 93.8 15 5 No 9 0.02 No 0 0 No -14 0.36 No 43 80.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33427246 - NM_002878 RAD51D 0 . . . 4.14 75.58 41 4.84 No 49 0.4 No 0 0 No -22 0.73 Yes 50 36.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68638352 + NM_133509 RAD51B 0 . . . 1.4 71.42 30 5.83 Yes -2 0.67 No 0 0 No -20 0.35 No 50 76.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69066066 + NM_133509 RAD51B 0 . . . 0.53 0 19 5.89 Yes 39 1.1 Yes 0 0 No -22 0.82 Yes 47 66.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190687199 + NM_000534 PMS1 0 . . . 0.16 0 32 5.57 Yes 26 1.1 Yes 0 0 No -31 0.45 No 36 90.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32957070 + NM_000059 BRCA2 0 . . . 5.39 82.92 29 5.92 Yes 70 -3.33 No 0 0 No -28 0.72 Yes 56 46.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220855 - NM_007294 BRCA1 0 . . . 0.38 64.32 17 4.47 No 23 0.92 Yes 0 0 No -31 0.49 No 26 37.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32970191 + NM_000059 BRCA2 0 . . . 3.88 75.1 54 7.43 Yes 32 -2.15 No 0 0 No -29 0.92 Yes 44 58.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94201645 - NM_005591 MRE11 0 . . . 3.99 73.35 13 4.3 No 51 -3.71 No 0 0 No -25 0.49 No 54 62.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32901443 + NM_000059 BRCA2 0 . . . 0.98 61.18 20 4.55 No 25 0.62 No 0 0 No -31 0.74 Yes 33 40.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94215649 - NM_005591 MRE11 0 . . . 5.42 78.42 26 6.15 Yes 46 2.02 Yes 0 0 No -25 0.9 Yes 12 82.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48008978 + NM_000179 MSH6 0 . . . 3.36 74.46 33 5.81 Yes 6 0.67 No 0 0 No -32 0.53 No 46 52.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68683543 + NM_133509 RAD51B 0 . . . 8.19 81.87 28 6.19 Yes 2 0.5 No 0 0 No -27 0.94 Yes 56 62.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89645283 + NM_000314 PTEN 0 . . . 3.22 73.56 42 6.4 Yes 35 0.52 No 0 0 No -34 0.67 Yes 30 59.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89695043 + NM_000314 PTEN 0 . . . 1 60.6 24 6.6 Yes 60 0.3 No 0 0 No -23 0.91 Yes 35 73.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47776427 + NM_000251 MSH2 0 . . . 2.71 66.88 19 4.69 No 46 -3.8 No 0 0 No -18 0.58 No 52 45.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190728745 + NM_000534 PMS1 0 . . . 1.91 60.63 25 5.47 No 74 -2.49 No 0 0 No -30 0.54 No 43 57.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89716200 + NM_000314 PTEN 0 . . . 0.21 0 42 6.06 Yes 39 -4.25 No 0 0 No -41 0.73 Yes 32 48.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7572058 - NM_000546 TP53 0 . . . 2.73 68.6 47 8.46 Yes 19 0.66 No 0 0 No -46 0.88 Yes 39 91.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59894393 - NM_032043 BRIP1 0 . . . 5.36 83.29 33 6.12 Yes 38 1.01 Yes 0 0 No -36 0.63 No 45 85.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68615222 + NM_133509 RAD51B 0 . . . 4.84 72.81 21 4.6 No 63 0.63 No 0 0 No -20 0.83 Yes 48 55.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94150473 - NM_005591 MRE11 0 . . . 0.08 68.53 21 3.84 No 57 0.04 No 0 0 No -45 0.91 Yes 46 86.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68810074 + NM_004360 CDH1 0 . . . 0.75 80.12 28 5.2 No 11 1.33 Yes 0 0 No -27 0.53 No 47 92.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68381562 + NM_133509 RAD51B 0 . . . 5.74 73.45 25 4.41 No 71 0.72 No 0 0 No -25 0.42 No 44 76.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32929466 + NM_000059 BRCA2 0 . . . 7.38 91.9 15 4.58 No 7 0.66 No 0 0 No -27 0.45 No 39 57.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69016072 + NM_133509 RAD51B 0 . . . 3.27 72.15 47 7.19 Yes 55 1.05 Yes 0 0 No -28 0.46 No 52 52.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68829499 + NM_004360 CDH1 0 . . . 1.95 73.06 26 5.1 No 16 1.38 Yes 0 0 No -24 0.66 No 42 93.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68830037 + NM_004360 CDH1 0 . . . 2.68 74.45 22 5.72 Yes 40 -2.97 No 0 0 No -21 0.89 Yes 48 70.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68363210 + NM_133509 RAD51B 0 . . . 3.19 70.86 23 5.39 No 46 -4.77 No 0 0 No -22 0.94 Yes 47 80.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108146261 + NM_000051 ATM 0 . . . 3.72 0 30 9.56 Yes 2 -1.68 No 0 0 No -29 0.94 Yes 36 62.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59817296 - NM_032043 BRIP1 0 . . . 1.41 75.84 39 5.66 Yes 72 0.13 No 0 0 No -25 0.95 Yes 45 86.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59768863 - NM_032043 BRIP1 0 . . . 3.09 69.25 16 5.36 No 75 -5.01 No 0 0 No -26 0.56 No 48 44.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69064717 + NM_133509 RAD51B 0 . . . 0.21 64.44 19 5.83 Yes 29 0.28 No 0 0 No -27 0.83 Yes 49 84.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94164005 - NM_005591 MRE11 0 . . . 1.42 64.16 27 5.19 No 57 -2.47 No 0 0 No -27 0.59 No 52 87.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59897865 - NM_032043 BRIP1 0 . . . 0.07 61.29 17 6.08 Yes 56 0.21 No 0 0 No -16 0.72 Yes 50 80.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59851514 - NM_032043 BRIP1 0 . . . 6.16 71.53 26 5.62 Yes 47 0.35 No 0 0 No -25 0.81 Yes 48 64.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152362966 - NM_005431 XRCC2 0 . . . 3.35 0 30 5.57 Yes 2 0.02 No 0 0 No -29 0.57 No 50 58.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68846519 + NM_133509 RAD51B 0 . . . 1.54 74.43 25 7.61 Yes 21 -2.79 No 0 0 No -24 0.62 No 44 91.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68407310 + NM_133509 RAD51B 0 . . . 5.86 84.73 32 5.7 Yes 32 2.11 Yes 0 0 No -31 0.8 Yes 45 43.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68764453 + NM_133509 RAD51B 0 . . . 1.87 0 14 4.47 No 6 1.04 Yes 0 0 No -40 0.67 Yes 52 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52435418 - NM_004656 BAP1 0 . . . 10.49 91.28 27 5.56 Yes 6 0.31 No 0 0 No -26 0.94 Yes 46 88.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33445274 - NM_002878 RAD51D 0 . . . 2.96 80.45 37 6.15 Yes 23 0.33 No 0 0 No -31 0.64 No 38 82.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59818774 - NM_032043 BRIP1 0 . . . 3.98 75.01 20 5.1 No -2 0.45 No 0 0 No -19 0.76 Yes 51 52.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68836699 + NM_133509 RAD51B 0 . . . 4.16 82.82 52 7.21 Yes 61 0.32 No 0 0 No -25 0.86 Yes 49 74.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69132195 + NM_133509 RAD51B 0 . . . 2.51 79.7 40 6.91 Yes 24 -1.8 No 0 0 No -29 0.65 No 47 79.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47668903 + NM_000251 MSH2 0 . . . 6.45 90.14 50 7.41 Yes 45 1.55 Yes 0 0 No -28 0.54 No 23 71.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68707752 + NM_133509 RAD51B 0 . . . 3.35 66.24 22 5.66 Yes 44 1.02 Yes 0 0 No -21 0.49 No 41 62.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69091946 + NM_133509 RAD51B 0 . . . 0.3 64.12 23 5.2 No 53 -2.4 No 0 0 No -22 0.89 Yes 47 66.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32905910 + NM_000059 BRCA2 0 . . . 5.38 83.58 13 4.05 No 52 1.16 Yes 0 0 No -20 0.39 No 50 48.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37075629 + NM_000249 MLH1 0 . . . 8.2 86.11 25 5.57 Yes 3 0.66 No 0 0 No -24 0.71 Yes 44 95.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68530796 + NM_133509 RAD51B 0 . . . 2.86 70.15 19 5.41 No 61 0.95 Yes 0 0 No -18 0.33 No 34 75.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215604789 - NM_000465 BARD1 0 . . . 3.74 72.45 21 5.74 Yes 62 0.73 No 0 0 No -20 0.86 Yes 38 39.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68993962 + NM_133509 RAD51B 0 . . . 0.77 68.66 20 4.8 No 6 1.34 Yes 0 0 No -19 0.94 Yes 41 53.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94215477 - NM_005591 MRE11 0 . . . 3.92 75.21 46 4.94 No 74 -3.97 No 0 0 No -25 0.65 No 48 66.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68451618 + NM_133509 RAD51B 0 . . . 1.37 64.68 19 8.06 Yes 54 0.57 No 0 0 No -18 0.38 No 11 43.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94212513 - NM_005591 MRE11 0 . . . 9.87 79.93 14 4.47 No 14 0.7 No 0 0 No -18 0.31 No 47 49.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68838061 + NM_004360 CDH1 0 . . . 4.42 84.17 17 5.29 No 59 0.82 Yes 0 0 No -21 0.61 No 11 22.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59898227 - NM_032043 BRIP1 0 . . . 1.53 72.37 27 5.74 Yes 21 0.29 No 0 0 No -26 0.88 Yes 47 68.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45793520 - NM_001048171 MUTYH 0 . . . 2.51 70.89 28 6.27 Yes NA NA NA 0 0 No -27 0.7 Yes 38 70.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68287720 + NM_133509 RAD51B 0 . . . 1.33 68.63 68 7.54 Yes 11 0.92 Yes 0 0 No -28 0.72 Yes 47 45.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68827923 + NM_133509 RAD51B 0 . . . 0.61 0 37 6.85 Yes 14 0.33 No 0 0 No -36 0.7 Yes 44 78.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131899756 + NM_005732 RAD50 0 . . . 2.81 0 16 4.06 No 52 0.7 No 0 0 No -32 0.21 No 40 76.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68533656 + NM_133509 RAD51B 0 . . . 3.65 92.46 20 4.59 No 3 0.44 No 0 0 No -30 0.52 No 46 85.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48030267 + NM_000179 MSH6 0 . . . 0.11 74.73 22 3.59 No 33 1.34 Yes 0 0 No -39 0.31 No 18 43.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45801910 - NM_001048171 MUTYH 0 . . . 3.68 70.85 18 5.9 Yes 13 1.02 Yes 0 0 No -29 0.51 No 40 82.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68398916 + NM_133509 RAD51B 0 . . . 4.79 65.33 30 4.97 No 46 0.85 Yes 0 0 No -29 0.9 Yes 45 64.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105197377 + NM_021930 RINT1 0 . . . 0.4 71.28 18 5.45 No 39 0.23 No 0 0 No -25 0.59 No 58 50.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68790061 + NM_133509 RAD51B 0 . . . 7.72 84.67 18 6.16 Yes 13 0.64 No 0 0 No -31 0.72 Yes 45 66.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68866958 + NM_133509 RAD51B 0 . . . 4.53 73.77 32 5.82 Yes 55 0.47 No 0 0 No -31 0.51 No 45 54.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23650948 - NM_024675 PALB2 0 . . . 2.31 80.34 37 6.24 Yes 33 1.17 Yes 0 0 No -36 0.7 Yes 14 28.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75514489 - NM_001040108 MLH3 0 . . . 0.8 64.72 11 4.95 No 34 -4.22 No 0 0 No -10 0.84 Yes 55 20.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68601045 + NM_133509 RAD51B 0 . . . 2.82 63.58 15 5 No 19 0.65 No 0 0 No -18 0.36 No 39 83.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33429854 - NM_002878 RAD51D 0 . . . 1.21 79.63 25 4.92 No 58 1.67 Yes 0 0 No -28 0.59 No 42 84.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108160446 + NM_000051 ATM 0 . . . 0.14 76.44 33 4.63 No 51 0.78 Yes 0 0 No -15 0.46 No 33 92.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69035840 + NM_133509 RAD51B 0 . . . 3.11 74.15 25 5.57 Yes 24 1.16 Yes 0 0 No -24 0.84 Yes 34 97.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23650594 - NM_024675 PALB2 0 . . . 0.44 83.52 18 4.88 No 37 0.85 Yes 0 0 No -43 0.78 Yes 44 60.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69104586 + NM_133509 RAD51B 0 . . . 1.91 68.49 25 4.87 No 68 0.42 No 0 0 No -25 0.59 No 46 30.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68731059 + NM_133509 RAD51B 0 . . . 0.92 59.69 35 6.08 Yes -1 0.08 No 0 0 No -34 0.4 No 48 74.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37073383 + NM_000249 MLH1 0 . . . 0.62 65.79 29 7.14 Yes 27 0.86 Yes 0 0 No -28 0.91 Yes 45 36.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68987052 + NM_133509 RAD51B 0 . . . 1.95 75.48 27 5.56 Yes 66 0.61 No 0 0 No -26 0.65 No 47 70.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68322628 + NM_133509 RAD51B 0 . . . 5.78 78.89 21 3.35 No 20 2.04 Yes 0 0 No -21 0.68 Yes 38 91.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68478800 + NM_133509 RAD51B 0 . . . 1.15 75.43 19 7.07 Yes 26 0.38 No 0 0 No -18 0.71 Yes 55 45.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105191801 + NM_021930 RINT1 0 . . . 4.95 84.76 38 6.31 Yes 76 0.56 No 0 0 No -21 0.37 No 49 80.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215624587 - NM_000465 BARD1 0 . . . 0.75 64.88 19 8.7 Yes 72 -5.33 No 0 0 No -18 0.61 No 45 67.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68366937 + NM_133509 RAD51B 0 . . . 0.25 64.44 24 4.93 No 31 0.61 No 0 0 No -28 0.81 Yes 20 35.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68885132 + NM_133509 RAD51B 0 . . . 2.92 71.4 35 8.18 Yes 49 1.14 Yes 0 0 No -22 0.47 No 49 74.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68927927 + NM_133509 RAD51B 0 . . . 3.07 73.73 49 7 Yes 2 0.94 Yes 0 0 No -48 0.76 Yes 48 68.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104183349 - NM_001100119 XRCC3 0 . . . 4.56 72.02 21 5.02 No 61 2.04 Yes 0 0 No -20 0.88 Yes 43 61.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45804817 - NM_001048171 MUTYH 0 . . . 8.17 84.59 27 7.27 Yes 22 0.48 No 0 0 No -26 0.42 No 36 36.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89663120 + NM_000314 PTEN 0 . . . 1.32 69.7 20 4.69 No 63 -2.84 No 0 0 No -19 0.48 No 46 55.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68309444 + NM_133509 RAD51B 0 . . . 3.74 70.41 28 5.38 No 44 0.2 No 0 0 No -27 0.68 Yes 46 52.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90973201 - NM_002485 NBN 0 . . . 7.34 80.25 17 6.92 Yes 74 1.34 Yes 0 0 No -16 0.77 Yes 43 59.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29085767 - NM_001005735 CHEK2 0 . . . 4.74 77.89 55 6.28 Yes 8 1.9 Yes 0 0 No -26 0.74 Yes 38 54.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69042605 + NM_133509 RAD51B 0 . . . 3.08 82.85 25 5.09 No 75 0.19 No 0 0 No -24 0.74 Yes 50 29.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68784045 + NM_004360 CDH1 0 . . . 0.73 65.44 29 5.29 No 45 -1.34 No 0 0 No -28 0.57 No 47 89.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59837080 - NM_032043 BRIP1 0 . . . 0.75 65.5 21 5.07 No 49 0.3 No 0 0 No -20 0.69 Yes 43 35.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41260638 - NM_007294 BRCA1 0 . . . 5.43 75.9 19 4.66 No 17 0.41 No 0 0 No -43 0.45 No 41 71.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215603772 - NM_000465 BARD1 0 . . . 2.1 84.39 21 4.9 No 3 0.83 Yes 0 0 No -20 0.82 Yes 50 83.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68830792 + NM_004360 CDH1 0 . . . 2.34 76.74 20 7.14 Yes 58 -1.12 No 0 0 No -19 0.79 Yes 48 56.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69038734 + NM_133509 RAD51B 0 . . . 2.28 69.58 19 4.99 No 25 -2.91 No 0 0 No -23 0.51 No 18 41.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23618462 - NM_024675 PALB2 0 . . . 5.34 89.74 46 6.16 Yes 31 -3.2 No 0 0 No -20 0.82 Yes 50 75.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59893507 - NM_032043 BRIP1 0 . . . 1.45 71.59 23 4.79 No 67 1.29 Yes 0 0 No -22 0.52 No 47 60.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6041798 - NM_000535 PMS2 0 . . . 4.22 68.93 38 5.95 Yes 52 0.4 No 0 0 No -37 0.59 No 43 80.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89663795 + NM_000314 PTEN 0 . . . 7.1 84.17 97 11.16 Yes 57 0.78 Yes 0 0 No -33 0.91 Yes 17 59.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68597831 + NM_133509 RAD51B 0 . . . 4.07 69.94 27 5.47 No 52 0.3 No 0 0 No -26 0.93 Yes 29 40.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89689611 + NM_000314 PTEN 0 . . . 4.52 74.87 20 4.9 No 54 0.04 No 0 0 No -19 0.93 Yes 46 58.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190688225 + NM_000534 PMS1 0 . . . 4.83 75.82 31 6 Yes 32 1.11 Yes 0 0 No -30 0.75 Yes 46 62.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68852593 + NM_133509 RAD51B 0 . . . 5.93 85.47 25 4.9 No 54 1.2 Yes 0 0 No -24 0.58 No 40 76.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48008130 + NM_000179 MSH6 0 . . . 4.99 71.02 28 5.37 No -3 0.15 No 0 0 No -42 0.53 No 48 60.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108195247 + NM_000051 ATM 0 . . . 2.88 77.35 17 4.58 No 6 0.6 No 0 0 No -44 0.49 No 48 84.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47793077 + NM_000251 MSH2 0 . . . 4.69 88.68 39 6.26 Yes 19 1.15 Yes 0 0 No -26 0.38 No 45 69.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131903460 + NM_005732 RAD50 0 . . . 2.9 71.9 24 6.16 Yes 7 0.11 No 0 0 No -23 0.86 Yes 51 69.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94174814 - NM_005591 MRE11 0 . . . 0.82 0 25 5.39 No 52 0.33 No 0 0 No -25 0.43 No 42 46.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59858967 - NM_032043 BRIP1 0 . . . 4.76 74.62 26 5.1 No 0 1.28 Yes 0 0 No -47 0.69 Yes 45 62.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68650189 + NM_133509 RAD51B 0 . . . 0.81 74.57 25 5.1 No 31 -2.34 No 0 0 No -24 0.91 Yes 48 74.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47682569 + NM_000251 MSH2 0 . . . 2.86 74.81 26 4.7 No 67 1.68 Yes 0 0 No -25 0.56 No 35 97.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69067585 + NM_133509 RAD51B 0 . . . 4.18 81.96 13 4.9 No 57 0.01 No 0 0 No -47 0.78 Yes 36 93.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59880084 - NM_032043 BRIP1 0 . . . 0.33 76.47 20 6.06 Yes 9 1.21 Yes 0 0 No -22 0.56 No 49 95.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47706993 + NM_000251 MSH2 0 . . . 1.41 70.76 18 4.36 No 54 -4.29 No 0 0 No -17 0.69 Yes 46 55.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68693626 + NM_133509 RAD51B 0 . . . 2.22 0 16 4.69 No 72 1.12 Yes 0 0 No -16 0.39 No 48 65.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59783001 - NM_032043 BRIP1 0 . . . 2.68 68.32 27 4.07 No 32 0.66 No 0 0 No -21 0.61 No 48 41.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69038385 + NM_133509 RAD51B 0 . . . 8.28 96.35 16 5.15 No 16 1.61 Yes 0 0 No -27 0.73 Yes 42 91.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68820705 + NM_004360 CDH1 0 . . . 0.16 81.33 18 4.21 No 75 -2.29 No 0 0 No -22 0.78 Yes 47 73.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215622098 - NM_000465 BARD1 0 . . . 2.78 79.44 37 6.56 Yes 55 0.37 No 0 0 No -36 0.73 Yes 46 32.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68998366 + NM_133509 RAD51B 0 . . . 7.97 94.28 46 6.65 Yes 20 0.04 No 0 0 No -40 0.51 No 49 27.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59784384 - NM_032043 BRIP1 0 . . . 0.37 56.5 24 5.28 No 71 0.65 No 0 0 No -23 0.84 Yes 41 43.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190655873 + NM_000534 PMS1 0 . . . 7.01 89.5 50 7.25 Yes 75 1.11 Yes 0 0 No -21 0.4 No 46 63.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75483844 - NM_001040108 MLH3 0 . . . 1.06 70.03 12 4.9 No 75 1.25 Yes 0 0 No -45 0.46 No 46 39.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1204011 + NM_000455 STK11 0 . . . 6.57 83.55 27 5.75 Yes 64 0.17 No 0 0 No -32 0.4 No 17 52.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23647931 - NM_024675 PALB2 0 . . . 1.8 61.99 24 5.99 Yes 54 -4.96 No 0 0 No -23 0.77 Yes 47 34.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69037447 + NM_133509 RAD51B 0 . . . 0.61 78.74 28 5.82 Yes 72 2.54 Yes 0 0 No -27 0.87 Yes 50 86.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45806419 - NM_001048171 MUTYH 0 . . . 0.25 70.66 42 6.93 Yes 26 0.83 Yes 0 0 No -30 0.61 No 32 75.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94169897 - NM_005591 MRE11 0 . . . 8.73 76.09 14 4.96 No 56 -4.39 No 0 0 No -21 0.25 No 46 74.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215601402 - NM_000465 BARD1 0 . . . 0.49 0 31 5.76 Yes 31 0.56 No 0 0 No -30 0.48 No 47 71.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68801216 + NM_004360 CDH1 0 . . . 1.69 83.16 28 5.2 No 33 1.01 Yes 0 0 No -27 0.64 No 50 64.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56781186 + NM_058216 RAD51C 0 . . . 5.56 66.45 17 6.08 Yes 33 0.17 No 0 0 No -16 0.73 Yes 53 38.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48012269 + NM_000179 MSH6 0 . . . 3.93 74.01 25 5.2 No 66 2.06 Yes 0 0 No -24 0.84 Yes 45 39.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84381982 - NM_139076 FAM175A 0 . . . 3.43 83.52 31 7.07 Yes 9 1.1 Yes 0 0 No -34 0.82 Yes 49 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105208587 + NM_021930 RINT1 0 . . . 2.4 73.8 35 5.92 Yes 73 0.87 Yes 0 0 No -34 0.68 Yes 31 85.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48008811 + NM_000179 MSH6 0 . . . 5.2 85.02 10 5.48 No 5 1.23 Yes 0 0 No -23 0.46 No 53 80.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56782087 + NM_058216 RAD51C 0 . . . 2.48 78.9 9 5.57 Yes 66 0.87 Yes 0 0 No -21 0.66 No 45 51.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69081395 + NM_133509 RAD51B 0 . . . 4.35 71.65 20 4.91 No 49 1.58 Yes 0 0 No -19 0.66 No 50 81.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68838864 + NM_004360 CDH1 0 . . . 6.63 74.2 14 5 No 45 0.94 Yes 0 0 No -29 0.39 No 38 81.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90991516 - NM_002485 NBN 0 . . . 3.61 70.19 28 5.74 Yes 37 1 Yes 0 0 No -31 0.31 No 40 85.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90970752 - NM_002485 NBN 0 . . . 3.32 78.92 18 5.13 No 49 -1.7 No 0 0 No -22 0.9 Yes 47 48.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89717086 + NM_000314 PTEN 0 . . . 4.25 66.97 40 5.97 Yes 76 0.48 No 0 0 No -21 0.75 Yes 37 79.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68684668 + NM_133509 RAD51B 0 . . . 1.8 68.78 20 4.39 No 46 -3.16 No 0 0 No -19 0.37 No 48 46.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33444787 - NM_002878 RAD51D 0 . . . 0.01 74.23 38 6.62 Yes 74 -3.09 No 0 0 No -27 0.5 No 47 74.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29105429 - NM_001005735 CHEK2 0 . . . 0.93 0 27 5.95 Yes 6 0.51 No 0 0 No -26 0.76 Yes 40 54.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59788184 - NM_032043 BRIP1 0 . . . 5.61 77.96 27 5.2 No 58 1.01 Yes 0 0 No -23 0.75 Yes 54 60.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104178148 - NM_001100119 XRCC3 0 . . . 2.22 84.46 17 3.52 No 51 -2.76 No 0 0 No -21 0.41 No 49 61.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41017552 + NM_001164269 RAD51 0 . . . 4.16 72.54 43 4.58 No 20 0.9 Yes 0 0 No -31 0.59 No 38 85.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59768682 - NM_032043 BRIP1 0 . . . 6.05 79.51 14 3.68 No 44 0.02 No 0 0 No -21 0.62 No 51 56.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41208819 - NM_007294 BRCA1 0 . . . 7.12 77 12 4 No 13 0.27 No 0 0 No -36 0.26 No 45 70.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94221717 - NM_005591 MRE11 0 . . . 3.95 68.82 26 5.48 No 0 0.19 No 0 0 No -25 0.66 No 22 61.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32905468 + NM_000059 BRCA2 0 . . . 3.15 70.19 13 5.38 No 18 1.28 Yes 0 0 No -24 0.38 No 40 71.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94223143 - NM_005591 MRE11 0 . . . 2.43 69.27 29 7.12 Yes 67 -3.68 No 0 0 No -20 0.55 No 42 86.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68785674 + NM_133509 RAD51B 0 . . . 1.41 72.34 13 5.29 No 65 -2.66 No 0 0 No -46 0.39 No 45 96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68730338 + NM_133509 RAD51B 0 . . . 4.5 76.12 14 7.36 Yes 9 1.1 Yes 0 0 No -22 0.76 Yes 46 77.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68742871 + NM_133509 RAD51B 0 . . . 4.98 79.36 19 5.91 Yes -4 0.38 No 0 0 No -18 0.45 No 50 91.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68671445 + NM_133509 RAD51B 0 . . . 3.35 72.28 13 5.29 No 22 0.35 No 0 0 No -22 0.56 No 49 38.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29120230 - NM_001005735 CHEK2 0 . . . 5 84.24 15 4.87 No 6 1.11 Yes 0 0 No -17 0.56 No 47 65.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47787323 + NM_000251 MSH2 0 . . . 7.74 77.71 17 6.07 Yes 45 0.21 No 0 0 No -16 0.8 Yes 13 81.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68797561 + NM_004360 CDH1 0 . . . 0.81 62.35 15 5.74 Yes 41 0.15 No 0 0 No -46 0.45 No 26 44.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29131652 - NM_001005735 CHEK2 0 . . . 5.74 83.46 27 5.73 Yes 58 1.16 Yes 0 0 No -26 0.46 No 55 59.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75512074 - NM_001040108 MLH3 0 . . . 0.16 60.81 12 4.24 No 9 0.99 Yes 0 0 No -50 0.69 Yes 32 21.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32922368 + NM_000059 BRCA2 0 . . . 1.15 69.89 25 5.32 No 68 -3.69 No 0 0 No -30 0.5 No 39 59.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29089282 - NM_001005735 CHEK2 0 . . . 7.2 80.14 35 5.92 Yes 29 1.03 Yes 0 0 No -34 0.37 No 42 69.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89658514 + NM_000314 PTEN 0 . . . 9.09 84.7 27 5.2 No 71 0.42 No 0 0 No -54 0.45 No 47 82.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108140603 + NM_000051 ATM 0 . . . 7.62 70.31 17 4.8 No 76 0.68 No 0 0 No -16 0.69 Yes 34 75.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108096271 + NM_000051 ATM 0 . . . 1.71 75.82 13 6.16 Yes 73 0.66 No 0 0 No -33 0.64 No 49 67.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108098101 + NM_000051 ATM 0 . . . 8.3 93.18 27 3.84 No 32 0.67 No 0 0 No -26 0.91 Yes 42 56.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68819630 + NM_004360 CDH1 0 . . . 8.43 88.74 13 5.27 No 16 1.15 Yes 0 0 No -21 0.86 Yes 41 54.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68811870 + NM_004360 CDH1 0 . . . 6.21 82.31 17 4.69 No 58 1.61 Yes 0 0 No -16 0.32 No 54 69.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59903095 - NM_032043 BRIP1 0 . . . 2.58 77.57 18 5.45 No 73 1.22 Yes 0 0 No -23 0.56 No 47 74.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68642397 + NM_133509 RAD51B 0 . . . 9.84 91.01 42 6.98 Yes 75 0.92 Yes 0 0 No -34 0.58 No 38 57.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131915213 + NM_005732 RAD50 0 . . . 2.44 65.93 55 9.29 Yes 0 0.69 No 0 0 No -38 0.49 No 45 48.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68899062 + NM_133509 RAD51B 0 . . . 3.14 76.94 26 5.01 No 23 1.04 Yes 0 0 No -29 0.54 No 47 85.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190742418 + NM_000534 PMS1 0 . . . 0.18 57.51 18 4.9 No 65 0.75 No 0 0 No -17 0.45 No 17 29.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41209684 - NM_007294 BRCA1 0 . . . 3.53 74.19 29 5.29 No 9 1.19 Yes 0 0 No -25 0.61 No 49 79.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131980564 + NM_005732 RAD50 0 . . . 1.01 65.74 50 6.27 Yes 16 0.99 Yes 0 0 No -43 0.41 No 42 82.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37044888 + NM_000249 MLH1 0 . . . 2.71 84.79 28 5.39 No 2 1.51 Yes 0 0 No -27 0.92 Yes 23 66.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215664908 - NM_000465 BARD1 0 . . . 2.45 63.77 34 6.3 Yes 31 0.82 Yes 0 0 No -33 0.44 No 48 46.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89708308 + NM_000314 PTEN 0 . . . 3.2 78.32 19 4.9 No 58 0.31 No 0 0 No -43 0.48 No 52 36.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32919156 + NM_000059 BRCA2 0 . . . 2.79 74.79 24 5.1 No 44 0.72 No 0 0 No -23 0.9 Yes 36 63.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89706255 + NM_000314 PTEN 0 . . . 4.93 70.81 27 5.39 No 27 0.19 No 0 0 No -27 0.85 Yes 44 53.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131916495 + NM_005732 RAD50 0 . . . 6.4 77.64 24 5.83 Yes 71 0.32 No 0 0 No -23 0.48 No 49 76.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59937623 - NM_032043 BRIP1 0 . . . 2.86 75.39 10 4.57 No 16 -1.62 No 0 0 No -41 0.66 No 42 83.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69143491 + NM_133509 RAD51B 0 . . . 3.77 0 17 4.8 No 15 -0.87 No 0 0 No -20 0.5 No 47 53.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108101126 + NM_000051 ATM 0 . . . 1.87 70.75 16 4.69 No 70 -3.08 No 0 0 No -19 0.7 Yes 41 59.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47698990 + NM_000251 MSH2 0 . . . 2.48 70.2 18 5.36 No 47 -4.4 No 0 0 No -22 0.89 Yes 51 26.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32965148 + NM_000059 BRCA2 0 . . . 6.98 90.28 29 5.91 Yes 3 0.29 No 0 0 No -28 0.9 Yes 44 51.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131961537 + NM_005732 RAD50 0 . . . 7.63 83.91 27 5.38 No 24 1.17 Yes 0 0 No -26 0.77 Yes 48 68.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68840005 + NM_133509 RAD51B 0 . . . 8.84 87.81 17 4.33 No 12 1.38 Yes 0 0 No -27 0.47 No 38 49.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69015221 + NM_133509 RAD51B 0 . . . 6.82 88.7 13 4.21 No 62 0.31 No 0 0 No -22 0.69 Yes 51 70.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108240934 + NM_000051 ATM 0 . . . 6.79 80.14 23 3.81 No 20 1.07 Yes 0 0 No -23 0.66 No 38 88.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215645113 - NM_000465 BARD1 0 . . . 0.17 83.43 19 4.69 No 59 0.4 No 0 0 No -26 0.49 No 46 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108204695 + NM_000051 ATM 0 . . . 1.91 64.02 15 4.36 No 63 -3.04 No 0 0 No -18 0.37 No 36 62.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47791041 + NM_000251 MSH2 0 . . . 4.71 86.61 23 4.73 No 11 0.6 No 0 0 No -23 0.43 No 47 82.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69014722 + NM_133509 RAD51B 0 . . . 1.17 63.31 23 6.43 Yes 65 0.09 No 0 0 No -22 0.82 Yes 43 29.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45794792 - NM_001048171 MUTYH 0 . . . 1.74 86.19 18 5.43 No 27 0.72 No 0 0 No -26 0.59 No 44 63.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32901986 + NM_000059 BRCA2 0 . . . 1.44 0 25 6.21 Yes 73 1.29 Yes 0 0 No -24 0.65 No 44 31.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68541582 + NM_133509 RAD51B 0 . . . 4.74 72.32 36 5.99 Yes 38 -2.24 No 0 0 No -29 0.84 Yes 52 75.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47769259 + NM_000251 MSH2 0 . . . 2.48 76.96 22 4.78 No 33 1.44 Yes 0 0 No -21 0.95 Yes 25 81.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59881157 - NM_032043 BRIP1 0 . . . 2.7 70.31 21 4.33 No 64 0.63 No 0 0 No -20 0.81 Yes 39 71.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47801808 + NM_000251 MSH2 0 . . . 2.84 73.69 17 5.29 No 70 1.28 Yes 0 0 No -24 0.25 No 51 33.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190668140 + NM_000534 PMS1 0 . . . 1.32 59.96 27 5.35 No 76 0.46 No 0 0 No -31 0.78 Yes 50 43.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94172183 - NM_005591 MRE11 0 . . . 3.77 80.94 43 4.48 No 12 0.42 No 0 0 No -53 0.59 No 46 82.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108181516 + NM_000051 ATM 0 . . . 3.31 62.22 13 3.87 No 11 1.14 Yes 0 0 No -29 0.91 Yes 43 68.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47702044 + NM_000251 MSH2 0 . . . 2.13 75.62 60 8.55 Yes 13 1.83 Yes 0 0 No -31 0.77 Yes 45 89.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47717655 + NM_000251 MSH2 0 . . . 0.99 74.73 29 5.55 No 33 0.89 Yes 0 0 No -32 0.44 No 56 34.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41010918 + NM_001164269 RAD51 0 . . . 1.81 83.39 23 5.38 No 14 0.53 No 0 0 No -25 0.78 Yes 37 86.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32929188 + NM_000059 BRCA2 0 . . . 2.2 89.33 14 4.47 No 15 -2.07 No 0 0 No -48 0.8 Yes 51 31.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105176366 + NM_021930 RINT1 0 . . . 4.39 69.6 14 4.59 No 65 -2.43 No 0 0 No -58 0.53 No 44 69.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47675424 + NM_000251 MSH2 0 . . . 2.94 77.82 24 6.83 Yes 21 0.24 No 0 0 No -23 0.93 Yes 48 52.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69039918 + NM_133509 RAD51B 0 . . . 0.29 0 21 4.42 No 12 1.66 Yes 0 0 No -23 0.75 Yes 46 65.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131928628 + NM_005732 RAD50 0 . . . 6 89.51 27 5.39 No 4 1 Yes 0 0 No -33 0.41 No 54 52.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108096903 + NM_000051 ATM 0 . . . 4.85 68.64 15 4.58 No 46 0.67 No 0 0 No -57 0.88 Yes 16 47.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68830271 + NM_004360 CDH1 0 . . . 8.19 73.61 30 6.36 Yes 13 0.44 No 0 0 No -29 0.62 No 45 88.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59903115 - NM_032043 BRIP1 0 . . . 3.3 75.38 53 7.55 Yes 53 1.21 Yes 0 0 No -52 0.43 No 42 60.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68434083 + NM_133509 RAD51B 0 . . . 6.68 78.86 25 4.79 No 28 1.13 Yes 0 0 No -29 0.54 No 38 91.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41251239 - NM_007294 BRCA1 0 . . . 0.99 71.03 42 6.59 Yes 4 0 No 0 0 No -24 0.28 No 44 67.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68350616 + NM_133509 RAD51B 0 . . . 0.77 71.07 21 4.9 No 31 0.21 No 0 0 No -20 0.84 Yes 59 63.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59897522 - NM_032043 BRIP1 0 . . . 0.89 77.49 21 4.81 No 23 1.39 Yes 0 0 No -33 0.62 No 46 52.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69131251 + NM_133509 RAD51B 0 . . . 0.01 0 17 4.12 No 35 0.45 No 0 0 No -32 0.72 Yes 23 56.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152352903 - NM_005431 XRCC2 0 . . . 0.03 71.42 33 6.24 Yes 19 -3.37 No 0 0 No -32 0.9 Yes 19 67.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41240164 - NM_007294 BRCA1 0 . . . 5.74 88.26 21 5.79 Yes 3 0.63 No 0 0 No -20 0.84 Yes 49 69.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48032302 + NM_000179 MSH6 0 . . . 3.3 75.56 29 7.35 Yes 33 1.15 Yes 0 0 No -28 0.96 Yes 46 54.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68810505 + NM_133509 RAD51B 0 . . . 3.58 84.32 16 5.24 No 53 -3.36 No 0 0 No -21 0.52 No 53 27.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89633973 + NM_000314 PTEN 0 . . . 0.96 65.63 53 7.27 Yes 72 -5.75 No 0 0 No -23 0.75 Yes 49 65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29125429 - NM_001005735 CHEK2 0 . . . 5.22 86.31 19 6.37 Yes 8 1.14 Yes 0 0 No -18 0.64 No 50 93.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68836937 + NM_004360 CDH1 0 . . . 0.69 73.98 51 7.76 Yes 67 -2.03 No 0 0 No -26 0.53 No 52 59.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89726337 + NM_000314 PTEN 0 . . . 2.08 76.72 42 7.18 Yes 15 0.46 No 0 0 No -41 0.48 No 50 86.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131907381 + NM_005732 RAD50 0 . . . 2.16 76.63 21 5.66 Yes 15 0.67 No 0 0 No -20 0.56 No 39 84.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32909232 + NM_000059 BRCA2 0 . . . 0.61 74.47 18 4.58 No 4 0.41 No 0 0 No -17 0.73 Yes 54 77.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89631441 + NM_000314 PTEN 0 . . . 4.85 86.43 28 4.35 No 12 1.32 Yes 0 0 No -28 0.43 No 46 93.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68324015 + NM_133509 RAD51B 0 . . . 1.51 70.52 23 4.62 No 71 -3.66 No 0 0 No -23 0.63 No 47 30.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68885063 + NM_133509 RAD51B 0 . . . 5.79 84.4 25 4.81 No -2 1.16 Yes 0 0 No -24 0.73 Yes 18 76.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56803601 + NM_058216 RAD51C 0 . . . 6.98 82.37 28 5.29 No -1 0.48 No 0 0 No -27 0.93 Yes 47 53.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32954510 + NM_000059 BRCA2 0 . . . 7.59 78.7 63 7.57 Yes 73 1.14 Yes 0 0 No -25 0.74 Yes 42 88.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41229495 - NM_007294 BRCA1 0 . . . 0.42 67.82 19 5.84 Yes 52 0.37 No 0 0 No -59 0.22 No 52 46.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68545690 + NM_133509 RAD51B 0 . . . 0.66 61.32 20 5 No 20 0.19 No 0 0 No -20 0.82 Yes 43 67.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68465468 + NM_133509 RAD51B 0 . . . 1.51 0 13 4.36 No 39 0.25 No 0 0 No -21 0.8 Yes 28 69.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69092400 + NM_133509 RAD51B 0 . . . 5.24 72.35 28 5.04 No 14 2.13 Yes 0 0 No -51 0.45 No 44 86.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69126081 + NM_133509 RAD51B 0 . . . 7.12 74.68 16 4.66 No 13 1.01 Yes 0 0 No -50 0.72 Yes 45 74.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68619528 + NM_133509 RAD51B 0 . . . 7.31 83.12 14 4.47 No 62 -0.3 No 0 0 No -23 0.9 Yes 37 88.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68495919 + NM_133509 RAD51B 0 . . . 7.15 82.5 18 4.74 No 71 0.98 Yes 0 0 No -22 0.55 No 46 47.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68393826 + NM_133509 RAD51B 0 . . . 8.09 81.4 16 6.86 Yes 73 0.6 No 0 0 No -26 0.36 No 49 49.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59902727 - NM_032043 BRIP1 0 . . . 3.51 80.57 21 5.09 No 50 1.2 Yes 0 0 No -20 0.55 No 23 72.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68625305 + NM_133509 RAD51B 0 . . . 4.88 73.02 22 4.13 No 4 0.85 Yes 0 0 No -31 0.59 No 36 47.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32897741 + NM_000059 BRCA2 0 . . . 2.05 67.52 22 5.92 Yes 23 0.09 No 0 0 No -21 0.91 Yes 35 51.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68504039 + NM_133509 RAD51B 0 . . . 2.81 68.95 12 4.24 No 16 1.5 Yes 0 0 No -30 0.87 Yes 42 92.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69045644 + NM_133509 RAD51B 0 . . . 7.01 82.76 21 7.21 Yes 67 0.12 No 0 0 No -20 0.81 Yes 49 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40996744 + NM_001164269 RAD51 0 . . . 3.79 80.12 29 5.63 Yes 74 0.06 No 0 0 No -28 0.84 Yes 46 63.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131907032 + NM_005732 RAD50 0 . . . 3 73.42 20 3.96 No 52 -3.82 No 0 0 No -19 0.83 Yes 46 62.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68349580 + NM_133509 RAD51B 0 . . . 2.59 88.98 10 3.17 No 75 1.51 Yes 0 0 No -34 0.43 No 50 61.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108153775 + NM_000051 ATM 0 . . . 0.64 0 35 6.09 Yes 6 -2.56 No 0 0 No -34 0.58 No 53 57.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108194827 + NM_000051 ATM 0 . . . 4.58 74.26 28 6.04 Yes 4 0.98 Yes 0 0 No -27 0.56 No 54 51.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68775413 + NM_004360 CDH1 0 . . . 0.73 0 22 4.19 No 7 0.51 No 0 0 No -21 0.78 Yes 42 53.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69117628 + NM_133509 RAD51B 0 . . . 1.14 75.15 32 5.74 Yes 1 0.25 No 0 0 No -28 0.49 No 57 35.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69014037 + NM_133509 RAD51B 0 . . . 4.35 79.5 28 6.13 Yes 34 1.7 Yes 0 0 No -27 0.75 Yes 36 79.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59874797 - NM_032043 BRIP1 0 . . . 2.63 73.49 34 5.64 Yes 76 0.4 No 0 0 No -33 0.5 No 45 64.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29119421 - NM_001005735 CHEK2 0 . . . 5.2 85.02 17 6.4 Yes 72 1.19 Yes 0 0 No -16 0.77 Yes 48 62.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29083431 - NM_001005735 CHEK2 0 . . . 4.32 83.34 36 6.16 Yes 13 1.54 Yes 0 0 No -35 0.61 No 45 86.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59916070 - NM_032043 BRIP1 0 . . . 7.55 76.25 30 5.95 Yes 69 1.95 Yes 0 0 No -29 0.73 Yes 42 96.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69096826 + NM_133509 RAD51B 0 . . . 4.75 94.14 16 5.74 Yes 63 0.65 No 0 0 No -27 0.31 No 49 51.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69121639 + NM_133509 RAD51B 0 . . . 0.36 65.65 22 5.1 No 48 1.18 Yes 0 0 No -24 0.65 No 40 37.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68560438 + NM_133509 RAD51B 0 . . . 3.94 70.18 18 5.48 No 76 1.02 Yes 0 0 No -21 0.48 No 23 75.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59931333 - NM_032043 BRIP1 0 . . . 1.34 0 60 6.54 Yes 71 0.81 Yes 0 0 No -26 0.47 No 51 66.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68869241 + NM_133509 RAD51B 0 . . . 0.99 74.3 26 5.39 No 39 1.51 Yes 0 0 No -25 0.85 Yes 37 32.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108205765 + NM_000051 ATM 0 . . . 1.4 89.22 28 6.48 Yes 63 -4.98 No 0 0 No -27 0.87 Yes 48 48.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68593342 + NM_133509 RAD51B 0 . . . 5.36 80.57 22 5.19 No 25 0.3 No 0 0 No -21 0.69 Yes 42 66.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68922598 + NM_133509 RAD51B 0 . . . 1.08 60.95 29 3.91 No 54 0.76 No 0 0 No -28 0.58 No 49 49.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274457 - NM_007294 BRCA1 0 . . . 1.31 75.4 31 4.42 No 33 1.06 Yes 0 0 No -30 0.81 Yes 13 52.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89710505 + NM_000314 PTEN 0 . . . 1.31 83.04 21 5 No 19 0.47 No 0 0 No -40 0.56 No 39 73.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68872662 + NM_133509 RAD51B 0 . . . 2.94 67.15 31 4.45 No 2 0.93 Yes 0 0 No -24 0.55 No 45 80.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45794007 - NM_001048171 MUTYH 0 . . . 5.25 81.14 25 7.26 Yes 51 0.61 No 0 0 No -20 0.64 No 50 86.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68733516 + NM_133509 RAD51B 0 . . . 5.47 73.61 30 5.09 No 65 1.94 Yes 0 0 No -29 0.8 Yes 47 82.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69081174 + NM_133509 RAD51B 0 . . . 2.98 69.68 24 5.9 Yes 34 0.41 No 0 0 No -23 0.77 Yes 39 96.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69047313 + NM_133509 RAD51B 0 . . . 1.19 0 31 6.08 Yes 1 1.14 Yes 0 0 No -35 0.69 Yes 21 51.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90981246 - NM_002485 NBN 0 . . . 13.11 99.37 45 7.14 Yes 21 1.59 Yes 0 0 No -23 0.51 No 37 92.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190732990 + NM_000534 PMS1 0 . . . 0.62 61.27 56 8.66 Yes 62 0.41 No 0 0 No -55 0.85 Yes 34 21.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59822503 - NM_032043 BRIP1 0 . . . 9.89 98.37 17 5.29 No 18 1.35 Yes 0 0 No -21 0.46 No 40 62.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69032169 + NM_133509 RAD51B 0 . . . 1.42 0 17 4.8 No 22 0.23 No 0 0 No -16 0.54 No 43 57.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37053675 + NM_000249 MLH1 0 . . . 3.85 68.03 38 5.1 No 62 0.9 Yes 0 0 No -25 0.44 No 36 51.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215646834 - NM_000465 BARD1 0 . . . 6.15 84.26 18 4.69 No 24 1.12 Yes 0 0 No -47 0.56 No 37 53.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41237945 - NM_007294 BRCA1 0 . . . 4.03 71.21 30 6.72 Yes 13 0.56 No 0 0 No -27 0.77 Yes 45 77.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59769081 - NM_032043 BRIP1 0 . . . 0.88 74.09 46 6.38 Yes 76 0.55 No 0 0 No -20 0.75 Yes 54 84.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37050550 + NM_000249 MLH1 0 . . . 4.37 77.06 29 7.14 Yes 69 -4.63 No 0 0 No -28 0.9 Yes 53 57.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68672569 + NM_133509 RAD51B 0 . . . 2.61 69.11 20 5 No 27 0.46 No 0 0 No -47 0.47 No 38 52.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68552760 + NM_133509 RAD51B 0 . . . 1.01 0 21 7.2 Yes 19 0.29 No 0 0 No -20 0.4 No 39 82.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89678394 + NM_000314 PTEN 0 . . . 1.37 71.29 18 5.92 Yes 10 0.03 No 0 0 No -22 0.61 No 48 83.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37038911 + NM_000249 MLH1 0 . . . 2.66 57.5 15 5.38 No 31 0.91 Yes 0 0 No -27 0.42 No 27 61.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68947057 + NM_133509 RAD51B 0 . . . 2.37 68.34 20 3.79 No 18 0.08 No 0 0 No -19 0.9 Yes 40 83.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68999892 + NM_133509 RAD51B 0 . . . 4.74 72.94 13 3.77 No 23 -2.94 No 0 0 No -18 0.32 No 39 95.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190703836 + NM_000534 PMS1 0 . . . 1.34 76.47 21 5.57 Yes 33 0.99 Yes 0 0 No -20 0.59 No 50 69.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69043088 + NM_133509 RAD51B 0 . . . 10.39 81.69 22 5.61 Yes 50 -2.45 No 0 0 No -21 0.86 Yes 47 58.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56810317 + NM_058216 RAD51C 0 . . . 5.56 72.5 33 7.14 Yes 13 0.91 Yes 0 0 No -32 0.8 Yes 45 74.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68829378 + NM_004360 CDH1 0 . . . 2.3 63.82 22 4.83 No 51 0.8 Yes 0 0 No -21 0.95 Yes 51 34.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68843047 + NM_004360 CDH1 0 . . . 1.09 77.79 31 6.15 Yes -4 1.48 Yes 0 0 No -26 0.51 No 62 44.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47696997 + NM_000251 MSH2 0 . . . 1.61 69.25 42 8.15 Yes 67 -4.97 No 0 0 No -31 0.49 No 50 69.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94164255 - NM_005591 MRE11 0 . . . 2.6 64.28 34 6.75 Yes 67 1.05 Yes 0 0 No -33 0.57 No 42 46.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69016662 + NM_133509 RAD51B 0 . . . 0.78 0 39 7.27 Yes 28 2.3 Yes 0 0 No -38 0.82 Yes 41 73.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89650492 + NM_000314 PTEN 0 . . . 4.39 84.41 28 6.41 Yes 9 0.47 No 0 0 No -27 0.82 Yes 49 66.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59859118 - NM_032043 BRIP1 0 . . . 3.6 85.02 34 5.03 No 4 1.2 Yes 0 0 No -28 0.66 No 45 66.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89683839 + NM_000314 PTEN 0 . . . 8.9 75.96 18 4.81 No 50 1.48 Yes 0 0 No -27 0.46 No 44 93.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94171892 - NM_005591 MRE11 0 . . . 0.73 64.54 29 6.55 Yes 1 0.84 Yes 0 0 No -28 0.82 Yes 57 58.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68666485 + NM_133509 RAD51B 0 . . . 4.38 66.87 15 5.66 Yes 17 1.16 Yes 0 0 No -19 0.39 No 41 95.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89669313 + NM_000314 PTEN 0 . . . 2.98 81.66 52 8.25 Yes 13 0.65 No 0 0 No -35 0.76 Yes 45 51.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152361674 - NM_005431 XRCC2 0 . . . 1.76 66.54 15 4.58 No 40 -2.58 No 0 0 No -26 0.49 No 47 29.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104163496 - NM_001100119 XRCC3 0 . . . 1.03 0 32 6.05 Yes 67 -2.94 No 0 0 No -31 0.68 Yes 42 33.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042610 - NM_000535 PMS2 0 . . . 4.08 67.5 16 4.47 No -1 0.36 No 0 0 No -15 0.25 No 47 62.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190647433 + NM_000534 PMS1 0 . . . 2.73 83.38 20 5.1 No 45 1.58 Yes 0 0 No -25 0.77 Yes 52 62.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6041310 - NM_000535 PMS2 0 . . . 2.26 70.54 30 5.74 Yes 72 0.79 Yes 0 0 No -23 0.65 No 49 74.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94221153 - NM_005591 MRE11 0 . . . 5.34 74.02 28 5.38 No 67 1.52 Yes 0 0 No -27 0.67 Yes 49 65.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68405328 + NM_133509 RAD51B 0 . . . 1.11 63.6 12 4.24 No 9 0.4 No 0 0 No -33 0.65 No 38 51.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645592 - NM_024675 PALB2 0 . . . 12.77 94.7 23 5.1 No -3 0.45 No 0 0 No -28 0.63 No 49 53.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32966452 + NM_000059 BRCA2 0 . . . 6.46 85.59 59 8.38 Yes 8 0.41 No 0 0 No -27 0.92 Yes 50 76.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68956611 + NM_133509 RAD51B 0 . . . 4.7 72.94 21 5.66 Yes 60 -3.83 No 0 0 No -20 0.72 Yes 44 36.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89708324 + NM_000314 PTEN 0 . . . 1.4 68.49 20 7.21 Yes 74 0.32 No 0 0 No -19 0.67 Yes 52 39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69013498 + NM_133509 RAD51B 0 . . . 0.47 61.09 31 6.19 Yes 35 -2.45 No 0 0 No -30 0.74 Yes 28 60.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47755827 + NM_000251 MSH2 0 . . . 2.76 78.07 20 5.1 No 53 0.83 Yes 0 0 No -19 0.45 No 44 65.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29100275 - NM_001005735 CHEK2 0 . . . 0.27 49.2 18 5.51 No 76 0.33 No 0 0 No -27 0.58 No 58 12.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75508353 - NM_001040108 MLH3 0 . . . 6.84 89.49 31 6.97 Yes 3 0.28 No 0 0 No -30 0.74 Yes 42 68.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215609679 - NM_000465 BARD1 0 . . . 4.53 70.36 32 5.83 Yes 8 0.82 Yes 0 0 No -29 0.89 Yes 50 70.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75499052 - NM_001040108 MLH3 0 . . . 2.78 67.18 15 4.58 No 48 0.22 No 0 0 No -26 0.34 No 38 80.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190717562 + NM_000534 PMS1 0 . . . 3.25 64.85 34 6.23 Yes 64 -3.6 No 0 0 No -33 0.87 Yes 37 31.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68293518 + NM_133509 RAD51B 0 . . . 4.92 80.65 31 6.37 Yes 8 0.66 No 0 0 No -30 0.7 Yes 50 86.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68645888 + NM_133509 RAD51B 0 . . . 5.94 87.49 27 5.2 No 70 1.28 Yes 0 0 No -45 0.57 No 46 59.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68496902 + NM_133509 RAD51B 0 . . . 2.46 73.66 26 4.93 No 51 -2.15 No 0 0 No -42 0.87 Yes 42 67.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59918688 - NM_032043 BRIP1 0 . . . 2.67 70.27 28 5.66 Yes 58 1.08 Yes 0 0 No -27 0.29 No 19 46.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108174260 + NM_000051 ATM 0 . . . 0.8 68.94 16 5.42 No -2 0.05 No 0 0 No -24 0.83 Yes 45 70.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69102474 + NM_133509 RAD51B 0 . . . 0.13 67.25 28 5.11 No 68 -5.52 No 0 0 No -27 0.96 Yes 53 54.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1222601 + NM_000455 STK11 0 . . . 6.03 75.35 77 7.2 Yes 64 -3.94 No 0 0 No -33 0.61 No 44 94.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68649130 + NM_133509 RAD51B 0 . . . 1.89 80.35 77 8.29 Yes 71 0.9 Yes 0 0 No -27 0.86 Yes 50 24.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90955919 - NM_002485 NBN 0 . . . 4.37 72.78 32 7.14 Yes 44 -4.93 No 0 0 No -31 0.48 No 53 53.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32913357 + NM_000059 BRCA2 0 . . . 0.93 69.05 17 5.17 No 55 0.44 No 0 0 No -24 0.17 No 45 50.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68494734 + NM_133509 RAD51B 0 . . . 6.42 80.14 17 5.57 Yes 66 0.23 No 0 0 No -16 0.74 Yes 42 67.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94166619 - NM_005591 MRE11 0 . . . 3.88 73.12 32 5.78 Yes -1 0.83 Yes 0 0 No -24 0.54 No 49 56.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68602361 + NM_133509 RAD51B 0 . . . 9.74 87.32 18 6.12 Yes 9 0.87 Yes 0 0 No -26 0.5 No 49 51.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47757208 + NM_000251 MSH2 0 . . . 4.29 73.12 30 4.48 No 70 1.11 Yes 0 0 No -23 0.78 Yes 46 83.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41001422 + NM_001164269 RAD51 0 . . . 5.18 78.58 23 4.75 No 55 0.34 No 0 0 No -22 0.67 Yes 45 59.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215597055 - NM_000465 BARD1 0 . . . 5.41 73.83 29 4.44 No 21 -2.55 No 0 0 No -26 0.59 No 41 94.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37087649 + NM_000249 MLH1 0 . . . 8.34 88.25 16 4.57 No 13 0.54 No 0 0 No -21 0.63 No 45 90.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68760817 + NM_133509 RAD51B 0 . . . 2.31 69.91 16 5.17 No 13 0.81 Yes 0 0 No -20 0.61 No 45 55.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68525684 + NM_133509 RAD51B 0 . . . 1.71 62.05 25 3.95 No 47 -3.98 No 0 0 No -22 0.83 Yes 52 35.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68784582 + NM_004360 CDH1 0 . . . 7.67 82.8 9 5.57 Yes 48 -4.99 No 0 0 No -24 0.78 Yes 49 74.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190672978 + NM_000534 PMS1 0 . . . 4.51 71.5 23 4.9 No 75 1.09 Yes 0 0 No -22 0.91 Yes 42 54.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23634153 - NM_024675 PALB2 0 . . . 4.91 65.71 17 5.13 No 49 0.83 Yes 0 0 No -20 0.6 No 42 33.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94179496 - NM_005591 MRE11 0 . . . 6.94 88.7 20 5.1 No 9 0.99 Yes 0 0 No -25 0.7 Yes 49 88.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59862759 - NM_032043 BRIP1 0 . . . 1.12 0 45 6.6 Yes 50 0.59 No 0 0 No -31 0.43 No 40 92.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89730422 + NM_000314 PTEN 0 . . . 2.12 74.93 22 4.73 No 63 -3.77 No 0 0 No -21 0.63 No 48 39.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89730744 + NM_000314 PTEN 0 . . . 0.65 68.18 17 4.79 No 18 1.19 Yes 0 0 No -25 0.61 No 40 45.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104166897 - NM_001100119 XRCC3 0 . . . 3.46 75.12 14 4.17 No 74 -5.72 No 0 0 No -54 0.34 No 50 90.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131905841 + NM_005732 RAD50 0 . . . 2.81 69.64 39 5.6 Yes 54 0.07 No 0 0 No -31 0.52 No 39 84.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84397967 - NM_139076 FAM175A 0 . . . 1.72 0 9 3.87 No 55 0.79 Yes 0 0 No -21 0.33 No 51 70.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56779649 + NM_058216 RAD51C 0 . . . 2.56 72.73 18 5.6 Yes 61 1.68 Yes 0 0 No -25 0.92 Yes 45 71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68794676 + NM_004360 CDH1 0 . . . 1.09 66.11 30 6.36 Yes 76 0.26 No 0 0 No -29 0.78 Yes 51 57.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75508525 - NM_001040108 MLH3 0 . . . 2.48 70.4 21 6.47 Yes -1 0.32 No 0 0 No -20 0.8 Yes 48 76.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47726137 + NM_000251 MSH2 0 . . . 1.64 67.36 27 5.39 No 33 1.16 Yes 0 0 No -26 0.8 Yes 25 45.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68752966 + NM_133509 RAD51B 0 . . . 6.01 75.61 20 4.88 No 13 0.52 No 0 0 No -40 0.61 No 50 67.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68802640 + NM_004360 CDH1 0 . . . 0.89 0 11 3.56 No 69 0.34 No 0 0 No -22 0.39 No 44 48.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7574280 - NM_000546 TP53 0 . . . 1.51 75.35 61 6.68 Yes 63 -5.17 No 0 0 No -23 0.38 No 48 32.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68870536 + NM_004360 CDH1 0 . . . 6.55 75.42 17 6.4 Yes 72 0.86 Yes 0 0 No -35 0.69 Yes 49 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84398784 - NM_139076 FAM175A 0 . . . 2.03 73.55 16 5.2 No 70 0.4 No 0 0 No -54 0.24 No 47 75.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68285221 + NM_133509 RAD51B 0 . . . 6.53 92.45 21 7.21 Yes 76 -3.12 No 0 0 No -29 0.57 No 52 47.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668118 - NM_000465 BARD1 0 . . . 2.8 84.53 21 5.04 No 59 0.85 Yes 0 0 No -45 0.51 No 46 49.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131950960 + NM_005732 RAD50 0 . . . 1.68 65.93 19 4.97 No 73 1.22 Yes 0 0 No -24 0.49 No 36 60.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190650202 + NM_000534 PMS1 0 . . . 1.46 67.13 19 4.8 No 22 0.6 No 0 0 No -18 0.73 Yes 44 50.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68616142 + NM_133509 RAD51B 0 . . . 1.41 78.49 22 4.79 No 47 0.63 No 0 0 No -21 0.88 Yes 47 87.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68812816 + NM_133509 RAD51B 0 . . . 4.99 75.72 33 7.06 Yes 55 -3.37 No 0 0 No -32 0.83 Yes 48 60.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190730597 + NM_000534 PMS1 0 . . . 5.17 86.54 21 5.17 No 0 0.31 No 0 0 No -20 0.8 Yes 47 47.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68618051 + NM_133509 RAD51B 0 . . . 4.17 82.65 30 6.19 Yes 63 1.27 Yes 0 0 No -27 0.56 No 44 40.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59773865 - NM_032043 BRIP1 0 . . . 5.97 75.72 12 4 No 6 1.08 Yes 0 0 No -33 0.56 No 34 87.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68634678 + NM_133509 RAD51B 0 . . . 0.87 0 16 4.12 No 34 1.01 Yes 0 0 No -31 0.61 No 36 52.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69119474 + NM_133509 RAD51B 0 . . . 8.43 71.93 33 5.01 No 24 0.58 No 0 0 No -25 0.7 Yes 30 42.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68415791 + NM_133509 RAD51B 0 . . . 5.95 67.37 23 5.39 No 28 0.31 No 0 0 No -22 0.58 No 27 55.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37052399 + NM_000249 MLH1 0 . . . 1.69 66.33 27 5.01 No 63 0.28 No 0 0 No -26 0.8 Yes 50 71.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68855883 + NM_133509 RAD51B 0 . . . 1.16 69.74 24 5.29 No 38 1.01 Yes 0 0 No -21 0.55 No 46 47.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47636817 + NM_000251 MSH2 0 . . . 1.1 83.06 38 8.06 Yes 74 1.68 Yes 0 0 No -37 0.77 Yes 49 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69067810 + NM_133509 RAD51B 0 . . . 0.89 0 29 5.56 Yes 45 -3.03 No 0 0 No -28 0.59 No 48 64.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68440244 + NM_133509 RAD51B 0 . . . 1.2 67.62 16 6 Yes 76 0.31 No 0 0 No -29 0.33 No 29 66.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56793006 + NM_058216 RAD51C 0 . . . 5.67 76.21 28 5.5 No 18 1.8 Yes 0 0 No -24 0.4 No 53 70.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75516683 - NM_001040108 MLH3 0 . . . 1.83 67.26 18 5.23 No 75 1.45 Yes 0 0 No -27 0.47 No 35 31.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59754681 - NM_032043 BRIP1 0 . . . 7.25 82.12 13 3.4 No 44 0.99 Yes 0 0 No -16 0.48 No 38 53.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37091506 + NM_000249 MLH1 0 . . . 1.04 66.93 17 4.61 No 74 0.26 No 0 0 No -26 0.39 No 50 75.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94151290 - NM_005591 MRE11 0 . . . 5.76 83.89 34 7.14 Yes 26 0.64 No 0 0 No -33 0.85 Yes 45 85.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48020443 + NM_000179 MSH6 0 . . . 1.67 66.07 22 4.51 No 70 -4.65 No 0 0 No -35 0.66 No 41 59.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59909238 - NM_032043 BRIP1 0 . . . 1.58 68 37 6.4 Yes 75 0.64 No 0 0 No -36 0.57 No 44 62.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47725292 + NM_000251 MSH2 0 . . . 5.26 82.88 31 5.74 Yes 26 1.89 Yes 0 0 No -30 0.94 Yes 32 46.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68807606 + NM_133509 RAD51B 0 . . . 3.76 81.56 22 4.8 No 72 1.46 Yes 0 0 No -21 0.97 Yes 50 40.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47790302 + NM_000251 MSH2 0 . . . 4.35 77.39 27 5.74 Yes 22 1.02 Yes 0 0 No -26 0.75 Yes 43 95.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68852276 + NM_004360 CDH1 0 . . . 9.39 86.49 10 4 No 34 1.08 Yes 0 0 No -26 0.94 Yes 49 46.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215604310 - NM_000465 BARD1 0 . . . 3.42 69.24 16 4.69 No 28 0.8 Yes 0 0 No -23 0.71 Yes 30 73.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84400392 - NM_139076 FAM175A 0 . . . 3.88 79.63 17 4.24 No 67 0.35 No 0 0 No -40 0.22 No 49 59.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68539227 + NM_133509 RAD51B 0 . . . 7.02 75.61 17 4.8 No 29 1.38 Yes 0 0 No -16 0.27 No 29 62.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68722155 + NM_133509 RAD51B 0 . . . 3.12 70.93 29 5.38 No 70 0.78 Yes 0 0 No -23 0.66 No 42 72.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59761728 - NM_032043 BRIP1 0 . . . 2.72 60.11 19 7.07 Yes 61 1.75 Yes 0 0 No -18 0.63 No 38 56.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68880127 + NM_133509 RAD51B 0 . . . 0.56 69.46 9 4.9 No 48 0.6 No 0 0 No -21 0.36 No 48 53.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7584371 - NM_000546 TP53 0 . . . 0.81 67.3 10 4.47 No 26 0.37 No 0 0 No -17 0.33 No 54 81.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41262900 - NM_007294 BRCA1 0 . . . 5.92 82.31 24 5.48 No 58 1.15 Yes 0 0 No -26 0.61 No 40 68.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56808130 + NM_058216 RAD51C 0 . . . 0.93 0 20 5.57 Yes 40 0.67 No 0 0 No -19 0.72 Yes 42 35.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68941718 + NM_133509 RAD51B 0 . . . 9.38 77.74 31 6.84 Yes 11 1.47 Yes 0 0 No -30 0.58 No 47 81.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32917824 + NM_000059 BRCA2 0 . . . 0.47 66.62 40 6.26 Yes 52 0.89 Yes 0 0 No -25 0.49 No 36 82.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41235066 - NM_007294 BRCA1 0 . . . 4.81 58.88 42 8.41 Yes 30 1.15 Yes 0 0 No -41 0.51 No 28 84.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41194718 - NM_007294 BRCA1 0 . . . 4.55 80.19 21 4.99 No 55 0.91 Yes 0 0 No -24 0.91 Yes 47 67.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59826153 - NM_032043 BRIP1 0 . . . 3.2 66.31 53 6.91 Yes 23 1.43 Yes 0 0 No -28 0.63 No 45 70.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108201734 + NM_000051 ATM 0 . . . 10.84 96.81 17 5.29 No 57 -4.21 No 0 0 No -21 0.63 No 48 68.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89633103 + NM_000314 PTEN 0 . . . 3.49 67.55 27 5.29 No 28 1.29 Yes 0 0 No -26 0.57 No 45 59.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215645280 - NM_000465 BARD1 0 . . . 0.44 0 36 5.46 No 71 0.4 No 0 0 No -28 0.49 No 49 53.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41201115 - NM_007294 BRCA1 0 . . . 1.52 72.91 38 4.38 No 41 0.31 No 0 0 No -23 0.73 Yes 44 58.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41221284 - NM_007294 BRCA1 0 . . . 2.47 81.35 21 6.12 Yes 1 0.36 No 0 0 No -20 0.95 Yes 52 55.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68656959 + NM_133509 RAD51B 0 . . . 5.43 77.03 22 6 Yes 14 0.52 No 0 0 No -21 0.47 No 44 60.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69085452 + NM_133509 RAD51B 0 . . . 1.15 0 26 5.66 Yes 12 1.97 Yes 0 0 No -25 0.38 No 46 82.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215592626 - NM_000465 BARD1 0 . . . 2.55 71.37 27 5.74 Yes 54 1.56 Yes 0 0 No -26 0.91 Yes 38 74.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131935603 + NM_005732 RAD50 0 . . . 7.95 72.37 48 8.73 Yes 11 0.89 Yes 0 0 No -22 0.81 Yes 47 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69015080 + NM_133509 RAD51B 0 . . . 4.83 80.45 29 5.22 No 71 1.23 Yes 0 0 No -28 0.43 No 44 83.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59871888 - NM_032043 BRIP1 0 . . . 2.95 68.13 25 6.78 Yes 24 1.55 Yes 0 0 No -27 0.65 No 17 96.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68962176 + NM_133509 RAD51B 0 . . . 0.37 76.07 14 3.62 No 65 -4.46 No 0 0 No -19 0.45 No 51 67.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59786201 - NM_032043 BRIP1 0 . . . 5.92 82.49 26 5.11 No 32 0.98 Yes 0 0 No -21 0.83 Yes 48 64.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68568057 + NM_133509 RAD51B 0 . . . 3.39 82.49 14 5.19 No 55 1.22 Yes 0 0 No -23 0.65 No 50 74.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190680813 + NM_000534 PMS1 0 . . . 1.88 0 15 4.58 No 9 1.23 Yes 0 0 No -36 0.68 Yes 49 72.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69101841 + NM_133509 RAD51B 0 . . . 2.27 0 23 6.32 Yes 38 1.84 Yes 0 0 No -22 0.95 Yes 20 82.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84381105 - NM_139076 FAM175A 0 . . . 1.63 72.87 30 4.97 No 4 0.9 Yes 0 0 No -21 0.53 No 51 52.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41244085 - NM_007294 BRCA1 0 . . . 1.94 66.88 26 5.65 Yes -3 0.54 No 0 0 No -25 0.78 Yes 49 60.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47676949 + NM_000251 MSH2 0 . . . 3.71 0 27 5.2 No 43 0.51 No 0 0 No -26 0.75 Yes 51 45.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59869724 - NM_032043 BRIP1 0 . . . 2.53 67.86 30 4.62 No 43 1.05 Yes 0 0 No -24 0.34 No 44 35.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68720110 + NM_133509 RAD51B 0 . . . 5.61 67.42 46 6.5 Yes 60 1.4 Yes 0 0 No -33 0.39 No 35 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108241525 + NM_000051 ATM 0 . . . 7.41 84.41 22 4.8 No 48 0.55 No 0 0 No -25 0.78 Yes 52 56.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68784395 + NM_133509 RAD51B 0 . . . 0.55 68.21 19 4.37 No 17 0.59 No 0 0 No -18 0.9 Yes 32 43.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59915002 - NM_032043 BRIP1 0 . . . 7.67 82.16 42 5.41 No 35 1.12 Yes 0 0 No -41 0.76 Yes 46 67.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32969087 + NM_000059 BRCA2 0 . . . 0.14 0 30 5.53 No 2 0.02 No 0 0 No -24 0.88 Yes 51 68.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47748174 + NM_000251 MSH2 0 . . . 7.32 76.35 26 5.08 No 29 -1.11 No 0 0 No -25 0.84 Yes 48 35.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52441942 - NM_004656 BAP1 0 . . . 6.49 77.9 12 4.09 No 22 0.19 No 0 0 No -58 0.39 No 47 89.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215634220 - NM_000465 BARD1 0 . . . 3.35 71.99 24 6.78 Yes 23 1.58 Yes 0 0 No -23 0.88 Yes 45 64.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190647924 + NM_000534 PMS1 0 . . . 5.94 67.58 24 3.99 No 20 0.86 Yes 0 0 No -23 0.38 No 38 75.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21980095 - NM_000077 CDKN2A 0 . . . 1.32 0 11 4.45 No 71 -3.2 No 0 0 No -20 0.4 No 41 91.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108206711 + NM_000051 ATM 0 . . . 4.3 74.43 10 4.83 No 8 1.12 Yes 0 0 No -24 0.33 No 42 88.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68522724 + NM_133509 RAD51B 0 . . . 0.93 70.27 45 6.37 Yes -2 0.99 Yes 0 0 No -23 0.67 Yes 47 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68534164 + NM_133509 RAD51B 0 . . . 0.47 64.93 23 5.29 No 70 -4.64 No 0 0 No -22 0.57 No 46 29.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68642913 + NM_133509 RAD51B 0 . . . 3.68 88.08 40 5.09 No 68 -3.55 No 0 0 No -26 0.46 No 50 49.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108169336 + NM_000051 ATM 0 . . . 7.49 88.99 22 4.9 No 35 1.05 Yes 0 0 No -21 0.96 Yes 51 70.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37045259 + NM_000249 MLH1 0 . . . 4.28 74.26 14 4.47 No 0 0.11 No 0 0 No -39 0.43 No 43 72.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69053980 + NM_133509 RAD51B 0 . . . 2.7 68.54 21 4.9 No 54 -1.38 No 0 0 No -20 0.67 Yes 48 86.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94223903 - NM_005591 MRE11 0 . . . 0.29 0 15 3.96 No 36 0.72 No 0 0 No -29 0.46 No 22 66.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6008892 - NM_000535 PMS2 0 . . . 1.1 61.62 31 5.41 No 12 0.43 No 0 0 No -30 0.6 No 46 73.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89700198 + NM_000314 PTEN 0 . . . 4.52 84.09 18 4.9 No 49 -2.54 No 0 0 No -24 0.45 No 46 74.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94190719 - NM_005591 MRE11 0 . . . 6.41 79.2 17 5.57 Yes 46 2.22 Yes 0 0 No -16 0.57 No 40 62.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68412398 + NM_133509 RAD51B 0 . . . 1.97 77.68 30 5.38 No 33 1.02 Yes 0 0 No -24 0.76 Yes 25 51.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68759616 + NM_133509 RAD51B 0 . . . 3.15 69.05 28 5.39 No 52 -3.88 No 0 0 No -27 0.66 Yes 42 55.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68841509 + NM_133509 RAD51B 0 . . . 8.12 87.37 23 5.75 Yes 15 0.49 No 0 0 No -22 0.8 Yes 43 65.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68633947 + NM_133509 RAD51B 0 . . . 7.53 71.27 11 5 No 1 1.3 Yes 0 0 No -18 0.39 No 38 48.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68871114 + NM_133509 RAD51B 0 . . . 3.31 77.91 41 7.35 Yes 30 1.34 Yes 0 0 No -22 0.58 No 47 43.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68781456 + NM_004360 CDH1 0 . . . 1.38 74.45 39 8.75 Yes 24 0.54 No 0 0 No -38 0.63 No 34 78.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68326632 + NM_133509 RAD51B 0 . . . 5.99 86.2 14 5.39 No 9 1.12 Yes 0 0 No -28 0.33 No 49 93.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215634721 - NM_000465 BARD1 0 . . . 2.43 70.28 52 5.95 Yes 25 0.94 Yes 0 0 No -28 0.76 Yes 44 82.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1207642 + NM_000455 STK11 0 . . . 0.82 71.57 20 6.08 Yes 72 0.12 No 0 0 No -19 0.74 Yes 30 34.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37055826 + NM_000249 MLH1 0 . . . 0.25 0 20 6.57 Yes 73 -3.54 No 0 0 No -26 0.55 No 60 49.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89679381 + NM_000314 PTEN 0 . . . 2.18 65.04 20 4.69 No 47 0.31 No 0 0 No -19 0.79 Yes 50 25.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68539275 + NM_133509 RAD51B 0 . . . 6.05 83.31 16 3.24 No 69 0.65 No 0 0 No -21 0.38 No 44 56.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94162526 - NM_005591 MRE11 0 . . . 6.11 82.69 15 5.28 No 54 0.64 No 0 0 No -36 0.52 No 45 70.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104167570 - NM_001100119 XRCC3 0 . . . 1.84 69.19 28 5.03 No 68 -1.32 No 0 0 No -28 0.59 No 49 49.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105173189 + NM_021930 RINT1 0 . . . 5.92 87.4 25 5.09 No 58 -3.24 No 0 0 No -24 0.39 No 52 53.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68405488 + NM_133509 RAD51B 0 . . . 2.31 78.27 10 3.99 No 5 0.72 No 0 0 No -55 0.33 No 53 70.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37081744 + NM_000249 MLH1 0 . . . 0.43 67.79 28 5.37 No 35 1.19 Yes 0 0 No -27 0.74 Yes 23 29.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215632843 - NM_000465 BARD1 0 . . . 1.16 64.77 20 5.48 No 72 0.59 No 0 0 No -19 0.87 Yes 38 59.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6019781 - NM_000535 PMS2 0 . . . 1.08 69.18 19 7.54 Yes 32 0.33 No 0 0 No -18 0.47 No 47 55.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94148532 - NM_005591 MRE11 0 . . . 3.17 76.32 30 6.04 Yes 75 1.13 Yes 0 0 No -29 0.68 Yes 49 84.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68357376 + NM_133509 RAD51B 0 . . . 4.89 87.73 15 5 No 67 -1.39 No 0 0 No -25 0.64 No 48 61.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59880751 - NM_032043 BRIP1 0 . . . 0.41 0 16 4.69 No 15 0.8 Yes 0 0 No -54 0.27 No 42 77.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215629155 - NM_000465 BARD1 0 . . . 2.51 83.68 27 5.66 Yes 43 0.29 No 0 0 No -25 0.45 No 43 65.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68923650 + NM_133509 RAD51B 0 . . . 1.78 81.8 18 4.76 No 53 2.04 Yes 0 0 No -17 0.52 No 11 7.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47696318 + NM_000251 MSH2 0 . . . 0.05 67.99 73 8.38 Yes 48 -1.92 No 0 0 No -24 0.26 No 39 62.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23617893 - NM_024675 PALB2 0 . . . 2.97 76.63 33 5.41 No 67 -4.97 No 0 0 No -26 0.63 No 43 52.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68500357 + NM_133509 RAD51B 0 . . . 3.46 68.97 23 4.9 No 10 1.32 Yes 0 0 No -22 0.87 Yes 44 93.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59822867 - NM_032043 BRIP1 0 . . . 1.69 67.29 23 5 No 22 -2.74 No 0 0 No -23 0.48 No 48 50.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68851893 + NM_004360 CDH1 0 . . . 1.08 71.56 23 5.31 No 14 0.45 No 0 0 No -28 0.82 Yes 44 66.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23647894 - NM_024675 PALB2 0 . . . 6.21 74.83 37 6.64 Yes 66 -4.47 No 0 0 No -32 0.92 Yes 45 69.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68656722 + NM_133509 RAD51B 0 . . . 3.99 77.16 28 3.89 No 5 0.2 No 0 0 No -26 0.53 No 42 59.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89638237 + NM_000314 PTEN 0 . . . 2.21 76.67 27 5.55 No 4 0.69 No 0 0 No -26 0.75 Yes 35 57.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68535608 + NM_133509 RAD51B 0 . . . 1.27 77.9 18 4.87 No 74 0.57 No 0 0 No -44 0.73 Yes 50 73.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90973509 - NM_002485 NBN 0 . . . 0.69 56.98 9 3.87 No 49 0.89 Yes 0 0 No -27 0.9 Yes 37 71.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90987427 - NM_002485 NBN 0 . . . 0.96 64.01 21 5.04 No 58 0.5 No 0 0 No -45 0.67 Yes 38 57.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37037416 + NM_000249 MLH1 0 . . . 1.02 68.36 28 7.14 Yes 16 1.28 Yes 0 0 No -27 0.69 Yes 42 91.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47706322 + NM_000251 MSH2 0 . . . 2.59 69.66 22 7.21 Yes 10 0.33 No 0 0 No -21 0.97 Yes 48 66.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68898472 + NM_133509 RAD51B 0 . . . 11.25 88.25 20 4.59 No 59 1.02 Yes 0 0 No -19 0.39 No 40 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68336781 + NM_133509 RAD51B 0 . . . 0.7 75.9 27 5.35 No 3 0.25 No 0 0 No -26 0.69 Yes 47 48.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68729489 + NM_133509 RAD51B 0 . . . 3.97 79.04 40 8.85 Yes 41 1.14 Yes 0 0 No -29 0.76 Yes 48 84.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68316741 + NM_133509 RAD51B 0 . . . 4.66 0 22 4.58 No 9 0.98 Yes 0 0 No -16 0.3 No 42 75.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69051268 + NM_133509 RAD51B 0 . . . 6.73 85.37 23 7.35 Yes 73 2.25 Yes 0 0 No -22 0.75 Yes 44 91.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37055437 + NM_000249 MLH1 0 . . . 7.97 82.61 21 5.56 Yes 3 1.72 Yes 0 0 No -24 0.62 No 43 84.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41013776 + NM_001164269 RAD51 0 . . . 6.2 82.31 53 7.27 Yes 62 -1.85 No 0 0 No -29 0.67 Yes 16 28.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47800779 + NM_000251 MSH2 0 . . . 0.48 0 18 4.45 No 34 1.87 Yes 0 0 No -21 0.73 Yes 24 54.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68801439 + NM_133509 RAD51B 0 . . . 2.38 60.84 18 5.74 Yes 34 0.57 No 0 0 No -26 0.21 No 61 38.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69130800 + NM_133509 RAD51B 0 . . . 2.5 79.7 21 4.76 No 36 0.31 No 0 0 No -20 0.95 Yes 28 90.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89675708 + NM_000314 PTEN 0 . . . 2.03 64.43 21 5.05 No -2 0.28 No 0 0 No -23 0.47 No 43 54.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1228863 + NM_000455 STK11 0 . . . 7.32 86.46 29 6.71 Yes 35 1 Yes 0 0 No -28 0.77 Yes 46 62.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68548698 + NM_133509 RAD51B 0 . . . 1.91 83.28 23 5.1 No 25 1.24 Yes 0 0 No -23 0.56 No 35 58.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68684902 + NM_133509 RAD51B 0 . . . 5.16 82.83 23 4.28 No 1 1.06 Yes 0 0 No -22 0.48 No 49 91.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68513900 + NM_133509 RAD51B 0 . . . 7.21 85.05 25 5.39 No 10 0.49 No 0 0 No -22 0.7 Yes 42 73.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33429747 - NM_002878 RAD51D 0 . . . 6.14 80.03 23 5.07 No 64 -1.61 No 0 0 No -22 0.56 No 41 62.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47688246 + NM_000251 MSH2 0 . . . 7.03 72.39 12 4.24 No 49 1.83 Yes 0 0 No -19 0.34 No 33 43.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59842844 - NM_032043 BRIP1 0 . . . 0.9 74.01 21 5.76 Yes 69 -3.94 No 0 0 No -20 0.82 Yes 54 41.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32887767 + NM_000059 BRCA2 0 . . . 2.95 70.85 24 5.26 No 23 1.58 Yes 0 0 No -23 0.62 No 40 69.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56770990 + NM_058216 RAD51C 0 . . . 3.38 77.52 30 5.57 Yes 12 0.54 No 0 0 No -29 0.59 No 46 91.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68545194 + NM_133509 RAD51B 0 . . . 2.66 64.78 35 5.24 No 66 0.73 No 0 0 No -23 0.71 Yes 40 47.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108228431 + NM_000051 ATM 0 . . . 3.29 77.09 24 5.38 No 59 2.1 Yes 0 0 No -23 0.6 No 54 47.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68354094 + NM_133509 RAD51B 0 . . . 2.11 67.92 20 5.18 No 48 0.59 No 0 0 No -49 0.55 No 42 61.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190682495 + NM_000534 PMS1 0 . . . 3.53 82.33 9 3.86 No 7 0.69 No 0 0 No -26 0.37 No 50 33.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6027493 - NM_000535 PMS2 0 . . . 2.54 77.12 18 5.35 No 33 1.17 Yes 0 0 No -22 0.56 No 48 45.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131899940 + NM_005732 RAD50 0 . . . 0.65 70.57 19 4.8 No 62 -3.89 No 0 0 No -24 0.5 No 47 55.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68491130 + NM_133509 RAD51B 0 . . . 2.6 80.15 18 5.37 No 40 1.26 Yes 0 0 No -45 0.4 No 51 41.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68388557 + NM_133509 RAD51B 0 . . . 8.13 70.62 35 5.82 Yes 10 -0.15 No 0 0 No -34 0.74 Yes 48 89.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47707565 + NM_000251 MSH2 0 . . . 0.28 0 24 6.01 Yes 72 1.31 Yes 0 0 No -23 0.68 Yes 47 53.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131934237 + NM_005732 RAD50 0 . . . 0.13 64.94 26 5.44 No 22 0.67 No 0 0 No -25 0.92 Yes 30 96.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68807107 + NM_133509 RAD51B 0 . . . 8.8 78.68 16 3.48 No 33 0.5 No 0 0 No -30 0.36 No 37 63.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37040901 + NM_000249 MLH1 0 . . . 1.46 67.5 20 4.8 No 60 -4.75 No 0 0 No -19 0.76 Yes 39 71.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94173481 - NM_005591 MRE11 0 . . . 1.59 64.4 24 4.9 No 11 1.42 Yes 0 0 No -23 0.7 Yes 43 53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47668411 + NM_000251 MSH2 0 . . . 0.19 0 17 5.9 Yes 25 1.47 Yes 0 0 No -28 0.73 Yes 33 82.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84399770 - NM_139076 FAM175A 0 . . . 7.26 88.78 20 5.1 No 2 1.5 Yes 0 0 No -19 0.36 No 49 91.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94208256 - NM_005591 MRE11 0 . . . 3.86 81.01 20 5.1 No 26 0.36 No 0 0 No -24 0.75 Yes 45 78.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68716286 + NM_133509 RAD51B 0 . . . 8.27 94.97 28 6.11 Yes 46 0.7 No 0 0 No -32 0.63 No 53 57.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21971924 - NM_000077 CDKN2A 0 . . . 3.61 71.07 9 3.87 No 16 0.61 No 0 0 No -32 0.38 No 42 62.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29134232 - NM_001005735 CHEK2 0 . . . 5.16 72.46 22 7.27 Yes 22 0.16 No 0 0 No -21 0.87 Yes 36 93.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68928373 + NM_133509 RAD51B 0 . . . 8.03 84.19 18 3.52 No 64 0.48 No 0 0 No -26 0.75 Yes 37 69.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47714512 + NM_000251 MSH2 0 . . . 6.51 85.14 18 4.13 No 21 0.54 No 0 0 No -50 0.57 No 37 65.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7588774 - NM_000546 TP53 0 . . . 0.48 60.75 16 5.25 No 53 -2.18 No 0 0 No -54 0.48 No 50 18.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59815058 - NM_032043 BRIP1 0 . . . 0.74 68.11 32 6.47 Yes 74 -2.43 No 0 0 No -31 0.52 No 39 76.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89698107 + NM_000314 PTEN 0 . . . 5.33 73.56 26 5.79 Yes 73 0.38 No 0 0 No -25 0.6 No 50 76.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37085768 + NM_000249 MLH1 0 . . . 6.11 82.31 19 5.36 No 59 1.22 Yes 0 0 No -30 0.58 No 55 54.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68984979 + NM_133509 RAD51B 0 . . . 2.12 0 27 5.26 No 69 -2.23 No 0 0 No -55 0.18 No 41 68.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68342721 + NM_133509 RAD51B 0 . . . 0.71 0 23 5.87 Yes 35 0.58 No 0 0 No -22 0.52 No 48 76.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105201102 + NM_021930 RINT1 0 . . . 1.53 0 30 5.47 No 31 0.64 No 0 0 No -49 0.32 No 53 53.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68297929 + NM_133509 RAD51B 0 . . . 1.36 60.05 14 8.07 Yes 43 0.6 No 0 0 No -28 0.53 No 44 94.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94160227 - NM_005591 MRE11 0 . . . 2.45 82.92 28 4.68 No 33 1.16 Yes 0 0 No -24 0.53 No 25 88.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41233838 - NM_007294 BRCA1 0 . . . 0.32 56.68 71 8.64 Yes 21 -3.16 No 0 0 No -22 0.79 Yes 50 67.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68803970 + NM_133509 RAD51B 0 . . . 2.97 78.11 26 4.47 No 65 0.33 No 0 0 No -20 0.64 No 44 60.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131918139 + NM_005732 RAD50 0 . . . 6.53 80.91 21 5.45 No 14 1.2 Yes 0 0 No -25 0.54 No 44 84.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68782671 + NM_004360 CDH1 0 . . . 4.32 78.42 29 5.23 No 37 0.89 Yes 0 0 No -58 0.29 No 45 51.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94170549 - NM_005591 MRE11 0 . . . 10.37 81.14 21 4.24 No 5 0.74 No 0 0 No -20 0.42 No 40 58.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47738903 + NM_000251 MSH2 0 . . . 3.77 82.85 18 4.7 No 56 0.09 No 0 0 No -26 0.39 No 48 37.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69073052 + NM_133509 RAD51B 0 . . . 1.69 69.49 30 5.12 No 72 -4.16 No 0 0 No -18 0.42 No 44 63.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32933621 + NM_000059 BRCA2 0 . . . 0.13 61.66 40 6.3 Yes 29 1.18 Yes 0 0 No -20 0.64 No 26 63.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131937956 + NM_005732 RAD50 0 . . . 5.31 75.15 60 7.65 Yes 51 0.11 No 0 0 No -24 0.52 No 40 46.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108127270 + NM_000051 ATM 0 . . . 2.92 75.24 20 4.64 No 22 0.6 No 0 0 No -19 0.5 No 36 69.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131930762 + NM_005732 RAD50 0 . . . 7.69 90.49 22 4.69 No 11 0.25 No 0 0 No -21 0.86 Yes 47 73.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68837863 + NM_133509 RAD51B 0 . . . 8.27 82.68 12 4.04 No 45 0.18 No 0 0 No -25 0.63 No 42 68.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108166274 + NM_000051 ATM 0 . . . 2.53 74.46 29 5.22 No 26 -1.01 No 0 0 No -23 0.55 No 19 61.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68951606 + NM_133509 RAD51B 0 . . . 4.29 68.68 10 5.1 No 43 0.77 Yes 0 0 No -29 0.28 No 47 77.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32962849 + NM_000059 BRCA2 0 . . . 3 71.61 27 4.7 No 75 2.07 Yes 0 0 No -23 0.45 No 13 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23631147 - NM_024675 PALB2 0 . . . 1.27 76.63 10 4 No 67 -4.96 No 0 0 No -27 0.66 No 47 68.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108169489 + NM_000051 ATM 0 . . . 5.91 86.39 28 5.2 No 7 0.35 No 0 0 No -46 0.69 Yes 51 33.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68954489 + NM_133509 RAD51B 0 . . . 1.74 66.6 29 6.34 Yes 4 0.67 No 0 0 No -28 0.62 No 45 66.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68317504 + NM_133509 RAD51B 0 . . . 3.37 71.81 25 5.87 Yes 27 -2.81 No 0 0 No -24 0.42 No 53 36.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108232992 + NM_000051 ATM 0 . . . 2.71 76.12 20 7.76 Yes 47 -3.1 No 0 0 No -33 0.47 No 47 51.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89665353 + NM_000314 PTEN 0 . . . 0.78 84.22 56 7.44 Yes 33 0.44 No 0 0 No -36 0.41 No 50 47.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68634124 + NM_133509 RAD51B 0 . . . 4.53 76.87 30 5.15 No 35 1.68 Yes 0 0 No -29 0.58 No 41 66.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68456740 + NM_133509 RAD51B 0 . . . 3.03 0 38 6.48 Yes 22 1.41 Yes 0 0 No -35 0.69 Yes 36 77.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68309205 + NM_133509 RAD51B 0 . . . 7.02 86.31 40 7.47 Yes 5 1.84 Yes 0 0 No -39 0.57 No 45 85.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32914668 + NM_000059 BRCA2 0 . . . 7.22 75.03 24 7.73 Yes 14 0.74 No 0 0 No -23 0.36 No 49 67.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69039510 + NM_133509 RAD51B 0 . . . 3.26 71.2 84 7.64 Yes 17 2.41 Yes 0 0 No -25 0.41 No 41 90 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41209202 - NM_007294 BRCA1 0 . . . 7.32 80.25 40 5.55 No 14 0.91 Yes 0 0 No -19 0.66 No 44 67.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68487012 + NM_133509 RAD51B 0 . . . 7.34 83.48 52 5.46 No 8 1.26 Yes 0 0 No -21 0.26 No 50 92.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59850681 - NM_032043 BRIP1 0 . . . 3.44 73.78 17 5.48 No 74 0.35 No 0 0 No -27 0.56 No 51 62.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68424493 + NM_133509 RAD51B 0 . . . 5.06 83.56 23 5.62 Yes 15 0.2 No 0 0 No -31 0.38 No 43 41.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47739660 + NM_000251 MSH2 0 . . . 2.36 64.88 12 5.39 No 76 1.04 Yes 0 0 No -26 0.28 No 30 30.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68532506 + NM_133509 RAD51B 0 . . . 1.24 80.76 33 4.76 No 70 -2.63 No 0 0 No -30 0.72 Yes 53 47.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75511417 - NM_001040108 MLH3 0 . . . 7.2 88.65 22 3.85 No 63 1.13 Yes 0 0 No -21 0.36 No 49 61.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105191246 + NM_021930 RINT1 0 . . . 5.97 87.63 14 5.39 No 43 0.45 No 0 0 No -13 0.33 No 19 71.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190731992 + NM_000534 PMS1 0 . . . 3.89 75.61 33 6.24 Yes 6 0.82 Yes 0 0 No -32 0.71 Yes 52 52.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59786157 - NM_032043 BRIP1 0 . . . 0.75 62.45 17 5.56 Yes 24 1.73 Yes 0 0 No -16 0.36 No 42 51.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69084211 + NM_133509 RAD51B 0 . . . 0.5 63.31 21 7.93 Yes 63 0.88 Yes 0 0 No -20 0.91 Yes 38 94.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68783610 + NM_004360 CDH1 0 . . . 0.03 68.57 56 9.54 Yes 46 0.15 No 0 0 No -24 0.53 No 45 87.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131905653 + NM_005732 RAD50 0 . . . 2.52 70.91 33 7.34 Yes 69 -6.24 No 0 0 No -32 0.94 Yes 47 85.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90986266 - NM_002485 NBN 0 . . . 1.5 66.29 30 3.68 No 26 -1.84 No 0 0 No -24 0.32 No 47 57.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68752907 + NM_133509 RAD51B 0 . . . 10.37 77.07 14 4.47 No 33 0.86 Yes 0 0 No -24 0.31 No 30 82.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190699008 + NM_000534 PMS1 0 . . . 0.02 73.97 23 5.1 No 59 0.19 No 0 0 No -23 0.47 No 56 45.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69020097 + NM_133509 RAD51B 0 . . . 5.09 68.39 19 6.4 Yes 5 -0.9 No 0 0 No -35 0.72 Yes 39 51.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59761648 - NM_032043 BRIP1 0 . . . 3.33 79.26 18 4.9 No 3 0.49 No 0 0 No -17 0.61 No 48 78.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68932476 + NM_133509 RAD51B 0 . . . 1.45 71.02 18 4.9 No 70 -4.08 No 0 0 No -26 0.8 Yes 49 65.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68678777 + NM_133509 RAD51B 0 . . . 6.38 81.87 29 5.29 No 63 -3.31 No 0 0 No -21 0.8 Yes 40 54.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41263370 - NM_007294 BRCA1 0 . . . 2.24 80.12 18 5.28 No 7 1.16 Yes 0 0 No -17 0.78 Yes 51 84.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68825565 + NM_133509 RAD51B 0 . . . 0.66 59.73 35 5.45 No 70 -4 No 0 0 No -23 0.55 No 41 52.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68379732 + NM_133509 RAD51B 0 . . . 10.81 85.59 15 4.52 No 69 1.01 Yes 0 0 No -22 0.27 No 50 57.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59927120 - NM_032043 BRIP1 0 . . . 0.79 70.87 48 6.84 Yes 71 0.06 No 0 0 No -26 0.53 No 52 36.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47633274 + NM_000251 MSH2 0 . . . 1.92 0 9 3.87 No 52 0.93 Yes 0 0 No -34 0.57 No 37 95.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105174265 + NM_021930 RINT1 0 . . . 8.45 88.33 16 5.02 No 27 0.99 Yes 0 0 No -27 0.63 No 31 74.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131892985 + NM_005732 RAD50 0 . . . 6.02 87.2 21 5 No 61 1.13 Yes 0 0 No -40 0.39 No 47 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108164931 + NM_000051 ATM 0 . . . 1.52 71.46 25 5.57 Yes 6 0.95 Yes 0 0 No -24 0.77 Yes 52 57.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68457597 + NM_133509 RAD51B 0 . . . 6.82 83.69 19 6.56 Yes 68 -3.11 No 0 0 No -36 0.59 No 42 82.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56805943 + NM_058216 RAD51C 0 . . . 5.42 80.56 54 7.3 Yes 7 0.9 Yes 0 0 No -22 0.62 No 51 85.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131927467 + NM_005732 RAD50 0 . . . 7.63 81.31 40 3.74 No 0 0.15 No 0 0 No -23 0.58 No 47 47.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89663098 + NM_000314 PTEN 0 . . . 7.78 85.02 19 5 No 41 -2.84 No 0 0 No -18 0.69 Yes 46 71.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68702502 + NM_133509 RAD51B 0 . . . 1.09 68.19 11 4.69 No 35 0.41 No 0 0 No -28 0.72 Yes 48 81.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41266614 - NM_007294 BRCA1 0 . . . 2.7 79.4 41 5.5 No 60 1.03 Yes 0 0 No -25 0.73 Yes 45 67.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90985934 - NM_002485 NBN 0 . . . 3.84 74.21 27 5.65 Yes 68 1.79 Yes 0 0 No -26 0.83 Yes 48 76.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69033471 + NM_133509 RAD51B 0 . . . 0.71 0 12 4.24 No 8 0.67 No 0 0 No -29 0.36 No 31 89.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69087131 + NM_133509 RAD51B 0 . . . 5.44 0 29 5.29 No 45 2.14 Yes 0 0 No -28 0.55 No 42 48.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68381322 + NM_133509 RAD51B 0 . . . 6.15 71.17 19 7.07 Yes 28 0.4 No 0 0 No -18 0.58 No 40 89.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68868490 + NM_004360 CDH1 0 . . . 2.96 84.24 29 4.52 No 36 0.72 No 0 0 No -22 0.63 No 22 25.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68976381 + NM_133509 RAD51B 0 . . . 1.33 69.01 21 5.57 Yes 33 1.1 Yes 0 0 No -24 0.52 No 52 43.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190647121 + NM_000534 PMS1 0 . . . 2.64 66.84 20 5 No 46 1.69 Yes 0 0 No -25 0.55 No 53 65.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48009495 + NM_000179 MSH6 0 . . . 5.62 70.46 42 7.31 Yes 67 1.48 Yes 0 0 No -24 0.62 No 45 73.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56793217 + NM_058216 RAD51C 0 . . . 0.09 74.68 34 6.78 Yes 49 0.68 No 0 0 No -28 0.69 Yes 54 68.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68553003 + NM_133509 RAD51B 0 . . . 2.87 67.5 67 5.69 Yes NA NA NA 0 0 No -33 0.72 Yes 28 39.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68595868 + NM_133509 RAD51B 0 . . . 7.2 85.66 21 6.22 Yes 3 1.32 Yes 0 0 No -20 0.5 No 47 84.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68851414 + NM_004360 CDH1 0 . . . 0.26 74.6 11 5 No 25 0.45 No 0 0 No -43 0.63 No 19 73.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41016922 + NM_001164269 RAD51 0 . . . 3.61 84.17 20 5.09 No 51 1.74 Yes 0 0 No -19 0.56 No 15 59.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68289117 + NM_133509 RAD51B 0 . . . 2.31 78.29 27 7.14 Yes 74 0.66 No 0 0 No -26 0.35 No 49 81.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94158674 - NM_005591 MRE11 0 . . . 3.26 80.82 20 5.32 No 69 0.38 No 0 0 No -20 0.53 No 47 83.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94177210 - NM_005591 MRE11 0 . . . 1.38 67.29 29 5.24 No 49 0.32 No 0 0 No -32 0.9 Yes 27 29.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68746694 + NM_133509 RAD51B 0 . . . 4.09 70.83 25 4.97 No 40 0.73 No 0 0 No -24 0.82 Yes 37 79.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89681924 + NM_000314 PTEN 0 . . . 1.08 67.42 18 5.88 Yes 7 0.55 No 0 0 No -29 0.51 No 51 51.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215656530 - NM_000465 BARD1 0 . . . 5.3 79.12 33 6.13 Yes 57 1.12 Yes 0 0 No -32 0.67 Yes 48 50.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32953126 + NM_000059 BRCA2 0 . . . 0.92 63.79 26 5 No 45 0.61 No 0 0 No -25 0.51 No 37 36.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68332761 + NM_133509 RAD51B 0 . . . 1.44 64.99 18 5.37 No 69 0.23 No 0 0 No -31 0.46 No 50 72.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68449090 + NM_133509 RAD51B 0 . . . 1.69 56.94 16 5.23 No 36 0.1 No 0 0 No -27 0.24 No 46 43.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68786702 + NM_133509 RAD51B 0 . . . 5.09 88.61 33 8.17 Yes -1 0.34 No 0 0 No -32 0.82 Yes 55 35.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68847192 + NM_133509 RAD51B 0 . . . 9.22 91.26 49 6.5 Yes 12 0.29 No 0 0 No -21 0.49 No 46 77.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68305868 + NM_133509 RAD51B 0 . . . 5.21 82.85 58 7.89 Yes 1 0.84 Yes 0 0 No -29 0.74 Yes 50 96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59793252 - NM_032043 BRIP1 0 . . . 1.89 62.11 16 6.86 Yes 24 0.01 No 0 0 No -28 0.65 No 46 69.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32912017 + NM_000059 BRCA2 0 . . . 3.82 74.82 44 6.23 Yes 9 0.37 No 0 0 No -21 0.45 No 32 47.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68589341 + NM_133509 RAD51B 0 . . . 0.12 74.97 20 4.42 No 74 -2.7 No 0 0 No -23 0.76 Yes 53 42.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84382926 - NM_139076 FAM175A 0 . . . 2.75 60.38 22 3.55 No 27 1.22 Yes 0 0 No -21 0.65 No 47 62.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68717698 + NM_133509 RAD51B 0 . . . 0.88 0 14 5.1 No 62 -2.63 No 0 0 No -40 0.39 No 48 52.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68746876 + NM_133509 RAD51B 0 . . . 4.67 74.47 23 5.83 Yes NA NA NA 0 0 No -22 0.69 Yes 47 74.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29087810 - NM_001005735 CHEK2 0 . . . 9.27 85.93 15 5.1 No 37 0.46 No 0 0 No -31 0.58 No 26 46.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6024363 - NM_000535 PMS2 0 . . . 1.25 68.25 17 5.2 No 28 1.51 Yes 0 0 No -53 0.81 Yes 17 32.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68848061 + NM_133509 RAD51B 0 . . . 4.47 73.17 27 5.16 No 53 0.19 No 0 0 No -26 0.65 No 45 79.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94175266 - NM_005591 MRE11 0 . . . 1.72 0 23 5.22 No 9 0.36 No 0 0 No -22 0.79 Yes 32 70.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6027328 - NM_000535 PMS2 0 . . . 1.07 75.9 28 4.87 No 37 0.87 Yes 0 0 No -27 0.93 Yes 40 55.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68789198 + NM_133509 RAD51B 0 . . . 3.45 72.64 23 4.9 No 49 0.11 No 0 0 No -22 0.62 No 39 62.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89699265 + NM_000314 PTEN 0 . . . 2.24 80.12 19 6.48 Yes 7 1.16 Yes 0 0 No -18 0.75 Yes 51 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68379541 + NM_133509 RAD51B 0 . . . 1.41 84.22 37 6.16 Yes 76 1.48 Yes 0 0 No -36 0.88 Yes 50 57.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215637294 - NM_000465 BARD1 0 . . . 1.32 58.41 30 5.42 No 1 0.32 No 0 0 No -23 0.81 Yes 57 55.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108163731 + NM_000051 ATM 0 . . . 0.04 69.01 32 6.93 Yes 12 0.3 No 0 0 No -31 0.57 No 46 37.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215610278 - NM_000465 BARD1 0 . . . 0.19 71.51 22 4.89 No 18 0.73 No 0 0 No -21 0.69 Yes 31 63.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68399732 + NM_133509 RAD51B 0 . . . 3.98 84.47 22 6.08 Yes 15 0.12 No 0 0 No -21 0.87 Yes 43 33.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89674409 + NM_000314 PTEN 0 . . . 6.1 76.21 41 5.87 Yes 44 0.18 No 0 0 No -35 0.51 No 49 59.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68602144 + NM_133509 RAD51B 0 . . . 6.23 88.57 16 4.69 No 18 0.09 No 0 0 No -26 0.42 No 45 83.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32954282 + NM_000059 BRCA2 0 . . . 3.06 64 18 6.31 Yes 22 0.72 No 0 0 No -29 0.48 No 36 92.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68474743 + NM_133509 RAD51B 0 . . . 1.62 73.11 50 8 Yes 57 0.95 Yes 0 0 No -45 0.52 No 18 69.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68772312 + NM_004360 CDH1 0 . . . 2.55 73.62 28 5.08 No 52 -2.88 No 0 0 No -55 0.53 No 48 29.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68383223 + NM_133509 RAD51B 0 . . . 4.55 71.63 26 5.85 Yes 14 0.92 Yes 0 0 No -29 0.66 No 39 73.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68518300 + NM_133509 RAD51B 0 . . . 2.65 73.02 23 4.83 No 44 0.44 No 0 0 No -22 0.78 Yes 46 92.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75496021 - NM_001040108 MLH3 0 . . . 0.81 0 20 5.47 No 10 1.06 Yes 0 0 No -29 0.44 No 30 61.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7564406 - NM_000546 TP53 0 . . . 2.49 80.19 28 5.74 Yes 58 -3.88 No 0 0 No -27 0.75 Yes 48 82.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68458510 + NM_133509 RAD51B 0 . . . 1.15 66.18 25 4.35 No 69 -5.68 No 0 0 No -29 0.67 Yes 47 40.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68629020 + NM_133509 RAD51B 0 . . . 1.66 75.12 14 4.47 No 72 0.53 No 0 0 No -19 0.36 No 38 44.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32897473 + NM_000059 BRCA2 0 . . . 6.07 85.02 14 5.29 No 6 1.23 Yes 0 0 No -13 0.33 No 52 75.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68835820 + NM_004360 CDH1 0 . . . 0.24 74.13 24 4.9 No 51 0.42 No 0 0 No -23 0.69 Yes 41 77.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68825986 + NM_004360 CDH1 0 . . . 0.09 68.4 16 3.8 No 52 0.1 No 0 0 No -27 0.58 No 48 69.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190712462 + NM_000534 PMS1 0 . . . 6.97 89.59 28 5.81 Yes 64 1.61 Yes 0 0 No -28 0.59 No 28 47.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56784769 + NM_058216 RAD51C 0 . . . 4.6 80.03 18 4.9 No 56 0.63 No 0 0 No -17 0.53 No 35 68.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59859198 - NM_032043 BRIP1 0 . . . 0.81 65.88 46 5.8 Yes 16 0.95 Yes 0 0 No -36 0.68 Yes 42 85.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68690949 + NM_133509 RAD51B 0 . . . 0.82 79.19 46 5.13 No 47 0.77 No 0 0 No -24 0.37 No 29 76.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90962078 - NM_002485 NBN 0 . . . 0.07 0 29 5.39 No 4 0.39 No 0 0 No -19 0.4 No 38 70.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68442602 + NM_133509 RAD51B 0 . . . 4.76 79.86 29 5.14 No 76 -6.93 No 0 0 No -25 0.36 No 49 87.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23620103 - NM_024675 PALB2 0 . . . 1.2 68.19 25 5.15 No 53 -1.01 No 0 0 No -24 0.91 Yes 26 51.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94157420 - NM_005591 MRE11 0 . . . 0.04 76.64 34 6.37 Yes 65 -1.49 No 0 0 No -33 0.59 No 50 94.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190732394 + NM_000534 PMS1 0 . . . 4.25 81.4 12 4.9 No -1 0.65 No 0 0 No -25 0.59 No 51 41.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68785244 + NM_004360 CDH1 0 . . . 5.49 70.36 14 5.39 No 51 1.24 Yes 0 0 No -30 0.31 No 33 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21965945 - NM_000077 CDKN2A 0 . . . 5.01 76.84 27 5.2 No 25 0.68 No 0 0 No -26 0.33 No 33 92.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68399818 + NM_133509 RAD51B 0 . . . 1.86 68.88 68 5.86 Yes 66 0.66 No 0 0 No -24 0.37 No 44 57.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68485643 + NM_133509 RAD51B 0 . . . 4.69 83.94 24 4.46 No 41 1.38 Yes 0 0 No -23 0.77 Yes 39 39.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108109317 + NM_000051 ATM 0 . . . 0.63 66.91 22 5 No 31 0.87 Yes 0 0 No -21 0.91 Yes 27 90.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89728035 + NM_000314 PTEN 0 . . . 1.45 71.72 32 4.88 No 55 0.45 No 0 0 No -29 0.44 No 47 88.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59827667 - NM_032043 BRIP1 0 . . . 4.31 69.72 22 6.22 Yes 67 1.29 Yes 0 0 No -22 0.65 No 45 69.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131972930 + NM_005732 RAD50 0 . . . 4.68 75.08 25 5.22 No 72 -4.93 No 0 0 No -24 0.91 Yes 51 57.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215633654 - NM_000465 BARD1 0 . . . 3.01 75.62 27 5.79 Yes 9 1.06 Yes 0 0 No -26 0.8 Yes 49 89.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56771596 + NM_058216 RAD51C 0 . . . 7.23 80.18 25 4.9 No 39 -2.54 No 0 0 No -24 0.69 Yes 50 66.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68624462 + NM_133509 RAD51B 0 . . . 3.44 83.11 53 6.08 Yes 9 0.85 Yes 0 0 No -23 0.47 No 49 47.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68633387 + NM_133509 RAD51B 0 . . . 2.53 72.06 30 5.87 Yes 7 0.53 No 0 0 No -17 0.55 No 35 52.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47662391 + NM_000251 MSH2 0 . . . 6.81 88.74 31 6.55 Yes 10 1.13 Yes 0 0 No -30 0.44 No 48 95.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59882848 - NM_032043 BRIP1 0 . . . 4.11 73.65 14 5.36 No 21 1.5 Yes 0 0 No -22 0.39 No 44 91.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94207131 - NM_005591 MRE11 0 . . . 2.92 79.47 22 4.9 No 0 0.37 No 0 0 No -21 0.73 Yes 52 45.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68880757 + NM_133509 RAD51B 0 . . . 0.27 0 37 5.9 Yes 48 -1.76 No 0 0 No -31 0.56 No 32 47.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68739664 + NM_133509 RAD51B 0 . . . 3.15 68.34 30 5.39 No 13 1.17 Yes 0 0 No -22 0.49 No 37 66.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37039985 + NM_000249 MLH1 0 . . . 1.02 69.71 35 7.34 Yes 67 -5.81 No 0 0 No -34 0.89 Yes 50 32.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68986544 + NM_133509 RAD51B 0 . . . 4.77 91.72 10 5.39 No 54 -1.6 No 0 0 No -22 0.36 No 44 59.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69089753 + NM_133509 RAD51B 0 . . . 4.94 80.35 24 5.48 No 20 0.86 Yes 0 0 No -23 0.68 Yes 38 60.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84380215 - NM_139076 FAM175A 0 . . . 2.9 68.95 10 4 No 16 0.97 Yes 0 0 No -29 0.54 No 42 90.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68548010 + NM_133509 RAD51B 0 . . . 5.35 80.65 21 4.92 No 15 1.12 Yes 0 0 No -45 0.47 No 43 65.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68658610 + NM_133509 RAD51B 0 . . . 0.04 0 34 6.78 Yes 53 0.82 Yes 0 0 No -33 0.66 No 51 69.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90974071 - NM_002485 NBN 0 . . . 3.45 82.55 34 6.16 Yes 4 0.97 Yes 0 0 No -33 0.39 No 50 39.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37087842 + NM_000249 MLH1 0 . . . 4.12 86.61 28 5.83 Yes 62 1.22 Yes 0 0 No -27 0.86 Yes 46 61.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215623302 - NM_000465 BARD1 0 . . . 2.98 69.83 16 4.49 No 35 0.45 No 0 0 No -45 0.39 No 44 87.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68634800 + NM_133509 RAD51B 0 . . . 4.14 69.62 26 7.65 Yes 45 1.16 Yes 0 0 No -30 0.49 No 43 54.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108145116 + NM_000051 ATM 0 . . . 1.96 0 27 3.99 No 2 1.11 Yes 0 0 No -22 0.79 Yes 14 68.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6016411 - NM_000535 PMS2 0 . . . 3.79 70.57 27 5.89 Yes 43 -2.7 No 0 0 No -27 0.47 No 46 49.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68833884 + NM_004360 CDH1 0 . . . 2.1 76.63 27 5.74 Yes 55 -3.68 No 0 0 No -26 0.55 No 43 55.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89628714 + NM_000314 PTEN 0 . . . 7.37 73.85 33 5.74 Yes 1 1.39 Yes 0 0 No -32 0.85 Yes 50 64.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41019370 + NM_001164269 RAD51 0 . . . 2.68 79.24 28 5.2 No 63 1.03 Yes 0 0 No -27 0.81 Yes 13 61.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59893167 - NM_032043 BRIP1 0 . . . 5.68 78.48 13 4.79 No 18 0.7 No 0 0 No -16 0.54 No 40 50 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32974814 + NM_000059 BRCA2 0 . . . 1.75 70.27 20 6.86 Yes 66 -5.01 No 0 0 No -19 0.67 Yes 46 69.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6012122 - NM_000535 PMS2 0 . . . 8.56 93.86 24 4.84 No 3 0.63 No 0 0 No -27 0.64 No 47 67.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190706280 + NM_000534 PMS1 0 . . . 4.03 67.4 30 5.95 Yes -3 0.77 Yes 0 0 No -29 0.81 Yes 48 78.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108192734 + NM_000051 ATM 0 . . . 6.31 76.6 19 6.23 Yes 2 1.21 Yes 0 0 No -26 0.58 No 45 46.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94183718 - NM_005591 MRE11 0 . . . 0.39 60.68 21 5.8 Yes 59 0.83 Yes 0 0 No -20 0.64 No 42 72.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68867735 + NM_004360 CDH1 0 . . . 1.54 0 20 6.16 Yes 15 0.13 No 0 0 No -19 0.47 No 43 61.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37071399 + NM_000249 MLH1 0 . . . 1.95 74 18 3.63 No 37 1.23 Yes 0 0 No -22 0.28 No 39 31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105195122 + NM_021930 RINT1 0 . . . 3.9 75.54 19 4.54 No 58 1.03 Yes 0 0 No -21 0.54 No 48 56.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69051890 + NM_133509 RAD51B 0 . . . 4.73 76.43 32 5.66 Yes 74 -0.2 No 0 0 No -60 0.38 No 45 67.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68664533 + NM_133509 RAD51B 0 . . . 5.37 76.37 29 5.48 No 29 1.31 Yes 0 0 No -28 0.45 No 44 69.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68913180 + NM_133509 RAD51B 0 . . . 1.52 73.7 33 5.63 Yes 68 1.42 Yes 0 0 No -32 0.96 Yes 34 48.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75485811 - NM_001040108 MLH3 0 . . . 0.94 79.26 27 4.44 No 71 0.62 No 0 0 No -26 0.58 No 51 29.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48014603 + NM_000179 MSH6 0 . . . 2.61 73.03 15 3.99 No 53 -2.12 No 0 0 No -25 0.47 No 41 58.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68673693 + NM_133509 RAD51B 0 . . . 3.61 79.69 10 4 No 9 1.23 Yes 0 0 No -39 0.37 No 49 88.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68781512 + NM_004360 CDH1 0 . . . 9.74 87.97 53 8.61 Yes 50 1.09 Yes 0 0 No -23 0.73 Yes 44 89.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68316831 + NM_133509 RAD51B 0 . . . 0.63 80.65 32 6.04 Yes 72 1.5 Yes 0 0 No -31 0.8 Yes 50 75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190691288 + NM_000534 PMS1 0 . . . 2.13 70.87 35 6.4 Yes 61 0.8 Yes 0 0 No -34 0.9 Yes 48 51.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23628964 - NM_024675 PALB2 0 . . . 0.24 80.65 19 5.26 No 33 1.09 Yes 0 0 No -18 0.53 No 50 78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47737554 + NM_000251 MSH2 0 . . . 3.94 76.34 14 3.39 No 62 0.65 No 0 0 No -17 0.73 Yes 41 58.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68334886 + NM_133509 RAD51B 0 . . . 1.59 79.97 18 4.36 No 9 0.64 No 0 0 No -30 0.41 No 49 58.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41013999 + NM_001164269 RAD51 0 . . . 0.04 62.83 19 6.33 Yes 22 0.08 No 0 0 No -23 0.63 No 36 50.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105176736 + NM_021930 RINT1 0 . . . 1.4 0 23 6.48 Yes 45 1.12 Yes 0 0 No -22 0.57 No 13 56.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131972611 + NM_005732 RAD50 0 . . . 3.81 78.19 12 4 No 41 -3.41 No 0 0 No -23 0.74 Yes 53 57.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41019481 + NM_001164269 RAD51 0 . . . 3.92 77.43 19 7.36 Yes 76 0.41 No 0 0 No -22 0.41 No 44 82.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32908564 + NM_000059 BRCA2 0 . . . 0.78 67.3 24 4.37 No 57 0.33 No 0 0 No -23 0.62 No 46 70.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47752136 + NM_000251 MSH2 0 . . . 4.73 72.21 47 6.6 Yes 41 0.4 No 0 0 No -46 0.65 No 40 85.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32939461 + NM_000059 BRCA2 0 . . . 6.52 91.63 17 4.69 No 66 1.66 Yes 0 0 No -17 0.42 No 39 59.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68952813 + NM_133509 RAD51B 0 . . . 6.12 76.42 14 5 No 69 0.28 No 0 0 No -21 0.54 No 48 76.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94155213 - NM_005591 MRE11 0 . . . 4.51 74.49 17 4.79 No 32 1.85 Yes 0 0 No -16 0.4 No 39 72.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47633510 + NM_000251 MSH2 0 . . . 6.22 71.54 20 4.58 No 21 1.09 Yes 0 0 No -19 0.94 Yes 37 69.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37044367 + NM_000249 MLH1 0 . . . 1.96 0 29 5.29 No 30 0.79 Yes 0 0 No -28 0.63 No 22 23.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68488392 + NM_133509 RAD51B 0 . . . 1.27 76.32 20 5.43 No 65 1.71 Yes 0 0 No -28 0.73 Yes 38 53.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68901966 + NM_133509 RAD51B 0 . . . 4.38 68.71 17 6.47 Yes 19 1.09 Yes 0 0 No -39 0.38 No 39 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47791124 + NM_000251 MSH2 0 . . . 5.73 87.54 19 4.67 No 73 -3.09 No 0 0 No -18 0.9 Yes 50 51.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68821361 + NM_004360 CDH1 0 . . . 1.68 62.41 15 3.99 No -2 0.4 No 0 0 No -14 0.27 No 41 56.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32951216 + NM_000059 BRCA2 0 . . . 4.53 74.21 32 5.57 Yes 59 -2.97 No 0 0 No -27 0.35 No 35 35.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29099852 - NM_001005735 CHEK2 0 . . . 3.78 64.68 15 6.16 Yes 53 0.88 Yes 0 0 No -32 0.38 No 49 80.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68939521 + NM_133509 RAD51B 0 . . . 3.05 69.11 35 6.22 Yes 53 -0.76 No 0 0 No -29 0.41 No 39 54.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68618911 + NM_133509 RAD51B 0 . . . 1.32 71.5 27 4.14 No 24 0.8 Yes 0 0 No -26 0.93 Yes 47 57.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68999544 + NM_133509 RAD51B 0 . . . 1.81 67.1 16 4.58 No 44 0.06 No 0 0 No -23 0.64 No 45 66.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69032886 + NM_133509 RAD51B 0 . . . 1.85 0 23 5.2 No 38 1.2 Yes 0 0 No -20 0.45 No 48 71.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190663648 + NM_000534 PMS1 0 . . . 5.16 81.21 29 6.43 Yes 25 -1.37 No 0 0 No -28 0.91 Yes 49 77.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68787002 + NM_004360 CDH1 0 . . . 0.09 74.68 42 6.23 Yes 4 0.41 No 0 0 No -29 0.53 No 54 83.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68646027 + NM_133509 RAD51B 0 . . . 3.5 78.61 19 5.74 Yes 26 0.33 No 0 0 No -23 0.84 Yes 39 55.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190714939 + NM_000534 PMS1 0 . . . 0.66 57.86 23 5.92 Yes -4 0.28 No 0 0 No -29 0.57 No 38 85.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68311259 + NM_133509 RAD51B 0 . . . 5.98 75.85 19 5.7 Yes 72 1.24 Yes 0 0 No -25 0.42 No 33 72.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68978352 + NM_133509 RAD51B 0 . . . 0.38 77.94 33 6.08 Yes 36 1.37 Yes 0 0 No -32 0.74 Yes 14 32.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59916387 - NM_032043 BRIP1 0 . . . 5 67.04 37 7.55 Yes -1 1.35 Yes 0 0 No -36 0.79 Yes 41 69.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89697395 + NM_000314 PTEN 0 . . . 13.07 100 26 5.09 No 60 -3.58 No 0 0 No -25 0.78 Yes 39 72.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84404796 - NM_139076 FAM175A 0 . . . 3.45 73.15 18 4.9 No 53 1.05 Yes 0 0 No -17 0.63 No 48 40.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29127483 - NM_001005735 CHEK2 0 . . . 2.38 84.22 13 5.19 No 76 1.46 Yes 0 0 No -27 0.21 No 50 52.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68791173 + NM_004360 CDH1 0 . . . 3.6 85.02 26 6.4 Yes 4 1.2 Yes 0 0 No -25 0.67 Yes 43 64.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47795464 + NM_000251 MSH2 0 . . . 0.1 48.32 32 5.64 Yes 53 0.62 No 0 0 No -31 0.4 No 47 56.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215672888 - NM_000465 BARD1 0 . . . 5.63 71.34 28 4.99 No 21 1.75 Yes 0 0 No -27 0.93 Yes 37 79.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47652895 + NM_000251 MSH2 0 . . . 2.58 66.89 27 5.2 No 3 -0.93 No 0 0 No -26 0.79 Yes 55 70.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41255320 - NM_007294 BRCA1 0 . . . 1.92 80.09 26 3.87 No 4 1.06 Yes 0 0 No -25 0.81 Yes 54 65.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68824923 + NM_004360 CDH1 0 . . . 5.52 80.47 18 5.91 Yes 59 0.77 Yes 0 0 No -31 0.46 No 48 37.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75511442 - NM_001040108 MLH3 0 . . . 7.15 80.85 26 5.51 No 38 1.13 Yes 0 0 No -25 0.65 No 45 66.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131916376 + NM_005732 RAD50 0 . . . 0.16 63.56 22 5.29 No -3 0.02 No 0 0 No -21 0.86 Yes 33 39.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32909141 + NM_000059 BRCA2 0 . . . 2.69 71.19 28 5.38 No -3 0.14 No 0 0 No -27 0.56 No 49 69.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69094942 + NM_133509 RAD51B 0 . . . 7.58 78.91 29 5.35 No 73 0.76 No 0 0 No -28 0.89 Yes 30 79.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108177548 + NM_000051 ATM 0 . . . 7.74 81.76 17 4.8 No 72 0.95 Yes 0 0 No -34 0.54 No 47 70.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47711212 + NM_000251 MSH2 0 . . . 0.06 68.22 21 5.2 No 51 0.76 No 0 0 No -20 0.61 No 32 71.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68616732 + NM_133509 RAD51B 0 . . . 0.09 71.74 20 5.1 No 29 0.78 Yes 0 0 No -19 0.79 Yes 29 63.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41262410 - NM_007294 BRCA1 0 . . . 4.78 84.6 23 4.69 No 33 0.77 No 0 0 No -22 0.72 Yes 20 68.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90980293 - NM_002485 NBN 0 . . . 2.68 79.24 40 6.48 Yes 33 1.44 Yes 0 0 No -39 0.57 No 25 52.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47705728 + NM_000251 MSH2 0 . . . 0.59 70.33 16 5.53 No 19 0.87 Yes 0 0 No -24 0.9 Yes 50 64.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40992952 + NM_001164269 RAD51 0 . . . 4.41 73.45 16 5.23 No 48 0.76 No 0 0 No -27 0.22 No 34 87.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59872020 - NM_032043 BRIP1 0 . . . 0.25 74.75 20 4.57 No 56 1.11 Yes 0 0 No -19 0.81 Yes 28 41.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104172527 - NM_001100119 XRCC3 0 . . . 3.18 0 27 5.39 No 22 1.44 Yes 0 0 No -26 0.76 Yes 51 33.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190715528 + NM_000534 PMS1 0 . . . 2.23 79.84 27 5.03 No 50 -4.03 No 0 0 No -26 0.91 Yes 39 55.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68490369 + NM_133509 RAD51B 0 . . . 0.72 81.23 26 5.22 No 17 1.89 Yes 0 0 No -25 0.44 No 41 95.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37057607 + NM_000249 MLH1 0 . . . 6.84 85.59 31 5.57 Yes 6 0.96 Yes 0 0 No -30 0.49 No 52 40.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29132925 - NM_001005735 CHEK2 0 . . . 3.01 0 26 6.08 Yes 46 0.35 No 0 0 No -25 0.96 Yes 35 70.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68293898 + NM_133509 RAD51B 0 . . . 4.95 68.22 26 4.91 No 63 0.71 No 0 0 No -25 0.77 Yes 42 42.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47709576 + NM_000251 MSH2 0 . . . 7.25 85.31 41 7.35 Yes -3 0.48 No 0 0 No -24 0.85 Yes 44 83.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47770849 + NM_000251 MSH2 0 . . . 0.49 77.9 19 4.24 No 18 -3.08 No 0 0 No -26 0.6 No 49 53.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68907531 + NM_133509 RAD51B 0 . . . 2.11 69.47 18 4.9 No 23 1.37 Yes 0 0 No -17 0.71 Yes 35 61.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21989222 - NM_000077 CDKN2A 0 . . . 5.06 77.19 28 5.43 No -1 1.01 Yes 0 0 No -27 0.8 Yes 50 66.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68580619 + NM_133509 RAD51B 0 . . . 1.48 70.76 23 5.37 No 14 0.41 No 0 0 No -25 0.4 No 44 78.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215654851 - NM_000465 BARD1 0 . . . 0.35 0 15 5.19 No 65 0.95 Yes 0 0 No -26 0.57 No 52 53.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215646363 - NM_000465 BARD1 0 . . . 0.75 0 46 6.9 Yes 19 0.1 No 0 0 No -28 0.88 Yes 49 52.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104174608 - NM_001100119 XRCC3 0 . . . 2.37 68.92 19 5.48 No 50 -3.22 No 0 0 No -18 0.57 No 61 43.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68812132 + NM_004360 CDH1 0 . . . 4.87 85.02 18 4.69 No 4 1.07 Yes 0 0 No -17 0.71 Yes 49 75.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68447702 + NM_133509 RAD51B 0 . . . 1.24 70.97 32 6.16 Yes 55 -4.57 No 0 0 No -31 0.71 Yes 45 58.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90956211 - NM_002485 NBN 0 . . . 1.17 62.63 15 8.32 Yes 65 -3.26 No 0 0 No -53 0.55 No 31 52.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68826227 + NM_004360 CDH1 0 . . . 6.5 86.2 17 5.57 Yes 9 1.17 Yes 0 0 No -16 0.67 Yes 49 81.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69041410 + NM_133509 RAD51B 0 . . . 4.51 78.59 29 5.47 No 72 -5.13 No 0 0 No -28 0.75 Yes 51 74.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29083565 - NM_001005735 CHEK2 0 . . . 1.51 86.33 25 4.83 No 33 1.13 Yes 0 0 No -24 0.84 Yes 25 64.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69042401 + NM_133509 RAD51B 0 . . . 2.14 71.49 24 5.2 No 6 2.37 Yes 0 0 No -24 0.77 Yes 52 51.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47739989 + NM_000251 MSH2 0 . . . 5.58 83.01 35 6.08 Yes 33 1.34 Yes 0 0 No -34 0.68 Yes 50 67.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131966907 + NM_005732 RAD50 0 . . . 6.6 86.2 34 5.01 No 3 1.81 Yes 0 0 No -24 0.42 No 49 93.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215640457 - NM_000465 BARD1 0 . . . 4.86 74.87 14 4.47 No 46 0.76 No 0 0 No -21 0.35 No 40 62.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190708510 + NM_000534 PMS1 0 . . . 1.8 69.99 26 4.77 No 76 -6.54 No 0 0 No -25 0.62 No 47 33.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47756205 + NM_000251 MSH2 0 . . . 3.93 0 32 5.16 No 18 1.28 Yes 30 0.8 Yes -31 0.75 Yes 40 59.78 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68770412 + NM_133509 RAD51B 0 . . . 2.7 76.82 18 3.85 No 21 0.29 No 0 0 No -20 0.79 Yes 44 40.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68767137 + NM_133509 RAD51B 0 . . . 4.41 84.55 13 4.36 No 37 1.28 Yes 0 0 No -29 0.89 Yes 21 80.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68818191 + NM_004360 CDH1 0 . . . 5.01 82.55 20 6.98 Yes 44 1.35 Yes 0 0 No -19 0.9 Yes 46 60.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59896221 - NM_032043 BRIP1 0 . . . 4.8 75.5 30 5.97 Yes 58 -3.74 No 0 0 No -29 0.8 Yes 42 88.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6033624 - NM_000535 PMS2 0 . . . 0.45 67.76 47 6.84 Yes 65 0.13 No 0 0 No -46 0.35 No 44 53.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69124355 + NM_133509 RAD51B 0 . . . 3.6 76.04 38 5.7 Yes 62 0.86 Yes 0 0 No -25 0.74 Yes 54 74.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94197355 - NM_005591 MRE11 0 . . . 0.92 0 16 6.35 Yes 61 0.54 No 0 0 No -21 0.6 No 49 67.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59833678 - NM_032043 BRIP1 0 . . . 6.8 78.95 19 4.96 No 55 0.92 Yes 0 0 No -31 0.68 Yes 52 77.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59836958 - NM_032043 BRIP1 0 . . . 2.34 69.33 38 6.1 Yes 49 1.23 Yes 0 0 No -22 0.33 No 51 44.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47634162 + NM_000251 MSH2 0 . . . 2.11 75 16 4.67 No 76 -5.35 No 0 0 No -20 0.73 Yes 50 44.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37050474 + NM_000249 MLH1 0 . . . 3.55 68.09 17 5.65 Yes 17 0.94 Yes 0 0 No -25 0.47 No 50 39.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69092864 + NM_133509 RAD51B 0 . . . 6.38 81.04 23 5.08 No 65 -4.3 No 0 0 No -26 0.58 No 49 66.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94170199 - NM_005591 MRE11 0 . . . 7.38 79.05 26 5.03 No 70 0.05 No 0 0 No -25 0.79 Yes 45 51.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68976887 + NM_133509 RAD51B 0 . . . 7.72 87.1 38 6.32 Yes 49 0.65 No 0 0 No -37 0.58 No 38 57.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69089388 + NM_133509 RAD51B 0 . . . 5.84 74.01 10 4.9 No 50 0.6 No 0 0 No -22 0.36 No 44 51.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68822165 + NM_133509 RAD51B 0 . . . 3.99 73.54 21 5.65 Yes 62 0.66 No 0 0 No -26 0.41 No 41 56.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68671884 + NM_133509 RAD51B 0 . . . 5.28 77.52 21 5.2 No 11 0.98 Yes 0 0 No -45 0.85 Yes 47 80.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152357488 - NM_005431 XRCC2 0 . . . 1.96 79.32 32 6.53 Yes 69 1.74 Yes 0 0 No -30 0.52 No 44 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94189603 - NM_005591 MRE11 0 . . . 0.05 62.54 16 5.29 No 22 0.04 No 0 0 No -21 0.77 Yes 22 49.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108106764 + NM_000051 ATM 0 . . . 0.87 69.25 21 6.78 Yes 45 2.13 Yes 0 0 No -26 0.81 Yes 13 49.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68996516 + NM_133509 RAD51B 0 . . . 2.92 72.86 13 3.24 No 2 0.09 No 0 0 No -21 0.62 No 41 50.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68745601 + NM_133509 RAD51B 0 . . . 0.43 0 21 4.47 No 54 0.7 No 0 0 No -20 0.93 Yes 24 80.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1213925 + NM_000455 STK11 0 . . . 8.59 83.62 46 5.22 No 0 0.53 No 0 0 No -20 0.86 Yes 42 82.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68475654 + NM_133509 RAD51B 0 . . . 3.34 77.44 36 6.04 Yes 69 1.29 Yes 0 0 No -26 0.48 No 52 41.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94199112 - NM_005591 MRE11 0 . . . 0.2 0 15 5.1 No 66 1.34 Yes 0 0 No -27 0.57 No 31 82.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68970397 + NM_133509 RAD51B 0 . . . 8.26 85.08 28 5.38 No 11 0.32 No 0 0 No -43 0.41 No 47 94.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32965603 + NM_000059 BRCA2 0 . . . 1.89 80.46 17 4.47 No 12 -1.68 No 0 0 No -16 0.88 Yes 46 76.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32960920 + NM_000059 BRCA2 0 . . . 2.65 72.96 26 5.39 No 66 0.72 No 0 0 No -25 0.36 No 45 76.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75517507 - NM_001040108 MLH3 0 . . . 13.41 96.68 25 5.29 No 55 0.32 No 0 0 No -24 0.56 No 19 96.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68353465 + NM_133509 RAD51B 0 . . . 3.22 77.26 19 3.59 No 7 0.12 No 26 0.76 Yes -24 0.6 No 51 70.22 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 215667351 - NM_000465 BARD1 0 . . . 4.35 76.94 23 5.29 No 57 0.48 No 0 0 No -22 0.95 Yes 48 75.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68967084 + NM_133509 RAD51B 0 . . . 0.34 67.76 21 4.8 No 46 1.05 Yes 0 0 No -20 0.59 No 52 44.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94201948 - NM_005591 MRE11 0 . . . 2.55 70.66 23 5.12 No -1 0.34 No 0 0 No -22 0.79 Yes 44 49.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68447640 + NM_133509 RAD51B 0 . . . 0.73 69.12 20 5.83 Yes 46 -2.19 No 0 0 No -19 0.42 No 39 52.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59805638 - NM_032043 BRIP1 0 . . . 3.14 76.48 36 5.42 No 70 0.32 No 0 0 No -36 0.66 No 47 45.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94168461 - NM_005591 MRE11 0 . . . 1.62 78.24 45 7.07 Yes 37 0.61 No 0 0 No -34 0.63 No 26 50.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75493257 - NM_001040108 MLH3 0 . . . 4.06 69.54 14 4.47 No 36 0.92 Yes 0 0 No -48 0.93 Yes 22 69.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59760329 - NM_032043 BRIP1 0 . . . 2.28 85.02 37 5.54 No 66 0.73 No 0 0 No -26 0.73 Yes 49 76.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108113825 + NM_000051 ATM 0 . . . 4.55 68.99 17 4.8 No 45 0.46 No 0 0 No -34 0.93 Yes 39 82.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90953047 - NM_002485 NBN 0 . . . 2.06 79.58 19 3.37 No 65 -2.3 No 0 0 No -22 0.68 Yes 44 71.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94196905 - NM_005591 MRE11 0 . . . 5.05 65.03 10 4.69 No 60 1.15 Yes 0 0 No -21 0.59 No 47 87.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94197700 - NM_005591 MRE11 0 . . . 5.7 79.1 22 4.52 No 61 -1.34 No 0 0 No -37 0.58 No 52 43.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94155852 - NM_005591 MRE11 0 . . . 3.99 74.53 21 4.82 No 7 1.46 Yes 0 0 No -20 0.49 No 44 91.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68437987 + NM_133509 RAD51B 0 . . . 5.23 72.09 13 4.1 No 12 -1.65 No 0 0 No -19 0.54 No 47 73.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68841129 + NM_004360 CDH1 0 . . . 8.7 82.01 13 6.48 Yes 18 0.45 No 0 0 No -22 0.27 No 40 93.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33430763 - NM_002878 RAD51D 0 . . . 4.91 76.01 42 6.4 Yes 9 0.47 No 0 0 No -41 0.47 No 44 65.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68923449 + NM_133509 RAD51B 0 . . . 1.57 69.82 18 4.9 No 62 -5.16 No 0 0 No -17 0.63 No 47 85.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29087600 - NM_001005735 CHEK2 0 . . . 3.88 78.04 46 7.46 Yes 16 0.99 Yes 0 0 No -36 0.82 Yes 42 91.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68742372 + NM_133509 RAD51B 0 . . . 6.47 81.15 14 4.47 No 45 0.22 No 0 0 No -32 0.24 No 21 65.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90951695 - NM_002485 NBN 0 . . . 3.22 71.7 22 4.53 No 56 0.5 No 0 0 No -21 0.69 Yes 46 47.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460976 + NM_133509 RAD51B 0 . . . 6.58 86.92 23 6.24 Yes 32 2.23 Yes 0 0 No -22 0.86 Yes 55 29.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45794644 - NM_001048171 MUTYH 0 . . . 3.42 70.45 21 3.45 No 67 1.91 Yes 0 0 No -21 0.63 No 47 70.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68792135 + NM_133509 RAD51B 0 . . . 3.19 78.35 19 3.67 No 41 0.11 No 0 0 No -23 0.5 No 49 63.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68367888 + NM_133509 RAD51B 0 . . . 3.14 0 41 6.43 Yes 3 0.81 Yes 0 0 No -24 0.49 No 52 30.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94207439 - NM_005591 MRE11 0 . . . 1.29 73.86 22 6.85 Yes 16 0.9 Yes 0 0 No -21 0.96 Yes 47 71.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68561808 + NM_133509 RAD51B 0 . . . 0.83 75.97 29 6.06 Yes 7 0.17 No 0 0 No -28 0.81 Yes 42 52.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47749733 + NM_000251 MSH2 0 . . . 1.78 83.14 18 6.16 Yes 3 0.82 Yes 0 0 No -57 0.47 No 50 88.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68580914 + NM_133509 RAD51B 0 . . . 2.87 64.64 15 4.58 No 20 0.03 No 0 0 No -20 0.37 No 38 85.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108104267 + NM_000051 ATM 0 . . . 3.67 82.14 42 5.87 Yes 67 -5.67 No 0 0 No -34 0.47 No 47 57.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68652228 + NM_133509 RAD51B 0 . . . 4.77 81.82 15 7 Yes 57 0.72 No 0 0 No -21 0.7 Yes 46 76.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32929406 + NM_000059 BRCA2 0 . . . -0.12 68.07 36 6.29 Yes 0 0.31 No 0 0 No -35 0.76 Yes 48 27.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68854527 + NM_133509 RAD51B 0 . . . 4.18 70.85 19 5.48 No 67 1.37 Yes 0 0 No -18 0.58 No 46 58.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215670178 - NM_000465 BARD1 0 . . . 2.12 83.7 18 4.8 No 35 1.78 Yes 0 0 No -49 0.34 No 51 82.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32902780 + NM_000059 BRCA2 0 . . . 0.01 67.1 28 7.08 Yes 73 1.17 Yes 0 0 No -27 0.66 No 54 44.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68639575 + NM_133509 RAD51B 0 . . . 4.63 74.57 25 6.96 Yes 15 0.79 Yes 0 0 No -24 0.95 Yes 46 63.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108176036 + NM_000051 ATM 0 . . . 1.67 68.17 17 3.44 No 44 0.06 No 0 0 No -23 0.93 Yes 45 36.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29134891 - NM_001005735 CHEK2 0 . . . 5.95 85.03 18 6.36 Yes 0 0.61 No 0 0 No -29 0.41 No 41 81.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68435881 + NM_133509 RAD51B 0 . . . 6.36 68.63 24 4.87 No 29 0.29 No 0 0 No -23 0.9 Yes 33 64.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68991380 + NM_133509 RAD51B 0 . . . 0.81 0 25 3.57 No 27 1.4 Yes 0 0 No -27 0.61 No 31 91.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47739285 + NM_000251 MSH2 0 . . . 8.4 80.58 35 5.79 Yes 56 -1.89 No 0 0 No -34 0.86 Yes 37 89.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68340589 + NM_133509 RAD51B 0 . . . 8.18 83.03 25 5.48 No -4 0.73 No 0 0 No -24 0.81 Yes 47 64.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108166566 + NM_000051 ATM 0 . . . 6.42 83.74 13 4.36 No 8 1.33 Yes 0 0 No -35 0.46 No 50 92.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89707788 + NM_000314 PTEN 0 . . . 4.96 0 47 7 Yes 6 0.21 No 0 0 No -34 0.83 Yes 52 86.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68863021 + NM_004360 CDH1 0 . . . 2.81 70.39 33 6.35 Yes 31 -1.73 No 0 0 No -26 0.52 No 12 40.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84402184 - NM_139076 FAM175A 0 . . . 1.99 86.9 17 4.24 No 76 1.48 Yes 0 0 No -28 0.38 No 50 44.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94189766 - NM_005591 MRE11 0 . . . 5.17 91.05 21 4.8 No 42 -3.12 No 0 0 No -20 0.89 Yes 52 48.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68822748 + NM_133509 RAD51B 0 . . . 9.07 88.97 22 5 No 0 1.01 Yes 0 0 No -22 0.48 No 35 52.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68594272 + NM_133509 RAD51B 0 . . . 2.52 76.53 16 5.23 No -3 0.03 No 0 0 No -25 0.9 Yes 53 38.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32925886 + NM_000059 BRCA2 0 . . . 0.95 64.02 29 6.24 Yes 1 0.57 No 0 0 No -22 0.81 Yes 53 57.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68901590 + NM_133509 RAD51B 0 . . . 3.09 86.72 20 5.11 No 45 0.67 No 0 0 No -17 0.55 No 54 67.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68794602 + NM_133509 RAD51B 0 . . . 5.92 89.52 18 4.3 No 55 -4.42 No 0 0 No -25 0.33 No 52 69.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47794729 + NM_000251 MSH2 0 . . . 1.87 71.97 18 4.69 No 68 -4.59 No 0 0 No -17 0.78 Yes 46 84.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68321712 + NM_133509 RAD51B 0 . . . 4.3 63.56 62 7.75 Yes 38 0.04 No 0 0 No -30 0.41 No 34 56.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69109051 + NM_133509 RAD51B 0 . . . 0.08 0 24 5.79 Yes 55 0.86 Yes 0 0 No -23 0.73 Yes 31 78.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90986917 - NM_002485 NBN 0 . . . 2.83 65.94 20 5.45 No 55 1.09 Yes 0 0 No -20 0.53 No 38 80.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40991436 + NM_001164269 RAD51 0 . . . 4.18 87.27 24 6.48 Yes 9 1.4 Yes 0 0 No -24 0.48 No 49 93.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47741342 + NM_000251 MSH2 0 . . . 3.19 90.4 23 3.83 No 8 -0.23 No 0 0 No -22 0.71 Yes 50 82.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68717051 + NM_133509 RAD51B 0 . . . 6.23 92.83 30 5.09 No 61 0.65 No 0 0 No -26 0.46 No 43 42.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68946975 + NM_133509 RAD51B 0 . . . 7.19 80.6 26 6 Yes 8 1.32 Yes 0 0 No -25 0.74 Yes 50 91.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108194692 + NM_000051 ATM 0 . . . 1.38 64.86 25 4.87 No 56 0.41 No 0 0 No -21 0.57 No 50 21.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68616464 + NM_133509 RAD51B 0 . . . 6.33 88.67 28 4.42 No 60 0.75 No 0 0 No -27 0.37 No 44 61.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47782671 + NM_000251 MSH2 0 . . . 4.28 81.52 16 5.81 Yes 54 1.14 Yes 0 0 No -28 0.54 No 44 88.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59759165 - NM_032043 BRIP1 0 . . . 1.89 76.88 22 4.58 No 57 0.12 No 0 0 No -40 0.71 Yes 42 65.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69118313 + NM_133509 RAD51B 0 . . . 0.87 78.66 35 6.4 Yes 41 0.58 No 0 0 No -24 0.74 Yes 17 35.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69094985 + NM_133509 RAD51B 0 . . . 3.45 67.09 26 6 Yes 17 0.66 No 0 0 No -26 0.43 No 41 84.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108121515 + NM_000051 ATM 0 . . . 1.54 76.44 18 5.94 Yes 26 1.24 Yes 0 0 No -29 0.35 No 32 64.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68673135 + NM_133509 RAD51B 0 . . . 4.48 76.68 15 5.38 No 3 0.76 No 0 0 No -25 0.41 No 44 87.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59879514 - NM_032043 BRIP1 0 . . . 2.83 67.39 28 5.38 No 45 1.54 Yes 0 0 No -27 0.94 Yes 45 47.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84382952 - NM_139076 FAM175A 0 . . . 5.48 74.41 44 7.07 Yes 1 1.3 Yes 0 0 No -43 0.37 No 51 36.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75492368 - NM_001040108 MLH3 0 . . . 0.66 66.49 33 5.92 Yes 65 -2.53 No 0 0 No -32 0.8 Yes 49 90.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68696486 + NM_133509 RAD51B 0 . . . 1.17 75.85 34 6.71 Yes 36 1.02 Yes 0 0 No -29 0.74 Yes 53 33.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68884707 + NM_133509 RAD51B 0 . . . 4.81 73.8 21 5.2 No 17 0.3 No 0 0 No -22 0.45 No 47 47.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23617793 - NM_024675 PALB2 0 . . . 0.97 61.91 21 5.2 No 70 -4.08 No 0 0 No -20 0.65 No 40 53.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68830875 + NM_004360 CDH1 0 . . . 1.5 59.54 17 5.36 No 56 -3.88 No 0 0 No -27 0.71 Yes 48 42.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68408535 + NM_133509 RAD51B 0 . . . 0.31 70.3 30 5.74 Yes 9 -1.21 No 0 0 No -30 0.52 No 49 65.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694752 + NM_000534 PMS1 0 . . . 6.17 83.02 27 5.88 Yes 20 0.89 Yes 0 0 No -22 0.79 Yes 42 63.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47717471 + NM_000251 MSH2 0 . . . 3.06 0 17 4.8 No 28 1.76 Yes 0 0 No -16 0.25 No 30 64.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108097926 + NM_000051 ATM 0 . . . 2.24 80.12 13 5.65 Yes 7 1.16 Yes 0 0 No -19 0.69 Yes 51 77.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59829591 - NM_032043 BRIP1 0 . . . 3.45 70.73 23 4.9 No 21 1.42 Yes 0 0 No -22 0.91 Yes 49 64.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68884079 + NM_133509 RAD51B 0 . . . 1.77 66.85 18 4.9 No 6 -2.31 No 0 0 No -23 0.54 No 37 40.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75507533 - NM_001040108 MLH3 0 . . . 5.35 86.22 19 4.72 No 8 0.67 No 0 0 No -25 0.52 No 46 57.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94160208 - NM_005591 MRE11 0 . . . 3.65 74.64 23 4.66 No 52 1.15 Yes 0 0 No -46 0.56 No 55 32.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131978941 + NM_005732 RAD50 0 . . . 6.24 82.78 28 5.79 Yes 64 1.31 Yes 0 0 No -27 0.6 No 44 84.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190654243 + NM_000534 PMS1 0 . . . 2.72 65.4 18 4.57 No 39 1.01 Yes 0 0 No -17 0.7 Yes 39 47.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131908536 + NM_005732 RAD50 0 . . . 4.91 77.65 17 4.46 No 26 1.54 Yes 0 0 No -16 0.85 Yes 32 47.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47671962 + NM_000251 MSH2 0 . . . 6.43 90.11 28 5.39 No 76 1.18 Yes 0 0 No -27 0.7 Yes 11 54.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108129766 + NM_000051 ATM 0 . . . 0.73 67.44 22 5.19 No -3 0.38 No 0 0 No -25 0.57 No 36 71.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190652405 + NM_000534 PMS1 0 . . . 3.12 77.22 28 5.38 No 73 0.71 No 0 0 No -27 0.58 No 50 60.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89656910 + NM_000314 PTEN 0 . . . 3.37 68.95 34 7.63 Yes 60 1.49 Yes 0 0 No -33 0.55 No 42 91.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108153261 + NM_000051 ATM 0 . . . 2.87 78.75 15 3.05 No 17 0.56 No 0 0 No -26 0.54 No 47 77.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69082107 + NM_133509 RAD51B 0 . . . 3.61 84.17 19 4.19 No 45 0.67 No 0 0 No -24 0.62 No 22 64.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108231333 + NM_000051 ATM 0 . . . 2.36 69.56 17 4.8 No 70 -3.63 No 0 0 No -23 0.21 No 47 24.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59836285 - NM_032043 BRIP1 0 . . . 0.37 75.13 16 3.49 No 69 0.52 No 0 0 No -23 0.46 No 47 66.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68754224 + NM_133509 RAD51B 0 . . . 7.17 83.14 22 4.79 No 58 0.71 No 0 0 No -21 0.81 Yes 37 76.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68618605 + NM_133509 RAD51B 0 . . . 5.41 90.92 22 4.87 No 3 0.8 Yes 0 0 No -21 0.76 Yes 43 7.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190673698 + NM_000534 PMS1 0 . . . 4.24 77.89 19 5.51 No 2 0.5 No 0 0 No -29 0.67 Yes 42 88.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47647706 + NM_000251 MSH2 0 . . . 6.7 85.46 25 4.6 No 69 0.98 Yes 0 0 No -24 0.66 No 30 70.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68865537 + NM_004360 CDH1 0 . . . 5.53 76.96 19 6.06 Yes 9 1.14 Yes 0 0 No -26 0.65 No 49 89.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6028790 - NM_000535 PMS2 0 . . . 4.91 78.8 19 3.62 No -1 0.75 No 0 0 No -27 0.82 Yes 40 65.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68696405 + NM_133509 RAD51B 0 . . . 1.8 74.88 40 7.02 Yes 35 0.81 Yes 0 0 No -39 0.66 No 52 57.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37073428 + NM_000249 MLH1 0 . . . 3.65 80.78 24 6.76 Yes 72 0.85 Yes 0 0 No -23 0.89 Yes 48 38.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59819469 - NM_032043 BRIP1 0 . . . 2.05 62.21 20 7.14 Yes -3 0.26 No 0 0 No -19 0.78 Yes 61 36.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33448756 - NM_002878 RAD51D 0 . . . 3.05 0 29 5.58 Yes 10 0.59 No 0 0 No -28 0.45 No 42 84.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68710743 + NM_133509 RAD51B 0 . . . 6.12 89.71 16 4.85 No 36 1.5 Yes 0 0 No -20 0.66 Yes 48 73.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68595661 + NM_133509 RAD51B 0 . . . 8.2 89.37 28 5.28 No 61 0.6 No 0 0 No -27 0.7 Yes 51 80.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90970732 - NM_002485 NBN 0 . . . 7.16 79.59 40 6.25 Yes 1 1.08 Yes 0 0 No -20 0.63 No 47 62.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131970235 + NM_005732 RAD50 0 . . . 11.34 89.73 30 5.65 Yes 30 1.53 Yes 0 0 No -29 0.55 No 28 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68577646 + NM_133509 RAD51B 0 . . . 6.28 84.82 17 4.28 No 54 1.5 Yes 0 0 No -16 0.68 Yes 32 79.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94171267 - NM_005591 MRE11 0 . . . 3.93 84.95 16 5.74 Yes 69 -1.14 No 0 0 No -15 0.29 No 44 54.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68779316 + NM_133509 RAD51B 0 . . . 2.59 62.17 32 5.6 Yes 70 1.45 Yes 0 0 No -25 0.52 No 43 41.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47743008 + NM_000251 MSH2 0 . . . 2.62 78.65 29 5.56 Yes 76 -5.42 No 0 0 No -28 0.75 Yes 53 68.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41257887 - NM_007294 BRCA1 0 . . . 4.3 77.18 19 5 No 28 0.77 No 0 0 No -34 0.52 No 25 54.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89663625 + NM_000314 PTEN 0 . . . 7.31 78.44 39 7.33 Yes 21 0.68 No 0 0 No -25 0.6 No 37 84.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68902173 + NM_133509 RAD51B 0 . . . 3.69 64.32 24 5.39 No 15 0.82 Yes 0 0 No -23 0.74 Yes 43 92.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68861699 + NM_004360 CDH1 0 . . . 4.41 75.64 24 5.64 Yes 30 1.56 Yes 0 0 No -23 0.53 No 28 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56783917 + NM_058216 RAD51C 0 . . . 7.5 79.01 31 6.61 Yes 72 1.1 Yes 0 0 No -30 0.73 Yes 23 66.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94206575 - NM_005591 MRE11 0 . . . 1.79 71.76 25 5.39 No 45 -4.01 No 0 0 No -24 0.8 Yes 42 69.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47797849 + NM_000251 MSH2 0 . . . 5.39 86.1 36 8.03 Yes 2 1.14 Yes 0 0 No -30 0.39 No 56 63.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108236470 + NM_000051 ATM 0 . . . 3.62 63.18 20 4.69 No 64 0.26 No 0 0 No -19 0.56 No 47 36.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152349245 - NM_005431 XRCC2 0 . . . 0.78 83.57 38 7.59 Yes 30 0.86 Yes 0 0 No -38 0.63 No 35 49.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48012224 + NM_000179 MSH6 0 . . . 0.01 66.68 22 5.2 No 21 2.08 Yes 0 0 No -25 0.35 No 37 39.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68879584 + NM_133509 RAD51B 0 . . . 1.44 0 38 5.47 No 73 -6.44 No 0 0 No -29 0.47 No 47 67.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131939977 + NM_005732 RAD50 0 . . . 10.09 85.05 25 5.2 No 23 0.73 No 0 0 No -60 0.77 Yes 41 61.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108095817 + NM_000051 ATM 0 . . . 1.52 70.59 11 5.2 No 75 -4.7 No 0 0 No -27 0.52 No 49 32.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47780161 + NM_000251 MSH2 0 . . . 7.25 75.51 31 6.08 Yes 46 1.65 Yes 0 0 No -33 0.7 Yes 12 79.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94227026 - NM_005591 MRE11 0 . . . 2.75 71.73 22 4.96 No 29 -2.56 No 0 0 No -21 0.94 Yes 47 43.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68996125 + NM_133509 RAD51B 0 . . . 1.12 75.18 21 5.35 No 34 1.2 Yes 0 0 No -28 0.36 No 24 77.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190698904 + NM_000534 PMS1 0 . . . 3.17 59.92 34 5.72 Yes 32 0.69 No 0 0 No -33 0.62 No 42 74.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131972654 + NM_005732 RAD50 0 . . . 6.66 85.07 22 5.12 No 48 -1.56 No 0 0 No -28 0.61 No 42 80.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37048540 + NM_000249 MLH1 0 . . . 0.48 68.15 23 4.69 No 69 0.48 No 0 0 No -22 0.33 No 36 38.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68346418 + NM_133509 RAD51B 0 . . . 6.06 67.16 24 6.9 Yes 66 -1.41 No 0 0 No -23 0.82 Yes 48 54.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29129806 - NM_001005735 CHEK2 0 . . . 4.74 87.2 13 5 No 33 1.09 Yes 0 0 No -58 0.57 No 50 68.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32963142 + NM_000059 BRCA2 0 . . . 9.52 82.38 24 5.48 No 70 1.91 Yes 0 0 No -23 0.59 No 36 88.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108231883 + NM_000051 ATM 0 . . . 3.21 68.08 28 5.2 No 71 -3.71 No 0 0 No -27 0.86 Yes 43 57.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32933606 + NM_000059 BRCA2 0 . . . 2.8 0 21 5.04 No 14 1.19 Yes 0 0 No -45 0.43 No 41 60.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68810542 + NM_133509 RAD51B 0 . . . 3.27 72.1 27 5.57 Yes 27 0.1 No 0 0 No -24 0.63 No 38 68.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68305805 + NM_133509 RAD51B 0 . . . 4.24 73.46 34 6.71 Yes 70 0.57 No 0 0 No -23 0.48 No 32 77.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68726461 + NM_133509 RAD51B 0 . . . 9.03 78.11 10 7.07 Yes 12 1.07 Yes 0 0 No -26 0.55 No 46 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108128676 + NM_000051 ATM 0 . . . 1.05 74.3 15 4.11 No 30 1.58 Yes 0 0 No -22 0.77 Yes 46 50.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59824185 - NM_032043 BRIP1 0 . . . 3.24 72.85 13 5.74 Yes 25 0.27 No 0 0 No -20 0.68 Yes 44 74.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69081746 + NM_133509 RAD51B 0 . . . 2.28 79.13 20 5.57 Yes 71 0.96 Yes 0 0 No -19 0.68 Yes 54 68.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108169838 + NM_000051 ATM 0 . . . 2.02 64.29 16 5.22 No 0 0.28 No 0 0 No -22 0.83 Yes 46 90.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69084525 + NM_133509 RAD51B 0 . . . 9.49 84.1 20 4.9 No 22 0.47 No 0 0 No -19 0.57 No 49 70.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41015815 + NM_001164269 RAD51 0 . . . 3.67 70.45 15 4.61 No 15 0.37 No 0 0 No -26 0.44 No 40 49.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94157541 - NM_005591 MRE11 0 . . . 6.62 86.55 13 5.2 No 30 1.55 Yes 0 0 No -22 0.56 No 38 72.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37067008 + NM_000249 MLH1 0 . . . 2.47 66.04 13 4.48 No 55 0.89 Yes 0 0 No -19 0.5 No 43 74.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90997547 - NM_002485 NBN 0 . . . 10.07 81.8 68 6.4 Yes 8 1.14 Yes 0 0 No -43 0.66 Yes 44 45.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7566904 - NM_000546 TP53 0 . . . 0.34 63.36 27 5.52 No 62 0.41 No 0 0 No -26 0.94 Yes 39 67.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68885929 + NM_133509 RAD51B 0 . . . 5.29 83.65 11 5.48 No -2 0.92 Yes 0 0 No -23 0.63 No 45 54.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89652866 + NM_000314 PTEN 0 . . . 2.88 69.3 12 4.8 No 33 1.1 Yes 0 0 No -19 0.75 Yes 46 62.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37071503 + NM_000249 MLH1 0 . . . 1.92 87.55 35 6.4 Yes 6 1.14 Yes 0 0 No -34 0.81 Yes 52 72.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32914943 + NM_000059 BRCA2 0 . . . 1.95 73.24 17 5.15 No 3 0.54 No 0 0 No -19 0.83 Yes 47 87.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190735614 + NM_000534 PMS1 0 . . . 6.37 74.07 26 4.71 No 13 1.05 Yes 0 0 No -25 0.52 No 45 84.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69041355 + NM_133509 RAD51B 0 . . . 2.72 75.45 27 4.84 No -3 0.73 No 0 0 No -26 0.93 Yes 61 42.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69028187 + NM_133509 RAD51B 0 . . . 7.28 86.64 32 5.74 Yes 10 1.39 Yes 0 0 No -31 0.48 No 48 95.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68703174 + NM_133509 RAD51B 0 . . . 5.48 77.16 23 5.13 No 8 0.59 No 0 0 No -28 0.56 No 50 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215657736 - NM_000465 BARD1 0 . . . 1.73 0 36 6.02 Yes 28 0.58 No 0 0 No -23 0.72 Yes 43 55.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56804300 + NM_058216 RAD51C 0 . . . 4.42 84.22 22 4.61 No 8 1.13 Yes 0 0 No -21 0.58 No 50 95.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69020192 + NM_133509 RAD51B 0 . . . 3.12 0 33 7.8 Yes 8 0.37 No 0 0 No -32 0.92 Yes 50 62.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68468883 + NM_133509 RAD51B 0 . . . 6.23 73.76 18 4.7 No 8 0.98 Yes 0 0 No -21 0.47 No 50 58.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56812768 + NM_058216 RAD51C 0 . . . 1.12 81.83 15 4.55 No 34 1.23 Yes 0 0 No -26 0.5 No 24 59.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68676136 + NM_133509 RAD51B 0 . . . 6.74 90.31 16 5.29 No 33 1.5 Yes 0 0 No -15 0.19 No 53 69.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131947648 + NM_005732 RAD50 0 . . . 1.92 70.34 25 7.28 Yes 63 0.5 No 0 0 No -24 0.62 No 50 67.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108168881 + NM_000051 ATM 0 . . . 3.98 0 28 6.32 Yes 59 0.2 No 0 0 No -27 0.94 Yes 52 32.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32971202 + NM_000059 BRCA2 0 . . . 0.21 64.8 23 4.79 No 58 -5.16 No 0 0 No -22 0.53 No 57 37.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6032451 - NM_000535 PMS2 0 . . . 0.43 0 29 4.85 No 13 -3.12 No 0 0 No -24 0.47 No 45 60.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23636814 - NM_024675 PALB2 0 . . . 0.56 0 32 6.16 Yes 74 0.12 No 0 0 No -27 0.47 No 40 64.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105197274 + NM_021930 RINT1 0 . . . 1.35 80.35 23 4.78 No 53 0.86 Yes 0 0 No -19 0.59 No 28 43.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190653349 + NM_000534 PMS1 0 . . . 5.52 77.64 23 4.6 No 54 1.2 Yes 0 0 No -22 0.35 No 47 72.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90963077 - NM_002485 NBN 0 . . . 2.65 86.9 27 6.6 Yes 47 1.17 Yes 0 0 No -26 0.4 No 31 46.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152359924 - NM_005431 XRCC2 0 . . . 0.09 74.68 16 4.54 No 4 0.41 No 0 0 No -22 0.46 No 54 81.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59797802 - NM_032043 BRIP1 0 . . . 3.53 67.85 22 5.16 No 50 -2.68 No 0 0 No -25 0.9 Yes 43 84.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69113522 + NM_133509 RAD51B 0 . . . 4.05 82.56 15 5 No -1 1.2 Yes 0 0 No -19 0.59 No 21 66.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47710697 + NM_000251 MSH2 0 . . . 1.11 72.09 23 5.43 No 20 0.4 No 0 0 No -26 0.62 No 42 90.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32972501 + NM_000059 BRCA2 0 . . . 4.26 71.26 9 4.58 No 3 0.46 No 0 0 No -20 0.76 Yes 46 56.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68527972 + NM_133509 RAD51B 0 . . . 2.13 0 40 7.05 Yes 65 1.35 Yes 0 0 No -39 0.51 No 48 86.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59912489 - NM_032043 BRIP1 0 . . . 2.81 61.09 25 5.38 No 9 1.01 Yes 0 0 No -19 0.48 No 36 35.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215639043 - NM_000465 BARD1 0 . . . 4.6 78.32 24 5.29 No 58 1.27 Yes 0 0 No -23 0.49 No 44 84.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104164065 - NM_001100119 XRCC3 0 . . . 3.67 67.77 13 4.98 No 36 0.66 No 0 0 No -30 0.5 No 43 35.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89670685 + NM_000314 PTEN 0 . . . 5.29 95.63 12 4 No 7 0.7 No 0 0 No -33 0.58 No 51 41.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215651120 - NM_000465 BARD1 0 . . . 3.09 69.65 20 4.37 No 72 -5.37 No 0 0 No -23 0.62 No 40 88.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68392872 + NM_133509 RAD51B 0 . . . 5.58 83.78 17 4.33 No 46 1.25 Yes 0 0 No -16 0.86 Yes 47 82.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68764040 + NM_133509 RAD51B 0 . . . 4.41 79.37 30 5.66 Yes 69 0.18 No 0 0 No -25 0.47 No 44 45.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32911850 + NM_000059 BRCA2 0 . . . 0.09 68.94 16 5.19 No 74 -5.02 No 0 0 No -24 0.74 Yes 47 60.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152345804 - NM_005431 XRCC2 0 . . . 0.46 70.68 14 3.99 No 49 0.17 No 0 0 No -30 0.84 Yes 46 86.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47750744 + NM_000251 MSH2 0 . . . 0.5 0 26 5.09 No 53 -2.51 No 0 0 No -28 0.73 Yes 41 53.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59816534 - NM_032043 BRIP1 0 . . . 7.16 81.59 30 5.56 Yes 10 1.03 Yes 0 0 No -29 0.79 Yes 48 69.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69151091 + NM_133509 RAD51B 0 . . . 5.34 79.92 37 5.31 No 3 0.56 No 0 0 No -33 0.4 No 49 51.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6010488 - NM_000535 PMS2 0 . . . 1.19 71.25 13 4.36 No 19 1.19 Yes 0 0 No -38 0.52 No 39 93.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23642783 - NM_024675 PALB2 0 . . . 2.19 0 19 4.89 No 57 -1.96 No 0 0 No -18 0.65 No 48 71.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47636547 + NM_000251 MSH2 0 . . . 5.65 86.67 59 7.79 Yes 17 -1.39 No 0 0 No -41 0.63 No 13 55.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642753 - NM_000465 BARD1 0 . . . 3.26 79.69 18 6.52 Yes 18 0.17 No 0 0 No -22 0.94 Yes 40 77.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215630311 - NM_000465 BARD1 0 . . . 0.54 73.76 16 4.47 No 51 1.45 Yes 0 0 No -46 0.64 No 39 84.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69078551 + NM_133509 RAD51B 0 . . . 6.42 88.65 30 4.64 No 35 -2.47 No 0 0 No -29 0.39 No 49 86.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69118418 + NM_133509 RAD51B 0 . . . 7.1 81.52 28 6.33 Yes 74 -5.48 No 0 0 No -28 0.48 No 42 77.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1210345 + NM_000455 STK11 0 . . . 4.88 83 68 8.14 Yes 4 0.75 No 0 0 No -24 0.1 No 44 43.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68769045 + NM_133509 RAD51B 0 . . . 2.84 64.87 20 5.1 No 58 -4.95 No 0 0 No -19 0.7 Yes 47 65.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68675373 + NM_133509 RAD51B 0 . . . 8.26 91.76 18 7 Yes 7 0.52 No 0 0 No -17 0.42 No 50 74.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68300574 + NM_133509 RAD51B 0 . . . 7.72 80.56 24 6.2 Yes 0 0.76 No 0 0 No -23 0.9 Yes 43 73.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47746269 + NM_000251 MSH2 0 . . . 5.95 80.57 49 7.4 Yes 30 2.07 Yes 0 0 No -23 0.6 No 54 76.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89726529 + NM_000314 PTEN 0 . . . 3.5 74.82 23 5.19 No 43 0.79 Yes 0 0 No -22 0.5 No 43 62.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23650895 - NM_024675 PALB2 0 . . . 4.46 71.63 22 5.64 Yes 23 1.59 Yes 0 0 No -21 0.66 No 45 69.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47791055 + NM_000251 MSH2 0 . . . 2.3 79.51 28 6.22 Yes 25 0.59 No 0 0 No -27 0.7 Yes 33 85.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59809814 - NM_032043 BRIP1 0 . . . 11.82 84.31 26 6.87 Yes 14 1.14 Yes 0 0 No -25 0.78 Yes 44 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68895988 + NM_133509 RAD51B 0 . . . 1.5 67.39 27 4.7 No 27 -3.52 No 0 0 No -31 0.82 Yes 46 88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89726612 + NM_000314 PTEN 0 . . . 3.05 79.25 13 5.29 No 0 0.09 No 0 0 No -45 0.37 No 38 25.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190673862 + NM_000534 PMS1 0 . . . 3.31 64.19 28 4.52 No 74 0.91 Yes 0 0 No -28 0.52 No 51 51.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59906281 - NM_032043 BRIP1 0 . . . 3.17 74.47 34 6 Yes 66 1.11 Yes 0 0 No -33 0.69 Yes 43 95.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59826192 - NM_032043 BRIP1 0 . . . 2.7 72.3 41 5.4 No 74 0.88 Yes 0 0 No -21 0.59 No 46 87.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69062818 + NM_133509 RAD51B 0 . . . 2.19 78.17 17 4.8 No 20 0.6 No 0 0 No -26 0.6 No 38 97.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190690960 + NM_000534 PMS1 0 . . . 4 74.15 15 5.42 No 16 0.12 No 0 0 No -23 0.88 Yes 42 91.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32959646 + NM_000059 BRCA2 0 . . . 7.71 84.64 31 4.94 No 44 -1.88 No 0 0 No -30 0.62 No 47 82.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32927500 + NM_000059 BRCA2 0 . . . 4.78 76.36 16 6.28 Yes 12 1.42 Yes 0 0 No -28 0.46 No 46 95.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68500491 + NM_133509 RAD51B 0 . . . 6.69 86.18 18 5.35 No 72 1.15 Yes 0 0 No -25 0.65 No 47 40.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215626432 - NM_000465 BARD1 0 . . . 2.5 76.32 26 5.22 No 41 1.24 Yes 0 0 No -25 0.72 Yes 38 35.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69010793 + NM_133509 RAD51B 0 . . . 0.87 64.5 20 3.92 No 23 0.73 No 0 0 No -19 0.88 Yes 35 45.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89626477 + NM_000314 PTEN 0 . . . 6.8 90.78 11 5.48 No 16 0.71 No 0 0 No -31 0.44 No 47 73.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68863746 + NM_133509 RAD51B 0 . . . 3.26 78.24 15 4.53 No 53 1.94 Yes 0 0 No -18 0.56 No 50 72.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68818574 + NM_004360 CDH1 0 . . . 6.89 73.72 20 4.9 No 15 2.23 Yes 0 0 No -20 0.52 No 43 86.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75509610 - NM_001040108 MLH3 0 . . . 0.44 74.68 51 8.07 Yes 55 0.59 No 0 0 No -32 0.32 No 50 90.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32898102 + NM_000059 BRCA2 0 . . . 4.34 81.8 18 4.69 No 4 1.06 Yes 0 0 No -17 0.71 Yes 44 50.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47717104 + NM_000251 MSH2 0 . . . 6.83 91.35 22 5.2 No 30 0.87 Yes 0 0 No -21 0.61 No 50 74.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69109868 + NM_133509 RAD51B 0 . . . 8.03 79.42 18 4.9 No 6 0.72 No 0 0 No -22 0.67 Yes 40 68.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68504721 + NM_133509 RAD51B 0 . . . 3 76.23 16 4.94 No 27 0.69 No 0 0 No -20 0.73 Yes 45 47.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59829774 - NM_032043 BRIP1 0 . . . 0.92 0 33 5.92 Yes 65 0.01 No 0 0 No -32 0.55 No 38 91.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68925671 + NM_133509 RAD51B 0 . . . 1.17 63.31 36 7.17 Yes 25 1.71 Yes 0 0 No -40 0.78 Yes 38 68.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47788994 + NM_000251 MSH2 0 . . . 4.53 68.12 10 5.57 Yes 43 -3.46 No 0 0 No -28 0.82 Yes 53 82.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6017650 - NM_000535 PMS2 0 . . . 5.21 84.22 30 5.66 Yes 33 1.04 Yes 0 0 No -29 0.69 Yes 50 94.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105192984 + NM_021930 RINT1 0 . . . 7.29 90.45 34 7.48 Yes 22 0.74 No 0 0 No -33 0.7 Yes 36 77.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89722899 + NM_000314 PTEN 0 . . . 1.95 0 23 4.68 No 45 1.49 Yes 0 0 No -22 0.57 No 48 38.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68408353 + NM_133509 RAD51B 0 . . . 5.3 76.25 15 5.55 No 56 -3.34 No 0 0 No -24 0.44 No 40 80.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94193412 - NM_005591 MRE11 0 . . . 0.77 0 23 4.89 No 24 -1.8 No 0 0 No -55 0.46 No 39 48.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33441626 - NM_002878 RAD51D 0 . . . 3.68 77.82 22 5.85 Yes 22 -2.24 No 0 0 No -26 0.56 No 43 82.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47679938 + NM_000251 MSH2 0 . . . 7.34 76.02 25 5.39 No 3 0.66 No 0 0 No -22 0.78 Yes 41 65.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59934301 - NM_032043 BRIP1 0 . . . 6.45 75.02 30 5.38 No 11 0.61 No 0 0 No -33 0.51 No 51 44.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47726584 + NM_000251 MSH2 0 . . . 3.92 77.36 39 6.29 Yes 73 0.44 No 0 0 No -26 0.73 Yes 45 37.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89698160 + NM_000314 PTEN 0 . . . 2.46 72 29 5.83 Yes -2 1.05 Yes 0 0 No -25 0.35 No 24 60.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68453111 + NM_133509 RAD51B 0 . . . 4.7 75.2 22 5.29 No 28 0.35 No 0 0 No -21 0.67 Yes 30 49.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104166702 - NM_001100119 XRCC3 0 . . . 7.89 83.63 29 5.29 No 68 0.92 Yes 0 0 No -24 0.53 No 42 50.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47755898 + NM_000251 MSH2 0 . . . 5.7 81.75 13 4.8 No 73 0.7 No 0 0 No -19 0.34 No 54 44.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69061332 + NM_133509 RAD51B 0 . . . 0.33 81.96 47 7.22 Yes 9 1.07 Yes 0 0 No -30 0.77 Yes 49 77.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68332374 + NM_133509 RAD51B 0 . . . 2.13 85.37 34 5.82 Yes 33 0.98 Yes 0 0 No -33 0.78 Yes 50 45.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69139723 + NM_133509 RAD51B 0 . . . 6.31 60.82 13 7.74 Yes 43 -0.88 No 0 0 No -23 0.42 No 36 77.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68812456 + NM_004360 CDH1 0 . . . 1.83 82.57 35 6.06 Yes 31 0.27 No 0 0 No -34 0.87 Yes 47 49.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190744318 + NM_000534 PMS1 0 . . . 2.72 68.89 33 7.67 Yes 60 -2.1 No 0 0 No -32 0.73 Yes 49 49.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1224943 + NM_000455 STK11 0 . . . 6.12 77.4 24 6.7 Yes 17 1.7 Yes 0 0 No -23 0.94 Yes 41 64.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29124613 - NM_001005735 CHEK2 0 . . . 6.42 88.68 40 5.49 No 9 1.08 Yes 0 0 No -34 0.61 No 49 95.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7590896 - NM_000546 TP53 0 . . . 0.69 70.72 21 4.7 No 75 2.48 Yes 0 0 No -23 0.59 No 42 50.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6025561 - NM_000535 PMS2 0 . . . 4.81 87.58 23 5.19 No 16 1.19 Yes 0 0 No -22 0.64 No 42 94.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68543452 + NM_133509 RAD51B 0 . . . 6.17 68.7 19 6.32 Yes 50 1.02 Yes 0 0 No -25 0.57 No 29 64.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68459345 + NM_133509 RAD51B 0 . . . 3.9 69.74 24 5.45 No 46 0.08 No 0 0 No -23 0.81 Yes 51 66.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68911139 + NM_133509 RAD51B 0 . . . 2.2 0 15 4.58 No 64 -3.18 No 0 0 No -26 0.47 No 48 39.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56813547 + NM_058216 RAD51C 0 . . . 11.34 80.57 16 4.69 No 30 1.19 Yes 0 0 No -35 0.64 No 28 94.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84395672 - NM_139076 FAM175A 0 . . . 1.09 74.73 35 6.51 Yes 36 1.22 Yes 0 0 No -34 0.47 No 22 69.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47688787 + NM_000251 MSH2 0 . . . 5.77 84.39 21 5.43 No 47 -0.25 No 0 0 No -20 0.35 No 47 84.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47754059 + NM_000251 MSH2 0 . . . 0.42 63.26 29 5.25 No 76 -4.02 No 0 0 No -28 0.88 Yes 30 47.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131917233 + NM_005732 RAD50 0 . . . 8.24 87.05 20 4.22 No -3 1.41 Yes 0 0 No -19 0.53 No 39 43.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29118092 - NM_001005735 CHEK2 0 . . . 4.35 76.94 32 6.02 Yes 49 0.77 No 0 0 No -31 0.71 Yes 32 87.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23621561 - NM_024675 PALB2 0 . . . 4.79 71.2 17 5.57 Yes 10 0.5 No 0 0 No -24 0.76 Yes 45 86.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94207460 - NM_005591 MRE11 0 . . . 1.4 62.22 43 6.98 Yes 64 1.01 Yes 0 0 No -27 0.47 No 34 74.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69037860 + NM_133509 RAD51B 0 . . . 1.17 71.45 17 5.29 No 75 -2.75 No 0 0 No -21 0.47 No 44 44.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108219365 + NM_000051 ATM 0 . . . 3.98 72.89 23 3.37 No 20 0.55 No 0 0 No -19 0.3 No 52 25.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69051640 + NM_133509 RAD51B 0 . . . 3.07 84.7 24 5.28 No 41 0.61 No 0 0 No -23 0.7 Yes 61 36.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47760268 + NM_000251 MSH2 0 . . . 4.05 84.22 29 4.43 No 76 1.45 Yes 0 0 No -24 0.71 Yes 50 48.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68792802 + NM_133509 RAD51B 0 . . . 7.39 90.77 24 5.24 No 58 1.78 Yes 0 0 No -54 0.48 No 43 24.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48024492 + NM_000179 MSH6 0 . . . 7.17 83.25 9 4.5 No 71 0.88 Yes 0 0 No -37 0.38 No 45 78.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59773579 - NM_032043 BRIP1 0 . . . 0.35 71.22 21 4.9 No 51 -5.27 No 0 0 No -20 0.6 No 49 59.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68577094 + NM_133509 RAD51B 0 . . . 4.6 71.21 16 5.31 No 25 0.56 No 0 0 No -22 0.53 No 33 69.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47685050 + NM_000251 MSH2 0 . . . 7.57 85.89 47 6.47 Yes 6 1.32 Yes 0 0 No -31 0.49 No 52 85.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108092002 + NM_000051 ATM 0 . . . 0.36 0 18 5.74 Yes 36 -3.11 No 0 0 No -17 0.74 Yes 45 64.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94213209 - NM_005591 MRE11 0 . . . 3.49 74.67 35 6.67 Yes 7 0.92 Yes 0 0 No -34 0.48 No 51 72.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69101751 + NM_133509 RAD51B 0 . . . 0.36 78.63 28 5.57 Yes 48 0.7 No 0 0 No -27 0.76 Yes 55 26.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105207768 + NM_021930 RINT1 0 . . . 5.46 81.24 20 4.79 No -1 0.85 Yes 0 0 No -45 0.53 No 46 93.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47717563 + NM_000251 MSH2 0 . . . 1.27 82.4 28 5.82 Yes 76 1.49 Yes 0 0 No -27 0.65 No 25 45.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41025298 + NM_001164269 RAD51 0 . . . 1.29 79.83 18 5.94 Yes 61 0.14 No 0 0 No -21 0.45 No 36 58.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68576176 + NM_133509 RAD51B 0 . . . 2.52 78.72 15 3.17 No 29 0.65 No 0 0 No -22 0.82 Yes 29 32.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47701933 + NM_000251 MSH2 0 . . . 4.15 81.17 18 3.81 No 73 1.18 Yes 0 0 No -21 0.5 No 47 81.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37059090 + NM_000249 MLH1 0 . . . 8.27 88.92 42 4.96 No 66 -2.29 No 0 0 No -26 0.39 No 47 53.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108121375 + NM_000051 ATM 0 . . . 8.53 82.35 16 4.58 No 40 0.93 Yes 0 0 No -20 0.8 Yes 48 57.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68937051 + NM_133509 RAD51B 0 . . . 5.31 86.06 26 4.73 No 74 1.1 Yes 0 0 No -25 0.79 Yes 45 80.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32968135 + NM_000059 BRCA2 0 . . . 4.94 65.32 16 4.96 No 70 2.05 Yes 0 0 No -21 0.58 No 37 72.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84400045 - NM_139076 FAM175A 0 . . . 2.61 74.94 13 3.33 No 61 0.2 No 0 0 No -16 0.78 Yes 48 87.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68817681 + NM_004360 CDH1 0 . . . 1.56 66.46 22 6.48 Yes 16 1.14 Yes 0 0 No -21 0.96 Yes 42 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152371128 - NM_005431 XRCC2 0 . . . 8.51 79.52 23 7.28 Yes 10 0.57 No 0 0 No -22 0.85 Yes 48 82.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104172848 - NM_001100119 XRCC3 0 . . . 8.1 84.04 27 4.65 No 69 0.35 No 0 0 No -22 0.48 No 44 76.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68867904 + NM_004360 CDH1 0 . . . 2.42 82.28 27 4.52 No 56 0.43 No 0 0 No -26 0.95 Yes 44 63.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68295838 + NM_133509 RAD51B 0 . . . 0.42 0 16 4.69 No 11 0.88 Yes 0 0 No -37 0.43 No 38 75.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84385039 - NM_139076 FAM175A 0 . . . 2.98 0 34 7.27 Yes 72 0.14 No 0 0 No -33 0.42 No 53 65.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23618912 - NM_024675 PALB2 0 . . . 0.1 73.69 18 4.9 No 6 0.45 No 0 0 No -36 0.66 No 28 47.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105190031 + NM_021930 RINT1 0 . . . 4.44 79.72 17 5 No 58 0.9 Yes 0 0 No -16 0.7 Yes 40 96.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1213016 + NM_000455 STK11 0 . . . 4.74 84.41 31 4.17 No 18 1.57 Yes 0 0 No -25 0.57 No 40 95.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68317301 + NM_133509 RAD51B 0 . . . 0.38 77.47 16 4.69 No 58 -2.61 No 0 0 No -19 0.73 Yes 42 80.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29136844 - NM_001005735 CHEK2 0 . . . 1.75 83.41 22 6.25 Yes 67 0.82 Yes 0 0 No -21 0.33 No 35 74.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68571293 + NM_133509 RAD51B 0 . . . 3.02 69.29 52 6.76 Yes 18 1.38 Yes 0 0 No -51 0.69 Yes 40 84.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94220074 - NM_005591 MRE11 0 . . . 0.89 0 25 6.1 Yes 37 1.16 Yes 0 0 No -22 0.77 Yes 47 41.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190703131 + NM_000534 PMS1 0 . . . 2.68 69.72 14 5.1 No 31 1.09 Yes 0 0 No -23 0.45 No 51 54.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59883343 - NM_032043 BRIP1 0 . . . 2.69 72.92 16 4.26 No 31 0.75 No 0 0 No -16 0.33 No 44 57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68921509 + NM_133509 RAD51B 0 . . . 0.38 68.4 19 5.48 No 14 1.03 Yes 0 0 No -18 0.59 No 44 78.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215648885 - NM_000465 BARD1 0 . . . 3.31 0 41 6.4 Yes 32 0.59 No 0 0 No -27 0.64 No 35 65.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29105870 - NM_001005735 CHEK2 0 . . . 1.54 66.16 32 5.74 Yes 4 0.47 No 0 0 No -28 0.42 No 54 65.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94223629 - NM_005591 MRE11 0 . . . 1.67 73.96 22 5.29 No 60 -4.97 No 0 0 No -41 0.6 No 53 43.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41006965 + NM_001164269 RAD51 0 . . . 0.76 66.47 26 6.03 Yes 12 0.9 Yes 0 0 No -30 0.63 No 30 41.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90943685 - NM_002485 NBN 0 . . . 5.19 68.33 42 5.88 Yes 58 1.1 Yes 0 0 No -22 0.84 Yes 37 84.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41008002 + NM_001164269 RAD51 0 . . . 1.55 70.46 14 5.38 No 75 0.16 No 0 0 No -22 0.3 No 41 45.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68404494 + NM_133509 RAD51B 0 . . . 4.32 77.84 13 5.71 Yes 45 0.75 No 0 0 No -27 0.54 No 38 76.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69134432 + NM_133509 RAD51B 0 . . . 2.52 77.16 18 4.58 No 73 -4.76 No 0 0 No -39 0.62 No 50 83.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47784433 + NM_000251 MSH2 0 . . . 0.14 69.55 35 6.35 Yes 43 0.88 Yes 0 0 No -29 0.87 Yes 63 37.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190744066 + NM_000534 PMS1 0 . . . 0.42 74.73 19 5 No 34 1.3 Yes 0 0 No -18 0.5 No 24 54.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68827931 + NM_004360 CDH1 0 . . . 9.48 75.48 16 4.76 No 20 0.14 No 0 0 No -23 0.67 Yes 46 52.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68641562 + NM_133509 RAD51B 0 . . . 8.01 82.34 29 4.82 No 61 2.11 Yes 0 0 No -26 0.71 Yes 46 83.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90987008 - NM_002485 NBN 0 . . . 1.63 75.89 27 5.56 Yes 30 1.67 Yes 0 0 No -24 0.45 No 38 73.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68533101 + NM_133509 RAD51B 0 . . . 4.98 80.94 60 6.65 Yes 37 1.49 Yes 0 0 No -32 0.73 Yes 32 63.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59909058 - NM_032043 BRIP1 0 . . . 0.16 76.47 23 5.29 No 67 -4.58 No 0 0 No -26 0.74 Yes 53 66.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29100203 - NM_001005735 CHEK2 0 . . . 9.39 84.2 29 4.74 No -4 0.46 No 0 0 No -26 0.73 Yes 47 43.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84400617 - NM_139076 FAM175A 0 . . . 5.37 82.5 22 4.71 No 19 1.13 Yes 0 0 No -21 0.78 Yes 39 85.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56784932 + NM_058216 RAD51C 0 . . . 5.37 80.61 30 5.18 No 4 1.13 Yes 0 0 No -29 0.47 No 38 94.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190736808 + NM_000534 PMS1 0 . . . 7.49 73.41 16 5.56 Yes 61 1.15 Yes 0 0 No -15 0.72 Yes 49 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32960725 + NM_000059 BRCA2 0 . . . 1.34 76.31 27 5.72 Yes 34 0.04 No 0 0 No -27 0.53 No 21 42.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68900730 + NM_133509 RAD51B 0 . . . 4.81 79.13 20 4.36 No 28 0.14 No 0 0 No -19 0.67 Yes 30 83.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47766543 + NM_000251 MSH2 0 . . . 3.29 81.41 38 6.63 Yes 51 0.34 No 0 0 No -37 0.83 Yes 49 83.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68800964 + NM_133509 RAD51B 0 . . . 0.38 68.11 49 5.44 No 63 0.78 Yes 0 0 No -40 0.75 Yes 47 40.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89649370 + NM_000314 PTEN 0 . . . 3.57 80.13 49 7.42 Yes 9 0.21 No 0 0 No -46 0.59 No 49 90.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69055302 + NM_133509 RAD51B 0 . . . 3.58 76.47 29 5.57 Yes 40 -2.35 No 0 0 No -24 0.68 Yes 51 52.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56792002 + NM_058216 RAD51C 0 . . . 4.91 85.02 35 6.46 Yes 5 1.23 Yes 0 0 No -34 0.68 Yes 53 77.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68850941 + NM_004360 CDH1 0 . . . 7.3 86.88 12 4.9 No 70 -3.98 No 0 0 No -53 0.45 No 55 72.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68515812 + NM_133509 RAD51B 0 . . . 2.91 82.05 10 4 No 38 0.49 No 0 0 No -26 0.49 No 45 66.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1230349 + NM_000455 STK11 0 . . . 2.38 69.04 19 4.93 No 17 0.95 Yes 0 0 No -18 0.58 No 47 64.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131961572 + NM_005732 RAD50 0 . . . 3.82 65.84 18 5.75 Yes 59 1.16 Yes 0 0 No -24 0.56 No 48 83.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40987004 + NM_001164269 RAD51 0 . . . 3.24 69.07 25 4.37 No 25 -0.49 No 0 0 No -24 0.86 Yes 43 44.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215669721 - NM_000465 BARD1 0 . . . 3.6 85.02 37 5.53 No 4 1.2 Yes 0 0 No -23 0.51 No 44 47.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68360544 + NM_133509 RAD51B 0 . . . 6.6 80.32 9 3.87 No 12 0.88 Yes 0 0 No -27 0.59 No 46 86.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68795641 + NM_133509 RAD51B 0 . . . 1.7 71.07 15 5.39 No 9 0.89 Yes 0 0 No -28 0.33 No 49 93.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89711501 + NM_000314 PTEN 0 . . . 1.36 74.83 25 4.44 No 44 1.49 Yes 0 0 No -27 0.9 Yes 52 61.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68944403 + NM_133509 RAD51B 0 . . . 4.36 75.11 35 4.3 No 0 1.63 Yes 0 0 No -26 0.67 Yes 50 39.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37068000 + NM_000249 MLH1 0 . . . 0.68 74.02 29 3.81 No 73 0.62 No 0 0 No -22 0.48 No 54 26.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68877386 + NM_133509 RAD51B 0 . . . 1.52 85.85 11 4.12 No 45 -3.87 No 0 0 No -21 0.33 No 50 65.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68452928 + NM_133509 RAD51B 0 . . . 0.3 63.66 18 4.79 No 28 1.06 Yes 0 0 No -53 0.27 No 21 91.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131968226 + NM_005732 RAD50 0 . . . 4.17 72.39 28 4.62 No 41 1.03 Yes 0 0 No -27 0.69 Yes 46 62.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1218119 + NM_000455 STK11 0 . . . 1.87 0 35 6.12 Yes 63 -4.21 No 0 0 No -23 0.6 No 43 65.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89626895 + NM_000314 PTEN 0 . . . 0.14 75.75 16 5.56 Yes 49 0.92 Yes 0 0 No -26 0.36 No 45 93.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68966947 + NM_133509 RAD51B 0 . . . 3.19 70.41 29 5.66 Yes 33 1.12 Yes 0 0 No -28 0.34 No 50 59.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104163425 - NM_001100119 XRCC3 0 . . . 6.14 77.33 27 4.07 No 39 0.24 No 0 0 No -57 0.31 No 50 44.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68919131 + NM_133509 RAD51B 0 . . . 1.37 62.51 16 5.15 No 35 1.31 Yes 0 0 No -24 0.93 Yes 17 26.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68773128 + NM_133509 RAD51B 0 . . . 1.46 61.04 19 4.41 No 75 1.04 Yes 0 0 No -18 0.77 Yes 50 86.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68478453 + NM_133509 RAD51B 0 . . . 4.63 87.94 23 5.29 No 31 1.41 Yes 0 0 No -26 0.51 No 44 80.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84392682 - NM_139076 FAM175A 0 . . . 0.99 45.58 32 4.69 No 73 0.07 No 0 0 No -27 0.73 Yes 31 44.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59758423 - NM_032043 BRIP1 0 . . . 0.23 69.88 19 6.56 Yes 1 0.79 Yes 0 0 No -18 0.43 No 47 95.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6012993 - NM_000535 PMS2 0 . . . 6.12 86.37 17 5.53 No 4 0.45 No 0 0 No -17 0.53 No 41 72.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94226498 - NM_005591 MRE11 0 . . . 2.71 0 21 7.04 Yes 22 0.35 No 0 0 No -20 0.52 No 24 41.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68588597 + NM_133509 RAD51B 0 . . . 2.69 68.3 18 4.81 No 25 -3.09 No 0 0 No -37 0.53 No 48 76.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190736972 + NM_000534 PMS1 0 . . . 1.93 56.35 26 5.12 No 69 0.97 Yes 0 0 No -25 0.97 Yes 22 53.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215661466 - NM_000465 BARD1 0 . . . 2.2 71.55 10 4 No 48 1.05 Yes 0 0 No -22 0.5 No 43 28.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56771540 + NM_058216 RAD51C 0 . . . 2.25 65.55 192 13.99 Yes 49 0.75 No 0 0 No -48 0.43 No 47 56.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68871275 + NM_004360 CDH1 0 . . . 3.15 68.34 29 5.63 Yes 21 1.71 Yes 0 0 No -27 0.32 No 37 78.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105185497 + NM_021930 RINT1 0 . . . 3.01 69.7 18 5.28 No 70 1.38 Yes 0 0 No -22 0.75 Yes 41 95.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90972899 - NM_002485 NBN 0 . . . 0.56 72.94 25 5.57 Yes 57 0.43 No 0 0 No -35 0.4 No 42 58.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41237277 - NM_007294 BRCA1 0 . . . 2.25 86.71 22 5.17 No 32 1.13 Yes 0 0 No -21 0.57 No 50 73.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68586427 + NM_133509 RAD51B 0 . . . 4.03 90.18 24 6.24 Yes 49 0.79 Yes 0 0 No -23 0.85 Yes 37 65.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68854658 + NM_004360 CDH1 0 . . . 4.36 80.27 17 4.8 No 70 0.77 Yes 0 0 No -16 0.55 No 44 55.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68532064 + NM_133509 RAD51B 0 . . . 3.63 81.59 24 5.1 No 36 0.39 No 0 0 No -23 0.9 Yes 38 70.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7583174 - NM_000546 TP53 0 . . . 9.63 84.7 28 6.28 Yes 66 -1.38 No 0 0 No -27 0.93 Yes 47 81.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105204468 + NM_021930 RINT1 0 . . . 0.1 0 19 6.86 Yes 42 -3.67 No 0 0 No -23 0.63 No 45 21.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1228552 + NM_000455 STK11 0 . . . 4.6 80.3 90 8.9 Yes 45 -1.35 No 0 0 No -32 0.4 No 41 25.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68843235 + NM_004360 CDH1 0 . . . 1.26 62.62 15 5.82 Yes 15 0.75 No 0 0 No -15 0.51 No 38 55.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47632028 + NM_000251 MSH2 0 . . . 3.6 85.02 28 5.13 No 4 1.05 Yes 0 0 No -23 0.56 No 54 64.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41021289 + NM_001164269 RAD51 0 . . . 4.3 82.66 19 5.48 No 8 -2.87 No 0 0 No -18 0.62 No 51 74.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94181082 - NM_005591 MRE11 0 . . . 2.67 76.53 32 5.74 Yes 22 0.6 No 0 0 No -31 0.82 Yes 50 65.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52442971 - NM_004656 BAP1 0 . . . 2.4 0 15 5.66 Yes 1 0.65 No 0 0 No -25 0.67 Yes 57 33.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47655909 + NM_000251 MSH2 0 . . . 3.53 70.39 24 5.38 No 28 0.99 Yes 0 0 No -23 0.7 Yes 44 58.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29087323 - NM_001005735 CHEK2 0 . . . 3.3 75.05 17 6.93 Yes 75 0.95 Yes 0 0 No -27 0.45 No 49 77.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215650808 - NM_000465 BARD1 0 . . . 2.3 0 25 5.39 No 43 -2.14 No 0 0 No -44 0.77 Yes 37 67.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41260926 - NM_007294 BRCA1 0 . . . 2.01 68.3 17 4.57 No 16 -0.38 No 0 0 No -22 0.58 No 42 59.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68444103 + NM_133509 RAD51B 0 . . . 5.3 82.7 22 5.2 No 64 -4.18 No 0 0 No -21 0.58 No 50 71.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59811948 - NM_032043 BRIP1 0 . . . 2.83 70.62 30 9.73 Yes 71 1.24 Yes 0 0 No -29 0.8 Yes 49 74.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94210877 - NM_005591 MRE11 0 . . . 0.29 0 33 6.15 Yes 18 1.27 Yes 0 0 No -32 0.75 Yes 40 79.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47705987 + NM_000251 MSH2 0 . . . 1.77 84.22 28 5.75 Yes 33 1.12 Yes 0 0 No -27 0.82 Yes 25 42.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131919548 + NM_005732 RAD50 0 . . . 1.54 68.84 24 5.48 No 52 0.03 No 0 0 No -23 0.76 Yes 48 79.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89688995 + NM_000314 PTEN 0 . . . 8.17 75.99 21 5.74 Yes 27 0.86 Yes 0 0 No -25 0.64 No 44 80.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23637607 - NM_024675 PALB2 0 . . . 2.53 75.86 21 5.07 No 22 0.02 No 0 0 No -37 0.69 Yes 46 64.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56801280 + NM_058216 RAD51C 0 . . . 0.32 0 34 4.46 No 26 0.39 No 0 0 No -33 0.36 No 32 64.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56811662 + NM_058216 RAD51C 0 . . . 2.47 79.03 21 7.21 Yes 36 -2.75 No 0 0 No -20 0.85 Yes 48 41.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131907890 + NM_005732 RAD50 0 . . . 0.27 64.97 29 5.29 No 15 0.44 No 0 0 No -24 0.54 No 49 83.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47800976 + NM_000251 MSH2 0 . . . 5.36 68.76 21 4.75 No 44 0.99 Yes 0 0 No -20 0.91 Yes 43 52.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69123475 + NM_133509 RAD51B 0 . . . 5.11 85.6 16 4.54 No 51 0.23 No 0 0 No -19 0.63 No 48 68.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41195844 - NM_007294 BRCA1 0 . . . 6.61 79.79 14 4.57 No 16 1.49 Yes 0 0 No -24 0.46 No 42 82.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68690793 + NM_133509 RAD51B 0 . . . 2.68 70.78 16 5.74 Yes 55 -1.12 No 0 0 No -26 0.77 Yes 50 62.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68316705 + NM_133509 RAD51B 0 . . . 10.69 86.88 18 5.9 Yes 62 0.79 Yes 0 0 No -17 0.63 No 46 96.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68931699 + NM_133509 RAD51B 0 . . . 0.97 69.54 33 7.29 Yes 72 1.11 Yes 0 0 No -32 0.72 Yes 34 48.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68689960 + NM_133509 RAD51B 0 . . . 12.09 84.44 18 5.32 No 28 0.46 No 0 0 No -28 0.69 Yes 43 87.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108223347 + NM_000051 ATM 0 . . . 0.42 58.83 25 5.88 Yes 54 -2.93 No 0 0 No -24 0.92 Yes 38 85.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59841076 - NM_032043 BRIP1 0 . . . 5.04 73.38 28 4.39 No 74 0.96 Yes 0 0 No -21 0.61 No 45 67.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68817073 + NM_133509 RAD51B 0 . . . 2.54 75.93 13 5.31 No 56 1.55 Yes 0 0 No -23 0.74 Yes 46 76.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41260162 - NM_007294 BRCA1 0 . . . 0.42 74.73 16 4.43 No 33 0.87 Yes 0 0 No -20 0.63 No 44 32.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104179640 - NM_001100119 XRCC3 0 . . . 1.48 75.4 32 6.77 Yes NA NA NA 0 0 No -25 0.45 No 52 64.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47662033 + NM_000251 MSH2 0 . . . 9.46 79.88 24 4.63 No 48 1.61 Yes 0 0 No -23 0.47 No 41 64.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94176817 - NM_005591 MRE11 0 . . . 6.6 88.75 20 4.43 No 22 0.39 No 0 0 No -23 0.65 No 46 61.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59864742 - NM_032043 BRIP1 0 . . . 1.24 70.52 16 5.29 No 13 -2.89 No 0 0 No -23 0.59 No 45 28.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104172030 - NM_001100119 XRCC3 0 . . . 6.65 76.63 19 3.88 No -2 1.27 Yes 0 0 No -18 0.44 No 45 77.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29138672 - NM_001005735 CHEK2 0 . . . 1.18 70.76 28 6.16 Yes 35 1.77 Yes 0 0 No -28 0.7 Yes 23 67.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68382186 + NM_133509 RAD51B 0 . . . 8.22 87.79 20 5.83 Yes 52 0.23 No 0 0 No -29 0.33 No 46 75.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89684828 + NM_000314 PTEN 0 . . . 2.07 58.37 18 5.91 Yes 41 0.59 No 0 0 No -26 0.47 No 36 53.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89629597 + NM_000314 PTEN 0 . . . 1.79 69.09 18 4.54 No 73 0.41 No 0 0 No -39 0.52 No 49 62.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59856107 - NM_032043 BRIP1 0 . . . 0.12 66.27 26 4.94 No 45 -1.25 No 0 0 No -20 0.52 No 13 28.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59785506 - NM_032043 BRIP1 0 . . . 0.29 0 31 5.53 No -1 -2.15 No 0 0 No -28 0.41 No 45 67.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59885180 - NM_032043 BRIP1 0 . . . 4.68 88.94 70 6.94 Yes 2 0.42 No 0 0 No -23 0.57 No 40 81.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108202481 + NM_000051 ATM 0 . . . 9.17 84.57 28 6.43 Yes 40 1 Yes 0 0 No -27 0.72 Yes 39 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41223499 - NM_007294 BRCA1 0 . . . 12.01 88.23 27 5.1 No 18 0.78 Yes 0 0 No -27 0.42 No 40 83.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68667199 + NM_133509 RAD51B 0 . . . 3.33 73.79 19 5.48 No 51 1.14 Yes 0 0 No -19 0.49 No 41 55.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68732041 + NM_133509 RAD51B 0 . . . 2.84 59.14 25 5.47 No 50 0.35 No 0 0 No -24 0.88 Yes 47 56.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68522920 + NM_133509 RAD51B 0 . . . 5.57 87.77 34 5.69 Yes 43 0.7 No 0 0 No -26 0.51 No 15 83.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89629878 + NM_000314 PTEN 0 . . . 1.91 72.02 22 4.58 No -1 0.5 No 0 0 No -43 0.31 No 52 57.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84400473 - NM_139076 FAM175A 0 . . . 2.03 68.14 20 7.14 Yes 59 1.45 Yes 0 0 No -19 0.6 No 42 91.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1218571 + NM_000455 STK11 0 . . . 0.33 74.87 20 4.43 No NA NA NA 0 0 No -28 0.6 No 37 30.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6021778 - NM_000535 PMS2 0 . . . 2.53 77.35 32 5.43 No 76 0.36 No 0 0 No -31 0.77 Yes 49 64.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32950375 + NM_000059 BRCA2 0 . . . 0.95 60.83 28 5.07 No 47 1.01 Yes 0 0 No -27 0.74 Yes 38 56.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68449342 + NM_133509 RAD51B 0 . . . 3.04 68.65 28 4.49 No 65 1.08 Yes 0 0 No -23 0.6 No 46 68.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59854289 - NM_032043 BRIP1 0 . . . 6.36 81.34 25 8.99 Yes 60 0.35 No 0 0 No -24 0.55 No 40 48.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68832904 + NM_004360 CDH1 0 . . . 5.69 77.37 21 4.75 No 26 0.9 Yes 0 0 No -27 0.52 No 38 77.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69075960 + NM_133509 RAD51B 0 . . . 5.25 85.31 29 7.35 Yes 67 1.75 Yes 0 0 No -28 0.9 Yes 48 75.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190712412 + NM_000534 PMS1 0 . . . 9.18 78.12 23 5.28 No 14 1.64 Yes 0 0 No -26 0.51 No 44 92.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68338899 + NM_133509 RAD51B 0 . . . 2.93 71.09 21 4.78 No 76 -3.38 No 0 0 No -21 0.51 No 54 57.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90977406 - NM_002485 NBN 0 . . . 2.82 0 29 5.44 No 64 0.18 No 0 0 No -24 0.64 No 10 25.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59793272 - NM_032043 BRIP1 0 . . . 6.13 84.31 32 7.07 Yes 4 0 No 0 0 No -31 0.91 Yes 49 51.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29091693 - NM_001005735 CHEK2 0 . . . 1.57 75.87 22 4.56 No 72 0.92 Yes 0 0 No -21 0.57 No 44 75.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68790461 + NM_004360 CDH1 0 . . . 3.33 75.83 21 4.54 No 4 -1.54 No 0 0 No -20 0.42 No 32 61.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56804867 + NM_058216 RAD51C 0 . . . 2.04 75.81 12 4.79 No 30 1.3 Yes 0 0 No -19 0.77 Yes 45 93.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89729440 + NM_000314 PTEN 0 . . . 1.3 75.42 22 5.2 No 33 -1.19 No 0 0 No -22 0.44 No 51 66.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47737843 + NM_000251 MSH2 0 . . . 2.46 0 24 4.9 No 28 1.5 Yes 0 0 No -27 0.47 No 39 32.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190688951 + NM_000534 PMS1 0 . . . 0.8 0 22 4.95 No 10 0.83 Yes 0 0 No -21 0.83 Yes 17 45.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68636597 + NM_133509 RAD51B 0 . . . 5.86 79.26 39 5.78 Yes 47 1.18 Yes 0 0 No -38 0.55 No 39 82.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47698330 + NM_000251 MSH2 0 . . . 5.47 73.76 39 4.72 No 5 0.29 No 0 0 No -24 0.85 Yes 47 75.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68422315 + NM_133509 RAD51B 0 . . . 0.48 69.78 22 4.66 No 27 -2.53 No 0 0 No -21 0.56 No 47 39.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68609331 + NM_133509 RAD51B 0 . . . 2.19 70.66 22 6.22 Yes 17 1.04 Yes 0 0 No -21 0.84 Yes 41 86.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68673053 + NM_133509 RAD51B 0 . . . 5.99 78.94 17 4.33 No 26 1.23 Yes 0 0 No -16 0.41 No 32 47.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68395987 + NM_133509 RAD51B 0 . . . 10.21 85.7 57 5.16 No 12 0.79 Yes 0 0 No -29 0.73 Yes 46 69.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68306821 + NM_133509 RAD51B 0 . . . 1.6 64.04 16 5.09 No 51 0.98 Yes 0 0 No -20 0.88 Yes 33 35.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56776630 + NM_058216 RAD51C 0 . . . 2.89 68.34 34 6 Yes 21 1.76 Yes 0 0 No -33 0.77 Yes 37 87.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131965507 + NM_005732 RAD50 0 . . . 3.83 71.38 25 6.1 Yes 6 0.82 Yes 0 0 No -24 0.85 Yes 52 73.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104164737 - NM_001100119 XRCC3 0 . . . 3.11 67.16 52 6.33 Yes 76 0.99 Yes 0 0 No -24 0.8 Yes 42 79.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89701626 + NM_000314 PTEN 0 . . . 0.85 67.82 36 6.04 Yes 69 -4.1 No 0 0 No -26 0.67 Yes 46 61.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41211197 - NM_007294 BRCA1 0 . . . 4.56 75.7 17 5.39 No 61 1.53 Yes 0 0 No -16 0.81 Yes 51 78.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84396634 - NM_139076 FAM175A 0 . . . 1.62 66.52 27 6.18 Yes 1 0.17 No 0 0 No -26 0.9 Yes 44 55.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68366889 + NM_133509 RAD51B 0 . . . 5.73 86.26 32 6.16 Yes 56 0.97 Yes 0 0 No -31 0.82 Yes 46 54.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90995513 - NM_002485 NBN 0 . . . 5.7 84.2 30 6.78 Yes 5 0.4 No 0 0 No -29 0.8 Yes 46 66.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68307071 + NM_133509 RAD51B 0 . . . 3.39 65.33 15 5.51 No 28 1.07 Yes 0 0 No -26 0.64 No 30 93.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59887956 - NM_032043 BRIP1 0 . . . 4.04 77.01 13 4.36 No 54 0.32 No 0 0 No -30 0.85 Yes 48 79.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21977815 - NM_000077 CDKN2A 0 . . . 2.1 61.24 34 5.84 Yes -4 0.06 No 0 0 No -33 0.64 No 62 42.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190665469 + NM_000534 PMS1 0 . . . 2.19 67.64 17 4.77 No 60 0.36 No 0 0 No -22 0.63 No 48 61.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190731511 + NM_000534 PMS1 0 . . . 2.22 64.15 29 4.97 No 45 0.15 No 0 0 No -18 0.62 No 49 50.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68303223 + NM_133509 RAD51B 0 . . . 2.2 84.41 22 6.78 Yes 44 0.29 No 0 0 No -21 0.52 No 46 79.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56808965 + NM_058216 RAD51C 0 . . . 6.11 84.83 28 5.29 No 20 0.16 No 0 0 No -27 0.53 No 37 76.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69086854 + NM_133509 RAD51B 0 . . . 9.79 82.86 45 6.77 Yes 6 1.3 Yes 0 0 No -44 0.75 Yes 52 66.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190742813 + NM_000534 PMS1 0 . . . 5.77 86.98 33 7.17 Yes 9 1.13 Yes 0 0 No -33 0.47 No 49 94.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108136260 + NM_000051 ATM 0 . . . 0.75 57.92 33 6.45 Yes 43 -4.22 No 0 0 No -24 0.62 No 52 29.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68496985 + NM_133509 RAD51B 0 . . . 5.78 79.92 19 4.7 No 3 2.02 Yes 0 0 No -18 0.56 No 43 56.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89668174 + NM_000314 PTEN 0 . . . 8.01 70.23 20 5.57 Yes 54 1.11 Yes 0 0 No -19 0.49 No 42 67.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69108682 + NM_133509 RAD51B 0 . . . 3.48 72.47 28 5.55 No 75 -6.43 No 0 0 No -27 0.79 Yes 47 71.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7564999 - NM_000546 TP53 0 . . . 3.77 78.19 22 4.4 No 0 0.56 No 0 0 No -15 0.49 No 49 27.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105199593 + NM_021930 RINT1 0 . . . 0.09 74.68 24 5.29 No 4 0.41 No 0 0 No -23 0.64 No 54 83.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32962819 + NM_000059 BRCA2 0 . . . 5.13 84.41 27 5.77 Yes 45 2.1 Yes 0 0 No -26 0.53 No 43 71.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68829414 + NM_004360 CDH1 0 . . . 3.17 83.14 29 5.95 Yes 17 1.53 Yes 0 0 No -28 0.87 Yes 41 92.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68761321 + NM_133509 RAD51B 0 . . . 8.85 83.45 28 6.35 Yes 10 0.72 No 0 0 No -27 0.8 Yes 48 94.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68404093 + NM_133509 RAD51B 0 . . . 8.9 88.74 14 5.15 No 48 -3.15 No 0 0 No -21 0.36 No 47 54.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89701583 + NM_000314 PTEN 0 . . . 2.3 67.83 18 5.12 No 38 0.71 No 0 0 No -21 0.69 Yes 52 43.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68831337 + NM_004360 CDH1 0 . . . 1.57 82.34 17 5.66 Yes 12 0.91 Yes 0 0 No -16 0.43 No 46 89.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68970864 + NM_133509 RAD51B 0 . . . 1.63 78.62 15 5 No 53 0.92 Yes 0 0 No -42 0.73 Yes 54 76.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59864648 - NM_032043 BRIP1 0 . . . 5.11 78.07 22 7.26 Yes 51 0.57 No 0 0 No -21 0.81 Yes 45 44.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131944692 + NM_005732 RAD50 0 . . . 1.4 66.49 31 4.54 No 56 -3.85 No 0 0 No -24 0.37 No 37 22.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68383169 + NM_133509 RAD51B 0 . . . 1.91 79.24 16 5.57 Yes 33 1.21 Yes 0 0 No -22 0.33 No 25 83.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190734413 + NM_000534 PMS1 0 . . . 1.92 70.2 23 5.2 No 69 -3.16 No 0 0 No -23 0.64 No 53 34.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68966967 + NM_133509 RAD51B 0 . . . 0.76 57.88 17 5.28 No 53 1.12 Yes 0 0 No -57 0.7 Yes 48 42.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59776659 - NM_032043 BRIP1 0 . . . 1.28 66.86 17 4.47 No 61 -2.8 No 0 0 No -16 0.7 Yes 47 67.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68588048 + NM_133509 RAD51B 0 . . . 7.02 86.97 33 5.82 Yes 9 0.22 No 0 0 No -29 0.58 No 46 93.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94189390 - NM_005591 MRE11 0 . . . 5.65 76.52 39 4.89 No 37 0.39 No 0 0 No -20 0.52 No 48 56.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131962617 + NM_005732 RAD50 0 . . . 0.73 0 62 8.57 Yes 11 1.63 Yes 0 0 No -25 0.29 No 47 93.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69138670 + NM_133509 RAD51B 0 . . . 3.53 0 49 7.74 Yes 10 0.59 No 0 0 No -29 0.74 Yes 48 67.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32940544 + NM_000059 BRCA2 0 . . . 0.03 76.31 30 5.83 Yes 66 -2.48 No 0 0 No -29 0.82 Yes 46 61.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68884874 + NM_133509 RAD51B 0 . . . 5.23 71.56 21 4.66 No 20 0.92 Yes 0 0 No -21 0.54 No 46 62.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59911005 - NM_032043 BRIP1 0 . . . 4.41 87.77 24 4.61 No 69 0.68 No 0 0 No -23 0.65 No 22 65.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68636054 + NM_133509 RAD51B 0 . . . 6.05 77.97 43 9.85 Yes 22 0.99 Yes 0 0 No -42 0.83 Yes 40 68.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68750267 + NM_133509 RAD51B 0 . . . 5 77.64 18 4.97 No 58 -3.62 No 0 0 No -27 0.72 Yes 44 53.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105174779 + NM_021930 RINT1 0 . . . 3.45 69.13 18 4.34 No 23 1.58 Yes 0 0 No -44 0.49 No 40 69.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6025768 - NM_000535 PMS2 0 . . . 2.51 81.85 26 5.29 No 71 0.42 No 0 0 No -25 0.84 Yes 48 48.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41231189 - NM_007294 BRCA1 0 . . . 3.48 83.69 16 4.69 No 44 1.9 Yes 0 0 No -18 0.7 Yes 33 87.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190670713 + NM_000534 PMS1 0 . . . 0.57 64.54 15 5.39 No 76 0.68 No 0 0 No -52 0.73 Yes 53 33.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47767639 + NM_000251 MSH2 0 . . . 7.44 81.87 21 5.71 Yes -1 0.69 No 0 0 No -20 0.89 Yes 50 46.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108099519 + NM_000051 ATM 0 . . . 4.9 77.94 20 6.4 Yes 49 -2.89 No 0 0 No -22 0.7 Yes 52 65.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94207235 - NM_005591 MRE11 0 . . . 1.6 71.79 15 4.76 No -3 0.3 No 0 0 No -26 0.49 No 52 61.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68811898 + NM_004360 CDH1 0 . . . 4.72 71.63 16 6.26 Yes 23 1.59 Yes 0 0 No -29 0.78 Yes 45 78.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59940250 - NM_032043 BRIP1 0 . . . 7.39 83.63 17 4.8 No 64 -4.5 No 0 0 No -16 0.46 No 47 48.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37092321 + NM_000249 MLH1 0 . . . 1.41 62.69 62 9.44 Yes 31 1.05 Yes 0 0 No -61 0.65 No 27 32.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47731500 + NM_000251 MSH2 0 . . . 2.85 70.43 20 5.57 Yes 76 0.67 No 0 0 No -57 0.54 No 50 80.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69131072 + NM_133509 RAD51B 0 . . . 10.04 87.42 27 5.43 No 4 1.38 Yes 0 0 No -26 0.58 No 34 75.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89658959 + NM_000314 PTEN 0 . . . 5.86 81.73 22 6.85 Yes 35 0.65 No 0 0 No -21 0.96 Yes 41 67.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75496756 - NM_001040108 MLH3 0 . . . 1.71 84.71 19 5 No 76 1.47 Yes 0 0 No -18 0.51 No 25 37.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47644452 + NM_000251 MSH2 0 . . . 0.14 75.37 12 3.66 No 62 -5.15 No 0 0 No -26 0.43 No 45 79.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56796692 + NM_058216 RAD51C 0 . . . 2.6 84.22 29 5.62 Yes 33 1.54 Yes 0 0 No -29 0.51 No 50 81.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190725841 + NM_000534 PMS1 0 . . . 9.21 79.78 17 6.92 Yes 72 -2.64 No 0 0 No -27 0.53 No 44 76.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90993509 - NM_002485 NBN 0 . . . 1.83 67.46 25 5.2 No 16 0.37 No 0 0 No -27 0.51 No 32 52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108174066 + NM_000051 ATM 0 . . . 2.05 70.89 25 4.99 No 12 1.85 Yes 0 0 No -22 0.54 No 46 85.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41003763 + NM_001164269 RAD51 0 . . . 2.69 76.38 17 4.75 No 0 0.65 No 0 0 No -26 0.85 Yes 49 31.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29101441 - NM_001005735 CHEK2 0 . . . 5.77 77.5 15 5.74 Yes 42 0.37 No 0 0 No -19 0.65 No 43 89.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45799606 - NM_001048171 MUTYH 0 . . . 6.42 87.15 23 5.29 No 44 1.53 Yes 0 0 No -22 0.83 Yes 50 61.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7588247 - NM_000546 TP53 0 . . . 1.33 68.61 15 6.2 Yes 38 0.47 No 0 0 No -26 0.75 Yes 39 63.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45796212 - NM_001048171 MUTYH 0 . . . 7.15 81.33 33 5.91 Yes 28 2.08 Yes 0 0 No -19 0.47 No 30 93.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89644643 + NM_000314 PTEN 0 . . . 1.95 79.38 17 3.91 No 1 0.51 No 0 0 No -21 0.48 No 42 47.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90945918 - NM_002485 NBN 0 . . . 4.39 68.52 23 5.2 No 17 0.66 No 0 0 No -22 0.8 Yes 41 56.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131970833 + NM_005732 RAD50 0 . . . 6.13 77.87 23 5.38 No 21 1.27 Yes 0 0 No -23 0.49 No 37 87.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68450750 + NM_133509 RAD51B 0 . . . 6.14 88.68 40 4.85 No 9 1.13 Yes 0 0 No -39 0.61 No 49 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41016269 + NM_001164269 RAD51 0 . . . 4.04 87.12 21 5.04 No 37 0.65 No 0 0 No -20 0.47 No 51 52.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108201851 + NM_000051 ATM 0 . . . 5.58 83.94 18 4.89 No -3 1.06 Yes 0 0 No -39 0.74 Yes 45 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68772871 + NM_004360 CDH1 0 . . . 7.89 85.05 18 5.81 Yes 25 0.41 No 0 0 No -23 0.84 Yes 35 54.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37074388 + NM_000249 MLH1 0 . . . 8.06 87.5 33 6.24 Yes 25 1.69 Yes 0 0 No -24 0.74 Yes 47 96.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131926695 + NM_005732 RAD50 0 . . . 9.78 86.38 25 5.27 No 61 1.6 Yes 0 0 No -24 0.91 Yes 42 96.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89668965 + NM_000314 PTEN 0 . . . 2.68 71.29 33 5.07 No 48 0.07 No 0 0 No -26 0.8 Yes 40 86.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41248391 - NM_007294 BRCA1 0 . . . 2.3 84.41 31 5.74 Yes 34 2.21 Yes 0 0 No -30 0.84 Yes 24 83.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190657970 + NM_000534 PMS1 0 . . . 8.3 83.69 34 6.06 Yes 26 1.62 Yes 0 0 No -33 0.75 Yes 45 47.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68817679 + NM_133509 RAD51B 0 . . . 2.86 65.77 29 5.24 No 12 0.15 No 0 0 No -22 0.66 No 46 88.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68407722 + NM_133509 RAD51B 0 . . . 5.8 81.85 48 6.65 Yes 74 0.69 No 0 0 No -23 0.32 No 47 68.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69029036 + NM_133509 RAD51B 0 . . . 1.21 72.73 28 6.78 Yes 13 0.09 No 0 0 No -32 0.6 No 45 44.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68303536 + NM_133509 RAD51B 0 . . . 4.07 69.11 14 5.2 No 20 -2.81 No 0 0 No -47 0.37 No 47 55.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47676234 + NM_000251 MSH2 0 . . . 2.81 75.95 18 4.9 No 8 0.38 No 0 0 No -23 0.63 No 45 80.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52442582 - NM_004656 BAP1 0 . . . 1.33 56.34 23 6.4 Yes 57 1.31 Yes 0 0 No -28 0.76 Yes 37 63.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47662243 + NM_000251 MSH2 0 . . . 6 87.6 21 5.2 No 12 1.62 Yes 0 0 No -23 0.2 No 46 63.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69117367 + NM_133509 RAD51B 0 . . . 2.28 67.67 29 6.5 Yes 71 -4.38 No 0 0 No -28 0.82 Yes 41 64.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47660354 + NM_000251 MSH2 0 . . . 6.15 84.37 16 5.1 No 54 2.24 Yes 0 0 No -23 0.57 No 43 60.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68364529 + NM_133509 RAD51B 0 . . . 0.52 68.06 13 5.1 No 47 0.51 No 0 0 No -19 0.46 No 48 76.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1220839 + NM_000455 STK11 0 . . . 6.15 82.22 29 5.39 No NA NA NA 0 0 No -28 0.68 Yes 51 44.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68817110 + NM_133509 RAD51B 0 . . . 2.14 74.48 27 4.84 No 11 1.02 Yes 0 0 No -22 0.69 Yes 47 83.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48006698 + NM_000179 MSH6 0 . . . 2.3 0 35 6.23 Yes 19 0.14 No 0 0 No -23 0.62 No 39 62.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68309271 + NM_133509 RAD51B 0 . . . 1.83 79.69 27 5.38 No 71 1.86 Yes 0 0 No -26 0.81 Yes 51 82.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68312136 + NM_133509 RAD51B 0 . . . 0.57 67.3 32 6.26 Yes 4 0.41 No 0 0 No -31 0.89 Yes 54 87.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131953864 + NM_005732 RAD50 0 . . . 2.9 81.84 21 3.79 No 54 -3.59 No 0 0 No -25 0.47 No 44 65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190710575 + NM_000534 PMS1 0 . . . 2.42 84.22 23 6.11 Yes 3 0.66 No 0 0 No -22 0.47 No 44 38.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23618741 - NM_024675 PALB2 0 . . . 5.33 83.78 32 4.48 No 22 -1.57 No 0 0 No -19 0.4 No 52 55.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68819369 + NM_133509 RAD51B 0 . . . 4.03 79.16 17 6.63 Yes 64 -2.1 No 0 0 No -28 0.42 No 50 48.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68769597 + NM_004360 CDH1 0 . . . 3.89 84.17 25 6.23 Yes 67 0.86 Yes 0 0 No -24 0.73 Yes 20 86.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68656501 + NM_133509 RAD51B 0 . . . 1.84 85.37 21 4.95 No 32 0.75 No 0 0 No -29 0.62 No 50 67.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68289043 + NM_133509 RAD51B 0 . . . 5.16 78.21 52 5.19 No 42 1.17 Yes 0 0 No -41 0.51 No 49 87.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47705257 + NM_000251 MSH2 0 . . . 7.44 82 27 5.53 No 71 0.88 Yes 0 0 No -27 0.41 No 38 79.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94151508 - NM_005591 MRE11 0 . . . 0.13 67.2 33 5.83 Yes 55 0.3 No 0 0 No -32 0.78 Yes 17 33.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41230814 - NM_007294 BRCA1 0 . . . 5.81 75.47 25 5.13 No 4 0.58 No 0 0 No -28 0.87 Yes 51 32.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68328342 + NM_133509 RAD51B 0 . . . 0.73 65.97 44 4.64 No 12 0.23 No 0 0 No -29 0.51 No 50 54.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68960384 + NM_133509 RAD51B 0 . . . 3.06 75.23 22 7.26 Yes 14 0.51 No 0 0 No -21 0.57 No 44 75.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59868657 - NM_032043 BRIP1 0 . . . 0.42 74.73 19 4.74 No 33 1.25 Yes 0 0 No -19 0.42 No 25 68.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131974768 + NM_005732 RAD50 0 . . . 0.9 70.13 19 4.44 No 36 1.78 Yes 0 0 No -18 0.62 No 12 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131975969 + NM_005732 RAD50 0 . . . 3.69 0 31 6.35 Yes 67 -4.61 No 0 0 No -30 0.83 Yes 45 23.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29107216 - NM_001005735 CHEK2 0 . . . 3.69 81.22 20 4.69 No 7 0.31 No 0 0 No -19 0.79 Yes 47 64.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68437423 + NM_133509 RAD51B 0 . . . 4.46 81.13 16 4.66 No 70 1.9 Yes 0 0 No -40 0.44 No 40 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94172012 - NM_005591 MRE11 0 . . . 7.12 85.67 12 3.43 No -2 0.42 No 0 0 No -29 0.73 Yes 48 66.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68584328 + NM_133509 RAD51B 0 . . . 0.96 72.23 10 4 No 67 0.13 No 0 0 No -28 0.48 No 51 82.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41204051 - NM_007294 BRCA1 0 . . . 7.55 76.59 35 6.4 Yes 60 0.79 Yes 0 0 No -29 0.61 No 51 25.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40990052 + NM_001164269 RAD51 0 . . . 1.66 64.43 15 4.86 No 61 1.67 Yes 0 0 No -20 0.57 No 49 58.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69045905 + NM_133509 RAD51B 0 . . . 6.88 86.4 18 6.24 Yes 70 1.15 Yes 0 0 No -17 0.57 No 47 93.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68943970 + NM_133509 RAD51B 0 . . . 3.07 67.32 31 6.08 Yes 7 -2.17 No 0 0 No -30 0.51 No 52 66.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59883269 - NM_032043 BRIP1 0 . . . 5.75 69.64 21 5.1 No 2 0.63 No 0 0 No -20 0.64 No 47 71.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48022513 + NM_000179 MSH6 0 . . . 8.21 86.54 26 7.04 Yes 53 0.84 Yes 0 0 No -33 0.6 No 39 66.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7574490 - NM_000546 TP53 0 . . . 1.56 57.6 31 5.44 No 70 -4.65 No 0 0 No -30 0.59 No 42 48.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68441123 + NM_133509 RAD51B 0 . . . 3 73.03 27 5.15 No 7 0.57 No 0 0 No -44 0.7 Yes 46 76.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47784824 + NM_000251 MSH2 0 . . . 2.21 79.77 12 5.74 Yes 53 0.84 Yes 0 0 No -24 0.67 Yes 50 56.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59939951 - NM_032043 BRIP1 0 . . . 2.68 72.35 31 5.98 Yes 60 0.28 No 0 0 No -30 0.61 No 48 83.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41018426 + NM_001164269 RAD51 0 . . . 1.69 0 35 5.52 No 57 1.04 Yes 0 0 No -28 0.39 No 46 66.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21990457 - NM_000077 CDKN2A 0 . . . 1.78 60.75 16 4.69 No 2 0.04 No 0 0 No -36 0.67 Yes 56 45.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59815772 - NM_032043 BRIP1 0 . . . 3.93 72.42 36 6.01 Yes 76 -5.54 No 0 0 No -26 0.87 Yes 55 37.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29100022 - NM_001005735 CHEK2 0 . . . 3.58 61.3 14 5.46 No 36 -1.37 No 0 0 No -13 0.62 No 31 43.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68516814 + NM_133509 RAD51B 0 . . . 1.84 0 25 5.56 Yes 39 1.16 Yes 0 0 No -33 0.63 No 19 79.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69115044 + NM_133509 RAD51B 0 . . . 3.02 68.31 40 7.02 Yes 23 1.63 Yes 0 0 No -25 0.65 No 35 76.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41212054 - NM_007294 BRCA1 0 . . . 2.31 74.68 23 4.82 No 51 0.37 No 0 0 No -22 0.75 Yes 52 56.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68305278 + NM_133509 RAD51B 0 . . . 4.31 83.59 22 6.71 Yes 3 0.88 Yes 0 0 No -21 0.7 Yes 50 55.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68579524 + NM_133509 RAD51B 0 . . . 0.32 57.88 31 3.99 No 75 0.62 No 0 0 No -25 0.7 Yes 58 38.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59918161 - NM_032043 BRIP1 0 . . . 2.47 76.58 35 5.49 No 45 1.39 Yes 0 0 No -34 0.43 No 13 33.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68394110 + NM_133509 RAD51B 0 . . . 2.05 67.25 45 6.63 Yes 13 0.85 Yes 0 0 No -37 0.67 Yes 45 84.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69045099 + NM_133509 RAD51B 0 . . . 2.48 80.22 43 6.25 Yes 58 -3.88 No 0 0 No -42 0.81 Yes 43 71.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37091912 + NM_000249 MLH1 0 . . . 1.27 70.87 26 5.66 Yes 66 -3.28 No 0 0 No -42 0.74 Yes 49 44.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190712129 + NM_000534 PMS1 0 . . . 10.38 97.52 13 4.12 No 13 1.04 Yes 0 0 No -27 0.77 Yes 45 86.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32917169 + NM_000059 BRCA2 0 . . . 2.46 70.95 20 5.68 Yes 70 -3.58 No 0 0 No -27 0.74 Yes 43 72.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1213372 + NM_000455 STK11 0 . . . 3.3 77.07 29 5.74 Yes 59 0.95 Yes 0 0 No -29 0.29 No 40 75.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59847777 - NM_032043 BRIP1 0 . . . 2.69 77.3 28 6.91 Yes 13 0.71 No 0 0 No -28 0.45 No 19 39.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68802267 + NM_133509 RAD51B 0 . . . 4.93 68.45 28 5.29 No 58 1.15 Yes 0 0 No -21 0.42 No 47 87.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89725953 + NM_000314 PTEN 0 . . . 3.34 77.74 34 6.17 Yes 74 0.72 No 0 0 No -33 0.74 Yes 42 76.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59924618 - NM_032043 BRIP1 0 . . . 0.34 0 18 4.55 No -3 0.45 No 28 0.72 Yes -17 0.56 No 53 64.23 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr4 84406845 - NM_139076 FAM175A 0 . . . 2.41 73.64 18 4.74 No 50 1.83 Yes 0 0 No -17 0.48 No 42 80.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56778105 + NM_058216 RAD51C 0 . . . 0.89 65.81 22 4.59 No 62 1.68 Yes 0 0 No -50 0.76 Yes 48 32.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68899261 + NM_133509 RAD51B 0 . . . 2.82 69.98 30 5.82 Yes 25 1.88 Yes 0 0 No -29 0.72 Yes 30 58.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59879198 - NM_032043 BRIP1 0 . . . 2.33 72.02 18 4.77 No 26 1.56 Yes 0 0 No -22 0.49 No 52 60.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89636722 + NM_000314 PTEN 0 . . . 7.12 82.87 19 5.88 Yes 71 0.14 No 0 0 No -28 0.55 No 44 38.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59810686 - NM_032043 BRIP1 0 . . . 2 81.35 16 5.74 Yes 2 0.02 No 0 0 No -30 0.31 No 44 59.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41268299 - NM_007294 BRCA1 0 . . . 1.1 65.53 54 6.84 Yes 74 -6.26 No 0 0 No -36 0.8 Yes 48 64.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68936425 + NM_133509 RAD51B 0 . . . 6.02 82.81 22 5.29 No 4 0.72 No 0 0 No -21 0.72 Yes 50 90.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69105256 + NM_133509 RAD51B 0 . . . 4.11 81.11 25 6.05 Yes 55 0.09 No 0 0 No -24 0.63 No 47 62.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68393241 + NM_133509 RAD51B 0 . . . 7.35 75.97 28 5.29 No 50 0.64 No 0 0 No -24 0.34 No 41 69.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68864599 + NM_004360 CDH1 0 . . . 1.66 65.37 26 5.04 No 13 0.57 No 0 0 No -25 0.75 Yes 45 92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68771045 + NM_133509 RAD51B 0 . . . 6.07 69.47 30 6.26 Yes 1 0.51 No 0 0 No -29 0.46 No 40 90.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68368588 + NM_133509 RAD51B 0 . . . 2.82 62.15 27 5.27 No 8 0.76 No 0 0 No -26 0.84 Yes 50 47.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37071882 + NM_000249 MLH1 0 . . . 4.05 64.36 39 8.3 Yes 20 1.21 Yes 0 0 No -28 0.4 No 38 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68945993 + NM_133509 RAD51B 0 . . . 4.09 83.14 28 5.66 Yes 57 0.13 No 0 0 No -27 0.8 Yes 46 89.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32939057 + NM_000059 BRCA2 0 . . . 9.24 82.07 26 5.94 Yes 42 1.31 Yes 0 0 No -21 0.77 Yes 41 63.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47640687 + NM_000251 MSH2 0 . . . 2.69 83.08 15 6.63 Yes 42 0.73 No 0 0 No -37 0.72 Yes 49 58.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131954977 + NM_005732 RAD50 0 . . . 3.62 71.66 23 3.18 No 28 0.37 No 0 0 No -26 0.49 No 49 56.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59929997 - NM_032043 BRIP1 0 . . . 1.47 0 14 6.48 Yes 7 1.47 Yes 0 0 No -30 0.42 No 16 56.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59785149 - NM_032043 BRIP1 0 . . . 5.19 82.89 34 4.45 No 65 -1.06 No 0 0 No -28 0.78 Yes 48 35.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68821911 + NM_004360 CDH1 0 . . . 5.2 85.02 37 6.52 Yes 5 1.63 Yes 0 0 No -36 0.6 No 53 79.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108099523 + NM_000051 ATM 0 . . . 0.74 0 28 5.38 No 53 -2.89 No 0 0 No -27 0.8 Yes 48 64.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47725452 + NM_000251 MSH2 0 . . . 0.09 60.26 128 7.67 Yes 73 2.37 Yes 0 0 No -31 0.39 No 43 43.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47701304 + NM_000251 MSH2 0 . . . 0.63 58.07 24 4 No 54 0.06 No 0 0 No -23 0.66 Yes 45 45.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215621946 - NM_000465 BARD1 0 . . . 6.52 84.05 29 4.55 No -3 0.12 No 0 0 No -34 0.7 Yes 47 25.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56768149 + NM_058216 RAD51C 0 . . . 5.79 82.75 19 5 No 14 0.38 No 0 0 No -22 0.75 Yes 43 40.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94182361 - NM_005591 MRE11 0 . . . 0.31 0 25 5.52 No 34 0.58 No 0 0 No -29 0.46 No 49 78.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105209916 + NM_021930 RINT1 0 . . . 3.12 64.39 26 5.79 Yes 53 2.16 Yes 0 0 No -34 0.66 No 46 77.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94206873 - NM_005591 MRE11 0 . . . 7.79 80.63 26 4.48 No 74 2.1 Yes 0 0 No -28 0.47 No 46 56.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215670946 - NM_000465 BARD1 0 . . . 6.26 83.8 26 5.29 No 25 1.51 Yes 0 0 No -25 0.9 Yes 33 88.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68658077 + NM_133509 RAD51B 0 . . . 3.76 76.66 28 5.65 Yes 39 -3.96 No 0 0 No -27 0.49 No 42 79.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68507191 + NM_133509 RAD51B 0 . . . 5.21 83.74 39 7.28 Yes 72 1.12 Yes 0 0 No -23 0.36 No 51 55.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69060458 + NM_133509 RAD51B 0 . . . 7.04 80.5 21 7.34 Yes 42 1 Yes 0 0 No -20 0.75 Yes 49 38.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68291293 + NM_133509 RAD51B 0 . . . 2.32 74.21 28 5.03 No 5 1.13 Yes 0 0 No -27 0.79 Yes 53 32.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59856272 - NM_032043 BRIP1 0 . . . 0.59 0 33 6.16 Yes 12 1.47 Yes 0 0 No -32 0.78 Yes 46 77.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56786343 + NM_058216 RAD51C 0 . . . 2.93 81.27 27 5.39 No 24 0.57 No 0 0 No -26 0.66 Yes 50 75.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68848523 + NM_004360 CDH1 0 . . . 5.3 79.93 12 5.01 No 73 -3.97 No 0 0 No -19 0.8 Yes 43 69.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68841563 + NM_004360 CDH1 0 . . . 2.81 78.88 26 8.17 Yes 8 0.59 No 0 0 No -25 0.86 Yes 39 67.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68596742 + NM_133509 RAD51B 0 . . . 4.89 0 23 6.31 Yes 39 0.98 Yes 0 0 No -21 0.36 No 49 77.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108117883 + NM_000051 ATM 0 . . . 2.48 70.53 33 6.7 Yes 38 0.36 No 0 0 No -28 0.59 No 48 79.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32892623 + NM_000059 BRCA2 0 . . . 3.75 84.95 184 8.41 Yes 55 0.13 No 0 0 No -42 0.67 Yes 44 36.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29091671 - NM_001005735 CHEK2 0 . . . 5.46 82.3 15 5.52 No 12 0.03 No 0 0 No -28 0.34 No 45 54.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47771405 + NM_000251 MSH2 0 . . . 2.69 85.92 19 3.41 No 44 -2.75 No 0 0 No -24 0.48 No 47 86.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68372692 + NM_133509 RAD51B 0 . . . 9.1 92.71 71 8.72 Yes 15 0.49 No 0 0 No -25 0.38 No 43 64.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89729659 + NM_000314 PTEN 0 . . . 0.99 0 22 5.01 No 56 -4.63 No 0 0 No -28 0.53 No 49 45.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68853956 + NM_133509 RAD51B 0 . . . 3.47 74.54 18 4.9 No 29 0.89 Yes 0 0 No -23 0.63 No 43 81.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32956807 + NM_000059 BRCA2 0 . . . 2.04 83.81 35 6 Yes 71 -4.15 No 0 0 No -34 0.91 Yes 47 67.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152351180 - NM_005431 XRCC2 0 . . . 0.14 84.22 23 4.94 No 34 1.15 Yes 0 0 No -22 0.58 No 50 45.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89697309 + NM_000314 PTEN 0 . . . 3.75 78.83 30 6.78 Yes 69 1.38 Yes 0 0 No -29 0.96 Yes 51 78.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69115520 + NM_133509 RAD51B 0 . . . 1.36 69.87 27 6.16 Yes 13 0.63 No 0 0 No -26 0.91 Yes 45 71.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59901808 - NM_032043 BRIP1 0 . . . 5.86 86.48 23 5 No 72 0.66 No 0 0 No -22 0.96 Yes 41 84.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68291211 + NM_133509 RAD51B 0 . . . 0.15 74.31 28 6.63 Yes 59 0.88 Yes 0 0 No -26 0.46 No 53 57.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68379517 + NM_133509 RAD51B 0 . . . 7.13 89.75 13 5.39 No 52 1.47 Yes 0 0 No -22 0.77 Yes 49 95.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131955678 + NM_005732 RAD50 0 . . . 0.18 61.67 16 4.82 No -4 0.7 No 0 0 No -19 0.83 Yes 43 48.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59899448 - NM_032043 BRIP1 0 . . . 2.18 58.15 24 4.72 No 55 1.05 Yes 0 0 No -24 0.48 No 39 69.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68633108 + NM_133509 RAD51B 0 . . . 5.06 71.6 26 5.41 No 53 1.05 Yes 0 0 No -25 0.58 No 46 42.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59797236 - NM_032043 BRIP1 0 . . . 0.03 75.92 23 4.75 No 8 0.57 No 0 0 No -22 0.77 Yes 43 43.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68910181 + NM_133509 RAD51B 0 . . . 3.14 61.51 35 5.67 Yes 49 -2.1 No 0 0 No -28 0.7 Yes 49 69.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47685432 + NM_000251 MSH2 0 . . . 2.37 68.81 18 4.63 No 61 1.29 Yes 0 0 No -25 0.83 Yes 40 70.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59823775 - NM_032043 BRIP1 0 . . . 5.52 91.36 19 4.9 No 76 0.97 Yes 0 0 No -36 0.56 No 47 77.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89686722 + NM_000314 PTEN 0 . . . 1.77 72.49 29 5.91 Yes 7 0.74 No 0 0 No -28 0.69 Yes 30 73.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84394103 - NM_139076 FAM175A 0 . . . 4.25 74.96 29 5.77 Yes -2 0.08 No 0 0 No -29 0.58 No 34 83.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29129844 - NM_001005735 CHEK2 0 . . . 3.94 79.06 61 7.67 Yes 15 -0.21 No 0 0 No -35 0.63 No 43 79.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94153389 - NM_005591 MRE11 0 . . . 0.54 0 17 5.68 Yes 35 1.18 Yes 25 0.84 Yes -26 0.45 No 41 70.18 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr2 47754996 + NM_000251 MSH2 0 . . . 2.27 77.87 25 8.12 Yes 38 0.44 No 0 0 No -24 0.95 Yes 48 83.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131900105 + NM_005732 RAD50 0 . . . 8.4 79.57 26 6.71 Yes 46 0.19 No 0 0 No -25 0.58 No 49 73.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68427933 + NM_133509 RAD51B 0 . . . 1.57 82.27 44 5.04 No 32 1.23 Yes 0 0 No -29 0.75 Yes 26 71.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59915489 - NM_032043 BRIP1 0 . . . 5.71 76.9 43 6.06 Yes 14 0.78 Yes 0 0 No -42 0.41 No 44 86.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68730264 + NM_133509 RAD51B 0 . . . 9.01 85.36 49 7.93 Yes 3 1.21 Yes 0 0 No -33 0.56 No 48 67.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89679566 + NM_000314 PTEN 0 . . . 6.17 73.59 22 4.01 No 20 0.37 No 0 0 No -26 0.45 No 40 64.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68630860 + NM_133509 RAD51B 0 . . . 1.35 0 32 3.73 No -2 0.93 Yes 0 0 No -24 0.59 No 52 71.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68855774 + NM_133509 RAD51B 0 . . . 1.26 0 16 5.38 No 68 -3.3 No 0 0 No -22 0.34 No 50 66.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68851517 + NM_004360 CDH1 0 . . . 3.16 78.92 15 6.28 Yes 32 -3.43 No 0 0 No -13 0.24 No 48 36.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190696629 + NM_000534 PMS1 0 . . . 5.69 76.12 17 4.69 No 36 1.2 Yes 0 0 No -16 0.5 No 47 51.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90965334 - NM_002485 NBN 0 . . . 0.93 70.97 12 5.39 No 75 1.62 Yes 0 0 No -48 0.52 No 47 71.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45793421 - NM_001048171 MUTYH 0 . . . 3.69 77.61 42 6.42 Yes 29 0.77 No 0 0 No -30 0.54 No 44 50.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215655218 - NM_000465 BARD1 0 . . . 0.89 0 21 4.77 No 73 -1.71 No 0 0 No -23 0.51 No 52 72.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108126687 + NM_000051 ATM 0 . . . 1.43 76.39 16 5.29 No 46 0.93 Yes 0 0 No -24 0.44 No 52 35.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108116206 + NM_000051 ATM 0 . . . 6.77 82.53 25 5.57 Yes 43 0.42 No 0 0 No -22 0.63 No 51 69.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68376949 + NM_133509 RAD51B 0 . . . 5.06 80.76 10 5.2 No 0 0.31 No 0 0 No -18 0.47 No 41 77.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33444191 - NM_002878 RAD51D 0 . . . 0.51 76.58 25 5 No 69 -4.32 No 0 0 No -24 0.77 Yes 51 30.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68471816 + NM_133509 RAD51B 0 . . . 6.99 90.11 25 5.29 No 14 0.03 No 0 0 No -24 0.93 Yes 44 62.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68418932 + NM_133509 RAD51B 0 . . . 7.74 77.37 33 5.84 Yes 5 1.35 Yes 0 0 No -32 0.51 No 53 88.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41254011 - NM_007294 BRCA1 0 . . . 0.4 75.29 18 4.44 No 13 0.11 No 0 0 No -23 0.42 No 52 42.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75495826 - NM_001040108 MLH3 0 . . . 4.23 82.58 27 5.48 No 49 2.07 Yes 0 0 No -26 0.92 Yes 9 52.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190718268 + NM_000534 PMS1 0 . . . 0.39 0 30 5.21 No 34 1.53 Yes 0 0 No -22 0.5 No 24 61.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68548539 + NM_133509 RAD51B 0 . . . 1.2 75.08 32 6.58 Yes 67 -1.51 No 0 0 No -38 0.69 Yes 52 64.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68727334 + NM_133509 RAD51B 0 . . . 0.07 73.76 20 5.92 Yes 71 -3.82 No 0 0 No -19 0.78 Yes 50 91.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190666362 + NM_000534 PMS1 0 . . . 7.45 85.05 16 3.59 No 72 1.08 Yes 0 0 No -23 0.93 Yes 44 83.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69016684 + NM_133509 RAD51B 0 . . . 7.51 71.17 28 6.46 Yes 50 2.3 Yes 0 0 No -27 0.82 Yes 46 83.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68588563 + NM_133509 RAD51B 0 . . . 1.36 57.89 12 5.39 No 75 -4.68 No 0 0 No -54 0.76 Yes 45 63.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47763329 + NM_000251 MSH2 0 . . . 5.46 76.14 22 4.67 No 12 1.47 Yes 0 0 No -21 0.64 No 46 50.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89704458 + NM_000314 PTEN 0 . . . 5.76 80.67 17 4.8 No 45 0.4 No 0 0 No -24 0.65 No 39 75.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68509273 + NM_133509 RAD51B 0 . . . 5.88 74.83 15 5.1 No 29 2.02 Yes 0 0 No -24 0.39 No 29 90.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59828696 - NM_032043 BRIP1 0 . . . 1.88 72.61 11 4 No 0 1.54 Yes 0 0 No -31 0.79 Yes 47 90.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37087608 + NM_000249 MLH1 0 . . . 1.5 77.54 22 4.8 No 55 0.1 No 0 0 No -21 0.89 Yes 53 42.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47771445 + NM_000251 MSH2 0 . . . 4.29 75.86 30 6.14 Yes 5 1.82 Yes 0 0 No -27 0.58 No 45 78.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1208515 + NM_000455 STK11 0 . . . 2.2 72.26 18 4.61 No -2 0.17 No 0 0 No -18 0.58 No 16 52.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59764343 - NM_032043 BRIP1 0 . . . 6.3 71.21 24 4.8 No 72 0.13 No 0 0 No -23 0.59 No 53 73.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68901763 + NM_133509 RAD51B 0 . . . 7.8 78.93 22 5.29 No 45 1.39 Yes 0 0 No -28 0.46 No 44 46.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152361969 - NM_005431 XRCC2 0 . . . 7.96 78.49 44 6.52 Yes 46 1 Yes 0 0 No -19 0.46 No 39 81.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108164485 + NM_000051 ATM 0 . . . 5.71 75.31 23 5.72 Yes 16 -2.31 No 0 0 No -30 0.59 No 43 60.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215636092 - NM_000465 BARD1 0 . . . 2.42 71.15 20 5.1 No 55 -5.76 No 0 0 No -19 0.36 No 46 76.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59802161 - NM_032043 BRIP1 0 . . . 4.7 81.53 23 4.12 No 25 0.45 No 0 0 No -26 0.75 Yes 46 77.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68805732 + NM_133509 RAD51B 0 . . . 1.74 63.05 19 5 No 25 0.31 No 0 0 No -18 0.64 No 40 54.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68992274 + NM_133509 RAD51B 0 . . . 0.11 72.37 28 5 No 6 1.04 Yes 0 0 No -27 0.53 No 35 90.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89712837 + NM_000314 PTEN 0 . . . 6.59 81.74 10 4.34 No 62 1.59 Yes 0 0 No -22 0.49 No 46 97.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68942511 + NM_133509 RAD51B 0 . . . 9.35 84.24 37 6.86 Yes 3 0.08 No 0 0 No -36 0.82 Yes 46 62.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59832913 - NM_032043 BRIP1 0 . . . 4.35 0 29 5.21 No 61 1.32 Yes 0 0 No -21 0.44 No 39 68.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190695146 + NM_000534 PMS1 0 . . . 7.81 83.27 27 6.64 Yes 12 1.13 Yes 0 0 No -26 0.6 No 46 88.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56777734 + NM_058216 RAD51C 0 . . . 6.49 72.75 25 4.17 No 22 0.39 No 0 0 No -24 0.75 Yes 41 44.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59849103 - NM_032043 BRIP1 0 . . . 6.24 82.31 14 5.29 No 60 1.17 Yes 0 0 No -54 0.46 No 55 56.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190652113 + NM_000534 PMS1 0 . . . 4.2 76.97 48 6.89 Yes 9 0.35 No 0 0 No -47 0.57 No 44 59.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59907005 - NM_032043 BRIP1 0 . . . 3.68 79.01 19 4.89 No 75 1.52 Yes 0 0 No -18 0.4 No 15 44.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29083068 - NM_001005735 CHEK2 0 . . . 3.39 63.14 15 4.41 No 41 1.11 Yes 0 0 No -21 0.84 Yes 45 47.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47711063 + NM_000251 MSH2 0 . . . 0.48 70.36 39 6.86 Yes 15 0.47 No 0 0 No -38 0.43 No 39 75.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68485411 + NM_133509 RAD51B 0 . . . 5.92 77.72 19 5 No 47 1.05 Yes 0 0 No -18 0.79 Yes 47 83.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68839323 + NM_004360 CDH1 0 . . . 2.9 80.17 27 5.42 No 36 1.21 Yes 0 0 No -26 0.86 Yes 52 45.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68794622 + NM_133509 RAD51B 0 . . . 5.29 83.99 20 7.14 Yes 75 -4.41 No 0 0 No -19 0.69 Yes 48 86.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94218050 - NM_005591 MRE11 0 . . . 1.19 71.93 18 4.69 No 30 -2.58 No 0 0 No -24 0.39 No 54 38.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32914428 + NM_000059 BRCA2 0 . . . 3.48 68.45 22 5.97 Yes 74 -4.29 No 0 0 No -28 0.62 No 43 96.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45807220 - NM_001048171 MUTYH 0 . . . 2.92 68.79 25 5.08 No 14 0.87 Yes 0 0 No -25 0.42 No 44 91.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68573830 + NM_133509 RAD51B 0 . . . 3.84 80.35 14 4.7 No 75 0.28 No 0 0 No -25 0.46 No 46 85.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59846400 - NM_032043 BRIP1 0 . . . 1.24 66.8 36 6.32 Yes 65 0.8 Yes 0 0 No -35 0.55 No 41 53.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89659285 + NM_000314 PTEN 0 . . . 2.51 0 24 7.07 Yes 61 0.34 No 0 0 No -23 0.85 Yes 44 57.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131928228 + NM_005732 RAD50 0 . . . 0.66 68.86 57 7.76 Yes 39 -3.51 No 0 0 No -24 0.28 No 50 37.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152367496 - NM_005431 XRCC2 0 . . . 9.15 86.12 14 5.99 Yes 28 0.47 No 0 0 No -29 0.49 No 48 95.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45801236 - NM_001048171 MUTYH 0 . . . 0.69 57.87 22 3.97 No 60 0.76 No 0 0 No -21 0.59 No 42 49.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94202193 - NM_005591 MRE11 0 . . . 3.15 80.73 16 4.26 No 61 0.89 Yes 0 0 No -20 0.52 No 44 84.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68516771 + NM_133509 RAD51B 0 . . . 3.88 77.34 28 5.38 No -4 0.73 No 0 0 No -27 0.75 Yes 40 83.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59855993 - NM_032043 BRIP1 0 . . . 1.05 82.06 26 5.89 Yes 26 0 No 0 0 No -29 0.49 No 52 95.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68932865 + NM_133509 RAD51B 0 . . . 5.43 65.81 18 5.39 No 56 0.61 No 0 0 No -23 0.28 No 49 59.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69133113 + NM_133509 RAD51B 0 . . . 1.02 62.87 9 3.87 No 53 0.68 No 0 0 No -27 0.35 No 40 91.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89721000 + NM_000314 PTEN 0 . . . 4.34 73.63 31 5.21 No 64 0.76 No 0 0 No -49 0.7 Yes 39 76.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68801765 + NM_133509 RAD51B 0 . . . 0.6 74.68 29 6.76 Yes 4 0.1 No 0 0 No -28 0.9 Yes 54 88.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68524672 + NM_133509 RAD51B 0 . . . 0.18 0 18 6.16 Yes 1 0.09 No 0 0 No -26 0.44 No 48 76.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7573615 - NM_000546 TP53 0 . . . 0.07 68.01 38 7.02 Yes 25 -2.05 No 0 0 No -32 0.45 No 46 77.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47694240 + NM_000251 MSH2 0 . . . 5.08 67.69 34 4.83 No 50 1.62 Yes 0 0 No -33 0.74 Yes 39 58.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47721833 + NM_000251 MSH2 0 . . . 2.76 0 18 4.9 No 48 0.81 Yes 0 0 No -43 0.84 Yes 31 78.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48010089 + NM_000179 MSH6 0 . . . 3.38 67.07 24 5.48 No 70 -3.46 No 0 0 No -23 0.8 Yes 46 74.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47680803 + NM_000251 MSH2 0 . . . 4.78 74.39 43 6.53 Yes 28 0.2 No 0 0 No -42 0.82 Yes 44 81.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59879139 - NM_032043 BRIP1 0 . . . 2.2 67.83 32 5.82 Yes 38 0.89 Yes 0 0 No -31 0.82 Yes 45 41.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68797832 + NM_133509 RAD51B 0 . . . 0.09 74.68 28 5.44 No 4 0.41 No 0 0 No -27 0.71 Yes 54 81.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32910120 + NM_000059 BRCA2 0 . . . 0.16 67.8 22 5.83 Yes 16 1.28 Yes 0 0 No -21 0.7 Yes 42 96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190706799 + NM_000534 PMS1 0 . . . 4.25 77.22 46 5.86 Yes 3 0.97 Yes 0 0 No -32 0.61 No 42 60.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75512376 - NM_001040108 MLH3 0 . . . 3.8 73.38 32 6.16 Yes 67 -3.34 No 0 0 No -31 0.77 Yes 31 65.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108148644 + NM_000051 ATM 0 . . . 5.61 70.83 24 5.02 No 33 0.68 No 0 0 No -23 0.88 Yes 42 78.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47699967 + NM_000251 MSH2 0 . . . 3.26 80.19 21 5.19 No 67 -4.96 No 0 0 No -20 0.69 Yes 43 50.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89651018 + NM_000314 PTEN 0 . . . 1.84 0 31 5.83 Yes 35 1.77 Yes 0 0 No -30 0.9 Yes 23 89.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68820257 + NM_133509 RAD51B 0 . . . 1.83 0 16 3.31 No 51 -1.86 No 0 0 No -25 0.92 Yes 24 74.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68842283 + NM_133509 RAD51B 0 . . . 10.52 82.02 56 6.87 Yes -4 1.13 Yes 0 0 No -38 0.71 Yes 39 34.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190668717 + NM_000534 PMS1 0 . . . 2.45 77.01 22 4.48 No 52 0.93 Yes 0 0 No -21 0.71 Yes 48 65.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94220091 - NM_005591 MRE11 0 . . . 4.07 72.71 22 5.45 No 20 1.17 Yes 0 0 No -21 0.77 Yes 38 70.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33448678 - NM_002878 RAD51D 0 . . . 7.55 83.64 19 9.31 Yes 30 1.14 Yes 0 0 No -18 0.91 Yes 28 72.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23652675 - NM_024675 PALB2 0 . . . 7.09 77.18 44 3.6 No 58 0.46 No 0 0 No -25 0.42 No 22 21.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68660397 + NM_133509 RAD51B 0 . . . 2.09 65.99 21 5.48 No 50 -4.74 No 0 0 No -27 0.69 Yes 20 65.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220291 - NM_007294 BRCA1 0 . . . 3.19 84.41 19 4.8 No 53 1.09 Yes 0 0 No -21 0.8 Yes 46 93.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68791247 + NM_004360 CDH1 0 . . . 2.95 70.85 28 4.98 No 23 1.57 Yes 0 0 No -27 0.74 Yes 45 71.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59862803 - NM_032043 BRIP1 0 . . . 3.39 86.34 15 4.58 No 53 0.72 No 0 0 No -59 0.49 No 48 71.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69086452 + NM_133509 RAD51B 0 . . . 1.61 68.19 18 5.39 No 64 -5.24 No 0 0 No -17 0.44 No 47 36.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108217037 + NM_000051 ATM 0 . . . 3.03 66.73 30 7.11 Yes 48 1.41 Yes 0 0 No -33 0.48 No 14 71.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68798911 + NM_004360 CDH1 0 . . . 4.37 78.3 31 5.76 Yes -2 0.9 Yes 0 0 No -31 0.5 No 44 56.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94174187 - NM_005591 MRE11 0 . . . 3.38 70.65 18 4.24 No 25 -1.1 No 0 0 No -43 0.56 No 49 39.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21977983 - NM_000077 CDKN2A 0 . . . 3.46 71.96 41 8.05 Yes 13 0.83 Yes 0 0 No -34 0.69 Yes 45 68.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59920789 - NM_032043 BRIP1 0 . . . 0.87 59.8 16 6.82 Yes 39 -3.51 No 0 0 No -26 0.66 Yes 47 40.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68313330 + NM_133509 RAD51B 0 . . . 1.06 76.41 25 5.2 No 37 0.44 No 0 0 No -20 0.47 No 49 85.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108119751 + NM_000051 ATM 0 . . . 2.52 72.63 19 4.31 No 7 0.02 No 0 0 No -18 0.39 No 51 62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56794213 + NM_058216 RAD51C 0 . . . 0.41 63.93 11 4.79 No 75 1.62 Yes 0 0 No -21 0.38 No 43 48.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69000566 + NM_133509 RAD51B 0 . . . 7.97 84.78 22 5.82 Yes 18 0.51 No 0 0 No -21 0.79 Yes 31 76.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90964952 - NM_002485 NBN 0 . . . 3.15 77.01 12 5.74 Yes 0 0.95 Yes 0 0 No -26 0.71 Yes 52 38.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47633459 + NM_000251 MSH2 0 . . . 3.38 78.28 24 4.89 No 33 1.01 Yes 0 0 No -23 0.84 Yes 40 55.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68793053 + NM_004360 CDH1 0 . . . 3.99 82.03 31 5.15 No 2 1.43 Yes 0 0 No -30 0.9 Yes 48 56.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47799748 + NM_000251 MSH2 0 . . . 0.46 0 16 6.15 Yes 34 -3.72 No 0 0 No -25 0.54 No 52 68.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47654285 + NM_000251 MSH2 0 . . . 3.39 75.11 26 6.32 Yes 5 0.05 No 0 0 No -34 0.56 No 48 73.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23614211 - NM_024675 PALB2 0 . . . 6.22 82.18 18 4.51 No 22 1.26 Yes 0 0 No -44 0.78 Yes 36 72.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108120092 + NM_000051 ATM 0 . . . 3 78.28 22 5.2 No 70 0.61 No 0 0 No -59 0.38 No 45 27.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131928213 + NM_005732 RAD50 0 . . . 1.05 64.97 22 4.55 No 67 1.16 Yes 0 0 No -18 0.45 No 43 31.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68439782 + NM_133509 RAD51B 0 . . . 1.38 71.5 21 5.04 No 51 0.79 Yes 0 0 No -20 0.66 Yes 45 37.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68556966 + NM_133509 RAD51B 0 . . . 2.13 72.56 31 6.08 Yes 12 1.13 Yes 0 0 No -30 0.78 Yes 46 60.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215671497 - NM_000465 BARD1 0 . . . 1.59 86.31 13 4.75 No 33 1.03 Yes 0 0 No -23 0.73 Yes 50 52.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68473273 + NM_133509 RAD51B 0 . . . 1.31 60.51 16 5.57 Yes -4 0.12 No 0 0 No -24 0.46 No 34 64.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108119120 + NM_000051 ATM 0 . . . 3.87 78.59 19 5.9 Yes 41 0.24 No 0 0 No -18 0.68 Yes 46 84.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131893501 + NM_005732 RAD50 0 . . . 0.68 74.29 27 5.1 No 33 1.36 Yes 0 0 No -26 0.86 Yes 16 42.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215626795 - NM_000465 BARD1 0 . . . 1.03 68.38 37 5.94 Yes 37 0.26 No 0 0 No -25 0.85 Yes 48 43.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47716648 + NM_000251 MSH2 0 . . . 5.16 70.66 16 5.23 No 8 1.61 Yes 0 0 No -24 0.54 No 50 65.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108225819 + NM_000051 ATM 0 . . . 1.26 68.16 13 5 No 59 0.42 No 0 0 No -21 0.45 No 52 59.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131933784 + NM_005732 RAD50 0 . . . 4.17 87.77 24 4.8 No 37 0.58 No 0 0 No -23 0.67 Yes 21 70.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69107326 + NM_133509 RAD51B 0 . . . 1.25 64.62 17 5.47 No 47 0.09 No 0 0 No -16 0.25 No 53 25.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68776277 + NM_004360 CDH1 0 . . . 6.14 88.68 24 5.34 No 9 1.13 Yes 0 0 No -28 0.58 No 49 92.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68343337 + NM_133509 RAD51B 0 . . . 0.2 55.03 29 6.32 Yes 38 -3.03 No 0 0 No -28 0.82 Yes 44 32.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152355744 - NM_005431 XRCC2 0 . . . 4.75 78.12 28 5.66 Yes 5 0.61 No 0 0 No -27 0.81 Yes 44 31.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32958137 + NM_000059 BRCA2 0 . . . 2.97 79.01 28 5.39 No -2 0.01 No 0 0 No -20 0.28 No 51 73.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75512202 - NM_001040108 MLH3 0 . . . 7.97 87.82 18 5.79 Yes 4 0.4 No 0 0 No -17 0.64 No 47 91.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94213277 - NM_005591 MRE11 0 . . . 2.57 67.61 45 8.7 Yes 12 0.7 No 0 0 No -23 0.85 Yes 46 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131904896 + NM_005732 RAD50 0 . . . 4.83 66.61 44 5.85 Yes 72 -5.55 No 0 0 No -30 0.48 No 42 63.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108111017 + NM_000051 ATM 0 . . . 3.33 83.4 33 6.24 Yes 35 1.04 Yes 0 0 No -33 0.49 No 49 51.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68798435 + NM_133509 RAD51B 0 . . . 0.7 0 41 6.71 Yes 37 0.11 No 0 0 No -40 0.95 Yes 49 84.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47769006 + NM_000251 MSH2 0 . . . 3.43 75.09 40 7.02 Yes 42 0.45 No 0 0 No -29 0.45 No 45 80.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215651455 - NM_000465 BARD1 0 . . . 3.73 82.26 25 5.1 No 10 0.05 No 0 0 No -27 0.93 Yes 48 82.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37080972 + NM_000249 MLH1 0 . . . 3.37 74.54 49 4.91 No 43 1.01 Yes 0 0 No -38 0.44 No 53 79.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68690482 + NM_133509 RAD51B 0 . . . 0.64 0 19 5.39 No 16 0.43 No 0 0 No -18 0.82 Yes 22 39.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68636730 + NM_133509 RAD51B 0 . . . 0.07 0 28 5.38 No -3 1.09 Yes 0 0 No -27 0.43 No 47 64.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108111226 + NM_000051 ATM 0 . . . 3.92 65.37 17 5.57 Yes 74 -2.19 No 0 0 No -16 0.72 Yes 45 87.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89730307 + NM_000314 PTEN 0 . . . 8.15 82.09 18 4.8 No -3 0.93 Yes 0 0 No -17 0.53 No 45 72.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89676159 + NM_000314 PTEN 0 . . . 0.34 72.98 31 4.72 No 38 -2.24 No 0 0 No -36 0.73 Yes 50 50.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190707302 + NM_000534 PMS1 0 . . . 4.51 74.48 29 5.48 No -3 0.8 Yes 0 0 No -24 0.63 No 43 63.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68822302 + NM_133509 RAD51B 0 . . . 2.82 80.17 23 5.83 Yes 41 0.41 No 0 0 No -22 0.89 Yes 50 88.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90949639 - NM_002485 NBN 0 . . . 1.11 0 23 5.36 No 13 0.59 No 0 0 No -22 0.77 Yes 46 32.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108168642 + NM_000051 ATM 0 . . . 6.11 74.12 15 4.58 No 66 -5.26 No 0 0 No -56 0.85 Yes 42 71.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48013455 + NM_000179 MSH6 0 . . . 0.25 62.91 21 3.44 No 60 -3.82 No 0 0 No -56 0.36 No 51 57.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69053085 + NM_133509 RAD51B 0 . . . 4.04 85.53 22 5.29 No 29 2.29 Yes 0 0 No -30 0.29 No 34 79.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41004468 + NM_001164269 RAD51 0 . . . 0.92 71.92 10 5.39 No 74 -5.49 No 0 0 No -28 0.4 No 50 62.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68840971 + NM_133509 RAD51B 0 . . . 4.38 67.24 44 5.05 No 33 1.07 Yes 0 0 No -22 0.71 Yes 53 83.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190731642 + NM_000534 PMS1 0 . . . 8.4 84.58 18 6.04 Yes 24 0.73 No 0 0 No -30 0.56 No 40 43.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68982597 + NM_133509 RAD51B 0 . . . 3.87 88.29 15 5.38 No 60 1.45 Yes 0 0 No -57 0.31 No 49 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68778390 + NM_133509 RAD51B 0 . . . 2.11 62.31 17 6.08 Yes 71 -6.28 No 0 0 No -16 0.7 Yes 30 48.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69043535 + NM_133509 RAD51B 0 . . . 5.21 78.78 10 5.29 No 43 -3.06 No 0 0 No -29 0.29 No 38 58.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6015016 - NM_000535 PMS2 0 . . . 4.67 65.76 23 4.69 No 70 1.18 Yes 0 0 No -22 0.62 No 49 49.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41244453 - NM_007294 BRCA1 0 . . . 0.65 60.2 16 4.69 No 73 -5.88 No 0 0 No -37 0.56 No 63 26.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68316502 + NM_133509 RAD51B 0 . . . 5.21 75.36 20 5.1 No 45 1.51 Yes 0 0 No -22 0.52 No 36 80.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94174215 - NM_005591 MRE11 0 . . . 8.11 89.12 12 4.24 No 73 -4.27 No 0 0 No -34 0.91 Yes 48 56.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68576338 + NM_133509 RAD51B 0 . . . 10.43 92.8 25 5.39 No 6 0.4 No 0 0 No -22 0.72 Yes 47 58.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89625332 + NM_000314 PTEN 0 . . . 3.96 85.48 27 5.29 No 74 1.94 Yes 0 0 No -26 0.42 No 48 53.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6028076 - NM_000535 PMS2 0 . . . 3.84 77.1 31 5.54 No 8 1.11 Yes 0 0 No -30 0.55 No 37 63.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59894181 - NM_032043 BRIP1 0 . . . 1.73 81 27 5.55 No 44 0.66 No 0 0 No -26 0.57 No 49 83.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105198330 + NM_021930 RINT1 0 . . . 2.56 63.45 12 5.34 No 12 0.52 No 0 0 No -15 0.32 No 33 70.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41250966 - NM_007294 BRCA1 0 . . . 1.29 74.68 12 5.31 No 70 1.08 Yes 0 0 No -15 0.44 No 54 51.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68351149 + NM_133509 RAD51B 0 . . . 5.36 80.81 30 5.56 Yes 61 1.04 Yes 0 0 No -29 0.44 No 42 77.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94171518 - NM_005591 MRE11 0 . . . 3.4 63.03 43 4.89 No 51 -4.36 No 0 0 No -27 0.42 No 47 29.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59912681 - NM_032043 BRIP1 0 . . . 6.74 75.91 17 5.74 Yes 54 0.06 No 0 0 No -24 0.6 No 45 87.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68838261 + NM_133509 RAD51B 0 . . . 2.42 71.75 33 5.17 No 70 -3.71 No 0 0 No -24 0.48 No 42 21.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68454865 + NM_133509 RAD51B 0 . . . 2.93 66.01 13 4.4 No 56 -2.47 No 0 0 No -18 0.34 No 45 71.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190709256 + NM_000534 PMS1 0 . . . 0.1 74.68 24 4.9 No 53 0.64 No 0 0 No -21 0.7 Yes 52 60.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7572897 - NM_000546 TP53 0 . . . 6.78 80.56 36 6.73 Yes 19 1.97 Yes 0 0 No -23 0.58 No 39 92.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32967568 + NM_000059 BRCA2 0 . . . 10.87 97.77 27 5.57 Yes 12 0.25 No 0 0 No -26 0.89 Yes 46 86.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68703901 + NM_133509 RAD51B 0 . . . 0.07 0 16 6.26 Yes 7 0.41 No 0 0 No -21 0.42 No 42 83.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47726936 + NM_000251 MSH2 0 . . . 1.54 73.88 31 6.4 Yes -4 1.3 Yes 0 0 No -23 0.6 No 25 81.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131971620 + NM_005732 RAD50 0 . . . 2.48 70.56 16 4.69 No 67 -3.64 No 0 0 No -20 0.64 No 41 55.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68295980 + NM_133509 RAD51B 0 . . . 2.53 84.41 14 5 No 54 0.78 Yes 0 0 No -20 0.3 No 32 83.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47685856 + NM_000251 MSH2 0 . . . 1.96 80.12 9 3.87 No 7 1.16 Yes 0 0 No -41 0.93 Yes 51 84.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94193632 - NM_005591 MRE11 0 . . . 3.89 75.16 21 5.02 No 40 1.4 Yes 0 0 No -20 0.56 No 44 60.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29137342 - NM_001005735 CHEK2 0 . . . 1.67 62.05 32 7.34 Yes 61 -4.61 No 0 0 No -31 0.74 Yes 43 48.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59773461 - NM_032043 BRIP1 0 . . . 1.92 70.68 19 4.79 No 8 0.3 No 0 0 No -34 0.37 No 49 58.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29101616 - NM_001005735 CHEK2 0 . . . 5.22 80.61 16 6.59 Yes 75 1.59 Yes 0 0 No -30 0.69 Yes 41 60.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94204782 - NM_005591 MRE11 0 . . . 0.77 60.67 24 5.48 No 76 1.04 Yes 0 0 No -26 0.63 No 42 51.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215671049 - NM_000465 BARD1 0 . . . 6.26 89.42 29 6.33 Yes 73 0.16 No 0 0 No -28 0.79 Yes 38 41.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68778490 + NM_133509 RAD51B 0 . . . 1.44 74.68 26 5.48 No 53 0.64 No 0 0 No -25 0.93 Yes 52 63.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90983729 - NM_002485 NBN 0 . . . 5.87 66.05 20 6.15 Yes 54 0.86 Yes 0 0 No -19 0.61 No 42 86.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68733304 + NM_133509 RAD51B 0 . . . 3.01 79.79 47 4.32 No 46 1.66 Yes 0 0 No -23 0.6 No 46 67.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68769855 + NM_133509 RAD51B 0 . . . 2.37 67.04 29 5.25 No 75 0.07 No 0 0 No -21 0.57 No 43 45.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131913691 + NM_005732 RAD50 0 . . . 1.47 77.63 33 4.47 No 7 1.16 Yes 0 0 No -28 0.45 No 51 86.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68691322 + NM_133509 RAD51B 0 . . . 1.26 63.3 47 6.85 Yes 61 0.7 No 0 0 No -24 0.75 Yes 39 42.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90988806 - NM_002485 NBN 0 . . . 4.77 77.68 23 4.26 No -2 0.09 No 0 0 No -22 0.48 No 45 69.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215652159 - NM_000465 BARD1 0 . . . 2.2 68.77 57 6.15 Yes 75 0.31 No 0 0 No -34 0.82 Yes 49 72.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41258490 - NM_007294 BRCA1 0 . . . 0.88 71.91 16 4.69 No 36 1.11 Yes 0 0 No -18 0.35 No 51 89.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41279401 - NM_007294 BRCA1 0 . . . 0.14 0 24 6.24 Yes 44 0.48 No 0 0 No -23 0.81 Yes 14 56.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89715650 + NM_000314 PTEN 0 . . . 1.64 66.28 38 6.24 Yes 7 0.83 Yes 0 0 No -25 0.69 Yes 51 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215619784 - NM_000465 BARD1 0 . . . 0.37 75.97 14 5.46 No 3 1.49 Yes 0 0 No -23 0.43 No 49 51.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21990113 - NM_000077 CDKN2A 0 . . . 0.05 0 20 5.57 Yes 0 -1.14 No 0 0 No -19 0.73 Yes 44 67.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32917229 + NM_000059 BRCA2 0 . . . 2.03 0 28 4.99 No 32 -2.53 No 0 0 No -27 0.88 Yes 44 78.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68796698 + NM_004360 CDH1 0 . . . 1.12 74.47 25 4.91 No 76 -5.66 No 0 0 No -22 0.32 No 36 37.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29117541 - NM_001005735 CHEK2 0 . . . 3.47 82.95 26 5.18 No 4 1.55 Yes 0 0 No -29 0.82 Yes 54 75.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68985261 + NM_133509 RAD51B 0 . . . 1.73 73.44 9 3.87 No 58 -4.26 No 0 0 No -30 0.47 No 52 49.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89633157 + NM_000314 PTEN 0 . . . 2.11 74.13 37 5.01 No 49 1.45 Yes 0 0 No -36 0.44 No 50 31.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59873313 - NM_032043 BRIP1 0 . . . 2.55 78.56 24 5.83 Yes 40 0.68 No 0 0 No -20 0.23 No 47 90.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48009694 + NM_000179 MSH6 0 . . . 1.88 66.64 26 5.98 Yes 70 -6.21 No 0 0 No -25 0.6 No 42 70.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59754717 - NM_032043 BRIP1 0 . . . 6.23 73.76 13 5.09 No 8 0.98 Yes 0 0 No -19 0.49 No 50 70.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68484986 + NM_133509 RAD51B 0 . . . 7.09 83.6 28 5.83 Yes 21 0.73 No 0 0 No -27 0.93 Yes 37 68.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1223216 + NM_000455 STK11 0 . . . 3.22 75 17 5.02 No -2 1.2 Yes 0 0 No -27 0.45 No 60 48.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68717305 + NM_133509 RAD51B 0 . . . 4 82.71 21 4.69 No 75 -1.2 No 0 0 No -20 0.91 Yes 50 56.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105207324 + NM_021930 RINT1 0 . . . 3.63 0 18 7.35 Yes 70 0.33 No 0 0 No -36 0.66 Yes 50 82.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33437907 - NM_002878 RAD51D 0 . . . 6.24 82.31 28 5.76 Yes 57 1.3 Yes 0 0 No -27 0.91 Yes 15 45.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68633161 + NM_133509 RAD51B 0 . . . 8.29 80.33 20 5.09 No 10 1.26 Yes 0 0 No -28 0.48 No 48 68.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68872369 + NM_133509 RAD51B 0 . . . 0.67 68.92 26 5.2 No 48 1.25 Yes 0 0 No -25 0.89 Yes 54 51.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37043330 + NM_000249 MLH1 0 . . . 3.9 85.45 13 5.1 No 20 1.44 Yes 0 0 No -22 0.76 Yes 42 90.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68631729 + NM_133509 RAD51B 0 . . . 3.81 74.04 12 5.74 Yes 3 1.6 Yes 0 0 No -22 0.24 No 42 56.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56810358 + NM_058216 RAD51C 0 . . . 5.63 71.57 40 5.74 Yes 54 0.9 Yes 0 0 No -57 0.44 No 48 49.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190669848 + NM_000534 PMS1 0 . . . 0.04 50.64 40 7.27 Yes 52 1.07 Yes 0 0 No -34 0.67 Yes 33 94.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108176781 + NM_000051 ATM 0 . . . 0.9 77.52 45 7.53 Yes 41 1.55 Yes 0 0 No -44 0.75 Yes 17 70.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23627665 - NM_024675 PALB2 0 . . . 4.39 74.07 41 7.65 Yes 31 0.42 No 0 0 No -28 0.48 No 14 48.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56807034 + NM_058216 RAD51C 0 . . . 2.11 71.26 24 6.02 Yes 59 1.47 Yes 0 0 No -23 0.67 Yes 47 63.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23628402 - NM_024675 PALB2 0 . . . 0.09 74.68 12 5.09 No 38 0.7 No 0 0 No -24 0.69 Yes 54 76.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68610619 + NM_133509 RAD51B 0 . . . 1.41 61.14 18 6.08 Yes 13 1.63 Yes 0 0 No -21 0.94 Yes 45 93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94148549 - NM_005591 MRE11 0 . . . 1.28 76.14 33 5.7 Yes 58 1.12 Yes 0 0 No -26 0.68 Yes 50 45.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69026192 + NM_133509 RAD51B 0 . . . 6.14 88.68 30 5.56 Yes 9 1.13 Yes 0 0 No -29 0.78 Yes 49 93.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190701421 + NM_000534 PMS1 0 . . . 3.75 78.9 34 5.87 Yes 70 0.73 No 0 0 No -33 0.66 No 47 64.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215620250 - NM_000465 BARD1 0 . . . 4.03 82.44 26 6.48 Yes 22 0.86 Yes 0 0 No -25 0.69 Yes 41 73.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6032970 - NM_000535 PMS2 0 . . . 0.16 0 32 4.29 No 66 1.94 Yes 0 0 No -27 0.91 Yes 12 11.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59932521 - NM_032043 BRIP1 0 . . . 3.84 68.75 78 8.47 Yes 2 0.3 No 0 0 No -32 0.68 Yes 32 54.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89724828 + NM_000314 PTEN 0 . . . 4.87 65.89 70 8.51 Yes 0 0.15 No 0 0 No -29 0.59 No 44 32.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68503057 + NM_133509 RAD51B 0 . . . 3.61 72.89 31 6.05 Yes 9 1.39 Yes 0 0 No -18 0.45 No 49 79.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37076589 + NM_000249 MLH1 0 . . . 5.26 85.25 17 3.47 No 28 0.94 Yes 0 0 No -16 0.38 No 44 46.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68413130 + NM_133509 RAD51B 0 . . . 3.09 76.74 27 6.16 Yes 0 1.44 Yes 0 0 No -26 0.89 Yes 46 53.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68520796 + NM_133509 RAD51B 0 . . . 0.13 65.27 20 3.99 No 58 0.89 Yes 0 0 No -28 0.85 Yes 38 74.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68758697 + NM_133509 RAD51B 0 . . . 8.47 78.69 25 5.39 No 9 1.06 Yes 0 0 No -22 0.78 Yes 49 73.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105198086 + NM_021930 RINT1 0 . . . 5.34 81.44 27 4.83 No 61 -4.75 No 0 0 No -26 0.81 Yes 47 71.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105178707 + NM_021930 RINT1 0 . . . 3.84 65.17 44 7 Yes 27 1.2 Yes 0 0 No -43 0.52 No 31 80.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69124761 + NM_133509 RAD51B 0 . . . 3.64 84.53 51 5.8 Yes 54 1 Yes 0 0 No -29 0.63 No 48 79.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190702045 + NM_000534 PMS1 0 . . . 1.43 0 16 3.48 No 16 1.21 Yes 0 0 No -21 0.68 Yes 42 93.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68391135 + NM_133509 RAD51B 0 . . . 0.38 0 27 5.79 Yes 17 1.37 Yes 0 0 No -25 0.34 No 41 67.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68803595 + NM_133509 RAD51B 0 . . . 2.22 55.4 16 4.81 No 33 2.01 Yes 0 0 No -45 0.49 No 25 85.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59802639 - NM_032043 BRIP1 0 . . . 0.77 79.46 18 5.29 No -3 0.64 No 0 0 No -17 0.58 No 53 26.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68631688 + NM_133509 RAD51B 0 . . . 8.06 95.86 20 5 No 22 0.11 No 0 0 No -19 0.59 No 46 51.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68661010 + NM_133509 RAD51B 0 . . . 2.44 65.47 44 8.04 Yes 1 0.21 No 0 0 No -33 0.74 Yes 51 50.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68443943 + NM_133509 RAD51B 0 . . . 6.19 79.29 18 4.67 No 26 1.5 Yes 0 0 No -17 0.43 No 32 84.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90997626 - NM_002485 NBN 0 . . . 7.29 87.16 12 5.57 Yes 35 1.13 Yes 0 0 No -24 0.48 No 42 67.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94186889 - NM_005591 MRE11 0 . . . 0.61 64.51 56 7.25 Yes 72 -5.86 No 0 0 No -24 0.33 No 51 30.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41210219 - NM_007294 BRCA1 0 . . . 8.29 86.16 16 3.55 No 74 0.81 Yes 0 0 No -33 0.63 No 46 85.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68922562 + NM_133509 RAD51B 0 . . . 4.2 68.74 24 5.19 No 18 0.82 Yes 0 0 No -54 0.86 Yes 33 91.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94195705 - NM_005591 MRE11 0 . . . 5.38 78.04 19 5.15 No 61 0.91 Yes 0 0 No -22 0.43 No 44 70.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215600317 - NM_000465 BARD1 0 . . . 2.97 72.28 22 5.07 No 23 0.04 No 0 0 No -21 0.37 No 56 33.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105175631 + NM_021930 RINT1 0 . . . 5.78 74.32 29 5.29 No 17 1.25 Yes 0 0 No -28 0.82 Yes 41 85.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68581273 + NM_133509 RAD51B 0 . . . 4.78 73.92 34 6.68 Yes 41 0.33 No 0 0 No -33 0.62 No 43 39.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131932952 + NM_005732 RAD50 0 . . . 2.56 74.8 34 6.21 Yes 68 -5.01 No 0 0 No -33 0.91 Yes 49 72.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68562990 + NM_133509 RAD51B 0 . . . 2.54 82.14 21 5.78 Yes 60 1.44 Yes 0 0 No -29 0.61 No 48 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32943829 + NM_000059 BRCA2 0 . . . 0.14 84.22 20 5.07 No 33 1.34 Yes 0 0 No -19 0.55 No 25 44.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68386881 + NM_133509 RAD51B 0 . . . 6.12 76.76 23 5.19 No 62 0.04 No 0 0 No -22 0.75 Yes 55 33.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41235439 - NM_007294 BRCA1 0 . . . 3.32 80.47 14 4.47 No 65 0.49 No 0 0 No -28 0.42 No 44 53.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69076627 + NM_133509 RAD51B 0 . . . 4.7 86.68 24 5.48 No 0 1.35 Yes 0 0 No -23 0.68 Yes 42 91.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190727589 + NM_000534 PMS1 0 . . . 2.44 67.41 31 4.17 No 66 0.16 No 0 0 No -24 0.61 No 37 56.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68934673 + NM_133509 RAD51B 0 . . . 0.77 75.58 24 6 Yes 40 0.29 No 0 0 No -31 0.6 No 47 69.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41225903 - NM_007294 BRCA1 0 . . . 1.16 63.71 12 4.99 No 55 0.64 No 0 0 No -29 0.34 No 49 52.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68667585 + NM_133509 RAD51B 0 . . . 2.67 82.27 29 9.76 Yes 37 1.2 Yes 0 0 No -28 0.85 Yes 21 83.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7578675 - NM_000546 TP53 0 . . . 2.93 74.38 16 4.88 No 63 0.41 No 0 0 No -25 0.46 No 53 44.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59843478 - NM_032043 BRIP1 0 . . . 3.73 69.41 39 8.41 Yes 41 1.09 Yes 0 0 No -38 0.45 No 44 72.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68637070 + NM_133509 RAD51B 0 . . . 3.08 59.07 17 6.4 Yes 68 1.12 Yes 0 0 No -16 0.78 Yes 47 46.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108115555 + NM_000051 ATM 0 . . . 2.71 81.55 41 6.63 Yes 50 0.5 No 0 0 No -40 0.7 Yes 47 87.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68909054 + NM_133509 RAD51B 0 . . . 7.83 84.2 31 6 Yes 10 0.37 No 0 0 No -30 0.52 No 48 76.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23622074 - NM_024675 PALB2 0 . . . 1.8 66.03 24 5.79 Yes 60 1.26 Yes 0 0 No -23 0.64 No 50 40.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108203942 + NM_000051 ATM 0 . . . 0.55 68.57 81 8.51 Yes 3 1.03 Yes 0 0 No -30 0.83 Yes 47 34.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68650128 + NM_133509 RAD51B 0 . . . 7.71 80.51 13 5.1 No 25 0.5 No 0 0 No -26 0.43 No 41 63.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108120514 + NM_000051 ATM 0 . . . 1.04 57.81 36 7.07 Yes 29 0.44 No 0 0 No -35 0.73 Yes 29 78.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52435082 - NM_004656 BAP1 0 . . . 1.29 76.79 16 6.28 Yes -2 1.52 Yes 0 0 No -24 0.56 No 49 83.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89643956 + NM_000314 PTEN 0 . . . 2.38 0 23 4.8 No 33 0.12 No 0 0 No -51 0.95 Yes 32 64.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89671888 + NM_000314 PTEN 0 . . . 1.94 75.18 26 5.19 No 33 1.01 Yes 0 0 No -25 0.79 Yes 25 63.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69087429 + NM_133509 RAD51B 0 . . . 3.21 76.42 15 5 No 6 1.37 Yes 0 0 No -43 0.63 No 41 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37038942 + NM_000249 MLH1 0 . . . 2.19 0 45 8.56 Yes 62 0.88 Yes 0 0 No -31 0.71 Yes 56 30.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68483415 + NM_133509 RAD51B 0 . . . 3.15 68.94 19 5.38 No 7 1.56 Yes 0 0 No -22 0.74 Yes 51 92.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1208327 + NM_000455 STK11 0 . . . 3.97 84.41 25 6.29 Yes 48 1.87 Yes 0 0 No -24 0.81 Yes 41 96.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89716641 + NM_000314 PTEN 0 . . . 6.66 83.9 25 6.5 Yes 50 1.16 Yes 0 0 No -27 0.65 No 44 96.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94197374 - NM_005591 MRE11 0 . . . 2.87 83.57 11 5.24 No 42 0.54 No 0 0 No -23 0.75 Yes 47 92.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69083974 + NM_133509 RAD51B 0 . . . 0.15 79.65 29 7.05 Yes 76 0.58 No 0 0 No -25 0.33 No 48 97.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68933854 + NM_133509 RAD51B 0 . . . 3.45 80.2 27 7.14 Yes 37 0.82 Yes 0 0 No -26 0.64 No 49 89.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68592614 + NM_133509 RAD51B 0 . . . 4.64 68.55 22 6.16 Yes 14 0.65 No 0 0 No -21 0.92 Yes 50 74.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68835490 + NM_133509 RAD51B 0 . . . 0.64 65.1 38 6.63 Yes 21 1.02 Yes 0 0 No -28 0.61 No 37 51.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68756889 + NM_133509 RAD51B 0 . . . 7.75 83.06 52 7.88 Yes 65 -3.38 No 0 0 No -47 0.64 No 46 53.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68618162 + NM_133509 RAD51B 0 . . . 6.48 73.38 18 6.37 Yes 62 1.38 Yes 0 0 No -40 0.44 No 45 88.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215673069 - NM_000465 BARD1 0 . . . 3.35 70.08 67 8.79 Yes -4 0.72 No 0 0 No -27 0.53 No 43 74.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1215549 + NM_000455 STK11 0 . . . 6.08 82.45 37 5.41 No 52 1.07 Yes 0 0 No -23 0.48 No 50 57.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56811100 + NM_058216 RAD51C 0 . . . 1.55 83.78 31 6.62 Yes 25 0.22 No 0 0 No -30 0.88 Yes 48 68.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68468315 + NM_133509 RAD51B 0 . . . 4.28 78.28 21 4.31 No 75 1.08 Yes 0 0 No -20 0.64 No 49 67.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68847148 + NM_133509 RAD51B 0 . . . 0.25 0 16 4.57 No 39 0.99 Yes 0 0 No -25 0.19 No 45 70.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68754884 + NM_133509 RAD51B 0 . . . 6.61 78.25 27 5.39 No 32 0.61 No 0 0 No -26 0.54 No 44 62.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59928862 - NM_032043 BRIP1 0 . . . 1.13 68.24 24 5.4 No 49 0.15 No 0 0 No -28 0.49 No 45 24.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52438083 - NM_004656 BAP1 0 . . . 1.26 75.01 18 4.35 No 5 -1.61 No 0 0 No -44 0.91 Yes 53 41.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6028017 - NM_000535 PMS2 0 . . . 4.02 80.12 36 5.74 Yes 12 1.52 Yes 0 0 No -35 0.94 Yes 46 92.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104177121 - NM_001100119 XRCC3 0 . . . 6.3 75.12 28 6.4 Yes 53 0.56 No 0 0 No -27 0.61 No 48 56.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47635694 + NM_000251 MSH2 0 . . . 0.92 70.19 37 5.84 Yes 65 -5.44 No 0 0 No -29 0.52 No 44 32.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68706900 + NM_133509 RAD51B 0 . . . 6.61 93.23 14 3.39 No 76 0.42 No 0 0 No -17 0.73 Yes 46 77.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59857081 - NM_032043 BRIP1 0 . . . 0.47 77.6 29 7.14 Yes 3 0.83 Yes 0 0 No -28 0.93 Yes 50 70.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23654074 - NM_024675 PALB2 0 . . . 0.6 74.68 20 4.06 No 17 0.12 No 0 0 No -19 0.45 No 41 68.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41196135 - NM_007294 BRCA1 0 . . . 0.16 67.3 12 6.08 Yes 74 0.57 No 0 0 No -30 0.65 No 27 55.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799322 + NM_058216 RAD51C 0 . . . 9.49 88.66 31 6.04 Yes 1 0.59 No 0 0 No -31 0.54 No 47 83.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59902481 - NM_032043 BRIP1 0 . . . 5.2 85.02 13 7.61 Yes 72 1.2 Yes 0 0 No -28 0.57 No 53 76.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68435407 + NM_133509 RAD51B 0 . . . 3.9 75.04 18 5.29 No 41 1.25 Yes 0 0 No -23 0.66 No 38 84.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68352847 + NM_133509 RAD51B 0 . . . 7.68 82.7 17 4.49 No 16 1.31 Yes 0 0 No -25 0.63 No 42 71.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68782873 + NM_004360 CDH1 0 . . . 2.5 66.72 24 5.17 No 45 1.13 Yes 0 0 No -25 0.52 No 39 44.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59921556 - NM_032043 BRIP1 0 . . . 1.13 74.47 44 7.48 Yes 46 1.43 Yes 0 0 No -41 0.49 No 47 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59852109 - NM_032043 BRIP1 0 . . . 7.43 84.83 34 5.92 Yes 46 0.94 Yes 0 0 No -33 0.91 Yes 47 63.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89636139 + NM_000314 PTEN 0 . . . 1.95 76.47 30 5.55 No 4 0.71 No 0 0 No -25 0.68 Yes 40 75.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68820352 + NM_133509 RAD51B 0 . . . 2.06 72.11 15 4.58 No 65 -4.38 No 0 0 No -44 0.43 No 44 61.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59847163 - NM_032043 BRIP1 0 . . . 8.25 73.8 23 4.22 No 14 0.83 Yes 0 0 No -22 0.83 Yes 44 59.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52435516 - NM_004656 BAP1 0 . . . 3.52 71.56 29 6.36 Yes 4 -0.82 No 0 0 No -26 0.57 No 54 52.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69037940 + NM_133509 RAD51B 0 . . . 0.84 67.02 23 5.51 No 52 -3.54 No 0 0 No -22 0.62 No 47 71.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59853100 - NM_032043 BRIP1 0 . . . 4.54 82.62 15 4.58 No 69 -1.97 No 0 0 No -56 0.7 Yes 45 40.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89732407 + NM_000314 PTEN 0 . . . 4.1 0 23 4.99 No 70 -6.46 No 0 0 No -22 0.78 Yes 39 64.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47783453 + NM_000251 MSH2 0 . . . 5.05 80.95 18 5.71 Yes 14 0.3 No 0 0 No -25 0.79 Yes 44 65.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68372890 + NM_133509 RAD51B 0 . . . 8.83 85.4 51 7.76 Yes 47 0.44 No 0 0 No -29 0.75 Yes 48 87.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68365080 + NM_133509 RAD51B 0 . . . 4.68 72.82 22 4.9 No 4 0.42 No 0 0 No -21 0.9 Yes 51 83.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108202797 + NM_000051 ATM 0 . . . 0.33 68.91 16 4.69 No 44 0.69 No 0 0 No -28 0.36 No 49 62.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41008879 + NM_001164269 RAD51 0 . . . 4.74 84.41 32 5.58 Yes 75 1.46 Yes 0 0 No -31 0.77 Yes 41 78.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69066480 + NM_133509 RAD51B 0 . . . 3.45 81.25 45 6.25 Yes 48 0.5 No 0 0 No -44 0.73 Yes 44 68.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33437296 - NM_002878 RAD51D 0 . . . 0.07 58.07 35 6.38 Yes 38 -3.38 No 0 0 No -34 0.77 Yes 47 36.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59890053 - NM_032043 BRIP1 0 . . . 4.53 75.94 15 5.21 No 35 -2.5 No 0 0 No -25 0.52 No 48 70.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108163236 + NM_000051 ATM 0 . . . 1.11 77.04 18 5.43 No 37 1.6 Yes 0 0 No -24 0.42 No 43 77.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47640514 + NM_000251 MSH2 0 . . . 2.42 78.21 19 5 No 31 1.15 Yes 0 0 No -18 0.43 No 16 38.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68800816 + NM_004360 CDH1 0 . . . 3.25 80.12 34 5.24 No 8 1.17 Yes 0 0 No -37 0.54 No 50 66.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68407026 + NM_133509 RAD51B 0 . . . 6.24 82.31 32 6.08 Yes 58 1.16 Yes 0 0 No -31 0.74 Yes 43 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90966823 - NM_002485 NBN 0 . . . 6.47 84.84 41 5.87 Yes 43 2.02 Yes 0 0 No -25 0.4 No 44 64.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131942001 + NM_005732 RAD50 0 . . . 8.18 78.42 26 5.99 Yes 4 0.15 No 0 0 No -25 0.55 No 42 48.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68981253 + NM_133509 RAD51B 0 . . . 2.31 66.06 40 6.36 Yes 52 0.58 No 0 0 No -39 0.77 Yes 14 40.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68977226 + NM_133509 RAD51B 0 . . . 4.66 76.43 20 5.1 No 65 -2.63 No 0 0 No -27 0.72 Yes 50 82.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47795704 + NM_000251 MSH2 0 . . . 1.92 63.74 37 5.42 No 69 -4.22 No 0 0 No -32 0.43 No 47 83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37034377 + NM_000249 MLH1 0 . . . 2.85 68.71 33 5.82 Yes 43 1.89 Yes 0 0 No -32 0.45 No 45 38.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68599828 + NM_133509 RAD51B 0 . . . 4.54 72.17 42 6.4 Yes 76 -1.94 No 0 0 No -34 0.37 No 47 57.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131893177 + NM_005732 RAD50 0 . . . 2.9 0 9 4.36 No 17 0.37 No 0 0 No -29 0.31 No 48 81.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84403669 - NM_139076 FAM175A 0 . . . 2.84 81.75 85 5.34 No 36 1.65 Yes 0 0 No -39 0.76 Yes 18 81.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104174764 - NM_001100119 XRCC3 0 . . . 0.02 0 13 4.77 No 51 -3.18 No 0 0 No -36 0.62 No 64 31.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47787462 + NM_000251 MSH2 0 . . . 1.88 0 23 3.74 No 70 -2.31 No 0 0 No -23 0.69 Yes 35 32.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48024443 + NM_000179 MSH6 0 . . . 9.25 82.14 40 8.06 Yes 22 0.94 Yes 0 0 No -39 0.81 Yes 36 49.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68716074 + NM_133509 RAD51B 0 . . . 0.17 67.42 37 6.93 Yes -3 0.17 No 0 0 No -36 0.76 Yes 45 43.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89656168 + NM_000314 PTEN 0 . . . 3.35 65.15 21 5.74 Yes 64 -2.24 No 0 0 No -18 0.43 No 47 74.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68778083 + NM_004360 CDH1 0 . . . 2.41 72.57 42 6.28 Yes 42 0.5 No 0 0 No -35 0.4 No 23 47.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215607462 - NM_000465 BARD1 0 . . . 4.49 80.9 19 4.46 No 60 0.45 No 0 0 No -60 0.76 Yes 45 79.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56786796 + NM_058216 RAD51C 0 . . . 6.01 79.37 19 4.35 No 39 0.43 No 0 0 No -27 0.49 No 44 45.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7590833 - NM_000546 TP53 0 . . . 2.56 69.2 24 5.48 No 23 0.38 No 0 0 No -24 0.41 No 35 88.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69108325 + NM_133509 RAD51B 0 . . . 0.43 79.64 22 5 No 69 0.6 No 0 0 No -30 0.65 No 48 53.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32968445 + NM_000059 BRCA2 0 . . . 3.41 77.97 23 5.2 No 46 1.64 Yes 0 0 No -22 0.97 Yes 48 74.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90997929 - NM_002485 NBN 0 . . . 4.87 71.81 23 4.37 No 50 0.48 No 0 0 No -22 0.64 No 44 42.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59942491 - NM_032043 BRIP1 0 . . . 2.76 84.41 23 4.2 No 6 0.6 No 0 0 No -22 0.61 No 42 95.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68808731 + NM_004360 CDH1 0 . . . 3.86 74.49 44 7.74 Yes 20 -1.62 No 0 0 No -31 0.46 No 46 62.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215595734 - NM_000465 BARD1 0 . . . 5.16 68.68 29 5.29 No 8 0.82 Yes 0 0 No -28 0.56 No 50 48.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190734669 + NM_000534 PMS1 0 . . . 4.26 90.16 17 4.58 No 62 1.22 Yes 0 0 No -20 0.43 No 46 63.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69132331 + NM_133509 RAD51B 0 . . . 2.01 75.19 14 4.8 No 55 -2.9 No 0 0 No -24 0.6 No 47 92.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41201354 - NM_007294 BRCA1 0 . . . 3.93 76.4 18 4.53 No 18 0.71 No 0 0 No -26 0.84 Yes 44 82.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215602912 - NM_000465 BARD1 0 . . . 4 77.21 31 5.83 Yes 16 0.45 No 0 0 No -30 0.61 No 42 80.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68483488 + NM_133509 RAD51B 0 . . . 0.45 71.54 28 4.04 No 72 1.18 Yes 0 0 No -21 0.28 No 51 74.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108240785 + NM_000051 ATM 0 . . . 1.96 69.09 29 6.48 Yes 64 1.61 Yes 0 0 No -28 0.92 Yes 53 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48035005 + NM_000179 MSH6 0 . . . 4.37 66.89 55 4.76 No 75 -2.89 No 0 0 No -23 0.54 No 42 82.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59755168 - NM_032043 BRIP1 0 . . . 0.44 0 29 5.29 No 23 1.19 Yes 0 0 No -23 0.53 No 35 35.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131897005 + NM_005732 RAD50 0 . . . 3.08 78.96 52 7.21 Yes 33 0.63 No 0 0 No -38 0.74 Yes 44 70.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56807688 + NM_058216 RAD51C 0 . . . 0.87 68.06 18 4.9 No 47 0.74 No 0 0 No -17 0.78 Yes 48 73.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68523050 + NM_133509 RAD51B 0 . . . 3.25 80.12 18 4.34 No 8 1.2 Yes 0 0 No -29 0.73 Yes 50 87.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68459891 + NM_133509 RAD51B 0 . . . 3.45 72.16 18 5.83 Yes 76 0.28 No 0 0 No -26 0.38 No 47 52.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69048888 + NM_133509 RAD51B 0 . . . 0.23 57.28 80 8.95 Yes 69 -5.48 No 0 0 No -29 0.74 Yes 50 28.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47646385 + NM_000251 MSH2 0 . . . 3.45 85.02 18 5.9 Yes 3 1.16 Yes 0 0 No -23 0.4 No 44 52.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84407723 - NM_139076 FAM175A 0 . . . 1.9 67.17 27 3.86 No 21 1.38 Yes 0 0 No -26 0.75 Yes 37 75.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68684708 + NM_133509 RAD51B 0 . . . 0.96 0 25 7.92 Yes 42 -1.84 No 0 0 No -24 0.61 No 42 37.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59879384 - NM_032043 BRIP1 0 . . . 3.04 71.95 12 5.1 No 0 0.65 No 0 0 No -19 0.4 No 37 75.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89729540 + NM_000314 PTEN 0 . . . 0.02 65.49 16 6.47 Yes 57 -5.77 No 0 0 No -24 0.6 No 53 28.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47657215 + NM_000251 MSH2 0 . . . 4.11 84.41 41 7.28 Yes 35 1.58 Yes 0 0 No -40 0.79 Yes 44 77.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190653665 + NM_000534 PMS1 0 . . . 6.15 83.62 31 5.83 Yes 46 -2.35 No 0 0 No -20 0.66 No 46 49.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190704374 + NM_000534 PMS1 0 . . . 6.25 65.94 14 4.96 No 23 0.54 No 0 0 No -29 0.89 Yes 35 85.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6009781 - NM_000535 PMS2 0 . . . 0.98 73.53 25 5.2 No 4 0.41 No 0 0 No -24 0.83 Yes 54 90.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68990361 + NM_133509 RAD51B 0 . . . 5.86 77.84 19 5.48 No 72 1.25 Yes 0 0 No -18 0.68 Yes 42 65.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41211314 - NM_007294 BRCA1 0 . . . 1.85 80.12 32 7.13 Yes 7 1.45 Yes 0 0 No -31 0.58 No 51 90.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68437368 + NM_133509 RAD51B 0 . . . 4.26 72.94 15 4.47 No 15 1.9 Yes 0 0 No -38 0.37 No 43 96.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68773077 + NM_133509 RAD51B 0 . . . 5.8 68.66 18 5.47 No 54 1.35 Yes 0 0 No -26 0.44 No 34 77.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68454071 + NM_133509 RAD51B 0 . . . 3.26 81.06 20 5.1 No 29 1.75 Yes 0 0 No -23 0.81 Yes 49 87.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68453983 + NM_133509 RAD51B 0 . . . 0.94 75.13 16 4.69 No 7 0.59 No 0 0 No -21 0.28 No 42 43.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68834565 + NM_133509 RAD51B 0 . . . 1.91 76.38 26 5.5 No 21 -3.13 No 0 0 No -25 0.78 Yes 48 74.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40987278 + NM_001164269 RAD51 0 . . . 3.36 65.96 15 4.48 No 70 -3.94 No 0 0 No -28 0.44 No 51 61.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59810564 - NM_032043 BRIP1 0 . . . 5.79 86.15 39 5.86 Yes 5 1.32 Yes 0 0 No -30 0.3 No 53 90.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47643504 + NM_000251 MSH2 0 . . . 0.34 69.67 34 6.69 Yes 30 0.47 No 0 0 No -33 0.41 No 48 47.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41016971 + NM_001164269 RAD51 0 . . . 2.62 85.81 19 7.41 Yes 8 1.3 Yes 0 0 No -25 0.45 No 50 96.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41204646 - NM_007294 BRCA1 0 . . . 1.61 62.16 11 4.9 No 67 1.21 Yes 0 0 No -19 0.45 No 44 51.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105174751 + NM_021930 RINT1 0 . . . 4.93 82.31 20 4.03 No 58 1.16 Yes 0 0 No -26 0.45 No 55 57.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68371153 + NM_133509 RAD51B 0 . . . 3.02 74.86 19 5.04 No 71 1.11 Yes 0 0 No -24 0.6 No 38 75.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29113696 - NM_001005735 CHEK2 0 . . . 4.02 80.12 22 4.44 No 9 1.09 Yes 0 0 No -21 0.82 Yes 49 84.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68745325 + NM_133509 RAD51B 0 . . . 0.34 74.93 17 4.69 No 48 0.85 Yes 0 0 No -21 0.51 No 45 31.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69074158 + NM_133509 RAD51B 0 . . . 4.42 78.59 22 5.35 No 69 -1.74 No 0 0 No -22 0.67 Yes 23 64.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108095395 + NM_000051 ATM 0 . . . 4.54 73.18 22 5.2 No 27 1.13 Yes 0 0 No -21 0.8 Yes 46 84.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68735033 + NM_133509 RAD51B 0 . . . 5.78 72.6 21 6.38 Yes 74 -3.67 No 0 0 No -20 0.74 Yes 52 44.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47723725 + NM_000251 MSH2 0 . . . 6.87 89.76 14 5.47 No 54 -3.52 No 0 0 No -29 0.35 No 41 50.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47740228 + NM_000251 MSH2 0 . . . 3.1 68.26 24 5.48 No -1 0.48 No 0 0 No -23 0.67 Yes 46 35.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131904088 + NM_005732 RAD50 0 . . . 5.22 76.22 18 5.74 Yes 63 0.94 Yes 0 0 No -26 0.79 Yes 46 67.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68564841 + NM_133509 RAD51B 0 . . . 7.93 81.03 27 5.2 No 2 1.73 Yes 0 0 No -26 0.64 No 39 60.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108161429 + NM_000051 ATM 0 . . . 3.86 69.67 29 6.31 Yes 52 -3.97 No 0 0 No -28 0.89 Yes 46 31.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68584466 + NM_133509 RAD51B 0 . . . 0.26 63.87 34 7.23 Yes 50 1.17 Yes 0 0 No -28 0.84 Yes 47 43.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108128624 + NM_000051 ATM 0 . . . 1.76 83.28 19 8.72 Yes 24 0.91 Yes 0 0 No -18 0.61 No 39 81.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68725671 + NM_133509 RAD51B 0 . . . 0.15 58.19 50 5.12 No 48 -1.58 No 0 0 No -23 0.4 No 33 26.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131918576 + NM_005732 RAD50 0 . . . 0.41 0 28 5.65 Yes 39 -0.71 No 0 0 No -27 0.36 No 43 64.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68635352 + NM_133509 RAD51B 0 . . . 2.75 82.53 16 6.93 Yes 40 0.2 No 0 0 No -34 0.79 Yes 32 44.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152361446 - NM_005431 XRCC2 0 . . . 1.77 69.21 17 6.92 Yes 31 1.2 Yes 0 0 No -41 0.69 Yes 15 56.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108127670 + NM_000051 ATM 0 . . . 3.25 66.58 32 6.53 Yes 73 -2.75 No 0 0 No -31 0.74 Yes 46 63.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68398402 + NM_133509 RAD51B 0 . . . 5.2 85.02 17 4.69 No 5 1.23 Yes 0 0 No -19 0.59 No 53 79.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68415806 + NM_133509 RAD51B 0 . . . 1.48 77 26 5.66 Yes -3 1.23 Yes 0 0 No -25 0.81 Yes 44 40.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52441101 - NM_004656 BAP1 0 . . . 2.95 72.84 15 5.79 Yes 14 -1.43 No 0 0 No -15 0.43 No 44 94.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84403664 - NM_139076 FAM175A 0 . . . 0.93 0 34 6.29 Yes 41 1.65 Yes 0 0 No -33 0.36 No 13 79.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68501796 + NM_133509 RAD51B 0 . . . 2.44 80.05 11 5.19 No 30 1.37 Yes 0 0 No -43 0.72 Yes 28 48.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47784598 + NM_000251 MSH2 0 . . . 2.21 64.99 26 4.96 No 36 0.74 No 0 0 No -25 0.87 Yes 31 81.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56804901 + NM_058216 RAD51C 0 . . . 8.13 85.7 30 5.56 Yes 64 1.31 Yes 0 0 No -29 0.87 Yes 44 49.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69144506 + NM_133509 RAD51B 0 . . . 3.16 80.42 28 5.49 No 59 -4.35 No 0 0 No -22 0.57 No 46 46.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37085135 + NM_000249 MLH1 0 . . . 3.35 80.59 28 5.24 No 50 1.45 Yes 0 0 No -22 0.59 No 49 69.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68856305 + NM_133509 RAD51B 0 . . . 4.93 71.62 28 5.83 Yes 7 1.38 Yes 0 0 No -27 0.92 Yes 45 95.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23637299 - NM_024675 PALB2 0 . . . 1.27 82.92 46 6.21 Yes 37 1.48 Yes 0 0 No -31 0.89 Yes 45 82.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68720906 + NM_133509 RAD51B 0 . . . 3.96 83.73 20 5.98 Yes 43 0.22 No 0 0 No -19 0.71 Yes 40 70.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68413680 + NM_133509 RAD51B 0 . . . 3.1 69.27 20 5.47 No 60 -3.49 No 0 0 No -23 0.48 No 39 35.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68969877 + NM_133509 RAD51B 0 . . . 0.37 0 20 5.56 Yes 53 0.61 No 0 0 No -19 0.55 No 33 62.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89659306 + NM_000314 PTEN 0 . . . 4.3 66.41 28 4.99 No 2 0.71 No 0 0 No -27 0.68 Yes 44 70.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84390760 - NM_139076 FAM175A 0 . . . 0.59 0 30 5.64 Yes 28 0.86 Yes 0 0 No -29 0.52 No 50 32.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68862648 + NM_004360 CDH1 0 . . . 5.53 79.92 27 4.25 No 69 0.28 No 0 0 No -26 0.76 Yes 39 47.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68777370 + NM_004360 CDH1 0 . . . 3.1 67.51 19 4.8 No 16 0.9 Yes 0 0 No -18 0.64 No 42 88.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59883453 - NM_032043 BRIP1 0 . . . 4.3 68.73 23 5.09 No 1 0.88 Yes 0 0 No -27 0.61 No 57 46.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68601227 + NM_133509 RAD51B 0 . . . 0.54 0 19 5.22 No 10 0.68 No 0 0 No -29 0.57 No 42 68.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89702319 + NM_000314 PTEN 0 . . . 3.69 76.69 13 4.47 No 50 0.32 No 0 0 No -15 0.33 No 52 75.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1210149 + NM_000455 STK11 0 . . . 3.34 77.61 21 4.88 No 71 0.83 Yes 0 0 No -18 0.46 No 29 71.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59937920 - NM_032043 BRIP1 0 . . . 2.1 84.22 21 5.1 No 76 1.47 Yes 0 0 No -20 0.76 Yes 50 72.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37082472 + NM_000249 MLH1 0 . . . 4.28 74.49 23 5.8 Yes 46 0.61 No 0 0 No -23 0.81 Yes 46 26.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68862559 + NM_133509 RAD51B 0 . . . 2.73 79.15 22 5.74 Yes 14 0.89 Yes 0 0 No -52 0.52 No 44 86.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68871081 + NM_133509 RAD51B 0 . . . 7.53 71.23 23 6.9 Yes -3 1.14 Yes 0 0 No -27 0.33 No 45 72.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94165649 - NM_005591 MRE11 0 . . . 6.05 78.32 23 4.62 No 6 0.71 No 0 0 No -22 0.57 No 52 86.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59758602 - NM_032043 BRIP1 0 . . . 7.84 82.59 14 4.89 No 4 1.06 Yes 0 0 No -17 0.77 Yes 42 48.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47673433 + NM_000251 MSH2 0 . . . 2.47 79.31 16 4.28 No 8 0.72 No 0 0 No -39 0.8 Yes 50 75.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59928112 - NM_032043 BRIP1 0 . . . 6.14 88.68 29 6.93 Yes 9 0.99 Yes 0 0 No -28 0.93 Yes 49 88.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108154471 + NM_000051 ATM 0 . . . 5.47 0 20 3.68 No 52 -3.83 No 0 0 No -19 0.65 No 47 58.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190647173 + NM_000534 PMS1 0 . . . 1.68 69.72 18 4.83 No 1 0.34 No 0 0 No -58 0.7 Yes 42 96.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190736728 + NM_000534 PMS1 0 . . . 4.6 70.94 24 4.79 No 62 -2.06 No 0 0 No -23 0.18 No 43 55.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47687454 + NM_000251 MSH2 0 . . . 8.84 93.1 22 4.9 No 5 0.64 No 0 0 No -47 0.66 No 49 96.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215601477 - NM_000465 BARD1 0 . . . 2.41 72.96 21 4.69 No 11 0.85 Yes 0 0 No -20 0.93 Yes 47 96.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131977794 + NM_005732 RAD50 0 . . . 2.94 68.97 31 8.24 Yes 19 1.2 Yes 0 0 No -30 0.74 Yes 48 51.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68933663 + NM_133509 RAD51B 0 . . . 4.89 72.44 21 5.74 Yes 23 0.98 Yes 0 0 No -26 0.71 Yes 43 53.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23635401 - NM_024675 PALB2 0 . . . 0.35 0 28 7.07 Yes 29 0.29 No 0 0 No -27 0.57 No 29 70.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68569110 + NM_133509 RAD51B 0 . . . 5.66 77.71 26 3.87 No 21 0.43 No 0 0 No -26 0.52 No 37 54.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59818789 - NM_032043 BRIP1 0 . . . 1.09 68.44 20 5.72 Yes 76 -6.33 No 0 0 No -27 0.72 Yes 41 57.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40999086 + NM_001164269 RAD51 0 . . . 7.29 87.04 12 4.24 No 4 1.26 Yes 0 0 No -26 0.33 No 47 58.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215660522 - NM_000465 BARD1 0 . . . 6.09 84.55 25 5.77 Yes 13 2.25 Yes 0 0 No -24 0.53 No 45 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59785184 - NM_032043 BRIP1 0 . . . 0.58 73.24 13 4.66 No 42 0.2 No 0 0 No -21 0.76 Yes 47 30.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68783758 + NM_133509 RAD51B 0 . . . 2.57 74.67 17 4.8 No 75 -6.43 No 0 0 No -16 0.21 No 49 93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131910337 + NM_005732 RAD50 0 . . . 3.03 64.23 20 5.07 No 35 0.18 No 0 0 No -24 0.67 Yes 34 88.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68953168 + NM_133509 RAD51B 0 . . . 6.19 73.82 14 5.37 No 17 0.59 No 0 0 No -22 0.61 No 41 90.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68724427 + NM_133509 RAD51B 0 . . . 6.49 87.21 23 4.8 No 12 0.16 No 0 0 No -22 0.91 Yes 46 77.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190715283 + NM_000534 PMS1 0 . . . 2.18 61.63 16 5.48 No 63 -5.07 No 0 0 No -25 0.39 No 48 69.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68992168 + NM_133509 RAD51B 0 . . . 0.37 0 25 5.67 Yes 71 0.38 No 0 0 No -33 0.62 No 32 75.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215592929 - NM_000465 BARD1 0 . . . 6.13 73.2 10 4.58 No 27 -3.49 No 0 0 No -25 0.46 No 35 49.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68840589 + NM_004360 CDH1 0 . . . 7.17 85.71 16 4.69 No 6 1.2 Yes 0 0 No -44 0.65 No 52 65.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59928235 - NM_032043 BRIP1 0 . . . 3.23 69.65 36 5.89 Yes 23 -4.09 No 0 0 No -35 0.6 No 53 42.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105188569 + NM_021930 RINT1 0 . . . 2.75 83.83 22 4.68 No 52 1.23 Yes 0 0 No -15 0.26 No 49 92.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215604327 - NM_000465 BARD1 0 . . . 6.32 80.28 15 4.1 No 11 0.85 Yes 0 0 No -50 0.34 No 47 75.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37081448 + NM_000249 MLH1 0 . . . 6.7 78.54 27 4.91 No 52 1.72 Yes 0 0 No -26 0.66 No 51 68.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59830626 - NM_032043 BRIP1 0 . . . 4.6 86.92 29 5.32 No 4 0.53 No 0 0 No -28 0.64 No 44 65.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68339234 + NM_133509 RAD51B 0 . . . 0.26 71.45 28 5.76 Yes 18 -2.57 No 0 0 No -27 0.82 Yes 49 46.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32911711 + NM_000059 BRCA2 0 . . . 5.81 80.73 29 5.73 Yes 71 -5.01 No 0 0 No -28 0.78 Yes 47 79.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215628156 - NM_000465 BARD1 0 . . . 2.59 0 14 3.69 No 46 0.48 No 0 0 No -22 0.78 Yes 36 89.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108238623 + NM_000051 ATM 0 . . . 1.28 83.8 15 4.58 No 61 0.58 No 0 0 No -43 0.72 Yes 48 68.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190728309 + NM_000534 PMS1 0 . . . 5.79 85.44 60 7.13 Yes 11 0.79 Yes 0 0 No -32 0.76 Yes 44 40.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40998190 + NM_001164269 RAD51 0 . . . 4.15 64.08 32 4.67 No 66 0.25 No 0 0 No -28 0.49 No 46 39.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68614755 + NM_133509 RAD51B 0 . . . 6.41 78.94 29 5.39 No 8 1.64 Yes 0 0 No -26 0.45 No 50 61.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68316210 + NM_133509 RAD51B 0 . . . 1.73 74.73 24 7.23 Yes 34 0.87 Yes 0 0 No -23 0.52 No 39 33.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84407943 - NM_139076 FAM175A 0 . . . 2.32 0 25 7.89 Yes -1 0.91 Yes 0 0 No -24 0.67 Yes 46 47.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68462375 + NM_133509 RAD51B 0 . . . 5.68 89.33 14 3.94 No 46 1.84 Yes 0 0 No -24 0.54 No 12 73.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1223436 + NM_000455 STK11 0 . . . 3.17 68.96 29 6.16 Yes 13 0.53 No 0 0 No -28 0.95 Yes 45 92.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131962584 + NM_005732 RAD50 0 . . . 0.18 82.72 23 7.94 Yes 38 0.38 No 0 0 No -33 0.51 No 35 82.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75485216 - NM_001040108 MLH3 0 . . . 3.22 0 30 7.77 Yes 41 0.96 Yes 0 0 No -29 0.79 Yes 47 78.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68890820 + NM_133509 RAD51B 0 . . . 8.13 84.84 40 6.24 Yes 3 1.97 Yes 0 0 No -30 0.47 No 45 75.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108196149 + NM_000051 ATM 0 . . . 3.84 73.22 56 7.48 Yes 27 0.68 No 0 0 No -28 0.61 No 43 53.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68636562 + NM_133509 RAD51B 0 . . . 2.31 68.47 19 5.44 No 12 1.19 Yes 0 0 No -24 0.69 Yes 43 52.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29135302 - NM_001005735 CHEK2 0 . . . 2.3 81.23 15 5.94 Yes 42 0.77 No 0 0 No -26 0.51 No 34 75.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89698802 + NM_000314 PTEN 0 . . . 3.07 0 23 8.12 Yes 41 0.73 No 0 0 No -22 0.67 Yes 55 38.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69131633 + NM_133509 RAD51B 0 . . . 0.79 83.15 16 5.07 No 16 0.21 No 0 0 No -20 0.67 Yes 42 59.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68868414 + NM_133509 RAD51B 0 . . . 3.64 84.49 33 5.82 Yes 68 1.25 Yes 0 0 No -32 0.72 Yes 53 49.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32947291 + NM_000059 BRCA2 0 . . . 0.58 68.4 47 6.78 Yes 41 1.37 Yes 0 0 No -24 0.58 No 48 71.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68805096 + NM_133509 RAD51B 0 . . . 2.73 0 19 4.88 No 43 0.19 No 0 0 No -18 0.44 No 37 79.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32911759 + NM_000059 BRCA2 0 . . . 5.12 76.45 13 5.2 No -3 0.33 No 0 0 No -28 0.36 No 46 58.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6049364 - NM_000535 PMS2 0 . . . 5.92 82.31 34 5.57 Yes 72 0.72 No 0 0 No -26 0.62 No 48 58.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41006292 + NM_001164269 RAD51 0 . . . 0.72 0 36 5.52 No 25 0.76 No 0 0 No -25 0.59 No 51 52.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68506982 + NM_133509 RAD51B 0 . . . 1.12 80.27 20 4.48 No -4 0.39 No 0 0 No -22 0.64 No 19 25.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69088869 + NM_133509 RAD51B 0 . . . 1.69 78.62 22 4.1 No 63 2.28 Yes 0 0 No -21 0.51 No 34 52.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40995509 + NM_001164269 RAD51 0 . . . 6.29 79.04 19 4.79 No 4 0.16 No 0 0 No -23 0.67 Yes 54 44.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68721462 + NM_133509 RAD51B 0 . . . 4.97 78.67 23 5.91 Yes 37 0.63 No 0 0 No -22 0.94 Yes 43 76.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23630585 - NM_024675 PALB2 0 . . . 7.4 89 23 4.84 No 63 -3.06 No 0 0 No -22 0.54 No 47 74.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68969592 + NM_133509 RAD51B 0 . . . 6.65 82.22 16 5.2 No 36 -2.45 No 0 0 No -20 0.45 No 54 56.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68862869 + NM_133509 RAD51B 0 . . . 0.16 0 17 6.24 Yes 28 1.27 Yes 0 0 No -26 0.28 No 30 84.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108112689 + NM_000051 ATM 0 . . . 2.91 77.29 22 6.16 Yes 40 1.37 Yes 0 0 No -21 0.56 No 48 85.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68748193 + NM_133509 RAD51B 0 . . . 4.17 72.73 28 5.38 No 76 0.52 No 0 0 No -27 0.49 No 52 43.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131929582 + NM_005732 RAD50 0 . . . 0.62 73.28 26 5.2 No 75 -5.96 No 0 0 No -20 0.66 No 44 18.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89685044 + NM_000314 PTEN 0 . . . 5.51 87.9 36 4.91 No 10 0.62 No 0 0 No -29 0.46 No 48 74.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37073626 + NM_000249 MLH1 0 . . . 3.75 88.14 23 7.87 Yes 69 0.17 No 0 0 No -22 0.78 Yes 46 43.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215611176 - NM_000465 BARD1 0 . . . 4.08 0 36 4.99 No 71 1.77 Yes 0 0 No -35 0.83 Yes 53 54.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68350106 + NM_133509 RAD51B 0 . . . 3.54 67.52 28 5.29 No 5 0.66 No 0 0 No -27 0.47 No 48 66.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89642631 + NM_000314 PTEN 0 . . . 5.78 73.18 24 6.62 Yes 10 1.21 Yes 0 0 No -23 0.69 Yes 44 48.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108226503 + NM_000051 ATM 0 . . . 8.6 75.38 22 5.22 No 62 -3 No 0 0 No -29 0.75 Yes 38 66.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190710634 + NM_000534 PMS1 0 . . . 5.24 80.12 23 5.39 No 7 1.16 Yes 0 0 No -22 0.87 Yes 51 82.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89689811 + NM_000314 PTEN 0 . . . 1.41 0 16 5.58 Yes 57 0.33 No 0 0 No -19 0.39 No 37 53.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75505382 - NM_001040108 MLH3 0 . . . 1.82 72.63 22 5.1 No 44 0.5 No 0 0 No -21 0.69 Yes 29 78.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90986021 - NM_002485 NBN 0 . . . 2.56 0 28 4.61 No 65 0.3 No 0 0 No -24 0.43 No 48 81.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59809084 - NM_032043 BRIP1 0 . . . 0.04 61.83 34 4.5 No 63 -5.68 No 0 0 No -26 0.6 No 46 82.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41266979 - NM_007294 BRCA1 0 . . . 1.85 71.85 13 4.9 No 24 0.79 Yes 0 0 No -27 0.58 No 46 65.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68572165 + NM_133509 RAD51B 0 . . . 4.02 70.19 21 5.16 No 19 0.22 No 0 0 No -20 0.4 No 39 58.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89704599 + NM_000314 PTEN 0 . . . 5.88 80.38 11 4.12 No 54 1.62 Yes 0 0 No -27 0.86 Yes 46 92.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41018662 + NM_001164269 RAD51 0 . . . 1.58 71.44 21 4.71 No 35 1.05 Yes 0 0 No -39 0.78 Yes 18 46.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40987924 + NM_001164269 RAD51 0 . . . 3.88 79.35 33 6.91 Yes 49 -4.84 No 0 0 No -28 0.7 Yes 52 65.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47703279 + NM_000251 MSH2 0 . . . 1.82 77.19 14 3.84 No 8 0.21 No 0 0 No -26 0.76 Yes 37 75.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215603469 - NM_000465 BARD1 0 . . . 5.69 72.96 17 5.7 Yes 16 1.11 Yes 0 0 No -24 0.54 No 42 67.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68805490 + NM_133509 RAD51B 0 . . . 3.98 78.17 17 5.19 No 5 1.56 Yes 0 0 No -22 0.57 No 42 62.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59827033 - NM_032043 BRIP1 0 . . . 11.17 87.3 22 5.66 Yes 17 0.73 No 0 0 No -48 0.56 No 41 54.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68306305 + NM_133509 RAD51B 0 . . . 0.96 67.61 24 5.1 No 41 1.61 Yes 0 0 No -40 0.27 No 26 95.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68948934 + NM_133509 RAD51B 0 . . . 5.33 67.65 34 7.71 Yes 76 0.38 No 0 0 No -33 0.75 Yes 25 85.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105196179 + NM_021930 RINT1 0 . . . 3.4 79.88 36 5.15 No 4 1.37 Yes 0 0 No -26 0.61 No 54 77.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68393016 + NM_133509 RAD51B 0 . . . 3.68 87.55 9 3.22 No 43 0.27 No 0 0 No -29 0.68 Yes 52 79.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33433626 - NM_002878 RAD51D 0 . . . 0.8 61.71 34 4.13 No 75 1.16 Yes 0 0 No -21 0.49 No 55 44.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190682478 + NM_000534 PMS1 0 . . . 2.09 70.96 41 7.07 Yes 6 0.22 No 0 0 No -36 0.42 No 49 95.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68982825 + NM_133509 RAD51B 0 . . . 4.9 80.98 44 7.58 Yes 29 0.15 No 0 0 No -24 0.57 No 49 40.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59874390 - NM_032043 BRIP1 0 . . . 4.13 70.85 20 9.37 Yes 1 -1.66 No 0 0 No -41 0.61 No 46 40.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69067494 + NM_133509 RAD51B 0 . . . 4.63 0 22 4.42 No 8 1 Yes 0 0 No -21 0.76 Yes 32 70.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7567421 - NM_000546 TP53 0 . . . 2.1 76.63 18 4.8 No 67 -5.45 No 0 0 No -27 0.54 No 50 44.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108092977 + NM_000051 ATM 0 . . . 7.26 77.52 23 4.98 No 12 1.81 Yes 0 0 No -37 0.38 No 46 89.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69137695 + NM_133509 RAD51B 0 . . . 4.6 74.47 15 5.2 No -4 0.09 No 0 0 No -27 0.39 No 47 52.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75504463 - NM_001040108 MLH3 0 . . . 4.2 81.8 44 5.98 Yes 55 0.66 No 0 0 No -27 0.77 Yes 10 53.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48035045 + NM_000179 MSH6 0 . . . 1.16 0 18 5.76 Yes 16 0.67 No 0 0 No -32 0.45 No 28 82.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47767340 + NM_000251 MSH2 0 . . . 0.81 72.89 12 5.57 Yes -3 0.95 Yes 0 0 No -26 0.69 Yes 61 47.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68962781 + NM_133509 RAD51B 0 . . . 8.33 81.86 30 6.69 Yes 47 1.65 Yes 0 0 No -29 0.65 No 45 76.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105195333 + NM_021930 RINT1 0 . . . 0.69 73.31 20 4.44 No 61 0.63 No 0 0 No -26 0.34 No 36 57.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37077471 + NM_000249 MLH1 0 . . . 2.95 80.22 20 4.36 No 67 -5.44 No 0 0 No -20 0.9 Yes 48 48.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69049920 + NM_133509 RAD51B 0 . . . 1.95 74.11 21 5.8 Yes 52 -2.57 No 0 0 No -20 0.81 Yes 55 24.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68912207 + NM_133509 RAD51B 0 . . . 2.88 70.1 19 5 No 59 0.91 Yes 0 0 No -26 0.55 No 36 89.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68338044 + NM_133509 RAD51B 0 . . . 1.88 53.81 25 4.81 No 72 -3.73 No 0 0 No -21 0.81 Yes 45 29.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94203572 - NM_005591 MRE11 0 . . . 1.05 66.31 28 5.29 No 50 0.75 No 0 0 No -27 0.78 Yes 41 62.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41274568 - NM_007294 BRCA1 0 . . . 2.78 73.89 27 5.74 Yes 42 0.3 No 0 0 No -54 0.67 Yes 51 41.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69021205 + NM_133509 RAD51B 0 . . . 3.45 67.18 27 6.29 Yes 66 0.85 Yes 0 0 No -26 0.91 Yes 37 78.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215596157 - NM_000465 BARD1 0 . . . 2.68 68.66 37 6.08 Yes 45 -4.79 No 0 0 No -36 0.65 No 46 68.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68328679 + NM_133509 RAD51B 0 . . . 1.99 62.81 46 6.09 Yes 5 -1.68 No 0 0 No -35 0.35 No 37 46.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68910135 + NM_133509 RAD51B 0 . . . 1.75 0 29 7.36 Yes 3 0.8 Yes 0 0 No -28 0.55 No 44 54.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90961515 - NM_002485 NBN 0 . . . 0.95 71.73 38 6.59 Yes 43 0.6 No 0 0 No -35 0.43 No 28 78.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68555859 + NM_133509 RAD51B 0 . . . 0.77 71.8 19 6.32 Yes 33 1.61 Yes 0 0 No -25 0.53 No 48 73.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84408066 - NM_139076 FAM175A 0 . . . 4.16 75.11 37 4.5 No 14 0.12 No 0 0 No -33 0.24 No 44 33.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68640871 + NM_133509 RAD51B 0 . . . 5.39 82.02 36 5.23 No 52 1.17 Yes 0 0 No -26 0.71 Yes 48 40.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89707466 + NM_000314 PTEN 0 . . . 2.31 71.02 29 5.86 Yes 61 -3.84 No 0 0 No -28 0.8 Yes 49 65.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47689998 + NM_000251 MSH2 0 . . . 0.82 71.06 21 5.5 No 44 1.47 Yes 0 0 No -20 0.86 Yes 14 48.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68544363 + NM_133509 RAD51B 0 . . . 2.92 75.9 13 4.36 No 5 0.02 No 0 0 No -25 0.8 Yes 48 49.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89627145 + NM_000314 PTEN 0 . . . 4.96 78.15 20 5.66 Yes 67 -2.24 No 0 0 No -20 0.51 No 40 79.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68669401 + NM_133509 RAD51B 0 . . . 2.65 68.72 24 8.59 Yes 16 0.89 Yes 0 0 No -27 0.6 No 42 92.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68413998 + NM_133509 RAD51B 0 . . . 2.46 0 22 5.92 Yes 5 0.27 No 0 0 No -21 0.89 Yes 53 68.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68550528 + NM_133509 RAD51B 0 . . . 1.84 83.92 23 3.78 No 7 0.33 No 0 0 No -23 0.54 No 51 73.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41005289 + NM_001164269 RAD51 0 . . . 0.42 74.73 21 5.11 No 33 1.02 Yes 0 0 No -39 0.4 No 20 58.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32924181 + NM_000059 BRCA2 0 . . . 3.9 82.1 12 4.24 No 12 1.55 Yes 0 0 No -27 0.4 No 46 96.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41233328 - NM_007294 BRCA1 0 . . . 3.4 78.62 22 6.24 Yes 47 -2.73 No 0 0 No -12 0.37 No 44 70.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104170009 - NM_001100119 XRCC3 0 . . . 7.96 82.67 25 5.1 No 16 1.96 Yes 0 0 No -24 0.8 Yes 42 87.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94218211 - NM_005591 MRE11 0 . . . 3.25 80.12 12 5.13 No 75 -2.8 No 0 0 No -25 0.47 No 39 49.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105192597 + NM_021930 RINT1 0 . . . 2.46 77.99 38 6.32 Yes 26 0.31 No 0 0 No -37 0.95 Yes 47 73.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68781797 + NM_133509 RAD51B 0 . . . 2.44 63.25 20 4.98 No 64 1.29 Yes 0 0 No -36 0.37 No 48 68.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68291348 + NM_133509 RAD51B 0 . . . 6.05 80.82 23 5.35 No 60 1.14 Yes 0 0 No -25 0.4 No 37 89.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41194403 - NM_007294 BRCA1 0 . . . 1.18 57.22 28 5.83 Yes 61 -3.46 No 0 0 No -27 0.77 Yes 39 63.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47777126 + NM_000251 MSH2 0 . . . 2.05 65.57 31 5.29 No 62 0.61 No 0 0 No -54 0.53 No 61 26.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68826450 + NM_004360 CDH1 0 . . . 7.38 80.72 34 5.99 Yes 6 0.49 No 0 0 No -21 0.52 No 46 60.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68741797 + NM_133509 RAD51B 0 . . . 5.35 72.96 19 5 No 40 1.51 Yes 0 0 No -21 0.47 No 47 61.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47667366 + NM_000251 MSH2 0 . . . 5.22 74.42 14 5.29 No 47 1.48 Yes 0 0 No -23 0.75 Yes 11 93.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90944705 - NM_002485 NBN 0 . . . 3.9 68.43 20 5.57 Yes 1 0.66 No 0 0 No -19 0.37 No 43 93.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68772034 + NM_133509 RAD51B 0 . . . 6.22 85.25 22 5.44 No 47 0.5 No 0 0 No -29 0.84 Yes 43 78.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69149282 + NM_133509 RAD51B 0 . . . 3.23 63.45 22 4.66 No 18 1.14 Yes 0 0 No -21 0.34 No 50 73.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47700462 + NM_000251 MSH2 0 . . . 3.81 87.15 24 5.48 No 43 0.58 No 0 0 No -23 0.49 No 51 54.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40992537 + NM_001164269 RAD51 0 . . . 4.31 72.35 43 6.61 Yes 21 1.11 Yes 0 0 No -42 0.59 No 37 71.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94214448 - NM_005591 MRE11 0 . . . 4.49 87.77 21 4.79 No 34 1.03 Yes 0 0 No -20 0.75 Yes 24 60.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68982515 + NM_133509 RAD51B 0 . . . 2.3 84.41 13 4.89 No 44 1.69 Yes 0 0 No -42 0.55 No 15 60.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75500662 - NM_001040108 MLH3 0 . . . 1.2 77.34 18 4.9 No 74 1.03 Yes 0 0 No -32 0.63 No 47 63.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75515496 - NM_001040108 MLH3 0 . . . 1.5 70.7 18 3.67 No 46 1.32 Yes 0 0 No -21 0.39 No 44 23.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68640851 + NM_133509 RAD51B 0 . . . 1.28 70.12 48 6.57 Yes 62 1.25 Yes 0 0 No -34 0.64 No 32 81.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59890073 - NM_032043 BRIP1 0 . . . 2.41 67.64 26 5.48 No -2 0.87 Yes 0 0 No -25 0.86 Yes 43 67.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47653767 + NM_000251 MSH2 0 . . . 4.34 77.07 24 7.06 Yes 49 0.32 No 0 0 No -23 0.85 Yes 49 68.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190699474 + NM_000534 PMS1 0 . . . 7.65 85.39 28 5.25 No 18 1.46 Yes 0 0 No -27 0.77 Yes 40 85.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108205124 + NM_000051 ATM 0 . . . 1.41 64.68 9 4.68 No 71 -6.74 No 0 0 No -21 0.49 No 42 47.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59823372 - NM_032043 BRIP1 0 . . . 4.17 68.59 18 4.46 No 71 0.39 No 0 0 No -24 0.46 No 45 94.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59791905 - NM_032043 BRIP1 0 . . . 4.16 64.44 23 6.03 Yes 76 -5.68 No 0 0 No -21 0.36 No 58 34.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131964011 + NM_005732 RAD50 0 . . . 1.13 74.59 54 4.97 No 71 -3.63 No 0 0 No -28 0.57 No 44 42.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48028881 + NM_000179 MSH6 0 . . . 1.3 0 17 5.48 No 43 0.28 No 0 0 No -16 0.63 No 41 67.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21983042 - NM_000077 CDKN2A 0 . . . 2.37 76.8 18 4.8 No 62 -4.96 No 0 0 No -21 0.6 No 34 30.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68962809 + NM_133509 RAD51B 0 . . . 0.46 71.11 33 6.2 Yes 75 1.63 Yes 0 0 No -32 0.63 No 47 51.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190739506 + NM_000534 PMS1 0 . . . 1.01 66.95 16 3.86 No 34 1.27 Yes 0 0 No -36 0.79 Yes 45 61.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68895391 + NM_133509 RAD51B 0 . . . 5.16 81.77 23 5.7 Yes 72 0.8 Yes 0 0 No -28 0.66 No 49 75.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68936277 + NM_133509 RAD51B 0 . . . 2.08 78.92 42 6.93 Yes 30 0.52 No 0 0 No -41 0.89 Yes 44 26.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33436669 - NM_002878 RAD51D 0 . . . 3.85 76.15 19 5.41 No 35 0.38 No 0 0 No -22 0.47 No 52 64.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68625193 + NM_133509 RAD51B 0 . . . 12.98 84.95 18 4.69 No 22 0.84 Yes 0 0 No -27 0.63 No 36 66.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108142613 + NM_000051 ATM 0 . . . 4.1 82.29 20 4.48 No 26 0.92 Yes 0 0 No -26 0.9 Yes 37 43.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69109110 + NM_133509 RAD51B 0 . . . 2.8 68.91 25 4.43 No 27 0.45 No 0 0 No -17 0.65 No 41 90 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41256200 - NM_007294 BRCA1 0 . . . 2.06 72.82 23 5.17 No 14 0.2 No 0 0 No -23 0.69 Yes 44 66.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90952844 - NM_002485 NBN 0 . . . 7.08 83.22 23 5.38 No 67 -1.35 No 0 0 No -22 0.75 Yes 40 64.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68859557 + NM_133509 RAD51B 0 . . . 2.07 72.39 32 5.74 Yes 19 1.59 Yes 0 0 No -31 0.42 No 39 85.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131903391 + NM_005732 RAD50 0 . . . 6.3 81.06 18 4.89 No 59 -5 No 0 0 No -52 0.67 Yes 53 52.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68979315 + NM_133509 RAD51B 0 . . . 8.37 75.91 14 4.25 No 20 1.37 Yes 0 0 No -21 0.85 Yes 38 72.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68733890 + NM_133509 RAD51B 0 . . . 2.44 76.3 16 4.68 No 58 1.06 Yes 0 0 No -20 0.61 No 46 39.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68616491 + NM_133509 RAD51B 0 . . . 6.54 86.11 22 5.74 Yes 17 -1.53 No 0 0 No -21 0.84 Yes 45 70.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108144368 + NM_000051 ATM 0 . . . 3.07 75.52 20 5.17 No 59 1.6 Yes 0 0 No -31 0.85 Yes 46 68.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59926911 - NM_032043 BRIP1 0 . . . 5.65 92.39 18 4.89 No 35 0.21 No 0 0 No -17 0.38 No 44 77.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68503149 + NM_133509 RAD51B 0 . . . 1.56 76.04 37 6.02 Yes 34 -1.99 No 0 0 No -36 0.57 No 53 37.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94177628 - NM_005591 MRE11 0 . . . 6.02 69.69 10 3.84 No 13 1.31 Yes 0 0 No -27 0.47 No 45 96.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68358164 + NM_133509 RAD51B 0 . . . 5.74 82.38 18 4.9 No 42 1.21 Yes 0 0 No -17 0.86 Yes 51 52.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68715984 + NM_133509 RAD51B 0 . . . 4.07 74.63 25 5.78 Yes 31 0.1 No 0 0 No -24 0.91 Yes 40 57.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69032761 + NM_133509 RAD51B 0 . . . 2.64 71.64 24 5.8 Yes 15 0.78 Yes 0 0 No -28 0.64 No 44 59.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68536447 + NM_133509 RAD51B 0 . . . 4.72 64.76 33 5.83 Yes 42 1.42 Yes 0 0 No -28 0.57 No 43 84.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68567596 + NM_133509 RAD51B 0 . . . 0.65 58.13 23 5.39 No 1 0.93 Yes 0 0 No -25 0.45 No 57 30.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90992199 - NM_002485 NBN 0 . . . 5.24 77.17 19 5.74 Yes 71 -3.9 No 0 0 No -18 0.79 Yes 36 48.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190663680 + NM_000534 PMS1 0 . . . 0.33 0 17 5.29 No -4 -2.17 No 0 0 No -16 0.44 No 43 74.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68376336 + NM_133509 RAD51B 0 . . . 0.53 59.47 10 4.21 No 70 -6.06 No 0 0 No -22 0.55 No 45 79.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32963641 + NM_000059 BRCA2 0 . . . 7.27 88.22 35 6.75 Yes 69 0.94 Yes 0 0 No -34 0.63 No 52 46.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94156184 - NM_005591 MRE11 0 . . . 2.77 68.18 21 4.15 No 8 0.67 No 0 0 No -25 0.79 Yes 50 64.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108194051 + NM_000051 ATM 0 . . . 2.82 64.85 38 5.87 Yes -4 0.38 No 0 0 No -28 0.47 No 45 70.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89630573 + NM_000314 PTEN 0 . . . 4.13 77.01 27 5.48 No 12 0.65 No 0 0 No -26 0.87 Yes 39 54.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68585657 + NM_133509 RAD51B 0 . . . 4.32 81.19 35 5.91 Yes 15 -2.33 No 0 0 No -34 0.46 No 51 42.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108153273 + NM_000051 ATM 0 . . . 2.43 0 14 4.47 No 29 0.57 No 0 0 No -23 0.41 No 35 72.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47728026 + NM_000251 MSH2 0 . . . 0.59 66.46 27 5.73 Yes 16 0.95 Yes 0 0 No -27 0.66 No 42 87.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41244294 - NM_007294 BRCA1 0 . . . 0.81 64.9 14 5.96 Yes 68 -5.78 No 0 0 No -37 0.22 No 50 26.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047195 + NM_000249 MLH1 0 . . . 2.25 72.39 22 7.02 Yes 42 0.78 Yes 0 0 No -29 0.43 No 47 51.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68294862 + NM_133509 RAD51B 0 . . . 2.4 72.06 27 5.2 No 44 0.41 No 0 0 No -26 0.78 Yes 49 45.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48019926 + NM_000179 MSH6 0 . . . 8.55 72.59 23 5.91 Yes 5 0.76 No 0 0 No -22 0.83 Yes 48 90.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23627741 - NM_024675 PALB2 0 . . . 7.62 75.38 28 3.79 No 59 -3.53 No 0 0 No -27 0.41 No 46 70.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68865709 + NM_133509 RAD51B 0 . . . 2.85 88.15 11 5.1 No -3 0.53 No 0 0 No -23 0.52 No 51 58.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48016091 + NM_000179 MSH6 0 . . . 1.52 83.13 33 8.48 Yes NA NA NA 0 0 No -32 0.85 Yes 39 14.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32898014 + NM_000059 BRCA2 0 . . . 5.54 80.85 28 5.45 No 58 -4.33 No 0 0 No -27 0.84 Yes 47 62.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94194720 - NM_005591 MRE11 0 . . . 6.38 80.98 22 4.9 No 18 0.18 No 0 0 No -21 0.48 No 40 70.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41232085 - NM_007294 BRCA1 0 . . . 5.77 76.21 21 3.83 No 17 0.21 No 0 0 No -29 0.77 Yes 41 39.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190681321 + NM_000534 PMS1 0 . . . 5.14 77.64 11 5.1 No 62 0.84 Yes 0 0 No -27 0.74 Yes 41 56.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59882577 - NM_032043 BRIP1 0 . . . 9.78 86.38 42 6.93 Yes 2 1.88 Yes 0 0 No -41 0.43 No 33 60 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94216099 - NM_005591 MRE11 0 . . . 3.44 83.86 11 4.77 No 29 0.81 Yes 0 0 No -26 0.5 No 47 50.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190725080 + NM_000534 PMS1 0 . . . 7.22 79.07 31 6.08 Yes 18 0.81 Yes 0 0 No -30 0.83 Yes 44 66.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68867639 + NM_133509 RAD51B 0 . . . 5.59 79.61 26 5.05 No 24 0.26 No 0 0 No -25 0.53 No 41 78.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68318302 + NM_133509 RAD51B 0 . . . 5.32 87.57 15 4.84 No 53 -0.64 No 0 0 No -23 0.4 No 50 83.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94222825 - NM_005591 MRE11 0 . . . 6 0 34 5.73 Yes 24 1.21 Yes 0 0 No -22 0.82 Yes 55 52.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105193248 + NM_021930 RINT1 0 . . . 2.94 68.06 19 4.8 No 42 1.07 Yes 0 0 No -19 0.71 Yes 42 61.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215641326 - NM_000465 BARD1 0 . . . 4.22 80.56 35 4.71 No 30 1.31 Yes 0 0 No -29 0.82 Yes 49 71.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68851451 + NM_133509 RAD51B 0 . . . 6.12 80.93 52 6.18 Yes 56 0.28 No 0 0 No -20 0.32 No 36 50.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68885698 + NM_133509 RAD51B 0 . . . 0.42 85.03 33 5.83 Yes 31 0.37 No 0 0 No -27 0.58 No 47 60.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68570662 + NM_133509 RAD51B 0 . . . 0.79 0 15 5.14 No 38 0.18 No 0 0 No -20 0.89 Yes 48 48.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68851678 + NM_004360 CDH1 0 . . . 0.21 65.03 22 5.29 No 60 -5.12 No 0 0 No -21 0.75 Yes 52 48.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21970395 - NM_000077 CDKN2A 0 . . . 4.86 79.5 16 4.44 No -1 2.05 Yes 0 0 No -32 0.33 No 49 58.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68344958 + NM_133509 RAD51B 0 . . . 6.36 73.65 22 5.26 No 2 0.53 No 0 0 No -25 0.57 No 41 47.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68286977 + NM_133509 RAD51B 0 . . . 0.01 57.29 28 5.83 Yes 43 -2.33 No 0 0 No -24 0.7 Yes 45 40.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68587177 + NM_133509 RAD51B 0 . . . 0.38 70.17 12 4.11 No 74 0.62 No 0 0 No -29 0.45 No 53 72.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68300962 + NM_133509 RAD51B 0 . . . 10.53 74.96 36 5.85 Yes 32 1.16 Yes 0 0 No -28 0.93 Yes 21 40.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41271691 - NM_007294 BRCA1 0 . . . 2.74 88 20 4.99 No 13 0.95 Yes 0 0 No -27 0.41 No 49 75.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47789728 + NM_000251 MSH2 0 . . . 0.03 0 13 4.36 No 62 0.05 No 0 0 No -32 0.41 No 51 45.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47656535 + NM_000251 MSH2 0 . . . 2.43 69.75 28 5.74 Yes 69 0.53 No 0 0 No -27 0.44 No 49 57.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37052052 + NM_000249 MLH1 0 . . . 0.2 84.41 21 6.4 Yes 54 0.26 No 0 0 No -20 0.6 No 47 66.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94228821 - NM_005591 MRE11 0 . . . 1.03 63.91 33 5.69 Yes 35 1.49 Yes 0 0 No -25 0.71 Yes 38 71.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89675754 + NM_000314 PTEN 0 . . . 1.3 74.76 15 5.63 Yes 44 0.45 No 0 0 No -22 0.59 No 48 44.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215613937 - NM_000465 BARD1 0 . . . 0.1 0 39 5.32 No 62 1.72 Yes 0 0 No -34 0.41 No 40 61.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68766743 + NM_133509 RAD51B 0 . . . 6.18 90.79 34 5.04 No 67 0.79 Yes 0 0 No -19 0.58 No 51 65.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131973626 + NM_005732 RAD50 0 . . . 2.36 80.83 34 5.92 Yes -1 0.36 No 0 0 No -33 0.87 Yes 50 68.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47728361 + NM_000251 MSH2 0 . . . 1.66 0 43 4.69 No 45 1.69 Yes 0 0 No -20 0.32 No 13 82.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89684175 + NM_000314 PTEN 0 . . . 9.45 88.47 18 6 Yes 39 0.66 No 0 0 No -17 0.84 Yes 45 65.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59877098 - NM_032043 BRIP1 0 . . . 9.68 87.93 37 5.82 Yes 16 0.35 No 0 0 No -32 0.52 No 42 84.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32904730 + NM_000059 BRCA2 0 . . . 0.03 71.66 15 5.2 No 71 -5.4 No 0 0 No -28 0.73 Yes 49 86.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68853944 + NM_004360 CDH1 0 . . . 2.74 64.27 17 6.56 Yes 17 0.55 No 0 0 No -16 0.81 Yes 41 76.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90980889 - NM_002485 NBN 0 . . . 4.26 73.73 45 6.28 Yes 60 0.6 No 0 0 No -26 0.93 Yes 46 63.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190726199 + NM_000534 PMS1 0 . . . 2.03 80.13 36 8.85 Yes 10 0.53 No 0 0 No -35 0.6 No 48 48.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68907809 + NM_133509 RAD51B 0 . . . 0.73 71.99 28 5.57 Yes 50 -5.11 No 0 0 No -27 0.87 Yes 48 75.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68635287 + NM_133509 RAD51B 0 . . . 0.39 61.65 16 5.1 No 66 -5.07 No 0 0 No -22 0.71 Yes 45 88.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69106957 + NM_133509 RAD51B 0 . . . 2.35 86.61 9 3.87 No 43 0.53 No 0 0 No -35 0.71 Yes 15 59.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079029 + NM_000249 MLH1 0 . . . 0.31 67.77 28 6.74 Yes 68 0.65 No 0 0 No -27 0.95 Yes 49 60.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47651446 + NM_000251 MSH2 0 . . . 4.38 79.43 30 5.66 Yes 9 1.04 Yes 0 0 No -25 0.63 No 49 87.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47762780 + NM_000251 MSH2 0 . . . 4.56 74.37 19 4.8 No 52 0.29 No 0 0 No -18 0.73 Yes 53 57.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56795476 + NM_058216 RAD51C 0 . . . 2.97 85.37 32 5.75 Yes 33 1.14 Yes 0 0 No -31 0.47 No 51 85.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108211420 + NM_000051 ATM 0 . . . 1.88 62.48 38 6.16 Yes 9 0.86 Yes 0 0 No -31 0.33 No 49 52.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47700706 + NM_000251 MSH2 0 . . . 3.76 72.38 20 5.66 Yes 21 1.14 Yes 0 0 No -22 0.58 No 37 82.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59765349 - NM_032043 BRIP1 0 . . . 2.84 76.51 34 6.53 Yes 31 -3.05 No 0 0 No -33 0.42 No 34 75.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94197576 - NM_005591 MRE11 0 . . . 1.78 70.08 16 5.22 No 76 0.6 No 0 0 No -29 0.38 No 44 89.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47694408 + NM_000251 MSH2 0 . . . 4.42 84.22 16 4.58 No 8 1.13 Yes 0 0 No -19 0.56 No 50 88.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69046180 + NM_133509 RAD51B 0 . . . 4.43 82.73 30 5.48 No 39 1.16 Yes 0 0 No -29 0.48 No 48 53.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29094284 - NM_001005735 CHEK2 0 . . . 1.41 84.22 24 5.11 No 74 1.41 Yes 0 0 No -23 0.74 Yes 50 60.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56779141 + NM_058216 RAD51C 0 . . . 2.78 74.73 31 4.98 No 32 1.35 Yes 0 0 No -24 0.65 No 40 61.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89691041 + NM_000314 PTEN 0 . . . 0.45 80.3 62 6.54 Yes 43 0.38 No 0 0 No -32 0.48 No 48 94.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21976233 - NM_000077 CDKN2A 0 . . . 1.43 64.78 19 5 No 52 0.04 No 0 0 No -18 0.56 No 46 47.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190718140 + NM_000534 PMS1 0 . . . 1.95 70.76 18 5.78 Yes 73 -5.58 No 0 0 No -24 0.43 No 48 68.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190709819 + NM_000534 PMS1 0 . . . 6.97 88.16 29 6.99 Yes 58 1.03 Yes 0 0 No -28 0.93 Yes 19 34.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41260484 - NM_007294 BRCA1 0 . . . 1.04 81.44 33 4.75 No 3 0.73 No 0 0 No -32 0.61 No 50 79.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90952660 - NM_002485 NBN 0 . . . 2.12 71.96 28 6.96 Yes 10 1.77 Yes 0 0 No -27 0.9 Yes 32 42.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108120764 + NM_000051 ATM 0 . . . 2.33 65.77 26 6.93 Yes 71 0.65 No 0 0 No -25 0.96 Yes 44 39.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23627359 - NM_024675 PALB2 0 . . . 2 0 12 3.64 No 49 -2.88 No 0 0 No -25 0.46 No 43 64.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56785087 + NM_058216 RAD51C 0 . . . 4.85 82.47 27 6.15 Yes 38 1.51 Yes 0 0 No -26 0.8 Yes 48 49.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152368187 - NM_005431 XRCC2 0 . . . 0.52 0 19 4.86 No 45 1.02 Yes 0 0 No -37 0.47 No 18 27.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56797400 + NM_058216 RAD51C 0 . . . 3.93 70.85 31 5.66 Yes 21 1.72 Yes 0 0 No -30 0.75 Yes 37 74.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32946242 + NM_000059 BRCA2 0 . . . 4.79 77.09 25 5.56 Yes 11 1.08 Yes 0 0 No -21 0.34 No 43 69.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68971759 + NM_133509 RAD51B 0 . . . 1.16 69.58 15 4.22 No 70 -5.19 No 0 0 No -55 0.38 No 50 37.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642727 - NM_000465 BARD1 0 . . . 0.27 74.73 23 5.7 Yes 44 0.17 No 0 0 No -22 0.81 Yes 14 67.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47658490 + NM_000251 MSH2 0 . . . 1.9 76.25 14 5.16 No 75 1.01 Yes 0 0 No -19 0.55 No 42 71.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90970022 - NM_002485 NBN 0 . . . 0.08 65.4 47 7.81 Yes 38 -2.21 No 0 0 No -31 0.58 No 45 38.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68816048 + NM_133509 RAD51B 0 . . . 12.86 97.39 38 4.76 No 62 0.3 No 0 0 No -31 0.47 No 49 41.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68811887 + NM_133509 RAD51B 0 . . . 1.54 81.3 21 5.2 No 56 1.03 Yes 0 0 No -20 0.58 No 43 86.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68755258 + NM_133509 RAD51B 0 . . . 0.01 0 45 7.68 Yes 30 0.5 No 0 0 No -32 0.39 No 51 48.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94178369 - NM_005591 MRE11 0 . . . 0.7 68.94 25 5.03 No 76 0.3 No 0 0 No -25 0.63 No 45 79.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108139433 + NM_000051 ATM 0 . . . 5.44 76.55 12 4.72 No 50 -4.1 No 0 0 No -20 0.32 No 40 50.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75504649 - NM_001040108 MLH3 0 . . . 2.24 82.42 52 7.42 Yes 67 -4.96 No 0 0 No -39 0.42 No 43 79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48034486 + NM_000179 MSH6 0 . . . 6.41 92.15 22 7.28 Yes 15 0.15 No 0 0 No -21 0.9 Yes 49 64.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41206588 - NM_007294 BRCA1 0 . . . 4.36 87.8 21 5.2 No 54 0.36 No 0 0 No -20 0.41 No 52 64.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108181912 + NM_000051 ATM 0 . . . 3.25 82.27 21 5.1 No 41 0.84 Yes 0 0 No -20 0.57 No 17 85.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69127988 + NM_133509 RAD51B 0 . . . 3.45 69.2 131 8.41 Yes 73 0.62 No 0 0 No -26 0.43 No 38 73.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89635890 + NM_000314 PTEN 0 . . . 2.32 72.87 32 6.12 Yes 62 0.55 No 0 0 No -31 0.78 Yes 46 90.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215659473 - NM_000465 BARD1 0 . . . 3.1 64.8 22 5 No 49 -4.9 No 0 0 No -21 0.67 Yes 39 77.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69106624 + NM_133509 RAD51B 0 . . . 2.6 72.25 70 9.07 Yes 32 1.56 Yes 0 0 No -37 0.76 Yes 26 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56780195 + NM_058216 RAD51C 0 . . . 4.06 77.69 18 4.9 No 40 -2.84 No 0 0 No -22 0.3 No 47 54.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68849286 + NM_133509 RAD51B 0 . . . 0.53 0 25 4.93 No 18 0.02 No 0 0 No -24 0.36 No 45 43.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131948024 + NM_005732 RAD50 0 . . . 0.52 87.33 15 5.33 No -2 0.2 No 0 0 No -27 0.68 Yes 49 80.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47633721 + NM_000251 MSH2 0 . . . 0.11 70.57 10 4.9 No 39 -4.65 No 0 0 No -60 0.48 No 51 43.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59861332 - NM_032043 BRIP1 0 . . . 5.5 76.05 33 6.32 Yes 43 0.95 Yes 0 0 No -32 0.47 No 40 83.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89671840 + NM_000314 PTEN 0 . . . 0.16 68.84 10 4 No 34 -2.13 No 0 0 No -33 0.77 Yes 48 75.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105193985 + NM_021930 RINT1 0 . . . 2.31 71.02 25 5.29 No 70 -4.08 No 0 0 No -24 0.56 No 51 25.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68467809 + NM_133509 RAD51B 0 . . . 4.52 71.62 15 4.24 No 3 0.44 No 0 0 No -55 0.67 Yes 51 55.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68467745 + NM_133509 RAD51B 0 . . . 3.37 72.91 21 5.76 Yes 47 0.66 No 0 0 No -31 0.55 No 45 49.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89659528 + NM_000314 PTEN 0 . . . 6.31 81.13 42 6.89 Yes 68 0.9 Yes 0 0 No -41 0.69 Yes 42 67.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59810777 - NM_032043 BRIP1 0 . . . 1.04 69.17 23 4.69 No 26 -3.36 No 0 0 No -22 0.82 Yes 41 47.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68721216 + NM_133509 RAD51B 0 . . . 6.23 78.03 41 5.4 No 72 0.68 No 0 0 No -30 0.52 No 43 79.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68614100 + NM_133509 RAD51B 0 . . . 1.61 74.22 28 5.44 No 59 0.92 Yes 0 0 No -27 0.69 Yes 47 42.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104173838 - NM_001100119 XRCC3 0 . . . 1.17 63.71 14 4.62 No 15 -2.74 No 0 0 No -29 0.47 No 47 46.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68853569 + NM_004360 CDH1 0 . . . 1.05 71.15 20 4.95 No 75 0.59 No 0 0 No -23 0.6 No 49 58.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32944914 + NM_000059 BRCA2 0 . . . 3.28 80.12 19 5.48 No 6 1.13 Yes 0 0 No -18 0.57 No 52 66.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37072565 + NM_000249 MLH1 0 . . . 3.13 0 30 5.1 No 15 0.08 No 0 0 No -19 0.81 Yes 43 54.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68916167 + NM_133509 RAD51B 0 . . . 7.16 71.22 28 5.38 No 10 1.76 Yes 0 0 No -27 0.59 No 48 86.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56786890 + NM_058216 RAD51C 0 . . . 3.38 75.39 21 5.18 No 57 -3.55 No 0 0 No -22 0.61 No 52 31.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108106342 + NM_000051 ATM 0 . . . 0.16 68.83 22 5.29 No 71 0.63 No 0 0 No -24 0.43 No 51 54.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37084463 + NM_000249 MLH1 0 . . . 3 77.22 22 7.53 Yes 76 -4.08 No 0 0 No -21 0.46 No 45 83.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41260254 - NM_007294 BRCA1 0 . . . 3.42 83.85 17 4 No 27 1.79 Yes 0 0 No -28 0.94 Yes 42 97.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68290836 + NM_133509 RAD51B 0 . . . 2.75 0 27 5.64 Yes 69 -2.05 No 0 0 No -26 0.64 No 23 63.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29135888 - NM_001005735 CHEK2 0 . . . 1.35 78.03 19 6.06 Yes 70 0.94 Yes 0 0 No -33 0.58 No 52 77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89626209 + NM_000314 PTEN 0 . . . 2.73 69.06 21 5 No 49 0.79 Yes 0 0 No -20 0.73 Yes 35 61.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1212389 + NM_000455 STK11 0 . . . 1.34 0 25 4.82 No 9 1.51 Yes 0 0 No -30 0.36 No 44 88.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108197908 + NM_000051 ATM 0 . . . 3.73 82.01 32 5.89 Yes 13 0.62 No 0 0 No -32 0.86 Yes 45 89.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40985663 + NM_001164269 RAD51 0 . . . 3.44 78.51 23 5.39 No 33 1.04 Yes 0 0 No -22 0.95 Yes 42 55.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68789175 + NM_133509 RAD51B 0 . . . 6.17 80.65 19 5.57 Yes -4 0.64 No 0 0 No -18 0.53 No 32 88.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29082460 - NM_001005735 CHEK2 0 . . . 2.27 69.25 17 5.29 No 75 1.25 Yes 0 0 No -26 0.33 No 60 22.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131910430 + NM_005732 RAD50 0 . . . 4.98 75.76 34 5.75 Yes 5 0.36 No 0 0 No -36 0.37 No 45 91.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105185703 + NM_021930 RINT1 0 . . . 4.22 72.73 59 7.44 Yes 57 -3.29 No 0 0 No -31 0.33 No 49 80.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68864908 + NM_133509 RAD51B 0 . . . 9.07 85.73 28 5.37 No 34 -0.59 No 0 0 No -27 0.68 Yes 52 39.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190715314 + NM_000534 PMS1 0 . . . 0.27 56.43 30 7.64 Yes 71 -5.2 No 0 0 No -29 0.85 Yes 52 48.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68314917 + NM_133509 RAD51B 0 . . . 4.75 85.02 37 4.39 No 4 1.07 Yes 0 0 No -36 0.75 Yes 44 41.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47769239 + NM_000251 MSH2 0 . . . 3.41 89.6 32 5.74 Yes 13 1.45 Yes 0 0 No -20 0.53 No 45 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41269458 - NM_007294 BRCA1 0 . . . 0.83 83.28 26 5.48 No 75 1.69 Yes 0 0 No -25 0.76 Yes 48 66.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68523346 + NM_133509 RAD51B 0 . . . 5.57 71.75 25 5.6 Yes 2 1.16 Yes 0 0 No -24 0.84 Yes 43 62.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68824384 + NM_004360 CDH1 0 . . . 1.35 0 32 5.27 No 57 1.09 Yes 0 0 No -31 0.54 No 47 75.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68992357 + NM_133509 RAD51B 0 . . . 3.23 76.6 20 4.57 No 4 1.13 Yes 0 0 No -18 0.47 No 47 94.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94164188 - NM_005591 MRE11 0 . . . 0.97 0 23 5.38 No 41 0.06 No 0 0 No -22 0.73 Yes 61 50.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41020268 + NM_001164269 RAD51 0 . . . 2.58 75.2 20 5.57 Yes 33 1.16 Yes 0 0 No -19 0.58 No 25 58.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52436252 - NM_004656 BAP1 0 . . . 6.84 79.23 26 4.58 No 25 1.65 Yes 0 0 No -23 0.67 Yes 40 69.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89709210 + NM_000314 PTEN 0 . . . 3.18 80.06 14 6.56 Yes 66 0.06 No 0 0 No -41 0.64 No 33 85.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47792649 + NM_000251 MSH2 0 . . . 6.59 81.62 17 6.48 Yes 21 0.55 No 0 0 No -19 0.64 No 37 67.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37085632 + NM_000249 MLH1 0 . . . 6.69 83.84 31 5.91 Yes 15 0.59 No 0 0 No -30 0.59 No 43 89.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68872921 + NM_133509 RAD51B 0 . . . 3.05 80.3 21 6.22 Yes 29 0.78 Yes 0 0 No -20 0.72 Yes 35 48.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108168540 + NM_000051 ATM 0 . . . 4.36 70.17 14 5.01 No 25 0.27 No 0 0 No -19 0.19 No 39 75.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190736141 + NM_000534 PMS1 0 . . . 5.23 76.51 38 6.55 Yes 19 0.08 No 0 0 No -37 0.54 No 39 62.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68628606 + NM_133509 RAD51B 0 . . . 3.42 85.26 20 4.32 No 44 0.72 No 0 0 No -19 0.49 No 46 82.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29111036 - NM_001005735 CHEK2 0 . . . 6.77 85.44 28 5.38 No 12 0.67 No 0 0 No -27 0.83 Yes 46 88.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68776354 + NM_133509 RAD51B 0 . . . 7.97 81.16 25 5.14 No 1 0.93 Yes 0 0 No -27 0.59 No 46 42.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108209262 + NM_000051 ATM 0 . . . 2.98 67.29 20 5.1 No 24 -3.24 No 0 0 No -21 0.71 Yes 42 54.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75501599 - NM_001040108 MLH3 0 . . . 2.16 80.12 20 5.57 Yes 7 1.39 Yes 0 0 No -19 0.53 No 51 88.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68940987 + NM_133509 RAD51B 0 . . . 4.03 75.74 37 5.79 Yes 73 -2.37 No 0 0 No -30 0.64 No 41 58.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59772001 - NM_032043 BRIP1 0 . . . 3.93 75.05 25 5.38 No 50 -5.57 No 0 0 No -22 0.82 Yes 40 40.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68775362 + NM_133509 RAD51B 0 . . . 3.79 0 37 6 Yes 10 0.36 No 0 0 No -21 0.88 Yes 48 65.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47730289 + NM_000251 MSH2 0 . . . 0.52 69.57 43 5.72 Yes 1 0.33 No 0 0 No -42 0.58 No 45 70.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40995313 + NM_001164269 RAD51 0 . . . 3.65 75.55 23 5.39 No 19 0.7 No 0 0 No -22 0.82 Yes 39 72.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47770677 + NM_000251 MSH2 0 . . . 4.25 72.57 29 5.12 No 11 2.15 Yes 0 0 No -33 0.66 No 47 85.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75519070 - NM_001040108 MLH3 0 . . . 5.02 88.99 30 5.39 No 16 0.18 No 0 0 No -29 0.86 Yes 42 64.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48008190 + NM_000179 MSH6 0 . . . 0.21 0 32 5.66 Yes 58 -1.59 No 0 0 No -25 0.54 No 38 57.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41259219 - NM_007294 BRCA1 0 . . . 2.84 66.46 19 4.86 No 55 0.99 Yes 0 0 No -22 0.93 Yes 42 47.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215650206 - NM_000465 BARD1 0 . . . 3.14 71.38 16 5.47 No 47 1.62 Yes 0 0 No -23 0.31 No 49 43.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56802747 + NM_058216 RAD51C 0 . . . 5.94 86.43 10 5.48 No 0 0.62 No 0 0 No -23 0.75 Yes 46 69.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68448495 + NM_133509 RAD51B 0 . . . 0.33 72.4 45 4.08 No 41 0.25 No 0 0 No -35 0.43 No 39 19.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56802358 + NM_058216 RAD51C 0 . . . 0.94 0 13 3.35 No -2 1.09 Yes 0 0 No -32 0.58 No 14 80.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23639204 - NM_024675 PALB2 0 . . . 6.29 76.67 13 4.96 No 39 1.13 Yes 0 0 No -18 0.41 No 48 48.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105170707 + NM_021930 RINT1 0 . . . 2.67 72.14 23 6.24 Yes 71 -6.28 No 0 0 No -22 0.46 No 49 40.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6044882 - NM_000535 PMS2 0 . . . 1.72 71.32 29 7.32 Yes 58 -3.68 No 0 0 No -28 0.91 Yes 42 34.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41217684 - NM_007294 BRCA1 0 . . . 5.91 88.21 29 5.48 No 60 1.17 Yes 0 0 No -28 0.37 No 41 51.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68787566 + NM_004360 CDH1 0 . . . 2.95 73.04 29 5.7 Yes 76 0.92 Yes 0 0 No -28 0.85 Yes 49 85.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68842241 + NM_133509 RAD51B 0 . . . 4.89 72.53 19 6.3 Yes 55 1.14 Yes 0 0 No -25 0.56 No 42 64.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47764654 + NM_000251 MSH2 0 . . . 4.83 79.69 39 6.28 Yes 7 1.02 Yes 0 0 No -23 0.83 Yes 51 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215617019 - NM_000465 BARD1 0 . . . 0.22 67.8 26 5.2 No 56 0.77 Yes 0 0 No -25 0.81 Yes 45 55.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56779255 + NM_058216 RAD51C 0 . . . 1.25 63.43 25 5.61 Yes 76 0.87 Yes 0 0 No -24 0.6 No 40 81.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41207635 - NM_007294 BRCA1 0 . . . 6.87 80.12 30 6.32 Yes 70 0.66 No 0 0 No -29 0.55 No 45 59.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68399751 + NM_133509 RAD51B 0 . . . 1.41 80.96 24 7.26 Yes -1 0.72 No 0 0 No -23 0.44 No 49 76.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131939413 + NM_005732 RAD50 0 . . . 8.35 84.16 18 4.03 No 46 0.42 No 0 0 No -20 0.5 No 41 86.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68808504 + NM_004360 CDH1 0 . . . 2.91 71.89 34 7.32 Yes 45 0.28 No 0 0 No -33 0.68 Yes 41 83.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69015130 + NM_133509 RAD51B 0 . . . 5.44 79.56 17 6.56 Yes 27 0.76 No 0 0 No -16 0.79 Yes 31 69.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105188519 + NM_021930 RINT1 0 . . . 4.34 87.6 30 4.59 No 2 1.28 Yes 0 0 No -29 0.48 No 43 57.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68951952 + NM_133509 RAD51B 0 . . . 6.9 69.89 19 5.08 No 42 1.23 Yes 0 0 No -29 0.43 No 39 96.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152366292 - NM_005431 XRCC2 0 . . . 2.16 84.19 34 4.59 No 8 1.06 Yes 0 0 No -24 0.49 No 43 81.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47663309 + NM_000251 MSH2 0 . . . 3.6 85.02 19 5.97 Yes 4 1.2 Yes 0 0 No -22 0.73 Yes 54 73.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215604466 - NM_000465 BARD1 0 . . . 1.81 70.34 17 4.87 No 30 0.91 Yes 0 0 No -21 0.38 No 56 43.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215612907 - NM_000465 BARD1 0 . . . 1.9 65.28 27 5.2 No 38 0.03 No 0 0 No -26 0.56 No 39 61.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47662777 + NM_000251 MSH2 0 . . . 1.82 83.64 27 7.4 Yes 33 0.98 Yes 0 0 No -26 0.9 Yes 25 46.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6046793 - NM_000535 PMS2 0 . . . 6.08 76.93 28 5.39 No 5 1.12 Yes 0 0 No -24 0.59 No 48 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131970850 + NM_005732 RAD50 0 . . . 1.61 71.73 135 8.67 Yes 38 1.27 Yes 0 0 No -25 0.81 Yes 50 75.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131972351 + NM_005732 RAD50 0 . . . 0.14 0 13 5 No 74 -3.72 No 0 0 No -25 0.39 No 36 87.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59796302 - NM_032043 BRIP1 0 . . . 2.78 67.91 41 5.96 Yes 54 0.73 No 0 0 No -34 0.66 No 48 62.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23614394 - NM_024675 PALB2 0 . . . 0.8 71.92 37 6.16 Yes 40 -4.21 No 0 0 No -34 0.7 Yes 46 31.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108108224 + NM_000051 ATM 0 . . . 8.25 82.5 29 5.55 No 31 2.23 Yes 0 0 No -21 0.4 No 27 73.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190737339 + NM_000534 PMS1 0 . . . 4.82 70.82 22 7.27 Yes 59 -2.4 No 0 0 No -21 0.91 Yes 44 53.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215652640 - NM_000465 BARD1 0 . . . 4.73 75.65 20 6.08 Yes 58 0.51 No 0 0 No -19 0.48 No 42 73.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59758959 - NM_032043 BRIP1 0 . . . 5.02 79.38 18 4.12 No 9 0.46 No 0 0 No -36 0.54 No 49 70.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69118784 + NM_133509 RAD51B 0 . . . 3.83 78.08 22 5.27 No 4 0.76 No 0 0 No -26 0.58 No 31 58.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68829537 + NM_133509 RAD51B 0 . . . 2.72 76.63 25 4.7 No 67 -4.96 No 0 0 No -24 0.81 Yes 48 79.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190670265 + NM_000534 PMS1 0 . . . 4.19 69.85 15 5.29 No 3 0.07 No 0 0 No -23 0.83 Yes 42 60.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68846332 + NM_004360 CDH1 0 . . . 0.14 0 23 5.39 No 63 -3.96 No 0 0 No -22 0.72 Yes 50 74.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131935174 + NM_005732 RAD50 0 . . . 3.81 75.78 19 6.13 Yes 63 -3.63 No 0 0 No -22 0.31 No 46 28.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131897462 + NM_005732 RAD50 0 . . . 7 77.53 29 6.97 Yes 22 0.95 Yes 0 0 No -29 0.74 Yes 36 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108201574 + NM_000051 ATM 0 . . . 0.84 73.58 35 6.69 Yes 6 0.37 No 0 0 No -35 0.62 No 46 72.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68846556 + NM_004360 CDH1 0 . . . 6.22 78.39 22 7.96 Yes 6 0.97 Yes 0 0 No -21 0.81 Yes 46 61.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68386703 + NM_133509 RAD51B 0 . . . 11.71 98.31 20 6.79 Yes 55 -2.24 No 0 0 No -26 0.46 No 45 28.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68759325 + NM_133509 RAD51B 0 . . . 5.02 82.47 22 5.32 No 5 0.9 Yes 0 0 No -21 0.47 No 44 85.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6042429 - NM_000535 PMS2 0 . . . 1.55 60.93 21 4.9 No 14 1.48 Yes 0 0 No -20 0.85 Yes 29 82.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190678982 + NM_000534 PMS1 0 . . . 2 69.75 21 6.07 Yes 4 0.5 No 0 0 No -20 0.69 Yes 44 77.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68858438 + NM_004360 CDH1 0 . . . 0.46 65.8 16 4.69 No 21 0.33 No 0 0 No -21 0.38 No 37 58.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68810381 + NM_004360 CDH1 0 . . . 0.91 81.22 32 6.17 Yes 76 -5.44 No 0 0 No -31 0.93 Yes 44 81.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29133729 - NM_001005735 CHEK2 0 . . . 1.75 76.95 27 5.29 No -2 0.23 No 0 0 No -26 0.9 Yes 51 79.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68969350 + NM_133509 RAD51B 0 . . . 3.31 78.66 25 5.01 No 4 1.21 Yes 0 0 No -23 0.37 No 54 32.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190695091 + NM_000534 PMS1 0 . . . 3.48 73.94 30 5.38 No 72 1.45 Yes 0 0 No -22 0.49 No 51 81.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68999846 + NM_133509 RAD51B 0 . . . 7.28 82.33 21 5.02 No 54 -2.94 No 0 0 No -20 0.45 No 46 30.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89646148 + NM_000314 PTEN 0 . . . 4.02 69.42 32 3.94 No 55 1.01 Yes 0 0 No -27 0.7 Yes 29 37.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6021883 - NM_000535 PMS2 0 . . . 4.02 77.74 27 6.69 Yes 58 -3.87 No 0 0 No -26 0.83 Yes 48 53.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68974558 + NM_133509 RAD51B 0 . . . 4.91 81.71 22 5.1 No 8 0.46 No 0 0 No -21 0.88 Yes 47 89.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56778472 + NM_058216 RAD51C 0 . . . 1.07 78.8 24 4.74 No 36 1.15 Yes 0 0 No -21 0.78 Yes 22 89.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68823007 + NM_004360 CDH1 0 . . . 4.51 83.52 18 4.69 No 38 1.41 Yes 0 0 No -21 0.4 No 44 80.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104163596 - NM_001100119 XRCC3 0 . . . 2.68 73.38 35 5.87 Yes 10 -1.87 No 0 0 No -34 0.84 Yes 48 51.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33446665 - NM_002878 RAD51D 0 . . . 2.82 69.13 10 4.8 No -4 0.39 No 0 0 No -39 0.48 No 50 36.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89653023 + NM_000314 PTEN 0 . . . 0.14 71.8 19 4.34 No 22 0.56 No 0 0 No -18 0.35 No 47 37.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41012773 + NM_001164269 RAD51 0 . . . 4.77 66.31 44 7.53 Yes 70 -3.31 No 0 0 No -24 0.86 Yes 49 88.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32947682 + NM_000059 BRCA2 0 . . . 1.23 57.99 30 5.38 No -4 1.22 Yes 0 0 No -29 0.5 No 53 23.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89721427 + NM_000314 PTEN 0 . . . 2.44 79.46 19 4.27 No 11 1.17 Yes 0 0 No -40 0.62 No 47 69.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68870939 + NM_133509 RAD51B 0 . . . 1.9 71.75 29 6.05 Yes 33 0.8 Yes 0 0 No -24 0.29 No 25 70.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89643460 + NM_000314 PTEN 0 . . . 2.76 68.52 21 4.35 No 2 0.27 No 0 0 No -20 0.91 Yes 56 41.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131954201 + NM_005732 RAD50 0 . . . 2.88 68.44 32 5.18 No 45 0.98 Yes 0 0 No -31 0.56 No 38 32.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47775460 + NM_000251 MSH2 0 . . . 2.2 0 32 4.39 No 15 0.24 No 0 0 No -25 0.41 No 43 75.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23629908 - NM_024675 PALB2 0 . . . 3.82 69.31 35 6.15 Yes 64 0.93 Yes 0 0 No -19 0.41 No 37 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89661847 + NM_000314 PTEN 0 . . . 7.45 74.42 33 6.07 Yes 36 0.94 Yes 0 0 No -29 0.72 Yes 39 87.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108164283 + NM_000051 ATM 0 . . . 0.81 76.29 17 4.8 No 0 0.35 No 0 0 No -48 0.56 No 40 73.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68589514 + NM_133509 RAD51B 0 . . . 6.31 76.17 21 5.2 No 72 -5.51 No 0 0 No -20 0.69 Yes 46 45.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68799612 + NM_004360 CDH1 0 . . . 8.48 82.63 26 5.66 Yes 17 1.91 Yes 0 0 No -23 0.36 No 41 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37093912 + NM_000249 MLH1 0 . . . 1.94 66.11 19 4.89 No 47 0.63 No 0 0 No -42 0.67 Yes 42 47.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104171130 - NM_001100119 XRCC3 0 . . . 2.54 70.22 16 3.77 No 2 -1.81 No 0 0 No -15 0.59 No 47 50.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68831653 + NM_133509 RAD51B 0 . . . 3.4 0 22 5.1 No 41 0.84 Yes 0 0 No -19 0.3 No 43 70.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105188355 + NM_021930 RINT1 0 . . . 3.1 85.02 27 5.11 No 3 1.02 Yes 0 0 No -26 0.63 No 55 59.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1225480 + NM_000455 STK11 0 . . . 0.11 74.73 14 4.47 No 34 1.03 Yes 0 0 No -19 0.43 No 38 26.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68308112 + NM_133509 RAD51B 0 . . . 5.52 76.64 36 6.15 Yes 34 0.34 No 0 0 No -18 0.76 Yes 44 67.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59786583 - NM_032043 BRIP1 0 . . . 1.19 73.81 28 5.63 Yes -3 0.24 No 0 0 No -27 0.9 Yes 53 26.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68603469 + NM_133509 RAD51B 0 . . . 10.23 86.54 19 4.72 No 2 1.6 Yes 0 0 No -22 0.5 No 41 47.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190655089 + NM_000534 PMS1 0 . . . 3.85 72.57 19 4.98 No 59 1.25 Yes 0 0 No -43 0.85 Yes 47 82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1212726 + NM_000455 STK11 0 . . . 6.73 85.02 15 5.19 No 9 1.3 Yes 0 0 No -49 0.56 No 49 92.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190660439 + NM_000534 PMS1 0 . . . 7.52 78.69 22 4.75 No 50 0.8 Yes 0 0 No -25 0.77 Yes 40 49.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90995894 - NM_002485 NBN 0 . . . 3.14 84.73 33 6.53 Yes 62 -2.51 No 0 0 No -32 0.93 Yes 38 47.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68769737 + NM_133509 RAD51B 0 . . . 5.92 85.16 21 4.8 No 48 -4.08 No 0 0 No -21 0.6 No 42 74.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59892453 - NM_032043 BRIP1 0 . . . 4.55 0 25 5.48 No 34 0.09 No 0 0 No -25 0.41 No 24 96.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68464560 + NM_133509 RAD51B 0 . . . 5.46 75.06 14 4.82 No 46 1.72 Yes 0 0 No -22 0.78 Yes 12 75.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131978952 + NM_005732 RAD50 0 . . . 0.21 0 28 3.67 No 75 1.31 Yes 0 0 No -27 0.56 No 33 34.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89694672 + NM_000314 PTEN 0 . . . 3.4 76.63 24 5.48 No 67 -4.96 No 0 0 No -23 0.67 Yes 48 51.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68936994 + NM_133509 RAD51B 0 . . . 3.92 67.7 23 4.86 No 17 1.13 Yes 0 0 No -27 0.86 Yes 41 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190709837 + NM_000534 PMS1 0 . . . 1.51 81.44 17 4.8 No 13 1.6 Yes 0 0 No -37 0.68 Yes 45 91.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29138422 - NM_001005735 CHEK2 0 . . . 5.29 74.8 34 6.24 Yes 22 1.83 Yes 0 0 No -20 0.78 Yes 36 72.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59942329 - NM_032043 BRIP1 0 . . . 5.2 85.02 26 5.2 No 5 1.23 Yes 0 0 No -26 0.64 No 53 78.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23616776 - NM_024675 PALB2 0 . . . 2.41 80.22 17 5.2 No 10 0.45 No 0 0 No -24 0.45 No 48 82.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59920045 - NM_032043 BRIP1 0 . . . 0.13 69.56 29 5.96 Yes 61 -4.96 No 0 0 No -28 0.63 No 47 68.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37053210 + NM_000249 MLH1 0 . . . 7.79 75.35 31 5.41 No 72 0.17 No 0 0 No -28 0.47 No 42 50.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69095834 + NM_133509 RAD51B 0 . . . 1.91 85.19 38 5.62 Yes 50 0.85 Yes 0 0 No -22 0.57 No 48 58.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48008384 + NM_000179 MSH6 0 . . . 6.86 80.43 32 6.37 Yes 33 0.88 Yes 0 0 No -26 0.36 No 39 73.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69116462 + NM_133509 RAD51B 0 . . . 1.76 68.65 16 4.69 No 36 -3.23 No 0 0 No -18 0.32 No 49 73.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89694094 + NM_000314 PTEN 0 . . . 4.56 73.46 23 5.39 No 51 1.1 Yes 0 0 No -22 0.61 No 50 55.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69024030 + NM_133509 RAD51B 0 . . . 2.68 69.16 40 6.24 Yes 15 0.07 No 0 0 No -39 0.83 Yes 43 63.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89631296 + NM_000314 PTEN 0 . . . 5.49 87.96 52 8.03 Yes 67 0.27 No 0 0 No -51 0.75 Yes 43 54.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69071284 + NM_133509 RAD51B 0 . . . 4.78 73.68 17 6.93 Yes 73 1.65 Yes 0 0 No -29 0.42 No 45 67.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68379858 + NM_133509 RAD51B 0 . . . 5.81 70.83 37 6.56 Yes 38 1.54 Yes 0 0 No -33 0.53 No 41 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56785385 + NM_058216 RAD51C 0 . . . 5.6 77.74 15 4.29 No 22 0.75 No 0 0 No -33 0.69 Yes 47 50.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89730567 + NM_000314 PTEN 0 . . . 4.13 84.35 18 5.18 No 31 1.03 Yes 0 0 No -27 0.71 Yes 33 48.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1210239 + NM_000455 STK11 0 . . . 0.34 77.48 21 5.2 No 14 -0.92 No 0 0 No -20 0.78 Yes 44 29.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68299142 + NM_133509 RAD51B 0 . . . 1.92 78.89 21 4.1 No 45 -5.12 No 0 0 No -20 0.57 No 47 64.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68333180 + NM_133509 RAD51B 0 . . . 2.9 65.71 13 4.92 No 0 0.46 No 0 0 No -24 0.48 No 47 70.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190738760 + NM_000534 PMS1 0 . . . 3.14 70.76 17 5.74 Yes 29 -1.73 No 0 0 No -23 0.62 No 47 64.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131977143 + NM_005732 RAD50 0 . . . 3.12 86.57 28 6.21 Yes 38 -1.35 No 0 0 No -33 0.34 No 50 74.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108132318 + NM_000051 ATM 0 . . . 5.72 75.66 37 6.32 Yes 17 0.24 No 0 0 No -22 0.67 Yes 41 49.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59932061 - NM_032043 BRIP1 0 . . . 3.97 84.41 17 10.35 Yes 15 1.46 Yes 0 0 No -25 0.69 Yes 43 88.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108185328 + NM_000051 ATM 0 . . . 1.22 59.33 50 5.72 Yes 2 0.47 No 0 0 No -32 0.48 No 44 54.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21970834 - NM_000077 CDKN2A 0 . . . 4.05 87.81 24 4.72 No 45 0.66 No 0 0 No -38 0.84 Yes 52 88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69053109 + NM_133509 RAD51B 0 . . . 0.29 59.53 22 4.5 No 53 2.25 Yes 0 0 No -21 0.87 Yes 10 47.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94175593 - NM_005591 MRE11 0 . . . 4.27 77.33 17 4.31 No -4 -1.22 No 0 0 No -46 0.45 No 44 68.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68776942 + NM_133509 RAD51B 0 . . . 4.22 82.9 19 4.9 No 9 0.25 No 0 0 No -52 0.58 No 49 54.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90978704 - NM_002485 NBN 0 . . . 5.73 77.49 26 4.37 No 5 0.64 No 0 0 No -29 0.65 No 45 50.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59855056 - NM_032043 BRIP1 0 . . . 0.3 60.91 16 5.29 No 60 -4.81 No 0 0 No -15 0.3 No 49 45.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69044080 + NM_133509 RAD51B 0 . . . 4.59 74.99 30 5.47 No 26 0.56 No 0 0 No -27 0.28 No 32 93.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59775775 - NM_032043 BRIP1 0 . . . 5.49 83.23 17 4.58 No 65 0.4 No 0 0 No -16 0.81 Yes 46 87.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105203403 + NM_021930 RINT1 0 . . . 2.18 66.14 20 4.52 No 62 0.4 No 0 0 No -25 0.53 No 41 24.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68587672 + NM_133509 RAD51B 0 . . . 8.27 86.39 46 8.82 Yes 49 0.85 Yes 0 0 No -32 0.58 No 46 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68821337 + NM_133509 RAD51B 0 . . . 1.4 76.07 46 6.47 Yes 4 0.13 No 0 0 No -20 0.84 Yes 54 87.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69022197 + NM_133509 RAD51B 0 . . . 3.87 75.58 19 3.84 No 30 -2.6 No 0 0 No -18 0.86 Yes 46 80.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68839895 + NM_004360 CDH1 0 . . . 7.21 90.14 20 5.1 No 66 -2.18 No 0 0 No -23 0.42 No 44 67.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94184178 - NM_005591 MRE11 0 . . . 3.76 77.98 27 6.72 Yes 31 1.67 Yes 0 0 No -26 0.53 No 53 47.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68870762 + NM_133509 RAD51B 0 . . . 4.64 75.87 23 5 No 1 0.43 No 0 0 No -18 0.7 Yes 42 58.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52433963 - NM_004656 BAP1 0 . . . 5.33 78.4 16 4.95 No 76 -3.61 No 0 0 No -20 0.79 Yes 53 64.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37074963 + NM_000249 MLH1 0 . . . 1.31 67 10 4 No 64 0.52 No 0 0 No -22 0.84 Yes 44 53.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68849990 + NM_133509 RAD51B 0 . . . 2.37 68.67 15 5.39 No 32 1.73 Yes 0 0 No -26 0.4 No 56 33.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89650438 + NM_000314 PTEN 0 . . . 1.51 60.51 17 5.74 Yes 40 1.44 Yes 0 0 No -30 0.48 No 11 67.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68484031 + NM_133509 RAD51B 0 . . . 3.36 86.71 29 5.91 Yes 33 1.22 Yes 0 0 No -28 0.85 Yes 50 70.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68366817 + NM_133509 RAD51B 0 . . . 2.5 70.07 37 6.66 Yes 21 1.32 Yes 0 0 No -26 0.82 Yes 37 94.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68800086 + NM_133509 RAD51B 0 . . . 4.28 78.64 15 5.7 Yes 71 -5.37 No 0 0 No -31 0.5 No 51 30.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674526 + NM_000251 MSH2 0 . . . 2 80.34 33 5.94 Yes 32 1.13 Yes 0 0 No -23 0.56 No 42 62.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47677134 + NM_000251 MSH2 0 . . . 2.75 77.27 40 7.55 Yes 16 0.76 No 0 0 No -29 0.45 No 39 42.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6018519 - NM_000535 PMS2 0 . . . 2.77 66.22 17 4.8 No 1 -2.03 No 0 0 No -16 0.27 No 58 42.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68811845 + NM_004360 CDH1 0 . . . 1.04 70.83 27 5.63 Yes 33 1.61 Yes 0 0 No -26 0.68 Yes 25 65.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59899946 - NM_032043 BRIP1 0 . . . 0.16 63.68 21 5.86 Yes 22 1.04 Yes 0 0 No -20 0.72 Yes 36 69.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94172445 - NM_005591 MRE11 0 . . . 5.21 81.46 36 5.54 No 52 0.91 Yes 0 0 No -30 0.7 Yes 41 68.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68869383 + NM_133509 RAD51B 0 . . . 6.76 75.87 29 7 Yes 55 0.2 No 0 0 No -28 0.64 No 50 59.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131978165 + NM_005732 RAD50 0 . . . 5.32 82.98 15 4.58 No 22 -1.68 No 0 0 No -57 0.64 No 45 74.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108158441 + NM_000051 ATM 0 . . . 10.55 89.15 11 4.8 No 6 0.93 Yes 0 0 No -20 0.82 Yes 52 76.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190671334 + NM_000534 PMS1 0 . . . 4.16 76.09 15 4.58 No 33 1.17 Yes 0 0 No -58 0.84 Yes 25 37.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89716251 + NM_000314 PTEN 0 . . . 5.08 70.23 27 7.04 Yes 17 0.75 No 0 0 No -29 0.81 Yes 41 83.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108194265 + NM_000051 ATM 0 . . . 4.95 72.49 15 5.71 Yes 11 0.2 No 0 0 No -28 0.29 No 41 82.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68949036 + NM_133509 RAD51B 0 . . . 1.07 0 34 5.28 No 72 1.83 Yes 0 0 No -31 0.5 No 41 71.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68574474 + NM_133509 RAD51B 0 . . . 1.09 67.53 18 4.93 No 66 0.4 No 0 0 No -35 0.54 No 43 83.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69151738 + NM_133509 RAD51B 0 . . . 1.7 81.63 31 6.08 Yes 4 -1.07 No 0 0 No -31 0.64 No 54 8.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69026939 + NM_133509 RAD51B 0 . . . 3.66 71.78 15 4.92 No 26 0.04 No 0 0 No -26 0.4 No 46 84.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69090198 + NM_133509 RAD51B 0 . . . 0.38 69.98 21 5.18 No -2 0.17 No 0 0 No -21 0.33 No 49 49.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41263694 - NM_007294 BRCA1 0 . . . 1.49 68.06 26 5 No 52 0.9 Yes 0 0 No -25 0.86 Yes 48 65.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32898882 + NM_000059 BRCA2 0 . . . 1.28 80.65 66 8.04 Yes 3 0.81 Yes 0 0 No -47 0.47 No 50 90.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68770424 + NM_133509 RAD51B 0 . . . 0.73 0 32 5.65 Yes 33 0.3 No 0 0 No -37 0.63 No 32 41.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59846333 - NM_032043 BRIP1 0 . . . 1.95 61.23 20 5.47 No 57 -2.4 No 0 0 No -19 0.55 No 44 76.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59868391 - NM_032043 BRIP1 0 . . . 4.59 75.71 22 5.29 No 46 0.14 No 0 0 No -21 0.73 Yes 40 86.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68536624 + NM_133509 RAD51B 0 . . . 4.81 78.75 29 6.85 Yes 8 1 Yes 0 0 No -28 0.76 Yes 45 53.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215662362 - NM_000465 BARD1 0 . . . 0.36 54.16 25 5.2 No 66 0.62 No 0 0 No -24 0.78 Yes 32 55.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56778168 + NM_058216 RAD51C 0 . . . 0.97 68.29 27 5.39 No 54 0.76 No 0 0 No -26 0.57 No 32 47.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68563858 + NM_133509 RAD51B 0 . . . 5.84 71.41 54 6.79 Yes 56 -1.58 No 0 0 No -37 0.68 Yes 46 68.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59762365 - NM_032043 BRIP1 0 . . . 3.49 76.48 24 4.9 No 76 -2.6 No 0 0 No -41 0.59 No 40 67.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68883283 + NM_133509 RAD51B 0 . . . 0.27 71.03 47 8.72 Yes 12 0.13 No 0 0 No -46 0.77 Yes 50 30.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21979098 - NM_000077 CDKN2A 0 . . . 2.98 76.87 18 3.45 No 51 1.26 Yes 0 0 No -21 0.4 No 41 62.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68578876 + NM_133509 RAD51B 0 . . . 2.77 73.19 23 4.59 No -1 0.27 No 0 0 No -22 0.67 Yes 51 65.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59844238 - NM_032043 BRIP1 0 . . . 1.63 71.58 22 6.08 Yes 28 1.14 Yes 0 0 No -28 0.51 No 44 74.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68371618 + NM_133509 RAD51B 0 . . . 7.75 88.52 18 4.58 No 65 -1.78 No 0 0 No -17 0.81 Yes 48 67.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47792980 + NM_000251 MSH2 0 . . . 8.46 88 28 5.05 No 20 0.21 No 0 0 No -27 0.6 No 45 47.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108115972 + NM_000051 ATM 0 . . . 4.42 63.52 24 6.08 Yes 19 0.23 No 0 0 No -23 0.93 Yes 39 81.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68878012 + NM_133509 RAD51B 0 . . . 1.12 70.48 12 5.39 No 18 1.92 Yes 0 0 No -28 0.31 No 40 71.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68824881 + NM_004360 CDH1 0 . . . 0.98 75.21 13 4.33 No 17 0.82 Yes 0 0 No -44 0.43 No 41 71.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47701576 + NM_000251 MSH2 0 . . . 4.21 75.47 31 5.83 Yes 45 -2.49 No 0 0 No -30 0.77 Yes 40 69.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21982278 - NM_000077 CDKN2A 0 . . . 1.39 69.01 75 7.1 Yes 26 0.44 No 0 0 No -22 0.57 No 42 54.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69142802 + NM_133509 RAD51B 0 . . . 4.8 82.78 15 4.99 No 45 1.13 Yes 0 0 No -51 0.51 No 46 69.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68759705 + NM_133509 RAD51B 0 . . . 0.43 78.47 30 5.66 Yes 5 1.03 Yes 0 0 No -25 0.6 No 32 77.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21990757 - NM_000077 CDKN2A 0 . . . 2.73 68.98 17 5.29 No 66 -6.17 No 0 0 No -26 0.71 Yes 48 45.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47742258 + NM_000251 MSH2 0 . . . 4.5 67.36 15 5.2 No 15 0.18 No 0 0 No -20 0.63 No 47 75.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68751000 + NM_133509 RAD51B 0 . . . 8.21 83.52 14 4.47 No 27 0.84 Yes 0 0 No -29 0.67 Yes 31 88.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68780538 + NM_133509 RAD51B 0 . . . 4.9 80.35 30 5.83 Yes 10 0.04 No 0 0 No -29 0.89 Yes 50 49.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94204087 - NM_005591 MRE11 0 . . . 4.11 70.69 21 5 No 19 -1.38 No 0 0 No -20 0.53 No 44 61.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68764570 + NM_133509 RAD51B 0 . . . 0.63 69.58 18 5.41 No 72 -5.42 No 0 0 No -24 0.45 No 48 48.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6036562 - NM_000535 PMS2 0 . . . 1.28 66.99 16 4.69 No 61 1.45 Yes 0 0 No -20 0.31 No 51 23.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190672748 + NM_000534 PMS1 0 . . . 6.4 74.76 31 4.92 No 75 0.04 No 0 0 No -30 0.5 No 41 81.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89702591 + NM_000314 PTEN 0 . . . 0.88 58.26 22 3.69 No 55 0.4 No 0 0 No -21 0.7 Yes 43 16.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68709076 + NM_133509 RAD51B 0 . . . 4.12 78.32 22 4.94 No 42 -2.45 No 0 0 No -21 0.86 Yes 48 69.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29108177 - NM_001005735 CHEK2 0 . . . 0.19 75.33 28 5.21 No 11 1.21 Yes 20 0.45 Yes -27 0.27 No 47 92.97 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr9 21987551 - NM_000077 CDKN2A 0 . . . 0.18 0 18 4.9 No 53 -2.91 No 0 0 No -22 0.7 Yes 39 71.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68819242 + NM_133509 RAD51B 0 . . . 5.1 85.41 14 7.33 Yes 76 -1.7 No 0 0 No -23 0.52 No 47 67.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68996101 + NM_133509 RAD51B 0 . . . 6.95 89.48 34 7.64 Yes 10 1.21 Yes 0 0 No -33 0.62 No 48 94.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32897226 + NM_000059 BRCA2 0 . . . 3.5 75.08 32 7.33 Yes 16 1.33 Yes 0 0 No -31 0.57 No 50 93.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41240035 - NM_007294 BRCA1 0 . . . 0.65 74.23 16 4.69 No 43 -3.19 No 0 0 No -46 0.7 Yes 54 77.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68376979 + NM_133509 RAD51B 0 . . . 3.77 75.36 39 5.25 No 7 0.38 No 0 0 No -24 0.51 No 51 72.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190664221 + NM_000534 PMS1 0 . . . 3.6 80.29 26 5.2 No 16 1.28 Yes 0 0 No -26 0.58 No 48 69.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75494094 - NM_001040108 MLH3 0 . . . 0.75 79.94 42 6.59 Yes 53 0.63 No 0 0 No -41 0.62 No 52 75.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59834591 - NM_032043 BRIP1 0 . . . 8.29 89.89 50 7.77 Yes 15 0.55 No 0 0 No -20 0.58 No 43 94.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59904403 - NM_032043 BRIP1 0 . . . 5.03 74.5 30 6.99 Yes 48 0.77 Yes 0 0 No -29 0.62 No 46 63.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47648118 + NM_000251 MSH2 0 . . . 0.85 74.47 24 4.78 No 4 0.1 No 0 0 No -23 0.78 Yes 54 79.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68974486 + NM_133509 RAD51B 0 . . . 3.63 79.6 32 5.74 Yes 68 0.79 Yes 0 0 No -26 0.4 No 52 69.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59821454 - NM_032043 BRIP1 0 . . . 2.73 70.07 10 4 No -2 0.88 Yes 0 0 No -28 0.71 Yes 38 43.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68400423 + NM_133509 RAD51B 0 . . . 5.79 75.6 73 8.68 Yes 34 1.05 Yes 0 0 No -32 0.51 No 24 89.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40994257 + NM_001164269 RAD51 0 . . . 0.11 80.49 17 6.08 Yes 35 1.69 Yes 0 0 No -16 0.55 No 23 38.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37038466 + NM_000249 MLH1 0 . . . 2.95 62.97 48 4.02 No 59 0.32 No 0 0 No -28 0.34 No 45 38.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105175556 + NM_021930 RINT1 0 . . . 4.52 76.93 18 5.37 No 76 -3.91 No 0 0 No -17 0.81 Yes 54 64.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68479084 + NM_133509 RAD51B 0 . . . 2.21 71.8 18 7.32 Yes 55 1.14 Yes 0 0 No -23 0.7 Yes 53 56.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37083251 + NM_000249 MLH1 0 . . . 1.76 71.96 25 5.28 No 34 0.02 No 0 0 No -25 0.72 Yes 45 96.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68798968 + NM_133509 RAD51B 0 . . . 0.09 61.17 20 4.8 No 24 0.6 No 0 0 No -19 0.86 Yes 26 87.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68800362 + NM_004360 CDH1 0 . . . 0.6 81.34 16 3.83 No 76 1.47 Yes 0 0 No -29 0.64 No 52 57.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131969292 + NM_005732 RAD50 0 . . . 5.01 0 18 4.58 No 41 1.86 Yes 0 0 No -17 0.85 Yes 35 92.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131949185 + NM_005732 RAD50 0 . . . 2.99 83.27 15 4.58 No 64 1.39 Yes 0 0 No -26 0.69 Yes 46 83.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68659273 + NM_133509 RAD51B 0 . . . 2.53 70.31 23 6.08 Yes 51 1.33 Yes 0 0 No -22 0.59 No 45 43.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69033318 + NM_133509 RAD51B 0 . . . 9.01 86.14 27 5.57 Yes 5 1.54 Yes 0 0 No -24 0.49 No 53 50.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94195571 - NM_005591 MRE11 0 . . . 3.91 70.74 16 4.69 No 75 0.77 Yes 0 0 No -20 0.48 No 43 84.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68486541 + NM_133509 RAD51B 0 . . . 0.83 63.14 14 5.45 No 62 0.14 No 0 0 No -53 0.36 No 19 79.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68826059 + NM_004360 CDH1 0 . . . 6.21 82.31 27 5.65 Yes 4 0.68 No 0 0 No -26 0.71 Yes 54 68.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94150766 - NM_005591 MRE11 0 . . . 4.18 66.72 24 5.19 No 16 0.75 No 0 0 No -23 0.94 Yes 45 33.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32896139 + NM_000059 BRCA2 0 . . . 2.9 73.41 25 4.75 No 53 1.05 Yes 0 0 No -24 0.73 Yes 44 56.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47727521 + NM_000251 MSH2 0 . . . 3.81 74.57 25 5 No 21 0.91 Yes 0 0 No -28 0.45 No 37 65.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190736442 + NM_000534 PMS1 0 . . . 4.57 0 34 6.18 Yes 62 0.86 Yes 0 0 No -33 0.31 No 50 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59795647 - NM_032043 BRIP1 0 . . . 2.41 71.81 21 4.53 No 17 0.84 Yes 0 0 No -25 0.66 No 41 73.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41257951 - NM_007294 BRCA1 0 . . . 1.9 78.8 25 4.9 No 9 -1.91 No 0 0 No -42 0.66 Yes 14 56.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68842838 + NM_133509 RAD51B 0 . . . 1.13 73.94 34 7.14 Yes 64 -3.56 No 0 0 No -33 0.78 Yes 60 26.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68750864 + NM_133509 RAD51B 0 . . . 0.85 0 16 4.69 No 71 1.3 Yes 0 0 No -36 0.44 No 35 48.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131962007 + NM_005732 RAD50 0 . . . 2.52 67.06 13 5.37 No 19 1.05 Yes 0 0 No -26 0.76 Yes 39 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89673974 + NM_000314 PTEN 0 . . . 0.32 62.98 20 4.9 No 52 0.57 No 0 0 No -27 0.49 No 45 83.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68772968 + NM_133509 RAD51B 0 . . . 3.64 66.76 17 5.38 No 17 0.6 No 0 0 No -19 0.41 No 37 69.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108126882 + NM_000051 ATM 0 . . . 0.05 74.66 29 5.66 Yes 33 1.15 Yes 0 0 No -28 0.96 Yes 21 62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47662846 + NM_000251 MSH2 0 . . . 3.92 86.29 23 4.89 No 10 1.27 Yes 0 0 No -23 0.88 Yes 48 92.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190726582 + NM_000534 PMS1 0 . . . 12.54 96.62 32 7.1 Yes 76 0.56 No 0 0 No -31 0.97 Yes 38 78.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131933841 + NM_005732 RAD50 0 . . . 2.64 69.76 16 6.06 Yes 16 1.17 Yes 0 0 No -23 0.38 No 42 95.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68822719 + NM_133509 RAD51B 0 . . . 5.42 91.88 18 4.9 No 7 0.82 Yes 0 0 No -25 0.85 Yes 47 80.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48035697 + NM_000179 MSH6 0 . . . 0.17 0 31 5.85 Yes 39 1.29 Yes 0 0 No -30 0.55 No 45 25.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89645298 + NM_000314 PTEN 0 . . . 1.62 76.55 33 6.13 Yes 50 0.5 No 0 0 No -26 0.44 No 15 34.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41025835 + NM_001164269 RAD51 0 . . . 6.6 77.19 26 3.84 No 3 0.52 No 0 0 No -19 0.56 No 32 81.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59925169 - NM_032043 BRIP1 0 . . . 5 67.17 12 4.11 No 63 1.03 Yes 0 0 No -34 0.56 No 39 79.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68616924 + NM_133509 RAD51B 0 . . . 0.98 66.56 24 5.25 No 22 1.4 Yes 0 0 No -23 0.63 No 40 75.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131956297 + NM_005732 RAD50 0 . . . 4.82 75.46 11 4.67 No 41 0.58 No 0 0 No -38 0.49 No 32 84.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47656071 + NM_000251 MSH2 0 . . . 4.91 87.45 16 6.42 Yes 27 0.71 No 0 0 No -20 0.49 No 47 95.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41255477 - NM_007294 BRCA1 0 . . . 3.01 0 15 5.55 No 71 -2.76 No 0 0 No -29 0.6 No 36 60.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59885124 - NM_032043 BRIP1 0 . . . 0.65 65.64 31 5.48 No 58 0.38 No 0 0 No -24 0.58 No 47 53.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32935218 + NM_000059 BRCA2 0 . . . 0.21 0 64 8 Yes 62 -4.86 No 0 0 No -31 0.77 Yes 50 45.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68998859 + NM_133509 RAD51B 0 . . . 3.65 86.93 26 5.03 No 15 0.61 No 0 0 No -24 0.47 No 47 96.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68761357 + NM_133509 RAD51B 0 . . . 1.41 0 28 5.24 No 1 1.01 Yes 0 0 No -48 0.78 Yes 47 45.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47763982 + NM_000251 MSH2 0 . . . 4.62 74.59 48 7.29 Yes 9 0.82 Yes 0 0 No -27 0.48 No 46 51.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190673800 + NM_000534 PMS1 0 . . . 6.95 72.43 32 6.16 Yes 12 0.95 Yes 0 0 No -31 0.85 Yes 46 58.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68827904 + NM_004360 CDH1 0 . . . 4.58 74.93 26 6 Yes 59 -3.02 No 0 0 No -25 0.76 Yes 47 26.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40989670 + NM_001164269 RAD51 0 . . . 2.61 78.65 31 6.4 Yes 48 0.64 No 0 0 No -30 0.66 No 33 60.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131911389 + NM_005732 RAD50 0 . . . 1.28 68.94 18 4.79 No 29 0.84 Yes 0 0 No -20 0.53 No 29 97.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68915402 + NM_133509 RAD51B 0 . . . 5.1 73.74 23 4.73 No 75 0.17 No 0 0 No -22 0.79 Yes 43 82.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32947827 + NM_000059 BRCA2 0 . . . 2.56 0 22 4.8 No 44 -1.87 No 0 0 No -21 0.89 Yes 40 79.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104178080 - NM_001100119 XRCC3 0 . . . 6.3 80.29 20 7.14 Yes 10 1.07 Yes 0 0 No -19 0.61 No 48 79.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68434432 + NM_133509 RAD51B 0 . . . 8.82 89.22 35 5.83 Yes 72 0.89 Yes 0 0 No -34 0.86 Yes 46 83.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68566478 + NM_133509 RAD51B 0 . . . 2.12 71.6 25 6.12 Yes 36 -1.81 No 0 0 No -28 0.59 No 50 82.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215672633 - NM_000465 BARD1 0 . . . 1.87 61.48 24 4.82 No 5 -2.47 No 0 0 No -23 0.86 Yes 44 28.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41203918 - NM_007294 BRCA1 0 . . . 1.2 74.68 19 4.8 No 68 -3.94 No 0 0 No -18 0.88 Yes 54 64.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68792209 + NM_004360 CDH1 0 . . . 7.5 85.19 24 4.54 No 5 0.81 Yes 0 0 No -23 0.78 Yes 52 82.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59858312 - NM_032043 BRIP1 0 . . . 1.36 64.79 22 4.8 No 14 0 No 0 0 No -21 0.68 Yes 44 62.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69128800 + NM_133509 RAD51B 0 . . . 3.09 75.62 22 3.4 No 69 1.4 Yes 0 0 No -19 0.66 No 37 75.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32930199 + NM_000059 BRCA2 0 . . . 1.33 84.41 38 6.45 Yes 26 0.19 No 0 0 No -35 0.56 No 44 36.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105171386 + NM_021930 RINT1 0 . . . 0.72 74.68 28 7.14 Yes 60 0.88 Yes 0 0 No -27 0.5 No 38 46.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68880450 + NM_133509 RAD51B 0 . . . 0.86 54.25 17 4.79 No 68 1.61 Yes 0 0 No -22 0.93 Yes 33 73.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94221476 - NM_005591 MRE11 0 . . . 5.82 75.98 20 4.99 No 71 0.46 No 0 0 No -23 0.52 No 40 79.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6044180 - NM_000535 PMS2 0 . . . 1.87 80.12 25 5.37 No 6 1.13 Yes 0 0 No -25 0.5 No 52 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59837744 - NM_032043 BRIP1 0 . . . 9.07 86.73 19 5.39 No 43 1.87 Yes 0 0 No -24 0.74 Yes 42 71.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68354372 + NM_133509 RAD51B 0 . . . 6.6 81.94 36 4.98 No 17 -1.96 No 0 0 No -30 0.85 Yes 47 77.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190665276 + NM_000534 PMS1 0 . . . 6.55 87.71 40 6.26 Yes 4 0.59 No 0 0 No -21 0.37 No 54 49.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68580981 + NM_133509 RAD51B 0 . . . 3.1 64.21 31 6.01 Yes 53 0.94 Yes 0 0 No -22 0.7 Yes 46 67.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68802540 + NM_133509 RAD51B 0 . . . 3.27 69.85 21 7.15 Yes 50 1.19 Yes 0 0 No -20 0.45 No 44 57.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190675069 + NM_000534 PMS1 0 . . . 0.21 75.06 33 5.74 Yes 31 -4.39 No 0 0 No -32 0.71 Yes 50 96.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56799188 + NM_058216 RAD51C 0 . . . 4.66 78.18 27 5.72 Yes 13 0.79 Yes 0 0 No -26 0.58 No 45 83.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33439361 - NM_002878 RAD51D 0 . . . 0.36 74.68 15 10.52 Yes 72 -4.11 No 0 0 No -25 0.31 No 54 66.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59884105 - NM_032043 BRIP1 0 . . . 2.63 76.63 18 4.68 No 51 -4.54 No 0 0 No -22 0.86 Yes 47 33.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59898542 - NM_032043 BRIP1 0 . . . 8.42 83.24 15 5.22 No 46 1.41 Yes 0 0 No -24 0.6 No 45 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108159402 + NM_000051 ATM 0 . . . 1.04 72.02 22 5.65 Yes -4 0.61 No 0 0 No -21 0.9 Yes 45 78.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48035995 + NM_000179 MSH6 0 . . . 1.58 0 22 4.98 No 70 -4.27 No 0 0 No -42 0.51 No 50 91.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47806440 + NM_000251 MSH2 0 . . . 8.51 86.08 24 5 No 76 0.95 Yes 0 0 No -23 0.82 Yes 44 70.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108121922 + NM_000051 ATM 0 . . . 8.84 80.95 20 7.14 Yes 39 1.45 Yes 0 0 No -28 0.61 No 43 64.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108193952 + NM_000051 ATM 0 . . . 3.52 70.81 26 6.67 Yes 40 0.46 No 0 0 No -25 0.86 Yes 51 44.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215638767 - NM_000465 BARD1 0 . . . 7.72 81.63 22 5.48 No 68 -4.89 No 0 0 No -21 0.61 No 49 47.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94197565 - NM_005591 MRE11 0 . . . 0.33 0 25 6.04 Yes 1 -1.88 No 0 0 No -24 0.54 No 33 84.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68859714 + NM_133509 RAD51B 0 . . . 6.13 83.95 39 5.9 Yes 28 1.09 Yes 0 0 No -38 0.48 No 42 72.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32913557 + NM_000059 BRCA2 0 . . . 1.84 78 23 5 No 53 0.36 No 0 0 No -26 0.83 Yes 48 56.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89641009 + NM_000314 PTEN 0 . . . 1.64 0 72 10.12 Yes 6 -2.25 No 0 0 No -32 0.54 No 34 61.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510121 - NM_001040108 MLH3 0 . . . 6.06 68.23 50 8.16 Yes 30 0.9 Yes 0 0 No -28 0.52 No 36 83.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6041523 - NM_000535 PMS2 0 . . . 1.08 84.22 33 5.45 No 33 0.59 No 0 0 No -29 0.54 No 45 64.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59777561 - NM_032043 BRIP1 0 . . . 2.57 77.17 24 4.8 No 15 0.75 No 0 0 No -23 0.63 No 40 95.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215601794 - NM_000465 BARD1 0 . . . 1.25 57.91 20 5.09 No 64 0.82 Yes 0 0 No -19 0.69 Yes 45 88.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59825859 - NM_032043 BRIP1 0 . . . 2.8 72.4 19 5 No 11 0.21 No 0 0 No -22 0.67 Yes 47 91.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37080779 + NM_000249 MLH1 0 . . . 4.99 69.49 21 4.56 No 1 0.15 No 0 0 No -34 0.43 No 53 82.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68638814 + NM_133509 RAD51B 0 . . . 3.32 74.22 32 6.16 Yes 70 0.99 Yes 0 0 No -31 0.57 No 39 61.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190654528 + NM_000534 PMS1 0 . . . 1.15 0 27 4.55 No 1 0.57 No 0 0 No -30 0.31 No 57 35.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37065942 + NM_000249 MLH1 0 . . . 2.83 0 25 5 No 17 1.18 Yes 0 0 No -22 0.67 Yes 52 55.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108239071 + NM_000051 ATM 0 . . . 0.14 54.55 25 5.93 Yes 44 -1.78 No 0 0 No -24 0.53 No 40 47.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47689455 + NM_000251 MSH2 0 . . . 3.15 68.34 21 5.48 No 23 1.56 Yes 0 0 No -20 0.66 Yes 40 50.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68906465 + NM_133509 RAD51B 0 . . . 6.82 75.1 29 5.2 No 55 0.19 No 0 0 No -28 0.48 No 48 81.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32917794 + NM_000059 BRCA2 0 . . . 4.78 77.62 28 4.26 No 22 0.87 Yes 0 0 No -27 0.7 Yes 36 59.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59892630 - NM_032043 BRIP1 0 . . . 2.8 65.04 15 6.48 Yes 52 -1.24 No 0 0 No -28 0.68 Yes 47 36.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69037403 + NM_133509 RAD51B 0 . . . 7.34 91.44 13 4.73 No 28 2.58 Yes 0 0 No -21 0.71 Yes 43 74.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68717802 + NM_133509 RAD51B 0 . . . 6.04 75.38 22 4.9 No 54 -3.91 No 0 0 No -21 0.46 No 45 89.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29084314 - NM_001005735 CHEK2 0 . . . 0.09 74.41 12 4.24 No 62 0.92 Yes 0 0 No -57 0.55 No 42 60.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68397138 + NM_133509 RAD51B 0 . . . 7 82.12 18 5.19 No 17 0.95 Yes 0 0 No -55 0.4 No 41 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131975880 + NM_005732 RAD50 0 . . . 8.22 90.26 29 5.48 No 17 1.35 Yes 0 0 No -28 0.92 Yes 41 64.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68812983 + NM_004360 CDH1 0 . . . 3.94 80.48 18 5.6 Yes 5 0.36 No 0 0 No -29 0.62 No 53 79.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23628491 - NM_024675 PALB2 0 . . . 1.68 69.1 21 4.58 No 27 1 Yes 0 0 No -20 0.77 Yes 47 86.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68527043 + NM_133509 RAD51B 0 . . . 2.59 70.92 28 5.83 Yes 35 0.15 No 0 0 No -27 0.75 Yes 39 79.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84398360 - NM_139076 FAM175A 0 . . . 4.11 72.67 29 6.15 Yes 75 -5.53 No 0 0 No -31 0.9 Yes 48 85.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108236930 + NM_000051 ATM 0 . . . 6.78 80.78 28 5.2 No 12 1.28 Yes 0 0 No -27 0.31 No 46 69.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47738933 + NM_000251 MSH2 0 . . . 1.03 72.29 31 5.66 Yes 52 -4.36 No 0 0 No -30 0.68 Yes 47 78.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94195730 - NM_005591 MRE11 0 . . . 3.96 76.16 34 5.63 Yes 36 0.91 Yes 0 0 No -23 0.45 No 50 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68947029 + NM_133509 RAD51B 0 . . . 7.38 87.14 38 6.24 Yes 62 1.27 Yes 0 0 No -29 0.69 Yes 55 41.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68819606 + NM_133509 RAD51B 0 . . . 4.63 88.37 19 4.69 No 63 0.96 Yes 0 0 No -18 0.92 Yes 40 36.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59880198 - NM_032043 BRIP1 0 . . . 4.64 77.51 21 5.19 No 40 0.37 No 0 0 No -20 0.86 Yes 49 51.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68373128 + NM_133509 RAD51B 0 . . . 4.75 77.58 15 4.58 No 53 1.27 Yes 0 0 No -32 0.42 No 47 73.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68849508 + NM_004360 CDH1 0 . . . 7.62 76.42 25 5.09 No 1 1.57 Yes 0 0 No -24 0.68 Yes 46 49.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131974333 + NM_005732 RAD50 0 . . . 0.84 70.48 17 4.8 No 68 -6.01 No 0 0 No -39 0.56 No 48 50.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131934300 + NM_005732 RAD50 0 . . . 0.12 0 21 5 No 53 0.39 No 0 0 No -60 0.32 No 57 50.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68970782 + NM_133509 RAD51B 0 . . . 1.92 69.12 25 5.53 No 31 0.64 No 0 0 No -24 0.69 Yes 27 82.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41249398 - NM_007294 BRCA1 0 . . . 1.45 66.81 20 5.1 No 63 1.27 Yes 0 0 No -19 0.58 No 55 79.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68448254 + NM_133509 RAD51B 0 . . . 1.58 76.25 26 6.21 Yes 62 -3.52 No 0 0 No -25 0.34 No 48 80.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68566124 + NM_133509 RAD51B 0 . . . 3.07 79.24 30 8.43 Yes 16 1.39 Yes 0 0 No -29 0.94 Yes 38 92.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56798778 + NM_058216 RAD51C 0 . . . 2.32 72.09 22 5.32 No 55 -4.54 No 0 0 No -33 0.56 No 47 89.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68291159 + NM_133509 RAD51B 0 . . . 1.69 73.96 15 4.58 No 7 0.88 Yes 0 0 No -57 0.5 No 51 76.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68755378 + NM_133509 RAD51B 0 . . . 2.51 69.96 28 5.83 Yes -2 0.66 No 0 0 No -27 0.83 Yes 45 88.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32888044 + NM_000059 BRCA2 0 . . . 0.48 0 14 4.23 No 21 0.36 No 0 0 No -17 0.73 Yes 37 48.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108181613 + NM_000051 ATM 0 . . . 3.7 66.29 16 6.27 Yes 47 0.46 No 0 0 No -24 0.63 No 43 51.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59913140 - NM_032043 BRIP1 0 . . . 0.58 0 49 6.93 Yes 56 1.1 Yes 0 0 No -22 0.61 No 44 71.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68627738 + NM_133509 RAD51B 0 . . . 7.74 80.84 29 5.18 No 5 0.42 No 0 0 No -28 0.86 Yes 53 85.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33426167 - NM_002878 RAD51D 0 . . . 0.52 76.66 22 6.37 Yes 60 -4.63 No 0 0 No -21 0.56 No 47 55.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68484332 + NM_133509 RAD51B 0 . . . 4.47 87.44 19 5.57 Yes 19 1.1 Yes 0 0 No -24 0.76 Yes 39 66.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105187256 + NM_021930 RINT1 0 . . . 0.53 64.19 15 5.2 No 69 -5.99 No 0 0 No -20 0.37 No 51 29.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68998089 + NM_133509 RAD51B 0 . . . 0.42 73.48 26 5.47 No 62 0.44 No 0 0 No -25 0.48 No 48 80.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68430908 + NM_133509 RAD51B 0 . . . 4.32 76.88 27 5.74 Yes 57 0.15 No 0 0 No -22 0.53 No 42 41.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851304 - NM_032043 BRIP1 0 . . . 7.57 84.38 14 4.47 No 44 1 Yes 0 0 No -18 0.54 No 40 58.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108120581 + NM_000051 ATM 0 . . . 4.02 81.66 19 5 No 0 0.53 No 0 0 No -23 0.16 No 52 62.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131921640 + NM_005732 RAD50 0 . . . 6.14 88.68 36 8.13 Yes 69 -3.37 No 0 0 No -35 0.81 Yes 50 87.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59908488 - NM_032043 BRIP1 0 . . . 5.54 83.87 36 5.89 Yes 39 1.65 Yes 0 0 No -25 0.61 No 43 77.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131960711 + NM_005732 RAD50 0 . . . 4.24 76.61 50 7.34 Yes 9 0.24 No 0 0 No -29 0.55 No 48 42.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6046788 - NM_000535 PMS2 0 . . . 2.57 0 17 6.93 Yes 10 1.08 Yes 0 0 No -16 0.45 No 48 68.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69009129 + NM_133509 RAD51B 0 . . . 9.59 96.47 45 5.83 Yes 19 1.31 Yes 0 0 No -30 0.53 No 39 65.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68916664 + NM_133509 RAD51B 0 . . . 3.61 76.96 16 5.56 Yes 30 0.77 No 0 0 No -24 0.61 No 49 52.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89641939 + NM_000314 PTEN 0 . . . 7.56 69.86 56 7.68 Yes 34 0.5 No 0 0 No -25 0.75 Yes 44 63.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190737812 + NM_000534 PMS1 0 . . . 0.46 66.89 16 4.78 No 9 1.17 Yes 0 0 No -20 0.85 Yes 44 67.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104165044 - NM_001100119 XRCC3 0 . . . 2.29 62.37 34 7.65 Yes 16 0.07 No 0 0 No -33 0.8 Yes 41 43.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215590999 - NM_000465 BARD1 0 . . . 3.09 75.29 28 5.19 No 26 1.34 Yes 0 0 No -27 0.9 Yes 29 43.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108233460 + NM_000051 ATM 0 . . . 7.84 83.03 39 5.51 No -4 0.73 No 0 0 No -32 0.71 Yes 46 48.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108144659 + NM_000051 ATM 0 . . . 6.35 66.81 16 3.87 No 53 -2.68 No 0 0 No -27 0.62 No 38 52.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21996307 - NM_000077 CDKN2A 0 . . . 3.74 69.76 12 5.1 No 31 0.65 No 0 0 No -30 0.21 No 41 50.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29120201 - NM_001005735 CHEK2 0 . . . 2.71 78.28 31 5.9 Yes 35 1.07 Yes 0 0 No -22 0.78 Yes 18 56.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21976497 - NM_000077 CDKN2A 0 . . . 6.2 82.31 14 4.9 No 58 1.57 Yes 0 0 No -20 0.5 No 43 80.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56799006 + NM_058216 RAD51C 0 . . . 0.5 79.83 16 3.38 No 64 1.1 Yes 0 0 No -21 0.66 No 44 71.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68606803 + NM_133509 RAD51B 0 . . . 7.11 90.31 48 7.27 Yes 21 1.68 Yes 0 0 No -33 0.44 No 45 88.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68412289 + NM_133509 RAD51B 0 . . . 3.87 66.46 23 4.65 No 52 0.77 No 0 0 No -22 0.73 Yes 40 70.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152354516 - NM_005431 XRCC2 0 . . . 0.05 74.68 28 6.48 Yes 44 0.62 No 0 0 No -27 0.9 Yes 47 53.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89630768 + NM_000314 PTEN 0 . . . 0.24 0 43 6.13 Yes 75 -1.84 No 0 0 No -27 0.89 Yes 12 63.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75518541 - NM_001040108 MLH3 0 . . . 7.98 72.2 22 4.97 No 66 1.05 Yes 0 0 No -21 0.57 No 48 59.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7576895 - NM_000546 TP53 0 . . . 5.58 82.01 30 5.39 No 52 1.23 Yes 0 0 No -25 0.38 No 49 46.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68681558 + NM_133509 RAD51B 0 . . . 4.47 70.43 25 5.2 No 14 0.73 No 0 0 No -20 0.54 No 44 72.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32941692 + NM_000059 BRCA2 0 . . . 3.35 73.65 19 5.56 Yes 52 1.16 Yes 0 0 No -23 0.68 Yes 54 81.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68665633 + NM_133509 RAD51B 0 . . . 4.43 70.12 40 6.4 Yes 25 0.39 No 0 0 No -19 0.38 No 41 68.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68462453 + NM_133509 RAD51B 0 . . . 4.71 84.22 28 5.29 No 33 0.91 Yes 0 0 No -60 0.76 Yes 50 90.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108232948 + NM_000051 ATM 0 . . . 2.03 74.97 32 6.28 Yes 74 -3.67 No 0 0 No -31 0.69 Yes 52 58.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89694315 + NM_000314 PTEN 0 . . . 0.54 64.07 19 4.93 No 24 0.66 No 0 0 No -18 0.5 No 34 94.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59846379 - NM_032043 BRIP1 0 . . . 0.43 0 23 5 No 46 0.73 No 0 0 No -22 0.89 Yes 47 78.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68791561 + NM_133509 RAD51B 0 . . . 5.94 76.34 13 5.99 Yes 2 1.91 Yes 0 0 No -23 0.46 No 26 68.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68512885 + NM_133509 RAD51B 0 . . . 3.89 84 21 4.21 No 2 1.5 Yes 0 0 No -55 0.45 No 16 73.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190672448 + NM_000534 PMS1 0 . . . 6.3 75.93 19 6.33 Yes 34 1.79 Yes 0 0 No -31 0.53 No 24 78.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94150041 - NM_005591 MRE11 0 . . . 4.13 71.26 30 6.83 Yes 25 1.59 Yes 0 0 No -29 0.88 Yes 33 86.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94176965 - NM_005591 MRE11 0 . . . 0.07 0 27 5.2 No 75 0.8 Yes 0 0 No -47 0.54 No 43 65.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68419647 + NM_133509 RAD51B 0 . . . 2.9 77.62 48 5.71 Yes 11 0.5 No 0 0 No -22 0.59 No 44 56.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190734228 + NM_000534 PMS1 0 . . . 6.26 73.95 24 4.79 No 28 0.67 No 0 0 No -23 0.75 Yes 35 68.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68819012 + NM_133509 RAD51B 0 . . . 3.9 81.54 22 4.79 No 3 1.21 Yes 0 0 No -21 0.88 Yes 46 74.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47746963 + NM_000251 MSH2 0 . . . 0.34 65.5 37 5.33 No -1 0.89 Yes 0 0 No -36 0.65 No 45 50.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89715840 + NM_000314 PTEN 0 . . . 2.48 0 18 4.03 No 15 0.6 No 0 0 No -25 0.43 No 39 68.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497732 + NM_133509 RAD51B 0 . . . 4.62 77.55 9 3.87 No 6 0.13 No 0 0 No -23 0.9 Yes 44 63.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69134049 + NM_133509 RAD51B 0 . . . 7.9 94.93 24 5.48 No 42 0.3 No 0 0 No -23 0.76 Yes 47 78.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68717961 + NM_133509 RAD51B 0 . . . 0.58 68.67 36 5.06 No 69 0.67 No 0 0 No -24 0.67 Yes 48 95.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29116067 - NM_001005735 CHEK2 0 . . . 4.74 82.44 48 7.23 Yes 0 0.33 No 0 0 No -38 0.45 No 38 76.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47650749 + NM_000251 MSH2 0 . . . 1.12 68.06 24 5.36 No 47 0.62 No 0 0 No -23 0.54 No 48 69.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69049144 + NM_133509 RAD51B 0 . . . 1.99 68.07 24 6.15 Yes -4 0.63 No 0 0 No -23 0.82 Yes 52 74.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89700400 + NM_000314 PTEN 0 . . . 0.15 72.89 18 4.9 No 68 1.46 Yes 0 0 No -17 0.75 Yes 31 75.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68414349 + NM_133509 RAD51B 0 . . . 0.65 72.75 29 5.66 Yes 42 0.37 No 0 0 No -28 0.58 No 50 34.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47694472 + NM_000251 MSH2 0 . . . 5.2 85.02 27 5.74 Yes 72 1.17 Yes 0 0 No -26 0.82 Yes 53 84.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40997244 + NM_001164269 RAD51 0 . . . 3.7 83.6 23 5.44 No 58 0.72 No 0 0 No -22 0.85 Yes 42 92.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68525595 + NM_133509 RAD51B 0 . . . 3.95 64.96 25 4.93 No -4 0.65 No 0 0 No -24 0.54 No 43 32.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47708526 + NM_000251 MSH2 0 . . . 1.84 66.22 17 6.93 Yes 33 0.08 No 0 0 No -29 0.5 No 35 74.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108180600 + NM_000051 ATM 0 . . . 2.36 74.18 49 3.54 No 16 -0.83 No 0 0 No -28 0.6 No 42 89.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56795459 + NM_058216 RAD51C 0 . . . 6.43 78.97 13 5.4 No 16 1.12 Yes 0 0 No -24 0.34 No 42 89.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68465072 + NM_133509 RAD51B 0 . . . 1.26 70.62 56 8.12 Yes -3 0.02 No 0 0 No -55 0.42 No 45 91.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68919231 + NM_133509 RAD51B 0 . . . 2.6 68.03 29 5.82 Yes 64 0.81 Yes 0 0 No -29 0.73 Yes 43 34.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47675915 + NM_000251 MSH2 0 . . . 0.89 0 22 4.69 No 63 -2.67 No 0 0 No -21 0.38 No 46 68.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69038460 + NM_133509 RAD51B 0 . . . 3.81 68.71 31 6.93 Yes 52 -2.81 No 0 0 No -30 0.47 No 40 83.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89712745 + NM_000314 PTEN 0 . . . 2.76 68.23 25 5.57 Yes 34 2.34 Yes 0 0 No -24 0.49 No 24 81.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152346320 - NM_005431 XRCC2 0 . . . 4.83 83.4 24 5.45 No 63 -4.31 No 0 0 No -23 0.52 No 49 42.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69101243 + NM_133509 RAD51B 0 . . . 6.62 91.4 19 6.48 Yes 43 0.68 No 0 0 No -29 0.7 Yes 48 80.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131951375 + NM_005732 RAD50 0 . . . 1.25 66.02 9 4.58 No 0 0.59 No 0 0 No -32 0.62 No 33 44.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32949907 + NM_000059 BRCA2 0 . . . 0.11 74.73 15 4.58 No 32 1.13 Yes 0 0 No -59 0.38 No 15 32.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68311869 + NM_133509 RAD51B 0 . . . 0.94 67.83 20 4.9 No 29 -3.92 No 0 0 No -19 0.85 Yes 36 86.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47773571 + NM_000251 MSH2 0 . . . 6.12 71.94 25 5.19 No 10 0.55 No 0 0 No -24 0.83 Yes 48 40.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47692786 + NM_000251 MSH2 0 . . . 5.99 86.47 46 6.84 Yes -1 0 No 0 0 No -30 0.75 Yes 46 46.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32919527 + NM_000059 BRCA2 0 . . . 0.04 70.65 19 4.74 No 4 0.52 No 0 0 No -18 0.81 Yes 45 40.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68845595 + NM_133509 RAD51B 0 . . . 6.93 85.16 20 7.21 Yes 18 0.72 No 0 0 No -19 0.58 No 40 89.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47746892 + NM_000251 MSH2 0 . . . 1.19 60.53 17 4.69 No 71 0.86 Yes 0 0 No -21 0.42 No 55 39.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108166403 + NM_000051 ATM 0 . . . 7.62 84.42 24 4.81 No 21 0.85 Yes 0 0 No -23 0.77 Yes 36 77.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89698484 + NM_000314 PTEN 0 . . . 6.53 84.76 29 5.92 Yes 70 -6.1 No 0 0 No -28 0.88 Yes 42 71.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23625176 - NM_024675 PALB2 0 . . . 9.91 78.55 18 5.29 No 59 0.58 No 0 0 No -36 0.24 No 44 83.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84386796 - NM_139076 FAM175A 0 . . . 0.32 69.7 16 4.47 No 47 0.87 Yes 0 0 No -15 0.44 No 48 36.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68459100 + NM_133509 RAD51B 0 . . . 5.71 76.55 15 5.39 No 23 0.34 No 0 0 No -24 0.4 No 40 47.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41252122 - NM_007294 BRCA1 0 . . . 0.97 71.28 13 3.82 No 31 1.52 Yes 0 0 No -17 0.39 No 27 83.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68640623 + NM_133509 RAD51B 0 . . . 2.25 72.39 31 6.08 Yes 28 -3.16 No 0 0 No -30 0.58 No 39 84.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69120261 + NM_133509 RAD51B 0 . . . 9.42 80.96 13 4.09 No 49 0.18 No 0 0 No -23 0.46 No 42 58.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47775810 + NM_000251 MSH2 0 . . . 4.88 73.93 24 4.62 No 52 1.89 Yes 0 0 No -23 0.45 No 37 58.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47782299 + NM_000251 MSH2 0 . . . 3.04 69.85 20 6.11 Yes 58 -5.85 No 0 0 No -32 0.74 Yes 14 36.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68493372 + NM_133509 RAD51B 0 . . . 4.03 68.05 29 5.92 Yes 45 1.58 Yes 0 0 No -28 0.94 Yes 13 90.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68878260 + NM_133509 RAD51B 0 . . . 1.23 72.34 34 7.41 Yes 17 -2.03 No 0 0 No -33 0.87 Yes 50 35.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32967826 + NM_000059 BRCA2 0 . . . 0.34 67.37 13 5.43 No 54 0.43 No 0 0 No -23 0.67 Yes 50 48.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68918445 + NM_133509 RAD51B 0 . . . 5.15 78.19 14 6.23 Yes 0 0.69 No 0 0 No -22 0.73 Yes 42 80.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108185987 + NM_000051 ATM 0 . . . 0.39 65.93 35 6.08 Yes 59 -5.82 No 0 0 No -34 0.74 Yes 48 35.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68797130 + NM_004360 CDH1 0 . . . 2.04 71.68 21 3.76 No 37 0.49 No 0 0 No -20 0.63 No 39 49.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89670930 + NM_000314 PTEN 0 . . . 4.91 67.76 38 6.81 Yes 42 1.04 Yes 0 0 No -29 0.28 No 48 25.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68291442 + NM_133509 RAD51B 0 . . . 6.39 80.36 18 6.48 Yes 11 0.03 No 0 0 No -28 0.63 No 38 78.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108112599 + NM_000051 ATM 0 . . . 3.12 66.92 28 5.61 Yes 9 0.85 Yes 0 0 No -22 0.36 No 44 82.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68372428 + NM_133509 RAD51B 0 . . . 3.79 79.15 39 3.9 No -4 1.04 Yes 0 0 No -22 0.32 No 50 62.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68513745 + NM_133509 RAD51B 0 . . . 1.76 80.78 39 6.14 Yes 35 1.76 Yes 0 0 No -28 0.62 No 49 81.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108157637 + NM_000051 ATM 0 . . . 2.88 78.31 16 3.88 No 25 0.99 Yes 0 0 No -16 0.45 No 40 89.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90992687 - NM_002485 NBN 0 . . . 0.66 71.48 33 5.45 No 21 -1.8 No 0 0 No -28 0.89 Yes 38 51.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56769307 + NM_058216 RAD51C 0 . . . 6.78 87.86 17 6 Yes 17 1.09 Yes 0 0 No -26 0.39 No 41 67.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190734108 + NM_000534 PMS1 0 . . . 4.89 94.04 9 5 No 60 1.12 Yes 0 0 No -55 0.56 No 51 37.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41217406 - NM_007294 BRCA1 0 . . . 0.26 63.49 66 8.7 Yes 47 0.81 Yes 0 0 No -23 0.86 Yes 48 43.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190678764 + NM_000534 PMS1 0 . . . 2.57 85.24 39 7.07 Yes 48 -2.1 No 0 0 No -38 0.89 Yes 38 76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68442216 + NM_133509 RAD51B 0 . . . 5.93 81.1 22 4.69 No 31 0.82 Yes 0 0 No -21 0.92 Yes 48 76.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47767289 + NM_000251 MSH2 0 . . . 3.5 0 17 4.79 No 15 0.92 Yes 0 0 No -37 0.5 No 43 49.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59934972 - NM_032043 BRIP1 0 . . . 0.78 0 22 4.73 No 55 1.56 Yes 0 0 No -21 0.93 Yes 13 51.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41016377 + NM_001164269 RAD51 0 . . . 3.13 73.14 22 5.29 No 28 0.79 Yes 0 0 No -29 0.6 No 30 81.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75494904 - NM_001040108 MLH3 0 . . . 4.65 77.08 57 7.39 Yes 46 0.11 No 0 0 No -42 0.51 No 50 49.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68425232 + NM_133509 RAD51B 0 . . . 0.17 68.81 27 5.18 No -3 0.18 No 0 0 No -26 0.83 Yes 33 29.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68322939 + NM_133509 RAD51B 0 . . . 2.75 67.72 15 5.38 No 71 1.19 Yes 0 0 No -22 0.48 No 23 78.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94151654 - NM_005591 MRE11 0 . . . 2.83 79.42 25 5.91 Yes -3 0.56 No 0 0 No -42 0.4 No 49 71.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152350307 - NM_005431 XRCC2 0 . . . 2.45 67.1 31 5.53 No 68 -2.94 No 0 0 No -30 0.61 No 43 30.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32908531 + NM_000059 BRCA2 0 . . . 0.19 62.98 30 6.9 Yes 24 0.33 No 0 0 No -29 0.41 No 30 49.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68902928 + NM_133509 RAD51B 0 . . . 3.38 63.17 18 6 Yes 12 0.25 No 0 0 No -17 0.48 No 46 62.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215612832 - NM_000465 BARD1 0 . . . 3.97 73.18 28 6.24 Yes 44 0.54 No 0 0 No -27 0.66 No 52 55.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68435229 + NM_133509 RAD51B 0 . . . 5.41 90.57 18 5.29 No 21 0.33 No 0 0 No -47 0.33 No 52 81.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47724913 + NM_000251 MSH2 0 . . . 6.21 82.31 13 4.36 No 58 1.15 Yes 0 0 No -31 0.74 Yes 54 73.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68777976 + NM_004360 CDH1 0 . . . 2.3 81.77 16 5.57 Yes -1 0.45 No 0 0 No -22 0.54 No 48 84.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89702305 + NM_000314 PTEN 0 . . . 3.7 82.85 21 4.41 No 36 0.31 No 0 0 No -20 0.87 Yes 53 58.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89660303 + NM_000314 PTEN 0 . . . 7.23 78.21 28 5.05 No 6 0.57 No 0 0 No -31 0.7 Yes 44 86.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68482309 + NM_133509 RAD51B 0 . . . 3.25 67.91 29 6.32 Yes 52 -2.38 No 0 0 No -28 0.49 No 43 18.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94226628 - NM_005591 MRE11 0 . . . 3.35 73.75 25 6.53 Yes 62 -3.11 No 0 0 No -24 0.41 No 39 56.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642104 - NM_000465 BARD1 0 . . . 0.31 0 44 6.78 Yes 9 0.57 No 0 0 No -43 0.52 No 45 57.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6035421 - NM_000535 PMS2 0 . . . 0.07 63.45 21 6.08 Yes -2 0.31 No 0 0 No -20 0.77 Yes 34 63.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152347404 - NM_005431 XRCC2 0 . . . 4.77 79.76 12 4.65 No 28 0.98 Yes 0 0 No -39 0.71 Yes 43 67.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47735509 + NM_000251 MSH2 0 . . . 6.25 84.16 27 5.26 No 58 -0.91 No 0 0 No -29 0.57 No 42 64.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47765661 + NM_000251 MSH2 0 . . . 1.12 77.18 20 4.69 No 63 -2.53 No 0 0 No -19 0.51 No 54 71.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69147832 + NM_133509 RAD51B 0 . . . 2.98 87.72 37 6.52 Yes 72 0.31 No 0 0 No -40 0.33 No 38 86.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75486012 - NM_001040108 MLH3 0 . . . 2.36 86.71 14 4.89 No 33 1.12 Yes 0 0 No -23 0.89 Yes 50 69.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68413247 + NM_133509 RAD51B 0 . . . 1.69 68.84 14 5.35 No 76 1.15 Yes 0 0 No -29 0.57 No 48 72.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68911029 + NM_133509 RAD51B 0 . . . 1.48 0 18 5.52 No 24 0.91 Yes 0 0 No -25 0.55 No 34 81.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68298442 + NM_133509 RAD51B 0 . . . 7.28 85.02 27 5.2 No 11 1.28 Yes 0 0 No -26 0.7 Yes 47 93.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56792685 + NM_058216 RAD51C 0 . . . 1.55 0 44 6.87 Yes 39 0.61 No 0 0 No -23 0.72 Yes 52 52.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68306591 + NM_133509 RAD51B 0 . . . 9.65 82.48 15 4.43 No 61 1.3 Yes 0 0 No -20 0.55 No 46 76.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90971685 - NM_002485 NBN 0 . . . 3.21 68.85 11 4.8 No 63 0.83 Yes 0 0 No -46 0.38 No 39 55.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108161692 + NM_000051 ATM 0 . . . 1.07 60.96 17 3.4 No 62 -6.28 No 0 0 No -21 0.4 No 40 73.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75487176 - NM_001040108 MLH3 0 . . . 6.49 78.69 18 4.69 No 55 1.15 Yes 0 0 No -17 0.78 Yes 41 57.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131902601 + NM_005732 RAD50 0 . . . 6.74 81.25 13 5.1 No 38 1.08 Yes 0 0 No -54 0.84 Yes 47 92.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68825748 + NM_133509 RAD51B 0 . . . 4.36 76.55 12 4.24 No 6 0.85 Yes 0 0 No -25 0.44 No 52 65.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41273556 - NM_007294 BRCA1 0 . . . 2.32 72.22 18 4.9 No 76 0.75 No 0 0 No -34 0.62 No 49 74.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59806784 - NM_032043 BRIP1 0 . . . 9.74 83.34 52 6.45 Yes 11 1.46 Yes 0 0 No -30 0.45 No 47 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69103453 + NM_133509 RAD51B 0 . . . 3.13 74.33 26 4.89 No 35 0.89 Yes 0 0 No -28 0.85 Yes 49 38.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89733205 + NM_000314 PTEN 0 . . . 5.12 71.51 27 4.2 No 14 2.09 Yes 0 0 No -53 0.62 No 17 79.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59812005 - NM_032043 BRIP1 0 . . . 10.66 82.46 24 4.74 No 14 1.29 Yes 0 0 No -27 0.64 No 44 86.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1206119 + NM_000455 STK11 0 . . . 3.38 67.76 18 4.8 No 21 -1.33 No 0 0 No -40 0.56 No 37 26.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94211566 - NM_005591 MRE11 0 . . . 3.72 79.73 9 5.2 No 30 1.73 Yes 0 0 No -26 0.86 Yes 51 56.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69116405 + NM_133509 RAD51B 0 . . . 3.86 75.47 16 4.69 No 20 0.1 No 0 0 No -27 0.54 No 49 61.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89665072 + NM_000314 PTEN 0 . . . 3.08 78.47 22 5.08 No 39 2.09 Yes 0 0 No -21 0.91 Yes 31 84.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94222021 - NM_005591 MRE11 0 . . . 3.68 85.36 25 5.19 No 71 -2.82 No 0 0 No -24 0.8 Yes 49 67.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41254930 - NM_007294 BRCA1 0 . . . 2.26 77.35 25 5.68 Yes 4 0.41 No 0 0 No -33 0.46 No 54 81.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68817563 + NM_004360 CDH1 0 . . . 7.21 89.47 9 5.29 No 9 1.05 Yes 0 0 No -18 0.53 No 49 81.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59827468 - NM_032043 BRIP1 0 . . . 3.22 79.36 37 4.38 No 5 0.6 No 0 0 No -24 0.47 No 48 38.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131953975 + NM_005732 RAD50 0 . . . 0.58 71.9 24 5.15 No 65 -3.44 No 0 0 No -23 0.65 No 43 48.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68882811 + NM_133509 RAD51B 0 . . . 0.83 75.81 25 5.84 Yes 76 0.98 Yes 0 0 No -30 0.55 No 50 44.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195965 + NM_000051 ATM 0 . . . 1.16 0 33 5.72 Yes 15 -2.68 No 0 0 No -32 0.48 No 26 58.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90971334 - NM_002485 NBN 0 . . . 10.12 92.52 16 4.66 No 38 0.69 No 0 0 No -18 0.39 No 52 64.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105190231 + NM_021930 RINT1 0 . . . 2.31 67.31 34 5.67 Yes 16 1.02 Yes 0 0 No -28 0.3 No 48 82.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68794202 + NM_004360 CDH1 0 . . . 3.72 77.08 41 4.34 No 22 1.49 Yes 0 0 No -21 0.51 No 36 94.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68808758 + NM_133509 RAD51B 0 . . . 9.07 82.05 28 4.93 No 3 1.07 Yes 0 0 No -22 0.64 No 49 58.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59898144 - NM_032043 BRIP1 0 . . . 2.24 80.12 71 6.03 Yes 7 1.16 Yes 0 0 No -22 0.34 No 51 83.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90993557 - NM_002485 NBN 0 . . . 0.31 0 16 4.63 No 63 -3.86 No 0 0 No -35 0.46 No 49 34.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68640018 + NM_133509 RAD51B 0 . . . 5.51 83.75 21 3.31 No 22 0.81 Yes 0 0 No -24 0.36 No 36 73.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131969479 + NM_005732 RAD50 0 . . . 1.77 81.83 21 4.35 No 34 0.9 Yes 0 0 No -27 0.5 No 24 86.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68950349 + NM_133509 RAD51B 0 . . . 5.06 80.06 17 6.08 Yes 66 0.71 No 0 0 No -16 0.68 Yes 44 58.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47682337 + NM_000251 MSH2 0 . . . 1.5 67.39 21 8.02 Yes 65 -4.92 No 0 0 No -20 0.62 No 46 82.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69003781 + NM_133509 RAD51B 0 . . . 0.98 76.63 21 4.63 No 70 -4.77 No 0 0 No -20 0.74 Yes 43 68.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59897570 - NM_032043 BRIP1 0 . . . 4.47 81.47 25 6.58 Yes 76 0.16 No 0 0 No -24 0.96 Yes 48 66.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108159370 + NM_000051 ATM 0 . . . 3.1 86.57 16 4.69 No 67 0.01 No 0 0 No -15 0.37 No 52 82.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68675295 + NM_133509 RAD51B 0 . . . 8.15 90.75 22 5.1 No 58 1.15 Yes 0 0 No -21 0.55 No 47 87.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190707660 + NM_000534 PMS1 0 . . . 2.27 69.4 47 6.69 Yes 17 0.95 Yes 0 0 No -27 0.56 No 32 77.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68814080 + NM_004360 CDH1 0 . . . 11.59 84.77 19 6.24 Yes 47 0.83 Yes 0 0 No -52 0.55 No 30 41.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40997517 + NM_001164269 RAD51 0 . . . 9.94 83.93 20 6.58 Yes 60 1.09 Yes 0 0 No -31 0.64 No 46 50.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68419110 + NM_133509 RAD51B 0 . . . 0.16 63.96 20 4.69 No 47 0.28 No 0 0 No -34 0.88 Yes 58 29.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59863469 - NM_032043 BRIP1 0 . . . 0.21 0 22 4.49 No 74 2.8 Yes 0 0 No -22 0.44 No 48 44.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90992893 - NM_002485 NBN 0 . . . 3.41 75.66 31 6.08 Yes 49 0.52 No 0 0 No -30 0.77 Yes 49 39.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56777032 + NM_058216 RAD51C 0 . . . 13.35 92.02 14 5.2 No 56 0.12 No 0 0 No -12 0.53 No 39 87.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69083454 + NM_133509 RAD51B 0 . . . 3.05 75.57 37 6.45 Yes 65 0.57 No 0 0 No -37 0.75 Yes 50 36.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69033700 + NM_133509 RAD51B 0 . . . 5.57 68.59 13 5.22 No 30 1 Yes 0 0 No -50 0.34 No 28 87.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108209647 + NM_000051 ATM 0 . . . 0.86 0 38 6.26 Yes 58 0.93 Yes 0 0 No -23 0.48 No 36 34.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48008609 + NM_000179 MSH6 0 . . . 4.78 81.65 10 4 No 25 -1.51 No 0 0 No -33 0.66 No 48 61.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047253 + NM_000249 MLH1 0 . . . 7.04 81.68 19 5 No 27 1.43 Yes 0 0 No -26 0.45 No 44 84.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68863083 + NM_133509 RAD51B 0 . . . 0.49 0 29 5.29 No 15 1.69 Yes 0 0 No -28 0.79 Yes 43 87.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68785478 + NM_133509 RAD51B 0 . . . 0.33 71.16 23 5.2 No 11 0.02 No 0 0 No -26 0.55 No 47 65.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105183584 + NM_021930 RINT1 0 . . . 4.29 77.89 32 5.55 No 5 1.43 Yes 0 0 No -34 0.51 No 45 64.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215637161 - NM_000465 BARD1 0 . . . 6.96 71.18 30 5.07 No 15 0.66 No 0 0 No -22 0.72 Yes 33 48.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41274961 - NM_007294 BRCA1 0 . . . 2.16 0 15 4.58 No 45 0.89 Yes 0 0 No -57 0.43 No 18 45.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108239429 + NM_000051 ATM 0 . . . 0.44 69.52 28 5.74 Yes 64 -5.06 No 0 0 No -27 0.74 Yes 46 82.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41262951 - NM_007294 BRCA1 0 . . . 2.24 80.12 29 5.29 No 7 1.16 Yes 0 0 No -22 0.67 Yes 44 68.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108108835 + NM_000051 ATM 0 . . . 3.6 85.02 17 4.47 No 4 1.05 Yes 0 0 No -16 0.59 No 54 69.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69081202 + NM_133509 RAD51B 0 . . . 0.63 66.09 16 6.27 Yes 62 0.4 No 0 0 No -26 0.87 Yes 40 77.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104175663 - NM_001100119 XRCC3 0 . . . 4.11 74.01 27 5.2 No 21 0.65 No 0 0 No -53 0.66 No 47 87.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89673568 + NM_000314 PTEN 0 . . . 3.7 78.98 44 6.86 Yes 53 0.53 No 0 0 No -43 0.69 Yes 30 71.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190707347 + NM_000534 PMS1 0 . . . 0.45 79.3 23 3.99 No 68 0.58 No 0 0 No -28 0.86 Yes 46 72.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68914059 + NM_133509 RAD51B 0 . . . 1.97 66.66 31 7.93 Yes 68 -3.64 No 0 0 No -30 0.9 Yes 40 55.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47662872 + NM_000251 MSH2 0 . . . 0.36 74.8 34 6 Yes 36 1.24 Yes 0 0 No -25 0.73 Yes 22 88.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90980054 - NM_002485 NBN 0 . . . 3.95 76.82 17 5.57 Yes 3 0.51 No 0 0 No -19 0.68 Yes 51 49.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68815955 + NM_004360 CDH1 0 . . . 1.19 69.94 20 4.53 No 43 -3.25 No 0 0 No -19 0.93 Yes 45 60.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68945422 + NM_133509 RAD51B 0 . . . 6.9 84.13 18 5.29 No 62 1.57 Yes 0 0 No -47 0.89 Yes 46 84.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68839826 + NM_004360 CDH1 0 . . . 0.01 0 15 5.57 Yes 68 -3.01 No 0 0 No -49 0.63 No 62 24.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90990130 - NM_002485 NBN 0 . . . 0.01 71.2 21 5.01 No 76 -6.15 No 0 0 No -20 0.62 No 48 79.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131971434 + NM_005732 RAD50 0 . . . 2.37 70.65 18 4.77 No 18 0.72 No 0 0 No -20 0.54 No 40 78.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68308631 + NM_133509 RAD51B 0 . . . 3.06 61.78 14 5.1 No 63 1.43 Yes 0 0 No -26 0.36 No 49 57.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94184711 - NM_005591 MRE11 0 . . . 0.16 59.8 30 5.57 Yes 74 0.89 Yes 0 0 No -29 0.74 Yes 38 64.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68864967 + NM_004360 CDH1 0 . . . 7.03 78.41 13 4.16 No 59 0.45 No 0 0 No -29 0.57 No 45 95.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108151395 + NM_000051 ATM 0 . . . 3.73 86.64 20 6.5 Yes 10 0.64 No 0 0 No -23 0.65 No 44 65.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32949691 + NM_000059 BRCA2 0 . . . 0.26 78.22 27 4.64 No 65 0.72 No 0 0 No -26 0.86 Yes 49 67.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68320630 + NM_133509 RAD51B 0 . . . 1.25 78.07 33 6.55 Yes 73 -3.64 No 0 0 No -32 0.63 No 44 36.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89633760 + NM_000314 PTEN 0 . . . 4.39 76.82 17 4.8 No 51 0.71 No 0 0 No -16 0.35 No 48 60.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47758698 + NM_000251 MSH2 0 . . . 2.96 70.49 23 5 No 76 -5.32 No 0 0 No -40 0.38 No 47 25.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47664075 + NM_000251 MSH2 0 . . . 6.67 80.78 27 5.05 No 53 -5.18 No 0 0 No -26 0.68 Yes 48 78.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108224319 + NM_000051 ATM 0 . . . 2.28 73.83 25 4.9 No 53 1 Yes 0 0 No -24 0.51 No 35 47.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190717735 + NM_000534 PMS1 0 . . . 7.48 81.65 31 5.26 No 75 0.76 No 0 0 No -26 0.89 Yes 41 57.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68730556 + NM_133509 RAD51B 0 . . . 1.42 73.4 17 4.8 No 48 1.48 Yes 0 0 No -24 0.7 Yes 50 89.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68496604 + NM_133509 RAD51B 0 . . . 2.04 80.34 27 6.3 Yes 10 0.74 No 0 0 No -26 0.66 No 48 75.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108146078 + NM_000051 ATM 0 . . . 1.77 64.21 26 3.63 No 47 1.59 Yes 0 0 No -20 0.66 No 41 56.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215600406 - NM_000465 BARD1 0 . . . 1.35 65.24 18 5.39 No 24 0 No 0 0 No -17 0.36 No 41 51.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68793977 + NM_133509 RAD51B 0 . . . 3.86 83.28 12 4.24 No 11 0.61 No 0 0 No -31 0.77 Yes 47 76.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190662256 + NM_000534 PMS1 0 . . . 5.17 80.09 20 4.86 No 54 0.71 No 0 0 No -24 0.76 Yes 36 54.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108142285 + NM_000051 ATM 0 . . . 7.06 86.51 20 5.06 No 50 1.4 Yes 0 0 No -19 0.8 Yes 45 57.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32917535 + NM_000059 BRCA2 0 . . . 4.79 81.18 14 5.47 No 57 0.9 Yes 0 0 No -28 0.92 Yes 49 80.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89695562 + NM_000314 PTEN 0 . . . 2.39 83.25 24 5.48 No 76 -2.43 No 0 0 No -23 0.75 Yes 41 54.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68509184 + NM_133509 RAD51B 0 . . . 3.09 75.49 21 6.08 Yes 68 0.14 No 0 0 No -20 0.55 No 43 54.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68943046 + NM_133509 RAD51B 0 . . . 0.31 0 27 5.43 No 49 0.99 Yes 0 0 No -26 0.61 No 36 85.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108169019 + NM_000051 ATM 0 . . . 8.75 88.6 25 4.9 No 60 0.83 Yes 0 0 No -59 0.5 No 43 94.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6039326 - NM_000535 PMS2 0 . . . 1.17 80.65 28 6.23 Yes 76 1.45 Yes 0 0 No -30 0.5 No 50 85.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69077267 + NM_133509 RAD51B 0 . . . 4.27 82.9 16 5.53 No 13 1.23 Yes 0 0 No -30 0.29 No 45 75.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108225706 + NM_000051 ATM 0 . . . 5.66 80.58 41 6.91 Yes 19 1.07 Yes 0 0 No -26 0.62 No 44 58.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68645962 + NM_133509 RAD51B 0 . . . 10.94 79.41 20 7.96 Yes 41 0.5 No 0 0 No -22 0.71 Yes 47 66.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69084118 + NM_133509 RAD51B 0 . . . 6.53 91.28 26 5.29 No 5 0.68 No 0 0 No -25 0.87 Yes 40 91.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94161659 - NM_005591 MRE11 0 . . . 0.31 67.26 25 6.06 Yes 75 1.04 Yes 0 0 No -24 0.6 No 25 60.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94214308 - NM_005591 MRE11 0 . . . 3.8 80.12 22 4.8 No 7 1.16 Yes 0 0 No -21 0.97 Yes 51 72.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59796478 - NM_032043 BRIP1 0 . . . 6.75 82.85 22 5.74 Yes 9 0.93 Yes 0 0 No -21 0.89 Yes 49 83.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68638202 + NM_133509 RAD51B 0 . . . 3.25 80.12 19 4.9 No 8 1.06 Yes 0 0 No -18 0.54 No 50 85.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68369611 + NM_133509 RAD51B 0 . . . 4.71 84.17 36 5.01 No 72 -1.6 No 0 0 No -35 0.59 No 22 64.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68588330 + NM_133509 RAD51B 0 . . . 5.39 71.63 28 6.24 Yes 15 1.03 Yes 0 0 No -27 0.94 Yes 46 73.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59828537 - NM_032043 BRIP1 0 . . . 2.61 70.7 23 4.78 No 12 0.36 No 0 0 No -22 0.93 Yes 46 88.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68494852 + NM_133509 RAD51B 0 . . . 3.57 71.41 22 5.99 Yes 72 0.92 Yes 0 0 No -21 0.82 Yes 53 61.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190708554 + NM_000534 PMS1 0 . . . 1.03 0 33 7.63 Yes 61 -3.94 No 0 0 No -32 0.76 Yes 38 23.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68475548 + NM_133509 RAD51B 0 . . . 3.86 68.07 54 7.38 Yes 0 1.87 Yes 0 0 No -53 0.56 No 45 83.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215611893 - NM_000465 BARD1 0 . . . 1.86 65.42 23 4.89 No 16 1.68 Yes 0 0 No -22 0.92 Yes 50 74.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69128417 + NM_133509 RAD51B 0 . . . 0.52 73.91 18 6.98 Yes 75 -5.51 No 0 0 No -23 0.63 No 43 79.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68357977 + NM_133509 RAD51B 0 . . . 1.38 68.48 24 4.59 No 67 -5.1 No 0 0 No -39 0.46 No 32 51.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47693870 + NM_000251 MSH2 0 . . . 2.11 68.16 33 5.66 Yes -3 0.76 No 0 0 No -32 0.36 No 45 63.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68440422 + NM_133509 RAD51B 0 . . . 1.26 70.94 20 5.66 Yes 59 0.97 Yes 0 0 No -19 0.78 Yes 39 70.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68414207 + NM_133509 RAD51B 0 . . . 0.56 67.42 46 5.28 No -1 1.15 Yes 0 0 No -23 0.31 No 39 92.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94162956 - NM_005591 MRE11 0 . . . 7.97 97.01 20 4.05 No 31 1.55 Yes 0 0 No -19 0.43 No 43 50.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84398327 - NM_139076 FAM175A 0 . . . 2.87 80.05 31 5.47 No 10 0.75 No 0 0 No -28 0.55 No 48 89.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108136941 + NM_000051 ATM 0 . . . 3.28 70.7 36 6.21 Yes 74 -3.12 No 0 0 No -24 0.38 No 48 55.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47655044 + NM_000251 MSH2 0 . . . 5.94 71.92 37 6.02 Yes 36 -1.49 No 0 0 No -36 0.69 Yes 37 51.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215609492 - NM_000465 BARD1 0 . . . 0.36 61.05 12 6.4 Yes 57 1.21 Yes 0 0 No -32 0.44 No 42 52.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69102695 + NM_133509 RAD51B 0 . . . 5.51 82.63 27 5.28 No 61 0.55 No 0 0 No -30 0.69 Yes 48 74.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215642819 - NM_000465 BARD1 0 . . . 3.11 86.87 26 5.38 No 33 0.98 Yes 0 0 No -26 0.65 No 50 52.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68822460 + NM_004360 CDH1 0 . . . 6.97 75.15 29 6.86 Yes -1 1.26 Yes 0 0 No -28 0.95 Yes 49 68.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23623330 - NM_024675 PALB2 0 . . . 0.09 0 17 4.8 No 19 0.5 No 0 0 No -19 0.79 Yes 44 34.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104178968 - NM_001100119 XRCC3 0 . . . 6.16 83.67 29 4.31 No 20 0.97 Yes 0 0 No -35 0.44 No 48 93.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68823337 + NM_133509 RAD51B 0 . . . 0.66 67.79 22 4.53 No 4 0.26 No 0 0 No -21 0.34 No 35 44.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32917620 + NM_000059 BRCA2 0 . . . 2.23 75.7 50 5.05 No 33 0.41 No 0 0 No -49 0.53 No 50 38.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84394323 - NM_139076 FAM175A 0 . . . 9.38 78.72 11 4.12 No 12 0.95 Yes 0 0 No -30 0.53 No 41 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68757709 + NM_133509 RAD51B 0 . . . 2.19 74.96 25 5.57 Yes 8 1.03 Yes 0 0 No -52 0.58 No 50 80.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68860987 + NM_133509 RAD51B 0 . . . 6.86 88.29 20 4.03 No 46 1.11 Yes 0 0 No -24 0.79 Yes 12 47.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215629460 - NM_000465 BARD1 0 . . . 0.8 0 15 5.54 No 45 2.15 Yes 0 0 No -28 0.31 No 31 65.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69012139 + NM_133509 RAD51B 0 . . . 2.92 0 16 3.88 No 16 1.58 Yes 0 0 No -20 0.52 No 42 83.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190725017 + NM_000534 PMS1 0 . . . 1.02 84.7 24 4.95 No 60 1.22 Yes 0 0 No -18 0.59 No 51 81.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40999715 + NM_001164269 RAD51 0 . . . 1.62 64.87 19 4.8 No 33 1.02 Yes 0 0 No -16 0.59 No 25 60.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131926289 + NM_005732 RAD50 0 . . . 2.68 61.43 26 5.45 No 16 0.27 No 0 0 No -26 0.59 No 36 73.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59914136 - NM_032043 BRIP1 0 . . . 7.24 76.91 34 7.74 Yes 70 0.79 Yes 0 0 No -33 0.45 No 46 98.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68457614 + NM_133509 RAD51B 0 . . . 1.32 70.44 38 5.48 No 9 0.36 No 0 0 No -28 0.65 No 25 63.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29132905 - NM_001005735 CHEK2 0 . . . 3.25 82.94 27 4.78 No 2 1.49 Yes 0 0 No -26 0.95 Yes 15 59.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68853465 + NM_133509 RAD51B 0 . . . 6.55 87.84 30 4.09 No 16 1.15 Yes 0 0 No -30 0.67 Yes 42 77.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56769155 + NM_058216 RAD51C 0 . . . 6.65 72.54 49 6.36 Yes 12 1.39 Yes 0 0 No -22 0.89 Yes 46 66.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68722483 + NM_133509 RAD51B 0 . . . 6.04 82.28 20 4.23 No 55 1.46 Yes 0 0 No -27 0.77 Yes 49 54.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21969499 - NM_000077 CDKN2A 0 . . . 3.14 70.38 54 6.86 Yes 40 0.7 No 0 0 No -22 0.74 Yes 18 82.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68819331 + NM_004360 CDH1 0 . . . 0.55 71.85 11 3.9 No -4 1.33 Yes 0 0 No -22 0.31 No 54 30.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69096308 + NM_133509 RAD51B 0 . . . 9.43 88 29 4.16 No 24 0.12 No 0 0 No -22 0.59 No 43 69.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68713886 + NM_133509 RAD51B 0 . . . 1.86 73.47 17 9.43 Yes -4 1.11 Yes 0 0 No -29 0.26 No 62 60.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94154889 - NM_005591 MRE11 0 . . . 9.65 81.47 31 5.42 No 9 1.45 Yes 0 0 No -20 0.51 No 53 83.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47656583 + NM_000251 MSH2 0 . . . 1.08 84.22 18 5.64 Yes 7 0.34 No 0 0 No -20 0.4 No 51 76.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59766984 - NM_032043 BRIP1 0 . . . 2.17 73.49 20 5.74 Yes 60 0.39 No 0 0 No -20 0.64 No 33 56.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68980651 + NM_133509 RAD51B 0 . . . 3.77 89.53 54 7.14 Yes 75 -2.29 No 0 0 No -36 0.64 No 51 54.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94200237 - NM_005591 MRE11 0 . . . 2.88 71.88 31 4.82 No 57 1.53 Yes 0 0 No -26 0.49 No 41 54.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23652551 - NM_024675 PALB2 0 . . . 4.33 82.77 21 5.04 No 40 0.06 No 0 0 No -20 0.67 Yes 26 51.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89693334 + NM_000314 PTEN 0 . . . 2.06 69.37 36 5.03 No 21 -3.27 No 0 0 No -24 0.7 Yes 44 78.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68849284 + NM_004360 CDH1 0 . . . 1.93 67.93 14 6.27 Yes 11 0.31 No 0 0 No -24 0.71 Yes 47 56.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68333247 + NM_133509 RAD51B 0 . . . 1.71 79.66 22 7.06 Yes 9 0.08 No 0 0 No -28 0.54 No 49 71.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89644178 + NM_000314 PTEN 0 . . . 3.76 69.99 24 5.1 No 23 0.78 Yes 0 0 No -23 0.8 Yes 26 65.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6011495 - NM_000535 PMS2 0 . . . 2.24 80.12 33 5.79 Yes 7 1.16 Yes 0 0 No -33 0.39 No 51 69.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68748288 + NM_133509 RAD51B 0 . . . 1.63 0 19 4.8 No 20 1.3 Yes 0 0 No -62 0.5 No 59 52.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90991720 - NM_002485 NBN 0 . . . 4.14 80.66 25 4.97 No 11 0.63 No 0 0 No -24 0.72 Yes 47 72.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94153824 - NM_005591 MRE11 0 . . . 0.06 74.97 21 4.79 No 60 0.91 Yes 0 0 No -20 0.55 No 51 50.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68854251 + NM_133509 RAD51B 0 . . . 5.66 84.53 42 5.37 No 31 0.95 Yes 0 0 No -24 0.54 No 27 46.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23615627 - NM_024675 PALB2 0 . . . 4.82 83.2 16 3.72 No 55 0.01 No 0 0 No -18 0.26 No 52 83.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131962996 + NM_005732 RAD50 0 . . . 2.75 61.4 31 5.81 Yes 46 1.13 Yes 0 0 No -34 0.42 No 16 53.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68380818 + NM_133509 RAD51B 0 . . . 1.88 86.31 25 5.57 Yes 33 1.24 Yes 0 0 No -24 0.56 No 25 52.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68865770 + NM_133509 RAD51B 0 . . . 0.28 73.18 28 5.46 No -4 0.78 Yes 0 0 No -27 0.89 Yes 49 93.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68822514 + NM_004360 CDH1 0 . . . 2.73 71.61 51 9.46 Yes 53 1.27 Yes 0 0 No -50 0.49 No 42 83.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68699185 + NM_133509 RAD51B 0 . . . 1.26 70.71 26 5.29 No 1 1.46 Yes 0 0 No -25 0.75 Yes 52 54.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68523047 + NM_133509 RAD51B 0 . . . 5.2 85.02 12 5.57 Yes 5 1.23 Yes 0 0 No -24 0.54 No 53 79.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68454414 + NM_133509 RAD51B 0 . . . 3.61 80.49 21 4.33 No 42 0.56 No 0 0 No -19 0.3 No 47 88.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21989367 - NM_000077 CDKN2A 0 . . . 0.74 60.12 26 5.88 Yes 72 1.46 Yes 0 0 No -26 0.49 No 30 76.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104161980 - NM_001100119 XRCC3 0 . . . 2.83 74.35 27 6.24 Yes 2 0.27 No 0 0 No -26 0.92 Yes 41 35.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89634463 + NM_000314 PTEN 0 . . . 4.08 79.73 20 5.1 No 68 1.03 Yes 0 0 No -49 0.44 No 55 37.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68492584 + NM_133509 RAD51B 0 . . . 7.03 81.46 46 7.14 Yes 59 0.92 Yes 0 0 No -24 0.46 No 32 59.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59760326 - NM_032043 BRIP1 0 . . . 1.76 80.12 31 6.84 Yes 69 0.72 No 0 0 No -30 0.94 Yes 46 75.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108218167 + NM_000051 ATM 0 . . . 3.54 72.67 18 4.9 No 30 -2.72 No 0 0 No -20 0.46 No 43 72.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47721353 + NM_000251 MSH2 0 . . . 5.41 79.67 34 6.28 Yes 59 0.78 Yes 0 0 No -29 0.44 No 40 57.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68960371 + NM_133509 RAD51B 0 . . . 5.46 74.57 26 5.38 No 1 0.3 No 0 0 No -22 0.63 No 51 33.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45794152 - NM_001048171 MUTYH 0 . . . 5.37 78.73 28 7.66 Yes 28 1.18 Yes 0 0 No -27 0.85 Yes 30 82.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59895596 - NM_032043 BRIP1 0 . . . 6.26 81.71 25 5.28 No 31 1.13 Yes 0 0 No -24 0.69 Yes 40 71.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215610094 - NM_000465 BARD1 0 . . . 2.65 66.38 22 5.1 No 43 0.61 No 0 0 No -21 0.74 Yes 28 40.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47667217 + NM_000251 MSH2 0 . . . 3.16 71.33 27 5.66 Yes 20 1.02 Yes 0 0 No -26 0.57 No 38 48.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68605202 + NM_133509 RAD51B 0 . . . 8.02 87.53 26 5.29 No 13 1.04 Yes 0 0 No -25 0.92 Yes 49 85.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47646579 + NM_000251 MSH2 0 . . . 2.07 71.8 21 6.46 Yes 3 0.58 No 0 0 No -20 0.6 No 51 48.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190676215 + NM_000534 PMS1 0 . . . 4.44 76.53 46 6.58 Yes 37 0.87 Yes 0 0 No -45 0.41 No 21 52.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68571256 + NM_133509 RAD51B 0 . . . 6.43 73.69 14 5.48 No 10 0.72 No 0 0 No -23 0.84 Yes 48 68.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190693552 + NM_000534 PMS1 0 . . . 1.24 75.14 20 7.14 Yes 69 -5.13 No 0 0 No -19 0.82 Yes 47 53.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59805529 - NM_032043 BRIP1 0 . . . 2.98 72.62 41 7.73 Yes 43 0.99 Yes 0 0 No -31 0.51 No 38 71.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59874773 - NM_032043 BRIP1 0 . . . 5.36 89.94 27 5.2 No 47 -2.76 No 0 0 No -47 0.64 No 51 49.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68777311 + NM_004360 CDH1 0 . . . 3.83 84 34 6.81 Yes 2 0.69 No 0 0 No -33 0.56 No 11 10.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799464 + NM_058216 RAD51C 0 . . . 0.65 68.62 18 4.9 No 43 0.66 No 0 0 No -42 0.83 Yes 54 27.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190648917 + NM_000534 PMS1 0 . . . 9.56 94.4 16 5.05 No 56 0.82 Yes 0 0 No -20 0.71 Yes 44 76.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89664865 + NM_000314 PTEN 0 . . . 5.42 77.45 27 6.05 Yes 11 1.17 Yes 0 0 No -26 0.8 Yes 47 81.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105203321 + NM_021930 RINT1 0 . . . 2.3 76.63 50 6.92 Yes 67 -4.21 No 0 0 No -28 0.67 Yes 47 41.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6018539 - NM_000535 PMS2 0 . . . 4.85 69.62 17 4.58 No 73 0.67 No 0 0 No -16 0.71 Yes 48 66.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69049967 + NM_133509 RAD51B 0 . . . 8.55 88.59 31 5.56 Yes 50 -3.17 No 0 0 No -22 0.45 No 46 71.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89721934 + NM_000314 PTEN 0 . . . 4.66 65.14 23 5.19 No 69 1.83 Yes 0 0 No -22 0.51 No 47 33.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68735945 + NM_133509 RAD51B 0 . . . 2.84 75.16 25 5.39 No 75 0.83 Yes 0 0 No -22 0.74 Yes 41 74.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108195778 + NM_000051 ATM 0 . . . 2.88 83.46 14 5.1 No 45 1 Yes 0 0 No -21 0.44 No 44 77.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215662478 - NM_000465 BARD1 0 . . . 0.26 63.12 29 5.34 No 47 1.21 Yes 0 0 No -26 0.85 Yes 39 64.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94164844 - NM_005591 MRE11 0 . . . 10.11 85.59 29 6.2 Yes 11 1.02 Yes 0 0 No -28 0.79 Yes 46 58.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32905815 + NM_000059 BRCA2 0 . . . 3.5 76.22 23 6.23 Yes 60 -5.61 No 0 0 No -22 0.72 Yes 48 48.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68895131 + NM_133509 RAD51B 0 . . . 5.24 77.87 15 4.88 No 48 0.46 No 0 0 No -26 0.45 No 41 66.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69106551 + NM_133509 RAD51B 0 . . . 5.33 91.22 24 5.57 Yes 14 0.01 No 0 0 No -28 0.85 Yes 44 53.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68499347 + NM_133509 RAD51B 0 . . . 5.9 80.74 15 5.66 Yes 27 1.12 Yes 0 0 No -30 0.53 No 42 68.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23626744 - NM_024675 PALB2 0 . . . 0.35 68.69 24 5.79 Yes 66 0.41 No 0 0 No -27 0.29 No 49 67.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69037288 + NM_133509 RAD51B 0 . . . 4.08 80.95 22 4.89 No 44 -2.81 No 0 0 No -21 0.92 Yes 18 42.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47707019 + NM_000251 MSH2 0 . . . 0.64 62.13 28 5.38 No 18 -3 No 0 0 No -27 0.66 No 47 40.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68353633 + NM_133509 RAD51B 0 . . . 3.44 74.07 43 6.73 Yes 27 -3.68 No 0 0 No -37 0.5 No 37 60.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190693025 + NM_000534 PMS1 0 . . . 4.04 78.15 13 5.47 No 10 0.46 No 0 0 No -27 0.63 No 48 65.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190707236 + NM_000534 PMS1 0 . . . 6.02 82.46 61 7.53 Yes 71 -5.2 No 0 0 No -60 0.5 No 47 55.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89623382 + NM_000314 PTEN 0 . . . 0.29 66.76 27 3.65 No 55 0.76 No 0 0 No -26 0.27 No 54 24.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68633737 + NM_133509 RAD51B 0 . . . 6.6 81.69 41 4.7 No 43 1.01 Yes 0 0 No -33 0.57 No 50 58.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215628643 - NM_000465 BARD1 0 . . . 0.1 0 28 5.17 No 55 0.14 No 0 0 No -25 0.41 No 18 46.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69118199 + NM_133509 RAD51B 0 . . . 4.57 69.91 29 7.35 Yes 67 0.88 Yes 0 0 No -28 0.91 Yes 35 48.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37091223 + NM_000249 MLH1 0 . . . 1.68 68.4 87 8.57 Yes 71 -6.13 No 0 0 No -28 0.06 No 53 67.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190670345 + NM_000534 PMS1 0 . . . 1.17 63.42 42 6.4 Yes 73 -6.41 No 22 0.8 Yes -34 0.74 Yes 29 45.15 No BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr14 69089533 + NM_133509 RAD51B 0 . . . 0.76 78.1 21 5.13 No 39 0.46 No 0 0 No -20 0.65 No 45 76.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90978640 - NM_002485 NBN 0 . . . 6.05 79.35 37 5.87 Yes -1 0.82 Yes 0 0 No -23 0.32 No 50 54.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89656114 + NM_000314 PTEN 0 . . . 1.91 66.14 28 5.41 No 49 0.01 No 0 0 No -27 0.89 Yes 33 92.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68691368 + NM_133509 RAD51B 0 . . . 2.79 81.34 20 7.12 Yes 2 1.18 Yes 0 0 No -19 0.57 No 44 89.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56791476 + NM_058216 RAD51C 0 . . . 2.26 0 36 6.49 Yes 45 1.11 Yes 0 0 No -21 0.33 No 49 84.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41207338 - NM_007294 BRCA1 0 . . . 0.33 0 38 5.06 No 59 -1.15 No 0 0 No -24 0.71 Yes 43 39.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32909453 + NM_000059 BRCA2 0 . . . 0.92 76.63 17 4.8 No 45 -3.5 No 0 0 No -42 0.46 No 48 77.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68358942 + NM_133509 RAD51B 0 . . . 10.11 89.5 21 4.97 No 38 1.42 Yes 0 0 No -20 0.77 Yes 47 83.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94186677 - NM_005591 MRE11 0 . . . 4.11 75.46 26 5.29 No 11 0.07 No 0 0 No -25 0.96 Yes 47 44.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47664398 + NM_000251 MSH2 0 . . . 1.58 0 24 5.03 No 22 0.59 No 0 0 No -23 0.95 Yes 36 30.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108155868 + NM_000051 ATM 0 . . . 3.42 81.43 14 5.46 No 4 1.04 Yes 0 0 No -13 0.65 No 54 62.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47674811 + NM_000251 MSH2 0 . . . 5.09 83.08 26 5.28 No 32 1 Yes 0 0 No -25 0.77 Yes 43 35.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21969857 - NM_000077 CDKN2A 0 . . . 0.07 66.06 23 5.39 No 40 1.21 Yes 0 0 No -18 0.4 No 47 19.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59894264 - NM_032043 BRIP1 0 . . . 2.37 72.96 20 5.57 Yes 39 1.13 Yes 0 0 No -19 0.74 Yes 42 73.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68834420 + NM_004360 CDH1 0 . . . 2.36 78.23 18 4.56 No 48 0.7 No 0 0 No -20 0.73 Yes 54 49.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59813364 - NM_032043 BRIP1 0 . . . 2.87 63.39 37 8.25 Yes 55 -2.22 No 0 0 No -36 0.88 Yes 43 60.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215652698 - NM_000465 BARD1 0 . . . 3.5 82.03 25 4.94 No 23 1.08 Yes 0 0 No -24 0.69 Yes 50 95.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68955514 + NM_133509 RAD51B 0 . . . 2.46 77.62 43 6.03 Yes 3 1.06 Yes 0 0 No -23 0.31 No 37 77.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32911145 + NM_000059 BRCA2 0 . . . 0.67 0 32 6.89 Yes 3 0.54 No 0 0 No -22 0.57 No 55 55.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47654470 + NM_000251 MSH2 0 . . . 0.06 54.36 41 6.47 Yes 73 -5.11 No 0 0 No -40 0.6 No 51 84.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89731791 + NM_000314 PTEN 0 . . . 5.57 74.32 39 5.98 Yes 21 0.32 No 0 0 No -27 0.73 Yes 37 88.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59764991 - NM_032043 BRIP1 0 . . . 7.81 82.84 52 8.55 Yes -3 0.6 No 0 0 No -25 0.87 Yes 43 94.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75491080 - NM_001040108 MLH3 0 . . . 3.85 77.51 14 5.38 No 20 1.1 Yes 0 0 No -28 0.53 No 42 47.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47637812 + NM_000251 MSH2 0 . . . 0.9 65.1 25 5.28 No 30 -3.37 No 0 0 No -24 0.82 Yes 31 47.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89721453 + NM_000314 PTEN 0 . . . 8.02 87.77 58 9.49 Yes 37 1.15 Yes 0 0 No -34 0.56 No 48 83.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68332795 + NM_133509 RAD51B 0 . . . 3.62 68.46 30 4.16 No 73 -5.78 No 0 0 No -29 0.88 Yes 51 43.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69030060 + NM_133509 RAD51B 0 . . . 1.37 0 22 4.8 No 75 -2.21 No 0 0 No -21 0.97 Yes 19 74.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59833554 - NM_032043 BRIP1 0 . . . 0.84 65.11 21 6 Yes 64 0.29 No 0 0 No -20 0.96 Yes 46 78.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59844684 - NM_032043 BRIP1 0 . . . 1.7 76.63 20 5.57 Yes 67 -5.66 No 0 0 No -24 0.65 No 50 56.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47761905 + NM_000251 MSH2 0 . . . 1.37 77.69 36 6.96 Yes 63 1.82 Yes 0 0 No -35 0.56 No 50 51.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215673562 - NM_000465 BARD1 0 . . . 4.9 78.36 26 4.81 No -2 0.86 Yes 0 0 No -20 0.55 No 48 81.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68727117 + NM_133509 RAD51B 0 . . . 0.6 72.08 23 4.54 No 5 1.74 Yes 0 0 No -22 0.45 No 37 75.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68431919 + NM_133509 RAD51B 0 . . . 6.36 77.36 37 4.23 No 48 1 Yes 0 0 No -26 0.66 No 33 42.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68783978 + NM_004360 CDH1 0 . . . 2.84 71.99 30 5.53 No 18 0.59 No 0 0 No -24 0.64 No 40 89.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68530762 + NM_133509 RAD51B 0 . . . 4.34 74.69 81 9.09 Yes 27 0.97 Yes 0 0 No -26 0.87 Yes 31 80.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94154574 - NM_005591 MRE11 0 . . . 1.17 79.52 17 4.8 No 76 -2.1 No 0 0 No -37 0.81 Yes 45 84.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21970366 - NM_000077 CDKN2A 0 . . . 5.6 72.32 50 7 Yes 9 2.03 Yes 0 0 No -27 0.38 No 44 81.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56793497 + NM_058216 RAD51C 0 . . . 1.78 80.58 22 7.28 Yes -3 0.37 No 0 0 No -21 0.9 Yes 61 19.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108170818 + NM_000051 ATM 0 . . . 2.46 71.04 23 5.57 Yes 45 0.27 No 0 0 No -34 0.42 No 49 53.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41014179 + NM_001164269 RAD51 0 . . . 3.64 66.74 20 7.08 Yes 2 0.18 No 0 0 No -19 0.61 No 44 62.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68747477 + NM_133509 RAD51B 0 . . . 1.37 74.45 18 4.58 No 69 -5.35 No 0 0 No -18 0.64 No 46 78.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90948584 - NM_002485 NBN 0 . . . 3.53 75.14 26 5.56 Yes 44 0.82 Yes 0 0 No -30 0.81 Yes 34 64.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108187212 + NM_000051 ATM 0 . . . 1.74 0 45 6.04 Yes 40 0.9 Yes 0 0 No -28 0.79 Yes 40 89.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190722028 + NM_000534 PMS1 0 . . . 1.46 74.4 11 4.88 No 68 0.6 No 0 0 No -39 0.63 No 51 41.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68683473 + NM_133509 RAD51B 0 . . . 3.31 79.97 38 5.49 No 2 0.39 No 0 0 No -19 0.6 No 49 71.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68858146 + NM_133509 RAD51B 0 . . . 3.73 76.73 19 4.36 No 52 -2.29 No 0 0 No -18 0.88 Yes 26 43.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68571017 + NM_133509 RAD51B 0 . . . 2.31 66.18 13 4.36 No 51 -3.64 No 0 0 No -33 0.39 No 48 21.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68668021 + NM_133509 RAD51B 0 . . . 3.72 81.54 44 7.29 Yes 62 0.29 No 0 0 No -24 0.35 No 53 46.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497407 + NM_133509 RAD51B 0 . . . 1.16 62.24 15 4.44 No 70 0.33 No 0 0 No -33 0.49 No 38 90.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29082372 - NM_001005735 CHEK2 0 . . . 3.19 81 38 5.97 Yes 25 -2.02 No 0 0 No -31 0.54 No 33 64.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48030213 + NM_000179 MSH6 0 . . . 2.03 66.02 23 4.71 No 47 0.71 No 0 0 No -22 0.62 No 48 77.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68537725 + NM_133509 RAD51B 0 . . . 7.53 70.01 15 5.19 No 46 1.19 Yes 0 0 No -25 0.71 Yes 45 60.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41013103 + NM_001164269 RAD51 0 . . . 4.35 81.9 20 4.58 No 74 -5.18 No 0 0 No -19 0.92 Yes 41 54.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89677713 + NM_000314 PTEN 0 . . . 9.77 80.86 20 4.9 No 64 1.16 Yes 0 0 No -19 0.92 Yes 40 57.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190735227 + NM_000534 PMS1 0 . . . 4.04 67.93 34 6.67 Yes 46 0.55 No 0 0 No -25 0.67 Yes 44 86.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68558952 + NM_133509 RAD51B 0 . . . 3.91 70.74 43 6.12 Yes 56 0.42 No 0 0 No -39 0.65 No 43 87.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69129905 + NM_133509 RAD51B 0 . . . 1.55 74.02 24 4.07 No 54 0.44 No 0 0 No -23 0.43 No 36 47.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48010384 + NM_000179 MSH6 0 . . . 4.49 74.79 29 7.35 Yes 45 -5.2 No 0 0 No -28 0.94 Yes 27 37.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47710652 + NM_000251 MSH2 0 . . . 4.55 66.51 34 7.01 Yes 68 1.12 Yes 0 0 No -33 0.84 Yes 40 73.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33424847 - NM_002878 RAD51D 0 . . . 1.74 0 15 5.28 No 20 2.02 Yes 0 0 No -28 0.37 No 38 92.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48020914 + NM_000179 MSH6 0 . . . 2.42 87.77 23 4.69 No 28 0.62 No 0 0 No -56 0.77 Yes 24 63.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68862834 + NM_004360 CDH1 0 . . . 3.46 70.31 23 5.29 No 33 -2.26 No 0 0 No -27 0.75 Yes 49 59.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94189890 - NM_005591 MRE11 0 . . . 7.53 79.61 24 4.52 No 69 -2.02 No 0 0 No -23 0.83 Yes 45 95.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94213031 - NM_005591 MRE11 0 . . . 4.28 66.89 22 5.65 Yes 57 0.48 No 0 0 No -22 0.62 No 45 60.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510331 - NM_001040108 MLH3 0 . . . 0.01 0 27 5.42 No 44 0.95 Yes 0 0 No -26 0.73 Yes 38 49.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215642348 - NM_000465 BARD1 0 . . . 2.92 68.51 17 5.29 No 75 -4.48 No 0 0 No -16 0.52 No 47 33.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90974712 - NM_002485 NBN 0 . . . 7.76 80.05 11 4.58 No 48 -2.54 No 0 0 No -17 0.46 No 50 68.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21978226 - NM_000077 CDKN2A 0 . . . 4.2 76.15 19 4.47 No 52 0.51 No 0 0 No -55 0.26 No 53 39.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32936892 + NM_000059 BRCA2 0 . . . 1.97 0 21 5.1 No 63 -3.79 No 0 0 No -19 0.54 No 49 56.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108112263 + NM_000051 ATM 0 . . . 1.1 0 19 6.61 Yes 25 0.61 No 0 0 No -18 0.7 Yes 57 40.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68901056 + NM_133509 RAD51B 0 . . . 7.43 82.27 35 5.89 Yes 8 0.4 No 0 0 No -34 0.61 No 50 94.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45807981 - NM_001048171 MUTYH 0 . . . 2.83 75.42 16 4.69 No 56 -2.73 No 0 0 No -20 0.37 No 38 63.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131936874 + NM_005732 RAD50 0 . . . 3.25 80.12 31 5.56 Yes 8 1.05 Yes 0 0 No -23 0.81 Yes 50 55.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105181334 + NM_021930 RINT1 0 . . . 2.97 0 15 4.58 No 65 0.75 No 0 0 No -22 0.74 Yes 39 49.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59889478 - NM_032043 BRIP1 0 . . . 2.48 75.8 12 4.9 No 4 0.59 No 0 0 No -23 0.71 Yes 46 65.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69134555 + NM_133509 RAD51B 0 . . . 1.8 0 28 5.38 No 66 0.22 No 0 0 No -22 0.64 No 18 65.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68635567 + NM_133509 RAD51B 0 . . . 7.57 80.72 14 5.15 No 17 1.16 Yes 0 0 No -23 0.46 No 41 50.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131918549 + NM_005732 RAD50 0 . . . 2.02 65.1 91 10.94 Yes 65 0.61 No 0 0 No -29 0.6 No 49 69.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68768045 + NM_133509 RAD51B 0 . . . 4.04 83.1 26 5.29 No 4 0.1 No 0 0 No -25 0.89 Yes 48 78.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41197689 - NM_007294 BRCA1 0 . . . 0.51 75.84 33 5.91 Yes 24 -1.35 No 0 0 No -32 0.81 Yes 50 35.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68554035 + NM_133509 RAD51B 0 . . . 1.52 63.07 23 5.29 No 73 1.11 Yes 0 0 No -23 0.67 Yes 44 72.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59880081 - NM_032043 BRIP1 0 . . . 2.76 74.37 23 4.9 No 12 1.19 Yes 0 0 No -22 0.44 No 46 93.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68819486 + NM_133509 RAD51B 0 . . . 0.48 64.32 16 3.82 No 76 0.26 No 0 0 No -21 0.43 No 46 49.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48025369 + NM_000179 MSH6 0 . . . 2.76 67.93 26 5.14 No 45 0.8 Yes 0 0 No -25 0.73 Yes 34 45.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59846249 - NM_032043 BRIP1 0 . . . 6.51 86.3 11 3.92 No 66 0.45 No 0 0 No -20 0.46 No 47 65.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68721251 + NM_133509 RAD51B 0 . . . 2.42 0 16 5.3 No 11 0.69 No 0 0 No -24 0.55 No 47 88.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68396272 + NM_133509 RAD51B 0 . . . 6.21 87.07 22 4.58 No 48 0.29 No 0 0 No -21 0.66 No 46 38.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131903807 + NM_005732 RAD50 0 . . . 5.57 90.14 75 7.38 Yes 2 1.57 Yes 0 0 No -29 0.49 No 19 60.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32907927 + NM_000059 BRCA2 0 . . . 8.03 80.48 29 5.17 No 76 0.23 No 0 0 No -26 0.64 No 21 74.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59893676 - NM_032043 BRIP1 0 . . . 2.19 79.1 30 5.57 Yes 71 -6.31 No 0 0 No -24 0.53 No 25 42.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90964216 - NM_002485 NBN 0 . . . 7.13 79.92 26 6.05 Yes 9 0.87 Yes 0 0 No -24 0.53 No 45 65.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190721265 + NM_000534 PMS1 0 . . . 0.22 57.31 35 5.16 No 45 0.41 No 0 0 No -27 0.76 Yes 39 40.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84385121 - NM_139076 FAM175A 0 . . . 0.08 0 19 5.12 No 59 0.31 No 0 0 No -18 0.58 No 43 22.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68284937 + NM_133509 RAD51B 0 . . . 1.12 75.18 16 5.38 No 33 1.03 Yes 0 0 No -22 0.84 Yes 25 35.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56805168 + NM_058216 RAD51C 0 . . . 1.91 66.11 32 5.45 No 26 -2.69 No 0 0 No -24 0.46 No 42 65.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29099149 - NM_001005735 CHEK2 0 . . . 3.02 75.08 19 5 No 53 1.17 Yes 0 0 No -32 0.25 No 39 44.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108183577 + NM_000051 ATM 0 . . . 7.98 83.06 19 4.9 No 57 0.38 No 0 0 No -18 0.39 No 40 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59905083 - NM_032043 BRIP1 0 . . . 4.1 0 14 4.47 No 73 0.8 Yes 0 0 No -47 0.53 No 44 74.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68981379 + NM_133509 RAD51B 0 . . . 5.99 92.31 32 5.99 Yes 56 0.54 No 0 0 No -31 0.57 No 51 66.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52445759 - NM_004656 BAP1 0 . . . 0.1 59.34 13 4.78 No 30 0.6 No 0 0 No -40 0.33 No 45 26.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41227448 - NM_007294 BRCA1 0 . . . 0.48 60.35 19 4.53 No 36 0.82 Yes 0 0 No -18 0.49 No 39 59.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68495127 + NM_133509 RAD51B 0 . . . 8.29 86.77 35 6 Yes -3 0.76 No 0 0 No -27 0.39 No 46 72.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41198395 - NM_007294 BRCA1 0 . . . 0.99 72.67 18 4.84 No 71 -5.48 No 0 0 No -34 0.64 No 52 34.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68615296 + NM_133509 RAD51B 0 . . . 0.59 56.22 35 4.55 No 23 1.11 Yes 0 0 No -30 0.47 No 39 89.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68676283 + NM_133509 RAD51B 0 . . . 3.79 62.63 22 4.9 No 76 0.83 Yes 0 0 No -21 0.69 Yes 23 57.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59821830 - NM_032043 BRIP1 0 . . . 5.84 79.61 14 5 No 70 -5.85 No 0 0 No -13 0.4 No 48 36.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68862230 + NM_004360 CDH1 0 . . . 0.07 56.77 32 6.16 Yes 67 0.08 No 0 0 No -29 0.57 No 42 40.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41017360 + NM_001164269 RAD51 0 . . . 2.89 68.34 12 4.8 No 21 1.7 Yes 0 0 No -20 0.33 No 42 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68854092 + NM_133509 RAD51B 0 . . . 5.21 84.43 23 4.69 No 76 0.63 No 0 0 No -22 0.8 Yes 45 64.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89725414 + NM_000314 PTEN 0 . . . 4.43 81.33 15 4.22 No 41 1.82 Yes 0 0 No -25 0.68 Yes 17 62.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68466508 + NM_133509 RAD51B 0 . . . 4.43 80.41 15 5.06 No 7 0.4 No 0 0 No -26 0.62 No 46 51.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52445279 - NM_004656 BAP1 0 . . . 1.67 73.69 24 5.48 No 67 2.12 Yes 0 0 No -23 0.62 No 46 43.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68806366 + NM_004360 CDH1 0 . . . 3.63 89.45 15 5.74 Yes 11 0.78 Yes 0 0 No -54 0.5 No 47 87.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59850648 - NM_032043 BRIP1 0 . . . 4.2 80.94 39 4.04 No 26 0.07 No 0 0 No -21 0.49 No 32 76.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108107022 + NM_000051 ATM 0 . . . 0.57 67.3 20 4.58 No 4 0.41 No 0 0 No -19 0.84 Yes 54 65.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108166878 + NM_000051 ATM 0 . . . 1.27 0 27 9.83 Yes -1 0.46 No 0 0 No -22 0.79 Yes 45 40.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94195692 - NM_005591 MRE11 0 . . . 2.74 81.42 12 5.65 Yes 74 0.91 Yes 0 0 No -22 0.53 No 50 82.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68775740 + NM_133509 RAD51B 0 . . . 3.5 78.35 21 4.97 No 10 0.73 No 0 0 No -20 0.54 No 48 82.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68542935 + NM_133509 RAD51B 0 . . . 7.78 84.76 36 6.08 Yes 16 1.45 Yes 0 0 No -23 0.34 No 42 95.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68285441 + NM_133509 RAD51B 0 . . . 4.3 76.73 22 5.74 Yes 44 -2.58 No 0 0 No -21 0.83 Yes 47 46.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68551100 + NM_133509 RAD51B 0 . . . 4.13 72.44 36 6.48 Yes 68 0.28 No 0 0 No -35 0.76 Yes 52 49.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108234887 + NM_000051 ATM 0 . . . 0.91 72.49 25 5.1 No 51 -1.56 No 0 0 No -21 0.4 No 35 32.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68667124 + NM_133509 RAD51B 0 . . . 3.8 79.67 82 11.19 Yes 66 1.17 Yes 0 0 No -43 0.38 No 40 55.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41249995 - NM_007294 BRCA1 0 . . . 6.98 80.5 20 6.75 Yes 7 0.32 No 0 0 No -26 0.79 Yes 51 58.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104172621 - NM_001100119 XRCC3 0 . . . 5.08 81.35 22 5.29 No 29 -1.62 No 0 0 No -28 0.3 No 23 21.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68793075 + NM_133509 RAD51B 0 . . . 2.15 80.3 13 5.78 Yes 68 0.8 Yes 0 0 No -34 0.37 No 42 57.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105205682 + NM_021930 RINT1 0 . . . 0.32 56.32 20 4.43 No 15 -3.17 No 35 0.47 Yes -19 0.75 Yes 37 50.33 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 69002431 + NM_133509 RAD51B 0 . . . 5.32 85.67 14 5.56 Yes 42 -4.44 No 0 0 No -24 0.43 No 48 57.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215626401 - NM_000465 BARD1 0 . . . 5.83 75.33 21 5.12 No 72 1.23 Yes 0 0 No -24 0.7 Yes 34 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59755186 - NM_032043 BRIP1 0 . . . 7.96 84.36 38 5.3 No 5 1.21 Yes 0 0 No -37 0.74 Yes 46 60.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1224276 + NM_000455 STK11 0 . . . 5.52 77.51 27 6.1 Yes NA NA NA 0 0 No -27 0.66 Yes 50 80.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68780054 + NM_004360 CDH1 0 . . . 0.45 0 38 5.28 No 14 0.62 No 0 0 No -23 0.6 No 31 70.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29120601 - NM_001005735 CHEK2 0 . . . 4.15 72.85 20 5.57 Yes 58 -3.88 No 0 0 No -19 0.69 Yes 47 40.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68643947 + NM_133509 RAD51B 0 . . . 2.47 60.03 17 5.6 Yes 14 1.09 Yes 0 0 No -16 0.55 No 40 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68442996 + NM_133509 RAD51B 0 . . . 0.11 68.17 31 4.19 No 52 0.52 No 0 0 No -23 0.34 No 46 30.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215611389 - NM_000465 BARD1 0 . . . 0.49 0 36 6.48 Yes 14 0.06 No 0 0 No -22 0.59 No 46 78.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23636898 - NM_024675 PALB2 0 . . . 4.93 82.31 31 5.7 Yes 60 1.23 Yes 0 0 No -30 0.46 No 55 48.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215641659 - NM_000465 BARD1 0 . . . 5.48 75.79 16 5.18 No 0 1.39 Yes 0 0 No -31 0.46 No 50 60.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75486774 - NM_001040108 MLH3 0 . . . 6.22 76.57 19 4.68 No 16 1.04 Yes 0 0 No -40 0.28 No 42 50.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68908984 + NM_133509 RAD51B 0 . . . 12.55 89.05 20 5.1 No 23 0.88 Yes 0 0 No -19 0.31 No 51 70.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59765779 - NM_032043 BRIP1 0 . . . 0.94 0 16 4.72 No 38 1.47 Yes 0 0 No -20 0.76 Yes 53 45.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41011631 + NM_001164269 RAD51 0 . . . 8.32 93.21 12 4.12 No 46 -3.85 No 0 0 No -30 0.94 Yes 50 38.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105189233 + NM_021930 RINT1 0 . . . 3.87 73.91 46 7.1 Yes 25 0.53 No 0 0 No -26 0.24 No 44 64.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68821059 + NM_133509 RAD51B 0 . . . 3.21 0 9 5.19 No 40 1.16 Yes 0 0 No -20 0.48 No 18 54.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47744012 + NM_000251 MSH2 0 . . . 1.66 55.98 20 5.1 No 35 -3.13 No 0 0 No -28 0.56 No 45 65.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68966649 + NM_133509 RAD51B 0 . . . 6.61 89.5 19 5.74 Yes 5 1.33 Yes 0 0 No -46 0.39 No 53 60.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33435776 - NM_002878 RAD51D 0 . . . 0.51 61.64 49 5.51 No 45 0.62 No 0 0 No -48 0.72 Yes 44 18.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108209672 + NM_000051 ATM 0 . . . 0.39 0 20 4.97 No 9 0.14 No 0 0 No -30 0.71 Yes 43 56.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69042258 + NM_133509 RAD51B 0 . . . 2.29 76.64 22 4.8 No -4 0.18 No 0 0 No -21 0.96 Yes 41 28.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90986770 - NM_002485 NBN 0 . . . 5.72 81.59 26 5.66 Yes 14 1.25 Yes 0 0 No -25 0.93 Yes 44 94.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68820176 + NM_004360 CDH1 0 . . . 2.83 65.88 26 5.48 No 16 1.12 Yes 0 0 No -25 0.86 Yes 42 94.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68538624 + NM_133509 RAD51B 0 . . . 4.32 75.61 29 5.63 Yes 44 -2.02 No 0 0 No -20 0.59 No 49 59.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190724702 + NM_000534 PMS1 0 . . . 2.13 71.41 40 6.68 Yes -3 0.32 No 0 0 No -39 0.54 No 38 78.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7576234 - NM_000546 TP53 0 . . . 0.42 74.73 33 6.82 Yes 49 1.4 Yes 0 0 No -32 0.56 No 23 47.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59837157 - NM_032043 BRIP1 0 . . . 5.98 81.38 23 4.9 No 8 1.37 Yes 0 0 No -22 0.88 Yes 50 91.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6045315 - NM_000535 PMS2 0 . . . 6.3 77.49 27 5.7 Yes 20 1.04 Yes 0 0 No -26 0.75 Yes 38 76.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68548116 + NM_133509 RAD51B 0 . . . 1.01 0 15 4.58 No 69 0.47 No 0 0 No -38 0.37 No 46 62.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190688204 + NM_000534 PMS1 0 . . . 2.64 64.87 17 3.99 No 61 2.02 Yes 0 0 No -36 0.36 No 47 83.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68941834 + NM_133509 RAD51B 0 . . . 5.11 76.3 12 3.99 No 66 0.26 No 0 0 No -28 0.72 Yes 53 31.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68836716 + NM_133509 RAD51B 0 . . . 0.83 76.27 28 5.35 No 70 -1.67 No 0 0 No -18 0.61 No 50 61.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75489542 - NM_001040108 MLH3 0 . . . 0.95 70.58 16 4.69 No 59 1.19 Yes 0 0 No -29 0.22 No 46 31.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6047013 - NM_000535 PMS2 0 . . . 2.99 70.2 38 6.7 Yes 57 0.22 No 0 0 No -29 0.5 No 63 30.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68736897 + NM_133509 RAD51B 0 . . . 3.79 72.48 39 5.44 No 44 0.95 Yes 0 0 No -38 0.5 No 44 54.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131979516 + NM_005732 RAD50 0 . . . 2.27 80.78 17 4.36 No 10 1.19 Yes 0 0 No -16 0.93 Yes 48 79.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68494181 + NM_133509 RAD51B 0 . . . 10.26 95.43 26 5.28 No 10 1.43 Yes 0 0 No -28 0.64 No 48 93.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69113577 + NM_133509 RAD51B 0 . . . 0.82 67.2 28 5.66 Yes 54 1.17 Yes 0 0 No -25 0.6 No 45 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68858110 + NM_004360 CDH1 0 . . . 5.32 78.38 27 7.29 Yes 32 1 Yes 0 0 No -27 0.43 No 42 68.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59888998 - NM_032043 BRIP1 0 . . . 0.72 60.09 43 7.48 Yes 6 -2.42 No 0 0 No -42 0.79 Yes 40 42.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47664135 + NM_000251 MSH2 0 . . . 0.57 69.47 32 5.92 Yes 75 -6.25 No 0 0 No -31 0.71 Yes 51 91.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69024947 + NM_133509 RAD51B 0 . . . 0.43 62.13 37 5.16 No 20 0.33 No 0 0 No -37 0.36 No 38 77.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1217409 + NM_000455 STK11 0 . . . 3.55 79.24 13 4.9 No 33 1.17 Yes 0 0 No -23 0.38 No 25 58.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108158628 + NM_000051 ATM 0 . . . 5.09 0 24 5.98 Yes 20 0.99 Yes 0 0 No -23 0.44 No 38 74.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68506536 + NM_133509 RAD51B 0 . . . 5.37 75.84 14 3.76 No 4 1.38 Yes 0 0 No -59 0.46 No 30 47.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68371754 + NM_133509 RAD51B 0 . . . 5.89 77.97 40 5.62 Yes 38 0.74 No 0 0 No -25 0.79 Yes 45 80.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94193454 - NM_005591 MRE11 0 . . . 1.8 62.83 34 4.45 No 46 0.65 No 0 0 No -18 0.6 No 48 65.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47779793 + NM_000251 MSH2 0 . . . 1.51 77.18 17 7.06 Yes 53 0.63 No 0 0 No -23 0.74 Yes 37 62.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190735635 + NM_000534 PMS1 0 . . . 8.01 81.49 80 6.58 Yes 34 1.02 Yes 0 0 No -33 0.26 No 47 60.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68374111 + NM_133509 RAD51B 0 . . . 2.1 62.6 24 4.9 No 50 0.56 No 0 0 No -20 0.43 No 48 64.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68437235 + NM_133509 RAD51B 0 . . . 3.17 0 16 5.16 No 20 1.5 Yes 0 0 No -20 0.53 No 38 96.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68316253 + NM_133509 RAD51B 0 . . . 1.97 80.65 56 11.16 Yes 27 0.95 Yes 0 0 No -33 0.7 Yes 50 79.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68619009 + NM_133509 RAD51B 0 . . . 3.92 77.7 18 4.68 No 28 1.05 Yes 0 0 No -49 0.33 No 30 69.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69101051 + NM_133509 RAD51B 0 . . . 4.15 75.32 45 7.16 Yes 3 0.78 Yes 0 0 No -30 0.47 No 49 56.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68578979 + NM_133509 RAD51B 0 . . . 7.34 92.98 27 5.16 No 41 0.73 No 0 0 No -26 0.51 No 49 69.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68412777 + NM_133509 RAD51B 0 . . . 7.27 74.91 25 5.39 No 42 0.87 Yes 0 0 No -24 0.73 Yes 40 71.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152351804 - NM_005431 XRCC2 0 . . . 5.96 85.67 15 5.57 Yes 10 1.35 Yes 0 0 No -47 0.45 No 48 89.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68696457 + NM_133509 RAD51B 0 . . . 4.28 71.37 22 5.28 No 7 1.04 Yes 0 0 No -21 0.7 Yes 47 84.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190721918 + NM_000534 PMS1 0 . . . 2.17 72.87 24 6.41 Yes 24 0 No 0 0 No -23 0.74 Yes 34 35.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59846553 - NM_032043 BRIP1 0 . . . 0.09 0 44 5.6 Yes 54 0.83 Yes 0 0 No -29 0.88 Yes 39 95.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90963176 - NM_002485 NBN 0 . . . 2.18 69.64 18 5.85 Yes 56 0.27 No 0 0 No -21 0.54 No 46 70.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69105710 + NM_133509 RAD51B 0 . . . 3.83 84.23 23 4.9 No 4 0.57 No 0 0 No -22 0.83 Yes 54 57.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29086453 - NM_001005735 CHEK2 0 . . . 5.79 85.02 82 8.24 Yes 3 0.24 No 0 0 No -46 0.1 No 44 66.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68864343 + NM_133509 RAD51B 0 . . . 7.45 78.21 18 4.9 No 19 0.12 No 0 0 No -22 0.62 No 36 74.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68541552 + NM_133509 RAD51B 0 . . . 0.81 66.57 17 4.8 No 63 1 Yes 0 0 No -21 0.64 No 29 67.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68943677 + NM_133509 RAD51B 0 . . . 2.77 66.14 22 4.61 No 55 0.89 Yes 0 0 No -19 0.48 No 56 42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7583974 - NM_000546 TP53 0 . . . 0.59 74.68 23 4.84 No 61 0.75 No 0 0 No -22 0.58 No 46 58.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45802511 - NM_001048171 MUTYH 0 . . . 9.01 86.08 45 6.55 Yes 4 0.79 Yes 0 0 No -34 0.35 No 51 81.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37042196 + NM_000249 MLH1 0 . . . 1.24 76.63 13 4.12 No 10 0.44 No 0 0 No -28 0.85 Yes 48 79.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68876201 + NM_133509 RAD51B 0 . . . 5.34 72.6 64 7.05 Yes 65 1.28 Yes 0 0 No -34 0.54 No 35 38.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48009176 + NM_000179 MSH6 0 . . . 5.86 83.47 26 5.28 No -2 -1.58 No 0 0 No -30 0.8 Yes 46 46.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190723894 + NM_000534 PMS1 0 . . . 1.34 75.34 40 7.28 Yes 42 0.8 Yes 0 0 No -39 0.82 Yes 36 75.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69138230 + NM_133509 RAD51B 0 . . . 3.41 67.88 35 7.65 Yes 21 1.28 Yes 0 0 No -33 0.43 No 37 94.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6026260 - NM_000535 PMS2 0 . . . 5.69 81.57 37 6.16 Yes 59 -0.99 No 0 0 No -33 0.34 No 44 75.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190694896 + NM_000534 PMS1 0 . . . 3.51 77.15 23 3.8 No 4 0.6 No 0 0 No -23 0.43 No 44 84.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32956499 + NM_000059 BRCA2 0 . . . 2.07 80.35 16 6.32 Yes 9 0.65 No 0 0 No -23 0.49 No 49 92.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41195578 - NM_007294 BRCA1 0 . . . 4.59 76.27 23 4.74 No 28 1.04 Yes 0 0 No -26 0.31 No 30 77.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32917661 + NM_000059 BRCA2 0 . . . 4.81 73.31 26 5.11 No 74 0.41 No 0 0 No -26 0.87 Yes 37 76.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47655225 + NM_000251 MSH2 0 . . . 0.09 74.68 28 5.38 No 55 0.58 No 0 0 No -27 0.81 Yes 54 68.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94212113 - NM_005591 MRE11 0 . . . 4.43 89.17 76 6.77 Yes 31 1.03 Yes 0 0 No -33 0.3 No 50 60.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108108889 + NM_000051 ATM 0 . . . 6.4 84.82 15 5.48 No 58 1.02 Yes 0 0 No -20 0.4 No 34 42.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68646311 + NM_133509 RAD51B 0 . . . 3 0 31 5.74 Yes 66 0.82 Yes 0 0 No -30 0.66 Yes 44 50.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32921612 + NM_000059 BRCA2 0 . . . 2.63 75.52 26 5.17 No 2 0.07 No 0 0 No -25 0.85 Yes 51 61.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69009506 + NM_133509 RAD51B 0 . . . 0.21 0 25 5.8 Yes 37 1.41 Yes 0 0 No -24 0.94 Yes 21 93.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7588089 - NM_000546 TP53 0 . . . 8.36 93.32 18 4.69 No 20 1.7 Yes 0 0 No -40 0.87 Yes 38 86.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68643664 + NM_133509 RAD51B 0 . . . 4.58 83.54 36 6.22 Yes 49 -2.42 No 0 0 No -35 0.66 No 45 55.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59923430 - NM_032043 BRIP1 0 . . . 0.72 62.03 28 4.55 No 20 0.87 Yes 0 0 No -27 0.85 Yes 38 90.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68784912 + NM_133509 RAD51B 0 . . . 2.75 75.97 44 6.5 Yes 43 -1.16 No 0 0 No -44 0.37 No 48 87.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29089702 - NM_001005735 CHEK2 0 . . . 2.57 72.07 27 5.72 Yes 47 0.71 No 0 0 No -29 0.65 No 48 65.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59836342 - NM_032043 BRIP1 0 . . . 6.49 84.17 13 4.36 No 57 0.9 Yes 0 0 No -20 0.25 No 43 69.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69066617 + NM_133509 RAD51B 0 . . . 6.2 88.31 28 5.37 No 69 0.59 No 0 0 No -55 0.28 No 17 71.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89689518 + NM_000314 PTEN 0 . . . 2.24 72.44 25 4.9 No 29 0.34 No 0 0 No -45 0.44 No 48 43.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68969640 + NM_133509 RAD51B 0 . . . 1.2 78.07 25 4.92 No 52 -4.61 No 0 0 No -24 0.3 No 49 67.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94220808 - NM_005591 MRE11 0 . . . 1.77 66.3 21 4.8 No 61 -5.08 No 0 0 No -20 0.82 Yes 44 88.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41235037 - NM_007294 BRCA1 0 . . . 2.76 66.54 15 4.58 No 59 1.16 Yes 0 0 No -37 0.52 No 45 61.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68832529 + NM_004360 CDH1 0 . . . 9.04 97.68 38 6.24 Yes -2 0.05 No 0 0 No -32 0.76 Yes 46 50.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94197237 - NM_005591 MRE11 0 . . . 6.11 78.63 28 5.66 Yes 27 0.23 No 0 0 No -27 0.81 Yes 45 76.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37044864 + NM_000249 MLH1 0 . . . 3.97 84.41 28 5.83 Yes 69 1.32 Yes 0 0 No -27 0.76 Yes 43 61.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68356324 + NM_133509 RAD51B 0 . . . 5.79 69.42 25 4.68 No 20 0.86 Yes 0 0 No -24 0.85 Yes 38 92.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75511787 - NM_001040108 MLH3 0 . . . 2.3 68.34 21 4.75 No 23 1.56 Yes 0 0 No -24 0.73 Yes 45 66.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68706604 + NM_133509 RAD51B 0 . . . 0.66 59.27 12 4.69 No 58 1.21 Yes 0 0 No -17 0.19 No 42 64.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215638145 - NM_000465 BARD1 0 . . . 4.95 72.11 30 5.74 Yes 63 0.56 No 0 0 No -29 0.91 Yes 48 84.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152363991 - NM_005431 XRCC2 0 . . . 5.95 74.15 11 5.39 No 15 0.23 No 0 0 No -30 0.54 No 40 72.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47750269 + NM_000251 MSH2 0 . . . 3.94 65.65 33 5.71 Yes 35 0.79 Yes 0 0 No -32 0.77 Yes 40 69.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75512856 - NM_001040108 MLH3 0 . . . 4.71 84.17 34 5.89 Yes 59 -1.1 No 0 0 No -28 0.67 Yes 16 77.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41207776 - NM_007294 BRCA1 0 . . . 4.19 76.77 22 4.9 No 2 1.3 Yes 0 0 No -21 0.77 Yes 44 83.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68661638 + NM_133509 RAD51B 0 . . . 2.86 77.03 11 4.9 No -4 0.83 Yes 0 0 No -20 0.57 No 42 76.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84385902 - NM_139076 FAM175A 0 . . . 3.28 0 15 5.52 No 47 -1.79 No 0 0 No -28 0.48 No 53 75.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68855452 + NM_133509 RAD51B 0 . . . 2.29 87.24 33 5.93 Yes 68 1.23 Yes 0 0 No -32 0.6 No 49 97.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68967728 + NM_133509 RAD51B 0 . . . 7.07 83.09 13 5.08 No 17 1.45 Yes 0 0 No -26 0.25 No 41 93.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59891738 - NM_032043 BRIP1 0 . . . 6.48 80.99 20 4.77 No 62 0.77 No 0 0 No -22 0.89 Yes 46 95.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131938382 + NM_005732 RAD50 0 . . . 5.04 78.53 11 4.12 No 37 1.31 Yes 0 0 No -23 0.3 No 42 89.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90952048 - NM_002485 NBN 0 . . . 5.2 73.4 27 5.66 Yes -3 0.73 No 0 0 No -26 0.86 Yes 44 55.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37060213 + NM_000249 MLH1 0 . . . 0.78 84.22 47 7.21 Yes 33 0.5 No 0 0 No -18 0.6 No 50 28.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69137566 + NM_133509 RAD51B 0 . . . 6.54 80.87 25 5.1 No 50 -1.17 No 0 0 No -24 0.72 Yes 41 51.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59937854 - NM_032043 BRIP1 0 . . . 1.15 73.96 16 4.69 No 74 1.1 Yes 0 0 No -48 0.43 No 51 84.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40997218 + NM_001164269 RAD51 0 . . . 4.61 88.55 21 6.68 Yes 32 0.72 No 0 0 No -20 0.79 Yes 44 61.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68801878 + NM_004360 CDH1 0 . . . 4.13 84.41 26 5.57 Yes 6 0.69 No 0 0 No -25 0.88 Yes 38 44.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215638720 - NM_000465 BARD1 0 . . . 0.28 73.54 30 6.32 Yes 39 -2.67 No 0 0 No -29 0.3 No 46 59.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68308358 + NM_133509 RAD51B 0 . . . 2.1 61.26 18 4.47 No 44 0.27 No 0 0 No -43 0.47 No 50 60.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896596 - NM_032043 BRIP1 0 . . . 4.49 75.65 24 4.38 No 44 1.48 Yes 0 0 No -23 0.72 Yes 40 82.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190649496 + NM_000534 PMS1 0 . . . 3.8 89.44 33 9.19 Yes 62 0.22 No 0 0 No -33 0.75 Yes 52 35.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94152178 - NM_005591 MRE11 0 . . . 1.95 68.67 18 5.33 No 39 1.05 Yes 0 0 No -17 0.54 No 49 32.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52438154 - NM_004656 BAP1 0 . . . 1.06 76.85 33 5.76 Yes 66 -5.85 No 0 0 No -32 0.56 No 63 30.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41264087 - NM_007294 BRCA1 0 . . . 1.93 66.61 20 5.48 No 76 -2.58 No 0 0 No -19 0.53 No 49 48.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68949610 + NM_133509 RAD51B 0 . . . 7.68 75.58 24 5.1 No 40 -2.23 No 0 0 No -20 0.67 Yes 40 84.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6011153 - NM_000535 PMS2 0 . . . 4.94 72.35 12 5.66 Yes 64 -5.31 No 0 0 No -25 0.64 No 50 62.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68307202 + NM_133509 RAD51B 0 . . . 3.29 71.92 36 6.17 Yes 14 0.13 No 0 0 No -35 0.88 Yes 41 56.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108201953 + NM_000051 ATM 0 . . . 2.29 0 21 5.74 Yes 67 0.49 No 0 0 No -20 0.59 No 53 46.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108113010 + NM_000051 ATM 0 . . . 0.45 64.81 23 5.04 No 65 -2.76 No 0 0 No -22 0.56 No 49 78.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68298055 + NM_133509 RAD51B 0 . . . 0.44 67.36 21 5.18 No 70 -5.28 No 0 0 No -24 0.71 Yes 50 32.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68781120 + NM_133509 RAD51B 0 . . . 5.4 78.64 24 7.27 Yes 3 0.92 Yes 0 0 No -23 0.88 Yes 48 49.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68811079 + NM_004360 CDH1 0 . . . 1.89 0 20 3.1 No 1 0.46 No 0 0 No -19 0.52 No 43 66.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68782762 + NM_004360 CDH1 0 . . . 2.55 83.95 14 4.47 No 28 0.4 No 0 0 No -18 0.79 Yes 40 46.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84395992 - NM_139076 FAM175A 0 . . . 0.33 0 23 4.79 No 61 -3.74 No 0 0 No -22 0.95 Yes 57 35.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105175861 + NM_021930 RINT1 0 . . . 2.24 80.12 57 10.34 Yes 7 1.02 Yes 0 0 No -50 0.72 Yes 51 82.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21970064 - NM_000077 CDKN2A 0 . . . 3.56 55.03 20 4.47 No 32 0.51 No 0 0 No -19 0.93 Yes 17 44.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215606594 - NM_000465 BARD1 0 . . . 1.46 80.01 20 4.73 No 76 -5.94 No 0 0 No -19 0.45 No 46 78.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69134021 + NM_133509 RAD51B 0 . . . 2.86 84.83 55 5.13 No 62 0.95 Yes 0 0 No -23 0.64 No 50 94.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68896027 + NM_133509 RAD51B 0 . . . 0.75 0 34 7.23 Yes 66 -6 No 0 0 No -22 0.76 Yes 49 28.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131928981 + NM_005732 RAD50 0 . . . 3.38 71.41 20 5.09 No 6 1.5 Yes 0 0 No -22 0.71 Yes 46 46.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68562379 + NM_133509 RAD51B 0 . . . 4.24 73.48 23 6.48 Yes 11 0.07 No 0 0 No -22 0.79 Yes 47 57.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59917127 - NM_032043 BRIP1 0 . . . 5.14 74.18 21 4.87 No 15 -3.08 No 0 0 No -24 0.62 No 43 71.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41023911 + NM_001164269 RAD51 0 . . . 4.75 65.16 23 4.56 No 39 0.8 Yes 0 0 No -40 0.45 No 44 73.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29085135 - NM_001005735 CHEK2 0 . . . 1.35 0 22 5 No 69 0.49 No 0 0 No -21 0.51 No 51 27.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68620175 + NM_133509 RAD51B 0 . . . 4.35 76.26 20 3.28 No 8 0.99 Yes 0 0 No -20 0.32 No 50 59.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75502363 - NM_001040108 MLH3 0 . . . 5.47 79.32 34 7.93 Yes 45 0.53 No 0 0 No -33 0.48 No 45 61.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274152 - NM_007294 BRCA1 0 . . . 8.89 89.42 46 5.95 Yes 72 0.52 No 0 0 No -39 0.52 No 45 80.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190739711 + NM_000534 PMS1 0 . . . 5.65 87.8 16 4.69 No 4 1.72 Yes 0 0 No -26 0.45 No 39 66.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32915602 + NM_000059 BRCA2 0 . . . 2.45 70.31 16 5.51 No 5 0.23 No 0 0 No -29 0.48 No 45 73.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68379425 + NM_133509 RAD51B 0 . . . 5.12 72.32 18 3.52 No 15 0.41 No 0 0 No -35 0.57 No 40 74.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190695708 + NM_000534 PMS1 0 . . . 1.4 79.5 18 4.9 No 43 -2.27 No 0 0 No -38 0.74 Yes 49 35.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108107835 + NM_000051 ATM 0 . . . 0.83 73.12 24 5.26 No 72 0.35 No 0 0 No -27 0.46 No 45 38.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32909615 + NM_000059 BRCA2 0 . . . 1.83 0 26 6.74 Yes 12 0.64 No 0 0 No -25 0.73 Yes 46 91.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68955143 + NM_133509 RAD51B 0 . . . 8.38 84.43 10 5.39 No 6 1.25 Yes 0 0 No -22 0.54 No 52 63.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33433668 - NM_002878 RAD51D 0 . . . 0.26 0 55 9.65 Yes 33 1.19 Yes 0 0 No -43 0.52 No 25 96.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45794500 - NM_001048171 MUTYH 0 . . . 1.18 0 14 4.58 No 22 1.52 Yes 0 0 No -22 0.86 Yes 36 89.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68558548 + NM_133509 RAD51B 0 . . . 6.96 86.96 28 5.29 No 32 0.23 No 0 0 No -27 0.48 No 51 68.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190696389 + NM_000534 PMS1 0 . . . 1.32 77.96 26 3.23 No 15 1.6 Yes 0 0 No -24 0.82 Yes 43 86.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69144842 + NM_133509 RAD51B 0 . . . 0.08 69.64 27 5.53 No -1 0.03 No 0 0 No -26 0.55 No 47 93.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37063654 + NM_000249 MLH1 0 . . . 4.56 68.02 30 5.83 Yes 44 -2.15 No 0 0 No -27 0.64 No 43 82.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108214307 + NM_000051 ATM 0 . . . 4 78.24 26 4.59 No 53 -5.16 No 0 0 No -23 0.42 No 48 70.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68529051 + NM_133509 RAD51B 0 . . . 9.04 89.31 20 5.25 No 59 1.34 Yes 0 0 No -25 0.59 No 40 67.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90953522 - NM_002485 NBN 0 . . . 2.58 77.75 13 5 No 7 1 Yes 0 0 No -20 0.34 No 51 67.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37076983 + NM_000249 MLH1 0 . . . 2.8 74.4 13 4.83 No 71 0.89 Yes 0 0 No -21 0.33 No 48 47.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68788586 + NM_133509 RAD51B 0 . . . 4.87 83.33 31 5.56 Yes 33 1.11 Yes 0 0 No -24 0.74 Yes 44 54.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68527669 + NM_133509 RAD51B 0 . . . 5.84 86.48 35 6.61 Yes 71 -2.07 No 0 0 No -29 0.73 Yes 18 62.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75512622 - NM_001040108 MLH3 0 . . . 0.22 76.14 14 5.33 No 27 0.78 Yes 0 0 No -32 0.87 Yes 31 74.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32956352 + NM_000059 BRCA2 0 . . . 2.95 70.85 29 6.76 Yes 21 1.71 Yes 0 0 No -28 0.88 Yes 37 75.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94209674 - NM_005591 MRE11 0 . . . 6.59 79.68 31 6.99 Yes 66 -2.75 No 0 0 No -34 0.67 Yes 40 58.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68553290 + NM_133509 RAD51B 0 . . . 4.66 77.22 28 4.9 No 20 0.57 No 0 0 No -23 0.79 Yes 35 85.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68967353 + NM_133509 RAD51B 0 . . . 3.04 74.48 19 4.88 No 61 -4.81 No 0 0 No -23 0.61 No 40 34.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68808915 + NM_004360 CDH1 0 . . . 2.89 74.55 26 5.29 No 64 -4.93 No 0 0 No -25 0.9 Yes 41 60.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59770437 - NM_032043 BRIP1 0 . . . 2.03 73.84 54 7.54 Yes 22 1.26 Yes 0 0 No -35 0.54 No 49 71.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68681450 + NM_133509 RAD51B 0 . . . 2.16 75.84 33 5.88 Yes 49 0.6 No 0 0 No -33 0.58 No 44 60.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108117515 + NM_000051 ATM 0 . . . 0.63 61.89 30 7.07 Yes 47 -5.38 No 0 0 No -29 0.79 Yes 43 37.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68510626 + NM_133509 RAD51B 0 . . . 7.16 86.48 36 7.85 Yes 76 -3.92 No 0 0 No -35 0.43 No 47 78.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108151108 + NM_000051 ATM 0 . . . 3.32 78.5 19 5.29 No 64 1.08 Yes 0 0 No -22 0.77 Yes 45 75.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6020482 - NM_000535 PMS2 0 . . . 4.99 90.1 19 4.53 No 53 0.88 Yes 0 0 No -22 0.37 No 44 55.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921396 + NM_133509 RAD51B 0 . . . 2.97 0 36 5.91 Yes 5 0.62 No 0 0 No -31 0.3 No 53 75.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69142398 + NM_133509 RAD51B 0 . . . 0.6 66.57 34 7.59 Yes 21 0.64 No 0 0 No -28 0.74 Yes 37 63.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68449372 + NM_133509 RAD51B 0 . . . 3.73 62.44 10 4 No 22 0.65 No 0 0 No -22 0.44 No 36 61.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90995953 - NM_002485 NBN 0 . . . 3.08 80.3 19 5.57 Yes 26 1.68 Yes 0 0 No -24 0.82 Yes 52 42.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47702940 + NM_000251 MSH2 0 . . . 0.63 70.16 32 5.57 Yes 57 -4.67 No 0 0 No -24 0.55 No 40 29.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68617235 + NM_133509 RAD51B 0 . . . 10.04 86.85 22 5.27 No 25 0.44 No 0 0 No -46 0.27 No 42 82.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68804607 + NM_133509 RAD51B 0 . . . 0.55 80.65 50 7.18 Yes 76 1.34 Yes 0 0 No -52 0.56 No 50 85.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68631544 + NM_133509 RAD51B 0 . . . 1.98 85.3 15 4.5 No -1 0.23 No 0 0 No -17 0.43 No 46 45.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68961936 + NM_133509 RAD51B 0 . . . 1 72.53 34 5.32 No 40 1.18 Yes 0 0 No -27 0.58 No 18 71.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59919689 - NM_032043 BRIP1 0 . . . 0.79 0 47 5.61 Yes 57 1.34 Yes 0 0 No -25 0.37 No 40 94.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32974693 + NM_000059 BRCA2 0 . . . 8.31 81.46 18 6.8 Yes 41 1.33 Yes 0 0 No -17 0.52 No 44 76.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68494383 + NM_133509 RAD51B 0 . . . 3.13 70.85 40 6.19 Yes 46 0.57 No 0 0 No -39 0.64 No 34 58.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29099266 - NM_001005735 CHEK2 0 . . . 3.66 73.54 31 4.92 No 64 -5.85 No 0 0 No -30 0.71 Yes 58 36.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6038322 - NM_000535 PMS2 0 . . . 2.82 82.57 31 3.93 No 76 1.08 Yes 0 0 No -26 0.6 No 42 69.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40997052 + NM_001164269 RAD51 0 . . . 2.24 80.12 23 5.67 Yes 7 1.16 Yes 0 0 No -28 0.56 No 51 83.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190722576 + NM_000534 PMS1 0 . . . 5.87 78.08 32 6.16 Yes 60 -4.84 No 0 0 No -31 0.66 No 51 81.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131921026 + NM_005732 RAD50 0 . . . 4.78 72.57 35 5.71 Yes 0 1.11 Yes 0 0 No -34 0.48 No 42 69.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32948193 + NM_000059 BRCA2 0 . . . 0.88 71.29 24 4.9 No 65 1.1 Yes 0 0 No -23 0.68 Yes 50 60.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68896568 + NM_133509 RAD51B 0 . . . 4.18 70.73 12 3.87 No 21 1.2 Yes 0 0 No -29 0.75 Yes 37 92.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68775599 + NM_133509 RAD51B 0 . . . 0.25 70.1 31 5.92 Yes 32 1.01 Yes 0 0 No -30 0.74 Yes 44 80.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68909686 + NM_133509 RAD51B 0 . . . 2.24 65.22 24 5.9 Yes 22 1.24 Yes 0 0 No -23 0.67 Yes 36 88.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68829382 + NM_133509 RAD51B 0 . . . 2.7 80.61 27 5.27 No 68 -3.96 No 0 0 No -26 0.48 No 53 39.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68332438 + NM_133509 RAD51B 0 . . . 3.6 85.02 16 4.34 No 4 1.05 Yes 0 0 No -45 0.79 Yes 54 67.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7587343 - NM_000546 TP53 0 . . . 4.08 74.12 61 5.89 Yes 76 0.65 No 0 0 No -23 0.54 No 50 59.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190689141 + NM_000534 PMS1 0 . . . 4.85 80.69 17 6.93 Yes 31 0.35 No 0 0 No -27 0.41 No 41 58.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89711319 + NM_000314 PTEN 0 . . . 0.08 67.18 31 5.22 No 64 1.26 Yes 0 0 No -34 0.63 No 44 65.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69098484 + NM_133509 RAD51B 0 . . . 3.82 69.47 24 5.1 No 59 -0.29 No 0 0 No -26 0.61 No 36 62.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131929777 + NM_005732 RAD50 0 . . . 2.26 68.01 46 6.35 Yes 75 -6.17 No 0 0 No -32 0.79 Yes 49 71.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68801142 + NM_004360 CDH1 0 . . . 2.66 81.48 23 4.76 No 40 0.95 Yes 0 0 No -32 0.66 No 18 75.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105205123 + NM_021930 RINT1 0 . . . 2.73 60.19 33 6 Yes 25 0.03 No 0 0 No -32 0.8 Yes 43 60.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56790726 + NM_058216 RAD51C 0 . . . 2.69 0 16 4.98 No 76 1.15 Yes 0 0 No -19 0.46 No 31 63.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21985817 - NM_000077 CDKN2A 0 . . . 4.95 74.54 35 6.57 Yes 60 1.17 Yes 0 0 No -30 0.66 Yes 49 49.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56797493 + NM_058216 RAD51C 0 . . . 2.98 76.77 26 6.25 Yes -3 0.08 No 0 0 No -25 0.73 Yes 47 78.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108099655 + NM_000051 ATM 0 . . . 2.95 56.77 28 3.71 No 43 -3.74 No 0 0 No -23 0.46 No 49 39.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68645078 + NM_133509 RAD51B 0 . . . 7.36 84.62 20 5.9 Yes 36 0.24 No 0 0 No -20 0.71 Yes 43 66.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68421293 + NM_133509 RAD51B 0 . . . 0.35 70.35 21 5.66 Yes 0 0.68 No 0 0 No -20 0.78 Yes 49 42.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69108489 + NM_133509 RAD51B 0 . . . 1.29 70.16 20 4.12 No 29 -3.84 No 0 0 No -19 0.45 No 47 41.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47632057 + NM_000251 MSH2 0 . . . 0.42 74.73 21 4.58 No 33 1.02 Yes 0 0 No -20 0.85 Yes 25 46.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68732725 + NM_133509 RAD51B 0 . . . 4.21 71.27 58 7.24 Yes 75 -5.99 No 0 0 No -51 0.26 No 48 70.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94155495 - NM_005591 MRE11 0 . . . 0.36 56.57 14 4.8 No 54 -1.92 No 0 0 No -18 0.4 No 21 80.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68812125 + NM_133509 RAD51B 0 . . . 1.39 56.21 22 3.98 No 65 -6.17 No 0 0 No -21 0.58 No 57 68.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59925904 - NM_032043 BRIP1 0 . . . 0.91 68.18 37 5.93 Yes 68 -3.02 No 0 0 No -26 0.78 Yes 51 49.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94168069 - NM_005591 MRE11 0 . . . 3.84 79.95 35 7.55 Yes 25 0.75 No 0 0 No -32 0.52 No 45 63.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68689573 + NM_133509 RAD51B 0 . . . 1.25 0 25 7.79 Yes 14 1.6 Yes 0 0 No -24 0.26 No 44 80.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68716938 + NM_133509 RAD51B 0 . . . 9.3 83.72 24 6 Yes 14 1.03 Yes 0 0 No -23 0.63 No 44 40.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1207619 + NM_000455 STK11 0 . . . 6.83 86.04 30 7 Yes 49 0.14 No 0 0 No -29 0.86 Yes 53 76.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190664807 + NM_000534 PMS1 0 . . . 0.88 66.42 24 5.86 Yes 67 0.46 No 0 0 No -23 0.83 Yes 35 73.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68840550 + NM_004360 CDH1 0 . . . 3.97 76.62 31 6.08 Yes 74 0.59 No 0 0 No -30 0.85 Yes 46 71.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152362958 - NM_005431 XRCC2 0 . . . 0.45 0 18 4.09 No 10 0 No 0 0 No -23 0.57 No 58 34.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68832585 + NM_133509 RAD51B 0 . . . 1.47 63.26 15 4.58 No 74 0.09 No 0 0 No -20 0.26 No 38 34.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56778840 + NM_058216 RAD51C 0 . . . 0.44 73.73 25 7.16 Yes 58 -3.89 No 0 0 No -24 0.75 Yes 48 75.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68370344 + NM_133509 RAD51B 0 . . . 4.04 75.68 14 5.54 No 3 1.51 Yes 0 0 No -26 0.63 No 44 91.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68830597 + NM_133509 RAD51B 0 . . . 4.51 78.12 28 5.95 Yes 52 0.81 Yes 0 0 No -27 0.78 Yes 52 68.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59805716 - NM_032043 BRIP1 0 . . . 5.2 0 14 4.47 No 51 0.77 No 0 0 No -41 0.44 No 50 55.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89690368 + NM_000314 PTEN 0 . . . 5.16 80.9 29 5.07 No 53 1.28 Yes 0 0 No -28 0.45 No 45 76.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68554096 + NM_133509 RAD51B 0 . . . 2.5 69.91 16 4.69 No 20 0.23 No 0 0 No -29 0.5 No 49 81.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68621557 + NM_133509 RAD51B 0 . . . 3.01 72.48 12 4.08 No 22 0.8 Yes 0 0 No -31 0.56 No 37 61.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41216882 - NM_007294 BRCA1 0 . . . 0.25 0 31 5.83 Yes 70 -4.64 No 0 0 No -22 0.44 No 51 59.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90966286 - NM_002485 NBN 0 . . . 0.07 0 31 5.48 No 44 1.82 Yes 0 0 No -23 0.64 No 18 67.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131897288 + NM_005732 RAD50 0 . . . 0.05 64.33 31 5.49 No 40 2.05 Yes 0 0 No -24 0.76 Yes 18 70.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68613764 + NM_133509 RAD51B 0 . . . 0.8 66.47 22 5.29 No 3 0.43 No 0 0 No -21 0.93 Yes 55 30.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75516744 - NM_001040108 MLH3 0 . . . 6.58 80.08 31 5.92 Yes 14 1.46 Yes 0 0 No -30 0.92 Yes 44 50.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47701255 + NM_000251 MSH2 0 . . . 5.4 73.74 26 6.31 Yes 46 0.93 Yes 0 0 No -25 0.82 Yes 42 70.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68838952 + NM_004360 CDH1 0 . . . 5.92 88.38 17 6.43 Yes 42 1.44 Yes 0 0 No -57 0.53 No 16 94.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1223257 + NM_000455 STK11 0 . . . 5.34 71.13 28 5.39 No 39 0.23 No 0 0 No -49 0.54 No 42 34.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68614061 + NM_133509 RAD51B 0 . . . 5.83 80.03 21 4.97 No 20 0.97 Yes 0 0 No -20 0.83 Yes 46 98.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68312534 + NM_133509 RAD51B 0 . . . 6.88 0 20 6.28 Yes 6 1.29 Yes 0 0 No -39 0.62 No 52 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69093197 + NM_133509 RAD51B 0 . . . 3.17 0 27 5.2 No 32 1.27 Yes 0 0 No -59 0.79 Yes 52 89.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68525414 + NM_133509 RAD51B 0 . . . 3.14 74.01 27 5.2 No 33 0.74 No 0 0 No -55 0.94 Yes 49 75.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68988576 + NM_133509 RAD51B 0 . . . 0.91 67.3 27 6.72 Yes 19 -1.64 No 0 0 No -26 0.56 No 49 91.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68836226 + NM_133509 RAD51B 0 . . . 0.12 59.31 21 3.68 No 34 0.79 Yes 0 0 No -21 0.92 Yes 42 93.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68643892 + NM_133509 RAD51B 0 . . . 2.32 62.9 15 4.99 No 74 0.83 Yes 0 0 No -22 0.48 No 27 42.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37092079 + NM_000249 MLH1 0 . . . 4.91 76.16 22 5.1 No 17 1.71 Yes 0 0 No -26 0.64 No 41 97.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131967251 + NM_005732 RAD50 0 . . . 2.86 74.11 17 4.8 No -2 0.11 No 0 0 No -25 0.51 No 44 48.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215608775 - NM_000465 BARD1 0 . . . 1.02 65.02 14 5.02 No 21 0.77 Yes 0 0 No -22 0.85 Yes 37 79.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215639014 - NM_000465 BARD1 0 . . . 6.47 72.51 35 5.86 Yes 2 1.16 Yes 0 0 No -28 0.64 No 51 43.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84395701 - NM_139076 FAM175A 0 . . . 5.71 85.02 32 5.46 No 7 1.27 Yes 0 0 No -31 0.91 Yes 51 87.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37077994 + NM_000249 MLH1 0 . . . 4.97 67.32 17 5.74 Yes 48 -3.47 No 0 0 No -26 0.78 Yes 53 53.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105192885 + NM_021930 RINT1 0 . . . 3.33 83.88 28 3.84 No 7 0.41 No 0 0 No -12 0.43 No 51 82.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215634248 - NM_000465 BARD1 0 . . . 6.21 82.31 29 6.26 Yes 4 0.68 No 0 0 No -28 0.82 Yes 40 93.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41197270 - NM_007294 BRCA1 0 . . . 0.12 0 41 7.57 Yes 25 1.05 Yes 0 0 No -40 0.79 Yes 38 67.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94151829 - NM_005591 MRE11 0 . . . 3.33 75.97 23 4.69 No -2 1.07 Yes 0 0 No -22 0.73 Yes 47 65.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68392241 + NM_133509 RAD51B 0 . . . 3.52 81.44 15 5.18 No 11 1.65 Yes 0 0 No -26 0.54 No 47 87.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68869790 + NM_004360 CDH1 0 . . . 1.37 0 21 4.92 No 56 -5.15 No 0 0 No -23 0.57 No 43 24.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68487519 + NM_133509 RAD51B 0 . . . 2.46 75.56 26 5.97 Yes 3 0.81 Yes 0 0 No -29 0.55 No 39 71.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56806311 + NM_058216 RAD51C 0 . . . 0.6 75.66 38 8.41 Yes 6 0.51 No 0 0 No -31 0.79 Yes 46 87.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105207351 + NM_021930 RINT1 0 . . . 2.96 64.65 27 6.17 Yes 59 -5.41 No 0 0 No -26 0.65 No 50 50.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68516848 + NM_133509 RAD51B 0 . . . 1.2 0 20 5.1 No 73 1.16 Yes 0 0 No -28 0.32 No 34 80.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47790015 + NM_000251 MSH2 0 . . . 0.91 67.31 57 7.99 Yes 43 1.1 Yes 0 0 No -60 0.31 No 15 73.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69017221 + NM_133509 RAD51B 0 . . . 1.98 0 25 5.36 No 31 0.44 No 0 0 No -22 0.83 Yes 54 91.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94168695 - NM_005591 MRE11 0 . . . 4.72 74.78 22 5.08 No 76 1.03 Yes 0 0 No -24 0.66 No 44 51.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68850001 + NM_004360 CDH1 0 . . . 7.18 84.11 13 4.67 No 38 1.25 Yes 0 0 No -56 0.23 No 44 72.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89708024 + NM_000314 PTEN 0 . . . 4.01 79.98 25 5.64 Yes 24 0.9 Yes 0 0 No -24 0.68 Yes 44 42.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84399663 - NM_139076 FAM175A 0 . . . 0.61 60.91 23 5.87 Yes 54 0.4 No 0 0 No -22 0.67 Yes 61 16.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215645201 - NM_000465 BARD1 0 . . . 2.26 53.07 30 5.65 Yes 60 -1.49 No 0 0 No -22 0.27 No 33 63.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29107790 - NM_001005735 CHEK2 0 . . . 1.56 66.54 21 4.58 No 1 1.61 Yes 0 0 No -23 0.55 No 50 53.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68758316 + NM_133509 RAD51B 0 . . . 0.78 70.98 15 5.66 Yes -1 1.19 Yes 0 0 No -28 0.87 Yes 47 48.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68869261 + NM_004360 CDH1 0 . . . 6.29 84.21 28 7.98 Yes 19 0.54 No 0 0 No -27 0.75 Yes 39 72.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68370627 + NM_133509 RAD51B 0 . . . 5.87 80.82 22 5.2 No 63 0.1 No 0 0 No -21 0.82 Yes 47 89.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152343335 - NM_005431 XRCC2 0 . . . 1.13 73.26 30 5.23 No 26 -3.05 No 0 0 No -29 0.63 No 53 30.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41257646 - NM_007294 BRCA1 0 . . . 4.69 74.94 16 5.1 No 33 0.9 Yes 0 0 No -45 0.62 No 44 62.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131964868 + NM_005732 RAD50 0 . . . 2.29 0 16 5.11 No 36 -0.76 No 0 0 No -20 0.34 No 43 39.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108141604 + NM_000051 ATM 0 . . . 4.31 85.02 19 7.07 Yes 4 1.2 Yes 0 0 No -18 0.71 Yes 54 74.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68553539 + NM_133509 RAD51B 0 . . . 4.36 67.75 11 5 No 71 0.23 No 0 0 No -20 0.26 No 47 67.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47650284 + NM_000251 MSH2 0 . . . 8.1 88.21 15 4.36 No 60 -0.92 No 0 0 No -14 0.32 No 20 57.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89675878 + NM_000314 PTEN 0 . . . 2.68 71.68 17 4.79 No 72 1.18 Yes 0 0 No -20 0.48 No 40 86.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108179026 + NM_000051 ATM 0 . . . 0.29 0 38 5.93 Yes 25 -1.92 No 0 0 No -22 0.68 Yes 42 44.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68630697 + NM_133509 RAD51B 0 . . . 0.15 81.6 32 7.55 Yes 10 0.5 No 0 0 No -31 0.85 Yes 48 42.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68637811 + NM_133509 RAD51B 0 . . . 1.96 57.11 35 5.51 No 33 0.46 No 0 0 No -29 0.76 Yes 41 42.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68794340 + NM_004360 CDH1 0 . . . 4.05 74.56 17 3.74 No 74 0.96 Yes 0 0 No -22 0.56 No 52 72.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56769993 + NM_058216 RAD51C 0 . . . 1.24 75.76 19 4.8 No 54 -4.35 No 0 0 No -18 0.59 No 30 29.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68366692 + NM_133509 RAD51B 0 . . . 0.66 65.84 19 4.97 No -3 0.9 Yes 0 0 No -24 0.67 Yes 61 39.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41228545 - NM_007294 BRCA1 0 . . . 0.81 0 27 5.74 Yes 9 0.01 No 0 0 No -26 0.73 Yes 49 90.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59928206 - NM_032043 BRIP1 0 . . . 2.28 69.39 24 3.96 No -4 0.08 No 0 0 No -23 0.5 No 45 96.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1212480 + NM_000455 STK11 0 . . . 4.01 72.19 21 5.09 No -2 -0.04 No 0 0 No -20 0.74 Yes 49 50.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68355727 + NM_133509 RAD51B 0 . . . 3.51 81.88 28 6.16 Yes -1 1.83 Yes 0 0 No -27 0.47 No 48 75.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190742020 + NM_000534 PMS1 0 . . . 0.64 78.37 37 4.79 No 28 1.16 Yes 0 0 No -36 0.63 No 15 43.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41011148 + NM_001164269 RAD51 0 . . . 2.49 70.11 35 6.68 Yes 71 -6.33 No 0 0 No -34 0.52 No 48 63.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56809018 + NM_058216 RAD51C 0 . . . 0.63 0 19 5 No 0 1.02 Yes 0 0 No -18 0.52 No 51 64.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68429055 + NM_133509 RAD51B 0 . . . 3.85 72.99 18 3.45 No -3 0.34 No 0 0 No -48 0.58 No 48 34.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47686171 + NM_000251 MSH2 0 . . . 6.1 85.39 38 5.65 Yes -3 0.06 No 0 0 No -35 0.75 Yes 50 76.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215668409 - NM_000465 BARD1 0 . . . 0.27 0 32 6.44 Yes -1 0.07 No 0 0 No -29 0.31 No 52 45.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215662727 - NM_000465 BARD1 0 . . . 2.85 76.03 28 5.44 No 0 0.03 No 0 0 No -27 0.76 Yes 58 71.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33432756 - NM_002878 RAD51D 0 . . . 1.53 69.21 17 6.93 Yes 13 0.45 No 0 0 No -29 0.38 No 45 84.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94156965 - NM_005591 MRE11 0 . . . 1.5 0 18 5.92 Yes 68 0.58 No 0 0 No -24 0.62 No 47 50.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23638999 - NM_024675 PALB2 0 . . . 6.9 79.24 29 5.97 Yes 29 0.9 Yes 0 0 No -28 0.81 Yes 29 95.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68660304 + NM_133509 RAD51B 0 . . . 2.53 77.92 22 4.68 No 10 0.07 No 0 0 No -20 0.42 No 48 34.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108230913 + NM_000051 ATM 0 . . . 1.14 51.55 61 7.43 Yes 72 -3.74 No 0 0 No -44 0.57 No 46 34.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69080106 + NM_133509 RAD51B 0 . . . 2.28 80.22 15 4.46 No 58 -3.78 No 0 0 No -26 0.4 No 53 45.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41258287 - NM_007294 BRCA1 0 . . . 6.02 90.95 19 5.82 Yes 18 0.67 No 0 0 No -18 0.67 Yes 48 66.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68931297 + NM_133509 RAD51B 0 . . . 3.74 70.04 28 4.42 No 33 -2.11 No 0 0 No -27 0.89 Yes 44 56.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131904817 + NM_005732 RAD50 0 . . . 2.77 67.45 23 5.72 Yes 60 -5.18 No 0 0 No -22 0.68 Yes 42 31.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105175225 + NM_021930 RINT1 0 . . . 4.98 80.1 30 6.72 Yes 46 -5.08 No 0 0 No -29 0.81 Yes 40 83.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94219834 - NM_005591 MRE11 0 . . . 8.3 73.57 78 7.58 Yes 3 1.08 Yes 0 0 No -33 0.9 Yes 24 65.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56788796 + NM_058216 RAD51C 0 . . . 1.38 72.44 47 7.89 Yes 75 -4.93 No 0 0 No -25 0.66 No 32 63.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104171211 - NM_001100119 XRCC3 0 . . . 1.69 73.28 30 6.32 Yes NA NA NA 0 0 No -29 0.77 Yes 52 26.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75481308 - NM_001040108 MLH3 0 . . . 4.15 78.66 39 5.62 Yes 46 0.58 No 0 0 No -20 0.43 No 49 57.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68858347 + NM_004360 CDH1 0 . . . 7.32 73.14 28 5.66 Yes 17 1.53 Yes 0 0 No -27 0.84 Yes 41 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23624747 - NM_024675 PALB2 0 . . . 5.92 82.31 34 5.83 Yes 58 1.16 Yes 0 0 No -34 0.49 No 55 45.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47787333 + NM_000251 MSH2 0 . . . 1.42 0 34 6.16 Yes 55 0.21 No 0 0 No -33 0.81 Yes 53 31.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68868623 + NM_004360 CDH1 0 . . . 1.33 69.92 27 5.72 Yes 35 0.91 Yes 0 0 No -26 0.83 Yes 23 57.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190661896 + NM_000534 PMS1 0 . . . 2.41 64.99 26 5.38 No 63 0.52 No 0 0 No -25 0.79 Yes 27 86.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69062279 + NM_133509 RAD51B 0 . . . 5.84 73.05 22 5.29 No 59 0.37 No 0 0 No -21 0.62 No 46 69.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69145572 + NM_133509 RAD51B 0 . . . 3.05 77.67 18 6.01 Yes 39 -3.4 No 0 0 No -25 0.52 No 46 79.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69132107 + NM_133509 RAD51B 0 . . . 7.8 75.29 17 4.58 No 35 -2.36 No 0 0 No -38 0.5 No 49 85.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47689746 + NM_000251 MSH2 0 . . . 0.92 65.19 31 5.98 Yes 65 -3.29 No 0 0 No -30 0.9 Yes 27 56.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68819724 + NM_133509 RAD51B 0 . . . 7.93 78.16 27 5.2 No 10 0.27 No 0 0 No -26 0.66 No 45 87.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108185681 + NM_000051 ATM 0 . . . 5.71 73.61 31 6.71 Yes 64 0.13 No 0 0 No -30 0.81 Yes 42 41.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215611604 - NM_000465 BARD1 0 . . . 4.96 91.21 24 4.84 No 12 1.32 Yes 0 0 No -26 0.6 No 46 93.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59876440 - NM_032043 BRIP1 0 . . . 0.45 72.51 24 5.16 No 71 -4.27 No 0 0 No -23 0.62 No 48 57.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108240258 + NM_000051 ATM 0 . . . 5.35 81.13 32 6.56 Yes 65 0.74 No 0 0 No -29 0.71 Yes 48 88.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59815467 - NM_032043 BRIP1 0 . . . 2.47 67.74 40 5.68 Yes 1 1.3 Yes 0 0 No -37 0.41 No 48 40.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32936990 + NM_000059 BRCA2 0 . . . 0.12 0 17 4.73 No 41 1.07 Yes 0 0 No -56 0.88 Yes 31 69.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32973716 + NM_000059 BRCA2 0 . . . 0.84 72.92 23 4.73 No 68 1.67 Yes 21 0.94 Yes -23 0.76 Yes 42 60.61 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr10 89645133 + NM_000314 PTEN 0 . . . 1.04 62.59 48 6.68 Yes 60 0.56 No 0 0 No -28 0.54 No 45 27.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108182752 + NM_000051 ATM 0 . . . 2.73 73.66 28 4.05 No 43 1.55 Yes 0 0 No -47 0.74 Yes 38 76.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68812556 + NM_004360 CDH1 0 . . . 5.07 71.98 29 5.92 Yes 10 0.17 No 0 0 No -26 0.58 No 43 53.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37075457 + NM_000249 MLH1 0 . . . 0.34 0 19 7.09 Yes 35 0.67 No 0 0 No -22 0.57 No 42 56.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37065318 + NM_000249 MLH1 0 . . . 1.98 83.56 30 4.95 No 13 0.56 No 0 0 No -22 0.76 Yes 50 93.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68713835 + NM_133509 RAD51B 0 . . . 3.42 72.09 26 5.39 No 52 0.52 No 0 0 No -53 0.76 Yes 42 61.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68907349 + NM_133509 RAD51B 0 . . . 1.11 80.42 29 5.83 Yes 54 0.62 No 0 0 No -28 0.82 Yes 54 58.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32921721 + NM_000059 BRCA2 0 . . . 0.64 74.78 9 3.87 No 58 0.18 No 0 0 No -43 0.72 Yes 62 23.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75502223 - NM_001040108 MLH3 0 . . . 2.45 82.65 29 6.32 Yes 16 0.7 No 0 0 No -28 0.85 Yes 42 90.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68422256 + NM_133509 RAD51B 0 . . . 4.43 0 13 3.92 No 35 2.26 Yes 0 0 No -22 0.65 No 23 94.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41194773 - NM_007294 BRCA1 0 . . . 7.5 78.69 20 5.1 No 0 0.92 Yes 0 0 No -23 0.66 Yes 42 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94161835 - NM_005591 MRE11 0 . . . 0.42 74.73 24 6.06 Yes 34 0.92 Yes 0 0 No -23 0.81 Yes 42 39.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108180388 + NM_000051 ATM 0 . . . 3.08 72.85 28 4.86 No 6 1.35 Yes 0 0 No -27 0.81 Yes 29 58.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215612043 - NM_000465 BARD1 0 . . . 1.87 74.88 29 6.59 Yes 60 -4.76 No 0 0 No -22 0.72 Yes 39 72.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29137037 - NM_001005735 CHEK2 0 . . . 1.08 84.22 14 4.51 No 33 1.15 Yes 0 0 No -28 0.7 Yes 50 47.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69077169 + NM_133509 RAD51B 0 . . . 10.41 89.6 21 5.2 No 72 0.93 Yes 0 0 No -20 0.72 Yes 44 86.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37078982 + NM_000249 MLH1 0 . . . 4.56 80.82 18 5.2 No 21 0.63 No 0 0 No -24 0.41 No 51 73.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68376699 + NM_133509 RAD51B 0 . . . 4.03 70.2 15 4.53 No 1 -2.13 No 0 0 No -17 0.65 No 44 43.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94180070 - NM_005591 MRE11 0 . . . 1.13 61.2 32 4.7 No 54 0.76 No 0 0 No -36 0.69 Yes 36 66.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41246975 - NM_007294 BRCA1 0 . . . 2.93 80.19 43 8.97 Yes 75 -3.65 No 0 0 No -28 0.51 No 46 90.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89673632 + NM_000314 PTEN 0 . . . 5.56 75.46 9 3.87 No 28 1.43 Yes 0 0 No -23 0.74 Yes 30 79.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68803672 + NM_004360 CDH1 0 . . . 0.23 68.8 20 5.57 Yes 32 -2 No 0 0 No -24 0.38 No 50 28.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59755017 - NM_032043 BRIP1 0 . . . 5.32 73.92 36 5.11 No 21 0.92 Yes 0 0 No -33 0.87 Yes 46 67.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90963272 - NM_002485 NBN 0 . . . 2.79 84.6 9 3.87 No 44 1.7 Yes 0 0 No -27 0.34 No 49 91.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29094768 - NM_001005735 CHEK2 0 . . . 4.56 84.78 35 7.11 Yes 59 0.58 No 0 0 No -34 0.69 Yes 45 60.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68571825 + NM_133509 RAD51B 0 . . . 4.12 71.84 23 8.27 Yes 71 1.15 Yes 0 0 No -22 0.58 No 51 73.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68804805 + NM_133509 RAD51B 0 . . . 0.04 0 49 7.91 Yes 11 -2.18 No 0 0 No -33 0.33 No 53 56.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47794435 + NM_000251 MSH2 0 . . . 0.22 70.05 21 4.69 No 11 1.4 Yes 0 0 No -23 0.81 Yes 47 69.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68635151 + NM_133509 RAD51B 0 . . . 2.46 84.47 33 4.28 No 38 0.56 No 0 0 No -26 0.52 No 48 66.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23640003 - NM_024675 PALB2 0 . . . 2.09 76.63 29 6.48 Yes 15 0.35 No 0 0 No -28 0.95 Yes 55 51.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59810405 - NM_032043 BRIP1 0 . . . 7.79 79.81 24 3.78 No 7 0.68 No 0 0 No -23 0.55 No 51 80.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68735378 + NM_133509 RAD51B 0 . . . 1.07 63.97 20 4.33 No 60 -1.57 No 0 0 No -30 0.67 Yes 36 70.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84394797 - NM_139076 FAM175A 0 . . . 4.17 75 17 5.38 No 64 0.79 Yes 0 0 No -26 0.41 No 47 37.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190735789 + NM_000534 PMS1 0 . . . 2.69 72.23 33 5.27 No 58 -3.49 No 0 0 No -23 0.38 No 43 85.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105201444 + NM_021930 RINT1 0 . . . 1.96 85.36 27 5.1 No 26 0.65 No 0 0 No -19 0.34 No 32 34.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68599159 + NM_133509 RAD51B 0 . . . 6.54 84.95 28 5.3 No 74 -4.39 No 0 0 No -27 0.54 No 43 79.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94206500 - NM_005591 MRE11 0 . . . 2.84 71.78 23 4.53 No 13 0.24 No 0 0 No -26 0.7 Yes 39 56.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47727359 + NM_000251 MSH2 0 . . . 0.44 75.83 23 4.71 No 22 1.05 Yes 0 0 No -51 0.87 Yes 36 92.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108127413 + NM_000051 ATM 0 . . . 4.08 79.85 25 5.54 No 24 1.79 Yes 0 0 No -24 0.51 No 34 72.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32903084 + NM_000059 BRCA2 0 . . . 3.6 74.76 44 7.27 Yes 11 0.83 Yes 0 0 No -37 0.38 No 47 65.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108141845 + NM_000051 ATM 0 . . . 1.45 65.45 31 6.08 Yes 37 1.52 Yes 0 0 No -30 0.89 Yes 62 26.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47675907 + NM_000251 MSH2 0 . . . 0.72 67.3 17 6.93 Yes 74 0.92 Yes 0 0 No -29 0.7 Yes 35 45.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68432280 + NM_133509 RAD51B 0 . . . 0.49 70.84 15 4.47 No -2 1.24 Yes 0 0 No -52 0.31 No 50 25.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215596451 - NM_000465 BARD1 0 . . . 6.93 82.1 13 4.22 No 63 0.65 No 0 0 No -13 0.27 No 45 56.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69100587 + NM_133509 RAD51B 0 . . . 3.46 80.4 28 5.17 No 48 -0.41 No 0 0 No -20 0.52 No 46 62.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68878715 + NM_133509 RAD51B 0 . . . 3.16 67.08 25 7.52 Yes 4 0.5 No 0 0 No -28 0.84 Yes 48 44.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59865143 - NM_032043 BRIP1 0 . . . 0.36 61.05 13 4.86 No 56 1.21 Yes 0 0 No -56 0.33 No 42 45.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1206425 + NM_000455 STK11 0 . . . 1.41 84.9 44 5.58 Yes NA NA NA 0 0 No -25 0.57 No 50 44.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152370578 - NM_005431 XRCC2 0 . . . 1.14 65.07 23 5.39 No 39 0.66 No 0 0 No -22 0.8 Yes 53 47.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68940279 + NM_133509 RAD51B 0 . . . 4.06 77.43 12 4.24 No 32 1.51 Yes 0 0 No -47 0.58 No 26 97.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215637819 - NM_000465 BARD1 0 . . . 4.75 73.59 20 4.93 No 12 0.14 No 0 0 No -25 0.59 No 46 84.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68684126 + NM_133509 RAD51B 0 . . . 0.92 72.1 14 5.2 No 56 -1.32 No 0 0 No -20 0.55 No 44 70.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41242729 - NM_007294 BRCA1 0 . . . 1.62 64.28 15 3.61 No 51 0.88 Yes 0 0 No -38 0.59 No 12 23.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75481634 - NM_001040108 MLH3 0 . . . 1.2 59.15 44 7.07 Yes 63 0.31 No 0 0 No -44 0.48 No 45 83.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29093993 - NM_001005735 CHEK2 0 . . . 3.6 77.76 29 8.27 Yes 60 0.34 No 0 0 No -28 0.87 Yes 46 65.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90963795 - NM_002485 NBN 0 . . . 4.16 70.15 32 4.95 No 50 0.84 Yes 0 0 No -31 0.63 No 40 53.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68336425 + NM_133509 RAD51B 0 . . . 1.74 76.09 18 4.69 No 61 -5.18 No 0 0 No -16 0.69 Yes 48 23.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29099903 - NM_001005735 CHEK2 0 . . . 2.41 74.91 19 5.2 No 50 1.43 Yes 0 0 No -32 0.52 No 43 94.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47735347 + NM_000251 MSH2 0 . . . 2.53 79.78 13 4.36 No 37 0.88 Yes 0 0 No -20 0.49 No 52 55.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41011492 + NM_001164269 RAD51 0 . . . 5.17 82.31 22 5.92 Yes 59 1.05 Yes 0 0 No -21 0.73 Yes 54 77.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59874172 - NM_032043 BRIP1 0 . . . 7.34 84.81 16 5.05 No 13 1.08 Yes 0 0 No -20 0.55 No 41 63.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21985471 - NM_000077 CDKN2A 0 . . . 4.58 64.16 17 5.12 No 17 0.62 No 0 0 No -22 0.82 Yes 41 90.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68404902 + NM_133509 RAD51B 0 . . . 2.27 78.39 21 4.9 No 5 1.26 Yes 0 0 No -20 0.82 Yes 53 59.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190655898 + NM_000534 PMS1 0 . . . 5.36 77.24 41 6.25 Yes 42 0.49 No 0 0 No -35 0.57 No 41 95.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131945861 + NM_005732 RAD50 0 . . . 1.84 61.03 33 6.5 Yes 26 0.42 No 0 0 No -37 0.64 No 32 95.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68441595 + NM_133509 RAD51B 0 . . . 1.87 66.93 52 7.34 Yes 36 0.2 No 0 0 No -51 0.55 No 45 50.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32932483 + NM_000059 BRCA2 0 . . . 2.78 67.82 11 4.97 No 69 -2.8 No 0 0 No -23 0.78 Yes 52 32.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190649108 + NM_000534 PMS1 0 . . . 1.21 82.21 25 4.07 No 29 -1.97 No 0 0 No -24 0.89 Yes 45 19.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41201702 - NM_007294 BRCA1 0 . . . 4.96 0 59 8.84 Yes 57 1.2 Yes 0 0 No -46 0.38 No 38 56.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94154121 - NM_005591 MRE11 0 . . . 3.41 81.53 12 4.24 No 9 0.95 Yes 0 0 No -28 0.83 Yes 49 95.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59900153 - NM_032043 BRIP1 0 . . . 3.61 64.72 34 8.12 Yes 18 -2.71 No 0 0 No -33 0.76 Yes 41 58.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131972152 + NM_005732 RAD50 0 . . . 2.53 71.68 35 7.13 Yes -1 0.14 No 0 0 No -34 0.72 Yes 43 59.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108119271 + NM_000051 ATM 0 . . . 9.81 90.28 19 5.83 Yes 32 1.08 Yes 0 0 No -27 0.78 Yes 44 96.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59902639 - NM_032043 BRIP1 0 . . . 2.15 0 32 7.27 Yes 44 0.85 Yes 0 0 No -31 0.76 Yes 14 44.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89675180 + NM_000314 PTEN 0 . . . 0.11 0 16 4.83 No 50 1.67 Yes 0 0 No -24 0.4 No 17 50.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69051224 + NM_133509 RAD51B 0 . . . 6.3 75.23 9 3.87 No 29 2.25 Yes 0 0 No -31 0.51 No 48 47.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68290112 + NM_133509 RAD51B 0 . . . 2.38 84.42 13 5.48 No 49 0.65 No 0 0 No -28 0.49 No 54 76.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47683382 + NM_000251 MSH2 0 . . . 0.18 68.31 46 4.98 No 68 0.74 No 0 0 No -33 0.76 Yes 48 65.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68699065 + NM_133509 RAD51B 0 . . . 4.12 74.44 16 5.51 No 63 -5.21 No 0 0 No -37 0.64 No 50 81.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105190646 + NM_021930 RINT1 0 . . . 8.72 85.48 34 4.01 No 11 0.5 No 0 0 No -18 0.71 Yes 47 90.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68813577 + NM_133509 RAD51B 0 . . . 5.26 79.76 21 5.1 No 70 1.47 Yes 0 0 No -29 0.41 No 45 48.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84383132 - NM_139076 FAM175A 0 . . . 3.51 71.18 61 6.98 Yes 2 0.42 No 0 0 No -23 0.47 No 43 75.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94216630 - NM_005591 MRE11 0 . . . 5.81 81.16 22 5 No 3 0.22 No 0 0 No -21 0.41 No 49 72.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47675069 + NM_000251 MSH2 0 . . . 0.24 73.72 22 5.82 Yes 57 1.31 Yes 0 0 No -21 0.9 Yes 44 67.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47657313 + NM_000251 MSH2 0 . . . 1.77 84.22 55 7.5 Yes 33 0.99 Yes 0 0 No -29 0.45 No 25 45.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190672878 + NM_000534 PMS1 0 . . . 5.37 74.45 11 3.87 No 8 1.05 Yes 0 0 No -25 0.5 No 50 38.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37048635 + NM_000249 MLH1 0 . . . 2.55 66.04 39 5.96 Yes 37 0.51 No 0 0 No -28 0.66 Yes 45 51.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108184464 + NM_000051 ATM 0 . . . 3.34 63.91 32 5.21 No 29 1.28 Yes 0 0 No -34 0.41 No 16 59.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59832295 - NM_032043 BRIP1 0 . . . 0.41 73.79 36 6.01 Yes -4 1.65 Yes 0 0 No -35 0.94 Yes 36 61.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75515865 - NM_001040108 MLH3 0 . . . 0.31 64.37 25 5.2 No 34 1.34 Yes 0 0 No -24 0.95 Yes 14 60.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68424490 + NM_133509 RAD51B 0 . . . 7 82.94 40 5.91 Yes 12 0.23 No 0 0 No -36 0.93 Yes 46 34.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68836627 + NM_004360 CDH1 0 . . . 2.05 81.44 20 4.69 No 13 1.51 Yes 0 0 No -19 0.83 Yes 45 90.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41201041 - NM_007294 BRCA1 0 . . . 3.1 73.38 21 5.74 Yes 33 -1.39 No 0 0 No -20 0.81 Yes 44 59.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41205681 - NM_007294 BRCA1 0 . . . 0.54 84.41 53 7.19 Yes 16 0.84 Yes 0 0 No -28 0.59 No 42 57.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190659492 + NM_000534 PMS1 0 . . . 6.1 73.28 22 5.4 No 64 -3.96 No 0 0 No -21 0.58 No 36 56.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215650890 - NM_000465 BARD1 0 . . . 2.96 77.55 12 5.01 No 29 0.64 No 0 0 No -25 0.7 Yes 32 53.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23641908 - NM_024675 PALB2 0 . . . 0.27 57.82 34 6 Yes 46 0.73 No 0 0 No -19 0.46 No 41 58.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59781297 - NM_032043 BRIP1 0 . . . 3.82 73.61 20 6.93 Yes -4 0.35 No 0 0 No -28 0.54 No 46 40.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68634674 + NM_133509 RAD51B 0 . . . 6.78 79.72 18 4.9 No 30 1.01 Yes 0 0 No -25 0.77 Yes 40 52.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68435998 + NM_133509 RAD51B 0 . . . 5.69 88.36 19 5 No 45 -4.64 No 0 0 No -39 0.56 No 34 50.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215593219 - NM_000465 BARD1 0 . . . 5.75 79.92 34 5.74 Yes 63 0.51 No 0 0 No -33 0.59 No 50 78.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89638648 + NM_000314 PTEN 0 . . . 6.69 88.14 17 4.8 No -1 0.96 Yes 0 0 No -46 0.76 Yes 52 55.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68373597 + NM_133509 RAD51B 0 . . . 0.75 71.93 19 4.99 No 39 0.75 No 0 0 No -52 0.61 No 49 52.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68400939 + NM_133509 RAD51B 0 . . . 6.51 77.76 20 5.54 No 43 0.87 Yes 0 0 No -17 0.48 No 36 73.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108102597 + NM_000051 ATM 0 . . . 1.47 65.33 36 6.13 Yes 39 0.65 No 0 0 No -28 0.38 No 26 59.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59875503 - NM_032043 BRIP1 0 . . . 0.2 73.22 26 6.05 Yes -4 0.2 No 0 0 No -25 0.57 No 51 49.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7569008 - NM_000546 TP53 0 . . . 4.71 84.22 22 4.69 No 33 0.91 Yes 0 0 No -21 0.65 No 50 92.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45794411 - NM_001048171 MUTYH 0 . . . 6.28 78.11 38 5.7 Yes 24 1.87 Yes 0 0 No -38 0.5 No 34 70.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89663347 + NM_000314 PTEN 0 . . . 1.18 73.18 18 5.38 No 26 0.88 Yes 0 0 No -28 0.46 No 49 43.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94167911 - NM_005591 MRE11 0 . . . 5.72 89.41 28 6.24 Yes 75 -5.09 No 0 0 No -27 0.86 Yes 47 38.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68956763 + NM_133509 RAD51B 0 . . . 1.4 72.76 28 5.48 No -2 0.46 No 0 0 No -27 0.88 Yes 51 64.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89622987 + NM_000314 PTEN 0 . . . 4.81 76.04 34 5.75 Yes 73 1.39 Yes 0 0 No -23 0.57 No 36 33.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68826667 + NM_133509 RAD51B 0 . . . 7.45 83.38 21 5.2 No -1 0.45 No 0 0 No -20 0.79 Yes 44 61.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47635867 + NM_000251 MSH2 0 . . . 2.37 75.77 23 5.01 No 76 -4.74 No 0 0 No -22 0.48 No 44 45.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215651355 - NM_000465 BARD1 0 . . . 4.44 80.77 38 6.76 Yes 1 0.04 No 0 0 No -37 0.42 No 43 59.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68801347 + NM_133509 RAD51B 0 . . . 5.55 77.62 21 3.53 No 71 -3.23 No 0 0 No -28 0.29 No 46 76.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108126337 + NM_000051 ATM 0 . . . 1.75 80.12 37 7.66 Yes 7 1.43 Yes 0 0 No -36 0.91 Yes 51 66.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69136083 + NM_133509 RAD51B 0 . . . 11.75 87.71 25 5.2 No 22 2.57 Yes 0 0 No -24 0.96 Yes 36 92.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89641331 + NM_000314 PTEN 0 . . . 4.47 69.24 13 4.36 No 10 1 Yes 0 0 No -33 0.68 Yes 48 91.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68755825 + NM_133509 RAD51B 0 . . . 1.65 71.17 16 4.49 No 54 -4.67 No 0 0 No -22 0.89 Yes 51 56.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68663025 + NM_133509 RAD51B 0 . . . 4.54 83.59 14 5.29 No 4 1.43 Yes 0 0 No -30 0.67 Yes 45 78.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75491606 - NM_001040108 MLH3 0 . . . 0.79 63.43 42 6.56 Yes 22 0.88 Yes 0 0 No -41 0.72 Yes 36 59.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190701861 + NM_000534 PMS1 0 . . . 0.11 77.74 35 5.44 No 39 0.54 No 0 0 No -27 0.47 No 55 45.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69038563 + NM_133509 RAD51B 0 . . . 3.86 88.17 22 4.41 No 74 -1.68 No 0 0 No -21 0.59 No 15 61.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69094905 + NM_133509 RAD51B 0 . . . 0.21 73.75 36 5.94 Yes 36 0.75 No 0 0 No -22 0.36 No 48 83.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59838925 - NM_032043 BRIP1 0 . . . 4.13 72.45 19 5.39 No 20 1.17 Yes 0 0 No -22 0.35 No 38 76.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68860251 + NM_133509 RAD51B 0 . . . 4.16 75.65 14 4.47 No 48 0.6 No 0 0 No -22 0.74 Yes 42 55.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59937704 - NM_032043 BRIP1 0 . . . 2.69 66.99 21 5.2 No 28 0.71 No 0 0 No -42 0.63 No 39 92.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68555510 + NM_133509 RAD51B 0 . . . 5.17 74.85 33 5.79 Yes 50 0.35 No 0 0 No -26 0.51 No 45 88.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105183154 + NM_021930 RINT1 0 . . . 4.8 74.61 25 5.51 No 23 0.97 Yes 0 0 No -18 0.39 No 35 96.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56784551 + NM_058216 RAD51C 0 . . . 0.45 0 20 5.08 No 7 0.99 Yes 0 0 No -19 0.66 Yes 51 81.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59889392 - NM_032043 BRIP1 0 . . . 1.77 72.96 23 4.9 No -1 0.98 Yes 0 0 No -22 0.88 Yes 34 42.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68564175 + NM_133509 RAD51B 0 . . . 2.26 69.32 22 4.78 No 59 1.61 Yes 0 0 No -21 0.75 Yes 45 91.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1218199 + NM_000455 STK11 0 . . . 1.76 67.7 28 6.18 Yes 24 1.9 Yes 0 0 No -23 0.49 No 34 42.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59783590 - NM_032043 BRIP1 0 . . . 1.51 61.45 23 5.39 No 60 -5.09 No 0 0 No -22 0.53 No 52 28.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29090451 - NM_001005735 CHEK2 0 . . . 10.14 79.18 30 4.48 No 10 1.53 Yes 0 0 No -46 0.69 Yes 48 69.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68537061 + NM_133509 RAD51B 0 . . . 1.98 80.58 29 5.74 Yes 41 0.38 No 0 0 No -33 0.55 No 17 91.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190721817 + NM_000534 PMS1 0 . . . 0.5 69.7 28 5.09 No 51 0.93 Yes 0 0 No -27 0.49 No 55 70.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47728780 + NM_000251 MSH2 0 . . . 1.39 62.22 27 6.31 Yes 69 -2.71 No 0 0 No -26 0.83 Yes 28 62.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41269729 - NM_007294 BRCA1 0 . . . 1.82 84.17 23 7.21 Yes 46 0.92 Yes 0 0 No -22 0.58 No 20 53.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215632745 - NM_000465 BARD1 0 . . . 5 75.17 27 5.39 No 33 0.79 Yes 0 0 No -26 0.94 Yes 35 94.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94227367 - NM_005591 MRE11 0 . . . 7.35 72.95 20 5.07 No 14 0.69 No 0 0 No -23 0.7 Yes 44 66.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69052317 + NM_133509 RAD51B 0 . . . 0.04 79.52 28 5.19 No -1 0.25 No 0 0 No -32 0.64 No 51 32.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56786808 + NM_058216 RAD51C 0 . . . 4.31 0 17 3.8 No 51 0.42 No 0 0 No -25 0.4 No 50 87.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215608480 - NM_000465 BARD1 0 . . . 4.32 61.47 21 5.09 No 60 -3.14 No 0 0 No -20 0.83 Yes 38 36.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37044893 + NM_000249 MLH1 0 . . . 0.76 0 31 4.63 No 7 1.47 Yes 0 0 No -30 0.69 Yes 18 80.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41019527 + NM_001164269 RAD51 0 . . . 0.73 83.14 34 5.92 Yes 41 0.54 No 0 0 No -33 0.72 Yes 29 75.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59886929 - NM_032043 BRIP1 0 . . . 0.33 0 25 5.9 Yes 11 0.95 Yes 0 0 No -24 0.85 Yes 43 58.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152360423 - NM_005431 XRCC2 0 . . . 7.03 82.08 14 3.39 No 33 0.85 Yes 0 0 No -17 0.74 Yes 30 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68609026 + NM_133509 RAD51B 0 . . . 7.32 81.47 21 5.74 Yes 30 0.84 Yes 0 0 No -26 0.54 No 32 87.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47653687 + NM_000251 MSH2 0 . . . 3.73 68.34 26 3.29 No 21 1.04 Yes 0 0 No -22 0.31 No 37 65.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68776077 + NM_133509 RAD51B 0 . . . 1.87 69.99 30 5.75 Yes 43 0.7 No 0 0 No -29 0.72 Yes 50 44.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89698257 + NM_000314 PTEN 0 . . . 0 71.37 22 6.11 Yes 74 0.97 Yes 0 0 No -21 0.95 Yes 54 41.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68683354 + NM_133509 RAD51B 0 . . . 2.64 86.61 26 4.14 No 4 0.69 No 0 0 No -25 0.77 Yes 49 64.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68472879 + NM_133509 RAD51B 0 . . . 0.98 64.34 43 4.75 No 64 0.24 No 0 0 No -28 0.53 No 45 29.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68588205 + NM_133509 RAD51B 0 . . . 0.05 67.5 37 5.95 Yes 38 1.23 Yes 0 0 No -33 0.38 No 52 60.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41205910 - NM_007294 BRCA1 0 . . . 8.88 92.1 12 4.24 No 8 1.43 Yes 0 0 No -32 0.59 No 50 92.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69127532 + NM_133509 RAD51B 0 . . . 0.91 84.33 40 6.7 Yes 20 -0.67 No 0 0 No -28 0.63 No 51 72.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68793801 + NM_004360 CDH1 0 . . . 8.05 82.32 28 5.37 No 72 -4.11 No 0 0 No -27 0.7 Yes 47 63.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190688294 + NM_000534 PMS1 0 . . . 3.75 78.72 31 5.29 No 44 0.44 No 0 0 No -30 0.76 Yes 33 73.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68879566 + NM_133509 RAD51B 0 . . . 0.14 63.7 29 3.87 No 75 1.13 Yes 0 0 No -28 0.92 Yes 51 28.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105186432 + NM_021930 RINT1 0 . . . 2 85.02 36 6.08 Yes 71 0.04 No 0 0 No -35 0.52 No 53 58.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29100992 - NM_001005735 CHEK2 0 . . . 4.24 74.71 23 5.2 No 11 0.49 No 0 0 No -22 0.61 No 47 95.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68780731 + NM_133509 RAD51B 0 . . . 3.21 76.87 19 5.47 No 70 -3.82 No 0 0 No -23 0.85 Yes 47 49.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41254847 - NM_007294 BRCA1 0 . . . 3.94 67.19 11 4.12 No 57 -3.33 No 0 0 No -35 0.45 No 48 67.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68629808 + NM_133509 RAD51B 0 . . . 1.56 73.42 18 6.66 Yes 42 0.76 No 0 0 No -24 0.39 No 44 65.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68811716 + NM_133509 RAD51B 0 . . . 8.37 84.41 34 6.12 Yes 8 1.35 Yes 0 0 No -33 0.67 Yes 47 59.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59848385 - NM_032043 BRIP1 0 . . . 7.11 83.29 29 5.77 Yes 44 1.39 Yes 0 0 No -28 0.92 Yes 47 70.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94196941 - NM_005591 MRE11 0 . . . 6.06 75.04 32 5.92 Yes 54 1.58 Yes 0 0 No -31 0.38 No 34 52.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68582925 + NM_133509 RAD51B 0 . . . 2.73 79.86 18 5.94 Yes 60 0.33 No 0 0 No -25 0.71 Yes 51 85.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152355097 - NM_005431 XRCC2 0 . . . 2.84 82.05 43 6.27 Yes 15 0.02 No 0 0 No -22 0.65 No 48 38.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215655542 - NM_000465 BARD1 0 . . . 1.59 0 19 5 No 66 -5.5 No 0 0 No -44 0.57 No 47 66.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94205240 - NM_005591 MRE11 0 . . . 1.51 75.46 27 5.2 No 56 1 Yes 0 0 No -26 0.69 Yes 45 60.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131975982 + NM_005732 RAD50 0 . . . 3.39 79.63 29 5.7 Yes 5 1.41 Yes 0 0 No -28 0.86 Yes 53 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108184519 + NM_000051 ATM 0 . . . 3.7 70.86 20 4.78 No 51 -3.99 No 0 0 No -26 0.57 No 48 48.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694514 + NM_000534 PMS1 0 . . . 5 81.41 22 4.97 No 16 1.41 Yes 0 0 No -25 0.77 Yes 50 63.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56772528 + NM_058216 RAD51C 0 . . . 3.21 80.16 25 7.21 Yes 67 0.77 No 0 0 No -24 0.76 Yes 47 48.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108122117 + NM_000051 ATM 0 . . . 3.9 70.14 20 5.13 No 65 -6.17 No 0 0 No -19 0.56 No 51 70 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68766467 + NM_133509 RAD51B 0 . . . 1.76 77.3 22 5.81 Yes 68 -2.38 No 0 0 No -27 0.7 Yes 46 57.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68789862 + NM_133509 RAD51B 0 . . . 4.3 73.27 35 5.4 No -4 1.34 Yes 0 0 No -25 0.46 No 42 33.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131981745 + NM_005732 RAD50 0 . . . 2.75 73.95 35 6.6 Yes 69 -4.39 No 0 0 No -25 0.49 No 49 54.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23616996 - NM_024675 PALB2 0 . . . 0.32 74.68 21 7.21 Yes 4 0.1 No 0 0 No -20 0.8 Yes 54 73.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89630385 + NM_000314 PTEN 0 . . . 2.16 72.65 30 5.46 No 44 0.5 No 0 0 No -35 0.86 Yes 40 78.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68289984 + NM_133509 RAD51B 0 . . . 1.71 74.91 37 4.24 No 72 -6.41 No 0 0 No -26 0.43 No 48 53.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47660556 + NM_000251 MSH2 0 . . . 5.14 85.18 19 4.64 No 75 -0.51 No 0 0 No -18 0.84 Yes 48 33.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190692282 + NM_000534 PMS1 0 . . . 3.12 74.66 14 5 No 70 -5.74 No 0 0 No -18 0.53 No 51 72.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190683595 + NM_000534 PMS1 0 . . . 1.57 67.91 29 5.81 Yes 25 0.51 No 0 0 No -28 0.5 No 33 49.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59875599 - NM_032043 BRIP1 0 . . . 0.77 77.74 23 4.15 No 25 -0.8 No 0 0 No -18 0.52 No 19 86.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215595526 - NM_000465 BARD1 0 . . . 5.61 69.78 40 7.35 Yes 51 1.17 Yes 0 0 No -39 0.82 Yes 45 68.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68876002 + NM_133509 RAD51B 0 . . . 2.18 77.28 52 7.14 Yes 39 0.67 No 0 0 No -44 0.72 Yes 49 61.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131892476 + NM_005732 RAD50 0 . . . 3.69 69.92 25 3.61 No 15 0.51 No 0 0 No -24 0.8 Yes 43 92.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84398214 - NM_139076 FAM175A 0 . . . 10.15 87.84 28 5.83 Yes 11 0.14 No 0 0 No -30 0.83 Yes 47 78.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68701529 + NM_133509 RAD51B 0 . . . 2.43 65.2 27 4.21 No 67 -3.59 No 0 0 No -26 0.93 Yes 41 46.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68516327 + NM_133509 RAD51B 0 . . . 3.94 0 32 6.11 Yes 61 1.74 Yes 0 0 No -31 0.74 Yes 40 82.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32894798 + NM_000059 BRCA2 0 . . . 1.12 66.6 15 3.87 No 72 0.42 No 0 0 No -28 0.83 Yes 46 51.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6043651 - NM_000535 PMS2 0 . . . 0.01 68.38 40 6.9 Yes 38 -3.45 No 0 0 No -39 0.47 No 49 29.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45797118 - NM_001048171 MUTYH 0 . . . 1.75 76.72 45 7.47 Yes 50 -2.47 No 0 0 No -22 0.88 Yes 46 91.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32951287 + NM_000059 BRCA2 0 . . . 4.59 76.31 24 5.92 Yes 12 0.9 Yes 0 0 No -23 0.78 Yes 46 86.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29095330 - NM_001005735 CHEK2 0 . . . 3.61 76.49 32 5.28 No -3 0.76 No 0 0 No -21 0.4 No 61 34.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94217319 - NM_005591 MRE11 0 . . . 6.05 79.74 19 4.9 No 15 0.29 No 0 0 No -26 0.57 No 37 66.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105202478 + NM_021930 RINT1 0 . . . 4.01 75.46 19 5.31 No 7 0.67 No 0 0 No -22 0.78 Yes 43 38.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40996664 + NM_001164269 RAD51 0 . . . 2.2 67.57 25 5.9 Yes 72 1.54 Yes 0 0 No -24 0.8 Yes 39 76.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68288224 + NM_133509 RAD51B 0 . . . 0.51 0 20 5.22 No 7 0.88 Yes 0 0 No -19 0.64 No 11 46.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29108306 - NM_001005735 CHEK2 0 . . . 2.78 65.41 20 5.64 Yes 16 1 Yes 0 0 No -26 0.44 No 37 71.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59792460 - NM_032043 BRIP1 0 . . . 0.78 84.22 32 5.62 Yes 76 1.43 Yes 0 0 No -29 0.57 No 50 46.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90951069 - NM_002485 NBN 0 . . . 0.5 0 30 6 Yes 47 -3.96 No 0 0 No -29 0.88 Yes 53 70.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68799914 + NM_004360 CDH1 0 . . . 0.32 74.68 17 4.46 No 49 0.32 No 0 0 No -16 0.49 No 54 79.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29123392 - NM_001005735 CHEK2 0 . . . 2.47 61.73 14 5.4 No 66 -4.3 No 0 0 No -24 0.57 No 47 47.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190722687 + NM_000534 PMS1 0 . . . 0.75 70.46 11 4 No 60 -6.26 No 0 0 No -27 0.5 No 49 46.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640083 + NM_000251 MSH2 0 . . . 4 81.88 18 4.11 No 62 1.17 Yes 0 0 No -17 0.56 No 53 75.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41200488 - NM_007294 BRCA1 0 . . . 0.09 74.68 20 4.85 No 4 0.41 No 0 0 No -24 0.36 No 54 86.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1208965 + NM_000455 STK11 0 . . . 0.28 65.9 19 6.56 Yes 60 -2.52 No 0 0 No -31 0.46 No 55 31.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131937437 + NM_005732 RAD50 0 . . . 0.64 62.05 21 4.79 No 67 0.82 Yes 0 0 No -24 0.42 No 47 43.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131953008 + NM_005732 RAD50 0 . . . 0.14 66.57 36 5.61 Yes 21 0.55 No 0 0 No -35 0.87 Yes 37 76.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41212597 - NM_007294 BRCA1 0 . . . 0.64 66.62 16 5.06 No 52 -3.26 No 0 0 No -21 0.68 Yes 61 22.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69027061 + NM_133509 RAD51B 0 . . . 1.13 68.85 20 6.78 Yes 0 0.93 Yes 0 0 No -34 0.47 No 18 82.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59835253 - NM_032043 BRIP1 0 . . . 2.89 83.33 14 4.85 No 33 1.21 Yes 0 0 No -18 0.41 No 50 85.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69069064 + NM_133509 RAD51B 0 . . . 1.34 71.29 21 5.14 No -2 1.04 Yes 0 0 No -20 0.43 No 24 51.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68413063 + NM_133509 RAD51B 0 . . . 3.29 61.95 18 6.08 Yes 18 0.43 No 0 0 No -23 0.45 No 40 53.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48022365 + NM_000179 MSH6 0 . . . 3.56 65 9 3.87 No 73 0.49 No 0 0 No -34 0.48 No 47 87.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69094621 + NM_133509 RAD51B 0 . . . 4.8 73.9 20 7.13 Yes 32 0.6 No 0 0 No -19 0.53 No 36 64.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94203954 - NM_005591 MRE11 0 . . . 2.6 63.93 14 4.86 No 45 0.33 No 0 0 No -22 0.63 No 40 32.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59765319 - NM_032043 BRIP1 0 . . . 6.08 80.22 37 6.52 Yes 61 -3.61 No 0 0 No -36 0.55 No 51 91.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68313965 + NM_133509 RAD51B 0 . . . 5.48 67.54 38 5.16 No 23 0.02 No 0 0 No -30 0.4 No 45 77.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6009351 - NM_000535 PMS2 0 . . . 4.02 70.55 21 5.57 Yes 15 1.21 Yes 0 0 No -24 0.69 Yes 43 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6017674 - NM_000535 PMS2 0 . . . 3.66 85.81 19 3.63 No 9 1.03 Yes 0 0 No -19 0.61 No 49 92.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7580301 - NM_000546 TP53 0 . . . 3.45 77.69 32 6.17 Yes 58 -3.83 No 0 0 No -31 0.36 No 48 83.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90997838 - NM_002485 NBN 0 . . . 0.03 0 15 6 Yes 47 1.38 Yes 0 0 No -29 0.29 No 16 73.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41212471 - NM_007294 BRCA1 0 . . . 2.04 76.91 16 5.83 Yes 68 0.48 No 0 0 No -15 0.38 No 54 80.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68750852 + NM_133509 RAD51B 0 . . . 6.53 77.35 19 5.87 Yes 59 1.31 Yes 0 0 No -21 0.59 No 47 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190683478 + NM_000534 PMS1 0 . . . 2.35 80.95 33 6.24 Yes 37 1 Yes 0 0 No -29 0.7 Yes 21 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190652944 + NM_000534 PMS1 0 . . . 2.16 69.89 26 3.64 No 47 0.8 Yes 0 0 No -20 0.66 Yes 50 80.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68361472 + NM_133509 RAD51B 0 . . . 4.41 77.32 18 4.04 No 7 0.81 Yes 0 0 No -22 0.46 No 36 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68775475 + NM_133509 RAD51B 0 . . . 4.69 76.68 26 4.97 No 66 1.03 Yes 0 0 No -25 0.52 No 47 57.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131900702 + NM_005732 RAD50 0 . . . 1.07 0 16 4.69 No 45 -4.31 No 0 0 No -40 0.78 Yes 56 75.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89634528 + NM_000314 PTEN 0 . . . 3.19 77.28 16 5.09 No 37 0.69 No 0 0 No -25 0.62 No 41 60.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56782130 + NM_058216 RAD51C 0 . . . 5.29 83.1 52 8.17 Yes 42 0.89 Yes 0 0 No -24 0.69 Yes 40 67.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6047410 - NM_000535 PMS2 0 . . . 1.28 80.73 54 9.16 Yes 27 0.48 No 0 0 No -23 0.72 Yes 42 60.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68930289 + NM_133509 RAD51B 0 . . . 2.21 59.84 22 4.8 No 58 -2.79 No 0 0 No -21 0.63 No 48 61.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68913624 + NM_133509 RAD51B 0 . . . 5.78 78.86 23 5.92 Yes 14 0.61 No 0 0 No -22 0.54 No 44 86.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69144564 + NM_133509 RAD51B 0 . . . 3.23 79.01 24 5.18 No 62 -2.99 No 0 0 No -22 0.91 Yes 35 59.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59936321 - NM_032043 BRIP1 0 . . . 2.33 86.9 22 5 No 3 0.71 No 0 0 No -21 0.85 Yes 50 89.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190709296 + NM_000534 PMS1 0 . . . 0.4 82.29 28 5.42 No 76 -5.13 No 0 0 No -27 0.91 Yes 45 82.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47648592 + NM_000251 MSH2 0 . . . 8.72 83.82 31 5.57 Yes 68 0.76 No 0 0 No -25 0.55 No 52 78.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89730251 + NM_000314 PTEN 0 . . . 7.81 77.53 28 5.48 No 32 0.63 No 0 0 No -25 0.65 No 46 92.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59888716 - NM_032043 BRIP1 0 . . . 1.13 74.68 14 4.12 No 64 0.34 No 0 0 No -26 0.64 No 36 23.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68289537 + NM_133509 RAD51B 0 . . . 5.35 73.01 36 5.76 Yes -4 1.25 Yes 0 0 No -25 0.57 No 47 85.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190662782 + NM_000534 PMS1 0 . . . 5.29 77.76 10 4 No 67 -5.98 No 0 0 No -28 0.61 No 47 74.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23628130 - NM_024675 PALB2 0 . . . 0.43 61.82 21 5.1 No 24 0.31 No 0 0 No -60 0.4 No 46 88.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68810554 + NM_133509 RAD51B 0 . . . 4.51 0 40 6.1 Yes 2 0.35 No 0 0 No -24 0.56 No 56 49.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668074 - NM_000465 BARD1 0 . . . 0.74 66.62 11 4.01 No 50 0.81 Yes 0 0 No -32 0.75 Yes 43 47.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68970610 + NM_133509 RAD51B 0 . . . 3.29 66.94 17 5.03 No 37 0.73 No 0 0 No -23 0.54 No 44 73.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68778139 + NM_133509 RAD51B 0 . . . 3.45 79.21 144 12.63 Yes 7 0.96 Yes 0 0 No -19 0.5 No 36 65.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32967535 + NM_000059 BRCA2 0 . . . 2.73 80.14 19 5.45 No 55 -2.39 No 0 0 No -23 0.85 Yes 39 53.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68684034 + NM_133509 RAD51B 0 . . . 4.72 83.79 42 4.89 No 27 1.27 Yes 0 0 No -35 0.55 No 31 62.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41197914 - NM_007294 BRCA1 0 . . . 3.65 71.91 20 4.75 No 69 0.46 No 0 0 No -19 0.66 No 46 53.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108101069 + NM_000051 ATM 0 . . . 0.24 82.27 20 3.24 No 62 -5.46 No 0 0 No -19 0.26 No 45 26.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59881460 - NM_032043 BRIP1 0 . . . 6.58 84.04 33 5 No 22 0.24 No 0 0 No -32 0.52 No 44 74.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131966943 + NM_005732 RAD50 0 . . . 2.02 0 27 5.38 No 39 1.78 Yes 0 0 No -22 0.53 No 13 43.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68814671 + NM_004360 CDH1 0 . . . 6.61 84.2 25 4.98 No 75 0.58 No 0 0 No -24 0.71 Yes 46 80.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68425439 + NM_133509 RAD51B 0 . . . 2.87 0 34 5.74 Yes 1 0.83 Yes 0 0 No -22 0.46 No 50 49.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48011906 + NM_000179 MSH6 0 . . . 8.43 76.03 14 6.8 Yes 54 0.76 No 0 0 No -22 0.73 Yes 47 78.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47712463 + NM_000251 MSH2 0 . . . 5.07 68.84 17 5.56 Yes 58 -3.59 No 0 0 No -24 0.49 No 48 30.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68935358 + NM_133509 RAD51B 0 . . . 1.4 71.01 26 7.48 Yes 62 -3.41 No 0 0 No -25 0.85 Yes 64 38.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68929298 + NM_133509 RAD51B 0 . . . 1.13 68.85 26 5 No 38 0.45 No 0 0 No -25 0.8 Yes 44 37.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68611709 + NM_133509 RAD51B 0 . . . 3.03 74.6 21 5.2 No 28 0.82 Yes 0 0 No -20 0.63 No 38 75.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68835836 + NM_004360 CDH1 0 . . . 5.02 74.25 22 5.29 No 67 0.42 No 0 0 No -22 0.73 Yes 49 88.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68637203 + NM_133509 RAD51B 0 . . . 0.82 57.82 18 4.9 No 10 1.43 Yes 0 0 No -35 0.61 No 41 44.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68864638 + NM_004360 CDH1 0 . . . 3.57 0 23 5.08 No 52 0.59 No 0 0 No -22 0.83 Yes 50 53.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47787169 + NM_000251 MSH2 0 . . . 2.78 0 31 5.32 No 72 -4.64 No 0 0 No -60 0.53 No 52 51.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32914344 + NM_000059 BRCA2 0 . . . 2.63 69.22 33 6.08 Yes 10 0.62 No 0 0 No -32 0.37 No 48 76.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29136529 - NM_001005735 CHEK2 0 . . . 5.96 69.41 19 5.64 Yes 62 0.53 No 0 0 No -25 0.57 No 48 65.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68564545 + NM_133509 RAD51B 0 . . . 4.36 80.02 43 5.01 No 72 1.32 Yes 0 0 No -26 0.69 Yes 40 62.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68470666 + NM_133509 RAD51B 0 . . . 2.18 67.58 17 4.8 No 7 0.6 No 0 0 No -23 0.37 No 40 54.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68772588 + NM_004360 CDH1 0 . . . 6.87 85.55 30 5.49 No 23 0.63 No 0 0 No -29 0.82 Yes 35 63.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131890887 + NM_005732 RAD50 0 . . . 3.07 0 21 5.86 Yes 30 1.96 Yes 0 0 No -30 0.3 No 28 85.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104170676 - NM_001100119 XRCC3 0 . . . 7.6 82.55 34 6.64 Yes 6 0.84 Yes 0 0 No -33 0.61 No 52 70.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68911464 + NM_133509 RAD51B 0 . . . 3.32 81.18 26 3.2 No 62 -2.66 No 0 0 No -28 0.42 No 63 62.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68824647 + NM_004360 CDH1 0 . . . 0.6 0 17 5.48 No 76 1.56 Yes 0 0 No -20 0.77 Yes 51 50.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41232562 - NM_007294 BRCA1 0 . . . 1.4 80.49 31 6.38 Yes 19 1.71 Yes 0 0 No -28 0.41 No 39 58.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68293376 + NM_133509 RAD51B 0 . . . 1.43 55.58 23 4.77 No 76 -4.75 No 0 0 No -22 0.57 No 42 45.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84390607 - NM_139076 FAM175A 0 . . . 2.28 65.4 34 5.98 Yes 59 0.3 No 0 0 No -33 0.86 Yes 42 55.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68611234 + NM_133509 RAD51B 0 . . . 1.12 67.78 39 7.62 Yes 62 -5.97 No 0 0 No -38 0.63 No 50 32.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37052056 + NM_000249 MLH1 0 . . . 1.34 0 36 6 Yes 58 0.25 No 0 0 No -22 0.37 No 43 71.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7569736 - NM_000546 TP53 0 . . . 3.09 84.11 18 6.21 Yes 68 1.49 Yes 0 0 No -36 0.42 No 47 97.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68504426 + NM_133509 RAD51B 0 . . . 7.17 77.08 22 4.8 No 18 -1.67 No 0 0 No -21 0.89 Yes 39 45.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90991122 - NM_002485 NBN 0 . . . 2.46 74.19 64 6.12 Yes 24 1.6 Yes 0 0 No -23 0.53 No 34 94.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59796655 - NM_032043 BRIP1 0 . . . 5.23 71.44 51 6.65 Yes 20 0.92 Yes 0 0 No -50 0.49 No 38 58.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47794303 + NM_000251 MSH2 0 . . . 6.68 79 15 5.52 No 45 -2.52 No 0 0 No -25 0.68 Yes 44 39.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32893656 + NM_000059 BRCA2 0 . . . 3.35 67.71 81 10.1 Yes 75 0.11 No 0 0 No -27 0.37 No 41 86.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32970736 + NM_000059 BRCA2 0 . . . 3.43 80.18 29 7.35 Yes 73 1.42 Yes 0 0 No -28 0.93 Yes 54 53.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47667178 + NM_000251 MSH2 0 . . . 4.77 75.18 14 5 No 68 0.33 No 0 0 No -40 0.64 No 46 63.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274390 - NM_007294 BRCA1 0 . . . 0.64 63.6 22 4.78 No 34 -3.12 No 0 0 No -51 0.6 No 24 65.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68318269 + NM_133509 RAD51B 0 . . . 5.47 77.34 28 5.2 No 20 -0.67 No 0 0 No -23 0.58 No 49 44.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47723043 + NM_000251 MSH2 0 . . . 3.04 68.28 21 5.2 No 41 0.66 No 0 0 No -20 0.58 No 51 64.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94199741 - NM_005591 MRE11 0 . . . 8.44 78.76 35 4.51 No 61 1.13 Yes 0 0 No -34 0.74 Yes 38 50.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215606806 - NM_000465 BARD1 0 . . . 2.17 70.85 27 4.91 No 40 0.8 Yes 0 0 No -27 0.52 No 38 84.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90990215 - NM_002485 NBN 0 . . . 2.05 70 26 4.22 No -2 0.45 No 0 0 No -25 0.9 Yes 49 41.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68635067 + NM_133509 RAD51B 0 . . . 0.86 64.59 26 5.39 No 40 0.31 No 0 0 No -27 0.49 No 18 60.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108168456 + NM_000051 ATM 0 . . . 0.94 59.83 37 6.47 Yes 34 0.41 No 0 0 No -29 0.6 No 35 73.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69125337 + NM_133509 RAD51B 0 . . . 6.49 81.34 31 5.66 Yes 49 1.11 Yes 0 0 No -30 0.51 No 55 28.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68536806 + NM_133509 RAD51B 0 . . . 1.37 77.21 21 4.23 No 49 0.76 No 0 0 No -20 0.81 Yes 37 88.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6048474 - NM_000535 PMS2 0 . . . 0.25 0 14 4.24 No -2 -0.28 No 0 0 No -19 0.69 Yes 55 40.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68921049 + NM_133509 RAD51B 0 . . . 0.03 63.43 33 6.24 Yes 75 0.7 No 0 0 No -32 0.86 Yes 38 33.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41278835 - NM_007294 BRCA1 0 . . . 1.37 77.08 23 5.29 No NA NA NA 0 0 No -25 0.61 No 34 89.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108181352 + NM_000051 ATM 0 . . . 1.28 68.57 15 5.27 No 39 0.06 No 0 0 No -32 0.66 Yes 18 59.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68494929 + NM_133509 RAD51B 0 . . . 7.42 84.58 14 5.39 No 24 0.87 Yes 0 0 No -46 0.58 No 34 97.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68860815 + NM_133509 RAD51B 0 . . . 8.6 86.02 38 5.48 No 11 0.8 Yes 0 0 No -29 0.55 No 47 69.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59919512 - NM_032043 BRIP1 0 . . . 8.51 90.71 26 5.66 Yes 13 1.8 Yes 0 0 No -25 0.77 Yes 45 81.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68539945 + NM_133509 RAD51B 0 . . . 5.14 71.99 34 5.9 Yes 49 -3.51 No 0 0 No -33 0.75 Yes 46 91.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29137508 - NM_001005735 CHEK2 0 . . . 5.18 84.11 50 5.42 No 73 0.09 No 0 0 No -32 0.94 Yes 47 78.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68354523 + NM_133509 RAD51B 0 . . . 0.4 68.63 43 6.63 Yes 34 0.1 No 0 0 No -42 0.37 No 24 47.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32888114 + NM_000059 BRCA2 0 . . . 0.32 72.76 17 6.08 Yes 74 0.3 No 0 0 No -16 0.62 No 50 48.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69061987 + NM_133509 RAD51B 0 . . . 6.38 0 17 5.56 Yes 65 -3.24 No 0 0 No -25 0.41 No 36 72.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59769771 - NM_032043 BRIP1 0 . . . 3.43 81.66 13 4.36 No 0 1.43 Yes 0 0 No -41 0.77 Yes 41 89.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68777938 + NM_133509 RAD51B 0 . . . 0.02 78.65 22 7.03 Yes 62 -4.01 No 0 0 No -21 0.71 Yes 47 31.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23654393 - NM_024675 PALB2 0 . . . 0.32 55.67 27 6.15 Yes -4 0.28 No 0 0 No -26 0.87 Yes 36 66.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68549042 + NM_133509 RAD51B 0 . . . 4.35 80.83 14 4.51 No 47 0.55 No 0 0 No -24 0.4 No 43 48.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23651636 - NM_024675 PALB2 0 . . . 3.09 77.41 16 5.09 No 8 -1.26 No 0 0 No -22 0.6 No 50 63.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29127691 - NM_001005735 CHEK2 0 . . . 5.07 74.11 21 4.89 No 74 -4.26 No 0 0 No -21 0.78 Yes 48 28.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75480948 - NM_001040108 MLH3 0 . . . 2.38 76.47 16 5.46 No 61 -5.3 No 0 0 No -26 0.89 Yes 48 47.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190668682 + NM_000534 PMS1 0 . . . 0.52 0 17 4.8 No 17 0.97 Yes 0 0 No -27 0.48 No 41 80.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59918601 - NM_032043 BRIP1 0 . . . 7.52 88.71 27 5.29 No 58 -0.9 No 0 0 No -26 0.93 Yes 42 61.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68668411 + NM_133509 RAD51B 0 . . . 5.26 89.62 17 4.8 No 28 -1.15 No 0 0 No -21 0.9 Yes 48 85.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190739592 + NM_000534 PMS1 0 . . . 0.81 70.87 15 4.58 No 3 -1.99 No 0 0 No -19 0.53 No 28 48.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68983389 + NM_133509 RAD51B 0 . . . 5.35 87.82 20 7.88 Yes 4 0.81 Yes 0 0 No -30 0.69 Yes 47 91.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59756487 - NM_032043 BRIP1 0 . . . 7.73 84.42 15 5.51 No -3 0.36 No 0 0 No -26 0.73 Yes 41 55.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56774989 + NM_058216 RAD51C 0 . . . 4.72 77.3 14 4.47 No 76 -6.02 No 0 0 No -29 0.17 No 47 71.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68833824 + NM_133509 RAD51B 0 . . . 6.22 81.9 14 4.47 No 64 1.27 Yes 0 0 No -19 0.47 No 48 71.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37067746 + NM_000249 MLH1 0 . . . 0.85 67.72 26 6 Yes 68 0.5 No 0 0 No -51 0.58 No 50 45.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1213634 + NM_000455 STK11 0 . . . 6.65 80.27 18 4.32 No 8 0.64 No 0 0 No -23 0.75 Yes 50 87.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69134543 + NM_133509 RAD51B 0 . . . 3.67 85.65 26 5.29 No 54 0.23 No 0 0 No -25 0.69 Yes 19 59.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69147579 + NM_133509 RAD51B 0 . . . 0.47 61.25 28 4.97 No 71 -4.96 No 0 0 No -27 0.7 Yes 52 50.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131895309 + NM_005732 RAD50 0 . . . 0.47 66.15 14 4.47 No 47 1.27 Yes 0 0 No -44 0.54 No 24 72.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215669151 - NM_000465 BARD1 0 . . . 9.29 87.1 25 6.34 Yes 5 1.18 Yes 0 0 No -25 0.62 No 49 68.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68853371 + NM_004360 CDH1 0 . . . 5.7 72.1 20 7.14 Yes 13 1.18 Yes 0 0 No -19 0.78 Yes 45 68.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68894615 + NM_133509 RAD51B 0 . . . 0.75 60.82 21 6.22 Yes 1 0.28 No 0 0 No -20 0.78 Yes 53 46.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32974041 + NM_000059 BRCA2 0 . . . 2.82 72.81 26 6.92 Yes 34 1.13 Yes 0 0 No -25 0.44 No 49 77.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37073060 + NM_000249 MLH1 0 . . . 3.3 78.69 27 5.76 Yes 14 1.02 Yes 0 0 No -26 0.96 Yes 44 66.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59867370 - NM_032043 BRIP1 0 . . . 0.43 68.49 21 5.08 No 76 -1.72 No 0 0 No -25 0.52 No 48 80.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68714814 + NM_133509 RAD51B 0 . . . 1.14 69.2 41 6.4 Yes -4 0.7 No 0 0 No -22 0.89 Yes 62 24.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41226040 - NM_007294 BRCA1 0 . . . 0.05 74.09 19 5.47 No 36 0.83 Yes 0 0 No -23 0.61 No 54 75.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29111073 - NM_001005735 CHEK2 0 . . . 2.88 74.9 31 7.18 Yes 73 0.68 No 0 0 No -30 0.61 No 50 61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68787582 + NM_004360 CDH1 0 . . . 4.48 85.18 14 4.47 No 10 1.15 Yes 0 0 No -46 0.53 No 48 88.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215634655 - NM_000465 BARD1 0 . . . 2.62 79.68 24 5.04 No 59 0.4 No 0 0 No -23 0.85 Yes 49 64.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89709443 + NM_000314 PTEN 0 . . . 3.29 71.51 27 4.22 No 26 1.43 Yes 0 0 No -26 0.59 No 36 72.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59809935 - NM_032043 BRIP1 0 . . . 3.39 72.27 21 4.22 No 74 0.4 No 0 0 No -18 0.79 Yes 47 59.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69010523 + NM_133509 RAD51B 0 . . . 2.6 79.74 17 6.52 Yes 34 -1.08 No 0 0 No -28 0.58 No 52 66.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56806790 + NM_058216 RAD51C 0 . . . 2 80.34 12 6.62 Yes 34 1.2 Yes 0 0 No -37 0.6 No 44 41.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131971744 + NM_005732 RAD50 0 . . . 2.85 75.55 19 4.83 No 43 0.87 Yes 0 0 No -18 0.66 Yes 15 51.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37089856 + NM_000249 MLH1 0 . . . 3.36 0 32 7.29 Yes -2 -1.89 No 0 0 No -31 0.47 No 43 58.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23628848 - NM_024675 PALB2 0 . . . 3.2 70.42 25 4.9 No 58 0.46 No 0 0 No -24 0.43 No 15 5.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89683816 + NM_000314 PTEN 0 . . . 3.4 72.67 35 6.78 Yes 27 1.47 Yes 0 0 No -34 0.33 No 31 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68602948 + NM_133509 RAD51B 0 . . . 3.77 85.55 14 4.22 No 29 0.41 No 0 0 No -24 0.46 No 42 73.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152363659 - NM_005431 XRCC2 0 . . . 2.43 0 25 5.98 Yes 70 0.42 No 0 0 No -24 0.72 Yes 46 42.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45800058 - NM_001048171 MUTYH 0 . . . 0.74 65.96 36 4.72 No -4 0.19 No 0 0 No -28 0.78 Yes 47 51.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105176248 + NM_021930 RINT1 0 . . . 7.99 81.45 24 6.39 Yes 75 1.05 Yes 0 0 No -23 0.83 Yes 40 71.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90947069 - NM_002485 NBN 0 . . . 1.47 0 22 4.58 No 21 0.55 No 0 0 No -21 0.44 No 33 79.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68420099 + NM_133509 RAD51B 0 . . . 0.91 78.05 28 5.03 No -2 0.78 Yes 0 0 No -27 0.7 Yes 47 72.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190691903 + NM_000534 PMS1 0 . . . 5.97 77.96 21 4.58 No 11 0.59 No 0 0 No -20 0.91 Yes 46 46.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105172553 + NM_021930 RINT1 0 . . . 5.03 76.07 28 5.54 No 13 0.82 Yes 0 0 No -27 0.88 Yes 45 85.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68301015 + NM_133509 RAD51B 0 . . . 4.11 75.93 21 5.72 Yes 65 0.58 No 0 0 No -20 0.86 Yes 44 64.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152368933 - NM_005431 XRCC2 0 . . . 4.78 84.6 36 5.89 Yes 33 1.22 Yes 0 0 No -25 0.61 No 46 83.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89694587 + NM_000314 PTEN 0 . . . 0.97 74.68 23 4.66 No 53 0.64 No 0 0 No -22 0.51 No 36 57.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69093622 + NM_133509 RAD51B 0 . . . 3.57 79.03 18 4.9 No 36 0.51 No 0 0 No -17 0.69 Yes 52 64.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68853767 + NM_004360 CDH1 0 . . . 1.23 69.29 29 5.33 No 41 1.34 Yes 0 0 No -28 0.86 Yes 45 48.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59863353 - NM_032043 BRIP1 0 . . . 6.97 78.39 14 4.95 No 30 0.05 No 0 0 No -25 0.61 No 44 62.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68856020 + NM_133509 RAD51B 0 . . . 8.9 75.8 16 7.78 Yes 21 1.59 Yes 0 0 No -19 0.52 No 34 71.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94219778 - NM_005591 MRE11 0 . . . 5.9 76.52 23 5.12 No 59 1.06 Yes 0 0 No -23 0.69 Yes 49 75.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84403980 - NM_139076 FAM175A 0 . . . 4.47 69.37 21 3.47 No 65 0.91 Yes 0 0 No -21 0.41 No 40 92.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68767163 + NM_133509 RAD51B 0 . . . 0.87 73 36 5.85 Yes 63 1.27 Yes 0 0 No -35 0.72 Yes 53 64.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47681053 + NM_000251 MSH2 0 . . . 2.37 80.59 10 3.98 No 74 0.74 No 0 0 No -39 0.62 No 47 70.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6023703 - NM_000535 PMS2 0 . . . 1.18 0 13 4.8 No 20 -1.59 No 0 0 No -28 0.39 No 47 68.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68978624 + NM_133509 RAD51B 0 . . . 6.48 81.85 17 5.71 Yes 18 1.16 Yes 0 0 No -26 0.65 No 44 78.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108158617 + NM_000051 ATM 0 . . . 7.31 78.58 29 5.66 Yes 9 1.02 Yes 0 0 No -28 0.71 Yes 49 62.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131957814 + NM_005732 RAD50 0 . . . 5.82 81.27 24 5.57 Yes 22 0.78 Yes 0 0 No -29 0.53 No 43 62.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68453469 + NM_133509 RAD51B 0 . . . 0.16 77.26 36 9.41 Yes 39 0.71 No 0 0 No -35 0.52 No 50 65.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47645210 + NM_000251 MSH2 0 . . . 0.87 70.99 16 4.01 No 66 -5.59 No 0 0 No -15 0.47 No 40 31.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891378 + NM_133509 RAD51B 0 . . . 9.74 84.39 19 6.52 Yes 36 1.96 Yes 0 0 No -19 0.74 Yes 22 61.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215600157 - NM_000465 BARD1 0 . . . 1.52 0 34 6.33 Yes 3 1.02 Yes 0 0 No -33 0.8 Yes 55 76.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33429572 - NM_002878 RAD51D 0 . . . 4.23 85.43 13 4.36 No 8 0.91 Yes 0 0 No -33 0.77 Yes 50 91.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59825464 - NM_032043 BRIP1 0 . . . 5.28 82.75 22 7.11 Yes 15 1.97 Yes 0 0 No -21 0.92 Yes 39 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68423367 + NM_133509 RAD51B 0 . . . 1.39 78.19 25 4.03 No 42 -2.58 No 0 0 No -19 0.43 No 51 61.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48012468 + NM_000179 MSH6 0 . . . 1.3 60.41 35 7.28 Yes 16 1.04 Yes 0 0 No -34 0.72 Yes 42 88.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68815038 + NM_004360 CDH1 0 . . . 7.71 78.88 19 4.8 No 19 2.04 Yes 0 0 No -18 0.78 Yes 39 82.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59859357 - NM_032043 BRIP1 0 . . . 6.43 85.6 14 6.12 Yes 25 0.46 No 0 0 No -31 0.6 No 47 83.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108218092 + NM_000051 ATM 0 . . . 0.29 0 11 5.87 Yes 69 -5.15 No 0 0 No -20 0.73 Yes 50 26.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68679204 + NM_133509 RAD51B 0 . . . 2.38 73.78 34 6.13 Yes 56 -3.3 No 0 0 No -34 0.53 No 41 46.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68930152 + NM_133509 RAD51B 0 . . . 3.64 76.94 27 5.2 No 50 -2.46 No 0 0 No -45 0.49 No 53 67.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68810887 + NM_133509 RAD51B 0 . . . 2.17 74.29 27 6.42 Yes 45 0.92 Yes 0 0 No -26 0.52 No 13 37.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68771594 + NM_004360 CDH1 0 . . . 4.2 0 14 4.52 No 48 -1.05 No 0 0 No -19 0.54 No 40 46.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47790070 + NM_000251 MSH2 0 . . . 3.63 76.03 22 5.29 No 65 -1.99 No 0 0 No -21 0.38 No 32 57.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68649977 + NM_133509 RAD51B 0 . . . 6.75 76.56 32 5.81 Yes 3 0.16 No 0 0 No -31 0.52 No 48 48.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69036507 + NM_133509 RAD51B 0 . . . 1.1 76.63 16 4.7 No 9 0.73 No 0 0 No -20 0.81 Yes 49 60.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89645337 + NM_000314 PTEN 0 . . . 5.46 76.25 33 4.05 No 20 0.62 No 0 0 No -19 0.78 Yes 46 80.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48032504 + NM_000179 MSH6 0 . . . 2.96 80.12 28 5.29 No 8 1.06 Yes 0 0 No -27 0.81 Yes 50 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84386576 - NM_139076 FAM175A 0 . . . 3.45 69.72 13 4.11 No 39 1.05 Yes 0 0 No -26 0.37 No 47 68.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21970484 - NM_000077 CDKN2A 0 . . . 1.84 73.51 17 5.53 No 38 0.97 Yes 25 0.81 Yes -25 0.71 Yes 20 97.38 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr2 47696861 + NM_000251 MSH2 0 . . . 2.61 68.59 17 5.74 Yes 14 1 Yes 0 0 No -26 0.31 No 44 94.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68776759 + NM_133509 RAD51B 0 . . . 4.41 84.5 19 5.56 Yes 9 0.05 No 0 0 No -18 0.85 Yes 49 74.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89723041 + NM_000314 PTEN 0 . . . 0.79 65.6 14 5.11 No 41 -2.02 No 0 0 No -26 0.79 Yes 49 53.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59910579 - NM_032043 BRIP1 0 . . . 4.25 79.34 23 5.74 Yes 6 0.9 Yes 0 0 No -22 0.39 No 52 56.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41232019 - NM_007294 BRCA1 0 . . . 2.96 79.88 24 4.16 No 56 -4.05 No 0 0 No -21 0.42 No 50 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89681144 + NM_000314 PTEN 0 . . . 4.09 81.44 25 6.56 Yes 34 1.12 Yes 0 0 No -24 0.7 Yes 49 38.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59852363 - NM_032043 BRIP1 0 . . . 6.63 81.57 36 10.32 Yes -3 0.71 No 0 0 No -35 0.86 Yes 38 86.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47771832 + NM_000251 MSH2 0 . . . 11.43 88.65 10 3.17 No 12 1.9 Yes 0 0 No -32 0.48 No 46 84.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68944850 + NM_133509 RAD51B 0 . . . 3.01 62.98 29 6.32 Yes 26 -3.07 No 0 0 No -28 0.93 Yes 47 44.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21984322 - NM_000077 CDKN2A 0 . . . 0.75 75.2 26 5.57 Yes -1 0.56 No 0 0 No -25 0.69 Yes 50 44.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137533 + NM_133509 RAD51B 0 . . . 5.11 82.88 25 4.9 No 61 -2.14 No 0 0 No -24 0.64 No 52 56.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6033189 - NM_000535 PMS2 0 . . . 6.99 85.01 36 5.65 Yes 72 0.97 Yes 0 0 No -25 0.81 Yes 48 79.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59825521 - NM_032043 BRIP1 0 . . . 5.01 83.11 17 5.53 No -3 0.68 No 0 0 No -28 0.68 Yes 49 39.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190691134 + NM_000534 PMS1 0 . . . 3.75 0 60 3.31 No 27 -2.01 No 0 0 No -30 0.34 No 46 19.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75501059 - NM_001040108 MLH3 0 . . . 1.05 66.82 47 7.28 Yes 75 0.7 No 0 0 No -46 0.4 No 50 51.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29127981 - NM_001005735 CHEK2 0 . . . 2.14 79.43 27 5.29 No 75 0.97 Yes 0 0 No -26 0.38 No 53 62.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68853248 + NM_133509 RAD51B 0 . . . 7.3 72.24 31 4.73 No 54 0.98 Yes 0 0 No -23 0.5 No 38 85.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69033768 + NM_133509 RAD51B 0 . . . 0.61 74.47 23 4.69 No 52 1.16 Yes 0 0 No -22 0.57 No 54 65.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68477563 + NM_133509 RAD51B 0 . . . 1.52 72.98 28 7.85 Yes 18 0.79 Yes 0 0 No -24 0.45 No 50 56.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68590976 + NM_133509 RAD51B 0 . . . 8.25 84.29 28 5.29 No 13 0.59 No 0 0 No -27 0.73 Yes 45 94.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68554309 + NM_133509 RAD51B 0 . . . 0.53 67.35 21 4.9 No 34 1.1 Yes 0 0 No -24 0.5 No 24 51.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69032987 + NM_133509 RAD51B 0 . . . 7.44 82.17 22 5.72 Yes 1 2.06 Yes 0 0 No -21 0.95 Yes 46 61.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68352416 + NM_133509 RAD51B 0 . . . 3.54 68.97 25 5 No -1 1.38 Yes 28 0.79 Yes -24 0.93 Yes 52 88.33 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68826549 + NM_133509 RAD51B 0 . . . 6.84 74.83 26 5.09 No 25 -1.56 No 0 0 No -26 0.5 No 42 45.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68847649 + NM_133509 RAD51B 0 . . . 1.91 66.23 34 5.74 Yes 40 1.15 Yes 0 0 No -26 0.55 No 47 43.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90994716 - NM_002485 NBN 0 . . . 1.27 0 24 5.2 No 10 0.94 Yes 0 0 No -23 0.48 No 44 70.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215597296 - NM_000465 BARD1 0 . . . 1.59 69.9 37 6.66 Yes 17 1.4 Yes 0 0 No -32 0.31 No 41 37.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68816211 + NM_133509 RAD51B 0 . . . 7.71 76.63 28 5.29 No 42 1.11 Yes 0 0 No -27 0.41 No 41 48.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69043783 + NM_133509 RAD51B 0 . . . 0.15 69.45 25 5.5 No 70 -2.54 No 0 0 No -28 0.86 Yes 42 75.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68961655 + NM_133509 RAD51B 0 . . . 1.64 0 25 5.19 No 74 -4.19 No 0 0 No -24 0.93 Yes 42 74.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90946533 - NM_002485 NBN 0 . . . 2.18 68.73 38 7.87 Yes 8 -2.2 No 0 0 No -37 0.77 Yes 46 48.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6044319 - NM_000535 PMS2 0 . . . 5.72 90.92 20 7.14 Yes 51 1.29 Yes 0 0 No -19 0.75 Yes 19 80.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32893365 + NM_000059 BRCA2 0 . . . 0.7 75.24 29 6.05 Yes 50 -3.36 No 0 0 No -28 0.47 No 45 40.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47687395 + NM_000251 MSH2 0 . . . 1.49 77.36 16 5.2 No 37 1.03 Yes 0 0 No -21 0.58 No 21 70.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68657552 + NM_133509 RAD51B 0 . . . 7.21 83.95 31 5.95 Yes 34 0.75 No 0 0 No -30 0.74 Yes 47 82.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89646334 + NM_000314 PTEN 0 . . . 2.95 74.34 27 5.2 No 6 1.2 Yes 0 0 No -48 0.74 Yes 47 35.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68787654 + NM_133509 RAD51B 0 . . . 3.68 72.96 24 5.13 No 20 0.03 No 0 0 No -31 0.34 No 38 65.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68695068 + NM_133509 RAD51B 0 . . . 1.44 65.5 33 7.83 Yes 76 0.58 No 0 0 No -32 0.68 Yes 46 89.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23615651 - NM_024675 PALB2 0 . . . 0.14 77.66 27 5 No 70 -2.64 No 0 0 No -26 0.95 Yes 47 90.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47690394 + NM_000251 MSH2 0 . . . 3.11 72.87 17 4.8 No 60 0.82 Yes 0 0 No -25 0.35 No 50 45.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41220910 - NM_007294 BRCA1 0 . . . 4.9 76.12 33 5.74 Yes 27 0.65 No 0 0 No -26 0.42 No 31 67.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207840 - NM_007294 BRCA1 0 . . . 3.58 71.09 21 7.2 Yes 49 1.31 Yes 0 0 No -20 0.81 Yes 34 55.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47697880 + NM_000251 MSH2 0 . . . 1.23 81.46 49 4.22 No 16 -2.12 No 0 0 No -24 0.73 Yes 46 78.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152354294 - NM_005431 XRCC2 0 . . . 3.57 84 26 5.08 No 2 1.48 Yes 0 0 No -25 0.81 Yes 27 66.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94207363 - NM_005591 MRE11 0 . . . 6.39 79.6 23 5.29 No 4 1.06 Yes 0 0 No -22 0.68 Yes 49 44.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89631061 + NM_000314 PTEN 0 . . . 2.64 70.16 32 5.92 Yes 61 1.43 Yes 0 0 No -32 0.66 Yes 51 65.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68451725 + NM_133509 RAD51B 0 . . . 5.81 78.46 18 5.39 No -4 0.41 No 0 0 No -17 0.54 No 46 77.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190705156 + NM_000534 PMS1 0 . . . 7.41 71.17 19 4.39 No 2 1.32 Yes 0 0 No -23 0.63 No 47 89.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68292768 + NM_133509 RAD51B 0 . . . 1.59 59.68 29 6.32 Yes 71 0.6 No 0 0 No -28 0.61 No 44 77.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215672074 - NM_000465 BARD1 0 . . . 5.13 79.77 28 4.83 No 19 0.68 No 0 0 No -27 0.45 No 39 60.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510290 - NM_001040108 MLH3 0 . . . 6.29 74.75 23 6.23 Yes 10 1.52 Yes 0 0 No -22 0.68 Yes 41 88.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131937871 + NM_005732 RAD50 0 . . . 5.21 87.08 25 7.06 Yes 49 -3.23 No 0 0 No -24 0.96 Yes 52 21.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68769385 + NM_133509 RAD51B 0 . . . 4.82 80.67 30 5.48 No 53 -3.22 No 0 0 No -29 0.64 No 50 89.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6030112 - NM_000535 PMS2 0 . . . 0.6 71.5 29 4.18 No 69 0.3 No 0 0 No -31 0.38 No 16 73.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47716302 + NM_000251 MSH2 0 . . . 1.85 68.12 14 5.07 No 16 0 No 0 0 No -21 0.46 No 34 61.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215659751 - NM_000465 BARD1 0 . . . 0.6 71.44 13 5.17 No 3 0.96 Yes 0 0 No -20 0.49 No 43 56.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59851606 - NM_032043 BRIP1 0 . . . 4.47 69.24 24 6.41 Yes 10 1.02 Yes 0 0 No -27 0.58 No 48 89.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69069420 + NM_133509 RAD51B 0 . . . 1.43 66.4 24 5.22 No 50 2.08 Yes 0 0 No -21 0.79 Yes 59 32.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68777867 + NM_004360 CDH1 0 . . . 1.03 0 24 6.57 Yes 71 1.33 Yes 0 0 No -23 0.87 Yes 45 87.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68649237 + NM_133509 RAD51B 0 . . . 2.39 70.34 29 5.29 No -4 0.66 No 0 0 No -28 0.65 No 17 42.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68785376 + NM_004360 CDH1 0 . . . 9.17 84.27 50 8.08 Yes 74 1.44 Yes 0 0 No -25 0.9 Yes 37 58.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47753930 + NM_000251 MSH2 0 . . . 2.65 66.81 26 5.14 No 47 -3.63 No 0 0 No -23 0.51 No 45 52.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41242522 - NM_007294 BRCA1 0 . . . 1.87 80.61 35 6.92 Yes 54 0.58 No 0 0 No -34 0.59 No 53 47.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68812772 + NM_133509 RAD51B 0 . . . 4.26 77.63 47 8.72 Yes -1 0.04 No 0 0 No -46 0.75 Yes 48 53.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47758763 + NM_000251 MSH2 0 . . . 1.48 0 27 5.74 Yes 24 -2.45 No 0 0 No -26 0.64 No 55 42.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68549020 + NM_133509 RAD51B 0 . . . 8.14 84.27 30 6 Yes 25 0.55 No 0 0 No -30 0.71 Yes 42 67.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23630917 - NM_024675 PALB2 0 . . . 4.25 68.07 33 5.77 Yes 33 0.59 No 0 0 No -32 0.71 Yes 45 57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32900091 + NM_000059 BRCA2 0 . . . 0.32 66.64 36 3.79 No 10 0.13 No 0 0 No -23 0.61 No 45 63.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68786039 + NM_004360 CDH1 0 . . . 2.58 78.03 38 7.28 Yes 7 1.16 Yes 0 0 No -37 0.7 Yes 51 82.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32951992 + NM_000059 BRCA2 0 . . . 2.73 62.94 22 5.51 No 11 0.62 No 0 0 No -21 0.78 Yes 39 74.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215611476 - NM_000465 BARD1 0 . . . 9.07 87.68 15 4.41 No 15 0.89 Yes 0 0 No -18 0.19 No 43 77.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68815679 + NM_004360 CDH1 0 . . . 2.66 72.34 14 4.9 No 52 0.88 Yes 0 0 No -21 0.6 No 46 63.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68804348 + NM_133509 RAD51B 0 . . . 7.51 83.41 29 5.92 Yes 6 0.13 No 0 0 No -28 0.75 Yes 37 85.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68300143 + NM_133509 RAD51B 0 . . . 1.86 64.5 28 5.66 Yes 59 0.43 No 0 0 No -27 0.82 Yes 41 72.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68473784 + NM_133509 RAD51B 0 . . . 3.34 71.7 15 4.26 No -3 0.75 No 0 0 No -14 0.42 No 20 64.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90959223 - NM_002485 NBN 0 . . . 2.62 72.74 55 6.84 Yes 61 2.38 Yes 0 0 No -25 0.74 Yes 48 65.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32910335 + NM_000059 BRCA2 0 . . . 4.63 77.85 14 4.04 No 73 0.56 No 0 0 No -40 0.82 Yes 48 51.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68439368 + NM_133509 RAD51B 0 . . . 1.51 65.09 16 5.03 No 14 0.44 No 0 0 No -20 0.65 No 43 47.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94192466 - NM_005591 MRE11 0 . . . 5.33 75.6 17 5.57 Yes 7 1.3 Yes 0 0 No -16 0.58 No 43 77.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37037433 + NM_000249 MLH1 0 . . . 1.96 76.85 21 4.08 No 33 1.31 Yes 0 0 No -18 0.58 No 50 64.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105194531 + NM_021930 RINT1 0 . . . 3.25 80.12 25 5.42 No 8 1.2 Yes 0 0 No -24 0.75 Yes 50 83.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89674030 + NM_000314 PTEN 0 . . . 7.08 86.79 15 4.79 No 58 0.81 Yes 0 0 No -28 0.52 No 41 72.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69110434 + NM_133509 RAD51B 0 . . . 0.38 71.28 16 5.17 No 0 0.2 No 0 0 No -56 0.65 No 36 86.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68720948 + NM_133509 RAD51B 0 . . . 5.12 75.7 18 4.9 No 20 0.66 No 0 0 No -17 0.6 No 38 69.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849706 - NM_032043 BRIP1 0 . . . 4.34 77.1 19 5 No 64 1.05 Yes 0 0 No -23 0.35 No 36 75.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47793059 + NM_000251 MSH2 0 . . . 3.86 70.89 36 5.72 Yes 1 1.16 Yes 0 0 No -28 0.76 Yes 50 51.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68535792 + NM_133509 RAD51B 0 . . . 2.61 77.74 21 8.44 Yes 13 0.79 Yes 0 0 No -20 0.48 No 45 69.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68777010 + NM_004360 CDH1 0 . . . 9.75 96.53 17 5.48 No 75 -0.5 No 0 0 No -16 0.46 No 45 89.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41194585 - NM_007294 BRCA1 0 . . . 5.09 68.11 24 5.92 Yes 30 1.52 Yes 0 0 No -23 0.85 Yes 33 83.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32971963 + NM_000059 BRCA2 0 . . . 1.62 76.47 22 5.83 Yes 59 -4.26 No 0 0 No -22 0.69 Yes 45 35.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68866603 + NM_004360 CDH1 0 . . . 3.37 68.3 39 6.36 Yes 47 0.65 No 0 0 No -24 0.57 No 43 54.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68821052 + NM_133509 RAD51B 0 . . . 2.22 87 96 11.06 Yes 33 1.16 Yes 0 0 No -31 0.41 No 25 48.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37057018 + NM_000249 MLH1 0 . . . 0.36 69.07 20 4 No -1 1.38 Yes 0 0 No -25 0.65 No 39 57.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90961377 - NM_002485 NBN 0 . . . 5.02 73.22 15 4.84 No 5 2.03 Yes 0 0 No -24 0.74 Yes 53 68.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47701167 + NM_000251 MSH2 0 . . . 6.2 72.9 27 5.1 No -4 0.45 No 0 0 No -27 0.55 No 45 51.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37073907 + NM_000249 MLH1 0 . . . 10.16 94.5 12 4.6 No 5 1.57 Yes 0 0 No -21 0.39 No 46 48.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47710971 + NM_000251 MSH2 0 . . . 4.15 74.05 34 3.79 No 53 0.31 No 0 0 No -27 0.29 No 42 39.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68617749 + NM_133509 RAD51B 0 . . . 6.76 83.82 24 5.48 No 5 1.03 Yes 0 0 No -23 0.45 No 40 85.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190707906 + NM_000534 PMS1 0 . . . 0.85 68.06 22 6.85 Yes 47 0.65 No 0 0 No -21 0.95 Yes 48 52.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90944353 - NM_002485 NBN 0 . . . 4.58 82.7 17 5.57 Yes 63 0.81 Yes 0 0 No -16 0.72 Yes 50 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59869768 - NM_032043 BRIP1 0 . . . 3.4 80.45 12 5.1 No -1 1.05 Yes 0 0 No -41 0.48 No 47 72.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47723296 + NM_000251 MSH2 0 . . . 0.14 73.2 33 5.83 Yes 38 1.21 Yes 0 0 No -32 0.78 Yes 20 45.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94195812 - NM_005591 MRE11 0 . . . 0.3 0 26 4.83 No 36 0.59 No 0 0 No -30 0.43 No 22 80.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68762238 + NM_133509 RAD51B 0 . . . 6.19 86.46 18 5.39 No 42 1.84 Yes 0 0 No -33 0.61 No 48 65.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56808428 + NM_058216 RAD51C 0 . . . 2.55 78.17 22 5.75 Yes 12 1.1 Yes 0 0 No -25 0.94 Yes 46 86.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40990012 + NM_001164269 RAD51 0 . . . 3.42 70.85 31 5.89 Yes 21 1.7 Yes 0 0 No -30 0.77 Yes 37 77.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32971289 + NM_000059 BRCA2 0 . . . 1.5 64.71 21 4.8 No 68 -2.6 No 0 0 No -20 0.86 Yes 42 49.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104176200 - NM_001100119 XRCC3 0 . . . 0.24 0 21 5.09 No 57 2.22 Yes 0 0 No -20 0.83 Yes 54 63.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75502299 - NM_001040108 MLH3 0 . . . 0.31 67.53 18 5.59 Yes 63 0.34 No 0 0 No -18 0.5 No 51 34.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59912111 - NM_032043 BRIP1 0 . . . 5.91 76.77 32 4.88 No -3 0.15 No 0 0 No -28 0.42 No 43 55.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89713043 + NM_000314 PTEN 0 . . . 6.46 79.61 21 8.88 Yes 3 1.29 Yes 0 0 No -20 0.69 Yes 55 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69033988 + NM_133509 RAD51B 0 . . . 1.2 76.63 16 5.19 No 59 -3.94 No 0 0 No -26 0.38 No 47 32.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215598725 - NM_000465 BARD1 0 . . . 6.69 84.83 44 8 Yes 76 -2.52 No 0 0 No -43 0.78 Yes 37 32.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47651687 + NM_000251 MSH2 0 . . . 2.6 85.02 32 7.41 Yes 76 1.54 Yes 0 0 No -31 0.8 Yes 53 88.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68809533 + NM_133509 RAD51B 0 . . . 5.26 70.53 27 3.79 No 54 0.68 No 0 0 No -26 0.67 Yes 41 81.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69073646 + NM_133509 RAD51B 0 . . . 1.51 72.01 17 5.36 No 76 2.01 Yes 0 0 No -22 0.62 No 41 70.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89669270 + NM_000314 PTEN 0 . . . 5.8 78.77 16 4.69 No 38 0.97 Yes 0 0 No -35 0.52 No 20 93.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47727969 + NM_000251 MSH2 0 . . . 6.31 86.67 41 6.3 Yes 47 1.44 Yes 0 0 No -38 0.5 No 11 82.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94200606 - NM_005591 MRE11 0 . . . 7.83 81.82 29 6.2 Yes 26 0.62 No 0 0 No -33 0.77 Yes 42 75.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47750447 + NM_000251 MSH2 0 . . . 4.68 80.34 37 6.55 Yes 29 0.05 No 0 0 No -36 0.77 Yes 45 70.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41004999 + NM_001164269 RAD51 0 . . . 4.37 77.39 23 5.37 No 11 0.51 No 0 0 No -22 0.79 Yes 47 60.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69053189 + NM_133509 RAD51B 0 . . . 5.26 74.61 21 5.07 No 13 1.15 Yes 0 0 No -20 0.53 No 45 90.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190739373 + NM_000534 PMS1 0 . . . 6.85 92.78 25 6.13 Yes 34 1.38 Yes 0 0 No -24 0.84 Yes 46 62.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68690074 + NM_133509 RAD51B 0 . . . 3.53 73.28 16 5.29 No 9 0.74 No 0 0 No -21 0.55 No 49 90.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68703829 + NM_133509 RAD51B 0 . . . 2.79 75.12 16 5.47 No 59 1.18 Yes 0 0 No -27 0.81 Yes 40 84.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68619370 + NM_133509 RAD51B 0 . . . 5.21 86.35 12 4.91 No 43 1.19 Yes 0 0 No -12 0.32 No 49 85.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29097699 - NM_001005735 CHEK2 0 . . . 1 0 20 4.84 No 21 0.42 No 0 0 No -49 0.52 No 47 78.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84380272 - NM_139076 FAM175A 0 . . . 5.94 90.14 15 5.13 No 13 0.74 No 0 0 No -24 0.7 Yes 45 80.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69040063 + NM_133509 RAD51B 0 . . . 6.48 87.62 21 5.8 Yes 0 0.93 Yes 0 0 No -29 0.69 Yes 46 86.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131936450 + NM_005732 RAD50 0 . . . 4.1 71.91 29 4.1 No 38 0.54 No 0 0 No -28 0.48 No 44 53.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69066258 + NM_133509 RAD51B 0 . . . 2.88 61.75 39 7.46 Yes 14 0.5 No 0 0 No -38 0.48 No 43 79.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33439738 - NM_002878 RAD51D 0 . . . 5.46 83.65 18 4.34 No 62 -3.16 No 0 0 No -17 0.66 No 43 38.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108150118 + NM_000051 ATM 0 . . . 7.26 84.83 25 5 No 38 0.22 No 0 0 No -24 0.8 Yes 51 59.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89666860 + NM_000314 PTEN 0 . . . 0.01 60.1 32 5.74 Yes 19 -3.39 No 0 0 No -26 0.69 Yes 57 29.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75479429 - NM_001040108 MLH3 0 . . . 5.4 79.47 31 4.24 No 22 0.48 No 0 0 No -30 0.7 Yes 39 57.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68702044 + NM_133509 RAD51B 0 . . . 0.37 67.4 17 4.05 No 34 -2.88 No 0 0 No -23 0.94 Yes 42 48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68306336 + NM_133509 RAD51B 0 . . . 5.21 78.3 30 5.96 Yes 72 1.59 Yes 0 0 No -29 0.69 Yes 46 76.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68417213 + NM_133509 RAD51B 0 . . . 1.92 79.26 22 4.8 No 22 -1.04 No 0 0 No -20 0.29 No 51 57.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68393857 + NM_133509 RAD51B 0 . . . 3.61 74.51 22 6.05 Yes 3 0.34 No 0 0 No -22 0.25 No 48 72.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68863183 + NM_133509 RAD51B 0 . . . 0.7 67.24 22 4.69 No 76 1.31 Yes 0 0 No -21 0.97 Yes 43 44.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68867365 + NM_133509 RAD51B 0 . . . 1.4 73.76 28 5.83 Yes 67 -3.29 No 0 0 No -27 0.87 Yes 51 39.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108118097 + NM_000051 ATM 0 . . . 8.08 78.64 16 4.54 No 25 0.98 Yes 0 0 No -20 0.7 Yes 33 94.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59881301 - NM_032043 BRIP1 0 . . . 5.14 73.74 20 5.07 No 1 0.88 Yes 0 0 No -22 0.64 No 42 47.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215628372 - NM_000465 BARD1 0 . . . 1.36 75.55 18 4.69 No 5 1.19 Yes 0 0 No -20 0.32 No 43 53.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84398883 - NM_139076 FAM175A 0 . . . 7.66 80.43 34 5.38 No 53 0.68 No 0 0 No -24 0.62 No 50 56.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190734153 + NM_000534 PMS1 0 . . . 1.05 70.38 26 6.36 Yes 70 0.5 No 0 0 No -23 0.59 No 47 58.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94167269 - NM_005591 MRE11 0 . . . 6.36 91.34 31 5.44 No 15 0.77 Yes 0 0 No -30 0.72 Yes 43 78.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68482188 + NM_133509 RAD51B 0 . . . 1.98 72.47 20 5.09 No 44 -3.73 No 0 0 No -29 0.72 Yes 58 29.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90995458 - NM_002485 NBN 0 . . . 5.77 73.81 28 4.41 No 36 1.26 Yes 0 0 No -20 0.53 No 45 43.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68850352 + NM_133509 RAD51B 0 . . . 3.48 80.69 15 4.58 No 24 0.77 No 0 0 No -25 0.43 No 47 74.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23641017 - NM_024675 PALB2 0 . . . 3.91 78 25 3.76 No 39 1.44 Yes 0 0 No -25 0.87 Yes 48 81.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68752693 + NM_133509 RAD51B 0 . . . 2.43 66.43 15 5.37 No 49 1.07 Yes 0 0 No -59 0.36 No 43 80.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68815368 + NM_133509 RAD51B 0 . . . 0.09 74.68 19 6.08 Yes 31 1.42 Yes 0 0 No -25 0.58 No 21 73.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94152552 - NM_005591 MRE11 0 . . . 2.19 0 20 4.88 No 14 -1.5 No 0 0 No -19 0.91 Yes 44 24.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89724669 + NM_000314 PTEN 0 . . . 3.2 70.29 14 5.9 Yes 46 0.41 No 0 0 No -27 0.79 Yes 42 48.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47697384 + NM_000251 MSH2 0 . . . 6.24 82.31 18 4.22 No 57 1.49 Yes 0 0 No -17 0.54 No 55 55.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6026617 - NM_000535 PMS2 0 . . . 1.9 66.15 22 4.69 No 2 0.52 No 0 0 No -21 0.89 Yes 49 44.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89703086 + NM_000314 PTEN 0 . . . 1 74.81 29 6.23 Yes 75 -5.38 No 0 0 No -28 0.81 Yes 51 61.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89626997 + NM_000314 PTEN 0 . . . 1.93 73.97 25 5.53 No 3 0.43 No 0 0 No -24 0.88 Yes 45 53.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68597257 + NM_133509 RAD51B 0 . . . 4.76 79.81 58 8.02 Yes 41 0.3 No 0 0 No -30 0.78 Yes 33 66.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47744583 + NM_000251 MSH2 0 . . . 1.1 67.22 14 4.29 No 29 -2.32 No 0 0 No -13 0.59 No 41 89.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68735756 + NM_133509 RAD51B 0 . . . 2.04 77.32 67 9.04 Yes 71 0.44 No 0 0 No -32 0.43 No 50 74.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23621922 - NM_024675 PALB2 0 . . . 3.29 81.68 22 5.1 No 71 -6.51 No 0 0 No -21 0.89 Yes 49 88.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29092216 - NM_001005735 CHEK2 0 . . . 3.51 0 15 5.04 No 57 0.46 No 0 0 No -19 0.36 No 46 56.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68513809 + NM_133509 RAD51B 0 . . . 5.68 85.32 33 6.69 Yes 48 0.81 Yes 0 0 No -29 0.47 No 47 59.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29083421 - NM_001005735 CHEK2 0 . . . 1.1 0 17 5.51 No 23 1.64 Yes 0 0 No -29 0.62 No 35 74.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68657518 + NM_133509 RAD51B 0 . . . 2.13 75.81 48 8.26 Yes 75 1.96 Yes 0 0 No -47 0.51 No 46 69.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104182629 - NM_001100119 XRCC3 0 . . . 1.66 75.54 42 6.06 Yes NA NA NA 0 0 No -41 0.47 No 51 26.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1204596 + NM_000455 STK11 0 . . . 7.06 81.51 29 4.46 No 11 1.13 Yes 0 0 No -28 0.61 No 47 73.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94171676 - NM_005591 MRE11 0 . . . 5.78 86.88 58 5.97 Yes 37 0.68 No 0 0 No -26 0.24 No 43 61.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56771216 + NM_058216 RAD51C 0 . . . 2.22 77 14 5.29 No 74 -4.86 No 0 0 No -21 0.58 No 45 53.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41242883 - NM_007294 BRCA1 0 . . . 7.26 77.9 50 7.48 Yes 76 -2.13 No 0 0 No -50 0.61 No 45 84.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108170105 + NM_000051 ATM 0 . . . 5.51 81.57 36 6.92 Yes 63 1.4 Yes 0 0 No -29 0.56 No 44 68.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69012988 + NM_133509 RAD51B 0 . . . 0.11 65.22 41 6.3 Yes 18 -1.26 No 0 0 No -36 0.86 Yes 48 58.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190716318 + NM_000534 PMS1 0 . . . 4 80.17 68 8.1 Yes 17 1.37 Yes 0 0 No -28 0.44 No 45 84.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23626892 - NM_024675 PALB2 0 . . . 1.43 74.23 19 5 No 49 0.61 No 0 0 No -24 0.34 No 46 63.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37081505 + NM_000249 MLH1 0 . . . 3.85 68.36 25 5 No 64 1.04 Yes 0 0 No -21 0.58 No 37 56.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68786191 + NM_004360 CDH1 0 . . . 3.23 74.19 16 4.77 No 2 0.83 Yes 0 0 No -21 0.49 No 47 95.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68707496 + NM_133509 RAD51B 0 . . . 6.62 79.73 22 5.14 No 36 1.22 Yes 0 0 No -21 0.51 No 44 73.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59916329 - NM_032043 BRIP1 0 . . . 2.78 0 10 4 No 57 1.33 Yes 0 0 No -32 0.69 Yes 39 61.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47716373 + NM_000251 MSH2 0 . . . 1.11 72.25 11 4.12 No 50 -4.92 No 0 0 No -26 0.71 Yes 43 49.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68527806 + NM_133509 RAD51B 0 . . . 2.56 83.78 29 5.57 Yes 69 0.87 Yes 0 0 No -28 0.84 Yes 29 79.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69122934 + NM_133509 RAD51B 0 . . . 3.67 79.15 43 7.1 Yes -3 0.97 Yes 0 0 No -24 0.87 Yes 36 77.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190665861 + NM_000534 PMS1 0 . . . 3.38 77.54 25 6.22 Yes 64 1.53 Yes 0 0 No -24 0.85 Yes 49 59.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47790386 + NM_000251 MSH2 0 . . . 7.41 84.13 49 6.72 Yes 29 1.34 Yes 0 0 No -35 0.83 Yes 48 78.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41232586 - NM_007294 BRCA1 0 . . . 0.9 82.74 15 4.58 No 8 0.56 No 0 0 No -48 0.51 No 50 88.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68955336 + NM_133509 RAD51B 0 . . . 0.81 0 28 5.57 Yes 41 1.1 Yes 0 0 No -27 0.95 Yes 43 50.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37076545 + NM_000249 MLH1 0 . . . 2.31 80.72 16 4.58 No 68 -1.76 No 0 0 No -25 0.57 No 53 45.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190708189 + NM_000534 PMS1 0 . . . 0.81 66.15 33 6 Yes 50 0.81 Yes 0 0 No -26 0.58 No 46 81.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68828646 + NM_133509 RAD51B 0 . . . 1.17 80.65 33 5.3 No 13 1.55 Yes 0 0 No -24 0.43 No 45 71.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6009566 - NM_000535 PMS2 0 . . . 3.4 76.63 26 5.64 Yes 74 -4.64 No 0 0 No -25 0.76 Yes 48 54.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68778607 + NM_004360 CDH1 0 . . . 3.21 0 20 5.1 No 2 0.25 No 0 0 No -22 0.23 No 41 71.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68329976 + NM_133509 RAD51B 0 . . . 2.37 83.63 33 6.89 Yes 18 0.72 No 0 0 No -32 0.44 No 35 82.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68512560 + NM_133509 RAD51B 0 . . . 5.12 78.81 21 4.8 No 3 0.91 Yes 0 0 No -20 0.69 Yes 47 63.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29118360 - NM_001005735 CHEK2 0 . . . 3.25 80.12 22 4.83 No 8 1.2 Yes 0 0 No -21 0.85 Yes 50 91.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47682173 + NM_000251 MSH2 0 . . . 3.51 69.24 35 6.16 Yes 10 0.79 Yes 0 0 No -23 0.55 No 48 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40987153 + NM_001164269 RAD51 0 . . . 3.85 70.86 29 5.29 No 20 0.53 No 0 0 No -28 0.83 Yes 38 92.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47731782 + NM_000251 MSH2 0 . . . 4.51 84.52 17 4.8 No 71 -3.99 No 0 0 No -19 0.57 No 34 84.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108226179 + NM_000051 ATM 0 . . . 2.11 0 34 6.81 Yes 22 0.3 No 0 0 No -29 0.69 Yes 36 76.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41225818 - NM_007294 BRCA1 0 . . . 1.25 76.04 26 6.04 Yes 58 -3.87 No 0 0 No -26 0.72 Yes 53 54.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59760986 - NM_032043 BRIP1 0 . . . 3.54 75.59 18 4.9 No 27 0.09 No 0 0 No -17 0.43 No 45 51.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104171269 - NM_001100119 XRCC3 0 . . . 5.61 83.25 19 4.58 No 37 0.06 No 0 0 No -18 0.84 Yes 50 52.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190737045 + NM_000534 PMS1 0 . . . 2.28 69.65 17 5.66 Yes 15 -2.37 No 0 0 No -16 0.66 No 59 44.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68689679 + NM_133509 RAD51B 0 . . . 6.21 85.92 21 4.68 No 13 1.57 Yes 0 0 No -20 0.95 Yes 52 59.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152351255 - NM_005431 XRCC2 0 . . . 4.32 87.32 43 6.48 Yes 66 1.38 Yes 0 0 No -24 0.84 Yes 19 64.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6024151 - NM_000535 PMS2 0 . . . 4.21 75.27 17 4.79 No 32 0.77 Yes 0 0 No -35 0.51 No 21 63.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69147152 + NM_133509 RAD51B 0 . . . 2.02 70.75 13 4.24 No 0 1.22 Yes 0 0 No -39 0.28 No 42 30.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94165454 - NM_005591 MRE11 0 . . . 6.08 79.26 16 4.68 No 40 -4.16 No 0 0 No -40 0.86 Yes 46 59.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32937971 + NM_000059 BRCA2 0 . . . 5.01 84.97 23 4.78 No 7 0.73 No 0 0 No -22 0.95 Yes 51 95.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47642919 + NM_000251 MSH2 0 . . . 6.18 77.37 31 5.82 Yes -3 0.28 No 0 0 No -30 0.82 Yes 45 89.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59843712 - NM_032043 BRIP1 0 . . . 4.65 89.11 27 5.2 No 53 -5.06 No 0 0 No -51 0.81 Yes 50 72.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37054563 + NM_000249 MLH1 0 . . . 2.09 70.57 42 4.26 No 52 1.16 Yes 0 0 No -27 0.94 Yes 48 85.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94184258 - NM_005591 MRE11 0 . . . 2.12 84.78 16 4.27 No 37 1.2 Yes 0 0 No -21 0.55 No 21 94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89714907 + NM_000314 PTEN 0 . . . 3.47 74.12 41 6.78 Yes 65 -2.85 No 0 0 No -27 0.48 No 49 72.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6031582 - NM_000535 PMS2 0 . . . 1.88 78.01 19 7.04 Yes 28 0.9 Yes 0 0 No -18 0.48 No 46 90.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47694714 + NM_000251 MSH2 0 . . . 0.05 0 26 5.65 Yes 9 1.42 Yes 0 0 No -25 0.93 Yes 49 41.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90992544 - NM_002485 NBN 0 . . . 8.7 89.27 28 6.7 Yes 48 1.14 Yes 0 0 No -31 0.63 No 45 61.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59913053 - NM_032043 BRIP1 0 . . . 7.8 91.96 21 5.2 No 6 0.59 No 0 0 No -20 0.69 Yes 35 76.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68837247 + NM_133509 RAD51B 0 . . . 0.06 0 14 4.47 No -3 0.84 Yes 0 0 No -21 0.39 No 61 49.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37057108 + NM_000249 MLH1 0 . . . 2.96 76.75 50 6.28 Yes 39 0.15 No 0 0 No -32 0.78 Yes 51 91.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68789276 + NM_004360 CDH1 0 . . . 0.19 62.69 31 5.5 No 15 0.14 No 0 0 No -25 0.42 No 39 85.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69106137 + NM_133509 RAD51B 0 . . . 0.08 74.38 15 4.47 No 73 -2.85 No 0 0 No -18 0.42 No 48 47.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90949770 - NM_002485 NBN 0 . . . 2.67 81.14 19 5.61 Yes 39 0.5 No 0 0 No -26 0.38 No 50 77.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75511932 - NM_001040108 MLH3 0 . . . 0.1 81.72 16 5.29 No 27 1.4 Yes 0 0 No -21 0.5 No 50 44.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47720139 + NM_000251 MSH2 0 . . . 5.22 76.79 29 4.19 No 48 0.41 No 0 0 No -28 0.47 No 48 85.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59784558 - NM_032043 BRIP1 0 . . . 9.09 76.2 26 7.19 Yes 61 -3.94 No 0 0 No -25 0.67 Yes 43 41.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48029131 + NM_000179 MSH6 0 . . . 2.19 0 32 4.92 No 54 0.32 No 0 0 No -27 0.84 Yes 49 86.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105208230 + NM_021930 RINT1 0 . . . 1.89 74.68 18 3.54 No 44 0.97 Yes 0 0 No -27 0.87 Yes 54 78.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29137479 - NM_001005735 CHEK2 0 . . . 4.12 66.58 27 6.45 Yes 19 -2.99 No 0 0 No -26 0.47 No 50 84.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68651672 + NM_133509 RAD51B 0 . . . 9.55 86.66 24 5.2 No 51 0.55 No 0 0 No -23 0.81 Yes 40 78.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68440550 + NM_133509 RAD51B 0 . . . 3.9 73.1 24 4.45 No 64 -5.05 No 0 0 No -19 0.48 No 46 48.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215629073 - NM_000465 BARD1 0 . . . 1.28 0 30 7.08 Yes 13 1.32 Yes 0 0 No -30 0.55 No 45 88.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89632465 + NM_000314 PTEN 0 . . . 4.5 86.37 29 5.48 No 53 1.11 Yes 0 0 No -28 0.94 Yes 52 62.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94210753 - NM_005591 MRE11 0 . . . 4.47 69.1 14 4.9 No 57 1.33 Yes 0 0 No -56 0.87 Yes 40 85.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68759849 + NM_133509 RAD51B 0 . . . 0.09 0 53 7.03 Yes 25 0.72 No 0 0 No -28 0.49 No 33 32.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69091153 + NM_133509 RAD51B 0 . . . 3 75.45 25 4.54 No 55 -3.67 No 0 0 No -23 0.48 No 53 60.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59921165 - NM_032043 BRIP1 0 . . . 2.93 65.13 24 5.09 No 13 0.49 No 0 0 No -23 0.91 Yes 45 82.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131902726 + NM_005732 RAD50 0 . . . 6.33 75.2 26 4.41 No 10 1.1 Yes 0 0 No -25 0.75 Yes 43 77.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68794607 + NM_133509 RAD51B 0 . . . 4.56 0 36 5.04 No 60 -4.43 No 0 0 No -21 0.69 Yes 47 77.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68765777 + NM_133509 RAD51B 0 . . . 1.46 73.3 21 4.74 No 25 1.29 Yes 0 0 No -20 0.67 Yes 33 78.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68686244 + NM_133509 RAD51B 0 . . . 0.66 0 54 8 Yes 73 0.6 No 0 0 No -21 0.58 No 54 66.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32954078 + NM_000059 BRCA2 0 . . . 8.88 85.62 31 5.86 Yes -3 0.75 No 0 0 No -30 0.63 No 47 45.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59865129 - NM_032043 BRIP1 0 . . . 2.39 83.53 25 5.57 Yes 70 1.21 Yes 0 0 No -25 0.73 Yes 28 27.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29119174 - NM_001005735 CHEK2 0 . . . 0.3 0 34 6.78 Yes 62 0.76 No 0 0 No -33 0.86 Yes 56 37.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105202856 + NM_021930 RINT1 0 . . . 1.26 68.06 18 4.92 No 73 1.11 Yes 0 0 No -20 0.63 No 37 20.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68652004 + NM_133509 RAD51B 0 . . . 0.07 61.92 22 4.74 No 61 -5.4 No 0 0 No -21 0.91 Yes 44 70.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68852003 + NM_133509 RAD51B 0 . . . 2.57 71.62 28 5.36 No 16 0.22 No 0 0 No -27 0.77 Yes 36 67.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68988725 + NM_133509 RAD51B 0 . . . 0.24 73.73 30 6.78 Yes 5 0.8 Yes 0 0 No -29 0.83 Yes 38 85.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108240730 + NM_000051 ATM 0 . . . 7.12 77.2 27 5.1 No 9 1.64 Yes 0 0 No -26 0.82 Yes 49 84.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90985434 - NM_002485 NBN 0 . . . 4.01 78.09 56 6.81 Yes 27 0.75 No 0 0 No -24 0.73 Yes 41 57.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68979366 + NM_133509 RAD51B 0 . . . 1.21 62.69 58 8.76 Yes 71 1.34 Yes 0 0 No -25 0.6 No 33 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32972774 + NM_000059 BRCA2 0 . . . 2.36 77.09 61 9.16 Yes 13 0.02 No 0 0 No -27 0.53 No 50 48.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68357115 + NM_133509 RAD51B 0 . . . 7.94 91.97 23 5 No 22 -1.47 No 0 0 No -22 0.48 No 43 68.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69027755 + NM_133509 RAD51B 0 . . . 2.52 89.4 19 5 No 55 -1.85 No 0 0 No -18 0.85 Yes 54 63.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108226131 + NM_000051 ATM 0 . . . 3.4 82.35 21 4.81 No 48 0.41 No 0 0 No -20 0.96 Yes 45 53.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59757067 - NM_032043 BRIP1 0 . . . 1.57 74.83 25 6.48 Yes 43 0.82 Yes 0 0 No -24 0.91 Yes 41 55.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68459783 + NM_133509 RAD51B 0 . . . 2.43 71.31 13 3.99 No 40 2.03 Yes 0 0 No -26 0.48 No 41 86.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69001164 + NM_133509 RAD51B 0 . . . 5.62 81.68 11 4.8 No 66 -4.96 No 0 0 No -30 0.35 No 53 51.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69091674 + NM_133509 RAD51B 0 . . . 1.73 81.57 28 5.62 Yes 5 0.18 No 0 0 No -27 0.81 Yes 53 76.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32952728 + NM_000059 BRCA2 0 . . . 7.67 76.99 28 5.38 No 5 0.46 No 0 0 No -27 0.85 Yes 43 71.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90973566 - NM_002485 NBN 0 . . . 3.64 74.37 19 4.36 No 61 0.87 Yes 0 0 No -34 0.42 No 51 66.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84395486 - NM_139076 FAM175A 0 . . . 1.47 74.17 16 5.19 No 6 0.82 Yes 0 0 No -20 0.61 No 44 56.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41199163 - NM_007294 BRCA1 0 . . . 2.08 77.69 15 4.47 No 58 -4.14 No 0 0 No -61 0.69 Yes 47 58.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59922571 - NM_032043 BRIP1 0 . . . 1.31 76.35 25 5.79 Yes 33 0.18 No 0 0 No -34 0.58 No 49 78.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21987073 - NM_000077 CDKN2A 0 . . . 7.32 80.12 18 6.63 Yes 8 0.67 No 0 0 No -37 0.49 No 45 44.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68817790 + NM_004360 CDH1 0 . . . 0.27 74.73 17 5.29 No 33 1.16 Yes 0 0 No -16 0.51 No 25 51.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84399907 - NM_139076 FAM175A 0 . . . 7.89 77.14 19 4.29 No 17 1.24 Yes 0 0 No -18 0.38 No 41 75.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94201590 - NM_005591 MRE11 0 . . . 2.86 80.97 32 6.75 Yes 7 0.97 Yes 0 0 No -31 0.62 No 34 41.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68445596 + NM_133509 RAD51B 0 . . . 2.67 70.39 18 5.34 No 61 1.1 Yes 0 0 No -30 0.49 No 42 41.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104180945 - NM_001100119 XRCC3 0 . . . 1.63 83.28 35 6.4 Yes 42 0.89 Yes 0 0 No -34 0.71 Yes 40 76.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68401928 + NM_133509 RAD51B 0 . . . 1.94 76.44 18 6.15 Yes 5 0.26 No 0 0 No -26 0.74 Yes 44 69.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68584068 + NM_133509 RAD51B 0 . . . 4.5 74.17 34 6.98 Yes 62 -3.47 No 0 0 No -33 0.83 Yes 47 76.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68815287 + NM_004360 CDH1 0 . . . 4.65 86.68 20 5.17 No 2 1.51 Yes 0 0 No -29 0.46 No 15 61.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6018293 - NM_000535 PMS2 0 . . . 0.48 68.45 26 5.29 No 44 0.46 No 0 0 No -21 0.53 No 48 61.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68493567 + NM_133509 RAD51B 0 . . . 2.86 61.46 48 7.66 Yes 64 0.9 Yes 0 0 No -31 0.6 No 47 56.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59854073 - NM_032043 BRIP1 0 . . . 3.52 72.89 16 5.29 No 35 -3.95 No 0 0 No -18 0.48 No 49 73.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47719027 + NM_000251 MSH2 0 . . . 2.37 71.61 17 4.55 No 46 -4.79 No 0 0 No -16 0.36 No 48 66.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68915027 + NM_133509 RAD51B 0 . . . 4.71 75.24 20 5.57 Yes 50 -3.85 No 0 0 No -19 0.67 Yes 40 68.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68585552 + NM_133509 RAD51B 0 . . . 10.98 94.42 43 6.91 Yes -1 0.54 No 0 0 No -42 0.37 No 39 77.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131905361 + NM_005732 RAD50 0 . . . 1.14 62.4 18 3.67 No 18 0.38 No 0 0 No -24 0.92 Yes 46 69.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131929619 + NM_005732 RAD50 0 . . . 1.96 72.83 25 4.78 No 73 -6.37 No 0 0 No -24 0.92 Yes 47 49.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190714560 + NM_000534 PMS1 0 . . . 0.15 59.65 23 5.39 No 41 1.05 Yes 0 0 No -26 0.7 Yes 36 84.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69067865 + NM_133509 RAD51B 0 . . . 3.07 65.55 14 4.91 No 16 0.62 No 0 0 No -23 0.61 No 49 41.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68863247 + NM_004360 CDH1 0 . . . 3.97 76.69 29 5.3 No 57 0.1 No 0 0 No -28 0.94 Yes 46 75.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68366176 + NM_133509 RAD51B 0 . . . 4.45 80.61 20 6.28 Yes 15 0.75 No 0 0 No -19 0.61 No 43 84.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68879273 + NM_133509 RAD51B 0 . . . 5.9 76.81 66 7.85 Yes 52 0.61 No 0 0 No -28 0.73 Yes 52 69.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68861394 + NM_133509 RAD51B 0 . . . 8.83 79.43 22 4.74 No 27 0.59 No 0 0 No -21 0.88 Yes 45 65.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59860132 - NM_032043 BRIP1 0 . . . 3.09 68.84 31 5.57 Yes 26 0.58 No 0 0 No -30 0.76 Yes 37 88.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108218229 + NM_000051 ATM 0 . . . 7.76 93.82 27 6.14 Yes 12 0.12 No 0 0 No -23 0.71 Yes 49 59.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69064698 + NM_133509 RAD51B 0 . . . 2.8 84.13 29 7.68 Yes 10 0.23 No 0 0 No -28 0.92 Yes 48 45.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6019019 - NM_000535 PMS2 0 . . . 1.95 84.41 30 5.06 No 9 0.52 No 0 0 No -24 0.71 Yes 44 67.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108095619 + NM_000051 ATM 0 . . . 4.32 77.25 23 5.8 Yes 39 0.87 Yes 0 0 No -22 0.35 No 43 88.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59803778 - NM_032043 BRIP1 0 . . . 5.43 72.99 18 4.58 No 13 0.28 No 0 0 No -25 0.53 No 45 86.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41008241 + NM_001164269 RAD51 0 . . . 2.13 67.33 38 4.24 No 65 1.42 Yes 0 0 No -21 0.48 No 48 77.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68741943 + NM_133509 RAD51B 0 . . . 5.99 73.21 15 4.62 No 24 0.76 No 0 0 No -26 0.44 No 47 47.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1225806 + NM_000455 STK11 0 . . . 4.88 82.48 20 5.1 No 71 -0.76 No 0 0 No -27 0.44 No 50 74.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84387284 - NM_139076 FAM175A 0 . . . 3.81 67.87 26 4.09 No 67 -3.62 No 0 0 No -25 0.85 Yes 49 52.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47765946 + NM_000251 MSH2 0 . . . 8.71 84.29 34 7.46 Yes 45 -1.2 No 0 0 No -33 0.61 No 45 52.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59764330 - NM_032043 BRIP1 0 . . . 4.9 71.76 17 4.8 No 75 -3.94 No 0 0 No -48 0.49 No 40 95.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59835852 - NM_032043 BRIP1 0 . . . 3.8 74.13 23 5.97 Yes 62 0.45 No 0 0 No -22 0.87 Yes 42 49.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47741774 + NM_000251 MSH2 0 . . . 3.9 0 32 5.66 Yes 51 1.14 Yes 0 0 No -31 0.91 Yes 12 50.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94215391 - NM_005591 MRE11 0 . . . 5.07 81.37 28 4.04 No 47 0.77 No 0 0 No -27 0.44 No 40 35.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190735556 + NM_000534 PMS1 0 . . . 4.02 73.41 59 8.05 Yes 30 0.28 No 0 0 No -39 0.77 Yes 45 64.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84407786 - NM_139076 FAM175A 0 . . . 0.78 59.53 36 5.61 Yes 45 0.44 No 0 0 No -25 0.8 Yes 49 56.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1215917 + NM_000455 STK11 0 . . . 3.6 85.02 17 5.7 Yes 4 1.2 Yes 0 0 No -26 0.59 No 43 47.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29089152 - NM_001005735 CHEK2 0 . . . 3.82 80.35 17 5.7 Yes 37 0.81 Yes 0 0 No -27 0.59 No 48 73.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90992202 - NM_002485 NBN 0 . . . 5.55 86.45 13 5.29 No 68 -3.9 No 0 0 No -21 0.5 No 39 47.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32948283 + NM_000059 BRCA2 0 . . . 6.12 74.27 22 5.56 Yes 68 1.56 Yes 0 0 No -21 0.92 Yes 39 50.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68549613 + NM_133509 RAD51B 0 . . . 1.39 75.9 63 6.87 Yes 32 0.49 No 0 0 No -27 0.89 Yes 45 75.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37072349 + NM_000249 MLH1 0 . . . 5.98 70.99 38 6.02 Yes 34 -2.15 No 0 0 No -38 0.57 No 42 91.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68414752 + NM_133509 RAD51B 0 . . . 1.49 60.94 28 5.29 No 37 -3.78 No 0 0 No -27 0.39 No 50 34.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68768636 + NM_133509 RAD51B 0 . . . 3.95 84.66 35 6.34 Yes 72 0.76 No 0 0 No -24 0.42 No 55 43.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47768834 + NM_000251 MSH2 0 . . . 8.95 88.05 36 6.52 Yes 14 0.7 No 0 0 No -35 0.78 Yes 44 88.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190689967 + NM_000534 PMS1 0 . . . 3.84 72.11 11 5.39 No 57 1.18 Yes 0 0 No -19 0.23 No 28 46.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7564122 - NM_000546 TP53 0 . . . 3.01 0 13 4.36 No 70 0.47 No 0 0 No -28 0.51 No 31 82.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108128120 + NM_000051 ATM 0 . . . 8.1 85.31 17 5.57 Yes 37 0.77 No 0 0 No -16 0.62 No 43 73.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45802329 - NM_001048171 MUTYH 0 . . . 0.06 59.82 15 5.29 No 75 0.48 No 0 0 No -21 0.71 Yes 46 69.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41006081 + NM_001164269 RAD51 0 . . . 2.03 80.49 18 4.9 No 35 1.7 Yes 0 0 No -36 0.41 No 23 63.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89698059 + NM_000314 PTEN 0 . . . 6.97 84.77 16 5 No 54 0.51 No 0 0 No -20 0.78 Yes 30 85.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68526721 + NM_133509 RAD51B 0 . . . 0.4 0 16 5.39 No 7 0.5 No 0 0 No -22 0.76 Yes 39 53.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215593775 - NM_000465 BARD1 0 . . . 2.15 82.76 69 6.98 Yes 37 0.72 No 24 0.84 Yes -16 0.77 Yes 47 72.48 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr14 68845060 + NM_133509 RAD51B 0 . . . 9.13 79.95 29 4.06 No 74 0.84 Yes 0 0 No -25 0.5 No 47 74.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7563484 - NM_000546 TP53 0 . . . 0.99 64.33 33 6.24 Yes 51 0.3 No 0 0 No -36 0.72 Yes 34 89.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68448633 + NM_133509 RAD51B 0 . . . 2.45 70.77 32 6.68 Yes 57 -5.29 No 0 0 No -31 0.42 No 49 44.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68812493 + NM_004360 CDH1 0 . . . 1.25 63.77 37 7.32 Yes 68 0.25 No 0 0 No -36 0.81 Yes 46 17.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105172347 + NM_021930 RINT1 0 . . . 4.04 77.88 28 5.29 No 68 -3.37 No 0 0 No -27 0.69 Yes 48 60.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104178717 - NM_001100119 XRCC3 0 . . . 0.34 0 18 4.43 No 19 1.07 Yes 0 0 No -17 0.76 Yes 47 69.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33445012 - NM_002878 RAD51D 0 . . . 4.19 85.72 17 5.38 No 69 1.15 Yes 0 0 No -26 0.77 Yes 48 60.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68678613 + NM_133509 RAD51B 0 . . . 2.2 69.33 27 4.72 No 32 0.23 No 0 0 No -27 0.79 Yes 32 71.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59757636 - NM_032043 BRIP1 0 . . . 7.22 88.68 21 5.2 No 9 1.08 Yes 0 0 No -20 0.79 Yes 49 95.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131932262 + NM_005732 RAD50 0 . . . 0.6 65.99 105 10.38 Yes 63 0.95 Yes 0 0 No -20 0.82 Yes 33 49.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68462696 + NM_133509 RAD51B 0 . . . 3.4 86.85 17 4.69 No -1 -1.65 No 0 0 No -21 0.73 Yes 43 84.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59783734 - NM_032043 BRIP1 0 . . . 0.57 79.49 39 6.56 Yes 38 -4.45 No 0 0 No -25 0.9 Yes 42 63.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152350479 - NM_005431 XRCC2 0 . . . 2.71 0 21 4.59 No 72 0.09 No 0 0 No -25 0.61 No 60 53.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108150070 + NM_000051 ATM 0 . . . 5.08 72.33 24 4.02 No 37 -3.42 No 0 0 No -23 0.7 Yes 36 77.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152359704 - NM_005431 XRCC2 0 . . . 1.73 76.63 32 4.36 No 15 0.33 No 0 0 No -31 0.47 No 43 71.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48018262 + NM_000179 MSH6 0 . . . 0.03 0 24 5.37 No 57 0.37 No 0 0 No -23 0.59 No 57 30.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68718840 + NM_133509 RAD51B 0 . . . 8.52 90.42 27 6.24 Yes 9 0.65 No 0 0 No -26 0.82 Yes 49 91.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7568402 - NM_000546 TP53 0 . . . 1.41 78.67 42 5.25 No 70 0.67 No 0 0 No -16 0.71 Yes 45 50.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59810937 - NM_032043 BRIP1 0 . . . 3.44 68.29 21 5.09 No 41 0.49 No 0 0 No -20 0.72 Yes 55 32.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29111991 - NM_001005735 CHEK2 0 . . . 4.23 72.82 53 9.17 Yes 11 0.53 No 0 0 No -30 0.56 No 47 71.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40996821 + NM_001164269 RAD51 0 . . . 1.83 66.93 24 4.54 No 21 1.3 Yes 0 0 No -23 0.78 Yes 37 59.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190652525 + NM_000534 PMS1 0 . . . 2.25 63.65 36 5.77 Yes 72 0.77 No 0 0 No -35 0.5 No 40 76.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68767818 + NM_133509 RAD51B 0 . . . 5.55 75.63 27 5.57 Yes 74 0.72 No 0 0 No -26 0.79 Yes 44 70.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23650977 - NM_024675 PALB2 0 . . . 3.6 85.02 28 5.22 No 4 1.2 Yes 0 0 No -27 0.66 No 38 42.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90996808 - NM_002485 NBN 0 . . . 3.54 70.81 14 4.36 No 11 -0.74 No 0 0 No -13 0.26 No 47 56.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68837885 + NM_004360 CDH1 0 . . . 1.11 78.95 17 5.29 No 20 1 Yes 0 0 No -21 0.68 Yes 49 79.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94183304 - NM_005591 MRE11 0 . . . 3.72 72.02 25 4.35 No 70 1.28 Yes 0 0 No -22 0.71 Yes 49 70.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68294013 + NM_133509 RAD51B 0 . . . 3.29 64.56 24 5.3 No 48 0.48 No 0 0 No -23 0.59 No 30 79.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68718782 + NM_133509 RAD51B 0 . . . 5.77 84.45 23 4.8 No 6 0.38 No 0 0 No -22 0.87 Yes 36 37.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68757625 + NM_133509 RAD51B 0 . . . 1.26 63.5 13 4.36 No 21 -1.33 No 0 0 No -44 0.54 No 42 74.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1219132 + NM_000455 STK11 0 . . . 13.55 79.59 24 6.54 Yes 13 0.44 No 0 0 No -36 0.87 Yes 45 88.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68960107 + NM_133509 RAD51B 0 . . . 4.11 73.58 28 6.46 Yes 61 0.22 No 0 0 No -27 0.93 Yes 35 66.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68328107 + NM_133509 RAD51B 0 . . . 0.6 74.68 51 9.26 Yes 74 0.96 Yes 0 0 No -50 0.47 No 54 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37077083 + NM_000249 MLH1 0 . . . 4.57 73.34 26 5.57 Yes 11 0.86 Yes 0 0 No -26 0.72 Yes 47 91.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23616294 - NM_024675 PALB2 0 . . . 1.94 83.8 64 8.56 Yes 33 0.98 Yes 0 0 No -24 0.49 No 50 44.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56770325 + NM_058216 RAD51C 0 . . . 0.27 65.86 33 6.08 Yes -3 0.22 No 0 0 No -32 0.84 Yes 49 90.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68844180 + NM_133509 RAD51B 0 . . . 0.9 66.85 27 6.96 Yes -1 -1.69 No 0 0 No -26 0.9 Yes 41 18.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84405462 - NM_139076 FAM175A 0 . . . 2.59 0 47 7.01 Yes -4 0.59 No 0 0 No -46 0.6 No 52 57.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33437798 - NM_002878 RAD51D 0 . . . 2.08 84.34 16 5.99 Yes 18 -1.58 No 0 0 No -22 0.62 No 20 47.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21967069 - NM_000077 CDKN2A 0 . . . 4.18 75.5 31 5.47 No 0 0.65 No 0 0 No -31 0.51 No 41 55.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94212227 - NM_005591 MRE11 0 . . . 1.61 0 15 4.58 No 23 1.6 Yes 0 0 No -29 0.32 No 35 94.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131921320 + NM_005732 RAD50 0 . . . 3.59 0 30 5.38 No 32 0.82 Yes 0 0 No -29 0.33 No 26 74.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68338272 + NM_133509 RAD51B 0 . . . 1.59 68.48 21 6.85 Yes 67 -1.84 No 0 0 No -20 0.88 Yes 41 84.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21966185 - NM_000077 CDKN2A 0 . . . 0.15 75.81 36 7.06 Yes 26 0.96 Yes 0 0 No -35 0.6 No 21 60.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47751062 + NM_000251 MSH2 0 . . . 5.7 65.64 13 5.1 No NA NA NA 0 0 No -19 0.46 No 46 37.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68347250 + NM_133509 RAD51B 0 . . . 2.69 67.61 24 5.48 No 74 -1.45 No 0 0 No -26 0.55 No 46 81.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56789813 + NM_058216 RAD51C 0 . . . 2.72 83.55 26 4.97 No 46 -2.24 No 0 0 No -25 0.45 No 49 29.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84391986 - NM_139076 FAM175A 0 . . . 6.03 66.09 18 4.89 No 47 0.61 No 0 0 No -29 0.42 No 51 61.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69005887 + NM_133509 RAD51B 0 . . . 4.32 90.7 19 5.53 No 64 0.07 No 0 0 No -24 0.47 No 47 76.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108231395 + NM_000051 ATM 0 . . . 0.27 68.92 28 5.25 No 56 0.22 No 0 0 No -53 0.42 No 40 37.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33439685 - NM_002878 RAD51D 0 . . . 3.51 72.54 25 5.5 No 24 0.01 No 0 0 No -22 0.34 No 34 51.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645071 - NM_024675 PALB2 0 . . . 0.69 76.04 27 6.71 Yes 75 -5.53 No 0 0 No -26 0.85 Yes 50 62.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37035246 + NM_000249 MLH1 0 . . . 6.88 81.85 44 6.92 Yes 20 0.23 No 22 0.54 Yes -34 0.65 No 38 54.42 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68907213 + NM_133509 RAD51B 0 . . . 1.16 77.71 26 5.66 Yes 33 1.32 Yes 0 0 No -25 0.94 Yes 54 81.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190674301 + NM_000534 PMS1 0 . . . 1.42 70.25 23 5.13 No 19 0.28 No 0 0 No -23 0.73 Yes 30 45.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48006339 + NM_000179 MSH6 0 . . . 8.72 98.63 17 6.5 Yes 7 -0.68 No 0 0 No -27 0.74 Yes 46 44.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84391513 - NM_139076 FAM175A 0 . . . 6.77 80.51 33 4.18 No 63 0.52 No 0 0 No -27 0.93 Yes 51 43.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29094890 - NM_001005735 CHEK2 0 . . . 2.26 84.64 29 4.85 No 41 0.79 Yes 0 0 No -22 0.55 No 48 48.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105184045 + NM_021930 RINT1 0 . . . 1.16 0 25 5.31 No 61 1.02 Yes 0 0 No -24 0.65 No 53 76.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59803683 - NM_032043 BRIP1 0 . . . 7.13 74.45 16 5.92 Yes 12 1.34 Yes 0 0 No -15 0.45 No 46 59.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41020407 + NM_001164269 RAD51 0 . . . 3.65 69.75 26 6.76 Yes -2 0.81 Yes 0 0 No -26 0.24 No 41 56.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104171807 - NM_001100119 XRCC3 0 . . . 0.38 70.07 29 5.13 No 14 0.76 No 0 0 No -28 0.46 No 49 67.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68893988 + NM_133509 RAD51B 0 . . . 2.07 0 24 5.83 Yes 43 -0.96 No 0 0 No -27 0.54 No 15 28.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69069095 + NM_133509 RAD51B 0 . . . 3.53 69.95 29 4.39 No 16 2.09 Yes 0 0 No -50 0.61 No 42 72.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69090121 + NM_133509 RAD51B 0 . . . 0.52 70.4 25 4.97 No 44 0.55 No 0 0 No -24 0.45 No 30 73.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48031096 + NM_000179 MSH6 0 . . . 2.3 80.86 33 5.92 Yes 11 0.68 No 0 0 No -43 0.37 No 47 73.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69142044 + NM_133509 RAD51B 0 . . . 4.4 81.42 23 7.42 Yes 67 0.1 No 0 0 No -22 0.66 No 45 42.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68563614 + NM_133509 RAD51B 0 . . . 3.64 85.44 27 4.32 No 57 0.72 No 0 0 No -26 0.4 No 43 91.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68748769 + NM_133509 RAD51B 0 . . . 1 61.9 10 5.16 No 41 -0.35 No 0 0 No -30 0.43 No 63 24.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59859873 - NM_032043 BRIP1 0 . . . 1.87 73.12 15 4.86 No 59 0.63 No 0 0 No -22 0.37 No 44 85.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75489065 - NM_001040108 MLH3 0 . . . 3.35 76.88 29 6.44 Yes 74 -6.29 No 0 0 No -28 0.77 Yes 43 87.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94223207 - NM_005591 MRE11 0 . . . 3.45 0 19 5.49 No 40 -1.12 No 0 0 No -22 0.29 No 37 24.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89624984 + NM_000314 PTEN 0 . . . 2.14 71.95 28 5.38 No 70 -2.93 No 0 0 No -27 0.61 No 47 57.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69083545 + NM_133509 RAD51B 0 . . . 4.44 74.12 40 5.01 No 74 0.88 Yes 0 0 No -26 0.62 No 35 72.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68930564 + NM_133509 RAD51B 0 . . . 0.56 73.21 28 5.83 Yes 53 2.46 Yes 0 0 No -27 0.83 Yes 23 22.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89695526 + NM_000314 PTEN 0 . . . 4.89 75.32 18 4.69 No 58 1.13 Yes 0 0 No -18 0.42 No 42 42.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47704431 + NM_000251 MSH2 0 . . . 1.31 0 20 5.1 No 18 1.23 Yes 0 0 No -27 0.55 No 34 51.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68868481 + NM_133509 RAD51B 0 . . . 5.66 86.04 34 7.68 Yes 76 0.05 No 0 0 No -33 0.61 No 53 84.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104168043 - NM_001100119 XRCC3 0 . . . 5.97 78.03 12 4.15 No 8 1.27 Yes 0 0 No -19 0.5 No 50 91.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190694736 + NM_000534 PMS1 0 . . . 4.86 69.23 56 7.46 Yes 68 1.05 Yes 0 0 No -38 0.43 No 44 52.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105193302 + NM_021930 RINT1 0 . . . 2.83 79.54 24 3.95 No 4 0.9 Yes 0 0 No -23 0.64 No 54 61.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68824700 + NM_004360 CDH1 0 . . . 2.05 79.09 26 5.5 No 18 -1.73 No 0 0 No -28 0.59 No 46 56.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41211019 - NM_007294 BRCA1 0 . . . 4.42 79.71 20 5.83 Yes 50 1.18 Yes 0 0 No -19 0.68 Yes 53 43.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41207950 - NM_007294 BRCA1 0 . . . 4.34 81.9 37 7.6 Yes 18 0.87 Yes 0 0 No -36 0.74 Yes 40 86.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190690207 + NM_000534 PMS1 0 . . . 1.81 62.16 41 8.06 Yes 29 0.87 Yes 0 0 No -27 0.49 No 29 58.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59847541 - NM_032043 BRIP1 0 . . . 1.42 62.85 24 4.99 No 18 1.18 Yes 0 0 No -23 0.64 No 37 75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68496298 + NM_133509 RAD51B 0 . . . 7.03 79.27 40 4.3 No 71 0.57 No 0 0 No -24 0.68 Yes 49 87.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47723606 + NM_000251 MSH2 0 . . . 6.09 85.78 23 6.24 Yes 12 0.51 No 0 0 No -22 0.88 Yes 46 61.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079089 + NM_000249 MLH1 0 . . . 1.91 74.5 18 5.29 No 76 0.27 No 0 0 No -17 0.78 Yes 55 46.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885584 - NM_032043 BRIP1 0 . . . 0.18 0 36 6.48 Yes 5 0.39 No 0 0 No -35 0.63 No 38 63.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48031016 + NM_000179 MSH6 0 . . . 2.03 74.79 13 4.78 No 49 0.47 No 0 0 No -28 0.27 No 42 51.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84391104 - NM_139076 FAM175A 0 . . . 5.26 79.65 18 4.13 No 33 0.95 Yes 0 0 No -58 0.51 No 43 84.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68799639 + NM_004360 CDH1 0 . . . 5.22 80.64 46 6.4 Yes 44 1.86 Yes 0 0 No -29 0.32 No 14 70.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59905998 - NM_032043 BRIP1 0 . . . 4.61 75.04 24 5.48 No 63 1.6 Yes 0 0 No -23 0.84 Yes 49 85.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68820119 + NM_133509 RAD51B 0 . . . 8.78 88.64 34 7.72 Yes 57 0.6 No 0 0 No -33 0.71 Yes 44 91.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68917171 + NM_133509 RAD51B 0 . . . 5.92 82.31 12 4.24 No 58 1.02 Yes 0 0 No -35 0.94 Yes 40 92.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89683768 + NM_000314 PTEN 0 . . . 7 78.36 36 6 Yes -1 0.57 No 0 0 No -22 0.28 No 24 58.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108112744 + NM_000051 ATM 0 . . . 3.36 74.35 19 5.83 Yes 3 0.7 No 0 0 No -27 0.76 Yes 48 82.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68477434 + NM_133509 RAD51B 0 . . . 1.36 62.2 32 7.14 Yes 27 1.06 Yes 0 0 No -31 0.66 No 45 65.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23644338 - NM_024675 PALB2 0 . . . 6.14 88.68 16 4.69 No 9 0.99 Yes 0 0 No -43 0.35 No 49 87.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47802421 + NM_000251 MSH2 0 . . . 1.65 74.53 16 4.69 No -1 0.54 No 0 0 No -20 0.79 Yes 44 90.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29090508 - NM_001005735 CHEK2 0 . . . 0.78 73.22 15 4.36 No 76 -3.4 No 0 0 No -30 0.55 No 47 43.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68856243 + NM_133509 RAD51B 0 . . . 2.04 71.89 27 5.39 No 73 0.74 No 0 0 No -26 0.47 No 46 50 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45794730 - NM_001048171 MUTYH 0 . . . 9.28 71.67 21 4.58 No 45 0.04 No 0 0 No -20 0.95 Yes 47 74.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69119544 + NM_133509 RAD51B 0 . . . 7.89 83.18 36 6.39 Yes 40 -0.71 No 0 0 No -26 0.4 No 48 47.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89699107 + NM_000314 PTEN 0 . . . 2.73 0 12 4.1 No 65 1.95 Yes 0 0 No -22 0.16 No 42 32.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68639650 + NM_133509 RAD51B 0 . . . 1.44 0 22 5.29 No 24 0.31 No 0 0 No -53 0.44 No 46 83.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90957654 - NM_002485 NBN 0 . . . 1.07 72.74 26 5.2 No 70 0.44 No 0 0 No -24 0.36 No 46 80.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41194569 - NM_007294 BRCA1 0 . . . 4.01 78.05 31 5.97 Yes 46 1.5 Yes 0 0 No -30 0.62 No 17 61.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69106170 + NM_133509 RAD51B 0 . . . 3.32 72.68 23 4.58 No 11 0.71 No 0 0 No -22 0.82 Yes 42 74.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59755563 - NM_032043 BRIP1 0 . . . 5.05 75.29 37 7.15 Yes 46 1.38 Yes 0 0 No -36 0.74 Yes 39 85.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59890575 - NM_032043 BRIP1 0 . . . 9.7 85.42 22 4.57 No 19 2.05 Yes 0 0 No -21 0.69 Yes 39 92.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48027000 + NM_000179 MSH6 0 . . . 3.31 74.65 25 4.88 No 3 1.47 Yes 0 0 No -24 0.8 Yes 19 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68416567 + NM_133509 RAD51B 0 . . . 5.71 83.6 27 6.1 Yes 8 1.08 Yes 0 0 No -31 0.51 No 43 68.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68956852 + NM_133509 RAD51B 0 . . . 0.02 78.75 27 5.04 No 61 -2.73 No 0 0 No -49 0.89 Yes 51 70.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68329894 + NM_133509 RAD51B 0 . . . 2.3 84.41 27 5.74 Yes 73 -3.1 No 0 0 No -26 0.94 Yes 33 59.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131932646 + NM_005732 RAD50 0 . . . 1.12 73.85 27 5.2 No 1 0.14 No 0 0 No -26 0.6 No 51 36.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68917766 + NM_133509 RAD51B 0 . . . 0.28 0 16 5.36 No 11 0.62 No 0 0 No -24 0.45 No 47 80.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29116210 - NM_001005735 CHEK2 0 . . . 3.05 74.68 22 4.15 No 53 0.54 No 0 0 No -21 0.52 No 36 91.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190737684 + NM_000534 PMS1 0 . . . 2.99 75.08 33 5.74 Yes 74 0.92 Yes 0 0 No -27 0.63 No 49 76.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69057131 + NM_133509 RAD51B 0 . . . 5.56 74.22 34 5.92 Yes -1 1.57 Yes 0 0 No -36 0.62 No 46 64.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23654559 - NM_024675 PALB2 0 . . . 0.56 76.63 25 6.92 Yes 58 -3.89 No 0 0 No -24 0.69 Yes 48 70.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56772071 + NM_058216 RAD51C 0 . . . 7.03 82.31 79 9.37 Yes 58 1.16 Yes 0 0 No -21 0.55 No 55 65.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68866038 + NM_004360 CDH1 0 . . . 2.35 69.08 43 6.71 Yes 60 -3.86 No 0 0 No -42 0.81 Yes 35 50.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41022838 + NM_001164269 RAD51 0 . . . 5.21 84.22 13 3.35 No 33 1.04 Yes 0 0 No -21 0.2 No 50 92.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69135158 + NM_133509 RAD51B 0 . . . 8.13 77.81 18 4.36 No 37 0.86 Yes 0 0 No -17 0.48 No 21 76.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190711798 + NM_000534 PMS1 0 . . . 2.57 74.76 18 4.9 No 33 1.2 Yes 0 0 No -24 0.63 No 40 62.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90978187 - NM_002485 NBN 0 . . . 6.18 81.87 12 4.9 No 67 -6.31 No 0 0 No -50 0.62 No 46 60.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68474172 + NM_133509 RAD51B 0 . . . 4.72 82.43 27 4.21 No 76 1.18 Yes 0 0 No -26 0.74 Yes 36 36.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68831137 + NM_133509 RAD51B 0 . . . 3.15 87.34 14 4.64 No 0 0.5 No 0 0 No -19 0.63 No 43 48.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47700002 + NM_000251 MSH2 0 . . . 0.68 63.28 30 4.15 No 75 -4.16 No 0 0 No -29 0.55 No 59 31.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105205585 + NM_021930 RINT1 0 . . . 4.66 85.01 18 4.2 No 41 -2.97 No 0 0 No -17 0.71 Yes 48 43.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37034666 + NM_000249 MLH1 0 . . . 7.75 76.55 57 7.94 Yes 53 -3.92 No 0 0 No -42 0.63 No 49 55.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59812518 - NM_032043 BRIP1 0 . . . 9.14 75.38 21 7.52 Yes 53 0.22 No 0 0 No -20 0.78 Yes 49 66.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190657558 + NM_000534 PMS1 0 . . . 2 87.36 36 6.22 Yes 54 1.08 Yes 0 0 No -35 0.63 No 40 56.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94214472 - NM_005591 MRE11 0 . . . 2.93 84.41 22 4.88 No 10 1.05 Yes 0 0 No -24 0.47 No 48 36.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47694606 + NM_000251 MSH2 0 . . . 1.69 0 43 6.51 Yes 16 0.71 No 0 0 No -43 0.53 No 42 87.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68496498 + NM_133509 RAD51B 0 . . . 6.76 83.77 22 6.82 Yes 56 -3.46 No 0 0 No -21 0.75 Yes 45 48.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59906925 - NM_032043 BRIP1 0 . . . 1.57 68.41 29 5.74 Yes 54 0.6 No 0 0 No -28 0.81 Yes 45 58.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7592730 - NM_000546 TP53 0 . . . 5.8 80.4 22 4.18 No 14 0.24 No 0 0 No -22 0.42 No 44 80.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48031368 + NM_000179 MSH6 0 . . . 5.53 81.72 25 5.48 No 8 0.58 No 0 0 No -24 0.87 Yes 50 69.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23631432 - NM_024675 PALB2 0 . . . 3.8 75.31 15 5.51 No 0 1.11 Yes 0 0 No -44 0.41 No 48 82.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108122073 + NM_000051 ATM 0 . . . 0.83 75.71 19 4.54 No 57 1.11 Yes 0 0 No -23 0.73 Yes 48 75.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108096022 + NM_000051 ATM 0 . . . 8.16 86.18 18 5.38 No 2 0.67 No 0 0 No -27 0.82 Yes 46 61.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59755446 - NM_032043 BRIP1 0 . . . 3.82 70.84 27 5.39 No 28 0.4 No 0 0 No -26 0.42 No 41 82.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89629211 + NM_000314 PTEN 0 . . . 3.57 78.14 24 6.23 Yes -3 0.01 No 0 0 No -23 0.55 No 61 44.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215643804 - NM_000465 BARD1 0 . . . 1.01 73.45 20 5.57 Yes 60 0.54 No 0 0 No -19 0.79 Yes 31 51.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6045271 - NM_000535 PMS2 0 . . . 5.72 89.32 26 6.62 Yes 64 1.01 Yes 0 0 No -25 0.62 No 49 82.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69146246 + NM_133509 RAD51B 0 . . . 6 75.94 27 5.62 Yes 7 1.7 Yes 0 0 No -26 0.68 Yes 44 89.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68844941 + NM_133509 RAD51B 0 . . . 3.73 66.37 27 5.2 No 48 1.24 Yes 0 0 No -31 0.7 Yes 33 77.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89679837 + NM_000314 PTEN 0 . . . 2.78 78.07 35 5.95 Yes 10 0.08 No 0 0 No -34 0.64 No 48 90.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68931806 + NM_133509 RAD51B 0 . . . 7.73 81.58 23 5.28 No 43 0.4 No 0 0 No -22 0.77 Yes 35 86.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59902941 - NM_032043 BRIP1 0 . . . 5.68 79.19 18 4.57 No 1 1.13 Yes 0 0 No -17 0.79 Yes 50 35.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215596871 - NM_000465 BARD1 0 . . . 1.13 69.61 24 4.43 No 34 -2.11 No 0 0 No -23 0.74 Yes 52 77.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59936223 - NM_032043 BRIP1 0 . . . 0.01 72.77 28 5.68 Yes 21 0.76 No 0 0 No -27 0.69 Yes 37 92.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105176094 + NM_021930 RINT1 0 . . . 5.31 87.26 37 11.39 Yes 9 1.13 Yes 0 0 No -36 0.61 No 49 96.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68296346 + NM_133509 RAD51B 0 . . . 2.77 61.64 15 3.37 No 29 0.51 No 0 0 No -18 0.9 Yes 26 83.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32947310 + NM_000059 BRCA2 0 . . . 3.6 85.02 37 7.47 Yes 60 1.38 Yes 0 0 No -36 0.62 No 54 74.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89682550 + NM_000314 PTEN 0 . . . 8.75 90.64 44 9.51 Yes 22 0.77 Yes 0 0 No -35 0.27 No 36 75.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94157381 - NM_005591 MRE11 0 . . . 2.02 68.43 52 7.26 Yes -3 0.12 No 0 0 No -38 0.38 No 35 55.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32918255 + NM_000059 BRCA2 0 . . . 4.96 72.5 40 7.62 Yes 1 0.1 No 0 0 No -25 0.92 Yes 44 42.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215671856 - NM_000465 BARD1 0 . . . 3.17 87.77 27 5.74 Yes 47 0.93 Yes 0 0 No -26 0.64 No 39 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68863282 + NM_004360 CDH1 0 . . . 2.11 78.31 25 5.41 No 28 -1.83 No 0 0 No -23 0.64 No 11 44.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32908445 + NM_000059 BRCA2 0 . . . 2.99 67.67 30 6.39 Yes 10 1.19 Yes 0 0 No -29 0.43 No 48 67.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59757600 - NM_032043 BRIP1 0 . . . 2.87 0 29 5.35 No 9 1.29 Yes 0 0 No -28 0.72 Yes 49 59.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68634967 + NM_133509 RAD51B 0 . . . 7.55 89.27 45 7.05 Yes 68 0.8 Yes 0 0 No -44 0.51 No 47 46.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32895872 + NM_000059 BRCA2 0 . . . 6.34 86.5 24 4.74 No 26 0.72 No 0 0 No -23 0.79 Yes 40 86.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90968577 - NM_002485 NBN 0 . . . 0.97 71.17 23 4.62 No 24 -3.56 No 0 0 No -22 0.81 Yes 17 41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68501107 + NM_133509 RAD51B 0 . . . 2.83 90.57 39 5.97 Yes 40 0.66 No 0 0 No -31 0.71 Yes 50 81.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94179778 - NM_005591 MRE11 0 . . . 4.58 67.65 17 4.69 No 10 1.32 Yes 0 0 No -44 0.59 No 44 71.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1223299 + NM_000455 STK11 0 . . . 4.29 67.16 13 5.06 No NA NA NA 0 0 No -23 0.27 No 31 33.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33441457 - NM_002878 RAD51D 0 . . . 6.93 73.83 39 5.04 No 15 0.56 No 0 0 No -25 0.63 No 43 82.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68804224 + NM_004360 CDH1 0 . . . 5.29 74.61 23 3.78 No 60 1.61 Yes 0 0 No -22 0.62 No 44 92.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59813135 - NM_032043 BRIP1 0 . . . 2.88 82.02 21 4.79 No 2 1.5 Yes 0 0 No -20 0.87 Yes 48 45.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68420198 + NM_133509 RAD51B 0 . . . 4.26 87.88 34 6.16 Yes 6 0.33 No 0 0 No -29 0.37 No 45 42.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215659087 - NM_000465 BARD1 0 . . . 3.41 64.38 17 4.58 No 33 0.88 Yes 0 0 No -31 0.42 No 36 56.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47732437 + NM_000251 MSH2 0 . . . 3.96 77.63 22 5 No 27 -3.53 No 0 0 No -21 0.76 Yes 49 51.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68600622 + NM_133509 RAD51B 0 . . . 1.95 0 18 4.9 No 4 1.27 Yes 0 0 No -26 0.57 No 41 68.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68635758 + NM_133509 RAD51B 0 . . . 3.97 0 15 5.48 No 65 -2.32 No 0 0 No -20 0.37 No 39 82.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68481987 + NM_133509 RAD51B 0 . . . 3.41 69.57 33 6.43 Yes 16 0.89 Yes 0 0 No -32 0.67 Yes 38 91.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29111900 - NM_001005735 CHEK2 0 . . . 3.3 77.77 18 4.69 No 45 -3.36 No 0 0 No -17 0.76 Yes 47 61.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68851904 + NM_133509 RAD51B 0 . . . 3.86 75.71 32 6.62 Yes 7 1.16 Yes 0 0 No -31 0.97 Yes 51 87.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1224315 + NM_000455 STK11 0 . . . 6.49 85.06 76 8.21 Yes 13 -0.82 No 0 0 No -29 0.37 No 45 95.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56769425 + NM_058216 RAD51C 0 . . . 4.42 82.35 19 4.55 No 60 1.75 Yes 0 0 No -28 0.57 No 48 31.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68400210 + NM_133509 RAD51B 0 . . . 7.69 82.3 28 6.15 Yes 36 1.51 Yes 0 0 No -31 0.84 Yes 49 54.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59808188 - NM_032043 BRIP1 0 . . . 4.4 74.21 37 5.64 Yes 22 0.47 No 0 0 No -30 0.34 No 42 84.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48008747 + NM_000179 MSH6 0 . . . 5.07 84.22 38 7.23 Yes 33 1.04 Yes 0 0 No -23 0.48 No 50 92.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68404703 + NM_133509 RAD51B 0 . . . 4.62 0 23 5.38 No 3 0.42 No 0 0 No -22 0.53 No 35 75.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59827748 - NM_032043 BRIP1 0 . . . 1.89 0 19 4.2 No 38 0.44 No 0 0 No -28 0.52 No 17 30.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84396937 - NM_139076 FAM175A 0 . . . 0.79 62.43 35 6.91 Yes 35 1.45 Yes 0 0 No -34 0.96 Yes 23 68.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68365502 + NM_133509 RAD51B 0 . . . 1.81 66.91 39 6.32 Yes 28 0.41 No 0 0 No -38 0.8 Yes 38 58.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59911685 - NM_032043 BRIP1 0 . . . 0 70.4 23 5.39 No 68 -1.65 No 0 0 No -22 0.67 Yes 48 51.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68573922 + NM_133509 RAD51B 0 . . . 8.22 81.5 18 5.74 Yes 13 0.31 No 0 0 No -26 0.66 No 44 70.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68406104 + NM_133509 RAD51B 0 . . . 0.77 64.27 10 5.57 Yes 76 0.49 No 0 0 No -32 0.57 No 31 20.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6030716 - NM_000535 PMS2 0 . . . 4.17 72.68 41 6.55 Yes 22 0.29 No 0 0 No -21 0.54 No 36 66.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190671420 + NM_000534 PMS1 0 . . . 1.87 73.92 24 6.07 Yes 57 0.48 No 0 0 No -23 0.92 Yes 48 57.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41272496 - NM_007294 BRCA1 0 . . . 3.73 65.8 27 4.68 No 62 1.67 Yes 0 0 No -30 0.7 Yes 48 36.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68499108 + NM_133509 RAD51B 0 . . . 3.28 74.18 30 5.4 No 44 0.79 Yes 0 0 No -29 0.75 Yes 40 59.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68315430 + NM_133509 RAD51B 0 . . . 3.6 79.69 20 5.88 Yes 31 -2.74 No 0 0 No -19 0.3 No 51 94.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59894834 - NM_032043 BRIP1 0 . . . 7.69 85.81 18 5.46 No 49 1.42 Yes 0 0 No -23 0.69 Yes 48 59.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108142567 + NM_000051 ATM 0 . . . 0.67 64.44 27 5.57 Yes -3 0.27 No 0 0 No -26 0.82 Yes 38 50.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68581677 + NM_133509 RAD51B 0 . . . 0.31 52.76 25 6.08 Yes 70 -3.36 No 0 0 No -24 0.67 Yes 44 44.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68701918 + NM_133509 RAD51B 0 . . . 0.75 84.96 27 3.65 No 15 0.68 No 0 0 No -20 0.86 Yes 43 67.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220614 - NM_007294 BRCA1 0 . . . 1.79 71.79 23 8.59 Yes 4 0.55 No 0 0 No -27 0.61 No 41 49.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215604405 - NM_000465 BARD1 0 . . . 7.79 92.98 21 5.31 No 23 0.16 No 0 0 No -30 0.49 No 48 81.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59847575 - NM_032043 BRIP1 0 . . . 2.62 0 26 8.12 Yes -2 0.88 Yes 0 0 No -25 0.95 Yes 42 91.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131966330 + NM_005732 RAD50 0 . . . 1.7 71.72 28 7.29 Yes 25 0.52 No 0 0 No -27 0.78 Yes 33 74.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32897788 + NM_000059 BRCA2 0 . . . 1.76 76.65 17 4.74 No 6 0.29 No 0 0 No -21 0.62 No 51 89.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108151242 + NM_000051 ATM 0 . . . 0.33 65.55 53 8.05 Yes 6 0.26 No 0 0 No -27 0.53 No 36 57.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59904474 - NM_032043 BRIP1 0 . . . 1.34 0 22 5.29 No 1 0.57 No 0 0 No -21 0.72 Yes 46 45.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59816931 - NM_032043 BRIP1 0 . . . 0.48 66.49 16 5.83 Yes 68 0.99 Yes 0 0 No -15 0.26 No 16 38.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68537099 + NM_133509 RAD51B 0 . . . 2.75 72.01 23 3.97 No 11 0.4 No 0 0 No -23 0.58 No 47 86.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68778784 + NM_133509 RAD51B 0 . . . 4.01 77.63 44 6.92 Yes 8 0.92 Yes 0 0 No -16 0.66 No 46 64.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41213140 - NM_007294 BRCA1 0 . . . 2.58 81.8 27 4.6 No 30 0.6 No 0 0 No -26 0.43 No 45 61.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84393558 - NM_139076 FAM175A 0 . . . 4.76 86.72 23 5.56 Yes 34 0.04 No 0 0 No -22 0.52 No 24 80.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59868138 - NM_032043 BRIP1 0 . . . 2.47 63.16 33 7.02 Yes 14 -2.09 No 0 0 No -35 0.27 No 44 62.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105191967 + NM_021930 RINT1 0 . . . 0.15 0 27 4.03 No 72 -2.42 No 0 0 No -43 0.42 No 55 15.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59863899 - NM_032043 BRIP1 0 . . . 4.35 71.35 10 4.9 No 48 -1.79 No 0 0 No -24 0.76 Yes 48 53.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32975518 + NM_000059 BRCA2 0 . . . 1.01 64.89 22 5.29 No -3 0.37 No 0 0 No -26 0.69 Yes 51 42.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69093176 + NM_133509 RAD51B 0 . . . 3.11 70.54 29 5.66 Yes 11 1.29 Yes 0 0 No -28 0.88 Yes 24 67.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68823935 + NM_133509 RAD51B 0 . . . 1.38 70.76 22 7.07 Yes 36 1.22 Yes 0 0 No -21 0.9 Yes 22 69.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69024925 + NM_133509 RAD51B 0 . . . 2.72 69.09 36 8.93 Yes -2 0.46 No 0 0 No -35 0.66 No 47 88.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68535124 + NM_133509 RAD51B 0 . . . 9.6 87.44 14 8.43 Yes 11 1.25 Yes 0 0 No -21 0.82 Yes 47 82.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68376834 + NM_133509 RAD51B 0 . . . 6.42 72.89 40 7.55 Yes 21 1.12 Yes 0 0 No -37 0.64 No 37 64.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56801898 + NM_058216 RAD51C 0 . . . 4.67 79.28 72 5.92 Yes 28 0.39 No 0 0 No -56 0.37 No 48 51.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59917326 - NM_032043 BRIP1 0 . . . 2.67 71.53 22 5.16 No 61 0.75 No 0 0 No -25 0.61 No 62 46.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69017950 + NM_133509 RAD51B 0 . . . 6.15 83.99 31 6.59 Yes 68 0.48 No 0 0 No -30 0.77 Yes 54 42.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108169666 + NM_000051 ATM 0 . . . 1.47 71.82 18 5.57 Yes 68 -1.6 No 0 0 No -17 0.41 No 53 28.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68942233 + NM_133509 RAD51B 0 . . . 4.87 68.36 22 5.74 Yes 39 -1.49 No 0 0 No -28 0.84 Yes 37 65.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89717995 + NM_000314 PTEN 0 . . . 2.31 85.47 25 5.73 Yes 49 0.66 No 0 0 No -24 0.79 Yes 44 61.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89660653 + NM_000314 PTEN 0 . . . 8.68 79.29 37 5.7 Yes 47 1.32 Yes 0 0 No -22 0.7 Yes 37 79.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190647599 + NM_000534 PMS1 0 . . . 4.71 0 25 5.34 No 59 0.01 No 0 0 No -24 0.96 Yes 40 43.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59835891 - NM_032043 BRIP1 0 . . . 6.41 76.59 21 5.48 No 23 0.46 No 0 0 No -27 0.51 No 34 51.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47764571 + NM_000251 MSH2 0 . . . 2.32 65.88 34 7.29 Yes 21 0.19 No 0 0 No -33 0.76 Yes 37 69.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68408554 + NM_133509 RAD51B 0 . . . 5.09 87.74 31 5.3 No 28 -0.93 No 0 0 No -26 0.36 No 47 84.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32943805 + NM_000059 BRCA2 0 . . . 7.59 88.68 33 5.95 Yes 9 1.35 Yes 0 0 No -32 0.49 No 49 94.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69113162 + NM_133509 RAD51B 0 . . . 5.39 79.93 21 4.58 No 15 0.98 Yes 0 0 No -20 0.55 No 43 95.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59874438 - NM_032043 BRIP1 0 . . . 6.48 80.52 20 5.57 Yes 55 1.5 Yes 0 0 No -19 0.66 No 47 95.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32972231 + NM_000059 BRCA2 0 . . . 1.17 67.34 25 4.12 No 49 -3.78 No 0 0 No -24 0.59 No 37 77.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47790282 + NM_000251 MSH2 0 . . . 0.77 67.17 15 5.5 No 2 1.01 Yes 0 0 No -37 0.45 No 52 79.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215671814 - NM_000465 BARD1 0 . . . 5.87 61.91 32 5.81 Yes 17 0.51 No 0 0 No -31 0.54 No 41 86.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108129492 + NM_000051 ATM 0 . . . 7.22 84.26 17 5.17 No 17 1.44 Yes 0 0 No -46 0.6 No 53 37.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56804344 + NM_058216 RAD51C 0 . . . 1.08 68.06 36 6.86 Yes 52 1.17 Yes 0 0 No -35 0.5 No 48 60.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900053 + NM_133509 RAD51B 0 . . . 5.93 80.06 49 7.2 Yes 47 0.11 No 0 0 No -36 0.78 Yes 42 68.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68940797 + NM_133509 RAD51B 0 . . . 2.77 75.12 19 4.69 No 13 0.58 No 0 0 No -61 0.61 No 45 88.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108206026 + NM_000051 ATM 0 . . . 5.33 74.02 23 5.92 Yes 63 -1.86 No 0 0 No -22 0.46 No 48 50.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59857275 - NM_032043 BRIP1 0 . . . 2.78 84.95 23 4.94 No 61 0.6 No 0 0 No -22 0.68 Yes 44 64.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108113917 + NM_000051 ATM 0 . . . 0.24 66.63 25 5.19 No 8 1 Yes 0 0 No -23 0.32 No 39 73.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47764055 + NM_000251 MSH2 0 . . . 3.04 74.72 21 4.85 No -1 0.25 No 0 0 No -20 0.86 Yes 48 40.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41238267 - NM_007294 BRCA1 0 . . . 3.18 81.25 34 4.87 No 53 1.19 Yes 0 0 No -27 0.75 Yes 48 65.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41271894 - NM_007294 BRCA1 0 . . . 4.65 73.84 26 6.57 Yes 69 0.73 No 0 0 No -26 0.66 No 44 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108113643 + NM_000051 ATM 0 . . . 6.19 76.11 19 4.47 No -3 1.23 Yes 0 0 No -22 0.46 No 55 47.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69071023 + NM_133509 RAD51B 0 . . . 5.82 79.87 19 5.34 No 10 0.48 No 0 0 No -34 0.66 Yes 45 54.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37035368 + NM_000249 MLH1 0 . . . 1.31 0 19 5.48 No 61 1.56 Yes 0 0 No -23 0.54 No 44 56.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7591280 - NM_000546 TP53 0 . . . 2.26 73.44 28 5.2 No 32 0.92 Yes 0 0 No -24 0.48 No 42 51.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68956072 + NM_133509 RAD51B 0 . . . 1.89 66.16 47 7.21 Yes 12 0.01 No 0 0 No -46 0.52 No 46 89.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90955414 - NM_002485 NBN 0 . . . 3.21 68.51 10 3.95 No 52 -5.22 No 0 0 No -31 0.95 Yes 35 83.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68543288 + NM_133509 RAD51B 0 . . . 2.1 70.95 23 6.16 Yes 5 -2.53 No 0 0 No -22 0.73 Yes 59 49.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108170842 + NM_000051 ATM 0 . . . 4.53 68.76 19 3.74 No 69 0.27 No 0 0 No -41 0.73 Yes 48 54.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75505462 - NM_001040108 MLH3 0 . . . 5.23 74.61 32 5.55 No 32 1.16 Yes 0 0 No -24 0.35 No 44 84.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131899329 + NM_005732 RAD50 0 . . . 3.11 0 35 5.54 No 0 0.17 No 0 0 No -22 0.65 No 38 82.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108220361 + NM_000051 ATM 0 . . . 1.87 76.63 28 5.38 No 58 -3.88 No 0 0 No -27 0.6 No 48 85.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52443129 - NM_004656 BAP1 0 . . . 5.46 0 32 5.97 Yes 76 1.37 Yes 0 0 No -31 0.85 Yes 44 89.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68293014 + NM_133509 RAD51B 0 . . . 3.76 73.07 19 4.98 No 44 2.28 Yes 0 0 No -18 0.8 Yes 50 43.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32937776 + NM_000059 BRCA2 0 . . . 3.69 72.88 34 4.79 No -2 0.69 No 0 0 No -26 0.78 Yes 47 88.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37075783 + NM_000249 MLH1 0 . . . 1.06 68.31 35 6.4 Yes 71 -3.89 No 0 0 No -34 0.81 Yes 38 88.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29136776 - NM_001005735 CHEK2 0 . . . 3.41 69.06 19 5.57 Yes 21 1.13 Yes 0 0 No -24 0.72 Yes 24 59.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89696287 + NM_000314 PTEN 0 . . . 6.71 85.04 23 6.16 Yes 5 1.28 Yes 0 0 No -57 0.49 No 37 63.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68541975 + NM_133509 RAD51B 0 . . . 7.5 86.41 17 5.38 No 45 -1.58 No 0 0 No -22 0.61 No 51 49.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68605773 + NM_133509 RAD51B 0 . . . 3.39 74.21 22 4.64 No 11 0.1 No 0 0 No -21 0.48 No 44 51.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108180942 + NM_000051 ATM 0 . . . 0.93 74.13 31 4.05 No 18 1.09 Yes 0 0 No -25 0.48 No 37 89.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89670834 + NM_000314 PTEN 0 . . . 7.53 84.29 21 5.61 Yes 1 1.01 Yes 0 0 No -26 0.41 No 34 48.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108173483 + NM_000051 ATM 0 . . . 4 70.73 30 6.15 Yes -1 0.23 No 0 0 No -29 0.4 No 52 75.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52443736 - NM_004656 BAP1 0 . . . 2.52 69.03 19 3.83 No 45 2.28 Yes 0 0 No -24 0.53 No 13 85.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90962336 - NM_002485 NBN 0 . . . 7.3 75.74 35 6.87 Yes 44 0.41 No 0 0 No -34 0.71 Yes 44 85.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108187762 + NM_000051 ATM 0 . . . 3.41 76.89 45 6.27 Yes 4 1.61 Yes 0 0 No -31 0.73 Yes 42 74.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41273309 - NM_007294 BRCA1 0 . . . 7.49 81.76 19 4.93 No 15 1.03 Yes 0 0 No -23 0.35 No 43 87.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41238524 - NM_007294 BRCA1 0 . . . 0.54 76.06 12 3.71 No 41 0.9 Yes 0 0 No -38 0.61 No 50 67.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108232601 + NM_000051 ATM 0 . . . 3.67 82.91 13 4.41 No 69 -4.61 No 0 0 No -37 0.81 Yes 54 30.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59868373 - NM_032043 BRIP1 0 . . . 0.07 69.86 40 4.57 No 64 0.13 No 0 0 No -34 0.31 No 50 49.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59931520 - NM_032043 BRIP1 0 . . . 3.67 73.43 49 7 Yes 6 1.46 Yes 0 0 No -25 0.45 No 52 72.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152365510 - NM_005431 XRCC2 0 . . . 9.28 83.58 44 4.96 No 36 1.52 Yes 0 0 No -33 0.4 No 46 61.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69132312 + NM_133509 RAD51B 0 . . . 1.81 79.88 11 5.92 Yes 63 -4.11 No 0 0 No -28 0.57 No 47 44.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59867425 - NM_032043 BRIP1 0 . . . 1.7 73.12 25 4.84 No 66 -5.04 No 0 0 No -24 0.72 Yes 46 35.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29098273 - NM_001005735 CHEK2 0 . . . 2.46 77.77 31 5.74 Yes 58 -3.88 No 0 0 No -27 0.69 Yes 48 81.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59766671 - NM_032043 BRIP1 0 . . . 3.89 76.59 19 4.9 No 76 1.51 Yes 0 0 No -21 0.55 No 37 44.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68567442 + NM_133509 RAD51B 0 . . . 4.93 71.6 58 4.55 No 68 0.47 No 0 0 No -30 0.67 Yes 48 78.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59803147 - NM_032043 BRIP1 0 . . . 4.73 84.6 52 7.48 Yes 11 0.86 Yes 0 0 No -23 0.48 No 47 62.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41218474 - NM_007294 BRCA1 0 . . . 2.46 76.63 33 4.35 No 10 0.44 No 0 0 No -20 0.36 No 48 83.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68446380 + NM_133509 RAD51B 0 . . . 7.25 84.84 61 6.74 Yes 70 1.13 Yes 0 0 No -27 0.56 No 43 77.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68561148 + NM_133509 RAD51B 0 . . . 0.59 73.66 22 5.22 No 61 -2.67 No 0 0 No -29 0.91 Yes 49 84.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59900876 - NM_032043 BRIP1 0 . . . 1.28 64.77 9 4.71 No 65 1.55 Yes 0 0 No -32 0.44 No 37 57.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47795876 + NM_000251 MSH2 0 . . . 2.18 72.9 15 4.46 No -2 0.64 No 0 0 No -57 0.44 No 48 57.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94178418 - NM_005591 MRE11 0 . . . 7.48 90.15 15 6.08 Yes 27 0.34 No 0 0 No -22 0.55 No 44 68.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190714725 + NM_000534 PMS1 0 . . . 4.85 81.89 20 5.4 No 22 0.23 No 0 0 No -24 0.86 Yes 51 68.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68797583 + NM_004360 CDH1 0 . . . 2.19 0 15 4.97 No 63 0.14 No 0 0 No -50 0.67 Yes 53 39.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68910718 + NM_133509 RAD51B 0 . . . 5.81 85.66 31 6.89 Yes 6 0.81 Yes 0 0 No -30 0.83 Yes 34 63.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47663050 + NM_000251 MSH2 0 . . . 9.95 80.41 15 4.41 No 53 1.08 Yes 0 0 No -24 0.88 Yes 39 80.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90959415 - NM_002485 NBN 0 . . . 3 76.92 23 5 No 0 1.17 Yes 0 0 No -22 0.97 Yes 46 72.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89644736 + NM_000314 PTEN 0 . . . 0.07 68.55 27 5.2 No 32 0.54 No 0 0 No -24 0.33 No 50 52.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89720321 + NM_000314 PTEN 0 . . . 1.29 61.35 18 4.81 No 35 0.67 No 0 0 No -17 0.54 No 18 27.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68601915 + NM_133509 RAD51B 0 . . . 2.21 73.02 17 4.8 No 23 1.59 Yes 0 0 No -42 0.63 No 35 86.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59832509 - NM_032043 BRIP1 0 . . . 1.11 64.54 24 6.08 Yes 45 2.42 Yes 0 0 No -23 0.45 No 36 67.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21972724 - NM_000077 CDKN2A 0 . . . 1.48 0 48 6.09 Yes 48 0.4 No 0 0 No -22 0.4 No 28 66.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32927826 + NM_000059 BRCA2 0 . . . 2.35 71.63 43 6.44 Yes 27 -2.09 No 0 0 No -42 0.76 Yes 14 30.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68821260 + NM_004360 CDH1 0 . . . 3.26 82.28 30 4.64 No 51 2.06 Yes 0 0 No -25 0.75 Yes 54 64.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68843692 + NM_004360 CDH1 0 . . . 2.41 68.34 23 5.49 No 18 0.37 No 0 0 No -22 0.79 Yes 40 77.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69004720 + NM_133509 RAD51B 0 . . . 4.33 70.59 28 5.34 No 26 0.51 No 0 0 No -20 0.66 No 38 62.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108108119 + NM_000051 ATM 0 . . . 2.4 0 36 5.43 No 12 0.71 No 0 0 No -29 0.76 Yes 46 46.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68789711 + NM_004360 CDH1 0 . . . 6 90.92 27 6.56 Yes 38 1.28 Yes 0 0 No -26 0.8 Yes 20 72.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108155707 + NM_000051 ATM 0 . . . 1.05 83.32 31 6.08 Yes 38 1.46 Yes 0 0 No -30 0.73 Yes 36 79.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33429323 - NM_002878 RAD51D 0 . . . 0.34 53.9 15 5.39 No 63 -2.79 No 0 0 No -22 0.47 No 52 15.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94173829 - NM_005591 MRE11 0 . . . 5.27 70.3 20 4.69 No 28 0.74 No 0 0 No -19 0.81 Yes 16 79.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32892038 + NM_000059 BRCA2 0 . . . 6.17 80.99 17 6.08 Yes 17 0.93 Yes 0 0 No -19 0.61 No 48 59.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105173810 + NM_021930 RINT1 0 . . . 2.41 76.82 35 6.24 Yes 47 -5.15 No 0 0 No -34 0.57 No 41 64.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94174153 - NM_005591 MRE11 0 . . . 4.99 74.26 48 7.4 Yes 30 -2.46 No 0 0 No -47 0.67 Yes 47 88.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68631336 + NM_133509 RAD51B 0 . . . 7.78 79.73 13 4.35 No -1 0.79 Yes 0 0 No -32 0.6 No 45 79.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32912666 + NM_000059 BRCA2 0 . . . 0.71 72.01 37 6.97 Yes 1 0.75 No 0 0 No -36 0.9 Yes 50 81.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6034577 - NM_000535 PMS2 0 . . . 6.52 79.07 14 5.35 No 9 0.79 Yes 0 0 No -25 0.56 No 45 72.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56777836 + NM_058216 RAD51C 0 . . . 0.48 0 28 6.24 Yes 14 0.47 No 0 0 No -27 0.96 Yes 36 53.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47674205 + NM_000251 MSH2 0 . . . 3.23 66.37 17 5.92 Yes 9 0.45 No 0 0 No -47 0.34 No 42 72.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47666311 + NM_000251 MSH2 0 . . . 3.97 78.85 17 5.56 Yes 0 1.23 Yes 0 0 No -16 0.51 No 42 81.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215671545 - NM_000465 BARD1 0 . . . 1.29 73.01 38 6.01 Yes 28 0.71 No 0 0 No -30 0.57 No 54 63.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131910477 + NM_005732 RAD50 0 . . . 1.35 0 15 3.71 No 11 1.32 Yes 0 0 No -30 0.67 Yes 34 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56811995 + NM_058216 RAD51C 0 . . . 4.3 79.41 32 5.72 Yes 40 0.78 Yes 0 0 No -31 0.5 No 18 96.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89682824 + NM_000314 PTEN 0 . . . 1.24 67.11 29 4.33 No 20 1.03 Yes 0 0 No -33 0.74 Yes 44 49.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89691978 + NM_000314 PTEN 0 . . . 0.88 72.21 21 3.89 No 55 -5.57 No 0 0 No -23 0.22 No 52 71.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68703394 + NM_133509 RAD51B 0 . . . 3.99 73.54 30 5.83 Yes 38 -1.55 No 0 0 No -29 0.76 Yes 39 67.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152356252 - NM_005431 XRCC2 0 . . . 5.91 74.27 39 6.81 Yes 38 2.16 Yes 0 0 No -23 0.56 No 31 63.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69060324 + NM_133509 RAD51B 0 . . . 4.95 75.94 44 6.25 Yes 66 -4.05 No 0 0 No -43 0.71 Yes 42 46.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190684172 + NM_000534 PMS1 0 . . . 2.93 0 20 4.12 No 59 0.47 No 0 0 No -34 0.39 No 47 80.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59932746 - NM_032043 BRIP1 0 . . . 1.65 74.73 16 4.66 No 34 1.05 Yes 0 0 No -21 0.63 No 24 72.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68589874 + NM_133509 RAD51B 0 . . . 2.17 73.03 14 4.47 No 16 -1.97 No 0 0 No -56 0.74 Yes 47 41.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47729081 + NM_000251 MSH2 0 . . . 0.98 72.27 25 6.01 Yes 47 1.28 Yes 0 0 No -27 0.53 No 30 89.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108134598 + NM_000051 ATM 0 . . . 1.14 51.55 17 5.48 No 72 -3.74 No 0 0 No -23 0.35 No 46 44.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94200960 - NM_005591 MRE11 0 . . . 1.69 81.34 22 6.85 Yes 4 0.59 No 0 0 No -21 0.97 Yes 50 45.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59808556 - NM_032043 BRIP1 0 . . . 2.73 0 26 5.44 No 64 1.08 Yes 0 0 No -28 0.87 Yes 56 52.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69141919 + NM_133509 RAD51B 0 . . . 1.95 79.1 31 4.52 No -2 -0.89 No 0 0 No -30 0.7 Yes 29 65.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47774164 + NM_000251 MSH2 0 . . . 2.43 67.93 27 4.98 No 20 0.14 No 0 0 No -31 0.43 No 38 58.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68586517 + NM_133509 RAD51B 0 . . . 7.69 77.95 40 5.59 Yes 72 -1.86 No 0 0 No -39 0.63 No 46 63.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89704923 + NM_000314 PTEN 0 . . . 0.01 61.09 44 4.76 No 70 -6.14 No 0 0 No -18 0.57 No 46 21.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59846513 - NM_032043 BRIP1 0 . . . 2.95 78.1 14 5.36 No 59 0 No 0 0 No -25 0.64 No 45 66.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68862573 + NM_004360 CDH1 0 . . . 4.22 78.93 61 7.89 Yes 36 0.93 Yes 0 0 No -29 0.69 Yes 48 91.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94187274 - NM_005591 MRE11 0 . . . 0.94 66.09 18 4.68 No 70 -5.15 No 0 0 No -20 0.57 No 41 73.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108113338 + NM_000051 ATM 0 . . . 2.75 78.24 35 8.71 Yes 4 0.9 Yes 0 0 No -27 0.62 No 54 88.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215655474 - NM_000465 BARD1 0 . . . 3.54 73.02 25 4.99 No 25 0.94 Yes 0 0 No -24 0.85 Yes 50 90.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75515790 - NM_001040108 MLH3 0 . . . 2.99 82.36 17 5.93 Yes 17 1.75 Yes 0 0 No -16 0.71 Yes 41 92.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29130947 - NM_001005735 CHEK2 0 . . . 8.7 83.48 18 4.63 No 17 1.12 Yes 0 0 No -25 0.75 Yes 41 77.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68771472 + NM_004360 CDH1 0 . . . 6.47 76.2 28 5.26 No 8 1.12 Yes 0 0 No -27 0.77 Yes 50 95.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131900766 + NM_005732 RAD50 0 . . . 7.05 75.56 70 7.39 Yes 25 -0.45 No 0 0 No -23 0.89 Yes 43 69.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59905176 - NM_032043 BRIP1 0 . . . 2.91 63.92 25 5.85 Yes -4 0.79 Yes 0 0 No -31 0.51 No 33 56.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59792209 - NM_032043 BRIP1 0 . . . 3.3 77.77 16 4.68 No 75 -5.36 No 0 0 No -37 0.35 No 53 48.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190649767 + NM_000534 PMS1 0 . . . 2.43 72.36 15 3.87 No 57 0.41 No 0 0 No -27 0.58 No 62 34.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52445816 - NM_004656 BAP1 0 . . . 4.16 77.22 20 4.33 No 46 -0.72 No 0 0 No -19 0.83 Yes 44 57.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68886594 + NM_133509 RAD51B 0 . . . 7.31 80.35 33 5.7 Yes 71 -3.93 No 0 0 No -27 0.58 No 36 59.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33442363 - NM_002878 RAD51D 0 . . . 5.42 88.84 21 4.58 No 2 0.51 No 0 0 No -20 0.75 Yes 43 87.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68736470 + NM_133509 RAD51B 0 . . . 3.42 79.85 26 5.94 Yes 39 0.27 No 0 0 No -31 0.84 Yes 19 64.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41019791 + NM_001164269 RAD51 0 . . . 1.05 80.49 43 5.48 No 46 0.68 No 0 0 No -28 0.45 No 44 69.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68828437 + NM_133509 RAD51B 0 . . . 3.89 84 21 4.89 No 62 1.75 Yes 0 0 No -20 0.6 No 16 52.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68793555 + NM_004360 CDH1 0 . . . 0.72 70.23 15 4.58 No 34 -2.12 No 0 0 No -27 0.38 No 48 67.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90967245 - NM_002485 NBN 0 . . . 3.64 76.9 16 4.69 No 2 2.1 Yes 0 0 No -24 0.54 No 14 71.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69082250 + NM_133509 RAD51B 0 . . . 1.27 83.69 12 4.46 No 10 1.1 Yes 0 0 No -44 0.23 No 48 91.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37086886 + NM_000249 MLH1 0 . . . 5.17 83.92 17 5.57 Yes 76 0.78 Yes 0 0 No -24 0.75 Yes 44 75.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75495252 - NM_001040108 MLH3 0 . . . 1.95 74.68 36 5.59 Yes 53 0.08 No 0 0 No -25 0.62 No 47 68.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108228173 + NM_000051 ATM 0 . . . 1.62 66.03 30 4.43 No 37 -4 No 0 0 No -22 0.83 Yes 48 40.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215639216 - NM_000465 BARD1 0 . . . 2.19 76.19 41 6.1 Yes 55 0.8 Yes 0 0 No -27 0.52 No 50 81.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108133403 + NM_000051 ATM 0 . . . 0.46 64.33 27 5.29 No 62 -5.69 No 0 0 No -26 0.75 Yes 32 36.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94221647 - NM_005591 MRE11 0 . . . 7.21 77.92 31 5.32 No 54 0.8 Yes 0 0 No -30 0.9 Yes 37 55.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68859598 + NM_004360 CDH1 0 . . . 5.26 81.63 25 4.89 No 9 0.74 No 0 0 No -24 0.95 Yes 49 82.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68938202 + NM_133509 RAD51B 0 . . . 6.08 72.4 44 6.77 Yes 1 0.91 Yes 0 0 No -24 0.53 No 41 65.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108107960 + NM_000051 ATM 0 . . . 7.58 84.8 74 6.64 Yes 59 0.93 Yes 0 0 No -32 0.61 No 52 34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68675421 + NM_133509 RAD51B 0 . . . 4.52 68.91 36 6.36 Yes 55 0.47 No 0 0 No -22 0.72 Yes 38 64.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68569233 + NM_133509 RAD51B 0 . . . 4.84 72.4 13 4.36 No 11 0.24 No 0 0 No -35 0.7 Yes 38 61.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75481787 - NM_001040108 MLH3 0 . . . 7.36 82.32 41 7.54 Yes 62 -5.63 No 0 0 No -31 0.73 Yes 42 56.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68988496 + NM_133509 RAD51B 0 . . . 1.49 74.29 31 5.48 No -1 -0.98 No 0 0 No -30 0.68 Yes 15 76.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59835972 - NM_032043 BRIP1 0 . . . 4.2 75.92 25 5.18 No 71 0.41 No 0 0 No -24 0.63 No 26 74.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68776170 + NM_133509 RAD51B 0 . . . 6.86 93.4 27 5.38 No 56 0.36 No 0 0 No -29 0.37 No 46 46.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75484241 - NM_001040108 MLH3 0 . . . 1.93 84.41 33 7.18 Yes 5 0.01 No 0 0 No -21 0.28 No 45 63.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215674025 - NM_000465 BARD1 0 . . . 6.99 81.28 23 4.99 No 25 0.13 No 0 0 No -22 0.55 No 33 85.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131954761 + NM_005732 RAD50 0 . . . 5.25 71.22 31 6.23 Yes 73 0.36 No 0 0 No -19 0.67 Yes 27 67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47695603 + NM_000251 MSH2 0 . . . 5.47 71.79 16 5.83 Yes 0 0.34 No 0 0 No -15 0.31 No 40 76.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105193215 + NM_021930 RINT1 0 . . . 2.91 86.79 12 5 No 52 1.46 Yes 0 0 No -32 0.44 No 49 92.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68558224 + NM_133509 RAD51B 0 . . . 0.89 81.23 24 5.13 No 51 0.8 Yes 0 0 No -23 0.86 Yes 34 75.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68505045 + NM_133509 RAD51B 0 . . . 1.6 74.51 21 4.86 No 7 0.02 No 0 0 No -32 0.84 Yes 50 55.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84396321 - NM_139076 FAM175A 0 . . . 0.89 62.24 29 5.29 No 29 0.01 No 0 0 No -28 0.67 Yes 43 31.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48023360 + NM_000179 MSH6 0 . . . 4.55 76.97 41 6.36 Yes 75 0.64 No 0 0 No -35 0.79 Yes 33 44.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68632055 + NM_133509 RAD51B 0 . . . 0.89 62.18 24 5.48 No 73 0.19 No 0 0 No -23 0.75 Yes 37 48.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90952907 - NM_002485 NBN 0 . . . 1.85 0 24 4.88 No 65 1.65 Yes 0 0 No -23 0.71 Yes 20 78.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215670816 - NM_000465 BARD1 0 . . . 4.54 70.68 22 4.35 No 57 -5.23 No 0 0 No -22 0.77 Yes 57 51.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6008563 - NM_000535 PMS2 0 . . . 3.78 76.88 50 5.16 No 64 -5.28 No 0 0 No -31 0.72 Yes 43 58.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40996122 + NM_001164269 RAD51 0 . . . 0.07 87.93 16 3.95 No 11 0.45 No 0 0 No -20 0.45 No 47 62.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68762813 + NM_133509 RAD51B 0 . . . 10.54 85.91 32 4.82 No 11 0.88 Yes 0 0 No -31 0.58 No 47 82.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56775417 + NM_058216 RAD51C 0 . . . 3.13 80.08 24 4.8 No 50 0.04 No 0 0 No -20 0.86 Yes 17 47.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131902657 + NM_005732 RAD50 0 . . . 8.06 89.1 29 6.69 Yes 55 0.98 Yes 0 0 No -36 0.78 Yes 47 83.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37056812 + NM_000249 MLH1 0 . . . 6.92 81.95 29 7.53 Yes 58 0.58 No 0 0 No -28 0.71 Yes 46 63.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68609474 + NM_133509 RAD51B 0 . . . 9.25 76.31 55 7.29 Yes 14 0.7 No 0 0 No -30 0.44 No 44 88.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68881185 + NM_133509 RAD51B 0 . . . 6.73 79 43 5.94 Yes 42 0.4 No 0 0 No -24 0.85 Yes 45 62.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89672820 + NM_000314 PTEN 0 . . . 4.05 87.51 17 3.66 No 8 0.9 Yes 0 0 No -23 0.54 No 50 90.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68338878 + NM_133509 RAD51B 0 . . . 8.28 86.08 10 5.66 Yes 64 -3.88 No 0 0 No -23 0.54 No 51 55.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152363667 - NM_005431 XRCC2 0 . . . 4.35 88.33 20 4.58 No 62 0.42 No 0 0 No -20 0.49 No 43 63.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59846768 - NM_032043 BRIP1 0 . . . 3.07 78.06 26 5.96 Yes -3 1.11 Yes 0 0 No -25 0.58 No 18 51.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68940779 + NM_133509 RAD51B 0 . . . 8.74 82.19 15 3.27 No 75 1 Yes 0 0 No -18 0.25 No 46 89.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68805243 + NM_133509 RAD51B 0 . . . 0.62 0 24 5.5 No 33 -3.4 No 0 0 No -23 0.79 Yes 43 21.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69147228 + NM_133509 RAD51B 0 . . . 6.64 80.3 23 4.88 No 76 1.21 Yes 0 0 No -52 0.59 No 43 36.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59904896 - NM_032043 BRIP1 0 . . . 0.42 74.73 23 4.69 No 34 1.19 Yes 0 0 No -22 0.81 Yes 40 55.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32898963 + NM_000059 BRCA2 0 . . . 3.11 84.79 38 6.62 Yes 2 1.5 Yes 0 0 No -37 0.78 Yes 56 51.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68785510 + NM_004360 CDH1 0 . . . 3.26 70.07 26 5.46 No 62 1.48 Yes 0 0 No -25 0.27 No 39 92.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215648724 - NM_000465 BARD1 0 . . . 3.82 80.57 21 4.47 No 70 1.14 Yes 0 0 No -20 0.71 Yes 44 72.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1213740 + NM_000455 STK11 0 . . . 3.35 67.67 22 4.66 No 69 1.13 Yes 0 0 No -21 0.89 Yes 38 75.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84380246 - NM_139076 FAM175A 0 . . . 0.29 68.25 22 5.29 No 39 0.71 No 0 0 No -45 0.54 No 19 85.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23640896 - NM_024675 PALB2 0 . . . 0.95 62.8 33 6.92 Yes 32 0.27 No 0 0 No -32 0.9 Yes 55 61.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33426713 - NM_002878 RAD51D 0 . . . 6.49 89.86 37 7.35 Yes 44 0.12 No 0 0 No -36 0.96 Yes 48 69.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94219134 - NM_005591 MRE11 0 . . . 2.83 73.91 32 5.08 No 25 -3.36 No 0 0 No -31 0.65 No 37 79.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68730284 + NM_133509 RAD51B 0 . . . 2.24 60.05 32 3.83 No 23 1.18 Yes 0 0 No -18 0.67 Yes 28 46.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75510337 - NM_001040108 MLH3 0 . . . 7.59 91.13 16 5.48 No 38 0.95 Yes 0 0 No -23 0.54 No 44 45.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69114576 + NM_133509 RAD51B 0 . . . 3.45 85.02 28 5.62 Yes 3 1.16 Yes 0 0 No -27 0.74 Yes 41 42.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89701648 + NM_000314 PTEN 0 . . . 1.44 71.87 17 6.07 Yes 13 0.08 No 0 0 No -16 0.38 No 45 78.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59822306 - NM_032043 BRIP1 0 . . . 0.95 62.08 15 4.84 No 32 1 Yes 0 0 No -20 0.29 No 26 92.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32969382 + NM_000059 BRCA2 0 . . . 4.04 73.07 13 4.58 No 15 0.21 No 0 0 No -23 0.57 No 45 65.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59756707 - NM_032043 BRIP1 0 . . . 2.91 66.56 33 6.52 Yes 8 0.23 No 0 0 No -32 0.96 Yes 38 57.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215648214 - NM_000465 BARD1 0 . . . 0.77 71.32 15 4.58 No 41 1.59 Yes 0 0 No -14 0.56 No 17 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21992022 - NM_000077 CDKN2A 0 . . . 0.81 56.54 13 5.83 Yes 40 0.36 No 0 0 No -27 0.82 Yes 42 65.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68888844 + NM_133509 RAD51B 0 . . . 5.35 77.81 27 5.74 Yes 60 0.92 Yes 0 0 No -26 0.47 No 28 61.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75490412 - NM_001040108 MLH3 0 . . . 10.32 93.27 44 5.98 Yes 45 0.31 No 0 0 No -19 0.83 Yes 43 72.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108180794 + NM_000051 ATM 0 . . . 2.91 75.35 18 5.74 Yes 48 0.68 No 0 0 No -26 0.78 Yes 26 51.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21982144 - NM_000077 CDKN2A 0 . . . 3.6 73.57 21 4.99 No 66 -2.92 No 0 0 No -20 0.57 No 38 57.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59879162 - NM_032043 BRIP1 0 . . . 7.15 80.18 20 7.51 Yes 62 1.55 Yes 0 0 No -28 0.64 No 43 69.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69076206 + NM_133509 RAD51B 0 . . . 0.76 71.55 21 7.44 Yes 16 1.66 Yes 0 0 No -20 0.64 No 42 91.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94154948 - NM_005591 MRE11 0 . . . 3.89 78.76 36 5.33 No 7 1.09 Yes 0 0 No -28 0.9 Yes 51 78.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105181976 + NM_021930 RINT1 0 . . . 1.2 74.68 27 5.08 No 34 0.29 No 0 0 No -23 0.43 No 24 61.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21988800 - NM_000077 CDKN2A 0 . . . 1.01 70.67 18 5.39 No 29 1 Yes 0 0 No -22 0.46 No 52 74.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56812527 + NM_058216 RAD51C 0 . . . 4.26 0 15 5.7 Yes 69 0.96 Yes 0 0 No -26 0.58 No 32 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59806026 - NM_032043 BRIP1 0 . . . 5.15 80.97 21 5.1 No 56 1.5 Yes 0 0 No -20 0.65 No 47 60.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68712438 + NM_133509 RAD51B 0 . . . 4.73 68.7 18 5.36 No 47 0.66 No 0 0 No -25 0.43 No 51 81.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215606865 - NM_000465 BARD1 0 . . . 4.92 72.16 32 9.05 Yes 58 -5.67 No 0 0 No -31 0.72 Yes 42 62.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69001475 + NM_133509 RAD51B 0 . . . 10.2 70.67 33 4.68 No 41 0.25 No 0 0 No -32 0.71 Yes 38 82.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56800869 + NM_058216 RAD51C 0 . . . 3.57 70.05 13 4.48 No 0 0.83 Yes 0 0 No -14 0.33 No 41 71.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68858253 + NM_004360 CDH1 0 . . . 0.96 0 17 5.99 Yes 5 0.32 No 0 0 No -26 0.4 No 53 33.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68587099 + NM_133509 RAD51B 0 . . . 1.45 0 11 5.31 No -4 0.42 No 0 0 No -31 0.62 No 27 76.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21983506 - NM_000077 CDKN2A 0 . . . 3.92 78.37 26 4.89 No 25 -3.76 No 0 0 No -25 0.43 No 49 52.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23640961 - NM_024675 PALB2 0 . . . 5.47 80.27 26 5.2 No 62 0.7 No 0 0 No -20 0.49 No 50 81.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47746198 + NM_000251 MSH2 0 . . . 3.09 87.18 36 6.4 Yes 76 -4.87 No 0 0 No -30 0.44 No 52 47.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41004721 + NM_001164269 RAD51 0 . . . 0 0 22 6.06 Yes 21 1.19 Yes 0 0 No -34 0.6 No 37 96.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131896654 + NM_005732 RAD50 0 . . . 6.58 91.2 17 4.69 No 21 1.96 Yes 0 0 No -22 0.69 Yes 33 78.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41258790 - NM_007294 BRCA1 0 . . . 4.35 73.05 20 5.07 No 19 1.15 Yes 0 0 No -19 0.63 No 39 75.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108200348 + NM_000051 ATM 0 . . . 3.57 79.24 20 4.69 No 33 1.21 Yes 0 0 No -19 0.93 Yes 25 79.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68460427 + NM_133509 RAD51B 0 . . . 1.83 60.69 29 4.59 No 15 1.67 Yes 0 0 No -28 0.52 No 39 82.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215590738 - NM_000465 BARD1 0 . . . 3.75 65.53 26 5.49 No 62 0.79 Yes 0 0 No -25 0.43 No 18 94.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40997462 + NM_001164269 RAD51 0 . . . 7.49 83.74 50 6.85 Yes 29 1.62 Yes 0 0 No -25 0.6 No 29 84.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105184033 + NM_021930 RINT1 0 . . . 5.77 72.06 29 4.94 No 49 1.02 Yes 0 0 No -28 0.38 No 36 57.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68774078 + NM_133509 RAD51B 0 . . . 4.07 82.09 26 6.08 Yes 50 1.49 Yes 0 0 No -25 0.82 Yes 56 33.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190736988 + NM_000534 PMS1 0 . . . 1.88 75.48 22 5.29 No 6 -1.37 No 0 0 No -21 0.87 Yes 52 72.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84391128 - NM_139076 FAM175A 0 . . . 1.21 73.48 15 4.8 No 9 0.94 Yes 0 0 No -24 0.51 No 42 56.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32895810 + NM_000059 BRCA2 0 . . . 8.79 77.03 44 7.93 Yes 28 1.77 Yes 0 0 No -26 0.54 No 42 89.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89623611 + NM_000314 PTEN 0 . . . 7.19 81.64 48 8.52 Yes -3 1.46 Yes 0 0 No -47 0.75 Yes 40 74.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68808070 + NM_004360 CDH1 0 . . . 1.22 84.39 19 4.91 No 74 0.64 No 0 0 No -28 0.79 Yes 50 79.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1224659 + NM_000455 STK11 0 . . . 4.88 74.48 73 8.91 Yes 64 1.91 Yes 0 0 No -24 0.6 No 43 43.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33432779 - NM_002878 RAD51D 0 . . . 2.17 67.64 24 5.88 Yes 55 1.38 Yes 0 0 No -23 0.71 Yes 49 34.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89716797 + NM_000314 PTEN 0 . . . 5.92 90.75 54 5.56 Yes 5 0.41 No 0 0 No -29 0.82 Yes 46 92.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68774483 + NM_004360 CDH1 0 . . . 4.48 69.55 49 5.93 Yes 59 -1.98 No 0 0 No -30 0.74 Yes 47 84.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90977027 - NM_002485 NBN 0 . . . 2.43 70.87 22 6.47 Yes 18 0.22 No 0 0 No -21 0.71 Yes 39 70.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68836555 + NM_004360 CDH1 0 . . . 3.6 85.02 12 4.46 No 4 1.2 Yes 0 0 No -19 0.46 No 54 55.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68536753 + NM_133509 RAD51B 0 . . . 2.87 63.92 36 7.32 Yes -4 1.02 Yes 0 0 No -35 0.89 Yes 35 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68889879 + NM_133509 RAD51B 0 . . . 4.92 73.86 21 4.8 No 2 1.06 Yes 0 0 No -20 0.93 Yes 41 63.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68576803 + NM_133509 RAD51B 0 . . . 6.45 88.66 31 6.46 Yes 65 -5.16 No 0 0 No -30 0.62 No 49 73.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68824613 + NM_133509 RAD51B 0 . . . 4.58 76.68 27 5.39 No 5 1.02 Yes 0 0 No -26 0.76 Yes 49 88.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29131149 - NM_001005735 CHEK2 0 . . . 6.54 73.91 23 6.93 Yes 21 1.78 Yes 0 0 No -29 0.41 No 42 94.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68351227 + NM_133509 RAD51B 0 . . . 3.82 80.32 38 7.75 Yes 2 1.56 Yes 0 0 No -23 0.42 No 51 77.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89688730 + NM_000314 PTEN 0 . . . 1.87 81.36 53 6.42 Yes 38 1.02 Yes 0 0 No -22 0.52 No 33 49.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68792567 + NM_133509 RAD51B 0 . . . 8 75.57 19 4.9 No 8 2.14 Yes 0 0 No -21 0.48 No 50 81.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215638663 - NM_000465 BARD1 0 . . . 1.25 74.91 24 4.8 No 48 -3.76 No 0 0 No -50 0.64 No 50 78.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131979955 + NM_005732 RAD50 0 . . . 3.46 77.33 20 5.36 No 11 0.43 No 0 0 No -33 0.17 No 47 90.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89629683 + NM_000314 PTEN 0 . . . 3.51 0 39 7.14 Yes 40 0.54 No 0 0 No -27 0.71 Yes 40 56.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6043970 - NM_000535 PMS2 0 . . . 1.34 75.24 35 4.77 No 58 0.37 No 0 0 No -35 0.43 No 48 59.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68660519 + NM_133509 RAD51B 0 . . . 2.77 68.35 32 5.66 Yes 74 1.13 Yes 0 0 No -31 0.71 Yes 51 76.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68545828 + NM_133509 RAD51B 0 . . . 7.06 76.68 12 5 No 25 0.93 Yes 0 0 No -47 0.7 Yes 33 93.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68807835 + NM_133509 RAD51B 0 . . . 1.5 55.12 27 5.99 Yes 68 0.31 No 0 0 No -22 0.65 No 57 54.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68960526 + NM_133509 RAD51B 0 . . . 0.62 0 19 4.36 No 4 -1.39 No 0 0 No -34 0.36 No 51 46.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94228569 - NM_005591 MRE11 0 . . . 0.89 0 53 7.06 Yes 17 2.05 Yes 0 0 No -23 0.87 Yes 41 62.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32894960 + NM_000059 BRCA2 0 . . . 0.61 67.19 28 4.72 No 0 0.34 No 0 0 No -30 0.57 No 58 53.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105198437 + NM_021930 RINT1 0 . . . 0.41 60.38 22 5.72 Yes 44 0.65 No 0 0 No -21 0.79 Yes 40 32.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079396 + NM_000249 MLH1 0 . . . 3 67.14 16 5.47 No 13 1.04 Yes 0 0 No -23 0.81 Yes 32 91.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41273616 - NM_007294 BRCA1 0 . . . 1.1 66.46 16 4.6 No 16 0.76 No 0 0 No -21 0.44 No 42 84.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47742658 + NM_000251 MSH2 0 . . . 0.65 76.34 19 4.86 No 44 -4.7 No 0 0 No -29 0.63 No 52 48.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69131678 + NM_133509 RAD51B 0 . . . 0.68 73.51 24 4.32 No 35 1.07 Yes 0 0 No -19 0.79 Yes 36 51.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68328224 + NM_133509 RAD51B 0 . . . 0 71.59 32 5.09 No 35 0.55 No 0 0 No -26 0.43 No 23 16.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89631209 + NM_000314 PTEN 0 . . . 4.8 80.35 26 5.63 Yes 8 0.73 No 0 0 No -25 0.84 Yes 41 39.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21966067 - NM_000077 CDKN2A 0 . . . 3.4 0 18 5.29 No 56 0.86 Yes 0 0 No -26 0.63 No 22 78.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68461771 + NM_133509 RAD51B 0 . . . 3.91 67.88 17 6.65 Yes 19 0.6 No 0 0 No -42 0.48 No 36 88.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47688917 + NM_000251 MSH2 0 . . . 7.28 85.02 22 4.69 No 30 1.99 Yes 0 0 No -21 0.96 Yes 28 95.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190712980 + NM_000534 PMS1 0 . . . 4.39 68.92 10 4 No 20 0.46 No 0 0 No -26 0.88 Yes 49 60.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68836401 + NM_133509 RAD51B 0 . . . 6.19 73.16 20 4.87 No 30 0.66 No 0 0 No -19 0.57 No 48 68.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69096463 + NM_133509 RAD51B 0 . . . 3.59 83.22 28 5.13 No 59 1.04 Yes 0 0 No -27 0.54 No 40 52.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68691591 + NM_133509 RAD51B 0 . . . 2.62 81.43 23 6.28 Yes 3 1.01 Yes 0 0 No -22 0.59 No 55 69.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59831122 - NM_032043 BRIP1 0 . . . 1.73 0 13 4.74 No 64 -0.85 No 0 0 No -56 0.56 No 42 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48026170 + NM_000179 MSH6 0 . . . 0.86 70.04 13 5.33 No -3 0.37 No 0 0 No -19 0.47 No 33 43.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68779839 + NM_004360 CDH1 0 . . . 0.16 83.85 19 4.92 No -3 0.62 No 0 0 No -29 0.32 No 50 74.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131931868 + NM_005732 RAD50 0 . . . 5.35 78.95 29 5.92 Yes 5 0.92 Yes 0 0 No -24 0.51 No 53 78.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47646719 + NM_000251 MSH2 0 . . . 6.39 90.88 25 5.91 Yes 1 1.17 Yes 0 0 No -25 0.6 No 43 87.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41003135 + NM_001164269 RAD51 0 . . . 6.2 81.29 18 5.43 No 31 -2.07 No 0 0 No -27 0.57 No 47 37.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21991904 - NM_000077 CDKN2A 0 . . . 7.5 84.53 21 5.56 Yes 10 0.59 No 0 0 No -28 0.4 No 48 93.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104180798 - NM_001100119 XRCC3 0 . . . 7.82 86.43 22 6.44 Yes 57 -1.05 No 0 0 No -21 0.96 Yes 40 75.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40996912 + NM_001164269 RAD51 0 . . . 6.89 86.85 19 3.48 No 33 1.46 Yes 0 0 No -24 0.59 No 25 80.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131946501 + NM_005732 RAD50 0 . . . 0.21 71.27 25 4.49 No 33 -3.51 No 0 0 No -24 0.55 No 48 42.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41006628 + NM_001164269 RAD51 0 . . . 1.16 69.25 38 7.09 Yes 74 1.34 Yes 0 0 No -21 0.59 No 52 65.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68713555 + NM_133509 RAD51B 0 . . . 4.24 71.93 15 4.58 No 13 0.24 No 0 0 No -35 0.42 No 44 69.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131906126 + NM_005732 RAD50 0 . . . 1.79 0 42 6.77 Yes 34 0.93 Yes 0 0 No -20 0.73 Yes 45 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89694987 + NM_000314 PTEN 0 . . . 4.14 79.85 26 4.96 No 4 0.33 No 0 0 No -26 0.47 No 50 73.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68712655 + NM_133509 RAD51B 0 . . . 5.3 83.36 13 5.08 No -4 0.23 No 0 0 No -22 0.76 Yes 53 77.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41238957 - NM_007294 BRCA1 0 . . . 0.45 68.79 19 3.5 No 30 0.49 No 0 0 No -23 0.75 Yes 28 54.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131942802 + NM_005732 RAD50 0 . . . 4.67 66.2 15 4.82 No 9 0.36 No 0 0 No -58 0.7 Yes 46 61.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69040689 + NM_133509 RAD51B 0 . . . 2.19 64.8 35 4.83 No 25 1.46 Yes 0 0 No -28 0.77 Yes 29 95.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68785424 + NM_004360 CDH1 0 . . . 6.88 81.27 16 4.69 No 22 0.89 Yes 0 0 No -48 0.24 No 48 88.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68583715 + NM_133509 RAD51B 0 . . . 0.31 0 34 6.07 Yes 51 1.22 Yes 0 0 No -26 0.51 No 52 42.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47749589 + NM_000251 MSH2 0 . . . 8.42 97.47 18 5.39 No 3 1.18 Yes 0 0 No -26 0.36 No 42 67.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69106931 + NM_133509 RAD51B 0 . . . 0.28 57.29 23 5.71 Yes 59 1.63 Yes 0 0 No -26 0.81 Yes 41 83.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68821116 + NM_133509 RAD51B 0 . . . 0.38 78.28 35 7.35 Yes 5 0.94 Yes 0 0 No -34 0.53 No 53 68.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190688540 + NM_000534 PMS1 0 . . . 6.9 83.14 20 4.36 No 5 0.55 No 0 0 No -46 0.51 No 46 34.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215676000 - NM_000465 BARD1 0 . . . 0.41 0 32 6.92 Yes 51 -2.1 No 0 0 No -26 0.57 No 35 64.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47741617 + NM_000251 MSH2 0 . . . 2.65 73.46 20 6.96 Yes 66 1.85 Yes 0 0 No -19 0.46 No 42 49.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68731107 + NM_133509 RAD51B 0 . . . 0.43 65.33 32 5.68 Yes 0 0.93 Yes 0 0 No -31 0.65 No 18 35.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215652489 - NM_000465 BARD1 0 . . . 8.67 84.66 14 5 No 8 1.56 Yes 0 0 No -25 0.24 No 50 64.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47697072 + NM_000251 MSH2 0 . . . 1.44 71.65 13 5.57 Yes 55 0.44 No 0 0 No -24 0.65 No 44 83.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41201472 - NM_007294 BRCA1 0 . . . 7.67 83.21 31 7.21 Yes 6 0.65 No 0 0 No -30 0.91 Yes 45 72.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37082814 + NM_000249 MLH1 0 . . . 11.26 93.27 25 3.93 No 44 0.71 No 0 0 No -24 0.88 Yes 45 70.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68617528 + NM_133509 RAD51B 0 . . . 0.47 0 20 4.77 No 67 1.52 Yes 0 0 No -19 0.93 Yes 51 79.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68547380 + NM_133509 RAD51B 0 . . . 1.49 63.37 26 4.9 No 48 0.8 Yes 0 0 No -30 0.46 No 10 40.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68851820 + NM_004360 CDH1 0 . . . 2.4 67.04 10 4.66 No 22 -1.13 No 0 0 No -20 0.27 No 36 75.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47631202 + NM_000251 MSH2 0 . . . 6.37 86.15 37 6.56 Yes 8 0.78 Yes 0 0 No -36 0.83 Yes 37 80.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108142389 + NM_000051 ATM 0 . . . 1.42 70.96 24 4.67 No 37 1.18 Yes 0 0 No -23 0.94 Yes 47 54.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68826402 + NM_133509 RAD51B 0 . . . 3.48 74.13 31 5.76 Yes 30 0.46 No 0 0 No -30 0.63 No 45 63.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68489003 + NM_133509 RAD51B 0 . . . 4 63.81 28 5.29 No 68 0.69 No 0 0 No -27 0.75 Yes 40 45.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41236449 - NM_007294 BRCA1 0 . . . 1.5 77.18 58 8 Yes 8 1.49 Yes 0 0 No -32 0.62 No 50 67.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37061587 + NM_000249 MLH1 0 . . . 0.78 69.07 20 5.1 No 17 0.67 No 0 0 No -28 0.36 No 41 73.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105186154 + NM_021930 RINT1 0 . . . 2 85.02 24 6.03 Yes 18 0.57 No 0 0 No -23 0.91 Yes 53 60.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37041769 + NM_000249 MLH1 0 . . . 1.15 62.17 14 6.24 Yes 75 -6.07 No 0 0 No -18 0.17 No 41 50.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68627217 + NM_133509 RAD51B 0 . . . 0.57 61.17 16 4.71 No 67 0.87 Yes 0 0 No -23 0.81 Yes 35 67.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59845057 - NM_032043 BRIP1 0 . . . 0.54 74.23 14 4.47 No 8 1.73 Yes 0 0 No -22 0.23 No 54 63.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47636997 + NM_000251 MSH2 0 . . . 5.6 79.62 19 7.75 Yes 53 0.64 No 0 0 No -32 0.47 No 37 63.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69146386 + NM_133509 RAD51B 0 . . . 5.69 81.37 23 3.89 No 51 0.96 Yes 0 0 No -41 0.59 No 31 69.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56804530 + NM_058216 RAD51C 0 . . . 6.52 93.38 14 4.9 No 33 0.61 No 0 0 No -49 0.39 No 22 92.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68617516 + NM_133509 RAD51B 0 . . . 4.42 80.29 47 6.72 Yes 55 1.53 Yes 0 0 No -26 0.82 Yes 43 90.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89629284 + NM_000314 PTEN 0 . . . 1.58 70.47 43 6.89 Yes 51 0.77 Yes 0 0 No -42 0.45 No 51 47.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56785980 + NM_058216 RAD51C 0 . . . 4.68 63.05 25 5.2 No 55 0.64 No 0 0 No -24 0.93 Yes 36 84.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59807277 - NM_032043 BRIP1 0 . . . 0.49 0 9 4.53 No 35 0.93 Yes 0 0 No -25 0.84 Yes 51 76.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69092698 + NM_133509 RAD51B 0 . . . 0.7 57.24 24 4.19 No 32 0.05 No 0 0 No -23 0.55 No 26 62.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59786544 - NM_032043 BRIP1 0 . . . 0.26 64.32 30 5.9 Yes 66 -4.88 No 0 0 No -34 0.45 No 45 53.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89634052 + NM_000314 PTEN 0 . . . 2.25 79 16 4.3 No 50 1.49 Yes 0 0 No -20 0.51 No 47 37.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23617490 - NM_024675 PALB2 0 . . . 3.76 74.03 42 4.46 No 62 -2.56 No 0 0 No -19 0.43 No 41 83.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68742475 + NM_133509 RAD51B 0 . . . 4.82 76.77 21 5.66 Yes 12 1.2 Yes 0 0 No -25 0.45 No 46 75.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68296587 + NM_133509 RAD51B 0 . . . 0.67 71.95 32 5.51 No 0 0.23 No 0 0 No -34 0.45 No 43 45.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41198930 - NM_007294 BRCA1 0 . . . 4.34 78.88 27 5.11 No 49 0.73 No 0 0 No -26 0.95 Yes 41 82.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68945215 + NM_133509 RAD51B 0 . . . 0.87 0 21 5.04 No 76 0.27 No 0 0 No -34 0.51 No 54 49.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68360950 + NM_133509 RAD51B 0 . . . 4.66 87.3 40 6.04 Yes 64 1.22 Yes 0 0 No -23 0.8 Yes 46 53.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190729767 + NM_000534 PMS1 0 . . . 3.79 60.07 27 4.54 No 39 0.23 No 0 0 No -26 0.75 Yes 40 79.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90972767 - NM_002485 NBN 0 . . . 2.5 66.72 19 4.45 No 44 0.77 No 0 0 No -21 0.88 Yes 39 41.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89671661 + NM_000314 PTEN 0 . . . 1.93 75.61 45 7.14 Yes 51 0.76 No 0 0 No -38 0.51 No 43 58.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59805659 - NM_032043 BRIP1 0 . . . 1.6 74.78 11 4.12 No 49 0.31 No 0 0 No -25 0.57 No 36 58.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89659659 + NM_000314 PTEN 0 . . . 7.16 80.98 19 5.55 No 61 -2.05 No 0 0 No -29 0.45 No 43 82.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84402490 - NM_139076 FAM175A 0 . . . 1.67 70.75 35 5.28 No 44 0.45 No 0 0 No -34 0.49 No 14 41.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56778749 + NM_058216 RAD51C 0 . . . 0.31 61.05 21 5.29 No 56 1.18 Yes 0 0 No -24 0.6 No 42 51.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90968760 - NM_002485 NBN 0 . . . 6.46 69.76 12 6.07 Yes 49 0.89 Yes 0 0 No -32 0.49 No 44 49.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68388702 + NM_133509 RAD51B 0 . . . 3.16 86.05 16 8.59 Yes 14 0.85 Yes 0 0 No -27 0.46 No 47 59.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131913300 + NM_005732 RAD50 0 . . . 3.66 70.37 44 6.82 Yes 51 0.56 No 0 0 No -23 0.96 Yes 41 45.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47699490 + NM_000251 MSH2 0 . . . 5.7 82.59 32 5.99 Yes 22 1.02 Yes 0 0 No -31 0.93 Yes 41 63.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68665753 + NM_133509 RAD51B 0 . . . 1.53 0 28 5.09 No 76 0.88 Yes 0 0 No -27 0.84 Yes 27 41.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32938072 + NM_000059 BRCA2 0 . . . 3.15 70.37 54 7.01 Yes 34 0.34 No 0 0 No -29 0.63 No 24 85.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29081971 - NM_001005735 CHEK2 0 . . . 3.6 85.02 27 5.19 No 4 1.05 Yes 0 0 No -26 0.83 Yes 54 74.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94184205 - NM_005591 MRE11 0 . . . 1.38 70.85 22 6.2 Yes 4 1.69 Yes 0 0 No -21 0.78 Yes 40 74.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69074399 + NM_133509 RAD51B 0 . . . 2.32 68.6 18 4.69 No 65 -1.78 No 0 0 No -17 0.83 Yes 23 68.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108147338 + NM_000051 ATM 0 . . . 6.28 90.91 18 4.9 No 27 1.7 Yes 0 0 No -17 0.71 Yes 36 75.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108105759 + NM_000051 ATM 0 . . . 1.83 70.35 19 6.22 Yes 67 0.81 Yes 0 0 No -29 0.59 No 45 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131972219 + NM_005732 RAD50 0 . . . 1.04 61.72 15 5.11 No 10 1.09 Yes 0 0 No -26 0.6 No 39 73.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47629369 + NM_000251 MSH2 0 . . . 3.23 70.91 29 6.41 Yes 39 0.01 No 0 0 No -28 0.8 Yes 43 36.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108222663 + NM_000051 ATM 0 . . . 0.83 75.85 14 4.91 No 58 2.61 Yes 0 0 No -19 0.68 Yes 21 37.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68769069 + NM_133509 RAD51B 0 . . . 1.74 78.39 32 5.64 Yes 45 -2.2 No 0 0 No -29 0.64 No 41 78.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69116860 + NM_133509 RAD51B 0 . . . 0.73 64.58 16 5.57 Yes 9 1.49 Yes 0 0 No -20 0.84 Yes 38 68.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41253611 - NM_007294 BRCA1 0 . . . 2.73 74.89 26 4.82 No 62 -5.15 No 0 0 No -25 0.78 Yes 12 21.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68793964 + NM_133509 RAD51B 0 . . . 2.84 74.68 33 5.58 Yes 74 0.41 No 0 0 No -25 0.51 No 46 86.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89684480 + NM_000314 PTEN 0 . . . 5.75 75.7 11 4.12 No 76 1.88 Yes 0 0 No -28 0.72 Yes 45 62.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32920689 + NM_000059 BRCA2 0 . . . 2.71 75.94 28 5.78 Yes 44 0.74 No 0 0 No -33 0.53 No 44 83.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32907708 + NM_000059 BRCA2 0 . . . 1.27 61.81 20 7.86 Yes 43 0.1 No 0 0 No -19 0.72 Yes 59 54.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68311809 + NM_133509 RAD51B 0 . . . 1.04 62.35 33 5.3 No 36 1.25 Yes 0 0 No -31 0.6 No 33 52.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215637771 - NM_000465 BARD1 0 . . . 5.12 87.26 19 5 No 60 0.13 No 0 0 No -18 0.65 No 48 67.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68649865 + NM_133509 RAD51B 0 . . . 2.24 61.42 36 6.16 Yes 1 0.32 No 0 0 No -25 0.78 Yes 57 36.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41263436 - NM_007294 BRCA1 0 . . . 0.24 81.86 32 4.81 No 76 1.42 Yes 0 0 No -26 0.67 Yes 25 58.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47742360 + NM_000251 MSH2 0 . . . 0.2 67.59 22 5.29 No 44 0.4 No 0 0 No -47 0.47 No 52 63.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104181154 - NM_001100119 XRCC3 0 . . . 1.61 74.68 32 5.4 No 53 0.63 No 0 0 No -31 0.76 Yes 52 62.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68787294 + NM_004360 CDH1 0 . . . 5.08 87.07 34 4.95 No 40 1.04 Yes 0 0 No -33 0.68 Yes 17 48.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59816472 - NM_032043 BRIP1 0 . . . 9.65 82.73 21 5.9 Yes 72 1.04 Yes 0 0 No -20 0.48 No 40 45.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41261695 - NM_007294 BRCA1 0 . . . 4.54 68.68 16 7.14 Yes 13 1.11 Yes 0 0 No -31 0.73 Yes 45 56.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68522970 + NM_133509 RAD51B 0 . . . 5.59 88.29 22 5.84 Yes 9 1.06 Yes 0 0 No -21 0.93 Yes 49 96.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75502058 - NM_001040108 MLH3 0 . . . 1.87 80.12 23 6.23 Yes 6 0.99 Yes 0 0 No -22 0.89 Yes 52 67.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68677994 + NM_133509 RAD51B 0 . . . 5.41 77.54 32 4.41 No 57 1.79 Yes 0 0 No -21 0.64 No 45 41.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68794778 + NM_004360 CDH1 0 . . . 3.65 75.59 32 6.56 Yes 56 -4.42 No 0 0 No -31 0.89 Yes 40 44.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6038663 - NM_000535 PMS2 0 . . . 6.41 75.42 27 5.74 Yes 48 0.23 No 0 0 No -31 0.47 No 42 84.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37037962 + NM_000249 MLH1 0 . . . 2.13 70.45 12 6.45 Yes 62 1.2 Yes 0 0 No -21 0.72 Yes 47 92.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47650423 + NM_000251 MSH2 0 . . . 6.75 81.32 10 4.45 No 6 1.25 Yes 0 0 No -42 0.58 No 52 86.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32942809 + NM_000059 BRCA2 0 . . . 2.87 0 17 4.8 No 72 0.8 Yes 0 0 No -19 0.37 No 45 53.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190725523 + NM_000534 PMS1 0 . . . 1.05 83.43 36 9.52 Yes 8 1.03 Yes 0 0 No -35 0.86 Yes 43 63.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94184342 - NM_005591 MRE11 0 . . . 5.2 0 33 4.65 No 41 0.69 No 0 0 No -20 0.62 No 40 78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68860925 + NM_004360 CDH1 0 . . . 0.36 74.68 25 4.42 No 4 0.41 No 0 0 No -24 0.75 Yes 54 72.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68298471 + NM_133509 RAD51B 0 . . . 2.62 80.1 9 4.47 No 40 1.25 Yes 0 0 No -28 0.69 Yes 18 87.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75493939 - NM_001040108 MLH3 0 . . . 3.24 76.1 37 4.41 No 3 0.41 No 0 0 No -25 0.73 Yes 52 48.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68888678 + NM_133509 RAD51B 0 . . . 8.41 82.93 23 5.91 Yes 10 0.23 No 0 0 No -22 0.87 Yes 48 97.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68417291 + NM_133509 RAD51B 0 . . . 3.25 82.17 29 5.93 Yes 8 0.5 No 0 0 No -28 0.83 Yes 46 60.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94179679 - NM_005591 MRE11 0 . . . 5.14 85.58 34 6 Yes 55 -5.64 No 0 0 No -33 0.96 Yes 50 57.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89695477 + NM_000314 PTEN 0 . . . 7.35 87.25 30 5.16 No 9 1.19 Yes 0 0 No -24 0.62 No 49 71.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68784765 + NM_133509 RAD51B 0 . . . 3.74 77.03 21 4.63 No 24 0.83 Yes 0 0 No -20 0.56 No 39 66.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108151997 + NM_000051 ATM 0 . . . 0.32 0 26 5.1 No 10 0.77 Yes 0 0 No -25 0.74 Yes 58 61.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68349248 + NM_133509 RAD51B 0 . . . 4.8 74.74 19 5.45 No 8 1.15 Yes 0 0 No -23 0.55 No 50 61.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104175109 - NM_001100119 XRCC3 0 . . . 8.62 82.32 24 4.29 No NA NA NA 0 0 No -20 0.53 No 53 44.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215601938 - NM_000465 BARD1 0 . . . 5.95 86.16 23 5.07 No 13 1.05 Yes 0 0 No -22 0.81 Yes 45 94.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56812402 + NM_058216 RAD51C 0 . . . 2.01 62.76 43 7 Yes 35 0.17 No 0 0 No -22 0.51 No 54 60.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69027569 + NM_133509 RAD51B 0 . . . 2.78 70.39 27 5.74 Yes 74 2.42 Yes 0 0 No -26 0.84 Yes 40 83.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37065779 + NM_000249 MLH1 0 . . . 3.77 83.07 26 5.48 No 37 0.49 No 0 0 No -23 0.67 Yes 21 73.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131938339 + NM_005732 RAD50 0 . . . 6.4 83.67 50 5.38 No 20 0.3 No 0 0 No -30 0.78 Yes 51 31.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89663775 + NM_000314 PTEN 0 . . . 2.64 0 44 7 Yes 37 0.79 Yes 0 0 No -42 0.33 No 37 75.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48011472 + NM_000179 MSH6 0 . . . 4.77 67.27 16 4.69 No -3 -1.76 No 0 0 No -48 0.46 No 41 76.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47806357 + NM_000251 MSH2 0 . . . 2.37 69.12 26 5.45 No 43 0.65 No 0 0 No -25 0.65 No 47 81.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68738483 + NM_133509 RAD51B 0 . . . 1.21 62.54 12 5.52 No 40 -4.21 No 0 0 No -25 0.64 No 45 32.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94151118 - NM_005591 MRE11 0 . . . 3.01 72.1 47 6.91 Yes 40 -1.72 No 0 0 No -28 0.89 Yes 43 87.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105171887 + NM_021930 RINT1 0 . . . 3.32 68.7 32 5.7 Yes 73 1.02 Yes 0 0 No -29 0.81 Yes 43 64.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215597591 - NM_000465 BARD1 0 . . . 3.22 67.65 22 6.13 Yes 75 0.75 No 0 0 No -24 0.52 No 22 55.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94178307 - NM_005591 MRE11 0 . . . 5.09 78.51 21 5.73 Yes 75 -2.21 No 0 0 No -20 0.39 No 35 76.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215624005 - NM_000465 BARD1 0 . . . 3.53 68.86 41 4.27 No 27 1.15 Yes 0 0 No -26 0.79 Yes 31 79.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108201674 + NM_000051 ATM 0 . . . 3.6 65.04 26 5.34 No 31 -2.96 No 0 0 No -25 0.96 Yes 49 72.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94197966 - NM_005591 MRE11 0 . . . 4.87 85.29 21 6.78 Yes 9 0.25 No 0 0 No -20 0.96 Yes 48 63.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68725356 + NM_133509 RAD51B 0 . . . 5.66 68.39 21 5.01 No 21 0.27 No 0 0 No -20 0.49 No 37 85.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41011300 + NM_001164269 RAD51 0 . . . 6.29 90.14 24 5.44 No 58 0.3 No 0 0 No -29 0.74 Yes 21 70.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59939892 - NM_032043 BRIP1 0 . . . 6.12 72.76 28 5.74 Yes 69 -1.91 No 0 0 No -27 0.91 Yes 39 85.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69063508 + NM_133509 RAD51B 0 . . . 4.17 76.56 21 3.42 No 41 0.87 Yes 0 0 No -20 0.86 Yes 44 59.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75497731 - NM_001040108 MLH3 0 . . . 5.79 74.36 16 5.23 No 25 0.93 Yes 0 0 No -20 0.4 No 46 53.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94183967 - NM_005591 MRE11 0 . . . 3.94 70.09 23 5.55 No 49 1.7 Yes 0 0 No -22 0.72 Yes 34 68.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131924337 + NM_005732 RAD50 0 . . . 3.57 73.52 27 5.2 No -1 0.72 No 21 0.67 Yes -26 0.62 No 50 84.43 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr2 47754791 + NM_000251 MSH2 0 . . . 4.53 74.59 22 5.29 No 34 1.4 Yes 0 0 No -21 0.7 Yes 24 89.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104180239 - NM_001100119 XRCC3 0 . . . 1.53 62.18 17 4.69 No 11 -1.05 No 0 0 No -19 0.52 No 47 71.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47657701 + NM_000251 MSH2 0 . . . 3.01 83.11 25 5.54 No 53 -4.1 No 0 0 No -22 0.3 No 51 76.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69018036 + NM_133509 RAD51B 0 . . . 4.72 81.42 29 5.31 No 71 1.35 Yes 0 0 No -28 0.69 Yes 49 50.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69111218 + NM_133509 RAD51B 0 . . . 4.51 84.28 20 4.58 No 66 -3.87 No 0 0 No -45 0.51 No 53 70.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94150929 - NM_005591 MRE11 0 . . . 2.59 72.44 21 4.9 No 39 1.32 Yes 0 0 No -44 0.94 Yes 39 63.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69058322 + NM_133509 RAD51B 0 . . . 6.24 84.61 17 3.19 No 23 1.89 Yes 0 0 No -25 0.61 No 35 90.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1206579 + NM_000455 STK11 0 . . . 6.46 80.02 21 4.97 No 58 0.64 No 0 0 No -20 0.63 No 46 64.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23646456 - NM_024675 PALB2 0 . . . 3.21 73.63 34 5.83 Yes 72 -5.66 No 0 0 No -27 0.37 No 43 43.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59937578 - NM_032043 BRIP1 0 . . . 0.28 74.57 28 4.7 No 25 0.87 Yes 0 0 No -28 0.49 No 48 52.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41261636 - NM_007294 BRCA1 0 . . . 2.12 0 28 7.04 Yes 72 1.07 Yes 0 0 No -27 0.93 Yes 47 39.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68784002 + NM_133509 RAD51B 0 . . . 2.22 0 35 5.51 No 46 0.82 Yes 0 0 No -34 0.23 No 56 27.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68563994 + NM_133509 RAD51B 0 . . . 3.79 76.97 48 7.79 Yes 8 0.48 No 0 0 No -32 0.55 No 37 74.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47663827 + NM_000251 MSH2 0 . . . 5.71 77.1 28 6.31 Yes 11 0.39 No 0 0 No -25 0.47 No 47 42.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68775981 + NM_133509 RAD51B 0 . . . 1.17 61.9 23 5.8 Yes 38 1.04 Yes 0 0 No -22 0.93 Yes 40 49.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131977747 + NM_005732 RAD50 0 . . . 9.52 90.47 25 4.97 No 20 0.39 No 0 0 No -24 0.85 Yes 38 65.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6026788 - NM_000535 PMS2 0 . . . 1.15 78.75 15 7.19 Yes 56 -0.56 No 0 0 No -35 0.44 No 48 57.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69117286 + NM_133509 RAD51B 0 . . . 4.45 72.32 30 5.67 Yes 12 0.65 No 0 0 No -30 0.49 No 46 86.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23629626 - NM_024675 PALB2 0 . . . 5.25 83.97 29 5.21 No 64 -3.75 No 0 0 No -22 0.92 Yes 48 30.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59934708 - NM_032043 BRIP1 0 . . . 1.21 72 17 5.57 Yes 68 0.12 No 0 0 No -24 0.7 Yes 50 50.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68767204 + NM_133509 RAD51B 0 . . . 2.98 80.49 28 5.32 No 46 0.7 No 0 0 No -42 0.69 Yes 26 75.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94159014 - NM_005591 MRE11 0 . . . 7.84 0 45 8.31 Yes 1 1.17 Yes 0 0 No -44 0.46 No 38 62.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94176497 - NM_005591 MRE11 0 . . . 0.79 75.07 27 5.2 No 69 0.37 No 0 0 No -20 0.59 No 46 97.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59923885 - NM_032043 BRIP1 0 . . . 2.07 67.25 30 5.09 No 16 -2.16 No 0 0 No -34 0.64 No 43 67.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108236319 + NM_000051 ATM 0 . . . 0.41 63.07 32 5.74 Yes 55 1.03 Yes 0 0 No -31 0.43 No 50 57.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215655977 - NM_000465 BARD1 0 . . . 3.65 77.47 14 4.47 No 10 0.56 No 0 0 No -26 0.25 No 48 96.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105206856 + NM_021930 RINT1 0 . . . 0.87 76.16 53 8.34 Yes 76 0.71 No 0 0 No -27 0.69 Yes 49 84.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23630284 - NM_024675 PALB2 0 . . . 9.47 81.72 27 5.34 No 64 0.86 Yes 0 0 No -23 0.3 No 43 80.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32954860 + NM_000059 BRCA2 0 . . . 4.9 85.02 24 5.55 No 72 0.91 Yes 0 0 No -24 0.86 Yes 43 78.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215664269 - NM_000465 BARD1 0 . . . 4.78 82.59 21 5.14 No 12 0.28 No 0 0 No -20 0.48 No 46 85.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33424993 - NM_002878 RAD51D 0 . . . 0.48 70.68 32 6.53 Yes 72 0.54 No 0 0 No -23 0.5 No 35 71.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7574666 - NM_000546 TP53 0 . . . 0.68 76.63 33 5.65 Yes 57 -3.83 No 0 0 No -32 0.56 No 50 39.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68683280 + NM_133509 RAD51B 0 . . . 1.39 62.84 34 5.74 Yes 76 0.5 No 0 0 No -26 0.67 Yes 48 63.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68315514 + NM_133509 RAD51B 0 . . . 1.34 71.69 19 5.66 Yes 58 1.03 Yes 0 0 No -18 0.84 Yes 49 65.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47643784 + NM_000251 MSH2 0 . . . 0.35 83.2 27 6.16 Yes 66 0.66 No 0 0 No -26 0.37 No 45 58.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131891899 + NM_005732 RAD50 0 . . . 6.2 81.21 13 5.1 No 34 0.67 No 0 0 No -52 0.8 Yes 42 93.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40996316 + NM_001164269 RAD51 0 . . . 7.12 86.56 26 5.29 No 20 -1.2 No 0 0 No -21 0.56 No 23 62.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59890701 - NM_032043 BRIP1 0 . . . 6.05 86.58 25 5.29 No 63 -3.85 No 0 0 No -22 0.67 Yes 48 65.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68843966 + NM_133509 RAD51B 0 . . . 3.89 78.35 23 5.74 Yes 59 -5.16 No 0 0 No -23 0.56 No 49 34.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21992232 - NM_000077 CDKN2A 0 . . . 1.56 70.31 32 7.91 Yes 49 0.71 No 0 0 No -31 0.83 Yes 36 64.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68507537 + NM_133509 RAD51B 0 . . . 5.86 80.76 12 4.52 No 33 0.29 No 0 0 No -37 0.21 No 41 29.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108148980 + NM_000051 ATM 0 . . . 2.12 65.46 28 5.2 No 44 1.3 Yes 0 0 No -20 0.37 No 43 93.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104175293 - NM_001100119 XRCC3 0 . . . 2.37 72.54 34 5.91 Yes 9 0.01 No 0 0 No -33 0.69 Yes 49 80.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68926119 + NM_133509 RAD51B 0 . . . 4.35 85.02 27 4.08 No 36 -1.17 No 0 0 No -26 0.58 No 50 88.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47786917 + NM_000251 MSH2 0 . . . 1.1 72.91 60 5.36 No 45 1.03 Yes 0 0 No -32 0.53 No 13 29.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68307613 + NM_133509 RAD51B 0 . . . 6.14 88.68 20 4.22 No 9 1.13 Yes 0 0 No -24 0.43 No 49 95.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59850711 - NM_032043 BRIP1 0 . . . 0.06 60.89 93 9.63 Yes 44 0.35 No 0 0 No -29 0.53 No 50 70.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68515655 + NM_133509 RAD51B 0 . . . 2.13 68.19 45 6.63 Yes 10 -2.09 No 0 0 No -44 0.56 No 48 76.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131927147 + NM_005732 RAD50 0 . . . 3.78 59.54 20 4.34 No 49 1.26 Yes 0 0 No -30 0.6 No 44 61.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32964480 + NM_000059 BRCA2 0 . . . 2.55 83.89 53 6.83 Yes 35 0.99 Yes 0 0 No -52 0.59 No 54 71.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108158986 + NM_000051 ATM 0 . . . 4.25 79.69 22 5 No 8 1.2 Yes 0 0 No -21 0.89 Yes 50 91.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108152491 + NM_000051 ATM 0 . . . 2.04 73.96 33 5.04 No 0 0.23 No 0 0 No -28 0.69 Yes 49 70.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68362141 + NM_133509 RAD51B 0 . . . 3.44 74.39 37 5.39 No 26 0.67 No 0 0 No -36 0.47 No 37 52.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89696242 + NM_000314 PTEN 0 . . . 4.55 74.86 13 4.8 No 0 1.04 Yes 0 0 No -23 0.52 No 47 80.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89625575 + NM_000314 PTEN 0 . . . 5.28 78.28 16 2.91 No 71 -6.34 No 0 0 No -27 0.81 Yes 50 51.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131921781 + NM_005732 RAD50 0 . . . 3.39 72.16 27 4.63 No 54 0.6 No 0 0 No -26 0.93 Yes 43 83.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68424204 + NM_133509 RAD51B 0 . . . 5.14 78.1 32 6.19 Yes 13 0.06 No 0 0 No -31 0.86 Yes 45 94.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105180570 + NM_021930 RINT1 0 . . . 4.4 87.07 14 8.22 Yes 44 0.84 Yes 0 0 No -27 0.51 No 11 63.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215590814 - NM_000465 BARD1 0 . . . 3.62 71.63 18 5.64 Yes 39 0.09 No 0 0 No -24 0.54 No 53 63.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68513726 + NM_133509 RAD51B 0 . . . 2.13 61.84 27 4.88 No 16 1.75 Yes 0 0 No -22 0.56 No 42 59.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68647416 + NM_133509 RAD51B 0 . . . 0.71 74.57 51 5.33 No 3 0.58 No 0 0 No -26 0.63 No 44 42.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105172799 + NM_021930 RINT1 0 . . . 7.89 82.4 29 5.56 Yes NA NA NA 0 0 No -32 0.64 No 51 66.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108116496 + NM_000051 ATM 0 . . . 2.92 82.06 19 4.58 No 3 1.14 Yes 0 0 No -35 0.64 No 49 38.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68896091 + NM_133509 RAD51B 0 . . . 3 0 24 5.48 No 73 -5.82 No 0 0 No -28 0.36 No 54 45.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68868306 + NM_004360 CDH1 0 . . . 9.5 94.63 18 4.9 No 30 0.85 Yes 0 0 No -17 0.45 No 45 69.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131919711 + NM_005732 RAD50 0 . . . 0.56 87.64 18 4.9 No 7 0.39 No 0 0 No -17 0.53 No 51 81.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104170318 - NM_001100119 XRCC3 0 . . . 5.99 70.79 25 4.77 No 67 0.16 No 0 0 No -24 0.69 Yes 42 65.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68959915 + NM_133509 RAD51B 0 . . . 2.51 68.68 24 8.11 Yes 61 1.14 Yes 0 0 No -23 0.89 Yes 29 87.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47774838 + NM_000251 MSH2 0 . . . 6.98 74.04 30 7.55 Yes 16 1.05 Yes 0 0 No -29 0.96 Yes 42 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48014179 + NM_000179 MSH6 0 . . . 0.33 0 37 6.5 Yes 57 0.6 No 0 0 No -36 0.45 No 53 36.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47756106 + NM_000251 MSH2 0 . . . 2.61 68.18 32 4.93 No 55 1.26 Yes 0 0 No -31 0.71 Yes 40 37.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68810595 + NM_004360 CDH1 0 . . . 7.75 87.58 21 4.1 No 9 0.07 No 0 0 No -20 0.41 No 46 71.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41221130 - NM_007294 BRCA1 0 . . . 2.68 72.4 19 4.83 No 68 -1.15 No 0 0 No -19 0.64 No 41 74.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68860137 + NM_004360 CDH1 0 . . . 2.43 72.1 22 6.21 Yes 17 -3.06 No 0 0 No -21 0.67 Yes 23 59.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37083713 + NM_000249 MLH1 0 . . . 2.33 70.68 27 4.53 No 43 1.07 Yes 0 0 No -20 0.65 No 26 81.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68866362 + NM_004360 CDH1 0 . . . 0.16 0 10 6.07 Yes 70 -3.1 No 0 0 No -28 0.32 No 51 43.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68625671 + NM_133509 RAD51B 0 . . . 3.97 79.67 14 3.87 No 20 0.99 Yes 0 0 No -34 0.53 No 38 86.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215645173 - NM_000465 BARD1 0 . . . 3.66 85.8 39 6.4 Yes -1 0.49 No 0 0 No -26 0.88 Yes 49 72.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108176093 + NM_000051 ATM 0 . . . 2.72 79.22 27 6.09 Yes 71 -2.98 No 0 0 No -26 0.86 Yes 49 35.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41216163 - NM_007294 BRCA1 0 . . . 1.49 0 19 4.55 No 10 0.54 No 0 0 No -27 0.51 No 47 64.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68983405 + NM_133509 RAD51B 0 . . . 2.98 70.12 29 5.47 No 20 0.78 Yes 0 0 No -29 0.5 No 31 61.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215663331 - NM_000465 BARD1 0 . . . 2.93 67.42 24 5.1 No 65 -4.71 No 0 0 No -23 0.79 Yes 49 78.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41203027 - NM_007294 BRCA1 0 . . . 5.76 79.13 29 4.86 No 57 -2.25 No 0 0 No -28 0.69 Yes 46 67.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59848831 - NM_032043 BRIP1 0 . . . 0.02 64.4 21 5.2 No -4 0.77 No 0 0 No -50 0.54 No 30 51.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68818686 + NM_004360 CDH1 0 . . . 2.33 75.21 32 5.5 No 3 0.83 Yes 0 0 No -24 0.81 Yes 33 49.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68624251 + NM_133509 RAD51B 0 . . . 6.35 91.35 29 5.38 No 76 -4.39 No 0 0 No -28 0.68 Yes 43 88.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68403182 + NM_133509 RAD51B 0 . . . 3.22 71.97 29 5.74 Yes 25 0.35 No 0 0 No -28 0.94 Yes 43 74.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56774962 + NM_058216 RAD51C 0 . . . 3.32 71.32 18 4.9 No 66 0.28 No 0 0 No -46 0.47 No 48 26.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75503313 - NM_001040108 MLH3 0 . . . 0.09 74.68 25 4.89 No 4 0.41 No 0 0 No -24 0.89 Yes 54 84.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215610054 - NM_000465 BARD1 0 . . . 5.89 75.56 19 5.31 No 9 0.91 Yes 0 0 No -34 0.4 No 41 79.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56784437 + NM_058216 RAD51C 0 . . . 4.27 72.29 37 5.66 Yes 61 0.7 No 0 0 No -21 0.31 No 44 69.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41242051 - NM_007294 BRCA1 0 . . . 6.64 72.25 19 4.78 No 67 1.08 Yes 0 0 No -23 0.39 No 24 61.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68476387 + NM_133509 RAD51B 0 . . . 0.32 73.37 54 7.23 Yes 73 1.37 Yes 0 0 No -22 0.39 No 38 74.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68800256 + NM_133509 RAD51B 0 . . . 0.05 0 26 5.39 No 28 -2.43 No 0 0 No -25 0.93 Yes 48 48.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190739447 + NM_000534 PMS1 0 . . . 1.77 70.9 21 7.15 Yes 20 0.6 No 0 0 No -20 0.82 Yes 38 90.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68665311 + NM_133509 RAD51B 0 . . . 7.36 69.48 35 6.11 Yes 21 0.91 Yes 0 0 No -24 0.52 No 37 69.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68401794 + NM_133509 RAD51B 0 . . . 0.51 0 15 5.38 No 13 0.8 Yes 0 0 No -20 0.36 No 45 91.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37084322 + NM_000249 MLH1 0 . . . 0.92 76.63 17 5.39 No 67 -4.96 No 0 0 No -16 0.58 No 48 78.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94218550 - NM_005591 MRE11 0 . . . 4.57 82.99 17 3.44 No 15 0.94 Yes 0 0 No -23 0.48 No 43 80.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41230654 - NM_007294 BRCA1 0 . . . 2.22 66.48 16 4.69 No 44 0.99 Yes 0 0 No -43 0.92 Yes 14 62.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89681454 + NM_000314 PTEN 0 . . . 1.07 84.58 35 6.53 Yes 42 0.25 No 0 0 No -30 0.78 Yes 39 91.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94183647 - NM_005591 MRE11 0 . . . 4.96 78.26 43 6.75 Yes 51 0.3 No 0 0 No -22 0.71 Yes 39 81.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215628686 - NM_000465 BARD1 0 . . . 2.48 75.34 15 5.46 No -3 0.4 No 0 0 No -28 0.41 No 46 77.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47683284 + NM_000251 MSH2 0 . . . 0.05 0 20 4.58 No 24 0.53 No 0 0 No -19 0.87 Yes 35 59.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68916717 + NM_133509 RAD51B 0 . . . 0.21 68.53 39 6.63 Yes 12 0.62 No 0 0 No -34 0.75 Yes 39 52.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68303417 + NM_133509 RAD51B 0 . . . 6.5 82.31 23 10.28 Yes 59 1.23 Yes 0 0 No -22 0.73 Yes 54 58.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47670265 + NM_000251 MSH2 0 . . . 1.93 0 17 5.37 No 31 2.17 Yes 0 0 No -51 0.34 No 42 67.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921418 + NM_133509 RAD51B 0 . . . 7.48 78.39 36 6.48 Yes 27 0.64 No 0 0 No -21 0.53 No 46 95.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47795795 + NM_000251 MSH2 0 . . . 5.79 79.12 34 6.11 Yes -1 -0.62 No 0 0 No -33 0.74 Yes 42 67.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68776780 + NM_004360 CDH1 0 . . . 1.57 56.56 19 6.06 Yes 68 -3.05 No 0 0 No -18 0.4 No 29 45.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108178007 + NM_000051 ATM 0 . . . 1.66 0 15 5.74 Yes 45 1.1 Yes 0 0 No -26 0.76 Yes 13 40.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94167225 - NM_005591 MRE11 0 . . . 2.74 75.24 28 5.21 No 59 0.75 No 0 0 No -27 0.48 No 45 35.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215604580 - NM_000465 BARD1 0 . . . 1.2 70.26 38 5.24 No 44 1.12 Yes 0 0 No -25 0.57 No 45 38.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68706684 + NM_133509 RAD51B 0 . . . 6.98 88.87 18 4.69 No 28 0.27 No 0 0 No -17 0.61 No 47 73.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190665077 + NM_000534 PMS1 0 . . . 3.72 69.4 31 6.45 Yes 76 0.39 No 0 0 No -30 0.86 Yes 41 69.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89661492 + NM_000314 PTEN 0 . . . 1.53 67.57 17 4.8 No 14 0.36 No 0 0 No -22 0.63 No 44 75.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108241609 + NM_000051 ATM 0 . . . 2.33 63.21 30 5.74 Yes 35 1.63 Yes 0 0 No -29 0.63 No 23 88.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108162798 + NM_000051 ATM 0 . . . 6.7 79.98 63 7.77 Yes 62 1.19 Yes 0 0 No -36 0.54 No 50 55.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89708780 + NM_000314 PTEN 0 . . . 2.51 66.28 14 6.4 Yes 74 -2.04 No 0 0 No -34 0.4 No 45 90.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68996008 + NM_133509 RAD51B 0 . . . 8.66 83.68 23 5.81 Yes 52 1.31 Yes 0 0 No -22 0.82 Yes 49 95.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108214033 + NM_000051 ATM 0 . . . 1.25 66.12 28 5.11 No 57 0.57 No 0 0 No -27 0.79 Yes 42 65.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68970727 + NM_133509 RAD51B 0 . . . 0.34 69.95 87 5.59 Yes 48 -4 No 0 0 No -35 0.74 Yes 40 87.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69036140 + NM_133509 RAD51B 0 . . . 6.49 87.44 23 6.97 Yes 23 0.36 No 0 0 No -22 0.57 No 46 80.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68758279 + NM_133509 RAD51B 0 . . . 2.15 66.47 25 3.7 No 75 -5.69 No 0 0 No -25 0.58 No 35 66.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59794228 - NM_032043 BRIP1 0 . . . 4.42 63.55 46 4.79 No 37 0.31 No 0 0 No -27 0.56 No 44 91.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190729135 + NM_000534 PMS1 0 . . . 0.32 74.68 25 5.43 No 45 0.62 No 0 0 No -24 0.9 Yes 54 75.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47750697 + NM_000251 MSH2 0 . . . 7.1 86.78 20 6.32 Yes 47 1.29 Yes 0 0 No -22 0.76 Yes 40 81.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89718842 + NM_000314 PTEN 0 . . . 2.52 81.28 26 5.1 No 67 -4.96 No 0 0 No -53 0.48 No 47 40.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69024813 + NM_133509 RAD51B 0 . . . 9.18 83.37 32 6.06 Yes 49 0.59 No 0 0 No -31 0.37 No 40 89.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68602404 + NM_133509 RAD51B 0 . . . 1.62 66.01 19 4.62 No 52 0.85 Yes 0 0 No -18 0.62 No 41 61.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56768309 + NM_058216 RAD51C 0 . . . 0.97 0 43 8.58 Yes 69 0.83 Yes 0 0 No -42 0.8 Yes 52 78.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89675147 + NM_000314 PTEN 0 . . . 4.73 73.88 23 4.32 No 17 1.72 Yes 0 0 No -22 0.78 Yes 41 89.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29115856 - NM_001005735 CHEK2 0 . . . 3.82 85.15 25 5.57 Yes 38 1.42 Yes 0 0 No -24 0.67 Yes 46 73.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68837509 + NM_004360 CDH1 0 . . . 1.28 77.24 17 4.72 No 31 0.99 Yes 0 0 No -20 0.46 No 43 59.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6028439 - NM_000535 PMS2 0 . . . 5.28 82.08 13 5.92 Yes 7 0.7 No 0 0 No -27 0.88 Yes 51 52.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56792026 + NM_058216 RAD51C 0 . . . 2.39 73.32 21 5.91 Yes 29 1.2 Yes 0 0 No -20 0.82 Yes 47 48.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68817761 + NM_004360 CDH1 0 . . . 3.6 85.02 18 6.94 Yes 4 1.2 Yes 0 0 No -24 0.7 Yes 54 65.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69064672 + NM_133509 RAD51B 0 . . . 1.46 66.62 40 8.3 Yes 50 -4.22 No 0 0 No -39 0.65 No 46 28.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47761402 + NM_000251 MSH2 0 . . . 3.88 72.56 17 4.8 No 31 1.55 Yes 0 0 No -24 0.64 No 32 71.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68988125 + NM_133509 RAD51B 0 . . . 5.01 74.87 11 4.12 No 70 -5.09 No 0 0 No -41 0.44 No 46 72.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131978987 + NM_005732 RAD50 0 . . . 9.8 89.92 16 5.2 No 60 0.71 No 0 0 No -20 0.46 No 47 50.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152368082 - NM_005431 XRCC2 0 . . . 5.92 82.31 26 5.38 No 58 0.72 No 0 0 No -25 0.71 Yes 55 45.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68786454 + NM_133509 RAD51B 0 . . . 0.39 0 15 3.57 No 7 0.68 No 0 0 No -59 0.59 No 51 49.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108135788 + NM_000051 ATM 0 . . . 0.26 71.45 29 5.22 No 18 -2.57 No 0 0 No -21 0.59 No 49 47.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29082440 - NM_001005735 CHEK2 0 . . . 3.69 77.09 26 5.21 No 67 -4.12 No 0 0 No -26 0.7 Yes 46 63.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68819139 + NM_004360 CDH1 0 . . . 3.75 84.95 21 5.98 Yes 42 0.12 No 0 0 No -28 0.54 No 16 44.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75480123 - NM_001040108 MLH3 0 . . . 2.79 72.33 33 6 Yes 26 2.28 Yes 0 0 No -29 0.56 No 32 59.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90951119 - NM_002485 NBN 0 . . . 6.73 92.59 18 4.51 No 27 0.76 No 0 0 No -55 0.43 No 45 88.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41239677 - NM_007294 BRCA1 0 . . . 2.38 83.13 26 6.27 Yes 23 1.08 Yes 0 0 No -25 0.83 Yes 35 68.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47733874 + NM_000251 MSH2 0 . . . 1.86 0 18 5.99 Yes 45 -0.03 No 0 0 No -17 0.6 No 38 76.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68967282 + NM_133509 RAD51B 0 . . . 0.89 0 20 4.58 No 35 0.68 No 0 0 No -19 0.94 Yes 51 88.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68346102 + NM_133509 RAD51B 0 . . . 3.04 76.46 28 5.83 Yes 44 0.31 No 0 0 No -27 0.81 Yes 43 38.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47657180 + NM_000251 MSH2 0 . . . 4.85 76.97 32 4.54 No 0 1.57 Yes 0 0 No -27 0.77 Yes 40 78.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59829176 - NM_032043 BRIP1 0 . . . 1.23 77.69 27 5.74 Yes 67 -4.96 No 0 0 No -26 0.69 Yes 43 45.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29086450 - NM_001005735 CHEK2 0 . . . 3.43 80.12 28 5.66 Yes 6 0.21 No 0 0 No -27 0.79 Yes 41 61.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1230267 + NM_000455 STK11 0 . . . 0.05 63.98 14 4.47 No 37 -4.12 No 0 0 No -31 0.41 No 44 23.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47763612 + NM_000251 MSH2 0 . . . 1.52 72.5 12 5.1 No 46 -3.45 No 0 0 No -22 0.46 No 44 64.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68939617 + NM_133509 RAD51B 0 . . . 1.19 75.74 56 7.79 Yes 17 1.3 Yes 0 0 No -27 0.65 No 41 93.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215606431 - NM_000465 BARD1 0 . . . 3.42 0 18 4.69 No 14 0.02 No 0 0 No -17 0.29 No 39 57.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47701276 + NM_000251 MSH2 0 . . . 6.23 75.09 9 4.8 No 67 0.92 Yes 0 0 No -19 0.72 Yes 45 79.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68754158 + NM_133509 RAD51B 0 . . . 11.04 83.95 27 5.74 Yes 67 0.49 No 0 0 No -26 0.91 Yes 42 34.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84390109 - NM_139076 FAM175A 0 . . . 1.23 64.13 20 3.26 No 43 0.82 Yes 0 0 No -23 0.65 No 30 83.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215666292 - NM_000465 BARD1 0 . . . 0.42 72.88 53 7.47 Yes -2 1.06 Yes 0 0 No -36 0.38 No 60 32.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59801501 - NM_032043 BRIP1 0 . . . 4.36 80.31 38 7.92 Yes 51 1.25 Yes 0 0 No -37 0.66 No 45 80.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59907073 - NM_032043 BRIP1 0 . . . 4.58 83.94 15 4.99 No 42 1.75 Yes 0 0 No -18 0.48 No 51 94.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89652851 + NM_000314 PTEN 0 . . . 2.24 65.81 28 5.29 No 18 1.13 Yes 0 0 No -27 0.87 Yes 33 76.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68748718 + NM_133509 RAD51B 0 . . . 5.12 84.41 17 4.58 No 35 0.86 Yes 0 0 No -43 0.32 No 40 66.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68307901 + NM_133509 RAD51B 0 . . . 5.25 73.72 18 4.08 No -4 0.64 No 0 0 No -19 0.58 No 35 97.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68415946 + NM_133509 RAD51B 0 . . . 1.42 68.12 16 4.69 No 39 1.38 Yes 0 0 No -33 0.68 Yes 48 64.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90950928 - NM_002485 NBN 0 . . . 3.98 0 18 4.82 No 55 0.49 No 0 0 No -17 0.42 No 55 54.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68870135 + NM_133509 RAD51B 0 . . . 3.96 78.2 12 4.24 No 51 1.43 Yes 0 0 No -34 0.88 Yes 20 48.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104179864 - NM_001100119 XRCC3 0 . . . 2.8 73.41 28 5.93 Yes 37 1.67 Yes 0 0 No -27 0.83 Yes 49 80.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68537681 + NM_133509 RAD51B 0 . . . 7.11 87.87 18 5.23 No 2 1.22 Yes 0 0 No -25 0.66 No 36 71.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41223880 - NM_007294 BRCA1 0 . . . 0.03 68.06 31 5.25 No 34 -0.68 No 0 0 No -27 0.51 No 48 73.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215646189 - NM_000465 BARD1 0 . . . 4.03 82.3 33 7.35 Yes 62 1.13 Yes 0 0 No -32 0.94 Yes 45 46.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23638425 - NM_024675 PALB2 0 . . . 0.8 61.7 23 5.2 No 19 0.13 No 0 0 No -22 0.7 Yes 43 66.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68535961 + NM_133509 RAD51B 0 . . . 3.13 76.73 15 5.39 No 70 -4.42 No 0 0 No -26 0.49 No 51 51.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21985526 - NM_000077 CDKN2A 0 . . . 0.15 72.12 19 6.62 Yes 24 0.65 No 0 0 No -26 0.35 No 34 65.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108102514 + NM_000051 ATM 0 . . . 2.31 0 12 5.39 No 51 -4.83 No 0 0 No -28 0.3 No 53 49.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105181861 + NM_021930 RINT1 0 . . . 2.02 80.49 31 5.1 No 37 1.57 Yes 0 0 No -24 0.57 No 26 70.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23629700 - NM_024675 PALB2 0 . . . 2.31 77.6 22 5.74 Yes 10 0.63 No 0 0 No -21 0.6 No 48 89.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47646322 + NM_000251 MSH2 0 . . . 1.08 84.22 29 3.95 No 33 1.45 Yes 0 0 No -25 0.6 No 25 44.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68856115 + NM_004360 CDH1 0 . . . 0.34 70.04 73 7.18 Yes 65 1.03 Yes 0 0 No -25 0.47 No 37 33.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131969197 + NM_005732 RAD50 0 . . . 7.03 82.51 15 4.58 No 59 1.32 Yes 0 0 No -42 0.38 No 41 92.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68307505 + NM_133509 RAD51B 0 . . . 8.31 83.03 31 5.43 No 44 1.05 Yes 0 0 No -25 0.56 No 40 65.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41018636 + NM_001164269 RAD51 0 . . . 3.43 80.61 31 5.64 Yes 9 1.05 Yes 0 0 No -30 0.74 Yes 49 65.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89625310 + NM_000314 PTEN 0 . . . 4.53 72.41 33 6.17 Yes 52 1.95 Yes 0 0 No -32 0.36 No 32 77.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68436226 + NM_133509 RAD51B 0 . . . 7.15 80.09 10 4.57 No 15 1.38 Yes 0 0 No -23 0.26 No 43 75.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37061954 + NM_000249 MLH1 0 . . . 3.07 86.69 20 4.46 No NA NA NA 0 0 No -22 0.74 Yes 52 32.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33446745 - NM_002878 RAD51D 0 . . . 0.14 0 17 5.28 No 47 1.33 Yes 27 0.38 Yes -21 0.81 Yes 35 65.75 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68795683 + NM_133509 RAD51B 0 . . . 7.08 75.01 25 5.78 Yes 1 0.9 Yes 0 0 No -24 0.67 Yes 44 79.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190677938 + NM_000534 PMS1 0 . . . 3.76 81.06 14 5 No 43 -2.24 No 0 0 No -27 0.67 Yes 45 47.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68967835 + NM_133509 RAD51B 0 . . . 3.66 0 26 6.63 Yes 41 -0.65 No 0 0 No -25 0.92 Yes 44 70.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47664236 + NM_000251 MSH2 0 . . . 2.29 70.37 16 4.69 No 24 0.81 Yes 0 0 No -44 0.37 No 20 44.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47671898 + NM_000251 MSH2 0 . . . 4.06 74.36 29 5.46 No 12 1.17 Yes 0 0 No -28 0.51 No 46 64.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131910625 + NM_005732 RAD50 0 . . . 3.72 78.68 19 4.9 No 71 0.79 Yes 0 0 No -52 0.58 No 38 81.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90944182 - NM_002485 NBN 0 . . . 2.76 72.86 15 4.54 No 47 1.23 Yes 0 0 No -34 0.53 No 38 69.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89725315 + NM_000314 PTEN 0 . . . 5.58 72.45 50 6.29 Yes 75 0.92 Yes 0 0 No -23 0.55 No 38 67.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68979090 + NM_133509 RAD51B 0 . . . 7.06 79.71 17 5.66 Yes 18 1.05 Yes 0 0 No -26 0.3 No 40 96.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68891979 + NM_133509 RAD51B 0 . . . 7.03 72.81 70 8.15 Yes 21 1.14 Yes 0 0 No -37 0.57 No 37 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68770507 + NM_133509 RAD51B 0 . . . 2.15 79.11 23 6 Yes 16 0.41 No 0 0 No -22 0.8 Yes 42 36.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94213440 - NM_005591 MRE11 0 . . . 8.35 74.66 38 7 Yes 32 -1.77 No 0 0 No -23 0.7 Yes 48 25.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215597435 - NM_000465 BARD1 0 . . . 3.46 83.35 30 5.57 Yes 45 0.73 No 0 0 No -29 0.85 Yes 13 63.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59866124 - NM_032043 BRIP1 0 . . . 2.18 74.46 22 4.8 No 34 0.53 No 0 0 No -20 0.75 Yes 23 80.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68791049 + NM_133509 RAD51B 0 . . . 3.54 75.71 20 5.1 No -3 0.25 No 0 0 No -27 0.58 No 50 51.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69047744 + NM_133509 RAD51B 0 . . . 1.85 79.28 15 4.37 No 69 0.75 No 0 0 No -44 0.4 No 41 80.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89642335 + NM_000314 PTEN 0 . . . 3.7 80.93 52 7.48 Yes 9 0.39 No 0 0 No -46 0.42 No 49 74.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68553914 + NM_133509 RAD51B 0 . . . 8.8 84.31 25 5.81 Yes 16 0.72 No 0 0 No -33 0.67 Yes 42 84.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1226592 + NM_000455 STK11 0 . . . 2.27 70.05 28 5.38 No 60 -2.78 No 0 0 No -27 0.5 No 41 15.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59777122 - NM_032043 BRIP1 0 . . . 5.65 77.09 18 5.66 Yes 9 0.61 No 0 0 No -17 0.49 No 42 80.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94198055 - NM_005591 MRE11 0 . . . 6.32 70.8 52 3.65 No 42 -4.94 No 0 0 No -26 0.68 Yes 53 73.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47727428 + NM_000251 MSH2 0 . . . 0.98 73.12 19 5 No 38 -2.21 No 0 0 No -18 0.62 No 45 66.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183905 - NM_005591 MRE11 0 . . . 4.35 74.54 29 5.83 Yes 10 1.17 Yes 0 0 No -28 0.54 No 48 73.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41254505 - NM_007294 BRCA1 0 . . . 0.84 74.68 22 7 Yes 53 0.59 No 0 0 No -47 0.36 No 52 61.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68549783 + NM_133509 RAD51B 0 . . . 5.26 76.64 25 4.24 No 2 0.21 No 0 0 No -24 0.46 No 48 86.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47795320 + NM_000251 MSH2 0 . . . 6.57 76.59 19 5.45 No 62 -5.39 No 0 0 No -26 0.84 Yes 47 62.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69010616 + NM_133509 RAD51B 0 . . . 4.6 87.38 24 6.85 Yes 21 1.32 Yes 0 0 No -24 0.65 No 44 93.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23629536 - NM_024675 PALB2 0 . . . 0.85 77.02 30 5.37 No 68 -4.58 No 0 0 No -18 0.47 No 42 88.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47677473 + NM_000251 MSH2 0 . . . 0.88 0 24 4.89 No 70 -4.08 No 0 0 No -20 0.36 No 50 64.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59919976 - NM_032043 BRIP1 0 . . . 3.99 75.16 16 6.02 Yes 8 0.36 No 0 0 No -27 0.44 No 50 59.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69053387 + NM_133509 RAD51B 0 . . . 3.31 80.02 51 6.86 Yes 8 0.36 No 0 0 No -20 0.45 No 50 94.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68803767 + NM_004360 CDH1 0 . . . 4.24 79.05 29 5.39 No 9 1.22 Yes 0 0 No -57 0.62 No 49 79.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108128300 + NM_000051 ATM 0 . . . 0.03 63.21 31 5.65 Yes 75 0.47 No 0 0 No -30 0.64 No 55 46.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68643838 + NM_133509 RAD51B 0 . . . 4.39 0 16 5.24 No 20 0.86 Yes 0 0 No -31 0.71 Yes 51 92.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48022649 + NM_000179 MSH6 0 . . . 2.79 78.18 33 6.16 Yes 18 -0.79 No 0 0 No -32 0.72 Yes 21 68.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68585056 + NM_133509 RAD51B 0 . . . 11.13 98.22 19 4.9 No 8 1.62 Yes 0 0 No -56 0.62 No 50 84.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215601413 - NM_000465 BARD1 0 . . . 1.2 69.74 42 6.63 Yes 75 0.86 Yes 0 0 No -24 0.46 No 38 81.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68852199 + NM_004360 CDH1 0 . . . 1.5 71.86 15 3.44 No 8 -2 No 0 0 No -21 0.54 No 50 18.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94162338 - NM_005591 MRE11 0 . . . 6.84 83.33 31 4.87 No -3 0.95 Yes 0 0 No -31 0.87 Yes 43 60.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68492648 + NM_133509 RAD51B 0 . . . 6.42 83.26 21 4.87 No 42 1.08 Yes 0 0 No -20 0.82 Yes 49 45.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215619543 - NM_000465 BARD1 0 . . . 8.45 80.27 46 7.13 Yes 7 0.94 Yes 0 0 No -55 0.64 No 47 40.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29095844 - NM_001005735 CHEK2 0 . . . 4.68 90.38 39 6.34 Yes 72 -4.74 No 0 0 No -38 0.46 No 52 57.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131979208 + NM_005732 RAD50 0 . . . 0.45 70.48 28 4.97 No 3 0.19 No 0 0 No -21 0.52 No 51 79.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68296365 + NM_133509 RAD51B 0 . . . 6.79 93.89 25 5.36 No 48 0.5 No 0 0 No -24 0.69 Yes 49 95.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68594550 + NM_133509 RAD51B 0 . . . 3.94 80.54 11 5 No 61 1.02 Yes 0 0 No -22 0.74 Yes 48 78.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190670119 + NM_000534 PMS1 0 . . . 4.39 75.14 20 5.55 No 56 0.2 No 0 0 No -28 0.66 No 38 44.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69006730 + NM_133509 RAD51B 0 . . . 2.05 77.4 25 5.39 No 20 0.05 No 0 0 No -28 0.56 No 50 52.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68867973 + NM_133509 RAD51B 0 . . . 3.43 84.35 41 5.39 No 9 0.62 No 0 0 No -27 0.81 Yes 49 81.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152348614 - NM_005431 XRCC2 0 . . . 3.95 81.57 16 4.69 No 71 0.08 No 0 0 No -41 0.41 No 52 61.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190662992 + NM_000534 PMS1 0 . . . 4.74 77.64 23 6.59 Yes 70 0.65 No 0 0 No -22 0.77 Yes 47 61.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190725772 + NM_000534 PMS1 0 . . . 2.21 65.24 44 6.75 Yes 16 0.79 Yes 0 0 No -26 0.92 Yes 42 65.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47662340 + NM_000251 MSH2 0 . . . 5.25 88.42 33 6 Yes 15 -0.13 No 0 0 No -32 0.82 Yes 43 29.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68789785 + NM_004360 CDH1 0 . . . 1.4 83.16 22 4.8 No 33 0.58 No 0 0 No -21 0.89 Yes 25 40.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59787117 - NM_032043 BRIP1 0 . . . 3.25 0 32 5.74 Yes 2 0.04 No 0 0 No -31 0.84 Yes 50 61.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108104454 + NM_000051 ATM 0 . . . 3.71 74.05 14 4.47 No 11 0.32 No 0 0 No -13 0.37 No 47 78.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68545282 + NM_133509 RAD51B 0 . . . 2.8 68.51 23 4.33 No 70 1.62 Yes 0 0 No -20 0.5 No 45 45.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68596183 + NM_133509 RAD51B 0 . . . 0.93 0 25 4.98 No 71 -6.16 No 0 0 No -24 0.42 No 42 40.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68544147 + NM_133509 RAD51B 0 . . . 1.54 85.12 20 7.14 Yes 18 0.48 No 0 0 No -31 0.61 No 32 31.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59937592 - NM_032043 BRIP1 0 . . . 4.26 77.39 24 5.56 Yes 11 0.86 Yes 0 0 No -23 0.59 No 47 66.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68349776 + NM_133509 RAD51B 0 . . . 0.93 0 49 6.84 Yes 74 1.56 Yes 0 0 No -30 0.48 No 52 46.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59777254 - NM_032043 BRIP1 0 . . . 5.4 79.85 20 4.85 No 23 -2.07 No 0 0 No -19 0.82 Yes 44 70.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108112724 + NM_000051 ATM 0 . . . 1.14 83.52 18 4.66 No 75 1.35 Yes 0 0 No -44 0.77 Yes 44 81.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152370187 - NM_005431 XRCC2 0 . . . 0.43 65.04 25 4.65 No 63 -4.4 No 0 0 No -24 0.9 Yes 46 55.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68535144 + NM_133509 RAD51B 0 . . . 7.78 71.63 28 5.38 No -3 1.37 Yes 0 0 No -27 0.82 Yes 27 50.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56793698 + NM_058216 RAD51C 0 . . . 3 78.61 16 5.38 No 7 0.58 No 0 0 No -22 0.9 Yes 51 47.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69045505 + NM_133509 RAD51B 0 . . . 3.66 66.92 9 3.87 No 30 0.39 No 0 0 No -30 0.44 No 47 62.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37074258 + NM_000249 MLH1 0 . . . 1.61 76.59 26 5.37 No 64 -5.31 No 0 0 No -25 0.44 No 41 55.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69135890 + NM_133509 RAD51B 0 . . . 0.68 66.94 33 6.71 Yes 75 -3.65 No 0 0 No -32 0.93 Yes 38 44.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7573803 - NM_000546 TP53 0 . . . 5.1 77.26 26 5.39 No 10 2.04 Yes 0 0 No -25 0.88 Yes 48 83.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68784838 + NM_133509 RAD51B 0 . . . 3.34 72.1 18 4.47 No 58 0.98 Yes 0 0 No -41 0.39 No 41 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68578646 + NM_133509 RAD51B 0 . . . 11.44 79.38 15 6.02 Yes 29 0.65 No 0 0 No -31 0.33 No 43 46.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59780116 - NM_032043 BRIP1 0 . . . 5.78 84.08 30 6.37 Yes 33 0.32 No 0 0 No -29 0.88 Yes 43 41.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89651958 + NM_000314 PTEN 0 . . . 2.54 71.43 18 4.47 No 65 0.91 Yes 0 0 No -17 0.66 Yes 50 79.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94223385 - NM_005591 MRE11 0 . . . 4.15 79.57 16 4.69 No -4 0.72 No 0 0 No -45 0.62 No 52 56.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152351758 - NM_005431 XRCC2 0 . . . 0.29 72.76 29 5.29 No 56 1.45 Yes 0 0 No -28 0.66 No 43 54.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59867854 - NM_032043 BRIP1 0 . . . 0.62 70.42 20 4.34 No 41 -0.38 No 0 0 No -27 0.65 No 49 48.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68636101 + NM_133509 RAD51B 0 . . . 4.98 78.79 30 5.64 Yes 9 1.15 Yes 0 0 No -29 0.48 No 49 62.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68414329 + NM_133509 RAD51B 0 . . . 3.53 73.87 23 4.83 No 22 0.39 No 0 0 No -22 0.78 Yes 48 66.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131917853 + NM_005732 RAD50 0 . . . 0.79 66.01 10 4 No 42 0.04 No 0 0 No -22 0.68 Yes 43 52.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69041172 + NM_133509 RAD51B 0 . . . 1.83 71.41 14 4.47 No 10 0.62 No 0 0 No -42 0.7 Yes 48 48.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215667079 - NM_000465 BARD1 0 . . . 2.49 71.07 14 5.59 Yes 73 -3.43 No 0 0 No -25 0.74 Yes 41 34.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68400306 + NM_133509 RAD51B 0 . . . 0.53 68.08 22 4.72 No 63 -0.95 No 0 0 No -21 0.7 Yes 48 32.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68477141 + NM_133509 RAD51B 0 . . . 3.39 81.07 34 5.74 Yes 75 -6.27 No 0 0 No -26 0.4 No 49 64.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68941742 + NM_133509 RAD51B 0 . . . 2.79 76.74 17 4.79 No 35 1.45 Yes 0 0 No -21 0.51 No 23 43.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68952175 + NM_133509 RAD51B 0 . . . 4.49 81.03 26 5.66 Yes 3 0.13 No 0 0 No -25 0.96 Yes 49 46.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108143620 + NM_000051 ATM 0 . . . 3.06 75.29 22 5.52 No 69 -5.24 No 0 0 No -21 0.54 No 47 97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68840786 + NM_133509 RAD51B 0 . . . 6.54 81.3 26 5.12 No 6 0.63 No 0 0 No -28 0.54 No 52 48.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68982765 + NM_133509 RAD51B 0 . . . 2.41 68.34 20 5.57 Yes 21 1.7 Yes 0 0 No -19 0.6 No 37 82.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68750814 + NM_133509 RAD51B 0 . . . 4.72 76.03 31 6.53 Yes 21 1.32 Yes 0 0 No -30 0.73 Yes 37 74.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215601920 - NM_000465 BARD1 0 . . . 3.64 81.01 32 5.74 Yes 31 1.06 Yes 0 0 No -28 0.37 No 50 60.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108160528 + NM_000051 ATM 0 . . . 3.17 71.14 29 6.37 Yes 16 -2.41 No 0 0 No -28 0.75 Yes 42 90.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68603002 + NM_133509 RAD51B 0 . . . 1.22 62.89 18 5.24 No 33 0.55 No 0 0 No -16 0.18 No 18 78.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68788973 + NM_133509 RAD51B 0 . . . 3.81 70.78 13 5.6 Yes -4 1.01 Yes 0 0 No -12 0.38 No 15 40.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68453171 + NM_133509 RAD51B 0 . . . 1.89 58.85 33 6.21 Yes 74 0.06 No 0 0 No -32 0.76 Yes 40 45.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68706522 + NM_133509 RAD51B 0 . . . 7.21 76.76 16 5.72 Yes 18 0.29 No 0 0 No -28 0.61 No 40 92.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108114562 + NM_000051 ATM 0 . . . 0.92 47.49 30 4.76 No 22 1.22 Yes 0 0 No -29 0.91 Yes 36 93.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47746684 + NM_000251 MSH2 0 . . . 3.27 76.05 13 6 Yes 55 -1.89 No 0 0 No -23 0.66 Yes 39 47.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59893701 - NM_032043 BRIP1 0 . . . 3.37 84.09 28 5.04 No 69 -5.2 No 0 0 No -27 0.62 No 50 86.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215620401 - NM_000465 BARD1 0 . . . 2.47 87.01 32 6.32 Yes 59 0.24 No 0 0 No -23 0.6 No 48 85.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47691534 + NM_000251 MSH2 0 . . . 1.74 74.55 29 5.35 No 36 -3.95 No 0 0 No -22 0.44 No 50 77.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68763072 + NM_133509 RAD51B 0 . . . 3.65 84.25 23 4.9 No 25 0.37 No 0 0 No -22 0.88 Yes 50 60.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69056996 + NM_133509 RAD51B 0 . . . 6.12 75.2 15 4.58 No 74 1.2 Yes 0 0 No -44 0.62 No 48 85.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108129968 + NM_000051 ATM 0 . . . 1.22 73.53 10 4 No 47 0.83 Yes 0 0 No -27 0.54 No 54 73.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68793353 + NM_004360 CDH1 0 . . . 6.62 70.06 27 6.71 Yes 21 0.72 No 0 0 No -24 0.66 No 30 81.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94183882 - NM_005591 MRE11 0 . . . 0.15 71.98 21 4.75 No 33 1.16 Yes 0 0 No -27 0.68 Yes 25 73.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68827327 + NM_133509 RAD51B 0 . . . 8.92 83.01 20 4.92 No 42 1.13 Yes 0 0 No -19 0.69 Yes 42 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104164984 - NM_001100119 XRCC3 0 . . . 6.72 77.74 51 7.53 Yes -4 0.28 No 0 0 No -25 0.68 Yes 45 45.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32917471 + NM_000059 BRCA2 0 . . . 0.35 64.28 34 7.64 Yes 61 0.39 No 0 0 No -33 0.57 No 47 67.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47713235 + NM_000251 MSH2 0 . . . 1.45 61.65 14 2.28 No 28 -3.53 No 0 0 No -32 0.69 Yes 42 30.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29102206 - NM_001005735 CHEK2 0 . . . 10.52 81.76 21 4.18 No 69 0.03 No 0 0 No -24 0.86 Yes 43 84.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32964999 + NM_000059 BRCA2 0 . . . 3.68 75.64 31 5.43 No 25 -2.13 No 0 0 No -27 0.5 No 50 27.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105185066 + NM_021930 RINT1 0 . . . 2.24 80.12 22 5.83 Yes 7 1.02 Yes 0 0 No -21 0.8 Yes 51 86.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59868295 - NM_032043 BRIP1 0 . . . 0.33 77.3 9 5.29 No 49 1.07 Yes 0 0 No -21 0.52 No 18 36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68815230 + NM_133509 RAD51B 0 . . . 2.13 62.08 40 7.43 Yes 66 0.58 No 0 0 No -39 0.88 Yes 47 30.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190683967 + NM_000534 PMS1 0 . . . 4.54 66.31 32 6.06 Yes 51 1.31 Yes 0 0 No -26 0.51 No 43 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32903816 + NM_000059 BRCA2 0 . . . 7.91 76.55 19 4.92 No 76 0.68 No 0 0 No -23 0.5 No 35 74.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68539288 + NM_133509 RAD51B 0 . . . 4.77 76.03 12 4.9 No 63 -3.07 No 0 0 No -22 0.59 No 35 55.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59796505 - NM_032043 BRIP1 0 . . . 2.89 81.37 23 6.1 Yes 73 0.68 No 0 0 No -22 0.58 No 49 61.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47804209 + NM_000251 MSH2 0 . . . 2.3 74.48 22 4.85 No 49 1.25 Yes 0 0 No -25 0.79 Yes 40 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41242719 - NM_007294 BRCA1 0 . . . 0.84 0 29 6.79 Yes 61 0.88 Yes 0 0 No -28 0.58 No 57 27.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59845165 - NM_032043 BRIP1 0 . . . 3.84 83.4 16 4.68 No 58 -3.45 No 0 0 No -20 0.8 Yes 45 54.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68585848 + NM_133509 RAD51B 0 . . . 8.93 87.82 15 4.77 No 15 1.57 Yes 0 0 No -22 0.77 Yes 43 81.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68325951 + NM_133509 RAD51B 0 . . . 0.99 67.39 17 4.8 No 52 0.87 Yes 0 0 No -28 0.66 No 52 52.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68544039 + NM_133509 RAD51B 0 . . . 1.36 70.86 26 5.66 Yes 34 -3.74 No 0 0 No -23 0.49 No 45 30.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59879075 - NM_032043 BRIP1 0 . . . 2.85 0 23 5.39 No 54 -3.53 No 0 0 No -30 0.68 Yes 42 83.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48032501 + NM_000179 MSH6 0 . . . 5.2 85.02 26 3.92 No 5 1.09 Yes 0 0 No -24 0.52 No 53 73.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68639844 + NM_133509 RAD51B 0 . . . 0.6 69.88 29 5.36 No 52 0.17 No 0 0 No -29 0.65 No 47 92.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1209239 + NM_000455 STK11 0 . . . 1.04 68.69 17 5.39 No 35 -3.05 No 0 0 No -28 0.73 Yes 45 28.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215617488 - NM_000465 BARD1 0 . . . 0.43 72.29 50 7.91 Yes 43 -5.1 No 0 0 No -24 0.92 Yes 46 47.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90978958 - NM_002485 NBN 0 . . . 3.26 75.25 18 4.44 No 37 0.19 No 0 0 No -26 0.66 No 43 74.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68801559 + NM_133509 RAD51B 0 . . . 4.4 80.17 26 4.14 No 53 0.12 No 0 0 No -25 0.77 Yes 44 53.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68874120 + NM_133509 RAD51B 0 . . . 6.66 82.93 38 6.48 Yes 14 0.35 No 0 0 No -35 0.71 Yes 44 70.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68500795 + NM_133509 RAD51B 0 . . . 4.95 82.27 15 4.94 No 3 1.55 Yes 0 0 No -21 0.47 No 48 76.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68617342 + NM_133509 RAD51B 0 . . . 2.79 72.75 22 5.29 No 34 0.82 Yes 0 0 No -21 0.38 No 42 82.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68592084 + NM_133509 RAD51B 0 . . . 3.1 71.13 17 3.81 No 69 0.98 Yes 0 0 No -24 0.37 No 51 65.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7587524 - NM_000546 TP53 0 . . . 1.77 81.83 36 5.32 No 34 1.59 Yes 0 0 No -26 0.78 Yes 24 78.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21970659 - NM_000077 CDKN2A 0 . . . 1.9 74.01 33 5.72 Yes 1 -1.5 No 0 0 No -32 0.88 Yes 45 66.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1218644 + NM_000455 STK11 0 . . . 2.38 69.68 20 5.1 No 36 -1.2 No 0 0 No -54 0.45 No 34 40.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41220104 - NM_007294 BRCA1 0 . . . 1.42 72.26 20 6.08 Yes 30 1.19 Yes 0 0 No -19 0.71 Yes 28 71.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41211397 - NM_007294 BRCA1 0 . . . 4.98 69.7 22 4.51 No 15 1.45 Yes 0 0 No -21 0.32 No 43 83.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152364179 - NM_005431 XRCC2 0 . . . 1.76 88.96 14 5.24 No 15 0.7 No 0 0 No -60 0.36 No 45 42.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94171000 - NM_005591 MRE11 0 . . . 7.69 79.94 17 5.73 Yes 58 0.77 No 0 0 No -16 0.75 Yes 44 71.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94187637 - NM_005591 MRE11 0 . . . 0.94 69.75 47 7.27 Yes 59 -5.85 No 0 0 No -21 0.4 No 43 49.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47746051 + NM_000251 MSH2 0 . . . 8.05 94.21 22 6.2 Yes 47 1.33 Yes 0 0 No -21 0.45 No 42 61.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68871156 + NM_133509 RAD51B 0 . . . 6.84 83.23 16 4.47 No 72 1.34 Yes 0 0 No -21 0.5 No 48 69.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68645797 + NM_133509 RAD51B 0 . . . 7.42 83.87 20 5.09 No 67 -1.83 No 0 0 No -19 0.67 Yes 49 62.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68507646 + NM_133509 RAD51B 0 . . . 7.7 81.34 32 5.73 Yes 20 0.51 No 0 0 No -31 0.52 No 43 67.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68783916 + NM_004360 CDH1 0 . . . 3.19 83.89 35 5.07 No 49 1.27 Yes 0 0 No -24 0.52 No 13 82.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47643083 + NM_000251 MSH2 0 . . . 3.01 67.4 21 6.08 Yes 44 0.24 No 0 0 No -20 0.85 Yes 52 56.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47790481 + NM_000251 MSH2 0 . . . 1.37 70.52 27 6.71 Yes 53 0.59 No 0 0 No -24 0.59 No 43 66.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68533734 + NM_133509 RAD51B 0 . . . 2.02 61.48 14 4.47 No 59 -4.04 No 0 0 No -19 0.58 No 47 56.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94197056 - NM_005591 MRE11 0 . . . 3.7 75.37 23 5 No 74 0.88 Yes 0 0 No -27 0.5 No 13 65.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84395121 - NM_139076 FAM175A 0 . . . 4.19 73.56 17 4.58 No 14 1.22 Yes 0 0 No -21 0.35 No 44 94.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41278491 - NM_007294 BRCA1 0 . . . 5.16 64.85 32 5.58 Yes 1 1.31 Yes 0 0 No -29 0.79 Yes 46 67.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47747808 + NM_000251 MSH2 0 . . . 8.5 84.37 20 5.1 No 67 -1.63 No 0 0 No -56 0.94 Yes 51 49.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190729730 + NM_000534 PMS1 0 . . . 7.29 85.61 16 4.23 No 2 0.24 No 0 0 No -25 0.39 No 47 78.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41017216 + NM_001164269 RAD51 0 . . . 4.42 84.22 28 6.16 Yes 33 1.05 Yes 0 0 No -22 0.45 No 25 39.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68490531 + NM_133509 RAD51B 0 . . . 6.16 73.6 36 6.77 Yes 34 0.32 No 0 0 No -31 0.46 No 37 76.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68415227 + NM_133509 RAD51B 0 . . . 4.16 74.44 17 3.81 No 33 -2.22 No 0 0 No -21 0.59 No 49 44.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56810161 + NM_058216 RAD51C 0 . . . 2.98 75.91 43 5.37 No 58 0.8 Yes 0 0 No -51 0.31 No 31 48.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47754332 + NM_000251 MSH2 0 . . . 1.51 0 19 4.61 No 73 0.69 No 0 0 No -24 0.91 Yes 45 42.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48011505 + NM_000179 MSH6 0 . . . 1.73 70.49 26 5 No 17 0.58 No 0 0 No -28 0.27 No 41 61.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68451140 + NM_133509 RAD51B 0 . . . 6.55 72.94 28 5.39 No 8 1.47 Yes 0 0 No -27 0.92 Yes 44 91.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89719606 + NM_000314 PTEN 0 . . . 4.34 70.54 22 5.71 Yes 62 0.71 No 0 0 No -21 0.86 Yes 48 55.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105205484 + NM_021930 RINT1 0 . . . 3.38 79.64 21 4.36 No 3 0.82 Yes 0 0 No -18 0.62 No 40 71.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68694435 + NM_133509 RAD51B 0 . . . 0.33 0 16 6.34 Yes 27 -1.39 No 0 0 No -28 0.85 Yes 41 81.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68706359 + NM_133509 RAD51B 0 . . . 5.17 78.28 23 4.95 No 70 2.26 Yes 0 0 No -22 0.81 Yes 32 87.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68622444 + NM_133509 RAD51B 0 . . . 5.51 74.19 17 4.8 No 18 0.53 No 0 0 No -22 0.52 No 40 78.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68539830 + NM_133509 RAD51B 0 . . . 1.27 73.31 28 6.22 Yes 70 -4.1 No 0 0 No -27 0.78 Yes 27 55.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1215995 + NM_000455 STK11 0 . . . 5.69 71.57 22 5.1 No 19 1.53 Yes 0 0 No -21 0.91 Yes 44 70.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94220391 - NM_005591 MRE11 0 . . . 5.06 68.97 22 5.83 Yes 0 1.54 Yes 0 0 No -21 0.74 Yes 38 66.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68439468 + NM_133509 RAD51B 0 . . . 2.98 76.28 35 5.18 No 42 -1.93 No 0 0 No -27 0.88 Yes 45 48.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94186760 - NM_005591 MRE11 0 . . . 0.26 71.68 18 4.47 No 63 0.47 No 0 0 No -17 0.94 Yes 48 75.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104166344 - NM_001100119 XRCC3 0 . . . 3.35 70.47 15 5.92 Yes 76 0.54 No 0 0 No -23 0.56 No 40 57.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41223998 - NM_007294 BRCA1 0 . . . 3.46 84.95 34 7.28 Yes 56 0.73 No 0 0 No -33 0.54 No 13 58.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105198468 + NM_021930 RINT1 0 . . . 0.68 76.07 19 5.65 Yes 75 0.65 No 0 0 No -18 0.37 No 49 70.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105178931 + NM_021930 RINT1 0 . . . 11.53 93.67 18 5.5 No 21 -0.76 No 0 0 No -28 0.5 No 37 82.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68628933 + NM_133509 RAD51B 0 . . . 1.15 67.3 18 4.67 No 33 0.16 No 0 0 No -21 0.46 No 41 75.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68748935 + NM_133509 RAD51B 0 . . . 5.74 83.46 20 4.61 No 63 1.6 Yes 0 0 No -19 0.53 No 55 58.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68302471 + NM_133509 RAD51B 0 . . . 2.83 70.44 16 4.39 No 58 -4.68 No 0 0 No -25 0.63 No 42 62.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89621491 + NM_000314 PTEN 0 . . . 0.66 67.36 17 5.44 No 52 -3.08 No 0 0 No -28 0.54 No 47 30.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131959368 + NM_005732 RAD50 0 . . . 6.19 88.96 34 5.56 Yes 33 0.03 No 0 0 No -38 0.72 Yes 46 73.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108211264 + NM_000051 ATM 0 . . . 6.05 84.63 30 6.99 Yes 54 0.67 No 0 0 No -32 0.43 No 44 60.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190662761 + NM_000534 PMS1 0 . . . 2.85 71.07 28 5.39 No 9 0.55 No 0 0 No -27 0.92 Yes 49 67.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68990443 + NM_133509 RAD51B 0 . . . 2.17 64.29 15 5.02 No 61 0.93 Yes 0 0 No -20 0.72 Yes 31 61.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69083203 + NM_133509 RAD51B 0 . . . 1.67 67.6 24 7.3 Yes 36 -1.22 No 0 0 No -23 0.49 No 32 75.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68358980 + NM_133509 RAD51B 0 . . . 0.49 73.57 16 5.04 No 76 1.41 Yes 0 0 No -45 0.79 Yes 45 95.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68794476 + NM_133509 RAD51B 0 . . . 1.26 67.32 28 4.88 No 76 0.51 No 0 0 No -25 0.65 No 39 56.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69103898 + NM_133509 RAD51B 0 . . . 0.75 69.93 28 5.38 No 5 0.68 No 0 0 No -25 0.57 No 42 86.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33438152 - NM_002878 RAD51D 0 . . . 1.54 65.05 9 3.87 No 23 1.47 Yes 0 0 No -32 0.6 No 40 62.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68865404 + NM_133509 RAD51B 0 . . . 1.27 72.66 23 5.38 No 28 1.03 Yes 0 0 No -22 0.92 Yes 40 96.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59915164 - NM_032043 BRIP1 0 . . . 9.27 87.29 25 3.76 No 4 0.9 Yes 0 0 No -25 0.81 Yes 32 72.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59788368 - NM_032043 BRIP1 0 . . . 3.61 77.4 18 4.9 No 75 0.48 No 0 0 No -29 0.59 No 44 33.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7592376 - NM_000546 TP53 0 . . . 10.33 84.66 13 3.98 No 12 1.25 Yes 0 0 No -25 0.54 No 46 95.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69108054 + NM_133509 RAD51B 0 . . . 0.62 66.21 30 5.66 Yes 25 1.75 Yes 0 0 No -25 0.56 No 19 67.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32920824 + NM_000059 BRCA2 0 . . . 4.12 81.82 13 5.64 Yes 65 1.23 Yes 0 0 No -27 0.63 No 43 51.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56782090 + NM_058216 RAD51C 0 . . . 0.28 66.33 26 5.66 Yes 2 0.87 Yes 0 0 No -25 0.66 No 42 49.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41219101 - NM_007294 BRCA1 0 . . . 0.13 74.23 19 5 No 57 1.25 Yes 0 0 No -21 0.52 No 54 90.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94193351 - NM_005591 MRE11 0 . . . 1.68 84.33 54 6.9 Yes 66 -3.88 No 0 0 No -33 0.44 No 48 78.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29136203 - NM_001005735 CHEK2 0 . . . 5.82 74.3 14 4.47 No 56 0.58 No 0 0 No -53 0.51 No 45 55.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104178020 - NM_001100119 XRCC3 0 . . . 1.39 66.96 33 6.99 Yes 70 1.02 Yes 25 0.85 Yes -32 0.95 Yes 33 55.65 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 47761338 + NM_000251 MSH2 0 . . . 4.3 71.91 23 5.27 No 21 0.99 Yes 0 0 No -26 0.56 No 37 67.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75484531 - NM_001040108 MLH3 0 . . . 5.69 80.07 10 4.4 No 4 2.34 Yes 0 0 No -27 0.87 Yes 35 56.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94193225 - NM_005591 MRE11 0 . . . 7.71 78.06 26 5.21 No 1 2.09 Yes 0 0 No -25 0.6 No 40 78.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59883183 - NM_032043 BRIP1 0 . . . 3.99 81.2 14 4.8 No 4 0.63 No 0 0 No -17 0.45 No 50 56.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75490112 - NM_001040108 MLH3 0 . . . 7.66 84.28 14 4 No 72 1.25 Yes 0 0 No -29 0.8 Yes 45 82.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69079803 + NM_133509 RAD51B 0 . . . 2.55 64.04 16 5.47 No -4 0.22 No 0 0 No -49 0.47 No 42 64.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68556588 + NM_133509 RAD51B 0 . . . 5.7 74.6 25 5.05 No 4 0.89 Yes 0 0 No -24 0.6 No 46 63.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68632914 + NM_133509 RAD51B 0 . . . 3.12 0 40 6.09 Yes 66 0.26 No 0 0 No -26 0.69 Yes 28 89.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89710856 + NM_000314 PTEN 0 . . . 3.82 71.26 26 5.48 No 48 0.16 No 0 0 No -25 0.88 Yes 10 71.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68589798 + NM_133509 RAD51B 0 . . . 3.21 87.97 20 5.1 No 62 0.11 No 0 0 No -19 0.53 No 49 48.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68953438 + NM_133509 RAD51B 0 . . . 0.84 55.27 18 4.8 No 55 2.17 Yes 0 0 No -21 0.52 No 43 22.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69127693 + NM_133509 RAD51B 0 . . . 3.22 61.68 46 6.17 Yes 42 0.08 No 0 0 No -35 0.63 No 43 36.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68401628 + NM_133509 RAD51B 0 . . . 9.06 79.86 21 3.97 No 37 0.2 No 0 0 No -20 0.47 No 49 83.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69008420 + NM_133509 RAD51B 0 . . . 1.49 81.66 49 7.64 Yes 11 0.42 No 0 0 No -26 0.54 No 47 73.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41006012 + NM_001164269 RAD51 0 . . . 1.41 72.26 25 5.1 No 30 1.2 Yes 0 0 No -24 0.9 Yes 28 73.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68471617 + NM_133509 RAD51B 0 . . . 7.3 82.19 33 4.27 No 76 -2.06 No 0 0 No -28 0.63 No 26 53.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68744550 + NM_133509 RAD51B 0 . . . 7.17 87.26 37 6.88 Yes 9 1.13 Yes 0 0 No -36 0.8 Yes 49 93.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89693315 + NM_000314 PTEN 0 . . . 2.84 72.56 21 4.23 No 76 0.72 No 0 0 No -21 0.47 No 42 42.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94188207 - NM_005591 MRE11 0 . . . 0.34 57.18 32 5.69 Yes 44 -3.88 No 0 0 No -27 0.65 No 51 46.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29124430 - NM_001005735 CHEK2 0 . . . 5.59 70.16 21 5.04 No 29 0.39 No 0 0 No -45 0.43 No 38 57.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68534529 + NM_133509 RAD51B 0 . . . 4.17 77.17 12 3.62 No 36 -3.8 No 0 0 No -53 0.55 No 43 63.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152370026 - NM_005431 XRCC2 0 . . . 2.01 79.11 21 7.08 Yes 39 0.02 No 0 0 No -20 0.52 No 41 76.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41195071 - NM_007294 BRCA1 0 . . . 4.75 68.37 29 5.31 No 2 1.02 Yes 0 0 No -28 0.68 Yes 53 83.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29082713 - NM_001005735 CHEK2 0 . . . 5 86.08 34 6.99 Yes 14 0.81 Yes 0 0 No -26 0.55 No 44 96.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68955690 + NM_133509 RAD51B 0 . . . 2.37 83.04 20 4.7 No 20 0.81 Yes 0 0 No -19 0.61 No 38 82.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108137409 + NM_000051 ATM 0 . . . 5.16 81.84 11 4.9 No 22 0.48 No 0 0 No -17 0.48 No 43 50.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32902399 + NM_000059 BRCA2 0 . . . 4.36 88.76 23 5.01 No 35 1.64 Yes 0 0 No -31 0.6 No 23 86.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94170046 - NM_005591 MRE11 0 . . . 0.72 73.91 18 3.98 No 50 1.23 Yes 0 0 No -20 0.66 Yes 46 85.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68709963 + NM_133509 RAD51B 0 . . . 5.2 0 9 3.87 No 42 1.05 Yes 0 0 No -28 0.47 No 43 65.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69128300 + NM_133509 RAD51B 0 . . . 0.61 64.32 15 5.74 Yes 58 0.5 No 0 0 No -46 0.27 No 44 70.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68644184 + NM_133509 RAD51B 0 . . . 3.08 72.92 22 4.8 No 18 1.13 Yes 0 0 No -21 0.88 Yes 40 75.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68621182 + NM_133509 RAD51B 0 . . . 3.63 81.65 26 7.53 Yes 6 0.63 No 0 0 No -25 0.91 Yes 52 75.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105207422 + NM_021930 RINT1 0 . . . 0.28 65.66 19 5.44 No 44 -1.56 No 0 0 No -24 0.45 No 35 64.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40988651 + NM_001164269 RAD51 0 . . . 5.44 74.06 21 4.95 No 46 0.2 No 0 0 No -20 0.73 Yes 46 54.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59821485 - NM_032043 BRIP1 0 . . . 3.32 75.21 37 6.29 Yes 69 -4.11 No 0 0 No -21 0.69 Yes 48 64.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23629519 - NM_024675 PALB2 0 . . . 0.11 80.65 37 6.4 Yes 8 0.31 No 0 0 No -34 0.57 No 50 83.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56799700 + NM_058216 RAD51C 0 . . . 1.5 73.63 32 5.24 No 54 1.83 Yes 0 0 No -31 0.57 No 53 59.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68974882 + NM_133509 RAD51B 0 . . . 5.24 0 19 6.07 Yes 27 1.39 Yes 0 0 No -23 0.38 No 39 47.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59834992 - NM_032043 BRIP1 0 . . . 4.39 77.66 18 4.55 No 48 -1.36 No 0 0 No -28 0.55 No 50 44.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23637590 - NM_024675 PALB2 0 . . . 1.26 72.44 29 5.89 Yes 39 0 No 0 0 No -28 0.7 Yes 29 32.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90964698 - NM_002485 NBN 0 . . . 1.55 69.37 29 8.12 Yes 60 -4.54 No 0 0 No -28 0.91 Yes 40 63.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079503 + NM_000249 MLH1 0 . . . 2.57 67.64 35 7.08 Yes 42 -4.69 No 0 0 No -34 0.92 Yes 41 51.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41272980 - NM_007294 BRCA1 0 . . . 2.33 84.22 15 5.74 Yes 39 1.07 Yes 0 0 No -26 0.39 No 50 40.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6013887 - NM_000535 PMS2 0 . . . 1.53 79.38 15 4.34 No 69 0.94 Yes 0 0 No -28 0.63 No 56 40.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59820339 - NM_032043 BRIP1 0 . . . 4.45 99.09 29 5.29 No 4 0.25 No 0 0 No -28 0.73 Yes 53 57.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108142694 + NM_000051 ATM 0 . . . 2.88 78.03 22 5.2 No 59 1.45 Yes 0 0 No -54 0.64 No 49 65.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1224248 + NM_000455 STK11 0 . . . 2.44 75.14 14 3.99 No NA NA NA 0 0 No -34 0.68 Yes 53 69.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68539914 + NM_133509 RAD51B 0 . . . 6.22 75.91 61 7.13 Yes 18 -1.55 No 0 0 No -22 0.66 No 15 34.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071888 + NM_133509 RAD51B 0 . . . 1.15 72.76 30 5.92 Yes 48 1.02 Yes 0 0 No -23 0.5 No 35 84.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68573146 + NM_133509 RAD51B 0 . . . 5.62 93.23 31 6 Yes 42 -2.88 No 0 0 No -24 0.57 No 45 59.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69054381 + NM_133509 RAD51B 0 . . . 2.39 0 11 4.8 No 10 -0.63 No 0 0 No -25 0.31 No 60 48.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68823201 + NM_133509 RAD51B 0 . . . 3.61 70.06 21 3.54 No 8 0.3 No 0 0 No -20 0.92 Yes 44 57.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89712818 + NM_000314 PTEN 0 . . . 4.61 79.96 23 5.29 No 43 1.59 Yes 0 0 No -21 0.47 No 15 69.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68761271 + NM_133509 RAD51B 0 . . . 1.62 66.29 41 5.93 Yes 1 0.29 No 0 0 No -21 0.27 No 45 72.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59762722 - NM_032043 BRIP1 0 . . . 7.38 76.97 18 5.92 Yes 57 1.09 Yes 0 0 No -17 0.25 No 54 63.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152375124 - NM_005431 XRCC2 0 . . . 8.45 84.55 31 5.48 No 6 1.44 Yes 0 0 No -30 0.47 No 47 69.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69095985 + NM_133509 RAD51B 0 . . . 2.72 74.8 11 4.8 No 50 1.36 Yes 0 0 No -42 0.76 Yes 56 24.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32928044 + NM_000059 BRCA2 0 . . . 3.58 65.6 27 4.18 No 1 0.66 No 0 0 No -26 0.73 Yes 48 50.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108146585 + NM_000051 ATM 0 . . . 6.8 78.7 15 5.47 No 54 1.33 Yes 0 0 No -25 0.29 No 39 72.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152352929 - NM_005431 XRCC2 0 . . . 3.25 80.12 28 5.6 Yes 68 1.03 Yes 0 0 No -31 0.8 Yes 45 73.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29129994 - NM_001005735 CHEK2 0 . . . 1.17 69.61 22 4.04 No 7 0.16 No 0 0 No -21 0.86 Yes 51 39.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108206080 + NM_000051 ATM 0 . . . 1.38 74.65 13 2.89 No 46 0.49 No 0 0 No -16 0.64 No 41 41.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41204005 - NM_007294 BRCA1 0 . . . 2.36 75.45 23 5.16 No 31 -4 No 0 0 No -22 0.53 No 48 55.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69017470 + NM_133509 RAD51B 0 . . . 1.9 78.85 25 4.08 No 74 1.07 Yes 0 0 No -24 0.67 Yes 52 43.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69107123 + NM_133509 RAD51B 0 . . . 5.2 74.41 17 4.36 No 60 0.38 No 0 0 No -16 0.49 No 45 89.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41012320 + NM_001164269 RAD51 0 . . . 5.14 72.88 23 6.71 Yes 54 -3.89 No 0 0 No -28 0.42 No 45 72.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59933753 - NM_032043 BRIP1 0 . . . 6.54 82.73 39 6.71 Yes 46 0.33 No 0 0 No -30 0.54 No 42 48.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68382618 + NM_133509 RAD51B 0 . . . 1.68 0 20 7.07 Yes 48 1.26 Yes 0 0 No -19 0.73 Yes 52 53.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68734614 + NM_133509 RAD51B 0 . . . 2.35 71.91 24 5.28 No 20 1.26 Yes 0 0 No -31 0.37 No 38 64.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59916255 - NM_032043 BRIP1 0 . . . 5.44 86.88 16 5.04 No 3 0.39 No 0 0 No -20 0.48 No 40 82.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29110997 - NM_001005735 CHEK2 0 . . . 4.92 78.41 22 5.29 No 51 0.66 No 0 0 No -21 0.91 Yes 47 78.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68445931 + NM_133509 RAD51B 0 . . . 0.58 64.75 17 4.79 No 35 1.06 Yes 0 0 No -56 0.81 Yes 46 60.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56802555 + NM_058216 RAD51C 0 . . . 4.53 74.02 34 7.32 Yes 31 1.48 Yes 0 0 No -33 0.74 Yes 41 85.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69084394 + NM_133509 RAD51B 0 . . . 0.96 0 11 4.9 No 66 1.75 Yes 0 0 No -26 0.52 No 28 55.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68625595 + NM_133509 RAD51B 0 . . . 0.62 69.09 14 4.47 No 45 0.82 Yes 0 0 No -54 0.53 No 50 38.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59769693 - NM_032043 BRIP1 0 . . . 5.42 82.97 27 5.48 No 9 1.17 Yes 0 0 No -26 0.78 Yes 40 85.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48020717 + NM_000179 MSH6 0 . . . 0.94 76.63 47 7.16 Yes 63 -4.56 No 0 0 No -32 0.85 Yes 43 39.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190690559 + NM_000534 PMS1 0 . . . 4.14 81.4 27 5.42 No 61 0.06 No 0 0 No -26 0.69 Yes 50 96.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68316761 + NM_133509 RAD51B 0 . . . 6.49 90.21 45 7.7 Yes 2 1.53 Yes 0 0 No -29 0.72 Yes 44 67.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105183655 + NM_021930 RINT1 0 . . . 0.61 0 16 5.06 No 76 1.37 Yes 0 0 No -21 0.38 No 48 34.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37077936 + NM_000249 MLH1 0 . . . 2.65 74.45 34 5.56 Yes 66 -4.64 No 0 0 No -26 0.54 No 43 78.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131975857 + NM_005732 RAD50 0 . . . 6.65 73.82 23 5.16 No 24 0.74 No 0 0 No -25 0.77 Yes 29 50.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89707533 + NM_000314 PTEN 0 . . . 0.84 74.68 25 5.27 No 61 1.23 Yes 0 0 No -24 0.89 Yes 52 54.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32930746 + NM_000059 BRCA2 0 . . . 10.15 82.26 30 4.7 No 36 -0.32 No 0 0 No -29 0.67 Yes 41 47.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89629548 + NM_000314 PTEN 0 . . . 6.32 83.92 15 3.81 No 24 0.41 No 0 0 No -15 0.27 No 40 82.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108124737 + NM_000051 ATM 0 . . . 5.17 74.32 48 7.94 Yes 17 0.29 No 0 0 No -47 0.92 Yes 41 77.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6021359 - NM_000535 PMS2 0 . . . 0.76 0 29 7.11 Yes 8 0.88 Yes 0 0 No -28 0.87 Yes 41 81.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90949436 - NM_002485 NBN 0 . . . 0.65 63.13 25 5.48 No 34 -3.26 No 0 0 No -24 0.78 Yes 50 61.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68854973 + NM_133509 RAD51B 0 . . . 1.22 73.39 26 5.2 No 52 0.02 No 0 0 No -25 0.61 No 48 69.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108105102 + NM_000051 ATM 0 . . . 5.92 76.24 22 5.2 No 62 1.07 Yes 0 0 No -21 0.79 Yes 43 71.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40986152 + NM_001164269 RAD51 0 . . . 9.49 83.89 65 8.24 Yes 35 1.54 Yes 0 0 No -22 0.75 Yes 39 55.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41256522 - NM_007294 BRCA1 0 . . . 0.55 61.38 9 5.74 Yes 5 0.2 No 0 0 No -28 0.25 No 53 81.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45796644 - NM_001048171 MUTYH 0 . . . 0.43 0 16 4.68 No 45 1.01 Yes 0 0 No -19 0.52 No 35 46.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68320679 + NM_133509 RAD51B 0 . . . 1.4 68.39 25 5.55 No 44 -3.85 No 0 0 No -21 0.65 No 35 45.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68978355 + NM_133509 RAD51B 0 . . . 3.97 90.29 35 3.75 No 39 1.37 Yes 0 0 No -28 0.72 Yes 52 27.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105195700 + NM_021930 RINT1 0 . . . 2.15 74.48 15 4.47 No 6 0.31 No 0 0 No -23 0.36 No 47 68.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47670285 + NM_000251 MSH2 0 . . . 3.84 80.7 24 5 No 51 2.17 Yes 0 0 No -39 0.45 No 44 64.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47668684 + NM_000251 MSH2 0 . . . 0.97 75.18 36 6.06 Yes 33 1.15 Yes 0 0 No -35 0.64 No 25 44.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89621367 + NM_000314 PTEN 0 . . . 5.5 79.63 29 5.28 No -2 0.67 No 0 0 No -28 0.88 Yes 51 42.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68717331 + NM_133509 RAD51B 0 . . . 0.68 67.54 14 4.37 No 17 -3.24 No 0 0 No -48 0.37 No 14 26.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68439093 + NM_133509 RAD51B 0 . . . 3.96 0 19 5 No 57 -1.74 No 0 0 No -23 0.55 No 47 51.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108167448 + NM_000051 ATM 0 . . . 1.02 69.69 22 6.45 Yes 62 -1.84 No 0 0 No -30 0.52 No 28 49.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45794816 - NM_001048171 MUTYH 0 . . . 2.65 85.83 43 6.71 Yes 3 0.7 No 0 0 No -42 0.9 Yes 50 77.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59811237 - NM_032043 BRIP1 0 . . . 4.11 90.03 17 3.57 No 8 0.47 No 0 0 No -22 0.68 Yes 40 55.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23632524 - NM_024675 PALB2 0 . . . 1.93 0 13 4.98 No 45 0.26 No 0 0 No -22 0.53 No 38 63.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47662319 + NM_000251 MSH2 0 . . . 2.49 0 15 3.8 No 62 1.16 Yes 0 0 No -27 0.94 Yes 41 11.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131916097 + NM_005732 RAD50 0 . . . 0.12 0 18 5.54 No 8 1.42 Yes 0 0 No -26 0.62 No 50 86.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69098421 + NM_133509 RAD51B 0 . . . 4.54 75.66 30 5.57 Yes 32 0.36 No 0 0 No -29 0.7 Yes 37 76.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68782357 + NM_133509 RAD51B 0 . . . 5.21 84.22 20 3.92 No 76 1.48 Yes 0 0 No -23 0.83 Yes 50 88.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32956297 + NM_000059 BRCA2 0 . . . 2.2 72.26 15 5.19 No -2 0.17 No 0 0 No -25 0.52 No 23 75.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68979141 + NM_133509 RAD51B 0 . . . 1.71 68.57 18 4.69 No 69 1.01 Yes 0 0 No -23 0.66 No 35 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68550006 + NM_133509 RAD51B 0 . . . 3.65 76.7 42 9 Yes -1 0.27 No 0 0 No -41 0.63 No 51 44.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59868162 - NM_032043 BRIP1 0 . . . 0.11 49.83 12 4.67 No 73 -2.9 No 0 0 No -20 0.56 No 39 46.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131945985 + NM_005732 RAD50 0 . . . 5.69 76.67 19 5 No 4 1.53 Yes 0 0 No -18 0.57 No 26 61.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6048083 - NM_000535 PMS2 0 . . . 3.02 65.02 22 7.21 Yes 75 0.63 No 0 0 No -21 0.97 Yes 41 67.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68321653 + NM_133509 RAD51B 0 . . . 3.09 76.63 29 5.29 No 66 -5.59 No 0 0 No -21 0.71 Yes 39 66.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68468115 + NM_133509 RAD51B 0 . . . 0.13 64.64 47 7.03 Yes 64 0.28 No 0 0 No -24 0.68 Yes 31 67.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68517300 + NM_133509 RAD51B 0 . . . 7.59 81.59 34 6.34 Yes 1 1.27 Yes 0 0 No -33 0.83 Yes 42 61.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32936377 + NM_000059 BRCA2 0 . . . 2.18 74.46 20 4.41 No 40 1.3 Yes 0 0 No -26 0.59 No 18 90.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59759349 - NM_032043 BRIP1 0 . . . 6.87 78.2 18 4.7 No 1 1.11 Yes 0 0 No -47 0.49 No 49 61.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68329238 + NM_133509 RAD51B 0 . . . 0.24 68.37 16 5.06 No 31 0.69 No 0 0 No -20 0.71 Yes 27 34.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59851661 - NM_032043 BRIP1 0 . . . 0.95 75.56 26 4.62 No 74 0.99 Yes 0 0 No -21 0.39 No 53 73.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32935770 + NM_000059 BRCA2 0 . . . 7.25 81.66 37 6.19 Yes 4 0.25 No 0 0 No -24 0.53 No 54 57.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108112127 + NM_000051 ATM 0 . . . 5.12 79.33 21 4.79 No 29 1.35 Yes 0 0 No -20 0.84 Yes 47 88.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68322658 + NM_133509 RAD51B 0 . . . 5.38 84.59 19 4.97 No 50 2.02 Yes 0 0 No -40 0.4 No 47 59.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131960113 + NM_005732 RAD50 0 . . . 0.74 0 15 5.1 No 8 0.99 Yes 0 0 No -27 0.59 No 47 59.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37044487 + NM_000249 MLH1 0 . . . 6.29 84.3 20 5.1 No 8 -2.04 No 0 0 No -25 0.68 Yes 35 58.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68998434 + NM_133509 RAD51B 0 . . . 2.25 62.77 13 6.8 Yes 18 0.96 Yes 0 0 No -40 0.43 No 40 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75489774 - NM_001040108 MLH3 0 . . . 2.79 65.48 13 5.52 No 39 -2.36 No 0 0 No -24 0.53 No 47 61.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68867565 + NM_004360 CDH1 0 . . . 7.99 78.35 54 7.64 Yes 27 0.49 No 0 0 No -28 0.57 No 44 90.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190723515 + NM_000534 PMS1 0 . . . 1.02 63.95 28 6.11 Yes 58 0.12 No 0 0 No -22 0.44 No 49 44.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190663318 + NM_000534 PMS1 0 . . . 6.81 83.27 34 7.69 Yes 74 -4.85 No 0 0 No -33 0.76 Yes 40 82.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68834686 + NM_004360 CDH1 0 . . . 3.22 64.92 50 6.63 Yes 0 0.67 No 0 0 No -39 0.55 No 42 36.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68905351 + NM_133509 RAD51B 0 . . . 4.68 71.73 38 6.41 Yes 27 0.34 No 0 0 No -37 0.45 No 31 78.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68534718 + NM_133509 RAD51B 0 . . . 3.41 61.89 28 5.35 No 58 -4.53 No 0 0 No -22 0.45 No 46 40.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68792817 + NM_004360 CDH1 0 . . . 0.78 84.22 36 4.57 No 33 1.13 Yes 0 0 No -35 0.33 No 51 33.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190670973 + NM_000534 PMS1 0 . . . 2.37 71.37 15 5.06 No 10 0.14 No 0 0 No -22 0.4 No 38 73.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131912515 + NM_005732 RAD50 0 . . . 8.2 82.38 15 4.83 No 5 1.41 Yes 0 0 No -44 0.57 No 50 60.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94186331 - NM_005591 MRE11 0 . . . 0.37 0 28 5.08 No 54 -4.78 No 0 0 No -27 0.43 No 44 64.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108234190 + NM_000051 ATM 0 . . . 5.98 78.77 34 6.91 Yes 56 1.43 Yes 0 0 No -33 0.55 No 42 89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47746848 + NM_000251 MSH2 0 . . . 9.21 80.86 24 5.76 Yes 51 1.61 Yes 0 0 No -27 0.63 No 31 71.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68322421 + NM_133509 RAD51B 0 . . . 0.9 0 33 7 Yes 71 -3.56 No 0 0 No -30 0.54 No 55 81.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56781526 + NM_058216 RAD51C 0 . . . 0.42 74.03 23 4.8 No 51 1.07 Yes 0 0 No -21 0.67 Yes 49 88.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69122345 + NM_133509 RAD51B 0 . . . 1.78 0 31 4.7 No 8 1.55 Yes 0 0 No -30 0.82 Yes 50 93.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6013351 - NM_000535 PMS2 0 . . . 0.47 80.82 23 5.2 No -3 0.24 No 0 0 No -22 0.6 No 51 58.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37051807 + NM_000249 MLH1 0 . . . 4.16 85.02 18 6.26 Yes 3 1.16 Yes 0 0 No -34 0.63 No 44 53.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52435883 - NM_004656 BAP1 0 . . . 4.72 75.12 15 4.25 No 28 1.23 Yes 0 0 No -24 0.5 No 25 61.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47683206 + NM_000251 MSH2 0 . . . 4.85 78.14 19 4.76 No 46 1.55 Yes 0 0 No -19 0.65 No 50 58.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68647859 + NM_133509 RAD51B 0 . . . 5.11 72.15 22 6.4 Yes 2 0.36 No 0 0 No -19 0.81 Yes 49 56.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131948256 + NM_005732 RAD50 0 . . . 2.8 68.17 35 5.65 Yes 42 0.39 No 0 0 No -25 0.87 Yes 35 61.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68819478 + NM_004360 CDH1 0 . . . 0.78 68.36 22 3.78 No 75 1.29 Yes 0 0 No -21 0.78 Yes 42 80.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47749388 + NM_000251 MSH2 0 . . . 0.72 64.52 30 5.57 Yes 25 0.36 No 0 0 No -29 0.81 Yes 49 65.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75493144 - NM_001040108 MLH3 0 . . . 10.2 85.9 16 4.6 No 1 1.29 Yes 0 0 No -20 0.19 No 39 78.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56800737 + NM_058216 RAD51C 0 . . . 0.88 64.33 25 4.77 No 57 1.2 Yes 0 0 No -27 0.73 Yes 48 38.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59934921 - NM_032043 BRIP1 0 . . . 3.6 85.02 34 7.66 Yes 4 1.2 Yes 0 0 No -33 0.71 Yes 54 57.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37077961 + NM_000249 MLH1 0 . . . 2.85 67.52 23 5.59 Yes -2 0.02 No 0 0 No -22 0.51 No 40 63.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90963476 - NM_002485 NBN 0 . . . 1.77 64.56 17 4.1 No 75 1.16 Yes 0 0 No -17 0.44 No 43 74.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152345587 - NM_005431 XRCC2 0 . . . 1.16 78.04 28 8.18 Yes 4 0.64 No 0 0 No -23 0.86 Yes 42 80.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59881497 - NM_032043 BRIP1 0 . . . 7.27 82.98 20 3.42 No -2 0.05 No 0 0 No -19 0.63 No 51 48.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190698279 + NM_000534 PMS1 0 . . . 2.09 80.22 31 7.43 Yes 67 -4.96 No 0 0 No -30 0.62 No 48 83.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47786294 + NM_000251 MSH2 0 . . . 0.44 0 23 4.55 No 59 1.22 Yes 0 0 No -57 0.48 No 42 83.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68502610 + NM_133509 RAD51B 0 . . . 1.72 70.48 15 5.74 Yes 40 1.23 Yes 0 0 No -26 0.39 No 46 64.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68600375 + NM_133509 RAD51B 0 . . . 3.92 86.29 16 4.69 No 9 1.23 Yes 0 0 No -15 0.49 No 49 91.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69013573 + NM_133509 RAD51B 0 . . . 1.37 72.98 20 5.1 No 13 -2.04 No 0 0 No -19 0.68 Yes 45 58.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90996174 - NM_002485 NBN 0 . . . 2.07 66.37 32 3.62 No 47 -3.62 No 0 0 No -22 0.51 No 44 73.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59859829 - NM_032043 BRIP1 0 . . . 6.43 73.55 30 6.4 Yes 35 0.66 No 0 0 No -21 0.62 No 34 84.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68674075 + NM_133509 RAD51B 0 . . . 5.89 78.42 19 5.47 No 39 0.92 Yes 0 0 No -23 0.62 No 44 51.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152358213 - NM_005431 XRCC2 0 . . . 1.38 0 18 4.9 No 57 1.26 Yes 0 0 No -22 0.43 No 45 44.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190705489 + NM_000534 PMS1 0 . . . 3.3 67.42 28 7.27 Yes 64 -6.05 No 0 0 No -27 0.54 No 40 61.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75484631 - NM_001040108 MLH3 0 . . . 6.23 80.23 29 5.92 Yes 57 1.36 Yes 0 0 No -28 0.35 No 43 58.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108180744 + NM_000051 ATM 0 . . . 7.27 79.74 62 8.81 Yes -2 0.68 No 0 0 No -32 0.46 No 43 89.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84392996 - NM_139076 FAM175A 0 . . . 4.71 84.17 36 5.9 Yes 74 0.9 Yes 0 0 No -29 0.55 No 11 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131911775 + NM_005732 RAD50 0 . . . 1.18 80.23 33 6.24 Yes 44 0.35 No 0 0 No -32 0.49 No 51 49.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144159 + NM_133509 RAD51B 0 . . . 6.2 77.93 39 6.32 Yes 38 0.59 No 0 0 No -24 0.5 No 46 76.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68543087 + NM_133509 RAD51B 0 . . . 0.47 77.57 22 4.58 No 44 0.54 No 0 0 No -21 0.67 Yes 51 86.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47646199 + NM_000251 MSH2 0 . . . 1.12 81.83 28 5.83 Yes 57 0.44 No 0 0 No -27 0.87 Yes 16 23.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68888528 + NM_133509 RAD51B 0 . . . 3.99 73.92 31 5.56 Yes 71 1.07 Yes 0 0 No -30 0.83 Yes 42 78.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68935814 + NM_133509 RAD51B 0 . . . 6.64 75.49 19 5.39 No 20 0.05 No 0 0 No -25 0.48 No 38 85.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69114657 + NM_133509 RAD51B 0 . . . 4.39 71.09 41 6.47 Yes 30 0.68 No 0 0 No -28 0.62 No 41 63.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69131836 + NM_133509 RAD51B 0 . . . 2.03 73.92 9 5.74 Yes 17 1.43 Yes 0 0 No -26 0.19 No 33 83.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68846841 + NM_133509 RAD51B 0 . . . 3.55 75.38 42 5.05 No 42 0.63 No 0 0 No -31 0.71 Yes 42 86.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21988085 - NM_000077 CDKN2A 0 . . . 1.11 67.06 26 6.24 Yes 65 -6.01 No 0 0 No -25 0.66 No 51 54.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68854514 + NM_004360 CDH1 0 . . . 7.12 84.9 24 5.48 No 19 1.72 Yes 0 0 No -23 0.74 Yes 39 75.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23624864 - NM_024675 PALB2 0 . . . 3.83 83.64 35 6 Yes 33 1 Yes 0 0 No -28 0.84 Yes 44 42.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68504122 + NM_133509 RAD51B 0 . . . 1.83 79.69 26 6.23 Yes 7 1.02 Yes 0 0 No -21 0.5 No 51 81.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69134221 + NM_133509 RAD51B 0 . . . 1.57 65.49 26 6.28 Yes 56 1.23 Yes 0 0 No -24 0.48 No 61 30.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68580553 + NM_133509 RAD51B 0 . . . 1.81 0 21 4.27 No 56 0.65 No 0 0 No -31 0.37 No 48 76.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68291156 + NM_133509 RAD51B 0 . . . 1.95 79.61 16 4 No 4 0.9 Yes 0 0 No -34 0.68 Yes 54 56.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104182854 - NM_001100119 XRCC3 0 . . . 6.53 87.43 17 5.57 Yes NA NA NA 0 0 No -27 0.43 No 47 47.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68606336 + NM_133509 RAD51B 0 . . . 3.95 73.64 16 5.27 No -4 0.76 No 0 0 No -26 0.75 Yes 48 53.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59758106 - NM_032043 BRIP1 0 . . . 0.09 74.68 35 7.96 Yes 4 0.41 No 0 0 No -34 0.72 Yes 54 88.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33432559 - NM_002878 RAD51D 0 . . . 7.43 71.06 39 5.08 No -3 0.96 Yes 0 0 No -38 0.58 No 42 83.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94165325 - NM_005591 MRE11 0 . . . 9.03 86.34 25 5.29 No 36 0.72 No 0 0 No -24 0.92 Yes 45 85.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190684675 + NM_000534 PMS1 0 . . . 3.24 70.24 13 5.31 No 14 0.22 No 0 0 No -26 0.75 Yes 44 92.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68735346 + NM_133509 RAD51B 0 . . . 2.65 66.81 22 5.74 Yes 28 -2.36 No 0 0 No -21 0.82 Yes 52 42.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45806297 - NM_001048171 MUTYH 0 . . . 0.51 72.61 37 7.07 Yes 55 -3.3 No 0 0 No -36 0.83 Yes 47 31.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69058485 + NM_133509 RAD51B 0 . . . 6.49 83.48 29 6.58 Yes 40 1.74 Yes 0 0 No -26 0.63 No 30 60.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89656130 + NM_000314 PTEN 0 . . . 0.82 0 20 5.55 No 65 0.01 No 0 0 No -24 0.85 Yes 52 73.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108123680 + NM_000051 ATM 0 . . . 0.59 0 36 7.79 Yes 14 1.32 Yes 0 0 No -35 0.68 Yes 41 77.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68596986 + NM_133509 RAD51B 0 . . . 5.14 72.88 17 4.69 No 13 1.52 Yes 0 0 No -17 0.31 No 45 91.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68784862 + NM_133509 RAD51B 0 . . . 1.2 70.4 15 4.58 No 38 -3.08 No 0 0 No -21 0.46 No 51 77.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59780889 - NM_032043 BRIP1 0 . . . 2.69 78.22 28 7.75 Yes -4 0.47 No 0 0 No -21 0.64 No 51 61.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84392971 - NM_139076 FAM175A 0 . . . 1.96 68.98 27 5.74 Yes 19 -1.28 No 0 0 No -26 0.68 Yes 50 50.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69005282 + NM_133509 RAD51B 0 . . . 7.49 92.63 39 6.56 Yes 49 0.4 No 0 0 No -38 0.89 Yes 40 76.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68819681 + NM_004360 CDH1 0 . . . 1.35 80.26 27 6.12 Yes 67 1.14 Yes 0 0 No -26 0.74 Yes 52 44.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32920333 + NM_000059 BRCA2 0 . . . 10.05 99.37 26 6.56 Yes 38 1.35 Yes 0 0 No -25 0.89 Yes 45 84.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68523906 + NM_133509 RAD51B 0 . . . 0.45 68.36 33 5.91 Yes 53 -4.93 No 0 0 No -32 0.42 No 52 51.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47728499 + NM_000251 MSH2 0 . . . 0.6 0 18 7 Yes 18 0.84 Yes 0 0 No -17 0.46 No 35 83.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108144149 + NM_000051 ATM 0 . . . 4.45 81.55 45 7.55 Yes 35 -1.61 No 0 0 No -38 0.49 No 44 59.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68788701 + NM_133509 RAD51B 0 . . . 1.07 78.8 37 5.94 Yes 33 1.17 Yes 0 0 No -31 0.62 No 25 76.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89673007 + NM_000314 PTEN 0 . . . 1.66 0 23 5.11 No 12 0.87 Yes 0 0 No -22 0.71 Yes 46 91.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7577944 - NM_000546 TP53 0 . . . 0.32 74.68 22 4.69 No 38 0.51 No 0 0 No -21 0.97 Yes 54 85.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37066260 + NM_000249 MLH1 0 . . . 0.87 0 24 5.75 Yes 35 1.49 Yes 0 0 No -34 0.63 No 23 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190723613 + NM_000534 PMS1 0 . . . 3.46 89.53 38 5.87 Yes 4 1.14 Yes 0 0 No -37 0.5 No 49 78.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37076630 + NM_000249 MLH1 0 . . . 2.42 74.54 21 4.9 No 69 0.95 Yes 0 0 No -20 0.66 No 46 47.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68659308 + NM_133509 RAD51B 0 . . . 4.47 76.11 30 5.74 Yes 58 -4.22 No 0 0 No -29 0.73 Yes 49 67.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84391296 - NM_139076 FAM175A 0 . . . 1.33 67.59 20 4.83 No -4 0.55 No 0 0 No -50 0.69 Yes 45 91.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41275103 - NM_007294 BRCA1 0 . . . 0.58 68.4 28 5.31 No 52 0.51 No 0 0 No -25 0.6 No 48 40.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1228908 + NM_000455 STK11 0 . . . 7.45 83.02 26 7.38 Yes 10 1.73 Yes 0 0 No -25 0.43 No 48 72.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68828858 + NM_004360 CDH1 0 . . . 6.77 71.57 33 6.85 Yes 21 1.72 Yes 0 0 No -32 0.87 Yes 37 84.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32889189 + NM_000059 BRCA2 0 . . . 0.22 62.17 26 5.28 No 12 0.76 No 0 0 No -25 0.76 Yes 21 40.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131906462 + NM_005732 RAD50 0 . . . 2.09 62.31 32 5.76 Yes 54 1.04 Yes 0 0 No -31 0.67 Yes 37 71.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47788437 + NM_000251 MSH2 0 . . . 4.37 76.03 23 4.9 No 13 1.92 Yes 0 0 No -22 0.82 Yes 45 70.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41018714 + NM_001164269 RAD51 0 . . . 6.86 77.86 34 4.78 No 22 1.57 Yes 0 0 No -26 0.46 No 46 73.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32945856 + NM_000059 BRCA2 0 . . . 4.2 76.59 24 5.47 No 61 0.68 No 0 0 No -23 0.84 Yes 40 51.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108100350 + NM_000051 ATM 0 . . . 1.83 68.53 24 6.82 Yes 5 1.07 Yes 0 0 No -23 0.73 Yes 42 52.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32896850 + NM_000059 BRCA2 0 . . . 0.93 0 14 5.11 No 51 -1.79 No 0 0 No -25 0.51 No 37 77.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89662475 + NM_000314 PTEN 0 . . . 6.23 76.46 23 4.85 No 40 0.5 No 0 0 No -22 0.57 No 42 88.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68685504 + NM_133509 RAD51B 0 . . . 2.22 70 23 4.76 No 66 0.19 No 0 0 No -23 0.66 No 44 63.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29118427 - NM_001005735 CHEK2 0 . . . 4.42 84.22 44 6.85 Yes 8 1.13 Yes 0 0 No -23 0.84 Yes 50 95.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68353570 + NM_133509 RAD51B 0 . . . 7.78 89.5 23 7.35 Yes 51 1.24 Yes 0 0 No -22 0.88 Yes 44 82.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52445192 - NM_004656 BAP1 0 . . . 3.2 57.96 25 4.08 No 56 0.53 No 0 0 No -24 0.92 Yes 43 76.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94150728 - NM_005591 MRE11 0 . . . 3.45 74.93 17 5.1 No 44 0.9 Yes 0 0 No -24 0.56 No 48 54.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68489316 + NM_133509 RAD51B 0 . . . 8.23 80.93 25 5.09 No 44 1.02 Yes 0 0 No -25 0.47 No 35 67.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68372146 + NM_133509 RAD51B 0 . . . 0.55 0 9 5.14 No 44 0.42 No 0 0 No -20 0.51 No 26 79.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108094169 + NM_000051 ATM 0 . . . 1.03 0 21 4.97 No 63 1.82 Yes 0 0 No -20 0.79 Yes 23 60.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89634780 + NM_000314 PTEN 0 . . . 2.76 66.11 18 6.99 Yes 2 0.2 No 0 0 No -28 0.5 No 42 86.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108149233 + NM_000051 ATM 0 . . . 2.59 0 16 5.57 Yes 42 0.7 No 0 0 No -22 0.72 Yes 29 61.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47698365 + NM_000251 MSH2 0 . . . 0.54 74.49 25 5.1 No 40 0.48 No 0 0 No -25 0.81 Yes 44 29.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94163571 - NM_005591 MRE11 0 . . . 6.31 81.07 28 6.16 Yes 46 0.22 No 0 0 No -25 0.48 No 45 61.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47671727 + NM_000251 MSH2 0 . . . 5.42 77.72 23 5.95 Yes 65 0.73 No 0 0 No -22 0.71 Yes 50 78.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68729176 + NM_133509 RAD51B 0 . . . 1.02 75.15 28 5.28 No 53 1.72 Yes 0 0 No -22 0.55 No 48 59.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68683262 + NM_133509 RAD51B 0 . . . 1.82 0 21 5.48 No 58 0.5 No 0 0 No -26 0.7 Yes 39 47.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89705756 + NM_000314 PTEN 0 . . . 4.21 77.53 26 5.2 No 70 -5.69 No 0 0 No -26 0.52 No 47 28.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68479166 + NM_133509 RAD51B 0 . . . 5.1 69.7 33 4.82 No 58 -4.24 No 0 0 No -26 0.84 Yes 44 43.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68585376 + NM_133509 RAD51B 0 . . . 2.77 0 36 5.9 Yes 61 -3.04 No 0 0 No -31 0.45 No 42 37.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68455259 + NM_133509 RAD51B 0 . . . 0.33 0 50 6.26 Yes 72 -3.21 No 0 0 No -34 0.62 No 41 58.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68946834 + NM_133509 RAD51B 0 . . . 6.07 84.17 32 4.34 No 46 0.86 Yes 0 0 No -31 0.51 No 44 59.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215636288 - NM_000465 BARD1 0 . . . 7.56 91.79 28 5.81 Yes 4 1.18 Yes 0 0 No -27 0.42 No 54 67.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69019605 + NM_133509 RAD51B 0 . . . 1.93 72 39 5.54 No 70 -4.8 No 0 0 No -30 0.54 No 47 24.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90960382 - NM_002485 NBN 0 . . . 1.21 66.3 19 5.74 Yes 21 0.49 No 0 0 No -22 0.58 No 34 93.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41013886 + NM_001164269 RAD51 0 . . . 5.74 77.95 17 4.8 No 66 -4.95 No 0 0 No -30 0.59 No 38 62.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68289573 + NM_133509 RAD51B 0 . . . 2.63 80.13 15 3.91 No 66 0.21 No 0 0 No -59 0.77 Yes 49 51.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68333833 + NM_133509 RAD51B 0 . . . 5.06 70.84 11 4.12 No 49 -4.18 No 0 0 No -33 0.68 Yes 43 44.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69115433 + NM_133509 RAD51B 0 . . . 1.5 69.78 25 6 Yes 71 -6.35 No 0 0 No -24 0.39 No 48 23.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94185126 - NM_005591 MRE11 0 . . . 2.89 68.34 18 5.35 No 13 0.83 Yes 0 0 No -23 0.66 Yes 45 58.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108110892 + NM_000051 ATM 0 . . . 0.01 62.4 24 5.19 No 24 -1.85 No 0 0 No -13 0.27 No 34 66.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75491198 - NM_001040108 MLH3 0 . . . 1.25 67.06 20 4.49 No 74 -4.97 No 0 0 No -23 0.89 Yes 46 21.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108216683 + NM_000051 ATM 0 . . . 7.75 92.1 16 6.16 Yes 33 1.17 Yes 0 0 No -31 0.76 Yes 46 70.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48017658 + NM_000179 MSH6 0 . . . 1.07 68.95 37 5.84 Yes 57 -3.21 No 0 0 No -28 0.49 No 49 70.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68307951 + NM_133509 RAD51B 0 . . . 2.09 81.23 30 5.57 Yes 30 0.58 No 0 0 No -52 0.73 Yes 43 60.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68630384 + NM_133509 RAD51B 0 . . . 6.42 78.34 44 7.05 Yes 41 1.61 Yes 0 0 No -22 0.86 Yes 51 60.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190709455 + NM_000534 PMS1 0 . . . 3.42 0 18 4.9 No 15 0.11 No 0 0 No -22 0.3 No 42 82.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29091581 - NM_001005735 CHEK2 0 . . . 4.19 70.31 14 5.1 No 61 -1.39 No 0 0 No -27 0.41 No 63 41.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37073024 + NM_000249 MLH1 0 . . . 0.18 0 14 3.55 No 66 -3.51 No 0 0 No -28 0.86 Yes 35 59.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68949721 + NM_133509 RAD51B 0 . . . 2.77 71.06 21 8.3 Yes 11 -2.09 No 0 0 No -20 0.43 No 42 64.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190666751 + NM_000534 PMS1 0 . . . 7.44 77.51 28 5.38 No 10 1.26 Yes 0 0 No -22 0.67 Yes 48 62.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59903653 - NM_032043 BRIP1 0 . . . 4.94 0 48 6.93 Yes 41 0.11 No 0 0 No -34 0.72 Yes 49 51.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190654285 + NM_000534 PMS1 0 . . . 1.91 72.12 39 6.36 Yes 45 -2.84 No 0 0 No -28 0.73 Yes 39 71.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21990477 - NM_000077 CDKN2A 0 . . . 2.78 68.16 29 5.29 No 65 1.15 Yes 0 0 No -24 0.66 No 45 65.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89725466 + NM_000314 PTEN 0 . . . 6.57 81.32 23 4.67 No 55 1.08 Yes 0 0 No -22 0.65 No 44 84.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59786438 - NM_032043 BRIP1 0 . . . 0.69 60.81 14 5.57 Yes 73 -5.76 No 0 0 No -26 0.46 No 43 40.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94181836 - NM_005591 MRE11 0 . . . 7.11 87.14 29 6.25 Yes 8 0.74 No 0 0 No -28 0.52 No 50 74.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68834666 + NM_133509 RAD51B 0 . . . 1.98 62.01 28 4.35 No 39 0.5 No 0 0 No -27 0.77 Yes 19 61.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68704760 + NM_133509 RAD51B 0 . . . 2.3 69.99 24 5.26 No 68 1.17 Yes 0 0 No -26 0.64 No 45 56.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68766515 + NM_133509 RAD51B 0 . . . 5.44 71.18 23 5.23 No 38 1.25 Yes 0 0 No -22 0.88 Yes 40 53.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6030005 - NM_000535 PMS2 0 . . . 5.35 72.5 20 5.09 No 1 1.22 Yes 0 0 No -19 0.55 No 42 57.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75482415 - NM_001040108 MLH3 0 . . . 1.09 67.48 25 5.2 No 14 0.78 Yes 0 0 No -51 0.56 No 31 66.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68371721 + NM_133509 RAD51B 0 . . . 0.73 0 30 5.47 No 5 0.7 No 0 0 No -22 0.59 No 36 89.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68988421 + NM_133509 RAD51B 0 . . . 8.98 80.85 49 6.19 Yes 18 0.21 No 0 0 No -28 0.82 Yes 40 62.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37071501 + NM_000249 MLH1 0 . . . 6.04 86.09 20 5 No 4 1.15 Yes 0 0 No -25 0.45 No 54 69.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68792976 + NM_004360 CDH1 0 . . . 2.15 83.52 16 5.1 No 37 1.61 Yes 0 0 No -27 0.67 Yes 52 35.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90962146 - NM_002485 NBN 0 . . . 7.44 83.64 67 8.14 Yes 31 0.3 No 0 0 No -23 0.74 Yes 44 52.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32974990 + NM_000059 BRCA2 0 . . . 2.77 69.25 24 5.17 No 76 0.17 No 0 0 No -53 0.48 No 48 43.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68604231 + NM_133509 RAD51B 0 . . . 5.24 75.41 31 5.56 Yes 30 1.84 Yes 0 0 No -25 0.8 Yes 48 49.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59839224 - NM_032043 BRIP1 0 . . . 1.55 67.69 31 5.57 Yes 13 -1.99 No 0 0 No -24 0.68 Yes 52 37.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68892003 + NM_133509 RAD51B 0 . . . 0.29 0 10 5.44 No 8 1.27 Yes 0 0 No -39 0.7 Yes 42 91.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59940563 - NM_032043 BRIP1 0 . . . 0.38 72.43 23 4.9 No 1 0.44 No 0 0 No -22 0.93 Yes 57 32.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190725132 + NM_000534 PMS1 0 . . . 1.32 65.64 28 5.23 No 18 1.31 Yes 0 0 No -22 0.73 Yes 44 87.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47653405 + NM_000251 MSH2 0 . . . 4.42 84.22 20 7.14 Yes 8 1.13 Yes 0 0 No -19 0.79 Yes 50 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48024265 + NM_000179 MSH6 0 . . . 5.82 79.33 13 5.28 No 29 0.75 No 0 0 No -25 0.56 No 38 57.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21981897 - NM_000077 CDKN2A 0 . . . 6.48 86.59 22 5.2 No 67 -0.4 No 0 0 No -22 0.33 No 49 64.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69129323 + NM_133509 RAD51B 0 . . . 2.52 79.64 23 5.39 No 18 1.56 Yes 0 0 No -22 0.52 No 40 83.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190704236 + NM_000534 PMS1 0 . . . 5.22 0 19 4.59 No 21 0.58 No 0 0 No -19 0.57 No 41 74.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1220005 + NM_000455 STK11 0 . . . 5.19 77.06 25 4.88 No 40 0.37 No 25 0.36 Yes -46 0.48 No 51 69.66 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr16 68860234 + NM_004360 CDH1 0 . . . 8.57 84.2 47 7.87 Yes 20 0.66 No 0 0 No -32 0.63 No 38 64.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68792542 + NM_133509 RAD51B 0 . . . 5.37 67.68 16 4.69 No 64 1 Yes 0 0 No -29 0.57 No 43 70.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108180122 + NM_000051 ATM 0 . . . 1.14 0 27 5.1 No 44 0.26 No 0 0 No -25 0.79 Yes 53 58.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108113995 + NM_000051 ATM 0 . . . 6.36 79.95 28 5.03 No 58 0.42 No 0 0 No -27 0.54 No 41 47.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68692307 + NM_133509 RAD51B 0 . . . 3.02 73.12 22 4.8 No 71 0.63 No 0 0 No -21 0.88 Yes 43 50.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68452209 + NM_133509 RAD51B 0 . . . 6.27 75.39 22 4.88 No 40 1.01 Yes 0 0 No -21 0.54 No 35 60.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75494679 - NM_001040108 MLH3 0 . . . 7.63 84.39 30 6.57 Yes 63 0.13 No 0 0 No -29 0.76 Yes 47 73.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1225933 + NM_000455 STK11 0 . . . 1 80.22 44 6.78 Yes 21 -1.62 No 0 0 No -36 0.74 Yes 37 49.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68654915 + NM_133509 RAD51B 0 . . . 1.84 75.78 18 4.68 No 45 0.89 Yes 0 0 No -21 0.6 No 13 68.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131897674 + NM_005732 RAD50 0 . . . 6.82 75.35 19 5 No 16 2.01 Yes 0 0 No -49 0.66 No 42 89.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32944055 + NM_000059 BRCA2 0 . . . 3.5 73.56 29 5.17 No 50 0.3 No 0 0 No -23 0.62 No 46 32.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48021146 + NM_000179 MSH6 0 . . . 0.55 0 38 6.15 Yes 35 1.55 Yes 0 0 No -43 0.73 Yes 29 46.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131915716 + NM_005732 RAD50 0 . . . 2.65 74.21 47 7.67 Yes 53 -4.96 No 0 0 No -33 0.71 Yes 58 55.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68796961 + NM_004360 CDH1 0 . . . 2.47 80.8 18 5.67 Yes 29 0.69 No 0 0 No -26 0.67 Yes 20 28.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69075557 + NM_133509 RAD51B 0 . . . 0.04 76.03 28 5.09 No 39 -1.34 No 0 0 No -27 0.62 No 50 59.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84397253 - NM_139076 FAM175A 0 . . . 4.04 80.6 25 5.18 No 4 1.58 Yes 0 0 No -28 0.43 No 49 85.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47727944 + NM_000251 MSH2 0 . . . 8.93 91.45 26 5.5 No 22 1.46 Yes 0 0 No -26 0.5 No 36 86.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68728305 + NM_133509 RAD51B 0 . . . 3.25 68.41 21 4.99 No 25 -3.53 No 0 0 No -26 0.67 Yes 44 42.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68389870 + NM_133509 RAD51B 0 . . . 2.31 75.99 18 4.76 No 3 0.83 Yes 0 0 No -24 0.6 No 33 64.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32959421 + NM_000059 BRCA2 0 . . . 0.86 0 25 5.03 No 63 0.71 No 0 0 No -24 0.81 Yes 38 81.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89695706 + NM_000314 PTEN 0 . . . 5.11 84.64 15 4.52 No 6 0.28 No 0 0 No -20 0.42 No 49 74.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90994720 - NM_002485 NBN 0 . . . 7.49 79.22 28 4.49 No 6 0.98 Yes 0 0 No -23 0.59 No 48 71.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41220719 - NM_007294 BRCA1 0 . . . 1.1 0 22 5.29 No 6 0.92 Yes 0 0 No -21 0.64 No 46 82.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90973856 - NM_002485 NBN 0 . . . 6.91 81.48 31 6.15 Yes 66 -0.75 No 0 0 No -30 0.54 No 43 70.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56779033 + NM_058216 RAD51C 0 . . . 2.55 66.46 15 5.39 No 16 0.64 No 0 0 No -30 0.46 No 42 81.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108153311 + NM_000051 ATM 0 . . . 8.52 77.27 29 7.35 Yes 67 0.58 No 0 0 No -28 0.91 Yes 40 69.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89722527 + NM_000314 PTEN 0 . . . 5.48 83.49 21 4.65 No 6 0.62 No 0 0 No -21 0.61 No 46 43.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47654930 + NM_000251 MSH2 0 . . . 2.73 72.84 28 5.27 No -3 0.37 No 0 0 No -27 0.87 Yes 48 34.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47680354 + NM_000251 MSH2 0 . . . 9.28 86.55 20 4.23 No 29 0.65 No 0 0 No -19 0.62 No 40 72.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131891639 + NM_005732 RAD50 0 . . . 6.08 81.74 30 4.43 No 5 0.93 Yes 0 0 No -29 0.62 No 44 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59757781 - NM_032043 BRIP1 0 . . . 4.58 74.26 14 4.47 No 9 0.06 No 0 0 No -43 0.58 No 49 78.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59832006 - NM_032043 BRIP1 0 . . . 3.76 79.52 28 7.28 Yes 66 0.91 Yes 0 0 No -27 0.9 Yes 46 78.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59908666 - NM_032043 BRIP1 0 . . . 6.68 81.14 24 3.51 No 49 0.46 No 0 0 No -22 0.44 No 42 64.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59873826 - NM_032043 BRIP1 0 . . . 5.62 87.56 20 4.9 No 70 -3.29 No 0 0 No -25 0.31 No 32 59.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68377258 + NM_133509 RAD51B 0 . . . 6.76 85 37 6.66 Yes 12 0.82 Yes 0 0 No -31 0.4 No 46 76.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90996264 - NM_002485 NBN 0 . . . 4.64 69.61 10 4 No 31 0.84 Yes 0 0 No -29 0.73 Yes 44 88.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68771239 + NM_133509 RAD51B 0 . . . 7.42 76.05 15 5.1 No 73 0.55 No 0 0 No -14 0.5 No 43 79.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68775150 + NM_133509 RAD51B 0 . . . 4.15 68.96 49 6.13 Yes 10 -1.38 No 0 0 No -27 0.5 No 49 71.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108136286 + NM_000051 ATM 0 . . . 3.67 82.91 18 4.96 No 69 -4.9 No 0 0 No -29 0.85 Yes 54 32.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75485598 - NM_001040108 MLH3 0 . . . 2.04 0 18 4.8 No 7 0.95 Yes 0 0 No -44 0.73 Yes 51 94.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108204347 + NM_000051 ATM 0 . . . 4.75 72.22 16 5.05 No 73 1.02 Yes 0 0 No -21 0.92 Yes 42 67.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37078085 + NM_000249 MLH1 0 . . . 4.54 73.34 24 6.74 Yes 11 0.87 Yes 0 0 No -26 0.47 No 47 94.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37036196 + NM_000249 MLH1 0 . . . 0.88 69.81 30 8.23 Yes 43 0.07 No 0 0 No -29 0.89 Yes 29 63.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152349529 - NM_005431 XRCC2 0 . . . 1.36 76.6 53 6.62 Yes 57 -3.29 No 0 0 No -29 0.53 No 30 57.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68765979 + NM_133509 RAD51B 0 . . . 6.15 75.42 31 5.1 No 72 -4.97 No 0 0 No -30 0.62 No 45 76.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32926318 + NM_000059 BRCA2 0 . . . 5.38 92.36 16 5.29 No 67 1.53 Yes 0 0 No -21 0.56 No 35 75.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68776479 + NM_133509 RAD51B 0 . . . 1.24 61.52 22 3.39 No 44 0.62 No 0 0 No -38 0.46 No 29 35.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68745254 + NM_133509 RAD51B 0 . . . 1.32 0 20 4.39 No 29 0.75 No 0 0 No -19 0.36 No 29 42.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59767775 - NM_032043 BRIP1 0 . . . 2.64 81.72 16 4.24 No 53 1.04 Yes 0 0 No -33 0.4 No 35 64.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68346760 + NM_133509 RAD51B 0 . . . 4.5 83 30 4.71 No 57 0.54 No 0 0 No -29 0.85 Yes 48 56.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47723835 + NM_000251 MSH2 0 . . . 3.03 69.22 29 6.48 Yes 36 -2.61 No 0 0 No -28 0.96 Yes 40 86.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32954940 + NM_000059 BRCA2 0 . . . 0.91 68.34 30 4.01 No 30 1.11 Yes 0 0 No -27 0.67 Yes 14 44.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6020554 - NM_000535 PMS2 0 . . . 4.71 75.59 29 5.56 Yes 29 0.9 Yes 0 0 No -28 0.66 Yes 49 89.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68853853 + NM_004360 CDH1 0 . . . 0.54 74.23 60 8.46 Yes 8 1.73 Yes 0 0 No -23 0.63 No 54 80.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68763316 + NM_133509 RAD51B 0 . . . 1.34 69.63 27 4.03 No 30 0.28 No 0 0 No -26 0.62 No 28 62.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68980240 + NM_133509 RAD51B 0 . . . 2.31 70.91 20 4.47 No 47 -3.84 No 0 0 No -19 0.94 Yes 41 54.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68820119 + NM_004360 CDH1 0 . . . 4.77 84.17 18 5.56 Yes 73 1.19 Yes 0 0 No -24 0.87 Yes 16 44.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90983658 - NM_002485 NBN 0 . . . 8.42 89.26 30 4.57 No 45 0.77 Yes 0 0 No -29 0.65 No 46 77.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68368680 + NM_133509 RAD51B 0 . . . 4.83 81.1 23 4.95 No 69 -4.81 No 0 0 No -22 0.48 No 44 73.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59890911 - NM_032043 BRIP1 0 . . . 0.12 72.32 75 9.43 Yes 33 1.09 Yes 0 0 No -36 0.72 Yes 25 68.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68798450 + NM_004360 CDH1 0 . . . 0.92 76.63 51 5.93 Yes 57 -3.72 No 0 0 No -32 0.31 No 48 79.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89625864 + NM_000314 PTEN 0 . . . 4.88 85.37 26 4.91 No 30 0.17 No 0 0 No -26 0.73 Yes 41 73.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89695559 + NM_000314 PTEN 0 . . . 0.9 77.47 30 5.47 No 73 -2.42 No 0 0 No -29 0.6 No 44 72.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37060304 + NM_000249 MLH1 0 . . . 1.11 67.96 19 6 Yes 32 1.03 Yes 0 0 No -18 0.7 Yes 43 48.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68467761 + NM_133509 RAD51B 0 . . . 4.35 81.01 17 4.12 No 63 0.67 No 0 0 No -26 0.44 No 47 39.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32940294 + NM_000059 BRCA2 0 . . . 1.75 75.33 62 9.07 Yes 35 -3.18 No 0 0 No -33 0.36 No 50 89.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215647969 - NM_000465 BARD1 0 . . . 4.03 68.87 43 6.94 Yes 75 0.26 No 0 0 No -33 0.8 Yes 43 86.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23625124 - NM_024675 PALB2 0 . . . 4.87 89 29 5.23 No 4 0.56 No 0 0 No -51 0.35 No 39 81.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84381246 - NM_139076 FAM175A 0 . . . 1.35 65.62 22 4.92 No 73 -5.44 No 0 0 No -21 0.7 Yes 40 23.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90953727 - NM_002485 NBN 0 . . . 1.49 74.22 18 3.91 No 51 0.98 Yes 0 0 No -32 0.37 No 62 38.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6041946 - NM_000535 PMS2 0 . . . 6.3 80.97 19 4.28 No 62 0.8 Yes 0 0 No -22 0.54 No 39 70.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59903665 - NM_032043 BRIP1 0 . . . 1.9 70.73 25 5.48 No 29 0.12 No 0 0 No -24 0.69 Yes 23 90.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47670917 + NM_000251 MSH2 0 . . . 0.47 72.3 20 7.07 Yes 60 -1.13 No 0 0 No -19 0.57 No 51 35.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69064993 + NM_133509 RAD51B 0 . . . 9.05 87.58 20 4.89 No 25 0.99 Yes 0 0 No -19 0.62 No 41 69.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47799977 + NM_000251 MSH2 0 . . . 5.34 81.83 18 4.9 No 57 0.33 No 0 0 No -35 0.38 No 48 46.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47773985 + NM_000251 MSH2 0 . . . 0.86 66.77 15 4.58 No 72 -5.81 No 0 0 No -57 0.65 No 54 50.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68673690 + NM_133509 RAD51B 0 . . . 4.84 85.02 22 4.79 No 6 1.26 Yes 0 0 No -59 0.47 No 52 77.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105202742 + NM_021930 RINT1 0 . . . 6.86 91.93 23 5 No 14 0.44 No 0 0 No -22 0.88 Yes 44 77.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47658371 + NM_000251 MSH2 0 . . . 5.53 85.29 23 4.35 No 3 1.09 Yes 0 0 No -22 0.86 Yes 48 71.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68802420 + NM_004360 CDH1 0 . . . 8.9 89.58 22 5.29 No 6 0.92 Yes 0 0 No -21 0.39 No 32 41.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68571371 + NM_133509 RAD51B 0 . . . 0.24 0 22 4.9 No 53 0.51 No 0 0 No -21 0.92 Yes 37 59.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215588805 - NM_000465 BARD1 0 . . . 4.31 80.55 19 5.9 Yes 28 0.82 Yes 0 0 No -31 0.75 Yes 49 64.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59772293 - NM_032043 BRIP1 0 . . . 2.07 64.99 32 5.65 Yes 22 0.1 No 0 0 No -34 0.82 Yes 36 75.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89641463 + NM_000314 PTEN 0 . . . 4.05 83.46 17 5.18 No 75 -1.87 No 0 0 No -31 0.34 No 43 64.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41212976 - NM_007294 BRCA1 0 . . . 1.54 85.51 38 5.18 No 74 0.05 No 0 0 No -37 0.44 No 49 54.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68680188 + NM_133509 RAD51B 0 . . . 1.11 0 38 7.53 Yes 24 -2.48 No 0 0 No -37 0.74 Yes 52 37.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41274759 - NM_007294 BRCA1 0 . . . 9.41 87.64 23 5.05 No 72 0.84 Yes 0 0 No -28 0.83 Yes 44 75.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68752043 + NM_133509 RAD51B 0 . . . 3.74 67.17 37 7.9 Yes 48 1 Yes 0 0 No -36 0.83 Yes 49 52.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89666127 + NM_000314 PTEN 0 . . . 2.96 77.29 23 4.07 No 1 1.09 Yes 0 0 No -17 0.89 Yes 44 97.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59824274 - NM_032043 BRIP1 0 . . . 3.62 70.28 22 4.79 No 46 0.73 No 0 0 No -44 0.84 Yes 52 64.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59886566 - NM_032043 BRIP1 0 . . . 1.19 65.86 25 5 No 19 0.73 No 0 0 No -18 0.44 No 30 59.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131920087 + NM_005732 RAD50 0 . . . 3.61 0 10 5.1 No 48 1.26 Yes 0 0 No -32 0.61 No 22 89.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68873498 + NM_133509 RAD51B 0 . . . 1.38 58.82 27 5.74 Yes 36 0.95 Yes 0 0 No -26 0.85 Yes 41 36.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32968542 + NM_000059 BRCA2 0 . . . 6.38 82 20 3.6 No 32 0.05 No 0 0 No -15 0.52 No 46 69.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94160318 - NM_005591 MRE11 0 . . . 2.89 72.86 22 5.94 Yes 22 1.17 Yes 0 0 No -31 0.54 No 36 52.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90947475 - NM_002485 NBN 0 . . . 5.97 87.38 28 5.83 Yes 32 0.98 Yes 0 0 No -27 0.71 Yes 50 69.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48034316 + NM_000179 MSH6 0 . . . 1.88 0 18 4.9 No 66 -2.77 No 0 0 No -26 0.3 No 33 49.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131961245 + NM_005732 RAD50 0 . . . 10.28 91.94 9 3.87 No 15 0.59 No 0 0 No -28 0.83 Yes 43 75.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59913507 - NM_032043 BRIP1 0 . . . 0.89 0 33 5.01 No 70 -4.65 No 0 0 No -19 0.51 No 38 61.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84384199 - NM_139076 FAM175A 0 . . . 1.87 54.93 26 5.42 No 43 0.92 Yes 0 0 No -11 0.61 No 46 43.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33427370 - NM_002878 RAD51D 0 . . . 3.31 81.01 23 5.09 No 3 0.86 Yes 0 0 No -22 0.76 Yes 46 64.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108154757 + NM_000051 ATM 0 . . . 2.29 68.36 33 3.8 No 39 0.78 Yes 0 0 No -27 0.44 No 49 51.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41263202 - NM_007294 BRCA1 0 . . . 0.3 66.22 24 5.47 No 34 0.74 No 0 0 No -36 0.6 No 44 22.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47762666 + NM_000251 MSH2 0 . . . 3.51 73.12 23 5.39 No 64 1.18 Yes 0 0 No -22 0.41 No 37 88.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68868958 + NM_004360 CDH1 0 . . . 4.66 76.7 23 4.9 No 56 0.95 Yes 0 0 No -22 0.96 Yes 42 66.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75492944 - NM_001040108 MLH3 0 . . . 4.98 78.49 18 5.21 No 49 1.54 Yes 0 0 No -23 0.77 Yes 42 86.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108127542 + NM_000051 ATM 0 . . . 0.85 75.56 76 7.42 Yes -1 0.78 Yes 0 0 No -27 0.66 Yes 18 55.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68518434 + NM_133509 RAD51B 0 . . . 3.67 86.91 21 5.09 No 8 0.9 Yes 0 0 No -20 0.78 Yes 50 80.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68793936 + NM_004360 CDH1 0 . . . 4.4 74.15 17 4.8 No 33 1.1 Yes 0 0 No -38 0.58 No 53 67.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68980977 + NM_133509 RAD51B 0 . . . 5.28 76.32 22 5.07 No 49 0.91 Yes 0 0 No -26 0.86 Yes 44 40.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131960897 + NM_005732 RAD50 0 . . . 4.42 84.22 29 7.19 Yes 8 1.13 Yes 0 0 No -33 0.46 No 50 92.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47782482 + NM_000251 MSH2 0 . . . 6.96 81.61 34 6.27 Yes 10 0.5 No 0 0 No -33 0.74 Yes 48 58.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47680193 + NM_000251 MSH2 0 . . . 3.11 86.91 28 5.65 Yes 43 0.01 No 0 0 No -27 0.88 Yes 15 68.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29116061 - NM_001005735 CHEK2 0 . . . 0.49 0 9 4.9 No 6 0.33 No 0 0 No -19 0.42 No 32 62.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41022906 + NM_001164269 RAD51 0 . . . 4.02 80.12 31 6.08 Yes 9 1.23 Yes 0 0 No -30 0.92 Yes 49 88.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69050357 + NM_133509 RAD51B 0 . . . 0.94 0 21 7.72 Yes 67 -2.75 No 0 0 No -38 0.44 No 45 71.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68812496 + NM_133509 RAD51B 0 . . . 2.4 84.27 42 4.64 No 35 0.96 Yes 0 0 No -34 0.69 Yes 48 73.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68455298 + NM_133509 RAD51B 0 . . . 0.76 0 17 5.57 Yes 0 0.96 Yes 0 0 No -16 0.66 Yes 54 78.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37040777 + NM_000249 MLH1 0 . . . 3.04 62.9 15 4.13 No 28 0.4 No 0 0 No -38 0.79 Yes 29 61.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68685967 + NM_133509 RAD51B 0 . . . 0.68 69.9 28 5.83 Yes 52 0.48 No 0 0 No -27 0.74 Yes 47 29.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6017235 - NM_000535 PMS2 0 . . . 3.14 87.32 29 5.67 Yes 29 0.15 No 0 0 No -28 0.8 Yes 50 64.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104162410 - NM_001100119 XRCC3 0 . . . 1.92 80.65 19 4.8 No 1 0.49 No 0 0 No -23 0.64 No 13 56.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94162824 - NM_005591 MRE11 0 . . . 1.58 72.15 36 6.08 Yes 7 1.16 Yes 0 0 No -35 0.67 Yes 45 65.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29113894 - NM_001005735 CHEK2 0 . . . 2.13 83 19 6.5 Yes 15 1.44 Yes 0 0 No -18 0.78 Yes 43 94.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47683919 + NM_000251 MSH2 0 . . . 0.43 68.78 27 5.66 Yes 19 0.53 No 0 0 No -53 0.28 No 22 61.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68801467 + NM_004360 CDH1 0 . . . 4.15 80.28 28 5.14 No 72 -2.99 No 0 0 No -27 0.83 Yes 48 38.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94192723 - NM_005591 MRE11 0 . . . 3.96 79.58 19 5.61 Yes 75 0.71 No 0 0 No -18 0.63 No 41 75.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89643383 + NM_000314 PTEN 0 . . . 1.18 53.54 19 6.06 Yes 49 0.67 No 0 0 No -28 0.77 Yes 16 83.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23629190 - NM_024675 PALB2 0 . . . 4.11 69.6 39 6.52 Yes 73 -0.48 No 0 0 No -26 0.8 Yes 54 42.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37085871 + NM_000249 MLH1 0 . . . 1.08 62.53 20 6.07 Yes 2 0.79 Yes 0 0 No -19 0.74 Yes 38 50.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190742969 + NM_000534 PMS1 0 . . . 1.1 79.83 20 6.08 Yes 13 1.5 Yes 0 0 No -19 0.74 Yes 45 72.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68412962 + NM_133509 RAD51B 0 . . . 0.02 44.68 17 5.69 Yes 35 1.29 Yes 0 0 No -26 0.95 Yes 35 65.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89690690 + NM_000314 PTEN 0 . . . 0.83 67.75 22 4.31 No 46 0.72 No 0 0 No -21 0.65 No 45 72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68508921 + NM_133509 RAD51B 0 . . . 1.02 0 29 5.69 Yes 1 0.45 No 0 0 No -25 0.48 No 41 72.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47682625 + NM_000251 MSH2 0 . . . 4.26 81.41 27 5.29 No 67 0.35 No 0 0 No -26 0.79 Yes 47 53.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215641978 - NM_000465 BARD1 0 . . . 3.8 74.61 31 6.08 Yes 18 1.53 Yes 0 0 No -30 0.75 Yes 30 34.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47649004 + NM_000251 MSH2 0 . . . 7.88 71.69 24 6.85 Yes 8 1.11 Yes 0 0 No -27 0.51 No 49 87.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84389759 - NM_139076 FAM175A 0 . . . 2.16 78.59 24 6.1 Yes -2 0.23 No 0 0 No -30 0.56 No 45 81.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1221730 + NM_000455 STK11 0 . . . 2.89 77.36 27 4.75 No NA NA NA 0 0 No -26 0.44 No 51 17.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23634495 - NM_024675 PALB2 0 . . . 2.16 75.3 35 5.76 Yes 12 0.49 No 33 0.91 Yes -28 0.78 Yes 46 59.33 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 105201378 + NM_021930 RINT1 0 . . . 0.11 74.73 44 7.42 Yes 33 1.85 Yes 0 0 No -23 0.57 No 25 58.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108228444 + NM_000051 ATM 0 . . . 0.41 72.74 25 5.13 No 72 2.1 Yes 0 0 No -24 0.63 No 48 57.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68650274 + NM_133509 RAD51B 0 . . . 1.68 0 36 7.36 Yes 66 1.77 Yes 0 0 No -22 0.79 Yes 43 65.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104177677 - NM_001100119 XRCC3 0 . . . 1.02 57.61 17 5.12 No 19 -2.35 No 0 0 No -20 0.82 Yes 48 70.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1222143 + NM_000455 STK11 0 . . . 1.06 0 67 8.25 Yes 60 -4.13 No 0 0 No -61 0.28 No 59 39.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108182396 + NM_000051 ATM 0 . . . 2.39 76.63 23 5 No 67 -5.13 No 0 0 No -22 0.9 Yes 39 50.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89666392 + NM_000314 PTEN 0 . . . 0.12 65.38 13 4.9 No 68 -5.5 No 0 0 No -23 0.58 No 51 21.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45795982 - NM_001048171 MUTYH 0 . . . 0.42 0 20 4.69 No 63 0.8 Yes 0 0 No -19 0.66 Yes 47 32.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41000636 + NM_001164269 RAD51 0 . . . 0.42 74.73 20 5.01 No 33 0.7 No 0 0 No -23 0.72 Yes 20 47.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68631899 + NM_133509 RAD51B 0 . . . 9.65 86.36 12 4.24 No 36 0.94 Yes 0 0 No -24 0.75 Yes 38 47.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69107288 + NM_133509 RAD51B 0 . . . 2.08 81.51 10 5.1 No 66 0.12 No 0 0 No -27 0.88 Yes 49 84.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69135298 + NM_133509 RAD51B 0 . . . 0.73 0 38 6.29 Yes 52 -2.09 No 0 0 No -16 0.46 No 56 29.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47691805 + NM_000251 MSH2 0 . . . 0.38 65.67 16 5.61 Yes 46 0.34 No 0 0 No -23 0.48 No 45 73.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37066114 + NM_000249 MLH1 0 . . . 2.81 75.77 15 4.3 No 20 0.85 Yes 0 0 No -15 0.61 No 52 36.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68456495 + NM_133509 RAD51B 0 . . . 3.36 83.61 24 5.19 No 72 -2.67 No 0 0 No -23 0.7 Yes 44 94.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68303154 + NM_133509 RAD51B 0 . . . 5.7 81.51 31 7.28 Yes 51 0.8 Yes 0 0 No -30 0.89 Yes 36 63.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7572549 - NM_000546 TP53 0 . . . 5.67 81.96 20 5.01 No 33 1.47 Yes 0 0 No -26 0.5 No 44 97.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89673496 + NM_000314 PTEN 0 . . . 8.57 82.75 13 4.8 No 73 0.92 Yes 0 0 No -19 0.61 No 48 60.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68706157 + NM_133509 RAD51B 0 . . . 5.6 81.57 17 5.57 Yes -3 0.99 Yes 0 0 No -31 0.17 No 36 55.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89630039 + NM_000314 PTEN 0 . . . 1.79 76.84 19 5 No 32 1.18 Yes 0 0 No -18 0.38 No 49 48.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68564360 + NM_133509 RAD51B 0 . . . 1.11 79.85 12 5.9 Yes 5 0.48 No 0 0 No -22 0.47 No 53 48.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56810478 + NM_058216 RAD51C 0 . . . 3.03 69.73 24 5.2 No 16 1.08 Yes 0 0 No -23 0.87 Yes 42 87.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108126388 + NM_000051 ATM 0 . . . 5.92 82.31 18 4.9 No 58 1.44 Yes 0 0 No -58 0.55 No 39 65.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6027657 - NM_000535 PMS2 0 . . . 5.19 84.17 36 7.08 Yes 71 -0.8 No 0 0 No -42 0.42 No 13 42.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68522678 + NM_133509 RAD51B 0 . . . 0.03 0 39 7.32 Yes 75 -4.98 No 0 0 No -34 0.33 No 49 67.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071319 + NM_133509 RAD51B 0 . . . 5.96 75.97 13 4.36 No 17 1.36 Yes 0 0 No -28 0.49 No 41 90.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75517149 - NM_001040108 MLH3 0 . . . 3.53 82.48 15 4.57 No 15 0.32 No 0 0 No -20 0.43 No 43 65.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190716217 + NM_000534 PMS1 0 . . . 4.54 70.98 19 5 No 64 0.03 No 0 0 No -18 0.52 No 40 82.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75511509 - NM_001040108 MLH3 0 . . . 0.49 62.47 20 6.53 Yes 32 -4.05 No 0 0 No -24 0.67 Yes 53 18.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23644197 - NM_024675 PALB2 0 . . . 8.99 87.6 23 4.89 No 58 1.02 Yes 0 0 No -22 0.64 No 43 47.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68959455 + NM_133509 RAD51B 0 . . . 1.51 69.1 31 5.1 No 34 0.94 Yes 0 0 No -30 0.55 No 49 45.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29135765 - NM_001005735 CHEK2 0 . . . 7.66 85.35 17 4.8 No 50 0.26 No 0 0 No -19 0.68 Yes 40 77.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37036015 + NM_000249 MLH1 0 . . . 1.21 78.97 17 5.57 Yes 63 -4.16 No 0 0 No -16 0.72 Yes 46 66.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108100048 + NM_000051 ATM 0 . . . 3.77 64.57 22 4.88 No 69 -3.83 No 0 0 No -21 0.79 Yes 53 67.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47690496 + NM_000251 MSH2 0 . . . 4.34 79.22 36 5.91 Yes 11 0.1 No 0 0 No -35 0.48 No 41 34.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344510 + NM_133509 RAD51B 0 . . . 2.15 0 46 6.01 Yes 45 1.27 Yes 0 0 No -45 0.5 No 56 46.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6009031 - NM_000535 PMS2 0 . . . 8.03 77.93 24 6.29 Yes 13 1.37 Yes 0 0 No -23 0.6 No 45 48.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68912240 + NM_133509 RAD51B 0 . . . 2.28 77.8 14 4.35 No 18 0.05 No 0 0 No -16 0.21 No 46 58.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6037017 - NM_000535 PMS2 0 . . . 2.59 0 20 4.99 No 54 1.22 Yes 0 0 No -19 0.75 Yes 44 63.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48026233 + NM_000179 MSH6 0 . . . 2.31 66.86 11 3.25 No 27 0.58 No 0 0 No -10 0.24 No 31 68.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59758770 - NM_032043 BRIP1 0 . . . 4.64 73.6 24 5 No 41 -2.25 No 0 0 No -27 0.81 Yes 41 50.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32918466 + NM_000059 BRCA2 0 . . . 3.91 83.16 14 4.16 No 6 -1.27 No 0 0 No -52 0.53 No 48 76.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152347555 - NM_005431 XRCC2 0 . . . 1.16 66.1 23 7.47 Yes 75 -6.78 No 0 0 No -26 0.62 No 54 34.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59931669 - NM_032043 BRIP1 0 . . . 0.83 71.94 21 5 No 17 0.47 No 0 0 No -20 0.74 Yes 41 96.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37037094 + NM_000249 MLH1 0 . . . 6.24 82.31 16 4.69 No 58 1.21 Yes 0 0 No -18 0.36 No 55 58.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68633121 + NM_133509 RAD51B 0 . . . 6.19 81.54 12 4.8 No 66 1.05 Yes 0 0 No -42 0.4 No 52 78.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47694928 + NM_000251 MSH2 0 . . . 2.42 71.81 18 4.6 No 36 1.91 Yes 0 0 No -25 0.79 Yes 44 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68436151 + NM_133509 RAD51B 0 . . . 0.81 73.78 16 4.98 No 64 2.05 Yes 0 0 No -21 0.64 No 21 43.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37044188 + NM_000249 MLH1 0 . . . 2.59 68.46 28 5.25 No 61 0.4 No 0 0 No -27 0.89 Yes 39 54.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59823597 - NM_032043 BRIP1 0 . . . 2.31 68.95 22 5.2 No 64 1.59 Yes 0 0 No -21 0.6 No 53 33.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47657971 + NM_000251 MSH2 0 . . . 8.23 75.66 39 4.16 No 31 0.56 No 0 0 No -32 0.66 No 14 51.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59765535 - NM_032043 BRIP1 0 . . . 7.19 84.45 24 4.25 No 9 2.16 Yes 0 0 No -23 0.97 Yes 42 59.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68807112 + NM_133509 RAD51B 0 . . . 1.61 0 20 5.5 No 38 0.49 No 0 0 No -19 0.31 No 28 63.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29101696 - NM_001005735 CHEK2 0 . . . 5.67 82.31 16 4.69 No 58 1.01 Yes 0 0 No -30 0.52 No 52 69.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47658339 + NM_000251 MSH2 0 . . . 1.14 66.32 36 7 Yes 74 -5.56 No 0 0 No -35 0.49 No 44 50.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47663777 + NM_000251 MSH2 0 . . . 7.09 81.59 34 6.68 Yes 59 -3.63 No 0 0 No -28 0.28 No 45 75.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37086346 + NM_000249 MLH1 0 . . . 8.43 90.76 27 4.97 No 71 -1.03 No 0 0 No -26 0.9 Yes 38 69.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32969015 + NM_000059 BRCA2 0 . . . 9.09 77.44 14 4.36 No 26 0.81 Yes 0 0 No -22 0.34 No 46 67.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94157052 - NM_005591 MRE11 0 . . . 9.9 84.04 30 4.24 No -1 0.61 No 0 0 No -22 0.61 No 42 45.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89687061 + NM_000314 PTEN 0 . . . 0.37 0 30 5.69 Yes 30 1.18 Yes 0 0 No -29 0.94 Yes 56 43.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23651249 - NM_024675 PALB2 0 . . . 1.38 76.36 42 5.85 Yes 70 -4.87 No 0 0 No -48 0.59 No 50 22.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47748072 + NM_000251 MSH2 0 . . . 0.21 74.34 24 4.06 No NA NA NA 0 0 No -27 0.52 No 51 48.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94227139 - NM_005591 MRE11 0 . . . 0.59 0 17 4.43 No 48 0.79 Yes 0 0 No -17 0.69 Yes 40 85.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108118507 + NM_000051 ATM 0 . . . 3.3 86.29 17 4.69 No 7 1.08 Yes 0 0 No -22 0.49 No 51 86.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68601218 + NM_133509 RAD51B 0 . . . 4.06 70.87 23 4.69 No 1 0.72 No 0 0 No -22 0.4 No 51 75.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59775743 - NM_032043 BRIP1 0 . . . 1.01 59.8 36 6.15 Yes 22 -0.84 No 0 0 No -31 0.87 Yes 14 60.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68785641 + NM_004360 CDH1 0 . . . 6.13 82 25 4.89 No 58 1.16 Yes 0 0 No -24 0.8 Yes 54 64.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68533881 + NM_133509 RAD51B 0 . . . 3.94 76.54 50 10.1 Yes 21 0.17 No 0 0 No -50 0.5 No 42 45.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29098873 - NM_001005735 CHEK2 0 . . . 6.39 75.08 40 6.48 Yes 35 0.18 No 0 0 No -39 0.49 No 47 92.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69072803 + NM_133509 RAD51B 0 . . . 5.34 75.62 14 5.99 Yes 1 1.1 Yes 0 0 No -19 0.54 No 44 71.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47703455 + NM_000251 MSH2 0 . . . 0.27 66.45 25 5.47 No 4 1.28 Yes 0 0 No -44 0.66 Yes 54 69.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37073672 + NM_000249 MLH1 0 . . . 0.19 0 43 6.61 Yes 43 -3.48 No 0 0 No -42 0.54 No 51 55.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190654718 + NM_000534 PMS1 0 . . . 3.67 75.26 15 5.39 No 41 -1.54 No 0 0 No -28 0.52 No 37 73.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90980613 - NM_002485 NBN 0 . . . 6.53 89.65 21 4.66 No 52 -2.43 No 0 0 No -18 0.34 No 48 64.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75479212 - NM_001040108 MLH3 0 . . . 5.84 84.62 36 11.08 Yes 31 0.75 No 0 0 No -35 0.87 Yes 48 71.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59928709 - NM_032043 BRIP1 0 . . . 3.93 72.51 19 4.58 No 45 0.05 No 0 0 No -18 0.86 Yes 44 85.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59818424 - NM_032043 BRIP1 0 . . . 0.26 58.19 15 5.37 No 52 -4.47 No 0 0 No -51 0.56 No 52 32.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69048335 + NM_133509 RAD51B 0 . . . 6.01 83.45 31 6 Yes 6 0.19 No 0 0 No -31 0.36 No 40 87.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69076087 + NM_133509 RAD51B 0 . . . 11.27 88.35 18 3.96 No 76 1.11 Yes 0 0 No -23 0.92 Yes 49 73.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68541268 + NM_133509 RAD51B 0 . . . 4.88 83.1 14 4.47 No 28 0.98 Yes 0 0 No -23 0.69 Yes 45 80.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32934758 + NM_000059 BRCA2 0 . . . 3.24 68.34 18 5.38 No 21 1.74 Yes 0 0 No -24 0.58 No 37 60.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105196074 + NM_021930 RINT1 0 . . . 4.39 65.46 17 4.77 No 76 -6.66 No 0 0 No -19 0.64 No 39 74.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68928121 + NM_133509 RAD51B 0 . . . 5 80.31 36 6.89 Yes 31 0.18 No 0 0 No -35 0.69 Yes 51 77.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84380398 - NM_139076 FAM175A 0 . . . 3.31 71.72 23 4.78 No 69 0.42 No 0 0 No -22 0.41 No 41 67.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37050016 + NM_000249 MLH1 0 . . . 5.9 83.31 15 5.39 No 10 0.9 Yes 0 0 No -27 0.56 No 48 68.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90959313 - NM_002485 NBN 0 . . . 8.03 82.65 31 5.81 Yes 9 0.95 Yes 0 0 No -30 0.89 Yes 49 46.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75485763 - NM_001040108 MLH3 0 . . . 6.64 91.22 50 6.52 Yes 10 0.09 No 0 0 No -39 0.51 No 48 86.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59848478 - NM_032043 BRIP1 0 . . . 2.01 0 24 5.29 No 12 1.17 Yes 0 0 No -21 0.8 Yes 36 81.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94207338 - NM_005591 MRE11 0 . . . 2.73 78.47 35 3.67 No 29 1.01 Yes 0 0 No -30 0.87 Yes 43 54.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68526641 + NM_133509 RAD51B 0 . . . 1.77 0 23 4.9 No 62 0.26 No 0 0 No -22 0.74 Yes 36 60.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68696890 + NM_133509 RAD51B 0 . . . 6.59 86.84 15 4.58 No 2 1.1 Yes 0 0 No -46 0.72 Yes 47 86.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68486765 + NM_133509 RAD51B 0 . . . 9.08 88.58 29 5.29 No 11 0.5 No 0 0 No -26 0.23 No 47 90.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68753215 + NM_133509 RAD51B 0 . . . 3.01 65.72 17 5.05 No 24 1.79 Yes 0 0 No -20 0.67 Yes 34 93.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89641146 + NM_000314 PTEN 0 . . . 4.85 77.51 26 5.49 No 24 1.93 Yes 0 0 No -25 0.62 No 34 79.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190724423 + NM_000534 PMS1 0 . . . 2.71 0 33 6.08 Yes 31 0.99 Yes 0 0 No -32 0.41 No 44 69.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68309140 + NM_133509 RAD51B 0 . . . 3.76 76.63 29 6.47 Yes 2 1.51 Yes 0 0 No -28 0.89 Yes 18 62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59857797 - NM_032043 BRIP1 0 . . . 1.26 0 25 5.39 No 15 0.72 No 22 0.76 Yes -24 0.48 No 43 37.26 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 215588478 - NM_000465 BARD1 0 . . . 7.46 77.59 23 4.69 No 2 0.79 Yes 0 0 No -50 0.59 No 45 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47648527 + NM_000251 MSH2 0 . . . 1.88 84.22 34 5.78 Yes 33 0.98 Yes 0 0 No -28 0.74 Yes 50 55.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68565034 + NM_133509 RAD51B 0 . . . 2.89 0 12 4.24 No 48 2.11 Yes 0 0 No -37 0.44 No 49 64.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68322310 + NM_133509 RAD51B 0 . . . 4.84 79.51 17 4.8 No 26 -3.75 No 0 0 No -54 0.3 No 47 44.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68530542 + NM_133509 RAD51B 0 . . . 6.05 73.41 23 4.67 No 70 -1.77 No 0 0 No -20 0.48 No 43 71.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37047108 + NM_000249 MLH1 0 . . . 2.48 74.85 27 5.68 Yes 0 1.01 Yes 0 0 No -22 0.47 No 52 67.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108192704 + NM_000051 ATM 0 . . . 3.99 66.72 40 7.01 Yes 10 1 Yes 0 0 No -29 0.29 No 27 80.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68880008 + NM_133509 RAD51B 0 . . . 3.93 75.31 18 4.66 No 28 0.48 No 0 0 No -39 0.48 No 30 68.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68455770 + NM_133509 RAD51B 0 . . . 3.25 68.71 14 4.87 No 66 -6.02 No 0 0 No -18 0.38 No 43 40.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68769533 + NM_004360 CDH1 0 . . . 2.14 82.65 16 5.2 No 57 -4.25 No 0 0 No -29 0.85 Yes 49 84.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68889652 + NM_133509 RAD51B 0 . . . 3.48 62.36 27 5.2 No 75 2.15 Yes 0 0 No -26 0.47 No 42 77.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68726269 + NM_133509 RAD51B 0 . . . 1.29 64.69 16 5.25 No 26 0.09 No 0 0 No -16 0.35 No 45 43.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37033082 + NM_000249 MLH1 0 . . . 0.94 0 10 4 No 32 0.8 Yes 0 0 No -32 0.53 No 48 83.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1204855 + NM_000455 STK11 0 . . . 3.34 66.46 24 4.8 No 16 1.47 Yes 0 0 No -23 0.73 Yes 42 96.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68521395 + NM_133509 RAD51B 0 . . . 0.55 0 13 4.24 No 11 0.43 No 0 0 No -19 0.73 Yes 47 72.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68482630 + NM_133509 RAD51B 0 . . . 2.33 0 31 5.27 No 49 1.9 Yes 0 0 No -28 0.44 No 22 70.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33425691 - NM_002878 RAD51D 0 . . . 0.09 74.68 17 4.58 No 4 0.41 No 0 0 No -36 0.26 No 54 80.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84400769 - NM_139076 FAM175A 0 . . . 2.62 71.73 25 5.64 Yes 7 0.59 No 0 0 No -24 0.84 Yes 48 53.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131928562 + NM_005732 RAD50 0 . . . 8.72 83.61 31 6.08 Yes 67 0.76 No 0 0 No -30 0.93 Yes 42 88.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21990783 - NM_000077 CDKN2A 0 . . . 2.1 60.61 22 3.73 No 72 -5.64 No 0 0 No -25 0.37 No 38 36.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45802621 - NM_001048171 MUTYH 0 . . . 8.15 78.44 18 5.29 No 35 0.26 No 0 0 No -26 0.46 No 34 32.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68724961 + NM_133509 RAD51B 0 . . . 3.12 65.94 18 4.51 No 9 0.18 No 0 0 No -17 0.29 No 49 70.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69027772 + NM_133509 RAD51B 0 . . . 4.57 75.62 16 3.31 No 72 -1.85 No 0 0 No -19 0.76 Yes 51 50.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68807465 + NM_004360 CDH1 0 . . . 4.03 68.59 47 5.31 No 23 1.57 Yes 0 0 No -21 0.83 Yes 40 66.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69095467 + NM_133509 RAD51B 0 . . . 1.04 65.85 16 4.66 No 69 -1.9 No 0 0 No -43 0.51 No 32 72.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59828264 - NM_032043 BRIP1 0 . . . 2.76 85.55 12 4.9 No 36 1.06 Yes 0 0 No -11 0.33 No 22 33.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152343508 - NM_005431 XRCC2 0 . . . 2.45 73.56 15 5.1 No 61 -1.77 No 0 0 No -14 0.53 No 48 71.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40992302 + NM_001164269 RAD51 0 . . . 1.86 65.83 20 5.1 No 32 0.33 No 0 0 No -32 0.78 Yes 41 85.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131972502 + NM_005732 RAD50 0 . . . 2.82 78.59 23 5.45 No 71 0.35 No 0 0 No -22 0.76 Yes 50 57.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68472727 + NM_133509 RAD51B 0 . . . 5.07 80.14 36 5.9 Yes 39 -4.35 No 0 0 No -26 0.52 No 52 66.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190731402 + NM_000534 PMS1 0 . . . 4.91 75.96 15 5.51 No 17 1.14 Yes 0 0 No -19 0.79 Yes 41 67.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94174211 - NM_005591 MRE11 0 . . . 1.3 0 33 5.74 Yes 63 -3.23 No 0 0 No -28 0.43 No 44 61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68738309 + NM_133509 RAD51B 0 . . . 4.26 71.16 21 5.52 No 72 -3.37 No 0 0 No -20 0.82 Yes 38 80.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47734675 + NM_000251 MSH2 0 . . . 3.88 76.09 46 7.72 Yes 69 -1.56 No 0 0 No -28 0.6 No 45 83.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32953382 + NM_000059 BRCA2 0 . . . 5.16 76.5 35 6.54 Yes 15 1.18 Yes 0 0 No -16 0.51 No 43 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68808623 + NM_004360 CDH1 0 . . . 0.71 63.28 15 5.38 No 70 -4.88 No 0 0 No -20 0.33 No 46 83.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69133546 + NM_133509 RAD51B 0 . . . 2.56 0 15 4.99 No 22 0.99 Yes 0 0 No -18 0.87 Yes 36 56.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21989574 - NM_000077 CDKN2A 0 . . . 0.5 0 25 5.65 Yes 51 -4.64 No 0 0 No -24 0.89 Yes 43 42.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6043915 - NM_000535 PMS2 0 . . . 0.73 0 26 4.69 No 41 0.36 No 0 0 No -25 0.74 Yes 17 82.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68592487 + NM_133509 RAD51B 0 . . . 7.99 82.57 60 8.12 Yes 41 0.67 No 0 0 No -30 0.6 No 32 93.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48023644 + NM_000179 MSH6 0 . . . 2.23 65.45 19 5.38 No 23 0.21 No 0 0 No -22 0.73 Yes 40 70.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68690353 + NM_133509 RAD51B 0 . . . 5.82 76.65 36 6.16 Yes 16 0.74 No 0 0 No -35 0.54 No 42 88.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75491638 - NM_001040108 MLH3 0 . . . 1.54 76.34 32 5.85 Yes 57 -1.22 No 0 0 No -34 0.37 No 30 63.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68685216 + NM_133509 RAD51B 0 . . . 1.64 66.46 23 5.39 No 64 1.07 Yes 0 0 No -22 0.62 No 47 41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68482135 + NM_133509 RAD51B 0 . . . 0.36 71.22 37 6.45 Yes 3 0.01 No 0 0 No -32 0.53 No 41 48.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131919110 + NM_005732 RAD50 0 . . . 5.36 77.53 14 5.1 No 71 1.18 Yes 0 0 No -44 0.3 No 47 48.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37035304 + NM_000249 MLH1 0 . . . 3.64 71.45 29 5.33 No -3 1.39 Yes 21 0.88 Yes -28 0.9 Yes 36 21.05 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 215622422 - NM_000465 BARD1 0 . . . 2.9 78.79 34 6.85 Yes 47 0.07 No 0 0 No -33 0.84 Yes 42 55.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59923353 - NM_032043 BRIP1 0 . . . 0.86 71.19 22 5.1 No 30 1.19 Yes 0 0 No -21 0.81 Yes 28 77.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90994842 - NM_002485 NBN 0 . . . 5.21 84.03 29 7.26 Yes 9 0.24 No 0 0 No -39 0.32 No 49 93.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6032697 - NM_000535 PMS2 0 . . . 5.62 66.28 26 6.52 Yes 28 0.77 No 0 0 No -25 0.47 No 43 86.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68697558 + NM_133509 RAD51B 0 . . . 3.22 77.54 15 4.56 No 67 0.32 No 0 0 No -21 0.87 Yes 43 68.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32889257 + NM_000059 BRCA2 0 . . . 3.83 75.08 31 5.74 Yes 22 1.13 Yes 0 0 No -30 0.92 Yes 48 42.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56795354 + NM_058216 RAD51C 0 . . . 9.72 91.32 15 5.66 Yes 40 -3.39 No 0 0 No -26 0.78 Yes 51 53.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68851291 + NM_004360 CDH1 0 . . . 0.92 51.03 27 9.59 Yes 1 -2.33 No 0 0 No -26 0.81 Yes 43 46.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59942467 - NM_032043 BRIP1 0 . . . 6.95 89.36 47 5.22 No 30 0.59 No 0 0 No -23 0.5 No 18 94.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190672806 + NM_000534 PMS1 0 . . . 1.43 0 13 5.1 No 11 0.85 Yes 0 0 No -28 0.63 No 47 83.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1204248 + NM_000455 STK11 0 . . . 0.22 80.32 17 4.72 No 35 1.69 Yes 0 0 No -25 0.28 No 23 71.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56781554 + NM_058216 RAD51C 0 . . . 3.97 69.43 19 4.69 No -1 0.36 No 0 0 No -18 0.88 Yes 45 75.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7565035 - NM_000546 TP53 0 . . . 1.91 74.68 28 5.38 No 62 0.21 No 0 0 No -27 0.57 No 35 51.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108130972 + NM_000051 ATM 0 . . . 0.42 74.73 17 3.98 No 33 1.17 Yes 0 0 No -20 0.6 No 17 43.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108166098 + NM_000051 ATM 0 . . . 4.63 76.63 15 5.83 Yes 2 1.51 Yes 0 0 No -27 0.22 No 48 58.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90986026 - NM_002485 NBN 0 . . . 2.45 69.65 17 4.77 No 60 0.3 No 0 0 No -37 0.85 Yes 49 70.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59898065 - NM_032043 BRIP1 0 . . . 4.99 70.83 27 3.75 No 23 1.62 Yes 0 0 No -26 0.72 Yes 45 71.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32943208 + NM_000059 BRCA2 0 . . . 3.13 68.34 44 7.07 Yes 21 1.7 Yes 0 0 No -43 0.48 No 37 76.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215669980 - NM_000465 BARD1 0 . . . 3.9 80.69 26 5.29 No 75 1.05 Yes 0 0 No -25 0.42 No 45 47.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47795330 + NM_000251 MSH2 0 . . . 2.14 0 18 4.05 No 72 -6.02 No 0 0 No -18 0.63 No 40 62.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152371644 - NM_005431 XRCC2 0 . . . 1.43 75.62 14 5.09 No 35 0.2 No 0 0 No -57 0.61 No 49 46.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41014188 + NM_001164269 RAD51 0 . . . 0.26 0 23 4.9 No 11 0.18 No 0 0 No -20 0.82 Yes 35 48.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68876817 + NM_133509 RAD51B 0 . . . 7.95 88.49 25 5.1 No 48 1.48 Yes 0 0 No -24 0.72 Yes 41 64.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94206431 - NM_005591 MRE11 0 . . . 4.22 81.96 30 5.22 No 8 0.11 No 0 0 No -29 0.65 No 39 75.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32943755 + NM_000059 BRCA2 0 . . . 5.97 88.21 28 4.74 No 35 0.25 No 0 0 No -23 0.45 No 17 58.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344406 + NM_133509 RAD51B 0 . . . 0.57 55.41 15 4.46 No 73 0.53 No 0 0 No -49 0.32 No 48 67.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190701568 + NM_000534 PMS1 0 . . . 5.78 83.82 19 4.93 No -1 0.35 No 0 0 No -18 0.51 No 50 66.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41021451 + NM_001164269 RAD51 0 . . . 0.36 61.05 18 4.69 No 57 1.25 Yes 0 0 No -20 0.41 No 42 57.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29103528 - NM_001005735 CHEK2 0 . . . 4.01 76.93 25 4.27 No 21 0.8 Yes 0 0 No -24 0.91 Yes 37 77.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68455550 + NM_133509 RAD51B 0 . . . 1.94 69.5 17 5.29 No 57 0.78 Yes 0 0 No -32 0.4 No 47 57.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56797134 + NM_058216 RAD51C 0 . . . 2.71 84.79 24 7.09 Yes 2 1.51 Yes 0 0 No -24 0.46 No 25 78.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37085715 + NM_000249 MLH1 0 . . . 5.12 85.02 30 5.99 Yes 6 1.26 Yes 0 0 No -29 0.77 Yes 52 85.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47755224 + NM_000251 MSH2 0 . . . 4.87 71.28 19 4.44 No 58 -1.35 No 0 0 No -18 0.68 Yes 55 87.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94188974 - NM_005591 MRE11 0 . . . 4.34 89.09 24 6.07 Yes 6 0.55 No 0 0 No -23 0.62 No 46 88.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68962515 + NM_133509 RAD51B 0 . . . 5.06 81.05 31 7.53 Yes 7 1.16 Yes 0 0 No -30 0.84 Yes 51 64.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131911669 + NM_005732 RAD50 0 . . . 4.71 0 20 5.57 Yes 4 0.46 No 0 0 No -19 0.82 Yes 31 54.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32894284 + NM_000059 BRCA2 0 . . . 4.73 80.44 21 5.74 Yes 60 -3.98 No 0 0 No -20 0.87 Yes 39 77.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90993801 - NM_002485 NBN 0 . . . 0.69 77.24 25 5.47 No 62 1 Yes 0 0 No -24 0.93 Yes 34 83.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215630586 - NM_000465 BARD1 0 . . . 0.33 0 22 5 No 59 0.63 No 0 0 No -21 0.63 No 46 52.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94167363 - NM_005591 MRE11 0 . . . 0.06 63.4 20 5.57 Yes 24 -3.28 No 0 0 No -19 0.69 Yes 31 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152374739 - NM_005431 XRCC2 0 . . . 3.96 72.73 28 5.38 No 53 0.49 No 0 0 No -27 0.87 Yes 44 50.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69120995 + NM_133509 RAD51B 0 . . . 1.36 74.56 46 7.15 Yes 54 -4.84 No 0 0 No -29 0.65 No 37 59.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105191594 + NM_021930 RINT1 0 . . . 1.54 81.72 24 4.76 No 76 1.21 Yes 0 0 No -23 0.82 Yes 50 88.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152357432 - NM_005431 XRCC2 0 . . . 4.47 89.61 41 6.52 Yes 64 0.5 No 0 0 No -25 0.47 No 47 82.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131964712 + NM_005732 RAD50 0 . . . 1.94 81.88 20 4.36 No 4 0.2 No 0 0 No -20 0.71 Yes 47 49.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68380881 + NM_133509 RAD51B 0 . . . 4.47 85.02 16 4.12 No 4 1.2 Yes 0 0 No -30 0.66 No 43 58.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41231709 - NM_007294 BRCA1 0 . . . 1.02 72.86 22 5.1 No 38 0.78 Yes 0 0 No -21 0.57 No 42 95.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47730969 + NM_000251 MSH2 0 . . . 8.81 84.47 22 5.1 No 71 2.52 Yes 0 0 No -21 0.84 Yes 36 68.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75478845 - NM_001040108 MLH3 0 . . . 6.02 0 32 6.15 Yes 22 0.65 No 0 0 No -31 0.71 Yes 36 68.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41231260 - NM_007294 BRCA1 0 . . . 0.73 74.97 36 7.45 Yes 0 1.1 Yes 0 0 No -35 0.66 No 51 38.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90974282 - NM_002485 NBN 0 . . . 2.48 71.87 19 5.01 No 42 -2.98 No 0 0 No -30 0.7 Yes 44 54.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33429307 - NM_002878 RAD51D 0 . . . 1.02 76.71 38 6.73 Yes 74 -2.3 No 0 0 No -37 0.36 No 45 24.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40987972 + NM_001164269 RAD51 0 . . . 4 65.46 53 5.91 Yes 16 1.49 Yes 0 0 No -20 0.6 No 42 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68930968 + NM_133509 RAD51B 0 . . . 3.6 65.26 46 6.37 Yes 44 1.28 Yes 0 0 No -35 0.37 No 48 71.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6013585 - NM_000535 PMS2 0 . . . 3.95 84.16 22 5.19 No 15 -1.47 No 0 0 No -21 0.51 No 52 46.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849296 - NM_032043 BRIP1 0 . . . 3.67 84 31 4.09 No 2 1.5 Yes 0 0 No -30 0.64 No 19 61.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190648557 + NM_000534 PMS1 0 . . . 0.47 77.62 26 4.99 No 19 1.09 Yes 0 0 No -18 0.4 No 50 67.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69008862 + NM_133509 RAD51B 0 . . . 2.44 67.22 15 4.58 No 72 0.46 No 0 0 No -62 0.41 No 46 46.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68380825 + NM_133509 RAD51B 0 . . . 2.08 0 35 6.39 Yes 40 1.23 Yes 0 0 No -34 0.46 No 18 50.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90978510 - NM_002485 NBN 0 . . . 2.2 77.75 38 6.08 Yes 33 0.82 Yes 0 0 No -37 0.66 Yes 32 63.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7571455 - NM_000546 TP53 0 . . . 12.02 82.42 21 4.67 No 61 0.55 No 0 0 No -20 0.91 Yes 41 77.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68736160 + NM_133509 RAD51B 0 . . . 8.55 88.76 15 5.65 Yes 64 2.05 Yes 0 0 No -27 0.35 No 47 58.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190704756 + NM_000534 PMS1 0 . . . 3.29 74.19 31 6.55 Yes -1 0.49 No 0 0 No -30 0.53 No 44 91.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104179145 - NM_001100119 XRCC3 0 . . . 3.71 75.16 16 5.1 No 52 0.9 Yes 0 0 No -27 0.32 No 21 44.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56804202 + NM_058216 RAD51C 0 . . . 2.91 83.28 28 5.39 No 17 1.21 Yes 0 0 No -28 0.39 No 41 74.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68803789 + NM_004360 CDH1 0 . . . 2.2 72.26 16 4.69 No 31 1.21 Yes 0 0 No -22 0.42 No 27 67.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68498096 + NM_133509 RAD51B 0 . . . 1.18 70.37 27 4.27 No 48 0.72 No 0 0 No -20 0.86 Yes 13 40.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68783173 + NM_133509 RAD51B 0 . . . 6.52 84.95 28 6.4 Yes 6 0.03 No 0 0 No -27 0.88 Yes 47 63.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32973279 + NM_000059 BRCA2 0 . . . 1.72 73.44 22 7.03 Yes 71 -4.29 No 0 0 No -26 0.54 No 44 42.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68789292 + NM_004360 CDH1 0 . . . 0.29 0 16 4.69 No 31 0.15 No 0 0 No -15 0.26 No 44 64.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68993031 + NM_133509 RAD51B 0 . . . 3.03 79.21 11 5.29 No -1 0.85 Yes 0 0 No -27 0.6 No 37 41.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68851117 + NM_133509 RAD51B 0 . . . 4.29 67.98 37 6.08 Yes 68 -5.19 No 0 0 No -36 0.68 Yes 36 66.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69028682 + NM_133509 RAD51B 0 . . . 2.28 75.82 32 5.63 Yes 34 -3.21 No 0 0 No -24 0.92 Yes 51 94.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94228851 - NM_005591 MRE11 0 . . . 2.45 77.51 28 4.91 No 5 1.5 Yes 0 0 No -20 0.25 No 44 62.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89655001 + NM_000314 PTEN 0 . . . 0.81 66.07 26 4.19 No 54 0.19 No 0 0 No -25 0.71 Yes 39 46.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32949960 + NM_000059 BRCA2 0 . . . 2.89 68.34 23 7.55 Yes 13 0.83 Yes 0 0 No -22 0.89 Yes 45 83.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68822231 + NM_004360 CDH1 0 . . . 0.52 66.14 50 8.43 Yes 56 0.99 Yes 0 0 No -49 0.5 No 42 71.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104178645 - NM_001100119 XRCC3 0 . . . 3.35 79.55 16 5.04 No 46 0.59 No 0 0 No -20 0.68 Yes 52 67.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47690219 + NM_000251 MSH2 0 . . . 5.01 73.54 49 6.41 Yes 14 0.55 No 0 0 No -23 0.92 Yes 44 39.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56788744 + NM_058216 RAD51C 0 . . . 3.19 76.63 46 7.52 Yes 40 -4.16 No 0 0 No -25 0.67 Yes 42 41.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68387316 + NM_133509 RAD51B 0 . . . 5.7 80.88 28 5.39 No 10 0.52 No 0 0 No -27 0.69 Yes 43 71.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68859203 + NM_133509 RAD51B 0 . . . 7.14 81.61 42 7.47 Yes 64 1.98 Yes 0 0 No -41 0.61 No 45 72.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68474778 + NM_133509 RAD51B 0 . . . 4.14 78.42 14 5.1 No 1 0.26 No 0 0 No -25 0.27 No 38 79.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190716550 + NM_000534 PMS1 0 . . . 0.09 54.25 25 5.1 No 25 0.33 No 0 0 No -24 0.93 Yes 54 34.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89625257 + NM_000314 PTEN 0 . . . 10.33 81.36 21 5.1 No -1 1.97 Yes 0 0 No -45 0.46 No 41 76.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68840234 + NM_004360 CDH1 0 . . . 3.6 85.02 19 4.58 No 58 1.7 Yes 0 0 No -21 0.35 No 54 77.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68463746 + NM_133509 RAD51B 0 . . . 5.22 67.86 14 6.08 Yes 44 0.37 No 0 0 No -20 0.35 No 15 32.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68929632 + NM_133509 RAD51B 0 . . . 4.65 84.28 18 5.74 Yes 0 1.15 Yes 0 0 No -26 0.78 Yes 52 46.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59806539 - NM_032043 BRIP1 0 . . . 0.85 81.72 17 4.69 No 33 1.17 Yes 0 0 No -20 0.58 No 50 57.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68542593 + NM_133509 RAD51B 0 . . . 3.21 0 19 5 No NA NA NA 0 0 No -22 0.49 No 38 49.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48006250 + NM_000179 MSH6 0 . . . 4.68 72.57 19 4.69 No 6 -2.51 No 0 0 No -24 0.4 No 47 35.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642756 - NM_000465 BARD1 0 . . . 4.13 85.02 29 5.42 No 15 0.19 No 0 0 No -28 0.66 Yes 43 84.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59792927 - NM_032043 BRIP1 0 . . . 2.67 70.28 26 5.67 Yes 7 0.19 No 0 0 No -29 0.51 No 37 46.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131937172 + NM_005732 RAD50 0 . . . 4.03 72.02 21 5.06 No 33 0.13 No 0 0 No -28 0.75 Yes 45 83.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108204368 + NM_000051 ATM 0 . . . 6.03 86.53 24 5.21 No 66 0.34 No 0 0 No -23 0.54 No 47 45.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152350056 - NM_005431 XRCC2 0 . . . 1.76 81.23 19 5.48 No 50 -3.85 No 0 0 No -18 0.78 Yes 44 59.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52434526 - NM_004656 BAP1 0 . . . 0.19 71.81 13 5.21 No 36 1.64 Yes 0 0 No -26 0.51 No 60 49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94197084 - NM_005591 MRE11 0 . . . 2.66 74.1 19 4.79 No 46 0.91 Yes 0 0 No -50 0.89 Yes 41 80.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131943736 + NM_005732 RAD50 0 . . . 6.19 70.16 20 4.4 No 49 0.46 No 0 0 No -20 0.61 No 41 41.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75505692 - NM_001040108 MLH3 0 . . . 1.68 78.6 25 4.86 No 62 1.21 Yes 0 0 No -22 0.83 Yes 36 61.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108125497 + NM_000051 ATM 0 . . . 1.52 83.64 18 4.35 No 32 1.18 Yes 0 0 No -17 0.8 Yes 50 37.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32906046 + NM_000059 BRCA2 0 . . . 6.15 82.8 24 5.72 Yes 63 0.37 No 0 0 No -21 0.85 Yes 46 44.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68494504 + NM_133509 RAD51B 0 . . . 5.31 71.62 15 4.58 No 69 0.55 No 0 0 No -32 0.46 No 44 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68972011 + NM_133509 RAD51B 0 . . . 3.33 69.16 21 6.87 Yes 46 1.16 Yes 0 0 No -23 0.67 Yes 43 86.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68611035 + NM_133509 RAD51B 0 . . . 6.46 70.57 16 4.58 No 50 1.2 Yes 0 0 No -40 0.67 Yes 47 87.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41279276 - NM_007294 BRCA1 0 . . . 2.96 80.23 18 4.9 No 37 -2.19 No 0 0 No -41 0.55 No 51 32.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68520030 + NM_133509 RAD51B 0 . . . 2.98 66.76 10 4.9 No 43 0.3 No 0 0 No -22 0.76 Yes 48 34.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108180667 + NM_000051 ATM 0 . . . 5.88 0 59 8.06 Yes 43 0.15 No 0 0 No -58 0.89 Yes 53 47.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108094079 + NM_000051 ATM 0 . . . 4.54 63.32 42 7.84 Yes 39 2.03 Yes 0 0 No -37 0.72 Yes 35 95.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215650511 - NM_000465 BARD1 0 . . . 8.06 85.55 35 7.2 Yes 8 0.76 No 0 0 No -34 0.67 Yes 47 57.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108183528 + NM_000051 ATM 0 . . . 1.07 0 44 6.67 Yes 62 0.4 No 0 0 No -25 0.87 Yes 38 60.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41005171 + NM_001164269 RAD51 0 . . . 6.14 88.68 28 6.12 Yes 64 -0.58 No 0 0 No -27 0.59 No 39 93.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41236508 - NM_007294 BRCA1 0 . . . 4.87 73.96 26 5.32 No 55 0.44 No 0 0 No -25 0.63 No 46 72.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47673554 + NM_000251 MSH2 0 . . . 4.28 69.19 30 7.14 Yes 14 -3.03 No 0 0 No -29 0.73 Yes 46 54.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37076877 + NM_000249 MLH1 0 . . . 6.14 75.29 29 5.28 No 58 1.23 Yes 0 0 No -28 0.48 No 47 76.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59835685 - NM_032043 BRIP1 0 . . . 0.78 0 27 6.16 Yes 66 0.64 No 0 0 No -25 0.28 No 40 48.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68899105 + NM_133509 RAD51B 0 . . . 0.37 60.82 40 5.93 Yes 66 1.03 Yes 0 0 No -39 0.55 No 36 62.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21979269 - NM_000077 CDKN2A 0 . . . 5.37 73.13 37 6.52 Yes 28 0.22 No 0 0 No -25 0.75 Yes 30 65.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68843152 + NM_004360 CDH1 0 . . . 4.54 0 36 5.92 Yes 28 -1.15 No 0 0 No -31 0.68 Yes 40 47.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68834300 + NM_133509 RAD51B 0 . . . 1.14 82.37 26 3.9 No 72 -4.35 No 0 0 No -25 0.76 Yes 49 53.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29138203 - NM_001005735 CHEK2 0 . . . 0.16 0 13 5.74 Yes 70 -2.43 No 0 0 No -26 0.44 No 47 16.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69008170 + NM_133509 RAD51B 0 . . . 3.76 81.34 24 5 No 33 0.8 Yes 0 0 No -38 0.92 Yes 51 39.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56791921 + NM_058216 RAD51C 0 . . . 2.51 70.78 26 5.29 No 16 1.05 Yes 0 0 No -25 0.85 Yes 42 90.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68612778 + NM_133509 RAD51B 0 . . . 1.89 73.98 33 7.06 Yes 69 -4.11 No 0 0 No -32 0.72 Yes 56 36.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68782502 + NM_133509 RAD51B 0 . . . 3.42 70.85 13 5 No 21 1.71 Yes 0 0 No -26 0.67 Yes 37 72.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68767873 + NM_133509 RAD51B 0 . . . 6.98 81.6 18 4.68 No 8 1.01 Yes 0 0 No -36 0.56 No 40 70.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59771421 - NM_032043 BRIP1 0 . . . 5.19 79.43 40 6.61 Yes 7 0.88 Yes 0 0 No -30 0.63 No 30 41.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7563168 - NM_000546 TP53 0 . . . 0.38 76.63 15 4.58 No 67 -4.72 No 0 0 No -31 0.6 No 43 57.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47663612 + NM_000251 MSH2 0 . . . 4.17 71.79 47 7.37 Yes 9 1.43 Yes 0 0 No -24 0.53 No 43 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131970076 + NM_005732 RAD50 0 . . . 8.81 80.07 23 5.39 No 39 0.38 No 0 0 No -22 0.9 Yes 40 61.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59792700 - NM_032043 BRIP1 0 . . . 0.83 0 13 4.99 No 35 0.81 Yes 0 0 No -22 0.6 No 38 61.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69042014 + NM_133509 RAD51B 0 . . . 1.48 0 14 5.29 No 55 -5.02 No 0 0 No -31 0.22 No 50 86.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41015539 + NM_001164269 RAD51 0 . . . 1.89 74.38 17 5.27 No 8 0.17 No 0 0 No -30 0.4 No 47 40.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29094785 - NM_001005735 CHEK2 0 . . . 2.58 0 24 5.29 No 42 0.57 No 0 0 No -23 0.72 Yes 42 74.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89661442 + NM_000314 PTEN 0 . . . 7.33 77.55 28 5.29 No 69 0.65 No 0 0 No -27 0.76 Yes 33 88.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215661350 - NM_000465 BARD1 0 . . . 6.49 82.11 17 5.24 No 63 -4.65 No 0 0 No -16 0.26 No 46 66.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047547 + NM_000249 MLH1 0 . . . 2.56 0 19 3.64 No 29 1.26 Yes 0 0 No -36 0.91 Yes 29 77.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89641460 + NM_000314 PTEN 0 . . . 7.55 77.95 12 4.9 No 72 -1.87 No 0 0 No -19 0.55 No 46 70.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68652872 + NM_133509 RAD51B 0 . . . 1.11 62.47 28 6.1 Yes 61 -4.81 No 0 0 No -27 0.78 Yes 42 61.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29114769 - NM_001005735 CHEK2 0 . . . 2.15 73.28 32 5.57 Yes 33 1.15 Yes 0 0 No -24 0.78 Yes 50 50.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59889657 - NM_032043 BRIP1 0 . . . 0.36 0 34 6.66 Yes 72 0.03 No 0 0 No -31 0.4 No 51 37.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69063871 + NM_133509 RAD51B 0 . . . 8.2 82.21 17 5.16 No 31 0.87 Yes 0 0 No -41 0.33 No 27 45.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108100535 + NM_000051 ATM 0 . . . 5.67 78.15 17 6.68 Yes 32 1.05 Yes 0 0 No -16 0.56 No 43 80.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190663506 + NM_000534 PMS1 0 . . . 11.17 86.44 36 5.9 Yes 62 0.75 No 0 0 No -35 0.62 No 46 76.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89698388 + NM_000314 PTEN 0 . . . 3.31 80.52 40 5.67 Yes 69 0.12 No 0 0 No -27 0.81 Yes 46 90.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108161104 + NM_000051 ATM 0 . . . 0.68 74.02 14 5.49 No 47 0.48 No 0 0 No -27 0.53 No 54 74.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89648439 + NM_000314 PTEN 0 . . . 0.45 0 26 5.04 No 47 0.66 No 0 0 No -25 0.31 No 52 52.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59780168 - NM_032043 BRIP1 0 . . . 2.38 72.66 26 5.95 Yes 24 0.02 No 0 0 No -25 0.7 Yes 34 48.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105209527 + NM_021930 RINT1 0 . . . 3.9 0 18 4.69 No 65 2.1 Yes 0 0 No -17 0.48 No 47 77.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59935008 - NM_032043 BRIP1 0 . . . 7.83 88.68 23 4.82 No 19 1.59 Yes 0 0 No -22 0.75 Yes 49 90.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69023816 + NM_133509 RAD51B 0 . . . 9.04 93.27 27 5.03 No 66 0.61 No 0 0 No -26 0.57 No 43 89.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47756526 + NM_000251 MSH2 0 . . . 1.25 75.48 21 6.95 Yes 12 0.71 No 0 0 No -20 0.39 No 46 86.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108159334 + NM_000051 ATM 0 . . . 3.26 59.51 14 7.03 Yes 75 0.63 No 0 0 No -29 0.56 No 40 82.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59877661 - NM_032043 BRIP1 0 . . . 9 85.19 29 5.25 No -2 0.92 Yes 0 0 No -24 0.65 No 47 73.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37091751 + NM_000249 MLH1 0 . . . 3.14 80.71 28 5.62 Yes 5 0.36 No 0 0 No -28 0.65 No 47 69.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59891927 - NM_032043 BRIP1 0 . . . 2.45 65.6 32 9.03 Yes 31 0.16 No 0 0 No -31 0.78 Yes 26 50.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41247107 - NM_007294 BRCA1 0 . . . 5.48 81.8 24 5.2 No 50 1.26 Yes 0 0 No -23 0.9 Yes 51 59.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29111090 - NM_001005735 CHEK2 0 . . . 4.12 81.09 41 6.86 Yes 56 0.69 No 0 0 No -31 0.4 No 48 48.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1218114 + NM_000455 STK11 0 . . . 2.09 75.2 61 7.67 Yes 58 -3.88 No 0 0 No -32 0.42 No 48 79.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90953884 - NM_002485 NBN 0 . . . 1.33 67.96 22 4.93 No 35 0.11 No 0 0 No -21 0.63 No 53 30.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56813400 + NM_058216 RAD51C 0 . . . 9.08 77.27 34 5.23 No 2 0.42 No 0 0 No -33 0.63 No 41 77.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68532018 + NM_133509 RAD51B 0 . . . 3.72 82.09 51 3.99 No 72 -4.17 No 0 0 No -30 0.83 Yes 50 60.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68963396 + NM_133509 RAD51B 0 . . . 7.11 74.92 20 5 No 69 -1.31 No 0 0 No -34 0.76 Yes 48 56.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32894375 + NM_000059 BRCA2 0 . . . 0 72.09 32 5.83 Yes 14 0.11 No 0 0 No -27 0.61 No 35 73.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108155178 + NM_000051 ATM 0 . . . 1.28 62.41 16 5.18 No 58 -4.87 No 0 0 No -20 0.35 No 44 51.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69054845 + NM_133509 RAD51B 0 . . . 3.79 80.16 9 5.83 Yes 73 -5.48 No 0 0 No -28 0.74 Yes 47 43.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37084601 + NM_000249 MLH1 0 . . . 0.62 64.19 91 9.65 Yes 72 1.02 Yes 0 0 No -44 0.51 No 33 77.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56781071 + NM_058216 RAD51C 0 . . . 0.83 77.27 24 5.04 No 28 -1.19 No 0 0 No -23 0.86 Yes 46 63.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29090834 - NM_001005735 CHEK2 0 . . . 4.68 76.27 13 5.47 No 47 1.39 Yes 0 0 No -24 0.48 No 11 71.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59804688 - NM_032043 BRIP1 0 . . . 7.46 80.07 42 6.93 Yes 29 0.94 Yes 0 0 No -39 0.36 No 29 90.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40990505 + NM_001164269 RAD51 0 . . . 0.2 83.94 33 3.76 No 33 1.15 Yes 0 0 No -26 0.88 Yes 25 74.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68445388 + NM_133509 RAD51B 0 . . . 3.39 80.87 16 5.06 No 9 0.24 No 0 0 No -45 0.57 No 48 59.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68842608 + NM_133509 RAD51B 0 . . . 3.24 84.71 14 4.43 No 50 -4.06 No 0 0 No -17 0.23 No 47 45.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94154033 - NM_005591 MRE11 0 . . . 5.08 85.02 13 4.79 No 72 0.99 Yes 0 0 No -46 0.75 Yes 42 61.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68596178 + NM_133509 RAD51B 0 . . . 3.64 0 51 5.98 Yes 66 -5.84 No 0 0 No -26 0.67 Yes 47 69.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32914453 + NM_000059 BRCA2 0 . . . 0.74 73.2 22 4.8 No 15 -2.85 No 0 0 No -21 0.95 Yes 18 71.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37048019 + NM_000249 MLH1 0 . . . 5.94 67.15 19 6.06 Yes 73 0.65 No 0 0 No -29 0.6 No 48 37.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84396263 - NM_139076 FAM175A 0 . . . 1.2 60.85 39 5.22 No 22 0.28 No 0 0 No -26 0.61 No 36 84.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68912306 + NM_133509 RAD51B 0 . . . 5.46 75.25 29 5.39 No 6 0.34 No 0 0 No -28 0.37 No 48 53.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41231280 - NM_007294 BRCA1 0 . . . 0.92 72.06 78 7.28 Yes 29 -3.03 No 0 0 No -34 0.39 No 46 54.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32943442 + NM_000059 BRCA2 0 . . . 2.19 68.53 21 5.2 No 27 -3.9 No 0 0 No -28 0.72 Yes 47 29.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68804957 + NM_004360 CDH1 0 . . . 1.3 70.06 21 5 No 55 -1.04 No 0 0 No -20 0.76 Yes 38 39.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47670951 + NM_000251 MSH2 0 . . . 5.61 87.14 17 4.8 No 18 -0.48 No 0 0 No -24 0.67 Yes 40 82.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32920040 + NM_000059 BRCA2 0 . . . 8.59 89.4 31 5.37 No 6 0.05 No 0 0 No -26 0.53 No 43 72.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45807758 - NM_001048171 MUTYH 0 . . . 4.66 76.76 18 4.84 No 4 0.07 No 0 0 No -30 0.55 No 46 74.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41240654 - NM_007294 BRCA1 0 . . . 2.71 70.99 20 5.1 No 13 1.04 Yes 0 0 No -23 0.72 Yes 41 67.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68874717 + NM_133509 RAD51B 0 . . . 2.31 66.91 32 5.3 No 74 -6.77 No 0 0 No -31 0.55 No 48 52.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47803131 + NM_000251 MSH2 0 . . . 3.54 69.44 45 6.88 Yes 6 0.21 No 0 0 No -44 0.54 No 48 69.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68785390 + NM_133509 RAD51B 0 . . . 6.89 73.62 20 5.1 No 17 0.31 No 0 0 No -19 0.75 Yes 41 64.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32961345 + NM_000059 BRCA2 0 . . . 0.77 69.03 14 5.62 Yes 32 -2.52 No 0 0 No -28 0.65 No 51 79.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37092374 + NM_000249 MLH1 0 . . . 5.31 73.68 25 5.9 Yes 31 0.65 No 0 0 No -28 0.88 Yes 39 85.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68869225 + NM_133509 RAD51B 0 . . . 4.72 72.62 46 5.79 Yes 23 1.53 Yes 0 0 No -20 0.8 Yes 53 61.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69089087 + NM_133509 RAD51B 0 . . . 8.15 95.76 46 7 Yes 8 1.56 Yes 0 0 No -22 0.93 Yes 50 92.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68597447 + NM_133509 RAD51B 0 . . . 2.81 66.4 55 6.8 Yes 71 0.64 No 0 0 No -37 0.7 Yes 39 36.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68737196 + NM_133509 RAD51B 0 . . . 1.82 76.71 26 5 No 1 0.59 No 0 0 No -26 0.49 No 49 52.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105191709 + NM_021930 RINT1 0 . . . 2.55 72.35 38 4.32 No -3 -0.1 No 0 0 No -30 0.93 Yes 49 53.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47774696 + NM_000251 MSH2 0 . . . 2.2 80.65 32 5.74 Yes 3 0.81 Yes 0 0 No -28 0.47 No 50 78.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68310087 + NM_133509 RAD51B 0 . . . 3.47 77.49 10 5.34 No 3 0.2 No 0 0 No -26 0.51 No 55 56.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108172106 + NM_000051 ATM 0 . . . 2.1 75.27 12 5.74 Yes 63 -3.19 No 0 0 No -44 0.48 No 42 68.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69095686 + NM_133509 RAD51B 0 . . . 1.69 72.7 19 4.47 No 66 0.25 No 0 0 No -18 0.87 Yes 55 26.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41267116 - NM_007294 BRCA1 0 . . . 0.18 0 15 4.58 No -1 0.47 No 0 0 No -32 0.5 No 44 42.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69041034 + NM_133509 RAD51B 0 . . . 5.3 76.75 31 5.81 Yes 21 1.26 Yes 0 0 No -30 0.58 No 22 52.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6019015 - NM_000535 PMS2 0 . . . 3.01 0 31 4.26 No 13 0.5 No 0 0 No -23 0.46 No 40 62.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69070765 + NM_133509 RAD51B 0 . . . 1.65 0 19 4.59 No 13 1.53 Yes 0 0 No -53 0.43 No 45 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29097709 - NM_001005735 CHEK2 0 . . . 2.66 0 16 5.07 No 11 0.43 No 0 0 No -25 0.79 Yes 50 77.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105192481 + NM_021930 RINT1 0 . . . 2.29 75.86 24 5.48 No 53 0.01 No 0 0 No -21 0.69 Yes 44 69.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29117592 - NM_001005735 CHEK2 0 . . . 4.49 83.87 21 6.56 Yes 57 1.07 Yes 0 0 No -20 0.85 Yes 53 57.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190742347 + NM_000534 PMS1 0 . . . 1.05 60.65 24 5.21 No 49 1.87 Yes 0 0 No -23 0.49 No 45 22.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21987733 - NM_000077 CDKN2A 0 . . . 2.48 82.36 21 7.87 Yes 75 0.73 No 0 0 No -29 0.38 No 49 37.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47638673 + NM_000251 MSH2 0 . . . 2.03 86.71 20 5.1 No 33 1.09 Yes 0 0 No -19 0.68 Yes 51 40.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215609401 - NM_000465 BARD1 0 . . . 1.95 76.63 32 6.48 Yes 58 -3.9 No 0 0 No -31 0.82 Yes 43 67.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68781468 + NM_133509 RAD51B 0 . . . 6.69 78.98 21 4.8 No 9 0.81 Yes 0 0 No -23 0.58 No 42 58.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47795564 + NM_000251 MSH2 0 . . . 0.25 0 12 5.48 No 35 0.03 No 0 0 No -46 0.67 Yes 51 46.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105185643 + NM_021930 RINT1 0 . . . 3.59 65.34 17 4.47 No -3 0.55 No 0 0 No -34 0.69 Yes 29 69.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32917602 + NM_000059 BRCA2 0 . . . 1.54 75.88 26 6.05 Yes 15 0.42 No 0 0 No -25 0.75 Yes 43 83.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23642598 - NM_024675 PALB2 0 . . . 2.3 84.41 42 5.27 No 32 1.76 Yes 0 0 No -26 0.83 Yes 39 81.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215654762 - NM_000465 BARD1 0 . . . 5.21 79.47 19 4.97 No 57 0.54 No 0 0 No -11 0.85 Yes 37 67.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90974575 - NM_002485 NBN 0 . . . 0.59 53.35 28 5.41 No 74 0.67 No 0 0 No -20 0.63 No 44 36.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69068890 + NM_133509 RAD51B 0 . . . 3.64 71.04 27 5.2 No 29 2.12 Yes 0 0 No -26 0.56 No 29 92.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7592165 - NM_000546 TP53 0 . . . 8.04 72.16 28 6.24 Yes 51 0.08 No 0 0 No -27 0.56 No 42 32.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37046999 + NM_000249 MLH1 0 . . . 0.74 65.97 51 7.7 Yes -4 0.58 No 0 0 No -20 0.43 No 62 53.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59927728 - NM_032043 BRIP1 0 . . . 0.09 74.68 36 6.16 Yes 4 0.41 No 0 0 No -35 0.51 No 54 79.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48015072 + NM_000179 MSH6 0 . . . 3.64 75.87 18 6.14 Yes 67 -3.36 No 0 0 No -26 0.74 Yes 36 57.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68870888 + NM_004360 CDH1 0 . . . 3.91 74.31 14 4.47 No 2 0.09 No 0 0 No -13 0.51 No 46 81.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68327542 + NM_133509 RAD51B 0 . . . 0.03 0 25 4.06 No 34 0.52 No 0 0 No -24 0.41 No 34 68.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41020242 + NM_001164269 RAD51 0 . . . 2.24 80.12 47 9.32 Yes 7 1.16 Yes 0 0 No -46 0.85 Yes 51 82.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21990117 - NM_000077 CDKN2A 0 . . . 8.91 80.3 17 5.57 Yes -4 -0.88 No 0 0 No -16 0.64 No 48 67.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68879910 + NM_133509 RAD51B 0 . . . 1.59 60.95 29 5.57 Yes 71 -2.95 No 0 0 No -24 0.65 No 40 61.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47719741 + NM_000251 MSH2 0 . . . 5.52 77.94 19 5.71 Yes 63 1.61 Yes 0 0 No -28 0.85 Yes 52 90.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90947336 - NM_002485 NBN 0 . . . 4.11 79.66 17 4.75 No 25 0.56 No 0 0 No -21 0.63 No 51 63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68952897 + NM_133509 RAD51B 0 . . . 1.96 65.93 12 4.8 No 35 1.33 Yes 0 0 No -19 0.65 No 23 84.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56811330 + NM_058216 RAD51C 0 . . . 2.75 80.37 80 9.17 Yes 11 1.64 Yes 0 0 No -41 0.29 No 52 53.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108096385 + NM_000051 ATM 0 . . . 2.24 80.12 35 7.15 Yes 7 0.57 No 0 0 No -27 0.79 Yes 40 60.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108148922 + NM_000051 ATM 0 . . . 1.68 66.88 41 7.79 Yes 68 -5.58 No 0 0 No -40 0.67 Yes 42 78.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68787452 + NM_004360 CDH1 0 . . . 3.93 79 29 5.44 No 33 1.17 Yes 0 0 No -29 0.61 No 40 47.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131932683 + NM_005732 RAD50 0 . . . 2.65 74.4 19 4.58 No 68 -5.09 No 0 0 No -16 0.42 No 43 65.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108118424 + NM_000051 ATM 0 . . . 3.69 68.14 23 4.68 No 16 1.56 Yes 0 0 No -22 0.56 No 42 94.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48014943 + NM_000179 MSH6 0 . . . 7.67 80.84 44 5.21 No 8 1.04 Yes 0 0 No -43 0.59 No 50 95.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68672288 + NM_133509 RAD51B 0 . . . 0.72 0 18 5.19 No 65 -2.37 No 0 0 No -24 0.8 Yes 49 58.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105200373 + NM_021930 RINT1 0 . . . 4.67 75.13 15 5.2 No 0 1.17 Yes 0 0 No -20 0.44 No 42 71.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75492947 - NM_001040108 MLH3 0 . . . 7.24 86.18 38 7.13 Yes 46 1.53 Yes 0 0 No -37 0.65 No 45 85.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68797944 + NM_004360 CDH1 0 . . . 6.82 87.88 22 5.64 Yes 22 -1.63 No 0 0 No -25 0.83 Yes 52 71.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131906312 + NM_005732 RAD50 0 . . . 2.4 0 32 5.54 No -1 0.18 No 0 0 No -31 0.49 No 41 75.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68792962 + NM_004360 CDH1 0 . . . 0.47 0 15 4.58 No 23 1.63 Yes 0 0 No -19 0.48 No 35 71.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6038478 - NM_000535 PMS2 0 . . . 1.42 80.52 24 5.14 No 75 1.09 Yes 0 0 No -24 0.46 No 49 58.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68863040 + NM_133509 RAD51B 0 . . . 6.31 79.81 33 7.28 Yes 73 -3.53 No 0 0 No -30 0.35 No 30 90.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68377647 + NM_133509 RAD51B 0 . . . 2.93 86.31 20 4.8 No 33 1.12 Yes 0 0 No -24 0.7 Yes 50 52.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59863058 - NM_032043 BRIP1 0 . . . 1.29 74.35 31 5.06 No 11 0.55 No 0 0 No -30 0.73 Yes 47 89.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68959119 + NM_133509 RAD51B 0 . . . 0.43 0 37 6.08 Yes 75 0.84 Yes 0 0 No -36 0.41 No 41 70.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59802797 - NM_032043 BRIP1 0 . . . 3.09 81.29 24 5 No 37 0.14 No 0 0 No -18 0.48 No 36 80.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68842145 + NM_133509 RAD51B 0 . . . 3.86 67.84 18 5.36 No -4 0.94 Yes 0 0 No -24 0.66 No 42 70.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33433147 - NM_002878 RAD51D 0 . . . 9.16 77.41 15 4.58 No 61 0.69 No 0 0 No -28 0.5 No 44 53.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56798682 + NM_058216 RAD51C 0 . . . 3.58 73.49 30 5.3 No 40 -0.8 No 0 0 No -30 0.86 Yes 28 78.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41276304 - NM_007294 BRCA1 0 . . . 1.46 59.91 22 5.1 No 25 -2.66 No 0 0 No -44 0.44 No 42 69.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68906306 + NM_133509 RAD51B 0 . . . 8.51 79.99 36 5.61 Yes 34 0.57 No 0 0 No -28 0.78 Yes 24 57.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59879084 - NM_032043 BRIP1 0 . . . 0.81 75.19 19 4.77 No 45 -3.53 No 0 0 No -19 0.59 No 51 80.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41272129 - NM_007294 BRCA1 0 . . . 3.55 57.68 21 6.4 Yes 61 0.93 Yes 0 0 No -20 0.68 Yes 26 86.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68704713 + NM_133509 RAD51B 0 . . . 2.41 68.34 15 5.18 No 21 1.19 Yes 0 0 No -47 0.52 No 45 61.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108174241 + NM_000051 ATM 0 . . . 3.57 66.2 25 6.4 Yes 65 -3.08 No 0 0 No -26 0.69 Yes 30 55.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69016177 + NM_133509 RAD51B 0 . . . 4.08 84.17 40 6.7 Yes 57 0.4 No 0 0 No -39 0.42 No 14 75.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89637713 + NM_000314 PTEN 0 . . . 1.39 0 31 5.66 Yes 44 -1.87 No 0 0 No -30 0.67 Yes 37 66.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47660331 + NM_000251 MSH2 0 . . . 1.37 67.97 9 3.87 No 31 2.23 Yes 0 0 No -59 0.7 Yes 27 73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1215381 + NM_000455 STK11 0 . . . 0.77 73.44 16 4 No 39 -2.39 No 0 0 No -18 0.43 No 43 83.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48007531 + NM_000179 MSH6 0 . . . 7.6 88.87 18 4.64 No 5 0.44 No 0 0 No -27 0.59 No 47 81.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68568441 + NM_133509 RAD51B 0 . . . 10.19 90.2 28 5.66 Yes 22 -1.89 No 0 0 No -35 0.52 No 50 87.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190702820 + NM_000534 PMS1 0 . . . 5.41 78.92 20 4.75 No 60 0.79 Yes 0 0 No -19 0.88 Yes 48 52.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68782573 + NM_004360 CDH1 0 . . . 1.45 81.08 33 7.93 Yes 68 1.19 Yes 0 0 No -32 0.84 Yes 54 47.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190737901 + NM_000534 PMS1 0 . . . 0.57 62.43 31 4.34 No 75 -6.82 No 0 0 No -25 0.52 No 47 30.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68339732 + NM_133509 RAD51B 0 . . . 3.67 82.91 17 6.47 Yes 69 -4.91 No 0 0 No -29 0.7 Yes 54 33.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68775008 + NM_133509 RAD51B 0 . . . 0.3 74.08 18 4.58 No 41 0.18 No 0 0 No -22 0.9 Yes 17 89.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190665510 + NM_000534 PMS1 0 . . . 0.96 67.86 32 4.56 No 57 -5.81 No 0 0 No -32 0.89 Yes 49 83.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47771765 + NM_000251 MSH2 0 . . . 4.89 83.94 9 4.75 No -3 0.79 Yes 0 0 No -22 0.36 No 44 80.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68434463 + NM_133509 RAD51B 0 . . . 7.71 85.51 29 5.38 No 69 -1.61 No 0 0 No -33 0.72 Yes 44 87.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94179429 - NM_005591 MRE11 0 . . . 2.55 73.13 48 7.35 Yes 76 0.95 Yes 0 0 No -47 0.95 Yes 49 76.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108146180 + NM_000051 ATM 0 . . . 2.49 0 17 4.8 No 29 1.89 Yes 0 0 No -16 0.43 No 53 70.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94179026 - NM_005591 MRE11 0 . . . 1.11 83.86 23 7.09 Yes 42 1.65 Yes 0 0 No -22 0.67 Yes 16 50.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47667193 + NM_000251 MSH2 0 . . . 8.1 83.32 18 6.64 Yes -4 1.02 Yes 0 0 No -33 0.63 No 46 92.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69009241 + NM_133509 RAD51B 0 . . . 1.53 67.72 37 6.56 Yes 64 -5.88 No 0 0 No -36 0.57 No 47 69.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56804226 + NM_058216 RAD51C 0 . . . 3.61 84.17 25 5.51 No 41 1.21 Yes 0 0 No -24 0.72 Yes 17 67.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48012895 + NM_000179 MSH6 0 . . . 1.18 74.54 20 4.8 No 6 0.94 Yes 0 0 No -19 0.8 Yes 49 67.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47643978 + NM_000251 MSH2 0 . . . 5.76 78.96 15 4.07 No 2 0.98 Yes 0 0 No -33 0.45 No 42 49.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68559496 + NM_133509 RAD51B 0 . . . 6.38 80.98 30 5.58 Yes 61 -2.05 No 0 0 No -29 0.9 Yes 43 79.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68956790 + NM_133509 RAD51B 0 . . . 2.8 69.05 25 4.86 No 25 0.9 Yes 0 0 No -24 0.66 No 36 60.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68776262 + NM_133509 RAD51B 0 . . . 3.1 77.02 37 5.86 Yes 60 -4.41 No 0 0 No -25 0.62 No 49 75.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215609282 - NM_000465 BARD1 0 . . . 4.31 78.13 28 5.14 No 50 0.78 Yes 0 0 No -27 0.82 Yes 36 54.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108116126 + NM_000051 ATM 0 . . . 2.85 77.43 27 4.62 No -1 0.21 No 0 0 No -27 0.47 No 48 83.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68964545 + NM_133509 RAD51B 0 . . . 3.92 69.24 16 5.19 No 22 0.07 No 0 0 No -23 0.75 Yes 50 52.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47648662 + NM_000251 MSH2 0 . . . 3.05 82.88 46 6.87 Yes 11 1.65 Yes 0 0 No -29 0.58 No 47 62.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68479602 + NM_133509 RAD51B 0 . . . 0.19 73.59 18 6.83 Yes 67 2.18 Yes 0 0 No -29 0.68 Yes 32 79.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47682817 + NM_000251 MSH2 0 . . . 4.06 74.77 48 7.35 Yes 48 0.2 No 0 0 No -47 0.64 No 46 74.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32936186 + NM_000059 BRCA2 0 . . . 2.71 0 37 5.23 No 33 1 Yes 0 0 No -42 0.58 No 32 53.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108159356 + NM_000051 ATM 0 . . . 2.89 69.12 23 5.79 Yes 53 0 No 0 0 No -31 0.44 No 42 77.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152370787 - NM_005431 XRCC2 0 . . . 9.24 85.89 31 6.38 Yes 14 1.46 Yes 0 0 No -31 0.73 Yes 44 93.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89658453 + NM_000314 PTEN 0 . . . 3.31 0 15 5.29 No 37 0.68 No 0 0 No -25 0.26 No 21 62.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68444939 + NM_133509 RAD51B 0 . . . 5.88 80.09 29 5.47 No 41 0.63 No 0 0 No -20 0.44 No 35 41.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68502082 + NM_133509 RAD51B 0 . . . 2.75 76.2 16 6.16 Yes 6 0.7 No 0 0 No -29 0.43 No 37 88.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68601203 + NM_133509 RAD51B 0 . . . 1.73 67.93 40 6.24 Yes 70 0.38 No 0 0 No -39 0.41 No 44 68.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190739401 + NM_000534 PMS1 0 . . . 7.37 78.56 24 5.2 No 62 1.37 Yes 0 0 No -23 0.63 No 38 60.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215632627 - NM_000465 BARD1 0 . . . 3.84 71.82 20 7.14 Yes 61 0.34 No 0 0 No -19 0.73 Yes 44 46.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68931155 + NM_133509 RAD51B 0 . . . 9.08 85.09 43 6.99 Yes 27 0.97 Yes 0 0 No -42 0.93 Yes 44 79.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47645506 + NM_000251 MSH2 0 . . . 7.15 83.45 23 4.7 No 48 0.53 No 0 0 No -20 0.32 No 40 47.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131954333 + NM_005732 RAD50 0 . . . 2.89 68.34 66 6.59 Yes 23 1.55 Yes 0 0 No -30 0.6 No 35 53.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47646335 + NM_000251 MSH2 0 . . . 2.12 70.76 22 4.8 No 46 1.44 Yes 0 0 No -21 0.97 Yes 12 45.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47753012 + NM_000251 MSH2 0 . . . 8.3 86.33 22 3.55 No 76 -3.95 No 0 0 No -19 0.26 No 50 78.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29131677 - NM_001005735 CHEK2 0 . . . 2.01 78.28 28 5.16 No 33 1.16 Yes 0 0 No -59 0.9 Yes 25 67.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131922607 + NM_005732 RAD50 0 . . . 0.11 59.81 25 5.39 No 27 -2.81 No 0 0 No -24 0.77 Yes 42 43.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29135996 - NM_001005735 CHEK2 0 . . . 1.85 73.97 37 6.96 Yes 33 0.68 No 0 0 No -36 0.42 No 39 42.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69033080 + NM_133509 RAD51B 0 . . . 8.75 81.56 22 4.69 No 72 1.13 Yes 0 0 No -21 0.96 Yes 38 45.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89661263 + NM_000314 PTEN 0 . . . 6.17 79.05 21 5.88 Yes 30 1.05 Yes 0 0 No -25 0.56 No 48 77.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94222008 - NM_005591 MRE11 0 . . . 1.04 66.08 24 5.83 Yes 15 -2.72 No 0 0 No -23 0.88 Yes 63 41.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190703980 + NM_000534 PMS1 0 . . . 3.42 70.85 30 6.85 Yes 23 1.57 Yes 0 0 No -30 0.76 Yes 45 66.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75507248 - NM_001040108 MLH3 0 . . . 4.75 91.04 15 4.58 No 12 0.43 No 0 0 No -57 0.59 No 46 46.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41259906 - NM_007294 BRCA1 0 . . . 0.47 0 34 5.72 Yes 9 0.64 No 0 0 No -26 0.77 Yes 32 93.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37091945 + NM_000249 MLH1 0 . . . 1.95 68.45 16 4.63 No 73 -3.18 No 23 0.9 Yes -19 0.53 No 47 47.13 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 41018568 + NM_001164269 RAD51 0 . . . 1.08 84.22 32 7.17 Yes 33 1.13 Yes 0 0 No -31 0.96 Yes 25 41.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68473586 + NM_133509 RAD51B 0 . . . 0.54 0 22 5.1 No 32 1.43 Yes 0 0 No -21 0.67 Yes 26 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84397717 - NM_139076 FAM175A 0 . . . 3.09 74.87 67 5.52 No 69 -3.86 No 0 0 No -32 0.78 Yes 43 38.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68499603 + NM_133509 RAD51B 0 . . . 2.51 0 12 4.08 No 3 1.31 Yes 0 0 No -28 0.55 No 55 65.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68884302 + NM_133509 RAD51B 0 . . . 1.2 73.33 17 4.93 No 25 0.32 No 0 0 No -29 0.66 No 50 65.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68444640 + NM_133509 RAD51B 0 . . . 4.47 70.92 41 4.58 No 63 0.33 No 0 0 No -17 0.47 No 41 61.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90968414 - NM_002485 NBN 0 . . . 0.84 64.17 29 7.93 Yes 26 2.62 Yes 0 0 No -22 0.39 No 32 91.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68709697 + NM_133509 RAD51B 0 . . . 7.08 80.11 34 5.42 No 4 1.19 Yes 0 0 No -30 0.39 No 41 66.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68857820 + NM_133509 RAD51B 0 . . . 0.61 0 21 4.69 No 74 0.37 No 0 0 No -20 0.91 Yes 45 95.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69066190 + NM_133509 RAD51B 0 . . . 6.33 89.37 26 6.62 Yes 72 -6.64 No 0 0 No -31 0.64 No 54 65.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68715822 + NM_133509 RAD51B 0 . . . 4.58 76.91 21 5.04 No 40 0.86 Yes 0 0 No -20 0.38 No 45 53.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94216970 - NM_005591 MRE11 0 . . . 0.98 0 17 5.74 Yes 70 1.8 Yes 0 0 No -28 0.45 No 14 42.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56811081 + NM_058216 RAD51C 0 . . . 4.56 80.97 21 4.98 No 6 0.19 No 0 0 No -45 0.74 Yes 42 94.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7576436 - NM_000546 TP53 0 . . . 1.34 0 11 4.12 No 27 0.23 No 0 0 No -25 0.43 No 31 82.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108109667 + NM_000051 ATM 0 . . . 6.06 87.59 33 5.69 Yes 33 0.97 Yes 0 0 No -23 0.81 Yes 41 71.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69098237 + NM_133509 RAD51B 0 . . . 0.81 0 20 4.31 No -3 0.01 No 0 0 No -24 0.57 No 61 28.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41008748 + NM_001164269 RAD51 0 . . . 2.24 80.12 24 5.36 No 7 1.36 Yes 0 0 No -24 0.48 No 51 83.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41263319 - NM_007294 BRCA1 0 . . . 5.57 82.31 31 4.48 No 58 1.15 Yes 0 0 No -22 0.55 No 53 29.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108222749 + NM_000051 ATM 0 . . . 5.02 81.69 16 5.37 No -3 0.5 No 0 0 No -37 0.28 No 48 51.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94211161 - NM_005591 MRE11 0 . . . 6.43 81.93 28 5.17 No 71 1.58 Yes 0 0 No -27 0.68 Yes 49 34.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68325585 + NM_133509 RAD51B 0 . . . 6.35 85.49 29 5.39 No 64 0.67 No 0 0 No -28 0.85 Yes 37 62.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68869615 + NM_133509 RAD51B 0 . . . 0.6 74.69 25 5.57 Yes 4 1.3 Yes 0 0 No -24 0.77 Yes 54 51.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108188187 + NM_000051 ATM 0 . . . 1.97 65.31 27 4.6 No 32 -4.06 No 0 0 No -26 0.68 Yes 48 34.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45803325 - NM_001048171 MUTYH 0 . . . 0.15 70.84 13 5.46 No 16 0.93 Yes 0 0 No -26 0.3 No 42 93.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41243786 - NM_007294 BRCA1 0 . . . 1.2 0 15 3.31 No 48 0.15 No 0 0 No -20 0.57 No 52 64.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68352488 + NM_133509 RAD51B 0 . . . 2.82 70.4 22 4.8 No 21 0.81 Yes 0 0 No -25 0.49 No 37 65.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68502398 + NM_133509 RAD51B 0 . . . 3.86 80.2 24 5.48 No 76 -3.75 No 0 0 No -23 0.86 Yes 47 87.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105178621 + NM_021930 RINT1 0 . . . 2.2 78.68 15 3.54 No 66 0.7 No 0 0 No -30 0.39 No 54 70.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68307565 + NM_133509 RAD51B 0 . . . 2.4 81.11 18 4.72 No 32 1.25 Yes 0 0 No -25 0.42 No 18 58.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190709604 + NM_000534 PMS1 0 . . . 1.61 83.78 16 4.69 No 16 0.62 No 0 0 No -21 0.81 Yes 35 57.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21969712 - NM_000077 CDKN2A 0 . . . 4.08 65.37 23 5.37 No 67 -2.17 No 0 0 No -28 0.48 No 45 73.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59766165 - NM_032043 BRIP1 0 . . . 2.2 74.62 24 5.74 Yes 44 0.63 No 0 0 No -28 0.62 No 14 51.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68422380 + NM_133509 RAD51B 0 . . . 2.73 68.55 19 5 No 45 -4.19 No 0 0 No -18 0.65 No 51 55.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131912910 + NM_005732 RAD50 0 . . . 6.54 75.18 28 5.74 Yes 3 1.07 Yes 0 0 No -27 0.74 Yes 45 74.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68747226 + NM_133509 RAD51B 0 . . . 7.88 83.68 11 4.12 No 17 0.68 No 0 0 No -26 0.41 No 47 72.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37080001 + NM_000249 MLH1 0 . . . 3.37 75.26 28 5.56 Yes 2 1 Yes 0 0 No -27 0.71 Yes 23 34.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69039050 + NM_133509 RAD51B 0 . . . 2.84 0 23 4.69 No 24 0.82 Yes 0 0 No -22 0.59 No 34 87.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94215580 - NM_005591 MRE11 0 . . . 1.63 80.59 31 6.08 Yes 14 1.13 Yes 0 0 No -30 0.94 Yes 44 53.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105202802 + NM_021930 RINT1 0 . . . 2.74 72.36 35 6.08 Yes 19 1.13 Yes 0 0 No -34 0.88 Yes 39 92.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68961843 + NM_133509 RAD51B 0 . . . 3.07 82.32 37 6.84 Yes 0 1.02 Yes 0 0 No -26 0.82 Yes 52 38.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45806849 - NM_001048171 MUTYH 0 . . . 2.84 71.35 52 6.29 Yes 62 0.64 No 0 0 No -35 0.55 No 52 48.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68841468 + NM_133509 RAD51B 0 . . . 5.29 75.84 25 5.29 No 21 0.32 No 0 0 No -24 0.94 Yes 37 96.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131976069 + NM_005732 RAD50 0 . . . 6.94 80.47 16 4.69 No 27 -2.03 No 0 0 No -18 0.4 No 42 49.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21986910 - NM_000077 CDKN2A 0 . . . 5.14 67.35 14 4 No 9 1.09 Yes 0 0 No -29 0.72 Yes 37 73.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75503195 - NM_001040108 MLH3 0 . . . 0.47 62.8 28 5.74 Yes 37 1 Yes 0 0 No -27 0.75 Yes 52 32.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94168209 - NM_005591 MRE11 0 . . . 5.34 72.79 25 5.19 No 56 0.91 Yes 0 0 No -20 0.37 No 24 81.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68782554 + NM_004360 CDH1 0 . . . 3.11 74.74 37 6.91 Yes 49 1.2 Yes 0 0 No -23 0.52 No 20 54.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94165969 - NM_005591 MRE11 0 . . . 2.14 83.57 17 4.36 No 42 0.6 No 0 0 No -23 0.56 No 16 80.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75500703 - NM_001040108 MLH3 0 . . . 1.23 74.73 43 6.67 Yes 33 1.01 Yes 0 0 No -40 0.62 No 25 56.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41222533 - NM_007294 BRCA1 0 . . . 3.26 70.13 23 5.02 No 40 -3.2 No 0 0 No -23 0.63 No 40 47.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23626018 - NM_024675 PALB2 0 . . . 1.73 76.63 33 4.94 No 15 0.33 No 0 0 No -20 0.32 No 43 71.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68818182 + NM_133509 RAD51B 0 . . . 0.48 62.7 15 5.66 Yes 45 0.48 No 0 0 No -25 0.52 No 62 26.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7588042 - NM_000546 TP53 0 . . . 7.63 92.75 33 5.97 Yes 67 1.67 Yes 0 0 No -32 0.26 No 38 88.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68586922 + NM_133509 RAD51B 0 . . . 3.05 0 32 8.96 Yes 48 1.26 Yes 0 0 No -31 0.3 No 22 89.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152356763 - NM_005431 XRCC2 0 . . . 2.46 76.65 52 8.12 Yes 20 0.54 No 0 0 No -51 0.73 Yes 38 76.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59794425 - NM_032043 BRIP1 0 . . . 0.81 65.05 28 6.14 Yes 27 0.97 Yes 0 0 No -32 0.66 No 36 86.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29121429 - NM_001005735 CHEK2 0 . . . 3.8 72.67 30 5.81 Yes 20 1.36 Yes 0 0 No -29 0.74 Yes 49 75.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68811466 + NM_004360 CDH1 0 . . . 3.59 87.56 32 5.83 Yes 25 1.68 Yes 0 0 No -31 0.89 Yes 33 86.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48017457 + NM_000179 MSH6 0 . . . 3.81 89.61 24 3.25 No 36 -3.21 No 0 0 No -24 0.62 No 39 72.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47697330 + NM_000251 MSH2 0 . . . 5.12 82.77 11 4.12 No 3 1.51 Yes 0 0 No -39 0.81 Yes 48 56.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89631664 + NM_000314 PTEN 0 . . . 2.2 66.65 14 5.48 No 57 1.13 Yes 0 0 No -23 0.46 No 45 91.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68603601 + NM_133509 RAD51B 0 . . . 4.48 70.96 21 5.91 Yes 66 -5.83 No 0 0 No -20 0.88 Yes 42 59.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47739449 + NM_000251 MSH2 0 . . . 0.72 0 19 4.07 No 63 0.76 No 0 0 No -20 0.22 No 33 92.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108185651 + NM_000051 ATM 0 . . . 6.6 72.97 34 5.77 Yes 34 0.12 No 0 0 No -27 0.62 No 42 94.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105201618 + NM_021930 RINT1 0 . . . 1.15 66.05 20 3.76 No 31 0.46 No 0 0 No -19 0.47 No 47 64.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47759508 + NM_000251 MSH2 0 . . . 8.59 81.51 31 5.65 Yes 33 1.33 Yes 0 0 No -28 0.86 Yes 41 63.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75484497 - NM_001040108 MLH3 0 . . . 0.61 0 14 4.47 No 38 2.33 Yes 0 0 No -34 0.86 Yes 34 69.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131921095 + NM_005732 RAD50 0 . . . 0.3 67.67 22 4.94 No 69 1.06 Yes 0 0 No -21 0.65 No 54 74.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68858244 + NM_133509 RAD51B 0 . . . 4.73 88.19 13 4.36 No 14 0.8 Yes 0 0 No -34 0.53 No 44 95.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29132958 - NM_001005735 CHEK2 0 . . . 6.7 81.33 16 4.02 No 13 0.35 No 0 0 No -25 0.62 No 39 51.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68868470 + NM_004360 CDH1 0 . . . 0.66 76.43 29 6.86 Yes 16 0.75 No 0 0 No -28 0.83 Yes 42 50.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68753925 + NM_133509 RAD51B 0 . . . 8.13 83.64 26 5.09 No 17 0.52 No 0 0 No -25 0.62 No 48 65.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108236322 + NM_000051 ATM 0 . . . 1.74 73.38 16 6.56 Yes 58 1.02 Yes 0 0 No -29 0.41 No 47 59.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41017280 + NM_001164269 RAD51 0 . . . 5.2 85.02 23 4.42 No 5 1.23 Yes 0 0 No -22 0.64 No 53 85.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68311637 + NM_133509 RAD51B 0 . . . 3.39 71.12 18 4.69 No 28 -1.99 No 0 0 No -17 0.74 Yes 44 55.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47772636 + NM_000251 MSH2 0 . . . 6.8 87.03 11 5.29 No 68 -2.66 No 0 0 No -23 0.48 No 45 76.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59934042 - NM_032043 BRIP1 0 . . . 1.29 69.69 12 4.24 No 4 0.99 Yes 0 0 No -49 0.51 No 41 88.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105207188 + NM_021930 RINT1 0 . . . 7.07 76.9 23 5.2 No 41 0.1 No 0 0 No -20 0.65 No 51 68.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104167463 - NM_001100119 XRCC3 0 . . . 3.51 74.1 14 6.24 Yes 7 0.84 Yes 0 0 No -32 0.67 Yes 50 48.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131925024 + NM_005732 RAD50 0 . . . 5.88 81.24 17 3.95 No 61 0.27 No 0 0 No -15 0.72 Yes 45 80.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94172795 - NM_005591 MRE11 0 . . . 0.86 74.84 32 5.92 Yes 71 -4.96 No 0 0 No -25 0.69 Yes 44 68.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69123086 + NM_133509 RAD51B 0 . . . 0.62 0 24 5.48 No 68 0.7 No 0 0 No -24 0.58 No 51 79.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68372845 + NM_133509 RAD51B 0 . . . 1.91 70.56 21 5.68 Yes 2 0.42 No 0 0 No -29 0.85 Yes 42 82.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33430904 - NM_002878 RAD51D 0 . . . 0.42 74.73 34 5.82 Yes 33 0.89 Yes 0 0 No -33 0.7 Yes 25 41.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108199312 + NM_000051 ATM 0 . . . 7.74 91.35 21 5.1 No 26 1.3 Yes 0 0 No -20 0.86 Yes 48 70.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6039025 - NM_000535 PMS2 0 . . . 5.55 80.61 16 5.35 No 64 0.7 No 0 0 No -28 0.45 No 50 95.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48033696 + NM_000179 MSH6 0 . . . 1.74 78.1 14 4 No 46 0.51 No 0 0 No -33 0.69 Yes 49 71.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59911172 - NM_032043 BRIP1 0 . . . 1.23 67.39 12 4.8 No 37 -2.17 No 0 0 No -40 0.77 Yes 37 57.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23647827 - NM_024675 PALB2 0 . . . 3.34 84.21 17 4.8 No 4 1.73 Yes 0 0 No -20 0.68 Yes 48 87.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190648290 + NM_000534 PMS1 0 . . . 6.67 80.27 20 6.48 Yes 6 1 Yes 0 0 No -19 0.66 No 52 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89652249 + NM_000314 PTEN 0 . . . 1.91 60.54 18 4.25 No 70 1.21 Yes 0 0 No -34 0.67 Yes 21 66.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59942249 - NM_032043 BRIP1 0 . . . 3.15 68.34 11 4.58 No 21 1.7 Yes 0 0 No -19 0.47 No 37 75.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68691730 + NM_133509 RAD51B 0 . . . 5.43 82.13 19 4.36 No 72 0.91 Yes 0 0 No -21 0.46 No 48 52.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68958984 + NM_133509 RAD51B 0 . . . 4.31 76.37 27 5.2 No 22 1.67 Yes 0 0 No -26 0.52 No 36 93.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37072543 + NM_000249 MLH1 0 . . . 3.7 68.5 14 4.23 No 1 0.22 No 0 0 No -43 0.43 No 45 65.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68783044 + NM_004360 CDH1 0 . . . 7.18 70.56 17 4.8 No 64 1.55 Yes 0 0 No -23 0.35 No 48 45.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41018353 + NM_001164269 RAD51 0 . . . 1.52 70.48 34 7.7 Yes 17 0.05 No 0 0 No -33 0.67 Yes 46 93.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69093929 + NM_133509 RAD51B 0 . . . 2.72 74.94 16 3.58 No 73 1.5 Yes 0 0 No -19 0.42 No 28 78.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190695754 + NM_000534 PMS1 0 . . . 1.28 0 18 4.62 No 15 1.1 Yes 0 0 No -21 0.54 No 43 76.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56769262 + NM_058216 RAD51C 0 . . . 0.99 0 28 5.8 Yes 74 0.71 No 0 0 No -31 0.42 No 41 80.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69138034 + NM_133509 RAD51B 0 . . . 2.47 71.52 22 4.8 No 8 -2.57 No 0 0 No -21 0.64 No 39 84.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69064148 + NM_133509 RAD51B 0 . . . 3.66 72.93 18 5.4 No 19 0.3 No 0 0 No -23 0.8 Yes 39 41.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94222052 - NM_005591 MRE11 0 . . . 0.06 75.98 25 5.87 Yes 40 -2.84 No 0 0 No -24 0.81 Yes 47 72.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68461068 + NM_133509 RAD51B 0 . . . 0.41 70.68 35 7.25 Yes -4 0.01 No 0 0 No -34 0.59 No 44 37.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190700096 + NM_000534 PMS1 0 . . . 6.35 88.76 15 5.3 No 30 1.04 Yes 0 0 No -24 0.32 No 42 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68321102 + NM_133509 RAD51B 0 . . . 0.09 74.68 21 5.97 Yes 4 0.41 No 0 0 No -20 0.56 No 54 63.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68844981 + NM_133509 RAD51B 0 . . . 2.89 71.91 42 6.86 Yes 59 0.81 Yes 0 0 No -37 0.69 Yes 39 71.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68557334 + NM_133509 RAD51B 0 . . . 7.57 90.78 24 5.35 No -1 1.28 Yes 0 0 No -23 0.79 Yes 47 43.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41275890 - NM_007294 BRCA1 0 . . . 2.51 80.31 25 5.18 No 4 1.25 Yes 0 0 No -24 0.81 Yes 47 54.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33426470 - NM_002878 RAD51D 0 . . . 0.44 76.02 24 4.97 No 12 0.27 No 0 0 No -24 0.62 No 46 84.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68684618 + NM_133509 RAD51B 0 . . . 0.64 0 33 5.45 No 47 -2.31 No 0 0 No -28 0.71 Yes 44 66.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867713 - NM_032043 BRIP1 0 . . . 1.86 80.34 25 6.36 Yes 34 1.2 Yes 0 0 No -23 0.35 No 24 57.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68911267 + NM_133509 RAD51B 0 . . . 3.65 81.91 51 6.47 Yes 48 -3.97 No 0 0 No -23 0.82 Yes 49 73.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33429524 - NM_002878 RAD51D 0 . . . 3.77 88.27 14 4.82 No 56 0.89 Yes 0 0 No -22 0.68 Yes 44 62.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68287750 + NM_133509 RAD51B 0 . . . 8.04 76.52 11 5.83 Yes 41 0.92 Yes 0 0 No -27 0.51 No 38 58.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68638608 + NM_133509 RAD51B 0 . . . 3.21 80.12 21 5.2 No 7 1.37 Yes 0 0 No -20 0.6 No 51 79.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47729102 + NM_000251 MSH2 0 . . . 0.66 62.62 20 6.32 Yes 68 1.26 Yes 0 0 No -24 0.36 No 13 47.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59939593 - NM_032043 BRIP1 0 . . . 7.16 87.72 16 5.01 No 38 0.89 Yes 0 0 No -22 0.28 No 47 53.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68433084 + NM_133509 RAD51B 0 . . . 5.9 69.83 34 5.06 No 1 0.65 No 0 0 No -25 0.51 No 44 64.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37043826 + NM_000249 MLH1 0 . . . 1.18 64.72 26 5 No 49 1.06 Yes 0 0 No -25 0.88 Yes 21 73.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59757255 - NM_032043 BRIP1 0 . . . 7.05 88.65 40 6.24 Yes 11 0.11 No 0 0 No -39 0.8 Yes 47 40.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68346986 + NM_133509 RAD51B 0 . . . 5.21 81.92 18 4.23 No 52 0.93 Yes 0 0 No -17 0.31 No 47 47.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90982259 - NM_002485 NBN 0 . . . 6.24 82.31 23 7.73 Yes 58 1 Yes 0 0 No -22 0.66 Yes 55 57.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37092556 + NM_000249 MLH1 0 . . . 2.93 84.41 19 3.91 No 27 0.72 No 0 0 No -24 0.61 No 42 84.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52446013 - NM_004656 BAP1 0 . . . 2.08 77.82 13 5.66 Yes 51 0.93 Yes 0 0 No -22 0.4 No 42 57.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215595766 - NM_000465 BARD1 0 . . . 10.31 88.88 21 4.8 No 43 0.35 No 0 0 No -20 0.74 Yes 43 59.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89726482 + NM_000314 PTEN 0 . . . 3.56 75.9 23 5 No 55 0.88 Yes 0 0 No -22 0.85 Yes 42 75.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90971361 - NM_002485 NBN 0 . . . 2.67 62.23 16 6.59 Yes 27 0.48 No 0 0 No -37 0.47 No 47 84.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68401861 + NM_133509 RAD51B 0 . . . 2.4 68.42 14 5.46 No -1 0.47 No 0 0 No -23 0.38 No 41 45.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68451837 + NM_133509 RAD51B 0 . . . 3.11 67.48 21 3.69 No 76 -2.91 No 0 0 No -29 0.64 No 45 53.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69069532 + NM_133509 RAD51B 0 . . . 3.25 68.37 16 5.73 Yes 62 0.23 No 0 0 No -30 0.54 No 43 73.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32919648 + NM_000059 BRCA2 0 . . . 2.63 73.12 28 5.74 Yes 50 1.43 Yes 0 0 No -28 0.65 No 44 31.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69096246 + NM_133509 RAD51B 0 . . . 0.07 81.48 19 6.38 Yes 24 1.25 Yes 0 0 No -22 0.58 No 46 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94216437 - NM_005591 MRE11 0 . . . 2.77 75.84 18 5.09 No 2 1.43 Yes 0 0 No -23 0.2 No 42 42.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108155416 + NM_000051 ATM 0 . . . 0.48 69.51 28 5.19 No 58 0.26 No 0 0 No -27 0.62 No 49 80.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69012025 + NM_133509 RAD51B 0 . . . 2.84 75.75 19 4.54 No 39 0.03 No 0 0 No -28 0.65 No 45 67.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94170873 - NM_005591 MRE11 0 . . . 4.41 77.6 27 5.69 Yes 63 -3.36 No 0 0 No -26 0.79 Yes 51 72.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69035457 + NM_133509 RAD51B 0 . . . 3.51 76.23 26 5.95 Yes 72 -3.96 No 0 0 No -28 0.55 No 51 84.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68812889 + NM_133509 RAD51B 0 . . . 8.58 85.49 24 5.12 No 34 0.91 Yes 0 0 No -23 0.93 Yes 40 67.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32897831 + NM_000059 BRCA2 0 . . . 6.11 78.55 9 5 No 0 0.59 No 0 0 No -48 0.2 No 46 60.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23617465 - NM_024675 PALB2 0 . . . 3.55 70.03 39 5.69 Yes 16 -2.32 No 0 0 No -27 0.47 No 16 43.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48034283 + NM_000179 MSH6 0 . . . 0.32 65.67 46 6.93 Yes 33 -2.39 No 0 0 No -26 0.64 No 13 18.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47743324 + NM_000251 MSH2 0 . . . 8.39 96.14 21 5.2 No 38 0.8 Yes 0 0 No -20 0.78 Yes 46 61.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68321992 + NM_133509 RAD51B 0 . . . 4.9 84.95 20 5.89 Yes 38 0.09 No 0 0 No -25 0.48 No 23 73.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48010345 + NM_000179 MSH6 0 . . . 2.36 78.07 14 4 No 6 -2.74 No 0 0 No -41 0.54 No 52 27.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68837195 + NM_133509 RAD51B 0 . . . 1.58 73.61 21 4.69 No 72 -4 No 0 0 No -20 0.7 Yes 50 45.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68365594 + NM_133509 RAD51B 0 . . . 3.76 74.95 22 5.29 No 75 -6.02 No 0 0 No -26 0.55 No 53 34.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90950479 - NM_002485 NBN 0 . . . 0.67 0 36 6.43 Yes 67 0.78 Yes 0 0 No -19 0.36 No 33 62.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215665221 - NM_000465 BARD1 0 . . . 1.01 82.21 11 4.8 No 64 0.49 No 0 0 No -25 0.78 Yes 16 66.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56807051 + NM_058216 RAD51C 0 . . . 2.22 86.31 28 5.26 No 76 1.48 Yes 0 0 No -27 0.73 Yes 46 91.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21985657 - NM_000077 CDKN2A 0 . . . 4.17 0 33 5.66 Yes 9 0.72 No 0 0 No -32 0.57 No 36 86.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69053608 + NM_133509 RAD51B 0 . . . 2.01 74.68 29 4.18 No 61 0.99 Yes 0 0 No -22 0.86 Yes 36 66.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108195210 + NM_000051 ATM 0 . . . 0.07 54.48 73 7.14 Yes 46 0.87 Yes 0 0 No -27 0.46 No 22 69.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56790367 + NM_058216 RAD51C 0 . . . 2.09 67.29 42 6.86 Yes 50 0.21 No 0 0 No -32 0.47 No 50 40.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69100912 + NM_133509 RAD51B 0 . . . 3.15 73.61 27 6.4 Yes 30 1.33 Yes 0 0 No -26 0.83 Yes 28 43.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68820841 + NM_004360 CDH1 0 . . . 0.26 0 33 5 No 38 0.03 No 0 0 No -22 0.23 No 50 25.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59917527 - NM_032043 BRIP1 0 . . . 0.51 74.73 18 5.99 Yes 49 0.98 Yes 0 0 No -31 0.75 Yes 43 41.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75511744 - NM_001040108 MLH3 0 . . . 3.55 62.08 19 4.62 No 66 1.54 Yes 0 0 No -18 0.91 Yes 46 68.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29113985 - NM_001005735 CHEK2 0 . . . 3.06 66.46 33 4.77 No 59 0.73 No 0 0 No -33 0.62 No 47 69.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68797339 + NM_004360 CDH1 0 . . . 3.94 70.57 22 5.19 No 23 0.24 No 0 0 No -24 0.62 No 45 59.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75490682 - NM_001040108 MLH3 0 . . . 7.7 87.51 17 5.29 No 10 0.07 No 0 0 No -21 0.58 No 48 97.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69083513 + NM_133509 RAD51B 0 . . . 5.81 81.8 20 4.6 No 42 0.88 Yes 0 0 No -19 0.5 No 30 97.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68845142 + NM_133509 RAD51B 0 . . . 3.78 76.4 33 7.67 Yes 9 1.15 Yes 0 0 No -32 0.89 Yes 45 56.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59921217 - NM_032043 BRIP1 0 . . . 2.87 64.61 22 5.19 No 12 0.41 No 0 0 No -21 0.6 No 43 40.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108154787 + NM_000051 ATM 0 . . . 7.12 68.57 20 4.58 No 20 1.27 Yes 0 0 No -23 0.92 Yes 38 66.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68745077 + NM_133509 RAD51B 0 . . . 0.34 69.35 49 7.21 Yes 8 1.12 Yes 0 0 No -48 0.36 No 44 92.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89635676 + NM_000314 PTEN 0 . . . 0.81 66.81 30 5.56 Yes 56 0.2 No 0 0 No -17 0.43 No 37 76.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59901298 - NM_032043 BRIP1 0 . . . 3.79 89.05 16 4.39 No 62 1.46 Yes 0 0 No -43 0.42 No 46 49.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56813343 + NM_058216 RAD51C 0 . . . 3.11 73.24 34 5.66 Yes 28 1.52 Yes 0 0 No -33 0.76 Yes 30 80.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41237370 - NM_007294 BRCA1 0 . . . 2.82 0 12 3.93 No 23 1.18 Yes 0 0 No -21 0.59 No 35 85.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37083542 + NM_000249 MLH1 0 . . . 0.71 80.42 13 4.12 No 3 2.18 Yes 0 0 No -23 0.4 No 46 94.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190708744 + NM_000534 PMS1 0 . . . 3.43 74.74 21 5.19 No 72 0.14 No 0 0 No -20 0.7 Yes 49 66.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90944673 - NM_002485 NBN 0 . . . 2.95 73.27 36 5.43 No 22 1.18 Yes 0 0 No -25 0.68 Yes 36 79.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32887739 + NM_000059 BRCA2 0 . . . 5.92 82.31 15 5.29 No 58 0.42 No 0 0 No -17 0.49 No 55 47.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68815630 + NM_004360 CDH1 0 . . . 2.95 74.06 15 5.19 No 3 0.94 Yes 0 0 No -18 0.47 No 51 55.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32901265 + NM_000059 BRCA2 0 . . . 3.16 0 22 4.22 No 43 0.16 No 0 0 No -21 0.62 No 40 44.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41211462 - NM_007294 BRCA1 0 . . . 5.36 87.46 13 4.01 No 12 1.03 Yes 0 0 No -22 0.68 Yes 46 84.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108240706 + NM_000051 ATM 0 . . . 2.12 64.31 22 4.1 No 28 1.54 Yes 0 0 No -21 0.48 No 42 48.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69022806 + NM_133509 RAD51B 0 . . . 3.56 80.16 23 5.39 No 33 0.38 No 0 0 No -22 0.85 Yes 52 69.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89726547 + NM_000314 PTEN 0 . . . 2.79 75.78 29 5.74 Yes 61 0.78 Yes 0 0 No -32 0.44 No 47 42.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190708007 + NM_000534 PMS1 0 . . . 3.12 0 34 6.99 Yes 23 1.58 Yes 0 0 No -33 0.87 Yes 40 59.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94172946 - NM_005591 MRE11 0 . . . 7.64 90.93 22 5 No 48 1.77 Yes 0 0 No -21 0.81 Yes 48 62.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108093424 + NM_000051 ATM 0 . . . 2.29 80.04 27 5.74 Yes 46 0.97 Yes 0 0 No -26 0.81 Yes 46 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89672882 + NM_000314 PTEN 0 . . . 0.54 58.31 20 5.1 No 70 0.87 Yes 0 0 No -40 0.4 No 47 35.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21973464 - NM_000077 CDKN2A 0 . . . 0.29 56.18 27 7.54 Yes 76 -2.99 No 0 0 No -26 0.77 Yes 38 88.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47689516 + NM_000251 MSH2 0 . . . 2.56 0 30 4.62 No 39 -1.54 No 0 0 No -35 0.53 No 40 62.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47739879 + NM_000251 MSH2 0 . . . 7.25 89.69 29 7.41 Yes 55 1.29 Yes 0 0 No -28 0.48 No 33 68.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68954123 + NM_133509 RAD51B 0 . . . 1.59 88.76 37 5.78 Yes 49 -1 No 0 0 No -36 0.36 No 48 81.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131923780 + NM_005732 RAD50 0 . . . 3.96 84.31 16 6.01 Yes 62 -1.81 No 0 0 No -33 0.3 No 51 47.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69007415 + NM_133509 RAD51B 0 . . . 4.64 70.61 15 5.2 No 9 0.81 Yes 0 0 No -45 0.25 No 49 86.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37052223 + NM_000249 MLH1 0 . . . 7.28 85.02 21 4.79 No 15 1.54 Yes 0 0 No -20 0.77 Yes 43 96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32950414 + NM_000059 BRCA2 0 . . . 6.89 75.81 26 5.21 No -2 0.23 No 0 0 No -25 0.59 No 44 94.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37092282 + NM_000249 MLH1 0 . . . 5.56 76.51 30 4.98 No 6 0.42 No 0 0 No -24 0.32 No 52 64.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33441680 - NM_002878 RAD51D 0 . . . 2.96 0 22 4.56 No 39 0.49 No 0 0 No -21 0.59 No 19 60.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68982519 + NM_133509 RAD51B 0 . . . 3.01 0 17 4.1 No 48 1.68 Yes 0 0 No -25 0.44 No 11 52.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131902015 + NM_005732 RAD50 0 . . . 5.77 81.56 15 5.48 No 73 -4.09 No 0 0 No -23 0.5 No 46 43.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152349735 - NM_005431 XRCC2 0 . . . 1.25 0 35 6.46 Yes 3 0.46 No 0 0 No -20 0.52 No 55 82.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68323461 + NM_133509 RAD51B 0 . . . 4.04 81.74 33 6.24 Yes 58 1.37 Yes 0 0 No -32 0.84 Yes 50 55.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68996014 + NM_133509 RAD51B 0 . . . 1.97 0 37 4.37 No 58 1.3 Yes 0 0 No -31 0.66 Yes 43 95.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37046217 + NM_000249 MLH1 0 . . . 4.94 79.83 31 5.5 No 66 0.73 No 0 0 No -34 0.82 Yes 47 69.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75498416 - NM_001040108 MLH3 0 . . . 1.15 83.33 21 5.1 No 76 1.49 Yes 0 0 No -20 0.77 Yes 50 56.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59817750 - NM_032043 BRIP1 0 . . . 0.56 61.22 11 5.83 Yes 69 0.03 No 0 0 No -27 0.87 Yes 44 71.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89645619 + NM_000314 PTEN 0 . . . 8.7 84.79 19 5.82 Yes 22 0.17 No 0 0 No -19 0.31 No 45 67.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29138371 - NM_001005735 CHEK2 0 . . . 2.79 0 29 5.92 Yes 73 1.82 Yes 0 0 No -28 0.77 Yes 39 54.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190707252 + NM_000534 PMS1 0 . . . 0.88 61.42 11 3.6 No 70 -4.47 No 0 0 No -10 0.51 No 50 82.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21991321 - NM_000077 CDKN2A 0 . . . 0.83 55.36 52 5.5 No 1 0.95 Yes 0 0 No -35 0.66 No 48 30.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89651119 + NM_000314 PTEN 0 . . . 0.83 0 13 5.1 No 11 0.89 Yes 0 0 No -25 0.7 Yes 43 42.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215634438 - NM_000465 BARD1 0 . . . 3.13 80.08 21 7.17 Yes 67 -0.92 No 0 0 No -20 0.69 Yes 14 50.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90972069 - NM_002485 NBN 0 . . . 8.3 84.03 22 4.71 No -3 0.65 No 0 0 No -24 0.43 No 51 58.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68504505 + NM_133509 RAD51B 0 . . . 0.96 68.91 31 6.87 Yes 51 1.33 Yes 0 0 No -30 0.67 Yes 16 78.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68347133 + NM_133509 RAD51B 0 . . . 1.24 73.62 26 5.2 No 71 1.07 Yes 0 0 No -25 0.45 No 47 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68787635 + NM_004360 CDH1 0 . . . 1.57 68.53 26 5.11 No 63 1.09 Yes 0 0 No -25 0.81 Yes 49 34.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68292911 + NM_133509 RAD51B 0 . . . 1.49 68.48 25 4.94 No 30 0.16 No 0 0 No -24 0.7 Yes 43 78.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68846271 + NM_004360 CDH1 0 . . . 4.76 76.93 39 7.45 Yes 34 0.72 No 0 0 No -33 0.52 No 40 97.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108122833 + NM_000051 ATM 0 . . . 4.66 83.25 19 4.8 No 56 -1.48 No 0 0 No -19 0.64 No 40 57.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84400338 - NM_139076 FAM175A 0 . . . 4.26 76.04 58 7.38 Yes 44 -1.87 No 0 0 No -31 0.79 Yes 54 53.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108221539 + NM_000051 ATM 0 . . . 2.05 0 20 3.78 No 62 -5.9 No 0 0 No -19 0.49 No 54 54.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94159733 - NM_005591 MRE11 0 . . . 1.66 0 17 6.2 Yes 0 0.51 No 0 0 No -26 0.82 Yes 28 75.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68359713 + NM_133509 RAD51B 0 . . . 3.37 74.14 98 10.85 Yes 40 1.15 Yes 0 0 No -22 0.81 Yes 39 90.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69085593 + NM_133509 RAD51B 0 . . . 9.03 74.09 23 5.39 No 61 0.56 No 0 0 No -22 0.64 No 38 77.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68952537 + NM_133509 RAD51B 0 . . . 7.14 71.5 22 5.74 Yes 76 -3.6 No 0 0 No -21 0.88 Yes 42 86.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108119210 + NM_000051 ATM 0 . . . 6.64 79.86 35 6.04 Yes 51 1.23 Yes 0 0 No -34 0.59 No 37 83.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68703453 + NM_133509 RAD51B 0 . . . 6.44 81.34 52 7.57 Yes -1 1.45 Yes 0 0 No -37 0.67 Yes 48 57.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131968898 + NM_005732 RAD50 0 . . . 2.16 66.46 16 5.25 No 25 1.08 Yes 0 0 No -26 0.56 No 33 88.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68824284 + NM_133509 RAD51B 0 . . . 2.46 75.69 44 6.71 Yes 55 1.26 Yes 0 0 No -44 0.52 No 46 69.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68304131 + NM_133509 RAD51B 0 . . . 5.02 79.46 26 5.1 No 48 1.08 Yes 0 0 No -25 0.76 Yes 47 64.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94167092 - NM_005591 MRE11 0 . . . 4.47 81.22 20 5.09 No 72 -4.42 No 0 0 No -22 0.6 No 51 43.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32969163 + NM_000059 BRCA2 0 . . . 2.33 56.12 18 7.12 Yes 3 -1.81 No 0 0 No -24 0.79 Yes 48 49.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59911471 - NM_032043 BRIP1 0 . . . 5.79 87.3 27 6.63 Yes 7 1.08 Yes 0 0 No -26 0.7 Yes 31 41.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29117856 - NM_001005735 CHEK2 0 . . . 8.35 79.64 19 3.73 No 47 0.27 No 0 0 No -23 0.64 No 42 62.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37056086 + NM_000249 MLH1 0 . . . 1.06 68.87 10 4 No 53 0.93 Yes 0 0 No -18 0.74 Yes 53 93.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68465745 + NM_133509 RAD51B 0 . . . 3.48 65.65 28 6.01 Yes 9 1.3 Yes 0 0 No -21 0.72 Yes 42 43.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32965390 + NM_000059 BRCA2 0 . . . 1 0 26 4.91 No 72 0.21 No 0 0 No -25 0.75 Yes 55 91.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75484143 - NM_001040108 MLH3 0 . . . 2.78 84.22 30 5.66 Yes 76 1.48 Yes 0 0 No -57 0.57 No 50 57.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68611768 + NM_133509 RAD51B 0 . . . 4.07 73.51 27 5.27 No 44 1.66 Yes 0 0 No -29 0.35 No 37 59.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68293728 + NM_133509 RAD51B 0 . . . 2.73 0 28 6.61 Yes 38 -1.83 No 0 0 No -21 0.8 Yes 41 61.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32890241 + NM_000059 BRCA2 0 . . . 0.33 69.15 22 4.82 No 2 0.53 No 0 0 No -19 0.33 No 19 60.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68817843 + NM_004360 CDH1 0 . . . 2.41 68.34 13 5.46 No 23 1.57 Yes 0 0 No -32 0.28 No 40 56.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75495030 - NM_001040108 MLH3 0 . . . 1.33 55.01 14 5.29 No 65 -5.84 No 0 0 No -18 0.78 Yes 45 65.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68344059 + NM_133509 RAD51B 0 . . . 2.4 68.44 25 4.96 No 44 0.52 No 0 0 No -24 0.86 Yes 47 91.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7568512 - NM_000546 TP53 0 . . . 3.63 81.06 28 4.14 No 32 0.56 No 0 0 No -27 0.87 Yes 15 50.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94205749 - NM_005591 MRE11 0 . . . 0.66 0 30 5.48 No 67 0.19 No 0 0 No -29 0.83 Yes 38 80.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41269611 - NM_007294 BRCA1 0 . . . 0.75 68.26 15 4.36 No 52 0.04 No 0 0 No -32 0.6 No 48 71.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32946541 + NM_000059 BRCA2 0 . . . 3.2 80.13 17 5.29 No 64 0.85 Yes 0 0 No -25 0.46 No 58 42.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68536660 + NM_133509 RAD51B 0 . . . 4.81 75.09 28 5.34 No 44 1 Yes 0 0 No -26 0.39 No 40 61.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29102046 - NM_001005735 CHEK2 0 . . . 2.73 83.05 25 7.8 Yes 3 1.09 Yes 0 0 No -24 0.71 Yes 47 58.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89626117 + NM_000314 PTEN 0 . . . 0.76 65.98 32 6.16 Yes 31 0.08 No 0 0 No -31 0.84 Yes 46 65.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68673715 + NM_133509 RAD51B 0 . . . 1.85 76.72 18 7.87 Yes 31 1.23 Yes 0 0 No -28 0.73 Yes 27 80.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68797230 + NM_133509 RAD51B 0 . . . 2.11 79.9 18 5.69 Yes 29 0.56 No 0 0 No -22 0.56 No 48 90.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37085231 + NM_000249 MLH1 0 . . . 0.34 77.08 48 5.86 Yes 39 1.08 Yes 0 0 No -21 0.33 No 19 94.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68663226 + NM_133509 RAD51B 0 . . . 0.98 57.19 16 5.55 No 46 1.8 Yes 0 0 No -24 0.58 No 38 95.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47767173 + NM_000251 MSH2 0 . . . 3.47 68.08 37 6.87 Yes 63 0.9 Yes 0 0 No -24 0.7 Yes 48 66.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215675308 - NM_000465 BARD1 0 . . . 1.28 65.85 20 4.8 No 32 0.97 Yes 0 0 No -19 0.76 Yes 26 82.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7578022 - NM_000546 TP53 0 . . . 3.74 73.55 22 4.58 No 43 1.13 Yes 0 0 No -20 0.31 No 42 49.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68358473 + NM_133509 RAD51B 0 . . . 2.92 61.93 21 4.84 No 67 0.45 No 0 0 No -21 0.53 No 53 73.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68740421 + NM_133509 RAD51B 0 . . . 9.05 86.46 23 6.93 Yes 35 0.56 No 0 0 No -22 0.96 Yes 47 84.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68990391 + NM_133509 RAD51B 0 . . . 2.88 70.62 34 5.66 Yes 9 0.95 Yes 0 0 No -33 0.55 No 35 51.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215658819 - NM_000465 BARD1 0 . . . 3.16 75.88 30 7.65 Yes -2 1.1 Yes 0 0 No -29 0.55 No 49 57.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59906064 - NM_032043 BRIP1 0 . . . 8.19 86.27 38 5.08 No -3 1.46 Yes 0 0 No -20 0.67 Yes 49 30.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68770468 + NM_133509 RAD51B 0 . . . 0.51 79.01 24 5 No 71 -2.55 No 0 0 No -23 0.83 Yes 41 61.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215674922 - NM_000465 BARD1 0 . . . 6.23 76.98 16 5.27 No 18 0.02 No 0 0 No -55 0.5 No 40 85.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190713772 + NM_000534 PMS1 0 . . . 1.73 75.17 24 5.25 No 65 -2.39 No 0 0 No -24 0.73 Yes 49 64.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47685080 + NM_000251 MSH2 0 . . . 6.89 87.63 22 5.29 No 36 1.29 Yes 0 0 No -21 0.82 Yes 22 78.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89656879 + NM_000314 PTEN 0 . . . 0.2 75.62 16 5.38 No 29 1.49 Yes 0 0 No -15 0.64 No 54 54.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68938177 + NM_133509 RAD51B 0 . . . 1.34 0 26 5.01 No 71 -6.79 No 0 0 No -25 0.86 Yes 57 56.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152362332 - NM_005431 XRCC2 0 . . . 2.21 78.4 38 7.67 Yes 8 0.02 No 0 0 No -20 0.6 No 50 93.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108126778 + NM_000051 ATM 0 . . . 4.69 84.15 22 5.73 Yes 63 0.46 No 0 0 No -21 0.67 Yes 46 78.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41278671 - NM_007294 BRCA1 0 . . . 5.11 77.22 27 5.37 No 9 0.86 Yes 0 0 No -26 0.64 No 39 55.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29135576 - NM_001005735 CHEK2 0 . . . 0.05 84.22 16 5.2 No 33 1.61 Yes 0 0 No -39 0.74 Yes 50 62.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215641060 - NM_000465 BARD1 0 . . . 3.02 62.49 22 4.81 No 41 1.15 Yes 0 0 No -22 0.55 No 17 70.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59819612 - NM_032043 BRIP1 0 . . . 1.48 70.26 37 6.58 Yes 1 1.41 Yes 0 0 No -36 0.62 No 46 47.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90992160 - NM_002485 NBN 0 . . . 1.5 0 13 5.61 Yes 3 -1.96 No 0 0 No -21 0.39 No 55 44.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32954645 + NM_000059 BRCA2 0 . . . 7.81 96.4 23 4.69 No 30 0.63 No 0 0 No -31 0.3 No 41 77.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69024477 + NM_133509 RAD51B 0 . . . 5.25 76.72 71 7.3 Yes 21 -2.18 No 0 0 No -21 0.86 Yes 49 39.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84399426 - NM_139076 FAM175A 0 . . . 1.27 0 27 5.45 No 31 1.51 Yes 0 0 No -26 0.79 Yes 27 79.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68659612 + NM_133509 RAD51B 0 . . . 4.86 86.75 20 6.91 Yes 3 0.41 No 0 0 No -19 0.79 Yes 45 58.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59760886 - NM_032043 BRIP1 0 . . . 1.88 74.25 18 4.57 No 7 0.3 No 0 0 No -26 0.83 Yes 51 57.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68766330 + NM_133509 RAD51B 0 . . . 7.33 90.91 21 4.48 No 55 -4.33 No 0 0 No -25 0.69 Yes 42 90.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68858063 + NM_004360 CDH1 0 . . . 0.52 68.06 15 4.79 No 60 0.27 No 0 0 No -53 0.52 No 46 56.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59841062 - NM_032043 BRIP1 0 . . . 4.02 77.25 18 5.53 No 61 -3.51 No 0 0 No -27 0.22 No 48 46.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68798537 + NM_133509 RAD51B 0 . . . 4.7 81.99 21 4.3 No 42 0.9 Yes 0 0 No -20 0.9 Yes 46 76.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29096470 - NM_001005735 CHEK2 0 . . . 1.2 74.68 29 4.17 No 21 1.04 Yes 0 0 No -29 0.5 No 37 80.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40990408 + NM_001164269 RAD51 0 . . . 1.79 84.41 21 6.16 Yes 50 0.79 Yes 0 0 No -29 0.54 No 41 49.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190693871 + NM_000534 PMS1 0 . . . 7.91 76.04 42 8.06 Yes 16 0.91 Yes 0 0 No -41 0.5 No 42 66.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190744330 + NM_000534 PMS1 0 . . . 1.28 0 10 4 No 72 -2.1 No 0 0 No -33 0.86 Yes 37 32.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41235730 - NM_007294 BRCA1 0 . . . 2.71 75.33 29 4.82 No 4 0.37 No 0 0 No -29 0.84 Yes 43 73.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68386533 + NM_133509 RAD51B 0 . . . 5.25 80.7 55 7.14 Yes 51 0.27 No 0 0 No -26 0.63 No 28 68.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68976611 + NM_133509 RAD51B 0 . . . 6.83 73.38 19 5 No 1 1.43 Yes 0 0 No -23 0.54 No 35 77.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105198297 + NM_021930 RINT1 0 . . . 0.73 63.52 20 4.99 No 71 -5.52 No 0 0 No -19 0.24 No 51 70.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108169354 + NM_000051 ATM 0 . . . 0.85 0 31 3.94 No 10 1.1 Yes 0 0 No -26 0.8 Yes 24 60.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32944014 + NM_000059 BRCA2 0 . . . 2.38 69.2 25 4.63 No 63 1.37 Yes 0 0 No -24 0.3 No 49 32.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215600265 - NM_000465 BARD1 0 . . . 0.56 62.09 22 5.57 Yes 26 0.61 No 0 0 No -26 0.34 No 39 58.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108195716 + NM_000051 ATM 0 . . . 3.78 82.07 29 5.91 Yes 53 1.67 Yes 0 0 No -28 0.74 Yes 45 65.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68392616 + NM_133509 RAD51B 0 . . . 6.78 86.88 13 5.57 Yes 3 1.07 Yes 0 0 No -24 0.59 No 48 73.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32904871 + NM_000059 BRCA2 0 . . . 3.27 77.28 28 6.16 Yes 33 0.61 No 0 0 No -27 0.81 Yes 48 67.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68748544 + NM_133509 RAD51B 0 . . . 8.5 77.98 18 4.9 No 2 1.8 Yes 0 0 No -21 0.4 No 45 61.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90979107 - NM_002485 NBN 0 . . . 2.9 73.02 21 4.01 No 75 1.78 Yes 0 0 No -26 0.89 Yes 44 65.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29112619 - NM_001005735 CHEK2 0 . . . 2.92 69.51 29 5.31 No 54 1.15 Yes 0 0 No -28 0.63 No 46 56.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32948331 + NM_000059 BRCA2 0 . . . 9.74 88.87 46 6.52 Yes NA NA NA 0 0 No -23 0.61 No 47 56.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190737015 + NM_000534 PMS1 0 . . . 5.13 79.22 30 6.49 Yes 33 -1.38 No 0 0 No -29 0.54 No 46 56.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131906021 + NM_005732 RAD50 0 . . . 0.57 61.68 23 3.5 No -3 0.15 No 0 0 No -58 0.57 No 61 75.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68286865 + NM_133509 RAD51B 0 . . . 9.12 85.19 21 4.79 No 24 1.45 Yes 0 0 No -20 0.8 Yes 34 79.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215604614 - NM_000465 BARD1 0 . . . 0.36 63.56 32 5.74 Yes 10 1.16 Yes 0 0 No -31 0.36 No 48 57.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69073805 + NM_133509 RAD51B 0 . . . 6.57 80.57 16 4.69 No -2 0.56 No 0 0 No -42 0.54 No 48 74.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37079625 + NM_000249 MLH1 0 . . . 2.68 74.33 15 5.29 No 30 1.23 Yes 0 0 No -43 0.89 Yes 16 43.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215627741 - NM_000465 BARD1 0 . . . 4.75 75.57 21 5.66 Yes 76 -6.15 No 0 0 No -20 0.81 Yes 48 58.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32892313 + NM_000059 BRCA2 0 . . . 1.7 66.88 10 4.87 No 74 -6.53 No 0 0 No -40 0.26 No 47 55.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510392 - NM_001040108 MLH3 0 . . . 6.93 83.06 25 5.18 No 32 0.96 Yes 0 0 No -24 0.52 No 49 73.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108096076 + NM_000051 ATM 0 . . . 3.05 73.96 20 5.74 Yes 56 0.64 No 0 0 No -19 0.65 No 44 67.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52443269 - NM_004656 BAP1 0 . . . 6.07 88.44 17 5.39 No 61 1.19 Yes 0 0 No -25 0.48 No 50 88.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41227509 - NM_007294 BRCA1 0 . . . 2.07 75.21 23 6.4 Yes 34 1.7 Yes 0 0 No -22 0.59 No 48 43.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131906346 + NM_005732 RAD50 0 . . . 5.52 73.71 55 7.25 Yes 26 -0.97 No 0 0 No -37 0.74 Yes 42 43.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56810558 + NM_058216 RAD51C 0 . . . 4.31 85.02 16 4.69 No 4 1.2 Yes 0 0 No -19 0.5 No 43 54.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104178388 - NM_001100119 XRCC3 0 . . . 5.15 79.89 24 6.16 Yes 71 1.01 Yes 0 0 No -23 0.88 Yes 50 91.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68923059 + NM_133509 RAD51B 0 . . . 6.56 89.51 19 4.77 No 42 0.7 No 0 0 No -23 0.74 Yes 49 50.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32906819 + NM_000059 BRCA2 0 . . . 8.12 85.64 28 5.38 No -2 1.19 Yes 0 0 No -27 0.61 No 46 65.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68719549 + NM_133509 RAD51B 0 . . . 3 72.46 23 6.5 Yes 8 1.58 Yes 0 0 No -23 0.77 Yes 50 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37034904 + NM_000249 MLH1 0 . . . 1.94 66.85 18 5.99 Yes 62 -5.15 No 0 0 No -28 0.32 No 48 53.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68696220 + NM_133509 RAD51B 0 . . . 5.98 86.78 18 4.29 No 4 1.01 Yes 0 0 No -36 0.44 No 50 89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68496664 + NM_133509 RAD51B 0 . . . 4.22 73.79 23 6.05 Yes 70 0.74 No 0 0 No -22 0.71 Yes 47 51.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59925058 - NM_032043 BRIP1 0 . . . 1.5 64.08 34 5.89 Yes 34 -4 No 0 0 No -33 0.86 Yes 38 66.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68637847 + NM_133509 RAD51B 0 . . . 0.45 78.87 15 5.57 Yes 8 0.79 Yes 0 0 No -14 0.37 No 50 89.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68460073 + NM_133509 RAD51B 0 . . . 3.73 76.75 60 7.78 Yes 26 2.05 Yes 0 0 No -27 0.41 No 32 88.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68512254 + NM_133509 RAD51B 0 . . . 6.16 88.61 21 5.04 No -3 0.88 Yes 0 0 No -20 0.59 No 37 77.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68847366 + NM_004360 CDH1 0 . . . 2.41 64.8 34 6.11 Yes 21 0.13 No 0 0 No -33 0.7 Yes 44 46.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68458211 + NM_133509 RAD51B 0 . . . 2.96 71.07 20 3.98 No 38 0.19 No 0 0 No -19 0.65 No 39 74.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33427797 - NM_002878 RAD51D 0 . . . 1.42 75.83 16 4.72 No 67 -1.19 No 0 0 No -20 0.52 No 44 75.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48029939 + NM_000179 MSH6 0 . . . 4.86 80.47 35 7.35 Yes 47 0.61 No 0 0 No -34 0.66 No 43 77.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94160240 - NM_005591 MRE11 0 . . . 9.87 84.62 17 5.74 Yes 20 1.18 Yes 0 0 No -27 0.4 No 38 85.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47646012 + NM_000251 MSH2 0 . . . 5.6 78.87 24 4.62 No 3 0.69 No 0 0 No -26 0.76 Yes 38 49.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41239886 - NM_007294 BRCA1 0 . . . 1.46 66.11 23 4.96 No 69 0.14 No 0 0 No -27 0.6 No 52 82.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68670593 + NM_133509 RAD51B 0 . . . 9.61 91.59 13 5.29 No 10 2.09 Yes 0 0 No -23 0.39 No 48 94.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94214826 - NM_005591 MRE11 0 . . . 5.45 74.15 31 5.53 No 5 0.48 No 0 0 No -30 0.81 Yes 44 76.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56788313 + NM_058216 RAD51C 0 . . . 4.99 75.02 27 5.74 Yes 69 1.23 Yes 0 0 No -20 0.32 No 39 88.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21980471 - NM_000077 CDKN2A 0 . . . 4.54 73.44 14 4.36 No 32 1.14 Yes 0 0 No -23 0.25 No 41 66.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68803748 + NM_133509 RAD51B 0 . . . 2.49 69.75 9 3.76 No 16 1.3 Yes 0 0 No -34 0.86 Yes 42 94.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68658682 + NM_133509 RAD51B 0 . . . 1.77 74.34 22 6.39 Yes 66 -5.06 No 0 0 No -21 0.7 Yes 44 88.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68501961 + NM_133509 RAD51B 0 . . . 3.15 77.74 24 4.99 No 42 2.2 Yes 0 0 No -23 0.89 Yes 16 80.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108140351 + NM_000051 ATM 0 . . . 0.09 0 29 6.7 Yes 16 1.34 Yes 0 0 No -28 0.77 Yes 42 51.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90996519 - NM_002485 NBN 0 . . . 3.72 73.25 10 5.2 No 40 -2.89 No 0 0 No -20 0.64 No 47 79.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89724791 + NM_000314 PTEN 0 . . . 2.76 87.95 41 6.63 Yes 71 -3.77 No 0 0 No -25 0.89 Yes 48 53.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131973501 + NM_005732 RAD50 0 . . . 5.37 88.39 38 7.97 Yes 25 0.79 Yes 0 0 No -37 0.92 Yes 33 77.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47728131 + NM_000251 MSH2 0 . . . 1.89 72.26 28 5.38 No 29 1.16 Yes 0 0 No -27 0.42 No 29 59.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68668741 + NM_133509 RAD51B 0 . . . 1.76 71.51 14 5.25 No 52 -4.18 No 0 0 No -54 0.31 No 47 16.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108171090 + NM_000051 ATM 0 . . . 3.69 73.29 21 3.88 No 30 0.68 No 0 0 No -17 0.52 No 45 74.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69041744 + NM_133509 RAD51B 0 . . . 1.81 68.65 22 4.78 No 20 1.7 Yes 0 0 No -21 0.68 Yes 38 88.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47633411 + NM_000251 MSH2 0 . . . 0.01 68.84 53 7.97 Yes 52 0.03 No 0 0 No -52 0.34 No 48 68.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47776148 + NM_000251 MSH2 0 . . . 4.68 77.06 25 5.57 Yes 75 -2.78 No 0 0 No -24 0.75 Yes 43 70.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94162363 - NM_005591 MRE11 0 . . . 3.21 59.11 17 4.24 No 44 0.77 No 0 0 No -23 0.89 Yes 41 62.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59899817 - NM_032043 BRIP1 0 . . . 6.25 87.83 24 3.59 No 47 0.76 No 0 0 No -23 0.96 Yes 27 69.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68856776 + NM_133509 RAD51B 0 . . . 6.86 88.71 29 5.88 Yes 46 0.59 No 0 0 No -29 0.65 No 49 65.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68820806 + NM_004360 CDH1 0 . . . 6.35 84.5 37 6.96 Yes 70 0.21 No 0 0 No -32 0.65 No 33 83.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68479516 + NM_133509 RAD51B 0 . . . 6.59 82.42 20 4.89 No 24 1.5 Yes 0 0 No -22 0.7 Yes 45 79.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105192395 + NM_021930 RINT1 0 . . . 5.26 71.99 18 5.27 No 49 0.47 No 0 0 No -25 0.37 No 43 71.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90992182 - NM_002485 NBN 0 . . . 0.17 79.89 29 5.47 No 59 -1.73 No 0 0 No -28 0.33 No 48 59.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89719736 + NM_000314 PTEN 0 . . . 1.56 84.75 37 7.2 Yes 68 -4.04 No 0 0 No -36 0.38 No 50 61.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190733203 + NM_000534 PMS1 0 . . . 0.05 66.87 10 4 No 57 1.44 Yes 0 0 No -28 0.46 No 60 16.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47654070 + NM_000251 MSH2 0 . . . 6.32 80.03 22 5.82 Yes 8 0.37 No 0 0 No -21 0.77 Yes 46 74.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108151016 + NM_000051 ATM 0 . . . 1.89 70.52 23 5.5 No 70 -5.19 No 0 0 No -28 0.64 No 19 61.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68377416 + NM_133509 RAD51B 0 . . . 1.56 69.85 17 5.38 No 3 0.35 No 0 0 No -22 0.37 No 46 41.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68615892 + NM_133509 RAD51B 0 . . . 6.76 81.9 36 8.26 Yes 34 0.12 No 0 0 No -35 0.51 No 40 46.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69054278 + NM_133509 RAD51B 0 . . . 6.35 77.31 20 4.8 No 10 1.54 Yes 0 0 No -20 0.58 No 48 76.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94227823 - NM_005591 MRE11 0 . . . 4.89 77.29 21 4.52 No 42 -2.52 No 0 0 No -20 0.66 Yes 47 37.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48035661 + NM_000179 MSH6 0 . . . 2.83 78.95 33 4.74 No 3 1.29 Yes 0 0 No -28 0.56 No 19 46.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215630012 - NM_000465 BARD1 0 . . . 4.87 89.78 29 5.83 Yes 63 0.59 No 0 0 No -28 0.55 No 51 60.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215637764 - NM_000465 BARD1 0 . . . 2.18 0 16 4.58 No 3 0.15 No 0 0 No -22 0.64 No 43 49.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69063300 + NM_133509 RAD51B 0 . . . 7.09 78.24 32 6.16 Yes 38 0.82 Yes 0 0 No -32 0.68 Yes 49 90.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32968572 + NM_000059 BRCA2 0 . . . 2.47 73.95 16 4.12 No 62 0.06 No 0 0 No -15 0.52 No 49 73.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104169068 - NM_001100119 XRCC3 0 . . . 1.79 75.62 18 7.81 Yes 8 0.42 No 0 0 No -17 0.49 No 50 82.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89634939 + NM_000314 PTEN 0 . . . 2.54 63.87 23 5.1 No 35 0.22 No 0 0 No -28 0.57 No 43 69.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215607739 - NM_000465 BARD1 0 . . . 5.35 78.34 21 8.1 Yes 3 1.22 Yes 0 0 No -25 0.78 Yes 46 78.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69109268 + NM_133509 RAD51B 0 . . . 5.82 79.29 14 5.41 No 0 1.04 Yes 0 0 No -26 0.81 Yes 45 78.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47804281 + NM_000251 MSH2 0 . . . 4.35 80.74 25 6.26 Yes 6 0.63 No 0 0 No -24 0.86 Yes 52 96.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89723309 + NM_000314 PTEN 0 . . . 2.66 73.85 14 3.91 No -2 0.21 No 0 0 No -17 0.74 Yes 54 48.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68841407 + NM_133509 RAD51B 0 . . . 3.12 71.94 69 6.84 Yes 62 -3.33 No 0 0 No -34 0.5 No 45 70.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29111056 - NM_001005735 CHEK2 0 . . . 0.09 69.67 15 5.74 Yes 38 -3.57 No 0 0 No -26 0.57 No 51 32.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190686405 + NM_000534 PMS1 0 . . . 2.75 67.07 42 6.73 Yes 37 0.61 No 0 0 No -23 0.54 No 54 30.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47695500 + NM_000251 MSH2 0 . . . 7.47 70.47 30 5.52 No 16 0.84 Yes 0 0 No -29 0.57 No 47 75.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90951942 - NM_002485 NBN 0 . . . 9.25 95.45 15 6.4 Yes 61 0.39 No 0 0 No -34 0.56 No 51 69.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190681089 + NM_000534 PMS1 0 . . . 6.67 82.03 16 4.24 No 22 0.92 Yes 0 0 No -33 0.48 No 36 50.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68402267 + NM_133509 RAD51B 0 . . . 6.68 80.84 24 5.1 No 8 0.75 No 0 0 No -19 0.64 No 50 94.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68681938 + NM_133509 RAD51B 0 . . . 6.54 83.35 19 5.28 No 72 1.59 Yes 0 0 No -23 0.91 Yes 53 54.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59912200 - NM_032043 BRIP1 0 . . . 9.42 79.11 24 6.99 Yes 10 1.17 Yes 0 0 No -26 0.51 No 48 76.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37061237 + NM_000249 MLH1 0 . . . 2.07 84.41 19 4.67 No 3 0.89 Yes 0 0 No -18 0.5 No 44 70.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108178743 + NM_000051 ATM 0 . . . 8.62 85.51 31 6.56 Yes 12 0.45 No 0 0 No -30 0.8 Yes 46 62.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69006185 + NM_133509 RAD51B 0 . . . 7.5 83.27 30 6 Yes -4 1.12 Yes 0 0 No -29 0.81 Yes 48 77.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68709959 + NM_133509 RAD51B 0 . . . 8.97 84.78 23 4.69 No 38 1.07 Yes 0 0 No -22 0.45 No 47 63.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37055496 + NM_000249 MLH1 0 . . . 1.44 0 37 6.32 Yes 62 1.64 Yes 0 0 No -36 0.82 Yes 42 47.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152345837 - NM_005431 XRCC2 0 . . . 3.1 71.29 25 5.39 No 16 0.15 No 0 0 No -22 0.74 Yes 46 64.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59908040 - NM_032043 BRIP1 0 . . . 1.44 76.69 33 6.15 Yes 7 0.73 No 0 0 No -28 0.43 No 40 53.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104167274 - NM_001100119 XRCC3 0 . . . 5.43 78.38 9 5.39 No NA NA NA 0 0 No -22 0.62 No 43 68.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68527144 + NM_133509 RAD51B 0 . . . 1.56 0 75 9.67 Yes 31 0.61 No 0 0 No -26 0.16 No 50 65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68663632 + NM_133509 RAD51B 0 . . . 1.61 0 25 6.02 Yes 35 0.35 No 0 0 No -24 0.76 Yes 42 87.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37047480 + NM_000249 MLH1 0 . . . 4.31 71.25 26 5.66 Yes 73 1.68 Yes 0 0 No -25 0.62 No 50 46.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68448161 + NM_133509 RAD51B 0 . . . 3.84 78.63 16 4.69 No 13 0.65 No 0 0 No -48 0.65 No 45 89.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37058652 + NM_000249 MLH1 0 . . . 4.57 83.6 32 5.99 Yes 48 -1.76 No 0 0 No -31 0.5 No 49 68.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152366891 - NM_005431 XRCC2 0 . . . 5.15 74.38 21 5.04 No 51 0.99 Yes 0 0 No -20 0.43 No 50 44.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32970388 + NM_000059 BRCA2 0 . . . 1.82 85.25 26 5.6 Yes 27 0.78 Yes 0 0 No -25 0.88 Yes 31 78.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68977862 + NM_133509 RAD51B 0 . . . 1.97 67.88 74 7.69 Yes 69 0.15 No 0 0 No -56 0.08 No 48 38.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59787931 - NM_032043 BRIP1 0 . . . 2.89 69.2 26 6.32 Yes 10 0.15 No 0 0 No -33 0.54 No 37 76.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68430553 + NM_133509 RAD51B 0 . . . 10.53 91.22 30 5.45 No 37 0.88 Yes 0 0 No -18 0.5 No 50 61.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47704370 + NM_000251 MSH2 0 . . . 7.84 85.69 37 4.79 No 53 1.54 Yes 0 0 No -37 0.6 No 42 92.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37040868 + NM_000249 MLH1 0 . . . 1.5 67.39 28 5.48 No 27 -3.53 No 0 0 No -27 0.55 No 46 83.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94149243 - NM_005591 MRE11 0 . . . 1.17 67.41 20 5.79 Yes 4 0.41 No 0 0 No -23 0.61 No 54 85.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215629372 - NM_000465 BARD1 0 . . . 4.4 78.05 33 5.68 Yes 5 0.81 Yes 0 0 No -21 0.45 No 28 84.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190728864 + NM_000534 PMS1 0 . . . 4.54 71.67 46 6.78 Yes 73 -5.28 No 0 0 No -41 0.58 No 50 65.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52443454 - NM_004656 BAP1 0 . . . 5.63 72.31 46 5.66 Yes 74 -4.63 No 0 0 No -45 0.55 No 45 45.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68572904 + NM_133509 RAD51B 0 . . . 6.1 73.2 29 6.32 Yes 36 0.59 No 0 0 No -28 0.91 Yes 39 65.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68946253 + NM_133509 RAD51B 0 . . . 7.35 80.2 38 4.85 No 0 1.12 Yes 0 0 No -22 0.45 No 45 47.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68782899 + NM_133509 RAD51B 0 . . . 2.67 77.05 25 5.57 Yes 3 0.5 No 0 0 No -24 0.73 Yes 44 55.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59931723 - NM_032043 BRIP1 0 . . . 4.52 82.25 58 7.75 Yes 31 1.17 Yes 0 0 No -26 0.66 No 47 71.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94217911 - NM_005591 MRE11 0 . . . 7.24 76.63 25 6.07 Yes 21 0.66 No 0 0 No -24 0.68 Yes 37 91.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108199156 + NM_000051 ATM 0 . . . 6.21 85.86 19 3.94 No 5 1.37 Yes 0 0 No -24 0.55 No 53 84.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48030073 + NM_000179 MSH6 0 . . . 0.47 83.57 27 4.96 No 38 0.36 No 0 0 No -24 0.61 No 28 73.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41021097 + NM_001164269 RAD51 0 . . . 2.41 73.94 47 7.19 Yes 53 -0.91 No 0 0 No -25 0.44 No 45 65.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68499522 + NM_133509 RAD51B 0 . . . 3.17 90.78 16 4.69 No 29 1.28 Yes 0 0 No -23 0.51 No 29 69.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108149024 + NM_000051 ATM 0 . . . 0.56 60.79 29 4.73 No 59 0.89 Yes 0 0 No -28 0.73 Yes 40 82.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56796153 + NM_058216 RAD51C 0 . . . 5.87 83.11 23 5.2 No 5 0.52 No 0 0 No -22 0.95 Yes 42 77.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68971632 + NM_133509 RAD51B 0 . . . 6.44 82.73 18 4.9 No 38 0.92 Yes 0 0 No -24 0.33 No 42 77.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68544984 + NM_133509 RAD51B 0 . . . 3.08 86.29 22 4.69 No 8 0.67 No 0 0 No -21 0.74 Yes 50 89.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59802961 - NM_032043 BRIP1 0 . . . 3.19 0 23 5 No 4 1 Yes 0 0 No -22 0.92 Yes 53 48.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68939050 + NM_133509 RAD51B 0 . . . 0.13 70.99 16 4.69 No 64 -3.5 No 0 0 No -38 0.25 No 62 33.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68681893 + NM_133509 RAD51B 0 . . . 3.97 72.17 40 5.05 No 27 1.63 Yes 0 0 No -43 0.64 No 44 61.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48016386 + NM_000179 MSH6 0 . . . 4.35 84.49 23 5.39 No 73 0.92 Yes 0 0 No -25 0.88 Yes 47 67.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47725062 + NM_000251 MSH2 0 . . . 0.23 63.14 23 5.32 No 1 0.77 Yes 0 0 No -22 0.92 Yes 57 66.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59939142 - NM_032043 BRIP1 0 . . . 2.29 76.38 47 7.72 Yes 26 0.96 Yes 0 0 No -35 0.4 No 50 79.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68843150 + NM_133509 RAD51B 0 . . . 2.92 73.15 24 7.04 Yes 20 0.49 No 0 0 No -23 0.62 No 50 89.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89624997 + NM_000314 PTEN 0 . . . 4.33 70.86 23 5.39 No 76 -2.18 No 0 0 No -22 0.63 No 52 83.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21978394 - NM_000077 CDKN2A 0 . . . 11.06 89.53 27 5.39 No 67 0.6 No 0 0 No -26 0.78 Yes 44 66.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29097179 - NM_001005735 CHEK2 0 . . . 3.19 74.24 31 5.57 Yes 5 0.16 No 0 0 No -24 0.44 No 35 32.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108152356 + NM_000051 ATM 0 . . . 1.15 71.8 28 5.38 No 62 -6.25 No 0 0 No -25 0.54 No 48 47.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68820579 + NM_133509 RAD51B 0 . . . 2.55 76.67 13 3.95 No 30 0.66 No 0 0 No -17 0.57 No 42 59.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59814556 - NM_032043 BRIP1 0 . . . 5.31 82.01 20 4.51 No 3 0.76 No 0 0 No -26 0.52 No 41 89.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68850843 + NM_004360 CDH1 0 . . . 3.2 75.23 30 4.36 No 69 -6.24 No 0 0 No -29 0.62 No 45 81.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68380801 + NM_133509 RAD51B 0 . . . 6.4 73.4 29 6.04 Yes 16 1.23 Yes 0 0 No -28 0.67 Yes 42 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32914622 + NM_000059 BRCA2 0 . . . 2.75 65.36 24 5.48 No 70 -6.34 No 0 0 No -23 0.59 No 59 26.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32958702 + NM_000059 BRCA2 0 . . . 2.26 78.96 24 4.37 No 13 1.23 Yes 0 0 No -18 0.86 Yes 45 86.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68297778 + NM_133509 RAD51B 0 . . . 2.83 79.69 23 5 No 8 0.6 No 0 0 No -22 0.91 Yes 50 60.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40996741 + NM_001164269 RAD51 0 . . . 4.52 85.02 18 4.58 No 71 0.07 No 0 0 No -17 0.56 No 49 58.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68515274 + NM_133509 RAD51B 0 . . . 5.46 0 36 6.17 Yes 15 0.23 No 0 0 No -39 0.7 Yes 49 54.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68392731 + NM_133509 RAD51B 0 . . . 8.64 88.97 14 4.47 No 8 0.56 No 0 0 No -52 0.82 Yes 47 63.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37094003 + NM_000249 MLH1 0 . . . 2.1 76.63 20 4.69 No 58 -3.88 No 0 0 No -20 0.36 No 43 46.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131892662 + NM_005732 RAD50 0 . . . 1.14 58.62 28 5.81 Yes 36 -2.17 No 0 0 No -27 0.83 Yes 16 28.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47662924 + NM_000251 MSH2 0 . . . 1.96 63.19 18 4.9 No 22 1.61 Yes 0 0 No -34 0.54 No 41 84.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59857405 - NM_032043 BRIP1 0 . . . 1.37 0 42 4.22 No 71 -5.03 No 0 0 No -28 0.52 No 53 37.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497573 + NM_133509 RAD51B 0 . . . 2.48 58.61 24 5.2 No 76 0.37 No 0 0 No -23 0.67 Yes 39 38.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190675245 + NM_000534 PMS1 0 . . . 0.99 73.63 36 3.92 No -1 1.01 Yes 0 0 No -35 0.66 No 54 49.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41249448 - NM_007294 BRCA1 0 . . . 4.01 66.67 59 8.46 Yes 13 1.31 Yes 0 0 No -35 0.66 No 45 78.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56813623 + NM_058216 RAD51C 0 . . . 4.53 84.17 25 5.1 No 14 -1.49 No 0 0 No -24 0.9 Yes 45 59.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68700619 + NM_133509 RAD51B 0 . . . 4.92 74.57 27 5.66 Yes 54 -5.19 No 0 0 No -26 0.88 Yes 44 46.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47647495 + NM_000251 MSH2 0 . . . 1.31 66.95 20 4.96 No 33 -3.45 No 0 0 No -26 0.55 No 47 29.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108109237 + NM_000051 ATM 0 . . . 6.76 74.42 16 6 Yes 39 0.96 Yes 0 0 No -22 0.45 No 43 64.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68894649 + NM_133509 RAD51B 0 . . . 0.55 0 17 3.65 No 73 -5.32 No 0 0 No -20 0.65 No 56 21.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59858713 - NM_032043 BRIP1 0 . . . 0.79 69.66 17 5.2 No 51 1.46 Yes 0 0 No -54 0.52 No 28 70.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47775003 + NM_000251 MSH2 0 . . . 0.59 64.99 35 6.02 Yes 7 0.05 No 0 0 No -34 0.47 No 51 68.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90988801 - NM_002485 NBN 0 . . . 0.62 0 10 4.79 No 3 0.04 No 0 0 No -18 0.65 No 40 72.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68526814 + NM_133509 RAD51B 0 . . . 2.68 72.14 19 3.96 No 0 1.4 Yes 0 0 No -23 0.68 Yes 49 79.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84406813 - NM_139076 FAM175A 0 . . . 6.07 73.65 15 4.22 No 42 0.17 No 0 0 No -28 0.38 No 45 58.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108238836 + NM_000051 ATM 0 . . . 3.93 77.08 17 4.47 No 40 1.15 Yes 0 0 No -16 0.81 Yes 47 77.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215663814 - NM_000465 BARD1 0 . . . 3.52 77.4 13 4.8 No 51 1.2 Yes 0 0 No -20 0.44 No 44 64.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1221372 + NM_000455 STK11 0 . . . 1.66 0 17 4.56 No 33 1.13 Yes 0 0 No -21 0.75 Yes 48 65.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32972613 + NM_000059 BRCA2 0 . . . 5.46 82.76 22 5.29 No 56 -4.46 No 0 0 No -21 0.69 Yes 46 28.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23640859 - NM_024675 PALB2 0 . . . 3.36 75.02 39 7.34 Yes 21 0.85 Yes 0 0 No -27 0.69 Yes 34 65.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90986563 - NM_002485 NBN 0 . . . 7.13 92.23 27 7.4 Yes -1 0.71 No 0 0 No -26 0.37 No 49 59.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68971679 + NM_133509 RAD51B 0 . . . 2.07 69.76 27 5.53 No -4 0.63 No 0 0 No -22 0.86 Yes 47 67.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68938020 + NM_133509 RAD51B 0 . . . 1.66 60.28 18 7.01 Yes 46 -4.18 No 0 0 No -26 0.84 Yes 52 37.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68993619 + NM_133509 RAD51B 0 . . . 4.26 82.71 15 5.35 No 41 -2.23 No 0 0 No -26 0.56 No 43 59.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37084667 + NM_000249 MLH1 0 . . . 0.03 65.09 20 3.65 No 76 -4.41 No 0 0 No -22 0.61 No 49 78.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59781921 - NM_032043 BRIP1 0 . . . 0.06 64.3 22 7.24 Yes 41 0.44 No 0 0 No -21 0.84 Yes 46 71.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68382746 + NM_133509 RAD51B 0 . . . 0.67 69.33 12 4.12 No 75 -5.06 No 0 0 No -33 0.43 No 42 50.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75496917 - NM_001040108 MLH3 0 . . . 0.44 66.69 21 7.29 Yes 6 1.02 Yes 0 0 No -35 0.72 Yes 52 47.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190707862 + NM_000534 PMS1 0 . . . 2.42 84.22 21 5.18 No 33 1.22 Yes 0 0 No -20 0.63 No 45 52.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23636200 - NM_024675 PALB2 0 . . . 1.4 64.25 23 6.78 Yes 64 0.78 Yes 0 0 No -22 0.96 Yes 23 92.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41219840 - NM_007294 BRCA1 0 . . . 2.78 71.66 18 5.28 No 56 0.05 No 0 0 No -18 0.52 No 38 57.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47686801 + NM_000251 MSH2 0 . . . 5.27 86.2 15 3.83 No 9 1.17 Yes 0 0 No -34 0.8 Yes 49 94.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37080178 + NM_000249 MLH1 0 . . . 5.47 83.38 26 5.39 No 57 1.43 Yes 0 0 No -26 0.72 Yes 46 59.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48034336 + NM_000179 MSH6 0 . . . 4.31 82.71 23 5.1 No 14 0.16 No 0 0 No -31 0.29 No 44 59.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68811087 + NM_004360 CDH1 0 . . . 1.37 0 29 5.34 No 9 0.42 No 0 0 No -23 0.45 No 49 47.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68356476 + NM_133509 RAD51B 0 . . . 3.79 70.89 25 6.45 Yes 39 -4.23 No 0 0 No -24 0.55 No 45 84.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68712300 + NM_133509 RAD51B 0 . . . 5.07 78.28 22 4.9 No 23 0.71 No 0 0 No -25 0.87 Yes 35 66.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68496799 + NM_133509 RAD51B 0 . . . 2.73 71.74 29 5.27 No 72 0.35 No 0 0 No -28 0.51 No 48 70.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190726609 + NM_000534 PMS1 0 . . . 6.68 90.76 15 5.14 No 3 0.8 Yes 0 0 No -34 0.64 No 41 58.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68819457 + NM_004360 CDH1 0 . . . 4.15 78.24 25 5.29 No 54 1.29 Yes 0 0 No -24 0.92 Yes 52 59.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108112497 + NM_000051 ATM 0 . . . 2.79 84.41 15 5.39 No 76 1.58 Yes 0 0 No -24 0.5 No 27 21.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68665167 + NM_133509 RAD51B 0 . . . 6.61 67.92 29 6.23 Yes 55 1.21 Yes 0 0 No -28 0.74 Yes 42 38.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68714314 + NM_133509 RAD51B 0 . . . 1.17 71.02 18 5.85 Yes 17 -3.51 No 0 0 No -27 0.9 Yes 51 41.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885006 - NM_032043 BRIP1 0 . . . 1.41 0 15 4.42 No 47 0.74 No 0 0 No -23 0.53 No 36 55.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152345700 - NM_005431 XRCC2 0 . . . 2.85 0 29 7.68 Yes 71 0.3 No 0 0 No -28 0.94 Yes 48 62.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6021365 - NM_000535 PMS2 0 . . . 2.09 69.24 37 5.56 Yes 2 0.91 Yes 0 0 No -31 0.53 No 47 93.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68577368 + NM_133509 RAD51B 0 . . . 1.2 79.6 42 8.66 Yes 22 0.91 Yes 0 0 No -41 0.24 No 46 39.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59801241 - NM_032043 BRIP1 0 . . . 3.37 75.54 33 7.48 Yes -1 0.18 No 0 0 No -32 0.73 Yes 44 71.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68647674 + NM_133509 RAD51B 0 . . . 4.1 71.65 24 5.99 Yes 50 0.46 No 0 0 No -23 0.44 No 45 51.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32959547 + NM_000059 BRCA2 0 . . . 5.31 77.15 13 4.8 No 50 -4.27 No 0 0 No -47 0.38 No 45 44.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105202313 + NM_021930 RINT1 0 . . . 2.41 62.99 16 5.57 Yes 64 1.39 Yes 0 0 No -15 0.44 No 55 45.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68811655 + NM_004360 CDH1 0 . . . 2.66 80.15 46 6.21 Yes 32 1.2 Yes 0 0 No -28 0.75 Yes 26 43.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190674161 + NM_000534 PMS1 0 . . . 7.11 80.31 29 5.85 Yes 66 0.71 No 0 0 No -28 0.77 Yes 41 45.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41009187 + NM_001164269 RAD51 0 . . . 7.38 80.41 31 5.74 Yes -1 -0.96 No 0 0 No -30 0.86 Yes 25 44.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68421380 + NM_133509 RAD51B 0 . . . 4.01 81.15 20 4.69 No 64 -6.26 No 0 0 No -19 0.86 Yes 42 74.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68939412 + NM_133509 RAD51B 0 . . . 5.73 72.43 26 5.74 Yes 39 -2.71 No 0 0 No -30 0.82 Yes 41 56.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68362834 + NM_133509 RAD51B 0 . . . 7.85 74.33 17 5.48 No 52 0.93 Yes 0 0 No -24 0.73 Yes 47 52.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108108816 + NM_000051 ATM 0 . . . 0.98 68.06 25 5.35 No 52 0.04 No 0 0 No -22 0.8 Yes 48 78.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94158000 - NM_005591 MRE11 0 . . . 6.6 85.65 30 5.83 Yes -1 0.65 No 0 0 No -35 0.34 No 49 52.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68818321 + NM_004360 CDH1 0 . . . 4.92 87 23 4.8 No 13 1.24 Yes 0 0 No -22 0.72 Yes 45 92.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68548447 + NM_133509 RAD51B 0 . . . 4.62 86.13 20 6.22 Yes 61 -1.17 No 0 0 No -29 0.45 No 45 77.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1215780 + NM_000455 STK11 0 . . . 4.71 84.17 25 4.96 No 35 1.63 Yes 0 0 No -24 0.95 Yes 44 62.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84383762 - NM_139076 FAM175A 0 . . . 0.37 70.78 22 4.07 No 49 -4.61 No 0 0 No -25 0.51 No 46 58.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68806326 + NM_133509 RAD51B 0 . . . 7.85 85.59 18 5.52 No 7 1.12 Yes 0 0 No -24 0.88 Yes 47 39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108128679 + NM_000051 ATM 0 . . . 1.48 72.21 23 5.33 No 33 1.59 Yes 0 0 No -22 0.8 Yes 43 49.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108195671 + NM_000051 ATM 0 . . . 6.87 89.58 20 4.34 No 8 1.71 Yes 0 0 No -22 0.3 No 50 91.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69135239 + NM_133509 RAD51B 0 . . . 2.98 76.11 26 5.22 No 71 -4.94 No 0 0 No -23 0.29 No 52 64.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21989006 - NM_000077 CDKN2A 0 . . . 0.55 55.08 22 5.1 No 60 0.26 No 0 0 No -21 0.89 Yes 36 40.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68906540 + NM_133509 RAD51B 0 . . . 2.32 74.22 32 6.43 Yes 37 -4.4 No 0 0 No -32 0.42 No 42 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68989864 + NM_133509 RAD51B 0 . . . 2.08 75.07 22 5.04 No 8 -0.82 No 0 0 No -43 0.34 No 46 52.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21981473 - NM_000077 CDKN2A 0 . . . 6.71 74.39 19 5.38 No 19 0.22 No 0 0 No -18 0.63 No 39 54.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896838 - NM_032043 BRIP1 0 . . . 2.41 65.83 24 5.48 No 68 0.83 Yes 0 0 No -23 0.67 Yes 42 64.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6017560 - NM_000535 PMS2 0 . . . 2.41 72.33 19 5 No 31 1.12 Yes 0 0 No -18 0.66 No 27 84.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1219906 + NM_000455 STK11 0 . . . 0.29 0 52 5.49 No 31 -2.22 No 0 0 No -26 0.5 No 28 63.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131901779 + NM_005732 RAD50 0 . . . 5.88 82.87 38 6.08 Yes 14 0.32 No 0 0 No -32 0.88 Yes 44 95.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7575607 - NM_000546 TP53 0 . . . 1.41 84.22 30 4.77 No 76 1.47 Yes 0 0 No -29 0.65 No 50 70.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68786292 + NM_133509 RAD51B 0 . . . 1.35 0 39 6.85 Yes 12 0.97 Yes 0 0 No -29 0.88 Yes 46 92.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37046513 + NM_000249 MLH1 0 . . . 4.67 80.45 15 7.55 Yes 15 0.46 No 0 0 No -18 0.4 No 43 74.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41214650 - NM_007294 BRCA1 0 . . . 2.68 67.87 23 5.39 No 69 -4.58 No 0 0 No -22 0.75 Yes 47 32.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89698993 + NM_000314 PTEN 0 . . . 5.62 73.04 15 5.83 Yes 75 0.64 No 0 0 No -26 0.39 No 19 54.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215665964 - NM_000465 BARD1 0 . . . 3.8 66.98 25 5.14 No 14 1.07 Yes 0 0 No -22 0.62 No 39 75.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48012970 + NM_000179 MSH6 0 . . . 5.72 68.83 61 5.45 No 70 -2.57 No 0 0 No -31 0.45 No 35 74.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68867223 + NM_004360 CDH1 0 . . . 4.38 78.09 27 5.88 Yes -3 1.41 Yes 0 0 No -26 0.63 No 11 75.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108105274 + NM_000051 ATM 0 . . . 3.39 65.6 14 5 No 63 -5.11 No 0 0 No -18 0.44 No 47 36.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59812260 - NM_032043 BRIP1 0 . . . 5.45 72.27 15 5.16 No 5 0.74 No 0 0 No -22 0.63 No 31 81.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68625084 + NM_133509 RAD51B 0 . . . 0.34 67.75 21 4.69 No 11 0.82 Yes 0 0 No -20 0.72 Yes 41 70.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68839365 + NM_004360 CDH1 0 . . . 6.02 69.48 20 5.1 No 42 0.99 Yes 0 0 No -19 0.6 No 38 74.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190703682 + NM_000534 PMS1 0 . . . 4.7 72.61 11 3.87 No 19 0.48 No 0 0 No -25 0.92 Yes 46 75.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23625026 - NM_024675 PALB2 0 . . . 0.07 69.77 28 3.99 No 34 0.12 No 0 0 No -17 0.44 No 43 74.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105198848 + NM_021930 RINT1 0 . . . 2.57 0 25 6.52 Yes 1 0.83 Yes 0 0 No -23 0.37 No 37 55.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68977414 + NM_133509 RAD51B 0 . . . 2.41 88.54 16 5.38 No 35 -2.86 No 0 0 No -23 0.41 No 52 54.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104173306 - NM_001100119 XRCC3 0 . . . 6.78 73.42 32 8.9 Yes 19 0.47 No 0 0 No -31 0.8 Yes 39 61.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68809903 + NM_133509 RAD51B 0 . . . 2.61 77.28 19 6.27 Yes 47 0.7 No 0 0 No -32 0.51 No 42 86.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45794850 - NM_001048171 MUTYH 0 . . . 4.77 79.37 28 5.4 No 73 0.38 No 0 0 No -27 0.86 Yes 51 78.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215629987 - NM_000465 BARD1 0 . . . 2.76 73.5 29 5.84 Yes 28 0.46 No 0 0 No -28 0.66 Yes 53 36.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7565671 - NM_000546 TP53 0 . . . 3.98 71.25 25 5.08 No 33 0.08 No 0 0 No -24 0.92 Yes 41 54.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37054753 + NM_000249 MLH1 0 . . . 5.75 70.1 52 5.98 Yes 19 0.71 No 0 0 No -31 0.52 No 39 69.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68925192 + NM_133509 RAD51B 0 . . . 5.96 86.96 14 5.35 No 65 1.76 Yes 0 0 No -48 0.53 No 42 95.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56812821 + NM_058216 RAD51C 0 . . . 7.01 75.99 17 5.29 No 32 0.72 No 0 0 No -17 0.33 No 40 91.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32955286 + NM_000059 BRCA2 0 . . . 1.89 76.64 19 5 No 22 1.02 Yes 0 0 No -18 0.45 No 45 77.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190729917 + NM_000534 PMS1 0 . . . 5.55 89.07 20 5.57 Yes 70 0.72 No 0 0 No -19 0.61 No 43 91.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104167966 - NM_001100119 XRCC3 0 . . . 2.41 68.34 15 6.86 Yes 21 1.69 Yes 0 0 No -27 0.69 Yes 37 74.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45793914 - NM_001048171 MUTYH 0 . . . 7.63 80.23 29 7.7 Yes 72 0.17 No 0 0 No -28 0.55 No 49 77.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68636343 + NM_133509 RAD51B 0 . . . 6.52 74.9 21 6.15 Yes 38 1.45 Yes 0 0 No -31 0.47 No 50 69.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47728349 + NM_000251 MSH2 0 . . . 4.03 84.22 14 5.74 Yes 33 1.71 Yes 0 0 No -26 0.67 Yes 25 91.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90947377 - NM_002485 NBN 0 . . . 1.16 56.21 72 9.21 Yes 67 0.72 No 0 0 No -32 0.53 No 39 55.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56806022 + NM_058216 RAD51C 0 . . . 0.87 71.02 20 7.14 Yes 23 0.71 No 0 0 No -19 0.7 Yes 40 91.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56794807 + NM_058216 RAD51C 0 . . . 0.59 67.13 14 4.59 No 53 0.53 No 0 0 No -28 0.43 No 41 59.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32953268 + NM_000059 BRCA2 0 . . . 6.15 85.84 14 5 No 64 -4.24 No 0 0 No -22 0.72 Yes 46 88.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215592209 - NM_000465 BARD1 0 . . . 2.42 74.3 15 5.34 No 3 0.24 No 0 0 No -22 0.78 Yes 41 87.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68327163 + NM_133509 RAD51B 0 . . . 0.2 74.42 61 5.91 Yes 12 0.48 No 0 0 No -32 0.86 Yes 46 82.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68477671 + NM_133509 RAD51B 0 . . . 4.29 74.61 18 7 Yes 75 0.28 No 0 0 No -17 0.37 No 45 91.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68819305 + NM_004360 CDH1 0 . . . 1.1 74.73 33 6.24 Yes 33 0.7 No 0 0 No -32 0.88 Yes 42 40.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68653076 + NM_133509 RAD51B 0 . . . 0.54 61.03 32 6.63 Yes 34 -3.84 No 0 0 No -31 0.6 No 38 22.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896565 - NM_032043 BRIP1 0 . . . 0.4 66.53 14 4.19 No 75 1.47 Yes 0 0 No -18 0.43 No 38 75.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84390513 - NM_139076 FAM175A 0 . . . 1.79 76.63 26 5.34 No 61 -4.06 No 0 0 No -25 0.87 Yes 43 79.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59894688 - NM_032043 BRIP1 0 . . . 2.1 81.4 12 3.93 No 69 -3.9 No 0 0 No -17 0.39 No 46 86.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23614016 - NM_024675 PALB2 0 . . . 5.36 79.93 27 5.57 Yes 6 1.13 Yes 0 0 No -26 0.53 No 52 71.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59760348 - NM_032043 BRIP1 0 . . . 0.58 68.4 22 5.57 Yes 76 1.08 Yes 0 0 No -21 0.49 No 48 77.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59837359 - NM_032043 BRIP1 0 . . . 0.73 72.01 51 7.72 Yes 47 0.54 No 0 0 No -25 0.53 No 22 27.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47702202 + NM_000251 MSH2 0 . . . 1.45 58.97 15 4 No -3 0.35 No 0 0 No -29 0.7 Yes 51 35.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59870888 - NM_032043 BRIP1 0 . . . 1.76 69.65 27 5.08 No 55 0.09 No 0 0 No -26 0.53 No 48 57.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37057393 + NM_000249 MLH1 0 . . . 1.09 0 26 4.79 No 74 0.89 Yes 0 0 No -25 0.74 Yes 41 29.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90953536 - NM_002485 NBN 0 . . . 3.05 64.3 24 6.5 Yes 41 0.91 Yes 0 0 No -23 0.5 No 22 84.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190695333 + NM_000534 PMS1 0 . . . 3.42 85.72 20 7.92 Yes 29 0.63 No 0 0 No -19 0.62 No 19 63.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69072042 + NM_133509 RAD51B 0 . . . 3.34 88.04 17 6.93 Yes 11 0.51 No 0 0 No -29 0.4 No 47 86.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68977341 + NM_133509 RAD51B 0 . . . 2.43 79 20 5.1 No 35 -2.6 No 0 0 No -19 0.47 No 43 90.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68956564 + NM_133509 RAD51B 0 . . . 5.2 80.6 18 5.19 No 38 0.92 Yes 0 0 No -35 0.86 Yes 20 80.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105203852 + NM_021930 RINT1 0 . . . 3.3 87.6 24 4.77 No 2 1.28 Yes 0 0 No -23 0.58 No 44 49.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69036761 + NM_133509 RAD51B 0 . . . 8.63 93.17 22 5.29 No 6 1.34 Yes 0 0 No -21 0.75 Yes 48 46.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68348871 + NM_133509 RAD51B 0 . . . 5.6 85.31 20 4.75 No 58 1.74 Yes 0 0 No -19 0.46 No 54 74.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68758944 + NM_133509 RAD51B 0 . . . 6.26 75.83 24 5 No 74 1.22 Yes 0 0 No -34 0.53 No 47 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69057394 + NM_133509 RAD51B 0 . . . 3.54 73.44 17 8.05 Yes 63 1.03 Yes 0 0 No -42 0.57 No 44 38.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47668710 + NM_000251 MSH2 0 . . . 0.91 75.45 23 5.2 No 59 1.14 Yes 0 0 No -22 0.67 Yes 53 50.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37054806 + NM_000249 MLH1 0 . . . 3.09 76.29 31 6.4 Yes 72 0.7 No 0 0 No -27 0.67 Yes 46 69.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6040899 - NM_000535 PMS2 0 . . . 2.36 72.27 27 6.04 Yes 20 0.2 No 0 0 No -19 0.43 No 46 68.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59883488 - NM_032043 BRIP1 0 . . . 5.35 81.2 15 5 No 20 0.57 No 0 0 No -13 0.26 No 47 61.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59806944 - NM_032043 BRIP1 0 . . . 6.12 71.57 25 4.59 No 18 0.89 Yes 0 0 No -23 0.8 Yes 37 93.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29132412 - NM_001005735 CHEK2 0 . . . 5.01 71.81 21 3.61 No 37 0.43 No 0 0 No -20 0.86 Yes 49 74.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6026150 - NM_000535 PMS2 0 . . . 4.12 76.04 43 5.08 No 13 1.15 Yes 0 0 No -29 0.49 No 45 90.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68702878 + NM_133509 RAD51B 0 . . . 4.93 78.57 17 7.68 Yes 2 0.29 No 0 0 No -27 0.42 No 44 63.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41025571 + NM_001164269 RAD51 0 . . . 3.34 55.04 19 5.66 Yes 74 -5.79 No 0 0 No -18 0.5 No 48 55.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131980433 + NM_005732 RAD50 0 . . . 0.97 69.72 19 5 No 72 1.01 Yes 0 0 No -36 0.76 Yes 42 84.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48029516 + NM_000179 MSH6 0 . . . 8.25 89.5 14 4.89 No 20 0.31 No 0 0 No -29 0.54 No 19 64.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215664092 - NM_000465 BARD1 0 . . . 1.38 75.92 53 5.49 No 33 0.33 No 0 0 No -31 0.67 Yes 41 84.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59878134 - NM_032043 BRIP1 0 . . . 9.25 87.97 10 5.2 No 64 -4.57 No 0 0 No -23 0.66 No 43 80.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68888115 + NM_133509 RAD51B 0 . . . 0.03 59.79 17 5.38 No 57 0.83 Yes 0 0 No -22 0.74 Yes 55 47.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104162548 - NM_001100119 XRCC3 0 . . . 6.08 82.04 24 6.53 Yes 62 0.92 Yes 0 0 No -23 0.88 Yes 48 63.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59803930 - NM_032043 BRIP1 0 . . . 1.38 76.67 18 4.9 No -2 0.6 No 0 0 No -45 0.46 No 60 32.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68805777 + NM_133509 RAD51B 0 . . . 1.71 70.42 24 7.55 Yes 70 0.3 No 0 0 No -24 0.75 Yes 48 69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47729119 + NM_000251 MSH2 0 . . . 3.23 80.94 25 4.83 No 57 0.51 No 0 0 No -24 0.74 Yes 41 29.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59826713 - NM_032043 BRIP1 0 . . . 4.36 83.36 31 5.95 Yes 15 1.59 Yes 0 0 No -30 0.87 Yes 50 67.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68889398 + NM_133509 RAD51B 0 . . . 3.91 69.21 22 4.75 No 55 -2.9 No 0 0 No -21 0.79 Yes 45 77.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105173849 + NM_021930 RINT1 0 . . . 7.48 77.73 24 6.62 Yes 56 -2.24 No 0 0 No -23 0.53 No 48 66.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68330406 + NM_133509 RAD51B 0 . . . 1.41 79.9 15 4.72 No 72 0.64 No 0 0 No -14 0.23 No 52 67.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152353912 - NM_005431 XRCC2 0 . . . 2.64 87.73 18 5.32 No 30 -1.22 No 0 0 No -26 0.5 No 51 52.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47684739 + NM_000251 MSH2 0 . . . 3.48 86.73 19 4.53 No 11 1.03 Yes 0 0 No -27 0.45 No 47 86.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68303000 + NM_133509 RAD51B 0 . . . 0.67 0 9 3.87 No 55 0.34 No 0 0 No -27 0.96 Yes 57 28.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68981172 + NM_133509 RAD51B 0 . . . 3.93 72.09 14 4.71 No -1 0.02 No 0 0 No -27 0.78 Yes 38 62.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68836062 + NM_133509 RAD51B 0 . . . 4.79 83.75 19 5 No 59 -3.14 No 0 0 No -27 0.3 No 47 72.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68759019 + NM_133509 RAD51B 0 . . . 2.25 81 22 5 No 30 0.97 Yes 0 0 No -21 0.91 Yes 52 74.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29114794 - NM_001005735 CHEK2 0 . . . 8.14 88.66 19 4.8 No 8 1.14 Yes 0 0 No -18 0.93 Yes 50 88.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21972808 - NM_000077 CDKN2A 0 . . . 6.69 82.52 50 7.87 Yes 71 1.35 Yes 0 0 No -49 0.51 No 42 63.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68779136 + NM_004360 CDH1 0 . . . 0.94 73.65 28 5.27 No 56 0.23 No 0 0 No -27 0.48 No 54 66.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89662844 + NM_000314 PTEN 0 . . . 1.62 0 31 4.73 No 31 1.64 Yes 0 0 No -26 0.6 No 21 67.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41025704 + NM_001164269 RAD51 0 . . . 2.92 76.63 18 5.24 No 58 -4.01 No 0 0 No -30 0.43 No 50 77.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59851443 - NM_032043 BRIP1 0 . . . 1.5 67.39 10 4.47 No 27 -3.53 No 0 0 No -38 0.43 No 46 61.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68888954 + NM_133509 RAD51B 0 . . . 7.32 72.12 18 3.86 No 24 0.62 No 0 0 No -21 0.94 Yes 34 73.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89674767 + NM_000314 PTEN 0 . . . 1.39 84.22 42 7.66 Yes 33 1.13 Yes 0 0 No -26 0.75 Yes 50 62.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89641776 + NM_000314 PTEN 0 . . . 1.51 74.82 27 6.81 Yes 54 0.73 No 0 0 No -26 0.58 No 48 79.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68861756 + NM_004360 CDH1 0 . . . 7.89 87.9 23 7.68 Yes 29 1.75 Yes 0 0 No -22 0.88 Yes 43 73.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69067901 + NM_133509 RAD51B 0 . . . 3.68 71.05 14 5.09 No 52 0.62 No 0 0 No -30 0.26 No 31 54.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108226662 + NM_000051 ATM 0 . . . 4.94 84.36 20 4.9 No 65 -2.21 No 0 0 No -19 0.89 Yes 48 87.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215643467 - NM_000465 BARD1 0 . . . 2.45 0 27 5.04 No 7 0.63 No 0 0 No -23 0.66 Yes 41 54.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68811205 + NM_133509 RAD51B 0 . . . 2.8 69.9 26 5.07 No 17 1.23 Yes 0 0 No -30 0.54 No 41 91.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68715601 + NM_133509 RAD51B 0 . . . 2.57 75.48 18 4.72 No 60 0.39 No 0 0 No -27 0.77 Yes 47 78.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190711085 + NM_000534 PMS1 0 . . . 2.16 69.26 41 5.58 Yes 46 -3.2 No 0 0 No -41 0.43 No 36 39.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108185578 + NM_000051 ATM 0 . . . 0.76 75.29 18 4.69 No 56 -4.65 No 0 0 No -15 0.46 No 50 45.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68686011 + NM_133509 RAD51B 0 . . . 4.79 75.51 17 5.39 No 15 0.83 Yes 0 0 No -16 0.38 No 43 87.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89631150 + NM_000314 PTEN 0 . . . 5.63 79.03 29 7.35 Yes 57 1.28 Yes 0 0 No -28 0.95 Yes 45 73.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68778884 + NM_133509 RAD51B 0 . . . 0.76 74.79 26 4.73 No 16 -2.86 No 0 0 No -23 0.57 No 49 68.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190714882 + NM_000534 PMS1 0 . . . 7.68 86.13 24 6.16 Yes 53 0.87 Yes 0 0 No -31 0.88 Yes 45 68.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68427804 + NM_133509 RAD51B 0 . . . 3.53 77.15 26 4.38 No 37 0.96 Yes 0 0 No -25 0.88 Yes 44 70.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68825002 + NM_004360 CDH1 0 . . . 1.86 70.83 23 5.38 No 55 1.95 Yes 0 0 No -22 0.7 Yes 26 57.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68697633 + NM_133509 RAD51B 0 . . . 0.59 63.39 15 4.58 No 28 0.2 No 0 0 No -22 0.33 No 47 59.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94202860 - NM_005591 MRE11 0 . . . 0.07 64.23 25 5.39 No 74 -5.72 No 0 0 No -24 0.73 Yes 45 39.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68594924 + NM_133509 RAD51B 0 . . . 2.95 78.49 24 3.84 No 41 -3.37 No 0 0 No -28 0.46 No 44 81.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68858220 + NM_004360 CDH1 0 . . . 4.4 76.29 15 5.38 No 70 0.81 Yes 0 0 No -30 0.41 No 51 34.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108211372 + NM_000051 ATM 0 . . . 6.86 76.79 39 5.78 Yes 69 0.54 No 0 0 No -41 0.51 No 46 63.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108125480 + NM_000051 ATM 0 . . . 0.1 0 35 4.42 No 15 1.15 Yes 0 0 No -24 0.46 No 43 93.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41274339 - NM_007294 BRCA1 0 . . . 0.06 54.87 20 4.9 No -1 0.15 No 0 0 No -32 0.4 No 59 25.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32948016 + NM_000059 BRCA2 0 . . . 4.26 76.93 25 7.07 Yes 29 1.53 Yes 0 0 No -24 0.94 Yes 29 97.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68931397 + NM_133509 RAD51B 0 . . . 5.66 88.16 45 5 No 58 2.17 Yes 0 0 No -44 0.54 No 48 89.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47721993 + NM_000251 MSH2 0 . . . 5.79 76.83 24 6.32 Yes 54 1.7 Yes 0 0 No -21 0.87 Yes 32 79.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68393000 + NM_133509 RAD51B 0 . . . 3.42 75.59 19 5.5 No 69 1.43 Yes 0 0 No -29 0.56 No 45 91.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131971961 + NM_005732 RAD50 0 . . . 1.02 54.56 17 6.93 Yes 52 0.35 No 0 0 No -29 0.41 No 48 72.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47690948 + NM_000251 MSH2 0 . . . 4.25 79.53 17 4.8 No 4 0.58 No 0 0 No -43 0.82 Yes 38 70.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68834968 + NM_004360 CDH1 0 . . . 2.74 79.48 29 5.92 Yes 52 0.64 No 0 0 No -28 0.76 Yes 48 57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32930060 + NM_000059 BRCA2 0 . . . 3.41 83.4 23 5.39 No 0 0.32 No 0 0 No -22 0.67 Yes 48 63.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69081708 + NM_133509 RAD51B 0 . . . 1.08 84.22 36 4.53 No 72 1.49 Yes 0 0 No -30 0.74 Yes 25 41.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68947152 + NM_133509 RAD51B 0 . . . 1.37 67.84 17 7.69 Yes 45 0.67 No 0 0 No -27 0.85 Yes 13 36.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84385337 - NM_139076 FAM175A 0 . . . 0.67 83.69 13 4.72 No 43 1.94 Yes 0 0 No -24 0.5 No 42 88.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68314645 + NM_133509 RAD51B 0 . . . 3.06 0 24 5.08 No 2 1.11 Yes 0 0 No -23 0.79 Yes 37 43.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104174154 - NM_001100119 XRCC3 0 . . . 5.45 85.59 20 4.9 No 73 0.46 No 0 0 No -19 0.36 No 42 62.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108206309 + NM_000051 ATM 0 . . . 6.77 87.69 20 7.07 Yes 57 1.13 Yes 0 0 No -30 0.61 No 51 47.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32945535 + NM_000059 BRCA2 0 . . . 4.43 62.96 15 5.1 No 69 0.85 Yes 0 0 No -29 0.35 No 36 67.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89672067 + NM_000314 PTEN 0 . . . 3.68 0 21 5.5 No 48 1.69 Yes 0 0 No -20 0.96 Yes 48 34.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131918788 + NM_005732 RAD50 0 . . . 0.6 76.16 23 4.97 No 0 0.45 No 0 0 No -23 0.73 Yes 51 52.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68994937 + NM_133509 RAD51B 0 . . . 5.06 72.42 28 5.7 Yes 10 0.63 No 0 0 No -27 0.79 Yes 48 65.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33430174 - NM_002878 RAD51D 0 . . . 3 0 17 6.48 Yes 63 0.74 No 0 0 No -16 0.8 Yes 17 46.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7563729 - NM_000546 TP53 0 . . . 0.57 63.56 29 7.68 Yes 16 1 Yes 0 0 No -28 0.94 Yes 42 64.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152347677 - NM_005431 XRCC2 0 . . . 6.19 66.29 18 5.39 No 76 1.64 Yes 0 0 No -17 0.58 No 49 61.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69020492 + NM_133509 RAD51B 0 . . . 4.92 68.71 14 4.45 No 16 -2.22 No 0 0 No -29 0.43 No 47 50.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68371346 + NM_133509 RAD51B 0 . . . 3.48 90.41 23 5 No 33 1.13 Yes 0 0 No -22 0.61 No 50 65.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68486272 + NM_133509 RAD51B 0 . . . 0.76 71.68 26 5.15 No 62 -2.52 No 0 0 No -25 0.67 Yes 45 65.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47654334 + NM_000251 MSH2 0 . . . 1.57 65.69 18 4.9 No 28 0.16 No 0 0 No -51 0.66 No 49 46.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29115596 - NM_001005735 CHEK2 0 . . . 6.47 82.61 18 6.7 Yes -1 1.16 Yes 0 0 No -25 0.17 No 33 71.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131973676 + NM_005732 RAD50 0 . . . 1.88 72.76 26 6.71 Yes 49 0.33 No 0 0 No -25 0.62 No 43 69.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90957969 - NM_002485 NBN 0 . . . 0.36 65.13 18 5.42 No 57 -5.32 No 0 0 No -23 0.79 Yes 53 32.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69017859 + NM_133509 RAD51B 0 . . . 2.92 74.78 27 5.3 No 64 1.13 Yes 0 0 No -23 0.5 No 54 38.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47802447 + NM_000251 MSH2 0 . . . 0.69 59.33 14 5.2 No 25 0.51 No 0 0 No -22 0.53 No 18 18.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59936492 - NM_032043 BRIP1 0 . . . 4.64 78.11 13 4.78 No 74 1.42 Yes 0 0 No -28 0.82 Yes 41 47.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47649071 + NM_000251 MSH2 0 . . . 5.73 75.48 22 5.74 Yes 75 1.08 Yes 0 0 No -21 0.66 Yes 49 60.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69062922 + NM_133509 RAD51B 0 . . . 3.3 85.49 31 4.9 No -4 0.67 No 0 0 No -30 0.79 Yes 48 34.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29105273 - NM_001005735 CHEK2 0 . . . 0.5 59.9 15 4.71 No 42 0.6 No 0 0 No -28 0.5 No 23 61.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68851805 + NM_133509 RAD51B 0 . . . 3.49 67.13 18 4.9 No -3 1.34 Yes 0 0 No -26 0.59 No 35 86.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68762923 + NM_133509 RAD51B 0 . . . 4.3 71.89 43 7.2 Yes 22 0.94 Yes 0 0 No -42 0.75 Yes 42 66.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68925343 + NM_133509 RAD51B 0 . . . 3.17 87.7 20 5.08 No 23 0.5 No 0 0 No -36 0.78 Yes 60 26.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68373707 + NM_133509 RAD51B 0 . . . 4.32 85.02 25 4.22 No 3 1.16 Yes 0 0 No -24 0.65 No 44 61.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59893469 - NM_032043 BRIP1 0 . . . 4.43 68.71 41 10.38 Yes 44 0.22 No 0 0 No -40 0.74 Yes 41 58.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108210355 + NM_000051 ATM 0 . . . 4.98 68.38 13 5.32 No 14 0.04 No 0 0 No -20 0.55 No 38 74.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68983808 + NM_133509 RAD51B 0 . . . 2.49 66.82 37 6.16 Yes 35 0.7 No 0 0 No -36 0.96 Yes 46 54.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90944543 - NM_002485 NBN 0 . . . 0.93 0 28 6.19 Yes 36 1.66 Yes 0 0 No -34 0.6 No 27 70.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59794407 - NM_032043 BRIP1 0 . . . 1.61 73.93 18 4.75 No 45 0.97 Yes 0 0 No -25 0.39 No 48 68.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215593388 - NM_000465 BARD1 0 . . . 2.16 70.79 21 4.47 No 33 1 Yes 0 0 No -20 0.82 Yes 50 88.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105186417 + NM_021930 RINT1 0 . . . 4.16 63.82 26 5.66 Yes 56 0.04 No 0 0 No -25 0.82 Yes 44 62.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108141209 + NM_000051 ATM 0 . . . 4.29 0 18 6.1 Yes 63 0.62 No 0 0 No -21 0.48 No 32 71.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68835003 + NM_004360 CDH1 0 . . . 0.96 72.43 20 5.41 No 1 0.94 Yes 0 0 No -19 0.57 No 50 55.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59887214 - NM_032043 BRIP1 0 . . . 3.24 82.61 45 8.71 Yes 9 0.55 No 0 0 No -32 0.65 No 53 42.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47792486 + NM_000251 MSH2 0 . . . 6.13 0 23 6.29 Yes 9 0.92 Yes 0 0 No -23 0.6 No 46 90.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47630831 + NM_000251 MSH2 0 . . . 4.13 0 59 6.85 Yes 14 0.71 No 0 0 No -33 0.61 No 44 80.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68466577 + NM_133509 RAD51B 0 . . . 3.33 68.22 31 6 Yes 76 0.36 No 0 0 No -30 0.52 No 47 66.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68613584 + NM_133509 RAD51B 0 . . . 4.67 60.72 20 5.65 Yes 69 0.07 No 0 0 No -47 0.84 Yes 50 65.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59815698 - NM_032043 BRIP1 0 . . . 1.86 74.01 35 6.71 Yes 2 0.01 No 0 0 No -34 0.42 No 48 53.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68586585 + NM_133509 RAD51B 0 . . . 1.46 67.5 37 6.38 Yes 60 -4.75 No 0 0 No -36 0.86 Yes 39 74.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190726890 + NM_000534 PMS1 0 . . . 7.5 81.28 18 4.98 No 41 0.5 No 0 0 No -24 0.6 No 47 67.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68775575 + NM_133509 RAD51B 0 . . . 5.73 74.03 22 6.37 Yes 8 1.05 Yes 0 0 No -25 0.8 Yes 49 79.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68303727 + NM_133509 RAD51B 0 . . . 2.56 0 23 4.88 No 16 0.63 No 0 0 No -17 0.31 No 42 67.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68855334 + NM_133509 RAD51B 0 . . . 2.52 77.61 21 4.79 No 60 0.61 No 0 0 No -20 0.88 Yes 47 44.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68816739 + NM_004360 CDH1 0 . . . 5.78 70.91 25 6.16 Yes 37 1.54 Yes 0 0 No -24 0.9 Yes 28 67.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131945692 + NM_005732 RAD50 0 . . . 5.34 77.45 22 5.04 No 68 1.45 Yes 0 0 No -27 0.77 Yes 41 90.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68753030 + NM_133509 RAD51B 0 . . . 5.67 0 28 5.37 No 2 0.94 Yes 0 0 No -27 0.7 Yes 42 53.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68504870 + NM_133509 RAD51B 0 . . . 3.21 79.37 9 3.87 No 36 1.15 Yes 0 0 No -25 0.51 No 47 93.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47647252 + NM_000251 MSH2 0 . . . 5.32 77.96 26 5.66 Yes 58 1.15 Yes 0 0 No -25 0.67 Yes 55 37.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105178541 + NM_021930 RINT1 0 . . . 2.63 68.36 29 6.54 Yes 59 1.91 Yes 0 0 No -28 0.83 Yes 42 90.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89658984 + NM_000314 PTEN 0 . . . 5.38 78.04 31 6.38 Yes 60 0.65 No 0 0 No -30 0.74 Yes 43 58.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84404334 - NM_139076 FAM175A 0 . . . 0.42 67.24 21 5.67 Yes 71 -5.31 No 0 0 No -20 0.81 Yes 45 94.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131893629 + NM_005732 RAD50 0 . . . 1.43 64.88 19 7.07 Yes -2 0.35 No 0 0 No -18 0.62 No 52 21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807383 + NM_004360 CDH1 0 . . . 6.4 85.02 22 4.58 No 6 1.14 Yes 0 0 No -41 0.55 No 52 78.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21986006 - NM_000077 CDKN2A 0 . . . 3.8 73.85 17 4.8 No 76 -4.81 No 0 0 No -21 0.47 No 51 78.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131936967 + NM_005732 RAD50 0 . . . 2.82 88.45 31 5.57 Yes 37 0.95 Yes 0 0 No -25 0.66 No 44 61.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190657856 + NM_000534 PMS1 0 . . . 7.52 85.27 19 5.85 Yes 70 0.8 Yes 0 0 No -29 0.58 No 40 79.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69098784 + NM_133509 RAD51B 0 . . . 4.74 75.09 19 4.58 No 14 1.78 Yes 0 0 No -18 0.92 Yes 44 85.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33432268 - NM_002878 RAD51D 0 . . . 0.53 76.68 19 7.07 Yes -3 0.51 No 0 0 No -18 0.39 No 48 80.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68759647 + NM_133509 RAD51B 0 . . . 2.45 72.53 27 5.17 No -1 0.42 No 0 0 No -24 0.7 Yes 50 84.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89637107 + NM_000314 PTEN 0 . . . 4.03 82.63 28 5.32 No 12 0.91 Yes 0 0 No -23 0.41 No 50 72.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47759619 + NM_000251 MSH2 0 . . . 1.19 81.72 17 6.85 Yes 3 0.82 Yes 0 0 No -27 0.42 No 50 85.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68944719 + NM_133509 RAD51B 0 . . . 2.12 70.37 26 6.24 Yes 56 0.48 No 0 0 No -25 0.92 Yes 50 41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47755150 + NM_000251 MSH2 0 . . . 5.69 88.08 22 4.06 No 40 1.35 Yes 0 0 No -27 0.48 No 43 69.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94176363 - NM_005591 MRE11 0 . . . 5.74 85.69 24 4.49 No 5 0.49 No 0 0 No -24 0.57 No 45 88.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1213114 + NM_000455 STK11 0 . . . 5.21 84.22 14 5 No 33 1.05 Yes 0 0 No -18 0.61 No 50 93.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59791835 - NM_032043 BRIP1 0 . . . 0.47 67.8 25 4.71 No 70 -2.23 No 0 0 No -28 0.34 No 30 61.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510083 - NM_001040108 MLH3 0 . . . 8.9 83.02 28 4.77 No 1 1.6 Yes 0 0 No -35 0.65 No 47 58.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68372356 + NM_133509 RAD51B 0 . . . 6.73 67.83 33 5.96 Yes 47 1.83 Yes 0 0 No -36 0.53 No 45 62.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68748283 + NM_133509 RAD51B 0 . . . 5.18 84.39 16 4.57 No 15 1.32 Yes 0 0 No -29 0.63 No 43 64.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68985869 + NM_133509 RAD51B 0 . . . 7.71 90.8 20 7.68 Yes 53 0.37 No 0 0 No -31 0.46 No 47 75.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68600704 + NM_133509 RAD51B 0 . . . 3.76 81.79 22 4.37 No 4 0.39 No 0 0 No -21 0.67 Yes 47 64.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137916 + NM_133509 RAD51B 0 . . . 0.04 72.08 44 7.41 Yes 31 0.61 No 0 0 No -43 0.88 Yes 43 57.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108231714 + NM_000051 ATM 0 . . . 0.76 67.02 29 5.48 No 68 1.55 Yes 0 0 No -28 0.95 Yes 53 23.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68535242 + NM_133509 RAD51B 0 . . . 5.17 69.84 28 6.09 Yes 61 0.79 Yes 0 0 No -28 0.68 Yes 38 77.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68725083 + NM_133509 RAD51B 0 . . . 0.45 70.65 23 5.16 No 61 -4.5 No 0 0 No -20 0.68 Yes 49 71.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105191907 + NM_021930 RINT1 0 . . . 1.06 68.56 27 5.2 No 48 0.3 No 0 0 No -26 0.76 Yes 51 44.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47677206 + NM_000251 MSH2 0 . . . 6.23 81.51 34 6.77 Yes 16 0.23 No 0 0 No -24 0.46 No 37 93.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68396067 + NM_133509 RAD51B 0 . . . 4.96 80.32 24 5.06 No 6 0.63 No 0 0 No -23 0.86 Yes 34 78.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94224319 - NM_005591 MRE11 0 . . . 5.53 64.09 30 4.05 No 35 -1.84 No 0 0 No -22 0.72 Yes 43 72.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68427221 + NM_133509 RAD51B 0 . . . 1.98 66.33 62 5.45 No 25 -2.18 No 0 0 No -28 0.92 Yes 35 31.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68630761 + NM_133509 RAD51B 0 . . . 3.28 73.85 22 5.09 No 74 0.5 No 0 0 No -44 0.7 Yes 37 75.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48019338 + NM_000179 MSH6 0 . . . 0.42 74.73 15 6 Yes 33 1.02 Yes 0 0 No -23 0.69 Yes 25 61.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59896446 - NM_032043 BRIP1 0 . . . 1.41 84.22 33 4.19 No 76 1.5 Yes 0 0 No -32 0.65 No 50 61.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68578518 + NM_133509 RAD51B 0 . . . 3.38 74.25 11 4.58 No 20 -2.2 No 0 0 No -38 0.48 No 49 45.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108147116 + NM_000051 ATM 0 . . . 5.5 85.45 14 5.45 No 1 0.87 Yes 0 0 No -27 0.4 No 43 81.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94222038 - NM_005591 MRE11 0 . . . 2.2 77.98 34 5.74 Yes 54 -2.83 No 0 0 No -33 0.59 No 47 75.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7573671 - NM_000546 TP53 0 . . . 4.28 75.43 22 4.77 No 75 1.03 Yes 0 0 No -21 0.77 Yes 39 82.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68968222 + NM_133509 RAD51B 0 . . . 4.56 68.7 27 5.74 Yes 65 -5.53 No 0 0 No -26 0.91 Yes 45 51.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84384416 - NM_139076 FAM175A 0 . . . 7.02 80.12 10 4.9 No 10 1.27 Yes 0 0 No -18 0.37 No 48 92.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32911202 + NM_000059 BRCA2 0 . . . 3.68 81.97 38 7 Yes 0 0.86 Yes 0 0 No -37 0.81 Yes 46 96.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47646642 + NM_000251 MSH2 0 . . . 4.22 74.8 23 5.33 No -1 1.17 Yes 0 0 No -22 0.77 Yes 17 76.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131902629 + NM_005732 RAD50 0 . . . 1.69 0 29 3.9 No 66 1.07 Yes 0 0 No -29 0.65 No 19 66.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59847230 - NM_032043 BRIP1 0 . . . 4.36 61.83 22 4.27 No 1 0.21 No 0 0 No -26 0.43 No 57 45.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538986 + NM_133509 RAD51B 0 . . . 4.38 71.96 14 5.44 No 46 -4.83 No 0 0 No -25 0.64 No 52 32.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69078046 + NM_133509 RAD51B 0 . . . 8.3 88.72 15 4.47 No 71 1.4 Yes 0 0 No -58 0.39 No 47 77.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68952370 + NM_133509 RAD51B 0 . . . 7.33 78.25 28 5.45 No 18 1.36 Yes 0 0 No -28 0.85 Yes 40 93.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69056098 + NM_133509 RAD51B 0 . . . 8.88 85.96 30 4.87 No 25 2.64 Yes 0 0 No -25 0.67 Yes 33 94.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68404364 + NM_133509 RAD51B 0 . . . 2.31 76.32 42 7.35 Yes 19 0.05 No 0 0 No -41 0.36 No 50 71.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68721038 + NM_133509 RAD51B 0 . . . 1.37 74.83 28 5.29 No 28 0.15 No 0 0 No -24 0.41 No 20 48.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68977532 + NM_133509 RAD51B 0 . . . 8.13 77.28 17 5.12 No 57 0.77 Yes 0 0 No -23 0.85 Yes 44 82.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47652185 + NM_000251 MSH2 0 . . . 3.76 73.39 20 5.66 Yes 56 0.22 No 0 0 No -19 0.66 No 37 66.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68464609 + NM_133509 RAD51B 0 . . . 1.9 70.24 59 7.68 Yes 4 0.91 Yes 0 0 No -58 0.65 No 50 44.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41223127 - NM_007294 BRCA1 0 . . . 2.89 68.21 32 4.66 No 66 1.31 Yes 24 0.3 Yes -25 0.76 Yes 39 72.35 Yes BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68462546 + NM_133509 RAD51B 0 . . . 4.45 75.25 28 5.38 No 34 1.18 Yes 0 0 No -27 0.57 No 24 56.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68663716 + NM_133509 RAD51B 0 . . . 3.28 69.34 25 6.71 Yes 49 -4.13 No 0 0 No -24 0.7 Yes 43 42.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75480597 - NM_001040108 MLH3 0 . . . 5.06 75.24 21 6.32 Yes 10 0.73 No 0 0 No -14 0.31 No 48 77.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69049979 + NM_133509 RAD51B 0 . . . 4.16 0 22 5.74 Yes 4 1.12 Yes 0 0 No -21 0.81 Yes 49 61.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68992403 + NM_133509 RAD51B 0 . . . 0.14 0 9 5.1 No 50 1.11 Yes 0 0 No -31 0.5 No 47 73.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89629744 + NM_000314 PTEN 0 . . . 3.49 74.06 15 6 Yes 8 0.61 No 0 0 No -29 0.28 No 50 67.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105177854 + NM_021930 RINT1 0 . . . 0.67 77.94 21 5.1 No 37 1.7 Yes 0 0 No -20 0.58 No 31 54.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59820307 - NM_032043 BRIP1 0 . . . 0.75 0 12 3.69 No 36 0.25 No 0 0 No -20 0.46 No 36 39.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108216539 + NM_000051 ATM 0 . . . 3.92 72.67 17 6.93 Yes 36 -3.36 No 0 0 No -25 0.77 Yes 42 92.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47665381 + NM_000251 MSH2 0 . . . 8.96 83.96 20 4.8 No 9 0.96 Yes 0 0 No -43 0.54 No 49 83.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68309542 + NM_133509 RAD51B 0 . . . 2.03 59.34 30 5.46 No 63 0.44 No 0 0 No -27 0.59 No 35 55.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131933011 + NM_005732 RAD50 0 . . . 5.55 72.88 16 3.75 No 22 1.02 Yes 0 0 No -18 0.31 No 36 82.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190680526 + NM_000534 PMS1 0 . . . 4.04 72.72 24 5.2 No 5 0.6 No 0 0 No -23 0.81 Yes 41 96.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90946272 - NM_002485 NBN 0 . . . 0.74 75.99 25 5.99 Yes 47 0.64 No 0 0 No -24 0.88 Yes 11 43.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68831826 + NM_133509 RAD51B 0 . . . 0.26 63.73 25 7.61 Yes 33 1.03 Yes 0 0 No -24 0.9 Yes 14 43.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69076773 + NM_133509 RAD51B 0 . . . 2.32 0 25 5.4 No 12 0.65 No 0 0 No -24 0.57 No 46 41.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68918784 + NM_133509 RAD51B 0 . . . 3.77 71.13 23 5.39 No 45 0.69 No 0 0 No -22 0.83 Yes 56 55.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59843858 - NM_032043 BRIP1 0 . . . 8.38 77.92 35 5.87 Yes 69 0.66 No 0 0 No -34 0.76 Yes 39 89.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190667272 + NM_000534 PMS1 0 . . . 0.84 76.12 16 5.81 Yes 25 -2.07 No 0 0 No -29 0.84 Yes 45 48.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68342407 + NM_133509 RAD51B 0 . . . 3.17 68.99 28 6.09 Yes 51 -3.33 No 0 0 No -28 0.69 Yes 47 66.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90984622 - NM_002485 NBN 0 . . . 9.27 87.17 14 5.36 No 39 1.78 Yes 0 0 No -27 0.56 No 51 50.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190729050 + NM_000534 PMS1 0 . . . 0.31 64.6 18 4.47 No 76 0.31 No 0 0 No -17 0.86 Yes 49 59.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68700395 + NM_133509 RAD51B 0 . . . 0.38 78.37 24 5.09 No 76 0.44 No 0 0 No -23 0.9 Yes 51 66.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29130968 - NM_001005735 CHEK2 0 . . . 7.35 86.82 43 6.51 Yes -4 0.92 Yes 0 0 No -25 0.85 Yes 35 86.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68850243 + NM_133509 RAD51B 0 . . . 2.19 76.23 15 3.69 No 12 0.29 No 0 0 No -24 0.32 No 46 73.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68595728 + NM_133509 RAD51B 0 . . . 5.92 87.5 16 4.6 No 42 0.67 No 0 0 No -20 0.55 No 39 83.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215603966 - NM_000465 BARD1 0 . . . 12.06 92.63 61 6.89 Yes 23 0.95 Yes 0 0 No -22 0.52 No 42 52.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190701368 + NM_000534 PMS1 0 . . . 0.72 53.49 35 6.08 Yes 17 0.72 No 0 0 No -35 0.53 No 41 78.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21974977 - NM_000077 CDKN2A 0 . . . 0.43 75.22 48 8.36 Yes 31 1.71 Yes 0 0 No -36 0.4 No 27 72.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68833802 + NM_004360 CDH1 0 . . . 0.1 74.68 18 4.79 No 53 0.66 No 0 0 No -25 0.44 No 47 85.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89717238 + NM_000314 PTEN 0 . . . 0.59 64.36 21 5.66 Yes 49 0.99 Yes 0 0 No -20 0.79 Yes 48 37.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21983580 - NM_000077 CDKN2A 0 . . . 1.24 63.26 27 6.06 Yes 68 0.21 No 0 0 No -26 0.63 No 44 40.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68727464 + NM_133509 RAD51B 0 . . . 7.92 86.8 20 4.42 No -1 1.08 Yes 0 0 No -19 0.82 Yes 49 74.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105197468 + NM_021930 RINT1 0 . . . 1.75 60.88 21 5.77 Yes 15 -2.3 No 0 0 No -20 0.61 No 23 21.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89692344 + NM_000314 PTEN 0 . . . 1.27 76.67 21 5.64 Yes 53 0.63 No 0 0 No -25 0.66 No 37 40.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59883481 - NM_032043 BRIP1 0 . . . 1.95 0 15 4.58 No 27 0.55 No 0 0 No -39 0.59 No 40 66.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68866694 + NM_004360 CDH1 0 . . . 2.28 80.22 17 4.69 No 58 -3.87 No 0 0 No -17 0.44 No 39 46.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68836935 + NM_133509 RAD51B 0 . . . 1.28 71.74 23 4.9 No 62 1.01 Yes 0 0 No -20 0.58 No 40 47.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6021143 - NM_000535 PMS2 0 . . . 1.18 76.51 22 4.9 No 43 -4.28 No 0 0 No -21 0.92 Yes 46 45.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89731923 + NM_000314 PTEN 0 . . . 7.42 82.38 53 5.31 No 74 -4.23 No 0 0 No -25 0.71 Yes 40 42.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41196027 - NM_007294 BRCA1 0 . . . 5.78 80.75 17 4.8 No 75 0.98 Yes 0 0 No -16 0.63 No 51 57.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94153841 - NM_005591 MRE11 0 . . . 4.54 80.69 53 6.09 Yes 43 0.92 Yes 0 0 No -33 0.67 Yes 15 73.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68767924 + NM_133509 RAD51B 0 . . . 7.11 81.27 24 7.3 Yes 59 0.99 Yes 0 0 No -23 0.96 Yes 41 69.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68903939 + NM_133509 RAD51B 0 . . . 2.74 87.6 38 6.4 Yes 13 1.03 Yes 0 0 No -24 0.47 No 36 58.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59838375 - NM_032043 BRIP1 0 . . . 4.07 72.86 24 5.01 No 70 0.87 Yes 0 0 No -23 0.82 Yes 44 45.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68994351 + NM_133509 RAD51B 0 . . . 7.73 77.48 23 5.38 No 4 1 Yes 0 0 No -22 0.87 Yes 40 51.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40988615 + NM_001164269 RAD51 0 . . . 7.13 73.82 18 5.87 Yes 10 0.2 No 0 0 No -20 0.57 No 48 80.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68482899 + NM_133509 RAD51B 0 . . . 7.72 85.1 15 5.52 No 11 0.02 No 0 0 No -28 0.43 No 47 78.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108185952 + NM_000051 ATM 0 . . . 0.94 74.26 37 6.15 Yes 1 0.26 No 0 0 No -36 0.8 Yes 46 95.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59815555 - NM_032043 BRIP1 0 . . . 0.96 72.36 42 6.63 Yes 46 0.25 No 0 0 No -41 0.75 Yes 32 44.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215647073 - NM_000465 BARD1 0 . . . 8.95 88.47 32 6 Yes 5 0.57 No 0 0 No -24 0.74 Yes 49 87.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59833393 - NM_032043 BRIP1 0 . . . 3.32 69.61 24 5.97 Yes 58 0.84 Yes 0 0 No -31 0.61 No 63 45.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89695663 + NM_000314 PTEN 0 . . . 2.5 70.51 29 5.83 Yes 16 0.28 No 0 0 No -28 0.84 Yes 42 71.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7575563 - NM_000546 TP53 0 . . . 0.94 71.09 30 7.34 Yes 47 0.71 No 0 0 No -29 0.74 Yes 48 56.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47665328 + NM_000251 MSH2 0 . . . 5.5 79.02 19 4.34 No 16 -2.35 No 0 0 No -56 0.35 No 47 91.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89731670 + NM_000314 PTEN 0 . . . 2.96 50.6 23 5.39 No 49 0.45 No 0 0 No -22 0.9 Yes 36 74.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48019700 + NM_000179 MSH6 0 . . . 2.27 67.66 16 5.57 Yes 51 1.41 Yes 0 0 No -20 0.59 No 47 57.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47724984 + NM_000251 MSH2 0 . . . 7.01 82.22 23 5.54 No 66 1.58 Yes 0 0 No -22 0.55 No 46 56.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68359065 + NM_133509 RAD51B 0 . . . 7.15 85.04 22 5.29 No 12 1.25 Yes 0 0 No -21 0.92 Yes 39 68.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68864838 + NM_133509 RAD51B 0 . . . 1.31 0 21 4.58 No 62 0.74 No 0 0 No -20 0.87 Yes 29 54.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94195073 - NM_005591 MRE11 0 . . . 2.24 80.12 37 3.84 No 7 1.36 Yes 0 0 No -22 0.49 No 51 78.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68825033 + NM_133509 RAD51B 0 . . . 6.31 77.58 17 4.69 No 63 -5.07 No 0 0 No -21 0.44 No 39 50.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69074430 + NM_133509 RAD51B 0 . . . 8.13 77.71 22 6.31 Yes 66 -0.67 No 0 0 No -36 0.52 No 33 72.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7587295 - NM_000546 TP53 0 . . . 0.28 74.23 16 5.09 No 38 -2.33 No 0 0 No -19 0.59 No 54 80.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41252067 - NM_007294 BRCA1 0 . . . 0.98 76.72 23 4.9 No 49 0.53 No 0 0 No -22 0.56 No 48 49.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131911411 + NM_005732 RAD50 0 . . . 7.59 87.83 33 5.62 Yes 3 0.94 Yes 0 0 No -25 0.57 No 48 50.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68402426 + NM_133509 RAD51B 0 . . . 7.82 75.03 51 7.2 Yes 48 0.55 No 0 0 No -28 0.39 No 44 44.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90964285 - NM_002485 NBN 0 . . . 3.38 0 18 5.45 No 54 0.2 No 0 0 No -23 0.55 No 52 58.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29086775 - NM_001005735 CHEK2 0 . . . 12.02 92.55 20 7.14 Yes NA NA NA 0 0 No -19 0.69 Yes 44 49.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89648731 + NM_000314 PTEN 0 . . . 3.6 71.83 23 4.26 No 73 0.14 No 0 0 No -25 0.8 Yes 32 53.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68937168 + NM_133509 RAD51B 0 . . . 4.17 76.09 15 5.47 No -3 0.06 No 0 0 No -44 0.29 No 52 57.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90975788 - NM_002485 NBN 0 . . . 4.34 59.71 15 5.57 Yes 46 0.95 Yes 0 0 No -28 0.73 Yes 46 85.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68967896 + NM_133509 RAD51B 0 . . . 6.15 86.72 25 4 No 51 -3.32 No 0 0 No -24 0.55 No 52 61.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68875152 + NM_133509 RAD51B 0 . . . 0.2 67.44 124 13.34 Yes 61 0.01 No 0 0 No -38 0.41 No 52 56.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89642513 + NM_000314 PTEN 0 . . . 5 64.12 12 4.24 No 63 2.4 Yes 0 0 No -24 0.73 Yes 39 74.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37071856 + NM_000249 MLH1 0 . . . 2.03 71.02 16 4.85 No 69 0.59 No 0 0 No -20 0.66 No 64 22.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071092 + NM_133509 RAD51B 0 . . . 0.28 63.33 33 6.19 Yes 24 -1.96 No 0 0 No -32 0.83 Yes 49 30.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94170528 - NM_005591 MRE11 0 . . . 3.35 52.56 39 6.53 Yes 26 0.69 No 0 0 No -25 0.72 Yes 29 47.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68781851 + NM_004360 CDH1 0 . . . 2.24 80.12 20 4.25 No 7 1.16 Yes 0 0 No -17 0.89 Yes 38 68.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56800242 + NM_058216 RAD51C 0 . . . 6.92 80.92 26 4.1 No 41 1.5 Yes 0 0 No -34 0.72 Yes 17 54.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68867658 + NM_004360 CDH1 0 . . . 0.17 63.63 23 4.96 No 76 0.83 Yes 0 0 No -22 0.96 Yes 18 95.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59852140 - NM_032043 BRIP1 0 . . . 1.13 67.21 43 7.01 Yes 15 0.93 Yes 0 0 No -23 0.82 Yes 54 41.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68306947 + NM_133509 RAD51B 0 . . . 4.73 76.92 15 6.32 Yes 74 -2.87 No 0 0 No -22 0.41 No 38 73.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69030853 + NM_133509 RAD51B 0 . . . 2.53 81.56 20 5.1 No 7 0.59 No 0 0 No -23 0.76 Yes 51 71.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215637077 - NM_000465 BARD1 0 . . . 6.58 78.52 14 4.9 No 32 0.05 No 0 0 No -24 0.42 No 41 79.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7575954 - NM_000546 TP53 0 . . . 7.13 74.24 23 5.2 No 61 2.18 Yes 0 0 No -22 0.81 Yes 50 88.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68719337 + NM_133509 RAD51B 0 . . . 4.46 76.41 24 4.9 No 31 0.12 No 0 0 No -23 0.81 Yes 38 56.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94156003 - NM_005591 MRE11 0 . . . 3.96 83.65 22 5.29 No 72 1.1 Yes 0 0 No -21 0.52 No 44 67.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89658000 + NM_000314 PTEN 0 . . . 4.71 64.76 23 5.51 No 9 1.4 Yes 0 0 No -22 0.9 Yes 49 80.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68833673 + NM_133509 RAD51B 0 . . . 2.13 0 9 5.66 Yes 15 0.53 No 0 0 No -25 0.3 No 34 50.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108152461 + NM_000051 ATM 0 . . . 1.63 62.79 20 3.5 No 35 -1.99 No 0 0 No -25 0.79 Yes 43 75.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40998589 + NM_001164269 RAD51 0 . . . 4.18 80.88 54 5.67 Yes 16 0.58 No 0 0 No -34 0.62 No 46 46.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190717958 + NM_000534 PMS1 0 . . . 4.92 84.69 53 5.96 Yes 1 1.06 Yes 0 0 No -25 0.74 Yes 46 65.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68704149 + NM_133509 RAD51B 0 . . . 0.44 65.84 9 5.1 No 74 -3.78 No 0 0 No -44 0.69 Yes 38 78.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94170677 - NM_005591 MRE11 0 . . . 7.75 96.99 17 4.72 No -3 -1.6 No 0 0 No -21 0.52 No 51 70.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68433164 + NM_133509 RAD51B 0 . . . 2.54 61.61 22 5.29 No 53 2.2 Yes 0 0 No -40 0.59 No 25 64.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6023232 - NM_000535 PMS2 0 . . . 4.09 73.89 24 5.48 No 2 0.49 No 0 0 No -23 0.88 Yes 49 74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41242903 - NM_007294 BRCA1 0 . . . 1.34 73.97 19 4.35 No 56 -2.14 No 0 0 No -18 0.63 No 35 62.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59768556 - NM_032043 BRIP1 0 . . . 3.7 75.37 50 6.04 Yes 44 0.47 No 0 0 No -34 0.55 No 14 72.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69129106 + NM_133509 RAD51B 0 . . . 3.16 78.87 34 7.72 Yes 52 0.64 No 0 0 No -28 0.52 No 42 40.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47748186 + NM_000251 MSH2 0 . . . 1.78 0 18 4.9 No 41 -0.84 No 0 0 No -23 0.53 No 54 41.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59757025 - NM_032043 BRIP1 0 . . . 3.83 64.87 18 4.89 No 42 -2.68 No 0 0 No -25 0.37 No 45 53.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59807704 - NM_032043 BRIP1 0 . . . 1.68 72.64 27 5.77 Yes 32 1.11 Yes 0 0 No -30 0.53 No 22 34.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40999503 + NM_001164269 RAD51 0 . . . 3.58 67.09 60 7.63 Yes 68 0.89 Yes 0 0 No -33 0.47 No 44 78.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131978560 + NM_005732 RAD50 0 . . . 3.15 79.34 22 5.72 Yes 69 -3.4 No 0 0 No -27 0.55 No 30 50.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190680381 + NM_000534 PMS1 0 . . . 9.15 92.02 22 4.7 No 41 0.67 No 0 0 No -21 0.79 Yes 47 77.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75494677 - NM_001040108 MLH3 0 . . . 1.16 78.18 16 5.55 No 65 0.13 No 0 0 No -27 0.62 No 45 74.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108132119 + NM_000051 ATM 0 . . . 3.99 78.23 36 6.08 Yes 58 2.3 Yes 0 0 No -30 0.39 No 54 60.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75481817 - NM_001040108 MLH3 0 . . . 2.12 66.25 20 7.13 Yes 74 0.93 Yes 0 0 No -30 0.58 No 54 53.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68654289 + NM_133509 RAD51B 0 . . . 2.35 69.1 16 4.69 No 24 0.27 No 0 0 No -22 0.33 No 36 51.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68716723 + NM_133509 RAD51B 0 . . . 2.37 71.9 21 4.86 No 37 0.5 No 0 0 No -21 0.56 No 39 49.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89704518 + NM_000314 PTEN 0 . . . 6.16 69.54 33 7.21 Yes 33 2.13 Yes 0 0 No -32 0.94 Yes 37 82.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68861145 + NM_004360 CDH1 0 . . . 0.38 76.32 17 6.08 Yes 58 -3.87 No 0 0 No -16 0.68 Yes 48 81.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190728161 + NM_000534 PMS1 0 . . . 4.91 85.02 24 5.29 No 4 1.79 Yes 0 0 No -23 0.68 Yes 41 54.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131976828 + NM_005732 RAD50 0 . . . 3.41 74.18 24 3.49 No 54 0.13 No 0 0 No -26 0.41 No 42 73.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37063323 + NM_000249 MLH1 0 . . . 5.59 80.36 23 5.2 No 64 1.73 Yes 0 0 No -20 0.79 Yes 44 80.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108139597 + NM_000051 ATM 0 . . . 5.36 78.34 25 5 No 75 -3.56 No 0 0 No -24 0.53 No 46 85.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190656560 + NM_000534 PMS1 0 . . . 1.76 67.43 21 5 No 57 0.26 No 0 0 No -20 0.76 Yes 49 15.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108171317 + NM_000051 ATM 0 . . . 2.69 81.69 17 4.8 No 24 0.9 Yes 0 0 No -16 0.48 No 34 71.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68785524 + NM_004360 CDH1 0 . . . 0.14 84.22 22 6.38 Yes 76 1.49 Yes 0 0 No -21 0.71 Yes 50 45.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68464169 + NM_133509 RAD51B 0 . . . 4.16 0 14 4.65 No 10 0.92 Yes 0 0 No -21 0.89 Yes 48 77.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59867688 - NM_032043 BRIP1 0 . . . 5.74 82.31 19 4.82 No 59 1.19 Yes 0 0 No -23 0.46 No 43 47.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32951871 + NM_000059 BRCA2 0 . . . 7.65 76.21 28 5.2 No -3 0.78 Yes 0 0 No -28 0.47 No 43 52.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59814094 - NM_032043 BRIP1 0 . . . 2.42 68.92 36 6.08 Yes 56 0.56 No 0 0 No -36 0.6 No 44 92.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1212105 + NM_000455 STK11 0 . . . 3.13 70.04 20 4.8 No 72 -4.58 No 0 0 No -22 0.56 No 35 70.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84404091 - NM_139076 FAM175A 0 . . . 6.15 80.57 26 4.5 No 6 0.53 No 0 0 No -25 0.89 Yes 41 88.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47749364 + NM_000251 MSH2 0 . . . 7.84 79.29 33 5.82 Yes 1 0.42 No 0 0 No -22 0.64 No 48 41.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108204070 + NM_000051 ATM 0 . . . 6.61 81.51 18 4.56 No 25 0.8 Yes 0 0 No -21 0.4 No 48 44.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75498586 - NM_001040108 MLH3 0 . . . 6.75 85.47 21 4.93 No -3 1.14 Yes 0 0 No -20 0.57 No 45 91.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75509215 - NM_001040108 MLH3 0 . . . 4.46 73.9 31 5.04 No 18 0.28 No 23 0.4 Yes -25 0.7 Yes 48 55.16 No BPP: No, SVM: No, Branch: Yes, LB: Yes, RNABPS: No chr11 108094527 + NM_000051 ATM 0 . . . 0.71 71.59 15 5.1 No 30 1.18 Yes 0 0 No -31 0.24 No 49 68.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59912951 - NM_032043 BRIP1 0 . . . 0.93 69.8 35 7.73 Yes 21 1.59 Yes 0 0 No -34 0.91 Yes 37 84.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68955603 + NM_133509 RAD51B 0 . . . 3.3 80.35 27 5.2 No 3 1.09 Yes 0 0 No -53 0.56 No 30 67.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68370452 + NM_133509 RAD51B 0 . . . 3.05 76.5 17 4.46 No 56 1.21 Yes 0 0 No -16 0.57 No 52 86.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68902332 + NM_133509 RAD51B 0 . . . 3.69 85.16 18 4.44 No 42 0.47 No 0 0 No -48 0.44 No 35 49.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89646174 + NM_000314 PTEN 0 . . . 10.18 79.5 23 4.9 No 66 0.89 Yes 0 0 No -22 0.95 Yes 42 77.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190658505 + NM_000534 PMS1 0 . . . 5.56 85.95 27 5.39 No 28 0.51 No 0 0 No -26 0.87 Yes 51 88.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68432724 + NM_133509 RAD51B 0 . . . 2.58 70.85 32 5.71 Yes 39 -2.65 No 0 0 No -23 0.48 No 43 77.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59848293 - NM_032043 BRIP1 0 . . . 3.21 66.15 26 6.47 Yes 26 0.66 No 0 0 No -25 0.78 Yes 44 69.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47797994 + NM_000251 MSH2 0 . . . 2.17 66.5 49 4.9 No 33 -2.88 No 0 0 No -22 0.51 No 49 33.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6049336 - NM_000535 PMS2 0 . . . 2.89 68.34 53 7.36 Yes 23 1.56 Yes 0 0 No -40 0.51 No 40 67.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23636490 - NM_024675 PALB2 0 . . . 4.27 92.4 29 4.35 No 4 1.04 Yes 0 0 No -21 0.64 No 54 71.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68812190 + NM_133509 RAD51B 0 . . . 2.92 72.41 17 4.8 No 38 0.47 No 0 0 No -25 0.45 No 47 90.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29138064 - NM_001005735 CHEK2 0 . . . 2.73 61.96 24 5.38 No NA NA NA 0 0 No -23 0.92 Yes 48 24.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59915320 - NM_032043 BRIP1 0 . . . 3.78 59.02 40 6.78 Yes 37 0.81 Yes 0 0 No -39 0.84 Yes 48 69.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32891508 + NM_000059 BRCA2 0 . . . 3.7 65.99 24 5.51 No 58 0.92 Yes 0 0 No -34 0.68 Yes 35 53.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59783748 - NM_032043 BRIP1 0 . . . 1.38 59.77 15 4.58 No 24 -3.58 No 0 0 No -32 0.56 No 41 36.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68602417 + NM_133509 RAD51B 0 . . . 2.58 74.07 48 13.93 Yes 65 0.85 Yes 0 0 No -27 0.26 No 55 34.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69086050 + NM_133509 RAD51B 0 . . . 1.13 67.92 36 6.34 Yes 35 1.6 Yes 0 0 No -25 0.68 Yes 23 49.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47719177 + NM_000251 MSH2 0 . . . 1.17 73.45 19 4.51 No 72 0.12 No 0 0 No -24 0.69 Yes 53 57.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59784313 - NM_032043 BRIP1 0 . . . 1.94 68.53 36 6.32 Yes -2 0.13 No 0 0 No -35 0.9 Yes 53 29.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32932208 + NM_000059 BRCA2 0 . . . 0.51 62.72 32 5.81 Yes 65 1.13 Yes 0 0 No -25 0.45 No 44 37.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68823594 + NM_004360 CDH1 0 . . . 4.25 71.97 15 4.56 No -3 1.72 Yes 0 0 No -21 0.81 Yes 17 37.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68801083 + NM_004360 CDH1 0 . . . 8.2 78.07 26 7.09 Yes 15 0.52 No 0 0 No -25 0.31 No 44 51.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47785109 + NM_000251 MSH2 0 . . . 6.16 90.17 25 4.9 No 46 0.66 No 0 0 No -27 0.87 Yes 30 44.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69049450 + NM_133509 RAD51B 0 . . . 3.91 68.42 27 5.2 No 48 0.18 No 0 0 No -26 0.43 No 48 54.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68757103 + NM_133509 RAD51B 0 . . . 7.1 87.71 18 4.38 No 63 0.87 Yes 0 0 No -17 0.79 Yes 50 83.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59900488 - NM_032043 BRIP1 0 . . . 2.48 78.68 36 5.92 Yes 1 1.35 Yes 0 0 No -35 0.49 No 50 61.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59875840 - NM_032043 BRIP1 0 . . . 0.11 67.47 30 6.32 Yes 39 0.68 No 0 0 No -29 0.89 Yes 51 59.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68452112 + NM_133509 RAD51B 0 . . . 1.72 73.49 18 4.7 No -4 0.18 No 0 0 No -39 0.66 No 62 36.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68601961 + NM_133509 RAD51B 0 . . . 0.29 0 34 7.52 Yes 69 1.57 Yes 0 0 No -33 0.58 No 46 81.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1229061 + NM_000455 STK11 0 . . . 2.36 62.48 30 5.57 Yes 29 0.54 No 0 0 No -30 0.46 No 57 27.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32967714 + NM_000059 BRCA2 0 . . . 2.92 68.21 10 4.49 No 61 0.87 Yes 0 0 No -37 0.22 No 33 77.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6038544 - NM_000535 PMS2 0 . . . 6.1 81.85 15 5.92 Yes 9 1.12 Yes 0 0 No -28 0.59 No 49 92.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59805854 - NM_032043 BRIP1 0 . . . 7.8 80.92 34 7.12 Yes 9 0.7 No 0 0 No -33 0.95 Yes 49 84.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47738140 + NM_000251 MSH2 0 . . . 1.11 62.77 16 5.06 No 53 1.22 Yes 0 0 No -44 0.73 Yes 25 45.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68743195 + NM_133509 RAD51B 0 . . . 1 68.37 42 8.52 Yes 59 0.92 Yes 0 0 No -41 0.77 Yes 48 68.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68917679 + NM_133509 RAD51B 0 . . . 4.63 77.8 21 5.2 No 50 0.66 No 0 0 No -20 0.7 Yes 49 51.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32938202 + NM_000059 BRCA2 0 . . . 0.43 68.05 25 5.18 No 34 0.75 No 0 0 No -24 0.52 No 40 94.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89718960 + NM_000314 PTEN 0 . . . 3.07 70.38 16 4.69 No 5 0.23 No 0 0 No -21 0.54 No 53 69.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59759992 - NM_032043 BRIP1 0 . . . 6.97 79.26 34 5.75 Yes 13 0.59 No 0 0 No -33 0.78 Yes 45 77.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32971387 + NM_000059 BRCA2 0 . . . 8.24 85.2 29 5.39 No 32 -3.6 No 0 0 No -26 0.57 No 43 51.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108202352 + NM_000051 ATM 0 . . . 1.29 69.78 16 4.43 No 26 0.76 No 0 0 No -25 0.9 Yes 32 49.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84386748 - NM_139076 FAM175A 0 . . . 1.45 78.36 28 5.38 No 33 1.04 Yes 0 0 No -27 0.59 No 25 66.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68522023 + NM_133509 RAD51B 0 . . . 6.45 69.69 21 5 No 67 0.65 No 0 0 No -20 0.41 No 42 39.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29099376 - NM_001005735 CHEK2 0 . . . 0.24 65.45 21 4.69 No 37 1.21 Yes 0 0 No -20 0.9 Yes 21 87.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47684827 + NM_000251 MSH2 0 . . . 5.79 77.04 21 4.69 No 39 -2.06 No 0 0 No -21 0.58 No 49 65.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94210886 - NM_005591 MRE11 0 . . . 5.53 81.16 33 5.63 Yes 9 1.27 Yes 0 0 No -23 0.42 No 49 63.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21980592 - NM_000077 CDKN2A 0 . . . 1.14 66.7 20 6.48 Yes 30 0.46 No 0 0 No -19 0.56 No 32 69.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69033107 + NM_133509 RAD51B 0 . . . 2.62 72.85 14 5.3 No 6 1.44 Yes 0 0 No -27 0.29 No 52 61.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45800241 - NM_001048171 MUTYH 0 . . . 0.3 72.37 25 5.09 No 75 -3.66 No 0 0 No -24 0.78 Yes 48 45.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68635502 + NM_133509 RAD51B 0 . . . 0.96 67.7 38 5.17 No 33 1.34 Yes 0 0 No -22 0.3 No 57 32.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68843449 + NM_004360 CDH1 0 . . . 0.57 83 34 6.03 Yes 59 -1.91 No 0 0 No -37 0.67 Yes 36 90.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68578197 + NM_133509 RAD51B 0 . . . 8.26 82.23 41 7.03 Yes 18 0.25 No 0 0 No -23 0.72 Yes 40 93.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190742837 + NM_000534 PMS1 0 . . . 1.88 86.31 13 5.1 No 33 1.13 Yes 0 0 No -21 0.46 No 51 42.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33438289 - NM_002878 RAD51D 0 . . . 3.06 66.46 20 4.48 No 16 1.41 Yes 0 0 No -48 0.71 Yes 42 90.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90976784 - NM_002485 NBN 0 . . . 0.39 61.39 19 4.64 No 46 0.07 No 0 0 No -22 0.75 Yes 46 47.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68509849 + NM_133509 RAD51B 0 . . . 1.94 79.05 30 5.29 No 22 0.43 No 0 0 No -29 0.76 Yes 48 58.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68417768 + NM_133509 RAD51B 0 . . . 3.45 77 27 5.48 No 70 -6.14 No 0 0 No -26 0.94 Yes 50 87.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29124222 - NM_001005735 CHEK2 0 . . . 7.52 75.34 27 5.05 No 1 1.03 Yes 0 0 No -26 0.77 Yes 45 70.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215639247 - NM_000465 BARD1 0 . . . 2.45 80.22 39 6.46 Yes 24 0.81 Yes 0 0 No -25 0.72 Yes 18 56.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56770103 + NM_058216 RAD51C 0 . . . 4.12 72.65 29 4.43 No 42 0.52 No 0 0 No -31 0.49 No 46 45.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68852262 + NM_133509 RAD51B 0 . . . 3.89 78.02 27 6.6 Yes 66 1.37 Yes 0 0 No -27 0.42 No 49 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108191089 + NM_000051 ATM 0 . . . 0.35 67.54 17 5.63 Yes 66 1.25 Yes 0 0 No -33 0.81 Yes 28 65.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37042629 + NM_000249 MLH1 0 . . . 5.76 75.89 37 5.8 Yes 28 0.85 Yes 0 0 No -36 0.72 Yes 42 78.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94213634 - NM_005591 MRE11 0 . . . 3.86 75.03 17 5.36 No 43 1.34 Yes 0 0 No -21 0.58 No 46 62.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6017500 - NM_000535 PMS2 0 . . . 0.12 0 13 7.01 Yes 26 1.07 Yes 0 0 No -26 0.33 No 32 33.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68435481 + NM_133509 RAD51B 0 . . . 0.02 78.75 15 5.19 No 52 -1.88 No 0 0 No -28 0.21 No 42 63.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41022172 + NM_001164269 RAD51 0 . . . 4.35 69.76 28 6.32 Yes 11 -1.88 No 0 0 No -27 0.5 No 47 35.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48028601 + NM_000179 MSH6 0 . . . 3.79 85.66 24 5.29 No 23 0.23 No 0 0 No -23 0.9 Yes 54 39.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131929809 + NM_005732 RAD50 0 . . . 4.1 81.38 17 5.57 Yes 18 0.17 No 0 0 No -24 0.68 Yes 40 62.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21975766 - NM_000077 CDKN2A 0 . . . 8.1 89.97 19 4.66 No 7 1.22 Yes 0 0 No -30 0.62 No 51 79.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52440531 - NM_004656 BAP1 0 . . . 1.65 59.01 16 5.16 No 57 -3.94 No 0 0 No -25 0.52 No 47 51.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68818619 + NM_004360 CDH1 0 . . . 5 73.53 19 5.48 No 60 2.19 Yes 0 0 No -18 0.58 No 37 84.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108125010 + NM_000051 ATM 0 . . . 7.18 81.26 26 4.99 No 1 0.6 No 0 0 No -25 0.79 Yes 47 71.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89637501 + NM_000314 PTEN 0 . . . 2.06 74.17 30 5.74 Yes 69 -5.9 No 0 0 No -29 0.94 Yes 55 39.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69050262 + NM_133509 RAD51B 0 . . . 1.37 64.92 16 4.69 No 33 0.52 No 0 0 No -49 0.53 No 50 43.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68357760 + NM_133509 RAD51B 0 . . . 6.83 76.36 27 5.39 No 45 0.41 No 0 0 No -58 0.85 Yes 44 37.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69029297 + NM_133509 RAD51B 0 . . . 6.76 79.3 29 6.85 Yes 10 1.87 Yes 0 0 No -28 0.83 Yes 48 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23635640 - NM_024675 PALB2 0 . . . 4.11 75.38 31 5.43 No 4 0.16 No 0 0 No -23 0.79 Yes 32 51.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56774335 + NM_058216 RAD51C 0 . . . 0.97 72.1 36 6.4 Yes 58 0.53 No 0 0 No -35 0.91 Yes 58 45.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59756432 - NM_032043 BRIP1 0 . . . 1.77 66.05 14 5.83 Yes 52 0.32 No 0 0 No -47 0.35 No 41 57.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6011634 - NM_000535 PMS2 0 . . . 5.5 90.92 28 6.16 Yes 45 0.48 No 0 0 No -27 0.89 Yes 13 56.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68599914 + NM_133509 RAD51B 0 . . . 4.56 86.76 28 5.83 Yes 71 -4.72 No 0 0 No -59 0.57 No 52 53.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41020764 + NM_001164269 RAD51 0 . . . 5.14 70.16 21 3.65 No 1 0.18 No 0 0 No -21 0.4 No 45 97.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21975874 - NM_000077 CDKN2A 0 . . . 0.46 78.17 26 6.02 Yes 39 1.19 Yes 0 0 No -35 0.45 No 19 53.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68995582 + NM_133509 RAD51B 0 . . . 3.33 77.35 22 6.52 Yes 18 0.66 No 0 0 No -21 0.7 Yes 48 52.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59925670 - NM_032043 BRIP1 0 . . . 0.05 0 28 5.48 No 62 -3.88 No 0 0 No -27 0.82 Yes 54 49.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190740430 + NM_000534 PMS1 0 . . . 0.32 74.68 16 5.24 No 12 0.63 No 0 0 No -21 0.69 Yes 46 92.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41024614 + NM_001164269 RAD51 0 . . . 5.81 93.18 22 5.13 No 3 0.26 No 0 0 No -29 0.35 No 43 58.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68828931 + NM_004360 CDH1 0 . . . 4.61 86.29 25 5.02 No 15 1.69 Yes 0 0 No -28 0.59 No 43 96.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90974349 - NM_002485 NBN 0 . . . 4.1 66.55 24 4.76 No 45 0.68 No 0 0 No -29 0.77 Yes 43 80.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68770981 + NM_133509 RAD51B 0 . . . 1.63 82.98 16 3.52 No 54 0.11 No 0 0 No -24 0.92 Yes 47 61.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68586636 + NM_133509 RAD51B 0 . . . 1.28 55.22 27 5.38 No 10 0.25 No 0 0 No -24 0.78 Yes 48 70.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68287789 + NM_133509 RAD51B 0 . . . 5.37 81.53 25 5.37 No -3 1.07 Yes 0 0 No -28 0.48 No 48 74.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108159994 + NM_000051 ATM 0 . . . 3.01 85.24 47 7.14 Yes 8 0.09 No 0 0 No -46 0.41 No 41 92.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47799881 + NM_000251 MSH2 0 . . . 6.23 94.73 45 7.07 Yes 68 -0.82 No 0 0 No -28 0.65 No 48 46.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29103739 - NM_001005735 CHEK2 0 . . . 2.48 70.18 28 4.76 No 51 0.37 No 0 0 No -27 0.81 Yes 45 65.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68493742 + NM_133509 RAD51B 0 . . . 0.02 0 37 5.21 No 44 1.23 Yes 0 0 No -31 0.85 Yes 14 63.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68492999 + NM_133509 RAD51B 0 . . . 3.85 67.81 22 5.1 No 25 0.91 Yes 0 0 No -19 0.46 No 44 66.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68624335 + NM_133509 RAD51B 0 . . . 1.59 77.05 14 5.57 Yes 76 0.49 No 0 0 No -24 0.62 No 47 29.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68868456 + NM_004360 CDH1 0 . . . 4.27 73.73 25 5 No 2 0.45 No 0 0 No -22 0.7 Yes 44 78.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94155324 - NM_005591 MRE11 0 . . . 9 83.46 17 7.46 Yes 76 1.28 Yes 0 0 No -16 0.5 No 40 78.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68687728 + NM_133509 RAD51B 0 . . . 1.13 63.6 23 4.8 No 47 0.65 No 0 0 No -22 0.74 Yes 42 46.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68686569 + NM_133509 RAD51B 0 . . . 2.49 77.62 45 6.05 Yes -3 0.15 No 0 0 No -26 0.68 Yes 41 41.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41256048 - NM_007294 BRCA1 0 . . . 3.13 80.08 12 4.69 No 76 2.05 Yes 0 0 No -48 0.31 No 17 10.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6036892 - NM_000535 PMS2 0 . . . 3.58 84.59 28 3.79 No 6 0.66 No 0 0 No -25 0.82 Yes 52 71.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21991662 - NM_000077 CDKN2A 0 . . . 3.83 73.91 12 5.57 Yes 18 0.07 No 0 0 No -22 0.63 No 47 94.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69025521 + NM_133509 RAD51B 0 . . . 2.6 63.34 26 5.96 Yes 48 0.91 Yes 0 0 No -25 0.85 Yes 38 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108144253 + NM_000051 ATM 0 . . . 6.82 85.51 26 5.22 No 7 1.13 Yes 0 0 No -26 0.44 No 51 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47760172 + NM_000251 MSH2 0 . . . 0.46 83 32 5.89 Yes 65 0.7 No 0 0 No -35 0.48 No 44 90.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68457218 + NM_133509 RAD51B 0 . . . 0.86 55.12 25 5 No 57 1.36 Yes 0 0 No -50 0.49 No 56 35.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152361724 - NM_005431 XRCC2 0 . . . 2.09 69.58 22 4.78 No 61 -4.13 No 0 0 No -21 0.96 Yes 44 23.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131970640 + NM_005732 RAD50 0 . . . 6.84 83.27 18 4.15 No 5 0.96 Yes 0 0 No -20 0.4 No 49 79.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45800835 - NM_001048171 MUTYH 0 . . . 3.63 68.6 18 4.58 No 70 -4.76 No 0 0 No -17 0.71 Yes 48 97.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90955797 - NM_002485 NBN 0 . . . 1.16 72.67 27 6.25 Yes 25 0.4 No 0 0 No -26 0.72 Yes 44 64.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68849888 + NM_004360 CDH1 0 . . . 1.62 0 17 5.57 Yes 17 1.44 Yes 0 0 No -16 0.69 Yes 41 90.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59764663 - NM_032043 BRIP1 0 . . . 6.52 69.5 16 4.69 No 27 0.67 No 0 0 No -28 0.51 No 40 61.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89727903 + NM_000314 PTEN 0 . . . 1.2 67.44 30 7.89 Yes 24 -3.69 No 0 0 No -29 0.7 Yes 44 95.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68687897 + NM_133509 RAD51B 0 . . . 6.86 81.16 27 6.08 Yes 64 -4.06 No 0 0 No -24 0.69 Yes 42 55.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68452419 + NM_133509 RAD51B 0 . . . 3.9 83.27 15 4.58 No 46 -1.34 No 0 0 No -18 0.45 No 54 38.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37092720 + NM_000249 MLH1 0 . . . 2.24 80.12 29 5.28 No 7 1.16 Yes 0 0 No -28 0.63 No 51 80.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68895897 + NM_133509 RAD51B 0 . . . 3.04 62.9 98 9.2 Yes 28 0.35 No 0 0 No -34 0.5 No 42 68.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68404691 + NM_133509 RAD51B 0 . . . 4.62 81.57 21 5.02 No 69 1.42 Yes 0 0 No -29 0.42 No 47 87.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68433373 + NM_133509 RAD51B 0 . . . 0.37 67.25 19 5.83 Yes 66 0.76 No 0 0 No -18 0.56 No 49 80.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68575403 + NM_133509 RAD51B 0 . . . 3.98 68.56 18 5.04 No 36 0.73 No 0 0 No -29 0.39 No 49 43.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108192570 + NM_000051 ATM 0 . . . 5.97 80.05 44 7.61 Yes 45 -1.24 No 0 0 No -37 0.6 No 41 51.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41198844 - NM_007294 BRCA1 0 . . . 7.14 85.83 10 4 No 48 -3.31 No 0 0 No -27 0.55 No 44 64.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37094172 + NM_000249 MLH1 0 . . . 1.23 0 25 7.29 Yes 5 0.56 No 0 0 No -24 0.64 No 42 92.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59913187 - NM_032043 BRIP1 0 . . . 6.27 74.48 20 3.67 No 9 1.09 Yes 0 0 No -25 0.5 No 49 90.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68816189 + NM_004360 CDH1 0 . . . 5.15 87.95 39 6.5 Yes 36 -1.6 No 0 0 No -17 0.29 No 37 73.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90981290 - NM_002485 NBN 0 . . . 7.38 92.04 42 6.78 Yes 54 0.75 No 0 0 No -41 0.36 No 43 81.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59931863 - NM_032043 BRIP1 0 . . . 0.13 0 22 5.29 No 45 1.17 Yes 0 0 No -21 0.55 No 13 51.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68591043 + NM_133509 RAD51B 0 . . . 4.36 75.24 23 3.3 No 8 0.8 Yes 0 0 No -22 0.61 No 49 62.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94217443 - NM_005591 MRE11 0 . . . 1.69 79.77 54 7.28 Yes 48 1.26 Yes 0 0 No -44 0.38 No 43 58.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47741770 + NM_000251 MSH2 0 . . . 3.68 83.14 48 6.93 Yes 47 1.15 Yes 0 0 No -24 0.37 No 16 63.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89629145 + NM_000314 PTEN 0 . . . 1.36 69.89 37 6.56 Yes 12 -2.25 No 0 0 No -36 0.86 Yes 48 61.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94228780 - NM_005591 MRE11 0 . . . 1.47 70.11 19 4.47 No 76 1.46 Yes 0 0 No -18 0.5 No 59 41.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48019495 + NM_000179 MSH6 0 . . . 7.26 78.66 39 6.18 Yes 5 0.6 No 0 0 No -38 0.36 No 53 77.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21971379 - NM_000077 CDKN2A 0 . . . 1.49 71.59 27 5.12 No 61 1.05 Yes 28 0.27 Yes -39 0.88 Yes 47 62.03 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68444733 + NM_133509 RAD51B 0 . . . 2.45 0 15 5.83 Yes -3 0.39 No 0 0 No -20 0.6 No 20 67.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59919061 - NM_032043 BRIP1 0 . . . 2.07 65.5 19 6.06 Yes 69 -3.01 No 0 0 No -18 0.56 No 39 75.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32962509 + NM_000059 BRCA2 0 . . . 2.19 83.52 27 6.19 Yes 76 1.17 Yes 0 0 No -26 0.78 Yes 50 88.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32892184 + NM_000059 BRCA2 0 . . . 4.91 78.6 30 5.8 Yes 7 0.53 No 0 0 No -30 0.63 No 51 60.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68700116 + NM_133509 RAD51B 0 . . . 2.6 73.21 14 5.19 No 6 1.26 Yes 0 0 No -27 0.82 Yes 30 61.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29120160 - NM_001005735 CHEK2 0 . . . 3.37 84.11 15 4.04 No 11 1.66 Yes 0 0 No -15 0.42 No 47 74.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68301327 + NM_133509 RAD51B 0 . . . 4.61 83.99 19 5 No 67 1.09 Yes 0 0 No -35 0.63 No 50 60.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69086718 + NM_133509 RAD51B 0 . . . 3.3 72.82 36 5.39 No 63 1.08 Yes 0 0 No -30 0.65 No 37 69.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56812167 + NM_058216 RAD51C 0 . . . 0.07 63.07 43 5.87 Yes 34 1.2 Yes 0 0 No -21 0.28 No 24 77.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47628935 + NM_000251 MSH2 0 . . . 2.81 85.02 38 6.08 Yes 4 1.17 Yes 0 0 No -30 0.68 Yes 44 81.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29124740 - NM_001005735 CHEK2 0 . . . 8.61 90.4 22 5.1 No 72 1.17 Yes 0 0 No -21 0.86 Yes 50 45.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32973040 + NM_000059 BRCA2 0 . . . 3.39 74.14 32 6.45 Yes 72 -6.62 No 0 0 No -31 0.68 Yes 51 61.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68317730 + NM_133509 RAD51B 0 . . . 0.16 0 23 5.39 No 49 1.14 Yes 0 0 No -22 0.87 Yes 51 80.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68705760 + NM_133509 RAD51B 0 . . . 2.78 71.51 20 6.68 Yes 7 0.34 No 0 0 No -19 0.35 No 51 52.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47778748 + NM_000251 MSH2 0 . . . 1.92 55.27 27 5.42 No 48 0.36 No 0 0 No -26 0.83 Yes 38 50.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48023345 + NM_000179 MSH6 0 . . . 3.09 72.93 18 4.8 No 60 0.65 No 0 0 No -46 0.58 No 48 37.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89675447 + NM_000314 PTEN 0 . . . 1.5 76.48 13 5.48 No 20 0.49 No 0 0 No -23 0.32 No 38 45.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68819955 + NM_133509 RAD51B 0 . . . 0.77 63.43 28 6.84 Yes 51 -3.76 No 0 0 No -28 0.6 No 50 48.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68370101 + NM_133509 RAD51B 0 . . . 2.04 76.71 17 4.67 No 8 1.22 Yes 0 0 No -26 0.56 No 50 71.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68835284 + NM_133509 RAD51B 0 . . . 1.65 73.32 29 6.73 Yes 15 0.53 No 0 0 No -28 0.71 Yes 43 66.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108103691 + NM_000051 ATM 0 . . . 0.73 65.32 16 5.13 No 16 1.09 Yes 0 0 No -24 0.46 No 42 86.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131979185 + NM_005732 RAD50 0 . . . 6.72 73.92 19 4.42 No 57 -3.16 No 0 0 No -19 0.71 Yes 42 62.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131926048 + NM_005732 RAD50 0 . . . 2.01 74.68 20 5.57 Yes 53 0.63 No 0 0 No -19 0.72 Yes 36 61.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59921779 - NM_032043 BRIP1 0 . . . 7.73 86.87 23 4.68 No 12 1.24 Yes 0 0 No -23 0.64 No 46 92.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68957689 + NM_133509 RAD51B 0 . . . 2.09 65.87 36 6.08 Yes -3 0.37 No 0 0 No -35 0.52 No 46 45.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59858085 - NM_032043 BRIP1 0 . . . 0.7 82.2 17 4.16 No 36 1.35 Yes 0 0 No -43 0.82 Yes 34 44.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47658250 + NM_000251 MSH2 0 . . . 6.71 76.37 38 6.32 Yes 66 -4.53 No 0 0 No -22 0.46 No 41 53.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89665363 + NM_000314 PTEN 0 . . . 2.26 0 16 3.05 No 43 0.44 No 0 0 No -28 0.85 Yes 41 31.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59920711 - NM_032043 BRIP1 0 . . . 1.77 63.09 20 6.46 Yes 35 0.57 No 0 0 No -38 0.78 Yes 15 95.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69121183 + NM_133509 RAD51B 0 . . . 0.69 64.83 11 5 No 73 1.44 Yes 0 0 No -46 0.71 Yes 16 35.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68938353 + NM_133509 RAD51B 0 . . . 3.62 72.3 25 5.57 Yes 13 0.55 No 0 0 No -24 0.46 No 45 93.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215671881 - NM_000465 BARD1 0 . . . 6.37 84.67 24 4.48 No 22 0.94 Yes 0 0 No -23 0.86 Yes 42 57.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94188491 - NM_005591 MRE11 0 . . . 2.75 81.74 11 5.66 Yes 44 -3.74 No 0 0 No -30 0.55 No 46 64.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105201298 + NM_021930 RINT1 0 . . . 0.55 0 29 6.39 Yes 45 1.17 Yes 0 0 No -28 0.74 Yes 38 52.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104172160 - NM_001100119 XRCC3 0 . . . 5.14 83.71 26 5.35 No 12 0.63 No 0 0 No -21 0.59 No 46 85.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131980465 + NM_005732 RAD50 0 . . . 5.51 82.49 25 5.1 No 10 1.27 Yes 0 0 No -27 0.57 No 48 92.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69132557 + NM_133509 RAD51B 0 . . . 6.91 80.03 36 5.79 Yes 74 1.42 Yes 0 0 No -25 0.78 Yes 25 51.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190705794 + NM_000534 PMS1 0 . . . 4.5 71.9 36 5.99 Yes 10 0.86 Yes 0 0 No -32 0.52 No 48 66.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69083434 + NM_133509 RAD51B 0 . . . 1.35 66.14 31 6.53 Yes 45 0.59 No 0 0 No -24 0.37 No 22 82.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29121998 - NM_001005735 CHEK2 0 . . . 1.96 78.07 22 5.83 Yes 34 1.05 Yes 0 0 No -21 0.79 Yes 24 67.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45806352 - NM_001048171 MUTYH 0 . . . 6.34 75.1 44 3.49 No 0 0.21 No 0 0 No -24 0.65 No 49 76.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47685408 + NM_000251 MSH2 0 . . . 7.76 80.51 42 4.59 No 37 1.29 Yes 0 0 No -31 0.7 Yes 44 82.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108234335 + NM_000051 ATM 0 . . . 2.18 70.11 13 4.36 No -2 0.39 No 0 0 No -29 0.56 No 51 37.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108135235 + NM_000051 ATM 0 . . . 1.21 75.55 58 7.07 Yes 70 -5.29 No 0 0 No -29 0.72 Yes 50 51.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47738945 + NM_000251 MSH2 0 . . . 1.86 0 20 5.83 Yes 64 -4.12 No 0 0 No -19 0.85 Yes 51 60.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59791503 - NM_032043 BRIP1 0 . . . 1.39 81.65 39 6.48 Yes 6 1.88 Yes 0 0 No -23 0.37 No 46 93.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69012162 + NM_133509 RAD51B 0 . . . 5.96 82.12 24 5.12 No 39 1.55 Yes 0 0 No -23 0.29 No 43 92.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108240812 + NM_000051 ATM 0 . . . 3.79 85.85 14 6.04 Yes 32 0.84 Yes 0 0 No -24 0.5 No 50 88.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37092771 + NM_000249 MLH1 0 . . . 6.21 82.31 20 5.1 No 58 1.16 Yes 0 0 No -19 0.6 No 54 55.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59807477 - NM_032043 BRIP1 0 . . . 7.43 83.45 23 5.39 No 64 0.35 No 0 0 No -44 0.77 Yes 48 76.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48014874 + NM_000179 MSH6 0 . . . 2.2 80.65 16 4.69 No 3 0.81 Yes 0 0 No -24 0.58 No 50 80.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59899793 - NM_032043 BRIP1 0 . . . 0.42 62.93 12 4.24 No 71 0.74 No 0 0 No -37 0.78 Yes 61 28.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68324176 + NM_133509 RAD51B 0 . . . 8.19 86.13 20 5.47 No -3 0.93 Yes 0 0 No -19 0.38 No 46 75.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68832591 + NM_004360 CDH1 0 . . . 0.61 65.65 30 7.27 Yes 14 0.91 Yes 0 0 No -29 0.87 Yes 33 65.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69042555 + NM_133509 RAD51B 0 . . . 2.74 62.27 19 6.28 Yes 30 1.14 Yes 0 0 No -18 0.51 No 40 65.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190649414 + NM_000534 PMS1 0 . . . 2 66.67 20 3.62 No 66 1.68 Yes 0 0 No -22 0.92 Yes 22 44.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68358004 + NM_133509 RAD51B 0 . . . 5.31 73.67 30 6.31 Yes 17 0.31 No 0 0 No -29 0.79 Yes 41 88.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105195004 + NM_021930 RINT1 0 . . . 2.53 86.06 30 5.23 No 76 1.48 Yes 0 0 No -22 0.57 No 51 38.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68676861 + NM_133509 RAD51B 0 . . . 2.24 80.12 33 6.1 Yes 7 1.02 Yes 0 0 No -35 0.54 No 51 82.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131914894 + NM_005732 RAD50 0 . . . 3.67 69.27 21 4.68 No -3 1.07 Yes 0 0 No -20 0.91 Yes 61 36.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68304279 + NM_133509 RAD51B 0 . . . 4.91 0 20 5.1 No 60 0.5 No 0 0 No -48 0.44 No 35 84.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68561660 + NM_133509 RAD51B 0 . . . 1.86 85.8 30 4.32 No 48 0.86 Yes 0 0 No -29 0.49 No 44 79.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108165490 + NM_000051 ATM 0 . . . 2.43 71.66 13 4.77 No 0 -1.88 No 0 0 No -20 0.86 Yes 46 80.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108192485 + NM_000051 ATM 0 . . . 1.46 71.47 19 4.93 No 71 -5.7 No 0 0 No -18 0.61 No 44 74.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108123390 + NM_000051 ATM 0 . . . 9.85 79.49 47 7 Yes 21 0.57 No 0 0 No -31 0.48 No 37 78.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68439967 + NM_133509 RAD51B 0 . . . 8.72 87.06 23 5.39 No 72 1.01 Yes 0 0 No -22 0.84 Yes 43 90.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105193305 + NM_021930 RINT1 0 . . . 1.38 73.6 54 9.64 Yes 7 0.88 Yes 0 0 No -53 0.55 No 51 85.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68819751 + NM_004360 CDH1 0 . . . 6.27 73.43 45 7.14 Yes 33 1.34 Yes 0 0 No -31 0.54 No 25 63.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32904414 + NM_000059 BRCA2 0 . . . 4.55 72.65 21 5.2 No 36 0.98 Yes 0 0 No -34 0.28 No 22 73.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190743197 + NM_000534 PMS1 0 . . . 2.92 69.11 35 6.21 Yes 13 1.47 Yes 0 0 No -30 0.93 Yes 45 97.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47800061 + NM_000251 MSH2 0 . . . 2.72 72.06 20 4.48 No 59 -4.49 No 0 0 No -19 0.76 Yes 33 84.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47683076 + NM_000251 MSH2 0 . . . 0.54 67.23 25 5.32 No 56 0.99 Yes 0 0 No -24 0.93 Yes 40 31.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48012148 + NM_000179 MSH6 0 . . . 2.24 80.12 27 6.16 Yes 7 1.16 Yes 0 0 No -26 0.8 Yes 51 84.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108212216 + NM_000051 ATM 0 . . . 10.71 82.15 47 8.94 Yes 16 0.7 No 0 0 No -41 0.48 No 42 98.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68967456 + NM_133509 RAD51B 0 . . . 7.53 87.15 13 4.75 No 9 0.93 Yes 0 0 No -20 0.39 No 48 70.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59758563 - NM_032043 BRIP1 0 . . . 1.45 0 27 4.55 No 43 1.05 Yes 0 0 No -26 0.73 Yes 43 92.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68907434 + NM_133509 RAD51B 0 . . . 4.8 81.37 29 6.32 Yes 58 -3.88 No 0 0 No -24 0.82 Yes 47 58.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32931103 + NM_000059 BRCA2 0 . . . 2.56 79.11 47 6.09 Yes 20 0.82 Yes 0 0 No -28 0.37 No 49 49.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69149790 + NM_133509 RAD51B 0 . . . 8.17 94.29 16 4.73 No 24 0.53 No 0 0 No -21 0.88 Yes 46 64.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68754585 + NM_133509 RAD51B 0 . . . 6.16 78.54 42 6.12 Yes 40 1.18 Yes 0 0 No -31 0.67 Yes 47 74.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68942541 + NM_133509 RAD51B 0 . . . 7.81 84.85 62 6.91 Yes 33 0.05 No 0 0 No -27 0.55 No 52 62.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891755 + NM_133509 RAD51B 0 . . . 1.98 0 36 6.84 Yes 13 0.89 Yes 0 0 No -35 0.93 Yes 40 77.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68856074 + NM_004360 CDH1 0 . . . 6.06 83.85 26 5.32 No 24 1.07 Yes 0 0 No -47 0.42 No 38 56.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89722420 + NM_000314 PTEN 0 . . . 4.39 71.72 22 5.23 No 5 0.63 No 0 0 No -24 0.4 No 53 63.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32939094 + NM_000059 BRCA2 0 . . . 1.65 74.81 16 4.52 No 35 0.06 No 0 0 No -46 0.62 No 52 36.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47788193 + NM_000251 MSH2 0 . . . 2.02 81.67 32 7.07 Yes -3 0.4 No 0 0 No -31 0.68 Yes 51 79.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29109544 - NM_001005735 CHEK2 0 . . . 2.31 71.02 42 7.54 Yes 61 -3.84 No 0 0 No -41 0.4 No 48 49.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68991447 + NM_133509 RAD51B 0 . . . 3.19 0 21 5.83 Yes 23 0.45 No 0 0 No -21 0.77 Yes 40 63.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48028500 + NM_000179 MSH6 0 . . . 7.59 84.17 30 5.83 Yes 29 0.15 No 0 0 No -29 0.57 No 46 84.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69087474 + NM_133509 RAD51B 0 . . . 9.04 84.69 17 4.17 No 51 1.36 Yes 0 0 No -41 0.36 No 39 72.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68989873 + NM_133509 RAD51B 0 . . . 0.16 0 19 4.98 No 0 0.17 No 0 0 No -27 0.64 No 37 49.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215632680 - NM_000465 BARD1 0 . . . 7.41 77.95 14 4.47 No 8 0.36 No 0 0 No -36 0.48 No 49 56.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69128021 + NM_133509 RAD51B 0 . . . 1.34 0 25 3.93 No 53 -1.81 No 0 0 No -24 0.8 Yes 43 33.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69075591 + NM_133509 RAD51B 0 . . . 7.09 78.03 39 6.19 Yes -3 0.2 No 0 0 No -20 0.67 Yes 34 84.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131897066 + NM_005732 RAD50 0 . . . 4.41 85.61 24 6.51 Yes 4 1.05 Yes 0 0 No -23 0.47 No 54 68.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59870850 - NM_032043 BRIP1 0 . . . 0.51 68.86 31 4.92 No 9 0.08 No 0 0 No -30 0.46 No 49 88.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48018001 + NM_000179 MSH6 0 . . . 6.1 91.5 12 5.39 No 60 0.92 Yes 0 0 No -28 0.34 No 38 80.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23633750 - NM_024675 PALB2 0 . . . 0.73 74.35 25 5.29 No 17 0.15 No 0 0 No -24 0.69 Yes 41 69.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68477414 + NM_133509 RAD51B 0 . . . 4.92 87.32 21 5.34 No 7 1.08 Yes 0 0 No -34 0.5 No 47 62.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7577814 - NM_000546 TP53 0 . . . 2.2 66.34 19 5.75 Yes 58 1.41 Yes 0 0 No -18 0.61 No 42 47.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94228703 - NM_005591 MRE11 0 . . . 1.37 61.3 15 5.09 No 14 0.99 Yes 0 0 No -25 0.64 No 44 86.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29107430 - NM_001005735 CHEK2 0 . . . 5.11 64.1 27 5.66 Yes 42 0.17 No 0 0 No -26 0.52 No 30 58.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105172903 + NM_021930 RINT1 0 . . . 1.1 60.2 46 8.71 Yes 40 -3.18 No 0 0 No -41 0.58 No 41 54.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68567149 + NM_133509 RAD51B 0 . . . 1.36 82.86 21 7.21 Yes 42 1.44 Yes 0 0 No -20 0.73 Yes 50 79.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215665626 - NM_000465 BARD1 0 . . . 3.91 76.95 41 7.48 Yes 41 1.25 Yes 0 0 No -40 0.64 No 50 69.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56804839 + NM_058216 RAD51C 0 . . . 1.64 77.95 22 5.1 No 2 1.29 Yes 0 0 No -21 0.78 Yes 36 78.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59889120 - NM_032043 BRIP1 0 . . . 0.42 74.73 25 5.53 No 33 1.2 Yes 0 0 No -27 0.85 Yes 25 52.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89692957 + NM_000314 PTEN 0 . . . 0.6 72.91 23 6.55 Yes 30 0.14 No 0 0 No -22 0.62 No 50 61.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68535365 + NM_133509 RAD51B 0 . . . 7.4 87.63 25 5.17 No 73 0.41 No 0 0 No -19 0.69 Yes 49 67.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94196005 - NM_005591 MRE11 0 . . . 4.18 70.73 33 5.83 Yes 17 1.56 Yes 0 0 No -25 0.72 Yes 41 96.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37034242 + NM_000249 MLH1 0 . . . 2.11 72.46 49 6.72 Yes 48 0.63 No 0 0 No -23 0.66 No 53 52.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152345391 - NM_005431 XRCC2 0 . . . 2.15 85.64 15 6.74 Yes 3 0.7 No 0 0 No -27 0.53 No 50 76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29132619 - NM_001005735 CHEK2 0 . . . 7.05 81.9 25 5.29 No 0 1.89 Yes 0 0 No -24 0.76 Yes 50 85.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68651146 + NM_133509 RAD51B 0 . . . 10.16 87.72 20 3.69 No 16 1.57 Yes 0 0 No -19 0.6 No 42 95.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68353070 + NM_133509 RAD51B 0 . . . 0.19 67.79 19 4.69 No 62 -3.83 No 0 0 No -18 0.74 Yes 38 88.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59867928 - NM_032043 BRIP1 0 . . . 1.72 60.92 30 6.34 Yes 61 -4.91 No 0 0 No -29 0.64 No 37 29.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59835748 - NM_032043 BRIP1 0 . . . 5.48 84.61 9 3.87 No 3 0.73 No 0 0 No -29 0.81 Yes 37 72.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68407986 + NM_133509 RAD51B 0 . . . 5.92 81.61 20 5.51 No -2 0.56 No 0 0 No -24 0.7 Yes 46 73.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68846796 + NM_133509 RAD51B 0 . . . 4.19 80.32 21 5.2 No 44 0.67 No 0 0 No -23 0.56 No 24 52.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108108374 + NM_000051 ATM 0 . . . 5.27 86.96 38 5.1 No 67 0.26 No 0 0 No -16 0.54 No 50 89.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68760768 + NM_133509 RAD51B 0 . . . 3.77 73.08 17 4.8 No 73 -5.67 No 0 0 No -35 0.65 No 53 30.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131976083 + NM_005732 RAD50 0 . . . 0.96 76.17 36 5.96 Yes 41 -1.92 No 0 0 No -25 0.55 No 39 74.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108105202 + NM_000051 ATM 0 . . . 4.13 81.45 22 4.8 No 5 0.54 No 0 0 No -21 0.97 Yes 36 48.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84404288 - NM_139076 FAM175A 0 . . . 1.91 0 25 4.97 No 4 1.03 Yes 0 0 No -20 0.3 No 54 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47772462 + NM_000251 MSH2 0 . . . 2.27 69.35 13 4.12 No 75 -6.03 No 0 0 No -28 0.74 Yes 46 35.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90957467 - NM_002485 NBN 0 . . . 2.02 70.72 28 5.79 Yes 2 1.7 Yes 0 0 No -27 0.56 No 41 89.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89726368 + NM_000314 PTEN 0 . . . 7.78 85.05 55 5.95 Yes 8 1.11 Yes 0 0 No -22 0.76 Yes 46 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32965028 + NM_000059 BRCA2 0 . . . 3.71 70.42 19 6.83 Yes 54 -3.94 No 0 0 No -26 0.4 No 47 72.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68775634 + NM_133509 RAD51B 0 . . . 2.46 66.82 32 5.74 Yes 67 1 Yes 0 0 No -47 0.46 No 42 39.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215593216 - NM_000465 BARD1 0 . . . 0.06 68.76 18 4.59 No 66 0.52 No 0 0 No -59 0.56 No 47 79.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68501372 + NM_133509 RAD51B 0 . . . 1.2 67.39 36 7.79 Yes 29 -3.83 No 0 0 No -35 0.93 Yes 33 47.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68852716 + NM_133509 RAD51B 0 . . . 2.14 73.96 48 8.3 Yes 60 0.66 No 0 0 No -47 0.58 No 44 32.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33446913 - NM_002878 RAD51D 0 . . . 0.56 0 12 4.8 No NA NA NA 26 0.78 Yes -20 0.37 No 31 25.22 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 7568620 - NM_000546 TP53 0 . . . 5.37 69.7 16 5.04 No 9 0.92 Yes 0 0 No -24 0.73 Yes 49 77.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84385172 - NM_139076 FAM175A 0 . . . 2.83 79.69 16 3.68 No 66 1.24 Yes 0 0 No -31 0.35 No 41 43.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68802573 + NM_133509 RAD51B 0 . . . 1.94 68.78 30 6.21 Yes 76 1.04 Yes 0 0 No -29 0.7 Yes 43 83.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47730715 + NM_000251 MSH2 0 . . . 1.05 70.32 21 3.79 No 67 -4.24 No 0 0 No -20 0.72 Yes 48 76.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37033702 + NM_000249 MLH1 0 . . . 2.69 76.6 33 6.24 Yes 60 2.14 Yes 0 0 No -30 0.4 No 43 88.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68812754 + NM_133509 RAD51B 0 . . . 1.69 66.1 16 5.81 Yes 60 -5.33 No 0 0 No -29 0.72 Yes 49 62.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59858423 - NM_032043 BRIP1 0 . . . 3.64 73.9 19 4.69 No 11 0.37 No 0 0 No -18 0.77 Yes 47 76.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68565896 + NM_133509 RAD51B 0 . . . 0.74 75.66 17 5.89 Yes 15 1.61 Yes 0 0 No -28 0.4 No 43 93.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68453543 + NM_133509 RAD51B 0 . . . 5.34 89.47 12 6.18 Yes 9 0.86 Yes 0 0 No -35 0.47 No 49 89.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75511377 - NM_001040108 MLH3 0 . . . 0.29 58.22 84 9.63 Yes 30 0.36 No 0 0 No -35 0.31 No 28 72.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68583113 + NM_133509 RAD51B 0 . . . 1.41 72.78 17 4.77 No -2 0.45 No 0 0 No -19 0.82 Yes 51 78.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89632215 + NM_000314 PTEN 0 . . . 8.49 92.41 34 6.38 Yes 47 1.24 Yes 0 0 No -22 0.39 No 43 70.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32968608 + NM_000059 BRCA2 0 . . . 3.23 69.09 21 5.35 No 62 -1.88 No 0 0 No -42 0.42 No 35 68.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59908189 - NM_032043 BRIP1 0 . . . 1.67 72.89 23 4.8 No 40 0.98 Yes 0 0 No -22 0.81 Yes 50 88.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47755112 + NM_000251 MSH2 0 . . . 3.01 68.13 26 5.65 Yes 2 1.33 Yes 0 0 No -25 0.84 Yes 47 63.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29111816 - NM_001005735 CHEK2 0 . . . 4.32 78.06 49 4.3 No 2 0.11 No 0 0 No -26 0.6 No 47 51.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41211263 - NM_007294 BRCA1 0 . . . 6.54 82.31 30 6.53 Yes 58 1.46 Yes 0 0 No -29 0.97 Yes 54 55.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47712781 + NM_000251 MSH2 0 . . . 4.4 73.37 13 4.36 No 48 -2.6 No 0 0 No -23 0.33 No 46 82.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47638498 + NM_000251 MSH2 0 . . . 1.14 80.37 41 6.94 Yes 13 1.5 Yes 0 0 No -40 0.82 Yes 45 72.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41255086 - NM_007294 BRCA1 0 . . . 3.06 68.11 19 4.13 No 18 1.35 Yes 0 0 No -18 0.63 No 40 53.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59937994 - NM_032043 BRIP1 0 . . . 4.77 79.65 20 3.36 No 2 1.5 Yes 0 0 No -19 0.85 Yes 18 61.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6031280 - NM_000535 PMS2 0 . . . 1.42 72.26 104 11.85 Yes 30 1.19 Yes 0 0 No -34 0.42 No 28 73.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68696635 + NM_133509 RAD51B 0 . . . 5.7 72.9 30 5.9 Yes 2 1.12 Yes 0 0 No -21 0.36 No 45 66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69086438 + NM_133509 RAD51B 0 . . . 3.98 81.95 20 4.45 No -3 0.29 No 0 0 No -33 0.58 No 49 75.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94214517 - NM_005591 MRE11 0 . . . 3.22 75.87 34 6.16 Yes 56 0.3 No 0 0 No -28 0.6 No 46 33.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69062033 + NM_133509 RAD51B 0 . . . 2.6 61.51 15 5.74 Yes 21 1.05 Yes 0 0 No -50 0.88 Yes 37 80.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68931686 + NM_133509 RAD51B 0 . . . 5.09 74.12 24 5.19 No 59 1.11 Yes 0 0 No -23 0.56 No 47 76.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94218017 - NM_005591 MRE11 0 . . . 1.3 0 28 5.58 Yes 8 0.62 No 0 0 No -27 0.78 Yes 35 50.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68668259 + NM_133509 RAD51B 0 . . . 6.65 73.37 23 4.55 No 68 -3.74 No 0 0 No -28 0.59 No 40 44.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68953018 + NM_133509 RAD51B 0 . . . 4.84 66.46 18 4.62 No 72 1.91 Yes 0 0 No -43 0.38 No 37 58.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32972133 + NM_000059 BRCA2 0 . . . 4.4 82.21 58 7.71 Yes 56 0.86 Yes 0 0 No -24 0.35 No 48 82.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68822848 + NM_133509 RAD51B 0 . . . 6.95 89.09 36 5.81 Yes 11 0.04 No 0 0 No -21 0.85 Yes 47 60.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41013794 + NM_001164269 RAD51 0 . . . 1.37 81.31 17 5.57 Yes 3 0.62 No 0 0 No -27 0.78 Yes 50 86.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68789701 + NM_133509 RAD51B 0 . . . 2.09 68.52 19 4.13 No -4 0.69 No 0 0 No -18 0.87 Yes 53 33.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69113228 + NM_133509 RAD51B 0 . . . 2.56 82.64 18 4.57 No 15 0.56 No 0 0 No -17 0.81 Yes 43 89.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152369322 - NM_005431 XRCC2 0 . . . 1.32 0 18 5.37 No 32 1.66 Yes 0 0 No -24 0.76 Yes 32 96.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131903013 + NM_005732 RAD50 0 . . . 1.73 72.8 22 5.74 Yes 66 0.17 No 0 0 No -21 0.87 Yes 35 45.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68570022 + NM_133509 RAD51B 0 . . . 3.03 75.28 20 5.1 No 19 0.19 No 0 0 No -19 0.89 Yes 27 45.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29126999 - NM_001005735 CHEK2 0 . . . 5.19 81.24 22 5.29 No 32 1.64 Yes 0 0 No -19 0.48 No 26 89.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23637414 - NM_024675 PALB2 0 . . . 0.55 68.88 14 5.38 No -1 -2.27 No 0 0 No -22 0.93 Yes 38 68.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56804016 + NM_058216 RAD51C 0 . . . 0.94 66.77 22 5.29 No NA NA NA 0 0 No -21 0.69 Yes 44 43.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89666823 + NM_000314 PTEN 0 . . . 1.83 84.08 11 4.12 No 64 -3.34 No 0 0 No -59 0.55 No 50 75.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68800840 + NM_004360 CDH1 0 . . . 0.08 64.87 10 4 No 32 1.16 Yes 0 0 No -26 0.34 No 15 65.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59872039 - NM_032043 BRIP1 0 . . . 8.08 80.1 72 6.35 Yes 37 1.15 Yes 0 0 No -22 0.73 Yes 42 36.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37054445 + NM_000249 MLH1 0 . . . 3.77 77.41 24 3.64 No 76 1.52 Yes 0 0 No -28 0.46 No 12 83.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131953710 + NM_005732 RAD50 0 . . . 9.34 95.17 20 5.57 Yes 3 1.02 Yes 0 0 No -28 0.53 No 43 56.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131904276 + NM_005732 RAD50 0 . . . 5.21 72.9 24 4.11 No 64 -5.17 No 0 0 No -23 0.76 Yes 49 48.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59811837 - NM_032043 BRIP1 0 . . . 1.14 78.49 28 4.49 No 3 0.73 No 0 0 No -27 0.72 Yes 48 57.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108212094 + NM_000051 ATM 0 . . . 5.08 75.79 12 4.69 No 17 1.17 Yes 0 0 No -39 0.54 No 38 73.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59876534 - NM_032043 BRIP1 0 . . . 0.65 54.51 26 5.39 No 75 -5.8 No 0 0 No -25 0.68 Yes 43 69.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68417360 + NM_133509 RAD51B 0 . . . 8.28 85.15 28 6.78 Yes 44 0.28 No 0 0 No -27 0.85 Yes 44 84.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68436315 + NM_133509 RAD51B 0 . . . 2.34 0 26 5.82 Yes 72 -6 No 0 0 No -30 0.59 No 50 89.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75511956 - NM_001040108 MLH3 0 . . . 6.34 86.2 22 5.92 Yes 3 1.42 Yes 0 0 No -28 0.43 No 49 91.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33424858 - NM_002878 RAD51D 0 . . . 7.42 89.37 36 5.51 No 9 2.05 Yes 0 0 No -33 0.57 No 49 89.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108223994 + NM_000051 ATM 0 . . . 2.47 85.37 21 4.53 No 3 0.71 No 0 0 No -21 0.76 Yes 50 75.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68834938 + NM_133509 RAD51B 0 . . . 7.15 88.4 32 4.3 No 41 0.44 No 0 0 No -31 0.61 No 40 88.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69031450 + NM_133509 RAD51B 0 . . . 3.86 76.37 21 5.48 No 74 0.86 Yes 0 0 No -24 0.69 Yes 44 73.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59777432 - NM_032043 BRIP1 0 . . . 3.26 65.69 48 7.61 Yes 50 -4.13 No 0 0 No -41 0.46 No 53 54.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68965571 + NM_133509 RAD51B 0 . . . 7.11 71.68 19 5.35 No 14 0.8 Yes 0 0 No -21 0.71 Yes 33 67.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89683712 + NM_000314 PTEN 0 . . . 2.19 64.47 19 4.11 No 28 0.35 No 0 0 No -24 0.85 Yes 42 64.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131962080 + NM_005732 RAD50 0 . . . 4.71 76.53 12 3.97 No 14 -2.15 No 0 0 No -26 0.41 No 47 56.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48019221 + NM_000179 MSH6 0 . . . 2.41 78.91 23 5.2 No -4 1.54 Yes 0 0 No -22 0.58 No 54 59.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68499027 + NM_133509 RAD51B 0 . . . 3.86 86.05 48 7.62 Yes 35 1.41 Yes 0 0 No -34 0.4 No 47 93.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37081957 + NM_000249 MLH1 0 . . . 5.98 81.18 12 4.8 No 74 -3.8 No 0 0 No -19 0.57 No 44 76.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59847108 - NM_032043 BRIP1 0 . . . 9.7 86.54 17 5.87 Yes 26 0.88 Yes 0 0 No -23 0.52 No 43 85.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68391545 + NM_133509 RAD51B 0 . . . 3.02 71.03 29 5.83 Yes 28 0.72 No 0 0 No -28 0.91 Yes 38 78.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59856072 - NM_032043 BRIP1 0 . . . 4.18 72.57 13 4.36 No 43 -1.65 No 0 0 No -49 0.32 No 52 58.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215655822 - NM_000465 BARD1 0 . . . 2.82 68.76 17 5.74 Yes 74 0.5 No 0 0 No -27 0.84 Yes 46 68.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68465915 + NM_133509 RAD51B 0 . . . 8.41 86.04 24 5.37 No 34 1.91 Yes 0 0 No -28 0.68 Yes 42 89.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48019985 + NM_000179 MSH6 0 . . . 4.85 78.35 28 5.18 No 0 1.09 Yes 0 0 No -20 0.69 Yes 49 50.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152343949 - NM_005431 XRCC2 0 . . . 7.37 85.69 18 4.2 No 74 0.06 No 0 0 No -21 0.91 Yes 39 43.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68682222 + NM_133509 RAD51B 0 . . . 3.73 67.01 16 3.88 No 54 0.51 No 0 0 No -20 0.87 Yes 44 64.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69100631 + NM_133509 RAD51B 0 . . . 0.91 63.81 15 5.09 No 1 0.13 No 0 0 No -20 0.46 No 51 68.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69089966 + NM_133509 RAD51B 0 . . . 1.85 79.28 48 7.1 Yes 41 1.87 Yes 0 0 No -32 0.5 No 48 84.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75487352 - NM_001040108 MLH3 0 . . . 2.47 58.22 25 5.39 No 9 1.17 Yes 0 0 No -22 0.71 Yes 49 53.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47795265 + NM_000251 MSH2 0 . . . 4.57 70.94 30 6.74 Yes 64 -2.85 No 0 0 No -26 0.53 No 51 65.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68633250 + NM_133509 RAD51B 0 . . . 4.91 72.55 12 3.99 No 53 0.69 No 0 0 No -46 0.73 Yes 43 43.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7572589 - NM_000546 TP53 0 . . . 4.08 73.71 34 6.32 Yes 48 -2.91 No 0 0 No -33 0.9 Yes 56 51.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68953110 + NM_133509 RAD51B 0 . . . 2.75 73.88 29 5.81 Yes 22 0.21 No 0 0 No -21 0.62 No 35 63.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68609052 + NM_133509 RAD51B 0 . . . 1.68 0 20 6.98 Yes 28 0.83 Yes 0 0 No -32 0.44 No 16 45.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41211644 - NM_007294 BRCA1 0 . . . 2.38 61.7 15 5.2 No 76 -5.95 No 0 0 No -14 0.43 No 43 84.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48006494 + NM_000179 MSH6 0 . . . 5.51 76 25 7.34 Yes 0 0.58 No 0 0 No -24 0.63 No 44 93.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29137543 - NM_001005735 CHEK2 0 . . . 0.74 76.57 21 4.8 No -3 0.26 No 0 0 No -20 0.88 Yes 26 33.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56771234 + NM_058216 RAD51C 0 . . . 0.87 0 30 6 Yes 74 -5.51 No 0 0 No -31 0.69 Yes 45 42.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56771955 + NM_058216 RAD51C 0 . . . 1.4 84.22 50 7.98 Yes 3 0.62 No 0 0 No -30 0.59 No 44 48.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29085034 - NM_001005735 CHEK2 0 . . . 1.03 75.85 28 5.79 Yes 56 -3.35 No 0 0 No -27 0.66 No 47 34.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56781993 + NM_058216 RAD51C 0 . . . 5.24 76.94 23 5.09 No 23 2.52 Yes 0 0 No -22 0.58 No 35 82.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131924102 + NM_005732 RAD50 0 . . . 0.84 68.93 33 6.24 Yes 66 -6.01 No 0 0 No -32 0.7 Yes 39 40.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69025249 + NM_133509 RAD51B 0 . . . 8.42 84.99 25 6.32 Yes 26 0.13 No 0 0 No -24 0.75 Yes 44 38.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75494110 - NM_001040108 MLH3 0 . . . 0.76 67.51 25 4.35 No 37 0.61 No 0 0 No -27 0.45 No 52 42.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32897176 + NM_000059 BRCA2 0 . . . 4.52 76.26 23 4.8 No 72 -1.7 No 0 0 No -22 0.74 Yes 40 74.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68884688 + NM_133509 RAD51B 0 . . . 4.1 70.26 12 4.24 No -2 0.39 No 0 0 No -30 0.68 Yes 36 52.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32970273 + NM_000059 BRCA2 0 . . . 0.87 68.06 13 4.36 No 52 0.53 No 0 0 No -32 0.5 No 48 80.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190720370 + NM_000534 PMS1 0 . . . 7.94 88.22 46 6.75 Yes 9 0.03 No 0 0 No -32 0.61 No 39 66.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104171015 - NM_001100119 XRCC3 0 . . . 1.13 74.68 22 5.1 No 20 0.67 No 0 0 No -21 0.52 No 54 57.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190714403 + NM_000534 PMS1 0 . . . 2.98 0 15 4.58 No 61 0.76 No 0 0 No -21 0.69 Yes 40 54.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94169858 - NM_005591 MRE11 0 . . . 4.28 77.08 17 7.35 Yes 75 -3.78 No 0 0 No -24 0.68 Yes 35 90.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47720553 + NM_000251 MSH2 0 . . . 7.21 75.38 35 5.69 Yes 51 1.23 Yes 0 0 No -19 0.42 No 39 84.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68748308 + NM_133509 RAD51B 0 . . . 3.22 0 22 3.99 No 40 1.32 Yes 0 0 No -47 0.37 No 39 37.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75489473 - NM_001040108 MLH3 0 . . . 5.13 81.08 53 7.63 Yes 9 0.44 No 0 0 No -24 0.46 No 49 80.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69034628 + NM_133509 RAD51B 0 . . . 0.59 0 14 6.93 Yes 49 -5.16 No 0 0 No -28 0.37 No 53 29.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89711316 + NM_000314 PTEN 0 . . . 0.11 75.7 37 8.4 Yes 61 1.26 Yes 0 0 No -20 0.56 No 47 73.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68389048 + NM_133509 RAD51B 0 . . . 5.54 83.4 41 6.66 Yes 38 0.68 No 0 0 No -24 0.55 No 39 78.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190688654 + NM_000534 PMS1 0 . . . 4.75 82.11 29 5.92 Yes 0 0.01 No 0 0 No -28 0.91 Yes 47 52.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68870840 + NM_004360 CDH1 0 . . . 0.87 72.77 15 4 No -4 0.4 No 0 0 No -28 0.27 No 40 55.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68486681 + NM_133509 RAD51B 0 . . . 3.2 81.3 18 4.09 No 4 -2.17 No 0 0 No -17 0.81 Yes 48 65.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68447048 + NM_133509 RAD51B 0 . . . 0.45 74.09 16 5.83 Yes 65 0.42 No 0 0 No -28 0.65 No 36 30.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7590140 - NM_000546 TP53 0 . . . 3.14 67.93 37 7.19 Yes 57 -0.13 No 0 0 No -37 0.75 Yes 48 30.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23649123 - NM_024675 PALB2 0 . . . 8.65 93.58 17 4.03 No 19 1.23 Yes 0 0 No -54 0.54 No 43 94.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89695971 + NM_000314 PTEN 0 . . . 1.02 67.99 46 5.34 No 39 0.6 No 0 0 No -32 0.59 No 46 59.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41251106 - NM_007294 BRCA1 0 . . . 0.09 74.68 13 4.36 No 4 0.41 No 0 0 No -34 0.57 No 54 84.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68429728 + NM_133509 RAD51B 0 . . . 5.27 80.68 19 5.48 No 24 1.07 Yes 0 0 No -18 0.86 Yes 34 83.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68626630 + NM_133509 RAD51B 0 . . . 1.6 70.07 19 5.32 No 29 1.35 Yes 0 0 No -18 0.65 No 29 76.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104173593 - NM_001100119 XRCC3 0 . . . 6.56 0 22 4.69 No 23 1.74 Yes 20 0.91 Yes -40 0.8 Yes 35 52.53 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68839636 + NM_133509 RAD51B 0 . . . 3.41 73.06 57 7.68 Yes 30 1.24 Yes 0 0 No -24 0.49 No 28 85.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23628874 - NM_024675 PALB2 0 . . . 9.32 87.82 22 4.7 No 32 0.45 No 0 0 No -21 0.61 No 26 54.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68706258 + NM_133509 RAD51B 0 . . . 3.53 65.94 19 6.55 Yes 59 1.08 Yes 0 0 No -29 0.43 No 31 90.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47736387 + NM_000251 MSH2 0 . . . 2.17 71.93 16 4.17 No 62 -5.36 No 0 0 No -18 0.46 No 38 48.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68297143 + NM_133509 RAD51B 0 . . . 2.11 0 23 5.39 No 11 0.41 No 0 0 No -22 0.91 Yes 37 91.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68776643 + NM_004360 CDH1 0 . . . 8.77 81.4 45 6.76 Yes 69 0.82 Yes 0 0 No -35 0.8 Yes 33 74.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108138921 + NM_000051 ATM 0 . . . 2.5 76.61 66 8.11 Yes 2 0.78 Yes 0 0 No -24 0.62 No 44 46.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190731326 + NM_000534 PMS1 0 . . . 0.74 62.49 53 7.53 Yes 28 1.59 Yes 0 0 No -24 0.64 No 30 62.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59891650 - NM_032043 BRIP1 0 . . . 11.28 86.3 13 4.87 No 70 1.48 Yes 0 0 No -23 0.94 Yes 45 93.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68564692 + NM_133509 RAD51B 0 . . . 10.02 90.76 19 5.83 Yes 51 1.71 Yes 0 0 No -27 0.82 Yes 40 76.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68343465 + NM_133509 RAD51B 0 . . . 1.07 0 17 4.53 No 53 0.73 No 0 0 No -17 0.35 No 26 66.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41203287 - NM_007294 BRCA1 0 . . . 0.07 69.01 33 5.65 Yes 64 -3.6 No 0 0 No -30 0.46 No 44 83.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68402630 + NM_133509 RAD51B 0 . . . 0.77 85.25 12 3.87 No 73 -4.86 No 0 0 No -27 0.65 No 47 68.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59900546 - NM_032043 BRIP1 0 . . . 3.15 70.12 26 6.37 Yes 36 0.16 No 0 0 No -25 0.81 Yes 45 79.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89684264 + NM_000314 PTEN 0 . . . 8.81 89.39 33 6.07 Yes 2 0.33 No 0 0 No -32 0.82 Yes 50 78.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108091660 + NM_000051 ATM 0 . . . 0.84 63.77 44 7.7 Yes 76 -5.73 No 0 0 No -35 0.56 No 40 65.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68969645 + NM_133509 RAD51B 0 . . . 0.05 0 24 5.75 Yes 57 -4.93 No 0 0 No -23 0.83 Yes 41 34.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68315154 + NM_133509 RAD51B 0 . . . 7.22 74.93 16 4.69 No 18 1.47 Yes 0 0 No -36 0.67 Yes 40 86.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68460719 + NM_133509 RAD51B 0 . . . 3.32 72.52 23 4.77 No 45 -4.83 No 0 0 No -22 0.8 Yes 48 67.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68800559 + NM_133509 RAD51B 0 . . . 6.19 78.86 24 4.9 No 37 0.78 Yes 0 0 No -23 0.83 Yes 43 68.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68711868 + NM_133509 RAD51B 0 . . . 4.31 70.32 13 4.36 No 65 1.21 Yes 0 0 No -35 0.66 Yes 48 62.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68850051 + NM_004360 CDH1 0 . . . 2.57 0 47 7.03 Yes 55 0.86 Yes 0 0 No -15 0.24 No 49 62.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68823714 + NM_004360 CDH1 0 . . . 0.32 74.68 13 6.08 Yes 47 0.63 No 0 0 No -30 0.5 No 54 89.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90968030 - NM_002485 NBN 0 . . . 6.37 79.65 26 6.17 Yes 15 0.78 Yes 0 0 No -25 0.65 No 43 89.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41209291 - NM_007294 BRCA1 0 . . . 1.79 80.85 34 5.74 Yes 13 1.51 Yes 0 0 No -33 0.96 Yes 45 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68638035 + NM_133509 RAD51B 0 . . . 3.58 83.95 22 4.9 No 54 -1.39 No 0 0 No -21 0.93 Yes 30 87.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69059703 + NM_133509 RAD51B 0 . . . 4.35 77.4 19 6.01 Yes 68 -5.27 No 0 0 No -24 0.52 No 52 50.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190669409 + NM_000534 PMS1 0 . . . 1.52 69.42 21 5.2 No 18 -2.84 No 0 0 No -21 0.69 Yes 51 62.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68501301 + NM_133509 RAD51B 0 . . . 4.24 80.03 26 6.5 Yes 59 1.37 Yes 0 0 No -30 0.66 No 50 82.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190711166 + NM_000534 PMS1 0 . . . 2.59 84.35 24 5.29 No 15 0.13 No 0 0 No -23 0.95 Yes 43 60.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94156306 - NM_005591 MRE11 0 . . . 8.3 81.03 26 6.79 Yes 60 0.56 No 0 0 No -26 0.62 No 45 81.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41020004 + NM_001164269 RAD51 0 . . . 7.19 81.34 26 5.06 No 14 1.72 Yes 0 0 No -21 0.37 No 44 87.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47747952 + NM_000251 MSH2 0 . . . 1.2 73.08 18 4.9 No -1 -1.97 No 0 0 No -23 0.6 No 34 80.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190648253 + NM_000534 PMS1 0 . . . 6.06 79.19 23 5.29 No -1 0.44 No 0 0 No -27 0.55 No 41 62.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29135650 - NM_001005735 CHEK2 0 . . . 3.06 84 23 5.39 No 2 0.98 Yes 0 0 No -59 0.49 No 12 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68775891 + NM_133509 RAD51B 0 . . . 0.37 0 28 6.78 Yes 30 0.34 No 0 0 No -27 0.51 No 44 65.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68892177 + NM_133509 RAD51B 0 . . . 4.11 93.93 23 7.34 Yes 25 -1.78 No 0 0 No -22 0.95 Yes 45 63.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108190999 + NM_000051 ATM 0 . . . 3.15 74.04 49 7.91 Yes -2 1.46 Yes 0 0 No -21 0.59 No 47 91.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29135365 - NM_001005735 CHEK2 0 . . . 6.23 90.05 20 5.65 Yes 16 0.8 Yes 0 0 No -19 0.75 Yes 42 94.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56796762 + NM_058216 RAD51C 0 . . . 2.5 0 18 6.67 Yes 11 0.93 Yes 0 0 No -26 0.65 No 47 96.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68567883 + NM_133509 RAD51B 0 . . . 7.42 88.45 22 5.1 No 0 1 Yes 0 0 No -21 0.57 No 47 63.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108116576 + NM_000051 ATM 0 . . . 3.01 0 20 4.93 No 40 0.19 No 0 0 No -22 0.86 Yes 36 88.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29116542 - NM_001005735 CHEK2 0 . . . 5.53 79.58 30 4.86 No 7 0.5 No 0 0 No -26 0.75 Yes 41 82.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68600151 + NM_133509 RAD51B 0 . . . 3.47 71.85 16 5.1 No 14 -3.16 No 0 0 No -19 0.38 No 31 71.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94153597 - NM_005591 MRE11 0 . . . 7.13 85.23 22 4.24 No 15 1.34 Yes 0 0 No -21 0.35 No 43 84.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68700567 + NM_133509 RAD51B 0 . . . 1.43 62.24 15 4.96 No 2 -1.92 No 0 0 No -26 0.54 No 34 33.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108128529 + NM_000051 ATM 0 . . . 4.95 79.66 17 4.8 No 10 0.78 Yes 0 0 No -16 0.59 No 48 68.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1223941 + NM_000455 STK11 0 . . . 9.88 88.56 25 5.07 No 15 0.56 No 0 0 No -24 0.82 Yes 43 91.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32937506 + NM_000059 BRCA2 0 . . . 5.61 82.77 31 5.83 Yes 71 -5.53 No 0 0 No -30 0.91 Yes 43 78.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69122777 + NM_133509 RAD51B 0 . . . 2.01 70.4 25 6.04 Yes 55 0.73 No 0 0 No -24 0.83 Yes 47 26.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6039426 - NM_000535 PMS2 0 . . . 10.87 85.73 20 5.1 No 2 0.4 No 0 0 No -19 0.77 Yes 47 75.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68786901 + NM_133509 RAD51B 0 . . . 1.21 61.52 53 8.4 Yes 29 0.58 No 0 0 No -52 0.47 No 29 87.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68943588 + NM_133509 RAD51B 0 . . . 4.26 80.37 18 5.48 No 4 -0.76 No 0 0 No -17 0.71 Yes 54 63.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68348705 + NM_133509 RAD51B 0 . . . 8.44 87.44 15 5.1 No 34 1.53 Yes 0 0 No -19 0.37 No 53 40.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90961184 - NM_002485 NBN 0 . . . 1.26 0 24 7.38 Yes 58 -3.26 No 0 0 No -23 0.4 No 53 45.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52444863 - NM_004656 BAP1 0 . . . 1.79 62.64 23 4.87 No 64 -5.68 No 0 0 No -25 0.46 No 46 70.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94178079 - NM_005591 MRE11 0 . . . 0.64 0 29 6.32 Yes 13 1.19 Yes 0 0 No -28 0.88 Yes 45 76.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41009287 + NM_001164269 RAD51 0 . . . 1.86 79.49 47 7.71 Yes -1 0.76 No 0 0 No -33 0.87 Yes 51 68.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68611902 + NM_133509 RAD51B 0 . . . 0.85 69.12 11 4.9 No 76 0.5 No 0 0 No -17 0.43 No 46 68.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59847862 - NM_032043 BRIP1 0 . . . 0.55 58.79 21 7.12 Yes 55 0.02 No 0 0 No -20 0.63 No 14 70.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105201726 + NM_021930 RINT1 0 . . . 0.13 74.23 18 4.88 No 38 0.3 No 0 0 No -17 0.54 No 54 83.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56776889 + NM_058216 RAD51C 0 . . . 2.14 77.02 26 5.47 No 46 1.06 Yes 0 0 No -28 0.6 No 44 46.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68890728 + NM_133509 RAD51B 0 . . . 6.09 75.58 21 5.17 No 76 0.11 No 0 0 No -23 0.74 Yes 38 64.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69147320 + NM_133509 RAD51B 0 . . . 7.05 75.93 35 6.24 Yes 21 0.14 No 0 0 No -32 0.64 No 45 61.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68927040 + NM_133509 RAD51B 0 . . . 3.17 71.42 20 5.1 No 38 0.37 No 0 0 No -19 0.58 No 52 45.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32921070 + NM_000059 BRCA2 0 . . . 4.36 72.86 13 4.8 No 42 0.97 Yes 0 0 No -20 0.44 No 40 53.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68442638 + NM_133509 RAD51B 0 . . . 4.39 72.69 16 4.69 No 1 0.41 No 0 0 No -42 0.6 No 44 84.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68797693 + NM_133509 RAD51B 0 . . . 2.98 78.91 31 5.83 Yes 66 -2.85 No 0 0 No -30 0.93 Yes 48 53.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32892067 + NM_000059 BRCA2 0 . . . 1.77 0 23 6.63 Yes 46 0.92 Yes 0 0 No -25 0.67 Yes 51 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37053734 + NM_000249 MLH1 0 . . . 6.64 88.72 32 6.72 Yes 70 0.15 No 0 0 No -32 0.5 No 48 64.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105182406 + NM_021930 RINT1 0 . . . 3.49 77.28 26 5.63 Yes 10 0.55 No 0 0 No -30 0.44 No 24 50.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59786884 - NM_032043 BRIP1 0 . . . 5.58 77.37 23 4.28 No 20 1.92 Yes 0 0 No -22 0.74 Yes 38 51.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90983695 - NM_002485 NBN 0 . . . 5.69 72.78 19 5.37 No 8 0.77 Yes 0 0 No -18 0.37 No 34 65.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32946339 + NM_000059 BRCA2 0 . . . 4.88 86.08 19 7.82 Yes 57 0.27 No 0 0 No -37 0.73 Yes 50 52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68990939 + NM_133509 RAD51B 0 . . . 3.37 69.28 16 5.2 No 0 1.16 Yes 0 0 No -28 0.46 No 42 43.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68349877 + NM_133509 RAD51B 0 . . . 3.49 74.91 50 7.21 Yes 42 1.2 Yes 0 0 No -49 0.87 Yes 47 51.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84401111 - NM_139076 FAM175A 0 . . . 4.21 84.41 15 4.58 No 20 0.95 Yes 0 0 No -38 0.34 No 42 82.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68395595 + NM_133509 RAD51B 0 . . . 9.67 86.37 17 4.8 No 21 1.09 Yes 0 0 No -22 0.53 No 47 43.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37040836 + NM_000249 MLH1 0 . . . 4.05 83.46 37 6.4 Yes 75 -1.86 No 0 0 No -36 0.89 Yes 43 66.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47762653 + NM_000251 MSH2 0 . . . 5.06 82.9 25 5.2 No 51 1.18 Yes 0 0 No -24 0.94 Yes 50 90.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40991810 + NM_001164269 RAD51 0 . . . 2.7 70.48 24 4.74 No 41 -3.52 No 0 0 No -50 0.78 Yes 48 49.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68382577 + NM_133509 RAD51B 0 . . . 7.15 82.33 13 5.29 No 7 1.23 Yes 0 0 No -22 0.62 No 51 61.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33444269 - NM_002878 RAD51D 0 . . . 1.27 68.22 34 7.34 Yes 66 1.2 Yes 0 0 No -33 0.85 Yes 14 62.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108165876 + NM_000051 ATM 0 . . . 7.15 88.46 21 5.44 No 62 0.76 No 0 0 No -20 0.38 No 40 86.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68347738 + NM_133509 RAD51B 0 . . . 2.41 67.98 22 7.21 Yes 55 -4.48 No 0 0 No -21 0.97 Yes 33 22.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21966002 - NM_000077 CDKN2A 0 . . . 4.94 72.67 17 3.69 No 35 0.56 No 0 0 No -24 0.75 Yes 20 41.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90973998 - NM_002485 NBN 0 . . . 2.93 59.82 27 5.1 No 18 1.2 Yes 0 0 No -33 0.77 Yes 40 51.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68636690 + NM_133509 RAD51B 0 . . . 4.88 68.41 14 5.1 No 67 0.26 No 0 0 No -19 0.55 No 43 63.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105199152 + NM_021930 RINT1 0 . . . 2.9 71.08 25 5.89 Yes 48 0.43 No 0 0 No -24 0.58 No 47 58.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68858390 + NM_133509 RAD51B 0 . . . 5.52 93.9 35 6.87 Yes 33 0.96 Yes 0 0 No -22 0.58 No 25 66.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89666559 + NM_000314 PTEN 0 . . . 0.59 0 37 6 Yes 4 0.24 No 0 0 No -22 0.5 No 48 69.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68867884 + NM_004360 CDH1 0 . . . 3.12 0 27 5.1 No 36 0.43 No 0 0 No -26 0.7 Yes 30 86.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131908170 + NM_005732 RAD50 0 . . . 1 0 15 4.47 No 15 0.88 Yes 0 0 No -44 0.38 No 43 79.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59810950 - NM_032043 BRIP1 0 . . . 0.98 66.16 19 5.83 Yes 28 0.47 No 0 0 No -18 0.78 Yes 30 68.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29095826 - NM_001005735 CHEK2 0 . . . 6.39 89.61 20 5.04 No 65 -2.01 No 0 0 No -49 0.47 No 47 86.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47784624 + NM_000251 MSH2 0 . . . 2.36 72.14 19 3.6 No 62 0.71 No 0 0 No -33 0.89 Yes 38 36.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90989200 - NM_002485 NBN 0 . . . 1.92 64.29 29 5.4 No 35 0.84 Yes 0 0 No -29 0.62 No 48 73.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68986352 + NM_133509 RAD51B 0 . . . 0.82 78.69 23 3.9 No 43 0.87 Yes 0 0 No -20 0.53 No 44 86.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68792530 + NM_004360 CDH1 0 . . . 4.72 84.26 23 6.34 Yes 76 0.47 No 0 0 No -22 0.69 Yes 43 31.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68528730 + NM_133509 RAD51B 0 . . . 5.74 84.11 18 7 Yes 5 0.6 No 0 0 No -17 0.57 No 38 56.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68923724 + NM_133509 RAD51B 0 . . . 6.14 88.68 27 5.21 No 52 1.47 Yes 0 0 No -21 0.53 No 49 94.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68420994 + NM_133509 RAD51B 0 . . . 7.34 83.55 41 5.87 Yes -2 1.23 Yes 0 0 No -38 0.59 No 46 67.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37046053 + NM_000249 MLH1 0 . . . 4.01 74.59 14 4.47 No 65 1.97 Yes 0 0 No -35 0.49 No 46 83.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90978781 - NM_002485 NBN 0 . . . 7.57 79.84 27 5.54 No 28 0.66 No 0 0 No -27 0.5 No 30 73.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68742946 + NM_133509 RAD51B 0 . . . 6.06 79.46 35 6.16 Yes 71 0.07 No 0 0 No -34 0.77 Yes 44 39.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190660087 + NM_000534 PMS1 0 . . . 1.78 74.48 42 6.47 Yes 61 -5.14 No 0 0 No -41 0.51 No 50 40.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68330676 + NM_133509 RAD51B 0 . . . 3.8 85.78 20 6.48 Yes 55 -3.12 No 0 0 No -23 0.49 No 49 42.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68743002 + NM_133509 RAD51B 0 . . . 0.02 0 20 4.89 No 22 0.07 No 0 0 No -19 0.64 No 36 50.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59797079 - NM_032043 BRIP1 0 . . . 3.53 0 21 4.74 No 13 1.89 Yes 0 0 No -20 0.49 No 45 88.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89665166 + NM_000314 PTEN 0 . . . 4.31 72.6 51 4.99 No 6 0.63 No 0 0 No -31 0.84 Yes 44 93.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68861495 + NM_133509 RAD51B 0 . . . 6.03 88.85 25 5.11 No 32 0.36 No 0 0 No -28 0.53 No 26 52.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41024671 + NM_001164269 RAD51 0 . . . 1.3 68.95 32 5.27 No 16 1.16 Yes 0 0 No -31 0.69 Yes 42 93.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108175041 + NM_000051 ATM 0 . . . 7.69 84.19 14 5.29 No 17 0.96 Yes 0 0 No -29 0.61 No 32 52.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108229493 + NM_000051 ATM 0 . . . 4.78 88.36 21 5.16 No 8 0.68 No 0 0 No -24 0.61 No 50 89.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68366306 + NM_133509 RAD51B 0 . . . 2.61 0 22 3.16 No 47 0.86 Yes 0 0 No -21 0.32 No 35 42.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68794915 + NM_004360 CDH1 0 . . . 2.13 64.29 28 5.48 No 17 -1.5 No 0 0 No -27 0.93 Yes 41 85.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69100792 + NM_133509 RAD51B 0 . . . 0.25 71.38 21 4.57 No 33 0.2 No 0 0 No -25 0.81 Yes 28 60.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68887111 + NM_133509 RAD51B 0 . . . 1.83 78.19 23 5.36 No 27 -2.94 No 0 0 No -25 0.51 No 55 26.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41012354 + NM_001164269 RAD51 0 . . . 5.22 84.95 22 5 No 8 0.88 Yes 0 0 No -21 0.86 Yes 50 60.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108205321 + NM_000051 ATM 0 . . . 3.76 64.43 11 4.9 No 36 -3.3 No 0 0 No -59 0.45 No 48 54.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7565528 - NM_000546 TP53 0 . . . 0.03 64.84 26 6.3 Yes 69 1.59 Yes 0 0 No -26 0.62 No 52 33.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68337459 + NM_133509 RAD51B 0 . . . 5.76 75.42 22 5.24 No 4 0.37 No 0 0 No -21 0.39 No 53 59.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89728755 + NM_000314 PTEN 0 . . . 2.97 79.8 30 5.58 Yes 42 0.34 No 0 0 No -18 0.56 No 45 83.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59875225 - NM_032043 BRIP1 0 . . . 2.42 68.2 29 6.4 Yes 72 1.3 Yes 0 0 No -28 0.84 Yes 49 38.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29113783 - NM_001005735 CHEK2 0 . . . 2.63 68.36 14 7.12 Yes 21 0.35 No 0 0 No -29 0.61 No 42 66.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190695689 + NM_000534 PMS1 0 . . . 1.74 72.03 15 5.57 Yes 74 0.63 No 0 0 No -22 0.74 Yes 52 29.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59828631 - NM_032043 BRIP1 0 . . . 8.92 89.05 25 5.25 No 31 2.12 Yes 0 0 No -24 0.44 No 52 61.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68820391 + NM_004360 CDH1 0 . . . 0.75 67.98 28 5.56 Yes 76 0.58 No 0 0 No -27 0.54 No 48 80.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59890461 - NM_032043 BRIP1 0 . . . 5.42 83.8 19 5.83 Yes -4 0.32 No 0 0 No -25 0.94 Yes 49 64.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68761740 + NM_133509 RAD51B 0 . . . 5.83 76.14 19 4.9 No 61 -3.33 No 0 0 No -22 0.87 Yes 48 71.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90996711 - NM_002485 NBN 0 . . . 4.92 81.47 32 4.32 No 27 -1.33 No 0 0 No -26 0.81 Yes 44 49.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69138470 + NM_133509 RAD51B 0 . . . 4.36 78.01 17 4.8 No 20 2.32 Yes 0 0 No -45 0.61 No 48 82.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68690081 + NM_133509 RAD51B 0 . . . 2.34 0 81 8.57 Yes 16 0.75 No 0 0 No -31 0.74 Yes 42 93.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68374608 + NM_133509 RAD51B 0 . . . 0.82 0 14 4.47 No -3 1.12 Yes 0 0 No -29 0.92 Yes 57 25.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56793528 + NM_058216 RAD51C 0 . . . 4.16 77.21 17 7.81 Yes -4 0.41 No 0 0 No -29 0.62 No 51 63.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59759487 - NM_032043 BRIP1 0 . . . 6.95 81.38 30 5.45 No 4 0.49 No 0 0 No -21 0.81 Yes 49 75.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94159965 - NM_005591 MRE11 0 . . . 8.2 81.23 26 3.64 No 51 0.64 No 0 0 No -20 0.74 Yes 45 71.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37037136 + NM_000249 MLH1 0 . . . 1.93 83.52 49 7.71 Yes 37 1.56 Yes 0 0 No -48 0.59 No 44 62.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68821830 + NM_004360 CDH1 0 . . . 2.81 68.95 17 5.9 Yes 16 1.42 Yes 0 0 No -34 0.74 Yes 42 94.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68373803 + NM_133509 RAD51B 0 . . . 0.7 85.89 18 4.86 No 27 0.79 Yes 0 0 No -20 0.78 Yes 31 70.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68816346 + NM_133509 RAD51B 0 . . . 2.41 68.34 53 8.12 Yes 13 0.83 Yes 0 0 No -18 0.54 No 45 74.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68854274 + NM_004360 CDH1 0 . . . 1.52 84.41 18 4.58 No 27 1.53 Yes 0 0 No -17 0.76 Yes 49 39.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108198827 + NM_000051 ATM 0 . . . 2.34 77.13 14 5 No 61 1.37 Yes 0 0 No -18 0.57 No 51 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32951044 + NM_000059 BRCA2 0 . . . 5.43 77.05 21 8.94 Yes 27 -2.43 No 0 0 No -23 0.66 No 49 52.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59815415 - NM_032043 BRIP1 0 . . . 5.45 75.11 37 6.56 Yes 53 1.32 Yes 0 0 No -36 0.91 Yes 29 69.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69138807 + NM_133509 RAD51B 0 . . . 2.15 69.92 18 4.8 No 35 0.66 No 0 0 No -22 0.88 Yes 51 52.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89643516 + NM_000314 PTEN 0 . . . 5.34 81.2 36 6.13 Yes 10 0.29 No 0 0 No -35 0.77 Yes 39 77.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68415028 + NM_133509 RAD51B 0 . . . 6.81 82.76 27 6.91 Yes 5 0.44 No 0 0 No -26 0.81 Yes 47 77.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37073988 + NM_000249 MLH1 0 . . . 8.94 78.86 32 5.74 Yes 56 0.31 No 0 0 No -28 0.45 No 42 76.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69148294 + NM_133509 RAD51B 0 . . . 0.85 62.67 35 5.12 No 68 -3.4 No 0 0 No -34 0.54 No 39 47.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68719367 + NM_133509 RAD51B 0 . . . 9.88 91.34 19 5 No 61 0.12 No 0 0 No -21 0.74 Yes 48 65.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68861416 + NM_133509 RAD51B 0 . . . 2.31 0 14 4.33 No 49 0.58 No 0 0 No -28 0.47 No 45 48.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33443560 - NM_002878 RAD51D 0 . . . 0.09 76.63 19 4.9 No 58 -3.89 No 0 0 No -48 0.48 No 43 55.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47799740 + NM_000251 MSH2 0 . . . 0.12 57.85 42 6.7 Yes 26 -3.21 No 0 0 No -39 0.7 Yes 12 37.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131957318 + NM_005732 RAD50 0 . . . 6.62 73.01 25 8.98 Yes 50 -2.21 No 0 0 No -24 0.61 No 44 73.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41194467 - NM_007294 BRCA1 0 . . . 0.36 81.08 39 5.78 Yes 47 -4.75 No 0 0 No -38 0.82 Yes 53 21.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68843291 + NM_004360 CDH1 0 . . . 2 81.44 24 4.55 No 10 1.1 Yes 0 0 No -26 0.68 Yes 48 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90998487 - NM_002485 NBN 0 . . . 5.74 76.73 10 4.58 No 40 0.64 No 0 0 No -21 0.51 No 49 45.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32941459 + NM_000059 BRCA2 0 . . . 0.6 77.18 22 7.21 Yes 54 0.67 No 0 0 No -21 0.95 Yes 36 40.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68577738 + NM_133509 RAD51B 0 . . . 1.62 66.34 20 5.1 No 67 1.37 Yes 0 0 No -19 0.6 No 46 66.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108167847 + NM_000051 ATM 0 . . . 2.28 80.18 36 5.52 No 75 1.26 Yes 0 0 No -25 0.54 No 40 51.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56793392 + NM_058216 RAD51C 0 . . . 2.07 85.91 15 4.58 No 62 -5.55 No 0 0 No -37 0.42 No 45 72.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69044612 + NM_133509 RAD51B 0 . . . 0.78 0 12 4.93 No 40 0.23 No 0 0 No -20 0.73 Yes 48 29.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68783534 + NM_004360 CDH1 0 . . . 6.01 75.62 31 6 Yes 8 0.86 Yes 0 0 No -30 0.69 Yes 50 92.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69030824 + NM_133509 RAD51B 0 . . . 7.05 76 24 5.19 No 20 0.54 No 0 0 No -24 0.65 No 38 82.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68534348 + NM_133509 RAD51B 0 . . . 2.26 81.67 35 6.45 Yes 18 0.69 No 0 0 No -43 0.52 No 52 81.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108142048 + NM_000051 ATM 0 . . . 4.61 77.8 41 6.91 Yes 33 0.89 Yes 0 0 No -24 0.85 Yes 45 49.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152372086 - NM_005431 XRCC2 0 . . . 3.06 68.72 15 5.28 No 63 -2.89 No 0 0 No -21 0.72 Yes 47 53.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84404408 - NM_139076 FAM175A 0 . . . 1.48 77.11 29 5.51 No 49 0.28 No 0 0 No -25 0.81 Yes 52 31.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6019643 - NM_000535 PMS2 0 . . . 4.98 87.84 40 5.97 Yes 35 1.5 Yes 0 0 No -29 0.24 No 48 70.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108147156 + NM_000051 ATM 0 . . . 5.6 82.9 11 5 No 41 0.81 Yes 0 0 No -24 0.62 No 46 46.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69110684 + NM_133509 RAD51B 0 . . . 4.5 82.23 13 5.2 No 32 0.7 No 0 0 No -21 0.64 No 40 92.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108237176 + NM_000051 ATM 0 . . . 3.76 76.45 25 4.96 No 15 1.12 Yes 0 0 No -24 0.78 Yes 43 84.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59802464 - NM_032043 BRIP1 0 . . . 0.85 74.12 42 4.9 No 64 1.89 Yes 0 0 No -26 0.39 No 44 45.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23637400 - NM_024675 PALB2 0 . . . 0.32 78.91 22 4.8 No 13 -3.18 No 0 0 No -21 0.96 Yes 48 58.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45799725 - NM_001048171 MUTYH 0 . . . 2.97 73.89 30 5.83 Yes 58 -4.15 No 0 0 No -29 0.57 No 47 55.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84381821 - NM_139076 FAM175A 0 . . . 1.14 80.37 28 5.36 No 21 1.2 Yes 0 0 No -27 0.83 Yes 50 86.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68728814 + NM_133509 RAD51B 0 . . . 7.37 92.15 18 3.8 No -3 0.33 No 0 0 No -25 0.37 No 52 53.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215588760 - NM_000465 BARD1 0 . . . 3.83 69.24 45 7.87 Yes 73 0.83 Yes 0 0 No -27 0.81 Yes 44 66.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7581817 - NM_000546 TP53 0 . . . 1.82 69.25 27 4.39 No 67 -4.96 No 0 0 No -26 0.72 Yes 53 54.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59755877 - NM_032043 BRIP1 0 . . . 4.88 82.63 26 6.73 Yes 38 0.5 No 0 0 No -29 0.84 Yes 50 57.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68729916 + NM_133509 RAD51B 0 . . . 6.43 74.21 13 4.03 No 71 -4.33 No 0 0 No -24 0.56 No 45 70.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94164424 - NM_005591 MRE11 0 . . . 1.12 0 34 5.43 No 22 1.65 Yes 0 0 No -33 0.57 No 36 47.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68799738 + NM_004360 CDH1 0 . . . 6.32 73.28 28 5.18 No 51 0.87 Yes 0 0 No -23 0.37 No 37 71.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37036816 + NM_000249 MLH1 0 . . . 3.12 80.4 19 4.58 No 5 0.11 No 0 0 No -18 0.83 Yes 53 70.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94202277 - NM_005591 MRE11 0 . . . 4.47 81.11 16 3.44 No 22 0.42 No 0 0 No -42 0.38 No 46 88.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47710389 + NM_000251 MSH2 0 . . . 2.63 0 14 4.47 No 48 0.94 Yes 0 0 No -31 0.86 Yes 53 85.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89664421 + NM_000314 PTEN 0 . . . 1.28 74.1 25 5.09 No -4 0.42 No 0 0 No -22 0.86 Yes 48 43.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68900380 + NM_133509 RAD51B 0 . . . 7.35 84.64 77 7.66 Yes 1 1.53 Yes 0 0 No -31 0.61 No 48 53.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59879488 - NM_032043 BRIP1 0 . . . 1.91 64.02 54 7.29 Yes 71 1.53 Yes 0 0 No -36 0.64 No 42 69.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68520614 + NM_133509 RAD51B 0 . . . 0.26 0 15 4.58 No 6 1.09 Yes 0 0 No -33 0.51 No 40 28.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41240611 - NM_007294 BRCA1 0 . . . 2.11 73.25 30 4.97 No 2 1.19 Yes 0 0 No -44 0.62 No 45 45.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23614980 - NM_024675 PALB2 0 . . . 0.22 0 11 5.1 No 68 1.8 Yes 0 0 No -40 0.63 No 27 61.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41277317 - NM_007294 BRCA1 0 . . . 4.25 79.28 17 4.8 No 7 0.51 No 0 0 No -16 0.35 No 51 60.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68760145 + NM_133509 RAD51B 0 . . . 7.37 75.86 17 7.68 Yes 30 0.57 No 0 0 No -16 0.58 No 34 63.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68417165 + NM_133509 RAD51B 0 . . . 3.39 0 35 7.65 Yes -1 0.18 No 0 0 No -34 0.92 Yes 39 70.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69053960 + NM_133509 RAD51B 0 . . . 9.22 78.68 21 5.04 No 34 -1.5 No 0 0 No -20 0.67 Yes 34 83.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69130147 + NM_133509 RAD51B 0 . . . 4.93 74.7 17 4.36 No 34 0.96 Yes 0 0 No -16 0.84 Yes 23 66.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89730631 + NM_000314 PTEN 0 . . . 0.63 61.63 13 4.12 No 62 0.49 No 0 0 No -32 0.7 Yes 48 29.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89650648 + NM_000314 PTEN 0 . . . 8.31 86.16 15 5.08 No 60 0.27 No 0 0 No -19 0.55 No 45 83.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41012428 + NM_001164269 RAD51 0 . . . 1.98 81.96 31 5.84 Yes 3 1.3 Yes 0 0 No -30 0.65 No 50 50.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59910675 - NM_032043 BRIP1 0 . . . 2.57 71.15 22 4.74 No 57 0.26 No 0 0 No -21 0.9 Yes 31 55.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68843445 + NM_133509 RAD51B 0 . . . 3.77 0 29 5.15 No 71 -1.85 No 0 0 No -28 0.74 Yes 52 42.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68644633 + NM_133509 RAD51B 0 . . . 3.96 77.99 34 5.5 No 20 0.59 No 0 0 No -18 0.38 No 51 78.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52434896 - NM_004656 BAP1 0 . . . 1.74 77.67 58 8.6 Yes 70 -4.85 No 0 0 No -58 0.55 No 47 82.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90983040 - NM_002485 NBN 0 . . . 0.18 0 17 6.48 Yes 71 -3.47 No 0 0 No -16 0.69 Yes 53 50.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68806969 + NM_133509 RAD51B 0 . . . 2.33 68.56 36 6.16 Yes 14 0.56 No 0 0 No -35 0.56 No 38 80.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59885093 - NM_032043 BRIP1 0 . . . 1.45 68.13 15 4.61 No 34 -3.19 No 0 0 No -57 0.86 Yes 43 69.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37041972 + NM_000249 MLH1 0 . . . 1.5 74.09 16 5.04 No 56 0.64 No 0 0 No -20 0.56 No 49 65.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29130764 - NM_001005735 CHEK2 0 . . . 6.24 82.08 49 7.14 Yes 19 0.78 Yes 0 0 No -29 0.66 No 47 41.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105183866 + NM_021930 RINT1 0 . . . 6.5 74.87 20 5.1 No 14 0.52 No 0 0 No -19 0.68 Yes 44 81.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108167754 + NM_000051 ATM 0 . . . 5.95 73.45 25 5.1 No 20 0.85 Yes 0 0 No -24 0.95 Yes 34 61.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68645522 + NM_133509 RAD51B 0 . . . 5.41 74.08 47 7.03 Yes 25 1.21 Yes 0 0 No -46 0.88 Yes 46 68.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68718745 + NM_133509 RAD51B 0 . . . 2.31 81.54 38 6.5 Yes 52 -3.13 No 0 0 No -23 0.74 Yes 50 80.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41233550 - NM_007294 BRCA1 0 . . . 0.81 0 54 4.93 No 42 -2.32 No 0 0 No -38 0.56 No 50 50.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68325107 + NM_133509 RAD51B 0 . . . 1.78 75.27 36 4.45 No 65 -4.86 No 0 0 No -18 0.69 Yes 52 28.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89631013 + NM_000314 PTEN 0 . . . 7.26 73.03 14 4.47 No 13 1.28 Yes 0 0 No -28 0.3 No 45 70.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68849016 + NM_133509 RAD51B 0 . . . 2.41 69.5 15 5.6 Yes 15 -1.76 No 0 0 No -23 0.56 No 43 73.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69051137 + NM_133509 RAD51B 0 . . . 2.92 78.93 20 5.02 No 60 1.57 Yes 0 0 No -19 0.25 No 48 78.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32903044 + NM_000059 BRCA2 0 . . . 4.57 62.77 24 5 No 55 1.11 Yes 0 0 No -23 0.5 No 33 62.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68792876 + NM_133509 RAD51B 0 . . . 1.84 85.37 21 5.83 Yes 33 1.13 Yes 0 0 No -24 0.51 No 50 55.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68953826 + NM_133509 RAD51B 0 . . . 6.43 85.88 62 5.55 No 69 -3.33 No 0 0 No -51 0.69 Yes 40 46.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108168826 + NM_000051 ATM 0 . . . 4.97 86.92 30 5.48 No 4 0.26 No 0 0 No -32 0.72 Yes 50 47.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90951598 - NM_002485 NBN 0 . . . 7.03 83.01 29 5.92 Yes 13 0.48 No 0 0 No -28 0.88 Yes 45 94.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68836844 + NM_133509 RAD51B 0 . . . 3.21 73.42 36 4.87 No 60 1.62 Yes 0 0 No -25 0.71 Yes 35 49.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21982303 - NM_000077 CDKN2A 0 . . . 1.36 68.11 14 4.9 No 1 0.48 No 0 0 No -49 0.21 No 47 78.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89728442 + NM_000314 PTEN 0 . . . 4.52 77.74 36 6.03 Yes 6 0.84 Yes 0 0 No -38 0.69 Yes 46 60.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59845384 - NM_032043 BRIP1 0 . . . 2.05 73.81 19 5.65 Yes -4 0.02 No 0 0 No -26 0.91 Yes 50 57.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59810827 - NM_032043 BRIP1 0 . . . 5.21 84.58 21 4.86 No 74 -4.3 No 0 0 No -20 0.61 No 40 21.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75508694 - NM_001040108 MLH3 0 . . . 2.07 87.99 29 5.92 Yes 73 -2.97 No 0 0 No -36 0.57 No 48 33.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37086235 + NM_000249 MLH1 0 . . . 6.2 78.39 20 8 Yes 22 -0.11 No 0 0 No -19 0.6 No 35 67.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68963363 + NM_133509 RAD51B 0 . . . 6.45 87.71 25 3.88 No 66 0.52 No 0 0 No -28 0.79 Yes 38 49.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69011942 + NM_133509 RAD51B 0 . . . 3.01 79.58 20 6.06 Yes 27 0.2 No 0 0 No -20 0.66 Yes 31 90.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94212011 - NM_005591 MRE11 0 . . . 3.82 67.21 32 6.08 Yes 46 1.81 Yes 0 0 No -26 0.56 No 12 83.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215609074 - NM_000465 BARD1 0 . . . 5.51 78.42 30 5.39 No 6 1.19 Yes 0 0 No -29 0.82 Yes 43 57.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68292934 + NM_133509 RAD51B 0 . . . 7 73.3 25 5 No 1 0.58 No 0 0 No -24 0.84 Yes 43 71.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68943626 + NM_133509 RAD51B 0 . . . 0.66 0 19 8.66 Yes 4 0.91 Yes 0 0 No -26 0.6 No 30 59.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90950917 - NM_002485 NBN 0 . . . 0.08 0 19 4.86 No 66 0.49 No 0 0 No -25 0.88 Yes 44 66.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59869953 - NM_032043 BRIP1 0 . . . 2.76 59.56 13 4.3 No 24 2.2 Yes 0 0 No -23 0.62 No 34 86.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68613319 + NM_133509 RAD51B 0 . . . 4.25 80.39 22 7.37 Yes 60 -2.42 No 0 0 No -21 0.63 No 47 79.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108130721 + NM_000051 ATM 0 . . . 3.02 67.83 60 7.4 Yes 67 0.3 No 0 0 No -35 0.71 Yes 37 83.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190676725 + NM_000534 PMS1 0 . . . 1.13 70.54 30 6.04 Yes 41 1.49 Yes 0 0 No -29 0.89 Yes 44 28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108117275 + NM_000051 ATM 0 . . . 0.59 64.17 15 5.48 No 42 0.74 No 0 0 No -26 0.51 No 43 57.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47719106 + NM_000251 MSH2 0 . . . 6.89 83.88 14 5.1 No 11 0.89 Yes 0 0 No -24 0.82 Yes 41 94.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108154023 + NM_000051 ATM 0 . . . 7.93 81.93 10 5.57 Yes 76 0.43 No 0 0 No -24 0.42 No 23 66.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32891679 + NM_000059 BRCA2 0 . . . 0.9 0 21 7.28 Yes 52 0.26 No 0 0 No -20 0.53 No 55 74.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68899726 + NM_133509 RAD51B 0 . . . 5.33 73.88 65 7.03 Yes 36 0.94 Yes 0 0 No -26 0.77 Yes 39 82.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68746180 + NM_133509 RAD51B 0 . . . 3.19 74.96 14 5.52 No 43 0.35 No 0 0 No -22 0.46 No 24 86.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37088934 + NM_000249 MLH1 0 . . . 4.78 70.86 15 4.58 No 5 1.66 Yes 0 0 No -42 0.37 No 39 84.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6038010 - NM_000535 PMS2 0 . . . 1.36 69.59 38 6.63 Yes 11 0.36 No 0 0 No -30 0.22 No 40 40.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68453633 + NM_133509 RAD51B 0 . . . 2.24 80.12 15 4.58 No 60 1.07 Yes 0 0 No -23 0.49 No 51 84.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89625603 + NM_000314 PTEN 0 . . . 9.56 89.07 16 4.69 No 57 -3.68 No 0 0 No -19 0.48 No 37 77.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108227509 + NM_000051 ATM 0 . . . 7.93 81.14 22 6.28 Yes 68 0.8 Yes 0 0 No -24 0.69 Yes 52 81.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37044141 + NM_000249 MLH1 0 . . . 2.22 70.75 26 5.05 No 14 0.44 No 0 0 No -28 0.77 Yes 44 73.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108184533 + NM_000051 ATM 0 . . . 2.41 73.05 20 6.11 Yes 65 -3.98 No 0 0 No -32 0.73 Yes 34 40.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89630913 + NM_000314 PTEN 0 . . . 5.67 68.85 16 4.64 No 37 0.96 Yes 0 0 No -26 0.41 No 37 48.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56800381 + NM_058216 RAD51C 0 . . . 0.28 63.81 41 5.6 Yes -3 0.26 No 0 0 No -29 0.75 Yes 49 81.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68467603 + NM_133509 RAD51B 0 . . . 5.66 68.27 19 5.65 Yes 33 0.42 No 0 0 No -18 0.6 No 40 70.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56789933 + NM_058216 RAD51C 0 . . . 0.09 74.68 18 6.29 Yes 4 0.41 No 0 0 No -26 0.54 No 54 87.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69034544 + NM_133509 RAD51B 0 . . . 6.44 78.49 22 4.8 No 11 0.11 No 0 0 No -21 0.96 Yes 47 66.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68940427 + NM_133509 RAD51B 0 . . . 10.57 86.37 22 5.29 No 11 0.98 Yes 0 0 No -21 0.67 Yes 47 71.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37084770 + NM_000249 MLH1 0 . . . 3.75 84.95 18 4.9 No 56 1.04 Yes 0 0 No -21 0.56 No 15 81.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56805673 + NM_058216 RAD51C 0 . . . 3.6 76.65 36 5.92 Yes 68 0.33 No 0 0 No -25 0.58 No 39 62.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47803448 + NM_000251 MSH2 0 . . . 7.11 76.25 16 5.83 Yes 44 1.51 Yes 0 0 No -15 0.3 No 41 71.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37074816 + NM_000249 MLH1 0 . . . 7.22 81.8 38 7.11 Yes 30 0.74 No 0 0 No -37 0.94 Yes 37 51.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68436703 + NM_133509 RAD51B 0 . . . 6.79 83.7 28 4.17 No 11 1.16 Yes 0 0 No -20 0.77 Yes 47 95.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56808691 + NM_058216 RAD51C 0 . . . 0.52 70.33 29 5.92 Yes 30 0.84 Yes 0 0 No -28 0.65 No 16 52.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37062366 + NM_000249 MLH1 0 . . . 2.3 76.02 23 4.9 No NA NA NA 0 0 No -22 0.9 Yes 46 49.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68360842 + NM_133509 RAD51B 0 . . . 5.55 79.52 20 5.45 No 39 2.31 Yes 0 0 No -23 0.7 Yes 19 51.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59865872 - NM_032043 BRIP1 0 . . . 3.41 67.99 17 5.13 No 19 1.66 Yes 0 0 No -22 0.51 No 39 96.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152347806 - NM_005431 XRCC2 0 . . . 5.2 85.02 26 5.57 Yes 5 1.09 Yes 0 0 No -28 0.76 Yes 53 78.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47798088 + NM_000251 MSH2 0 . . . 1.99 0 21 5.02 No -4 0.28 No 0 0 No -20 0.61 No 48 51.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68643378 + NM_133509 RAD51B 0 . . . 5.95 78.19 32 6.16 Yes 35 0.38 No 0 0 No -31 0.63 No 47 86.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41240901 - NM_007294 BRCA1 0 . . . 5.66 88.05 31 5.97 Yes 70 1.03 Yes 0 0 No -31 0.87 Yes 41 82.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47685483 + NM_000251 MSH2 0 . . . 7.01 84.74 16 3.96 No 7 0.54 No 0 0 No -26 0.78 Yes 47 54.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59915260 - NM_032043 BRIP1 0 . . . 7.85 79.86 29 5.92 Yes 63 -1.01 No 0 0 No -28 0.73 Yes 37 70.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47768266 + NM_000251 MSH2 0 . . . 4.58 77.02 15 4.58 No 58 1.09 Yes 0 0 No -18 0.54 No 47 51.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21991964 - NM_000077 CDKN2A 0 . . . 2.98 81.51 19 5 No 43 0.46 No 0 0 No -18 0.62 No 42 52.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94148925 - NM_005591 MRE11 0 . . . 2.81 70.1 42 6.11 Yes 58 0.49 No 0 0 No -24 0.52 No 47 77.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104165583 - NM_001100119 XRCC3 0 . . . 3.39 65.33 17 4.8 No 64 -4.21 No 0 0 No -20 0.58 No 40 49.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68527996 + NM_133509 RAD51B 0 . . . 0.72 77.77 18 4.77 No 34 1.05 Yes 0 0 No -20 0.52 No 24 52.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68806921 + NM_133509 RAD51B 0 . . . 8.08 85.34 26 4.87 No 25 0.41 No 0 0 No -26 0.83 Yes 38 83.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68831647 + NM_133509 RAD51B 0 . . . 8.26 77.98 13 4.81 No 35 0.86 Yes 0 0 No -19 0.63 No 38 68.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68699223 + NM_133509 RAD51B 0 . . . 2.76 75.11 15 4.58 No 39 1.44 Yes 0 0 No -24 0.71 Yes 47 69.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68750549 + NM_133509 RAD51B 0 . . . 1.86 65.99 51 6.21 Yes NA NA NA 0 0 No -15 0.43 No 32 60.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94171098 - NM_005591 MRE11 0 . . . 0.42 74.73 60 6.36 Yes 36 1.05 Yes 0 0 No -32 0.77 Yes 22 79.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59861299 - NM_032043 BRIP1 0 . . . 0.36 67.33 30 6 Yes 76 0.93 Yes 27 0.92 Yes -24 0.72 Yes 47 70.62 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68996440 + NM_133509 RAD51B 0 . . . 4.84 65.05 24 4.86 No 73 -3.89 No 0 0 No -23 0.55 No 56 35.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41216338 - NM_007294 BRCA1 0 . . . 4.55 71.3 23 6.08 Yes 4 0.24 No 0 0 No -22 0.7 Yes 32 78.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68362287 + NM_133509 RAD51B 0 . . . 1.94 72.59 22 4.9 No 40 1.13 Yes 0 0 No -21 0.53 No 38 79.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41221082 - NM_007294 BRCA1 0 . . . 5.16 73.22 33 6.32 Yes 1 1.07 Yes 0 0 No -29 0.6 No 49 35.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68886399 + NM_133509 RAD51B 0 . . . 4.44 73.98 15 7.68 Yes 20 1.15 Yes 0 0 No -31 0.69 Yes 38 95.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90998725 - NM_002485 NBN 0 . . . 2.62 72.78 28 5.16 No 45 1.25 Yes 0 0 No -27 0.56 No 50 74.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41210855 - NM_007294 BRCA1 0 . . . 3.95 70 24 5.22 No 49 1.35 Yes 0 0 No -24 0.74 Yes 40 96.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69044752 + NM_133509 RAD51B 0 . . . 6.95 76.69 42 4.24 No 27 1.05 Yes 0 0 No -23 0.68 Yes 31 80.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89632099 + NM_000314 PTEN 0 . . . 2.94 72.15 38 5.55 No 44 0.85 Yes 0 0 No -25 0.81 Yes 46 86.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47644854 + NM_000251 MSH2 0 . . . 2.44 64.24 22 3.88 No 49 0.75 No 0 0 No -19 0.79 Yes 42 43.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68792423 + NM_133509 RAD51B 0 . . . 8.19 83.26 16 4.69 No 51 -3.91 No 0 0 No -34 0.32 No 43 87.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68958377 + NM_133509 RAD51B 0 . . . 5.32 81.88 44 7.54 Yes 12 0.4 No 0 0 No -37 0.46 No 46 69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40993137 + NM_001164269 RAD51 0 . . . 7.33 71.79 18 4.78 No 72 -2.56 No 0 0 No -29 0.64 No 42 74.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59789445 - NM_032043 BRIP1 0 . . . 3.75 71.96 25 5.57 Yes 41 0.34 No 0 0 No -24 0.62 No 28 42.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68576425 + NM_133509 RAD51B 0 . . . 1.48 73.77 25 5.55 No -2 0.01 No 0 0 No -24 0.55 No 51 58.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90952786 - NM_002485 NBN 0 . . . 4.77 86.04 21 5.57 Yes 12 -0.94 No 0 0 No -20 0.65 No 46 52.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59934839 - NM_032043 BRIP1 0 . . . 3.15 68.34 36 5.56 Yes 23 1 Yes 0 0 No -22 0.79 Yes 40 68.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131958738 + NM_005732 RAD50 0 . . . 0.35 80.85 16 5.1 No 9 0.92 Yes 0 0 No -46 0.52 No 45 87.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41227227 - NM_007294 BRCA1 0 . . . 1.82 76.55 19 5 No 10 1 Yes 0 0 No -18 0.48 No 48 62.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94171291 - NM_005591 MRE11 0 . . . 2.14 83.57 31 6.06 Yes 72 -1.89 No 0 0 No -24 0.52 No 28 88.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59858012 - NM_032043 BRIP1 0 . . . 5.75 91.93 22 5.81 Yes 9 0.95 Yes 0 0 No -21 0.33 No 49 96.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89692497 + NM_000314 PTEN 0 . . . 4.69 74.37 26 4.95 No 40 0.76 No 0 0 No -25 0.44 No 49 77.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68998214 + NM_133509 RAD51B 0 . . . 2.01 73.57 30 6.7 Yes 29 -2.5 No 0 0 No -29 0.72 Yes 39 35.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68770055 + NM_004360 CDH1 0 . . . 1.08 62.93 29 7.35 Yes -2 1.45 Yes 0 0 No -28 0.92 Yes 60 37.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47687828 + NM_000251 MSH2 0 . . . 9.33 88.03 18 7 Yes 28 0.18 No 0 0 No -17 0.45 No 30 86.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105174538 + NM_021930 RINT1 0 . . . 2.62 84.41 51 5.76 Yes 6 0.91 Yes 0 0 No -26 0.45 No 40 55.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108189522 + NM_000051 ATM 0 . . . 0.84 71.4 19 5.7 Yes 32 0.34 No 0 0 No -29 0.38 No 59 28.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59834200 - NM_032043 BRIP1 0 . . . 3.16 73.23 22 4.69 No 75 -6.53 No 0 0 No -26 0.63 No 44 51.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47766399 + NM_000251 MSH2 0 . . . 2.83 73.93 26 5.65 Yes 31 1.14 Yes 0 0 No -30 0.73 Yes 38 87.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56807300 + NM_058216 RAD51C 0 . . . 7.45 82.44 29 3.72 No 9 0.53 No 0 0 No -23 0.34 No 38 70.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59789621 - NM_032043 BRIP1 0 . . . 1.27 76.63 14 4.2 No 58 -3.87 No 0 0 No -27 0.96 Yes 48 84.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108113400 + NM_000051 ATM 0 . . . 6.92 84.27 36 5.43 No 66 0.84 Yes 0 0 No -35 0.9 Yes 48 35.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68954502 + NM_133509 RAD51B 0 . . . 3.69 83.47 24 6.28 Yes 60 -5.29 No 0 0 No -24 0.68 Yes 53 48.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68383924 + NM_133509 RAD51B 0 . . . 4.29 73.57 27 4.4 No 34 0.82 Yes 0 0 No -20 0.46 No 45 92.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29089070 - NM_001005735 CHEK2 0 . . . 6.3 68.53 27 4.79 No 74 1.05 Yes 0 0 No -27 0.38 No 42 84.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68498211 + NM_133509 RAD51B 0 . . . 0.69 64.35 14 5 No 66 -5.74 No 0 0 No -18 0.34 No 36 56.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131957971 + NM_005732 RAD50 0 . . . 1.79 85.76 36 6.33 Yes 33 1.13 Yes 0 0 No -19 0.53 No 50 56.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68732894 + NM_133509 RAD51B 0 . . . 6.04 73.27 29 6.7 Yes 13 1.21 Yes 0 0 No -28 0.94 Yes 45 79.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47784505 + NM_000251 MSH2 0 . . . 3.92 77.59 30 5.65 Yes 45 1.41 Yes 0 0 No -29 0.74 Yes 33 93.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68931644 + NM_133509 RAD51B 0 . . . 7.06 84.81 32 6.06 Yes 17 1.12 Yes 0 0 No -31 0.69 Yes 41 67.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131922890 + NM_005732 RAD50 0 . . . 3.07 69.09 27 5.48 No 7 0.98 Yes 0 0 No -26 0.45 No 44 61.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68655494 + NM_133509 RAD51B 0 . . . 0.42 0 28 5.57 Yes 42 1 Yes 0 0 No -27 0.87 Yes 36 90.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68884284 + NM_133509 RAD51B 0 . . . 4.81 92.54 33 5.66 Yes 7 0.34 No 0 0 No -32 0.32 No 47 78.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68685286 + NM_133509 RAD51B 0 . . . 0.22 61.65 42 6.78 Yes 51 1.55 Yes 0 0 No -26 0.58 No 47 31.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47725525 + NM_000251 MSH2 0 . . . 2.7 62.39 25 6.08 Yes 32 1.71 Yes 0 0 No -24 0.71 Yes 26 52.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108225221 + NM_000051 ATM 0 . . . 2.97 69.78 35 4.54 No 69 -0.94 No 0 0 No -32 0.66 No 53 71.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48024741 + NM_000179 MSH6 0 . . . 4.12 70.8 28 6.62 Yes 56 1.16 Yes 0 0 No -27 0.73 Yes 47 81.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190670415 + NM_000534 PMS1 0 . . . 3.89 66.45 35 5.49 No -2 0.31 No 0 0 No -34 0.65 No 43 36.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950982 + NM_005732 RAD50 0 . . . 5.35 0 21 6 Yes 44 0.93 Yes 0 0 No -20 0.7 Yes 46 71.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94187766 - NM_005591 MRE11 0 . . . 4.41 75.09 34 5.27 No 28 0.19 No 0 0 No -26 0.53 No 42 52.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21980764 - NM_000077 CDKN2A 0 . . . 5.07 71.62 16 6.11 Yes 34 1.18 Yes 0 0 No -24 0.5 No 24 58.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68561703 + NM_133509 RAD51B 0 . . . 4.9 81.37 36 5.92 Yes 61 0.36 No 0 0 No -31 0.61 No 53 34.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68531298 + NM_133509 RAD51B 0 . . . 4.29 68.61 22 4.76 No 56 1.03 Yes 0 0 No -21 0.56 No 30 73.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41263055 - NM_007294 BRCA1 0 . . . 4.79 79.06 14 5.81 Yes 71 1.29 Yes 0 0 No -33 0.34 No 44 59.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48025587 + NM_000179 MSH6 0 . . . 2.37 76.67 24 4.9 No 12 1.21 Yes 0 0 No -23 0.94 Yes 46 95.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94149817 - NM_005591 MRE11 0 . . . 1.24 0 18 4.9 No 47 1.58 Yes 0 0 No -38 0.44 No 11 93.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94149402 - NM_005591 MRE11 0 . . . 7.37 84.9 28 4.32 No 42 1.01 Yes 0 0 No -27 0.5 No 44 66.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47759019 + NM_000251 MSH2 0 . . . 5.2 82.68 24 5.3 No 12 0.52 No 0 0 No -44 0.6 No 46 91.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89701645 + NM_000314 PTEN 0 . . . 0.43 79.85 36 6.08 Yes 10 0.08 No 0 0 No -35 0.57 No 48 77.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47640490 + NM_000251 MSH2 0 . . . 2.67 78.97 27 4.06 No 7 1.16 Yes 0 0 No -26 0.65 No 51 76.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32898328 + NM_000059 BRCA2 0 . . . 5.18 80.95 22 3.42 No 69 0.11 No 0 0 No -17 0.84 Yes 48 55.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68566111 + NM_133509 RAD51B 0 . . . 6.1 88.24 18 7 Yes 3 1.34 Yes 0 0 No -17 0.5 No 51 87.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68795453 + NM_004360 CDH1 0 . . . 6.59 91.1 32 6.25 Yes 71 -3.24 No 0 0 No -27 0.9 Yes 51 49.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89631332 + NM_000314 PTEN 0 . . . 4.3 76.39 13 4 No 64 -0.61 No 0 0 No -25 0.54 No 44 59.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108113477 + NM_000051 ATM 0 . . . 6.1 83.72 17 5.56 Yes 10 0.83 Yes 0 0 No -16 0.65 No 48 63.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68825171 + NM_133509 RAD51B 0 . . . 1.04 74.76 33 6.34 Yes 59 -1.01 No 0 0 No -32 0.83 Yes 37 82.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59865652 - NM_032043 BRIP1 0 . . . 5.37 82.29 12 6.39 Yes 55 0.36 No 0 0 No -28 0.63 No 40 71.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68516352 + NM_133509 RAD51B 0 . . . 0.09 68.78 30 5.67 Yes 43 1.05 Yes 0 0 No -23 0.79 Yes 43 40.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105172594 + NM_021930 RINT1 0 . . . 2.19 70.87 22 4.9 No 54 0.77 Yes 0 0 No -21 0.75 Yes 62 20.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59806928 - NM_032043 BRIP1 0 . . . 6.13 89.21 25 5.37 No 34 1.02 Yes 0 0 No -24 0.72 Yes 52 55.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68712049 + NM_133509 RAD51B 0 . . . 2.88 73.85 46 5.37 No 74 1.02 Yes 0 0 No -31 0.46 No 46 48.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131908319 + NM_005732 RAD50 0 . . . 9.12 84.98 32 6.08 Yes 4 0.61 No 0 0 No -31 0.76 Yes 43 46.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59837966 - NM_032043 BRIP1 0 . . . 4.1 78.32 37 5.99 Yes 13 0.88 Yes 0 0 No -29 0.84 Yes 39 68.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68405856 + NM_133509 RAD51B 0 . . . 1.98 71.65 48 7.35 Yes 16 0.36 No 0 0 No -47 0.57 No 47 64.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104178661 - NM_001100119 XRCC3 0 . . . 7.39 81.26 16 4.35 No 75 1.05 Yes 0 0 No -15 0.23 No 36 75.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68803771 + NM_133509 RAD51B 0 . . . 4.34 77.98 20 7.14 Yes 39 1.31 Yes 0 0 No -19 0.65 No 48 56.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59889944 - NM_032043 BRIP1 0 . . . 3.66 86.04 27 6.79 Yes 5 0.29 No 0 0 No -26 0.89 Yes 50 77.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33430049 - NM_002878 RAD51D 0 . . . 8.44 85.86 27 5.28 No 55 0.6 No 0 0 No -27 0.87 Yes 55 33.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59787303 - NM_032043 BRIP1 0 . . . 2.14 80.43 13 4.36 No 6 0.83 Yes 0 0 No -40 0.67 Yes 44 61.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68608221 + NM_133509 RAD51B 0 . . . 4.95 80.67 27 5.62 Yes 40 -3.32 No 0 0 No -26 0.79 Yes 47 52.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84392076 - NM_139076 FAM175A 0 . . . 2.1 63.57 29 5.29 No 2 1.19 Yes 0 0 No -28 0.69 Yes 46 47.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215609712 - NM_000465 BARD1 0 . . . 2.77 71.39 24 4.89 No 70 -2.62 No 0 0 No -45 0.63 No 32 56.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152353391 - NM_005431 XRCC2 0 . . . 2.93 73.64 11 4.8 No 56 1.04 Yes 0 0 No -38 0.85 Yes 55 43.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105205536 + NM_021930 RINT1 0 . . . 1.39 72.8 46 7.09 Yes 55 0.8 Yes 0 0 No -24 0.83 Yes 24 74.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21983944 - NM_000077 CDKN2A 0 . . . 0.89 73.09 36 6.73 Yes 48 1.61 Yes 0 0 No -35 0.78 Yes 37 83.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23637017 - NM_024675 PALB2 0 . . . 0.76 86.33 26 5.15 No 34 1 Yes 0 0 No -25 0.62 No 50 56.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68821859 + NM_004360 CDH1 0 . . . 1.66 0 21 5.1 No 45 1.44 Yes 0 0 No -20 0.9 Yes 38 36.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68705618 + NM_133509 RAD51B 0 . . . 5.39 74.08 36 6.48 Yes 40 0.98 Yes 0 0 No -35 0.47 No 46 92.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68914648 + NM_133509 RAD51B 0 . . . 1.23 67.3 26 5 No 71 0.41 No 0 0 No -25 0.86 Yes 44 46.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37061426 + NM_000249 MLH1 0 . . . 2.1 77.24 17 5.29 No 33 1.02 Yes 0 0 No -21 0.58 No 42 50.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89654539 + NM_000314 PTEN 0 . . . 4.36 60.8 22 4.8 No 0 0.57 No 0 0 No -52 0.37 No 51 61.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190740565 + NM_000534 PMS1 0 . . . 0.73 74.23 18 5.34 No 53 0.45 No 0 0 No -17 0.58 No 36 59.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68810442 + NM_133509 RAD51B 0 . . . 0.69 77.46 28 4.81 No 76 -5.19 No 0 0 No -39 0.51 No 53 55.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94222192 - NM_005591 MRE11 0 . . . 6.14 67.48 28 5.04 No 70 0.22 No 0 0 No -27 0.83 Yes 39 49.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215667371 - NM_000465 BARD1 0 . . . 0.39 71.44 34 5.13 No 37 0.49 No 0 0 No -22 0.73 Yes 39 62.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68533058 + NM_133509 RAD51B 0 . . . 1.44 0 15 5.57 Yes 36 -3.01 No 0 0 No -14 0.33 No 50 21.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32889538 + NM_000059 BRCA2 0 . . . 1.39 0 27 3.59 No 28 1.08 Yes 0 0 No -21 0.56 No 30 77.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59892832 - NM_032043 BRIP1 0 . . . 10.2 92.83 15 4.58 No 21 0.21 No 0 0 No -20 0.59 No 34 75.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190740863 + NM_000534 PMS1 0 . . . 3.78 77.13 22 3.98 No 31 0.44 No 0 0 No -21 0.6 No 46 69.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108137180 + NM_000051 ATM 0 . . . 0.58 73.32 16 5.06 No 74 -1.73 No 0 0 No -20 0.73 Yes 13 34.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89705634 + NM_000314 PTEN 0 . . . 2.32 80.2 28 5.87 Yes -2 0.41 No 0 0 No -32 0.59 No 48 91.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68557692 + NM_133509 RAD51B 0 . . . 6.79 73.02 49 6.26 Yes 50 1 Yes 0 0 No -33 0.47 No 38 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68975348 + NM_133509 RAD51B 0 . . . 3.92 83.57 30 5.79 Yes 23 1.64 Yes 0 0 No -29 0.92 Yes 35 77.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68666945 + NM_133509 RAD51B 0 . . . 6.49 81.39 35 5.73 Yes 45 1.53 Yes 0 0 No -34 0.79 Yes 34 84.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108233295 + NM_000051 ATM 0 . . . 1.05 61.38 12 4.24 No 49 -4.57 No 0 0 No -38 0.48 No 47 45.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59917944 - NM_032043 BRIP1 0 . . . 0.9 70.16 38 8.54 Yes 25 1.09 Yes 0 0 No -37 0.81 Yes 15 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108211825 + NM_000051 ATM 0 . . . 10.33 89.28 20 7.14 Yes 14 0.99 Yes 0 0 No -19 0.71 Yes 44 66.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59910108 - NM_032043 BRIP1 0 . . . 0.13 71.17 17 5.74 Yes 3 1.48 Yes 0 0 No -26 0.79 Yes 51 59.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68801503 + NM_004360 CDH1 0 . . . 4.34 83.68 17 5.57 Yes 75 -2.39 No 0 0 No -16 0.77 Yes 36 63.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59883303 - NM_032043 BRIP1 0 . . . 1.65 67.48 19 4.46 No 71 0.75 No 0 0 No -18 0.84 Yes 44 49.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68560368 + NM_133509 RAD51B 0 . . . 2.22 65.97 27 5.38 No 6 1 Yes 0 0 No -26 0.76 Yes 32 61.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23649335 - NM_024675 PALB2 0 . . . 2.28 66.56 38 6.24 Yes 46 -3.89 No 0 0 No -37 0.77 Yes 48 60.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108128465 + NM_000051 ATM 0 . . . 1.25 84.22 24 4.8 No 21 1.69 Yes 0 0 No -47 0.41 No 51 74.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68814931 + NM_004360 CDH1 0 . . . 1.04 75.45 29 5.39 No 69 0.12 No 0 0 No -28 0.59 No 48 43.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89662912 + NM_000314 PTEN 0 . . . 3.54 70.07 42 6.48 Yes 64 1.15 Yes 0 0 No -32 0.37 No 47 69.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23641163 - NM_024675 PALB2 0 . . . 4.46 81.79 25 5.39 No 3 0.9 Yes 0 0 No -22 0.82 Yes 42 51.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47774726 + NM_000251 MSH2 0 . . . 1.5 76.65 11 4.53 No 33 0.82 Yes 0 0 No -18 0.76 Yes 20 45.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29082313 - NM_001005735 CHEK2 0 . . . 0.91 64.42 28 4.33 No 51 -4.78 No 0 0 No -31 0.46 No 22 41.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47715604 + NM_000251 MSH2 0 . . . 1.06 63.14 23 5.38 No 52 1.12 Yes 0 0 No -22 0.77 Yes 46 40.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47640747 + NM_000251 MSH2 0 . . . 5.8 90.92 29 5.29 No 52 1.13 Yes 0 0 No -28 0.36 No 6 13.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69113084 + NM_133509 RAD51B 0 . . . 9.28 82.01 24 4.54 No 4 2.03 Yes 0 0 No -24 0.56 No 41 56.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131971912 + NM_005732 RAD50 0 . . . 2.2 68.64 19 4.99 No 46 1.45 Yes 0 0 No -18 0.52 No 44 46.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68906056 + NM_133509 RAD51B 0 . . . 6.35 87.31 25 5.97 Yes 15 1.25 Yes 0 0 No -30 0.54 No 45 59.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6023805 - NM_000535 PMS2 0 . . . 4.12 82.72 24 4.42 No -1 0.22 No 0 0 No -24 0.57 No 37 80.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59862032 - NM_032043 BRIP1 0 . . . 11.29 79.95 26 5.1 No 9 2.29 Yes 0 0 No -25 0.82 Yes 49 73.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68567754 + NM_133509 RAD51B 0 . . . 4.21 75.2 25 5.57 Yes 75 -2.73 No 0 0 No -24 0.65 No 42 49.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59940472 - NM_032043 BRIP1 0 . . . 4.38 0 21 4.04 No 64 -2.21 No 0 0 No -24 0.3 No 35 40.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69087189 + NM_133509 RAD51B 0 . . . 5.45 70.74 14 4.86 No 69 1.83 Yes 0 0 No -30 0.3 No 40 48.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68287911 + NM_133509 RAD51B 0 . . . 2.32 67.05 24 4.89 No 75 0.41 No 0 0 No -23 0.35 No 39 43.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94184992 - NM_005591 MRE11 0 . . . 0.16 63.83 46 4.91 No 47 1.29 Yes 0 0 No -32 0.49 No 16 70.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105173088 + NM_021930 RINT1 0 . . . 2.68 69.7 31 5.55 No 71 0.31 No 0 0 No -30 0.82 Yes 51 59.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90986957 - NM_002485 NBN 0 . . . 3.99 60.73 33 5.6 Yes 15 1.09 Yes 0 0 No -28 0.6 No 43 73.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68401736 + NM_133509 RAD51B 0 . . . 10.6 86.69 25 5.29 No 64 1.25 Yes 0 0 No -24 0.88 Yes 45 89.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23617561 - NM_024675 PALB2 0 . . . 7.21 85.05 36 7.78 Yes 6 1.34 Yes 0 0 No -35 0.58 No 52 81.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56792275 + NM_058216 RAD51C 0 . . . 3.91 0 22 4.79 No 46 0.46 No 0 0 No -21 0.64 No 51 84.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68811335 + NM_133509 RAD51B 0 . . . 0.92 76.63 26 5.66 Yes 58 -4.03 No 0 0 No -26 0.81 Yes 53 54.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68922725 + NM_133509 RAD51B 0 . . . 2.09 60.82 27 5.34 No 40 0.94 Yes 0 0 No -26 0.59 No 48 62.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41227836 - NM_007294 BRCA1 0 . . . 3.68 0 46 6.89 Yes 45 0.45 No 0 0 No -45 0.61 No 52 83.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68776925 + NM_133509 RAD51B 0 . . . 6.46 73.74 26 5 No 20 0.03 No 0 0 No -25 0.96 Yes 38 84.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52445996 - NM_004656 BAP1 0 . . . 1.78 80.65 26 4.98 No 3 1.13 Yes 0 0 No -25 0.83 Yes 51 74.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68733843 + NM_133509 RAD51B 0 . . . 3.89 0 16 4.64 No 11 1.1 Yes 0 0 No -15 0.45 No 47 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33437824 - NM_002878 RAD51D 0 . . . 7.47 87.64 29 3.89 No 68 0.87 Yes 0 0 No -28 0.59 No 46 83.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68451451 + NM_133509 RAD51B 0 . . . 0.5 76.91 34 4.73 No 31 1.03 Yes 0 0 No -25 0.46 No 38 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41240128 - NM_007294 BRCA1 0 . . . 5.47 77.88 24 6.37 Yes 39 0.64 No 0 0 No -23 0.67 Yes 50 48.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94177434 - NM_005591 MRE11 0 . . . 3.78 77.19 19 4.23 No 32 0.08 No 0 0 No -18 0.53 No 44 84.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68738979 + NM_133509 RAD51B 0 . . . 9.45 88.77 24 5.13 No 21 0.33 No 0 0 No -27 0.73 Yes 46 95.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32936096 + NM_000059 BRCA2 0 . . . 2.44 72.22 23 5.39 No 42 0.39 No 0 0 No -22 0.75 Yes 42 40.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190660002 + NM_000534 PMS1 0 . . . 3.47 74.02 18 5.5 No 46 0.13 No 0 0 No -17 0.33 No 45 68.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37054587 + NM_000249 MLH1 0 . . . 5.01 80.64 42 6.17 Yes 76 1.16 Yes 0 0 No -33 0.69 Yes 49 89.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68392404 + NM_133509 RAD51B 0 . . . 9.41 92.19 14 5 No 10 2.19 Yes 0 0 No -43 0.62 No 48 88.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105177622 + NM_021930 RINT1 0 . . . 6.61 90.92 38 7.53 Yes 54 1.04 Yes 0 0 No -24 0.57 No 18 73.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152357292 - NM_005431 XRCC2 0 . . . 3.53 71.28 28 5.38 No 28 0.29 No 0 0 No -23 0.45 No 46 75.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152354380 - NM_005431 XRCC2 0 . . . 5.98 81.39 44 4.52 No 66 -2.96 No 0 0 No -26 0.72 Yes 45 49.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7584785 - NM_000546 TP53 0 . . . 0.05 74.68 14 5.3 No 53 0.63 No 0 0 No -17 0.56 No 46 38.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6036303 - NM_000535 PMS2 0 . . . 1.57 74.52 15 5.57 Yes 75 1.31 Yes 0 0 No -28 0.45 No 47 85.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68975425 + NM_133509 RAD51B 0 . . . 3.75 76.55 55 7.69 Yes NA NA NA 0 0 No -29 0.41 No 50 81.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68629131 + NM_133509 RAD51B 0 . . . 4.53 74.55 34 5.62 Yes 1 0.99 Yes 0 0 No -31 0.93 Yes 45 48.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68727780 + NM_133509 RAD51B 0 . . . 5.65 87.09 18 4.9 No 71 2.08 Yes 0 0 No -17 0.32 No 48 93.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131950188 + NM_005732 RAD50 0 . . . 0.26 77.06 22 4.78 No 71 -6.46 No 0 0 No -21 0.86 Yes 34 81.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47658579 + NM_000251 MSH2 0 . . . 8.36 85.46 21 7.21 Yes 63 -3.81 No 0 0 No -20 0.79 Yes 42 78.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69044316 + NM_133509 RAD51B 0 . . . 7.78 86.42 14 5.19 No 9 0.19 No 0 0 No -20 0.43 No 49 76.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68483892 + NM_133509 RAD51B 0 . . . 2.16 71.26 16 4.24 No 21 0.75 No 0 0 No -19 0.66 No 43 54.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90957551 - NM_002485 NBN 0 . . . 3.16 80.06 34 5.95 Yes 65 0.2 No 0 0 No -23 0.9 Yes 46 90.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23614659 - NM_024675 PALB2 0 . . . 4.49 89.01 34 6.09 Yes 7 0.57 No 0 0 No -33 0.63 No 45 77.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215673827 - NM_000465 BARD1 0 . . . 6.89 76.65 22 4.8 No 72 0.41 No 0 0 No -21 0.95 Yes 40 78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68757404 + NM_133509 RAD51B 0 . . . 3.97 85.58 21 5.1 No 62 0.06 No 0 0 No -20 0.77 Yes 46 64.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33432143 - NM_002878 RAD51D 0 . . . 0.09 68.68 25 4.54 No -3 1.2 Yes 0 0 No -21 0.23 No 48 50.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190729490 + NM_000534 PMS1 0 . . . 2.83 62.87 30 5.74 Yes 9 0.59 No 0 0 No -26 0.59 No 49 69.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1208772 + NM_000455 STK11 0 . . . 2.56 72.8 42 6.93 Yes 70 1.1 Yes 0 0 No -41 0.95 Yes 53 38.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47677054 + NM_000251 MSH2 0 . . . 1.58 61.19 28 5.24 No 73 0.34 No 0 0 No -42 0.43 No 35 69.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108238079 + NM_000051 ATM 0 . . . 4.12 70.97 16 4.47 No 52 1.09 Yes 0 0 No -30 0.31 No 47 67.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68628571 + NM_133509 RAD51B 0 . . . 6.84 83.75 22 6.34 Yes 9 0.74 No 0 0 No -21 0.94 Yes 35 33.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89633379 + NM_000314 PTEN 0 . . . 2.89 63.35 12 4.66 No 46 -2.02 No 0 0 No -19 0.39 No 60 41.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59884851 - NM_032043 BRIP1 0 . . . 6.99 75.84 44 7.89 Yes 31 0.97 Yes 0 0 No -43 0.49 No 53 50.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37086284 + NM_000249 MLH1 0 . . . 1.51 0 22 5.29 No 39 -3.02 No 0 0 No -21 0.75 Yes 49 64.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32900595 + NM_000059 BRCA2 0 . . . 5.2 81.66 15 4.58 No -4 0.04 No 29 0.49 Yes -19 0.61 No 41 38.23 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 215621387 - NM_000465 BARD1 0 . . . 0.45 58.84 19 5 No 29 0.54 No 0 0 No -18 0.39 No 44 56.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37057653 + NM_000249 MLH1 0 . . . 3.28 77.57 12 3 No 52 0.91 Yes 0 0 No -20 0.3 No 46 78.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84394834 - NM_139076 FAM175A 0 . . . 0.59 55.06 34 5.74 Yes 27 0.78 Yes 0 0 No -22 0.69 Yes 31 71.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84407369 - NM_139076 FAM175A 0 . . . 0.84 74.68 20 5.57 Yes 64 0.61 No 0 0 No -19 0.47 No 52 33.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6039770 - NM_000535 PMS2 0 . . . 1.28 80.65 22 4.31 No 75 1.26 Yes 0 0 No -51 0.71 Yes 50 91.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108214465 + NM_000051 ATM 0 . . . 0.28 82.88 29 3.94 No 65 -4.07 No 0 0 No -23 0.55 No 45 74.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32942258 + NM_000059 BRCA2 0 . . . 3.12 68.95 11 4.04 No 16 1.11 Yes 0 0 No -17 0.43 No 42 92.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68744644 + NM_133509 RAD51B 0 . . . 3.66 80.12 30 5.48 No 7 1.16 Yes 0 0 No -28 0.35 No 51 90.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40992853 + NM_001164269 RAD51 0 . . . 2.43 63.6 45 6.83 Yes 55 1.07 Yes 0 0 No -23 0.53 No 38 61.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68743109 + NM_133509 RAD51B 0 . . . 6.93 76.07 18 5.74 Yes 75 1.29 Yes 0 0 No -33 0.53 No 42 83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56812794 + NM_058216 RAD51C 0 . . . 0.39 72.63 21 5 No 60 1.22 Yes 0 0 No -20 0.75 Yes 53 65.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68366544 + NM_133509 RAD51B 0 . . . 7.2 80.76 40 5.14 No 52 0.42 No 0 0 No -45 0.35 No 41 64.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47693947 + NM_000251 MSH2 0 . . . 7.15 79.11 33 5.11 No 67 -5.2 No 0 0 No -28 0.53 No 38 38.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891162 + NM_133509 RAD51B 0 . . . 0.72 80.67 19 4.08 No 14 -2.96 No 0 0 No -24 0.43 No 47 54.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68524896 + NM_133509 RAD51B 0 . . . 6.41 72.76 31 6.55 Yes 43 0.65 No 0 0 No -30 0.89 Yes 40 34.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59791450 - NM_032043 BRIP1 0 . . . 0.29 70.07 46 6.53 Yes 59 1.85 Yes 0 0 No -20 0.61 No 51 49.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68285715 + NM_133509 RAD51B 0 . . . 0.48 64.17 17 6.16 Yes 67 0.69 No 0 0 No -26 0.86 Yes 22 38.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68835514 + NM_133509 RAD51B 0 . . . 5.53 70.63 24 5.48 No 45 1.03 Yes 0 0 No -23 0.68 Yes 47 47.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68829782 + NM_133509 RAD51B 0 . . . 2.02 68.33 29 4.88 No 29 -2.03 No 0 0 No -28 0.88 Yes 48 25.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68520653 + NM_133509 RAD51B 0 . . . 3.63 79.48 14 4.45 No 45 1.07 Yes 0 0 No -21 0.79 Yes 55 32.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68986983 + NM_133509 RAD51B 0 . . . 2.95 75.03 36 7.67 Yes -3 0.43 No 0 0 No -35 0.58 No 42 89.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89621785 + NM_000314 PTEN 0 . . . 3.12 67.65 85 9.76 Yes 64 0.97 Yes 0 0 No -48 0.57 No 35 69.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41242658 - NM_007294 BRCA1 0 . . . 2.05 82.3 17 5.74 Yes 17 0.47 No 0 0 No -24 0.24 No 41 74.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1225045 + NM_000455 STK11 0 . . . 7.55 84.85 29 5.39 No 4 1.43 Yes 0 0 No -28 0.78 Yes 43 59.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47698709 + NM_000251 MSH2 0 . . . 0.5 62.49 35 6.7 Yes 21 -2.79 No 0 0 No -34 0.58 No 46 53.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94205115 - NM_005591 MRE11 0 . . . 5.32 64.77 25 5.1 No 32 1.44 Yes 0 0 No -24 0.8 Yes 26 92.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89708221 + NM_000314 PTEN 0 . . . 4.98 71.04 20 4.58 No 54 0.49 No 0 0 No -19 0.46 No 46 68.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68392851 + NM_133509 RAD51B 0 . . . 6.35 79.92 23 4.92 No 25 1.26 Yes 0 0 No -22 0.46 No 33 67.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32939186 + NM_000059 BRCA2 0 . . . 3.21 80.76 33 5.47 No -2 0.38 No 0 0 No -31 0.59 No 49 66.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68978039 + NM_133509 RAD51B 0 . . . 6.04 77.7 17 5.29 No 57 0.1 No 0 0 No -21 0.6 No 48 75.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68792370 + NM_004360 CDH1 0 . . . 3.25 66.77 26 4.8 No 30 0.07 No 0 0 No -25 0.34 No 28 90.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89717055 + NM_000314 PTEN 0 . . . 7.98 75.92 19 5.03 No 52 0.77 No 0 0 No -26 0.78 Yes 31 88.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23636949 - NM_024675 PALB2 0 . . . 4.02 80.12 34 5.66 Yes 9 1.23 Yes 0 0 No -33 0.7 Yes 49 88.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94217550 - NM_005591 MRE11 0 . . . 7.61 78.69 22 5.29 No 8 0.31 No 0 0 No -58 0.52 No 49 74.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131979067 + NM_005732 RAD50 0 . . . 7.77 83.62 24 7.04 Yes 16 0.99 Yes 0 0 No -23 0.7 Yes 42 92.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32936774 + NM_000059 BRCA2 0 . . . 6.07 77.84 20 4.7 No 66 -4.24 No 0 0 No -20 0.83 Yes 45 73.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68855136 + NM_004360 CDH1 0 . . . 5.19 77.6 27 4.88 No 66 -3.63 No 0 0 No -21 0.73 Yes 45 95.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68544656 + NM_133509 RAD51B 0 . . . 2.44 69.48 25 5.2 No 70 -3.08 No 0 0 No -24 0.94 Yes 43 54.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59932129 - NM_032043 BRIP1 0 . . . 4.09 62.88 31 5.66 Yes 49 0.65 No 0 0 No -25 0.82 Yes 24 75.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89627570 + NM_000314 PTEN 0 . . . 4.53 69.49 15 4.58 No 10 1.2 Yes 0 0 No -21 0.41 No 48 82.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190719080 + NM_000534 PMS1 0 . . . 2.17 66.04 28 5.24 No 1 1.35 Yes 0 0 No -30 0.81 Yes 52 68.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68461501 + NM_133509 RAD51B 0 . . . 3.66 68.54 20 6.53 Yes 24 1.08 Yes 0 0 No -22 0.68 Yes 29 51.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47684541 + NM_000251 MSH2 0 . . . 0.39 71.45 16 5.1 No 3 0.58 No 0 0 No -20 0.88 Yes 15 55.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37043552 + NM_000249 MLH1 0 . . . 4.36 71.98 19 4.79 No 16 0.99 Yes 0 0 No -28 0.43 No 42 89.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33447172 - NM_002878 RAD51D 0 . . . 8.32 82.83 37 5.9 Yes 38 0.55 No 0 0 No -36 0.58 No 44 85.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94201717 - NM_005591 MRE11 0 . . . 0.54 68.66 20 5.66 Yes 29 -2.43 No 0 0 No -23 0.38 No 42 57.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68860082 + NM_133509 RAD51B 0 . . . 5.97 74.24 14 5.99 Yes 68 0.95 Yes 0 0 No -33 0.48 No 47 73.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68786175 + NM_004360 CDH1 0 . . . 0.9 73.16 21 5.1 No 70 0.81 Yes 0 0 No -27 0.68 Yes 46 42.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68627097 + NM_133509 RAD51B 0 . . . 4.12 0 13 4.83 No 10 0.65 No 0 0 No -17 0.61 No 48 48.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68350410 + NM_133509 RAD51B 0 . . . 9.64 90.52 15 5.12 No 12 1.43 Yes 0 0 No -30 0.51 No 46 89.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68667783 + NM_133509 RAD51B 0 . . . 0.22 76.68 22 6.85 Yes 3 1.3 Yes 0 0 No -21 0.96 Yes 48 56.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32916160 + NM_000059 BRCA2 0 . . . 0.32 74.68 27 4.07 No 35 1.07 Yes 0 0 No -27 0.39 No 54 79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68938538 + NM_133509 RAD51B 0 . . . 8.05 89.1 16 4.69 No 23 1.39 Yes 0 0 No -7 0.22 No 37 61.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215641127 - NM_000465 BARD1 0 . . . 0.02 67.68 13 4.36 No 75 -5.61 No 0 0 No -58 0.86 Yes 45 52.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190666922 + NM_000534 PMS1 0 . . . 1.44 67.51 22 5.88 Yes 75 0.73 No 0 0 No -21 0.66 Yes 46 47.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152364488 - NM_005431 XRCC2 0 . . . 3.97 84.41 10 5.2 No 24 1.35 Yes 0 0 No -20 0.42 No 33 52.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47704571 + NM_000251 MSH2 0 . . . 1.98 67.33 25 7.24 Yes -3 0.01 No 0 0 No -24 0.7 Yes 58 33.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68406736 + NM_133509 RAD51B 0 . . . 2.68 65.46 18 4.88 No -1 0.3 No 0 0 No -50 0.79 Yes 44 43.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6037647 - NM_000535 PMS2 0 . . . 8.26 94.73 19 4.36 No 13 1.1 Yes 0 0 No -39 0.58 No 45 77.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68821457 + NM_004360 CDH1 0 . . . 1.9 81.83 30 5.91 Yes 35 0.89 Yes 0 0 No -29 0.86 Yes 15 55.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68827456 + NM_004360 CDH1 0 . . . 6.01 73.7 26 4.08 No 63 -4.1 No 0 0 No -25 0.47 No 51 89.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84399818 - NM_139076 FAM175A 0 . . . 3.25 76.54 15 5.1 No 46 1.12 Yes 0 0 No -21 0.43 No 46 77.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69112121 + NM_133509 RAD51B 0 . . . 4.65 82.37 10 4.58 No 8 0.56 No 0 0 No -21 0.31 No 39 54.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105194663 + NM_021930 RINT1 0 . . . 5.02 85.02 22 4.18 No 76 1.7 Yes 0 0 No -21 0.65 No 34 54.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41008100 + NM_001164269 RAD51 0 . . . 3.97 75.18 31 5.97 Yes 7 0.97 Yes 0 0 No -30 0.88 Yes 51 75.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41216634 - NM_007294 BRCA1 0 . . . 3.37 78.66 26 5.96 Yes 63 -2.47 No 0 0 No -25 0.79 Yes 48 64.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75518471 - NM_001040108 MLH3 0 . . . 4.33 75.21 24 6.22 Yes 8 0.26 No 0 0 No -23 0.87 Yes 38 37.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94154670 - NM_005591 MRE11 0 . . . 2.82 67.67 42 7.75 Yes 62 0.09 No 0 0 No -41 0.84 Yes 49 77.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59803314 - NM_032043 BRIP1 0 . . . 1.45 62.35 31 6.34 Yes 27 0.7 No 0 0 No -30 0.82 Yes 39 45.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68986287 + NM_133509 RAD51B 0 . . . 0.77 80.06 80 9.21 Yes 24 -2.55 No 0 0 No -33 0.92 Yes 47 41.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89627115 + NM_000314 PTEN 0 . . . 7.39 80.37 16 5.48 No 63 -2.94 No 0 0 No -28 0.44 No 39 47.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68474121 + NM_133509 RAD51B 0 . . . 0.99 69.31 17 5.92 Yes 25 1.16 Yes 0 0 No -21 0.78 Yes 11 25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56800829 + NM_058216 RAD51C 0 . . . 4.68 72.85 34 7.62 Yes 39 0.78 Yes 0 0 No -28 0.75 Yes 46 76.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6045311 - NM_000535 PMS2 0 . . . 3.83 0 15 5.2 No 24 1.03 Yes 0 0 No -47 0.55 No 34 77.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47693033 + NM_000251 MSH2 0 . . . 6.24 81.62 24 4.77 No 37 0.91 Yes 0 0 No -23 0.48 No 52 69.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131891599 + NM_005732 RAD50 0 . . . 0.16 75.5 42 5.09 No 72 0.6 No 0 0 No -35 0.34 No 42 69.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152365817 - NM_005431 XRCC2 0 . . . 2.24 58.7 22 5.29 No 72 -5.41 No 0 0 No -21 0.71 Yes 44 63.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90947928 - NM_002485 NBN 0 . . . 2.78 72.56 9 4.57 No 30 0.54 No 0 0 No -55 0.31 No 48 77.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68469727 + NM_133509 RAD51B 0 . . . 3.35 85.93 25 6.23 Yes 36 1.31 Yes 0 0 No -24 0.8 Yes 49 92.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68534963 + NM_133509 RAD51B 0 . . . 1.45 65.24 15 5.65 Yes 18 0.57 No 0 0 No -25 0.52 No 40 93.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68812069 + NM_004360 CDH1 0 . . . 1.88 76.85 35 5.46 No 38 0.14 No 0 0 No -22 0.6 No 51 41.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89637422 + NM_000314 PTEN 0 . . . 0.87 65.55 14 5.38 No 41 0.52 No 0 0 No -22 0.45 No 38 68.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799999 + NM_058216 RAD51C 0 . . . 0.92 0 50 6.63 Yes 43 0.7 No 0 0 No -34 0.66 No 40 75.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94183528 - NM_005591 MRE11 0 . . . 6.39 82.15 15 5.73 Yes 14 0.18 No 0 0 No -26 0.73 Yes 44 56.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68865994 + NM_133509 RAD51B 0 . . . 4.3 84.41 23 5.2 No 19 1.35 Yes 0 0 No -22 0.94 Yes 39 84.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104168306 - NM_001100119 XRCC3 0 . . . 3.84 86.86 26 5.17 No 23 0.9 Yes 0 0 No -25 0.72 Yes 48 61.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105208071 + NM_021930 RINT1 0 . . . 3.65 72.57 29 5.48 No 18 0.93 Yes 0 0 No -24 0.75 Yes 40 51.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41260411 - NM_007294 BRCA1 0 . . . 2.67 63.17 22 5.29 No 76 0.73 No 0 0 No -22 0.29 No 46 57.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108180550 + NM_000051 ATM 0 . . . 4.56 70 27 6.15 Yes 36 1.19 Yes 0 0 No -26 0.88 Yes 31 56.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68799886 + NM_004360 CDH1 0 . . . 3.96 84.61 91 8.1 Yes 21 0.33 No 0 0 No -24 0.47 No 37 68.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94157124 - NM_005591 MRE11 0 . . . 4.66 79.94 30 5.89 Yes 66 0.41 No 0 0 No -29 0.6 No 50 55.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68835109 + NM_133509 RAD51B 0 . . . 2.85 84.01 42 4.83 No 3 1.44 Yes 0 0 No -27 0.85 Yes 49 47.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131966120 + NM_005732 RAD50 0 . . . 1.35 0 20 4.75 No 39 0.77 No 0 0 No -27 0.85 Yes 48 36.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68753847 + NM_133509 RAD51B 0 . . . 9.07 83.18 31 6.08 Yes 17 1.64 Yes 0 0 No -30 0.55 No 41 72.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89634656 + NM_000314 PTEN 0 . . . 2.42 63.72 30 5.74 Yes 70 0.81 Yes 0 0 No -29 0.63 No 46 91.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89638040 + NM_000314 PTEN 0 . . . 2.2 72.26 18 4.9 No 30 1.19 Yes 0 0 No -50 0.53 No 28 69.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56800108 + NM_058216 RAD51C 0 . . . 5.76 67.8 18 4.9 No 10 0.78 Yes 0 0 No -22 0.43 No 48 59.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47719709 + NM_000251 MSH2 0 . . . 1.22 62.45 27 5.57 Yes 31 1.63 Yes 0 0 No -26 0.96 Yes 27 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59767843 - NM_032043 BRIP1 0 . . . 2.53 71.98 26 4.97 No 73 0.83 Yes 0 0 No -25 0.72 Yes 48 62.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68948138 + NM_133509 RAD51B 0 . . . 3.64 79.9 20 5.57 Yes -4 0.59 No 0 0 No -19 0.7 Yes 48 85.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47799636 + NM_000251 MSH2 0 . . . 3.05 0 64 6.75 Yes 76 -2.41 No 0 0 No -25 0.56 No 51 41.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108177072 + NM_000051 ATM 0 . . . 1.81 64.56 27 5.39 No 29 -2.94 No 0 0 No -26 0.62 No 52 32.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89655266 + NM_000314 PTEN 0 . . . 0.38 0 14 5.31 No 55 0.7 No 0 0 No -20 0.89 Yes 46 65.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68524120 + NM_133509 RAD51B 0 . . . 5.47 78.83 12 5.39 No 8 0.3 No 0 0 No -28 0.29 No 46 40.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69133187 + NM_133509 RAD51B 0 . . . 1.11 81.19 15 4.39 No 58 -1.78 No 0 0 No -22 0.41 No 50 66.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108221302 + NM_000051 ATM 0 . . . 8.53 83.82 19 4.76 No 54 -5.23 No 0 0 No -24 0.73 Yes 45 95.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94198315 - NM_005591 MRE11 0 . . . 0.65 62.55 35 5.17 No 61 0 No 0 0 No -29 0.42 No 38 39.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68608670 + NM_133509 RAD51B 0 . . . 1.52 76.96 28 5.2 No 76 0.05 No 0 0 No -20 0.51 No 52 44.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75487080 - NM_001040108 MLH3 0 . . . 4.79 86.04 20 5.65 Yes 49 1.22 Yes 0 0 No -26 0.69 Yes 52 51.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32896593 + NM_000059 BRCA2 0 . . . 0.11 0 27 4.69 No 6 0.89 Yes 0 0 No -27 0.71 Yes 52 90.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33445318 - NM_002878 RAD51D 0 . . . 4.06 78.2 17 4.8 No 47 0.71 No 0 0 No -25 0.66 Yes 46 94.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47774814 + NM_000251 MSH2 0 . . . 6 81.45 21 5.38 No 35 0.91 Yes 0 0 No -20 0.82 Yes 47 67.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131941323 + NM_005732 RAD50 0 . . . 1.25 75.18 20 4.68 No 4 0.55 No 0 0 No -19 0.76 Yes 48 69.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33428220 - NM_002878 RAD51D 0 . . . 9.46 85.83 18 4.9 No 31 -3.39 No 0 0 No -17 0.81 Yes 40 74.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68751103 + NM_133509 RAD51B 0 . . . 2.91 85.9 15 5.73 Yes 25 0.3 No 0 0 No -26 0.37 No 33 54.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68682576 + NM_133509 RAD51B 0 . . . 3.86 77.36 22 5.1 No 59 0.75 No 0 0 No -21 0.83 Yes 44 83.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59801949 - NM_032043 BRIP1 0 . . . 1.64 71.43 28 4.65 No 76 0.73 No 0 0 No -27 0.78 Yes 45 25.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90973613 - NM_002485 NBN 0 . . . 6.74 81.06 32 7.01 Yes 14 0.88 Yes 0 0 No -31 0.93 Yes 44 88.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68544766 + NM_133509 RAD51B 0 . . . 0.29 0 24 5.21 No 48 -3.93 No 0 0 No -30 0.45 No 52 62.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68856929 + NM_133509 RAD51B 0 . . . 1.88 69.37 63 10.47 Yes 44 1.31 Yes 0 0 No -33 0.86 Yes 39 92.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68521452 + NM_133509 RAD51B 0 . . . 0.8 68.37 30 4.46 No 68 0.42 No 0 0 No -29 0.49 No 44 47.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108096464 + NM_000051 ATM 0 . . . 6.46 81.31 27 6.34 Yes 19 1.51 Yes 0 0 No -26 0.64 No 39 63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94160381 - NM_005591 MRE11 0 . . . 2.92 75.63 16 4.63 No 53 0.59 No 0 0 No -15 0.46 No 32 55.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89653298 + NM_000314 PTEN 0 . . . 4.89 74.08 26 7.28 Yes 15 0.97 Yes 0 0 No -25 0.73 Yes 43 74.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190706458 + NM_000534 PMS1 0 . . . 2.38 0 50 6.69 Yes -3 -1.77 No 0 0 No -40 0.48 No 19 58.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69009573 + NM_133509 RAD51B 0 . . . 5.28 72.53 101 10.34 Yes 19 0.73 No 0 0 No -29 0.22 No 43 96.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47786746 + NM_000251 MSH2 0 . . . 3.91 73.35 32 5.82 Yes 70 0.69 No 0 0 No -31 0.76 Yes 45 52.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131969538 + NM_005732 RAD50 0 . . . 2.85 64.11 12 5.29 No 25 0.49 No 0 0 No -23 0.49 No 51 55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68467726 + NM_133509 RAD51B 0 . . . 10.56 88.06 33 5.99 Yes 28 0.67 No 0 0 No -23 0.55 No 43 88.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56783073 + NM_058216 RAD51C 0 . . . 5 75.67 41 7.58 Yes 72 1.8 Yes 0 0 No -35 0.5 No 44 85.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104171326 - NM_001100119 XRCC3 0 . . . 2.93 72.01 21 5.88 Yes -4 0.38 No 0 0 No -21 0.62 No 44 25.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68587007 + NM_133509 RAD51B 0 . . . 4.77 66.17 31 7.21 Yes 34 0.14 No 0 0 No -30 0.85 Yes 24 50.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215663998 - NM_000465 BARD1 0 . . . 3.92 84.17 31 4.4 No 53 0.45 No 0 0 No -23 0.56 No 19 49.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69110012 + NM_133509 RAD51B 0 . . . 3.47 75.98 15 5.39 No 9 1.11 Yes 0 0 No -28 0.29 No 42 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47675137 + NM_000251 MSH2 0 . . . 2.32 83.37 26 5.2 No 33 1.02 Yes 0 0 No -25 0.66 No 48 38.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59865440 - NM_032043 BRIP1 0 . . . 7.85 79.63 32 5.74 Yes 48 1.42 Yes 0 0 No -32 0.45 No 43 86.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23629180 - NM_024675 PALB2 0 . . . 2.11 0 10 5.48 No 69 -0.12 No 0 0 No -25 0.43 No 44 49.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41229797 - NM_007294 BRCA1 0 . . . 4.64 80.22 18 4.32 No 60 -4.02 No 0 0 No -17 0.85 Yes 43 74.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68517111 + NM_133509 RAD51B 0 . . . 1.67 68.88 24 5.29 No 57 0.77 Yes 0 0 No -23 0.68 Yes 35 76.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90959773 - NM_002485 NBN 0 . . . 2.86 68.95 19 4.79 No 16 1.39 Yes 0 0 No -26 0.48 No 47 42.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56772468 + NM_058216 RAD51C 0 . . . 1.05 0 22 5.19 No 7 0.81 Yes 21 0.65 Yes -21 0.62 No 45 88.77 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 68725305 + NM_133509 RAD51B 0 . . . 1.14 53.05 11 4.8 No 34 0.58 No 0 0 No -16 0.56 No 24 72.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59905835 - NM_032043 BRIP1 0 . . . 3.89 69.07 17 4.58 No 63 0.35 No 0 0 No -46 0.71 Yes 44 67.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68434571 + NM_133509 RAD51B 0 . . . 0.92 0 38 6.21 Yes 69 -1.87 No 0 0 No -30 0.42 No 37 55.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41278132 - NM_007294 BRCA1 0 . . . 11.53 86.45 17 6.47 Yes 3 1.6 Yes 0 0 No -20 0.67 Yes 55 56.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68364776 + NM_133509 RAD51B 0 . . . 1.77 71.55 16 4.21 No 17 -2.9 No 0 0 No -46 0.57 No 42 28.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215635444 - NM_000465 BARD1 0 . . . 5.41 80.04 14 4.99 No -4 -0.04 No 0 0 No -25 0.55 No 48 57.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152348480 - NM_005431 XRCC2 0 . . . 1.78 77.31 14 5 No 60 0.9 Yes 0 0 No -26 0.67 Yes 10 50.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41272807 - NM_007294 BRCA1 0 . . . 2.18 64.21 24 4.46 No 52 0.97 Yes 0 0 No -23 0.96 Yes 49 34.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69028866 + NM_133509 RAD51B 0 . . . 0.31 64.2 13 4.73 No 58 0.85 Yes 0 0 No -17 0.65 No 42 41.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68467852 + NM_133509 RAD51B 0 . . . 5.74 71.03 25 5.66 Yes 46 0.42 No 0 0 No -27 0.81 Yes 33 58.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69102868 + NM_133509 RAD51B 0 . . . 3.58 80.24 17 5.19 No 55 -4.19 No 0 0 No -24 0.47 No 44 87.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41017493 + NM_001164269 RAD51 0 . . . 3.24 68.34 11 4.9 No 13 0.96 Yes 0 0 No -35 0.88 Yes 45 85.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68921474 + NM_133509 RAD51B 0 . . . 1.44 73.3 23 4.81 No 68 0.39 No 0 0 No -29 0.56 No 48 67.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68899775 + NM_133509 RAD51B 0 . . . 5.42 82.33 12 4.69 No 67 0.65 No 0 0 No -18 0.56 No 40 40.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21969975 - NM_000077 CDKN2A 0 . . . 5.92 86.04 48 7 Yes 70 -3.77 No 0 0 No -47 0.67 Yes 44 58.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59773969 - NM_032043 BRIP1 0 . . . 5.72 88.68 27 5.37 No 52 1.47 Yes 0 0 No -23 0.43 No 49 89.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108117140 + NM_000051 ATM 0 . . . 1.75 69.99 51 7.13 Yes 76 -6.6 No 0 0 No -30 0.58 No 45 81.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68616872 + NM_133509 RAD51B 0 . . . 0.11 74.73 17 4.8 No 33 0.98 Yes 0 0 No -59 0.24 No 39 59.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59865617 - NM_032043 BRIP1 0 . . . 2.06 70.94 13 5.09 No 39 0.3 No 0 0 No -24 0.52 No 62 39.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59837541 - NM_032043 BRIP1 0 . . . 5.9 88.03 19 5.47 No 25 0.59 No 0 0 No -18 0.53 No 33 56.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69067663 + NM_133509 RAD51B 0 . . . 8.11 88.49 29 7.51 Yes 23 0.16 No 0 0 No -28 0.83 Yes 49 78.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89671387 + NM_000314 PTEN 0 . . . 7.65 84.31 25 4.82 No 47 1.49 Yes 0 0 No -24 0.88 Yes 49 93.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89699952 + NM_000314 PTEN 0 . . . 2.62 79.17 34 5.17 No 4 1.06 Yes 0 0 No -28 0.81 Yes 54 82.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68358676 + NM_133509 RAD51B 0 . . . 3.62 68.28 19 4.69 No 31 0.44 No 0 0 No -18 0.64 No 44 52.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89682190 + NM_000314 PTEN 0 . . . 10.12 94.18 20 5.1 No 6 0.4 No 0 0 No -19 0.7 Yes 43 56.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215620122 - NM_000465 BARD1 0 . . . 1.18 66.49 27 5.1 No 48 1.11 Yes 0 0 No -26 0.43 No 53 36.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152362536 - NM_005431 XRCC2 0 . . . 3.33 86.93 23 4.9 No 3 0.23 No 0 0 No -23 0.5 No 43 96.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68669706 + NM_133509 RAD51B 0 . . . 6.23 83.32 22 5.29 No 24 1.72 Yes 0 0 No -21 0.6 No 34 72.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68436354 + NM_133509 RAD51B 0 . . . 5.16 88.75 19 4.8 No 0 0.53 No 0 0 No -18 0.23 No 43 67.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674283 + NM_000251 MSH2 0 . . . 5.1 73.09 28 4.86 No 68 0.49 No 0 0 No -25 0.8 Yes 42 91.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69128477 + NM_133509 RAD51B 0 . . . 5.85 85.07 21 4.48 No 75 -1.9 No 0 0 No -20 0.46 No 52 56.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190686658 + NM_000534 PMS1 0 . . . 4.35 71.38 17 4.8 No 27 0.63 No 0 0 No -26 0.47 No 42 90.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131901133 + NM_005732 RAD50 0 . . . 5.03 77.32 16 5.07 No 8 1.97 Yes 0 0 No -22 0.49 No 50 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215676284 - NM_000465 BARD1 0 . . . 2.71 70.72 20 3.82 No 2 1.34 Yes 0 0 No -22 0.94 Yes 37 49.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47746244 + NM_000251 MSH2 0 . . . 6.73 82.72 21 5.65 Yes 5 2.07 Yes 0 0 No -24 0.7 Yes 46 58.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69115719 + NM_133509 RAD51B 0 . . . 6.71 82.41 91 8.98 Yes 60 -5.76 No 0 0 No -22 0.57 No 43 72.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68976566 + NM_133509 RAD51B 0 . . . 5.31 76.89 17 4.58 No 6 -2.62 No 0 0 No -46 0.38 No 56 47.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68778928 + NM_004360 CDH1 0 . . . 6.77 85.59 20 4.9 No 42 0.81 Yes 0 0 No -20 0.49 No 44 48.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94148479 - NM_005591 MRE11 0 . . . 2.28 77.74 40 6.63 Yes 65 0.3 No 0 0 No -36 0.47 No 48 39.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41196489 - NM_007294 BRCA1 0 . . . 3.35 84.28 23 5.19 No 53 0.69 No 0 0 No -22 0.82 Yes 47 89.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68575944 + NM_133509 RAD51B 0 . . . 3.21 79.74 16 4.69 No 17 0.29 No 0 0 No -21 0.49 No 14 48.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131918396 + NM_005732 RAD50 0 . . . 2.29 70.05 19 4.36 No 10 1.92 Yes 0 0 No -19 0.63 No 48 79.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48032075 + NM_000179 MSH6 0 . . . 0.78 72.03 22 4.58 No -3 0.35 No 0 0 No -21 0.56 No 16 39.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131919430 + NM_005732 RAD50 0 . . . 6.3 90.92 29 5.87 Yes 45 1.46 Yes 0 0 No -28 0.9 Yes 17 89.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69026350 + NM_133509 RAD51B 0 . . . 1.34 78.4 42 6.56 Yes 13 1.51 Yes 0 0 No -41 0.54 No 50 69.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41198671 - NM_007294 BRCA1 0 . . . 2.42 84.22 22 5.13 No 33 1.13 Yes 0 0 No -21 0.56 No 51 41.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33438261 - NM_002878 RAD51D 0 . . . 0.32 73.37 20 4.47 No 44 1.42 Yes 0 0 No -19 0.53 No 14 36.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56788163 + NM_058216 RAD51C 0 . . . 3.56 82.63 32 6.56 Yes 76 -4.44 No 0 0 No -31 0.75 Yes 49 50.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68748743 + NM_133509 RAD51B 0 . . . 6.79 83.55 16 5.73 Yes 60 0.85 Yes 0 0 No -24 0.66 No 15 51.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32917751 + NM_000059 BRCA2 0 . . . 0.63 71.88 22 5.29 No 38 0.24 No 0 0 No -21 0.47 No 52 57.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94164436 - NM_005591 MRE11 0 . . . 3.86 68.26 21 5.1 No 10 1.64 Yes 0 0 No -20 0.53 No 48 81.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68809231 + NM_133509 RAD51B 0 . . . 2.3 74.3 32 6.76 Yes 65 -2.1 No 0 0 No -32 0.67 Yes 64 32.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108173991 + NM_000051 ATM 0 . . . 1.72 65.22 12 3.73 No 6 0.49 No 0 0 No -22 0.52 No 36 39.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47642671 + NM_000251 MSH2 0 . . . 0.2 66.64 13 4.36 No 71 1.36 Yes 0 0 No -59 0.43 No 54 54.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21988385 - NM_000077 CDKN2A 0 . . . 1.63 79.53 22 7.28 Yes 66 0.67 No 0 0 No -21 0.88 Yes 53 33.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131914866 + NM_005732 RAD50 0 . . . 1.62 75.7 35 5.83 Yes 55 1.25 Yes 0 0 No -27 0.8 Yes 47 50.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68561053 + NM_133509 RAD51B 0 . . . 2.87 80.33 19 4.69 No 61 2.16 Yes 0 0 No -18 0.94 Yes 42 91.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68672719 + NM_133509 RAD51B 0 . . . 6.46 91.44 32 6.52 Yes 65 1.26 Yes 0 0 No -34 0.66 Yes 50 76.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23642969 - NM_024675 PALB2 0 . . . 2.15 75.44 25 5.88 Yes 34 -3.35 No 0 0 No -24 0.69 Yes 43 19.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68705538 + NM_133509 RAD51B 0 . . . 5.26 83.88 34 7.51 Yes 15 0.3 No 0 0 No -33 0.59 No 43 64.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21977402 - NM_000077 CDKN2A 0 . . . 4.54 85.64 34 6.61 Yes 67 -3.25 No 0 0 No -37 0.61 No 45 46.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215641585 - NM_000465 BARD1 0 . . . 6.67 78.61 52 7.65 Yes 74 1.36 Yes 0 0 No -27 0.51 No 48 83.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68668152 + NM_133509 RAD51B 0 . . . 3.66 75.58 17 4.69 No -4 0.59 No 0 0 No -17 0.32 No 40 86.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59928309 - NM_032043 BRIP1 0 . . . 1.38 69.16 18 6.48 Yes 47 0.8 Yes 0 0 No -34 0.49 No 48 37.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40999448 + NM_001164269 RAD51 0 . . . 2.16 81.72 19 5 No 13 0.84 Yes 0 0 No -23 0.33 No 50 64.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59875909 - NM_032043 BRIP1 0 . . . 7.9 81.92 34 6.03 Yes 10 1.29 Yes 0 0 No -30 0.43 No 48 57.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47703830 + NM_000251 MSH2 0 . . . 0.64 0 29 3.87 No 12 0.18 No 0 0 No -24 0.38 No 46 51.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69045780 + NM_133509 RAD51B 0 . . . 1.41 75.87 15 2.83 No 32 -2.85 No 0 0 No -24 0.77 Yes 45 26.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68452848 + NM_133509 RAD51B 0 . . . 6.83 75.85 35 8.5 Yes 8 0.42 No 0 0 No -34 0.93 Yes 44 53.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190723077 + NM_000534 PMS1 0 . . . 2.32 60.47 34 7.56 Yes 62 0.52 No 0 0 No -33 0.38 No 42 53.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104181115 - NM_001100119 XRCC3 0 . . . 2.05 80.96 53 8.24 Yes 12 0.08 No 0 0 No -21 0.56 No 46 54.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68968719 + NM_133509 RAD51B 0 . . . 2.34 82.75 25 6.23 Yes 33 1.15 Yes 0 0 No -25 0.6 No 25 94.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94156614 - NM_005591 MRE11 0 . . . 6.99 84.51 18 4.66 No 32 -1.93 No 0 0 No -44 0.65 No 50 53.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68410077 + NM_133509 RAD51B 0 . . . 3.9 64.77 11 4.8 No 33 1.39 Yes 0 0 No -57 0.76 Yes 25 70.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69030587 + NM_133509 RAD51B 0 . . . 0.2 61.57 15 3.93 No 52 0.42 No 0 0 No -28 0.64 No 45 55.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94160578 - NM_005591 MRE11 0 . . . 3.96 70.22 35 5.45 No 64 0.47 No 0 0 No -28 0.71 Yes 44 86.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68525783 + NM_133509 RAD51B 0 . . . 3.2 70.35 23 5 No 22 1.93 Yes 0 0 No -45 0.44 No 36 94.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41241263 - NM_007294 BRCA1 0 . . . 1.14 0 38 5.33 No 9 1.08 Yes 0 0 No -23 0.79 Yes 49 69.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89727947 + NM_000314 PTEN 0 . . . 5.38 76.08 16 4.84 No 68 -3.4 No 0 0 No -45 0.77 Yes 45 80.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32937725 + NM_000059 BRCA2 0 . . . 1.23 0 17 4.79 No 35 0.39 No 0 0 No -57 0.38 No 53 70.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94160490 - NM_005591 MRE11 0 . . . 3.03 69.86 28 5.17 No 28 0.06 No 0 0 No -26 0.51 No 42 87.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69040170 + NM_133509 RAD51B 0 . . . 4.86 83.83 34 6.71 Yes 20 1.45 Yes 0 0 No -33 0.65 No 38 87.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41022850 + NM_001164269 RAD51 0 . . . 1.4 0 26 5.63 Yes 45 1.03 Yes 0 0 No -26 0.64 No 38 70.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21983708 - NM_000077 CDKN2A 0 . . . 0.39 73.93 36 6.08 Yes -2 0.69 No 0 0 No -24 0.7 Yes 60 48.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41202435 - NM_007294 BRCA1 0 . . . 2.2 72.26 27 5.2 No 35 1.39 Yes 0 0 No -57 0.83 Yes 23 91.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59927864 - NM_032043 BRIP1 0 . . . 5.78 77.43 49 4.85 No 29 0.49 No 0 0 No -21 0.86 Yes 51 53.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68787325 + NM_133509 RAD51B 0 . . . 3.7 78.37 20 7.14 Yes 58 0.52 No 0 0 No -19 0.84 Yes 21 38.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68859838 + NM_004360 CDH1 0 . . . 2.89 82.49 29 6.53 Yes 8 0.4 No 0 0 No -28 0.84 Yes 50 88.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47722144 + NM_000251 MSH2 0 . . . 4.17 80.21 26 5.39 No 56 -3.08 No 0 0 No -25 0.4 No 50 42.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68868918 + NM_004360 CDH1 0 . . . 3.66 73.77 33 7.28 Yes 16 0.95 Yes 0 0 No -35 0.54 No 42 93.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68326723 + NM_133509 RAD51B 0 . . . 3.25 80.12 22 4.89 No 8 1.2 Yes 0 0 No -35 0.61 No 50 88.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215620866 - NM_000465 BARD1 0 . . . 4.54 88.43 18 6.21 Yes 0 0.62 No 0 0 No -32 0.48 No 50 66.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59919363 - NM_032043 BRIP1 0 . . . 4.7 70.19 26 5.28 No 16 1.08 Yes 0 0 No -20 0.38 No 42 88.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37037269 + NM_000249 MLH1 0 . . . 4.88 82.82 47 7.73 Yes 52 0.95 Yes 0 0 No -23 0.72 Yes 48 74.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94211623 - NM_005591 MRE11 0 . . . 0.91 67.47 89 9.14 Yes 61 -5.83 No 0 0 No -21 0.28 No 38 43.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41278970 - NM_007294 BRCA1 0 . . . 3.02 61.43 16 4.03 No 68 -2.74 No 0 0 No -21 0.72 Yes 49 85.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6014134 - NM_000535 PMS2 0 . . . 2.06 73.51 12 5 No 72 0.78 Yes 0 0 No -52 0.28 No 51 22.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47703302 + NM_000251 MSH2 0 . . . 3.17 75.12 13 4.26 No 31 0.2 No 0 0 No -32 0.26 No 14 46.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41241867 - NM_007294 BRCA1 0 . . . 3.02 0 25 7.63 Yes -3 0.94 Yes 0 0 No -25 0.62 No 48 72.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68850051 + NM_133509 RAD51B 0 . . . 4.31 70.8 29 6.31 Yes 33 0.49 No 0 0 No -28 0.75 Yes 25 78.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47668519 + NM_000251 MSH2 0 . . . 4.24 81.41 20 5.09 No 53 0.15 No 0 0 No -22 0.55 No 14 45.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47785157 + NM_000251 MSH2 0 . . . 0.05 76.31 21 5.2 No 66 -2.08 No 0 0 No -21 0.6 No 51 42.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68793833 + NM_004360 CDH1 0 . . . 8.02 84.41 13 4.27 No 22 1.08 Yes 0 0 No -22 0.53 No 52 67.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68634863 + NM_133509 RAD51B 0 . . . 3.07 72.63 36 5.42 No 58 0.62 No 0 0 No -28 0.4 No 58 56.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68644774 + NM_133509 RAD51B 0 . . . 9.42 89.48 17 5.26 No 14 1.43 Yes 0 0 No -23 0.44 No 44 81.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68916835 + NM_133509 RAD51B 0 . . . 7.25 86.81 28 4.57 No 35 0 No 0 0 No -28 0.42 No 47 51.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68525186 + NM_133509 RAD51B 0 . . . 1.01 0 16 4.97 No 36 1.41 Yes 0 0 No -29 0.7 Yes 39 52.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68544366 + NM_133509 RAD51B 0 . . . 2.74 85.22 26 5.19 No 8 0.03 No 0 0 No -25 0.86 Yes 45 49.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59891766 - NM_032043 BRIP1 0 . . . 4.67 73.69 23 5.21 No 34 0.78 Yes 0 0 No -23 0.45 No 24 70.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59920831 - NM_032043 BRIP1 0 . . . 2.18 72.78 30 4.22 No 41 0.16 No 0 0 No -26 0.74 Yes 48 58.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68826797 + NM_004360 CDH1 0 . . . 8.75 91.84 16 5.2 No 66 0.85 Yes 0 0 No -22 0.75 Yes 40 71.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47697284 + NM_000251 MSH2 0 . . . 1.86 0 24 5.73 Yes 45 1.22 Yes 0 0 No -27 0.86 Yes 38 43.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69083584 + NM_133509 RAD51B 0 . . . 10.94 84.83 42 6.66 Yes 62 0.25 No 0 0 No -17 0.41 No 48 75.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68833464 + NM_004360 CDH1 0 . . . 0 0 27 4.53 No 63 1.45 Yes 0 0 No -42 0.32 No 37 59.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108170234 + NM_000051 ATM 0 . . . 1.47 74.73 20 8 Yes 32 1.13 Yes 0 0 No -23 0.55 No 42 49.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32963036 + NM_000059 BRCA2 0 . . . 3.31 70.94 26 5.37 No 51 0.33 No 0 0 No -25 0.91 Yes 41 57.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68406553 + NM_133509 RAD51B 0 . . . 3.06 60.75 14 5.99 Yes 38 1.18 Yes 0 0 No -19 0.51 No 47 74.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47642763 + NM_000251 MSH2 0 . . . 2.7 80.12 28 5.29 No 7 1.04 Yes 0 0 No -59 0.5 No 51 81.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90989526 - NM_002485 NBN 0 . . . 0.98 73 24 4.89 No -3 0.65 No 0 0 No -23 0.57 No 46 48.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7569935 - NM_000546 TP53 0 . . . 3.63 80.22 27 5.47 No 75 0.83 Yes 0 0 No -26 0.76 Yes 43 45.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190735825 + NM_000534 PMS1 0 . . . 3.52 69.42 12 3.53 No 13 0.37 No 0 0 No -30 0.29 No 45 71.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32956990 + NM_000059 BRCA2 0 . . . 5.73 75.5 11 5.09 No 61 -5.15 No 0 0 No -42 0.33 No 48 51.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94214374 - NM_005591 MRE11 0 . . . 2.22 83.64 20 4.9 No 33 0.61 No 0 0 No -19 0.43 No 50 40.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59787059 - NM_032043 BRIP1 0 . . . 1.37 68.77 34 6.55 Yes 51 1.45 Yes 0 0 No -28 0.58 No 48 57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89650993 + NM_000314 PTEN 0 . . . 8.25 86.19 24 6.15 Yes 10 1.81 Yes 0 0 No -21 0.75 Yes 48 95.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68342083 + NM_133509 RAD51B 0 . . . 7.77 85.76 16 6.2 Yes 33 -2.45 No 0 0 No -24 0.46 No 45 87.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69092849 + NM_133509 RAD51B 0 . . . 0.24 69.07 28 5.38 No 50 -4.59 No 0 0 No -27 0.52 No 44 36.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29137701 - NM_001005735 CHEK2 0 . . . 2.13 67.67 19 5.48 No 49 0.29 No 0 0 No -23 0.67 Yes 21 74.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68970675 + NM_133509 RAD51B 0 . . . 2.78 75.49 35 5.73 Yes 58 -4.15 No 0 0 No -38 0.64 No 47 32.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47702125 + NM_000251 MSH2 0 . . . 6.39 86.72 15 4.36 No 25 0.39 No 25 0.5 Yes -22 0.93 Yes 44 56.98 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr9 21969449 - NM_000077 CDKN2A 0 . . . 5.34 0 27 6.4 Yes 62 0.59 No 0 0 No -26 0.87 Yes 54 50.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94168417 - NM_005591 MRE11 0 . . . 1.3 75.03 25 5 No 8 0.89 Yes 0 0 No -27 0.54 No 50 80.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69056865 + NM_133509 RAD51B 0 . . . 0.92 56.2 18 4.78 No 65 0.76 No 0 0 No -55 0.95 Yes 44 34.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68632437 + NM_133509 RAD51B 0 . . . 0.23 0 27 4.54 No 1 0.16 No 0 0 No -26 0.95 Yes 48 39.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68522123 + NM_133509 RAD51B 0 . . . 0.95 70.42 10 5.43 No 55 0.28 No 0 0 No -49 0.59 No 42 73.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152352816 - NM_005431 XRCC2 0 . . . 0.63 73.15 22 5.28 No 57 1.51 Yes 0 0 No -21 0.85 Yes 48 56.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68431400 + NM_133509 RAD51B 0 . . . 4.83 75.5 25 5.87 Yes 74 0.75 No 0 0 No -24 0.81 Yes 43 82.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94194847 - NM_005591 MRE11 0 . . . 6.31 81.13 25 5.84 Yes 68 0.9 Yes 0 0 No -24 0.51 No 42 67.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68478147 + NM_133509 RAD51B 0 . . . 3.78 65.53 20 4.31 No 69 1.64 Yes 0 0 No -23 0.79 Yes 29 88.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190653947 + NM_000534 PMS1 0 . . . 5.45 82.53 22 3.32 No 55 0.83 Yes 0 0 No -22 0.39 No 51 31.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68660053 + NM_133509 RAD51B 0 . . . 1.48 70.23 32 5.63 Yes 47 1.3 Yes 0 0 No -32 0.4 No 27 89.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215611973 - NM_000465 BARD1 0 . . . 3.06 0 22 5.29 No 45 -3.17 No 0 0 No -21 0.79 Yes 54 47.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47701085 + NM_000251 MSH2 0 . . . 3.18 69 10 4.43 No 42 0.82 Yes 0 0 No -21 0.54 No 41 74.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68435421 + NM_133509 RAD51B 0 . . . 1.46 77.57 36 7.19 Yes 55 1.25 Yes 0 0 No -30 0.47 No 51 70.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68917363 + NM_133509 RAD51B 0 . . . 5.39 91.08 17 6.82 Yes 8 0.97 Yes 0 0 No -40 0.64 No 50 97.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94200274 - NM_005591 MRE11 0 . . . 9.35 90.05 32 5.99 Yes 20 1.55 Yes 0 0 No -32 0.51 No 38 62.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190664307 + NM_000534 PMS1 0 . . . 4.6 68.62 18 4.9 No 54 -1.49 No 0 0 No -44 0.27 No 15 45.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59861416 - NM_032043 BRIP1 0 . . . 4.5 89.33 25 6.4 Yes 24 1.76 Yes 0 0 No -23 0.35 No 45 72.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68600004 + NM_133509 RAD51B 0 . . . 5.33 85.46 53 8.27 Yes 68 0.18 No 0 0 No -25 0.31 No 36 74.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68578248 + NM_133509 RAD51B 0 . . . 2.5 83.48 29 4.78 No 69 0.37 No 0 0 No -45 0.78 Yes 50 73.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47781619 + NM_000251 MSH2 0 . . . 3.63 74.68 18 5.38 No 54 1.05 Yes 0 0 No -17 0.34 No 50 67.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29124582 - NM_001005735 CHEK2 0 . . . 1.86 0 24 4.72 No 40 1.07 Yes 0 0 No -23 0.76 Yes 35 85.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68739584 + NM_133509 RAD51B 0 . . . 5.2 85.02 25 5.52 No 5 1.23 Yes 0 0 No -24 0.81 Yes 53 82.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29113414 - NM_001005735 CHEK2 0 . . . 6.29 77.57 22 4.11 No 31 0.23 No 0 0 No -40 0.73 Yes 45 60.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68756929 + NM_133509 RAD51B 0 . . . 1.26 0 19 4.24 No 6 2.03 Yes 0 0 No -22 0.73 Yes 47 60.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89721322 + NM_000314 PTEN 0 . . . 5.05 75.02 16 4.58 No 10 0.55 No 0 0 No -20 0.62 No 40 75.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1224378 + NM_000455 STK11 0 . . . 2.91 70.37 17 4.58 No 76 -4.83 No 0 0 No -30 0.34 No 14 17.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848965 - NM_032043 BRIP1 0 . . . 0.93 77.05 21 4.58 No 60 0.88 Yes 0 0 No -20 0.72 Yes 50 39.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68823377 + NM_133509 RAD51B 0 . . . 0.11 70.44 26 5.16 No 44 0.24 No 0 0 No -23 0.83 Yes 45 70.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190705614 + NM_000534 PMS1 0 . . . 4.97 78.91 18 5.08 No 60 1.56 Yes 0 0 No -18 0.46 No 46 80.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68600372 + NM_133509 RAD51B 0 . . . 5.52 83.82 21 4.58 No 6 1.26 Yes 0 0 No -23 0.57 No 52 87.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68431939 + NM_133509 RAD51B 0 . . . 7.98 81.69 16 4.69 No 68 1.01 Yes 0 0 No -19 0.39 No 45 96.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68955551 + NM_133509 RAD51B 0 . . . 7.37 88.52 13 4.8 No 40 1.05 Yes 0 0 No -23 0.41 No 48 71.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47732800 + NM_000251 MSH2 0 . . . 6.89 78.36 23 4.09 No 8 1.03 Yes 0 0 No -22 0.4 No 50 57.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190685758 + NM_000534 PMS1 0 . . . 3.7 76.71 19 7.07 Yes 42 0.49 No 0 0 No -18 0.6 No 39 61.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56775535 + NM_058216 RAD51C 0 . . . 2.22 74.38 46 5.86 Yes 52 0.05 No 0 0 No -29 0.72 Yes 48 74.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75478495 - NM_001040108 MLH3 0 . . . 0 64.13 32 4.44 No 27 1.54 Yes 0 0 No -31 0.71 Yes 31 82.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108186100 + NM_000051 ATM 0 . . . 1.39 64.1 26 5.11 No 60 0.42 No 0 0 No -28 0.55 No 33 54.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89649687 + NM_000314 PTEN 0 . . . 0.47 72 14 4 No 76 1.47 Yes 0 0 No -25 0.51 No 35 83.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105203902 + NM_021930 RINT1 0 . . . 7.68 91.38 23 5 No 52 1.24 Yes 0 0 No -20 0.55 No 49 93.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84399581 - NM_139076 FAM175A 0 . . . 4 69.08 37 6 Yes 1 0.12 No 0 0 No -36 0.58 No 57 47.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68853615 + NM_004360 CDH1 0 . . . 5.47 77.5 30 4 No 32 1.03 Yes 0 0 No -29 0.75 Yes 26 67.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48018862 + NM_000179 MSH6 0 . . . 3.77 77.41 18 6.33 Yes 2 1.52 Yes 0 0 No -29 0.55 No 56 27.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29116415 - NM_001005735 CHEK2 0 . . . 5.39 71.11 22 4.58 No 68 -5.08 No 0 0 No -21 0.85 Yes 47 56.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59933052 - NM_032043 BRIP1 0 . . . 0.23 0 14 7.55 Yes 23 -3.54 No 0 0 No -22 0.45 No 52 58.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59863192 - NM_032043 BRIP1 0 . . . 8.82 80.48 38 6.06 Yes 31 0.29 No 0 0 No -30 0.92 Yes 49 94.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68286709 + NM_133509 RAD51B 0 . . . 0.71 70.08 25 5.39 No 76 1.18 Yes 0 0 No -22 0.58 No 34 53.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59909815 - NM_032043 BRIP1 0 . . . 4.59 71.43 32 5.44 No 37 0.05 No 0 0 No -19 0.47 No 45 46.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32915392 + NM_000059 BRCA2 0 . . . 0.58 0 34 6.76 Yes 44 0.75 No 0 0 No -29 0.79 Yes 49 61.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68958706 + NM_133509 RAD51B 0 . . . 8.33 83.18 13 5.48 No 70 -0.4 No 0 0 No -23 0.33 No 41 77.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68524716 + NM_133509 RAD51B 0 . . . 2.28 74.95 14 4.05 No 45 0.09 No 0 0 No -22 0.65 No 22 59.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68720991 + NM_133509 RAD51B 0 . . . 3.16 75.32 50 6.66 Yes 63 0.63 No 0 0 No -25 0.97 Yes 45 63.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108241681 + NM_000051 ATM 0 . . . 1.43 74.91 22 4.8 No 62 -1.17 No 0 0 No -21 0.83 Yes 34 85.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37066007 + NM_000249 MLH1 0 . . . 4.44 78.51 25 5.91 Yes 31 1.26 Yes 0 0 No -24 0.48 No 50 75.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59897487 - NM_032043 BRIP1 0 . . . 6.07 77.6 16 4.69 No 58 1.39 Yes 0 0 No -25 0.63 No 52 57.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37070720 + NM_000249 MLH1 0 . . . 1.03 0 10 4.8 No 71 0.67 No 0 0 No -25 0.55 No 45 53.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68687155 + NM_133509 RAD51B 0 . . . 2.25 76.23 20 5.45 No -2 0.06 No 0 0 No -28 0.72 Yes 42 67.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68530030 + NM_133509 RAD51B 0 . . . 5.62 76.91 32 5.18 No 63 1.74 Yes 0 0 No -29 0.55 No 49 87.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89727587 + NM_000314 PTEN 0 . . . 4.8 73.89 36 5.9 Yes 4 0.79 Yes 0 0 No -31 0.34 No 41 71.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68762526 + NM_133509 RAD51B 0 . . . 5.14 76.29 23 5.1 No 8 1.14 Yes 0 0 No -22 0.8 Yes 50 94.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32971350 + NM_000059 BRCA2 0 . . . 1.68 81.73 19 5 No 61 -3.11 No 0 0 No -18 0.64 No 50 76.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131908893 + NM_005732 RAD50 0 . . . 1.46 71.92 20 5.1 No 32 -2.24 No 0 0 No -19 0.55 No 26 78.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69031171 + NM_133509 RAD51B 0 . . . 4.13 82.97 29 6.32 Yes 27 -2.88 No 0 0 No -28 0.86 Yes 46 58.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29100458 - NM_001005735 CHEK2 0 . . . 1.84 66.31 24 6.14 Yes 47 0.69 No 0 0 No -23 0.9 Yes 42 58.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190720426 + NM_000534 PMS1 0 . . . 1.47 70.18 18 4.9 No 40 0.38 No 0 0 No -17 0.72 Yes 36 73.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59808315 - NM_032043 BRIP1 0 . . . 1.93 80.54 15 4.98 No 75 -3.69 No 0 0 No -23 0.53 No 44 83.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68559757 + NM_133509 RAD51B 0 . . . 2.91 84.94 22 6.21 Yes 7 0.55 No 0 0 No -35 0.67 Yes 33 54.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68367585 + NM_133509 RAD51B 0 . . . 0.92 0 26 4.46 No 27 0.88 Yes 0 0 No -25 0.57 No 31 70.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37042867 + NM_000249 MLH1 0 . . . 0.19 62.92 16 4.02 No 29 1 Yes 0 0 No -22 0.85 Yes 46 57.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32888564 + NM_000059 BRCA2 0 . . . 6.62 72.77 36 5.9 Yes 76 1.12 Yes 0 0 No -25 0.59 No 53 72.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190672105 + NM_000534 PMS1 0 . . . 6.44 71.63 28 5.47 No 10 0.54 No 0 0 No -30 0.41 No 38 38.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47792058 + NM_000251 MSH2 0 . . . 0.24 68.66 22 4.92 No 63 0.15 No 0 0 No -21 0.82 Yes 37 34.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108123674 + NM_000051 ATM 0 . . . 6.85 79.72 19 4.52 No 8 1.32 Yes 0 0 No -22 0.37 No 47 71.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68597110 + NM_133509 RAD51B 0 . . . 0.49 58.37 33 6.21 Yes 39 0.64 No 0 0 No -32 0.9 Yes 18 65.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59812983 - NM_032043 BRIP1 0 . . . 8.32 88.27 23 4.78 No 19 0.91 Yes 0 0 No -22 0.71 Yes 39 82.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68570877 + NM_133509 RAD51B 0 . . . 2.99 82.46 15 5.57 Yes 59 -2.16 No 0 0 No -24 0.47 No 46 68.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94216479 - NM_005591 MRE11 0 . . . 1.08 0 21 5.17 No -3 0.85 Yes 0 0 No -20 0.59 No 52 43.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68754947 + NM_133509 RAD51B 0 . . . 2.72 75.07 39 5.31 No 76 0.32 No 0 0 No -33 0.6 No 53 66.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68381994 + NM_133509 RAD51B 0 . . . 1.67 76.91 28 5.83 Yes 70 0.32 No 0 0 No -27 0.69 Yes 43 72.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68416570 + NM_133509 RAD51B 0 . . . 4.57 80.02 16 10.33 Yes 11 1.07 Yes 0 0 No -27 0.38 No 40 58.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89718620 + NM_000314 PTEN 0 . . . 2.26 77.35 21 4.94 No 70 0.86 Yes 0 0 No -20 0.4 No 54 59.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1212512 + NM_000455 STK11 0 . . . 4.94 78.63 9 3.87 No 16 0.68 No 0 0 No -26 0.54 No 42 87.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108223365 + NM_000051 ATM 0 . . . 1.77 77.44 17 4.69 No 72 -2.91 No 0 0 No -36 0.36 No 50 67.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68454929 + NM_133509 RAD51B 0 . . . 0.36 74.68 22 5.7 Yes 4 0.28 No 0 0 No -21 0.93 Yes 54 55.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68641066 + NM_133509 RAD51B 0 . . . 3.16 71.51 15 4.58 No 59 -4.2 No 0 0 No -32 0.44 No 47 55.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1230400 + NM_000455 STK11 0 . . . 3.75 70.34 16 4.69 No 68 0.95 Yes 0 0 No -19 0.29 No 17 52.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33448099 - NM_002878 RAD51D 0 . . . 2.4 69.86 22 5.75 Yes 0 0.15 No 0 0 No -21 0.61 No 41 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41278042 - NM_007294 BRCA1 0 . . . 6.78 82.94 17 5.2 No 71 1.62 Yes 0 0 No -20 0.64 No 46 79.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89669008 + NM_000314 PTEN 0 . . . 2.72 68.71 17 6.37 Yes 12 -0.97 No 0 0 No -34 0.69 Yes 32 82.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68479012 + NM_133509 RAD51B 0 . . . 5.31 72.94 16 4.69 No 58 -3.14 No 0 0 No -43 0.39 No 40 48.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108208523 + NM_000051 ATM 0 . . . 4.09 68.51 54 7.54 Yes 64 0.37 No 0 0 No -25 0.89 Yes 46 87.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68755315 + NM_133509 RAD51B 0 . . . 0.78 0 25 7.75 Yes 8 0.52 No 0 0 No -24 0.93 Yes 44 29.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108115615 + NM_000051 ATM 0 . . . 0.52 0 16 4.96 No 43 0.73 No 0 0 No -27 0.74 Yes 27 25.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29101585 - NM_001005735 CHEK2 0 . . . 2.59 61.78 30 5.26 No -2 0.09 No 0 0 No -29 0.45 No 43 44.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215618889 - NM_000465 BARD1 0 . . . 6.32 82.59 29 7.09 Yes 38 0.25 No 0 0 No -28 0.89 Yes 49 32.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152371082 - NM_005431 XRCC2 0 . . . 4.03 74.48 67 6.78 Yes 56 0.54 No 0 0 No -29 0.83 Yes 45 61.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68902389 + NM_133509 RAD51B 0 . . . 10.85 87.39 26 5.66 Yes 39 1.24 Yes 0 0 No -25 0.62 No 49 75.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89662825 + NM_000314 PTEN 0 . . . 6.88 80.35 17 5.14 No 12 1.44 Yes 0 0 No -19 0.33 No 40 70.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68340505 + NM_133509 RAD51B 0 . . . 7.7 85.1 46 6.78 Yes 1 0.51 No 0 0 No -45 0.78 Yes 49 59.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1205124 + NM_000455 STK11 0 . . . 1.72 67.66 24 5.08 No 68 -2.87 No 0 0 No -29 0.56 No 49 46.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59764024 - NM_032043 BRIP1 0 . . . 7.63 91.01 28 4.43 No 26 0.28 No 0 0 No -27 0.52 No 47 58.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59909923 - NM_032043 BRIP1 0 . . . 5.58 95.15 17 4.46 No 8 0.66 No 0 0 No -16 0.74 Yes 50 56.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68466675 + NM_133509 RAD51B 0 . . . 0.28 73.14 27 6.57 Yes 60 -5.84 No 0 0 No -26 0.94 Yes 49 53.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68758034 + NM_133509 RAD51B 0 . . . 1.08 84.22 47 7.61 Yes 33 1.18 Yes 0 0 No -46 0.57 No 25 44.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68602689 + NM_133509 RAD51B 0 . . . 2.95 71.81 19 4.8 No 54 1.09 Yes 0 0 No -57 0.47 No 50 94.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68708872 + NM_133509 RAD51B 0 . . . 0.54 0 15 3.87 No 20 0.85 Yes 0 0 No -25 0.82 Yes 38 85.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68315288 + NM_133509 RAD51B 0 . . . 0.98 0 27 5.32 No 45 1.03 Yes 0 0 No -30 0.76 Yes 38 81.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56782656 + NM_058216 RAD51C 0 . . . 6.66 77.52 30 5.47 No 60 1.13 Yes 0 0 No -29 0.52 No 42 71.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59913360 - NM_032043 BRIP1 0 . . . 5.3 79.14 22 6.08 Yes 17 2.01 Yes 0 0 No -22 0.42 No 41 86.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89627852 + NM_000314 PTEN 0 . . . 0.01 57.9 28 5.83 Yes 64 1.49 Yes 0 0 No -23 0.57 No 40 58.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47687378 + NM_000251 MSH2 0 . . . 0.15 69.66 28 4.77 No 20 1.03 Yes 0 0 No -20 0.76 Yes 38 93.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6011278 - NM_000535 PMS2 0 . . . 4.15 78.19 20 4.71 No 62 -3.86 No 0 0 No -28 0.65 No 41 67.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41005625 + NM_001164269 RAD51 0 . . . 3.25 80.12 17 6.93 Yes 8 1.06 Yes 0 0 No -25 0.53 No 50 65.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68917781 + NM_133509 RAD51B 0 . . . 7.43 88.24 13 5.29 No 26 0.63 No 0 0 No -22 0.52 No 47 93.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131965174 + NM_005732 RAD50 0 . . . 0.89 0 31 6 Yes 58 -3.42 No 0 0 No -24 0.72 Yes 60 38.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190694528 + NM_000534 PMS1 0 . . . 0.54 0 26 6.12 Yes 30 1.4 Yes 0 0 No -21 0.54 No 28 51.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75491356 - NM_001040108 MLH3 0 . . . 1.89 76.2 52 5.6 Yes 70 0.5 No 0 0 No -26 0.78 Yes 43 46.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108166484 + NM_000051 ATM 0 . . . 2.14 0 13 4.68 No 15 0.98 Yes 0 0 No -43 0.23 No 43 82.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108240588 + NM_000051 ATM 0 . . . 4.62 73.08 21 5.3 No -4 0.35 No 0 0 No -20 0.66 No 41 70.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152350383 - NM_005431 XRCC2 0 . . . 3.23 75.03 61 7.64 Yes 57 -4.48 No 0 0 No -33 0.54 No 39 47.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48020013 + NM_000179 MSH6 0 . . . 7.63 85.05 21 5.57 Yes 28 1.1 Yes 0 0 No -26 0.48 No 38 71.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108130661 + NM_000051 ATM 0 . . . 2.91 72.92 44 6.77 Yes 50 1.45 Yes 0 0 No -39 0.67 Yes 36 82.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48009281 + NM_000179 MSH6 0 . . . 3.31 82.3 18 4.5 No 9 0.85 Yes 0 0 No -17 0.54 No 49 95.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7577340 - NM_000546 TP53 0 . . . 5.92 79.08 16 5.08 No 66 1.42 Yes 0 0 No -23 0.75 Yes 55 32.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68307366 + NM_133509 RAD51B 0 . . . 2.81 70.65 16 4.39 No 16 0.64 No 0 0 No -20 0.81 Yes 46 82.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32918282 + NM_000059 BRCA2 0 . . . 5.13 82.07 17 5.54 No -2 0.55 No 0 0 No -26 0.64 No 50 59.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84402115 - NM_139076 FAM175A 0 . . . 1.27 83.69 17 5.92 Yes 10 1.84 Yes 0 0 No -28 0.69 Yes 48 92.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68807844 + NM_004360 CDH1 0 . . . 1.02 0 30 5.38 No 16 1.25 Yes 0 0 No -29 0.44 No 42 68.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131947537 + NM_005732 RAD50 0 . . . 2.15 0 33 7.88 Yes 43 0.89 Yes 0 0 No -27 0.39 No 15 55.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1224841 + NM_000455 STK11 0 . . . 1.24 77.16 14 4.24 No 69 -5.3 No 0 0 No -37 0.48 No 54 64.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37053396 + NM_000249 MLH1 0 . . . 1.79 72.74 29 5.39 No 28 0.15 No 0 0 No -28 0.48 No 42 78.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89676389 + NM_000314 PTEN 0 . . . 1.08 0 29 5.77 Yes 70 -6.26 No 0 0 No -20 0.47 No 49 34.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68852440 + NM_133509 RAD51B 0 . . . 4.45 80.6 19 4.58 No 42 0.88 Yes 0 0 No -18 0.68 Yes 47 82.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47795248 + NM_000251 MSH2 0 . . . 2.47 0 21 5.7 Yes 47 -2.85 No 0 0 No -26 0.74 Yes 53 64.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23617699 - NM_024675 PALB2 0 . . . 4.09 88.55 18 4.89 No 20 1.34 Yes 0 0 No -23 0.15 No 48 77.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59896380 - NM_032043 BRIP1 0 . . . 3.87 80.12 53 7.54 Yes 7 1.14 Yes 0 0 No -29 0.54 No 51 81.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68808705 + NM_133509 RAD51B 0 . . . 1.93 71.06 28 6.37 Yes 29 -2.42 No 0 0 No -27 0.75 Yes 47 78.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68394692 + NM_133509 RAD51B 0 . . . 9.11 86.44 14 4.62 No 44 0.33 No 0 0 No -18 0.72 Yes 35 75.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68637248 + NM_133509 RAD51B 0 . . . 1.14 56.01 29 6.94 Yes 55 1.42 Yes 0 0 No -28 0.87 Yes 40 56.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89702860 + NM_000314 PTEN 0 . . . 3.52 74.25 108 10.36 Yes 17 1.6 Yes 0 0 No -27 0.88 Yes 45 65.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59784641 - NM_032043 BRIP1 0 . . . 1.27 71.51 25 4.01 No 73 0.28 No 0 0 No -29 0.69 Yes 58 25.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7588370 - NM_000546 TP53 0 . . . 2.51 71.62 15 5.38 No 49 -4.39 No 0 0 No -28 0.35 No 33 47.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37051395 + NM_000249 MLH1 0 . . . 3.37 68.95 23 4.8 No 16 0.97 Yes 0 0 No -25 0.42 No 42 91.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108234416 + NM_000051 ATM 0 . . . 0.52 64.5 28 5.83 Yes 10 0.46 No 0 0 No -27 0.86 Yes 48 50.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84404597 - NM_139076 FAM175A 0 . . . 0.73 62.86 41 7.1 Yes 65 -3.36 No 0 0 No -28 0.92 Yes 42 71.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68428000 + NM_133509 RAD51B 0 . . . 1.56 79.17 12 4.59 No 32 0.63 No 0 0 No -21 0.52 No 26 81.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32911172 + NM_000059 BRCA2 0 . . . 1.55 79.38 25 5.2 No 3 0.6 No 0 0 No -24 0.93 Yes 41 50.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68717648 + NM_133509 RAD51B 0 . . . 0.39 72.13 28 5.39 No 12 -1.07 No 0 0 No -42 0.34 No 46 49.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89733266 + NM_000314 PTEN 0 . . . 3.07 75.12 39 6.57 Yes 75 2 Yes 0 0 No -25 0.41 No 46 58.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59902702 - NM_032043 BRIP1 0 . . . 1.3 65.32 126 10.23 Yes 75 1.17 Yes 0 0 No -22 0.68 Yes 52 35.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215614379 - NM_000465 BARD1 0 . . . 4.44 75.62 26 5.35 No 15 1.3 Yes 0 0 No -25 0.45 No 43 75.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68931347 + NM_133509 RAD51B 0 . . . 1.12 64.48 24 5.93 Yes 8 2.19 Yes 0 0 No -23 0.58 No 46 77.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59904712 - NM_032043 BRIP1 0 . . . 2.57 83.98 44 7.02 Yes 35 0.51 No 0 0 No -21 0.36 No 41 50.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68953237 + NM_133509 RAD51B 0 . . . 5.61 84.34 15 4.86 No 55 -3.14 No 0 0 No -57 0.54 No 52 63.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105197985 + NM_021930 RINT1 0 . . . 3.61 63.19 20 5.95 Yes 74 -6.24 No 0 0 No -23 0.73 Yes 52 28.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68310469 + NM_133509 RAD51B 0 . . . 7.75 84.58 27 5.04 No 21 1.37 Yes 0 0 No -26 0.77 Yes 44 81.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68835796 + NM_004360 CDH1 0 . . . 8.87 81.35 20 5.1 No 27 0.42 No 0 0 No -23 0.46 No 36 46.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215633849 - NM_000465 BARD1 0 . . . 5.4 80.19 17 4.58 No 72 1.12 Yes 0 0 No -16 0.74 Yes 43 79.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68387742 + NM_133509 RAD51B 0 . . . 1.26 66 18 5.57 Yes 72 -1.22 No 0 0 No -25 0.46 No 51 76.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68705999 + NM_133509 RAD51B 0 . . . 7.95 80.9 14 5.6 Yes 3 2.14 Yes 0 0 No -29 0.48 No 39 95.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68319216 + NM_133509 RAD51B 0 . . . 8.68 75.73 45 5.98 Yes 1 0.49 No 0 0 No -44 0.62 No 41 66.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69043105 + NM_133509 RAD51B 0 . . . 5.95 86.19 30 8.75 Yes 67 -2.44 No 0 0 No -29 0.87 Yes 48 89.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68759383 + NM_133509 RAD51B 0 . . . 0.64 0 15 5.08 No 63 0.86 Yes 0 0 No -21 0.39 No 51 63.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108102265 + NM_000051 ATM 0 . . . 1.42 69.46 22 5.66 Yes 64 -2.92 No 0 0 No -21 0.92 Yes 45 34.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32918858 + NM_000059 BRCA2 0 . . . 6.18 88.24 34 5.92 Yes 53 0.88 Yes 0 0 No -33 0.69 Yes 41 53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68691226 + NM_133509 RAD51B 0 . . . 1.59 65.49 30 5.72 Yes 21 -1.18 No 0 0 No -33 0.53 No 44 66.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105181026 + NM_021930 RINT1 0 . . . 4.69 85.02 35 7.23 Yes 5 0.94 Yes 0 0 No -41 0.57 No 53 56.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68619456 + NM_133509 RAD51B 0 . . . 9.5 86.44 18 4.55 No 20 1.19 Yes 0 0 No -53 0.86 Yes 43 58.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68564478 + NM_133509 RAD51B 0 . . . 2.11 69.09 12 5.39 No 15 2.29 Yes 0 0 No -22 0.36 No 43 86.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41241831 - NM_007294 BRCA1 0 . . . 2.32 81.83 27 4.58 No 33 0.9 Yes 0 0 No -52 0.58 No 42 39.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190735708 + NM_000534 PMS1 0 . . . 1.41 74.35 17 4.67 No 10 0.73 No 0 0 No -20 0.42 No 48 59.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21985836 - NM_000077 CDKN2A 0 . . . 4.21 83.9 33 5.7 Yes 41 1.17 Yes 0 0 No -28 0.58 No 46 43.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69016738 + NM_133509 RAD51B 0 . . . 3.84 88.73 30 5.39 No 44 -3.5 No 0 0 No -22 0.49 No 46 38.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215605583 - NM_000465 BARD1 0 . . . 0.48 85.67 12 4.22 No 48 1.04 Yes 0 0 No -33 0.89 Yes 47 85.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59909372 - NM_032043 BRIP1 0 . . . 1.89 78.25 27 5.27 No 26 1.02 Yes 0 0 No -26 0.54 No 32 75.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190716468 + NM_000534 PMS1 0 . . . 7.19 84.86 16 5.1 No 44 1.47 Yes 0 0 No -21 0.56 No 52 72.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41213235 - NM_007294 BRCA1 0 . . . 0.01 63.25 25 5.39 No 8 0.48 No 0 0 No -22 0.84 Yes 40 39.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41253351 - NM_007294 BRCA1 0 . . . 1.85 63.12 14 6.24 Yes 47 0.54 No 0 0 No -25 0.64 No 42 45.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59840745 - NM_032043 BRIP1 0 . . . 2.44 0 32 5.74 Yes 65 -4.02 No 0 0 No -28 0.32 No 43 84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68729835 + NM_133509 RAD51B 0 . . . 4.57 84.26 16 4.69 No 8 0.77 No 0 0 No -35 0.5 No 44 78.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59832621 - NM_032043 BRIP1 0 . . . 5.87 85.17 25 5.39 No 67 0.69 No 0 0 No -22 0.8 Yes 44 62.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152365776 - NM_005431 XRCC2 0 . . . 3.23 0 97 7.66 Yes 17 0.14 No 0 0 No -26 0.84 Yes 33 44.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41232905 - NM_007294 BRCA1 0 . . . 5.9 82.18 25 5.21 No 49 0.9 Yes 0 0 No -29 0.45 No 39 47.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47783248 + NM_000251 MSH2 0 . . . 0.93 82.73 12 4.62 No 18 1.03 Yes 0 0 No -19 0.47 No 52 74.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59902643 - NM_032043 BRIP1 0 . . . 3 83.86 19 5.66 Yes 40 0.86 Yes 0 0 No -18 0.63 No 18 53.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47749214 + NM_000251 MSH2 0 . . . 0.49 0 34 6.42 Yes 45 0.51 No 0 0 No -33 0.72 Yes 20 19.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69003908 + NM_133509 RAD51B 0 . . . 2.17 71.98 25 5.84 Yes 19 0.5 No 0 0 No -27 0.75 Yes 57 50.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84391317 - NM_139076 FAM175A 0 . . . 2.32 68.52 21 7.68 Yes 64 0.48 No 0 0 No -20 0.78 Yes 48 69.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68433354 + NM_133509 RAD51B 0 . . . 4.48 63.61 30 9.54 Yes 47 0.77 Yes 0 0 No -29 0.67 Yes 44 78.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33426730 - NM_002878 RAD51D 0 . . . 3.76 67.91 12 5 No 27 0.13 No 0 0 No -58 0.79 Yes 46 43.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215668599 - NM_000465 BARD1 0 . . . 3.6 74.38 20 4.26 No 9 1.29 Yes 0 0 No -19 0.66 Yes 49 88.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32943604 + NM_000059 BRCA2 0 . . . 0.52 66.06 17 5.37 No 36 1.35 Yes 0 0 No -52 0.48 No 36 59.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215662339 - NM_000465 BARD1 0 . . . 6.22 77.71 24 4.8 No 50 -4.06 No 0 0 No -23 0.78 Yes 42 68.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131907734 + NM_005732 RAD50 0 . . . 6.7 86.11 18 5.4 No 6 1.02 Yes 0 0 No -29 0.36 No 41 61.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41269563 - NM_007294 BRCA1 0 . . . 4.13 78.28 24 5.1 No 60 -2.03 No 0 0 No -23 0.75 Yes 48 64.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37065821 + NM_000249 MLH1 0 . . . 0.18 63.84 28 5.83 Yes 17 0.77 No 0 0 No -27 0.73 Yes 41 66.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59806826 - NM_032043 BRIP1 0 . . . 1.26 73.52 29 5.66 Yes 50 0.62 No 0 0 No -28 0.85 Yes 43 47.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41202771 - NM_007294 BRCA1 0 . . . 3.86 76.19 19 5.48 No 69 -5.34 No 0 0 No -23 0.61 No 51 69.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68488816 + NM_133509 RAD51B 0 . . . 7.46 70.52 28 5.26 No 22 0.58 No 0 0 No -27 0.45 No 36 69.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94212236 - NM_005591 MRE11 0 . . . 3.56 73.84 36 4.7 No 14 1.62 Yes 0 0 No -35 0.63 No 44 93.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47730012 + NM_000251 MSH2 0 . . . 6.25 76.04 55 7.48 Yes 50 0.39 No 0 0 No -25 0.88 Yes 47 53.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23627873 - NM_024675 PALB2 0 . . . 1.57 74.22 24 4.93 No 74 -1.51 No 0 0 No -44 0.74 Yes 46 50.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108228784 + NM_000051 ATM 0 . . . 0.13 51.98 76 8.62 Yes 67 -5.2 No 0 0 No -29 0.86 Yes 49 73.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69024595 + NM_133509 RAD51B 0 . . . 2.07 67.77 16 4 No 62 1.36 Yes 0 0 No -31 0.62 No 54 62.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52442329 - NM_004656 BAP1 0 . . . 3.69 80.55 14 4.47 No 7 1.04 Yes 0 0 No -48 0.84 Yes 51 64.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89724841 + NM_000314 PTEN 0 . . . 3.06 78.24 46 5.1 No 5 1.09 Yes 0 0 No -40 0.82 Yes 45 89.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68862480 + NM_133509 RAD51B 0 . . . 1.31 74.46 79 8.54 Yes 39 -3.28 No 0 0 No -35 0.52 No 63 25.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131896420 + NM_005732 RAD50 0 . . . 4.35 89.16 15 4.58 No 23 1.23 Yes 0 0 No -24 0.64 No 31 69.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59805798 - NM_032043 BRIP1 0 . . . 1.95 63.51 22 5 No 37 0.91 Yes 0 0 No -21 0.77 Yes 21 83.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190648499 + NM_000534 PMS1 0 . . . 3.69 78.04 28 5.2 No 3 0.79 Yes 0 0 No -27 0.67 Yes 18 63.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215591705 - NM_000465 BARD1 0 . . . 7.07 87.71 13 5.1 No 56 -3.45 No 0 0 No -19 0.63 No 40 63.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23652348 - NM_024675 PALB2 0 . . . 7.28 80.78 21 6.62 Yes 34 2.3 Yes 0 0 No -25 0.42 No 45 72.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152349185 - NM_005431 XRCC2 0 . . . 3.73 66.04 21 4.31 No 52 -1.58 No 0 0 No -35 0.66 No 44 58.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68621272 + NM_133509 RAD51B 0 . . . 6.63 71.02 26 6.96 Yes 10 0.73 No 0 0 No -25 0.83 Yes 48 83.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68777920 + NM_004360 CDH1 0 . . . 1.04 69.37 13 4.89 No 66 0.24 No 0 0 No -17 0.29 No 50 36.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89692701 + NM_000314 PTEN 0 . . . 1.07 67.77 24 6.24 Yes 24 -3.48 No 0 0 No -23 0.82 Yes 46 73.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68839469 + NM_133509 RAD51B 0 . . . 0.55 0 24 5 No 4 0.94 Yes 0 0 No -40 0.76 Yes 37 96.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131909094 + NM_005732 RAD50 0 . . . 4.68 68.36 17 5.99 Yes -4 0.62 No 0 0 No -29 0.6 No 43 38.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84384583 - NM_139076 FAM175A 0 . . . 1.52 83.14 21 4.82 No 18 0.98 Yes 0 0 No -26 0.47 No 40 86.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47728029 + NM_000251 MSH2 0 . . . 2.04 67.57 21 4.47 No 19 0.96 Yes 0 0 No -17 0.47 No 39 86.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68454345 + NM_133509 RAD51B 0 . . . 2.56 85.74 27 7.16 Yes 60 -2.76 No 0 0 No -26 0.86 Yes 48 83.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68634142 + NM_133509 RAD51B 0 . . . 2.14 65.41 18 4.9 No 53 1.66 Yes 0 0 No -22 0.59 No 46 91.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108181435 + NM_000051 ATM 0 . . . 2.86 66.7 31 6.56 Yes 33 0.63 No 0 0 No -30 0.8 Yes 45 88.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21988896 - NM_000077 CDKN2A 0 . . . 4.85 83.23 17 3.93 No 76 -4.85 No 0 0 No -24 0.36 No 46 72.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56785225 + NM_058216 RAD51C 0 . . . 4.98 72.49 20 5.08 No 11 0.25 No 0 0 No -19 0.59 No 49 67.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68601616 + NM_133509 RAD51B 0 . . . 9.07 84.93 39 7.84 Yes 13 0.94 Yes 0 0 No -30 0.59 No 44 56.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108233376 + NM_000051 ATM 0 . . . 7.7 85.1 26 5.1 No 1 0.51 No 0 0 No -24 0.4 No 49 59.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190731137 + NM_000534 PMS1 0 . . . 0.85 64.42 31 5.51 No 44 0.22 No 0 0 No -31 0.41 No 59 61.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90994615 - NM_002485 NBN 0 . . . 3.95 78.08 17 4.7 No 45 1.13 Yes 0 0 No -27 0.75 Yes 50 67.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190700099 + NM_000534 PMS1 0 . . . 2.14 75.79 13 5.3 No 33 1.04 Yes 0 0 No -49 0.57 No 39 66.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68966556 + NM_133509 RAD51B 0 . . . 0.78 80.5 33 5.72 Yes 9 -1.52 No 0 0 No -32 0.72 Yes 49 37.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68397093 + NM_133509 RAD51B 0 . . . 0.95 0 35 6.09 Yes 2 0.42 No 0 0 No -34 0.95 Yes 15 61.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41215514 - NM_007294 BRCA1 0 . . . 1.08 67.88 18 5.24 No 6 -2.01 No 0 0 No -20 0.58 No 49 75.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69050334 + NM_133509 RAD51B 0 . . . 6.15 75.46 31 6.08 Yes 62 -6.2 No 0 0 No -30 0.74 Yes 48 47.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68918980 + NM_133509 RAD51B 0 . . . 2.02 79.05 11 5 No 38 -2.21 No 0 0 No -24 0.33 No 40 62.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68420821 + NM_133509 RAD51B 0 . . . 9.01 90 13 4.36 No 32 0.93 Yes 0 0 No -44 0.8 Yes 45 60.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32904293 + NM_000059 BRCA2 0 . . . 2.53 0 62 6.33 Yes 65 1.29 Yes 0 0 No -16 0.65 No 52 88.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89654204 + NM_000314 PTEN 0 . . . 0.07 66.24 13 4.44 No 33 0.62 No 0 0 No -22 0.39 No 19 86.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69098530 + NM_133509 RAD51B 0 . . . 6.83 88.49 17 4.8 No 6 1.03 Yes 0 0 No -39 0.8 Yes 52 71.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56794519 + NM_058216 RAD51C 0 . . . 0.85 74.47 48 8.54 Yes 47 1.06 Yes 0 0 No -47 0.79 Yes 54 78.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47778952 + NM_000251 MSH2 0 . . . 5.16 66.09 59 7.8 Yes 39 -4.06 No 0 0 No -25 0.52 No 53 61.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37093123 + NM_000249 MLH1 0 . . . 3.51 75.7 33 6.08 Yes -1 0.12 No 0 0 No -32 0.79 Yes 45 31.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89731997 + NM_000314 PTEN 0 . . . 5.02 81.85 22 5.22 No 8 1.34 Yes 0 0 No -21 0.78 Yes 50 86.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47684613 + NM_000251 MSH2 0 . . . 0.7 67.1 59 6.83 Yes 75 0.58 No 0 0 No -26 0.43 No 42 26.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68297513 + NM_133509 RAD51B 0 . . . 0.33 80.67 11 6 Yes 2 1.82 Yes 0 0 No -20 0.66 No 41 61.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68970354 + NM_133509 RAD51B 0 . . . 4.03 80.99 31 5.85 Yes 66 -3.46 No 0 0 No -30 0.76 Yes 50 76.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68524762 + NM_133509 RAD51B 0 . . . 5.18 75.18 23 5 No 1 1.09 Yes 0 0 No -20 0.34 No 31 52.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68375728 + NM_133509 RAD51B 0 . . . 1.58 76.3 13 5.08 No 57 1.1 Yes 0 0 No -31 0.54 No 12 70.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215658484 - NM_000465 BARD1 0 . . . 6.18 85.34 29 5.79 Yes 1 0.94 Yes 0 0 No -28 0.65 No 46 80.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190668824 + NM_000534 PMS1 0 . . . 7.12 77.02 20 5.66 Yes 41 0.67 No 0 0 No -19 0.61 No 44 82.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68292491 + NM_133509 RAD51B 0 . . . 3.06 84.95 29 5.48 No 72 0.85 Yes 0 0 No -28 0.83 Yes 25 84.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21988713 - NM_000077 CDKN2A 0 . . . 1.03 68.87 25 5.05 No 35 0.13 No 0 0 No -48 0.69 Yes 61 34.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131905492 + NM_005732 RAD50 0 . . . 4.54 73.3 18 4.59 No 10 0.39 No 0 0 No -20 0.74 Yes 41 82.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68499583 + NM_133509 RAD51B 0 . . . 5.55 67.75 22 5.1 No 54 0.65 No 0 0 No -21 0.94 Yes 41 83.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215613696 - NM_000465 BARD1 0 . . . 7.8 72.17 18 8.87 Yes 30 1.37 Yes 0 0 No -31 0.41 No 28 77.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59900231 - NM_032043 BRIP1 0 . . . 4.57 76.51 17 5.9 Yes 46 0.94 Yes 0 0 No -33 0.45 No 49 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89719180 + NM_000314 PTEN 0 . . . 7.46 91.19 15 4.58 No 4 0.22 No 0 0 No -19 0.4 No 45 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68825509 + NM_004360 CDH1 0 . . . 6.99 85.67 28 4.05 No 6 1.06 Yes 0 0 No -27 0.5 No 52 82.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32926315 + NM_000059 BRCA2 0 . . . 4.86 73.5 14 4.47 No 64 1.53 Yes 0 0 No -24 0.43 No 38 78.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41273157 - NM_007294 BRCA1 0 . . . 1.08 77.34 26 3.77 No 11 1.63 Yes 0 0 No -26 0.38 No 47 81.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68764622 + NM_133509 RAD51B 0 . . . 5.72 80.5 26 5.06 No 3 0.54 No 0 0 No -25 0.75 Yes 38 60.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29099440 - NM_001005735 CHEK2 0 . . . 0.87 67.58 15 6 Yes 31 0.71 No 0 0 No -21 0.41 No 27 53.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29118283 - NM_001005735 CHEK2 0 . . . 3.48 69.13 19 5.68 Yes 21 1.77 Yes 0 0 No -26 0.84 Yes 37 88.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108212040 + NM_000051 ATM 0 . . . 4.37 0 36 6.42 Yes 32 0.97 Yes 0 0 No -20 0.6 No 39 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68703351 + NM_133509 RAD51B 0 . . . 6.37 88.89 15 4.42 No 61 -3.84 No 0 0 No -32 0.42 No 44 63.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69102200 + NM_133509 RAD51B 0 . . . 4.87 71.76 45 6.34 Yes 1 0.04 No 0 0 No -25 0.7 Yes 44 93.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108182019 + NM_000051 ATM 0 . . . 5.53 81.28 20 4.96 No 72 0.43 No 0 0 No -24 0.74 Yes 44 85.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190665884 + NM_000534 PMS1 0 . . . 4.04 87.15 31 6.83 Yes 50 0.52 No 0 0 No -30 0.86 Yes 52 35.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56810055 + NM_058216 RAD51C 0 . . . 1.26 64.21 24 6 Yes 55 -4.29 No 0 0 No -23 0.86 Yes 43 73.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190704193 + NM_000534 PMS1 0 . . . 6.54 69.35 16 5.28 No 74 0.97 Yes 0 0 No -35 0.77 Yes 46 40.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108161634 + NM_000051 ATM 0 . . . 4.59 70.95 16 4.53 No -3 0.47 No 0 0 No -22 0.85 Yes 46 80.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131965318 + NM_005732 RAD50 0 . . . 0.08 71.57 21 5.2 No 29 0.35 No 0 0 No -20 0.57 No 29 26.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89701456 + NM_000314 PTEN 0 . . . 2.95 70.09 33 6.1 Yes 71 0.92 Yes 0 0 No -32 0.7 Yes 42 67.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68647829 + NM_133509 RAD51B 0 . . . 3.75 78.19 18 4.8 No 71 1.09 Yes 0 0 No -17 0.57 No 47 30.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68405171 + NM_133509 RAD51B 0 . . . 0.57 76.36 21 6.24 Yes 68 0.98 Yes 0 0 No -20 0.82 Yes 47 76.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37033199 + NM_000249 MLH1 0 . . . 5.31 83.35 16 4.69 No 72 1.08 Yes 0 0 No -24 0.67 Yes 51 73.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68520978 + NM_133509 RAD51B 0 . . . 6.57 78.87 36 5.12 No -4 0.73 No 0 0 No -35 0.92 Yes 41 85.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68806358 + NM_133509 RAD51B 0 . . . 0.37 68.1 26 5.88 Yes 39 1.18 Yes 0 0 No -25 0.71 Yes 31 77.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59913324 - NM_032043 BRIP1 0 . . . 0.95 0 25 5.39 No 53 1.99 Yes 0 0 No -24 0.84 Yes 54 50.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75519241 - NM_001040108 MLH3 0 . . . 1.59 84.12 33 6.65 Yes 58 0.57 No 0 0 No -32 0.29 No 49 67.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47737005 + NM_000251 MSH2 0 . . . 5.54 71.34 16 7.33 Yes 8 0.25 No 0 0 No -19 0.45 No 50 71.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68672016 + NM_133509 RAD51B 0 . . . 2.74 74.68 19 5 No 4 0.06 No 0 0 No -24 0.77 Yes 41 54.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68815809 + NM_004360 CDH1 0 . . . 4.27 69.17 20 5.74 Yes 2 1.27 Yes 0 0 No -19 0.76 Yes 44 50.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68663422 + NM_133509 RAD51B 0 . . . 0.6 62.48 21 5.87 Yes 21 0.9 Yes 0 0 No -20 0.88 Yes 28 81.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68851146 + NM_004360 CDH1 0 . . . 0.79 59.17 15 4.97 No 42 0.65 No 0 0 No -23 0.54 No 37 67.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68413630 + NM_133509 RAD51B 0 . . . 4.62 68.16 25 5.95 Yes 40 0.45 No 0 0 No -24 0.96 Yes 45 87.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32930810 + NM_000059 BRCA2 0 . . . 3.87 70.03 16 4.52 No 29 1.34 Yes 0 0 No -23 0.83 Yes 41 79.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68838544 + NM_133509 RAD51B 0 . . . 5.54 68.68 17 3.78 No 63 -4.32 No 0 0 No -20 0.68 Yes 45 87.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105182979 + NM_021930 RINT1 0 . . . 1.82 0 15 3 No 66 -1.77 No 0 0 No -18 0.58 No 48 88.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131981968 + NM_005732 RAD50 0 . . . 3.12 72.89 16 4.24 No 47 0.69 No 0 0 No -15 0.73 Yes 48 41.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152360779 - NM_005431 XRCC2 0 . . . 1.7 68.84 26 3.98 No 52 0.66 No 0 0 No -25 0.52 No 48 80.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68757176 + NM_133509 RAD51B 0 . . . 0.43 0 31 5.05 No 73 -1.83 No 0 0 No -30 0.8 Yes 51 43.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90991589 - NM_002485 NBN 0 . . . 4.99 85.95 13 4.36 No 31 0.53 No 0 0 No -24 0.67 Yes 46 78.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68834198 + NM_004360 CDH1 0 . . . 3.27 69.46 27 5 No 28 1.37 Yes 0 0 No -26 0.79 Yes 52 81.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68881374 + NM_133509 RAD51B 0 . . . 5.58 83.47 17 4.78 No 6 1.59 Yes 0 0 No -42 0.6 No 44 40.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89653523 + NM_000314 PTEN 0 . . . 0.46 75.94 62 8.06 Yes 56 0.57 No 0 0 No -55 0.45 No 28 84.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59940357 - NM_032043 BRIP1 0 . . . 5.73 83.51 35 7.67 Yes 6 0.96 Yes 0 0 No -34 0.68 Yes 46 58.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84395194 - NM_139076 FAM175A 0 . . . 1.4 83.16 34 5.09 No 34 0.43 No 0 0 No -33 0.54 No 50 66.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59914380 - NM_032043 BRIP1 0 . . . 4.69 71.96 16 5.65 Yes 44 0.94 Yes 0 0 No -28 0.82 Yes 51 44.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68352320 + NM_133509 RAD51B 0 . . . 3.1 81.1 25 6.01 Yes 46 0.38 No 0 0 No -24 0.79 Yes 47 94.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108140911 + NM_000051 ATM 0 . . . 1.56 71.39 46 7.07 Yes 54 -4.91 No 0 0 No -45 0.8 Yes 41 65.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47710189 + NM_000251 MSH2 0 . . . 2.4 74.17 17 6.62 Yes 16 1.71 Yes 0 0 No -36 0.63 No 28 58.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47689906 + NM_000251 MSH2 0 . . . 2.02 57.84 21 5.2 No 54 0.74 No 0 0 No -24 0.65 No 46 25.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47767774 + NM_000251 MSH2 0 . . . 8.39 79.84 25 6 Yes 11 0.21 No 0 0 No -29 0.5 No 47 82.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47680294 + NM_000251 MSH2 0 . . . 6 77.22 18 7.24 Yes 12 -2.71 No 0 0 No -29 0.64 No 46 88.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68864832 + NM_133509 RAD51B 0 . . . 4.79 75.3 34 5.47 No 56 0.74 No 0 0 No -26 0.66 No 35 72.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47793605 + NM_000251 MSH2 0 . . . 0.09 61.14 23 4.8 No 57 0.07 No 0 0 No -26 0.49 No 60 27.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108191792 + NM_000051 ATM 0 . . . 5.01 91.82 24 4.83 No 47 0.41 No 0 0 No -23 0.71 Yes 44 35.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68992984 + NM_133509 RAD51B 0 . . . 2.95 73.67 17 3.95 No 61 -3.67 No 0 0 No -26 0.94 Yes 43 61.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84381057 - NM_139076 FAM175A 0 . . . 0.95 0 15 5.2 No 52 0.91 Yes 0 0 No -26 0.71 Yes 41 47.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6018806 - NM_000535 PMS2 0 . . . 3.78 84 20 5.1 No 56 1.06 Yes 0 0 No -29 0.7 Yes 14 81.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94174318 - NM_005591 MRE11 0 . . . 8.25 85.57 22 4.69 No 64 1.01 Yes 0 0 No -45 0.39 No 45 76.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215675777 - NM_000465 BARD1 0 . . . 1.09 73.34 20 5.46 No 44 -3.44 No 0 0 No -19 0.58 No 49 48.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215658218 - NM_000465 BARD1 0 . . . 3.34 62.31 15 6.3 Yes 25 0.22 No 0 0 No -36 0.68 Yes 33 53.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89672336 + NM_000314 PTEN 0 . . . 0.77 0 19 3.59 No 65 0.46 No 0 0 No -17 0.17 No 25 49.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94151451 - NM_005591 MRE11 0 . . . 2.57 77.18 19 4.39 No -1 0.38 No 0 0 No -18 0.76 Yes 46 66.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68688905 + NM_133509 RAD51B 0 . . . 6.01 74.37 16 4.64 No 28 0.31 No 0 0 No -23 0.37 No 49 53.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59880098 - NM_032043 BRIP1 0 . . . 0.79 76.46 21 5.74 Yes 61 -3.46 No 0 0 No -20 0.73 Yes 51 43.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69057450 + NM_133509 RAD51B 0 . . . 10.48 87.31 46 6.93 Yes 14 1.63 Yes 0 0 No -20 0.71 Yes 44 95.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68942682 + NM_133509 RAD51B 0 . . . 1.07 0 35 6.39 Yes 57 0.71 No 0 0 No -34 0.66 No 33 32.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69149189 + NM_133509 RAD51B 0 . . . 2.4 79.53 38 6.26 Yes 4 -0.08 No 0 0 No -37 0.65 No 44 76.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68870301 + NM_133509 RAD51B 0 . . . 6.65 87.18 18 5.91 Yes 37 0.78 Yes 0 0 No -17 0.44 No 44 90.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90979887 - NM_002485 NBN 0 . . . 5.96 78.18 51 6.1 Yes 26 1.43 Yes 0 0 No -35 0.45 No 48 79.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32971167 + NM_000059 BRCA2 0 . . . 6.23 86.78 58 8.22 Yes 60 -4.16 No 0 0 No -25 0.39 No 45 59.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94215050 - NM_005591 MRE11 0 . . . 1.61 0 18 4.9 No 39 1.41 Yes 0 0 No -26 0.48 No 39 73.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37058697 + NM_000249 MLH1 0 . . . 5.55 75.98 36 6.08 Yes 13 1.32 Yes 0 0 No -35 0.91 Yes 45 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68294250 + NM_133509 RAD51B 0 . . . 5.32 78.28 39 6.32 Yes 71 1.23 Yes 0 0 No -38 0.53 No 49 52.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32952060 + NM_000059 BRCA2 0 . . . 1.12 75.31 33 7.68 Yes 33 0.23 No 0 0 No -32 0.94 Yes 48 84.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29107520 - NM_001005735 CHEK2 0 . . . 9.67 85.26 13 5.29 No 25 1.66 Yes 0 0 No -47 0.53 No 50 85.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68626034 + NM_133509 RAD51B 0 . . . 4.19 85.01 22 5.29 No 3 0.58 No 0 0 No -21 0.77 Yes 43 46.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68430968 + NM_133509 RAD51B 0 . . . 2.43 72.72 38 7.21 Yes 26 -2.81 No 0 0 No -35 0.5 No 50 84.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68910130 + NM_133509 RAD51B 0 . . . 10.56 92.31 18 4.8 No -2 1.18 Yes 0 0 No -47 0.46 No 49 43.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59767902 - NM_032043 BRIP1 0 . . . 6.76 80.44 22 5.33 No 25 1 Yes 0 0 No -21 0.82 Yes 44 87.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75487626 - NM_001040108 MLH3 0 . . . 0.92 76.63 20 4.91 No 67 -4.96 No 0 0 No -19 0.54 No 48 53.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47784033 + NM_000251 MSH2 0 . . . 0.35 65.53 18 6.12 Yes 58 -5.49 No 0 0 No -22 0.89 Yes 51 44.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47764171 + NM_000251 MSH2 0 . . . 1.36 73.25 17 4.8 No 7 1.55 Yes 0 0 No -48 0.67 Yes 32 64.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47792277 + NM_000251 MSH2 0 . . . 2.25 77.69 17 3.61 No 15 0.81 Yes 0 0 No -38 0.88 Yes 43 55.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131936925 + NM_005732 RAD50 0 . . . 6.24 82.31 46 8.05 Yes 59 1.04 Yes 0 0 No -23 0.63 No 55 57.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68821404 + NM_004360 CDH1 0 . . . 3.23 0 15 6.76 Yes 41 0.5 No 0 0 No -27 0.93 Yes 42 90.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68895415 + NM_133509 RAD51B 0 . . . 3.37 78.92 77 6.58 Yes 67 0.61 No 0 0 No -30 0.84 Yes 50 92.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215661342 - NM_000465 BARD1 0 . . . 3.5 0 27 5.29 No 71 -4.62 No 0 0 No -26 0.83 Yes 38 61.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89732877 + NM_000314 PTEN 0 . . . 5.08 76.86 43 5.18 No 58 1.12 Yes 0 0 No -24 0.89 Yes 39 50.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68374073 + NM_133509 RAD51B 0 . . . 5.14 80.48 13 4.8 No 12 0.36 No 0 0 No -18 0.39 No 46 94.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47800095 + NM_000251 MSH2 0 . . . 5.37 79.11 25 4.71 No 4 0.75 No 0 0 No -28 0.35 No 42 72.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23630138 - NM_024675 PALB2 0 . . . 3.79 85.34 26 4.99 No 11 -1.38 No 0 0 No -19 0.61 No 47 69.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105184707 + NM_021930 RINT1 0 . . . 8.95 86.79 60 6.58 Yes 68 0.8 Yes 0 0 No -22 0.61 No 46 57.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32947154 + NM_000059 BRCA2 0 . . . 4.19 0 29 6.09 Yes 13 0.91 Yes 0 0 No -28 0.83 Yes 41 72.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47792952 + NM_000251 MSH2 0 . . . 3.2 73.73 36 6.47 Yes 60 0.68 No 0 0 No -29 0.62 No 46 87.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68842201 + NM_133509 RAD51B 0 . . . 8.1 87.81 25 5.94 Yes 52 1.17 Yes 0 0 No -20 0.46 No 43 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59933317 - NM_032043 BRIP1 0 . . . 6.36 87.72 25 5.27 No 1 1.31 Yes 0 0 No -24 0.56 No 50 79.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41258809 - NM_007294 BRCA1 0 . . . 2.54 71.52 20 5.63 Yes 64 1.27 Yes 0 0 No -30 0.82 Yes 40 57.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56792209 + NM_058216 RAD51C 0 . . . 5.11 80.55 14 4.19 No 1 0.33 No 0 0 No -16 0.37 No 48 62.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68651225 + NM_133509 RAD51B 0 . . . 6.11 73.71 17 7.55 Yes 23 0.76 No 0 0 No -27 0.82 Yes 40 85.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69095142 + NM_133509 RAD51B 0 . . . 0.31 0 22 5.08 No 54 -2.33 No 0 0 No -21 0.64 No 44 35.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68403768 + NM_133509 RAD51B 0 . . . 4.99 76.27 32 4.12 No 4 0.62 No 0 0 No -26 0.35 No 18 49.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59924438 - NM_032043 BRIP1 0 . . . 4.1 74.28 17 4.8 No 2 1.09 Yes 0 0 No -23 0.55 No 48 65.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41272614 - NM_007294 BRCA1 0 . . . 3.25 80.12 14 4.86 No 8 1.2 Yes 0 0 No -22 0.68 Yes 50 88.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68783831 + NM_004360 CDH1 0 . . . 1.84 65.93 34 7.75 Yes 31 0.57 No 0 0 No -33 0.72 Yes 36 74.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68738112 + NM_133509 RAD51B 0 . . . 1.76 75.17 46 6.19 Yes 62 -4.83 No 0 0 No -46 0.72 Yes 45 52.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59846601 - NM_032043 BRIP1 0 . . . 5.96 83.9 22 4.77 No 6 0.82 Yes 0 0 No -21 0.78 Yes 44 62.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68860625 + NM_004360 CDH1 0 . . . 4.74 74.9 19 5.4 No 48 0.53 No 0 0 No -21 0.3 No 17 26.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40989343 + NM_001164269 RAD51 0 . . . 4.63 90.92 15 5 No 60 1.7 Yes 0 0 No -23 0.41 No 18 49.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47699241 + NM_000251 MSH2 0 . . . 7.29 90.25 18 6.77 Yes 70 -2.99 No 0 0 No -17 0.5 No 45 68.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59939009 - NM_032043 BRIP1 0 . . . 7.63 92.71 21 5.2 No 8 0.96 Yes 0 0 No -20 0.33 No 50 93.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89660622 + NM_000314 PTEN 0 . . . 6.36 77.1 17 3.55 No 16 1.33 Yes 0 0 No -19 0.82 Yes 42 83.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131969386 + NM_005732 RAD50 0 . . . 3.09 82.74 29 6.91 Yes 76 0.93 Yes 0 0 No -28 0.88 Yes 50 89.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68363112 + NM_133509 RAD51B 0 . . . 5.64 72.86 36 4.85 No 11 0.66 No 0 0 No -35 0.89 Yes 47 69.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47661100 + NM_000251 MSH2 0 . . . 2.67 79.66 21 5.68 Yes 34 -0.6 No 0 0 No -20 0.6 No 39 18.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68822296 + NM_004360 CDH1 0 . . . 0.84 0 15 5.84 Yes 39 0.01 No 0 0 No -19 0.43 No 45 73.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68724623 + NM_133509 RAD51B 0 . . . 3.74 63.14 29 8 Yes 51 1.53 Yes 0 0 No -28 0.93 Yes 49 46.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190721609 + NM_000534 PMS1 0 . . . 0.47 73.78 24 4.9 No 13 -2.13 No 0 0 No -23 0.82 Yes 53 67.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41195911 - NM_007294 BRCA1 0 . . . 3.82 71.02 34 5.56 Yes 51 0.39 No 0 0 No -33 0.5 No 33 45.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68768000 + NM_133509 RAD51B 0 . . . 4.09 68.75 25 7.22 Yes 72 -2.98 No 0 0 No -32 0.69 Yes 33 54.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40999960 + NM_001164269 RAD51 0 . . . 3.75 84.95 15 5 No 16 -1.49 No 0 0 No -18 0.31 No 43 42.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69008686 + NM_133509 RAD51B 0 . . . 1.86 69.32 61 7.09 Yes 17 0.8 Yes 0 0 No -25 0.67 Yes 51 58.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108187533 + NM_000051 ATM 0 . . . 3.43 69.91 28 5.62 Yes 73 1.17 Yes 0 0 No -27 0.61 No 43 41.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89642712 + NM_000314 PTEN 0 . . . 3.84 85.91 22 5.29 No 3 0.17 No 0 0 No -21 0.62 No 42 56.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68567825 + NM_133509 RAD51B 0 . . . 0.08 65.43 14 4.47 No 71 -5.05 No 0 0 No -30 0.88 Yes 57 47.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89674125 + NM_000314 PTEN 0 . . . 3.37 79.29 26 4.98 No 7 0.82 Yes 0 0 No -25 0.38 No 43 92.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104166930 - NM_001100119 XRCC3 0 . . . 0.9 0 28 5.08 No 41 -3.64 No 0 0 No -27 0.5 No 42 31.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23641104 - NM_024675 PALB2 0 . . . 0.77 64.06 20 4.47 No 62 0.87 Yes 0 0 No -19 0.39 No 50 31.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89639346 + NM_000314 PTEN 0 . . . 2.41 68.34 29 7.41 Yes 23 0.63 No 0 0 No -25 0.63 No 40 88.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59805732 - NM_032043 BRIP1 0 . . . 7.52 86.59 28 5.39 No 35 0.77 Yes 0 0 No -27 0.77 Yes 30 63.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90982393 - NM_002485 NBN 0 . . . 3.36 71.98 18 5.56 Yes 16 1.13 Yes 0 0 No -17 0.42 No 42 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68559561 + NM_133509 RAD51B 0 . . . 6.12 72.64 53 5.15 No 18 -1.75 No 0 0 No -48 0.81 Yes 48 73.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23647301 - NM_024675 PALB2 0 . . . 0.28 59.46 38 7.46 Yes 47 -3.32 No 0 0 No -23 0.59 No 53 60.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215588981 - NM_000465 BARD1 0 . . . 3.5 70.36 18 3.87 No 62 -2.43 No 0 0 No -27 0.44 No 52 55.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68337300 + NM_133509 RAD51B 0 . . . 1.28 74.72 14 4.89 No 75 1.07 Yes 0 0 No -22 0.92 Yes 43 22.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41238724 - NM_007294 BRCA1 0 . . . 1.05 0 38 7.68 Yes 17 1.29 Yes 0 0 No -37 0.8 Yes 41 86.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94181290 - NM_005591 MRE11 0 . . . 2.72 77.89 20 3.58 No 6 0.77 Yes 0 0 No -19 0.89 Yes 52 88.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75501466 - NM_001040108 MLH3 0 . . . 3.16 71.45 31 5.56 No 68 0.77 Yes 0 0 No -33 0.46 No 46 77.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68536524 + NM_133509 RAD51B 0 . . . 2.87 68.25 42 8.77 Yes 13 0.8 Yes 0 0 No -41 0.82 Yes 45 71.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68846869 + NM_004360 CDH1 0 . . . 0.49 82.27 35 6 Yes 62 -5.14 No 0 0 No -22 0.83 Yes 49 51.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215654588 - NM_000465 BARD1 0 . . . 1.26 0 15 3.04 No 62 0.97 Yes 0 0 No -27 0.35 No 39 43.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69075102 + NM_133509 RAD51B 0 . . . 2.19 0 26 6.02 Yes 27 0.78 Yes 0 0 No -25 0.6 No 31 81.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84394432 - NM_139076 FAM175A 0 . . . 0.58 51.18 19 3.15 No 66 0.29 No 0 0 No -59 0.46 No 47 32.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68859100 + NM_004360 CDH1 0 . . . 2.51 69.95 33 5.64 Yes 4 0.53 No 0 0 No -29 0.59 No 54 78.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215659605 - NM_000465 BARD1 0 . . . 2.76 63.12 35 6.08 Yes 66 -5.45 No 0 0 No -32 0.52 No 44 48.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68804533 + NM_133509 RAD51B 0 . . . 7.94 88.21 9 3.87 No 2 1.39 Yes 0 0 No -33 0.47 No 46 81.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152347176 - NM_005431 XRCC2 0 . . . 4.54 71.45 25 5.34 No 19 0.16 No 0 0 No -24 0.84 Yes 39 82.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56805877 + NM_058216 RAD51C 0 . . . 0.24 80.65 31 7.21 Yes 76 1.31 Yes 0 0 No -30 0.95 Yes 50 75.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105205298 + NM_021930 RINT1 0 . . . 1.08 56.76 26 5.31 No 59 -2.82 No 0 0 No -25 0.47 No 33 44.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59938224 - NM_032043 BRIP1 0 . . . 7.45 91.42 21 5 No 18 0.69 No 0 0 No -31 0.51 No 45 74.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68894390 + NM_133509 RAD51B 0 . . . 3.78 73.07 22 5.19 No 6 1.05 Yes 0 0 No -25 0.77 Yes 52 92.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69126255 + NM_133509 RAD51B 0 . . . 3.68 79.15 27 5.74 Yes 18 -1.84 No 0 0 No -26 0.79 Yes 45 83.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47688828 + NM_000251 MSH2 0 . . . 4.01 84.22 32 6.16 Yes 33 1 Yes 0 0 No -31 0.93 Yes 44 47.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94226805 - NM_005591 MRE11 0 . . . 1.47 0 15 6.41 Yes 30 0.09 No 0 0 No -23 0.71 Yes 28 77.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68723682 + NM_133509 RAD51B 0 . . . 1.62 0 31 5.91 Yes 10 1.13 Yes 0 0 No -30 0.64 No 40 91.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75490232 - NM_001040108 MLH3 0 . . . 4.32 83.33 13 5.29 No -4 1.29 Yes 0 0 No -54 0.78 Yes 45 82.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68531195 + NM_133509 RAD51B 0 . . . 4.88 74.62 23 5.73 Yes 22 0 No 0 0 No -22 0.66 No 47 60.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69012861 + NM_133509 RAD51B 0 . . . 4.33 68.22 18 5.39 No 20 0.22 No 0 0 No -17 0.6 No 38 65.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29086234 - NM_001005735 CHEK2 0 . . . 2.95 70.85 17 5.69 Yes 18 0.62 No 0 0 No -31 0.7 Yes 40 75.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190675323 + NM_000534 PMS1 0 . . . 0.25 67.75 23 4.87 No -4 0.55 No 0 0 No -22 0.8 Yes 50 40.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190657717 + NM_000534 PMS1 0 . . . 3.21 85.02 15 5.81 Yes 71 0.63 No 0 0 No -10 0.67 Yes 43 77.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75506220 - NM_001040108 MLH3 0 . . . 2.02 0 15 5.39 No 23 1.55 Yes 0 0 No -28 0.34 No 46 78.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41221733 - NM_007294 BRCA1 0 . . . 2.94 70.51 20 5.26 No 52 1.68 Yes 0 0 No -19 0.58 No 28 79.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47679183 + NM_000251 MSH2 0 . . . 1.78 57.91 13 5.1 No 0 0.93 Yes 0 0 No -19 0.63 No 58 36.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190679547 + NM_000534 PMS1 0 . . . 2.18 75.12 19 5.67 Yes 26 -3.32 No 0 0 No -23 0.8 Yes 46 69.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68784955 + NM_004360 CDH1 0 . . . 5.31 84.37 31 5.66 Yes 53 1 Yes 0 0 No -27 0.33 No 43 80.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6042385 - NM_000535 PMS2 0 . . . 2.43 83.45 17 4.74 No 58 1.47 Yes 0 0 No -24 0.44 No 44 64.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23616202 - NM_024675 PALB2 0 . . . 0.42 74.73 28 5.29 No 33 1.02 Yes 0 0 No -27 0.48 No 20 58.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56798343 + NM_058216 RAD51C 0 . . . 6.84 82.07 34 7.28 Yes 2 1.44 Yes 0 0 No -33 0.96 Yes 50 47.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69096116 + NM_133509 RAD51B 0 . . . 0.52 0 20 3.69 No -4 -1.86 No 0 0 No -25 0.73 Yes 37 89.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75519370 - NM_001040108 MLH3 0 . . . 3.39 78.63 31 4 No 70 -3.9 No 0 0 No -30 0.8 Yes 55 33.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68779842 + NM_133509 RAD51B 0 . . . 3.03 74.9 16 4.1 No 14 0.1 No 0 0 No -28 0.57 No 44 96.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47757003 + NM_000251 MSH2 0 . . . 0.9 71.89 20 4.93 No 9 0.13 No 0 0 No -40 0.49 No 49 55.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68951099 + NM_133509 RAD51B 0 . . . 3.01 0 9 3.87 No 38 0.33 No 0 0 No -36 0.77 Yes 20 76.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41260786 - NM_007294 BRCA1 0 . . . 5.56 68.15 12 5.74 Yes 64 1.17 Yes 0 0 No -28 0.5 No 49 81.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68313768 + NM_133509 RAD51B 0 . . . 7.24 84.21 20 4.83 No 1 1.62 Yes 0 0 No -26 0.74 Yes 44 92.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190701239 + NM_000534 PMS1 0 . . . 2.42 54.37 28 3.99 No 66 0.6 No 0 0 No -27 0.43 No 37 59.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68426971 + NM_133509 RAD51B 0 . . . 0.92 75.24 82 8.66 Yes 50 0.57 No 0 0 No -41 0.69 Yes 44 62.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108152597 + NM_000051 ATM 0 . . . 4.8 73.93 18 4.8 No 41 0.36 No 0 0 No -21 0.41 No 45 49.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215629002 - NM_000465 BARD1 0 . . . 7.84 74.29 15 5.02 No 54 1.17 Yes 0 0 No -20 0.26 No 53 74.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215641503 - NM_000465 BARD1 0 . . . 6.96 76.99 28 6.47 Yes 4 0.92 Yes 0 0 No -26 0.53 No 40 31.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94210806 - NM_005591 MRE11 0 . . . 8.12 92.75 23 6.22 Yes 28 1.51 Yes 0 0 No -26 0.58 No 30 79.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215589468 - NM_000465 BARD1 0 . . . 2.58 65.14 31 5.83 Yes 46 0.87 Yes 0 0 No -25 0.51 No 33 76.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94186455 - NM_005591 MRE11 0 . . . 1.07 79.51 64 5.6 Yes 55 0.08 No 0 0 No -20 0.37 No 49 54.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131902397 + NM_005732 RAD50 0 . . . 3.86 66.84 21 5.2 No 69 0.82 Yes 0 0 No -20 0.39 No 41 73.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190735092 + NM_000534 PMS1 0 . . . 3.66 75.16 23 5.29 No 71 -5.75 No 0 0 No -26 0.81 Yes 44 81.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190668288 + NM_000534 PMS1 0 . . . 0.68 69.14 19 4.9 No 51 1.03 Yes 0 0 No -26 0.79 Yes 53 60.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59775298 - NM_032043 BRIP1 0 . . . 0.24 74.68 18 5.44 No 53 0.63 No 0 0 No -21 0.36 No 49 60.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131953422 + NM_005732 RAD50 0 . . . 5.07 81.58 9 4.69 No 3 0.3 No 0 0 No -36 0.78 Yes 45 85.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68738453 + NM_133509 RAD51B 0 . . . 0.72 72.13 19 4.69 No 76 0.62 No 0 0 No -21 0.51 No 49 73.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68500419 + NM_133509 RAD51B 0 . . . 5.31 76.84 24 8.1 Yes 72 1.3 Yes 0 0 No -23 0.83 Yes 40 56.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215666150 - NM_000465 BARD1 0 . . . 1.19 72.9 23 5.89 Yes 53 0.41 No 0 0 No -22 0.61 No 49 80.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47706808 + NM_000251 MSH2 0 . . . 7.53 80.14 17 7.87 Yes 17 0.36 No 0 0 No -24 0.24 No 45 80.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59776122 - NM_032043 BRIP1 0 . . . 3.95 84.55 22 6.71 Yes 8 1.62 Yes 0 0 No -21 0.96 Yes 47 44.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68833551 + NM_004360 CDH1 0 . . . 5.8 78.49 20 6.71 Yes 7 1.04 Yes 0 0 No -30 0.5 No 51 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68824067 + NM_004360 CDH1 0 . . . 5.75 87.64 36 5.91 Yes 45 -3.25 No 0 0 No -25 0.58 No 39 50.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56778184 + NM_058216 RAD51C 0 . . . 5.58 80.97 34 5.83 Yes 6 1.12 Yes 0 0 No -33 0.65 No 43 54.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68498715 + NM_133509 RAD51B 0 . . . 5.4 72.41 21 6.36 Yes 19 1.57 Yes 0 0 No -25 0.83 Yes 39 61.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68950589 + NM_133509 RAD51B 0 . . . 9.19 90.22 18 5.39 No 17 0.85 Yes 0 0 No -22 0.54 No 41 95.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59767512 - NM_032043 BRIP1 0 . . . 0.9 64.36 23 4.8 No 10 1.21 Yes 0 0 No -22 0.61 No 48 85.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131967468 + NM_005732 RAD50 0 . . . 1.46 77.05 14 4.61 No 28 1.29 Yes 0 0 No -33 0.52 No 49 41.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40989318 + NM_001164269 RAD51 0 . . . 1.69 83.86 35 6.38 Yes 35 1.72 Yes 0 0 No -34 0.74 Yes 43 49.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131951119 + NM_005732 RAD50 0 . . . 5.17 78.29 21 7.21 Yes 70 -1.89 No 0 0 No -20 0.83 Yes 48 62.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190720204 + NM_000534 PMS1 0 . . . 8.38 85.65 28 5.38 No 3 1.18 Yes 0 0 No -27 0.72 Yes 22 71.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68579618 + NM_133509 RAD51B 0 . . . 3.43 69.29 32 6.72 Yes 14 -2.41 No 0 0 No -22 0.44 No 44 66.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108141333 + NM_000051 ATM 0 . . . 6.45 72.86 25 4.99 No -3 0.14 No 0 0 No -52 0.62 No 42 70.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1214801 + NM_000455 STK11 0 . . . 3.6 77.15 21 5.16 No 8 0.02 No 0 0 No -20 0.71 Yes 45 48.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47667290 + NM_000251 MSH2 0 . . . 0.02 71.04 24 5.48 No -4 0.59 No 0 0 No -23 0.56 No 47 53.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47636684 + NM_000251 MSH2 0 . . . 3.6 85.02 13 5.59 Yes 4 1.2 Yes 0 0 No -26 0.84 Yes 42 78.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108101238 + NM_000051 ATM 0 . . . 4.33 69.79 30 6.57 Yes 53 0.46 No 0 0 No -27 0.62 No 29 60.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37092666 + NM_000249 MLH1 0 . . . 0.55 0 22 5.1 No 45 1.07 Yes 0 0 No -21 0.89 Yes 18 30.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68564138 + NM_133509 RAD51B 0 . . . 4.77 73.07 39 8.96 Yes 22 1.64 Yes 0 0 No -38 0.5 No 36 90.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131951904 + NM_005732 RAD50 0 . . . 3.01 71.93 45 7 Yes 54 0.64 No 0 0 No -44 0.71 Yes 43 61.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68812587 + NM_133509 RAD51B 0 . . . 0.42 74.73 24 5.39 No 32 0.98 Yes 0 0 No -19 0.42 No 26 43.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68636806 + NM_133509 RAD51B 0 . . . 8.43 78.44 24 4.8 No 1 1.75 Yes 0 0 No -23 0.56 No 42 48.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29123617 - NM_001005735 CHEK2 0 . . . 2.22 72.71 20 3.57 No -1 1.29 Yes 0 0 No -57 0.61 No 48 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68541765 + NM_133509 RAD51B 0 . . . 5.71 71.93 20 5.1 No 10 0.53 No 0 0 No -55 0.47 No 48 89.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48021231 + NM_000179 MSH6 0 . . . 0.09 74.68 27 5.87 Yes 4 0.41 No 0 0 No -26 0.87 Yes 54 84.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131906589 + NM_005732 RAD50 0 . . . 4.57 76.1 16 5.83 Yes 47 1.82 Yes 0 0 No -15 0.29 No 48 83.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37043813 + NM_000249 MLH1 0 . . . 8.39 81.66 29 7.33 Yes 36 1.08 Yes 0 0 No -28 0.85 Yes 34 72.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69001083 + NM_133509 RAD51B 0 . . . 1.92 61.87 10 3.78 No 67 -6.12 No 0 0 No -36 0.89 Yes 46 80.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68798056 + NM_133509 RAD51B 0 . . . 1.78 76.63 25 5.1 No 64 -4.26 No 0 0 No -24 0.56 No 53 50.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94163278 - NM_005591 MRE11 0 . . . 4.23 67.82 46 6.38 Yes 17 0.21 No 0 0 No -45 0.59 No 41 94.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1206722 + NM_000455 STK11 0 . . . 4.36 76.44 54 7.39 Yes 53 1.11 Yes 0 0 No -26 0.62 No 51 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68424868 + NM_133509 RAD51B 0 . . . 5.32 73.09 15 5.36 No 49 0.97 Yes 0 0 No -28 0.32 No 41 86.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94202938 - NM_005591 MRE11 0 . . . 1.36 67.37 13 5.2 No 69 1.11 Yes 0 0 No -20 0.49 No 47 71.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68503221 + NM_133509 RAD51B 0 . . . 1 0 21 5.06 No 44 -3.38 No 0 0 No -20 0.81 Yes 52 68.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84400389 - NM_139076 FAM175A 0 . . . 1.75 80.12 9 3.87 No 70 0.34 No 0 0 No -30 0.66 No 46 65.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37040833 + NM_000249 MLH1 0 . . . 7.69 77.95 11 6.08 Yes 72 -1.86 No 0 0 No -30 0.74 Yes 46 69.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90998317 - NM_002485 NBN 0 . . . 2.88 66.1 32 6.81 Yes 55 1.59 Yes 0 0 No -31 0.73 Yes 29 73.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29090208 - NM_001005735 CHEK2 0 . . . 4.85 73.3 17 5.11 No 6 0.73 No 0 0 No -20 0.59 No 52 79.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190703736 + NM_000534 PMS1 0 . . . 2.42 83 17 5.66 Yes 11 0.94 Yes 0 0 No -27 0.39 No 44 57.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68384972 + NM_133509 RAD51B 0 . . . 1.52 83 19 5 No 12 0.63 No 0 0 No -18 0.67 Yes 46 72.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68748875 + NM_133509 RAD51B 0 . . . 4.83 80.99 26 6.48 Yes 3 1.65 Yes 0 0 No -21 0.77 Yes 47 69.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29139259 - NM_001005735 CHEK2 0 . . . 1 73.59 34 7.17 Yes 34 1.27 Yes 0 0 No -33 0.77 Yes 24 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131914196 + NM_005732 RAD50 0 . . . 1.49 77.66 19 4.82 No 47 1.12 Yes 0 0 No -38 0.69 Yes 48 70.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108104801 + NM_000051 ATM 0 . . . 6.59 84.86 22 4.57 No 3 0.94 Yes 0 0 No -22 0.57 No 47 61.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68642635 + NM_133509 RAD51B 0 . . . 3.88 74.44 47 7.11 Yes 70 1.17 Yes 0 0 No -21 0.29 No 38 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68427147 + NM_133509 RAD51B 0 . . . 0.43 0 35 5.96 Yes 37 1.03 Yes 0 0 No -22 0.67 Yes 42 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68917455 + NM_133509 RAD51B 0 . . . 4.16 74.78 54 7.38 Yes 43 1.2 Yes 0 0 No -30 0.32 No 40 71.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41002806 + NM_001164269 RAD51 0 . . . 9.98 87.28 14 3.31 No 27 0.01 No 0 0 No -20 0.73 Yes 31 39.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41256894 - NM_007294 BRCA1 0 . . . 1.43 0 38 6.03 Yes 19 0.14 No 0 0 No -33 0.9 Yes 35 57.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69084919 + NM_133509 RAD51B 0 . . . 7.88 89.92 18 5.74 Yes 32 0.89 Yes 0 0 No -26 0.63 No 50 66.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68846890 + NM_133509 RAD51B 0 . . . 2.32 72.23 13 4.24 No 65 0.21 No 0 0 No -20 0.3 No 51 83.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68852921 + NM_004360 CDH1 0 . . . 1.55 68.06 20 4.02 No 52 0.15 No 0 0 No -27 0.67 Yes 48 82.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68860973 + NM_133509 RAD51B 0 . . . 2.64 0 18 5.48 No 32 1.13 Yes 0 0 No -23 0.54 No 26 89.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69115975 + NM_133509 RAD51B 0 . . . 5.98 88.95 26 5.22 No 20 0.27 No 0 0 No -25 0.77 Yes 50 59.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59763934 - NM_032043 BRIP1 0 . . . 1.67 81.08 27 5.48 No 6 0.01 No 0 0 No -23 0.69 Yes 45 57.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215628895 - NM_000465 BARD1 0 . . . 5.5 83.29 14 5.09 No 42 -1.58 No 0 0 No -19 0.76 Yes 38 64.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47655784 + NM_000251 MSH2 0 . . . 5.74 86.26 19 4.57 No 42 0.41 No 0 0 No -55 0.77 Yes 48 90.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68290089 + NM_133509 RAD51B 0 . . . 3.15 59.75 21 6.08 Yes 26 0.64 No 0 0 No -24 0.61 No 32 78.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68675250 + NM_133509 RAD51B 0 . . . 6.53 90.97 21 5.1 No 13 1.17 Yes 0 0 No -20 0.73 Yes 45 74.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68396827 + NM_133509 RAD51B 0 . . . 0.61 75.48 23 4.86 No 43 0.03 No 0 0 No -22 0.72 Yes 23 91.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68608847 + NM_133509 RAD51B 0 . . . 2.75 74.1 26 5.1 No -1 0.76 No 0 0 No -25 0.87 Yes 49 48.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29102743 - NM_001005735 CHEK2 0 . . . 3.6 85.02 15 4.58 No 4 1.05 Yes 0 0 No -18 0.44 No 49 89.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45793681 - NM_001048171 MUTYH 0 . . . 3.35 66.75 30 5.54 No 76 -0.47 No 0 0 No -58 0.44 No 33 80.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108139930 + NM_000051 ATM 0 . . . 1.9 70.36 25 5.57 Yes 68 0.9 Yes 0 0 No -28 0.42 No 44 44.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90969145 - NM_002485 NBN 0 . . . 0.29 0 9 3.87 No 12 -2.34 No 0 0 No -30 0.38 No 52 45.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68640910 + NM_133509 RAD51B 0 . . . 4.72 76.65 20 7.14 Yes 63 0.06 No 0 0 No -19 0.58 No 48 60.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69136695 + NM_133509 RAD51B 0 . . . 0.39 59.56 13 4.9 No 33 0.85 Yes 0 0 No -17 0.34 No 19 84.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56803233 + NM_058216 RAD51C 0 . . . 1.88 63.48 26 5.66 Yes 46 0.64 No 0 0 No -54 0.64 No 53 64.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190697115 + NM_000534 PMS1 0 . . . 0.55 78.11 65 7.65 Yes 3 1.71 Yes 0 0 No -23 0.69 Yes 51 61.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33446329 - NM_002878 RAD51D 0 . . . 5.87 76.79 27 5.06 No 40 0.35 No 0 0 No -26 0.78 Yes 46 26.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32967929 + NM_000059 BRCA2 0 . . . 4.68 74.15 28 5.17 No -4 0.7 No 0 0 No -39 0.79 Yes 32 43.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59846448 - NM_032043 BRIP1 0 . . . 2.46 81.98 23 5.04 No 17 0.83 Yes 0 0 No -22 0.84 Yes 52 60.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84391646 - NM_139076 FAM175A 0 . . . 1.78 69.66 17 5.17 No 35 0.46 No 0 0 No -22 0.7 Yes 23 66.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23646945 - NM_024675 PALB2 0 . . . 1.02 67.05 10 3.87 No 22 1.1 Yes 0 0 No -38 0.23 No 47 70.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90945331 - NM_002485 NBN 0 . . . 1.94 63.63 26 7.86 Yes 58 0.83 Yes 0 0 No -25 0.56 No 53 69.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215658198 - NM_000465 BARD1 0 . . . 0.06 75.66 21 5.2 No 45 0.2 No 0 0 No -20 0.79 Yes 13 46.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108223755 + NM_000051 ATM 0 . . . 0.06 70.03 41 7.28 Yes 50 -3.6 No 0 0 No -30 0.67 Yes 30 47.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131914845 + NM_005732 RAD50 0 . . . 3.24 55.03 19 5 No 34 1.26 Yes 0 0 No -15 0.29 No 28 45.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47634882 + NM_000251 MSH2 0 . . . 1.02 64.2 25 5.16 No 48 -4.69 No 0 0 No -24 0.56 No 31 65.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071235 + NM_133509 RAD51B 0 . . . 2.42 78.99 21 5.1 No 24 1.66 Yes 0 0 No -45 0.44 No 53 60.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41258448 - NM_007294 BRCA1 0 . . . 2.08 63.11 26 6.08 Yes 49 0.51 No 0 0 No -23 0.69 Yes 37 75.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6047164 - NM_000535 PMS2 0 . . . 2.22 83.24 27 6.22 Yes 45 0.41 No 0 0 No -26 0.63 No 40 52.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190742046 + NM_000534 PMS1 0 . . . 1.63 67.61 74 8.22 Yes 54 1.15 Yes 0 0 No -21 0.81 Yes 38 41.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68561612 + NM_133509 RAD51B 0 . . . 4.65 76.08 26 4.68 No 0 0.86 Yes 0 0 No -25 0.93 Yes 50 62.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41241270 - NM_007294 BRCA1 0 . . . 3.09 74.4 26 8.3 Yes 70 1.23 Yes 0 0 No -25 0.74 Yes 43 46.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215607859 - NM_000465 BARD1 0 . . . 0.13 0 15 5.61 Yes 20 1.15 Yes 0 0 No -25 0.62 No 20 53.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59841612 - NM_032043 BRIP1 0 . . . 6.69 85.91 22 4.69 No 17 0.22 No 0 0 No -21 0.67 Yes 41 92.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90988468 - NM_002485 NBN 0 . . . 0.09 74.68 26 7.53 Yes 4 0.41 No 0 0 No -22 0.4 No 54 84.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108232103 + NM_000051 ATM 0 . . . 0.26 71.45 15 5.8 Yes 18 -2.57 No 0 0 No -41 0.29 No 49 47.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68617483 + NM_133509 RAD51B 0 . . . 2.93 0 12 4.73 No 22 1.52 Yes 0 0 No -20 0.31 No 29 32.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41209427 - NM_007294 BRCA1 0 . . . 1.25 84.22 22 6.85 Yes 33 1.04 Yes 0 0 No -21 0.96 Yes 46 70.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68319918 + NM_133509 RAD51B 0 . . . 3.38 85.33 13 4.36 No 45 -3.08 No 0 0 No -27 0.62 No 46 70.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75501763 - NM_001040108 MLH3 0 . . . 4.74 84.41 24 4.86 No 37 1.42 Yes 0 0 No -23 0.77 Yes 41 83.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131898791 + NM_005732 RAD50 0 . . . 0.88 70.29 26 5.38 No 61 -2.39 No 0 0 No -25 0.92 Yes 42 42.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69012238 + NM_133509 RAD51B 0 . . . 3.96 73.32 27 4.57 No -3 0.55 No 24 0.39 Yes -26 0.45 No 37 62.1 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr15 40995326 + NM_001164269 RAD51 0 . . . 1.72 78.73 34 6 Yes 32 0.7 No 0 0 No -33 0.93 Yes 53 42.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104182957 - NM_001100119 XRCC3 0 . . . 5.02 74.99 19 5.31 No -1 -0.63 No 0 0 No -22 0.75 Yes 43 36.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69050162 + NM_133509 RAD51B 0 . . . 2.69 59.38 26 5.77 Yes 33 -3.04 No 0 0 No -30 0.58 No 49 71.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47791654 + NM_000251 MSH2 0 . . . 2.04 59.07 24 5.88 Yes 37 -3.04 No 0 0 No -23 0.82 Yes 41 52.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215629267 - NM_000465 BARD1 0 . . . 8.57 77.28 22 4.69 No 18 0.78 Yes 0 0 No -21 0.71 Yes 40 96.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68846348 + NM_133509 RAD51B 0 . . . 0.66 65.04 24 5.29 No 72 -4.66 No 0 0 No -23 0.75 Yes 48 38.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68670240 + NM_133509 RAD51B 0 . . . 3.24 84.15 27 5.27 No 7 -1.85 No 0 0 No -50 0.59 No 51 84.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68323419 + NM_133509 RAD51B 0 . . . 4.18 84.15 35 6.4 Yes 16 1.39 Yes 0 0 No -25 0.42 No 42 72.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29084573 - NM_001005735 CHEK2 0 . . . 2.41 68.95 21 4.98 No 16 0.97 Yes 0 0 No -20 0.44 No 42 92.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68599726 + NM_133509 RAD51B 0 . . . 2.93 71.56 38 5.68 Yes 72 -1.37 No 0 0 No -26 0.6 No 41 80.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59812804 - NM_032043 BRIP1 0 . . . 1.58 68.3 14 4.31 No 49 0.69 No 0 0 No -28 0.63 No 39 93.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29100733 - NM_001005735 CHEK2 0 . . . 2.93 74.41 27 7 Yes 21 1.45 Yes 0 0 No -26 0.71 Yes 34 86.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84398669 - NM_139076 FAM175A 0 . . . 2.5 85.56 16 4.3 No 13 0.36 No 0 0 No -23 0.92 Yes 45 95.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33442011 - NM_002878 RAD51D 0 . . . 1.5 77.68 11 5.38 No 29 -3.06 No 0 0 No -23 0.5 No 49 65.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68361702 + NM_133509 RAD51B 0 . . . 2.18 82.27 19 5.9 Yes 33 1.06 Yes 0 0 No -18 0.41 No 20 60.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108200690 + NM_000051 ATM 0 . . . 6.09 76.37 30 6.4 Yes 29 0.45 No 0 0 No -29 0.92 Yes 42 91.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69075866 + NM_133509 RAD51B 0 . . . 6.29 80.53 23 5.05 No 58 1.31 Yes 0 0 No -22 0.7 Yes 34 49.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108201916 + NM_000051 ATM 0 . . . 2.57 61.66 16 6.24 Yes 30 0.5 No 0 0 No -23 0.82 Yes 28 66.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47701489 + NM_000251 MSH2 0 . . . 8.21 88.48 11 5.08 No 33 0.91 Yes 0 0 No -30 0.41 No 42 83.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190742763 + NM_000534 PMS1 0 . . . 6.86 90.14 24 6.11 Yes 11 0.17 No 0 0 No -24 0.66 No 26 75.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68928316 + NM_133509 RAD51B 0 . . . 4.17 82.5 28 5.45 No 32 0.93 Yes 0 0 No -27 0.73 Yes 26 62.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68331328 + NM_133509 RAD51B 0 . . . 1.31 72.42 39 7.68 Yes 20 1.22 Yes 0 0 No -24 0.62 No 45 75.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68515588 + NM_133509 RAD51B 0 . . . 1.82 72.54 25 5.96 Yes 23 0.87 Yes 0 0 No -33 0.47 No 35 65.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68848468 + NM_133509 RAD51B 0 . . . 5.03 79 21 5.96 Yes 8 1.92 Yes 0 0 No -26 0.9 Yes 50 93.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152358648 - NM_005431 XRCC2 0 . . . 7.08 91.08 22 6.56 Yes 55 1.18 Yes 0 0 No -21 0.71 Yes 33 58.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68292548 + NM_133509 RAD51B 0 . . . 3.37 68.95 13 4.24 No 16 1.11 Yes 0 0 No -18 0.58 No 42 96.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59887402 - NM_032043 BRIP1 0 . . . 1.69 84.48 35 4.27 No 26 1.95 Yes 0 0 No -28 0.5 No 51 55.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105178774 + NM_021930 RINT1 0 . . . 1.09 0 26 4.8 No 9 -2.4 No 0 0 No -26 0.6 No 52 35.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68770445 + NM_133509 RAD51B 0 . . . 5.45 82.84 49 7.15 Yes 54 0.3 No 0 0 No -39 0.35 No 47 85.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29081750 - NM_001005735 CHEK2 0 . . . 7.35 83.79 33 5.71 Yes 61 1.44 Yes 0 0 No -23 0.47 No 45 74.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68522390 + NM_133509 RAD51B 0 . . . 2.85 70.15 27 5.85 Yes 61 -5.04 No 0 0 No -26 0.9 Yes 45 94.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68584724 + NM_133509 RAD51B 0 . . . 3.3 70.41 19 6.5 Yes 54 0.4 No 0 0 No -29 0.75 Yes 47 58.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41000956 + NM_001164269 RAD51 0 . . . 4.1 78.29 28 6.16 Yes 51 1.72 Yes 0 0 No -33 0.47 No 49 36.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21974900 - NM_000077 CDKN2A 0 . . . 0.11 72.86 30 5.66 Yes 59 -1.53 No 22 0.6 Yes -30 0.52 No 55 27.8 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 59804284 - NM_032043 BRIP1 0 . . . 1.06 62.57 94 9.03 Yes 66 0.26 No 0 0 No -23 0.71 Yes 35 86.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68793034 + NM_004360 CDH1 0 . . . 1.1 58.08 18 4.9 No 9 0.37 No 0 0 No -56 0.31 No 40 53.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68655702 + NM_133509 RAD51B 0 . . . 11.45 80.03 23 5.92 Yes 37 0.19 No 0 0 No -22 0.83 Yes 46 58.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68773319 + NM_133509 RAD51B 0 . . . 0.48 65.99 19 5.14 No 29 1.1 Yes 0 0 No -19 0.73 Yes 46 64.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56786192 + NM_058216 RAD51C 0 . . . 3.61 68.34 18 4.9 No 21 1.71 Yes 0 0 No -36 0.51 No 37 67.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68831463 + NM_004360 CDH1 0 . . . 4.49 69.96 24 4.89 No 25 -2.26 No 0 0 No -23 0.95 Yes 43 61.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47658792 + NM_000251 MSH2 0 . . . 0.86 68.77 18 5.94 Yes 28 0.29 No 0 0 No -24 0.65 No 39 81.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89715582 + NM_000314 PTEN 0 . . . 2 72.45 21 5.2 No 73 -3.59 No 0 0 No -20 0.8 Yes 42 64.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108224694 + NM_000051 ATM 0 . . . 3.24 74.23 13 5 No 45 0.31 No 0 0 No -22 0.5 No 33 86.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37070140 + NM_000249 MLH1 0 . . . 4.51 79.07 24 5.48 No 9 1.54 Yes 0 0 No -23 0.52 No 49 84.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33441350 - NM_002878 RAD51D 0 . . . 2.58 72.68 16 4.76 No 40 -3.25 No 0 0 No -28 0.91 Yes 45 56.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105202624 + NM_021930 RINT1 0 . . . 7.15 91.3 20 4.82 No 53 0.77 No 0 0 No -19 0.2 No 47 54.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89668923 + NM_000314 PTEN 0 . . . 2.39 74.73 26 5.91 Yes 52 0.06 No 0 0 No -25 0.86 Yes 33 53.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21979800 - NM_000077 CDKN2A 0 . . . 6.21 81.16 24 5.18 No 2 0.63 No 0 0 No -24 0.76 Yes 32 80.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152360531 - NM_005431 XRCC2 0 . . . 3.85 80.07 23 6.24 Yes 5 0.18 No 0 0 No -22 0.66 No 46 64.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89651417 + NM_000314 PTEN 0 . . . 0.68 52.08 22 5.74 Yes 13 0.27 No 0 0 No -21 0.74 Yes 39 60.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90992649 - NM_002485 NBN 0 . . . 0.87 0 17 5.28 No 20 0.48 No 0 0 No -22 0.86 Yes 38 86.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59902741 - NM_032043 BRIP1 0 . . . 10.54 90.29 26 5 No 36 1.22 Yes 0 0 No -25 0.75 Yes 37 65.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47766606 + NM_000251 MSH2 0 . . . 3.04 73.96 22 4.9 No 72 -6 No 0 0 No -21 0.73 Yes 45 35.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69101675 + NM_133509 RAD51B 0 . . . 0.67 65.36 21 5.02 No 36 1.28 Yes 0 0 No -20 0.52 No 44 53.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94228506 - NM_005591 MRE11 0 . . . 2.19 77.34 27 4.5 No 20 0.96 Yes 0 0 No -26 0.81 Yes 38 61.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68300854 + NM_133509 RAD51B 0 . . . 10.03 86.52 15 4.58 No 10 0.04 No 0 0 No -32 0.43 No 48 66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47648028 + NM_000251 MSH2 0 . . . 5.04 83.53 23 3.88 No 11 2.21 Yes 0 0 No -22 0.64 No 40 87.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84405057 - NM_139076 FAM175A 0 . . . 3.38 62.04 38 6.56 Yes 67 -5.77 No 0 0 No -37 0.83 Yes 48 80.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41234033 - NM_007294 BRCA1 0 . . . 0.54 63.05 23 6.38 Yes 26 0.52 No 0 0 No -22 0.9 Yes 45 65.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69068420 + NM_133509 RAD51B 0 . . . 2.61 73.04 23 6.84 Yes 45 1.16 Yes 0 0 No -22 0.5 No 29 87.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1229405 + NM_000455 STK11 0 . . . 0.29 74.77 32 5.64 Yes 23 -1.08 No 0 0 No -53 0.39 No 50 17.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68794558 + NM_133509 RAD51B 0 . . . 2.05 69.31 17 5.83 Yes 74 -6.2 No 0 0 No -16 0.31 No 47 55.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190719309 + NM_000534 PMS1 0 . . . 3.25 0 19 6.24 Yes 66 -5.51 No 0 0 No -35 0.56 No 56 39.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68612693 + NM_133509 RAD51B 0 . . . 2.17 69.32 20 4.9 No 52 0.01 No 0 0 No -19 0.9 Yes 49 87.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37038247 + NM_000249 MLH1 0 . . . 1.29 65.22 18 4.9 No 64 -3.46 No 0 0 No -49 0.71 Yes 42 62.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68819127 + NM_133509 RAD51B 0 . . . 7.37 75.51 25 5.74 Yes 62 1.68 Yes 0 0 No -24 0.56 No 44 94.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1225905 + NM_000455 STK11 0 . . . 5.14 79.09 18 5.45 No 43 -0.5 No 0 0 No -17 0.44 No 44 69.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6011799 - NM_000535 PMS2 0 . . . 5.65 79.8 30 5.57 Yes 53 -2.09 No 0 0 No -54 0.23 No 45 77.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33432619 - NM_002878 RAD51D 0 . . . 2.2 62.69 20 5.1 No 24 -2.34 No 0 0 No -35 0.21 No 50 62.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90975734 - NM_002485 NBN 0 . . . 0.94 83.07 34 5.47 No 30 0.41 No 0 0 No -33 0.34 No 38 62.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47660351 + NM_000251 MSH2 0 . . . 5.14 85.18 22 4.68 No 51 2.25 Yes 0 0 No -25 0.14 No 46 64.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23624801 - NM_024675 PALB2 0 . . . 3.6 85.02 19 4.99 No 4 1.2 Yes 0 0 No -57 0.72 Yes 43 54.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68407129 + NM_133509 RAD51B 0 . . . 1.5 0 18 5.82 Yes 12 0.84 Yes 0 0 No -27 0.9 Yes 54 49.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68491711 + NM_133509 RAD51B 0 . . . 5.16 70.81 23 5.37 No 28 0.84 Yes 0 0 No -22 0.78 Yes 36 84.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59798996 - NM_032043 BRIP1 0 . . . 2.23 0 38 6.31 Yes 2 0.34 No 0 0 No -37 0.71 Yes 49 70.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68588175 + NM_133509 RAD51B 0 . . . 7.62 75.02 30 4.19 No 8 1.27 Yes 0 0 No -25 0.64 No 27 52.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108179145 + NM_000051 ATM 0 . . . 4.05 84.03 27 5.26 No 43 0.63 No 0 0 No -26 0.42 No 43 55.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69061841 + NM_133509 RAD51B 0 . . . 0.27 65.98 42 6.63 Yes 44 1.02 Yes 0 0 No -42 0.53 No 48 47.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68589749 + NM_133509 RAD51B 0 . . . 2.68 0 59 7.3 Yes 13 0.13 No 0 0 No -29 0.73 Yes 45 63.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152359006 - NM_005431 XRCC2 0 . . . 2.65 80.25 29 6.4 Yes 8 0.41 No 0 0 No -28 0.94 Yes 50 59.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89716093 + NM_000314 PTEN 0 . . . 5.7 73.97 33 5.75 Yes 10 0.86 Yes 0 0 No -32 0.61 No 48 58.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68708374 + NM_133509 RAD51B 0 . . . 6.15 71.13 68 5.48 No 21 0.57 No 0 0 No -25 0.76 Yes 37 73.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68343920 + NM_133509 RAD51B 0 . . . 3.38 69.76 17 6.92 Yes 4 0.42 No 0 0 No -27 0.61 No 39 51.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48032873 + NM_000179 MSH6 0 . . . 4.39 79.3 9 3.87 No 4 0.85 Yes 0 0 No -23 0.68 Yes 48 65.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89693719 + NM_000314 PTEN 0 . . . 2.49 80.58 31 6 Yes 24 0.57 No 0 0 No -30 0.92 Yes 44 77.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59833277 - NM_032043 BRIP1 0 . . . 3.51 0 16 5.39 No 23 0.53 No 0 0 No -15 0.58 No 35 80.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90962894 - NM_002485 NBN 0 . . . 7.39 75.51 12 4.24 No 18 0.13 No 0 0 No -58 0.63 No 40 41.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190682234 + NM_000534 PMS1 0 . . . 2.3 0 17 5.2 No 16 0.53 No 0 0 No -25 0.42 No 42 71.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94169154 - NM_005591 MRE11 0 . . . 2.03 66.03 16 4.67 No 37 0.49 No 0 0 No -19 0.88 Yes 21 76.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68354345 + NM_133509 RAD51B 0 . . . 4.87 0 36 5.84 Yes 34 -1.54 No 0 0 No -15 0.39 No 38 68.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108129284 + NM_000051 ATM 0 . . . 9.61 92.22 12 5.2 No 8 0.79 Yes 0 0 No -25 0.42 No 40 73.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68992057 + NM_133509 RAD51B 0 . . . 4.83 90.91 24 5.29 No 25 -2.23 No 0 0 No -26 0.63 No 48 83.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131912389 + NM_005732 RAD50 0 . . . 9.7 81.35 16 4.8 No 57 0.78 Yes 0 0 No -24 0.44 No 44 90.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89728336 + NM_000314 PTEN 0 . . . 1.2 0 27 5 No 3 1.43 Yes 0 0 No -26 0.62 No 49 46.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68983913 + NM_133509 RAD51B 0 . . . 2.47 76.37 30 5.15 No 62 1.28 Yes 0 0 No -27 0.57 No 40 67.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56783013 + NM_058216 RAD51C 0 . . . 6.61 85.58 15 3.99 No 12 1.81 Yes 0 0 No -28 0.21 No 46 88.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1212646 + NM_000455 STK11 0 . . . 0.41 63.93 13 5.2 No -4 0.7 No 0 0 No -25 0.75 Yes 49 44.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41278162 - NM_007294 BRCA1 0 . . . 6.08 87.09 9 5.1 No 73 -3.09 No 0 0 No -29 0.42 No 49 69.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6037251 - NM_000535 PMS2 0 . . . 1.57 80.61 24 4.43 No -3 0.04 No 0 0 No -51 0.39 No 52 40.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69139812 + NM_133509 RAD51B 0 . . . 1.75 61.1 19 4.38 No 71 -4.81 No 0 0 No -25 0.6 No 48 69.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48031847 + NM_000179 MSH6 0 . . . 1.45 0 36 5.91 Yes 4 1.59 Yes 0 0 No -28 0.33 No 43 53.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56803994 + NM_058216 RAD51C 0 . . . 2.84 69.72 14 5.38 No NA NA NA 0 0 No -31 0.38 No 38 38.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94188622 - NM_005591 MRE11 0 . . . 3.77 69.5 17 4.86 No 51 0.62 No 0 0 No -22 0.92 Yes 44 70.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108233907 + NM_000051 ATM 0 . . . 0.34 73.3 32 5.28 No 32 0.69 No 0 0 No -31 0.57 No 52 48.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69024198 + NM_133509 RAD51B 0 . . . 0.45 0 19 4.99 No 53 -5.25 No 0 0 No -22 0.51 No 44 69.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89731097 + NM_000314 PTEN 0 . . . 1.76 0 25 5 No 65 1 Yes 0 0 No -24 0.79 Yes 52 79.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68942245 + NM_133509 RAD51B 0 . . . 2.65 0 15 4.94 No 51 -1.48 No 0 0 No -42 0.38 No 25 37.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108177971 + NM_000051 ATM 0 . . . 6.71 87.54 30 6.82 Yes 9 1.12 Yes 0 0 No -29 0.94 Yes 49 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215620880 - NM_000465 BARD1 0 . . . 3.73 72.99 24 6.16 Yes 62 -4.29 No 0 0 No -23 0.9 Yes 49 25.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215610140 - NM_000465 BARD1 0 . . . 4.07 71.4 35 7.37 Yes 42 1.1 Yes 0 0 No -28 0.56 No 47 79.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37037758 + NM_000249 MLH1 0 . . . 0.93 70.58 19 4.44 No 0 1.06 Yes 0 0 No -37 0.79 Yes 54 50.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52436622 - NM_004656 BAP1 0 . . . 5.44 77.77 23 4.9 No 23 0.46 No 0 0 No -22 0.75 Yes 40 89.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59931517 - NM_032043 BRIP1 0 . . . 0.46 67.74 15 5.04 No 9 1.46 Yes 0 0 No -23 0.37 No 49 87.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68804908 + NM_133509 RAD51B 0 . . . 4.45 68.12 27 5.05 No -3 0.26 No 0 0 No -26 0.71 Yes 45 73.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56770428 + NM_058216 RAD51C 0 . . . 5.41 67.59 25 6.61 Yes 62 1.45 Yes 0 0 No -29 0.65 No 44 78.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59864053 - NM_032043 BRIP1 0 . . . 1.54 66.63 32 5.66 Yes 73 -5.92 No 0 0 No -26 0.42 No 48 45.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68883950 + NM_133509 RAD51B 0 . . . 9.32 90.05 28 5.07 No 62 1.56 Yes 0 0 No -56 0.54 No 44 84.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68902428 + NM_133509 RAD51B 0 . . . 2.77 74.54 18 4.17 No 23 1.49 Yes 0 0 No -25 0.42 No 35 87.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37090924 + NM_000249 MLH1 0 . . . 9.71 90.45 44 5.38 No 68 1.27 Yes 0 0 No -31 0.58 No 46 52.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69124108 + NM_133509 RAD51B 0 . . . 2.98 77.45 25 5.56 Yes 62 0.88 Yes 0 0 No -30 0.51 No 42 40.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6031089 - NM_000535 PMS2 0 . . . 1.72 67.21 38 5.48 No 10 0.49 No 0 0 No -33 0.66 No 48 39.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47716444 + NM_000251 MSH2 0 . . . 5.31 84.22 36 5.84 Yes 76 -4.76 No 0 0 No -25 0.62 No 43 59.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68690192 + NM_133509 RAD51B 0 . . . 0.04 0 17 5.57 Yes 64 0.42 No 0 0 No -17 0.34 No 54 56.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68516805 + NM_133509 RAD51B 0 . . . 2.85 78.9 17 4.58 No 30 1.16 Yes 0 0 No -45 0.48 No 28 90.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68964309 + NM_133509 RAD51B 0 . . . 1.98 63.59 11 5.48 No 68 0.78 Yes 0 0 No -23 0.63 No 45 30.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68894361 + NM_133509 RAD51B 0 . . . 7.56 86 25 6.79 Yes 6 0.62 No 0 0 No -24 0.77 Yes 52 54.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68491352 + NM_133509 RAD51B 0 . . . 3.65 79.93 33 5.96 Yes 59 0.68 No 0 0 No -32 0.77 Yes 38 41.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41261622 - NM_007294 BRCA1 0 . . . 0.15 77.73 46 6.9 Yes 35 0.2 No 0 0 No -27 0.87 Yes 46 62.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215675954 - NM_000465 BARD1 0 . . . 6.77 80.14 22 4.8 No 17 0.09 No 0 0 No -22 0.83 Yes 41 71.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21986800 - NM_000077 CDKN2A 0 . . . 1.14 61.84 18 4.9 No 72 1.45 Yes 0 0 No -25 0.48 No 29 42.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108240519 + NM_000051 ATM 0 . . . 0.17 68.79 44 7.16 Yes 10 0.89 Yes 0 0 No -27 0.52 No 48 63.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47793668 + NM_000251 MSH2 0 . . . 1.69 74 17 4.58 No 36 1.03 Yes 0 0 No -16 0.69 Yes 51 44.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23613388 - NM_024675 PALB2 0 . . . 1.25 63.8 16 5.38 No 56 1.22 Yes 0 0 No -55 0.28 No 43 57.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32929602 + NM_000059 BRCA2 0 . . . 7.56 81.11 22 3.8 No 3 1.69 Yes 0 0 No -21 0.95 Yes 45 45.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59785760 - NM_032043 BRIP1 0 . . . 0.73 61.68 18 5.26 No 54 -1.22 No 0 0 No -17 0.39 No 36 59.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108160770 + NM_000051 ATM 0 . . . 8.8 86.16 24 5.92 Yes 12 1.78 Yes 0 0 No -23 0.61 No 46 83.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52435768 - NM_004656 BAP1 0 . . . 3.97 73.85 22 4.55 No NA NA NA 0 0 No -21 0.84 Yes 51 66.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68627049 + NM_133509 RAD51B 0 . . . 1.88 67.19 18 4.69 No 49 -4.72 No 0 0 No -27 0.46 No 53 65.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21980498 - NM_000077 CDKN2A 0 . . . 4.67 77.67 19 4.69 No 5 1.18 Yes 0 0 No -18 0.83 Yes 44 93.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215617347 - NM_000465 BARD1 0 . . . 3.98 76.13 17 5.74 Yes 20 0.63 No 0 0 No -17 0.23 No 42 80.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59837146 - NM_032043 BRIP1 0 . . . 1.91 0 17 5.74 Yes 19 1.36 Yes 0 0 No -26 0.69 Yes 39 95.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94157847 - NM_005591 MRE11 0 . . . 4.17 69.78 42 6.63 Yes 55 0.82 Yes 0 0 No -41 0.85 Yes 38 59.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6013860 - NM_000535 PMS2 0 . . . 0.54 78.54 26 5.29 No 29 0.29 No 0 0 No -25 0.94 Yes 41 93.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41222575 - NM_007294 BRCA1 0 . . . 0.28 68.82 29 5.57 Yes 43 -1.24 No 0 0 No -28 0.86 Yes 51 79.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90957364 - NM_002485 NBN 0 . . . 2.63 81.66 20 4.32 No 64 0.48 No 0 0 No -47 0.71 Yes 52 68.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68775409 + NM_004360 CDH1 0 . . . 8.87 94.59 22 7.52 Yes 3 0.51 No 0 0 No -31 0.53 No 46 47.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59915564 - NM_032043 BRIP1 0 . . . 5.05 74 22 4.68 No 45 0.98 Yes 0 0 No -25 0.66 No 43 54.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68923130 + NM_133509 RAD51B 0 . . . 2.99 70.59 13 4.9 No 42 -3.77 No 0 0 No -19 0.63 No 47 28.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29092408 - NM_001005735 CHEK2 0 . . . 0.09 76.63 15 5.32 No 58 -3.78 No 0 0 No -28 0.46 No 48 81.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75497889 - NM_001040108 MLH3 0 . . . 10.9 81.49 41 6.85 Yes 27 -3.01 No 0 0 No -40 0.73 Yes 41 38.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47666596 + NM_000251 MSH2 0 . . . 1.27 76.63 34 8.04 Yes 40 -2.85 No 0 0 No -33 0.7 Yes 43 54.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68342756 + NM_133509 RAD51B 0 . . . 6.91 75.94 46 6.81 Yes 70 0.58 No 0 0 No -36 0.67 Yes 44 76.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131896831 + NM_005732 RAD50 0 . . . 3.57 72.21 17 4.24 No 73 1.26 Yes 0 0 No -16 0.53 No 26 43.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6016720 - NM_000535 PMS2 0 . . . 0.63 64.93 42 6.31 Yes 70 -4.65 No 0 0 No -30 0.53 No 41 66.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69110505 + NM_133509 RAD51B 0 . . . 3.97 74.13 47 5.99 Yes 71 0.02 No 0 0 No -29 0.72 Yes 10 58.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68858543 + NM_004360 CDH1 0 . . . 0.94 66.36 20 4.8 No -4 0.29 No 0 0 No -50 0.57 No 58 43.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32964119 + NM_000059 BRCA2 0 . . . 6.53 74.36 32 6.15 Yes 5 1.34 Yes 0 0 No -31 0.82 Yes 53 59.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59941274 - NM_032043 BRIP1 0 . . . 0.42 63.22 21 3.85 No 16 1.12 Yes 0 0 No -20 0.9 Yes 42 61.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32911261 + NM_000059 BRCA2 0 . . . 1.81 69.07 16 4.26 No 59 0.83 Yes 0 0 No -33 0.57 No 43 83.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29097756 - NM_001005735 CHEK2 0 . . . 7.62 92.84 11 5.1 No 35 0.82 Yes 0 0 No -23 0.71 Yes 49 76.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59783350 - NM_032043 BRIP1 0 . . . 5.71 78.78 13 5.09 No 71 -5.59 No 0 0 No -21 0.9 Yes 50 66.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59839271 - NM_032043 BRIP1 0 . . . 5.02 69.18 13 4.36 No 65 1.47 Yes 0 0 No -55 0.6 No 35 65.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75488131 - NM_001040108 MLH3 0 . . . 2.88 0 28 4.77 No 35 0.65 No 0 0 No -27 0.71 Yes 51 47.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108235415 + NM_000051 ATM 0 . . . 4.98 80.74 21 4.38 No 55 -3.26 No 0 0 No -20 0.58 No 46 46.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68382795 + NM_133509 RAD51B 0 . . . 1.32 75.03 26 5.95 Yes 75 -2.87 No 0 0 No -25 0.92 Yes 53 47.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997567 + NM_001164269 RAD51 0 . . . 2.41 61.97 17 5.06 No 53 0.94 Yes 0 0 No -16 0.66 No 51 62.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89729900 + NM_000314 PTEN 0 . . . 6.71 73.39 23 4.15 No 63 1.33 Yes 0 0 No -22 0.92 Yes 36 61.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215591813 - NM_000465 BARD1 0 . . . 5.94 81.71 25 5.57 Yes 18 1.47 Yes 0 0 No -24 0.38 No 44 65.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131892633 + NM_005732 RAD50 0 . . . 4.46 75.96 31 5.65 Yes 7 -0.29 No 0 0 No -30 0.78 Yes 51 42.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68532145 + NM_133509 RAD51B 0 . . . 7.84 83.01 20 4.62 No 46 0.5 No 0 0 No -19 0.96 Yes 24 66.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1228778 + NM_000455 STK11 0 . . . 1.93 70.97 19 5 No 58 -0.78 No 0 0 No -18 0.43 No 46 14.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108124366 + NM_000051 ATM 0 . . . 2.28 73.09 19 5.47 No 53 1.49 Yes 0 0 No -26 0.74 Yes 42 21.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94199610 - NM_005591 MRE11 0 . . . 2.28 75.24 33 4.82 No 19 0.02 No 0 0 No -32 0.44 No 48 48.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23630231 - NM_024675 PALB2 0 . . . 2.18 79.97 29 5.74 Yes 13 0.66 No 0 0 No -28 0.28 No 45 37.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33436017 - NM_002878 RAD51D 0 . . . 2.98 80.86 15 4.47 No 36 -2.6 No 0 0 No -38 0.57 No 36 44.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68418530 + NM_133509 RAD51B 0 . . . 1.82 67.94 22 4.97 No 72 0.05 No 0 0 No -23 0.4 No 43 76.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47644072 + NM_000251 MSH2 0 . . . 1.63 61.1 24 5.02 No 12 0.51 No 0 0 No -24 0.71 Yes 46 43.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68679852 + NM_133509 RAD51B 0 . . . 0.6 67.6 46 7.21 Yes 58 1.2 Yes 0 0 No -20 0.53 No 37 75.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41201799 - NM_007294 BRCA1 0 . . . 5.57 95.5 58 7.55 Yes -3 0.3 No 0 0 No -26 0.8 Yes 47 72.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108181955 + NM_000051 ATM 0 . . . 0.24 80.65 17 6.78 Yes 74 0.41 No 0 0 No -16 0.69 Yes 50 60.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47679676 + NM_000251 MSH2 0 . . . 2.02 73.17 25 4.55 No 72 0.63 No 0 0 No -27 0.72 Yes 43 45.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41207446 - NM_007294 BRCA1 0 . . . 5.04 81.87 19 4.8 No 4 0.94 Yes 0 0 No -18 0.93 Yes 54 49.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41240592 - NM_007294 BRCA1 0 . . . 3.55 72.05 19 5.69 Yes 21 1.17 Yes 0 0 No -21 0.92 Yes 45 94.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68827102 + NM_004360 CDH1 0 . . . 2.22 72.7 21 5.66 Yes -2 0.54 No 0 0 No -20 0.67 Yes 33 65.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56768426 + NM_058216 RAD51C 0 . . . 0.23 70.67 21 6.32 Yes 34 1.19 Yes 0 0 No -25 0.44 No 46 36.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68930948 + NM_133509 RAD51B 0 . . . 7.82 77.05 24 5.59 Yes 24 1.29 Yes 0 0 No -23 0.92 Yes 34 58.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68830164 + NM_133509 RAD51B 0 . . . 9.37 92.6 58 6.87 Yes 10 0.45 No 0 0 No -38 0.66 Yes 48 67.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68646548 + NM_133509 RAD51B 0 . . . 6.75 89.54 20 9.36 Yes 65 -6.49 No 0 0 No -19 0.83 Yes 50 69.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68667871 + NM_133509 RAD51B 0 . . . 2.27 65.64 28 5.38 No 45 0.69 No 0 0 No -27 0.77 Yes 52 37.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41011720 + NM_001164269 RAD51 0 . . . 2.43 74.34 24 5.13 No 66 -6.35 No 0 0 No -23 0.65 No 34 48.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47655590 + NM_000251 MSH2 0 . . . 4.41 79.82 28 5.27 No 7 0.42 No 0 0 No -27 0.62 No 44 94.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131982231 + NM_005732 RAD50 0 . . . 2.11 72.55 69 7 Yes 15 1.63 Yes 0 0 No -30 0.55 No 43 92.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40990862 + NM_001164269 RAD51 0 . . . 2.99 76.51 25 6.83 Yes 70 0.28 No 0 0 No -24 0.53 No 42 25.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68934133 + NM_133509 RAD51B 0 . . . 8.41 77.02 30 4.4 No 62 1.24 Yes 0 0 No -25 0.38 No 45 61.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69029775 + NM_133509 RAD51B 0 . . . 2.31 0 15 5.1 No 11 1.43 Yes 0 0 No -20 0.7 Yes 47 89.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47788216 + NM_000251 MSH2 0 . . . 2.75 73.16 15 4.91 No 30 0.35 No 0 0 No -22 0.69 Yes 45 46.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68390200 + NM_133509 RAD51B 0 . . . 1.87 80.12 21 5.2 No 6 1.13 Yes 0 0 No -27 0.54 No 52 69.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104173512 - NM_001100119 XRCC3 0 . . . 4.22 78.37 33 4.93 No 49 1.84 Yes 0 0 No -32 0.43 No 44 24.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131944619 + NM_005732 RAD50 0 . . . 3.33 70.96 21 6.62 Yes 21 0.32 No 0 0 No -20 0.38 No 37 79.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152369249 - NM_005431 XRCC2 0 . . . 1.86 67.71 10 4 No 11 0.32 No 0 0 No -36 0.59 No 33 53.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40988518 + NM_001164269 RAD51 0 . . . 6.45 75.69 40 4.94 No -2 0.7 No 0 0 No -26 0.85 Yes 43 55.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68600564 + NM_133509 RAD51B 0 . . . 1.83 76.67 28 4.44 No 57 0.72 No 0 0 No -27 0.89 Yes 33 60.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6026936 - NM_000535 PMS2 0 . . . 1.74 67.87 22 6.03 Yes 1 0.63 No 0 0 No -29 0.52 No 53 37.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215657676 - NM_000465 BARD1 0 . . . 1.95 67.96 18 5.48 No 3 0.78 Yes 0 0 No -25 0.61 No 42 40.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68829609 + NM_004360 CDH1 0 . . . 1.11 74.76 27 5.2 No 34 1.18 Yes 0 0 No -26 0.69 Yes 24 62.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47683996 + NM_000251 MSH2 0 . . . 8.25 80.64 24 5.74 Yes 13 0.84 Yes 0 0 No -23 0.77 Yes 45 92.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152371479 - NM_005431 XRCC2 0 . . . 6.45 82.31 26 5.55 No 58 1.61 Yes 0 0 No -24 0.54 No 48 52.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68450995 + NM_133509 RAD51B 0 . . . 0.92 75.78 12 4.81 No 56 -2.08 No 0 0 No -21 0.64 No 46 59.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94195515 - NM_005591 MRE11 0 . . . 1.53 74.35 27 5.72 Yes 47 -3.82 No 0 0 No -29 0.65 No 43 62.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68798919 + NM_133509 RAD51B 0 . . . 8.41 89.26 28 5.24 No 49 1.36 Yes 0 0 No -34 0.47 No 40 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68285387 + NM_133509 RAD51B 0 . . . 1.86 66.64 39 7.57 Yes 51 -2.26 No 0 0 No -38 0.74 Yes 47 39.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47697767 + NM_000251 MSH2 0 . . . 0.73 85.89 16 5.19 No 27 0.8 Yes 0 0 No -21 0.6 No 44 75.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68982858 + NM_133509 RAD51B 0 . . . 4.77 76.53 16 3.86 No 5 0.28 No 0 0 No -38 0.61 No 48 90.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108235018 + NM_000051 ATM 0 . . . 4.71 70.15 25 5.1 No 19 0.09 No 0 0 No -24 0.82 Yes 39 64.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68358450 + NM_133509 RAD51B 0 . . . 3.78 72.71 29 4.48 No 44 0.46 No 0 0 No -28 0.96 Yes 46 93.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215601230 - NM_000465 BARD1 0 . . . 1.9 81.92 36 5.23 No 75 -4.47 No 0 0 No -25 0.78 Yes 46 53.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131980725 + NM_005732 RAD50 0 . . . 5.11 82.04 21 7.94 Yes 13 0.89 Yes 0 0 No -24 0.65 No 45 84.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69116315 + NM_133509 RAD51B 0 . . . 6.29 72.76 17 4.8 No 13 0.79 Yes 0 0 No -20 0.61 No 45 59.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68867917 + NM_133509 RAD51B 0 . . . 4.07 0 25 6 Yes 55 0.94 Yes 0 0 No -24 0.61 No 55 73.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6019924 - NM_000535 PMS2 0 . . . 5.95 74.67 36 4.96 No -2 0.89 Yes 0 0 No -25 0.6 No 45 72.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21987362 - NM_000077 CDKN2A 0 . . . 7.7 83.68 22 6 Yes 18 0.28 No 0 0 No -21 0.94 Yes 40 61.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47760413 + NM_000251 MSH2 0 . . . 2.95 70.85 26 6.38 Yes 23 1.58 Yes 0 0 No -28 0.55 No 35 61.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131977389 + NM_005732 RAD50 0 . . . 0.51 69.31 36 4.36 No 38 0.54 No 0 0 No -26 0.67 Yes 56 35.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47769119 + NM_000251 MSH2 0 . . . 6.6 83.18 26 5 No 4 1.01 Yes 0 0 No -28 0.44 No 44 72.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59822625 - NM_032043 BRIP1 0 . . . 1.08 60.74 28 6.36 Yes 40 1.18 Yes 0 0 No -22 0.81 Yes 40 31.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190743020 + NM_000534 PMS1 0 . . . 2.52 63.89 23 3.99 No 64 1.54 Yes 0 0 No -26 0.6 No 55 30.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68877383 + NM_133509 RAD51B 0 . . . 1.29 82.07 26 5.19 No 75 -5.78 No 0 0 No -43 0.48 No 53 52.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68338635 + NM_133509 RAD51B 0 . . . 3.89 67.34 33 3.85 No 64 -5.24 No 0 0 No -22 0.51 No 45 90.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68477873 + NM_133509 RAD51B 0 . . . 2.3 0 17 4.8 No 13 1.15 Yes 0 0 No -16 0.48 No 45 84.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105204653 + NM_021930 RINT1 0 . . . 3.1 81.4 28 5.78 Yes 3 1.49 Yes 0 0 No -25 0.33 No 50 61.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69146474 + NM_133509 RAD51B 0 . . . 11.79 93.47 19 4.93 No 18 1.73 Yes 0 0 No -18 0.78 Yes 40 83.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7575376 - NM_000546 TP53 0 . . . 1.22 0 32 5.65 Yes 7 1.47 Yes 0 0 No -27 0.81 Yes 19 45.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69047152 + NM_133509 RAD51B 0 . . . 3.29 66.62 21 4.78 No 44 0.82 Yes 0 0 No -20 0.75 Yes 45 66.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68649346 + NM_133509 RAD51B 0 . . . 0.51 73.73 22 5.1 No 70 -1 No 0 0 No -26 0.78 Yes 43 46.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69100315 + NM_133509 RAD51B 0 . . . 2.11 85.48 21 6.63 Yes 61 0.05 No 0 0 No -20 0.66 No 55 44.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108157474 + NM_000051 ATM 0 . . . 7.09 86.8 53 8.17 Yes 10 1.26 Yes 0 0 No -23 0.71 Yes 48 94.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48009843 + NM_000179 MSH6 0 . . . 2.41 81.52 16 5.09 No 42 1.64 Yes 0 0 No -21 0.6 No 20 74.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68794224 + NM_004360 CDH1 0 . . . 2.2 72.26 26 5.66 Yes 44 1.46 Yes 0 0 No -25 0.94 Yes 14 94.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190694451 + NM_000534 PMS1 0 . . . 1.8 0 24 5.29 No 62 0.66 No 0 0 No -24 0.74 Yes 48 88.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68294957 + NM_133509 RAD51B 0 . . . 4 74.33 17 5.57 Yes 67 0.95 Yes 0 0 No -16 0.72 Yes 35 86.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215592997 - NM_000465 BARD1 0 . . . 1.64 0 26 7.48 Yes 54 0.54 No 0 0 No -25 0.71 Yes 38 45.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152342918 - NM_005431 XRCC2 0 . . . 1.99 78.97 22 5.42 No 23 -2.89 No 0 0 No -21 0.59 No 42 94.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68401455 + NM_133509 RAD51B 0 . . . 0.58 60.84 70 9.01 Yes 48 0.02 No 0 0 No -24 0.78 Yes 52 67.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47804903 + NM_000251 MSH2 0 . . . 3.85 76.11 26 5.17 No 66 -4.28 No 0 0 No -25 0.86 Yes 46 54.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89627748 + NM_000314 PTEN 0 . . . 0.73 76.55 51 7.46 Yes 0 0.66 No 0 0 No -25 0.55 No 40 70.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41204109 - NM_007294 BRCA1 0 . . . 8.81 89.71 25 5.26 No 2 0.81 Yes 0 0 No -24 0.93 Yes 50 77.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41014747 + NM_001164269 RAD51 0 . . . 3.2 75.53 32 5.51 No 65 -2.53 No 0 0 No -31 0.67 Yes 47 53.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47700147 + NM_000251 MSH2 0 . . . 10.58 94.39 17 6.19 Yes 72 -3.65 No 0 0 No -29 0.71 Yes 28 48.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68815211 + NM_004360 CDH1 0 . . . 6.96 71.67 19 5 No 32 1.03 Yes 0 0 No -24 0.69 Yes 41 92.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59770665 - NM_032043 BRIP1 0 . . . 0.81 69.31 58 7.88 Yes -4 0.38 No 0 0 No -35 0.52 No 62 38.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94174950 - NM_005591 MRE11 0 . . . 2.85 64.13 27 5.7 Yes 33 1.17 Yes 0 0 No -26 0.9 Yes 16 38.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1205214 + NM_000455 STK11 0 . . . 0.41 0 31 6.46 Yes 13 0.72 No 0 0 No -26 0.7 Yes 45 43.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68465159 + NM_133509 RAD51B 0 . . . 6.09 82.93 17 4.46 No 53 -4.08 No 0 0 No -16 0.6 No 44 51.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48030169 + NM_000179 MSH6 0 . . . 1.41 84.22 19 5.96 Yes 3 0.7 No 0 0 No -21 0.65 No 50 63.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69017509 + NM_133509 RAD51B 0 . . . 0.95 0 23 5.89 Yes 5 0.93 Yes 0 0 No -22 0.83 Yes 46 52.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41249577 - NM_007294 BRCA1 0 . . . 2.99 84.63 23 5.99 Yes 2 1.23 Yes 0 0 No -22 0.8 Yes 13 18.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69062154 + NM_133509 RAD51B 0 . . . 5.83 88.23 30 7.25 Yes 6 1.13 Yes 0 0 No -29 0.83 Yes 46 78.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68476170 + NM_133509 RAD51B 0 . . . 5.17 76.62 17 5.06 No 47 1.35 Yes 0 0 No -22 0.48 No 26 75.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75509274 - NM_001040108 MLH3 0 . . . 5.71 75.75 16 4.67 No 33 1.33 Yes 0 0 No -26 0.45 No 43 67.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215611534 - NM_000465 BARD1 0 . . . 8.02 81.94 18 4.9 No 43 0.29 No 0 0 No -44 0.42 No 32 83.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68606056 + NM_133509 RAD51B 0 . . . 4.51 76.75 24 6.13 Yes 64 1.06 Yes 0 0 No -23 0.4 No 50 76.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33448124 - NM_002878 RAD51D 0 . . . 2.55 72.38 34 6.14 Yes 71 0.56 No 0 0 No -28 0.5 No 44 42.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7591050 - NM_000546 TP53 0 . . . 6.62 85.17 27 5.48 No 46 -2.34 No 0 0 No -56 0.63 No 45 54.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59886629 - NM_032043 BRIP1 0 . . . 4.43 80.59 29 6.65 Yes 43 0.99 Yes 0 0 No -28 0.87 Yes 46 88.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68414974 + NM_133509 RAD51B 0 . . . 6.57 83.08 75 8.95 Yes 48 -5.49 No 0 0 No -31 0.52 No 46 92.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84392777 - NM_139076 FAM175A 0 . . . 4.26 70.58 26 5.45 No 12 0.75 No 0 0 No -55 0.26 No 45 74.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33435932 - NM_002878 RAD51D 0 . . . 0.38 76.63 22 7.46 Yes 58 -3.78 No 0 0 No -21 0.56 No 48 81.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190723030 + NM_000534 PMS1 0 . . . 6.08 90.69 42 6.63 Yes 15 0.55 No 0 0 No -41 0.46 No 43 67.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94193985 - NM_005591 MRE11 0 . . . 1.33 74.4 37 9.51 Yes 76 0.74 No 0 0 No -31 0.68 Yes 40 33.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41197629 - NM_007294 BRCA1 0 . . . 4.19 0 22 5.42 No 55 -2.58 No 0 0 No -25 0.65 No 52 90.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47667562 + NM_000251 MSH2 0 . . . 1.28 81.91 25 5.48 No 38 1.1 Yes 0 0 No -28 0.73 Yes 20 24.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190700783 + NM_000534 PMS1 0 . . . 3.03 84.99 31 4.74 No 10 0.77 No 0 0 No -30 0.8 Yes 45 56.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152365780 - NM_005431 XRCC2 0 . . . 9.19 82.11 13 5.19 No 13 0.17 No 0 0 No -16 0.53 No 37 47.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56801332 + NM_058216 RAD51C 0 . . . 0.27 81.02 19 6.06 Yes 65 0.21 No 0 0 No -30 0.78 Yes 45 70.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59823286 - NM_032043 BRIP1 0 . . . 8.23 88.82 27 4.89 No 19 1.26 Yes 0 0 No -26 0.75 Yes 39 88.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215639402 - NM_000465 BARD1 0 . . . 4.02 73.5 39 7.28 Yes 66 0.06 No 0 0 No -24 0.61 No 20 31.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215654378 - NM_000465 BARD1 0 . . . 4.3 79.41 15 4.58 No 25 1.12 Yes 0 0 No -35 0.6 No 33 95.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68339414 + NM_133509 RAD51B 0 . . . 0.86 66.91 29 5.73 Yes 52 -4.46 No 0 0 No -28 0.64 No 40 46.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29103409 - NM_001005735 CHEK2 0 . . . 0.6 70.61 26 5.72 Yes 45 -2.94 No 0 0 No -25 0.61 No 60 65.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23613648 - NM_024675 PALB2 0 . . . 5.38 74.94 22 4.25 No 58 1.03 Yes 0 0 No -22 0.43 No 48 50.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104179482 - NM_001100119 XRCC3 0 . . . 2.47 72.61 24 6.68 Yes 25 -1.63 No 0 0 No -23 0.78 Yes 40 80.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68411431 + NM_133509 RAD51B 0 . . . 0.16 63.38 23 4.76 No 72 0.93 Yes 0 0 No -22 0.57 No 43 43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59927595 - NM_032043 BRIP1 0 . . . 0.1 74.68 20 3.89 No 64 1.1 Yes 0 0 No -45 0.76 Yes 52 60.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68785617 + NM_133509 RAD51B 0 . . . 4.12 73.71 21 5.08 No 8 -1.32 No 0 0 No -20 0.48 No 50 64.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41223830 - NM_007294 BRCA1 0 . . . 1.71 73.32 19 6.15 Yes 35 1.19 Yes 0 0 No -18 0.6 No 23 90.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68564583 + NM_133509 RAD51B 0 . . . 1.02 72.62 26 5.2 No 17 -2.67 No 0 0 No -25 0.62 No 46 63.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37081123 + NM_000249 MLH1 0 . . . 5.2 84.54 12 4.61 No 67 -5.29 No 0 0 No -21 0.35 No 52 54.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68659825 + NM_133509 RAD51B 0 . . . 4.38 78.77 20 5.41 No -2 1.59 Yes 0 0 No -19 0.76 Yes 19 78.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68702535 + NM_133509 RAD51B 0 . . . 1.55 70.51 19 4.99 No 68 0.39 No 0 0 No -21 0.68 Yes 52 34.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131951150 + NM_005732 RAD50 0 . . . 3.22 81.42 42 6.59 Yes 54 -3.49 No 0 0 No -21 0.37 No 50 74.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68876923 + NM_133509 RAD51B 0 . . . 3.32 75.16 36 5.76 Yes -3 0.65 No 0 0 No -29 0.68 Yes 44 69.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68576438 + NM_133509 RAD51B 0 . . . 1.29 68.45 20 5.1 No 11 0.25 No 0 0 No -26 0.42 No 47 49.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105200302 + NM_021930 RINT1 0 . . . 3.5 67.69 28 6.32 Yes 54 0.51 No 0 0 No -27 0.81 Yes 47 49.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47663694 + NM_000251 MSH2 0 . . . 1.87 80.12 22 4.36 No 6 1.13 Yes 0 0 No -21 0.73 Yes 41 50.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90995201 - NM_002485 NBN 0 . . . 1.33 67.9 12 5.07 No 5 0.3 No 0 0 No -11 0.45 No 53 31.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68960012 + NM_133509 RAD51B 0 . . . 2.54 78.84 36 8.28 Yes 14 0.61 No 0 0 No -35 0.84 Yes 44 97.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37068390 + NM_000249 MLH1 0 . . . 0.39 0 19 5 No 22 0.05 No 0 0 No -23 0.24 No 36 55.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108118965 + NM_000051 ATM 0 . . . 5.63 84.64 21 5.34 No 18 1.63 Yes 0 0 No -27 0.4 No 40 79.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29118525 - NM_001005735 CHEK2 0 . . . 3.97 84.41 16 4 No 40 1.95 Yes 0 0 No -40 0.76 Yes 21 71.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68865010 + NM_133509 RAD51B 0 . . . 0.86 71.39 19 6.56 Yes 69 0.29 No 0 0 No -24 0.39 No 54 48.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215616329 - NM_000465 BARD1 0 . . . 3.74 82.06 32 5.92 Yes 63 -3.58 No 0 0 No -31 0.86 Yes 50 44.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108110095 + NM_000051 ATM 0 . . . 4.92 76.04 21 4.8 No 9 1.36 Yes 0 0 No -20 0.93 Yes 49 89.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68932121 + NM_133509 RAD51B 0 . . . 8.13 78.71 12 4.8 No 28 2.08 Yes 0 0 No -25 0.64 No 30 67.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56788501 + NM_058216 RAD51C 0 . . . 3.83 80.46 34 5.92 Yes 11 0.7 No 0 0 No -28 0.62 No 47 62.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68343775 + NM_133509 RAD51B 0 . . . 0.45 0 26 5.29 No 40 -3.33 No 0 0 No -25 0.94 Yes 48 44.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215671164 - NM_000465 BARD1 0 . . . 7.35 78.06 18 5.66 Yes 32 0.03 No 0 0 No -55 0.37 No 39 81.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37092215 + NM_000249 MLH1 0 . . . 0.8 68.18 16 3.81 No 51 -1.19 No 0 0 No -37 0.53 No 11 62.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68475969 + NM_133509 RAD51B 0 . . . 1.1 76.33 26 4.96 No 18 0.68 No 0 0 No -25 0.81 Yes 40 83.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32964691 + NM_000059 BRCA2 0 . . . 8.16 83.63 18 4.02 No 27 0.89 Yes 0 0 No -23 0.41 No 40 53.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68588751 + NM_133509 RAD51B 0 . . . 5.31 74.45 25 4.9 No 2 0.62 No 0 0 No -39 0.94 Yes 48 55.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68482619 + NM_133509 RAD51B 0 . . . 6.56 77.28 33 4.18 No 38 1.91 Yes 0 0 No -32 0.61 No 33 65.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84386722 - NM_139076 FAM175A 0 . . . 0.16 68.99 20 7.14 Yes 59 1.05 Yes 0 0 No -19 0.7 Yes 42 57.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68364411 + NM_133509 RAD51B 0 . . . 4.99 83.09 35 4.99 No 33 1.19 Yes 0 0 No -22 0.32 No 25 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68802864 + NM_004360 CDH1 0 . . . 8.95 90.13 21 4.47 No 15 1.55 Yes 0 0 No -20 0.79 Yes 43 95.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90943622 - NM_002485 NBN 0 . . . 2.65 80.12 15 4.58 No 6 0.78 Yes 0 0 No -42 0.34 No 45 78.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68976854 + NM_133509 RAD51B 0 . . . 8.2 93.61 30 5.24 No 16 0.62 No 0 0 No -17 0.71 Yes 42 64.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131935320 + NM_005732 RAD50 0 . . . 3.39 68.9 32 5.45 No 47 0.24 No 0 0 No -20 0.37 No 50 69.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41204249 - NM_007294 BRCA1 0 . . . 4.5 71.16 54 8.68 Yes 1 1.14 Yes 0 0 No -31 0.81 Yes 47 78.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59911029 - NM_032043 BRIP1 0 . . . 6.3 88.76 35 5.92 Yes 45 0.68 No 0 0 No -34 0.8 Yes 46 64.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32954618 + NM_000059 BRCA2 0 . . . 6.06 81.26 13 4.27 No 3 0.64 No 0 0 No -17 0.47 No 43 82.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131930309 + NM_005732 RAD50 0 . . . 2.32 73.7 17 5.01 No 7 -2.06 No 0 0 No -24 0.63 No 48 26.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68621707 + NM_133509 RAD51B 0 . . . 0.12 72.19 27 3.93 No 60 0.97 Yes 0 0 No -26 0.53 No 47 93.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94191096 - NM_005591 MRE11 0 . . . 0.99 73.32 31 5.58 Yes 27 0.88 Yes 0 0 No -30 0.32 No 50 52.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6035613 - NM_000535 PMS2 0 . . . 0.13 72.18 29 4.99 No -3 0.21 No 0 0 No -28 0.41 No 52 42.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68901416 + NM_133509 RAD51B 0 . . . 0.29 67.93 37 6.38 Yes 11 2.43 Yes 0 0 No -24 0.93 Yes 47 68.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108190651 + NM_000051 ATM 0 . . . 4.2 77.95 29 5.91 Yes 29 0.52 No 31 0.61 Yes -22 0.46 No 48 56.22 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68725520 + NM_133509 RAD51B 0 . . . 1.86 67.48 33 4.98 No 56 1.09 Yes 0 0 No -26 0.59 No 50 84.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68614799 + NM_133509 RAD51B 0 . . . 1.22 67.78 41 6.31 Yes 52 1.62 Yes 0 0 No -27 0.56 No 45 29.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40995855 + NM_001164269 RAD51 0 . . . 1.32 75.1 39 7.15 Yes 25 1.11 Yes 0 0 No -38 0.9 Yes 33 86.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108241293 + NM_000051 ATM 0 . . . 6.83 72.48 15 5.66 Yes 68 0.68 No 0 0 No -25 0.81 Yes 43 52.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59766948 - NM_032043 BRIP1 0 . . . 7.8 91.85 21 5.07 No 69 0.06 No 0 0 No -20 0.64 No 45 82.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29106941 - NM_001005735 CHEK2 0 . . . 4.54 70.79 16 5.38 No 23 0.88 Yes 0 0 No -27 0.47 No 43 72.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32900868 + NM_000059 BRCA2 0 . . . 0.64 66.55 16 5.44 No 44 1.47 Yes 0 0 No -23 0.49 No 48 48.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108193712 + NM_000051 ATM 0 . . . 0.26 0 45 8.11 Yes 11 0.73 No 0 0 No -23 0.64 No 47 88.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108159878 + NM_000051 ATM 0 . . . 7.67 82.52 26 5.94 Yes 11 0.58 No 0 0 No -25 0.89 Yes 47 58.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108241381 + NM_000051 ATM 0 . . . 9.3 88.21 13 5 No 10 0.95 Yes 0 0 No -29 0.61 No 48 55.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68851467 + NM_133509 RAD51B 0 . . . 4.54 72.11 24 4.35 No 72 0.27 No 0 0 No -19 0.81 Yes 52 57.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68843989 + NM_004360 CDH1 0 . . . 2.89 67.64 24 5.17 No 49 -3.33 No 0 0 No -24 0.77 Yes 43 63.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68646532 + NM_133509 RAD51B 0 . . . 1.49 63.25 18 4.9 No 49 -5.49 No 0 0 No -57 0.83 Yes 53 37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59758257 - NM_032043 BRIP1 0 . . . 0.42 69.99 16 5.2 No -2 0.77 Yes 0 0 No -20 0.72 Yes 43 67.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94206786 - NM_005591 MRE11 0 . . . 2.84 63.15 29 5.73 Yes 65 0.84 Yes 0 0 No -28 0.89 Yes 35 62.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68802241 + NM_133509 RAD51B 0 . . . 1.48 74.08 36 6.19 Yes 32 1.15 Yes 0 0 No -35 0.6 No 50 84.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59912108 - NM_032043 BRIP1 0 . . . 6.48 85.85 22 4.68 No 47 -2.51 No 0 0 No -21 0.51 No 40 54.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23653138 - NM_024675 PALB2 0 . . . 8.51 78.57 18 4.9 No 75 -4.74 No 0 0 No -39 0.26 No 44 43.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89673182 + NM_000314 PTEN 0 . . . 7.11 81.17 40 7.14 Yes 64 1.05 Yes 0 0 No -39 0.85 Yes 37 49.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59828509 - NM_032043 BRIP1 0 . . . 5.75 80.87 13 4.36 No 40 0.37 No 0 0 No -22 0.32 No 50 60.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131924887 + NM_005732 RAD50 0 . . . 3.82 81.88 16 5.18 No 39 0.74 No 0 0 No -15 0.46 No 43 72.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32939841 + NM_000059 BRCA2 0 . . . 5.59 82.34 15 4.58 No 76 0.81 Yes 0 0 No -45 0.63 No 39 80.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68976356 + NM_133509 RAD51B 0 . . . 6.78 89.59 14 4.47 No 8 1.12 Yes 0 0 No -18 0.53 No 50 40.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68592511 + NM_133509 RAD51B 0 . . . 1.09 67.76 22 4.9 No 65 0.66 No 0 0 No -21 0.6 No 42 46.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190668915 + NM_000534 PMS1 0 . . . 2.35 78.02 17 5.87 Yes 67 0.78 Yes 0 0 No -16 0.5 No 52 51.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47732723 + NM_000251 MSH2 0 . . . 0.39 0 41 5.37 No 62 0.73 No 0 0 No -25 0.82 Yes 50 66.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215633778 - NM_000465 BARD1 0 . . . 5.58 88.96 18 4.9 No 18 0.59 No 0 0 No -22 0.53 No 51 39.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59779580 - NM_032043 BRIP1 0 . . . 2.78 66.19 16 6.55 Yes -4 0.38 No 0 0 No -24 0.6 No 45 51.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68412932 + NM_133509 RAD51B 0 . . . 4.54 75.62 24 8.9 Yes 5 1.34 Yes 0 0 No -23 0.35 No 42 61.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89727913 + NM_000314 PTEN 0 . . . 0.73 0 54 6.04 Yes 34 -3.4 No 0 0 No -30 0.74 Yes 34 91.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105202681 + NM_021930 RINT1 0 . . . 0.1 62.03 19 3.73 No 47 -4.57 No 0 0 No -30 0.53 No 43 33.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152356007 - NM_005431 XRCC2 0 . . . 4.32 79.89 17 5.73 Yes 59 0.5 No 0 0 No -27 0.63 No 48 70.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68460430 + NM_133509 RAD51B 0 . . . 0.57 77.33 30 6.56 Yes 18 1.66 Yes 0 0 No -29 0.81 Yes 36 82.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215666051 - NM_000465 BARD1 0 . . . 0.11 68.64 28 5.57 Yes 43 1.13 Yes 0 0 No -27 0.76 Yes 47 42.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32940181 + NM_000059 BRCA2 0 . . . 6.32 75.54 22 4.58 No 50 1.39 Yes 0 0 No -35 0.72 Yes 41 75.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131922523 + NM_005732 RAD50 0 . . . 2.79 59.6 32 6.4 Yes 70 -2.83 No 0 0 No -30 0.51 No 35 81.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152348427 - NM_005431 XRCC2 0 . . . 3.53 70.85 26 5.47 No 13 0.88 Yes 0 0 No -25 0.85 Yes 40 83.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89719347 + NM_000314 PTEN 0 . . . 1.91 68.54 22 5.1 No 47 0.64 No 0 0 No -21 0.88 Yes 49 60.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190675893 + NM_000534 PMS1 0 . . . 0.91 69.67 26 4.17 No 71 -5.62 No 0 0 No -25 0.8 Yes 51 60.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69144801 + NM_133509 RAD51B 0 . . . 9.11 85.59 15 3.53 No 63 0.61 No 0 0 No -28 0.87 Yes 38 75.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68422414 + NM_133509 RAD51B 0 . . . 0.33 0 27 4.57 No 72 -5.97 No 0 0 No -26 0.55 No 52 40.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68787990 + NM_133509 RAD51B 0 . . . 0.35 68.33 20 5.09 No 8 0.82 Yes 0 0 No -19 0.51 No 42 60.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152357220 - NM_005431 XRCC2 0 . . . 6.88 80.17 21 4.34 No 57 1.13 Yes 0 0 No -23 0.54 No 43 43.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105194743 + NM_021930 RINT1 0 . . . 2.41 68.34 28 6.24 Yes 21 1.7 Yes 0 0 No -27 0.73 Yes 37 64.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68890338 + NM_133509 RAD51B 0 . . . 11.64 87.98 21 4.8 No 69 0.28 No 0 0 No -20 0.79 Yes 46 59.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69035965 + NM_133509 RAD51B 0 . . . 5.58 70.69 21 5.73 Yes 12 2.32 Yes 0 0 No -26 0.65 No 46 90.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21992932 - NM_000077 CDKN2A 0 . . . 3.52 85.29 52 6.32 Yes 3 0.44 No 0 0 No -51 0.4 No 49 56.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59760416 - NM_032043 BRIP1 0 . . . 8.78 90 15 5.29 No 8 1.11 Yes 0 0 No -30 0.37 No 50 95.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68862640 + NM_133509 RAD51B 0 . . . 0.93 71.28 47 7 Yes 30 0.91 Yes 0 0 No -46 0.53 No 28 92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89719654 + NM_000314 PTEN 0 . . . 3.53 79.58 34 6.72 Yes 31 1.15 Yes 0 0 No -33 0.76 Yes 38 49.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37054947 + NM_000249 MLH1 0 . . . 1.54 79.65 18 5.74 Yes 22 -2.42 No 0 0 No -26 0.67 Yes 48 34.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47684250 + NM_000251 MSH2 0 . . . 8.4 87.29 29 5.92 Yes 71 1.14 Yes 0 0 No -28 0.88 Yes 44 83.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89688314 + NM_000314 PTEN 0 . . . 1.16 0 19 4.24 No 62 0.78 Yes 0 0 No -23 0.28 No 39 28.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69038964 + NM_133509 RAD51B 0 . . . 6.2 74.29 26 4.82 No 8 1.46 Yes 0 0 No -27 0.51 No 50 90.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69102806 + NM_133509 RAD51B 0 . . . 1.43 60.58 24 7.78 Yes 48 0.84 Yes 0 0 No -23 0.57 No 41 79.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108221938 + NM_000051 ATM 0 . . . 2.27 61.78 37 5.83 Yes 33 0.41 No 0 0 No -24 0.42 No 45 48.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40998116 + NM_001164269 RAD51 0 . . . 3.73 62.03 29 5.92 Yes 70 1.58 Yes 0 0 No -28 0.81 Yes 40 56.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68840306 + NM_004360 CDH1 0 . . . 1.59 74.06 27 5.39 No 13 1.52 Yes 0 0 No -24 0.69 Yes 45 72.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32926866 + NM_000059 BRCA2 0 . . . 0.73 70.12 30 5.57 Yes 6 0.25 No 0 0 No -29 0.68 Yes 52 81.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131960678 + NM_005732 RAD50 0 . . . 0.99 67.75 23 4.83 No 52 -4.53 No 0 0 No -22 0.68 Yes 41 58.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68972196 + NM_133509 RAD51B 0 . . . 1.54 69.4 28 6.3 Yes 38 0.23 No 0 0 No -28 0.53 No 45 66.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108205287 + NM_000051 ATM 0 . . . 3.3 0 20 4.13 No 39 -2.47 No 0 0 No -35 0.28 No 41 56.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108227383 + NM_000051 ATM 0 . . . 1.02 80.64 13 5.55 No 47 0.79 Yes 0 0 No -19 0.57 No 45 55.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41024491 + NM_001164269 RAD51 0 . . . 2.73 0 14 5.36 No 67 0.81 Yes 0 0 No -25 0.56 No 49 21.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108236888 + NM_000051 ATM 0 . . . 2.79 78.19 26 7.55 Yes 2 0.08 No 0 0 No -25 0.89 Yes 52 71.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89642361 + NM_000314 PTEN 0 . . . 3.04 68.94 39 6.71 Yes 7 2.09 Yes 0 0 No -38 0.96 Yes 39 87.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108119089 + NM_000051 ATM 0 . . . 8.24 83.83 25 5.1 No 60 0.47 No 0 0 No -24 0.56 No 48 55.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047616 + NM_000249 MLH1 0 . . . 3.66 85.81 46 7.21 Yes 9 1.03 Yes 0 0 No -30 0.56 No 49 93.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68295601 + NM_133509 RAD51B 0 . . . 5.4 76.46 13 5.48 No 54 0.97 Yes 0 0 No -23 0.79 Yes 42 59.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108184689 + NM_000051 ATM 0 . . . 1.02 69.42 25 5.39 No 42 0.52 No 0 0 No -22 0.71 Yes 31 60.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68333244 + NM_133509 RAD51B 0 . . . 2.67 86.65 12 5 No 6 0.06 No 0 0 No -26 0.87 Yes 52 67.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94222245 - NM_005591 MRE11 0 . . . 8.63 77.13 16 4.52 No 25 0.7 No 0 0 No -24 0.76 Yes 41 86.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6044499 - NM_000535 PMS2 0 . . . 4.12 87.69 22 4.8 No 63 0.53 No 0 0 No -16 0.58 No 50 25.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1225531 + NM_000455 STK11 0 . . . 2.41 68.34 21 5.92 Yes 21 1.71 Yes 0 0 No -20 0.81 Yes 37 72.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68946633 + NM_133509 RAD51B 0 . . . 0.47 0 21 5.56 Yes 70 1.23 Yes 0 0 No -28 0.74 Yes 56 47.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131945157 + NM_005732 RAD50 0 . . . 4.55 84.37 29 7.07 Yes 19 0.93 Yes 0 0 No -28 0.87 Yes 30 80.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68840760 + NM_133509 RAD51B 0 . . . 2.95 82.14 17 5.63 Yes 15 0.2 No 0 0 No -23 0.69 Yes 48 82.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68907883 + NM_133509 RAD51B 0 . . . 1.69 78.92 17 7.24 Yes 7 1.77 Yes 0 0 No -33 0.53 No 51 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84390112 - NM_139076 FAM175A 0 . . . 3.35 75.01 28 5.38 No 40 0.83 Yes 0 0 No -27 0.87 Yes 33 79.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40999549 + NM_001164269 RAD51 0 . . . 3.1 84.79 31 5.92 Yes 2 1.51 Yes 0 0 No -30 0.88 Yes 44 57.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40994495 + NM_001164269 RAD51 0 . . . 5.91 81.71 20 5.1 No 73 1.72 Yes 0 0 No -43 0.5 No 38 82.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69062049 + NM_133509 RAD51B 0 . . . 2.98 75.31 28 4.77 No 37 1.03 Yes 0 0 No -27 0.53 No 21 53.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69018384 + NM_133509 RAD51B 0 . . . 3.4 82.5 28 4.56 No 7 1.56 Yes 0 0 No -23 0.34 No 51 89.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152363642 - NM_005431 XRCC2 0 . . . 2 0 23 4.8 No 29 0.04 No 0 0 No -22 0.68 Yes 51 76.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7566075 - NM_000546 TP53 0 . . . 0.25 77.35 22 4.69 No 53 1.51 Yes 0 0 No -21 0.96 Yes 49 59.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68874965 + NM_133509 RAD51B 0 . . . 1.97 67.01 21 5.2 No 10 0.54 No 0 0 No -20 0.87 Yes 44 76.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94216337 - NM_005591 MRE11 0 . . . 6.89 82.57 20 4.36 No 56 -2.37 No 0 0 No -19 0.55 No 46 84.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68519814 + NM_133509 RAD51B 0 . . . 0.3 69.22 25 5.94 Yes 2 0.79 Yes 0 0 No -23 0.37 No 43 45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59933628 - NM_032043 BRIP1 0 . . . 2.06 71.42 15 5.27 No -4 0.06 No 0 0 No -27 0.48 No 43 35.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37069053 + NM_000249 MLH1 0 . . . 3.67 79.38 20 5.1 No 31 1.17 Yes 0 0 No -23 0.84 Yes 27 59.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45798090 - NM_001048171 MUTYH 0 . . . 1.88 71.87 23 4.29 No NA NA NA 21 0.68 Yes -22 0.8 Yes 49 56.9 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr16 68811367 + NM_004360 CDH1 0 . . . 3.15 76.23 30 5.1 No 9 1.31 Yes 0 0 No -29 0.84 Yes 49 78.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75501894 - NM_001040108 MLH3 0 . . . 1.14 82.65 17 6.93 Yes 24 0.1 No 0 0 No -16 0.51 No 41 64.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68586066 + NM_133509 RAD51B 0 . . . 3.86 0 22 6.29 Yes 75 1.01 Yes 0 0 No -29 0.51 No 23 85.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47767025 + NM_000251 MSH2 0 . . . 8.32 91.49 12 4.34 No 13 0.62 No 0 0 No -26 0.71 Yes 45 94.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152368959 - NM_005431 XRCC2 0 . . . 5.51 83.74 15 5.26 No 7 1.23 Yes 0 0 No -28 0.27 No 51 89.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68395877 + NM_133509 RAD51B 0 . . . 10.38 83.04 17 5.83 Yes 46 1.89 Yes 0 0 No -33 0.44 No 39 92.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89719318 + NM_000314 PTEN 0 . . . 4.67 87.94 21 4.9 No 18 0.64 No 0 0 No -20 0.7 Yes 44 87.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68311505 + NM_133509 RAD51B 0 . . . 6.73 77.21 36 6 Yes 24 1.95 Yes 0 0 No -35 0.83 Yes 34 84.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32915039 + NM_000059 BRCA2 0 . . . 0.03 67.81 17 4.35 No 3 0.79 Yes 0 0 No -31 0.72 Yes 46 60.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108200063 + NM_000051 ATM 0 . . . 5.17 76.56 17 4.69 No 12 1.28 Yes 0 0 No -21 0.33 No 46 85.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37057164 + NM_000249 MLH1 0 . . . 0.45 66.9 35 5.87 Yes 20 1.28 Yes 0 0 No -30 0.57 No 38 31.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68783475 + NM_004360 CDH1 0 . . . 6.84 84.14 37 5.2 No 40 -1.72 No 0 0 No -34 0.47 No 46 54.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68574277 + NM_133509 RAD51B 0 . . . 1.93 85.91 25 5.02 No -1 0.96 Yes 0 0 No -29 0.59 No 52 52.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59840168 - NM_032043 BRIP1 0 . . . 2.84 78.11 23 3.61 No 0 1.17 Yes 0 0 No -22 0.71 Yes 45 38.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94204436 - NM_005591 MRE11 0 . . . 1.32 68.43 15 5.18 No -1 0.19 No 0 0 No -25 0.4 No 49 68.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94175042 - NM_005591 MRE11 0 . . . 4.74 80.77 18 5.37 No 34 1.12 Yes 0 0 No -27 0.67 Yes 24 33.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69121652 + NM_133509 RAD51B 0 . . . 3.56 81.26 15 4.9 No 61 1.2 Yes 0 0 No -27 0.51 No 50 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215663429 - NM_000465 BARD1 0 . . . 1.3 64.08 26 4.98 No 48 -5.23 No 0 0 No -25 0.89 Yes 50 39.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69116100 + NM_133509 RAD51B 0 . . . 3.15 77.45 18 7 Yes 26 -2.2 No 0 0 No -28 0.59 No 29 67.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47632031 + NM_000251 MSH2 0 . . . 2.24 80.12 22 5.23 No 7 1.02 Yes 0 0 No -21 0.43 No 51 75.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75486752 - NM_001040108 MLH3 0 . . . 4.69 77.12 25 4.88 No 38 1.03 Yes 0 0 No -22 0.62 No 42 48.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69146498 + NM_133509 RAD51B 0 . . . 7.94 83.05 25 7.66 Yes 42 1.75 Yes 0 0 No -24 0.61 No 51 52.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68342465 + NM_133509 RAD51B 0 . . . 4.37 76.52 21 5.66 Yes 20 0.3 No 0 0 No -20 0.7 Yes 38 91.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105209980 + NM_021930 RINT1 0 . . . 3.98 81.17 25 5.1 No 76 0.22 No 0 0 No -24 0.71 Yes 44 76.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94150852 - NM_005591 MRE11 0 . . . 7.56 86.23 25 5.1 No 5 1.4 Yes 0 0 No -24 0.84 Yes 46 35.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68901208 + NM_133509 RAD51B 0 . . . 1.22 0 13 5.38 No 44 0.41 No 0 0 No -26 0.47 No 38 58.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108109844 + NM_000051 ATM 0 . . . 1.56 64.98 35 6.07 Yes 59 0.37 No 0 0 No -34 0.76 Yes 12 49.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90977508 - NM_002485 NBN 0 . . . 1.66 68.91 49 4.75 No 61 0.42 No 0 0 No -34 0.58 No 30 59.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90984346 - NM_002485 NBN 0 . . . 0.27 0 18 5.98 Yes 32 0.91 Yes 0 0 No -27 0.43 No 40 68.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152351993 - NM_005431 XRCC2 0 . . . 0.73 66.79 42 6.49 Yes 20 0.64 No 0 0 No -41 0.54 No 45 37.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108097455 + NM_000051 ATM 0 . . . 3.63 84.41 32 5.43 No 35 0.77 No 0 0 No -28 0.53 No 43 61.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68712204 + NM_133509 RAD51B 0 . . . 0.55 0 14 5.57 Yes 29 1.15 Yes 0 0 No -24 0.38 No 29 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68723406 + NM_133509 RAD51B 0 . . . 2.43 0 14 4 No 68 1.32 Yes 0 0 No -26 0.32 No 27 39.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41235715 - NM_007294 BRCA1 0 . . . 4.87 87.98 15 4.35 No 1 1.28 Yes 0 0 No -21 0.8 Yes 47 42.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69034984 + NM_133509 RAD51B 0 . . . 0.03 69.47 25 6.16 Yes 67 -4.88 No 0 0 No -24 0.65 No 47 36.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215618531 - NM_000465 BARD1 0 . . . 0.3 70.59 16 6.77 Yes 42 -3.16 No 0 0 No -18 0.54 No 53 57.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84396578 - NM_139076 FAM175A 0 . . . 4.66 83.69 17 4.57 No 0 0.78 Yes 0 0 No -22 0.34 No 52 67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32906489 + NM_000059 BRCA2 0 . . . 2 61.45 16 4.32 No 40 -4.17 No 0 0 No -19 0.35 No 53 48.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190716615 + NM_000534 PMS1 0 . . . 2.11 0 45 4.79 No 6 0.07 No 0 0 No -27 0.6 No 36 68.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69147446 + NM_133509 RAD51B 0 . . . 0.07 62.35 16 5.29 No 72 -3.82 No 0 0 No -21 0.61 No 35 41.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108134826 + NM_000051 ATM 0 . . . 1.59 68.48 37 6.85 Yes 58 -1.63 No 0 0 No -36 0.37 No 41 84.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108104748 + NM_000051 ATM 0 . . . 2.35 76.95 25 5.5 No 40 0.53 No 0 0 No -30 0.57 No 45 48.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68788524 + NM_004360 CDH1 0 . . . 7.03 87.38 21 5.57 Yes 65 -3.05 No 0 0 No -20 0.53 No 47 80.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6040919 - NM_000535 PMS2 0 . . . 0.1 66.13 28 4.16 No 38 -4.3 No 0 0 No -27 0.94 Yes 53 54.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190702706 + NM_000534 PMS1 0 . . . 1.05 71.71 24 5.2 No 8 0.38 No 0 0 No -23 0.79 Yes 50 90.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89642068 + NM_000314 PTEN 0 . . . 4.75 71.64 9 3.87 No 8 0.16 No 0 0 No -21 0.33 No 50 76.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68930831 + NM_133509 RAD51B 0 . . . 2.7 62.62 15 4.4 No 66 0.11 No 0 0 No -34 0.79 Yes 32 57.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215673130 - NM_000465 BARD1 0 . . . 3.95 82.09 15 5.48 No 20 1.41 Yes 0 0 No -21 0.41 No 38 85.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810325 + NM_004360 CDH1 0 . . . 0.8 76.26 26 5.23 No 59 -5.93 No 0 0 No -26 0.65 No 46 65.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89711617 + NM_000314 PTEN 0 . . . 1.1 69.62 38 7.79 Yes 39 1.15 Yes 0 0 No -20 0.58 No 38 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108204192 + NM_000051 ATM 0 . . . 1.32 71.18 19 5.54 No 46 0.81 Yes 0 0 No -24 0.59 No 30 75.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68718463 + NM_133509 RAD51B 0 . . . 7.17 87.46 15 6.78 Yes 28 1.37 Yes 0 0 No -18 0.31 No 47 71.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45805533 - NM_001048171 MUTYH 0 . . . 3.92 86.85 48 7.19 Yes 43 -3.58 No 0 0 No -40 0.67 Yes 46 46.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108203769 + NM_000051 ATM 0 . . . 4.23 78.15 33 4.64 No -2 0.52 No 0 0 No -35 0.73 Yes 48 76.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68451792 + NM_133509 RAD51B 0 . . . 4.52 0 19 5 No 63 0.7 No 0 0 No -18 0.25 No 49 82.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59887912 - NM_032043 BRIP1 0 . . . 1.95 63.59 16 5.09 No 46 0.1 No 0 0 No -27 0.55 No 48 44.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59890364 - NM_032043 BRIP1 0 . . . 10.19 93.22 14 4.47 No -3 0.87 Yes 0 0 No -38 0.3 No 39 54.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68952724 + NM_133509 RAD51B 0 . . . 5.6 77.14 18 5.87 Yes 23 0.12 No 0 0 No -22 0.45 No 54 70.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47709082 + NM_000251 MSH2 0 . . . 8.81 76.61 24 4.97 No 15 0.81 Yes 0 0 No -23 0.79 Yes 43 55.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37081400 + NM_000249 MLH1 0 . . . 2.18 73.88 27 6.02 Yes 4 1.7 Yes 0 0 No -26 0.45 No 43 73.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68540144 + NM_133509 RAD51B 0 . . . 2.17 62.97 32 6.07 Yes 15 1.37 Yes 0 0 No -29 0.66 No 43 64.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68666072 + NM_133509 RAD51B 0 . . . 5.18 77.92 32 5.91 Yes 2 0.97 Yes 0 0 No -28 0.56 No 51 86.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68744480 + NM_133509 RAD51B 0 . . . 1.41 0 29 7.68 Yes 37 -1.41 No 0 0 No -28 0.92 Yes 33 54.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68437486 + NM_133509 RAD51B 0 . . . 8.37 89.31 28 4.24 No 40 0.93 Yes 0 0 No -22 0.67 Yes 45 84.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56804095 + NM_058216 RAD51C 0 . . . 3.97 63.75 24 4.99 No 19 0.21 No 0 0 No -23 0.75 Yes 39 49.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68375483 + NM_133509 RAD51B 0 . . . 4.6 76.25 15 4.56 No 46 -4.52 No 0 0 No -34 0.67 Yes 45 73.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68992382 + NM_133509 RAD51B 0 . . . 4.23 67.9 22 5.29 No 29 1.12 Yes 0 0 No -21 0.85 Yes 22 74.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59793609 - NM_032043 BRIP1 0 . . . 2.07 72.42 27 5.44 No 49 -4.69 No 0 0 No -26 0.92 Yes 52 88.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59941842 - NM_032043 BRIP1 0 . . . 8.86 85.52 23 5.37 No 52 0.35 No 0 0 No -25 0.45 No 52 48.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190648177 + NM_000534 PMS1 0 . . . 1.49 74.06 19 4.47 No 45 0.34 No 0 0 No -18 0.92 Yes 59 21.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68869931 + NM_004360 CDH1 0 . . . 3.87 82.86 15 5.1 No 3 1.43 Yes 0 0 No -21 0.57 No 43 64.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152358344 - NM_005431 XRCC2 0 . . . 3.37 85.2 24 5.39 No 38 0.93 Yes 0 0 No -23 0.74 Yes 49 68.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68830643 + NM_004360 CDH1 0 . . . 0.83 68.45 27 5.2 No 36 -3.21 No 0 0 No -47 0.65 No 42 74.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68785937 + NM_133509 RAD51B 0 . . . 3.7 72.82 30 5.36 No 41 1.58 Yes 0 0 No -56 0.53 No 42 50.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68666340 + NM_133509 RAD51B 0 . . . 4.13 67.37 26 5.47 No 21 -3.48 No 0 0 No -23 0.66 Yes 43 71.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6028320 - NM_000535 PMS2 0 . . . 4.4 76.35 11 3.97 No 66 0.72 No 0 0 No -20 0.67 Yes 36 40.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215657507 - NM_000465 BARD1 0 . . . 1.37 61.95 27 3.78 No 75 -5.45 No 0 0 No -26 0.89 Yes 38 89.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59922881 - NM_032043 BRIP1 0 . . . 2.75 76.77 29 5.87 Yes 69 -5.54 No 0 0 No -28 0.5 No 51 44.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94149923 - NM_005591 MRE11 0 . . . 4.42 84.22 30 5.45 No 20 0.67 No 0 0 No -29 0.52 No 50 45.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68575854 + NM_133509 RAD51B 0 . . . 4.44 83.78 30 4.6 No 63 0.15 No 0 0 No -24 0.29 No 45 56.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68865801 + NM_133509 RAD51B 0 . . . 2.51 0 27 5.2 No 49 -4.82 No 0 0 No -26 0.57 No 49 55.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69143856 + NM_133509 RAD51B 0 . . . 11.23 88.27 24 5.81 Yes 16 0.03 No 0 0 No -23 0.52 No 42 64.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68817590 + NM_133509 RAD51B 0 . . . 5.41 78.47 27 5.74 Yes 6 0.99 Yes 0 0 No -26 0.85 Yes 43 90.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68527830 + NM_133509 RAD51B 0 . . . 4.12 78.38 12 3.87 No 53 0.5 No 0 0 No -30 0.48 No 12 21.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47686023 + NM_000251 MSH2 0 . . . 6.3 78.79 16 5.15 No 39 0.83 Yes 0 0 No -24 0.9 Yes 43 38.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68377904 + NM_133509 RAD51B 0 . . . 2.07 73.74 15 5.29 No 2 0.07 No 0 0 No -45 0.32 No 45 67.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68489388 + NM_133509 RAD51B 0 . . . 9.67 88.17 26 7.14 Yes 55 1.08 Yes 0 0 No -25 0.72 Yes 17 80.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52441796 - NM_004656 BAP1 0 . . . 0.23 0 13 5.2 No 49 0.45 No 0 0 No -20 0.26 No 47 40.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56802127 + NM_058216 RAD51C 0 . . . 6.23 81.54 26 5.67 Yes 9 0.46 No 0 0 No -25 0.7 Yes 49 61.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59930257 - NM_032043 BRIP1 0 . . . 6.38 73.58 38 6.53 Yes 35 1.27 Yes 0 0 No -25 0.4 No 49 33.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41265947 - NM_007294 BRCA1 0 . . . 1.86 68.06 32 5.92 Yes 52 0.05 No 0 0 No -31 0.61 No 48 76.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68710005 + NM_133509 RAD51B 0 . . . 3.95 69.88 17 4.79 No 54 0.83 Yes 0 0 No -37 0.79 Yes 40 72.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69006544 + NM_133509 RAD51B 0 . . . 0.79 69.98 37 8.59 Yes 15 1.06 Yes 0 0 No -36 0.96 Yes 43 83.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68696700 + NM_133509 RAD51B 0 . . . 6.43 78.42 11 5.57 Yes 67 1.09 Yes 0 0 No -24 0.72 Yes 40 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94182957 - NM_005591 MRE11 0 . . . 4.11 78.35 23 5.38 No 71 0.29 No 0 0 No -22 0.66 No 42 75.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89711146 + NM_000314 PTEN 0 . . . 3.21 72.77 26 5.48 No 8 0.99 Yes 0 0 No -25 0.58 No 50 63.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32957605 + NM_000059 BRCA2 0 . . . 1.34 77.34 36 5.99 Yes -4 0.3 No 0 0 No -23 0.7 Yes 47 89.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68821993 + NM_004360 CDH1 0 . . . 3.77 70.85 33 6.91 Yes 23 1.63 Yes 0 0 No -32 0.5 No 45 81.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108151895 + NM_000051 ATM 0 . . . 1.8 65.75 18 4.9 No 2 0.19 No 0 0 No -22 0.46 No 56 62.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105191226 + NM_021930 RINT1 0 . . . 4.49 82.05 22 5.1 No 23 0.45 No 0 0 No -21 0.57 No 39 70.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56801169 + NM_058216 RAD51C 0 . . . 2.6 69.47 44 6.87 Yes 40 -4.17 No 0 0 No -32 0.53 No 52 59.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68968454 + NM_133509 RAD51B 0 . . . 3.88 71.32 22 4.82 No 14 0.21 No 0 0 No -21 0.63 No 44 93.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68832410 + NM_133509 RAD51B 0 . . . 2.75 74.64 15 5.1 No 65 0.46 No 0 0 No -22 0.59 No 47 43.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68838758 + NM_004360 CDH1 0 . . . 1.34 0 18 5.17 No 27 1.1 Yes 0 0 No -24 0.78 Yes 31 74.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68494693 + NM_133509 RAD51B 0 . . . 8.55 84.6 27 5.74 Yes 37 1.43 Yes 0 0 No -56 0.69 Yes 33 89.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47788917 + NM_000251 MSH2 0 . . . 2.07 79.63 12 4.69 No 47 0.09 No 0 0 No -24 0.28 No 45 31.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41209607 - NM_007294 BRCA1 0 . . . 3.72 68.34 20 5.39 No 21 1.72 Yes 0 0 No -23 0.92 Yes 37 81.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59860328 - NM_032043 BRIP1 0 . . . 6.16 85.91 23 5.99 Yes 7 1.24 Yes 0 0 No -20 0.43 No 51 92.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48019850 + NM_000179 MSH6 0 . . . 2 77.82 24 5.38 No 2 1.52 Yes 0 0 No -24 0.66 No 21 73.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104178897 - NM_001100119 XRCC3 0 . . . 3.51 90.05 27 5.22 No -1 -0.4 No 0 0 No -26 0.58 No 46 54.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68452269 + NM_133509 RAD51B 0 . . . 7.28 72.57 45 6.34 Yes 58 0.51 No 0 0 No -41 0.43 No 43 58.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68449426 + NM_133509 RAD51B 0 . . . 4.38 77.91 25 5.15 No 34 0.7 No 0 0 No -24 0.82 Yes 35 59.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68849797 + NM_133509 RAD51B 0 . . . 2.17 79.78 24 5.1 No 66 0.63 No 0 0 No -24 0.58 No 36 62.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68866879 + NM_133509 RAD51B 0 . . . 2.8 82.61 31 6.77 Yes 75 0.77 No 0 0 No -30 0.55 No 34 92.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68843509 + NM_004360 CDH1 0 . . . 0.44 0 25 5.39 No 30 -2.25 No 0 0 No -22 0.53 No 52 38.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68933987 + NM_133509 RAD51B 0 . . . 1.68 0 19 6.36 Yes 19 1.25 Yes 0 0 No -22 0.85 Yes 51 37.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68380490 + NM_133509 RAD51B 0 . . . 1.33 75.29 21 5.2 No -4 0.19 No 0 0 No -20 0.83 Yes 47 57.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94196836 - NM_005591 MRE11 0 . . . 6.34 71.88 20 5.48 No 50 1 Yes 0 0 No -19 0.85 Yes 38 53.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108158817 + NM_000051 ATM 0 . . . 5.05 84.41 23 5.37 No 10 0.68 No 0 0 No -22 0.9 Yes 45 55.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69151112 + NM_133509 RAD51B 0 . . . 0.1 79.98 36 5.74 Yes 24 0.51 No 0 0 No -35 0.94 Yes 46 81.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108230104 + NM_000051 ATM 0 . . . 2.63 64.16 35 6.4 Yes 9 1.11 Yes 0 0 No -34 0.89 Yes 49 45.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68479359 + NM_133509 RAD51B 0 . . . 1.17 0 25 5.19 No 76 -4.16 No 0 0 No -22 0.47 No 41 69.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68849476 + NM_133509 RAD51B 0 . . . 1.06 63.98 15 4.58 No 47 0.55 No 0 0 No -40 0.4 No 42 42.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68870175 + NM_133509 RAD51B 0 . . . 3.9 76.67 29 4.65 No 43 0.15 No 0 0 No -28 0.78 Yes 50 82.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6040167 - NM_000535 PMS2 0 . . . 7.22 91.74 17 4.8 No 19 0.87 Yes 0 0 No -23 0.72 Yes 49 96.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32907751 + NM_000059 BRCA2 0 . . . 0.09 0 22 5.88 Yes 71 -4.44 No 0 0 No -21 0.44 No 37 92.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47666511 + NM_000251 MSH2 0 . . . 2.94 80.09 30 7.41 Yes 66 1.2 Yes 0 0 No -29 0.54 No 36 66.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68559120 + NM_133509 RAD51B 0 . . . 1.6 0 28 5.29 No 19 -1.14 No 0 0 No -27 0.73 Yes 39 60.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41248917 - NM_007294 BRCA1 0 . . . 6.74 79.36 21 4.97 No -3 0.72 No 0 0 No -20 0.9 Yes 43 59.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23634256 - NM_024675 PALB2 0 . . . 4.33 80.52 21 5.1 No 7 0.64 No 0 0 No -20 0.53 No 47 73.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84405358 - NM_139076 FAM175A 0 . . . 2.07 0 18 4.9 No 1 0.95 Yes 22 0.7 Yes -17 0.43 No 47 59.18 No BPP: No, SVM: Yes, Branch: Yes, LB: No, RNABPS: No chr2 190685638 + NM_000534 PMS1 0 . . . 6.3 76.76 23 3.52 No 40 -2.61 No 0 0 No -22 0.52 No 49 67.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41204435 - NM_007294 BRCA1 0 . . . 3.93 70.94 40 6.63 Yes 36 -3.96 No 0 0 No -39 0.66 No 47 61.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68487181 + NM_133509 RAD51B 0 . . . 1.12 63.95 18 5.48 No 15 1.11 Yes 0 0 No -17 0.54 No 37 73.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48010297 + NM_000179 MSH6 0 . . . 2.25 0 26 4.79 No 49 -1.33 No 0 0 No -25 0.54 No 41 31.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21986696 - NM_000077 CDKN2A 0 . . . 2.9 56.9 21 4.52 No 68 0.69 No 0 0 No -20 0.56 No 41 38.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190722461 + NM_000534 PMS1 0 . . . 2.07 65.65 33 6 Yes 51 -2.39 No 0 0 No -32 0.88 Yes 42 65.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90997273 - NM_002485 NBN 0 . . . 0.46 68.59 27 4.48 No 56 -5.2 No 0 0 No -33 0.66 No 48 63.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90957782 - NM_002485 NBN 0 . . . 3.37 73.11 38 4.96 No -4 1.23 Yes 0 0 No -22 0.49 No 31 83.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68837992 + NM_004360 CDH1 0 . . . 2.61 68.16 33 6.23 Yes 71 0.37 No 0 0 No -32 0.87 Yes 51 59.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75513507 - NM_001040108 MLH3 0 . . . 0.62 60.66 31 6.56 Yes 7 0.39 No 0 0 No -30 0.59 No 51 33.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69036317 + NM_133509 RAD51B 0 . . . 8.58 79.06 26 5.38 No 44 -3.95 No 0 0 No -25 0.88 Yes 51 57.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59901159 - NM_032043 BRIP1 0 . . . 0.22 64.35 22 5.7 Yes 36 0.02 No 0 0 No -24 0.78 Yes 22 86.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215667764 - NM_000465 BARD1 0 . . . 0.19 0 21 5.95 Yes 66 0.11 No 0 0 No -20 0.92 Yes 52 88.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104177393 - NM_001100119 XRCC3 0 . . . 2.34 69.99 22 4.66 No -4 0.1 No 0 0 No -21 0.47 No 33 63.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190712994 + NM_000534 PMS1 0 . . . 1.81 68.35 57 5.56 Yes 34 0.46 No 0 0 No -57 0.78 Yes 54 42.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69106700 + NM_133509 RAD51B 0 . . . 4.93 85.02 14 7.14 Yes 4 1.05 Yes 0 0 No -32 0.61 No 45 64.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47698255 + NM_000251 MSH2 0 . . . 4.03 81.88 39 6.03 Yes 13 0.93 Yes 0 0 No -31 0.53 No 34 58.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59909456 - NM_032043 BRIP1 0 . . . 2.42 73.71 25 4.69 No 55 1.87 Yes 0 0 No -28 0.68 Yes 48 75.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68785973 + NM_004360 CDH1 0 . . . 1.84 85.37 36 6.48 Yes 33 1.12 Yes 0 0 No -36 0.44 No 50 49.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56776412 + NM_058216 RAD51C 0 . . . 5.4 84.17 29 4.76 No 43 1.67 Yes 0 0 No -21 0.79 Yes 15 82.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131895933 + NM_005732 RAD50 0 . . . 5.38 68.67 19 4.32 No 5 0.54 No 0 0 No -28 0.56 No 49 77.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108225665 + NM_000051 ATM 0 . . . 5.91 84.3 29 5.83 Yes 14 0.4 No 0 0 No -29 0.58 No 44 85.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68702487 + NM_133509 RAD51B 0 . . . 7.69 78.49 17 5.83 Yes 20 0.42 No 0 0 No -25 0.49 No 45 95.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68883840 + NM_133509 RAD51B 0 . . . 6.65 75.64 27 5.26 No 35 0.67 No 0 0 No -32 0.6 No 44 80.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68465431 + NM_133509 RAD51B 0 . . . 0.55 0 13 5.15 No 58 0.27 No 0 0 No -25 0.85 Yes 47 37.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37076924 + NM_000249 MLH1 0 . . . 9.5 90.7 36 6.85 Yes 23 1.49 Yes 0 0 No -23 0.6 No 46 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6048848 - NM_000535 PMS2 0 . . . 4.63 81.82 28 5.23 No -2 0.5 No 0 0 No -45 0.33 No 44 28.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68774397 + NM_133509 RAD51B 0 . . . 3.98 69.97 29 6.32 Yes 11 0.62 No 0 0 No -28 0.81 Yes 47 74.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68615191 + NM_133509 RAD51B 0 . . . 4.53 76.8 15 4.76 No 32 0.63 No 0 0 No -57 0.61 No 40 56.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69084560 + NM_133509 RAD51B 0 . . . 1.29 74.73 12 5.2 No 57 0.46 No 0 0 No -25 0.34 No 14 56.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48013349 + NM_000179 MSH6 0 . . . 2.25 64.58 35 6.53 Yes 52 -4.48 No 0 0 No -34 0.54 No 57 29.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68830656 + NM_004360 CDH1 0 . . . 2.83 73.85 32 6.16 Yes -1 0.01 No 0 0 No -29 0.74 Yes 53 42.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29125672 - NM_001005735 CHEK2 0 . . . 1.63 82.27 21 5.78 Yes 8 0.73 No 0 0 No -21 0.91 Yes 50 75.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29113363 - NM_001005735 CHEK2 0 . . . 2.21 83.29 15 4.58 No 11 0.35 No 0 0 No -23 0.38 No 49 60.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190654256 + NM_000534 PMS1 0 . . . 1.87 77.57 35 5.64 Yes 52 1.01 Yes 0 0 No -29 0.41 No 60 36.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68689684 + NM_133509 RAD51B 0 . . . 0.25 0 25 5.09 No 18 1.55 Yes 0 0 No -29 0.22 No 47 53.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68436983 + NM_133509 RAD51B 0 . . . 4.45 80.54 21 6.27 Yes 72 0.37 No 0 0 No -26 0.48 No 43 65.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90984687 - NM_002485 NBN 0 . . . 1.27 0 23 5.38 No 64 0.58 No 0 0 No -22 0.78 Yes 48 20.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1214140 + NM_000455 STK11 0 . . . 4.16 73.99 60 4.96 No 68 -0.3 No 0 0 No -24 0.47 No 46 84.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190697600 + NM_000534 PMS1 0 . . . 2.18 70.26 14 5.1 No 9 0.27 No 0 0 No -24 0.46 No 45 44.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68993519 + NM_133509 RAD51B 0 . . . 5.91 82.93 33 5.88 Yes 20 1.32 Yes 0 0 No -32 0.72 Yes 38 66.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75505588 - NM_001040108 MLH3 0 . . . 2.28 80.22 35 6.16 Yes 40 -3.08 No 0 0 No -34 0.84 Yes 43 61.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68559858 + NM_133509 RAD51B 0 . . . 4.05 73.08 24 5.37 No 51 0.76 No 0 0 No -23 0.84 Yes 39 88.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90975039 - NM_002485 NBN 0 . . . 2.76 72.95 40 7.07 Yes 71 -6.55 No 0 0 No -37 0.29 No 49 55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68836957 + NM_133509 RAD51B 0 . . . 5 64.87 20 4.31 No 72 -3.32 No 0 0 No -20 0.5 No 45 72.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68584304 + NM_133509 RAD51B 0 . . . 2.09 56.1 37 5.48 No 43 0.12 No 0 0 No -18 0.66 No 44 50.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89698385 + NM_000314 PTEN 0 . . . 0.41 73.9 14 5.2 No 66 0.12 No 0 0 No -45 0.62 No 49 89.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59892800 - NM_032043 BRIP1 0 . . . 0.33 72.84 22 5.29 No 53 0.17 No 0 0 No -21 0.48 No 45 63.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69035486 + NM_133509 RAD51B 0 . . . 1.68 65.45 29 5.03 No 56 -1.5 No 0 0 No -20 0.45 No 37 82.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190712018 + NM_000534 PMS1 0 . . . 5.37 87.89 24 7.15 Yes 70 1.25 Yes 0 0 No -27 0.51 No 50 72.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68964735 + NM_133509 RAD51B 0 . . . 8.6 84.05 26 6.15 Yes 11 0.21 No 0 0 No -25 0.76 Yes 42 96.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29097599 - NM_001005735 CHEK2 0 . . . 0.51 56.1 15 5.2 No 49 1.29 Yes 0 0 No -14 0.25 No 44 69.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84381890 - NM_139076 FAM175A 0 . . . 3.88 74.87 27 6.78 Yes 76 0.64 No 0 0 No -26 0.56 No 40 59.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105188858 + NM_021930 RINT1 0 . . . 4.57 59.68 20 5.1 No 16 0.86 Yes 0 0 No -19 0.52 No 42 88.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84381178 - NM_139076 FAM175A 0 . . . 0.55 62.55 16 6.55 Yes 38 -4.41 No 0 0 No -26 0.66 No 44 49.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89671941 + NM_000314 PTEN 0 . . . 3.06 70.85 25 4.88 No 23 1.16 Yes 0 0 No -24 0.49 No 40 68.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69149230 + NM_133509 RAD51B 0 . . . 5.73 80.99 16 3.95 No 2 1.13 Yes 0 0 No -19 0.73 Yes 50 57.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41244922 - NM_007294 BRCA1 0 . . . 9.13 87.13 17 4.66 No 11 0.15 No 0 0 No -20 0.73 Yes 47 79.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89642023 + NM_000314 PTEN 0 . . . 0.34 62.93 21 4.68 No 46 -1.86 No 0 0 No -20 0.24 No 37 54.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68753800 + NM_133509 RAD51B 0 . . . 3.34 74.46 26 7.58 Yes 24 1.15 Yes 0 0 No -25 0.83 Yes 49 58.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89724345 + NM_000314 PTEN 0 . . . 7.02 82.82 33 7.62 Yes 1 0.71 No 0 0 No -32 0.6 No 41 62.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68677733 + NM_133509 RAD51B 0 . . . 10.76 94.96 19 4.95 No 30 1.33 Yes 0 0 No -18 0.7 Yes 46 86.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56800905 + NM_058216 RAD51C 0 . . . 6.73 73.77 19 4.04 No 36 0.91 Yes 0 0 No -28 0.35 No 48 53.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68392750 + NM_133509 RAD51B 0 . . . 2.65 70.79 46 8.12 Yes 27 0.52 No 0 0 No -45 0.57 No 28 63.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68807538 + NM_133509 RAD51B 0 . . . 8.58 81.29 33 5.42 No 4 1.52 Yes 0 0 No -32 0.27 No 54 47.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68320087 + NM_133509 RAD51B 0 . . . 10.3 85.65 14 4.45 No 30 2.21 Yes 0 0 No -30 0.59 No 43 56.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37047164 + NM_000249 MLH1 0 . . . 6.3 87.7 19 4.8 No 56 0.98 Yes 0 0 No -18 0.41 No 47 69.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215628120 - NM_000465 BARD1 0 . . . 7.63 80.17 9 5 No 28 1.16 Yes 0 0 No -20 0.86 Yes 30 94.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32950749 + NM_000059 BRCA2 0 . . . 7.1 75.59 28 5.83 Yes 27 0.51 No 0 0 No -31 0.71 Yes 24 83.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47632153 + NM_000251 MSH2 0 . . . 4.6 69.94 17 5.57 Yes 66 1.55 Yes 0 0 No -16 0.69 Yes 47 70.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90952268 - NM_002485 NBN 0 . . . 5.15 77.06 25 7.48 Yes 3 1.57 Yes 0 0 No -24 0.94 Yes 55 35.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68356730 + NM_133509 RAD51B 0 . . . 6.08 80.59 26 5.63 Yes 36 0.65 No 0 0 No -23 0.39 No 51 47.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108193514 + NM_000051 ATM 0 . . . 6.94 76.54 18 4.89 No 10 1.02 Yes 0 0 No -52 0.58 No 27 58.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131910696 + NM_005732 RAD50 0 . . . 1.38 74.52 36 5.76 Yes 61 -2.75 No 0 0 No -28 0.43 No 41 55.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68677401 + NM_133509 RAD51B 0 . . . 2.38 72.58 31 5.48 No 73 1.37 Yes 0 0 No -28 0.9 Yes 25 40.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84385864 - NM_139076 FAM175A 0 . . . 5.96 80.94 33 6.54 Yes 20 -2.32 No 0 0 No -27 0.48 No 47 61.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56800759 + NM_058216 RAD51C 0 . . . 1.96 75.31 12 4.12 No 49 -4.99 No 0 0 No -42 0.6 No 46 68.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131940088 + NM_005732 RAD50 0 . . . 2.5 66.72 27 6.15 Yes 45 1.11 Yes 0 0 No -26 0.75 Yes 38 58.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68492120 + NM_133509 RAD51B 0 . . . 6.38 71.08 26 5.52 No 3 0.52 No 0 0 No -25 0.82 Yes 38 78.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52445404 - NM_004656 BAP1 0 . . . 6.74 83.82 34 6.32 Yes 5 1.27 Yes 0 0 No -33 0.88 Yes 46 74.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108225331 + NM_000051 ATM 0 . . . 0.71 62.03 19 4.79 No 23 0.37 No 0 0 No -24 0.61 No 35 68.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68824522 + NM_133509 RAD51B 0 . . . 3.24 71.04 32 5.62 Yes 43 -2.71 No 0 0 No -21 0.77 Yes 49 76.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108219143 + NM_000051 ATM 0 . . . 3.53 70.06 35 4.65 No 64 -5.52 No 0 0 No -34 0.41 No 49 70.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89624006 + NM_000314 PTEN 0 . . . 6.47 76.44 19 4.61 No 25 -0.06 No 0 0 No -18 0.72 Yes 27 60.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68468293 + NM_133509 RAD51B 0 . . . 0.98 74.95 29 7.28 Yes 53 1.09 Yes 0 0 No -28 0.94 Yes 22 60.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59820406 - NM_032043 BRIP1 0 . . . 6.52 70.06 22 5.1 No 45 -3.23 No 0 0 No -21 0.73 Yes 38 35.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68725224 + NM_133509 RAD51B 0 . . . 6.26 94.73 31 5.03 No 4 0.62 No 0 0 No -20 0.54 No 40 88.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215608811 - NM_000465 BARD1 0 . . . 5.32 74.38 27 5.73 Yes 68 0.95 Yes 0 0 No -24 0.63 No 41 95.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215596064 - NM_000465 BARD1 0 . . . 1.73 64.5 21 5.09 No 24 1.59 Yes 0 0 No -20 0.78 Yes 34 86.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108221697 + NM_000051 ATM 0 . . . 0.18 60.85 18 4.3 No 43 1.1 Yes 0 0 No -17 0.75 Yes 44 64.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7570365 - NM_000546 TP53 0 . . . 6.24 80.39 17 5.43 No 49 0.49 No 0 0 No -16 0.38 No 43 40.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152354771 - NM_005431 XRCC2 0 . . . 5.04 85.05 29 6.39 Yes 37 0.63 No 0 0 No -28 0.63 No 47 72.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47649837 + NM_000251 MSH2 0 . . . 2.97 67.22 14 4.9 No 7 0.75 No 0 0 No -29 0.35 No 47 62.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68548061 + NM_133509 RAD51B 0 . . . 3.39 65.31 35 6.39 Yes 66 1.1 Yes 0 0 No -34 0.75 Yes 44 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37037040 + NM_000249 MLH1 0 . . . 4.48 85.86 21 3.56 No 4 1.26 Yes 0 0 No -21 0.46 No 54 47.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89638018 + NM_000314 PTEN 0 . . . 3.25 80.12 34 6.22 Yes 8 1.2 Yes 0 0 No -28 0.43 No 50 89.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59898284 - NM_032043 BRIP1 0 . . . 3.8 86.06 20 5.1 No 72 0.94 Yes 0 0 No -47 0.68 Yes 12 50.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68871199 + NM_004360 CDH1 0 . . . 1.6 74.96 19 3.84 No 40 0.43 No 0 0 No -19 0.4 No 18 94.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131919802 + NM_005732 RAD50 0 . . . 3.88 66.65 22 4.7 No 35 1.04 Yes 0 0 No -22 0.77 Yes 43 51.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41206053 - NM_007294 BRCA1 0 . . . 1.57 62.59 29 5.29 No 1 0.06 No 0 0 No -28 0.84 Yes 40 71.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131979036 + NM_005732 RAD50 0 . . . 3.64 69.96 15 5.16 No 14 0.96 Yes 0 0 No -21 0.31 No 44 85.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7569032 - NM_000546 TP53 0 . . . 3.87 88.29 32 6.16 Yes 9 0.89 Yes 0 0 No -31 0.74 Yes 49 94.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190743848 + NM_000534 PMS1 0 . . . 2.63 70.73 26 5.25 No 75 -6.42 No 0 0 No -25 0.82 Yes 32 33.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59847008 - NM_032043 BRIP1 0 . . . 9.19 79.16 58 7.24 Yes 62 1.53 Yes 0 0 No -23 0.78 Yes 32 37.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59895468 - NM_032043 BRIP1 0 . . . 3.68 70.85 32 5.92 Yes 13 0.42 No 0 0 No -31 0.94 Yes 47 71.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68782422 + NM_133509 RAD51B 0 . . . 5.12 85.02 14 4.47 No 6 1.26 Yes 0 0 No -49 0.38 No 52 85.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131959472 + NM_005732 RAD50 0 . . . 0.05 77.66 111 10.06 Yes 26 -1.35 No 0 0 No -36 0.48 No 47 78.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108121302 + NM_000051 ATM 0 . . . 1.81 0 18 4.35 No 51 1.08 Yes 0 0 No -34 0.56 No 51 49.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68410366 + NM_133509 RAD51B 0 . . . 3.52 81.46 75 9.5 Yes 37 0.97 Yes 0 0 No -34 0.46 No 52 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56778377 + NM_058216 RAD51C 0 . . . 3.88 85.41 25 4.71 No 3 0.86 Yes 0 0 No -24 0.38 No 50 92.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29116901 - NM_001005735 CHEK2 0 . . . 2.96 68.12 56 7.26 Yes 64 0.54 No 0 0 No -32 0.39 No 47 55.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950256 + NM_005732 RAD50 0 . . . 0.9 59.78 32 5.66 Yes 44 -3.2 No 0 0 No -31 0.74 Yes 41 83.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68961045 + NM_133509 RAD51B 0 . . . 0.53 74.61 23 4.78 No 16 0.22 No 0 0 No -22 0.84 Yes 51 77.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68292889 + NM_133509 RAD51B 0 . . . 6.99 73.83 44 6.89 Yes -3 0.52 No 0 0 No -28 0.61 No 42 61.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41241166 - NM_007294 BRCA1 0 . . . 6.91 83.82 31 5.83 Yes 8 0.79 Yes 0 0 No -30 0.9 Yes 50 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47803283 + NM_000251 MSH2 0 . . . 1.05 69.14 32 4.78 No 54 0.57 No 0 0 No -31 0.88 Yes 41 53.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94180017 - NM_005591 MRE11 0 . . . 1.01 82.06 16 4.89 No 53 -3.95 No 0 0 No -45 0.67 Yes 53 59.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190667650 + NM_000534 PMS1 0 . . . 0.71 71.23 36 6.08 Yes 35 -3.69 No 0 0 No -32 0.53 No 45 56.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68707764 + NM_133509 RAD51B 0 . . . 4.42 0 26 6.1 Yes 56 1.02 Yes 0 0 No -25 0.76 Yes 51 67.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89672796 + NM_000314 PTEN 0 . . . 0.59 0 20 5.08 No 59 0.58 No 0 0 No -19 0.56 No 29 55.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29124489 - NM_001005735 CHEK2 0 . . . 4.39 79.24 9 4.8 No 41 1.11 Yes 0 0 No -36 0.73 Yes 17 84.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75516079 - NM_001040108 MLH3 0 . . . 0.27 78.63 28 5.38 No 51 -3.67 No 0 0 No -20 0.57 No 50 54.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108196233 + NM_000051 ATM 0 . . . 5.55 67.36 11 4.12 No 4 0.25 No 0 0 No -29 0.72 Yes 43 64.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52433158 - NM_004656 BAP1 0 . . . 2.89 72.11 22 5.45 No 39 -3.94 No 0 0 No -21 0.76 Yes 44 75.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68286806 + NM_133509 RAD51B 0 . . . 0.63 59.42 27 5.64 Yes 72 -1.91 No 0 0 No -26 0.94 Yes 56 83.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69014877 + NM_133509 RAD51B 0 . . . 5.26 80.26 30 7.07 Yes 28 1.41 Yes 0 0 No -29 0.94 Yes 30 77.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32899234 + NM_000059 BRCA2 0 . . . 0.43 68.53 20 3.86 No 25 -2.71 No 0 0 No -20 0.49 No 25 92.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69059960 + NM_133509 RAD51B 0 . . . 5.17 81.75 13 5 No 54 0.7 No 0 0 No -18 0.34 No 49 77.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29091544 - NM_001005735 CHEK2 0 . . . 1.51 80.65 33 4.79 No 32 1.59 Yes 0 0 No -32 0.75 Yes 26 53.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94169611 - NM_005591 MRE11 0 . . . 3.55 69.5 28 5.17 No 1 0.99 Yes 0 0 No -20 0.54 No 51 64.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152352331 - NM_005431 XRCC2 0 . . . 9.72 85.14 32 6.05 Yes 29 0.57 No 0 0 No -27 0.33 No 31 85.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68295944 + NM_133509 RAD51B 0 . . . 5.13 79.48 26 5 No 63 1.14 Yes 0 0 No -33 0.29 No 52 63.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94225386 - NM_005591 MRE11 0 . . . 0.17 74.68 13 5.66 Yes 64 1.1 Yes 0 0 No -22 0.3 No 36 39.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1212435 + NM_000455 STK11 0 . . . 1.04 0 44 6.28 Yes 55 1.48 Yes 0 0 No -26 0.89 Yes 50 42.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94161343 - NM_005591 MRE11 0 . . . 7.4 80.39 29 5.22 No 35 1.04 Yes 0 0 No -33 0.52 No 41 77.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190682764 + NM_000534 PMS1 0 . . . 3.82 69.27 21 5.1 No 56 1.52 Yes 0 0 No -20 0.82 Yes 20 72.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131961384 + NM_005732 RAD50 0 . . . 5.74 73.11 18 4.8 No 11 1.79 Yes 0 0 No -24 0.73 Yes 47 46.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32941072 + NM_000059 BRCA2 0 . . . 0.87 70.22 29 5.27 No 15 1.7 Yes 0 0 No -28 0.48 No 48 55.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21975634 - NM_000077 CDKN2A 0 . . . 4.19 87.73 26 5.29 No 16 0.78 Yes 0 0 No -25 0.84 Yes 42 50.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68347166 + NM_133509 RAD51B 0 . . . 3.05 82.48 18 4.9 No 51 0.97 Yes 0 0 No -54 0.39 No 50 78.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69126125 + NM_133509 RAD51B 0 . . . 2.48 85.93 27 6.84 Yes 57 0.96 Yes 0 0 No -26 0.82 Yes 53 51.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108122950 + NM_000051 ATM 0 . . . 0.58 72.5 10 4.9 No 6 1.24 Yes 0 0 No -20 0.57 No 27 65.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68570526 + NM_133509 RAD51B 0 . . . 0.15 52.38 14 4.8 No 46 -3.95 No 0 0 No -25 0.51 No 51 44.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41252732 - NM_007294 BRCA1 0 . . . 2.46 67.92 19 4.37 No 24 -2.17 No 0 0 No -32 0.73 Yes 34 55.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69018697 + NM_133509 RAD51B 0 . . . 1.63 79.01 40 6.3 Yes 75 0.25 No 0 0 No -21 0.6 No 15 65.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75491257 - NM_001040108 MLH3 0 . . . 0.29 74.45 52 6.23 Yes 73 0.93 Yes 0 0 No -24 0.88 Yes 48 77.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6023654 - NM_000535 PMS2 0 . . . 2.34 80.09 25 5.38 No 4 0.58 No 0 0 No -25 0.5 No 49 48.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68311945 + NM_133509 RAD51B 0 . . . 3.66 78.66 26 5.48 No 28 -2.45 No 0 0 No -25 0.87 Yes 54 83.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108125148 + NM_000051 ATM 0 . . . 0.47 64.09 26 6 Yes 68 -4.52 No 0 0 No -29 0.49 No 47 82.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68314704 + NM_133509 RAD51B 0 . . . 4.59 69.46 30 5.3 No 61 1.06 Yes 0 0 No -29 0.41 No 46 73.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68562208 + NM_133509 RAD51B 0 . . . 4.65 91.57 22 6 Yes 64 0.47 No 0 0 No -21 0.68 Yes 50 17.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89725522 + NM_000314 PTEN 0 . . . 8.36 87.26 51 6.84 Yes 19 0.11 No 0 0 No -33 0.52 No 39 87.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89663332 + NM_000314 PTEN 0 . . . 2.3 0 18 4.05 No 11 0.88 Yes 0 0 No -17 0.29 No 47 62.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108109340 + NM_000051 ATM 0 . . . 1.73 78.35 31 5.46 No 54 0.88 Yes 0 0 No -30 0.81 Yes 53 47.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68758951 + NM_133509 RAD51B 0 . . . 0.16 0 32 5.83 Yes 18 0.99 Yes 0 0 No -31 0.89 Yes 40 81.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68611357 + NM_133509 RAD51B 0 . . . 5.66 77.97 23 5.42 No 12 1.46 Yes 0 0 No -27 0.51 No 46 87.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68706499 + NM_133509 RAD51B 0 . . . 8.03 82.83 20 3.9 No 40 -2.36 No 0 0 No -19 0.77 Yes 42 53.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190713529 + NM_000534 PMS1 0 . . . 4.93 78.8 15 5.66 Yes 50 1.64 Yes 0 0 No -28 0.3 No 44 81.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68412231 + NM_133509 RAD51B 0 . . . 1.64 73.97 21 4.85 No 65 0.72 No 0 0 No -25 0.68 Yes 33 67.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190715711 + NM_000534 PMS1 0 . . . 9.49 84.37 15 4.47 No 9 0.07 No 0 0 No -26 0.24 No 49 83.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215596840 - NM_000465 BARD1 0 . . . 0.94 58.99 22 5.73 Yes 65 -2.1 No 0 0 No -21 0.9 Yes 47 46.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59922346 - NM_032043 BRIP1 0 . . . 7.53 73.9 16 4.69 No 24 1.12 Yes 0 0 No -33 0.33 No 34 59.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7564682 - NM_000546 TP53 0 . . . 6.51 84.92 35 5.97 Yes 70 -4.1 No 0 0 No -34 0.66 No 44 59.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59858062 - NM_032043 BRIP1 0 . . . 5.45 89.83 27 5.73 Yes 59 1.36 Yes 0 0 No -28 0.43 No 45 77.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56809572 + NM_058216 RAD51C 0 . . . 2.57 0 24 5.31 No 35 1.08 Yes 0 0 No -23 0.79 Yes 38 79.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68296078 + NM_133509 RAD51B 0 . . . 4.42 84.22 36 6.08 Yes 8 1.13 Yes 0 0 No -35 0.62 No 50 94.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68589074 + NM_133509 RAD51B 0 . . . 5.05 71.4 13 4.89 No 61 -3.61 No 0 0 No -23 0.63 No 47 40.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59763622 - NM_032043 BRIP1 0 . . . 2.76 53.87 27 5.84 Yes 69 -3.18 No 0 0 No -27 0.42 No 43 31.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108098889 + NM_000051 ATM 0 . . . 1.67 0 35 6.17 Yes 46 0.29 No 0 0 No -34 0.5 No 43 89.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41204732 - NM_007294 BRCA1 0 . . . 6.26 74.78 37 6.74 Yes 22 1.41 Yes 0 0 No -40 0.45 No 47 79.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68913232 + NM_133509 RAD51B 0 . . . 0.63 63.42 12 5.57 Yes -1 0.95 Yes 0 0 No -43 0.6 No 34 72.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68286216 + NM_133509 RAD51B 0 . . . 0.94 76.63 21 4.77 No 58 -4.45 No 0 0 No -20 0.54 No 43 60.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68873684 + NM_133509 RAD51B 0 . . . 2.49 63.16 21 4.8 No -3 0.61 No 0 0 No -24 0.63 No 24 63.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68404290 + NM_133509 RAD51B 0 . . . 2.37 68.77 22 4.87 No 17 0.54 No 0 0 No -21 0.97 Yes 51 51.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52439126 - NM_004656 BAP1 0 . . . 4.66 0 15 3.34 No 65 1.25 Yes 0 0 No -22 0.61 No 50 61.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89672937 + NM_000314 PTEN 0 . . . 6.08 85.16 54 5.95 Yes 28 1.38 Yes 0 0 No -41 0.5 No 48 77.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59782985 - NM_032043 BRIP1 0 . . . 2.58 74.17 22 4.65 No 11 1.17 Yes 0 0 No -21 0.67 Yes 47 56.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21979387 - NM_000077 CDKN2A 0 . . . 5 79.52 23 5.19 No 41 2 Yes 0 0 No -25 0.69 Yes 17 91.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69034309 + NM_133509 RAD51B 0 . . . 3.37 75.79 30 4.74 No 11 1.12 Yes 0 0 No -35 0.43 No 47 77.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89635340 + NM_000314 PTEN 0 . . . 8.4 81.8 13 4.77 No 63 0.5 No 0 0 No -21 0.83 Yes 45 91.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215642702 - NM_000465 BARD1 0 . . . 6.65 86 15 5.2 No 69 0.17 No 0 0 No -23 0.42 No 55 46.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68796331 + NM_133509 RAD51B 0 . . . 1.89 68.3 28 5.38 No -1 0.29 No 0 0 No -27 0.89 Yes 44 56.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68726761 + NM_133509 RAD51B 0 . . . 4.29 79.77 22 5.31 No 66 -2.85 No 0 0 No -21 0.55 No 49 68.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851073 - NM_032043 BRIP1 0 . . . 3.31 0 42 6.69 Yes 36 0.71 No 0 0 No -28 0.58 No 22 92.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75498348 - NM_001040108 MLH3 0 . . . 4.12 79.97 9 5.46 No 9 1.09 Yes 0 0 No -28 0.74 Yes 49 84.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68427596 + NM_133509 RAD51B 0 . . . 2.88 83.23 23 5.67 Yes 33 1.2 Yes 0 0 No -22 0.8 Yes 25 87.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108095883 + NM_000051 ATM 0 . . . 2.47 67.31 24 5.48 No 42 -3.3 No 0 0 No -21 0.28 No 47 45.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59768387 - NM_032043 BRIP1 0 . . . 6.27 86.6 24 6.24 Yes 27 1.19 Yes 0 0 No -23 0.82 Yes 51 56.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68850850 + NM_133509 RAD51B 0 . . . 2.45 73.23 35 5.31 No 32 1.15 Yes 0 0 No -34 0.82 Yes 45 92.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68426403 + NM_133509 RAD51B 0 . . . 8.63 83.26 18 5.37 No 72 -4.31 No 0 0 No -22 0.56 No 49 91.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56803575 + NM_058216 RAD51C 0 . . . 6.27 75.88 26 5.29 No 41 0.42 No 0 0 No -25 0.71 Yes 45 77.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69100825 + NM_133509 RAD51B 0 . . . 2.73 76.74 33 5.49 No 66 0.21 No 0 0 No -26 0.55 No 50 81.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68952047 + NM_133509 RAD51B 0 . . . 3.18 70.75 14 4.47 No 34 1.89 Yes 0 0 No -19 0.42 No 38 86.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90963093 - NM_002485 NBN 0 . . . 6.79 83.25 31 4.67 No 65 1.23 Yes 0 0 No -23 0.69 Yes 47 61.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68921618 + NM_133509 RAD51B 0 . . . 2.02 77.78 19 4.06 No 10 -2.74 No 0 0 No -26 0.9 Yes 48 66.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215675259 - NM_000465 BARD1 0 . . . 1.95 72.78 12 4.69 No 3 1 Yes 0 0 No -19 0.79 Yes 50 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68803064 + NM_004360 CDH1 0 . . . 6.12 82.58 12 4.94 No 62 0.82 Yes 0 0 No -12 0.36 No 34 86.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90986194 - NM_002485 NBN 0 . . . 5.94 78.43 22 5.83 Yes 2 0.55 No 0 0 No -21 0.55 No 52 49.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47785200 + NM_000251 MSH2 0 . . . 8.59 87.09 17 3.1 No 17 0.81 Yes 0 0 No -16 0.63 No 41 85.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21978164 - NM_000077 CDKN2A 0 . . . 4.59 67.6 16 4.58 No 2 0 No 0 0 No -19 0.28 No 49 65.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131967516 + NM_005732 RAD50 0 . . . 3.38 73.28 73 9.49 Yes 76 1.3 Yes 0 0 No -35 0.9 Yes 51 36.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68724998 + NM_133509 RAD51B 0 . . . 5.69 76.71 33 5.42 No 46 0.19 No 0 0 No -32 0.56 No 42 52.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646394 + NM_133509 RAD51B 0 . . . 3.47 81.21 17 4.8 No 21 0.44 No 0 0 No -20 0.54 No 43 67.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68311909 + NM_133509 RAD51B 0 . . . 7.49 83.04 15 3.56 No 69 -4.48 No 0 0 No -19 0.63 No 43 63.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47693611 + NM_000251 MSH2 0 . . . 0.77 70.39 30 5.39 No 22 0.07 No 0 0 No -22 0.3 No 49 22.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68308537 + NM_133509 RAD51B 0 . . . 6.01 77.46 33 6.75 Yes 38 0.59 No 0 0 No -32 0.71 Yes 49 33.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68857739 + NM_133509 RAD51B 0 . . . 4.37 84.64 21 5.48 No 50 0.92 Yes 0 0 No -28 0.92 Yes 42 42.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59920515 - NM_032043 BRIP1 0 . . . 9.28 83.87 24 4.87 No 31 1.9 Yes 0 0 No -48 0.79 Yes 39 80.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108105869 + NM_000051 ATM 0 . . . 1.82 64.36 40 6.39 Yes 12 0.63 No 0 0 No -26 0.48 No 37 38.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68842260 + NM_133509 RAD51B 0 . . . 1.94 0 24 4.8 No 74 1.13 Yes 0 0 No -26 0.43 No 54 87.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37067283 + NM_000249 MLH1 0 . . . 4.44 81.56 20 6.08 Yes 2 0.89 Yes 0 0 No -28 0.61 No 56 41.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29101813 - NM_001005735 CHEK2 0 . . . 2.13 85.37 37 6.73 Yes 50 1.02 Yes 0 0 No -27 0.75 Yes 51 55.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47682934 + NM_000251 MSH2 0 . . . 5.02 71.38 23 5.39 No 54 -5.66 No 0 0 No -22 0.69 Yes 42 58.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68858376 + NM_133509 RAD51B 0 . . . 4.53 81.32 21 4.85 No 19 0.98 Yes 0 0 No -25 0.54 No 39 74.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215618273 - NM_000465 BARD1 0 . . . 5.13 75.09 32 5.73 Yes 44 2.12 Yes 0 0 No -28 0.34 No 14 84.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215650294 - NM_000465 BARD1 0 . . . 1.53 69.45 44 7.59 Yes 40 1.01 Yes 0 0 No -28 0.38 No 51 49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68753680 + NM_133509 RAD51B 0 . . . 2.25 70.82 23 4.31 No 59 1.08 Yes 0 0 No -22 0.58 No 48 61.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59915359 - NM_032043 BRIP1 0 . . . 6.97 77.75 14 5.62 Yes -2 0.82 Yes 0 0 No -32 0.46 No 48 39.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59920149 - NM_032043 BRIP1 0 . . . 2.16 78.86 16 4.83 No 44 0.56 No 0 0 No -30 0.39 No 49 61.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68454052 + NM_133509 RAD51B 0 . . . 0.85 65.94 37 6.48 Yes 10 1.74 Yes 0 0 No -36 0.65 No 23 76.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33426592 - NM_002878 RAD51D 0 . . . 3.85 77.78 22 7.17 Yes 68 -6.09 No 0 0 No -21 0.96 Yes 51 45.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75507728 - NM_001040108 MLH3 0 . . . 3.66 71.05 12 5.66 Yes 49 0.41 No 0 0 No -40 0.59 No 44 51.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56798015 + NM_058216 RAD51C 0 . . . 4.04 85.02 32 5.56 Yes 66 0.64 No 0 0 No -35 0.82 Yes 43 55.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6045958 - NM_000535 PMS2 0 . . . 0.54 72.49 23 4.8 No 57 -1.49 No 0 0 No -22 0.71 Yes 23 53.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59779392 - NM_032043 BRIP1 0 . . . 3.06 65.48 23 5.12 No 65 -4.82 No 0 0 No -22 0.67 Yes 55 29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68912014 + NM_133509 RAD51B 0 . . . 3.88 81.87 14 5.83 Yes 8 0.57 No 0 0 No -18 0.53 No 49 70.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68784377 + NM_133509 RAD51B 0 . . . 3.65 83.93 18 4.69 No -1 0.67 No 0 0 No -17 0.69 Yes 50 63.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69078104 + NM_133509 RAD51B 0 . . . 4.8 76.17 25 4.43 No 55 0.69 No 0 0 No -17 0.31 No 49 88.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37090621 + NM_000249 MLH1 0 . . . 4.2 71.2 17 5.38 No 18 0.41 No 0 0 No -22 0.55 No 40 65.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47708592 + NM_000251 MSH2 0 . . . 5.03 70.58 66 10.18 Yes 49 0.28 No 0 0 No -65 0.16 No 43 88.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75509435 - NM_001040108 MLH3 0 . . . 4.97 74.71 32 6.16 Yes 50 -1.73 No 0 0 No -31 0.89 Yes 41 62.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69094510 + NM_133509 RAD51B 0 . . . 3.56 66.57 27 5.13 No 53 1.46 Yes 0 0 No -26 0.92 Yes 48 48.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68365381 + NM_133509 RAD51B 0 . . . 2.74 77.7 17 4.95 No 30 0.62 No 0 0 No -26 0.73 Yes 49 83.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84403252 - NM_139076 FAM175A 0 . . . 5.53 72.44 34 4.83 No 40 0.68 No 0 0 No -28 0.43 No 46 71.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47717587 + NM_000251 MSH2 0 . . . 0.38 67.34 17 4.79 No 57 0.96 Yes 0 0 No -16 0.45 No 44 65.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68382297 + NM_133509 RAD51B 0 . . . 7.45 90.77 21 4.8 No 37 -2.65 No 0 0 No -20 0.65 No 47 92.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90951156 - NM_002485 NBN 0 . . . 7.67 86.52 29 6.32 Yes 67 0.58 No 0 0 No -28 0.94 Yes 44 51.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108163214 + NM_000051 ATM 0 . . . 3.07 74.54 23 6.61 Yes 15 1.62 Yes 0 0 No -22 0.68 Yes 43 91.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48030485 + NM_000179 MSH6 0 . . . 0.16 72.81 31 5.77 Yes 28 0.18 No 0 0 No -30 0.71 Yes 47 79.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215642586 - NM_000465 BARD1 0 . . . 8.91 90.33 24 3.95 No 4 1.2 Yes 0 0 No -23 0.64 No 37 66.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108207136 + NM_000051 ATM 0 . . . 3.89 73.01 23 5.1 No 12 0.02 No 0 0 No -22 0.8 Yes 45 44.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84402065 - NM_139076 FAM175A 0 . . . 0.28 72.41 22 6.71 Yes 60 1.83 Yes 0 0 No -28 0.45 No 54 48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69041272 + NM_133509 RAD51B 0 . . . 4.07 81.71 27 6.4 Yes 50 0.66 No 0 0 No -26 0.87 Yes 39 77.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47634295 + NM_000251 MSH2 0 . . . 4.69 75.16 16 6.61 Yes 9 0.82 Yes 0 0 No -27 0.71 Yes 49 91.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47777944 + NM_000251 MSH2 0 . . . 4.22 81.79 90 9.69 Yes 11 0.24 No 0 0 No -49 0.5 No 43 90.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108221737 + NM_000051 ATM 0 . . . 0.09 63.72 21 4.06 No 4 0.81 Yes 0 0 No -36 0.35 No 41 62.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75495551 - NM_001040108 MLH3 0 . . . 7.65 84.47 25 5.29 No 68 0.76 No 0 0 No -24 0.65 No 52 60.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90980012 - NM_002485 NBN 0 . . . 2.93 66.52 22 4.99 No 75 -5.78 No 0 0 No -42 0.92 Yes 40 74.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48009592 + NM_000179 MSH6 0 . . . 3.43 86.78 15 4.27 No -3 0.23 No 0 0 No -10 0.37 No 53 46.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1225207 + NM_000455 STK11 0 . . . 3.14 80.2 15 4.41 No 31 1.22 Yes 0 0 No -24 0.9 Yes 51 56.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68840865 + NM_004360 CDH1 0 . . . 3.73 75.11 38 9.03 Yes 19 0.22 No 0 0 No -35 0.57 No 39 96.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68460529 + NM_133509 RAD51B 0 . . . 6.62 80.61 14 4.17 No 64 1.52 Yes 0 0 No -21 0.86 Yes 48 60.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68689521 + NM_133509 RAD51B 0 . . . 1.19 67.67 53 6.79 Yes 28 0.59 No 0 0 No -28 0.59 No 21 70.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68784947 + NM_133509 RAD51B 0 . . . 5.95 89.29 38 6.54 Yes 6 0.43 No 0 0 No -23 0.48 No 42 56.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47670433 + NM_000251 MSH2 0 . . . 3.27 73.92 36 6.01 Yes 33 0.1 No 0 0 No -25 0.58 No 24 60.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131912291 + NM_005732 RAD50 0 . . . 5.26 81.7 25 6.16 Yes 56 0.77 No 0 0 No -24 0.9 Yes 44 37.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56797426 + NM_058216 RAD51C 0 . . . 5.61 81.75 19 4.83 No 47 1.7 Yes 0 0 No -30 0.27 No 50 65.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47667418 + NM_000251 MSH2 0 . . . 0.13 74.19 17 5.92 Yes 22 0.69 No 0 0 No -16 0.57 No 41 90.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48012801 + NM_000179 MSH6 0 . . . 0.62 66.04 13 5.76 Yes 60 0.64 No 0 0 No -28 0.8 Yes 37 54.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94170986 - NM_005591 MRE11 0 . . . 0.38 75.85 20 5.1 No 72 0.76 No 0 0 No -20 0.55 No 49 70.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68870362 + NM_004360 CDH1 0 . . . 1.59 72.48 24 4.9 No 59 0.93 Yes 0 0 No -23 0.87 Yes 47 72.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7564027 - NM_000546 TP53 0 . . . 1.41 84.22 10 4.8 No 33 1.51 Yes 0 0 No -24 0.64 No 25 36.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40989461 + NM_001164269 RAD51 0 . . . 0.52 68.06 23 5.39 No 52 0.03 No 0 0 No -22 0.83 Yes 48 76.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69136506 + NM_133509 RAD51B 0 . . . 6.05 74.46 11 4.12 No -2 0.18 No 0 0 No -23 0.46 No 38 73.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69144662 + NM_133509 RAD51B 0 . . . 4.21 71.42 41 6.49 Yes NA NA NA 0 0 No -40 0.88 Yes 37 91.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68471124 + NM_133509 RAD51B 0 . . . 2.39 0 41 6.32 Yes 15 0.05 No 0 0 No -37 0.58 No 24 66.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59813049 - NM_032043 BRIP1 0 . . . 0.74 0 32 6.45 Yes 15 0.89 Yes 0 0 No -31 0.68 Yes 38 72.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68645931 + NM_133509 RAD51B 0 . . . 4.29 70.74 17 4 No 10 0.51 No 0 0 No -37 0.84 Yes 41 72.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89623872 + NM_000314 PTEN 0 . . . 1.63 76.86 17 4.72 No 76 -0.82 No 0 0 No -31 0.4 No 10 15.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674171 + NM_000251 MSH2 0 . . . 2.1 0 34 5.64 Yes 73 0.8 Yes 0 0 No -22 0.53 No 47 66.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37059163 + NM_000249 MLH1 0 . . . 2.15 74.91 34 6 Yes 28 0.27 No 0 0 No -33 0.43 No 48 87.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56788596 + NM_058216 RAD51C 0 . . . 1.91 55.95 45 7.14 Yes 8 0.98 Yes 0 0 No -20 0.76 Yes 36 58.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90965393 - NM_002485 NBN 0 . . . 5.2 86.19 16 5.67 Yes 16 1.64 Yes 0 0 No -26 0.57 No 42 96.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215660182 - NM_000465 BARD1 0 . . . 6.52 82.79 43 6.86 Yes 38 0.27 No 0 0 No -29 0.67 Yes 43 78.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1205256 + NM_000455 STK11 0 . . . 3.84 70.76 20 4.47 No 14 1.67 Yes 0 0 No -22 0.77 Yes 44 92.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47753516 + NM_000251 MSH2 0 . . . 1.27 76.63 18 4.57 No 58 -3.88 No 0 0 No -17 0.4 No 43 70.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68812243 + NM_133509 RAD51B 0 . . . 1.34 66.38 27 5.28 No -3 0.3 No 0 0 No -26 0.9 Yes 35 53.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190689313 + NM_000534 PMS1 0 . . . 0.01 65.11 17 4.84 No 75 -2.65 No 0 0 No -27 0.47 No 14 79.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68720903 + NM_133509 RAD51B 0 . . . 1.95 84.28 20 5 No 40 0.22 No 0 0 No -26 0.91 Yes 43 72.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47797898 + NM_000251 MSH2 0 . . . 2.24 68.47 28 5.29 No 51 1.07 Yes 0 0 No -27 0.56 No 21 17.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90954528 - NM_002485 NBN 0 . . . 0.4 0 18 4.9 No 10 0.72 No 0 0 No -17 0.53 No 27 65.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32928720 + NM_000059 BRCA2 0 . . . 1.2 80.67 26 6.61 Yes 60 -4.2 No 0 0 No -26 0.62 No 33 52.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41009123 + NM_001164269 RAD51 0 . . . 3.61 68.34 20 4.9 No 23 1.58 Yes 0 0 No -19 0.4 No 45 66.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68856625 + NM_004360 CDH1 0 . . . 1.08 69.19 22 5.26 No 76 -1.28 No 0 0 No -21 0.68 Yes 18 64.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1221115 + NM_000455 STK11 0 . . . 1.6 78.99 35 6.37 Yes 32 -1.51 No 0 0 No -34 0.74 Yes 49 39.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75478717 - NM_001040108 MLH3 0 . . . 3.6 80.19 24 5.48 No 43 0.35 No 0 0 No -23 0.77 Yes 50 74.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68516263 + NM_133509 RAD51B 0 . . . 2.76 69.45 29 5.89 Yes -3 1.22 Yes 0 0 No -28 0.6 No 61 51.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75490167 - NM_001040108 MLH3 0 . . . 2.85 70.51 15 5.48 No 17 1.25 Yes 0 0 No -56 0.44 No 41 74.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47789107 + NM_000251 MSH2 0 . . . 6.33 79.98 15 3.99 No 66 -3.61 No 0 0 No -25 0.57 No 41 72.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68857708 + NM_004360 CDH1 0 . . . 5.21 73.49 27 5.01 No -2 0.22 No 0 0 No -57 0.41 No 41 36.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89688831 + NM_000314 PTEN 0 . . . 0.03 64.28 20 5.48 No 35 0.9 Yes 0 0 No -19 0.41 No 44 77.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68568031 + NM_133509 RAD51B 0 . . . 1.01 66.49 17 4.85 No 29 1.22 Yes 0 0 No -25 0.52 No 29 52.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59935215 - NM_032043 BRIP1 0 . . . 8 79.82 14 4.9 No 72 0.22 No 0 0 No -19 0.56 No 37 81.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131942642 + NM_005732 RAD50 0 . . . 3.52 67.34 20 5.07 No 64 -2.97 No 0 0 No -23 0.75 Yes 45 57.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68748147 + NM_133509 RAD51B 0 . . . 3.05 73.91 21 5.01 No 34 2.15 Yes 0 0 No -20 0.41 No 55 37.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190736562 + NM_000534 PMS1 0 . . . 1.09 66.06 48 7.11 Yes 1 0.09 No 0 0 No -26 0.55 No 48 56.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41019344 + NM_001164269 RAD51 0 . . . 5.73 69.95 35 7.06 Yes 67 1.13 Yes 0 0 No -34 0.53 No 39 72.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68551823 + NM_133509 RAD51B 0 . . . 9.24 82.51 26 6.15 Yes 34 -2.22 No 0 0 No -25 0.92 Yes 44 64.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215636365 - NM_000465 BARD1 0 . . . 2.95 70.07 35 5.58 Yes 19 0.99 Yes 0 0 No -21 0.33 No 39 89.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68978886 + NM_133509 RAD51B 0 . . . 1.15 69.56 61 7.58 Yes -2 0.29 No 0 0 No -29 0.64 No 47 43.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68733033 + NM_133509 RAD51B 0 . . . 3.36 67.07 21 7.21 Yes 64 0.31 No 0 0 No -20 0.81 Yes 42 54.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56799749 + NM_058216 RAD51C 0 . . . 1.19 0 67 7.49 Yes 23 0.1 No 0 0 No -27 0.45 No 35 69.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90995390 - NM_002485 NBN 0 . . . 6.6 83.45 63 5.47 No 16 0.97 Yes 0 0 No -40 0.46 No 51 63.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68984168 + NM_133509 RAD51B 0 . . . 1.05 76.83 18 3.21 No 75 0.43 No 0 0 No -17 0.53 No 50 58.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215590430 - NM_000465 BARD1 0 . . . 3.31 78.56 14 5.38 No 75 1.67 Yes 0 0 No -51 0.51 No 47 58.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190723958 + NM_000534 PMS1 0 . . . 3.4 68.49 19 5.48 No 72 0.7 No 0 0 No -28 0.69 Yes 47 77.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59820253 - NM_032043 BRIP1 0 . . . 4.95 74.64 33 5.91 Yes 33 0.9 Yes 0 0 No -32 0.69 Yes 46 69.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108117358 + NM_000051 ATM 0 . . . 0.4 0 26 5.48 No 8 0.84 Yes 0 0 No -25 0.95 Yes 38 31.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68532848 + NM_133509 RAD51B 0 . . . 4.82 85.32 19 5.56 Yes 15 0.15 No 0 0 No -26 0.76 Yes 47 47.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32947614 + NM_000059 BRCA2 0 . . . 1.82 69.25 41 5.9 Yes 58 -3.88 No 0 0 No -40 0.7 Yes 53 49.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68402879 + NM_133509 RAD51B 0 . . . 1.96 0 10 4.9 No 75 0.69 No 0 0 No -17 0.38 No 43 56.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52442909 - NM_004656 BAP1 0 . . . 1.67 0 18 5.51 No 55 1.26 Yes 0 0 No -31 0.33 No 26 93.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105197257 + NM_021930 RINT1 0 . . . 2.68 80.61 22 5.29 No 36 0.86 Yes 0 0 No -21 0.87 Yes 45 48.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131947369 + NM_005732 RAD50 0 . . . 0.09 76.63 32 4.77 No 67 -4.97 No 0 0 No -31 0.45 No 43 62.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94185336 - NM_005591 MRE11 0 . . . 3.67 84 26 5.48 No 2 1.5 Yes 0 0 No -25 0.77 Yes 12 43.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94194515 - NM_005591 MRE11 0 . . . 3.37 64.36 30 5.95 Yes 51 0.6 No 0 0 No -20 0.65 No 48 37.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68975162 + NM_133509 RAD51B 0 . . . 8.9 85.03 34 5.95 Yes 75 -4.28 No 0 0 No -33 0.93 Yes 47 82.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68689327 + NM_133509 RAD51B 0 . . . 3.9 69.24 40 6.97 Yes 48 -4.2 No 0 0 No -39 0.54 No 49 73.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68372104 + NM_133509 RAD51B 0 . . . 6.62 82.66 19 3.53 No 2 0.44 No 0 0 No -23 0.7 Yes 36 53.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32952673 + NM_000059 BRCA2 0 . . . 2.92 66.61 19 5.47 No 30 -1.84 No 0 0 No -18 0.3 No 47 77.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68689659 + NM_133509 RAD51B 0 . . . 2.78 70.83 24 5.3 No 23 0.8 Yes 0 0 No -28 0.69 Yes 35 55.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190741101 + NM_000534 PMS1 0 . . . 2.14 76.45 20 5.57 Yes 61 -5.71 No 0 0 No -19 0.72 Yes 43 62.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84408144 - NM_139076 FAM175A 0 . . . 4.45 78.6 35 5.17 No 9 1.79 Yes 0 0 No -35 0.41 No 32 90.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68412529 + NM_133509 RAD51B 0 . . . 2.78 76.46 25 4.9 No 56 -4.48 No 0 0 No -24 0.84 Yes 44 54.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94181177 - NM_005591 MRE11 0 . . . 3.38 0 23 4.9 No 48 0.73 No 0 0 No -22 0.92 Yes 50 86.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89687458 + NM_000314 PTEN 0 . . . 1.89 85.79 16 3.87 No 43 0.74 No 0 0 No -39 0.81 Yes 44 84.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37075883 + NM_000249 MLH1 0 . . . 0.05 65.96 24 5.89 Yes 25 -2.6 No 0 0 No -23 0.47 No 63 29.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29136721 - NM_001005735 CHEK2 0 . . . 0.06 0 41 6.77 Yes 76 1.12 Yes 0 0 No -30 0.85 Yes 40 53.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68576588 + NM_133509 RAD51B 0 . . . 1.12 0 23 4.69 No 72 0.98 Yes 0 0 No -60 0.21 No 57 42.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47649942 + NM_000251 MSH2 0 . . . 3.7 79.29 19 5 No 6 0.86 Yes 0 0 No -18 0.39 No 47 48.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75491526 - NM_001040108 MLH3 0 . . . 2.46 83.27 59 8.44 Yes 40 0.8 Yes 0 0 No -58 0.32 No 50 70.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131895687 + NM_005732 RAD50 0 . . . 3.1 74.6 26 5.61 Yes 34 0.14 No 0 0 No -25 0.78 Yes 36 47.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68459308 + NM_133509 RAD51B 0 . . . 3.23 67.27 62 8.13 Yes 56 0.51 No 0 0 No -16 0.54 No 39 71.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68868997 + NM_004360 CDH1 0 . . . 8.06 85.68 43 7.29 Yes 9 0.7 No 0 0 No -42 0.32 No 44 51.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68866493 + NM_133509 RAD51B 0 . . . 2.63 80.74 16 5.43 No 18 -1.4 No 0 0 No -23 0.88 Yes 45 62.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94174551 - NM_005591 MRE11 0 . . . 10.16 90.11 18 4.69 No 4 1.2 Yes 0 0 No -50 0.63 No 43 82.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94211352 - NM_005591 MRE11 0 . . . 9.97 84.59 27 5.2 No 60 0.95 Yes 0 0 No -26 0.43 No 42 77.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68676640 + NM_133509 RAD51B 0 . . . 2.97 78.27 22 3.81 No 44 0.95 Yes 0 0 No -21 0.73 Yes 47 80.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108111368 + NM_000051 ATM 0 . . . 0.19 61.85 34 5.97 Yes 32 0.71 No 0 0 No -33 0.76 Yes 36 38.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68298706 + NM_133509 RAD51B 0 . . . 5.04 74.29 20 5.1 No 55 0.32 No 0 0 No -19 0.5 No 45 56.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6036842 - NM_000535 PMS2 0 . . . 1.89 83.92 31 6.84 Yes 20 1.51 Yes 0 0 No -25 0.58 No 38 95.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6017799 - NM_000535 PMS2 0 . . . 1.84 68.29 28 5.19 No 22 0.21 No 0 0 No -21 0.5 No 52 37.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89661936 + NM_000314 PTEN 0 . . . 7.06 81.09 30 5.83 Yes 45 0.06 No 0 0 No -29 0.42 No 41 86.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131963414 + NM_005732 RAD50 0 . . . 1.12 68.55 12 4.68 No 2 0.78 Yes 0 0 No -21 0.18 No 33 37.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215661644 - NM_000465 BARD1 0 . . . 4.2 67.22 25 5.99 Yes 9 0.79 Yes 0 0 No -24 0.8 Yes 49 83.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68322078 + NM_133509 RAD51B 0 . . . 1.17 0 14 5.12 No 20 0.9 Yes 0 0 No -20 0.94 Yes 38 80.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68472268 + NM_133509 RAD51B 0 . . . 4.23 84.17 39 7.18 Yes 5 1.02 Yes 0 0 No -24 0.45 No 40 55.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68995958 + NM_133509 RAD51B 0 . . . 4.55 84 27 5.1 No 2 1.33 Yes 0 0 No -26 0.39 No 13 68.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215649870 - NM_000465 BARD1 0 . . . 0.6 0 9 3.87 No 16 -3.05 No 0 0 No -29 0.43 No 46 80.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152352601 - NM_005431 XRCC2 0 . . . 3.25 79.24 29 5.48 No 33 1.2 Yes 0 0 No -23 0.81 Yes 25 80.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68770773 + NM_133509 RAD51B 0 . . . 0.72 74.68 30 3.74 No 37 -3.48 No 0 0 No -25 0.79 Yes 47 89.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68755974 + NM_133509 RAD51B 0 . . . 3.63 78.43 32 5.66 Yes 76 1.04 Yes 0 0 No -31 0.91 Yes 47 63.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89701371 + NM_000314 PTEN 0 . . . 3.65 81.32 20 7.14 Yes 25 0.7 No 0 0 No -19 0.73 Yes 33 51.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47693008 + NM_000251 MSH2 0 . . . 6.05 72.14 16 5.04 No -2 0.94 Yes 0 0 No -20 0.49 No 46 85.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47664307 + NM_000251 MSH2 0 . . . 3.14 79.9 25 5.39 No 61 -5.86 No 0 0 No -24 0.31 No 47 28.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215664221 - NM_000465 BARD1 0 . . . 0.91 61.7 28 5.2 No 60 0.23 No 0 0 No -27 0.51 No 54 37.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68716720 + NM_133509 RAD51B 0 . . . 0.5 58.85 22 6.11 Yes 34 0.5 No 0 0 No -21 0.61 No 42 58.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68397969 + NM_133509 RAD51B 0 . . . 2.17 0 26 4.46 No 37 0.16 No 0 0 No -25 0.9 Yes 53 62.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59852014 - NM_032043 BRIP1 0 . . . 6.21 91.6 35 6.24 Yes 0 0.6 No 0 0 No -34 0.89 Yes 37 57.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41233884 - NM_007294 BRCA1 0 . . . 0.37 67.69 22 5.29 No 74 -5 No 0 0 No -52 0.45 No 58 34.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68530877 + NM_133509 RAD51B 0 . . . 3.03 75.7 13 4.97 No 32 0.76 No 0 0 No -44 0.64 No 45 65.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68442409 + NM_133509 RAD51B 0 . . . 2.67 76.03 27 5.91 Yes 58 -5.02 No 0 0 No -26 0.63 No 53 44.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68967740 + NM_133509 RAD51B 0 . . . 4.55 0 25 6.14 Yes 29 1.44 Yes 0 0 No -24 0.96 Yes 54 81.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68484097 + NM_133509 RAD51B 0 . . . 1.94 79.93 12 4.9 No 56 0.94 Yes 0 0 No -21 0.68 Yes 51 57.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47766487 + NM_000251 MSH2 0 . . . 5.52 76.86 33 5.97 Yes 70 0.62 No 0 0 No -32 0.4 No 44 96.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6045727 - NM_000535 PMS2 0 . . . 5.82 83.66 19 7.07 Yes 3 0.66 No 26 0.52 Yes -18 0.4 No 46 95.89 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 59819183 - NM_032043 BRIP1 0 . . . 3.72 67.15 27 5.39 No 65 1.89 Yes 0 0 No -29 0.82 Yes 47 95.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68711245 + NM_133509 RAD51B 0 . . . 6.54 72.35 30 4.73 No 5 0.94 Yes 0 0 No -22 0.65 No 49 88.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215648823 - NM_000465 BARD1 0 . . . 10 81.67 13 6.32 Yes 72 0.36 No 0 0 No -42 0.44 No 46 74.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68960062 + NM_133509 RAD51B 0 . . . 4.86 79.78 36 6.48 Yes 64 0.61 No 0 0 No -35 0.87 Yes 50 95.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105184639 + NM_021930 RINT1 0 . . . 7.97 81.99 39 6.28 Yes 0 0.81 Yes 0 0 No -20 0.39 No 50 61.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75518693 - NM_001040108 MLH3 0 . . . 0.97 73.77 16 5.29 No -4 0.38 No 0 0 No -21 0.72 Yes 48 75.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108235755 + NM_000051 ATM 0 . . . 4.32 72.35 20 4.66 No 62 0.98 Yes 0 0 No -19 0.52 No 38 62.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29116785 - NM_001005735 CHEK2 0 . . . 6.74 87.02 38 9 Yes 55 -2.76 No 0 0 No -37 0.49 No 49 55.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75497181 - NM_001040108 MLH3 0 . . . 9.35 86.5 27 5.57 Yes 8 1.96 Yes 0 0 No -26 0.69 Yes 50 62.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105202799 + NM_021930 RINT1 0 . . . 4.2 78.41 20 6.43 Yes 16 1.12 Yes 0 0 No -31 0.38 No 42 93.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47697412 + NM_000251 MSH2 0 . . . 3.15 68.34 59 7.91 Yes 23 1.57 Yes 0 0 No -43 0.54 No 40 73.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68385964 + NM_133509 RAD51B 0 . . . 0.99 0 24 4.89 No 68 0.57 No 0 0 No -23 0.88 Yes 54 26.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47693158 + NM_000251 MSH2 0 . . . 7.35 76.56 20 6.44 Yes 12 0.45 No 0 0 No -29 0.46 No 38 60.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108160991 + NM_000051 ATM 0 . . . 4.86 77.07 20 4.83 No 28 0.97 Yes 0 0 No -20 0.7 Yes 44 56.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131957933 + NM_005732 RAD50 0 . . . 5.02 79.06 22 7.11 Yes 64 0.41 No 0 0 No -21 0.33 No 44 74.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68861645 + NM_133509 RAD51B 0 . . . 8.35 86.11 20 5.09 No 12 2.18 Yes 0 0 No -34 0.35 No 46 96.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68851580 + NM_133509 RAD51B 0 . . . 4.32 77.28 23 7.19 Yes 44 1.26 Yes 0 0 No -22 0.96 Yes 45 97.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47790448 + NM_000251 MSH2 0 . . . 4.12 81.61 20 4.34 No 72 0.8 Yes 0 0 No -38 0.48 No 38 34.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59847347 - NM_032043 BRIP1 0 . . . 1.12 59.28 34 6.32 Yes 39 0.5 No 0 0 No -33 0.66 Yes 29 70.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68438849 + NM_133509 RAD51B 0 . . . 2.04 70.81 22 5.13 No 40 2.14 Yes 0 0 No -28 0.3 No 46 87.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190666261 + NM_000534 PMS1 0 . . . 2.5 69.92 19 5 No 11 0.54 No 0 0 No -26 0.6 No 47 51.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90963372 - NM_002485 NBN 0 . . . 1.61 72.46 18 4.9 No 8 1.13 Yes 0 0 No -32 0.44 No 50 70.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90955714 - NM_002485 NBN 0 . . . 7.83 85.32 34 5.76 Yes 2 1.38 Yes 0 0 No -27 0.51 No 47 69.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69028157 + NM_133509 RAD51B 0 . . . 1.57 83.29 20 4.56 No 63 -4.6 No 0 0 No -19 0.79 Yes 52 45.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89621350 + NM_000314 PTEN 0 . . . 2.86 75.5 21 6.55 Yes 74 0.01 No 0 0 No -24 0.34 No 48 48.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68807130 + NM_004360 CDH1 0 . . . 4.07 69 14 5.74 Yes 66 -0.89 No 0 0 No -27 0.44 No 46 72.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47786880 + NM_000251 MSH2 0 . . . 7.6 82.46 19 4.18 No 8 1.07 Yes 0 0 No -56 0.7 Yes 42 66.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68781558 + NM_004360 CDH1 0 . . . 6.92 88.86 28 5.38 No 36 0.16 No 0 0 No -27 0.68 Yes 47 74.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89671721 + NM_000314 PTEN 0 . . . 5.19 84.17 21 6.02 Yes 52 0.6 No 0 0 No -20 0.54 No 44 47.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68539140 + NM_133509 RAD51B 0 . . . 0.31 0 32 5.74 Yes 53 -2.68 No 0 0 No -57 0.39 No 49 33.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144173 + NM_133509 RAD51B 0 . . . 6.87 76.89 30 5.03 No 52 0.59 No 0 0 No -24 0.69 Yes 32 71.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68831370 + NM_133509 RAD51B 0 . . . 4.32 86.37 23 6.48 Yes 54 0.71 No 0 0 No -30 0.81 Yes 43 57.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68830357 + NM_004360 CDH1 0 . . . 7.09 77.96 28 6.22 Yes -3 0.59 No 0 0 No -25 0.31 No 37 81.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41228858 - NM_007294 BRCA1 0 . . . 6.26 74.66 15 4.33 No 20 0.82 Yes 0 0 No -20 0.55 No 38 96.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90983566 - NM_002485 NBN 0 . . . 3.6 68.25 15 6.16 Yes 9 0.65 No 0 0 No -31 0.66 Yes 49 94.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190670078 + NM_000534 PMS1 0 . . . 6.6 89.69 16 5.38 No 15 0.21 No 0 0 No -22 0.39 No 47 75.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41233217 - NM_007294 BRCA1 0 . . . 6.59 84.14 26 6.56 Yes 62 1.17 Yes 0 0 No -25 0.59 No 44 82.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68786804 + NM_133509 RAD51B 0 . . . 7.03 71.21 27 5.65 Yes -2 0.14 No 0 0 No -26 0.41 No 39 82.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68772711 + NM_004360 CDH1 0 . . . 3.49 82.06 17 4.8 No 4 1.44 Yes 0 0 No -36 0.48 No 46 88.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69067282 + NM_133509 RAD51B 0 . . . 2.1 72.59 17 4.94 No 4 0.1 No 0 0 No -29 0.51 No 48 53.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47734289 + NM_000251 MSH2 0 . . . 7.89 79.7 22 7.25 Yes NA NA NA 0 0 No -21 0.87 Yes 38 8.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190713629 + NM_000534 PMS1 0 . . . 0.9 65.5 27 5.46 No 15 0.63 No 0 0 No -26 0.9 Yes 43 75.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68369508 + NM_133509 RAD51B 0 . . . 3.3 74.48 21 5.1 No 50 -3.4 No 0 0 No -20 0.73 Yes 44 90.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68584845 + NM_133509 RAD51B 0 . . . 3.1 76.36 36 5.89 Yes 36 0.47 No 0 0 No -22 0.69 Yes 48 85.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68740283 + NM_133509 RAD51B 0 . . . 5.01 85.09 33 4.02 No 65 -5.59 No 0 0 No -27 0.4 No 48 85.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41226655 - NM_007294 BRCA1 0 . . . 5.97 88.49 22 6.08 Yes 64 -3.82 No 0 0 No -21 0.67 Yes 41 80.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68958767 + NM_133509 RAD51B 0 . . . 1.33 0 35 6.24 Yes 53 1.29 Yes 0 0 No -34 0.51 No 48 50.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68470704 + NM_133509 RAD51B 0 . . . 4.02 66.86 15 4.58 No 45 0.6 No 0 0 No -57 0.83 Yes 39 59.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68871220 + NM_004360 CDH1 0 . . . 2.19 72.26 18 4.9 No 61 0.42 No 0 0 No -17 0.52 No 47 25.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68823417 + NM_133509 RAD51B 0 . . . 1.83 54.59 27 5.74 Yes 70 -3.65 No 0 0 No -26 0.76 Yes 44 39.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215643327 - NM_000465 BARD1 0 . . . 7.92 80.72 17 5.57 Yes 27 0.31 No 0 0 No -24 0.6 No 48 90.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47756682 + NM_000251 MSH2 0 . . . 4.36 79.62 20 5.44 No 44 1.32 Yes 0 0 No -30 0.84 Yes 41 84.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68922070 + NM_133509 RAD51B 0 . . . 1.32 78.3 37 6.36 Yes 62 -5.39 No 0 0 No -31 0.63 No 48 33.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59758140 - NM_032043 BRIP1 0 . . . 8.33 71.6 30 5.25 No 62 0.25 No 0 0 No -22 0.73 Yes 41 52.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59918472 - NM_032043 BRIP1 0 . . . 3.74 82.89 34 6.88 Yes 18 1.23 Yes 0 0 No -33 0.75 Yes 40 82.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108112407 + NM_000051 ATM 0 . . . 6.03 80.85 15 4.58 No 27 0.31 No 0 0 No -42 0.37 No 43 83.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47768213 + NM_000251 MSH2 0 . . . 3.07 75.15 24 4.9 No 30 1.26 Yes 0 0 No -48 0.41 No 46 63.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68860163 + NM_133509 RAD51B 0 . . . 3.07 70.55 32 6.26 Yes 6 -1.56 No 0 0 No -31 0.83 Yes 36 82.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75513777 - NM_001040108 MLH3 0 . . . 6.49 80.92 21 5.2 No 11 0.84 Yes 0 0 No -20 0.73 Yes 47 69.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190657799 + NM_000534 PMS1 0 . . . 2.66 68.34 30 5.35 No 23 1.56 Yes 0 0 No -20 0.64 No 40 67.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84395477 - NM_139076 FAM175A 0 . . . 0.42 0 49 6.84 Yes 15 0.79 Yes 0 0 No -42 0.33 No 43 48.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90985978 - NM_002485 NBN 0 . . . 4.7 0 37 6.14 Yes 24 1.84 Yes 0 0 No -31 0.51 No 34 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29136989 - NM_001005735 CHEK2 0 . . . 2.5 63.04 24 4.8 No 56 0.05 No 0 0 No -23 0.38 No 44 57.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68797742 + NM_133509 RAD51B 0 . . . 4.12 72.25 37 5.47 No 60 -3.32 No 0 0 No -25 0.76 Yes 40 85.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131911330 + NM_005732 RAD50 0 . . . 4.18 71.91 18 4.47 No 15 0.27 No 0 0 No -22 0.5 No 43 64.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68758673 + NM_133509 RAD51B 0 . . . 3.03 80.84 19 4.19 No 65 0.56 No 0 0 No -21 0.59 No 49 86.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69076051 + NM_133509 RAD51B 0 . . . 9.66 83.31 17 6.08 Yes 40 1.1 Yes 0 0 No -16 0.81 Yes 46 89.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68317043 + NM_133509 RAD51B 0 . . . 6.02 91.93 39 6.68 Yes 48 -2.23 No 0 0 No -38 0.4 No 44 77.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89705555 + NM_000314 PTEN 0 . . . 1.87 72.56 33 5.8 Yes -3 0.17 No 0 0 No -32 0.83 Yes 46 72.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94158699 - NM_005591 MRE11 0 . . . 2.15 77.39 50 4.79 No 44 0.39 No 0 0 No -37 0.67 Yes 42 78.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104179059 - NM_001100119 XRCC3 0 . . . 2.22 0 19 4.69 No 12 0.47 No 0 0 No -21 0.59 No 46 83.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68841794 + NM_133509 RAD51B 0 . . . 2.52 73.82 32 5.66 Yes 70 0.22 No 0 0 No -31 0.77 Yes 49 83.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131952689 + NM_005732 RAD50 0 . . . 6.74 91.82 17 6.56 Yes 43 0.87 Yes 0 0 No -27 0.6 No 45 82.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68843099 + NM_133509 RAD51B 0 . . . 3.74 73.91 28 4.95 No 17 0.33 No 0 0 No -19 0.69 Yes 41 63.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68306478 + NM_133509 RAD51B 0 . . . 5.28 70.67 16 6.86 Yes 2 0.59 No 0 0 No -29 0.53 No 25 75.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68688057 + NM_133509 RAD51B 0 . . . 0.75 58.37 19 4.96 No 75 -5.89 No 0 0 No -22 0.63 No 49 22.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680233 + NM_000251 MSH2 0 . . . 3.06 68.08 33 6.22 Yes 39 -4.26 No 0 0 No -27 0.5 No 51 46.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69101229 + NM_133509 RAD51B 0 . . . 3.04 0 22 5.2 No 29 0.68 No 0 0 No -21 0.6 No 29 84.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215620386 - NM_000465 BARD1 0 . . . 4.26 80.17 18 3.82 No 74 0.24 No 0 0 No -23 0.64 No 50 67.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152352932 - NM_005431 XRCC2 0 . . . 4.5 85.02 24 5.26 No 65 1.04 Yes 0 0 No -23 0.89 Yes 48 71.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56778621 + NM_058216 RAD51C 0 . . . 2.97 74.68 39 6.4 Yes 9 1.55 Yes 0 0 No -38 0.68 Yes 49 63.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6036398 - NM_000535 PMS2 0 . . . 0.03 0 16 4.2 No 16 0.36 No 0 0 No -41 0.78 Yes 56 46.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68849336 + NM_004360 CDH1 0 . . . 0.76 67.64 32 6.62 Yes 63 0.29 No 0 0 No -31 0.52 No 55 38.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56768518 + NM_058216 RAD51C 0 . . . 1.46 70.27 37 6.16 Yes 57 0.16 No 0 0 No -36 0.84 Yes 44 19.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152342763 - NM_005431 XRCC2 0 . . . 2.14 71.44 18 4.9 No 71 -3.6 No 0 0 No -48 0.58 No 43 53.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190693062 + NM_000534 PMS1 0 . . . 1.05 71.84 30 7.07 Yes 47 0.45 No 0 0 No -29 0.88 Yes 41 40.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68987380 + NM_133509 RAD51B 0 . . . 8.38 81.52 19 4.97 No 51 0.47 No 0 0 No -18 0.41 No 30 36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32956527 + NM_000059 BRCA2 0 . . . 1.45 63.5 29 5.93 Yes 37 0.6 No 0 0 No -28 0.56 No 40 35.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29128744 - NM_001005735 CHEK2 0 . . . 4.69 82.26 31 4.34 No 18 -3.31 No 0 0 No -26 0.69 Yes 41 48.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68898510 + NM_133509 RAD51B 0 . . . 6.36 77.1 22 4.9 No 64 0.76 No 0 0 No -21 0.91 Yes 47 83.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32907554 + NM_000059 BRCA2 0 . . . 6.87 79.27 30 5.48 No 24 1.41 Yes 0 0 No -23 0.42 No 34 90.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47805349 + NM_000251 MSH2 0 . . . 5.1 77.06 18 4.8 No 6 1.08 Yes 0 0 No -26 0.8 Yes 43 73.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68549414 + NM_133509 RAD51B 0 . . . 5.23 75.91 17 5.29 No 44 -1.45 No 0 0 No -21 0.65 No 19 78.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6020530 - NM_000535 PMS2 0 . . . 4.71 75.59 28 6.24 Yes 5 0.91 Yes 0 0 No -25 0.46 No 53 80.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68568519 + NM_133509 RAD51B 0 . . . 0.81 0 22 5.82 Yes 1 0.18 No 0 0 No -21 0.77 Yes 57 67.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190680144 + NM_000534 PMS1 0 . . . 4.19 74.33 19 4.8 No 4 1.2 Yes 0 0 No -19 0.93 Yes 39 48.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6024662 - NM_000535 PMS2 0 . . . 3.07 70.18 19 5.91 Yes 21 0.54 No 0 0 No -18 0.62 No 37 71.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59824850 - NM_032043 BRIP1 0 . . . 6.95 82.11 28 5.1 No 26 0.18 No 0 0 No -20 0.54 No 41 47.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344566 + NM_133509 RAD51B 0 . . . 5.97 80.84 22 6.18 Yes 9 0.38 No 0 0 No -21 0.97 Yes 49 95.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94183548 - NM_005591 MRE11 0 . . . 6.59 70.04 29 5.59 Yes 55 -3.39 No 0 0 No -28 0.58 No 37 43.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68495313 + NM_133509 RAD51B 0 . . . 5.49 76.37 31 6 Yes 16 1.25 Yes 0 0 No -30 0.85 Yes 42 90.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89638240 + NM_000314 PTEN 0 . . . 1.15 77.86 18 4.9 No 7 0.7 No 0 0 No -26 0.48 No 51 41.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108190408 + NM_000051 ATM 0 . . . 5.9 71.31 12 5.39 No 21 1.58 Yes 0 0 No -28 0.3 No 37 90.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68880390 + NM_133509 RAD51B 0 . . . 6.59 87.81 19 5.57 Yes 8 1.62 Yes 0 0 No -56 0.5 No 50 61.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69008546 + NM_133509 RAD51B 0 . . . 2.7 82.18 17 4.8 No 28 0.22 No 0 0 No -16 0.56 No 50 84.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32903171 + NM_000059 BRCA2 0 . . . 4.79 75.57 32 5.56 Yes 7 1.5 Yes 0 0 No -31 0.58 No 51 58.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47659439 + NM_000251 MSH2 0 . . . 8.08 75.77 14 5.2 No 21 0.6 No 0 0 No -20 0.38 No 44 83.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41197899 - NM_007294 BRCA1 0 . . . 2.5 74.34 22 4.9 No 12 -2.13 No 0 0 No -21 0.7 Yes 47 53.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32915514 + NM_000059 BRCA2 0 . . . 3.66 81.97 20 5.42 No 76 0.28 No 0 0 No -24 0.43 No 47 58.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59764896 - NM_032043 BRIP1 0 . . . 10.22 91.31 28 7.18 Yes 43 0.43 No 0 0 No -27 0.4 No 49 63.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41273509 - NM_007294 BRCA1 0 . . . 4.35 79.86 30 5.92 Yes 32 0.99 Yes 0 0 No -30 0.56 No 21 48.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152366204 - NM_005431 XRCC2 0 . . . 2.87 80.04 24 8 Yes 29 0.61 No 0 0 No -23 0.86 Yes 52 66.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215602111 - NM_000465 BARD1 0 . . . 3.52 0 22 4.31 No 18 0.68 No 0 0 No -57 0.61 No 40 52.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84401013 - NM_139076 FAM175A 0 . . . 0.31 81.72 30 4.58 No 21 0.54 No 0 0 No -29 0.43 No 50 86.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68819552 + NM_004360 CDH1 0 . . . 8.65 77.42 53 6.91 Yes 60 0.84 Yes 0 0 No -46 0.81 Yes 47 78.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68760437 + NM_133509 RAD51B 0 . . . 4.53 74.2 13 6.19 Yes 15 0.28 No 0 0 No -21 0.64 No 43 93.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84406986 - NM_139076 FAM175A 0 . . . 5.09 82.25 19 4.69 No 20 0.98 Yes 0 0 No -18 0.45 No 38 82.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90958849 - NM_002485 NBN 0 . . . 0.65 70.65 24 5.91 Yes 6 0.71 No 0 0 No -23 0.92 Yes 52 48.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69032432 + NM_133509 RAD51B 0 . . . 3.63 78.11 24 4.18 No 63 1.7 Yes 0 0 No -24 0.68 Yes 46 72.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68352747 + NM_133509 RAD51B 0 . . . 2.64 69.91 23 4.14 No 76 0.37 No 0 0 No -25 0.78 Yes 59 53.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94219514 - NM_005591 MRE11 0 . . . 2.7 62.67 20 5.1 No 13 0.92 Yes 0 0 No -19 0.83 Yes 45 76.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68926274 + NM_133509 RAD51B 0 . . . 3.5 79.96 17 5.29 No 32 0.11 No 0 0 No -16 0.33 No 26 81.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89706632 + NM_000314 PTEN 0 . . . 0.43 72.48 21 4.14 No 47 0.16 No 0 0 No -31 0.55 No 63 33.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32895973 + NM_000059 BRCA2 0 . . . 6.56 70.3 32 4.82 No 18 0.79 Yes 0 0 No -31 0.69 Yes 40 91.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68794350 + NM_004360 CDH1 0 . . . 0.92 0 24 5.25 No 16 0.75 No 0 0 No -23 0.66 No 42 81.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68352276 + NM_133509 RAD51B 0 . . . 4.24 69.17 31 5.91 Yes 2 0.4 No 0 0 No -30 0.91 Yes 48 91.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68294559 + NM_133509 RAD51B 0 . . . 4.85 76.62 24 5.99 Yes 10 0.86 Yes 0 0 No -23 0.9 Yes 48 76.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94175395 - NM_005591 MRE11 0 . . . 2.21 73.91 18 4.9 No 68 1.69 Yes 0 0 No -44 0.46 No 50 72.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69095464 + NM_133509 RAD51B 0 . . . 7.78 85.9 16 5.1 No 66 -1.9 No 0 0 No -44 0.33 No 35 67.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108111726 + NM_000051 ATM 0 . . . 7.68 80.39 22 5.26 No 70 1.18 Yes 0 0 No -21 0.79 Yes 41 57.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68986508 + NM_133509 RAD51B 0 . . . 5.7 93.7 16 4.58 No 18 -1.6 No 0 0 No -15 0.39 No 52 65.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68996044 + NM_133509 RAD51B 0 . . . 0.23 0 20 7.5 Yes 45 1.18 Yes 0 0 No -19 0.27 No 13 72.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190693765 + NM_000534 PMS1 0 . . . 1.77 68.04 16 4.58 No 28 1.03 Yes 0 0 No -20 0.78 Yes 30 87.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29095551 - NM_001005735 CHEK2 0 . . . 2.01 62.35 47 6.65 Yes -2 1.04 Yes 0 0 No -32 0.75 Yes 48 36.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47694133 + NM_000251 MSH2 0 . . . 1.07 69.71 28 5.29 No 18 0.19 No 0 0 No -23 0.46 No 40 69.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131906639 + NM_005732 RAD50 0 . . . 5.25 69.15 18 5.13 No 13 1.3 Yes 0 0 No -27 0.79 Yes 45 81.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215648698 - NM_000465 BARD1 0 . . . 1.68 64.42 27 3.58 No 27 -1.85 No 0 0 No -26 0.52 No 55 50.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41195504 - NM_007294 BRCA1 0 . . . 1.5 72.56 25 5.29 No 73 0.2 No 0 0 No -24 0.89 Yes 44 86.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59927136 - NM_032043 BRIP1 0 . . . 0.54 65.65 17 4.8 No 55 0.06 No 0 0 No -16 0.49 No 52 35.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680999 + NM_000251 MSH2 0 . . . 7.13 76.91 28 5.22 No 20 0.74 No 0 0 No -27 0.86 Yes 43 78.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59794759 - NM_032043 BRIP1 0 . . . 0.25 69.55 26 4.89 No -3 0.35 No 0 0 No -25 0.51 No 44 47.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68502943 + NM_133509 RAD51B 0 . . . 5.22 81.85 38 6.28 Yes 54 -2.89 No 0 0 No -37 0.64 No 39 64.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37090538 + NM_000249 MLH1 0 . . . 2.74 77.93 20 4.47 No 44 0.02 No 0 0 No -39 0.69 Yes 44 65.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47688596 + NM_000251 MSH2 0 . . . 4.35 65.75 34 5.92 Yes 54 0.6 No 0 0 No -33 0.83 Yes 49 81.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215604710 - NM_000465 BARD1 0 . . . 1.04 61.62 33 5.62 Yes 18 0.38 No 0 0 No -23 0.61 No 40 52.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68477093 + NM_133509 RAD51B 0 . . . 2.54 0 21 7.21 Yes 73 0.21 No 0 0 No -20 0.88 Yes 47 38.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59768054 - NM_032043 BRIP1 0 . . . 6.99 79.07 19 4.58 No 41 0.59 No 0 0 No -18 0.81 Yes 32 65.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37077903 + NM_000249 MLH1 0 . . . 1.76 64.19 20 5.48 No -4 0.48 No 0 0 No -20 0.63 No 43 28.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68774518 + NM_004360 CDH1 0 . . . 4.5 75.03 13 5.79 Yes 9 1.44 Yes 0 0 No -35 0.63 No 40 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47706273 + NM_000251 MSH2 0 . . . 1.64 68.43 10 4.9 No 14 -2.62 No 0 0 No -19 0.4 No 50 73.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68308088 + NM_133509 RAD51B 0 . . . 8.74 84.16 14 5 No 70 0.65 No 0 0 No -18 0.33 No 48 63.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68351764 + NM_133509 RAD51B 0 . . . 6.88 82.06 10 4.25 No 48 -1.43 No 0 0 No -23 0.57 No 53 69.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68370438 + NM_133509 RAD51B 0 . . . 0.41 0 22 4.8 No 42 1.2 Yes 0 0 No -21 0.84 Yes 16 61.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29117985 - NM_001005735 CHEK2 0 . . . 0.6 74.68 34 4.81 No 54 0.01 No 0 0 No -24 0.79 Yes 54 80.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68384996 + NM_133509 RAD51B 0 . . . 3.59 84.79 36 7.19 Yes 2 1.51 Yes 0 0 No -36 0.78 Yes 22 58.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68528867 + NM_133509 RAD51B 0 . . . 0.27 69.94 12 4.24 No 48 1.14 Yes 0 0 No -35 0.67 Yes 42 63.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69150486 + NM_133509 RAD51B 0 . . . 1.22 72.33 22 6.53 Yes 48 -0.73 No 0 0 No -21 0.96 Yes 22 73.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68302754 + NM_133509 RAD51B 0 . . . 5.06 77.81 21 4.9 No 33 0.55 No 0 0 No -20 0.89 Yes 50 59.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59827282 - NM_032043 BRIP1 0 . . . 2.23 57.91 39 6.34 Yes 26 0.54 No 0 0 No -21 0.59 No 42 76.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90990332 - NM_002485 NBN 0 . . . 3.61 75.64 21 7.21 Yes 25 1.03 Yes 0 0 No -20 0.89 Yes 52 71.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68800749 + NM_004360 CDH1 0 . . . 0.31 81.72 23 4.99 No 76 1.48 Yes 0 0 No -23 0.61 No 25 47.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32914673 + NM_000059 BRCA2 0 . . . 1.18 0 13 4.9 No 19 0.71 No 0 0 No -22 0.53 No 44 79.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68999867 + NM_133509 RAD51B 0 . . . 3.56 80.6 45 5.84 Yes 75 -2.93 No 0 0 No -26 0.83 Yes 45 80.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68466915 + NM_133509 RAD51B 0 . . . 1.85 64.01 12 4.71 No 12 1.55 Yes 0 0 No -53 0.41 No 46 89.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47763735 + NM_000251 MSH2 0 . . . 1.69 0 30 6.4 Yes 70 0.65 No 0 0 No -29 0.8 Yes 53 45.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89722877 + NM_000314 PTEN 0 . . . 4.88 66.26 39 6.24 Yes 23 1.49 Yes 0 0 No -38 0.55 No 35 48.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104173697 - NM_001100119 XRCC3 0 . . . 9.13 80.04 42 5.44 No 45 2.17 Yes 0 0 No -26 0.89 Yes 25 86.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94187706 - NM_005591 MRE11 0 . . . 1.53 0 18 6.11 Yes 45 0.49 No 0 0 No -17 0.46 No 28 65.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69119715 + NM_133509 RAD51B 0 . . . 2.92 72.94 24 4.22 No 29 0.96 Yes 0 0 No -19 0.5 No 46 85.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94228039 - NM_005591 MRE11 0 . . . 3.76 71.11 22 6.01 Yes 58 -4.08 No 0 0 No -22 0.72 Yes 39 71.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152360115 - NM_005431 XRCC2 0 . . . 2.53 0 22 4.5 No 53 1.31 Yes 0 0 No -21 0.52 No 46 65.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68784187 + NM_133509 RAD51B 0 . . . 1.71 77.21 22 4.98 No 40 -4.15 No 0 0 No -21 0.73 Yes 50 39.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75503687 - NM_001040108 MLH3 0 . . . 3.25 67.93 41 8.14 Yes 76 0.91 Yes 0 0 No -45 0.47 No 46 63.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59852961 - NM_032043 BRIP1 0 . . . 1.72 65.56 20 6 Yes 28 1.22 Yes 0 0 No -19 0.7 Yes 30 62.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32948742 + NM_000059 BRCA2 0 . . . 4.78 79.75 18 4.73 No 65 1.29 Yes 0 0 No -17 0.54 No 49 70.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89718765 + NM_000314 PTEN 0 . . . 0.47 0 19 4.9 No 62 0.6 No 0 0 No -26 0.88 Yes 44 69.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69030198 + NM_133509 RAD51B 0 . . . 2.81 69.49 31 5.34 No 52 -4.84 No 0 0 No -24 0.51 No 40 81.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68630557 + NM_133509 RAD51B 0 . . . 1.44 61.24 16 6 Yes 65 0.73 No 0 0 No -27 0.35 No 39 44.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23653596 - NM_024675 PALB2 0 . . . 5.23 72.15 29 5.57 Yes 9 1.43 Yes 0 0 No -28 0.43 No 39 52.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6047542 - NM_000535 PMS2 0 . . . 2.11 79.46 42 6.92 Yes 75 -4.72 No 0 0 No -34 0.76 Yes 53 58.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29098364 - NM_001005735 CHEK2 0 . . . 2.1 68.31 18 4.69 No 56 1.22 Yes 0 0 No -20 0.73 Yes 42 65.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68423632 + NM_133509 RAD51B 0 . . . 0.26 0 29 6.32 Yes 29 0.42 No 0 0 No -28 0.91 Yes 41 71.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89666670 + NM_000314 PTEN 0 . . . 2.34 71.07 20 4.03 No 19 0.74 No 0 0 No -23 0.57 No 39 97.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7576263 - NM_000546 TP53 0 . . . 7.78 85.4 27 5.2 No 20 1.44 Yes 0 0 No -48 0.44 No 38 95.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68819450 + NM_133509 RAD51B 0 . . . 1.48 82.99 24 3.76 No 40 0.27 No 0 0 No -24 0.39 No 45 63.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68892880 + NM_133509 RAD51B 0 . . . 5.17 86.2 34 5.96 Yes 9 1.18 Yes 0 0 No -33 0.63 No 49 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89655786 + NM_000314 PTEN 0 . . . 8.01 85.18 28 4.25 No 56 0.18 No 0 0 No -27 0.48 No 45 79.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68779069 + NM_133509 RAD51B 0 . . . 8.57 77.47 15 4.47 No 24 1.24 Yes 0 0 No -28 0.86 Yes 34 53.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37057085 + NM_000249 MLH1 0 . . . 0.79 82.68 74 7.08 Yes 66 1.38 Yes 0 0 No -30 0.63 No 49 60.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47788029 + NM_000251 MSH2 0 . . . 7.79 80.21 22 5.94 Yes 45 -1.8 No 0 0 No -21 0.91 Yes 37 34.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68447458 + NM_133509 RAD51B 0 . . . 3.95 69.47 19 4.98 No -1 0.81 Yes 0 0 No -18 0.37 No 18 55.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89680007 + NM_000314 PTEN 0 . . . 3.82 68.39 23 5.2 No 62 -5.28 No 0 0 No -22 0.65 No 45 37.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89625551 + NM_000314 PTEN 0 . . . 2.78 0 15 5.39 No 62 -5.9 No 0 0 No -22 0.72 Yes 40 79.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59862560 - NM_032043 BRIP1 0 . . . 2.57 81.7 20 5.1 No 67 0.69 No 0 0 No -23 0.49 No 49 66.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68771589 + NM_004360 CDH1 0 . . . 8.51 81.88 43 5.6 Yes 43 -1.05 No 0 0 No -42 0.81 Yes 45 53.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152346063 - NM_005431 XRCC2 0 . . . 1.61 81.59 39 7.11 Yes 40 0.16 No 0 0 No -25 0.53 No 53 17.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108200665 + NM_000051 ATM 0 . . . 2.73 76.19 28 5.47 No 4 0.47 No 0 0 No -27 0.52 No 45 48.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68437150 + NM_133509 RAD51B 0 . . . 2.87 66.16 9 4.8 No 64 -3.41 No 0 0 No -17 0.76 Yes 48 58.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68769671 + NM_004360 CDH1 0 . . . 4.71 84.22 34 6.71 Yes 33 1.04 Yes 0 0 No -33 0.84 Yes 50 90.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68963333 + NM_133509 RAD51B 0 . . . 2.32 0 28 6.32 Yes 70 1.45 Yes 0 0 No -27 0.85 Yes 52 77.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32896699 + NM_000059 BRCA2 0 . . . 1.07 74.23 43 7 Yes 68 -5.09 No 0 0 No -42 0.79 Yes 50 97.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104163783 - NM_001100119 XRCC3 0 . . . 3.22 74.25 48 7.74 Yes 6 1.23 Yes 0 0 No -20 0.52 No 46 79.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47657218 + NM_000251 MSH2 0 . . . 3.58 87.56 15 8.19 Yes 38 1.57 Yes 0 0 No -14 0.41 No 41 74.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68793653 + NM_004360 CDH1 0 . . . 3.49 70.85 24 5.83 Yes 19 1.08 Yes 0 0 No -56 0.41 No 39 73.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104178360 - NM_001100119 XRCC3 0 . . . 4.28 72.74 34 7.74 Yes 63 -2.4 No 0 0 No -25 0.69 Yes 45 42.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68897416 + NM_133509 RAD51B 0 . . . 6.07 81.13 11 4 No 70 0.91 Yes 0 0 No -23 0.78 Yes 41 64.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104170232 - NM_001100119 XRCC3 0 . . . 5.54 80.85 36 6.43 Yes 42 0.89 Yes 0 0 No -29 0.64 No 52 72.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68644121 + NM_133509 RAD51B 0 . . . 4.78 78.76 28 5.2 No 6 0.83 Yes 0 0 No -27 0.65 No 46 49.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68627855 + NM_133509 RAD51B 0 . . . 0.1 0 23 4.69 No 6 0.75 No 0 0 No -58 0.79 Yes 34 77.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59866379 - NM_032043 BRIP1 0 . . . 6.5 86.2 12 5.39 No 14 0.24 No 0 0 No -26 0.45 No 39 62.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68321237 + NM_133509 RAD51B 0 . . . 3.98 75.99 29 5.88 Yes 53 0.73 No 0 0 No -28 0.85 Yes 52 75.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90998178 - NM_002485 NBN 0 . . . 7.78 83.12 28 5.74 Yes 43 0.66 No 0 0 No -28 0.77 Yes 42 79.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68394142 + NM_133509 RAD51B 0 . . . 2.54 63.77 35 6.24 Yes 45 0.85 Yes 0 0 No -34 0.62 No 45 59.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89669745 + NM_000314 PTEN 0 . . . 10.61 92.61 44 6.55 Yes 11 0.47 No 0 0 No -22 0.65 No 47 91.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89698046 + NM_000314 PTEN 0 . . . 5.96 86.9 35 6.75 Yes 73 1.09 Yes 0 0 No -34 0.83 Yes 43 84.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131932477 + NM_005732 RAD50 0 . . . 3.89 68.97 28 5.57 Yes 62 -5.66 No 0 0 No -27 0.79 Yes 40 63.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75517845 - NM_001040108 MLH3 0 . . . 5.05 80.39 17 4.24 No NA NA NA 0 0 No -29 0.35 No 46 27.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94156724 - NM_005591 MRE11 0 . . . 10.95 88.6 40 4.51 No NA NA NA 0 0 No -32 0.7 Yes 47 53.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45801399 - NM_001048171 MUTYH 0 . . . 3.37 68.95 36 6.91 Yes 16 0.88 Yes 0 0 No -31 0.5 No 42 93.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190671698 + NM_000534 PMS1 0 . . . 9.63 85.17 25 5.86 Yes 10 0.47 No 0 0 No -24 0.95 Yes 41 85.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68605903 + NM_133509 RAD51B 0 . . . 3.49 83.21 21 5.21 No 66 0.2 No 0 0 No -24 0.72 Yes 43 70.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68396361 + NM_133509 RAD51B 0 . . . 9.02 86.02 19 4.8 No 11 1.86 Yes 0 0 No -16 0.51 No 47 67.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59903954 - NM_032043 BRIP1 0 . . . 2.84 74.94 25 4.59 No 43 1.28 Yes 0 0 No -24 0.9 Yes 48 90.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68800207 + NM_004360 CDH1 0 . . . 0.53 73.65 18 5.5 No 8 0.41 No 0 0 No -21 0.68 Yes 45 67.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59902619 - NM_032043 BRIP1 0 . . . 3.89 84.17 28 6.99 Yes 64 0.85 Yes 0 0 No -30 0.47 No 44 21.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190664546 + NM_000534 PMS1 0 . . . 1.75 69.52 27 5.57 Yes 76 1.23 Yes 0 0 No -27 0.69 Yes 43 32.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84404995 - NM_139076 FAM175A 0 . . . 0.4 67.06 15 5.34 No 39 -3.98 No 0 0 No -25 0.45 No 52 39.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29103028 - NM_001005735 CHEK2 0 . . . 3.2 0 24 4.76 No 45 1.21 Yes 0 0 No -24 0.64 No 13 63.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215668585 - NM_000465 BARD1 0 . . . 3.03 85.98 19 5.47 No 23 1.28 Yes 0 0 No -18 0.44 No 35 71.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94205213 - NM_005591 MRE11 0 . . . 3.32 70.94 16 5.46 No 10 0.74 No 0 0 No -23 0.77 Yes 35 65.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59826490 - NM_032043 BRIP1 0 . . . 3.17 0 44 5.07 No 68 -1.49 No 0 0 No -25 0.86 Yes 47 82.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29127581 - NM_001005735 CHEK2 0 . . . 0.93 77.69 25 5.28 No 34 0.5 No 0 0 No -9 0.42 No 45 72.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47720857 + NM_000251 MSH2 0 . . . 5.37 89.5 23 6.24 Yes 5 0.2 No 0 0 No -22 0.96 Yes 42 43.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108121287 + NM_000051 ATM 0 . . . 1.17 71.84 21 4.9 No 36 1.07 Yes 0 0 No -20 0.83 Yes 59 37.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75482252 - NM_001040108 MLH3 0 . . . 5.97 86.77 21 5.74 Yes 65 -4.94 No 0 0 No -20 0.86 Yes 53 67.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94226341 - NM_005591 MRE11 0 . . . 7.39 70.75 21 5.2 No 11 1.64 Yes 0 0 No -20 0.73 Yes 47 88.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90944404 - NM_002485 NBN 0 . . . 8.5 88.92 21 7.73 Yes 12 0.82 Yes 0 0 No -25 0.35 No 46 52.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68425988 + NM_133509 RAD51B 0 . . . 3.01 0 15 5.29 No 25 1.13 Yes 0 0 No -14 0.36 No 46 59.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68689788 + NM_133509 RAD51B 0 . . . 1.6 64.14 18 6.16 Yes 23 1.04 Yes 0 0 No -31 0.75 Yes 45 70.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68300377 + NM_133509 RAD51B 0 . . . 2.1 73.38 21 3.94 No 34 0.29 No 0 0 No -20 0.55 No 49 52.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1224605 + NM_000455 STK11 0 . . . 7.14 81.6 27 4.94 No 10 1.93 Yes 0 0 No -26 0.31 No 48 84.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69049655 + NM_133509 RAD51B 0 . . . 1.65 73.59 14 4.66 No -3 0.65 No 0 0 No -19 0.33 No 46 42.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90974374 - NM_002485 NBN 0 . . . 6.55 76.59 20 5.07 No 20 0.7 No 0 0 No -22 0.45 No 38 82.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59876218 - NM_032043 BRIP1 0 . . . 6.44 86.38 30 4.87 No 10 0.59 No 0 0 No -23 0.64 No 42 75.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89648604 + NM_000314 PTEN 0 . . . 5.4 68.66 12 4.53 No 18 0.57 No 0 0 No -49 0.71 Yes 39 48.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68445810 + NM_133509 RAD51B 0 . . . 1.79 67.04 33 5.91 Yes 43 1.02 Yes 0 0 No -28 0.86 Yes 50 44.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90969620 - NM_002485 NBN 0 . . . 3.19 58.15 30 5.45 No 48 1.35 Yes 0 0 No -24 0.6 No 47 46.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37070915 + NM_000249 MLH1 0 . . . 5.45 81.74 23 5.83 Yes 47 2.44 Yes 0 0 No -22 0.77 Yes 37 59.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68388537 + NM_133509 RAD51B 0 . . . 4.71 80.22 20 5.1 No NA NA NA 0 0 No -19 0.51 No 46 77.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68857795 + NM_004360 CDH1 0 . . . 2.21 0 20 5.1 No 70 -1.85 No 0 0 No -23 0.86 Yes 41 70.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75519286 - NM_001040108 MLH3 0 . . . 0.04 0 27 5.36 No 13 0.57 No 0 0 No -26 0.78 Yes 39 82.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68889796 + NM_133509 RAD51B 0 . . . 4.72 79.62 26 5.48 No 19 0.75 No 0 0 No -23 0.67 Yes 39 78.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68881150 + NM_133509 RAD51B 0 . . . 0.11 0 17 5.19 No 75 1.49 Yes 0 0 No -29 0.66 Yes 51 78.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105200591 + NM_021930 RINT1 0 . . . 6.18 76.47 16 5.83 Yes 42 0.47 No 0 0 No -21 0.48 No 16 80.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59915159 - NM_032043 BRIP1 0 . . . 4.37 0 26 5.1 No 9 0.87 Yes 0 0 No -57 0.44 No 27 76.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190649315 + NM_000534 PMS1 0 . . . 6.62 81.83 22 4.89 No 10 1.03 Yes 0 0 No -21 0.77 Yes 48 70.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68586983 + NM_133509 RAD51B 0 . . . 9.17 85.3 29 5 No 71 0.35 No 0 0 No -28 0.72 Yes 48 76.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68547179 + NM_133509 RAD51B 0 . . . 3.27 66.5 17 4.8 No 0 0.6 No 0 0 No -26 0.37 No 46 55.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41217522 - NM_007294 BRCA1 0 . . . 5.19 85.02 34 5.89 Yes 3 0.91 Yes 0 0 No -33 0.48 No 42 46.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68754564 + NM_133509 RAD51B 0 . . . 0.12 66.97 20 4.87 No 19 1.16 Yes 0 0 No -20 0.81 Yes 22 69.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59857896 - NM_032043 BRIP1 0 . . . 2.56 78.32 13 4.36 No 33 1.21 Yes 0 0 No -27 0.7 Yes 25 86.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68615775 + NM_133509 RAD51B 0 . . . 6.27 77.97 17 5.83 Yes 2 0.68 No 0 0 No -16 0.55 No 43 87.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94213975 - NM_005591 MRE11 0 . . . 3.72 73.84 56 6.97 Yes 32 -2.2 No 0 0 No -27 0.66 No 46 70.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23619241 - NM_024675 PALB2 0 . . . 0.8 68.23 17 4.8 No 60 0.99 Yes 0 0 No -37 0.83 Yes 47 83.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89678928 + NM_000314 PTEN 0 . . . 3.34 86.48 29 6.18 Yes 22 0.89 Yes 0 0 No -24 0.9 Yes 49 77.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94158506 - NM_005591 MRE11 0 . . . 1.88 0 28 5.29 No 48 0.47 No 0 0 No -32 0.26 No 29 66.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190702573 + NM_000534 PMS1 0 . . . 1.39 68.88 49 7.47 Yes 75 -5.37 No 0 0 No -19 0.48 No 38 52.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215596583 - NM_000465 BARD1 0 . . . 2.16 60.62 33 7.67 Yes 29 0.24 No 0 0 No -32 0.95 Yes 29 49.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68868282 + NM_004360 CDH1 0 . . . 1.74 0 29 5.21 No 6 0.45 No 0 0 No -28 0.91 Yes 52 77.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59820780 - NM_032043 BRIP1 0 . . . 5.48 75.97 16 4.88 No 34 0.92 Yes 0 0 No -23 0.69 Yes 45 49.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37036511 + NM_000249 MLH1 0 . . . 2.43 80.34 25 6.95 Yes 32 1.13 Yes 0 0 No -24 0.94 Yes 42 54.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108185352 + NM_000051 ATM 0 . . . 2.06 71.31 20 5.29 No 0 0.42 No 0 0 No -25 0.28 No 49 45.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68416696 + NM_133509 RAD51B 0 . . . 3.97 71.83 36 6.08 Yes 30 -2.78 No 0 0 No -35 0.54 No 49 79.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68715557 + NM_133509 RAD51B 0 . . . 2.52 71.64 24 4.82 No 16 0.45 No 0 0 No -23 0.74 Yes 42 78.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56800804 + NM_058216 RAD51C 0 . . . 3.34 88.99 17 4.69 No 14 0.75 No 0 0 No -20 0.74 Yes 44 91.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68669618 + NM_133509 RAD51B 0 . . . 4.97 79.29 28 6.99 Yes 69 0.72 No 0 0 No -27 0.94 Yes 50 65.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190668695 + NM_000534 PMS1 0 . . . 4.58 83.99 17 5.74 Yes 30 0.97 Yes 0 0 No -26 0.63 No 50 46.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40985898 + NM_001164269 RAD51 0 . . . 0.55 0 16 6.12 Yes 25 0.65 No 0 0 No -20 0.57 No 38 50.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90978352 - NM_002485 NBN 0 . . . 2.98 73.27 30 5.26 No 5 -2.8 No 0 0 No -30 0.78 Yes 41 86.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68580855 + NM_133509 RAD51B 0 . . . 5.94 70.51 17 6.61 Yes 63 0.38 No 0 0 No -26 0.44 No 27 69.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48030618 + NM_000179 MSH6 0 . . . 2.21 76.8 38 6.12 Yes 71 1.46 Yes 0 0 No -32 0.54 No 49 74.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23653300 - NM_024675 PALB2 0 . . . 5.14 75.44 14 3.8 No 57 -3.43 No 0 0 No -17 0.78 Yes 44 26.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68782090 + NM_133509 RAD51B 0 . . . 4.42 72.32 35 6.98 Yes 47 0.23 No 0 0 No -34 0.63 No 49 49.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41272755 - NM_007294 BRCA1 0 . . . 6.49 89.42 12 4.24 No 36 0.85 Yes 0 0 No -44 0.69 Yes 22 79.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47750739 + NM_000251 MSH2 0 . . . 5.06 82.97 31 5.51 No 48 -2.51 No 0 0 No -24 0.64 No 46 63.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68847477 + NM_004360 CDH1 0 . . . 5.79 77.1 16 5.5 No 26 1.2 Yes 0 0 No -29 0.54 No 32 75.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68985831 + NM_133509 RAD51B 0 . . . 3.26 85.39 12 5.07 No 73 0.63 No 0 0 No -19 0.29 No 43 91.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68592930 + NM_133509 RAD51B 0 . . . 4.93 87.09 27 5.43 No 32 1.04 Yes 0 0 No -26 0.47 No 45 55.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190704051 + NM_000534 PMS1 0 . . . 3.25 74.92 27 5.85 Yes 19 0.2 No 0 0 No -29 0.58 No 42 69.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59851340 - NM_032043 BRIP1 0 . . . 6.35 73.76 17 4.69 No 8 0.99 Yes 0 0 No -16 0.38 No 50 72.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69077362 + NM_133509 RAD51B 0 . . . 3.72 74.01 22 5.74 Yes 7 2.1 Yes 0 0 No -21 0.71 Yes 38 52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68764442 + NM_133509 RAD51B 0 . . . 0.66 66.7 21 4.96 No 67 -5.7 No 0 0 No -20 0.58 No 41 82.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59930077 - NM_032043 BRIP1 0 . . . 2.25 71.81 38 6.39 Yes 27 0.86 Yes 0 0 No -37 0.58 No 44 79.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68854220 + NM_004360 CDH1 0 . . . 5.44 71.4 23 4.17 No 47 1.69 Yes 0 0 No -23 0.38 No 46 84.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68917290 + NM_133509 RAD51B 0 . . . 6.9 79.76 13 5.29 No 15 1.42 Yes 0 0 No -21 0.76 Yes 43 73.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32934523 + NM_000059 BRCA2 0 . . . 1.93 0 25 5.29 No 5 1.64 Yes 0 0 No -29 0.72 Yes 43 76.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84387956 - NM_139076 FAM175A 0 . . . 0.09 74.68 42 5.04 No 4 0.41 No 0 0 No -26 0.39 No 54 83.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68782186 + NM_133509 RAD51B 0 . . . 0.18 59.02 20 6.16 Yes 7 -2.81 No 0 0 No -19 0.83 Yes 40 25.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190661440 + NM_000534 PMS1 0 . . . 8.99 83.66 15 4.58 No 18 0.64 No 0 0 No -22 0.47 No 46 53.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69121310 + NM_133509 RAD51B 0 . . . 5.87 72.74 43 7.22 Yes 62 1.46 Yes 0 0 No -42 0.84 Yes 51 25.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23635277 - NM_024675 PALB2 0 . . . 8.58 88.19 15 5.48 No 20 0.95 Yes 0 0 No -23 0.85 Yes 38 93.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89651175 + NM_000314 PTEN 0 . . . 3.92 70.57 44 5.86 Yes -2 1.3 Yes 0 0 No -43 0.36 No 40 50.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59806741 - NM_032043 BRIP1 0 . . . 3.87 66.76 38 6.16 Yes 54 1.39 Yes 0 0 No -23 0.41 No 42 72.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68922408 + NM_133509 RAD51B 0 . . . 1.27 76.63 32 5.63 Yes 58 -3.89 No 0 0 No -16 0.55 No 43 39.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131971153 + NM_005732 RAD50 0 . . . 6.04 76.13 19 4.69 No 4 0.58 No 0 0 No -18 0.46 No 54 49.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68948507 + NM_133509 RAD51B 0 . . . 4.34 75.6 10 5.2 No 21 0.91 Yes 0 0 No -24 0.37 No 37 45.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68436321 + NM_133509 RAD51B 0 . . . 0.57 0 21 5.09 No 60 -5.35 No 0 0 No -20 0.71 Yes 44 78.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68722834 + NM_133509 RAD51B 0 . . . 5.28 72.78 16 5.06 No 76 -4.19 No 0 0 No -27 0.51 No 53 56.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215654061 - NM_000465 BARD1 0 . . . 4 82.27 26 4.88 No 65 1.12 Yes 0 0 No -25 0.54 No 46 66.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47735105 + NM_000251 MSH2 0 . . . 5.35 74.17 38 6.91 Yes 75 -4.97 No 0 0 No -37 0.56 No 45 69.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68783518 + NM_004360 CDH1 0 . . . 6.84 73.07 19 7.07 Yes 6 0.32 No 0 0 No -18 0.73 Yes 52 78.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84398117 - NM_139076 FAM175A 0 . . . 4.01 68.02 26 6.71 Yes 16 0.27 No 0 0 No -25 0.73 Yes 35 57.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215634462 - NM_000465 BARD1 0 . . . 3.61 83 21 4.61 No 56 0.91 Yes 0 0 No -40 0.53 No 32 45.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68469781 + NM_133509 RAD51B 0 . . . 6.21 77.6 25 6.85 Yes -1 0.37 No 0 0 No -24 0.9 Yes 45 68.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108202112 + NM_000051 ATM 0 . . . 4.65 74.01 16 5 No 2 0.98 Yes 0 0 No -45 0.55 No 50 80.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68516058 + NM_133509 RAD51B 0 . . . 5.3 66.46 35 6.4 Yes 62 -5.4 No 0 0 No -34 0.59 No 38 86.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69122964 + NM_133509 RAD51B 0 . . . 7.3 71.63 17 3.9 No 27 1.06 Yes 0 0 No -41 0.38 No 45 61.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23641975 - NM_024675 PALB2 0 . . . 2.91 71.9 24 4.81 No 14 1.32 Yes 0 0 No -23 0.83 Yes 44 94.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89635563 + NM_000314 PTEN 0 . . . 3.44 74.15 29 6.13 Yes 34 1.15 Yes 0 0 No -23 0.5 No 46 23.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89662431 + NM_000314 PTEN 0 . . . 2.06 76.3 31 5.91 Yes 67 1.6 Yes 0 0 No -22 0.53 No 43 42.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215597154 - NM_000465 BARD1 0 . . . 2.32 63.65 32 5.66 Yes 70 -4.65 No 0 0 No -25 0.75 Yes 31 47.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94190479 - NM_005591 MRE11 0 . . . 5.84 85.45 24 4.47 No 32 2.51 Yes 0 0 No -38 0.54 No 30 77.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105192642 + NM_021930 RINT1 0 . . . 5.18 76.84 29 7.09 Yes 26 1.41 Yes 0 0 No -28 0.91 Yes 32 66.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21971524 - NM_000077 CDKN2A 0 . . . 0.09 0 27 5.22 No 59 -4.1 No 0 0 No -26 0.57 No 54 76.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6049578 - NM_000535 PMS2 0 . . . 2.79 84.41 30 8.61 Yes 66 -1.62 No 0 0 No -32 0.72 Yes 34 41.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69031505 + NM_133509 RAD51B 0 . . . 0.14 75.65 31 5.82 Yes 69 -5.4 No 0 0 No -30 0.92 Yes 46 41.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190671990 + NM_000534 PMS1 0 . . . 7.32 83.47 37 4.95 No -2 0.69 No 0 0 No -30 0.96 Yes 38 71.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68495729 + NM_133509 RAD51B 0 . . . 0.71 0 29 6.24 Yes 63 1.61 Yes 0 0 No -28 0.83 Yes 28 47.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69022445 + NM_133509 RAD51B 0 . . . 0.71 0 31 6.23 Yes 38 1.1 Yes 0 0 No -30 0.81 Yes 20 71.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68782551 + NM_133509 RAD51B 0 . . . 3.55 65.22 23 3.3 No 70 1.69 Yes 0 0 No -22 0.51 No 49 49.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68491448 + NM_133509 RAD51B 0 . . . 0.27 0 27 5.1 No 51 1.07 Yes 0 0 No -26 0.65 No 39 44.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7581034 - NM_000546 TP53 0 . . . 8.58 78.28 41 7.82 Yes 4 0.16 No 0 0 No -40 0.66 No 51 44.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48028443 + NM_000179 MSH6 0 . . . 0.24 0 15 5.19 No 4 0.3 No 0 0 No -29 0.65 No 28 74.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59846464 - NM_032043 BRIP1 0 . . . 5.59 0 16 4.69 No 1 0.8 Yes 0 0 No -15 0.25 No 47 56.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68704322 + NM_133509 RAD51B 0 . . . 5.82 78.87 21 5.43 No 22 1.28 Yes 0 0 No -20 0.8 Yes 36 72.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47653903 + NM_000251 MSH2 0 . . . 1.65 71.5 24 5.1 No 1 0 No 0 0 No -39 0.48 No 42 72.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69063651 + NM_133509 RAD51B 0 . . . 4.55 79.55 15 5.74 Yes 5 1.31 Yes 0 0 No -46 0.42 No 45 80.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69004486 + NM_133509 RAD51B 0 . . . 6.4 78.04 30 5.39 No 53 0.51 No 0 0 No -32 0.46 No 48 68.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799385 + NM_058216 RAD51C 0 . . . 3.53 81.58 15 4.7 No 64 0.97 Yes 0 0 No -24 0.78 Yes 36 64.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56811198 + NM_058216 RAD51C 0 . . . 1.08 84.22 50 6.93 Yes 33 1.14 Yes 0 0 No -38 0.52 No 25 40.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152351411 - NM_005431 XRCC2 0 . . . 7.88 75.44 17 4.88 No 44 1.64 Yes 0 0 No -32 0.85 Yes 50 60.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68930467 + NM_133509 RAD51B 0 . . . 3.68 75.54 38 5.09 No 23 0.83 Yes 0 0 No -21 0.57 No 49 76.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89646214 + NM_000314 PTEN 0 . . . 2.01 78.03 25 5.57 Yes 13 -0.52 No 0 0 No -29 0.49 No 48 55.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190673098 + NM_000534 PMS1 0 . . . 3.06 84 41 6.4 Yes 2 0.98 Yes 0 0 No -40 0.87 Yes 23 51.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59897921 - NM_032043 BRIP1 0 . . . 2.98 76.21 22 4.89 No 0 0.23 No 0 0 No -21 0.89 Yes 45 53.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37038696 + NM_000249 MLH1 0 . . . 1.58 71.22 24 5.15 No -1 0.39 No 0 0 No -23 0.79 Yes 59 31.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41270149 - NM_007294 BRCA1 0 . . . 3.4 72.86 22 4.68 No 69 0.88 Yes 0 0 No -21 0.89 Yes 44 80.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59797573 - NM_032043 BRIP1 0 . . . 3.84 72.76 20 5.5 No 36 0.98 Yes 0 0 No -19 0.78 Yes 39 52.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68596562 + NM_133509 RAD51B 0 . . . 6.71 88.03 18 7 Yes 74 -4.06 No 0 0 No -17 0.46 No 42 88.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68408202 + NM_133509 RAD51B 0 . . . 2.07 56.31 16 4.69 No 29 -0.78 No 0 0 No -15 0.42 No 49 41.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37049586 + NM_000249 MLH1 0 . . . 3.21 69.37 27 5.66 Yes 8 0.29 No 0 0 No -25 0.82 Yes 50 57.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23630499 - NM_024675 PALB2 0 . . . 3.26 79.02 30 5.43 No 10 1.35 Yes 0 0 No -23 0.61 No 48 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48010545 + NM_000179 MSH6 0 . . . 0.71 69.22 33 6.04 Yes NA NA NA 0 0 No -22 0.72 Yes 47 43.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90977615 - NM_002485 NBN 0 . . . 3.78 74.88 14 5.83 Yes 35 0.59 No 0 0 No -37 0.42 No 40 73.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190720605 + NM_000534 PMS1 0 . . . 3.74 77 31 5.45 No -3 0.42 No 0 0 No -24 0.88 Yes 32 48.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89642811 + NM_000314 PTEN 0 . . . 5.95 77.62 22 6.28 Yes 51 -3.83 No 0 0 No -21 0.95 Yes 39 62.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89668348 + NM_000314 PTEN 0 . . . 2.08 66.11 19 4.69 No 56 0.44 No 0 0 No -18 0.74 Yes 53 47.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68591120 + NM_133509 RAD51B 0 . . . 4.5 81.51 13 5.57 Yes -4 0.98 Yes 0 0 No -24 0.43 No 40 75.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32931017 + NM_000059 BRCA2 0 . . . 3.04 71.62 51 7.73 Yes 66 0.82 Yes 0 0 No -50 0.59 No 34 57.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108161533 + NM_000051 ATM 0 . . . 1.7 70.95 10 5.2 No 20 0.01 No 0 0 No -28 0.45 No 43 77.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84390231 - NM_139076 FAM175A 0 . . . 2.5 71.3 54 7.29 Yes 41 -4.17 No 0 0 No -49 0.7 Yes 43 68.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68309339 + NM_133509 RAD51B 0 . . . 6.51 79.66 54 7.73 Yes 12 1.48 Yes 0 0 No -24 0.56 No 46 71.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215612966 - NM_000465 BARD1 0 . . . 8.01 79.75 28 5.25 No 32 -1.24 No 0 0 No -27 0.77 Yes 43 91.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37090678 + NM_000249 MLH1 0 . . . 6.01 71.22 26 5.2 No 17 0.49 No 0 0 No -25 0.91 Yes 41 91.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45802958 - NM_001048171 MUTYH 0 . . . 5.68 74.78 21 3.26 No 56 0.61 No 0 0 No -21 0.64 No 33 58.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68805582 + NM_133509 RAD51B 0 . . . 1.41 70.91 48 8.78 Yes 76 -1.73 No 0 0 No -53 0.43 No 41 85.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68840703 + NM_004360 CDH1 0 . . . 3.36 82.25 48 6.64 Yes 68 0.53 No 0 0 No -20 0.86 Yes 45 37.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84395092 - NM_139076 FAM175A 0 . . . 0.94 72.69 27 4.99 No 43 1.19 Yes 0 0 No -26 0.67 Yes 15 90.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68364553 + NM_133509 RAD51B 0 . . . 4.02 80.12 27 5.15 No 9 1.09 Yes 0 0 No -22 0.86 Yes 49 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59920286 - NM_032043 BRIP1 0 . . . 3.22 72.83 34 5.74 Yes 41 0.67 No 0 0 No -46 0.43 No 46 68.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41268424 - NM_007294 BRCA1 0 . . . 2.85 0 24 4.91 No 70 -4.56 No 0 0 No -23 0.76 Yes 34 86.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68758511 + NM_133509 RAD51B 0 . . . 4.04 67.46 34 7.61 Yes -4 0.54 No 0 0 No -33 0.74 Yes 47 96.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108103770 + NM_000051 ATM 0 . . . 3.1 85.02 30 5.57 Yes 3 1.02 Yes 0 0 No -29 0.82 Yes 55 63.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68865269 + NM_133509 RAD51B 0 . . . 7.07 89.36 18 5.74 Yes 15 1.33 Yes 0 0 No -24 0.54 No 46 63.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68816565 + NM_133509 RAD51B 0 . . . 1 78.27 23 4.33 No 4 0.41 No 0 0 No -26 0.5 No 46 66.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68970156 + NM_133509 RAD51B 0 . . . 1.51 74.42 33 6.08 Yes 22 0.07 No 0 0 No -32 0.45 No 36 43.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6043176 - NM_000535 PMS2 0 . . . 1.65 61.37 12 4.24 No 18 1.03 Yes 0 0 No -25 0.34 No 32 68.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84393532 - NM_139076 FAM175A 0 . . . 0.18 63.68 28 5.48 No 60 0.02 No 0 0 No -23 0.33 No 40 60.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89688849 + NM_000314 PTEN 0 . . . 1.48 72.4 28 6.12 Yes 53 0.91 Yes 0 0 No -32 0.69 Yes 59 41.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68922705 + NM_133509 RAD51B 0 . . . 0.99 63.97 17 5.29 No 20 0.94 Yes 0 0 No -21 0.52 No 38 74.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68943622 + NM_133509 RAD51B 0 . . . 6.42 77.9 47 6.44 Yes 0 0.93 Yes 0 0 No -19 0.62 No 40 64.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68822130 + NM_133509 RAD51B 0 . . . 0.5 70.23 48 6.93 Yes 43 1.16 Yes 0 0 No -26 0.62 No 31 63.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94157944 - NM_005591 MRE11 0 . . . 1.4 73.71 16 6.1 Yes 46 1.29 Yes 0 0 No -20 0.62 No 39 90.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59896897 - NM_032043 BRIP1 0 . . . 4.04 64.77 21 5.04 No 50 1.55 Yes 0 0 No -20 0.48 No 39 61.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1212004 + NM_000455 STK11 0 . . . 9.55 80.63 25 5.39 No 57 -1.38 No 0 0 No -22 0.77 Yes 40 76.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1211154 + NM_000455 STK11 0 . . . 3.08 63.8 27 5.4 No 16 -2.18 No 0 0 No -26 0.8 Yes 42 40.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68823775 + NM_133509 RAD51B 0 . . . 1.6 0 22 4.58 No 35 0.63 No 0 0 No -21 0.6 No 51 92.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47750982 + NM_000251 MSH2 0 . . . 4.7 74.82 22 5.29 No 6 0.26 No 0 0 No -22 0.58 No 35 43.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47737176 + NM_000251 MSH2 0 . . . 13.31 83.58 28 6.21 Yes 72 0.87 Yes 0 0 No -21 0.7 Yes 41 35.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108191642 + NM_000051 ATM 0 . . . 0.55 72.25 63 6.56 Yes 35 1.03 Yes 0 0 No -27 0.48 No 47 42.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131920858 + NM_005732 RAD50 0 . . . 7.42 89.24 12 3.93 No 45 0.11 No 0 0 No -23 0.52 No 52 47.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131902999 + NM_005732 RAD50 0 . . . 3.07 81.74 17 3.75 No 52 0.17 No 0 0 No -20 0.4 No 49 68.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190662108 + NM_000534 PMS1 0 . . . 7.64 82.4 25 6.32 Yes 76 -3.42 No 0 0 No -24 0.96 Yes 44 59.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59756083 - NM_032043 BRIP1 0 . . . 3.42 76.99 16 4.69 No -3 0.62 No 0 0 No -36 0.66 No 48 91.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23641854 - NM_024675 PALB2 0 . . . 6.67 85.52 41 7.52 Yes 34 0.46 No 0 0 No -27 0.8 Yes 43 50.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68792545 + NM_004360 CDH1 0 . . . 6.18 84.33 49 8.08 Yes 8 0.35 No 0 0 No -32 0.83 Yes 50 97.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48036046 + NM_000179 MSH6 0 . . . 2.87 85.17 29 6.64 Yes 68 -1.72 No 0 0 No -28 0.5 No 21 78.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68652487 + NM_133509 RAD51B 0 . . . 2.08 72.51 95 9.09 Yes 63 0.07 No 0 0 No -29 0.63 No 53 41.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68379232 + NM_133509 RAD51B 0 . . . 0.26 81.08 21 5 No 3 0.83 Yes 0 0 No -24 0.78 Yes 55 31.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94214175 - NM_005591 MRE11 0 . . . 1.84 75.11 35 5.91 Yes 4 1.26 Yes 0 0 No -34 0.62 No 35 49.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108130310 + NM_000051 ATM 0 . . . 3.49 63.03 22 5.08 No 13 1.04 Yes 0 0 No -21 0.62 No 45 82.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47757521 + NM_000251 MSH2 0 . . . 2.63 82.05 32 6 Yes 68 -2.76 No 0 0 No -31 0.86 Yes 54 52.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41197373 - NM_007294 BRCA1 0 . . . 9.29 97.25 64 9.03 Yes 23 1.54 Yes 0 0 No -29 0.52 No 46 94.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68398338 + NM_133509 RAD51B 0 . . . 0.78 84.22 24 4.83 No 33 0.98 Yes 0 0 No -23 0.51 No 25 37.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45795258 - NM_001048171 MUTYH 0 . . . 0.61 65.92 27 5.39 No -3 0.15 No 0 0 No -26 0.8 Yes 61 30.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41255240 - NM_007294 BRCA1 0 . . . 7.92 84.9 19 3.61 No 21 1.63 Yes 0 0 No -19 0.47 No 47 69.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68509903 + NM_133509 RAD51B 0 . . . 1.87 75.86 40 5.14 No 26 0.8 Yes 0 0 No -33 0.34 No 32 88.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68995526 + NM_133509 RAD51B 0 . . . 3.28 80.07 44 4.95 No 31 0.42 No 0 0 No -32 0.51 No 51 45.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68728195 + NM_133509 RAD51B 0 . . . 4.91 69.43 19 5.32 No 68 -4.79 No 0 0 No -24 0.4 No 43 65.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68532370 + NM_133509 RAD51B 0 . . . 4.53 81.79 39 6.35 Yes NA NA NA 0 0 No -32 0.6 No 49 62.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68973622 + NM_133509 RAD51B 0 . . . 2.4 69.78 42 7.38 Yes 44 -3.04 No 0 0 No -26 0.74 Yes 49 48.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108114786 + NM_000051 ATM 0 . . . 0.81 78.47 27 6.48 Yes 75 -6.04 No 0 0 No -26 0.89 Yes 49 78.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69022040 + NM_133509 RAD51B 0 . . . 1.18 75.58 14 5.37 No 53 0.82 Yes 0 0 No -23 0.68 Yes 49 54.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59850016 - NM_032043 BRIP1 0 . . . 3.45 85.02 17 4.8 No 3 1.16 Yes 0 0 No -38 0.69 Yes 41 48.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108147723 + NM_000051 ATM 0 . . . 3.48 81.65 26 5.2 No 33 0.65 No 0 0 No -25 0.9 Yes 36 46.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68447725 + NM_133509 RAD51B 0 . . . 1.99 60.28 22 4.75 No 67 -3.78 No 0 0 No -19 0.51 No 52 25.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104172958 - NM_001100119 XRCC3 0 . . . 5.26 80.2 15 4.58 No NA NA NA 0 0 No -7 0.21 No 40 63.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68837084 + NM_133509 RAD51B 0 . . . 2.06 68.87 9 3.87 No 20 1.21 Yes 0 0 No -53 0.5 No 48 60.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190685142 + NM_000534 PMS1 0 . . . 3.08 80.88 43 6.59 Yes 9 0.53 No 0 0 No -31 0.81 Yes 49 84.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68971108 + NM_133509 RAD51B 0 . . . 5.96 82.86 18 6.21 Yes 14 0.73 No 0 0 No -23 0.76 Yes 44 94.89 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47740038 + NM_000251 MSH2 0 . . . 0.77 0 24 5.07 No 17 1.14 Yes 0 0 No -30 0.62 No 27 66.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21973177 - NM_000077 CDKN2A 0 . . . 7.04 74.9 30 6.61 Yes 54 0.89 Yes 0 0 No -29 0.89 Yes 50 71.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59869115 - NM_032043 BRIP1 0 . . . 1.86 66.94 19 5.48 No 6 1.29 Yes 0 0 No -38 0.36 No 41 75.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108161336 + NM_000051 ATM 0 . . . 1.5 76.32 59 5.99 Yes 42 -3.02 No 0 0 No -24 0.61 No 46 50.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40986481 + NM_001164269 RAD51 0 . . . 6.73 79.28 28 5.56 Yes 59 1.23 Yes 0 0 No -37 0.36 No 49 37.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29106539 - NM_001005735 CHEK2 0 . . . 3.6 72.96 34 7.74 Yes 63 1.2 Yes 0 0 No -33 0.75 Yes 42 68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59844610 - NM_032043 BRIP1 0 . . . 3.68 66.45 19 5.46 No 13 0.78 Yes 0 0 No -18 0.71 Yes 45 73.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84395233 - NM_139076 FAM175A 0 . . . 2.04 0 38 5.14 No 38 1.46 Yes 0 0 No -24 0.67 Yes 53 74.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68803411 + NM_133509 RAD51B 0 . . . 3.2 73.82 25 3.93 No 26 0.19 No 0 0 No -24 0.5 No 42 40.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68885892 + NM_133509 RAD51B 0 . . . 9.56 92.13 54 6.41 Yes 39 0.77 Yes 0 0 No -40 0.9 Yes 47 82.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89636628 + NM_000314 PTEN 0 . . . 0.36 0 23 4.95 No 47 1.24 Yes 0 0 No -22 0.51 No 47 93.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59809996 - NM_032043 BRIP1 0 . . . 4.6 74.01 29 6.03 Yes 36 0.55 No 0 0 No -21 0.69 Yes 45 67.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68687236 + NM_133509 RAD51B 0 . . . 2.99 78.75 26 5.66 Yes 71 -4.48 No 0 0 No -25 0.84 Yes 49 34.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32960022 + NM_000059 BRCA2 0 . . . 3.18 70.39 33 5.93 Yes 18 0.74 No 0 0 No -33 0.65 No 45 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1214852 + NM_000455 STK11 0 . . . 5.3 74.13 19 5.86 Yes 59 0.03 No 0 0 No -28 0.51 No 40 51.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131896445 + NM_005732 RAD50 0 . . . 4.28 76.87 22 6.24 Yes 48 1.23 Yes 0 0 No -21 0.97 Yes 43 90.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59812561 - NM_032043 BRIP1 0 . . . 4.49 77.37 19 3.85 No 55 0.45 No 0 0 No -25 0.33 No 48 44.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94196989 - NM_005591 MRE11 0 . . . 5.8 75.36 16 5.48 No 6 1.55 Yes 0 0 No -27 0.57 No 44 68.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94166491 - NM_005591 MRE11 0 . . . 1.31 76.2 32 4.56 No 71 -6.11 No 0 0 No -31 0.74 Yes 41 70.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68471792 + NM_133509 RAD51B 0 . . . 2.3 84.41 19 4.13 No 55 0.62 No 0 0 No -23 0.65 No 24 74.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41249231 - NM_007294 BRCA1 0 . . . 3.86 78.5 48 6.14 Yes 58 1.1 Yes 0 0 No -16 0.64 No 47 79.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47638087 + NM_000251 MSH2 0 . . . 3.6 85.02 28 6.57 Yes 4 1.05 Yes 0 0 No -27 0.72 Yes 54 68.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69109843 + NM_133509 RAD51B 0 . . . 0.99 69.49 30 6.71 Yes 21 0.6 No 0 0 No -29 0.91 Yes 47 43.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190692858 + NM_000534 PMS1 0 . . . 2.34 72.33 23 5.39 No 31 1.28 Yes 0 0 No -22 0.92 Yes 27 87.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75516023 - NM_001040108 MLH3 0 . . . 0.04 68.68 16 4.87 No 56 -5.11 No 0 0 No -26 0.55 No 38 79.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89667497 + NM_000314 PTEN 0 . . . 5.96 73.62 31 5.94 Yes 12 1.6 Yes 0 0 No -18 0.66 Yes 46 44.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68951541 + NM_133509 RAD51B 0 . . . 7.43 80.7 21 4.67 No 29 -0.56 No 0 0 No -24 0.89 Yes 29 74.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75505192 - NM_001040108 MLH3 0 . . . 1.19 62.79 17 4.27 No 68 1.19 Yes 0 0 No -16 0.59 No 40 33.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131934705 + NM_005732 RAD50 0 . . . 3.9 75.75 34 6 Yes 33 2.14 Yes 0 0 No -33 0.5 No 44 73.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131940194 + NM_005732 RAD50 0 . . . 5.92 82.31 12 5.74 Yes 59 1.08 Yes 0 0 No -45 0.58 No 49 82.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68812933 + NM_004360 CDH1 0 . . . 0.55 0 18 4.83 No 64 0.25 No 0 0 No -17 0.38 No 42 45.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68432757 + NM_133509 RAD51B 0 . . . 7.96 86.88 13 4.31 No 12 0.45 No 0 0 No -24 0.33 No 42 79.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59842135 - NM_032043 BRIP1 0 . . . 2.25 68.26 25 5.04 No 43 2.25 Yes 0 0 No -24 0.92 Yes 15 24.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1210482 + NM_000455 STK11 0 . . . 10.94 85.73 12 4.24 No 15 0.83 Yes 0 0 No -23 0.93 Yes 43 82.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47805654 + NM_000251 MSH2 0 . . . 3.91 74.82 23 6.15 Yes 69 1.08 Yes 0 0 No -23 0.79 Yes 43 83.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47779417 + NM_000251 MSH2 0 . . . 10.34 92.1 16 5.04 No 60 -2.14 No 0 0 No -24 0.47 No 45 72.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68910426 + NM_133509 RAD51B 0 . . . 1.85 72.2 33 6.78 Yes 0 0.46 No 0 0 No -24 0.54 No 58 30.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68493270 + NM_133509 RAD51B 0 . . . 3.49 69.46 35 6.06 Yes 61 1.04 Yes 0 0 No -30 0.59 No 46 86.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108126334 + NM_000051 ATM 0 . . . 3.14 79.63 22 5.02 No 4 1.46 Yes 0 0 No -26 0.61 No 43 80.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68531172 + NM_133509 RAD51B 0 . . . 5.67 73.91 36 6.07 Yes -1 0.01 No 0 0 No -30 0.68 Yes 50 90.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190699666 + NM_000534 PMS1 0 . . . 3.11 82.03 27 5.57 Yes 2 1.43 Yes 0 0 No -24 0.62 No 17 53.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68747358 + NM_133509 RAD51B 0 . . . 9.37 79.69 27 5.18 No 25 0.85 Yes 0 0 No -25 0.45 No 33 75.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68848040 + NM_133509 RAD51B 0 . . . 2.37 0 16 4.23 No 32 0.17 No 0 0 No -19 0.4 No 51 95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29094970 - NM_001005735 CHEK2 0 . . . 6.28 75.59 36 5.72 Yes 41 1.16 Yes 0 0 No -25 0.63 No 45 64.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68805316 + NM_133509 RAD51B 0 . . . 5.15 72.94 31 4.33 No 58 0.39 No 0 0 No -26 0.47 No 50 41.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68872768 + NM_133509 RAD51B 0 . . . 0.58 58.73 21 6.13 Yes 7 0.33 No 0 0 No -20 0.78 Yes 43 38.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68472175 + NM_133509 RAD51B 0 . . . 6.31 85.29 17 6.23 Yes 55 -3.2 No 0 0 No -36 0.61 No 46 91.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68650997 + NM_133509 RAD51B 0 . . . 6.72 87.25 48 6.99 Yes 2 1.32 Yes 0 0 No -29 0.67 Yes 44 65.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68822339 + NM_004360 CDH1 0 . . . 2.13 61.8 26 5.52 No 76 -3.9 No 0 0 No -25 0.85 Yes 46 31.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47661905 + NM_000251 MSH2 0 . . . 6.16 84.5 61 5.75 Yes 8 0.66 No 0 0 No -20 0.61 No 46 44.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68413108 + NM_133509 RAD51B 0 . . . 3.24 84.41 36 6.43 Yes 39 0.6 No 0 0 No -26 0.57 No 19 58.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6009383 - NM_000535 PMS2 0 . . . 6.62 82.62 42 6.33 Yes NA NA NA 0 0 No -24 0.89 Yes 52 47.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108211309 + NM_000051 ATM 0 . . . 7.07 83.2 13 5.1 No 26 0.64 No 0 0 No -21 0.46 No 37 73.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29096669 - NM_001005735 CHEK2 0 . . . 5.04 72.52 21 4.14 No 37 0.3 No 0 0 No -28 0.54 No 46 72.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69068114 + NM_133509 RAD51B 0 . . . 4.74 68.55 34 7.13 Yes 56 1.69 Yes 0 0 No -33 0.74 Yes 45 88.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108212907 + NM_000051 ATM 0 . . . 0.14 0 22 6.85 Yes 25 -3.26 No 0 0 No -21 0.97 Yes 23 53.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68854348 + NM_004360 CDH1 0 . . . 5.97 88.7 50 6.53 Yes 9 1.13 Yes 0 0 No -20 0.5 No 49 94.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59915061 - NM_032043 BRIP1 0 . . . 4.7 78.69 31 6.58 Yes 42 0.34 No 0 0 No -25 0.8 Yes 45 59.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131970535 + NM_005732 RAD50 0 . . . 3.98 67.98 38 6.48 Yes 5 0.61 No 0 0 No -38 0.35 No 31 60.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90949623 - NM_002485 NBN 0 . . . 1.07 67.9 24 5.48 No -3 1.36 Yes 0 0 No -23 0.94 Yes 49 93.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29081771 - NM_001005735 CHEK2 0 . . . 1.23 67.75 46 4.46 No 40 1.44 Yes 0 0 No -28 0.95 Yes 18 81.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68589934 + NM_133509 RAD51B 0 . . . 3.37 0 31 6.55 Yes 43 1.96 Yes 0 0 No -30 0.71 Yes 15 77.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41239516 - NM_007294 BRCA1 0 . . . 3.03 82.77 39 5.43 No 3 1.62 Yes 0 0 No -32 0.47 No 55 71.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68873935 + NM_133509 RAD51B 0 . . . 0.81 64.93 25 6.07 Yes 66 -5.38 No 0 0 No -24 0.86 Yes 49 34.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68811679 + NM_004360 CDH1 0 . . . 2.93 84.79 30 5.92 Yes 2 1.51 Yes 0 0 No -26 0.27 No 17 51.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68759511 + NM_133509 RAD51B 0 . . . 5.46 77.68 26 7.79 Yes 58 -4.11 No 0 0 No -25 0.58 No 49 76.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7588385 - NM_000546 TP53 0 . . . 6.64 77.97 24 5.48 No 34 -3.44 No 0 0 No -23 0.77 Yes 48 60.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59860966 - NM_032043 BRIP1 0 . . . 2.48 65.72 21 5.65 Yes 1 0.22 No 0 0 No -25 0.72 Yes 49 65.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131973542 + NM_005732 RAD50 0 . . . 0.45 76.2 25 6 Yes 66 0.76 No 0 0 No -24 0.62 No 34 41.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108091845 + NM_000051 ATM 0 . . . 5.98 81.04 22 5.27 No 18 0.55 No 0 0 No -29 0.71 Yes 53 51.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59904350 - NM_032043 BRIP1 0 . . . 5.75 68.8 16 5.48 No 15 0.84 Yes 0 0 No -27 0.29 No 43 89.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94224822 - NM_005591 MRE11 0 . . . 4.2 75.61 25 5.39 No 62 0.83 Yes 0 0 No -22 0.68 Yes 42 41.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41204935 - NM_007294 BRCA1 0 . . . 0.9 0 20 5.1 No 63 -4.2 No 0 0 No -17 0.31 No 50 56.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215661676 - NM_000465 BARD1 0 . . . 4.06 70.15 33 5.78 Yes 34 0.74 No 0 0 No -23 0.79 Yes 39 58.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69085235 + NM_133509 RAD51B 0 . . . 2.61 61.56 19 5.12 No 50 1.83 Yes 0 0 No -31 0.64 No 48 53.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47760360 + NM_000251 MSH2 0 . . . 1.1 74.73 20 5.57 Yes 33 1.16 Yes 0 0 No -19 0.59 No 16 52.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68852784 + NM_133509 RAD51B 0 . . . 7.6 77.27 49 7.52 Yes 26 1.2 Yes 0 0 No -16 0.64 No 32 63.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69012443 + NM_133509 RAD51B 0 . . . 2.54 74.51 24 3.78 No 19 1.11 Yes 0 0 No -26 0.62 No 46 75.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68724693 + NM_133509 RAD51B 0 . . . 1.45 55.84 16 5.66 Yes 11 1.51 Yes 0 0 No -29 0.63 No 47 82.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131919652 + NM_005732 RAD50 0 . . . 2.41 68.34 13 4.62 No 13 0.43 No 0 0 No -22 0.44 No 40 61.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29088418 - NM_001005735 CHEK2 0 . . . 1.54 69.5 27 5.2 No 70 -3.42 No 0 0 No -26 0.54 No 33 41.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68914161 + NM_133509 RAD51B 0 . . . 8.63 80.18 21 4.89 No 13 0.66 No 0 0 No -20 0.69 Yes 45 89.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59801480 - NM_032043 BRIP1 0 . . . 0.77 0 22 3.59 No 72 1.23 Yes 0 0 No -21 0.9 Yes 24 64.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68368234 + NM_133509 RAD51B 0 . . . 0.49 66.7 33 6.77 Yes 19 1.32 Yes 0 0 No -32 0.75 Yes 39 78.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47698973 + NM_000251 MSH2 0 . . . 3.13 60.77 25 5.48 No 30 -3.33 No 0 0 No -20 0.62 No 40 28.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6015703 - NM_000535 PMS2 0 . . . 4.83 79.69 16 4.69 No 7 1.16 Yes 0 0 No -22 0.56 No 51 74.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48031294 + NM_000179 MSH6 0 . . . 4.86 79.62 18 4.35 No 22 0.76 No 0 0 No -58 0.57 No 38 74.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68633626 + NM_133509 RAD51B 0 . . . 5.94 72.37 15 4.47 No 12 1.99 Yes 0 0 No -22 0.28 No 46 73.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215658864 - NM_000465 BARD1 0 . . . 3.07 72.43 65 5.45 No 32 0.93 Yes 0 0 No -30 0.91 Yes 47 75.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47654099 + NM_000251 MSH2 0 . . . 0.71 72 17 4.39 No 37 0.32 No 0 0 No -19 0.73 Yes 17 52.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68573862 + NM_133509 RAD51B 0 . . . 1.67 69.05 22 5.28 No 40 0.12 No 0 0 No -21 0.63 No 48 41.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68852625 + NM_133509 RAD51B 0 . . . 8.9 89 15 4.87 No -4 0.38 No 0 0 No -23 0.88 Yes 45 61.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37088056 + NM_000249 MLH1 0 . . . 0.72 0 19 4.95 No 76 1.29 Yes 0 0 No -18 0.68 Yes 33 78.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68528157 + NM_133509 RAD51B 0 . . . 0.02 53 32 7.02 Yes 10 1.02 Yes 0 0 No -31 0.58 No 48 77.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89733512 + NM_000314 PTEN 0 . . . 7.59 82.33 20 5.82 Yes 7 1.06 Yes 0 0 No -24 0.74 Yes 30 46.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131897560 + NM_005732 RAD50 0 . . . 4.04 66.77 21 5.19 No 12 1.19 Yes 0 0 No -21 0.45 No 46 84.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47751440 + NM_000251 MSH2 0 . . . 4.5 61.64 41 6.51 Yes 64 -4.7 No 0 0 No -24 0.66 No 44 74.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68842471 + NM_133509 RAD51B 0 . . . 4.64 79.59 16 4.24 No 65 1.05 Yes 0 0 No -51 0.81 Yes 46 63.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68787739 + NM_004360 CDH1 0 . . . 2.59 80.2 36 6 Yes 68 -4.51 No 0 0 No -35 0.55 No 50 85.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59758797 - NM_032043 BRIP1 0 . . . 3.72 81.35 16 4.86 No 14 -2.02 No 0 0 No -20 0.46 No 40 67.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105208990 + NM_021930 RINT1 0 . . . 3.6 80.66 13 5.36 No 58 0.75 No 0 0 No -26 0.51 No 51 73.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94197506 - NM_005591 MRE11 0 . . . 1.05 63.66 26 6.41 Yes 60 -5.63 No 0 0 No -25 0.83 Yes 44 62.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68773445 + NM_004360 CDH1 0 . . . 0.69 80.49 28 5.39 No 32 0.45 No 0 0 No -27 0.72 Yes 26 60.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68828894 + NM_133509 RAD51B 0 . . . 1.5 68.52 18 4.85 No 17 -2.17 No 0 0 No -38 0.66 No 53 28.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68685755 + NM_133509 RAD51B 0 . . . 5.01 81.95 26 6.68 Yes 13 1.11 Yes 0 0 No -25 0.87 Yes 45 87.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105176650 + NM_021930 RINT1 0 . . . 3.97 86.65 40 6.36 Yes 14 0.25 No 0 0 No -27 0.62 No 44 68.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48022794 + NM_000179 MSH6 0 . . . 5.9 87 31 5.74 Yes 12 1.33 Yes 0 0 No -30 0.72 Yes 46 95.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23627900 - NM_024675 PALB2 0 . . . 1.36 74.99 24 5.91 Yes 64 0.57 No 0 0 No -23 0.92 Yes 61 29.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75515759 - NM_001040108 MLH3 0 . . . 7.21 80.45 29 5.15 No 48 1.74 Yes 0 0 No -28 0.88 Yes 44 51.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89675048 + NM_000314 PTEN 0 . . . 3.26 72.41 23 5.35 No 4 0.04 No 0 0 No -22 0.61 No 48 49.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59768699 - NM_032043 BRIP1 0 . . . 0.66 0 38 8.83 Yes 64 0.59 No 0 0 No -40 0.56 No 41 80.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29102144 - NM_001005735 CHEK2 0 . . . 1.77 71.09 27 5.48 No 34 -2.11 No 0 0 No -26 0.89 Yes 48 59.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47735641 + NM_000251 MSH2 0 . . . 1.1 70.88 17 4.8 No 57 1.69 Yes 0 0 No -20 0.85 Yes 48 60.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94226172 - NM_005591 MRE11 0 . . . 1.41 75.79 24 5.48 No -2 0.07 No 0 0 No -26 0.58 No 47 29.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108234523 + NM_000051 ATM 0 . . . 0.32 65.2 30 5.55 No 40 1.1 Yes 0 0 No -29 0.87 Yes 36 90.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94213894 - NM_005591 MRE11 0 . . . 1.91 65.2 26 5.66 Yes 2 1.13 Yes 0 0 No -25 0.9 Yes 44 56.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59828395 - NM_032043 BRIP1 0 . . . 1.43 71.27 31 3.59 No 7 1.15 Yes 0 0 No -30 0.87 Yes 41 48.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47687640 + NM_000251 MSH2 0 . . . 2.21 62.9 21 4.95 No 17 0.32 No 0 0 No -21 0.52 No 43 86.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6017606 - NM_000535 PMS2 0 . . . 2.31 68.06 33 5.9 Yes 52 0.9 Yes 0 0 No -32 0.85 Yes 48 80.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29131706 - NM_001005735 CHEK2 0 . . . 4.93 85.02 56 7.06 Yes 4 1.2 Yes 0 0 No -24 0.93 Yes 54 54.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41006182 + NM_001164269 RAD51 0 . . . 6.71 85.68 30 5.58 Yes 10 1.31 Yes 0 0 No -29 0.51 No 48 89.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68929690 + NM_133509 RAD51B 0 . . . 6.69 78.72 18 4.69 No 58 1.12 Yes 0 0 No -21 0.68 Yes 49 49.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89704952 + NM_000314 PTEN 0 . . . 4.98 81.05 22 5.91 Yes 22 0.24 No 0 0 No -21 0.68 Yes 36 61.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131971242 + NM_005732 RAD50 0 . . . 2.36 75.76 18 7 Yes 22 1.16 Yes 0 0 No -17 0.44 No 36 83.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90947529 - NM_002485 NBN 0 . . . 0.08 62.57 20 4.55 No 50 0.29 No 0 0 No -23 0.56 No 42 58.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59940329 - NM_032043 BRIP1 0 . . . 1.94 67.58 35 5.79 Yes 34 0.93 Yes 0 0 No -27 0.63 No 24 49.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94217394 - NM_005591 MRE11 0 . . . 3.88 77.83 14 5.39 No 56 0.43 No 0 0 No -28 0.18 No 41 83.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131899707 + NM_005732 RAD50 0 . . . 5.55 86.44 46 6.23 Yes 45 0.96 Yes 0 0 No -27 0.5 No 55 70.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75511866 - NM_001040108 MLH3 0 . . . 8.07 86.24 25 5.29 No 7 1.22 Yes 0 0 No -24 0.77 Yes 51 87.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68451311 + NM_133509 RAD51B 0 . . . 6.91 80.98 29 5.55 No 38 0.99 Yes 0 0 No -28 0.82 Yes 28 60.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68954064 + NM_133509 RAD51B 0 . . . 1.16 71.88 20 4.85 No 26 0.96 Yes 0 0 No -25 0.39 No 43 49.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68804409 + NM_004360 CDH1 0 . . . 0.72 75.49 27 4.34 No 60 1.42 Yes 0 0 No -21 0.35 No 47 95.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94172973 - NM_005591 MRE11 0 . . . 5.8 84.45 18 6.55 Yes 21 1.79 Yes 0 0 No -32 0.45 No 44 64.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68378992 + NM_133509 RAD51B 0 . . . 3.71 69.21 21 4.77 No 47 0.77 No 0 0 No -20 0.75 Yes 43 61.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215654806 - NM_000465 BARD1 0 . . . 0.74 82.33 28 5.2 No 13 0.55 No 0 0 No -27 0.8 Yes 45 85.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89654693 + NM_000314 PTEN 0 . . . 5.87 86.81 21 4.43 No 7 0.71 No 0 0 No -27 0.61 No 50 63.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84386285 - NM_139076 FAM175A 0 . . . 1.65 81.8 15 4.58 No 4 1.15 Yes 0 0 No -21 0.58 No 43 54.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29129794 - NM_001005735 CHEK2 0 . . . 0.26 0 22 3.95 No 45 1.08 Yes 0 0 No -22 0.75 Yes 38 68.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131930732 + NM_005732 RAD50 0 . . . 2.66 64.45 27 5.2 No 62 0.69 No 0 0 No -26 0.56 No 40 47.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190702208 + NM_000534 PMS1 0 . . . 7.3 84.34 20 4.89 No 63 0.39 No 0 0 No -23 0.93 Yes 41 61.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59930422 - NM_032043 BRIP1 0 . . . 3.83 80.48 28 5.83 Yes 26 0.88 Yes 0 0 No -27 0.79 Yes 43 62.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32949607 + NM_000059 BRCA2 0 . . . 5.41 69.62 18 4.58 No 40 0.86 Yes 0 0 No -17 0.78 Yes 46 53.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68803988 + NM_133509 RAD51B 0 . . . 1.27 70.17 42 6.48 Yes -1 0.3 No 0 0 No -27 0.49 No 43 58.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68810011 + NM_133509 RAD51B 0 . . . 8.99 77.26 19 4.9 No 29 0.3 No 0 0 No -18 0.59 No 29 54.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32952611 + NM_000059 BRCA2 0 . . . 4.62 83.47 20 6.4 Yes 23 -2.63 No 0 0 No -19 0.81 Yes 39 49.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68336545 + NM_133509 RAD51B 0 . . . 2.34 79.87 26 6.07 Yes -4 -0.8 No 0 0 No -25 0.75 Yes 49 80.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37072413 + NM_000249 MLH1 0 . . . 2.1 70.9 18 5.47 No 10 0.33 No 0 0 No -23 0.4 No 48 65.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215595170 - NM_000465 BARD1 0 . . . 2.49 73.24 22 6.85 Yes 70 0.66 No 0 0 No -21 0.97 Yes 46 18.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68764133 + NM_133509 RAD51B 0 . . . 3.83 82.69 19 5.22 No 4 0.23 No 0 0 No -27 0.79 Yes 37 75.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68989812 + NM_133509 RAD51B 0 . . . 1.35 73.66 25 5.92 Yes 53 -1.71 No 0 0 No -28 0.52 No 30 62.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68877549 + NM_133509 RAD51B 0 . . . 8.4 86.41 24 6.36 Yes 71 -3.82 No 0 0 No -21 0.58 No 52 69.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41000126 + NM_001164269 RAD51 0 . . . 3.85 78.58 31 5.64 Yes 33 1.17 Yes 0 0 No -30 0.66 No 25 48.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190685303 + NM_000534 PMS1 0 . . . 0.23 62.41 20 5.11 No 34 0.31 No 0 0 No -40 0.75 Yes 49 33.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33442743 - NM_002878 RAD51D 0 . . . 3.16 70.46 23 5.18 No 39 1.88 Yes 0 0 No -22 0.44 No 47 67.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921602 + NM_133509 RAD51B 0 . . . 0.53 69.77 13 5.29 No 73 -4.13 No 0 0 No -21 0.45 No 54 58.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48012015 + NM_000179 MSH6 0 . . . 2.98 0 12 5.2 No 65 -0.17 No 0 0 No -44 0.54 No 39 75.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68772193 + NM_133509 RAD51B 0 . . . 4.65 79.24 16 6.29 Yes 27 0.99 Yes 0 0 No -22 0.51 No 44 71.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108209599 + NM_000051 ATM 0 . . . 2.53 0 33 6.46 Yes 68 1.15 Yes 0 0 No -33 0.42 No 43 70.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89687614 + NM_000314 PTEN 0 . . . 0.07 0 19 4.58 No 30 0.62 No 0 0 No -18 0.62 No 43 81.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68808752 + NM_004360 CDH1 0 . . . 1.64 67.24 20 4.48 No 41 -1.62 No 0 0 No -20 0.42 No 47 33.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68477086 + NM_133509 RAD51B 0 . . . 1.79 64.92 14 5.2 No 66 0.21 No 0 0 No -22 0.44 No 46 56.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68764260 + NM_133509 RAD51B 0 . . . 0.09 0 24 5.14 No 73 -2.97 No 0 0 No -23 0.77 Yes 55 46.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32933927 + NM_000059 BRCA2 0 . . . 2.19 75.71 18 4.21 No 0 0.67 No 0 0 No -18 0.73 Yes 52 44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6026077 - NM_000535 PMS2 0 . . . 2.07 70.85 30 5.66 Yes 23 0.77 No 0 0 No -29 0.67 Yes 45 76.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68716771 + NM_133509 RAD51B 0 . . . 8.07 79.28 13 4.83 No 68 -3.98 No 0 0 No -29 0.87 Yes 53 71.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108098178 + NM_000051 ATM 0 . . . 5.33 76.42 27 5.39 No 30 -4.15 No 0 0 No -26 0.76 Yes 44 85.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56770393 + NM_058216 RAD51C 0 . . . 0.96 72.5 18 5.92 Yes 27 1.44 Yes 0 0 No -17 0.88 Yes 31 89.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105188276 + NM_021930 RINT1 0 . . . 1.55 66.46 9 3.87 No 16 1.15 Yes 0 0 No -46 0.5 No 42 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105191303 + NM_021930 RINT1 0 . . . 2.56 70.13 12 5 No 16 0.47 No 0 0 No -18 0.44 No 42 90.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75478936 - NM_001040108 MLH3 0 . . . 3.33 78.07 21 4.51 No 54 -1.49 No 0 0 No -20 0.91 Yes 21 92.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90973956 - NM_002485 NBN 0 . . . 1.54 0 27 5.46 No 60 1.18 Yes 0 0 No -26 0.78 Yes 49 32.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215589719 - NM_000465 BARD1 0 . . . 1.86 59.13 14 5.56 Yes 67 1.84 Yes 0 0 No -24 0.37 No 51 91.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33429122 - NM_002878 RAD51D 0 . . . 1.89 68.16 22 5.6 Yes 38 1 Yes 0 0 No -25 0.63 No 53 38.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75511345 - NM_001040108 MLH3 0 . . . 0.28 0 17 4.79 No 18 0.62 No 0 0 No -19 0.57 No 51 41.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40999936 + NM_001164269 RAD51 0 . . . 6.47 83.64 29 5.78 Yes 68 -2.61 No 0 0 No -31 0.64 No 25 56.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69077094 + NM_133509 RAD51B 0 . . . 5.35 82.67 42 6.63 Yes -3 0.93 Yes 0 0 No -41 0.67 Yes 32 71.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41218232 - NM_007294 BRCA1 0 . . . 4.58 85.4 17 3.9 No 18 -3.15 No 0 0 No -17 0.55 No 49 47.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6035170 - NM_000535 PMS2 0 . . . 2.08 74.46 18 5.65 Yes 70 -2.95 No 0 0 No -25 0.92 Yes 45 50.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68950525 + NM_133509 RAD51B 0 . . . 1.31 63.21 28 5.38 No 55 0.97 Yes 0 0 No -27 0.5 No 39 93.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68707134 + NM_133509 RAD51B 0 . . . 3.38 77.26 20 5.85 Yes 34 -1.67 No 0 0 No -26 0.47 No 50 41.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59931444 - NM_032043 BRIP1 0 . . . 7.59 86.32 15 5.91 Yes 26 0.94 Yes 0 0 No -28 0.74 Yes 38 67.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59939071 - NM_032043 BRIP1 0 . . . 0.34 0 30 6 Yes 32 -3.61 No 0 0 No -30 0.45 No 34 59.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68574743 + NM_133509 RAD51B 0 . . . 1.23 67.82 36 7.39 Yes 76 -5.91 No 0 0 No -35 0.86 Yes 46 75.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48019756 + NM_000179 MSH6 0 . . . 3.05 68.34 25 5.28 No 36 0.69 No 0 0 No -24 0.95 Yes 40 70.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190659024 + NM_000534 PMS1 0 . . . 2.44 77.7 16 5.72 Yes 8 1.21 Yes 0 0 No -24 0.62 No 50 89.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89697650 + NM_000314 PTEN 0 . . . 3.16 84.7 25 5.9 Yes 12 0.61 No 0 0 No -24 0.81 Yes 46 90.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108237203 + NM_000051 ATM 0 . . . 3.19 71.14 35 4.46 No 42 1.12 Yes 0 0 No -20 0.8 Yes 50 75.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68927299 + NM_133509 RAD51B 0 . . . 5.06 76.24 31 4.75 No 62 1.6 Yes 0 0 No -26 0.49 No 40 34.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68287834 + NM_133509 RAD51B 0 . . . 8.05 93.09 34 4.45 No 3 1.56 Yes 0 0 No -31 0.59 No 49 93.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47785921 + NM_000251 MSH2 0 . . . 1.54 61.26 23 3.64 No 1 0.08 No 0 0 No -23 0.81 Yes 57 23.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68834786 + NM_133509 RAD51B 0 . . . 3.25 72.47 13 4.65 No 75 0.67 No 0 0 No -18 0.44 No 35 50.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68418805 + NM_133509 RAD51B 0 . . . 8.26 82.1 23 4.9 No 37 1.05 Yes 0 0 No -22 0.85 Yes 48 88.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7583143 - NM_000546 TP53 0 . . . 4.88 68.3 28 4.24 No -3 0.67 No 0 0 No -27 0.91 Yes 16 31.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69091300 + NM_133509 RAD51B 0 . . . 5.41 76.84 21 4.34 No 40 2.14 Yes 0 0 No -24 0.88 Yes 37 81.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68852633 + NM_004360 CDH1 0 . . . 1.39 61.05 10 4.47 No 5 0.5 No 0 0 No -55 0.52 No 42 26.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68673210 + NM_133509 RAD51B 0 . . . 3.7 76.27 12 3.43 No 17 1.13 Yes 0 0 No -42 0.59 No 41 74.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21989104 - NM_000077 CDKN2A 0 . . . 0.35 60.24 36 6.66 Yes 62 0.89 Yes 0 0 No -30 0.74 Yes 21 57.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68617034 + NM_133509 RAD51B 0 . . . 9.37 85.95 29 5.04 No 60 0.99 Yes 0 0 No -21 0.56 No 49 75.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68670881 + NM_133509 RAD51B 0 . . . 3.54 73.22 31 5.91 Yes 16 1.54 Yes 0 0 No -30 0.8 Yes 42 72.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23615668 - NM_024675 PALB2 0 . . . 1.63 67.75 32 5.15 No 75 1.51 Yes 0 0 No -31 0.77 Yes 43 68.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89673455 + NM_000314 PTEN 0 . . . 4.53 77.87 17 5.57 Yes 32 0.96 Yes 0 0 No -16 0.75 Yes 21 86.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56791049 + NM_058216 RAD51C 0 . . . 6.25 71.97 14 4.19 No -4 1.12 Yes 0 0 No -22 0.65 No 43 72.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68808179 + NM_004360 CDH1 0 . . . 0.81 67.3 63 9.4 Yes 4 0.5 No 0 0 No -24 0.74 Yes 54 61.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94215129 - NM_005591 MRE11 0 . . . 3.59 75.62 14 4 No 4 0.56 No 0 0 No -39 0.57 No 29 60.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68860379 + NM_133509 RAD51B 0 . . . 2.06 71.53 25 5.29 No 27 0.92 Yes 0 0 No -24 0.91 Yes 41 66.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47746061 + NM_000251 MSH2 0 . . . 0.05 0 27 4.85 No 57 1.33 Yes 0 0 No -26 0.71 Yes 32 62.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69098124 + NM_133509 RAD51B 0 . . . 0.47 63.2 17 6.71 Yes 67 0.47 No 0 0 No -16 0.8 Yes 30 53.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1226662 + NM_000455 STK11 0 . . . 5.55 83.89 29 5.47 No 5 -0.9 No 0 0 No -28 0.96 Yes 49 55.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59834540 - NM_032043 BRIP1 0 . . . 1.04 55.01 16 5.66 Yes 66 0.56 No 0 0 No -23 0.43 No 39 25.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84403953 - NM_139076 FAM175A 0 . . . 2.54 0 46 7.58 Yes 45 0.68 No 0 0 No -28 0.84 Yes 53 86.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59911854 - NM_032043 BRIP1 0 . . . 4.86 82.07 21 5.5 No 43 -1.38 No 0 0 No -21 0.4 No 42 60.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68801420 + NM_133509 RAD51B 0 . . . 2.58 61.73 15 4.55 No 15 0.58 No 0 0 No -47 0.42 No 43 70.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59787680 - NM_032043 BRIP1 0 . . . 3.44 65.34 10 4 No 74 0.83 Yes 0 0 No -32 0.49 No 46 76.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32951261 + NM_000059 BRCA2 0 . . . 0.82 65.43 26 4.62 No 36 0.61 No 0 0 No -27 0.58 No 47 47.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108210757 + NM_000051 ATM 0 . . . 1.29 59.74 25 4.9 No 76 -2.95 No 0 0 No -22 0.63 No 46 48.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59847075 - NM_032043 BRIP1 0 . . . 3.53 78.99 21 4.98 No 59 0.87 Yes 0 0 No -50 0.66 No 50 64.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105196317 + NM_021930 RINT1 0 . . . 2.13 69.48 36 5.28 No 33 -3.01 No 0 0 No -25 0.61 No 43 59.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68592114 + NM_133509 RAD51B 0 . . . 0.78 72.67 24 4.79 No 74 0.07 No 0 0 No -16 0.31 No 50 62.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104178809 - NM_001100119 XRCC3 0 . . . 4.54 83.82 61 8.88 Yes 29 1.38 Yes 0 0 No -56 0.38 No 48 38.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89700650 + NM_000314 PTEN 0 . . . 8 90.86 40 7.82 Yes 36 1.84 Yes 0 0 No -26 0.4 No 22 94.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68693236 + NM_133509 RAD51B 0 . . . 6.64 78.04 22 4.68 No 70 -2.75 No 0 0 No -21 0.82 Yes 33 74.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104168184 - NM_001100119 XRCC3 0 . . . 3.61 84.17 23 4.81 No 13 -1.55 No 0 0 No -22 0.62 No 46 61.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59912298 - NM_032043 BRIP1 0 . . . 2.4 66.99 19 5.83 Yes 9 0.57 No 0 0 No -27 0.81 Yes 48 69.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68606784 + NM_133509 RAD51B 0 . . . 2.6 69.94 40 4.68 No 2 1.71 Yes 0 0 No -39 0.6 No 45 34.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89629193 + NM_000314 PTEN 0 . . . 1.41 75.58 15 5.2 No 60 -2.1 No 0 0 No -30 0.3 No 42 62.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68763023 + NM_133509 RAD51B 0 . . . 3.03 0 15 5.29 No 46 -1.84 No 0 0 No -22 0.65 No 41 50.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7563781 - NM_000546 TP53 0 . . . 0.13 0 11 4.12 No -1 0.81 Yes 0 0 No -18 0.56 No 11 62.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68971971 + NM_133509 RAD51B 0 . . . 3.48 74.34 18 5.34 No 6 1.15 Yes 0 0 No -22 0.77 Yes 52 70.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68901038 + NM_133509 RAD51B 0 . . . 6.26 85.99 26 4.84 No 45 -2.34 No 0 0 No -25 0.69 Yes 44 77.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215667171 - NM_000465 BARD1 0 . . . 3.03 61.4 28 5.57 Yes 72 -6.13 No 0 0 No -27 0.76 Yes 40 69.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68497020 + NM_133509 RAD51B 0 . . . 5.55 81.88 17 5.46 No 38 1.96 Yes 0 0 No -27 0.41 No 48 78.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68937604 + NM_133509 RAD51B 0 . . . 6.06 74.44 16 4.69 No 72 1.46 Yes 0 0 No -57 0.7 Yes 57 47.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108197892 + NM_000051 ATM 0 . . . 3.8 71.73 34 6.32 Yes -3 0.27 No 0 0 No -36 0.74 Yes 35 56.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69060676 + NM_133509 RAD51B 0 . . . 1.48 65.54 12 4.69 No 71 0.75 No 0 0 No -54 0.37 No 42 66.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68498663 + NM_133509 RAD51B 0 . . . 5.24 70.81 27 5.08 No 37 0.91 Yes 0 0 No -45 0.65 No 21 50.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131949081 + NM_005732 RAD50 0 . . . 2.38 70.14 33 5.3 No 76 -6.22 No 0 0 No -32 0.51 No 51 59.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68821876 + NM_133509 RAD51B 0 . . . 2.56 61.9 19 5 No 64 -2.64 No 0 0 No -18 0.54 No 39 86.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68562444 + NM_133509 RAD51B 0 . . . 0.32 74.68 27 5.2 No 22 0.12 No 0 0 No -26 0.69 Yes 36 50.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190714495 + NM_000534 PMS1 0 . . . 2.7 73.81 9 4.19 No 33 1.09 Yes 0 0 No -17 0.33 No 52 61.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68889700 + NM_133509 RAD51B 0 . . . 0.62 76.58 22 6.24 Yes 6 0.73 No 0 0 No -21 0.94 Yes 48 86.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108101464 + NM_000051 ATM 0 . . . 5.37 80.22 14 5.48 No 19 0.81 Yes 0 0 No -26 0.54 No 49 85.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68363013 + NM_133509 RAD51B 0 . . . 0.24 51.85 20 5.08 No 12 1.61 Yes 0 0 No -19 0.64 No 46 79.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47745887 + NM_000251 MSH2 0 . . . 10.67 90.42 36 6.84 Yes 22 0.32 No 0 0 No -23 0.51 No 51 37.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41012544 + NM_001164269 RAD51 0 . . . 3.6 65.68 24 5.1 No 24 1.32 Yes 0 0 No -23 0.56 No 44 77.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68592792 + NM_133509 RAD51B 0 . . . 6.53 76.65 22 3.96 No 23 0.75 No 0 0 No -21 0.89 Yes 35 83.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47662128 + NM_000251 MSH2 0 . . . 9.8 85.34 26 5.66 Yes 18 0.96 Yes 0 0 No -25 0.6 No 40 82.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56783347 + NM_058216 RAD51C 0 . . . 0.45 71.35 18 5.78 Yes 71 -5.52 No 0 0 No -17 0.52 No 49 88.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89656828 + NM_000314 PTEN 0 . . . 3.97 84.41 29 5.55 No 16 1.17 Yes 0 0 No -28 0.71 Yes 42 95.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1221143 + NM_000455 STK11 0 . . . 5.19 67.62 10 4 No 60 -1.51 No 0 0 No -23 0.41 No 44 47.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108203363 + NM_000051 ATM 0 . . . 2.65 80.05 26 5.48 No 9 1.12 Yes 0 0 No -25 0.89 Yes 42 71.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105179750 + NM_021930 RINT1 0 . . . 1.03 63.34 26 5.86 Yes 9 1.27 Yes 0 0 No -25 0.68 Yes 38 93.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68671586 + NM_133509 RAD51B 0 . . . 7.18 78.39 21 3.8 No 24 0.23 No 0 0 No -20 0.81 Yes 45 55.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131894816 + NM_005732 RAD50 0 . . . 6.87 78.3 36 7.18 Yes 24 0.8 Yes 0 0 No -27 0.85 Yes 45 79.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68809668 + NM_133509 RAD51B 0 . . . 6.66 77.77 21 4.79 No 9 0.68 No 0 0 No -20 0.93 Yes 45 65.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215672743 - NM_000465 BARD1 0 . . . 3.44 74.61 33 5.12 No 66 0.51 No 0 0 No -28 0.56 No 46 61.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89622870 + NM_000314 PTEN 0 . . . 9.48 82.3 20 6.32 Yes 14 1.17 Yes 0 0 No -19 0.77 Yes 44 93.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37065614 + NM_000249 MLH1 0 . . . 1.82 66.51 37 8.58 Yes 0 0.03 No 0 0 No -36 0.64 No 41 78.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68993267 + NM_133509 RAD51B 0 . . . 6.33 81.9 21 3.95 No 45 0.39 No 0 0 No -25 0.5 No 27 53.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68518530 + NM_133509 RAD51B 0 . . . 4.08 84.42 18 5.58 Yes 37 1.12 Yes 0 0 No -54 0.54 No 21 64.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108210861 + NM_000051 ATM 0 . . . 4.83 78.26 31 6.97 Yes 52 -2.64 No 0 0 No -30 0.44 No 50 67.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68955331 + NM_133509 RAD51B 0 . . . 0.77 77.42 22 4.69 No 36 1.12 Yes 0 0 No -21 0.97 Yes 48 67.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190710270 + NM_000534 PMS1 0 . . . 4.03 70.6 19 5 No 18 0.33 No 0 0 No -41 0.33 No 46 41.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68631994 + NM_133509 RAD51B 0 . . . 6.95 80.68 34 5.92 Yes 12 0.21 No 0 0 No -28 0.6 No 40 47.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59754892 - NM_032043 BRIP1 0 . . . 3.65 63.98 43 4.69 No 47 0.17 No 0 0 No -34 0.71 Yes 48 61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68989733 + NM_133509 RAD51B 0 . . . 7.18 75.52 19 5.48 No 12 1.75 Yes 0 0 No -21 0.56 No 46 95.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68522840 + NM_133509 RAD51B 0 . . . 5.63 77.07 17 4.8 No 6 0.48 No 0 0 No -22 0.58 No 48 74.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59933882 - NM_032043 BRIP1 0 . . . 5.74 80.39 25 5.23 No 8 0.74 No 0 0 No -24 0.43 No 38 81.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29133076 - NM_001005735 CHEK2 0 . . . 8.96 80.52 74 7.5 Yes 30 0.54 No 0 0 No -28 0.77 Yes 45 82.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68476926 + NM_133509 RAD51B 0 . . . 6.55 75.27 10 3.68 No 10 0.82 Yes 0 0 No -28 0.7 Yes 48 71.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68373377 + NM_133509 RAD51B 0 . . . 8.36 86.73 46 6.76 Yes 3 0.03 No 0 0 No -25 0.77 Yes 47 72.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68476267 + NM_133509 RAD51B 0 . . . 6.21 76.46 35 6.07 Yes 0 1.27 Yes 0 0 No -34 0.74 Yes 37 85.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47744129 + NM_000251 MSH2 0 . . . 3.23 66.82 25 5.47 No 25 0.9 Yes 0 0 No -24 0.86 Yes 33 76.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68833140 + NM_133509 RAD51B 0 . . . 0.21 62.47 10 4 No 44 1.01 Yes 0 0 No -28 0.81 Yes 64 23.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68388197 + NM_133509 RAD51B 0 . . . 7.61 67.11 18 4.9 No 54 1.18 Yes 0 0 No -34 0.58 No 41 58.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48025298 + NM_000179 MSH6 0 . . . 1.78 71.29 13 6 Yes 8 0.44 No 0 0 No -29 0.65 No 50 84.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89684004 + NM_000314 PTEN 0 . . . 3.58 76.95 45 6.71 Yes 13 0.93 Yes 0 0 No -44 0.68 Yes 45 90.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215608354 - NM_000465 BARD1 0 . . . 0.68 76.63 20 7.14 Yes 58 -3.88 No 0 0 No -19 0.74 Yes 48 34.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47698400 + NM_000251 MSH2 0 . . . 2.87 72.95 35 6.4 Yes 75 0.47 No 0 0 No -18 0.62 No 51 53.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190719520 + NM_000534 PMS1 0 . . . 1.03 67.59 19 4.93 No 66 -5.53 No 0 0 No -24 0.47 No 42 38.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68946721 + NM_133509 RAD51B 0 . . . 5.36 83.68 41 6.78 Yes 72 0.73 No 0 0 No -21 0.39 No 48 69.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108195374 + NM_000051 ATM 0 . . . 2.23 79.61 20 7.14 Yes 8 0.57 No 0 0 No -19 0.6 No 50 87.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68688678 + NM_133509 RAD51B 0 . . . 2.22 78.2 17 5.53 No -4 0.35 No 0 0 No -21 0.44 No 52 80.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69090034 + NM_133509 RAD51B 0 . . . 2.08 66.51 20 6.16 Yes 58 -3.75 No 0 0 No -19 0.71 Yes 55 49.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215597752 - NM_000465 BARD1 0 . . . 1.41 73.12 12 4.12 No 72 0.38 No 0 0 No -26 0.51 No 48 87.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215602750 - NM_000465 BARD1 0 . . . 1.79 75.66 49 8.08 Yes 4 0.36 No 0 0 No -34 0.56 No 49 44.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68742684 + NM_133509 RAD51B 0 . . . 4.3 75.25 19 4.01 No 70 0.31 No 0 0 No -19 0.6 No 44 63.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108145529 + NM_000051 ATM 0 . . . 1.98 0 21 5.47 No 25 0.88 Yes 0 0 No -24 0.34 No 33 87.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29118223 - NM_001005735 CHEK2 0 . . . 9.3 86.95 15 5.39 No 73 0.98 Yes 0 0 No -28 0.79 Yes 46 69.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108166855 + NM_000051 ATM 0 . . . 0.75 62.98 34 6.68 Yes 56 0.09 No 0 0 No -33 0.52 No 38 67.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68854597 + NM_133509 RAD51B 0 . . . 3.78 72.01 43 7 Yes -3 0.24 No 0 0 No -23 0.69 Yes 42 74.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68696960 + NM_133509 RAD51B 0 . . . 0.56 66.5 26 4.89 No -4 1.02 Yes 0 0 No -20 0.56 No 38 42.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32975351 + NM_000059 BRCA2 0 . . . 2.21 0 21 4.46 No 13 1.91 Yes 0 0 No -20 0.86 Yes 45 90.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131953317 + NM_005732 RAD50 0 . . . 0.83 0 23 6.94 Yes 12 0.6 No 0 0 No -22 0.67 Yes 46 48.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68838716 + NM_004360 CDH1 0 . . . 2.12 70.15 61 7.83 Yes 47 1.19 Yes 0 0 No -26 0.53 No 37 60.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108104706 + NM_000051 ATM 0 . . . 3.96 76.79 29 6.7 Yes -2 0.56 No 0 0 No -28 0.94 Yes 48 58.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94154197 - NM_005591 MRE11 0 . . . 2.99 84.41 16 5.48 No 60 1.21 Yes 0 0 No -21 0.55 No 45 92.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68814868 + NM_004360 CDH1 0 . . . 0.66 68.69 51 6.29 Yes 26 0.48 No 0 0 No -22 0.55 No 52 40.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68983276 + NM_133509 RAD51B 0 . . . 2.22 0 38 5.42 No 38 1.22 Yes 0 0 No -37 0.87 Yes 57 51.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131980779 + NM_005732 RAD50 0 . . . 7.28 79.19 23 4.61 No 44 1.4 Yes 0 0 No -22 0.82 Yes 49 93.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48008673 + NM_000179 MSH6 0 . . . 3.89 84.17 23 7.31 Yes 54 -0.81 No 0 0 No -23 0.81 Yes 23 60.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68468274 + NM_133509 RAD51B 0 . . . 5.78 77.09 26 6.4 Yes 34 1.12 Yes 0 0 No -25 0.91 Yes 37 57.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68462351 + NM_133509 RAD51B 0 . . . 4.35 84.41 22 6.24 Yes 22 1.86 Yes 0 0 No -21 0.94 Yes 36 77.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21984168 - NM_000077 CDKN2A 0 . . . 3.94 74.97 13 4.74 No 45 -2.23 No 0 0 No -23 0.62 No 43 42.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41020828 + NM_001164269 RAD51 0 . . . 10.42 87.66 33 4.54 No 26 0.44 No 0 0 No -26 0.38 No 43 68.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90973881 - NM_002485 NBN 0 . . . 5.32 0 22 5.98 Yes 56 0.11 No 0 0 No -21 0.85 Yes 53 61.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94179381 - NM_005591 MRE11 0 . . . 0.42 74.73 34 5.61 Yes 33 0.42 No 0 0 No -21 0.41 No 15 81.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108238962 + NM_000051 ATM 0 . . . 2.92 73.84 13 4.46 No 66 -3.69 No 0 0 No -24 0.6 No 41 80.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56794280 + NM_058216 RAD51C 0 . . . 5.21 84.22 49 5.62 Yes 38 1.23 Yes 0 0 No -32 0.7 Yes 50 91.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68688016 + NM_133509 RAD51B 0 . . . 0.67 69.61 22 5.66 Yes 52 -4.5 No 0 0 No -21 0.67 Yes 45 55.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47703167 + NM_000251 MSH2 0 . . . 1.48 76.83 26 5.29 No 5 1.24 Yes 0 0 No -28 0.41 No 39 50.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131905718 + NM_005732 RAD50 0 . . . 4.15 74.28 40 7.21 Yes 71 -5.49 No 0 0 No -39 0.8 Yes 44 72.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68724719 + NM_133509 RAD51B 0 . . . 1.65 65.75 23 5.15 No 37 1.5 Yes 0 0 No -22 0.76 Yes 42 83.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59765971 - NM_032043 BRIP1 0 . . . 5 89.7 11 3.87 No 3 1.59 Yes 0 0 No -28 0.86 Yes 42 97.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59787453 - NM_032043 BRIP1 0 . . . 2.56 74.51 14 4.36 No 68 0.56 No 0 0 No -29 0.64 No 46 50.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68990448 + NM_133509 RAD51B 0 . . . 0.12 0 15 5.42 No 66 0.92 Yes 0 0 No -45 0.83 Yes 29 27.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108112918 + NM_000051 ATM 0 . . . 2.32 0 17 4.8 No 74 0.26 No 0 0 No -24 0.4 No 51 26.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47726729 + NM_000251 MSH2 0 . . . 2.08 71.06 14 5.09 No 76 0.74 No 0 0 No -19 0.43 No 42 36.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68705063 + NM_133509 RAD51B 0 . . . 7.59 82.73 39 6.55 Yes 16 -1.65 No 0 0 No -38 0.78 Yes 43 60.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7587429 - NM_000546 TP53 0 . . . 5.14 69.18 38 4.97 No -3 1.37 Yes 0 0 No -37 0.78 Yes 47 83.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59932601 - NM_032043 BRIP1 0 . . . 3.99 71.77 42 6.87 Yes 18 0.46 No 0 0 No -29 0.79 Yes 40 79.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21980793 - NM_000077 CDKN2A 0 . . . 4.9 83.88 54 8.42 Yes 5 1.22 Yes 0 0 No -29 0.26 No 53 81.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75485168 - NM_001040108 MLH3 0 . . . 2.01 70.06 22 5 No 39 -0.96 No 0 0 No -21 0.87 Yes 54 42.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23616103 - NM_024675 PALB2 0 . . . 0.17 62.12 20 4.9 No 59 0.78 Yes 0 0 No -22 0.89 Yes 21 20.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59817481 - NM_032043 BRIP1 0 . . . 5.9 79.17 21 4.79 No 58 1.5 Yes 0 0 No -20 0.81 Yes 49 61.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6038377 - NM_000535 PMS2 0 . . . 0.91 68.34 16 4.69 No 21 1.1 Yes 0 0 No -21 0.42 No 45 38.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94211694 - NM_005591 MRE11 0 . . . 8.53 80.27 13 7.14 Yes 34 0.32 No 0 0 No -28 0.69 Yes 45 78.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37047161 + NM_000249 MLH1 0 . . . 4.61 73.19 34 6.21 Yes 53 0.98 Yes 0 0 No -33 0.54 No 50 65.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68686846 + NM_133509 RAD51B 0 . . . 0.53 64.26 28 5.36 No 4 0.19 No 0 0 No -27 0.68 Yes 48 38.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94176296 - NM_005591 MRE11 0 . . . 3.39 78.94 22 5.29 No 22 1.07 Yes 0 0 No -49 0.47 No 52 51.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94202066 - NM_005591 MRE11 0 . . . 1.61 65.04 17 4.8 No 70 0.63 No 0 0 No -16 0.51 No 36 45.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47795440 + NM_000251 MSH2 0 . . . 0.96 0 17 5.47 No 29 0.65 No 0 0 No -23 0.76 Yes 48 73.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69068385 + NM_133509 RAD51B 0 . . . 3.76 69.39 23 5.39 No 10 1.15 Yes 0 0 No -22 0.75 Yes 48 91.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47665974 + NM_000251 MSH2 0 . . . 9.58 85.91 16 5.58 Yes 31 -2.11 No 0 0 No -28 0.65 No 52 75.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59866288 - NM_032043 BRIP1 0 . . . 9.29 86.62 30 5.25 No 9 0.89 Yes 0 0 No -29 0.47 No 49 94.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68437212 + NM_133509 RAD51B 0 . . . 7.4 79.9 42 6.69 Yes -3 1.18 Yes 0 0 No -41 0.5 No 45 46.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68508205 + NM_133509 RAD51B 0 . . . 6.78 78.67 14 3.96 No 19 1.17 Yes 0 0 No -46 0.31 No 39 87.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68795728 + NM_004360 CDH1 0 . . . 0.46 69.11 12 5.39 No -1 1.06 Yes 0 0 No -28 0.32 No 59 66.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59858121 - NM_032043 BRIP1 0 . . . 5.08 77.53 19 4.97 No 0 1.34 Yes 0 0 No -29 0.82 Yes 45 84.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32898967 + NM_000059 BRCA2 0 . . . 4.36 0 18 3.25 No 6 1.47 Yes 0 0 No -59 0.45 No 52 64.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68475706 + NM_133509 RAD51B 0 . . . 8.23 78.57 20 6.08 Yes 4 0.88 Yes 0 0 No -19 0.76 Yes 40 63.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68666853 + NM_133509 RAD51B 0 . . . 0.46 78.03 30 7.21 Yes 70 -5.87 No 0 0 No -29 0.9 Yes 51 31.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59827853 - NM_032043 BRIP1 0 . . . 8.56 83.05 27 5.4 No 60 0.93 Yes 0 0 No -26 0.96 Yes 52 62.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29097132 - NM_001005735 CHEK2 0 . . . 5.37 72.1 23 4.42 No 64 -3.2 No 0 0 No -22 0.96 Yes 61 42.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75485513 - NM_001040108 MLH3 0 . . . 1.91 79.46 22 5.87 Yes -4 0.13 No 0 0 No -21 0.88 Yes 49 53.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89694893 + NM_000314 PTEN 0 . . . 6.71 76.89 21 4.99 No 3 0.12 No 0 0 No -20 0.75 Yes 45 88.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68675896 + NM_133509 RAD51B 0 . . . 9.82 84.16 21 5.09 No 21 0.04 No 0 0 No -33 0.39 No 37 89.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69004823 + NM_133509 RAD51B 0 . . . 7.6 84.82 24 5.92 Yes 5 2.11 Yes 0 0 No -24 0.47 No 43 86.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47640028 + NM_000251 MSH2 0 . . . 6.27 85.02 15 4.68 No 7 1.22 Yes 0 0 No -25 0.85 Yes 51 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68773148 + NM_133509 RAD51B 0 . . . 0.08 73.36 23 5.39 No 65 0.31 No 0 0 No -20 0.41 No 44 84.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47793129 + NM_000251 MSH2 0 . . . 7.17 86.77 23 5.29 No 71 1.13 Yes 0 0 No -22 0.68 Yes 39 74.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68819031 + NM_004360 CDH1 0 . . . 3.12 71.77 17 4.69 No 27 0.8 Yes 0 0 No -21 0.28 No 31 82.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68525180 + NM_133509 RAD51B 0 . . . 3.9 72.1 14 4.47 No 30 1.43 Yes 0 0 No -25 0.49 No 45 70.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75511009 - NM_001040108 MLH3 0 . . . 2.67 62.65 26 5.09 No 58 0.31 No 0 0 No -26 0.75 Yes 47 53.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47760599 + NM_000251 MSH2 0 . . . 5.29 84.52 21 5.74 Yes 54 -2.62 No 0 0 No -20 0.6 No 48 78.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41246098 - NM_007294 BRCA1 0 . . . 2.99 72.47 19 5 No 69 -2.32 No 0 0 No -24 0.71 Yes 41 60.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215635852 - NM_000465 BARD1 0 . . . 2.25 0 24 5.24 No 20 -2.49 No 0 0 No -24 0.6 No 53 71.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68506031 + NM_133509 RAD51B 0 . . . 0.17 74.68 33 6.21 Yes 52 0.57 No 0 0 No -32 0.71 Yes 23 48.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90961611 - NM_002485 NBN 0 . . . 0.01 65.19 21 5.2 No 53 0.18 No 0 0 No -20 0.75 Yes 43 65.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215659980 - NM_000465 BARD1 0 . . . 3.58 79.83 33 6.02 Yes 48 0.84 Yes 0 0 No -32 0.67 Yes 39 63.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47744426 + NM_000251 MSH2 0 . . . 5.49 81.12 31 5.68 Yes 63 1.73 Yes 0 0 No -30 0.75 Yes 52 87.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131902563 + NM_005732 RAD50 0 . . . 4.43 80.81 28 4.5 No 0 1.11 Yes 0 0 No -20 0.43 No 35 78.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41247139 - NM_007294 BRCA1 0 . . . 5.82 75.83 11 5.48 No 18 1.3 Yes 0 0 No -23 0.82 Yes 40 91.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68799519 + NM_004360 CDH1 0 . . . 3.35 71.79 15 4.58 No 73 -3.49 No 0 0 No -31 0.44 No 49 60.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68312051 + NM_133509 RAD51B 0 . . . 6.56 75.57 27 5.59 Yes 62 0.9 Yes 0 0 No -27 0.66 No 49 77.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68486411 + NM_133509 RAD51B 0 . . . 3.12 72.99 23 5.61 Yes 73 -4.49 No 0 0 No -22 0.79 Yes 43 65.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215674897 - NM_000465 BARD1 0 . . . 1.72 0 17 5.74 Yes -3 0.63 No 0 0 No -19 0.58 No 43 24.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68938473 + NM_133509 RAD51B 0 . . . 2.63 0 22 5.07 No 18 -0.06 No 0 0 No -21 0.7 Yes 37 26.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41267763 - NM_007294 BRCA1 0 . . . 2.65 71.68 30 6.61 Yes 63 1.21 Yes 0 0 No -29 0.68 Yes 46 83.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89684401 + NM_000314 PTEN 0 . . . 5.32 70.54 26 5.38 No -3 1.23 Yes 0 0 No -26 0.82 Yes 46 57.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68918420 + NM_133509 RAD51B 0 . . . 1.74 69.95 28 3.96 No 2 0.13 No 0 0 No -27 0.8 Yes 38 45.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32935934 + NM_000059 BRCA2 0 . . . 5.66 79.24 30 5.57 Yes 4 0.41 No 0 0 No -29 0.68 Yes 34 82.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68344839 + NM_133509 RAD51B 0 . . . 3.04 83.38 21 7.05 Yes 35 0.62 No 0 0 No -31 0.49 No 39 49.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131943364 + NM_005732 RAD50 0 . . . 2.32 66.5 28 5.12 No 52 0.33 No 0 0 No -27 0.78 Yes 55 52.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68516143 + NM_133509 RAD51B 0 . . . 0.96 65.1 31 5.39 No 6 1 Yes 0 0 No -30 0.42 No 51 82.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68670949 + NM_133509 RAD51B 0 . . . 4.34 64.76 32 5.28 No 42 1.77 Yes 0 0 No -25 0.63 No 44 64.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68829662 + NM_004360 CDH1 0 . . . 2.11 68.34 25 5.14 No 23 0.88 Yes 0 0 No -20 0.85 Yes 40 65.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68586691 + NM_133509 RAD51B 0 . . . 7.62 82.12 24 5.29 No 20 0.58 No 0 0 No -23 0.81 Yes 38 49.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69085506 + NM_133509 RAD51B 0 . . . 0.33 70.97 43 6.73 Yes 66 1.91 Yes 0 0 No -25 0.34 No 46 58.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68303932 + NM_133509 RAD51B 0 . . . 3.45 82.26 18 5.29 No 73 -3.94 No 0 0 No -18 0.55 No 35 50.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89694110 + NM_000314 PTEN 0 . . . 2.85 67 10 4 No 67 1.1 Yes 0 0 No -22 0.91 Yes 43 77.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68357312 + NM_133509 RAD51B 0 . . . 3.35 77.18 9 4.35 No 20 2.09 Yes 0 0 No -44 0.45 No 49 55.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21968111 - NM_000077 CDKN2A 0 . . . 2.8 0 35 5.82 Yes 68 -2.56 No 0 0 No -23 0.65 No 39 43.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68292130 + NM_133509 RAD51B 0 . . . 5.39 79.95 26 6.23 Yes 62 0.2 No 0 0 No -25 0.7 Yes 45 64.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190710114 + NM_000534 PMS1 0 . . . 6.46 79.6 36 5.63 Yes 23 0.71 No 0 0 No -23 0.62 No 39 65.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59894942 - NM_032043 BRIP1 0 . . . 3.33 80.31 55 9.11 Yes 74 -6.19 No 0 0 No -22 0.42 No 48 40.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1224610 + NM_000455 STK11 0 . . . 0.2 0 27 4.94 No 15 1.91 Yes 0 0 No -26 0.48 No 43 77.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59817535 - NM_032043 BRIP1 0 . . . 6.96 83.39 12 5.38 No 4 1.57 Yes 0 0 No -22 0.26 No 41 58.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104162981 - NM_001100119 XRCC3 0 . . . 3.86 71.33 50 5.64 Yes 45 -3.21 No 0 0 No -22 0.61 No 47 41.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68536170 + NM_133509 RAD51B 0 . . . 1.2 72.62 45 7.45 Yes 15 1.75 Yes 0 0 No -24 0.55 No 43 91.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37059891 + NM_000249 MLH1 0 . . . 2.12 69.44 17 4.8 No 67 0.72 No 0 0 No -23 0.46 No 47 61.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59808518 - NM_032043 BRIP1 0 . . . 0.01 0 24 5.29 No -3 0.15 No 0 0 No -23 0.79 Yes 38 34.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59771274 - NM_032043 BRIP1 0 . . . 6.79 68.52 17 4.69 No 75 -5.43 No 0 0 No -19 0.67 Yes 47 91.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59928930 - NM_032043 BRIP1 0 . . . 4.05 74.63 18 4.69 No 66 -5.77 No 0 0 No -36 0.52 No 48 84.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215590165 - NM_000465 BARD1 0 . . . 4.83 82.9 29 5.66 Yes 53 0.76 No 0 0 No -28 0.78 Yes 55 40.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68357031 + NM_133509 RAD51B 0 . . . 6.57 88.96 21 4.04 No 4 0.13 No 0 0 No -26 0.48 No 54 73.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215670506 - NM_000465 BARD1 0 . . . 7.46 73.23 25 5.39 No 53 1.29 Yes 0 0 No -22 0.73 Yes 49 70.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68871773 + NM_133509 RAD51B 0 . . . 1.65 72.9 21 7.07 Yes 71 -5.87 No 0 0 No -20 0.78 Yes 37 89.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104162967 - NM_001100119 XRCC3 0 . . . 1.03 76.52 34 5.89 Yes 59 -4.1 No 0 0 No -21 0.4 No 48 44.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68307727 + NM_133509 RAD51B 0 . . . 0.42 74.73 21 6.15 Yes 31 1.01 Yes 0 0 No -20 0.72 Yes 22 43.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41233264 - NM_007294 BRCA1 0 . . . 5.19 0 16 6.86 Yes 15 1.2 Yes 0 0 No -28 0.47 No 46 54.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89624469 + NM_000314 PTEN 0 . . . 8.27 76.35 16 3.86 No 25 0.07 No 0 0 No -28 0.36 No 37 55.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68708707 + NM_133509 RAD51B 0 . . . 6.22 73.6 18 4.79 No 1 0.69 No 0 0 No -29 0.32 No 51 90.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68655446 + NM_133509 RAD51B 0 . . . 0.62 61.96 27 5.74 Yes 48 1.08 Yes 0 0 No -26 0.53 No 47 42.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68481621 + NM_133509 RAD51B 0 . . . 4.69 82.98 18 5 No 12 0.62 No 0 0 No -24 0.69 Yes 46 94.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56809441 + NM_058216 RAD51C 0 . . . 4.99 80 36 6.92 Yes 3 0.95 Yes 0 0 No -35 0.89 Yes 45 69.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68574331 + NM_133509 RAD51B 0 . . . 1.04 0 44 6.8 Yes 53 0.9 Yes 0 0 No -28 0.67 Yes 44 35.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68895745 + NM_133509 RAD51B 0 . . . 6.29 71.88 28 8.37 Yes 42 -1.32 No 0 0 No -27 0.93 Yes 42 68.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47797183 + NM_000251 MSH2 0 . . . 0.27 62.62 23 5.26 No NA NA NA 0 0 No -36 0.54 No 55 17.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47637705 + NM_000251 MSH2 0 . . . 1.86 72.76 22 5.29 No 62 -4.17 No 0 0 No -21 0.65 No 48 45.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68802345 + NM_004360 CDH1 0 . . . 4.05 0 29 3.83 No 24 0.3 No 0 0 No -28 0.76 Yes 46 85.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69089816 + NM_133509 RAD51B 0 . . . 3.88 81.03 18 4.8 No 58 -0.86 No 0 0 No -22 0.76 Yes 51 45.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190712884 + NM_000534 PMS1 0 . . . 5.57 73.92 20 5.1 No 75 -4.64 No 0 0 No -19 0.5 No 43 56.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32954863 + NM_000059 BRCA2 0 . . . 3.73 80.12 23 4.78 No 75 0.9 Yes 0 0 No -21 0.8 Yes 40 71.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131940759 + NM_005732 RAD50 0 . . . 0.49 83.57 21 4.69 No 17 0.57 No 0 0 No -20 0.97 Yes 41 72.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108139234 + NM_000051 ATM 0 . . . 3.39 74.91 16 5.41 No 0 1.08 Yes 0 0 No -27 0.63 No 37 93.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59795889 - NM_032043 BRIP1 0 . . . 0.75 67.25 16 4.69 No NA NA NA 0 0 No -33 0.42 No 53 52.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32945812 + NM_000059 BRCA2 0 . . . 5 61.37 30 6 Yes 17 0.71 No 0 0 No -27 0.46 No 41 84.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47760072 + NM_000251 MSH2 0 . . . 2.07 73.29 21 4.8 No 46 -1.98 No 0 0 No -48 0.57 No 44 71.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47762286 + NM_000251 MSH2 0 . . . 9.15 86.73 25 5.57 Yes 23 0.64 No 0 0 No -24 0.66 No 41 81.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89686214 + NM_000314 PTEN 0 . . . 2.32 76.35 45 6.85 Yes 44 1.26 Yes 0 0 No -40 0.41 No 51 70.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21972916 - NM_000077 CDKN2A 0 . . . 4.31 71.34 25 5.06 No 26 0.48 No 0 0 No -28 0.55 No 44 84.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68741882 + NM_133509 RAD51B 0 . . . 4.86 78.9 12 5.1 No 64 0.79 Yes 0 0 No -26 0.35 No 45 70.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190742446 + NM_000534 PMS1 0 . . . 5.48 79.17 32 4.78 No 75 -3.62 No 0 0 No -24 0.41 No 47 68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52436280 - NM_004656 BAP1 0 . . . 7.25 82.35 47 7.11 Yes 56 1.62 Yes 0 0 No -31 0.49 No 48 34.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68666576 + NM_133509 RAD51B 0 . . . 5.96 75.07 18 3.44 No 12 0.77 Yes 0 0 No -28 0.67 Yes 46 80.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68662107 + NM_133509 RAD51B 0 . . . 3.78 81.48 16 4.69 No 15 0.09 No 0 0 No -23 0.59 No 43 64.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215600587 - NM_000465 BARD1 0 . . . 4.46 75.47 32 4.15 No -1 0.56 No 0 0 No -31 0.61 No 56 48.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68659139 + NM_133509 RAD51B 0 . . . 3.96 78.37 21 5.83 Yes 22 -1.82 No 0 0 No -27 0.54 No 40 73.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59861243 - NM_032043 BRIP1 0 . . . 2.85 77.79 23 6 Yes 41 1.25 Yes 0 0 No -27 0.53 No 17 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94163693 - NM_005591 MRE11 0 . . . 3.8 80.28 39 6.62 Yes 66 -4.38 No 0 0 No -38 0.22 No 43 58.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47654347 + NM_000251 MSH2 0 . . . 6.01 97.62 25 7.96 Yes 13 0.38 No 0 0 No -24 0.8 Yes 45 92.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68594497 + NM_133509 RAD51B 0 . . . 3.26 73.51 18 7 Yes 8 1.03 Yes 0 0 No -17 0.44 No 46 93.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68975362 + NM_133509 RAD51B 0 . . . 5.23 85.91 20 4.9 No 37 1.62 Yes 0 0 No -58 0.38 No 49 47.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131912288 + NM_005732 RAD50 0 . . . 1.66 69.77 43 7.18 Yes 53 0.76 No 0 0 No -42 0.25 No 18 51.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68359395 + NM_133509 RAD51B 0 . . . 2.31 74.43 45 6.74 Yes 10 0.09 No 0 0 No -39 0.68 Yes 48 85.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68370218 + NM_133509 RAD51B 0 . . . 3.52 71.09 15 3.9 No 67 -2.18 No 0 0 No -26 0.68 Yes 40 51.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108125538 + NM_000051 ATM 0 . . . 0.96 77.28 17 4.8 No 73 1.14 Yes 0 0 No -24 0.58 No 59 20.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69003313 + NM_133509 RAD51B 0 . . . 6.52 76.64 18 4.46 No 73 0.69 No 0 0 No -21 0.78 Yes 44 88.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47806739 + NM_000251 MSH2 0 . . . 10.52 89.97 20 7.12 Yes 44 3.03 Yes 0 0 No -25 0.9 Yes 20 64.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56791527 + NM_058216 RAD51C 0 . . . 3.6 85.02 23 5.39 No 4 1.2 Yes 0 0 No -30 0.49 No 45 70.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89643063 + NM_000314 PTEN 0 . . . 0.89 64.18 32 5.65 Yes 7 0.46 No 0 0 No -31 0.39 No 51 66.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37056541 + NM_000249 MLH1 0 . . . 2.58 63.66 32 4.47 No 56 -5.3 No 0 0 No -27 0.79 Yes 56 55.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68400493 + NM_133509 RAD51B 0 . . . 2.36 67.23 27 4.54 No 9 0.33 No 0 0 No -26 0.79 Yes 42 59.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68754752 + NM_133509 RAD51B 0 . . . 4.11 62.03 32 6.16 Yes 41 0.81 Yes 0 0 No -35 0.44 No 37 73.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94173911 - NM_005591 MRE11 0 . . . 1.14 67.43 29 6.32 Yes 1 0.56 No 0 0 No -28 0.83 Yes 54 53.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90974507 - NM_002485 NBN 0 . . . 9.97 83.71 12 3.92 No 12 0.87 Yes 0 0 No -28 0.54 No 46 84.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68407058 + NM_133509 RAD51B 0 . . . 3.6 65.68 19 4.8 No 27 1.59 Yes 0 0 No -18 0.73 Yes 41 69.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131952493 + NM_005732 RAD50 0 . . . 1.96 79.61 21 5.2 No 69 -4.07 No 0 0 No -41 0.77 Yes 37 38.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68644835 + NM_133509 RAD51B 0 . . . 2.52 70.08 17 5.83 Yes 75 1.42 Yes 0 0 No -18 0.57 No 11 77.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68578809 + NM_133509 RAD51B 0 . . . 3.66 0 27 6.38 Yes 55 -2.99 No 0 0 No -26 0.89 Yes 52 78.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21996122 - NM_000077 CDKN2A 0 . . . 0.07 65.84 26 5.31 No 71 -2.42 No 0 0 No -25 0.72 Yes 52 40.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68633422 + NM_133509 RAD51B 0 . . . 5.62 77.63 21 5.1 No 42 0.51 No 0 0 No -20 0.7 Yes 48 50.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6047929 - NM_000535 PMS2 0 . . . 7.56 77.18 19 4.58 No 55 -3.95 No 0 0 No -23 0.64 No 48 80.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68770486 + NM_133509 RAD51B 0 . . . 1.89 71.18 29 5.34 No 39 -0.23 No 0 0 No -28 0.92 Yes 47 43.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68902142 + NM_133509 RAD51B 0 . . . 2.42 66.14 31 5.32 No 59 0.82 Yes 0 0 No -27 0.69 Yes 28 50.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32957672 + NM_000059 BRCA2 0 . . . 6.82 73.51 22 3.87 No 10 0.69 No 0 0 No -21 0.96 Yes 34 77.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7582769 - NM_000546 TP53 0 . . . 1.33 67.03 15 5.05 No 58 1.1 Yes 0 0 No -22 0.51 No 42 57.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89691491 + NM_000314 PTEN 0 . . . 3.38 65.61 45 6.94 Yes 22 1.09 Yes 0 0 No -27 0.67 Yes 32 65.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37063823 + NM_000249 MLH1 0 . . . 0.66 71.99 70 8.62 Yes 60 -5.68 No 0 0 No -33 0.37 No 54 55.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190653591 + NM_000534 PMS1 0 . . . 1.92 67.49 29 6.04 Yes 8 0.05 No 0 0 No -28 0.73 Yes 50 65.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40993911 + NM_001164269 RAD51 0 . . . 5.95 85.18 22 4.69 No 40 0.58 No 0 0 No -21 0.95 Yes 42 86.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69085090 + NM_133509 RAD51B 0 . . . 0.52 60.74 37 6.56 Yes 76 -1.8 No 0 0 No -36 0.62 No 40 57.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32894424 + NM_000059 BRCA2 0 . . . 6.34 64.97 30 5.57 Yes 14 0.15 No 0 0 No -29 0.92 Yes 41 64.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37035466 + NM_000249 MLH1 0 . . . 4.65 78.08 25 4.04 No 42 -3.53 No 0 0 No -24 0.73 Yes 49 78.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68505108 + NM_133509 RAD51B 0 . . . 4.34 83.31 17 5.17 No 34 0.8 Yes 0 0 No -22 0.67 Yes 50 80.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45801483 - NM_001048171 MUTYH 0 . . . 1.74 83.78 17 3.48 No 74 -3.38 No 0 0 No -34 0.6 No 29 63.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47798486 + NM_000251 MSH2 0 . . . 4.58 65.27 19 5.73 Yes 15 1.4 Yes 0 0 No -18 0.6 No 43 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32889282 + NM_000059 BRCA2 0 . . . 3.98 79.6 22 4.8 No 47 1.14 Yes 0 0 No -21 0.97 Yes 51 83.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68353382 + NM_133509 RAD51B 0 . . . 6.98 81.99 20 5.1 No 43 1.21 Yes 0 0 No -19 0.72 Yes 39 79.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68808857 + NM_133509 RAD51B 0 . . . 2.07 81.82 22 5.28 No 40 1.41 Yes 0 0 No -27 0.39 No 31 65.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23625753 - NM_024675 PALB2 0 . . . 0.38 56.72 24 6.2 Yes 61 1.54 Yes 0 0 No -23 0.73 Yes 28 78.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69036820 + NM_133509 RAD51B 0 . . . 1.92 71.57 11 4.8 No 31 1.72 Yes 0 0 No -24 0.69 Yes 27 90.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68792800 + NM_004360 CDH1 0 . . . 2.69 66.46 24 6.21 Yes 16 1.1 Yes 0 0 No -23 0.58 No 42 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69091082 + NM_133509 RAD51B 0 . . . 4.1 69.81 79 7.11 Yes 48 1.09 Yes 0 0 No -24 0.46 No 37 83.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6034122 - NM_000535 PMS2 0 . . . 1.33 71.05 21 6.04 Yes 58 1.66 Yes 0 0 No -20 0.66 No 52 35.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190685697 + NM_000534 PMS1 0 . . . 9.81 79.02 32 4.44 No 42 -2.83 No 0 0 No -31 0.32 No 44 66.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68814037 + NM_004360 CDH1 0 . . . 4.72 79.35 27 5.2 No 60 0.95 Yes 0 0 No -58 0.57 No 23 86.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131899750 + NM_005732 RAD50 0 . . . 6.58 88.91 26 5.66 Yes 8 0.71 No 0 0 No -25 0.93 Yes 46 73.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68663932 + NM_133509 RAD51B 0 . . . 1.01 0 38 4.58 No 45 0.13 No 0 0 No -39 0.43 No 20 47.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56777481 + NM_058216 RAD51C 0 . . . 1.42 70.43 16 6.56 Yes 23 1.5 Yes 0 0 No -25 0.75 Yes 45 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94156145 - NM_005591 MRE11 0 . . . 0.32 74.68 17 3.86 No 47 0.67 No 0 0 No -27 0.7 Yes 54 83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68810213 + NM_004360 CDH1 0 . . . 1.4 82.26 25 6 Yes 73 0.78 Yes 0 0 No -29 0.42 No 47 86.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131972013 + NM_005732 RAD50 0 . . . 11.38 82.48 16 3.98 No 34 0.82 Yes 0 0 No -19 0.43 No 43 53.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68552633 + NM_133509 RAD51B 0 . . . 2.89 71.53 25 5 No 0 1.24 Yes 0 0 No -28 0.88 Yes 49 65.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41246039 - NM_007294 BRCA1 0 . . . 2.1 56.39 22 4.9 No 54 0.18 No 0 0 No -26 0.43 No 39 38.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68723600 + NM_133509 RAD51B 0 . . . 2.18 80.4 25 5.39 No 37 -2.55 No 0 0 No -22 0.74 Yes 41 33.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104163838 - NM_001100119 XRCC3 0 . . . 10.74 91.16 56 7.87 Yes 44 0.36 No 0 0 No -35 0.53 No 54 67.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32902632 + NM_000059 BRCA2 0 . . . 2.4 86.62 15 4.04 No 13 1.52 Yes 0 0 No -23 0.58 No 45 67.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68505014 + NM_133509 RAD51B 0 . . . 2.35 69.07 15 3.49 No 75 -5.3 No 0 0 No -19 0.65 No 52 80.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190738089 + NM_000534 PMS1 0 . . . 5.67 74.26 18 4.79 No 9 0.21 No 0 0 No -17 0.26 No 39 57.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69024416 + NM_133509 RAD51B 0 . . . 2.96 66.53 12 4.69 No 73 -2.75 No 0 0 No -36 0.67 Yes 40 67.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152353147 - NM_005431 XRCC2 0 . . . 6.49 82.7 17 5.83 Yes 15 2.22 Yes 0 0 No -49 0.19 No 43 94.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40999782 + NM_001164269 RAD51 0 . . . 1.64 84.57 32 3.81 No 37 1.55 Yes 0 0 No -27 0.88 Yes 21 38.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32930442 + NM_000059 BRCA2 0 . . . 5.95 75.87 17 6.71 Yes 3 0.45 No 0 0 No -24 0.57 No 43 51.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33439797 - NM_002878 RAD51D 0 . . . 2.73 72.58 14 4.12 No 37 -3.46 No 0 0 No -40 0.53 No 48 80.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68417104 + NM_133509 RAD51B 0 . . . 2.95 70.07 30 5.35 No 69 0.18 No 0 0 No -22 0.9 Yes 37 66.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59798563 - NM_032043 BRIP1 0 . . . 0.14 0 19 5.74 Yes 16 1.34 Yes 0 0 No -18 0.65 No 42 46.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108147001 + NM_000051 ATM 0 . . . 8.33 81.6 23 5.29 No 1 2.29 Yes 0 0 No -18 0.36 No 44 64.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68468616 + NM_133509 RAD51B 0 . . . 3.82 69.24 23 5.1 No 53 0.63 No 0 0 No -22 0.9 Yes 49 75.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68853399 + NM_133509 RAD51B 0 . . . 3.5 71.77 26 5 No 71 2 Yes 0 0 No -25 0.38 No 42 78.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41220796 - NM_007294 BRCA1 0 . . . 3.41 79.43 31 5.91 Yes 13 1.65 Yes 0 0 No -30 0.79 Yes 45 85.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68550044 + NM_133509 RAD51B 0 . . . 3.06 67.87 54 7.18 Yes 37 0.23 No 0 0 No -22 0.56 No 46 42.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68509359 + NM_133509 RAD51B 0 . . . 0.38 81.78 26 7.09 Yes 69 0.27 No 0 0 No -32 0.59 No 26 74.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59913868 - NM_032043 BRIP1 0 . . . 7.2 81.21 20 6.63 Yes 5 1.14 Yes 0 0 No -19 0.76 Yes 53 66.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84393703 - NM_139076 FAM175A 0 . . . 6.84 84.47 34 6.81 Yes 22 0.68 No 0 0 No -33 0.67 Yes 49 86.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108154266 + NM_000051 ATM 0 . . . 4.02 76.13 78 11.06 Yes 69 0.5 No 0 0 No -31 0.75 Yes 48 63.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84389126 - NM_139076 FAM175A 0 . . . 0.11 61.98 25 5.57 Yes 8 0.21 No 0 0 No -24 0.91 Yes 37 76.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68353548 + NM_133509 RAD51B 0 . . . 0.47 69.36 32 5.57 Yes 29 1.21 Yes 0 0 No -31 0.58 No 22 33.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47795981 + NM_000251 MSH2 0 . . . 0.38 63.18 21 5 No 25 0.92 Yes 0 0 No -24 0.47 No 33 77.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69034158 + NM_133509 RAD51B 0 . . . 2.94 73.11 36 5.88 Yes 45 0.8 Yes 0 0 No -33 0.57 No 39 80.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32969891 + NM_000059 BRCA2 0 . . . 6.42 82.86 18 5.74 Yes 34 0.44 No 0 0 No -28 0.56 No 46 75.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108167160 + NM_000051 ATM 0 . . . 4.9 83.88 54 7.74 Yes 5 1.08 Yes 0 0 No -44 0.86 Yes 53 75.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68785616 + NM_004360 CDH1 0 . . . 0.26 70.38 46 7.21 Yes 33 1.16 Yes 0 0 No -45 0.86 Yes 25 54.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84405741 - NM_139076 FAM175A 0 . . . 2.38 74.91 17 5.57 Yes 33 1.22 Yes 0 0 No -24 0.59 No 25 49.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68511708 + NM_133509 RAD51B 0 . . . 0.09 74.68 19 5 No 4 0.41 No 0 0 No -18 0.48 No 54 84.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59847212 - NM_032043 BRIP1 0 . . . 5.23 89.78 19 5.48 No 19 0.6 No 0 0 No -21 0.96 Yes 43 79.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68700208 + NM_133509 RAD51B 0 . . . 4.63 66.87 11 5.19 No 59 0.32 No 0 0 No -26 0.52 No 37 89.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75484926 - NM_001040108 MLH3 0 . . . 5.77 79.83 13 4.36 No -1 -1.63 No 0 0 No -38 0.88 Yes 35 55.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68925616 + NM_133509 RAD51B 0 . . . 0.75 73.15 25 6.1 Yes 67 0.63 No 0 0 No -24 0.86 Yes 42 61.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41236655 - NM_007294 BRCA1 0 . . . 0.43 68.06 24 5.47 No 66 -3.02 No 0 0 No -23 0.47 No 40 46.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047543 + NM_000249 MLH1 0 . . . 2.05 83.95 15 4.47 No 25 1.28 Yes 0 0 No -42 0.8 Yes 33 75.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90986699 - NM_002485 NBN 0 . . . 1.41 72.68 10 4.8 No 65 0.97 Yes 0 0 No -9 0.61 No 47 94.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47694768 + NM_000251 MSH2 0 . . . 2.94 80.12 51 7.44 Yes 63 1.4 Yes 0 0 No -25 0.49 No 51 74.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75501093 - NM_001040108 MLH3 0 . . . 2.46 72.41 44 6.8 Yes 41 0.71 No 0 0 No -26 0.61 No 40 60.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37063086 + NM_000249 MLH1 0 . . . 3.66 77.21 28 5.64 Yes 6 0.5 No 0 0 No -27 0.46 No 51 54.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68493907 + NM_133509 RAD51B 0 . . . 6.67 77.7 16 4.69 No 21 1.17 Yes 0 0 No -36 0.62 No 37 89.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47722491 + NM_000251 MSH2 0 . . . 8.88 84.34 35 6.76 Yes 71 1.77 Yes 0 0 No -34 0.9 Yes 45 47.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84401412 - NM_139076 FAM175A 0 . . . 1.21 59.02 38 6.39 Yes 45 1.11 Yes 0 0 No -25 0.86 Yes 13 39.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90987347 - NM_002485 NBN 0 . . . 0.5 62.51 46 7.21 Yes 14 0.63 No 0 0 No -33 0.8 Yes 30 51.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7572828 - NM_000546 TP53 0 . . . 6.56 79.03 52 8.76 Yes 61 2.13 Yes 0 0 No -33 0.34 No 31 67.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41262954 - NM_007294 BRCA1 0 . . . 3.6 85.02 39 6.67 Yes 4 1.2 Yes 0 0 No -26 0.57 No 47 78.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32962779 + NM_000059 BRCA2 0 . . . 3.67 79.73 23 3.72 No 5 2.1 Yes 0 0 No -22 0.81 Yes 53 46.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105180645 + NM_021930 RINT1 0 . . . 1.41 84.22 16 5.37 No 34 1.44 Yes 0 0 No -58 0.49 No 50 42.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59758371 - NM_032043 BRIP1 0 . . . 2.61 61.53 22 5.29 No 17 1.27 Yes 0 0 No -21 0.87 Yes 35 90.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37044138 + NM_000249 MLH1 0 . . . 7.05 89.92 17 4.69 No 11 0.43 No 0 0 No -56 0.37 No 47 74.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68825350 + NM_004360 CDH1 0 . . . 0.38 0 18 5.23 No 23 1.89 Yes 0 0 No -22 0.72 Yes 35 87.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108211589 + NM_000051 ATM 0 . . . 2.36 67.89 12 5.78 Yes 51 0.85 Yes 0 0 No -30 0.56 No 39 73.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68768918 + NM_133509 RAD51B 0 . . . 0.46 0 29 5.48 No 33 0.54 No 0 0 No -28 0.93 Yes 31 74.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75508858 - NM_001040108 MLH3 0 . . . 1.92 67.74 18 4.58 No -1 0.19 No 0 0 No -17 0.75 Yes 48 59.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68312500 + NM_133509 RAD51B 0 . . . 1.61 79.7 33 4.28 No 35 0.16 No 0 0 No -19 0.81 Yes 26 56.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94149438 - NM_005591 MRE11 0 . . . 1.44 0 15 5.28 No 6 1.03 Yes 0 0 No -45 0.23 No 52 82.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68329778 + NM_133509 RAD51B 0 . . . 0.3 59.09 25 5.2 No 73 0.61 No 0 0 No -24 0.96 Yes 46 69.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41232725 - NM_007294 BRCA1 0 . . . 1.4 74.34 24 3.86 No 30 1.02 Yes 0 0 No -23 0.72 Yes 28 46.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90977600 - NM_002485 NBN 0 . . . 6.4 84.51 23 6.07 Yes -3 0.94 Yes 0 0 No -22 0.77 Yes 25 70.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215647938 - NM_000465 BARD1 0 . . . 4.61 80.54 48 7.07 Yes 46 0.06 No 0 0 No -33 0.78 Yes 50 64.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32939680 + NM_000059 BRCA2 0 . . . 1.6 68.06 23 6.16 Yes 47 0.72 No 0 0 No -22 0.67 Yes 48 74.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89692892 + NM_000314 PTEN 0 . . . 1.39 67.13 19 6.63 Yes 48 -3.95 No 0 0 No -22 0.48 No 30 27.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68927698 + NM_133509 RAD51B 0 . . . 2.52 68.84 39 6.4 Yes 14 1.24 Yes 0 0 No -23 0.73 Yes 40 87.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37066098 + NM_000249 MLH1 0 . . . 4.01 81.42 27 5.74 Yes 4 0.86 Yes 0 0 No -59 0.86 Yes 41 67.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108163711 + NM_000051 ATM 0 . . . 3.38 70.06 27 6.23 Yes 38 -2.2 No 0 0 No -27 0.73 Yes 45 50.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1204157 + NM_000455 STK11 0 . . . 2.24 80.12 31 7.37 Yes 12 1.14 Yes 0 0 No -20 0.54 No 46 88.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68846658 + NM_133509 RAD51B 0 . . . 2.56 65.33 17 4.38 No 33 1.95 Yes 0 0 No -22 0.82 Yes 25 81.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6044129 - NM_000535 PMS2 0 . . . 5.92 82.31 31 4.8 No 57 1.13 Yes 0 0 No -33 0.57 No 43 57.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69010082 + NM_133509 RAD51B 0 . . . 0.65 73.14 57 7.56 Yes 73 1.12 Yes 0 0 No -56 0.32 No 36 44.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68783415 + NM_133509 RAD51B 0 . . . 4.27 72.96 45 8 Yes 11 1.05 Yes 0 0 No -34 0.56 No 47 84.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59839162 - NM_032043 BRIP1 0 . . . 4.89 82.33 22 5.29 No 3 0.57 No 0 0 No -21 0.65 No 47 41.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190720450 + NM_000534 PMS1 0 . . . 6.02 71.54 31 7.67 Yes 64 0.38 No 0 0 No -30 0.86 Yes 44 72.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68538539 + NM_133509 RAD51B 0 . . . 6.58 0 29 5.57 Yes 74 -3.41 No 0 0 No -32 0.34 No 35 46.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32930702 + NM_000059 BRCA2 0 . . . 1.67 69.16 27 4.76 No 76 -1.77 No 0 0 No -26 0.6 No 45 64.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68890259 + NM_133509 RAD51B 0 . . . 1.52 69.15 32 5.83 Yes 66 -3.16 No 0 0 No -31 0.51 No 33 42.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94172361 - NM_005591 MRE11 0 . . . 3.26 72.48 24 4.79 No 44 0.96 Yes 0 0 No -23 0.24 No 48 46.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32933635 + NM_000059 BRCA2 0 . . . 4.07 92.12 29 5.7 Yes 43 1.17 Yes 0 0 No -25 0.63 No 48 74.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68782770 + NM_133509 RAD51B 0 . . . 5.38 75.39 22 4.74 No 12 1.22 Yes 0 0 No -21 0.6 No 46 57.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37080275 + NM_000249 MLH1 0 . . . 1.75 71.29 21 4.9 No 54 1.25 Yes 0 0 No -42 0.27 No 37 50.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37074478 + NM_000249 MLH1 0 . . . 5.93 85.92 35 6.3 Yes 66 -2.59 No 0 0 No -34 0.74 Yes 42 71.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47692934 + NM_000251 MSH2 0 . . . 2.65 63.73 39 6 Yes 55 0.73 No 0 0 No -31 0.34 No 44 53.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69059650 + NM_133509 RAD51B 0 . . . 1.23 70.1 30 4.65 No 45 0.57 No 0 0 No -29 0.81 Yes 13 51.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190674214 + NM_000534 PMS1 0 . . . 3.51 0 16 4.69 No 43 0.12 No 0 0 No -31 0.71 Yes 22 61.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190705594 + NM_000534 PMS1 0 . . . 4.79 70.27 18 4.9 No 40 1.57 Yes 0 0 No -17 0.55 No 45 42.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131897095 + NM_005732 RAD50 0 . . . 1.28 77.24 33 6.23 Yes 33 1.02 Yes 0 0 No -27 0.55 No 25 60.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75489204 - NM_001040108 MLH3 0 . . . 0.14 72.08 13 5.29 No 74 -4.39 No 0 0 No -18 0.27 No 47 35.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68844635 + NM_133509 RAD51B 0 . . . 2.63 72.8 25 5.63 Yes 2 0.41 No 0 0 No -25 0.81 Yes 45 85.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94175117 - NM_005591 MRE11 0 . . . 5.77 81.95 18 4.9 No 43 1.84 Yes 0 0 No -24 0.75 Yes 15 92.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94150008 - NM_005591 MRE11 0 . . . 3.42 84.41 18 4.69 No 58 1.6 Yes 0 0 No -22 0.61 No 33 77.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68963661 + NM_133509 RAD51B 0 . . . 0.91 77.21 20 5.46 No 68 0.87 Yes 0 0 No -19 0.62 No 42 45.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32894517 + NM_000059 BRCA2 0 . . . 2.83 76.98 25 5.57 Yes 7 1.36 Yes 0 0 No -30 0.48 No 51 61.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47642592 + NM_000251 MSH2 0 . . . 1.86 69.53 28 5.36 No 8 0.46 No 0 0 No -27 0.55 No 38 75.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68531900 + NM_133509 RAD51B 0 . . . 7.21 85.81 28 9.9 Yes 45 0.42 No 0 0 No -27 0.86 Yes 38 93.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32956272 + NM_000059 BRCA2 0 . . . 4.7 85.02 14 5.29 No 69 -2.64 No 0 0 No -25 0.5 No 48 69.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68854142 + NM_004360 CDH1 0 . . . 3.06 81.83 9 3.87 No 8 -1.65 No 0 0 No -27 0.58 No 50 50.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59918367 - NM_032043 BRIP1 0 . . . 2.77 68.9 39 4.71 No 59 0.69 No 0 0 No -25 0.6 No 40 66.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94201559 - NM_005591 MRE11 0 . . . 7.55 91.55 19 5 No 38 0.95 Yes 0 0 No -18 0.28 No 49 54.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41003256 + NM_001164269 RAD51 0 . . . 0.65 72.18 26 5.56 Yes 64 0.61 No 0 0 No -25 0.68 Yes 39 52.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68544261 + NM_133509 RAD51B 0 . . . 5.11 74.99 25 5.28 No 0 0.59 No 0 0 No -24 0.57 No 42 78.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1218915 + NM_000455 STK11 0 . . . 4.3 82.13 28 3.98 No 26 0.39 No 0 0 No -25 0.49 No 49 37.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648468 - NM_024675 PALB2 0 . . . 0.78 84.22 15 4.57 No 76 1.46 Yes 0 0 No -31 0.38 No 50 37.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190710477 + NM_000534 PMS1 0 . . . 5.55 83.86 29 6.01 Yes 12 1.16 Yes 0 0 No -28 0.84 Yes 46 82.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41213312 - NM_007294 BRCA1 0 . . . 3.97 84.59 28 5.29 No 4 0.59 No 0 0 No -23 0.44 No 43 84.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68393462 + NM_133509 RAD51B 0 . . . 4.31 85.02 19 4.71 No 4 1.05 Yes 0 0 No -21 0.46 No 54 64.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59877592 - NM_032043 BRIP1 0 . . . 1.87 73.26 18 5.05 No 67 1.23 Yes 0 0 No -22 0.9 Yes 35 75.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68574210 + NM_133509 RAD51B 0 . . . 1.17 72.44 19 4.87 No 76 -6.7 No 0 0 No -25 0.73 Yes 42 76.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68486928 + NM_133509 RAD51B 0 . . . 1.01 67.8 81 7.26 Yes 59 1.12 Yes 0 0 No -47 0.34 No 42 91.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37087566 + NM_000249 MLH1 0 . . . 10.97 95.09 24 4.07 No 49 0.43 No 0 0 No -23 0.49 No 45 79.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6018411 - NM_000535 PMS2 0 . . . 0.1 67.97 21 5.58 Yes 48 0.37 No 0 0 No -29 0.45 No 21 75.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59903047 - NM_032043 BRIP1 0 . . . 5.39 63.45 31 7.09 Yes 47 1.18 Yes 0 0 No -26 0.48 No 47 52.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47736464 + NM_000251 MSH2 0 . . . 6.15 84.38 37 5.97 Yes 14 0.62 No 0 0 No -29 0.77 Yes 48 51.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68827462 + NM_133509 RAD51B 0 . . . 2.48 72.53 20 4.69 No 48 1.65 Yes 0 0 No -20 0.36 No 50 50.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68652429 + NM_133509 RAD51B 0 . . . 7.56 87.89 30 5.87 Yes 74 0.2 No 0 0 No -29 0.56 No 47 79.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41227806 - NM_007294 BRCA1 0 . . . 3.29 79.64 18 4.9 No 75 0.45 No 0 0 No -34 0.22 No 52 72.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68707605 + NM_133509 RAD51B 0 . . . 6.9 72.29 12 4.79 No 67 0.93 Yes 0 0 No -23 0.73 Yes 45 67.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59760234 - NM_032043 BRIP1 0 . . . 0.48 80.49 9 3.87 No 28 1.02 Yes 0 0 No -51 0.35 No 30 50.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68702987 + NM_133509 RAD51B 0 . . . 2.2 79.24 28 5.29 No 40 -4.78 No 0 0 No -18 0.22 No 44 24.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6014725 - NM_000535 PMS2 0 . . . 0.91 76.14 15 4.19 No 18 0.87 Yes 0 0 No -23 0.35 No 47 66.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32899013 + NM_000059 BRCA2 0 . . . 0.91 0 9 5.83 Yes 52 1.49 Yes 0 0 No -27 0.7 Yes 42 69.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105176924 + NM_021930 RINT1 0 . . . 3.02 79.39 20 4.69 No 68 0.91 Yes 0 0 No -17 0.53 No 50 53.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68630571 + NM_133509 RAD51B 0 . . . 1.72 81.13 93 10.41 Yes 20 0.39 No 0 0 No -24 0.53 No 49 83.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69069984 + NM_133509 RAD51B 0 . . . 1.06 0 16 4.47 No 47 0.65 No 0 0 No -13 0.25 No 46 47.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56802606 + NM_058216 RAD51C 0 . . . 6.06 66.78 29 4.05 No 15 1.42 Yes 0 0 No -21 0.7 Yes 43 63.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75494538 - NM_001040108 MLH3 0 . . . 5.27 72.21 24 7.53 Yes 57 1.06 Yes 0 0 No -23 0.78 Yes 17 80.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68832342 + NM_133509 RAD51B 0 . . . 0.79 62.86 18 4.9 No 40 0.45 No 0 0 No -22 0.58 No 48 61.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68567489 + NM_133509 RAD51B 0 . . . 2.72 72.61 23 5.38 No 73 -3.37 No 0 0 No -19 0.38 No 44 84.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29108495 - NM_001005735 CHEK2 0 . . . 6 77 12 5.18 No 25 0.88 Yes 0 0 No -26 0.48 No 49 85.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68993176 + NM_133509 RAD51B 0 . . . 2.88 80.75 15 4.58 No 45 0.76 No 0 0 No -57 0.9 Yes 41 64.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89633168 + NM_000314 PTEN 0 . . . 2.77 0 23 4.26 No 60 1.47 Yes 0 0 No -25 0.62 No 48 76.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68461646 + NM_133509 RAD51B 0 . . . 1.93 70.44 22 4.44 No 41 -4.18 No 0 0 No -21 0.82 Yes 36 27.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108105994 + NM_000051 ATM 0 . . . 3.11 76.63 30 6.78 Yes 74 -4.72 No 0 0 No -29 0.81 Yes 48 87.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105207129 + NM_021930 RINT1 0 . . . 1.21 74.15 23 5.1 No 66 -3.67 No 0 0 No -22 0.8 Yes 40 35.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68672890 + NM_133509 RAD51B 0 . . . 5.04 74.74 23 5.82 Yes 6 1.63 Yes 0 0 No -22 0.89 Yes 40 39.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68505177 + NM_133509 RAD51B 0 . . . 0.48 0 50 5.34 No 53 0.87 Yes 0 0 No -25 0.9 Yes 29 77.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215601670 - NM_000465 BARD1 0 . . . 7.62 78.12 20 4.8 No 0 0.41 No 0 0 No -55 0.56 No 52 50.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105177995 + NM_021930 RINT1 0 . . . 4.79 67.31 29 4.44 No 43 1 Yes 0 0 No -28 0.57 No 40 74.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6039041 - NM_000535 PMS2 0 . . . 2.36 84.34 22 5.43 No 48 0.69 No 0 0 No -21 0.78 Yes 50 64.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32894913 + NM_000059 BRCA2 0 . . . 0.15 69.22 18 4.69 No -1 0.3 No 0 0 No -17 0.72 Yes 55 64.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47706050 + NM_000251 MSH2 0 . . . 3.31 85.02 16 5.1 No 4 1.2 Yes 0 0 No -19 0.78 Yes 54 56.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41258523 - NM_007294 BRCA1 0 . . . 3.13 76.48 22 5.65 Yes 3 1.1 Yes 0 0 No -21 0.55 No 38 74.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47681811 + NM_000251 MSH2 0 . . . 3.93 82.37 34 7.52 Yes 4 1.3 Yes 0 0 No -33 0.7 Yes 39 62.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48009157 + NM_000179 MSH6 0 . . . 5.44 67.16 21 5.94 Yes 75 -1.5 No 0 0 No -20 0.79 Yes 29 59.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59843821 - NM_032043 BRIP1 0 . . . 1.35 69.66 27 3.72 No 18 0.71 No 0 0 No -22 0.56 No 48 69.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47755755 + NM_000251 MSH2 0 . . . 6.35 79.51 31 5.47 No 23 0.76 No 0 0 No -30 0.46 No 35 79.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68833340 + NM_004360 CDH1 0 . . . 5.36 81.8 20 5 No 36 0.98 Yes 0 0 No -22 0.91 Yes 45 59.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69033334 + NM_133509 RAD51B 0 . . . 4.79 75.83 25 6.41 Yes 21 1.52 Yes 0 0 No -24 0.64 No 37 66.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68295428 + NM_133509 RAD51B 0 . . . 1.25 64.32 16 5.62 Yes 58 0.71 No 0 0 No -30 0.56 No 51 47.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68927935 + NM_133509 RAD51B 0 . . . 1.99 0 18 5.87 Yes 10 0.92 Yes 0 0 No -26 0.46 No 48 85.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37072858 + NM_000249 MLH1 0 . . . 7.64 86.05 51 8.92 Yes 72 0.87 Yes 0 0 No -28 0.45 No 48 84.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108198435 + NM_000051 ATM 0 . . . 0.09 71.33 34 7.63 Yes 58 -4.35 No 0 0 No -33 0.72 Yes 45 23.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69059152 + NM_133509 RAD51B 0 . . . 6.66 90.83 24 7.28 Yes 29 0.98 Yes 0 0 No -27 0.56 No 29 80.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56813182 + NM_058216 RAD51C 0 . . . 1.75 86.33 21 5 No 33 1.43 Yes 0 0 No -20 0.61 No 25 60.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68936475 + NM_133509 RAD51B 0 . . . 0.66 71.36 29 5.82 Yes 54 0.68 No 0 0 No -28 0.43 No 49 62.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131893529 + NM_005732 RAD50 0 . . . 1.23 70.47 28 5.47 No 61 1.35 Yes 0 0 No -21 0.7 Yes 49 53.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68360178 + NM_133509 RAD51B 0 . . . 6.7 77.54 28 5.19 No 6 0.76 No 0 0 No -27 0.86 Yes 39 45.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59881881 - NM_032043 BRIP1 0 . . . 2.42 77.71 9 3.87 No 37 -2.66 No 0 0 No -42 0.64 No 50 76.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68345337 + NM_133509 RAD51B 0 . . . 5.33 78.6 31 5.17 No 4 0.46 No 0 0 No -30 0.43 No 46 66.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68782980 + NM_133509 RAD51B 0 . . . 3.15 74.38 28 4.52 No 41 0.42 No 0 0 No -21 0.69 Yes 49 65.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90986083 - NM_002485 NBN 0 . . . 4.81 81.85 22 5.29 No 3 0.27 No 0 0 No -53 0.51 No 49 50.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68679117 + NM_133509 RAD51B 0 . . . 1.26 71.85 33 5.02 No 47 1.58 Yes 0 0 No -32 0.85 Yes 37 27.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56777885 + NM_058216 RAD51C 0 . . . 0.17 58.77 25 5.16 No 39 0.81 Yes 0 0 No -24 0.86 Yes 43 38.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69106081 + NM_133509 RAD51B 0 . . . 4.57 86.91 45 8.33 Yes 60 0.48 No 0 0 No -44 0.7 Yes 41 58.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47684579 + NM_000251 MSH2 0 . . . 2.02 68.04 21 5.83 Yes 41 0.59 No 0 0 No -23 0.55 No 48 68.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68413923 + NM_133509 RAD51B 0 . . . 3.11 73.04 21 5.18 No 60 1.21 Yes 0 0 No -25 0.61 No 29 80.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131967400 + NM_005732 RAD50 0 . . . 4.6 68.09 22 4.8 No 70 0.34 No 0 0 No -21 0.72 Yes 43 85.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47678156 + NM_000251 MSH2 0 . . . 1.18 68.72 19 4.09 No -1 0.75 No 0 0 No -19 0.31 No 59 47.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69121483 + NM_133509 RAD51B 0 . . . 1.29 64.74 25 5.39 No 69 0.73 No 0 0 No -22 0.8 Yes 40 85.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215623862 - NM_000465 BARD1 0 . . . 2 70.79 22 5.29 No 32 0.8 Yes 0 0 No -21 0.47 No 48 92.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23624852 - NM_024675 PALB2 0 . . . 0.59 0 16 4.9 No 45 0.99 Yes 0 0 No -19 0.53 No 43 44.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900755 + NM_133509 RAD51B 0 . . . 6.36 77.17 22 5.28 No 53 0.14 No 0 0 No -46 0.59 No 43 77.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69111086 + NM_133509 RAD51B 0 . . . 2.61 78.05 47 5.34 No 28 1.35 Yes 0 0 No -28 0.73 Yes 41 55.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47731306 + NM_000251 MSH2 0 . . . 7.05 91.72 28 5.83 Yes 37 1.5 Yes 0 0 No -27 0.71 Yes 54 51.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56785606 + NM_058216 RAD51C 0 . . . 7.55 74.62 33 4.39 No 25 1.23 Yes 0 0 No -32 0.54 No 33 54.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68707384 + NM_133509 RAD51B 0 . . . 4.76 79.22 22 6.93 Yes 48 2.04 Yes 0 0 No -21 0.59 No 20 44.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68641442 + NM_133509 RAD51B 0 . . . 4.43 75.63 19 6.54 Yes 8 2.12 Yes 0 0 No -18 0.62 No 50 76.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108202702 + NM_000051 ATM 0 . . . 3.45 71.41 28 5.54 No -2 0.65 No 0 0 No -27 0.77 Yes 60 23.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68510947 + NM_133509 RAD51B 0 . . . 5.77 72.55 23 7.81 Yes 65 -4.52 No 0 0 No -22 0.75 Yes 45 63.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68617066 + NM_133509 RAD51B 0 . . . 1.45 68.11 18 4.8 No 11 -1.77 No 0 0 No -18 0.49 No 47 60.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1214953 + NM_000455 STK11 0 . . . 5.8 71.16 19 4.52 No 76 0.33 No 0 0 No -19 0.57 No 41 72.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59858441 - NM_032043 BRIP1 0 . . . 1.99 73.52 23 4.42 No 62 -2.17 No 0 0 No -25 0.6 No 48 77.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108204116 + NM_000051 ATM 0 . . . 5.59 68.71 47 6.97 Yes 71 0.78 Yes 0 0 No -47 0.58 No 47 59.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94227772 - NM_005591 MRE11 0 . . . 6.39 83.97 36 6.78 Yes 0 1.13 Yes 0 0 No -35 0.58 No 43 73.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33440012 - NM_002878 RAD51D 0 . . . 1.77 0 22 5.71 Yes 66 1.69 Yes 0 0 No -26 0.85 Yes 52 79.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190730732 + NM_000534 PMS1 0 . . . 3.34 79.88 26 5 No 8 0.65 No 0 0 No -25 0.91 Yes 50 56.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69128016 + NM_133509 RAD51B 0 . . . 7.62 87.03 32 5.74 Yes 48 -1.8 No 0 0 No -28 0.52 No 48 51.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59934394 - NM_032043 BRIP1 0 . . . 4.82 75.22 39 6.7 Yes 10 0.57 No 0 0 No -38 0.76 Yes 42 59.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41219834 - NM_007294 BRCA1 0 . . . 0.8 0 26 5.81 Yes 62 0.05 No 0 0 No -25 0.94 Yes 53 40.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68940889 + NM_133509 RAD51B 0 . . . 8.12 83.69 15 3.72 No 21 0.99 Yes 0 0 No -21 0.9 Yes 37 71.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68431686 + NM_133509 RAD51B 0 . . . 0.53 62.43 19 5 No 40 0.93 Yes 0 0 No -18 0.37 No 45 66.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89657077 + NM_000314 PTEN 0 . . . 5.27 83.52 26 4.91 No 28 1.56 Yes 0 0 No -20 0.47 No 40 54.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190650747 + NM_000534 PMS1 0 . . . 1.41 0 17 7 Yes 63 0.65 No 0 0 No -26 0.55 No 53 71.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6033545 - NM_000535 PMS2 0 . . . 1.54 0 26 5.2 No 25 0.85 Yes 0 0 No -25 0.91 Yes 44 53.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68953963 + NM_133509 RAD51B 0 . . . 13.09 92.7 15 5.54 No 70 -2.06 No 0 0 No -28 0.83 Yes 47 43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108112983 + NM_000051 ATM 0 . . . 1.43 67.1 31 5.57 Yes 72 -5.47 No 0 0 No -30 0.77 Yes 41 35.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68314633 + NM_133509 RAD51B 0 . . . 2.98 67.3 24 3.64 No 53 0.76 No 0 0 No -23 0.91 Yes 37 59.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68823090 + NM_004360 CDH1 0 . . . 0.77 68.84 32 5.74 Yes 66 1.44 Yes 0 0 No -28 0.39 No 48 57.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68508313 + NM_133509 RAD51B 0 . . . 8.36 88.91 38 6.83 Yes 42 0.98 Yes 0 0 No -37 0.55 No 29 83.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68955370 + NM_133509 RAD51B 0 . . . 6.66 80.46 34 6.62 Yes 75 1.11 Yes 0 0 No -24 0.64 No 50 75.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131908422 + NM_005732 RAD50 0 . . . 1.99 74.37 28 7.28 Yes 22 0.49 No 0 0 No -27 0.9 Yes 25 56.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59812957 - NM_032043 BRIP1 0 . . . 2.96 82.27 33 6.24 Yes 45 0.9 Yes 0 0 No -35 0.7 Yes 13 70.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59777020 - NM_032043 BRIP1 0 . . . 0.02 0 38 5.03 No 41 0.72 No 0 0 No -20 0.43 No 55 46.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190734843 + NM_000534 PMS1 0 . . . 6.93 78.53 32 6 Yes 34 1 Yes 0 0 No -31 0.77 Yes 41 78.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94188085 - NM_005591 MRE11 0 . . . 1.4 65.98 25 4.88 No 36 0.95 Yes 0 0 No -24 0.84 Yes 22 71.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68975488 + NM_133509 RAD51B 0 . . . 8.58 79.86 14 5.2 No 28 0.68 No 0 0 No -24 0.41 No 40 86.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68561473 + NM_133509 RAD51B 0 . . . 2.33 76.82 18 5.53 No 55 0.15 No 0 0 No -28 0.9 Yes 48 41.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68393245 + NM_133509 RAD51B 0 . . . 0.33 0 30 7.51 Yes 54 0.64 No 0 0 No -29 0.61 No 37 71.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29092039 - NM_001005735 CHEK2 0 . . . 0.73 71.84 15 4.58 No 73 0.48 No 0 0 No -22 0.54 No 53 86.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89726015 + NM_000314 PTEN 0 . . . 4.04 65.35 14 5.46 No -3 0.03 No 0 0 No -25 0.9 Yes 45 29.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90966845 - NM_002485 NBN 0 . . . 10.59 94.24 32 6 Yes 21 2.03 Yes 0 0 No -31 0.46 No 37 86.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69035129 + NM_133509 RAD51B 0 . . . 1.06 59.96 24 6.08 Yes 1 0.22 No 0 0 No -23 0.88 Yes 44 82.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105200631 + NM_021930 RINT1 0 . . . 3.2 65.38 18 4.12 No 14 0.83 Yes 0 0 No -32 0.66 No 44 96.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89676539 + NM_000314 PTEN 0 . . . 9.31 83.32 13 4.69 No 14 2.25 Yes 0 0 No -24 0.74 Yes 44 80.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108108012 + NM_000051 ATM 0 . . . 1.93 71.96 76 7.89 Yes 68 0.35 No 0 0 No -31 0.76 Yes 50 44.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47729545 + NM_000251 MSH2 0 . . . 1.27 57.04 57 8.11 Yes 39 -3.61 No 0 0 No -56 0.39 No 57 19.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215600868 - NM_000465 BARD1 0 . . . 1.06 82.11 22 5.1 No 27 0.46 No 0 0 No -21 0.81 Yes 48 42.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48019248 + NM_000179 MSH6 0 . . . 3.54 67.22 22 7.14 Yes 23 1.79 Yes 0 0 No -21 0.87 Yes 45 60.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215648779 - NM_000465 BARD1 0 . . . 1.9 71.73 22 5.34 No 15 1.13 Yes 0 0 No -28 0.36 No 43 88.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68512459 + NM_133509 RAD51B 0 . . . 4.07 75.28 20 5.57 Yes 13 0.43 No 0 0 No -19 0.79 Yes 45 90.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41254354 - NM_007294 BRCA1 0 . . . 0.97 74.68 31 6.55 Yes 27 -0.82 No 0 0 No -30 0.88 Yes 54 53.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90992019 - NM_002485 NBN 0 . . . 0.78 75.35 12 4.9 No 41 0.02 No 0 0 No -21 0.59 No 50 53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108232065 + NM_000051 ATM 0 . . . 3.35 68.29 30 5.52 No -4 0.49 No 0 0 No -29 0.85 Yes 49 24.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68496952 + NM_133509 RAD51B 0 . . . 5.22 79.98 30 7.35 Yes 4 0.09 No 0 0 No -29 0.92 Yes 45 54.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68851748 + NM_133509 RAD51B 0 . . . 0.56 73 21 5.2 No 60 -4.44 No 0 0 No -39 0.76 Yes 53 28.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89656927 + NM_000314 PTEN 0 . . . 1.08 84.22 28 4.95 No 33 0.99 Yes 0 0 No -27 0.61 No 25 53.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131958298 + NM_005732 RAD50 0 . . . 7.88 80.95 32 6.86 Yes 6 0.76 No 0 0 No -31 0.97 Yes 49 91.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90975808 - NM_002485 NBN 0 . . . 2.71 68.3 17 6.93 Yes 26 0.98 Yes 0 0 No -29 0.4 No 49 70.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68967125 + NM_133509 RAD51B 0 . . . 2.14 78.94 21 5.04 No 69 -4.98 No 0 0 No -20 0.65 No 51 51.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190719484 + NM_000534 PMS1 0 . . . 7.94 75.12 27 3.79 No 74 -6.05 No 0 0 No -50 0.62 No 46 67.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68378653 + NM_133509 RAD51B 0 . . . 3.42 75.59 12 4 No 22 0.37 No 0 0 No -34 0.83 Yes 52 62.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108144749 + NM_000051 ATM 0 . . . 4.46 85.97 44 9.36 Yes 23 0.64 No 0 0 No -43 0.52 No 35 80.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68879337 + NM_133509 RAD51B 0 . . . 3.56 69.28 19 5.38 No 70 0.58 No 0 0 No -26 0.61 No 52 64.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68469660 + NM_133509 RAD51B 0 . . . 5.38 68.87 33 7.49 Yes 8 0.33 No 0 0 No -32 0.57 No 50 77.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215614669 - NM_000465 BARD1 0 . . . 9.23 81.48 23 4.82 No 49 0.69 No 0 0 No -22 0.74 Yes 38 73.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94226466 - NM_005591 MRE11 0 . . . 2.46 67.11 16 5.43 No 54 0.31 No 0 0 No -28 0.69 Yes 45 80.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108219629 + NM_000051 ATM 0 . . . 0.81 65.14 21 4.47 No 47 -4.91 No 0 0 No -20 0.82 Yes 44 31.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131897148 + NM_005732 RAD50 0 . . . 0.42 0 9 5.2 No 23 1.12 Yes 0 0 No -26 0.65 No 35 51.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90954353 - NM_002485 NBN 0 . . . 10.92 83.71 35 6.93 Yes 14 0.53 No 0 0 No -34 0.52 No 43 80.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68506236 + NM_133509 RAD51B 0 . . . 0.34 0 19 6.64 Yes 53 -3.57 No 0 0 No -24 0.81 Yes 48 68.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108172667 + NM_000051 ATM 0 . . . 5 84.77 19 6.16 Yes 37 1.66 Yes 0 0 No -18 0.53 No 44 76.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69040576 + NM_133509 RAD51B 0 . . . 3.92 76.86 19 6.07 Yes 8 -0.97 No 0 0 No -32 0.44 No 50 68.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68660773 + NM_133509 RAD51B 0 . . . 3.96 73.37 18 4.9 No 11 0.52 No 0 0 No -26 0.65 No 49 55.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68311457 + NM_133509 RAD51B 0 . . . 5.8 75.36 17 5.62 Yes 6 1.55 Yes 0 0 No -26 0.69 Yes 44 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37045615 + NM_000249 MLH1 0 . . . 2.33 62.12 34 6.11 Yes 70 0.87 Yes 0 0 No -23 0.76 Yes 41 88.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68815452 + NM_004360 CDH1 0 . . . 3.08 79.24 27 5.2 No 31 1.3 Yes 0 0 No -26 0.79 Yes 27 70.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68349723 + NM_133509 RAD51B 0 . . . 8.22 89.25 17 5.03 No 21 1.58 Yes 0 0 No -44 0.35 No 47 74.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59902092 - NM_032043 BRIP1 0 . . . 0.95 77.79 20 5.1 No 28 0.32 No 0 0 No -19 0.75 Yes 46 65.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59846018 - NM_032043 BRIP1 0 . . . 6.03 94.29 20 4.34 No 3 0.37 No 0 0 No -24 0.35 No 42 82.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94214117 - NM_005591 MRE11 0 . . . 6.39 85.37 53 7.15 Yes 62 1.23 Yes 0 0 No -24 0.75 Yes 46 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59913301 - NM_032043 BRIP1 0 . . . 3.92 68.65 24 5.01 No 76 1.99 Yes 0 0 No -23 0.82 Yes 47 50.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84398799 - NM_139076 FAM175A 0 . . . 0.5 62.57 15 5.2 No 55 0.41 No 0 0 No -48 0.52 No 42 26.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90993890 - NM_002485 NBN 0 . . . 6.2 83.45 12 5.61 Yes 2 0.92 Yes 24 0.67 Yes -26 0.77 Yes 47 63.53 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68380530 + NM_133509 RAD51B 0 . . . 3.61 76.49 24 4.87 No 36 0.59 No 0 0 No -23 0.73 Yes 47 64.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68844735 + NM_133509 RAD51B 0 . . . 4.93 68.68 22 5.84 Yes 2 0.02 No 0 0 No -21 0.88 Yes 42 79.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29115578 - NM_001005735 CHEK2 0 . . . 0.21 65.81 32 4.81 No 17 1.11 Yes 0 0 No -31 0.3 No 41 48.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190716035 + NM_000534 PMS1 0 . . . 8.92 93.94 24 5.83 Yes 31 0.4 No 0 0 No -23 0.76 Yes 42 79.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23645735 - NM_024675 PALB2 0 . . . 3.69 80.65 46 6.57 Yes 27 0.94 Yes 0 0 No -36 0.48 No 50 63.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90954289 - NM_002485 NBN 0 . . . 3.85 71.81 15 5.57 Yes 5 0.29 No 0 0 No -24 0.65 No 31 71.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23636270 - NM_024675 PALB2 0 . . . 4.07 75.63 58 7.24 Yes 16 1.58 Yes 0 0 No -32 0.61 No 42 89.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37042228 + NM_000249 MLH1 0 . . . 0.18 78.76 9 3.87 No 12 0.42 No 0 0 No -27 0.88 Yes 46 75.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89680451 + NM_000314 PTEN 0 . . . 3.19 67.29 31 5.97 Yes 54 0.55 No 0 0 No -31 0.79 Yes 43 54.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69004868 + NM_133509 RAD51B 0 . . . 5.54 83.03 24 6.31 Yes 50 2.07 Yes 0 0 No -30 0.73 Yes 45 57.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68684613 + NM_133509 RAD51B 0 . . . 2.88 79.59 40 4.64 No 42 -2.31 No 0 0 No -14 0.31 No 49 69.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68675180 + NM_133509 RAD51B 0 . . . 2.36 0 30 6.4 Yes 5 0.97 Yes 0 0 No -29 0.65 No 42 41.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68469376 + NM_133509 RAD51B 0 . . . 0.74 0 29 5.91 Yes 30 0.42 No 0 0 No -28 0.74 Yes 40 75.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68773795 + NM_133509 RAD51B 0 . . . 1.15 0 12 3.86 No 60 0.94 Yes 0 0 No -33 0.42 No 42 69.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215623683 - NM_000465 BARD1 0 . . . 7.55 65.6 16 5.2 No 38 0.07 No 0 0 No -20 0.42 No 36 85.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21983353 - NM_000077 CDKN2A 0 . . . 0.37 66.6 15 5.75 Yes 32 -4.21 No 0 0 No -29 0.32 No 37 90.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89697846 + NM_000314 PTEN 0 . . . 2.97 68.99 14 3.78 No 35 0.64 No 0 0 No -26 0.78 Yes 49 50.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68634455 + NM_133509 RAD51B 0 . . . 3.84 67.64 15 5.61 Yes 8 1.14 Yes 0 0 No -29 0.64 No 50 70.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68844149 + NM_133509 RAD51B 0 . . . 4.8 71.34 30 4.44 No 66 1.68 Yes 0 0 No -23 0.85 Yes 39 59.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59854989 - NM_032043 BRIP1 0 . . . 2.45 71.01 22 6.16 Yes 50 1.29 Yes 0 0 No -21 0.91 Yes 33 81.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68841855 + NM_004360 CDH1 0 . . . 1.89 66.11 20 6.08 Yes 55 0.53 No 0 0 No -30 0.58 No 46 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69058827 + NM_133509 RAD51B 0 . . . 1.19 0 34 5.83 Yes 64 1.16 Yes 0 0 No -28 0.82 Yes 47 61.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68819091 + NM_004360 CDH1 0 . . . 0.51 0 28 5.04 No 57 0.55 No 0 0 No -58 0.54 No 33 26.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69057766 + NM_133509 RAD51B 0 . . . 4.71 66.56 19 4.47 No 15 0.57 No 0 0 No -37 0.6 No 43 72.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37075513 + NM_000249 MLH1 0 . . . 5.32 73.87 28 5.38 No 72 0.59 No 0 0 No -27 0.59 No 40 67.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68896880 + NM_133509 RAD51B 0 . . . 2.13 72.21 30 6 Yes 73 0.64 No 0 0 No -29 0.81 Yes 50 74.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68931902 + NM_133509 RAD51B 0 . . . 7.73 72.73 26 5.11 No 33 1.06 Yes 0 0 No -25 0.93 Yes 46 52.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47775585 + NM_000251 MSH2 0 . . . 4.75 82.92 19 6.24 Yes 28 0.99 Yes 0 0 No -36 0.73 Yes 43 68.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68908924 + NM_133509 RAD51B 0 . . . 1.81 0 16 5.95 Yes 17 1.39 Yes 0 0 No -22 0.45 No 40 77.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68851932 + NM_133509 RAD51B 0 . . . 3.56 78.25 32 6 Yes 35 1.15 Yes 0 0 No -31 0.57 No 51 86.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68755917 + NM_133509 RAD51B 0 . . . 5.11 81.48 22 4.9 No 19 1.05 Yes 0 0 No -21 0.85 Yes 39 83.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41239250 - NM_007294 BRCA1 0 . . . 3.43 67.69 21 5.72 Yes 55 1.1 Yes 0 0 No -20 0.34 No 51 70.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68842339 + NM_133509 RAD51B 0 . . . 6.32 79.13 28 5.82 Yes 21 1.49 Yes 0 0 No -27 0.67 Yes 37 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68573198 + NM_133509 RAD51B 0 . . . 3.9 70.3 15 5.29 No 22 0.63 No 0 0 No -21 0.58 No 36 68.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69081425 + NM_133509 RAD51B 0 . . . 7.45 82.4 27 3.6 No 52 0.2 No 0 0 No -26 0.65 No 41 79.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68307334 + NM_133509 RAD51B 0 . . . 5.15 82.69 51 7.9 Yes 55 0.8 Yes 0 0 No -29 0.87 Yes 45 58.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84398996 - NM_139076 FAM175A 0 . . . 7.03 78.17 24 5.28 No 45 1.87 Yes 0 0 No -53 0.4 No 40 73.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94199101 - NM_005591 MRE11 0 . . . 2.7 0 19 4.8 No 3 1.21 Yes 0 0 No -37 0.62 No 20 46.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131951987 + NM_005732 RAD50 0 . . . 2.02 73.3 27 5.08 No 59 0.63 No 0 0 No -26 0.62 No 44 78.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215635933 - NM_000465 BARD1 0 . . . 1.07 72 14 4.52 No 40 1.1 Yes 0 0 No -23 0.59 No 30 92.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59941895 - NM_032043 BRIP1 0 . . . 3.98 85.02 13 4.15 No 33 1.12 Yes 0 0 No -23 0.74 Yes 56 30.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68654576 + NM_133509 RAD51B 0 . . . 4.71 84.17 23 5.12 No 66 0.47 No 0 0 No -23 0.75 Yes 13 56.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59839656 - NM_032043 BRIP1 0 . . . 9.83 83.42 21 4.8 No 29 0.73 No 0 0 No -20 0.82 Yes 43 70.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215639184 - NM_000465 BARD1 0 . . . 0.6 71.09 18 5.29 No 66 0.37 No 0 0 No -29 0.56 No 30 33.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68974778 + NM_133509 RAD51B 0 . . . 2.07 71.89 15 6.16 Yes NA NA NA 0 0 No -26 0.54 No 39 62.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131941303 + NM_005732 RAD50 0 . . . 5.25 79.16 31 5.71 Yes 21 0.13 No 0 0 No -30 0.49 No 46 70.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68802726 + NM_133509 RAD51B 0 . . . 8.34 84.55 22 5.1 No 74 -3.77 No 0 0 No -21 0.6 No 38 77.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68488970 + NM_133509 RAD51B 0 . . . 4.21 73.07 39 7.88 Yes 35 0.69 No 0 0 No -38 0.69 Yes 46 74.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68990576 + NM_133509 RAD51B 0 . . . 3.13 77.66 55 5.85 Yes 46 -3.83 No 0 0 No -23 0.21 No 52 60.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29104840 - NM_001005735 CHEK2 0 . . . 5.47 85.37 24 4.72 No 8 1.14 Yes 0 0 No -24 0.89 Yes 50 93.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152363834 - NM_005431 XRCC2 0 . . . 1.88 77.35 17 6.08 Yes 65 1.1 Yes 0 0 No -16 0.7 Yes 52 63.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23637295 - NM_024675 PALB2 0 . . . 2.69 0 12 5.49 No 41 1.47 Yes 0 0 No -24 0.67 Yes 41 83.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69147134 + NM_133509 RAD51B 0 . . . 0.77 61.53 27 5.2 No 42 -3.15 No 0 0 No -26 0.79 Yes 48 45.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21991455 - NM_000077 CDKN2A 0 . . . 5.8 69.4 14 5.1 No 16 1.13 Yes 0 0 No -28 0.75 Yes 42 94.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32952856 + NM_000059 BRCA2 0 . . . 0.19 59.49 24 4.71 No 51 1.18 Yes 0 0 No -26 0.5 No 33 71.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108142497 + NM_000051 ATM 0 . . . 2.4 70.46 15 5.29 No 47 0.54 No 0 0 No -35 0.29 No 35 89.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68802356 + NM_133509 RAD51B 0 . . . 2.07 0 30 5.74 Yes 10 0.05 No 0 0 No -22 0.25 No 40 51.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68826668 + NM_004360 CDH1 0 . . . 8.53 87.67 21 4.2 No 18 1.16 Yes 0 0 No -20 0.69 Yes 40 88.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68399268 + NM_133509 RAD51B 0 . . . 2.96 72.59 34 6.92 Yes 18 0.03 No 0 0 No -33 0.9 Yes 40 44.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23643572 - NM_024675 PALB2 0 . . . 1.75 81.47 22 5.29 No 33 0.73 No 0 0 No -32 0.38 No 42 57.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69083591 + NM_133509 RAD51B 0 . . . 0.05 0 32 5.74 Yes 69 0.25 No 0 0 No -28 0.42 No 41 73.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68461373 + NM_133509 RAD51B 0 . . . 0.25 69.29 32 6.92 Yes 40 -4.34 No 0 0 No -28 0.45 No 41 84.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32975678 + NM_000059 BRCA2 0 . . . 4.12 80.73 32 5.74 Yes -2 0.33 No 0 0 No -31 0.28 No 44 40.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510407 - NM_001040108 MLH3 0 . . . 4.58 85.44 21 4.94 No 17 0.96 Yes 0 0 No -20 0.73 Yes 41 83.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69006226 + NM_133509 RAD51B 0 . . . 0.37 0 22 4.72 No 21 0.02 No 0 0 No -25 0.72 Yes 21 74.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75501236 - NM_001040108 MLH3 0 . . . 0.28 74.11 19 5.66 Yes 45 -3.61 No 0 0 No -18 0.68 Yes 46 46.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108146753 + NM_000051 ATM 0 . . . 3.63 81.02 14 5.39 No 69 0.64 No 0 0 No -28 0.38 No 45 39.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59813061 - NM_032043 BRIP1 0 . . . 1.97 80.65 30 6.85 Yes 76 1.46 Yes 0 0 No -29 0.68 Yes 50 89.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68640063 + NM_133509 RAD51B 0 . . . 3.28 78.69 30 4.76 No 67 0.77 Yes 0 0 No -29 0.6 No 48 54.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69102241 + NM_133509 RAD51B 0 . . . 3.74 71.16 10 4 No 33 -1.88 No 0 0 No -29 0.78 Yes 48 30.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68595565 + NM_133509 RAD51B 0 . . . 1.93 77.57 20 6.52 Yes 48 -3.31 No 0 0 No -27 0.64 No 43 54.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131916213 + NM_005732 RAD50 0 . . . 5.86 75.19 17 4.8 No 74 -4.25 No 0 0 No -56 0.18 No 41 53.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68861525 + NM_004360 CDH1 0 . . . 9.65 70.92 25 5.2 No 59 0.53 No 0 0 No -24 0.95 Yes 45 64.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89678909 + NM_000314 PTEN 0 . . . 2.35 78.52 22 5.1 No 3 0.89 Yes 0 0 No -21 0.93 Yes 51 88.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75507008 - NM_001040108 MLH3 0 . . . 1.64 68.26 16 4.79 No 52 0.91 Yes 0 0 No -20 0.83 Yes 47 69.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94152197 - NM_005591 MRE11 0 . . . 3.23 80.36 15 4.58 No 20 1.07 Yes 0 0 No -29 0.3 No 38 83.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89689806 + NM_000314 PTEN 0 . . . 5.89 91.08 21 5.9 Yes 52 0.34 No 0 0 No -25 0.52 No 42 57.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37039679 + NM_000249 MLH1 0 . . . 4.51 76.61 50 6.47 Yes 11 0.04 No 0 0 No -31 0.67 Yes 43 32.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68379874 + NM_133509 RAD51B 0 . . . 0.88 69.88 44 6.72 Yes 54 1.53 Yes 0 0 No -24 0.74 Yes 25 83.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68495433 + NM_133509 RAD51B 0 . . . 5.99 80.43 18 4.8 No 48 -2.73 No 0 0 No -24 0.82 Yes 49 88.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68374483 + NM_133509 RAD51B 0 . . . 4.73 73.63 20 4.67 No 63 0.09 No 0 0 No -23 0.83 Yes 48 60.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68954344 + NM_133509 RAD51B 0 . . . 0.78 84.22 23 5.2 No 76 1.48 Yes 0 0 No -22 0.46 No 50 36.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89723423 + NM_000314 PTEN 0 . . . 5.39 79.55 15 5 No 33 0.7 No 0 0 No -23 0.38 No 38 80.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68354674 + NM_133509 RAD51B 0 . . . 5.89 77.92 32 6.93 Yes 71 0.63 No 0 0 No -31 0.54 No 49 57.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190692913 + NM_000534 PMS1 0 . . . 2.95 70.85 31 6.89 Yes 21 1.71 Yes 0 0 No -30 0.48 No 37 82.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131895781 + NM_005732 RAD50 0 . . . 1.6 64.78 30 5.68 Yes 36 -2.91 No 0 0 No -29 0.6 No 46 34.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23626785 - NM_024675 PALB2 0 . . . 1.53 67.92 17 5.39 No 25 0.41 No 0 0 No -30 0.64 No 48 50.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40995344 + NM_001164269 RAD51 0 . . . 3.68 77.47 58 9.21 Yes 50 0.7 No 0 0 No -28 0.53 No 48 61.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183373 - NM_005591 MRE11 0 . . . 3.77 76.84 39 5.63 Yes 1 1.31 Yes 0 0 No -38 0.78 Yes 50 41.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41216804 - NM_007294 BRCA1 0 . . . 0.96 70.97 28 5.48 No 14 0.41 No 0 0 No -23 0.68 Yes 53 26.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56775753 + NM_058216 RAD51C 0 . . . 1.55 73.39 40 7.04 Yes 32 1.11 Yes 0 0 No -39 0.74 Yes 26 85.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41221569 - NM_007294 BRCA1 0 . . . 4.55 75.83 23 5.64 Yes 35 1.28 Yes 0 0 No -26 0.61 No 49 55.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68668988 + NM_133509 RAD51B 0 . . . 2.33 70.44 23 5.2 No 60 1 Yes 0 0 No -22 0.77 Yes 48 79.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68703293 + NM_133509 RAD51B 0 . . . 3.01 76.79 30 5.43 No 71 -3.05 No 0 0 No -29 0.75 Yes 46 73.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215662780 - NM_000465 BARD1 0 . . . 3.85 69.2 27 5.33 No 46 -4.75 No 0 0 No -26 0.43 No 44 46.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68842123 + NM_004360 CDH1 0 . . . 1.83 76.51 25 5.89 Yes 73 0.83 Yes 0 0 No -22 0.73 Yes 40 23.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68952477 + NM_133509 RAD51B 0 . . . 1.7 66.55 23 5.11 No 74 1.88 Yes 0 0 No -26 0.67 Yes 42 38.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41271656 - NM_007294 BRCA1 0 . . . 1.78 76.5 23 5.92 Yes 48 0.95 Yes 0 0 No -22 0.92 Yes 32 42.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94224681 - NM_005591 MRE11 0 . . . 1.12 70.34 21 4.9 No 16 0.49 No 0 0 No -20 0.92 Yes 39 61.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48015438 + NM_000179 MSH6 0 . . . 3.53 81.14 20 5.87 Yes 73 2.05 Yes 0 0 No -19 0.73 Yes 11 15.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94161859 - NM_005591 MRE11 0 . . . 0.68 0 19 5 No 10 0.92 Yes 0 0 No -22 0.51 No 48 83.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48025523 + NM_000179 MSH6 0 . . . 0.57 0 17 5.65 Yes 9 0.55 No 0 0 No -16 0.34 No 49 61.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68550973 + NM_133509 RAD51B 0 . . . 8.6 89.05 19 5 No 32 1.32 Yes 0 0 No -18 0.72 Yes 46 47.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41211620 - NM_007294 BRCA1 0 . . . 0.16 62.65 20 5.1 No 76 -3.78 No 0 0 No -46 0.89 Yes 57 33.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215632799 - NM_000465 BARD1 0 . . . 1.11 72.3 18 4.8 No 43 -3.31 No 0 0 No -47 0.52 No 60 66.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7565209 - NM_000546 TP53 0 . . . 0.75 74.68 17 4.9 No 37 -1.2 No 0 0 No -17 0.37 No 43 47.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68984603 + NM_133509 RAD51B 0 . . . 3.21 70.44 17 5.57 Yes -2 0.25 No 0 0 No -16 0.47 No 49 77.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32904524 + NM_000059 BRCA2 0 . . . 5.51 78.09 19 4.69 No 71 0.7 No 0 0 No -17 0.34 No 44 67.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68637870 + NM_133509 RAD51B 0 . . . 5.66 84.33 26 5.48 No 31 0.82 Yes 0 0 No -25 0.9 Yes 43 97.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89652777 + NM_000314 PTEN 0 . . . 0.96 70.83 45 7.57 Yes 5 0.05 No 0 0 No -44 0.81 Yes 46 40.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108140421 + NM_000051 ATM 0 . . . 4.32 74.43 22 4.69 No -2 0.32 No 0 0 No -21 0.59 No 43 71.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131952225 + NM_005732 RAD50 0 . . . 0.62 0 41 5.9 Yes 13 0.46 No 0 0 No -35 0.68 Yes 49 79.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59935058 - NM_032043 BRIP1 0 . . . 4.8 76.79 24 6.16 Yes 36 0.45 No 0 0 No -24 0.79 Yes 48 36.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69116271 + NM_133509 RAD51B 0 . . . 4.3 78.11 19 5.16 No 41 0.92 Yes 0 0 No -25 0.51 No 47 80.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68908684 + NM_133509 RAD51B 0 . . . 7.85 87.26 18 5.48 No 46 2.06 Yes 0 0 No -17 0.59 No 40 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41210988 - NM_007294 BRCA1 0 . . . 5.73 77.38 52 8.33 Yes 17 0.11 No 0 0 No -34 0.58 No 43 62.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41231832 - NM_007294 BRCA1 0 . . . 10.51 92.78 17 4.7 No 8 1.41 Yes 0 0 No -27 0.75 Yes 42 54.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29130579 - NM_001005735 CHEK2 0 . . . 2.67 0 22 5.95 Yes 21 0.45 No 0 0 No -25 0.54 No 18 17.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68591518 + NM_133509 RAD51B 0 . . . 0.38 54.4 84 8.53 Yes 16 0.64 No 0 0 No -33 0.64 No 34 32.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59898454 - NM_032043 BRIP1 0 . . . 5.17 76.63 15 4.58 No 46 1.02 Yes 0 0 No -20 0.94 Yes 45 87.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68842376 + NM_133509 RAD51B 0 . . . 9.87 86.13 26 4.63 No 58 1.47 Yes 0 0 No -24 0.22 No 46 64.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41235705 - NM_007294 BRCA1 0 . . . 1.61 0 17 4.58 No 11 1.27 Yes 0 0 No -16 0.86 Yes 50 52.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108141633 + NM_000051 ATM 0 . . . 0.62 74.26 32 7 Yes 33 1.16 Yes 0 0 No -31 0.84 Yes 25 60.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41205234 - NM_007294 BRCA1 0 . . . 6.67 80.95 15 4 No 57 -4.75 No 0 0 No -25 0.8 Yes 51 59.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69020804 + NM_133509 RAD51B 0 . . . 4.38 76.61 30 6.35 Yes 10 0.82 Yes 0 0 No -33 0.44 No 48 69.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89695913 + NM_000314 PTEN 0 . . . 8.21 87.86 18 3.34 No 67 0.52 No 0 0 No -49 0.43 No 48 68.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680207 + NM_000251 MSH2 0 . . . 3.57 85.2 23 7.35 Yes 57 0 No 0 0 No -22 0.91 Yes 49 93.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29118597 - NM_001005735 CHEK2 0 . . . 3.3 64.43 61 8.89 Yes 12 0.61 No 0 0 No -32 0.61 No 46 71.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190736602 + NM_000534 PMS1 0 . . . 1.82 74.49 29 6.78 Yes 50 -3.64 No 0 0 No -28 0.96 Yes 51 68.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89638446 + NM_000314 PTEN 0 . . . 3.09 53.86 20 5.48 No 39 1.3 Yes 0 0 No -23 0.77 Yes 35 69.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37045703 + NM_000249 MLH1 0 . . . 6.26 78.85 39 6.03 Yes 39 1.22 Yes 0 0 No -33 0.24 No 46 58.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68631520 + NM_133509 RAD51B 0 . . . 1.46 67.59 14 4.65 No -1 0.38 No 0 0 No -55 0.61 No 49 32.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23644383 - NM_024675 PALB2 0 . . . 6.78 69.83 39 6.96 Yes 8 0.98 Yes 0 0 No -38 0.83 Yes 12 64.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48029808 + NM_000179 MSH6 0 . . . 4.38 60.07 35 5.91 Yes 42 0.07 No 0 0 No -30 0.62 No 29 79.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41232742 - NM_007294 BRCA1 0 . . . 0.62 71.6 39 6.85 Yes 13 1 Yes 0 0 No -38 0.7 Yes 45 92.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68552465 + NM_133509 RAD51B 0 . . . 0.39 71.46 24 5.2 No 15 0.06 No 0 0 No -23 0.85 Yes 43 69.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108187679 + NM_000051 ATM 0 . . . 3.41 63.71 9 4.47 No 70 -2.11 No 0 0 No -18 0.49 No 43 74.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59830168 - NM_032043 BRIP1 0 . . . 6.67 76.48 24 5.1 No 53 1.06 Yes 0 0 No -23 0.91 Yes 40 70.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131902813 + NM_005732 RAD50 0 . . . 0.28 60.05 14 4.36 No 17 0.25 No 0 0 No -13 0.28 No 60 42.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105186300 + NM_021930 RINT1 0 . . . 0.46 0 22 6.32 Yes 6 1.44 Yes 0 0 No -21 0.57 No 40 40.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131929068 + NM_005732 RAD50 0 . . . 4.07 66.2 25 5.03 No 69 -2.48 No 0 0 No -35 0.61 No 40 65.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68376911 + NM_133509 RAD51B 0 . . . 0.66 61.36 29 4.66 No 75 0.18 No 0 0 No -23 0.64 No 50 50.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215638982 - NM_000465 BARD1 0 . . . 0.37 68.01 19 4.86 No 34 1.13 Yes 0 0 No -37 0.72 Yes 43 45.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215665487 - NM_000465 BARD1 0 . . . 1.72 70.55 42 8.02 Yes 8 1.41 Yes 0 0 No -41 0.96 Yes 39 81.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69035379 + NM_133509 RAD51B 0 . . . 0.43 71.89 28 5.83 Yes 70 -1.29 No 0 0 No -27 0.72 Yes 17 64.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94172435 - NM_005591 MRE11 0 . . . 2.97 0 10 4 No 62 0.91 Yes 0 0 No -30 0.68 Yes 31 66.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68803475 + NM_004360 CDH1 0 . . . 0.88 0 18 5.56 Yes 72 -4.63 No 0 0 No -24 0.65 No 40 53.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59850361 - NM_032043 BRIP1 0 . . . 1.14 62.49 21 4.69 No 65 0.74 No 0 0 No -20 0.8 Yes 48 76.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68773612 + NM_004360 CDH1 0 . . . 7.36 87.63 18 5.67 Yes 9 1.52 Yes 0 0 No -18 0.72 Yes 49 87.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33443481 - NM_002878 RAD51D 0 . . . 6.85 84.74 34 4.37 No 4 0.31 No 0 0 No -29 0.51 No 47 40.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47725723 + NM_000251 MSH2 0 . . . 4.97 71.88 31 5.47 No 67 -4.01 No 0 0 No -31 0.34 No 43 85.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41240785 - NM_007294 BRCA1 0 . . . 7.36 74.34 35 6.39 Yes -1 1.25 Yes 0 0 No -32 0.74 Yes 36 79.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68731714 + NM_133509 RAD51B 0 . . . 2.47 68.67 38 6.63 Yes 32 0.36 No 0 0 No -37 0.61 No 45 50.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68588504 + NM_133509 RAD51B 0 . . . 1.43 74.02 24 4.62 No 67 -4.53 No 0 0 No -23 0.64 No 60 21.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215635204 - NM_000465 BARD1 0 . . . 0.79 68.07 17 5.29 No 25 0.62 No 0 0 No -16 0.34 No 29 70.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47666940 + NM_000251 MSH2 0 . . . 2.98 83.07 21 4.69 No 62 -0.08 No 0 0 No -24 0.57 No 54 58.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680974 + NM_000251 MSH2 0 . . . 1.54 0 27 5.39 No 10 0.67 No 0 0 No -24 0.75 Yes 30 91.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215670238 - NM_000465 BARD1 0 . . . 1.47 72 21 4.25 No 38 0.54 No 0 0 No -20 0.94 Yes 41 55.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190716806 + NM_000534 PMS1 0 . . . 0.22 73.62 26 5 No 0 0.4 No 0 0 No -25 0.91 Yes 54 59.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75504935 - NM_001040108 MLH3 0 . . . 0.64 67.52 15 5.29 No 48 1.7 Yes 0 0 No -21 0.52 No 41 35.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56778446 + NM_058216 RAD51C 0 . . . 8.01 83.13 15 4.58 No 64 1.32 Yes 0 0 No -20 0.85 Yes 48 91.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37073479 + NM_000249 MLH1 0 . . . 8.69 92.14 32 5.71 Yes 43 1.06 Yes 0 0 No -31 0.44 No 49 72.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59841819 - NM_032043 BRIP1 0 . . . 2.77 83.2 23 5.18 No 40 -3.04 No 0 0 No -27 0.48 No 46 60.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47644810 + NM_000251 MSH2 0 . . . 4.78 81.84 12 5.02 No 5 0.83 Yes 0 0 No -21 0.23 No 39 53.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32937670 + NM_000059 BRCA2 0 . . . 5.61 83.48 35 5.91 Yes 59 -3.02 No 0 0 No -28 0.58 No 44 62.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89657775 + NM_000314 PTEN 0 . . . 5.3 86.6 23 4.12 No 76 1.72 Yes 0 0 No -22 0.85 Yes 51 58.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89698671 + NM_000314 PTEN 0 . . . 0.67 57.9 10 3.41 No 15 0.98 Yes 0 0 No -36 0.63 No 30 62.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108190571 + NM_000051 ATM 0 . . . 3.04 72.57 18 4.39 No 72 0.89 Yes 0 0 No -17 0.8 Yes 23 56.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190681502 + NM_000534 PMS1 0 . . . 3.05 70.99 32 5.76 Yes 26 0.78 Yes 0 0 No -34 0.53 No 29 89.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68389757 + NM_133509 RAD51B 0 . . . 6.03 73.46 14 4.47 No 14 1.69 Yes 0 0 No -19 0.54 No 44 59.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75499959 - NM_001040108 MLH3 0 . . . 1.41 66.17 19 4.57 No 63 -5.04 No 0 0 No -18 0.55 No 44 48.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47688538 + NM_000251 MSH2 0 . . . 2.92 62.54 30 6 Yes -4 0.6 No 0 0 No -30 0.54 No 44 48.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47731934 + NM_000251 MSH2 0 . . . 1.59 68.64 31 5.83 Yes 65 -3.69 No 0 0 No -30 0.82 Yes 43 69.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108122251 + NM_000051 ATM 0 . . . 3.44 73.39 12 5.3 No 22 1.38 Yes 0 0 No -22 0.55 No 36 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68758618 + NM_133509 RAD51B 0 . . . 1.51 73.33 17 6.16 Yes 75 1.59 Yes 0 0 No -34 0.43 No 48 62.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108222746 + NM_000051 ATM 0 . . . 4.02 71.65 21 5.69 Yes 63 0.4 No 0 0 No -27 0.51 No 51 45.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68684702 + NM_133509 RAD51B 0 . . . 0.11 74.4 18 6.32 Yes 74 -2.46 No 0 0 No -25 0.79 Yes 48 56.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190727462 + NM_000534 PMS1 0 . . . 0.01 64.05 30 6.18 Yes 69 0.14 No 0 0 No -29 0.71 Yes 36 45.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68696781 + NM_133509 RAD51B 0 . . . 6.76 81.89 30 5.66 Yes 33 1.18 Yes 0 0 No -29 0.73 Yes 54 47.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47739959 + NM_000251 MSH2 0 . . . 8.06 87.67 18 4.55 No 3 1.4 Yes 0 0 No -17 0.76 Yes 55 58.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108131039 + NM_000051 ATM 0 . . . 2.94 86.19 32 6.47 Yes 37 1.57 Yes 0 0 No -31 0.69 Yes 21 61.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94155140 - NM_005591 MRE11 0 . . . 3.39 75.53 34 5.89 Yes 69 -6.06 No 0 0 No -24 0.54 No 50 55.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68722501 + NM_133509 RAD51B 0 . . . 3.1 79.53 21 4.69 No 73 1.46 Yes 0 0 No -18 0.54 No 48 77.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190736479 + NM_000534 PMS1 0 . . . 7.16 76.81 16 5.72 Yes 2 1.2 Yes 0 0 No -39 0.23 No 49 85.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105209148 + NM_021930 RINT1 0 . . . 1.61 74.68 42 6.65 Yes 71 0.99 Yes 0 0 No -29 0.54 No 54 53.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68366068 + NM_133509 RAD51B 0 . . . 0.45 61.64 18 5.45 No 60 1.69 Yes 0 0 No -23 0.82 Yes 50 66.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108132067 + NM_000051 ATM 0 . . . 4.17 70.05 25 5.55 No 6 2.34 Yes 0 0 No -24 0.62 No 39 64.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131913366 + NM_005732 RAD50 0 . . . 9.61 89.58 23 4.44 No 33 1.55 Yes 0 0 No -22 0.75 Yes 33 78.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68715560 + NM_133509 RAD51B 0 . . . 3.5 80.36 15 4.47 No 19 0.42 No 0 0 No -50 0.52 No 39 74.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68903417 + NM_133509 RAD51B 0 . . . 5.89 88.94 44 5.5 No 2 1.23 Yes 0 0 No -43 0.47 No 13 44.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68790889 + NM_004360 CDH1 0 . . . 0.33 0 23 4.9 No 71 -4.69 No 0 0 No -22 0.87 Yes 51 58.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68699845 + NM_133509 RAD51B 0 . . . 2.74 63.96 16 4.69 No 64 0.87 Yes 0 0 No -32 0.69 Yes 50 85.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89700363 + NM_000314 PTEN 0 . . . 2.74 82.22 31 4.4 No 31 1.47 Yes 0 0 No -23 0.82 Yes 27 87.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45801026 - NM_001048171 MUTYH 0 . . . 1.89 81.69 20 5.57 Yes 65 -4.12 No 0 0 No -19 0.68 Yes 46 90.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68446772 + NM_133509 RAD51B 0 . . . 5.33 71.77 26 5.1 No 60 0.98 Yes 0 0 No -25 0.87 Yes 49 79.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47781803 + NM_000251 MSH2 0 . . . 4.58 91.9 17 4.47 No 62 -3.42 No 0 0 No -16 0.87 Yes 47 52.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108155788 + NM_000051 ATM 0 . . . 3.34 68.95 17 5.27 No 12 1.18 Yes 0 0 No -27 0.38 No 42 85.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68426150 + NM_133509 RAD51B 0 . . . 3.58 80.12 18 4.69 No 9 1.7 Yes 0 0 No -17 0.83 Yes 49 90.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68902362 + NM_133509 RAD51B 0 . . . 5.94 76.26 16 4.69 No 12 1.22 Yes 0 0 No -31 0.46 No 46 67.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1204321 + NM_000455 STK11 0 . . . 4.62 75.08 33 4.87 No 20 0.37 No 0 0 No -19 0.56 No 37 69.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94228373 - NM_005591 MRE11 0 . . . 1.01 66.63 19 4.04 No 13 1.1 Yes 0 0 No -22 0.84 Yes 45 83.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47698214 + NM_000251 MSH2 0 . . . 0.19 61.73 29 5.35 No 61 -2.71 No 0 0 No -28 0.56 No 33 71.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68741821 + NM_133509 RAD51B 0 . . . 3.48 70.13 18 3.18 No 64 1.5 Yes 0 0 No -18 0.74 Yes 45 57.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68444911 + NM_133509 RAD51B 0 . . . 0.62 65.29 21 4.78 No 13 0.6 No 0 0 No -20 0.91 Yes 45 78.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68867038 + NM_004360 CDH1 0 . . . 6.8 83.19 25 5.02 No 50 1.65 Yes 0 0 No -21 0.34 No 38 48.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32960307 + NM_000059 BRCA2 0 . . . 1.24 66.72 32 9.18 Yes 34 1.77 Yes 0 0 No -31 0.38 No 24 81.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89693968 + NM_000314 PTEN 0 . . . 4.84 72.74 22 3.77 No 73 0.67 No 0 0 No -21 0.57 No 35 69.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68865585 + NM_133509 RAD51B 0 . . . 0.69 86.04 14 4.27 No 51 -2.8 No 0 0 No -26 0.42 No 52 65.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68675979 + NM_133509 RAD51B 0 . . . 4.95 79.98 73 8.19 Yes 39 1.26 Yes 0 0 No -26 0.59 No 39 47.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6021007 - NM_000535 PMS2 0 . . . 5.09 74.78 25 6.4 Yes 54 0.63 No 0 0 No -23 0.34 No 47 79.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68499007 + NM_133509 RAD51B 0 . . . 1.26 79.99 37 6 Yes 15 1.39 Yes 0 0 No -29 0.27 No 48 91.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105173671 + NM_021930 RINT1 0 . . . 1.74 66.6 30 5.88 Yes 63 0.38 No 0 0 No -26 0.65 No 37 31.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190687015 + NM_000534 PMS1 0 . . . 5.04 65.44 15 4.29 No NA NA NA 0 0 No -25 0.93 Yes 42 48.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215651609 - NM_000465 BARD1 0 . . . 2.51 74.35 22 6.08 Yes 42 0.12 No 0 0 No -30 0.77 Yes 45 82.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131939312 + NM_005732 RAD50 0 . . . 8.02 78 21 4.47 No -4 0.13 No 0 0 No -58 0.51 No 46 71.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89632220 + NM_000314 PTEN 0 . . . 2.04 0 27 5.66 Yes 52 1.22 Yes 0 0 No -26 0.6 No 38 63.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94183771 - NM_005591 MRE11 0 . . . 9.67 93.48 17 5.57 Yes 6 0.83 Yes 0 0 No -16 0.62 No 43 61.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68301395 + NM_133509 RAD51B 0 . . . 9.5 89.48 38 7.13 Yes 21 1.47 Yes 0 0 No -29 0.64 No 37 89.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40985957 + NM_001164269 RAD51 0 . . . 2.79 84.41 46 4.9 No 12 0.28 No 0 0 No -20 0.76 Yes 46 93.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32909004 + NM_000059 BRCA2 0 . . . 6.5 79.56 30 6.02 Yes 15 1.68 Yes 0 0 No -18 0.61 No 43 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47662558 + NM_000251 MSH2 0 . . . 4.5 71.34 37 7.18 Yes 13 0.41 No 0 0 No -36 0.87 Yes 45 81.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69115267 + NM_133509 RAD51B 0 . . . 2.05 68.62 15 5.29 No 15 0.26 No 0 0 No -48 0.62 No 48 57.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108217445 + NM_000051 ATM 0 . . . 6.45 78.57 15 4.95 No 1 1.37 Yes 0 0 No -26 0.46 No 51 76.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21970529 - NM_000077 CDKN2A 0 . . . 4.4 82.87 26 7.86 Yes 59 -1.15 No 31 0.97 Yes -46 0.59 No 45 35.94 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 41228928 - NM_007294 BRCA1 0 . . . 8.55 98.1 53 5.16 No 41 0.34 No 0 0 No -26 0.73 Yes 40 28.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68409705 + NM_133509 RAD51B 0 . . . 6.52 98.74 35 8.06 Yes -3 -1.76 No 0 0 No -40 0.6 No 53 62.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59891946 - NM_032043 BRIP1 0 . . . 7.36 84.57 44 6.51 Yes 1 0.21 No 0 0 No -24 0.65 No 45 41.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94227980 - NM_005591 MRE11 0 . . . 4.93 80.06 12 5.65 Yes 2 0.54 No 0 0 No -25 0.59 No 46 31.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29093978 - NM_001005735 CHEK2 0 . . . 2.23 77.02 16 4.55 No 10 0.41 No 0 0 No -31 0.34 No 48 89.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68422044 + NM_133509 RAD51B 0 . . . 4.2 79.05 19 4.69 No 8 0.16 No 0 0 No -26 0.59 No 47 46.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68688821 + NM_133509 RAD51B 0 . . . 0.66 49.51 14 4.81 No 70 -3.61 No 0 0 No -23 0.62 No 44 54.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68749083 + NM_133509 RAD51B 0 . . . 0.22 77.89 23 5.72 Yes 15 0.66 No 0 0 No -22 0.88 Yes 49 38.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68866674 + NM_133509 RAD51B 0 . . . 3.95 84.76 25 5.39 No 19 1.52 Yes 0 0 No -22 0.77 Yes 49 39.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131958483 + NM_005732 RAD50 0 . . . 4.79 74.84 19 5.44 No 49 0.96 Yes 0 0 No -18 0.77 Yes 44 92.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68813935 + NM_133509 RAD51B 0 . . . 1.93 72.29 30 6.72 Yes -3 1.05 Yes 0 0 No -39 0.46 No 42 69.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32955200 + NM_000059 BRCA2 0 . . . 2.32 69.72 23 5.06 No 56 0.27 No 0 0 No -57 0.22 No 40 45.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94162841 - NM_005591 MRE11 0 . . . 4.29 81.39 18 5.39 No 59 0.04 No 0 0 No -17 0.63 No 51 78.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68925976 + NM_133509 RAD51B 0 . . . 1.32 57.74 29 4.26 No 32 -2.79 No 0 0 No -28 0.87 Yes 62 34.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131940375 + NM_005732 RAD50 0 . . . 7.61 92.52 41 4.89 No 6 0.76 No 0 0 No -32 0.3 No 52 85.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41268240 - NM_007294 BRCA1 0 . . . 4.04 77.58 32 5.74 Yes 60 0.48 No 0 0 No -20 0.63 No 31 65.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59854731 - NM_032043 BRIP1 0 . . . 7.96 81.34 29 5.91 Yes 1 0.79 Yes 0 0 No -28 0.92 Yes 48 56.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68849638 + NM_133509 RAD51B 0 . . . 5.62 70.87 29 7.68 Yes 74 -3.13 No 0 0 No -28 0.89 Yes 44 84.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29099185 - NM_001005735 CHEK2 0 . . . 5.49 77.3 26 5.19 No 17 1.22 Yes 0 0 No -25 0.92 Yes 45 94.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69149351 + NM_133509 RAD51B 0 . . . 7.14 83.15 17 7.07 Yes 61 -3.14 No 0 0 No -27 0.58 No 48 66.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68804472 + NM_133509 RAD51B 0 . . . 7.32 80.41 16 4.12 No 28 0.54 No 0 0 No -15 0.75 Yes 47 54.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89628966 + NM_000314 PTEN 0 . . . 1.56 87.16 31 6.03 Yes 0 0.23 No 0 0 No -30 0.81 Yes 50 83.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68788599 + NM_004360 CDH1 0 . . . 1.13 0 47 8.17 Yes -2 0.06 No 0 0 No -46 0.67 Yes 35 61.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190701329 + NM_000534 PMS1 0 . . . 1.93 0 23 4.79 No 7 0.2 No 0 0 No -22 0.87 Yes 47 90.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94180901 - NM_005591 MRE11 0 . . . 1.19 81.72 50 6.35 Yes 33 0.96 Yes 0 0 No -44 0.34 No 50 80.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59895201 - NM_032043 BRIP1 0 . . . 3.32 79.8 15 5.71 Yes 54 0.65 No 0 0 No -28 0.29 No 45 63.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131901869 + NM_005732 RAD50 0 . . . 1.34 77.43 35 7.54 Yes 4 1.24 Yes 0 0 No -34 0.77 Yes 42 36.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47682025 + NM_000251 MSH2 0 . . . 5.49 72.7 23 4.59 No 54 1.97 Yes 0 0 No -22 0.39 No 47 87.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190707554 + NM_000534 PMS1 0 . . . 5.41 71.74 24 3.85 No 68 -5.82 No 0 0 No -23 0.62 No 43 73.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68807913 + NM_004360 CDH1 0 . . . 0.39 77.36 17 4.96 No 8 0.96 Yes 0 0 No -25 0.45 No 50 95.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68829033 + NM_133509 RAD51B 0 . . . 3.84 81.17 31 6.86 Yes 56 -5.02 No 0 0 No -30 0.88 Yes 41 55.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21978648 - NM_000077 CDKN2A 0 . . . 0.91 62.5 16 5.22 No 51 -4.96 No 0 0 No -28 0.44 No 43 34.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29082671 - NM_001005735 CHEK2 0 . . . 6.33 85.8 34 6.02 Yes 56 0.79 Yes 0 0 No -34 0.69 Yes 51 78.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47652587 + NM_000251 MSH2 0 . . . 0.68 65.65 29 4.9 No 67 0.92 Yes 0 0 No -28 0.67 Yes 50 38.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37070068 + NM_000249 MLH1 0 . . . 3.13 67.87 26 5.57 Yes 67 0.28 No 0 0 No -30 0.48 No 53 63.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59870646 - NM_032043 BRIP1 0 . . . 2.06 0 32 7.13 Yes 69 0.78 Yes 0 0 No -31 0.92 Yes 43 58.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89709897 + NM_000314 PTEN 0 . . . 3.63 66.31 29 8.25 Yes 55 1.21 Yes 0 0 No -31 0.46 No 42 45.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89663328 + NM_000314 PTEN 0 . . . 3.72 77.24 34 5.92 Yes 7 0.89 Yes 0 0 No -33 0.54 No 44 63.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29083103 - NM_001005735 CHEK2 0 . . . 3.4 71.9 30 5.18 No 6 1.12 Yes 0 0 No -30 0.36 No 32 50.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69020947 + NM_133509 RAD51B 0 . . . 6.89 76.63 24 5.39 No 11 1.39 Yes 0 0 No -57 0.84 Yes 42 55.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108118270 + NM_000051 ATM 0 . . . 1.44 0 10 5 No 50 -3.49 No 0 0 No -20 0.76 Yes 36 49.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68843947 + NM_133509 RAD51B 0 . . . 2.52 76.81 23 4.49 No 61 0.65 No 0 0 No -22 0.86 Yes 40 63.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41226602 - NM_007294 BRCA1 0 . . . 2.99 81 29 5.22 No 23 1.48 Yes 0 0 No -28 0.76 Yes 35 86.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105174103 + NM_021930 RINT1 0 . . . 2.27 64.59 27 5.39 No 8 0.14 No 0 0 No -26 0.71 Yes 50 34.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59763609 - NM_032043 BRIP1 0 . . . 1.38 72.3 18 4.41 No 64 -1.74 No 0 0 No -49 0.45 No 50 29.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47660559 + NM_000251 MSH2 0 . . . 6.15 84.37 55 8.34 Yes 41 -0.21 No 0 0 No -22 0.29 No 45 26.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108113084 + NM_000051 ATM 0 . . . 0.78 70.58 32 5.14 No 70 -6.09 No 0 0 No -32 0.69 Yes 37 24.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104182772 - NM_001100119 XRCC3 0 . . . 1.9 64.76 22 5.75 Yes NA NA NA 0 0 No -26 0.84 Yes 26 36.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47799302 + NM_000251 MSH2 0 . . . 0.18 71.63 14 5.51 No 34 -2.23 No 0 0 No -20 0.51 No 39 29.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56798173 + NM_058216 RAD51C 0 . . . 6.97 80.16 22 5.08 No 72 0.75 No 0 0 No -21 0.8 Yes 46 65.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32892512 + NM_000059 BRCA2 0 . . . 7.58 72.07 16 5.39 No 66 0.41 No 0 0 No -30 0.62 No 51 52.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37041267 + NM_000249 MLH1 0 . . . 1.54 83.64 19 5 No 74 1.42 Yes 0 0 No -29 0.49 No 42 38.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152345468 - NM_005431 XRCC2 0 . . . 6.4 89.36 20 5.1 No 2 1.05 Yes 0 0 No -22 0.49 No 15 36.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29134814 - NM_001005735 CHEK2 0 . . . 6.73 83.01 10 6.35 Yes 9 0.92 Yes 0 0 No -34 0.54 No 40 90.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47802828 + NM_000251 MSH2 0 . . . 3.93 81.8 44 6.87 Yes 7 0.24 No 0 0 No -22 0.71 Yes 48 75.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7583718 - NM_000546 TP53 0 . . . 8.08 83.11 15 4.58 No 65 -3.52 No 0 0 No -27 0.36 No 48 67.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29082760 - NM_001005735 CHEK2 0 . . . 1.23 69.08 41 6.48 Yes 68 1.23 Yes 0 0 No -40 0.66 No 31 54.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37037524 + NM_000249 MLH1 0 . . . 2 80.34 10 4.23 No 32 1.14 Yes 0 0 No -37 0.38 No 42 46.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190657154 + NM_000534 PMS1 0 . . . 1.63 68.89 128 11.86 Yes -4 1.2 Yes 0 0 No -41 0.52 No 39 34.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47630819 + NM_000251 MSH2 0 . . . 6.55 69.59 20 5 No 76 1.29 Yes 0 0 No -36 0.56 No 46 49.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32962466 + NM_000059 BRCA2 0 . . . 1.73 78.8 25 5.12 No 33 1.17 Yes 0 0 No -24 0.53 No 40 76.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94164065 - NM_005591 MRE11 0 . . . 1.72 0 19 5 No 25 0.14 No 0 0 No -18 0.49 No 33 63.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94214031 - NM_005591 MRE11 0 . . . 5.84 85.43 17 5.83 Yes 57 1.42 Yes 0 0 No -24 0.42 No 50 52.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59810849 - NM_032043 BRIP1 0 . . . 4.65 79.56 12 4.25 No 52 -4.3 No 0 0 No -22 0.79 Yes 45 56.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108098572 + NM_000051 ATM 0 . . . 0.51 0 13 3.71 No 66 -6.22 No 0 0 No -20 0.66 No 52 24.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69046492 + NM_133509 RAD51B 0 . . . 5.86 82.98 19 5.14 No 28 0.39 No 0 0 No -26 0.85 Yes 30 72.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29131843 - NM_001005735 CHEK2 0 . . . 5.28 86.54 14 5.74 Yes 3 0.78 Yes 0 0 No -19 0.35 No 21 65.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68615510 + NM_133509 RAD51B 0 . . . 3.59 77.19 29 5.77 Yes 66 -3.27 No 0 0 No -28 0.52 No 39 57.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68720405 + NM_133509 RAD51B 0 . . . 4.82 85.95 17 5.37 No 49 -3.6 No 0 0 No -16 0.59 No 38 71.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68452284 + NM_133509 RAD51B 0 . . . 4.01 86.62 49 6.77 Yes 73 0.5 No 0 0 No -32 0.87 Yes 53 61.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59851981 - NM_032043 BRIP1 0 . . . 4.4 66.07 25 5.38 No 33 0.58 No 0 0 No -22 0.86 Yes 35 82.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68383397 + NM_133509 RAD51B 0 . . . 6.12 82.78 16 4.58 No 49 -4.88 No 0 0 No -36 0.81 Yes 43 62.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190663122 + NM_000534 PMS1 0 . . . 2.3 74.61 24 5.92 Yes 42 -1.59 No 0 0 No -23 0.88 Yes 51 54.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215603399 - NM_000465 BARD1 0 . . . 5.04 74.46 19 4.58 No 15 0.95 Yes 0 0 No -18 0.79 Yes 30 87.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23645001 - NM_024675 PALB2 0 . . . 6.96 80.96 34 5.55 No 2 1.83 Yes 0 0 No -27 0.69 Yes 45 85.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41008148 + NM_001164269 RAD51 0 . . . 0.82 65.09 34 5.92 Yes 55 0.96 Yes 0 0 No -30 0.62 No 28 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108174499 + NM_000051 ATM 0 . . . 1.62 73.97 19 4.49 No 38 0.33 No 0 0 No -23 0.86 Yes 46 45.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68735510 + NM_133509 RAD51B 0 . . . 9.16 84.48 44 6.88 Yes 14 1.28 Yes 0 0 No -18 0.61 No 44 91.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152354155 - NM_005431 XRCC2 0 . . . 3.82 85.51 22 3.55 No 6 1.19 Yes 0 0 No -21 0.69 Yes 52 71.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47660888 + NM_000251 MSH2 0 . . . 2.88 69.07 54 7.22 Yes 31 2.28 Yes 0 0 No -26 0.71 Yes 27 71.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68416359 + NM_133509 RAD51B 0 . . . 3.09 68.84 34 6.32 Yes 29 1.36 Yes 0 0 No -33 0.84 Yes 43 90.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47672020 + NM_000251 MSH2 0 . . . 2.88 72.63 22 5.19 No 16 1.63 Yes 0 0 No -21 0.64 No 42 92.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68668596 + NM_133509 RAD51B 0 . . . 2.64 66.45 52 7.85 Yes 59 1.76 Yes 0 0 No -39 0.65 No 33 62.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59903092 - NM_032043 BRIP1 0 . . . 5.41 82.52 22 7.38 Yes 76 1.22 Yes 0 0 No -21 0.88 Yes 44 72.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68647359 + NM_133509 RAD51B 0 . . . 1.62 0 28 5.47 No 44 -4.58 No 0 0 No -24 0.53 No 50 46.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69058770 + NM_133509 RAD51B 0 . . . 4.1 79.55 13 4.79 No 24 1.35 Yes 0 0 No -20 0.6 No 34 79.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69090319 + NM_133509 RAD51B 0 . . . 8.14 74.1 9 3.87 No 0 0.7 No 0 0 No -27 0.5 No 58 48.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108234467 + NM_000051 ATM 0 . . . 5.07 89.37 29 5.82 Yes 35 0.54 No 0 0 No -22 0.83 Yes 41 66.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69111248 + NM_133509 RAD51B 0 . . . 4.4 63.46 35 6.78 Yes 13 1.06 Yes 0 0 No -34 0.89 Yes 36 76.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69056104 + NM_133509 RAD51B 0 . . . 4.67 0 16 5.71 Yes 31 2.61 Yes 0 0 No -21 0.76 Yes 27 87.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89713388 + NM_000314 PTEN 0 . . . 0.8 63.48 35 6.67 Yes 47 0.3 No 0 0 No -34 0.62 No 58 28.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7569082 - NM_000546 TP53 0 . . . 3.99 84.95 15 5.74 Yes 72 -1.06 No 0 0 No -46 0.54 No 16 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215649718 - NM_000465 BARD1 0 . . . 3.97 70.03 54 7.55 Yes 16 -2.72 No 0 0 No -26 0.52 No 43 61.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68568316 + NM_133509 RAD51B 0 . . . 10.17 81.06 29 5.93 Yes 8 1.34 Yes 0 0 No -24 0.9 Yes 50 69.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94166873 - NM_005591 MRE11 0 . . . 2.03 72.3 21 5.2 No 54 -4.13 No 0 0 No -20 0.53 No 22 38.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56792349 + NM_058216 RAD51C 0 . . . 1.21 75.86 18 4.62 No 11 0.08 No 0 0 No -18 0.84 Yes 47 70.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131974660 + NM_005732 RAD50 0 . . . 4.42 70.25 24 4.98 No -2 0.32 No 0 0 No -23 0.81 Yes 50 68.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68830569 + NM_004360 CDH1 0 . . . 2.39 85.47 42 5.71 Yes 32 0.42 No 0 0 No -29 0.67 Yes 49 57.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48014545 + NM_000179 MSH6 0 . . . 3.42 76.72 47 7.19 Yes 71 0.12 No 0 0 No -28 0.67 Yes 46 63.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152367457 - NM_005431 XRCC2 0 . . . 1.29 0 62 7.7 Yes 67 0.55 No 0 0 No -24 0.69 Yes 43 73.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68579345 + NM_133509 RAD51B 0 . . . 0.35 0 36 4.84 No 4 0.71 No 0 0 No -12 0.36 No 43 63.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94166736 - NM_005591 MRE11 0 . . . 8.3 92.05 19 5.57 Yes 8 0.64 No 0 0 No -31 0.75 Yes 50 84.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68899350 + NM_133509 RAD51B 0 . . . 0.69 76.69 13 4.87 No 69 -1.6 No 0 0 No -20 0.37 No 44 66.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68951376 + NM_133509 RAD51B 0 . . . 2.87 71.41 43 9.31 Yes 60 1.67 Yes 0 0 No -42 0.57 No 50 60.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75508837 - NM_001040108 MLH3 0 . . . 6.83 77.04 18 4.14 No 63 -1.31 No 0 0 No -20 0.39 No 45 72.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68308831 + NM_133509 RAD51B 0 . . . 4.73 70.72 23 5.29 No 2 1.51 Yes 0 0 No -22 0.73 Yes 45 63.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47703458 + NM_000251 MSH2 0 . . . 0.05 74.14 27 5.74 Yes 7 1.27 Yes 0 0 No -26 0.82 Yes 51 81.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215625770 - NM_000465 BARD1 0 . . . 0.6 67.2 16 4.53 No 39 0.35 No 0 0 No -27 0.59 No 19 81.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23638563 - NM_024675 PALB2 0 . . . 2.89 68.34 17 4.68 No 21 1.7 Yes 0 0 No -23 0.73 Yes 42 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40985789 + NM_001164269 RAD51 0 . . . 0.06 79.47 18 6.58 Yes 20 0.82 Yes 0 0 No -25 0.58 No 38 96.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32902589 + NM_000059 BRCA2 0 . . . 0.93 72.51 22 4.42 No 37 1.41 Yes 0 0 No -24 0.77 Yes 21 73.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68836772 + NM_004360 CDH1 0 . . . 2.6 78.5 17 5.29 No 70 1.52 Yes 0 0 No -16 0.45 No 47 59.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89686560 + NM_000314 PTEN 0 . . . 2.63 83.65 35 6 Yes 68 -4.25 No 0 0 No -30 0.57 No 50 78.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68861560 + NM_004360 CDH1 0 . . . 3.34 69.02 20 5.1 No 17 -2.01 No 0 0 No -19 0.69 Yes 45 67.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108235227 + NM_000051 ATM 0 . . . 0.57 69.98 19 4.8 No 27 1.29 Yes 0 0 No -24 0.67 Yes 31 37.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105200814 + NM_021930 RINT1 0 . . . 2.12 82.08 26 5.31 No 66 -4.37 No 0 0 No -25 0.61 No 45 65.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68872851 + NM_133509 RAD51B 0 . . . 5.62 83.98 32 4.24 No 39 0.97 Yes 0 0 No -48 0.51 No 50 71.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108175147 + NM_000051 ATM 0 . . . 1.97 61.51 26 5 No 75 2.18 Yes 0 0 No -25 0.77 Yes 36 62.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215590258 - NM_000465 BARD1 0 . . . 3.29 74.06 25 6.08 Yes 58 0.91 Yes 0 0 No -24 0.77 Yes 39 78.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68600816 + NM_133509 RAD51B 0 . . . 3.1 67.54 9 3.55 No 53 0.14 No 0 0 No -8 0.22 No 39 68.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68501901 + NM_133509 RAD51B 0 . . . 9.7 91.42 31 6.42 Yes 18 1.2 Yes 0 0 No -30 0.71 Yes 40 97.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108109250 + NM_000051 ATM 0 . . . 1.43 80.49 21 5.93 Yes 52 0.96 Yes 0 0 No -21 0.67 Yes 30 61.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59800339 - NM_032043 BRIP1 0 . . . 2.86 81.61 26 3.9 No 62 0.5 No 0 0 No -25 0.91 Yes 49 63.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90992979 - NM_002485 NBN 0 . . . 4.02 72.05 23 5.77 Yes 6 0.44 No 0 0 No -22 0.54 No 48 73.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108108025 + NM_000051 ATM 0 . . . 3.6 73.83 22 4.77 No 57 -3.34 No 0 0 No -24 0.68 Yes 49 59.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68725703 + NM_133509 RAD51B 0 . . . 1.74 69.44 18 5.45 No 0 1.57 Yes 0 0 No -26 0.55 No 47 44.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68803465 + NM_004360 CDH1 0 . . . 1.14 82.74 23 6.15 Yes 62 -4.72 No 0 0 No -35 0.43 No 50 60.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215670212 - NM_000465 BARD1 0 . . . 6.59 69.92 15 5.28 No 1 0.99 Yes 0 0 No -23 0.22 No 57 36.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94203054 - NM_005591 MRE11 0 . . . 5.67 74.66 23 4.98 No 42 -3.55 No 0 0 No -22 0.8 Yes 42 73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41010857 + NM_001164269 RAD51 0 . . . 3.82 80.14 16 4.69 No 76 -2.42 No 0 0 No -35 0.37 No 47 78.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32975041 + NM_000059 BRCA2 0 . . . 2.91 86.47 30 5.43 No 57 -4.12 No 0 0 No -29 0.49 No 49 44.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37089226 + NM_000249 MLH1 0 . . . 3.33 69.11 21 5.81 Yes 35 1.05 Yes 0 0 No -20 0.82 Yes 35 96.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69096184 + NM_133509 RAD51B 0 . . . 0.11 67.22 36 4.3 No 64 -6.06 No 0 0 No -22 0.65 No 47 65.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68934967 + NM_133509 RAD51B 0 . . . 1.57 81.54 38 6.04 Yes 34 1.19 Yes 0 0 No -30 0.36 No 24 68.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68545995 + NM_133509 RAD51B 0 . . . 6.51 79.86 21 4.69 No 63 0.14 No 0 0 No -23 0.89 Yes 45 85.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89718935 + NM_000314 PTEN 0 . . . 0.62 63.94 67 8.34 Yes 64 0.36 No 0 0 No -37 0.32 No 40 78.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56792849 + NM_058216 RAD51C 0 . . . 1.34 74.35 18 5.66 Yes 22 -0.88 No 0 0 No -25 0.49 No 36 73.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47770478 + NM_000251 MSH2 0 . . . 8.33 90.14 22 4.97 No 20 0.41 No 0 0 No -21 0.75 Yes 48 88.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47704612 + NM_000251 MSH2 0 . . . 1.04 74.4 30 5.39 No 60 -5.04 No 0 0 No -29 0.81 Yes 49 32.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108179120 + NM_000051 ATM 0 . . . 7.25 81.56 17 5.52 No 75 1.11 Yes 0 0 No -27 0.54 No 40 57.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90974057 - NM_002485 NBN 0 . . . 3.93 83.56 35 6 Yes 18 0.97 Yes 0 0 No -34 0.72 Yes 49 95.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90974153 - NM_002485 NBN 0 . . . 1.66 0 28 5.66 Yes 10 1.53 Yes 0 0 No -27 0.92 Yes 36 85.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68736944 + NM_133509 RAD51B 0 . . . 6.98 82.57 26 7.74 Yes 53 -4.31 No 0 0 No -25 0.9 Yes 45 48.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33430142 - NM_002878 RAD51D 0 . . . 2.89 76.3 27 5.48 No 56 -2.65 No 0 0 No -26 0.63 No 49 51.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90947041 - NM_002485 NBN 0 . . . 2.83 66.51 13 5.48 No 49 0.55 No 0 0 No -30 0.47 No 61 47.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68295184 + NM_133509 RAD51B 0 . . . 4.75 91.21 31 5.72 Yes 9 0.49 No 0 0 No -30 0.81 Yes 46 66.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68293117 + NM_133509 RAD51B 0 . . . 5.89 84.86 21 5.66 Yes 10 0.49 No 0 0 No -20 0.75 Yes 48 96.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40987117 + NM_001164269 RAD51 0 . . . 1.85 74.49 28 5.2 No 61 1.02 Yes 0 0 No -27 0.51 No 54 57.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68682884 + NM_133509 RAD51B 0 . . . 0.27 75.43 28 5.69 Yes 62 -5.76 No 0 0 No -24 0.62 No 50 91.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37060487 + NM_000249 MLH1 0 . . . 6.4 79.88 18 4.9 No 63 0.68 No 0 0 No -17 0.51 No 43 70.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89649220 + NM_000314 PTEN 0 . . . 3.4 68.5 12 4.24 No 27 0.2 No 0 0 No -32 0.51 No 57 50.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89671011 + NM_000314 PTEN 0 . . . 1.33 0 13 4.78 No 6 0.5 No 0 0 No -25 0.81 Yes 48 46.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23615572 - NM_024675 PALB2 0 . . . 0.75 60.79 20 5.1 No 17 1.18 Yes 0 0 No -27 0.82 Yes 41 56.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75519757 - NM_001040108 MLH3 0 . . . 0.27 63.01 30 6.2 Yes 47 1.08 Yes 0 0 No -29 0.4 No 15 31.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68692282 + NM_133509 RAD51B 0 . . . 6.46 71.87 21 6.23 Yes 46 0.62 No 0 0 No -34 0.44 No 49 44.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59788731 - NM_032043 BRIP1 0 . . . 6.07 82.03 28 5.66 Yes 21 1.32 Yes 0 0 No -31 0.75 Yes 37 71.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45793976 - NM_001048171 MUTYH 0 . . . 9.46 80.79 32 4.71 No 68 0.44 No 0 0 No -31 0.69 Yes 48 90.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68617553 + NM_133509 RAD51B 0 . . . 4.06 80.9 46 7.14 Yes 52 0.34 No 0 0 No -22 0.85 Yes 47 69.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68936605 + NM_133509 RAD51B 0 . . . 3.18 73.58 16 6 Yes 12 0.91 Yes 0 0 No -33 0.53 No 46 87.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69050670 + NM_133509 RAD51B 0 . . . 4.76 72.95 20 5 No 54 0.81 Yes 0 0 No -22 0.8 Yes 55 62.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47726027 + NM_000251 MSH2 0 . . . 3.8 71.79 35 6.14 Yes 58 1.46 Yes 0 0 No -21 0.83 Yes 43 91.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190659887 + NM_000534 PMS1 0 . . . 2.08 83.71 17 4.69 No 8 0.7 No 0 0 No -35 0.56 No 50 80.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40993516 + NM_001164269 RAD51 0 . . . 8.37 94.91 21 5.19 No 42 0.83 Yes 0 0 No -20 0.42 No 40 91.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41269172 - NM_007294 BRCA1 0 . . . 1.66 66.23 21 7.21 Yes 54 0.79 Yes 0 0 No -20 0.81 Yes 26 42.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68791497 + NM_004360 CDH1 0 . . . 1.68 84.75 17 4.77 No 8 0.56 No 0 0 No -16 0.55 No 50 91.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29110517 - NM_001005735 CHEK2 0 . . . 0.24 67.49 14 4.47 No 6 0.39 No 0 0 No -28 0.61 No 52 74.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47806236 + NM_000251 MSH2 0 . . . 9.17 82.15 22 4.8 No 53 0.9 Yes 0 0 No -19 0.75 Yes 45 87.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33433966 - NM_002878 RAD51D 0 . . . 2.61 0 22 4.78 No 58 -4.74 No 0 0 No -45 0.31 No 52 55.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190740060 + NM_000534 PMS1 0 . . . 1.65 72.98 46 7.42 Yes 62 0.23 No 0 0 No -34 0.75 Yes 42 55.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41006403 + NM_001164269 RAD51 0 . . . 0.19 70.23 22 5.09 No 52 -3.97 No 0 0 No -21 0.58 No 47 64.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84385825 - NM_139076 FAM175A 0 . . . 4.59 77.87 20 5.1 No 8 0.51 No 0 0 No -28 0.5 No 50 95.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1210946 + NM_000455 STK11 0 . . . 3.18 71.01 25 6.95 Yes 28 -1.73 No 0 0 No -24 0.7 Yes 21 21.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131958486 + NM_005732 RAD50 0 . . . 3.38 78.75 49 6.74 Yes 52 0.96 Yes 0 0 No -21 0.71 Yes 41 90.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59801553 - NM_032043 BRIP1 0 . . . 0.87 69.93 16 5.75 Yes 48 0.7 No 0 0 No -28 0.28 No 35 67.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84386490 - NM_139076 FAM175A 0 . . . 5.61 73.82 28 5.74 Yes 59 0.23 No 0 0 No -27 0.71 Yes 35 81.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131936374 + NM_005732 RAD50 0 . . . 9.63 94.14 9 5 No 51 1.58 Yes 0 0 No -46 0.61 No 50 74.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152366832 - NM_005431 XRCC2 0 . . . 0.06 0 20 4.61 No 74 0 No 0 0 No -19 0.65 No 42 67.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94178814 - NM_005591 MRE11 0 . . . 1.93 70.23 13 4.66 No 74 0.11 No 0 0 No -21 0.71 Yes 48 54.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32896838 + NM_000059 BRCA2 0 . . . 3.31 80.18 27 5.18 No 75 -3.3 No 0 0 No -26 0.86 Yes 49 90.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68620942 + NM_133509 RAD51B 0 . . . 3.56 77.34 24 5.78 Yes 49 0.75 No 0 0 No -23 0.64 No 40 64.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94218747 - NM_005591 MRE11 0 . . . 3.73 83.25 22 5.22 No 1 0.78 Yes 0 0 No -21 0.69 Yes 45 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69092065 + NM_133509 RAD51B 0 . . . 1.69 0 36 5.77 Yes 20 0.7 No 0 0 No -44 0.57 No 38 52.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108238357 + NM_000051 ATM 0 . . . 3.86 79.75 33 5.66 Yes 17 0.78 Yes 0 0 No -11 0.73 Yes 37 88.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68398455 + NM_133509 RAD51B 0 . . . 7.47 87.82 25 5.39 No 58 1.2 Yes 0 0 No -24 0.74 Yes 55 38.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68407290 + NM_133509 RAD51B 0 . . . 7.38 78.16 26 5.6 Yes 12 2.12 Yes 0 0 No -54 0.4 No 46 88.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68944050 + NM_133509 RAD51B 0 . . . 2.52 85.26 21 4.97 No 49 0.58 No 0 0 No -20 0.63 No 48 64.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190681709 + NM_000534 PMS1 0 . . . 0.18 60.8 22 5.09 No 49 1.6 Yes 0 0 No -21 0.91 Yes 36 75.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23613765 - NM_024675 PALB2 0 . . . 0.79 83.85 29 6.26 Yes 33 1.11 Yes 0 0 No -28 0.77 Yes 50 75.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68432088 + NM_133509 RAD51B 0 . . . 5.51 79.62 14 5.56 Yes 50 1.7 Yes 0 0 No -22 0.29 No 21 73.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68818041 + NM_133509 RAD51B 0 . . . 0.93 73.66 18 6.86 Yes 46 -1.76 No 0 0 No -17 0.4 No 44 57.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131913551 + NM_005732 RAD50 0 . . . 7.09 86.43 14 4.21 No 46 1.69 Yes 0 0 No -23 0.79 Yes 12 91.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94216003 - NM_005591 MRE11 0 . . . 1.09 86.71 16 5.36 No 33 1.12 Yes 0 0 No -19 0.42 No 25 42.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195282 + NM_000051 ATM 0 . . . 1.41 72.27 39 7.83 Yes 41 0.6 No 0 0 No -38 0.7 Yes 13 18.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108151794 + NM_000051 ATM 0 . . . 4.78 62.96 39 5.61 Yes -2 1.12 Yes 0 0 No -27 0.81 Yes 40 59.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68962354 + NM_133509 RAD51B 0 . . . 0.95 67.78 37 5.97 Yes 9 0.02 No 0 0 No -36 0.69 Yes 49 63.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6011822 - NM_000535 PMS2 0 . . . 8.99 78.48 14 7.27 Yes 65 -6.43 No 0 0 No -13 0.32 No 28 76.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32913071 + NM_000059 BRCA2 0 . . . 6.15 80.79 33 5.74 Yes 63 -3.22 No 0 0 No -26 0.68 Yes 48 53.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47686889 + NM_000251 MSH2 0 . . . 3.79 78.68 26 5.5 No 5 1.05 Yes 0 0 No -21 0.72 Yes 42 81.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69061562 + NM_133509 RAD51B 0 . . . 4.5 80.94 16 4.69 No 12 0.81 Yes 0 0 No -22 0.66 Yes 46 54.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59878208 - NM_032043 BRIP1 0 . . . 8.31 82.35 50 10.2 Yes 23 0.63 No 0 0 No -49 0.39 No 40 73.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56778581 + NM_058216 RAD51C 0 . . . 1.27 76.28 23 6.36 Yes 40 -4.56 No 0 0 No -22 0.43 No 51 83.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68924417 + NM_133509 RAD51B 0 . . . 1.76 68.95 16 5.41 No 16 0.96 Yes 0 0 No -23 0.4 No 42 90.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68807562 + NM_004360 CDH1 0 . . . 4.16 69.63 27 4.43 No 44 0.67 No 0 0 No -26 0.48 No 38 88.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68392785 + NM_133509 RAD51B 0 . . . 2.71 66.28 24 5.07 No -1 0.77 No 0 0 No -26 0.32 No 49 33.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40993213 + NM_001164269 RAD51 0 . . . 3.36 63.73 28 5.19 No 1 0.54 No 0 0 No -26 0.84 Yes 50 78.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52438883 - NM_004656 BAP1 0 . . . 4.65 69.29 24 4.79 No 52 -4.71 No 0 0 No -23 0.85 Yes 44 67.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21988825 - NM_000077 CDKN2A 0 . . . 0.51 0 18 4.54 No 4 1.01 Yes 0 0 No -27 0.79 Yes 45 47.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6038131 - NM_000535 PMS2 0 . . . 2.76 79.75 32 5.53 No 34 1.05 Yes 0 0 No -24 0.71 Yes 24 41.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68492337 + NM_133509 RAD51B 0 . . . 5.61 90.96 82 11.36 Yes 38 0.47 No 0 0 No -23 0.47 No 44 63.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41227200 - NM_007294 BRCA1 0 . . . 4.62 70.41 30 6.37 Yes 2 1.53 Yes 0 0 No -29 0.81 Yes 38 56.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108111750 + NM_000051 ATM 0 . . . 6.53 80.24 27 5.48 No 16 0.19 No 0 0 No -26 0.93 Yes 42 97.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68641975 + NM_133509 RAD51B 0 . . . 2.52 73.21 12 5.06 No 70 0.03 No 0 0 No -22 0.45 No 46 63.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104168806 - NM_001100119 XRCC3 0 . . . 2.6 66.04 29 5.42 No 72 0.12 No 0 0 No -28 0.63 No 36 59.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68592290 + NM_133509 RAD51B 0 . . . 2.76 74.53 27 4.2 No 9 0.55 No 0 0 No -26 0.59 No 43 48.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152342939 - NM_005431 XRCC2 0 . . . 2.45 75.74 40 6.97 Yes -1 0.23 No 0 0 No -39 0.47 No 47 71.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47733838 + NM_000251 MSH2 0 . . . 2.88 77.73 16 4.69 No 76 -1.41 No 0 0 No -52 0.41 No 49 68.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68925169 + NM_133509 RAD51B 0 . . . 1.49 74.62 24 5.79 Yes 42 1.77 Yes 0 0 No -23 0.54 No 45 53.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68759554 + NM_133509 RAD51B 0 . . . 2.53 0 30 6.43 Yes 41 -1.93 No 0 0 No -29 0.54 No 34 53.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68943016 + NM_133509 RAD51B 0 . . . 8.15 89.62 23 5.2 No 19 0.98 Yes 0 0 No -22 0.49 No 39 94.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94211667 - NM_005591 MRE11 0 . . . 0.24 64.2 17 6.15 Yes -4 0.31 No 0 0 No -23 0.59 No 18 78.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68911077 + NM_133509 RAD51B 0 . . . 4.7 83.76 12 6.71 Yes 72 0.89 Yes 0 0 No -16 0.2 No 46 53.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59770257 - NM_032043 BRIP1 0 . . . 1.82 74.91 34 5.74 Yes 43 -1.32 No 0 0 No -26 0.26 No 51 52.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89674831 + NM_000314 PTEN 0 . . . 5.2 85.02 36 4.56 No 5 1.23 Yes 0 0 No -35 0.69 Yes 53 82.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68906188 + NM_133509 RAD51B 0 . . . 6.94 83.97 18 4.9 No 74 1.73 Yes 0 0 No -17 0.54 No 34 60.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45799364 - NM_001048171 MUTYH 0 . . . 5.12 78.83 45 8 Yes 45 -4.38 No 0 0 No -27 0.53 No 39 69.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68522491 + NM_133509 RAD51B 0 . . . 7.29 79.61 52 7.56 Yes 22 0.44 No 0 0 No -25 0.59 No 36 54.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47633017 + NM_000251 MSH2 0 . . . 3.47 72.11 62 7.27 Yes 55 0.5 No 0 0 No -37 0.86 Yes 47 47.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59771393 - NM_032043 BRIP1 0 . . . 0.54 61.07 15 4.97 No 35 0.84 Yes 0 0 No -26 0.86 Yes 16 39.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59864799 - NM_032043 BRIP1 0 . . . 2.01 67.11 22 4.58 No 49 0.24 No 0 0 No -21 0.75 Yes 42 44.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59920646 - NM_032043 BRIP1 0 . . . 3.9 70.15 23 3.75 No 2 0.74 No 0 0 No -22 0.76 Yes 44 77.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68790627 + NM_133509 RAD51B 0 . . . 0.74 0 40 5.8 Yes 62 -1.12 No 0 0 No -23 0.85 Yes 49 82.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68924305 + NM_133509 RAD51B 0 . . . 6.17 76.05 16 3.24 No 16 0.13 No 0 0 No -34 0.26 No 39 81.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41229324 - NM_007294 BRCA1 0 . . . 3.66 82.36 17 5.29 No 11 0.9 Yes 0 0 No -25 0.48 No 47 90.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68372311 + NM_133509 RAD51B 0 . . . 6.14 85.29 21 5.2 No 2 1.84 Yes 0 0 No -20 0.29 No 36 75.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47778066 + NM_000251 MSH2 0 . . . 7.65 84.85 17 4.69 No 23 1.55 Yes 0 0 No -16 0.66 No 35 85.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68718341 + NM_133509 RAD51B 0 . . . 1.61 0 16 5.98 Yes 12 0.45 No 0 0 No -33 0.86 Yes 39 69.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190658890 + NM_000534 PMS1 0 . . . 1.3 71.11 16 4.58 No 9 1.04 Yes 0 0 No -15 0.54 No 49 61.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59826621 - NM_032043 BRIP1 0 . . . 7.99 71.23 20 5.83 Yes 68 1.07 Yes 0 0 No -19 0.79 Yes 46 54.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131959278 + NM_005732 RAD50 0 . . . 7.5 87.91 34 6.61 Yes 30 2.05 Yes 0 0 No -33 0.72 Yes 43 83.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89622430 + NM_000314 PTEN 0 . . . 5.5 80.89 46 5.82 Yes 6 1.13 Yes 0 0 No -27 0.61 No 52 97.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68596437 + NM_133509 RAD51B 0 . . . 4.55 70.57 19 5.09 No 12 0.04 No 0 0 No -22 0.88 Yes 46 43.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6038393 - NM_000535 PMS2 0 . . . 4.06 75.55 13 5.47 No 69 1.19 Yes 0 0 No -20 0.36 No 45 59.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68804330 + NM_004360 CDH1 0 . . . 1.5 73.07 51 6.45 Yes -4 0.02 No 0 0 No -51 0.77 Yes 20 27.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68729216 + NM_133509 RAD51B 0 . . . 3.9 72.34 15 5.2 No 16 0.18 No 0 0 No -20 0.62 No 45 50.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108160432 + NM_000051 ATM 0 . . . 3.49 69.56 18 5.41 No 37 0.79 Yes 0 0 No -24 0.67 Yes 47 89.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108110098 + NM_000051 ATM 0 . . . 1.34 84.43 61 9.13 Yes 12 1.38 Yes 0 0 No -28 0.46 No 46 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33425752 - NM_002878 RAD51D 0 . . . 5.5 75.27 31 5.98 Yes 63 -3.41 No 0 0 No -30 0.9 Yes 49 50.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21996378 - NM_000077 CDKN2A 0 . . . 0.79 70.61 50 7.18 Yes 75 -6.43 No 0 0 No -39 0.75 Yes 45 66.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37070661 + NM_000249 MLH1 0 . . . 6.56 76.96 10 4.8 No 38 0.78 Yes 0 0 No -20 0.17 No 46 68.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32955018 + NM_000059 BRCA2 0 . . . 1.34 64.35 22 4.66 No 11 -2.67 No 0 0 No -21 0.53 No 42 52.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37074785 + NM_000249 MLH1 0 . . . 6.41 84.64 15 6.78 Yes 62 2 Yes 0 0 No -26 0.55 No 48 87.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90951973 - NM_002485 NBN 0 . . . 0.55 0 25 5.07 No 72 0.79 Yes 0 0 No -24 0.73 Yes 28 68.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68764044 + NM_133509 RAD51B 0 . . . 1.83 0 15 4.36 No -1 0.64 No 0 0 No -30 0.76 Yes 40 45.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68535346 + NM_133509 RAD51B 0 . . . 3.55 72.37 24 3.27 No 54 0.41 No 0 0 No -19 0.26 No 41 63.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94174457 - NM_005591 MRE11 0 . . . 2.89 72.76 45 7.74 Yes 43 0.12 No 0 0 No -29 0.46 No 45 67.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68751776 + NM_133509 RAD51B 0 . . . 2.12 0 32 6.65 Yes 76 2.92 Yes 0 0 No -32 0.68 Yes 21 88.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59778818 - NM_032043 BRIP1 0 . . . 3.95 74.54 23 5.29 No 34 -3.94 No 0 0 No -29 0.35 No 40 66.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21984809 - NM_000077 CDKN2A 0 . . . 0.37 0 21 3.86 No 76 -5.13 No 0 0 No -27 0.52 No 47 24.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59862060 - NM_032043 BRIP1 0 . . . 0.82 64.46 33 7.45 Yes 71 -3.47 No 0 0 No -32 0.92 Yes 43 89.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40997584 + NM_001164269 RAD51 0 . . . 1.21 72.77 25 5.39 No 70 0.94 Yes 0 0 No -22 0.77 Yes 46 67.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23629844 - NM_024675 PALB2 0 . . . 4.04 73.29 26 5.47 No 26 0.61 No 0 0 No -25 0.75 Yes 26 69.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89628367 + NM_000314 PTEN 0 . . . 1.8 77.48 20 5.67 Yes 71 0.71 No 0 0 No -29 0.58 No 42 36.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190704581 + NM_000534 PMS1 0 . . . 0.19 50.16 30 4.94 No 26 0.3 No 0 0 No -30 0.64 No 38 64.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89623567 + NM_000314 PTEN 0 . . . 0.14 63.92 27 5.55 No 42 -3.17 No 0 0 No -26 0.81 Yes 44 19.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47751274 + NM_000251 MSH2 0 . . . 0.75 0 27 5.39 No 74 0.94 Yes 0 0 No -27 0.89 Yes 39 84.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89727560 + NM_000314 PTEN 0 . . . 0.85 73.87 35 6.08 Yes 27 0.66 No 0 0 No -34 0.83 Yes 44 85.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190704129 + NM_000534 PMS1 0 . . . 6.89 76.9 44 6.93 Yes 23 1.29 Yes 0 0 No -43 0.76 Yes 35 57.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89645589 + NM_000314 PTEN 0 . . . 4.48 78.53 37 5.02 No 50 -5.34 No 0 0 No -14 0.49 No 42 43.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68360903 + NM_133509 RAD51B 0 . . . 2.98 78.54 16 4.61 No 17 1.22 Yes 0 0 No -15 0.23 No 40 65.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108097478 + NM_000051 ATM 0 . . . 6.31 86.67 18 3.82 No 58 0.77 No 0 0 No -21 0.4 No 17 64.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41270827 - NM_007294 BRCA1 0 . . . 1.21 76.63 15 4.46 No 40 -3.69 No 0 0 No -21 0.24 No 48 44.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21978248 - NM_000077 CDKN2A 0 . . . 2.08 0 14 4.06 No 30 0.53 No 0 0 No -17 0.48 No 23 62.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84397035 - NM_139076 FAM175A 0 . . . 10.53 88.99 21 5.18 No 12 1.67 Yes 0 0 No -20 0.87 Yes 45 66.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41269266 - NM_007294 BRCA1 0 . . . 4.17 80.99 21 7.11 Yes 33 1.17 Yes 0 0 No -20 0.5 No 46 35.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56804389 + NM_058216 RAD51C 0 . . . 2.2 72.26 32 5.66 Yes 30 1.05 Yes 0 0 No -31 0.72 Yes 28 75.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68664302 + NM_133509 RAD51B 0 . . . 4.46 77.06 15 4.55 No 75 0.14 No 0 0 No -58 0.57 No 40 41.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32900319 + NM_000059 BRCA2 0 . . . 7.02 85.15 30 5.66 Yes -4 -1.51 No 0 0 No -29 0.43 No 43 60.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23639327 - NM_024675 PALB2 0 . . . 5.28 82.31 25 5.29 No 58 1.35 Yes 0 0 No -21 0.53 No 55 52.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215661945 - NM_000465 BARD1 0 . . . 0.15 78.25 17 5.47 No 5 0.97 Yes 0 0 No -22 0.8 Yes 53 54.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190681383 + NM_000534 PMS1 0 . . . 0.4 72.45 27 5.67 Yes 37 0.84 Yes 0 0 No -26 0.85 Yes 23 66.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47700043 + NM_000251 MSH2 0 . . . 1.59 59.89 25 5.57 Yes 9 0.54 No 0 0 No -24 0.79 Yes 40 47.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59822384 - NM_032043 BRIP1 0 . . . 2.68 71.54 31 5.92 Yes 75 0.5 No 0 0 No -30 0.43 No 50 46.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215599268 - NM_000465 BARD1 0 . . . 1.76 62.66 12 4.24 No 17 0.34 No 0 0 No -23 0.75 Yes 37 60.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56799655 + NM_058216 RAD51C 0 . . . 5.89 74.07 22 5.29 No 9 1.86 Yes 0 0 No -24 0.38 No 49 42.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68906660 + NM_133509 RAD51B 0 . . . 4.37 71.93 15 5.12 No 6 -2.2 No 0 0 No -26 0.26 No 45 65.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68985171 + NM_133509 RAD51B 0 . . . 3.83 72.58 54 7.68 Yes 29 0.29 No 0 0 No -56 0.62 No 44 75.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68571630 + NM_133509 RAD51B 0 . . . 6.55 84.46 32 6.04 Yes 8 0.2 No 0 0 No -31 0.62 No 47 55.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68994759 + NM_133509 RAD51B 0 . . . 2.66 80.43 32 5.74 Yes 67 0.65 No 0 0 No -31 0.49 No 12 36.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48005824 + NM_000179 MSH6 0 . . . 0.47 65.12 29 5.56 Yes 0 0.4 No 0 0 No -28 0.73 Yes 45 58.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41211317 - NM_007294 BRCA1 0 . . . 2.64 77.13 42 6.98 Yes 4 1.48 Yes 0 0 No -30 0.79 Yes 54 73.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69103423 + NM_133509 RAD51B 0 . . . 0.7 0 58 7.28 Yes 5 0.93 Yes 0 0 No -19 0.73 Yes 44 77.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68794688 + NM_133509 RAD51B 0 . . . 3.32 69.63 27 6.16 Yes 44 1.48 Yes 0 0 No -24 0.62 No 14 78.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69106975 + NM_133509 RAD51B 0 . . . 3.33 81.73 36 5.29 No 61 0.53 No 0 0 No -31 0.84 Yes 50 65.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94219963 - NM_005591 MRE11 0 . . . 6.86 81.15 25 7.08 Yes 35 1.01 Yes 0 0 No -24 0.33 No 49 96.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21991794 - NM_000077 CDKN2A 0 . . . 0.69 0 14 5.64 Yes 58 0.4 No 0 0 No -28 0.53 No 29 71.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75488396 - NM_001040108 MLH3 0 . . . 11.74 93.18 34 7.52 Yes 62 1.28 Yes 0 0 No -28 0.69 Yes 49 64.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90958597 - NM_002485 NBN 0 . . . 8.33 85.96 16 5.83 Yes 33 0.43 No 0 0 No -25 0.61 No 46 53.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68831296 + NM_133509 RAD51B 0 . . . 1.14 68.38 16 5.57 Yes 1 0.38 No 0 0 No -30 0.5 No 26 70.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37059474 + NM_000249 MLH1 0 . . . 3.88 71.91 20 5.32 No 51 0.66 No 0 0 No -19 0.48 No 45 73.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37065708 + NM_000249 MLH1 0 . . . 2.98 61.31 31 5.19 No 11 0.17 No 0 0 No -23 0.86 Yes 44 56.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104164209 - NM_001100119 XRCC3 0 . . . 4.07 81.09 17 5.57 Yes 70 -3.47 No 0 0 No -24 0.71 Yes 53 59.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68988525 + NM_133509 RAD51B 0 . . . 2.76 80.44 12 4.24 No 28 -1.54 No 0 0 No -30 0.54 No 48 74.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68520458 + NM_133509 RAD51B 0 . . . 1.61 73.2 23 4.9 No 64 0.53 No 0 0 No -22 0.8 Yes 36 54.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90978758 - NM_002485 NBN 0 . . . 5.92 70.82 29 6.57 Yes 51 0.64 No 0 0 No -28 0.87 Yes 41 90.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89643039 + NM_000314 PTEN 0 . . . 4.46 81.84 24 5.19 No 76 -3.31 No 0 0 No -24 0.48 No 46 87.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23618395 - NM_024675 PALB2 0 . . . 0.24 74.47 42 6.31 Yes 4 0.4 No 0 0 No -18 0.3 No 54 80.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68406002 + NM_133509 RAD51B 0 . . . 4.48 67.67 36 6.16 Yes 0 -2.27 No 0 0 No -35 0.73 Yes 47 32.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68310781 + NM_133509 RAD51B 0 . . . 5.87 80.89 32 5.86 Yes 66 0.42 No 0 0 No -22 0.4 No 46 76.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68967975 + NM_133509 RAD51B 0 . . . 8.02 83.21 19 4.92 No 12 0.72 No 0 0 No -29 0.42 No 43 54.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94167306 - NM_005591 MRE11 0 . . . 1.46 85.39 34 4.58 No 38 0.1 No 0 0 No -27 0.59 No 44 90.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89711109 + NM_000314 PTEN 0 . . . 4.54 68.62 23 5.29 No 31 0.54 No 0 0 No -22 0.66 No 44 55.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68758154 + NM_133509 RAD51B 0 . . . 6.84 74.94 22 5.2 No 60 1.42 Yes 0 0 No -20 0.74 Yes 54 65.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7568027 - NM_000546 TP53 0 . . . 0.34 74.02 18 4.66 No 63 0.74 No 0 0 No -39 0.58 No 36 57.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68939999 + NM_133509 RAD51B 0 . . . 3.62 83.42 27 6.05 Yes 2 0.68 No 0 0 No -30 0.9 Yes 46 52.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33427869 - NM_002878 RAD51D 0 . . . 1.57 74.59 25 5.37 No 28 1.9 Yes 0 0 No -22 0.51 No 30 84.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59755172 - NM_032043 BRIP1 0 . . . 4.13 76.89 36 6.3 Yes 19 1.19 Yes 0 0 No -35 0.48 No 39 47.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152368291 - NM_005431 XRCC2 0 . . . 1.43 0 20 5.53 No 54 1.23 Yes 0 0 No -19 0.35 No 42 81.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41214146 - NM_007294 BRCA1 0 . . . 4.98 79.74 29 5.72 Yes 69 -2.85 No 0 0 No -26 0.66 No 44 68.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68886355 + NM_133509 RAD51B 0 . . . 1.07 0 10 4 No 50 1 Yes 0 0 No -27 0.77 Yes 51 34.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69126436 + NM_133509 RAD51B 0 . . . 4.12 67.17 25 5.92 Yes 62 -1.14 No 0 0 No -25 0.67 Yes 47 70.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37044609 + NM_000249 MLH1 0 . . . 0.5 0 18 6.38 Yes 45 1.39 Yes 0 0 No -34 0.51 No 37 62.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56800057 + NM_058216 RAD51C 0 . . . 1.86 53.18 15 2.58 No 76 0.53 No 0 0 No -27 0.71 Yes 46 47.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48028349 + NM_000179 MSH6 0 . . . 2.06 77.16 22 4.7 No 32 0.11 No 0 0 No -29 0.51 No 49 78.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41211288 - NM_007294 BRCA1 0 . . . 1.1 74.73 29 7.26 Yes 33 1.45 Yes 0 0 No -28 0.93 Yes 39 46.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94148785 - NM_005591 MRE11 0 . . . 6.8 80.36 22 5.29 No 31 0.71 No 0 0 No -21 0.55 No 27 71.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84407182 - NM_139076 FAM175A 0 . . . 0.81 0 33 5.93 Yes 15 0.86 Yes 0 0 No -32 0.63 No 43 83.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47716548 + NM_000251 MSH2 0 . . . 0.21 68.49 14 4.47 No 57 1.2 Yes 0 0 No -33 0.37 No 45 47.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131901089 + NM_005732 RAD50 0 . . . 6.68 80.05 24 6.67 Yes 36 0.89 Yes 0 0 No -23 0.74 Yes 46 61.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29094092 - NM_001005735 CHEK2 0 . . . 0.91 63.81 11 5.2 No 64 1.69 Yes 0 0 No -26 0.52 No 48 34.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94222354 - NM_005591 MRE11 0 . . . 2.4 69.04 20 5.02 No 23 1.16 Yes 0 0 No -20 0.73 Yes 45 49.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68448492 + NM_133509 RAD51B 0 . . . 0.93 69.21 19 5.45 No 38 0.25 No 0 0 No -26 0.64 No 42 32.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152364622 - NM_005431 XRCC2 0 . . . 1.05 77.64 23 5 No 65 0.51 No 0 0 No -22 0.74 Yes 31 70.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104173371 - NM_001100119 XRCC3 0 . . . 5.01 74.66 23 6.08 Yes 57 -4.25 No 0 0 No -22 0.95 Yes 50 85.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68956086 + NM_133509 RAD51B 0 . . . 1.93 89.41 47 5.35 No 76 -4.1 No 0 0 No -25 0.83 Yes 51 87.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37083905 + NM_000249 MLH1 0 . . . 4.15 81.63 32 5.74 Yes 3 1.44 Yes 0 0 No -31 0.47 No 43 83.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89633065 + NM_000314 PTEN 0 . . . 1.45 74.93 20 5.1 No 40 0.48 No 0 0 No -19 0.88 Yes 38 55.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108125509 + NM_000051 ATM 0 . . . 0.19 0 26 5.56 Yes 44 1.17 Yes 0 0 No -25 0.61 No 14 39.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68630422 + NM_133509 RAD51B 0 . . . 5.04 75.91 16 4.35 No 22 1.56 Yes 0 0 No -28 0.31 No 36 90.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68774572 + NM_004360 CDH1 0 . . . 7.95 75.36 19 4.47 No 63 1.43 Yes 0 0 No -32 0.41 No 28 82.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68817723 + NM_133509 RAD51B 0 . . . 5.04 80.82 41 6.3 Yes 10 0.41 No 0 0 No -40 0.5 No 48 94.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75506241 - NM_001040108 MLH3 0 . . . 3.06 74.08 26 5.63 Yes 2 1.59 Yes 0 0 No -25 0.7 Yes 52 57.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1208806 + NM_000455 STK11 0 . . . 5.79 87 35 6.4 Yes 12 1.31 Yes 0 0 No -34 0.67 Yes 46 89.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108159012 + NM_000051 ATM 0 . . . 3.51 82.03 24 5.04 No 34 1.2 Yes 0 0 No -29 0.46 No 24 73.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68593494 + NM_133509 RAD51B 0 . . . 3.73 61.21 22 6.7 Yes 32 1.24 Yes 0 0 No -22 0.76 Yes 52 71.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45804487 - NM_001048171 MUTYH 0 . . . 5.25 84.99 33 5.65 Yes 12 0.59 No 0 0 No -32 0.92 Yes 42 79.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59768119 - NM_032043 BRIP1 0 . . . 0.33 70.92 26 4.92 No 46 1.57 Yes 0 0 No -25 0.67 Yes 12 80.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90949805 - NM_002485 NBN 0 . . . 3.92 75.48 41 7.28 Yes -2 1.05 Yes 0 0 No -40 0.54 No 40 67.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37042706 + NM_000249 MLH1 0 . . . 3.34 77.97 16 5.1 No 5 0.59 No 0 0 No -21 0.44 No 49 67.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215612668 - NM_000465 BARD1 0 . . . 0.93 63.74 18 6.4 Yes 74 1 Yes 0 0 No -21 0.58 No 47 77.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56813108 + NM_058216 RAD51C 0 . . . 4.42 79.82 31 5.57 Yes 61 0.79 Yes 0 0 No -30 0.69 Yes 38 30.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47768606 + NM_000251 MSH2 0 . . . 11 85.04 20 5.46 No 4 2.07 Yes 0 0 No -23 0.79 Yes 41 64.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37071777 + NM_000249 MLH1 0 . . . 3.27 70.25 23 5.08 No 23 1.5 Yes 0 0 No -22 0.6 No 47 68.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33438582 - NM_002878 RAD51D 0 . . . 0.22 84.41 17 4.8 No 5 1.19 Yes 0 0 No -22 0.51 No 46 62.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23649202 - NM_024675 PALB2 0 . . . 1.28 84.25 32 5.74 Yes 35 0.35 No 0 0 No -34 0.41 No 50 42.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131899550 + NM_005732 RAD50 0 . . . 2.03 0 42 4.41 No 69 1.65 Yes 0 0 No -20 0.52 No 33 77.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94158751 - NM_005591 MRE11 0 . . . 2.66 81.61 15 5.35 No 33 0.43 No 0 0 No -28 0.51 No 39 59.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7565990 - NM_000546 TP53 0 . . . 0.19 0 23 4.78 No 45 -2.56 No 0 0 No -22 0.71 Yes 47 35.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68482779 + NM_133509 RAD51B 0 . . . 5.38 81.38 18 6.24 Yes 27 1.02 Yes 0 0 No -25 0.45 No 35 69.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68459153 + NM_133509 RAD51B 0 . . . 0.74 0 25 5.29 No 76 0.31 No 0 0 No -24 0.83 Yes 53 72.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131892225 + NM_005732 RAD50 0 . . . 3.82 72.43 34 6.63 Yes 76 -2.31 No 0 0 No -34 0.54 No 41 93.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21976715 - NM_000077 CDKN2A 0 . . . 0.27 83.39 34 9.69 Yes 35 1.26 Yes 0 0 No -33 0.95 Yes 23 63.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108181145 + NM_000051 ATM 0 . . . 5.08 71.52 17 4.8 No 23 0.35 No 0 0 No -16 0.46 No 34 57.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47712859 + NM_000251 MSH2 0 . . . 2.73 76.43 22 4.64 No 2 0.44 No 0 0 No -21 0.91 Yes 44 64.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68616261 + NM_133509 RAD51B 0 . . . 6.39 81.43 14 5 No 68 1.18 Yes 0 0 No -33 0.66 No 27 64.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59914974 - NM_032043 BRIP1 0 . . . 9.11 84.31 17 5.66 Yes 63 1.12 Yes 0 0 No -16 0.72 Yes 46 75.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59776512 - NM_032043 BRIP1 0 . . . 0.26 51.8 16 5.54 No 72 -4.9 No 0 0 No -36 0.37 No 50 17.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68713391 + NM_133509 RAD51B 0 . . . 1.63 72.72 27 5.36 No 23 1.16 Yes 0 0 No -26 0.79 Yes 46 85.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59803390 - NM_032043 BRIP1 0 . . . 1.72 67.5 15 5.09 No 72 0.32 No 0 0 No -19 0.54 No 46 78.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68905122 + NM_133509 RAD51B 0 . . . 4.66 72.85 50 8.24 Yes -2 0.56 No 0 0 No -49 0.83 Yes 60 52.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41266791 - NM_007294 BRCA1 0 . . . 4.93 76.04 25 4.97 No 25 1.19 Yes 0 0 No -25 0.53 No 40 89.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56786389 + NM_058216 RAD51C 0 . . . 5.9 82 23 5.1 No 70 0.55 No 0 0 No -22 0.93 Yes 41 76.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68892316 + NM_133509 RAD51B 0 . . . 0.7 0 16 4.02 No 27 1.32 Yes 0 0 No -53 0.64 No 31 52.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68298372 + NM_133509 RAD51B 0 . . . 0.31 78.82 13 4.9 No 33 1.43 Yes 0 0 No -22 0.53 No 25 37.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69014956 + NM_133509 RAD51B 0 . . . 2.67 0 17 4.8 No 42 2.02 Yes 0 0 No -21 0.31 No 16 42.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68953539 + NM_133509 RAD51B 0 . . . 4.2 71.95 29 5.93 Yes 55 1.57 Yes 0 0 No -22 0.61 No 47 57.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41000689 + NM_001164269 RAD51 0 . . . 1.93 69.96 24 4.84 No 23 1.25 Yes 0 0 No -23 0.65 No 45 77.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45803858 - NM_001048171 MUTYH 0 . . . 4.94 65.81 40 6.01 Yes 31 -2.23 No 0 0 No -32 0.9 Yes 43 47.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47687198 + NM_000251 MSH2 0 . . . 5.36 76.36 29 6.2 Yes -2 0.19 No 0 0 No -28 0.59 No 48 49.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69088572 + NM_133509 RAD51B 0 . . . 6.5 77.03 30 5.77 Yes 7 0.15 No 0 0 No -30 0.7 Yes 51 80 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68585003 + NM_133509 RAD51B 0 . . . 0.62 67.66 24 5.16 No -4 0.22 No 0 0 No -28 0.56 No 38 82.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37062679 + NM_000249 MLH1 0 . . . 1.77 57.12 22 4.9 No 2 0.08 No 0 0 No -21 0.96 Yes 61 13.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108091809 + NM_000051 ATM 0 . . . 3.32 73.2 30 6.92 Yes 16 0.48 No 0 0 No -29 0.95 Yes 42 97.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59864079 - NM_032043 BRIP1 0 . . . 1.95 72.94 29 5.05 No -1 0.1 No 0 0 No -28 0.86 Yes 59 38.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68824878 + NM_004360 CDH1 0 . . . 0.44 73.24 21 5.02 No 14 0.83 Yes 0 0 No -50 0.32 No 44 74.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68900352 + NM_133509 RAD51B 0 . . . 3.49 70.69 29 5.83 Yes 48 0.91 Yes 0 0 No -29 0.42 No 42 73.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59899717 - NM_032043 BRIP1 0 . . . 4.36 78.11 29 5.36 No 16 0.56 No 0 0 No -26 0.68 Yes 49 46.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59889149 - NM_032043 BRIP1 0 . . . 5.4 92.4 22 7.04 Yes 4 1.25 Yes 0 0 No -21 0.41 No 54 71.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89717758 + NM_000314 PTEN 0 . . . 4.02 80.89 21 5.61 Yes 38 1.13 Yes 0 0 No -20 0.59 No 46 66.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152375150 - NM_005431 XRCC2 0 . . . 0.49 52.38 48 7.28 Yes 57 -5.37 No 0 0 No -26 0.54 No 56 31.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68570656 + NM_133509 RAD51B 0 . . . 1.93 82.64 38 5.64 Yes 32 0.19 No 0 0 No -30 0.63 No 51 42.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89677543 + NM_000314 PTEN 0 . . . 1.46 72.92 27 6.4 Yes 1 0.73 No 0 0 No -26 0.59 No 36 67.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59771673 - NM_032043 BRIP1 0 . . . 0.32 65.51 18 4.36 No 76 -3.5 No 0 0 No -17 0.8 Yes 36 75.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69072857 + NM_133509 RAD51B 0 . . . 1.08 69.57 22 6 Yes 73 -5.85 No 0 0 No -21 0.68 Yes 52 71.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190709628 + NM_000534 PMS1 0 . . . 3.67 84 18 3.9 No 2 1.5 Yes 0 0 No -20 0.61 No 18 42.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68827128 + NM_004360 CDH1 0 . . . 4.17 83.69 16 4.99 No -1 1.06 Yes 0 0 No -25 0.35 No 49 42.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47679473 + NM_000251 MSH2 0 . . . 2.88 86.2 14 4.47 No 33 0.79 Yes 0 0 No -18 0.71 Yes 50 88.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94226143 - NM_005591 MRE11 0 . . . 7.25 81.88 35 6.08 Yes 13 0.58 No 0 0 No -34 0.27 No 45 92.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47767170 + NM_000251 MSH2 0 . . . 0.24 68.78 20 5.57 Yes 60 0.9 Yes 0 0 No -19 0.61 No 51 69.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69007302 + NM_133509 RAD51B 0 . . . 3.33 0 21 4.8 No 67 0.88 Yes 0 0 No -20 0.93 Yes 57 58.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94180995 - NM_005591 MRE11 0 . . . 1.66 0 9 3.87 No 23 0.08 No 0 0 No -21 0.27 No 35 46.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47702015 + NM_000251 MSH2 0 . . . 4.12 69.94 40 6.89 Yes 1 0.06 No 0 0 No -24 0.34 No 42 61.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56791811 + NM_058216 RAD51C 0 . . . 2.96 73.6 30 6.05 Yes 35 0.47 No 0 0 No -23 0.77 Yes 29 51.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68481751 + NM_133509 RAD51B 0 . . . 3.09 74.96 27 5.39 No 6 0.52 No 0 0 No -26 0.77 Yes 52 77.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59814425 - NM_032043 BRIP1 0 . . . 7.57 85.31 21 7.76 Yes 28 0.86 Yes 0 0 No -25 0.53 No 24 59.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68339775 + NM_133509 RAD51B 0 . . . 1.57 60.63 49 6.81 Yes 0 0.05 No 0 0 No -31 0.74 Yes 51 57.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68775012 + NM_004360 CDH1 0 . . . 0.82 60.09 18 4.32 No 48 -3.13 No 0 0 No -25 0.67 Yes 37 44.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47797853 + NM_000251 MSH2 0 . . . 4.66 0 28 6.57 Yes 6 1.13 Yes 0 0 No -23 0.61 No 52 84.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68598507 + NM_133509 RAD51B 0 . . . 3.87 68.65 29 5.29 No 8 0.67 No 0 0 No -21 0.51 No 50 80.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69074927 + NM_133509 RAD51B 0 . . . 3.23 78.07 26 5.3 No 45 1.26 Yes 0 0 No -30 0.56 No 44 57.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68383343 + NM_133509 RAD51B 0 . . . 3.21 84.96 42 5.42 No 75 1.49 Yes 0 0 No -24 0.64 No 48 79.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105197350 + NM_021930 RINT1 0 . . . 0.65 73.42 19 5 No 12 0.23 No 0 0 No -18 0.77 Yes 46 49.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190736630 + NM_000534 PMS1 0 . . . 2.24 71.52 20 5.1 No 18 -1.79 No 0 0 No -19 0.37 No 48 78.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68469238 + NM_133509 RAD51B 0 . . . 4.96 91.21 28 8.5 Yes 9 0.37 No 0 0 No -27 0.71 Yes 46 71.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108140835 + NM_000051 ATM 0 . . . 1.66 0 17 4.43 No 76 0.17 No 0 0 No -23 0.92 Yes 41 36.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69149210 + NM_133509 RAD51B 0 . . . 5.83 75.34 28 5.81 Yes 12 -0.57 No 0 0 No -27 0.82 Yes 45 80.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32915752 + NM_000059 BRCA2 0 . . . 1.6 59.76 20 6.29 Yes 47 1.39 Yes 0 0 No -22 0.56 No 11 60.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52444535 - NM_004656 BAP1 0 . . . 8.05 80.53 27 4.76 No 29 2.12 Yes 0 0 No -26 0.75 Yes 29 84.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33439918 - NM_002878 RAD51D 0 . . . 8.09 90.48 13 5.36 No 28 0.74 No 0 0 No -22 0.43 No 47 64.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32961789 + NM_000059 BRCA2 0 . . . 5.73 76.71 16 5.26 No 17 1.15 Yes 0 0 No -45 0.55 No 41 77.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59863621 - NM_032043 BRIP1 0 . . . 1.34 62.02 66 7.06 Yes 17 1.31 Yes 0 0 No -27 0.54 No 52 47.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152365427 - NM_005431 XRCC2 0 . . . 0.34 71.93 34 7.65 Yes -3 0.42 No 0 0 No -33 0.68 Yes 21 18.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68771366 + NM_004360 CDH1 0 . . . 6.87 87.43 33 8.06 Yes NA NA NA 0 0 No -28 0.6 No 40 26.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799172 + NM_058216 RAD51C 0 . . . 3.64 58.6 26 5.84 Yes -3 0.59 No 0 0 No -25 0.66 No 46 80.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68353894 + NM_133509 RAD51B 0 . . . 0.93 73.93 36 5.97 Yes 69 -4.47 No 0 0 No -29 0.49 No 18 28.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21966769 - NM_000077 CDKN2A 0 . . . 4.58 80.78 36 6.31 Yes 40 0.82 Yes 0 0 No -26 0.62 No 47 35.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190672631 + NM_000534 PMS1 0 . . . 5.42 71 17 4.72 No 26 1.38 Yes 0 0 No -16 0.45 No 45 67.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68632838 + NM_133509 RAD51B 0 . . . 8.51 90.7 28 5.46 No 21 0.07 No 0 0 No -23 0.63 No 49 75.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68803703 + NM_133509 RAD51B 0 . . . 7.51 82.97 31 5.07 No 8 0.97 Yes 0 0 No -25 0.67 Yes 46 80.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29097337 - NM_001005735 CHEK2 0 . . . 3.19 70.63 18 4.58 No 30 -2.21 No 0 0 No -17 0.83 Yes 43 69.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89645863 + NM_000314 PTEN 0 . . . 2.43 84.19 34 6.42 Yes 58 1.34 Yes 0 0 No -33 0.54 No 47 69.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108133901 + NM_000051 ATM 0 . . . 5 69.96 35 6.24 Yes 25 0.04 No 0 0 No -34 0.54 No 45 52.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7571522 - NM_000546 TP53 0 . . . 4.7 80.47 19 6.08 Yes 41 -2.16 No 0 0 No -34 0.58 No 36 16.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59930677 - NM_032043 BRIP1 0 . . . 14.08 85.16 26 4.04 No 24 1.49 Yes 0 0 No -28 0.8 Yes 50 85.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131955322 + NM_005732 RAD50 0 . . . 7.86 85.99 21 5.16 No 34 0.7 No 0 0 No -20 0.71 Yes 41 53.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23652804 - NM_024675 PALB2 0 . . . 1.19 0 12 4.5 No 12 -0.89 No 0 0 No -24 0.3 No 52 41.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68378045 + NM_133509 RAD51B 0 . . . 0.44 0 53 8.07 Yes 33 0.05 No 0 0 No -24 0.59 No 50 24.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68443231 + NM_133509 RAD51B 0 . . . 3.7 75.37 54 7.96 Yes 55 0.36 No 0 0 No -26 0.78 Yes 13 43.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32972759 + NM_000059 BRCA2 0 . . . 2.59 0 37 7.77 Yes 11 -2.48 No 0 0 No -36 0.69 Yes 47 27.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7573571 - NM_000546 TP53 0 . . . 8.37 77.91 20 7.14 Yes 69 -4.81 No 0 0 No -19 0.76 Yes 49 92.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68357900 + NM_133509 RAD51B 0 . . . 0.97 80.81 19 5.5 No 63 1.42 Yes 0 0 No -19 0.76 Yes 42 65.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131906175 + NM_005732 RAD50 0 . . . 2.56 76.73 29 8.51 Yes 58 0.19 No 0 0 No -28 0.75 Yes 41 60.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68293391 + NM_133509 RAD51B 0 . . . 1.6 76.86 21 5.05 No 62 -4.22 No 0 0 No -20 0.9 Yes 62 19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68710663 + NM_133509 RAD51B 0 . . . 0.2 60.76 34 5.13 No 21 1.5 Yes 0 0 No -33 0.74 Yes 21 64.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108201029 + NM_000051 ATM 0 . . . 0.07 76.88 27 5.18 No 6 0.77 Yes 0 0 No -26 0.75 Yes 39 45.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68817461 + NM_004360 CDH1 0 . . . 8.2 80.45 35 6.08 Yes 13 0.85 Yes 0 0 No -34 0.85 Yes 45 82.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59853173 - NM_032043 BRIP1 0 . . . 8.59 89.5 20 5.1 No 73 -3.55 No 0 0 No -19 0.35 No 48 94.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90952764 - NM_002485 NBN 0 . . . 3.2 79.29 17 5.29 No 34 -0.93 No 0 0 No -21 0.5 No 28 20.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90950145 - NM_002485 NBN 0 . . . 3.13 81.88 44 7.83 Yes 63 -3.73 No 0 0 No -29 0.51 No 48 23.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105200708 + NM_021930 RINT1 0 . . . 1.73 57.74 15 5.15 No 15 0.81 Yes 0 0 No -26 0.83 Yes 43 85.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190707839 + NM_000534 PMS1 0 . . . 6.43 78.66 23 6.4 Yes 10 1.24 Yes 0 0 No -22 0.6 No 48 88.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68568588 + NM_133509 RAD51B 0 . . . 4.34 78.67 22 5.52 No 70 -2.11 No 0 0 No -21 0.62 No 42 65.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1217579 + NM_000455 STK11 0 . . . 2.27 63.1 25 5.2 No 21 -1.27 No 0 0 No -24 0.45 No 37 34.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68504213 + NM_133509 RAD51B 0 . . . 0.32 80.38 28 5.55 No 35 1.72 Yes 0 0 No -24 0.48 No 23 68.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37087435 + NM_000249 MLH1 0 . . . 6.21 82.31 10 7.68 Yes 58 1.02 Yes 0 0 No -39 0.61 No 54 73.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89654669 + NM_000314 PTEN 0 . . . 4.36 60.8 36 4.95 No 0 0.57 No 0 0 No -23 0.7 Yes 38 41.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68734821 + NM_133509 RAD51B 0 . . . 3.38 84.37 22 5.16 No 6 1.73 Yes 0 0 No -21 0.48 No 41 82.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32960950 + NM_000059 BRCA2 0 . . . 3.11 85.59 24 4.47 No 43 -1.03 No 0 0 No -27 0.76 Yes 54 41.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68334286 + NM_133509 RAD51B 0 . . . 4.75 0 17 5.1 No 45 0.62 No 0 0 No -21 0.79 Yes 29 72.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108196979 + NM_000051 ATM 0 . . . 4.37 58.96 16 5.48 No 42 -2.19 No 0 0 No -29 0.39 No 39 91.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47794852 + NM_000251 MSH2 0 . . . 11.61 88.33 15 5.52 No 3 0.26 No 0 0 No -28 0.29 No 40 75.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68789169 + NM_004360 CDH1 0 . . . 0.14 0 23 5.31 No 72 -5.39 No 0 0 No -22 0.77 Yes 38 50.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68343550 + NM_133509 RAD51B 0 . . . 6.9 89.82 14 5.33 No 63 -3.5 No 0 0 No -13 0.62 No 47 42.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59889633 - NM_032043 BRIP1 0 . . . 3.47 90.27 13 4.12 No 3 0.09 No 0 0 No -26 0.8 Yes 52 61.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37056936 + NM_000249 MLH1 0 . . . 5.73 83.35 27 6.86 Yes 26 0.35 No 0 0 No -26 0.77 Yes 32 61.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215662022 - NM_000465 BARD1 0 . . . 5.34 78.86 18 6.56 Yes 41 -2.29 No 0 0 No -17 0.62 No 55 58.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56769168 + NM_058216 RAD51C 0 . . . 1.79 73.54 36 6.85 Yes 25 1.35 Yes 0 0 No -25 0.62 No 33 76.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68880387 + NM_133509 RAD51B 0 . . . 4.34 78.93 17 5.46 No 5 1.65 Yes 0 0 No -24 0.58 No 53 52.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131977125 + NM_005732 RAD50 0 . . . 2.77 80.63 33 5.74 Yes 61 -3.97 No 0 0 No -32 0.65 No 52 54.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68515490 + NM_133509 RAD51B 0 . . . 3.03 61.51 23 3.88 No 70 -3.9 No 0 0 No -22 0.7 Yes 46 69.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52434973 - NM_004656 BAP1 0 . . . 0.5 68.26 16 4.79 No 37 0.42 No 0 0 No -26 0.89 Yes 53 31.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41261795 - NM_007294 BRCA1 0 . . . 4.17 81.94 19 5 No 62 0.97 Yes 0 0 No -21 0.67 Yes 38 82.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68800813 + NM_004360 CDH1 0 . . . 5.79 85.02 19 6.3 Yes 5 1.2 Yes 0 0 No -25 0.58 No 42 71.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94160635 - NM_005591 MRE11 0 . . . 3.4 0 11 5.29 No 7 0.49 No 0 0 No -21 0.56 No 36 68.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41266570 - NM_007294 BRCA1 0 . . . 1.59 62.25 35 6.35 Yes 57 0.8 Yes 0 0 No -33 0.36 No 50 79.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69088741 + NM_133509 RAD51B 0 . . . 4.85 79.1 22 4.54 No 11 0.74 No 0 0 No -52 0.49 No 47 93.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108135339 + NM_000051 ATM 0 . . . 4.77 70.21 16 4.69 No 8 1.63 Yes 0 0 No -15 0.5 No 50 94.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32954357 + NM_000059 BRCA2 0 . . . 3.39 72.85 29 4.75 No 31 0.82 Yes 0 0 No -28 0.55 No 42 49.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68786398 + NM_133509 RAD51B 0 . . . 0.09 0 15 5.39 No 22 0.04 No 0 0 No -54 0.82 Yes 36 85.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47648595 + NM_000251 MSH2 0 . . . 5.75 80.64 20 5.57 Yes 71 0.75 No 0 0 No -28 0.37 No 49 86.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131896680 + NM_005732 RAD50 0 . . . 5 70.46 25 4.86 No 47 1.95 Yes 0 0 No -24 0.95 Yes 38 89.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105189977 + NM_021930 RINT1 0 . . . 6.76 86.37 19 4.58 No 4 0.91 Yes 0 0 No -18 0.8 Yes 54 65.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215592152 - NM_000465 BARD1 0 . . . 0.08 66.87 19 4.55 No 27 0.77 Yes 0 0 No -18 0.91 Yes 43 60.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89665012 + NM_000314 PTEN 0 . . . 8.96 82.83 21 4.19 No 12 0.61 No 0 0 No -27 0.53 No 46 75.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68711211 + NM_133509 RAD51B 0 . . . 6.94 86.36 22 5.73 Yes 68 1.29 Yes 0 0 No -21 0.82 Yes 49 86.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69113345 + NM_133509 RAD51B 0 . . . 2.68 0 29 6.13 Yes 32 0.96 Yes 0 0 No -28 0.95 Yes 41 89.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41258328 - NM_007294 BRCA1 0 . . . 2.25 71.67 44 5.83 Yes 65 0.68 No 0 0 No -22 0.3 No 48 70.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84396552 - NM_139076 FAM175A 0 . . . 2.74 67.83 30 6.86 Yes 26 0.75 No 0 0 No -29 0.97 Yes 40 93.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68493867 + NM_133509 RAD51B 0 . . . 8.24 88.19 11 5.27 No 70 0.2 No 0 0 No -27 0.59 No 39 41.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37076608 + NM_000249 MLH1 0 . . . 2.96 75.27 18 5.29 No 47 0.95 Yes 0 0 No -17 0.59 No 47 94.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29114578 - NM_001005735 CHEK2 0 . . . 2.33 62.53 20 4.9 No 69 0.6 No 0 0 No -19 0.67 Yes 43 56.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59928615 - NM_032043 BRIP1 0 . . . 1.9 64.18 24 7.06 Yes 11 0.44 No 0 0 No -23 0.82 Yes 47 89.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40999159 + NM_001164269 RAD51 0 . . . 5.42 80.33 33 5.83 Yes -4 0.86 Yes 0 0 No -27 0.48 No 47 85.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68835358 + NM_133509 RAD51B 0 . . . 2.51 65.71 54 6.56 Yes 22 0.7 No 0 0 No -31 0.57 No 36 83.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190692374 + NM_000534 PMS1 0 . . . 3.24 75.27 19 5.09 No 63 1.03 Yes 0 0 No -24 0.84 Yes 41 56.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47761679 + NM_000251 MSH2 0 . . . 7.02 72.85 21 6 Yes 14 2.3 Yes 0 0 No -20 0.64 No 44 75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32899122 + NM_000059 BRCA2 0 . . . 1.44 0 41 6.18 Yes 35 0.37 No 0 0 No -39 0.5 No 37 95.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89641064 + NM_000314 PTEN 0 . . . 2.94 63.83 23 5.2 No 61 -3.46 No 0 0 No -55 0.45 No 44 69.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131947706 + NM_005732 RAD50 0 . . . 9.56 88.92 17 4.58 No 5 0.96 Yes 0 0 No -16 0.79 Yes 45 69.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68470256 + NM_133509 RAD51B 0 . . . 7.91 83.02 18 5.74 Yes 49 1.2 Yes 0 0 No -26 0.73 Yes 39 68.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32951698 + NM_000059 BRCA2 0 . . . 2.9 80.22 27 5.52 No 58 -4.06 No 0 0 No -27 0.59 No 47 43.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94193510 - NM_005591 MRE11 0 . . . 0.35 70.04 24 6.31 Yes 61 -4.98 No 0 0 No -23 0.6 No 44 67.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33429502 - NM_002878 RAD51D 0 . . . 1.08 68.74 32 7.78 Yes 5 0.53 No 0 0 No -31 0.81 Yes 53 21.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68867800 + NM_133509 RAD51B 0 . . . 0.21 75.79 24 5.48 No 21 0.99 Yes 0 0 No -23 0.9 Yes 37 85.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68556054 + NM_133509 RAD51B 0 . . . 2.46 67 27 5.74 Yes 54 1.69 Yes 0 0 No -26 0.62 No 37 47.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68377573 + NM_133509 RAD51B 0 . . . 3.17 80.6 17 6.93 Yes 41 0.42 No 0 0 No -29 0.45 No 17 70.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23624912 - NM_024675 PALB2 0 . . . 0.16 68.34 24 6.14 Yes 69 0.72 No 0 0 No -23 0.69 Yes 23 24.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41001958 + NM_001164269 RAD51 0 . . . 2.17 69.38 27 5.2 No 29 0.7 No 0 0 No -26 0.78 Yes 49 75.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68868331 + NM_004360 CDH1 0 . . . 2.59 70.16 26 5.23 No 55 0.84 Yes 0 0 No -30 0.63 No 20 72.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68422540 + NM_133509 RAD51B 0 . . . 0.41 67.87 13 4.28 No 10 0.69 No 0 0 No -56 0.45 No 48 79.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89665818 + NM_000314 PTEN 0 . . . 3.12 84.23 23 8.73 Yes 49 0.15 No 0 0 No -22 0.52 No 47 82.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68777855 + NM_133509 RAD51B 0 . . . 1.97 0 22 5.77 Yes 70 -5.8 No 0 0 No -21 0.34 No 55 40.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108204962 + NM_000051 ATM 0 . . . 4.21 83.17 19 4.9 No 3 0.15 No 0 0 No -18 0.6 No 47 82.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108167784 + NM_000051 ATM 0 . . . 1.85 69.09 29 5.63 Yes 12 1.26 Yes 0 0 No -59 0.44 No 50 63.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37060196 + NM_000249 MLH1 0 . . . 2.67 70.15 55 7.6 Yes 16 0.47 No 0 0 No -30 0.37 No 37 76.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56793132 + NM_058216 RAD51C 0 . . . 1.14 69.75 22 4.53 No 70 1.15 Yes 0 0 No -21 0.38 No 49 76.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29106023 - NM_001005735 CHEK2 0 . . . 3.87 68.2 23 4.9 No 41 0.92 Yes 0 0 No -22 0.73 Yes 17 78.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68883239 + NM_133509 RAD51B 0 . . . 3.73 75.82 12 4.69 No 54 0.31 No 0 0 No -55 0.27 No 47 21.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59864964 - NM_032043 BRIP1 0 . . . 5.22 87.21 32 5.83 Yes 48 -1.87 No 0 0 No -22 0.44 No 48 50.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68862397 + NM_133509 RAD51B 0 . . . 6.54 85.37 20 4.13 No 45 -3.36 No 0 0 No -19 0.43 No 46 90.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32944694 + NM_000059 BRCA2 0 . . . 1.74 84.32 23 4.84 No 61 0.38 No 0 0 No -22 0.82 Yes 50 75.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69011059 + NM_133509 RAD51B 0 . . . 2.67 76.98 21 5.2 No 13 1.78 Yes 0 0 No -20 0.71 Yes 45 66.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69044279 + NM_133509 RAD51B 0 . . . 0.88 69.58 23 6.73 Yes 54 0.81 Yes 0 0 No -22 0.46 No 50 84.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37089790 + NM_000249 MLH1 0 . . . 5.37 68.58 38 6.43 Yes 12 0.86 Yes 0 0 No -25 0.8 Yes 16 57.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33429137 - NM_002878 RAD51D 0 . . . 0.18 0 18 4.59 No 23 1.01 Yes 0 0 No -27 0.43 No 35 47.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68981086 + NM_133509 RAD51B 0 . . . 2.24 76.16 27 5.35 No 50 -3.89 No 0 0 No -26 0.56 No 43 79.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59761447 - NM_032043 BRIP1 0 . . . 5.78 83.42 29 5.46 No 60 0.11 No 0 0 No -25 0.7 Yes 49 76.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94196625 - NM_005591 MRE11 0 . . . 4.05 83.46 37 6.08 Yes 75 -1.87 No 0 0 No -30 0.87 Yes 41 49.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68512921 + NM_133509 RAD51B 0 . . . 3.8 76.09 36 5.17 No 38 1.45 Yes 0 0 No -38 0.56 No 44 69.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69047844 + NM_133509 RAD51B 0 . . . 3.44 73.02 30 6.4 Yes 72 0.85 Yes 0 0 No -29 0.9 Yes 49 54.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68591880 + NM_133509 RAD51B 0 . . . 3.98 63.48 18 4.36 No 65 -5.62 No 0 0 No -17 0.6 No 47 69.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68807274 + NM_133509 RAD51B 0 . . . 3.54 78.15 24 5.38 No 2 0.21 No 0 0 No -48 0.39 No 28 86.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68344498 + NM_133509 RAD51B 0 . . . 1.49 75.79 56 6.36 Yes 33 1.28 Yes 0 0 No -43 0.66 No 50 50.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68656104 + NM_133509 RAD51B 0 . . . 5.4 86.62 17 6.49 Yes 6 0.86 Yes 0 0 No -24 0.45 No 52 89.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1217853 + NM_000455 STK11 0 . . . 2.23 0 16 5.2 No 51 1.56 Yes 0 0 No -24 0.82 Yes 48 58.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29130933 - NM_001005735 CHEK2 0 . . . 2.15 81.94 22 4.9 No 31 1.09 Yes 0 0 No -21 0.84 Yes 27 71.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68543222 + NM_133509 RAD51B 0 . . . 6.26 78.3 29 3.81 No 61 0.17 No 0 0 No -28 0.45 No 43 49.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68945218 + NM_133509 RAD51B 0 . . . 1.38 75.4 26 4.84 No 71 -6.65 No 0 0 No -25 0.73 Yes 51 65.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105191320 + NM_021930 RINT1 0 . . . 2.13 85.37 14 6.12 Yes 33 0.49 No 0 0 No -28 0.68 Yes 50 47.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32917962 + NM_000059 BRCA2 0 . . . 2.53 67.23 17 4.8 No 41 0.86 Yes 0 0 No -22 0.64 No 45 82.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59925573 - NM_032043 BRIP1 0 . . . 3.07 71.49 21 4.58 No 9 0.47 No 0 0 No -53 0.34 No 41 62.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47759363 + NM_000251 MSH2 0 . . . 2.64 61.92 24 7.28 Yes 65 -5.92 No 0 0 No -28 0.6 No 48 21.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190651529 + NM_000534 PMS1 0 . . . 0.09 74.68 13 5 No 4 0.41 No 0 0 No -46 0.56 No 54 81.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48006639 + NM_000179 MSH6 0 . . . 2.06 75.58 33 5.78 Yes 61 -4.16 No 0 0 No -32 0.77 Yes 45 53.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68456736 + NM_133509 RAD51B 0 . . . 3.84 88.76 23 5.41 No 18 1.43 Yes 0 0 No -27 0.37 No 40 73.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59788235 - NM_032043 BRIP1 0 . . . 1.83 79.69 9 3.87 No 7 1.02 Yes 0 0 No -28 0.56 No 51 82.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68614265 + NM_133509 RAD51B 0 . . . 5.98 69.75 17 3.61 No 26 1.47 Yes 0 0 No -20 0.89 Yes 48 72.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68528188 + NM_133509 RAD51B 0 . . . 3.36 69.74 23 5.04 No 41 1.01 Yes 0 0 No -28 0.55 No 17 61.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59814194 - NM_032043 BRIP1 0 . . . 5.12 79.35 35 6.37 Yes 31 0.77 Yes 0 0 No -34 0.48 No 43 92.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94181854 - NM_005591 MRE11 0 . . . 6.01 82 25 3.89 No 18 -1.53 No 0 0 No -19 0.76 Yes 32 78.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56805808 + NM_058216 RAD51C 0 . . . 0.76 0 17 3.55 No 7 1.3 Yes 0 0 No -47 0.89 Yes 8 16.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68817534 + NM_133509 RAD51B 0 . . . 7.64 75.01 53 7.36 Yes 65 1.97 Yes 0 0 No -25 0.57 No 50 69.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68840424 + NM_133509 RAD51B 0 . . . 1.54 70.91 24 4.64 No -2 0.01 No 0 0 No -26 0.73 Yes 41 22.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68916111 + NM_133509 RAD51B 0 . . . 1.86 0 34 5.74 Yes 57 1.92 Yes 0 0 No -19 0.64 No 48 37.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75512432 - NM_001040108 MLH3 0 . . . 0.79 64.57 27 6.21 Yes 73 -5.63 No 0 0 No -26 0.33 No 48 73.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69063924 + NM_133509 RAD51B 0 . . . 5.44 83.29 41 7.45 Yes 57 0.02 No 0 0 No -40 0.5 No 41 59.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41258736 - NM_007294 BRCA1 0 . . . 2.29 0 14 5.2 No 73 1.16 Yes 0 0 No -26 0.68 Yes 45 86.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33429949 - NM_002878 RAD51D 0 . . . 4.34 64.07 30 6.44 Yes 55 1.38 Yes 0 0 No -29 0.51 No 30 60.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47805803 + NM_000251 MSH2 0 . . . 3.89 74.83 18 4.48 No 16 0.89 Yes 0 0 No -17 0.85 Yes 42 65.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47775298 + NM_000251 MSH2 0 . . . 0.8 0 24 5.89 Yes 22 0.97 Yes 0 0 No -34 0.48 No 50 54.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21984723 - NM_000077 CDKN2A 0 . . . 2.84 59.74 20 4.79 No 25 -2.83 No 0 0 No -22 0.59 No 13 44.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90965707 - NM_002485 NBN 0 . . . 0.39 65.48 22 6.04 Yes 37 1.21 Yes 0 0 No -21 0.59 No 43 53.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33442694 - NM_002878 RAD51D 0 . . . 3.8 75.18 28 5.83 Yes 34 1.05 Yes 0 0 No -27 0.88 Yes 24 66.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68832100 + NM_133509 RAD51B 0 . . . 5.48 75.83 18 4.67 No 12 1.1 Yes 0 0 No -20 0.46 No 46 96.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68781877 + NM_004360 CDH1 0 . . . 0.42 74.73 28 5.48 No 33 1.16 Yes 0 0 No -27 0.67 Yes 12 58.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68719029 + NM_133509 RAD51B 0 . . . 6.13 81.24 16 4.69 No 61 1.26 Yes 0 0 No -34 0.86 Yes 30 89.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68544072 + NM_133509 RAD51B 0 . . . 5.19 87.3 13 5.19 No 67 -4.55 No 0 0 No -53 0.48 No 49 73.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68434493 + NM_133509 RAD51B 0 . . . 8.07 79.6 24 4.55 No 22 -1.83 No 0 0 No -23 0.72 Yes 50 86.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47722340 + NM_000251 MSH2 0 . . . 4.85 0 9 5.24 No 53 -1.96 No 0 0 No -26 0.35 No 50 63.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68536347 + NM_133509 RAD51B 0 . . . 6.83 79.16 36 5.25 No 1 1.12 Yes 0 0 No -35 0.67 Yes 49 66.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68904742 + NM_133509 RAD51B 0 . . . 1.42 65.1 18 4.79 No 10 1.08 Yes 0 0 No -20 0.36 No 48 34.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23614194 - NM_024675 PALB2 0 . . . 3.27 70.88 24 5.29 No 23 1.24 Yes 0 0 No -24 0.58 No 46 71.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108148480 + NM_000051 ATM 0 . . . 0.09 75.15 17 6.2 Yes 53 1.31 Yes 0 0 No -16 0.51 No 52 40.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75519939 - NM_001040108 MLH3 0 . . . 2.2 71.11 17 4.6 No 68 -5.18 No 0 0 No -20 0.75 Yes 49 22.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68300737 + NM_133509 RAD51B 0 . . . 3.4 74.17 23 6.56 Yes 73 0.73 No 0 0 No -44 0.91 Yes 42 90.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90965243 - NM_002485 NBN 0 . . . 3.13 75.36 18 3.95 No 63 -4.98 No 0 0 No -26 0.57 No 50 70.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68764231 + NM_133509 RAD51B 0 . . . 2.84 73.03 11 5.2 No 64 -4.39 No 0 0 No -22 0.35 No 46 69.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68297775 + NM_133509 RAD51B 0 . . . 5.57 85.02 24 4.75 No 5 0.63 No 0 0 No -24 0.4 No 42 70.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59761118 - NM_032043 BRIP1 0 . . . 3.74 76.72 17 4.8 No 9 1.1 Yes 0 0 No -16 0.58 No 43 58.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47716173 + NM_000251 MSH2 0 . . . 1.98 74.96 18 4.9 No NA NA NA 0 0 No -17 0.36 No 47 82.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105210027 + NM_021930 RINT1 0 . . . 2.6 80.46 30 5.61 Yes 15 0.36 No 0 0 No -29 0.94 Yes 43 74.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75488071 - NM_001040108 MLH3 0 . . . 3.9 70.52 39 6.5 Yes 54 -2.53 No 0 0 No -38 0.67 Yes 46 45.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56788749 + NM_058216 RAD51C 0 . . . 1.28 0 13 6.1 Yes 45 -4.49 No 0 0 No -22 0.47 No 39 40.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68546371 + NM_133509 RAD51B 0 . . . 2.2 75.14 25 5.55 No 29 0.9 Yes 0 0 No -25 0.32 No 29 68.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37066410 + NM_000249 MLH1 0 . . . 3.15 75.99 20 4.69 No 31 0.66 No 0 0 No -41 0.4 No 47 60.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21995602 - NM_000077 CDKN2A 0 . . . 9.01 85.29 28 3.81 No 68 2.53 Yes 0 0 No -27 0.92 Yes 49 51.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48017443 + NM_000179 MSH6 0 . . . 4.37 69.48 27 4.36 No 73 -2.95 No 0 0 No -26 0.93 Yes 53 46.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41255266 - NM_007294 BRCA1 0 . . . 5.92 82.31 9 4.58 No 58 1.04 Yes 0 0 No -53 0.81 Yes 55 48.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108135126 + NM_000051 ATM 0 . . . 5.5 72.9 28 5.66 Yes 64 -4.85 No 0 0 No -29 0.39 No 45 25.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59879708 - NM_032043 BRIP1 0 . . . 0.05 0 19 4.8 No 15 0.88 Yes 0 0 No -18 0.45 No 38 45.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215643354 - NM_000465 BARD1 0 . . . 4.46 72.53 22 5.1 No 74 0.41 No 0 0 No -22 0.64 No 41 75.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45798234 - NM_001048171 MUTYH 0 . . . 0.99 0 21 5.57 Yes -3 -0.08 No 0 0 No -20 0.75 Yes 34 40.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59757380 - NM_032043 BRIP1 0 . . . 3.26 75.99 20 4.13 No 2 -2.04 No 0 0 No -23 0.71 Yes 40 76.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59883839 - NM_032043 BRIP1 0 . . . 2.87 0 17 5.36 No 12 0.01 No 0 0 No -25 0.4 No 46 79.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23625690 - NM_024675 PALB2 0 . . . 6.42 80.53 15 5 No 1 0.03 No 0 0 No -44 0.67 Yes 45 58.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40998217 + NM_001164269 RAD51 0 . . . 3.33 73.33 21 5.04 No 21 0.72 No 0 0 No -20 0.41 No 43 40.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48030689 + NM_000179 MSH6 0 . . . 1.66 70.16 21 3.79 No 57 1 Yes 0 0 No -20 0.55 No 48 51.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32939325 + NM_000059 BRCA2 0 . . . 5.91 90.65 50 7.3 Yes 26 0.22 No 0 0 No -25 0.66 No 42 75.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68479740 + NM_133509 RAD51B 0 . . . 4.68 85.9 27 5.65 Yes 41 0.88 Yes 0 0 No -26 0.41 No 49 58.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90951815 - NM_002485 NBN 0 . . . 10.57 90.16 64 7.32 Yes 74 -3.48 No 0 0 No -32 0.39 No 43 90.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89685934 + NM_000314 PTEN 0 . . . 3.42 79.72 26 7.08 Yes 7 1.02 Yes 0 0 No -25 0.82 Yes 50 80.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152371530 - NM_005431 XRCC2 0 . . . 2.27 80.12 48 5.35 No 7 1.62 Yes 0 0 No -34 0.54 No 51 86.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29084198 - NM_001005735 CHEK2 0 . . . 1 78.69 31 5.85 Yes 19 0.13 No 0 0 No -30 0.67 Yes 44 53.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68655407 + NM_133509 RAD51B 0 . . . 5.95 78.7 37 4.78 No 58 1.83 Yes 0 0 No -27 0.47 No 42 71.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68787087 + NM_004360 CDH1 0 . . . 0.94 76.63 21 4.33 No 40 -2.99 No 0 0 No -23 0.72 Yes 48 77.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68526560 + NM_133509 RAD51B 0 . . . 4.88 73.59 16 5.18 No 2 0.26 No 0 0 No -21 0.56 No 32 60.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32904014 + NM_000059 BRCA2 0 . . . 1.08 65.81 35 5.83 Yes 41 0.76 No 0 0 No -34 0.75 Yes 47 38.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32905399 + NM_000059 BRCA2 0 . . . 1.34 74.73 23 4.69 No 56 -2.15 No 0 0 No -44 0.45 No 42 45.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1206280 + NM_000455 STK11 0 . . . 2.77 69.23 22 4.03 No 33 -0.79 No 0 0 No -38 0.65 No 25 33.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68889604 + NM_133509 RAD51B 0 . . . 4.58 69.98 20 4.73 No 27 2.19 Yes 0 0 No -19 0.81 Yes 42 62.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68861254 + NM_004360 CDH1 0 . . . 0.65 59.03 37 5.11 No 69 -5.02 No 0 0 No -29 0.38 No 46 35.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84385018 - NM_139076 FAM175A 0 . . . 8.1 84.58 12 8.69 Yes 18 0.02 No 0 0 No -28 0.52 No 40 58.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69064927 + NM_133509 RAD51B 0 . . . 4.05 74.76 19 4.9 No 43 1.23 Yes 0 0 No -45 0.3 No 44 66.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68998790 + NM_133509 RAD51B 0 . . . 2.53 74.66 32 5.35 No -3 0.14 No 0 0 No -24 0.78 Yes 44 59.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69126532 + NM_133509 RAD51B 0 . . . 0.48 63.82 20 7.1 Yes 3 -1.31 No 0 0 No -30 0.63 No 55 34.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131979638 + NM_005732 RAD50 0 . . . 2.96 69.49 35 6.89 Yes 74 0.26 No 0 0 No -34 0.88 Yes 44 73.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69123620 + NM_133509 RAD51B 0 . . . 1.05 0 23 5.29 No 63 0.59 No 0 0 No -22 0.9 Yes 48 59.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1204154 + NM_000455 STK11 0 . . . 3.6 85.02 19 4.9 No 9 1.17 Yes 0 0 No -19 0.47 No 49 89.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29127500 - NM_001005735 CHEK2 0 . . . 1.11 68.95 100 6.66 Yes 59 1.45 Yes 0 0 No -25 0.84 Yes 42 92.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94178167 - NM_005591 MRE11 0 . . . 6.4 81.64 16 4.69 No 7 0.77 Yes 0 0 No -23 0.35 No 36 67.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41012492 + NM_001164269 RAD51 0 . . . 2.31 80.34 19 5 No 67 1.24 Yes 0 0 No -55 0.84 Yes 16 52.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131933697 + NM_005732 RAD50 0 . . . 2.26 62.13 19 4.41 No 68 -3 No 0 0 No -22 0.59 No 48 54.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1226918 + NM_000455 STK11 0 . . . 6.05 81.12 29 5.57 Yes 38 -1.84 No 0 0 No -28 0.46 No 30 51.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68548173 + NM_133509 RAD51B 0 . . . 1.36 75.87 26 5.66 Yes 8 0.4 No 0 0 No -25 0.87 Yes 50 51.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68906621 + NM_133509 RAD51B 0 . . . 4.34 70.32 16 4.69 No 44 -1.37 No 0 0 No -35 0.9 Yes 45 39.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41210487 - NM_007294 BRCA1 0 . . . 0.68 61.31 20 4.47 No 22 0.05 No 0 0 No -19 0.78 Yes 43 60.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37041447 + NM_000249 MLH1 0 . . . 2.23 77.95 26 6.56 Yes 44 0.51 No 0 0 No -25 0.87 Yes 14 80.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68628282 + NM_133509 RAD51B 0 . . . 7.13 85.93 24 5.36 No 59 0.83 Yes 0 0 No -36 0.54 No 48 58.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68909183 + NM_133509 RAD51B 0 . . . 2.58 0 24 4.8 No 64 0.76 No 0 0 No -53 0.92 Yes 28 73.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47777352 + NM_000251 MSH2 0 . . . 0.69 72.63 16 5.48 No 11 1.06 Yes 0 0 No -25 0.48 No 46 53.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56802375 + NM_058216 RAD51C 0 . . . 0.39 65.38 43 6.89 Yes 61 0.83 Yes 0 0 No -42 0.58 No 43 26.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152357324 - NM_005431 XRCC2 0 . . . 0.97 0 12 4.9 No 64 0.65 No 0 0 No -14 0.19 No 53 52.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75490062 - NM_001040108 MLH3 0 . . . 0.22 61.39 21 4.58 No 63 1.13 Yes 0 0 No -20 0.85 Yes 18 36.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68308186 + NM_133509 RAD51B 0 . . . 0.15 72.14 20 5.18 No 66 0.73 No 0 0 No -56 0.64 No 40 74.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47642849 + NM_000251 MSH2 0 . . . 0.75 77.46 44 6.46 Yes 37 1.47 Yes 0 0 No -41 0.78 Yes 21 79.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68913560 + NM_133509 RAD51B 0 . . . 2.86 80.23 43 5.95 Yes -3 0.86 Yes 0 0 No -38 0.67 Yes 45 87.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89707936 + NM_000314 PTEN 0 . . . 1.54 66.52 34 6.92 Yes 31 0.72 No 0 0 No -33 0.77 Yes 34 76.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21989550 - NM_000077 CDKN2A 0 . . . 3.25 0 32 5.41 No 16 0.92 Yes 0 0 No -20 0.53 No 42 81.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90981646 - NM_002485 NBN 0 . . . 2.36 64.47 13 4.75 No 11 0.61 No 0 0 No -23 0.5 No 40 42.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68293154 + NM_133509 RAD51B 0 . . . 4.8 74.44 17 4.79 No 47 0.47 No 0 0 No -21 0.68 Yes 45 78.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108147860 + NM_000051 ATM 0 . . . 3.33 72.79 26 4.44 No 72 -0.4 No 0 0 No -25 0.48 No 35 92.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47742430 + NM_000251 MSH2 0 . . . 5.29 72.49 24 4.84 No 55 1.02 Yes 0 0 No -18 0.41 No 47 89.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68526634 + NM_133509 RAD51B 0 . . . 7.76 86.98 13 4.8 No 76 0.28 No 0 0 No -19 0.82 Yes 43 71.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75518407 - NM_001040108 MLH3 0 . . . 0.28 55.12 18 7.07 Yes 64 0.36 No 0 0 No -36 0.34 No 37 53.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215633752 - NM_000465 BARD1 0 . . . 4.11 87.09 32 5.74 Yes 44 0.56 No 0 0 No -37 0.71 Yes 40 70.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47676986 + NM_000251 MSH2 0 . . . 6.59 87.16 16 5.1 No 5 0.31 No 0 0 No -31 0.37 No 31 73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68849841 + NM_133509 RAD51B 0 . . . 5.89 83.95 18 4.89 No 51 0.58 No 0 0 No -27 0.27 No 47 72.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105178624 + NM_021930 RINT1 0 . . . 1.18 74.96 28 5.2 No 69 0.69 No 0 0 No -27 0.64 No 51 82.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69137747 + NM_133509 RAD51B 0 . . . 3.59 69.95 27 6.61 Yes 29 0.92 Yes 0 0 No -26 0.76 Yes 35 61.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23614410 - NM_024675 PALB2 0 . . . 3.85 80.22 21 7.72 Yes 24 -3.21 No 0 0 No -23 0.4 No 54 66.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68592030 + NM_133509 RAD51B 0 . . . 6.09 83.86 17 3.89 No 15 1.01 Yes 0 0 No -22 0.85 Yes 23 66.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68521977 + NM_133509 RAD51B 0 . . . 4.15 72.93 18 4.69 No 39 1.19 Yes 0 0 No -17 0.84 Yes 37 71.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37066285 + NM_000249 MLH1 0 . . . 5.44 70.92 14 4.36 No 60 1.47 Yes 0 0 No -23 0.44 No 41 89.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59787902 - NM_032043 BRIP1 0 . . . 1.18 66.6 29 7.34 Yes 39 0.13 No 0 0 No -28 0.57 No 36 60.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68416337 + NM_133509 RAD51B 0 . . . 3.86 73.06 23 5.2 No 7 1.36 Yes 0 0 No -23 0.55 No 36 75.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7587763 - NM_000546 TP53 0 . . . 6.98 85.65 28 4.62 No 16 1.14 Yes 0 0 No -27 0.49 No 42 60.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900094 + NM_133509 RAD51B 0 . . . 10.32 87.93 25 5.39 No 40 0.07 No 0 0 No -24 0.81 Yes 39 82.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59802330 - NM_032043 BRIP1 0 . . . 2.45 70.24 23 6.4 Yes 74 -6.49 No 0 0 No -28 0.32 No 37 87.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152350974 - NM_005431 XRCC2 0 . . . 5.78 71.53 29 5.52 No 74 0.81 Yes 0 0 No -28 0.72 Yes 46 96.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68959172 + NM_133509 RAD51B 0 . . . 1.55 75.51 30 5.26 No 70 0.58 No 0 0 No -30 0.51 No 45 47.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108109142 + NM_000051 ATM 0 . . . 4.21 70.85 23 5.29 No 55 1.27 Yes 0 0 No -22 0.4 No 40 79.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105200971 + NM_021930 RINT1 0 . . . 0.23 68.7 13 5.2 No 5 -2.24 No 0 0 No -20 0.31 No 49 50.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68864091 + NM_004360 CDH1 0 . . . 6.05 77.73 16 5.83 Yes 1 1.99 Yes 0 0 No -19 0.73 Yes 57 59.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7589834 - NM_000546 TP53 0 . . . 4.97 67.44 18 4.74 No 45 0.22 No 0 0 No -37 0.6 No 34 75.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215647339 - NM_000465 BARD1 0 . . . 5.05 77.2 21 5.2 No 74 1.2 Yes 0 0 No -23 0.66 No 43 95.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41257394 - NM_007294 BRCA1 0 . . . 3.6 66.81 28 5.66 Yes 48 0.2 No 0 0 No -27 0.93 Yes 50 27.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29101980 - NM_001005735 CHEK2 0 . . . 3.86 0 15 4.09 No 69 1.12 Yes 0 0 No -29 0.54 No 33 69.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32967020 + NM_000059 BRCA2 0 . . . 8.18 84.81 19 4.24 No 60 0.36 No 0 0 No -30 0.78 Yes 45 87.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59802573 - NM_032043 BRIP1 0 . . . 7.13 84.46 17 5.04 No 22 1.76 Yes 0 0 No -22 0.5 No 36 93.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68370957 + NM_133509 RAD51B 0 . . . 6.36 77.92 25 4.9 No 55 0.8 Yes 0 0 No -24 0.71 Yes 41 71.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94169534 - NM_005591 MRE11 0 . . . 1.35 71.15 20 4.59 No 63 -4.81 No 0 0 No -20 0.37 No 47 61.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59761173 - NM_032043 BRIP1 0 . . . 5.53 79.47 32 7.5 Yes 17 0.56 No 0 0 No -31 0.86 Yes 41 85.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89731260 + NM_000314 PTEN 0 . . . 7.9 76.09 20 5.1 No 18 0.48 No 0 0 No -61 0.49 No 47 60.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29109394 - NM_001005735 CHEK2 0 . . . 0.92 76.63 17 6.08 Yes 55 -3.69 No 0 0 No -16 0.46 No 53 56.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94196718 - NM_005591 MRE11 0 . . . 4.03 90.18 24 5.2 No 49 0.79 Yes 0 0 No -21 0.61 No 46 69.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41237374 - NM_007294 BRCA1 0 . . . 2.61 84.41 18 5.11 No 19 1.2 Yes 0 0 No -28 0.66 No 39 84.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48011811 + NM_000179 MSH6 0 . . . 2 80.34 16 3.95 No 19 -1.91 No 0 0 No -33 0.28 No 42 52.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68985705 + NM_133509 RAD51B 0 . . . 3.8 78.67 15 5.84 Yes 68 -0.39 No 0 0 No -23 0.48 No 46 73.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68607598 + NM_133509 RAD51B 0 . . . 5.04 77.38 34 6.16 Yes 51 0.54 No 0 0 No -33 0.45 No 48 85.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32971863 + NM_000059 BRCA2 0 . . . 8.35 81.27 13 4.95 No 11 1.08 Yes 0 0 No -52 0.69 Yes 47 75.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68825481 + NM_133509 RAD51B 0 . . . 4.15 78.91 11 4.59 No 1 0.5 No 0 0 No -46 0.34 No 51 85.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215598309 - NM_000465 BARD1 0 . . . 4.29 87.72 38 5.65 Yes 53 -3.84 No 0 0 No -37 0.47 No 53 79.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68824322 + NM_004360 CDH1 0 . . . 5.36 76.09 24 5.2 No 47 0.51 No 0 0 No -23 0.88 Yes 49 55.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68484848 + NM_133509 RAD51B 0 . . . 3.52 69.67 106 10.95 Yes 67 1.14 Yes 0 0 No -34 0.58 No 29 71.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108202078 + NM_000051 ATM 0 . . . 3.92 72.66 36 6.78 Yes 16 0.19 No 0 0 No -35 0.67 Yes 38 78.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69032875 + NM_133509 RAD51B 0 . . . 1.24 70.54 24 5.48 No 70 1.22 Yes 0 0 No -23 0.82 Yes 31 59.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68838526 + NM_004360 CDH1 0 . . . 7.71 87.66 23 4.87 No 72 -3.98 No 0 0 No -49 0.71 Yes 39 66.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68449484 + NM_133509 RAD51B 0 . . . 3.8 79.29 21 5.2 No 49 0.67 No 0 0 No -35 0.67 Yes 16 47.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94153485 - NM_005591 MRE11 0 . . . 5.45 79.77 20 5.65 Yes 1 0.04 No 0 0 No -34 0.74 Yes 47 61.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29133504 - NM_001005735 CHEK2 0 . . . 2.39 76.63 20 5.1 No 58 -3.67 No 0 0 No -23 0.63 No 39 40.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108224594 + NM_000051 ATM 0 . . . 0.39 68.11 16 4.58 No 51 0.62 No 0 0 No -14 0.44 No 27 89.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68873760 + NM_133509 RAD51B 0 . . . 3.41 75.18 27 6.17 Yes 49 0.78 Yes 0 0 No -29 0.53 No 39 73.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7569704 - NM_000546 TP53 0 . . . 1.44 65.65 31 6.56 Yes 43 0.67 No 0 0 No -34 0.55 No 15 86.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68975255 + NM_133509 RAD51B 0 . . . 6.43 80.71 35 6.21 Yes 0 0.49 No 0 0 No -22 0.48 No 42 71.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52440575 - NM_004656 BAP1 0 . . . 1.07 75.48 50 6.93 Yes 36 -1.23 No 0 0 No -26 0.83 Yes 26 37.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41258043 - NM_007294 BRCA1 0 . . . 5.6 77.34 17 4.69 No 25 1.41 Yes 0 0 No -60 0.62 No 33 94.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68607469 + NM_133509 RAD51B 0 . . . 2.3 77.12 16 3.62 No 44 0.33 No 0 0 No -25 0.89 Yes 51 53.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59909385 - NM_032043 BRIP1 0 . . . 3.47 0 19 7.06 Yes 13 1.03 Yes 0 0 No -18 0.53 No 45 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94158246 - NM_005591 MRE11 0 . . . 2.82 0 25 5.36 No 13 1.96 Yes 0 0 No -24 0.86 Yes 40 70.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190703001 + NM_000534 PMS1 0 . . . 0.66 56.43 28 5.16 No -4 0.07 No 0 0 No -23 0.8 Yes 45 72.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108218592 + NM_000051 ATM 0 . . . 7.53 95.02 24 4.36 No 3 0.58 No 0 0 No -23 0.79 Yes 47 50.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68435032 + NM_133509 RAD51B 0 . . . 2.38 61 15 4.58 No 29 0.02 No 0 0 No -44 0.49 No 40 88.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48016249 + NM_000179 MSH6 0 . . . 3.66 80.12 26 5.39 No 7 1.16 Yes 0 0 No -26 0.68 Yes 51 87.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68737105 + NM_133509 RAD51B 0 . . . 4.15 81.59 35 5.66 Yes 48 0.62 No 0 0 No -34 0.57 No 47 93.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33446496 - NM_002878 RAD51D 0 . . . 3.44 70.76 28 5.91 Yes 50 -5.01 No 0 0 No -28 0.56 No 18 35.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59788489 - NM_032043 BRIP1 0 . . . 5.31 77.93 40 6.4 Yes 16 0.63 No 0 0 No -39 0.5 No 42 77.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152352650 - NM_005431 XRCC2 0 . . . 2.97 71.97 26 5 No 46 0.87 Yes 0 0 No -25 0.77 Yes 47 36.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215674406 - NM_000465 BARD1 0 . . . 4.53 74.62 15 4.58 No NA NA NA 0 0 No -57 0.6 No 11 16.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37074645 + NM_000249 MLH1 0 . . . 8.93 84.21 25 6.54 Yes 73 -2.31 No 0 0 No -24 0.59 No 41 65.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59800691 - NM_032043 BRIP1 0 . . . 1.11 70.04 21 4.32 No 38 0.61 No 0 0 No -20 0.6 No 47 54.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56771835 + NM_058216 RAD51C 0 . . . 0.55 69.84 21 5.57 Yes 30 0.7 No 0 0 No -24 0.59 No 47 74.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47730777 + NM_000251 MSH2 0 . . . 2.46 71.53 28 4.54 No 56 -1.73 No 0 0 No -27 0.58 No 51 59.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69096862 + NM_133509 RAD51B 0 . . . 0.48 0 22 5.1 No 67 0.11 No 0 0 No -25 0.88 Yes 43 49.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47642395 + NM_000251 MSH2 0 . . . 1.36 82.21 31 5.57 Yes 72 0.15 No 0 0 No -30 0.71 Yes 50 53.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68777618 + NM_133509 RAD51B 0 . . . 6.89 70.73 33 8.74 Yes 37 -2.33 No 0 0 No -32 0.84 Yes 41 57.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68389120 + NM_133509 RAD51B 0 . . . 0.81 0 22 5 No 11 1.05 Yes 0 0 No -21 0.91 Yes 47 82.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68445442 + NM_133509 RAD51B 0 . . . 2.88 74.43 23 7 Yes 63 0.82 Yes 0 0 No -22 0.5 No 26 59.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68457865 + NM_133509 RAD51B 0 . . . 0.45 64.97 15 3.88 No 21 0.89 Yes 0 0 No -15 0.36 No 37 96.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68804581 + NM_004360 CDH1 0 . . . 4.92 65.65 19 4.58 No 33 -2.24 No 0 0 No -18 0.57 No 48 42.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68295683 + NM_133509 RAD51B 0 . . . 4.53 89.61 23 6.03 Yes 36 0.57 No 0 0 No -22 0.77 Yes 36 95.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131905256 + NM_005732 RAD50 0 . . . 2.1 72.64 66 7.12 Yes 5 0.24 No 0 0 No -30 0.79 Yes 40 50.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23618773 - NM_024675 PALB2 0 . . . 0.83 66.79 30 6.26 Yes 65 -2.01 No 0 0 No -33 0.48 No 43 58.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47630834 + NM_000251 MSH2 0 . . . 2.72 86.32 36 6 Yes 17 0.71 No 0 0 No -30 0.48 No 41 78.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29094634 - NM_001005735 CHEK2 0 . . . 7.29 85.21 17 4.45 No 31 0.15 No 0 0 No -42 0.66 Yes 43 51.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89644055 + NM_000314 PTEN 0 . . . 2.7 54.12 25 3.74 No 18 1.18 Yes 0 0 No -24 0.37 No 40 69.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68310221 + NM_133509 RAD51B 0 . . . 4.83 86.06 20 3.94 No 59 0.17 No 0 0 No -19 0.84 Yes 35 65.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59836538 - NM_032043 BRIP1 0 . . . 3.01 79.07 29 6.37 Yes 30 1.45 Yes 0 0 No -28 0.6 No 51 63.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47726850 + NM_000251 MSH2 0 . . . 7.88 87 14 5.06 No 36 2.23 Yes 0 0 No -25 0.39 No 28 95.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89730600 + NM_000314 PTEN 0 . . . 2.71 72.65 28 7.79 Yes 64 1 Yes 0 0 No -27 0.78 Yes 19 36.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68817186 + NM_004360 CDH1 0 . . . 0.1 74.68 49 8.18 Yes 61 0.57 No 0 0 No -30 0.45 No 52 60.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47643769 + NM_000251 MSH2 0 . . . 5.12 69.58 69 5.68 Yes 51 0.67 No 0 0 No -24 0.4 No 41 62.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47653603 + NM_000251 MSH2 0 . . . 3.6 85.02 30 5.82 Yes 4 1.05 Yes 0 0 No -29 0.93 Yes 54 77.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68815065 + NM_004360 CDH1 0 . . . 7.53 84.24 17 4.8 No 46 2.02 Yes 0 0 No -16 0.63 No 41 95.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37075532 + NM_000249 MLH1 0 . . . 2.02 71.12 33 4.63 No 36 0.49 No 0 0 No -24 0.61 No 43 66.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68515291 + NM_133509 RAD51B 0 . . . 6.96 86.96 13 5.57 Yes 32 0.23 No 0 0 No -21 0.68 Yes 51 68.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47705073 + NM_000251 MSH2 0 . . . 7.07 72.53 33 5.5 No NA NA NA 0 0 No -32 0.52 No 62 9.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32889849 + NM_000059 BRCA2 0 . . . 5.67 79.92 19 4.75 No 73 -4.43 No 0 0 No -44 0.62 No 51 60.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131919951 + NM_005732 RAD50 0 . . . 2.86 74.81 33 4.75 No 66 1.06 Yes 0 0 No -35 0.71 Yes 35 97.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21972586 - NM_000077 CDKN2A 0 . . . 6.73 91.48 20 6.08 Yes 16 0.12 No 0 0 No -27 0.58 No 48 35.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68648280 + NM_133509 RAD51B 0 . . . 5.58 88.32 46 6.77 Yes 65 0.86 Yes 0 0 No -33 0.9 Yes 47 61.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59857681 - NM_032043 BRIP1 0 . . . 2.85 86.07 33 6.24 Yes 4 0.39 No 18 0.72 Yes -24 0.51 No 41 68.21 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 108221264 + NM_000051 ATM 0 . . . 2.7 71.16 16 4.69 No 50 -3.48 No 0 0 No -52 0.66 No 43 62.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47770554 + NM_000251 MSH2 0 . . . 7.98 79.7 37 7.25 Yes 53 0.39 No 0 0 No -36 0.96 Yes 44 64.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190725707 + NM_000534 PMS1 0 . . . 0.85 0 24 6.06 Yes 61 0.69 No 0 0 No -23 0.78 Yes 43 59.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84393866 - NM_139076 FAM175A 0 . . . 1.28 79.12 25 5.57 Yes 68 0.79 Yes 0 0 No -24 0.78 Yes 44 33.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48011244 + NM_000179 MSH6 0 . . . 6.23 71.14 24 4.43 No 38 -3.28 No 0 0 No -39 0.36 No 50 45.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131896981 + NM_005732 RAD50 0 . . . 7.72 89.75 25 4.9 No 9 0.63 No 0 0 No -24 0.65 No 49 93.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1204740 + NM_000455 STK11 0 . . . 5.49 84.46 15 4.58 No 46 -2.66 No 0 0 No -22 0.67 Yes 43 43.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7586302 - NM_000546 TP53 0 . . . 2.28 80.22 27 5.04 No 58 -3.85 No 0 0 No -24 0.47 No 43 68.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497449 + NM_133509 RAD51B 0 . . . 8.51 82.83 28 5.44 No 40 0.34 No 0 0 No -27 0.66 No 45 81.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108150275 + NM_000051 ATM 0 . . . 3.49 75.97 11 4.12 No 6 0.81 Yes 0 0 No -29 0.72 Yes 52 74.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47744496 + NM_000251 MSH2 0 . . . 0.08 71.58 18 6.3 Yes 76 0.84 Yes 0 0 No -22 0.75 Yes 43 37.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59938715 - NM_032043 BRIP1 0 . . . 3.17 80.53 16 4.69 No 7 0.81 Yes 0 0 No -42 0.89 Yes 39 59.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47695826 + NM_000251 MSH2 0 . . . 4.93 74.15 31 6.3 Yes 27 1.87 Yes 0 0 No -23 0.72 Yes 31 52.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59874473 - NM_032043 BRIP1 0 . . . 3.75 0 24 5.98 Yes 20 1.5 Yes 0 0 No -23 0.79 Yes 51 67.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47773261 + NM_000251 MSH2 0 . . . 2.26 0 23 5.29 No 29 1.72 Yes 0 0 No -22 0.58 No 29 85.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59835194 - NM_032043 BRIP1 0 . . . 5.49 87.64 13 3.54 No 62 0.87 Yes 0 0 No -23 0.4 No 47 80.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68792093 + NM_133509 RAD51B 0 . . . 0.31 0 21 8.34 Yes -1 0.15 No 0 0 No -20 0.83 Yes 59 18.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21990872 - NM_000077 CDKN2A 0 . . . 5.8 93.74 18 4.9 No 5 0.65 No 0 0 No -51 0.77 Yes 49 84.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68330521 + NM_133509 RAD51B 0 . . . 2.53 61.88 16 4.27 No 63 0.5 No 0 0 No -18 0.69 Yes 33 39.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59791436 - NM_032043 BRIP1 0 . . . 1.55 75.37 46 8.16 Yes 73 1.86 Yes 0 0 No -46 0.4 No 50 74.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68631248 + NM_133509 RAD51B 0 . . . 5.64 67.92 31 5.13 No 8 1.41 Yes 0 0 No -25 0.64 No 40 54.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7576825 - NM_000546 TP53 0 . . . 0.17 67.56 52 7.04 Yes 10 0.53 No 0 0 No -17 0.71 Yes 48 85.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68661876 + NM_133509 RAD51B 0 . . . 3.53 84.77 47 4.27 No 17 -2.14 No 0 0 No -21 0.79 Yes 46 49.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89664557 + NM_000314 PTEN 0 . . . 3.35 78.47 27 5.66 Yes 51 0.32 No 0 0 No -26 0.86 Yes 15 42.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215636368 - NM_000465 BARD1 0 . . . 2.31 68.95 20 5.83 Yes 16 0.98 Yes 0 0 No -19 0.44 No 42 89.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215617746 - NM_000465 BARD1 0 . . . 1.55 74.71 23 5 No 67 0.87 Yes 0 0 No -22 0.85 Yes 44 75.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68647585 + NM_133509 RAD51B 0 . . . 1.65 66.31 39 7.5 Yes 70 -3.15 No 0 0 No -38 0.61 No 47 27.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68534754 + NM_133509 RAD51B 0 . . . 2.62 80.41 16 4.01 No 12 0.47 No 0 0 No -18 0.49 No 51 50.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68648359 + NM_133509 RAD51B 0 . . . 4.34 0 27 5.73 Yes 69 1.02 Yes 0 0 No -26 0.47 No 48 66.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59892428 - NM_032043 BRIP1 0 . . . 0.49 58.48 18 4.38 No 59 0.08 No 0 0 No -17 0.45 No 43 74.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190676746 + NM_000534 PMS1 0 . . . 6.17 82.7 10 3.87 No 62 1.49 Yes 0 0 No -30 0.61 No 47 43.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68828467 + NM_004360 CDH1 0 . . . 5.65 80.22 40 7.55 Yes 2 0.75 No 0 0 No -39 0.79 Yes 42 32.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59844019 - NM_032043 BRIP1 0 . . . 8.1 80.49 29 5.14 No -3 1.13 Yes 0 0 No -28 0.58 No 48 29.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68388742 + NM_133509 RAD51B 0 . . . 9.83 91.75 26 5.7 Yes 54 0.87 Yes 0 0 No -30 0.8 Yes 46 62.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131945160 + NM_005732 RAD50 0 . . . 0.55 70.94 18 4.77 No 22 0.93 Yes 0 0 No -23 0.91 Yes 27 89.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84387890 - NM_139076 FAM175A 0 . . . 2.31 71.02 24 5.39 No 61 -3.84 No 0 0 No -24 0.55 No 49 27.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1229451 + NM_000455 STK11 0 . . . 0.21 64.16 26 5.65 Yes 69 -3.98 No 0 0 No -25 0.78 Yes 61 19.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68490075 + NM_133509 RAD51B 0 . . . 1.43 83.78 27 6.24 Yes 31 0.69 No 0 0 No -22 0.46 No 27 66.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41240109 - NM_007294 BRCA1 0 . . . 8.5 82.86 35 6.39 Yes 58 0.63 No 0 0 No -34 0.78 Yes 31 46.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68672598 + NM_133509 RAD51B 0 . . . 2.4 69.76 21 5 No 56 0.45 No 0 0 No -18 0.7 Yes 38 38.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68416587 + NM_133509 RAD51B 0 . . . 0.75 79.71 20 5.65 Yes 28 1.04 Yes 0 0 No -25 0.53 No 23 65.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68728796 + NM_133509 RAD51B 0 . . . 4.27 80.36 34 7.68 Yes 6 0.27 No 0 0 No -33 0.63 No 52 55.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59939022 - NM_032043 BRIP1 0 . . . 6.17 86.68 18 5.91 Yes 60 0.34 No 0 0 No -31 0.37 No 38 67.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108212141 + NM_000051 ATM 0 . . . 5.95 66.96 24 5.2 No 64 1.14 Yes 0 0 No -23 0.72 Yes 41 81.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59863313 - NM_032043 BRIP1 0 . . . 5.99 75.99 67 6.23 Yes 16 1.38 Yes 0 0 No -26 0.72 Yes 42 93.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68754479 + NM_133509 RAD51B 0 . . . 2.14 70.88 25 5.64 Yes 61 0.76 No 0 0 No -21 0.41 No 53 54.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89719981 + NM_000314 PTEN 0 . . . 4.83 84.03 35 5.62 Yes 14 0.66 No 0 0 No -34 0.75 Yes 41 88.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47786075 + NM_000251 MSH2 0 . . . 5.57 83.26 48 6.93 Yes 26 0.16 No 0 0 No -47 0.53 No 51 75.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215668164 - NM_000465 BARD1 0 . . . 6.5 76.08 16 7.88 Yes 13 0.87 Yes 0 0 No -24 0.55 No 45 87.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48020346 + NM_000179 MSH6 0 . . . 0.1 74.68 49 8.24 Yes 53 0.43 No 0 0 No -24 0.37 No 52 64.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23622917 - NM_024675 PALB2 0 . . . 6.14 69.9 16 4.84 No 46 0.65 No 0 0 No -24 0.69 Yes 43 66.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23615870 - NM_024675 PALB2 0 . . . 6.42 79.91 29 7.68 Yes 57 1.14 Yes 0 0 No -28 0.93 Yes 54 69.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68301073 + NM_133509 RAD51B 0 . . . 0.27 75.04 63 8.08 Yes 65 0.41 No 0 0 No -31 0.76 Yes 50 37.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47725276 + NM_000251 MSH2 0 . . . 3.96 78.2 14 3.87 No 10 1.9 Yes 0 0 No -26 0.59 No 48 93.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29133874 - NM_001005735 CHEK2 0 . . . 1.6 60.76 33 6.63 Yes 52 -1.67 No 0 0 No -31 0.4 No 48 34.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21970136 - NM_000077 CDKN2A 0 . . . 7.41 80.33 21 4.34 No 46 0.56 No 0 0 No -20 0.7 Yes 44 50.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59871059 - NM_032043 BRIP1 0 . . . 4.62 73.59 20 5.15 No 45 1.09 Yes 24 0.4 Yes -57 0.41 No 13 59.03 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 75481442 - NM_001040108 MLH3 0 . . . 0.45 77.43 38 6.08 Yes 15 1.18 Yes 0 0 No -30 0.55 No 43 61.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68751764 + NM_133509 RAD51B 0 . . . 10.6 86.14 51 7.6 Yes 64 2.87 Yes 0 0 No -38 0.45 No 33 87.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68811565 + NM_004360 CDH1 0 . . . 3.2 81.8 16 4.69 No 8 0.73 No 0 0 No -22 0.86 Yes 50 81.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68399350 + NM_133509 RAD51B 0 . . . 0.51 61.32 22 4.9 No 31 0.03 No 0 0 No -21 0.9 Yes 38 95.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68924998 + NM_133509 RAD51B 0 . . . 2.59 71.47 29 3.99 No 64 -4.12 No 0 0 No -24 0.79 Yes 47 56.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21977742 - NM_000077 CDKN2A 0 . . . 2.89 83.04 21 5.57 Yes 65 0.91 Yes 0 0 No -20 0.67 Yes 39 43.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68468177 + NM_133509 RAD51B 0 . . . 4.22 66.82 27 6.92 Yes 22 0.37 No 0 0 No -26 0.94 Yes 30 27.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220376 - NM_007294 BRCA1 0 . . . 5.68 75.72 22 4.86 No 8 0.26 No 0 0 No -21 0.86 Yes 47 59.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48022035 + NM_000179 MSH6 0 . . . 2.43 65.88 17 4.74 No 16 1.1 Yes 0 0 No -21 0.54 No 42 92.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68740898 + NM_133509 RAD51B 0 . . . 1.43 62.8 22 5.15 No 67 1.35 Yes 0 0 No -21 0.63 No 44 57.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69083083 + NM_133509 RAD51B 0 . . . 3.06 72.86 25 7.27 Yes 74 1.23 Yes 0 0 No -24 0.85 Yes 40 89.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152366937 - NM_005431 XRCC2 0 . . . 2.26 68.34 24 5.39 No 5 1.01 Yes 0 0 No -23 0.61 No 42 54.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68622950 + NM_133509 RAD51B 0 . . . 0.66 58.12 30 5.38 No 15 0.23 No 0 0 No -22 0.58 No 35 70.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56783133 + NM_058216 RAD51C 0 . . . 2.81 67.61 15 4.58 No 71 0.27 No 0 0 No -34 0.35 No 23 44.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69007212 + NM_133509 RAD51B 0 . . . 2.56 84.2 35 6.24 Yes 50 0.84 Yes 0 0 No -32 0.7 Yes 49 40.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29093432 - NM_001005735 CHEK2 0 . . . 3.36 68.68 65 8.77 Yes 69 0.28 No 0 0 No -16 0.61 No 60 67.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94213329 - NM_005591 MRE11 0 . . . 2.12 85.04 21 5.03 No 61 1.67 Yes 0 0 No -20 0.63 No 47 93.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68433446 + NM_133509 RAD51B 0 . . . 10.53 89.29 26 5.65 Yes 46 -0.53 No 0 0 No -25 0.92 Yes 39 54.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68758388 + NM_133509 RAD51B 0 . . . 2.45 85.01 15 4.99 No 71 1.15 Yes 0 0 No -46 0.54 No 46 57.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48007983 + NM_000179 MSH6 0 . . . 0.98 0 14 5.19 No 65 -3.52 No 0 0 No -23 0.7 Yes 51 63.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68949261 + NM_133509 RAD51B 0 . . . 3.32 72.4 19 6.83 Yes 73 -5.95 No 0 0 No -18 0.76 Yes 53 32.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68701962 + NM_133509 RAD51B 0 . . . 5.5 73.12 38 6.06 Yes 59 0.68 No 0 0 No -28 0.36 No 48 73.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32926617 + NM_000059 BRCA2 0 . . . 3.85 64.58 30 5.28 No 68 -5.91 No 0 0 No -23 0.43 No 51 57.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47679161 + NM_000251 MSH2 0 . . . 2.1 70.01 30 5.7 Yes 56 0.69 No 0 0 No -29 0.8 Yes 42 46.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29125699 - NM_001005735 CHEK2 0 . . . 4.09 74.14 29 6.4 Yes 11 0.16 No 0 0 No -29 0.6 No 47 55.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68995741 + NM_133509 RAD51B 0 . . . 9.79 91.23 11 4.12 No 32 0.31 No 0 0 No -28 0.79 Yes 44 45.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68397081 + NM_133509 RAD51B 0 . . . 1.49 71.99 26 4.2 No 74 0.04 No 0 0 No -25 0.66 No 13 54.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68719998 + NM_133509 RAD51B 0 . . . 5.64 71.48 20 4.8 No 64 0.13 No 0 0 No -19 0.57 No 43 89.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190661275 + NM_000534 PMS1 0 . . . 8.54 68.94 18 6.25 Yes 12 1.61 Yes 0 0 No -23 0.75 Yes 35 37.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68988684 + NM_133509 RAD51B 0 . . . 5.33 74.41 41 6.96 Yes -3 0.74 No 0 0 No -35 0.32 No 45 93.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68602756 + NM_133509 RAD51B 0 . . . 1.59 0 33 5.83 Yes 75 0.75 No 0 0 No -25 0.5 No 51 41.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131920352 + NM_005732 RAD50 0 . . . 6.7 86.75 16 4.7 No 75 0.87 Yes 0 0 No -24 0.85 Yes 39 47.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59772078 - NM_032043 BRIP1 0 . . . 8.26 84.01 18 3.64 No 14 0.45 No 0 0 No -20 0.67 Yes 44 62.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69138483 + NM_133509 RAD51B 0 . . . 2.5 73.67 25 4.13 No 33 2.32 Yes 0 0 No -24 0.83 Yes 35 73.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37068619 + NM_000249 MLH1 0 . . . 3.02 0 20 4.73 No 2 0.41 No 0 0 No -19 0.57 No 49 59.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68790409 + NM_004360 CDH1 0 . . . 1.93 73.23 25 5.26 No 40 1.36 Yes 0 0 No -24 0.82 Yes 47 42.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69124161 + NM_133509 RAD51B 0 . . . 3.75 72.94 15 5.35 No 13 1.02 Yes 0 0 No -23 0.69 Yes 45 70.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68948683 + NM_133509 RAD51B 0 . . . 5.46 79.06 15 5.73 Yes 64 0.66 No 0 0 No -26 0.74 Yes 42 54.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45806018 - NM_001048171 MUTYH 0 . . . 6.84 85.01 19 4.8 No 13 0.05 No 0 0 No -18 0.27 No 51 49.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37054108 + NM_000249 MLH1 0 . . . 4.84 73.33 21 5.7 Yes 50 1.18 Yes 0 0 No -20 0.85 Yes 52 74.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68779417 + NM_004360 CDH1 0 . . . 0.52 70.85 29 6.23 Yes 68 -5.03 No 0 0 No -23 0.57 No 47 44.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848381 - NM_032043 BRIP1 0 . . . 0.23 0 23 5.23 No 48 1.39 Yes 0 0 No -30 0.36 No 43 58.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68431149 + NM_133509 RAD51B 0 . . . 5.61 94.27 9 3.87 No 76 -4.18 No 0 0 No -25 0.86 Yes 47 67.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21967123 - NM_000077 CDKN2A 0 . . . 1.28 64.5 14 4.34 No 66 0.16 No 0 0 No -23 0.79 Yes 47 72.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21976548 - NM_000077 CDKN2A 0 . . . 3.22 80.64 21 4.97 No 7 1.57 Yes 0 0 No -21 0.73 Yes 51 85.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68984781 + NM_133509 RAD51B 0 . . . 2.03 78.11 23 6 Yes -2 0.67 No 0 0 No -25 0.56 No 60 44.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56776758 + NM_058216 RAD51C 0 . . . 1.31 72.35 23 3.88 No 9 -1.73 No 0 0 No -23 0.61 No 38 35.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94194683 - NM_005591 MRE11 0 . . . 5.83 89.99 16 4.58 No 55 0.18 No 0 0 No -18 0.29 No 53 63.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215637395 - NM_000465 BARD1 0 . . . 1.48 77.84 28 5.36 No 64 -4.27 No 0 0 No -28 0.63 No 45 32.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94170628 - NM_005591 MRE11 0 . . . 1.49 71.81 26 5.75 Yes 1 -1.9 No 0 0 No -25 0.7 Yes 44 72.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47767686 + NM_000251 MSH2 0 . . . 7.92 80.9 20 7.14 Yes 61 0.23 No 0 0 No -19 0.66 No 43 89.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59828766 - NM_032043 BRIP1 0 . . . 1.7 65.07 52 5.99 Yes 72 0.14 No 0 0 No -31 0.64 No 42 71.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69057210 + NM_133509 RAD51B 0 . . . 3.48 0 18 3.95 No 38 1 Yes 0 0 No -24 0.82 Yes 53 73.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29128053 - NM_001005735 CHEK2 0 . . . 4.85 82.86 19 5.45 No 3 1 Yes 0 0 No -33 0.82 Yes 44 69.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68862426 + NM_004360 CDH1 0 . . . 5.57 78.97 30 5.98 Yes 58 1.6 Yes 0 0 No -29 0.63 No 36 66.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68865374 + NM_004360 CDH1 0 . . . 3.32 72.8 28 4.81 No 9 0.01 No 0 0 No -50 0.49 No 49 88.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68662227 + NM_133509 RAD51B 0 . . . 0.6 74.56 36 6.04 Yes 65 0.8 Yes 0 0 No -25 0.38 No 40 48.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90968928 - NM_002485 NBN 0 . . . 6.61 76.03 27 5.74 Yes 59 1.26 Yes 0 0 No -26 0.67 Yes 48 88.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59940688 - NM_032043 BRIP1 0 . . . 10.96 89.48 16 5.05 No 17 0.51 No 0 0 No -20 0.58 No 41 93.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37080464 + NM_000249 MLH1 0 . . . 1.83 0 21 7.21 Yes 43 0.61 No 0 0 No -20 0.73 Yes 44 86.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69099905 + NM_133509 RAD51B 0 . . . 0.96 65.72 39 6.71 Yes 6 1.15 Yes 0 0 No -29 0.64 No 52 56.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152371613 - NM_005431 XRCC2 0 . . . 3.15 66.46 35 5.32 No 16 0.96 Yes 0 0 No -34 0.6 No 42 89.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47666890 + NM_000251 MSH2 0 . . . 7.09 86.48 29 6.11 Yes 57 0.58 No 0 0 No -32 0.67 Yes 16 79.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32918019 + NM_000059 BRCA2 0 . . . 0.27 65.97 14 4.48 No 1 0.68 No 0 0 No -20 0.54 No 40 41.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69006257 + NM_133509 RAD51B 0 . . . 4.8 78.87 16 4.69 No 52 0.02 No 0 0 No -25 0.75 Yes 45 45.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47628938 + NM_000251 MSH2 0 . . . 2.24 80.12 26 6.32 Yes 7 1.14 Yes 0 0 No -25 0.9 Yes 41 73.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215623820 - NM_000465 BARD1 0 . . . 1.94 64.18 21 4.8 No 74 0.81 Yes 0 0 No -25 0.53 No 46 68.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48013601 + NM_000179 MSH6 0 . . . 3.67 73.47 29 5.91 Yes 42 0.99 Yes 0 0 No -28 0.71 Yes 42 76.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47707754 + NM_000251 MSH2 0 . . . 1.58 73 21 5.09 No -4 0.57 No 0 0 No -20 0.7 Yes 62 41.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59832754 - NM_032043 BRIP1 0 . . . 7.76 84.15 39 6.11 Yes 6 1.05 Yes 0 0 No -31 0.64 No 52 80.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152361895 - NM_005431 XRCC2 0 . . . 7.89 76.34 34 5.73 Yes 35 0.46 No 0 0 No -26 0.49 No 43 56.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152360897 - NM_005431 XRCC2 0 . . . 3.35 80.08 18 6.03 Yes 61 0.39 No 0 0 No -29 0.31 No 48 34.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68536897 + NM_133509 RAD51B 0 . . . 3.21 67.55 12 5 No 67 0.88 Yes 0 0 No -28 0.33 No 39 74.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68508493 + NM_133509 RAD51B 0 . . . 11.03 83.51 18 5.48 No 18 2.34 Yes 0 0 No -30 0.8 Yes 40 86.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32972172 + NM_000059 BRCA2 0 . . . 2.72 71.56 25 5.39 No -3 0.99 Yes 0 0 No -22 0.73 Yes 46 49.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68596384 + NM_133509 RAD51B 0 . . . 3.03 77.57 17 4.8 No 74 -5.76 No 0 0 No -50 0.26 No 43 55.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68742624 + NM_133509 RAD51B 0 . . . 4.66 77.49 23 3.47 No 37 1.55 Yes 0 0 No -22 0.52 No 21 90.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6023294 - NM_000535 PMS2 0 . . . 1.31 72.91 25 6.28 Yes 5 0.2 No 0 0 No -24 0.81 Yes 55 33.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41206037 - NM_007294 BRCA1 0 . . . 1.38 82.36 34 7.52 Yes 17 0.42 No 0 0 No -33 0.51 No 47 83.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59913794 - NM_032043 BRIP1 0 . . . 0.41 74.71 32 4.94 No 46 0.41 No 0 0 No -21 0.38 No 49 41.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68860110 + NM_004360 CDH1 0 . . . 4.95 80.76 16 5.66 Yes 31 -2.97 No 0 0 No -15 0.5 No 42 56.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47737854 + NM_000251 MSH2 0 . . . 1.26 0 29 5.47 No 39 1.5 Yes 0 0 No -24 0.37 No 52 60.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68991437 + NM_133509 RAD51B 0 . . . 7.52 88.7 18 3.35 No 13 0.47 No 0 0 No -17 0.58 No 45 66.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32898937 + NM_000059 BRCA2 0 . . . 5.97 86.05 67 9.06 Yes 58 0.83 Yes 0 0 No -29 0.83 Yes 46 51.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68680162 + NM_133509 RAD51B 0 . . . 3.51 74.73 30 5.2 No 59 -0.93 No 0 0 No -29 0.47 No 49 92.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56795594 + NM_058216 RAD51C 0 . . . 5.92 82.31 12 5.39 No 59 1.06 Yes 0 0 No -50 0.47 No 55 55.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41011520 + NM_001164269 RAD51 0 . . . 4.55 72.94 13 5.1 No 23 1.59 Yes 0 0 No -59 0.84 Yes 45 75.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68607435 + NM_133509 RAD51B 0 . . . 7.39 79.33 26 5.19 No 46 0.7 No 0 0 No -25 0.78 Yes 48 89.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69053822 + NM_133509 RAD51B 0 . . . 4.6 74.15 24 6.69 Yes 36 -1.41 No 0 0 No -23 0.63 No 38 61.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68626474 + NM_133509 RAD51B 0 . . . 6.81 77.12 26 6.08 Yes 27 2.09 Yes 0 0 No -25 0.94 Yes 41 48.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56775259 + NM_058216 RAD51C 0 . . . 0.52 0 25 3.72 No 8 0.4 No 0 0 No -24 0.73 Yes 50 73.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69021227 + NM_133509 RAD51B 0 . . . 2.93 72.41 22 6.32 Yes -1 1.32 Yes 0 0 No -21 0.87 Yes 42 57.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37045360 + NM_000249 MLH1 0 . . . 0.61 65.01 44 7.26 Yes 31 0.56 No 0 0 No -30 0.87 Yes 41 61.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68826101 + NM_004360 CDH1 0 . . . 0.19 85.91 23 4.26 No 37 1.56 Yes 0 0 No -21 0.82 Yes 44 58.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94221811 - NM_005591 MRE11 0 . . . 6.69 74.25 13 9.74 Yes 66 0.66 No 0 0 No -24 0.83 Yes 46 68.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69031526 + NM_133509 RAD51B 0 . . . 1.41 72.32 27 5.29 No 66 -4.27 No 0 0 No -26 0.73 Yes 47 43.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131905751 + NM_005732 RAD50 0 . . . 1.6 58.41 27 5.39 No 73 -5.65 No 0 0 No -27 0.63 No 41 18.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190737223 + NM_000534 PMS1 0 . . . 3.81 73.91 15 5.38 No 43 -4.53 No 0 0 No -19 0.48 No 42 74.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69093069 + NM_133509 RAD51B 0 . . . 4.83 69.98 14 6.15 Yes 30 0.55 No 0 0 No -29 0.48 No 35 71.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131981660 + NM_005732 RAD50 0 . . . 1.79 66.11 29 4.94 No 50 1.08 Yes 0 0 No -28 0.74 Yes 45 33.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68364468 + NM_133509 RAD51B 0 . . . 2.63 68.36 25 5.49 No 16 0.97 Yes 0 0 No -24 0.88 Yes 42 88.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59758254 - NM_032043 BRIP1 0 . . . 1.38 78.58 17 4.8 No 1 0.78 Yes 0 0 No -19 0.58 No 40 62.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41202517 - NM_007294 BRCA1 0 . . . 2.02 0 23 5.85 Yes 45 1.11 Yes 0 0 No -22 0.52 No 35 34.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190712220 + NM_000534 PMS1 0 . . . 3.13 75.75 31 5.19 No 37 0.88 Yes 0 0 No -27 0.54 No 28 42.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68891536 + NM_133509 RAD51B 0 . . . 3.41 81.49 20 5.1 No 33 1.29 Yes 0 0 No -19 0.69 Yes 18 42.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68680980 + NM_133509 RAD51B 0 . . . 3.74 73.35 38 7.73 Yes 63 1.37 Yes 0 0 No -37 0.74 Yes 42 92.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215654837 - NM_000465 BARD1 0 . . . 2.85 73.83 24 3.06 No 72 0.75 No 0 0 No -23 0.95 Yes 54 22.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131955052 + NM_005732 RAD50 0 . . . 5.75 74.62 13 4.95 No 30 1.32 Yes 0 0 No -12 0.27 No 39 54.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6050055 - NM_000535 PMS2 0 . . . 1.76 76.65 24 5.2 No 52 -2.94 No 0 0 No -23 0.78 Yes 61 33.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41279240 - NM_007294 BRCA1 0 . . . 3.56 80.66 28 6.38 Yes 26 -2.33 No 0 0 No -27 0.79 Yes 50 87.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68819162 + NM_133509 RAD51B 0 . . . 8.97 74.76 50 7.21 Yes 9 2.2 Yes 0 0 No -49 0.67 Yes 49 81.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68921456 + NM_133509 RAD51B 0 . . . 1.79 0 59 5.61 Yes 65 0.62 No 0 0 No -28 0.66 No 53 60.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68848662 + NM_004360 CDH1 0 . . . 2.92 54.65 16 4.6 No 76 0.28 No 0 0 No -27 0.79 Yes 44 53.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68597899 + NM_133509 RAD51B 0 . . . 3.29 66.47 16 5.1 No 44 0.63 No 0 0 No -19 0.62 No 37 44.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47793295 + NM_000251 MSH2 0 . . . 2.39 76.36 56 6.59 Yes 71 -1.64 No 0 0 No -25 0.57 No 48 52.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89722999 + NM_000314 PTEN 0 . . . 1.83 70.95 38 7.09 Yes 45 1.29 Yes 0 0 No -37 0.7 Yes 44 62.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68518402 + NM_133509 RAD51B 0 . . . 1.95 74.99 14 8.87 Yes 76 1.12 Yes 0 0 No -29 0.84 Yes 50 47.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69042276 + NM_133509 RAD51B 0 . . . 1.55 64.92 21 5.2 No 47 -4.04 No 0 0 No -20 0.71 Yes 63 20 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56783541 + NM_058216 RAD51C 0 . . . 0.32 74.68 24 4.78 No 32 0.89 Yes 0 0 No -23 0.82 Yes 54 72.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215600395 - NM_000465 BARD1 0 . . . 2.45 0 13 5.12 No 35 0.01 No 0 0 No -24 0.35 No 53 37.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131936317 + NM_005732 RAD50 0 . . . 0.06 0 20 4.83 No 28 0.39 No 0 0 No -23 0.59 No 25 79.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75502348 - NM_001040108 MLH3 0 . . . 0.47 69.74 23 2.9 No 60 0.52 No 0 0 No -23 0.61 No 30 63.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41017779 + NM_001164269 RAD51 0 . . . 2.3 70.91 18 4.99 No 73 0.69 No 0 0 No -26 0.71 Yes 34 48.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108129785 + NM_000051 ATM 0 . . . 2.05 70.91 31 4.42 No -3 0.2 No 0 0 No -22 0.68 Yes 42 62.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84391708 - NM_139076 FAM175A 0 . . . 0.27 68.38 30 7.08 Yes 48 0.24 No 0 0 No -25 0.76 Yes 45 74.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68386740 + NM_133509 RAD51B 0 . . . 1.18 0 34 5.74 Yes 19 0.1 No 0 0 No -33 0.45 No 39 30.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89727990 + NM_000314 PTEN 0 . . . 6.53 81.59 15 3.61 No 10 0.48 No 0 0 No -23 0.97 Yes 45 74.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68437578 + NM_133509 RAD51B 0 . . . 4.95 85.98 34 6.24 Yes 70 0.89 Yes 0 0 No -26 0.62 No 48 63.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75495685 - NM_001040108 MLH3 0 . . . 2.24 80.12 18 4.23 No 7 1.16 Yes 0 0 No -27 0.56 No 51 86.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32915564 + NM_000059 BRCA2 0 . . . 0.02 67.49 42 6.93 Yes 73 -5.21 No 0 0 No -41 0.73 Yes 48 65.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68769735 + NM_004360 CDH1 0 . . . 5.2 85.02 29 5.66 Yes 5 1.23 Yes 0 0 No -28 0.49 No 53 80.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68708510 + NM_133509 RAD51B 0 . . . 3.76 80.31 22 5.02 No 40 0.94 Yes 0 0 No -21 0.76 Yes 18 78.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47731688 + NM_000251 MSH2 0 . . . 0.93 63.45 23 4.99 No 35 -2.43 No 0 0 No -22 0.6 No 59 33.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47653584 + NM_000251 MSH2 0 . . . 1.5 70.34 24 5.44 No 65 0.82 Yes 0 0 No -27 0.61 No 48 75.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68512959 + NM_133509 RAD51B 0 . . . 2 85.41 18 4.9 No 76 1.46 Yes 0 0 No -25 0.22 No 50 83.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69130274 + NM_133509 RAD51B 0 . . . 1.93 0 25 5.96 Yes 67 0.83 Yes 0 0 No -24 0.7 Yes 45 87.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37090251 + NM_000249 MLH1 0 . . . 5.46 82.33 26 5.09 No 2 1.43 Yes 0 0 No -25 0.74 Yes 46 96.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215599645 - NM_000465 BARD1 0 . . . 2.11 0 30 5.3 No 54 1.63 Yes 0 0 No -29 0.8 Yes 45 66.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59840654 - NM_032043 BRIP1 0 . . . 6.64 78.76 18 4.9 No 40 0.86 Yes 0 0 No -35 0.81 Yes 46 43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152353969 - NM_005431 XRCC2 0 . . . 8.8 86.86 24 5.49 No 28 0.46 No 0 0 No -23 0.39 No 30 90.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68470421 + NM_133509 RAD51B 0 . . . 5.86 72.01 23 6.23 Yes 59 -1.73 No 0 0 No -22 0.87 Yes 41 71.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59942795 - NM_032043 BRIP1 0 . . . 4.96 82.63 33 6.21 Yes 42 0.57 No 0 0 No -32 0.85 Yes 38 52.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90963537 - NM_002485 NBN 0 . . . 2.3 84.41 37 6.24 Yes 57 1.83 Yes 0 0 No -34 0.63 No 43 73.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59897468 - NM_032043 BRIP1 0 . . . 1.89 62.04 35 5.05 No 25 1.05 Yes 0 0 No -34 0.64 No 53 75.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84400252 - NM_139076 FAM175A 0 . . . 7.4 71.88 27 4.34 No 71 0.77 No 0 0 No -12 0.29 No 35 76.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68697192 + NM_133509 RAD51B 0 . . . 1.35 68.86 19 4.8 No 55 0.67 No 0 0 No -25 0.8 Yes 52 50.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47651827 + NM_000251 MSH2 0 . . . 2.13 78.65 13 5.19 No 38 -2.17 No 0 0 No -28 0.27 No 52 54.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47768058 + NM_000251 MSH2 0 . . . 1.83 76.63 20 4.9 No 8 0.82 Yes 0 0 No -19 0.9 Yes 43 67.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68660381 + NM_133509 RAD51B 0 . . . 4.63 74.66 26 5.39 No 34 -3.72 No 0 0 No -25 0.89 Yes 36 76.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1218023 + NM_000455 STK11 0 . . . 3.62 65.65 25 4.1 No 48 0.57 No 0 0 No -22 0.84 Yes 56 51.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105197727 + NM_021930 RINT1 0 . . . 0.77 62.3 21 5.82 Yes 73 -5.81 No 0 0 No -21 0.65 No 45 64.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68484260 + NM_133509 RAD51B 0 . . . 4.38 61.37 22 4.58 No -1 0.55 No 0 0 No -21 0.8 Yes 37 62.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69076561 + NM_133509 RAD51B 0 . . . 4.62 0 19 5.8 Yes 76 1.21 Yes 0 0 No -13 0.66 No 49 60.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68489982 + NM_133509 RAD51B 0 . . . 3.7 71.84 20 3.78 No -4 0.24 No 0 0 No -19 0.77 Yes 40 42.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68303247 + NM_133509 RAD51B 0 . . . 3.75 84.95 28 5.73 Yes 68 0.3 No 0 0 No -31 0.81 Yes 22 70.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68387246 + NM_133509 RAD51B 0 . . . 1.05 74.18 26 3.59 No 25 1.54 Yes 0 0 No -22 0.8 Yes 33 51.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68810176 + NM_133509 RAD51B 0 . . . 8.32 86.49 37 5.92 Yes 13 0.94 Yes 0 0 No -22 0.9 Yes 35 60.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48011943 + NM_000179 MSH6 0 . . . 0.24 60.52 22 4.1 No 17 -2.74 No 0 0 No -21 0.87 Yes 59 25.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68909975 + NM_133509 RAD51B 0 . . . 7.06 90.78 17 5.57 Yes 43 0.21 No 0 0 No -16 0.64 No 49 69.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59815586 - NM_032043 BRIP1 0 . . . 6.16 89.88 42 5 No 15 0.26 No 0 0 No -30 0.67 Yes 47 88.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48008041 + NM_000179 MSH6 0 . . . 2.4 66.26 25 4.81 No 50 0.5 No 0 0 No -24 0.69 Yes 40 35.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68721557 + NM_133509 RAD51B 0 . . . 3.65 72.16 19 5 No 70 -3.14 No 0 0 No -18 0.62 No 43 69.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47703396 + NM_000251 MSH2 0 . . . 4.59 72.12 18 4.21 No 42 1.72 Yes 0 0 No -37 0.72 Yes 45 39.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69043212 + NM_133509 RAD51B 0 . . . 6.01 77.2 18 4.9 No 3 0.27 No 0 0 No -17 0.68 Yes 45 68.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41025093 + NM_001164269 RAD51 0 . . . 5.36 83.21 23 7.03 Yes 36 1.36 Yes 0 0 No -27 0.76 Yes 22 67.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108167643 + NM_000051 ATM 0 . . . 0.07 71.97 27 5.29 No 70 -2.4 No 0 0 No -26 0.78 Yes 46 54.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37046071 + NM_000249 MLH1 0 . . . 5.98 90.81 38 7.21 Yes 24 1.01 Yes 0 0 No -37 0.78 Yes 44 89.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47805601 + NM_000251 MSH2 0 . . . 0.36 0 22 3.73 No 16 1.09 Yes 0 0 No -16 0.77 Yes 42 95.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47671787 + NM_000251 MSH2 0 . . . 2.57 79.86 16 5.61 Yes 68 0.59 No 0 0 No -24 0.4 No 53 70.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69005182 + NM_133509 RAD51B 0 . . . 7.73 92.63 12 5.48 No 41 0.92 Yes 0 0 No -30 0.54 No 45 87.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94212093 - NM_005591 MRE11 0 . . . 5.53 79.3 24 4.21 No 51 1.02 Yes 0 0 No -26 0.7 Yes 46 87.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47746708 + NM_000251 MSH2 0 . . . 8.47 90.16 16 4.69 No 15 0.19 No 0 0 No -34 0.85 Yes 39 56.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108140160 + NM_000051 ATM 0 . . . 7.92 76.3 18 5.26 No 17 1.41 Yes 0 0 No -32 0.9 Yes 41 84.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90977556 - NM_002485 NBN 0 . . . 1.88 74.11 22 5.62 Yes 13 0.42 No 0 0 No -21 0.67 Yes 45 87.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56797208 + NM_058216 RAD51C 0 . . . 5.47 85.37 42 7.02 Yes 76 1.49 Yes 0 0 No -25 0.57 No 50 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56779721 + NM_058216 RAD51C 0 . . . 3.61 69.68 21 4.9 No 67 -3.16 No 0 0 No -20 0.59 No 46 44.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59800896 - NM_032043 BRIP1 0 . . . 7.25 80.04 35 5.83 Yes 57 0.88 Yes 0 0 No -29 0.52 No 38 62.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37041476 + NM_000249 MLH1 0 . . . 0.83 70.78 22 4.8 No -1 1.18 Yes 0 0 No -16 0.68 Yes 59 42.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41241137 - NM_007294 BRCA1 0 . . . 0.42 74.73 21 4.9 No 37 0.74 No 0 0 No -20 0.67 Yes 21 87.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108205208 + NM_000051 ATM 0 . . . 2.6 83.54 30 5.83 Yes 35 1.26 Yes 0 0 No -29 0.79 Yes 46 84.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69076765 + NM_133509 RAD51B 0 . . . 4.28 79.39 21 4.8 No 4 0.61 No 0 0 No -25 0.43 No 51 54.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68772615 + NM_004360 CDH1 0 . . . 4.64 88.54 18 4.9 No 50 0.61 No 0 0 No -17 0.65 No 49 57.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47757855 + NM_000251 MSH2 0 . . . 3.01 62.26 18 5.38 No 63 0.82 Yes 0 0 No -27 0.75 Yes 28 66.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68818727 + NM_004360 CDH1 0 . . . 10.48 92.54 15 5.2 No 22 1.93 Yes 0 0 No -45 0.32 No 36 86.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105176630 + NM_021930 RINT1 0 . . . 6.2 89.93 22 5.29 No 56 0.23 No 0 0 No -28 0.39 No 34 85.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68458316 + NM_133509 RAD51B 0 . . . 0.25 74.07 18 5.36 No -3 0.77 Yes 0 0 No -26 0.65 No 41 51.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59791581 - NM_032043 BRIP1 0 . . . 3.47 71.85 23 4.04 No 63 -5.19 No 0 0 No -23 0.54 No 39 85.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75511840 - NM_001040108 MLH3 0 . . . 2.82 75.25 15 5.34 No 33 1.2 Yes 0 0 No -55 0.33 No 25 71.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89650516 + NM_000314 PTEN 0 . . . 3.13 84.79 19 5.02 No 2 0.99 Yes 0 0 No -23 0.63 No 25 64.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40988795 + NM_001164269 RAD51 0 . . . 1.75 70.25 23 5.2 No 3 0.57 No 0 0 No -22 0.66 No 44 40.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68982182 + NM_133509 RAD51B 0 . . . 11.15 88.27 31 5.81 Yes 40 1.89 Yes 0 0 No -30 0.54 No 15 56.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68604387 + NM_133509 RAD51B 0 . . . 0.17 58.88 72 8.21 Yes 12 0.15 No 0 0 No -31 0.68 Yes 21 53.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68840061 + NM_133509 RAD51B 0 . . . 0.11 66.89 25 5.39 No 68 1.32 Yes 0 0 No -24 0.48 No 54 55.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59856421 - NM_032043 BRIP1 0 . . . 1.47 58.25 20 4.69 No 20 1.01 Yes 0 0 No -23 0.64 No 38 62.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108107903 + NM_000051 ATM 0 . . . 3.54 0 12 6.4 Yes 49 1.09 Yes 0 0 No -34 0.8 Yes 39 31.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59782648 - NM_032043 BRIP1 0 . . . 1.46 65.15 29 5.29 No 55 -4.07 No 0 0 No -28 0.55 No 45 82.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48029654 + NM_000179 MSH6 0 . . . 3.66 80.12 25 6.07 Yes 7 1.16 Yes 0 0 No -24 0.76 Yes 51 78.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59930238 - NM_032043 BRIP1 0 . . . 6.57 80.89 28 5.24 No 54 1.27 Yes 0 0 No -27 0.83 Yes 49 62.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59755215 - NM_032043 BRIP1 0 . . . 4.5 74.91 19 5 No 48 -2.61 No 0 0 No -18 0.46 No 44 84.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68355989 + NM_133509 RAD51B 0 . . . 1.4 69.9 40 6.59 Yes 58 -2.66 No 0 0 No -34 0.49 No 47 57.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48032552 + NM_000179 MSH6 0 . . . 7.52 82.31 25 4.8 No 2 1.17 Yes 0 0 No -21 0.48 No 55 68.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68557587 + NM_133509 RAD51B 0 . . . 5.13 70.44 23 3.89 No 55 1.36 Yes 0 0 No -22 0.51 No 26 85.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89719984 + NM_000314 PTEN 0 . . . 3.72 81.66 25 5.1 No 17 0.66 No 0 0 No -27 0.89 Yes 38 88.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68737311 + NM_133509 RAD51B 0 . . . 2.43 74.87 28 5.14 No 68 0.6 No 0 0 No -22 0.78 Yes 46 89.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68884389 + NM_133509 RAD51B 0 . . . 1.03 78.22 19 5.82 Yes 3 0.61 No 0 0 No -31 0.5 No 51 44.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131928872 + NM_005732 RAD50 0 . . . 0.16 67.38 21 6.13 Yes 27 1.2 Yes 0 0 No -20 0.7 Yes 53 69.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152362443 - NM_005431 XRCC2 0 . . . 2.06 63.22 31 5.09 No 71 0.02 No 0 0 No -30 0.65 No 59 30.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108198402 + NM_000051 ATM 0 . . . 3.2 76.32 64 6.73 Yes 56 0.99 Yes 0 0 No -58 0.61 No 48 43.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68763112 + NM_133509 RAD51B 0 . . . 1.62 0 43 6.71 Yes 65 0.36 No 0 0 No -25 0.69 Yes 49 63.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190725702 + NM_000534 PMS1 0 . . . 5.79 77.45 17 6.87 Yes 56 0.7 No 0 0 No -30 0.52 No 48 61.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68717989 + NM_133509 RAD51B 0 . . . 3.29 75.84 20 5.81 Yes 0 1.02 Yes 0 0 No -31 0.65 No 43 54.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32893885 + NM_000059 BRCA2 0 . . . 1.1 67.82 17 4.8 No 60 -4.7 No 0 0 No -44 0.36 No 50 35.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68522449 + NM_133509 RAD51B 0 . . . 2.02 71.18 29 5.92 Yes 72 -4.52 No 0 0 No -28 0.84 Yes 50 87.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41002112 + NM_001164269 RAD51 0 . . . 0.05 74.09 17 5.2 No 47 1.71 Yes 0 0 No -16 0.44 No 54 77.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68945083 + NM_133509 RAD51B 0 . . . 2.1 0 16 4.69 No 70 -3.6 No 0 0 No -21 0.53 No 36 79.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68871364 + NM_004360 CDH1 0 . . . 4.91 84.95 27 6.31 Yes 58 0.42 No 0 0 No -26 0.74 Yes 19 82.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68958117 + NM_133509 RAD51B 0 . . . 4.56 67.2 45 6.23 Yes 10 0.5 No 0 0 No -20 0.62 No 48 85.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131959484 + NM_005732 RAD50 0 . . . 0.79 0 27 4.65 No 38 -1.35 No 0 0 No -27 0.66 No 35 59.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68796898 + NM_004360 CDH1 0 . . . 6.31 82.76 48 8.47 Yes 25 0.47 No 0 0 No -47 0.39 No 38 84.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215613278 - NM_000465 BARD1 0 . . . 4.94 74.61 16 4.69 No 61 1.5 Yes 0 0 No -40 0.63 No 35 86.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47647522 + NM_000251 MSH2 0 . . . 8.97 79.73 9 3.87 No 19 0.83 Yes 0 0 No -31 0.4 No 39 94.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32953232 + NM_000059 BRCA2 0 . . . 1.12 69.43 26 5.46 No 51 -3.84 No 0 0 No -26 0.51 No 41 54.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69108417 + NM_133509 RAD51B 0 . . . 4.98 67.1 9 5.29 No 52 0.39 No 0 0 No -21 0.29 No 42 58.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105188255 + NM_021930 RINT1 0 . . . 4.28 76.39 31 5.57 Yes 23 -2.13 No 0 0 No -28 0.29 No 50 85.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41004779 + NM_001164269 RAD51 0 . . . 6.91 81.96 23 4.66 No 6 0.92 Yes 0 0 No -22 0.88 Yes 41 80.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131973322 + NM_005732 RAD50 0 . . . 8.38 83.84 45 6.63 Yes 15 1.11 Yes 0 0 No -38 0.37 No 43 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69143275 + NM_133509 RAD51B 0 . . . 2.68 75.52 38 6.72 Yes 11 -2.55 No 0 0 No -23 0.4 No 47 31.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152351280 - NM_005431 XRCC2 0 . . . 4.74 84.41 47 7.05 Yes 41 1.39 Yes 0 0 No -27 0.72 Yes 44 53.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47701632 + NM_000251 MSH2 0 . . . 1.76 0 35 4.95 No 49 1.14 Yes 0 0 No -34 0.61 No 26 90.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68376163 + NM_133509 RAD51B 0 . . . 4.31 73.96 14 4.32 No 73 -2.85 No 0 0 No -14 0.25 No 54 37.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131937742 + NM_005732 RAD50 0 . . . 3.18 73.67 22 6.08 Yes 29 -3.81 No 0 0 No -21 0.94 Yes 43 92.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215601890 - NM_000465 BARD1 0 . . . 6.4 79.3 34 7.69 Yes 61 1.07 Yes 0 0 No -33 0.61 No 47 68.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69143467 + NM_133509 RAD51B 0 . . . 4.31 69.3 31 4.65 No 39 -0.43 No 0 0 No -30 0.68 Yes 40 48.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131950823 + NM_005732 RAD50 0 . . . 11.07 95.21 27 5.1 No 4 0.77 No 0 0 No -26 0.81 Yes 31 37.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190678113 + NM_000534 PMS1 0 . . . 0.48 56.94 22 4.9 No 13 0.33 No 0 0 No -21 0.86 Yes 38 42.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105202983 + NM_021930 RINT1 0 . . . 2.54 65.84 41 6.61 Yes 70 0.64 No 0 0 No -40 0.76 Yes 45 60.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68927716 + NM_133509 RAD51B 0 . . . 5.39 75.7 19 5 No 32 1.24 Yes 0 0 No -41 0.48 No 43 67.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68391916 + NM_133509 RAD51B 0 . . . 0.01 0 29 6.11 Yes 68 -2.22 No 0 0 No -28 0.54 No 27 78.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68679569 + NM_133509 RAD51B 0 . . . 1.79 0 26 5.59 Yes 10 0.07 No 0 0 No -25 0.93 Yes 48 89.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190649642 + NM_000534 PMS1 0 . . . 0.38 65.44 48 7.11 Yes 17 1.53 Yes 0 0 No -30 0.64 No 45 61.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29115949 - NM_001005735 CHEK2 0 . . . 0.72 65.67 17 6.39 Yes 58 -5.51 No 0 0 No -16 0.76 Yes 52 41.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6043283 - NM_000535 PMS2 0 . . . 6.61 73.25 42 6.25 Yes 2 1.41 Yes 0 0 No -23 0.91 Yes 35 63.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90978584 - NM_002485 NBN 0 . . . 2.93 81.7 22 5 No 55 0.82 Yes 0 0 No -21 0.92 Yes 43 83.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89645844 + NM_000314 PTEN 0 . . . 5.07 70.34 34 5.98 Yes 39 1.33 Yes 0 0 No -17 0.19 No 35 45.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131922370 + NM_005732 RAD50 0 . . . 1.26 66.37 45 7 Yes 55 -4.81 No 0 0 No -44 0.48 No 48 27.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48034710 + NM_000179 MSH6 0 . . . 2.32 71.32 20 6.93 Yes -3 0.72 No 0 0 No -29 0.63 No 61 49.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59938541 - NM_032043 BRIP1 0 . . . 2.29 71.87 15 5.57 Yes 51 0.52 No 0 0 No -24 0.54 No 46 54.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89631353 + NM_000314 PTEN 0 . . . 2.81 68.95 44 7.43 Yes 16 1.16 Yes 0 0 No -24 0.83 Yes 42 94.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32916912 + NM_000059 BRCA2 0 . . . 2.1 59.7 17 4.61 No 72 0.19 No 0 0 No -24 0.47 No 38 60.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47746551 + NM_000251 MSH2 0 . . . 1.77 0 23 4.69 No 2 0.8 Yes 0 0 No -23 0.84 Yes 56 48.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94190344 - NM_005591 MRE11 0 . . . 8.99 88.63 42 5.28 No 59 1.7 Yes 0 0 No -27 0.43 No 35 50.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59798985 - NM_032043 BRIP1 0 . . . 0.64 0 33 6.89 Yes 13 0.35 No 0 0 No -32 0.86 Yes 52 60.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68441958 + NM_133509 RAD51B 0 . . . 2.98 78.84 17 5.57 Yes 24 0.12 No 0 0 No -16 0.7 Yes 47 93.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105202127 + NM_021930 RINT1 0 . . . 1.73 86.71 55 6.87 Yes 33 0.53 No 0 0 No -40 0.3 No 50 63.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108112329 + NM_000051 ATM 0 . . . 5.3 71.9 20 5.1 No 28 0.53 No 0 0 No -24 0.51 No 46 70.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131946834 + NM_005732 RAD50 0 . . . 1 74.68 18 4.58 No 8 1.49 Yes 0 0 No -17 0.84 Yes 50 67.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69114369 + NM_133509 RAD51B 0 . . . 6.45 79.56 25 4.12 No 17 0.64 No 0 0 No -29 0.73 Yes 41 96.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59894005 - NM_032043 BRIP1 0 . . . 2.48 89.6 30 5.48 No 50 1.38 Yes 0 0 No -27 0.6 No 48 48.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68602312 + NM_133509 RAD51B 0 . . . 3.42 78.33 29 6.32 Yes 46 0.81 Yes 0 0 No -28 0.75 Yes 42 71.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94159221 - NM_005591 MRE11 0 . . . 4.69 70.72 47 7.04 Yes 7 0.6 No 0 0 No -40 0.76 Yes 47 45.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59804961 - NM_032043 BRIP1 0 . . . 5.85 87.72 24 6.04 Yes 3 1 Yes 0 0 No -23 0.72 Yes 55 66.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190721901 + NM_000534 PMS1 0 . . . 1.64 65.02 17 5.65 Yes 49 -4.48 No 0 0 No -26 0.45 No 51 49.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68427228 + NM_133509 RAD51B 0 . . . 3.03 0 33 6.48 Yes 32 -2.19 No 0 0 No -27 0.84 Yes 47 29.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68685891 + NM_133509 RAD51B 0 . . . 5.9 86.29 16 5.26 No 4 0.52 No 0 0 No -21 0.46 No 44 49.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6032756 - NM_000535 PMS2 0 . . . 3.53 70.85 15 5.16 No -1 0.67 No 0 0 No -26 0.62 No 40 90.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1206933 + NM_000455 STK11 0 . . . 0.4 71.5 36 6.4 Yes 46 -3.44 No 0 0 No -35 0.58 No 46 52.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68525504 + NM_133509 RAD51B 0 . . . 1.7 64.54 16 5.15 No 24 -3 No 0 0 No -21 0.27 No 47 44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68455384 + NM_133509 RAD51B 0 . . . 2.95 82.71 29 5.37 No 35 0.63 No 0 0 No -29 0.36 No 13 33.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47795634 + NM_000251 MSH2 0 . . . 4.27 69.73 22 4.55 No -1 -1.95 No 0 0 No -21 0.63 No 42 86.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68770360 + NM_133509 RAD51B 0 . . . 0.91 71.52 23 3.88 No 41 0.62 No 0 0 No -17 0.7 Yes 58 46.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152364415 - NM_005431 XRCC2 0 . . . 3.7 76.8 17 5.28 No 7 1.41 Yes 0 0 No -24 0.36 No 51 74.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84388292 - NM_139076 FAM175A 0 . . . 0.5 71.83 17 5.29 No 36 0.14 No 0 0 No -16 0.47 No 49 40.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41211543 - NM_007294 BRCA1 0 . . . 3.73 70.41 25 5.23 No 72 -5.42 No 0 0 No -24 0.63 No 50 61.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68885219 + NM_133509 RAD51B 0 . . . 5.52 83.66 13 5.07 No 40 1.94 Yes 0 0 No -41 0.8 Yes 22 79.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47652996 + NM_000251 MSH2 0 . . . 2.3 84.41 22 5.27 No 20 0.27 No 0 0 No -21 0.84 Yes 46 66.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190697726 + NM_000534 PMS1 0 . . . 7.05 83.2 25 6.56 Yes 31 0.55 No 0 0 No -24 0.8 Yes 45 55.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40991525 + NM_001164269 RAD51 0 . . . 1.45 79.69 16 5.19 No 6 0.99 Yes 0 0 No -27 0.32 No 52 67.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190687320 + NM_000534 PMS1 0 . . . 0.01 81.03 24 5.91 Yes 13 0.34 No 0 0 No -28 0.74 Yes 45 62.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68459864 + NM_133509 RAD51B 0 . . . 3.92 83.11 12 5.19 No 56 0.4 No 0 0 No -56 0.64 No 51 75.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23644003 - NM_024675 PALB2 0 . . . 2.12 75.97 27 6.08 Yes 53 -3.79 No 0 0 No -26 0.91 Yes 49 41.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68888128 + NM_133509 RAD51B 0 . . . 3.5 80.09 31 5.83 Yes 70 0.84 Yes 0 0 No -30 0.93 Yes 49 66.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48029260 + NM_000179 MSH6 0 . . . 6.62 86.77 12 5.48 No 45 0.13 No 0 0 No -46 0.66 No 37 55.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29113968 - NM_001005735 CHEK2 0 . . . 2.03 86.71 25 4.32 No 76 0.74 No 0 0 No -22 0.72 Yes 51 49.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68812441 + NM_004360 CDH1 0 . . . 5 73.28 26 5.38 No 16 0.27 No 0 0 No -25 0.71 Yes 42 87.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7573714 - NM_000546 TP53 0 . . . 0.07 72.72 27 4.28 No 32 1.01 Yes 0 0 No -26 0.87 Yes 25 47.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6038698 - NM_000535 PMS2 0 . . . 6.44 81.29 24 5.4 No 13 0.24 No 0 0 No -24 0.48 No 50 70.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45800921 - NM_001048171 MUTYH 0 . . . 1.58 72.87 22 4.3 No 42 0.66 No 0 0 No -22 0.47 No 54 70.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68945563 + NM_133509 RAD51B 0 . . . 1.25 74.7 72 8.31 Yes -3 0.23 No 0 0 No -28 0.07 No 61 33.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89650019 + NM_000314 PTEN 0 . . . 5.19 75.91 24 5.33 No 16 0.54 No 0 0 No -24 0.8 Yes 42 51.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68855449 + NM_133509 RAD51B 0 . . . 2.66 0 24 4.98 No 65 1.23 Yes 0 0 No -28 0.82 Yes 52 97.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69125617 + NM_133509 RAD51B 0 . . . 0.88 71.89 16 5.38 No 0 0.17 No 0 0 No -51 0.73 Yes 46 58.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69101386 + NM_133509 RAD51B 0 . . . 0.3 57.92 21 5.97 Yes NA NA NA 0 0 No -27 0.64 No 27 54.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47649468 + NM_000251 MSH2 0 . . . 1.22 66.39 24 4.8 No 52 -4.51 No 0 0 No -57 0.29 No 54 50.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69050466 + NM_133509 RAD51B 0 . . . 0.95 67.34 38 7.09 Yes 34 0.12 No 0 0 No -37 0.69 Yes 39 40.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69032701 + NM_133509 RAD51B 0 . . . 1.95 63.75 14 5.1 No 31 0.76 No 0 0 No -19 0.36 No 27 57.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56779303 + NM_058216 RAD51C 0 . . . 3.43 66.94 9 3.87 No 66 0.72 No 0 0 No -23 0.78 Yes 45 43.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33430933 - NM_002878 RAD51D 0 . . . 3.04 79.6 22 5.16 No 4 0.91 Yes 0 0 No -21 0.72 Yes 54 71.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68754334 + NM_133509 RAD51B 0 . . . 3.01 69.28 12 4.91 No 27 -0.79 No 0 0 No -18 0.63 No 31 88.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108105448 + NM_000051 ATM 0 . . . 0.33 64.13 16 5.46 No 25 -3.75 No 0 0 No -15 0.38 No 41 45.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90947333 - NM_002485 NBN 0 . . . 4.91 85.31 24 5.29 No 28 0.56 No 0 0 No -24 0.42 No 48 66.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108219063 + NM_000051 ATM 0 . . . 5.8 78.37 21 6.24 Yes 0 0.72 No 0 0 No -20 0.86 Yes 40 54.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47709149 + NM_000251 MSH2 0 . . . 0.83 60.15 50 8.03 Yes 43 0.7 No 0 0 No -25 0.39 No 59 37.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68607952 + NM_133509 RAD51B 0 . . . 0.1 71.63 31 5.7 Yes 48 0.83 Yes 0 0 No -30 0.77 Yes 47 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68433509 + NM_133509 RAD51B 0 . . . 10.68 72.37 30 5.88 Yes 1 1.17 Yes 0 0 No -29 0.41 No 35 65.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32942201 + NM_000059 BRCA2 0 . . . 2.17 78.18 13 5 No 55 2.32 Yes 0 0 No -27 0.47 No 3 9.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32970512 + NM_000059 BRCA2 0 . . . 4.88 68.75 20 5.1 No 57 0.35 No 0 0 No -25 0.4 No 41 51.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68758240 + NM_133509 RAD51B 0 . . . 0.59 64.18 28 5.38 No 71 0.79 Yes 0 0 No -22 0.38 No 54 59.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7575926 - NM_000546 TP53 0 . . . 0.9 81.83 25 5.53 No 36 0.89 Yes 0 0 No -21 0.49 No 22 58.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47635773 + NM_000251 MSH2 0 . . . 5.34 73.41 62 12.02 Yes 64 0.79 Yes 0 0 No -30 0.62 No 49 53.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29102714 - NM_001005735 CHEK2 0 . . . 1.89 75.18 29 6.4 Yes 33 1.02 Yes 0 0 No -28 0.86 Yes 20 84.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152370877 - NM_005431 XRCC2 0 . . . 5.86 77.06 17 5.42 No 10 1.79 Yes 0 0 No -30 0.35 No 42 88.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68778242 + NM_133509 RAD51B 0 . . . 3.76 69.39 21 5.58 Yes 33 0.62 No 0 0 No -20 0.65 No 30 80.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68840496 + NM_133509 RAD51B 0 . . . 2.55 66.95 22 4.9 No -4 0.34 No 0 0 No -22 0.8 Yes 48 78.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59834802 - NM_032043 BRIP1 0 . . . 5.78 87.66 18 5.59 Yes 73 0.54 No 0 0 No -24 0.55 No 53 67.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41272779 - NM_007294 BRCA1 0 . . . 3.32 83.32 21 5.14 No 72 0.92 Yes 0 0 No -46 0.34 No 46 84.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89669602 + NM_000314 PTEN 0 . . . 8.91 92.11 20 4.54 No 32 1.26 Yes 0 0 No -26 0.63 No 41 72.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47721727 + NM_000251 MSH2 0 . . . 0.33 62.42 61 6.72 Yes 32 0.42 No 0 0 No -31 0.59 No 26 93.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68821431 + NM_004360 CDH1 0 . . . 8.36 86.43 23 5.83 Yes 9 0.91 Yes 0 0 No -22 0.93 Yes 42 60.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47660080 + NM_000251 MSH2 0 . . . 0.59 0 32 5.76 Yes 14 -1.08 No 0 0 No -35 0.88 Yes 44 28.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29105390 - NM_001005735 CHEK2 0 . . . 5.69 80.14 22 4.8 No 45 0.47 No 0 0 No -21 0.97 Yes 49 52.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59883383 - NM_032043 BRIP1 0 . . . 2.91 80.28 42 6.58 Yes 45 1.14 Yes 0 0 No -44 0.56 No 37 60.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56807114 + NM_058216 RAD51C 0 . . . 4.2 85.02 17 5.29 No 4 1.79 Yes 0 0 No -21 0.62 No 54 57.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68320834 + NM_133509 RAD51B 0 . . . 0.16 69.23 35 6.52 Yes 19 1.22 Yes 0 0 No -34 0.81 Yes 39 95.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215608731 - NM_000465 BARD1 0 . . . 3.03 70.59 14 4.87 No 20 1.8 Yes 0 0 No -26 0.44 No 38 94.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7583515 - NM_000546 TP53 0 . . . 6.42 76.65 17 5.2 No 62 0.51 No 0 0 No -20 0.32 No 47 46.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59801497 - NM_032043 BRIP1 0 . . . 1.9 0 23 5.83 Yes 55 1.24 Yes 0 0 No -22 0.79 Yes 41 77.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131927840 + NM_005732 RAD50 0 . . . 3.27 66.29 16 5.48 No 53 0.7 No 0 0 No -23 0.43 No 38 74.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108140463 + NM_000051 ATM 0 . . . 0.34 0 31 4.76 No 40 0.28 No 0 0 No -30 0.71 Yes 32 42.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131946774 + NM_005732 RAD50 0 . . . 1.27 74.35 21 5.08 No 3 0.01 No 0 0 No -20 0.74 Yes 45 62.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94160795 - NM_005591 MRE11 0 . . . 2.37 0 45 6.66 Yes 41 0.93 Yes 0 0 No -31 0.78 Yes 58 43.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68621380 + NM_133509 RAD51B 0 . . . 2.19 73.61 27 6.71 Yes 72 0.4 No 0 0 No -26 0.92 Yes 19 28.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1216459 + NM_000455 STK11 0 . . . 1.39 60.93 27 4.74 No 47 0.63 No 0 0 No -26 0.51 No 42 59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59781750 - NM_032043 BRIP1 0 . . . 1.91 69.45 24 5.1 No 7 0.71 No 0 0 No -24 0.46 No 51 89.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68907181 + NM_133509 RAD51B 0 . . . 0.57 73.8 17 4.36 No 1 1.35 Yes 0 0 No -16 0.7 Yes 51 42.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108093407 + NM_000051 ATM 0 . . . 6.31 78 15 3.73 No 29 0.98 Yes 0 0 No -31 0.77 Yes 29 50.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68997044 + NM_133509 RAD51B 0 . . . 2.88 67.29 29 6.63 Yes 26 -3.82 No 0 0 No -32 0.94 Yes 50 53.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68370038 + NM_133509 RAD51B 0 . . . 10.07 85.73 20 5.05 No 40 0.52 No 0 0 No -19 0.83 Yes 34 31.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84380782 - NM_139076 FAM175A 0 . . . 3.56 80.06 26 5.66 Yes -4 0.15 No 0 0 No -25 0.96 Yes 48 80.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56809461 + NM_058216 RAD51C 0 . . . 8.72 76.54 12 7 Yes 23 0.94 Yes 0 0 No -40 0.42 No 43 72.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47650631 + NM_000251 MSH2 0 . . . 5.5 90.92 39 6.7 Yes 57 1.25 Yes 0 0 No -21 0.42 No 8 27.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68779325 + NM_004360 CDH1 0 . . . 1.75 65.2 21 6.11 Yes 71 -6.11 No 0 0 No -20 0.87 Yes 35 47.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69007341 + NM_133509 RAD51B 0 . . . 2.22 66.02 16 4.58 No 6 1.19 Yes 0 0 No -35 0.46 No 49 39.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32906204 + NM_000059 BRCA2 0 . . . 1.9 78.29 29 5.91 Yes 46 0.32 No 0 0 No -26 0.6 No 53 45.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32942117 + NM_000059 BRCA2 0 . . . 6.11 64.01 26 4.64 No 12 0.89 Yes 0 0 No -26 0.62 No 46 43.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32958347 + NM_000059 BRCA2 0 . . . 2.99 80.54 15 5.09 No 49 0.81 Yes 0 0 No -21 0.32 No 43 34.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68756814 + NM_133509 RAD51B 0 . . . 7.84 82.51 16 4.69 No 69 2.05 Yes 0 0 No -22 0.54 No 46 62.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48025341 + NM_000179 MSH6 0 . . . 3.1 84.13 51 6.29 Yes 17 0.79 Yes 0 0 No -30 0.51 No 47 97.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89714219 + NM_000314 PTEN 0 . . . 0.02 0 20 4.05 No 7 0.97 Yes 0 0 No -19 0.88 Yes 44 37.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59761085 - NM_032043 BRIP1 0 . . . 1.78 71.96 33 5.91 Yes 42 1.11 Yes 0 0 No -28 0.58 No 50 57.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68461161 + NM_133509 RAD51B 0 . . . 2.3 72.82 27 6.71 Yes 5 0.96 Yes 0 0 No -24 0.63 No 46 51.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59805968 - NM_032043 BRIP1 0 . . . 6.05 79.92 25 4.9 No 24 1.21 Yes 0 0 No -20 0.47 No 34 90.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52433805 - NM_004656 BAP1 0 . . . 2.61 82.79 13 4.8 No 69 -2.51 No 0 0 No -37 0.49 No 50 65.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1222673 + NM_000455 STK11 0 . . . 3.79 73.28 19 4.47 No 52 -1.41 No 0 0 No -19 0.86 Yes 42 52.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69013853 + NM_133509 RAD51B 0 . . . 3.02 68.2 35 5.86 Yes 39 1.62 Yes 0 0 No -28 0.55 No 62 35.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68678257 + NM_133509 RAD51B 0 . . . 3.67 65.31 24 4.9 No 57 -3.59 No 0 0 No -23 0.91 Yes 48 53.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68597976 + NM_133509 RAD51B 0 . . . 4.08 79.49 25 4.99 No 61 -4.56 No 0 0 No -24 0.57 No 47 58.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538464 + NM_133509 RAD51B 0 . . . 11.67 94.52 18 4.58 No 19 0.95 Yes 0 0 No -17 0.46 No 39 81.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68408594 + NM_133509 RAD51B 0 . . . 7.92 86.76 13 4.9 No 1 1.05 Yes 0 0 No -22 0.71 Yes 44 87.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33430684 - NM_002878 RAD51D 0 . . . 5.93 77.03 24 7.11 Yes 0 0.25 No 0 0 No -46 0.65 No 45 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215667654 - NM_000465 BARD1 0 . . . 8.19 92.9 20 4.9 No 24 0.14 No 0 0 No -48 0.5 No 36 50.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68374676 + NM_133509 RAD51B 0 . . . 3.27 75.97 14 5.38 No 65 1.13 Yes 0 0 No -23 0.91 Yes 21 30.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6025074 - NM_000535 PMS2 0 . . . 2.13 72.53 24 5.2 No 3 1.28 Yes 0 0 No -23 0.89 Yes 42 47.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68833556 + NM_004360 CDH1 0 . . . 0.21 0 34 5.74 Yes 12 1.01 Yes 0 0 No -33 0.62 No 46 95.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29117089 - NM_001005735 CHEK2 0 . . . 1.43 0 37 6.27 Yes 54 0.07 No 0 0 No -30 0.33 No 54 60.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89708860 + NM_000314 PTEN 0 . . . 4.7 71.7 14 5 No 52 0.08 No 0 0 No -42 0.39 No 50 59.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29104425 - NM_001005735 CHEK2 0 . . . 7.4 83.05 26 5.18 No 51 2.56 Yes 0 0 No -23 0.7 Yes 46 45.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59788679 - NM_032043 BRIP1 0 . . . 4.67 78.53 37 5.79 Yes 73 1.3 Yes 0 0 No -29 0.46 No 46 83.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68718636 + NM_133509 RAD51B 0 . . . 0.89 78.82 27 5.08 No 20 0.71 No 0 0 No -26 0.58 No 50 84.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68526303 + NM_133509 RAD51B 0 . . . 9.87 80.65 26 6.32 Yes 50 1.24 Yes 0 0 No -33 0.66 No 32 45.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215654468 - NM_000465 BARD1 0 . . . 9.34 84.96 17 4.57 No 5 0.8 Yes 0 0 No -30 0.28 No 46 94.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75499036 - NM_001040108 MLH3 0 . . . 0.72 65.29 34 6.22 Yes 0 0.68 No 0 0 No -33 0.92 Yes 50 86.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104179538 - NM_001100119 XRCC3 0 . . . 7.08 79.14 15 5.29 No 37 -3.1 No 0 0 No -23 0.64 No 50 43.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56812074 + NM_058216 RAD51C 0 . . . 0.6 83.39 22 6.86 Yes 33 1.3 Yes 0 0 No -21 0.96 Yes 25 45.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37088192 + NM_000249 MLH1 0 . . . 3.66 85.81 28 9.13 Yes 9 1.03 Yes 0 0 No -27 0.96 Yes 49 90.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215608146 - NM_000465 BARD1 0 . . . 1.16 72.21 34 6.96 Yes 10 0.68 No 0 0 No -33 0.66 Yes 48 84.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131900264 + NM_005732 RAD50 0 . . . 1.67 78.48 19 4.76 No 11 0.37 No 0 0 No -18 0.69 Yes 47 53.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90978249 - NM_002485 NBN 0 . . . 1.68 66.05 13 4.36 No 15 1.36 Yes 0 0 No -23 0.54 No 43 62.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105200436 + NM_021930 RINT1 0 . . . 0.9 0 25 5.38 No 63 1.12 Yes 0 0 No -22 0.71 Yes 45 60.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94225881 - NM_005591 MRE11 0 . . . 0.53 70.69 12 5.66 Yes 44 0.93 Yes 0 0 No -28 0.46 No 47 73.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90984871 - NM_002485 NBN 0 . . . 0.95 66.9 26 5.13 No 71 0.57 No 0 0 No -25 0.84 Yes 46 48.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68867126 + NM_133509 RAD51B 0 . . . 1.29 0 35 5.85 Yes 8 1.07 Yes 0 0 No -22 0.68 Yes 44 90.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41267198 - NM_007294 BRCA1 0 . . . 4.68 75.91 28 5.01 No 28 1.26 Yes 0 0 No -31 0.62 No 39 45.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89648014 + NM_000314 PTEN 0 . . . 5.04 79.41 12 5.1 No 71 -4.21 No 0 0 No -22 0.81 Yes 48 49.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68825588 + NM_004360 CDH1 0 . . . 2.58 68.34 16 5.74 Yes 5 1.75 Yes 0 0 No -23 0.38 No 45 75.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68454470 + NM_133509 RAD51B 0 . . . 3.52 82 23 5.22 No 4 1.44 Yes 0 0 No -25 0.68 Yes 45 50.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69133913 + NM_133509 RAD51B 0 . . . 4.82 83.38 13 4.36 No 46 -4.77 No 0 0 No -43 0.6 No 52 47.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215610536 - NM_000465 BARD1 0 . . . 7.31 88.51 46 6.56 Yes 68 1.58 Yes 0 0 No -24 0.92 Yes 49 61.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32930118 + NM_000059 BRCA2 0 . . . 2.88 75.37 18 4.9 No 34 0.31 No 0 0 No -23 0.5 No 51 61.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47714083 + NM_000251 MSH2 0 . . . 7.68 80.43 22 5.23 No 23 0.39 No 0 0 No -24 0.53 No 40 69.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69072987 + NM_133509 RAD51B 0 . . . 0.2 66.81 13 4.36 No 44 0.03 No 0 0 No -32 0.87 Yes 51 46.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21979056 - NM_000077 CDKN2A 0 . . . 1.34 79.76 23 4.73 No 45 1.15 Yes 0 0 No -22 0.8 Yes 47 70.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37049974 + NM_000249 MLH1 0 . . . 2.97 75.4 25 3.54 No 28 0.44 No 0 0 No -25 0.41 No 49 48.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94153711 - NM_005591 MRE11 0 . . . 6.52 80.92 20 3.64 No 64 0.15 No 0 0 No -23 0.86 Yes 44 93.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59900145 - NM_032043 BRIP1 0 . . . 0.52 0 32 5.01 No 26 -3.23 No 0 0 No -32 0.82 Yes 33 61.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68499219 + NM_133509 RAD51B 0 . . . 2.41 66.98 18 6.96 Yes 65 1.1 Yes 0 0 No -26 0.64 No 49 52.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45801453 - NM_001048171 MUTYH 0 . . . 6.02 93.7 12 4.81 No 69 -0.93 No 0 0 No -19 0.61 No 38 53.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68737281 + NM_133509 RAD51B 0 . . . 2.65 84.19 24 4.3 No 38 0.59 No 0 0 No -29 0.34 No 24 46.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68527967 + NM_133509 RAD51B 0 . . . 6.88 85.02 34 6.02 Yes 60 1.36 Yes 0 0 No -33 0.88 Yes 53 71.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105189479 + NM_021930 RINT1 0 . . . 4.42 84.17 14 5.48 No 50 0.54 No 0 0 No -23 0.46 No 18 47.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105205064 + NM_021930 RINT1 0 . . . 2.07 0 12 4.89 No 51 0.86 Yes 0 0 No -24 0.33 No 43 70.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68892977 + NM_133509 RAD51B 0 . . . 5.99 87 29 5.01 No 14 1.39 Yes 0 0 No -28 0.85 Yes 44 95.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41269383 - NM_007294 BRCA1 0 . . . 8.22 87.51 17 4.79 No 10 0.99 Yes 0 0 No -22 0.24 No 48 94.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68626308 + NM_133509 RAD51B 0 . . . 1.76 77.69 24 4.9 No 58 -3.88 No 0 0 No -23 0.94 Yes 48 82.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68586520 + NM_133509 RAD51B 0 . . . 4.05 83.46 23 4.53 No 75 -1.86 No 0 0 No -22 0.75 Yes 43 63.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108145203 + NM_000051 ATM 0 . . . 5.65 71.48 28 6.16 Yes 48 0.51 No 0 0 No -27 0.61 No 49 71.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69078571 + NM_133509 RAD51B 0 . . . 4.54 0 19 6.4 Yes 29 0.07 No 0 0 No -21 0.9 Yes 45 45.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90954179 - NM_002485 NBN 0 . . . 7.21 83.71 20 6.24 Yes 19 1.83 Yes 0 0 No -22 0.58 No 46 71.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23625058 - NM_024675 PALB2 0 . . . 4.8 76.86 17 4.79 No 70 0.55 No 0 0 No -19 0.6 No 47 69.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152371670 - NM_005431 XRCC2 0 . . . 5.24 84.95 9 3.87 No 9 0.24 No 0 0 No -31 0.34 No 44 54.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68408459 + NM_133509 RAD51B 0 . . . 5.94 81.9 37 4.92 No 61 0.33 No 0 0 No -36 0.62 No 46 78.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23639299 - NM_024675 PALB2 0 . . . 3.68 70.85 66 8.94 Yes 23 1.57 Yes 0 0 No -31 0.6 No 40 80.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68782680 + NM_133509 RAD51B 0 . . . 4.17 78.86 18 4.01 No 69 0.43 No 0 0 No -17 0.39 No 54 60.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69047129 + NM_133509 RAD51B 0 . . . 4.44 69.75 60 6.81 Yes 21 0.82 Yes 0 0 No -25 0.55 No 37 51.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32966525 + NM_000059 BRCA2 0 . . . 9.51 82.5 20 4.79 No 48 0.66 No 0 0 No -35 0.72 Yes 48 82.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94192347 - NM_005591 MRE11 0 . . . 4.09 67.75 24 5.34 No 12 0.89 Yes 0 0 No -27 0.52 No 46 73.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68506267 + NM_133509 RAD51B 0 . . . 0.08 73.3 21 4.67 No -1 0.17 No 0 0 No -16 0.55 No 45 61.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89718410 + NM_000314 PTEN 0 . . . 6.1 84.18 31 5.63 Yes 21 1.48 Yes 0 0 No -30 0.84 Yes 46 70.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68867867 + NM_133509 RAD51B 0 . . . 0.61 77.8 39 5.65 Yes 5 0.92 Yes 0 0 No -32 0.62 No 49 49.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68373571 + NM_133509 RAD51B 0 . . . 3.91 88.02 20 4.58 No 71 1.03 Yes 0 0 No -24 0.62 No 45 69.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68767403 + NM_133509 RAD51B 0 . . . 8.74 87.12 28 5.29 No 51 1.82 Yes 0 0 No -27 0.39 No 49 52.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6028495 - NM_000535 PMS2 0 . . . 3.51 65.3 51 9.48 Yes 18 0.18 No 0 0 No -39 0.49 No 40 25.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1208832 + NM_000455 STK11 0 . . . 3.65 78.07 30 6.49 Yes 38 1.28 Yes 0 0 No -22 0.68 Yes 20 92.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68692230 + NM_133509 RAD51B 0 . . . 3.22 67.35 30 7 Yes 61 1.74 Yes 0 0 No -29 0.8 Yes 47 62.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190736181 + NM_000534 PMS1 0 . . . 1.42 64.44 12 5.72 Yes 59 0.07 No 0 0 No -26 0.69 Yes 42 54.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108179732 + NM_000051 ATM 0 . . . 2.37 79.15 14 5.07 No 40 0.34 No 0 0 No -20 0.61 No 26 48.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90995657 - NM_002485 NBN 0 . . . 2.39 84.41 15 4.44 No 19 1.21 Yes 0 0 No -34 0.44 No 39 95.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68672772 + NM_133509 RAD51B 0 . . . 4.68 79.39 22 6.41 Yes 0 0.55 No 0 0 No -28 0.54 No 51 67.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68362510 + NM_133509 RAD51B 0 . . . 8.9 94.46 29 5.42 No 49 0.08 No 0 0 No -28 0.88 Yes 36 64.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69019039 + NM_133509 RAD51B 0 . . . 7.09 83.3 11 4 No 35 -0.81 No 0 0 No -36 0.69 Yes 23 49.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108133579 + NM_000051 ATM 0 . . . 0.52 71.68 13 5.29 No -3 0.22 No 0 0 No -52 0.96 Yes 47 63.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68439042 + NM_133509 RAD51B 0 . . . 4.1 66.56 19 5 No 26 0.65 No 0 0 No -26 0.5 No 32 89.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32947836 + NM_000059 BRCA2 0 . . . 0.31 0 19 4.51 No 53 -1.87 No 0 0 No -18 0.5 No 52 59.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68621111 + NM_133509 RAD51B 0 . . . 3.82 65.58 51 7.21 Yes 47 0.68 No 0 0 No -38 0.47 No 38 65.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59824629 - NM_032043 BRIP1 0 . . . 9.7 84.31 28 6.55 Yes 43 1.35 Yes 0 0 No -20 0.59 No 39 55.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84381864 - NM_139076 FAM175A 0 . . . 0.76 74.26 12 4.15 No 35 0.29 No 0 0 No -23 0.74 Yes 14 36.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94198449 - NM_005591 MRE11 0 . . . 8.55 84.44 54 6.99 Yes 7 1.1 Yes 0 0 No -16 0.34 No 42 67.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75485110 - NM_001040108 MLH3 0 . . . 4.17 71.21 18 4.9 No 40 0.95 Yes 0 0 No -40 0.53 No 48 42.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68447541 + NM_133509 RAD51B 0 . . . 2.46 0 38 6.43 Yes 68 -4.19 No 0 0 No -25 0.8 Yes 38 37.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59936197 - NM_032043 BRIP1 0 . . . 0.04 61.77 41 5.69 Yes 47 0.73 No 0 0 No -28 0.62 No 11 73.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68683733 + NM_133509 RAD51B 0 . . . 5.95 74.78 33 5.74 Yes 14 1.75 Yes 0 0 No -32 0.7 Yes 44 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105175839 + NM_021930 RINT1 0 . . . 0.53 68.6 28 8.06 Yes 52 0.04 No 0 0 No -24 0.7 Yes 48 71.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69144622 + NM_133509 RAD51B 0 . . . 4.54 83.35 25 5.1 No 39 -2.04 No 0 0 No -24 0.55 No 51 86.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215644764 - NM_000465 BARD1 0 . . . 4.91 71.19 23 5 No 22 0.19 No 0 0 No -22 0.95 Yes 46 51.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90972534 - NM_002485 NBN 0 . . . 5.68 72.04 17 5.57 Yes 17 0.41 No 0 0 No -16 0.74 Yes 38 49.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68855403 + NM_133509 RAD51B 0 . . . 0.15 0 21 7.48 Yes 19 1.23 Yes 0 0 No -20 0.92 Yes 35 89.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68735695 + NM_133509 RAD51B 0 . . . 8.24 90.69 24 4.72 No 10 0.47 No 0 0 No -27 0.58 No 48 89.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68505067 + NM_133509 RAD51B 0 . . . 3.21 85.17 29 5.48 No 29 0 No 0 0 No -23 0.31 No 49 61.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41000703 + NM_001164269 RAD51 0 . . . 0.11 80.49 18 6.4 Yes 37 1.23 Yes 0 0 No -34 0.77 Yes 31 35.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190670766 + NM_000534 PMS1 0 . . . 0.33 72.34 33 4.85 No 21 0.44 No 0 0 No -19 0.61 No 37 71.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68352618 + NM_133509 RAD51B 0 . . . 2.81 85.12 32 4.07 No 56 1.32 Yes 0 0 No -26 0.7 Yes 49 64.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152352278 - NM_005431 XRCC2 0 . . . 6.78 78.8 15 5.04 No 15 1.28 Yes 0 0 No -26 0.67 Yes 43 95.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59875627 - NM_032043 BRIP1 0 . . . 7.62 87.52 25 5.39 No 54 1.35 Yes 0 0 No -22 0.81 Yes 47 73.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47638292 + NM_000251 MSH2 0 . . . 4.81 86.17 23 5.83 Yes 74 0.6 No 0 0 No -22 0.86 Yes 20 75.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152356226 - NM_005431 XRCC2 0 . . . 1.06 54.31 27 5.65 Yes 64 2.12 Yes 0 0 No -26 0.75 Yes 11 33.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68775883 + NM_004360 CDH1 0 . . . 0.61 64.5 23 5.92 Yes 69 1.56 Yes 0 0 No -22 0.7 Yes 47 64.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68330294 + NM_133509 RAD51B 0 . . . 7.52 70.6 48 7.28 Yes 59 1.11 Yes 0 0 No -26 0.41 No 43 85.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69151110 + NM_133509 RAD51B 0 . . . 5.3 74.72 22 5.63 Yes 22 0.53 No 0 0 No -21 0.75 Yes 48 82.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152367002 - NM_005431 XRCC2 0 . . . 5.35 77.91 30 4.45 No 34 1.75 Yes 0 0 No -29 0.68 Yes 24 88.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68538147 + NM_133509 RAD51B 0 . . . 5.13 80.88 23 5 No 10 0.48 No 0 0 No -28 0.32 No 47 47.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190741791 + NM_000534 PMS1 0 . . . 8.72 80.09 24 5.42 No 30 1.27 Yes 0 0 No -32 0.64 No 24 63.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33435546 - NM_002878 RAD51D 0 . . . 4.79 66.2 33 5.8 Yes 70 -3.08 No 0 0 No -23 0.56 No 37 70.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56789147 + NM_058216 RAD51C 0 . . . 3.72 80.23 12 4.94 No 72 0.36 No 0 0 No -55 0.72 Yes 51 38.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68483443 + NM_133509 RAD51B 0 . . . 1.85 66.82 25 4.02 No 35 1.55 Yes 0 0 No -24 0.79 Yes 49 38.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190732889 + NM_000534 PMS1 0 . . . 2.19 56.61 66 7.95 Yes -3 0.32 No 0 0 No -23 0.51 No 27 50.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59757708 - NM_032043 BRIP1 0 . . . 10.23 86.79 13 5.29 No 54 0.35 No 0 0 No -30 0.59 No 39 50.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40994834 + NM_001164269 RAD51 0 . . . 1.14 80.89 22 6.35 Yes 33 1.31 Yes 0 0 No -21 0.96 Yes 25 47.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37036394 + NM_000249 MLH1 0 . . . 8.96 88.62 54 5.67 Yes 9 1.44 Yes 0 0 No -36 0.86 Yes 49 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108200005 + NM_000051 ATM 0 . . . 4.46 83.91 23 4.18 No 7 0.57 No 0 0 No -20 0.6 No 46 63.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68581137 + NM_133509 RAD51B 0 . . . 3.28 65.42 25 3.96 No 28 2.15 Yes 0 0 No -54 0.43 No 30 51.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6017465 - NM_000535 PMS2 0 . . . 2.84 69.72 34 6.71 Yes 61 1.07 Yes 0 0 No -33 0.36 No 49 41.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105209713 + NM_021930 RINT1 0 . . . 7.49 86.52 24 5.61 Yes 54 0.84 Yes 0 0 No -26 0.56 No 47 57.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68415723 + NM_133509 RAD51B 0 . . . 0.45 53.02 24 5.39 No 75 0.19 No 0 0 No -23 0.89 Yes 39 64.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90990485 - NM_002485 NBN 0 . . . 2.06 66.7 27 5.2 No 75 0.67 No 0 0 No -26 0.64 No 39 48.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108174524 + NM_000051 ATM 0 . . . 1.98 63.4 26 5.66 Yes 63 0.32 No 0 0 No -23 0.65 No 58 28.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68628041 + NM_133509 RAD51B 0 . . . 1.82 73.04 16 4.54 No 71 0.08 No 0 0 No -26 0.47 No 46 76.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215599356 - NM_000465 BARD1 0 . . . 6.12 81.91 27 6.58 Yes 41 0.45 No 0 0 No -26 0.9 Yes 52 92.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190688404 + NM_000534 PMS1 0 . . . 5.83 96.79 26 6.21 Yes 7 0.2 No 0 0 No -25 0.58 No 43 67.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47715181 + NM_000251 MSH2 0 . . . 2.35 69.95 21 5.63 Yes 76 1.36 Yes 0 0 No -20 0.76 Yes 47 43.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59803296 - NM_032043 BRIP1 0 . . . 0.03 71.01 20 5.46 No 45 0.69 No 0 0 No -19 0.58 No 44 81.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69110656 + NM_133509 RAD51B 0 . . . 3.87 85.7 29 4.5 No 4 0.7 No 0 0 No -24 0.79 Yes 50 57.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68512820 + NM_133509 RAD51B 0 . . . 0.09 0 16 4.36 No 33 -1.57 No 0 0 No -15 0.84 Yes 52 91.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68554011 + NM_133509 RAD51B 0 . . . 0.25 60.1 49 8.71 Yes 49 1.11 Yes 0 0 No -27 0.37 No 60 19.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56785561 + NM_058216 RAD51C 0 . . . 5.36 85.96 15 5.2 No 57 1.21 Yes 0 0 No -14 0.53 No 49 85.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131929040 + NM_005732 RAD50 0 . . . 1.5 0 32 7.55 Yes 65 1.47 Yes 0 0 No -31 0.84 Yes 45 74.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37045294 + NM_000249 MLH1 0 . . . 3.02 76.01 75 8.18 Yes 35 0.26 No 0 0 No -38 0.56 No 33 55.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104170790 - NM_001100119 XRCC3 0 . . . 0.09 76.63 17 5.15 No 67 -4.91 No 0 0 No -28 0.4 No 55 41.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69062723 + NM_133509 RAD51B 0 . . . 4.64 74.6 16 6.86 Yes 69 0.96 Yes 0 0 No -26 0.3 No 48 70.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37040520 + NM_000249 MLH1 0 . . . 5.26 70.44 26 5.29 No 23 1.94 Yes 0 0 No -25 0.82 Yes 35 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68846829 + NM_004360 CDH1 0 . . . 1.5 77.71 28 5.36 No 22 -2.6 No 0 0 No -25 0.58 No 36 59.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47732214 + NM_000251 MSH2 0 . . . 2.57 60.04 40 7.21 Yes 44 0.72 No 0 0 No -39 0.31 No 42 85.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131914456 + NM_005732 RAD50 0 . . . 5.92 82.31 14 7.68 Yes 60 1.22 Yes 0 0 No -44 0.39 No 39 40.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68654364 + NM_133509 RAD51B 0 . . . 2.97 68.23 29 4.44 No 67 -4.8 No 0 0 No -28 0.93 Yes 63 18.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215604268 - NM_000465 BARD1 0 . . . 8.18 82.72 47 7.07 Yes 70 0.8 Yes 0 0 No -46 0.81 Yes 40 79.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215669215 - NM_000465 BARD1 0 . . . 3.64 74.35 39 6.24 Yes 47 -4.79 No 0 0 No -38 0.82 Yes 48 94.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59872312 - NM_032043 BRIP1 0 . . . 9.8 89.43 20 5.8 Yes 52 1.59 Yes 0 0 No -19 0.7 Yes 47 75.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108156483 + NM_000051 ATM 0 . . . 0.7 75.58 33 6.58 Yes 11 0.18 No 0 0 No -32 0.72 Yes 47 81.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59897177 - NM_032043 BRIP1 0 . . . 3.53 71.52 24 6.82 Yes 24 0.5 No 0 0 No -23 0.46 No 36 67.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89714835 + NM_000314 PTEN 0 . . . 0.99 0 18 4.12 No 36 0.4 No 0 0 No -17 0.57 No 52 61.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190684116 + NM_000534 PMS1 0 . . . 4.61 80.35 16 3.87 No 74 0.66 No 0 0 No -43 0.56 No 51 45.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68608460 + NM_133509 RAD51B 0 . . . 1.54 70.13 19 4.8 No 47 1 Yes 0 0 No -18 0.7 Yes 33 58.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33440750 - NM_002878 RAD51D 0 . . . 0.35 61.13 34 6.71 Yes 74 0.35 No 0 0 No -33 0.91 Yes 19 42.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68865561 + NM_004360 CDH1 0 . . . 1.08 84.22 34 8.54 Yes 33 1.14 Yes 0 0 No -37 0.57 No 50 58.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32931132 + NM_000059 BRCA2 0 . . . 2.57 73.48 12 5.74 Yes 49 0.82 Yes 0 0 No -45 0.45 No 53 69.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89727362 + NM_000314 PTEN 0 . . . 4.88 79.98 28 7.25 Yes 30 0.29 No 0 0 No -31 0.71 Yes 42 53.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68377924 + NM_133509 RAD51B 0 . . . 9.45 81.19 42 10.06 Yes 22 0.2 No 0 0 No -41 0.63 No 45 85.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1225316 + NM_000455 STK11 0 . . . 3.89 84.17 34 4.91 No 47 1.59 Yes 0 0 No -34 0.43 No 11 76.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47795413 + NM_000251 MSH2 0 . . . 8.7 80.98 15 5 No 2 0.66 No 0 0 No -19 0.33 No 45 58.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56805863 + NM_058216 RAD51C 0 . . . 0.81 67.99 19 5 No 62 1.3 Yes 0 0 No -18 0.58 No 39 86.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59821314 - NM_032043 BRIP1 0 . . . 3.09 67.3 29 5.79 Yes 51 -3.66 No 0 0 No -28 0.83 Yes 35 75.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59767266 - NM_032043 BRIP1 0 . . . 1.51 80.65 10 7.28 Yes 33 1.12 Yes 0 0 No -31 0.44 No 50 81.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68341119 + NM_133509 RAD51B 0 . . . 3.96 71.4 21 5.07 No 1 0.38 No 0 0 No -20 0.83 Yes 46 66.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41210097 - NM_007294 BRCA1 0 . . . 0.92 74.52 42 6.63 Yes 61 0.79 Yes 0 0 No -41 0.51 No 47 61.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68312707 + NM_133509 RAD51B 0 . . . 8.55 86.77 18 4.73 No 54 0.82 Yes 0 0 No -24 0.87 Yes 46 81.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68824254 + NM_133509 RAD51B 0 . . . 5.36 86.26 24 5.48 No 73 1.39 Yes 0 0 No -23 0.77 Yes 45 64.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21973268 - NM_000077 CDKN2A 0 . . . 1.69 57.11 17 6.93 Yes 63 -5.6 No 0 0 No -27 0.45 No 41 32.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47741176 + NM_000251 MSH2 0 . . . 6.49 84.95 53 7.8 Yes 54 0.44 No 0 0 No -35 0.89 Yes 42 31.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29108415 - NM_001005735 CHEK2 0 . . . 1.67 78 30 6.17 Yes 42 0.65 No 0 0 No -25 0.65 No 59 32.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47686397 + NM_000251 MSH2 0 . . . 7.99 84.29 28 5.49 No 2 0.12 No 0 0 No -31 0.77 Yes 33 54.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47718926 + NM_000251 MSH2 0 . . . 3.87 76.35 22 3.66 No 66 0.46 No 0 0 No -21 0.92 Yes 42 40.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59784953 - NM_032043 BRIP1 0 . . . 4.16 75.88 15 5.1 No 31 -4.04 No 0 0 No -19 0.77 Yes 52 36.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215607176 - NM_000465 BARD1 0 . . . 3.65 75.68 22 7.3 Yes 66 0.03 No 0 0 No -22 0.62 No 43 49.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68407696 + NM_133509 RAD51B 0 . . . 3.58 74.33 21 5.83 Yes 73 1.44 Yes 0 0 No -20 0.74 Yes 23 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23649828 - NM_024675 PALB2 0 . . . 3.76 79.95 24 5.29 No 50 0.59 No 0 0 No -23 0.89 Yes 43 52.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68342641 + NM_133509 RAD51B 0 . . . 3.52 77.39 15 4 No 30 1.02 Yes 0 0 No -30 0.49 No 28 71.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68792179 + NM_004360 CDH1 0 . . . 3.49 69.44 20 5.81 Yes 29 -2.92 No 0 0 No -19 0.89 Yes 49 13.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108167140 + NM_000051 ATM 0 . . . 2.98 68.84 38 7 Yes 47 0.69 No 0 0 No -37 0.88 Yes 48 80.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89712385 + NM_000314 PTEN 0 . . . 1.71 0 14 5.23 No 56 -3.35 No 0 0 No -13 0.39 No 46 70.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21972055 - NM_000077 CDKN2A 0 . . . 1.54 69.47 17 4.58 No 24 1.2 Yes 0 0 No -19 0.46 No 38 72.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68579084 + NM_133509 RAD51B 0 . . . 7.22 83.08 13 4.72 No 48 0.84 Yes 0 0 No -22 0.75 Yes 48 80.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69093329 + NM_133509 RAD51B 0 . . . 3.73 81.41 30 5.36 No 62 0.53 No 0 0 No -29 0.38 No 49 91.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7571111 - NM_000546 TP53 0 . . . 2.22 75.39 39 7.03 Yes 72 -4.32 No 0 0 No -38 0.65 No 51 20.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6023420 - NM_000535 PMS2 0 . . . 2.29 68.39 11 5 No 47 0.65 No 0 0 No -18 0.48 No 42 49.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90975240 - NM_002485 NBN 0 . . . 5.76 81 34 6.97 Yes 68 0.49 No 0 0 No -24 0.47 No 52 55.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41206119 - NM_007294 BRCA1 0 . . . 8.64 89.35 9 5.48 No 29 -2.55 No 0 0 No -15 0.23 No 42 75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68824127 + NM_004360 CDH1 0 . . . 7.21 84.26 36 6.65 Yes 58 -3.94 No 0 0 No -29 0.62 No 49 56.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23620832 - NM_024675 PALB2 0 . . . 3.7 69.27 35 6.56 Yes 68 -2.27 No 0 0 No -34 0.84 Yes 45 89.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68319739 + NM_133509 RAD51B 0 . . . 3.73 66.99 43 8.6 Yes 11 0.58 No 0 0 No -42 0.93 Yes 43 71.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89625973 + NM_000314 PTEN 0 . . . 2.14 66.57 33 6.74 Yes 62 0.11 No 0 0 No -24 0.75 Yes 35 71.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68824229 + NM_133509 RAD51B 0 . . . 4.41 77.12 63 7.28 Yes 48 1.38 Yes 0 0 No -22 0.74 Yes 45 44.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190687928 + NM_000534 PMS1 0 . . . 2.87 61.42 30 4.38 No 53 -2.48 No 0 0 No -23 0.4 No 39 33.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47757999 + NM_000251 MSH2 0 . . . 3.6 79.75 16 5.2 No 33 -3.35 No 0 0 No -15 0.42 No 50 60.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68726675 + NM_133509 RAD51B 0 . . . 1.36 79.76 38 6.48 Yes 25 -1.33 No 0 0 No -24 0.75 Yes 50 28.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69064176 + NM_133509 RAD51B 0 . . . 1.53 67.82 21 5.05 No 47 0.27 No 0 0 No -20 0.66 Yes 40 50.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41217322 - NM_007294 BRCA1 0 . . . 3.12 68.34 18 5.39 No 63 0.56 No 0 0 No -17 0.53 No 46 41.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29103507 - NM_001005735 CHEK2 0 . . . 3.19 68.31 14 3.97 No 42 0.79 Yes 0 0 No -27 0.73 Yes 42 91.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215606843 - NM_000465 BARD1 0 . . . 7.22 78.29 18 4.9 No 3 0.81 Yes 0 0 No -37 0.36 No 39 61.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94174979 - NM_005591 MRE11 0 . . . 3.6 85.02 27 5.74 Yes 4 1.2 Yes 0 0 No -45 0.76 Yes 45 59.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47755603 + NM_000251 MSH2 0 . . . 0.62 0 29 5.26 No 52 0.21 No 0 0 No -22 0.4 No 31 47.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23622190 - NM_024675 PALB2 0 . . . 4.36 78.03 26 4.94 No 9 1.22 Yes 0 0 No -25 0.63 No 49 88.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47668842 + NM_000251 MSH2 0 . . . 1.5 83.75 26 5.57 Yes 61 2.33 Yes 0 0 No -25 0.55 No 47 56.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68783828 + NM_004360 CDH1 0 . . . 1.41 77.04 47 7.08 Yes 28 0.56 No 0 0 No -25 0.81 Yes 39 78.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89694957 + NM_000314 PTEN 0 . . . 4.9 72.9 17 5.97 Yes 48 0.76 No 0 0 No -20 0.76 Yes 47 80.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68844740 + NM_004360 CDH1 0 . . . 0.92 76.63 9 4.9 No 58 -3.88 No 0 0 No -20 0.68 Yes 48 69.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68803620 + NM_133509 RAD51B 0 . . . 0.9 73.03 25 4.74 No 58 1.98 Yes 0 0 No -25 0.62 No 50 80.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68995726 + NM_133509 RAD51B 0 . . . 7.21 82.67 61 7.35 Yes 17 0.3 No 0 0 No -41 0.77 Yes 41 94.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68711848 + NM_133509 RAD51B 0 . . . 9.07 82.1 27 4.99 No 45 1.23 Yes 0 0 No -22 0.81 Yes 25 76.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94195290 - NM_005591 MRE11 0 . . . 8.98 80.58 19 4.37 No 24 1.19 Yes 0 0 No -18 0.82 Yes 34 96.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47731023 + NM_000251 MSH2 0 . . . 5.56 90.51 16 4.81 No 47 1.26 Yes 0 0 No -28 0.81 Yes 47 83.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215640048 - NM_000465 BARD1 0 . . . 1.38 69.31 30 5.57 Yes 68 1.66 Yes 0 0 No -29 0.77 Yes 59 15.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21990601 - NM_000077 CDKN2A 0 . . . 5.99 63.32 18 5.38 No 45 1.46 Yes 0 0 No -17 0.49 No 13 64.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68647953 + NM_133509 RAD51B 0 . . . 0.06 0 18 5.22 No -2 0.59 No 0 0 No -33 0.25 No 60 38.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68341286 + NM_133509 RAD51B 0 . . . 1.73 70.08 22 4.06 No 38 -4.11 No 0 0 No -21 0.46 No 46 31.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68715932 + NM_133509 RAD51B 0 . . . 3.69 81.13 13 5.29 No 45 0.78 Yes 0 0 No -25 0.65 No 45 57.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68408104 + NM_133509 RAD51B 0 . . . 1.07 77.87 48 8.12 Yes 20 1.52 Yes 0 0 No -26 0.89 Yes 48 71.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108234144 + NM_000051 ATM 0 . . . 6.06 78.49 35 5.7 Yes 10 1.45 Yes 0 0 No -25 0.62 No 48 86.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68866432 + NM_133509 RAD51B 0 . . . 4.13 71.49 20 4.19 No 66 0.66 No 0 0 No -19 0.85 Yes 43 64.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37038278 + NM_000249 MLH1 0 . . . 5.34 66.69 32 3.81 No 69 -2.58 No 0 0 No -60 0.34 No 46 75.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131976605 + NM_005732 RAD50 0 . . . 2.32 63.36 35 6.4 Yes 5 0.45 No 0 0 No -34 0.75 Yes 53 66.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131922791 + NM_005732 RAD50 0 . . . 4.78 87.23 41 5.89 Yes 17 1.35 Yes 0 0 No -33 0.71 Yes 41 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59918514 - NM_032043 BRIP1 0 . . . 3.82 63.96 50 7.83 Yes 60 1.08 Yes 0 0 No -23 0.41 No 51 69.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68367009 + NM_133509 RAD51B 0 . . . 3.77 71.14 26 5.66 Yes 50 1.04 Yes 0 0 No -25 0.89 Yes 46 59.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131916683 + NM_005732 RAD50 0 . . . 0.97 62.44 28 6.48 Yes 58 -2.47 No 0 0 No -27 0.49 No 40 44.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68351386 + NM_133509 RAD51B 0 . . . 7.33 73.27 30 6.29 Yes 32 1.93 Yes 0 0 No -29 0.69 Yes 26 85.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68610265 + NM_133509 RAD51B 0 . . . 5.18 78.1 18 4.89 No 47 0.66 No 0 0 No -17 0.39 No 38 75.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68530339 + NM_133509 RAD51B 0 . . . 2.33 74.78 33 5.83 Yes 53 0.64 No 0 0 No -27 0.62 No 50 77.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152346874 - NM_005431 XRCC2 0 . . . 3.29 82.3 43 4.92 No 4 1.89 Yes 0 0 No -26 0.8 Yes 46 88.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47735623 + NM_000251 MSH2 0 . . . 2.92 76.93 35 5.92 Yes 39 1.7 Yes 0 0 No -34 0.78 Yes 48 47.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94154097 - NM_005591 MRE11 0 . . . 4.42 84.22 40 7.04 Yes 33 0.98 Yes 0 0 No -25 0.44 No 50 90.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89685080 + NM_000314 PTEN 0 . . . 1.16 66.13 28 5.29 No 46 0.6 No 0 0 No -48 0.62 No 41 48.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68566947 + NM_133509 RAD51B 0 . . . 4.75 78.6 28 5.66 Yes 12 0.43 No 0 0 No -27 0.89 Yes 46 95.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41223690 - NM_007294 BRCA1 0 . . . 4.51 69.97 20 5.08 No 33 0.64 No 0 0 No -19 0.56 No 49 62.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32906888 + NM_000059 BRCA2 0 . . . 4.92 70.98 14 6 Yes 72 0.86 Yes 0 0 No -29 0.6 No 50 76.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48007769 + NM_000179 MSH6 0 . . . 0.49 65.97 51 6.76 Yes 2 0.11 No 0 0 No -44 0.46 No 56 28.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32969964 + NM_000059 BRCA2 0 . . . 4.74 69.62 16 5.48 No 1 1.22 Yes 0 0 No -23 0.5 No 39 52.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131913827 + NM_005732 RAD50 0 . . . 8.88 91.42 35 5.4 No 2 1.28 Yes 0 0 No -24 0.73 Yes 43 62.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89725658 + NM_000314 PTEN 0 . . . 6.12 74.52 22 4.15 No 19 0.77 Yes 0 0 No -22 0.52 No 39 90.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47698300 + NM_000251 MSH2 0 . . . 1.36 74.15 17 4.36 No 58 0.94 Yes 0 0 No -28 0.58 No 45 64.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190728000 + NM_000534 PMS1 0 . . . 0.3 84.41 20 3.47 No 75 0.64 No 0 0 No -24 0.64 No 23 43.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68303392 + NM_133509 RAD51B 0 . . . 1.75 81.47 44 6.78 Yes 34 1.23 Yes 0 0 No -30 0.63 No 24 58.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108145743 + NM_000051 ATM 0 . . . 2.14 0 28 5.29 No 1 1.07 Yes 0 0 No -27 0.48 No 25 25.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47670143 + NM_000251 MSH2 0 . . . 0.83 70.28 28 5.48 No 72 0.91 Yes 0 0 No -27 0.67 Yes 44 23.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68622121 + NM_133509 RAD51B 0 . . . 1.23 74.73 29 5.85 Yes 35 1.07 Yes 0 0 No -28 0.71 Yes 23 77.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68656428 + NM_133509 RAD51B 0 . . . 4.15 84 21 4.69 No 2 0.76 No 0 0 No -23 0.51 No 46 74.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68739802 + NM_133509 RAD51B 0 . . . 0.86 73.09 38 6.32 Yes 10 0.02 No 0 0 No -29 0.67 Yes 48 61.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32947313 + NM_000059 BRCA2 0 . . . 2.24 80.12 27 4.9 No 63 1.37 Yes 0 0 No -29 0.41 No 51 84.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190665363 + NM_000534 PMS1 0 . . . 6.77 72.85 13 4.21 No -1 0.22 No 0 0 No -43 0.76 Yes 48 46.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68667556 + NM_133509 RAD51B 0 . . . 7.38 85.86 26 5.11 No 8 1.25 Yes 0 0 No -46 0.66 No 50 69.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56785929 + NM_058216 RAD51C 0 . . . 5.11 68.61 48 6.6 Yes 4 0.66 No 0 0 No -47 0.63 No 36 93.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23629130 - NM_024675 PALB2 0 . . . 5.85 84.66 18 4.9 No 9 0.31 No 0 0 No -39 0.65 No 43 80.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41262369 - NM_007294 BRCA1 0 . . . 7.05 76.43 26 5.2 No 6 1.46 Yes 0 0 No -25 0.96 Yes 39 62.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108144935 + NM_000051 ATM 0 . . . 3.2 72.59 23 5.56 Yes 16 1.28 Yes 0 0 No -31 0.57 No 42 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215669718 - NM_000465 BARD1 0 . . . 2.7 80.12 15 5.83 Yes 7 1.18 Yes 0 0 No -27 0.56 No 51 68.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52440305 - NM_004656 BAP1 0 . . . 1.32 72.92 33 6.24 Yes 51 -3.95 No 0 0 No -32 0.3 No 38 34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94157566 - NM_005591 MRE11 0 . . . 6.21 81.11 27 5.74 Yes 5 1.55 Yes 0 0 No -29 0.76 Yes 49 69.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1204455 + NM_000455 STK11 0 . . . 3.2 78.69 22 4.68 No 55 0.78 Yes 0 0 No -21 0.54 No 38 26.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47633270 + NM_000251 MSH2 0 . . . 0.98 83.78 24 5.93 Yes 48 0.93 Yes 0 0 No -24 0.75 Yes 41 95.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190684863 + NM_000534 PMS1 0 . . . 7.29 81.58 62 8.75 Yes -2 0.2 No 0 0 No -25 0.63 No 49 66.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84382632 - NM_139076 FAM175A 0 . . . 3.54 74.85 27 6.17 Yes 60 0.95 Yes 0 0 No -26 0.67 Yes 47 46.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108110669 + NM_000051 ATM 0 . . . 2.89 71.87 16 4.31 No 37 1.13 Yes 0 0 No -24 0.17 No 46 50.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68438437 + NM_133509 RAD51B 0 . . . 7.59 70.25 49 8.82 Yes 15 1.31 Yes 0 0 No -48 0.37 No 43 81.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47742080 + NM_000251 MSH2 0 . . . 5.43 70.61 28 4.13 No 17 0.64 No 0 0 No -27 0.79 Yes 41 88.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68777287 + NM_004360 CDH1 0 . . . 4.56 83.28 19 5.48 No NA NA NA 0 0 No -18 0.72 Yes 11 11.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68307837 + NM_133509 RAD51B 0 . . . 3.96 74.17 27 5.2 No 70 0.77 Yes 0 0 No -53 0.5 No 46 52.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68738773 + NM_133509 RAD51B 0 . . . 9.03 76.83 22 6.12 Yes -4 0.05 No 0 0 No -21 0.98 Yes 47 51.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41208956 - NM_007294 BRCA1 0 . . . 3.4 67.39 26 5.01 No 67 1.81 Yes 0 0 No -25 0.65 No 47 62.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108228630 + NM_000051 ATM 0 . . . 7.85 77.57 37 6.08 Yes 17 0.72 No 0 0 No -30 0.36 No 41 44.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69091187 + NM_133509 RAD51B 0 . . . 2.74 74.44 57 8.37 Yes 62 -4.37 No 0 0 No -23 0.96 Yes 43 43.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131971401 + NM_005732 RAD50 0 . . . 0.73 58.37 19 7.07 Yes 25 0.23 No 0 0 No -18 0.66 No 56 52.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32941324 + NM_000059 BRCA2 0 . . . 3.36 69.56 18 4.47 No -4 0.34 No 0 0 No -26 0.49 No 32 33.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68300218 + NM_133509 RAD51B 0 . . . 0.72 53.38 21 4.12 No 22 -2.77 No 0 0 No -27 0.46 No 45 85.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68769701 + NM_133509 RAD51B 0 . . . 0.45 0 17 5.42 No 12 -2.94 No 0 0 No -16 0.63 No 37 72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32961169 + NM_000059 BRCA2 0 . . . 6.76 84.44 32 5.74 Yes 49 0.81 Yes 0 0 No -52 0.45 No 44 68.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59766387 - NM_032043 BRIP1 0 . . . 1.8 66.71 31 5.77 Yes 26 -2.31 No 0 0 No -22 0.94 Yes 41 42.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68728478 + NM_133509 RAD51B 0 . . . 4.02 73.74 21 5.14 No 31 0.61 No 0 0 No -24 0.64 No 36 84.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47741388 + NM_000251 MSH2 0 . . . 6.14 87.49 22 5.93 Yes 10 0.72 No 0 0 No -21 0.66 No 48 77.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94218214 - NM_005591 MRE11 0 . . . 4.5 85.02 37 7.09 Yes 72 -2.8 No 0 0 No -36 0.69 Yes 42 58.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69109397 + NM_133509 RAD51B 0 . . . 11.77 82.23 23 5.39 No 59 0.93 Yes 0 0 No -22 0.79 Yes 50 70.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190695183 + NM_000534 PMS1 0 . . . 0.14 0 28 4.95 No 49 1.14 Yes 0 0 No -20 0.54 No 39 83.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47709308 + NM_000251 MSH2 0 . . . 2.21 66.9 17 5.29 No 36 0.18 No 0 0 No -16 0.42 No 45 55.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89685692 + NM_000314 PTEN 0 . . . 8.62 80.76 25 6.11 Yes 51 1.22 Yes 0 0 No -30 0.65 No 45 41.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23634000 - NM_024675 PALB2 0 . . . 2.88 73.9 50 7.74 Yes 66 0.37 No 0 0 No -30 0.54 No 41 66.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68581996 + NM_133509 RAD51B 0 . . . 0.65 78.44 33 7.35 Yes 43 0.34 No 0 0 No -32 0.32 No 48 48.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68695275 + NM_133509 RAD51B 0 . . . 5.78 83.77 50 8.42 Yes 3 0.46 No 0 0 No -33 0.57 No 46 74.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90991544 - NM_002485 NBN 0 . . . 6.35 77.36 30 6 Yes 9 1.03 Yes 0 0 No -29 0.63 No 49 52.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33436218 - NM_002878 RAD51D 0 . . . 0.14 65.39 19 3.6 No 6 0.04 No 0 0 No -23 0.78 Yes 36 36.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90970145 - NM_002485 NBN 0 . . . 1.23 61.35 17 5.38 No 24 0.26 No 0 0 No -25 0.81 Yes 25 47.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6042679 - NM_000535 PMS2 0 . . . 3.68 70.85 25 5.49 No 13 0.79 Yes 0 0 No -28 0.71 Yes 45 84.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94224368 - NM_005591 MRE11 0 . . . 1.31 74.72 15 4.31 No 74 -5.12 No 0 0 No -21 0.62 No 45 63.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56800147 + NM_058216 RAD51C 0 . . . 0.39 73.47 34 7.49 Yes 49 0.8 Yes 0 0 No -33 0.89 Yes 51 53.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68496783 + NM_133509 RAD51B 0 . . . 2.17 68.62 28 5.29 No 56 0.35 No 0 0 No -27 0.61 No 49 77.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68396418 + NM_133509 RAD51B 0 . . . 4.34 75.02 21 4.55 No 68 1.81 Yes 0 0 No -26 0.56 No 45 67.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59879275 - NM_032043 BRIP1 0 . . . 0.44 61.6 28 4.97 No 44 1.49 Yes 0 0 No -20 0.75 Yes 14 82.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68395661 + NM_133509 RAD51B 0 . . . 5.2 77.12 47 9.32 Yes 14 1.37 Yes 0 0 No -46 0.58 No 44 80.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190684998 + NM_000534 PMS1 0 . . . 3.74 77.52 13 5.1 No 53 0.69 No 0 0 No -19 0.61 No 57 45.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108134774 + NM_000051 ATM 0 . . . 0.3 74.92 13 5.26 No 67 -6.13 No 0 0 No -24 0.79 Yes 52 90.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68443209 + NM_133509 RAD51B 0 . . . 4.2 0 24 4.9 No 62 1.43 Yes 0 0 No -17 0.5 No 25 47.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68398795 + NM_133509 RAD51B 0 . . . 1.72 74.7 45 5.89 Yes 36 -3.98 No 0 0 No -35 0.91 Yes 51 60.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84405723 - NM_139076 FAM175A 0 . . . 4.83 91.34 25 5.29 No 51 1.22 Yes 0 0 No -24 0.92 Yes 47 51.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68717224 + NM_133509 RAD51B 0 . . . 3.37 74.75 15 4.58 No 75 0.39 No 0 0 No -20 0.46 No 44 75.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68366509 + NM_133509 RAD51B 0 . . . 1.98 61.41 48 5.99 Yes 58 1.04 Yes 0 0 No -24 0.4 No 35 62.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68505481 + NM_133509 RAD51B 0 . . . 3.76 78.14 24 7.07 Yes 42 -2.54 No 0 0 No -23 0.39 No 53 66.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68899593 + NM_133509 RAD51B 0 . . . 5.23 81.45 9 6 Yes 41 0.74 No 0 0 No -30 0.42 No 48 85.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68404803 + NM_133509 RAD51B 0 . . . 2.06 71.59 33 6.16 Yes 57 1.08 Yes 0 0 No -32 0.78 Yes 46 65.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68643161 + NM_133509 RAD51B 0 . . . 0.08 65.51 16 5.03 No 44 0.38 No 0 0 No -24 0.94 Yes 48 81.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59843973 - NM_032043 BRIP1 0 . . . 1.15 73.19 45 6.63 Yes 43 1.07 Yes 0 0 No -44 0.8 Yes 48 89.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68589479 + NM_133509 RAD51B 0 . . . 0.13 64.6 42 6.38 Yes 70 0.07 No 0 0 No -34 0.5 No 34 44.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215594343 - NM_000465 BARD1 0 . . . 3.24 77.03 17 5.29 No 19 0.36 No 0 0 No -21 0.74 Yes 43 60.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68621442 + NM_133509 RAD51B 0 . . . 10.57 87.12 18 5.43 No 0 1.25 Yes 0 0 No -27 0.76 Yes 31 67.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94184327 - NM_005591 MRE11 0 . . . 4.17 79.53 14 5.18 No 56 0.69 No 0 0 No -22 0.73 Yes 25 87.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48032784 + NM_000179 MSH6 0 . . . 3.23 70.96 17 5.29 No 33 0.69 No 0 0 No -21 0.54 No 18 78.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47717915 + NM_000251 MSH2 0 . . . 0.14 63.66 20 4.9 No 50 0.29 No 0 0 No -25 0.59 No 58 34.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1209067 + NM_000455 STK11 0 . . . 5.2 81.12 47 7.55 Yes 76 0.85 Yes 0 0 No -28 0.88 Yes 47 77.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6011179 - NM_000535 PMS2 0 . . . 3.64 71.98 26 5.1 No 38 -3.66 No 0 0 No -47 0.71 Yes 55 33.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68290745 + NM_133509 RAD51B 0 . . . 4.02 76.44 12 5.29 No 50 0.35 No 0 0 No -23 0.29 No 45 69.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89732982 + NM_000314 PTEN 0 . . . 2.21 72.36 46 6.48 Yes 44 1.19 Yes 0 0 No -29 0.48 No 35 49.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190667346 + NM_000534 PMS1 0 . . . 1.79 65.2 28 5.19 No -4 0.19 No 0 0 No -27 0.76 Yes 40 81.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68705291 + NM_133509 RAD51B 0 . . . 4.25 65.17 18 4.8 No 61 1.27 Yes 0 0 No -20 0.69 Yes 34 57.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7575705 - NM_000546 TP53 0 . . . 2.79 83 11 5.28 No 34 1.81 Yes 0 0 No -23 0.41 No 34 55.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59904989 - NM_032043 BRIP1 0 . . . 0.24 80.65 22 6.71 Yes 33 1.39 Yes 0 0 No -21 0.97 Yes 25 38.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47720744 + NM_000251 MSH2 0 . . . 8.8 85.96 23 6.24 Yes -4 1.4 Yes 0 0 No -22 0.93 Yes 48 74.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68945040 + NM_133509 RAD51B 0 . . . 0.65 68.2 45 7.52 Yes 61 -4.91 No 0 0 No -26 0.75 Yes 48 85.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89670302 + NM_000314 PTEN 0 . . . 2.33 86.9 17 5.29 No 36 0.87 Yes 0 0 No -16 0.54 No 50 51.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47636713 + NM_000251 MSH2 0 . . . 1.61 74.73 21 7.13 Yes 33 1.15 Yes 0 0 No -20 0.86 Yes 13 53.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68459548 + NM_133509 RAD51B 0 . . . 0.52 76.8 13 5.27 No 21 -3.49 No 0 0 No -21 0.64 No 20 83.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69095885 + NM_133509 RAD51B 0 . . . 3.84 75.22 39 7.08 Yes 21 0.59 No 0 0 No -36 0.37 No 37 81.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215589661 - NM_000465 BARD1 0 . . . 0.76 0 13 5.38 No 33 0.85 Yes 0 0 No -23 0.85 Yes 56 38.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68806293 + NM_133509 RAD51B 0 . . . 6.54 84.46 27 4.34 No 12 0 No 0 0 No -20 0.53 No 46 96.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89628161 + NM_000314 PTEN 0 . . . 0.35 64.86 28 5.29 No 69 0.23 No 0 0 No -27 0.81 Yes 48 30.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68523890 + NM_133509 RAD51B 0 . . . 0.53 62.47 26 6.32 Yes 37 -3.93 No 0 0 No -25 0.86 Yes 44 71.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108164108 + NM_000051 ATM 0 . . . 1.93 61.23 27 5.2 No 70 -6.49 No 29 0.51 Yes -56 0.32 No 44 49.5 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 59806229 - NM_032043 BRIP1 0 . . . 3.6 0 92 9.63 Yes 45 0.32 No 0 0 No -28 0.83 Yes 51 87.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68444967 + NM_133509 RAD51B 0 . . . 2.73 78.18 16 5.41 No 69 0.64 No 0 0 No -26 0.57 No 49 81.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59836362 - NM_032043 BRIP1 0 . . . 5.88 92.07 22 5.29 No 37 0.89 Yes 0 0 No -19 0.69 Yes 43 43.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215649443 - NM_000465 BARD1 0 . . . 2.54 67.15 16 5.1 No 21 0.92 Yes 0 0 No -24 0.47 No 46 78.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68576819 + NM_133509 RAD51B 0 . . . 0.51 69.69 17 4.58 No 74 -5.6 No 0 0 No -21 0.34 No 23 53.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69045793 + NM_133509 RAD51B 0 . . . 0.04 72.29 30 5.68 Yes 45 -3.67 No 0 0 No -31 0.39 No 63 52.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59809738 - NM_032043 BRIP1 0 . . . 6.03 86.26 20 6.81 Yes 2 0.18 No 0 0 No -19 0.86 Yes 49 63.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079177 + NM_000249 MLH1 0 . . . 2.58 84 42 8.09 Yes 2 1.03 Yes 0 0 No -41 0.83 Yes 56 54.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45801362 - NM_001048171 MUTYH 0 . . . 2.93 73.96 29 5.02 No 9 1.09 Yes 0 0 No -28 0.88 Yes 49 82.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68510220 + NM_133509 RAD51B 0 . . . 3.54 77.91 18 2.7 No 69 -4.2 No 0 0 No -17 0.47 No 44 44.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59929265 - NM_032043 BRIP1 0 . . . 1.14 69.5 31 5.47 No 52 -0.99 No 0 0 No -30 0.8 Yes 50 73.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68776559 + NM_004360 CDH1 0 . . . 3.49 82.31 22 5.18 No 51 -1.62 No 0 0 No -24 0.67 Yes 19 72.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33438558 - NM_002878 RAD51D 0 . . . 5.42 84.17 30 6 Yes 29 1.16 Yes 0 0 No -55 0.47 No 22 55.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108238414 + NM_000051 ATM 0 . . . 5.74 77.05 38 6.96 Yes 74 0.76 No 0 0 No -44 0.37 No 33 92.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68356427 + NM_133509 RAD51B 0 . . . 4.19 81.27 15 4.58 No 60 1 Yes 0 0 No -19 0.52 No 41 50.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48026547 + NM_000179 MSH6 0 . . . 2.94 81.31 33 6.57 Yes 26 0.09 No 0 0 No -32 0.93 Yes 50 58.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108121396 + NM_000051 ATM 0 . . . 2.4 55.35 21 5.17 No 61 0.91 Yes 26 0.65 Yes -21 0.62 No 27 45.92 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 68396119 + NM_133509 RAD51B 0 . . . 0.9 0 19 3.67 No 58 0.62 No 0 0 No -39 0.44 No 42 57.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68826262 + NM_133509 RAD51B 0 . . . 2.87 68.98 16 4.61 No -3 0.08 No 0 0 No -37 0.29 No 49 50.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94214468 - NM_005591 MRE11 0 . . . 3.02 0 28 5.25 No 14 1.03 Yes 0 0 No -27 0.73 Yes 44 45.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190653410 + NM_000534 PMS1 0 . . . 4.26 73.29 38 5.37 No 8 0.49 No 0 0 No -27 0.65 No 47 70.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68540483 + NM_133509 RAD51B 0 . . . 5.34 70.98 79 9.18 Yes 18 0.21 No 0 0 No -22 0.76 Yes 44 50.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89717269 + NM_000314 PTEN 0 . . . 2.08 74.78 27 5.24 No 66 0.8 Yes 0 0 No -26 0.42 No 45 68.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41262261 - NM_007294 BRCA1 0 . . . 2.48 0 20 4.51 No 6 0.11 No 0 0 No -32 0.7 Yes 46 59.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68981695 + NM_133509 RAD51B 0 . . . 5.13 74.69 18 4.58 No 13 0.77 No 0 0 No -22 0.64 No 45 71.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47752717 + NM_000251 MSH2 0 . . . 2.84 79.36 33 5.66 Yes 52 -1.14 No 0 0 No -32 0.88 Yes 49 39.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68935950 + NM_133509 RAD51B 0 . . . 4.33 76.46 34 7.78 Yes 61 0.59 No 0 0 No -33 0.59 No 35 78.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68628574 + NM_133509 RAD51B 0 . . . 0.93 78.33 13 3.87 No 12 0.75 No 0 0 No -25 0.89 Yes 33 41.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59854787 - NM_032043 BRIP1 0 . . . 1.65 85.54 23 3.75 No 27 1.19 Yes 0 0 No -22 0.77 Yes 53 71.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68856151 + NM_133509 RAD51B 0 . . . 2.56 75.17 36 5.11 No 6 0.38 No 0 0 No -31 0.8 Yes 38 89.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41012934 + NM_001164269 RAD51 0 . . . 0.35 73.27 15 4.36 No 74 -2.1 No 0 0 No -35 0.44 No 39 28.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90981449 - NM_002485 NBN 0 . . . 2.17 65.61 25 4.59 No 33 1.28 Yes 0 0 No -24 0.54 No 42 84.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68972931 + NM_133509 RAD51B 0 . . . 5.77 81.69 17 5.83 Yes 5 1.1 Yes 0 0 No -27 0.36 No 48 76.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69083918 + NM_133509 RAD51B 0 . . . 7.56 80.31 24 4.54 No 62 0.65 No 0 0 No -28 0.48 No 31 75.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47661002 + NM_000251 MSH2 0 . . . 0.53 67.96 25 5.56 Yes 46 -0.82 No 0 0 No -24 0.93 Yes 52 69.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59835291 - NM_032043 BRIP1 0 . . . 2.81 71.35 33 5.99 Yes 39 0.92 Yes 0 0 No -32 0.49 No 51 44.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68975172 + NM_133509 RAD51B 0 . . . 0.84 0 39 6.4 Yes 73 -2.56 No 0 0 No -38 0.84 Yes 37 68.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68802012 + NM_004360 CDH1 0 . . . 0.7 70.57 15 4.58 No 68 1.08 Yes 0 0 No -57 0.6 No 48 78.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47695559 + NM_000251 MSH2 0 . . . 4.59 73.83 41 7.12 Yes 75 0.84 Yes 0 0 No -23 0.73 Yes 50 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59913148 - NM_032043 BRIP1 0 . . . 6.4 82.49 30 7.09 Yes 48 1.1 Yes 0 0 No -29 0.74 Yes 46 80.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90952019 - NM_002485 NBN 0 . . . 2.56 73.87 33 4.38 No 26 0.76 No 0 0 No -26 0.77 Yes 51 76.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59938018 - NM_032043 BRIP1 0 . . . 2.73 83.86 48 8.36 Yes 16 1.14 Yes 0 0 No -47 0.69 Yes 42 72.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90979389 - NM_002485 NBN 0 . . . 0.06 60.02 20 3.93 No 70 1.92 Yes 0 0 No -24 0.7 Yes 39 84.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215648623 - NM_000465 BARD1 0 . . . 7.7 86.96 26 5.48 No 32 0.24 No 0 0 No -25 0.83 Yes 51 73.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131891696 + NM_005732 RAD50 0 . . . 5.33 75.52 22 6.85 Yes 19 1.92 Yes 0 0 No -21 0.97 Yes 39 82.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105201855 + NM_021930 RINT1 0 . . . 4.8 71.97 22 6.92 Yes 47 1.07 Yes 0 0 No -28 0.66 No 43 57.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89679131 + NM_000314 PTEN 0 . . . 2.85 0 38 5.35 No 48 1 Yes 0 0 No -30 0.88 Yes 42 50.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68940727 + NM_133509 RAD51B 0 . . . 3.77 77.04 25 5.2 No 23 1 Yes 0 0 No -24 0.62 No 49 47.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47800879 + NM_000251 MSH2 0 . . . 1.48 85.34 36 6.7 Yes 8 0.05 No 0 0 No -35 0.63 No 50 91.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69008941 + NM_133509 RAD51B 0 . . . 2.24 73.15 17 5.57 Yes 8 0.22 No 0 0 No -57 0.3 No 41 40.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848191 - NM_032043 BRIP1 0 . . . 5.89 73.05 30 5.58 Yes -2 -0.54 No 0 0 No -30 0.81 Yes 38 54.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68803255 + NM_133509 RAD51B 0 . . . 5 67.94 28 5.38 No 20 0.25 No 0 0 No -28 0.39 No 38 77.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47628431 + NM_000251 MSH2 0 . . . 1.79 81.75 31 5.91 Yes 2 1.71 Yes 0 0 No -30 0.93 Yes 12 67.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108195348 + NM_000051 ATM 0 . . . 6.95 74.13 48 7.2 Yes 8 0.47 No 0 0 No -29 0.78 Yes 38 83.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68500660 + NM_133509 RAD51B 0 . . . 7.05 82.8 19 4.19 No 10 0.79 Yes 0 0 No -18 0.91 Yes 48 92.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59881244 - NM_032043 BRIP1 0 . . . 3.69 72.24 30 4.68 No 58 0.89 Yes 0 0 No -29 0.88 Yes 46 49.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6039573 - NM_000535 PMS2 0 . . . 9.13 82.22 31 5.49 No 21 1.24 Yes 0 0 No -25 0.51 No 47 90.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69095137 + NM_133509 RAD51B 0 . . . 4.16 80.72 27 5.29 No 75 1.18 Yes 0 0 No -26 0.38 No 49 43.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131949678 + NM_005732 RAD50 0 . . . 3.34 71.45 17 6.93 Yes 48 -4.65 No 0 0 No -29 0.48 No 43 64.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68392584 + NM_133509 RAD51B 0 . . . 2.14 71.29 11 6.24 Yes 57 -2.32 No 0 0 No -24 0.51 No 44 35.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41271997 - NM_007294 BRCA1 0 . . . 6.89 92.55 44 7.55 Yes 6 0.62 No 0 0 No -38 0.49 No 46 63.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40993593 + NM_001164269 RAD51 0 . . . 2.01 84.41 25 5.29 No 60 2.9 Yes 0 0 No -24 0.83 Yes 15 24.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69068091 + NM_133509 RAD51B 0 . . . 5.2 76.3 14 5.48 No 33 1.69 Yes 0 0 No -25 0.48 No 47 78.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68488493 + NM_133509 RAD51B 0 . . . 3.73 60.38 12 4.24 No 23 1.02 Yes 0 0 No -19 0.73 Yes 35 71.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89699409 + NM_000314 PTEN 0 . . . 6.95 74.76 22 4.56 No 30 0.77 No 0 0 No -30 0.48 No 45 94.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68824729 + NM_133509 RAD51B 0 . . . 7.76 88.22 27 5.2 No 31 0.73 No 0 0 No -26 0.51 No 47 87.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68289800 + NM_133509 RAD51B 0 . . . 3.47 70.71 18 3.82 No 70 1.09 Yes 0 0 No -32 0.7 Yes 48 65.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32973527 + NM_000059 BRCA2 0 . . . 4.77 76.02 17 4.58 No 39 0.41 No 0 0 No -19 0.48 No 44 67.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37081481 + NM_000249 MLH1 0 . . . 6.54 81.94 21 5.19 No 40 1.05 Yes 0 0 No -23 0.46 No 43 69.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68762974 + NM_133509 RAD51B 0 . . . 7.78 81.71 13 4.26 No 73 0.91 Yes 0 0 No -30 0.86 Yes 46 68.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68989127 + NM_133509 RAD51B 0 . . . 2.42 76.7 50 7.21 Yes 70 -2.7 No 0 0 No -27 0.62 No 50 81.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89704738 + NM_000314 PTEN 0 . . . 3.02 71.11 12 4.57 No 17 0.66 No 0 0 No -26 0.63 No 41 67.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1225170 + NM_000455 STK11 0 . . . 5.04 72.93 30 7 Yes NA NA NA 0 0 No -29 0.94 Yes 44 33.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89670365 + NM_000314 PTEN 0 . . . 3.8 81.43 26 5.44 No 4 1.04 Yes 0 0 No -25 0.64 No 54 77.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190658957 + NM_000534 PMS1 0 . . . 1.08 84.22 30 5.57 Yes 27 1.87 Yes 0 0 No -30 0.34 No 25 56.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104170168 - NM_001100119 XRCC3 0 . . . 6.6 76.75 31 5.96 Yes 9 1.02 Yes 0 0 No -37 0.53 No 49 93.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59920931 - NM_032043 BRIP1 0 . . . 3.93 77.6 34 6.32 Yes 15 -3.01 No 0 0 No -30 0.48 No 48 71.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68850296 + NM_004360 CDH1 0 . . . 3.77 72.65 36 5.92 Yes 53 0.46 No 0 0 No -35 0.91 Yes 16 37.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131969965 + NM_005732 RAD50 0 . . . 7.24 83.35 15 5.39 No 37 1.18 Yes 0 0 No -22 0.4 No 53 31.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68388932 + NM_133509 RAD51B 0 . . . 5.41 80.92 16 4.69 No 26 1.59 Yes 0 0 No -21 0.38 No 32 80.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89642661 + NM_000314 PTEN 0 . . . 3.31 70.4 22 4.58 No 40 1.21 Yes 0 0 No -34 0.58 No 44 55.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68448214 + NM_133509 RAD51B 0 . . . 0.26 72.74 20 5 No 66 0.62 No 0 0 No -19 0.62 No 46 80.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29139412 - NM_001005735 CHEK2 0 . . . 8.14 76.1 18 4.56 No 1 1.34 Yes 0 0 No -22 0.31 No 44 80.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32923622 + NM_000059 BRCA2 0 . . . 8.73 85.73 50 8.17 Yes 3 0.17 No 0 0 No -44 0.44 No 55 57.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131971495 + NM_005732 RAD50 0 . . . 4.25 73.19 21 5.04 No 0 1.65 Yes 0 0 No -20 0.44 No 44 68.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68904702 + NM_133509 RAD51B 0 . . . 5.95 78.31 15 5.29 No 57 -3.76 No 0 0 No -33 0.57 No 40 42.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6024303 - NM_000535 PMS2 0 . . . 4.65 73.01 34 6.34 Yes 45 0.89 Yes 0 0 No -29 0.9 Yes 39 53.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56811174 + NM_058216 RAD51C 0 . . . 6.5 86.2 31 6.08 Yes 9 1.15 Yes 0 0 No -27 0.59 No 49 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68409620 + NM_133509 RAD51B 0 . . . 1.16 59.12 22 8.25 Yes 54 0.9 Yes 0 0 No -21 0.77 Yes 38 75.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69119075 + NM_133509 RAD51B 0 . . . 7.22 84.17 39 7.38 Yes 12 1.91 Yes 0 0 No -38 0.51 No 46 86.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68673625 + NM_133509 RAD51B 0 . . . 4.71 84.22 81 7.14 Yes 76 1.48 Yes 0 0 No -27 0.65 No 50 87.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68343137 + NM_133509 RAD51B 0 . . . 4.21 85.92 19 5 No 59 1.33 Yes 0 0 No -20 0.35 No 43 95.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94208034 - NM_005591 MRE11 0 . . . 0.31 63.06 14 4.68 No 70 -0.96 No 0 0 No -22 0.67 Yes 45 76.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59854897 - NM_032043 BRIP1 0 . . . 2.03 71.38 15 5.18 No 68 0.38 No 0 0 No -27 0.54 No 39 50.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59867230 - NM_032043 BRIP1 0 . . . 1.42 66.09 10 4 No 75 -6.37 No 0 0 No -29 0.63 No 58 53.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23630244 - NM_024675 PALB2 0 . . . 0.38 68.01 27 5.19 No 0 0.39 No 0 0 No -26 0.66 No 40 55.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69019221 + NM_133509 RAD51B 0 . . . 7.96 84.07 37 7.36 Yes 5 1.19 Yes 0 0 No -24 0.43 No 48 61.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215599174 - NM_000465 BARD1 0 . . . 2.45 0 43 5.22 No 40 1.07 Yes 0 0 No -32 0.69 Yes 57 31.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190709901 + NM_000534 PMS1 0 . . . 5.2 77.56 33 8.1 Yes 67 0.78 Yes 0 0 No -32 0.76 Yes 48 64.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68319538 + NM_133509 RAD51B 0 . . . 9.31 87.6 31 7.89 Yes 4 1.15 Yes 0 0 No -30 0.97 Yes 38 47.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41000582 + NM_001164269 RAD51 0 . . . 2.23 71.34 34 6.86 Yes 40 0.64 No 0 0 No -33 0.77 Yes 54 38.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84401697 - NM_139076 FAM175A 0 . . . 2.68 69.92 24 4.97 No 23 0.72 No 0 0 No -26 0.58 No 35 96.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68624652 + NM_133509 RAD51B 0 . . . 2.13 0 21 4.71 No 23 0.82 Yes 0 0 No -20 0.46 No 35 95.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68828511 + NM_133509 RAD51B 0 . . . 0.95 86.71 20 5.67 Yes 76 1.46 Yes 0 0 No -29 0.67 Yes 25 54.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59912701 - NM_032043 BRIP1 0 . . . 1.16 71.79 22 5.29 No 34 0.04 No 0 0 No -21 0.74 Yes 44 51.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47755147 + NM_000251 MSH2 0 . . . 5.19 83.96 29 5.74 Yes 37 1.35 Yes 0 0 No -28 0.58 No 46 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69045014 + NM_133509 RAD51B 0 . . . 0.26 74.23 15 5.72 Yes 46 1.08 Yes 0 0 No -29 0.38 No 12 46.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68856963 + NM_004360 CDH1 0 . . . 0.33 0 26 4.72 No 56 -4.94 No 0 0 No -25 0.74 Yes 32 30.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108214887 + NM_000051 ATM 0 . . . 2.06 52.33 15 5.88 Yes 14 1.01 Yes 0 0 No -22 0.84 Yes 44 49.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108191268 + NM_000051 ATM 0 . . . 2.93 71.82 21 6 Yes 39 0.56 No 0 0 No -20 0.63 No 39 56.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59921874 - NM_032043 BRIP1 0 . . . 2.15 77.26 27 5.39 No 52 0.68 No 0 0 No -26 0.8 Yes 39 58.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131931710 + NM_005732 RAD50 0 . . . 0.5 83.13 21 4.45 No 32 0.9 Yes 0 0 No -20 0.63 No 26 54.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108095344 + NM_000051 ATM 0 . . . 2.05 70.29 21 5 No 64 1.1 Yes 0 0 No -20 0.94 Yes 42 62.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59929194 - NM_032043 BRIP1 0 . . . 2.43 68.88 22 6.66 Yes 35 -3.66 No 0 0 No -21 0.77 Yes 54 27.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68620172 + NM_133509 RAD51B 0 . . . 5.08 79.64 16 4.69 No 5 0.99 Yes 0 0 No -15 0.49 No 53 53.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47695260 + NM_000251 MSH2 0 . . . 2.59 0 20 4.58 No 70 1.08 Yes 0 0 No -19 0.89 Yes 21 65.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84384461 - NM_139076 FAM175A 0 . . . 2.61 78.23 27 5.39 No 57 0.45 No 0 0 No -57 0.51 No 44 69.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41213731 - NM_007294 BRCA1 0 . . . 2.38 67.3 21 7.86 Yes 55 0.65 No 0 0 No -20 0.83 Yes 52 53.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190719064 + NM_000534 PMS1 0 . . . 4.3 0 21 5.88 Yes 76 0.48 No 0 0 No -20 0.36 No 49 49.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190701768 + NM_000534 PMS1 0 . . . 0.09 0 22 5.29 No 16 0.84 Yes 0 0 No -54 0.59 No 42 67.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68971578 + NM_133509 RAD51B 0 . . . 0.31 69.91 19 4.5 No 46 -3.48 No 0 0 No -19 0.88 Yes 36 70.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75515138 - NM_001040108 MLH3 0 . . . 4.91 87.28 22 4.6 No 23 0.6 No 0 0 No -21 0.94 Yes 50 86.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68290436 + NM_133509 RAD51B 0 . . . 0.19 63.43 13 4.13 No 33 0.93 Yes 0 0 No -22 0.81 Yes 38 43.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68845448 + NM_133509 RAD51B 0 . . . 5.49 77.63 28 4.47 No 39 0.42 No 0 0 No -23 0.43 No 19 77.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75487889 - NM_001040108 MLH3 0 . . . 1.22 73.3 21 4.91 No 17 0.66 No 0 0 No -20 0.62 No 41 36.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69132598 + NM_133509 RAD51B 0 . . . 4.73 78.69 22 5.24 No 23 -0.94 No 0 0 No -21 0.88 Yes 47 63.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108122414 + NM_000051 ATM 0 . . . 0.27 78.88 24 5.2 No 10 0.48 No 0 0 No -23 0.67 Yes 45 55.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68450774 + NM_133509 RAD51B 0 . . . 1.41 84.22 29 5.57 Yes 33 1.13 Yes 0 0 No -28 0.53 No 50 68.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94167013 - NM_005591 MRE11 0 . . . 0.19 66.58 28 5.29 No 70 -5.29 No 0 0 No -27 0.6 No 40 43.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190687566 + NM_000534 PMS1 0 . . . 8.12 79.51 21 5.05 No 39 -2.29 No 0 0 No -45 0.47 No 43 78.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89643729 + NM_000314 PTEN 0 . . . 0.14 58.86 24 5 No 6 0.9 Yes 0 0 No -23 0.76 Yes 48 79.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41212654 - NM_007294 BRCA1 0 . . . 3.91 74.09 14 6.13 Yes 54 0.63 No 0 0 No -25 0.41 No 36 69.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59820120 - NM_032043 BRIP1 0 . . . 3.99 78.77 20 5.1 No 60 0.82 Yes 0 0 No -42 0.23 No 31 81.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68965379 + NM_133509 RAD51B 0 . . . 0.07 0 18 4.9 No 69 -3.77 No 0 0 No -26 0.47 No 54 46.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215674732 - NM_000465 BARD1 0 . . . 3.24 75.36 15 4.52 No NA NA NA 0 0 No -32 0.42 No 49 80.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68674703 + NM_133509 RAD51B 0 . . . 7.87 90.77 18 4.7 No 13 0.87 Yes 0 0 No -26 0.44 No 41 74.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94211063 - NM_005591 MRE11 0 . . . 7.24 81.93 14 5.39 No 57 1.21 Yes 0 0 No -43 0.71 Yes 49 83.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131918706 + NM_005732 RAD50 0 . . . 0.42 73.92 20 4.79 No 5 0.71 No 0 0 No -19 0.28 No 47 66.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33441684 - NM_002878 RAD51D 0 . . . 4.41 84.95 24 5.17 No 35 0.51 No 0 0 No -23 0.57 No 23 51.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68663588 + NM_133509 RAD51B 0 . . . 2.96 84.66 18 5.92 Yes 10 0.03 No 0 0 No -29 0.55 No 52 47.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215607375 - NM_000465 BARD1 0 . . . 8.33 83.13 17 4.8 No 54 0.09 No 0 0 No -22 0.3 No 38 60.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41021887 + NM_001164269 RAD51 0 . . . 4.73 80.56 30 5.36 No 45 -1.79 No 0 0 No -29 0.84 Yes 52 66.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56797170 + NM_058216 RAD51C 0 . . . 0.63 0 32 4.38 No 38 1.46 Yes 0 0 No -31 0.37 No 53 31.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47774918 + NM_000251 MSH2 0 . . . 3.41 85.02 21 4.78 No 31 -1.07 No 0 0 No -20 0.43 No 43 55.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68946077 + NM_133509 RAD51B 0 . . . 0.44 65.31 22 5.2 No 67 -6.08 No 0 0 No -21 0.61 No 39 41.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32888448 + NM_000059 BRCA2 0 . . . 2.08 66.17 16 5.07 No 43 0.27 No 0 0 No -22 0.86 Yes 44 47.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68693733 + NM_133509 RAD51B 0 . . . 5.99 83.26 28 5.73 Yes 2 0.51 No 0 0 No -27 0.72 Yes 49 36.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105180596 + NM_021930 RINT1 0 . . . 2.45 74.02 23 4.76 No 70 0.81 Yes 0 0 No -22 0.62 No 49 76.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190710198 + NM_000534 PMS1 0 . . . 3.59 62.02 25 5.39 No 56 0.24 No 0 0 No -22 0.54 No 35 96.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52443947 - NM_004656 BAP1 0 . . . 1.47 62.06 18 3.86 No 61 0.88 Yes 0 0 No -21 0.58 No 31 79.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41231542 - NM_007294 BRCA1 0 . . . 7.48 83.63 33 5.74 Yes 0 1.12 Yes 0 0 No -47 0.41 No 42 37.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59885274 - NM_032043 BRIP1 0 . . . 6.9 85.63 16 4.61 No 70 0.43 No 0 0 No -21 0.63 No 46 92.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89704786 + NM_000314 PTEN 0 . . . 2.51 76.38 24 4.46 No 65 0.66 No 0 0 No -23 0.97 Yes 42 69.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108105904 + NM_000051 ATM 0 . . . 2.29 66.31 19 5.81 Yes 47 0.64 No 0 0 No -18 0.45 No 45 49.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68863976 + NM_004360 CDH1 0 . . . 1.08 84.22 34 7.75 Yes 30 1.3 Yes 0 0 No -33 0.86 Yes 28 50.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75495167 - NM_001040108 MLH3 0 . . . 2.5 73.73 18 4.9 No 51 -4.53 No 0 0 No -33 0.6 No 47 46.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69123121 + NM_133509 RAD51B 0 . . . 0.73 0 29 5.55 No 9 0.06 No 0 0 No -28 0.93 Yes 41 54.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215621607 - NM_000465 BARD1 0 . . . 1.26 69.51 19 4.33 No 39 0.16 No 0 0 No -52 0.57 No 41 62.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69051915 + NM_133509 RAD51B 0 . . . 3.57 77.84 15 4.55 No -4 0.59 No 0 0 No -29 0.58 No 42 85.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68869766 + NM_133509 RAD51B 0 . . . 5.8 75.03 33 5.3 No 13 -1.56 No 0 0 No -30 0.3 No 45 73.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84382947 - NM_139076 FAM175A 0 . . . 3.08 0 31 5.65 Yes 6 1.25 Yes 0 0 No -30 0.87 Yes 46 44.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29137054 - NM_001005735 CHEK2 0 . . . 3.14 68.95 35 6.08 Yes 16 1.12 Yes 0 0 No -34 0.89 Yes 42 93.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215654647 - NM_000465 BARD1 0 . . . 4.51 82.19 19 5.34 No 3 0.96 Yes 0 0 No -29 0.4 No 46 62.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84388997 - NM_139076 FAM175A 0 . . . 4.76 71.04 21 7.13 Yes 11 1.3 Yes 0 0 No -20 0.79 Yes 47 68.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69088352 + NM_133509 RAD51B 0 . . . 0.09 62.22 21 5.19 No 65 0.78 Yes 0 0 No -37 0.46 No 29 85.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215612562 - NM_000465 BARD1 0 . . . 3.86 0 30 5.99 Yes 65 1.9 Yes 0 0 No -22 0.61 No 18 32.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89644109 + NM_000314 PTEN 0 . . . 2.69 64.23 17 4.6 No 72 1.14 Yes 0 0 No -35 0.59 No 46 81.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131897047 + NM_005732 RAD50 0 . . . 0.77 68.06 34 5.48 No 75 0.6 No 0 0 No -40 0.71 Yes 38 53.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69006477 + NM_133509 RAD51B 0 . . . 4.52 74.88 19 8.81 Yes 76 -3.44 No 0 0 No -28 0.88 Yes 51 65.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68666610 + NM_133509 RAD51B 0 . . . 8.33 85.67 16 5.06 No 46 0.76 No 0 0 No -23 0.8 Yes 47 75.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6041139 - NM_000535 PMS2 0 . . . 3.66 69.48 26 5.38 No 47 0.63 No 0 0 No -28 0.75 Yes 42 64.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59779032 - NM_032043 BRIP1 0 . . . 1.91 68.96 19 4.99 No 69 -4.49 No 0 0 No -18 0.17 No 51 77.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68746558 + NM_133509 RAD51B 0 . . . 4.31 66.97 20 5.57 Yes 51 0.35 No 0 0 No -19 0.67 Yes 51 76.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7588466 - NM_000546 TP53 0 . . . 6.98 85.09 36 6.69 Yes -1 0.43 No 0 0 No -27 0.31 No 47 76.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41239112 - NM_007294 BRCA1 0 . . . 6.4 88.91 28 6.36 Yes 30 0.89 Yes 0 0 No -27 0.79 Yes 49 64.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108151048 + NM_000051 ATM 0 . . . 0.19 0 36 8.37 Yes 4 1.07 Yes 0 0 No -35 0.52 No 54 48.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68873330 + NM_133509 RAD51B 0 . . . 5.58 69.08 16 4.69 No 46 -3.23 No 0 0 No -35 0.67 Yes 48 35.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108107721 + NM_000051 ATM 0 . . . 3.63 73.64 19 5 No 20 0.46 No 0 0 No -61 0.4 No 45 68.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68287099 + NM_133509 RAD51B 0 . . . 0.02 59.3 24 6.29 Yes 54 0.22 No 0 0 No -27 0.81 Yes 60 35.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105181468 + NM_021930 RINT1 0 . . . 7.04 83.82 25 4.18 No 12 1.32 Yes 0 0 No -20 0.36 No 46 92.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45794600 - NM_001048171 MUTYH 0 . . . 3.12 82.06 26 5.64 Yes 55 1.73 Yes 0 0 No -25 0.71 Yes 50 66.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68771591 + NM_133509 RAD51B 0 . . . 4.51 77.09 18 5.3 No 17 0.57 No 0 0 No -28 0.57 No 41 90.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68902618 + NM_133509 RAD51B 0 . . . 3.54 68.92 24 5 No 47 0.89 Yes 0 0 No -23 0.95 Yes 32 84.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37066579 + NM_000249 MLH1 0 . . . 2.95 0 28 5.29 No 16 0.56 No 0 0 No -27 0.27 No 49 72.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94190156 - NM_005591 MRE11 0 . . . 2.57 75.53 12 3.97 No 1 1.2 Yes 0 0 No -26 0.35 No 33 57.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69028737 + NM_133509 RAD51B 0 . . . 8.47 84.44 27 7.28 Yes 13 0.5 No 0 0 No -26 0.74 Yes 45 92.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105175441 + NM_021930 RINT1 0 . . . 6.12 80.97 16 5.63 Yes 9 1.56 Yes 0 0 No -22 0.6 No 49 71.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48035279 + NM_000179 MSH6 0 . . . 2.53 62.94 47 5.79 Yes 22 -3.61 No 0 0 No -28 0.73 Yes 49 88.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94203711 - NM_005591 MRE11 0 . . . 1.07 68.6 25 6 Yes 39 0.03 No 0 0 No -19 0.53 No 51 95.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7572321 - NM_000546 TP53 0 . . . 0.1 77.43 32 6.16 Yes 23 -3.08 No 0 0 No -31 0.47 No 52 52.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47780523 + NM_000251 MSH2 0 . . . 1.51 77.58 21 4.95 No 3 0.58 No 0 0 No -28 0.53 No 51 88.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69004377 + NM_133509 RAD51B 0 . . . 2.41 75.04 17 6.19 Yes 10 0.26 No 0 0 No -25 0.6 No 48 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47711143 + NM_000251 MSH2 0 . . . 0.06 73.53 24 5.23 No 63 1.12 Yes 0 0 No -21 0.66 No 61 26.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104168992 - NM_001100119 XRCC3 0 . . . 2.22 80.28 27 5.74 Yes -4 0.21 No 0 0 No -26 0.49 No 47 58.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108209476 + NM_000051 ATM 0 . . . 0.22 65.52 14 5.2 No 54 0.79 Yes 0 0 No -57 0.8 Yes 46 39.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131927854 + NM_005732 RAD50 0 . . . 0.5 78.22 19 5 No 67 0.69 No 0 0 No -18 0.82 Yes 45 52.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32907494 + NM_000059 BRCA2 0 . . . 1.42 67.92 36 6.48 Yes 69 -4.7 No 0 0 No -27 0.62 No 46 29.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108144702 + NM_000051 ATM 0 . . . 5.63 73.7 13 4.55 No 67 -1.1 No 0 0 No -23 0.53 No 46 90.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59765697 - NM_032043 BRIP1 0 . . . 0.53 69.9 20 8.93 Yes 34 -2.51 No 0 0 No -19 0.39 No 48 55.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41248864 - NM_007294 BRCA1 0 . . . 0.42 0 41 6.45 Yes 50 0.71 No 0 0 No -23 0.77 Yes 53 57.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68941775 + NM_133509 RAD51B 0 . . . 3.84 72.38 46 6.78 Yes 68 1.45 Yes 0 0 No -29 0.57 No 45 82.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94160158 - NM_005591 MRE11 0 . . . 5.52 77.74 47 7.8 Yes 12 0.58 No 0 0 No -33 0.63 No 46 87.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68816214 + NM_133509 RAD51B 0 . . . 1.33 69.4 30 5.48 No 45 1.11 Yes 0 0 No -19 0.28 No 38 54.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69022245 + NM_133509 RAD51B 0 . . . 1.16 72.16 20 4.83 No 47 -3.55 No 0 0 No -39 0.59 No 50 27.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41212639 - NM_007294 BRCA1 0 . . . 0.5 74.68 17 4.11 No 69 0.64 No 0 0 No -25 0.73 Yes 48 66.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56796183 + NM_058216 RAD51C 0 . . . 3.08 61.55 40 5.71 Yes 20 0.85 Yes 0 0 No -29 0.54 No 38 89.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94215933 - NM_005591 MRE11 0 . . . 4.08 77.08 40 4.81 No 11 0.97 Yes 0 0 No -26 0.89 Yes 47 89.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41233664 - NM_007294 BRCA1 0 . . . 1.04 0 17 5.38 No 26 -2.78 No 0 0 No -22 0.61 No 49 57.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69004649 + NM_133509 RAD51B 0 . . . 0.59 72.34 31 6.35 Yes 33 -4.34 No 0 0 No -30 0.59 No 45 56.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68438897 + NM_133509 RAD51B 0 . . . 4.78 77.44 30 5.52 No 41 1 Yes 0 0 No -29 0.88 Yes 17 54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37063355 + NM_000249 MLH1 0 . . . 8.27 82.82 83 7.04 Yes 59 0.45 No 0 0 No -38 0.89 Yes 47 76.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68456975 + NM_133509 RAD51B 0 . . . 2.64 69.23 31 6.39 Yes 20 1.04 Yes 0 0 No -30 0.74 Yes 43 84.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68698257 + NM_133509 RAD51B 0 . . . 3.36 74.47 44 5.52 No 75 1.59 Yes 0 0 No -36 0.53 No 35 65.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68348675 + NM_133509 RAD51B 0 . . . 5.69 79.29 32 5.6 Yes 4 1.51 Yes 0 0 No -31 0.53 No 47 72.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90974546 - NM_002485 NBN 0 . . . 2.71 81.63 26 3.87 No 12 0.7 No 0 0 No -25 0.85 Yes 46 82.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68785006 + NM_133509 RAD51B 0 . . . 1.2 70.32 22 3.33 No 65 0.36 No 0 0 No -21 0.59 No 53 70.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215596907 - NM_000465 BARD1 0 . . . 0.82 74.03 40 5.71 Yes 40 -1.18 No 0 0 No -33 0.86 Yes 29 41.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37040383 + NM_000249 MLH1 0 . . . 3.86 0 34 5.95 Yes 16 0.07 No 0 0 No -33 0.43 No 32 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68708347 + NM_133509 RAD51B 0 . . . 0.83 74.03 16 5.83 Yes 31 0.2 No 0 0 No -15 0.29 No 21 47.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1215854 + NM_000455 STK11 0 . . . 1.08 84.22 35 6.08 Yes 45 0.29 No 0 0 No -28 0.47 No 51 42.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29101546 - NM_001005735 CHEK2 0 . . . 2.87 63.93 26 5.2 No 37 0.53 No 0 0 No -23 0.73 Yes 25 65.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59897753 - NM_032043 BRIP1 0 . . . 0.83 71.68 29 5.16 No 59 0.82 Yes 0 0 No -24 0.59 No 40 67.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32932680 + NM_000059 BRCA2 0 . . . 0.32 74.68 27 5.28 No 67 0.19 No 0 0 No -26 0.63 No 54 81.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32939078 + NM_000059 BRCA2 0 . . . 8.47 74.97 22 5.8 Yes 63 1.31 Yes 0 0 No -21 0.67 Yes 39 43.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68548470 + NM_133509 RAD51B 0 . . . 7.44 72.91 33 6.78 Yes 13 0.13 No 0 0 No -36 0.62 No 45 89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68291976 + NM_133509 RAD51B 0 . . . 2.26 72.9 17 6.17 Yes 29 0.26 No 0 0 No -38 0.64 No 34 67.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68937544 + NM_133509 RAD51B 0 . . . 5.36 71.48 26 4.21 No 12 1.46 Yes 0 0 No -25 0.9 Yes 31 72.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68809590 + NM_004360 CDH1 0 . . . 3.12 65.53 32 5.58 Yes 22 0.11 No 0 0 No -31 0.76 Yes 40 60.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108239539 + NM_000051 ATM 0 . . . 2.51 75.28 29 5.43 No 75 0.18 No 0 0 No -28 0.91 Yes 49 86.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104172580 - NM_001100119 XRCC3 0 . . . 2.18 73.18 41 5.79 Yes 0 1.1 Yes 0 0 No -30 0.88 Yes 49 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68628173 + NM_133509 RAD51B 0 . . . 5.53 73.88 52 5.36 No 71 0.55 No 0 0 No -37 0.64 No 49 68.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648628 - NM_024675 PALB2 0 . . . 11.88 87.32 34 5.48 No 44 0.42 No 0 0 No -27 0.51 No 27 79.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59817527 - NM_032043 BRIP1 0 . . . 2.34 0 29 5.05 No 12 1.51 Yes 0 0 No -23 0.47 No 33 61.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190707112 + NM_000534 PMS1 0 . . . 0.26 0 34 6.63 Yes 31 1.16 Yes 0 0 No -33 0.57 No 15 68.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68851261 + NM_133509 RAD51B 0 . . . 1.02 64.89 29 6.62 Yes 38 0.2 No 0 0 No -28 0.65 No 20 43.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68515146 + NM_133509 RAD51B 0 . . . 4.96 91.21 17 5.32 No 12 1 Yes 0 0 No -24 0.52 No 46 90.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6018830 - NM_000535 PMS2 0 . . . 2.3 84.41 12 4.24 No 32 1.08 Yes 0 0 No -42 0.65 No 38 71.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68501059 + NM_133509 RAD51B 0 . . . 0.71 75.89 13 5.48 No 72 0.42 No 0 0 No -60 0.64 No 49 56.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190723838 + NM_000534 PMS1 0 . . . 2.61 70.6 21 4.17 No 30 1.44 Yes 0 0 No -21 0.34 No 47 71.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215596212 - NM_000465 BARD1 0 . . . 5.17 63.14 30 5.43 No 71 0.06 No 0 0 No -22 0.21 No 49 89.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68882420 + NM_133509 RAD51B 0 . . . 0.63 69.09 55 7.42 Yes 15 0.19 No 0 0 No -24 0.53 No 43 90.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68884359 + NM_133509 RAD51B 0 . . . 0.47 73.68 24 5.29 No 65 -5.21 No 0 0 No -21 0.88 Yes 49 44.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94167953 - NM_005591 MRE11 0 . . . 1.14 68.13 24 5.1 No 72 0.63 No 0 0 No -23 0.82 Yes 49 47.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32952556 + NM_000059 BRCA2 0 . . . 3.89 78.14 11 5 No 27 0.83 Yes 0 0 No -24 0.36 No 53 47.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47723282 + NM_000251 MSH2 0 . . . 12.56 88.27 47 7 Yes 24 1.24 Yes 0 0 No -44 0.57 No 34 38.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41026270 + NM_001164269 RAD51 0 . . . 0.5 74.09 22 6.16 Yes 64 1.11 Yes 0 0 No -21 0.95 Yes 36 56.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56808883 + NM_058216 RAD51C 0 . . . 3.68 70.85 25 6.55 Yes 13 0.82 Yes 0 0 No -35 0.42 No 45 79.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68493717 + NM_133509 RAD51B 0 . . . 6.29 70.45 29 5.56 Yes 19 1.22 Yes 0 0 No -28 0.86 Yes 39 87.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68741135 + NM_133509 RAD51B 0 . . . 0.64 67.76 33 5.22 No 47 0.01 No 0 0 No -32 0.71 Yes 40 47.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68829975 + NM_133509 RAD51B 0 . . . 4 72.07 28 5.7 Yes 51 0.28 No 0 0 No -28 0.59 No 14 61.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41256222 - NM_007294 BRCA1 0 . . . 1.54 61.21 48 7.45 Yes 68 0.69 No 0 0 No -47 0.86 Yes 49 29.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75493031 - NM_001040108 MLH3 0 . . . 7.01 95.65 28 6.11 Yes 46 1.09 Yes 0 0 No -27 0.44 No 41 41.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47634526 + NM_000251 MSH2 0 . . . 5.23 0 26 4.4 No 6 0.79 Yes 0 0 No -26 0.89 Yes 52 96.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1213398 + NM_000455 STK11 0 . . . 3.83 88.41 31 6.74 Yes 44 0.54 No 0 0 No -30 0.59 No 42 56.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89628465 + NM_000314 PTEN 0 . . . 1.49 0 19 4.8 No 5 0.03 No 0 0 No -18 0.74 Yes 53 66.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23629311 - NM_024675 PALB2 0 . . . 10 87.82 14 5.1 No 14 1.53 Yes 0 0 No -27 0.6 No 44 95.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37054791 + NM_000249 MLH1 0 . . . 5.49 81.81 29 5.57 Yes 57 0.69 No 0 0 No -28 0.55 No 53 89.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94194040 - NM_005591 MRE11 0 . . . 2.72 0 18 4.9 No 21 0.75 No 0 0 No -17 0.25 No 54 58.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37091676 + NM_000249 MLH1 0 . . . 0.5 0 32 5.57 Yes 43 -2.75 No 0 0 No -31 0.39 No 46 95.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69129507 + NM_133509 RAD51B 0 . . . 8.53 82.34 35 5.69 Yes 40 1.75 Yes 0 0 No -22 0.36 No 47 89.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59817314 - NM_032043 BRIP1 0 . . . 0.76 77.91 22 6.86 Yes 54 0.13 No 0 0 No -21 0.78 Yes 43 92.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131910830 + NM_005732 RAD50 0 . . . 0.38 65.53 22 5.2 No 14 0.14 No 0 0 No -20 0.54 No 41 76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32960865 + NM_000059 BRCA2 0 . . . 2.22 0 31 5.32 No 33 1.32 Yes 0 0 No -55 0.34 No 36 92.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104171750 - NM_001100119 XRCC3 0 . . . 6.42 74.76 36 6.3 Yes 71 0.76 No 0 0 No -35 0.76 Yes 51 78.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48024614 + NM_000179 MSH6 0 . . . 3.76 67.54 9 5 No 49 -4.77 No 0 0 No -27 0.41 No 53 37.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68839599 + NM_004360 CDH1 0 . . . 1.3 68.95 16 4.12 No 16 0.96 Yes 0 0 No -25 0.63 No 42 90.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21993297 - NM_000077 CDKN2A 0 . . . 1.55 67.01 21 4.67 No 61 -1.78 No 0 0 No -20 0.43 No 48 85.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94220279 - NM_005591 MRE11 0 . . . 6.52 87.64 15 5.27 No 42 0.7 No 0 0 No -55 0.52 No 46 76.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59819849 - NM_032043 BRIP1 0 . . . 3.76 72.92 14 6.02 Yes 68 -4.09 No 0 0 No -25 0.45 No 47 76.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215628794 - NM_000465 BARD1 0 . . . 8.55 78.99 63 7.87 Yes 22 0.9 Yes 0 0 No -50 0.62 No 36 73.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68841979 + NM_133509 RAD51B 0 . . . 9.19 81.35 14 4.78 No 11 2.16 Yes 0 0 No -22 0.65 No 47 91.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21969787 - NM_000077 CDKN2A 0 . . . 1.63 0 95 10.99 Yes 35 0.5 No 0 0 No -31 0.83 Yes 23 88.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68617214 + NM_133509 RAD51B 0 . . . 4.26 77.18 25 5.24 No 58 0.63 No 0 0 No -29 0.26 No 38 94.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108227863 + NM_000051 ATM 0 . . . 0.26 64.65 14 4.86 No -2 0.34 No 0 0 No -22 0.35 No 60 48.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6036176 - NM_000535 PMS2 0 . . . 4.93 81.17 22 5.66 Yes 21 -1.5 No 0 0 No -25 0.79 Yes 14 31.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68773839 + NM_133509 RAD51B 0 . . . 8.79 96.91 26 5.57 Yes 73 0.14 No 0 0 No -25 0.81 Yes 53 47.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6025100 - NM_000535 PMS2 0 . . . 7.21 76.97 19 4.4 No 42 0.51 No 0 0 No -19 0.59 No 43 79.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59782691 - NM_032043 BRIP1 0 . . . 1.56 51.81 33 6.07 Yes 51 -4.16 No 0 0 No -31 0.37 No 41 29.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68897286 + NM_133509 RAD51B 0 . . . 0.61 66.68 12 5.38 No 19 1.11 Yes 0 0 No -26 0.71 Yes 39 76.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68737060 + NM_133509 RAD51B 0 . . . 6.78 85.31 30 7.99 Yes 3 0.67 No 0 0 No -29 0.72 Yes 49 73.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68530823 + NM_133509 RAD51B 0 . . . 1.37 0 54 7.49 Yes 71 0.72 No 0 0 No -44 0.32 No 45 51.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108114471 + NM_000051 ATM 0 . . . 5.65 80.84 21 4.06 No 28 0.97 Yes 0 0 No -20 0.65 No 52 63.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59839094 - NM_032043 BRIP1 0 . . . 6.34 74.78 28 5.38 No 3 0.67 No 0 0 No -27 0.67 Yes 30 44.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68942671 + NM_133509 RAD51B 0 . . . 0.69 60.28 21 4.2 No 46 0.71 No 0 0 No -20 0.95 Yes 44 87.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32919713 + NM_000059 BRCA2 0 . . . 7.9 84 15 4.82 No 76 -4.17 No 0 0 No -26 0.73 Yes 45 43.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59912602 - NM_032043 BRIP1 0 . . . 2.81 78.75 11 3.6 No 50 1.22 Yes 0 0 No -32 0.44 No 47 67.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108100510 + NM_000051 ATM 0 . . . 2.38 74.27 28 5.03 No 7 1.03 Yes 0 0 No -27 0.77 Yes 45 70.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68528502 + NM_133509 RAD51B 0 . . . 4.5 76.91 41 5.04 No 9 0.94 Yes 0 0 No -23 0.27 No 45 78.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89625105 + NM_000314 PTEN 0 . . . 4.04 64.97 35 6.07 Yes 10 0.44 No 0 0 No -34 0.67 Yes 42 58.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108181941 + NM_000051 ATM 0 . . . 1.78 72.47 29 5.82 Yes 70 0.84 Yes 0 0 No -34 0.66 No 51 39.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56809025 + NM_058216 RAD51C 0 . . . 0.77 0 27 5.71 Yes 7 1.11 Yes 0 0 No -30 0.73 Yes 44 69.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37071188 + NM_000249 MLH1 0 . . . 0.99 63.31 30 6.35 Yes 76 -7.28 No 0 0 No -29 0.76 Yes 46 51.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68920352 + NM_133509 RAD51B 0 . . . 4.15 86.71 30 5.37 No 59 0.46 No 0 0 No -22 0.68 Yes 43 58.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215629045 - NM_000465 BARD1 0 . . . 1.71 78.26 34 4.24 No 41 1.34 Yes 0 0 No -27 0.73 Yes 47 96.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68733765 + NM_133509 RAD51B 0 . . . 3.46 0 48 6.86 Yes 40 -4.06 No 0 0 No -24 0.43 No 52 42.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68908786 + NM_133509 RAD51B 0 . . . 0.64 54.13 21 4.6 No 46 -4.79 No 0 0 No -21 0.41 No 43 86.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68581881 + NM_133509 RAD51B 0 . . . 1.05 61.38 22 5 No 49 -4.57 No 0 0 No -24 0.66 No 47 49.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190735074 + NM_000534 PMS1 0 . . . 0.65 63.59 19 5.45 No -4 0.41 No 0 0 No -23 0.75 Yes 56 44.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108176849 + NM_000051 ATM 0 . . . 4.68 71.33 27 5.39 No 58 1.02 Yes 0 0 No -26 0.77 Yes 48 56.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131894377 + NM_005732 RAD50 0 . . . 0.39 73.47 12 5.2 No 43 -3.17 No 0 0 No -45 0.41 No 50 71.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69092284 + NM_133509 RAD51B 0 . . . 4.44 81.31 20 4.86 No 52 1.47 Yes 0 0 No -23 0.33 No 49 94.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68353841 + NM_133509 RAD51B 0 . . . 0.67 70.6 9 4.77 No 36 1.25 Yes 20 0.48 Yes -46 0.5 No 22 46.42 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr14 68598021 + NM_133509 RAD51B 0 . . . 0.75 59.33 15 4.58 No 20 0.03 No 0 0 No -22 0.34 No 53 19.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89650407 + NM_000314 PTEN 0 . . . 4.11 72.48 18 4.9 No 9 1.47 Yes 0 0 No -45 0.27 No 42 78.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89679759 + NM_000314 PTEN 0 . . . 0.85 68.24 61 8.23 Yes 48 0.31 No 0 0 No -58 0.15 No 29 84.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104166636 - NM_001100119 XRCC3 0 . . . 2.59 71.81 21 4.47 No 12 0.42 No 0 0 No -20 0.72 Yes 46 89.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59895521 - NM_032043 BRIP1 0 . . . 2.2 79.24 34 6.31 Yes 73 0.27 No 0 0 No -33 0.55 No 12 39.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68656564 + NM_133509 RAD51B 0 . . . 4.75 85.02 46 5.05 No 4 1.24 Yes 0 0 No -20 0.82 Yes 54 52.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68345288 + NM_133509 RAD51B 0 . . . 7.99 94.29 28 5.37 No 55 0.28 No 0 0 No -45 0.32 No 46 87.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47678389 + NM_000251 MSH2 0 . . . 3.35 71.52 54 7.43 Yes 55 -5.51 No 0 0 No -35 0.73 Yes 22 43.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90963120 - NM_002485 NBN 0 . . . 1.7 78.8 12 4.61 No 38 1.23 Yes 0 0 No -47 0.46 No 44 44.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68780459 + NM_004360 CDH1 0 . . . 0.68 76.07 45 9.77 Yes 71 0.77 Yes 0 0 No -44 0.52 No 41 61.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215632270 - NM_000465 BARD1 0 . . . 4.07 75.8 39 5.35 No 5 1.47 Yes 0 0 No -31 0.69 Yes 53 63.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190698675 + NM_000534 PMS1 0 . . . 1.48 59.67 35 4.71 No 24 -2.98 No 0 0 No -32 0.48 No 45 63.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104181991 - NM_001100119 XRCC3 0 . . . 3.17 66.97 14 6.11 Yes 37 1.03 Yes 0 0 No -28 0.41 No 21 46.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900507 + NM_133509 RAD51B 0 . . . 2.54 69.16 15 6 Yes 51 0.96 Yes 0 0 No -52 0.62 No 47 53.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108106447 + NM_000051 ATM 0 . . . 0.7 72.42 17 3.85 No 51 -4.92 No 0 0 No -43 0.54 No 40 67.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37058347 + NM_000249 MLH1 0 . . . 2.4 69.24 17 5.92 Yes 51 0.32 No 0 0 No -16 0.55 No 40 89.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84382032 - NM_139076 FAM175A 0 . . . 4.59 84.39 28 5.47 No 60 -1.72 No 0 0 No -23 0.73 Yes 21 90.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29098492 - NM_001005735 CHEK2 0 . . . 0.61 76.74 24 5.2 No 49 -3.63 No 0 0 No -23 0.69 Yes 54 74.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52443362 - NM_004656 BAP1 0 . . . 4.73 81.35 12 4.24 No 35 1.51 Yes 0 0 No -24 0.39 No 51 56.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68916411 + NM_133509 RAD51B 0 . . . 2.47 63.11 36 6.85 Yes 73 0.18 No 0 0 No -35 0.49 No 46 73.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41201601 - NM_007294 BRCA1 0 . . . 2.13 69.49 31 7.05 Yes 70 0.74 No 0 0 No -30 0.76 Yes 52 68.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41007524 + NM_001164269 RAD51 0 . . . 2.1 76.63 21 5.42 No 57 -3.81 No 0 0 No -26 0.86 Yes 48 81.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108206753 + NM_000051 ATM 0 . . . 0.28 64.81 22 5.94 Yes 50 1.04 Yes 0 0 No -21 0.65 No 42 26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47751147 + NM_000251 MSH2 0 . . . 6.13 75.96 31 6.57 Yes 3 1.47 Yes 0 0 No -30 0.79 Yes 41 75.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7564242 - NM_000546 TP53 0 . . . 3.06 89.96 29 5.57 Yes 63 -3.86 No 0 0 No -28 0.74 Yes 43 39.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69051400 + NM_133509 RAD51B 0 . . . 2.76 70.2 40 6.57 Yes 71 1.2 Yes 0 0 No -39 0.7 Yes 45 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68329833 + NM_133509 RAD51B 0 . . . 0.73 69.58 14 5.57 Yes 34 0.64 No 0 0 No -24 0.63 No 40 52.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52435440 - NM_004656 BAP1 0 . . . 1.32 0 21 5.02 No 53 0.13 No 0 0 No -45 0.41 No 44 94.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47791247 + NM_000251 MSH2 0 . . . 2.74 82.87 23 4.98 No -3 1.31 Yes 0 0 No -26 0.47 No 61 29.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68560184 + NM_133509 RAD51B 0 . . . 7.66 82.38 21 4.56 No 51 0.52 No 0 0 No -20 0.67 Yes 47 59.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69082144 + NM_133509 RAD51B 0 . . . 2.01 67.07 29 5.86 Yes -4 0.89 Yes 0 0 No -28 0.73 Yes 43 69.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152365757 - NM_005431 XRCC2 0 . . . 0.73 75.85 40 6.55 Yes 36 0.13 No 0 0 No -39 0.76 Yes 14 47.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68803456 + NM_133509 RAD51B 0 . . . 8.5 88.28 16 4.35 No 71 0.2 No 0 0 No -15 0.69 Yes 48 60.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21975322 - NM_000077 CDKN2A 0 . . . 4.1 75.95 22 4.6 No 44 -1.48 No 0 0 No -21 0.92 Yes 41 58.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68877248 + NM_133509 RAD51B 0 . . . 5.08 72.7 21 4.58 No 36 0.57 No 0 0 No -20 0.93 Yes 44 65.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21988343 - NM_000077 CDKN2A 0 . . . 1.32 63.14 16 6.86 Yes 67 -4.89 No 0 0 No -26 0.42 No 46 58.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68729150 + NM_133509 RAD51B 0 . . . 1.32 82.88 46 9.95 Yes 27 1.74 Yes 0 0 No -20 0.55 No 48 27.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1227704 + NM_000455 STK11 0 . . . 3.89 74.38 15 5.28 No 59 1.1 Yes 0 0 No -21 0.63 No 44 51.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190727154 + NM_000534 PMS1 0 . . . 4.4 69.42 40 6.32 Yes 68 1.25 Yes 0 0 No -26 0.64 No 44 49.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37083877 + NM_000249 MLH1 0 . . . 1.99 66.45 29 5.34 No 5 1.32 Yes 0 0 No -28 0.8 Yes 34 55.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59755304 - NM_032043 BRIP1 0 . . . 2.9 0 22 4.27 No 17 0.49 No 0 0 No -21 0.52 No 37 50.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41267900 - NM_007294 BRCA1 0 . . . 0.8 77.85 16 6 Yes 28 -3.54 No 0 0 No -22 0.4 No 51 33.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89728275 + NM_000314 PTEN 0 . . . 7.7 83.55 18 4.72 No 5 0.24 No 0 0 No -30 0.53 No 45 71.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190740731 + NM_000534 PMS1 0 . . . 0.64 76.36 23 3.67 No 38 -3.11 No 0 0 No -22 0.76 Yes 49 43.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104164294 - NM_001100119 XRCC3 0 . . . 0.97 73.28 19 5 No 39 -1.15 No 0 0 No -28 0.71 Yes 41 62.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41224551 - NM_007294 BRCA1 0 . . . 1.02 74.55 30 5.57 Yes 48 0.32 No 0 0 No -24 0.54 No 44 61.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47705263 + NM_000251 MSH2 0 . . . 1.06 0 22 7.28 Yes 26 0.72 No 0 0 No -21 0.88 Yes 32 74.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23646211 - NM_024675 PALB2 0 . . . 2.3 61.32 26 5.54 No 62 0.64 No 0 0 No -25 0.64 No 57 54.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68994906 + NM_133509 RAD51B 0 . . . 5.22 71.23 27 5.5 No 54 0.26 No 0 0 No -26 0.45 No 45 46.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59799015 - NM_032043 BRIP1 0 . . . 8.32 80.46 31 5.7 Yes 66 1.01 Yes 0 0 No -27 0.55 No 41 63.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32907065 + NM_000059 BRCA2 0 . . . 3.35 84.56 14 4.93 No 9 0.26 No 0 0 No -27 0.79 Yes 49 95.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48028257 + NM_000179 MSH6 0 . . . 0.51 57.29 22 4.8 No 69 -2.78 No 0 0 No -21 0.68 Yes 49 48.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68773896 + NM_004360 CDH1 0 . . . 6.79 76.92 28 5.2 No 57 0.82 Yes 0 0 No -20 0.45 No 49 52.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152359181 - NM_005431 XRCC2 0 . . . 0.42 74.68 20 4.62 No 53 0.65 No 0 0 No -19 0.88 Yes 37 64.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68795978 + NM_133509 RAD51B 0 . . . 2.7 74.34 15 4.91 No 75 1.1 Yes 0 0 No -14 0.39 No 50 80.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1213273 + NM_000455 STK11 0 . . . 1.4 80.49 31 6.62 Yes 35 1.69 Yes 0 0 No -28 0.51 No 23 59.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41235487 - NM_007294 BRCA1 0 . . . 7.25 83.18 33 6.24 Yes 17 0.52 No 0 0 No -32 0.8 Yes 41 90.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68784963 + NM_133509 RAD51B 0 . . . 5.34 68.69 35 4.25 No 22 0.39 No 0 0 No -29 0.78 Yes 26 63.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108213486 + NM_000051 ATM 0 . . . 6.62 79.81 38 6.38 Yes 33 0.44 No 0 0 No -37 0.71 Yes 45 86.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47770077 + NM_000251 MSH2 0 . . . 7.52 84.62 55 7.05 Yes 18 0.7 No 0 0 No -28 0.54 No 40 75.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68356190 + NM_133509 RAD51B 0 . . . 1.65 61.72 32 7.52 Yes 18 0.68 No 0 0 No -31 0.69 Yes 40 72.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23631093 - NM_024675 PALB2 0 . . . 0.58 74.33 20 5.57 Yes 0 0.51 No 0 0 No -19 0.68 Yes 44 87.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69028409 + NM_133509 RAD51B 0 . . . 3.31 70.97 18 4.51 No 58 -2.47 No 0 0 No -20 0.57 No 42 65.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47722104 + NM_000251 MSH2 0 . . . 0.1 0 16 4.58 No 50 0.38 No 0 0 No -22 0.89 Yes 51 26.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68406200 + NM_133509 RAD51B 0 . . . 0.24 74.29 17 5.29 No 44 0.58 No 0 0 No -16 0.4 No 45 69.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94176063 - NM_005591 MRE11 0 . . . 8.03 83.27 17 5.66 Yes 69 0.27 No 0 0 No -22 0.54 No 45 77.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69072066 + NM_133509 RAD51B 0 . . . 8.33 92.19 27 6.08 Yes 14 0.67 No 0 0 No -26 0.95 Yes 44 84.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90970008 - NM_002485 NBN 0 . . . 2.37 84.72 19 4.66 No 52 -1.9 No 0 0 No -18 0.48 No 52 64.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190671745 + NM_000534 PMS1 0 . . . 9.94 92.67 41 6.63 Yes 57 0.46 No 0 0 No -40 0.47 No 36 64.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89655151 + NM_000314 PTEN 0 . . . 4.9 63.62 19 4.58 No 73 -2.69 No 0 0 No -18 0.84 Yes 45 61.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90973892 - NM_002485 NBN 0 . . . 6.53 79.73 15 3.84 No 45 0.12 No 0 0 No -29 0.82 Yes 34 82.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68604730 + NM_133509 RAD51B 0 . . . 9.5 80.65 26 5.18 No 20 -1.75 No 0 0 No -25 0.8 Yes 50 74.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6039904 - NM_000535 PMS2 0 . . . 4.38 86.33 17 4.8 No 4 0.74 No 0 0 No -19 0.75 Yes 50 90.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152369531 - NM_005431 XRCC2 0 . . . 1.04 63.95 33 6.92 Yes 45 1.22 Yes 0 0 No -30 0.63 No 36 82.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68599226 + NM_133509 RAD51B 0 . . . 2.61 79.52 19 4.8 No 57 -4.46 No 0 0 No -45 0.35 No 47 58.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68313894 + NM_133509 RAD51B 0 . . . 8.93 74.43 17 4.8 No 6 1.05 Yes 0 0 No -25 0.64 No 42 67.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59897668 - NM_032043 BRIP1 0 . . . 2.72 79.66 21 4.67 No 64 -4.5 No 0 0 No -18 0.47 No 49 45.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59899867 - NM_032043 BRIP1 0 . . . 4.36 66.36 31 5.93 Yes 37 0.39 No 0 0 No -35 0.82 Yes 30 65.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89686388 + NM_000314 PTEN 0 . . . 0.38 78.51 18 6.16 Yes 4 1.27 Yes 0 0 No -26 0.73 Yes 50 43.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84381009 - NM_139076 FAM175A 0 . . . 3.22 73.1 15 5.2 No 68 0.85 Yes 0 0 No -45 0.45 No 44 35.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215674766 - NM_000465 BARD1 0 . . . 4.76 74.24 25 5.1 No 45 0.32 No 0 0 No -24 0.94 Yes 13 48.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131981072 + NM_005732 RAD50 0 . . . 0.03 70.93 15 4.36 No 47 0.71 No 0 0 No -47 0.89 Yes 32 71.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59938014 - NM_032043 BRIP1 0 . . . 2.53 0 17 5.24 No 20 1.13 Yes 0 0 No -25 0.7 Yes 38 71.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68497258 + NM_133509 RAD51B 0 . . . 2.86 0 21 5 No 8 1.76 Yes 0 0 No -24 0.59 No 41 57.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108230732 + NM_000051 ATM 0 . . . 0.45 76.23 24 5.71 Yes 74 -6.42 No 0 0 No -21 0.56 No 51 24.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68982990 + NM_133509 RAD51B 0 . . . 1.09 61 23 4.59 No 40 0.52 No 0 0 No -32 0.72 Yes 39 48.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68798283 + NM_133509 RAD51B 0 . . . 1 73.51 34 7.55 Yes 11 -1.42 No 0 0 No -33 0.69 Yes 47 57.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1210284 + NM_000455 STK11 0 . . . 0.23 0 25 5.38 No 59 -0.91 No 0 0 No -24 0.37 No 60 23.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89630799 + NM_000314 PTEN 0 . . . 1.61 73.74 44 5.7 Yes 5 0.34 No 0 0 No -25 0.61 No 49 78.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47725020 + NM_000251 MSH2 0 . . . 4.18 90.38 26 6.41 Yes 28 0.7 No 0 0 No -25 0.73 Yes 30 36.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59811587 - NM_032043 BRIP1 0 . . . 1.47 63.13 35 5.36 No 63 0.39 No 0 0 No -24 0.68 Yes 39 74.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68798381 + NM_133509 RAD51B 0 . . . 3.39 77.48 50 4.59 No 58 -4.69 No 0 0 No -30 0.47 No 43 87.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108116277 + NM_000051 ATM 0 . . . 6.17 78.21 18 4.47 No 18 0.05 No 0 0 No -28 0.85 Yes 46 92.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68498825 + NM_133509 RAD51B 0 . . . 0.86 0 21 4.58 No 48 0.66 No 0 0 No -20 0.8 Yes 32 68.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215669116 - NM_000465 BARD1 0 . . . 1.98 74.77 29 4.83 No 40 1.13 Yes 0 0 No -28 0.95 Yes 45 44.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7589984 - NM_000546 TP53 0 . . . 4.5 78.14 27 4.44 No 10 0.21 No 0 0 No -26 0.82 Yes 48 80.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190691103 + NM_000534 PMS1 0 . . . 3.86 85.05 13 5 No 75 0.51 No 0 0 No -26 0.86 Yes 27 69.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32893985 + NM_000059 BRCA2 0 . . . 1.41 72.86 36 4.86 No 22 0.8 Yes 0 0 No -35 0.52 No 33 78.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68357652 + NM_133509 RAD51B 0 . . . 9.76 91.97 26 5.65 Yes 70 1.2 Yes 0 0 No -25 0.4 No 37 86.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47753623 + NM_000251 MSH2 0 . . . 5.16 78.33 15 4 No 18 0.58 No 0 0 No -30 0.35 No 53 84.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68854182 + NM_004360 CDH1 0 . . . 7.86 80.38 42 6.68 Yes 9 1.72 Yes 0 0 No -28 0.68 Yes 35 64.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69047344 + NM_133509 RAD51B 0 . . . 1.43 0 15 4.58 No 7 1.33 Yes 0 0 No -41 0.66 No 37 73.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6024414 - NM_000535 PMS2 0 . . . 2.16 83.95 19 3.72 No 73 -2.11 No 0 0 No -19 0.26 No 47 85.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59763082 - NM_032043 BRIP1 0 . . . 1.21 72.05 21 5.4 No 41 0.38 No 0 0 No -20 0.57 No 39 78.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29104999 - NM_001005735 CHEK2 0 . . . 6.03 86.19 29 5.39 No 18 0.16 No 0 0 No -31 0.43 No 45 94.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33436537 - NM_002878 RAD51D 0 . . . 1.23 64.99 18 4.2 No 74 -6.46 No 0 0 No -20 0.57 No 50 52.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40993643 + NM_001164269 RAD51 0 . . . 0.2 75.62 30 5.02 No 20 -1.61 No 0 0 No -30 0.56 No 54 46.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47726797 + NM_000251 MSH2 0 . . . 3.64 0 31 5.56 Yes 11 0.24 No 0 0 No -26 0.48 No 47 38.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68581019 + NM_133509 RAD51B 0 . . . 4.21 69.94 16 4.47 No 74 0.79 Yes 0 0 No -30 0.28 No 37 69.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6042918 - NM_000535 PMS2 0 . . . 3.25 0 9 3.87 No 36 -2.33 No 0 0 No -29 0.63 No 34 30.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59902336 - NM_032043 BRIP1 0 . . . 9.46 84.74 27 5.2 No 65 -1.98 No 0 0 No -26 0.52 No 33 77.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215673302 - NM_000465 BARD1 0 . . . 4.52 79.24 23 4.15 No 40 0.85 Yes 0 0 No -23 0.47 No 46 60.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89640189 + NM_000314 PTEN 0 . . . 3.93 76.25 33 5.76 Yes 4 1.04 Yes 0 0 No -32 0.51 No 41 62.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7563958 - NM_000546 TP53 0 . . . 4.44 75.94 22 5.38 No 10 1.25 Yes 0 0 No -21 0.66 No 48 87.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68888987 + NM_133509 RAD51B 0 . . . 1.76 66.61 34 6.5 Yes 57 0.61 No 0 0 No -27 0.23 No 52 59.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89697820 + NM_000314 PTEN 0 . . . 4.46 65.64 54 7.62 Yes 9 0.63 No 0 0 No -32 0.16 No 49 67.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190660173 + NM_000534 PMS1 0 . . . 0.67 77.69 37 6.95 Yes 52 1.88 Yes 0 0 No -22 0.65 No 51 36.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29112859 - NM_001005735 CHEK2 0 . . . 0.75 58.58 21 5.2 No -3 0.09 No 0 0 No -20 0.53 No 39 54.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131977017 + NM_005732 RAD50 0 . . . 1.52 66.3 22 4.99 No 69 0.41 No 0 0 No -21 0.72 Yes 40 75.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190672167 + NM_000534 PMS1 0 . . . 1.86 78.44 28 6.99 Yes 72 0.51 No 0 0 No -27 0.78 Yes 27 48.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69016263 + NM_133509 RAD51B 0 . . . 3.19 0 20 5.99 Yes 20 1.2 Yes 0 0 No -19 0.57 No 38 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215664018 - NM_000465 BARD1 0 . . . 0.33 0 28 8.68 Yes 33 0.45 No 0 0 No -28 0.87 Yes 39 47.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68851314 + NM_004360 CDH1 0 . . . 2.05 76.74 45 7.13 Yes 1 0.81 Yes 0 0 No -35 0.48 No 53 58.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59836586 - NM_032043 BRIP1 0 . . . 1.09 0 17 5.47 No 34 1.47 Yes 0 0 No -28 0.42 No 24 76.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68720456 + NM_133509 RAD51B 0 . . . 4.8 68.73 29 5.47 No 5 1.8 Yes 0 0 No -28 0.53 No 47 64.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215656175 - NM_000465 BARD1 0 . . . 4.88 76.33 32 5.15 No 21 0.78 Yes 0 0 No -31 0.31 No 37 68.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68820099 + NM_004360 CDH1 0 . . . 0.38 0 27 6.48 Yes 63 1.4 Yes 0 0 No -26 0.8 Yes 36 58.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104179923 - NM_001100119 XRCC3 0 . . . 0.45 0 22 5.16 No 65 -4.59 No 0 0 No -51 0.38 No 31 36.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68349942 + NM_133509 RAD51B 0 . . . 6.16 76.91 26 4.35 No 34 1.52 Yes 0 0 No -25 0.8 Yes 20 55.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94209288 - NM_005591 MRE11 0 . . . 5.21 67.52 27 3.96 No 12 0.53 No 0 0 No -21 0.5 No 51 73.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59755310 - NM_032043 BRIP1 0 . . . 3.96 75.24 32 5.33 No 11 0.51 No 0 0 No -34 0.83 Yes 43 58.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94171579 - NM_005591 MRE11 0 . . . 10.37 82.39 31 6.07 Yes 40 0.24 No 0 0 No -30 0.74 Yes 40 58.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68789772 + NM_133509 RAD51B 0 . . . 8.15 88.72 17 5.28 No 76 -3.85 No 0 0 No -27 0.52 No 42 38.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68311124 + NM_133509 RAD51B 0 . . . 1.67 69.16 19 4.79 No -2 0.1 No 0 0 No -49 0.5 No 47 79.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89727106 + NM_000314 PTEN 0 . . . 2.23 63.47 19 5.18 No 0 0.55 No 0 0 No -23 0.52 No 53 86.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68931055 + NM_133509 RAD51B 0 . . . 5.38 74.83 54 7 Yes 9 1.14 Yes 0 0 No -22 0.65 No 42 39.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68882091 + NM_133509 RAD51B 0 . . . 0.13 66.43 29 4.67 No 64 -3.1 No 0 0 No -28 0.79 Yes 52 24.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131944170 + NM_005732 RAD50 0 . . . 6.73 83.53 49 4.3 No 65 1.11 Yes 0 0 No -26 0.87 Yes 46 60.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37089828 + NM_000249 MLH1 0 . . . 7.27 83.35 21 5.74 Yes 50 0.85 Yes 0 0 No -20 0.87 Yes 37 43.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1230407 + NM_000455 STK11 0 . . . 0.26 0 20 6.44 Yes 75 0.95 Yes 0 0 No -32 0.56 No 36 24.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68915670 + NM_133509 RAD51B 0 . . . 6.28 78.31 20 5.1 No 7 0.23 No 0 0 No -19 0.76 Yes 51 88.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68600058 + NM_133509 RAD51B 0 . . . 4.74 83.34 15 4.58 No 7 0.44 No 0 0 No -29 0.42 No 47 88.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94166899 - NM_005591 MRE11 0 . . . 3.71 69.59 25 4.83 No 53 -4.01 No 0 0 No -21 0.4 No 48 84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68315380 + NM_133509 RAD51B 0 . . . 1.33 68.19 33 7.8 Yes 38 0.81 Yes 0 0 No -32 0.69 Yes 50 81.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68315460 + NM_133509 RAD51B 0 . . . 7.58 73.35 28 5.82 Yes 4 1.06 Yes 0 0 No -27 0.41 No 41 70.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59874092 - NM_032043 BRIP1 0 . . . 3.86 66.35 14 3.2 No 33 1.76 Yes 0 0 No -29 0.69 Yes 25 92.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215617570 - NM_000465 BARD1 0 . . . 3.61 79.08 21 5.51 No 75 0.95 Yes 0 0 No -29 0.43 No 47 70.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21968122 - NM_000077 CDKN2A 0 . . . 4.85 70.98 28 5.72 Yes 75 -2.77 No 0 0 No -27 0.87 Yes 35 40.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105178951 + NM_021930 RINT1 0 . . . 0.43 74.07 53 7.26 Yes 18 -1.4 No 0 0 No -35 0.44 No 17 64.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56778240 + NM_058216 RAD51C 0 . . . 1.9 70.59 19 4.77 No 62 1.16 Yes 0 0 No -33 0.8 Yes 38 60.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59854682 - NM_032043 BRIP1 0 . . . 3.97 78.91 20 4.67 No 50 0.78 Yes 0 0 No -57 0.52 No 54 25.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89648836 + NM_000314 PTEN 0 . . . 9.06 84.3 29 6.99 Yes 21 2.39 Yes 0 0 No -28 0.76 Yes 37 92.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68835133 + NM_004360 CDH1 0 . . . 0.05 84.22 13 4.43 No 33 0.93 Yes 0 0 No -12 0.51 No 25 41.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29115536 - NM_001005735 CHEK2 0 . . . 4.39 64.13 16 4.45 No 59 1.1 Yes 0 0 No -42 0.4 No 43 86.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47647135 + NM_000251 MSH2 0 . . . 2.13 85.37 13 4.89 No 33 1.13 Yes 0 0 No -23 0.45 No 51 74.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68361811 + NM_133509 RAD51B 0 . . . 6.42 79.74 27 4.98 No 74 0.68 No 0 0 No -21 0.62 No 47 56.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68355026 + NM_133509 RAD51B 0 . . . 4.66 84.26 17 4.61 No 59 1.2 Yes 0 0 No -21 0.66 No 46 38.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921276 + NM_133509 RAD51B 0 . . . 1.69 64.78 35 5.69 Yes 61 1.72 Yes 0 0 No -34 0.73 Yes 41 82.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68861911 + NM_004360 CDH1 0 . . . 4.66 79.99 37 8.15 Yes 32 0.23 No 0 0 No -26 0.31 No 26 73.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29084212 - NM_001005735 CHEK2 0 . . . 5.45 85.47 16 4.68 No 5 0.16 No 0 0 No -37 0.53 No 53 49.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37073731 + NM_000249 MLH1 0 . . . 0.53 85.81 33 5.97 Yes 41 0.36 No 0 0 No -32 0.87 Yes 53 45.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68819989 + NM_004360 CDH1 0 . . . 5.82 81.34 39 6.23 Yes 7 1.12 Yes 0 0 No -21 0.84 Yes 51 84.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190730849 + NM_000534 PMS1 0 . . . 2.54 71.97 29 6.32 Yes 53 -4.39 No 0 0 No -28 0.78 Yes 53 69.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68798208 + NM_133509 RAD51B 0 . . . 7.24 79.91 36 5.85 Yes 47 -3.02 No 0 0 No -30 0.5 No 43 63.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152351328 - NM_005431 XRCC2 0 . . . 2.03 75.57 19 5.39 No 64 0.84 Yes 0 0 No -24 0.57 No 48 22.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89684349 + NM_000314 PTEN 0 . . . 9.33 85.4 26 5.29 No 42 1.17 Yes 0 0 No -25 0.3 No 45 69.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21979223 - NM_000077 CDKN2A 0 . . . 2.68 0 31 5.01 No 74 0.54 No 0 0 No -30 0.79 Yes 54 63.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94183228 - NM_005591 MRE11 0 . . . 2.77 78.8 24 5.43 No 36 0.96 Yes 0 0 No -26 0.59 No 48 56.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68401408 + NM_133509 RAD51B 0 . . . 7.47 84.99 25 6.11 Yes 45 1.48 Yes 0 0 No -24 0.77 Yes 34 67.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108132789 + NM_000051 ATM 0 . . . 1.22 75.38 25 3.68 No 45 -2.64 No 0 0 No -27 0.82 Yes 50 44.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68370571 + NM_133509 RAD51B 0 . . . 4.64 88.12 22 7.51 Yes 7 0.1 No 0 0 No -21 0.64 No 51 84.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45807217 - NM_001048171 MUTYH 0 . . . 3.06 73.38 17 4.79 No 17 0.86 Yes 0 0 No -22 0.24 No 41 84.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1226813 + NM_000455 STK11 0 . . . 2.36 67.44 17 5.48 No 74 -5.05 No 0 0 No -28 0.63 No 40 72.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41228009 - NM_007294 BRCA1 0 . . . 1.27 73.28 36 5.13 No 33 1.38 Yes 0 0 No -23 0.94 Yes 25 89.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47687917 + NM_000251 MSH2 0 . . . 9.78 87.08 10 3.87 No 23 0.7 No 0 0 No -41 0.53 No 46 83.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190719628 + NM_000534 PMS1 0 . . . 0.23 64.72 15 9.32 Yes 24 0.37 No 0 0 No -34 0.55 No 28 28.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47660536 + NM_000251 MSH2 0 . . . 1.85 67.19 32 5.17 No 55 -0.53 No 0 0 No -31 0.47 No 40 53.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68478550 + NM_133509 RAD51B 0 . . . 5.38 70.02 42 6.63 Yes 62 0.56 No 0 0 No -41 0.85 Yes 42 50.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94224205 - NM_005591 MRE11 0 . . . 3.07 74.84 17 4.36 No 11 1.28 Yes 0 0 No -41 0.49 No 46 55.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68454237 + NM_133509 RAD51B 0 . . . 5.84 79.89 52 5.86 Yes 20 1.17 Yes 0 0 No -23 0.48 No 47 72.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68693839 + NM_133509 RAD51B 0 . . . 0.27 69.24 30 5.57 Yes 75 -2.67 No 0 0 No -30 0.82 Yes 49 44.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108181739 + NM_000051 ATM 0 . . . 2.52 88.97 26 5 No 2 0.62 No 0 0 No -21 0.64 No 40 26.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68661552 + NM_133509 RAD51B 0 . . . 5.19 82.39 21 5.58 Yes 12 0.37 No 0 0 No -16 0.67 Yes 45 48.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89638262 + NM_000314 PTEN 0 . . . 0.36 61.76 18 5.29 No 29 0.68 No 0 0 No -42 0.3 No 41 75.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40986432 + NM_001164269 RAD51 0 . . . 2.98 83.37 36 5.85 Yes 66 1.39 Yes 0 0 No -35 0.59 No 48 90.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68984724 + NM_133509 RAD51B 0 . . . 2.43 74.38 27 5.2 No 55 1.55 Yes 0 0 No -26 0.56 No 51 87.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108166428 + NM_000051 ATM 0 . . . 5.5 90.92 26 5.96 Yes 46 0.83 Yes 0 0 No -26 0.78 Yes 11 58.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68512742 + NM_133509 RAD51B 0 . . . 6.09 75.32 23 4.49 No 69 1.01 Yes 0 0 No -22 0.82 Yes 50 39.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68775678 + NM_004360 CDH1 0 . . . 6.66 83.03 20 4.67 No 10 1.22 Yes 0 0 No -19 0.59 No 48 94.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41264369 - NM_007294 BRCA1 0 . . . 0.09 74.68 27 5.1 No 4 0.41 No 0 0 No -26 0.85 Yes 54 88.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68945648 + NM_133509 RAD51B 0 . . . 0.76 67.67 31 5.48 No 22 0.68 No 0 0 No -27 0.33 No 36 87.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89644554 + NM_000314 PTEN 0 . . . 5.28 79.1 26 4.96 No -1 0.89 Yes 0 0 No -26 0.49 No 52 47.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190659154 + NM_000534 PMS1 0 . . . 3.71 61.58 21 4.26 No 73 1.57 Yes 0 0 No -20 0.84 Yes 52 59.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1225453 + NM_000455 STK11 0 . . . 1.64 74.7 12 4.28 No 7 1.03 Yes 0 0 No -22 0.56 No 51 79.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41217283 - NM_007294 BRCA1 0 . . . 4.3 77.83 34 3.62 No 29 0.22 No 0 0 No -29 0.42 No 48 65.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851960 - NM_032043 BRIP1 0 . . . 5.11 80.65 18 4.9 No 7 0.8 Yes 0 0 No -21 0.87 Yes 42 49.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47787214 + NM_000251 MSH2 0 . . . 3.26 81.1 17 4.9 No 6 0.54 No 0 0 No -25 0.32 No 52 73.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41220443 - NM_007294 BRCA1 0 . . . 4.28 73.9 19 7.04 Yes 57 0.41 No 0 0 No -18 0.57 No 50 41.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68910469 + NM_133509 RAD51B 0 . . . 4.89 86.2 27 4.49 No 16 0.13 No 0 0 No -26 0.84 Yes 53 24.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48006618 + NM_000179 MSH6 0 . . . 6.82 76.69 16 5.89 Yes 63 0.28 No 0 0 No -22 0.73 Yes 42 93.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68792055 + NM_133509 RAD51B 0 . . . 0.83 74.78 19 6.26 Yes 75 -3.58 No 0 0 No -38 0.41 No 52 46.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69107534 + NM_133509 RAD51B 0 . . . 4.11 81.92 9 4.58 No 14 0.2 No 0 0 No -33 0.67 Yes 44 43.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131930348 + NM_005732 RAD50 0 . . . 2.32 85.68 31 6.4 Yes 46 -2.61 No 0 0 No -23 0.61 No 48 33.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41222082 - NM_007294 BRCA1 0 . . . 0.7 74.47 19 4.44 No 64 1.11 Yes 0 0 No -18 0.47 No 36 38.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29085937 - NM_001005735 CHEK2 0 . . . 4.33 74.11 22 5.74 Yes 65 -2.7 No 0 0 No -21 0.6 No 39 66.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89705380 + NM_000314 PTEN 0 . . . 0.7 0 27 5.28 No 15 0.16 No 0 0 No -26 0.98 Yes 52 49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37071799 + NM_000249 MLH1 0 . . . 1.73 77.58 13 4.36 No 45 1.51 Yes 0 0 No -48 0.8 Yes 46 91.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108100674 + NM_000051 ATM 0 . . . 1.19 0 132 11.41 Yes -1 1.17 Yes 0 0 No -29 0.28 No 39 76.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69093411 + NM_133509 RAD51B 0 . . . 3.01 74.5 14 5.56 Yes 53 -2.88 No 0 0 No -24 0.63 No 49 49.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41225241 - NM_007294 BRCA1 0 . . . 0 56.99 13 4.36 No 23 0.47 No 0 0 No -37 0.75 Yes 28 74.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23627997 - NM_024675 PALB2 0 . . . 1.89 73.46 33 4.4 No 21 0.99 Yes 0 0 No -27 0.74 Yes 33 61.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90966291 - NM_002485 NBN 0 . . . 4.14 85.77 52 7.34 Yes 39 1.82 Yes 0 0 No -21 0.52 No 48 66.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108115681 + NM_000051 ATM 0 . . . 0.96 75.08 16 4.62 No 0 0.62 No 0 0 No -33 0.61 No 43 90.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59849586 - NM_032043 BRIP1 0 . . . 4.59 89.53 28 3.92 No 62 1.12 Yes 0 0 No -28 0.5 No 44 75.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68695317 + NM_133509 RAD51B 0 . . . 3.21 67.31 12 5.63 Yes 45 0.47 No 0 0 No -26 0.59 No 39 63.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104182857 - NM_001100119 XRCC3 0 . . . 0.33 69.28 21 5.1 No NA NA NA 0 0 No -20 0.71 Yes 50 39.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131971787 + NM_005732 RAD50 0 . . . 6.71 81 18 4.9 No 12 0.33 No 0 0 No -45 0.77 Yes 46 78.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68988821 + NM_133509 RAD51B 0 . . . 1.86 0 24 5.36 No 26 0.21 No 0 0 No -26 0.42 No 43 53.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131934045 + NM_005732 RAD50 0 . . . 3.6 69.29 21 6.24 Yes 62 1.07 Yes 0 0 No -20 0.79 Yes 49 53.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68476352 + NM_133509 RAD51B 0 . . . 2.14 65.71 23 6.08 Yes 38 1.36 Yes 0 0 No -22 0.83 Yes 20 51.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89668121 + NM_000314 PTEN 0 . . . 3.41 73.07 17 4.79 No 1 1.15 Yes 0 0 No -55 0.52 No 50 55.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68526080 + NM_133509 RAD51B 0 . . . 3.83 69.9 22 7.28 Yes 26 1.24 Yes 0 0 No -21 0.83 Yes 31 47.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190715899 + NM_000534 PMS1 0 . . . 0.98 0 13 3.76 No 69 1.2 Yes 0 0 No -25 0.8 Yes 50 81.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47749951 + NM_000251 MSH2 0 . . . 6.37 72.25 23 5.03 No 55 0.67 No 0 0 No -22 0.83 Yes 37 79.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68572222 + NM_133509 RAD51B 0 . . . 0.94 65.56 13 4.36 No 38 0.2 No 0 0 No -16 0.76 Yes 20 87.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37043581 + NM_000249 MLH1 0 . . . 1.66 0 41 6.43 Yes 45 1 Yes 0 0 No -28 0.5 No 13 41.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69011199 + NM_133509 RAD51B 0 . . . 0.31 70.53 24 5.47 No 30 0.48 No 0 0 No -20 0.6 No 28 56.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108153244 + NM_000051 ATM 0 . . . 4.66 72.07 23 5.29 No 66 0.74 No 0 0 No -22 0.33 No 33 50.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7585490 - NM_000546 TP53 0 . . . 1.95 0 27 5.57 Yes 11 0.96 Yes 0 0 No -22 0.57 No 47 85.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41010153 + NM_001164269 RAD51 0 . . . 4.02 84.69 59 7.12 Yes 35 0.3 No 0 0 No -54 0.8 Yes 44 43.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68303109 + NM_133509 RAD51B 0 . . . 1.07 68.69 53 7.55 Yes 6 0.82 Yes 0 0 No -38 0.65 No 45 48.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68452825 + NM_133509 RAD51B 0 . . . 1.35 60.69 26 5.13 No 58 0.47 No 0 0 No -25 0.83 Yes 40 58.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68751015 + NM_133509 RAD51B 0 . . . 1.59 74.38 36 5.21 No 42 0.83 Yes 0 0 No -35 0.69 Yes 16 62.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131917419 + NM_005732 RAD50 0 . . . 1.78 62.95 45 6.83 Yes 69 -5.96 No 0 0 No -25 0.77 Yes 49 59.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108148209 + NM_000051 ATM 0 . . . 5.49 83.27 14 4.47 No 32 0.62 No 0 0 No -29 0.52 No 49 59.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108179502 + NM_000051 ATM 0 . . . 2.58 75.2 23 5 No 32 -3.9 No 0 0 No -23 0.63 No 42 65.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694975 + NM_000534 PMS1 0 . . . 6.02 71.33 21 6.51 Yes -2 1.43 Yes 0 0 No -21 0.75 Yes 51 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68610396 + NM_133509 RAD51B 0 . . . 1.93 70.95 15 5.74 Yes -4 -0.82 No 0 0 No -24 0.38 No 31 59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402403 + NM_133509 RAD51B 0 . . . 3.19 74.41 15 5.7 Yes 25 0.55 No 0 0 No -45 0.37 No 51 56.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68860048 + NM_133509 RAD51B 0 . . . 4.69 64.07 23 4.69 No 34 0.95 Yes 0 0 No -22 0.89 Yes 24 86.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68677332 + NM_133509 RAD51B 0 . . . 0.9 69.69 12 4.24 No 66 1.46 Yes 0 0 No -31 0.51 No 54 59.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68865705 + NM_004360 CDH1 0 . . . 2.08 68.34 13 4.22 No 23 1.62 Yes 0 0 No -11 0.19 No 35 83.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59901585 - NM_032043 BRIP1 0 . . . 1.46 62.04 28 4.7 No 37 0.42 No 0 0 No -27 0.54 No 44 38.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68766168 + NM_133509 RAD51B 0 . . . 4.3 66.85 19 4.79 No 51 0.98 Yes 0 0 No -19 0.36 No 46 39.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68917843 + NM_133509 RAD51B 0 . . . 3.17 73.61 22 4.64 No 42 1.13 Yes 0 0 No -26 0.39 No 44 88.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68797760 + NM_133509 RAD51B 0 . . . 4.47 60.05 35 5.92 Yes 15 -3.13 No 0 0 No -34 0.27 No 48 51.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68958261 + NM_133509 RAD51B 0 . . . 1.07 64.52 22 4.71 No 75 -3.13 No 0 0 No -21 0.93 Yes 28 69.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68904411 + NM_133509 RAD51B 0 . . . 2.65 78.98 15 4.43 No 5 0.53 No 0 0 No -42 0.52 No 53 42.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41014227 + NM_001164269 RAD51 0 . . . 0.42 0 26 3.82 No 50 0.2 No 0 0 No -25 0.72 Yes 40 42.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68958530 + NM_133509 RAD51B 0 . . . 3.57 68.95 15 3.74 No 67 0.68 No 0 0 No -26 0.42 No 45 59.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68824162 + NM_004360 CDH1 0 . . . 1.46 63.93 27 6.48 Yes 16 0.25 No 0 0 No -26 0.89 Yes 42 82.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59847583 - NM_032043 BRIP1 0 . . . 4.39 78.16 35 6.71 Yes 8 0.01 No 0 0 No -24 0.58 No 50 82.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215593914 - NM_000465 BARD1 0 . . . 1.13 74.01 15 4.91 No 3 0.47 No 0 0 No -22 0.49 No 61 40.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56796795 + NM_058216 RAD51C 0 . . . 0.83 74.68 46 6.71 Yes 44 0.91 Yes 0 0 No -20 0.61 No 46 79.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190705741 + NM_000534 PMS1 0 . . . 1.64 80.95 17 4.44 No 7 0.12 No 0 0 No -21 0.31 No 47 86.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47802086 + NM_000251 MSH2 0 . . . 1.04 73.08 18 4.9 No 25 0.33 No 0 0 No -17 0.62 No 39 40.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48018775 + NM_000179 MSH6 0 . . . 5.6 70.9 29 5.48 No 63 1.23 Yes 0 0 No -28 0.91 Yes 47 38.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68583241 + NM_133509 RAD51B 0 . . . 3.61 0 32 5.81 Yes 18 0.3 No 0 0 No -31 0.81 Yes 40 91.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89673670 + NM_000314 PTEN 0 . . . 0.99 0 22 4.58 No 66 1.44 Yes 0 0 No -21 0.8 Yes 46 59.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89639509 + NM_000314 PTEN 0 . . . 0.81 71.89 30 6 Yes -2 0.33 No 0 0 No -29 0.93 Yes 48 43.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108225192 + NM_000051 ATM 0 . . . 2.08 0 35 5.66 Yes 67 -1.65 No 0 0 No -30 0.8 Yes 44 45.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131959225 + NM_005732 RAD50 0 . . . 3.54 0 22 4.69 No 13 0.82 Yes 0 0 No -19 0.51 No 45 63.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68725412 + NM_133509 RAD51B 0 . . . 2.35 76.37 19 4.8 No 24 1.01 Yes 0 0 No -24 0.84 Yes 34 89.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68705856 + NM_133509 RAD51B 0 . . . 1.62 73.36 39 4.97 No 34 0.62 No 0 0 No -17 0.56 No 24 61.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950206 + NM_005732 RAD50 0 . . . 0.69 65.57 40 6.16 Yes 57 -5.52 No 0 0 No -23 0.43 No 16 61.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56788484 + NM_058216 RAD51C 0 . . . 2.95 68.34 15 4.58 No 17 0.5 No 0 0 No -57 0.52 No 41 52.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68701507 + NM_133509 RAD51B 0 . . . 5.6 69.08 31 5.26 No 65 -4.19 No 0 0 No -24 0.61 No 45 85.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32888960 + NM_000059 BRCA2 0 . . . 1.25 73.77 40 6.4 Yes 58 0.15 No 0 0 No -39 0.63 No 43 52.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190711896 + NM_000534 PMS1 0 . . . 4.8 74.87 19 4.91 No 68 1.7 Yes 0 0 No -22 0.6 No 49 59.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29116125 - NM_001005735 CHEK2 0 . . . 1.73 76.63 57 7.54 Yes 67 -4.96 No 0 0 No -36 0.58 No 48 75.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90950407 - NM_002485 NBN 0 . . . 4.73 83 19 4.69 No 24 1.03 Yes 0 0 No -18 0.91 Yes 49 75.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69099563 + NM_133509 RAD51B 0 . . . 0.16 71.84 27 5.14 No 63 1.05 Yes 0 0 No -26 0.83 Yes 16 31.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47771735 + NM_000251 MSH2 0 . . . 0.77 0 22 4.79 No 12 0.49 No 0 0 No -21 0.76 Yes 46 66.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94169751 - NM_005591 MRE11 0 . . . 1.47 78.34 44 6.23 Yes 75 0.84 Yes 0 0 No -25 0.51 No 47 82.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69005556 + NM_133509 RAD51B 0 . . . 5.98 74.77 30 5.9 Yes -1 0.35 No 0 0 No -29 0.32 No 48 41.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56792240 + NM_058216 RAD51C 0 . . . 7.59 86.42 46 6.71 Yes 11 0.48 No 0 0 No -42 0.56 No 47 76.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69033217 + NM_133509 RAD51B 0 . . . 3.51 78.89 17 4.67 No 29 0.44 No 0 0 No -24 0.38 No 36 65.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108129374 + NM_000051 ATM 0 . . . 0.02 63.61 25 5.12 No 40 -3.06 No 0 0 No -25 0.66 No 24 28.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68312032 + NM_133509 RAD51B 0 . . . 1.57 64.9 33 5.92 Yes 66 1.21 Yes 0 0 No -32 0.68 Yes 50 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23614449 - NM_024675 PALB2 0 . . . 7.78 76.61 29 5.56 Yes 43 0.37 No 0 0 No -24 0.78 Yes 32 38.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37054890 + NM_000249 MLH1 0 . . . 1.08 81.75 15 4.58 No 67 -6.69 No 0 0 No -22 0.51 No 50 80.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131894080 + NM_005732 RAD50 0 . . . 7.32 70.15 26 5.1 No 10 1.69 Yes 0 0 No -24 0.54 No 48 74.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68612239 + NM_133509 RAD51B 0 . . . 1.99 68.51 20 5.57 Yes 71 0.38 No 0 0 No -19 0.75 Yes 34 51.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23629965 - NM_024675 PALB2 0 . . . 4.44 60.59 14 4.9 No 7 0.94 Yes 0 0 No -19 0.65 No 44 44.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21991209 - NM_000077 CDKN2A 0 . . . 9 80.83 17 5.83 Yes 4 0.16 No 0 0 No -25 0.51 No 49 65.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47707981 + NM_000251 MSH2 0 . . . 0.09 66.29 34 6.56 Yes 73 -5.05 No 0 0 No -30 0.21 No 60 30.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68768835 + NM_133509 RAD51B 0 . . . 3.17 71.15 14 5.23 No 67 -2.68 No 0 0 No -26 0.51 No 42 61.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37049494 + NM_000249 MLH1 0 . . . 1.78 76.63 17 5.48 No 68 -5.03 No 0 0 No -28 0.39 No 53 53.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47691826 + NM_000251 MSH2 0 . . . 2.03 69.74 22 4.9 No 67 0.34 No 0 0 No -21 0.62 No 47 52.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68767337 + NM_133509 RAD51B 0 . . . 3.65 0 39 6.56 Yes 66 0.28 No 0 0 No -33 0.48 No 47 33.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56786104 + NM_058216 RAD51C 0 . . . 8.81 88.21 31 5.54 No 54 1.99 Yes 0 0 No -30 0.8 Yes 46 72.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68714937 + NM_133509 RAD51B 0 . . . 2.61 0 22 5.87 Yes 14 0.61 No 0 0 No -21 0.51 No 31 64.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190732197 + NM_000534 PMS1 0 . . . 3.77 72.94 26 5.97 Yes -3 0.61 No 0 0 No -25 0.59 No 46 41.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1217841 + NM_000455 STK11 0 . . . 0.66 64.83 34 5.91 Yes 39 1.57 Yes 0 0 No -33 0.6 No 48 45.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68683701 + NM_133509 RAD51B 0 . . . 4.33 90.05 39 6.47 Yes 15 1.11 Yes 0 0 No -31 0.69 Yes 43 80.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108167079 + NM_000051 ATM 0 . . . 1.02 68.36 44 7.18 Yes 59 1.46 Yes 0 0 No -29 0.47 No 42 88.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68962272 + NM_133509 RAD51B 0 . . . 0.04 76.76 23 6.96 Yes -4 0.44 No 0 0 No -22 0.58 No 62 75.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68854855 + NM_133509 RAD51B 0 . . . 5.56 89.33 12 4 No 16 0.07 No 0 0 No -29 0.5 No 42 47.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47806515 + NM_000251 MSH2 0 . . . 7.58 85.29 15 5.03 No 40 0.56 No 0 0 No -23 0.82 Yes 18 49.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108222904 + NM_000051 ATM 0 . . . 4.22 73.17 24 5.48 No 10 -2.74 No 0 0 No -23 0.81 Yes 42 72.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68338206 + NM_133509 RAD51B 0 . . . 0.12 67.45 37 8.83 Yes 1 0.04 No 0 0 No -36 0.72 Yes 57 21.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68450432 + NM_133509 RAD51B 0 . . . 8.47 85.99 37 7.55 Yes 24 1.27 Yes 0 0 No -36 0.73 Yes 41 63.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68820495 + NM_133509 RAD51B 0 . . . 4.48 74.34 17 3.98 No 53 1.12 Yes 0 0 No -26 0.67 Yes 47 53.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32940688 + NM_000059 BRCA2 0 . . . 1.62 68 15 4.61 No 14 -3.14 No 0 0 No -26 0.53 No 35 66.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1208570 + NM_000455 STK11 0 . . . 2.89 68.34 16 5.17 No 21 1.7 Yes 0 0 No -20 0.64 No 37 67.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94214601 - NM_005591 MRE11 0 . . . 0.82 64.5 22 4.28 No 75 -5.64 No 0 0 No -60 0.66 Yes 52 30.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48008182 + NM_000179 MSH6 0 . . . 2.31 70.11 24 5.47 No 50 -1.59 No 0 0 No -53 0.41 No 46 61.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6041048 - NM_000535 PMS2 0 . . . 0.2 82.73 18 5.56 Yes 58 -3.89 No 0 0 No -27 0.47 No 53 34.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215643658 - NM_000465 BARD1 0 . . . 0.42 61.86 13 4.75 No 25 0.91 Yes 0 0 No -17 0.44 No 33 64.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6021974 - NM_000535 PMS2 0 . . . 0.36 61.05 23 4.39 No 57 1.08 Yes 0 0 No -43 0.5 No 42 41.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32969379 + NM_000059 BRCA2 0 . . . 5.17 84.53 41 6.48 Yes 12 0.2 No 0 0 No -40 0.79 Yes 48 64.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68898373 + NM_133509 RAD51B 0 . . . 8.11 81.29 31 5.56 Yes 50 1.14 Yes 0 0 No -24 0.42 No 43 69.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68855391 + NM_133509 RAD51B 0 . . . 5.94 74.81 16 5.1 No 7 1.25 Yes 0 0 No -21 0.36 No 47 91.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94196304 - NM_005591 MRE11 0 . . . 0.89 81.23 29 5.57 Yes 51 1.07 Yes 0 0 No -28 0.81 Yes 51 82.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68521668 + NM_133509 RAD51B 0 . . . 2.21 69.78 21 4.27 No 76 -4.6 No 0 0 No -25 0.61 No 46 34.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69099537 + NM_133509 RAD51B 0 . . . 4.64 84.95 19 4.58 No 37 1.07 Yes 0 0 No -22 0.62 No 42 68.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190663894 + NM_000534 PMS1 0 . . . 5.11 86.21 29 7.35 Yes 2 0.38 No 0 0 No -28 0.96 Yes 46 57.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59886745 - NM_032043 BRIP1 0 . . . 6.6 77.49 14 4.47 No 10 1.02 Yes 0 0 No -23 0.79 Yes 48 66.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68859540 + NM_004360 CDH1 0 . . . 6 92.37 16 4.47 No 46 -2.68 No 0 0 No -33 0.47 No 40 70.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48028998 + NM_000179 MSH6 0 . . . 2.48 85.17 25 5.2 No 9 0.23 No 0 0 No -28 0.86 Yes 49 57.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108239799 + NM_000051 ATM 0 . . . 1.94 70.09 22 5.29 No 64 0.62 No 0 0 No -21 0.77 Yes 28 72.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190661393 + NM_000534 PMS1 0 . . . 8.13 85.97 14 4.32 No 40 0.53 No 0 0 No -33 0.61 No 18 84.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48010917 + NM_000179 MSH6 0 . . . 3.5 77.18 36 5.91 Yes NA NA NA 0 0 No -25 0.57 No 47 27.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68691030 + NM_133509 RAD51B 0 . . . 0.88 71.64 39 6.48 Yes 71 -4.78 No 0 0 No -38 0.74 Yes 37 43.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37056323 + NM_000249 MLH1 0 . . . 1.92 72.35 30 6.06 Yes 73 0.8 Yes 0 0 No -29 0.91 Yes 42 70.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847395 + NM_133509 RAD51B 0 . . . 2.58 73.78 21 4.97 No -2 0.44 No 0 0 No -20 0.78 Yes 64 27.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41196246 - NM_007294 BRCA1 0 . . . 6.74 79.36 19 4.92 No 45 1.31 Yes 0 0 No -18 0.54 No 47 91.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68626655 + NM_133509 RAD51B 0 . . . 6.84 79.64 46 7.06 Yes 54 1.34 Yes 0 0 No -23 0.65 No 47 69.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41232177 - NM_007294 BRCA1 0 . . . 3.7 73.59 47 6.37 Yes 33 0.36 No 0 0 No -32 0.72 Yes 24 58.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68369924 + NM_133509 RAD51B 0 . . . 5.32 83.56 18 5.99 Yes 24 0.9 Yes 0 0 No -25 0.65 No 45 65.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59855849 - NM_032043 BRIP1 0 . . . 2.97 73.99 28 6.34 Yes 34 0.93 Yes 0 0 No -27 0.82 Yes 41 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75482522 - NM_001040108 MLH3 0 . . . 1.5 85.08 25 5.2 No 46 0.66 No 0 0 No -24 0.91 Yes 43 94.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68817710 + NM_004360 CDH1 0 . . . 2.86 0 15 4.58 No 45 1.15 Yes 0 0 No -55 0.64 No 49 60.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29114178 - NM_001005735 CHEK2 0 . . . 1.97 70.41 38 5.73 Yes 66 0.57 No 0 0 No -38 0.87 Yes 35 86.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190721291 + NM_000534 PMS1 0 . . . 6.3 72.2 36 5.64 Yes -1 0.81 Yes 0 0 No -30 0.77 Yes 48 94.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68736873 + NM_133509 RAD51B 0 . . . 7.15 78.58 29 6.36 Yes 20 0.93 Yes 0 0 No -28 0.65 No 38 95.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68826862 + NM_133509 RAD51B 0 . . . 3.67 68.58 26 5.48 No 64 0.45 No 0 0 No -23 0.51 No 47 74.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69117497 + NM_133509 RAD51B 0 . . . 8.17 91.58 27 5.73 Yes 16 0.47 No 28 0.87 Yes -26 0.58 No 42 95.2 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr7 105176787 + NM_021930 RINT1 0 . . . 3.6 85.02 32 5.06 No 4 1.2 Yes 0 0 No -23 0.31 No 54 77.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59841869 - NM_032043 BRIP1 0 . . . 3.59 81.97 35 5.81 Yes 55 0.52 No 0 0 No -9 0.43 No 45 55.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59801376 - NM_032043 BRIP1 0 . . . 5.69 73.2 24 5.26 No 9 0.09 No 0 0 No -27 0.54 No 46 28.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131938938 + NM_005732 RAD50 0 . . . 0.51 67.94 25 5.57 Yes 70 0.45 No 0 0 No -22 0.52 No 32 85.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108095694 + NM_000051 ATM 0 . . . 5.61 83.84 19 5.29 No 12 0.43 No 0 0 No -27 0.54 No 50 51.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89653472 + NM_000314 PTEN 0 . . . 10.38 97.39 13 5.37 No 43 1.42 Yes 0 0 No -27 0.82 Yes 47 58.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131975555 + NM_005732 RAD50 0 . . . 8.74 77.62 17 4.47 No 27 0.54 No 0 0 No -16 0.85 Yes 40 70.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90969066 - NM_002485 NBN 0 . . . 3.95 77.32 48 8.44 Yes 43 0.28 No 0 0 No -47 0.66 No 45 55.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68713000 + NM_133509 RAD51B 0 . . . 7.14 82.6 26 5.28 No 64 0.37 No 0 0 No -25 0.84 Yes 49 64.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68685163 + NM_133509 RAD51B 0 . . . 0.73 62.85 15 5.29 No 11 1.09 Yes 0 0 No -45 0.26 No 47 81.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37062543 + NM_000249 MLH1 0 . . . 0.91 0 15 4.64 No 15 1.14 Yes 0 0 No -22 0.62 No 43 72.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32930942 + NM_000059 BRCA2 0 . . . 2.09 73.2 34 7.7 Yes 0 0.06 No 0 0 No -33 0.66 No 47 38.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89711123 + NM_000314 PTEN 0 . . . 7.74 86.68 16 4.36 No 45 0.55 No 0 0 No -30 0.6 No 49 84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69089585 + NM_133509 RAD51B 0 . . . 2.27 0 17 4.23 No 34 -3.18 No 0 0 No -27 0.26 No 44 25.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94158548 - NM_005591 MRE11 0 . . . 2.72 79.1 15 6.84 Yes 6 0.45 No 0 0 No -29 0.81 Yes 51 90.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68872611 + NM_133509 RAD51B 0 . . . 5.07 76.82 16 3.76 No 59 -5.58 No 0 0 No -47 0.37 No 44 48.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23628697 - NM_024675 PALB2 0 . . . 6.62 80.22 20 4.16 No 43 0.6 No 0 0 No -22 0.58 No 46 46.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538069 + NM_133509 RAD51B 0 . . . 9.17 88.02 12 5 No 68 1.27 Yes 0 0 No -20 0.61 No 42 89.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68994233 + NM_133509 RAD51B 0 . . . 1.84 76.2 29 5.92 Yes 63 0.59 No 0 0 No -28 0.79 Yes 49 43.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68389766 + NM_133509 RAD51B 0 . . . 3.49 0 81 6.25 Yes 23 1.67 Yes 0 0 No -23 0.55 No 35 76.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68696254 + NM_133509 RAD51B 0 . . . 6.23 78.74 15 4.76 No 38 1.02 Yes 0 0 No -45 0.6 No 45 80.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89683354 + NM_000314 PTEN 0 . . . 1.95 77.5 19 7.07 Yes 11 0.14 No 0 0 No -18 0.76 Yes 47 95.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68908558 + NM_133509 RAD51B 0 . . . 2.66 83.15 16 6.69 Yes 50 0.38 No 0 0 No -15 0.39 No 47 83.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68800483 + NM_004360 CDH1 0 . . . 6.3 74.5 20 5.13 No 48 -4.41 No 0 0 No -19 0.51 No 46 53.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21978667 - NM_000077 CDKN2A 0 . . . 5.25 73.54 17 4.12 No 32 -3.76 No 0 0 No -39 0.43 No 45 81.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131950662 + NM_005732 RAD50 0 . . . 1.02 0 36 6.16 Yes 48 0.76 No 0 0 No -35 0.63 No 23 53.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7592052 - NM_000546 TP53 0 . . . 1.21 59.59 34 6.71 Yes 2 -1.94 No 0 0 No -33 0.87 Yes 41 69.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48023735 + NM_000179 MSH6 0 . . . 1.49 73.16 16 5 No 20 1.1 Yes 0 0 No -20 0.82 Yes 38 71.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215650816 - NM_000465 BARD1 0 . . . 4.4 81.72 24 4.05 No 69 0.81 Yes 0 0 No -23 0.63 No 45 73.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105186435 + NM_021930 RINT1 0 . . . 1.35 79.69 17 6.93 Yes 74 0.03 No 0 0 No -29 0.48 No 50 62.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41210167 - NM_007294 BRCA1 0 . . . 0.78 72.63 35 6.39 Yes 28 1.43 Yes 0 0 No -23 0.57 No 54 62.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68879019 + NM_133509 RAD51B 0 . . . 1.55 77.08 29 7.28 Yes 41 2.24 Yes 0 0 No -28 0.79 Yes 17 60.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52438469 - NM_004656 BAP1 0 . . . 8.82 76.59 15 4.29 No 16 0.12 No 0 0 No -56 0.49 No 51 76.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131939804 + NM_005732 RAD50 0 . . . 4.52 84.29 21 4.9 No 51 0.66 No 0 0 No -21 0.58 No 52 54.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41015481 + NM_001164269 RAD51 0 . . . 6.94 76.62 53 5.29 No 72 -3.1 No 0 0 No -24 0.46 No 46 58.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69075050 + NM_133509 RAD51B 0 . . . 4.38 77.57 10 4 No 50 -3.01 No 0 0 No -27 0.74 Yes 42 76.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68310926 + NM_133509 RAD51B 0 . . . 2.31 71.31 18 4.9 No 18 0.74 No 0 0 No -23 0.62 No 40 78.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41276394 - NM_007294 BRCA1 0 . . . 2.15 77.03 27 7.83 Yes 0 0.89 Yes 0 0 No -26 0.89 Yes 31 38.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68911652 + NM_133509 RAD51B 0 . . . 9.26 89.56 30 6.4 Yes 65 -2.6 No 0 0 No -29 0.5 No 40 57.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56803335 + NM_058216 RAD51C 0 . . . 1.64 0 28 5.38 No 26 0.06 No 0 0 No -54 0.4 No 32 40.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47688997 + NM_000251 MSH2 0 . . . 1.56 68.34 58 6.97 Yes 21 1.69 Yes 0 0 No -26 0.75 Yes 37 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33437035 - NM_002878 RAD51D 0 . . . 3.96 66.39 24 6.13 Yes -4 0.38 No 0 0 No -24 0.69 Yes 50 75.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41221753 - NM_007294 BRCA1 0 . . . 6.06 77.94 13 5.2 No 32 1.68 Yes 0 0 No -26 0.64 No 48 89.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41231072 - NM_007294 BRCA1 0 . . . 0.21 68.06 23 5 No 51 0.23 No 0 0 No -22 0.88 Yes 48 71.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68550107 + NM_133509 RAD51B 0 . . . 3.36 79.08 34 7.26 Yes -1 0.38 No 0 0 No -31 0.36 No 46 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104175251 - NM_001100119 XRCC3 0 . . . 7.24 79.01 32 6.15 Yes 51 0.03 No 0 0 No -34 0.48 No 43 66.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68539386 + NM_133509 RAD51B 0 . . . 3.54 81.08 20 5.1 No -2 0.54 No 0 0 No -19 0.93 Yes 47 92.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68707637 + NM_133509 RAD51B 0 . . . 3.91 73.56 26 6.04 Yes 29 0.34 No 0 0 No -26 0.53 No 50 72.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68874432 + NM_133509 RAD51B 0 . . . 1.82 82.3 26 6.04 Yes 57 -2.98 No 0 0 No -25 0.74 Yes 42 58.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59880977 - NM_032043 BRIP1 0 . . . 1.19 0 44 5.06 No 20 0.47 No 0 0 No -28 0.61 No 47 37.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215656055 - NM_000465 BARD1 0 . . . 4.07 83.55 38 6.61 Yes 3 0.99 Yes 0 0 No -24 0.3 No 41 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108217956 + NM_000051 ATM 0 . . . 0.63 66.05 24 5.39 No 70 -6.13 No 0 0 No -28 0.36 No 45 78.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108126543 + NM_000051 ATM 0 . . . 4.3 89.44 28 5.35 No 10 0.15 No 0 0 No -22 0.46 No 52 50.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69123365 + NM_133509 RAD51B 0 . . . 0.86 66.62 26 4.64 No 8 -0.98 No 0 0 No -25 0.62 No 50 32.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68876779 + NM_133509 RAD51B 0 . . . 4.63 81.83 33 5.69 Yes 10 1.48 Yes 0 0 No -32 0.78 Yes 48 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68605838 + NM_133509 RAD51B 0 . . . 3.82 64.94 38 6.34 Yes 1 0.55 No 0 0 No -15 0.52 No 43 82.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68377553 + NM_133509 RAD51B 0 . . . 2.61 0 30 4.64 No 76 0.78 Yes 0 0 No -29 0.75 Yes 37 58.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47633549 + NM_000251 MSH2 0 . . . 2.07 76.01 17 7.62 Yes 60 1.06 Yes 0 0 No -16 0.42 No 45 76.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59756016 - NM_032043 BRIP1 0 . . . 3.49 78.73 23 5.38 No 64 0.55 No 0 0 No -56 0.24 No 54 52.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68938082 + NM_133509 RAD51B 0 . . . 3.61 68.39 33 5.33 No 37 1.18 Yes 0 0 No -26 0.55 No 21 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68791752 + NM_133509 RAD51B 0 . . . 2.48 62.78 28 5.74 Yes 47 1.53 Yes 0 0 No -28 0.64 No 41 81.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105177840 + NM_021930 RINT1 0 . . . 6.88 74.08 57 8.52 Yes 23 1.72 Yes 0 0 No -23 0.47 No 45 81.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37053060 + NM_000249 MLH1 0 . . . 2.81 82.23 26 5.02 No 7 0.69 No 0 0 No -25 0.77 Yes 51 36.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94188821 - NM_005591 MRE11 0 . . . 1.09 56.09 16 4.69 No 64 -2.84 No 0 0 No -23 0.5 No 42 43.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37035525 + NM_000249 MLH1 0 . . . 0.94 82.13 25 4.77 No 63 -5.14 No 0 0 No -24 0.51 No 43 87.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89700536 + NM_000314 PTEN 0 . . . 2.07 58.66 21 5.02 No -3 0.22 No 0 0 No -44 0.37 No 56 40.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94176856 - NM_005591 MRE11 0 . . . 3.27 70.52 25 4.8 No 50 0.74 No 0 0 No -24 0.39 No 44 95.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68452015 + NM_133509 RAD51B 0 . . . 0.31 68.53 27 5.57 Yes 65 0.12 No 0 0 No -26 0.86 Yes 15 46.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47784885 + NM_000251 MSH2 0 . . . 0.97 0 28 5.56 Yes 26 -1.47 No 0 0 No -27 0.91 Yes 60 27.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41270127 - NM_007294 BRCA1 0 . . . 1.68 0 15 6.21 Yes 44 0.87 Yes 0 0 No -23 0.86 Yes 46 74.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6030481 - NM_000535 PMS2 0 . . . 5.91 85.02 15 5.33 No 9 1.76 Yes 0 0 No -22 0.37 No 49 84.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68467078 + NM_133509 RAD51B 0 . . . 6.81 77.32 18 4.49 No 33 1.61 Yes 0 0 No -17 0.56 No 25 80.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37087737 + NM_000249 MLH1 0 . . . 2.01 78.7 36 6.55 Yes 60 1.42 Yes 0 0 No -35 0.79 Yes 52 81.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69141708 + NM_133509 RAD51B 0 . . . 6.42 77.82 12 4 No 11 0.4 No 0 0 No -36 0.45 No 47 75.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68390488 + NM_133509 RAD51B 0 . . . 1.24 56.62 32 6.85 Yes 43 1.24 Yes 0 0 No -31 0.91 Yes 12 39.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59933957 - NM_032043 BRIP1 0 . . . 5.38 79.24 27 5.29 No 5 0.34 No 0 0 No -24 0.69 Yes 42 64.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90996225 - NM_002485 NBN 0 . . . 10.55 85.84 19 5.09 No 70 0.82 Yes 0 0 No -23 0.7 Yes 48 41.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47713562 + NM_000251 MSH2 0 . . . 8.84 83.82 34 6.23 Yes 29 0.51 No 0 0 No -33 0.54 No 47 93.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56781752 + NM_058216 RAD51C 0 . . . 0.7 84.22 31 5.85 Yes 33 0.6 No 0 0 No -31 0.54 No 50 69.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23630247 - NM_024675 PALB2 0 . . . 4.91 84.16 13 4.79 No -3 0.56 No 0 0 No -21 0.69 Yes 43 54.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68770249 + NM_004360 CDH1 0 . . . 3.97 78.93 15 5.62 Yes 74 0.06 No 0 0 No -28 0.37 No 47 96.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108104557 + NM_000051 ATM 0 . . . 0.33 0 29 7.68 Yes 53 -4.2 No 0 0 No -28 0.9 Yes 35 61.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68683292 + NM_133509 RAD51B 0 . . . 2.88 0 18 4.9 No 13 0.12 No 0 0 No -43 0.32 No 36 41.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47691491 + NM_000251 MSH2 0 . . . 1.97 56.99 34 7.29 Yes 63 -4.99 No 0 0 No -28 0.68 Yes 40 63.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105185475 + NM_021930 RINT1 0 . . . 0.11 69.8 37 6.68 Yes 48 1.39 Yes 0 0 No -30 0.62 No 10 30.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105179926 + NM_021930 RINT1 0 . . . 3.92 89.35 28 6.13 Yes 33 1.12 Yes 0 0 No -27 0.93 Yes 25 59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190652147 + NM_000534 PMS1 0 . . . 0.63 65.58 52 7.42 Yes 43 0.34 No 0 0 No -30 0.58 No 42 75.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59831949 - NM_032043 BRIP1 0 . . . 4.26 82.01 13 3.09 No 18 0.54 No 0 0 No -32 0.55 No 45 84.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68450617 + NM_133509 RAD51B 0 . . . 3.44 74.43 21 4.79 No 67 0.06 No 0 0 No -20 0.37 No 55 48.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68888219 + NM_133509 RAD51B 0 . . . 7.47 78.75 37 7.21 Yes 29 0.05 No 0 0 No -37 0.91 Yes 39 39.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68673859 + NM_133509 RAD51B 0 . . . 1.83 0 42 7.14 Yes 10 -2.33 No 0 0 No -41 0.72 Yes 49 38.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68919184 + NM_133509 RAD51B 0 . . . 7.03 84.54 28 6.16 Yes 17 0.85 Yes 0 0 No -24 0.55 No 41 68.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68751779 + NM_133509 RAD51B 0 . . . 1.74 78.46 36 6.35 Yes 52 2.04 Yes 0 0 No -35 0.51 No 18 81.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68861358 + NM_004360 CDH1 0 . . . 2.46 82.63 44 6.58 Yes 35 0.48 No 0 0 No -43 0.79 Yes 51 83.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190673956 + NM_000534 PMS1 0 . . . 5.92 77.69 24 5.53 No 19 0.15 No 0 0 No -27 0.57 No 47 67.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69108346 + NM_133509 RAD51B 0 . . . 5.36 77.23 25 6.08 Yes 62 0.15 No 0 0 No -24 0.8 Yes 47 68.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108190154 + NM_000051 ATM 0 . . . 9.9 86.8 16 4.98 No 43 -0.51 No 0 0 No -24 0.92 Yes 44 85.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75495451 - NM_001040108 MLH3 0 . . . 3.99 67.99 17 5.29 No 31 0.54 No 0 0 No -21 0.66 No 27 75.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37079115 + NM_000249 MLH1 0 . . . 6.66 78.6 13 4.24 No 6 0.93 Yes 0 0 No -18 0.5 No 47 70.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190691494 + NM_000534 PMS1 0 . . . 0.82 0 24 5.23 No 27 0.97 Yes 0 0 No -23 0.77 Yes 31 67.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105202219 + NM_021930 RINT1 0 . . . 1.64 77.77 38 6.08 Yes 33 0.59 No 0 0 No -27 0.84 Yes 42 63.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41019158 + NM_001164269 RAD51 0 . . . 2.32 66.96 25 6.19 Yes 48 0.19 No 0 0 No -24 0.87 Yes 53 47.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105193165 + NM_021930 RINT1 0 . . . 3.67 84 22 4.84 No 2 1.5 Yes 0 0 No -30 0.68 Yes 13 76.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75517806 - NM_001040108 MLH3 0 . . . 3.89 73.24 21 4.26 No NA NA NA 0 0 No -23 0.5 No 50 66.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108126430 + NM_000051 ATM 0 . . . 1.22 76.14 23 4.84 No 37 1.54 Yes 0 0 No -22 0.75 Yes 21 49.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108105421 + NM_000051 ATM 0 . . . 0.04 56.59 30 6.63 Yes 56 -2.15 No 0 0 No -29 0.79 Yes 34 54.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105194464 + NM_021930 RINT1 0 . . . 4.42 84.22 21 5.2 No 76 1.48 Yes 0 0 No -20 0.74 Yes 50 87.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104182668 - NM_001100119 XRCC3 0 . . . 1.69 72.05 40 4.72 No NA NA NA 0 0 No -22 0.47 No 17 25.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190658228 + NM_000534 PMS1 0 . . . 2.12 68.24 36 6.31 Yes 43 -3.74 No 0 0 No -35 0.66 No 46 54.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215613837 - NM_000465 BARD1 0 . . . 1.64 80.97 14 5.36 No 16 -1.74 No 0 0 No -23 0.54 No 24 29.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68530096 + NM_133509 RAD51B 0 . . . 3.65 58.88 13 5.74 Yes 9 0.27 No 0 0 No -24 0.45 No 40 58.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108202794 + NM_000051 ATM 0 . . . 4.85 75.78 38 6.46 Yes 41 0.68 No 0 0 No -37 0.58 No 52 53.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68879733 + NM_133509 RAD51B 0 . . . 3.75 0 17 5.57 Yes 35 0.98 Yes 0 0 No -24 0.7 Yes 43 96.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59762901 - NM_032043 BRIP1 0 . . . 0.69 61.74 21 5.1 No 49 0.08 No 0 0 No -45 0.92 Yes 44 74.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52437391 - NM_004656 BAP1 0 . . . 3.78 81.8 22 4.84 No 62 -4.49 No 0 0 No -22 0.8 Yes 48 85.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47699447 + NM_000251 MSH2 0 . . . 6.49 80.93 19 4.19 No 62 -4.21 No 0 0 No -24 0.56 No 49 47.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68400910 + NM_133509 RAD51B 0 . . . 2.67 74.76 15 4.58 No 56 1.02 Yes 0 0 No -37 0.2 No 47 54.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68310068 + NM_133509 RAD51B 0 . . . 2.01 82.92 19 5 No 58 1.88 Yes 0 0 No -24 0.54 No 26 47.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29124365 - NM_001005735 CHEK2 0 . . . 7.92 79.51 15 5.37 No 42 0.74 No 0 0 No -26 0.39 No 44 83.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68820978 + NM_133509 RAD51B 0 . . . 4.44 78.78 45 6.68 Yes 59 1.98 Yes 0 0 No -22 0.73 Yes 45 38.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59848026 - NM_032043 BRIP1 0 . . . 6.12 77.86 20 5.48 No 4 1.11 Yes 0 0 No -11 0.23 No 48 71.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69151295 + NM_133509 RAD51B 0 . . . 1.24 79.78 9 6.24 Yes 18 0.43 No 0 0 No -35 0.41 No 51 85.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90949945 - NM_002485 NBN 0 . . . 2.45 81.03 38 5.48 No 35 -4.12 No 0 0 No -30 0.75 Yes 50 49.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68441842 + NM_133509 RAD51B 0 . . . 2.38 69.75 19 5.83 Yes 6 1.06 Yes 0 0 No -27 0.65 No 44 47.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89692618 + NM_000314 PTEN 0 . . . 4.2 68.87 23 4.8 No 54 0.73 No 0 0 No -23 0.63 No 39 95.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56811010 + NM_058216 RAD51C 0 . . . 2.3 74.55 19 5.69 Yes 58 0.44 No 0 0 No -22 0.74 Yes 39 37.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108228116 + NM_000051 ATM 0 . . . 2.46 79.22 30 9.34 Yes 39 -2.69 No 0 0 No -29 0.63 No 34 27.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68821426 + NM_133509 RAD51B 0 . . . 2.33 71.47 20 5 No 71 -5.86 No 0 0 No -19 0.87 Yes 45 46.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52441802 - NM_004656 BAP1 0 . . . 3.49 76.18 44 7.25 Yes 43 0.45 No 0 0 No -31 0.69 Yes 45 27.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41206240 - NM_007294 BRCA1 0 . . . 7.97 88.84 18 4.9 No 13 0.21 No 0 0 No -17 0.35 No 45 78.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32952762 + NM_000059 BRCA2 0 . . . 0.07 66.6 21 6.31 Yes 39 0.42 No 0 0 No -20 0.72 Yes 50 77.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152372512 - NM_005431 XRCC2 0 . . . 4.31 66.71 32 5.33 No 12 1 Yes 0 0 No -31 0.62 No 46 92.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23616177 - NM_024675 PALB2 0 . . . 5.49 87.06 17 5.08 No 58 1.02 Yes 0 0 No -21 0.48 No 49 73.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32922478 + NM_000059 BRCA2 0 . . . 4.8 76.89 21 4.25 No 15 0.25 No 0 0 No -24 0.43 No 61 41.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75483016 - NM_001040108 MLH3 0 . . . 1.94 67.62 16 4.95 No 31 0.36 No 0 0 No -45 0.75 Yes 39 46.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6018995 - NM_000535 PMS2 0 . . . 3.14 81.92 16 5.29 No 33 0.5 No 0 0 No -21 0.61 No 20 61.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48013052 + NM_000179 MSH6 0 . . . 0.79 67.71 20 5.1 No 6 0.71 No 0 0 No -28 0.64 No 36 40.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68307438 + NM_133509 RAD51B 0 . . . 3.4 80.95 19 4.69 No 42 0.08 No 0 0 No -28 0.56 No 46 42.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69084671 + NM_133509 RAD51B 0 . . . 5.08 80.3 22 5.29 No 62 0.32 No 0 0 No -24 0.36 No 39 49.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59792110 - NM_032043 BRIP1 0 . . . 1.42 73.09 11 4.12 No 59 -4.41 No 0 0 No -25 0.68 Yes 54 24.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47719508 + NM_000251 MSH2 0 . . . 0.41 62.35 16 4.14 No 67 0.74 No 0 0 No -26 0.68 Yes 46 45.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37055179 + NM_000249 MLH1 0 . . . 3.8 81.26 16 5.64 Yes 54 0.92 Yes 0 0 No -25 0.45 No 50 55.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68789690 + NM_004360 CDH1 0 . . . 3.01 0 21 5.04 No 17 1.28 Yes 0 0 No -20 0.65 No 41 78.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68702676 + NM_133509 RAD51B 0 . . . 1.13 64.46 22 5.91 Yes 0 0.63 No 0 0 No -21 0.6 No 58 50.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68656156 + NM_133509 RAD51B 0 . . . 1.97 63.28 17 4.36 No 58 0.87 Yes 0 0 No -24 0.3 No 35 52.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84400113 - NM_139076 FAM175A 0 . . . 6.87 84.01 41 6.19 Yes 28 1.16 Yes 0 0 No -41 0.41 No 30 76.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68936589 + NM_133509 RAD51B 0 . . . 3.13 70.06 24 5.1 No -4 0.69 No 0 0 No -23 0.81 Yes 48 80.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68358999 + NM_133509 RAD51B 0 . . . 0.07 58.23 42 9.39 Yes 67 0.54 No 0 0 No -41 0.84 Yes 49 60.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75504271 - NM_001040108 MLH3 0 . . . 3.93 68.97 20 5.5 No 56 0.91 Yes 0 0 No -24 0.63 No 40 61.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108186572 + NM_000051 ATM 0 . . . 0.12 0 44 6.94 Yes 67 1.12 Yes 0 0 No -25 0.64 No 21 79.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89717285 + NM_000314 PTEN 0 . . . 6.07 84.62 15 5.54 No 14 0.44 No 0 0 No -24 0.72 Yes 50 62.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94199178 - NM_005591 MRE11 0 . . . 8.6 78.45 20 4.34 No 0 1.28 Yes 0 0 No -36 0.58 No 42 93.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37090691 + NM_000249 MLH1 0 . . . 0.04 72.05 20 7.14 Yes 30 0.48 No 0 0 No -19 0.79 Yes 28 82.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190713078 + NM_000534 PMS1 0 . . . 0.06 65.22 31 6.85 Yes 74 -4.54 No 0 0 No -30 0.78 Yes 49 28.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68586786 + NM_133509 RAD51B 0 . . . 2.86 74.81 19 5 No 67 1.68 Yes 0 0 No -18 0.86 Yes 35 98.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215617424 - NM_000465 BARD1 0 . . . 0.71 0 48 7.75 Yes 19 0.32 No 0 0 No -47 0.89 Yes 46 32.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32948948 + NM_000059 BRCA2 0 . . . 4.41 72.71 24 6.95 Yes 26 0.86 Yes 0 0 No -23 0.67 Yes 41 37.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1224220 + NM_000455 STK11 0 . . . 4.19 75.14 20 7.14 Yes NA NA NA 0 0 No -32 0.57 No 50 63.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152342858 - NM_005431 XRCC2 0 . . . 4.92 66.53 29 5.29 No 46 0.8 Yes 0 0 No -28 0.73 Yes 48 63.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89712799 + NM_000314 PTEN 0 . . . 3.57 0 31 5.63 Yes 24 1.59 Yes 0 0 No -30 0.6 No 34 78.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69078770 + NM_133509 RAD51B 0 . . . 1.53 70.26 28 5.29 No 62 -5.22 No 0 0 No -27 0.72 Yes 52 59.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190666789 + NM_000534 PMS1 0 . . . 2.94 78.57 29 7.35 Yes 48 1.28 Yes 0 0 No -28 0.95 Yes 41 87.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108207592 + NM_000051 ATM 0 . . . 4.7 75.92 21 7.28 Yes 27 1.2 Yes 0 0 No -20 0.88 Yes 41 60.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68504761 + NM_133509 RAD51B 0 . . . 3.39 0 22 3.4 No 11 0.95 Yes 0 0 No -21 0.81 Yes 46 69.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108156708 + NM_000051 ATM 0 . . . 0.48 76.57 16 5.56 Yes 4 0.51 No 0 0 No -28 0.56 No 37 65.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108099839 + NM_000051 ATM 0 . . . 2.9 61.72 19 5 No 70 0.58 No 0 0 No -18 0.67 Yes 40 57.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68818829 + NM_004360 CDH1 0 . . . 5.29 75.09 12 4.24 No 54 1.56 Yes 0 0 No -29 0.63 No 47 71.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68458337 + NM_133509 RAD51B 0 . . . 1.69 67.64 14 4.47 No 31 0.32 No 0 0 No -35 0.75 Yes 26 29.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37053261 + NM_000249 MLH1 0 . . . 0.93 67.91 41 8.42 Yes 22 1.22 Yes 0 0 No -40 0.82 Yes 45 43.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69060544 + NM_133509 RAD51B 0 . . . 0.77 71.09 21 5.1 No 5 0.53 No 0 0 No -20 0.73 Yes 48 54.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47705199 + NM_000251 MSH2 0 . . . 5.58 69.13 10 3.15 No 13 0.92 Yes 0 0 No -29 0.73 Yes 40 69.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32915168 + NM_000059 BRCA2 0 . . . 0.62 76.2 40 4.93 No 60 1.54 Yes 0 0 No -28 0.37 No 50 68.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68756649 + NM_133509 RAD51B 0 . . . 5.86 82.61 53 7.66 Yes 1 0.72 No 0 0 No -26 0.67 Yes 36 80.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68522994 + NM_133509 RAD51B 0 . . . 1.51 80.65 47 6.89 Yes 33 1.06 Yes 0 0 No -42 0.4 No 50 79.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59880497 - NM_032043 BRIP1 0 . . . 5.54 80.14 26 5.63 Yes 63 -4.2 No 0 0 No -25 0.45 No 50 61.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6038298 - NM_000535 PMS2 0 . . . 4.63 84.95 45 6.71 Yes 14 0.07 No 0 0 No -31 0.47 No 44 77.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59892312 - NM_032043 BRIP1 0 . . . 2.24 73.93 27 5.2 No 70 1.49 Yes 0 0 No -26 0.59 No 32 81.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37057339 + NM_000249 MLH1 0 . . . 5.43 86.08 34 4.94 No 20 0.91 Yes 0 0 No -33 0.36 No 38 92.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215626540 - NM_000465 BARD1 0 . . . 2.51 73.36 93 7.61 Yes 35 0.52 No 0 0 No -43 0.84 Yes 31 57.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41014715 + NM_001164269 RAD51 0 . . . 4.16 78.31 25 5 No 56 -3.03 No 0 0 No -27 0.84 Yes 48 50.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131894559 + NM_005732 RAD50 0 . . . 1.22 74.91 18 5.25 No 55 -3.7 No 0 0 No -23 0.58 No 50 79.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215590065 - NM_000465 BARD1 0 . . . 3.28 73.91 21 5.2 No 68 1.41 Yes 0 0 No -20 0.92 Yes 48 92.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68870772 + NM_133509 RAD51B 0 . . . 2.69 0 23 5.48 No 11 0.4 No 0 0 No -22 0.5 No 48 50.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68824984 + NM_133509 RAD51B 0 . . . 0.25 63.55 17 4.79 No 68 -5.75 No 0 0 No -16 0.24 No 49 35.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47629407 + NM_000251 MSH2 0 . . . 3.38 85.23 16 5.47 No 33 1.4 Yes 0 0 No -26 0.55 No 50 88.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47681438 + NM_000251 MSH2 0 . . . 1.13 67.51 17 4.79 No 47 1.13 Yes 0 0 No -22 0.24 No 52 38.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1214258 + NM_000455 STK11 0 . . . 0.32 76.77 26 5 No 24 1.13 Yes 0 0 No -53 0.77 Yes 34 64.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29119093 - NM_001005735 CHEK2 0 . . . 4.16 64.19 22 5.96 Yes 74 0.31 No 0 0 No -21 0.75 Yes 37 35.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94219873 - NM_005591 MRE11 0 . . . 3.83 66.26 27 4.41 No 70 0.59 No 0 0 No -26 0.73 Yes 52 61.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152362384 - NM_005431 XRCC2 0 . . . 6.18 81.38 22 5.42 No 1 0.1 No 0 0 No -26 0.8 Yes 40 66.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68866092 + NM_133509 RAD51B 0 . . . 4.42 84.22 18 4.47 No 8 1.13 Yes 0 0 No -17 0.49 No 50 75.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68557165 + NM_133509 RAD51B 0 . . . 0.03 66.61 25 4.9 No 29 0.85 Yes 0 0 No -24 0.95 Yes 16 59.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59859279 - NM_032043 BRIP1 0 . . . 4.64 84.41 20 5.27 No 16 0.32 No 0 0 No -19 0.62 No 42 86.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68887971 + NM_133509 RAD51B 0 . . . 1.73 73.37 27 5.2 No 53 0.99 Yes 0 0 No -26 0.39 No 48 65.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41270277 - NM_007294 BRCA1 0 . . . 4.2 78.45 19 5.57 Yes 31 1.21 Yes 0 0 No -21 0.58 No 42 58.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90984721 - NM_002485 NBN 0 . . . 3.54 68.77 15 5.2 No 68 1.22 Yes 0 0 No -28 0.67 Yes 39 74.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68839298 + NM_133509 RAD51B 0 . . . 0.24 76.01 28 5.48 No 72 0.02 No 0 0 No -27 0.67 Yes 47 59.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47769728 + NM_000251 MSH2 0 . . . 7.73 75.83 19 5.87 Yes 58 -4.17 No 0 0 No -34 0.42 No 38 66.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131909914 + NM_005732 RAD50 0 . . . 6.15 76.96 22 5.15 No 75 0.32 No 0 0 No -21 0.82 Yes 45 84.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152348736 - NM_005431 XRCC2 0 . . . 2.33 65.44 23 6.34 Yes 2 0.01 No 0 0 No -22 0.88 Yes 42 41.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68540502 + NM_133509 RAD51B 0 . . . 4.98 80.02 21 5.1 No 12 0.45 No 0 0 No -55 0.69 Yes 46 66.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215608030 - NM_000465 BARD1 0 . . . 0.9 0 24 7.05 Yes 72 0.46 No 0 0 No -23 0.7 Yes 25 64.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90988640 - NM_002485 NBN 0 . . . 0.54 0 80 9.16 Yes 17 0.91 Yes 0 0 No -38 0.5 No 40 69.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40999606 + NM_001164269 RAD51 0 . . . 2.53 68.36 16 5.57 Yes 59 1.47 Yes 0 0 No -24 0.63 No 42 87.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41205367 - NM_007294 BRCA1 0 . . . 7.78 74.22 46 6.6 Yes 67 -2.63 No 0 0 No -38 0.62 No 48 72.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68471450 + NM_133509 RAD51B 0 . . . 1.8 73.82 18 3.83 No 64 -4.45 No 0 0 No -28 0.78 Yes 49 31.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41231500 - NM_007294 BRCA1 0 . . . 1.49 0 13 3.93 No 42 1.12 Yes 0 0 No -49 0.65 No 51 53.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47635846 + NM_000251 MSH2 0 . . . 1.71 69.24 35 6.08 Yes 73 0.29 No 0 0 No -35 0.44 No 46 70.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48032210 + NM_000179 MSH6 0 . . . 0.01 0 34 5.44 No 39 0.54 No 0 0 No -33 0.77 Yes 48 51.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68691620 + NM_133509 RAD51B 0 . . . 3.12 78.09 27 5.18 No 32 0.98 Yes 0 0 No -26 0.6 No 26 33.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152366268 - NM_005431 XRCC2 0 . . . 1.77 81.83 18 5.36 No 32 1.05 Yes 0 0 No -32 0.68 Yes 19 82.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23652737 - NM_024675 PALB2 0 . . . 2.93 68.89 40 8.26 Yes -4 0.41 No 0 0 No -26 0.84 Yes 62 17.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37090092 + NM_000249 MLH1 0 . . . 4.7 73.25 28 5.57 Yes 61 0.77 No 0 0 No -27 0.35 No 15 50.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648542 - NM_024675 PALB2 0 . . . 1.38 76.08 36 5.66 Yes 2 1.47 Yes 0 0 No -25 0.61 No 56 43.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47747170 + NM_000251 MSH2 0 . . . 0.55 73.87 16 4.69 No 69 -4.05 No 0 0 No -58 0.67 Yes 45 79.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68779086 + NM_133509 RAD51B 0 . . . 1.98 72.34 26 5.48 No 41 1.21 Yes 0 0 No -20 0.59 No 17 61.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68754345 + NM_133509 RAD51B 0 . . . 2.66 0 26 4.9 No 1 0.72 No 0 0 No -25 0.45 No 53 54.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37068219 + NM_000249 MLH1 0 . . . 2.11 80.22 33 5.52 No 58 -3.79 No 0 0 No -32 0.42 No 48 35.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104163990 - NM_001100119 XRCC3 0 . . . 4.25 73.82 27 5.05 No 58 1.88 Yes 0 0 No -22 0.73 Yes 43 85.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68592968 + NM_133509 RAD51B 0 . . . 0.55 0 36 5.15 No 70 1.05 Yes 0 0 No -25 0.6 No 51 91.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68319020 + NM_133509 RAD51B 0 . . . 4.54 74.61 24 5.48 No 26 0.36 No 0 0 No -23 0.42 No 48 51.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41228888 - NM_007294 BRCA1 0 . . . 3.19 0 21 5.04 No 1 0.28 No 0 0 No -20 0.44 No 41 65.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69085747 + NM_133509 RAD51B 0 . . . 0.82 68.21 12 4.12 No 25 0.95 Yes 0 0 No -44 0.68 Yes 33 78.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59907614 - NM_032043 BRIP1 0 . . . 5.99 80.69 16 4.35 No 32 0.93 Yes 0 0 No -15 0.57 No 37 61.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68349923 + NM_133509 RAD51B 0 . . . 2.54 73.94 21 5.16 No 15 1.54 Yes 0 0 No -37 0.68 Yes 43 69.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152347894 - NM_005431 XRCC2 0 . . . 7.13 89.75 30 5.53 No 9 1 Yes 0 0 No -29 0.76 Yes 49 85.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69026536 + NM_133509 RAD51B 0 . . . 3.22 77.16 37 5.31 No 42 0.13 No 0 0 No -31 0.44 No 46 82.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68868551 + NM_004360 CDH1 0 . . . 5.97 70.74 9 3.87 No 55 0.79 Yes 0 0 No -25 0.94 Yes 35 61.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6030819 - NM_000535 PMS2 0 . . . 6.76 74.71 17 4.8 No 13 0.45 No 0 0 No -16 0.48 No 38 67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131958621 + NM_005732 RAD50 0 . . . 4.48 76.32 13 3.99 No -3 0.71 No 0 0 No -24 0.67 Yes 44 92.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89624421 + NM_000314 PTEN 0 . . . 4.46 79.15 19 4.19 No 76 0.33 No 0 0 No -28 0.93 Yes 46 73.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89629846 + NM_000314 PTEN 0 . . . 3.92 75.09 30 5.46 No 52 0.82 Yes 0 0 No -23 0.48 No 46 58.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41258073 - NM_007294 BRCA1 0 . . . 4.72 71.69 15 4.35 No 30 -2.19 No 0 0 No -9 0.35 No 44 64.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190712024 + NM_000534 PMS1 0 . . . 3.4 0 20 7.14 Yes 76 1.25 Yes 0 0 No -19 0.75 Yes 44 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94152094 - NM_005591 MRE11 0 . . . 2.04 67.82 24 5.48 No -4 0.36 No 0 0 No -23 0.5 No 45 74.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131972020 + NM_005732 RAD50 0 . . . 2.26 0 34 4.81 No 41 0.8 Yes 0 0 No -28 0.78 Yes 39 50.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47648479 + NM_000251 MSH2 0 . . . 0.05 62.64 17 5.2 No 67 1.27 Yes 0 0 No -26 0.39 No 54 39.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59941403 - NM_032043 BRIP1 0 . . . 8.19 74.14 22 4.97 No 13 0.94 Yes 0 0 No -27 0.41 No 45 75.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94179765 - NM_005591 MRE11 0 . . . 3.56 77.88 34 6.25 Yes 23 1.3 Yes 0 0 No -33 0.59 No 43 75.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152348576 - NM_005431 XRCC2 0 . . . 3.17 82.4 19 5.85 Yes 3 1.22 Yes 0 0 No -23 0.92 Yes 50 63.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59800635 - NM_032043 BRIP1 0 . . . 5.9 85.02 17 5.29 No -1 1.43 Yes 0 0 No -21 0.58 No 47 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215603454 - NM_000465 BARD1 0 . . . 2.91 75.6 15 5.2 No 31 1.11 Yes 0 0 No -44 0.42 No 27 36.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90973682 - NM_002485 NBN 0 . . . 2.27 73.55 29 6.41 Yes 50 1.07 Yes 0 0 No -28 0.32 No 45 75.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75502079 - NM_001040108 MLH3 0 . . . 2.26 70.68 38 4.73 No 44 0.7 No 0 0 No -19 0.62 No 47 64.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68715855 + NM_133509 RAD51B 0 . . . 0.46 75.08 16 4.8 No 73 0.86 Yes 0 0 No -25 0.72 Yes 44 77.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68372179 + NM_133509 RAD51B 0 . . . 0.07 54.14 30 5.23 No 28 -1.85 No 0 0 No -23 0.72 Yes 32 47.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32911589 + NM_000059 BRCA2 0 . . . 1.59 73.79 15 5.28 No 58 -3.99 No 0 0 No -26 0.62 No 46 69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152351761 - NM_005431 XRCC2 0 . . . 6.29 77.79 14 4.47 No 53 1.45 Yes 0 0 No -36 0.78 Yes 46 60.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32943731 + NM_000059 BRCA2 0 . . . 0.69 83 32 7.55 Yes 74 0.86 Yes 0 0 No -31 0.82 Yes 41 58.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69055888 + NM_133509 RAD51B 0 . . . 0.11 68.37 13 5 No 4 0.06 No 0 0 No -15 0.29 No 54 53.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68740020 + NM_133509 RAD51B 0 . . . 2.46 69.78 34 6.08 Yes 52 0.25 No 0 0 No -33 0.95 Yes 45 44.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75515426 - NM_001040108 MLH3 0 . . . 3.73 74.76 24 4.27 No -4 0.16 No 0 0 No -28 0.46 No 49 61.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131912018 + NM_005732 RAD50 0 . . . 2.37 70.62 12 4.8 No 76 -5.82 No 0 0 No -50 0.32 No 46 27.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75501841 - NM_001040108 MLH3 0 . . . 5.72 72.37 9 5.1 No 38 -4.43 No 0 0 No -23 0.41 No 42 78.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32972657 + NM_000059 BRCA2 0 . . . 0.23 74.69 13 4.36 No 7 0.4 No 0 0 No -48 0.86 Yes 47 68.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84380293 - NM_139076 FAM175A 0 . . . 9.23 94.37 38 7 Yes 60 0.21 No 0 0 No -37 0.83 Yes 36 38.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68349672 + NM_133509 RAD51B 0 . . . 1.89 75.18 22 4.8 No 33 1.16 Yes 0 0 No -21 0.44 No 25 57.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68710110 + NM_133509 RAD51B 0 . . . 4.73 70.89 16 6.56 Yes 1 0.8 Yes 0 0 No -24 0.42 No 51 57.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68834171 + NM_004360 CDH1 0 . . . 0.35 68.23 30 5.98 Yes 1 1.08 Yes 0 0 No -25 0.91 Yes 45 38.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152358775 - NM_005431 XRCC2 0 . . . 10.88 84.89 29 6.99 Yes 6 1.93 Yes 0 0 No -28 0.66 No 52 81.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68905209 + NM_133509 RAD51B 0 . . . 6.27 70.62 11 4.12 No -2 0.27 No 0 0 No -37 0.77 Yes 42 67.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6025450 - NM_000535 PMS2 0 . . . 0.32 74.68 29 5.54 No 38 0.3 No 0 0 No -28 0.85 Yes 54 62.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108111691 + NM_000051 ATM 0 . . . 2.72 72.44 40 6.18 Yes 35 1.17 Yes 0 0 No -23 0.69 Yes 48 68.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69126413 + NM_133509 RAD51B 0 . . . 5.63 77.9 30 7.42 Yes 39 -1.16 No 0 0 No -29 0.54 No 52 77.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69051912 + NM_133509 RAD51B 0 . . . 3.98 75.41 17 5.56 Yes -3 -2.2 No 0 0 No -16 0.64 No 45 85.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47801459 + NM_000251 MSH2 0 . . . 1.87 70.62 27 6.16 Yes 12 0.38 No 0 0 No -26 0.91 Yes 43 90.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190715795 + NM_000534 PMS1 0 . . . 2.34 74.42 22 4.77 No 24 1.02 Yes 0 0 No -21 0.45 No 34 87.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131929278 + NM_005732 RAD50 0 . . . 0.98 67.42 30 7.61 Yes 18 0.3 No 0 0 No -22 0.62 No 52 61.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68715489 + NM_133509 RAD51B 0 . . . 3.4 73.59 45 6.61 Yes 45 -1.93 No 0 0 No -23 0.63 No 39 41.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071364 + NM_133509 RAD51B 0 . . . 3.6 78.7 18 7 Yes 62 1.32 Yes 0 0 No -17 0.7 Yes 53 34.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68662069 + NM_133509 RAD51B 0 . . . 6.99 81.23 26 5.44 No 63 1.23 Yes 0 0 No -26 0.67 Yes 45 81.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215623338 - NM_000465 BARD1 0 . . . 6.61 81 27 5.66 Yes -1 0.5 No 0 0 No -25 0.73 Yes 44 84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108167626 + NM_000051 ATM 0 . . . 6.51 87.04 27 5.01 No 61 -4.19 No 0 0 No -19 0.42 No 48 67.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41273767 - NM_007294 BRCA1 0 . . . 5.53 79.08 23 5.35 No 23 1.06 Yes 0 0 No -25 0.7 Yes 35 42.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37054960 + NM_000249 MLH1 0 . . . 0.66 69.25 20 4.02 No 35 -3.25 No 0 0 No -19 0.91 Yes 55 45.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68648103 + NM_133509 RAD51B 0 . . . 4.1 79.66 15 5.46 No -1 0.99 Yes 0 0 No -28 0.56 No 55 60.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68314946 + NM_133509 RAD51B 0 . . . 1.41 73.95 20 4.63 No 33 1.03 Yes 0 0 No -22 0.73 Yes 21 45.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75506614 - NM_001040108 MLH3 0 . . . 5.78 88.76 22 5.1 No 41 0.33 No 0 0 No -21 0.82 Yes 43 78.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84388793 - NM_139076 FAM175A 0 . . . 1.51 67.26 19 5.57 Yes 72 0.38 No 0 0 No -18 0.59 No 43 90.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48021896 + NM_000179 MSH6 0 . . . 4.37 71.53 46 5.15 No 29 0.9 Yes 0 0 No -35 0.64 No 54 68.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215601773 - NM_000465 BARD1 0 . . . 4.25 76.05 22 4.71 No 34 0.65 No 0 0 No -22 0.42 No 49 30.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69021491 + NM_133509 RAD51B 0 . . . 5.15 73.92 35 6.43 Yes 39 0.95 Yes 0 0 No -34 0.8 Yes 26 48.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105179359 + NM_021930 RINT1 0 . . . 6.89 77.3 14 4.43 No 32 0.96 Yes 0 0 No -23 0.71 Yes 42 62.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215613863 - NM_000465 BARD1 0 . . . 5.58 82.85 23 5.36 No -1 0.51 No 0 0 No -22 0.57 No 50 62.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23632947 - NM_024675 PALB2 0 . . . 5.99 80.15 30 5.19 No 5 0.27 No 0 0 No -24 0.81 Yes 44 56.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68845170 + NM_133509 RAD51B 0 . . . 2.16 73.63 17 3.72 No 37 1.14 Yes 0 0 No -42 0.74 Yes 53 52.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94226959 - NM_005591 MRE11 0 . . . 5.09 74.92 16 4.24 No 65 -2.38 No 0 0 No -27 0.76 Yes 50 46.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6014177 - NM_000535 PMS2 0 . . . 6.09 71.86 11 4.12 No 29 0.79 Yes 0 0 No -29 0.88 Yes 47 76.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75510919 - NM_001040108 MLH3 0 . . . 0.38 0 31 6.73 Yes 29 0.85 Yes 0 0 No -31 0.6 No 29 70.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21992480 - NM_000077 CDKN2A 0 . . . 8.58 91.51 32 4.77 No 13 0.31 No 0 0 No -25 0.59 No 41 56.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68875429 + NM_133509 RAD51B 0 . . . 2.15 71.72 9 5 No 30 0.84 Yes 0 0 No -26 0.74 Yes 17 76.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89670761 + NM_000314 PTEN 0 . . . 1.38 75.23 29 5.66 Yes 59 0.34 No 0 0 No -28 0.52 No 48 91.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32950755 + NM_000059 BRCA2 0 . . . 1.06 0 17 5.48 No 33 0.5 No 0 0 No -16 0.66 Yes 18 74.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68982246 + NM_133509 RAD51B 0 . . . 2.69 68.34 35 6.4 Yes 30 -2.58 No 0 0 No -31 0.65 No 52 41.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131918123 + NM_005732 RAD50 0 . . . 2.77 67.64 12 5.98 Yes -2 0.82 Yes 0 0 No -23 0.61 No 38 69.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68820888 + NM_004360 CDH1 0 . . . 2.57 78.84 27 5.03 No 8 1.27 Yes 0 0 No -26 0.82 Yes 50 69.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68763207 + NM_133509 RAD51B 0 . . . 0.67 75.78 22 4.6 No 75 1.27 Yes 0 0 No -21 0.47 No 52 50.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68708922 + NM_133509 RAD51B 0 . . . 8.91 84.58 33 5.99 Yes 70 0.83 Yes 0 0 No -32 0.74 Yes 42 80.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59928505 - NM_032043 BRIP1 0 . . . 2.43 65.88 20 6 Yes 16 1.1 Yes 0 0 No -19 0.55 No 42 93.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47725169 + NM_000251 MSH2 0 . . . 5.02 83.87 13 4.99 No 4 0.82 Yes 0 0 No -24 0.46 No 39 30.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29094356 - NM_001005735 CHEK2 0 . . . 4.57 81.25 14 5.57 Yes 2 1.42 Yes 0 0 No -26 0.48 No 20 72.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47746731 + NM_000251 MSH2 0 . . . 2.9 82.48 16 4.69 No 38 0.16 No 0 0 No -41 0.62 No 21 32.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59774178 - NM_032043 BRIP1 0 . . . 1.88 74.22 27 7.59 Yes 76 1.15 Yes 0 0 No -26 0.4 No 50 79.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41210010 - NM_007294 BRCA1 0 . . . 4.15 84 28 5.31 No 52 1.1 Yes 0 0 No -28 0.83 Yes 14 75.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47713341 + NM_000251 MSH2 0 . . . 1.65 68.94 19 6.39 Yes -2 0.15 No 0 0 No -28 0.61 No 44 69.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104163319 - NM_001100119 XRCC3 0 . . . 5.43 71 41 5.99 Yes 75 -4.85 No 0 0 No -29 0.49 No 19 33.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108126173 + NM_000051 ATM 0 . . . 4.74 84.41 26 5.24 No 15 1.68 Yes 0 0 No -25 0.63 No 43 85.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108238102 + NM_000051 ATM 0 . . . 5.1 82.99 28 5.57 Yes 75 1.09 Yes 0 0 No -27 0.91 Yes 42 87.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56810263 + NM_058216 RAD51C 0 . . . 2.13 0 21 4.81 No 31 1.58 Yes 0 0 No -30 0.35 No 27 93.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68871196 + NM_004360 CDH1 0 . . . 3.5 73.1 24 4.73 No 37 0.44 No 0 0 No -24 0.76 Yes 21 94.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84393666 - NM_139076 FAM175A 0 . . . 3.75 76.55 26 4.13 No 59 0.66 No 0 0 No -25 0.47 No 47 52.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29136926 - NM_001005735 CHEK2 0 . . . 5.84 82.31 39 6.12 Yes 9 0.96 Yes 0 0 No -25 0.78 Yes 49 85.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94217683 - NM_005591 MRE11 0 . . . 1.35 79.98 20 4.23 No 8 0.8 Yes 0 0 No -19 0.9 Yes 50 60.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89637744 + NM_000314 PTEN 0 . . . 3.1 75.22 63 6.18 Yes 5 0.05 No 0 0 No -30 0.53 No 46 27.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32952434 + NM_000059 BRCA2 0 . . . 4.5 78.25 13 4.43 No 30 0.81 Yes 0 0 No -24 0.51 No 43 76.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68465515 + NM_133509 RAD51B 0 . . . 5.95 70.32 12 4.93 No 25 0.4 No 0 0 No -14 0.22 No 29 90.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45807524 - NM_001048171 MUTYH 0 . . . 0.63 75.53 24 4.97 No 58 -5.67 No 0 0 No -24 0.6 No 39 67.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131927658 + NM_005732 RAD50 0 . . . 1.78 55.24 27 5.2 No 24 1.38 Yes 0 0 No -26 0.65 No 39 59.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68402102 + NM_133509 RAD51B 0 . . . 5.91 0 19 4.69 No 74 -3.64 No 0 0 No -18 0.73 Yes 51 70.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47778678 + NM_000251 MSH2 0 . . . 0.72 66.95 24 5.39 No 53 0.22 No 0 0 No -20 0.4 No 30 92.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68576310 + NM_133509 RAD51B 0 . . . 1.36 75.46 18 4.69 No 40 -0.94 No 0 0 No -17 0.38 No 52 37.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6010805 - NM_000535 PMS2 0 . . . 0.15 63.6 25 4.96 No 17 -2.9 No 0 0 No -24 0.83 Yes 41 28.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68868185 + NM_004360 CDH1 0 . . . 5.91 76.87 35 6.39 Yes 43 -0.64 No 0 0 No -34 0.79 Yes 50 57.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68797335 + NM_133509 RAD51B 0 . . . 4.49 86.11 27 5.46 No 43 -2.06 No 0 0 No -48 0.49 No 52 73.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68584618 + NM_133509 RAD51B 0 . . . 2.59 64.67 24 4.89 No 56 -2.13 No 0 0 No -23 0.44 No 44 48.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152372644 - NM_005431 XRCC2 0 . . . 8.82 79.56 43 6.23 Yes 19 1.68 Yes 0 0 No -42 0.43 No 49 66.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131932649 + NM_005732 RAD50 0 . . . 1.45 69.29 17 4.8 No 64 -4.9 No 0 0 No -16 0.39 No 42 33.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68669719 + NM_133509 RAD51B 0 . . . 0.92 76.69 20 4.52 No 37 1.73 Yes 0 0 No -25 0.43 No 21 81.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89677930 + NM_000314 PTEN 0 . . . 3.21 80.12 41 8.07 Yes 7 1.18 Yes 0 0 No -40 0.94 Yes 51 85.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68850236 + NM_004360 CDH1 0 . . . 1.86 71.79 22 6.67 Yes 75 1.54 Yes 0 0 No -21 0.47 No 44 59.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152357491 - NM_005431 XRCC2 0 . . . 6.22 84.52 24 5.24 No 66 1.73 Yes 0 0 No -32 0.66 No 47 59.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68912366 + NM_133509 RAD51B 0 . . . 4.72 77.47 21 4.49 No 5 1.39 Yes 0 0 No -26 0.87 Yes 40 84.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90953200 - NM_002485 NBN 0 . . . 1.52 71.93 34 5.62 Yes 16 0.85 Yes 0 0 No -24 0.52 No 51 82.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94224548 - NM_005591 MRE11 0 . . . 2.39 71.72 19 4.7 No 67 -6.63 No 0 0 No -40 0.79 Yes 48 66.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47715846 + NM_000251 MSH2 0 . . . 9.02 88.62 16 5.57 Yes 37 0.9 Yes 0 0 No -24 0.94 Yes 37 66.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105181471 + NM_021930 RINT1 0 . . . 5.01 80.64 22 5 No 15 1.29 Yes 0 0 No -21 0.67 Yes 43 89.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94179407 - NM_005591 MRE11 0 . . . 1.96 80.12 16 5.23 No 7 0.42 No 0 0 No -27 0.34 No 41 82.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69076209 + NM_133509 RAD51B 0 . . . 0.79 0 16 5.1 No 19 1.64 Yes 0 0 No -19 0.57 No 39 89.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37060139 + NM_000249 MLH1 0 . . . 4.71 84.17 15 4.47 No 38 0.38 No 0 0 No -42 0.63 No 44 43.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94179166 - NM_005591 MRE11 0 . . . 8.21 88.3 41 6.36 Yes 75 -2.87 No 0 0 No -28 0.57 No 46 94.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21976690 - NM_000077 CDKN2A 0 . . . 8.58 92.53 16 4.69 No 60 1.25 Yes 0 0 No -23 0.66 No 49 31.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69139737 + NM_133509 RAD51B 0 . . . 5.16 80.72 24 5.19 No 57 -0.87 No 0 0 No -23 0.86 Yes 45 46.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94182318 - NM_005591 MRE11 0 . . . 5.11 77.04 13 4.36 No 4 0.95 Yes 0 0 No -35 0.68 Yes 36 74.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89709243 + NM_000314 PTEN 0 . . . 6.56 76.24 25 5.07 No 17 -2.57 No 0 0 No -24 0.93 Yes 42 92.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41255383 - NM_007294 BRCA1 0 . . . 1.41 84.22 24 6.02 Yes 33 0.98 Yes 0 0 No -23 0.37 No 50 50.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56810739 + NM_058216 RAD51C 0 . . . 2.35 68.52 22 4.58 No 2 0.72 No 0 0 No -24 0.53 No 50 69.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68823187 + NM_004360 CDH1 0 . . . 0.44 80.02 31 6.08 Yes 3 0.76 No 0 0 No -37 0.4 No 50 86.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68883023 + NM_133509 RAD51B 0 . . . 0.48 77.45 62 6.33 Yes 51 0.98 Yes 0 0 No -22 0.77 Yes 51 33.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108135821 + NM_000051 ATM 0 . . . 1.69 67.45 20 5.1 No 6 0.05 No 0 0 No -19 0.54 No 44 85.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6036109 - NM_000535 PMS2 0 . . . 6.14 88.68 22 6.11 Yes 26 1.17 Yes 0 0 No -21 0.87 Yes 32 84.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33447976 - NM_002878 RAD51D 0 . . . 7.55 86.22 28 7.68 Yes 2 0.34 No 0 0 No -27 0.93 Yes 49 55.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41194992 - NM_007294 BRCA1 0 . . . 4.87 80.49 20 5.3 No 41 1.21 Yes 0 0 No -26 0.92 Yes 50 73.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68575561 + NM_133509 RAD51B 0 . . . 4.61 68.99 19 4.96 No 39 0.04 No 0 0 No -25 0.74 Yes 44 70.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190710235 + NM_000534 PMS1 0 . . . 2.54 72.16 61 7.78 Yes 60 0.22 No 0 0 No -56 0.37 No 43 86.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131925335 + NM_005732 RAD50 0 . . . 3.18 76.08 9 5.83 Yes 28 1.26 Yes 0 0 No -27 0.53 No 30 60 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131948644 + NM_005732 RAD50 0 . . . 6.66 75.81 24 4.66 No 2 1.17 Yes 0 0 No -23 0.72 Yes 46 89.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68299645 + NM_133509 RAD51B 0 . . . 3 86.34 9 3.87 No 27 0.24 No 0 0 No -27 0.96 Yes 48 42.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108168968 + NM_000051 ATM 0 . . . 7.49 79.22 20 4.94 No 9 0.83 Yes 0 0 No -23 0.74 Yes 49 55.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29127394 - NM_001005735 CHEK2 0 . . . 1.89 76.76 18 5.65 Yes 34 0.86 Yes 0 0 No -25 0.73 Yes 42 48.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68641889 + NM_133509 RAD51B 0 . . . 3.83 77.87 21 4.99 No 39 1.66 Yes 0 0 No -20 0.76 Yes 26 39.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68813155 + NM_004360 CDH1 0 . . . 1.47 69.15 13 4.36 No 76 0.74 No 0 0 No -27 0.45 No 48 25.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68295299 + NM_133509 RAD51B 0 . . . 3.09 66.38 15 4.87 No 29 0.55 No 0 0 No -54 0.89 Yes 26 91.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59838338 - NM_032043 BRIP1 0 . . . 6.28 84.97 18 4.84 No 51 0.78 Yes 0 0 No -23 0.61 No 43 84.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68292628 + NM_133509 RAD51B 0 . . . 3.11 78.6 18 3.79 No 71 0.04 No 0 0 No -21 0.34 No 41 62.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68955271 + NM_133509 RAD51B 0 . . . 3.37 73.15 28 5.19 No 2 0.71 No 0 0 No -27 0.83 Yes 48 72.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68565995 + NM_133509 RAD51B 0 . . . 1.48 76.24 15 5.38 No -4 0.09 No 0 0 No -30 0.88 Yes 42 62.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68782447 + NM_133509 RAD51B 0 . . . 1.63 72.33 31 5.62 Yes 31 1.22 Yes 0 0 No -30 0.73 Yes 27 81.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68613522 + NM_133509 RAD51B 0 . . . 0.06 0 12 3.39 No 7 0.08 No 0 0 No -16 0.64 No 38 91.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108156359 + NM_000051 ATM 0 . . . 2.39 0 32 6.84 Yes 75 -4.36 No 0 0 No -31 0.85 Yes 40 91.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68893028 + NM_133509 RAD51B 0 . . . 6.76 80.23 33 6.18 Yes 65 1.38 Yes 0 0 No -32 0.52 No 43 58.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131974741 + NM_005732 RAD50 0 . . . 1.42 0 26 5.32 No 9 1.82 Yes 0 0 No -28 0.83 Yes 39 92.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68446583 + NM_133509 RAD51B 0 . . . 1.26 65.04 40 5.48 No 55 0.86 Yes 0 0 No -29 0.43 No 43 66.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68605919 + NM_133509 RAD51B 0 . . . 2.52 74.26 20 3.97 No 67 0.19 No 0 0 No -23 0.29 No 27 45.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108190213 + NM_000051 ATM 0 . . . 3.48 81.83 33 6.51 Yes 0 0.02 No 0 0 No -37 0.8 Yes 51 45.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29091139 - NM_001005735 CHEK2 0 . . . 1 76.13 15 3.74 No 54 -2.12 No 0 0 No -24 0.66 Yes 43 63.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190708829 + NM_000534 PMS1 0 . . . 1.72 65.57 24 5.71 Yes 75 -6.05 No 0 0 No -23 0.55 No 45 79.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89631107 + NM_000314 PTEN 0 . . . 8.91 85.96 30 5.38 No 14 1.32 Yes 0 0 No -22 0.37 No 44 81.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47754486 + NM_000251 MSH2 0 . . . 1.87 75.6 18 4.69 No 40 1.35 Yes 0 0 No -17 0.94 Yes 18 66.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68352545 + NM_133509 RAD51B 0 . . . 0.51 66.29 56 7.68 Yes 65 0.49 No 35 0.77 Yes -28 0.55 No 50 54.17 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68469708 + NM_133509 RAD51B 0 . . . 8.96 88.26 16 4.47 No 17 1.33 Yes 0 0 No -15 0.81 Yes 49 75.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6030545 - NM_000535 PMS2 0 . . . 1.17 83.16 57 8.22 Yes 27 1.77 Yes 0 0 No -33 0.49 No 45 48.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68468950 + NM_133509 RAD51B 0 . . . 4.3 77.18 9 3.87 No 75 0.98 Yes 0 0 No -29 0.45 No 38 71.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89654800 + NM_000314 PTEN 0 . . . 5.52 74.65 15 5.57 Yes 75 -5.56 No 0 0 No -51 0.48 No 50 73.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90975611 - NM_002485 NBN 0 . . . 2.4 83.53 36 5.98 Yes 75 0.99 Yes 0 0 No -30 0.57 No 29 82.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89726991 + NM_000314 PTEN 0 . . . 3.79 65.97 24 5.48 No 2 0.92 Yes 0 0 No -23 0.88 Yes 46 83.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7588897 - NM_000546 TP53 0 . . . 0.42 74.68 14 3.61 No 51 0.73 No 0 0 No -27 0.42 No 39 55.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68492601 + NM_133509 RAD51B 0 . . . 6.48 80.34 31 6.08 Yes 76 0.92 Yes 0 0 No -31 0.54 No 47 91.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89633463 + NM_000314 PTEN 0 . . . 8.28 89.41 25 5.15 No 68 -4.03 No 0 0 No -24 0.58 No 44 43.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89685110 + NM_000314 PTEN 0 . . . 5.65 71.86 11 5 No 14 0.69 No 0 0 No -43 0.46 No 46 59.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29091991 - NM_001005735 CHEK2 0 . . . 5.09 81.09 19 4.5 No 44 -5.02 No 0 0 No -22 0.9 Yes 45 49.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68315182 + NM_133509 RAD51B 0 . . . 1.09 81.34 23 3.75 No 46 1.97 Yes 0 0 No -51 0.69 Yes 40 82.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47736772 + NM_000251 MSH2 0 . . . 2.28 0 33 5.92 Yes 9 0.32 No 0 0 No -32 0.94 Yes 49 65.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89670205 + NM_000314 PTEN 0 . . . 3.36 0 23 5.39 No 66 1.37 Yes 0 0 No -22 0.63 No 42 66.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69043644 + NM_133509 RAD51B 0 . . . 10.34 85.26 18 5.65 Yes 4 0.05 No 0 0 No -17 0.52 No 49 43.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108172089 + NM_000051 ATM 0 . . . 4.26 72.11 21 6.24 Yes 64 -4.64 No 0 0 No -25 0.72 Yes 43 49.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215651878 - NM_000465 BARD1 0 . . . 4.17 74.74 22 5.61 Yes 24 0.64 No 0 0 No -35 0.58 No 45 48.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215658912 - NM_000465 BARD1 0 . . . 1.83 76.09 26 5.2 No 38 1.45 Yes 0 0 No -29 0.63 No 44 65.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68471679 + NM_133509 RAD51B 0 . . . 7.32 85.65 22 5.1 No 6 0.42 No 0 0 No -21 0.72 Yes 52 56.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215647006 - NM_000465 BARD1 0 . . . 0.99 64.63 12 5.48 No 50 1.24 Yes 0 0 No -48 0.34 No 41 53.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89672225 + NM_000314 PTEN 0 . . . 7.75 79.14 18 4.8 No 22 1.09 Yes 0 0 No -41 0.65 No 29 60.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190720079 + NM_000534 PMS1 0 . . . 7.41 83.21 14 4.12 No 64 1.81 Yes 0 0 No -13 0.56 No 47 68.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108155897 + NM_000051 ATM 0 . . . 0.42 74.73 25 5.56 Yes 33 1.01 Yes 0 0 No -24 0.76 Yes 20 41.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47689311 + NM_000251 MSH2 0 . . . 1.4 84.22 30 5.92 Yes 33 0.7 No 0 0 No -23 0.5 No 50 57.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1216327 + NM_000455 STK11 0 . . . 3.17 66.18 22 5 No 34 1.23 Yes 0 0 No -21 0.53 No 44 80.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152371384 - NM_005431 XRCC2 0 . . . 2.1 80.47 29 7.72 Yes 4 0.11 No 0 0 No -28 0.47 No 43 87.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215645150 - NM_000465 BARD1 0 . . . 4.46 79.85 13 5.92 Yes 22 0.41 No 0 0 No -28 0.92 Yes 43 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152365647 - NM_005431 XRCC2 0 . . . 3.22 72.57 38 6.4 Yes 33 1.36 Yes 0 0 No -24 0.59 No 43 63.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68299625 + NM_133509 RAD51B 0 . . . 3.87 79.77 20 4.79 No 7 0.25 No 0 0 No -24 0.74 Yes 40 46.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131925241 + NM_005732 RAD50 0 . . . 9.06 89.97 31 6.38 Yes 56 1.09 Yes 0 0 No -33 0.44 No 44 73.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68869137 + NM_133509 RAD51B 0 . . . 1.05 0 46 4.69 No 65 0.93 Yes 0 0 No -28 0.42 No 50 20.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108182124 + NM_000051 ATM 0 . . . 3.58 0 18 4.38 No 4 1.1 Yes 0 0 No -19 0.6 No 46 50.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23648562 - NM_024675 PALB2 0 . . . 1.77 0 17 4.8 No 0 -2.05 No 0 0 No -22 0.47 No 31 44.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215660816 - NM_000465 BARD1 0 . . . 6.27 85.56 36 5.94 Yes 7 0.87 Yes 0 0 No -35 0.78 Yes 51 69.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47686787 + NM_000251 MSH2 0 . . . 4.91 81.49 20 5.38 No 49 0.53 No 0 0 No -19 0.66 Yes 44 51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33430020 - NM_002878 RAD51D 0 . . . 1.09 71.53 23 5.2 No 76 0.03 No 0 0 No -22 0.64 No 49 56.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89694417 + NM_000314 PTEN 0 . . . 2.98 71.49 22 5.29 No 44 0.46 No 0 0 No -24 0.55 No 35 46.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68465796 + NM_133509 RAD51B 0 . . . 7.61 76.45 26 5 No 45 1.35 Yes 0 0 No -25 0.9 Yes 49 67.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47752184 + NM_000251 MSH2 0 . . . 0.86 73.37 23 4.99 No 66 -3.6 No 0 0 No -22 0.82 Yes 52 30.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108226252 + NM_000051 ATM 0 . . . 1.26 62.21 15 3.49 No 2 0.03 No 0 0 No -22 0.3 No 43 51.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68667261 + NM_133509 RAD51B 0 . . . 4.84 82.19 15 5.92 Yes 3 0.52 No 0 0 No -21 0.61 No 38 48.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108105073 + NM_000051 ATM 0 . . . 5.13 79.29 24 5.76 Yes 33 1.08 Yes 0 0 No -23 0.56 No 46 96.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47775624 + NM_000251 MSH2 0 . . . 5.85 83.39 25 5.27 No 67 1.18 Yes 0 0 No -24 0.55 No 44 80.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89714693 + NM_000314 PTEN 0 . . . 2.69 69.27 28 5.11 No 21 -2.49 No 0 0 No -27 0.43 No 44 44.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94207473 - NM_005591 MRE11 0 . . . 3.75 80.39 37 7.58 Yes 51 1.02 Yes 0 0 No -36 0.72 Yes 47 68.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90967664 - NM_002485 NBN 0 . . . 0.13 64.08 22 4.05 No -2 0.2 No 0 0 No -22 0.69 Yes 60 45.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190676778 + NM_000534 PMS1 0 . . . 0.09 74.68 18 6 Yes 53 1.02 Yes 0 0 No -54 0.61 No 54 74.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68860791 + NM_004360 CDH1 0 . . . 3.03 73.38 23 5.77 Yes 70 0.36 No 0 0 No -23 0.54 No 50 66.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37043149 + NM_000249 MLH1 0 . . . 0.11 69.52 22 5.97 Yes 59 -3.37 No 0 0 No -26 0.69 Yes 40 41.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89731966 + NM_000314 PTEN 0 . . . 4.77 74.32 30 5.57 Yes 13 0.65 No 0 0 No -28 0.75 Yes 45 73.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84389238 - NM_139076 FAM175A 0 . . . 6.53 80.23 17 6.93 Yes 60 1.22 Yes 0 0 No -29 0.64 No 54 62.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68853129 + NM_004360 CDH1 0 . . . 0.44 0 55 7.67 Yes 45 -4.21 No 0 0 No -20 0.51 No 46 37.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94184938 - NM_005591 MRE11 0 . . . 2.37 79.65 25 5.47 No 16 0.59 No 0 0 No -24 0.38 No 42 49.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215634116 - NM_000465 BARD1 0 . . . 2.55 76.31 21 6.02 Yes 54 0.77 Yes 0 0 No -20 0.81 Yes 49 67.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68712065 + NM_133509 RAD51B 0 . . . 0.38 66.78 19 4.9 No -3 0.18 No 0 0 No -18 0.7 Yes 49 87.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68539886 + NM_133509 RAD51B 0 . . . 1.86 75.9 21 6.43 Yes 7 0.01 No 0 0 No -20 0.9 Yes 43 57.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190715201 + NM_000534 PMS1 0 . . . 2.94 86.64 24 6.95 Yes 32 -2.06 No 0 0 No -23 0.84 Yes 48 73.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68671511 + NM_133509 RAD51B 0 . . . 5.69 71.73 21 4.79 No 47 -2.3 No 0 0 No -20 0.89 Yes 41 58.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68643580 + NM_133509 RAD51B 0 . . . 4.92 77.56 39 7.28 Yes 68 -4.97 No 0 0 No -38 0.86 Yes 43 97.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21981305 - NM_000077 CDKN2A 0 . . . 3.93 79.95 34 6.96 Yes 34 1 Yes 0 0 No -33 0.7 Yes 43 58.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68583936 + NM_133509 RAD51B 0 . . . 4.22 71.56 37 6.36 Yes 11 0.83 Yes 0 0 No -33 0.6 No 47 58.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6044659 - NM_000535 PMS2 0 . . . 1.24 0 42 5.27 No 73 1.11 Yes 0 0 No -31 0.52 No 55 51.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68792310 + NM_133509 RAD51B 0 . . . 5.78 83.21 20 6.89 Yes 52 1.25 Yes 0 0 No -27 0.84 Yes 38 61.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59757157 - NM_032043 BRIP1 0 . . . 1.14 71.72 16 6 Yes 3 0.73 No 0 0 No -24 0.41 No 45 49.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215662815 - NM_000465 BARD1 0 . . . 1.76 77.95 23 6.56 Yes 50 0.88 Yes 0 0 No -22 0.84 Yes 47 46.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84405120 - NM_139076 FAM175A 0 . . . 8.11 76.13 31 6.9 Yes 62 0.23 No 0 0 No -31 0.78 Yes 29 78.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68423350 + NM_133509 RAD51B 0 . . . 2.01 79.59 29 5.45 No 25 -2.58 No 0 0 No -28 0.88 Yes 45 93.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94227525 - NM_005591 MRE11 0 . . . 3.56 84.21 27 5.1 No 41 0.47 No 0 0 No -26 0.87 Yes 32 47.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37049843 + NM_000249 MLH1 0 . . . 0.42 74.73 23 4.88 No 33 1.16 Yes 0 0 No -54 0.65 No 14 47.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215638567 - NM_000465 BARD1 0 . . . 2.83 76.55 9 3.87 No 19 -2.38 No 0 0 No -28 0.6 No 46 40.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41260102 - NM_007294 BRCA1 0 . . . 0.02 80.49 17 4.8 No 16 1.14 Yes 0 0 No -22 0.58 No 33 55.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89669765 + NM_000314 PTEN 0 . . . 7.74 86.33 17 4.8 No 31 0.46 No 0 0 No -37 0.46 No 27 70.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89684975 + NM_000314 PTEN 0 . . . 4.39 78.86 28 5.38 No 22 1.92 Yes 0 0 No -27 0.35 No 46 59.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68628659 + NM_133509 RAD51B 0 . . . 2.79 69.15 16 3.94 No 28 0.28 No 0 0 No -25 0.35 No 42 57.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68773206 + NM_004360 CDH1 0 . . . 2.25 67.3 43 6.42 Yes 57 0.63 No 0 0 No -42 0.57 No 37 49.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21992833 - NM_000077 CDKN2A 0 . . . 7.76 91.42 33 7.14 Yes 19 0.54 No 0 0 No -32 0.83 Yes 39 75.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68948625 + NM_133509 RAD51B 0 . . . 3.87 78.49 25 5.12 No 6 0.68 No 0 0 No -22 0.65 No 44 64.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68732146 + NM_133509 RAD51B 0 . . . 0.34 0 31 5.83 Yes 75 0.15 No 0 0 No -27 0.58 No 35 47.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23629944 - NM_024675 PALB2 0 . . . 2.03 61.81 21 5.44 No 28 0.94 Yes 0 0 No -33 0.51 No 23 39.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68501249 + NM_133509 RAD51B 0 . . . 2.17 70.85 16 4.69 No 55 1.45 Yes 0 0 No -37 0.5 No 40 74.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69068277 + NM_133509 RAD51B 0 . . . 3.82 81.9 26 5.66 Yes -4 1.33 Yes 0 0 No -25 0.82 Yes 44 37.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45796590 - NM_001048171 MUTYH 0 . . . 2.24 80.12 29 5.56 Yes 7 1.16 Yes 0 0 No -28 0.78 Yes 51 81.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108120060 + NM_000051 ATM 0 . . . 3.82 73.98 16 4.61 No 45 1.02 Yes 0 0 No -18 0.36 No 49 69.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215603810 - NM_000465 BARD1 0 . . . 0.15 0 11 5.1 No 61 1.07 Yes 0 0 No -24 0.28 No 53 53.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59911410 - NM_032043 BRIP1 0 . . . 1.58 70.99 25 5.04 No 68 1.04 Yes 0 0 No -24 0.62 No 42 86.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68538741 + NM_133509 RAD51B 0 . . . 8.21 84.47 25 5.01 No 3 0.41 No 0 0 No -51 0.4 No 47 52.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131960188 + NM_005732 RAD50 0 . . . 4.47 73.83 25 4.88 No 65 1.08 Yes 0 0 No -24 0.78 Yes 45 63.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69008044 + NM_133509 RAD51B 0 . . . 1.28 80.69 47 7.99 Yes 44 0.73 No 0 0 No -33 0.49 No 50 82.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41196557 - NM_007294 BRCA1 0 . . . 1.91 85.37 23 6.4 Yes 41 -2.22 No 0 0 No -22 0.84 Yes 46 44.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41241029 - NM_007294 BRCA1 0 . . . 7.29 87.82 52 9.15 Yes 2 1.12 Yes 0 0 No -51 0.37 No 48 44.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41011206 + NM_001164269 RAD51 0 . . . 2.08 65.71 22 5.1 No 4 1.35 Yes 0 0 No -21 0.92 Yes 53 39.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90975402 - NM_002485 NBN 0 . . . 2.34 70.02 39 6.21 Yes -4 0.57 No 0 0 No -38 0.53 No 54 31.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94196665 - NM_005591 MRE11 0 . . . 4.72 64.76 28 5.74 Yes 47 0.34 No 0 0 No -27 0.53 No 48 65.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68825690 + NM_133509 RAD51B 0 . . . 5.94 80.72 22 4.63 No 53 0.61 No 0 0 No -21 0.46 No 45 39.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68805001 + NM_133509 RAD51B 0 . . . 0.06 0 19 4.8 No 60 -3.57 No 0 0 No -18 0.9 Yes 44 60.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68369962 + NM_133509 RAD51B 0 . . . 3.81 85.81 21 5.16 No 62 0.91 Yes 0 0 No -23 0.47 No 47 92.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47655461 + NM_000251 MSH2 0 . . . 0.38 76.63 41 6.36 Yes 67 -4.95 No 0 0 No -25 0.66 No 43 52.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68840099 + NM_004360 CDH1 0 . . . 7.03 92 19 4.92 No 71 1.08 Yes 0 0 No -16 0.34 No 44 62.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90982172 - NM_002485 NBN 0 . . . 3.69 0 29 5.44 No 72 0.87 Yes 0 0 No -28 0.61 No 44 53.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32916819 + NM_000059 BRCA2 0 . . . 6.03 73.73 35 8.69 Yes 41 -1.95 No 0 0 No -34 0.42 No 39 63.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68947573 + NM_133509 RAD51B 0 . . . 3.85 76.68 21 6.14 Yes 52 0.83 Yes 0 0 No -20 0.75 Yes 50 59.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89632623 + NM_000314 PTEN 0 . . . 0.2 64.24 18 4.9 No 57 0.67 No 0 0 No -23 0.38 No 37 70.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68864712 + NM_133509 RAD51B 0 . . . 6.59 86.99 16 5.91 Yes -1 0.54 No 0 0 No -26 0.5 No 48 38.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68905470 + NM_133509 RAD51B 0 . . . 1.47 79.63 25 5.09 No 30 -2.51 No 0 0 No -24 0.48 No 53 64.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131892878 + NM_005732 RAD50 0 . . . 1.33 77.71 9 5.38 No NA NA NA 0 0 No -22 0.65 No 21 60.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94218185 - NM_005591 MRE11 0 . . . 1.89 75.18 24 5.93 Yes 19 -3.36 No 0 0 No -27 0.49 No 13 47.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152360637 - NM_005431 XRCC2 0 . . . 3.13 65.39 25 6.08 Yes 59 0.5 No 0 0 No -35 0.41 No 48 39.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68348198 + NM_133509 RAD51B 0 . . . 1.71 0 21 4.58 No 16 0.34 No 0 0 No -20 0.7 Yes 42 91.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68288245 + NM_133509 RAD51B 0 . . . 0.37 69.19 29 5.39 No 28 0.86 Yes 0 0 No -28 0.84 Yes 54 48.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7591784 - NM_000546 TP53 0 . . . 2.09 72.76 21 4.9 No 7 -0.11 No 0 0 No -20 0.59 No 51 32.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152352194 - NM_005431 XRCC2 0 . . . 1.36 65.72 26 7 Yes 76 0.5 No 0 0 No -25 0.87 Yes 36 76.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69151431 + NM_133509 RAD51B 0 . . . 7.27 86.37 22 4.69 No 53 0.62 No 0 0 No -21 0.8 Yes 50 38.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37036672 + NM_000249 MLH1 0 . . . 7.74 90.1 17 4.32 No 44 -3.31 No 0 0 No -39 0.55 No 39 73.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29108934 - NM_001005735 CHEK2 0 . . . 8.42 85.22 27 4.83 No 63 -5.62 No 0 0 No -26 0.59 No 50 82.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108146094 + NM_000051 ATM 0 . . . 6.32 79.64 27 3.85 No 63 1.58 Yes 0 0 No -20 0.6 No 52 37.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68519382 + NM_133509 RAD51B 0 . . . 2.93 84.79 24 5.59 Yes 45 1.74 Yes 0 0 No -28 0.79 Yes 13 73.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69101223 + NM_133509 RAD51B 0 . . . 8.45 70.92 29 5.95 Yes 23 0.67 No 0 0 No -24 0.92 Yes 35 85.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94159943 - NM_005591 MRE11 0 . . . 5.88 61.74 21 5.65 Yes 73 0.63 No 0 0 No -20 0.58 No 48 47.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6044154 - NM_000535 PMS2 0 . . . 2 80.34 49 7.34 Yes 32 1.13 Yes 0 0 No -23 0.5 No 16 33.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69139691 + NM_133509 RAD51B 0 . . . 4.86 79.17 13 4.81 No 57 -2.61 No 0 0 No -25 0.27 No 48 86.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68298236 + NM_133509 RAD51B 0 . . . 3.05 76.62 16 5.92 Yes 11 -0.91 No 0 0 No -28 0.72 Yes 43 87.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108122224 + NM_000051 ATM 0 . . . 1.7 64.31 18 6.78 Yes 42 0.28 No 0 0 No -17 0.68 Yes 49 30.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41218382 - NM_007294 BRCA1 0 . . . 1.1 61.79 51 5.55 No -4 0.53 No 0 0 No -42 0.6 No 62 42.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640219 + NM_000251 MSH2 0 . . . 2.67 67.37 40 5.75 Yes 27 0.31 No 0 0 No -25 0.62 No 44 72.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68504610 + NM_133509 RAD51B 0 . . . 4.75 65.85 24 4.8 No 28 0.71 No 0 0 No -41 0.73 Yes 44 92.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68640345 + NM_133509 RAD51B 0 . . . 6.43 73.27 15 5.53 No 21 0.57 No 0 0 No -30 0.52 No 37 56.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68476781 + NM_133509 RAD51B 0 . . . 10.69 90.88 29 4.47 No 48 1.22 Yes 0 0 No -28 0.77 Yes 47 88.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33429426 - NM_002878 RAD51D 0 . . . 1.28 71.56 16 4.1 No 69 0.89 Yes 0 0 No -50 0.56 No 54 36.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108154510 + NM_000051 ATM 0 . . . 5.14 84.1 21 3.78 No 60 -3 No 0 0 No -20 0.85 Yes 42 45.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29090020 - NM_001005735 CHEK2 0 . . . 3.51 78.67 20 5 No 76 -6.5 No 0 0 No -25 0.27 No 51 39.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6009285 - NM_000535 PMS2 0 . . . 2.67 73.85 40 5.49 No 31 -4.17 No 0 0 No -26 0.56 No 45 53.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68783928 + NM_133509 RAD51B 0 . . . 0.19 0 24 5.1 No 24 -2.85 No 0 0 No -23 0.72 Yes 56 26.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40988925 + NM_001164269 RAD51 0 . . . 1.54 66.42 14 5.39 No 27 1.39 Yes 0 0 No -13 0.41 No 31 90.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89681236 + NM_000314 PTEN 0 . . . 2.71 78.28 12 3.85 No 33 1.16 Yes 0 0 No -20 0.88 Yes 25 68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6011560 - NM_000535 PMS2 0 . . . 1.73 83.16 19 4.43 No 33 0.98 Yes 0 0 No -18 0.74 Yes 50 66.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75492865 - NM_001040108 MLH3 0 . . . 0.21 58.49 17 3.69 No 5 -2.45 No 0 0 No -22 0.54 No 53 41.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7570697 - NM_000546 TP53 0 . . . 5.62 82.92 43 5 No 73 2.02 Yes 0 0 No -21 0.42 No 53 41.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68694931 + NM_133509 RAD51B 0 . . . 1.77 72.91 22 5.55 No 9 1.33 Yes 0 0 No -21 0.66 No 43 76.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47656306 + NM_000251 MSH2 0 . . . 1.27 68.84 29 7.34 Yes 52 0.03 No 0 0 No -28 0.84 Yes 48 71.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68529742 + NM_133509 RAD51B 0 . . . 1 77.77 14 5.3 No 75 1.24 Yes 0 0 No -23 0.41 No 43 61.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68444752 + NM_133509 RAD51B 0 . . . 3.33 76.84 17 4.8 No 69 0.2 No 0 0 No -25 0.59 No 49 47.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41004308 + NM_001164269 RAD51 0 . . . 2.43 0 21 7.19 Yes 21 -1.17 No 0 0 No -20 0.64 No 37 47.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131900605 + NM_005732 RAD50 0 . . . 2.34 71.48 28 4.78 No 61 0.28 No 0 0 No -21 0.43 No 44 59.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190669557 + NM_000534 PMS1 0 . . . 2.98 78.01 15 4.58 No 21 0.2 No 0 0 No -21 0.51 No 37 57.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69117535 + NM_133509 RAD51B 0 . . . 6.82 86.38 21 5.89 Yes 54 0.46 No 0 0 No -23 0.52 No 41 74.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68398000 + NM_133509 RAD51B 0 . . . 7.38 76.45 28 5.38 No 13 1.06 Yes 0 0 No -27 0.58 No 45 91.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69081378 + NM_133509 RAD51B 0 . . . 0.22 0 32 5.74 Yes 32 1.58 Yes 0 0 No -48 0.44 No 26 51.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41234351 - NM_007294 BRCA1 0 . . . 6.63 77.67 35 7.57 Yes 34 0.96 Yes 0 0 No -29 0.83 Yes 31 89.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69124805 + NM_133509 RAD51B 0 . . . 0.72 66.31 38 4.76 No 54 0.97 Yes 0 0 No -14 0.5 No 43 67.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68805701 + NM_133509 RAD51B 0 . . . 4.09 76.41 12 4.8 No 67 -2.04 No 0 0 No -16 0.38 No 43 78.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68433620 + NM_133509 RAD51B 0 . . . 8.43 78.66 26 5.06 No 8 1.66 Yes 0 0 No -25 0.63 No 45 57.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68679394 + NM_133509 RAD51B 0 . . . 4.91 78.05 22 3.89 No 74 0.39 No 0 0 No -26 0.65 No 50 53.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215629252 - NM_000465 BARD1 0 . . . 2.97 85.71 16 5.2 No 33 0.77 Yes 0 0 No -45 0.46 No 25 92.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89681803 + NM_000314 PTEN 0 . . . 2.91 77.43 25 4.25 No -4 0.16 No 0 0 No -27 0.44 No 49 95.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215653212 - NM_000465 BARD1 0 . . . 1.74 56.77 14 4.29 No 76 0.53 No 0 0 No -29 0.35 No 44 25.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1224744 + NM_000455 STK11 0 . . . 0.76 61.19 30 5.77 Yes -1 0.41 No 0 0 No -19 0.64 No 44 53.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68861597 + NM_133509 RAD51B 0 . . . 12.2 88.16 13 5.29 No 68 -1.08 No 0 0 No -21 0.78 Yes 46 59.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94158794 - NM_005591 MRE11 0 . . . 0.12 75.91 21 5.2 No 50 1.78 Yes 0 0 No -23 0.83 Yes 37 74.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190698463 + NM_000534 PMS1 0 . . . 1.3 73.88 14 3.87 No 14 1.13 Yes 0 0 No -22 0.45 No 18 50.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59759236 - NM_032043 BRIP1 0 . . . 0.62 71.76 13 5.1 No 49 0.06 No 0 0 No -24 0.39 No 48 65.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59804529 - NM_032043 BRIP1 0 . . . 1.4 62.13 24 4.99 No 43 -4.33 No 0 0 No -23 0.88 Yes 37 48.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40991460 + NM_001164269 RAD51 0 . . . 1.08 84.22 24 5 No 33 1.41 Yes 0 0 No -21 0.59 No 50 38.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21996094 - NM_000077 CDKN2A 0 . . . 8.29 78 48 6.85 Yes 6 1.42 Yes 0 0 No -27 0.49 No 52 64.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41267352 - NM_007294 BRCA1 0 . . . 1.47 77.63 16 5.05 No 7 1.16 Yes 0 0 No -21 0.78 Yes 51 78.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68573565 + NM_133509 RAD51B 0 . . . 1.06 0 29 4.42 No 19 0.74 No 0 0 No -28 0.57 No 35 84.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37070145 + NM_000249 MLH1 0 . . . 0.24 0 16 5.57 Yes 14 1.5 Yes 0 0 No -20 0.58 No 44 86.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68711154 + NM_133509 RAD51B 0 . . . 10.18 85.6 22 4.8 No 11 1.34 Yes 0 0 No -21 0.96 Yes 47 86.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94228202 - NM_005591 MRE11 0 . . . 2.53 78.75 16 5.38 No 66 1.62 Yes 0 0 No -24 0.66 No 50 66.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75512296 - NM_001040108 MLH3 0 . . . 10 84 27 5.3 No 47 -2.51 No 0 0 No -27 0.57 No 42 93.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69121681 + NM_133509 RAD51B 0 . . . 0.52 0 12 4.12 No 37 0.79 Yes 0 0 No -26 0.57 No 39 74.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69010935 + NM_133509 RAD51B 0 . . . 3.51 74.41 26 6.07 Yes 8 0.7 No 0 0 No -25 0.88 Yes 41 56.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89733307 + NM_000314 PTEN 0 . . . 3.48 71.47 36 5.22 No 0 1.6 Yes 0 0 No -35 0.73 Yes 43 66.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68404500 + NM_133509 RAD51B 0 . . . 1.24 0 22 4.8 No 51 0.75 No 0 0 No -21 0.73 Yes 57 51.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32949497 + NM_000059 BRCA2 0 . . . 1.17 73.82 16 5.77 Yes 42 1.61 Yes 0 0 No -21 0.49 No 16 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89695440 + NM_000314 PTEN 0 . . . 4.14 71.22 20 5 No 64 0.85 Yes 0 0 No -18 0.51 No 51 64.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68849122 + NM_004360 CDH1 0 . . . 2.9 78.26 78 8.05 Yes 12 0.07 No 0 0 No -42 0.18 No 46 71.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37037744 + NM_000249 MLH1 0 . . . 1.56 64.2 51 7.11 Yes -1 0.89 Yes 0 0 No -29 0.4 No 36 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105193443 + NM_021930 RINT1 0 . . . 2.12 77.29 35 5.51 No 74 0.94 Yes 0 0 No -28 0.33 No 48 67.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108205282 + NM_000051 ATM 0 . . . 10.67 91.77 35 7.64 Yes 72 -3.26 No 0 0 No -24 0.44 No 46 55.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47663246 + NM_000251 MSH2 0 . . . 1.51 86.33 19 4.77 No 33 1.44 Yes 0 0 No -25 0.6 No 25 64.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6014324 - NM_000535 PMS2 0 . . . 2.23 0 30 5.66 Yes 39 -3.3 No 0 0 No -25 0.57 No 38 73.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68470055 + NM_133509 RAD51B 0 . . . 7.96 83.93 23 5.34 No 23 0.47 No 0 0 No -22 0.42 No 35 89.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108102902 + NM_000051 ATM 0 . . . 1.97 72.04 45 8.69 Yes 60 0.34 No 0 0 No -29 0.4 No 49 61.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89683459 + NM_000314 PTEN 0 . . . 3.19 76.8 49 5.59 Yes 8 1.22 Yes 0 0 No -29 0.38 No 37 77.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190658353 + NM_000534 PMS1 0 . . . 1.26 0 42 5.67 Yes 76 -5.95 No 0 0 No -27 0.38 No 51 85.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68466067 + NM_133509 RAD51B 0 . . . 6.17 81.94 16 3.98 No 8 1.14 Yes 0 0 No -28 0.5 No 50 57.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190666516 + NM_000534 PMS1 0 . . . 4.21 76.5 39 6.55 Yes 46 0.64 No 0 0 No -29 0.68 Yes 53 33.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68805237 + NM_004360 CDH1 0 . . . 2.63 75.16 35 5.94 Yes 3 1.26 Yes 0 0 No -29 0.34 No 19 73.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59770647 - NM_032043 BRIP1 0 . . . 0.54 80.63 25 5.39 No 59 0.25 No 0 0 No -22 0.77 Yes 44 60.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59864586 - NM_032043 BRIP1 0 . . . 5.11 78.07 26 5.1 No 13 0.08 No 0 0 No -25 0.87 Yes 45 42.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68545118 + NM_133509 RAD51B 0 . . . 6.41 81 25 5 No 43 -2.51 No 0 0 No -25 0.76 Yes 42 49.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68486667 + NM_133509 RAD51B 0 . . . 2.97 59.36 27 5.2 No -4 0.14 No 0 0 No -26 0.76 Yes 37 83.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68355559 + NM_133509 RAD51B 0 . . . 3.7 81.75 20 6.46 Yes 29 -3.93 No 0 0 No -24 0.34 No 43 69.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6032975 - NM_000535 PMS2 0 . . . 0.47 84.17 24 5.45 No 61 1.96 Yes 0 0 No -27 0.53 No 17 6.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6030849 - NM_000535 PMS2 0 . . . 9.42 81.08 21 6.98 Yes 15 0.33 No 0 0 No -20 0.64 No 43 75.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69015946 + NM_133509 RAD51B 0 . . . 0.95 0 19 4.75 No 28 0.51 No 0 0 No -18 0.61 No 34 46.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68838417 + NM_004360 CDH1 0 . . . 0.47 0 49 6.5 Yes 76 -6.08 No 0 0 No -28 0.81 Yes 52 40.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56771524 + NM_058216 RAD51C 0 . . . 4.01 85.13 20 4.84 No 33 0.75 No 0 0 No -19 0.56 No 48 78.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89728487 + NM_000314 PTEN 0 . . . 7.78 78.88 43 6.59 Yes 7 0.98 Yes 0 0 No -42 0.55 No 51 70.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68294480 + NM_133509 RAD51B 0 . . . 6.63 75.47 27 6.61 Yes 50 1.24 Yes 0 0 No -26 0.96 Yes 38 66.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47630692 + NM_000251 MSH2 0 . . . 7.54 84.67 41 6.23 Yes 71 -3.66 No 0 0 No -24 0.96 Yes 48 48.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41258375 - NM_007294 BRCA1 0 . . . 1.22 68.62 28 6.32 Yes 18 0.69 No 0 0 No -27 0.57 No 40 74.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68963078 + NM_133509 RAD51B 0 . . . 11.02 87.01 65 7.25 Yes 70 0.26 No 0 0 No -51 0.45 No 41 74.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152356561 - NM_005431 XRCC2 0 . . . 3.67 70.15 36 5.05 No 72 0.64 No 0 0 No -35 0.71 Yes 43 55.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59860352 - NM_032043 BRIP1 0 . . . 0.2 84.35 16 5.35 No 10 1.21 Yes 0 0 No -25 0.79 Yes 48 78.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52434287 - NM_004656 BAP1 0 . . . 2.83 83.31 24 5.9 Yes 9 0.42 No 0 0 No -23 0.55 No 49 68.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851154 - NM_032043 BRIP1 0 . . . 0.89 81.23 24 3.73 No 41 0.62 No 0 0 No -29 0.61 No 51 78.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89640408 + NM_000314 PTEN 0 . . . 0.81 70.96 33 5.75 Yes 55 -4.99 No 0 0 No -32 0.7 Yes 51 48.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69056678 + NM_133509 RAD51B 0 . . . 6.13 77.44 32 5.51 No 40 -3.89 No 0 0 No -24 0.58 No 37 63.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108144304 + NM_000051 ATM 0 . . . 6.24 82.31 14 4.47 No 58 1.1 Yes 0 0 No -33 0.41 No 55 55.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6013448 - NM_000535 PMS2 0 . . . 1.94 79.75 19 4.8 No 71 -4.89 No 0 0 No -18 0.63 No 61 38.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32944445 + NM_000059 BRCA2 0 . . . 1.97 75.49 20 4.74 No 15 0.76 No 0 0 No -28 0.81 Yes 18 32.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68614900 + NM_133509 RAD51B 0 . . . 1.18 65.73 39 6.43 Yes 7 0.28 No 0 0 No -31 0.77 Yes 40 59.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152370784 - NM_005431 XRCC2 0 . . . 6.47 93.17 29 5.13 No 17 1.43 Yes 0 0 No -28 0.9 Yes 41 92.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90985808 - NM_002485 NBN 0 . . . 1.48 71.21 31 5.93 Yes 67 0.92 Yes 0 0 No -30 0.9 Yes 48 96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68722698 + NM_133509 RAD51B 0 . . . 3.13 0 35 8.54 Yes 45 0.5 No 0 0 No -25 0.9 Yes 46 54.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108231747 + NM_000051 ATM 0 . . . 9.45 86.08 54 6.46 Yes 55 -3.25 No 0 0 No -27 0.92 Yes 51 55.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89673074 + NM_000314 PTEN 0 . . . 9.94 85.65 33 6.27 Yes 5 0.96 Yes 0 0 No -32 0.74 Yes 37 86.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108237255 + NM_000051 ATM 0 . . . 1.66 77.46 46 8.42 Yes 18 0.73 No 0 0 No -45 0.87 Yes 30 69.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68810137 + NM_133509 RAD51B 0 . . . 3.26 77.3 31 5.53 No 57 0.79 Yes 0 0 No -30 0.93 Yes 47 61.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152349280 - NM_005431 XRCC2 0 . . . 0.71 0 16 4.33 No 19 0.15 No 0 0 No -27 0.57 No 39 74.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68403416 + NM_133509 RAD51B 0 . . . 0.68 0 25 5.1 No 17 0.45 No 0 0 No -24 0.66 Yes 46 19.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89643870 + NM_000314 PTEN 0 . . . 0.06 63.42 25 5.1 No 74 0.15 No 0 0 No -24 0.85 Yes 53 44.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90945171 - NM_002485 NBN 0 . . . 2.05 66.2 26 7.08 Yes 46 -4.43 No 0 0 No -25 0.92 Yes 45 87.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68335536 + NM_133509 RAD51B 0 . . . 0.45 83.08 32 5.17 No 33 2.32 Yes 0 0 No -24 0.31 No 48 73.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69014005 + NM_133509 RAD51B 0 . . . 4.81 82.41 33 5.96 Yes 2 1.73 Yes 0 0 No -32 0.58 No 33 64.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190679298 + NM_000534 PMS1 0 . . . 8.1 81.43 14 5.08 No 10 0.48 No 0 0 No -21 0.16 No 39 40.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1220803 + NM_000455 STK11 0 . . . 5.93 75.55 33 6.05 Yes 72 0.65 No 0 0 No -26 0.42 No 48 41.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108241227 + NM_000051 ATM 0 . . . 6.45 78.22 13 5.19 No 2 0.68 No 0 0 No -41 0.33 No 27 72.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59891450 - NM_032043 BRIP1 0 . . . 3.54 78.83 24 5.07 No 3 2.12 Yes 0 0 No -23 0.9 Yes 35 88.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215605723 - NM_000465 BARD1 0 . . . 0.05 58.29 17 5.33 No 22 1.64 Yes 0 0 No -27 0.93 Yes 36 92.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152354011 - NM_005431 XRCC2 0 . . . 2.06 0 51 7.55 Yes 43 -1.62 No 0 0 No -25 0.54 No 44 69.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47629616 + NM_000251 MSH2 0 . . . 5.7 83.37 15 4.31 No 41 1.88 Yes 0 0 No -26 0.71 Yes 46 73.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68916803 + NM_133509 RAD51B 0 . . . 6.49 75.61 19 6.38 Yes 3 0.04 No 0 0 No -19 0.52 No 49 71.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69072282 + NM_133509 RAD51B 0 . . . 1.2 0 17 5.29 No 76 -3.45 No 0 0 No -21 0.65 No 37 44.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47634735 + NM_000251 MSH2 0 . . . 3.25 67.54 24 5.83 Yes 35 0.9 Yes 0 0 No -23 0.72 Yes 42 37.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69016574 + NM_133509 RAD51B 0 . . . 4.46 82.14 27 6.07 Yes 17 1.31 Yes 0 0 No -26 0.67 Yes 45 59.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75478809 - NM_001040108 MLH3 0 . . . 8.2 77.64 18 5.91 Yes 10 1.52 Yes 0 0 No -17 0.31 No 48 60.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40987487 + NM_001164269 RAD51 0 . . . 6.72 74.78 18 4.69 No 52 -3.65 No 0 0 No -24 0.44 No 48 71.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7575950 - NM_000546 TP53 0 . . . 1.12 0 27 7.11 Yes 65 2.17 Yes 0 0 No -26 0.56 No 46 92.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68630963 + NM_133509 RAD51B 0 . . . 3.78 65.17 23 6.77 Yes 59 0.52 No 0 0 No -22 0.5 No 37 61.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40994755 + NM_001164269 RAD51 0 . . . 4.25 81.49 29 7.02 Yes 44 0.42 No 0 0 No -28 0.84 Yes 14 73.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21967042 - NM_000077 CDKN2A 0 . . . 2.96 70.34 26 5.48 No 27 0.58 No 0 0 No -25 0.33 No 41 61.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32894691 + NM_000059 BRCA2 0 . . . 11.86 88.09 22 5 No 9 0.62 No 0 0 No -51 0.33 No 49 59.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68845512 + NM_004360 CDH1 0 . . . 3.17 0 14 5.39 No 32 1.83 Yes 0 0 No -22 0.6 No 26 77.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108120718 + NM_000051 ATM 0 . . . 1.92 68.88 17 3.68 No 25 0.67 No 0 0 No -20 0.27 No 52 46.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41269117 - NM_007294 BRCA1 0 . . . 2.15 76.01 33 5.07 No 29 0.88 Yes 0 0 No -25 0.67 Yes 50 79.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59760680 - NM_032043 BRIP1 0 . . . 1.55 65.24 23 5.35 No 12 0.53 No 0 0 No -22 0.62 No 45 32.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7572190 - NM_000546 TP53 0 . . . 4.33 91.44 19 5 No 65 1.57 Yes 0 0 No -18 0.55 No 47 76.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69012684 + NM_133509 RAD51B 0 . . . 3.54 63.82 24 4.58 No 55 0.79 Yes 0 0 No -23 0.94 Yes 46 58.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6030478 - NM_000535 PMS2 0 . . . 4.8 80.12 16 4.47 No 12 1.73 Yes 0 0 No -50 0.2 No 46 85.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68839261 + NM_004360 CDH1 0 . . . 4.39 79.29 33 5.28 No 9 0.4 No 0 0 No -32 0.79 Yes 49 78.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68572373 + NM_133509 RAD51B 0 . . . 3.99 76.67 24 5.48 No 2 0.24 No 0 0 No -26 0.86 Yes 45 68.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68689801 + NM_133509 RAD51B 0 . . . 7.34 92.93 19 4.8 No 36 1.05 Yes 0 0 No -18 0.62 No 48 87.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37056125 + NM_000249 MLH1 0 . . . 6.99 84.66 17 6.08 Yes -4 0.71 No 0 0 No -28 0.45 No 47 50.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59814765 - NM_032043 BRIP1 0 . . . 5.46 76 22 5.29 No 32 1.87 Yes 0 0 No -49 0.5 No 49 70 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152365385 - NM_005431 XRCC2 0 . . . 7.96 90.27 21 5.54 No 39 -0.74 No 0 0 No -20 0.77 Yes 49 45.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48028903 + NM_000179 MSH6 0 . . . 2.64 0 18 4.9 No 65 0.29 No 0 0 No -36 0.84 Yes 19 58.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37079746 + NM_000249 MLH1 0 . . . 4.62 66.71 21 5 No 30 0.6 No 0 0 No -45 0.56 No 49 44.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68806196 + NM_004360 CDH1 0 . . . 2.07 64.29 57 6.21 Yes 13 0.39 No 0 0 No -22 0.57 No 45 61.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68992501 + NM_133509 RAD51B 0 . . . 3.62 0 42 7.97 Yes 65 0.68 No 0 0 No -27 0.79 Yes 45 57.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68350354 + NM_133509 RAD51B 0 . . . 1.52 48.75 23 6.57 Yes 45 0.48 No 0 0 No -22 0.58 No 52 41.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94222318 - NM_005591 MRE11 0 . . . 7.63 82.6 23 5.2 No 59 1.18 Yes 0 0 No -22 0.74 Yes 46 73.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47695758 + NM_000251 MSH2 0 . . . 5.27 79.64 30 5.64 Yes 52 1.03 Yes 0 0 No -29 0.91 Yes 51 59.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108190191 + NM_000051 ATM 0 . . . 5.3 66.42 10 5.1 No 1 -0.84 No 0 0 No -23 0.75 Yes 38 67.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37083030 + NM_000249 MLH1 0 . . . 3.78 64.59 35 7.13 Yes -2 1.01 Yes 0 0 No -34 0.37 No 60 57.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190728411 + NM_000534 PMS1 0 . . . 7.11 75.3 24 4.9 No 55 1.31 Yes 0 0 No -20 0.5 No 48 71.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75515336 - NM_001040108 MLH3 0 . . . 9.72 93.34 28 5.2 No 30 0.29 No 0 0 No -27 0.88 Yes 46 61.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59775927 - NM_032043 BRIP1 0 . . . 1.83 59.59 22 5.29 No 27 0.4 No 0 0 No -25 0.75 Yes 31 39.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68325855 + NM_133509 RAD51B 0 . . . 1.02 73.3 22 4.76 No 29 1.82 Yes 0 0 No -21 0.85 Yes 29 84.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105189792 + NM_021930 RINT1 0 . . . 3.31 89.66 66 6.17 Yes 73 -2.01 No 0 0 No -25 0.74 Yes 48 57.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94204510 - NM_005591 MRE11 0 . . . 4.78 78.92 18 4.13 No 59 0.23 No 0 0 No -26 0.51 No 43 58.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75493725 - NM_001040108 MLH3 0 . . . 6.5 86.2 45 7.18 Yes 52 1.47 Yes 0 0 No -33 0.6 No 49 88.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59929865 - NM_032043 BRIP1 0 . . . 4.03 85.02 41 5.61 Yes 4 1.17 Yes 0 0 No -23 0.65 No 43 47.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68920098 + NM_133509 RAD51B 0 . . . 3.66 63.27 18 4.81 No 73 -4.45 No 0 0 No -26 0.75 Yes 41 38.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215634302 - NM_000465 BARD1 0 . . . 2.53 85.02 15 3.85 No 65 0.71 No 0 0 No -19 0.46 No 51 71.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59867084 - NM_032043 BRIP1 0 . . . 5.57 77.52 25 4.09 No 53 1.04 Yes 0 0 No -32 0.42 No 39 75.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41207350 - NM_007294 BRCA1 0 . . . 0.32 59.93 9 3.87 No 47 -1.14 No 0 0 No -27 0.95 Yes 47 39.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56803840 + NM_058216 RAD51C 0 . . . 2.84 69.72 42 6.78 Yes 50 -4.84 No 0 0 No -41 0.85 Yes 44 48.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47697333 + NM_000251 MSH2 0 . . . 2.39 80.12 23 4.2 No 6 1.48 Yes 0 0 No -22 0.88 Yes 45 53.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47678430 + NM_000251 MSH2 0 . . . 2.29 77.71 39 5.37 No 69 -4.41 No 0 0 No -34 0.64 No 51 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108204778 + NM_000051 ATM 0 . . . 4.39 85.78 26 5.82 Yes 57 1.38 Yes 0 0 No -25 0.91 Yes 46 50.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47750348 + NM_000251 MSH2 0 . . . 5.65 74.57 23 4.92 No 14 0.37 No 0 0 No -22 0.8 Yes 43 72.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69098279 + NM_133509 RAD51B 0 . . . 0.74 72.18 38 6.1 Yes -2 0.67 No 0 0 No -32 0.54 No 47 84.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69015112 + NM_133509 RAD51B 0 . . . 6.97 78.77 9 4.9 No 9 0.79 Yes 0 0 No -22 0.6 No 49 88.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68798645 + NM_133509 RAD51B 0 . . . 0.56 71.47 22 5.19 No 54 -5.19 No 0 0 No -22 0.66 No 47 23.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1207463 + NM_000455 STK11 0 . . . 0.93 62.84 21 5.04 No 75 0.07 No 0 0 No -20 0.52 No 51 76.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215606175 - NM_000465 BARD1 0 . . . 1.31 73.18 58 8.38 Yes 41 0.2 No 0 0 No -24 0.42 No 49 24.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68316161 + NM_133509 RAD51B 0 . . . 0.33 68.06 15 4.58 No 65 0.18 No 0 0 No -45 0.55 No 48 77.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68308926 + NM_133509 RAD51B 0 . . . 1.11 76.42 14 4.9 No 23 0.92 Yes 0 0 No -21 0.68 Yes 46 95.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190737546 + NM_000534 PMS1 0 . . . 5.44 80.12 35 5.92 Yes 10 1.29 Yes 0 0 No -34 0.66 No 48 84.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215604236 - NM_000465 BARD1 0 . . . 4.09 78.52 15 4.58 No 7 1.16 Yes 0 0 No -60 0.65 No 45 65.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37057834 + NM_000249 MLH1 0 . . . 3.56 79.07 13 4.3 No 10 0.03 No 0 0 No -26 0.6 No 48 91.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89723990 + NM_000314 PTEN 0 . . . 2.89 78.4 23 6.27 Yes 11 0.41 No 0 0 No -22 0.68 Yes 47 93.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108095668 + NM_000051 ATM 0 . . . 4.4 81.7 29 5.25 No 9 0.16 No 0 0 No -28 0.72 Yes 41 57.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56797058 + NM_058216 RAD51C 0 . . . 3 84.19 16 5.04 No 73 -2.05 No 0 0 No -20 0.5 No 51 56.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131974050 + NM_005732 RAD50 0 . . . 1.16 61.78 26 5.46 No 28 0.15 No 0 0 No -25 0.73 Yes 39 37.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152365582 - NM_005431 XRCC2 0 . . . 6.69 84.36 26 4.98 No 19 0.38 No 0 0 No -40 0.58 No 38 81.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29092909 - NM_001005735 CHEK2 0 . . . 4.55 72.5 34 4.61 No 75 0.62 No 0 0 No -31 0.41 No 38 71.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105197497 + NM_021930 RINT1 0 . . . 0.44 66.17 17 4.7 No 44 -4.13 No 0 0 No -16 0.57 No 39 60.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105191500 + NM_021930 RINT1 0 . . . 3.22 0 22 5.07 No 58 1.16 Yes 0 0 No -21 0.41 No 39 68.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68829287 + NM_004360 CDH1 0 . . . 1.42 81.83 44 7.92 Yes 17 -3.51 No 0 0 No -21 0.79 Yes 16 49.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220741 - NM_007294 BRCA1 0 . . . 3.3 72.72 17 5.38 No 68 1.63 Yes 0 0 No -22 0.39 No 52 72.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68781848 + NM_004360 CDH1 0 . . . 3.6 85.02 36 4.91 No 4 1.2 Yes 0 0 No -35 0.75 Yes 41 77.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69062507 + NM_133509 RAD51B 0 . . . 0.59 73.07 35 5.91 Yes 50 -4.97 No 0 0 No -28 0.7 Yes 39 87.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131950269 + NM_005732 RAD50 0 . . . 3.16 73.87 26 5 No 57 -4.02 No 0 0 No -28 0.41 No 49 39.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68930228 + NM_133509 RAD51B 0 . . . 1.78 76.94 16 6.86 Yes 73 -5.45 No 0 0 No -28 0.49 No 46 35.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41229394 - NM_007294 BRCA1 0 . . . 2.9 80.22 27 6.78 Yes 75 -5.78 No 0 0 No -26 0.75 Yes 48 41.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68868745 + NM_133509 RAD51B 0 . . . 5.13 74.24 21 5.5 No 30 -2.98 No 0 0 No -24 0.5 No 45 62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41009507 + NM_001164269 RAD51 0 . . . 2.95 80.22 29 5.74 Yes 58 -4.06 No 0 0 No -26 0.71 Yes 43 48.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68730875 + NM_133509 RAD51B 0 . . . 5.2 78.54 17 4.58 No 67 1.3 Yes 0 0 No -38 0.41 No 46 37.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68846688 + NM_133509 RAD51B 0 . . . 2.47 61.67 14 5.19 No 63 1.95 Yes 0 0 No -20 0.52 No 51 90.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47649760 + NM_000251 MSH2 0 . . . 1.27 76.63 22 4.57 No 71 -5.28 No 0 0 No -24 0.83 Yes 48 82.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105198028 + NM_021930 RINT1 0 . . . 1.79 0 15 4.54 No 69 -5.08 No 0 0 No -26 0.67 Yes 45 57.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23650923 - NM_024675 PALB2 0 . . . 6.73 82.31 12 5.2 No 58 1.16 Yes 0 0 No -23 0.54 No 55 43.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68660151 + NM_133509 RAD51B 0 . . . 1.01 69.26 21 6.86 Yes 76 0.59 No 0 0 No -20 0.54 No 43 90.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68373050 + NM_133509 RAD51B 0 . . . 6.4 89.31 32 6.45 Yes 50 0.28 No 0 0 No -31 0.68 Yes 44 78.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68928710 + NM_133509 RAD51B 0 . . . 8.82 76.36 19 5.45 No 65 -3.51 No 0 0 No -18 0.6 No 47 28.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68987444 + NM_133509 RAD51B 0 . . . 3.33 74.23 21 5.58 Yes 59 1.24 Yes 0 0 No -21 0.81 Yes 45 44.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32935147 + NM_000059 BRCA2 0 . . . 3.38 67.79 29 5.86 Yes 39 -3.67 No 0 0 No -28 0.65 No 45 38.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68560163 + NM_133509 RAD51B 0 . . . 1.23 82.55 30 5.88 Yes 30 0.49 No 0 0 No -23 0.32 No 28 71.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105204412 + NM_021930 RINT1 0 . . . 0.22 67.4 45 6.83 Yes 71 0.65 No 0 0 No -30 0.52 No 42 38.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59942721 - NM_032043 BRIP1 0 . . . 2.83 56.32 29 5.38 No 14 0.56 No 0 0 No -29 0.86 Yes 34 55.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59921850 - NM_032043 BRIP1 0 . . . 0.88 79.89 15 4.58 No 3 0.75 No 0 0 No -14 0.32 No 50 85.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89660880 + NM_000314 PTEN 0 . . . 0.27 0 16 4.69 No 43 0.29 No 0 0 No -23 0.85 Yes 54 57.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190733709 + NM_000534 PMS1 0 . . . 3.91 87.37 16 5.23 No 41 1.47 Yes 0 0 No -39 0.34 No 42 73.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47693630 + NM_000251 MSH2 0 . . . 1.28 68.75 29 7.07 Yes 41 0.09 No 0 0 No -28 0.91 Yes 46 36.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152366844 - NM_005431 XRCC2 0 . . . 5.59 79.53 22 5.69 Yes -2 -1.67 No 0 0 No -27 0.6 No 39 73.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215598167 - NM_000465 BARD1 0 . . . 2.07 71.52 42 5.57 Yes 4 0.13 No 0 0 No -27 0.39 No 42 50.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47722644 + NM_000251 MSH2 0 . . . 4.19 78.14 19 5.48 No 9 1.16 Yes 0 0 No -18 0.55 No 49 85.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108126118 + NM_000051 ATM 0 . . . 4.77 75.19 18 4.25 No 12 0.84 Yes 0 0 No -21 0.42 No 46 60.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37042267 + NM_000249 MLH1 0 . . . 1.24 76.63 31 5.57 Yes 51 0.45 No 0 0 No -30 0.7 Yes 48 75.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68829818 + NM_004360 CDH1 0 . . . 1.2 74.68 27 6.93 Yes 69 -3.21 No 0 0 No -26 0.83 Yes 54 50.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108178912 + NM_000051 ATM 0 . . . 3.97 72.07 18 4.41 No 44 1.09 Yes 0 0 No -20 0.62 No 52 66.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32935408 + NM_000059 BRCA2 0 . . . 1 78.94 20 4.66 No 73 -5.15 No 0 0 No -20 0.58 No 43 67.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68877604 + NM_133509 RAD51B 0 . . . 0.62 67.38 16 4.67 No 47 -1.51 No 0 0 No -20 0.81 Yes 32 36.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69011787 + NM_133509 RAD51B 0 . . . 7.07 89.3 21 5.81 Yes 48 -1.61 No 0 0 No -20 0.8 Yes 40 44.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68956290 + NM_133509 RAD51B 0 . . . 6.04 82.01 21 5.83 Yes 41 0.89 Yes 0 0 No -27 0.47 No 46 76.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69102921 + NM_133509 RAD51B 0 . . . 0.89 71.23 46 6.62 Yes 44 -3.15 No 0 0 No -20 0.87 Yes 48 83.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68616846 + NM_133509 RAD51B 0 . . . 1.72 71.54 15 5.48 No 7 0.98 Yes 0 0 No -50 0.5 No 51 84.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68284685 + NM_133509 RAD51B 0 . . . 2.83 77.03 28 5.2 No 61 1.07 Yes 0 0 No -27 0.6 No 36 82.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215594002 - NM_000465 BARD1 0 . . . 0.53 61.82 26 4.2 No 49 -1.08 No 0 0 No -23 0.93 Yes 38 50.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90973269 - NM_002485 NBN 0 . . . 7.88 91.78 17 7.53 Yes 6 1.36 Yes 0 0 No -24 0.78 Yes 52 40.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29107229 - NM_001005735 CHEK2 0 . . . 2.04 58.06 44 7.77 Yes 50 0.27 No 0 0 No -27 0.49 No 44 36.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41015965 + NM_001164269 RAD51 0 . . . 2.33 65.15 17 4.69 No 35 0.49 No 0 0 No -17 0.31 No 39 86.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108200401 + NM_000051 ATM 0 . . . 2.38 66.1 94 9.76 Yes 18 0.49 No 0 0 No -32 0.61 No 32 61.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015488 + NM_000179 MSH6 0 . . . 7.73 91.36 22 4.96 No 9 0.63 No 0 0 No -21 0.7 Yes 49 92.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45792979 - NM_001048171 MUTYH 0 . . . 2.55 65.32 19 4.68 No -3 0.48 No 0 0 No -19 0.55 No 44 31.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68521032 + NM_133509 RAD51B 0 . . . 1.45 0 34 7.78 Yes 60 0.69 No 0 0 No -33 0.84 Yes 29 38.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90986010 - NM_002485 NBN 0 . . . 1.85 0 37 6.99 Yes 76 0.3 No 0 0 No -36 0.81 Yes 52 49.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68802323 + NM_004360 CDH1 0 . . . 4.39 74.27 17 4.8 No 2 0.31 No 0 0 No -37 0.38 No 50 77.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29114228 - NM_001005735 CHEK2 0 . . . 1.32 0 51 4.84 No 16 0.58 No 0 0 No -25 0.52 No 25 50.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84395243 - NM_139076 FAM175A 0 . . . 0.53 73.43 15 5.57 Yes 28 1.46 Yes 0 0 No -28 0.27 No 49 56.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94218651 - NM_005591 MRE11 0 . . . 7.18 77.82 15 4.48 No 23 0.26 No 0 0 No -21 0.4 No 35 73.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29121555 - NM_001005735 CHEK2 0 . . . 4.69 71.79 14 6.22 Yes 61 0.83 Yes 0 0 No -27 0.63 No 41 85.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94180175 - NM_005591 MRE11 0 . . . 2.1 68.15 33 5.78 Yes 36 1.45 Yes 0 0 No -25 0.7 Yes 22 70.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152373236 - NM_005431 XRCC2 0 . . . 3.17 69.59 25 4.87 No -1 0.17 No 0 0 No -24 0.92 Yes 36 23.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131909402 + NM_005732 RAD50 0 . . . 0.34 60.68 51 7.74 Yes 38 0.21 No 0 0 No -34 0.65 No 60 39.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59832040 - NM_032043 BRIP1 0 . . . 4.38 72.64 16 4.69 No 32 0.92 Yes 0 0 No -51 0.63 No 42 87.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190678959 + NM_000534 PMS1 0 . . . 0.45 71.83 41 7.17 Yes 6 -2.6 No 0 0 No -18 0.24 No 24 77.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68714288 + NM_133509 RAD51B 0 . . . 3.51 73.38 23 6.13 Yes 62 0.13 No 0 0 No -29 0.66 No 45 67.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68736447 + NM_133509 RAD51B 0 . . . 1.03 72.17 31 5.48 No 58 1.25 Yes 0 0 No -30 0.86 Yes 42 95.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68613321 + NM_133509 RAD51B 0 . . . 3.04 82.93 17 5.17 No 62 -2.42 No 0 0 No -37 0.83 Yes 45 76.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59900436 - NM_032043 BRIP1 0 . . . 4.61 74.95 22 4.8 No 53 1.31 Yes 0 0 No -20 0.58 No 42 50.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68742748 + NM_133509 RAD51B 0 . . . 2.94 0 11 4.67 No 55 -3.08 No 0 0 No -50 0.78 Yes 47 39.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131908061 + NM_005732 RAD50 0 . . . 6.12 70.67 70 9.96 Yes 23 0.19 No 0 0 No -26 0.61 No 42 87.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68757760 + NM_133509 RAD51B 0 . . . 4.74 82.31 34 8.16 Yes 59 1.03 Yes 0 0 No -31 0.44 No 54 59.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68851034 + NM_133509 RAD51B 0 . . . 4.01 85.39 47 7.28 Yes 48 1.46 Yes 0 0 No -20 0.27 No 42 90.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40986892 + NM_001164269 RAD51 0 . . . 0.13 64.94 15 5.29 No 68 -4.78 No 0 0 No -46 0.27 No 47 14.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68566266 + NM_133509 RAD51B 0 . . . 3.56 81.35 18 6.58 Yes 41 0.9 Yes 0 0 No -18 0.36 No 30 48.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108148394 + NM_000051 ATM 0 . . . 1.95 68.38 17 4.58 No 45 1.53 Yes 0 0 No -21 0.5 No 13 56.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68380963 + NM_133509 RAD51B 0 . . . 5.1 70.85 14 4.47 No 23 1.61 Yes 0 0 No -36 0.48 No 45 73.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131934836 + NM_005732 RAD50 0 . . . 6.22 73.32 21 6.63 Yes 72 0.82 Yes 0 0 No -21 0.59 No 43 57.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47713004 + NM_000251 MSH2 0 . . . 5.94 92.67 19 4.8 No 52 0.01 No 0 0 No -39 0.51 No 44 75.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23642574 - NM_024675 PALB2 0 . . . 2.86 84 29 4.87 No 56 1.74 Yes 0 0 No -28 0.94 Yes 15 72.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59765995 - NM_032043 BRIP1 0 . . . 2.61 77.73 22 6.23 Yes 73 1.12 Yes 0 0 No -21 0.8 Yes 48 24.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89676806 + NM_000314 PTEN 0 . . . 5.74 72.46 36 6.93 Yes 2 0.56 No 0 0 No -35 0.55 No 49 47.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89664487 + NM_000314 PTEN 0 . . . 5.15 69.87 35 6.69 Yes 19 0.74 No 0 0 No -34 0.77 Yes 39 75.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89639758 + NM_000314 PTEN 0 . . . 1.63 64.26 30 5.9 Yes 25 0.17 No 0 0 No -29 0.87 Yes 23 88.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105183523 + NM_021930 RINT1 0 . . . 2.97 74.96 20 4.05 No 14 1.22 Yes 0 0 No -54 0.44 No 44 94.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32895450 + NM_000059 BRCA2 0 . . . 3.24 74.39 17 4.12 No 56 0.84 Yes 0 0 No -29 0.68 Yes 46 62.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152360552 - NM_005431 XRCC2 0 . . . 1.64 73.18 15 6.33 Yes 65 -2.56 No 0 0 No -14 0.46 No 47 29.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68428470 + NM_133509 RAD51B 0 . . . 6.72 83.95 19 5 No 24 0.69 No 0 0 No -25 0.51 No 34 90.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89625134 + NM_000314 PTEN 0 . . . 3.41 85.33 16 5.59 Yes 39 0.44 No 0 0 No -23 0.61 No 52 76.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56768216 + NM_058216 RAD51C 0 . . . 3.23 75.4 28 4.49 No 3 0.27 No 0 0 No -21 0.64 No 48 65.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69088597 + NM_133509 RAD51B 0 . . . 1.36 69.41 16 5.1 No 47 -2.78 No 0 0 No -22 0.85 Yes 47 63.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68915190 + NM_133509 RAD51B 0 . . . 2.69 87.24 25 5.2 No 61 0.6 No 0 0 No -24 0.89 Yes 39 50.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68679995 + NM_133509 RAD51B 0 . . . 7.12 86.4 35 6.88 Yes 12 0.99 Yes 0 0 No -34 0.83 Yes 33 63.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41024432 + NM_001164269 RAD51 0 . . . 4.85 75.46 30 6.32 Yes 8 0.83 Yes 0 0 No -29 0.79 Yes 47 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215672968 - NM_000465 BARD1 0 . . . 6.47 85.02 24 5.39 No 5 1.25 Yes 0 0 No -23 0.75 Yes 42 73.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68639596 + NM_133509 RAD51B 0 . . . 8.23 78.6 23 4.76 No 36 0.79 Yes 0 0 No -22 0.36 No 44 69.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59811806 - NM_032043 BRIP1 0 . . . 9.13 83.29 12 4.78 No 29 0.91 Yes 0 0 No -25 0.66 No 41 76.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89660558 + NM_000314 PTEN 0 . . . 7.35 89.4 28 4.91 No 3 0.85 Yes 0 0 No -20 0.63 No 51 84.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69144475 + NM_133509 RAD51B 0 . . . 1.21 0 11 4.69 No 62 -5.38 No 0 0 No -57 0.36 No 43 46.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47678838 + NM_000251 MSH2 0 . . . 3.96 81.16 18 5.11 No 14 0.33 No 0 0 No -31 0.41 No 44 90.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108205467 + NM_000051 ATM 0 . . . 0.17 79.27 28 5.2 No 76 1.45 Yes 0 0 No -30 0.83 Yes 35 43.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68828207 + NM_004360 CDH1 0 . . . 5.76 71.34 47 7.3 Yes 71 -4.31 No 0 0 No -24 0.57 No 44 58.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105209039 + NM_021930 RINT1 0 . . . 5.16 80.35 30 5.66 Yes 13 0.35 No 0 0 No -29 0.61 No 45 80.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32931021 + NM_000059 BRCA2 0 . . . 2.21 0 18 4.9 No 70 0.81 Yes 0 0 No -25 0.77 Yes 30 60.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215600836 - NM_000465 BARD1 0 . . . 7.3 81.59 17 5.07 No 59 0.46 No 0 0 No -30 0.41 No 47 51.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68874212 + NM_133509 RAD51B 0 . . . 7.2 70.39 23 5.39 No 15 0.61 No 0 0 No -22 0.87 Yes 40 62.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68532529 + NM_133509 RAD51B 0 . . . 4.76 70.16 31 4.95 No 38 -3.84 No 0 0 No -23 0.72 Yes 45 79.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152348506 - NM_005431 XRCC2 0 . . . 9.36 88.27 25 6.08 Yes 73 1.29 Yes 0 0 No -24 0.96 Yes 36 68.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6032497 - NM_000535 PMS2 0 . . . 5.26 75.19 33 4.54 No 60 0.29 No 0 0 No -28 0.89 Yes 48 37.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94199707 - NM_005591 MRE11 0 . . . 7.05 73.84 24 5.89 Yes 41 0.56 No 0 0 No -23 0.93 Yes 44 67.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68779475 + NM_133509 RAD51B 0 . . . 3.2 83.7 35 5.92 Yes 15 1.18 Yes 0 0 No -34 0.55 No 35 54.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68572761 + NM_133509 RAD51B 0 . . . 7.79 82.64 13 5.29 No -2 0.68 No 0 0 No -23 0.44 No 48 64.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32942742 + NM_000059 BRCA2 0 . . . 4.25 77.72 25 5.52 No 5 0.82 Yes 0 0 No -24 0.61 No 46 85.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89721056 + NM_000314 PTEN 0 . . . 2.09 70.35 32 5.93 Yes 75 0.49 No 0 0 No -24 0.38 No 48 83.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59787078 - NM_032043 BRIP1 0 . . . 2.2 78.59 9 3.87 No 32 1.46 Yes 0 0 No -41 0.64 No 44 67.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37087381 + NM_000249 MLH1 0 . . . 3.6 85.02 32 4.49 No 4 1.05 Yes 0 0 No -31 0.58 No 54 46.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68432293 + NM_133509 RAD51B 0 . . . 3.54 84.15 35 6.32 Yes 11 1.22 Yes 0 0 No -37 0.64 No 47 76.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108153821 + NM_000051 ATM 0 . . . 0.47 62.84 16 4.86 No 52 -5.4 No 0 0 No -22 0.6 No 52 51.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90964024 - NM_002485 NBN 0 . . . 6.68 86.65 27 5.61 Yes 50 -3.11 No 0 0 No -26 0.54 No 51 37.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84399797 - NM_139076 FAM175A 0 . . . 0.26 59.36 49 7.54 Yes 67 1.11 Yes 0 0 No -38 0.27 No 45 93.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59786353 - NM_032043 BRIP1 0 . . . 6.13 87.32 10 5 No 46 1.51 Yes 0 0 No -18 0.6 No 41 53.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94194996 - NM_005591 MRE11 0 . . . 2.58 69.49 20 5 No 21 1.71 Yes 0 0 No -26 0.59 No 37 85.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41227345 - NM_007294 BRCA1 0 . . . 6.58 85.32 20 5 No 19 1.25 Yes 0 0 No -26 0.43 No 51 68.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68714959 + NM_133509 RAD51B 0 . . . 8.55 87.64 37 6.93 Yes 36 0.63 No 0 0 No -36 0.64 No 55 44.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68569735 + NM_133509 RAD51B 0 . . . 3.78 67.91 27 5.28 No 51 -3.8 No 0 0 No -26 0.62 No 57 33.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68729837 + NM_133509 RAD51B 0 . . . 0.8 75.28 21 4.04 No 10 0.76 No 0 0 No -21 0.31 No 42 74.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68898244 + NM_133509 RAD51B 0 . . . 2.11 0 20 7.13 Yes 12 0.57 No 0 0 No -19 0.44 No 46 95.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215662666 - NM_000465 BARD1 0 . . . 4.51 72.2 54 8.39 Yes 61 0.37 No 0 0 No -53 0.57 No 37 57.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190677814 + NM_000534 PMS1 0 . . . 6.82 79.88 52 7.29 Yes 46 0.93 Yes 0 0 No -52 0.88 Yes 42 88.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108240904 + NM_000051 ATM 0 . . . 4.76 78.13 15 4.37 No 57 0.79 Yes 0 0 No -32 0.69 Yes 44 73.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68941078 + NM_133509 RAD51B 0 . . . 10.55 84.49 20 5.74 Yes 11 0.74 No 0 0 No -19 0.78 Yes 40 81.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108104828 + NM_000051 ATM 0 . . . 5.22 64.09 44 7.12 Yes 30 0.9 Yes 0 0 No -32 0.6 No 49 75.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68398871 + NM_133509 RAD51B 0 . . . 7.78 83.94 44 5.47 No 1 0.84 Yes 0 0 No -21 0.8 Yes 26 55.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47753425 + NM_000251 MSH2 0 . . . 0.25 63.14 12 4.07 No 70 1.11 Yes 0 0 No -36 0.7 Yes 42 47.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37050809 + NM_000249 MLH1 0 . . . 0.55 0 28 5.24 No 17 1.7 Yes 0 0 No -27 0.67 Yes 14 59.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1226858 + NM_000455 STK11 0 . . . 2.4 73.59 24 4.13 No NA NA NA 0 0 No -24 0.3 No 37 54.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68867434 + NM_133509 RAD51B 0 . . . 1.62 68.9 14 5 No 76 -2.57 No 0 0 No -24 0.72 Yes 36 67.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29112219 - NM_001005735 CHEK2 0 . . . 2.79 73.66 33 4.6 No 70 -3.07 No 0 0 No -32 0.7 Yes 41 68.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47683329 + NM_000251 MSH2 0 . . . 2.41 68.22 66 9.28 Yes 15 0.75 No 0 0 No -45 0.81 Yes 43 75.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56799994 + NM_058216 RAD51C 0 . . . 5.33 75.77 26 6.17 Yes 38 0.7 No 0 0 No -28 0.4 No 45 82.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69085060 + NM_133509 RAD51B 0 . . . 6.55 82.31 17 4.58 No 69 1.75 Yes 0 0 No -16 0.8 Yes 42 53.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105174562 + NM_021930 RINT1 0 . . . 6.46 89.36 27 5.73 Yes 2 1.57 Yes 0 0 No -26 0.75 Yes 50 80.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59900485 - NM_032043 BRIP1 0 . . . 0.21 74.36 41 6.85 Yes 4 1.34 Yes 0 0 No -34 0.45 No 47 42.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68720769 + NM_133509 RAD51B 0 . . . 6 87.73 19 5.62 Yes 62 1.32 Yes 0 0 No -23 0.78 Yes 46 94.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29086287 - NM_001005735 CHEK2 0 . . . 0.77 81.83 17 5.92 Yes 34 1.29 Yes 0 0 No -16 0.64 No 46 89.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68775086 + NM_004360 CDH1 0 . . . 7.56 89.89 37 5.74 Yes 8 0.02 No 0 0 No -23 0.65 No 50 92.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215658973 - NM_000465 BARD1 0 . . . 4.13 84.03 32 5.48 No 22 0.57 No 0 0 No -31 0.51 No 36 95.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108236175 + NM_000051 ATM 0 . . . 3.26 84.16 34 6.28 Yes 3 0.06 No 0 0 No -33 0.38 No 48 80.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69049537 + NM_133509 RAD51B 0 . . . 1.2 67.82 23 4.83 No 60 -4.72 No 0 0 No -22 0.74 Yes 43 61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68695607 + NM_133509 RAD51B 0 . . . 0.08 0 17 6.85 Yes 69 1 Yes 0 0 No -27 0.37 No 41 51.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7576359 - NM_000546 TP53 0 . . . 3.93 71.98 29 4.93 No 59 1.45 Yes 0 0 No -28 0.71 Yes 42 92.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108187388 + NM_000051 ATM 0 . . . 1.62 74.68 27 5.74 Yes 53 0.66 No 0 0 No -26 0.88 Yes 54 26.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68899474 + NM_133509 RAD51B 0 . . . 6.32 79.64 25 5.96 Yes 62 1.26 Yes 0 0 No -24 0.84 Yes 52 43.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94225631 - NM_005591 MRE11 0 . . . 2.01 67.44 35 4.68 No 3 1.2 Yes 0 0 No -34 0.51 No 32 53.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47641459 + NM_000251 MSH2 0 . . . 2.32 0 50 5.26 No 13 0.87 Yes 0 0 No -36 0.81 Yes 45 47.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59912704 - NM_032043 BRIP1 0 . . . 4.5 79.75 21 4.79 No 31 0.04 No 0 0 No -20 0.78 Yes 47 52.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68579640 + NM_133509 RAD51B 0 . . . 2.69 72.84 23 5.74 Yes 36 -2.34 No 0 0 No -22 0.82 Yes 44 51.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68870752 + NM_004360 CDH1 0 . . . 5.93 87.4 22 5.88 Yes 21 0.64 No 0 0 No -21 0.36 No 43 72.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108199104 + NM_000051 ATM 0 . . . 0.07 0 36 7.21 Yes 45 1.12 Yes 0 0 No -35 0.77 Yes 13 46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68799765 + NM_133509 RAD51B 0 . . . 2.81 71.08 23 6.01 Yes 64 -3.56 No 0 0 No -22 0.47 No 41 29.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190707096 + NM_000534 PMS1 0 . . . 1.88 0 38 6.31 Yes 71 1.5 Yes 0 0 No -23 0.47 No 31 57.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47796495 + NM_000251 MSH2 0 . . . 0.66 0 16 3.99 No 3 0.62 No 0 0 No -21 0.76 Yes 50 66.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1215015 + NM_000455 STK11 0 . . . 2.8 91.37 16 6.98 Yes 57 0.45 No 0 0 No -31 0.52 No 44 28.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68815650 + NM_004360 CDH1 0 . . . 0.98 80.49 11 4.8 No 23 0.89 Yes 0 0 No -18 0.72 Yes 48 86.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68859614 + NM_133509 RAD51B 0 . . . 0.14 82.16 36 5.86 Yes 76 1.54 Yes 0 0 No -25 0.43 No 44 30.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68766774 + NM_133509 RAD51B 0 . . . 2.93 84.09 31 5.89 Yes 10 0.73 No 0 0 No -28 0.74 Yes 48 74.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68632743 + NM_133509 RAD51B 0 . . . 2.19 70.14 20 4.8 No 50 0.78 Yes 0 0 No -19 0.84 Yes 46 75.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69080647 + NM_133509 RAD51B 0 . . . 5.98 75.77 21 5.29 No 54 1.28 Yes 0 0 No -24 0.56 No 43 80.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90962132 - NM_002485 NBN 0 . . . 0.71 68.84 22 5.29 No 45 0.3 No 0 0 No -45 0.57 No 30 67.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37074449 + NM_000249 MLH1 0 . . . 4.77 75.53 51 5.89 Yes 72 0.33 No 0 0 No -23 0.89 Yes 47 62.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190726717 + NM_000534 PMS1 0 . . . 1.57 86.15 17 5.77 Yes 31 0.93 Yes 0 0 No -27 0.63 No 35 58.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37055546 + NM_000249 MLH1 0 . . . 4.36 72.62 12 4.54 No 45 -2.13 No 0 0 No -15 0.37 No 40 59.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538605 + NM_133509 RAD51B 0 . . . 4 85.71 48 8.27 Yes 25 -2.26 No 0 0 No -22 0.51 No 33 43.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68311701 + NM_133509 RAD51B 0 . . . 1.13 76.69 18 4.69 No 56 0.5 No 0 0 No -17 0.53 No 44 61.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190735447 + NM_000534 PMS1 0 . . . 0.27 55.69 18 4.71 No 27 -2.53 No 0 0 No -43 0.27 No 47 39.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69018348 + NM_133509 RAD51B 0 . . . 2.17 71.12 24 4.45 No 73 1.24 Yes 0 0 No -29 0.31 No 26 87.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69122010 + NM_133509 RAD51B 0 . . . 0.76 65.13 28 5.47 No 75 1.18 Yes 0 0 No -26 0.44 No 29 74.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32903232 + NM_000059 BRCA2 0 . . . 1.18 0 43 5.95 Yes 68 1.45 Yes 0 0 No -24 0.4 No 51 51.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190709046 + NM_000534 PMS1 0 . . . 5.45 74.49 46 7.14 Yes 73 1.54 Yes 0 0 No -22 0.83 Yes 36 78.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68923245 + NM_133509 RAD51B 0 . . . 2.17 83.07 33 7.62 Yes 72 -3.59 No 0 0 No -32 0.59 No 49 47.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69043870 + NM_133509 RAD51B 0 . . . 6.34 75.78 9 3.64 No -4 1.43 Yes 0 0 No -22 0.27 No 44 84.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47748189 + NM_000251 MSH2 0 . . . 0.88 80.8 15 3.87 No 44 -0.83 No 0 0 No -24 0.82 Yes 51 43.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29091334 - NM_001005735 CHEK2 0 . . . 2.97 73.74 34 6.32 Yes 11 1.08 Yes 0 0 No -41 0.6 No 47 92.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7581185 - NM_000546 TP53 0 . . . 3.29 80.08 38 6.44 Yes 54 -4.21 No 0 0 No -29 0.58 No 42 34.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215645535 - NM_000465 BARD1 0 . . . 2.04 69.98 16 5.44 No 28 0.16 No 0 0 No -45 0.64 No 52 69.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104166461 - NM_001100119 XRCC3 0 . . . 3.98 75.89 35 6.37 Yes 28 0.79 Yes 0 0 No -22 0.72 Yes 50 35.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68895180 + NM_133509 RAD51B 0 . . . 2.6 78.79 28 5.29 No 65 0.23 No 0 0 No -27 0.72 Yes 40 58.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37034151 + NM_000249 MLH1 0 . . . 2.7 85.14 31 6.63 Yes 35 0.32 No 0 0 No -30 0.92 Yes 54 47.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89716810 + NM_000314 PTEN 0 . . . 3.66 76.63 18 4.72 No 18 0.36 No 0 0 No -17 0.45 No 33 83.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32966244 + NM_000059 BRCA2 0 . . . 4.33 73.54 29 6.42 Yes 1 0.25 No 0 0 No -27 0.56 No 46 80.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108209455 + NM_000051 ATM 0 . . . 1.85 69.89 39 7.17 Yes 33 0.8 Yes 0 0 No -42 0.39 No 38 56.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56805003 + NM_058216 RAD51C 0 . . . 4.04 70.91 39 6.13 Yes 34 0.43 No 0 0 No -28 0.5 No 42 81.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94170516 - NM_005591 MRE11 0 . . . 1.92 0 17 4.78 No 38 0.67 No 0 0 No -21 0.48 No 49 46.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68338689 + NM_133509 RAD51B 0 . . . 3.18 67.22 19 5.94 Yes 44 -4.46 No 0 0 No -18 0.62 No 44 43.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90950594 - NM_002485 NBN 0 . . . 2.95 69.52 14 4.7 No 1 0.04 No 0 0 No -50 0.45 No 57 58.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68876666 + NM_133509 RAD51B 0 . . . 6.31 86.49 35 6.78 Yes 15 1.13 Yes 0 0 No -34 0.91 Yes 37 93.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47800433 + NM_000251 MSH2 0 . . . 2.87 61.55 31 6.31 Yes 2 0.15 No 0 0 No -30 0.94 Yes 33 60.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190669485 + NM_000534 PMS1 0 . . . 2.02 0 21 5.08 No 9 0.24 No 0 0 No -20 0.67 Yes 39 66.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68817633 + NM_133509 RAD51B 0 . . . 1.68 58.07 17 4.69 No 49 0.93 Yes 0 0 No -25 0.54 No 47 32.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59766542 - NM_032043 BRIP1 0 . . . 2.27 68.39 21 4.62 No 47 0.63 No 0 0 No -20 0.81 Yes 42 59.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47701740 + NM_000251 MSH2 0 . . . 2.34 81.08 25 5.48 No 57 0.46 No 0 0 No -23 0.47 No 44 80.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68348018 + NM_133509 RAD51B 0 . . . 0.97 69.87 15 5.13 No 48 0.98 Yes 0 0 No -21 0.79 Yes 33 67.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21977675 - NM_000077 CDKN2A 0 . . . 4.37 68.58 43 6.07 Yes 74 0.78 Yes 0 0 No -42 0.67 Yes 32 81.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190679310 + NM_000534 PMS1 0 . . . 1.37 0 29 5.27 No 22 0.46 No 0 0 No -28 0.69 Yes 27 49.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6027286 - NM_000535 PMS2 0 . . . 0.18 0 24 5.06 No 21 0.42 No 28 0.93 Yes -21 0.46 No 37 86.15 Yes BPP: No, SVM: No, Branch: Yes, LB: No, RNABPS: Yes chr14 68425892 + NM_133509 RAD51B 0 . . . 0.85 67.33 24 6.05 Yes 0 0.67 No 0 0 No -23 0.69 Yes 41 48.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23618985 - NM_024675 PALB2 0 . . . 4.71 71.82 22 4.8 No -1 0.49 No 0 0 No -21 0.57 No 37 48.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41020159 + NM_001164269 RAD51 0 . . . 3.37 66.46 31 4.74 No 59 1.3 Yes 0 0 No -30 0.45 No 42 93.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68650265 + NM_133509 RAD51B 0 . . . 4.54 86.78 40 6.24 Yes 57 1.77 Yes 0 0 No -33 0.81 Yes 45 44.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68792146 + NM_133509 RAD51B 0 . . . 3.26 0 14 4.72 No 52 0.11 No 0 0 No -23 0.56 No 38 35.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37058616 + NM_000249 MLH1 0 . . . 4.69 83.28 16 5.38 No 65 -3.7 No 0 0 No -25 0.39 No 50 94.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190696528 + NM_000534 PMS1 0 . . . 5.96 84.59 21 4.8 No 68 -3.02 No 0 0 No -45 0.33 No 38 84.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41272915 - NM_007294 BRCA1 0 . . . 1.87 80.12 58 7.63 Yes 6 1.13 Yes 0 0 No -26 0.46 No 52 71.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29130895 - NM_001005735 CHEK2 0 . . . 0.02 56.63 23 7.48 Yes 69 1.06 Yes 0 0 No -22 0.82 Yes 51 30.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68645387 + NM_133509 RAD51B 0 . . . 5.48 82.92 20 4.84 No 0 0.94 Yes 0 0 No -12 0.42 No 49 87.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59937004 - NM_032043 BRIP1 0 . . . 0.74 66.73 19 4.9 No 44 1.66 Yes 0 0 No -18 0.47 No 45 38.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32935356 + NM_000059 BRCA2 0 . . . 3.08 66.78 26 4.55 No 70 -5.61 No 0 0 No -25 0.94 Yes 42 22.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56799512 + NM_058216 RAD51C 0 . . . 1.33 0 23 5 No 9 0.3 No 0 0 No -22 0.42 No 49 38.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190652255 + NM_000534 PMS1 0 . . . 7.45 77.55 25 6 Yes 23 0.41 No 0 0 No -24 0.96 Yes 46 78.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41204163 - NM_007294 BRCA1 0 . . . 1.74 79.88 28 5.21 No 51 0.97 Yes 0 0 No -27 0.67 Yes 46 66.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108122675 + NM_000051 ATM 0 . . . 2.43 87.17 28 5.2 No 69 -2.11 No 0 0 No -27 0.9 Yes 49 56.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45801125 - NM_001048171 MUTYH 0 . . . 7.06 88.92 26 5.04 No 12 0.08 No 0 0 No -25 0.49 No 46 77.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33426943 - NM_002878 RAD51D 0 . . . 0.77 0 23 6.47 Yes 18 0.73 No 0 0 No -22 0.79 Yes 40 79.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131960156 + NM_005732 RAD50 0 . . . 2.84 0 16 4.89 No 51 1.22 Yes 0 0 No -22 0.76 Yes 25 52.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68507289 + NM_133509 RAD51B 0 . . . 1.5 63.97 30 3.64 No 65 0.36 No 0 0 No -29 0.91 Yes 28 74.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68831404 + NM_133509 RAD51B 0 . . . 1.39 63.97 18 4.72 No 17 0.58 No 0 0 No -24 0.38 No 41 53.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89663449 + NM_000314 PTEN 0 . . . 2.3 68.95 17 4.58 No 13 0.42 No 0 0 No -56 0.67 Yes 45 73.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105208896 + NM_021930 RINT1 0 . . . 1.55 73.15 67 6.58 Yes 46 0.79 Yes 0 0 No -26 0.53 No 47 59.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921005 + NM_133509 RAD51B 0 . . . 0.86 76.82 19 3.62 No 31 0.72 No 0 0 No -23 0.39 No 52 89.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131909794 + NM_005732 RAD50 0 . . . 0.72 0 27 6.84 Yes 1 0.18 No 0 0 No -26 0.62 No 57 67.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32912280 + NM_000059 BRCA2 0 . . . 0.26 0 29 5.9 Yes 2 0.39 No 0 0 No -28 0.72 Yes 48 87.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68706015 + NM_133509 RAD51B 0 . . . 0.21 68.06 19 4.32 No 19 2.11 Yes 0 0 No -29 0.71 Yes 23 87.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89674169 + NM_000314 PTEN 0 . . . 2.94 76.24 38 7.75 Yes 51 0.81 Yes 0 0 No -32 0.73 Yes 38 60.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68472235 + NM_133509 RAD51B 0 . . . 4.5 72.37 20 5.57 Yes 55 -4.17 No 0 0 No -19 0.62 No 47 86.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215655362 - NM_000465 BARD1 0 . . . 3.64 78.06 27 9.53 Yes 5 1.04 Yes 0 0 No -26 0.94 Yes 47 86.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69142831 + NM_133509 RAD51B 0 . . . 2.28 77.31 15 5.48 No 74 1.13 Yes 0 0 No -46 0.48 No 52 58.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68549748 + NM_133509 RAD51B 0 . . . 3.79 81.89 18 7.25 Yes -4 0.29 No 0 0 No -21 0.69 Yes 37 53.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69068133 + NM_133509 RAD51B 0 . . . 5 70.91 12 4.24 No 75 1.68 Yes 0 0 No -29 0.92 Yes 49 65.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29137770 - NM_001005735 CHEK2 0 . . . 1.55 79.89 27 5.57 Yes 59 0.09 No 0 0 No -26 0.9 Yes 22 31.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68476184 + NM_133509 RAD51B 0 . . . 0.99 79.85 25 6.6 Yes 61 1.34 Yes 0 0 No -24 0.67 Yes 12 64.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190734082 + NM_000534 PMS1 0 . . . 5.49 74.1 13 5 No 51 1.67 Yes 0 0 No -28 0.41 No 55 40.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69025819 + NM_133509 RAD51B 0 . . . 4.99 73.06 20 7.14 Yes 38 1 Yes 0 0 No -19 0.75 Yes 37 38.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90982630 - NM_002485 NBN 0 . . . 2.97 81.54 25 6.24 Yes -4 1.1 Yes 0 0 No -24 0.73 Yes 45 97.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45802862 - NM_001048171 MUTYH 0 . . . 0.94 76.63 24 5.1 No 40 -3.05 No 0 0 No -23 0.89 Yes 53 44.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32948305 + NM_000059 BRCA2 0 . . . 0.16 68.64 26 5.1 No 69 -6.22 No 0 0 No -21 0.68 Yes 44 73.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89647583 + NM_000314 PTEN 0 . . . 1.33 0 22 5.54 No 40 0.7 No 0 0 No -21 0.39 No 33 64.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47746761 + NM_000251 MSH2 0 . . . 2.31 79.03 30 6.47 Yes 68 0.16 No 0 0 No -29 0.49 No 45 46.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89630209 + NM_000314 PTEN 0 . . . 2.05 62.78 29 5.06 No 67 -3.11 No 0 0 No -28 0.95 Yes 39 56.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68371815 + NM_133509 RAD51B 0 . . . 1.42 65.55 36 5.92 Yes 44 0.01 No 0 0 No -33 0.66 No 45 56.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68571359 + NM_133509 RAD51B 0 . . . 2.32 70.39 27 4.28 No 41 0.5 No 0 0 No -26 0.75 Yes 49 62.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68779217 + NM_133509 RAD51B 0 . . . 1.71 0 60 6.51 Yes 11 1.67 Yes 0 0 No -54 0.46 No 47 58.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37058563 + NM_000249 MLH1 0 . . . 3.45 64.97 25 5.39 No 62 -2.66 No 0 0 No -24 0.63 No 49 54.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52437052 - NM_004656 BAP1 0 . . . 0.08 71.35 18 5.48 No 38 1.17 Yes 0 0 No -17 0.59 No 50 69.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190708248 + NM_000534 PMS1 0 . . . 1.99 65.55 10 3.87 No 15 1.08 Yes 0 0 No -50 0.68 Yes 43 69.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37043976 + NM_000249 MLH1 0 . . . 1.63 68.97 26 4.73 No 32 0.22 No 0 0 No -20 0.85 Yes 12 33.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32944765 + NM_000059 BRCA2 0 . . . 1.87 82.92 20 4.62 No 37 0.71 No 0 0 No -32 0.5 No 47 51.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68477690 + NM_133509 RAD51B 0 . . . 0.28 0 41 7.84 Yes 32 0.15 No 0 0 No -40 0.46 No 26 40.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32938673 + NM_000059 BRCA2 0 . . . 5.95 79.87 21 5.64 Yes 47 0.47 No 0 0 No -20 0.67 Yes 27 90.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47664059 + NM_000251 MSH2 0 . . . 3.93 74.1 34 8.36 Yes 37 -4.18 No 0 0 No -33 0.73 Yes 48 79.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131940921 + NM_005732 RAD50 0 . . . 3.44 83.8 16 5.29 No 7 1.22 Yes 0 0 No -46 0.31 No 51 86.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32909340 + NM_000059 BRCA2 0 . . . 1.19 66.91 17 6.85 Yes 26 0.69 No 0 0 No -26 0.67 Yes 32 33.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152362259 - NM_005431 XRCC2 0 . . . 0.17 76.29 20 3.99 No 3 1.28 Yes 0 0 No -19 0.41 No 55 35.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29130639 - NM_001005735 CHEK2 0 . . . 0.38 0 17 3.49 No 22 0.56 No 0 0 No -19 0.61 No 36 89.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33446082 - NM_002878 RAD51D 0 . . . 3.16 72.6 20 7.03 Yes 25 1.41 Yes 0 0 No -19 0.48 No 47 56.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68583681 + NM_133509 RAD51B 0 . . . 5.44 74.36 42 7.96 Yes 17 1.23 Yes 0 0 No -33 0.51 No 41 84.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190738520 + NM_000534 PMS1 0 . . . 8.09 84.05 73 8.72 Yes 6 0.95 Yes 0 0 No -22 0.52 No 52 69.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89662218 + NM_000314 PTEN 0 . . . 2.71 67.05 10 4.69 No 33 0.48 No 0 0 No -19 0.42 No 38 89.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152360295 - NM_005431 XRCC2 0 . . . 6.35 82.65 21 5 No 52 1.45 Yes 0 0 No -21 0.68 Yes 45 82.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68902990 + NM_133509 RAD51B 0 . . . 2.4 70.46 21 4.58 No 74 0.3 No 0 0 No -20 0.6 No 46 53.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68301060 + NM_133509 RAD51B 0 . . . 2.89 70.3 28 6.7 Yes 52 0.42 No 0 0 No -27 0.75 Yes 36 64.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190649029 + NM_000534 PMS1 0 . . . 0.77 76.69 29 7.68 Yes 25 1.38 Yes 0 0 No -28 0.95 Yes 33 49.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40989263 + NM_001164269 RAD51 0 . . . 2.45 71.19 29 4.83 No 48 1.29 Yes 0 0 No -28 0.58 No 48 74.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47633350 + NM_000251 MSH2 0 . . . 3.06 66.46 35 6.4 Yes 16 1.14 Yes 0 0 No -34 0.78 Yes 42 92.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190742897 + NM_000534 PMS1 0 . . . 3.6 85.02 14 5.36 No 4 1.2 Yes 0 0 No -24 0.45 No 43 60.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68374272 + NM_133509 RAD51B 0 . . . 5.83 72.54 30 5.21 No 2 0.94 Yes 0 0 No -23 0.49 No 42 65.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33444555 - NM_002878 RAD51D 0 . . . 0.09 76.63 13 4.36 No 40 -3.15 No 0 0 No -30 0.38 No 50 40.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37043235 + NM_000249 MLH1 0 . . . 1.05 73.57 16 4.69 No 21 0.66 No 0 0 No -36 0.66 No 37 70.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68558531 + NM_133509 RAD51B 0 . . . 5.46 0 26 5.65 Yes 15 0.23 No 0 0 No -25 0.95 Yes 49 57.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94190295 - NM_005591 MRE11 0 . . . 4.65 80.39 15 4.58 No 72 1.16 Yes 0 0 No -57 0.55 No 51 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68820788 + NM_133509 RAD51B 0 . . . 0.62 78.26 23 5.21 No 54 0.86 Yes 0 0 No -22 0.88 Yes 47 57.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68708450 + NM_133509 RAD51B 0 . . . 6.21 74.49 74 7.61 Yes 59 0.66 No 0 0 No -45 0.68 Yes 32 54.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21976294 - NM_000077 CDKN2A 0 . . . 3.17 66.46 23 6.32 Yes 59 0.92 Yes 0 0 No -22 0.81 Yes 42 85.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68315827 + NM_133509 RAD51B 0 . . . 3.61 73.75 58 6.18 Yes 68 1.17 Yes 0 0 No -48 0.51 No 46 68.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68631674 + NM_133509 RAD51B 0 . . . 0.42 68.13 27 5.01 No 12 -1.38 No 0 0 No -26 0.83 Yes 47 80.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47779966 + NM_000251 MSH2 0 . . . 3.69 72.96 24 4.17 No 3 0.65 No 0 0 No -9 0.56 No 49 48.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108101730 + NM_000051 ATM 0 . . . 1.53 76.73 21 4.63 No 61 1.62 Yes 0 0 No -20 0.37 No 51 33.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215656586 - NM_000465 BARD1 0 . . . 4.14 74.61 21 4.58 No 63 1.29 Yes 0 0 No -30 0.46 No 43 41.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32933728 + NM_000059 BRCA2 0 . . . 6.26 67.62 28 5.28 No 34 0.87 Yes 0 0 No -27 0.82 Yes 33 90.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7575302 - NM_000546 TP53 0 . . . 1.36 65.93 17 4.25 No 7 0.98 Yes 0 0 No -20 0.87 Yes 25 57.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23632366 - NM_024675 PALB2 0 . . . 6.74 83.82 17 5.63 Yes 5 1.09 Yes 0 0 No -26 0.35 No 53 75.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68849772 + NM_004360 CDH1 0 . . . 3.39 75.25 16 4.81 No 74 0.65 No 0 0 No -20 0.76 Yes 42 83.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89703916 + NM_000314 PTEN 0 . . . 1.36 69.37 25 5.41 No 62 -5.48 No 0 0 No -24 0.72 Yes 50 93.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69117201 + NM_133509 RAD51B 0 . . . 0.94 69.23 38 7.16 Yes 29 0.65 No 0 0 No -26 0.7 Yes 52 52.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59811080 - NM_032043 BRIP1 0 . . . 5.07 75.01 31 5.66 Yes 9 0.79 Yes 0 0 No -30 0.66 No 44 88.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152367637 - NM_005431 XRCC2 0 . . . 4.35 73.06 49 7.4 Yes 2 0.58 No 0 0 No -48 0.55 No 40 43.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32960093 + NM_000059 BRCA2 0 . . . 0.18 68.2 30 5.83 Yes 75 0.14 No 0 0 No -29 0.82 Yes 36 26.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32947979 + NM_000059 BRCA2 0 . . . 9.49 87.45 21 5.02 No 71 0.49 No 0 0 No -20 0.49 No 49 83.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68859630 + NM_004360 CDH1 0 . . . 5.8 71.75 20 5.57 Yes 16 1.19 Yes 0 0 No -19 0.59 No 44 65.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190706536 + NM_000534 PMS1 0 . . . 3.05 73.09 25 4.63 No 75 -6.65 No 0 0 No -9 0.49 No 46 67.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75516759 - NM_001040108 MLH3 0 . . . 1.77 72.34 9 3.87 No -1 1.49 Yes 0 0 No -35 0.69 Yes 41 43.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68483700 + NM_133509 RAD51B 0 . . . 1.02 65.14 31 5.25 No 59 -5.64 No 0 0 No -26 0.68 Yes 40 38.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75508811 - NM_001040108 MLH3 0 . . . 6.77 81.05 25 5 No 16 -1 No 0 0 No -24 0.86 Yes 39 56.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68323149 + NM_133509 RAD51B 0 . . . 5.31 73.38 27 5.28 No 68 1.07 Yes 0 0 No -26 0.81 Yes 48 77.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108137545 + NM_000051 ATM 0 . . . 3.01 0 34 7.08 Yes 19 0.73 No 0 0 No -33 0.7 Yes 40 43.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59892463 - NM_032043 BRIP1 0 . . . 1.34 0 33 4.64 No 24 0.1 No 0 0 No -27 0.88 Yes 34 96.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68665050 + NM_133509 RAD51B 0 . . . 5.18 77.8 20 5.57 Yes 53 1.82 Yes 0 0 No -19 0.73 Yes 48 70.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68367383 + NM_133509 RAD51B 0 . . . 2.8 76.7 46 7.12 Yes 75 0.56 No 0 0 No -34 0.62 No 44 48.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90983289 - NM_002485 NBN 0 . . . 2.02 70.25 49 9.1 Yes 19 1.46 Yes 0 0 No -48 0.69 Yes 39 92.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68804317 + NM_133509 RAD51B 0 . . . 5.19 79.53 26 8.1 Yes 61 1.29 Yes 0 0 No -25 0.97 Yes 41 51.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68498641 + NM_133509 RAD51B 0 . . . 8.63 71.57 52 6.94 Yes 15 0.93 Yes 0 0 No -37 0.89 Yes 43 59.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89726859 + NM_000314 PTEN 0 . . . 1.05 69.55 69 7.4 Yes 74 -5.98 No 0 0 No -30 0.57 No 48 66.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131922166 + NM_005732 RAD50 0 . . . 6.35 81.18 20 7.14 Yes 37 1.46 Yes 0 0 No -19 0.75 Yes 42 34.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68417266 + NM_133509 RAD51B 0 . . . 6.04 82.01 29 6.19 Yes 38 0.35 No 0 0 No -28 0.97 Yes 44 67.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89716059 + NM_000314 PTEN 0 . . . 2.13 69.31 22 5.29 No 63 -4.4 No 0 0 No -21 0.7 Yes 47 70.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29100051 - NM_001005735 CHEK2 0 . . . 0.73 67.42 28 5.38 No 7 -1.4 No 0 0 No -23 0.62 No 60 45.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68679355 + NM_133509 RAD51B 0 . . . 0.48 71.69 22 5.17 No 35 0.39 No 0 0 No -21 0.56 No 50 75.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37060065 + NM_000249 MLH1 0 . . . 4.13 77.11 37 6.83 Yes 38 1.27 Yes 0 0 No -24 0.59 No 41 84.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68809114 + NM_133509 RAD51B 0 . . . 10.49 84 24 5.48 No 30 1.77 Yes 0 0 No -23 0.83 Yes 32 84.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90971919 - NM_002485 NBN 0 . . . 4.59 79.73 19 5.39 No 2 0.72 No 0 0 No -18 0.46 No 45 69.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89652246 + NM_000314 PTEN 0 . . . 2.23 71.77 13 4.36 No 67 1.21 Yes 0 0 No -30 0.83 Yes 38 79.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47780389 + NM_000251 MSH2 0 . . . 1.22 66.29 37 6.24 Yes 53 0.85 Yes 0 0 No -36 0.53 No 48 71.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108135620 + NM_000051 ATM 0 . . . 2.39 71.8 18 5.38 No 14 0.6 No 0 0 No -17 0.65 No 44 49.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68294066 + NM_133509 RAD51B 0 . . . 6.05 79.37 19 4.43 No 14 0.63 No 0 0 No -18 0.53 No 37 75.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68762458 + NM_133509 RAD51B 0 . . . 6.31 81.18 16 3.62 No 69 0.47 No 0 0 No -19 0.8 Yes 42 82.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68820885 + NM_004360 CDH1 0 . . . 7.88 84.6 13 4.36 No 5 1.27 Yes 0 0 No -25 0.56 No 53 54.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29086261 - NM_001005735 CHEK2 0 . . . 0.03 74.11 25 5.29 No 60 1.28 Yes 0 0 No -24 0.87 Yes 20 74.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68708745 + NM_133509 RAD51B 0 . . . 1.03 74.22 38 5.48 No 39 0.23 No 0 0 No -31 0.44 No 52 83.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47713955 + NM_000251 MSH2 0 . . . 0.41 68.61 13 4.24 No 5 1.02 Yes 0 0 No -28 0.49 No 41 83.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68347694 + NM_133509 RAD51B 0 . . . 2.01 73.85 21 5.83 Yes 66 0.68 No 0 0 No -27 0.29 No 47 60.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75484764 - NM_001040108 MLH3 0 . . . 2.71 66.46 37 6.56 Yes 16 1.42 Yes 0 0 No -36 0.74 Yes 42 95.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68878770 + NM_133509 RAD51B 0 . . . 5.41 80.59 17 5.29 No 65 -4.3 No 0 0 No -16 0.47 No 48 44.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105173364 + NM_021930 RINT1 0 . . . 2.57 66.43 28 5.57 Yes 14 0.16 No 0 0 No -32 0.85 Yes 44 70.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68695409 + NM_133509 RAD51B 0 . . . 3.56 79.62 20 5.1 No 67 0.13 No 0 0 No -24 0.72 Yes 50 66.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68801903 + NM_004360 CDH1 0 . . . 5.55 90.92 22 5.55 No 31 0.67 No 0 0 No -25 0.32 No 24 47.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90945994 - NM_002485 NBN 0 . . . 2.96 73.69 26 5.08 No 18 1.43 Yes 0 0 No -20 0.77 Yes 40 91.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68506953 + NM_133509 RAD51B 0 . . . 5.51 77.53 35 5.77 Yes 70 -4.36 No 0 0 No -34 0.72 Yes 39 46.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23650499 - NM_024675 PALB2 0 . . . 4 72.4 40 6.83 Yes 7 0.82 Yes 0 0 No -20 0.46 No 36 48.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37036934 + NM_000249 MLH1 0 . . . 3.49 82.51 10 5.29 No 73 1.5 Yes 0 0 No -21 0.71 Yes 49 72.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69012797 + NM_133509 RAD51B 0 . . . 3.99 78.87 23 4.9 No 56 0.3 No 0 0 No -22 0.9 Yes 45 72.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23614731 - NM_024675 PALB2 0 . . . 0.93 68.21 29 7.75 Yes 34 -2.25 No 0 0 No -28 0.94 Yes 40 58.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89726792 + NM_000314 PTEN 0 . . . 2.06 80.16 33 6.24 Yes 20 -2.51 No 0 0 No -32 0.89 Yes 38 71.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131961194 + NM_005732 RAD50 0 . . . 1.74 72.16 25 5.57 Yes 66 -1.7 No 0 0 No -24 0.72 Yes 49 32.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131931575 + NM_005732 RAD50 0 . . . 8.17 75.87 57 9.05 Yes 15 0.22 No 0 0 No -36 0.38 No 42 76.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75493074 - NM_001040108 MLH3 0 . . . 5.92 92.7 21 6.14 Yes 71 1.28 Yes 0 0 No -20 0.8 Yes 47 90.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1219675 + NM_000455 STK11 0 . . . 0.05 0 60 7.74 Yes 20 1.2 Yes 0 0 No -27 0.47 No 38 74.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68387344 + NM_133509 RAD51B 0 . . . 0.96 66.04 17 4.8 No 11 0.64 No 0 0 No -44 0.36 No 47 88.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68572599 + NM_133509 RAD51B 0 . . . 3.78 66.66 48 5.6 Yes 28 0.56 No 0 0 No -23 0.31 No 30 81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68866327 + NM_133509 RAD51B 0 . . . 5.92 73.79 18 4.9 No 26 1.45 Yes 0 0 No -22 0.54 No 44 81.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75508035 - NM_001040108 MLH3 0 . . . 7.53 79.91 21 5.2 No 2 2.01 Yes 0 0 No -24 0.83 Yes 56 65.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37088708 + NM_000249 MLH1 0 . . . 9.08 78.56 16 5.48 No 60 0.93 Yes 0 0 No -23 0.77 Yes 50 38.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32944114 + NM_000059 BRCA2 0 . . . 3.12 81.97 29 4.74 No 25 0.28 No 0 0 No -28 0.66 No 52 46.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215590471 - NM_000465 BARD1 0 . . . 7.43 84.38 54 7.17 Yes 34 1.69 Yes 0 0 No -22 0.53 No 47 64.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59929916 - NM_032043 BRIP1 0 . . . 1.35 63.4 16 4.69 No 20 0.6 No 0 0 No -18 0.4 No 38 78.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108199655 + NM_000051 ATM 0 . . . 0.61 63.45 36 5.21 No 1 -1.89 No 0 0 No -27 0.68 Yes 46 90.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69129991 + NM_133509 RAD51B 0 . . . 0.24 77.69 23 4.8 No 68 -5.02 No 0 0 No -22 0.9 Yes 48 66.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108163892 + NM_000051 ATM 0 . . . 0.28 70.25 73 9.35 Yes 48 0.91 Yes 0 0 No -27 0.88 Yes 40 91.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56768085 + NM_058216 RAD51C 0 . . . 1.82 73.41 10 5 No 67 -5.35 No 0 0 No -21 0.66 Yes 46 82.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68371532 + NM_133509 RAD51B 0 . . . 0.55 67.55 28 6.37 Yes 49 0.87 Yes 0 0 No -27 0.88 Yes 35 43.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68918035 + NM_133509 RAD51B 0 . . . 2.68 70.57 22 6.53 Yes 10 0.61 No 0 0 No -21 0.93 Yes 48 68.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68608607 + NM_133509 RAD51B 0 . . . 1.05 0 20 4.93 No 51 2.17 Yes 0 0 No -19 0.84 Yes 36 73.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89627442 + NM_000314 PTEN 0 . . . 1.94 84.94 60 7.64 Yes 62 -3.32 No 0 0 No -27 0.63 No 43 40.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68519775 + NM_133509 RAD51B 0 . . . 8.87 88.93 35 6.17 Yes 17 0.54 No 0 0 No -35 0.72 Yes 41 71.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68861168 + NM_133509 RAD51B 0 . . . 0.77 59.07 15 5.48 No 71 -4.36 No 0 0 No -25 0.57 No 40 49.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47722394 + NM_000251 MSH2 0 . . . 3.81 80.53 13 5.57 Yes 4 0.29 No 0 0 No -24 0.83 Yes 38 71.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68357621 + NM_133509 RAD51B 0 . . . 0.66 67.9 26 5.16 No 39 1.18 Yes 0 0 No -25 0.79 Yes 27 84.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59918475 - NM_032043 BRIP1 0 . . . 7.81 83.42 26 5.35 No 15 1.22 Yes 0 0 No -25 0.69 Yes 43 82.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131891470 + NM_005732 RAD50 0 . . . 3.5 68.34 21 4.65 No 21 1.71 Yes 0 0 No -21 0.76 Yes 37 78.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68820193 + NM_004360 CDH1 0 . . . 1.08 84.22 34 6.24 Yes 33 1.15 Yes 0 0 No -33 0.84 Yes 25 63.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47731643 + NM_000251 MSH2 0 . . . 2.59 64.6 24 5.48 No 73 0.94 Yes 0 0 No -23 0.67 Yes 42 40.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68849231 + NM_004360 CDH1 0 . . . 7.11 82.07 15 5.95 Yes 33 0.28 No 0 0 No -23 0.42 No 47 66.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69089405 + NM_133509 RAD51B 0 . . . 4.75 86.32 36 6.32 Yes 67 0.6 No 0 0 No -33 0.4 No 49 84.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68902964 + NM_133509 RAD51B 0 . . . 3.84 74.94 103 10.14 Yes 48 0.31 No 0 0 No -22 0.85 Yes 40 58.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108235917 + NM_000051 ATM 0 . . . 6.74 79.01 29 4.38 No 12 1.03 Yes 0 0 No -23 0.57 No 46 70.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75501739 - NM_001040108 MLH3 0 . . . 5.67 84.17 16 4.89 No 61 1.39 Yes 0 0 No -20 0.74 Yes 17 82.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68775529 + NM_004360 CDH1 0 . . . 6.07 86.15 18 5.52 No 34 1.82 Yes 0 0 No -17 0.43 No 37 85.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90984484 - NM_002485 NBN 0 . . . 3.81 60.44 28 7 Yes 8 1.48 Yes 0 0 No -27 0.82 Yes 40 38.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68628711 + NM_133509 RAD51B 0 . . . 4.45 77.24 17 4.74 No 60 -4.14 No 0 0 No -35 0.36 No 50 36.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190715738 + NM_000534 PMS1 0 . . . 0.26 75.86 44 6.28 Yes 36 0.03 No 0 0 No -31 0.52 No 22 48.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29136022 - NM_001005735 CHEK2 0 . . . 0.6 77.86 30 5.37 No 7 0.7 No 0 0 No -26 0.37 No 51 76.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37066969 + NM_000249 MLH1 0 . . . 4.53 71.57 21 4.9 No 16 0.89 Yes 0 0 No -20 0.81 Yes 35 40.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68875901 + NM_133509 RAD51B 0 . . . 3.63 72.46 15 5.29 No 69 0.93 Yes 0 0 No -55 0.63 No 52 61.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32934541 + NM_000059 BRCA2 0 . . . 3.49 84.51 15 4.83 No 23 1.64 Yes 0 0 No -58 0.72 Yes 46 69.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131980184 + NM_005732 RAD50 0 . . . 0.6 66.47 28 4.72 No 31 0.55 No 0 0 No -27 0.82 Yes 30 67.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41243452 - NM_007294 BRCA1 0 . . . 2.19 65.38 59 8.26 Yes 59 -5.02 No 0 0 No -21 0.64 No 54 30.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68613047 + NM_133509 RAD51B 0 . . . 3.58 66.96 30 7.46 Yes 47 0.63 No 0 0 No -25 0.55 No 43 44.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68594567 + NM_133509 RAD51B 0 . . . 1.11 65.3 27 5.65 Yes 17 0.66 No 0 0 No -26 0.87 Yes 48 50.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215656894 - NM_000465 BARD1 0 . . . 4.86 78.2 21 4.33 No 66 0.91 Yes 0 0 No -20 0.77 Yes 47 64.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32965563 + NM_000059 BRCA2 0 . . . 7.06 85.77 16 5.08 No 41 -2.4 No 0 0 No -20 0.64 No 46 56.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131897368 + NM_005732 RAD50 0 . . . 0.07 65.36 54 6.75 Yes 22 2.09 Yes 0 0 No -30 0.87 Yes 49 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68660814 + NM_133509 RAD51B 0 . . . 2.09 0 27 5.74 Yes 52 0.53 No 0 0 No -26 0.92 Yes 39 85.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47744860 + NM_000251 MSH2 0 . . . 0.46 82.5 27 7.58 Yes 25 1.76 Yes 0 0 No -37 0.62 No 24 67.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104174799 - NM_001100119 XRCC3 0 . . . 0.44 73.22 29 5.68 Yes 16 -0.94 No 0 0 No -28 0.7 Yes 42 43.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90990870 - NM_002485 NBN 0 . . . 1.17 65.46 27 5.52 No 67 1.15 Yes 0 0 No -23 0.48 No 36 45.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29106160 - NM_001005735 CHEK2 0 . . . 2.69 73.34 17 5.76 Yes 18 1.46 Yes 0 0 No -27 0.5 No 40 70.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108096382 + NM_000051 ATM 0 . . . 4.04 85.02 23 4.61 No 4 0.6 No 0 0 No -23 0.89 Yes 43 67.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89664636 + NM_000314 PTEN 0 . . . 2.3 73.47 27 4.61 No 35 1.12 Yes 0 0 No -26 0.63 No 42 82.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215592404 - NM_000465 BARD1 0 . . . 3.32 0 33 7.63 Yes 45 -4.07 No 0 0 No -32 0.64 No 52 83.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37078374 + NM_000249 MLH1 0 . . . 0.47 0 23 5.27 No 52 1.68 Yes 0 0 No -28 0.79 Yes 50 87.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1215920 + NM_000455 STK11 0 . . . 2.24 80.12 13 6.63 Yes 7 1.16 Yes 0 0 No -25 0.35 No 51 78.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108203453 + NM_000051 ATM 0 . . . 0.61 59.4 14 5.13 No 42 0.49 No 29 0.88 Yes -23 0.53 No 13 61.81 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 75508017 - NM_001040108 MLH3 0 . . . 0.74 80.37 20 4.26 No 20 2.02 Yes 0 0 No -19 0.52 No 50 50.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131942020 + NM_005732 RAD50 0 . . . 1.63 68.82 23 4.69 No 23 0.13 No 0 0 No -22 0.62 No 47 42.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59879005 - NM_032043 BRIP1 0 . . . 2.32 73.12 20 5.1 No 65 -1.88 No 0 0 No -19 0.73 Yes 46 64.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32958771 + NM_000059 BRCA2 0 . . . 4.16 75.09 12 4.5 No -1 0.29 No 0 0 No -27 0.33 No 44 36.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59795902 - NM_032043 BRIP1 0 . . . 0.65 0 35 5.82 Yes NA NA NA 0 0 No -34 0.51 No 50 35.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68769815 + NM_004360 CDH1 0 . . . 2.89 68.34 12 3.96 No 21 1.71 Yes 0 0 No -28 0.37 No 37 76.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69061382 + NM_133509 RAD51B 0 . . . 0.27 74.83 44 6.52 Yes 59 1.06 Yes 0 0 No -26 0.84 Yes 48 88.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90968494 - NM_002485 NBN 0 . . . 0.72 79.95 14 4.47 No 48 0.91 Yes 0 0 No -25 0.37 No 47 81.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68828785 + NM_133509 RAD51B 0 . . . 1.6 70.25 16 5.05 No 42 0.57 No 0 0 No -20 0.61 No 47 62.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68784984 + NM_133509 RAD51B 0 . . . 0.68 63.37 36 7.77 Yes 0 0.7 No 0 0 No -35 0.7 Yes 58 42.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89730445 + NM_000314 PTEN 0 . . . 0.86 72.91 12 5.47 No -3 0.07 No 0 0 No -27 0.35 No 48 41.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68376476 + NM_133509 RAD51B 0 . . . 2.59 76.09 17 4.59 No 46 -0.48 No 0 0 No -26 0.36 No 50 64.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75485879 - NM_001040108 MLH3 0 . . . 2.35 80.37 35 6.06 Yes 11 1.64 Yes 0 0 No -21 0.45 No 47 54.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48013932 + NM_000179 MSH6 0 . . . 4.63 80.46 35 6.32 Yes 3 0.49 No 0 0 No -34 0.58 No 49 84.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68297543 + NM_133509 RAD51B 0 . . . 1.03 0 25 5.36 No 32 1.8 Yes 0 0 No -22 0.77 Yes 46 63.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68712880 + NM_133509 RAD51B 0 . . . 4.19 73.72 22 4.85 No 1 1.04 Yes 0 0 No -21 0.61 No 42 47.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68981863 + NM_133509 RAD51B 0 . . . 2.92 81.95 13 4.12 No 1 0.56 No 0 0 No -25 0.59 No 43 85.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69078077 + NM_133509 RAD51B 0 . . . 0.73 0 39 6.13 Yes 28 0.69 No 0 0 No -31 0.75 Yes 37 43.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89690068 + NM_000314 PTEN 0 . . . 4.85 71.75 14 4.47 No 28 1.25 Yes 0 0 No -31 0.57 No 48 43.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68615993 + NM_133509 RAD51B 0 . . . 0.32 62.48 9 4.58 No 47 1.67 Yes 0 0 No -39 0.31 No 42 83.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68780094 + NM_133509 RAD51B 0 . . . 2 75.89 12 4.85 No 24 1.13 Yes 0 0 No -23 0.82 Yes 46 80.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69089661 + NM_133509 RAD51B 0 . . . 0.31 71.11 19 4.78 No 29 -1.9 No 0 0 No -31 0.58 No 53 24.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105197406 + NM_021930 RINT1 0 . . . 6.68 88.28 23 5.54 No 68 0.25 No 0 0 No -23 0.62 No 50 63.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152354237 - NM_005431 XRCC2 0 . . . 2.81 68.36 31 5.76 Yes 59 1.45 Yes 0 0 No -30 0.67 Yes 42 93.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68662139 + NM_133509 RAD51B 0 . . . 6.03 77.72 23 4.8 No 1 2.03 Yes 0 0 No -22 0.78 Yes 49 71.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41019551 + NM_001164269 RAD51 0 . . . 5.42 84.17 35 6.38 Yes 65 0.53 No 0 0 No -34 0.64 No 44 56.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47733689 + NM_000251 MSH2 0 . . . 4.14 77.05 24 5.35 No 8 0.58 No 0 0 No -23 0.55 No 39 53.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52433220 - NM_004656 BAP1 0 . . . 6.19 75.44 17 5.66 Yes 51 0.53 No 0 0 No -36 0.65 No 48 86.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152368553 - NM_005431 XRCC2 0 . . . 5.02 75.95 42 7.31 Yes 69 -5.41 No 0 0 No -41 0.5 No 41 58.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215599957 - NM_000465 BARD1 0 . . . 2.07 73.76 17 5.48 No 57 1.35 Yes 0 0 No -42 0.68 Yes 38 70.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68885007 + NM_133509 RAD51B 0 . . . 6.3 91.79 40 6.63 Yes 10 0.46 No 0 0 No -39 0.7 Yes 42 60.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68493730 + NM_133509 RAD51B 0 . . . 6.2 80.93 24 5.48 No 32 1.23 Yes 0 0 No -49 0.47 No 26 71.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68790373 + NM_004360 CDH1 0 . . . 1.39 74.11 24 6.08 Yes 4 1.37 Yes 0 0 No -33 0.83 Yes 47 81.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190666541 + NM_000534 PMS1 0 . . . 6.6 82.46 38 6.39 Yes 71 0.63 No 0 0 No -27 0.61 No 41 89.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32920904 + NM_000059 BRCA2 0 . . . 6.46 86.34 56 6.27 Yes 65 0.83 Yes 0 0 No -33 0.49 No 40 54.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215614478 - NM_000465 BARD1 0 . . . 2.66 68.15 23 4.48 No -3 0.2 No 0 0 No -40 0.78 Yes 39 16.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131967409 + NM_005732 RAD50 0 . . . 0.5 0 88 7.07 Yes 75 -6.57 No 0 0 No -30 0.56 No 34 63.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108174428 + NM_000051 ATM 0 . . . 6.37 92.57 15 4.53 No 56 0.52 No 0 0 No -38 0.36 No 52 35.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21979625 - NM_000077 CDKN2A 0 . . . 1.18 75.11 27 6.48 Yes 42 2.1 Yes 0 0 No -26 0.89 Yes 16 55.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29114066 - NM_001005735 CHEK2 0 . . . 1.9 84.41 21 6.41 Yes 37 1.32 Yes 0 0 No -20 0.67 Yes 43 60.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90994740 - NM_002485 NBN 0 . . . 4.98 0 31 5.66 Yes 72 -3.68 No 0 0 No -30 0.65 No 48 62.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68949858 + NM_133509 RAD51B 0 . . . 5.9 79.62 22 5.29 No 48 0.74 No 0 0 No -21 0.28 No 43 47.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68963558 + NM_133509 RAD51B 0 . . . 4.04 0 31 6.4 Yes 53 0.92 Yes 0 0 No -30 0.89 Yes 54 41.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89636562 + NM_000314 PTEN 0 . . . 6.01 80.85 23 5.06 No 17 0.7 No 0 0 No -22 0.6 No 41 70.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104170064 - NM_001100119 XRCC3 0 . . . 3.01 72.8 19 5.7 Yes 75 -1.97 No 0 0 No -27 0.58 No 45 61.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68804809 + NM_004360 CDH1 0 . . . 4.22 84.23 15 5.06 No 51 -1.81 No 18 0.49 Yes -22 0.55 No 44 62.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 215651298 - NM_000465 BARD1 0 . . . 4.56 80.45 22 3.92 No 7 1.16 Yes 0 0 No -21 0.91 Yes 51 63.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108127761 + NM_000051 ATM 0 . . . 3.89 72.79 17 6.48 Yes 9 0.62 No 0 0 No -16 0.82 Yes 46 64.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105202053 + NM_021930 RINT1 0 . . . 5.15 90.14 43 4.73 No 3 0.79 Yes 0 0 No -40 0.76 Yes 43 61.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59802195 - NM_032043 BRIP1 0 . . . 1.55 75.94 24 3.82 No 11 0.13 No 0 0 No -23 0.5 No 47 88.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56783110 + NM_058216 RAD51C 0 . . . 5.75 67.42 20 4.9 No 48 0.29 No 0 0 No -19 0.71 Yes 46 76.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215634901 - NM_000465 BARD1 0 . . . 5 70.5 16 4.28 No 62 0.64 No 0 0 No -23 0.59 No 47 71.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68798769 + NM_004360 CDH1 0 . . . 1.98 69.9 28 5.2 No 42 1.51 Yes 0 0 No -27 0.85 Yes 16 80.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108171473 + NM_000051 ATM 0 . . . 0.87 77.08 27 6.26 Yes 13 -3.16 No 0 0 No -26 0.72 Yes 50 40.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68764732 + NM_133509 RAD51B 0 . . . 2.79 77.6 36 7.26 Yes 60 1.9 Yes 0 0 No -36 0.74 Yes 39 47.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152369474 - NM_005431 XRCC2 0 . . . 2.13 75.52 15 5.2 No 2 0.44 No 0 0 No -29 0.5 No 43 66.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68796224 + NM_133509 RAD51B 0 . . . 8.85 92.62 11 4.58 No 64 -2.2 No 0 0 No -42 0.48 No 39 82.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59820475 - NM_032043 BRIP1 0 . . . 0.06 78.54 26 5.06 No 12 -2.66 No 0 0 No -25 0.62 No 15 60.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32903494 + NM_000059 BRCA2 0 . . . 1.93 59.31 24 5.96 Yes 60 1.65 Yes 0 0 No -23 0.89 Yes 37 61.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68289519 + NM_133509 RAD51B 0 . . . 0.92 74.97 16 4.33 No 12 0.23 No 0 0 No -23 0.68 Yes 42 84.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68921989 + NM_133509 RAD51B 0 . . . 0.91 79.47 17 3.75 No 74 -5.43 No 0 0 No -23 0.45 No 49 83.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47729411 + NM_000251 MSH2 0 . . . 2.31 76.19 31 6.4 Yes 50 1.91 Yes 0 0 No -34 0.88 Yes 33 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68938464 + NM_133509 RAD51B 0 . . . 4.49 79.44 40 7.07 Yes 13 0 No 0 0 No -39 0.44 No 45 29.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215655695 - NM_000465 BARD1 0 . . . 7.39 84.59 31 6.44 Yes 6 1.39 Yes 0 0 No -21 0.28 No 52 83.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29125340 - NM_001005735 CHEK2 0 . . . 2.2 72.26 23 5.83 Yes 30 1.19 Yes 0 0 No -22 0.65 No 28 72.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56776469 + NM_058216 RAD51C 0 . . . 2.51 65.99 28 5.83 Yes 16 0.92 Yes 0 0 No -27 0.91 Yes 42 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131968433 + NM_005732 RAD50 0 . . . 7.29 78.42 27 4.98 No 46 -3.55 No 0 0 No -27 0.63 No 48 83.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41252908 - NM_007294 BRCA1 0 . . . 1.09 57.18 17 4.8 No 56 -2.81 No 0 0 No -33 0.37 No 50 20.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152349015 - NM_005431 XRCC2 0 . . . 3.5 83.33 53 7.21 Yes 3 0.82 Yes 0 0 No -41 0.62 No 50 92.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90947006 - NM_002485 NBN 0 . . . 8.11 85.52 17 4.8 No 15 0.5 No 0 0 No -16 0.69 Yes 43 72.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108143382 + NM_000051 ATM 0 . . . 1.02 63.09 18 6.18 Yes 50 0.42 No 0 0 No -23 0.65 No 45 66.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41264153 - NM_007294 BRCA1 0 . . . 4.11 70.31 12 5.1 No 67 -4.96 No 0 0 No -19 0.45 No 48 75.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69145385 + NM_133509 RAD51B 0 . . . 2.54 77.34 16 5.18 No 19 0.92 Yes 0 0 No -24 0.79 Yes 39 74.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41011467 + NM_001164269 RAD51 0 . . . 0.76 74.26 17 6.08 Yes 34 1.05 Yes 0 0 No -16 0.68 Yes 24 62.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131941221 + NM_005732 RAD50 0 . . . 5.4 73.62 23 5.1 No 7 1.03 Yes 0 0 No -22 0.63 No 51 93.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69078016 + NM_133509 RAD51B 0 . . . 1.98 74.23 34 5.86 Yes 41 1.4 Yes 0 0 No -37 0.56 No 54 33.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68784628 + NM_133509 RAD51B 0 . . . 2.27 66.46 34 6.2 Yes 33 -2.58 No 0 0 No -30 0.58 No 38 77.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47764540 + NM_000251 MSH2 0 . . . 1.12 68.34 19 4.93 No 63 0.92 Yes 0 0 No -18 0.67 Yes 18 40.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41234138 - NM_007294 BRCA1 0 . . . 2.69 71.02 35 5.97 Yes 72 -3.87 No 0 0 No -23 0.38 No 45 79.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68816470 + NM_133509 RAD51B 0 . . . 7.86 77.28 41 6.31 Yes 6 1.95 Yes 0 0 No -26 0.49 No 52 79.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68374300 + NM_133509 RAD51B 0 . . . 2.49 68.88 23 7.66 Yes 13 0.98 Yes 0 0 No -23 0.58 No 45 76.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152360951 - NM_005431 XRCC2 0 . . . 4.02 82.96 20 4.23 No 7 0.39 No 0 0 No -19 0.88 Yes 51 88.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68490079 + NM_133509 RAD51B 0 . . . 2.49 0 28 5.2 No 35 0.69 No 0 0 No -22 0.66 No 23 59.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344251 + NM_133509 RAD51B 0 . . . 5.21 71.1 47 6.71 Yes 57 1.45 Yes 0 0 No -57 0.34 No 45 57.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69078072 + NM_133509 RAD51B 0 . . . 9.53 87.95 36 5.15 No 23 0.71 No 0 0 No -20 0.29 No 42 52.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6020198 - NM_000535 PMS2 0 . . . 3.73 81.13 13 6.21 Yes 33 1.03 Yes 0 0 No -28 0.72 Yes 40 62.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47676593 + NM_000251 MSH2 0 . . . 1.08 84.22 30 5.31 No 33 1.13 Yes 0 0 No -26 0.33 No 50 49.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69084463 + NM_133509 RAD51B 0 . . . 3.36 66.24 24 5.33 No 29 0.4 No 0 0 No -23 0.43 No 36 86.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32912120 + NM_000059 BRCA2 0 . . . 7.96 82.19 31 6.4 Yes 15 0.04 No 0 0 No -27 0.71 Yes 42 82.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68405245 + NM_133509 RAD51B 0 . . . 2.29 73.3 21 5.66 Yes 65 -3.92 No 0 0 No -20 0.88 Yes 48 65.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68343797 + NM_133509 RAD51B 0 . . . 1.98 73.8 27 5.64 Yes 62 -3.33 No 0 0 No -22 0.6 No 46 62.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131891923 + NM_005732 RAD50 0 . . . 10.8 84.29 20 5 No 10 0.81 Yes 0 0 No -25 0.67 Yes 44 82.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190693710 + NM_000534 PMS1 0 . . . 6.1 72.15 30 5.92 Yes 21 0.86 Yes 0 0 No -30 0.74 Yes 37 83.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48016275 + NM_000179 MSH6 0 . . . 1.96 78.07 14 5 No 33 1.17 Yes 0 0 No -25 0.3 No 25 79.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215674793 - NM_000465 BARD1 0 . . . 0.83 0 27 5.66 Yes 18 0.33 No 0 0 No -27 0.64 No 40 94.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68444820 + NM_133509 RAD51B 0 . . . 9.47 0 24 5.47 No 34 0.84 Yes 0 0 No -23 0.59 No 52 91.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1215131 + NM_000455 STK11 0 . . . 2.17 77.57 18 3.8 No 70 -6.43 No 0 0 No -45 0.66 No 30 38.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90956849 - NM_002485 NBN 0 . . . 5.85 75.59 17 4.58 No 70 -5.16 No 0 0 No -22 0.79 Yes 52 71.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59913808 - NM_032043 BRIP1 0 . . . 3.9 82.42 49 9.09 Yes 65 1.08 Yes 0 0 No -40 0.73 Yes 51 67.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104162579 - NM_001100119 XRCC3 0 . . . 1.31 82.53 28 5.66 Yes 31 0.9 Yes 0 0 No -27 0.8 Yes 49 84.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94150747 - NM_005591 MRE11 0 . . . 4.31 78.41 21 4.53 No 25 0.9 Yes 0 0 No -32 0.45 No 46 59.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47630014 + NM_000251 MSH2 0 . . . 4.31 80.09 21 5.56 Yes 55 -1.39 No 0 0 No -26 0.94 Yes 42 74.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108163690 + NM_000051 ATM 0 . . . 8.12 75.56 16 4.3 No 63 0.64 No 0 0 No -27 0.76 Yes 41 61.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68666140 + NM_133509 RAD51B 0 . . . 7.06 70.49 18 5.06 No 9 1.21 Yes 0 0 No -32 0.57 No 40 77.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47676738 + NM_000251 MSH2 0 . . . 1.45 68.34 22 6.63 Yes 23 0.96 Yes 0 0 No -21 0.96 Yes 40 68.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75485946 - NM_001040108 MLH3 0 . . . 1.96 80.12 39 4.51 No 7 1.16 Yes 0 0 No -24 0.59 No 51 83.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68347783 + NM_133509 RAD51B 0 . . . 0.45 70.67 19 5.34 No 70 -2.44 No 0 0 No -24 0.89 Yes 30 33.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94161018 - NM_005591 MRE11 0 . . . 5.67 0 27 5.29 No 74 1.41 Yes 0 0 No -29 0.32 No 54 66.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68808844 + NM_133509 RAD51B 0 . . . 0.22 83.98 18 4.9 No 27 1.43 Yes 0 0 No -26 0.35 No 44 66.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68826073 + NM_133509 RAD51B 0 . . . 2.54 76.12 21 5.2 No 60 0.85 Yes 0 0 No -21 0.62 No 33 96.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41253960 - NM_007294 BRCA1 0 . . . 0.29 0 10 3.87 No 64 0.13 No 0 0 No -34 0.59 No 38 33.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215634508 - NM_000465 BARD1 0 . . . 5.94 84.07 27 5.32 No 39 0.98 Yes 0 0 No -26 0.84 Yes 48 45.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56795158 + NM_058216 RAD51C 0 . . . 3.56 0 45 7.12 Yes 1 0.43 No 0 0 No -26 0.41 No 40 50.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47802122 + NM_000251 MSH2 0 . . . 0.32 74.68 29 7.15 Yes 61 0.34 No 0 0 No -28 0.9 Yes 54 72.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47786289 + NM_000251 MSH2 0 . . . 2.86 0 30 6.77 Yes 54 1.22 Yes 0 0 No -38 0.47 No 47 91.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108183498 + NM_000051 ATM 0 . . . 7.35 80 21 5 No 74 2.02 Yes 0 0 No -20 0.72 Yes 40 77.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108149994 + NM_000051 ATM 0 . . . 0.4 0 15 4.47 No 1 0.16 No 0 0 No -35 0.3 No 45 42.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94161467 - NM_005591 MRE11 0 . . . 3.85 76.81 30 5.83 Yes 70 0.29 No 0 0 No -29 0.88 Yes 51 69.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68881460 + NM_133509 RAD51B 0 . . . 3.8 83.73 19 4.88 No 47 0.47 No 0 0 No -21 0.66 Yes 49 72.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69018673 + NM_133509 RAD51B 0 . . . 2.42 76.89 20 5 No 58 0.46 No 0 0 No -23 0.53 No 39 89.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41273060 - NM_007294 BRCA1 0 . . . 2.93 84.17 21 6.21 Yes 56 0.08 No 0 0 No -20 0.64 No 22 52.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47634482 + NM_000251 MSH2 0 . . . 0.47 0 19 4.8 No 22 -2.56 No 0 0 No -29 0.41 No 44 36.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29134403 - NM_001005735 CHEK2 0 . . . 4.03 80.91 17 5.66 Yes 70 -5.45 No 0 0 No -17 0.5 No 50 79.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47733607 + NM_000251 MSH2 0 . . . 4.93 81.27 26 4.82 No 65 -3.38 No 0 0 No -25 0.75 Yes 51 74.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68516558 + NM_133509 RAD51B 0 . . . 3.35 75.48 19 5 No 22 1.31 Yes 0 0 No -18 0.5 No 36 80.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23628180 - NM_024675 PALB2 0 . . . 0.92 76.63 23 6.39 Yes 58 -3.89 No 0 0 No -22 0.82 Yes 43 64.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131905856 + NM_005732 RAD50 0 . . . 2.68 64.49 22 5.08 No 69 0.07 No 0 0 No -22 0.7 Yes 49 50.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59875257 - NM_032043 BRIP1 0 . . . 6.16 85.24 23 5.29 No 40 1.31 Yes 0 0 No -22 0.6 No 44 46.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68754270 + NM_133509 RAD51B 0 . . . 4.92 77.86 15 2.72 No 23 0.72 No 0 0 No -28 0.93 Yes 47 44.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32892538 + NM_000059 BRCA2 0 . . . 0 0 10 4.47 No 47 -1.5 No 0 0 No -54 0.48 No 40 62.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68612301 + NM_133509 RAD51B 0 . . . 3.66 64.17 20 4.68 No -1 0.13 No 0 0 No -19 0.62 No 30 23.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68761858 + NM_133509 RAD51B 0 . . . 8.23 82.52 17 4.22 No 1 1.09 Yes 0 0 No -49 0.36 No 44 94.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41226750 - NM_007294 BRCA1 0 . . . 0.72 73.83 29 7.19 Yes 25 2.11 Yes 0 0 No -28 0.94 Yes 47 36.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152372600 - NM_005431 XRCC2 0 . . . 0.7 0 18 4.7 No 63 1.68 Yes 0 0 No -44 0.6 No 50 46.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47706249 + NM_000251 MSH2 0 . . . 8.87 77.26 26 6.03 Yes 63 0.04 No 0 0 No -25 0.71 Yes 47 77.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131962969 + NM_005732 RAD50 0 . . . 5.72 83.41 21 7.4 Yes 52 1.29 Yes 0 0 No -21 0.61 No 43 95.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68941523 + NM_133509 RAD51B 0 . . . 0.57 66.1 20 5.09 No 68 -5.61 No 0 0 No -19 0.7 Yes 48 71.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94164193 - NM_005591 MRE11 0 . . . 7.02 97.13 22 6.08 Yes 36 0.07 No 0 0 No -21 0.62 No 50 70.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68768358 + NM_133509 RAD51B 0 . . . 5.23 81.24 20 3.71 No 59 0.69 No 0 0 No -19 0.62 No 44 53.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41208328 - NM_007294 BRCA1 0 . . . 3.12 70.52 23 7.05 Yes 16 -2.18 No 0 0 No -31 0.79 Yes 43 71.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89713862 + NM_000314 PTEN 0 . . . 4.67 68.16 18 5.57 Yes 47 0.64 No 0 0 No -23 0.58 No 43 42.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152346905 - NM_005431 XRCC2 0 . . . 3.34 72.14 29 6.9 Yes -1 0.32 No 0 0 No -28 0.87 Yes 47 57.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56795205 + NM_058216 RAD51C 0 . . . 1.51 67.38 23 5.83 Yes 48 0.36 No 0 0 No -22 0.63 No 40 27.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108177460 + NM_000051 ATM 0 . . . 0.39 61.1 16 6.22 Yes -1 0.63 No 0 0 No -20 0.53 No 33 43.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131977358 + NM_005732 RAD50 0 . . . 4.07 71.51 25 5.06 No 7 0.56 No 0 0 No -25 0.48 No 51 80.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68663772 + NM_133509 RAD51B 0 . . . 1.07 68.26 39 6.24 Yes 32 1.43 Yes 0 0 No -20 0.27 No 46 36.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94158518 - NM_005591 MRE11 0 . . . 8.86 76.23 27 5.48 No 36 0.47 No 0 0 No -26 0.79 Yes 41 80.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105174912 + NM_021930 RINT1 0 . . . 10.62 88.62 23 5.82 Yes 20 0.57 No 0 0 No -22 0.81 Yes 38 92.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131938480 + NM_005732 RAD50 0 . . . 11.16 97.38 35 6.08 Yes 7 0.01 No 0 0 No -34 0.65 No 48 88.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68400356 + NM_133509 RAD51B 0 . . . 0.97 68.24 28 5.12 No 30 1.43 Yes 0 0 No -24 0.82 Yes 48 49.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94206331 - NM_005591 MRE11 0 . . . 4.63 80.74 22 4.98 No 75 0.09 No 0 0 No -21 0.64 No 27 63.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6029271 - NM_000535 PMS2 0 . . . 4.57 84.17 26 5.29 No 25 0.62 No 0 0 No -25 0.87 Yes 13 70.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131918175 + NM_005732 RAD50 0 . . . 3.27 79.08 21 5.2 No 50 1.19 Yes 0 0 No -24 0.39 No 44 69.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68576680 + NM_133509 RAD51B 0 . . . 1.29 64.71 21 4.51 No -1 0.09 No 0 0 No -20 0.91 Yes 41 42.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90954502 - NM_002485 NBN 0 . . . 1.35 70.29 33 6.06 Yes 36 0.69 No 0 0 No -32 0.77 Yes 49 65.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69087127 + NM_133509 RAD51B 0 . . . 9.15 88.37 19 4.9 No 41 2.13 Yes 0 0 No -18 0.77 Yes 46 59.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108113591 + NM_000051 ATM 0 . . . 12.03 96.75 46 6.31 Yes 11 0.68 No 0 0 No -25 0.33 No 47 53.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68501985 + NM_133509 RAD51B 0 . . . 4.56 89.48 22 5.19 No 66 2.18 Yes 0 0 No -21 0.35 No 52 69.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108203130 + NM_000051 ATM 0 . . . 1.81 80.22 31 5.98 Yes 58 -3.88 No 0 0 No -30 0.92 Yes 47 39.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69119525 + NM_133509 RAD51B 0 . . . 3.91 66.18 57 6.2 Yes 75 0.57 No 0 0 No -27 0.81 Yes 43 68.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68581714 + NM_133509 RAD51B 0 . . . 4.51 79.66 21 4.16 No 51 -4.28 No 0 0 No -20 0.34 No 52 53.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68384303 + NM_133509 RAD51B 0 . . . 4.14 68.54 25 5.45 No 37 -3.85 No 0 0 No -25 0.81 Yes 52 41.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90964825 - NM_002485 NBN 0 . . . 3.17 0 34 6.32 Yes -2 0.67 No 0 0 No -33 0.73 Yes 31 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59845789 - NM_032043 BRIP1 0 . . . 6.28 74.91 18 5.23 No 26 2.05 Yes 0 0 No -17 0.61 No 32 66.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47647061 + NM_000251 MSH2 0 . . . 4.63 84.95 19 4.36 No 62 -2.33 No 0 0 No -17 0.66 No 44 42.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108144332 + NM_000051 ATM 0 . . . 5.55 73.91 25 4.9 No 23 1.62 Yes 0 0 No -22 0.53 No 45 76.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48009231 + NM_000179 MSH6 0 . . . 5.24 90.14 14 5.74 Yes 47 1.17 Yes 0 0 No -30 0.43 No 21 93.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41273839 - NM_007294 BRCA1 0 . . . 2.1 64.02 48 6.34 Yes 10 -1.96 No 0 0 No -23 0.37 No 35 41.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68682821 + NM_133509 RAD51B 0 . . . 2.58 75.77 43 6.54 Yes -1 -1.8 No 0 0 No -36 0.53 No 46 48.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41256554 - NM_007294 BRCA1 0 . . . 0.69 0 12 4.24 No 60 0.47 No 0 0 No -29 0.58 No 46 67.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89730943 + NM_000314 PTEN 0 . . . 0.64 71.4 38 6.04 Yes 47 0.54 No 0 0 No -36 0.82 Yes 46 43.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68644666 + NM_133509 RAD51B 0 . . . 6.52 76.25 47 9.18 Yes 53 0.57 No 0 0 No -47 0.49 No 45 71.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68587882 + NM_133509 RAD51B 0 . . . 7.36 78.6 39 4.96 No 70 0.36 No 0 0 No -17 0.49 No 43 80.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6029515 - NM_000535 PMS2 0 . . . 0.37 84.29 22 5.71 Yes 62 -2.94 No 0 0 No -26 0.5 No 46 82.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215594650 - NM_000465 BARD1 0 . . . 0.86 65.2 16 4.89 No 1 0.82 Yes 0 0 No -20 0.51 No 50 73.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108161590 + NM_000051 ATM 0 . . . 6.95 80.67 19 4.58 No 41 0.21 No 0 0 No -18 0.4 No 51 57.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207702 - NM_007294 BRCA1 0 . . . 1.56 76.47 16 4.68 No 76 1.27 Yes 0 0 No -19 0.74 Yes 50 79.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68380026 + NM_133509 RAD51B 0 . . . 0.24 77.12 33 6.45 Yes 29 1.17 Yes 0 0 No -32 0.55 No 49 57.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131903961 + NM_005732 RAD50 0 . . . 3.95 85.51 17 5.29 No 21 1.53 Yes 0 0 No -21 0.55 No 37 86.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32974922 + NM_000059 BRCA2 0 . . . 0.68 74.15 27 5.29 No 43 0.31 No 0 0 No -26 0.78 Yes 47 69.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68888939 + NM_133509 RAD51B 0 . . . 2.07 79.48 33 6.79 Yes 9 0.63 No 0 0 No -36 0.64 No 49 93.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47670246 + NM_000251 MSH2 0 . . . 0.41 62.69 38 6.6 Yes 12 2.18 Yes 0 0 No -24 0.74 Yes 46 87.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7573265 - NM_000546 TP53 0 . . . 2.18 79.92 20 4.17 No 15 0.56 No 0 0 No -20 0.69 Yes 48 77.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56775564 + NM_058216 RAD51C 0 . . . 2.3 84.41 14 5 No 14 1.45 Yes 0 0 No -24 0.53 No 44 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68532198 + NM_133509 RAD51B 0 . . . 7.06 79.89 26 5.08 No 43 -0.71 No 0 0 No -25 0.68 Yes 41 62.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215652676 - NM_000465 BARD1 0 . . . 2.01 79.07 21 7.18 Yes 45 1.06 Yes 0 0 No -27 0.42 No 46 82.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94173563 - NM_005591 MRE11 0 . . . 0.47 74.76 27 4.56 No 5 0.67 No 0 0 No -22 0.66 No 13 51.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41003713 + NM_001164269 RAD51 0 . . . 1.45 68.49 38 5.04 No 66 -4.58 No 0 0 No -37 0.45 No 48 78.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68869073 + NM_004360 CDH1 0 . . . 0.78 73.56 21 4.89 No 17 -2.57 No 0 0 No -20 0.62 No 20 71.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32926964 + NM_000059 BRCA2 0 . . . 1.31 83.21 30 5.83 Yes -3 0.47 No 0 0 No -30 0.59 No 48 36.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68814986 + NM_133509 RAD51B 0 . . . 2.94 73.18 17 4.68 No 48 0.8 Yes 0 0 No -20 0.41 No 48 55.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32897862 + NM_000059 BRCA2 0 . . . 3.71 78.42 22 4.88 No 11 0.65 No 0 0 No -35 0.5 No 47 68.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68457683 + NM_133509 RAD51B 0 . . . 4.87 70.84 19 5.57 Yes 59 0.12 No 0 0 No -24 0.54 No 53 57.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68588127 + NM_133509 RAD51B 0 . . . 2.04 79.99 35 6.4 Yes 13 0.49 No 0 0 No -34 0.71 Yes 45 86.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41271071 - NM_007294 BRCA1 0 . . . 4.95 67.23 29 5.57 Yes 40 0.5 No 0 0 No -29 0.67 Yes 36 74.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215600033 - NM_000465 BARD1 0 . . . 2.76 80.55 40 8.24 Yes 43 1.02 Yes 0 0 No -39 0.73 Yes 50 51.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68861955 + NM_004360 CDH1 0 . . . 0.53 0 28 3.56 No 76 0.21 No 0 0 No -27 0.78 Yes 39 40.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108180709 + NM_000051 ATM 0 . . . 0.61 67.64 17 6.4 Yes 47 -4.88 No 0 0 No -34 0.44 No 61 50.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48007589 + NM_000179 MSH6 0 . . . 0.01 74.23 26 5.29 No 63 0.43 No 0 0 No -23 0.54 No 54 70.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59870002 - NM_032043 BRIP1 0 . . . 2.49 75.36 38 5.98 Yes 38 0.61 No 0 0 No -33 0.78 Yes 12 35.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69134274 + NM_133509 RAD51B 0 . . . 2.2 74.86 13 5.66 Yes 2 0.16 No 0 0 No -27 0.55 No 43 82.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6036956 - NM_000535 PMS2 0 . . . 6.16 75.56 23 5.82 Yes 47 1.29 Yes 0 0 No -22 0.75 Yes 47 58.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68923654 + NM_133509 RAD51B 0 . . . 3.01 0 24 4.62 No 57 2.03 Yes 0 0 No -29 0.74 Yes 11 5.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89635712 + NM_000314 PTEN 0 . . . 2.26 68.72 40 7.32 Yes 7 0.53 No 0 0 No -39 0.49 No 44 92.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41213030 - NM_007294 BRCA1 0 . . . 2.51 64.27 16 4.47 No 45 1.05 Yes 0 0 No -15 0.83 Yes 38 45.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1204650 + NM_000455 STK11 0 . . . 4.05 0 31 5.98 Yes 65 1.1 Yes 0 0 No -31 0.77 Yes 49 68.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41009596 + NM_001164269 RAD51 0 . . . 3.52 68.8 17 5.31 No 7 -2.08 No 0 0 No -25 0.84 Yes 52 78.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75479928 - NM_001040108 MLH3 0 . . . 2.27 60 40 4.24 No 72 0.92 Yes 0 0 No -31 0.7 Yes 52 56.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131958365 + NM_005732 RAD50 0 . . . 11.94 91.12 20 5.57 Yes 73 0.75 No 0 0 No -19 0.64 No 42 64.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152349325 - NM_005431 XRCC2 0 . . . 4.68 70.5 34 6.07 Yes 0 0.27 No 0 0 No -33 0.91 Yes 52 67.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68786511 + NM_004360 CDH1 0 . . . 7.17 83.92 33 5.42 No 17 0.48 No 0 0 No -32 0.36 No 41 95.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68864731 + NM_133509 RAD51B 0 . . . 1.88 75.85 39 4.74 No 18 0.79 Yes 0 0 No -26 0.5 No 46 78.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68551963 + NM_133509 RAD51B 0 . . . 6.67 79.81 18 3.85 No 35 0.29 No 0 0 No -42 0.43 No 49 87.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68764807 + NM_133509 RAD51B 0 . . . 5.33 83.24 42 6.25 Yes 26 -2.82 No 0 0 No -27 0.61 No 50 76.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32939636 + NM_000059 BRCA2 0 . . . 2.47 85.37 17 4.31 No 43 1.58 Yes 0 0 No -21 0.76 Yes 50 66.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68823629 + NM_004360 CDH1 0 . . . 2.91 70.96 37 6 Yes 32 1.84 Yes 0 0 No -30 0.62 No 26 40.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56796600 + NM_058216 RAD51C 0 . . . 0.5 0 17 5.46 No 10 1.05 Yes 0 0 No -16 0.69 Yes 48 81.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105189616 + NM_021930 RINT1 0 . . . 3.07 80.09 24 7.27 Yes 4 1.1 Yes 0 0 No -23 0.67 Yes 40 36.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37062559 + NM_000249 MLH1 0 . . . 3.73 75.73 24 7.24 Yes 31 1.13 Yes 0 0 No -23 0.6 No 40 76.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190686699 + NM_000534 PMS1 0 . . . 1.81 56.2 27 5.2 No 31 0.85 Yes 0 0 No -26 0.46 No 37 52.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89709729 + NM_000314 PTEN 0 . . . 4.36 75.17 22 4.65 No 9 1.01 Yes 0 0 No -50 0.53 No 44 66.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37085650 + NM_000249 MLH1 0 . . . 0.7 84.22 30 5.48 No 33 0.61 No 0 0 No -29 0.51 No 50 79.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47796196 + NM_000251 MSH2 0 . . . 5.18 88.13 21 5.14 No 61 -3.62 No 0 0 No -33 0.4 No 55 20.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89669104 + NM_000314 PTEN 0 . . . 4.31 84.95 24 6.5 Yes 26 0.06 No 0 0 No -23 0.93 Yes 36 46.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69038602 + NM_133509 RAD51B 0 . . . 0.87 69.83 16 5.17 No 2 0.55 No 0 0 No -42 0.47 No 56 54.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215671405 - NM_000465 BARD1 0 . . . 1.28 77.24 13 5.1 No 33 1.19 Yes 0 0 No -24 0.48 No 25 54.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68995037 + NM_133509 RAD51B 0 . . . 3.78 75.68 19 5.5 No 65 0.83 Yes 0 0 No -51 0.34 No 45 57.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68499372 + NM_133509 RAD51B 0 . . . 2.83 77.09 9 3.87 No 52 1.09 Yes 0 0 No -23 0.24 No 43 50.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68340077 + NM_133509 RAD51B 0 . . . 2.46 74.97 24 5.68 Yes 6 0.28 No 0 0 No -23 0.89 Yes 52 65.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68637045 + NM_133509 RAD51B 0 . . . 0.14 70.68 20 5.8 Yes 43 1.14 Yes 0 0 No -24 0.51 No 15 71.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68907826 + NM_133509 RAD51B 0 . . . 5.51 76.13 24 5.75 Yes 12 0.64 No 0 0 No -23 0.46 No 46 80.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89657947 + NM_000314 PTEN 0 . . . 4.09 90.18 32 4.65 No 49 0.99 Yes 0 0 No -28 0.32 No 32 67.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68481656 + NM_133509 RAD51B 0 . . . 4.09 72.99 38 6.93 Yes 25 1.01 Yes 0 0 No -32 0.76 Yes 41 92.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69112525 + NM_133509 RAD51B 0 . . . 3.89 70.41 33 6.16 Yes 72 -3.66 No 0 0 No -27 0.43 No 45 59.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89711468 + NM_000314 PTEN 0 . . . 1.67 64.05 30 6 Yes 11 1.52 Yes 0 0 No -23 0.6 No 41 85.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94166654 - NM_005591 MRE11 0 . . . 0.03 66.12 39 6.51 Yes 52 -4.73 No 0 0 No -24 0.67 Yes 48 47.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131963368 + NM_005732 RAD50 0 . . . 5.14 74.37 15 5.29 No 65 -4.95 No 0 0 No -22 0.37 No 49 48.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59810648 - NM_032043 BRIP1 0 . . . 4.29 81.72 33 6 Yes 3 0.81 Yes 0 0 No -32 0.77 Yes 47 83.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47665226 + NM_000251 MSH2 0 . . . 1.41 67.38 33 7.28 Yes 46 1.55 Yes 0 0 No -32 0.92 Yes 41 63.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48032917 + NM_000179 MSH6 0 . . . 3.09 78.1 40 6.44 Yes 1 0.82 Yes 0 0 No -26 0.51 No 38 66.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68520635 + NM_133509 RAD51B 0 . . . 5.45 73.38 25 6.47 Yes 27 1.06 Yes 0 0 No -24 0.88 Yes 53 62.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68311725 + NM_133509 RAD51B 0 . . . 2.24 72.12 29 5.91 Yes 20 -3.05 No 0 0 No -26 0.55 No 49 64.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68828075 + NM_133509 RAD51B 0 . . . 6.92 77.4 28 5.82 Yes 11 1.14 Yes 0 0 No -27 0.92 Yes 47 90.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68946281 + NM_133509 RAD51B 0 . . . 1.15 72.98 25 4.87 No 28 1.22 Yes 0 0 No -24 0.82 Yes 45 57.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47689884 + NM_000251 MSH2 0 . . . 4.48 80.27 29 8.18 Yes 32 0.76 No 0 0 No -28 0.6 No 46 49.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75503889 - NM_001040108 MLH3 0 . . . 7.02 88.27 20 6.19 Yes 3 0.62 No 0 0 No -19 0.81 Yes 47 51.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56775874 + NM_058216 RAD51C 0 . . . 6.53 86.16 22 5.64 Yes 7 1.07 Yes 0 0 No -25 0.79 Yes 51 87.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215655870 - NM_000465 BARD1 0 . . . 0.73 0 22 6.32 Yes 26 0.48 No 0 0 No -21 0.83 Yes 32 80.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68933101 + NM_133509 RAD51B 0 . . . 9.86 89.66 36 5.36 No 63 0.97 Yes 0 0 No -31 0.57 No 41 92.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69080301 + NM_133509 RAD51B 0 . . . 0.55 0 40 6.47 Yes 45 0.91 Yes 0 0 No -20 0.3 No 38 76.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68379684 + NM_133509 RAD51B 0 . . . 1.71 70.85 45 5.25 No 21 1.02 Yes 0 0 No -40 0.79 Yes 37 82.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89658805 + NM_000314 PTEN 0 . . . 0.71 60.9 19 5.71 Yes 74 0.49 No 0 0 No -32 0.39 No 50 62.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94180999 - NM_005591 MRE11 0 . . . 1.77 83.86 12 5.09 No 19 0.09 No 0 0 No -50 0.35 No 39 47.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108175916 + NM_000051 ATM 0 . . . 0.98 67.57 44 5.08 No 16 0.18 No 0 0 No -32 0.67 Yes 47 40.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23625571 - NM_024675 PALB2 0 . . . 3.64 70.39 32 5.09 No -4 0.75 No 0 0 No -32 0.61 No 49 41.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90969343 - NM_002485 NBN 0 . . . 0.65 0 20 5.16 No 73 1.37 Yes 0 0 No -29 0.81 Yes 56 34.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68911439 + NM_133509 RAD51B 0 . . . 8.01 90.11 18 4.69 No 70 -4.22 No 0 0 No -17 0.73 Yes 47 76.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69126617 + NM_133509 RAD51B 0 . . . 1.37 59.13 26 5.66 Yes 54 1.24 Yes 0 0 No -25 0.93 Yes 50 71.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59860192 - NM_032043 BRIP1 0 . . . 6.21 79.66 46 6.48 Yes 18 2.24 Yes 0 0 No -34 0.55 No 40 93.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47724859 + NM_000251 MSH2 0 . . . 3.48 84.24 21 4.79 No 4 1.19 Yes 0 0 No -20 0.81 Yes 54 70.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84385146 - NM_139076 FAM175A 0 . . . 1.21 78.8 26 6 Yes 34 0.32 No 0 0 No -25 0.76 Yes 21 40.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68984475 + NM_133509 RAD51B 0 . . . 5.04 83.62 58 8.46 Yes 50 0.82 Yes 0 0 No -37 0.72 Yes 45 45.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59800053 - NM_032043 BRIP1 0 . . . 2.85 68.53 30 5.44 No 18 0.8 Yes 0 0 No -36 0.65 No 30 57.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59898388 - NM_032043 BRIP1 0 . . . 1.76 75.22 20 4.64 No 64 -4.73 No 0 0 No -19 0.55 No 46 48.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131916271 + NM_005732 RAD50 0 . . . 4.68 82.37 21 6.22 Yes 20 0.97 Yes 0 0 No -34 0.8 Yes 48 42.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89653731 + NM_000314 PTEN 0 . . . 1.26 0 20 4.89 No 68 1.72 Yes 0 0 No -19 0.59 No 46 87.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108092927 + NM_000051 ATM 0 . . . 4.54 83.92 29 5.31 No 10 0.07 No 0 0 No -22 0.52 No 48 89.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32965793 + NM_000059 BRCA2 0 . . . 4.37 78.03 16 5.66 Yes 22 1.29 Yes 0 0 No -25 0.52 No 36 48.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52441704 - NM_004656 BAP1 0 . . . 5.8 94.32 18 6.16 Yes 35 -1.1 No 0 0 No -17 0.69 Yes 53 72.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32901254 + NM_000059 BRCA2 0 . . . 4.31 81.25 49 7.09 Yes 32 0.16 No 0 0 No -23 0.82 Yes 39 71.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69016339 + NM_133509 RAD51B 0 . . . 2.2 72.26 30 5.46 No 29 1.16 Yes 0 0 No -27 0.6 No 29 40.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131918636 + NM_005732 RAD50 0 . . . 1.57 69.03 15 4.25 No 4 0.23 No 0 0 No -18 0.46 No 46 40.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29113221 - NM_001005735 CHEK2 0 . . . 2.37 68.06 22 3.7 No 72 0.01 No 0 0 No -22 0.27 No 48 84.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68537388 + NM_133509 RAD51B 0 . . . 5.62 72.03 43 6.86 Yes 42 1.88 Yes 0 0 No -42 0.8 Yes 50 71.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68845186 + NM_004360 CDH1 0 . . . 4.39 78.98 25 5 No 64 1.1 Yes 0 0 No -24 0.95 Yes 50 53.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68370886 + NM_133509 RAD51B 0 . . . 0.72 0 25 5.06 No 7 0.17 No 0 0 No -24 0.5 No 31 52.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69045952 + NM_133509 RAD51B 0 . . . 2.66 0 23 4.99 No 49 0.35 No 0 0 No -22 0.81 Yes 45 56.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867905 - NM_032043 BRIP1 0 . . . 0.65 82.29 20 7.14 Yes 69 -3.94 No 0 0 No -19 0.6 No 43 65.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104170654 - NM_001100119 XRCC3 0 . . . 3.01 73.78 15 5.37 No -2 0.95 Yes 0 0 No -22 0.59 No 60 61.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108241445 + NM_000051 ATM 0 . . . 0.63 62.92 16 5.74 Yes 74 0.92 Yes 0 0 No -19 0.69 Yes 49 37.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90956193 - NM_002485 NBN 0 . . . 0.65 66.93 33 6.02 Yes 11 -3.17 No 0 0 No -19 0.41 No 13 27.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40992920 + NM_001164269 RAD51 0 . . . 1.47 66.63 18 6.07 Yes 16 0.75 No 0 0 No -26 0.7 Yes 42 73.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131949998 + NM_005732 RAD50 0 . . . 6.38 78.26 23 4.91 No 69 -2.97 No 0 0 No -23 0.76 Yes 45 60.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137834 + NM_133509 RAD51B 0 . . . 0.96 71.26 34 6.32 Yes 41 1.54 Yes 0 0 No -33 0.82 Yes 17 43.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59846872 - NM_032043 BRIP1 0 . . . 4.55 82.45 28 5.83 Yes 0 0.63 No 0 0 No -55 0.78 Yes 45 78.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69073942 + NM_133509 RAD51B 0 . . . 0.51 0 10 4.59 No 15 -0.89 No 0 0 No -8 0.51 No 43 52.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69126497 + NM_133509 RAD51B 0 . . . 2.71 83.06 29 5.55 No NA NA NA 0 0 No -32 0.3 No 54 54.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47726694 + NM_000251 MSH2 0 . . . 1.63 59.27 43 6.11 Yes 41 0.74 No 0 0 No -27 0.61 No 44 42.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32906138 + NM_000059 BRCA2 0 . . . 2.04 80.98 16 4.69 No 39 -3.86 No 0 0 No -23 0.49 No 44 52.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75481237 - NM_001040108 MLH3 0 . . . 4.38 80.39 22 4.86 No 21 0.22 No 0 0 No -22 0.51 No 52 66.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59931822 - NM_032043 BRIP1 0 . . . 3.16 67.23 23 5.32 No 23 1.41 Yes 0 0 No -22 0.64 No 45 67.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75484656 - NM_001040108 MLH3 0 . . . 3.42 80.34 47 5.23 No 32 1.36 Yes 0 0 No -38 0.75 Yes 48 66.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90945802 - NM_002485 NBN 0 . . . 3.59 69.01 15 4.58 No 54 -1.7 No 0 0 No -57 0.66 Yes 44 67.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68426217 + NM_133509 RAD51B 0 . . . 3.67 81.72 25 5.57 Yes 76 1.72 Yes 0 0 No -24 0.94 Yes 47 90.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23645459 - NM_024675 PALB2 0 . . . 0.23 62.25 27 4.61 No 74 -6.68 No 0 0 No -27 0.45 No 40 40.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108163150 + NM_000051 ATM 0 . . . 8.26 86.6 32 5.57 Yes 23 1.43 Yes 0 0 No -28 0.37 No 35 93.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59821172 - NM_032043 BRIP1 0 . . . 1.78 74.97 33 5.63 Yes 60 0.4 No 0 0 No -19 0.79 Yes 52 27.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68831953 + NM_004360 CDH1 0 . . . 1.72 80.22 35 6.08 Yes 58 -3.66 No 0 0 No -34 0.93 Yes 55 50.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108213612 + NM_000051 ATM 0 . . . 2.58 68.01 11 4.17 No 73 -5.33 No 0 0 No -19 0.61 No 50 67.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68895095 + NM_133509 RAD51B 0 . . . 0.6 71.59 21 4.39 No 48 2.23 Yes 0 0 No -21 0.61 No 29 54.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32897802 + NM_000059 BRCA2 0 . . . 0.24 69.04 15 4.58 No 20 0.28 No 0 0 No -40 0.71 Yes 37 62.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21991942 - NM_000077 CDKN2A 0 . . . 4.62 82.81 50 5.65 Yes 65 0.46 No 0 0 No -24 0.63 No 42 37.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68761511 + NM_133509 RAD51B 0 . . . 1.71 65.02 25 4.54 No 76 -5.31 No 0 0 No -21 0.24 No 45 50.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69028277 + NM_133509 RAD51B 0 . . . 1.28 67.91 23 4.9 No 59 -4.69 No 0 0 No -22 0.93 Yes 51 55.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6049116 - NM_000535 PMS2 0 . . . 2.28 66.86 38 6.58 Yes NA NA NA 0 0 No -32 0.43 No 60 16.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131951245 + NM_005732 RAD50 0 . . . 10.38 91.28 23 4.72 No 7 0.92 Yes 0 0 No -35 0.82 Yes 47 57.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68647061 + NM_133509 RAD51B 0 . . . 2.01 0 37 7.29 Yes 76 2.48 Yes 0 0 No -36 0.89 Yes 47 78.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68490817 + NM_133509 RAD51B 0 . . . 3.65 76.81 24 6.5 Yes 74 0.29 No 0 0 No -23 0.51 No 46 58.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59756630 - NM_032043 BRIP1 0 . . . 2.26 66.94 27 5.97 Yes 22 -2.16 No 0 0 No -26 0.44 No 41 84.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108213666 + NM_000051 ATM 0 . . . 2.55 71.1 35 6.16 Yes 31 0.6 No 0 0 No -25 0.54 No 52 64.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105174860 + NM_021930 RINT1 0 . . . 0.93 76.99 19 5.3 No 27 0.65 No 0 0 No -28 0.55 No 21 48.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47735935 + NM_000251 MSH2 0 . . . 1.66 75.7 16 5.1 No 14 -1.8 No 0 0 No -45 0.77 Yes 22 43.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69091744 + NM_133509 RAD51B 0 . . . 2.71 76.25 23 5.03 No 27 0.55 No 0 0 No -22 0.86 Yes 46 64.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190684163 + NM_000534 PMS1 0 . . . 0.99 0 29 5.47 No 50 0.47 No 0 0 No -23 0.61 No 49 47.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59873130 - NM_032043 BRIP1 0 . . . 2.94 66.67 11 4.69 No 74 -5.57 No 0 0 No -50 0.65 No 49 23.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68293191 + NM_133509 RAD51B 0 . . . 7.56 89.97 25 4.18 No 13 0.13 No 0 0 No -20 0.4 No 45 62.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90968783 - NM_002485 NBN 0 . . . 5.85 77.43 22 4.61 No 26 0.88 Yes 0 0 No -26 0.6 No 41 59.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108202851 + NM_000051 ATM 0 . . . 3.68 75.4 17 6.68 Yes 38 0.7 No 0 0 No -32 0.64 No 41 51.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32954924 + NM_000059 BRCA2 0 . . . 4.55 76.7 19 3.64 No 14 1.12 Yes 0 0 No -26 0.61 No 44 64.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108112344 + NM_000051 ATM 0 . . . 0.81 73.27 28 5.63 Yes 43 0.53 No 0 0 No -27 0.56 No 46 76.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68378539 + NM_133509 RAD51B 0 . . . 9.68 86.35 28 6.16 Yes 11 1.04 Yes 0 0 No -28 0.66 Yes 47 74.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6030618 - NM_000535 PMS2 0 . . . 7.14 74.04 14 4.29 No 52 0.53 No 0 0 No -30 0.29 No 43 81.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68780049 + NM_004360 CDH1 0 . . . 0.64 0 35 5.01 No 9 0.65 No 0 0 No -21 0.4 No 36 74.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69009967 + NM_133509 RAD51B 0 . . . 3.18 73.79 20 5.57 Yes 44 0.32 No 0 0 No -19 0.65 No 50 34.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108094017 + NM_000051 ATM 0 . . . 4.33 79.46 26 5.39 No 2 1.05 Yes 0 0 No -25 0.89 Yes 44 58.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69088169 + NM_133509 RAD51B 0 . . . 7.09 81.85 20 4.47 No 35 0.84 Yes 0 0 No -19 0.75 Yes 22 86.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68560737 + NM_133509 RAD51B 0 . . . 4.58 81.81 18 4.72 No 36 0.1 No 0 0 No -27 0.67 Yes 52 52.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68993678 + NM_133509 RAD51B 0 . . . 2.67 71.47 29 4.61 No 38 0.81 Yes 0 0 No -22 0.67 Yes 20 82.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75513083 - NM_001040108 MLH3 0 . . . 0.65 71.16 33 5.76 Yes 72 0.66 No 0 0 No -32 0.83 Yes 40 76.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152361520 - NM_005431 XRCC2 0 . . . 1.28 67.12 43 5.48 No 71 -4.66 No 0 0 No -23 0.63 No 50 56.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131963007 + NM_005732 RAD50 0 . . . 1.46 0 33 6.85 Yes 57 1.12 Yes 0 0 No -32 0.91 Yes 48 53.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68669021 + NM_133509 RAD51B 0 . . . 0.78 64.87 25 4.42 No 40 -1.63 No 0 0 No -24 0.94 Yes 34 51.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75511049 - NM_001040108 MLH3 0 . . . 5.43 78.2 29 5.99 Yes 18 0.31 No 0 0 No -23 0.41 No 40 92.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152367730 - NM_005431 XRCC2 0 . . . 0.94 76.63 26 5.07 No 68 -5.19 No 0 0 No -25 0.84 Yes 48 80.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68444650 + NM_133509 RAD51B 0 . . . 0.66 0 22 5.74 Yes 73 0.33 No 0 0 No -21 0.82 Yes 50 69.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89666509 + NM_000314 PTEN 0 . . . 0.43 72.41 23 7.21 Yes 3 0.32 No 0 0 No -22 0.9 Yes 50 53.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68613673 + NM_133509 RAD51B 0 . . . 0.03 70.96 28 5.29 No 74 -6.68 No 0 0 No -52 0.55 No 52 42.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41272182 - NM_007294 BRCA1 0 . . . 1.16 72.51 28 5.2 No 28 1.29 Yes 0 0 No -20 0.67 Yes 41 59.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94154689 - NM_005591 MRE11 0 . . . 5.34 80.79 14 5.7 Yes 43 0.09 No 0 0 No -25 0.29 No 49 62.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190727489 + NM_000534 PMS1 0 . . . 3.8 82.63 28 4.92 No 12 -1.9 No 0 0 No -22 0.95 Yes 49 72.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69116046 + NM_133509 RAD51B 0 . . . 0.14 76.04 21 4.69 No 2 0.27 No 0 0 No -36 0.8 Yes 56 45.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68732218 + NM_133509 RAD51B 0 . . . 0.35 66.86 29 5.29 No 28 0.44 No 0 0 No -28 0.7 Yes 54 58.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47776388 + NM_000251 MSH2 0 . . . 1.63 69.85 22 4.17 No 76 -3.89 No 0 0 No -21 0.72 Yes 52 59.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68568983 + NM_133509 RAD51B 0 . . . 0.92 66.75 22 5.29 No 26 1.06 Yes 0 0 No -27 0.66 No 43 83.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68528301 + NM_133509 RAD51B 0 . . . 1.42 0 24 4.8 No 3 0.59 No 0 0 No -24 0.71 Yes 26 95.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41214248 - NM_007294 BRCA1 0 . . . 1.97 75.43 22 7.81 Yes 48 0.28 No 0 0 No -21 0.64 No 23 75.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68815432 + NM_133509 RAD51B 0 . . . 2.7 80.61 18 4.69 No 59 -3.71 No 0 0 No -15 0.34 No 51 74.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190659799 + NM_000534 PMS1 0 . . . 3.96 71.84 36 7.82 Yes 69 -5.29 No 0 0 No -32 0.53 No 46 71.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69139544 + NM_133509 RAD51B 0 . . . 7.47 85.22 23 5.39 No 60 0.38 No 0 0 No -23 0.55 No 49 86.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68857221 + NM_004360 CDH1 0 . . . 4.52 63.92 58 8.48 Yes 74 -3.27 No 0 0 No -34 0.4 No 47 70.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68583746 + NM_133509 RAD51B 0 . . . 4.22 75.85 23 5.39 No 16 0.02 No 0 0 No -40 0.42 No 42 79.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33435307 - NM_002878 RAD51D 0 . . . 2.74 71.6 11 4.12 No 32 0.36 No 0 0 No -18 0.28 No 39 59.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68713434 + NM_133509 RAD51B 0 . . . 1.9 76.05 18 3.84 No 66 1.15 Yes 0 0 No -29 0.51 No 53 69.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68835150 + NM_133509 RAD51B 0 . . . 9.23 78.97 28 4.91 No 44 1.43 Yes 0 0 No -24 0.86 Yes 48 63.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68380516 + NM_133509 RAD51B 0 . . . 6.47 67.2 26 5.66 Yes 22 0.59 No 0 0 No -25 0.85 Yes 41 73.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6037222 - NM_000535 PMS2 0 . . . 0.37 81.28 29 7.35 Yes 71 -4.02 No 0 0 No -28 0.91 Yes 50 74.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215615268 - NM_000465 BARD1 0 . . . 0.74 0 20 7.14 Yes 15 0.75 No 0 0 No -19 0.74 Yes 43 82.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68824360 + NM_133509 RAD51B 0 . . . 1.53 72.81 27 5.76 Yes 11 0.49 No 0 0 No -32 0.47 No 34 45.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68319658 + NM_133509 RAD51B 0 . . . 4.42 67.59 22 6.42 Yes 70 0.54 No 0 0 No -28 0.85 Yes 37 67.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56770578 + NM_058216 RAD51C 0 . . . 0.66 73.25 18 5.91 Yes 32 1.12 Yes 0 0 No -31 0.43 No 55 21.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94186993 - NM_005591 MRE11 0 . . . 4.98 74.27 21 4.82 No 15 1.32 Yes 0 0 No -29 0.54 No 43 79.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37035918 + NM_000249 MLH1 0 . . . 4.03 74.8 14 5.64 Yes 20 0.28 No 0 0 No -23 0.37 No 44 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59828730 - NM_032043 BRIP1 0 . . . 0.1 0 24 3.59 No 29 0.42 No 0 0 No -23 0.53 No 29 61.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131958103 + NM_005732 RAD50 0 . . . 6.28 79.16 34 5.6 Yes 75 1.22 Yes 0 0 No -55 0.36 No 51 81.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68720672 + NM_133509 RAD51B 0 . . . 5.68 75.74 15 4.1 No 53 0.47 No 0 0 No -48 0.37 No 38 58.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190742071 + NM_000534 PMS1 0 . . . 1.36 79.14 23 5.74 Yes 18 -2.93 No 0 0 No -23 0.5 No 50 32.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59815511 - NM_032043 BRIP1 0 . . . 8.61 78.25 13 5.38 No 70 -4.58 No 0 0 No -28 0.55 No 33 68.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37088228 + NM_000249 MLH1 0 . . . 1.4 0 16 4.95 No 20 1.19 Yes 0 0 No -35 0.32 No 38 81.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47698201 + NM_000251 MSH2 0 . . . 7.74 88.74 29 5.59 Yes 71 -5.54 No 0 0 No -28 0.93 Yes 46 73.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69036427 + NM_133509 RAD51B 0 . . . 1.55 75.43 33 6.24 Yes 29 0.77 Yes 0 0 No -35 0.53 No 16 67.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68833459 + NM_004360 CDH1 0 . . . 3.78 80.83 17 9.31 Yes 58 1.46 Yes 0 0 No -29 0.54 No 42 73.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47628571 + NM_000251 MSH2 0 . . . 6.23 73.91 14 5.53 No 7 1.17 Yes 0 0 No -24 0.63 No 51 79.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23624798 - NM_024675 PALB2 0 . . . 2.24 80.12 16 3.94 No 7 1.16 Yes 0 0 No -24 0.59 No 51 78.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68527904 + NM_133509 RAD51B 0 . . . 1.44 83.85 38 7.25 Yes 33 1.12 Yes 0 0 No -23 0.45 No 51 53.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89664436 + NM_000314 PTEN 0 . . . 0.41 66.98 16 5.29 No 11 0.51 No 0 0 No -21 0.64 No 47 82.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47763581 + NM_000251 MSH2 0 . . . 6.26 77.57 28 5.36 No 0 0.04 No 0 0 No -22 0.78 Yes 43 70.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68331104 + NM_133509 RAD51B 0 . . . 1.28 71.33 43 6.6 Yes -2 0.08 No 0 0 No -42 0.9 Yes 43 43.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68645844 + NM_133509 RAD51B 0 . . . 6.9 82.9 47 6.72 Yes 26 1.3 Yes 0 0 No -39 0.74 Yes 53 56.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68659544 + NM_133509 RAD51B 0 . . . 3.92 79.71 29 6.32 Yes 68 0.98 Yes 0 0 No -28 0.8 Yes 35 90.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108155871 + NM_000051 ATM 0 . . . 1.36 77.44 22 5.66 Yes 7 1.01 Yes 0 0 No -21 0.57 No 51 81.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105197332 + NM_021930 RINT1 0 . . . 4.27 66.76 26 6 Yes 0 0.24 No 0 0 No -25 0.96 Yes 45 95.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68512119 + NM_133509 RAD51B 0 . . . 2.23 73.35 40 6.31 Yes 14 0.77 No 0 0 No -19 0.29 No 44 92.6 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108121884 + NM_000051 ATM 0 . . . 5.15 72.88 23 5.94 Yes 1 1.5 Yes 0 0 No -22 0.73 Yes 46 96.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32958683 + NM_000059 BRCA2 0 . . . 1.81 61.18 14 5 No 67 0.38 No 0 0 No -18 0.25 No 33 57.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152352008 - NM_005431 XRCC2 0 . . . 0.17 69.72 12 5.12 No 66 0.66 No 0 0 No -24 0.34 No 46 36.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21979774 - NM_000077 CDKN2A 0 . . . 3.2 75.39 16 4.43 No 16 0.81 Yes 0 0 No -18 0.44 No 42 66.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32901025 + NM_000059 BRCA2 0 . . . 2.09 62.52 29 5.9 Yes 31 0.36 No 0 0 No -28 0.81 Yes 41 90.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108100089 + NM_000051 ATM 0 . . . 4.03 69.49 27 6.02 Yes 43 -4.28 No 0 0 No -23 0.55 No 43 46.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48026870 + NM_000179 MSH6 0 . . . 0.01 0 39 4.81 No 52 0.96 Yes 0 0 No -25 0.47 No 43 55.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68945424 + NM_133509 RAD51B 0 . . . 0.25 71.81 15 4.58 No 64 1.57 Yes 0 0 No -22 0.72 Yes 44 83.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190718018 + NM_000534 PMS1 0 . . . 0.17 73.38 25 7.36 Yes 61 0.99 Yes 0 0 No -24 0.83 Yes 54 55.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37084208 + NM_000249 MLH1 0 . . . 0.44 71.28 16 5.39 No 35 1.11 Yes 0 0 No -22 0.43 No 23 32.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75488143 - NM_001040108 MLH3 0 . . . 0.02 65.13 17 5.3 No 71 1.06 Yes 0 0 No -16 0.72 Yes 52 70.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68849927 + NM_133509 RAD51B 0 . . . 1.71 65.27 36 6.82 Yes 66 0.62 No 0 0 No -30 0.48 No 43 57.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68674003 + NM_133509 RAD51B 0 . . . 5.04 73 32 4.06 No 34 -2.67 No 0 0 No -31 0.26 No 47 43.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32966546 + NM_000059 BRCA2 0 . . . 4.24 72.77 31 5.07 No 69 0.66 No 0 0 No -27 0.45 No 42 90.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68330035 + NM_133509 RAD51B 0 . . . 1.15 0 35 5.59 Yes 37 1.21 Yes 0 0 No -26 0.36 No 49 43.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59867620 - NM_032043 BRIP1 0 . . . 5.33 67.43 32 5.71 Yes 63 1.4 Yes 0 0 No -31 0.48 No 49 73.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90963750 - NM_002485 NBN 0 . . . 4.04 75.97 27 5.03 No 36 0.21 No 0 0 No -19 0.85 Yes 47 68.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68502439 + NM_133509 RAD51B 0 . . . 0.67 74.54 55 8.24 Yes 5 0.6 No 0 0 No -29 0.52 No 47 55.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32944863 + NM_000059 BRCA2 0 . . . 1.41 84.22 37 6.48 Yes 3 0.7 No 0 0 No -26 0.64 No 50 60.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84401355 - NM_139076 FAM175A 0 . . . 4.02 80.12 20 5.74 Yes 10 1.27 Yes 0 0 No -19 0.71 Yes 48 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94202680 - NM_005591 MRE11 0 . . . 0.63 73.15 28 4.35 No 4 1.28 Yes 0 0 No -23 0.56 No 37 64.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68662306 + NM_133509 RAD51B 0 . . . 6.02 86.41 32 6.16 Yes 6 0.72 No 0 0 No -31 0.54 No 44 95.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84389540 - NM_139076 FAM175A 0 . . . 11.98 85.53 14 5.2 No 6 0.84 Yes 0 0 No -46 0.5 No 43 52.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68484441 + NM_133509 RAD51B 0 . . . 0.6 74.68 28 5.57 Yes 4 0.1 No 0 0 No -24 0.62 No 54 86.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68344295 + NM_133509 RAD51B 0 . . . 10.62 80.06 23 4.66 No 68 0.54 No 0 0 No -22 0.52 No 46 82.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89698712 + NM_000314 PTEN 0 . . . 3.41 83.77 53 7.26 Yes 56 0.97 Yes 0 0 No -28 0.73 Yes 43 72.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68775097 + NM_133509 RAD51B 0 . . . 4.11 84.38 22 5.29 No 74 -3.28 No 0 0 No -21 0.84 Yes 47 85.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68993104 + NM_133509 RAD51B 0 . . . 5.66 80.3 31 5.66 Yes 72 -2.81 No 0 0 No -30 0.82 Yes 48 57.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59833417 - NM_032043 BRIP1 0 . . . 2.48 67.8 21 5.01 No 34 0.85 Yes 0 0 No -20 0.66 No 43 72.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68598472 + NM_133509 RAD51B 0 . . . 5.65 83.89 33 5.69 Yes 68 0.08 No 0 0 No -32 0.48 No 36 57.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105195915 + NM_021930 RINT1 0 . . . 1.02 68.13 31 4.52 No 41 1.11 Yes 0 0 No -23 0.63 No 17 30.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68719640 + NM_133509 RAD51B 0 . . . 0.82 64.12 32 8.41 Yes 41 -2.84 No 0 0 No -31 0.71 Yes 57 35.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75483397 - NM_001040108 MLH3 0 . . . 6.97 79.19 31 6.21 Yes 45 0.61 No 0 0 No -30 0.61 No 47 83.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89661234 + NM_000314 PTEN 0 . . . 3.33 0 40 6.66 Yes 62 1.17 Yes 0 0 No -39 0.5 No 41 45.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68309598 + NM_133509 RAD51B 0 . . . 2.39 87.5 34 4.81 No 6 0.03 No 0 0 No -33 0.47 No 52 64.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105192055 + NM_021930 RINT1 0 . . . 1.46 74.61 16 5.19 No 5 0.8 Yes 0 0 No -21 0.59 No 40 50.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48034555 + NM_000179 MSH6 0 . . . 4.21 76.96 12 4.24 No 22 1.43 Yes 0 0 No -45 0.46 No 24 89.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68388970 + NM_133509 RAD51B 0 . . . 3.65 88.32 30 7.28 Yes 64 1.56 Yes 0 0 No -30 0.67 Yes 46 72.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90989152 - NM_002485 NBN 0 . . . 2.04 74.88 42 5.25 No 43 0.76 No 0 0 No -24 0.87 Yes 51 70.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68308388 + NM_133509 RAD51B 0 . . . 2.22 76.81 28 5.37 No 12 0.5 No 0 0 No -42 0.59 No 51 71.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68460466 + NM_133509 RAD51B 0 . . . 5.49 74.11 23 5.82 Yes 54 1.66 Yes 0 0 No -22 0.4 No 51 58.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131919570 + NM_005732 RAD50 0 . . . 5.5 85.02 44 7.53 Yes 7 1.15 Yes 0 0 No -43 0.66 No 46 73.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23619097 - NM_024675 PALB2 0 . . . 4.23 77.43 23 5.38 No 63 1.08 Yes 0 0 No -22 0.81 Yes 51 38.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152362080 - NM_005431 XRCC2 0 . . . 7.5 74.63 10 4 No 74 1.22 Yes 0 0 No -26 0.65 No 48 61.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68784381 + NM_133509 RAD51B 0 . . . 1.94 0 19 4.53 No 3 0.63 No 0 0 No -18 0.41 No 46 64.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68802376 + NM_004360 CDH1 0 . . . 4.64 75.59 12 4.24 No 55 0.32 No 0 0 No -24 0.61 No 46 94.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94164348 - NM_005591 MRE11 0 . . . 0.88 67.21 87 6.68 Yes 56 1.04 Yes 0 0 No -24 0.37 No 43 53.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131938528 + NM_005732 RAD50 0 . . . 7.12 87.94 14 4.57 No 38 -2.13 No 0 0 No -20 0.42 No 47 88.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41017414 + NM_001164269 RAD51 0 . . . 7.22 86.73 26 5.97 Yes 75 1.67 Yes 0 0 No -25 0.94 Yes 49 50.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68972165 + NM_133509 RAD51B 0 . . . 6.36 82.34 19 4.43 No 7 0.26 No 0 0 No -21 0.59 No 51 86.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37083301 + NM_000249 MLH1 0 . . . 4.86 77.21 19 3.99 No 0 0.64 No 0 0 No -18 0.94 Yes 50 66.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32919236 + NM_000059 BRCA2 0 . . . 4.57 78.04 15 5.48 No 3 1.12 Yes 0 0 No -23 0.69 Yes 37 69.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68294209 + NM_133509 RAD51B 0 . . . 3.87 73.25 17 4.61 No 30 1.28 Yes 0 0 No -24 0.74 Yes 39 96.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48015604 + NM_000179 MSH6 0 . . . 1.29 74.73 38 4.97 No 33 1.07 Yes 0 0 No -37 0.45 No 25 67.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47681775 + NM_000251 MSH2 0 . . . 8.38 79.58 27 4.17 No 5 0.49 No 0 0 No -26 0.74 Yes 38 59.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68841985 + NM_133509 RAD51B 0 . . . 2 0 15 4.12 No 17 2.14 Yes 0 0 No -14 0.28 No 41 92.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68918091 + NM_133509 RAD51B 0 . . . 3.67 67.27 57 6.8 Yes 36 0.77 Yes 0 0 No -31 0.89 Yes 47 50.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29125007 - NM_001005735 CHEK2 0 . . . 4.31 70.76 21 5.74 Yes 59 0.75 No 0 0 No -21 0.38 No 40 48.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68845906 + NM_133509 RAD51B 0 . . . 0.48 80.15 32 7.87 Yes 28 1.24 Yes 0 0 No -31 0.8 Yes 46 44.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75483107 - NM_001040108 MLH3 0 . . . 3.55 73.18 13 4.12 No -2 -2.16 No 0 0 No -27 0.68 Yes 24 87.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68804020 + NM_133509 RAD51B 0 . . . 1.42 64.98 10 4 No 35 0.3 No 0 0 No -26 0.52 No 27 40.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48031741 + NM_000179 MSH6 0 . . . 4.54 69.54 32 4.36 No 74 -2.12 No 0 0 No -27 0.92 Yes 38 80.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215621498 - NM_000465 BARD1 0 . . . 8.43 75.15 32 6.95 Yes 61 1.33 Yes 0 0 No -25 0.48 No 44 87.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68598389 + NM_133509 RAD51B 0 . . . 2.21 0 20 4.99 No 20 0.04 No 0 0 No -19 0.5 No 48 62.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47718200 + NM_000251 MSH2 0 . . . 0.14 60.69 47 5.91 Yes 34 -0.68 No 0 0 No -27 0.8 Yes 48 44.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59815602 - NM_032043 BRIP1 0 . . . 0.06 66.16 19 5.16 No -1 0.13 No 0 0 No -26 0.81 Yes 55 46.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68835281 + NM_133509 RAD51B 0 . . . 7.27 81.39 34 5.14 No 12 0.53 No 0 0 No -46 0.59 No 46 73.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23637239 - NM_024675 PALB2 0 . . . 2.6 73 22 7.93 Yes 30 -2.3 No 0 0 No -28 0.9 Yes 44 53.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108180574 + NM_000051 ATM 0 . . . 6.82 76.47 12 5.39 No 60 1.22 Yes 0 0 No -28 0.31 No 44 78.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41276330 - NM_007294 BRCA1 0 . . . 0.32 59.96 70 12.31 Yes 64 0.78 Yes 0 0 No -35 0.61 No 51 57.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94173758 - NM_005591 MRE11 0 . . . 11.75 97.2 9 3.87 No 61 -1.92 No 0 0 No -25 0.88 Yes 48 74.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68742229 + NM_133509 RAD51B 0 . . . 4.47 0 47 7.68 Yes 10 1.03 Yes 0 0 No -30 0.39 No 45 68.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56808125 + NM_058216 RAD51C 0 . . . 6.76 83.73 14 4.24 No 35 0.67 No 0 0 No -13 0.56 No 47 51.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108121336 + NM_000051 ATM 0 . . . 7.78 76.26 29 5.47 No 1 0.92 Yes 0 0 No -28 0.76 Yes 42 62.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1204470 + NM_000455 STK11 0 . . . 3.73 85.87 29 5.73 Yes 7 1.07 Yes 0 0 No -28 0.48 No 51 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69071857 + NM_133509 RAD51B 0 . . . 2.49 69.22 48 6.02 Yes 17 1 Yes 0 0 No -37 0.58 No 41 68.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69107627 + NM_133509 RAD51B 0 . . . 1.72 68.2 55 6.28 Yes -3 1.21 Yes 0 0 No -26 0.89 Yes 44 97.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21994928 - NM_000077 CDKN2A 0 . . . 4.28 66.54 26 6 Yes 31 1.6 Yes 0 0 No -25 0.86 Yes 27 92.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69025773 + NM_133509 RAD51B 0 . . . 6.33 78.92 23 5 No 5 0.14 No 0 0 No -22 0.55 No 53 58.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56790341 + NM_058216 RAD51C 0 . . . 0.65 52.98 18 7.16 Yes 24 0.22 No 0 0 No -30 0.45 No 41 74.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7571045 - NM_000546 TP53 0 . . . 4.03 84.19 16 4.69 No 29 0.3 No 0 0 No -25 0.71 Yes 29 67.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68751608 + NM_133509 RAD51B 0 . . . 1.72 68.94 15 5.38 No 51 0.85 Yes 0 0 No -31 0.39 No 43 68.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56785298 + NM_058216 RAD51C 0 . . . 8.25 86.96 22 4.61 No 13 0.16 No 0 0 No -21 0.85 Yes 45 89.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215618916 - NM_000465 BARD1 0 . . . 1.59 70.78 22 4.98 No 72 0.34 No 0 0 No -21 0.89 Yes 43 63.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47658126 + NM_000251 MSH2 0 . . . 6.14 79.16 17 6.56 Yes 53 0.41 No 0 0 No -16 0.74 Yes 43 79.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68981537 + NM_133509 RAD51B 0 . . . 4.95 70.98 27 5.3 No 35 0.08 No 0 0 No -26 0.75 Yes 49 77.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68606510 + NM_133509 RAD51B 0 . . . 0.94 65.49 19 5.39 No 61 -5.67 No 0 0 No -27 0.68 Yes 37 94.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68501412 + NM_133509 RAD51B 0 . . . 9.15 89.27 37 6.16 Yes 15 0.74 No 0 0 No -36 0.68 Yes 43 50.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21991744 - NM_000077 CDKN2A 0 . . . 5.65 77.57 16 5.43 No 20 0.34 No 0 0 No -27 0.7 Yes 32 82.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131955192 + NM_005732 RAD50 0 . . . 2.8 77.82 18 5.38 No 9 0.06 No 0 0 No -28 0.87 Yes 49 68.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23653941 - NM_024675 PALB2 0 . . . 3.62 66.67 25 5 No 51 0.26 No 0 0 No -18 0.42 No 39 55.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84383360 - NM_139076 FAM175A 0 . . . 2.49 68.6 29 4.43 No 38 0.9 Yes 0 0 No -28 0.89 Yes 51 94.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190702980 + NM_000534 PMS1 0 . . . 4.67 85.57 21 6.64 Yes 62 -3.01 No 0 0 No -20 0.67 Yes 48 76.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68802084 + NM_004360 CDH1 0 . . . 2.99 0 18 5.48 No 57 0.98 Yes 0 0 No -27 0.56 No 55 21.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59812844 - NM_032043 BRIP1 0 . . . 1.02 78.43 18 5.81 Yes 73 0.75 No 0 0 No -27 0.59 No 49 75.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68772630 + NM_133509 RAD51B 0 . . . 7.92 89.11 30 4.8 No 6 1.07 Yes 0 0 No -29 0.37 No 49 74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69061576 + NM_133509 RAD51B 0 . . . 0.45 72.73 39 6.4 Yes 26 0.79 Yes 0 0 No -35 0.57 No 40 65.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108180331 + NM_000051 ATM 0 . . . 4.87 66.05 18 4.8 No 57 0.27 No 0 0 No -24 0.32 No 37 60.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68504148 + NM_133509 RAD51B 0 . . . 0.8 72.25 23 6.63 Yes 33 1.01 Yes 0 0 No -22 0.86 Yes 25 49.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47787269 + NM_000251 MSH2 0 . . . 4.46 73.02 20 4.79 No 61 0.55 No 0 0 No -19 0.46 No 44 56.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90964171 - NM_002485 NBN 0 . . . 2.16 81.76 28 4.07 No 54 0.86 Yes 0 0 No -53 0.52 No 48 75.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215645649 - NM_000465 BARD1 0 . . . 2.38 76.76 26 7.11 Yes 6 0.09 No 0 0 No -25 0.66 No 45 81.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68668770 + NM_133509 RAD51B 0 . . . 6.33 81.72 22 4.38 No 11 1.29 Yes 0 0 No -21 0.44 No 47 98.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105187209 + NM_021930 RINT1 0 . . . 0.17 74.68 28 5.29 No 55 0.64 No 0 0 No -21 0.38 No 36 54.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59773214 - NM_032043 BRIP1 0 . . . 3.31 77.32 19 5 No 12 0.26 No 0 0 No -51 0.53 No 46 83.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47711115 + NM_000251 MSH2 0 . . . 2.4 0 11 5.29 No 35 1.13 Yes 0 0 No -57 0.27 No 52 54.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32910839 + NM_000059 BRCA2 0 . . . 3.77 66.61 35 4.79 No 22 1.19 Yes 0 0 No -34 0.49 No 30 50.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190666632 + NM_000534 PMS1 0 . . . 6.1 68.21 18 4.8 No 6 0.44 No 0 0 No -41 0.56 No 39 47.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47718622 + NM_000251 MSH2 0 . . . 2.55 77.35 18 3.34 No 11 0.43 No 0 0 No -18 0.44 No 47 68.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41240766 - NM_007294 BRCA1 0 . . . 1.16 68.83 33 5.06 No 28 0.7 No 0 0 No -28 0.92 Yes 17 52.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23615743 - NM_024675 PALB2 0 . . . 2.42 0 21 5 No 0 1.48 Yes 0 0 No -20 0.73 Yes 58 41.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190714229 + NM_000534 PMS1 0 . . . 1.92 66.2 28 5.19 No 64 1.36 Yes 0 0 No -27 0.66 No 50 68.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68417730 + NM_133509 RAD51B 0 . . . 0.35 68.97 31 7.07 Yes 32 -3.73 No 0 0 No -30 0.81 Yes 45 44.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131962884 + NM_005732 RAD50 0 . . . 1.14 53.95 26 3.64 No 17 1.36 Yes 0 0 No -25 0.55 No 41 57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21980628 - NM_000077 CDKN2A 0 . . . 0.27 70.89 11 4.12 No 63 -4.94 No 0 0 No -24 0.64 No 38 76.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152350347 - NM_005431 XRCC2 0 . . . 4.67 75.98 19 4.69 No 55 -4.94 No 0 0 No -25 0.24 No 57 49.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7576260 - NM_000546 TP53 0 . . . 4.7 87 21 5.2 No 23 1.42 Yes 0 0 No -20 0.73 Yes 35 90.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68854144 + NM_133509 RAD51B 0 . . . 1.81 68.33 19 4.26 No 55 0.11 No 0 0 No -24 0.27 No 46 76.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215656842 - NM_000465 BARD1 0 . . . 2.65 71.31 24 3.69 No 9 0.73 No 0 0 No -45 0.86 Yes 45 47.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68786530 + NM_004360 CDH1 0 . . . 0.82 71.63 46 7.43 Yes 36 0.46 No 0 0 No -45 0.47 No 22 94.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32939977 + NM_000059 BRCA2 0 . . . 1.85 74.41 26 5.57 Yes 48 0.82 Yes 0 0 No -25 0.78 Yes 43 93.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47795768 + NM_000251 MSH2 0 . . . 6.99 75.64 35 7.53 Yes 75 -3.62 No 0 0 No -34 0.75 Yes 45 60.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137927 + NM_133509 RAD51B 0 . . . 1.82 0 26 6.56 Yes 42 0.6 No 0 0 No -25 0.78 Yes 16 45.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47740898 + NM_000251 MSH2 0 . . . 3.42 64.96 18 4.47 No 64 1.2 Yes 0 0 No -17 0.87 Yes 46 70.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47683813 + NM_000251 MSH2 0 . . . 0.02 0 33 10.29 Yes 41 1.47 Yes 0 0 No -28 0.62 No 43 77.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190719698 + NM_000534 PMS1 0 . . . 1.35 70.19 15 4.58 No -2 0.15 No 0 0 No -32 0.75 Yes 52 73.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41024252 + NM_001164269 RAD51 0 . . . 3.99 80.28 55 7.19 Yes 58 -3.98 No 0 0 No -28 0.8 Yes 55 49.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108137758 + NM_000051 ATM 0 . . . 6.76 80.23 21 5.16 No 58 0.98 Yes 0 0 No -20 0.86 Yes 55 31.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33439849 - NM_002878 RAD51D 0 . . . 1.17 0 15 5.19 No 59 -2.46 No 0 0 No -20 0.45 No 37 56.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68984509 + NM_133509 RAD51B 0 . . . 0.46 80.53 29 5.48 No 71 -2.62 No 0 0 No -28 0.93 Yes 50 72.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47739308 + NM_000251 MSH2 0 . . . 6.44 81.85 21 7.21 Yes 66 -1.34 No 0 0 No -20 0.74 Yes 41 57.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37075556 + NM_000249 MLH1 0 . . . 5.07 76.56 23 5.1 No 14 0.68 No 0 0 No -22 0.75 Yes 44 48.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69105641 + NM_133509 RAD51B 0 . . . 2.4 73.22 20 5.1 No 66 -5.15 No 0 0 No -58 0.26 No 46 55.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69139625 + NM_133509 RAD51B 0 . . . 2.36 73.32 13 5.21 No 52 0.81 Yes 0 0 No -19 0.35 No 43 78.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94185205 - NM_005591 MRE11 0 . . . 2.24 80.12 28 5.19 No 7 1.02 Yes 0 0 No -27 0.49 No 51 76.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32921412 + NM_000059 BRCA2 0 . . . 4.83 72.49 19 4.9 No 18 0.44 No 0 0 No -25 0.52 No 40 89.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69040454 + NM_133509 RAD51B 0 . . . 0.83 0 19 5 No 22 -3.09 No 0 0 No -18 0.55 No 56 50.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41253478 - NM_007294 BRCA1 0 . . . 1.69 74.68 13 4.79 No 30 0.65 No 0 0 No -12 0.35 No 46 60.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94212170 - NM_005591 MRE11 0 . . . 0.34 78.49 27 6.11 Yes 1 0.65 No 0 0 No -26 0.65 No 51 60.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896103 - NM_032043 BRIP1 0 . . . 5.28 80.55 29 4.03 No 76 0.75 No 0 0 No -23 0.5 No 44 56.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21992499 - NM_000077 CDKN2A 0 . . . 2.52 66.16 12 3.85 No 51 -5.29 No 0 0 No -28 0.42 No 60 33.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68663103 + NM_133509 RAD51B 0 . . . 7.34 76.1 21 5.5 No 47 0.14 No 0 0 No -25 0.7 Yes 46 84.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40985499 + NM_001164269 RAD51 0 . . . 3.75 84.95 31 5.93 Yes 33 1.45 Yes 0 0 No -30 0.51 No 25 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68701302 + NM_133509 RAD51B 0 . . . 4.14 70.38 15 4.58 No 38 -3.76 No 0 0 No -57 0.56 No 43 47.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68856537 + NM_133509 RAD51B 0 . . . 0.23 71.09 17 5.14 No 52 0.75 No 0 0 No -22 0.81 Yes 56 27.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47685053 + NM_000251 MSH2 0 . . . 7.06 93.17 34 7.06 Yes 9 1.29 Yes 0 0 No -33 0.67 Yes 49 90.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108214070 + NM_000051 ATM 0 . . . 0.58 69.72 28 5.74 Yes 46 0.45 No 0 0 No -28 0.49 No 53 47.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29088041 - NM_001005735 CHEK2 0 . . . 6.65 85.03 64 7.34 Yes 40 -3.77 No 0 0 No -29 0.72 Yes 51 59.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69046515 + NM_133509 RAD51B 0 . . . 3.18 76.99 24 6.08 Yes 51 0.37 No 0 0 No -23 0.56 No 10 33.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152365971 - NM_005431 XRCC2 0 . . . 1.67 69.36 20 5.57 Yes 54 1.9 Yes 0 0 No -19 0.58 No 60 25.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90985262 - NM_002485 NBN 0 . . . 4.05 67.95 26 4.19 No 67 -5.84 No 0 0 No -25 0.62 No 44 92.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108098697 + NM_000051 ATM 0 . . . 2.21 73.6 25 5.01 No 59 0.71 No 0 0 No -22 0.51 No 38 74.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69025996 + NM_133509 RAD51B 0 . . . 4.09 75.44 23 5.92 Yes 67 0.85 Yes 0 0 No -22 0.96 Yes 41 45.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68779590 + NM_133509 RAD51B 0 . . . 3.22 71.01 39 6.4 Yes 76 0.45 No 0 0 No -38 0.76 Yes 41 58.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131968158 + NM_005732 RAD50 0 . . . 0.07 0 12 5 No 72 1.3 Yes 0 0 No -26 0.75 Yes 37 71.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69056801 + NM_133509 RAD51B 0 . . . 4.98 73.17 14 5.74 Yes 73 1.92 Yes 0 0 No -23 0.62 No 51 66.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75479813 - NM_001040108 MLH3 0 . . . 2.85 83.61 38 7.3 Yes 70 0.69 No 0 0 No -26 0.77 Yes 47 59.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673526 + NM_000534 PMS1 0 . . . 6.34 76.44 27 4.94 No 24 1.39 Yes 0 0 No -26 0.87 Yes 34 77.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69066696 + NM_133509 RAD51B 0 . . . 2.36 68.3 14 4.47 No 10 1.41 Yes 0 0 No -7 0.36 No 48 89.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59815382 - NM_032043 BRIP1 0 . . . 0.93 73.15 28 3.91 No 66 0.92 Yes 0 0 No -28 0.76 Yes 41 80.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84405481 - NM_139076 FAM175A 0 . . . 0.65 76.49 78 9.16 Yes 37 -3.86 No 0 0 No -27 0.84 Yes 54 40.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84382726 - NM_139076 FAM175A 0 . . . 7.56 84.83 42 6.33 Yes 64 0.61 No 0 0 No -41 0.79 Yes 44 70.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68645874 + NM_133509 RAD51B 0 . . . 2.93 68.99 19 3.75 No 56 1.27 Yes 0 0 No -21 0.53 No 47 40.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90982376 - NM_002485 NBN 0 . . . 1.97 76.26 73 7.18 Yes 33 1.16 Yes 0 0 No -43 0.46 No 25 52.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23646966 - NM_024675 PALB2 0 . . . 7.11 83.71 30 6.51 Yes 1 1.11 Yes 0 0 No -29 0.75 Yes 48 31.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215624209 - NM_000465 BARD1 0 . . . 7.79 79.06 23 4.78 No 68 1.32 Yes 0 0 No -19 0.63 No 51 58.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47769830 + NM_000251 MSH2 0 . . . 5.37 76.63 21 4.8 No -3 0.86 Yes 0 0 No -20 0.96 Yes 20 89.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68657788 + NM_133509 RAD51B 0 . . . 5.3 79 13 5.2 No 68 -3.32 No 0 0 No -46 0.23 No 41 42.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131895520 + NM_005732 RAD50 0 . . . 4.97 74.12 40 6.4 Yes 73 0.46 No 0 0 No -34 0.66 No 36 65.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75493775 - NM_001040108 MLH3 0 . . . 3.1 84.79 21 4.9 No 2 1.51 Yes 0 0 No -20 0.58 No 44 48.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68963476 + NM_133509 RAD51B 0 . . . 2.5 75.18 21 5.17 No 37 -3.97 No 0 0 No -20 0.7 Yes 38 24.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59929601 - NM_032043 BRIP1 0 . . . 1.78 0 18 7 Yes 55 0.95 Yes 0 0 No -17 0.48 No 33 68.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131923112 + NM_005732 RAD50 0 . . . 2.37 0 19 5.48 No 5 1.37 Yes 0 0 No -23 0.52 No 43 85.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68704636 + NM_133509 RAD51B 0 . . . 2.95 79.93 31 6.28 Yes 7 1.31 Yes 0 0 No -30 0.83 Yes 51 77.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47767901 + NM_000251 MSH2 0 . . . 2.95 71.07 21 5.52 No 3 0.44 No 0 0 No -34 0.29 No 49 81.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68472544 + NM_133509 RAD51B 0 . . . 8.4 81.35 26 5 No 52 -4.42 No 0 0 No -25 0.72 Yes 50 80.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104162757 - NM_001100119 XRCC3 0 . . . 0.11 64.03 25 5.1 No 20 0.47 No 0 0 No -24 0.85 Yes 47 46.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41002192 + NM_001164269 RAD51 0 . . . 0.77 74.68 19 7.07 Yes 8 1.73 Yes 0 0 No -18 0.58 No 54 84.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131914166 + NM_005732 RAD50 0 . . . 11.23 77.47 26 5.37 No 17 1.05 Yes 0 0 No -25 0.94 Yes 41 76.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69145208 + NM_133509 RAD51B 0 . . . 6.37 82.24 32 6.65 Yes 68 0.46 No 0 0 No -31 0.6 No 41 90.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48015109 + NM_000179 MSH6 0 . . . 5.25 74.75 21 6.45 Yes 35 -2.22 No 0 0 No -25 0.55 No 40 52.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75516494 - NM_001040108 MLH3 0 . . . 3.41 77.08 23 5.93 Yes 47 1.04 Yes 0 0 No -31 0.8 Yes 44 67.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68435608 + NM_133509 RAD51B 0 . . . 7.31 89.09 25 5.38 No 44 0 No 0 0 No -22 0.64 No 50 73.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69116172 + NM_133509 RAD51B 0 . . . 4.45 74.9 18 4.8 No 47 2.01 Yes 0 0 No -37 0.48 No 23 60.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75512924 - NM_001040108 MLH3 0 . . . 2.63 67.69 36 6.77 Yes 69 -4.03 No 0 0 No -35 0.86 Yes 35 88.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59939288 - NM_032043 BRIP1 0 . . . 1.53 66.28 22 6.24 Yes -1 0.78 Yes 0 0 No -21 0.96 Yes 49 63.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94175434 - NM_005591 MRE11 0 . . . 9.41 84.06 45 7.23 Yes 29 1.73 Yes 0 0 No -37 0.41 No 44 92.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56813480 + NM_058216 RAD51C 0 . . . 3.62 87.34 15 5.2 No 27 0.45 No 0 0 No -14 0.54 No 49 59.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94165565 - NM_005591 MRE11 0 . . . 3.26 82.4 14 6.56 Yes 56 -3.45 No 0 0 No -27 0.2 No 48 41.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29128231 - NM_001005735 CHEK2 0 . . . 0.59 79.83 15 4.44 No 64 1.1 Yes 0 0 No -21 0.39 No 36 51.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47759873 + NM_000251 MSH2 0 . . . 7.19 77.82 35 6 Yes 72 0.8 Yes 0 0 No -29 0.81 Yes 49 73.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89628341 + NM_000314 PTEN 0 . . . 1.26 67.61 49 7.28 Yes 70 0.86 Yes 0 0 No -48 0.51 No 46 63.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190690189 + NM_000534 PMS1 0 . . . 6.55 73.12 26 5 No 11 0.88 Yes 0 0 No -25 0.72 Yes 47 95.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105205633 + NM_021930 RINT1 0 . . . 6.64 64.07 37 6.56 Yes 28 0.21 No 0 0 No -36 0.87 Yes 30 61.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32897173 + NM_000059 BRCA2 0 . . . 5.62 82.67 44 7.99 Yes 69 -1.69 No 0 0 No -20 0.69 Yes 43 75.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68375874 + NM_133509 RAD51B 0 . . . 2.05 77.28 10 4 No -1 0.8 Yes 0 0 No -25 0.43 No 55 52.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68692772 + NM_133509 RAD51B 0 . . . 1.08 72.54 15 4.2 No 7 0.99 Yes 0 0 No -25 0.6 No 43 94.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47717153 + NM_000251 MSH2 0 . . . 0.28 65.94 76 10.34 Yes 45 -4.67 No 0 0 No -21 0.92 Yes 49 83.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69116962 + NM_133509 RAD51B 0 . . . 4.85 77.63 30 4.48 No 24 1.13 Yes 0 0 No -29 0.75 Yes 44 80.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108231556 + NM_000051 ATM 0 . . . 0.25 67.08 16 6.49 Yes 76 -5.67 No 0 0 No -20 0.94 Yes 46 43.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23632279 - NM_024675 PALB2 0 . . . 2.19 77.28 25 5.11 No 18 0.68 No 0 0 No -20 0.61 No 35 31.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56791530 + NM_058216 RAD51C 0 . . . 2.24 80.12 14 4.9 No 7 1.16 Yes 0 0 No -44 0.62 No 51 78.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68742610 + NM_133509 RAD51B 0 . . . 3.7 71.21 25 5.48 No 23 1.57 Yes 0 0 No -24 0.7 Yes 35 91.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68858081 + NM_004360 CDH1 0 . . . 3.77 92.4 35 6.4 Yes 3 1.01 Yes 0 0 No -34 0.55 No 55 61.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41272416 - NM_007294 BRCA1 0 . . . 5.43 79.75 20 4.69 No 64 0.54 No 0 0 No -19 0.66 No 46 66.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215640832 - NM_000465 BARD1 0 . . . 2.11 66.95 40 5.8 Yes -3 0.38 No 0 0 No -39 0.62 No 45 55.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59878079 - NM_032043 BRIP1 0 . . . 1.43 67.25 25 5.3 No 38 1.5 Yes 0 0 No -24 0.7 Yes 32 93.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37034426 + NM_000249 MLH1 0 . . . 4 63.17 14 4.3 No 7 0.56 No 0 0 No -17 0.81 Yes 51 50.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69075899 + NM_133509 RAD51B 0 . . . 6.07 83.85 33 6.05 Yes 6 1.77 Yes 0 0 No -32 0.4 No 43 80.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90978157 - NM_002485 NBN 0 . . . 5.16 74.4 46 6.41 Yes 72 -6.22 No 0 0 No -40 0.32 No 38 62.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32936420 + NM_000059 BRCA2 0 . . . 1 81.72 24 6.17 Yes 22 0.72 No 0 0 No -23 0.79 Yes 50 75.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68535536 + NM_133509 RAD51B 0 . . . 6.04 76.56 26 5.45 No 2 0.65 No 0 0 No -52 0.33 No 28 69.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59797551 - NM_032043 BRIP1 0 . . . 1.6 64.09 25 5.9 Yes 58 0.97 Yes 0 0 No -24 0.83 Yes 41 78.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108181813 + NM_000051 ATM 0 . . . 1.19 81.72 18 4.69 No 33 0.96 Yes 0 0 No -21 0.45 No 50 76.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215605056 - NM_000465 BARD1 0 . . . 1.94 67.63 25 5 No 13 0.5 No 0 0 No -27 0.66 No 30 66.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89650243 + NM_000314 PTEN 0 . . . 2.2 0 24 6.16 Yes 30 0.91 Yes 0 0 No -23 0.57 No 53 51.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68610130 + NM_133509 RAD51B 0 . . . 3.38 70.19 63 5.5 No 31 0.74 No 0 0 No -55 0.48 No 46 45.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47713051 + NM_000251 MSH2 0 . . . 0.77 0 29 5.83 Yes 6 0.89 Yes 0 0 No -28 0.84 Yes 52 83.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32906687 + NM_000059 BRCA2 0 . . . 2.6 75.26 12 4.9 No 2 0.67 No 0 0 No -20 0.66 Yes 42 49.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32970916 + NM_000059 BRCA2 0 . . . 6.34 72.17 17 6.08 Yes 42 1.16 Yes 21 0.8 Yes -16 0.48 No 50 69.38 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 94160080 - NM_005591 MRE11 0 . . . 3.02 80.2 21 5.72 Yes 76 0.48 No 0 0 No -23 0.49 No 49 67.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75501192 - NM_001040108 MLH3 0 . . . 0.57 68.21 29 5.83 Yes 21 0.41 No 0 0 No -27 0.83 Yes 37 93.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68310474 + NM_133509 RAD51B 0 . . . 2.53 0 25 4.81 No 26 1.36 Yes 0 0 No -24 0.46 No 39 80.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1228352 + NM_000455 STK11 0 . . . 0.87 63.35 33 4 No 39 -4.15 No 0 0 No -33 0.4 No 61 22.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59919130 - NM_032043 BRIP1 0 . . . 3.18 79.43 39 5.48 No 72 -6.81 No 0 0 No -24 0.78 Yes 44 50.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47658700 + NM_000251 MSH2 0 . . . 1.55 79.37 21 5.49 No 7 0.93 Yes 0 0 No -37 0.56 No 51 83.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41261958 - NM_007294 BRCA1 0 . . . 2.39 76.63 21 4.36 No 67 -4.97 No 0 0 No -43 0.79 Yes 43 73.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59809877 - NM_032043 BRIP1 0 . . . 0.01 67.74 22 5.29 No 39 -4.04 No 0 0 No -21 0.72 Yes 47 45.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215596359 - NM_000465 BARD1 0 . . . 0.01 71.41 31 6.59 Yes 75 -3.25 No 0 0 No -30 0.49 No 47 44.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94161928 - NM_005591 MRE11 0 . . . 1.08 84.22 22 4.93 No 33 0.98 Yes 0 0 No -21 0.58 No 25 57.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108222772 + NM_000051 ATM 0 . . . 0.99 69.84 22 5.91 Yes -2 0.66 No 0 0 No -21 0.64 No 49 51.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68883085 + NM_133509 RAD51B 0 . . . 8.83 79.63 21 5.9 Yes 57 1.96 Yes 0 0 No -21 0.47 No 45 65.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131974231 + NM_005732 RAD50 0 . . . 3.49 77.98 21 5.07 No 1 0.52 No 0 0 No -20 0.65 No 46 62.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37062420 + NM_000249 MLH1 0 . . . 4.27 81.11 21 4.9 No 21 1.28 Yes 0 0 No -20 0.87 Yes 37 72.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68804663 + NM_133509 RAD51B 0 . . . 1.45 0 33 7.4 Yes 2 0.77 Yes 0 0 No -32 0.75 Yes 56 50.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59896301 - NM_032043 BRIP1 0 . . . 3.3 68.34 15 4.41 No 23 1.64 Yes 0 0 No -32 0.61 No 35 73.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59808456 - NM_032043 BRIP1 0 . . . 4.17 90.86 29 6.24 Yes 7 0.58 No 0 0 No -32 0.55 No 31 48.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68802412 + NM_133509 RAD51B 0 . . . 0.91 73.12 31 5.48 No 13 0.77 Yes 0 0 No -16 0.32 No 45 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215604049 - NM_000465 BARD1 0 . . . 2.35 0 33 6.83 Yes 22 1.05 Yes 0 0 No -32 0.76 Yes 49 72.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68809552 + NM_133509 RAD51B 0 . . . 6.96 80.35 21 5.65 Yes 73 0.68 No 0 0 No -20 0.65 No 44 95.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68535727 + NM_133509 RAD51B 0 . . . 9.3 88.18 24 4.41 No 19 1.26 Yes 0 0 No -23 0.92 Yes 39 95.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68659858 + NM_133509 RAD51B 0 . . . 4.36 79.39 11 4.12 No 31 1.55 Yes 0 0 No -23 0.56 No 41 59.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68780203 + NM_133509 RAD51B 0 . . . 5.08 74.31 22 4.58 No 72 1.08 Yes 0 0 No -21 0.66 No 43 48.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68358646 + NM_133509 RAD51B 0 . . . 1.51 70.75 28 6.24 Yes 1 0.49 No 0 0 No -27 0.82 Yes 48 84.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69073909 + NM_133509 RAD51B 0 . . . 1.18 0 73 7.13 Yes -1 0.31 No 0 0 No -29 0.84 Yes 45 32.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215633735 - NM_000465 BARD1 0 . . . 0.26 0 35 6.08 Yes 61 0.55 No 0 0 No -34 0.66 No 49 85.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33436271 - NM_002878 RAD51D 0 . . . 2.3 66.32 63 7.06 Yes 44 -2.56 No 0 0 No -34 0.64 No 45 90.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47696289 + NM_000251 MSH2 0 . . . 3.33 82.14 22 6.85 Yes 19 -1.92 No 0 0 No -21 0.97 Yes 44 41.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68561091 + NM_133509 RAD51B 0 . . . 3.74 73.81 29 6.23 Yes 58 0.78 Yes 0 0 No -24 0.82 Yes 48 81.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68622092 + NM_133509 RAD51B 0 . . . 6.67 83.82 18 4.88 No 73 1.17 Yes 0 0 No -20 0.52 No 52 80.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48034339 + NM_000179 MSH6 0 . . . 3.52 82.03 29 6.4 Yes 17 0.18 No 0 0 No -28 0.67 Yes 40 57.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68588052 + NM_133509 RAD51B 0 . . . 0.85 0 14 2.5 No 13 0.2 No 0 0 No -18 0.52 No 42 92.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7586548 - NM_000546 TP53 0 . . . 2.05 74.68 17 3.7 No 64 0.94 Yes 0 0 No -16 0.59 No 37 61.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94208721 - NM_005591 MRE11 0 . . . 5.29 81.25 29 6.85 Yes -2 0.19 No 0 0 No -28 0.88 Yes 45 63.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68397364 + NM_133509 RAD51B 0 . . . 5.5 83.21 13 3.82 No 68 0.84 Yes 0 0 No -34 0.4 No 37 70.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59796357 - NM_032043 BRIP1 0 . . . 3.14 71.85 55 8.03 Yes -1 0.17 No 0 0 No -31 0.54 No 37 49.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849270 - NM_032043 BRIP1 0 . . . 0.46 74.02 17 4.58 No 28 1.46 Yes 0 0 No -17 0.44 No 54 61.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68297077 + NM_133509 RAD51B 0 . . . 3.68 83.25 24 4.17 No 35 -2.82 No 0 0 No -23 0.83 Yes 45 90.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32901303 + NM_000059 BRCA2 0 . . . 6.2 87.52 36 4.74 No 33 1.2 Yes 0 0 No -35 0.61 No 43 31.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131905779 + NM_005732 RAD50 0 . . . 3.56 74.17 26 4.53 No 72 -5.74 No 0 0 No -26 0.64 No 46 56.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68484794 + NM_133509 RAD51B 0 . . . 1.4 51.72 30 5.43 No 13 1.14 Yes 0 0 No -29 0.47 No 45 63.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59862446 - NM_032043 BRIP1 0 . . . 0.34 75.22 29 6.32 Yes 6 0.38 No 0 0 No -28 0.9 Yes 41 85.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68856853 + NM_004360 CDH1 0 . . . 6.29 81.8 17 3.9 No 58 0.47 No 0 0 No -22 0.64 No 46 88.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68676697 + NM_133509 RAD51B 0 . . . 2.2 84.41 45 7.03 Yes 31 0.43 No 0 0 No -44 0.65 No 42 84.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215629201 - NM_000465 BARD1 0 . . . 4.07 80.84 16 5.18 No 31 1.02 Yes 0 0 No -21 0.58 No 47 69.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108139259 + NM_000051 ATM 0 . . . 2.69 0 16 4.69 No 25 1.05 Yes 0 0 No -20 0.58 No 43 91.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89660528 + NM_000314 PTEN 0 . . . 1.83 62.72 22 5.22 No 57 0.79 Yes 0 0 No -22 0.61 No 36 67.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68593689 + NM_133509 RAD51B 0 . . . 4.44 65.33 21 6.05 Yes 37 0.54 No 0 0 No -24 0.63 No 46 38.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32919317 + NM_000059 BRCA2 0 . . . 3.33 74.19 19 5 No 18 0.68 No 0 0 No -18 0.29 No 40 76.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59832641 - NM_032043 BRIP1 0 . . . 0.84 70.46 61 6.96 Yes 47 0.69 No 0 0 No -20 0.2 No 48 77.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215623399 - NM_000465 BARD1 0 . . . 11.49 92.33 34 9.6 Yes -4 0.28 No 0 0 No -26 0.76 Yes 42 73.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215609324 - NM_000465 BARD1 0 . . . 6.38 68.55 40 6.39 Yes 8 0.78 Yes 0 0 No -23 0.33 No 50 70.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68367929 + NM_133509 RAD51B 0 . . . 1.74 69.84 16 4.69 No 0 1.38 Yes 0 0 No -19 0.83 Yes 37 56.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59875815 - NM_032043 BRIP1 0 . . . 0.83 62.99 16 8.08 Yes 64 0.67 No 0 0 No -31 0.95 Yes 42 43.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68379467 + NM_133509 RAD51B 0 . . . 2.71 84.79 14 5.96 Yes 2 1.51 Yes 0 0 No -29 0.65 No 26 59.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131940297 + NM_005732 RAD50 0 . . . 1.47 66.16 23 5.1 No 8 1.01 Yes 0 0 No -22 0.83 Yes 40 61.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84398080 - NM_139076 FAM175A 0 . . . 2.58 86.51 15 4.24 No 53 0.24 No 0 0 No -17 0.38 No 54 33.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29084630 - NM_001005735 CHEK2 0 . . . 4.59 84.87 30 5.61 Yes 68 1.02 Yes 0 0 No -29 0.44 No 44 61.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108226390 + NM_000051 ATM 0 . . . 1.11 62.87 16 6 Yes 36 1.16 Yes 0 0 No -29 0.42 No 38 75.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47788361 + NM_000251 MSH2 0 . . . 1.52 83.38 53 4.87 No 70 1.52 Yes 0 0 No -26 0.58 No 15 40.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75488356 - NM_001040108 MLH3 0 . . . 4.09 85.14 18 6.47 Yes 24 1.51 Yes 0 0 No -25 0.48 No 38 62.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68834793 + NM_133509 RAD51B 0 . . . 1.43 0 33 5.78 Yes 70 0.43 No 0 0 No -32 0.36 No 46 41.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68546296 + NM_133509 RAD51B 0 . . . 2.85 64.33 28 8.14 Yes 56 0.71 No 0 0 No -27 0.85 Yes 47 86.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68941339 + NM_133509 RAD51B 0 . . . 0.5 67.67 23 4.8 No 11 1.13 Yes 0 0 No -22 0.92 Yes 14 46.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105195268 + NM_021930 RINT1 0 . . . 2.97 0 10 4.87 No 48 0.46 No 0 0 No -24 0.53 No 50 67.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68856180 + NM_133509 RAD51B 0 . . . 7.3 76.86 22 4.29 No -4 0.82 Yes 0 0 No -21 0.71 Yes 48 81.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68757859 + NM_133509 RAD51B 0 . . . 3.56 72.13 21 5.13 No 14 -3.11 No 0 0 No -26 0.86 Yes 45 56.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41264544 - NM_007294 BRCA1 0 . . . 1.6 63.13 19 4.69 No 15 0.58 No 0 0 No -18 0.91 Yes 43 79.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68875241 + NM_133509 RAD51B 0 . . . 4.21 73.1 21 4.58 No 1 1.18 Yes 0 0 No -36 0.22 No 45 62.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68426688 + NM_133509 RAD51B 0 . . . 1.27 74.68 32 5.73 Yes 58 0.64 No 0 0 No -31 0.63 No 33 68.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59859255 - NM_032043 BRIP1 0 . . . 4.18 81.68 27 5.74 Yes 40 0.3 No 0 0 No -26 0.91 Yes 18 87.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94177600 - NM_005591 MRE11 0 . . . 1.24 68.96 35 5.83 Yes 41 1.26 Yes 0 0 No -48 0.36 No 17 80.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68886028 + NM_133509 RAD51B 0 . . . 1.23 71.72 19 5.36 No 30 1.29 Yes 0 0 No -29 0.57 No 39 61.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29099245 - NM_001005735 CHEK2 0 . . . 4.9 81.35 30 6.48 Yes 3 0.21 No 0 0 No -32 0.47 No 50 55.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45796564 - NM_001048171 MUTYH 0 . . . 0.7 73.67 35 6.11 Yes 33 1.16 Yes 0 0 No -34 0.77 Yes 25 53.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47671166 + NM_000251 MSH2 0 . . . 2.43 79.56 30 5.65 Yes 5 0.69 No 0 0 No -30 0.68 Yes 44 36.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47650022 + NM_000251 MSH2 0 . . . 3.82 76.91 22 5.62 Yes 12 0.44 No 0 0 No -21 0.77 Yes 38 50.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152369991 - NM_005431 XRCC2 0 . . . 4.56 79.9 21 5.51 No 13 0.63 No 0 0 No -20 0.56 No 41 73.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69121367 + NM_133509 RAD51B 0 . . . 7.06 85.16 18 4.69 No 50 0.14 No 0 0 No -25 0.75 Yes 36 72.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68431318 + NM_133509 RAD51B 0 . . . 3.55 0 22 4.88 No 43 1.12 Yes 0 0 No -24 0.69 Yes 15 60.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108192857 + NM_000051 ATM 0 . . . 4.35 71.53 23 3.74 No 71 0.57 No 0 0 No -39 0.73 Yes 42 56.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89732763 + NM_000314 PTEN 0 . . . 5.23 72.77 16 5.39 No 18 0.77 No 0 0 No -22 0.53 No 47 54.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215631777 - NM_000465 BARD1 0 . . . 3.41 74.15 23 5.39 No -3 0.42 No 0 0 No -22 0.76 Yes 45 38.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190668013 + NM_000534 PMS1 0 . . . 3.21 68.09 38 6.24 Yes 22 1.13 Yes 0 0 No -25 0.66 Yes 36 73.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89674834 + NM_000314 PTEN 0 . . . 3.25 80.12 25 5.47 No 8 1.2 Yes 0 0 No -24 0.77 Yes 50 88.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94223454 - NM_005591 MRE11 0 . . . 1.31 75.11 17 4 No 61 -5.25 No 0 0 No -33 0.91 Yes 42 49.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68897584 + NM_133509 RAD51B 0 . . . 5.23 87.9 15 6.01 Yes 65 -0.87 No 0 0 No -27 0.39 No 53 47.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90962399 - NM_002485 NBN 0 . . . 3.52 81.09 32 6.23 Yes 36 -2.82 No 0 0 No -31 0.79 Yes 48 81.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59875328 - NM_032043 BRIP1 0 . . . 2.61 75.26 23 4.23 No 3 0.27 No 0 0 No -22 0.86 Yes 55 60.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68332584 + NM_133509 RAD51B 0 . . . 3.8 71.53 25 5.2 No 16 0.89 Yes 0 0 No -24 0.85 Yes 42 83.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90988152 - NM_002485 NBN 0 . . . 5.01 80.83 19 4.84 No 65 1.55 Yes 0 0 No -25 0.78 Yes 46 90.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89631631 + NM_000314 PTEN 0 . . . 1.45 0 24 5.29 No 24 1.13 Yes 0 0 No -21 0.62 No 50 66.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94221078 - NM_005591 MRE11 0 . . . 1.22 69.92 61 8.79 Yes 31 1.21 Yes 0 0 No -26 0.61 No 27 61.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68788440 + NM_004360 CDH1 0 . . . 6.79 82.04 22 4.93 No 31 0.83 Yes 0 0 No -21 0.58 No 27 64.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69101481 + NM_133509 RAD51B 0 . . . 3.16 74.89 19 4.89 No 73 -3.27 No 0 0 No -22 0.38 No 61 28.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37053828 + NM_000249 MLH1 0 . . . 7.76 86.22 32 5.92 Yes 74 0.88 Yes 0 0 No -31 0.45 No 45 53.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68516844 + NM_133509 RAD51B 0 . . . 11.04 95.3 22 4.69 No 69 1.17 Yes 0 0 No -21 0.8 Yes 38 80.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41204035 - NM_007294 BRCA1 0 . . . 0.35 62.41 15 4.58 No 76 0.78 Yes 0 0 No -53 0.4 No 46 54.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56774183 + NM_058216 RAD51C 0 . . . 6.22 78.26 17 5.38 No 47 0.08 No 0 0 No -22 0.36 No 47 82.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33438846 - NM_002878 RAD51D 0 . . . 1.11 73.62 17 6.78 Yes 12 0.82 Yes 0 0 No -30 0.63 No 46 80.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68436928 + NM_133509 RAD51B 0 . . . 2.76 88.38 45 7.21 Yes 60 2.17 Yes 0 0 No -29 0.73 Yes 41 42.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68379604 + NM_133509 RAD51B 0 . . . 4.93 85.02 15 4.1 No 4 1.2 Yes 0 0 No -18 0.89 Yes 54 64.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108179218 + NM_000051 ATM 0 . . . 4.68 73 17 4.79 No 28 0.99 Yes 0 0 No -51 0.69 Yes 30 76.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29133005 - NM_001005735 CHEK2 0 . . . 6.16 70.66 19 5 No 47 0.2 No 0 0 No -18 0.85 Yes 28 20.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89643754 + NM_000314 PTEN 0 . . . 2.28 75.16 17 5.57 Yes 31 0.87 Yes 0 0 No -16 0.68 Yes 51 17.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68672724 + NM_133509 RAD51B 0 . . . 5.24 0 27 5.57 Yes 70 1.25 Yes 0 0 No -17 0.47 No 45 78.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68861725 + NM_133509 RAD51B 0 . . . 4.83 76.26 29 5.39 No 70 -1.93 No 0 0 No -25 0.28 No 46 81.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131935889 + NM_005732 RAD50 0 . . . 1.16 0 21 5.74 Yes 6 1.04 Yes 0 0 No -20 0.78 Yes 52 92.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32939728 + NM_000059 BRCA2 0 . . . 0.76 74.26 15 5.83 Yes 19 -3.36 No 0 0 No -14 0.4 No 20 60.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32909840 + NM_000059 BRCA2 0 . . . 4.3 76.7 15 5.5 No 74 0.68 No 0 0 No -22 0.56 No 51 63.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89680858 + NM_000314 PTEN 0 . . . 0.92 78.08 21 5.2 No 40 0.08 No 0 0 No -20 0.88 Yes 46 55.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108240130 + NM_000051 ATM 0 . . . 1.1 72.01 14 6.93 Yes -2 0.96 Yes 0 0 No -39 0.46 No 51 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56802429 + NM_058216 RAD51C 0 . . . 4.9 71.11 19 4.8 No -3 0.59 No 0 0 No -58 0.63 No 35 80.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68853875 + NM_133509 RAD51B 0 . . . 4.31 77.17 22 3.4 No 57 2.22 Yes 0 0 No -26 0.83 Yes 46 65.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59847790 - NM_032043 BRIP1 0 . . . 4.51 72.84 19 5 No 0 0.71 No 0 0 No -45 0.62 No 45 37.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68360739 + NM_133509 RAD51B 0 . . . 4.25 67.79 35 3.7 No 74 0.64 No 0 0 No -29 0.75 Yes 51 61.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75514261 - NM_001040108 MLH3 0 . . . 0.84 0 30 6.67 Yes 49 -2.53 No 0 0 No -29 0.89 Yes 43 95.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215635096 - NM_000465 BARD1 0 . . . 3.03 68.55 17 5.46 No 49 1.14 Yes 0 0 No -28 0.41 No 47 74.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68836182 + NM_133509 RAD51B 0 . . . 7.58 80.59 19 5.48 No 17 0.4 No 0 0 No -18 0.57 No 45 76.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69144715 + NM_133509 RAD51B 0 . . . 6.7 90.75 29 4.96 No 14 0.09 No 0 0 No -32 0.54 No 47 56.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32975584 + NM_000059 BRCA2 0 . . . 0.95 67.53 33 4.72 No 50 0.04 No 0 0 No -24 0.56 No 53 46.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68457193 + NM_133509 RAD51B 0 . . . 9.42 87.3 9 4.58 No 32 1.39 Yes 0 0 No -53 0.73 Yes 26 49.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32925145 + NM_000059 BRCA2 0 . . . 0.12 0 29 5.28 No 10 0.37 No 0 0 No -26 0.68 Yes 48 58.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190723000 + NM_000534 PMS1 0 . . . 3.8 69.09 20 5.88 Yes 35 -2.16 No 0 0 No -26 0.89 Yes 50 50.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94223824 - NM_005591 MRE11 0 . . . 3.7 68.75 16 5.57 Yes 61 1.32 Yes 0 0 No -26 0.84 Yes 40 84.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69087211 + NM_133509 RAD51B 0 . . . 0.62 77.56 15 5 No 4 0.11 No 0 0 No -18 0.47 No 46 56.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68683880 + NM_133509 RAD51B 0 . . . 5.43 70.82 28 5.25 No 56 1.07 Yes 0 0 No -27 0.58 No 39 70.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68502176 + NM_133509 RAD51B 0 . . . 2.72 69.5 24 5.28 No 4 0.23 No 0 0 No -24 0.5 No 45 39.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37037869 + NM_000249 MLH1 0 . . . 9.47 79.07 37 3.92 No 11 1.13 Yes 0 0 No -24 0.85 Yes 47 62.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190687673 + NM_000534 PMS1 0 . . . 0.45 63.24 19 4.69 No 59 1.02 Yes 0 0 No -41 0.59 No 56 45.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89636176 + NM_000314 PTEN 0 . . . 4.32 67.27 23 6.76 Yes 27 0.79 Yes 0 0 No -22 0.57 No 35 82.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68871038 + NM_133509 RAD51B 0 . . . 3.39 76.11 14 4.42 No 20 0.42 No 0 0 No -19 0.69 Yes 46 63.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59908153 - NM_032043 BRIP1 0 . . . 3.8 75.83 24 4.9 No 15 1.26 Yes 0 0 No -23 0.64 No 32 69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68747411 + NM_133509 RAD51B 0 . . . 2.83 65.31 20 5.51 No 72 0.35 No 0 0 No -19 0.63 No 52 66.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69077822 + NM_133509 RAD51B 0 . . . 4.22 70.1 26 6.72 Yes 30 1.32 Yes 0 0 No -29 0.68 Yes 28 60.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68825330 + NM_133509 RAD51B 0 . . . 4.39 71.06 40 6.31 Yes 70 1.17 Yes 0 0 No -24 0.56 No 35 88.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37087225 + NM_000249 MLH1 0 . . . 3.01 0 21 5 No 76 2.12 Yes 0 0 No -20 0.75 Yes 31 93.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68752737 + NM_133509 RAD51B 0 . . . 3.17 84.14 17 4.8 No 0 0.88 Yes 0 0 No -23 0.34 No 49 79.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69050445 + NM_133509 RAD51B 0 . . . 0.07 66.73 15 5.75 Yes 13 0.15 No 0 0 No -26 0.69 Yes 45 35.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68490228 + NM_133509 RAD51B 0 . . . 2.24 80.12 21 4.67 No 7 1.16 Yes 0 0 No -42 0.6 No 51 81.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68822483 + NM_133509 RAD51B 0 . . . 1.39 0 34 6.32 Yes 45 0.05 No 0 0 No -33 0.54 No 46 53.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69120296 + NM_133509 RAD51B 0 . . . 1.92 69.31 26 4.27 No 68 -2.47 No 0 0 No -25 0.79 Yes 48 58.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68371716 + NM_133509 RAD51B 0 . . . 3.37 80.31 30 5.53 No 72 0.81 Yes 0 0 No -29 0.71 Yes 41 93.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190724342 + NM_000534 PMS1 0 . . . 0.18 70.17 26 6.19 Yes 18 0.35 No 0 0 No -25 0.87 Yes 40 38.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108117046 + NM_000051 ATM 0 . . . 1.5 73.99 15 4.58 No 45 1.69 Yes 0 0 No -22 0.49 No 44 88.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21980931 - NM_000077 CDKN2A 0 . . . 3.46 84.95 39 5.88 Yes 14 -0.18 No 0 0 No -22 0.63 No 22 40.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41198552 - NM_007294 BRCA1 0 . . . 2.9 64.84 13 3.33 No 34 -2.47 No 0 0 No -17 0.61 No 42 46.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40996434 + NM_001164269 RAD51 0 . . . 1.77 69.04 19 5 No 52 0.04 No 0 0 No -18 0.6 No 48 73.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94188653 - NM_005591 MRE11 0 . . . 4.31 72.29 19 5.18 No 20 0.64 No 0 0 No -26 0.36 No 47 59.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32905545 + NM_000059 BRCA2 0 . . . 0.8 78.09 43 5.72 Yes 9 0.65 No 0 0 No -42 0.69 Yes 49 53.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68570678 + NM_133509 RAD51B 0 . . . 4.04 85.27 24 6.85 Yes 54 0.18 No 0 0 No -23 0.93 Yes 46 70.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69142063 + NM_133509 RAD51B 0 . . . 3.8 75.68 30 5.66 Yes 43 -4.03 No 0 0 No -29 0.54 No 47 60.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89730025 + NM_000314 PTEN 0 . . . 0.36 71.32 9 4.64 No 71 -4.12 No 0 0 No -53 0.64 No 45 75.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89658683 + NM_000314 PTEN 0 . . . 4.28 0 32 5.09 No 15 0.17 No 0 0 No -24 0.6 No 49 38.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68609992 + NM_133509 RAD51B 0 . . . 5.11 75.2 24 6.02 Yes -3 0.4 No 0 0 No -23 0.82 Yes 49 55.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75485649 - NM_001040108 MLH3 0 . . . 0.6 0 25 4.75 No 50 1.63 Yes 0 0 No -24 0.66 No 50 61.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68725682 + NM_133509 RAD51B 0 . . . 0.12 0 14 4.43 No 4 0.54 No 0 0 No -35 0.74 Yes 54 81.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108103708 + NM_000051 ATM 0 . . . 1.86 83.16 70 8.54 Yes 33 1.12 Yes 0 0 No -31 0.17 No 50 64.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69078935 + NM_133509 RAD51B 0 . . . 1.83 60.08 30 5.39 No 36 0.47 No 0 0 No -26 0.49 No 47 55.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32931204 + NM_000059 BRCA2 0 . . . 2.77 0 28 5.83 Yes 6 1.08 Yes 0 0 No -27 0.68 Yes 52 88.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68612804 + NM_133509 RAD51B 0 . . . 0.41 69.66 18 4.22 No 19 -2.1 No 0 0 No -17 0.55 No 57 52.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47643596 + NM_000251 MSH2 0 . . . 2.38 73.65 22 4.9 No 66 -4.11 No 0 0 No -21 0.74 Yes 49 74.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68815770 + NM_004360 CDH1 0 . . . 7.63 79.45 27 6.55 Yes -4 0.69 No 0 0 No -26 0.93 Yes 46 52.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75484073 - NM_001040108 MLH3 0 . . . 4.02 80.12 19 4.3 No 11 1.3 Yes 0 0 No -18 0.74 Yes 47 92.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68568585 + NM_133509 RAD51B 0 . . . 5.2 67.62 17 5.75 Yes 67 -2.1 No 0 0 No -27 0.5 No 45 63.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75513544 - NM_001040108 MLH3 0 . . . 4.67 71.85 13 4.26 No 58 0.93 Yes 23 0.71 Yes -26 0.86 Yes 44 41.68 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr2 48018801 + NM_000179 MSH6 0 . . . 3.46 70.6 19 6.41 Yes 25 0.52 No 0 0 No -25 0.47 No 48 67.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152360055 - NM_005431 XRCC2 0 . . . 1.51 76.51 26 6.24 Yes 72 0.51 No 0 0 No -25 0.86 Yes 46 75.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94190877 - NM_005591 MRE11 0 . . . 1.45 63.6 17 4.69 No 42 1.08 Yes 0 0 No -21 0.4 No 16 39.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68545952 + NM_133509 RAD51B 0 . . . 6.34 82.79 17 6.32 Yes 60 0.72 No 0 0 No -22 0.81 Yes 28 57.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68669834 + NM_133509 RAD51B 0 . . . 3.68 66.17 28 4.6 No 37 1.48 Yes 0 0 No -27 0.6 No 46 43.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190701883 + NM_000534 PMS1 0 . . . 0.56 70.12 14 4.89 No 61 0.55 No 0 0 No -20 0.8 Yes 44 71.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215593513 - NM_000465 BARD1 0 . . . 2.34 73.17 34 6.29 Yes 24 0.96 Yes 0 0 No -21 0.49 No 48 57.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68465639 + NM_133509 RAD51B 0 . . . 0.1 63.6 14 4.38 No 74 0.81 Yes 0 0 No -19 0.87 Yes 52 79.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69024846 + NM_133509 RAD51B 0 . . . 0.63 0 40 7.02 Yes 23 0.97 Yes 0 0 No -39 0.46 No 53 15.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84396878 - NM_139076 FAM175A 0 . . . 1.51 68.08 28 5.83 Yes 69 -3.47 No 0 0 No -27 0.77 Yes 46 40.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69121290 + NM_133509 RAD51B 0 . . . 9.25 83.84 16 5.83 Yes 42 1.48 Yes 0 0 No -15 0.29 No 38 64.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215598083 - NM_000465 BARD1 0 . . . 4.61 74.29 10 4 No 51 -2.57 No 0 0 No -28 0.84 Yes 33 31.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21991983 - NM_000077 CDKN2A 0 . . . 1.7 63.8 21 5.74 Yes 24 0.47 No 0 0 No -20 0.77 Yes 34 67.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69056501 + NM_133509 RAD51B 0 . . . 7.5 84.54 29 5.66 Yes 72 0.24 No 0 0 No -29 0.33 No 43 87.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68569197 + NM_133509 RAD51B 0 . . . 3.24 79.95 25 5.08 No 44 -2.77 No 0 0 No -24 0.89 Yes 51 77.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68872792 + NM_133509 RAD51B 0 . . . 1.7 61.04 17 4.8 No 31 0.32 No 0 0 No -16 0.59 No 51 61.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68691269 + NM_133509 RAD51B 0 . . . 5.19 82.82 52 6.31 Yes 8 0.65 No 0 0 No -29 0.59 No 39 53.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68542035 + NM_133509 RAD51B 0 . . . 7.27 89.29 26 6.34 Yes 10 0.6 No 0 0 No -29 0.75 Yes 48 96.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68733282 + NM_133509 RAD51B 0 . . . 5.87 71.72 25 5.47 No 24 1.71 Yes 0 0 No -24 0.91 Yes 34 94.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131970335 + NM_005732 RAD50 0 . . . 5.11 0 28 6.78 Yes 19 0.46 No 0 0 No -27 0.81 Yes 41 68.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6039497 - NM_000535 PMS2 0 . . . 2.06 72.84 42 6.62 Yes 50 0.78 Yes 0 0 No -42 0.54 No 45 44.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37072440 + NM_000249 MLH1 0 . . . 0.49 0 31 6.05 Yes 37 0.34 No 0 0 No -30 0.87 Yes 54 84.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90953272 - NM_002485 NBN 0 . . . 7.04 82.24 48 6.86 Yes 38 0.92 Yes 0 0 No -26 0.75 Yes 35 65.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131966571 + NM_005732 RAD50 0 . . . 0.15 68.37 59 7.57 Yes 40 1.28 Yes 0 0 No -25 0.46 No 18 71.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23648405 - NM_024675 PALB2 0 . . . 3.6 85.02 35 6.32 Yes 4 1.05 Yes 0 0 No -34 0.86 Yes 54 72.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152356802 - NM_005431 XRCC2 0 . . . 3.4 81.14 26 5.2 No 23 -1.58 No 0 0 No -25 0.54 No 23 29.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47803103 + NM_000251 MSH2 0 . . . 3.23 83.31 32 6 Yes 52 -4.6 No 0 0 No -31 0.78 Yes 52 49.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59881636 - NM_032043 BRIP1 0 . . . 0.01 51.44 28 5.29 No 2 -2.46 No 0 0 No -52 0.27 No 34 22.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108179461 + NM_000051 ATM 0 . . . 2.38 64.21 26 5.09 No 64 -3.95 No 0 0 No -25 0.64 No 46 76.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68753961 + NM_133509 RAD51B 0 . . . 3.84 76.18 29 5.47 No 18 0.69 No 0 0 No -28 0.71 Yes 39 74.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68872518 + NM_133509 RAD51B 0 . . . 10.65 82.2 16 5.09 No 12 0.76 No 0 0 No -20 0.84 Yes 46 80.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68506820 + NM_133509 RAD51B 0 . . . 1.34 62.82 24 3.71 No 39 0.12 No 0 0 No -23 0.72 Yes 44 84.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69056365 + NM_133509 RAD51B 0 . . . 3.79 82.12 10 5.2 No -1 0.5 No 0 0 No -22 0.54 No 52 43.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68287882 + NM_133509 RAD51B 0 . . . 1.54 66.83 16 3.87 No 51 1.57 Yes 0 0 No -25 0.75 Yes 55 39.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90983369 - NM_002485 NBN 0 . . . 1.31 75.68 22 6.02 Yes 1 0.66 No 0 0 No -21 0.55 No 44 42.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47730456 + NM_000251 MSH2 0 . . . 8.79 83.2 21 4.9 No NA NA NA 0 0 No -20 0.51 No 42 63.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89625148 + NM_000314 PTEN 0 . . . 1.78 68.34 41 6.03 Yes -4 0.59 No 0 0 No -37 0.43 No 49 63.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69105083 + NM_133509 RAD51B 0 . . . 0.22 66.63 28 5.2 No 20 1.06 Yes 0 0 No -27 0.45 No 61 34.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75482836 - NM_001040108 MLH3 0 . . . 3.67 75.55 16 5.08 No 8 -1.4 No 0 0 No -19 0.52 No 28 72.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52433551 - NM_004656 BAP1 0 . . . 1.62 66.59 29 5.92 Yes 62 0.02 No 0 0 No -28 0.72 Yes 35 56.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89684072 + NM_000314 PTEN 0 . . . 3.22 72.35 29 5.32 No 12 0.13 No 0 0 No -28 0.79 Yes 46 75.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6047149 - NM_000535 PMS2 0 . . . 0.72 79.96 14 5.47 No 60 0.41 No 0 0 No -29 0.37 No 50 76.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68528063 + NM_133509 RAD51B 0 . . . 5.04 89.95 28 6.13 Yes 27 0.75 No 0 0 No -27 0.87 Yes 52 23.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1215830 + NM_000455 STK11 0 . . . 6.5 86.2 36 5.35 No 21 0.29 No 0 0 No -30 0.84 Yes 37 62.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59801200 - NM_032043 BRIP1 0 . . . 3.26 76.84 25 6.05 Yes 40 0.14 No 0 0 No -22 0.57 No 45 40.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131916812 + NM_005732 RAD50 0 . . . 2.3 83.14 23 4.6 No 67 -2.11 No 0 0 No -22 0.75 Yes 37 67.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68873555 + NM_133509 RAD51B 0 . . . 10.91 86.24 26 5.41 No 8 0.9 Yes 0 0 No -25 0.75 Yes 42 80.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69030146 + NM_133509 RAD51B 0 . . . 1.12 79.32 19 4.8 No 54 0.42 No 0 0 No -21 0.69 Yes 62 39.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41019478 + NM_001164269 RAD51 0 . . . 6.44 76.78 20 3.24 No 73 0.41 No 0 0 No -39 0.75 Yes 47 84.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68593132 + NM_133509 RAD51B 0 . . . 2.51 73.89 17 5.17 No 22 0.44 No 0 0 No -21 0.69 Yes 28 54.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68600442 + NM_133509 RAD51B 0 . . . 3.24 73.28 25 4.71 No 11 1.7 Yes 0 0 No -24 0.86 Yes 47 84.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59918638 - NM_032043 BRIP1 0 . . . 10.05 89.05 21 4.8 No 61 0.41 No 0 0 No -20 0.9 Yes 40 73.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47668126 + NM_000251 MSH2 0 . . . 2.97 80.12 38 7.34 Yes 57 -1.67 No 0 0 No -37 0.31 No 49 74.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105204869 + NM_021930 RINT1 0 . . . 3.06 67.7 19 4.8 No 50 -4.09 No 0 0 No -18 0.79 Yes 43 75.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47644012 + NM_000251 MSH2 0 . . . 2.21 67.36 26 5.39 No 36 0.93 Yes 0 0 No -25 0.9 Yes 51 54.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190728190 + NM_000534 PMS1 0 . . . 3.94 80.6 16 4.32 No 33 1.77 Yes 0 0 No -29 0.36 No 12 43.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108100451 + NM_000051 ATM 0 . . . 4.1 84 23 5.4 No 2 0.68 No 0 0 No -30 0.89 Yes 41 78.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68514897 + NM_133509 RAD51B 0 . . . 0.15 0 17 4.8 No 38 -4.42 No 0 0 No -43 0.82 Yes 55 38.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131940212 + NM_005732 RAD50 0 . . . 0.07 77.82 33 6 Yes 13 1.5 Yes 0 0 No -32 0.71 Yes 45 72.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68476436 + NM_133509 RAD51B 0 . . . 3.87 67.67 21 5.68 Yes 40 0.62 No 0 0 No -21 0.44 No 49 70.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68815505 + NM_004360 CDH1 0 . . . 3.67 70.85 31 6.91 Yes 23 0.69 No 0 0 No -27 0.56 No 40 85.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68895317 + NM_133509 RAD51B 0 . . . 10.11 78.92 30 4.75 No 26 1.03 Yes 0 0 No -29 0.39 No 32 92.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1216899 + NM_000455 STK11 0 . . . 5.11 71.64 38 5.62 Yes -1 0.21 No 0 0 No -24 0.62 No 53 72.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68496375 + NM_133509 RAD51B 0 . . . 1.32 67.73 17 4.83 No 72 1.31 Yes 0 0 No -27 0.87 Yes 53 47.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32935664 + NM_000059 BRCA2 0 . . . 5.54 79.28 15 5.39 No 17 -0.89 No 0 0 No -22 0.43 No 51 83.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75500654 - NM_001040108 MLH3 0 . . . 0.54 0 49 6.68 Yes 19 0.99 Yes 0 0 No -33 0.78 Yes 39 51.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69089953 + NM_133509 RAD51B 0 . . . 2.32 74.31 52 6.31 Yes 28 1.86 Yes 0 0 No -26 0.97 Yes 30 84.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69026434 + NM_133509 RAD51B 0 . . . 2.92 77.14 22 4.9 No 12 1.3 Yes 0 0 No -21 0.53 No 42 59.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215612739 - NM_000465 BARD1 0 . . . 4.7 79.84 51 7.41 Yes 3 1.01 Yes 0 0 No -39 0.52 No 48 68.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68656828 + NM_133509 RAD51B 0 . . . 0.78 71.3 44 6 Yes -1 0.8 Yes 0 0 No -26 0.87 Yes 49 44.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32947247 + NM_000059 BRCA2 0 . . . 0.16 83.85 34 6.08 Yes 32 1.22 Yes 0 0 No -33 0.68 Yes 50 46.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37075928 + NM_000249 MLH1 0 . . . 3.7 81.75 17 5.23 No 40 1.39 Yes 0 0 No -26 0.83 Yes 49 41.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47803311 + NM_000251 MSH2 0 . . . 1.87 63.98 26 4.52 No 1 0.08 No 0 0 No -26 0.48 No 50 78.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41009041 + NM_001164269 RAD51 0 . . . 5.2 85.02 67 7.05 Yes 5 1.23 Yes 0 0 No -29 0.8 Yes 53 81.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47662216 + NM_000251 MSH2 0 . . . 2.31 70.13 27 4.93 No 65 0.9 Yes 0 0 No -26 0.81 Yes 42 68.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68496473 + NM_133509 RAD51B 0 . . . 2.37 81.82 18 4.69 No 72 0.16 No 0 0 No -24 0.5 No 45 78.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56812050 + NM_058216 RAD51C 0 . . . 6.5 86.2 33 4.15 No 9 1.31 Yes 0 0 No -25 0.72 Yes 49 92.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68767750 + NM_133509 RAD51B 0 . . . 1.39 64.79 22 4.79 No 6 0.71 No 0 0 No -21 0.89 Yes 44 42.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47775360 + NM_000251 MSH2 0 . . . 5.48 82.73 13 5.51 No 34 0.94 Yes 0 0 No -23 0.62 No 24 46.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41196442 - NM_007294 BRCA1 0 . . . 0.43 0 26 4.86 No 14 0.38 No 0 0 No -25 0.64 No 49 44.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68784102 + NM_004360 CDH1 0 . . . 6.8 76.58 20 5.08 No 52 0.95 Yes 0 0 No -19 0.88 Yes 39 51.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190682037 + NM_000534 PMS1 0 . . . 2.62 78.6 35 6.16 Yes 52 0.76 No 0 0 No -17 0.55 No 42 19.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75478850 - NM_001040108 MLH3 0 . . . 8.94 85.08 19 5 No 17 0.66 No 0 0 No -18 0.67 Yes 41 73.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48027882 + NM_000179 MSH6 0 . . . 0.01 64.93 32 6.5 Yes 53 0.74 No 0 0 No -31 0.64 No 59 67.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68777180 + NM_133509 RAD51B 0 . . . 0.15 53.39 30 5.57 Yes 72 0.9 Yes 0 0 No -29 0.95 Yes 54 24.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59772427 - NM_032043 BRIP1 0 . . . 1.66 0 11 4.8 No 27 0.21 No 0 0 No -21 0.6 No 56 41.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68888604 + NM_133509 RAD51B 0 . . . 5.47 76.75 48 6.88 Yes 19 -1.12 No 0 0 No -27 0.59 No 43 33.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108155268 + NM_000051 ATM 0 . . . 0.55 0 23 5.68 Yes 28 -2.58 No 0 0 No -22 0.75 Yes 54 40.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190725206 + NM_000534 PMS1 0 . . . 0.44 0 49 8.71 Yes 75 0.59 No 0 0 No -48 0.73 Yes 29 40.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84389059 - NM_139076 FAM175A 0 . . . 4.65 77.43 41 5.78 Yes 2 1.03 Yes 0 0 No -26 0.63 No 45 52.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90960665 - NM_002485 NBN 0 . . . 2.5 71.04 23 7.06 Yes 36 0.59 No 0 0 No -22 0.54 No 46 53.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68758898 + NM_133509 RAD51B 0 . . . 6.79 76.52 21 5.1 No 28 1.22 Yes 0 0 No -20 0.77 Yes 37 82.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68578425 + NM_133509 RAD51B 0 . . . 1.24 56.82 9 4.69 No 40 0.93 Yes 0 0 No -23 0.61 No 18 69.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68769760 + NM_004360 CDH1 0 . . . 0.61 72.18 17 6.93 Yes 30 1.19 Yes 0 0 No -28 0.8 Yes 28 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29114124 - NM_001005735 CHEK2 0 . . . 3.12 75.7 17 4.34 No 34 0.98 Yes 0 0 No -41 0.5 No 41 63.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68305440 + NM_133509 RAD51B 0 . . . 3.95 83.52 15 4.58 No 38 1.64 Yes 0 0 No -57 0.35 No 25 77.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41239200 - NM_007294 BRCA1 0 . . . 5.48 75.34 35 7.19 Yes 1 1.3 Yes 0 0 No -34 0.92 Yes 37 68.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32945890 + NM_000059 BRCA2 0 . . . 4.86 71.77 18 5.44 No 52 -4.4 No 0 0 No -27 0.52 No 45 89.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59909123 - NM_032043 BRIP1 0 . . . 0.82 71.4 15 5.48 No 73 1.3 Yes 0 0 No -31 0.38 No 45 42.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108108268 + NM_000051 ATM 0 . . . 4.19 73.68 14 5.28 No 75 2.21 Yes 0 0 No -22 0.41 No 29 88.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59911533 - NM_032043 BRIP1 0 . . . 1.73 66.02 23 5.39 No 39 -1.75 No 0 0 No -22 0.88 Yes 34 63.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94169005 - NM_005591 MRE11 0 . . . 0.38 0 17 5.83 Yes 42 -1.4 No 0 0 No -16 0.77 Yes 37 63.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131908768 + NM_005732 RAD50 0 . . . 0.31 67.64 18 4.76 No 66 -5.66 No 0 0 No -22 0.88 Yes 47 49.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47800199 + NM_000251 MSH2 0 . . . 2.97 81.07 14 5.27 No 41 0.43 No 0 0 No -28 0.67 Yes 49 52.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94197784 - NM_005591 MRE11 0 . . . 3.36 72.88 25 5.48 No -1 0.83 Yes 0 0 No -24 0.62 No 59 45.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59874829 - NM_032043 BRIP1 0 . . . 1.86 78.33 28 4.66 No 75 1.66 Yes 0 0 No -27 0.46 No 49 51.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47750057 + NM_000251 MSH2 0 . . . 2.6 0 21 5.79 Yes 35 -1.8 No 0 0 No -19 0.64 No 34 65.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108108838 + NM_000051 ATM 0 . . . 2.24 80.12 74 8.1 Yes 7 1.02 Yes 0 0 No -29 0.89 Yes 51 82.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48031646 + NM_000179 MSH6 0 . . . 5.6 85.04 14 4.07 No 14 0.1 No 0 0 No -18 0.72 Yes 44 87.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94202575 - NM_005591 MRE11 0 . . . 4.4 64.57 28 6.16 Yes 70 0.93 Yes 0 0 No -24 0.67 Yes 42 68.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41207121 - NM_007294 BRCA1 0 . . . 2.74 81.3 24 6.4 Yes 29 1.03 Yes 0 0 No -27 0.64 No 45 80.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7580154 - NM_000546 TP53 0 . . . 0.79 68.47 25 6.3 Yes 9 1.48 Yes 0 0 No -24 0.74 Yes 49 73.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41244766 - NM_007294 BRCA1 0 . . . 3.51 84.76 16 6.54 Yes 73 -5.4 No 0 0 No -23 0.76 Yes 51 42.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215648652 - NM_000465 BARD1 0 . . . 2.93 66.38 22 3.72 No 29 0.22 No 0 0 No -22 0.31 No 41 75.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68561726 + NM_133509 RAD51B 0 . . . 1.29 66.06 16 5.29 No 14 -2.9 No 0 0 No -23 0.73 Yes 45 63.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45798246 - NM_001048171 MUTYH 0 . . . 6.9 83.42 32 6.86 Yes NA NA NA 0 0 No -32 0.74 Yes 34 45.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68800133 + NM_004360 CDH1 0 . . . 2.59 77.69 32 5.49 No 58 -3.67 No 0 0 No -31 0.69 Yes 48 82.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69017605 + NM_133509 RAD51B 0 . . . 0.7 56.46 56 7.97 Yes 53 -3.71 No 0 0 No -30 0.64 No 43 24.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75500341 - NM_001040108 MLH3 0 . . . 9.77 83.91 16 5.2 No 2 0.53 No 0 0 No -26 0.41 No 41 81.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108149841 + NM_000051 ATM 0 . . . 7.71 85.58 16 6.24 Yes 4 1.39 Yes 0 0 No -20 0.32 No 42 75.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68868625 + NM_133509 RAD51B 0 . . . 4.64 76.88 19 4.45 No 52 0.2 No 0 0 No -19 0.83 Yes 42 49.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215589840 - NM_000465 BARD1 0 . . . 3.57 77.72 25 5.39 No 59 0.81 Yes 0 0 No -22 0.76 Yes 50 67.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68436399 + NM_133509 RAD51B 0 . . . 7.74 71.64 11 3.1 No 45 0.52 No 0 0 No -44 0.6 No 46 82.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68655671 + NM_133509 RAD51B 0 . . . 5.08 77.15 20 5 No 71 1.14 Yes 0 0 No -20 0.41 No 35 70.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68663138 + NM_133509 RAD51B 0 . . . 0.72 63.49 23 4.88 No 56 0.01 No 0 0 No -22 0.77 Yes 40 45.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997049 + NM_001164269 RAD51 0 . . . 3.6 85.02 39 8.18 Yes 4 1.2 Yes 0 0 No -38 0.76 Yes 54 56.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68673833 + NM_133509 RAD51B 0 . . . 3.73 59.39 26 6.2 Yes 76 0.68 No 0 0 No -25 0.74 Yes 43 50.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89683537 + NM_000314 PTEN 0 . . . 3.51 57.82 18 4.8 No 11 0.26 No 0 0 No -47 0.83 Yes 43 35.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68788267 + NM_133509 RAD51B 0 . . . 5.89 82 17 5.28 No 24 1.35 Yes 0 0 No -21 0.48 No 50 78.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29099518 - NM_001005735 CHEK2 0 . . . 5.52 92.83 15 5.16 No 58 1.73 Yes 0 0 No -26 0.73 Yes 42 70.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68407571 + NM_133509 RAD51B 0 . . . 0.37 67.64 13 4.35 No 24 0.35 No 0 0 No -22 0.74 Yes 21 59.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68768680 + NM_133509 RAD51B 0 . . . 2.2 75.32 22 5.29 No 21 0.47 No 0 0 No -51 0.61 No 47 92.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68809616 + NM_004360 CDH1 0 . . . 3.89 76.12 18 5.9 Yes 48 0.11 No 0 0 No -28 0.62 No 45 41.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48031514 + NM_000179 MSH6 0 . . . 7.28 80.82 16 4.74 No 10 0.47 No 0 0 No -26 0.57 No 47 80.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131918108 + NM_005732 RAD50 0 . . . 5.5 81.47 24 7.21 Yes 30 0.59 No 0 0 No -38 0.58 No 47 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215664400 - NM_000465 BARD1 0 . . . 6.95 77.3 38 5.57 Yes 4 0.34 No 0 0 No -40 0.42 No 54 36.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68673551 + NM_133509 RAD51B 0 . . . 4.3 84 47 9.35 Yes 2 1.48 Yes 0 0 No -32 0.59 No 19 76.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68865933 + NM_004360 CDH1 0 . . . 2.43 70.32 40 7.23 Yes 44 -2.16 No 0 0 No -39 0.62 No 55 52.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89692835 + NM_000314 PTEN 0 . . . 1.98 74.89 17 4.69 No 74 0.68 No 0 0 No -20 0.73 Yes 51 64.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68847973 + NM_133509 RAD51B 0 . . . 1.37 0 21 5.9 Yes 22 1.34 Yes 0 0 No -20 0.5 No 36 66.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152356595 - NM_005431 XRCC2 0 . . . 3.66 76.79 26 6.67 Yes 38 0.63 No 0 0 No -20 0.57 No 45 95.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48015895 + NM_000179 MSH6 0 . . . 3.92 86.29 22 4.56 No 9 1.09 Yes 0 0 No -30 0.48 No 49 89.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94226900 - NM_005591 MRE11 0 . . . 3.78 76.24 20 4.38 No 16 0.69 No 0 0 No -44 0.29 No 42 74.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131914427 + NM_005732 RAD50 0 . . . 2.92 71.75 20 4.37 No 31 1.23 Yes 0 0 No -24 0.79 Yes 27 75.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105185610 + NM_021930 RINT1 0 . . . 2.56 74.52 33 5.82 Yes 47 0.48 No 0 0 No -32 0.49 No 37 71.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21971699 - NM_000077 CDKN2A 0 . . . 1.37 80.48 36 5.54 No 68 -5.64 No 0 0 No -29 0.36 No 53 54.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190677731 + NM_000534 PMS1 0 . . . 1.88 66.98 12 3.98 No 19 0.18 No 0 0 No -17 0.59 No 39 75.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47655370 + NM_000251 MSH2 0 . . . 4.39 68.18 22 5.92 Yes 56 1.11 Yes 0 0 No -21 0.78 Yes 42 61.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47726246 + NM_000251 MSH2 0 . . . 7.97 87.4 35 3.78 No 69 0.78 Yes 0 0 No -35 0.34 No 46 94.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68911669 + NM_133509 RAD51B 0 . . . 0.71 68.45 23 4.2 No 71 -2.06 No 0 0 No -22 0.72 Yes 49 68.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94218167 - NM_005591 MRE11 0 . . . 3.49 80.9 26 5.05 No 37 -4.49 No 0 0 No -19 0.86 Yes 62 36.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68480799 + NM_133509 RAD51B 0 . . . 2.14 63.45 14 5.2 No 23 1.02 Yes 0 0 No -28 0.61 No 35 80.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68600102 + NM_133509 RAD51B 0 . . . 2.11 67.4 30 7.35 Yes 51 0.41 No 0 0 No -29 0.87 Yes 31 45.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29120295 - NM_001005735 CHEK2 0 . . . 3.63 83.52 12 5.29 No 34 1.52 Yes 0 0 No -27 0.43 No 49 62.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29139243 - NM_001005735 CHEK2 0 . . . 3.26 80.07 28 3.56 No 50 1.26 Yes 0 0 No -28 0.64 No 49 79.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29130353 - NM_001005735 CHEK2 0 . . . 3.86 82.81 39 6.48 Yes 23 0.55 No 0 0 No -30 0.58 No 49 88.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68426773 + NM_133509 RAD51B 0 . . . 1.86 76.63 23 5.39 No 75 -4.96 No 0 0 No -42 0.54 No 48 76.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68442797 + NM_133509 RAD51B 0 . . . 6.82 76.64 29 5.32 No 69 1.06 Yes 0 0 No -28 0.62 No 35 52.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6029905 - NM_000535 PMS2 0 . . . 1.62 76.51 24 5.31 No 4 0.4 No 0 0 No -23 0.55 No 54 83.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69039524 + NM_133509 RAD51B 0 . . . 3.72 69.05 20 4.79 No 31 2.39 Yes 0 0 No -44 0.76 Yes 27 82.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68362362 + NM_133509 RAD51B 0 . . . 4.63 77.95 33 7.29 Yes 67 -2.42 No 0 0 No -25 0.76 Yes 38 47.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108155567 + NM_000051 ATM 0 . . . 2.68 66.68 36 6.16 Yes 11 1.18 Yes 0 0 No -35 0.62 No 47 86.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75481695 - NM_001040108 MLH3 0 . . . 0.81 66.85 21 5.83 Yes 59 1.09 Yes 0 0 No -20 0.81 Yes 47 56.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69149739 + NM_133509 RAD51B 0 . . . 1.01 72.88 29 5.48 No 14 0.16 No 0 0 No -28 0.95 Yes 44 85.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68889031 + NM_133509 RAD51B 0 . . . 0.09 74.68 19 3.9 No 4 0.27 No 0 0 No -18 0.6 No 54 83.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190671879 + NM_000534 PMS1 0 . . . 4.9 69.94 11 5.21 No 17 1.71 Yes 0 0 No -23 0.78 Yes 45 80.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68385542 + NM_133509 RAD51B 0 . . . 1.87 63.37 26 5.48 No 3 0.14 No 0 0 No -25 0.95 Yes 42 37.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68435367 + NM_133509 RAD51B 0 . . . 2.89 74.69 23 4.02 No 1 1.26 Yes 0 0 No -23 0.63 No 46 70.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89659696 + NM_000314 PTEN 0 . . . 5.23 87.9 25 5.47 No 65 -0.87 No 0 0 No -21 0.47 No 53 48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68848578 + NM_004360 CDH1 0 . . . 5.19 81.69 36 6.7 Yes 13 1.24 Yes 0 0 No -35 0.47 No 45 93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68563503 + NM_133509 RAD51B 0 . . . 1.76 72.18 25 5.04 No 57 0.35 No 0 0 No -24 0.67 Yes 53 66.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41217580 - NM_007294 BRCA1 0 . . . 1.08 84.22 42 6.52 Yes 8 -0.02 No 0 0 No -24 0.68 Yes 51 46.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108116876 + NM_000051 ATM 0 . . . 2.1 65.43 34 7.65 Yes 62 -2.29 No 0 0 No -33 0.58 No 48 45.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108111315 + NM_000051 ATM 0 . . . 4.27 70.38 29 5.56 Yes 41 0.31 No 0 0 No -28 0.62 No 43 52.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68648349 + NM_133509 RAD51B 0 . . . 2.73 89.19 32 6 Yes 59 1.02 Yes 0 0 No -31 0.87 Yes 49 66.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69098672 + NM_133509 RAD51B 0 . . . 4.98 87.27 40 6.48 Yes 12 0.83 Yes 0 0 No -28 0.66 No 46 91.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47779508 + NM_000251 MSH2 0 . . . 1.91 85.66 71 6.47 Yes 22 0.17 No 0 0 No -37 0.8 Yes 49 77.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37058639 + NM_000249 MLH1 0 . . . 3.88 75.58 22 5.83 Yes 35 -1.75 No 0 0 No -21 0.82 Yes 45 46.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94168758 - NM_005591 MRE11 0 . . . 7.64 75.23 18 4.9 No 13 1.04 Yes 0 0 No -23 0.54 No 44 55.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68544719 + NM_133509 RAD51B 0 . . . 3.02 69.08 41 6.58 Yes 55 0.56 No 0 0 No -28 0.36 No 36 31.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90966304 - NM_002485 NBN 0 . . . 4.59 76.5 29 6.61 Yes 26 1.83 Yes 0 0 No -24 0.45 No 36 91.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94218393 - NM_005591 MRE11 0 . . . 3.75 84.95 21 5 No 12 0.57 No 0 0 No -20 0.69 Yes 19 75.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68305889 + NM_133509 RAD51B 0 . . . 5.54 70.33 27 5.38 No 22 0.82 Yes 0 0 No -26 0.45 No 50 56.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190721352 + NM_000534 PMS1 0 . . . 2.77 79.49 23 6.08 Yes 60 0.8 Yes 0 0 No -22 0.66 No 46 59.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21994574 - NM_000077 CDKN2A 0 . . . 8.65 79.96 31 6.15 Yes 47 0.52 No 0 0 No -30 0.74 Yes 50 54.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48028478 + NM_000179 MSH6 0 . . . 1.64 77.18 42 6.63 Yes 65 0.13 No 0 0 No -41 0.87 Yes 46 73.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68628684 + NM_133509 RAD51B 0 . . . 0.82 71.19 36 8.86 Yes 53 0.26 No 0 0 No -35 0.8 Yes 50 84.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68832721 + NM_004360 CDH1 0 . . . 1.64 74.82 16 4.92 No 56 0.8 Yes 0 0 No -22 0.34 No 49 57.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89684284 + NM_000314 PTEN 0 . . . 3.38 75.36 15 4.58 No 2 1.11 Yes 0 0 No -14 0.3 No 30 65.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29091895 - NM_001005735 CHEK2 0 . . . 2.44 69.9 40 6.44 Yes 9 1.14 Yes 30 0.77 Yes -21 0.71 Yes 43 61.53 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 68308432 + NM_133509 RAD51B 0 . . . 3.37 72.17 33 5.66 Yes 56 0.55 No 0 0 No -28 0.7 Yes 40 66.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47690347 + NM_000251 MSH2 0 . . . 3.43 71.04 27 5.48 No 13 0.84 Yes 0 0 No -26 0.93 Yes 45 74.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68486238 + NM_133509 RAD51B 0 . . . 3.98 69.97 21 5.2 No 75 -5.92 No 0 0 No -26 0.78 Yes 45 76.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94168881 - NM_005591 MRE11 0 . . . 2.87 76.72 13 5.2 No 8 0.63 No 0 0 No -24 0.34 No 50 89.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68704265 + NM_133509 RAD51B 0 . . . 2.37 76.81 16 4.32 No 32 1.09 Yes 0 0 No -16 0.78 Yes 41 35.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190656496 + NM_000534 PMS1 0 . . . 1.29 64.19 25 5.95 Yes 58 0.73 No 24 0.94 Yes -34 0.65 No 56 52.02 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 190725364 + NM_000534 PMS1 0 . . . 0.64 65.77 21 5.32 No 13 0.68 No 0 0 No -25 0.37 No 45 93.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59796850 - NM_032043 BRIP1 0 . . . 1.77 77.34 28 4.75 No 11 1.63 Yes 0 0 No -27 0.55 No 47 60.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69007043 + NM_133509 RAD51B 0 . . . 2.31 76.64 29 5.38 No 66 0.91 Yes 0 0 No -22 0.53 No 46 64.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68864769 + NM_004360 CDH1 0 . . . 2.51 74.68 14 4.47 No 55 -3.14 No 0 0 No -32 0.45 No 44 59.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90956591 - NM_002485 NBN 0 . . . 1.26 61.58 23 5.37 No 74 -6.14 No 0 0 No -23 0.58 No 44 54.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68701246 + NM_133509 RAD51B 0 . . . 1.68 67.67 34 5.97 Yes 69 -5.48 No 0 0 No -33 0.82 Yes 48 74.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59859449 - NM_032043 BRIP1 0 . . . 6.5 79.16 32 6.37 Yes 73 1.68 Yes 0 0 No -31 0.55 No 41 60.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23643291 - NM_024675 PALB2 0 . . . 1.32 77.73 17 5.25 No 1 0.7 No 0 0 No -22 0.51 No 44 32.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104170617 - NM_001100119 XRCC3 0 . . . 1.53 75.06 27 6.24 Yes 35 1.02 Yes 0 0 No -26 0.58 No 51 32.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47688073 + NM_000251 MSH2 0 . . . 1.68 66.72 15 4.12 No 9 0.54 No 0 0 No -28 0.5 No 26 74.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131946648 + NM_005732 RAD50 0 . . . 0.37 68.14 12 4.12 No 32 1.74 Yes 0 0 No -32 0.5 No 51 80.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190699198 + NM_000534 PMS1 0 . . . 4.97 83.37 21 6.54 Yes 14 0.61 No 0 0 No -30 0.64 No 44 89.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68832203 + NM_004360 CDH1 0 . . . 7.02 86.81 18 3.57 No -3 1.53 Yes 0 0 No -22 0.7 Yes 46 61.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41209001 - NM_007294 BRCA1 0 . . . 8.82 85.57 30 6.32 Yes 22 1.83 Yes 0 0 No -26 0.58 No 36 92.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68816158 + NM_004360 CDH1 0 . . . 5.35 90.16 16 4.24 No -3 0.37 No 0 0 No -30 0.49 No 47 67.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59863010 - NM_032043 BRIP1 0 . . . 0.44 72.24 17 5.83 Yes 2 0.75 No 0 0 No -30 0.68 Yes 44 72.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23640086 - NM_024675 PALB2 0 . . . 1.89 74.47 25 5.73 Yes 53 0.26 No 0 0 No -24 0.82 Yes 36 56.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94219031 - NM_005591 MRE11 0 . . . 0.06 70.23 19 6.22 Yes 18 0.32 No 0 0 No -32 0.48 No 40 58.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68370825 + NM_133509 RAD51B 0 . . . 3.06 63.42 22 5.09 No 54 0.52 No 0 0 No -22 0.76 Yes 47 66.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68826767 + NM_133509 RAD51B 0 . . . 3.57 79.42 28 5.21 No 57 -4.4 No 0 0 No -27 0.74 Yes 42 71.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59801327 - NM_032043 BRIP1 0 . . . 1.95 71.56 54 5.77 Yes 58 0.06 No 0 0 No -30 0.44 No 47 66.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68870852 + NM_004360 CDH1 0 . . . 1.22 0 22 5 No 63 0.14 No 0 0 No -21 0.66 No 50 77.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104163057 - NM_001100119 XRCC3 0 . . . 7.7 88.05 27 5.04 No 46 2.41 Yes 0 0 No -26 0.87 Yes 45 65.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215612424 - NM_000465 BARD1 0 . . . 5.13 70.44 11 4.12 No 24 1.96 Yes 0 0 No -18 0.78 Yes 34 85.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108236978 + NM_000051 ATM 0 . . . 6.32 71.21 19 4.16 No 60 1.24 Yes 0 0 No -41 0.31 No 31 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68770638 + NM_133509 RAD51B 0 . . . 0.83 74.02 22 6.85 Yes 66 -3.74 No 0 0 No -21 0.96 Yes 54 80.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41020239 + NM_001164269 RAD51 0 . . . 3.6 85.02 13 4.79 No 4 1.2 Yes 0 0 No -48 0.56 No 54 61.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6027873 - NM_000535 PMS2 0 . . . 2.18 73.5 26 5.38 No 69 -5.31 No 0 0 No -25 0.88 Yes 52 54.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68605345 + NM_133509 RAD51B 0 . . . 0.94 68.77 38 6.12 Yes 28 0.9 Yes 0 0 No -26 0.77 Yes 46 61.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108235248 + NM_000051 ATM 0 . . . 0.43 77.78 37 6.56 Yes 48 1.27 Yes 0 0 No -26 0.87 Yes 50 34.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69102224 + NM_133509 RAD51B 0 . . . 3.47 58.06 36 6.05 Yes 74 -2.85 No 0 0 No -35 0.74 Yes 42 68.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69062003 + NM_133509 RAD51B 0 . . . 1.24 80.97 14 5.47 No 49 -3.01 No 0 0 No -24 0.69 Yes 20 49.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68998840 + NM_133509 RAD51B 0 . . . 2.71 80.79 28 5.39 No -4 0.47 No 0 0 No -27 0.34 No 51 41.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108098934 + NM_000051 ATM 0 . . . 1.87 61.62 28 5.29 No 71 0.25 No 0 0 No -27 0.77 Yes 45 52.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68676721 + NM_133509 RAD51B 0 . . . 3.88 84 13 3.02 No 2 0.98 Yes 0 0 No -16 0.91 Yes 18 65.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89700564 + NM_000314 PTEN 0 . . . 1.11 0 19 4.9 No 34 -2.22 No 0 0 No -42 0.87 Yes 33 50.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105207047 + NM_021930 RINT1 0 . . . 1.47 76.83 26 4.82 No 23 -2.72 No 0 0 No -25 0.36 No 50 80.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68705342 + NM_133509 RAD51B 0 . . . 3.26 78.97 19 5.83 Yes 75 0.83 Yes 0 0 No -18 0.33 No 46 65.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56791840 + NM_058216 RAD51C 0 . . . 0.41 81.59 32 6.39 Yes 64 0.48 No 0 0 No -31 0.43 No 39 68.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131937121 + NM_005732 RAD50 0 . . . 5.42 78.72 46 4.13 No 54 0.35 No 0 0 No -26 0.48 No 42 52.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89638909 + NM_000314 PTEN 0 . . . 7.12 80.32 22 5 No 61 -2.12 No 0 0 No -23 0.57 No 40 75.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68323801 + NM_133509 RAD51B 0 . . . 5.41 66.19 16 6.09 Yes 22 0.06 No 0 0 No -25 0.47 No 41 44.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89648313 + NM_000314 PTEN 0 . . . 3.78 76.14 21 5.17 No 58 1.61 Yes 0 0 No -24 0.65 No 15 53.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7581329 - NM_000546 TP53 0 . . . 0.98 76.63 18 4.86 No 58 -3.88 No 0 0 No -17 0.45 No 50 58.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68772149 + NM_004360 CDH1 0 . . . 3.46 80.35 25 6.19 Yes NA NA NA 0 0 No -24 0.63 No 45 21.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108183373 + NM_000051 ATM 0 . . . 1.34 69.96 33 6 Yes 37 0.67 No 0 0 No -32 0.44 No 39 68.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68318756 + NM_133509 RAD51B 0 . . . 2.7 89.57 28 5.38 No -4 0.28 No 0 0 No -27 0.75 Yes 52 60.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68285170 + NM_133509 RAD51B 0 . . . 0.25 63.2 33 4.99 No 65 -4.58 No 0 0 No -26 0.78 Yes 46 73.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41021542 + NM_001164269 RAD51 0 . . . 2.23 76.63 69 8.42 Yes 15 0.24 No 0 0 No -44 0.33 No 43 57.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90948981 - NM_002485 NBN 0 . . . 4.98 69.74 19 4.19 No 68 -5.97 No 0 0 No -21 0.44 No 47 58.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90970557 - NM_002485 NBN 0 . . . 1.45 66.08 19 3.49 No 49 -3.24 No 0 0 No -18 0.5 No 49 92.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68651054 + NM_133509 RAD51B 0 . . . 0.59 67.8 18 4.9 No 59 1.28 Yes 0 0 No -23 0.64 No 42 86.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41012883 + NM_001164269 RAD51 0 . . . 4.05 74.84 28 6.28 Yes 58 -2.83 No 0 0 No -27 0.84 Yes 38 42.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47638224 + NM_000251 MSH2 0 . . . 6.52 82.23 25 5.23 No 70 0.8 Yes 0 0 No -24 0.5 No 45 54.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89669379 + NM_000314 PTEN 0 . . . 5.08 81.71 14 4.9 No 56 -1.86 No 0 0 No -17 0.36 No 44 79.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215626289 - NM_000465 BARD1 0 . . . 1.17 80.65 31 4.91 No 45 1.43 Yes 0 0 No -19 0.79 Yes 50 84.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190658473 + NM_000534 PMS1 0 . . . 4.06 66.15 35 5.72 Yes 21 0.29 No 0 0 No -34 0.58 No 37 48.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68819683 + NM_133509 RAD51B 0 . . . 7.59 73.03 20 7.21 Yes 76 -4.15 No 0 0 No -19 0.64 No 50 67.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108180114 + NM_000051 ATM 0 . . . 4.11 80.07 47 7.28 Yes 36 0.26 No 0 0 No -46 0.4 No 49 71.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68980191 + NM_133509 RAD51B 0 . . . 0.64 0 45 7.13 Yes 69 -6.41 No 0 0 No -24 0.4 No 55 23.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190687655 + NM_000534 PMS1 0 . . . 2.07 79.89 18 4.25 No 41 1.02 Yes 0 0 No -28 0.4 No 43 47.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41256560 - NM_007294 BRCA1 0 . . . 4.75 72.03 28 5.17 No 54 0.48 No 0 0 No -27 0.91 Yes 40 62.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131941622 + NM_005732 RAD50 0 . . . 1.82 78.44 37 5.9 Yes 62 0.64 No 0 0 No -27 0.32 No 49 25.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29119418 - NM_001005735 CHEK2 0 . . . 3.25 80.12 34 5.69 Yes 75 1.19 Yes 0 0 No -33 0.65 No 50 67.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37033509 + NM_000249 MLH1 0 . . . 7.74 84.23 21 4.79 No 19 0.79 Yes 0 0 No -20 0.9 Yes 39 35.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32901278 + NM_000059 BRCA2 0 . . . 8.44 87.27 23 5.66 Yes 8 1.21 Yes 0 0 No -22 0.54 No 50 95.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108100689 + NM_000051 ATM 0 . . . 3.39 83.74 54 8.85 Yes 14 1.17 Yes 0 0 No -37 0.67 Yes 44 91.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94192873 - NM_005591 MRE11 0 . . . 2.01 74.26 12 5.39 No 55 1.2 Yes 0 0 No -26 0.81 Yes 38 90.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108201896 + NM_000051 ATM 0 . . . 10.27 82.42 57 6.39 Yes 63 0.65 No 0 0 No -36 0.44 No 48 78.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108238203 + NM_000051 ATM 0 . . . 1.65 67.63 23 7.36 Yes 55 -2.13 No 0 0 No -22 0.57 No 29 65.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94180118 - NM_005591 MRE11 0 . . . 5.61 75.89 22 4.99 No 6 0.77 Yes 0 0 No -21 0.52 No 41 96.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48015578 + NM_000179 MSH6 0 . . . 2.68 86.29 19 4.62 No 7 1.08 Yes 0 0 No -30 0.32 No 51 82.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89672654 + NM_000314 PTEN 0 . . . 2.04 71.61 31 5.91 Yes 0 -1.42 No 0 0 No -26 0.46 No 59 43.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29095039 - NM_001005735 CHEK2 0 . . . 2.2 76.04 27 6.26 Yes 75 -5.46 No 0 0 No -26 0.93 Yes 49 55.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215644084 - NM_000465 BARD1 0 . . . 4.3 66.85 65 7.51 Yes 72 -6.08 No 0 0 No -27 0.9 Yes 40 52.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56777099 + NM_058216 RAD51C 0 . . . 1.2 62.79 28 5.65 Yes 2 0.1 No 0 0 No -23 0.45 No 46 70.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190655826 + NM_000534 PMS1 0 . . . 3.49 74.9 32 5.97 Yes 28 1.11 Yes 0 0 No -25 0.55 No 30 83.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152348291 - NM_005431 XRCC2 0 . . . 0.13 74.23 42 6.21 Yes 70 -2.53 No 0 0 No -23 0.9 Yes 54 50.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68556808 + NM_133509 RAD51B 0 . . . 6.63 72.78 19 5.61 Yes 45 0.07 No 0 0 No -18 0.45 No 45 33.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68941886 + NM_133509 RAD51B 0 . . . 1.36 67.35 19 7.07 Yes 33 0.65 No 0 0 No -18 0.57 No 37 72.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68880368 + NM_133509 RAD51B 0 . . . 5.08 75.14 34 6.67 Yes 48 -3.59 No 0 0 No -33 0.84 Yes 43 78.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68358766 + NM_133509 RAD51B 0 . . . 8.09 81.05 69 8.45 Yes 11 0.59 No 0 0 No -31 0.44 No 47 81.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47699876 + NM_000251 MSH2 0 . . . 2.27 68.39 38 6.57 Yes 16 -2.45 No 0 0 No -37 0.51 No 43 68.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68532819 + NM_133509 RAD51B 0 . . . 3.32 68.84 15 5.5 No 29 -3.38 No 0 0 No -24 0.33 No 40 39.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84401836 - NM_139076 FAM175A 0 . . . 8.84 79.55 26 5.06 No 73 0.35 No 0 0 No -25 0.88 Yes 46 55.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47761509 + NM_000251 MSH2 0 . . . 0.65 67.68 25 4.89 No 40 1.4 Yes 0 0 No -24 0.82 Yes 49 65.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68538496 + NM_133509 RAD51B 0 . . . 2.57 74.64 16 5.86 Yes 51 0.9 Yes 0 0 No -30 0.62 No 52 14.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68562080 + NM_133509 RAD51B 0 . . . 0.03 0 10 5.48 No 20 0.96 Yes 0 0 No -34 0.37 No 38 74.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68297220 + NM_133509 RAD51B 0 . . . 6.73 82.58 18 4.7 No 16 1.14 Yes 0 0 No -26 0.32 No 42 95.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59847629 - NM_032043 BRIP1 0 . . . 2.29 60.06 18 5.01 No 31 1.02 Yes 0 0 No -22 0.89 Yes 27 32.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68710602 + NM_133509 RAD51B 0 . . . 3.32 76.49 32 6.49 Yes 63 2.07 Yes 0 0 No -31 0.59 No 44 82.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68284801 + NM_133509 RAD51B 0 . . . 6.31 75.22 25 4.4 No 11 0.75 No 0 0 No -24 0.93 Yes 47 75.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68481807 + NM_133509 RAD51B 0 . . . 3.22 75.54 26 5.92 Yes 62 1.22 Yes 0 0 No -25 0.66 No 51 85.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68664390 + NM_133509 RAD51B 0 . . . 8.67 85.24 26 5.78 Yes 11 0.96 Yes 0 0 No -25 0.69 Yes 47 88.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190739156 + NM_000534 PMS1 0 . . . 5.08 83.8 18 4.47 No 76 0.99 Yes 0 0 No -15 0.62 No 44 73.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68878678 + NM_133509 RAD51B 0 . . . 6.18 78.65 36 6.01 Yes 65 1.03 Yes 0 0 No -25 0.57 No 48 52.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48018842 + NM_000179 MSH6 0 . . . 0.96 0 15 5 No 66 0.55 No 0 0 No -50 0.43 No 26 67.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47686522 + NM_000251 MSH2 0 . . . 8.1 90.05 17 7 Yes 27 0.06 No 0 0 No -26 0.84 Yes 52 63.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108194844 + NM_000051 ATM 0 . . . 1.15 75.15 23 5.38 No 21 0.96 Yes 0 0 No -22 0.78 Yes 47 91.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215664628 - NM_000465 BARD1 0 . . . 2.62 82.47 9 4.9 No 64 -4.66 No 0 0 No -25 0.59 No 50 46.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47752260 + NM_000251 MSH2 0 . . . 3.4 73.85 20 5.73 Yes 55 0.52 No 0 0 No -25 0.81 Yes 43 60.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68621625 + NM_133509 RAD51B 0 . . . 3.39 68.95 14 4.12 No 45 0.52 No 0 0 No -25 0.85 Yes 54 34.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68995691 + NM_133509 RAD51B 0 . . . 4 71.66 16 5.09 No 58 0.74 No 0 0 No -20 0.68 Yes 40 36.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6032517 - NM_000535 PMS2 0 . . . 3.08 63.34 31 7.2 Yes 75 0.67 No 0 0 No -30 0.7 Yes 43 63.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68552323 + NM_133509 RAD51B 0 . . . 1.07 61.99 17 4.8 No -3 0.25 No 0 0 No -25 0.63 No 61 32.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666483 - NM_000465 BARD1 0 . . . 4.07 70.78 92 6.86 Yes 17 0.7 No 0 0 No -27 0.55 No 41 80.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21989554 - NM_000077 CDKN2A 0 . . . 5.5 73.74 16 4.69 No 12 0.94 Yes 0 0 No -15 0.38 No 46 84.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215614321 - NM_000465 BARD1 0 . . . 4.56 73.8 23 4.9 No 8 1.82 Yes 0 0 No -22 0.95 Yes 31 64.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41230455 - NM_007294 BRCA1 0 . . . 0.61 74.47 55 6.54 Yes 57 0.96 Yes 0 0 No -54 0.42 No 18 56.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68422105 + NM_133509 RAD51B 0 . . . 3.29 66.6 28 5.37 No 69 0.13 No 0 0 No -56 0.76 Yes 47 60.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32934707 + NM_000059 BRCA2 0 . . . 2.1 74.73 23 5.74 Yes 33 1.13 Yes 0 0 No -22 0.81 Yes 25 33.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32916724 + NM_000059 BRCA2 0 . . . 4.03 66.12 36 4.18 No 30 -2.95 No 0 0 No -35 0.69 Yes 58 76.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68826720 + NM_133509 RAD51B 0 . . . 0.39 67.98 19 5.48 No 53 -4.93 No 0 0 No -18 0.65 No 48 68.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68359256 + NM_133509 RAD51B 0 . . . 2.74 68.67 24 5.48 No 15 0.28 No 0 0 No -27 0.44 No 47 81.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108144914 + NM_000051 ATM 0 . . . 1.78 74.24 22 5.3 No 50 0.17 No 0 0 No -24 0.6 No 50 93.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68809877 + NM_004360 CDH1 0 . . . 4.74 73.35 10 5.26 No 5 0.11 No 0 0 No -9 0.39 No 43 66.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68301634 + NM_133509 RAD51B 0 . . . 3.8 68.53 47 6.3 Yes 35 0.01 No 0 0 No -21 0.31 No 28 72.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190671057 + NM_000534 PMS1 0 . . . 3.89 71.03 30 6.53 Yes 60 1.15 Yes 0 0 No -29 0.9 Yes 48 54.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215604008 - NM_000465 BARD1 0 . . . 6.03 85.8 15 3.18 No 63 1.02 Yes 0 0 No -25 0.73 Yes 46 84.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108127518 + NM_000051 ATM 0 . . . 9 76.62 27 5.2 No 43 0.53 No 0 0 No -26 0.56 No 42 73.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68823116 + NM_004360 CDH1 0 . . . 8.31 86.16 16 5.04 No 11 1.21 Yes 0 0 No -20 0.69 Yes 47 92.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56796270 + NM_058216 RAD51C 0 . . . 5.63 66.9 18 5.29 No 73 0.96 Yes 0 0 No -29 0.44 No 43 72.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37062756 + NM_000249 MLH1 0 . . . 4.24 81.69 19 4.74 No 4 0.46 No 0 0 No -24 0.82 Yes 47 77.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47675111 + NM_000251 MSH2 0 . . . 2.78 80.12 60 5.6 Yes 7 1.02 Yes 0 0 No -44 0.7 Yes 51 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68774688 + NM_133509 RAD51B 0 . . . 2.57 79.51 21 5.74 Yes 41 1.84 Yes 0 0 No -20 0.69 Yes 42 52.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59844650 - NM_032043 BRIP1 0 . . . 0.18 66.53 27 5.14 No 74 -3.81 No 0 0 No -24 0.86 Yes 49 36.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215592459 - NM_000465 BARD1 0 . . . 3.22 0 28 5.34 No 33 0.45 No 0 0 No -27 0.73 Yes 40 33.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6034306 - NM_000535 PMS2 0 . . . 4.42 84.22 18 4.79 No 8 1.13 Yes 0 0 No -17 0.28 No 50 94.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68763137 + NM_133509 RAD51B 0 . . . 2.24 69.23 23 6.16 Yes 5 1.24 Yes 0 0 No -25 0.36 No 43 94.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108112372 + NM_000051 ATM 0 . . . 2.33 66.41 23 4.27 No 71 0.51 No 0 0 No -25 0.65 No 48 72.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89719055 + NM_000314 PTEN 0 . . . 6.52 74.92 21 6.46 Yes 61 1.1 Yes 0 0 No -24 0.57 No 46 66.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90973982 - NM_002485 NBN 0 . . . 6.65 88.17 11 4.64 No 34 1.18 Yes 0 0 No -23 0.7 Yes 49 73.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215604840 - NM_000465 BARD1 0 . . . 3.38 76.23 25 4.75 No 11 0.71 No 0 0 No -20 0.46 No 47 75.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68801900 + NM_133509 RAD51B 0 . . . 3.03 80.38 25 4.53 No 22 -2.61 No 0 0 No -24 0.76 Yes 36 64.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131950428 + NM_005732 RAD50 0 . . . 2.82 62.47 30 3.85 No 30 0.54 No 0 0 No -26 0.61 No 25 82.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94199202 - NM_005591 MRE11 0 . . . 2.65 77.02 52 5.22 No 6 0.68 No 0 0 No -51 0.64 No 52 48.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68550379 + NM_133509 RAD51B 0 . . . 1.24 75.92 13 5.05 No 69 -3.99 No 0 0 No -22 0.32 No 38 65.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68291019 + NM_133509 RAD51B 0 . . . 4.98 84.79 16 5.2 No 2 1.51 Yes 0 0 No -20 0.63 No 48 51.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48027244 + NM_000179 MSH6 0 . . . 1.73 70 15 5.86 Yes 21 0.26 No 0 0 No -26 0.56 No 37 90.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48028771 + NM_000179 MSH6 0 . . . 3.72 70.43 16 4.69 No 55 1.4 Yes 0 0 No -23 0.67 Yes 40 88.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45799516 - NM_001048171 MUTYH 0 . . . 5.36 80.64 24 5.14 No 6 0.66 No 0 0 No -23 0.59 No 46 44.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68699600 + NM_133509 RAD51B 0 . . . 7.96 86.87 19 7.07 Yes 71 1.23 Yes 0 0 No -31 0.48 No 43 83.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47803772 + NM_000251 MSH2 0 . . . 0.32 61.73 27 4.47 No 22 0.66 No 0 0 No -26 0.96 Yes 49 35.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108196568 + NM_000051 ATM 0 . . . 6.98 74.51 18 4.21 No 18 0.58 No 0 0 No -34 0.47 No 40 53.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69024944 + NM_133509 RAD51B 0 . . . 0.84 71.63 39 6.79 Yes 17 0.33 No 0 0 No -30 0.68 Yes 41 81.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68345535 + NM_133509 RAD51B 0 . . . 1.23 84.88 16 4.42 No 27 1.42 Yes 0 0 No -21 0.65 No 25 40.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90947820 - NM_002485 NBN 0 . . . 3.91 76.52 22 6.03 Yes 30 1.36 Yes 0 0 No -21 0.75 Yes 17 48.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108197210 + NM_000051 ATM 0 . . . 5.05 81.25 41 7.68 Yes 7 0.69 No 0 0 No -40 0.47 No 51 82.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41213646 - NM_007294 BRCA1 0 . . . 0.38 76.63 24 5.09 No 58 -3.87 No 0 0 No -23 0.51 No 50 55.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68873166 + NM_133509 RAD51B 0 . . . 3.38 68.26 10 3.73 No 19 0.18 No 0 0 No -22 0.65 No 39 72.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131934678 + NM_005732 RAD50 0 . . . 0.11 69.38 22 4.63 No 6 2.15 Yes 0 0 No -21 0.45 No 37 87.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7578435 - NM_000546 TP53 0 . . . 1.43 71.79 48 6.29 Yes 41 0.75 No 0 0 No -30 0.62 No 22 26.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68827147 + NM_133509 RAD51B 0 . . . 1.64 74.51 24 7.1 Yes 65 1.33 Yes 0 0 No -24 0.43 No 19 71.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131976211 + NM_005732 RAD50 0 . . . 1.09 71.14 15 4.87 No 66 1.01 Yes 0 0 No -22 0.43 No 28 41.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59858780 - NM_032043 BRIP1 0 . . . 0.1 57.84 74 7.2 Yes 56 0.82 Yes 0 0 No -37 0.51 No 33 68.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47797787 + NM_000251 MSH2 0 . . . 1.79 67.47 28 5.29 No 19 1.16 Yes 0 0 No -27 0.5 No 39 87.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68594618 + NM_133509 RAD51B 0 . . . 8.56 85.99 28 6.47 Yes 68 0.68 No 0 0 No -27 0.92 Yes 36 80.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108171759 + NM_000051 ATM 0 . . . 0.53 62.2 14 5 No -2 0.72 No 0 0 No -28 0.67 Yes 60 44.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68612589 + NM_133509 RAD51B 0 . . . 0.06 62.54 12 5.2 No -1 0.11 No 0 0 No -20 0.65 No 50 81.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215595513 - NM_000465 BARD1 0 . . . 3.42 73.29 97 10.49 Yes 64 1.17 Yes 0 0 No -27 0.7 Yes 32 60.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108099460 + NM_000051 ATM 0 . . . 1.85 73.23 20 4.84 No 56 1.26 Yes 0 0 No -29 0.47 No 46 66.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68694698 + NM_133509 RAD51B 0 . . . 1.64 70.78 24 4.92 No 49 0.53 No 0 0 No -23 0.8 Yes 51 55.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94175695 - NM_005591 MRE11 0 . . . 5.43 73.03 24 6.4 Yes 5 0.54 No 0 0 No -23 0.85 Yes 50 48.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59783449 - NM_032043 BRIP1 0 . . . 5.19 69.58 18 4.9 No 70 -5.47 No 0 0 No -17 0.52 No 44 81.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21975408 - NM_000077 CDKN2A 0 . . . 5.47 71.59 48 6.7 Yes 20 0.35 No 0 0 No -20 0.85 Yes 38 74.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29087250 - NM_001005735 CHEK2 0 . . . 5.71 82.31 18 4.88 No 58 0.63 No 0 0 No -17 0.42 No 43 48.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538750 + NM_133509 RAD51B 0 . . . 2.59 0 38 6.38 Yes 12 0.4 No 0 0 No -24 0.73 Yes 46 91.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69124297 + NM_133509 RAD51B 0 . . . 0.35 0 23 5.35 No 4 0.86 Yes 0 0 No -29 0.41 No 54 57.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89644418 + NM_000314 PTEN 0 . . . 3.84 65.11 15 5.06 No 74 -6.08 No 0 0 No -22 0.45 No 41 56.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59930447 - NM_032043 BRIP1 0 . . . 6.8 81.91 24 5.48 No 1 0.9 Yes 0 0 No -23 0.85 Yes 46 73.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21996303 - NM_000077 CDKN2A 0 . . . 0.14 0 24 4.73 No 35 0.65 No 0 0 No -26 0.54 No 23 32.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68560193 + NM_133509 RAD51B 0 . . . 2.11 0 23 7.27 Yes 60 0.53 No 0 0 No -22 0.73 Yes 46 91.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68973226 + NM_133509 RAD51B 0 . . . 0.59 67.23 19 3.73 No 48 -4.77 No 0 0 No -22 0.53 No 51 41.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68735116 + NM_133509 RAD51B 0 . . . 11.46 92.22 19 4.96 No 24 1.4 Yes 0 0 No -27 0.73 Yes 34 86.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68297300 + NM_133509 RAD51B 0 . . . 3.6 85.02 15 5.39 No 4 1.2 Yes 0 0 No -22 0.45 No 43 74.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68709815 + NM_133509 RAD51B 0 . . . 2.99 74.34 21 5 No 0 0.3 No 0 0 No -20 0.6 No 41 65.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47781761 + NM_000251 MSH2 0 . . . 0.78 75.16 34 5.8 Yes 70 -4.86 No 0 0 No -33 0.57 No 44 34.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47804031 + NM_000251 MSH2 0 . . . 0.86 0 28 7.31 Yes 6 1.44 Yes 0 0 No -27 0.75 Yes 21 85.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68862456 + NM_133509 RAD51B 0 . . . 6.2 73 38 5.17 No 15 -1.76 No 0 0 No -31 0.78 Yes 43 88.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7577723 - NM_000546 TP53 0 . . . 0.92 76.63 21 4.93 No 58 -4.25 No 0 0 No -20 0.31 No 48 74.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37042474 + NM_000249 MLH1 0 . . . 2.21 70.29 22 5.69 Yes 37 1.02 Yes 0 0 No -28 0.66 No 17 58.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89656406 + NM_000314 PTEN 0 . . . 4.22 77.77 19 5 No 63 0.7 No 0 0 No -18 0.72 Yes 46 52.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59892027 - NM_032043 BRIP1 0 . . . 7.7 78.59 12 4.24 No 68 0.23 No 0 0 No -20 0.7 Yes 49 52.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108143566 + NM_000051 ATM 0 . . . 3.41 80.43 34 7.75 Yes 70 0.29 No 0 0 No -33 0.57 No 46 63.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131902334 + NM_005732 RAD50 0 . . . 4.18 78.31 13 3.58 No 73 0.95 Yes 0 0 No -36 0.73 Yes 47 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68962963 + NM_133509 RAD51B 0 . . . 5.54 71.26 20 5 No 74 -3.58 No 0 0 No -42 0.32 No 36 69.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68844244 + NM_004360 CDH1 0 . . . 3.81 0 31 7.44 Yes 73 -4.17 No 0 0 No -34 0.67 Yes 51 91.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68826966 + NM_004360 CDH1 0 . . . 5.56 83.04 63 11.39 Yes 31 0.42 No 0 0 No -29 0.44 No 49 43.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37046337 + NM_000249 MLH1 0 . . . 4.04 78.08 36 6.4 Yes 7 0.95 Yes 0 0 No -35 0.64 No 51 82.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68801311 + NM_004360 CDH1 0 . . . 0.42 74.73 18 4.96 No 36 1.25 Yes 0 0 No -21 0.49 No 22 71.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105188660 + NM_021930 RINT1 0 . . . 8.87 86.34 19 4.64 No 8 1.65 Yes 0 0 No -19 0.41 No 50 93.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68365581 + NM_133509 RAD51B 0 . . . 2.25 60.98 32 5.73 Yes 69 -5.9 No 0 0 No -32 0.65 No 46 55.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071725 + NM_133509 RAD51B 0 . . . 5.13 83.31 14 4.47 No 40 0.37 No 0 0 No -18 0.28 No 45 43.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215616835 - NM_000465 BARD1 0 . . . 3.12 70.76 21 5.37 No 57 -3.85 No 0 0 No -28 0.54 No 49 84.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68732961 + NM_133509 RAD51B 0 . . . 6.31 82.32 34 7.52 Yes 67 0.83 Yes 0 0 No -33 0.68 Yes 50 53.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68775946 + NM_133509 RAD51B 0 . . . 1.9 76.85 33 8.6 Yes 3 1.04 Yes 0 0 No -24 0.48 No 50 56.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41223187 - NM_007294 BRCA1 0 . . . 3.91 77.5 25 6.16 Yes 6 1.31 Yes 0 0 No -24 0.91 Yes 43 87.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190673184 + NM_000534 PMS1 0 . . . 2.44 63.49 43 7.87 Yes 45 0.41 No 0 0 No -42 0.82 Yes 40 43.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108125560 + NM_000051 ATM 0 . . . 2.24 80.12 28 5.05 No 7 0.59 No 0 0 No -28 0.35 No 51 65.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68764119 + NM_133509 RAD51B 0 . . . 7.32 81.76 10 4.69 No 55 0.14 No 0 0 No -22 0.42 No 47 66.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37049274 + NM_000249 MLH1 0 . . . 0.13 74.23 24 5.23 No 4 0.15 No 0 0 No -26 0.67 Yes 54 88.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32940350 + NM_000059 BRCA2 0 . . . 7.22 81.21 9 3.87 No 14 0.54 No 0 0 No -31 0.32 No 48 69.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23629764 - NM_024675 PALB2 0 . . . 6.04 82 21 5.2 No 33 0.58 No 0 0 No -20 0.83 Yes 48 83.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59788363 - NM_032043 BRIP1 0 . . . 3.41 0 30 6 Yes 19 -0.42 No 0 0 No -29 0.74 Yes 39 16.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94168358 - NM_005591 MRE11 0 . . . 5.92 85.36 18 5.33 No 67 0.91 Yes 0 0 No -17 0.39 No 40 79.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131922740 + NM_005732 RAD50 0 . . . 0.1 69.92 31 6.08 Yes 60 -4.85 No 0 0 No -30 0.71 Yes 51 44.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190737403 + NM_000534 PMS1 0 . . . 3.75 84.95 26 4.94 No 22 -1.18 No 0 0 No -25 0.75 Yes 15 47.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68824342 + NM_004360 CDH1 0 . . . 4.61 81.22 19 4.8 No 15 1.1 Yes 0 0 No -18 0.66 Yes 43 94.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68434354 + NM_133509 RAD51B 0 . . . 3.14 81.11 30 5.47 No 17 0.29 No 0 0 No -29 0.82 Yes 48 68.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84398187 - NM_139076 FAM175A 0 . . . 1.69 66.65 20 5.1 No 19 0.37 No 0 0 No -25 0.6 No 39 49.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37084917 + NM_000249 MLH1 0 . . . 0.67 72.23 44 7.15 Yes 11 1.05 Yes 0 0 No -35 0.5 No 47 93.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68891079 + NM_133509 RAD51B 0 . . . 0.71 72.86 22 4.6 No 76 0.79 Yes 0 0 No -25 0.8 Yes 44 29.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68495219 + NM_133509 RAD51B 0 . . . 6.04 83.23 9 4.58 No 24 0.11 No 0 0 No -54 0.39 No 45 60.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47641505 + NM_000251 MSH2 0 . . . 3.72 84.88 15 4.97 No 5 1.51 Yes 0 0 No -23 0.68 Yes 53 67.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104173656 - NM_001100119 XRCC3 0 . . . 1.43 77.65 20 5.5 No 10 1.13 Yes 0 0 No -31 0.72 Yes 48 83.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105190386 + NM_021930 RINT1 0 . . . 8.38 87.48 23 5 No 58 -4.15 No 0 0 No -22 0.55 No 44 39.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104171570 - NM_001100119 XRCC3 0 . . . 5.98 72.49 22 4.69 No NA NA NA 0 0 No -21 0.97 Yes 47 31.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89643301 + NM_000314 PTEN 0 . . . 1.14 70.5 26 5.63 Yes 15 -2.62 No 0 0 No -28 0.72 Yes 39 39.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68822614 + NM_133509 RAD51B 0 . . . 5.28 74.39 40 6.51 Yes 14 0.42 No 0 0 No -39 0.6 No 44 82.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108096664 + NM_000051 ATM 0 . . . 2.53 72.69 19 4.93 No 38 -3.47 No 0 0 No -26 0.57 No 59 67.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56781734 + NM_058216 RAD51C 0 . . . 4.97 73.66 34 7.66 Yes 15 0.57 No 0 0 No -28 0.48 No 43 87.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41265873 - NM_007294 BRCA1 0 . . . 3.7 78.8 15 4.47 No 59 1.03 Yes 0 0 No -14 0.34 No 54 67.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59814138 - NM_032043 BRIP1 0 . . . 0.8 74.54 20 4.89 No 12 0.57 No 0 0 No -40 0.52 No 30 54.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48034647 + NM_000179 MSH6 0 . . . 7.51 83.56 23 4.74 No 55 0.96 Yes 0 0 No -22 0.69 Yes 45 67.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89671396 + NM_000314 PTEN 0 . . . 1.52 0 20 4.69 No 56 1.48 Yes 0 0 No -19 0.85 Yes 40 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47701143 + NM_000251 MSH2 0 . . . 0.5 66.33 15 4.51 No 75 0.38 No 0 0 No -26 0.61 No 50 48.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68818347 + NM_004360 CDH1 0 . . . 1.88 72.43 33 6.16 Yes 39 1.21 Yes 0 0 No -32 0.76 Yes 19 77.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32904238 + NM_000059 BRCA2 0 . . . 6.84 85.51 19 4.08 No 10 1.3 Yes 0 0 No -22 0.67 Yes 48 71.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47659119 + NM_000251 MSH2 0 . . . 2.99 68 34 6.17 Yes 10 0.23 No 0 0 No -19 0.85 Yes 55 27.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37052252 + NM_000249 MLH1 0 . . . 1.75 81.47 23 5.25 No 44 1.5 Yes 0 0 No -26 0.71 Yes 14 94.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190696718 + NM_000534 PMS1 0 . . . 7.04 78.89 28 6.39 Yes 21 1.73 Yes 0 0 No -27 0.43 No 37 71.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68445988 + NM_133509 RAD51B 0 . . . 3.43 73.22 18 4.77 No 43 0.14 No 0 0 No -17 0.4 No 47 42.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215663597 - NM_000465 BARD1 0 . . . 2.58 68.34 22 6 Yes 5 1.75 Yes 0 0 No -21 0.76 Yes 40 72.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59797606 - NM_032043 BRIP1 0 . . . 7.67 79.41 10 3.17 No 3 0.99 Yes 0 0 No -47 0.66 No 28 26.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32898366 + NM_000059 BRCA2 0 . . . 6.44 79.31 26 5.66 Yes 0 0.4 No 0 0 No -25 0.94 Yes 51 27.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75515312 - NM_001040108 MLH3 0 . . . 1.34 70 32 7.06 Yes 54 0.27 No 0 0 No -31 0.86 Yes 51 39.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94224524 - NM_005591 MRE11 0 . . . 0.99 62.26 31 5.74 Yes 2 0.1 No 0 0 No -26 0.77 Yes 60 36.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867047 - NM_032043 BRIP1 0 . . . 3.64 67.2 37 7.55 Yes 12 0.36 No 0 0 No -36 0.76 Yes 46 91.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69000336 + NM_133509 RAD51B 0 . . . 5.5 88.52 25 5.56 Yes 7 1.14 Yes 0 0 No -24 0.68 Yes 51 75.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68849965 + NM_004360 CDH1 0 . . . 3.3 87.6 25 5.92 Yes 2 1.28 Yes 0 0 No -24 0.89 Yes 43 63.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75496684 - NM_001040108 MLH3 0 . . . 9.49 88.27 46 6.16 Yes 13 1.51 Yes 0 0 No -32 0.48 No 45 95.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6045596 - NM_000535 PMS2 0 . . . 5.95 88.26 31 5.87 Yes 69 1.45 Yes 0 0 No -24 0.56 No 50 42.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68869863 + NM_004360 CDH1 0 . . . 1.98 0 12 4.9 No 58 0.34 No 0 0 No -18 0.57 No 49 61.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68815910 + NM_004360 CDH1 0 . . . 5.66 82.57 21 4.69 No 33 -2.11 No 0 0 No -20 0.95 Yes 41 44.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59843907 - NM_032043 BRIP1 0 . . . 3.58 75.86 39 6.69 Yes 20 0.66 No 0 0 No -26 0.6 No 21 45.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68798577 + NM_004360 CDH1 0 . . . 1.03 76.43 20 5.57 Yes 76 -4.06 No 0 0 No -19 0.63 No 39 73.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94165040 - NM_005591 MRE11 0 . . . 2.72 66.79 20 5.1 No 51 1.17 Yes 0 0 No -19 0.44 No 46 38.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40987824 + NM_001164269 RAD51 0 . . . 0.22 0 33 6.24 Yes -4 -2.18 No 0 0 No -32 0.86 Yes 57 25.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108210277 + NM_000051 ATM 0 . . . 1.3 62.66 42 5.58 Yes 26 0.16 No 0 0 No -26 0.55 No 32 93.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215605107 - NM_000465 BARD1 0 . . . 1.75 68.26 9 4.47 No 39 -4.21 No 0 0 No -19 0.7 Yes 51 63.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48021455 + NM_000179 MSH6 0 . . . 3.29 87.6 21 4.66 No 47 0.36 No 0 0 No -38 0.33 No 23 92.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89648406 + NM_000314 PTEN 0 . . . 2.39 75.58 31 5.56 Yes 14 0.66 No 0 0 No -27 0.6 No 18 30.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41233962 - NM_007294 BRCA1 0 . . . 6.69 83.45 14 3.17 No 50 0.52 No 0 0 No -41 0.77 Yes 47 83.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68839730 + NM_004360 CDH1 0 . . . 0.49 0 20 4.57 No 55 0.89 Yes 0 0 No -19 0.34 No 58 54.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37075870 + NM_000249 MLH1 0 . . . 2.62 68.81 25 5.2 No 46 -2.57 No 0 0 No -24 0.72 Yes 46 69.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215594798 - NM_000465 BARD1 0 . . . 3.83 66.05 18 5.2 No 41 0.51 No 0 0 No -23 0.49 No 40 72.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69090840 + NM_133509 RAD51B 0 . . . 3.34 83.13 45 7.19 Yes 13 0.66 No 0 0 No -34 0.55 No 45 97.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68939940 + NM_133509 RAD51B 0 . . . 4.99 80.81 36 5.8 Yes 68 0.6 No 0 0 No -35 0.54 No 50 52.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52436319 - NM_004656 BAP1 0 . . . 4.87 74.93 20 6.93 Yes 17 1.63 Yes 0 0 No -29 0.63 No 41 66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69114514 + NM_133509 RAD51B 0 . . . 1.08 84.22 16 4.39 No 33 1.64 Yes 0 0 No -19 0.65 No 25 48.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59787762 - NM_032043 BRIP1 0 . . . 4.78 72.86 23 5.26 No 59 -2.12 No 0 0 No -23 0.83 Yes 43 81.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68427769 + NM_133509 RAD51B 0 . . . 4.76 89.96 21 5.2 No 58 1.27 Yes 0 0 No -20 0.81 Yes 43 73.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48022399 + NM_000179 MSH6 0 . . . 0.43 68.45 49 7.32 Yes 58 -5.6 No 0 0 No -20 0.67 Yes 45 63.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69113755 + NM_133509 RAD51B 0 . . . 1.56 0 26 5.9 Yes 32 0.44 No 0 0 No -29 0.55 No 51 79.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68980326 + NM_133509 RAD51B 0 . . . 4.86 75.7 25 5.57 Yes 8 0.4 No 0 0 No -24 0.77 Yes 50 84.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47774473 + NM_000251 MSH2 0 . . . 4.16 80.71 19 5.38 No 10 1 Yes 0 0 No -32 0.66 No 48 87.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48011964 + NM_000179 MSH6 0 . . . 8.52 84.15 18 4.83 No 38 -2.29 No 0 0 No -40 0.69 Yes 44 53.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23646365 - NM_024675 PALB2 0 . . . 2.33 71.36 30 5.08 No 38 0.81 Yes 0 0 No -23 0.52 No 51 53.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69093606 + NM_133509 RAD51B 0 . . . 4.44 82.33 35 5.64 Yes 20 0.52 No 0 0 No -22 0.67 Yes 47 47.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47647201 + NM_000251 MSH2 0 . . . 5.58 78.63 22 4.58 No 7 1.16 Yes 0 0 No -21 0.52 No 51 84.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47756352 + NM_000251 MSH2 0 . . . 1.56 0 17 5.74 Yes 70 -5.21 No 0 0 No -23 0.72 Yes 53 32.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215615030 - NM_000465 BARD1 0 . . . 5.4 64.51 28 8.61 Yes 10 0.26 No 0 0 No -25 0.6 No 48 52.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89671642 + NM_000314 PTEN 0 . . . 7.16 86.69 35 4.33 No 63 1.23 Yes 0 0 No -27 0.66 Yes 45 86.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47691382 + NM_000251 MSH2 0 . . . 0.99 75.6 28 4.64 No 40 0.41 No 0 0 No -27 0.58 No 58 37.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190657998 + NM_000534 PMS1 0 . . . 2.06 75.6 20 4.59 No 54 1.6 Yes 0 0 No -32 0.83 Yes 50 82.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47674500 + NM_000251 MSH2 0 . . . 1.87 80.12 44 6.93 Yes 6 1.13 Yes 0 0 No -37 0.45 No 52 62.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48019169 + NM_000179 MSH6 0 . . . 2.63 84.73 26 7.14 Yes 6 1.04 Yes 0 0 No -25 0.84 Yes 52 69.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68480579 + NM_133509 RAD51B 0 . . . 7.33 78.14 37 9.16 Yes 6 1.04 Yes 0 0 No -37 0.33 No 52 84.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89685222 + NM_000314 PTEN 0 . . . 2.27 66.21 26 5.6 Yes 8 -1.92 No 0 0 No -25 0.7 Yes 51 54.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68311990 + NM_133509 RAD51B 0 . . . 8.2 83.78 16 4.69 No 24 1.24 Yes 0 0 No -48 0.83 Yes 34 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131949156 + NM_005732 RAD50 0 . . . 6.43 72.78 24 4.84 No 35 1.42 Yes 0 0 No -23 0.41 No 28 82.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59870711 - NM_032043 BRIP1 0 . . . 4.59 79.55 24 5.8 Yes 4 0.82 Yes 0 0 No -23 0.78 Yes 44 82.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68490174 + NM_133509 RAD51B 0 . . . 3.37 67.17 29 5.23 No 44 1.56 Yes 0 0 No -28 0.52 No 40 41.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68605669 + NM_133509 RAD51B 0 . . . 0.13 70.32 31 5.74 Yes 49 0.59 No 0 0 No -28 0.77 Yes 55 53.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90996865 - NM_002485 NBN 0 . . . 2.97 77.54 20 5.79 Yes 50 -3.1 No 24 0.79 Yes -27 0.71 Yes 52 36.1 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr17 41208936 - NM_007294 BRCA1 0 . . . 4.15 85.66 22 5.61 Yes 25 -1.62 No 0 0 No -28 0.44 No 48 32.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41220813 - NM_007294 BRCA1 0 . . . 4.21 66.13 11 4.26 No -4 1.55 Yes 0 0 No -21 0.33 No 47 79.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68287014 + NM_133509 RAD51B 0 . . . 1.86 68.19 29 4.53 No 21 -1.56 No 0 0 No -28 0.58 No 49 70.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69139663 + NM_133509 RAD51B 0 . . . 2.82 74.98 19 5.16 No -4 0.26 No 0 0 No -27 0.84 Yes 50 34.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105207663 + NM_021930 RINT1 0 . . . 0.71 82.39 27 5.2 No 61 -3.61 No 0 0 No -26 0.48 No 50 87.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68301238 + NM_133509 RAD51B 0 . . . 0.57 77.31 22 4.72 No 40 0.94 Yes 0 0 No -21 0.49 No 49 47.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68999565 + NM_133509 RAD51B 0 . . . 4.49 73.47 26 5.07 No 65 0.06 No 0 0 No -25 0.67 Yes 45 92.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68792095 + NM_004360 CDH1 0 . . . 1.43 0 81 7.61 Yes 45 0.37 No 0 0 No -53 0.69 Yes 13 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21976471 - NM_000077 CDKN2A 0 . . . 7.92 83.56 22 5.2 No 11 0.85 Yes 0 0 No -30 0.47 No 42 81.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131962161 + NM_005732 RAD50 0 . . . 5.45 63.69 21 5.62 Yes 16 1.07 Yes 0 0 No -30 0.76 Yes 42 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131926729 + NM_005732 RAD50 0 . . . 2.67 65.66 28 6 Yes 50 1.51 Yes 0 0 No -27 0.72 Yes 44 54.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48018715 + NM_000179 MSH6 0 . . . 8.56 91.61 20 6.53 Yes 3 1.3 Yes 0 0 No -30 0.79 Yes 48 46.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68780410 + NM_133509 RAD51B 0 . . . 5.09 77.32 21 4.78 No 70 0.24 No 0 0 No -20 0.77 Yes 45 90.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68606908 + NM_133509 RAD51B 0 . . . 2.57 80.24 24 4.56 No 60 -4.24 No 0 0 No -23 0.81 Yes 45 49.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108163944 + NM_000051 ATM 0 . . . 6.82 76.81 36 5.57 Yes 58 0.25 No 0 0 No -25 0.64 No 46 75.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21975582 - NM_000077 CDKN2A 0 . . . 5.88 88.4 15 4.95 No 68 0.75 No 0 0 No -25 0.35 No 49 42.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47649675 + NM_000251 MSH2 0 . . . 3.24 73.97 36 7.1 Yes 53 0.87 Yes 0 0 No -31 0.63 No 42 73.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68874845 + NM_133509 RAD51B 0 . . . 1.52 63.89 19 4.66 No 1 0.36 No 0 0 No -18 0.56 No 50 27.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59926381 - NM_032043 BRIP1 0 . . . 0.73 67.47 27 5.73 Yes 32 0.02 No 0 0 No -26 0.94 Yes 52 39.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69097063 + NM_133509 RAD51B 0 . . . 9.31 79.27 27 5.48 No 36 2.27 Yes 0 0 No -21 0.43 No 22 69.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68944667 + NM_133509 RAD51B 0 . . . 3.98 73.21 40 7.14 Yes 4 0.5 No 0 0 No -39 0.57 No 47 38.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108137028 + NM_000051 ATM 0 . . . 1.2 67.82 14 6 Yes 28 -3.68 No 0 0 No -37 0.86 Yes 43 54.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68362793 + NM_133509 RAD51B 0 . . . 1.09 70.19 25 5 No 11 0.94 Yes 0 0 No -25 0.63 No 24 62.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190667353 + NM_000534 PMS1 0 . . . 0.25 0 15 5.68 Yes -3 0.02 No 0 0 No -30 0.62 No 33 66.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59809181 - NM_032043 BRIP1 0 . . . 5.78 75.95 35 5.83 Yes 1 1.08 Yes 0 0 No -24 0.4 No 44 82.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68815650 + NM_133509 RAD51B 0 . . . 4.25 84.88 47 5.71 Yes 37 1.72 Yes 0 0 No -39 0.4 No 46 31.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108154229 + NM_000051 ATM 0 . . . 3.1 76.56 35 8.15 Yes 42 0.64 No 0 0 No -34 0.62 No 41 72.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75485095 - NM_001040108 MLH3 0 . . . 1.28 71.56 12 3.38 No 55 0.95 Yes 0 0 No -36 0.84 Yes 48 70.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33443062 - NM_002878 RAD51D 0 . . . 0.26 66.15 13 3.94 No 57 1.98 Yes 0 0 No -18 0.6 No 13 82.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68634312 + NM_133509 RAD51B 0 . . . 5.95 79.24 19 3.09 No 8 1.12 Yes 0 0 No -19 0.47 No 47 56.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152374779 - NM_005431 XRCC2 0 . . . 4.98 76.6 24 5.2 No 39 0.83 Yes 0 0 No -23 0.8 Yes 45 60.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68601943 + NM_133509 RAD51B 0 . . . 0.17 0 23 5.83 Yes 51 1.57 Yes 0 0 No -25 0.69 Yes 43 43.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104181063 - NM_001100119 XRCC3 0 . . . 2.3 81.39 25 5.48 No 64 0.1 No 0 0 No -24 0.76 Yes 53 53.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68354315 + NM_133509 RAD51B 0 . . . 0.92 60.76 35 5.13 No 51 -1.95 No 0 0 No -21 0.55 No 48 65.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40991895 + NM_001164269 RAD51 0 . . . 6.99 70.14 13 3.87 No 69 -3.57 No 0 0 No -29 0.62 No 49 64.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68798087 + NM_004360 CDH1 0 . . . 4.07 69.56 24 5.96 Yes 75 -5.51 No 0 0 No -32 0.51 No 46 59.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215590303 - NM_000465 BARD1 0 . . . 1.45 63.67 13 3.67 No 36 0.93 Yes 0 0 No -20 0.8 Yes 45 58.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29119686 - NM_001005735 CHEK2 0 . . . 3.68 70.85 14 5.35 No 27 0.42 No 0 0 No -33 0.79 Yes 44 72.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33434614 - NM_002878 RAD51D 0 . . . 4.82 84.2 35 6.4 Yes 48 -3.85 No 0 0 No -34 0.64 No 44 65.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68537477 + NM_133509 RAD51B 0 . . . 3.56 89.86 11 3.35 No 36 1.43 Yes 0 0 No -56 0.46 No 49 91.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89663961 + NM_000314 PTEN 0 . . . 6.76 87.63 30 5.45 No 33 1.22 Yes 0 0 No -21 0.63 No 25 56.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90984180 - NM_002485 NBN 0 . . . 2.73 84.48 34 5.82 Yes 67 0.56 No 0 0 No -27 0.47 No 48 56.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94172390 - NM_005591 MRE11 0 . . . 2.51 75.95 15 4.58 No 15 0.96 Yes 0 0 No -20 0.69 Yes 43 63.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47683769 + NM_000251 MSH2 0 . . . 2.49 62.91 40 5.64 Yes 41 0.73 No 0 0 No -28 0.34 No 38 66.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33441399 - NM_002878 RAD51D 0 . . . 3.45 81.56 17 5.39 No 73 0.54 No 0 0 No -19 0.6 No 52 49.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68913253 + NM_133509 RAD51B 0 . . . 8.92 92.19 29 5.66 Yes 20 1.07 Yes 0 0 No -28 0.73 Yes 38 46.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68953864 + NM_133509 RAD51B 0 . . . 1.7 69.05 13 4.6 No 18 -2.04 No 0 0 No -16 0.25 No 59 26.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68537678 + NM_133509 RAD51B 0 . . . 4.87 78.12 17 5.29 No -1 1.22 Yes 0 0 No -25 0.45 No 39 73.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29120516 - NM_001005735 CHEK2 0 . . . 4.8 76.86 37 6.59 Yes 4 0.48 No 0 0 No -36 0.42 No 47 84.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23637189 - NM_024675 PALB2 0 . . . 1.75 65.93 21 4.89 No 7 1.8 Yes 0 0 No -20 0.61 No 39 85.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1216009 + NM_000455 STK11 0 . . . 0.29 79.92 27 5.01 No 33 1.51 Yes 0 0 No -55 0.69 Yes 25 32.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69143227 + NM_133509 RAD51B 0 . . . 6.43 77.47 18 5.94 Yes 66 -4.83 No 0 0 No -21 0.6 No 43 76.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89697410 + NM_000314 PTEN 0 . . . 4.11 79.97 27 5.1 No 75 -3.57 No 0 0 No -26 0.94 Yes 24 73.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32915579 + NM_000059 BRCA2 0 . . . 2.27 73.91 33 4.63 No -2 0.11 No 0 0 No -25 0.93 Yes 52 48.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68538346 + NM_133509 RAD51B 0 . . . 0.8 61.54 27 5.32 No 38 0.5 No 0 0 No -26 0.73 Yes 44 38.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69061228 + NM_133509 RAD51B 0 . . . 2.92 72.13 15 4.58 No 42 1.49 Yes 0 0 No -19 0.62 No 16 68.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68969198 + NM_133509 RAD51B 0 . . . 0.22 72.32 36 7.45 Yes 50 0.15 No 0 0 No -24 0.79 Yes 51 52.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6014816 - NM_000535 PMS2 0 . . . 3.09 76.36 24 5.21 No 66 -2.11 No 0 0 No -23 0.84 Yes 49 73.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68861603 + NM_133509 RAD51B 0 . . . 1.26 0 35 5.14 No 74 -1.08 No 0 0 No -28 0.56 No 40 52.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68970724 + NM_133509 RAD51B 0 . . . 1.93 79.47 15 5.39 No 45 -4 No 0 0 No -56 0.27 No 43 88.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21966582 - NM_000077 CDKN2A 0 . . . 6.86 76.52 13 5.29 No 6 0.6 No 0 0 No -22 0.55 No 44 59.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215656496 - NM_000465 BARD1 0 . . . 3.59 74.76 18 4.65 No 4 0.5 No 0 0 No -17 0.5 No 43 50.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41249212 - NM_007294 BRCA1 0 . . . 5.86 81.69 19 4.67 No 57 -2.76 No 0 0 No -18 0.53 No 45 83.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68786577 + NM_133509 RAD51B 0 . . . 1.92 70.56 24 5.29 No 24 0.49 No 0 0 No -30 0.64 No 47 74.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68720829 + NM_133509 RAD51B 0 . . . 2.25 73.06 16 5.57 Yes 72 0.84 Yes 0 0 No -27 0.7 Yes 51 32.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48018215 + NM_000179 MSH6 0 . . . 1.35 87.71 29 5.55 No 52 0.47 No 0 0 No -24 0.61 No 48 94.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32944210 + NM_000059 BRCA2 0 . . . 8.42 82.77 22 5.4 No 31 1.5 Yes 0 0 No -21 0.63 No 34 65.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68903850 + NM_133509 RAD51B 0 . . . 7.14 87.9 33 5.74 Yes 4 1.81 Yes 0 0 No -26 0.76 Yes 38 94.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68620442 + NM_133509 RAD51B 0 . . . 0.81 58.92 28 5.42 No 58 0.82 Yes 0 0 No -31 0.72 Yes 39 65.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7575180 - NM_000546 TP53 0 . . . 2.9 83.14 28 5.57 Yes 75 1.09 Yes 0 0 No -25 0.79 Yes 50 86.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215604137 - NM_000465 BARD1 0 . . . 5.61 79.36 27 4.57 No -1 0.62 No 0 0 No -26 0.6 No 47 38.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32936830 + NM_000059 BRCA2 0 . . . 3.61 70.5 13 4.71 No 23 0.43 No 0 0 No -21 0.9 Yes 57 37.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47653636 + NM_000251 MSH2 0 . . . 3.38 81.57 34 6.15 Yes 37 1.01 Yes 0 0 No -33 0.83 Yes 21 63.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56799153 + NM_058216 RAD51C 0 . . . 5.35 67.44 21 4.69 No 33 0.4 No 0 0 No -20 0.79 Yes 37 82.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68758526 + NM_133509 RAD51B 0 . . . 5.37 75.62 24 7.09 Yes 11 0.89 Yes 0 0 No -28 0.94 Yes 47 70.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68500046 + NM_133509 RAD51B 0 . . . 6.06 82.08 29 6.46 Yes 2 1.09 Yes 0 0 No -28 0.91 Yes 40 43.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68810732 + NM_133509 RAD51B 0 . . . 1.16 80.22 36 5.21 No 49 -3.98 No 0 0 No -30 0.59 No 48 62.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68403813 + NM_133509 RAD51B 0 . . . 4.32 73.66 15 5.38 No 49 0.6 No 0 0 No -22 0.62 No 39 48.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108128427 + NM_000051 ATM 0 . . . 3.87 67 38 5.95 Yes 30 -1.96 No 0 0 No -34 0.5 No 44 74.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7592688 - NM_000546 TP53 0 . . . 3.95 77.32 22 4.69 No 56 0.25 No 0 0 No -21 0.88 Yes 48 41.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47690534 + NM_000251 MSH2 0 . . . 4.04 81.73 14 5.64 Yes 49 0.1 No 0 0 No -17 0.34 No 50 71.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59849128 - NM_032043 BRIP1 0 . . . 0.42 74.73 15 4.74 No 35 1.17 Yes 0 0 No -24 0.82 Yes 23 67.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131950107 + NM_005732 RAD50 0 . . . 3.96 73.06 32 5.22 No 3 0.79 Yes 0 0 No -22 0.5 No 46 41.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215629218 - NM_000465 BARD1 0 . . . 4.33 71.16 22 5.29 No 14 0.99 Yes 0 0 No -39 0.52 No 44 61.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41200801 - NM_007294 BRCA1 0 . . . 1.12 77.18 17 5.83 Yes 74 0.53 No 0 0 No -23 0.6 No 54 81.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68746424 + NM_133509 RAD51B 0 . . . 1.62 79.72 43 6.53 Yes 25 0.53 No 0 0 No -27 0.69 Yes 26 61.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108222388 + NM_000051 ATM 0 . . . 1.24 71.83 24 7.48 Yes 46 1.18 Yes 0 0 No -23 0.61 No 19 41.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41270228 - NM_007294 BRCA1 0 . . . 3.29 80.65 40 5.54 No 49 -4.85 No 0 0 No -46 0.81 Yes 46 33.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68858451 + NM_133509 RAD51B 0 . . . 0.46 67.01 11 5.07 No 57 0.61 No 0 0 No -24 0.76 Yes 18 47.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68747031 + NM_133509 RAD51B 0 . . . 1.57 72.52 23 5.83 Yes 62 0.01 No 0 0 No -28 0.55 No 39 39.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1221589 + NM_000455 STK11 0 . . . 7.56 79.5 43 5.48 No 67 1.25 Yes 0 0 No -43 0.58 No 46 48.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108215796 + NM_000051 ATM 0 . . . 6.14 77.87 30 5.63 Yes 61 0.93 Yes 0 0 No -30 0.46 No 42 51.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68923748 + NM_133509 RAD51B 0 . . . 1.1 86.33 45 5.72 Yes 76 1.46 Yes 0 0 No -31 0.45 No 50 49.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190704317 + NM_000534 PMS1 0 . . . 7.22 72.81 13 5.26 No -1 0.48 No 0 0 No -24 0.9 Yes 41 68.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68823671 + NM_133509 RAD51B 0 . . . 1.73 76.63 28 6.13 Yes 15 0.33 No 0 0 No -32 0.69 Yes 43 71.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23616671 - NM_024675 PALB2 0 . . . 0.41 77.13 37 6 Yes 0 1.33 Yes 0 0 No -32 0.49 No 54 55.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68773758 + NM_133509 RAD51B 0 . . . 4.12 77.15 36 5.9 Yes 23 0.96 Yes 0 0 No -32 0.61 No 35 85.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6011326 - NM_000535 PMS2 0 . . . 2.63 64.71 18 5.17 No 68 -5.24 No 0 0 No -21 0.74 Yes 44 73.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59800369 - NM_032043 BRIP1 0 . . . 0.54 67.03 15 5.29 No 32 0.5 No 0 0 No -21 0.61 No 43 61.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89699262 + NM_000314 PTEN 0 . . . 3.6 85.02 38 7.07 Yes 4 1.2 Yes 0 0 No -37 0.56 No 54 73.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47755877 + NM_000251 MSH2 0 . . . 0.22 64.87 17 3.56 No 52 0.69 No 0 0 No -52 0.46 No 34 32.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75490482 - NM_001040108 MLH3 0 . . . 2.48 0 17 4.9 No 46 -5.19 No 0 0 No -30 0.94 Yes 52 88.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68561275 + NM_133509 RAD51B 0 . . . 1.29 71.51 75 8.06 Yes 20 0.18 No 0 0 No -26 0.58 No 26 29.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68929719 + NM_133509 RAD51B 0 . . . 4.55 78.02 24 5.85 Yes 73 0.11 No 0 0 No -23 0.56 No 52 74.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215638483 - NM_000465 BARD1 0 . . . 2.85 70.62 27 5.74 Yes 19 -3.2 No 0 0 No -26 0.69 Yes 35 71.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108199565 + NM_000051 ATM 0 . . . 0.92 60.44 17 6.37 Yes 33 0.73 No 0 0 No -25 0.59 No 33 40.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47739715 + NM_000251 MSH2 0 . . . 6.7 88.41 21 7.42 Yes 3 0.79 Yes 0 0 No -20 0.87 Yes 49 46.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40986038 + NM_001164269 RAD51 0 . . . 3.75 72.94 53 8.49 Yes 25 0.74 No 0 0 No -52 0.96 Yes 38 84.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105182194 + NM_021930 RINT1 0 . . . 0.92 76.63 22 5.25 No 67 -6.43 No 0 0 No -21 0.4 No 48 77.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68324683 + NM_133509 RAD51B 0 . . . 3 66.64 27 5.12 No 65 -4.97 No 0 0 No -26 0.82 Yes 41 40.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59844468 - NM_032043 BRIP1 0 . . . 1.18 0 13 4.8 No 24 1.1 Yes 0 0 No -38 0.67 Yes 34 52.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6041889 - NM_000535 PMS2 0 . . . 7.82 78.8 19 7.07 Yes 15 0.44 No 0 0 No -18 0.75 Yes 47 69.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69061463 + NM_133509 RAD51B 0 . . . 3.4 76.71 23 4.69 No 54 -1.32 No 0 0 No -21 0.71 Yes 50 71.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32938494 + NM_000059 BRCA2 0 . . . 2.86 71.41 20 4.47 No 75 -3.19 No 0 0 No -19 0.87 Yes 35 79.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90951574 - NM_002485 NBN 0 . . . 2.06 77.36 23 3.85 No 37 0.46 No 0 0 No -18 0.71 Yes 21 88.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68432195 + NM_133509 RAD51B 0 . . . 5.77 82.33 16 5.04 No 44 1.77 Yes 0 0 No -20 0.85 Yes 30 76.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59859912 - NM_032043 BRIP1 0 . . . 6.75 79.56 30 5.91 Yes 20 0.66 No 0 0 No -29 0.78 Yes 38 91.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89728948 + NM_000314 PTEN 0 . . . 4.64 79.64 20 4.8 No 69 -2.2 No 0 0 No -19 0.92 Yes 28 71.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37075754 + NM_000249 MLH1 0 . . . 0.86 69.65 21 4.33 No 42 -3.88 No 0 0 No -28 0.79 Yes 54 39.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68608447 + NM_133509 RAD51B 0 . . . 5.26 77.21 30 5.39 No 34 1.01 Yes 0 0 No -29 0.62 No 46 58.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94160512 - NM_005591 MRE11 0 . . . 2.86 87.5 19 5.09 No 6 0.03 No 0 0 No -25 0.77 Yes 52 65.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68844499 + NM_133509 RAD51B 0 . . . 4.06 75.11 17 3.89 No 9 1.15 Yes 0 0 No -19 0.7 Yes 49 90.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29114869 - NM_001005735 CHEK2 0 . . . 8.65 67.33 47 7.27 Yes 36 -0.83 No 0 0 No -46 0.44 No 22 46.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190661310 + NM_000534 PMS1 0 . . . 5.97 69.19 28 5.24 No 18 1.71 Yes 0 0 No -27 0.83 Yes 40 97.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68966919 + NM_133509 RAD51B 0 . . . 3.74 69.42 15 5.39 No 5 1.12 Yes 0 0 No -14 0.65 No 41 71.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105206605 + NM_021930 RINT1 0 . . . 0.1 60.93 24 7.35 Yes 65 1.14 Yes 0 0 No -23 0.73 Yes 42 41.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68991893 + NM_133509 RAD51B 0 . . . 0.5 70.07 25 5.2 No 74 -5.62 No 0 0 No -45 0.9 Yes 54 45.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41199129 - NM_007294 BRCA1 0 . . . 0.33 66.33 22 5.53 No 74 -5.53 No 0 0 No -21 0.77 Yes 58 32.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41006680 + NM_001164269 RAD51 0 . . . 0.63 0 19 5 No 11 0.3 No 0 0 No -18 0.52 No 47 77.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190669381 + NM_000534 PMS1 0 . . . 1.65 74.29 16 4.36 No 55 1.26 Yes 0 0 No -20 0.39 No 51 66.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6038160 - NM_000535 PMS2 0 . . . 5.2 85.02 12 3.98 No 5 1.09 Yes 0 0 No -50 0.59 No 53 82.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68513834 + NM_133509 RAD51B 0 . . . 1.15 0 24 6.2 Yes 73 0.79 Yes 0 0 No -23 0.7 Yes 49 74.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32935705 + NM_000059 BRCA2 0 . . . 1.75 79.85 16 4.69 No 3 0.28 No 0 0 No -22 0.43 No 49 93.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29092731 - NM_001005735 CHEK2 0 . . . 6.25 86.02 21 5.11 No 43 2.06 Yes 0 0 No -20 0.57 No 15 48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41203785 - NM_007294 BRCA1 0 . . . 1.71 74.68 17 4.77 No 65 1.11 Yes 0 0 No -17 0.22 No 36 53.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68355592 + NM_133509 RAD51B 0 . . . 2.71 77.22 38 5.03 No 62 -4.49 No 0 0 No -43 0.51 No 48 56.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47657711 + NM_000251 MSH2 0 . . . 0.35 0 28 4.13 No 63 -3.86 No 0 0 No -19 0.66 Yes 52 70.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108238609 + NM_000051 ATM 0 . . . 1.26 66.94 28 5.38 No 72 0 No 0 0 No -24 0.41 No 44 69.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108238987 + NM_000051 ATM 0 . . . 4.45 82.43 17 3.79 No 18 -3.46 No 0 0 No -16 0.56 No 16 45.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6037562 - NM_000535 PMS2 0 . . . 1.9 71.02 24 5.29 No 48 0.77 Yes 0 0 No -23 0.92 Yes 37 48.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69044010 + NM_133509 RAD51B 0 . . . 6.01 78.31 58 7.65 Yes 18 -0.44 No 0 0 No -24 0.76 Yes 50 42.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29123750 - NM_001005735 CHEK2 0 . . . 4.77 66.57 17 3.91 No 27 0.97 Yes 0 0 No -21 0.2 No 30 60.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131935171 + NM_005732 RAD50 0 . . . 1.77 77.85 32 5.56 Yes 60 -3.62 No 0 0 No -31 0.87 Yes 49 36.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68813207 + NM_133509 RAD51B 0 . . . 0.9 65.67 24 6.01 Yes 60 0.74 No 0 0 No -23 0.69 Yes 16 72.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68293036 + NM_133509 RAD51B 0 . . . 1.23 65.86 13 4.88 No 66 2.27 Yes 0 0 No -17 0.35 No 54 37.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90987992 - NM_002485 NBN 0 . . . 1.49 0 16 3.75 No 37 0.76 No 0 0 No -30 0.61 No 37 68.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90984453 - NM_002485 NBN 0 . . . 3.71 79.29 61 6.77 Yes 39 1.45 Yes 0 0 No -24 0.89 Yes 37 58.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89660370 + NM_000314 PTEN 0 . . . 2.49 79.05 32 5.65 Yes 73 0.51 No 0 0 No -28 0.43 No 48 69.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21965924 - NM_000077 CDKN2A 0 . . . 0.64 76.92 27 5.74 Yes 46 0.67 No 0 0 No -26 0.75 Yes 12 46.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89697774 + NM_000314 PTEN 0 . . . 2.15 80.14 38 6.44 Yes 52 1.25 Yes 0 0 No -37 0.46 No 38 67.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47675245 + NM_000251 MSH2 0 . . . 4.61 78.04 22 6.98 Yes 4 2.02 Yes 0 0 No -21 0.6 No 54 86.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68678145 + NM_133509 RAD51B 0 . . . 6.85 77.59 16 3.9 No 22 0.33 No 0 0 No -32 0.85 Yes 36 86.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68546459 + NM_133509 RAD51B 0 . . . 8.92 82.26 46 6.63 Yes -3 0.63 No 0 0 No -20 0.81 Yes 42 46.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108184887 + NM_000051 ATM 0 . . . 3.76 84.95 24 5.17 No 41 1.52 Yes 0 0 No -23 0.29 No 17 87.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68671978 + NM_133509 RAD51B 0 . . . 3.07 77.8 28 5.48 No 62 0.11 No 0 0 No -27 0.89 Yes 44 90.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45795486 - NM_001048171 MUTYH 0 . . . 5.25 84.9 37 7.06 Yes 60 1.18 Yes 0 0 No -36 0.51 No 48 69.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59808995 - NM_032043 BRIP1 0 . . . 0.08 70.9 28 5.38 No 61 -5.73 No 0 0 No -27 0.82 Yes 49 46.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215623074 - NM_000465 BARD1 0 . . . 5.74 75.76 38 7.08 Yes 72 0.72 No 0 0 No -29 0.45 No 51 78.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90980424 - NM_002485 NBN 0 . . . 5.71 81.57 26 4.92 No 43 0.09 No 0 0 No -19 0.48 No 44 63.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69136874 + NM_133509 RAD51B 0 . . . 8.75 82.03 30 4.71 No 44 1.13 Yes 0 0 No -22 0.78 Yes 36 75.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1214415 + NM_000455 STK11 0 . . . 6.65 83.78 75 6.77 Yes 25 1.09 Yes 0 0 No -23 0.74 Yes 41 88.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37057255 + NM_000249 MLH1 0 . . . 2.18 69.04 25 6.08 Yes 48 1.84 Yes 0 0 No -25 0.92 Yes 45 86.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68810482 + NM_004360 CDH1 0 . . . 2.22 81.35 61 7.94 Yes 71 0.45 No 0 0 No -26 0.46 No 56 55.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32920517 + NM_000059 BRCA2 0 . . . 3.95 70.3 15 5.29 No 10 1.01 Yes 0 0 No -21 0.49 No 48 88.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68293253 + NM_133509 RAD51B 0 . . . 1.91 57.63 15 5.39 No 37 0.75 No 0 0 No -45 0.37 No 42 33.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68312074 + NM_133509 RAD51B 0 . . . 6.88 76.22 39 6.11 Yes 16 0.59 No 0 0 No -23 0.49 No 42 72.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68416403 + NM_133509 RAD51B 0 . . . 8.67 94.25 26 4.78 No 73 1.36 Yes 0 0 No -25 0.88 Yes 43 43.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68614019 + NM_133509 RAD51B 0 . . . 2.55 65.62 22 5.87 Yes 73 0.4 No 0 0 No -21 0.9 Yes 31 56.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68453710 + NM_133509 RAD51B 0 . . . 6.52 82.49 29 4.69 No 21 1.58 Yes 0 0 No -25 0.64 No 47 60.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69071209 + NM_133509 RAD51B 0 . . . 4.83 78.67 21 5.2 No 68 1.43 Yes 0 0 No -20 0.87 Yes 29 44.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68891512 + NM_133509 RAD51B 0 . . . 0.26 84.41 33 5.82 Yes 9 1.32 Yes 0 0 No -32 0.63 No 49 62.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37085796 + NM_000249 MLH1 0 . . . 3.37 68.34 20 4.64 No 23 1.6 Yes 0 0 No -22 0.78 Yes 40 77.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190650305 + NM_000534 PMS1 0 . . . 4.13 73.73 37 6.55 Yes 11 0.27 No 0 0 No -36 0.73 Yes 47 71.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68652037 + NM_133509 RAD51B 0 . . . 1.88 0 30 6.8 Yes 66 -3.53 No 0 0 No -29 0.82 Yes 47 68.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108140805 + NM_000051 ATM 0 . . . 6.24 70.99 21 5.09 No 73 0.21 No 0 0 No -45 0.31 No 42 72.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215659380 - NM_000465 BARD1 0 . . . 0.91 0 29 5.54 No 59 0.79 Yes 0 0 No -28 0.65 No 48 82.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68822972 + NM_004360 CDH1 0 . . . 3.18 69.1 34 6.91 Yes 3 1.43 Yes 0 0 No -27 0.78 Yes 42 56.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68480246 + NM_133509 RAD51B 0 . . . 4.61 71.78 35 5.1 No 52 0.9 Yes 0 0 No -31 0.66 No 44 56.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68961792 + NM_133509 RAD51B 0 . . . 4.5 88.99 17 4.55 No 50 0.09 No 0 0 No -21 0.31 No 50 35.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190688433 + NM_000534 PMS1 0 . . . 6.9 83.14 22 5.74 Yes 5 0.55 No 0 0 No -21 0.55 No 37 34.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32939699 + NM_000059 BRCA2 0 . . . 3.77 85.02 29 5.74 Yes 66 0.72 No 0 0 No -28 0.71 Yes 49 69.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68776821 + NM_133509 RAD51B 0 . . . 6.1 80.39 25 6.65 Yes 13 0.99 Yes 0 0 No -33 0.38 No 41 73.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68777595 + NM_004360 CDH1 0 . . . 5.73 81.96 17 4.58 No 63 -1.77 No 0 0 No -16 0.73 Yes 34 72.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89682916 + NM_000314 PTEN 0 . . . 6.06 88.07 15 5.2 No 44 0.24 No 0 0 No -26 0.35 No 29 42.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108169307 + NM_000051 ATM 0 . . . 6.63 79.77 15 5.79 Yes 67 1.19 Yes 0 0 No -15 0.61 No 52 86.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37084044 + NM_000249 MLH1 0 . . . 2.48 76.54 32 6.08 Yes 38 -3.09 No 0 0 No -31 0.71 Yes 48 71.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68825245 + NM_133509 RAD51B 0 . . . 3.51 78.95 22 4.34 No 43 0.45 No 0 0 No -26 0.55 No 34 63.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94206040 - NM_005591 MRE11 0 . . . 0.32 75.42 48 8.13 Yes 49 -4.06 No 0 0 No -47 0.45 No 40 95.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215653385 - NM_000465 BARD1 0 . . . 3.38 67.6 17 6.92 Yes 35 1.09 Yes 0 0 No -27 0.63 No 35 58.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190663613 + NM_000534 PMS1 0 . . . 5.64 79.44 21 5.84 Yes -3 0.72 No 0 0 No -21 0.75 Yes 47 68.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190674018 + NM_000534 PMS1 0 . . . 2.41 67.56 12 4.98 No 52 -5.55 No 0 0 No -20 0.31 No 53 49.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131927032 + NM_005732 RAD50 0 . . . 4.39 71.28 22 4.5 No 58 -5.24 No 0 0 No -21 0.82 Yes 42 73.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1221905 + NM_000455 STK11 0 . . . 2.25 74.78 31 7.68 Yes 60 -5.05 No 27 0.96 Yes -30 0.84 Yes 51 34.35 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 68743862 + NM_133509 RAD51B 0 . . . 2.8 74.68 28 6.15 Yes 19 1.46 Yes 0 0 No -27 0.83 Yes 46 61.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68926920 + NM_133509 RAD51B 0 . . . 0.68 74.02 36 7 Yes 4 0.15 No 0 0 No -35 0.38 No 54 80.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68903111 + NM_133509 RAD51B 0 . . . 6.33 82.04 22 4.79 No 32 1.07 Yes 0 0 No -21 0.92 Yes 44 78.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47773871 + NM_000251 MSH2 0 . . . 8.07 76.61 14 5.74 Yes 17 0.7 No 0 0 No -13 0.36 No 37 39.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32894893 + NM_000059 BRCA2 0 . . . 2.86 65.96 21 5.2 No 24 -2.61 No 0 0 No -23 0.87 Yes 34 92.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68717400 + NM_133509 RAD51B 0 . . . 0.59 0 28 7.26 Yes -2 0.5 No 0 0 No -27 0.69 Yes 60 76.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75516773 - NM_001040108 MLH3 0 . . . 3.75 67.47 41 4.92 No 62 0.3 No 0 0 No -23 0.91 Yes 37 59.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69048363 + NM_133509 RAD51B 0 . . . 3.49 61.98 28 5.18 No 7 1.36 Yes 0 0 No -24 0.44 No 44 62.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90958899 - NM_002485 NBN 0 . . . 1.29 78.77 39 6.14 Yes 72 -5.15 No 0 0 No -31 0.61 No 47 55.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29104543 - NM_001005735 CHEK2 0 . . . 2.17 79.99 22 5.66 Yes 15 0.74 No 0 0 No -21 0.93 Yes 33 49.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68655638 + NM_133509 RAD51B 0 . . . 1.14 82.26 24 5.82 Yes 55 1.63 Yes 0 0 No -27 0.88 Yes 20 88.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56798974 + NM_058216 RAD51C 0 . . . 0.51 49.9 27 4.3 No 32 1.09 Yes 0 0 No -29 0.45 No 30 22.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94206216 - NM_005591 MRE11 0 . . . 4.78 79.21 17 3.66 No 2 1.81 Yes 0 0 No -17 0.54 No 32 76.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59817172 - NM_032043 BRIP1 0 . . . 10.5 95.76 20 4.9 No 36 0.53 No 0 0 No -19 0.52 No 39 94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33446528 - NM_002878 RAD51D 0 . . . 4.96 77.92 32 7.2 Yes 57 0.46 No 0 0 No -31 0.96 Yes 50 66.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41258720 - NM_007294 BRCA1 0 . . . 5.02 90.33 23 4.84 No 41 0.18 No 0 0 No -20 0.41 No 43 96.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69147882 + NM_133509 RAD51B 0 . . . 3.64 66.29 63 7.82 Yes 23 1.14 Yes 0 0 No -49 0.45 No 35 66.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69141450 + NM_133509 RAD51B 0 . . . 0.52 81.94 19 5.24 No 40 1.38 Yes 0 0 No -22 0.47 No 46 28.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68442073 + NM_133509 RAD51B 0 . . . 5.67 73.92 46 7.21 Yes 59 0.62 No 0 0 No -27 0.41 No 41 90.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68690209 + NM_133509 RAD51B 0 . . . 4.09 87.46 20 5.74 Yes -2 0.73 No 0 0 No -26 0.43 No 47 44.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48005857 + NM_000179 MSH6 0 . . . 2.54 75.61 15 5.56 Yes 39 -3.81 No 0 0 No -19 0.23 No 39 89.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29138695 - NM_001005735 CHEK2 0 . . . 0.16 0 35 4.21 No 12 1.79 Yes 0 0 No -29 0.92 Yes 46 76.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84388533 - NM_139076 FAM175A 0 . . . 6.65 79.7 12 4.37 No -1 1.68 Yes 0 0 No -55 0.47 No 46 51.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41240817 - NM_007294 BRCA1 0 . . . 3.41 71.62 21 4.69 No 27 -1.93 No 0 0 No -23 0.84 Yes 50 54.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29126883 - NM_001005735 CHEK2 0 . . . 5.62 76.67 25 5.39 No 47 -3.11 No 0 0 No -22 0.75 Yes 50 66.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190712001 + NM_000534 PMS1 0 . . . 4.35 81.93 33 6.2 Yes 53 1.23 Yes 0 0 No -32 0.89 Yes 39 73.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69081114 + NM_133509 RAD51B 0 . . . 4.35 72.16 34 6.32 Yes 16 0.26 No 0 0 No -33 0.77 Yes 42 72.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94199412 - NM_005591 MRE11 0 . . . 5.06 82.42 15 4.2 No 60 1.2 Yes 0 0 No -46 0.72 Yes 47 68.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68643399 + NM_133509 RAD51B 0 . . . 3.49 78.81 23 3.89 No 4 0.81 Yes 0 0 No -29 0.45 No 47 52.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52445340 - NM_004656 BAP1 0 . . . 10.01 90.82 32 7.65 Yes 6 2.15 Yes 0 0 No -31 0.61 No 52 88.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69088839 + NM_133509 RAD51B 0 . . . 5.37 82.45 9 3.21 No 33 2.29 Yes 0 0 No -23 0.83 Yes 43 64.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68538477 + NM_133509 RAD51B 0 . . . 3.22 69.32 20 5.09 No 32 0.92 Yes 0 0 No -22 0.72 Yes 26 84.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59823666 - NM_032043 BRIP1 0 . . . 8.45 81.78 21 5.74 Yes 10 1 Yes 0 0 No -34 0.67 Yes 39 57.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45796455 - NM_001048171 MUTYH 0 . . . 7.72 87.44 27 5.74 Yes 69 0.77 No 0 0 No -26 0.9 Yes 46 75.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59832893 - NM_032043 BRIP1 0 . . . 4.12 83.72 28 5.38 No 2 1.5 Yes 0 0 No -27 0.84 Yes 19 68.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69061266 + NM_133509 RAD51B 0 . . . 1.28 80.65 57 7.48 Yes 18 0.22 No 0 0 No -23 0.47 No 51 50.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68935026 + NM_133509 RAD51B 0 . . . 3.07 68.01 16 4.69 No 6 0.85 Yes 0 0 No -56 0.75 Yes 46 75.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108095932 + NM_000051 ATM 0 . . . 0.38 75.41 20 5.1 No 39 0.76 No 0 0 No -27 0.49 No 44 64.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33444410 - NM_002878 RAD51D 0 . . . 6.56 86.06 52 7.35 Yes 14 1.64 Yes 0 0 No -51 0.27 No 44 85.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131891826 + NM_005732 RAD50 0 . . . 2.54 0 12 5.09 No 23 0.56 No 0 0 No -25 0.27 No 46 64.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68503302 + NM_133509 RAD51B 0 . . . 7.47 79.83 36 5.88 Yes 10 1.26 Yes 0 0 No -25 0.6 No 48 92.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190720028 + NM_000534 PMS1 0 . . . 9.37 81.17 49 8.84 Yes 13 1.83 Yes 0 0 No -52 0.5 No 45 91.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21969274 - NM_000077 CDKN2A 0 . . . 0.46 0 27 5.08 No 2 0.86 Yes 0 0 No -21 0.51 No 38 42.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68495975 + NM_133509 RAD51B 0 . . . 1.35 67.37 23 5.21 No 62 0.28 No 0 0 No -22 0.48 No 37 89.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68903754 + NM_133509 RAD51B 0 . . . 5.89 72.78 30 5.83 Yes 50 0.97 Yes 0 0 No -29 0.82 Yes 23 94.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131955234 + NM_005732 RAD50 0 . . . 0.75 77.81 34 5.74 Yes 32 0.69 No 0 0 No -29 0.24 No 26 74.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56805803 + NM_058216 RAD51C 0 . . . 3.59 84.79 48 6.79 Yes 2 1.34 Yes 0 0 No -26 0.83 Yes 13 86.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69072272 + NM_133509 RAD51B 0 . . . 4.48 90.35 70 7.45 Yes 66 -3.46 No 0 0 No -26 0.63 No 47 50.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47795004 + NM_000251 MSH2 0 . . . 1.46 67.93 20 4.9 No 16 -1.45 No 0 0 No -25 0.63 No 46 64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59847350 - NM_032043 BRIP1 0 . . . 5.04 69.4 24 5.48 No 36 0.51 No 0 0 No -21 0.35 No 32 74.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75509153 - NM_001040108 MLH3 0 . . . 2.83 75.97 29 5.9 Yes 47 0.09 No 0 0 No -22 0.68 Yes 48 62.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190740880 + NM_000534 PMS1 0 . . . 4.07 72.75 50 5.16 No 48 0.43 No 0 0 No -31 0.67 Yes 45 63.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215603890 - NM_000465 BARD1 0 . . . 1.51 78.41 35 6 Yes 36 0.72 No 0 0 No -26 0.69 Yes 49 68.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41019531 + NM_001164269 RAD51 0 . . . 1.41 0 19 4.89 No 45 0.53 No 0 0 No -23 0.48 No 25 77.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68843499 + NM_133509 RAD51B 0 . . . 2.72 77.99 36 5.78 Yes 33 -2.41 No 0 0 No -21 0.52 No 47 82.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68804144 + NM_133509 RAD51B 0 . . . 2.31 62.33 36 6.08 Yes 14 0.86 Yes 0 0 No -35 0.5 No 44 80.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94150789 - NM_005591 MRE11 0 . . . 0.86 62.4 12 4.65 No 68 1.39 Yes 0 0 No -21 0.54 No 38 71.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108131184 + NM_000051 ATM 0 . . . 4.72 69.06 41 4.89 No 56 -1.66 No 0 0 No -23 0.9 Yes 31 87.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47702530 + NM_000251 MSH2 0 . . . 3.56 71.96 21 5.48 No 75 2.05 Yes 0 0 No -32 0.5 No 63 33.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29102087 - NM_001005735 CHEK2 0 . . . 0.88 74.73 28 5.55 No 42 0.67 No 0 0 No -23 0.67 Yes 16 94.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68939924 + NM_133509 RAD51B 0 . . . 2.52 68.67 18 5.06 No 67 0.98 Yes 0 0 No -28 0.37 No 39 69.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90986458 - NM_002485 NBN 0 . . . 0.48 64.29 14 4.47 No 58 0.06 No 0 0 No -27 0.51 No 53 64.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68343425 + NM_133509 RAD51B 0 . . . 1.23 61.64 26 5.17 No 42 1.98 Yes 0 0 No -25 0.64 No 39 78.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68709242 + NM_133509 RAD51B 0 . . . 4.18 79.85 28 5.38 No 17 1.2 Yes 0 0 No -27 0.78 Yes 41 88.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68423918 + NM_133509 RAD51B 0 . . . 6.14 84.82 30 5.47 No 75 -4.32 No 0 0 No -23 0.78 Yes 49 70.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59816684 - NM_032043 BRIP1 0 . . . 4.35 80.64 22 6.86 Yes 48 0.53 No 0 0 No -21 0.75 Yes 43 41.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89624838 + NM_000314 PTEN 0 . . . 4.23 71.41 15 6.05 Yes 55 0.94 Yes 0 0 No -34 0.6 No 47 36.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89698449 + NM_000314 PTEN 0 . . . 1.47 59.15 24 5.48 No -3 0.57 No 0 0 No -23 0.73 Yes 50 48.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59850493 - NM_032043 BRIP1 0 . . . 3.3 73.5 43 6.79 Yes 74 0.56 No 0 0 No -35 0.63 No 40 70.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47718490 + NM_000251 MSH2 0 . . . 2.89 68.34 20 5.55 No 21 1.71 Yes 0 0 No -27 0.75 Yes 37 80.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68858987 + NM_133509 RAD51B 0 . . . 3.2 70.65 27 2.99 No 2 0.41 No 0 0 No -26 0.44 No 51 62.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215673449 - NM_000465 BARD1 0 . . . 5.19 73.77 56 8.87 Yes 59 1.24 Yes 0 0 No -26 0.89 Yes 48 90.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56777987 + NM_058216 RAD51C 0 . . . 3.11 80.12 20 4.69 No 6 1.73 Yes 0 0 No -19 0.3 No 52 73.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215649282 - NM_000465 BARD1 0 . . . 6.06 77.37 21 3.25 No 72 -1.53 No 0 0 No -20 0.62 No 46 50.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59862901 - NM_032043 BRIP1 0 . . . 7.34 86.03 19 5 No 26 1.25 Yes 0 0 No -23 0.78 Yes 43 65.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21967896 - NM_000077 CDKN2A 0 . . . 0.75 0 66 6.67 Yes 16 0.53 No 0 0 No -21 0.46 No 42 74.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41217850 - NM_007294 BRCA1 0 . . . 4.77 78.83 69 5.35 No 27 0.16 No 0 0 No -31 0.69 Yes 47 38.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68953063 + NM_133509 RAD51B 0 . . . 8.43 77.45 22 5.13 No 68 0.26 No 0 0 No -26 0.53 No 49 74.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68394714 + NM_133509 RAD51B 0 . . . 7 83.34 26 5.17 No 66 0.32 No 0 0 No -25 0.54 No 46 75.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59800450 - NM_032043 BRIP1 0 . . . 8.05 77.68 44 7.04 Yes 14 1.64 Yes 0 0 No -23 0.8 Yes 44 97.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90989309 - NM_002485 NBN 0 . . . 4.81 74.98 40 6.13 Yes 69 -4.65 No 0 0 No -34 0.47 No 38 83.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56781370 + NM_058216 RAD51C 0 . . . 1.4 83.16 41 6.54 Yes 67 1.15 Yes 0 0 No -25 0.45 No 51 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69046264 + NM_133509 RAD51B 0 . . . 3.43 75.65 42 5.04 No 2 0.35 No 0 0 No -29 0.76 Yes 43 52.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68777533 + NM_133509 RAD51B 0 . . . 1.79 69.25 39 6.16 Yes 58 -3.88 No 0 0 No -35 0.45 No 53 48.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32951337 + NM_000059 BRCA2 0 . . . 5.04 78.69 15 4.58 No 62 0.89 Yes 0 0 No -32 0.68 Yes 42 54.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131960986 + NM_005732 RAD50 0 . . . 6.03 78.78 18 5.97 Yes 30 1.2 Yes 0 0 No -30 0.39 No 28 60.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152360966 - NM_005431 XRCC2 0 . . . 4.31 66.99 15 5.04 No 74 1.94 Yes 0 0 No -26 0.75 Yes 44 44.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68903200 + NM_133509 RAD51B 0 . . . 8 87.2 24 6.39 Yes 17 1.24 Yes 0 0 No -23 0.92 Yes 41 72.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37076370 + NM_000249 MLH1 0 . . . 3.17 57.17 43 5.69 Yes 50 0.69 No 0 0 No -23 0.4 No 45 87.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89719154 + NM_000314 PTEN 0 . . . 2.55 78.05 41 6.43 Yes 68 1.25 Yes 0 0 No -37 0.33 No 40 77.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32916749 + NM_000059 BRCA2 0 . . . 3.65 74.64 25 6.12 Yes 55 -4.52 No 0 0 No -24 0.85 Yes 52 56.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68987090 + NM_133509 RAD51B 0 . . . 0.7 71.25 23 4.69 No 61 -4.51 No 0 0 No -25 0.31 No 50 39.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59928425 - NM_032043 BRIP1 0 . . . 3.6 85.02 29 5.24 No 4 1.05 Yes 0 0 No -28 0.7 Yes 54 74.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94163298 - NM_005591 MRE11 0 . . . 0.97 0 18 4.57 No 75 -4.14 No 0 0 No -17 0.79 Yes 61 66.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21977063 - NM_000077 CDKN2A 0 . . . 2.63 67.5 15 5.18 No 48 0.12 No 0 0 No -26 0.49 No 37 80.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59758916 - NM_032043 BRIP1 0 . . . 7.38 83.1 25 4.9 No 52 0.46 No 0 0 No -23 0.46 No 40 66.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90944972 - NM_002485 NBN 0 . . . 3.79 67.67 17 4.58 No 18 1.15 Yes 0 0 No -16 0.5 No 40 58.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37070713 + NM_000249 MLH1 0 . . . 6.41 80.97 20 7.14 Yes 64 0.68 No 0 0 No -19 0.43 No 42 57.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47715929 + NM_000251 MSH2 0 . . . 0.48 73.06 27 5.51 No 68 -5.94 No 0 0 No -26 0.88 Yes 48 42.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68828417 + NM_133509 RAD51B 0 . . . 2.96 0 18 5.24 No 42 1.75 Yes 0 0 No -21 0.74 Yes 36 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215649247 - NM_000465 BARD1 0 . . . 1.5 67.39 21 4.74 No 27 -3.53 No 0 0 No -20 0.96 Yes 46 69.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59909488 - NM_032043 BRIP1 0 . . . 2.3 0 13 5.36 No 23 1.89 Yes 0 0 No -20 0.51 No 35 93.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90994591 - NM_002485 NBN 0 . . . 4.8 86.08 75 8.41 Yes 7 1.35 Yes 0 0 No -32 0.44 No 50 53.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68645136 + NM_133509 RAD51B 0 . . . 6.3 86.48 29 7.35 Yes 16 0.73 No 0 0 No -28 0.92 Yes 22 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215656754 - NM_000465 BARD1 0 . . . 3.31 77.17 36 5.89 Yes 54 0.62 No 0 0 No -25 0.6 No 46 93.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90956435 - NM_002485 NBN 0 . . . 5.92 68.95 17 4.54 No 23 0.82 Yes 0 0 No -16 0.39 No 35 92.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68453726 + NM_133509 RAD51B 0 . . . 6.97 85.36 25 6.19 Yes 37 1.56 Yes 0 0 No -32 0.48 No 52 29.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68411106 + NM_133509 RAD51B 0 . . . 9.77 84.96 27 5.52 No 65 -2.12 No 0 0 No -27 0.48 No 44 91.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105178558 + NM_021930 RINT1 0 . . . 1.41 84.22 18 5.74 Yes 76 1.93 Yes 0 0 No -26 0.75 Yes 50 70.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90985085 - NM_002485 NBN 0 . . . 2 75.48 25 6.4 Yes 0 1 Yes 0 0 No -24 0.95 Yes 58 38.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68415914 + NM_133509 RAD51B 0 . . . 5.24 77.09 26 5.1 No 7 1.39 Yes 0 0 No -25 0.96 Yes 42 43.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59938790 - NM_032043 BRIP1 0 . . . 1.68 84.45 26 5.1 No 3 0.3 No 0 0 No -32 0.56 No 47 41.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68437076 + NM_133509 RAD51B 0 . . . 3.56 77.88 25 4.78 No 71 -2.09 No 0 0 No -24 0.92 Yes 15 58.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89668555 + NM_000314 PTEN 0 . . . 3.62 79.15 24 6 Yes 33 0.94 Yes 0 0 No -23 0.61 No 44 59.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108116572 + NM_000051 ATM 0 . . . 2.3 84.41 13 4.91 No 36 0.2 No 0 0 No -18 0.44 No 40 89.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68596902 + NM_133509 RAD51B 0 . . . 5.58 76.49 23 3.96 No 35 0.76 No 0 0 No -22 0.63 No 44 71.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105193043 + NM_021930 RINT1 0 . . . 3.28 66.4 27 5.2 No 31 1.44 Yes 0 0 No -24 0.65 No 27 86.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90953239 - NM_002485 NBN 0 . . . 8.34 92.7 29 5.08 No 71 0.9 Yes 0 0 No -28 0.55 No 45 83.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94156799 - NM_005591 MRE11 0 . . . 8.2 84.33 27 5.29 No 54 -2.07 No 0 0 No -27 0.62 No 40 56.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29113176 - NM_001005735 CHEK2 0 . . . 1.95 76.92 27 5.16 No 30 1.05 Yes 0 0 No -26 0.51 No 44 76.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68857068 + NM_004360 CDH1 0 . . . 1.15 0 22 5.2 No 10 1.28 Yes 0 0 No -21 0.46 No 48 46.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47794153 + NM_000251 MSH2 0 . . . 5.91 86.59 17 4.71 No 72 -3.64 No 0 0 No -19 0.44 No 37 47.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538720 + NM_133509 RAD51B 0 . . . 6.77 93.21 27 3.68 No 46 0.38 No 0 0 No -24 0.65 No 44 79.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68389291 + NM_133509 RAD51B 0 . . . 9.95 75.94 34 6.32 Yes 16 0.37 No 0 0 No -31 0.61 No 41 90.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108167399 + NM_000051 ATM 0 . . . 3.75 63.66 19 4.9 No 74 0.56 No 0 0 No -23 0.75 Yes 40 69.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108137146 + NM_000051 ATM 0 . . . 9.03 83.03 32 6.48 Yes -4 0.73 No 0 0 No -31 0.59 No 46 47.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68812923 + NM_004360 CDH1 0 . . . 3.62 0 17 5.01 No 54 0.25 No 0 0 No -24 0.85 Yes 52 51.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41214746 - NM_007294 BRCA1 0 . . . 0.59 0 17 5.38 No 52 0.65 No 0 0 No -22 0.59 No 41 85.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68647506 + NM_133509 RAD51B 0 . . . 0.81 0 154 13.33 Yes 28 -3.45 No 0 0 No -56 0.27 No 56 41.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47688804 + NM_000251 MSH2 0 . . . 2.09 85.81 28 5.83 Yes 9 0.98 Yes 0 0 No -27 0.75 Yes 49 95.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68345742 + NM_133509 RAD51B 0 . . . 1.1 67.06 27 5.68 Yes 71 1.58 Yes 0 0 No -26 0.85 Yes 41 74.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84401276 - NM_139076 FAM175A 0 . . . 2.58 68.34 23 5.04 No 5 1.75 Yes 0 0 No -22 0.72 Yes 40 73.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47634037 + NM_000251 MSH2 0 . . . 0.84 68.99 23 5.62 Yes 63 -4.96 No 0 0 No -22 0.63 No 47 87.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68406343 + NM_133509 RAD51B 0 . . . 0.74 62.79 18 5.39 No 39 0.41 No 0 0 No -22 0.65 No 55 57.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108137733 + NM_000051 ATM 0 . . . 0.42 74.73 41 5.6 Yes 33 0.98 Yes 0 0 No -40 0.65 No 20 25.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59768726 - NM_032043 BRIP1 0 . . . 8.69 88.46 27 5.29 No 37 0.59 No 0 0 No -23 0.29 No 43 91.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68703012 + NM_133509 RAD51B 0 . . . 3.54 82.8 23 5.73 Yes 65 -6.36 No 0 0 No -26 0.55 No 50 77.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190672187 + NM_000534 PMS1 0 . . . 1.07 0 18 5.94 Yes 15 2.22 Yes 0 0 No -29 0.9 Yes 55 38.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89719553 + NM_000314 PTEN 0 . . . 7.13 75.5 22 5.1 No 33 0.9 Yes 0 0 No -22 0.81 Yes 30 88.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108221314 + NM_000051 ATM 0 . . . 0.39 0 28 5.2 No 66 -5.99 No 0 0 No -27 0.76 Yes 33 95.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41247994 - NM_007294 BRCA1 0 . . . 5.07 77.29 25 4.41 No 56 0.84 Yes 0 0 No -24 0.44 No 43 78.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47806528 + NM_000251 MSH2 0 . . . 4.88 74.31 29 5.23 No 53 0.56 No 0 0 No -28 0.62 No 55 58.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90946355 - NM_002485 NBN 0 . . . 7.76 86.2 36 5.7 Yes 72 -4.19 No 0 0 No -25 0.65 No 47 50.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69051333 + NM_133509 RAD51B 0 . . . 2.96 74.59 31 6.06 Yes 46 1.52 Yes 0 0 No -30 0.8 Yes 44 55.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94177747 - NM_005591 MRE11 0 . . . 4.71 74.15 32 5.22 No 1 0.64 No 0 0 No -27 0.7 Yes 39 67.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84397993 - NM_139076 FAM175A 0 . . . 3.68 75.92 22 4.9 No 29 0.81 Yes 0 0 No -21 0.86 Yes 37 95.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68717909 + NM_133509 RAD51B 0 . . . 6.64 80.62 25 3.74 No 65 0.88 Yes 0 0 No -24 0.85 Yes 45 88.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29105965 - NM_001005735 CHEK2 0 . . . 3.93 67.77 21 2.84 No 0 0.85 Yes 0 0 No -26 0.74 Yes 39 59.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68708980 + NM_133509 RAD51B 0 . . . 6.65 74.07 20 4.51 No 37 0.93 Yes 0 0 No -24 0.79 Yes 46 58.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69030601 + NM_133509 RAD51B 0 . . . 2.03 84.81 22 4.9 No 66 0.42 No 0 0 No -21 0.92 Yes 53 57.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190734061 + NM_000534 PMS1 0 . . . 2.72 84.49 21 5.72 Yes 30 1.67 Yes 0 0 No -25 0.64 No 28 97.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68567863 + NM_133509 RAD51B 0 . . . 1.2 66.87 30 5.86 Yes 0 0.54 No 0 0 No -22 0.48 No 47 48.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6025827 - NM_000535 PMS2 0 . . . 5.12 72.88 63 8.17 Yes 12 0.45 No 0 0 No -45 0.53 No 46 83.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68599180 + NM_133509 RAD51B 0 . . . 0.3 65.49 29 5.55 No -4 0.68 No 0 0 No -21 0.31 No 62 53.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89671356 + NM_000314 PTEN 0 . . . 5.73 76.55 24 5.3 No 16 1.5 Yes 0 0 No -23 0.39 No 42 92.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68864562 + NM_004360 CDH1 0 . . . 0.47 0 9 3.87 No 76 -3.35 No 0 0 No -41 0.9 Yes 30 70.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37077192 + NM_000249 MLH1 0 . . . 1.71 67.42 22 5.53 No -1 0.71 No 0 0 No -21 0.75 Yes 55 59.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131922207 + NM_005732 RAD50 0 . . . 0.11 60.73 33 5.82 Yes 62 0.59 No 0 0 No -20 0.35 No 32 81.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84394967 - NM_139076 FAM175A 0 . . . 5.96 67.92 16 4.64 No 21 0.55 No 0 0 No -26 0.41 No 43 93.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215589704 - NM_000465 BARD1 0 . . . 8.59 85.25 19 5.74 Yes 75 1.53 Yes 0 0 No -29 0.54 No 45 55.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69047720 + NM_133509 RAD51B 0 . . . 0.63 80.26 22 5.29 No 45 0.76 No 0 0 No -40 0.72 Yes 49 65.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220059 - NM_007294 BRCA1 0 . . . 2.75 80.37 31 4.18 No 11 1.64 Yes 0 0 No -30 0.71 Yes 47 86.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108223849 + NM_000051 ATM 0 . . . 0.71 67.33 20 4.49 No 20 0.51 No 0 0 No -23 0.9 Yes 38 72.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41197506 - NM_007294 BRCA1 0 . . . 1.7 81.02 37 6.24 Yes 61 0.68 No 0 0 No -36 0.84 Yes 51 72.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69060591 + NM_133509 RAD51B 0 . . . 3.27 80.86 19 4.01 No 52 0.51 No 0 0 No -27 0.7 Yes 52 65.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94167600 - NM_005591 MRE11 0 . . . 3.38 69.34 49 7.93 Yes 59 0.85 Yes 0 0 No -51 0.55 No 47 57.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89649891 + NM_000314 PTEN 0 . . . 5.66 77.05 14 4.24 No 14 0.32 No 0 0 No -13 0.65 No 44 61.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108172608 + NM_000051 ATM 0 . . . 2.71 64.33 17 5.78 Yes 37 0.64 No 0 0 No -58 0.39 No 48 63.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59918444 - NM_032043 BRIP1 0 . . . 5.3 73.81 22 7.16 Yes 46 1.21 Yes 0 0 No -21 0.93 Yes 46 94.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68826115 + NM_133509 RAD51B 0 . . . 1.86 82.86 29 7.48 Yes 45 0.4 No 0 0 No -28 0.91 Yes 46 72.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68438452 + NM_133509 RAD51B 0 . . . 6.09 88.99 20 5.1 No 30 1.31 Yes 0 0 No -19 0.62 No 53 55.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105208018 + NM_021930 RINT1 0 . . . 0.43 75.89 34 7.15 Yes 4 0.64 No 0 0 No -33 0.85 Yes 47 39.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59874871 - NM_032043 BRIP1 0 . . . 3.8 74.99 21 5.56 Yes 33 1.68 Yes 0 0 No -20 0.57 No 38 83.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47791561 + NM_000251 MSH2 0 . . . 3.83 63.43 20 4.89 No 10 0.45 No 0 0 No -20 0.83 Yes 48 71.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94187660 - NM_005591 MRE11 0 . . . 2.51 76.58 20 5.52 No -4 0.23 No 0 0 No -19 0.57 No 34 27.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59778994 - NM_032043 BRIP1 0 . . . 2.17 69.24 34 6.31 Yes 8 0.16 No 0 0 No -26 0.69 Yes 50 75.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68860729 + NM_004360 CDH1 0 . . . 9.27 84.13 16 4.69 No 62 1.22 Yes 0 0 No -23 0.53 No 50 93.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108101449 + NM_000051 ATM 0 . . . 6.22 99.43 24 4.78 No 4 0.8 Yes 0 0 No -23 0.79 Yes 54 30.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21976989 - NM_000077 CDKN2A 0 . . . 4.33 77.88 28 5.66 Yes 74 -6.97 No 0 0 No -27 0.92 Yes 39 44.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23639625 - NM_024675 PALB2 0 . . . 5.62 84.88 76 8.65 Yes 13 0.89 Yes 0 0 No -24 0.79 Yes 45 80.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23627955 - NM_024675 PALB2 0 . . . 0.66 71.77 23 3.93 No 63 1 Yes 0 0 No -22 0.65 No 49 75.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69104006 + NM_133509 RAD51B 0 . . . 3.63 84.95 20 4.9 No 33 1.16 Yes 0 0 No -44 0.77 Yes 25 44.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40996962 + NM_001164269 RAD51 0 . . . 6.1 81.85 25 4.43 No 9 0.98 Yes 0 0 No -20 0.48 No 49 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45794466 - NM_001048171 MUTYH 0 . . . 0.66 70.84 31 5.83 Yes 56 1.48 Yes 0 0 No -30 0.94 Yes 41 80.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56775093 + NM_058216 RAD51C 0 . . . 0.28 84.41 19 4.32 No 16 0.67 No 0 0 No -28 0.79 Yes 42 90.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68813072 + NM_004360 CDH1 0 . . . 4.04 76.64 15 4.58 No 72 -3.49 No 0 0 No -22 0.87 Yes 50 52.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59881696 - NM_032043 BRIP1 0 . . . 6.21 88.2 28 6.29 Yes 29 0.67 No 0 0 No -22 0.67 Yes 38 62.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89679026 + NM_000314 PTEN 0 . . . 5.29 82.54 36 6.24 Yes 56 -2.03 No 0 0 No -35 0.74 Yes 51 66.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48026917 + NM_000179 MSH6 0 . . . 1.32 75.47 29 6.63 Yes 57 0.4 No 0 0 No -29 0.51 No 59 42.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131939417 + NM_005732 RAD50 0 . . . 1.04 0 22 4.8 No 50 0.42 No 0 0 No -18 0.55 No 37 86.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68891147 + NM_133509 RAD51B 0 . . . 2.2 65.4 15 3.64 No -1 -2.05 No 0 0 No -57 0.59 No 45 34.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190741577 + NM_000534 PMS1 0 . . . 0.85 71.28 41 7.54 Yes 31 1.42 Yes 0 0 No -40 0.79 Yes 51 36.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56804367 + NM_058216 RAD51C 0 . . . 3.25 80.12 31 5.82 Yes 75 1.16 Yes 0 0 No -30 0.8 Yes 50 86.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68779339 + NM_004360 CDH1 0 . . . 1.58 79.84 26 6.08 Yes 47 -4.69 No 0 0 No -25 0.82 Yes 61 34.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68400641 + NM_133509 RAD51B 0 . . . 5.85 85.83 33 5.67 Yes 22 0.8 Yes 0 0 No -32 0.65 No 36 63.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47745361 + NM_000251 MSH2 0 . . . 3.91 73.05 27 6.16 Yes 36 1.48 Yes 0 0 No -26 0.64 No 48 68.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84382690 - NM_139076 FAM175A 0 . . . 3.59 75.87 20 5.74 Yes 2 0.93 Yes 0 0 No -19 0.58 No 41 62.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68801743 + NM_133509 RAD51B 0 . . . 2.19 70.25 22 5.52 No 56 -5.5 No 0 0 No -21 0.74 Yes 44 51.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41012001 + NM_001164269 RAD51 0 . . . 0.94 76.63 14 4 No 58 -3.88 No 0 0 No -23 0.48 No 43 60.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59906570 - NM_032043 BRIP1 0 . . . 8.89 81.01 28 5.35 No 6 1.44 Yes 0 0 No -27 0.69 Yes 37 86.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59876892 - NM_032043 BRIP1 0 . . . 8.55 76.33 22 5.61 Yes 12 1.78 Yes 0 0 No -30 0.81 Yes 42 68.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69028341 + NM_133509 RAD51B 0 . . . 8.67 83.65 21 5.66 Yes 64 -5.2 No 0 0 No -20 0.54 No 47 73.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68303366 + NM_133509 RAD51B 0 . . . 6.15 80.12 23 6.08 Yes 8 1.24 Yes 0 0 No -22 0.64 No 50 91.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32907763 + NM_000059 BRCA2 0 . . . 2.13 0 18 4.46 No 69 -3.54 No 0 0 No -22 0.54 No 52 72.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131903863 + NM_005732 RAD50 0 . . . 2.27 0 17 4.36 No 58 1.51 Yes 0 0 No -16 0.78 Yes 43 92.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59797847 - NM_032043 BRIP1 0 . . . 5.2 77.35 15 4.76 No 34 0.22 No 0 0 No -48 0.52 No 44 88.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215649319 - NM_000465 BARD1 0 . . . 5.98 72.14 35 6.86 Yes 35 -1.52 No 0 0 No -28 0.73 Yes 48 66.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68470164 + NM_133509 RAD51B 0 . . . 0.67 0 48 5.86 Yes 47 0.9 Yes 0 0 No -48 0.75 Yes 45 78.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32948709 + NM_000059 BRCA2 0 . . . 1.8 0 14 4.9 No 32 1.28 Yes 0 0 No -45 0.43 No 39 56.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190686377 + NM_000534 PMS1 0 . . . 1.42 69.46 21 5.03 No 9 0.66 No 0 0 No -45 0.46 No 41 44.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68794842 + NM_133509 RAD51B 0 . . . 3.87 73.81 40 5.83 Yes 39 0.14 No 0 0 No -26 0.71 Yes 44 71.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6025231 - NM_000535 PMS2 0 . . . 1.72 80.22 19 5.31 No 58 -3.88 No 0 0 No -25 0.66 No 43 78.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68906431 + NM_133509 RAD51B 0 . . . 0.32 77.91 25 9.9 Yes 50 -2.8 No 0 0 No -24 0.74 Yes 46 39.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215597006 - NM_000465 BARD1 0 . . . 4.18 75.01 18 3.51 No 3 0.22 No 0 0 No -17 0.64 No 49 66.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68804082 + NM_004360 CDH1 0 . . . 0.28 61.29 36 8.37 Yes 42 0.34 No 0 0 No -22 0.42 No 43 32.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68821113 + NM_133509 RAD51B 0 . . . 0.58 78.2 25 5.1 No 2 0.97 Yes 0 0 No -24 0.78 Yes 56 46.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68913822 + NM_133509 RAD51B 0 . . . 2.24 77.35 20 5 No 50 1.23 Yes 0 0 No -18 0.31 No 52 61.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69118280 + NM_133509 RAD51B 0 . . . 3.65 79.11 22 5 No 8 0.58 No 0 0 No -21 0.69 Yes 50 56.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68610846 + NM_133509 RAD51B 0 . . . 0.78 0 11 4.12 No 20 0.76 No 0 0 No -26 0.62 No 38 72.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59928076 - NM_032043 BRIP1 0 . . . 1.26 62.62 31 5.74 Yes 9 1.39 Yes 0 0 No -30 0.59 No 49 82.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69036247 + NM_133509 RAD51B 0 . . . 0.04 66.37 31 5.34 No 34 0.18 No 0 0 No -30 0.5 No 51 72.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68535450 + NM_133509 RAD51B 0 . . . 5 80.94 30 5.57 Yes 8 1.47 Yes 0 0 No -29 0.73 Yes 50 71.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190710389 + NM_000534 PMS1 0 . . . 6.25 88.48 32 5.62 Yes 10 0.64 No 0 0 No -31 0.96 Yes 48 97.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68574245 + NM_133509 RAD51B 0 . . . 1.09 72.24 26 5 No 75 -4.85 No 0 0 No -25 0.7 Yes 45 61.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68931299 + NM_133509 RAD51B 0 . . . 0.22 76.22 22 7.21 Yes 35 -2.11 No 0 0 No -21 0.95 Yes 42 50.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7565171 - NM_000546 TP53 0 . . . 1.32 81.5 19 5.66 Yes 11 0.11 No 0 0 No -25 0.72 Yes 47 30.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48032629 + NM_000179 MSH6 0 . . . 3.36 61.3 37 7.28 Yes 72 1.56 Yes 0 0 No -36 0.7 Yes 40 55.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52443379 - NM_004656 BAP1 0 . . . 6.76 69.45 22 4.9 No 18 1.51 Yes 0 0 No -21 0.48 No 40 82.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29138254 - NM_001005735 CHEK2 0 . . . 1.67 66.12 33 6.61 Yes 45 -3.64 No 0 0 No -33 0.51 No 49 80.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68811489 + NM_004360 CDH1 0 . . . 1.48 74.39 53 8.01 Yes 48 1.66 Yes 0 0 No -35 0.38 No 10 82.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94185280 - NM_005591 MRE11 0 . . . 9.38 83.84 26 4.89 No 58 1.46 Yes 0 0 No -31 0.36 No 43 90.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190649069 + NM_000534 PMS1 0 . . . 3.83 77.33 10 3.87 No 65 1.37 Yes 0 0 No -30 0.67 Yes 46 34.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69039616 + NM_133509 RAD51B 0 . . . 4.77 64.73 33 5.65 Yes 12 1.1 Yes 0 0 No -25 0.55 No 46 85.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131932337 + NM_005732 RAD50 0 . . . 3 0 21 4.25 No 41 -3.78 No 0 0 No -25 0.78 Yes 47 63.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68550272 + NM_133509 RAD51B 0 . . . 5.77 79.85 19 5 No 24 1.23 Yes 0 0 No -22 0.41 No 48 95.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131959436 + NM_005732 RAD50 0 . . . 2.43 72.82 21 5.74 Yes 42 0.03 No 0 0 No -20 0.87 Yes 16 94.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21972339 - NM_000077 CDKN2A 0 . . . 1.48 77.74 15 4.15 No 45 -3.73 No 0 0 No -18 0.83 Yes 45 68.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69005735 + NM_133509 RAD51B 0 . . . 3.6 74.25 21 3.79 No 28 0.91 Yes 0 0 No -20 0.97 Yes 30 93.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29088524 - NM_001005735 CHEK2 0 . . . 3.68 77.74 30 6 Yes NA NA NA 0 0 No -29 0.54 No 30 68.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68784871 + NM_004360 CDH1 0 . . . 2.95 70.85 32 5.61 Yes 18 0.4 No 0 0 No -31 0.8 Yes 40 92.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69091696 + NM_133509 RAD51B 0 . . . 2.58 73.13 49 7.4 Yes 27 0.19 No 0 0 No -29 0.74 Yes 49 32.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68324206 + NM_133509 RAD51B 0 . . . 0.88 0 19 5.55 No 27 1.05 Yes 0 0 No -24 0.72 Yes 38 75.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59763882 - NM_032043 BRIP1 0 . . . 4.07 75.49 54 6.95 Yes 58 0.03 No 0 0 No -36 0.55 No 44 53.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41245669 - NM_007294 BRCA1 0 . . . 0.52 64.67 35 6.4 Yes 74 -3.42 No 0 0 No -34 0.76 Yes 30 26.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47804370 + NM_000251 MSH2 0 . . . 10.17 81.08 35 4.95 No 45 0.52 No 0 0 No -25 0.8 Yes 39 55.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68820528 + NM_133509 RAD51B 0 . . . 1.24 72.97 24 6.12 Yes 11 0.4 No 0 0 No -23 0.9 Yes 47 78.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41248230 - NM_007294 BRCA1 0 . . . 3.6 85.02 25 4.53 No 4 1.2 Yes 0 0 No -27 0.65 No 54 52.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131909583 + NM_005732 RAD50 0 . . . 9.47 87.65 30 4.76 No 8 1.32 Yes 0 0 No -29 0.47 No 40 63.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68819939 + NM_133509 RAD51B 0 . . . 0.15 59.32 30 5.6 Yes 67 0.31 No 0 0 No -29 0.8 Yes 35 42.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47748805 + NM_000251 MSH2 0 . . . 5.47 78.18 27 5.38 No NA NA NA 0 0 No -27 0.81 Yes 47 40.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59905879 - NM_032043 BRIP1 0 . . . 7.57 77.77 24 5.97 Yes 51 1.22 Yes 0 0 No -23 0.61 No 39 65.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41000400 + NM_001164269 RAD51 0 . . . 2.24 80.12 59 7.9 Yes 7 1.02 Yes 0 0 No -25 0.78 Yes 51 84.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59891691 - NM_032043 BRIP1 0 . . . 0.65 82.91 32 5.8 Yes 29 1.46 Yes 0 0 No -31 0.63 No 49 51.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59829422 - NM_032043 BRIP1 0 . . . 2.62 84.19 21 5.23 No 53 0.48 No 0 0 No -28 0.55 No 47 94.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29119281 - NM_001005735 CHEK2 0 . . . 6 92.92 12 4.69 No 73 0.9 Yes 0 0 No -19 0.46 No 47 74.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47674110 + NM_000251 MSH2 0 . . . 3.27 68.06 38 8.29 Yes 12 0.86 Yes 0 0 No -24 0.65 No 41 78.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152342202 - NM_005431 XRCC2 0 . . . 9.29 83.32 26 5.25 No 5 1.5 Yes 0 0 No -25 0.64 No 53 43.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68563465 + NM_133509 RAD51B 0 . . . 7 85.52 27 5.26 No 55 0.76 No 0 0 No -26 0.59 No 32 51.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131923125 + NM_005732 RAD50 0 . . . 3.27 77.98 23 7.68 Yes 18 1.37 Yes 0 0 No -22 0.78 Yes 40 45.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190701970 + NM_000534 PMS1 0 . . . 2.78 78.36 26 6.29 Yes 5 0.65 No 0 0 No -25 0.28 No 47 58.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108169265 + NM_000051 ATM 0 . . . 4.27 81.08 31 6.18 Yes 25 1.21 Yes 0 0 No -31 0.4 No 47 64.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68471563 + NM_133509 RAD51B 0 . . . 5.52 74.53 22 4.43 No 55 1.46 Yes 0 0 No -27 0.45 No 36 63.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29116653 - NM_001005735 CHEK2 0 . . . 2.01 72.11 45 5.91 Yes 39 0.23 No 0 0 No -33 0.59 No 49 46.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23652196 - NM_024675 PALB2 0 . . . 2.16 65.19 73 9.24 Yes 52 0.18 No 27 0.78 Yes -24 0.74 Yes 45 58.21 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 190654819 + NM_000534 PMS1 0 . . . 1.75 81.47 41 5.64 Yes 41 -3.52 No 0 0 No -29 0.57 No 47 77.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131956749 + NM_005732 RAD50 0 . . . 3.71 71.04 32 7.34 Yes 3 0.06 No 0 0 No -31 0.68 Yes 48 65.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69103417 + NM_133509 RAD51B 0 . . . 6.81 81.75 20 4.57 No -1 0.95 Yes 0 0 No -19 0.91 Yes 48 70.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68735576 + NM_133509 RAD51B 0 . . . 2.78 70.57 28 5.48 No 19 0.82 Yes 0 0 No -54 0.62 No 43 63.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108216022 + NM_000051 ATM 0 . . . 1.32 0 23 6.32 Yes 1 1.06 Yes 0 0 No -22 0.85 Yes 48 44.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152349923 - NM_005431 XRCC2 0 . . . 7.6 86.73 23 4.7 No 34 1.34 Yes 0 0 No -22 0.67 Yes 44 74.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59932795 - NM_032043 BRIP1 0 . . . 1.55 68.06 13 5.53 No 12 0.42 No 0 0 No -24 0.47 No 46 74.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68328923 + NM_133509 RAD51B 0 . . . 4.9 78.43 23 5.2 No 0 0.97 Yes 0 0 No -48 0.67 Yes 44 85.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59852650 - NM_032043 BRIP1 0 . . . 3.24 72.91 19 4.53 No 48 0.89 Yes 0 0 No -27 0.67 Yes 38 76.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131906651 + NM_005732 RAD50 0 . . . 1.06 0 18 5.28 No 25 1.29 Yes 0 0 No -21 0.54 No 33 69.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41257209 - NM_007294 BRCA1 0 . . . 7.25 73.11 48 4.83 No 7 -1.83 No 0 0 No -32 0.61 No 39 47.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90990985 - NM_002485 NBN 0 . . . 0.17 73.86 19 4.58 No 66 0.09 No 0 0 No -18 0.85 Yes 48 92.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89633881 + NM_000314 PTEN 0 . . . 7.28 82.1 32 5.74 Yes 12 1.64 Yes 0 0 No -31 0.39 No 46 48.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68416509 + NM_133509 RAD51B 0 . . . 2.82 77.31 13 4.9 No 16 0.09 No 0 0 No -21 0.7 Yes 42 46.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47708065 + NM_000251 MSH2 0 . . . 5.96 78.92 18 5.22 No 17 1.01 Yes 0 0 No -21 0.63 No 41 81.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90960754 - NM_002485 NBN 0 . . . 7.85 83.41 29 7.19 Yes 25 0.83 Yes 0 0 No -28 0.79 Yes 45 57.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131946928 + NM_005732 RAD50 0 . . . 2.09 64.68 27 6.24 Yes 12 0.72 No 0 0 No -26 0.88 Yes 46 35.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45806877 - NM_001048171 MUTYH 0 . . . 7.64 74.82 18 4.93 No 1 0.81 Yes 0 0 No -20 0.55 No 24 62.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104183526 - NM_001100119 XRCC3 0 . . . 7.47 90.23 16 4.69 No -2 0.08 No 0 0 No -42 0.67 Yes 51 77.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89710133 + NM_000314 PTEN 0 . . . 5.12 72.86 15 4.41 No 9 0.69 No 0 0 No -32 0.79 Yes 49 76.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29121870 - NM_001005735 CHEK2 0 . . . 3.08 84 49 8.31 Yes 2 1.5 Yes 0 0 No -43 0.6 No 44 47.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6040291 - NM_000535 PMS2 0 . . . 0.21 73.06 22 6 Yes 33 1.31 Yes 0 0 No -21 0.77 Yes 41 62.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108204834 + NM_000051 ATM 0 . . . 5.45 80.37 14 5.53 No 50 -4.65 No 0 0 No -21 0.47 No 44 77.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84401806 - NM_139076 FAM175A 0 . . . 5.88 87.11 12 4.79 No 58 0.27 No 0 0 No -24 0.7 Yes 46 54.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23633326 - NM_024675 PALB2 0 . . . 4.22 76.77 39 6.08 Yes 6 0.57 No 0 0 No -28 0.79 Yes 52 43.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68447087 + NM_133509 RAD51B 0 . . . 0.38 85.91 28 5.48 No 61 -5.09 No 0 0 No -27 0.92 Yes 45 54.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68383576 + NM_133509 RAD51B 0 . . . 4.6 0 26 6 Yes 4 1 Yes 0 0 No -23 0.54 No 54 59.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32891222 + NM_000059 BRCA2 0 . . . 1.8 74.68 32 7.13 Yes 54 0.65 No 0 0 No -28 0.73 Yes 42 37.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47650452 + NM_000251 MSH2 0 . . . 2.31 78.8 20 4.36 No 35 1.21 Yes 0 0 No -19 0.53 No 23 57.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59932220 - NM_032043 BRIP1 0 . . . 3.75 66.68 30 6.23 Yes 62 -3.85 No 0 0 No -29 0.78 Yes 36 62.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190690369 + NM_000534 PMS1 0 . . . 6.41 78.26 28 4.54 No 36 1.39 Yes 0 0 No -24 0.77 Yes 46 40.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47664100 + NM_000251 MSH2 0 . . . 2.17 0 28 6.72 Yes 1 0.35 No 0 0 No -27 0.7 Yes 23 47.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68468708 + NM_133509 RAD51B 0 . . . 4.08 71.48 18 4.6 No 15 0.84 Yes 0 0 No -27 0.7 Yes 43 88.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68826390 + NM_004360 CDH1 0 . . . 5.07 72.86 25 5.09 No 17 1.74 Yes 0 0 No -24 0.6 No 46 65.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90970370 - NM_002485 NBN 0 . . . 0.19 0 22 5.29 No 11 1.19 Yes 0 0 No -24 0.57 No 47 50.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32963218 + NM_000059 BRCA2 0 . . . 6.26 84.31 30 5.34 No 32 0.4 No 0 0 No -38 0.29 No 45 90.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131954198 + NM_005732 RAD50 0 . . . 2.56 70.8 17 5.53 No 42 0.98 Yes 0 0 No -30 0.59 No 41 34.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37049703 + NM_000249 MLH1 0 . . . 0.19 74.02 28 5.38 No 28 1.46 Yes 0 0 No -27 0.65 No 48 63.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215599541 - NM_000465 BARD1 0 . . . 2.98 79.65 17 5.23 No 63 0.9 Yes 0 0 No -16 0.45 No 53 73.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21992616 - NM_000077 CDKN2A 0 . . . 7.32 78.24 76 8.47 Yes 1 0.19 No 0 0 No -21 0.51 No 45 27.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69112147 + NM_133509 RAD51B 0 . . . 5.71 80.01 11 3.87 No 34 0.56 No 0 0 No -26 0.64 No 50 73.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94195403 - NM_005591 MRE11 0 . . . 1.6 0 13 6.19 Yes 62 0.32 No 0 0 No -26 0.55 No 14 53.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104173359 - NM_001100119 XRCC3 0 . . . 2.31 0 22 5.6 Yes 69 -5.01 No 0 0 No -25 0.63 No 38 63.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68945492 + NM_133509 RAD51B 0 . . . 0.72 0 19 5.39 No 22 1.22 Yes 0 0 No -18 0.56 No 36 95.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215611706 - NM_000465 BARD1 0 . . . 3.2 0 26 5.35 No 36 1.06 Yes 0 0 No -25 0.73 Yes 22 93.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69089622 + NM_133509 RAD51B 0 . . . 7.13 77.01 39 6.07 Yes -2 1.02 Yes 0 0 No -20 0.72 Yes 45 56.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59766299 - NM_032043 BRIP1 0 . . . 1.83 66.71 33 8.47 Yes 32 1.46 Yes 0 0 No -32 0.66 No 43 63.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68381017 + NM_133509 RAD51B 0 . . . 6.51 80.73 20 5.47 No 23 1.16 Yes 0 0 No -25 0.71 Yes 49 49.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68959611 + NM_133509 RAD51B 0 . . . 3.23 74.76 27 4.77 No 49 0.85 Yes 0 0 No -26 0.36 No 40 76.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84392627 - NM_139076 FAM175A 0 . . . 2.66 79.86 16 4.65 No 4 1.37 Yes 0 0 No -43 0.68 Yes 54 80.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23641506 - NM_024675 PALB2 0 . . . 2.2 91.35 26 6.69 Yes 76 -4.65 No 0 0 No -25 0.54 No 45 89.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68498991 + NM_133509 RAD51B 0 . . . 2.82 69.74 21 4.52 No -1 1.15 Yes 0 0 No -20 0.66 No 27 35.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59919864 - NM_032043 BRIP1 0 . . . 2.26 63.52 33 6.23 Yes 27 0.32 No 0 0 No -28 0.46 No 37 48.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68644065 + NM_133509 RAD51B 0 . . . 8.75 84.71 38 6.96 Yes 73 -4.43 No 0 0 No -29 0.67 Yes 46 73.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32937551 + NM_000059 BRCA2 0 . . . 3.64 75.52 13 4.36 No 46 -2.74 No 0 0 No -50 0.47 No 21 34.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47648735 + NM_000251 MSH2 0 . . . 2.49 71.87 18 3.58 No 8 0.98 Yes 0 0 No -21 0.78 Yes 44 89.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68315649 + NM_133509 RAD51B 0 . . . 7.69 86.05 12 3.87 No 20 0.64 No 0 0 No -31 0.6 No 38 49.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47805300 + NM_000251 MSH2 0 . . . 3.81 72.13 17 4.47 No 35 0.26 No 0 0 No -16 0.44 No 45 71.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190730654 + NM_000534 PMS1 0 . . . 1.92 73.22 35 6.7 Yes 3 0.51 No 0 0 No -34 0.66 No 42 78.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59899495 - NM_032043 BRIP1 0 . . . 5.68 77.29 29 6.06 Yes 8 1.04 Yes 0 0 No -22 0.64 No 50 49.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69151243 + NM_133509 RAD51B 0 . . . 0.16 73.85 18 5.66 Yes 35 -0.75 No 0 0 No -25 0.86 Yes 23 46.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190679147 + NM_000534 PMS1 0 . . . 3.78 76.3 23 5.26 No 70 -5.04 No 0 0 No -22 0.52 No 51 41.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108134544 + NM_000051 ATM 0 . . . 5.93 73.3 19 5.48 No 61 -4.84 No 0 0 No -34 0.51 No 42 44.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41024832 + NM_001164269 RAD51 0 . . . 2.48 70.85 21 5.04 No 13 0.49 No 0 0 No -20 0.61 No 41 89.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47780591 + NM_000251 MSH2 0 . . . 1.32 0 22 4.51 No 6 1.27 Yes 0 0 No -21 0.75 Yes 11 44.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90959412 - NM_002485 NBN 0 . . . 4.04 94.2 23 3.5 No 3 1.15 Yes 0 0 No -22 0.59 No 43 65.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68579253 + NM_133509 RAD51B 0 . . . 2.13 67.46 15 4.33 No 22 1.15 Yes 0 0 No -26 0.51 No 43 92.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47769221 + NM_000251 MSH2 0 . . . 6.71 85.25 28 4.52 No 27 1.05 Yes 0 0 No -27 0.61 No 48 51.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52438543 - NM_004656 BAP1 0 . . . 1.06 77.34 21 4.22 No 70 1.53 Yes 0 0 No -28 0.87 Yes 48 43.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68791036 + NM_004360 CDH1 0 . . . 4.71 84.17 42 5.63 Yes 36 1.42 Yes 0 0 No -21 0.52 No 22 55.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68845432 + NM_004360 CDH1 0 . . . 8.05 80.58 21 8.79 Yes 73 1.6 Yes 0 0 No -26 0.48 No 43 77.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23618947 - NM_024675 PALB2 0 . . . 1 0 20 5.1 No 4 0.28 No 0 0 No -23 0.44 No 54 64.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190681645 + NM_000534 PMS1 0 . . . 7.11 79.62 44 7.2 Yes 72 0.53 No 0 0 No -25 0.51 No 43 65.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47642235 + NM_000251 MSH2 0 . . . 2.89 72.41 20 5.98 Yes 3 1.85 Yes 0 0 No -31 0.64 No 55 70.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32907979 + NM_000059 BRCA2 0 . . . 8.58 87.18 18 6.56 Yes 44 1.49 Yes 0 0 No -17 0.6 No 23 74.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41013592 + NM_001164269 RAD51 0 . . . 4.16 79.07 31 5.34 No 4 0.02 No 0 0 No -30 0.62 No 39 95.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29113645 - NM_001005735 CHEK2 0 . . . 6.24 82.31 74 6.48 Yes 60 1.08 Yes 0 0 No -25 0.67 Yes 31 52.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68928051 + NM_133509 RAD51B 0 . . . 5.17 82.17 33 5.18 No 54 0.02 No 0 0 No -27 0.53 No 30 64.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68422804 + NM_133509 RAD51B 0 . . . 8.04 81 25 4.82 No 32 1.36 Yes 0 0 No -24 0.76 Yes 48 75.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68780441 + NM_133509 RAD51B 0 . . . 3.05 78.8 27 4.55 No -4 1.22 Yes 0 0 No -29 0.91 Yes 46 41.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94223311 - NM_005591 MRE11 0 . . . 1.55 72.91 20 4.69 No 53 -4.89 No 0 0 No -41 0.88 Yes 50 72.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32968459 + NM_000059 BRCA2 0 . . . 1.3 0 21 5 No 60 1.64 Yes 0 0 No -20 0.73 Yes 34 70.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90969156 - NM_002485 NBN 0 . . . 4.2 64.51 22 5.74 Yes 74 -2.25 No 0 0 No -21 0.82 Yes 40 66.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29133817 - NM_001005735 CHEK2 0 . . . 1.32 68.42 24 5.17 No 0 0.15 No 0 0 No -23 0.95 Yes 48 55.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108166052 + NM_000051 ATM 0 . . . 6.27 84.59 16 5.2 No 3 0.96 Yes 0 0 No -20 0.5 No 47 50.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68667395 + NM_133509 RAD51B 0 . . . 2.45 0 28 5.57 Yes 11 0.93 Yes 0 0 No -27 0.74 Yes 43 31.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190672077 + NM_000534 PMS1 0 . . . 1.58 57.5 17 3.88 No 51 1.5 Yes 0 0 No -24 0.56 No 37 27.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48017872 + NM_000179 MSH6 0 . . . 8.17 80.75 35 5.92 Yes 27 0.75 No 0 0 No -34 0.63 No 40 47.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59755282 - NM_032043 BRIP1 0 . . . 4.01 75.37 21 5.13 No 39 0.46 No 0 0 No -44 0.26 No 15 59.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68860711 + NM_004360 CDH1 0 . . . 1.41 0 33 7 Yes 44 1.21 Yes 0 0 No -32 0.8 Yes 49 49.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68499122 + NM_133509 RAD51B 0 . . . 0.53 70.23 13 6.08 Yes 9 0.9 Yes 0 0 No -30 0.48 No 26 62.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68590090 + NM_133509 RAD51B 0 . . . 7.96 82.28 40 7.01 Yes 12 1.67 Yes 0 0 No -22 0.72 Yes 46 89.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68697416 + NM_133509 RAD51B 0 . . . 2.25 76.92 31 6.08 Yes 35 -3.01 No 0 0 No -30 0.47 No 49 47.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47777495 + NM_000251 MSH2 0 . . . 1.45 79.09 29 5.56 Yes 65 -6.14 No 0 0 No -28 0.65 No 52 38.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108097535 + NM_000051 ATM 0 . . . 3.37 68.95 20 3.68 No 16 1.51 Yes 0 0 No -19 0.84 Yes 42 94.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68433532 + NM_133509 RAD51B 0 . . . 4.63 79.17 19 4.99 No 24 1.17 Yes 0 0 No -19 0.48 No 47 71.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131956394 + NM_005732 RAD50 0 . . . 1.24 0 35 6.24 Yes 67 1.54 Yes 0 0 No -34 0.35 No 50 25.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68305599 + NM_133509 RAD51B 0 . . . 6.34 74.48 23 6.02 Yes 47 1.04 Yes 0 0 No -23 0.63 No 50 39.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59893422 - NM_032043 BRIP1 0 . . . 1.99 81.11 27 5.5 No 41 0.22 No 0 0 No -25 0.37 No 49 62.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68614897 + NM_133509 RAD51B 0 . . . 2.82 77.78 17 5.54 No 4 0.26 No 0 0 No -27 0.56 No 43 60.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32939392 + NM_000059 BRCA2 0 . . . 3.35 75.58 24 5.63 Yes -3 0.91 Yes 0 0 No -27 0.57 No 50 78.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45802308 - NM_001048171 MUTYH 0 . . . 2.19 0 21 4.9 No 75 -2.85 No 0 0 No -20 0.94 Yes 54 56.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84400069 - NM_139076 FAM175A 0 . . . 8.62 84.44 12 5.39 No 72 1.15 Yes 0 0 No -26 0.32 No 48 91.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68433578 + NM_133509 RAD51B 0 . . . 5.29 86.11 24 5.08 No 70 1.15 Yes 0 0 No -24 0.46 No 40 84.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84383894 - NM_139076 FAM175A 0 . . . 2.3 70.61 16 7.58 Yes 72 0.97 Yes 0 0 No -24 0.68 Yes 45 47.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68355703 + NM_133509 RAD51B 0 . . . 1.58 74.27 56 7.07 Yes 24 0.61 No 0 0 No -25 0.78 Yes 34 88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89646025 + NM_000314 PTEN 0 . . . 6.79 77.62 17 4.8 No 38 2.29 Yes 0 0 No -16 0.38 No 20 95.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37061771 + NM_000249 MLH1 0 . . . 7.47 74.59 21 5.02 No 70 1.22 Yes 26 0.83 Yes -45 0.49 No 36 53.41 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr11 108173744 + NM_000051 ATM 0 . . . 1.74 72.69 39 7.39 Yes 45 1.92 Yes 24 0.36 Yes -38 0.74 Yes 40 47.16 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr17 59841490 - NM_032043 BRIP1 0 . . . 3.17 72.79 20 5.1 No 34 1.01 Yes 0 0 No -44 0.37 No 47 49.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41230040 - NM_007294 BRCA1 0 . . . 1.62 62.54 25 5.5 No 2 0.02 No 0 0 No -27 0.63 No 56 23.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68897169 + NM_133509 RAD51B 0 . . . 1.6 0 17 4.8 No 15 0.74 No 0 0 No -44 0.66 No 43 78.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68782598 + NM_004360 CDH1 0 . . . 6.18 81.21 12 5.28 No 43 -3.91 No 0 0 No -21 0.39 No 53 58.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152369025 - NM_005431 XRCC2 0 . . . 1.73 83.16 22 4.68 No 76 1.47 Yes 0 0 No -21 0.65 No 50 90.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68811463 + NM_004360 CDH1 0 . . . 4.21 84.41 16 4.66 No 22 1.7 Yes 0 0 No -21 0.44 No 36 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90945168 - NM_002485 NBN 0 . . . 2.41 80.93 17 4.8 No 49 -4.63 No 0 0 No -45 0.44 No 42 84.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69021253 + NM_133509 RAD51B 0 . . . 5.53 82.27 30 4.28 No 25 1.63 Yes 0 0 No -29 0.46 No 41 74.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75508629 - NM_001040108 MLH3 0 . . . 7.2 85.9 33 6.67 Yes 57 -1.78 No 0 0 No -32 0.6 No 43 82.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68803335 + NM_004360 CDH1 0 . . . 6.54 79.72 22 5.12 No 44 1.3 Yes 0 0 No -21 0.87 Yes 40 32.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68619387 + NM_133509 RAD51B 0 . . . 1.04 83.11 27 6.29 Yes 60 1.19 Yes 0 0 No -26 0.86 Yes 47 74.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32914601 + NM_000059 BRCA2 0 . . . 3.37 79.31 17 4.58 No 49 -5.02 No 0 0 No -43 0.43 No 36 25.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215627561 - NM_000465 BARD1 0 . . . 3.33 72.41 28 5.38 No 8 0.65 No 0 0 No -27 0.56 No 46 65.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68443112 + NM_133509 RAD51B 0 . . . 2.31 80.38 22 5.8 Yes 19 1.13 Yes 0 0 No -21 0.39 No 26 78.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68990490 + NM_133509 RAD51B 0 . . . 1.34 72.45 42 5.36 No 37 -0.71 No 0 0 No -28 0.41 No 47 55.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190674678 + NM_000534 PMS1 0 . . . 5.08 72.35 24 4.99 No 66 -5.25 No 0 0 No -23 0.73 Yes 44 83.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29082108 - NM_001005735 CHEK2 0 . . . 4.92 87 24 6.82 Yes 3 1.36 Yes 0 0 No -23 0.92 Yes 55 23.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68856993 + NM_004360 CDH1 0 . . . 1.08 0 17 5.29 No -4 0.4 No 0 0 No -21 0.44 No 62 27.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69100035 + NM_133509 RAD51B 0 . . . 2.05 77.03 31 5.64 Yes 36 1.09 Yes 0 0 No -30 0.68 Yes 51 80.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215667907 - NM_000465 BARD1 0 . . . 1.99 77.85 18 6.08 Yes 53 -2.02 No 0 0 No -33 0.65 No 50 64.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48020151 + NM_000179 MSH6 0 . . . 5.72 77.93 28 5.82 Yes 9 1.39 Yes 0 0 No -27 0.77 Yes 41 72.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131927279 + NM_005732 RAD50 0 . . . 0.68 61.59 47 9.39 Yes 70 0.81 Yes 0 0 No -46 0.56 No 44 65.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108217371 + NM_000051 ATM 0 . . . 0.27 63.04 17 5.29 No 31 0.47 No 0 0 No -21 0.55 No 55 43.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37071364 + NM_000249 MLH1 0 . . . 3.78 81.41 20 5 No 61 2.01 Yes 0 0 No -19 0.48 No 12 64.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69101053 + NM_133509 RAD51B 0 . . . 0.4 75.68 28 5.38 No 5 0.78 Yes 0 0 No -43 0.76 Yes 47 48.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190693447 + NM_000534 PMS1 0 . . . 2.62 71.73 25 7.48 Yes 76 -5.53 No 0 0 No -31 0.56 No 53 61.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37061198 + NM_000249 MLH1 0 . . . 5.9 76.54 42 7.7 Yes 72 -6.39 No 0 0 No -41 0.79 Yes 45 61.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152349880 - NM_005431 XRCC2 0 . . . 6.42 77.58 16 6 Yes 43 0.2 No 0 0 No -26 0.73 Yes 49 38.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190653195 + NM_000534 PMS1 0 . . . 3.47 75.19 22 5.83 Yes 48 0.44 No 0 0 No -21 0.82 Yes 46 42.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59867403 - NM_032043 BRIP1 0 . . . 7.55 82.75 13 4.36 No 58 -2.89 No 0 0 No -28 0.4 No 46 67.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190698011 + NM_000534 PMS1 0 . . . 0.03 73.93 29 5.17 No 64 1.63 Yes 0 0 No -28 0.79 Yes 30 25.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41196046 - NM_007294 BRCA1 0 . . . 6.96 82.69 28 5.83 Yes 56 0.97 Yes 0 0 No -27 0.86 Yes 51 69.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68527747 + NM_133509 RAD51B 0 . . . 8.15 90.22 39 6.11 Yes 10 0.85 Yes 0 0 No -27 0.85 Yes 48 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33428764 - NM_002878 RAD51D 0 . . . 4.87 75 26 5.2 No 39 0.95 Yes 0 0 No -26 0.52 No 42 37.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131976679 + NM_005732 RAD50 0 . . . 2 0 29 5.35 No -3 0.11 No 0 0 No -28 0.5 No 47 84.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108205868 + NM_000051 ATM 0 . . . 2.66 0 25 5.57 Yes 17 0.73 No 0 0 No -24 0.71 Yes 36 78.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47688176 + NM_000251 MSH2 0 . . . 0.2 76.03 17 6.89 Yes 28 1.08 Yes 0 0 No -27 0.8 Yes 24 34.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84400860 - NM_139076 FAM175A 0 . . . 2.95 89.22 21 5.9 Yes 64 1.26 Yes 0 0 No -20 0.78 Yes 47 75.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68492525 + NM_133509 RAD51B 0 . . . 4.59 78.45 15 5.39 No 53 1.4 Yes 0 0 No -53 0.27 No 48 69.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68699788 + NM_133509 RAD51B 0 . . . 4.53 76.81 38 5.97 Yes 7 0.86 Yes 0 0 No -37 0.62 No 51 82.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69119739 + NM_133509 RAD51B 0 . . . 3.79 76.04 20 4.53 No 53 0.96 Yes 0 0 No -19 0.95 Yes 39 57.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89624210 + NM_000314 PTEN 0 . . . 9.08 90.84 20 4.46 No NA NA NA 0 0 No -20 0.31 No 46 82.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68948962 + NM_133509 RAD51B 0 . . . 4.44 70.8 28 4.67 No -2 0.85 Yes 0 0 No -27 0.78 Yes 45 72.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68309714 + NM_133509 RAD51B 0 . . . 3.91 61.47 25 7.75 Yes 18 1.03 Yes 0 0 No -24 0.87 Yes 40 62.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215649988 - NM_000465 BARD1 0 . . . 1.01 72.05 15 5.31 No 56 -4.73 No 0 0 No -26 0.72 Yes 47 63.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47759985 + NM_000251 MSH2 0 . . . 3.64 91.41 24 4.93 No 34 0.84 Yes 0 0 No -24 0.36 No 49 83.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59832844 - NM_032043 BRIP1 0 . . . 4.5 84.34 21 5.54 No 51 1.44 Yes 0 0 No -24 0.44 No 50 76.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108133069 + NM_000051 ATM 0 . . . 1.78 70.55 52 7.31 Yes 58 1.2 Yes 0 0 No -51 0.36 No 51 45.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68548885 + NM_133509 RAD51B 0 . . . 2.1 72.33 39 6.58 Yes 30 1.29 Yes 0 0 No -33 0.54 No 28 78.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40991838 + NM_001164269 RAD51 0 . . . 2.56 66.39 20 5.66 Yes 69 -5.3 No 0 0 No -25 0.8 Yes 40 52.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108130690 + NM_000051 ATM 0 . . . 3.62 82.79 13 4.36 No 51 0.56 No 0 0 No -47 0.55 No 43 48.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68703179 + NM_133509 RAD51B 0 . . . 0.81 0 22 4.8 No 13 0.57 No 0 0 No -21 0.97 Yes 45 78.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23638812 - NM_024675 PALB2 0 . . . 3.97 84.41 50 6.61 Yes 65 0.9 Yes 0 0 No -39 0.86 Yes 36 64.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68380072 + NM_133509 RAD51B 0 . . . 0.82 71.21 56 8.28 Yes 75 1.16 Yes 0 0 No -55 0.86 Yes 44 36.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68851323 + NM_133509 RAD51B 0 . . . 6.05 73.99 16 5.1 No 41 1.57 Yes 0 0 No -23 0.5 No 17 67.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190685546 + NM_000534 PMS1 0 . . . 5.27 95.13 15 4.65 No 62 1.19 Yes 0 0 No -26 0.36 No 49 93.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59820737 - NM_032043 BRIP1 0 . . . 2.33 73.11 22 5.29 No 8 1.55 Yes 0 0 No -26 0.63 No 44 57.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7577034 - NM_000546 TP53 0 . . . 2.13 0 9 3.11 No 6 0.13 No 0 0 No -36 0.54 No 52 66.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68360268 + NM_133509 RAD51B 0 . . . 2.76 68.89 18 4.9 No 16 -1.9 No 0 0 No -17 0.59 No 42 44.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215614035 - NM_000465 BARD1 0 . . . 4.92 81.48 23 5.91 Yes 66 -2.17 No 0 0 No -22 0.64 No 36 72.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48018721 + NM_000179 MSH6 0 . . . 1.84 0 32 5.23 No 9 1.29 Yes 0 0 No -28 0.32 No 48 50.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69058415 + NM_133509 RAD51B 0 . . . 2.17 74.93 36 5.94 Yes 14 -1.78 No 0 0 No -30 0.68 Yes 17 30.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68391290 + NM_133509 RAD51B 0 . . . 0.8 61.8 41 7.16 Yes 69 -5.25 No 0 0 No -24 0.69 Yes 49 61.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33425839 - NM_002878 RAD51D 0 . . . 7.65 84.27 24 6.16 Yes 50 0.54 No 0 0 No -23 0.84 Yes 44 83.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69005755 + NM_133509 RAD51B 0 . . . 4.13 82.61 26 5.75 Yes 48 0.92 Yes 0 0 No -30 0.58 No 46 90.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131897138 + NM_005732 RAD50 0 . . . 0.07 77.82 58 8 Yes 13 1.04 Yes 0 0 No -25 0.91 Yes 45 91.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59940645 - NM_032043 BRIP1 0 . . . 3.67 0 32 7.87 Yes 60 0.48 No 0 0 No -31 0.6 No 40 91.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108239514 + NM_000051 ATM 0 . . . 2.25 72.06 20 4.65 No -4 0.24 No 0 0 No -30 0.59 No 62 61.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1213929 + NM_000455 STK11 0 . . . 3.74 0 35 6.93 Yes 4 0.5 No 0 0 No -32 0.6 No 38 73.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59935277 - NM_032043 BRIP1 0 . . . 9.14 82.56 35 5.49 No 44 1.18 Yes 0 0 No -24 0.81 Yes 40 81.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59759626 - NM_032043 BRIP1 0 . . . 4.01 75.42 22 5.19 No 42 -3.24 No 0 0 No -53 0.55 No 47 40.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69018791 + NM_133509 RAD51B 0 . . . 9.71 90.52 23 5.74 Yes 60 0.18 No 0 0 No -23 0.28 No 44 65.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94210294 - NM_005591 MRE11 0 . . . 1.66 72.29 18 5.83 Yes 70 -6.4 No 0 0 No -25 0.49 No 52 71.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69079884 + NM_133509 RAD51B 0 . . . 0.09 74.68 13 4.24 No 73 0.65 No 0 0 No -37 0.63 No 54 89.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29099883 - NM_001005735 CHEK2 0 . . . 2.27 0 40 6.7 Yes 70 1.43 Yes 0 0 No -22 0.81 Yes 23 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7575247 - NM_000546 TP53 0 . . . 3.87 80.37 41 6.31 Yes 8 1.1 Yes 0 0 No -40 0.67 Yes 50 89.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105199868 + NM_021930 RINT1 0 . . . 0.98 63.56 25 5.18 No 47 0.63 No 0 0 No -24 0.8 Yes 43 68.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69076165 + NM_133509 RAD51B 0 . . . 10.42 80.55 15 5.97 Yes -1 0.88 Yes 0 0 No -26 0.79 Yes 48 86.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68521615 + NM_133509 RAD51B 0 . . . 6.4 81 25 4.76 No 1 0.65 No 0 0 No -24 0.65 No 42 61.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68902852 + NM_133509 RAD51B 0 . . . 6.85 0 20 4.95 No 17 -1.4 No 0 0 No -20 0.84 Yes 49 51.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68621786 + NM_133509 RAD51B 0 . . . 2.5 60.87 17 4.75 No 53 1 Yes 0 0 No -19 0.74 Yes 29 83.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29138591 - NM_001005735 CHEK2 0 . . . 7.25 76.25 19 4.79 No 57 0.96 Yes 0 0 No -44 0.8 Yes 51 77.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108240465 + NM_000051 ATM 0 . . . 0.11 64.67 23 5.71 Yes 42 -2.04 No 0 0 No -22 0.43 No 32 51.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41025744 + NM_001164269 RAD51 0 . . . 2.95 55.53 26 5 No 55 -2.1 No 0 0 No -25 0.93 Yes 45 43.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68868839 + NM_133509 RAD51B 0 . . . 0.19 71.93 27 5.2 No 1 0.33 No 0 0 No -26 0.77 Yes 47 82.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215653838 - NM_000465 BARD1 0 . . . 6.55 79.92 25 7.48 Yes 19 0.54 No 0 0 No -24 0.92 Yes 39 67.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68366467 + NM_133509 RAD51B 0 . . . 4.88 73.94 55 6.36 Yes 16 1.05 Yes 0 0 No -22 0.54 No 39 57.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131968482 + NM_005732 RAD50 0 . . . 2.46 72.49 23 4.83 No 34 0.53 No 0 0 No -22 0.47 No 51 68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59802714 - NM_032043 BRIP1 0 . . . 1.69 73.97 35 5.94 Yes 36 0.13 No 0 0 No -34 0.81 Yes 59 32.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90954660 - NM_002485 NBN 0 . . . 6.64 74.32 30 5.83 Yes 16 1.22 Yes 0 0 No -27 0.83 Yes 42 90.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68829775 + NM_004360 CDH1 0 . . . 0.25 69.71 23 5.98 Yes 56 1.64 Yes 0 0 No -22 0.77 Yes 45 86.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47736550 + NM_000251 MSH2 0 . . . 2.58 67.58 22 3.6 No 62 -4.78 No 0 0 No -21 0.45 No 36 26.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68612499 + NM_133509 RAD51B 0 . . . 2.01 68.94 35 6.16 Yes 55 0.69 No 0 0 No -34 0.39 No 41 56.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52433690 - NM_004656 BAP1 0 . . . 7.04 82.53 20 4.14 No 8 0.72 No 0 0 No -34 0.84 Yes 50 74.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105185145 + NM_021930 RINT1 0 . . . 3.68 70.85 16 5.1 No 23 1.81 Yes 0 0 No -15 0.22 No 40 69.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190652817 + NM_000534 PMS1 0 . . . 5.21 79.84 51 6.92 Yes 67 -5.62 No 0 0 No -42 0.59 No 38 27.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891676 + NM_133509 RAD51B 0 . . . 4.21 68.37 17 4.8 No 74 0.43 No 0 0 No -46 0.38 No 40 54.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68690411 + NM_133509 RAD51B 0 . . . 6.18 81.32 24 4.82 No 40 0.88 Yes 0 0 No -23 0.87 Yes 42 93.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47727346 + NM_000251 MSH2 0 . . . 0.5 78.66 28 5.36 No 9 1.09 Yes 0 0 No -27 0.62 No 49 89.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59824370 - NM_032043 BRIP1 0 . . . 6.15 64.97 20 5.74 Yes 71 1.39 Yes 0 0 No -20 0.63 No 24 47.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59928343 - NM_032043 BRIP1 0 . . . 3.15 68.34 30 4.83 No 13 0.84 Yes 0 0 No -30 0.58 No 45 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68805376 + NM_004360 CDH1 0 . . . 4.37 72.41 34 6 Yes 76 0.47 No 0 0 No -32 0.42 No 49 95.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84383891 - NM_139076 FAM175A 0 . . . 1.3 69.25 29 5.29 No 75 0.96 Yes 0 0 No -24 0.31 No 48 40.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68692169 + NM_133509 RAD51B 0 . . . 5.74 84.53 16 4.44 No 0 1.85 Yes 0 0 No -27 0.36 No 51 49.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45807918 - NM_001048171 MUTYH 0 . . . 5.37 79.97 25 4.72 No 18 0.58 No 0 0 No -41 0.57 No 40 53.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89623755 + NM_000314 PTEN 0 . . . 1.63 67.89 32 6.15 Yes 69 -0.38 No 0 0 No -32 0.41 No 61 14.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68664899 + NM_133509 RAD51B 0 . . . 2.29 0 22 4.33 No 59 0.75 No 0 0 No -21 0.94 Yes 35 91.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37072736 + NM_000249 MLH1 0 . . . 8.43 80.51 29 4.96 No 45 -2.21 No 0 0 No -22 0.53 No 47 45.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68624832 + NM_133509 RAD51B 0 . . . 5.98 77.79 17 4.8 No 6 1.34 Yes 0 0 No -22 0.39 No 52 86.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47699285 + NM_000251 MSH2 0 . . . 6.06 87.41 41 5.64 Yes 19 0.92 Yes 0 0 No -44 0.21 No 47 79.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190671026 + NM_000534 PMS1 0 . . . 5.75 74.8 24 4.96 No 29 1.17 Yes 0 0 No -23 0.73 Yes 29 76.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47642741 + NM_000251 MSH2 0 . . . 2.06 68.84 15 5.72 Yes 55 1.02 Yes 0 0 No -28 0.35 No 48 59.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41231050 - NM_007294 BRCA1 0 . . . 2.24 80.12 22 4.68 No 7 1.02 Yes 0 0 No -21 0.8 Yes 51 84.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89655284 + NM_000314 PTEN 0 . . . 3.64 68.92 19 4.8 No 73 0.69 No 0 0 No -16 0.55 No 48 82.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190702325 + NM_000534 PMS1 0 . . . 4.86 91.13 32 5.66 Yes 70 0.16 No 0 0 No -31 0.69 Yes 52 47.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23630338 - NM_024675 PALB2 0 . . . 7.6 81.52 40 4.35 No 47 2.74 Yes 0 0 No -26 0.69 Yes 11 74.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68646800 + NM_133509 RAD51B 0 . . . 1.67 70.23 23 4.68 No 26 -0.88 No 0 0 No -27 0.52 No 49 57.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68577221 + NM_133509 RAD51B 0 . . . 12.09 83.07 43 6.34 Yes 8 0.98 Yes 0 0 No -27 0.66 No 50 91.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68814229 + NM_004360 CDH1 0 . . . 0.06 0 24 5.36 No 45 1.15 Yes 0 0 No -23 0.53 No 30 82.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108151367 + NM_000051 ATM 0 . . . 4.45 72.89 17 6.05 Yes 0 0.62 No 0 0 No -24 0.42 No 43 65.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108094192 + NM_000051 ATM 0 . . . 0.76 58.62 16 4.47 No 63 0.77 Yes 0 0 No -15 0.63 No 52 55.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68388761 + NM_133509 RAD51B 0 . . . 2.21 0 13 4.69 No 73 0.88 Yes 0 0 No -18 0.5 No 27 63.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68815116 + NM_133509 RAD51B 0 . . . 7.67 86.68 18 5.92 Yes 75 -4.59 No 0 0 No -28 0.34 No 49 73.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68558898 + NM_133509 RAD51B 0 . . . 1.4 79.07 27 4.81 No 36 1.13 Yes 0 0 No -26 0.83 Yes 49 62.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33441264 - NM_002878 RAD51D 0 . . . 4.6 84.17 40 8.54 Yes 51 1.39 Yes 0 0 No -39 0.77 Yes 22 39.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190655068 + NM_000534 PMS1 0 . . . 4.72 81.58 29 5.48 No 38 1.26 Yes 0 0 No -28 0.9 Yes 48 64.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41009322 + NM_001164269 RAD51 0 . . . 2.95 68.95 29 5.47 No 66 -2.34 No 0 0 No -28 0.74 Yes 24 38.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21984659 - NM_000077 CDKN2A 0 . . . 2.05 72.09 60 7.89 Yes 6 0.71 No 0 0 No -45 0.54 No 42 68.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68958747 + NM_133509 RAD51B 0 . . . 0.54 68.74 44 8.66 Yes 33 1.3 Yes 0 0 No -38 0.74 Yes 25 88.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68872632 + NM_133509 RAD51B 0 . . . 5.04 66.22 32 5.74 Yes 17 0.35 No 0 0 No -31 0.84 Yes 41 95.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59878484 - NM_032043 BRIP1 0 . . . 1.07 61.71 12 5.57 Yes 36 0.44 No 0 0 No -22 0.39 No 41 74.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68847547 + NM_133509 RAD51B 0 . . . 3.41 79.42 14 4.25 No 5 1.43 Yes 0 0 No -24 0.84 Yes 34 55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56794423 + NM_058216 RAD51C 0 . . . 2.89 68.34 31 5.74 Yes 21 1.79 Yes 0 0 No -30 0.9 Yes 37 79.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48011863 + NM_000179 MSH6 0 . . . 3.88 68.29 21 7.21 Yes 11 0.78 Yes 0 0 No -20 0.83 Yes 47 65.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131912393 + NM_005732 RAD50 0 . . . 0.88 0 25 6.77 Yes 61 0.78 Yes 0 0 No -24 0.78 Yes 40 90.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68553196 + NM_133509 RAD51B 0 . . . 4.02 76.92 20 4.9 No 56 -2.23 No 0 0 No -20 0.74 Yes 48 49.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47653831 + NM_000251 MSH2 0 . . . 3.41 71.78 31 5.48 No 73 0.08 No 0 0 No -26 0.44 No 48 39.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190724325 + NM_000534 PMS1 0 . . . 4.83 65.36 16 5.8 Yes 1 0.11 No 0 0 No -21 0.91 Yes 52 53.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68543777 + NM_133509 RAD51B 0 . . . 4.18 73.03 14 5.45 No 37 1.17 Yes 0 0 No -20 0.4 No 41 66.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32947058 + NM_000059 BRCA2 0 . . . 2.77 72.87 36 6.22 Yes 5 0.61 No 0 0 No -35 0.57 No 41 60.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190732008 + NM_000534 PMS1 0 . . . 2.38 81.18 33 5.19 No 22 0.79 Yes 0 0 No -22 0.76 Yes 51 51.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47699349 + NM_000251 MSH2 0 . . . 1 63.56 53 6.81 Yes 36 0.26 No 0 0 No -33 0.65 No 22 51.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59806906 - NM_032043 BRIP1 0 . . . 5.64 80.89 18 5.91 Yes 4 1.46 Yes 0 0 No -28 0.54 No 44 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68621929 + NM_133509 RAD51B 0 . . . 5.96 88.76 58 5.09 No 65 -3.72 No 0 0 No -29 0.84 Yes 48 69.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59828819 - NM_032043 BRIP1 0 . . . 1.03 0 19 4.86 No 76 0.82 Yes 0 0 No -21 0.52 No 39 41.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68787426 + NM_004360 CDH1 0 . . . 5.69 80.12 29 5.32 No 7 1.18 Yes 0 0 No -28 0.72 Yes 51 83.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190670752 + NM_000534 PMS1 0 . . . 2.46 85.44 45 7.43 Yes 7 0.45 No 0 0 No -49 0.73 Yes 51 77.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59922375 - NM_032043 BRIP1 0 . . . 0.76 67.09 29 5.56 Yes 54 0.57 No 0 0 No -28 0.7 Yes 28 50.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68665943 + NM_133509 RAD51B 0 . . . 1.74 0 49 7.8 Yes 75 2.03 Yes 0 0 No -16 0.33 No 45 36.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68709409 + NM_133509 RAD51B 0 . . . 2.44 0 26 5.32 No 0 0.27 No 0 0 No -25 0.61 No 54 62.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21993341 - NM_000077 CDKN2A 0 . . . 3.17 75.12 19 4.36 No 57 0.81 Yes 0 0 No -30 0.34 No 42 44.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68795283 + NM_004360 CDH1 0 . . . 4.46 75.11 41 6.32 Yes 70 -1.81 No 0 0 No -40 0.37 No 46 86.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69117452 + NM_133509 RAD51B 0 . . . 5.49 76.53 18 4.9 No 67 0.48 No 0 0 No -21 0.6 No 51 43.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59927992 - NM_032043 BRIP1 0 . . . 3.06 0 28 6.12 Yes 37 1.01 Yes 0 0 No -27 0.66 Yes 36 60.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152351637 - NM_005431 XRCC2 0 . . . 1.69 73.27 19 5.16 No 68 0.69 No 0 0 No -23 0.46 No 33 41.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215652721 - NM_000465 BARD1 0 . . . 0.75 68.86 15 5 No 0 1.12 Yes 0 0 No -24 0.7 Yes 47 81.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75503671 - NM_001040108 MLH3 0 . . . 2.09 74.94 29 5.56 Yes 54 0.71 No 0 0 No -28 0.68 Yes 49 49.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69056935 + NM_133509 RAD51B 0 . . . 6.49 81.12 17 5.2 No 17 1.23 Yes 0 0 No -36 0.52 No 45 96.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29111338 - NM_001005735 CHEK2 0 . . . 1.47 66.72 49 8.96 Yes 60 -3.75 No 0 0 No -48 0.8 Yes 47 84.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190670677 + NM_000534 PMS1 0 . . . 4.29 79.03 46 6.62 Yes 40 0.69 No 0 0 No -37 0.81 Yes 45 46.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105187795 + NM_021930 RINT1 0 . . . 10.1 89.51 15 6.4 Yes 46 0.03 No 0 0 No -25 0.54 No 48 57.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68802829 + NM_004360 CDH1 0 . . . 4.65 85.51 15 4.6 No 68 0.53 No 0 0 No -28 0.54 No 52 44.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89703814 + NM_000314 PTEN 0 . . . 8.12 80.91 30 6 Yes 73 -5.86 No 0 0 No -29 0.55 No 40 48.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68442772 + NM_133509 RAD51B 0 . . . 3.11 75.33 19 5.48 No 44 1.07 Yes 0 0 No -18 0.42 No 31 88.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68790528 + NM_004360 CDH1 0 . . . 4.33 81.33 13 3.89 No -4 0.96 Yes 0 0 No -26 0.84 Yes 37 78.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131929675 + NM_005732 RAD50 0 . . . 2.85 71.08 23 5.39 No 69 -5.22 No 0 0 No -22 0.84 Yes 48 61.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68935619 + NM_133509 RAD51B 0 . . . 5.02 84.37 14 5.57 Yes 0 0.95 Yes 0 0 No -53 0.31 No 41 69.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47688404 + NM_000251 MSH2 0 . . . 4.44 67.24 36 7.78 Yes 29 0.67 No 0 0 No -35 0.65 No 45 56.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69027339 + NM_133509 RAD51B 0 . . . 0.31 74.68 29 5.57 Yes 53 0.63 No 0 0 No -28 0.92 Yes 53 80.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68425928 + NM_133509 RAD51B 0 . . . 8.02 81.95 32 5.57 Yes 10 0.7 No 0 0 No -31 0.38 No 48 87.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47710560 + NM_000251 MSH2 0 . . . 0.81 83.37 41 6.4 Yes 68 0.64 No 0 0 No -19 0.45 No 49 84.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41020293 + NM_001164269 RAD51 0 . . . 5.24 78.56 36 6 Yes 58 1.16 Yes 0 0 No -31 0.79 Yes 40 91.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41260509 - NM_007294 BRCA1 0 . . . 4.19 82.49 35 4.92 No 53 1.04 Yes 0 0 No -34 0.68 Yes 47 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21979248 - NM_000077 CDKN2A 0 . . . 1.66 80.9 19 4.8 No 49 0.55 No 0 0 No -18 0.51 No 42 79.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29089457 - NM_001005735 CHEK2 0 . . . 5.89 72.31 19 4.57 No 73 0.41 No 0 0 No -22 0.86 Yes 48 58.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68465599 + NM_133509 RAD51B 0 . . . 6.71 79.03 22 4.89 No 34 0.82 Yes 0 0 No -21 0.84 Yes 44 87.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215590490 - NM_000465 BARD1 0 . . . 2.25 68.1 25 6.72 Yes 15 1.67 Yes 0 0 No -24 0.88 Yes 43 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68401664 + NM_133509 RAD51B 0 . . . 6.43 86.95 14 5.29 No 10 1.29 Yes 0 0 No -34 0.54 No 48 90.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68805389 + NM_133509 RAD51B 0 . . . 9.4 88 37 5.81 Yes 32 0.23 No 0 0 No -26 0.6 No 39 71.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59757540 - NM_032043 BRIP1 0 . . . 8.88 82.63 36 7.64 Yes 13 1.43 Yes 0 0 No -35 0.84 Yes 45 94.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41221997 - NM_007294 BRCA1 0 . . . 1.72 80.22 31 7.14 Yes 67 -4.96 No 0 0 No -30 0.94 Yes 43 50.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59938910 - NM_032043 BRIP1 0 . . . 0.39 72.07 22 4.59 No 30 0.79 Yes 19 0.58 Yes -21 0.75 Yes 20 59.44 No BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: No chr5 131906303 + NM_005732 RAD50 0 . . . 4.07 88.04 29 5.92 Yes 45 0.05 No 0 0 No -28 0.93 Yes 50 74.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68395089 + NM_133509 RAD51B 0 . . . 1.21 82.11 27 6.07 Yes 76 -5.68 No 0 0 No -21 0.43 No 51 30.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68946480 + NM_133509 RAD51B 0 . . . 2.72 85.66 22 5.75 Yes 52 1.55 Yes 0 0 No -28 0.58 No 49 91.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68469949 + NM_133509 RAD51B 0 . . . 2.25 0 33 5.81 Yes 24 0.58 No 0 0 No -32 0.93 Yes 54 73.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59775796 - NM_032043 BRIP1 0 . . . 0.05 70.53 26 5.56 Yes 44 0.39 No 0 0 No -25 0.6 No 43 36.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59757458 - NM_032043 BRIP1 0 . . . 2.66 68.34 26 5.29 No 23 1.57 Yes 0 0 No -25 0.58 No 45 68.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47651690 + NM_000251 MSH2 0 . . . 0.75 80.12 22 5.66 Yes 69 0.79 Yes 0 0 No -21 0.78 Yes 50 92.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68781768 + NM_004360 CDH1 0 . . . 3.77 71.26 39 5.1 No 21 0.26 No 0 0 No -26 0.93 Yes 47 86.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190736028 + NM_000534 PMS1 0 . . . 1.04 56.5 37 5 No 1 0.82 Yes 0 0 No -29 0.85 Yes 42 42.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108234556 + NM_000051 ATM 0 . . . 2.22 76.4 58 5.99 Yes 10 1.47 Yes 0 0 No -31 0.52 No 48 94.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131980483 + NM_005732 RAD50 0 . . . 2.77 87.93 15 5.74 Yes 28 1.56 Yes 0 0 No -14 0.27 No 50 88.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68672999 + NM_133509 RAD51B 0 . . . 8.55 92.98 15 5.97 Yes 69 0.94 Yes 0 0 No -20 0.53 No 44 94.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32943705 + NM_000059 BRCA2 0 . . . 0.37 0 19 4.96 No 48 0.85 Yes 0 0 No -22 0.67 Yes 19 31.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21972733 - NM_000077 CDKN2A 0 . . . 3.54 78.78 14 3.59 No 39 0.41 No 0 0 No -24 0.53 No 37 68.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68745909 + NM_133509 RAD51B 0 . . . 1.29 0 36 5.66 Yes 50 0.97 Yes 0 0 No -30 0.3 No 52 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89670539 + NM_000314 PTEN 0 . . . 6.12 82.73 25 5.39 No 6 1.15 Yes 0 0 No -24 0.9 Yes 38 71.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37056565 + NM_000249 MLH1 0 . . . 8.97 82.65 19 4.24 No 2 0.54 No 0 0 No -22 0.89 Yes 41 85.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68748488 + NM_133509 RAD51B 0 . . . 0.52 69.87 46 6.78 Yes 65 -5.56 No 0 0 No -22 0.71 Yes 56 31.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29113529 - NM_001005735 CHEK2 0 . . . 5.34 74.82 16 5.42 No 38 1.61 Yes 0 0 No -23 0.56 No 20 83.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47696263 + NM_000251 MSH2 0 . . . 6.58 80.12 17 5.84 Yes 59 0.6 No 0 0 No -33 0.83 Yes 38 73.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89627017 + NM_000314 PTEN 0 . . . 1.58 64.09 38 6.4 Yes 23 0.46 No 0 0 No -37 0.85 Yes 48 64.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152360507 - NM_005431 XRCC2 0 . . . 2.68 66.24 41 4.08 No 29 0.17 No 0 0 No -23 0.18 No 42 81.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68983878 + NM_133509 RAD51B 0 . . . 4.12 84.68 30 5.96 Yes 27 1.28 Yes 0 0 No -29 0.56 No 31 96.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47698651 + NM_000251 MSH2 0 . . . 3.88 74.85 21 7 Yes 35 0.03 No 0 0 No -20 0.76 Yes 47 60.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6026105 - NM_000535 PMS2 0 . . . 6.04 84.99 26 6.53 Yes 58 1.16 Yes 0 0 No -25 0.73 Yes 31 70.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68942606 + NM_133509 RAD51B 0 . . . 5.28 79.01 25 5 No 48 0.44 No 0 0 No -24 0.64 No 40 49.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41228965 - NM_007294 BRCA1 0 . . . 7.04 93.3 10 4.36 No 63 0.82 Yes 0 0 No -28 0.71 Yes 38 57.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21983473 - NM_000077 CDKN2A 0 . . . 4.63 82.54 23 4.51 No -1 0.91 Yes 0 0 No -22 0.78 Yes 44 73.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68744476 + NM_133509 RAD51B 0 . . . 1.62 83.14 21 4.8 No 33 -1.4 No 0 0 No -20 0.87 Yes 37 50.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47747037 + NM_000251 MSH2 0 . . . 0.92 81.88 19 5.32 No 73 0.99 Yes 0 0 No -18 0.57 No 53 66.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68552755 + NM_133509 RAD51B 0 . . . 8.54 83.82 16 5.38 No 14 0.33 No 0 0 No -43 0.21 No 44 90.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59814850 - NM_032043 BRIP1 0 . . . 9.45 73.15 33 5.92 Yes 51 1.64 Yes 0 0 No -24 0.44 No 21 94.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94179472 - NM_005591 MRE11 0 . . . 0.78 84.22 9 3.87 No 33 0.98 Yes 0 0 No -37 0.73 Yes 50 39.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68364725 + NM_133509 RAD51B 0 . . . 0.59 61.54 44 5.38 No 62 0.12 No 0 0 No -32 0.6 No 48 49.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68831474 + NM_133509 RAD51B 0 . . . 2.9 73.56 22 4.44 No 39 0.27 No 0 0 No -28 0.63 No 49 71.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69085332 + NM_133509 RAD51B 0 . . . 9.8 90.75 38 5.95 Yes 49 1.27 Yes 0 0 No -32 0.35 No 42 67.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105197067 + NM_021930 RINT1 0 . . . 1.37 69.87 26 6.4 Yes 46 0.87 Yes 0 0 No -25 0.83 Yes 49 43.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29136820 - NM_001005735 CHEK2 0 . . . 4.98 79.21 17 4.33 No 7 0.02 No 0 0 No -16 0.56 No 44 55.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131935368 + NM_005732 RAD50 0 . . . 0.16 81.72 34 6.18 Yes 13 0.61 No 0 0 No -37 0.61 No 50 70.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131973407 + NM_005732 RAD50 0 . . . 3.6 82.35 17 5.97 Yes 5 1.22 Yes 0 0 No -22 0.64 No 42 67.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6045771 - NM_000535 PMS2 0 . . . 1.03 56.87 19 5.47 No 47 0.39 No 0 0 No -18 0.55 No 37 36.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68415529 + NM_133509 RAD51B 0 . . . 2.76 63.56 14 4.24 No 57 1 Yes 0 0 No -50 0.35 No 43 62.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52436206 - NM_004656 BAP1 0 . . . 2.05 65.39 22 5.29 No 39 1.77 Yes 0 0 No -21 0.91 Yes 19 93.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68813412 + NM_004360 CDH1 0 . . . 6.91 82.89 27 5.2 No 8 1.14 Yes 0 0 No -26 0.67 Yes 50 87.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52435492 - NM_004656 BAP1 0 . . . 4.41 68.69 47 6.92 Yes 28 -2.35 No 0 0 No -29 0.43 No 48 58.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47733271 + NM_000251 MSH2 0 . . . 0.01 78.78 35 7.14 Yes 74 0.29 No 0 0 No -34 0.56 No 46 56.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89686087 + NM_000314 PTEN 0 . . . 2.36 0 28 5.59 Yes -2 0.88 Yes 0 0 No -27 0.58 No 45 55.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47746481 + NM_000251 MSH2 0 . . . 3.59 78.17 29 4.84 No 53 0.16 No 0 0 No -29 0.78 Yes 32 87.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90960576 - NM_002485 NBN 0 . . . 4.31 74.09 76 6.29 Yes 69 1.41 Yes 0 0 No -20 0.84 Yes 28 30.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47739851 + NM_000251 MSH2 0 . . . 1.22 80.35 26 6.09 Yes 27 1.28 Yes 0 0 No -25 0.53 No 51 74.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108213831 + NM_000051 ATM 0 . . . 5.33 83.75 32 4.89 No 38 0.09 No 0 0 No -31 0.58 No 45 56.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152350524 - NM_005431 XRCC2 0 . . . 7.64 92.25 27 4.31 No 72 0.21 No 0 0 No -26 0.73 Yes 47 58.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68898649 + NM_133509 RAD51B 0 . . . 5.96 73.88 29 4.98 No 24 0.26 No 0 0 No -28 0.71 Yes 31 58.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105191926 + NM_021930 RINT1 0 . . . 7.81 86.87 38 7.14 Yes 67 0.31 No 0 0 No -26 0.6 No 49 75.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47655931 + NM_000251 MSH2 0 . . . 2.61 67.96 20 4.15 No 50 0.98 Yes 0 0 No -19 0.4 No 46 56.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90975282 - NM_002485 NBN 0 . . . 2.56 64.71 29 5.57 Yes 60 1.32 Yes 0 0 No -28 0.54 No 43 65.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68456006 + NM_133509 RAD51B 0 . . . 2.41 73.68 23 4.2 No 4 1.71 Yes 0 0 No -27 0.54 No 54 60.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68718575 + NM_133509 RAD51B 0 . . . 8.47 87.14 21 7.28 Yes 28 0.65 No 0 0 No -26 0.65 No 42 36.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32923923 + NM_000059 BRCA2 0 . . . 1.27 76.63 38 4.26 No 67 -4.96 No 0 0 No -22 0.68 Yes 43 51.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7569220 - NM_000546 TP53 0 . . . 1.65 74.23 14 4.47 No 69 0.48 No 0 0 No -22 0.67 Yes 38 55.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68578599 + NM_133509 RAD51B 0 . . . 9.36 96.9 27 4.96 No 24 0.64 No 0 0 No -22 0.83 Yes 49 51.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90981334 - NM_002485 NBN 0 . . . 3.3 59.76 19 5.38 No 51 1.25 Yes 0 0 No -18 0.64 No 48 65.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59910137 - NM_032043 BRIP1 0 . . . 3.87 70.19 19 3.54 No 32 0.68 No 0 0 No -25 0.46 No 44 64.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37072106 + NM_000249 MLH1 0 . . . 7.45 82.24 22 6.07 Yes 4 0.37 No 0 0 No -31 0.77 Yes 41 92.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69046592 + NM_133509 RAD51B 0 . . . 4.61 73.41 26 5.38 No 19 0.34 No 0 0 No -22 0.35 No 39 87.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1203932 + NM_000455 STK11 0 . . . 4.93 72.55 19 5.57 Yes 45 -2.73 No 0 0 No -18 0.81 Yes 41 37.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68836668 + NM_133509 RAD51B 0 . . . 0.9 73.04 31 5.79 Yes 75 0.82 Yes 0 0 No -30 0.91 Yes 36 35.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108127689 + NM_000051 ATM 0 . . . 7.21 72.63 13 4.9 No 35 -1.85 No 0 0 No -23 0.3 No 48 44.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59936345 - NM_032043 BRIP1 0 . . . 3.43 81.66 25 5.67 Yes 3 0.56 No 0 0 No -25 0.89 Yes 49 90.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68414619 + NM_133509 RAD51B 0 . . . 8.29 79.1 34 7.27 Yes 44 0.46 No 0 0 No -33 0.89 Yes 41 88.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47800810 + NM_000251 MSH2 0 . . . 5.26 75.6 18 5.48 No 65 1.87 Yes 0 0 No -27 0.77 Yes 34 76.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68683115 + NM_133509 RAD51B 0 . . . 5.54 73.91 20 7.14 Yes 6 0.58 No 0 0 No -19 0.87 Yes 52 81.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190658055 + NM_000534 PMS1 0 . . . 3.46 64.99 27 5.38 No 41 0.64 No 0 0 No -26 0.86 Yes 52 46.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69110061 + NM_133509 RAD51B 0 . . . 7.39 80.42 32 5.87 Yes 58 1.11 Yes 0 0 No -25 0.65 No 40 78.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69029230 + NM_133509 RAD51B 0 . . . 9.55 94.34 40 6.47 Yes 18 1.57 Yes 0 0 No -39 0.7 Yes 40 79.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69145332 + NM_133509 RAD51B 0 . . . 10.34 79.9 34 5.68 Yes 63 -3.27 No 0 0 No -26 0.37 No 40 49.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108190425 + NM_000051 ATM 0 . . . 0.79 67.24 23 5.37 No 38 1.56 Yes 0 0 No -22 0.82 Yes 20 78.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190733553 + NM_000534 PMS1 0 . . . 9.23 81.87 48 9.02 Yes 16 1.07 Yes 0 0 No -47 0.8 Yes 42 93.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56796921 + NM_058216 RAD51C 0 . . . 0.92 60.29 15 3.52 No 68 -1.95 No 0 0 No -18 0.76 Yes 51 39.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41249660 - NM_007294 BRCA1 0 . . . 2.68 70.54 36 6.09 Yes 25 -3.03 No 0 0 No -35 0.6 No 51 68.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68625334 + NM_133509 RAD51B 0 . . . 2.14 67.58 33 3.92 No 33 0.82 Yes 0 0 No -21 0.6 No 42 48.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89667426 + NM_000314 PTEN 0 . . . 9.51 79.18 22 5.29 No 6 0.78 Yes 0 0 No -21 0.73 Yes 33 66.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68361761 + NM_133509 RAD51B 0 . . . 2.3 0 9 5.54 No 24 0.69 No 0 0 No -27 0.36 No 34 53.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7563961 - NM_000546 TP53 0 . . . 6.56 90.31 12 4.24 No 7 1.28 Yes 0 0 No -34 0.55 No 51 86.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68882867 + NM_133509 RAD51B 0 . . . 1.78 74.98 55 7.4 Yes 21 1.56 Yes 0 0 No -28 0.46 No 48 38.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215591869 - NM_000465 BARD1 0 . . . 0.88 54.15 33 5.31 No 21 1.65 Yes 0 0 No -19 0.69 Yes 37 52.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68795096 + NM_133509 RAD51B 0 . . . 5.49 74.19 37 6.06 Yes 72 1.79 Yes 0 0 No -36 0.87 Yes 47 42.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68683172 + NM_133509 RAD51B 0 . . . 0.62 70.56 40 6.58 Yes 63 0.53 No 0 0 No -37 0.36 No 45 51.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105206823 + NM_021930 RINT1 0 . . . 5.66 76.84 16 4.66 No 43 0.71 No 0 0 No -15 0.37 No 44 55.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69040199 + NM_133509 RAD51B 0 . . . 3.86 74.6 19 5.38 No 4 1.74 Yes 0 0 No -19 0.74 Yes 38 90.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40992145 + NM_001164269 RAD51 0 . . . 2.77 68.79 27 5.49 No 38 0.89 Yes 0 0 No -26 0.66 Yes 41 74.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59767340 - NM_032043 BRIP1 0 . . . 4.71 82.94 36 5.91 Yes 34 0.46 No 0 0 No -25 0.59 No 24 80.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23617259 - NM_024675 PALB2 0 . . . 1.39 68.54 33 6.08 Yes 9 1.06 Yes 0 0 No -32 0.37 No 32 59.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131936332 + NM_005732 RAD50 0 . . . 4.11 81.92 17 4.79 No 9 1.59 Yes 0 0 No -24 0.56 No 49 89.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59816906 - NM_032043 BRIP1 0 . . . 1.67 82.15 94 7.87 Yes 17 0.53 No 0 0 No -35 0.38 No 46 45.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68496764 + NM_133509 RAD51B 0 . . . 0.84 71.77 25 3.84 No 37 0.36 No 0 0 No -27 0.59 No 47 85.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68469638 + NM_133509 RAD51B 0 . . . 5.41 72.03 16 4.69 No 74 -0.91 No 0 0 No -21 0.54 No 52 47.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68946978 + NM_133509 RAD51B 0 . . . 3.85 86.46 22 5.16 No 11 1.29 Yes 0 0 No -26 0.43 No 47 92.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47689862 + NM_000251 MSH2 0 . . . 6.06 75.22 36 6.63 Yes 10 0.77 Yes 0 0 No -31 0.72 Yes 42 76.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52439746 - NM_004656 BAP1 0 . . . 4.64 77.92 28 8 Yes 38 -2.67 No 0 0 No -27 0.73 Yes 31 54.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6015626 - NM_000535 PMS2 0 . . . 5.18 73.34 28 6.82 Yes 21 1.72 Yes 0 0 No -27 0.88 Yes 42 91.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59768173 - NM_032043 BRIP1 0 . . . 1.04 0 19 5 No 32 0.8 Yes 0 0 No -23 0.59 No 41 53.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68894841 + NM_133509 RAD51B 0 . . . 4.19 82.69 17 5.19 No 72 1.15 Yes 0 0 No -16 0.53 No 40 52.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68519535 + NM_133509 RAD51B 0 . . . 11.32 87.72 40 5.43 No 69 -1.53 No 0 0 No -33 0.81 Yes 37 80.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6010209 - NM_000535 PMS2 0 . . . 2.6 62.54 15 5.52 No 67 -4.5 No 0 0 No -31 0.32 No 41 18.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37075634 + NM_000249 MLH1 0 . . . 0.02 0 38 7 Yes 8 0.65 No 0 0 No -33 0.59 No 39 94.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108195050 + NM_000051 ATM 0 . . . 5.3 87.13 14 4.64 No 69 0.29 No 0 0 No -19 0.77 Yes 39 71.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52441634 - NM_004656 BAP1 0 . . . 4.23 81.16 24 4.17 No 60 0.32 No 0 0 No -23 0.66 No 45 85.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215659833 - NM_000465 BARD1 0 . . . 1.41 0 25 6.63 Yes 46 1.13 Yes 0 0 No -24 0.96 Yes 41 65.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59895547 - NM_032043 BRIP1 0 . . . 11.2 77.53 26 5.17 No 47 0.28 No 0 0 No -25 0.61 No 34 53.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29088182 - NM_001005735 CHEK2 0 . . . 0.53 52.2 22 4.9 No -1 0.5 No 0 0 No -22 0.32 No 39 36.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41026136 + NM_001164269 RAD51 0 . . . 0.09 74.68 30 5.92 Yes 4 0.41 No 0 0 No -28 0.71 Yes 54 85.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68795390 + NM_133509 RAD51B 0 . . . 2.96 67.3 16 4.69 No 32 2.08 Yes 0 0 No -15 0.29 No 46 20.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108140772 + NM_000051 ATM 0 . . . 4.5 67.89 25 4.75 No 40 0.22 No 0 0 No -22 0.43 No 40 65.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68661074 + NM_133509 RAD51B 0 . . . 7.01 88.29 14 4.47 No 58 0.61 No 0 0 No -24 0.54 No 52 74.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89721495 + NM_000314 PTEN 0 . . . 3.14 0 20 6.02 Yes 15 1.6 Yes 0 0 No -23 0.54 No 43 93.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75507821 - NM_001040108 MLH3 0 . . . 2.93 59.6 23 6.48 Yes 5 0.13 No 0 0 No -22 0.59 No 53 64.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68788269 + NM_133509 RAD51B 0 . . . 1.42 81.47 21 5.66 Yes 26 1.36 Yes 0 0 No -30 0.69 Yes 48 84.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59939576 - NM_032043 BRIP1 0 . . . 3.68 65.98 30 7.83 Yes 55 0.87 Yes 0 0 No -29 0.72 Yes 46 85.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1215191 + NM_000455 STK11 0 . . . 0.24 0 34 6.24 Yes -4 1.01 Yes 0 0 No -33 0.9 Yes 51 46.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33429997 - NM_002878 RAD51D 0 . . . 5.27 75.94 30 7.13 Yes 7 1.44 Yes 0 0 No -29 0.8 Yes 41 77.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108182519 + NM_000051 ATM 0 . . . 6.48 75.52 27 5.74 Yes 11 0.2 No 0 0 No -26 0.92 Yes 44 97.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47712693 + NM_000251 MSH2 0 . . . 0.23 62.98 30 5.94 Yes 33 1.35 Yes 0 0 No -29 0.72 Yes 49 75.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68831041 + NM_004360 CDH1 0 . . . 1.86 76.51 20 4.92 No 11 0.5 No 0 0 No -19 0.59 No 47 55.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47657156 + NM_000251 MSH2 0 . . . 4.49 73.33 26 5 No 61 0.79 Yes 0 0 No -25 0.67 Yes 32 87.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69017386 + NM_133509 RAD51B 0 . . . 0.08 67.59 10 5.74 Yes 3 0.19 No 0 0 No -23 0.73 Yes 43 59.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68600233 + NM_133509 RAD51B 0 . . . 2.89 82.03 47 6.25 Yes 2 1.43 Yes 0 0 No -24 0.71 Yes 16 49.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108148225 + NM_000051 ATM 0 . . . 2.22 73.07 28 5.49 No 48 0.61 No 0 0 No -27 0.69 Yes 47 39.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90944032 - NM_002485 NBN 0 . . . 6.14 88.68 31 5.52 No 9 1.13 Yes 0 0 No -30 0.82 Yes 49 94.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59930699 - NM_032043 BRIP1 0 . . . 9.47 89.49 16 4.47 No 2 1.21 Yes 0 0 No -25 0.87 Yes 45 49.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32925552 + NM_000059 BRCA2 0 . . . 1.74 75.36 21 4.31 No 76 0.58 No 0 0 No -24 0.92 Yes 38 25.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75519043 - NM_001040108 MLH3 0 . . . 5.59 76.98 22 4.63 No 8 0.59 No 0 0 No -49 0.48 No 50 91.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68454329 + NM_133509 RAD51B 0 . . . 4.08 75.93 17 5.48 No 64 0.69 No 0 0 No -23 0.38 No 38 86.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37076614 + NM_000249 MLH1 0 . . . 0.01 0 23 5.09 No 53 0.95 Yes 0 0 No -22 0.92 Yes 41 90.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131934488 + NM_005732 RAD50 0 . . . 2.15 82.7 46 5.02 No 28 -2.84 No 0 0 No -30 0.48 No 48 81.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190667870 + NM_000534 PMS1 0 . . . 5.9 84.22 18 4.87 No 6 0.26 No 0 0 No -24 0.26 No 39 38.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47780657 + NM_000251 MSH2 0 . . . 1.44 76.45 27 4.27 No 72 1.25 Yes 0 0 No -26 0.95 Yes 48 79.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41275196 - NM_007294 BRCA1 0 . . . 0.94 76.68 57 8.35 Yes 35 -4.11 No 0 0 No -27 0.6 No 49 62.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68880518 + NM_133509 RAD51B 0 . . . 2.68 0 17 6.93 Yes -3 1.12 Yes 0 0 No -25 0.44 No 61 54.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152361166 - NM_005431 XRCC2 0 . . . 2.3 79.27 20 5.73 Yes -1 0.14 No 0 0 No -19 0.53 No 46 80.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32917366 + NM_000059 BRCA2 0 . . . 8.88 84.5 15 5.47 No 61 -2.72 No 0 0 No -14 0.45 No 31 64.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105187960 + NM_021930 RINT1 0 . . . 1.49 79.09 22 5.36 No 27 0.49 No 0 0 No -28 0.47 No 52 69.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215636449 - NM_000465 BARD1 0 . . . 0.28 87.48 54 7.06 Yes 70 -5.12 No 0 0 No -33 0.65 No 45 79.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37043944 + NM_000249 MLH1 0 . . . 5.08 84.51 40 5.98 Yes 0 0.29 No 0 0 No -29 0.56 No 40 47.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29134768 - NM_001005735 CHEK2 0 . . . 8.53 84 17 4.75 No 55 0.94 Yes 0 0 No -33 0.55 No 49 54.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59903240 - NM_032043 BRIP1 0 . . . 1.65 0 20 5.1 No 15 -1.49 No 0 0 No -59 0.74 Yes 44 63.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90954804 - NM_002485 NBN 0 . . . 5.74 78.64 21 4.58 No 17 1.45 Yes 0 0 No -18 0.8 Yes 41 74.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68385070 + NM_133509 RAD51B 0 . . . 1.73 86.71 16 6.04 Yes 76 1.48 Yes 0 0 No -34 0.42 No 51 41.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90948079 - NM_002485 NBN 0 . . . 6.45 75.64 12 5.07 No 0 0.59 No 0 0 No -23 0.75 Yes 37 72.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69037378 + NM_133509 RAD51B 0 . . . 6.51 83.05 29 5.53 No 3 2.24 Yes 0 0 No -42 0.41 No 46 69.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37056939 + NM_000249 MLH1 0 . . . 2.85 78.98 23 5.13 No 29 0.35 No 0 0 No -44 0.73 Yes 29 60.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69122238 + NM_133509 RAD51B 0 . . . 3.92 71.76 35 6.89 Yes 59 0.1 No 0 0 No -34 0.86 Yes 53 28.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68370077 + NM_133509 RAD51B 0 . . . 1.35 77.84 17 4.8 No 29 -0.52 No 0 0 No -16 0.71 Yes 49 36.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94223924 - NM_005591 MRE11 0 . . . 0.26 0 21 6.09 Yes 15 0.72 No 0 0 No -20 0.68 Yes 43 94.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41228170 - NM_007294 BRCA1 0 . . . 8.67 85.67 31 8.11 Yes 10 0.92 Yes 0 0 No -28 0.74 Yes 48 89.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68647105 + NM_133509 RAD51B 0 . . . 5.23 69.64 13 5.48 No 51 1.07 Yes 0 0 No -40 0.52 No 48 46.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89724181 + NM_000314 PTEN 0 . . . 3.08 67.29 43 6.92 Yes 47 0.39 No 0 0 No -29 0.63 No 42 68.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68621085 + NM_133509 RAD51B 0 . . . 1.15 64.6 21 4.17 No 54 1.15 Yes 0 0 No -21 0.76 Yes 37 65.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68683918 + NM_133509 RAD51B 0 . . . 1.12 73.91 24 5 No 75 0.63 No 0 0 No -23 0.64 No 30 83.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215628188 - NM_000465 BARD1 0 . . . 0.78 0 28 5.62 Yes 63 0.92 Yes 0 0 No -27 0.65 No 49 87.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59764308 - NM_032043 BRIP1 0 . . . 5.2 83.38 20 4.9 No 25 -2.37 No 0 0 No -19 0.92 Yes 48 35.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90997005 - NM_002485 NBN 0 . . . 3.6 82.78 29 4.54 No 33 1.62 Yes 30 0.51 Yes -31 0.59 No 47 59.22 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr2 190650037 + NM_000534 PMS1 0 . . . 3.35 68.44 18 4.69 No 50 1.02 Yes 19 0.69 Yes -44 0.44 No 28 42.15 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr17 59788392 - NM_032043 BRIP1 0 . . . 3.97 84.41 44 7.41 Yes 63 0.67 No 0 0 No -43 0.78 Yes 46 35.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59906753 - NM_032043 BRIP1 0 . . . 5.57 71.33 29 7.48 Yes 57 0.36 No 0 0 No -28 0.94 Yes 45 89.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59898304 - NM_032043 BRIP1 0 . . . 1.94 0 31 6.56 Yes 52 0.94 Yes 0 0 No -33 0.6 No 32 68.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84403618 - NM_139076 FAM175A 0 . . . 7.21 82.49 21 4.05 No 28 0.48 No 0 0 No -26 0.51 No 47 52.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68880992 + NM_133509 RAD51B 0 . . . 8.05 88.8 48 6.18 Yes 12 0.62 No 0 0 No -47 0.57 No 46 78.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59789065 - NM_032043 BRIP1 0 . . . 3.6 85.02 21 5.84 Yes 4 1.2 Yes 0 0 No -24 0.52 No 54 61.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190725199 + NM_000534 PMS1 0 . . . 4.45 80.02 13 3.15 No 68 0.59 No 0 0 No -50 0.43 No 36 46.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108230212 + NM_000051 ATM 0 . . . 5 69.96 26 4.82 No 25 0.04 No 0 0 No -35 0.58 No 45 55.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6028993 - NM_000535 PMS2 0 . . . 0.04 67.9 19 4.31 No 74 0.51 No 0 0 No -23 0.68 Yes 55 33.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108152899 + NM_000051 ATM 0 . . . 3.03 79.82 47 5.6 Yes 33 1.41 Yes 0 0 No -27 0.36 No 25 92.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75484076 - NM_001040108 MLH3 0 . . . 6.5 85.02 13 5.29 No 8 1.33 Yes 0 0 No -21 0.66 No 50 91.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68937922 + NM_133509 RAD51B 0 . . . 3.86 64.27 38 4.04 No 24 -2.68 No 0 0 No -26 0.34 No 49 60.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68513097 + NM_133509 RAD51B 0 . . . 2.74 69.78 26 4.78 No 55 1.72 Yes 0 0 No -25 0.61 No 40 88.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7571930 - NM_000546 TP53 0 . . . 3.4 77.82 19 4.8 No 27 -1.49 No 0 0 No -45 0.57 No 54 59.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94210345 - NM_005591 MRE11 0 . . . 0.9 69.01 22 6.56 Yes 54 0.45 No 0 0 No -31 0.37 No 41 24.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640158 + NM_000251 MSH2 0 . . . 6.19 78.95 40 7.04 Yes 60 0.72 No 0 0 No -30 0.47 No 42 59.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40998532 + NM_001164269 RAD51 0 . . . 0.26 0 18 4.62 No 20 1.1 Yes 0 0 No -49 0.46 No 38 81.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131982057 + NM_005732 RAD50 0 . . . 3.31 0 28 5.14 No 11 0.87 Yes 0 0 No -27 0.81 Yes 47 84.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68915231 + NM_133509 RAD51B 0 . . . 2.56 66.04 34 8.89 Yes -3 1.01 Yes 0 0 No -33 0.82 Yes 36 93.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190708262 + NM_000534 PMS1 0 . . . 0.22 77.52 14 5.48 No 29 1.08 Yes 0 0 No -23 0.61 No 50 72.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41260909 - NM_007294 BRCA1 0 . . . 0.05 84.22 22 6.39 Yes 8 -0.4 No 0 0 No -21 0.81 Yes 50 53.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131980253 + NM_005732 RAD50 0 . . . 2.81 61.54 52 7.01 Yes 10 0.85 Yes 0 0 No -28 0.83 Yes 48 54.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69045940 + NM_133509 RAD51B 0 . . . 2.71 79.51 17 4.89 No 37 0.34 No 0 0 No -24 0.71 Yes 50 70.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68396443 + NM_133509 RAD51B 0 . . . 1.09 0 82 9.33 Yes 38 0.44 No 0 0 No -33 0.48 No 40 82.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59851639 - NM_032043 BRIP1 0 . . . 5.32 73.92 23 4.77 No 21 0.91 Yes 0 0 No -22 0.91 Yes 46 79.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68427516 + NM_133509 RAD51B 0 . . . 2.07 68.64 23 5.25 No 20 0.57 No 0 0 No -22 0.56 No 38 65.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59914751 - NM_032043 BRIP1 0 . . . 4.46 71.31 30 5.83 Yes 2 1.72 Yes 0 0 No -37 0.57 No 39 56.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152348630 - NM_005431 XRCC2 0 . . . 0.89 68.53 16 6.12 Yes 73 0.25 No 0 0 No -31 0.64 No 40 53.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68316044 + NM_133509 RAD51B 0 . . . 8.74 86.58 25 5.2 No 58 0.77 No 0 0 No -24 0.73 Yes 9 42.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41211482 - NM_007294 BRCA1 0 . . . 5.59 81.29 18 5.39 No 44 0.04 No 0 0 No -22 0.68 Yes 42 49.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94148715 - NM_005591 MRE11 0 . . . 1.06 0 15 5.39 No -2 0.27 No 0 0 No -28 0.27 No 54 28.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215590335 - NM_000465 BARD1 0 . . . 7.95 85.86 38 5.86 Yes 4 0.99 Yes 0 0 No -16 0.75 Yes 47 41.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68823250 + NM_004360 CDH1 0 . . . 0.21 64.89 33 6.24 Yes 66 0.78 Yes 0 0 No -33 0.85 Yes 37 20.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32967222 + NM_000059 BRCA2 0 . . . 7.33 86.36 29 5.74 Yes 64 1.61 Yes 0 0 No -30 0.49 No 47 54.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105180689 + NM_021930 RINT1 0 . . . 3.63 73.33 38 6.92 Yes 47 0.73 No 0 0 No -37 0.69 Yes 48 77.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108177807 + NM_000051 ATM 0 . . . 4.55 77.83 20 5.56 Yes 12 0.19 No 0 0 No -19 0.43 No 46 89.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68490999 + NM_133509 RAD51B 0 . . . 1.36 80.57 19 5 No -2 1.32 Yes 0 0 No -30 0.5 No 50 75.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69148460 + NM_133509 RAD51B 0 . . . 4.5 81.3 34 5.9 Yes 8 1.53 Yes 0 0 No -33 0.69 Yes 43 47.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47668658 + NM_000251 MSH2 0 . . . 2.67 78.97 26 8.4 Yes 7 1.16 Yes 0 0 No -25 0.52 No 51 75.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41257524 - NM_007294 BRCA1 0 . . . 2.49 65.95 18 5.48 No 11 0.71 No 0 0 No -17 0.47 No 36 71.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68970415 + NM_133509 RAD51B 0 . . . 10.25 87.94 16 5.08 No 29 0.55 No 0 0 No -46 0.59 No 29 74.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33447652 - NM_002878 RAD51D 0 . . . 3.6 71.18 36 4.56 No 54 -2.12 No 0 0 No -23 0.5 No 38 57.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75482100 - NM_001040108 MLH3 0 . . . 2.68 73.89 36 9.84 Yes 11 0.83 Yes 0 0 No -35 0.75 Yes 47 93.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41271028 - NM_007294 BRCA1 0 . . . 0.71 0 64 9.06 Yes 26 0.26 No 0 0 No -31 0.5 No 45 74.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41250354 - NM_007294 BRCA1 0 . . . 3.56 74.78 26 4.83 No 16 0.48 No 0 0 No -39 0.51 No 42 53.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108139538 + NM_000051 ATM 0 . . . 1.02 62.17 19 4.69 No 74 -5.92 No 0 0 No -42 0.5 No 43 30.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56787310 + NM_058216 RAD51C 0 . . . 0.12 58.78 44 6.52 Yes 24 1.15 Yes 0 0 No -24 0.71 Yes 34 68.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69060902 + NM_133509 RAD51B 0 . . . 0.42 68.38 25 5.39 No 64 1.02 Yes 0 0 No -22 0.68 Yes 50 64.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89683868 + NM_000314 PTEN 0 . . . 8.52 70.48 25 4.9 No 30 1.04 Yes 0 0 No -24 0.54 No 39 77.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29085770 - NM_001005735 CHEK2 0 . . . 9.29 81.95 27 6.49 Yes 5 1.93 Yes 0 0 No -30 0.77 Yes 41 70.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68709722 + NM_133509 RAD51B 0 . . . 0.9 82.3 17 5.55 No 29 1.16 Yes 0 0 No -29 0.4 No 16 29.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68779655 + NM_004360 CDH1 0 . . . 2.11 76.82 26 5.26 No 13 -2.27 No 0 0 No -23 0.6 No 50 76.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68829528 + NM_004360 CDH1 0 . . . 4.17 66.35 20 5.56 Yes 45 1.39 Yes 0 0 No -24 0.88 Yes 39 70.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89709166 + NM_000314 PTEN 0 . . . 0.6 61 46 7.05 Yes 43 0.81 Yes 0 0 No -45 0.95 Yes 36 91.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7579425 - NM_000546 TP53 0 . . . 2.21 69.56 13 6.36 Yes 66 -1.25 No 0 0 No -21 0.42 No 50 62.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104180772 - NM_001100119 XRCC3 0 . . . 4 82.27 24 5.98 Yes NA NA NA 0 0 No -23 0.83 Yes 14 59.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68501717 + NM_133509 RAD51B 0 . . . 3.67 69.48 33 5.74 Yes 20 1.03 Yes 0 0 No -26 0.65 No 38 81.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105177326 + NM_021930 RINT1 0 . . . 3.2 70.08 15 4.58 No 73 -6.41 No 0 0 No -35 0.44 No 42 91.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94208344 - NM_005591 MRE11 0 . . . 4.5 76.36 26 7.17 Yes 5 0.77 No 0 0 No -25 0.56 No 16 75.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29138172 - NM_001005735 CHEK2 0 . . . 2.72 69.81 32 5.85 Yes 11 0.46 No 0 0 No -31 0.53 No 47 51.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89729483 + NM_000314 PTEN 0 . . . 0.46 69.58 23 4.52 No 29 0.66 No 0 0 No -22 0.6 No 47 65.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190663722 + NM_000534 PMS1 0 . . . 5.1 73.74 39 4.47 No 11 0.17 No 0 0 No -25 0.49 No 51 66.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59865771 - NM_032043 BRIP1 0 . . . 4.44 76.58 27 4.14 No 6 0.28 No 0 0 No -27 0.68 Yes 46 64.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41212859 - NM_007294 BRCA1 0 . . . 2.85 75.7 33 5.74 Yes 51 0.37 No 0 0 No -28 0.67 Yes 51 70.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68325408 + NM_133509 RAD51B 0 . . . 4.87 84.88 27 6.08 Yes 0 0.47 No 0 0 No -26 0.57 No 50 51.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68724210 + NM_133509 RAD51B 0 . . . 4.03 65.56 28 5.47 No -2 0.26 No 0 0 No -57 0.32 No 53 48.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89708257 + NM_000314 PTEN 0 . . . 0.1 62.57 56 7.4 Yes 7 0.35 No 0 0 No -48 0.38 No 38 47.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69139951 + NM_133509 RAD51B 0 . . . 0.59 62.32 26 5.66 Yes -3 0.11 No 0 0 No -25 0.41 No 61 25.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32973457 + NM_000059 BRCA2 0 . . . 2.01 0 32 5.41 No 25 0.48 No 0 0 No -31 0.38 No 51 49.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190706710 + NM_000534 PMS1 0 . . . 9.8 88.49 26 5.09 No 32 0.74 No 0 0 No -25 0.76 Yes 46 86.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68738350 + NM_133509 RAD51B 0 . . . 5.73 72.87 29 7.96 Yes 6 0.15 No 0 0 No -21 0.38 No 52 55.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6028020 - NM_000535 PMS2 0 . . . 7.28 85.02 20 5.41 No 9 1.55 Yes 0 0 No -31 0.53 No 49 91.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59852980 - NM_032043 BRIP1 0 . . . 7.35 77.65 33 6.63 Yes 9 1.24 Yes 0 0 No -32 0.69 Yes 49 84.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68910224 + NM_133509 RAD51B 0 . . . 1.08 59.99 33 6.24 Yes 25 0.02 No 0 0 No -32 0.95 Yes 47 69.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29112697 - NM_001005735 CHEK2 0 . . . 8.54 77.12 26 6.24 Yes 11 0.56 No 0 0 No -25 0.48 No 35 59.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47773156 + NM_000251 MSH2 0 . . . 2.46 77.23 16 4.73 No -3 0.57 No 0 0 No -20 0.63 No 18 67.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131960799 + NM_005732 RAD50 0 . . . 3.78 84.41 28 6.34 Yes 11 0.47 No 0 0 No -31 0.5 No 47 61.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68657602 + NM_133509 RAD51B 0 . . . 4.02 64.22 29 4.75 No 55 0.64 No 0 0 No -28 0.65 No 46 56.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152349757 - NM_005431 XRCC2 0 . . . 2.37 69.58 22 6.08 Yes 69 -5.22 No 0 0 No -21 0.66 No 40 48.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190711926 + NM_000534 PMS1 0 . . . 7.09 83.49 25 8.41 Yes 41 0.15 No 0 0 No -24 0.8 Yes 45 90.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37061317 + NM_000249 MLH1 0 . . . 3.59 78.03 17 5.29 No 3 1.96 Yes 0 0 No -16 0.41 No 42 77.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215660911 - NM_000465 BARD1 0 . . . 9.06 96.72 29 7.19 Yes 1 0.12 No 0 0 No -28 0.7 Yes 44 70.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68840936 + NM_133509 RAD51B 0 . . . 5.71 78.36 29 6.32 Yes -2 1.14 Yes 0 0 No -28 0.92 Yes 38 51.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68966000 + NM_133509 RAD51B 0 . . . 2.34 77.26 26 5.66 Yes 21 0.04 No 0 0 No -25 0.91 Yes 50 62.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90973146 - NM_002485 NBN 0 . . . 4.61 67.08 23 5 No -3 0.31 No 0 0 No -26 0.62 No 50 82.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68712770 + NM_133509 RAD51B 0 . . . 1.87 68.68 21 4.83 No 71 -2.79 No 0 0 No -29 0.3 No 50 45.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7575515 - NM_000546 TP53 0 . . . 0.42 74.73 18 5.46 No 33 1.02 Yes 0 0 No -23 0.86 Yes 25 54.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59920228 - NM_032043 BRIP1 0 . . . 3.68 68.85 27 5.73 Yes 23 1.32 Yes 0 0 No -26 0.63 No 35 49.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41020364 + NM_001164269 RAD51 0 . . . 2.46 71.36 29 5.29 No 66 0.99 Yes 0 0 No -24 0.47 No 46 64.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37057128 + NM_000249 MLH1 0 . . . 4 70.37 16 2.91 No -3 1.08 Yes 0 0 No -28 0.83 Yes 45 89.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68343049 + NM_133509 RAD51B 0 . . . 4.54 82 15 6.25 Yes 74 0.7 No 0 0 No -26 0.34 No 46 76.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45806433 - NM_001048171 MUTYH 0 . . . 10.85 88.24 22 4.8 No 12 0.86 Yes 0 0 No -21 0.62 No 46 67.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56772161 + NM_058216 RAD51C 0 . . . 0.31 63.01 13 4.12 No 75 0.36 No 0 0 No -24 0.43 No 50 56.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215667109 - NM_000465 BARD1 0 . . . 2.62 58.18 28 5.92 Yes 70 -4.05 No 0 0 No -27 0.8 Yes 42 38.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32969918 + NM_000059 BRCA2 0 . . . 2.34 68.91 23 4.42 No 61 0.42 No 0 0 No -22 0.75 Yes 48 75.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59856006 - NM_032043 BRIP1 0 . . . 2.44 78.6 27 6.05 Yes 13 0.01 No 0 0 No -26 0.78 Yes 46 51.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32902560 + NM_000059 BRCA2 0 . . . 6.08 85.02 19 5.8 Yes 8 1.46 Yes 0 0 No -29 0.5 No 50 73.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105199275 + NM_021930 RINT1 0 . . . 0.67 71.93 15 4.47 No 2 0.03 No 0 0 No -22 0.73 Yes 38 55.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68871038 + NM_004360 CDH1 0 . . . 3.89 84.17 38 5.95 Yes 58 1.33 Yes 0 0 No -22 0.32 No 13 89.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23621482 - NM_024675 PALB2 0 . . . 1.04 66.02 23 5.39 No 15 0.89 Yes 0 0 No -22 0.71 Yes 43 64.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33430185 - NM_002878 RAD51D 0 . . . 0.16 66.64 30 5.92 Yes 52 0.74 No 0 0 No -29 0.37 No 46 60.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94203498 - NM_005591 MRE11 0 . . . 0.33 78.91 19 6.33 Yes 28 0.3 No 0 0 No -30 0.38 No 52 57.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68774533 + NM_133509 RAD51B 0 . . . 3.3 74.27 10 3.87 No 4 0.66 No 0 0 No -41 0.73 Yes 38 32.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68600319 + NM_133509 RAD51B 0 . . . 2.39 64.27 31 4.94 No 45 0.6 No 0 0 No -30 0.62 No 39 40.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105178805 + NM_021930 RINT1 0 . . . 8.25 87.12 12 3.53 No 11 0.16 No 0 0 No -56 0.45 No 43 80.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47800767 + NM_000251 MSH2 0 . . . 1.62 82.04 17 6.93 Yes 22 1.89 Yes 0 0 No -27 0.32 No 36 50.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94204381 - NM_005591 MRE11 0 . . . 1.16 72.34 32 5.89 Yes -4 0.2 No 0 0 No -31 0.48 No 47 56.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75485330 - NM_001040108 MLH3 0 . . . 0.41 72.47 51 6.91 Yes 42 1.83 Yes 0 0 No -26 0.44 No 16 57.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68474103 + NM_133509 RAD51B 0 . . . 0.32 61.84 36 6.47 Yes 7 1.16 Yes 0 0 No -35 0.79 Yes 29 41.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47648509 + NM_000251 MSH2 0 . . . 10.11 81.76 30 5.66 Yes 15 0.96 Yes 0 0 No -25 0.46 No 43 82.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94204470 - NM_005591 MRE11 0 . . . 1.89 0 21 5 No 5 -2.47 No 0 0 No -33 0.48 No 45 61.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69116612 + NM_133509 RAD51B 0 . . . 3.49 79.67 20 5.09 No -1 0.37 No 0 0 No -25 0.62 No 51 59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108138757 + NM_000051 ATM 0 . . . 2.7 70.26 11 4.12 No 76 1.58 Yes 0 0 No -22 0.61 No 40 87.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190673736 + NM_000534 PMS1 0 . . . 3.83 78.63 23 6.32 Yes 40 0.47 No 0 0 No -22 0.76 Yes 45 62.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29090005 - NM_001005735 CHEK2 0 . . . 0.5 62.82 26 5.66 Yes 75 -6.2 No 0 0 No -25 0.89 Yes 39 27.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94227652 - NM_005591 MRE11 0 . . . 1.71 75.91 20 5.1 No 42 -3.73 No 0 0 No -41 0.56 No 49 24.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47649230 + NM_000251 MSH2 0 . . . 7.88 77.18 21 4.72 No 40 0 No 0 0 No -20 0.59 No 44 60.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68867612 + NM_133509 RAD51B 0 . . . 0.57 0 21 4.9 No 76 0.64 No 0 0 No -21 0.6 No 51 71.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84398690 - NM_139076 FAM175A 0 . . . 2.12 80.38 22 4.66 No -1 0.05 No 0 0 No -21 0.6 No 45 69.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37088788 + NM_000249 MLH1 0 . . . 7.42 88.53 19 5.65 Yes 10 1.22 Yes 0 0 No -26 0.56 No 48 91.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68426851 + NM_133509 RAD51B 0 . . . 7.53 69.75 17 6.26 Yes 38 -0.89 No 0 0 No -24 0.66 No 45 27.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131921340 + NM_005732 RAD50 0 . . . 6.7 85.61 22 5.1 No 52 0.81 Yes 0 0 No -21 0.88 Yes 44 58.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131911702 + NM_005732 RAD50 0 . . . 3.52 78.09 16 4.37 No 9 0.7 No 0 0 No -27 0.52 No 49 76.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68357436 + NM_133509 RAD51B 0 . . . 2.21 70.56 19 5.81 Yes 52 0.79 Yes 0 0 No -27 0.79 Yes 45 38.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108165021 + NM_000051 ATM 0 . . . 3.39 73.71 18 6 Yes 62 0.61 No 0 0 No -29 0.65 No 48 52.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90994789 - NM_002485 NBN 0 . . . 2.44 79.28 23 5.35 No 62 0.23 No 0 0 No -22 0.77 Yes 42 92.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68520897 + NM_133509 RAD51B 0 . . . 7.78 84.85 42 10.28 Yes 35 0.6 No 0 0 No -41 0.84 Yes 47 75.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108217511 + NM_000051 ATM 0 . . . 5.78 81.02 28 6.13 Yes 67 1.33 Yes 0 0 No -27 0.81 Yes 45 68.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84383004 - NM_139076 FAM175A 0 . . . 2.28 70.44 12 5.98 Yes -2 0.43 No 0 0 No -16 0.4 No 27 43.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68397189 + NM_133509 RAD51B 0 . . . 1.67 71.7 31 5.83 Yes 68 0.94 Yes 0 0 No -30 0.71 Yes 44 83.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190718779 + NM_000534 PMS1 0 . . . 3.67 70.36 33 5.82 Yes 70 0.92 Yes 0 0 No -27 0.69 Yes 46 58.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47654035 + NM_000251 MSH2 0 . . . 1.1 83.12 13 4.8 No 53 0.65 No 0 0 No -16 0.36 No 43 67.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59802235 - NM_032043 BRIP1 0 . . . 0.13 0 17 5.39 No 41 1.48 Yes 0 0 No -16 0.29 No 17 75.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69085151 + NM_133509 RAD51B 0 . . . 8.81 91.58 38 6.56 Yes 19 0.77 No 0 0 No -37 0.52 No 47 76.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59851927 - NM_032043 BRIP1 0 . . . 2.9 0 25 4.9 No 40 0.8 Yes 0 0 No -25 0.29 No 33 95.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68722195 + NM_133509 RAD51B 0 . . . 2.35 77.16 56 6.74 Yes 2 1.11 Yes 0 0 No -20 0.71 Yes 47 67.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75489994 - NM_001040108 MLH3 0 . . . 0.43 78.7 19 5.47 No 29 1.53 Yes 0 0 No -29 0.42 No 50 86.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94199069 - NM_005591 MRE11 0 . . . 3.73 0 17 5.29 No 35 1.25 Yes 0 0 No -25 0.58 No 48 68.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68933074 + NM_133509 RAD51B 0 . . . 3.47 68.6 30 5.47 No 36 0.96 Yes 0 0 No -23 0.43 No 41 61.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41268396 - NM_007294 BRCA1 0 . . . 3.43 74.62 30 6 Yes 3 1.51 Yes 0 0 No -26 0.64 No 45 88.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47783830 + NM_000251 MSH2 0 . . . 0.59 67.31 39 5.11 No 42 -3.28 No 0 0 No -23 0.72 Yes 59 29.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215617992 - NM_000465 BARD1 0 . . . 3.5 81.36 21 5.14 No 39 0.33 No 0 0 No -20 0.73 Yes 46 80.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59827829 - NM_032043 BRIP1 0 . . . 6.11 83.59 16 5.39 No 6 0.64 No 0 0 No -30 0.38 No 44 52.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6029494 - NM_000535 PMS2 0 . . . 2.5 76.77 34 9.68 Yes 5 -2.37 No 0 0 No -33 0.57 No 54 43.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646127 + NM_133509 RAD51B 0 . . . 1.15 67.42 26 5.26 No 30 0.42 No 0 0 No -25 0.48 No 22 61.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68374914 + NM_133509 RAD51B 0 . . . 2.91 66.14 41 7.91 Yes 65 -4.94 No 0 0 No -30 0.53 No 42 39.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69028972 + NM_133509 RAD51B 0 . . . 0.93 72.36 18 4.36 No 47 1.39 Yes 0 0 No -17 0.77 Yes 53 46.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23639249 - NM_024675 PALB2 0 . . . 3.16 65.18 15 3.62 No 73 1.55 Yes 0 0 No -27 0.52 No 61 30.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68785457 + NM_133509 RAD51B 0 . . . 3.37 74.34 43 4.65 No 57 -3.3 No 0 0 No -25 0.32 No 45 60.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68457643 + NM_133509 RAD51B 0 . . . 7.67 87.15 34 6.24 Yes 38 0.38 No 0 0 No -33 0.66 No 51 67.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59894410 - NM_032043 BRIP1 0 . . . 0.83 0 25 5.35 No 21 1.01 Yes 0 0 No -22 0.77 Yes 31 42.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75483360 - NM_001040108 MLH3 0 . . . 2.23 89.78 42 6.1 Yes 22 0.32 No 0 0 No -41 0.81 Yes 49 47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68837272 + NM_133509 RAD51B 0 . . . 6.97 77.37 22 5.29 No 22 0.32 No 0 0 No -21 0.66 No 46 61.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89628191 + NM_000314 PTEN 0 . . . 9.69 87.79 17 4.8 No 24 0.3 No 0 0 No -45 0.53 No 43 91.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105191178 + NM_021930 RINT1 0 . . . 7.89 87.01 30 3.93 No 68 0.02 No 0 0 No -29 0.83 Yes 44 68.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68287869 + NM_133509 RAD51B 0 . . . 9.05 76.14 31 6.08 Yes 38 1.58 Yes 0 0 No -30 0.67 Yes 14 46.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52445560 - NM_004656 BAP1 0 . . . 1.55 74.77 13 4.88 No 56 -4.89 No 0 0 No -22 0.69 Yes 51 40.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59868604 - NM_032043 BRIP1 0 . . . 3.68 70.85 34 5.89 Yes 23 1.58 Yes 0 0 No -33 0.88 Yes 45 78.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104174405 - NM_001100119 XRCC3 0 . . . 4.81 80.31 26 5.26 No 58 -2.17 No 0 0 No -24 0.4 No 44 60.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152368650 - NM_005431 XRCC2 0 . . . 5.32 71.76 22 5.74 Yes 69 1.31 Yes 0 0 No -26 0.78 Yes 44 78.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68897224 + NM_133509 RAD51B 0 . . . 6.82 80.61 27 6.24 Yes 70 0.76 No 0 0 No -26 0.96 Yes 48 76.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89655169 + NM_000314 PTEN 0 . . . 3.08 74 27 4.94 No 51 -1.25 No 0 0 No -26 0.85 Yes 45 39.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29118740 - NM_001005735 CHEK2 0 . . . 0.8 80.71 9 4.9 No 7 0.19 No 0 0 No -20 0.44 No 50 45.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69109457 + NM_133509 RAD51B 0 . . . 3.67 69.37 44 6.73 Yes 2 0.89 Yes 0 0 No -12 0.3 No 37 75.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29092851 - NM_001005735 CHEK2 0 . . . 6.44 76.61 36 5.6 Yes 32 -2.08 No 0 0 No -25 0.57 No 45 67.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108168363 + NM_000051 ATM 0 . . . 1.82 72.54 26 5.49 No 21 0.37 No 0 0 No -25 0.85 Yes 48 90.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48019514 + NM_000179 MSH6 0 . . . 1.27 63.19 31 5.57 Yes 24 0.56 No 0 0 No -25 0.37 No 47 35.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68445205 + NM_133509 RAD51B 0 . . . 6.68 75.4 17 4.8 No 13 0.47 No 0 0 No -25 0.43 No 45 75.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105176707 + NM_021930 RINT1 0 . . . 5.82 78.73 13 4.8 No 16 1.11 Yes 0 0 No -17 0.29 No 42 90.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41228726 - NM_007294 BRCA1 0 . . . 5.78 78.7 21 5.04 No 23 1.06 Yes 0 0 No -45 0.45 No 43 57.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68784225 + NM_004360 CDH1 0 . . . 2.21 76.24 19 4.24 No 62 1.15 Yes 0 0 No -21 0.93 Yes 55 46.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59927247 - NM_032043 BRIP1 0 . . . 0.47 66.58 16 4.69 No 69 -3.04 No 0 0 No -44 0.73 Yes 49 51.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68373399 + NM_133509 RAD51B 0 . . . 3.38 71.1 25 6.24 Yes 3 -2.22 No 0 0 No -24 0.82 Yes 25 60.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68841534 + NM_133509 RAD51B 0 . . . 3.41 72.68 21 4.68 No 10 0.64 No 0 0 No -20 0.5 No 48 77.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68393999 + NM_133509 RAD51B 0 . . . 0.46 68.83 36 7.48 Yes 43 0.15 No 0 0 No -35 0.47 No 45 65.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89697982 + NM_000314 PTEN 0 . . . 2.78 61.55 52 7.15 Yes 9 1.07 Yes 0 0 No -18 0.42 No 49 67.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1208718 + NM_000455 STK11 0 . . . 2.13 65.86 21 5.55 No 16 1.1 Yes 0 0 No -20 0.78 Yes 42 95.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131944561 + NM_005732 RAD50 0 . . . 2.24 69.62 30 5.57 Yes 15 -2.15 No 0 0 No -26 0.38 No 49 85.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68507899 + NM_133509 RAD51B 0 . . . 5.02 71.13 13 4.36 No 59 0.34 No 0 0 No -35 0.85 Yes 26 82.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29115217 - NM_001005735 CHEK2 0 . . . 6.67 82.65 23 5.39 No 53 0.27 No 0 0 No -22 0.55 No 33 54.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68509020 + NM_133509 RAD51B 0 . . . 3.58 71.03 27 5.27 No 0 0.58 No 0 0 No -26 0.67 Yes 36 76.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21982014 - NM_000077 CDKN2A 0 . . . 2.83 68.66 21 4.52 No 50 0.63 No 0 0 No -20 0.78 Yes 37 74.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41274818 - NM_007294 BRCA1 0 . . . 2.47 65.45 24 5.27 No 21 1.58 Yes 0 0 No -21 0.36 No 37 74.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68671397 + NM_133509 RAD51B 0 . . . 2.39 69.44 19 8.72 Yes 69 -3.49 No 0 0 No -18 0.61 No 49 46.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41234156 - NM_007294 BRCA1 0 . . . 0.38 59.11 26 4.25 No 62 0.71 No 0 0 No -29 0.64 No 54 58.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190689027 + NM_000534 PMS1 0 . . . 4.71 76.1 29 5.74 Yes 68 0.91 Yes 0 0 No -43 0.28 No 41 59.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23653384 - NM_024675 PALB2 0 . . . 0.05 74.68 34 5.61 Yes 54 0.83 Yes 0 0 No -23 0.66 No 36 43.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68646931 + NM_133509 RAD51B 0 . . . 3.74 69.35 24 3.69 No 66 1.32 Yes 0 0 No -21 0.74 Yes 49 68.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1206622 + NM_000455 STK11 0 . . . 5.49 71.38 15 4.24 No 5 2.17 Yes 0 0 No -28 0.73 Yes 47 56.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69114121 + NM_133509 RAD51B 0 . . . 5.56 77.39 56 7.34 Yes 62 0.93 Yes 0 0 No -28 0.74 Yes 41 65.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23648831 - NM_024675 PALB2 0 . . . 1.99 75.18 17 4.8 No 33 0.91 Yes 0 0 No -24 0.84 Yes 21 63.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69100363 + NM_133509 RAD51B 0 . . . 5.35 67.03 18 5.9 Yes 51 -0.48 No 0 0 No -28 0.81 Yes 35 81.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69029508 + NM_133509 RAD51B 0 . . . 0.81 0 17 5.65 Yes 51 0.01 No 0 0 No -25 0.41 No 51 27.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68650872 + NM_133509 RAD51B 0 . . . 3.29 75.54 22 4.56 No 51 -2.39 No 0 0 No -21 0.81 Yes 45 86.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68538420 + NM_133509 RAD51B 0 . . . 6.58 88.17 9 3.87 No 71 0.72 No 0 0 No -28 0.34 No 43 80.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52433818 - NM_004656 BAP1 0 . . . 0.16 0 30 5.97 Yes 56 -2.52 No 0 0 No -30 0.61 No 20 36.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215657364 - NM_000465 BARD1 0 . . . 0.1 0 15 4.58 No 65 0.59 No 0 0 No -41 0.6 No 52 88.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59821223 - NM_032043 BRIP1 0 . . . 2.54 64.27 31 5.88 Yes 9 0.42 No 0 0 No -30 0.56 No 43 69.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37066250 + NM_000249 MLH1 0 . . . 5.21 77.41 21 6.47 Yes 25 1.51 Yes 0 0 No -20 0.5 No 33 96.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40996227 + NM_001164269 RAD51 0 . . . 2.66 0 40 6.76 Yes 40 0.96 Yes 0 0 No -39 0.47 No 42 72.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68525537 + NM_133509 RAD51B 0 . . . 4.08 66.9 25 4.81 No 57 -4.25 No 0 0 No -24 0.66 No 51 61.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190707163 + NM_000534 PMS1 0 . . . 3.21 75.2 9 3.87 No 30 0.86 Yes 0 0 No -23 0.57 No 28 59.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32921228 + NM_000059 BRCA2 0 . . . 5.79 80.34 32 4.8 No 21 0.62 No 0 0 No -32 0.32 No 42 58.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68644922 + NM_133509 RAD51B 0 . . . 0.86 54.36 28 8.68 Yes 62 0.9 Yes 0 0 No -27 0.76 Yes 47 63.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108198311 + NM_000051 ATM 0 . . . 5.13 70.97 24 5.06 No 14 1.49 Yes 0 0 No -23 0.5 No 44 74.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68731597 + NM_133509 RAD51B 0 . . . 2.9 74.47 21 4.69 No 48 0.8 Yes 0 0 No -20 0.86 Yes 22 71.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68749459 + NM_133509 RAD51B 0 . . . 7.29 88.27 46 6.67 Yes 40 1.58 Yes 0 0 No -24 0.65 No 40 86.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21978082 - NM_000077 CDKN2A 0 . . . 5.36 77.13 28 4.69 No 52 1.88 Yes 0 0 No -27 0.41 No 42 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59797758 - NM_032043 BRIP1 0 . . . 9.76 84.77 10 4 No 9 0.3 No 0 0 No -30 0.64 No 49 88.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68844068 + NM_004360 CDH1 0 . . . 8.92 88.88 20 5.1 No 69 -1.45 No 26 0.87 Yes -19 0.78 Yes 51 72.32 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr10 89691006 + NM_000314 PTEN 0 . . . 11.91 83.74 32 6.41 Yes 8 0.42 No 0 0 No -31 0.59 No 50 41.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68308783 + NM_133509 RAD51B 0 . . . 5.76 77.57 34 7.57 Yes 62 0.85 Yes 0 0 No -33 0.66 No 39 91.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68697747 + NM_133509 RAD51B 0 . . . 1.19 0 35 6.52 Yes 49 0.36 No 0 0 No -34 0.49 No 38 30.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68445107 + NM_133509 RAD51B 0 . . . 2.55 73.68 15 6.24 Yes 1 1.24 Yes 0 0 No -20 0.7 Yes 49 32.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41265430 - NM_007294 BRCA1 0 . . . 1.13 73.64 23 5.39 No 45 -3.78 No 0 0 No -25 0.52 No 43 61.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190719263 + NM_000534 PMS1 0 . . . 1.32 71.96 27 4.69 No 43 1.26 Yes 0 0 No -26 0.88 Yes 48 71.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68972252 + NM_133509 RAD51B 0 . . . 4.09 63.48 22 5.02 No 28 0.69 No 0 0 No -57 0.61 No 47 67.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68410715 + NM_133509 RAD51B 0 . . . 7.78 87.85 34 6.02 Yes -2 0.78 Yes 0 0 No -31 0.49 No 43 72.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215591676 - NM_000465 BARD1 0 . . . 10.45 84.1 29 5.57 Yes 11 0.47 No 0 0 No -24 0.55 No 46 63.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59768439 - NM_032043 BRIP1 0 . . . 6.73 77.21 51 6.99 Yes 26 2.01 Yes 0 0 No -32 0.66 No 32 88.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68772669 + NM_004360 CDH1 0 . . . 4.92 85.68 25 5.57 Yes 71 0.13 No 0 0 No -24 0.72 Yes 49 67.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68784171 + NM_133509 RAD51B 0 . . . 0.21 67.45 19 4.9 No 71 0.1 No 0 0 No -18 0.56 No 44 59.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94165348 - NM_005591 MRE11 0 . . . 3.95 87.25 23 4.8 No 13 0.72 No 0 0 No -22 0.44 No 45 98.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94187754 - NM_005591 MRE11 0 . . . 2.15 0 34 8.68 Yes -3 0.53 No 0 0 No -33 0.61 No 43 67.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59828647 - NM_032043 BRIP1 0 . . . 4.44 74.04 56 5.5 No 15 2.13 Yes 0 0 No -35 0.88 Yes 43 88.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190715482 + NM_000534 PMS1 0 . . . 0.12 69.58 13 4.12 No 51 -4.24 No 0 0 No -30 0.5 No 51 34.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69044169 + NM_133509 RAD51B 0 . . . 0.55 0 23 5.39 No 35 1.04 Yes 0 0 No -30 0.75 Yes 23 65.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68359412 + NM_133509 RAD51B 0 . . . 0.24 65.87 16 4.69 No 27 0.09 No 0 0 No -18 0.31 No 43 50.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68432521 + NM_133509 RAD51B 0 . . . 5.03 82.28 15 4 No 8 1.4 Yes 0 0 No -29 0.81 Yes 50 92.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68450284 + NM_133509 RAD51B 0 . . . 3.29 72.45 30 6.78 Yes 64 -3.17 No 0 0 No -29 0.8 Yes 47 95.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47730323 + NM_000251 MSH2 0 . . . 1.14 73.77 21 4.78 No 35 0.21 No 0 0 No -20 0.74 Yes 41 47.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89707576 + NM_000314 PTEN 0 . . . 0.46 84.6 11 4.12 No 16 0.23 No 0 0 No -49 0.57 No 42 65.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56771279 + NM_058216 RAD51C 0 . . . 6.37 81.48 16 4.69 No 18 1.11 Yes 0 0 No -19 0.55 No 40 57.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23631771 - NM_024675 PALB2 0 . . . 0.5 0 36 5.99 Yes 38 -2.5 No 0 0 No -28 0.51 No 43 55.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89702290 + NM_000314 PTEN 0 . . . 0.85 61.43 23 4.41 No 21 0.31 No 0 0 No -22 0.48 No 44 47.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215589972 - NM_000465 BARD1 0 . . . 7.66 86.05 11 5 No 4 0.52 No 0 0 No -53 0.36 No 50 63.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215648032 - NM_000465 BARD1 0 . . . 2.48 65.77 30 5.71 Yes 12 0.28 No 0 0 No -29 0.76 Yes 39 66.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29103423 - NM_001005735 CHEK2 0 . . . 4.62 80.12 26 5.25 No 67 0.51 No 0 0 No -23 0.6 No 45 62.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68802289 + NM_004360 CDH1 0 . . . 1.12 0 16 3.83 No 48 -3 No 0 0 No -19 0.94 Yes 20 13.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89634300 + NM_000314 PTEN 0 . . . 8.45 78.04 29 6.45 Yes 17 0.78 Yes 0 0 No -28 0.7 Yes 40 65.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68570982 + NM_133509 RAD51B 0 . . . 1.65 74.72 24 5.41 No 16 -2.9 No 0 0 No -27 0.51 No 50 69.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45793760 - NM_001048171 MUTYH 0 . . . 4.75 74.53 19 4.98 No 18 0.39 No 0 0 No -45 0.55 No 44 48.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215599299 - NM_000465 BARD1 0 . . . 4.65 74.02 18 4.75 No 52 -5.27 No 0 0 No -21 0.85 Yes 46 86.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105185358 + NM_021930 RINT1 0 . . . 4.04 0 10 5.1 No 46 1.13 Yes 0 0 No -19 0.37 No 37 45.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41238868 - NM_007294 BRCA1 0 . . . 6.78 89.16 21 5.02 No 37 0.97 Yes 0 0 No -45 0.47 No 47 92.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21971600 - NM_000077 CDKN2A 0 . . . 3.62 74.48 51 5.71 Yes 75 0.66 No 0 0 No -32 0.74 Yes 38 82.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68468919 + NM_133509 RAD51B 0 . . . 4.59 73.2 24 2.97 No 44 0.98 Yes 0 0 No -21 0.49 No 38 64.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68596850 + NM_133509 RAD51B 0 . . . 0.49 0 34 7.71 Yes 47 0.57 No 0 0 No -33 0.74 Yes 39 74.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68640325 + NM_133509 RAD51B 0 . . . 1.85 71.39 49 7.64 Yes 71 0.96 Yes 0 0 No -22 0.21 No 50 59.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215609060 - NM_000465 BARD1 0 . . . 0.91 79.58 16 5.2 No 20 1.17 Yes 0 0 No -29 0.39 No 38 46.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41254420 - NM_007294 BRCA1 0 . . . 1.27 76.63 11 5 No 58 -4.24 No 0 0 No -44 0.5 No 43 46.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68859617 + NM_133509 RAD51B 0 . . . 3.95 78.72 23 5.3 No 29 -1.42 No 0 0 No -22 0.9 Yes 16 28.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131903628 + NM_005732 RAD50 0 . . . 2.45 77.73 25 5.41 No 49 0.01 No 0 0 No -24 0.76 Yes 47 72.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6022690 - NM_000535 PMS2 0 . . . 8.36 93.23 10 4.8 No 6 1.12 Yes 0 0 No -21 0.43 No 44 75.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108096599 + NM_000051 ATM 0 . . . 4.77 72.75 33 4.42 No 41 0.34 No 0 0 No -28 0.78 Yes 43 88.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68817351 + NM_004360 CDH1 0 . . . 3.72 72.57 27 5.2 No 60 -2.45 No 0 0 No -26 0.56 No 47 9.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108175281 + NM_000051 ATM 0 . . . 0.64 0 13 4.16 No 37 1.18 Yes 0 0 No -21 0.46 No 21 94.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29092889 - NM_001005735 CHEK2 0 . . . 2.24 77.43 17 5.39 No 44 0.4 No 0 0 No -24 0.64 No 47 59.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68835426 + NM_133509 RAD51B 0 . . . 4.15 75.19 22 5.29 No 12 -0.98 No 0 0 No -21 0.74 Yes 46 90.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108110523 + NM_000051 ATM 0 . . . 6.82 72.62 21 5.74 Yes 32 0.65 No 0 0 No -26 0.63 No 48 71.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1205435 + NM_000455 STK11 0 . . . 5.6 79.42 28 5.2 No 10 0.89 Yes 0 0 No -27 0.93 Yes 48 84.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68489652 + NM_133509 RAD51B 0 . . . 5.2 76.1 25 5.33 No -2 0.69 No 0 0 No -24 0.61 No 36 76.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68823345 + NM_133509 RAD51B 0 . . . 0.63 0 16 4.06 No 12 0.25 No 0 0 No -15 0.34 No 60 39.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56784146 + NM_058216 RAD51C 0 . . . 4.54 68.26 18 4.47 No 14 1.34 Yes 0 0 No -21 0.81 Yes 44 94.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847421 + NM_133509 RAD51B 0 . . . 1.18 71.72 24 4.94 No 20 0.08 No 0 0 No -23 0.74 Yes 38 91.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59917773 - NM_032043 BRIP1 0 . . . 0.27 75.76 31 7.34 Yes 30 0.89 Yes 0 0 No -30 0.84 Yes 49 65.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48021026 + NM_000179 MSH6 0 . . . 2.61 74.82 29 6.74 Yes 71 0.98 Yes 0 0 No -28 0.43 No 49 48.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215605170 - NM_000465 BARD1 0 . . . 1.64 0 32 5.56 Yes 24 0.32 No 0 0 No -24 0.78 Yes 51 69.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68342562 + NM_133509 RAD51B 0 . . . 1.44 73.2 15 5.2 No -3 0.43 No 0 0 No -45 0.32 No 55 49.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59768706 - NM_032043 BRIP1 0 . . . 5.6 86.13 23 5.3 No 57 0.59 No 0 0 No -22 0.63 No 48 81.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94201871 - NM_005591 MRE11 0 . . . 1.9 70.22 22 5.29 No 16 -1.8 No 0 0 No -22 0.74 Yes 49 70.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68802213 + NM_004360 CDH1 0 . . . 6.28 84.95 22 4.76 No 3 0.97 Yes 0 0 No -21 0.92 Yes 49 83.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84395066 - NM_139076 FAM175A 0 . . . 1.65 71.27 20 5.1 No -4 1.33 Yes 0 0 No -19 0.62 No 53 43.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68623890 + NM_133509 RAD51B 0 . . . 0.44 0 36 4.95 No 63 -4.27 No 0 0 No -35 0.46 No 39 42.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47728890 + NM_000251 MSH2 0 . . . 2.55 68.36 60 7.83 Yes 75 -1.72 No 0 0 No -24 0.66 Yes 53 51.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108117605 + NM_000051 ATM 0 . . . 4.63 69.61 12 4.69 No 0 1.15 Yes 0 0 No -46 0.41 No 58 63.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90982313 - NM_002485 NBN 0 . . . 3.48 84.24 42 6.93 Yes 4 1.04 Yes 0 0 No -41 0.73 Yes 45 56.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68328514 + NM_133509 RAD51B 0 . . . 5.67 83.11 28 6.15 Yes 4 1.35 Yes 0 0 No -27 0.84 Yes 46 50.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84401177 - NM_139076 FAM175A 0 . . . 5.32 72.31 21 3.95 No 0 0.25 No 0 0 No -27 0.83 Yes 44 83.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89626398 + NM_000314 PTEN 0 . . . 5.8 86.85 30 6.69 Yes 30 0.78 Yes 27 0.77 Yes -30 0.33 No 28 49.84 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 37056767 + NM_000249 MLH1 0 . . . 8.54 85.77 19 5.04 No 44 1.04 Yes 0 0 No -18 0.51 No 42 48.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68869074 + NM_133509 RAD51B 0 . . . 4.65 0 31 4.65 No 14 1.2 Yes 0 0 No -30 0.52 No 44 86.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68672682 + NM_133509 RAD51B 0 . . . 0.41 0 22 3.78 No 28 1.25 Yes 0 0 No -20 0.63 No 30 49.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68962218 + NM_133509 RAD51B 0 . . . 7.13 89.42 23 5.2 No 33 -3.01 No 0 0 No -23 0.28 No 47 52.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23630548 - NM_024675 PALB2 0 . . . 0.01 68.55 13 4.36 No -3 0.12 No 0 0 No -30 0.75 Yes 10 22.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75498304 - NM_001040108 MLH3 0 . . . 3.3 74.66 22 6.5 Yes 53 1.1 Yes 0 0 No -21 0.94 Yes 46 62.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75486656 - NM_001040108 MLH3 0 . . . 7.88 79.64 28 7.89 Yes 36 0.95 Yes 0 0 No -27 0.9 Yes 46 60.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105177696 + NM_021930 RINT1 0 . . . 1.33 76.85 16 3.67 No 33 1.13 Yes 0 0 No -25 0.64 No 50 39.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108207100 + NM_000051 ATM 0 . . . 6.11 87.14 20 4.9 No 54 -2.28 No 0 0 No -28 0.27 No 53 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21966727 - NM_000077 CDKN2A 0 . . . 2.85 64.09 18 4.7 No 28 0.31 No 0 0 No -40 0.65 No 34 71.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190663413 + NM_000534 PMS1 0 . . . 0.81 75.5 23 5.53 No -2 0.36 No 0 0 No -40 0.83 Yes 45 83.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48035712 + NM_000179 MSH6 0 . . . 1.28 73.14 13 4.14 No 54 1.27 Yes 0 0 No -20 0.42 No 59 72.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68718983 + NM_133509 RAD51B 0 . . . 3.96 83.53 23 5.83 Yes 15 1.24 Yes 0 0 No -22 0.85 Yes 43 90.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89690650 + NM_000314 PTEN 0 . . . 2.26 75.89 22 4.99 No 63 0.96 Yes 0 0 No -21 0.87 Yes 52 69.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47780956 + NM_000251 MSH2 0 . . . 2.76 77.92 28 5.66 Yes 17 1.12 Yes 0 0 No -27 0.56 No 41 63.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47753758 + NM_000251 MSH2 0 . . . 0.31 77.27 27 5.1 No 42 -3.78 No 0 0 No -26 0.69 Yes 51 70.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45793838 - NM_001048171 MUTYH 0 . . . 5 72.62 19 4.55 No 21 1.4 Yes 0 0 No -19 0.47 No 37 46.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47664777 + NM_000251 MSH2 0 . . . 0.55 66.8 28 6.79 Yes 34 0.43 No 0 0 No -27 0.77 Yes 40 20.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37074765 + NM_000249 MLH1 0 . . . 3.56 78.94 18 4.9 No 42 2 Yes 0 0 No -47 0.83 Yes 34 78.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94172499 - NM_005591 MRE11 0 . . . 1.52 72.4 39 6.72 Yes -2 0.94 Yes 0 0 No -41 0.74 Yes 48 62.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68835200 + NM_004360 CDH1 0 . . . 6.5 85.02 48 7.02 Yes 8 1.33 Yes 0 0 No -26 0.65 No 40 70.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68835732 + NM_004360 CDH1 0 . . . 5.61 80.33 27 6.14 Yes 34 0.95 Yes 0 0 No -26 0.41 No 28 65.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90946390 - NM_002485 NBN 0 . . . 0.26 63.64 18 7.48 Yes 70 -7.05 No 0 0 No -27 0.54 No 45 56.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105203960 + NM_021930 RINT1 0 . . . 5.17 85.02 35 5.89 Yes 67 1.11 Yes 0 0 No -34 0.81 Yes 43 63.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56808639 + NM_058216 RAD51C 0 . . . 4.74 84.41 23 5.2 No 22 0.21 No 0 0 No -22 0.65 No 42 90.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108212964 + NM_000051 ATM 0 . . . 0.22 64.33 21 5.2 No -4 0.17 No 0 0 No -25 0.37 No 44 28.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6047321 - NM_000535 PMS2 0 . . . 0.89 80.91 23 5.38 No 74 -4.21 No 0 0 No -22 0.48 No 47 63.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68843206 + NM_004360 CDH1 0 . . . 0.34 68.14 17 4.78 No 36 0.72 No 0 0 No -34 0.59 No 47 51.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68555659 + NM_133509 RAD51B 0 . . . 5.43 72.14 17 5.09 No 17 0.94 Yes 0 0 No -26 0.46 No 41 92.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108092275 + NM_000051 ATM 0 . . . 5.5 81.62 16 5.48 No 47 1.16 Yes 0 0 No -15 0.52 No 50 27.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59885543 - NM_032043 BRIP1 0 . . . 1.17 54.7 18 4.7 No 46 0.4 No 0 0 No -49 0.56 No 36 88.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29115660 - NM_001005735 CHEK2 0 . . . 6.29 86.89 23 5 No 8 0.76 No 0 0 No -20 0.81 Yes 50 74.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69017274 + NM_133509 RAD51B 0 . . . 7.24 78.95 15 5.28 No 64 -2.09 No 0 0 No -21 0.69 Yes 47 34.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215650852 - NM_000465 BARD1 0 . . . 5.23 80.83 19 5.71 Yes 33 0.81 Yes 0 0 No -16 0.51 No 47 51.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68507551 + NM_133509 RAD51B 0 . . . 0.94 72.85 21 5.17 No 47 0.29 No 0 0 No -20 0.58 No 49 76.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215630833 - NM_000465 BARD1 0 . . . 5.9 76.17 19 6.02 Yes 13 1.08 Yes 0 0 No -31 0.67 Yes 44 68.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68995934 + NM_133509 RAD51B 0 . . . 2.1 83.14 46 7.21 Yes 21 1.06 Yes 0 0 No -45 0.68 Yes 37 83.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68378512 + NM_133509 RAD51B 0 . . . 7.13 79.27 32 7.4 Yes 54 -3.62 No 0 0 No -31 0.78 Yes 46 70.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68987025 + NM_133509 RAD51B 0 . . . 0.18 57.84 58 7.79 Yes 39 0.62 No 0 0 No -43 0.18 No 47 22.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68466428 + NM_133509 RAD51B 0 . . . 1.46 69.98 15 4.58 No 26 0.07 No 0 0 No -40 0.51 No 44 25.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56790213 + NM_058216 RAD51C 0 . . . 1.51 76.78 21 4.77 No 76 -2.09 No 0 0 No -20 0.5 No 53 20.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37079909 + NM_000249 MLH1 0 . . . 3.71 71.77 44 9.65 Yes 22 0.58 No 0 0 No -43 0.62 No 52 51.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131957212 + NM_005732 RAD50 0 . . . 12.43 82.54 22 5.91 Yes 25 0.73 No 0 0 No -21 0.71 Yes 33 86.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104165826 - NM_001100119 XRCC3 0 . . . 0.3 68 24 4.72 No 55 -0.91 No 0 0 No -23 0.45 No 54 54.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59879098 - NM_032043 BRIP1 0 . . . 1 61.93 25 5.08 No 31 -3.72 No 0 0 No -28 0.64 No 53 55.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89650591 + NM_000314 PTEN 0 . . . 2.29 83.16 22 7.28 Yes 3 0.34 No 0 0 No -21 0.88 Yes 50 91.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108147647 + NM_000051 ATM 0 . . . 6.12 89 25 6.24 Yes 65 -1.62 No 0 0 No -24 0.68 Yes 49 69.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108125360 + NM_000051 ATM 0 . . . 6.08 70.48 50 7.47 Yes 1 2.35 Yes 0 0 No -33 0.53 No 39 64.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48010300 + NM_000179 MSH6 0 . . . 3.05 88.63 16 4.68 No 52 -1.34 No 0 0 No -37 0.82 Yes 38 20.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108197492 + NM_000051 ATM 0 . . . 2.95 0 16 5.44 No 67 0.2 No 0 0 No -26 0.38 No 43 28.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29127090 - NM_001005735 CHEK2 0 . . . 2.02 85.83 68 6.09 Yes 76 1.32 Yes 0 0 No -25 0.78 Yes 50 83.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59797495 - NM_032043 BRIP1 0 . . . 2.09 69.91 63 10.1 Yes 14 1.4 Yes 0 0 No -32 0.46 No 43 73.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68886351 + NM_133509 RAD51B 0 . . . 7.73 84.26 47 8.04 Yes 46 1 Yes 0 0 No -46 0.66 No 50 47.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47766510 + NM_000251 MSH2 0 . . . 6.33 67.66 35 6.16 Yes 18 0.33 No 0 0 No -35 0.62 No 40 59.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68733785 + NM_133509 RAD51B 0 . . . 5.42 74.05 19 4.69 No 60 -3.89 No 0 0 No -18 0.89 Yes 48 45.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108241431 + NM_000051 ATM 0 . . . 4.15 0 33 7.84 Yes 60 0.93 Yes 0 0 No -31 0.53 No 24 48.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41276408 - NM_007294 BRCA1 0 . . . 2.94 70.04 23 3.36 No 66 0.64 No 0 0 No -22 0.81 Yes 45 81.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90993715 - NM_002485 NBN 0 . . . 3.09 63.75 10 4.9 No -2 0.2 No 0 0 No -52 0.4 No 60 27.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215655317 - NM_000465 BARD1 0 . . . 1.71 68.77 29 6.48 Yes 50 1 Yes 0 0 No -28 0.78 Yes 53 26.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69029771 + NM_133509 RAD51B 0 . . . 4.86 69.88 25 5.56 Yes 7 1.46 Yes 0 0 No -24 0.83 Yes 51 59.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47653547 + NM_000251 MSH2 0 . . . 2.08 0 65 7.9 Yes 28 0.83 Yes 0 0 No -32 0.55 No 43 69.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68594457 + NM_133509 RAD51B 0 . . . 5.49 74.78 34 8.18 Yes 62 1.52 Yes 0 0 No -33 0.67 Yes 26 53.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68608918 + NM_133509 RAD51B 0 . . . 0.2 62.12 25 6 Yes 70 0.7 No 0 0 No -24 0.94 Yes 53 55.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90985048 - NM_002485 NBN 0 . . . 3.03 69.13 28 8.88 Yes 37 0.98 Yes 0 0 No -27 0.78 Yes 43 58.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69130218 + NM_133509 RAD51B 0 . . . 8.71 93.49 26 5.73 Yes 46 1.25 Yes 0 0 No -25 0.65 No 47 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23632877 - NM_024675 PALB2 0 . . . 0.81 85.36 28 5.48 No 75 0.3 No 0 0 No -27 0.6 No 49 58.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1226929 + NM_000455 STK11 0 . . . 1.28 0 14 4.42 No 3 1.01 Yes 0 0 No -19 0.8 Yes 55 84.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108195959 + NM_000051 ATM 0 . . . 0.33 68.41 10 4.9 No 9 -2.29 No 0 0 No -17 0.27 No 32 86.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41258399 - NM_007294 BRCA1 0 . . . 1.64 65.7 24 4.1 No 75 -3.95 No 0 0 No -23 0.49 No 56 28.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68992862 + NM_133509 RAD51B 0 . . . 6.21 72.76 43 6.66 Yes 69 0.7 No 0 0 No -24 0.67 Yes 45 94.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68323273 + NM_133509 RAD51B 0 . . . 6.51 81.64 22 4.8 No -1 0.7 No 0 0 No -27 0.48 No 35 62.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108240869 + NM_000051 ATM 0 . . . 6 0 13 4.72 No 22 0.77 Yes 0 0 No -22 0.55 No 50 72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68906895 + NM_133509 RAD51B 0 . . . 1.71 68.33 27 6.43 Yes 65 1.6 Yes 0 0 No -26 0.78 Yes 47 63.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94206844 - NM_005591 MRE11 0 . . . 3.43 64.42 29 5.39 No 7 0.85 Yes 0 0 No -28 0.78 Yes 51 58.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47793792 + NM_000251 MSH2 0 . . . 4.34 68.27 16 5.92 Yes 28 0.81 Yes 0 0 No -30 0.44 No 47 61.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59788024 - NM_032043 BRIP1 0 . . . 7.7 78.4 9 5.29 No 23 1.51 Yes 0 0 No -26 0.37 No 35 51.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108233128 + NM_000051 ATM 0 . . . 4.51 79.66 19 5.83 Yes 51 -4.28 No 0 0 No -18 0.88 Yes 52 54.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32954889 + NM_000059 BRCA2 0 . . . 4.45 75.25 29 6.4 Yes 19 -3.36 No 0 0 No -26 0.8 Yes 14 54.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68698326 + NM_133509 RAD51B 0 . . . 0.41 64.07 18 5.25 No 1 -0.87 No 0 0 No -22 0.64 No 47 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108106574 + NM_000051 ATM 0 . . . 3.64 76.81 29 5 No 59 0.41 No 0 0 No -23 0.68 Yes 45 52.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68790968 + NM_004360 CDH1 0 . . . 5.65 82.89 21 5.04 No 71 0.44 No 0 0 No -20 0.85 Yes 43 59.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68341259 + NM_133509 RAD51B 0 . . . 1.62 64 11 4 No 11 -2.42 No 0 0 No -35 0.72 Yes 47 38.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6044582 - NM_000535 PMS2 0 . . . 1.02 76.63 20 4.97 No 67 -4.99 No 0 0 No -23 0.9 Yes 43 53.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84399701 - NM_139076 FAM175A 0 . . . 9.3 93.6 17 5.14 No 71 1.46 Yes 0 0 No -28 0.57 No 47 70.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6049675 - NM_000535 PMS2 0 . . . 1.15 0 24 5.98 Yes 13 0.94 Yes 0 0 No -23 0.74 Yes 25 62.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68896222 + NM_133509 RAD51B 0 . . . 2.94 74.81 46 5.95 Yes 67 1.68 Yes 0 0 No -27 0.67 Yes 35 94.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47806112 + NM_000251 MSH2 0 . . . 2.79 71.24 21 4.69 No 74 -2.15 No 0 0 No -20 0.96 Yes 44 72.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6029431 - NM_000535 PMS2 0 . . . 3.57 68.98 30 5.56 Yes 68 -6.35 No 0 0 No -29 0.51 No 49 57.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68669222 + NM_133509 RAD51B 0 . . . 3.95 72.89 10 5.66 Yes 21 1.24 Yes 0 0 No -28 0.62 No 37 48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32955387 + NM_000059 BRCA2 0 . . . 0.66 64.42 20 5.48 No 45 0.06 No 0 0 No -17 0.62 No 51 40.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68611387 + NM_133509 RAD51B 0 . . . 4.81 76.92 29 5.85 Yes 42 1.44 Yes 0 0 No -28 0.72 Yes 45 77.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108129287 + NM_000051 ATM 0 . . . 2.91 82.58 20 5.68 Yes 11 0.8 Yes 0 0 No -26 0.71 Yes 37 66.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59934463 - NM_032043 BRIP1 0 . . . 0.78 67.93 29 5.18 No 69 -4.96 No 0 0 No -28 0.58 No 49 81.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41198877 - NM_007294 BRCA1 0 . . . 1 78.09 13 4.36 No 49 0.14 No 0 0 No -17 0.59 No 44 81.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68567647 + NM_133509 RAD51B 0 . . . 0.09 70.6 20 5.09 No 52 1.25 Yes 0 0 No -30 0.6 No 51 26.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68898144 + NM_133509 RAD51B 0 . . . 7.13 81.54 21 5.11 No 7 0.84 Yes 0 0 No -27 0.54 No 51 74.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68656567 + NM_133509 RAD51B 0 . . . 2.24 80.12 16 5.48 No 7 1.21 Yes 0 0 No -23 0.33 No 51 76.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69047747 + NM_133509 RAD51B 0 . . . 0.61 69.19 22 4.78 No 72 0.75 No 0 0 No -33 0.37 No 38 71.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190719927 + NM_000534 PMS1 0 . . . 2.88 66.32 16 5.39 No 5 0.82 Yes 0 0 No -27 0.37 No 33 83.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90984245 - NM_002485 NBN 0 . . . 2.71 81.74 25 5.57 Yes 2 0.58 No 0 0 No -24 0.61 No 45 47.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68657065 + NM_133509 RAD51B 0 . . . 8.06 82.85 29 4.17 No 15 0.84 Yes 0 0 No -28 0.45 No 43 48.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7575001 - NM_000546 TP53 0 . . . 0.41 68.62 38 6.07 Yes 59 1.27 Yes 0 0 No -28 0.53 No 40 83.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68586088 + NM_133509 RAD51B 0 . . . 4.2 76.15 20 5.61 Yes 65 0.09 No 0 0 No -22 0.87 Yes 13 46.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23620712 - NM_024675 PALB2 0 . . . 0.89 0 32 5.84 Yes 9 1.54 Yes 0 0 No -26 0.54 No 49 49.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47716988 + NM_000251 MSH2 0 . . . 3.79 67.88 35 6.16 Yes 26 2.04 Yes 0 0 No -34 0.38 No 21 55.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23631232 - NM_024675 PALB2 0 . . . 2.09 76.91 15 5.56 Yes 36 -2.59 No 0 0 No -24 0.39 No 54 60.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41015601 + NM_001164269 RAD51 0 . . . 2.07 67.81 31 5.67 Yes -2 0.84 Yes 0 0 No -30 0.64 No 42 85.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84382781 - NM_139076 FAM175A 0 . . . 1.98 72.9 22 4.58 No 9 0.6 No 0 0 No -18 0.48 No 39 62.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68441084 + NM_133509 RAD51B 0 . . . 3.79 76.03 19 3.67 No 71 0.47 No 0 0 No -38 0.75 Yes 41 47.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131961167 + NM_005732 RAD50 0 . . . 3.68 87.46 25 5.38 No 39 -1.69 No 0 0 No -31 0.6 No 42 35.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68751169 + NM_133509 RAD51B 0 . . . 5.67 77.09 27 5.48 No 42 0.66 No 0 0 No -26 0.76 Yes 33 70.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32971582 + NM_000059 BRCA2 0 . . . 0.45 70.91 18 4.88 No 0 0.26 No 0 0 No -21 0.6 No 49 54.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68459434 + NM_133509 RAD51B 0 . . . 0.79 72.85 28 4.25 No 4 0.72 No 0 0 No -27 0.62 No 43 90.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68727864 + NM_133509 RAD51B 0 . . . 6.33 75.66 20 5.1 No 36 0.39 No 0 0 No -19 0.59 No 44 87.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32924638 + NM_000059 BRCA2 0 . . . 0.36 74.68 43 6.71 Yes 24 0.13 No 0 0 No -42 0.88 Yes 34 77.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40999213 + NM_001164269 RAD51 0 . . . 3.8 0 61 7.68 Yes 14 1.52 Yes 0 0 No -24 0.82 Yes 44 72.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68734917 + NM_133509 RAD51B 0 . . . 2.96 79.84 27 5.84 Yes -2 0.51 No 0 0 No -26 0.93 Yes 51 66.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131932078 + NM_005732 RAD50 0 . . . 2.07 66.85 141 12.42 Yes 76 0.84 Yes 0 0 No -43 0.89 Yes 19 92.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68905999 + NM_133509 RAD51B 0 . . . 8.74 74.77 28 5.56 Yes 31 1.21 Yes 0 0 No -27 0.89 Yes 27 67.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68772028 + NM_004360 CDH1 0 . . . 3.85 69.43 29 7.21 Yes 35 0.85 Yes 0 0 No -28 0.86 Yes 23 62.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69078847 + NM_133509 RAD51B 0 . . . 1.03 83.18 37 5.63 Yes 49 -4.33 No 0 0 No -37 0.43 No 54 63.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68835211 + NM_133509 RAD51B 0 . . . 9.88 94.58 12 4.22 No 38 1.04 Yes 0 0 No -24 0.36 No 39 38.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68806037 + NM_133509 RAD51B 0 . . . 6.18 81.07 20 4.9 No 2 0.78 Yes 0 0 No -19 0.71 Yes 40 76.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41008159 + NM_001164269 RAD51 0 . . . 2.37 0 13 4.63 No 66 0.96 Yes 0 0 No -29 0.43 No 17 33.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84390366 - NM_139076 FAM175A 0 . . . 0.8 78.79 48 6.63 Yes 73 0.51 No 0 0 No -29 0.39 No 52 38.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59926812 - NM_032043 BRIP1 0 . . . 2.88 75.86 26 6.18 Yes 64 -4.92 No 0 0 No -25 0.69 Yes 46 40.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68804080 + NM_133509 RAD51B 0 . . . 3.75 74.44 9 3.87 No 2 0.49 No 0 0 No -43 0.74 Yes 42 51.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90981310 - NM_002485 NBN 0 . . . 0.08 73.62 12 4.99 No 75 1.26 Yes 0 0 No -28 0.4 No 51 24.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68418771 + NM_133509 RAD51B 0 . . . 2.58 81.15 31 5.2 No 3 1.05 Yes 0 0 No -30 0.54 No 55 51.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68568411 + NM_133509 RAD51B 0 . . . 4.8 0 24 5.1 No 23 -0.81 No 0 0 No -23 0.89 Yes 44 69.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68813210 + NM_004360 CDH1 0 . . . 7.24 83.11 14 4.95 No 24 1.75 Yes 0 0 No -18 0.56 No 34 95.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90992532 - NM_002485 NBN 0 . . . 2.35 0 22 5.1 No 60 1.13 Yes 0 0 No -21 0.8 Yes 33 51.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68985931 + NM_133509 RAD51B 0 . . . 1.52 70.28 18 4.47 No 39 -1.74 No 0 0 No -24 0.55 No 47 55.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68489779 + NM_133509 RAD51B 0 . . . 2.28 75.34 31 6.48 Yes 67 0.86 Yes 0 0 No -27 0.82 Yes 46 74.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90967346 - NM_002485 NBN 0 . . . 7.72 77.72 17 5.92 Yes 2 1.67 Yes 0 0 No -21 0.79 Yes 43 93.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68988443 + NM_133509 RAD51B 0 . . . 8.85 85.05 21 5.16 No 40 0.28 No 0 0 No -20 0.68 Yes 46 84.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68442516 + NM_133509 RAD51B 0 . . . 8.76 72.69 15 5.47 No 2 0.18 No 0 0 No -25 0.5 No 47 91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29126682 - NM_001005735 CHEK2 0 . . . 3.6 85.02 20 5.74 Yes 4 1.2 Yes 0 0 No -19 0.56 No 35 57.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68673308 + NM_133509 RAD51B 0 . . . 5.35 87.72 33 7.92 Yes 73 0.67 No 0 0 No -32 0.94 Yes 47 67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131929711 + NM_005732 RAD50 0 . . . 4.25 74.77 15 5.29 No 58 -4.84 No 0 0 No -49 0.62 No 46 53.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84397188 - NM_139076 FAM175A 0 . . . 3.44 79.57 25 4.88 No 69 1.57 Yes 0 0 No -24 0.55 No 52 75.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47735141 + NM_000251 MSH2 0 . . . 6.82 76.54 12 4.39 No NA NA NA 0 0 No -20 0.63 No 37 61.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108212678 + NM_000051 ATM 0 . . . 3.04 79.07 30 5.19 No 17 0.68 No 0 0 No -25 0.67 Yes 41 81.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1211829 + NM_000455 STK11 0 . . . 1 68.59 17 4.69 No 18 -1.1 No 0 0 No -39 0.43 No 40 83.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69096792 + NM_133509 RAD51B 0 . . . 0.98 83.86 9 4.62 No -3 1.13 Yes 0 0 No -25 0.82 Yes 29 90.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68551865 + NM_133509 RAD51B 0 . . . 0.84 72.4 20 4.08 No 17 1.06 Yes 0 0 No -20 0.63 No 41 92.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94207071 - NM_005591 MRE11 0 . . . 7.96 90.45 42 5.22 No 5 1.19 Yes 0 0 No -31 0.52 No 46 95.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94223457 - NM_005591 MRE11 0 . . . 0.14 63.78 32 5.31 No 58 -5.05 No 0 0 No -31 0.56 No 45 49.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108141123 + NM_000051 ATM 0 . . . 0.4 73.46 31 9.46 Yes -2 0.23 No 0 0 No -30 0.95 Yes 51 80.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59774457 - NM_032043 BRIP1 0 . . . 2.02 80.49 16 4.69 No 25 1.58 Yes 0 0 No -40 0.39 No 33 59.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131936521 + NM_005732 RAD50 0 . . . 1.61 55.34 22 4.69 No 66 -2.8 No 0 0 No -21 0.7 Yes 38 36.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33444967 - NM_002878 RAD51D 0 . . . 2.11 0 13 4.79 No -2 0.67 No 0 0 No -23 0.57 No 56 45.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21981423 - NM_000077 CDKN2A 0 . . . 1.54 0 21 4.89 No 69 0.2 No 0 0 No -20 0.77 Yes 40 74.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41260531 - NM_007294 BRCA1 0 . . . 1.63 72.33 24 5.48 No 31 1.04 Yes 0 0 No -23 0.78 Yes 27 83.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59808523 - NM_032043 BRIP1 0 . . . 1.88 66.33 22 4.69 No 35 -1.91 No 0 0 No -21 0.71 Yes 43 49.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89626206 + NM_000314 PTEN 0 . . . 4.35 69.59 48 7.01 Yes 46 0.79 Yes 0 0 No -35 0.95 Yes 38 66.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45792959 - NM_001048171 MUTYH 0 . . . 5.84 80.57 31 5.13 No 17 -0.76 No 0 0 No -23 0.72 Yes 50 16.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108126864 + NM_000051 ATM 0 . . . 4.78 69.79 25 4.9 No 15 1.16 Yes 0 0 No -46 0.69 Yes 39 58.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69057463 + NM_133509 RAD51B 0 . . . 5.62 81.41 26 5.1 No 27 1.62 Yes 0 0 No -25 0.71 Yes 31 95.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94192232 - NM_005591 MRE11 0 . . . 3.65 73.61 43 5.18 No 47 1.11 Yes 0 0 No -30 0.68 Yes 46 72.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59922803 - NM_032043 BRIP1 0 . . . 0.96 64.89 35 6.92 Yes 30 0.7 No 0 0 No -34 0.83 Yes 41 77.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68800221 + NM_133509 RAD51B 0 . . . 2.98 78.28 33 4.26 No -2 0.65 No 0 0 No -22 0.63 No 20 45.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47771459 + NM_000251 MSH2 0 . . . 0.81 0 17 4.8 No 19 1.82 Yes 0 0 No -16 0.27 No 39 40.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89652465 + NM_000314 PTEN 0 . . . 3.79 77.54 45 4.87 No 3 0.13 No 0 0 No -30 0.62 No 48 69.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190678143 + NM_000534 PMS1 0 . . . 2.2 65.3 11 5.66 Yes 43 0.34 No 0 0 No -23 0.46 No 55 53.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68841337 + NM_133509 RAD51B 0 . . . 2.46 63.9 22 5.1 No 56 0.2 No 0 0 No -27 0.52 No 33 57.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47663229 + NM_000251 MSH2 0 . . . 3.93 71.98 23 5.96 Yes 16 1.42 Yes 0 0 No -22 0.96 Yes 42 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94178125 - NM_005591 MRE11 0 . . . 0.34 62.83 17 4.8 No 49 0.74 No 0 0 No -16 0.32 No 45 25.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68782703 + NM_133509 RAD51B 0 . . . 3.64 65.9 21 4.93 No 42 0.06 No 0 0 No -20 0.89 Yes 45 62.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59832481 - NM_032043 BRIP1 0 . . . 3.62 78.72 31 4.27 No 73 2.41 Yes 0 0 No -27 0.66 No 47 65.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108220900 + NM_000051 ATM 0 . . . 3.87 73.79 14 4.9 No -3 0.04 No 0 0 No -39 0.78 Yes 42 60.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41017004 + NM_001164269 RAD51 0 . . . 0.93 68.06 19 4.58 No 41 1.31 Yes 0 0 No -18 0.81 Yes 41 93.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37057701 + NM_000249 MLH1 0 . . . 7.69 74.24 22 5.06 No 13 0.53 No 0 0 No -21 0.52 No 45 75.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68862901 + NM_133509 RAD51B 0 . . . 5.41 68.04 24 5.68 Yes 60 1.25 Yes 0 0 No -23 0.42 No 43 68.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75483436 - NM_001040108 MLH3 0 . . . 7.8 91.54 25 4.87 No 6 0.63 No 0 0 No -24 0.86 Yes 38 59.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41000607 + NM_001164269 RAD51 0 . . . 1.55 85.02 16 5.66 Yes 4 0.72 No 0 0 No -15 0.57 No 49 82.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41223852 - NM_007294 BRCA1 0 . . . 4.74 78.97 28 7.09 Yes 13 1.21 Yes 0 0 No -27 0.94 Yes 45 92.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68775837 + NM_004360 CDH1 0 . . . 3.92 70.85 21 4.79 No 23 1.58 Yes 0 0 No -20 0.75 Yes 45 70.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68881138 + NM_133509 RAD51B 0 . . . 2.54 78.03 55 7.6 Yes 63 1.5 Yes 0 0 No -30 0.89 Yes 48 49.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1230140 + NM_000455 STK11 0 . . . 3.34 70.08 21 4.8 No 63 -1.67 No 0 0 No -20 0.96 Yes 41 20.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89656770 + NM_000314 PTEN 0 . . . 1.6 62.16 26 4.36 No 74 0.6 No 0 0 No -25 0.86 Yes 42 57.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68395460 + NM_133509 RAD51B 0 . . . 4.14 80.14 9 4.56 No 6 0.51 No 0 0 No -28 0.62 No 51 61.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6026239 - NM_000535 PMS2 0 . . . 1.92 66.46 24 5.2 No 16 1.1 Yes 0 0 No -23 0.93 Yes 42 90.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59760660 - NM_032043 BRIP1 0 . . . 3.42 75.45 19 5 No 32 0.54 No 0 0 No -40 0.3 No 46 39.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90960640 - NM_002485 NBN 0 . . . 6.03 80.48 30 6.61 Yes 5 1.45 Yes 0 0 No -29 0.73 Yes 53 76.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59817422 - NM_032043 BRIP1 0 . . . 3.08 68.04 21 5.91 Yes 68 -6.38 No 0 0 No -20 0.48 No 50 68.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131900842 + NM_005732 RAD50 0 . . . 8.5 89.38 9 5.08 No 23 0.59 No 0 0 No -21 0.91 Yes 35 80.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131938492 + NM_005732 RAD50 0 . . . 4.41 0 21 5.16 No 74 -1.9 No 0 0 No -30 0.48 No 36 90.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47672911 + NM_000251 MSH2 0 . . . 2.68 75.5 57 7.45 Yes 10 0.69 No 0 0 No -21 0.53 No 48 93.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47804027 + NM_000251 MSH2 0 . . . 2.59 77.67 34 5.84 Yes 2 1.48 Yes 0 0 No -29 0.69 Yes 25 88.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56806107 + NM_058216 RAD51C 0 . . . 4.14 64.47 16 5.8 Yes 54 0.08 No 0 0 No -27 0.21 No 41 48.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75496590 - NM_001040108 MLH3 0 . . . 1.39 80.07 25 7.02 Yes 45 1.19 Yes 0 0 No -24 0.8 Yes 26 75.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190721517 + NM_000534 PMS1 0 . . . 0.4 0 21 4.68 No 14 2.12 Yes 0 0 No -22 0.72 Yes 35 88.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32958194 + NM_000059 BRCA2 0 . . . 2.06 73.89 40 6.74 Yes 64 -5.12 No 0 0 No -34 0.54 No 51 77.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47770079 + NM_000251 MSH2 0 . . . 0.38 83.28 15 4.95 No 20 0.69 No 0 0 No -49 0.86 Yes 38 73.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21986447 - NM_000077 CDKN2A 0 . . . 0.29 74.62 18 5.48 No 4 0.81 Yes 0 0 No -26 0.6 No 49 50.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68380720 + NM_133509 RAD51B 0 . . . 2.86 84.41 31 5.57 Yes 38 1.96 Yes 0 0 No -58 0.9 Yes 44 85.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89638379 + NM_000314 PTEN 0 . . . 4.07 83.68 17 4.8 No 15 0.36 No 0 0 No -16 0.43 No 43 48.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6021600 - NM_000535 PMS2 0 . . . 1.74 78.72 31 5.56 Yes 73 0.46 No 0 0 No -33 0.53 No 45 58.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32896353 + NM_000059 BRCA2 0 . . . 8.01 91.24 22 5.95 Yes 59 2 Yes 0 0 No -21 0.57 No 34 57.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69124646 + NM_133509 RAD51B 0 . . . 5.6 77.25 32 5.87 Yes 13 0.45 No 0 0 No -22 0.58 No 45 79.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68479971 + NM_133509 RAD51B 0 . . . 4.68 81.59 18 6.91 Yes 44 -2.95 No 0 0 No -28 0.75 Yes 46 86.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68943930 + NM_133509 RAD51B 0 . . . 1.94 65.53 17 4.8 No 52 0.12 No 0 0 No -16 0.52 No 53 46.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41025866 + NM_001164269 RAD51 0 . . . 0.85 68.65 20 5.1 No 34 0.48 No 0 0 No -19 0.72 Yes 62 21.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94211583 - NM_005591 MRE11 0 . . . 2.98 61.56 29 6.32 Yes 13 1.73 Yes 0 0 No -28 0.79 Yes 45 88.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68804919 + NM_004360 CDH1 0 . . . 5.02 83.91 33 5.81 Yes 72 -4.14 No 0 0 No -32 0.7 Yes 48 86.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6036333 - NM_000535 PMS2 0 . . . 3.15 66.51 22 5.05 No 45 1.31 Yes 0 0 No -24 0.38 No 13 50.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59825879 - NM_032043 BRIP1 0 . . . 7.14 82.36 14 5.48 No 67 0.42 No 0 0 No -20 0.72 Yes 48 85.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190710349 + NM_000534 PMS1 0 . . . 5.9 69.98 23 4.05 No 49 0.54 No 0 0 No -26 0.65 No 45 82.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108231504 + NM_000051 ATM 0 . . . 3.89 67.34 29 5.74 Yes 64 -5.24 No 0 0 No -28 0.96 Yes 45 78.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190723683 + NM_000534 PMS1 0 . . . 6.73 83.28 25 6.16 Yes 74 1.12 Yes 0 0 No -24 0.92 Yes 38 75.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47652406 + NM_000251 MSH2 0 . . . 3 75.1 22 5.74 Yes 5 1 Yes 0 0 No -21 0.59 No 31 61.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84392030 - NM_139076 FAM175A 0 . . . 4.37 78.46 22 6.46 Yes 48 1.18 Yes 0 0 No -21 0.49 No 37 82.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90963275 - NM_002485 NBN 0 . . . 4.08 80.79 17 3.55 No 41 1.7 Yes 0 0 No -25 0.72 Yes 52 89.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23651617 - NM_024675 PALB2 0 . . . 0.12 0 15 4.58 No 11 0.44 No 0 0 No -36 0.55 No 47 88.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75483178 - NM_001040108 MLH3 0 . . . 1.39 68.31 32 7.28 Yes 13 -3.3 No 0 0 No -31 0.8 Yes 58 25.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69087383 + NM_133509 RAD51B 0 . . . 1.5 67.22 20 4.16 No 69 1.37 Yes 0 0 No -24 0.71 Yes 38 40.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190738712 + NM_000534 PMS1 0 . . . 3.43 74.37 18 7 Yes 1 0.37 No 0 0 No -17 0.4 No 57 43.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69081660 + NM_133509 RAD51B 0 . . . 1.48 70.33 37 8.13 Yes 24 1.48 Yes 0 0 No -36 0.41 No 34 45.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108187919 + NM_000051 ATM 0 . . . 1.19 81.72 9 5.74 Yes 3 0.82 Yes 0 0 No -34 0.7 Yes 50 91.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108171821 + NM_000051 ATM 0 . . . 5.07 65.45 19 6.41 Yes 23 1.02 Yes 0 0 No -23 0.58 No 35 84.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89701710 + NM_000314 PTEN 0 . . . 1.67 80.65 22 4.49 No 16 0.34 No 0 0 No -21 0.93 Yes 48 70.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68931853 + NM_133509 RAD51B 0 . . . 2.54 68.91 32 5.84 Yes 6 0.73 No 0 0 No -31 0.75 Yes 42 44.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84383494 - NM_139076 FAM175A 0 . . . 6.06 83.52 15 6.52 Yes 0 1.24 Yes 0 0 No -21 0.57 No 39 94.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21977860 - NM_000077 CDKN2A 0 . . . 1.73 0 36 6.23 Yes 16 -1.81 No 0 0 No -35 0.87 Yes 19 61.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68448836 + NM_133509 RAD51B 0 . . . 3.9 80.12 11 4.12 No 72 0.03 No 0 0 No -31 0.65 No 42 62.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90991003 - NM_002485 NBN 0 . . . 1.2 74.4 32 4.11 No 48 0.1 No 0 0 No -21 0.42 No 26 46.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68672915 + NM_133509 RAD51B 0 . . . 6.62 87.41 43 7.86 Yes 31 1.62 Yes 0 0 No -27 0.84 Yes 49 54.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47695302 + NM_000251 MSH2 0 . . . 2.77 66.83 19 4.8 No 12 0.5 No 0 0 No -18 0.95 Yes 37 41.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68717531 + NM_133509 RAD51B 0 . . . 2.23 76.31 25 5.48 No 76 -5.23 No 0 0 No -24 0.71 Yes 49 71.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69051272 + NM_133509 RAD51B 0 . . . 1.58 0 20 5.1 No 71 1.73 Yes 0 0 No -19 0.55 No 40 88.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47772152 + NM_000251 MSH2 0 . . . 2.14 64.59 29 5.36 No 47 0.91 Yes 0 0 No -25 0.55 No 40 84.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23644943 - NM_024675 PALB2 0 . . . 1.66 72.58 23 4.61 No 60 1.79 Yes 0 0 No -23 0.91 Yes 38 83.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59771831 - NM_032043 BRIP1 0 . . . 1.34 75.64 25 6.27 Yes 76 0.95 Yes 0 0 No -24 0.79 Yes 36 94.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108143093 + NM_000051 ATM 0 . . . 7.4 80.79 25 5.73 Yes -1 1.43 Yes 0 0 No -24 0.54 No 39 55.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108181099 + NM_000051 ATM 0 . . . 3.08 72.73 37 6.48 Yes 42 0.27 No 0 0 No -23 0.64 No 48 57.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84382077 - NM_139076 FAM175A 0 . . . 1.54 67.06 27 4.21 No 65 0.75 No 0 0 No -22 0.8 Yes 43 79.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215637020 - NM_000465 BARD1 0 . . . 7.31 86.25 31 5.61 Yes 34 0.59 No 0 0 No -30 0.74 Yes 46 58.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68310504 + NM_133509 RAD51B 0 . . . 6.91 86.22 44 5.31 No 56 1.33 Yes 0 0 No -29 0.45 No 43 70.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68572330 + NM_133509 RAD51B 0 . . . 6.57 81.39 21 4.58 No 44 0.25 No 0 0 No -49 0.85 Yes 38 32.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69119157 + NM_133509 RAD51B 0 . . . 4.58 76.57 27 5.03 No 12 0.46 No 0 0 No -24 0.7 Yes 46 61.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69045381 + NM_133509 RAD51B 0 . . . 0.71 64.83 17 4.8 No 62 0.98 Yes 0 0 No -28 0.43 No 39 20.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47674124 + NM_000251 MSH2 0 . . . 0.67 80.49 39 8.15 Yes 26 0.82 Yes 0 0 No -32 0.78 Yes 27 54.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47680040 + NM_000251 MSH2 0 . . . 0.32 77.71 13 4.96 No 60 0.07 No 0 0 No -54 0.26 No 35 46.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21978333 - NM_000077 CDKN2A 0 . . . 5.95 76.93 11 4.12 No 59 0.18 No 0 0 No -31 0.87 Yes 41 50.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29082929 - NM_001005735 CHEK2 0 . . . 6.11 82.14 27 5.1 No 0 0.76 No 0 0 No -26 0.87 Yes 49 48.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84385495 - NM_139076 FAM175A 0 . . . 2.24 69.44 23 5.26 No 7 0.7 No 0 0 No -22 0.58 No 42 50.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89727870 + NM_000314 PTEN 0 . . . 0.88 72.08 47 6.56 Yes 69 0.34 No 0 0 No -28 0.56 No 48 58.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69146342 + NM_133509 RAD51B 0 . . . 3.54 68.22 39 6.13 Yes 7 0.94 Yes 0 0 No -30 0.67 Yes 44 47.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68716865 + NM_133509 RAD51B 0 . . . 5.83 78.17 26 5.1 No 25 0.52 No 0 0 No -25 0.63 No 39 57.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68520925 + NM_133509 RAD51B 0 . . . 0.46 65.03 28 5.37 No 63 0.6 No 0 0 No -42 0.52 No 49 45.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89725179 + NM_000314 PTEN 0 . . . 3.39 77.63 31 4.35 No 0 1.08 Yes 0 0 No -30 0.44 No 49 89.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215669784 - NM_000465 BARD1 0 . . . 1.41 84.22 24 5.01 No 33 1.07 Yes 0 0 No -23 0.6 No 50 42.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108169281 + NM_000051 ATM 0 . . . 2.56 78.16 53 7.43 Yes 41 1.19 Yes 0 0 No -57 0.46 No 50 54.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52441687 - NM_004656 BAP1 0 . . . 4.23 75.04 38 4.73 No 7 0.34 No 0 0 No -25 0.34 No 51 90.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69061249 + NM_133509 RAD51B 0 . . . 2.42 68.56 22 4.71 No 63 1.46 Yes 0 0 No -21 0.41 No 20 38.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68605632 + NM_133509 RAD51B 0 . . . 1.49 77.3 18 6.25 Yes 12 0.64 No 0 0 No -27 0.6 No 46 76.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215612273 - NM_000465 BARD1 0 . . . 5.54 73.92 17 5.74 Yes 21 0.92 Yes 0 0 No -26 0.64 No 46 56.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59912580 - NM_032043 BRIP1 0 . . . 3.95 75.66 38 6.1 Yes 72 1.22 Yes 0 0 No -23 0.59 No 51 63.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108149907 + NM_000051 ATM 0 . . . 1.76 75.7 17 4.79 No 70 1.33 Yes 0 0 No -58 0.62 No 49 88.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32910123 + NM_000059 BRCA2 0 . . . 2.42 67.99 30 4.46 No 19 1.29 Yes 0 0 No -29 0.59 No 39 93.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41004752 + NM_001164269 RAD51 0 . . . 4.82 75.99 9 3.87 No 52 1.17 Yes 0 0 No -26 0.65 No 43 86.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68827664 + NM_133509 RAD51B 0 . . . 8.33 75.54 32 4.25 No 12 0.25 No 0 0 No -56 0.4 No 46 88.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69083942 + NM_133509 RAD51B 0 . . . 3.16 96.17 21 5.2 No 44 0.58 No 0 0 No -20 0.41 No 43 47.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68782472 + NM_004360 CDH1 0 . . . 6.56 84.13 14 4.9 No 22 0.34 No 0 0 No -44 0.56 No 51 62.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69072942 + NM_133509 RAD51B 0 . . . 7.13 86.24 28 4.92 No -1 0.54 No 0 0 No -28 0.53 No 48 78.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68875477 + NM_133509 RAD51B 0 . . . 1.14 57.4 24 6.27 Yes 6 0.16 No 0 0 No -24 0.46 No 34 52.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94218053 - NM_005591 MRE11 0 . . . 0.82 67.25 23 5.2 No 27 -2.38 No 0 0 No -22 0.83 Yes 39 30.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68972369 + NM_133509 RAD51B 0 . . . 3.99 75.44 35 5.8 Yes 16 1.19 Yes 0 0 No -34 0.46 No 42 90.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29085628 - NM_001005735 CHEK2 0 . . . 1.47 65.83 25 5 No 19 0.26 No 0 0 No -24 0.86 Yes 27 41.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6018659 - NM_000535 PMS2 0 . . . 1.83 79.69 23 5.81 Yes 7 1.21 Yes 0 0 No -23 0.3 No 51 80.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59936553 - NM_032043 BRIP1 0 . . . 4.46 74.14 12 5.27 No 13 1.47 Yes 0 0 No -24 0.53 No 45 95.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68421142 + NM_133509 RAD51B 0 . . . 6.21 77.05 28 5.24 No 14 2.27 Yes 0 0 No -30 0.46 No 44 90.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215590136 - NM_000465 BARD1 0 . . . 0.3 72.02 23 5.74 Yes -3 0.72 No 0 0 No -26 0.44 No 45 68.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105183647 + NM_021930 RINT1 0 . . . 2.67 62.66 17 5.06 No 68 1.37 Yes 0 0 No -27 0.75 Yes 42 33.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21977903 - NM_000077 CDKN2A 0 . . . 6.79 78.12 15 5 No 63 0.34 No 0 0 No -24 0.68 Yes 38 68.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131976668 + NM_005732 RAD50 0 . . . 3.09 77.3 37 5.22 No 68 0.71 No 0 0 No -19 0.45 No 44 76.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47692142 + NM_000251 MSH2 0 . . . 2.9 68.76 26 5.66 Yes 53 0.21 No 0 0 No -28 0.47 No 51 54.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108143675 + NM_000051 ATM 0 . . . 0.19 56.09 17 4.36 No 74 -5.92 No 0 0 No -31 0.37 No 48 75.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41024028 + NM_001164269 RAD51 0 . . . 5.26 78.83 24 4.93 No 68 -3.28 No 0 0 No -24 0.73 Yes 41 61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47697255 + NM_000251 MSH2 0 . . . 2.43 65.88 22 4.46 No 16 1.2 Yes 0 0 No -21 0.68 Yes 42 93.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69121333 + NM_133509 RAD51B 0 . . . 5.14 64.76 26 5.1 No 63 0.38 No 0 0 No -25 0.95 Yes 42 64.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108201641 + NM_000051 ATM 0 . . . 6.5 66.4 49 8.35 Yes 73 0.38 No 0 0 No -24 0.8 Yes 45 83.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59913519 - NM_032043 BRIP1 0 . . . 4.06 77.77 73 7.73 Yes 58 -3.88 No 0 0 No -28 0.81 Yes 50 54.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75494327 - NM_001040108 MLH3 0 . . . 7.11 76.88 20 4.8 No 12 0.28 No 0 0 No -19 0.91 Yes 46 93.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68593799 + NM_133509 RAD51B 0 . . . 7.29 74.53 16 5.83 Yes 65 0.09 No 0 0 No -27 0.6 No 46 81.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6013252 - NM_000535 PMS2 0 . . . 4.2 0 45 7.07 Yes 10 0.43 No 0 0 No -32 0.72 Yes 41 58.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108140927 + NM_000051 ATM 0 . . . 4.56 77.96 15 4.58 No 21 0.08 No 0 0 No -56 0.56 No 49 72.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6011971 - NM_000535 PMS2 0 . . . 2.09 73.96 35 6.85 Yes 53 0.17 No 0 0 No -34 0.8 Yes 47 57.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68654865 + NM_133509 RAD51B 0 . . . 2.31 78.78 17 5.28 No 39 1.17 Yes 0 0 No -42 0.48 No 48 55.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45803532 - NM_001048171 MUTYH 0 . . . 8.64 77.93 23 6.63 Yes 53 1.43 Yes 0 0 No -22 0.94 Yes 39 86.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40989911 + NM_001164269 RAD51 0 . . . 0.3 68.06 25 6 Yes 25 1.12 Yes 0 0 No -24 0.87 Yes 33 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190741464 + NM_000534 PMS1 0 . . . 6.6 69.53 15 5.74 Yes 44 0.93 Yes 0 0 No -46 0.29 No 38 71.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69047338 + NM_133509 RAD51B 0 . . . 6.74 77.98 14 4.2 No 1 1.34 Yes 0 0 No -44 0.48 No 43 83.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68752761 + NM_133509 RAD51B 0 . . . 5.21 79.21 21 5.18 No 0 1.28 Yes 0 0 No -21 0.58 No 44 88.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59920032 - NM_032043 BRIP1 0 . . . 5.68 80.46 14 5.34 No -4 0.45 No 0 0 No -32 0.46 No 47 92.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108194444 + NM_000051 ATM 0 . . . 0.16 64.03 17 6.84 Yes 62 -5.72 No 0 0 No -29 0.39 No 52 27.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68816178 + NM_133509 RAD51B 0 . . . 6.5 86.2 28 5.43 No 9 1.12 Yes 0 0 No -23 0.44 No 49 92.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108168667 + NM_000051 ATM 0 . . . 3.68 78.27 16 4.57 No 66 -4.97 No 0 0 No -37 0.83 Yes 52 44.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69097923 + NM_133509 RAD51B 0 . . . 0.66 72.53 59 5.3 No 61 -5.78 No 0 0 No -39 0.41 No 52 58.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68862966 + NM_133509 RAD51B 0 . . . 0.23 73.31 18 4.36 No 76 0.28 No 0 0 No -17 0.8 Yes 45 47.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68791649 + NM_133509 RAD51B 0 . . . 5.32 88.75 18 4.6 No 28 0.04 No 0 0 No -29 0.89 Yes 50 61.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41270531 - NM_007294 BRCA1 0 . . . 2.98 68.39 36 6.38 Yes 75 -2.83 No 0 0 No -36 0.5 No 50 52.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108110557 + NM_000051 ATM 0 . . . 6.12 86.11 26 4.34 No 66 0.63 No 0 0 No -26 0.68 Yes 44 78.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41271544 - NM_007294 BRCA1 0 . . . 4.19 75.63 44 5.22 No 61 0.41 No 0 0 No -43 0.76 Yes 47 73.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215607224 - NM_000465 BARD1 0 . . . 5.97 80.02 36 6.81 Yes 65 0.74 No 0 0 No -24 0.92 Yes 40 45.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40988286 + NM_001164269 RAD51 0 . . . 0.11 74.73 22 5.29 No 33 1.13 Yes 0 0 No -29 0.56 No 19 30.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68379633 + NM_133509 RAD51B 0 . . . 0.76 74.26 18 4.75 No 33 1.17 Yes 0 0 No -29 0.56 No 25 38.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1217237 + NM_000455 STK11 0 . . . 2.26 0 10 4 No 9 0.44 No 0 0 No -39 0.71 Yes 32 89.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131901646 + NM_005732 RAD50 0 . . . 7.1 87.13 16 4.92 No 10 0.79 Yes 0 0 No -45 0.66 No 48 84.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152365081 - NM_005431 XRCC2 0 . . . 2.24 0 15 4.58 No 76 -1.07 No 0 0 No -54 0.64 No 14 64.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47682871 + NM_000251 MSH2 0 . . . 0.35 0 30 4.6 No 26 0.6 No 0 0 No -23 0.7 Yes 32 32.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108181230 + NM_000051 ATM 0 . . . 4.48 71.68 26 5.38 No 9 0.69 No 0 0 No -25 0.73 Yes 49 32.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48030077 + NM_000179 MSH6 0 . . . 2.4 0 18 4.9 No 42 0.36 No 0 0 No -22 0.42 No 24 74.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69058098 + NM_133509 RAD51B 0 . . . 6.62 87.94 20 5.74 Yes 46 0.02 No 0 0 No -19 0.79 Yes 39 62.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68320004 + NM_133509 RAD51B 0 . . . 0.02 69.83 33 6.83 Yes 47 0.97 Yes 0 0 No -32 0.77 Yes 46 63.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215611787 - NM_000465 BARD1 0 . . . 0.89 81.23 30 3.38 No 51 0.75 No 0 0 No -29 0.49 No 34 67.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21983123 - NM_000077 CDKN2A 0 . . . 1.3 75.1 29 6.62 Yes 70 -2.43 No 0 0 No -28 0.96 Yes 47 56.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59807672 - NM_032043 BRIP1 0 . . . 6.83 81.37 27 5.44 No 64 1.11 Yes 0 0 No -26 0.6 No 45 94.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69004922 + NM_133509 RAD51B 0 . . . 5.33 80.32 33 4.97 No 4 0.16 No 0 0 No -28 0.84 Yes 49 60.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68566978 + NM_133509 RAD51B 0 . . . 0 65.99 25 4.77 No 43 0.43 No 0 0 No -24 0.7 Yes 53 46.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68423516 + NM_133509 RAD51B 0 . . . 0.24 57.31 17 4.8 No 67 -4.67 No 0 0 No -44 0.28 No 15 24.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41268050 - NM_007294 BRCA1 0 . . . 0.38 59.51 51 6.74 Yes 10 1.25 Yes 0 0 No -34 0.81 Yes 43 38.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68437192 + NM_133509 RAD51B 0 . . . 2.49 72.84 16 4.69 No 5 0.23 No 0 0 No -18 0.56 No 49 51.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68727380 + NM_133509 RAD51B 0 . . . 5 68.18 15 4.86 No 11 0.92 Yes 0 0 No -26 0.28 No 47 78.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94159068 - NM_005591 MRE11 0 . . . 3.23 73.76 12 5.23 No -2 0.99 Yes 0 0 No -23 0.67 Yes 34 67.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68438216 + NM_133509 RAD51B 0 . . . 9.52 79.72 46 6.67 Yes 31 1.91 Yes 0 0 No -20 0.86 Yes 27 68.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32896686 + NM_000059 BRCA2 0 . . . 0.7 66.41 20 5.1 No 73 -5.53 No 0 0 No -19 0.38 No 48 39.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215633473 - NM_000465 BARD1 0 . . . 5.07 72.34 14 4.47 No 58 1.27 Yes 0 0 No -13 0.43 No 51 96.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48020042 + NM_000179 MSH6 0 . . . 9.66 88.54 35 4.4 No 57 1.08 Yes 0 0 No -34 0.68 Yes 46 38.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56770442 + NM_058216 RAD51C 0 . . . 0.3 80.6 48 7.79 Yes 76 1.45 Yes 0 0 No -41 0.36 No 50 91.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59758544 - NM_032043 BRIP1 0 . . . 4.94 71.81 19 5.57 Yes 62 1.06 Yes 0 0 No -18 0.71 Yes 45 62.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59790450 - NM_032043 BRIP1 0 . . . 5.05 65.23 20 3.96 No -2 0.38 No 0 0 No -19 0.69 Yes 45 45.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29090529 - NM_001005735 CHEK2 0 . . . 1.28 63.83 19 6.31 Yes 70 0.46 No 0 0 No -42 0.39 No 42 53.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29095263 - NM_001005735 CHEK2 0 . . . 2.69 69.75 19 8.43 Yes -2 0.81 Yes 0 0 No -18 0.8 Yes 60 50.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108223722 + NM_000051 ATM 0 . . . 1.6 74.23 38 5.96 Yes 63 -5.28 No 0 0 No -20 0.8 Yes 50 28.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190654211 + NM_000534 PMS1 0 . . . 6.31 77.55 38 6.08 Yes 7 1.04 Yes 0 0 No -57 0.5 No 39 83.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68896688 + NM_133509 RAD51B 0 . . . 0.1 68.27 12 4.63 No 67 0.46 No 0 0 No -22 0.77 Yes 50 79.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68878220 + NM_133509 RAD51B 0 . . . 4.91 76.25 12 4.8 No -3 0.65 No 27 0.46 Yes -24 0.46 No 41 90.05 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr17 59924173 - NM_032043 BRIP1 0 . . . 7.07 81.53 14 4.71 No 46 0.91 Yes 0 0 No -22 0.93 Yes 41 87.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47681858 + NM_000251 MSH2 0 . . . 2.9 0 22 3.87 No 33 1.51 Yes 0 0 No -24 0.69 Yes 25 70.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33446171 - NM_002878 RAD51D 0 . . . 5.41 87.42 36 6.24 Yes 75 -1.86 No 0 0 No -35 0.49 No 47 60.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68798313 + NM_133509 RAD51B 0 . . . 2.3 68.22 25 4.9 No 25 0.69 No 0 0 No -25 0.76 Yes 45 79.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215670629 - NM_000465 BARD1 0 . . . 6.92 73.73 21 5.8 Yes 10 0.67 No 0 0 No -20 0.56 No 43 79.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190656314 + NM_000534 PMS1 0 . . . 0.92 76.63 30 6.13 Yes 40 -2.29 No 0 0 No -29 0.79 Yes 53 45.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47736257 + NM_000251 MSH2 0 . . . 3.34 85.9 16 6.06 Yes 10 0.15 No 0 0 No -30 0.62 No 48 68.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68826515 + NM_004360 CDH1 0 . . . 3.82 78.83 25 5.29 No 39 1.36 Yes 0 0 No -24 0.71 Yes 43 87.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47736188 + NM_000251 MSH2 0 . . . 1.37 74.31 22 4.9 No 65 -3.47 No 0 0 No -22 0.45 No 40 58.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68619835 + NM_133509 RAD51B 0 . . . 1.04 67.39 26 5.24 No 16 0.54 No 0 0 No -25 0.5 No 46 77.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47694794 + NM_000251 MSH2 0 . . . 3.27 74.73 22 5.18 No 33 0.09 No 0 0 No -21 0.86 Yes 42 52.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108226703 + NM_000051 ATM 0 . . . 1.74 72.53 21 4.68 No 23 0.74 No 0 0 No -24 0.8 Yes 51 37.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68845556 + NM_133509 RAD51B 0 . . . 10.03 85.52 23 5.05 No 68 1.29 Yes 0 0 No -23 0.61 No 30 69.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89631948 + NM_000314 PTEN 0 . . . 6.75 83.61 28 5.66 Yes -1 0.2 No 0 0 No -25 0.6 No 44 41.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1226083 + NM_000455 STK11 0 . . . 4.15 74.6 47 9.2 Yes 55 0.58 No 0 0 No -29 0.52 No 36 48.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68853206 + NM_133509 RAD51B 0 . . . 5.31 69.91 15 4.58 No 56 1.39 Yes 0 0 No -23 0.35 No 46 69.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68681145 + NM_133509 RAD51B 0 . . . 5.92 81.42 31 5.28 No 9 0.86 Yes 0 0 No -57 0.56 No 42 93.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45806094 - NM_001048171 MUTYH 0 . . . 4.56 68.3 15 4.42 No 68 0.08 No 0 0 No -42 0.32 No 42 26.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68896072 + NM_133509 RAD51B 0 . . . 1.28 55.22 82 9.17 Yes 10 0.25 No 0 0 No -28 0.55 No 48 74.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59755662 - NM_032043 BRIP1 0 . . . 4.82 87.51 30 5.41 No 10 1.31 Yes 0 0 No -29 0.59 No 47 38.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52443551 - NM_004656 BAP1 0 . . . 0.01 76.93 21 4.89 No 57 -4.9 No 0 0 No -20 0.4 No 20 43.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47703873 + NM_000251 MSH2 0 . . . 4.82 76.23 34 6.63 Yes 35 0.33 No 0 0 No -49 0.48 No 46 73.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108127149 + NM_000051 ATM 0 . . . 2.13 75.38 32 5.71 Yes 3 0.06 No 0 0 No -31 0.71 Yes 46 24.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75518607 - NM_001040108 MLH3 0 . . . 2.51 0 26 5.61 Yes 0 1.1 Yes 0 0 No -25 0.82 Yes 48 73.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68607369 + NM_133509 RAD51B 0 . . . 5.05 76.11 28 6.67 Yes 38 0.84 Yes 0 0 No -27 0.9 Yes 44 61.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69141487 + NM_133509 RAD51B 0 . . . 2.22 71.4 23 6.93 Yes 69 -6.17 No 0 0 No -22 0.93 Yes 46 77.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105208844 + NM_021930 RINT1 0 . . . 4.93 77.52 45 6.54 Yes 20 0.34 No 0 0 No -34 0.46 No 34 43.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69079827 + NM_133509 RAD51B 0 . . . 3.2 78.01 34 5.83 Yes 16 0.67 No 0 0 No -33 0.71 Yes 42 90.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68324481 + NM_133509 RAD51B 0 . . . 4.34 78.03 18 4.58 No 13 0.99 Yes 0 0 No -47 0.82 Yes 45 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59794992 - NM_032043 BRIP1 0 . . . 0.94 60.8 17 5.83 Yes 75 -5.33 No 0 0 No -16 0.38 No 49 52.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215652359 - NM_000465 BARD1 0 . . . 5.28 75.43 30 5.05 No 70 1.05 Yes 0 0 No -19 0.66 No 36 69.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21967852 - NM_000077 CDKN2A 0 . . . 4.47 74.52 19 5.05 No 60 0.5 No 0 0 No -29 0.82 Yes 47 74.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69042142 + NM_133509 RAD51B 0 . . . 6.95 96.1 12 4.79 No 24 0.93 Yes 0 0 No -33 0.2 No 49 92.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89675070 + NM_000314 PTEN 0 . . . 5.12 79.94 19 4.47 No 13 0.17 No 0 0 No -60 0.37 No 51 93.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104182284 - NM_001100119 XRCC3 0 . . . 6.26 85.24 15 6.16 Yes NA NA NA 0 0 No -31 0.85 Yes 35 47.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108148091 + NM_000051 ATM 0 . . . 4.42 0 16 5.58 Yes 29 1.45 Yes 0 0 No -30 0.76 Yes 56 59.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68506950 + NM_133509 RAD51B 0 . . . 3.89 77.15 15 4.58 No 75 -4.89 No 0 0 No -32 0.63 No 42 49.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68844100 + NM_133509 RAD51B 0 . . . 4.11 0 23 3.88 No 17 1.64 Yes 0 0 No -23 0.62 No 41 51.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68716218 + NM_133509 RAD51B 0 . . . 2.82 70.03 39 6.43 Yes 19 0.31 No 0 0 No -38 0.57 No 39 54.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84394287 - NM_139076 FAM175A 0 . . . 0.42 71.16 17 4.69 No 48 0.91 Yes 0 0 No -37 0.66 No 47 85.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190653352 + NM_000534 PMS1 0 . . . 1.96 71.17 18 5.29 No 57 1.2 Yes 0 0 No -21 0.44 No 44 71.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23652307 - NM_024675 PALB2 0 . . . 10.11 78.25 19 5 No 75 2.29 Yes 0 0 No -18 0.62 No 47 77.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84393611 - NM_139076 FAM175A 0 . . . 3.93 73.37 18 5.46 No 41 0.58 No 0 0 No -24 0.67 Yes 42 73.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41212897 - NM_007294 BRCA1 0 . . . 2.79 68.34 18 6.84 Yes 13 0.41 No 0 0 No -28 0.75 Yes 40 74.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68363936 + NM_133509 RAD51B 0 . . . 0.63 66.78 24 5.68 Yes 17 0.5 No 0 0 No -23 0.93 Yes 45 49.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90964591 - NM_002485 NBN 0 . . . 4 75.46 21 6.54 Yes 8 1.04 Yes 0 0 No -20 0.92 Yes 40 59.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47801168 + NM_000251 MSH2 0 . . . 4.79 75.34 57 7.28 Yes 61 -3.81 No 0 0 No -28 0.33 No 50 58.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215640429 - NM_000465 BARD1 0 . . . 6.41 85.9 14 4.47 No 74 0.75 No 0 0 No -34 0.81 Yes 48 79.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23654218 - NM_024675 PALB2 0 . . . 3.4 89.88 22 7.27 Yes 63 1.69 Yes 0 0 No -21 0.84 Yes 50 70.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69120680 + NM_133509 RAD51B 0 . . . 1.25 64.07 29 5.91 Yes 56 -4.88 No 0 0 No -32 0.66 No 43 41.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37035567 + NM_000249 MLH1 0 . . . 9.09 90.07 17 5.29 No 17 0.65 No 0 0 No -16 0.48 No 41 82.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68548590 + NM_133509 RAD51B 0 . . . 3.88 76.03 25 5.26 No 4 0.15 No 0 0 No -24 0.68 Yes 40 50.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23631872 - NM_024675 PALB2 0 . . . 0.44 75.05 22 5.29 No 30 -2.78 No 0 0 No -21 0.86 Yes 51 35.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41248293 - NM_007294 BRCA1 0 . . . 0.83 81.68 10 4 No 38 1.49 Yes 0 0 No -29 0.75 Yes 15 31.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68891014 + NM_133509 RAD51B 0 . . . 4.36 77.28 32 7.35 Yes 45 1.49 Yes 0 0 No -31 0.56 No 47 89.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68945363 + NM_133509 RAD51B 0 . . . 6.14 88.51 24 5.29 No 3 1.59 Yes 0 0 No -23 0.96 Yes 40 71.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59815877 - NM_032043 BRIP1 0 . . . 5.08 76.93 61 6.81 Yes 20 1.75 Yes 0 0 No -23 0.92 Yes 47 82.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59796985 - NM_032043 BRIP1 0 . . . 5.66 86.71 35 6.16 Yes 76 1.48 Yes 0 0 No -34 0.79 Yes 50 88.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68310999 + NM_133509 RAD51B 0 . . . 2.58 69.89 38 6.33 Yes 19 1.19 Yes 0 0 No -26 0.62 No 39 69.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29119396 - NM_001005735 CHEK2 0 . . . 6.71 79.84 27 6.86 Yes 30 0.95 Yes 0 0 No -26 0.8 Yes 46 41.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215620348 - NM_000465 BARD1 0 . . . 4.88 73.87 48 6.05 Yes 24 0.74 No 0 0 No -33 0.92 Yes 34 58.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68560838 + NM_133509 RAD51B 0 . . . 4.14 76.35 27 4.57 No 18 0.78 Yes 0 0 No -24 0.76 Yes 40 75.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190677132 + NM_000534 PMS1 0 . . . 1.96 60.76 18 4.9 No 60 -5.54 No 0 0 No -25 0.49 No 44 36.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108093661 + NM_000051 ATM 0 . . . 2.95 74.39 62 8.36 Yes 55 -0.6 No 0 0 No -31 0.73 Yes 47 63.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68905238 + NM_133509 RAD51B 0 . . . 8.16 93.54 28 5.05 No 27 0.35 No 0 0 No -23 0.59 No 44 45.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131907551 + NM_005732 RAD50 0 . . . 1.8 68.02 34 7.39 Yes 72 0.78 Yes 0 0 No -33 0.76 Yes 21 48.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69130524 + NM_133509 RAD51B 0 . . . 6.99 80.15 46 5.91 Yes 22 1.27 Yes 0 0 No -45 0.7 Yes 46 55.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68396910 + NM_133509 RAD51B 0 . . . 4.99 74.68 27 4.2 No -3 0.04 No 0 0 No -26 0.6 No 40 36.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94171124 - NM_005591 MRE11 0 . . . 4.46 80.19 17 4.81 No 10 1.06 Yes 0 0 No -21 0.68 Yes 48 92.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59917235 - NM_032043 BRIP1 0 . . . 2.12 62.58 13 5.83 Yes 75 1.41 Yes 0 0 No -29 0.42 No 34 55.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69103915 + NM_133509 RAD51B 0 . . . 1.51 80.65 23 6.39 Yes 3 0.81 Yes 0 0 No -22 0.8 Yes 50 76.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68341013 + NM_133509 RAD51B 0 . . . 5.51 82.5 24 4.76 No 27 0.66 No 0 0 No -23 0.84 Yes 44 68.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29086937 - NM_001005735 CHEK2 0 . . . 3.68 70.85 16 4.47 No 24 1.05 Yes 0 0 No -15 0.59 No 44 75.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68934816 + NM_133509 RAD51B 0 . . . 3.05 75.58 16 5.45 No 22 0.32 No 0 0 No -23 0.7 Yes 40 98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108100778 + NM_000051 ATM 0 . . . 3.6 0 25 5.82 Yes 72 -1.4 No 0 0 No -24 0.69 Yes 30 48.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32975346 + NM_000059 BRCA2 0 . . . 7.77 80.41 34 5.31 No 8 1.94 Yes 0 0 No -33 0.68 Yes 50 79.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69012714 + NM_133509 RAD51B 0 . . . 8.46 81.58 23 4.8 No 5 0.78 Yes 0 0 No -21 0.46 No 38 78.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108238959 + NM_000051 ATM 0 . . . 5.6 80.09 26 5.1 No 74 -4.26 No 0 0 No -26 0.67 Yes 44 79.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23644716 - NM_024675 PALB2 0 . . . 4.93 76.68 26 5.31 No 70 0.42 No 0 0 No -24 0.87 Yes 37 80.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1219174 + NM_000455 STK11 0 . . . 4.96 81.86 21 4.79 No 55 0.4 No 0 0 No -20 0.86 Yes 44 62.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47717680 + NM_000251 MSH2 0 . . . 4.75 82.31 26 6.38 Yes 58 0.89 Yes 0 0 No -25 0.6 No 55 46.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37034809 + NM_000249 MLH1 0 . . . 5.47 81.08 26 6.4 Yes 12 1.45 Yes 0 0 No -20 0.74 Yes 46 92.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69115333 + NM_133509 RAD51B 0 . . . 1.65 68.92 80 5.73 Yes 19 -3.16 No 0 0 No -24 0.53 No 23 50.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68845687 + NM_133509 RAD51B 0 . . . 5.94 81.95 10 5.2 No 50 0.65 No 0 0 No -27 0.85 Yes 34 60.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23643787 - NM_024675 PALB2 0 . . . 4.1 75.07 15 5.72 Yes 11 1.43 Yes 0 0 No -26 0.67 Yes 47 45.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68741903 + NM_133509 RAD51B 0 . . . 2.38 80.25 14 4.53 No 58 0.2 No 0 0 No -21 0.81 Yes 51 65.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59908619 - NM_032043 BRIP1 0 . . . 5.23 84.62 13 4.61 No 33 0.39 No 0 0 No -23 0.66 Yes 48 80.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131961099 + NM_005732 RAD50 0 . . . 2.21 70.55 40 6.31 Yes 71 0.9 Yes 0 0 No -43 0.62 No 31 56.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89722209 + NM_000314 PTEN 0 . . . 1.69 73.83 20 5.1 No 64 -4.25 No 0 0 No -20 0.4 No 49 63.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108174353 + NM_000051 ATM 0 . . . 4.39 84.42 19 4.69 No 69 -6.06 No 0 0 No -18 0.89 Yes 43 89.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89621336 + NM_000314 PTEN 0 . . . 2.23 72.8 19 4.58 No 76 1.4 Yes 0 0 No -17 0.59 No 51 56.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68366761 + NM_133509 RAD51B 0 . . . 4.46 78.89 27 4.78 No 66 1.11 Yes 0 0 No -26 0.54 No 38 73.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131978301 + NM_005732 RAD50 0 . . . 0.32 0 20 4.69 No 36 1.31 Yes 0 0 No -19 0.65 No 22 92.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68799493 + NM_133509 RAD51B 0 . . . 8.56 92.32 21 4.97 No 9 0.21 No 0 0 No -20 0.75 Yes 52 37.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90997843 - NM_002485 NBN 0 . . . 4.6 84.17 26 4.53 No 42 1.39 Yes 0 0 No -25 0.89 Yes 21 60.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108214618 + NM_000051 ATM 0 . . . 3.28 69.37 32 5.63 Yes 52 0.46 No 0 0 No -22 0.28 No 47 68.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45798193 - NM_001048171 MUTYH 0 . . . 6.42 84.43 17 6.08 Yes 33 0.98 Yes 23 0.95 Yes -16 0.73 Yes 25 76.27 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr7 105202349 + NM_021930 RINT1 0 . . . 2.32 76.08 26 5.47 No 11 -2.73 No 0 0 No -25 0.42 No 48 48.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215662649 - NM_000465 BARD1 0 . . . 3.03 80.27 31 6.81 Yes 28 0.24 No 0 0 No -30 0.5 No 48 89.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68696283 + NM_133509 RAD51B 0 . . . 0.68 69.48 19 5.33 No 67 1 Yes 0 0 No -27 0.39 No 16 58.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104174813 - NM_001100119 XRCC3 0 . . . 1.54 72.84 16 5.43 No 38 -0.5 No 0 0 No -24 0.63 No 49 39.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90986056 - NM_002485 NBN 0 . . . 2.68 82.77 20 5.35 No 30 0.29 No 0 0 No -31 0.34 No 50 56.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75486726 - NM_001040108 MLH3 0 . . . 1.86 86.87 20 5.89 Yes 64 1.01 Yes 0 0 No -20 0.67 Yes 48 92.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68540050 + NM_133509 RAD51B 0 . . . 0.03 64.65 19 4.78 No 48 1.07 Yes 0 0 No -30 0.25 No 10 40.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68437231 + NM_133509 RAD51B 0 . . . 8.53 87.56 18 4.47 No 16 1.51 Yes 0 0 No -22 0.33 No 42 97.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68671564 + NM_133509 RAD51B 0 . . . 1.19 74.42 30 5.97 Yes 2 0.23 No 0 0 No -29 0.83 Yes 48 91.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215674524 - NM_000465 BARD1 0 . . . 1.46 68.54 35 5.44 No 28 0.31 No 0 0 No -28 0.66 No 49 24.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7571390 - NM_000546 TP53 0 . . . 5 66.01 15 3.89 No 3 -1.98 No 0 0 No -22 0.5 No 36 88.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75510835 - NM_001040108 MLH3 0 . . . 0.78 66.38 25 7.14 Yes 62 0.58 No 0 0 No -24 0.97 Yes 38 38.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69130784 + NM_133509 RAD51B 0 . . . 7.74 89.89 15 5.39 No 63 1.24 Yes 0 0 No -28 0.2 No 44 92.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29102806 - NM_001005735 CHEK2 0 . . . 1.16 81.31 41 7.28 Yes 0 0.62 No 0 0 No -40 0.69 Yes 28 39.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68863811 + NM_004360 CDH1 0 . . . 7.69 84.49 21 5.2 No 52 -2.22 No 0 0 No -21 0.58 No 43 88.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68808503 + NM_133509 RAD51B 0 . . . 6.76 85.84 21 5.2 No 66 0.09 No 0 0 No -20 0.91 Yes 47 83.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190737477 + NM_000534 PMS1 0 . . . 2.92 81.8 15 4.57 No 33 0.94 Yes 0 0 No -20 0.49 No 50 44.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68454816 + NM_133509 RAD51B 0 . . . 1.76 69.98 24 7.11 Yes 55 -4.12 No 0 0 No -21 0.62 No 46 66.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48023430 + NM_000179 MSH6 0 . . . 0.72 0 23 6 Yes 33 0.06 No 0 0 No -22 0.82 Yes 48 62.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47644726 + NM_000251 MSH2 0 . . . 3.6 74.78 21 3.82 No 60 1.1 Yes 0 0 No -20 0.65 No 52 55.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47631159 + NM_000251 MSH2 0 . . . 4.35 81.44 29 6.37 Yes 22 0.27 No 0 0 No -28 0.89 Yes 47 64.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68742030 + NM_133509 RAD51B 0 . . . 1.28 73.62 25 5.25 No 0 1.01 Yes 0 0 No -24 0.64 No 47 52.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68735967 + NM_133509 RAD51B 0 . . . 1.35 55.47 18 6.98 Yes 39 0.14 No 0 0 No -28 0.65 No 40 67.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68288754 + NM_133509 RAD51B 0 . . . 0.28 0 41 7.4 Yes 18 -2.03 No 0 0 No -23 0.91 Yes 54 67.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69149619 + NM_133509 RAD51B 0 . . . 4.21 59.9 28 6.47 Yes 48 0.79 Yes 31 0.85 Yes -27 0.82 Yes 36 98.03 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr17 59758348 - NM_032043 BRIP1 0 . . . 2.1 58.69 29 5.71 Yes 40 1.26 Yes 0 0 No -33 0.3 No 12 69.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68404650 + NM_133509 RAD51B 0 . . . 0.58 55.71 42 8.3 Yes 28 1.44 Yes 0 0 No -34 0.64 No 30 85.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40999052 + NM_001164269 RAD51 0 . . . 2.59 84.54 21 5.78 Yes 61 1.14 Yes 0 0 No -23 0.73 Yes 45 64.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59865463 - NM_032043 BRIP1 0 . . . 7.46 0 18 4.73 No 25 1.42 Yes 0 0 No -28 0.44 No 33 86.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90965230 - NM_002485 NBN 0 . . . 3.96 71.48 14 5.43 No 76 -4.98 No 0 0 No -25 0.31 No 37 43.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68865002 + NM_004360 CDH1 0 . . . 2.3 84.41 34 5.93 Yes 42 1.19 Yes 0 0 No -33 0.65 No 33 93.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32943306 + NM_000059 BRCA2 0 . . . 0.73 0 23 4.64 No 23 1.54 Yes 0 0 No -30 0.71 Yes 30 59.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56806598 + NM_058216 RAD51C 0 . . . 2.66 83.32 12 5.1 No 20 0.35 No 0 0 No -28 0.61 No 38 60.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75488157 - NM_001040108 MLH3 0 . . . 2.73 0 18 3.5 No 57 1.06 Yes 0 0 No -21 0.65 No 22 65.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68803496 + NM_133509 RAD51B 0 . . . 5.12 70.05 20 5.78 Yes 1 0.51 No 0 0 No -20 0.76 Yes 43 91.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32932957 + NM_000059 BRCA2 0 . . . 0.55 71.08 22 5.74 Yes 53 0.58 No 0 0 No -28 0.57 No 50 79.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68829721 + NM_004360 CDH1 0 . . . 9.19 87.19 23 4.56 No 2 1.64 Yes 0 0 No -22 0.69 Yes 43 80.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37053778 + NM_000249 MLH1 0 . . . 5.5 78.07 15 6.42 Yes 24 0.88 Yes 0 0 No -38 0.57 No 45 49.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59936044 - NM_032043 BRIP1 0 . . . 0.1 70.1 24 4.12 No 71 -3.75 No 0 0 No -23 0.51 No 38 65.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68423627 + NM_133509 RAD51B 0 . . . 0.57 72.74 15 4.52 No 24 0.42 No 0 0 No -19 0.37 No 46 83.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89629676 + NM_000314 PTEN 0 . . . 10.06 86.01 15 5.29 No 33 0.55 No 0 0 No -45 0.88 Yes 47 58.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45807301 - NM_001048171 MUTYH 0 . . . 8.43 74.17 65 7.42 Yes -1 0.51 No 0 0 No -28 0.64 No 54 30.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68833994 + NM_004360 CDH1 0 . . . 3.6 71.1 9 5.57 Yes 4 0.66 No 0 0 No -57 0.26 No 54 80.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94149710 - NM_005591 MRE11 0 . . . 8.52 81.56 27 4.76 No 69 0.95 Yes 0 0 No -25 0.4 No 46 75.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152363341 - NM_005431 XRCC2 0 . . . 0.59 74.03 65 7.36 Yes 69 -5.08 No 0 0 No -26 0.54 No 53 51.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68548940 + NM_133509 RAD51B 0 . . . 3.15 68.34 16 4.02 No 21 1.71 Yes 0 0 No -20 0.73 Yes 37 80.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89655847 + NM_000314 PTEN 0 . . . 2.55 0 22 5.1 No 28 1.01 Yes 0 0 No -21 0.47 No 53 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810412 + NM_004360 CDH1 0 . . . 1.62 69.79 30 5.88 Yes 1 0.47 No 0 0 No -22 0.43 No 51 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69019544 + NM_133509 RAD51B 0 . . . 1.18 0 17 5.28 No 41 0.48 No 0 0 No -21 0.91 Yes 17 79.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69117038 + NM_133509 RAD51B 0 . . . 4.91 82.96 12 5.39 No 29 1.93 Yes 0 0 No -24 0.31 No 44 52.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108101820 + NM_000051 ATM 0 . . . 4.83 70.16 25 5.34 No 73 0.79 Yes 0 0 No -22 0.65 No 34 92.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59914942 - NM_032043 BRIP1 0 . . . 1.58 0 51 7.27 Yes 62 0.55 No 0 0 No -50 0.6 No 47 56.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59933085 - NM_032043 BRIP1 0 . . . 2.95 79.8 21 4.8 No 59 -2.48 No 0 0 No -20 0.52 No 52 74.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47745588 + NM_000251 MSH2 0 . . . 2.24 61.07 26 7.2 Yes 46 1.19 Yes 0 0 No -25 0.29 No 35 90.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68753278 + NM_133509 RAD51B 0 . . . 9.27 89.94 14 5.39 No 39 0.36 No 0 0 No -22 0.36 No 47 94.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37037577 + NM_000249 MLH1 0 . . . 3.42 70.85 10 2.76 No 23 1.57 Yes 0 0 No -22 0.73 Yes 45 67.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68323597 + NM_133509 RAD51B 0 . . . 6.47 87.21 50 7 Yes 27 2.27 Yes 0 0 No -38 0.68 Yes 24 72.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41220129 - NM_007294 BRCA1 0 . . . 5.2 85.02 24 6.02 Yes 5 1.23 Yes 0 0 No -24 0.57 No 53 79.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94207887 - NM_005591 MRE11 0 . . . 4.05 73.55 20 4.44 No 14 1.05 Yes 0 0 No -27 0.82 Yes 44 71.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69088911 + NM_133509 RAD51B 0 . . . 6.7 83.22 31 5.84 Yes 32 -3.83 No 0 0 No -30 0.76 Yes 45 69.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41021060 + NM_001164269 RAD51 0 . . . 1.9 70.77 50 7.01 Yes 57 -4.32 No 0 0 No -49 0.54 No 50 51.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68322754 + NM_133509 RAD51B 0 . . . 3.47 68.78 26 3.68 No 35 1.14 Yes 0 0 No -25 0.89 Yes 31 40.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131957979 + NM_005732 RAD50 0 . . . 1.33 0 44 6.67 Yes 41 1.12 Yes 0 0 No -36 0.33 No 42 52.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69125896 + NM_133509 RAD51B 0 . . . 5.89 93.91 23 4.9 No 30 1.81 Yes 0 0 No -22 0.56 No 28 90.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21980371 - NM_000077 CDKN2A 0 . . . 10.74 91.22 38 5.9 Yes 26 0.44 No 0 0 No -35 0.85 Yes 40 81.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89669985 + NM_000314 PTEN 0 . . . 1.73 73.61 24 5.48 No 65 0.62 No 0 0 No -23 0.93 Yes 25 82.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41222784 - NM_007294 BRCA1 0 . . . 3.45 68.12 28 5.2 No 35 0.27 No 0 0 No -27 0.58 No 41 63.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190687171 + NM_000534 PMS1 0 . . . 3.58 64.06 18 6.51 Yes -2 0.92 Yes 0 0 No -39 0.61 No 35 74.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41015993 + NM_001164269 RAD51 0 . . . 2.51 82.62 24 6.48 Yes 11 0.57 No 0 0 No -23 0.71 Yes 39 55.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108205708 + NM_000051 ATM 0 . . . 0.3 71.69 20 5.57 Yes 34 1.89 Yes 0 0 No -19 0.69 Yes 24 66.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56809617 + NM_058216 RAD51C 0 . . . 1.61 79.3 33 6.15 Yes 65 0.66 No 0 0 No -36 0.69 Yes 40 90.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59813783 - NM_032043 BRIP1 0 . . . 2.29 71.18 14 5 No 8 0.72 No 0 0 No -47 0.88 Yes 39 71.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68679665 + NM_133509 RAD51B 0 . . . 4.28 79.55 52 6.1 Yes 10 0.69 No 0 0 No -33 0.62 No 45 65.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32927276 + NM_000059 BRCA2 0 . . . 6.93 86.22 30 5.65 Yes 64 0.48 No 0 0 No -29 0.85 Yes 25 80.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68877153 + NM_133509 RAD51B 0 . . . 3.43 68.95 62 8.16 Yes 30 0.77 No 0 0 No -34 0.73 Yes 43 89.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59798574 - NM_032043 BRIP1 0 . . . 3.97 65.99 31 6.93 Yes 5 1.35 Yes 0 0 No -31 0.8 Yes 37 46.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68319308 + NM_133509 RAD51B 0 . . . 5.51 81.79 22 5 No 4 0.57 No 0 0 No -22 0.47 No 42 50.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41242278 - NM_007294 BRCA1 0 . . . 1.33 0 26 5.86 Yes 54 -4.18 No 0 0 No -30 0.68 Yes 54 56.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68807713 + NM_004360 CDH1 0 . . . 6.83 84.51 22 4.9 No 73 -5.33 No 0 0 No -21 0.75 Yes 47 59.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131935080 + NM_005732 RAD50 0 . . . 4.86 77.25 14 5.71 Yes 5 0.56 No 0 0 No -26 0.78 Yes 50 87.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68675469 + NM_133509 RAD51B 0 . . . 10.34 82.69 26 5.89 Yes 5 1.27 Yes 0 0 No -25 0.83 Yes 47 83.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68860966 + NM_133509 RAD51B 0 . . . 5.2 66.87 34 7 Yes 25 1.14 Yes 0 0 No -29 0.61 No 33 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68920989 + NM_133509 RAD51B 0 . . . 5.99 74.91 31 7.06 Yes 15 0.7 No 0 0 No -21 0.58 No 43 80.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23620785 - NM_024675 PALB2 0 . . . 6.74 75.58 32 5.74 Yes -3 0.34 No 0 0 No -28 0.44 No 49 89.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68778009 + NM_133509 RAD51B 0 . . . 3.38 79.39 13 5.57 Yes 46 0.09 No 0 0 No -20 0.66 No 38 61.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68984139 + NM_133509 RAD51B 0 . . . 0.14 69.29 19 3.49 No -4 0.78 Yes 0 0 No -22 0.88 Yes 13 47.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131918530 + NM_005732 RAD50 0 . . . 6.65 82.23 24 5.93 Yes 46 0.63 No 0 0 No -23 0.78 Yes 50 48.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94203221 - NM_005591 MRE11 0 . . . 6.09 73.5 14 5.92 Yes 23 0.25 No 0 0 No -19 0.7 Yes 44 44.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68866474 + NM_004360 CDH1 0 . . . 0.09 74.68 13 5.26 No 4 0.41 No 0 0 No -23 0.53 No 54 67.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68832861 + NM_004360 CDH1 0 . . . 4.8 70.23 42 6.08 Yes 52 0.69 No 0 0 No -35 0.73 Yes 42 73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23636126 - NM_024675 PALB2 0 . . . 6.14 91.5 29 5.64 Yes 17 0.71 No 0 0 No -32 0.64 No 41 93.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68817449 + NM_133509 RAD51B 0 . . . 1.71 78.37 12 4.62 No 69 -3.54 No 0 0 No -19 0.45 No 42 61.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68767041 + NM_133509 RAD51B 0 . . . 2.01 80.65 18 5.66 Yes 47 1.58 Yes 0 0 No -31 0.5 No 51 65.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37070379 + NM_000249 MLH1 0 . . . 0.4 66.93 65 7.02 Yes -2 0.89 Yes 0 0 No -35 0.53 No 60 32.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68648260 + NM_133509 RAD51B 0 . . . 1.4 70.82 44 6.71 Yes 45 0.85 Yes 0 0 No -43 0.78 Yes 45 88.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131932435 + NM_005732 RAD50 0 . . . 2.57 67.4 32 7.37 Yes 53 -3.72 No 0 0 No -31 0.77 Yes 54 50.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68564774 + NM_133509 RAD51B 0 . . . 8.51 80.94 13 6.47 Yes 33 1.3 Yes 0 0 No -28 0.66 No 43 86.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68294337 + NM_133509 RAD51B 0 . . . 4.6 79.74 15 5.29 No 15 0.34 No 0 0 No -19 0.29 No 43 44.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59820841 - NM_032043 BRIP1 0 . . . 7.67 92.99 26 5.48 No 4 0.4 No 0 0 No -25 0.9 Yes 48 44.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190653029 + NM_000534 PMS1 0 . . . 4.38 79.72 16 4.14 No 70 -3.86 No 0 0 No -23 0.42 No 47 43.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69087782 + NM_133509 RAD51B 0 . . . 1.21 66.75 18 5.92 Yes 62 -4.47 No 0 0 No -30 0.71 Yes 43 32.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68368181 + NM_133509 RAD51B 0 . . . 2.89 75.65 20 7.14 Yes 58 0.43 No 0 0 No -19 0.59 No 41 83.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68344728 + NM_133509 RAD51B 0 . . . 7.85 83.99 18 4.9 No 5 0.29 No 0 0 No -23 0.89 Yes 53 62.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32923048 + NM_000059 BRCA2 0 . . . 6.09 79.29 54 7.35 Yes 30 -1.78 No 0 0 No -28 0.81 Yes 44 70.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37062101 + NM_000249 MLH1 0 . . . 5.83 74.84 28 4.61 No 10 1.03 Yes 0 0 No -23 0.7 Yes 48 83.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94182465 - NM_005591 MRE11 0 . . . 4.8 78.59 25 5.09 No 65 1.13 Yes 0 0 No -19 0.38 No 32 61.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59807181 - NM_032043 BRIP1 0 . . . 3.37 65.16 11 3.97 No 26 1.24 Yes 0 0 No -27 0.4 No 50 58.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68936967 + NM_133509 RAD51B 0 . . . 4.87 71.17 9 4.69 No 6 1.1 Yes 0 0 No -43 0.64 No 52 77.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59768668 - NM_032043 BRIP1 0 . . . 6.14 88.83 30 5.22 No 58 0.02 No 0 0 No -29 0.74 Yes 54 53.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69059273 + NM_133509 RAD51B 0 . . . 0.5 70.63 14 4.47 No 74 -5.3 No 0 0 No -23 0.61 No 59 16.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59919014 - NM_032043 BRIP1 0 . . . 2.78 0 53 5.98 Yes -2 0.78 Yes 0 0 No -48 0.41 No 51 90.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68698290 + NM_133509 RAD51B 0 . . . 6.61 68.08 34 7.93 Yes 56 0.51 No 0 0 No -33 0.96 Yes 48 50.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29086399 - NM_001005735 CHEK2 0 . . . 5.82 83.82 30 5.39 No 9 0.92 Yes 0 0 No -22 0.59 No 49 84.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108148903 + NM_000051 ATM 0 . . . 3.97 72.14 35 6.86 Yes -3 0.3 No 0 0 No -34 0.93 Yes 42 49.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41006850 + NM_001164269 RAD51 0 . . . 2 68.76 18 4.61 No 29 1.49 Yes 0 0 No -30 0.48 No 55 77.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68428739 + NM_133509 RAD51B 0 . . . 0.2 63.26 18 4.83 No 45 -2.44 No 0 0 No -25 0.87 Yes 45 51.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40989012 + NM_001164269 RAD51 0 . . . 3.24 75.31 42 5.37 No 9 0.78 Yes 0 0 No -30 0.72 Yes 43 70.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45793611 - NM_001048171 MUTYH 0 . . . 2.33 69.23 36 7.07 Yes 8 -0.41 No 0 0 No -32 0.62 No 50 89.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105181108 + NM_021930 RINT1 0 . . . 3.77 70.85 49 7.8 Yes 13 1.86 Yes 0 0 No -42 0.89 Yes 45 88.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68532312 + NM_133509 RAD51B 0 . . . 4.24 80.53 19 4.61 No 56 -0.34 No 0 0 No -19 0.28 No 51 55.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68443203 + NM_133509 RAD51B 0 . . . 3.97 75.24 35 6.07 Yes 56 1.44 Yes 0 0 No -34 0.61 No 31 45.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131955136 + NM_005732 RAD50 0 . . . 6.49 85.55 26 4.09 No 59 0.34 No 0 0 No -29 0.66 No 46 47.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108193220 + NM_000051 ATM 0 . . . 1.81 66.71 17 5.29 No 6 0.14 No 0 0 No -16 0.43 No 52 79.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84400214 - NM_139076 FAM175A 0 . . . 0.4 56.97 30 5.86 Yes 61 0.61 No 0 0 No -29 0.95 Yes 37 72.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68782844 + NM_004360 CDH1 0 . . . 3.37 68.95 28 5.29 No 16 1.11 Yes 0 0 No -27 0.36 No 42 90.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89657528 + NM_000314 PTEN 0 . . . 4.25 0 20 5.1 No 35 1.28 Yes 0 0 No -19 0.36 No 49 66.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47657061 + NM_000251 MSH2 0 . . . 3.72 83.84 100 12.55 Yes -1 0.41 No 0 0 No -31 0.34 No 46 34.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68635688 + NM_133509 RAD51B 0 . . . 8.86 96.54 17 4.8 No 7 0.23 No 0 0 No -19 0.49 No 37 63.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68889721 + NM_133509 RAD51B 0 . . . 8.99 87.81 36 4.55 No 27 0.74 No 0 0 No -35 0.93 Yes 44 56.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190704224 + NM_000534 PMS1 0 . . . 6.16 75.6 24 5.37 No 9 0.6 No 0 0 No -23 0.62 No 49 81.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69011546 + NM_133509 RAD51B 0 . . . 1.76 82.09 18 4.13 No 14 0.45 No 0 0 No -27 0.71 Yes 51 49.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69122050 + NM_133509 RAD51B 0 . . . 3.2 85.56 27 3.7 No 49 -2.79 No 0 0 No -26 0.66 No 53 84.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69013742 + NM_133509 RAD51B 0 . . . 4.3 76.24 33 6.15 Yes 18 1.1 Yes 0 0 No -32 0.46 No 40 72.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89678009 + NM_000314 PTEN 0 . . . 4.2 70.85 34 6.32 Yes 23 1.6 Yes 0 0 No -20 0.46 No 45 77.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190741524 + NM_000534 PMS1 0 . . . 0.71 83.92 22 5.46 No 75 0.88 Yes 0 0 No -21 0.95 Yes 40 85.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59806301 - NM_032043 BRIP1 0 . . . 8.5 79.78 9 5.1 No 32 0.96 Yes 0 0 No -27 0.75 Yes 26 70.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94155926 - NM_005591 MRE11 0 . . . 1.72 80.22 25 4.54 No 67 -4.96 No 0 0 No -25 0.68 Yes 43 45.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32937183 + NM_000059 BRCA2 0 . . . 0.89 68.59 19 4.69 No 66 1.23 Yes 0 0 No -18 0.64 No 45 86.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68286896 + NM_133509 RAD51B 0 . . . 0.15 0 11 5.39 No 55 1.62 Yes 0 0 No -31 0.66 No 37 19.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215662858 - NM_000465 BARD1 0 . . . 4.81 78.64 40 7.04 Yes 7 0.9 Yes 0 0 No -39 0.46 No 45 68.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68848658 + NM_133509 RAD51B 0 . . . 8.24 85.14 14 4.47 No 52 0.89 Yes 0 0 No -41 0.66 No 45 64.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190665289 + NM_000534 PMS1 0 . . . 0.58 63.56 12 3.55 No 17 0.61 No 0 0 No -23 0.3 No 49 79.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215659863 - NM_000465 BARD1 0 . . . 7.72 74.18 38 7.3 Yes 16 1.16 Yes 0 0 No -22 0.52 No 34 72.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68579542 + NM_133509 RAD51B 0 . . . 1.61 76.63 21 5.93 Yes 32 -2.64 No 0 0 No -30 0.46 No 61 37.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59839681 - NM_032043 BRIP1 0 . . . 0.05 67.19 22 4.8 No 72 0.61 No 0 0 No -24 0.4 No 46 77.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40995810 + NM_001164269 RAD51 0 . . . 3.88 71.16 27 5.2 No 32 0.46 No 0 0 No -26 0.66 No 42 78.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90983625 - NM_002485 NBN 0 . . . 1.61 62.53 24 6.04 Yes 5 -1.73 No 0 0 No -20 0.32 No 48 76.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68480870 + NM_133509 RAD51B 0 . . . 2.28 0 20 4.39 No 54 0.88 Yes 0 0 No -24 0.61 No 52 58.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108219266 + NM_000051 ATM 0 . . . 2.81 68.85 14 4.09 No 18 0.7 No 0 0 No -31 0.68 Yes 40 63.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47641024 + NM_000251 MSH2 0 . . . 5.16 85.02 24 5.17 No 34 1.45 Yes 0 0 No -23 0.62 No 44 63.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29087383 - NM_001005735 CHEK2 0 . . . 1.94 68.89 34 5.72 Yes 15 0.94 Yes 0 0 No -28 0.55 No 43 89.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68643109 + NM_133509 RAD51B 0 . . . 2.13 77.01 28 5.5 No 30 0.68 No 0 0 No -24 0.59 No 48 69.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47652480 + NM_000251 MSH2 0 . . . 6.47 80.27 23 5.19 No 16 0.69 No 0 0 No -43 0.61 No 43 65.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47661026 + NM_000251 MSH2 0 . . . 6.62 85.17 41 6.92 Yes -3 0.45 No 0 0 No -40 0.63 No 44 54.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59773351 - NM_032043 BRIP1 0 . . . 1.22 76.53 31 8.19 Yes 16 1.11 Yes 0 0 No -43 0.53 No 36 68.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89632413 + NM_000314 PTEN 0 . . . 7.54 82.82 32 5.71 Yes 1 1.15 Yes 0 0 No -32 0.37 No 42 68.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41210816 - NM_007294 BRCA1 0 . . . 5.75 77.36 23 4.9 No -1 1.88 Yes 0 0 No -47 0.53 No 42 63.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69084280 + NM_133509 RAD51B 0 . . . 10.06 78.82 19 4.8 No 59 -2.85 No 0 0 No -19 0.37 No 51 78.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68695088 + NM_133509 RAD51B 0 . . . 1.34 62.56 22 4.67 No 1 0.41 No 0 0 No -29 0.71 Yes 53 54.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108118367 + NM_000051 ATM 0 . . . 4.71 84.17 18 4.9 No 52 1.39 Yes 0 0 No -17 0.34 No 24 39.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69031662 + NM_133509 RAD51B 0 . . . 5.64 77.31 30 6.11 Yes 74 -2.05 No 0 0 No -29 0.67 Yes 48 90.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190724297 + NM_000534 PMS1 0 . . . 3.11 77.82 20 5.1 No -2 0.05 No 0 0 No -19 0.68 Yes 49 52.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68357118 + NM_133509 RAD51B 0 . . . 7.01 90 35 6.4 Yes 25 -1.47 No 0 0 No -34 0.54 No 40 66.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29095797 - NM_001005735 CHEK2 0 . . . 7.76 83.74 16 4.68 No 2 0.77 Yes 0 0 No -20 0.51 No 44 45.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21981618 - NM_000077 CDKN2A 0 . . . 4.1 0 23 6.56 Yes 53 0.14 No 0 0 No -22 0.89 Yes 43 30.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75516113 - NM_001040108 MLH3 0 . . . 3.19 78.54 50 8.9 Yes 17 -2.76 No 0 0 No -37 0.83 Yes 46 92.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69035398 + NM_133509 RAD51B 0 . . . 2.89 76.89 21 5.1 No 13 -1.41 No 0 0 No -20 0.84 Yes 45 54.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68779767 + NM_133509 RAD51B 0 . . . 3.96 75.55 44 6.57 Yes 4 0.34 No 0 0 No -32 0.92 Yes 42 58.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68815000 + NM_133509 RAD51B 0 . . . 1.09 70.41 19 5.33 No 62 0.8 Yes 0 0 No -23 0.59 No 54 43.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68813325 + NM_004360 CDH1 0 . . . 7.99 72.22 35 6.21 Yes 23 0.93 Yes 0 0 No -27 0.32 No 47 79.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94167338 - NM_005591 MRE11 0 . . . 8.08 87.21 29 7.34 Yes 6 0.11 No 0 0 No -28 0.95 Yes 45 58.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69125485 + NM_133509 RAD51B 0 . . . 2.48 66.52 32 5.81 Yes 22 0.76 No 0 0 No -26 0.85 Yes 42 62.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190732574 + NM_000534 PMS1 0 . . . 0.66 63.21 31 5.73 Yes 51 0.74 No 0 0 No -30 0.89 Yes 44 52.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68845299 + NM_133509 RAD51B 0 . . . 7.45 78.48 31 5.64 Yes 24 0.59 No 0 0 No -27 0.63 No 38 51.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59934135 - NM_032043 BRIP1 0 . . . 3.58 74.3 18 5.34 No 1 0.77 No 0 0 No -25 0.59 No 43 63.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75494346 - NM_001040108 MLH3 0 . . . 1.15 67.6 22 5.08 No 58 0.4 No 0 0 No -21 0.73 Yes 13 34.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68984067 + NM_133509 RAD51B 0 . . . 10.68 75.51 59 7.68 Yes 8 0.58 No 0 0 No -25 0.59 No 47 60.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47693284 + NM_000251 MSH2 0 . . . 0.77 74.89 16 4.69 No 70 1.12 Yes 0 0 No -24 0.55 No 46 62.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68904165 + NM_133509 RAD51B 0 . . . 6.03 81.81 22 4.48 No 58 1.04 Yes 0 0 No -19 0.74 Yes 44 72.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59937331 - NM_032043 BRIP1 0 . . . 8.15 83 17 3.89 No 19 1.35 Yes 0 0 No -22 0.3 No 39 94.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131911207 + NM_005732 RAD50 0 . . . 5.31 87.8 23 5.65 Yes -2 0.05 No 0 0 No -26 0.5 No 41 53.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674262 + NM_000251 MSH2 0 . . . 5.42 78.03 19 3.98 No 47 0.49 No 0 0 No -19 0.63 No 48 49.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68757960 + NM_133509 RAD51B 0 . . . 6.3 93.6 35 5.58 Yes 44 0.69 No 0 0 No -28 0.5 No 14 58.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68967994 + NM_133509 RAD51B 0 . . . 9.01 89.94 24 4.79 No 31 0.7 No 0 0 No -23 0.44 No 49 54.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68837380 + NM_133509 RAD51B 0 . . . 1.25 63.58 71 8.09 Yes 69 -5.6 No 0 0 No -41 0.61 No 49 80.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108121061 + NM_000051 ATM 0 . . . 3.6 85.02 28 6.67 Yes 4 1.2 Yes 0 0 No -27 0.92 Yes 54 68.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59928586 - NM_032043 BRIP1 0 . . . 4.86 83 25 9.66 Yes 40 0.48 No 0 0 No -25 0.32 No 42 65.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47651555 + NM_000251 MSH2 0 . . . 2.24 80.12 14 5.59 Yes 7 1.16 Yes 0 0 No -25 0.92 Yes 51 78.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68906341 + NM_133509 RAD51B 0 . . . 9.07 84.02 10 3.34 No 69 0.58 No 0 0 No -19 0.43 No 48 71.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68957304 + NM_133509 RAD51B 0 . . . 6.26 80.98 31 6 Yes 6 2.19 Yes 0 0 No -31 0.42 No 40 82.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152352984 - NM_005431 XRCC2 0 . . . 0.69 0 16 4.21 No 53 1.46 Yes 0 0 No -35 0.58 No 45 44.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69091048 + NM_133509 RAD51B 0 . . . 1.54 69.7 22 4.5 No 14 1.08 Yes 0 0 No -21 0.66 Yes 54 72.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68906847 + NM_133509 RAD51B 0 . . . 3.14 72.98 24 5.03 No 17 1.65 Yes 0 0 No -23 0.57 No 40 79.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69109405 + NM_133509 RAD51B 0 . . . 4.13 0 26 5.99 Yes 67 0.92 Yes 0 0 No -30 0.59 No 42 78.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47657491 + NM_000251 MSH2 0 . . . 0.8 75.83 29 4.93 No 57 1.5 Yes 0 0 No -20 0.36 No 45 55.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131958394 + NM_005732 RAD50 0 . . . 3.14 82.24 16 5.83 Yes 45 0.53 No 0 0 No -18 0.7 Yes 47 52.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48030636 + NM_000179 MSH6 0 . . . 0.64 73.11 28 4.4 No 4 0.98 Yes 0 0 No -27 0.43 No 54 56.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68815867 + NM_133509 RAD51B 0 . . . 10.58 91.7 28 5.2 No 67 0.58 No 0 0 No -23 0.74 Yes 43 77.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32960838 + NM_000059 BRCA2 0 . . . 3.89 78.38 19 4.31 No 6 1.32 Yes 0 0 No -27 0.32 No 45 85.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56775397 + NM_058216 RAD51C 0 . . . 2.75 0 30 5.42 No 74 0.86 Yes 0 0 No -20 0.33 No 46 73.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75484325 - NM_001040108 MLH3 0 . . . 2.71 81.25 34 4.88 No 5 1 Yes 0 0 No -27 0.93 Yes 40 55.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41002868 + NM_001164269 RAD51 0 . . . 8.37 89.38 15 4.34 No 10 1.05 Yes 0 0 No -17 0.71 Yes 41 82.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59879415 - NM_032043 BRIP1 0 . . . 0.91 68.39 35 6.67 Yes 51 -1.29 No 0 0 No -24 0.72 Yes 49 70.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190716355 + NM_000534 PMS1 0 . . . 2.26 81.28 22 4.89 No 54 1.33 Yes 0 0 No -21 0.87 Yes 52 38.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68802813 + NM_004360 CDH1 0 . . . 8.37 83.38 37 6.79 Yes 66 0.73 No 0 0 No -30 0.56 No 37 78.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190709765 + NM_000534 PMS1 0 . . . 4.93 85.02 12 3.99 No 60 1.41 Yes 0 0 No -26 0.8 Yes 54 64.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68976973 + NM_133509 RAD51B 0 . . . 5.24 84.61 19 7.33 Yes -2 0.51 No 0 0 No -18 0.41 No 51 49.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47664084 + NM_000251 MSH2 0 . . . 1.56 0 55 7.27 Yes 62 -5.74 No 0 0 No -24 0.47 No 39 57.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68923231 + NM_133509 RAD51B 0 . . . 3.41 69.37 35 5.36 No 58 -3.59 No 0 0 No -22 0.3 No 52 23.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47735374 + NM_000251 MSH2 0 . . . 2.43 75.93 25 5.19 No 64 0.9 Yes 0 0 No -27 0.41 No 41 68.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190736707 + NM_000534 PMS1 0 . . . 1.53 73.96 20 7.07 Yes 72 -3.78 No 0 0 No -29 0.64 No 50 30.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48032151 + NM_000179 MSH6 0 . . . 1.24 77.6 25 5.77 Yes 28 0.36 No 0 0 No -28 0.82 Yes 51 65.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152364391 - NM_005431 XRCC2 0 . . . 2.75 86.79 18 4.71 No 31 1.41 Yes 0 0 No -28 0.29 No 50 77.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68829846 + NM_133509 RAD51B 0 . . . 3.36 76.28 32 5.72 Yes 44 -0.59 No 0 0 No -31 0.57 No 48 40.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105186157 + NM_021930 RINT1 0 . . . 1.35 79.69 31 5.57 Yes 21 0.55 No 0 0 No -30 0.75 Yes 50 63.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108153471 + NM_000051 ATM 0 . . . 2.47 74.85 30 5.21 No 41 1.36 Yes 0 0 No -29 0.51 No 42 54.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59837238 - NM_032043 BRIP1 0 . . . 7.55 74.09 25 5.1 No 36 -1.75 No 0 0 No -24 0.68 Yes 34 41.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59933561 - NM_032043 BRIP1 0 . . . 3.03 74.69 23 4.8 No 46 -3.76 No 0 0 No -49 0.61 No 51 48.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108136677 + NM_000051 ATM 0 . . . 2.71 76.12 29 6.78 Yes 47 -3.1 No 0 0 No -28 0.55 No 47 51.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90946350 - NM_002485 NBN 0 . . . 0.41 0 19 4.46 No 67 -3.83 No 0 0 No -18 0.79 Yes 45 45.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41024805 + NM_001164269 RAD51 0 . . . 1.5 70.54 26 5 No 58 1.32 Yes 0 0 No -25 0.82 Yes 15 70.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215620567 - NM_000465 BARD1 0 . . . 2.64 70.47 22 4.77 No 3 0.64 No 0 0 No -19 0.61 No 35 59.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41239236 - NM_007294 BRCA1 0 . . . 1.16 67.26 19 4.23 No 69 1.1 Yes 0 0 No -21 0.9 Yes 54 64.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37067248 + NM_000249 MLH1 0 . . . 1.18 76.39 37 6.92 Yes 49 2.24 Yes 0 0 No -36 0.57 No 52 48.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68522703 + NM_133509 RAD51B 0 . . . 7.95 92.78 36 5.75 Yes 50 -1.81 No 0 0 No -25 0.61 No 43 92.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89724848 + NM_000314 PTEN 0 . . . 0.04 0 23 6.24 Yes 12 1.07 Yes 0 0 No -22 0.88 Yes 46 54.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131919060 + NM_005732 RAD50 0 . . . 8.13 82.08 29 4.75 No 21 1.22 Yes 0 0 No -32 0.42 No 44 47.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90967190 - NM_002485 NBN 0 . . . 12.95 82.29 23 8.31 Yes 57 2.11 Yes 0 0 No -22 0.62 No 47 68.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59845611 - NM_032043 BRIP1 0 . . . 6.55 72.52 21 5.65 Yes 46 0.12 No 0 0 No -20 0.67 Yes 38 65.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68477921 + NM_133509 RAD51B 0 . . . 3.97 80.19 20 5.45 No 61 1.15 Yes 0 0 No -28 0.51 No 39 62.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41004150 + NM_001164269 RAD51 0 . . . 3.74 69.51 27 5.39 No 19 -2.57 No 0 0 No -29 0.59 No 46 61.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68413541 + NM_133509 RAD51B 0 . . . 3.88 67.68 18 4.7 No 71 -3.79 No 0 0 No -49 0.38 No 35 87.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6046557 - NM_000535 PMS2 0 . . . 4.63 61.3 24 5.48 No 38 0.31 No 0 0 No -23 0.78 Yes 45 80.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41221642 - NM_007294 BRCA1 0 . . . 5.23 75.62 30 5.65 Yes 1 0.65 No 0 0 No -28 0.24 No 39 79.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105171609 + NM_021930 RINT1 0 . . . 4.61 86.84 26 3.86 No 75 0.26 No 0 0 No -28 0.85 Yes 15 57.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41197274 - NM_007294 BRCA1 0 . . . 3.41 76.23 36 6.17 Yes 21 1.07 Yes 0 0 No -38 0.45 No 42 75.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68304732 + NM_133509 RAD51B 0 . . . 3.51 75.49 29 5.49 No 50 2.1 Yes 0 0 No -49 0.6 No 24 62.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89709770 + NM_000314 PTEN 0 . . . 0.09 74.68 29 6.32 Yes 50 0.99 Yes 0 0 No -28 0.85 Yes 54 80.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47654265 + NM_000251 MSH2 0 . . . 1.63 65.48 50 7.83 Yes 57 0.92 Yes 0 0 No -30 0.42 No 53 51.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47773465 + NM_000251 MSH2 0 . . . 3.29 73.82 29 5.39 No 38 0.16 No 0 0 No -28 0.33 No 46 75.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29088917 - NM_001005735 CHEK2 0 . . . 0.26 77.57 37 6.93 Yes 69 -4.18 No 0 0 No -28 0.83 Yes 60 76.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68975598 + NM_133509 RAD51B 0 . . . 3.09 74.74 43 8.5 Yes 70 0.31 No 0 0 No -31 0.37 No 50 48.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56812318 + NM_058216 RAD51C 0 . . . 0.27 65.02 22 6.63 Yes 11 0.68 No 0 0 No -21 0.78 Yes 34 57.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90949199 - NM_002485 NBN 0 . . . 1.27 61.93 18 4.58 No 56 1.35 Yes 0 0 No -17 0.55 No 29 57.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69118639 + NM_133509 RAD51B 0 . . . 3.05 67.51 14 6.08 Yes 74 1.41 Yes 0 0 No -26 0.45 No 41 83.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47730815 + NM_000251 MSH2 0 . . . 4.7 73.2 34 6.42 Yes 20 -0.59 No 0 0 No -22 0.38 No 38 67.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68493415 + NM_133509 RAD51B 0 . . . 7.87 72.37 23 5.9 Yes 24 1.83 Yes 0 0 No -22 0.57 No 34 85.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108228003 + NM_000051 ATM 0 . . . 4.11 81.58 27 5.81 Yes 58 0.63 No 0 0 No -26 0.77 Yes 51 47.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41208612 - NM_007294 BRCA1 0 . . . 3.37 87.98 24 4.12 No 53 1.45 Yes 0 0 No -23 0.45 No 48 93.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215660950 - NM_000465 BARD1 0 . . . 7.4 84.38 21 5 No 67 0.71 No 0 0 No -20 0.23 No 31 50.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59772891 - NM_032043 BRIP1 0 . . . 0.84 64.42 17 6.08 Yes 1 0.23 No 0 0 No -16 0.72 Yes 45 41.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68737566 + NM_133509 RAD51B 0 . . . 0.07 71.44 14 4.47 No 64 0.86 Yes 0 0 No -40 0.6 No 24 82.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215612857 - NM_000465 BARD1 0 . . . 4.1 71.15 17 4.8 No 19 0.56 No 0 0 No -36 0.46 No 39 84.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32967750 + NM_000059 BRCA2 0 . . . 7.97 73.34 29 4.1 No 61 0.57 No 0 0 No -28 0.58 No 47 81.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108218555 + NM_000051 ATM 0 . . . 6.4 71.83 15 4 No 20 0.19 No 0 0 No -31 0.84 Yes 38 81.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68904630 + NM_133509 RAD51B 0 . . . 6.18 79.81 32 4.41 No 76 -3.55 No 0 0 No -25 0.5 No 43 72.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47757919 + NM_000251 MSH2 0 . . . 3.15 67.18 14 3.74 No 56 1.03 Yes 0 0 No -22 0.7 Yes 33 51.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68973700 + NM_133509 RAD51B 0 . . . 3.04 74.33 16 6.14 Yes 8 0.3 No 0 0 No -33 0.56 No 47 50.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68951047 + NM_133509 RAD51B 0 . . . 2.84 63.32 18 7 Yes 33 0.97 Yes 0 0 No -30 0.43 No 47 70.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68848941 + NM_133509 RAD51B 0 . . . 0.13 67.47 15 5.81 Yes 75 1.67 Yes 0 0 No -52 0.39 No 45 75.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47731130 + NM_000251 MSH2 0 . . . 0.9 75.42 12 5.17 No 53 -1.72 No 0 0 No -25 0.24 No 32 32.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47678792 + NM_000251 MSH2 0 . . . 0.2 0 25 5.39 No 52 0.56 No 0 0 No -22 0.72 Yes 30 25.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41023678 + NM_001164269 RAD51 0 . . . 0.51 63.1 21 5.09 No 73 1.1 Yes 0 0 No -20 0.72 Yes 47 80.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108175259 + NM_000051 ATM 0 . . . 8.78 85.07 13 4.36 No 15 1.21 Yes 0 0 No -25 0.61 No 43 94.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90989862 - NM_002485 NBN 0 . . . 3.31 74.6 15 5 No -2 0.05 No 0 0 No -24 0.96 Yes 60 50.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68863071 + NM_133509 RAD51B 0 . . . 6.03 88.59 24 4.31 No 3 1.65 Yes 0 0 No -29 0.67 Yes 47 72.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190658735 + NM_000534 PMS1 0 . . . 0.18 78.49 19 5.74 Yes 13 1.67 Yes 0 0 No -18 0.88 Yes 45 78.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68828610 + NM_004360 CDH1 0 . . . 4.74 84.41 19 5 No 12 2.13 Yes 0 0 No -18 0.58 No 46 95.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89681879 + NM_000314 PTEN 0 . . . 4.28 71.39 28 5.7 Yes 12 0.39 No 0 0 No -27 0.78 Yes 46 83.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69066307 + NM_133509 RAD51B 0 . . . 6.68 76.44 31 3.61 No 3 1.13 Yes 0 0 No -34 0.68 Yes 37 56.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68860229 + NM_133509 RAD51B 0 . . . 1.35 84.66 15 5.88 Yes 26 0.6 No 0 0 No -28 0.76 Yes 50 84.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68397846 + NM_133509 RAD51B 0 . . . 1.42 72.26 22 4.19 No 31 1.27 Yes 0 0 No -25 0.62 No 27 90.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108099472 + NM_000051 ATM 0 . . . 1.07 0 25 6.22 Yes 68 1.26 Yes 0 0 No -33 0.62 No 34 65.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108174686 + NM_000051 ATM 0 . . . 2.49 65.46 22 4.58 No 24 0.98 Yes 0 0 No -21 0.6 No 34 85.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94166414 - NM_005591 MRE11 0 . . . 3.45 79.13 46 5.66 Yes 21 0.44 No 0 0 No -21 0.77 Yes 47 94.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37090987 + NM_000249 MLH1 0 . . . 3.4 0 27 5.2 No 16 1.82 Yes 0 0 No -26 0.69 Yes 42 85.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68820510 + NM_133509 RAD51B 0 . . . 3.16 74.13 13 4.87 No 68 1.12 Yes 0 0 No -37 0.58 No 41 56.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21977223 - NM_000077 CDKN2A 0 . . . 5.69 77.17 36 5.75 Yes 15 0.49 No 0 0 No -25 0.53 No 43 77.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29136181 - NM_001005735 CHEK2 0 . . . 0.1 0 14 5.29 No 49 0.07 No 0 0 No -39 0.74 Yes 49 70.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68464670 + NM_133509 RAD51B 0 . . . 4.94 79.93 28 5.83 Yes 21 0.94 Yes 0 0 No -27 0.67 Yes 37 45.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47683500 + NM_000251 MSH2 0 . . . 5.16 84.49 31 5.78 Yes 74 -3.06 No 0 0 No -30 0.56 No 51 88.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68446746 + NM_133509 RAD51B 0 . . . 0.9 0 28 5.57 Yes 34 0.99 Yes 0 0 No -27 0.53 No 46 46.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94191741 - NM_005591 MRE11 0 . . . 0.19 60.03 15 6.32 Yes 28 0.42 No 0 0 No -19 0.36 No 42 75.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47672825 + NM_000251 MSH2 0 . . . 0.93 78.27 16 3.66 No 52 -3.23 No 0 0 No -25 0.68 Yes 47 70.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89712380 + NM_000314 PTEN 0 . . . 4.51 85.28 15 5.39 No 51 -3.34 No 0 0 No -25 0.35 No 51 70.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69145948 + NM_133509 RAD51B 0 . . . 5.86 71.81 21 4.69 No 8 0.15 No 0 0 No -24 0.39 No 44 74.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52435355 - NM_004656 BAP1 0 . . . 4.41 83.55 27 5.09 No 8 1.28 Yes 0 0 No -26 0.77 Yes 50 81.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41259374 - NM_007294 BRCA1 0 . . . 0.97 71.54 29 5.57 Yes 70 0.25 No 0 0 No -28 0.91 Yes 47 42.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190683581 + NM_000534 PMS1 0 . . . 7.71 82.9 18 4.69 No 11 0.52 No 0 0 No -17 0.76 Yes 47 67.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89697460 + NM_000314 PTEN 0 . . . 2.98 76.35 26 5.29 No 42 -3.54 No 0 0 No -25 0.87 Yes 55 42.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68378781 + NM_133509 RAD51B 0 . . . 3.67 74.77 28 5.7 Yes 65 -2.61 No 0 0 No -31 0.66 No 45 87.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48013964 + NM_000179 MSH6 0 . . . 3.05 70.28 47 7.52 Yes 35 0.42 No 0 0 No -29 0.89 Yes 41 65.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68871669 + NM_133509 RAD51B 0 . . . 3.7 76.45 46 6.16 Yes 55 0.86 Yes 0 0 No -20 0.81 Yes 49 66.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131926636 + NM_005732 RAD50 0 . . . 6.16 71.03 40 6.13 Yes 2 1.57 Yes 0 0 No -24 0.48 No 52 59.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56783513 + NM_058216 RAD51C 0 . . . 4.37 86.92 20 6.04 Yes 4 0.9 Yes 0 0 No -32 0.62 No 47 94.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21967475 - NM_000077 CDKN2A 0 . . . 11.55 88.07 25 5.08 No 73 -3.3 No 0 0 No -24 0.86 Yes 51 83.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68946131 + NM_133509 RAD51B 0 . . . 6.52 83.05 17 4.79 No 9 2.04 Yes 0 0 No -21 0.74 Yes 38 79.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68817600 + NM_004360 CDH1 0 . . . 1.01 83.28 23 4.6 No 18 1.6 Yes 0 0 No -21 0.58 No 40 96.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215598866 - NM_000465 BARD1 0 . . . 7.52 88.71 20 4.83 No 45 0.42 No 0 0 No -42 0.56 No 41 61.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37073547 + NM_000249 MLH1 0 . . . 2.45 70.69 35 5.92 Yes 36 1.35 Yes 0 0 No -34 0.6 No 43 75.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190706776 + NM_000534 PMS1 0 . . . 0.32 0 38 6.55 Yes 44 0.44 No 0 0 No -36 0.84 Yes 39 80.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59910595 - NM_032043 BRIP1 0 . . . 0.27 68.15 30 5.1 No 3 0.39 No 0 0 No -23 0.66 No 55 31.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32940014 + NM_000059 BRCA2 0 . . . 9.5 84.84 15 4.72 No 12 0.7 No 0 0 No -45 0.51 No 46 46.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68438022 + NM_133509 RAD51B 0 . . . 3.93 73.91 32 5.53 No 18 0.42 No 0 0 No -26 0.62 No 40 69.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108228475 + NM_000051 ATM 0 . . . 1.94 79.69 53 8.69 Yes 8 0.3 No 0 0 No -56 0.28 No 45 70.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32948049 + NM_000059 BRCA2 0 . . . 1.47 75.49 105 9.71 Yes 62 1.52 Yes 0 0 No -32 0.25 No 33 79.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69090555 + NM_133509 RAD51B 0 . . . 2.86 71.18 17 4.69 No 32 0.97 Yes 0 0 No -16 0.51 No 40 63.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105203646 + NM_021930 RINT1 0 . . . 1.52 71.11 15 4.58 No 12 0.16 No 0 0 No -31 0.32 No 31 59.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59824309 - NM_032043 BRIP1 0 . . . 2.96 73.54 20 7.05 Yes 11 0.75 No 0 0 No -19 0.65 No 47 81.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47711355 + NM_000251 MSH2 0 . . . 0.02 56.87 24 5.48 No 71 0.49 No 0 0 No -23 0.64 No 51 40.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69001978 + NM_133509 RAD51B 0 . . . 0.68 64.84 15 5.29 No -2 0.35 No 0 0 No -28 0.52 No 40 36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68390226 + NM_133509 RAD51B 0 . . . 4.33 87.07 37 7.48 Yes 32 1.14 Yes 0 0 No -44 0.45 No 42 55.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215609786 - NM_000465 BARD1 0 . . . 0.4 59.38 33 6.33 Yes 53 -4.45 No 0 0 No -32 0.67 Yes 37 65.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68357209 + NM_133509 RAD51B 0 . . . 3.86 0 25 5.19 No 35 1.16 Yes 0 0 No -24 0.96 Yes 38 71.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68981278 + NM_133509 RAD51B 0 . . . 4.75 69.34 16 4.68 No 17 0.72 No 0 0 No -19 0.74 Yes 41 86.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69099039 + NM_133509 RAD51B 0 . . . 7.3 88.6 48 5.51 No 38 1.97 Yes 0 0 No -22 0.61 No 50 54.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215596505 - NM_000465 BARD1 0 . . . 0.73 60.89 17 5.37 No 47 0.68 No 0 0 No -22 0.5 No 45 75.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108195557 + NM_000051 ATM 0 . . . 2.66 70.83 22 4.11 No 47 0.72 No 0 0 No -21 0.62 No 44 59.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215675441 - NM_000465 BARD1 0 . . . 1.63 72.74 28 5.74 Yes 35 -4.32 No 0 0 No -27 0.57 No 53 24.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94224900 - NM_005591 MRE11 0 . . . 1.43 67.83 13 4.21 No 17 -2.18 No 0 0 No -23 0.57 No 49 49.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215675208 - NM_000465 BARD1 0 . . . 1.14 70.23 16 5.2 No 54 0.99 Yes 0 0 No -20 0.45 No 50 78.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89628437 + NM_000314 PTEN 0 . . . 4.36 80.94 21 5.49 No 21 0.05 No 0 0 No -20 0.8 Yes 48 59.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68502518 + NM_133509 RAD51B 0 . . . 3.4 83.5 38 4.63 No 12 1.5 Yes 0 0 No -16 0.74 Yes 38 53.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108177776 + NM_000051 ATM 0 . . . 5.36 91.63 16 2.25 No 63 1.02 Yes 0 0 No -34 0.53 No 42 47.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68635005 + NM_133509 RAD51B 0 . . . 1.32 66.96 27 5.29 No 32 -2.38 No 0 0 No -51 0.61 No 43 55.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68873784 + NM_133509 RAD51B 0 . . . 2.98 0 23 7.35 Yes 73 0.78 Yes 0 0 No -22 0.81 Yes 15 39.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69121223 + NM_133509 RAD51B 0 . . . 1.28 0 15 4.58 No 14 1.28 Yes 0 0 No -33 0.66 Yes 44 79.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52438992 - NM_004656 BAP1 0 . . . 4.3 69.57 38 5.98 Yes 33 -2.4 No 0 0 No -32 0.83 Yes 46 30.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108103448 + NM_000051 ATM 0 . . . 4.04 85.02 32 6 Yes 4 0.6 No 0 0 No -31 0.72 Yes 43 55.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21987027 - NM_000077 CDKN2A 0 . . . 4.32 71.27 18 3.82 No -3 0.89 Yes 0 0 No -29 0.56 No 45 81.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68798784 + NM_004360 CDH1 0 . . . 3.19 75.75 65 6.65 Yes 57 1.52 Yes 0 0 No -28 0.63 No 48 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41220126 - NM_007294 BRCA1 0 . . . 3.25 80.12 36 5.16 No 8 1.2 Yes 0 0 No -20 0.87 Yes 50 86.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56811759 + NM_058216 RAD51C 0 . . . 0.39 84.13 30 4.24 No 6 0.25 No 0 0 No -29 0.78 Yes 38 25.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215653940 - NM_000465 BARD1 0 . . . 4.57 64.99 28 7.28 Yes 46 -3.95 No 0 0 No -27 0.95 Yes 41 76.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68950721 + NM_133509 RAD51B 0 . . . 2.03 0 13 5.47 No 50 0.65 No 0 0 No -23 0.78 Yes 49 43.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215669139 - NM_000465 BARD1 0 . . . 1.98 0 59 7.74 Yes 17 1.15 Yes 0 0 No -44 0.73 Yes 41 65.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69124802 + NM_133509 RAD51B 0 . . . 0.89 70.26 17 5.91 Yes 51 0.97 Yes 0 0 No -16 0.39 No 46 77.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68475807 + NM_133509 RAD51B 0 . . . 2.22 0 28 5.31 No 63 0.46 No 0 0 No -27 0.86 Yes 41 46.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215593441 - NM_000465 BARD1 0 . . . 0.34 0 40 6.4 Yes 51 0.41 No 0 0 No -30 0.7 Yes 57 47.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75481499 - NM_001040108 MLH3 0 . . . 7.3 84.54 17 5.37 No 6 0.38 No 0 0 No -39 0.23 No 45 79.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89718054 + NM_000314 PTEN 0 . . . 8.05 85.65 33 5.51 No 73 0.49 No 0 0 No -25 0.66 No 45 79.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89719234 + NM_000314 PTEN 0 . . . 7.81 86.44 18 5.37 No 5 1.61 Yes 0 0 No -25 0.69 Yes 47 40.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59776593 - NM_032043 BRIP1 0 . . . 2.76 73.52 25 4.41 No 47 0.6 No 0 0 No -27 0.52 No 34 42.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131971655 + NM_005732 RAD50 0 . . . 4.96 81.89 16 4.58 No 35 0.02 No 0 0 No -21 0.28 No 50 33.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108103908 + NM_000051 ATM 0 . . . 5.56 81.49 14 4.16 No 69 0.82 Yes 0 0 No -22 0.72 Yes 46 82.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215670986 - NM_000465 BARD1 0 . . . 3.21 0 16 4.69 No 9 0.96 Yes 0 0 No -45 0.44 No 40 66.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75510277 - NM_001040108 MLH3 0 . . . 1.88 72.08 65 7.54 Yes 23 1.5 Yes 0 0 No -35 0.62 No 28 88.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69003845 + NM_133509 RAD51B 0 . . . 2.57 67.2 27 3.84 No 44 0.41 No 0 0 No -21 0.38 No 55 22.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68883718 + NM_133509 RAD51B 0 . . . 8.57 93.84 10 5.02 No 66 1.03 Yes 0 0 No -25 0.58 No 52 42.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7591852 - NM_000546 TP53 0 . . . 4.57 75.8 29 5.48 No 27 0.47 No 0 0 No -28 0.9 Yes 31 61.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68648722 + NM_133509 RAD51B 0 . . . 3.68 72.5 38 6.66 Yes 65 -2.28 No 0 0 No -32 0.53 No 41 42.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68641262 + NM_133509 RAD51B 0 . . . 0.75 66.59 15 4.58 No 4 0.77 No 0 0 No -14 0.44 No 42 80.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215643446 - NM_000465 BARD1 0 . . . 4.92 71.77 18 3.66 No 28 0.61 No 0 0 No -23 0.88 Yes 47 77.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104170400 - NM_001100119 XRCC3 0 . . . 5.03 78.75 21 5.01 No 5 0.1 No 0 0 No -20 0.66 Yes 53 54.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41273365 - NM_007294 BRCA1 0 . . . 4.18 76.52 51 7.36 Yes 60 0.58 No 0 0 No -24 0.72 Yes 11 37.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45802275 - NM_001048171 MUTYH 0 . . . 2.72 82.77 21 5.53 No 37 -2.1 No 0 0 No -20 0.71 Yes 48 49.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68989702 + NM_133509 RAD51B 0 . . . 0.98 61.47 30 6.53 Yes 27 -3.22 No 0 0 No -29 0.92 Yes 32 29.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89671796 + NM_000314 PTEN 0 . . . 3.08 82.56 20 4.78 No 34 1.08 Yes 0 0 No -28 0.57 No 50 63.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47694041 + NM_000251 MSH2 0 . . . 1.13 77.2 41 6.38 Yes 56 1.47 Yes 0 0 No -19 0.4 No 48 43.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21972777 - NM_000077 CDKN2A 0 . . . 2.08 80.41 10 3.22 No 47 0.55 No 0 0 No -44 0.36 No 44 41.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68469391 + NM_133509 RAD51B 0 . . . 1.66 75.78 17 5.42 No 45 0.43 No 0 0 No -26 0.54 No 49 49.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45796730 - NM_001048171 MUTYH 0 . . . 2.8 84.95 25 4.9 No 48 -1.09 No 0 0 No -21 0.45 No 44 65.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59767585 - NM_032043 BRIP1 0 . . . 5.57 73.11 18 4.89 No 56 0.31 No 0 0 No -29 0.31 No 48 55.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33442576 - NM_002878 RAD51D 0 . . . 6.99 72.4 17 5.29 No 36 0.32 No 0 0 No -59 0.32 No 42 72.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41022903 + NM_001164269 RAD51 0 . . . 5.12 85.02 74 8.79 Yes 6 1.26 Yes 0 0 No -28 0.71 Yes 52 82.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108238576 + NM_000051 ATM 0 . . . 5.94 80.34 13 5.09 No 14 0.61 No 0 0 No -19 0.34 No 44 91.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190668519 + NM_000534 PMS1 0 . . . 5.47 81.41 53 8.07 Yes 19 0.97 Yes 0 0 No -48 0.59 No 39 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68902689 + NM_133509 RAD51B 0 . . . 8.1 81.13 28 4.13 No 70 0.4 No 0 0 No -24 0.56 No 38 47.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59877056 - NM_032043 BRIP1 0 . . . 9.83 87.93 19 5.31 No 58 0.35 No 0 0 No -22 0.55 No 42 62.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68879501 + NM_133509 RAD51B 0 . . . 8.44 83.43 19 5.48 No 10 1.17 Yes 0 0 No -18 0.57 No 48 84.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68630196 + NM_133509 RAD51B 0 . . . 6.81 76.78 21 4.69 No 54 1.75 Yes 0 0 No -25 0.5 No 21 82.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131911006 + NM_005732 RAD50 0 . . . 5.2 72.26 17 4.8 No 71 -3.91 No 0 0 No -19 0.74 Yes 57 30.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48015729 + NM_000179 MSH6 0 . . . 3.97 84.41 21 4.69 No 43 1.11 Yes 0 0 No -21 0.74 Yes 28 83.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37060890 + NM_000249 MLH1 0 . . . 2.35 0 45 8.27 Yes 29 1.65 Yes 0 0 No -33 0.5 No 36 59.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47714616 + NM_000251 MSH2 0 . . . 7.65 82.2 29 6.24 Yes 59 -1.75 No 0 0 No -28 0.6 No 48 73.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33445893 - NM_002878 RAD51D 0 . . . 1.65 72.38 19 5 No 53 0.64 No 0 0 No -9 0.63 No 36 39.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33426986 - NM_002878 RAD51D 0 . . . 2.14 66.56 29 6.19 Yes 50 0.89 Yes 0 0 No -28 0.59 No 52 52.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190647401 + NM_000534 PMS1 0 . . . 1.79 65.28 19 4.58 No 13 1.57 Yes 0 0 No -18 0.95 Yes 45 69.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68859544 + NM_133509 RAD51B 0 . . . 8.99 87.57 13 4.86 No 6 1.62 Yes 0 0 No -24 0.53 No 52 68.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89647553 + NM_000314 PTEN 0 . . . 4.05 77.03 56 8 Yes 10 0.72 No 0 0 No -43 0.34 No 48 85.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68886414 + NM_133509 RAD51B 0 . . . 5.91 78.78 17 5.66 Yes 35 1.14 Yes 0 0 No -16 0.35 No 23 71.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90987539 - NM_002485 NBN 0 . . . 2.58 61.3 29 3.1 No 2 0.54 No 0 0 No -31 0.6 No 43 85.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152349449 - NM_005431 XRCC2 0 . . . 9.11 81.95 44 6.71 Yes NA NA NA 0 0 No -42 0.62 No 44 95.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56775593 + NM_058216 RAD51C 0 . . . 1.11 0 21 5.58 Yes 7 1.46 Yes 0 0 No -25 0.32 No 15 94.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47773317 + NM_000251 MSH2 0 . . . 2.14 71.66 40 8.48 Yes 67 -5.31 No 0 0 No -39 0.64 No 41 82.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68947231 + NM_133509 RAD51B 0 . . . 9.02 84.55 30 5 No 21 1 Yes 0 0 No -29 0.62 No 41 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59870266 - NM_032043 BRIP1 0 . . . 2.85 64.81 28 5.35 No 48 0.77 Yes 0 0 No -22 0.41 No 42 33.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69148565 + NM_133509 RAD51B 0 . . . 1.3 75.49 14 5.18 No 76 1.11 Yes 0 0 No -47 0.53 No 50 78.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69023892 + NM_133509 RAD51B 0 . . . 3.49 74.95 24 4.3 No 48 0.32 No 0 0 No -23 0.8 Yes 50 47.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69130646 + NM_133509 RAD51B 0 . . . 2.08 59.78 36 6.43 Yes 42 0.84 Yes 0 0 No -35 0.65 No 43 64.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108100233 + NM_000051 ATM 0 . . . 5.28 0 27 5.2 No 20 0.6 No 0 0 No -26 0.48 No 50 40.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89687609 + NM_000314 PTEN 0 . . . 11.58 92 30 5.77 Yes 25 0.63 No 0 0 No -29 0.5 No 48 79.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75479966 - NM_001040108 MLH3 0 . . . 5.16 75.59 17 6.58 Yes 34 0.97 Yes 0 0 No -17 0.6 No 37 47.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69092478 + NM_133509 RAD51B 0 . . . 4.99 71.11 13 4.16 No 73 1.19 Yes 0 0 No -21 0.5 No 39 70.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68685827 + NM_133509 RAD51B 0 . . . 2.67 69.48 35 5.65 Yes 62 -5.94 No 0 0 No -40 0.71 Yes 49 58.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23646408 - NM_024675 PALB2 0 . . . 2.29 69.65 42 6.9 Yes 12 0.23 No 0 0 No -22 0.78 Yes 46 76.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108197186 + NM_000051 ATM 0 . . . 3.2 76.88 30 6.33 Yes 36 -2.12 No 0 0 No -32 0.57 No 41 78.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131967686 + NM_005732 RAD50 0 . . . 4.11 81.97 45 8.37 Yes 70 1.75 Yes 0 0 No -44 0.92 Yes 19 65.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68440126 + NM_133509 RAD51B 0 . . . 4.48 83.73 22 6 Yes 5 0.85 Yes 0 0 No -29 0.6 No 48 52.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94220149 - NM_005591 MRE11 0 . . . 4.19 79.66 15 4.58 No 3 0.93 Yes 0 0 No -42 0.65 No 48 71.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23637192 - NM_024675 PALB2 0 . . . 2.24 68.31 17 6.93 Yes 4 1.8 Yes 0 0 No -29 0.37 No 42 86.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68864642 + NM_004360 CDH1 0 . . . 0.73 0 32 6.24 Yes 56 0.58 No 0 0 No -31 0.92 Yes 51 61.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108201367 + NM_000051 ATM 0 . . . 2.37 69.7 66 7.38 Yes 62 0.79 Yes 0 0 No -32 0.63 No 46 78.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47717067 + NM_000251 MSH2 0 . . . 4.26 77 14 4.47 No 1 0.47 No 0 0 No -38 0.48 No 45 51.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131926547 + NM_005732 RAD50 0 . . . 4.89 79.02 16 5.2 No 15 -0.98 No 0 0 No -25 0.84 Yes 52 79.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68298445 + NM_133509 RAD51B 0 . . . 4.02 80.12 20 4.68 No 14 1.25 Yes 0 0 No -20 0.24 No 44 93.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41214575 - NM_007294 BRCA1 0 . . . 10.43 81.5 29 5.9 Yes -1 0.75 No 0 0 No -28 0.75 Yes 44 45.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131897354 + NM_005732 RAD50 0 . . . 9.36 80.5 14 4.9 No 8 2.11 Yes 0 0 No -19 0.58 No 44 61.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47776374 + NM_000251 MSH2 0 . . . 2.89 81.29 42 7.81 Yes 62 -3.9 No 0 0 No -41 0.54 No 49 59.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29097664 - NM_001005735 CHEK2 0 . . . 5.4 76.93 18 4.61 No 15 1.16 Yes 0 0 No -20 0.39 No 42 57.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41195178 - NM_007294 BRCA1 0 . . . 1.39 68.7 31 7.3 Yes 11 1.48 Yes 0 0 No -36 0.34 No 41 94.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68615612 + NM_133509 RAD51B 0 . . . 3.02 0 28 5.38 No 4 0.46 No 0 0 No -27 0.65 No 46 46.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68853471 + NM_133509 RAD51B 0 . . . 2.4 0 28 5.29 No 22 1.14 Yes 0 0 No -27 0.57 No 36 69.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75480360 - NM_001040108 MLH3 0 . . . 1.64 65.72 46 7.45 Yes 63 0.4 No 0 0 No -35 0.47 No 59 31.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47666118 + NM_000251 MSH2 0 . . . 4.76 64.55 19 5.39 No 13 0.03 No 0 0 No -22 0.52 No 38 64.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68436559 + NM_133509 RAD51B 0 . . . 3.42 64.29 18 3.69 No 63 -5.82 No 0 0 No -45 0.32 No 42 75.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47632638 + NM_000251 MSH2 0 . . . 2.2 80.04 41 6.02 Yes 66 -5.02 No 0 0 No -24 0.52 No 50 68.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75486884 - NM_001040108 MLH3 0 . . . 5.34 86.94 25 5.2 No 55 0.66 No 0 0 No -27 0.71 Yes 42 74.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68304952 + NM_133509 RAD51B 0 . . . 2.41 59.38 36 6.02 Yes 15 0.76 No 0 0 No -24 0.48 No 37 75.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41267172 - NM_007294 BRCA1 0 . . . 6.83 83.12 24 3.63 No 54 1.27 Yes 0 0 No -23 0.95 Yes 39 73.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68771103 + NM_133509 RAD51B 0 . . . 0.04 56.52 20 4.87 No 59 0.49 No 0 0 No -31 0.28 No 46 45.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94221531 - NM_005591 MRE11 0 . . . 1 62.6 18 5.74 Yes 16 0.45 No 0 0 No -24 0.46 No 42 89.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41272096 - NM_007294 BRCA1 0 . . . 2.52 63.94 29 5.74 Yes 65 0.93 Yes 0 0 No -26 0.59 No 48 37.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69135591 + NM_133509 RAD51B 0 . . . 2.35 64.44 29 5.29 No 26 0.37 No 0 0 No -51 0.44 No 41 80.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84395863 - NM_139076 FAM175A 0 . . . 2.3 84.41 23 5.2 No 22 1.15 Yes 0 0 No -22 0.63 No 48 88.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48032669 + NM_000179 MSH6 0 . . . 3.2 61.99 18 4.59 No 11 0.47 No 0 0 No -23 0.52 No 36 48.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68400796 + NM_133509 RAD51B 0 . . . 2.78 65.62 32 6.08 Yes 1 0.51 No 0 0 No -31 0.8 Yes 47 85.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215602806 - NM_000465 BARD1 0 . . . 1.54 64.1 27 6.41 Yes 1 0.12 No 0 0 No -26 0.82 Yes 42 43.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89715611 + NM_000314 PTEN 0 . . . 1.27 70.09 20 5.43 No 15 -1.96 No 0 0 No -23 0.46 No 49 73.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21984431 - NM_000077 CDKN2A 0 . . . 4.65 78.2 25 5.37 No 52 -4.22 No 0 0 No -24 0.88 Yes 42 41.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68826342 + NM_133509 RAD51B 0 . . . 4.87 85.68 13 5.18 No 72 -4.02 No 0 0 No -25 0.52 No 50 65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68462073 + NM_133509 RAD51B 0 . . . 0.11 74.8 21 3.17 No 3 0.21 No 0 0 No -20 0.79 Yes 55 45.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190678825 + NM_000534 PMS1 0 . . . 4.8 80.89 63 8.06 Yes 23 1.22 Yes 0 0 No -26 0.47 No 42 61.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68675511 + NM_133509 RAD51B 0 . . . 3.98 84.08 21 4.98 No 47 1.26 Yes 0 0 No -20 0.46 No 47 57.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68478085 + NM_133509 RAD51B 0 . . . 5.99 80.54 22 4.69 No 7 1.59 Yes 0 0 No -21 0.97 Yes 43 89.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32913993 + NM_000059 BRCA2 0 . . . 2.74 70.88 24 6.08 Yes 47 1.03 Yes 0 0 No -23 0.85 Yes 43 69.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29138561 - NM_001005735 CHEK2 0 . . . 6.98 84.65 9 3.87 No 37 1.26 Yes 0 0 No -25 0.81 Yes 39 72.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68369301 + NM_133509 RAD51B 0 . . . 5.01 78.05 10 4 No 20 1.11 Yes 0 0 No -26 0.88 Yes 38 66.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48009368 + NM_000179 MSH6 0 . . . 1.95 79.61 20 6.48 Yes 4 1.05 Yes 0 0 No -28 0.5 No 43 50.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131918941 + NM_005732 RAD50 0 . . . 2.11 67.36 26 6 Yes 51 0.58 No 0 0 No -25 0.67 Yes 32 71.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69066397 + NM_133509 RAD51B 0 . . . 0.1 0 60 4.62 No 59 0.91 Yes 0 0 No -24 0.46 No 31 91.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29137922 - NM_001005735 CHEK2 0 . . . 2.43 78.85 12 5.57 Yes 22 1 Yes 0 0 No -29 0.57 No 36 63.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59902569 - NM_032043 BRIP1 0 . . . 3.66 85.81 20 4.87 No 9 0.25 No 0 0 No -19 0.67 Yes 49 68.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69026814 + NM_133509 RAD51B 0 . . . 3.37 64.66 36 6.98 Yes -4 0.13 No 0 0 No -35 0.43 No 11 46.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68391061 + NM_133509 RAD51B 0 . . . 6.1 73.83 20 5.1 No 29 -1.61 No 0 0 No -19 0.64 No 43 76.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68997729 + NM_133509 RAD51B 0 . . . 1.95 71.99 41 7.27 Yes 36 0.75 No 0 0 No -27 0.54 No 54 39.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68468538 + NM_133509 RAD51B 0 . . . 5.9 73.39 27 5.53 No 50 0.96 Yes 0 0 No -30 0.53 No 38 63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75498212 - NM_001040108 MLH3 0 . . . 6.44 76.16 15 5 No 76 0.57 No 0 0 No -46 0.5 No 44 66.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108220418 + NM_000051 ATM 0 . . . 0.59 72.02 18 5.39 No 62 -3.9 No 0 0 No -17 0.5 No 39 62.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90950973 - NM_002485 NBN 0 . . . 3.89 68.62 27 5.2 No 68 1.12 Yes 0 0 No -26 0.46 No 48 46.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69086150 + NM_133509 RAD51B 0 . . . 1.61 77.77 27 5.48 No 66 -4.9 No 0 0 No -27 0.8 Yes 48 66.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84382538 - NM_139076 FAM175A 0 . . . 6.44 77.39 27 7.62 Yes 15 0.27 No 0 0 No -26 0.93 Yes 43 71.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215666503 - NM_000465 BARD1 0 . . . 0.92 73.9 23 4.85 No -3 0.43 No 0 0 No -22 0.74 Yes 44 67.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47709519 + NM_000251 MSH2 0 . . . 1.5 73.38 31 8.24 Yes 42 -4.38 No 0 0 No -27 0.72 Yes 48 73.64 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32910426 + NM_000059 BRCA2 0 . . . 1.54 73.47 22 4.79 No 53 1.2 Yes 0 0 No -21 0.47 No 43 59.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47736692 + NM_000251 MSH2 0 . . . 3.58 82.46 23 5.39 No 64 -2.4 No 0 0 No -25 0.42 No 53 54.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59914563 - NM_032043 BRIP1 0 . . . 5.85 77.19 19 5.38 No 17 1.19 Yes 0 0 No -27 0.75 Yes 41 88.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89656292 + NM_000314 PTEN 0 . . . 2.68 87.85 22 5.1 No 47 1.01 Yes 0 0 No -22 0.55 No 52 67.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68377358 + NM_133509 RAD51B 0 . . . 4.89 80.56 13 5.48 No 38 1.03 Yes 0 0 No -33 0.57 No 44 34.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68628242 + NM_133509 RAD51B 0 . . . 4.63 70.16 19 4.88 No 19 0.85 Yes 0 0 No -22 0.69 Yes 39 77.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94193748 - NM_005591 MRE11 0 . . . 7.02 74.54 26 6.26 Yes 8 1.15 Yes 0 0 No -25 0.74 Yes 41 65.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37065782 + NM_000249 MLH1 0 . . . 4.81 86.22 17 5.12 No 40 0.48 No 0 0 No -24 0.72 Yes 18 73.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190744194 + NM_000534 PMS1 0 . . . 1.15 71.09 18 4.8 No 53 -0.81 No 0 0 No -23 0.66 Yes 56 14.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69097328 + NM_133509 RAD51B 0 . . . 2.33 75.41 16 4.46 No 9 0.58 No 0 0 No -25 0.66 Yes 49 77.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68752742 + NM_133509 RAD51B 0 . . . 2.14 0 25 5.24 No 5 0.86 Yes 0 0 No -21 0.6 No 44 72.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59804332 - NM_032043 BRIP1 0 . . . 1.2 73.66 15 5.71 Yes 48 1.58 Yes 0 0 No -50 0.67 Yes 30 83.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37090983 + NM_000249 MLH1 0 . . . 6.11 83.1 21 5.73 Yes 12 1.85 Yes 0 0 No -23 0.7 Yes 46 86.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68898691 + NM_133509 RAD51B 0 . . . 4.68 70.12 31 5.59 Yes 1 0.38 No 0 0 No -28 0.72 Yes 38 78.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69086656 + NM_133509 RAD51B 0 . . . 4.26 78.33 11 5.39 No 32 1.1 Yes 0 0 No -33 0.64 No 43 64.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41278333 - NM_007294 BRCA1 0 . . . 0.51 73.46 13 4.96 No 22 1.23 Yes 0 0 No -24 0.64 No 35 71.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68764006 + NM_133509 RAD51B 0 . . . 8.2 85.82 62 7.53 Yes 35 0.19 No 0 0 No -25 0.42 No 16 53.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41007626 + NM_001164269 RAD51 0 . . . 6.31 88.28 48 6.85 Yes 8 0.51 No 0 0 No -30 0.37 No 50 89.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89679426 + NM_000314 PTEN 0 . . . 4.39 76.54 23 4.89 No 25 1.54 Yes 0 0 No -23 0.79 Yes 49 71.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215612708 - NM_000465 BARD1 0 . . . 1.47 71.98 39 6.48 Yes 34 1.01 Yes 0 0 No -38 0.86 Yes 39 49.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68884006 + NM_133509 RAD51B 0 . . . 6.69 64.61 19 4.18 No 41 1.49 Yes 0 0 No -39 0.65 No 44 56.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215626527 - NM_000465 BARD1 0 . . . 1.92 68.38 30 5.19 No -4 1.4 Yes 0 0 No -32 0.67 Yes 16 62.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68778191 + NM_004360 CDH1 0 . . . 7 81.8 13 5.39 No 7 0.36 No 0 0 No -32 0.33 No 51 90.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108130856 + NM_000051 ATM 0 . . . 5.53 75.79 27 6.4 Yes 9 1.12 Yes 0 0 No -26 0.83 Yes 49 92.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69075830 + NM_133509 RAD51B 0 . . . 10.54 78.64 22 5.29 No 44 1.88 Yes 0 0 No -22 0.8 Yes 36 80.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68876486 + NM_133509 RAD51B 0 . . . 0.89 85.9 21 4.66 No 24 0.22 No 0 0 No -19 0.8 Yes 48 74.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89728355 + NM_000314 PTEN 0 . . . 4.94 83.11 20 4.52 No 22 1.42 Yes 0 0 No -35 0.81 Yes 49 88.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40995727 + NM_001164269 RAD51 0 . . . 7.63 67.92 23 5.08 No 59 0.83 Yes 0 0 No -22 0.87 Yes 41 84.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68633776 + NM_133509 RAD51B 0 . . . 5.7 78.74 17 4.69 No 60 0.25 No 0 0 No -41 0.37 No 40 79.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90953904 - NM_002485 NBN 0 . . . 3.99 73.98 18 4.8 No 15 0.12 No 0 0 No -39 0.53 No 43 48.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59938066 - NM_032043 BRIP1 0 . . . 9.35 86.98 20 4.8 No 2 0.1 No 0 0 No -33 0.62 No 47 85.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23620039 - NM_024675 PALB2 0 . . . 7.95 88.03 26 5 No 4 1.02 Yes 0 0 No -21 0.61 No 53 52.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68384150 + NM_133509 RAD51B 0 . . . 4.38 80.57 28 4.39 No 54 -4.18 No 0 0 No -50 0.6 No 43 62.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108133793 + NM_000051 ATM 0 . . . 2.63 64.16 24 5.69 Yes 9 1.04 Yes 0 0 No -23 0.64 No 49 50.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68897204 + NM_133509 RAD51B 0 . . . 1.08 0 28 5.48 No 50 0.75 No 0 0 No -27 0.84 Yes 44 72.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68923292 + NM_133509 RAD51B 0 . . . 2.11 68.79 23 5.29 No 4 1.55 Yes 0 0 No -22 0.76 Yes 37 71.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131962754 + NM_005732 RAD50 0 . . . 3.6 85.02 23 8.35 Yes 60 1.39 Yes 0 0 No -23 0.6 No 43 50.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131980342 + NM_005732 RAD50 0 . . . 5.78 88.43 43 6.4 Yes 18 0.61 No 0 0 No -46 0.44 No 51 64.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37041101 + NM_000249 MLH1 0 . . . 2.86 74.81 20 5.1 No 66 1.68 Yes 0 0 No -22 0.46 No 35 97.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47806173 + NM_000251 MSH2 0 . . . 2.55 68.43 22 4.69 No 28 -3.51 No 0 0 No -21 0.81 Yes 41 71.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41275498 - NM_007294 BRCA1 0 . . . 1.44 74.68 38 5.65 Yes 53 0.67 No 0 0 No -43 0.36 No 52 77.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68357805 + NM_133509 RAD51B 0 . . . 4.15 70.22 16 4.67 No 13 -1.99 No 0 0 No -45 0.65 No 22 68.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68444396 + NM_133509 RAD51B 0 . . . 2.79 67.29 22 5.74 Yes 6 0.49 No 0 0 No -21 0.68 Yes 52 55.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68790791 + NM_004360 CDH1 0 . . . 2.41 74.78 20 5.48 No 22 -1.36 No 0 0 No -24 0.78 Yes 40 51.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56794152 + NM_058216 RAD51C 0 . . . 7.82 85.05 72 5.61 Yes 14 1.66 Yes 0 0 No -21 0.47 No 44 82.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47800447 + NM_000251 MSH2 0 . . . 3.85 80.64 48 6.11 Yes -4 1.02 Yes 0 0 No -23 0.62 No 46 34.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47708282 + NM_000251 MSH2 0 . . . 0.24 61.42 32 5.32 No 24 0.47 No 0 0 No -31 0.53 No 45 39.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59852186 - NM_032043 BRIP1 0 . . . 0.47 59.07 31 5.43 No 67 1.09 Yes 0 0 No -30 0.53 No 44 74.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131912188 + NM_005732 RAD50 0 . . . 3.72 77.76 28 2.98 No 28 0.15 No 0 0 No -24 0.65 No 48 78.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32900909 + NM_000059 BRCA2 0 . . . 2.38 0 24 4.44 No 15 0.98 Yes 0 0 No -23 0.75 Yes 43 80.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47631948 + NM_000251 MSH2 0 . . . 1.76 68.95 17 5.28 No 16 1.1 Yes 0 0 No -23 0.34 No 42 86.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152372943 - NM_005431 XRCC2 0 . . . 7.08 76.42 17 4.8 No 1 0.64 No 0 0 No -20 0.7 Yes 38 41.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131960964 + NM_005732 RAD50 0 . . . 3.25 80.12 19 4.24 No 8 1.2 Yes 0 0 No -18 0.89 Yes 50 88.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29090614 - NM_001005735 CHEK2 0 . . . 2.37 62.31 16 6 Yes 71 0.51 No 0 0 No -61 0.23 No 48 44.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68991978 + NM_133509 RAD51B 0 . . . 4.39 73.75 21 4.79 No 75 -4.95 No 0 0 No -21 0.83 Yes 48 42.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131891851 + NM_005732 RAD50 0 . . . 0.16 81.73 13 3.61 No 48 0.54 No 0 0 No -25 0.49 No 15 52.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89731196 + NM_000314 PTEN 0 . . . 9.24 76.03 17 4.8 No 17 0.19 No 0 0 No -37 0.45 No 41 93.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41209662 - NM_007294 BRCA1 0 . . . 2.2 72.26 23 6.4 Yes 31 1.19 Yes 0 0 No -22 0.9 Yes 27 58.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68443143 + NM_133509 RAD51B 0 . . . 4.46 67.48 36 7.48 Yes 50 1.15 Yes 0 0 No -35 0.75 Yes 44 83.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68978763 + NM_133509 RAD51B 0 . . . 8.07 67.4 35 6.4 Yes 70 -1.6 No 0 0 No -34 0.75 Yes 37 39.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105186091 + NM_021930 RINT1 0 . . . 0.78 84.22 29 5.56 Yes 33 1.01 Yes 0 0 No -28 0.9 Yes 25 55.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40995789 + NM_001164269 RAD51 0 . . . 3.92 77.69 32 6.03 Yes 11 0.47 No 0 0 No -39 0.57 No 47 74.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94169009 - NM_005591 MRE11 0 . . . 4.42 71.22 11 5 No 38 -1.4 No 0 0 No -22 0.25 No 41 70.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6012178 - NM_000535 PMS2 0 . . . 5.87 90.91 24 5 No 61 0.05 No 0 0 No -23 0.72 Yes 52 50.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68418695 + NM_133509 RAD51B 0 . . . 2.31 62.43 21 4.42 No 58 -5.26 No 0 0 No -18 0.55 No 45 64.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69104049 + NM_133509 RAD51B 0 . . . 2.66 75.95 19 6.24 Yes 76 1.17 Yes 0 0 No -19 0.32 No 50 84.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69039816 + NM_133509 RAD51B 0 . . . 7.13 89 18 4.69 No 39 0.92 Yes 0 0 No -37 0.7 Yes 47 94.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75511673 - NM_001040108 MLH3 0 . . . 3.12 67.93 21 5.07 No 54 -3.91 No 0 0 No -20 0.65 No 39 42.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90953213 - NM_002485 NBN 0 . . . 1.48 75.89 17 3.99 No 3 0.87 Yes 0 0 No -17 0.56 No 37 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59828044 - NM_032043 BRIP1 0 . . . 0.38 67.88 29 6.44 Yes 53 0.75 No 0 0 No -28 0.35 No 16 81.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108223451 + NM_000051 ATM 0 . . . 1.46 64.72 26 5.03 No 1 0.03 No 0 0 No -25 0.88 Yes 29 65.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32972779 + NM_000059 BRCA2 0 . . . 0.45 0 14 5.2 No 31 -2.33 No 0 0 No -59 0.84 Yes 45 22.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48016534 + NM_000179 MSH6 0 . . . 2.49 70.39 15 5.32 No 41 1.26 Yes 0 0 No -25 0.57 No 41 42.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131955617 + NM_005732 RAD50 0 . . . 2.84 84.41 32 6.54 Yes 61 -3.53 No 0 0 No -31 0.79 Yes 52 80.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89661759 + NM_000314 PTEN 0 . . . 5.27 0 17 6.87 Yes 27 1.2 Yes 0 0 No -24 0.43 No 31 81.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47646305 + NM_000251 MSH2 0 . . . 3.17 66.46 25 5.57 Yes 16 1.42 Yes 0 0 No -24 0.73 Yes 42 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40991225 + NM_001164269 RAD51 0 . . . 5.17 79.61 12 5.12 No 69 -5.95 No 0 0 No -25 0.64 No 49 79.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37062494 + NM_000249 MLH1 0 . . . 2.15 0 26 5.39 No 60 0.5 No 0 0 No -24 0.3 No 49 74.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89727828 + NM_000314 PTEN 0 . . . 1.43 82.14 38 6.93 Yes 27 0.35 No 0 0 No -23 0.69 Yes 51 79.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94162455 - NM_005591 MRE11 0 . . . 1.75 0 33 5.55 No 55 0.64 No 0 0 No -28 0.46 No 51 38.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131925579 + NM_005732 RAD50 0 . . . 1.65 74.29 14 5.45 No -2 0.37 No 0 0 No -47 0.42 No 44 70.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29117050 - NM_001005735 CHEK2 0 . . . 3.18 71.16 51 5.91 Yes 2 0.19 No 0 0 No -22 0.51 No 47 93.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56792564 + NM_058216 RAD51C 0 . . . 3.63 80.25 17 4.99 No 4 0.31 No 0 0 No -23 0.26 No 46 47.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89652757 + NM_000314 PTEN 0 . . . 4.04 70.73 25 5.39 No 48 -4.4 No 0 0 No -22 0.79 Yes 43 57.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29116433 - NM_001005735 CHEK2 0 . . . 1.26 73.7 25 4.8 No 74 -6.43 No 0 0 No -24 0.89 Yes 53 42.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47677315 + NM_000251 MSH2 0 . . . 0.25 64.36 46 4.88 No 29 1.01 Yes 0 0 No -20 0.54 No 49 42.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108125208 + NM_000051 ATM 0 . . . 1.81 0 29 5.07 No 71 -2.91 No 0 0 No -21 0.91 Yes 46 46.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108185756 + NM_000051 ATM 0 . . . 3.26 67.96 32 5.57 Yes 32 1.13 Yes 0 0 No -21 0.32 No 45 62.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32954469 + NM_000059 BRCA2 0 . . . 3.89 82.22 24 5.48 No 32 1.15 Yes 0 0 No -27 0.59 No 42 60.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47650945 + NM_000251 MSH2 0 . . . 1.21 74.6 21 5.83 Yes 43 1.03 Yes 0 0 No -20 0.51 No 46 64.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32947799 + NM_000059 BRCA2 0 . . . 1.65 66.79 13 5.29 No 50 1.27 Yes 0 0 No -25 0.61 No 37 39.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68821632 + NM_004360 CDH1 0 . . . 0.09 71.74 72 8.53 Yes 70 1.15 Yes 0 0 No -17 0.74 Yes 49 54.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131901429 + NM_005732 RAD50 0 . . . 7.31 80.89 16 3.47 No 16 1.59 Yes 0 0 No -21 0.37 No 42 53.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108222405 + NM_000051 ATM 0 . . . 0.14 71.2 12 4.8 No 63 1.16 Yes 0 0 No -20 0.51 No 51 60.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131975520 + NM_005732 RAD50 0 . . . 7.55 89.02 31 5.9 Yes 56 -2.93 No 0 0 No -23 0.78 Yes 47 64.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48028587 + NM_000179 MSH6 0 . . . 2.11 75.49 40 6.78 Yes 49 -0.18 No 0 0 No -24 0.6 No 49 82.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32916777 + NM_000059 BRCA2 0 . . . 2.11 85.51 24 4.51 No 66 -4.46 No 0 0 No -23 0.71 Yes 47 67.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215645284 - NM_000465 BARD1 0 . . . 7.41 83.05 32 6.08 Yes 67 0.4 No 0 0 No -31 0.86 Yes 53 42.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105199536 + NM_021930 RINT1 0 . . . 3.68 66.16 12 5.29 No 60 0.54 No 0 0 No -23 0.61 No 45 68.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68909462 + NM_133509 RAD51B 0 . . . 3.23 70.18 23 3.58 No 56 0.94 Yes 0 0 No -22 0.72 Yes 46 34.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59808601 - NM_032043 BRIP1 0 . . . 0.61 0 20 4.73 No 19 1.08 Yes 0 0 No -20 0.92 Yes 45 67.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89717120 + NM_000314 PTEN 0 . . . 4.88 68.2 30 6.63 Yes 20 0.52 No 0 0 No -29 0.9 Yes 38 91.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131892759 + NM_005732 RAD50 0 . . . 4.72 69.41 19 5.56 Yes 74 -3.51 No 0 0 No -45 0.59 No 36 50.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190655426 + NM_000534 PMS1 0 . . . 1.95 72.89 20 5.1 No 69 0.24 No 0 0 No -23 0.8 Yes 50 77.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190706125 + NM_000534 PMS1 0 . . . 3.75 68.87 19 4.57 No 17 0.51 No 0 0 No -18 0.91 Yes 41 74.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68490460 + NM_133509 RAD51B 0 . . . 0.49 67.55 25 4.9 No 67 1.05 Yes 0 0 No -24 0.5 No 52 64.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68578488 + NM_133509 RAD51B 0 . . . 1.27 62.61 43 7.27 Yes 1 -0.21 No 0 0 No -24 0.57 No 43 44.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68390500 + NM_133509 RAD51B 0 . . . 1.35 0 13 5 No 55 1.25 Yes 0 0 No -22 0.79 Yes 46 41.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68483933 + NM_133509 RAD51B 0 . . . 2.95 83.28 23 6.88 Yes 62 0.76 No 0 0 No -22 0.7 Yes 37 42.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68647791 + NM_133509 RAD51B 0 . . . 0.29 71.4 37 6.1 Yes 39 1.22 Yes 0 0 No -27 0.58 No 42 74.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131980014 + NM_005732 RAD50 0 . . . 7.59 78.32 28 5.83 Yes 2 0.98 Yes 0 0 No -27 0.65 No 56 62.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47709211 + NM_000251 MSH2 0 . . . 2.95 74.9 18 5.02 No 25 0.15 No 0 0 No -17 0.49 No 41 53.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68453579 + NM_133509 RAD51B 0 . . . 2.19 64.27 30 6 Yes 6 1.08 Yes 0 0 No -29 0.9 Yes 49 78.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21970023 - NM_000077 CDKN2A 0 . . . 1.83 65.3 15 5.57 Yes 73 0.5 No 0 0 No -33 0.44 No 55 72.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48005540 + NM_000179 MSH6 0 . . . 0.83 0 44 4.77 No 63 0.97 Yes 0 0 No -30 0.41 No 44 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190739802 + NM_000534 PMS1 0 . . . 5.99 82.51 57 6.74 Yes 73 -5.35 No 0 0 No -44 0.68 Yes 44 63.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32921667 + NM_000059 BRCA2 0 . . . 7.55 92.49 30 6 Yes 4 0.26 No 0 0 No -32 0.42 No 42 73.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47667821 + NM_000251 MSH2 0 . . . 9.56 93.36 21 6.4 Yes 15 1.62 Yes 0 0 No -20 0.75 Yes 43 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68704474 + NM_133509 RAD51B 0 . . . 3.97 84.41 17 5.39 No 20 0.66 No 0 0 No -23 0.37 No 38 94.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108233882 + NM_000051 ATM 0 . . . 6.92 88.95 19 5.06 No 55 0.75 No 0 0 No -29 0.35 No 42 52.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108184029 + NM_000051 ATM 0 . . . 2.46 76.05 25 6.32 Yes 34 0.52 No 0 0 No -24 0.87 Yes 33 43.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23622260 - NM_024675 PALB2 0 . . . 1.86 80.45 16 7.26 Yes 32 1.06 Yes 0 0 No -20 0.67 Yes 51 27.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23616060 - NM_024675 PALB2 0 . . . 5.33 87.32 33 5.51 No 2 1.28 Yes 0 0 No -32 0.51 No 23 64.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108177897 + NM_000051 ATM 0 . . . 0.99 83.92 14 5.34 No 58 1.46 Yes 0 0 No -29 0.32 No 27 90.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84394051 - NM_139076 FAM175A 0 . . . 0.9 80.45 15 5.8 Yes 51 -3.78 No 0 0 No -27 0.66 No 46 33.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68788159 + NM_133509 RAD51B 0 . . . 1.32 81.42 32 4.9 No 75 -2.64 No 0 0 No -31 0.67 Yes 23 84.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6035141 - NM_000535 PMS2 0 . . . 6.77 84.5 26 5.57 Yes 23 0.38 No 0 0 No -25 0.62 No 52 68.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69083874 + NM_133509 RAD51B 0 . . . 3.68 75.81 92 9.57 Yes 73 0.92 Yes 0 0 No -34 0.13 No 50 88.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108157151 + NM_000051 ATM 0 . . . 4.65 83.13 15 4.8 No 64 -4.88 No 0 0 No -28 0.56 No 44 87.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131952320 + NM_005732 RAD50 0 . . . 4.66 76.73 14 4.47 No 26 1.13 Yes 0 0 No -44 0.54 No 32 91.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94211104 - NM_005591 MRE11 0 . . . 6.55 87.16 12 4.79 No -4 1.39 Yes 0 0 No -58 0.59 No 42 60.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59937595 - NM_032043 BRIP1 0 . . . 4.06 73.59 15 5.57 Yes 8 0.86 Yes 0 0 No -47 0.38 No 50 60.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215648502 - NM_000465 BARD1 0 . . . 4.85 76.81 25 5.11 No 74 0.28 No 0 0 No -24 0.64 No 39 79.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131967702 + NM_005732 RAD50 0 . . . 4.52 79.45 23 5.29 No 48 1.67 Yes 0 0 No -22 0.78 Yes 52 29.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47749776 + NM_000251 MSH2 0 . . . 3.28 70.93 20 5.57 Yes 46 0.82 Yes 0 0 No -19 0.61 No 48 74.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90997807 - NM_002485 NBN 0 . . . 4.14 76.09 18 4.47 No 2 -0.95 No 0 0 No -28 0.58 No 44 69.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68540924 + NM_133509 RAD51B 0 . . . 6.83 85.4 21 5.66 Yes 22 0.73 No 0 0 No -20 0.68 Yes 49 53.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108173918 + NM_000051 ATM 0 . . . 5.29 76.22 32 4.77 No 57 0.33 No 0 0 No -34 0.91 Yes 49 92.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68624920 + NM_133509 RAD51B 0 . . . 0.73 63.89 29 5.48 No 28 -1.77 No 0 0 No -28 0.92 Yes 61 24.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68987161 + NM_133509 RAD51B 0 . . . 2.27 69.58 11 4.69 No 56 -3.77 No 0 0 No -23 0.13 No 48 54.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47635349 + NM_000251 MSH2 0 . . . 1.97 63.27 30 5.65 Yes 52 0.19 No 0 0 No -29 0.93 Yes 34 83.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131955088 + NM_005732 RAD50 0 . . . 3.49 70.01 22 5.29 No 66 1.31 Yes 0 0 No -21 0.58 No 44 34.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84390857 - NM_139076 FAM175A 0 . . . 3.09 70.67 21 4.61 No 7 0.54 No 0 0 No -20 0.38 No 45 64.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68676701 + NM_133509 RAD51B 0 . . . 3.01 0 28 5.85 Yes 35 0.42 No 0 0 No -27 0.8 Yes 38 83.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68585808 + NM_133509 RAD51B 0 . . . 5.43 85.28 30 5.83 Yes 18 1.3 Yes 0 0 No -29 0.87 Yes 40 46.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131966214 + NM_005732 RAD50 0 . . . 0.39 64.23 118 10.55 Yes 27 1.13 Yes 0 0 No -31 0.08 No 42 60.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68992729 + NM_133509 RAD51B 0 . . . 3.47 0 16 6.27 Yes 55 -4.2 No 0 0 No -34 0.3 No 56 27.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68965851 + NM_133509 RAD51B 0 . . . 0.72 73.56 39 6.83 Yes 12 0.93 Yes 0 0 No -23 0.48 No 38 68.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215655094 - NM_000465 BARD1 0 . . . 1.54 77.95 18 5.13 No 73 1.1 Yes 0 0 No -29 0.55 No 40 30.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47693532 + NM_000251 MSH2 0 . . . 5.19 81.32 28 5.83 Yes 51 0.89 Yes 0 0 No -27 0.64 No 31 40.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1205765 + NM_000455 STK11 0 . . . 3.37 70 25 5.48 No 64 -0.72 No 0 0 No -14 0.54 No 62 23.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108189542 + NM_000051 ATM 0 . . . 2.34 70.28 39 6.13 Yes 14 0.42 No 0 0 No -38 0.52 No 44 94.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59835708 - NM_032043 BRIP1 0 . . . 2.15 74.6 26 5.49 No 0 0.92 Yes 0 0 No -25 0.87 Yes 48 32.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68819603 + NM_133509 RAD51B 0 . . . 9.77 90.07 21 4.58 No 60 0.96 Yes 0 0 No -20 0.91 Yes 43 42.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32890645 + NM_000059 BRCA2 0 . . . 4.18 70.68 62 7.96 Yes 71 -3.97 No 0 0 No -36 0.64 No 49 67.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68718442 + NM_133509 RAD51B 0 . . . 7.67 85.82 21 5.81 Yes 7 1.37 Yes 0 0 No -34 0.71 Yes 39 87.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68468584 + NM_133509 RAD51B 0 . . . 6.69 74.25 23 5.2 No 21 0.63 No 0 0 No -22 0.75 Yes 46 43.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6027228 - NM_000535 PMS2 0 . . . 0.79 62.1 72 8.33 Yes 40 2.59 Yes 0 0 No -20 0.64 No 53 44.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6028624 - NM_000535 PMS2 0 . . . 0.36 61.05 14 4.47 No 56 1.09 Yes 0 0 No -31 0.55 No 42 45.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41266008 - NM_007294 BRCA1 0 . . . 1.76 68.95 49 6.75 Yes 16 1.1 Yes 0 0 No -23 0.4 No 42 90.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68967428 + NM_133509 RAD51B 0 . . . 3.41 0 31 5.92 Yes 70 0.57 No 0 0 No -25 0.46 No 43 45.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68861288 + NM_133509 RAD51B 0 . . . 5.91 89.71 24 6.54 Yes 60 0.71 No 0 0 No -22 0.6 No 50 78.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89662682 + NM_000314 PTEN 0 . . . 3.34 71.47 16 5.18 No 58 0.09 No 0 0 No -24 0.56 No 56 33.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68574412 + NM_133509 RAD51B 0 . . . 2.6 74.73 20 5.1 No 24 0.69 No 0 0 No -19 0.56 No 43 64.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68741016 + NM_133509 RAD51B 0 . . . 1.21 0 18 5.23 No 76 0.88 Yes 0 0 No -21 0.8 Yes 26 47.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190691574 + NM_000534 PMS1 0 . . . 2.32 66.16 26 5.56 Yes 46 0.37 No 0 0 No -25 0.77 Yes 49 30.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108217283 + NM_000051 ATM 0 . . . 5.43 80.05 27 5.61 Yes 57 1.67 Yes 0 0 No -26 0.82 Yes 47 53.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68816345 + NM_004360 CDH1 0 . . . 4.94 72.49 13 5.26 No 30 -0.48 No 0 0 No -31 0.35 No 28 50.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7567512 - NM_000546 TP53 0 . . . 2.75 63.8 19 4.8 No 56 0.79 Yes 0 0 No -18 0.94 Yes 42 25.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47794679 + NM_000251 MSH2 0 . . . 0.63 69.2 10 3.43 No 75 1.31 Yes 0 0 No -45 0.6 No 48 32.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68469530 + NM_133509 RAD51B 0 . . . 6.85 90.63 15 5.57 Yes 25 0.15 No 0 0 No -19 0.47 No 33 66.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59761196 - NM_032043 BRIP1 0 . . . 2.81 73.11 27 6.54 Yes 69 0.46 No 0 0 No -26 0.56 No 33 69.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6016635 - NM_000535 PMS2 0 . . . 9.91 88.6 30 4.91 No 14 -1.11 No 0 0 No -29 0.4 No 46 50.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37087040 + NM_000249 MLH1 0 . . . 4.06 76.16 14 4.9 No 43 1.18 Yes 0 0 No -24 0.32 No 40 64.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215653739 - NM_000465 BARD1 0 . . . 2.62 67.37 54 7.48 Yes 46 1.29 Yes 0 0 No -22 0.72 Yes 47 75.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41217657 - NM_007294 BRCA1 0 . . . 6.46 90.92 24 5.1 No 44 0.97 Yes 0 0 No -24 0.62 No 41 58.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108178111 + NM_000051 ATM 0 . . . 0.78 66.34 17 3.42 No 57 1.34 Yes 0 0 No -22 0.83 Yes 55 51.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59874974 - NM_032043 BRIP1 0 . . . 6.87 87.53 32 5.17 No 46 0.7 No 0 0 No -22 0.42 No 35 78.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45801219 - NM_001048171 MUTYH 0 . . . 0.49 0 13 6.93 Yes 64 -4.72 No 0 0 No -39 0.41 No 51 74.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94209379 - NM_005591 MRE11 0 . . . 4.83 77.54 26 5.2 No 4 1.19 Yes 0 0 No -52 0.42 No 32 56.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68906129 + NM_133509 RAD51B 0 . . . 9.27 92.04 35 5.87 Yes 15 1.65 Yes 0 0 No -34 0.84 Yes 47 76.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68969596 + NM_133509 RAD51B 0 . . . 3.38 0 24 4.87 No 40 -2.46 No 0 0 No -23 0.68 Yes 50 77.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215589265 - NM_000465 BARD1 0 . . . 6.18 72.32 11 5.27 No 15 1.05 Yes 0 0 No -25 0.55 No 43 94.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45807008 - NM_001048171 MUTYH 0 . . . 4.52 76.98 36 6.04 Yes 52 1.64 Yes 0 0 No -35 0.55 No 54 54.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56778226 + NM_058216 RAD51C 0 . . . 8.08 91.69 14 6.08 Yes 48 1.17 Yes 0 0 No -30 0.66 Yes 40 36.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131949838 + NM_005732 RAD50 0 . . . 4.43 74.92 37 6.42 Yes -3 0.32 No 0 0 No -36 0.78 Yes 61 33.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47770738 + NM_000251 MSH2 0 . . . 1.64 70.57 9 5.39 No 72 2.12 Yes 0 0 No -22 0.78 Yes 41 79.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6015967 - NM_000535 PMS2 0 . . . 3.41 71.75 23 5.02 No 66 1.34 Yes 0 0 No -22 0.83 Yes 48 60.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131981761 + NM_005732 RAD50 0 . . . 1.61 66.22 16 5.06 No 72 -4.88 No 0 0 No -20 0.71 Yes 33 56.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45801988 - NM_001048171 MUTYH 0 . . . 9.16 86.24 15 5.52 No 29 0.52 No 0 0 No -28 0.29 No 40 46.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90957870 - NM_002485 NBN 0 . . . 3.96 82.93 13 4.53 No 4 1.32 Yes 0 0 No -50 0.86 Yes 42 87.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59925383 - NM_032043 BRIP1 0 . . . 2.59 0 34 7.07 Yes 40 1.13 Yes 0 0 No -33 0.81 Yes 30 63.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68767721 + NM_133509 RAD51B 0 . . . 8.16 89.54 25 6.08 Yes 3 0.57 No 0 0 No -24 0.97 Yes 43 53.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68521313 + NM_133509 RAD51B 0 . . . 6.73 73.65 13 5.11 No 13 0.5 No 0 0 No -24 0.59 No 41 67.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104167102 - NM_001100119 XRCC3 0 . . . 3.78 77.65 27 4.05 No 50 1.14 Yes 0 0 No -26 0.88 Yes 50 44.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108138189 + NM_000051 ATM 0 . . . 1.39 0 36 5.41 No 35 0.81 Yes 0 0 No -26 0.5 No 28 66.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6031604 - NM_000535 PMS2 0 . . . 7.66 90.63 22 4.35 No 6 0.9 Yes 0 0 No -21 0.91 Yes 38 77.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104176718 - NM_001100119 XRCC3 0 . . . 4.68 80.4 24 5 No 21 1.1 Yes 0 0 No -23 0.74 Yes 37 62.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68452989 + NM_133509 RAD51B 0 . . . 1.24 68.87 12 4.69 No 57 -4.11 No 0 0 No -7 0.38 No 51 49.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59817082 - NM_032043 BRIP1 0 . . . 11.9 79.51 15 5.2 No 8 1.39 Yes 0 0 No -48 0.56 No 40 61.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84392403 - NM_139076 FAM175A 0 . . . 3.27 80.22 13 3.72 No 67 -4.97 No 0 0 No -19 0.6 No 48 83.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190662347 + NM_000534 PMS1 0 . . . 6.97 81.01 16 5.39 No 7 0.96 Yes 0 0 No -51 0.79 Yes 46 69.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37035639 + NM_000249 MLH1 0 . . . 2.23 0 38 4.85 No 22 0.09 No 0 0 No -37 0.86 Yes 30 79.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108171957 + NM_000051 ATM 0 . . . 0.32 67.85 36 4.18 No 71 0.73 No 0 0 No -28 0.61 No 51 45.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68333351 + NM_133509 RAD51B 0 . . . 4.2 86.18 21 4.23 No -4 -2.04 No 0 0 No -20 0.39 No 35 79.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59788324 - NM_032043 BRIP1 0 . . . 3.48 71.15 24 4.4 No 10 1.37 Yes 0 0 No -14 0.47 No 48 95.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104174289 - NM_001100119 XRCC3 0 . . . 4.85 70.94 17 3.78 No 41 -2.76 No 0 0 No -27 0.69 Yes 45 61.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108190246 + NM_000051 ATM 0 . . . 4.06 71.94 25 5.29 No 4 0.73 No 0 0 No -21 0.58 No 35 63.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37084827 + NM_000249 MLH1 0 . . . 3.27 68.95 21 4.62 No 16 0.57 No 0 0 No -23 0.8 Yes 42 86.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68388917 + NM_133509 RAD51B 0 . . . 8.54 77.31 27 5.17 No 11 1.45 Yes 0 0 No -21 0.52 No 47 86.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108178291 + NM_000051 ATM 0 . . . 5.38 84.47 29 6.22 Yes 34 0.44 No 0 0 No -25 0.54 No 45 65.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47679375 + NM_000251 MSH2 0 . . . 4.38 84.41 26 5.67 Yes 28 1.42 Yes 0 0 No -25 0.6 No 32 79.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37082185 + NM_000249 MLH1 0 . . . 6.09 76.47 15 4.52 No 56 -2.75 No 0 0 No -21 0.55 No 39 45.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29083643 - NM_001005735 CHEK2 0 . . . 1.04 78.6 16 4.64 No 2 1.53 Yes 0 0 No -35 0.86 Yes 39 62.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68994323 + NM_133509 RAD51B 0 . . . 4.69 70.1 61 8.66 Yes 4 -0.43 No 0 0 No -24 0.35 No 29 69.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68359734 + NM_133509 RAD51B 0 . . . 3.01 68.8 57 7.42 Yes 61 1.12 Yes 0 0 No -32 0.63 No 54 26.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68467269 + NM_133509 RAD51B 0 . . . 4.28 74.35 32 6 Yes 70 0.94 Yes 0 0 No -30 0.35 No 43 88.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190701840 + NM_000534 PMS1 0 . . . 3.42 69.38 18 4.9 No 18 0.54 No 0 0 No -22 0.76 Yes 40 60.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69147845 + NM_133509 RAD51B 0 . . . 2.27 76.44 33 6.3 Yes 20 0.23 No 0 0 No -32 0.64 No 46 57.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68885876 + NM_133509 RAD51B 0 . . . 5.55 72.89 26 4.99 No 23 0.56 No 0 0 No -21 0.27 No 35 58.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68962734 + NM_133509 RAD51B 0 . . . 0.61 63.69 19 4.36 No 0 0.7 No 0 0 No -33 0.76 Yes 58 41.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68602980 + NM_133509 RAD51B 0 . . . 6.12 84.57 25 5.31 No 11 0.58 No 0 0 No -22 0.77 Yes 40 75.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68809558 + NM_133509 RAD51B 0 . . . 4.6 0 21 5.1 No 20 0.61 No 0 0 No -20 0.81 Yes 38 93.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45794441 - NM_001048171 MUTYH 0 . . . 3.3 74.91 32 7.57 Yes 1 0.89 Yes 0 0 No -31 0.6 No 57 39.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215665553 - NM_000465 BARD1 0 . . . 4.77 80.31 29 5.56 Yes 72 -3.97 No 0 0 No -28 0.78 Yes 47 60.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68294826 + NM_133509 RAD51B 0 . . . 6.23 73.76 20 4.42 No 8 0.43 No 0 0 No -28 0.35 No 50 50.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68931483 + NM_133509 RAD51B 0 . . . 2.22 68.15 22 4.9 No 5 1.5 Yes 0 0 No -56 0.32 No 45 73.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68910520 + NM_133509 RAD51B 0 . . . 4.3 84.16 21 4.67 No 5 0.56 No 0 0 No -20 0.85 Yes 49 61.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47713304 + NM_000251 MSH2 0 . . . 0.72 0 21 6.87 Yes 38 0.08 No 0 0 No -29 0.46 No 43 69.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108140236 + NM_000051 ATM 0 . . . 1.78 82.74 33 6.24 Yes 56 -1.24 No 0 0 No -32 0.85 Yes 19 56.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47795216 + NM_000251 MSH2 0 . . . 1.22 63.42 15 3.83 No 1 0.05 No 0 0 No -58 0.61 No 57 60.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45796877 - NM_001048171 MUTYH 0 . . . 1.06 80.22 21 6.24 Yes 13 0.25 No 0 0 No -32 0.65 No 45 88.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47702859 + NM_000251 MSH2 0 . . . 4.38 76.5 23 4.79 No 61 -6.29 No 0 0 No -22 0.94 Yes 54 61.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68790172 + NM_133509 RAD51B 0 . . . 4.67 75.62 43 6.48 Yes 56 1.1 Yes 0 0 No -21 0.74 Yes 53 80.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59926504 - NM_032043 BRIP1 0 . . . 0.76 69.54 18 5.14 No 68 -4.81 No 0 0 No -27 0.64 No 23 34.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68427186 + NM_133509 RAD51B 0 . . . 9.33 82.5 27 5.72 Yes 76 1.02 Yes 0 0 No -29 0.64 No 49 77.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59805170 - NM_032043 BRIP1 0 . . . 4.53 71.58 73 9.17 Yes -1 0.43 No 0 0 No -50 0.24 No 31 48.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68718109 + NM_133509 RAD51B 0 . . . 1.9 88.13 15 5.43 No 44 0.4 No 0 0 No -23 0.75 Yes 50 47.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69006586 + NM_133509 RAD51B 0 . . . 2.73 66.2 67 8.07 Yes 57 1.05 Yes 0 0 No -35 0.55 No 57 33.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47738045 + NM_000251 MSH2 0 . . . 1.91 62 43 7.11 Yes 68 -5.27 No 0 0 No -25 0.86 Yes 44 51.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68478885 + NM_133509 RAD51B 0 . . . 1.71 0 44 6.9 Yes -1 1.16 Yes 0 0 No -23 0.82 Yes 51 47.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68588297 + NM_133509 RAD51B 0 . . . 0.01 60.77 16 5.1 No 58 0.77 Yes 0 0 No -22 0.55 No 50 54.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190676998 + NM_000534 PMS1 0 . . . 2.05 77.69 42 5.76 Yes 58 -4.42 No 0 0 No -27 0.57 No 53 47.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68869694 + NM_004360 CDH1 0 . . . 3.08 63.8 28 5.07 No 46 0.41 No 0 0 No -27 0.77 Yes 42 40.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94220628 - NM_005591 MRE11 0 . . . 3.9 74.28 32 5.4 No -1 1.35 Yes 0 0 No -24 0.75 Yes 28 74.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32902707 + NM_000059 BRCA2 0 . . . 2.9 70.58 21 4.73 No 0 1.21 Yes 0 0 No -20 0.75 Yes 43 63.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68913139 + NM_133509 RAD51B 0 . . . 4.16 80.41 50 4.46 No 27 1.41 Yes 0 0 No -29 0.71 Yes 43 81.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69009048 + NM_133509 RAD51B 0 . . . 0.6 70.94 34 4.75 No 74 1.89 Yes 0 0 No -26 0.69 Yes 26 56.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131920829 + NM_005732 RAD50 0 . . . 6.69 82.32 17 5.29 No 16 0.12 No 0 0 No -21 0.51 No 41 57.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68773843 + NM_133509 RAD51B 0 . . . 6.14 0 21 5.07 No 42 0.01 No 0 0 No -45 0.6 No 49 73.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215626776 - NM_000465 BARD1 0 . . . 1.55 69.17 30 5.86 Yes 56 0.26 No 0 0 No -29 0.44 No 46 62.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48023240 + NM_000179 MSH6 0 . . . 5.48 79.53 18 4.69 No 6 0.31 No 0 0 No -49 0.65 No 48 76.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68973950 + NM_133509 RAD51B 0 . . . 7.58 85.32 18 4.9 No 10 1.77 Yes 0 0 No -38 0.7 Yes 48 53.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69031638 + NM_133509 RAD51B 0 . . . 6.09 66.71 27 4.67 No 50 -2.06 No 0 0 No -26 0.58 No 48 28.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68972288 + NM_133509 RAD51B 0 . . . 3.97 84.41 25 4.74 No 64 0.72 No 0 0 No -24 0.83 Yes 38 70.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47676685 + NM_000251 MSH2 0 . . . 0.42 74.73 16 6.16 Yes 33 1.05 Yes 0 0 No -28 0.43 No 25 79.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105198865 + NM_021930 RINT1 0 . . . 0.58 69.43 13 6.01 Yes 18 0.81 Yes 0 0 No -24 0.61 No 20 53.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68716612 + NM_133509 RAD51B 0 . . . 0.06 67.81 31 6.08 Yes 37 -3.38 No 0 0 No -30 0.76 Yes 30 41.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47651104 + NM_000251 MSH2 0 . . . 0.66 70.37 22 6.73 Yes 45 1.37 Yes 0 0 No -21 0.96 Yes 35 52.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68628508 + NM_133509 RAD51B 0 . . . 8.58 78.86 33 6 Yes 24 1.14 Yes 0 0 No -32 0.81 Yes 34 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32944293 + NM_000059 BRCA2 0 . . . 8.94 82.75 25 9.27 Yes 20 0.11 No 0 0 No -24 0.74 Yes 37 51.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59846294 - NM_032043 BRIP1 0 . . . 8.19 76.87 46 5.41 No 40 0.65 No 0 0 No -20 0.8 Yes 40 77.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47761004 + NM_000251 MSH2 0 . . . 1.98 0 15 5.28 No 26 0.34 No 0 0 No -27 0.85 Yes 40 29.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190718506 + NM_000534 PMS1 0 . . . 2.95 70.85 18 5.38 No 23 1.61 Yes 0 0 No -22 0.7 Yes 40 69.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23636169 - NM_024675 PALB2 0 . . . 5.25 72.74 17 5.29 No -2 0.01 No 0 0 No -22 0.68 Yes 44 60.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68425585 + NM_133509 RAD51B 0 . . . 1.84 81.21 17 8.83 Yes 8 0 No 0 0 No -32 0.59 No 50 68.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190731815 + NM_000534 PMS1 0 . . . 6.02 67.23 19 4.8 No 60 -4.54 No 0 0 No -57 0.38 No 48 53.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59903881 - NM_032043 BRIP1 0 . . . 0.18 70.62 15 3.86 No 52 1.1 Yes 0 0 No -35 0.93 Yes 27 90.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59912743 - NM_032043 BRIP1 0 . . . 4.47 77.14 20 4.9 No 65 0.76 No 0 0 No -19 0.45 No 42 44.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071217 + NM_133509 RAD51B 0 . . . 0.05 0 18 5.57 Yes 6 1.69 Yes 0 0 No -24 0.52 No 52 55.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68601019 + NM_133509 RAD51B 0 . . . 2.12 71.02 59 8.93 Yes 68 1.1 Yes 0 0 No -58 0.3 No 48 64.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94214362 - NM_005591 MRE11 0 . . . 0.02 0 21 4.47 No 45 0.6 No 0 0 No -20 0.82 Yes 34 42.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59833314 - NM_032043 BRIP1 0 . . . 2.29 58.93 27 8.6 Yes 62 -4.09 No 0 0 No -26 0.77 Yes 41 41.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47721286 + NM_000251 MSH2 0 . . . 2.73 78.62 20 4.3 No 27 0.05 No 0 0 No -31 0.73 Yes 31 65.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215636218 - NM_000465 BARD1 0 . . . 3.01 83.94 45 6.62 Yes 11 1.66 Yes 0 0 No -44 0.49 No 47 54.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84406543 - NM_139076 FAM175A 0 . . . 5.5 75.5 29 5.29 No 67 1.25 Yes 0 0 No -28 0.74 Yes 42 60.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68714098 + NM_133509 RAD51B 0 . . . 4.18 75.73 18 7.58 Yes 29 0.07 No 0 0 No -22 0.6 No 47 33.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59763812 - NM_032043 BRIP1 0 . . . 3.37 73.21 13 4.36 No 19 -2.23 No 0 0 No -37 0.61 No 42 36.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59841189 - NM_032043 BRIP1 0 . . . 5.09 81.51 22 4.33 No -4 1.01 Yes 0 0 No -30 0.5 No 49 95.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32954210 + NM_000059 BRCA2 0 . . . 1.22 0 13 4.36 No 6 0.11 No 0 0 No -28 0.63 No 52 86.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68729780 + NM_133509 RAD51B 0 . . . 7.71 83.94 28 7.28 Yes 47 1.02 Yes 0 0 No -27 0.68 Yes 42 30.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104163013 - NM_001100119 XRCC3 0 . . . 0.28 74.42 46 7.36 Yes 57 0.61 No 0 0 No -32 0.3 No 45 55.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23623335 - NM_024675 PALB2 0 . . . 4.54 75.97 52 9.27 Yes 14 0.52 No 0 0 No -51 0.52 No 47 32.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47748989 + NM_000251 MSH2 0 . . . 5.39 83.13 19 4.97 No 40 -2.83 No 0 0 No -28 0.53 No 49 56.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68808053 + NM_004360 CDH1 0 . . . 1.04 74.11 26 4.57 No 57 0.63 No 0 0 No -22 0.43 No 55 54.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89693097 + NM_000314 PTEN 0 . . . 9.37 92.67 16 5.04 No 62 1.18 Yes 0 0 No -20 0.68 Yes 42 51.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69004614 + NM_133509 RAD51B 0 . . . 6.33 80.98 28 5.74 Yes 53 1.04 Yes 0 0 No -27 0.82 Yes 37 69.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32911774 + NM_000059 BRCA2 0 . . . 0.7 79 19 4.87 No 5 0.51 No 0 0 No -22 0.81 Yes 46 82.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68677497 + NM_133509 RAD51B 0 . . . 0.52 69.23 17 4.02 No 74 -5.78 No 0 0 No -16 0.57 No 42 20.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59803502 - NM_032043 BRIP1 0 . . . 2.25 71.45 26 7.55 Yes 54 1.15 Yes 0 0 No -25 0.54 No 45 54.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108192754 + NM_000051 ATM 0 . . . 3.94 72.48 27 5.75 Yes 22 1.21 Yes 0 0 No -23 0.77 Yes 51 45.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68722953 + NM_133509 RAD51B 0 . . . 6.57 86.46 23 4.8 No 62 -2.97 No 0 0 No -22 0.29 No 47 62.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37080067 + NM_000249 MLH1 0 . . . 1.96 70.32 19 4.3 No 68 0.96 Yes 0 0 No -24 0.62 No 45 77.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68524191 + NM_133509 RAD51B 0 . . . 0.45 67.44 13 4.36 No 4 0.54 No 0 0 No -17 0.5 No 41 54.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68793335 + NM_133509 RAD51B 0 . . . 4.27 80.58 31 4.57 No 5 0.45 No 0 0 No -27 0.51 No 37 60.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68872280 + NM_133509 RAD51B 0 . . . 1.07 70.04 47 5.01 No 72 0.88 Yes 0 0 No -31 0.4 No 45 55.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68349056 + NM_133509 RAD51B 0 . . . 7.04 81.85 27 5.9 Yes 3 1.26 Yes 0 0 No -26 0.74 Yes 37 59.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68877164 + NM_133509 RAD51B 0 . . . 2.97 0 15 5.92 Yes 41 0.75 No 0 0 No -21 0.43 No 46 47.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68844276 + NM_004360 CDH1 0 . . . 0.07 72.39 29 5.29 No 51 -2.26 No 0 0 No -21 0.79 Yes 50 88.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94177023 - NM_005591 MRE11 0 . . . 4.02 0 36 6.16 Yes 17 0.81 Yes 0 0 No -35 0.9 Yes 41 30.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23630821 - NM_024675 PALB2 0 . . . 2.09 75.25 19 5.51 No 31 0.55 No 0 0 No -28 0.66 Yes 47 41.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29108692 - NM_001005735 CHEK2 0 . . . 0.28 64.21 29 5.66 Yes 55 1.1 Yes 0 0 No -28 0.75 Yes 32 46.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68867119 + NM_133509 RAD51B 0 . . . 4.89 86.54 21 5.04 No 1 1.12 Yes 0 0 No -20 0.53 No 51 87.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190675596 + NM_000534 PMS1 0 . . . 5.15 71.96 10 4 No 71 0.8 Yes 0 0 No -29 0.5 No 44 73.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68974129 + NM_133509 RAD51B 0 . . . 1.36 76.87 24 3.75 No 3 0.91 Yes 0 0 No -28 0.86 Yes 35 48.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59871574 - NM_032043 BRIP1 0 . . . 7.11 88.31 19 4.74 No 12 1.09 Yes 0 0 No -25 0.47 No 46 49.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37038957 + NM_000249 MLH1 0 . . . 1.08 78.75 16 4.69 No 62 0.8 Yes 0 0 No -41 0.85 Yes 53 59.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37045027 + NM_000249 MLH1 0 . . . 2.24 80.12 25 5.37 No 69 0.84 Yes 0 0 No -24 0.69 Yes 47 68.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59824619 - NM_032043 BRIP1 0 . . . 0.65 0 23 5.63 Yes 53 1.34 Yes 0 0 No -22 0.64 No 42 67.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69122195 + NM_133509 RAD51B 0 . . . 2.95 82.61 20 5.92 Yes 16 0.13 No 0 0 No -30 0.72 Yes 36 75.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47702693 + NM_000251 MSH2 0 . . . 3.2 70.99 13 5.48 No 49 0.33 No 0 0 No -25 0.3 No 42 39.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47802800 + NM_000251 MSH2 0 . . . 6.67 72.2 14 5.12 No 74 0.01 No 0 0 No -19 0.6 No 39 81.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108151832 + NM_000051 ATM 0 . . . 1.91 71.16 22 3.48 No 36 1.08 Yes 0 0 No -21 0.52 No 28 60.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94167649 - NM_005591 MRE11 0 . . . 2.33 77.2 33 5.66 Yes 10 0.87 Yes 0 0 No -22 0.6 No 48 86.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68816128 + NM_133509 RAD51B 0 . . . 3.88 84 26 5.39 No 2 0.98 Yes 0 0 No -25 0.81 Yes 13 58.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68879022 + NM_133509 RAD51B 0 . . . 2.65 79.33 10 4.97 No 44 2.23 Yes 0 0 No -21 0.4 No 14 53.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47764784 + NM_000251 MSH2 0 . . . 8.11 80.09 20 5.55 No 74 0.97 Yes 0 0 No -24 0.9 Yes 49 79.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190663358 + NM_000534 PMS1 0 . . . 2.03 67.68 30 5.66 Yes 31 -2.62 No 0 0 No -29 0.88 Yes 35 45.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68559971 + NM_133509 RAD51B 0 . . . 9.26 88.87 39 9.6 Yes 47 -2.95 No 0 0 No -38 0.7 Yes 44 54.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37082132 + NM_000249 MLH1 0 . . . 5.97 75.74 19 4.34 No 45 0.79 Yes 0 0 No -21 0.72 Yes 44 95.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68727532 + NM_133509 RAD51B 0 . . . 0.56 66.08 26 5.48 No 67 1 Yes 0 0 No -25 0.9 Yes 43 82.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68726480 + NM_133509 RAD51B 0 . . . 3.33 0 22 5.49 No 31 1.23 Yes 0 0 No -21 0.75 Yes 27 95.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89650126 + NM_000314 PTEN 0 . . . 5.44 79.67 22 5.29 No 36 1.27 Yes 0 0 No -21 0.86 Yes 45 79.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68938888 + NM_133509 RAD51B 0 . . . 8.14 79.11 16 4.58 No 5 0.53 No 0 0 No -19 0.71 Yes 46 79.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131909756 + NM_005732 RAD50 0 . . . 0.02 61.71 23 4.31 No 58 0.05 No 0 0 No -22 0.49 No 39 83.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105191829 + NM_021930 RINT1 0 . . . 4.24 79.89 12 4.79 No -1 0.51 No 0 0 No -17 0.38 No 45 92.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69002656 + NM_133509 RAD51B 0 . . . 1.88 67.96 25 4.31 No 12 0.7 No 0 0 No -24 0.66 No 46 88.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68354175 + NM_133509 RAD51B 0 . . . 0.04 0 23 4.79 No 58 0.87 Yes 0 0 No -25 0.62 No 44 49.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59820620 - NM_032043 BRIP1 0 . . . 3.82 74.66 19 4.89 No 47 0.7 No 0 0 No -18 0.37 No 43 60.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190687628 + NM_000534 PMS1 0 . . . 4.36 76.94 25 5.57 Yes 14 1.04 Yes 0 0 No -24 0.84 Yes 51 47.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68780757 + NM_133509 RAD51B 0 . . . 1.74 0 20 5.11 No 6 0.37 No 0 0 No -25 0.9 Yes 52 41.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41001334 + NM_001164269 RAD51 0 . . . 1.28 68.82 33 5.94 Yes 17 -1.18 No 0 0 No -32 0.76 Yes 27 26.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59866355 - NM_032043 BRIP1 0 . . . 2.7 86.33 22 2.79 No 38 0.23 No 0 0 No -21 0.53 No 50 81.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108172290 + NM_000051 ATM 0 . . . 6.13 74.56 33 6.24 Yes 55 0.76 No 0 0 No -32 0.87 Yes 50 88.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47779878 + NM_000251 MSH2 0 . . . 1.64 79.96 15 3.92 No 67 -3.78 No 0 0 No -25 0.93 Yes 46 46.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69133777 + NM_133509 RAD51B 0 . . . 0.4 76.79 15 4.89 No 16 0.24 No 0 0 No -24 0.62 No 42 69.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89630422 + NM_000314 PTEN 0 . . . 6.29 75.76 28 4.77 No 70 -2.49 No 0 0 No -26 0.83 Yes 46 75.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29124589 - NM_001005735 CHEK2 0 . . . 2.95 86.33 33 6.1 Yes 33 1.08 Yes 0 0 No -27 0.74 Yes 42 96.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33437958 - NM_002878 RAD51D 0 . . . 4.7 80.12 36 7.96 Yes 6 1.3 Yes 0 0 No -35 0.48 No 52 86.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190661619 + NM_000534 PMS1 0 . . . 1.89 72.48 17 4.83 No 61 1.02 Yes 0 0 No -23 0.81 Yes 34 66.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108123340 + NM_000051 ATM 0 . . . 7.27 81.92 17 5.3 No 8 0.33 No 0 0 No -17 0.62 No 44 62.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108160863 + NM_000051 ATM 0 . . . 1.98 80.49 10 3.17 No 20 0.22 No 0 0 No -38 0.55 No 44 60.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47704904 + NM_000251 MSH2 0 . . . 4.81 71.1 17 4.8 No 26 0.47 No 0 0 No -49 0.56 No 43 84.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108117226 + NM_000051 ATM 0 . . . 3.12 75.19 21 5.04 No 45 0.33 No 0 0 No -20 0.76 Yes 45 55.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41005582 + NM_001164269 RAD51 0 . . . 3.31 74.71 17 4.54 No 54 1.11 Yes 0 0 No -16 0.66 No 47 65.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68751363 + NM_133509 RAD51B 0 . . . 1.14 78.04 24 5.29 No 73 0.24 No 0 0 No -23 0.56 No 50 55.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29086609 - NM_001005735 CHEK2 0 . . . 1.62 0 26 5.65 Yes 22 1.09 Yes 0 0 No -25 0.88 Yes 36 93.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152357580 - NM_005431 XRCC2 0 . . . 1.36 0 42 9.29 Yes 40 0.37 No 0 0 No -36 0.54 No 37 72.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68411251 + NM_133509 RAD51B 0 . . . 3.95 81.67 53 8.06 Yes 23 0.47 No 0 0 No -24 0.66 Yes 48 48.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68923814 + NM_133509 RAD51B 0 . . . 1.64 74.7 30 5.51 No 7 0.91 Yes 0 0 No -30 0.61 No 51 56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68334771 + NM_133509 RAD51B 0 . . . 2.84 65.89 34 5.69 Yes 69 0.36 No 0 0 No -21 0.82 Yes 50 20.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47703628 + NM_000251 MSH2 0 . . . 2.26 61.93 22 5.74 Yes 55 0.26 No 0 0 No -21 0.86 Yes 38 80.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47631965 + NM_000251 MSH2 0 . . . 0.96 84.22 9 3.87 No 33 1.12 Yes 0 0 No -55 0.42 No 25 43.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41261451 - NM_007294 BRCA1 0 . . . 7.21 85.7 23 5.39 No 46 1.86 Yes 0 0 No -23 0.72 Yes 46 42.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68400088 + NM_133509 RAD51B 0 . . . 2.56 0 25 5.1 No 1 0.08 No 0 0 No -24 0.81 Yes 45 56.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68499640 + NM_133509 RAD51B 0 . . . 4.96 77.81 18 4.78 No 40 1.38 Yes 0 0 No -21 0.58 No 50 86.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41217219 - NM_007294 BRCA1 0 . . . 5.26 70.83 17 5.23 No 67 -1.93 No 0 0 No -23 0.38 No 53 41.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59755548 - NM_032043 BRIP1 0 . . . 0.06 66.79 28 6.48 Yes 61 1.38 Yes 0 0 No -27 0.93 Yes 51 67.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59810184 - NM_032043 BRIP1 0 . . . 2.62 79.86 22 4.69 No 55 0.6 No 0 0 No -21 0.57 No 52 51.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32942902 + NM_000059 BRCA2 0 . . . 3.35 81.06 14 5.29 No 15 0.01 No 0 0 No -57 0.43 No 49 76.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29087511 - NM_001005735 CHEK2 0 . . . 3.46 64.17 37 7.21 Yes 13 0.67 No 0 0 No -22 0.25 No 45 90.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41004341 + NM_001164269 RAD51 0 . . . 1.96 76.93 35 6.39 Yes 23 -2.18 No 0 0 No -34 0.62 No 44 78.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47641838 + NM_000251 MSH2 0 . . . 0.64 65.38 26 6 Yes 7 2.25 Yes 0 0 No -25 0.66 No 40 80.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108191040 + NM_000051 ATM 0 . . . 3.95 74.2 32 6 Yes 39 1.29 Yes 0 0 No -31 0.7 Yes 41 90.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59802668 - NM_032043 BRIP1 0 . . . 8.36 76.7 101 8.75 Yes 76 0.05 No 0 0 No -30 0.41 No 44 36.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33427358 - NM_002878 RAD51D 0 . . . 0.28 0 34 5.65 Yes 15 0.87 Yes 0 0 No -23 0.23 No 53 56.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68799127 + NM_133509 RAD51B 0 . . . 3.88 74.47 19 4.41 No 44 0.16 No 0 0 No -18 0.96 Yes 45 86.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68493941 + NM_133509 RAD51B 0 . . . 1.87 0 29 5.29 No 55 1.16 Yes 0 0 No -28 0.59 No 61 25.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68768902 + NM_133509 RAD51B 0 . . . 4.87 75.13 18 4.47 No 17 0.57 No 0 0 No -17 0.77 Yes 47 88.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59771721 - NM_032043 BRIP1 0 . . . 0.4 64.23 18 4.69 No 65 -5.65 No 0 0 No -17 0.8 Yes 49 29.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190723395 + NM_000534 PMS1 0 . . . 1.31 69.31 16 4.12 No 32 0.51 No 0 0 No -24 0.52 No 39 72.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59918098 - NM_032043 BRIP1 0 . . . 4.54 69.92 24 4.4 No 31 -0.81 No 0 0 No -23 0.85 Yes 40 72.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32925495 + NM_000059 BRCA2 0 . . . 2.73 74.04 27 5.74 Yes 19 0.61 No 0 0 No -29 0.85 Yes 39 64.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94176338 - NM_005591 MRE11 0 . . . 0.82 66.58 9 3.87 No 30 0.45 No 0 0 No -34 0.91 Yes 49 39.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32907322 + NM_000059 BRCA2 0 . . . 0.03 72.7 34 5.49 No 55 0.68 No 0 0 No -17 0.35 No 21 39.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68975072 + NM_133509 RAD51B 0 . . . 0.29 66.26 29 6.32 Yes 66 -4 No 0 0 No -28 0.8 Yes 37 36.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59923753 - NM_032043 BRIP1 0 . . . 0.61 49.28 24 6.48 Yes 12 0.15 No 0 0 No -23 0.84 Yes 46 20.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32958823 + NM_000059 BRCA2 0 . . . 2.2 77.21 33 5.89 Yes -1 0.58 No 0 0 No -32 0.83 Yes 50 30.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59838878 - NM_032043 BRIP1 0 . . . 5.69 85.32 23 4.86 No 5 1.58 Yes 0 0 No -18 0.45 No 53 74.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41198206 - NM_007294 BRCA1 0 . . . 0.09 74.68 18 5.79 Yes 4 0.41 No 0 0 No -17 0.31 No 54 68.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190728081 + NM_000534 PMS1 0 . . . 2.69 68.95 32 6.17 Yes 16 0.57 No 0 0 No -31 0.86 Yes 42 95.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68772829 + NM_004360 CDH1 0 . . . 8.43 92.69 16 5.17 No 34 0.36 No 0 0 No -22 0.55 No 45 70.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190651265 + NM_000534 PMS1 0 . . . 2.92 69.44 11 3.87 No 15 1.12 Yes 0 0 No -25 0.5 No 43 83.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68543564 + NM_133509 RAD51B 0 . . . 0.39 72.95 41 5.95 Yes 25 0.61 No 0 0 No -18 0.46 No 51 32.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108100324 + NM_000051 ATM 0 . . . 1.03 76.2 27 6.38 Yes 71 -5.71 No 0 0 No -26 0.9 Yes 39 83.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59839828 - NM_032043 BRIP1 0 . . . 3.02 68.99 17 4.69 No 8 1.58 Yes 0 0 No -24 0.29 No 50 50.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68550942 + NM_133509 RAD51B 0 . . . 6.29 75.11 20 5 No 1 1.35 Yes 0 0 No -25 0.76 Yes 45 58.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68824283 + NM_004360 CDH1 0 . . . 5.73 88.36 22 4.76 No 8 0.55 No 0 0 No -25 0.6 No 50 72.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89705411 + NM_000314 PTEN 0 . . . 2.84 72.12 29 5.35 No 68 -5.35 No 0 0 No -28 0.48 No 52 35.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1213420 + NM_000455 STK11 0 . . . 0.78 80.39 20 4.65 No 66 0.54 No 0 0 No -19 0.4 No 20 41.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52434910 - NM_004656 BAP1 0 . . . 0.67 0 16 3.68 No 76 -5.1 No 0 0 No -26 0.57 No 42 55.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68401561 + NM_133509 RAD51B 0 . . . 0.87 59.81 25 5.08 No 34 2.07 Yes 0 0 No -25 0.56 No 24 27.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68359473 + NM_133509 RAD51B 0 . . . 4.17 87.79 25 4.75 No 52 0.65 No 0 0 No -27 0.69 Yes 45 51.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68740522 + NM_133509 RAD51B 0 . . . 3.32 83.36 20 4.35 No 8 0.49 No 0 0 No -19 0.47 No 50 87.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68989342 + NM_133509 RAD51B 0 . . . 4.35 82.74 28 5.19 No 1 0.89 Yes 0 0 No -27 0.52 No 54 41.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59847511 - NM_032043 BRIP1 0 . . . 3.21 67.45 24 6.5 Yes 10 1.18 Yes 0 0 No -23 0.5 No 48 81.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59828236 - NM_032043 BRIP1 0 . . . 3.86 68.15 30 5.01 No 64 1.06 Yes 0 0 No -29 0.31 No 40 94.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131948111 + NM_005732 RAD50 0 . . . 0.08 57.08 18 5.21 No 46 0.23 No 0 0 No -22 0.64 No 46 54.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59912912 - NM_032043 BRIP1 0 . . . 6.96 76.73 21 5.05 No 60 1.59 Yes 0 0 No -20 0.49 No 37 51.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23645296 - NM_024675 PALB2 0 . . . 1.45 77.58 22 4.8 No 75 0.86 Yes 0 0 No -21 0.97 Yes 54 79.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90946080 - NM_002485 NBN 0 . . . 6.24 80 16 4.83 No 63 1.13 Yes 0 0 No -15 0.4 No 46 80.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32894447 + NM_000059 BRCA2 0 . . . 9.95 83.23 18 5.29 No 8 0.5 No 0 0 No -17 0.42 No 45 70.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29105147 - NM_001005735 CHEK2 0 . . . 4.05 68.18 22 6.04 Yes 46 0.33 No 0 0 No -28 0.6 No 41 89.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89654179 + NM_000314 PTEN 0 . . . 8.58 79.07 61 7.54 Yes 8 0.67 No 0 0 No -41 0.7 Yes 44 86.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68558818 + NM_133509 RAD51B 0 . . . 5.74 78.04 17 6.93 Yes 60 0.46 No 0 0 No -33 0.33 No 49 79.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108193544 + NM_000051 ATM 0 . . . 6.63 83.97 17 4.66 No 2 1.21 Yes 0 0 No -24 0.71 Yes 45 43.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68578761 + NM_133509 RAD51B 0 . . . 0.26 0 14 5.2 No 30 1.92 Yes 0 0 No -40 0.5 No 51 86.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56794031 + NM_058216 RAD51C 0 . . . 1.63 72.33 30 4.64 No 15 -2.75 No 0 0 No -29 0.59 No 23 74.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94218072 - NM_005591 MRE11 0 . . . 5.42 77.31 21 4.61 No 73 0.96 Yes 0 0 No -21 0.54 No 47 71.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68896842 + NM_133509 RAD51B 0 . . . 5.86 81.73 24 5.48 No 35 0.64 No 0 0 No -23 0.54 No 41 71.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215619522 - NM_000465 BARD1 0 . . . 4.78 72.81 31 4.35 No 28 0.93 Yes 0 0 No -30 0.62 No 47 57.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41237184 - NM_007294 BRCA1 0 . . . 0.18 70.98 31 6.08 Yes 45 0.56 No 0 0 No -30 0.85 Yes 43 42.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68354927 + NM_133509 RAD51B 0 . . . 1.86 71.61 25 5.57 Yes 19 0.81 Yes 0 0 No -24 0.78 Yes 38 63.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68987269 + NM_133509 RAD51B 0 . . . 5.33 73.51 23 4.81 No 54 0.51 No 0 0 No -22 0.74 Yes 48 52.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89640556 + NM_000314 PTEN 0 . . . 5.95 77.06 26 5.48 No 32 0.72 No 0 0 No -30 0.35 No 40 53.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40991909 + NM_001164269 RAD51 0 . . . 3.44 80.7 16 5.91 Yes 8 0.23 No 0 0 No -29 0.52 No 50 91.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48013616 + NM_000179 MSH6 0 . . . 3.07 82.74 26 5.18 No 57 0.97 Yes 0 0 No -25 0.7 Yes 44 55.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68956001 + NM_133509 RAD51B 0 . . . 2.63 69.99 17 4.63 No 34 -3.15 No 0 0 No -24 0.77 Yes 47 43.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68967379 + NM_133509 RAD51B 0 . . . 3.79 84.67 19 4.84 No 21 0.56 No 0 0 No -9 0.46 No 37 81.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47799906 + NM_000251 MSH2 0 . . . 3.06 71.48 16 5.48 No 4 -2.02 No 0 0 No -23 0.46 No 43 56.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41202529 - NM_007294 BRCA1 0 . . . 1.41 84.22 19 5.83 Yes 33 1.12 Yes 0 0 No -27 0.81 Yes 50 51.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215656188 - NM_000465 BARD1 0 . . . 4.13 74.29 23 5.11 No 8 0.8 Yes 0 0 No -22 0.41 No 50 92.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68669677 + NM_133509 RAD51B 0 . . . 5.64 75.27 27 5.28 No 52 0.56 No 0 0 No -26 0.8 Yes 49 85.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69067916 + NM_133509 RAD51B 0 . . . 1.52 72.8 22 4.58 No 67 0.62 No 0 0 No -22 0.51 No 52 52.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69123757 + NM_133509 RAD51B 0 . . . 6.71 75.15 27 5.86 Yes 61 -3.81 No 0 0 No -26 0.49 No 42 94.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75490332 - NM_001040108 MLH3 0 . . . 4.77 83.2 15 5.11 No 18 0.41 No 0 0 No -25 0.32 No 39 71.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29084918 - NM_001005735 CHEK2 0 . . . 1.24 62.13 53 6.19 Yes -1 0.74 No 0 0 No -22 0.54 No 40 28.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59937828 - NM_032043 BRIP1 0 . . . 3.66 75.25 26 3.72 No 33 0.89 Yes 0 0 No -25 0.81 Yes 20 35.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6015569 - NM_000535 PMS2 0 . . . 2 79.1 23 5.29 No 70 0.63 No 0 0 No -21 0.73 Yes 51 65.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84397426 - NM_139076 FAM175A 0 . . . 0.96 0 10 3.87 No 56 0.42 No 0 0 No -38 0.67 Yes 32 76.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89643828 + NM_000314 PTEN 0 . . . 0.18 66.18 31 3.95 No 32 0.15 No 0 0 No -25 0.58 No 45 66.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215599132 - NM_000465 BARD1 0 . . . 4 81.96 22 4.9 No 34 -3.2 No 0 0 No -21 0.97 Yes 43 81.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108234788 + NM_000051 ATM 0 . . . 2.66 0 49 7.16 Yes 1 0.49 No 0 0 No -21 0.8 Yes 48 62.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48025487 + NM_000179 MSH6 0 . . . 3.77 62.31 29 5.89 Yes 15 0.5 No 0 0 No -21 0.63 No 31 53.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59891333 - NM_032043 BRIP1 0 . . . 2.17 75.28 21 5.1 No 13 0 No 0 0 No -20 0.69 Yes 45 92.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108110844 + NM_000051 ATM 0 . . . 3.46 85.56 18 4.51 No 24 -1.67 No 0 0 No -47 0.77 Yes 43 49.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94210858 - NM_005591 MRE11 0 . . . 1.3 59.1 14 4.93 No 37 1.25 Yes 0 0 No -38 0.42 No 21 51.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59920335 - NM_032043 BRIP1 0 . . . 5.94 81.03 26 5.39 No 43 1.19 Yes 0 0 No -25 0.87 Yes 38 63.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47789153 + NM_000251 MSH2 0 . . . 3.65 74.58 31 5.29 No 5 0.68 No 0 0 No -30 0.83 Yes 46 64.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29096331 - NM_001005735 CHEK2 0 . . . 0.19 74.23 70 5.76 Yes 39 -2.78 No 0 0 No -30 0.6 No 36 46.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69124402 + NM_133509 RAD51B 0 . . . 5.98 75.95 19 5.74 Yes 22 0.72 No 0 0 No -28 0.55 No 36 92.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68896412 + NM_133509 RAD51B 0 . . . 8.99 81.67 14 4.47 No 71 0.42 No 0 0 No -16 0.39 No 47 77.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131971936 + NM_005732 RAD50 0 . . . 1.1 81.04 20 3.61 No 70 1.43 Yes 0 0 No -25 0.77 Yes 52 25.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59781727 - NM_032043 BRIP1 0 . . . 0.06 64.3 27 5.36 No 30 0.68 No 0 0 No -26 0.89 Yes 42 65.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131918826 + NM_005732 RAD50 0 . . . 1.97 73.58 45 6.43 Yes 38 0.43 No 0 0 No -34 0.65 No 37 49.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68901438 + NM_133509 RAD51B 0 . . . 4.87 80.79 32 5.53 No 33 2.45 Yes 0 0 No -25 0.6 No 46 41.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23613789 - NM_024675 PALB2 0 . . . 6.5 86.2 28 4.09 No 9 1.12 Yes 0 0 No -22 0.57 No 49 89.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59888226 - NM_032043 BRIP1 0 . . . 1.45 58.35 20 4.99 No 68 0.38 No 0 0 No -23 0.69 Yes 49 72.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69138404 + NM_133509 RAD51B 0 . . . 11.36 86.88 19 7.39 Yes 53 1.5 Yes 0 0 No -28 0.36 No 39 76.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32970292 + NM_000059 BRCA2 0 . . . 3.6 85.02 17 6.4 Yes 4 1.05 Yes 0 0 No -20 0.4 No 54 77.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68791863 + NM_004360 CDH1 0 . . . 2.81 82.77 25 4.98 No 57 0.73 No 0 0 No -38 0.73 Yes 49 78.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94205036 - NM_005591 MRE11 0 . . . 2.29 76.14 12 4.24 No 33 0.95 Yes 0 0 No -50 0.49 No 34 78.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108127167 + NM_000051 ATM 0 . . . 4.21 85.7 20 5.36 No 0 0.4 No 0 0 No -33 0.17 No 49 51.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68806629 + NM_004360 CDH1 0 . . . 1.93 84.79 53 7.65 Yes 63 -3.88 No 0 0 No -27 0.54 No 49 39.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108142237 + NM_000051 ATM 0 . . . 7.75 76.57 24 4.9 No 2 1.44 Yes 0 0 No -23 0.58 No 46 74.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6027911 - NM_000535 PMS2 0 . . . 0.89 73.01 11 4.12 No 58 0.41 No 0 0 No -12 0.3 No 53 54.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105190337 + NM_021930 RINT1 0 . . . 0.24 70.72 18 4.8 No 29 0.21 No 0 0 No -21 0.73 Yes 46 55.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94227685 - NM_005591 MRE11 0 . . . 2.67 61.32 22 3.12 No 53 0.99 Yes 0 0 No -27 0.34 No 57 30.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84404025 - NM_139076 FAM175A 0 . . . 1.02 71.36 28 5.48 No 20 0.91 Yes 0 0 No -27 0.85 Yes 50 44.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68774373 + NM_004360 CDH1 0 . . . 0.6 81.32 25 5.1 No 37 1.26 Yes 0 0 No -24 0.9 Yes 48 37.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37040907 + NM_000249 MLH1 0 . . . 1.75 0 9 3.87 No 66 -4.72 No 0 0 No -38 0.64 No 46 42.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104169418 - NM_001100119 XRCC3 0 . . . 0.85 71.16 9 6.91 Yes 35 -3.42 No 0 0 No -43 0.81 Yes 43 46.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47669040 + NM_000251 MSH2 0 . . . 3.39 78.96 18 4.69 No 4 1.13 Yes 0 0 No -37 0.64 No 43 73.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47679537 + NM_000251 MSH2 0 . . . 5.87 92.4 34 6.18 Yes 5 1.08 Yes 0 0 No -33 0.78 Yes 53 74.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108226291 + NM_000051 ATM 0 . . . 3.42 85.32 18 5.18 No 45 -3.62 No 0 0 No -17 0.55 No 51 64.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90944082 - NM_002485 NBN 0 . . . 7.72 87.63 22 6.51 Yes 60 2.05 Yes 0 0 No -21 0.57 No 42 85.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32971661 + NM_000059 BRCA2 0 . . . 6.48 69.52 9 3.87 No 54 1.44 Yes 0 0 No -29 0.55 No 52 45.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59933259 - NM_032043 BRIP1 0 . . . 10.07 82.13 18 4.8 No 59 1.32 Yes 0 0 No -21 0.64 No 35 76.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105175457 + NM_021930 RINT1 0 . . . 3.98 72.6 14 4.47 No 25 1.55 Yes 0 0 No -23 0.37 No 52 65.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68546164 + NM_133509 RAD51B 0 . . . 1.78 79 36 6.86 Yes 50 0.38 No 0 0 No -33 0.55 No 54 66.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68334208 + NM_133509 RAD51B 0 . . . 6.35 89.43 17 5.65 Yes 41 0.41 No 0 0 No -26 0.56 No 52 60.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40989935 + NM_001164269 RAD51 0 . . . 5.01 80.64 18 4.67 No 49 1.1 Yes 0 0 No -18 0.88 Yes 49 89.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68999344 + NM_133509 RAD51B 0 . . . 1.24 63.53 29 5.08 No 37 0.84 Yes 0 0 No -21 0.67 Yes 35 33.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105197812 + NM_021930 RINT1 0 . . . 1.9 66.54 19 4.9 No 75 -6.66 No 0 0 No -19 0.36 No 47 49.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215607800 - NM_000465 BARD1 0 . . . 1.56 68.99 38 6.28 Yes 34 0.66 No 0 0 No -30 0.63 No 41 59.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207238 - NM_007294 BRCA1 0 . . . 4.96 71.63 20 5.1 No 11 1.31 Yes 0 0 No -43 0.48 No 43 90.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68683904 + NM_133509 RAD51B 0 . . . 3.89 85.39 15 4.58 No 61 0.63 No 0 0 No -32 0.61 No 44 90.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47790935 + NM_000251 MSH2 0 . . . 1.33 0 14 4.86 No 65 0.78 Yes 0 0 No -22 0.37 No 40 60.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84399437 - NM_139076 FAM175A 0 . . . 1.52 61.46 18 5.25 No 20 1.52 Yes 0 0 No -53 0.58 No 38 92.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68513436 + NM_133509 RAD51B 0 . . . 0.27 64.93 76 9.36 Yes 70 -4.76 No 0 0 No -47 0.57 No 38 55.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94191829 - NM_005591 MRE11 0 . . . 2.2 68.72 22 4.34 No 75 0.26 No 0 0 No -46 0.49 No 49 77.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69107605 + NM_133509 RAD51B 0 . . . 1.2 70.41 32 4.45 No 44 -3.71 No 0 0 No -24 0.42 No 53 79.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94166028 - NM_005591 MRE11 0 . . . 2.6 72.81 24 4.77 No 61 -6.31 No 0 0 No -23 0.91 Yes 46 64.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68562909 + NM_133509 RAD51B 0 . . . 3.57 76.38 13 5.28 No 19 0.7 No 0 0 No -17 0.66 No 47 85.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68859262 + NM_133509 RAD51B 0 . . . 1.57 64.34 22 6.66 Yes 58 0.69 No 0 0 No -28 0.47 No 42 62.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108226220 + NM_000051 ATM 0 . . . 2.2 69.95 27 5.63 Yes 63 0.29 No 0 0 No -27 0.43 No 46 40.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6032245 - NM_000535 PMS2 0 . . . 0.75 0 25 4.57 No 44 -4.56 No 0 0 No -24 0.8 Yes 35 62.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94222725 - NM_005591 MRE11 0 . . . 5.95 80.5 34 5.73 Yes 36 -2.61 No 0 0 No -33 0.26 No 50 62.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68867822 + NM_133509 RAD51B 0 . . . 1.86 72.48 17 4 No 43 0.96 Yes 0 0 No -34 0.81 Yes 15 91.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105174697 + NM_021930 RINT1 0 . . . 3.6 85.02 20 6.4 Yes 4 1.2 Yes 0 0 No -19 0.83 Yes 54 46.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68546278 + NM_133509 RAD51B 0 . . . 0.11 73.2 24 4.86 No 38 0.72 No 0 0 No -23 0.86 Yes 49 39.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56795320 + NM_058216 RAD51C 0 . . . 3.55 82.63 21 4.79 No 6 -2.8 No 0 0 No -20 0.77 Yes 52 42.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41240896 - NM_007294 BRCA1 0 . . . 2.33 0 17 6 Yes 75 1.02 Yes 0 0 No -29 0.54 No 36 82.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75486990 - NM_001040108 MLH3 0 . . . 3.13 70.27 24 5 No 8 1.4 Yes 0 0 No -53 0.76 Yes 30 49.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47650358 + NM_000251 MSH2 0 . . . 6.28 86.9 17 4.8 No 33 1.46 Yes 0 0 No -38 0.25 No 50 92.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59863146 - NM_032043 BRIP1 0 . . . 6.96 84.69 34 9.56 Yes 23 1.25 Yes 0 0 No -33 0.84 Yes 44 47.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68792996 + NM_004360 CDH1 0 . . . 0.61 69.16 21 4.9 No 57 1.6 Yes 0 0 No -20 0.6 No 55 23.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37049868 + NM_000249 MLH1 0 . . . 5.92 82.31 20 4.57 No 58 1.16 Yes 0 0 No -19 0.61 No 55 46.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69014292 + NM_133509 RAD51B 0 . . . 1.69 71.71 13 4.53 No 33 -2.3 No 0 0 No -23 0.23 No 51 49.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47724941 + NM_000251 MSH2 0 . . . 4.78 72.78 33 6.8 Yes 23 1.6 Yes 0 0 No -24 0.25 No 45 73.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47783488 + NM_000251 MSH2 0 . . . 2.6 63.88 43 7.27 Yes 49 0.27 No 0 0 No -29 0.48 No 45 50.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68788363 + NM_004360 CDH1 0 . . . 0.2 63.42 45 7.13 Yes 49 -1.31 No 0 0 No -37 0.62 No 37 65.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68378851 + NM_133509 RAD51B 0 . . . 6.31 75.09 24 4.06 No 20 0.04 No 0 0 No -23 0.65 No 38 57.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104168202 - NM_001100119 XRCC3 0 . . . 1.89 0 20 5.47 No NA NA NA 0 0 No -19 0.77 Yes 44 83.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68464458 + NM_133509 RAD51B 0 . . . 1.23 68.67 18 4.9 No 20 1 Yes 0 0 No -17 0.66 No 38 52.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48013838 + NM_000179 MSH6 0 . . . 2.62 77.82 18 4.69 No 22 0.87 Yes 0 0 No -27 0.55 No 45 85.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89696364 + NM_000314 PTEN 0 . . . 3.93 73.93 22 4.73 No 26 0.56 No 0 0 No -25 0.74 Yes 44 33.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37048889 + NM_000249 MLH1 0 . . . 2.5 78.84 49 6.7 Yes 65 -2.97 No 0 0 No -36 0.52 No 49 84.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68817317 + NM_133509 RAD51B 0 . . . 7.04 73.17 21 5.14 No 14 0.13 No 0 0 No -20 0.42 No 44 56.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68288432 + NM_133509 RAD51B 0 . . . 0.8 76.57 20 5.08 No 8 0.47 No 0 0 No -19 0.68 Yes 50 87.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131946266 + NM_005732 RAD50 0 . . . 0.14 65.19 58 8.12 Yes 40 0.91 Yes 0 0 No -30 0.52 No 54 58.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190649589 + NM_000534 PMS1 0 . . . 0.37 0 36 6.48 Yes 8 -0.38 No 0 0 No -24 0.81 Yes 50 82.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41261445 - NM_007294 BRCA1 0 . . . 0.76 0 43 5.13 No 52 1.86 Yes 0 0 No -40 0.22 No 11 50.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131906228 + NM_005732 RAD50 0 . . . 0.31 0 31 6.92 Yes 16 1.02 Yes 0 0 No -30 0.85 Yes 42 91.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108144279 + NM_000051 ATM 0 . . . 0.27 74.73 32 5.74 Yes 33 1.1 Yes 0 0 No -28 0.58 No 25 82.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68288682 + NM_133509 RAD51B 0 . . . 2.1 81.05 24 5.18 No 74 0.09 No 0 0 No -23 0.53 No 43 53.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68810167 + NM_004360 CDH1 0 . . . 1.14 83.52 19 4.86 No 37 1.14 Yes 0 0 No -22 0.76 Yes 31 56.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59917556 - NM_032043 BRIP1 0 . . . 5.44 85.02 78 6.65 Yes 56 1.04 Yes 0 0 No -29 0.37 No 54 62.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190700749 + NM_000534 PMS1 0 . . . 1.69 81.02 25 3.88 No 29 -0.54 No 0 0 No -25 0.68 Yes 29 38.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108224537 + NM_000051 ATM 0 . . . 1.51 0 30 5.32 No 57 1.28 Yes 0 0 No -29 0.57 No 40 25.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68466606 + NM_133509 RAD51B 0 . . . 3.47 83.66 23 7.35 Yes 60 -4.31 No 0 0 No -22 0.88 Yes 50 66.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47738656 + NM_000251 MSH2 0 . . . 3.86 86.68 20 5.1 No 76 -4.53 No 0 0 No -19 0.79 Yes 30 56.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108218840 + NM_000051 ATM 0 . . . 1.31 0 28 5.13 No 18 0.42 No 0 0 No -27 0.41 No 40 54.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68691169 + NM_133509 RAD51B 0 . . . 4.08 77.53 33 6.22 Yes 31 1.16 Yes 0 0 No -22 0.82 Yes 27 83.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23626935 - NM_024675 PALB2 0 . . . 5.62 91.14 23 6.78 Yes 6 0.6 No 0 0 No -22 0.97 Yes 48 62.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59781076 - NM_032043 BRIP1 0 . . . 4.05 74.07 35 6.38 Yes 69 -5.19 No 0 0 No -34 0.95 Yes 47 36.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89625071 + NM_000314 PTEN 0 . . . 0.34 71.27 19 4.94 No 47 0.59 No 0 0 No -18 0.66 No 11 31.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68853953 + NM_133509 RAD51B 0 . . . 6.32 89.86 14 4.94 No 26 0.88 Yes 0 0 No -21 0.45 No 46 81.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131956693 + NM_005732 RAD50 0 . . . 4.98 73.45 20 6.32 Yes 60 0.43 No 0 0 No -19 0.72 Yes 47 50.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215606542 - NM_000465 BARD1 0 . . . 6.25 86.42 19 4.61 No 20 0.79 Yes 0 0 No -18 0.58 No 38 76.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47697573 + NM_000251 MSH2 0 . . . 2.36 71.21 18 4.9 No 16 1.17 Yes 0 0 No -21 0.67 Yes 42 93.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68981887 + NM_133509 RAD51B 0 . . . 7.75 76.14 29 5.48 No 1 2.34 Yes 0 0 No -28 0.83 Yes 53 53.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215621150 - NM_000465 BARD1 0 . . . 2.16 0 19 4.79 No 64 0.99 Yes 0 0 No -21 0.47 No 47 57.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68673353 + NM_133509 RAD51B 0 . . . 4.42 71.21 18 4.9 No 56 0.37 No 0 0 No -26 0.51 No 38 74.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104168501 - NM_001100119 XRCC3 0 . . . 0.36 0 35 6.08 Yes 17 0.89 Yes 0 0 No -34 0.33 No 51 21.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41008585 + NM_001164269 RAD51 0 . . . 10.87 87.82 19 4.47 No 34 0.76 No 0 0 No -18 0.78 Yes 34 72.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68963917 + NM_133509 RAD51B 0 . . . 8.46 89.21 25 5.54 No 39 -0.47 No 0 0 No -24 0.92 Yes 44 58.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94159179 - NM_005591 MRE11 0 . . . 3.89 89.27 12 4.24 No 49 0.59 No 0 0 No -31 0.93 Yes 46 80.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68292657 + NM_133509 RAD51B 0 . . . 3.31 81.12 18 4.89 No 27 -2.11 No 0 0 No -21 0.55 No 12 45.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29092293 - NM_001005735 CHEK2 0 . . . 4.55 75.62 16 4.49 No 49 0.47 No 0 0 No -27 0.83 Yes 50 82.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69010727 + NM_133509 RAD51B 0 . . . 1.89 67.63 38 5.95 Yes 52 -4.82 No 0 0 No -37 0.52 No 53 54.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89705442 + NM_000314 PTEN 0 . . . 2.32 77.71 31 4.58 No 72 -2.1 No 0 0 No -24 0.67 Yes 47 72.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68692769 + NM_133509 RAD51B 0 . . . 4.59 79.1 14 4.46 No 4 0.97 Yes 0 0 No -31 0.66 No 46 94.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41000610 + NM_001164269 RAD51 0 . . . 1.21 80.12 22 5.27 No 7 0.71 No 0 0 No -21 0.68 Yes 46 78.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90969052 - NM_002485 NBN 0 . . . 2.01 82.6 51 7.61 Yes 57 0.27 No 0 0 No -50 0.39 No 45 61.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41249825 - NM_007294 BRCA1 0 . . . 4.58 83.65 14 5.1 No 63 -5.39 No 0 0 No -47 0.61 No 47 86.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69099517 + NM_133509 RAD51B 0 . . . 2.72 0 39 6.67 Yes 17 1.05 Yes 0 0 No -33 0.4 No 41 86.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68287203 + NM_133509 RAD51B 0 . . . 3.18 89.95 20 3.8 No 41 1.04 Yes 0 0 No -20 0.78 Yes 17 78.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69128797 + NM_133509 RAD51B 0 . . . 5.89 76.16 34 6.08 Yes 66 1.4 Yes 0 0 No -33 0.6 No 40 78.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47632706 + NM_000251 MSH2 0 . . . 0.19 66.66 18 5.48 No 51 -4.33 No 0 0 No -50 0.83 Yes 54 46.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89713647 + NM_000314 PTEN 0 . . . 2.04 65.39 15 4.58 No 13 0.8 Yes 0 0 No -57 0.74 Yes 45 90.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68791176 + NM_004360 CDH1 0 . . . 2.24 80.12 12 4.68 No 7 1.16 Yes 0 0 No -42 0.46 No 51 82.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47694702 + NM_000251 MSH2 0 . . . 2.22 86.52 30 5.54 No 33 1.16 Yes 0 0 No -37 0.49 No 50 49.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68574801 + NM_133509 RAD51B 0 . . . 2.35 72.01 21 5.14 No 50 0.22 No 0 0 No -26 0.48 No 49 63.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108148079 + NM_000051 ATM 0 . . . 5.32 81.3 19 5.66 Yes 17 1.27 Yes 0 0 No -26 0.58 No 47 55.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68830001 + NM_133509 RAD51B 0 . . . 6.24 85.97 71 9.01 Yes 19 0.16 No 0 0 No -30 0.67 Yes 40 44.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68953703 + NM_133509 RAD51B 0 . . . 3.83 72.16 24 4.9 No 15 0.39 No 0 0 No -54 0.86 Yes 42 75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68504749 + NM_133509 RAD51B 0 . . . 4.3 75.82 22 5.67 Yes -1 0.98 Yes 0 0 No -21 0.45 No 51 63.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68309031 + NM_133509 RAD51B 0 . . . 2.22 0 22 5.29 No 44 0.77 Yes 0 0 No -21 0.41 No 45 56.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52435736 - NM_004656 BAP1 0 . . . 9.27 85.5 29 6.31 Yes -1 0.27 No 0 0 No -28 0.44 No 44 48.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69082956 + NM_133509 RAD51B 0 . . . 8.2 83.66 11 5.1 No 27 1.36 Yes 0 0 No -19 0.55 No 31 75.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69008120 + NM_133509 RAD51B 0 . . . 3.33 81.59 67 7.76 Yes 68 1.16 Yes 0 0 No -39 0.4 No 53 65.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68309116 + NM_133509 RAD51B 0 . . . 3.97 80 20 4.67 No 16 1.38 Yes 0 0 No -29 0.42 No 42 75.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89629003 + NM_000314 PTEN 0 . . . 4.74 84.41 19 5 No 20 0.54 No 0 0 No -46 0.86 Yes 38 66.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89693937 + NM_000314 PTEN 0 . . . 0.49 64.77 17 5.2 No 42 0.65 No 0 0 No -23 0.48 No 44 27.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152350040 - NM_005431 XRCC2 0 . . . 1.71 74.71 36 7.83 Yes 66 -3.65 No 0 0 No -35 0.52 No 52 37.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59756606 - NM_032043 BRIP1 0 . . . 1.29 76.27 17 5.38 No 14 0.79 Yes 0 0 No -19 0.33 No 53 50.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56800919 + NM_058216 RAD51C 0 . . . 2.4 81.72 21 5.73 Yes 6 1.4 Yes 0 0 No -26 0.82 Yes 52 88.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32928056 + NM_000059 BRCA2 0 . . . 1.37 0 27 5.14 No 72 0.1 No 0 0 No -48 0.6 No 45 76.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68773057 + NM_133509 RAD51B 0 . . . 9.3 88.14 37 6.56 Yes 34 1.36 Yes 0 0 No -42 0.45 No 46 73.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89639107 + NM_000314 PTEN 0 . . . 2.34 0 24 4.79 No 31 0.83 Yes 0 0 No -22 0.37 No 27 63.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215597851 - NM_000465 BARD1 0 . . . 3.59 69.7 17 4.12 No 1 0.98 Yes 0 0 No -38 0.41 No 51 88.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68908515 + NM_133509 RAD51B 0 . . . 3.09 73.69 42 5.6 Yes 59 0.74 No 0 0 No -29 0.33 No 46 56.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23630841 - NM_024675 PALB2 0 . . . 3.68 75.25 29 5.92 Yes 11 0.54 No 0 0 No -28 0.72 Yes 47 63.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68390453 + NM_133509 RAD51B 0 . . . 8.27 79.29 31 4.26 No 8 1.3 Yes 0 0 No -24 0.77 Yes 42 76.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47763190 + NM_000251 MSH2 0 . . . 1.32 64.63 20 4.21 No 57 0.25 No 0 0 No -23 0.89 Yes 35 49.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68784487 + NM_004360 CDH1 0 . . . 4.87 72.45 38 5.06 No 65 -5.85 No 0 0 No -31 0.49 No 49 71.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84386365 - NM_139076 FAM175A 0 . . . 3.45 73.68 18 3.95 No 10 1.83 Yes 0 0 No -23 0.42 No 42 84.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32920541 + NM_000059 BRCA2 0 . . . 4.26 75.16 12 4.24 No 34 1.01 Yes 0 0 No -30 0.84 Yes 42 85.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152354158 - NM_005431 XRCC2 0 . . . 4.64 85.86 9 3.87 No 3 1.23 Yes 0 0 No -29 0.77 Yes 44 50.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45796656 - NM_001048171 MUTYH 0 . . . 2.11 84.22 23 5.06 No 33 1.01 Yes 0 0 No -22 0.58 No 50 52.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90972026 - NM_002485 NBN 0 . . . 1.65 75.51 23 3.73 No 40 0.59 No 0 0 No -38 0.33 No 43 24.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68778956 + NM_133509 RAD51B 0 . . . 3.12 68.28 15 4.11 No 2 0.88 Yes 0 0 No -25 0.51 No 45 74.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69091577 + NM_133509 RAD51B 0 . . . 2.54 81.7 37 8 Yes 51 1.34 Yes 0 0 No -36 0.8 Yes 52 37.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215607953 - NM_000465 BARD1 0 . . . 4.29 70.24 19 4.9 No 72 -6.11 No 0 0 No -46 0.44 No 40 46.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108194769 + NM_000051 ATM 0 . . . 4.33 71.91 21 5.19 No 67 1.1 Yes 0 0 No -54 0.86 Yes 38 47.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215649338 - NM_000465 BARD1 0 . . . 2.33 62.9 30 5.4 No 73 -2.58 No 0 0 No -18 0.31 No 42 81.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56768914 + NM_058216 RAD51C 0 . . . 4.05 80.86 33 5.42 No 53 0.65 No 0 0 No -25 0.86 Yes 36 48.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47673297 + NM_000251 MSH2 0 . . . 1.33 74.34 28 5.39 No 3 0.97 Yes 0 0 No -27 0.75 Yes 50 39.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68676055 + NM_133509 RAD51B 0 . . . 0.57 71.22 24 5.92 Yes 8 1.07 Yes 0 0 No -26 0.54 No 50 94.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190670943 + NM_000534 PMS1 0 . . . 5.91 79.81 18 4.78 No 41 -3.1 No 0 0 No -21 0.51 No 52 47.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68745416 + NM_133509 RAD51B 0 . . . 2.71 61.52 14 3.87 No 30 0.52 No 0 0 No -24 0.77 Yes 30 92.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104183154 - NM_001100119 XRCC3 0 . . . 3.73 71.37 23 4.06 No 73 -5.34 No 0 0 No -11 0.29 No 48 53.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37064478 + NM_000249 MLH1 0 . . . 8.07 79.24 24 5.79 Yes 63 0.36 No 0 0 No -23 0.63 No 44 69.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131923848 + NM_005732 RAD50 0 . . . 0.83 65.32 42 5.39 No 16 0.31 No 0 0 No -34 0.58 No 39 75.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68656924 + NM_133509 RAD51B 0 . . . 0.65 0 19 4.9 No 58 -2.7 No 0 0 No -46 0.51 No 53 50.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68866553 + NM_133509 RAD51B 0 . . . 5.04 79.86 15 4.21 No 73 -4.75 No 0 0 No -20 0.9 Yes 41 34.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59904442 - NM_032043 BRIP1 0 . . . 4.69 69.24 23 4.9 No 9 0.78 Yes 0 0 No -20 0.81 Yes 49 85.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84388824 - NM_139076 FAM175A 0 . . . 5.88 73.07 23 5.35 No 41 0.39 No 0 0 No -22 0.52 No 36 66.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108147342 + NM_000051 ATM 0 . . . 2.34 0 33 5.99 Yes 31 1.69 Yes 0 0 No -28 0.3 No 32 69.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69131866 + NM_133509 RAD51B 0 . . . 7.27 76.05 16 5.47 No 47 1.43 Yes 0 0 No -24 0.62 No 46 45.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215665409 - NM_000465 BARD1 0 . . . 4.52 68.3 29 5.57 Yes 62 0.43 No 0 0 No -28 0.61 No 50 56.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23617180 - NM_024675 PALB2 0 . . . 4.07 72.11 23 3.48 No 11 0.51 No 0 0 No -27 0.49 No 47 96.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32974583 + NM_000059 BRCA2 0 . . . 4.03 71.19 20 4.44 No 34 0.97 Yes 0 0 No -23 0.59 No 48 59.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68631826 + NM_133509 RAD51B 0 . . . 1.32 61.24 9 3.87 No 28 0.23 No 0 0 No -29 0.33 No 54 75.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68611972 + NM_133509 RAD51B 0 . . . 6.77 79.1 25 5.39 No 38 2.15 Yes 0 0 No -24 0.85 Yes 48 73.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69034051 + NM_133509 RAD51B 0 . . . 8.13 84.68 53 5.44 No 43 0.43 No 0 0 No -39 0.66 No 35 30.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68399790 + NM_133509 RAD51B 0 . . . 5.79 68.62 10 5.55 No 38 0.69 No 0 0 No -24 0.35 No 46 63.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68815362 + NM_004360 CDH1 0 . . . 0.07 76.24 37 6.4 Yes 0 1.28 Yes 0 0 No -22 0.61 No 49 84.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23635511 - NM_024675 PALB2 0 . . . 4.7 86.97 28 5.29 No 38 0.25 No 0 0 No -27 0.81 Yes 49 69.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89688733 + NM_000314 PTEN 0 . . . 4.09 74.53 29 6.32 Yes 41 1.02 Yes 0 0 No -28 0.88 Yes 45 47.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68320831 + NM_133509 RAD51B 0 . . . 3.96 78.62 9 4.69 No 16 1.21 Yes 0 0 No -27 0.33 No 42 95.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68379084 + NM_133509 RAD51B 0 . . . 2.73 72.64 25 5.2 No 33 1.02 Yes 0 0 No -24 0.43 No 25 96.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32975298 + NM_000059 BRCA2 0 . . . 0.37 63.51 17 6.31 Yes 2 0.4 No 0 0 No -26 0.67 Yes 56 54.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69124215 + NM_133509 RAD51B 0 . . . 4.51 67.43 22 5.66 Yes 67 0.97 Yes 0 0 No -28 0.73 Yes 44 72.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94150632 - NM_005591 MRE11 0 . . . 2.43 73.07 14 5.2 No -1 0.34 No 0 0 No -17 0.34 No 38 62.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68753661 + NM_133509 RAD51B 0 . . . 0.61 77.4 37 6 Yes 40 1.09 Yes 0 0 No -36 0.62 No 46 72.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75496829 - NM_001040108 MLH3 0 . . . 2.98 73.19 15 4.93 No 3 1.49 Yes 0 0 No -25 0.39 No 21 74.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40990802 + NM_001164269 RAD51 0 . . . 2.86 75.17 50 7.07 Yes 10 0.29 No 0 0 No -35 0.4 No 43 44.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68399480 + NM_133509 RAD51B 0 . . . 5.19 81.97 34 7.59 Yes 49 0.73 No 0 0 No -33 0.65 No 49 92.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7571061 - NM_000546 TP53 0 . . . 8.01 85.29 25 4.98 No 13 0.32 No 0 0 No -24 0.72 Yes 45 87.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48015892 + NM_000179 MSH6 0 . . . 5.52 83.82 25 5.08 No 6 1.12 Yes 0 0 No -22 0.57 No 52 82.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94200632 - NM_005591 MRE11 0 . . . 8.82 80.83 28 8.52 Yes 59 1.29 Yes 0 0 No -27 0.84 Yes 48 76.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68784656 + NM_133509 RAD51B 0 . . . 3.73 79.41 20 4.16 No 61 -2.59 No 0 0 No -23 0.94 Yes 45 76.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75518778 - NM_001040108 MLH3 0 . . . 0.41 67.3 19 5 No 65 1.12 Yes 0 0 No -24 0.48 No 36 41.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47704291 + NM_000251 MSH2 0 . . . 1.84 0 29 4.95 No 72 0.35 No 0 0 No -28 0.65 No 27 66.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190741721 + NM_000534 PMS1 0 . . . 2.29 69.29 20 5.29 No 29 0.94 Yes 0 0 No -24 0.55 No 40 39.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59848660 - NM_032043 BRIP1 0 . . . 1.83 61.54 31 5.74 Yes -1 1.15 Yes 0 0 No -30 0.77 Yes 40 94.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84405757 - NM_139076 FAM175A 0 . . . 5.21 72.53 22 5.2 No 17 1.24 Yes 0 0 No -21 0.7 Yes 41 62.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59810750 - NM_032043 BRIP1 0 . . . 3.49 66.96 39 5.94 Yes 53 -5.05 No 0 0 No -25 0.8 Yes 37 52.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32973101 + NM_000059 BRCA2 0 . . . 4.91 88.34 53 7.99 Yes 51 0.72 No 0 0 No -52 0.8 Yes 49 85.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68681088 + NM_133509 RAD51B 0 . . . 5.27 77.68 12 4.8 No 5 0.75 No 0 0 No -23 0.52 No 53 93.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190698045 + NM_000534 PMS1 0 . . . 1.61 65.24 34 6.13 Yes 34 -3.84 No 0 0 No -33 0.6 No 39 42.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68560234 + NM_133509 RAD51B 0 . . . 2.66 74.24 35 6 Yes 26 -1.81 No 0 0 No -29 0.54 No 50 88.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59804365 - NM_032043 BRIP1 0 . . . 3.18 77.8 37 6.52 Yes 15 1.59 Yes 0 0 No -37 0.63 No 43 62.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47805179 + NM_000251 MSH2 0 . . . 2.22 0 19 4.46 No 63 0 No 0 0 No -23 0.63 No 47 25.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68832307 + NM_133509 RAD51B 0 . . . 4.12 75.79 31 5.63 Yes 5 0.47 No 0 0 No -30 0.67 Yes 47 72.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84389112 - NM_139076 FAM175A 0 . . . 3.76 77.91 22 3.93 No 0 0.42 No 0 0 No -21 0.78 Yes 14 38.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105181630 + NM_021930 RINT1 0 . . . 4.71 84.17 23 5.28 No 47 0.76 No 0 0 No -22 0.94 Yes 20 74.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90987805 - NM_002485 NBN 0 . . . 3.56 72.53 33 5.66 Yes 20 0.71 No 0 0 No -32 0.93 Yes 49 83.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131961743 + NM_005732 RAD50 0 . . . 3.6 85.02 24 5.91 Yes 4 1.2 Yes 0 0 No -23 0.63 No 45 58.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75496682 - NM_001040108 MLH3 0 . . . 0.02 83.92 29 5.79 Yes 15 1.5 Yes 0 0 No -28 0.81 Yes 43 95.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131924233 + NM_005732 RAD50 0 . . . 5.48 85.28 17 6.93 Yes 2 0.65 No 0 0 No -16 0.43 No 41 38.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68531936 + NM_133509 RAD51B 0 . . . 1.73 0 39 7.37 Yes 64 -2.63 No 0 0 No -38 0.9 Yes 48 51.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94165690 - NM_005591 MRE11 0 . . . 5.16 80.29 25 4.77 No 59 1.67 Yes 0 0 No -24 0.59 No 50 44.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56806553 + NM_058216 RAD51C 0 . . . 3.4 78.75 18 5.36 No 61 0.75 No 0 0 No -23 0.58 No 47 87.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41267418 - NM_007294 BRCA1 0 . . . 1.67 86.71 31 6 Yes 33 1.11 Yes 0 0 No -30 0.59 No 50 46.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68780145 + NM_133509 RAD51B 0 . . . 7.78 74.95 27 5.47 No 41 0 No 0 0 No -21 0.57 No 44 90.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68631481 + NM_133509 RAD51B 0 . . . 1.96 70.15 24 5.28 No 62 1 Yes 0 0 No -23 0.73 Yes 63 31.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68681228 + NM_133509 RAD51B 0 . . . 3.47 68.25 15 4 No 62 -3 No 0 0 No -27 0.59 No 51 39.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47730995 + NM_000251 MSH2 0 . . . 4.87 72.89 13 5.31 No 19 1.25 Yes 0 0 No -23 0.66 No 39 97.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105205059 + NM_021930 RINT1 0 . . . 4.39 83.05 17 4.8 No 46 0.86 Yes 0 0 No -21 0.62 No 48 71.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215661502 - NM_000465 BARD1 0 . . . 5.14 66.71 12 4.24 No 12 1.04 Yes 0 0 No -34 0.59 No 46 90.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32941002 + NM_000059 BRCA2 0 . . . 1.06 64.85 30 5.67 Yes 10 0.1 No 0 0 No -30 0.54 No 48 72.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68702392 + NM_133509 RAD51B 0 . . . 1.73 76.63 29 4.19 No 15 0.33 No 0 0 No -28 0.85 Yes 43 71.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32937262 + NM_000059 BRCA2 0 . . . 5.59 77.51 22 5.29 No 2 1.22 Yes 0 0 No -21 0.59 No 52 87.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69030620 + NM_133509 RAD51B 0 . . . 0.72 0 13 3.41 No -2 0.61 No 0 0 No -35 0.51 No 60 58.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68952793 + NM_133509 RAD51B 0 . . . 3.99 79.25 39 6.54 Yes 49 0.28 No 0 0 No -25 0.7 Yes 47 41.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47763007 + NM_000251 MSH2 0 . . . 1.88 78.93 24 5.28 No 0 0.87 Yes 0 0 No -23 0.77 Yes 46 70.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41234091 - NM_007294 BRCA1 0 . . . 1.56 78.28 15 4.65 No 32 -2.18 No 0 0 No -23 0.86 Yes 48 91.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68870965 + NM_133509 RAD51B 0 . . . 3.36 87.12 15 4.22 No 59 0.8 Yes 0 0 No -24 0.43 No 55 40.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68849606 + NM_004360 CDH1 0 . . . 1.11 72.51 15 4.58 No 53 0.45 No 0 0 No -47 0.44 No 42 32.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89717018 + NM_000314 PTEN 0 . . . 3.59 63.58 33 5.42 No 15 0.76 No 0 0 No -32 0.61 No 43 64.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68696757 + NM_133509 RAD51B 0 . . . 6.93 85.87 21 5.18 No 9 1.2 Yes 0 0 No -20 0.35 No 45 61.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68462831 + NM_133509 RAD51B 0 . . . 0.07 76.05 21 4.67 No 0 0.3 No 0 0 No -20 0.55 No 46 44.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59805484 - NM_032043 BRIP1 0 . . . 2.85 82.27 19 5 No 65 0.77 Yes 0 0 No -26 0.5 No 35 60.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215655875 - NM_000465 BARD1 0 . . . 2.67 60.02 34 8.34 Yes 21 0.51 No 0 0 No -24 0.64 No 37 86.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37058127 + NM_000249 MLH1 0 . . . 2.29 75.3 29 5.92 Yes 18 0.77 Yes 0 0 No -28 0.8 Yes 40 93.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41271863 - NM_007294 BRCA1 0 . . . 1.91 0 31 6.63 Yes 55 0.62 No 0 0 No -30 0.76 Yes 48 92.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59774270 - NM_032043 BRIP1 0 . . . 3.15 85.81 44 6.46 Yes 9 0.37 No 0 0 No -43 0.31 No 49 90.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68692009 + NM_133509 RAD51B 0 . . . 3.59 0 14 4.47 No 65 0.97 Yes 0 0 No -38 0.36 No 37 43.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47641531 + NM_000251 MSH2 0 . . . 2.27 75.46 34 7.58 Yes 31 1.45 Yes 0 0 No -33 0.66 No 42 86.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68931004 + NM_133509 RAD51B 0 . . . 5.71 83.8 29 4.42 No 62 0.6 No 0 0 No -24 0.8 Yes 45 94.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94198883 - NM_005591 MRE11 0 . . . 4.4 65.61 24 4.87 No 30 0.08 No 0 0 No -23 0.83 Yes 39 65.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68361880 + NM_133509 RAD51B 0 . . . 0.3 65.89 21 5.97 Yes 19 -2.69 No 0 0 No -20 0.6 No 45 86.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68854022 + NM_133509 RAD51B 0 . . . 6.62 83.97 13 5.1 No 30 0.68 No 0 0 No -28 0.81 Yes 48 81.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47708219 + NM_000251 MSH2 0 . . . 1.4 74.1 25 5.24 No 64 0.4 No 0 0 No -25 0.69 Yes 42 68.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68645558 + NM_133509 RAD51B 0 . . . 5.1 66.58 23 4.3 No 18 1.24 Yes 0 0 No -18 0.38 No 40 69.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68958630 + NM_133509 RAD51B 0 . . . 4.9 88.67 21 5.2 No 4 1.58 Yes 0 0 No -20 0.86 Yes 49 76.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69008075 + NM_133509 RAD51B 0 . . . 7.02 87.52 23 5 No 23 1.16 Yes 0 0 No -22 0.88 Yes 43 86.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89727317 + NM_000314 PTEN 0 . . . 5.43 72.61 73 8.25 Yes 34 1.86 Yes 0 0 No -27 0.81 Yes 44 73.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215671090 - NM_000465 BARD1 0 . . . 4.13 72.77 34 5.25 No 32 0.17 No 0 0 No -28 0.4 No 26 79.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68897057 + NM_133509 RAD51B 0 . . . 1.53 74.35 26 5.21 No 70 0.3 No 0 0 No -21 0.54 No 43 51.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68909259 + NM_133509 RAD51B 0 . . . 3.59 68.95 22 4.21 No 16 0.97 Yes 0 0 No -49 0.75 Yes 42 81.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45804665 - NM_001048171 MUTYH 0 . . . 1.6 76.75 30 5.45 No 76 -6.37 No 0 0 No -29 0.79 Yes 18 53.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41237564 - NM_007294 BRCA1 0 . . . 6.86 77.53 36 5.66 Yes 46 -3.89 No 0 0 No -25 0.63 No 51 54.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89641031 + NM_000314 PTEN 0 . . . 2.62 71.02 20 5.92 Yes 28 -3.65 No 0 0 No -19 0.35 No 53 53.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190679201 + NM_000534 PMS1 0 . . . 9.67 85.22 16 3.98 No 3 -0.79 No 0 0 No -27 0.81 Yes 45 52.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190678195 + NM_000534 PMS1 0 . . . 3.97 69.54 36 6.08 Yes 27 0.32 No 0 0 No -18 0.37 No 31 70.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152354196 - NM_005431 XRCC2 0 . . . 0.18 76.84 11 5 No 57 1.16 Yes 0 0 No -20 0.48 No 44 55.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68740048 + NM_133509 RAD51B 0 . . . 1.99 90.38 30 4.49 No 53 -1.4 No 0 0 No -33 0.36 No 51 39.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68777478 + NM_004360 CDH1 0 . . . 0.77 73.18 46 9.71 Yes 32 1.03 Yes 0 0 No -45 0.78 Yes 21 49.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215599687 - NM_000465 BARD1 0 . . . 3.37 80.13 23 4.65 No 12 1.64 Yes 0 0 No -22 0.59 No 46 80.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29133846 - NM_001005735 CHEK2 0 . . . 4.81 82.37 24 5.89 Yes 4 0.08 No 0 0 No -23 0.73 Yes 54 54.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1222823 + NM_000455 STK11 0 . . . 5.54 75.36 30 5.73 Yes 5 0.07 No 0 0 No -58 0.52 No 53 63.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37049817 + NM_000249 MLH1 0 . . . 2.24 80.12 24 3.63 No 7 1.16 Yes 0 0 No -23 0.9 Yes 51 65.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47744770 + NM_000251 MSH2 0 . . . 1.74 70.06 21 5.04 No 68 -1.05 No 0 0 No -20 0.72 Yes 40 45.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48013175 + NM_000179 MSH6 0 . . . 1.37 67.06 24 6.11 Yes 42 -3.56 No 0 0 No -23 0.97 Yes 40 28.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59874484 - NM_032043 BRIP1 0 . . . 0.99 0 15 4.58 No 9 1.35 Yes 0 0 No -35 0.38 No 49 58.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190696552 + NM_000534 PMS1 0 . . . 4.97 84.95 15 4.23 No 37 -1.81 No 0 0 No -34 0.21 No 44 70.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190652482 + NM_000534 PMS1 0 . . . 4.36 80.5 24 4.29 No 29 0.79 Yes 0 0 No -30 0.56 No 34 64.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32925139 + NM_000059 BRCA2 0 . . . 2.46 72.72 17 4.8 No 4 0.39 No 0 0 No -20 0.37 No 54 45.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68412249 + NM_133509 RAD51B 0 . . . 3.51 83.41 16 5.1 No 12 0.78 Yes 0 0 No -45 0.53 No 46 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152354548 - NM_005431 XRCC2 0 . . . 0.71 56.63 26 6.36 Yes 12 0.63 No 0 0 No -28 0.55 No 46 33.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68609142 + NM_133509 RAD51B 0 . . . 5.44 82.74 12 4.57 No 55 0.27 No 0 0 No -17 0.34 No 47 79.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131968837 + NM_005732 RAD50 0 . . . 1.18 86.84 42 6.85 Yes 54 0.49 No 0 0 No -31 0.41 No 15 13.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68524200 + NM_133509 RAD51B 0 . . . 0.29 0 15 3.48 No 13 0.52 No 0 0 No -21 0.57 No 32 35.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47696034 + NM_000251 MSH2 0 . . . 4.08 78.24 30 5.37 No 66 1.53 Yes 0 0 No -29 0.73 Yes 29 61.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190662571 + NM_000534 PMS1 0 . . . 0.45 0 24 4.9 No 18 1.28 Yes 0 0 No -52 0.89 Yes 40 63.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152346098 - NM_005431 XRCC2 0 . . . 3.79 79.47 20 4.9 No 42 1.15 Yes 0 0 No -19 0.73 Yes 16 58.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108192099 + NM_000051 ATM 0 . . . 4.11 80 24 4.86 No 22 0.73 No 0 0 No -23 0.74 Yes 36 88.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108128096 + NM_000051 ATM 0 . . . 6.98 82.15 24 4.18 No 13 0.76 No 0 0 No -29 0.59 No 45 48.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152374030 - NM_005431 XRCC2 0 . . . 3.78 52.91 27 5.74 Yes 72 -2.62 No 0 0 No -26 0.89 Yes 27 90.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45796150 - NM_001048171 MUTYH 0 . . . 10.05 88.32 19 5.43 No 23 0.24 No 0 0 No -23 0.67 Yes 43 45.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89711973 + NM_000314 PTEN 0 . . . 3.7 76.32 15 4.36 No 34 -2.49 No 0 0 No -39 0.66 No 45 49.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94159349 - NM_005591 MRE11 0 . . . 3.17 72.71 32 5.04 No 51 0.55 No 0 0 No -28 0.45 No 49 71.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94165945 - NM_005591 MRE11 0 . . . 6.95 89.36 13 4.88 No 66 0.6 No 0 0 No -19 0.67 Yes 44 58.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68615103 + NM_133509 RAD51B 0 . . . 1.12 79.13 15 4.86 No 44 -4.61 No 0 0 No -57 0.51 No 51 54.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47685716 + NM_000251 MSH2 0 . . . 2.86 84 18 4.7 No 2 1.5 Yes 0 0 No -39 0.39 No 50 52.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190673148 + NM_000534 PMS1 0 . . . 5.2 86.2 37 6.39 Yes 52 0.94 Yes 0 0 No -21 0.42 No 49 90.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68582733 + NM_133509 RAD51B 0 . . . 5.27 74.13 46 6.63 Yes 76 -5.04 No 0 0 No -20 0.77 Yes 48 57.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68661489 + NM_133509 RAD51B 0 . . . 2.5 75.62 15 5.46 No 74 0.22 No 0 0 No -24 0.48 No 52 46.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68800005 + NM_133509 RAD51B 0 . . . 4.14 73.12 31 5.24 No -4 0.63 No 0 0 No -30 0.53 No 42 26.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89632785 + NM_000314 PTEN 0 . . . 1.4 74.09 19 4.89 No 35 0.52 No 0 0 No -35 0.59 No 54 73.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68314920 + NM_133509 RAD51B 0 . . . 2.24 80.12 10 4 No 7 1.04 Yes 0 0 No -27 0.93 Yes 51 58.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7592010 - NM_000546 TP53 0 . . . 2.59 75.92 30 4.33 No 44 -4.63 No 0 0 No -29 0.53 No 50 53.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68549982 + NM_133509 RAD51B 0 . . . 6.18 79.28 27 5.2 No 59 -2.06 No 0 0 No -23 0.39 No 47 69.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68323966 + NM_133509 RAD51B 0 . . . 2.71 75.48 16 4.69 No 31 0.19 No 0 0 No -44 0.42 No 12 43.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69109712 + NM_133509 RAD51B 0 . . . 6.02 72.8 26 5.1 No 14 0.27 No 0 0 No -25 0.71 Yes 36 52.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89627165 + NM_000314 PTEN 0 . . . 4.3 84.68 9 4.57 No 12 0.38 No 0 0 No -19 0.78 Yes 46 97.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94183603 - NM_005591 MRE11 0 . . . 5.87 86.41 19 7.12 Yes 63 0.24 No 0 0 No -26 0.46 No 49 65.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68685867 + NM_133509 RAD51B 0 . . . 6.03 79.18 32 5.64 Yes 72 -6.54 No 0 0 No -31 0.85 Yes 43 93.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190725808 + NM_000534 PMS1 0 . . . 6.24 69.2 28 3.82 No 52 0.76 No 0 0 No -31 0.33 No 47 39.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108161934 + NM_000051 ATM 0 . . . 0.38 76.63 10 5.39 No 67 -4.95 No 0 0 No -36 0.58 No 49 91.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131920189 + NM_005732 RAD50 0 . . . 4.96 91.21 28 5.15 No 12 1.32 Yes 0 0 No -25 0.55 No 46 93.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215613215 - NM_000465 BARD1 0 . . . 1.12 65.78 21 5.17 No 11 1.37 Yes 0 0 No -20 0.79 Yes 17 89.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7580879 - NM_000546 TP53 0 . . . 4.44 69.7 19 5 No 72 -4.04 No 0 0 No -27 0.48 No 50 45.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48029288 + NM_000179 MSH6 0 . . . 2.26 67.16 34 7.07 Yes 14 0.58 No 0 0 No -34 0.27 No 40 51.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89657483 + NM_000314 PTEN 0 . . . 5.25 75.33 16 5.54 No 58 1.69 Yes 0 0 No -24 0.18 No 39 80.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131958229 + NM_005732 RAD50 0 . . . 6.61 81.43 32 6.63 Yes 63 1.13 Yes 0 0 No -30 0.41 No 46 88.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68739918 + NM_133509 RAD51B 0 . . . 3.19 81.65 25 4.95 No 13 0.54 No 0 0 No -24 0.56 No 45 85.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152344347 - NM_005431 XRCC2 0 . . . 1.63 61.19 21 6.2 Yes 72 -5.06 No 0 0 No -20 0.69 Yes 49 60.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215606126 - NM_000465 BARD1 0 . . . 6.34 78.17 30 6.71 Yes 2 2.24 Yes 0 0 No -29 0.81 Yes 43 38.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48008567 + NM_000179 MSH6 0 . . . 2.09 81.01 13 4.75 No 0 0.52 No 0 0 No -21 0.64 No 37 41.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69129184 + NM_133509 RAD51B 0 . . . 0.64 68.34 36 6.78 Yes 57 1.35 Yes 0 0 No -25 0.54 No 52 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69047998 + NM_133509 RAD51B 0 . . . 1.91 79.05 38 4.15 No 7 0.37 No 0 0 No -22 0.79 Yes 51 85.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69058884 + NM_133509 RAD51B 0 . . . 7.64 78.7 14 4.66 No 5 1.31 Yes 0 0 No -24 0.57 No 45 26.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21981215 - NM_000077 CDKN2A 0 . . . 7.82 87.98 13 4.36 No 70 0.77 No 0 0 No -49 0.71 Yes 49 61.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68858019 + NM_004360 CDH1 0 . . . 1.17 83.16 20 4.54 No 33 1.14 Yes 0 0 No -26 0.56 No 25 37.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94161677 - NM_005591 MRE11 0 . . . 8.82 92.52 20 4.69 No 57 1.05 Yes 0 0 No -42 0.76 Yes 43 70.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69072355 + NM_133509 RAD51B 0 . . . 7.99 81.93 22 4.8 No NA NA NA 0 0 No -21 0.87 Yes 42 86.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41015579 + NM_001164269 RAD51 0 . . . 0.46 67.66 36 5.74 Yes 48 0.13 No 0 0 No -35 0.95 Yes 50 17.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108239496 + NM_000051 ATM 0 . . . 2.3 69.23 39 6.67 Yes 32 0.2 No 0 0 No -38 0.27 No 28 73.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68499436 + NM_133509 RAD51B 0 . . . 3.71 71.25 22 5.2 No 45 0.8 Yes 0 0 No -20 0.63 No 13 58.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108237410 + NM_000051 ATM 0 . . . 0.33 0 37 7.12 Yes 25 0.36 No 0 0 No -36 0.49 No 27 65.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68441228 + NM_133509 RAD51B 0 . . . 2.61 67.05 15 5.66 Yes 52 0.53 No 0 0 No -23 0.51 No 53 52.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68618789 + NM_133509 RAD51B 0 . . . 2.84 81.44 30 6.39 Yes 51 1.23 Yes 0 0 No -29 0.87 Yes 50 45.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37068845 + NM_000249 MLH1 0 . . . 0.92 76.63 40 6.52 Yes 75 -4.78 No 0 0 No -29 0.71 Yes 47 48.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68736231 + NM_133509 RAD51B 0 . . . 2.19 72.04 15 4.58 No 76 0.6 No 0 0 No -23 0.73 Yes 50 41.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90989192 - NM_002485 NBN 0 . . . 2.81 0 17 5.66 Yes 43 0.83 Yes 0 0 No -27 0.6 No 40 49.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215647796 - NM_000465 BARD1 0 . . . 1.08 80.39 30 5.7 Yes 58 1.9 Yes 0 0 No -30 0.62 No 44 89.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68972805 + NM_133509 RAD51B 0 . . . 2.15 77.18 24 6.4 Yes 39 0.16 No 0 0 No -23 0.67 Yes 26 59.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68809629 + NM_133509 RAD51B 0 . . . 4.21 75.96 15 5.19 No 75 0.06 No 0 0 No -44 0.38 No 19 70.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29132575 - NM_001005735 CHEK2 0 . . . 5.06 77.66 22 3.98 No 44 1.86 Yes 0 0 No -44 0.31 No 48 45.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32961201 + NM_000059 BRCA2 0 . . . 5.22 77.61 23 3.57 No 13 1.82 Yes 0 0 No -22 0.51 No 45 96.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68900683 + NM_133509 RAD51B 0 . . . 8.53 93.97 26 5.74 Yes 57 -1.13 No 0 0 No -30 0.77 Yes 35 58.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105177672 + NM_021930 RINT1 0 . . . 6.14 88.68 21 5.08 No 9 1.13 Yes 0 0 No -20 0.72 Yes 49 94.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7584920 - NM_000546 TP53 0 . . . 0.32 74.68 35 5.73 Yes 65 0.65 No 0 0 No -34 0.69 Yes 54 73.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68387171 + NM_133509 RAD51B 0 . . . 0.6 77.51 16 4.81 No 68 0.72 No 0 0 No -20 0.59 No 50 28.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75497800 - NM_001040108 MLH3 0 . . . 3.22 70.57 33 6.63 Yes 52 0.93 Yes 0 0 No -32 0.75 Yes 50 53.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68484342 + NM_133509 RAD51B 0 . . . 2.76 0 11 5.32 No 29 1.09 Yes 0 0 No -22 0.73 Yes 56 59.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45796854 - NM_001048171 MUTYH 0 . . . 0.24 59.42 17 4.79 No 36 0.56 No 0 0 No -20 0.91 Yes 22 32.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131914337 + NM_005732 RAD50 0 . . . 2.22 86.31 15 4.36 No 17 0.71 No 0 0 No -17 0.38 No 50 54.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68437850 + NM_133509 RAD51B 0 . . . 2.91 78.8 27 5.29 No 3 0.78 Yes 0 0 No -22 0.47 No 42 67.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37071756 + NM_000249 MLH1 0 . . . 2.81 75.66 21 4 No 2 1.19 Yes 0 0 No -20 0.88 Yes 48 59.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68589239 + NM_133509 RAD51B 0 . . . 2.8 75.33 19 5 No 21 -2.89 No 0 0 No -18 0.59 No 48 49.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68524248 + NM_133509 RAD51B 0 . . . 2.2 62.9 24 4.53 No 61 0.5 No 0 0 No -36 0.79 Yes 52 46.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68861116 + NM_004360 CDH1 0 . . . 1.92 75.83 46 8.42 Yes 29 -2.05 No 0 0 No -20 0.55 No 47 61.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47728415 + NM_000251 MSH2 0 . . . 6.3 83.48 26 5.66 Yes 7 1.23 Yes 0 0 No -25 0.49 No 51 77.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41225463 - NM_007294 BRCA1 0 . . . 0.74 0 30 4.59 No 70 -4.67 No 0 0 No -22 0.86 Yes 54 71.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52434558 - NM_004656 BAP1 0 . . . 1.17 0 12 4.01 No 4 1.66 Yes 0 0 No -23 0.83 Yes 54 68.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104167911 - NM_001100119 XRCC3 0 . . . 3.36 69 29 6.24 Yes 76 1.67 Yes 0 0 No -29 0.82 Yes 51 49.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59827418 - NM_032043 BRIP1 0 . . . 3.69 68.03 22 5.66 Yes 55 0.58 No 0 0 No -25 0.87 Yes 44 82.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68469622 + NM_133509 RAD51B 0 . . . 7.37 83.99 25 5.29 No 66 -1.94 No 0 0 No -24 0.68 Yes 41 77.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68595978 + NM_133509 RAD51B 0 . . . 0.41 0 29 6 Yes 69 0.54 No 0 0 No -28 0.73 Yes 43 89.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152351892 - NM_005431 XRCC2 0 . . . 2.33 65.53 29 5.28 No 38 0.67 No 0 0 No -24 0.29 No 14 46.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47665078 + NM_000251 MSH2 0 . . . 3.49 71.62 24 3.61 No 18 0.57 No 0 0 No -24 0.7 Yes 40 82.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68686530 + NM_133509 RAD51B 0 . . . 0.99 75.4 15 4.12 No 20 -3.08 No 0 0 No -14 0.47 No 55 27.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68472678 + NM_133509 RAD51B 0 . . . 5.6 77.45 15 5.71 Yes 74 -3.95 No 0 0 No -31 0.38 No 51 46.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1204606 + NM_000455 STK11 0 . . . 0.99 0 20 6.06 Yes 21 1.1 Yes 0 0 No -22 0.36 No 41 73.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68543225 + NM_133509 RAD51B 0 . . . 0.21 70.18 19 6.84 Yes 64 0.17 No 0 0 No -25 0.67 Yes 51 49.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40989400 + NM_001164269 RAD51 0 . . . 3.06 66.46 14 4.91 No 16 1.41 Yes 0 0 No -53 0.51 No 42 93.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84393425 - NM_139076 FAM175A 0 . . . 5.74 90.92 14 4.37 No 62 0.82 Yes 0 0 No -17 0.76 Yes 51 66.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59913420 - NM_032043 BRIP1 0 . . . 1.41 61.14 28 5.38 No 30 1.04 Yes 0 0 No -27 0.59 No 49 62.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32936704 + NM_000059 BRCA2 0 . . . 0.11 0 17 4.05 No 56 0.69 No 0 0 No -19 0.9 Yes 51 59.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68579488 + NM_133509 RAD51B 0 . . . 0.13 63.6 29 6.62 Yes 39 0.62 No 0 0 No -28 0.56 No 49 72.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108133859 + NM_000051 ATM 0 . . . 1.28 74.72 38 6.16 Yes 75 1 Yes 0 0 No -37 0.5 No 53 27.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108103291 + NM_000051 ATM 0 . . . 3.01 0 28 6.24 Yes 35 1.63 Yes 0 0 No -27 0.66 No 23 80.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215645839 - NM_000465 BARD1 0 . . . 3.45 0 25 5.1 No 41 0.18 No 0 0 No -24 0.88 Yes 40 81.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59885303 - NM_032043 BRIP1 0 . . . 2.17 72.15 38 6.4 Yes 41 0.43 No 0 0 No -37 0.55 No 39 39.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56810654 + NM_058216 RAD51C 0 . . . 0.39 85.89 10 5.14 No 37 1.61 Yes 0 0 No -26 0.84 Yes 44 96.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94222102 - NM_005591 MRE11 0 . . . 11.78 91.42 25 5.69 Yes 37 0.05 No 0 0 No -24 0.46 No 51 37.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59761115 - NM_032043 BRIP1 0 . . . 0.04 65.63 34 7.94 Yes 12 1.12 Yes 0 0 No -33 0.47 No 46 57.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108101224 + NM_000051 ATM 0 . . . 8.05 79.74 9 3.87 No 39 0.48 No 0 0 No -26 0.86 Yes 43 72.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190680809 + NM_000534 PMS1 0 . . . 4.73 84.22 10 4 No 5 1.25 Yes 0 0 No -32 0.35 No 53 62.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152358105 - NM_005431 XRCC2 0 . . . 4.55 70.68 16 5.29 No 55 0.84 Yes 0 0 No -21 0.49 No 49 82.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23633978 - NM_024675 PALB2 0 . . . 1.36 70.87 36 5.88 Yes 67 0.18 No 0 0 No -26 0.87 Yes 54 87.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37046567 + NM_000249 MLH1 0 . . . 0.17 66.98 41 6.48 Yes 69 0.42 No 0 0 No -38 0.52 No 60 38.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7563810 - NM_000546 TP53 0 . . . 0.87 80.37 25 5.06 No 38 0.74 No 0 0 No -24 0.91 Yes 40 75.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68614245 + NM_133509 RAD51B 0 . . . 5.32 84.08 24 5.8 Yes 6 1.47 Yes 0 0 No -23 0.6 No 44 64.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68295035 + NM_133509 RAD51B 0 . . . 6.07 74.18 17 5.17 No 64 1.01 Yes 0 0 No -20 0.67 Yes 46 53.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68492429 + NM_133509 RAD51B 0 . . . 4.08 72.59 25 5.11 No 16 0.55 No 0 0 No -25 0.53 No 42 84.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59932411 - NM_032043 BRIP1 0 . . . 5.31 79.56 16 4.63 No 50 1.67 Yes 0 0 No -28 0.3 No 45 81.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131952089 + NM_005732 RAD50 0 . . . 0.84 66.44 20 5.93 Yes 17 0.43 No 0 0 No -23 0.6 No 50 81.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1218744 + NM_000455 STK11 0 . . . 6.26 88.88 32 5.74 Yes 42 1.45 Yes 0 0 No -28 0.35 No 52 86.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68670426 + NM_133509 RAD51B 0 . . . 2.68 70.04 14 6.2 Yes 75 1.41 Yes 0 0 No -19 0.6 No 50 86.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41201841 - NM_007294 BRCA1 0 . . . 3.12 70.84 14 5.09 No 63 -4.93 No 0 0 No -25 0.45 No 51 47.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40987246 + NM_001164269 RAD51 0 . . . 3.39 74.54 50 7.32 Yes 64 0.49 No 0 0 No -31 0.65 No 59 28.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75495752 - NM_001040108 MLH3 0 . . . 0.93 84.22 34 5.81 Yes 33 0.97 Yes 0 0 No -22 0.66 No 50 28.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68685300 + NM_133509 RAD51B 0 . . . 2.38 74.48 19 5 No 65 1.55 Yes 0 0 No -18 0.75 Yes 51 67.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68301132 + NM_133509 RAD51B 0 . . . 0.8 76.35 21 3.58 No 62 -3.96 No 0 0 No -25 0.85 Yes 35 71.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68390061 + NM_133509 RAD51B 0 . . . 5.41 90.92 25 6.48 Yes 3 0.8 Yes 0 0 No -27 0.85 Yes 43 17.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29081917 - NM_001005735 CHEK2 0 . . . 3.87 79.28 37 7.07 Yes 58 1.02 Yes 0 0 No -36 0.64 No 43 48.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68846227 + NM_004360 CDH1 0 . . . 1.13 59.88 19 5 No 75 1.06 Yes 0 0 No -38 0.45 No 39 40.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68819943 + NM_004360 CDH1 0 . . . 2.81 69.8 17 4.71 No 41 -1.55 No 0 0 No -19 0.55 No 40 64.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68708575 + NM_133509 RAD51B 0 . . . 3.44 77.37 24 4.69 No 18 1.36 Yes 0 0 No -40 0.56 No 36 70.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68607843 + NM_133509 RAD51B 0 . . . 1.11 72.24 17 4.05 No 36 0.91 Yes 0 0 No -25 0.85 Yes 46 80.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68339706 + NM_133509 RAD51B 0 . . . 0.75 57.92 23 5.2 No 54 -4.41 No 0 0 No -22 0.59 No 45 25.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89636428 + NM_000314 PTEN 0 . . . 9.57 82.68 16 4.69 No 24 0.4 No 0 0 No -50 0.43 No 43 56.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68900992 + NM_133509 RAD51B 0 . . . 2.72 71.84 16 5.36 No 74 -1.58 No 0 0 No -11 0.33 No 50 57.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68733937 + NM_133509 RAD51B 0 . . . 0.03 79.77 15 5.55 No NA NA NA 0 0 No -45 0.27 No 45 31.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75506510 - NM_001040108 MLH3 0 . . . 4.81 70.13 42 6.63 Yes 22 0.91 Yes 0 0 No -41 0.46 No 36 84.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69018069 + NM_133509 RAD51B 0 . . . 5.94 85.99 52 7.14 Yes 33 0.69 No 0 0 No -51 0.47 No 46 75.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131939155 + NM_005732 RAD50 0 . . . 3.68 0 45 5.08 No 67 -4.61 No 0 0 No -28 0.44 No 56 25.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32925104 + NM_000059 BRCA2 0 . . . 0.7 0 27 5.48 No 10 0.32 No 0 0 No -26 0.59 No 45 55.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89680086 + NM_000314 PTEN 0 . . . 1.73 67.5 43 6.96 Yes 40 1.17 Yes 0 0 No -23 0.67 Yes 40 59.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48008956 + NM_000179 MSH6 0 . . . 11.82 87.11 23 5.39 No 23 0.48 No 0 0 No -22 0.88 Yes 35 78.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190668608 + NM_000534 PMS1 0 . . . 0.83 59.34 9 3.87 No 49 0.36 No 0 0 No -52 0.79 Yes 40 59.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47707623 + NM_000251 MSH2 0 . . . 4.31 79.04 15 5.74 Yes 34 1.13 Yes 0 0 No -26 0.67 Yes 24 75.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131936871 + NM_005732 RAD50 0 . . . 5.79 85.02 11 4.8 No 5 1.08 Yes 0 0 No -34 0.55 No 39 51.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152371879 - NM_005431 XRCC2 0 . . . 1.08 67.03 21 5.74 Yes 52 0.75 No 0 0 No -20 0.84 Yes 55 27.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48028552 + NM_000179 MSH6 0 . . . 3.97 84.95 19 5 No 42 0.52 No 0 0 No -18 0.63 No 16 93.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108222867 + NM_000051 ATM 0 . . . 1.02 69.97 28 5.74 Yes 64 -6.13 No 0 0 No -28 0.78 Yes 49 52.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68618287 + NM_133509 RAD51B 0 . . . 7.24 76.36 17 4.8 No 6 1.32 Yes 0 0 No -16 0.33 No 52 66.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68841295 + NM_133509 RAD51B 0 . . . 6.8 78.47 21 5.2 No -2 0.86 Yes 0 0 No -25 0.47 No 44 40.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68640499 + NM_133509 RAD51B 0 . . . 1.19 75.59 16 4.69 No 62 -0.8 No 0 0 No -26 0.58 No 49 90.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68867943 + NM_133509 RAD51B 0 . . . 8.3 92.75 28 7.21 Yes 10 0.59 No 0 0 No -27 0.82 Yes 48 77.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23648566 - NM_024675 PALB2 0 . . . 0.9 83.95 28 5.45 No -4 -1.77 No 0 0 No -28 0.87 Yes 35 43.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47757375 + NM_000251 MSH2 0 . . . 0.2 65.27 16 4.47 No 46 -2.33 No 0 0 No -43 0.81 Yes 51 17.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68767434 + NM_133509 RAD51B 0 . . . 7.45 91.22 50 8.31 Yes 61 0.98 Yes 0 0 No -49 0.96 Yes 49 40.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59858159 - NM_032043 BRIP1 0 . . . 6.05 84.42 28 5.56 No 14 0.18 No 0 0 No -27 0.33 No 36 53.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56778359 + NM_058216 RAD51C 0 . . . 6.34 80.64 20 4.2 No 59 1.24 Yes 0 0 No -27 0.86 Yes 42 79.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47657865 + NM_000251 MSH2 0 . . . 3.38 0 38 5.51 No 70 -1.07 No 0 0 No -41 0.83 Yes 32 62.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215658083 - NM_000465 BARD1 0 . . . 3.8 73.44 37 7.07 Yes 45 1.22 Yes 0 0 No -31 0.63 No 50 73.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41264198 - NM_007294 BRCA1 0 . . . 0.27 83.65 19 4.4 No 62 -5.15 No 0 0 No -19 0.82 Yes 45 64.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68419789 + NM_133509 RAD51B 0 . . . 8.19 86.39 17 4.8 No 71 0.47 No 0 0 No -40 0.89 Yes 44 54.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68892357 + NM_133509 RAD51B 0 . . . 1.74 66.31 19 5 No 68 1.31 Yes 0 0 No -21 0.46 No 42 52.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68913721 + NM_133509 RAD51B 0 . . . 2.11 74.01 21 5.99 Yes 18 -3.83 No 0 0 No -24 0.58 No 12 29.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47789952 + NM_000251 MSH2 0 . . . 0.22 0 19 4.46 No 18 1.49 Yes 0 0 No -18 0.62 No 40 90.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29083449 - NM_001005735 CHEK2 0 . . . 6.95 85.91 29 5.92 Yes 58 0.64 No 0 0 No -26 0.61 No 44 75.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68487308 + NM_133509 RAD51B 0 . . . 5.01 81.52 17 5.39 No 13 1.11 Yes 0 0 No -16 0.4 No 45 86.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84405574 - NM_139076 FAM175A 0 . . . 3.85 74.84 12 4.69 No 3 0.23 No 0 0 No -49 0.72 Yes 42 61.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68836430 + NM_133509 RAD51B 0 . . . 2.25 76.71 20 7.14 Yes 59 0.65 No 0 0 No -19 0.74 Yes 46 94.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68502671 + NM_133509 RAD51B 0 . . . 2.58 69.01 22 4.96 No 62 -4.58 No 0 0 No -26 0.57 No 43 74.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108118584 + NM_000051 ATM 0 . . . 4.66 71.57 31 6.86 Yes 21 1.61 Yes 0 0 No -30 0.8 Yes 37 90.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68474026 + NM_133509 RAD51B 0 . . . 5.93 74.38 50 7.02 Yes 20 0.91 Yes 0 0 No -33 0.45 No 42 64.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68370554 + NM_133509 RAD51B 0 . . . 5.96 79.23 23 5.81 Yes 27 -2.84 No 0 0 No -27 0.77 Yes 46 57.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37049038 + NM_000249 MLH1 0 . . . 4.05 70.88 32 4.58 No 58 -4.84 No 0 0 No -31 0.92 Yes 50 64.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89724260 + NM_000314 PTEN 0 . . . 0.89 68.67 27 5.2 No 46 -3.23 No 0 0 No -26 0.66 No 50 44.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108104990 + NM_000051 ATM 0 . . . 6.57 81.14 22 4.8 No 74 -4.65 No 0 0 No -22 0.81 Yes 48 74.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1211772 + NM_000455 STK11 0 . . . 4.24 71.4 29 5.7 Yes 60 -1.97 No 0 0 No -28 0.91 Yes 50 64.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69061357 + NM_133509 RAD51B 0 . . . 1.95 72.42 15 5.23 No 34 1.06 Yes 0 0 No -20 0.69 Yes 24 81.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59853899 - NM_032043 BRIP1 0 . . . 0.56 74.19 16 4.87 No 66 1.25 Yes 0 0 No -20 0.75 Yes 22 84.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41260022 - NM_007294 BRCA1 0 . . . 6.08 84.58 26 4.21 No 40 1.67 Yes 0 0 No -25 0.8 Yes 38 86.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215638043 - NM_000465 BARD1 0 . . . 1.09 68.53 31 5.26 No 70 0.32 No 0 0 No -26 0.9 Yes 60 54.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41013684 + NM_001164269 RAD51 0 . . . 4.65 78.08 60 8.38 Yes 6 0.67 No 0 0 No -26 0.78 Yes 46 71.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68387510 + NM_133509 RAD51B 0 . . . 0.71 0 28 4.39 No 3 1.21 Yes 0 0 No -27 0.88 Yes 44 30.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41000237 + NM_001164269 RAD51 0 . . . 4.74 84.41 16 4.44 No 73 1.53 Yes 0 0 No -40 0.81 Yes 42 89.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68799352 + NM_004360 CDH1 0 . . . 2.44 68.34 15 5.38 No 21 1.71 Yes 0 0 No -24 0.88 Yes 42 78.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68376733 + NM_133509 RAD51B 0 . . . 4.29 81.43 18 4.22 No 15 0.96 Yes 0 0 No -28 0.53 No 40 74.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59847038 - NM_032043 BRIP1 0 . . . 1.1 73.54 22 5.7 Yes 32 1.52 Yes 0 0 No -21 0.63 No 49 42.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108201217 + NM_000051 ATM 0 . . . 1.15 82.5 52 9.25 Yes 44 0.73 No 0 0 No -36 0.5 No 47 70.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68460589 + NM_133509 RAD51B 0 . . . 2.05 73.04 38 6.63 Yes 70 0.6 No 0 0 No -37 0.39 No 30 60.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68470508 + NM_133509 RAD51B 0 . . . 5.94 84.02 101 9.49 Yes 43 0.44 No 0 0 No -44 0.77 Yes 52 61.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59792828 - NM_032043 BRIP1 0 . . . 1.96 65.15 21 4.75 No 5 -2.17 No 0 0 No -29 0.34 No 33 64.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47780829 + NM_000251 MSH2 0 . . . 2.84 70.88 15 5.25 No 43 0.36 No 0 0 No -22 0.58 No 44 83.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68499742 + NM_133509 RAD51B 0 . . . 2.28 0 21 5.44 No 5 1.53 Yes 0 0 No -28 0.38 No 28 66.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59893208 - NM_032043 BRIP1 0 . . . 6.47 77.14 11 5 No 62 0.14 No 0 0 No -43 0.64 No 45 64.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68716788 + NM_133509 RAD51B 0 . . . 2.75 75.06 20 4.5 No 71 -2.74 No 0 0 No -32 0.79 Yes 49 87.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105172930 + NM_021930 RINT1 0 . . . 3.44 71.93 11 4.12 No 9 0.11 No 0 0 No -30 0.93 Yes 49 51.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47664853 + NM_000251 MSH2 0 . . . 3.1 0 28 5.83 Yes 19 0.18 No 0 0 No -27 0.76 Yes 39 95.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69025887 + NM_133509 RAD51B 0 . . . 5.49 74.95 12 4 No 72 -3.19 No 0 0 No -31 0.76 Yes 34 45.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68348188 + NM_133509 RAD51B 0 . . . 7.87 83.16 38 5.43 No 73 1.43 Yes 0 0 No -27 0.74 Yes 52 89.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59916777 - NM_032043 BRIP1 0 . . . 8.36 77.38 19 4.8 No 62 1.45 Yes 0 0 No -18 0.61 No 43 57.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69041498 + NM_133509 RAD51B 0 . . . 4.24 77.07 16 5.07 No 38 0.83 Yes 0 0 No -19 0.63 No 45 81.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69099293 + NM_133509 RAD51B 0 . . . 3.73 81.24 26 5.65 Yes 73 -4.44 No 0 0 No -25 0.81 Yes 46 85.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68355700 + NM_133509 RAD51B 0 . . . 5.42 80.31 27 6.15 Yes 21 0.61 No 0 0 No -26 0.85 Yes 37 89.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190720500 + NM_000534 PMS1 0 . . . 5.43 66.34 19 5.65 Yes 30 0.47 No 0 0 No -34 0.53 No 43 57.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23650974 - NM_024675 PALB2 0 . . . 2.24 80.12 21 4.91 No 7 1.16 Yes 0 0 No -20 0.69 Yes 51 66.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37034106 + NM_000249 MLH1 0 . . . 4.52 80.25 22 5.29 No 41 0.03 No 0 0 No -21 0.66 No 48 38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94196268 - NM_005591 MRE11 0 . . . 5.56 79.54 16 6.32 Yes 3 1.22 Yes 0 0 No -33 0.77 Yes 46 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47759571 + NM_000251 MSH2 0 . . . 0.43 65.97 25 5.27 No 54 0.05 No 0 0 No -20 0.62 No 49 59.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6008738 - NM_000535 PMS2 0 . . . 2.16 82.33 78 8.35 Yes 4 1.42 Yes 0 0 No -24 0.79 Yes 54 86.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29122256 - NM_001005735 CHEK2 0 . . . 3.95 85.48 24 4.74 No 3 0.92 Yes 0 0 No -23 0.94 Yes 50 86.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32930391 + NM_000059 BRCA2 0 . . . 4.64 86.37 24 4.8 No 61 -1.02 No 0 0 No -26 0.4 No 40 53.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41269290 - NM_007294 BRCA1 0 . . . 2.3 0 27 6.1 Yes 9 1.18 Yes 0 0 No -26 0.56 No 49 85.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108100221 + NM_000051 ATM 0 . . . 7.8 82.53 19 6.08 Yes 8 0.6 No 0 0 No -30 0.63 No 42 62.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68467214 + NM_133509 RAD51B 0 . . . 7.82 82.06 22 5.66 Yes 15 0.96 Yes 0 0 No -25 0.83 Yes 43 81.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190657125 + NM_000534 PMS1 0 . . . 2.68 69.23 38 6.21 Yes 22 0.33 No 0 0 No -32 0.67 Yes 36 51.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48006795 + NM_000179 MSH6 0 . . . 3.86 70.76 26 5.69 Yes 13 1.49 Yes 0 0 No -24 0.35 No 45 75.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47674971 + NM_000251 MSH2 0 . . . 4.14 84.67 16 4.25 No 15 -0.02 No 0 0 No -30 0.34 No 10 14.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41018155 + NM_001164269 RAD51 0 . . . 4.29 79.52 19 6 Yes 58 -3.88 No 0 0 No -36 0.5 No 43 55.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32945951 + NM_000059 BRCA2 0 . . . 6.33 91.51 52 6.68 Yes 11 0.04 No 0 0 No -41 0.68 Yes 47 79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69069471 + NM_133509 RAD51B 0 . . . 3.31 69.23 58 6.31 Yes 69 0.55 No 0 0 No -26 0.59 No 45 74.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68636559 + NM_133509 RAD51B 0 . . . 6.94 87.64 15 5.57 Yes 9 1.19 Yes 0 0 No -31 0.32 No 46 55.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190682154 + NM_000534 PMS1 0 . . . 3.5 73.1 16 5.05 No 2 1.01 Yes 0 0 No -45 0.63 No 49 78.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68519463 + NM_133509 RAD51B 0 . . . 1.36 0 47 8.36 Yes 40 0.96 Yes 0 0 No -26 0.43 No 18 54.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68479649 + NM_133509 RAD51B 0 . . . 0.61 59.42 20 5.83 Yes 37 0.56 No 0 0 No -25 0.3 No 42 53.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190664902 + NM_000534 PMS1 0 . . . 5.68 83.21 38 6.3 Yes -2 0.78 Yes 0 0 No -21 0.51 No 48 55.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69092512 + NM_133509 RAD51B 0 . . . 2.43 69.54 13 4.36 No 24 0.28 No 0 0 No -30 0.36 No 34 95.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32912575 + NM_000059 BRCA2 0 . . . 4.09 79.19 17 5.32 No 38 0.51 No 0 0 No -24 0.63 No 45 32.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59897233 - NM_032043 BRIP1 0 . . . 1.5 70.19 26 5.64 Yes 33 0.77 No 0 0 No -26 0.69 Yes 45 73.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59887229 - NM_032043 BRIP1 0 . . . 1.69 62.06 42 6.47 Yes 36 0.45 No 0 0 No -27 0.41 No 34 60.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47777640 + NM_000251 MSH2 0 . . . 1.41 84.22 50 6.15 Yes 3 0.7 No 0 0 No -21 0.65 No 50 66.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6023006 - NM_000535 PMS2 0 . . . 0.09 74.68 19 7.23 Yes 50 0.76 No 0 0 No -25 0.27 No 54 80.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68806530 + NM_133509 RAD51B 0 . . . 1.84 72.51 19 4.41 No 72 1.33 Yes 0 0 No -27 0.63 No 40 21.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32935057 + NM_000059 BRCA2 0 . . . 0.51 72.01 40 7.33 Yes 64 -4.98 No 0 0 No -32 0.39 No 36 41.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94156531 - NM_005591 MRE11 0 . . . 5.23 75.63 25 4.93 No 64 -2.19 No 0 0 No -24 0.95 Yes 28 70.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59816630 - NM_032043 BRIP1 0 . . . 5.51 72.09 23 5.7 Yes 24 0.85 Yes 0 0 No -26 0.87 Yes 40 37.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59832867 - NM_032043 BRIP1 0 . . . 0.97 70.33 27 5.06 No 28 1.44 Yes 0 0 No -26 0.59 No 18 27.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41005923 + NM_001164269 RAD51 0 . . . 4.82 87 17 5.71 Yes 33 1.24 Yes 0 0 No -36 0.44 No 50 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75479874 - NM_001040108 MLH3 0 . . . 1.66 0 21 5.56 Yes 9 0.71 No 0 0 No -20 0.59 No 49 83.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89624580 + NM_000314 PTEN 0 . . . 2.99 77.53 31 4.89 No 11 0.45 No 0 0 No -30 0.81 Yes 47 69.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94160834 - NM_005591 MRE11 0 . . . 0.74 0 26 5.39 No 42 1.73 Yes 0 0 No -25 0.76 Yes 16 83.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1214388 + NM_000455 STK11 0 . . . 4.54 78.76 14 3.07 No -2 1.38 Yes 0 0 No -13 0.32 No 39 83.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29103215 - NM_001005735 CHEK2 0 . . . 4.72 78.5 22 5 No 2 1.45 Yes 0 0 No -21 0.92 Yes 48 75.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68814360 + NM_133509 RAD51B 0 . . . 0.82 70.18 28 4.66 No 58 -3.66 No 0 0 No -27 0.69 Yes 43 70.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89622040 + NM_000314 PTEN 0 . . . 2.11 0 19 4.13 No 24 -1.17 No 0 0 No -22 0.53 No 43 19.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47677220 + NM_000251 MSH2 0 . . . 4.2 84.74 25 6.93 Yes 30 0.2 No 0 0 No -29 0.66 No 23 92.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68929656 + NM_133509 RAD51B 0 . . . 6.66 82.47 28 5.2 No 24 1.14 Yes 0 0 No -27 0.85 Yes 44 83.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89679135 + NM_000314 PTEN 0 . . . 0.84 0 24 6.24 Yes 52 0.99 Yes 0 0 No -23 0.79 Yes 37 36.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68752433 + NM_133509 RAD51B 0 . . . 2.96 75.29 22 5.12 No 61 1.43 Yes 0 0 No -32 0.77 Yes 51 40.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47729300 + NM_000251 MSH2 0 . . . 3.06 76.95 26 5.24 No 76 0.81 Yes 0 0 No -25 0.87 Yes 48 57.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89671371 + NM_000314 PTEN 0 . . . 1.38 71.91 15 5.39 No 31 1.48 Yes 0 0 No -28 0.3 No 27 77.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68695821 + NM_133509 RAD51B 0 . . . 1.41 66.42 23 5.21 No 21 0.93 Yes 0 0 No -43 0.74 Yes 37 51.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47677407 + NM_000251 MSH2 0 . . . 1.67 76.91 25 5.11 No 43 0.35 No 0 0 No -24 0.6 No 54 82.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59927433 - NM_032043 BRIP1 0 . . . 0.42 64.55 15 5.53 No 36 -3.12 No 0 0 No -20 0.72 Yes 45 55.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37043635 + NM_000249 MLH1 0 . . . 3.02 74.17 41 5.78 Yes 7 0.98 Yes 0 0 No -34 0.6 No 51 86.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40998528 + NM_001164269 RAD51 0 . . . 6.45 67.78 19 5.57 Yes 16 1.13 Yes 0 0 No -27 0.72 Yes 42 81.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23627251 - NM_024675 PALB2 0 . . . 2.26 77.35 13 4.22 No 4 0.41 No 0 0 No -30 0.41 No 54 71.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190696602 + NM_000534 PMS1 0 . . . 7.95 86.2 26 5.47 No 9 1.22 Yes 0 0 No -19 0.59 No 49 71.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47776766 + NM_000251 MSH2 0 . . . 0.71 59.06 18 4.2 No 70 -4.76 No 0 0 No -26 0.64 No 59 22.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69099180 + NM_133509 RAD51B 0 . . . 2.8 0 16 5.7 Yes 68 -5.03 No 0 0 No -21 0.4 No 47 68.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29135843 - NM_001005735 CHEK2 0 . . . 1.22 66.72 16 5.48 No 7 0.93 Yes 0 0 No -23 0.39 No 48 46.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75486086 - NM_001040108 MLH3 0 . . . 3.91 88.55 26 5.19 No 54 2.11 Yes 0 0 No -25 0.72 Yes 8 7.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68596466 + NM_133509 RAD51B 0 . . . 2.88 73.5 21 4.9 No 41 0.06 No 0 0 No -20 0.81 Yes 51 68.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68984107 + NM_133509 RAD51B 0 . . . 4.24 70.81 35 6.31 Yes 34 0.65 No 0 0 No -17 0.32 No 44 40.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59766113 - NM_032043 BRIP1 0 . . . 9.36 89.4 18 6.24 Yes 44 1.09 Yes 0 0 No -25 0.75 Yes 46 97.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68955311 + NM_133509 RAD51B 0 . . . 7.32 84.1 9 3.87 No 16 1.13 Yes 0 0 No -26 0.69 Yes 42 83.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68832437 + NM_004360 CDH1 0 . . . 5.8 78.49 19 4.68 No 7 0.11 No 0 0 No -23 0.9 Yes 51 88.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68479420 + NM_133509 RAD51B 0 . . . 1.33 0 28 5.38 No 3 0.42 No 0 0 No -27 0.65 No 55 56.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68413269 + NM_133509 RAD51B 0 . . . 2.45 80.12 27 5.39 No 7 0.99 Yes 0 0 No -26 0.48 No 51 73.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68308585 + NM_133509 RAD51B 0 . . . 9.09 85.78 32 4.21 No 17 1.44 Yes 0 0 No -24 0.4 No 49 75.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68306546 + NM_133509 RAD51B 0 . . . 3.72 81.27 21 5.2 No 16 1.29 Yes 0 0 No -20 0.42 No 17 46.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69005209 + NM_133509 RAD51B 0 . . . 6.67 86 38 7.01 Yes 68 0.91 Yes 0 0 No -33 0.61 No 47 52.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41199690 - NM_007294 BRCA1 0 . . . 0.33 0 12 4.43 No 54 0.76 No 0 0 No -22 0.46 No 46 64.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84392535 - NM_139076 FAM175A 0 . . . 2.88 71.74 18 4.45 No 24 1.09 Yes 0 0 No -17 0.73 Yes 38 38.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68735738 + NM_133509 RAD51B 0 . . . 1.51 73.63 13 4.05 No 53 0.45 No 0 0 No -49 0.63 No 48 26.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1223881 + NM_000455 STK11 0 . . . 3.76 0 14 4.36 No 15 -2.16 No 0 0 No -28 0.86 Yes 43 78.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68492358 + NM_133509 RAD51B 0 . . . 7.46 79.53 24 4.8 No 59 0.49 No 0 0 No -40 0.43 No 47 61.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68388050 + NM_133509 RAD51B 0 . . . 2.83 0 16 5.2 No 10 0.85 Yes 0 0 No -20 0.48 No 43 89.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47628324 + NM_000251 MSH2 0 . . . 5.35 69.25 32 5.74 Yes 6 0.72 No 0 0 No -31 0.73 Yes 20 54.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89676756 + NM_000314 PTEN 0 . . . 4.48 73.22 19 4.34 No 65 0.54 No 0 0 No -18 0.26 No 50 74.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68780401 + NM_004360 CDH1 0 . . . 2.81 74.5 15 4.28 No 13 0.77 Yes 0 0 No -57 0.62 No 45 81.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48031186 + NM_000179 MSH6 0 . . . 2.25 0 36 6.24 Yes 66 -2.74 No 0 0 No -35 0.91 Yes 51 79.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68617714 + NM_133509 RAD51B 0 . . . 2.19 76.87 23 4.79 No 65 0.99 Yes 0 0 No -22 0.85 Yes 44 40.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47651310 + NM_000251 MSH2 0 . . . 1.69 86.9 48 6.9 Yes 37 1.34 Yes 0 0 No -27 0.91 Yes 47 63.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47775281 + NM_000251 MSH2 0 . . . 1.64 70.66 14 4.99 No 5 1 Yes 0 0 No -22 0.47 No 33 38.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68834316 + NM_004360 CDH1 0 . . . 5.58 84.01 17 5.4 No 22 1.11 Yes 0 0 No -26 0.52 No 36 87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215637196 - NM_000465 BARD1 0 . . . 6.69 81.67 26 5.32 No 42 0.87 Yes 0 0 No -26 0.83 Yes 43 89.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152361197 - NM_005431 XRCC2 0 . . . 7.55 86.22 12 5.39 No 68 -5.1 No 0 0 No -24 0.41 No 54 69.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89718285 + NM_000314 PTEN 0 . . . 1.12 81.83 35 5.01 No 39 1.25 Yes 0 0 No -23 0.85 Yes 19 93.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32967880 + NM_000059 BRCA2 0 . . . 3.84 77.19 26 4.76 No 34 0.54 No 0 0 No -24 0.42 No 16 40.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68456323 + NM_133509 RAD51B 0 . . . 4.69 86.41 19 4.33 No 64 -4.77 No 0 0 No -45 0.47 No 43 94.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90979647 - NM_002485 NBN 0 . . . 2.62 66.86 40 7.03 Yes 52 0.82 Yes 0 0 No -39 0.85 Yes 44 57.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152357079 - NM_005431 XRCC2 0 . . . 3.82 74.98 15 5.39 No 36 1.53 Yes 0 0 No -45 0.42 No 45 53.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89655073 + NM_000314 PTEN 0 . . . 1.36 78.96 22 4.48 No 55 -2.07 No 0 0 No -27 0.58 No 46 59.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68857653 + NM_133509 RAD51B 0 . . . 0.86 77.3 25 5.39 No 30 0.2 No 0 0 No -22 0.73 Yes 50 68.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45800868 - NM_001048171 MUTYH 0 . . . 2.97 59.89 19 4.98 No 73 -5.1 No 0 0 No -18 0.32 No 46 48.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94160285 - NM_005591 MRE11 0 . . . 7.72 88.17 24 4.9 No 55 1.16 Yes 0 0 No -23 0.47 No 44 83.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68774000 + NM_004360 CDH1 0 . . . 1.86 61.43 15 4.47 No 49 0.86 Yes 0 0 No -33 0.35 No 39 52.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69046370 + NM_133509 RAD51B 0 . . . 6.64 84.46 18 4.84 No 45 0.61 No 0 0 No -17 0.7 Yes 47 47.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47675506 + NM_000251 MSH2 0 . . . 8.2 78.09 34 6.68 Yes 2 0.07 No 0 0 No -29 0.58 No 42 40.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68404878 + NM_133509 RAD51B 0 . . . 3.73 67.39 45 6.86 Yes 47 0.14 No 0 0 No -21 0.5 No 51 61.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131892453 + NM_005732 RAD50 0 . . . 3.2 82 26 5.66 Yes 16 -1.41 No 0 0 No -25 0.92 Yes 52 36.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59916422 - NM_032043 BRIP1 0 . . . 8.66 91.39 18 4.36 No 47 0.43 No 0 0 No -44 0.66 Yes 42 75.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59849869 - NM_032043 BRIP1 0 . . . 1.16 63.53 28 5.83 Yes 15 0.12 No 0 0 No -27 0.75 Yes 43 89.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68299284 + NM_133509 RAD51B 0 . . . 3.76 66.5 28 5.83 Yes 8 0.37 No 0 0 No -27 0.72 Yes 49 50.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68468819 + NM_133509 RAD51B 0 . . . 9.91 87.76 21 5.72 Yes 55 0.52 No 0 0 No -21 0.49 No 46 58.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68828913 + NM_004360 CDH1 0 . . . 6.25 72.16 38 6.92 Yes -3 1.71 Yes 0 0 No -20 0.63 No 52 65.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108212406 + NM_000051 ATM 0 . . . 1.78 62.06 22 4.69 No -1 0.07 No 0 0 No -21 0.95 Yes 47 21.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47709361 + NM_000251 MSH2 0 . . . 5.71 89.32 24 6.42 Yes 32 0.02 No 0 0 No -23 0.2 No 50 76.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131924911 + NM_005732 RAD50 0 . . . 1.61 76.96 30 5.45 No 63 0.74 No 0 0 No -23 0.83 Yes 44 34.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56784594 + NM_058216 RAD51C 0 . . . 4.45 76.26 50 8.15 Yes 22 1.57 Yes 0 0 No -26 0.38 No 35 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108148588 + NM_000051 ATM 0 . . . 8.43 84.17 21 5.04 No 58 0.04 No 0 0 No -20 0.67 Yes 37 70.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94157495 - NM_005591 MRE11 0 . . . 7.88 79.48 22 4.58 No 76 1.53 Yes 0 0 No -35 0.77 Yes 42 85.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47786526 + NM_000251 MSH2 0 . . . 0.55 71.79 27 6.24 Yes 73 0.83 Yes 0 0 No -26 0.85 Yes 51 41.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68654321 + NM_133509 RAD51B 0 . . . 0.25 0 24 5.48 No 43 0.27 No 0 0 No -23 0.7 Yes 40 50.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69006743 + NM_133509 RAD51B 0 . . . 1.94 74.49 32 6.16 Yes 33 0.04 No 0 0 No -31 0.55 No 47 30.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6031120 - NM_000535 PMS2 0 . . . 4.02 73.95 52 5.57 Yes 52 0.55 No 0 0 No -29 0.72 Yes 51 56.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152348564 - NM_005431 XRCC2 0 . . . 0.43 0 13 5.55 No 15 1.31 Yes 0 0 No -27 0.57 No 50 56.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108165361 + NM_000051 ATM 0 . . . 6.56 88.68 14 3.87 No 4 0.54 No 0 0 No -13 0.4 No 43 84.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131923753 + NM_005732 RAD50 0 . . . 3.42 81.7 17 5.2 No 66 -3.85 No 0 0 No -54 0.5 No 43 33.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131951732 + NM_005732 RAD50 0 . . . 0.63 71.41 13 5.75 Yes 1 1.05 Yes 0 0 No -19 0.54 No 51 67.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29111187 - NM_001005735 CHEK2 0 . . . 7.16 79.37 25 5.1 No 33 0.56 No 0 0 No -24 0.78 Yes 46 65.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69024265 + NM_133509 RAD51B 0 . . . 4.58 75.51 12 4.63 No 38 0.11 No 0 0 No -34 0.83 Yes 42 85.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108197671 + NM_000051 ATM 0 . . . 0.28 80.91 26 5.51 No 33 1.51 Yes 0 0 No -22 0.71 Yes 25 56.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41272672 - NM_007294 BRCA1 0 . . . 0.08 67.27 39 6.84 Yes 17 1.18 Yes 0 0 No -30 0.49 No 41 91.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40999940 + NM_001164269 RAD51 0 . . . 0.26 0 21 5.04 No 72 -2.61 No 0 0 No -45 0.48 No 21 55.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94220559 - NM_005591 MRE11 0 . . . 6.72 77.01 33 6.23 Yes 68 1.38 Yes 0 0 No -35 0.69 Yes 47 89.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108238693 + NM_000051 ATM 0 . . . 0 52.63 19 5 No 38 0.35 No 0 0 No -21 0.85 Yes 56 32.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69073409 + NM_133509 RAD51B 0 . . . 2.47 75.56 21 6.31 Yes -1 0.31 No 0 0 No -33 0.65 No 45 51.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94195369 - NM_005591 MRE11 0 . . . 4.92 72.53 20 3.81 No 13 0.32 No 0 0 No -19 0.88 Yes 45 91.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131951429 + NM_005732 RAD50 0 . . . 1.78 73.09 33 5 No 17 0.59 No 0 0 No -20 0.39 No 49 68.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89691616 + NM_000314 PTEN 0 . . . 0.49 71.66 14 5.63 Yes 43 0.4 No 0 0 No -58 0.34 No 15 82.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68639106 + NM_133509 RAD51B 0 . . . 2.13 75.14 16 4.16 No 56 1.68 Yes 0 0 No -51 0.34 No 49 85.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37043349 + NM_000249 MLH1 0 . . . 1.21 0 29 5.52 No 39 1.43 Yes 0 0 No -28 0.8 Yes 23 86.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41225738 - NM_007294 BRCA1 0 . . . 3.2 72.43 34 6.63 Yes 60 0.45 No 0 0 No -31 0.59 No 43 70.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47675190 + NM_000251 MSH2 0 . . . 5.24 71.34 28 5.7 Yes 23 1.58 Yes 0 0 No -24 0.68 Yes 40 67.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68805684 + NM_004360 CDH1 0 . . . 1.77 84.56 9 3.87 No 73 -2 No 0 0 No -36 0.53 No 39 88.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108160044 + NM_000051 ATM 0 . . . 1.31 71.1 21 4.57 No -3 0.49 No 0 0 No -18 0.54 No 47 33.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68525256 + NM_133509 RAD51B 0 . . . 8.05 86.48 23 5.73 Yes 69 -3.95 No 0 0 No -22 0.58 No 47 70.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68821606 + NM_004360 CDH1 0 . . . 5.78 90.44 20 7.3 Yes 44 1.17 Yes 0 0 No -19 0.77 Yes 13 68.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108176355 + NM_000051 ATM 0 . . . 3.91 66.6 32 5.15 No -4 0.22 No 0 0 No -30 0.35 No 52 51.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56783311 + NM_058216 RAD51C 0 . . . 2.26 74.1 57 7.48 Yes 47 1.19 Yes 0 0 No -35 0.56 No 48 94.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69113613 + NM_133509 RAD51B 0 . . . 4.1 77.67 26 6 Yes 33 0.66 No 0 0 No -29 0.75 Yes 42 62.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40991668 + NM_001164269 RAD51 0 . . . 8.06 83.68 25 3.26 No 42 -1.48 No 0 0 No -24 0.49 No 38 82.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75485627 - NM_001040108 MLH3 0 . . . 2.4 71.16 34 6.21 Yes 72 1.63 Yes 0 0 No -33 0.67 Yes 44 83.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56808739 + NM_058216 RAD51C 0 . . . 1.08 84.22 16 5.83 Yes 33 1.26 Yes 0 0 No -15 0.22 No 50 38.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68841717 + NM_133509 RAD51B 0 . . . 0.12 0 18 3.94 No 45 -3.41 No 0 0 No -52 0.45 No 51 44.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190663468 + NM_000534 PMS1 0 . . . 13.22 87.64 23 5.33 No 24 0.74 No 0 0 No -30 0.57 No 49 75.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48005711 + NM_000179 MSH6 0 . . . 9.02 73.95 15 4.58 No 74 -2.85 No 0 0 No -24 0.68 Yes 40 80.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7583612 - NM_000546 TP53 0 . . . 5.41 74.28 20 5.46 No 12 0.67 No 0 0 No -19 0.58 No 46 75.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6015505 - NM_000535 PMS2 0 . . . 1.79 75.68 34 5.55 No 71 -4.44 No 0 0 No -33 0.83 Yes 50 27.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68979457 + NM_133509 RAD51B 0 . . . 7.54 76.09 18 4.69 No 6 1.29 Yes 0 0 No -40 0.8 Yes 37 49.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69078381 + NM_133509 RAD51B 0 . . . 3.04 73.39 17 5.46 No 6 -1.13 No 0 0 No -23 0.45 No 49 74.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108225781 + NM_000051 ATM 0 . . . 1.65 61.61 16 4.56 No 21 0.41 No 0 0 No -8 0.21 No 46 62.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68828599 + NM_133509 RAD51B 0 . . . 0.88 75.93 22 3.57 No 29 1.02 Yes 0 0 No -21 0.62 No 24 75.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68503134 + NM_133509 RAD51B 0 . . . 3.86 82.02 23 4.8 No 74 0.19 No 0 0 No -22 0.9 Yes 55 33.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29083697 - NM_001005735 CHEK2 0 . . . 3.24 68.76 15 6.61 Yes 1 0.87 Yes 0 0 No -31 0.65 No 54 50.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89687719 + NM_000314 PTEN 0 . . . 5.83 75.92 23 5.13 No 0 0.63 No 0 0 No -25 0.57 No 47 74.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68572305 + NM_133509 RAD51B 0 . . . 1.58 65.22 18 5.39 No 19 0.24 No 0 0 No -43 0.52 No 39 42.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68750624 + NM_133509 RAD51B 0 . . . 4 71.27 50 8.05 Yes 19 0.03 No 0 0 No -43 0.81 Yes 39 70.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47726331 + NM_000251 MSH2 0 . . . 0.71 66.64 54 9.67 Yes 30 0.17 No 0 0 No -24 0.75 Yes 47 54.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29131229 - NM_001005735 CHEK2 0 . . . 5.2 85.02 39 6.2 Yes 5 1.23 Yes 0 0 No -21 0.64 No 53 80.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47666285 + NM_000251 MSH2 0 . . . 6.7 77.84 15 4.36 No 36 0.18 No 0 0 No -33 0.36 No 36 83.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69063388 + NM_133509 RAD51B 0 . . . 1.49 73.27 29 5.29 No 62 -4.37 No 0 0 No -29 0.58 No 51 53.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29095761 - NM_001005735 CHEK2 0 . . . 4.6 69.26 26 5.09 No 28 0.88 Yes 0 0 No -25 0.74 Yes 30 38.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59889368 - NM_032043 BRIP1 0 . . . 2.89 70.61 18 6.46 Yes 23 0.97 Yes 0 0 No -22 0.82 Yes 43 43.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6033985 - NM_000535 PMS2 0 . . . 1.23 71.68 87 7.78 Yes 73 -1.29 No 0 0 No -33 0.58 No 44 36.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84403693 - NM_139076 FAM175A 0 . . . 6.24 94.45 27 5.2 No 12 1.65 Yes 0 0 No -56 0.57 No 42 79.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68541500 + NM_133509 RAD51B 0 . . . 8.32 85.6 22 5.74 Yes 11 1.04 Yes 0 0 No -21 0.8 Yes 47 71.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94168621 - NM_005591 MRE11 0 . . . 1.1 83.16 45 7.87 Yes 33 1.15 Yes 0 0 No -44 0.47 No 50 62.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41245453 - NM_007294 BRCA1 0 . . . 3.13 81.2 18 4.11 No 6 0.19 No 0 0 No -37 0.3 No 52 54.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56798872 + NM_058216 RAD51C 0 . . . 1.47 74.68 30 6.42 Yes 52 0.25 No 0 0 No -29 0.43 No 46 68.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108205892 + NM_000051 ATM 0 . . . 1.05 60.83 22 4.78 No 41 0.7 No 0 0 No -21 0.69 Yes 56 48.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47741961 + NM_000251 MSH2 0 . . . 2.04 68.55 40 6.29 Yes 34 1.19 Yes 0 0 No -25 0.56 No 16 73.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32952527 + NM_000059 BRCA2 0 . . . 1.9 80.26 23 4.69 No -2 0.83 Yes 0 0 No -22 0.78 Yes 42 73.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68812398 + NM_133509 RAD51B 0 . . . 3.01 0 32 6.79 Yes 29 0.94 Yes 0 0 No -26 0.63 No 29 73.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32959842 + NM_000059 BRCA2 0 . . . 3.89 73.17 11 4.12 No 50 0.45 No 0 0 No -53 0.48 No 48 50.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59905013 - NM_032043 BRIP1 0 . . . 5.72 88.14 22 6.08 Yes 9 1.38 Yes 0 0 No -21 0.47 No 49 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108113461 + NM_000051 ATM 0 . . . 4.68 75.86 26 5.09 No 55 0.47 No 0 0 No -25 0.84 Yes 48 60.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68893372 + NM_133509 RAD51B 0 . . . 0.59 73.17 40 6.4 Yes 51 -4.93 No 0 0 No -36 0.45 No 46 35.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69109540 + NM_133509 RAD51B 0 . . . 0.89 63.17 19 5.82 Yes 19 0.34 No 0 0 No -18 0.51 No 39 70.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47790830 + NM_000251 MSH2 0 . . . 1.74 73.7 21 5.1 No -2 0.31 No 0 0 No -26 0.4 No 46 63.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68941386 + NM_133509 RAD51B 0 . . . 9.41 90.6 36 6.78 Yes 58 1.11 Yes 0 0 No -35 0.76 Yes 38 49.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41008977 + NM_001164269 RAD51 0 . . . 4.42 84.22 15 3.73 No 8 1.13 Yes 0 0 No -22 0.65 No 50 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68967256 + NM_133509 RAD51B 0 . . . 3.62 85.98 14 4.79 No 9 0.69 No 0 0 No -22 0.65 No 45 79.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1216223 + NM_000455 STK11 0 . . . 1.2 61.8 18 4.9 No -2 0.38 No 21 0.75 Yes -41 0.83 Yes 42 48.15 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 68473055 + NM_133509 RAD51B 0 . . . 0.51 0 20 4.8 No 53 0.62 No 0 0 No -24 0.76 Yes 53 46.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41211065 - NM_007294 BRCA1 0 . . . 4.95 68.16 21 5.66 Yes 4 1.18 Yes 0 0 No -29 0.32 No 54 69.61 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94183902 - NM_005591 MRE11 0 . . . 5.92 96.18 28 6.47 Yes 13 1.17 Yes 0 0 No -26 0.53 No 45 75.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68531817 + NM_133509 RAD51B 0 . . . 6.21 80.18 19 6.78 Yes 69 0.61 No 0 0 No -18 0.38 No 44 72.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56781941 + NM_058216 RAD51C 0 . . . 3.78 72.72 13 5.07 No 69 1.2 Yes 0 0 No -25 0.36 No 36 77.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68606339 + NM_133509 RAD51B 0 . . . 5.03 84.05 20 4.69 No -1 0.55 No 0 0 No -19 0.35 No 45 38.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59889688 - NM_032043 BRIP1 0 . . . 6.61 70.67 27 6.81 Yes 41 0.05 No 0 0 No -27 0.72 Yes 40 45.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68948880 + NM_133509 RAD51B 0 . . . 1.93 70.27 24 5 No 44 0.59 No 0 0 No -23 0.89 Yes 46 61.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59795601 - NM_032043 BRIP1 0 . . . 4.94 77.05 22 6.38 Yes 63 0.82 Yes 0 0 No -21 0.92 Yes 47 67.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59813468 - NM_032043 BRIP1 0 . . . 1.81 78.04 24 7.03 Yes 61 1.39 Yes 0 0 No -22 0.72 Yes 43 45.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215598612 - NM_000465 BARD1 0 . . . 5.78 78.93 15 5.03 No 18 1.78 Yes 0 0 No -19 0.53 No 40 83.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68448606 + NM_133509 RAD51B 0 . . . 1.04 59.54 25 5.39 No 1 0.08 No 0 0 No -22 0.75 Yes 48 52.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33446796 - NM_002878 RAD51D 0 . . . 0.4 68.59 25 5.56 Yes -4 1.22 Yes 26 0.83 Yes -24 0.93 Yes 60 19.62 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr14 69048303 + NM_133509 RAD51B 0 . . . 3.58 69.65 23 7.34 Yes 53 -3.73 No 0 0 No -22 0.89 Yes 39 26.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90977315 - NM_002485 NBN 0 . . . 5.22 90.44 23 5.39 No 38 1.08 Yes 0 0 No -22 0.91 Yes 20 90.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68299010 + NM_133509 RAD51B 0 . . . 5.47 87.98 24 4.89 No 67 0.82 Yes 0 0 No -23 0.91 Yes 48 76.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68468347 + NM_133509 RAD51B 0 . . . 5.91 72.87 22 5.54 No 64 -2.85 No 0 0 No -29 0.68 Yes 34 57.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68596827 + NM_133509 RAD51B 0 . . . 8 89.61 23 4.78 No 24 0.57 No 0 0 No -19 0.78 Yes 47 71.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69143916 + NM_133509 RAD51B 0 . . . 2.02 62.35 12 6.08 Yes 76 0.01 No 0 0 No -31 0.32 No 47 65.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104172070 - NM_001100119 XRCC3 0 . . . 2.23 79.8 20 3.65 No 50 1.81 Yes 0 0 No -36 0.32 No 46 47.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68832949 + NM_133509 RAD51B 0 . . . 1.16 70.2 22 4.91 No 8 1.34 Yes 0 0 No -31 0.53 No 50 56.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68494666 + NM_133509 RAD51B 0 . . . 5.38 67.35 29 4.17 No 10 1.45 Yes 0 0 No -28 0.44 No 48 74.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69002084 + NM_133509 RAD51B 0 . . . 4.44 0 17 6.92 Yes 56 1.99 Yes 0 0 No -29 0.58 No 40 78.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41266259 - NM_007294 BRCA1 0 . . . 5.18 90.25 32 3.91 No 11 0.57 No 0 0 No -31 0.89 Yes 47 78.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190656473 + NM_000534 PMS1 0 . . . 5.81 80.95 16 4.66 No 35 0.74 No 24 0.94 Yes -21 0.47 No 33 68.28 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr22 29096175 - NM_001005735 CHEK2 0 . . . 2.56 66.77 10 4.81 No 51 0.43 No 0 0 No -22 0.46 No 47 69.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94203783 - NM_005591 MRE11 0 . . . 4.07 72.35 26 5.1 No 42 1.3 Yes 0 0 No -25 0.78 Yes 16 70.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131973461 + NM_005732 RAD50 0 . . . 9.09 86.36 28 4.78 No 59 1.18 Yes 0 0 No -27 0.68 Yes 54 69.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68631930 + NM_133509 RAD51B 0 . . . 2.23 0 25 4.85 No 67 0.95 Yes 0 0 No -24 0.48 No 45 82.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47719208 + NM_000251 MSH2 0 . . . 1.03 68.25 20 4.78 No 17 1.22 Yes 0 0 No -19 0.75 Yes 41 56.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68814306 + NM_004360 CDH1 0 . . . 1.51 68.36 23 4.83 No 16 1.06 Yes 0 0 No -22 0.75 Yes 42 91.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68873080 + NM_133509 RAD51B 0 . . . 0.8 0 22 5.91 Yes 73 -4.45 No 0 0 No -25 0.46 No 47 65.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68771459 + NM_133509 RAD51B 0 . . . 3.81 81.61 28 5.1 No -1 0.3 No 0 0 No -27 0.88 Yes 43 82.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68827962 + NM_004360 CDH1 0 . . . 5.15 83.29 27 5.74 Yes 51 0.16 No 0 0 No -26 0.83 Yes 37 69.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190657746 + NM_000534 PMS1 0 . . . 0.75 67.63 27 5.39 No 19 -3.35 No 0 0 No -23 0.59 No 14 62.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68919503 + NM_133509 RAD51B 0 . . . 0.49 61.21 20 5.1 No 20 1.58 Yes 0 0 No -25 0.53 No 34 79.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108126078 + NM_000051 ATM 0 . . . 9.96 84.57 31 4.66 No 56 1.53 Yes 0 0 No -25 0.65 No 26 67.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47647896 + NM_000251 MSH2 0 . . . 1.08 84.22 23 3.33 No 76 1.49 Yes 0 0 No -42 0.42 No 51 37.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131962757 + NM_005732 RAD50 0 . . . 2.78 80.12 12 5.15 No 63 1.39 Yes 0 0 No -29 0.21 No 51 66.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21971551 - NM_000077 CDKN2A 0 . . . 3.92 78.31 17 4.47 No 0 0.63 No 0 0 No -16 0.64 No 51 56.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23617315 - NM_024675 PALB2 0 . . . 0.12 63.82 54 5.95 Yes 72 -2.76 No 0 0 No -28 0.6 No 55 51.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1221393 + NM_000455 STK11 0 . . . 1.81 79.81 25 4.9 No 54 1.11 Yes 0 0 No -25 0.48 No 51 46.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89624938 + NM_000314 PTEN 0 . . . 1.96 67.16 22 7.02 Yes 31 -3.43 No 0 0 No -30 0.52 No 40 61.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668294 - NM_000465 BARD1 0 . . . 1.38 76.05 25 7 Yes 57 -5 No 0 0 No -24 0.7 Yes 48 69.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89673551 + NM_000314 PTEN 0 . . . 10.27 89.8 23 4.78 No 36 0.54 No 0 0 No -22 0.69 Yes 47 90.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108187360 + NM_000051 ATM 0 . . . 3.94 86.41 41 6.47 Yes 25 0.64 No 0 0 No -40 0.56 No 39 39.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6010891 - NM_000535 PMS2 0 . . . 1.9 0 25 3.55 No 39 1.35 Yes 0 0 No -24 0.65 No 19 87.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45794867 - NM_001048171 MUTYH 0 . . . 1.62 77.92 11 4.69 No 74 0.55 No 0 0 No -27 0.7 Yes 22 62.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68639688 + NM_133509 RAD51B 0 . . . 2.77 73.36 20 3.89 No 62 0.32 No 0 0 No -38 0.51 No 47 68.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68377990 + NM_133509 RAD51B 0 . . . 0.74 66.64 22 4.22 No 46 0.47 No 0 0 No -20 0.36 No 28 68.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190683242 + NM_000534 PMS1 0 . . . 2.04 75.15 54 6.9 Yes 68 -3.72 No 0 0 No -24 0.73 Yes 40 77.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29129297 - NM_001005735 CHEK2 0 . . . 0.98 62.04 23 4.28 No -2 0.59 No 0 0 No -22 0.87 Yes 37 64.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41017135 + NM_001164269 RAD51 0 . . . 4.48 84.17 20 5.57 Yes 63 1.22 Yes 0 0 No -19 0.7 Yes 11 60.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89685595 + NM_000314 PTEN 0 . . . 2.69 64.42 35 5.62 Yes 52 0.38 No 0 0 No -30 0.6 No 51 50.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105183520 + NM_021930 RINT1 0 . . . 5.88 78.68 48 7.48 Yes 11 1.25 Yes 0 0 No -31 0.56 No 47 93.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37037871 + NM_000249 MLH1 0 . . . 1.03 84.72 39 7.57 Yes 13 1.11 Yes 0 0 No -30 0.76 Yes 45 66.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94188977 - NM_005591 MRE11 0 . . . 1.06 78.77 22 6.85 Yes 3 0.56 No 0 0 No -21 0.96 Yes 49 85.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68411577 + NM_133509 RAD51B 0 . . . 6.04 78 63 5.52 No 18 1.59 Yes 0 0 No -25 0.65 No 40 91.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108142295 + NM_000051 ATM 0 . . . 0.79 0 15 3.64 No 60 1.4 Yes 0 0 No -20 0.74 Yes 43 58.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59806041 - NM_032043 BRIP1 0 . . . 3.58 69.1 41 6.48 Yes 41 1.5 Yes 0 0 No -40 0.49 No 40 63.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68636083 + NM_133509 RAD51B 0 . . . 3.08 77.16 19 4.86 No 51 0.99 Yes 0 0 No -26 0.89 Yes 46 69.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47771625 + NM_000251 MSH2 0 . . . 3.45 78.92 26 3.71 No 4 1.69 Yes 0 0 No -25 0.9 Yes 47 90.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215639330 - NM_000465 BARD1 0 . . . 6.57 77.24 29 5.92 Yes 1 0.87 Yes 0 0 No -28 0.95 Yes 51 48.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75508890 - NM_001040108 MLH3 0 . . . 3.6 86.41 28 5.48 No 67 -4.72 No 0 0 No -25 0.56 No 48 87.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68837345 + NM_004360 CDH1 0 . . . 8.4 89.36 13 4.36 No 16 -1.47 No 0 0 No -23 0.23 No 44 41.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90972279 - NM_002485 NBN 0 . . . 6.8 72.78 36 5.2 No 28 0.91 Yes 0 0 No -28 0.81 Yes 42 60.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52444733 - NM_004656 BAP1 0 . . . 1.23 0 17 5.82 Yes 69 1.32 Yes 0 0 No -28 0.66 Yes 56 28.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69127047 + NM_133509 RAD51B 0 . . . 0.2 64.32 61 7.7 Yes 21 0.67 No 0 0 No -28 0.94 Yes 47 41.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47639421 + NM_000251 MSH2 0 . . . 0.7 69.54 18 4.9 No 51 0.36 No 0 0 No -56 0.28 No 55 41.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32955345 + NM_000059 BRCA2 0 . . . 2.97 72.71 13 5.2 No 40 0.88 Yes 0 0 No -40 0.53 No 37 79.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131902625 + NM_005732 RAD50 0 . . . 0.65 0 24 6.24 Yes 62 1.08 Yes 0 0 No -57 0.55 No 23 62.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68959991 + NM_133509 RAD51B 0 . . . 5.83 62.44 36 4.74 No 71 0.37 No 0 0 No -25 0.62 No 45 84.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52442256 - NM_004656 BAP1 0 . . . 0.4 72.82 28 7.02 Yes 32 1.16 Yes 0 0 No -28 0.46 No 54 40.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45799453 - NM_001048171 MUTYH 0 . . . 3.45 77.64 33 5.46 No 69 0.7 No 0 0 No -26 0.8 Yes 47 62.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215670993 - NM_000465 BARD1 0 . . . 4.96 75.73 47 5.16 No 2 0.99 Yes 0 0 No -21 0.76 Yes 47 70.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89722621 + NM_000314 PTEN 0 . . . 7.49 80.98 32 5.57 Yes 39 0.59 No 0 0 No -31 0.92 Yes 46 57.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48030853 + NM_000179 MSH6 0 . . . 4.23 0 48 7.5 Yes 10 0.57 No 0 0 No -37 0.54 No 48 92.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215657669 - NM_000465 BARD1 0 . . . 1.05 0 27 7.62 Yes 10 1.46 Yes 0 0 No -26 0.94 Yes 48 90.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108148731 + NM_000051 ATM 0 . . . 1.85 70.48 22 4.3 No 61 0.54 No 0 0 No -24 0.54 No 47 20.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69143377 + NM_133509 RAD51B 0 . . . 4.96 80.41 37 6.56 Yes 18 -0.69 No 0 0 No -36 0.92 Yes 40 71.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68479493 + NM_133509 RAD51B 0 . . . 1.89 70.05 19 4.69 No 1 1.52 Yes 0 0 No -18 0.86 Yes 40 27.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69083650 + NM_133509 RAD51B 0 . . . 1.98 77.28 16 5.39 No 24 2.35 Yes 0 0 No -22 0.62 No 41 89.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29101879 - NM_001005735 CHEK2 0 . . . 1.65 64.99 24 4.89 No 28 0.75 No 0 0 No -21 0.57 No 18 46.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41000428 + NM_001164269 RAD51 0 . . . 4.23 76.34 17 4.72 No 35 1.03 Yes 0 0 No -16 0.33 No 18 50.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47756058 + NM_000251 MSH2 0 . . . 7.62 88.81 38 7.22 Yes 7 1.32 Yes 0 0 No -37 0.5 No 51 89.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47652084 + NM_000251 MSH2 0 . . . 3.92 80.31 38 4.91 No -2 0.36 No 0 0 No -23 0.58 No 46 47.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68958763 + NM_133509 RAD51B 0 . . . 5.76 81.38 27 5.48 No 49 1.3 Yes 0 0 No -26 0.51 No 52 63.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69008493 + NM_133509 RAD51B 0 . . . 0.32 0 16 5.72 Yes 72 0.33 No 0 0 No -19 0.84 Yes 41 71.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68631022 + NM_133509 RAD51B 0 . . . 0.55 61.7 28 5.39 No 1 0.01 No 0 0 No -27 0.92 Yes 46 63.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108140041 + NM_000051 ATM 0 . . . 0.54 0 24 4.89 No 23 -3.46 No 0 0 No -26 0.69 Yes 39 74.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69116329 + NM_133509 RAD51B 0 . . . 0.48 77.8 54 7.32 Yes 9 1.16 Yes 0 0 No -25 0.51 No 48 64.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47723853 + NM_000251 MSH2 0 . . . 2.53 76.75 30 5.74 Yes 54 -2.6 No 0 0 No -26 0.51 No 45 82.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68617833 + NM_133509 RAD51B 0 . . . 4.85 67.2 21 4.92 No 2 0.53 No 0 0 No -25 0.69 Yes 43 75.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56799257 + NM_058216 RAD51C 0 . . . 3.97 76.77 78 6.64 Yes -1 1.18 Yes 0 0 No -29 0.7 Yes 42 61.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41258250 - NM_007294 BRCA1 0 . . . 6.4 75.5 28 7.04 Yes -2 1 Yes 0 0 No -30 0.55 No 46 97.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59929836 - NM_032043 BRIP1 0 . . . 0.42 74.73 31 4.96 No 33 1.13 Yes 0 0 No -25 0.91 Yes 39 42.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21971805 - NM_000077 CDKN2A 0 . . . 6.81 73.82 19 4.8 No 8 0.82 Yes 0 0 No -27 0.48 No 46 66.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190714693 + NM_000534 PMS1 0 . . . 2.81 74.7 30 5.35 No 50 0.18 No 0 0 No -22 0.49 No 40 89.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59838323 - NM_032043 BRIP1 0 . . . 1.61 79.48 38 6.08 Yes 66 0.78 Yes 0 0 No -24 0.85 Yes 28 66.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68990759 + NM_133509 RAD51B 0 . . . 3.75 72.68 38 6.06 Yes 53 0.59 No 0 0 No -22 0.86 Yes 50 39.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68494980 + NM_133509 RAD51B 0 . . . 4.78 84.3 17 5.29 No 1 1.08 Yes 0 0 No -27 0.35 No 57 27.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68550459 + NM_133509 RAD51B 0 . . . 3.89 77.03 16 4.69 No 24 0.13 No 0 0 No -23 0.82 Yes 45 79.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41216116 - NM_007294 BRCA1 0 . . . 1.48 0 19 4.96 No 57 0.52 No 0 0 No -18 0.63 No 52 64.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37080735 + NM_000249 MLH1 0 . . . 2.9 82.67 30 5.57 Yes 71 0.57 No 0 0 No -29 0.43 No 26 62.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68960744 + NM_133509 RAD51B 0 . . . 0.32 74.68 29 5.23 No 4 0.1 No 0 0 No -25 0.38 No 54 72.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47766989 + NM_000251 MSH2 0 . . . 0.35 0 23 5.31 No 48 0.44 No 0 0 No -28 0.84 Yes 56 27.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37082684 + NM_000249 MLH1 0 . . . 4.44 83.52 12 4.24 No -1 0.81 Yes 0 0 No -24 0.93 Yes 52 57.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68402854 + NM_133509 RAD51B 0 . . . 0.76 65.48 29 5.19 No 50 0.68 No 0 0 No -28 0.9 Yes 30 83.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108119098 + NM_000051 ATM 0 . . . 1.15 0 19 5.57 Yes 69 0.47 No 0 0 No -26 0.62 No 39 59.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89698026 + NM_000314 PTEN 0 . . . 4.66 75.82 31 5.15 No 53 1.08 Yes 0 0 No -30 0.63 No 37 75.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94152558 - NM_005591 MRE11 0 . . . 4.17 63.29 22 5.89 Yes 8 -1.09 No 0 0 No -21 0.86 Yes 15 69.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47755614 + NM_000251 MSH2 0 . . . 0.85 0 55 6.92 Yes 63 0.22 No 0 0 No -44 0.69 Yes 53 72.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29083667 - NM_001005735 CHEK2 0 . . . 4.03 82.92 29 5.56 Yes 31 0.85 Yes 0 0 No -28 0.66 No 38 61.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47741142 + NM_000251 MSH2 0 . . . 1.92 0 14 4.47 No 49 1.06 Yes 0 0 No -51 0.34 No 37 51.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108205087 + NM_000051 ATM 0 . . . 3.62 72.04 28 6.31 Yes 34 -4.4 No 0 0 No -33 0.6 No 39 50.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68632241 + NM_133509 RAD51B 0 . . . 1.61 71.37 35 6 Yes 26 0.63 No 0 0 No -34 0.7 Yes 41 84.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32964297 + NM_000059 BRCA2 0 . . . 1.96 83.51 28 6.55 Yes -4 0.42 No 0 0 No -27 0.81 Yes 46 67.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69039786 + NM_133509 RAD51B 0 . . . 4.79 84.13 26 4.24 No 9 0.89 Yes 0 0 No -25 0.72 Yes 49 66.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37046777 + NM_000249 MLH1 0 . . . 2.68 68.53 11 5.1 No 2 0.25 No 0 0 No -28 0.66 No 42 44.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21970552 - NM_000077 CDKN2A 0 . . . 9.22 75.83 15 5.08 No 59 -2.99 No 0 0 No -20 0.81 Yes 45 77.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59768403 - NM_032043 BRIP1 0 . . . 5.5 72.7 25 5.25 No 62 1.99 Yes 0 0 No -24 0.93 Yes 47 89.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68801047 + NM_004360 CDH1 0 . . . 6.17 80.05 21 5.2 No 41 0.63 No 0 0 No -20 0.87 Yes 46 74.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68848018 + NM_004360 CDH1 0 . . . 3.6 69.79 16 5.1 No 59 1.07 Yes 0 0 No -22 0.72 Yes 42 59.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68952265 + NM_133509 RAD51B 0 . . . 2.8 55.53 17 6.08 Yes 11 0.15 No 0 0 No -27 0.43 No 47 64.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94166842 - NM_005591 MRE11 0 . . . 1.96 69.71 12 4.24 No 0 0.13 No 0 0 No -29 0.25 No 45 68.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108206403 + NM_000051 ATM 0 . . . 1.69 67.58 31 6.08 Yes 44 -4.1 No 0 0 No -47 0.4 No 50 83.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68400120 + NM_133509 RAD51B 0 . . . 3.93 83.39 19 4.87 No 6 0.43 No 0 0 No -18 0.41 No 52 51.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68972101 + NM_133509 RAD51B 0 . . . 1.51 71.44 15 4.11 No 76 0.09 No 0 0 No -22 0.54 No 47 85.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68620531 + NM_133509 RAD51B 0 . . . 0.67 58.29 16 5.29 No 39 0.58 No 0 0 No -28 0.41 No 35 84.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47643746 + NM_000251 MSH2 0 . . . 1.75 75.62 22 5.28 No 28 0.65 No 0 0 No -27 0.57 No 43 75.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68794865 + NM_004360 CDH1 0 . . . 3.45 79.52 15 4.58 No 57 1.02 Yes 0 0 No -57 0.56 No 35 23.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68667349 + NM_133509 RAD51B 0 . . . 4.66 82.39 15 5.05 No 62 -4.55 No 0 0 No -26 0.46 No 48 68.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68400538 + NM_133509 RAD51B 0 . . . 6.34 75.8 15 3.91 No 31 0.74 No 0 0 No -39 0.36 No 52 58.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47651933 + NM_000251 MSH2 0 . . . 0.92 79.83 16 4.58 No 4 0.23 No 0 0 No -20 0.63 No 54 83.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68593600 + NM_133509 RAD51B 0 . . . 5.62 89.26 16 4.69 No 76 -3.5 No 0 0 No -26 0.56 No 44 74.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68383434 + NM_133509 RAD51B 0 . . . 7.72 85.16 23 4.93 No 9 1.77 Yes 0 0 No -22 0.84 Yes 49 92.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89681575 + NM_000314 PTEN 0 . . . 1.61 69.46 27 4.95 No 0 0.37 No 0 0 No -26 0.8 Yes 40 65.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89658105 + NM_000314 PTEN 0 . . . 1.46 67.5 23 6.32 Yes 60 -4.74 No 0 0 No -22 0.87 Yes 39 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59934892 - NM_032043 BRIP1 0 . . . 1.45 74.26 22 6.08 Yes 33 1.16 Yes 0 0 No -24 0.67 Yes 25 49.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215655794 - NM_000465 BARD1 0 . . . 2.9 61.73 28 5.83 Yes 40 0.2 No 0 0 No -27 0.9 Yes 38 68.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1217383 + NM_000455 STK11 0 . . . 2.24 80.12 24 4.06 No 7 1.16 Yes 0 0 No -23 0.71 Yes 51 82.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37043848 + NM_000249 MLH1 0 . . . 1.07 72.31 44 7.67 Yes 71 1.05 Yes 0 0 No -35 0.38 No 44 71.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68793114 + NM_133509 RAD51B 0 . . . 4.52 71.11 31 6.07 Yes 1 0.76 No 0 0 No -30 0.57 No 47 56.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23630210 - NM_024675 PALB2 0 . . . 3.88 0 38 5.72 Yes 34 0.66 No 0 0 No -37 0.65 No 47 57.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47673632 + NM_000251 MSH2 0 . . . 2.37 67.39 17 5.92 Yes 13 0.7 No 0 0 No -26 0.46 No 34 57.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68804793 + NM_004360 CDH1 0 . . . 1.51 0 23 5.13 No 35 -1.82 No 0 0 No -23 0.75 Yes 49 69.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69104125 + NM_133509 RAD51B 0 . . . 1.56 53.27 14 5.1 No 1 0.96 Yes 0 0 No -44 0.89 Yes 32 44.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68320474 + NM_133509 RAD51B 0 . . . 8.47 80.72 46 5.74 Yes -2 0 No 0 0 No -45 0.59 No 38 61.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69147745 + NM_133509 RAD51B 0 . . . 0.19 62.05 20 4.45 No 51 0.51 No 0 0 No -20 0.64 No 46 36.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68962546 + NM_133509 RAD51B 0 . . . 0.56 72.13 55 5.82 Yes 38 1.13 Yes 0 0 No -28 0.58 No 32 21.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68594521 + NM_133509 RAD51B 0 . . . 5.5 79.1 19 3.69 No 32 1.04 Yes 0 0 No -21 0.64 No 44 63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89633426 + NM_000314 PTEN 0 . . . 0.19 57.9 26 5.53 No 42 -3.78 No 0 0 No -26 0.75 Yes 31 53.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108122435 + NM_000051 ATM 0 . . . 3.01 64.66 20 4.9 No 31 0.49 No 0 0 No -19 0.83 Yes 43 89.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94200117 - NM_005591 MRE11 0 . . . 2.85 0 27 6.63 Yes 32 1.09 Yes 0 0 No -26 0.77 Yes 50 96.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190682409 + NM_000534 PMS1 0 . . . 3.11 74.99 17 4.05 No 20 0.53 No 0 0 No -47 0.5 No 37 46.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105173152 + NM_021930 RINT1 0 . . . 1.15 77.58 19 4.69 No 71 -4.37 No 0 0 No -37 0.78 Yes 46 54.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108145623 + NM_000051 ATM 0 . . . 0.94 83.74 17 5.42 No 5 -2.05 No 0 0 No -24 0.82 Yes 53 54.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68904913 + NM_133509 RAD51B 0 . . . 1.44 0 46 5.93 Yes 75 -3 No 0 0 No -32 0.6 No 53 66.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47656053 + NM_000251 MSH2 0 . . . 0.56 0 100 10.45 Yes 9 0.69 No 0 0 No -28 0.78 Yes 37 40.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68392108 + NM_133509 RAD51B 0 . . . 0.78 84.22 29 5.4 No 33 1.36 Yes 0 0 No -25 0.49 No 50 59.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68604700 + NM_133509 RAD51B 0 . . . 1.59 68.84 28 7.05 Yes 41 -1.24 No 0 0 No -33 0.77 Yes 47 75.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94185360 - NM_005591 MRE11 0 . . . 3.84 88.76 38 5.98 Yes 58 0.14 No 0 0 No -37 0.72 Yes 40 59.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131909891 + NM_005732 RAD50 0 . . . 4.84 78.63 18 4.47 No 52 0.33 No 0 0 No -31 0.49 No 49 56.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190657582 + NM_000534 PMS1 0 . . . 4.63 93.02 14 3.68 No 73 0.76 No 0 0 No -23 0.59 No 16 57.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190697908 + NM_000534 PMS1 0 . . . 0.1 0 18 4.49 No 60 1.77 Yes 0 0 No -26 0.38 No 43 91.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68366332 + NM_133509 RAD51B 0 . . . 7.1 86.46 38 5.39 No 73 0.86 Yes 0 0 No -37 0.73 Yes 42 62.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152351342 - NM_005431 XRCC2 0 . . . 4.3 76.82 15 4.39 No 50 0.85 Yes 0 0 No -44 0.4 No 21 85.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68476593 + NM_133509 RAD51B 0 . . . 2.62 72.51 16 5.77 Yes 74 0.96 Yes 0 0 No -25 0.65 No 50 63.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190653736 + NM_000534 PMS1 0 . . . 5.12 78.03 29 7.91 Yes 54 1.17 Yes 0 0 No -28 0.95 Yes 39 65.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52438818 - NM_004656 BAP1 0 . . . 4.3 79.51 19 5.66 Yes 63 -3.38 No 0 0 No -22 0.61 No 48 49.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215662087 - NM_000465 BARD1 0 . . . 8.1 76.86 14 4.47 No 30 -1.8 No 0 0 No -32 0.54 No 39 56.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29107596 - NM_001005735 CHEK2 0 . . . 3.23 66.49 21 3.8 No 67 0.1 No 0 0 No -20 0.95 Yes 42 78.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89717313 + NM_000314 PTEN 0 . . . 3.08 75.92 18 4.22 No 42 0.44 No 0 0 No -32 0.77 Yes 49 55.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47688383 + NM_000251 MSH2 0 . . . 6.57 77.42 13 5.16 No 8 0.71 No 0 0 No -21 0.81 Yes 38 51.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108170896 + NM_000051 ATM 0 . . . 2.89 78.39 34 5.92 Yes 52 -5.14 No 0 0 No -28 0.32 No 49 19.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68875946 + NM_133509 RAD51B 0 . . . 7.53 87.76 22 5.2 No 20 0.12 No 0 0 No -27 0.32 No 50 36.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32966319 + NM_000059 BRCA2 0 . . . 3.94 70.49 25 5.05 No 76 0.2 No 0 0 No -24 0.78 Yes 49 27.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68633059 + NM_133509 RAD51B 0 . . . 6.3 91.69 22 4.69 No 4 1.08 Yes 0 0 No -21 0.51 No 45 53.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68484123 + NM_133509 RAD51B 0 . . . 4.39 71.62 13 4.36 No 33 0.86 Yes 0 0 No -24 0.51 No 14 27.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108193065 + NM_000051 ATM 0 . . . 4.93 80.52 64 5.19 No 7 1.21 Yes 0 0 No -39 0.43 No 51 86.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108202505 + NM_000051 ATM 0 . . . 5.01 82.46 30 5.57 Yes 64 0.99 Yes 0 0 No -29 0.82 Yes 15 73.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32966574 + NM_000059 BRCA2 0 . . . 0.32 74.68 26 5 No 4 0.1 No 0 0 No -25 0.68 Yes 54 83.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59802515 - NM_032043 BRIP1 0 . . . 1.64 59.28 34 5.63 Yes 13 1.91 Yes 0 0 No -33 0.43 No 45 92.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69082248 + NM_133509 RAD51B 0 . . . 6.02 80.12 19 4.69 No 8 1.11 Yes 0 0 No -18 0.68 Yes 50 91.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47728805 + NM_000251 MSH2 0 . . . 5.62 87.71 14 4.24 No 8 0.18 No 0 0 No -13 0.74 Yes 50 78.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37044599 + NM_000249 MLH1 0 . . . 2.91 77.6 15 4.52 No 35 1.41 Yes 0 0 No -22 0.81 Yes 47 73.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68794914 + NM_133509 RAD51B 0 . . . 1.18 83.78 20 5 No 66 -5.61 No 0 0 No -47 0.92 Yes 63 27.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47641835 + NM_000251 MSH2 0 . . . 0.92 68.06 20 5.92 Yes 4 2.25 Yes 0 0 No -35 0.48 No 43 87.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23622377 - NM_024675 PALB2 0 . . . 6.04 72.99 15 4.04 No 8 1.2 Yes 0 0 No -23 0.9 Yes 50 94.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48024334 + NM_000179 MSH6 0 . . . 0.14 0 19 4.42 No 76 0.58 No 0 0 No -18 0.28 No 45 68.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68317869 + NM_133509 RAD51B 0 . . . 5.51 80.29 63 7.18 Yes -4 -0.33 No 0 0 No -33 0.39 No 45 32.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131975808 + NM_005732 RAD50 0 . . . 7.86 90.85 24 5.29 No 17 0.55 No 0 0 No -21 0.75 Yes 41 91.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68791010 + NM_133509 RAD51B 0 . . . 3.24 73.05 22 4.8 No 55 -3.27 No 0 0 No -21 0.72 Yes 33 77.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32943974 + NM_000059 BRCA2 0 . . . 3.39 68.34 12 4.69 No 23 1.39 Yes 0 0 No -23 0.29 No 45 75.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68520153 + NM_133509 RAD51B 0 . . . 4.09 65.78 51 4.8 No 36 -1.38 No 0 0 No -33 0.39 No 49 50.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40999321 + NM_001164269 RAD51 0 . . . 1.33 0 26 5.1 No 47 0.98 Yes 0 0 No -26 0.57 No 48 46.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21991831 - NM_000077 CDKN2A 0 . . . 4.5 74.93 14 4.47 No 21 0.42 No 0 0 No -37 0.72 Yes 37 43.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47646051 + NM_000251 MSH2 0 . . . 1.93 65.55 14 4.39 No -1 0.85 Yes 0 0 No -25 0.54 No 37 45.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56801647 + NM_058216 RAD51C 0 . . . 3.49 69.29 41 7.48 Yes 59 1.25 Yes 0 0 No -31 0.52 No 38 43.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105185876 + NM_021930 RINT1 0 . . . 0.61 0 26 5.65 Yes 64 -4.39 No 0 0 No -25 0.71 Yes 45 45.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59796594 - NM_032043 BRIP1 0 . . . 4.33 72.88 22 4.8 No 58 0.53 No 0 0 No -21 0.7 Yes 33 69.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152346767 - NM_005431 XRCC2 0 . . . 1.78 73.12 24 6.08 Yes 29 -4.56 No 0 0 No -23 0.78 Yes 52 56.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190718424 + NM_000534 PMS1 0 . . . 5.46 82.76 32 5.57 Yes 5 1.22 Yes 0 0 No -24 0.85 Yes 53 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23625498 - NM_024675 PALB2 0 . . . 2.93 67.78 66 7.44 Yes 69 1.1 Yes 0 0 No -27 0.85 Yes 44 63.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68903957 + NM_133509 RAD51B 0 . . . 0.98 79.1 22 5 No 31 1.03 Yes 0 0 No -21 0.32 No 46 94.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108178229 + NM_000051 ATM 0 . . . 2.07 71.99 50 8.19 Yes 25 0.3 No 0 0 No -28 0.56 No 21 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47779548 + NM_000251 MSH2 0 . . . 6.12 84.75 14 4.47 No 24 1.3 Yes 0 0 No -44 0.59 No 44 93.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94179328 - NM_005591 MRE11 0 . . . 7.33 73.83 60 8.63 Yes 23 0.96 Yes 0 0 No -43 0.79 Yes 45 76.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68586355 + NM_133509 RAD51B 0 . . . 5.54 73.92 23 5.55 No 21 0.73 No 0 0 No -22 0.8 Yes 31 52.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75497580 - NM_001040108 MLH3 0 . . . 2.13 68.26 20 7.14 Yes 63 -5.25 No 0 0 No -19 0.68 Yes 59 46.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47658836 + NM_000251 MSH2 0 . . . 1.02 80.21 39 7.54 Yes 72 0.29 No 0 0 No -25 0.5 No 40 29.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68779260 + NM_133509 RAD51B 0 . . . 5.21 72.3 30 6.82 Yes 54 1.67 Yes 0 0 No -29 0.58 No 44 72.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68785314 + NM_004360 CDH1 0 . . . 5.41 76.35 19 5 No 12 1.46 Yes 0 0 No -18 0.44 No 46 87.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810443 + NM_004360 CDH1 0 . . . 5.57 84.02 33 4.56 No 32 0.46 No 0 0 No -32 0.82 Yes 48 90.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68538672 + NM_133509 RAD51B 0 . . . 6.14 85.58 25 4.73 No 40 0.43 No 0 0 No -24 0.52 No 40 58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94198828 - NM_005591 MRE11 0 . . . 0.09 74.68 39 4.67 No 4 0.41 No 0 0 No -34 0.34 No 54 89.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105176790 + NM_021930 RINT1 0 . . . 2.24 80.12 38 8.36 Yes 7 1.16 Yes 0 0 No -37 0.85 Yes 51 87.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68878100 + NM_133509 RAD51B 0 . . . 0.33 66.75 23 5.39 No 63 -4.37 No 28 0.84 Yes -60 0.61 No 37 68.48 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 215645901 - NM_000465 BARD1 0 . . . 1.59 73.31 29 5.48 No -3 0.12 No 0 0 No -28 0.95 Yes 46 18.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108239129 + NM_000051 ATM 0 . . . 1.62 67.64 17 6.86 Yes 52 -3.56 No 0 0 No -16 0.44 No 48 60.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21976214 - NM_000077 CDKN2A 0 . . . 3.6 85.02 31 4.2 No 4 1.05 Yes 0 0 No -28 0.41 No 54 64.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7580930 - NM_000546 TP53 0 . . . 2.7 61.18 34 7.09 Yes 75 -6.47 No 0 0 No -33 0.76 Yes 54 41.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68794513 + NM_004360 CDH1 0 . . . 4.52 74.04 15 4.58 No 64 0.35 No 0 0 No -21 0.5 No 54 57.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68818326 + NM_004360 CDH1 0 . . . 0.91 0 27 5.29 No 18 1.22 Yes 0 0 No -26 0.7 Yes 40 90.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48005488 + NM_000179 MSH6 0 . . . 5.24 63.99 45 6.63 Yes 11 1.02 Yes 0 0 No -30 0.64 No 44 88.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152358533 - NM_005431 XRCC2 0 . . . 9.78 79.87 103 10.01 Yes 75 0.83 Yes 0 0 No -22 0.56 No 43 70.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6011416 - NM_000535 PMS2 0 . . . 2.75 68.34 24 4.76 No 23 1.17 Yes 0 0 No -23 0.89 Yes 45 46.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21988535 - NM_000077 CDKN2A 0 . . . 4.49 82.16 16 3.9 No 70 1.56 Yes 0 0 No -21 0.76 Yes 40 60.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215660605 - NM_000465 BARD1 0 . . . 6.77 83.65 20 5.09 No 47 -3.01 No 0 0 No -26 0.57 No 47 35.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152355409 - NM_005431 XRCC2 0 . . . 3.83 64.36 38 5.7 Yes 12 0.62 No 0 0 No -37 0.73 Yes 46 45.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41264528 - NM_007294 BRCA1 0 . . . 3.7 84.03 87 9.17 Yes 31 0.6 No 0 0 No -28 0.82 Yes 51 63.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108177033 + NM_000051 ATM 0 . . . 8.22 80.8 21 5 No 39 -0.86 No 0 0 No -20 0.92 Yes 53 67.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108205737 + NM_000051 ATM 0 . . . 1.57 73.73 19 5 No 63 1.87 Yes 0 0 No -18 0.53 No 47 27.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47653165 + NM_000251 MSH2 0 . . . 4.02 80.12 23 4.8 No 12 1.52 Yes 0 0 No -34 0.39 No 46 91.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59865714 - NM_032043 BRIP1 0 . . . 2.73 64.78 21 6.16 Yes 63 0.25 No 0 0 No -21 0.8 Yes 40 65.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215644328 - NM_000465 BARD1 0 . . . 2.42 0 29 5.48 No 52 -4.61 No 0 0 No -28 0.5 No 50 35.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68547685 + NM_133509 RAD51B 0 . . . 2.68 65.38 44 7.94 Yes 56 0.74 No 0 0 No -24 0.72 Yes 51 68.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68480095 + NM_133509 RAD51B 0 . . . 3.01 0 21 5.61 Yes 44 0.02 No 0 0 No -20 0.36 No 53 57.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68794376 + NM_004360 CDH1 0 . . . 2.99 73.17 17 3.79 No 42 0.73 No 0 0 No -22 0.67 Yes 40 37.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23632227 - NM_024675 PALB2 0 . . . 4.23 80.64 40 4.58 No 8 1.2 Yes 0 0 No -39 0.38 No 50 87.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6047970 - NM_000535 PMS2 0 . . . 0.4 66.09 23 6.68 Yes 14 -2.87 No 0 0 No -22 0.77 Yes 19 36.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41209049 - NM_007294 BRCA1 0 . . . 1.78 72.29 18 8.46 Yes 5 0.43 No 0 0 No -26 0.36 No 54 27.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68310707 + NM_133509 RAD51B 0 . . . 4.95 76.51 30 5.41 No 24 -2.97 No 0 0 No -29 0.33 No 44 65.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68787154 + NM_004360 CDH1 0 . . . 0.38 75.26 33 8.36 Yes 27 -2.39 No 0 0 No -27 0.44 No 53 47.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47673199 + NM_000251 MSH2 0 . . . 2.08 83.95 23 4.79 No 19 0.53 No 0 0 No -22 0.89 Yes 39 83.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1227315 + NM_000455 STK11 0 . . . 3.28 0 34 6.66 Yes 20 0.99 Yes 0 0 No -32 0.28 No 54 48.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68483535 + NM_133509 RAD51B 0 . . . 0.3 73.02 27 4.25 No -1 0.95 Yes 0 0 No -26 0.59 No 49 52.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190706359 + NM_000534 PMS1 0 . . . 6.63 72.11 24 3.78 No 41 0.81 Yes 0 0 No -23 0.82 Yes 34 43.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90987070 - NM_002485 NBN 0 . . . 4.68 72.88 20 4.9 No 56 -3.02 No 0 0 No -20 0.82 Yes 50 79.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94216096 - NM_005591 MRE11 0 . . . 1.67 81.05 30 9.04 Yes 32 0.8 Yes 0 0 No -29 0.79 Yes 44 49.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152358008 - NM_005431 XRCC2 0 . . . 2.23 70.85 39 5.92 Yes 18 0.57 No 0 0 No -38 0.65 No 40 66.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68600529 + NM_133509 RAD51B 0 . . . 2.68 75.22 43 4.99 No 22 0.71 No 0 0 No -32 0.69 Yes 49 47.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47751825 + NM_000251 MSH2 0 . . . 1.59 56.73 22 5.84 Yes 1 0.61 No 0 0 No -22 0.64 No 57 42.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94187940 - NM_005591 MRE11 0 . . . 3.66 76.53 27 4.57 No 54 1.64 Yes 0 0 No -26 0.45 No 52 58.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47796049 + NM_000251 MSH2 0 . . . 8.89 86.05 27 5.56 Yes 60 -2.92 No 0 0 No -33 0.72 Yes 41 57.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59851838 - NM_032043 BRIP1 0 . . . 5.4 75.36 33 4.69 No 48 -2.61 No 0 0 No -28 0.8 Yes 44 80.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21992578 - NM_000077 CDKN2A 0 . . . 3.95 64.58 18 5.48 No 39 0.12 No 0 0 No -24 0.53 No 48 42.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69114579 + NM_133509 RAD51B 0 . . . 1.87 80.12 19 5 No 6 1.13 Yes 0 0 No -18 0.76 Yes 52 67.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47792382 + NM_000251 MSH2 0 . . . 8.44 88.23 29 5.01 No 4 0.75 No 0 0 No -29 0.61 No 51 63.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68415322 + NM_133509 RAD51B 0 . . . 4.21 68.67 34 4.04 No 45 0.94 Yes 0 0 No -23 0.79 Yes 39 60.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68404247 + NM_133509 RAD51B 0 . . . 11.72 90.28 22 6.04 Yes 27 0.39 No 0 0 No -22 0.41 No 45 81.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21973803 - NM_000077 CDKN2A 0 . . . 7.55 84.42 27 5.74 Yes 24 -2.25 No 0 0 No -26 0.66 No 39 44.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32934086 + NM_000059 BRCA2 0 . . . 0.76 73.05 21 4.66 No 10 -1.3 No 0 0 No -20 0.68 Yes 45 89.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131960134 + NM_005732 RAD50 0 . . . 7.37 84.58 28 5.29 No 29 1.21 Yes 0 0 No -46 0.33 No 47 88.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68587367 + NM_133509 RAD51B 0 . . . 5.86 84.58 57 5.51 No 45 -1.52 No 0 0 No -31 0.37 No 48 93.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90989644 - NM_002485 NBN 0 . . . 1.2 67.82 13 5.29 No 48 -1.21 No 0 0 No -21 0.68 Yes 39 46.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47654972 + NM_000251 MSH2 0 . . . 2.87 82.17 17 4.36 No 73 0.27 No 0 0 No -20 0.66 No 46 92.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32948142 + NM_000059 BRCA2 0 . . . 9.87 82.45 23 4.24 No 14 1.14 Yes 0 0 No -32 0.69 Yes 44 82.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68441241 + NM_133509 RAD51B 0 . . . 0.71 62.13 34 5.24 No 65 0.53 No 0 0 No -21 0.57 No 53 48.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1224865 + NM_000455 STK11 0 . . . 6.22 79.43 28 5.66 Yes 14 0.24 No 0 0 No -28 0.59 No 44 93.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68406248 + NM_133509 RAD51B 0 . . . 2.87 80.71 15 4.58 No 44 -5.07 No 0 0 No -32 0.84 Yes 48 64.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152365172 - NM_005431 XRCC2 0 . . . 0.17 65.32 24 6.02 Yes 43 -4.56 No 0 0 No -23 0.92 Yes 16 19.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56786615 + NM_058216 RAD51C 0 . . . 3.47 75.88 41 6.7 Yes -2 1.1 Yes 0 0 No -40 0.52 No 46 55.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69057010 + NM_133509 RAD51B 0 . . . 1.27 77.77 46 6.12 Yes 38 -1.26 No 0 0 No -26 0.71 Yes 34 83.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94221415 - NM_005591 MRE11 0 . . . 8.32 84.95 21 5.83 Yes 54 0.6 No 0 0 No -20 0.53 No 45 57.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68911338 + NM_133509 RAD51B 0 . . . 1.99 70.18 12 4.84 No 66 -4.79 No 0 0 No -40 0.37 No 52 37.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89643559 + NM_000314 PTEN 0 . . . 3.75 87.53 25 5.19 No 53 0.25 No 0 0 No -24 0.91 Yes 41 22.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89625931 + NM_000314 PTEN 0 . . . 0.08 0 23 4.79 No 47 0.23 No 0 0 No -22 0.8 Yes 38 79.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68785791 + NM_004360 CDH1 0 . . . 3.83 72.91 31 5.4 No 11 1.38 Yes 0 0 No -30 0.78 Yes 47 85.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33445115 - NM_002878 RAD51D 0 . . . 0.06 64.11 25 4.55 No 69 -4.52 No 0 0 No -24 0.89 Yes 46 38.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48011785 + NM_000179 MSH6 0 . . . 1.77 80.12 19 4.8 No 55 -1.55 No 0 0 No -35 0.41 No 41 67.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215656111 - NM_000465 BARD1 0 . . . 2.1 62.46 23 5.38 No 37 -2.19 No 0 0 No -22 0.64 No 46 52.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131960459 + NM_005732 RAD50 0 . . . 0.17 63.97 13 4.36 No 73 -2.47 No 0 0 No -41 0.65 No 38 36.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215628980 - NM_000465 BARD1 0 . . . 0.32 0 28 5.2 No 76 1.17 Yes 0 0 No -27 0.52 No 55 33.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47631493 + NM_000251 MSH2 0 . . . 4.04 79.22 30 6.57 Yes 75 0.89 Yes 0 0 No -29 0.59 No 44 42.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47760244 + NM_000251 MSH2 0 . . . 5.99 86.2 24 4.95 No 52 1.44 Yes 0 0 No -30 0.46 No 49 88.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90951970 - NM_002485 NBN 0 . . . 3.8 82.53 33 5.68 Yes 75 0.79 Yes 0 0 No -32 0.44 No 48 67.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84407171 - NM_139076 FAM175A 0 . . . 1.33 0 10 4.69 No 26 0.83 Yes 0 0 No -43 0.46 No 32 49.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33433405 - NM_002878 RAD51D 0 . . . 3.06 81.08 34 7.52 Yes 44 -3.09 No 0 0 No -33 0.66 No 51 35.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37033595 + NM_000249 MLH1 0 . . . 6.73 77.65 21 5.04 No 13 1.82 Yes 0 0 No -45 0.61 No 45 79.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152356624 - NM_005431 XRCC2 0 . . . 5.75 88 21 5.74 Yes 9 0.66 No 0 0 No -28 0.53 No 39 94.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215600440 - NM_000465 BARD1 0 . . . 0.86 62.14 24 5.48 No 68 2.12 Yes 0 0 No -29 0.52 No 41 66.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108199092 + NM_000051 ATM 0 . . . 1.77 84.22 22 5.1 No 33 1.14 Yes 0 0 No -21 0.8 Yes 25 44.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68445744 + NM_133509 RAD51B 0 . . . 1.8 64.22 25 6.08 Yes 66 -1.19 No 0 0 No -30 0.47 No 41 48.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666505 - NM_000465 BARD1 0 . . . 7.73 79.1 25 4.92 No 39 -1.5 No 0 0 No -24 0.74 Yes 46 64.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21974409 - NM_000077 CDKN2A 0 . . . 0.66 72.19 47 9.01 Yes 56 -3.73 No 0 0 No -33 0.83 Yes 46 61.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47727974 + NM_000251 MSH2 0 . . . 0.73 0 14 5.37 No 52 1.43 Yes 0 0 No -27 0.51 No 13 58.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69080021 + NM_133509 RAD51B 0 . . . 0.86 74.68 21 5.2 No 8 1.52 Yes 0 0 No -20 0.65 No 54 65.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59887952 - NM_032043 BRIP1 0 . . . 0.45 0 51 5.46 No 58 0.32 No 0 0 No -37 0.49 No 44 83.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68559143 + NM_133509 RAD51B 0 . . . 3.93 63.12 21 5 No 14 -1.69 No 0 0 No -20 0.64 No 44 70.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41196742 - NM_007294 BRCA1 0 . . . 1.55 73.15 25 3.81 No 33 0.38 No 0 0 No -24 0.75 Yes 47 62.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190708118 + NM_000534 PMS1 0 . . . 7.93 94.82 36 5.97 Yes 12 0.73 No 0 0 No -43 0.49 No 46 81.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131966182 + NM_005732 RAD50 0 . . . 1.96 0 15 5.38 No 6 -2.1 No 0 0 No -27 0.65 No 52 37.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37040625 + NM_000249 MLH1 0 . . . 6.79 73.02 23 4.51 No 50 1.01 Yes 0 0 No -22 0.57 No 42 80.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68459930 + NM_133509 RAD51B 0 . . . 3.92 72.37 32 5.23 No 60 -2.84 No 0 0 No -16 0.4 No 45 75.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69006081 + NM_133509 RAD51B 0 . . . 8.75 83.78 22 4.79 No 33 0.84 Yes 0 0 No -21 0.52 No 50 80.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6019958 - NM_000535 PMS2 0 . . . 6.01 79.9 32 4.38 No 65 -3.2 No 0 0 No -31 0.91 Yes 49 34.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68633589 + NM_133509 RAD51B 0 . . . 5.23 70.9 14 4.99 No 36 0.95 Yes 0 0 No -46 0.72 Yes 39 54.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94209433 - NM_005591 MRE11 0 . . . 2.53 69.86 17 6.92 Yes 35 0.86 Yes 0 0 No -29 0.68 Yes 46 36.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68777123 + NM_004360 CDH1 0 . . . 5.51 84.87 25 5.44 No 63 1.84 Yes 0 0 No -28 0.75 Yes 51 80.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68807306 + NM_133509 RAD51B 0 . . . 6.26 87.38 21 4.47 No 14 1.39 Yes 0 0 No -20 0.9 Yes 44 91.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59789335 - NM_032043 BRIP1 0 . . . 0.23 0 20 7.09 Yes 50 -2.11 No 0 0 No -19 0.73 Yes 40 51.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33437979 - NM_002878 RAD51D 0 . . . 0.77 68.84 22 5 No 43 1.18 Yes 0 0 No -57 0.53 No 48 63.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215626654 - NM_000465 BARD1 0 . . . 2.68 71.3 29 4.17 No -3 0.24 No 0 0 No -23 0.62 No 49 35.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190712364 + NM_000534 PMS1 0 . . . 7.31 91.88 12 5.27 No 29 0.59 No 0 0 No -26 0.8 Yes 50 60.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152353349 - NM_005431 XRCC2 0 . . . 1.02 80.49 34 7.72 Yes 69 -1.81 No 0 0 No -33 0.68 Yes 39 41.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68635403 + NM_133509 RAD51B 0 . . . 1.82 63.65 23 5.82 Yes 41 1.11 Yes 0 0 No -22 0.76 Yes 44 79.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90958113 - NM_002485 NBN 0 . . . 5.55 84.24 24 4.16 No 13 0.64 No 0 0 No -23 0.8 Yes 45 80.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33446969 - NM_002878 RAD51D 0 . . . 1.29 71.9 13 5.47 No 26 -1.81 No 0 0 No -59 0.33 No 59 15.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68537177 + NM_133509 RAD51B 0 . . . 2.68 79.37 16 4.26 No 25 0.14 No 0 0 No -22 0.32 No 45 71.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47805439 + NM_000251 MSH2 0 . . . 6.71 78.54 18 5.48 No 2 1.46 Yes 0 0 No -20 0.57 No 48 92.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75497121 - NM_001040108 MLH3 0 . . . 5.03 75.45 22 3.99 No 68 1.93 Yes 0 0 No -21 0.78 Yes 45 94.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6048135 - NM_000535 PMS2 0 . . . 3.18 70.93 25 5.57 Yes 23 0.66 No 0 0 No -24 0.83 Yes 40 77.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69069903 + NM_133509 RAD51B 0 . . . 2.15 70.54 14 5.57 Yes 39 0.41 No 0 0 No -28 0.3 No 47 36.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68811527 + NM_004360 CDH1 0 . . . 1 75.78 83 7.12 Yes 41 1.28 Yes 0 0 No -27 0.74 Yes 52 54.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68945394 + NM_133509 RAD51B 0 . . . 4.97 79.54 34 5.92 Yes 34 1.56 Yes 0 0 No -33 0.39 No 49 90.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59824069 - NM_032043 BRIP1 0 . . . 9.67 89.66 41 6.85 Yes 31 0.88 Yes 0 0 No -40 0.61 No 44 91.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68791716 + NM_004360 CDH1 0 . . . 2.94 83.28 28 5.45 No NA NA NA 0 0 No -28 0.6 No 40 13.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68873073 + NM_133509 RAD51B 0 . . . 0.45 73.2 18 4.21 No 66 -4.45 No 0 0 No -24 0.78 Yes 47 60.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68867019 + NM_133509 RAD51B 0 . . . 2.12 77.01 17 5.77 Yes 16 -2.08 No 0 0 No -25 0.4 No 47 90.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68397756 + NM_133509 RAD51B 0 . . . 4.71 84.22 21 5.2 No 8 1.06 Yes 0 0 No -20 0.6 No 50 74.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215672481 - NM_000465 BARD1 0 . . . 0.71 66.67 14 5.53 No 21 0.44 No 0 0 No -21 0.55 No 49 34.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190688586 + NM_000534 PMS1 0 . . . 1.19 64.95 27 5.2 No 51 0.54 No 0 0 No -26 0.78 Yes 42 77.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32943895 + NM_000059 BRCA2 0 . . . 4.83 79.44 21 4.56 No 16 1.22 Yes 0 0 No -31 0.69 Yes 42 95.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68416903 + NM_133509 RAD51B 0 . . . 5.65 87.32 23 5.67 Yes 3 2 Yes 0 0 No -28 0.4 No 47 36.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59934626 - NM_032043 BRIP1 0 . . . 4.01 75 16 4.65 No 4 1.08 Yes 24 0.64 Yes -44 0.69 Yes 50 72.05 Yes BPP: No, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr11 108182935 + NM_000051 ATM 0 . . . 5.44 77.37 17 5.34 No 22 0.33 No 0 0 No -23 0.76 Yes 29 61.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68376250 + NM_133509 RAD51B 0 . . . 8.23 80.07 30 5.81 Yes 50 1.26 Yes 0 0 No -29 0.7 Yes 48 53.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6050127 - NM_000535 PMS2 0 . . . 0.94 76.63 30 6.26 Yes 66 -4.89 No 0 0 No -30 0.54 No 48 69.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152345155 - NM_005431 XRCC2 0 . . . 0.57 68.05 15 3.38 No 24 0.81 Yes 0 0 No -36 0.37 No 47 88.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68540984 + NM_133509 RAD51B 0 . . . 0.21 0 25 5 No 28 0.36 No 0 0 No -22 0.38 No 30 70.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59784186 - NM_032043 BRIP1 0 . . . 0.15 76.14 61 6.98 Yes 46 0.17 No 0 0 No -29 0.37 No 35 75.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215671293 - NM_000465 BARD1 0 . . . 5.18 74.43 17 4.43 No 72 0.77 Yes 0 0 No -20 0.47 No 50 91.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68695396 + NM_133509 RAD51B 0 . . . 2.46 66.98 30 4.78 No 54 0.12 No 0 0 No -29 0.61 No 53 68.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152346950 - NM_005431 XRCC2 0 . . . 0.9 68.45 19 4.23 No 55 0.53 No 0 0 No -26 0.64 No 59 23.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68630477 + NM_133509 RAD51B 0 . . . 0.48 0 29 5.73 Yes 36 1.33 Yes 0 0 No -24 0.73 Yes 46 38.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7591530 - NM_000546 TP53 0 . . . 3.5 69.56 28 5.45 No 53 1.36 Yes 0 0 No -27 0.83 Yes 58 49.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59807309 - NM_032043 BRIP1 0 . . . 0.94 84.96 40 6.56 Yes 3 0.93 Yes 0 0 No -39 0.49 No 38 61.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94208314 - NM_005591 MRE11 0 . . . 1.27 77.53 32 5.82 Yes 35 0.73 No 0 0 No -54 0.43 No 47 26.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131959302 + NM_005732 RAD50 0 . . . 1.37 79.03 20 4.55 No 54 2.07 Yes 0 0 No -20 0.6 No 44 68.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59861905 - NM_032043 BRIP1 0 . . . 1.03 68.56 20 5.85 Yes 61 1.11 Yes 0 0 No -31 0.32 No 23 26.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108201437 + NM_000051 ATM 0 . . . 9.14 87.87 34 5.92 Yes 41 0.48 No 0 0 No -31 0.68 Yes 47 89.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68617444 + NM_133509 RAD51B 0 . . . 4.59 77.9 43 4.87 No 58 1.97 Yes 0 0 No -33 0.63 No 48 71.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104173420 - NM_001100119 XRCC3 0 . . . 0.27 66.49 25 5.2 No 4 0.08 No 0 0 No -28 0.73 Yes 54 35.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59922630 - NM_032043 BRIP1 0 . . . 2.58 0 22 4.34 No 46 1.72 Yes 0 0 No -21 0.82 Yes 12 56.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59773139 - NM_032043 BRIP1 0 . . . 4.9 83.4 18 4.86 No 8 1.26 Yes 0 0 No -37 0.57 No 39 66.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89722546 + NM_000314 PTEN 0 . . . 4.07 68.32 26 4.08 No 25 0.58 No 0 0 No -25 0.57 No 57 30.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89684021 + NM_000314 PTEN 0 . . . 1.78 74.52 29 5.89 Yes 30 0.93 Yes 0 0 No -28 0.79 Yes 49 78.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131893410 + NM_005732 RAD50 0 . . . 3.13 74.42 23 4.65 No 27 -1.76 No 0 0 No -22 0.8 Yes 50 41.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29097528 - NM_001005735 CHEK2 0 . . . 3.92 88.88 25 5.52 No 61 0.43 No 0 0 No -28 0.7 Yes 53 54.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108127800 + NM_000051 ATM 0 . . . 1.75 0 39 3.9 No 48 0.6 No 0 0 No -23 0.86 Yes 46 47.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108145801 + NM_000051 ATM 0 . . . 5.14 71.99 15 5.44 No 59 1.03 Yes 0 0 No -46 0.3 No 29 41.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47798924 + NM_000251 MSH2 0 . . . 2.38 73.77 20 7.13 Yes 69 -5.44 No 0 0 No -19 0.66 No 43 55.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89705293 + NM_000314 PTEN 0 . . . 0.55 79.5 31 5.41 No -1 0.27 No 0 0 No -26 0.74 Yes 50 27.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32903382 + NM_000059 BRCA2 0 . . . 0.57 64.56 33 5.33 No 63 1.56 Yes 0 0 No -32 0.69 Yes 39 68.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47689975 + NM_000251 MSH2 0 . . . 4.84 81.24 29 5.29 No 21 1.49 Yes 0 0 No -21 0.43 No 45 46.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68354045 + NM_133509 RAD51B 0 . . . 1.22 78.82 19 5.74 Yes -1 0.59 No 0 0 No -18 0.84 Yes 50 46.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215625054 - NM_000465 BARD1 0 . . . 3.45 69.48 26 6.07 Yes 47 0.63 No 0 0 No -25 0.58 No 42 59.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89675360 + NM_000314 PTEN 0 . . . 9.31 86.14 35 8.36 Yes -3 0.85 Yes 0 0 No -47 0.7 Yes 44 85.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89694053 + NM_000314 PTEN 0 . . . 6.18 88.26 70 6.44 Yes 10 1.17 Yes 0 0 No -25 0.62 No 42 69.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131942346 + NM_005732 RAD50 0 . . . 0.03 67.6 29 5.48 No 34 2.11 Yes 0 0 No -28 0.53 No 47 25.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68597088 + NM_133509 RAD51B 0 . . . 6.42 75.78 21 5.04 No 17 0.67 No 0 0 No -20 0.6 No 40 87.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89684412 + NM_000314 PTEN 0 . . . 1 0 42 5.91 Yes 8 1.35 Yes 0 0 No -34 0.73 Yes 50 42.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68792635 + NM_133509 RAD51B 0 . . . 1.57 0 28 5.38 No 76 2.12 Yes 0 0 No -28 0.68 Yes 50 79.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7588250 - NM_000546 TP53 0 . . . 0.67 81.23 23 4.69 No 35 0.46 No 0 0 No -22 0.86 Yes 42 67.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190658940 + NM_000534 PMS1 0 . . . 4.2 70.15 25 5.29 No 10 1.85 Yes 0 0 No -24 0.78 Yes 42 89.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41224719 - NM_007294 BRCA1 0 . . . 3.48 75.44 23 5.74 Yes 58 0.83 Yes 0 0 No -26 0.86 Yes 43 58.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84399273 - NM_139076 FAM175A 0 . . . 0.53 58.81 34 6.5 Yes -1 0.48 No 0 0 No -33 0.84 Yes 30 46.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56799508 + NM_058216 RAD51C 0 . . . 3.21 83.82 15 5.74 Yes 5 0.29 No 0 0 No -45 0.29 No 43 38.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7573729 - NM_000546 TP53 0 . . . 5.37 0 15 3.97 No 17 1.03 Yes 0 0 No -18 0.92 Yes 40 62.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33431125 - NM_002878 RAD51D 0 . . . 2.3 70 22 4.6 No 56 -3.62 No 0 0 No -40 0.61 No 48 68.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47764189 + NM_000251 MSH2 0 . . . 5.56 84.48 60 7.66 Yes 25 1.54 Yes 0 0 No -28 0.72 Yes 14 35.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69053769 + NM_133509 RAD51B 0 . . . 4.44 86.88 67 6.94 Yes 67 -1.83 No 0 0 No -29 0.62 No 42 91.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68740974 + NM_133509 RAD51B 0 . . . 3.24 71.67 22 4.51 No 57 1.51 Yes 0 0 No -30 0.81 Yes 24 87.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68424074 + NM_133509 RAD51B 0 . . . 5.27 84.72 36 5.73 Yes 6 0.63 No 0 0 No -25 0.49 No 45 65.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68844232 + NM_004360 CDH1 0 . . . 0.93 73.02 12 5.09 No 61 -4.41 No 0 0 No -40 0.56 No 43 55.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29123076 - NM_001005735 CHEK2 0 . . . 1.24 74.14 77 7.47 Yes 58 -3.88 No 0 0 No -31 0.41 No 43 34.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41232283 - NM_007294 BRCA1 0 . . . 8.45 88.44 38 5.85 Yes 56 1.11 Yes 0 0 No -37 0.93 Yes 44 71.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47679540 + NM_000251 MSH2 0 . . . 4.42 78.97 14 4.47 No 8 1.06 Yes 0 0 No -30 0.34 No 50 79.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59856868 - NM_032043 BRIP1 0 . . . 1.96 65.49 17 6.47 Yes 45 1.13 Yes 0 0 No -16 0.7 Yes 39 56.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47701229 + NM_000251 MSH2 0 . . . 0.48 0 14 4.47 No 20 0.94 Yes 0 0 No -23 0.8 Yes 31 58.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68521722 + NM_133509 RAD51B 0 . . . 3.47 78.91 24 5.26 No 45 0.15 No 0 0 No -23 0.65 No 54 15.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47773433 + NM_000251 MSH2 0 . . . 2.97 77.24 14 4.47 No 50 1.19 Yes 0 0 No -19 0.3 No 31 56.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68833516 + NM_004360 CDH1 0 . . . 1.8 74.58 21 4.4 No 60 0.26 No 0 0 No -21 0.66 No 51 68.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190721163 + NM_000534 PMS1 0 . . . 6.79 83.97 32 5.61 Yes 0 0.9 Yes 0 0 No -31 0.74 Yes 43 51.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68334173 + NM_133509 RAD51B 0 . . . 0.71 0 35 6.22 Yes 6 0.46 No 0 0 No -34 0.62 No 39 49.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68669049 + NM_133509 RAD51B 0 . . . 0.88 70.33 21 5.1 No 24 -2.14 No 0 0 No -19 0.89 Yes 47 53.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32889964 + NM_000059 BRCA2 0 . . . 1.56 77.72 35 7.48 Yes 73 0.62 No 0 0 No -34 0.8 Yes 48 19.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89703473 + NM_000314 PTEN 0 . . . 2.79 67.97 22 4.89 No 73 0.28 No 0 0 No -21 0.44 No 43 39.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68399188 + NM_133509 RAD51B 0 . . . 7.08 79.95 36 6.17 Yes 5 1.09 Yes 0 0 No -28 0.56 No 53 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7577453 - NM_000546 TP53 0 . . . 4.99 77.52 13 4.36 No 54 -1.71 No 0 0 No -36 0.4 No 48 73.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68837101 + NM_133509 RAD51B 0 . . . 3.79 74.78 15 3.85 No 37 1.21 Yes 0 0 No -27 0.52 No 44 67.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215645596 - NM_000465 BARD1 0 . . . 3.37 72.18 14 5.05 No 59 0.09 No 0 0 No -26 0.92 Yes 41 63.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47749146 + NM_000251 MSH2 0 . . . 4.54 79.45 29 5.48 No -2 0.54 No 0 0 No -23 0.67 Yes 47 71.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32968276 + NM_000059 BRCA2 0 . . . 10.33 92.16 32 6.71 Yes 3 1.62 Yes 0 0 No -27 0.86 Yes 40 77.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29121448 - NM_001005735 CHEK2 0 . . . 6.7 80.1 23 7.24 Yes 65 1.62 Yes 0 0 No -22 0.64 No 51 51.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190694122 + NM_000534 PMS1 0 . . . 5.84 65.9 27 5.74 Yes 24 1.75 Yes 0 0 No -26 0.7 Yes 34 57.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37071736 + NM_000249 MLH1 0 . . . 8.92 75.52 15 5.56 Yes 40 0.24 No 0 0 No -28 0.74 Yes 42 46.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84402741 - NM_139076 FAM175A 0 . . . 1.94 78.87 28 5.39 No 8 0.01 No 0 0 No -30 0.54 No 39 31.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56802647 + NM_058216 RAD51C 0 . . . 0.25 71.75 30 5.57 Yes 56 1.41 Yes 0 0 No -29 0.48 No 49 67.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29103871 - NM_001005735 CHEK2 0 . . . 2.39 76.63 20 4.97 No 58 -3.88 No 0 0 No -19 0.81 Yes 43 77.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29139466 - NM_001005735 CHEK2 0 . . . 4.08 74.07 17 4.15 No 75 -6 No 0 0 No -24 0.66 No 41 32.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68675053 + NM_133509 RAD51B 0 . . . 1.67 61.89 33 6.78 Yes -4 0.31 No 0 0 No -32 0.79 Yes 29 46.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21984378 - NM_000077 CDKN2A 0 . . . 1.49 71.79 20 5.23 No 36 0.79 Yes 0 0 No -22 0.62 No 22 94.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59815898 - NM_032043 BRIP1 0 . . . 4.81 76.49 23 4.56 No -1 1.75 Yes 0 0 No -22 0.57 No 46 89.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59910134 - NM_032043 BRIP1 0 . . . 3.11 77.69 27 5.56 Yes 35 0.68 No 0 0 No -26 0.7 Yes 47 52.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40987699 + NM_001164269 RAD51 0 . . . 5.29 72.63 24 6 Yes 61 -1.82 No 0 0 No -23 0.42 No 48 60.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108220936 + NM_000051 ATM 0 . . . 3.77 83.43 20 5.62 Yes 40 -3.37 No 0 0 No -25 0.52 No 42 73.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94179102 - NM_005591 MRE11 0 . . . 2.4 52.9 24 6.05 Yes 40 0.55 No 20 0.81 Yes -23 0.37 No 32 66.99 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68805180 + NM_133509 RAD51B 0 . . . 3.24 79.86 11 3.98 No 23 0.65 No 0 0 No -42 0.4 No 32 68.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68491258 + NM_133509 RAD51B 0 . . . 4.72 0 28 5.38 No 53 1.51 Yes 0 0 No -23 0.59 No 15 56.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7570856 - NM_000546 TP53 0 . . . 2.37 0 34 4.98 No 55 -1.81 No 0 0 No -27 0.56 No 61 65.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68866148 + NM_133509 RAD51B 0 . . . 3.76 70.81 19 5 No 64 1.16 Yes 0 0 No -18 0.59 No 49 59.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84402523 - NM_139076 FAM175A 0 . . . 5.07 0 15 5.47 No 11 0.51 No 0 0 No -23 0.4 No 47 77.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1213855 + NM_000455 STK11 0 . . . 4.86 78.92 27 5.2 No 58 -4.83 No 0 0 No -26 0.51 No 35 64.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215615722 - NM_000465 BARD1 0 . . . 1.63 77.54 36 5.6 Yes 63 -4.7 No 0 0 No -25 0.66 No 48 93.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68339659 + NM_133509 RAD51B 0 . . . 1.39 58.69 28 5.29 No 32 0.61 No 0 0 No -49 0.68 Yes 44 86.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68491776 + NM_133509 RAD51B 0 . . . 2.76 78.65 24 5.46 No 9 0.08 No 0 0 No -24 0.43 No 49 56.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131911661 + NM_005732 RAD50 0 . . . 7.77 87.77 24 4.87 No -4 0.4 No 0 0 No -24 0.37 No 39 70.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89723975 + NM_000314 PTEN 0 . . . 0.56 66.27 21 5.91 Yes 62 1.49 Yes 0 0 No -25 0.54 No 39 73.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68795884 + NM_004360 CDH1 0 . . . 9.34 81.38 28 4.62 No 62 0.39 No 0 0 No -27 0.82 Yes 48 82.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89687700 + NM_000314 PTEN 0 . . . 1.62 66.92 17 5.39 No 63 0.02 No 0 0 No -19 0.37 No 46 52.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68707867 + NM_133509 RAD51B 0 . . . 4.42 75.86 21 4.9 No 67 1.2 Yes 0 0 No -21 0.66 No 43 77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69037734 + NM_133509 RAD51B 0 . . . 2.16 68.94 34 8.06 Yes 22 1.27 Yes 0 0 No -33 0.77 Yes 36 58.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41198798 - NM_007294 BRCA1 0 . . . 1.44 76.99 24 4.99 No 74 -2.41 No 0 0 No -23 0.64 No 51 35.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68706905 + NM_133509 RAD51B 0 . . . 3.32 0 22 5.1 No 33 -1.16 No 0 0 No -21 0.92 Yes 41 66.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215657870 - NM_000465 BARD1 0 . . . 3.87 78.99 25 9 Yes 3 0.03 No 0 0 No -24 0.79 Yes 48 77.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190655114 + NM_000534 PMS1 0 . . . 6.94 83.16 27 6.16 Yes 20 0.19 No 0 0 No -26 0.92 Yes 38 61.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29088243 - NM_001005735 CHEK2 0 . . . 10.07 77.05 30 7.84 Yes 43 -2.38 No 0 0 No -29 0.67 Yes 37 81.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68327291 + NM_133509 RAD51B 0 . . . 4.24 68.41 46 6.33 Yes 46 -3.96 No 0 0 No -22 0.82 Yes 52 52.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68569496 + NM_133509 RAD51B 0 . . . 2.23 80.57 23 5.1 No 66 0.11 No 0 0 No -50 0.7 Yes 33 42.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215622454 - NM_000465 BARD1 0 . . . 3.61 80.91 23 4.9 No 15 0.08 No 0 0 No -22 0.42 No 52 40.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402989 + NM_133509 RAD51B 0 . . . 4.23 68.76 15 3.92 No 13 1.8 Yes 0 0 No -22 0.45 No 45 95.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48020997 + NM_000179 MSH6 0 . . . 3.36 71.37 24 5.1 No 42 0.99 Yes 0 0 No -23 0.84 Yes 42 52.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68416817 + NM_133509 RAD51B 0 . . . 1.8 68.83 18 4.01 No 52 -4.91 No 0 0 No -17 0.56 No 51 56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215671974 - NM_000465 BARD1 0 . . . 4.05 83.79 26 5.42 No 4 0.41 No 0 0 No -25 0.79 Yes 47 74.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69060092 + NM_133509 RAD51B 0 . . . 3.09 62.72 14 4.36 No 51 -5.03 No 0 0 No -21 0.73 Yes 45 77.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29131461 - NM_001005735 CHEK2 0 . . . 7.11 84.19 19 4.67 No 1 1.27 Yes 0 0 No -22 0.47 No 46 64.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68757706 + NM_133509 RAD51B 0 . . . 3.79 78.68 17 5.57 Yes 5 1.05 Yes 0 0 No -16 0.66 No 42 74.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47783954 + NM_000251 MSH2 0 . . . 7.93 81.85 28 4.42 No -2 0.61 No 0 0 No -27 0.75 Yes 38 78.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215650631 - NM_000465 BARD1 0 . . . 9.27 83.1 70 10.36 Yes 74 0.42 No 0 0 No -69 0.09 No 11 44.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144970 + NM_133509 RAD51B 0 . . . 3.2 86.33 27 4.43 No 58 1.55 Yes 0 0 No -26 0.73 Yes 50 93.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68766112 + NM_133509 RAD51B 0 . . . 3.42 73.2 19 4.29 No 71 0.12 No 0 0 No -21 0.48 No 45 29.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1217462 + NM_000455 STK11 0 . . . 5.35 74.25 19 5.82 Yes 13 0.86 Yes 0 0 No -18 0.74 Yes 40 85.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68540640 + NM_133509 RAD51B 0 . . . 2.44 72.65 29 8.62 Yes 7 1.32 Yes 0 0 No -28 0.64 No 45 65.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68779025 + NM_133509 RAD51B 0 . . . 1.97 73.07 30 5.57 Yes 62 -1.52 No 0 0 No -29 0.86 Yes 38 83.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48026406 + NM_000179 MSH6 0 . . . 5.95 77.18 22 5.21 No 8 0.76 No 0 0 No -24 0.79 Yes 41 76.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47662086 + NM_000251 MSH2 0 . . . 6.82 80.89 48 8.32 Yes 70 0.03 No 0 0 No -21 0.82 Yes 37 62.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56773862 + NM_058216 RAD51C 0 . . . 6.3 74.46 21 5.92 Yes 24 0.91 Yes 0 0 No -20 0.81 Yes 45 33.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21976630 - NM_000077 CDKN2A 0 . . . 3.87 68.95 16 5.08 No 19 1.19 Yes 0 0 No -20 0.57 No 39 91.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68844844 + NM_133509 RAD51B 0 . . . 6.6 86.92 23 5.39 No 8 1.51 Yes 0 0 No -44 0.81 Yes 46 58.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1229804 + NM_000455 STK11 0 . . . 2.37 77.04 23 5.38 No NA NA NA 0 0 No -22 0.78 Yes 44 53.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68471475 + NM_133509 RAD51B 0 . . . 8.79 82.69 17 6.75 Yes 70 -2.69 No 0 0 No -25 0.3 No 43 51.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497062 + NM_133509 RAD51B 0 . . . 2.32 0 26 4.96 No 52 0.29 No 0 0 No -25 0.49 No 45 87.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37036643 + NM_000249 MLH1 0 . . . 1.63 72.33 26 4.89 No 15 -3.13 No 0 0 No -33 0.67 Yes 44 56.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1221112 + NM_000455 STK11 0 . . . 0.63 73.98 22 6.22 Yes 29 -1.51 No 0 0 No -26 0.63 No 52 30.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47738985 + NM_000251 MSH2 0 . . . 2.5 60.95 21 5 No 26 0.89 Yes 0 0 No -20 0.7 Yes 32 81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68759820 + NM_133509 RAD51B 0 . . . 4.36 75.42 16 4.69 No 49 1.07 Yes 0 0 No -19 0.29 No 37 73.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59836228 - NM_032043 BRIP1 0 . . . 2.77 69.89 27 5.39 No 34 -2.4 No 0 0 No -26 0.43 No 46 65.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68738142 + NM_133509 RAD51B 0 . . . 6.64 78.09 18 5 No 7 0.9 Yes 0 0 No -28 0.52 No 51 95.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59759512 - NM_032043 BRIP1 0 . . . 0.63 68.79 25 5.52 No 53 -4.26 No 0 0 No -25 0.62 No 48 55.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68740332 + NM_133509 RAD51B 0 . . . 2.98 82.74 28 5.07 No 73 -2.84 No 0 0 No -27 0.55 No 50 84.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7576298 - NM_000546 TP53 0 . . . 1.05 67.68 30 5.22 No 34 -0.66 No 0 0 No -18 0.67 Yes 48 61.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68595484 + NM_133509 RAD51B 0 . . . 3.71 68.6 22 4.8 No 76 0.21 No 0 0 No -55 0.9 Yes 47 75.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105183748 + NM_021930 RINT1 0 . . . 8.64 81.95 25 5.1 No 13 0.99 Yes 0 0 No -24 0.83 Yes 45 79.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59836640 - NM_032043 BRIP1 0 . . . 1.94 72.64 62 7.64 Yes 64 1.57 Yes 0 0 No -24 0.6 No 44 79.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94202895 - NM_005591 MRE11 0 . . . 3.55 75.39 30 5.31 No 74 -5.84 No 0 0 No -29 0.36 No 35 81.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6041431 - NM_000535 PMS2 0 . . . 1.75 81.47 25 6.96 Yes 33 1.17 Yes 0 0 No -25 0.51 No 25 31.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190734924 + NM_000534 PMS1 0 . . . 6.83 90.18 30 5.87 Yes 73 1.04 Yes 0 0 No -29 0.5 No 47 76.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89724921 + NM_000314 PTEN 0 . . . 4.48 83.91 12 4.96 No 70 -5.23 No 0 0 No -21 0.41 No 50 84.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68873594 + NM_133509 RAD51B 0 . . . 0.13 62.12 43 6.5 Yes 47 0.86 Yes 0 0 No -29 0.68 Yes 39 72.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69084295 + NM_133509 RAD51B 0 . . . 4.95 82.89 14 7.2 Yes 74 -2.84 No 0 0 No -32 0.72 Yes 36 80.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68425366 + NM_133509 RAD51B 0 . . . 1.64 65.96 18 5.41 No 23 0.4 No 0 0 No -17 0.6 No 29 46.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68433268 + NM_133509 RAD51B 0 . . . 4.45 74.34 22 5.45 No 21 1.97 Yes 0 0 No -21 0.79 Yes 37 78.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32940442 + NM_000059 BRCA2 0 . . . 0.75 65.31 20 5.36 No 21 0.27 No 0 0 No -23 0.93 Yes 51 57.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37064199 + NM_000249 MLH1 0 . . . 7.67 83.67 12 3.88 No 10 0.86 Yes 0 0 No -25 0.52 No 48 93.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69118020 + NM_133509 RAD51B 0 . . . 0.6 62.62 25 5.2 No 9 1.41 Yes 0 0 No -24 0.47 No 12 42.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68675356 + NM_133509 RAD51B 0 . . . 2.1 78.82 20 5.57 Yes 53 -2.65 No 0 0 No -19 0.59 No 53 41.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68286333 + NM_133509 RAD51B 0 . . . 3.2 77.03 30 5.65 Yes 18 0.5 No 0 0 No -29 0.87 Yes 40 95.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59859400 - NM_032043 BRIP1 0 . . . 7.41 84.7 15 4.58 No 70 0.39 No 0 0 No -32 0.61 No 52 80.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68610544 + NM_133509 RAD51B 0 . . . 4.54 72.93 34 7.73 Yes 71 -5.52 No 0 0 No -33 0.68 Yes 48 78.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21966881 - NM_000077 CDKN2A 0 . . . 1.02 0 26 4.35 No 22 1.59 Yes 0 0 No -25 0.6 No 36 81.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68828253 + NM_004360 CDH1 0 . . . 2.7 65.64 24 5.1 No 25 -2.48 No 0 0 No -28 0.82 Yes 46 43.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48022118 + NM_000179 MSH6 0 . . . 2.24 80.12 36 6.23 Yes 7 1.02 Yes 0 0 No -23 0.65 No 51 82.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190723912 + NM_000534 PMS1 0 . . . 5.92 79.58 34 5.52 No 60 0.79 Yes 0 0 No -20 0.6 No 50 70.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41262293 - NM_007294 BRCA1 0 . . . 5.37 78.43 17 6.93 Yes 43 -1.67 No 0 0 No -27 0.48 No 49 82.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108227892 + NM_000051 ATM 0 . . . 2.08 76.67 16 3.92 No 49 0.01 No 0 0 No -22 0.45 No 51 80.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32929567 + NM_000059 BRCA2 0 . . . 3.3 71.67 23 5.03 No 58 1.48 Yes 0 0 No -22 0.43 No 44 85.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84392849 - NM_139076 FAM175A 0 . . . 4.35 79.91 17 4.44 No 6 0.68 No 0 0 No -24 0.54 No 52 74.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68901178 + NM_133509 RAD51B 0 . . . 2.94 81.98 23 5 No 50 0.62 No 0 0 No -22 0.93 Yes 47 70.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69017084 + NM_133509 RAD51B 0 . . . 1.96 78.53 15 5 No 9 0.36 No 0 0 No -34 0.44 No 42 70.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37085453 + NM_000249 MLH1 0 . . . 1.7 0 20 5.61 Yes 32 0.74 No 0 0 No -31 0.71 Yes 38 73.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37047453 + NM_000249 MLH1 0 . . . 5.73 85.01 28 5.37 No 46 1.69 Yes 0 0 No -41 0.41 No 53 73.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41261280 - NM_007294 BRCA1 0 . . . 0.32 74.68 17 5.98 Yes 11 0.63 No 0 0 No -16 0.5 No 47 80.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89729100 + NM_000314 PTEN 0 . . . 0.28 73.38 21 5 No 33 1.19 Yes 0 0 No -20 0.37 No 49 76.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59761353 - NM_032043 BRIP1 0 . . . 0.36 60.52 21 6.34 Yes 26 0.56 No 0 0 No -34 0.65 No 42 22.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23630102 - NM_024675 PALB2 0 . . . 8.73 77.46 20 4.47 No 47 -1.32 No 0 0 No -19 0.37 No 48 60.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94218819 - NM_005591 MRE11 0 . . . 3.56 80.22 16 4.58 No 58 -4.15 No 0 0 No -25 0.37 No 39 59.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47746026 + NM_000251 MSH2 0 . . . 6.93 84.28 19 4.01 No 22 1.34 Yes 0 0 No -60 0.4 No 36 89.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89685790 + NM_000314 PTEN 0 . . . 1.42 0 29 5.29 No 50 0.91 Yes 0 0 No -28 0.67 Yes 41 73.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32933785 + NM_000059 BRCA2 0 . . . 5.07 75.46 32 5.66 Yes 14 0.94 Yes 0 0 No -22 0.37 No 30 34.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59910060 - NM_032043 BRIP1 0 . . . 1.34 0 16 6.32 Yes 51 1.49 Yes 0 0 No -21 0.42 No 52 72.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152364945 - NM_005431 XRCC2 0 . . . 7.16 83.48 9 3.87 No 8 1.1 Yes 0 0 No -22 0.41 No 50 67.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68865124 + NM_004360 CDH1 0 . . . 0.32 0 23 4.75 No 57 0.88 Yes 0 0 No -23 0.44 No 26 54.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68989320 + NM_133509 RAD51B 0 . . . 1.11 66.63 33 5.6 Yes 62 -3.28 No 0 0 No -26 0.44 No 43 38.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37086296 + NM_000249 MLH1 0 . . . 3.82 0 17 4.74 No 51 -2.74 No 0 0 No -26 0.33 No 48 76.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68754039 + NM_133509 RAD51B 0 . . . 0.92 73.6 24 7.05 Yes 36 0.23 No 0 0 No -23 0.86 Yes 48 56.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94160963 - NM_005591 MRE11 0 . . . 7.67 84.21 36 7 Yes 34 1.03 Yes 0 0 No -35 0.9 Yes 42 68.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33435180 - NM_002878 RAD51D 0 . . . 1.76 68.95 28 5.38 No 10 1.78 Yes 0 0 No -27 0.61 No 42 87.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68660852 + NM_133509 RAD51B 0 . . . 0.88 71.89 17 3.94 No 50 0.41 No 0 0 No -20 0.67 Yes 44 58.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68604129 + NM_133509 RAD51B 0 . . . 5.38 84.1 61 8.22 Yes 43 -2.17 No 0 0 No -41 0.45 No 40 52.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68527595 + NM_133509 RAD51B 0 . . . 2.14 59.25 21 4.51 No 67 0.22 No 0 0 No -33 0.69 Yes 17 66.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69117424 + NM_133509 RAD51B 0 . . . 4.25 75.98 25 5.29 No 39 0.48 No 0 0 No -25 0.32 No 40 55.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68583850 + NM_133509 RAD51B 0 . . . 3.01 77.12 20 4.93 No 25 1.14 Yes 0 0 No -19 0.62 No 48 67.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68867137 + NM_004360 CDH1 0 . . . 5.46 86.31 20 5.71 Yes 59 1.04 Yes 0 0 No -26 0.54 No 44 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190738682 + NM_000534 PMS1 0 . . . 0.91 59.35 20 4.36 No 51 0.99 Yes 0 0 No -19 0.7 Yes 46 25.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68427690 + NM_133509 RAD51B 0 . . . 5.65 77.31 25 4.74 No 59 0.67 No 0 0 No -56 0.59 No 49 43.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89659318 + NM_000314 PTEN 0 . . . 2.81 0 19 5 No 14 0.69 No 0 0 No -18 0.66 No 44 83.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108127931 + NM_000051 ATM 0 . . . 5.33 83.95 23 4.9 No 3 1.68 Yes 0 0 No -22 0.6 No 40 76.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40996219 + NM_001164269 RAD51 0 . . . 2 81.84 26 5 No 32 0.97 Yes 0 0 No -26 0.49 No 50 77.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68879823 + NM_133509 RAD51B 0 . . . 1.21 66.12 35 5.29 No 38 0.21 No 0 0 No -24 0.51 No 17 53.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94220774 - NM_005591 MRE11 0 . . . 9.04 79.06 22 4.56 No 1 1.19 Yes 0 0 No -21 0.5 No 45 54.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59854127 - NM_032043 BRIP1 0 . . . 1.52 79.05 26 5.48 No 69 -2.85 No 0 0 No -25 0.47 No 35 38.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108226582 + NM_000051 ATM 0 . . . 2.41 76.94 19 6.32 Yes 61 -4.04 No 0 0 No -32 0.46 No 41 59.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89728420 + NM_000314 PTEN 0 . . . 3.72 81.68 27 5.35 No 36 -2.7 No 0 0 No -26 0.79 Yes 43 83.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21977029 - NM_000077 CDKN2A 0 . . . 0.43 66.76 21 4.7 No 34 -4.44 No 0 0 No -20 0.61 No 49 23.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23652371 - NM_024675 PALB2 0 . . . 1.86 0 24 5.92 Yes 11 2.31 Yes 0 0 No -23 0.6 No 47 75.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190724393 + NM_000534 PMS1 0 . . . 6.66 79.67 13 4.09 No 1 1.01 Yes 0 0 No -27 0.55 No 41 91.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41237273 - NM_007294 BRCA1 0 . . . 0.14 0 13 6.08 Yes 36 1.12 Yes 0 0 No -30 0.56 No 46 70.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69101819 + NM_133509 RAD51B 0 . . . 3.26 74.63 15 5.81 Yes 16 1.86 Yes 0 0 No -26 0.38 No 42 95.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32910201 + NM_000059 BRCA2 0 . . . 6.81 85.51 48 6.31 Yes 5 1.08 Yes 0 0 No -48 0.71 Yes 53 73.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108212938 + NM_000051 ATM 0 . . . 1.05 66.57 49 7.13 Yes 56 -4.13 No 0 0 No -33 0.72 Yes 56 26.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68704044 + NM_133509 RAD51B 0 . . . 1.49 55.59 19 5 No 40 0.15 No 0 0 No -50 0.84 Yes 40 29.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89682299 + NM_000314 PTEN 0 . . . 5.57 81.16 20 4.47 No 70 -3.55 No 0 0 No -22 0.27 No 48 53.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68389433 + NM_133509 RAD51B 0 . . . 2.66 0 37 6.48 Yes 71 0.08 No 0 0 No -36 0.65 No 37 76.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37088216 + NM_000249 MLH1 0 . . . 4.42 84.22 13 4.36 No 8 1.13 Yes 0 0 No -20 0.74 Yes 50 94.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47642370 + NM_000251 MSH2 0 . . . 8.5 80.31 16 4.54 No 74 0.25 No 0 0 No -26 0.55 No 11 80.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90963231 - NM_002485 NBN 0 . . . 6.37 77.21 37 5.02 No 50 1.13 Yes 0 0 No -29 0.35 No 42 56.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33447855 - NM_002878 RAD51D 0 . . . 2.22 69.77 25 4.9 No 70 -5.65 No 0 0 No -24 0.42 No 47 63.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32902655 + NM_000059 BRCA2 0 . . . 2.96 76.37 15 5.29 No 36 1.51 Yes 0 0 No -14 0.53 No 45 94.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215623640 - NM_000465 BARD1 0 . . . 8.77 85.8 17 6.08 Yes 17 0.09 No 0 0 No -16 0.71 Yes 40 46.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105179236 + NM_021930 RINT1 0 . . . 2.29 75.06 19 4.79 No 24 0.09 No 0 0 No -19 0.74 Yes 47 59.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68428407 + NM_133509 RAD51B 0 . . . 7.49 80.01 15 5.83 Yes 76 0.09 No 0 0 No -27 0.64 No 53 38.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47647987 + NM_000251 MSH2 0 . . . 3.33 75.69 16 4.36 No 19 -3.36 No 0 0 No -44 0.94 Yes 44 40.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47688565 + NM_000251 MSH2 0 . . . 10.16 84.62 20 5.1 No 23 0.6 No 0 0 No -19 0.79 Yes 44 50.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59834067 - NM_032043 BRIP1 0 . . . 0.06 55.49 25 5.02 No 74 0.69 No 0 0 No -21 0.71 Yes 40 56.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84386348 - NM_139076 FAM175A 0 . . . 1.19 87.45 16 5.29 No 27 1.86 Yes 0 0 No -21 0.85 Yes 50 87.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94218132 - NM_005591 MRE11 0 . . . 3.68 70.85 24 6.56 Yes 13 0.99 Yes 0 0 No -23 0.84 Yes 45 80.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152371950 - NM_005431 XRCC2 0 . . . 1.66 68.56 29 6.31 Yes 24 0.6 No 0 0 No -28 0.64 No 31 78.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41235559 - NM_007294 BRCA1 0 . . . 4.01 70.7 18 5.07 No 32 -3 No 0 0 No -28 0.41 No 46 29.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68292845 + NM_133509 RAD51B 0 . . . 9.18 85.96 23 5.52 No 62 -4.1 No 0 0 No -22 0.71 Yes 43 47.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23621145 - NM_024675 PALB2 0 . . . 1.07 54.59 35 4.56 No 17 0.47 No 0 0 No -29 0.58 No 41 71.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68736978 + NM_133509 RAD51B 0 . . . 1.7 73.73 36 5.47 No -3 0.66 No 0 0 No -36 0.62 No 45 56.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68852544 + NM_133509 RAD51B 0 . . . 3.63 82.2 44 5 No 5 1.21 Yes 0 0 No -33 0.33 No 47 54.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68748800 + NM_133509 RAD51B 0 . . . 1.76 68.95 16 4.69 No 10 1.78 Yes 0 0 No -44 0.35 No 42 91.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40987780 + NM_001164269 RAD51 0 . . . 4.26 68.94 27 5.11 No 64 -2.03 No 0 0 No -26 0.84 Yes 40 41.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215671923 - NM_000465 BARD1 0 . . . 5.32 70.75 20 4.99 No 19 0.82 Yes 0 0 No -19 0.78 Yes 35 68.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131949552 + NM_005732 RAD50 0 . . . 3.49 70.85 33 5.74 Yes 23 1.59 Yes 0 0 No -32 0.74 Yes 45 68.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108159065 + NM_000051 ATM 0 . . . 0.1 61.74 16 4.29 No 55 0.68 No 0 0 No -20 0.49 No 45 44.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89627479 + NM_000314 PTEN 0 . . . 0.82 0 15 4.58 No 36 -4.28 No 0 0 No -32 0.75 Yes 51 45.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190714616 + NM_000534 PMS1 0 . . . 1.93 84.41 25 5.44 No 14 0.82 Yes 0 0 No -24 0.83 Yes 44 63.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190691340 + NM_000534 PMS1 0 . . . 0.04 75.03 29 5.45 No 57 0.46 No 0 0 No -41 0.81 Yes 48 74.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68748121 + NM_133509 RAD51B 0 . . . 7.75 79.7 29 6.7 Yes 8 2.16 Yes 0 0 No -28 0.73 Yes 50 84.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47685263 + NM_000251 MSH2 0 . . . 2.03 0 20 7.14 Yes 72 0.81 Yes 0 0 No -28 0.46 No 36 63.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152374472 - NM_005431 XRCC2 0 . . . 0.62 76.63 16 4.97 No 58 -3.88 No 0 0 No -19 0.46 No 43 39.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89671466 + NM_000314 PTEN 0 . . . 8.4 84.86 24 4.88 No 39 0.1 No 0 0 No -23 0.92 Yes 49 26.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105193059 + NM_021930 RINT1 0 . . . 7.4 82.61 13 5.14 No 47 1.44 Yes 0 0 No -20 0.43 No 45 51.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108119856 + NM_000051 ATM 0 . . . 7.93 89.34 16 5.28 No 28 0.67 No 0 0 No -27 0.86 Yes 47 52.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152345486 - NM_005431 XRCC2 0 . . . 8.23 83.64 18 4.66 No 43 0.56 No 0 0 No -21 0.46 No 33 48.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69006153 + NM_133509 RAD51B 0 . . . 6.73 78.57 36 5.55 No NA NA NA 0 0 No -35 0.87 Yes 38 75.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47720027 + NM_000251 MSH2 0 . . . 2.61 72.1 20 5.57 Yes 50 -3.65 No 0 0 No -19 0.58 No 47 59.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41016819 + NM_001164269 RAD51 0 . . . 3.57 78.67 26 5.38 No 73 1.51 Yes 0 0 No -25 0.94 Yes 50 70.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47645721 + NM_000251 MSH2 0 . . . 2.39 64.56 27 5.2 No 73 0.37 No 0 0 No -26 0.94 Yes 33 72.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69128618 + NM_133509 RAD51B 0 . . . 2.94 68.97 25 6.71 Yes 31 0.66 No 0 0 No -24 0.96 Yes 31 73.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59933777 - NM_032043 BRIP1 0 . . . 4.26 71.46 38 6.08 Yes 22 0.34 No 0 0 No -37 0.77 Yes 36 63.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68787862 + NM_133509 RAD51B 0 . . . 2.66 74.05 30 6.4 Yes 38 1.23 Yes 0 0 No -29 0.88 Yes 20 44.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32943892 + NM_000059 BRCA2 0 . . . 4.74 85.31 33 6.29 Yes 13 1.24 Yes 0 0 No -25 0.43 No 45 96.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68468748 + NM_133509 RAD51B 0 . . . 6.59 84.89 9 3.87 No 71 0.82 Yes 0 0 No -27 0.7 Yes 43 58.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68703272 + NM_133509 RAD51B 0 . . . 0.4 72.53 27 6.24 Yes 68 0.57 No 0 0 No -26 0.79 Yes 32 32.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59911346 - NM_032043 BRIP1 0 . . . 3.94 76.36 17 5.81 Yes 44 0.52 No 0 0 No -28 0.28 No 34 83.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89716671 + NM_000314 PTEN 0 . . . 0.14 63.88 48 7.64 Yes 44 0.42 No 0 0 No -22 0.43 No 43 43.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75500409 - NM_001040108 MLH3 0 . . . 11.48 91.77 12 4.55 No 10 0.52 No 0 0 No -27 0.59 No 44 60.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152354642 - NM_005431 XRCC2 0 . . . 1.58 73.14 26 7.19 Yes 3 0.21 No 0 0 No -23 0.43 No 55 60.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29116713 - NM_001005735 CHEK2 0 . . . 4.16 73.67 29 4.85 No 62 -2.63 No 0 0 No -28 0.85 Yes 45 52.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108223505 + NM_000051 ATM 0 . . . 2.03 71.36 15 3.33 No 55 -3.42 No 0 0 No -18 0.31 No 44 58.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68345077 + NM_133509 RAD51B 0 . . . 2.39 57.87 18 5.73 Yes 64 0.73 No 0 0 No -21 0.46 No 35 95.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59852486 - NM_032043 BRIP1 0 . . . 2.83 67.14 16 5.04 No 76 -6.36 No 0 0 No -20 0.76 Yes 48 78.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69078615 + NM_133509 RAD51B 0 . . . 6.01 93.82 27 5.03 No 22 0.91 Yes 0 0 No -26 0.94 Yes 47 78.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89640338 + NM_000314 PTEN 0 . . . 0.35 65.75 17 6.08 Yes 40 -1.58 No 0 0 No -16 0.7 Yes 38 41.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47763436 + NM_000251 MSH2 0 . . . 8.78 81.57 26 5.29 No 38 1.33 Yes 0 0 No -24 0.79 Yes 48 66.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47681211 + NM_000251 MSH2 0 . . . 1.69 0 17 5.21 No 35 0.39 No 0 0 No -27 0.8 Yes 39 57.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69137147 + NM_133509 RAD51B 0 . . . 0.19 70.71 21 5.2 No 20 1.14 Yes 0 0 No -23 0.8 Yes 38 81.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68914994 + NM_133509 RAD51B 0 . . . 2.03 70.44 26 5.66 Yes 17 -3.57 No 0 0 No -25 0.49 No 36 59.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56809244 + NM_058216 RAD51C 0 . . . 1.85 67.65 44 6.69 Yes 41 1.39 Yes 0 0 No -34 0.5 No 62 23.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29082333 - NM_001005735 CHEK2 0 . . . 4.35 72.73 18 3.84 No 31 -3.51 No 0 0 No -53 0.53 No 42 65.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32948987 + NM_000059 BRCA2 0 . . . 2.48 68.18 30 6.39 Yes 65 0.83 Yes 0 0 No -29 0.69 Yes 41 60.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94217758 - NM_005591 MRE11 0 . . . 2.03 0 14 4.47 No 52 0.78 Yes 0 0 No -29 0.29 No 44 69.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41024382 + NM_001164269 RAD51 0 . . . 0.71 0 19 5 No 16 0.17 No 0 0 No -18 0.52 No 38 37.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59901172 - NM_032043 BRIP1 0 . . . 8.97 87.06 18 6.55 Yes 23 0.02 No 0 0 No -30 0.55 No 35 75.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52439658 - NM_004656 BAP1 0 . . . 5.07 86.1 19 5.65 Yes 43 0.53 No 0 0 No -42 0.52 No 51 67.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68376893 + NM_133509 RAD51B 0 . . . 0.49 71.91 18 4.9 No 57 0.19 No 0 0 No -24 0.77 Yes 52 58.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41252405 - NM_007294 BRCA1 0 . . . 1.27 76.63 20 4.8 No 67 -4.96 No 0 0 No -19 0.82 Yes 48 79.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94161976 - NM_005591 MRE11 0 . . . 1.54 72.87 14 5.51 No 67 1.06 Yes 0 0 No -21 0.51 No 17 59.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69041908 + NM_133509 RAD51B 0 . . . 2.98 79.75 20 5.57 Yes 9 0.59 No 0 0 No -19 0.55 No 49 94.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47679617 + NM_000251 MSH2 0 . . . 2.89 68.34 16 5.35 No 21 1.25 Yes 0 0 No -24 0.39 No 37 69.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94173676 - NM_005591 MRE11 0 . . . 2.26 0 25 6.02 Yes 50 1.23 Yes 0 0 No -24 0.89 Yes 35 59.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59838986 - NM_032043 BRIP1 0 . . . 5.72 81.51 13 5.1 No 72 0.82 Yes 0 0 No -23 0.67 Yes 37 65.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215598648 - NM_000465 BARD1 0 . . . 1.56 67.07 36 6.2 Yes 7 1.23 Yes 0 0 No -31 0.4 No 35 48.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68823975 + NM_133509 RAD51B 0 . . . 1.78 72.78 20 5.1 No 76 1.2 Yes 0 0 No -19 0.83 Yes 40 89.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37093783 + NM_000249 MLH1 0 . . . 1.97 77.52 13 4.98 No 56 0.44 No 0 0 No -23 0.73 Yes 46 50.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68805092 + NM_133509 RAD51B 0 . . . 10.78 89.11 16 6.31 Yes 39 0.19 No 0 0 No -28 0.61 No 41 79.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59893083 - NM_032043 BRIP1 0 . . . 3.17 69.36 32 6.16 Yes 57 0.84 Yes 0 0 No -31 0.92 Yes 49 39.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108173925 + NM_000051 ATM 0 . . . 0.39 0 15 5.52 No 64 0.34 No 0 0 No -45 0.37 No 42 87.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68501033 + NM_133509 RAD51B 0 . . . 5.47 84.95 33 5.75 Yes 46 0.43 No 0 0 No -32 0.56 No 12 61.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108128933 + NM_000051 ATM 0 . . . 0.7 67.31 9 3.87 No 52 0.97 Yes 0 0 No -29 0.88 Yes 42 82.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59832215 - NM_032043 BRIP1 0 . . . 7.35 84.4 31 5.28 No 9 0.16 No 0 0 No -27 0.46 No 48 76.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90974657 - NM_002485 NBN 0 . . . 3.62 81.54 13 4.65 No 26 -2.68 No 0 0 No -24 0.43 No 50 88.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59776636 - NM_032043 BRIP1 0 . . . 1.55 82.36 20 5.06 No 4 0.64 No 0 0 No -19 0.25 No 50 85.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59932839 - NM_032043 BRIP1 0 . . . 0.74 84.22 33 6.66 Yes 76 1.31 Yes 0 0 No -22 0.79 Yes 51 50.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47650503 + NM_000251 MSH2 0 . . . 2.89 68.34 23 4.12 No 21 1.72 Yes 0 0 No -22 0.4 No 37 74.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94165808 - NM_005591 MRE11 0 . . . 5.2 85.02 12 5.38 No 5 1.23 Yes 0 0 No -22 0.56 No 53 80.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68768522 + NM_133509 RAD51B 0 . . . 1.19 76.16 25 6.48 Yes 31 1.22 Yes 0 0 No -24 0.77 Yes 27 87.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90986168 - NM_002485 NBN 0 . . . 2.77 67.21 27 5.67 Yes 28 0.54 No 0 0 No -26 0.82 Yes 40 57.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29134632 - NM_001005735 CHEK2 0 . . . 6.56 89.15 23 6.92 Yes 19 -1.91 No 0 0 No -23 0.51 No 39 67.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69146123 + NM_133509 RAD51B 0 . . . 5.9 77.98 19 5 No 23 1.11 Yes 0 0 No -23 0.35 No 35 43.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68377716 + NM_133509 RAD51B 0 . . . 6.04 73.36 20 6.15 Yes 10 1.06 Yes 0 0 No -19 0.54 No 48 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68633302 + NM_133509 RAD51B 0 . . . 2 65.34 20 4.9 No 35 0.28 No 0 0 No -19 0.93 Yes 40 79.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68895677 + NM_133509 RAD51B 0 . . . 5.49 72.7 22 5.19 No 60 1.9 Yes 0 0 No -29 0.54 No 47 91.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37066237 + NM_000249 MLH1 0 . . . 8.69 90.98 27 5.57 Yes 71 2.25 Yes 0 0 No -26 0.94 Yes 46 96.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68359327 + NM_133509 RAD51B 0 . . . 0.27 66.24 18 9.43 Yes 18 -1.11 No 0 0 No -17 0.46 No 40 49.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190656806 + NM_000534 PMS1 0 . . . 3.05 78.02 37 4.66 No 58 0.93 Yes 0 0 No -29 0.72 Yes 45 62.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23636743 - NM_024675 PALB2 0 . . . 0.75 0 64 9 Yes 15 0.54 No 0 0 No -27 0.62 No 42 83.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190739720 + NM_000534 PMS1 0 . . . 0.64 0 26 5.66 Yes 13 1.68 Yes 0 0 No -25 0.85 Yes 45 73.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89657213 + NM_000314 PTEN 0 . . . 3.87 83.67 28 5.09 No 3 0.89 Yes 0 0 No -27 0.85 Yes 42 54.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32974242 + NM_000059 BRCA2 0 . . . 8.05 86.32 39 6.32 Yes 69 0.82 Yes 0 0 No -21 0.79 Yes 51 51.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190673388 + NM_000534 PMS1 0 . . . 3.82 62.03 34 5.02 No 18 0.48 No 0 0 No -33 0.88 Yes 40 82.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69149562 + NM_133509 RAD51B 0 . . . 2.58 73.33 28 5.25 No 61 -4.41 No 0 0 No -35 0.35 No 45 49.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29129823 - NM_001005735 CHEK2 0 . . . 1.76 68.95 22 5.55 No 16 1.06 Yes 0 0 No -27 0.73 Yes 42 74.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68845916 + NM_004360 CDH1 0 . . . 2.78 69.99 20 4.24 No 29 1.08 Yes 0 0 No -22 0.62 No 29 18.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215598963 - NM_000465 BARD1 0 . . . 4.86 76.04 16 4.58 No 59 0.57 No 0 0 No -30 0.59 No 35 77.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68556676 + NM_133509 RAD51B 0 . . . 6.24 81.06 19 6.47 Yes 4 0.71 No 0 0 No -32 0.42 No 39 58.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68886958 + NM_133509 RAD51B 0 . . . 1.24 68.51 11 4.14 No 48 0.93 Yes 0 0 No -30 0.65 No 44 58.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33444979 - NM_002878 RAD51D 0 . . . 2.22 78.15 33 5.33 No 72 -6.02 No 0 0 No -26 0.36 No 48 57.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59856059 - NM_032043 BRIP1 0 . . . 4.61 82.71 15 5.38 No 56 -1.63 No 0 0 No -45 0.25 No 46 72.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68299963 + NM_133509 RAD51B 0 . . . 3.22 74.7 27 5.74 Yes 74 -2.79 No 0 0 No -26 0.42 No 52 39.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47685995 + NM_000251 MSH2 0 . . . 0.48 79.3 24 5.74 Yes 11 0.82 Yes 0 0 No -23 0.97 Yes 47 93.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7566855 - NM_000546 TP53 0 . . . 1.88 81.93 35 6.08 Yes 33 1.83 Yes 0 0 No -34 0.92 Yes 25 87.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68785006 + NM_004360 CDH1 0 . . . 1.82 0 19 4.35 No 55 1.02 Yes 0 0 No -18 0.78 Yes 45 94.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68870678 + NM_133509 RAD51B 0 . . . 9.27 88.1 29 4.24 No 37 -2.43 No 0 0 No -24 0.52 No 52 55.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89693523 + NM_000314 PTEN 0 . . . 4.71 69 32 4.57 No 35 1.24 Yes 0 0 No -28 0.38 No 23 59.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6015214 - NM_000535 PMS2 0 . . . 0.43 73.33 39 5.87 Yes 67 -4.96 No 0 0 No -23 0.62 No 48 68.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68919442 + NM_133509 RAD51B 0 . . . 4.36 86.56 13 5.69 Yes 55 1.73 Yes 0 0 No -20 0.74 Yes 42 51.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68896580 + NM_133509 RAD51B 0 . . . 5.46 0 30 5.66 Yes 33 1.2 Yes 0 0 No -25 0.61 No 49 55.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68963051 + NM_133509 RAD51B 0 . . . 8.39 79.43 30 7.32 Yes 43 0.25 No 0 0 No -29 0.69 Yes 50 84.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47728106 + NM_000251 MSH2 0 . . . 3.6 85.02 12 4.35 No 4 1.2 Yes 0 0 No -24 0.85 Yes 54 77.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131896589 + NM_005732 RAD50 0 . . . 1.09 59.95 23 4.86 No 26 0.99 Yes 0 0 No -48 0.76 Yes 26 72.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32933042 + NM_000059 BRCA2 0 . . . 0.92 76.63 24 4.13 No 45 -4.04 No 0 0 No -27 0.9 Yes 43 39.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68815170 + NM_133509 RAD51B 0 . . . 9.57 90.95 16 5.48 No 6 0.66 No 0 0 No -25 0.73 Yes 45 94.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75483349 - NM_001040108 MLH3 0 . . . 3.92 0 14 4.47 No 33 0.32 No 0 0 No -54 0.43 No 38 29.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68359268 + NM_133509 RAD51B 0 . . . 3.4 0 34 6.32 Yes 27 0.29 No 0 0 No -33 0.54 No 35 47.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59834373 - NM_032043 BRIP1 0 . . . 0.29 0 14 4.36 No 6 0.31 No 0 0 No -27 0.7 Yes 52 57.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56768536 + NM_058216 RAD51C 0 . . . 8.02 93.46 21 3.77 No 75 0.18 No 0 0 No -18 0.6 No 50 76.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47700551 + NM_000251 MSH2 0 . . . 5.9 75.8 28 5.38 No 26 1.41 Yes 0 0 No -27 0.46 No 45 73.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47661119 + NM_000251 MSH2 0 . . . 0.87 58.61 28 5.74 Yes 9 -1.05 No 0 0 No -39 0.35 No 49 28.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68778274 + NM_133509 RAD51B 0 . . . 1.35 70.28 21 4.8 No 65 0.6 No 0 0 No -20 0.84 Yes 51 56.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59924014 - NM_032043 BRIP1 0 . . . 0.09 74.68 26 5.66 Yes 4 0.41 No 0 0 No -29 0.84 Yes 54 87.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84393306 - NM_139076 FAM175A 0 . . . 0.73 64.06 27 4.82 No 47 1.46 Yes 0 0 No -26 0.53 No 15 63.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59921332 - NM_032043 BRIP1 0 . . . 0.56 77.1 12 6.16 Yes 66 -4.89 No 0 0 No -24 0.68 Yes 47 51.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68341420 + NM_133509 RAD51B 0 . . . 2.85 72.92 28 5.57 Yes 54 0.8 Yes 0 0 No -27 0.81 Yes 48 47.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68783351 + NM_004360 CDH1 0 . . . 6.44 77.69 31 5.74 Yes 17 1.09 Yes 0 0 No -30 0.84 Yes 41 90.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68791202 + NM_004360 CDH1 0 . . . 0.42 74.73 22 4.45 No 33 1.16 Yes 0 0 No -20 0.3 No 14 43.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68845890 + NM_004360 CDH1 0 . . . 0.42 71.18 60 7.9 Yes 3 1.11 Yes 0 0 No -24 0.76 Yes 39 38.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68401788 + NM_133509 RAD51B 0 . . . 4.18 78.86 27 5.2 No 7 0.81 Yes 0 0 No -26 0.64 No 51 85.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1229679 + NM_000455 STK11 0 . . . 2.63 67.06 20 5.68 Yes NA NA NA 0 0 No -24 0.61 No 40 78.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108236266 + NM_000051 ATM 0 . . . 4.74 82.88 19 4.78 No 2 1 Yes 0 0 No -21 0.4 No 44 71.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152352734 - NM_005431 XRCC2 0 . . . 2.7 73.58 22 7.28 Yes 39 1.49 Yes 0 0 No -21 0.88 Yes 44 35.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68393382 + NM_133509 RAD51B 0 . . . 3.27 68.95 12 4.84 No 16 1.1 Yes 0 0 No -28 0.23 No 42 90.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108190122 + NM_000051 ATM 0 . . . 4.37 83.93 26 5.3 No 11 -0.55 No 0 0 No -61 0.32 No 22 93.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47640419 + NM_000251 MSH2 0 . . . 3 68.25 66 7.01 Yes 69 0.27 No 0 0 No -32 0.79 Yes 22 69.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59898147 - NM_032043 BRIP1 0 . . . 3.6 85.02 63 5.98 Yes 4 1.2 Yes 0 0 No -29 0.33 No 54 62.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68510971 + NM_133509 RAD51B 0 . . . 0.52 74.11 26 3.98 No 59 -3.01 No 0 0 No -26 0.55 No 44 73.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94188356 - NM_005591 MRE11 0 . . . 2.61 75.03 15 4.58 No -4 1.21 Yes 0 0 No -43 0.61 No 44 53.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47792474 + NM_000251 MSH2 0 . . . 4.2 70 20 5.25 No -3 0.02 No 0 0 No -19 0.67 Yes 45 91.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131909543 + NM_005732 RAD50 0 . . . 0.37 69.84 37 5.29 No 11 -1.46 No 0 0 No -36 0.54 No 47 61.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37037156 + NM_000249 MLH1 0 . . . 2.07 71.8 23 5.89 Yes 57 1.57 Yes 0 0 No -22 0.86 Yes 48 44.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45796085 - NM_001048171 MUTYH 0 . . . 6.28 91.58 28 5.12 No 20 0.63 No 0 0 No -27 0.46 No 38 95.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37087101 + NM_000249 MLH1 0 . . . 7.52 84.14 24 5.41 No 4 1.61 Yes 0 0 No -23 0.85 Yes 45 85.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32921177 + NM_000059 BRCA2 0 . . . 1.1 63.65 30 5.36 No 42 1.33 Yes 0 0 No -29 0.4 No 30 59.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190738867 + NM_000534 PMS1 0 . . . 3.21 76.27 38 5.82 Yes 61 0.35 No 0 0 No -34 0.64 No 51 45.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59773429 - NM_032043 BRIP1 0 . . . 1.93 72.69 20 5.45 No 40 0.3 No 0 0 No -32 0.7 Yes 48 87.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68816973 + NM_133509 RAD51B 0 . . . 10.74 86.43 18 4.24 No 5 1.19 Yes 0 0 No -27 0.77 Yes 44 62.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68393643 + NM_133509 RAD51B 0 . . . 3.5 74.52 20 5.57 Yes 4 0.02 No 0 0 No -19 0.64 No 45 60.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69082766 + NM_133509 RAD51B 0 . . . 7.48 83.27 16 4.69 No 74 1.7 Yes 0 0 No -21 0.55 No 38 80.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47685853 + NM_000251 MSH2 0 . . . 3.6 85.02 21 5.74 Yes 4 1.2 Yes 0 0 No -20 0.82 Yes 54 69.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215638378 - NM_000465 BARD1 0 . . . 3.88 81.97 21 4.87 No 23 0.72 No 0 0 No -20 0.66 No 48 64.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32905297 + NM_000059 BRCA2 0 . . . 2.86 70.07 30 7.14 Yes 67 0.5 No 0 0 No -29 0.42 No 42 77.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68642672 + NM_133509 RAD51B 0 . . . 2.79 79.47 30 4.56 No 56 0.5 No 0 0 No -29 0.81 Yes 42 84.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56779401 + NM_058216 RAD51C 0 . . . 7.29 86.51 24 5.31 No 46 2.41 Yes 0 0 No -30 0.49 No 12 92.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6018168 - NM_000535 PMS2 0 . . . 0.82 77.18 18 4.9 No 68 0.35 No 0 0 No -25 0.81 Yes 54 77.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37075289 + NM_000249 MLH1 0 . . . 0.84 77.91 60 7.8 Yes 3 0.16 No 0 0 No -36 0.52 No 41 36.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41008953 + NM_001164269 RAD51 0 . . . 3.87 88.29 27 5.08 No 9 1.04 Yes 0 0 No -26 0.64 No 49 96.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32971747 + NM_000059 BRCA2 0 . . . 1.37 60.85 22 3.99 No 17 0.86 Yes 0 0 No -21 0.62 No 20 83.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68796247 + NM_133509 RAD51B 0 . . . 0.99 76.07 33 6.11 Yes 71 -1.89 No 0 0 No -24 0.85 Yes 16 75.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152351477 - NM_005431 XRCC2 0 . . . 9.9 78.04 24 5.29 No 29 1.58 Yes 0 0 No -23 0.89 Yes 29 58.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68961031 + NM_133509 RAD51B 0 . . . 1.58 71.91 41 6.47 Yes 2 0.08 No 0 0 No -40 0.65 No 35 55.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68944930 + NM_133509 RAD51B 0 . . . 0.84 74.58 32 5.81 Yes 58 -3.9 No 0 0 No -27 0.42 No 48 29.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59802546 - NM_032043 BRIP1 0 . . . 5.47 82.83 12 4.67 No 49 1.76 Yes 0 0 No -38 0.56 No 38 60.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190720236 + NM_000534 PMS1 0 . . . 2.87 70.12 20 7.96 Yes 35 1.15 Yes 0 0 No -27 0.93 Yes 47 47.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59919789 - NM_032043 BRIP1 0 . . . 8.41 89.01 22 4.68 No 39 0.89 Yes 0 0 No -21 0.77 Yes 53 67.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48024190 + NM_000179 MSH6 0 . . . 1.43 0 37 8.5 Yes 63 -4.96 No 0 0 No -26 0.81 Yes 37 26.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41263017 - NM_007294 BRCA1 0 . . . 1.41 84.22 27 5.22 No 33 1.21 Yes 0 0 No -23 0.48 No 50 71.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68539703 + NM_133509 RAD51B 0 . . . 6.57 78.84 20 7.14 Yes 67 0.26 No 0 0 No -19 0.59 No 50 44.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47736013 + NM_000251 MSH2 0 . . . 9.09 78.8 36 6.85 Yes 13 1.42 Yes 0 0 No -35 0.74 Yes 45 90.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37059312 + NM_000249 MLH1 0 . . . 0.81 84.03 16 5.2 No 38 0.21 No 0 0 No -20 0.43 No 47 90.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69019474 + NM_133509 RAD51B 0 . . . 4.03 79.13 20 6.08 Yes 28 1.16 Yes 0 0 No -19 0.78 Yes 40 32.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68887252 + NM_133509 RAD51B 0 . . . 10.45 78.27 19 5.68 Yes 67 0.44 No 0 0 No -27 0.83 Yes 51 54.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108160967 + NM_000051 ATM 0 . . . 6.92 83.58 21 5.08 No 4 0.95 Yes 0 0 No -20 0.77 Yes 38 57.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48019441 + NM_000179 MSH6 0 . . . 0.2 54.46 15 8.49 Yes 73 1.59 Yes 0 0 No -42 0.83 Yes 31 39.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45806965 - NM_001048171 MUTYH 0 . . . 4.46 72.29 16 4.67 No 41 0.24 No 0 0 No -45 0.62 No 25 61.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59766266 - NM_032043 BRIP1 0 . . . 5.68 76.52 15 4.56 No 65 1.47 Yes 0 0 No -42 0.56 No 47 89.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131940970 + NM_005732 RAD50 0 . . . 2.15 67.22 44 7.5 Yes 56 1.19 Yes 0 0 No -22 0.46 No 54 33.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68802112 + NM_004360 CDH1 0 . . . 2.61 70.85 19 4.21 No 23 1.59 Yes 0 0 No -18 0.87 Yes 35 70.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108213051 + NM_000051 ATM 0 . . . 4.3 78.31 29 5 No 6 0.56 No 0 0 No -28 0.29 No 52 54.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68620898 + NM_133509 RAD51B 0 . . . 2.83 73.52 55 8.67 Yes 5 0.74 No 0 0 No -20 0.69 Yes 39 56.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59882388 - NM_032043 BRIP1 0 . . . 4.62 83.11 39 9.85 Yes 1 0.06 No 0 0 No -31 0.76 Yes 47 33.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69069826 + NM_133509 RAD51B 0 . . . 11.19 78.55 27 5.47 No 13 1.43 Yes 0 0 No -29 0.5 No 45 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69075833 + NM_133509 RAD51B 0 . . . 4.17 72.59 20 5.1 No 47 1.88 Yes 0 0 No -19 0.75 Yes 33 76.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7592590 - NM_000546 TP53 0 . . . 4.05 75.86 22 5 No 66 0.6 No 0 0 No -21 0.78 Yes 45 58.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94166431 - NM_005591 MRE11 0 . . . 4.36 75.22 70 8.27 Yes 4 0.45 No 0 0 No -25 0.65 No 46 65.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69017934 + NM_133509 RAD51B 0 . . . 6.27 74.68 14 3.55 No 52 0.48 No 0 0 No -27 0.61 No 44 92.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68719457 + NM_133509 RAD51B 0 . . . 3.26 76.29 34 6.08 Yes 6 1.21 Yes 0 0 No -33 0.76 Yes 40 93.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29116766 - NM_001005735 CHEK2 0 . . . 0.61 66.62 15 4.58 No 74 -2.76 No 0 0 No -14 0.45 No 49 39.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68627398 + NM_133509 RAD51B 0 . . . 2.4 79.71 26 5.43 No 24 0.82 Yes 0 0 No -25 0.91 Yes 45 86.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59859181 - NM_032043 BRIP1 0 . . . 1.41 84.22 27 5.29 No 33 0.98 Yes 0 0 No -26 0.82 Yes 50 45.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29137232 - NM_001005735 CHEK2 0 . . . 3.81 74.44 32 6.92 Yes 15 -0.5 No 0 0 No -31 0.88 Yes 43 62.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68756121 + NM_133509 RAD51B 0 . . . 2.4 63.55 21 5.77 Yes -2 0.41 No 0 0 No -20 0.66 No 45 48.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94179940 - NM_005591 MRE11 0 . . . 0.36 68.91 12 4.76 No 22 -2.51 No 0 0 No -28 0.67 Yes 45 31.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108140233 + NM_000051 ATM 0 . . . 3.86 70.99 30 5.23 No 53 -1.25 No 0 0 No -22 0.88 Yes 22 69.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190743217 + NM_000534 PMS1 0 . . . 4.42 73.01 12 4.24 No 33 1.46 Yes 0 0 No -25 0.49 No 46 64.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41024370 + NM_001164269 RAD51 0 . . . 3.34 77.15 12 5.39 No 4 0.16 No 0 0 No -26 0.59 No 47 59.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47748154 + NM_000251 MSH2 0 . . . 1.39 60.52 17 5.22 No 9 0.13 No 0 0 No -29 0.57 No 49 50.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37092127 + NM_000249 MLH1 0 . . . 2.83 65.32 19 5.48 No 65 1.7 Yes 0 0 No -18 0.6 No 49 86.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68485384 + NM_133509 RAD51B 0 . . . 4.06 81.38 30 5.57 Yes 20 1.07 Yes 0 0 No -29 0.54 No 38 76.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68746534 + NM_133509 RAD51B 0 . . . 1.69 70.25 29 5.3 No 27 0.33 No 0 0 No -28 0.9 Yes 46 38.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108128701 + NM_000051 ATM 0 . . . 3.93 78.61 33 5.97 Yes 55 1.59 Yes 0 0 No -33 0.49 No 46 57.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108212344 + NM_000051 ATM 0 . . . 1.48 62.56 26 4.63 No 57 0.22 No 0 0 No -25 0.86 Yes 51 64.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108126416 + NM_000051 ATM 0 . . . 3.13 68.34 21 4.91 No 23 1.57 Yes 0 0 No -45 0.34 No 40 62.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68836584 + NM_004360 CDH1 0 . . . 0.42 74.73 11 5.47 No 33 1.16 Yes 0 0 No -24 0.47 No 25 50.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68440702 + NM_133509 RAD51B 0 . . . 0.96 71.22 26 6.03 Yes 65 0.76 No 0 0 No -25 0.7 Yes 39 55.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75501703 - NM_001040108 MLH3 0 . . . 3.2 78.48 47 7.8 Yes 50 -0.41 No 0 0 No -24 0.93 Yes 44 65.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108200591 + NM_000051 ATM 0 . . . 2.99 71.45 29 5.92 Yes 75 0.85 Yes 0 0 No -28 0.56 No 27 85.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89624781 + NM_000314 PTEN 0 . . . 4.19 0 28 4.66 No -2 0.89 Yes 0 0 No -27 0.88 Yes 56 59.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32934678 + NM_000059 BRCA2 0 . . . 4.74 85.02 25 5.64 Yes 4 1.17 Yes 0 0 No -35 0.41 No 54 58.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89703328 + NM_000314 PTEN 0 . . . 1.86 68.94 30 5.34 No 17 0.47 No 0 0 No -29 0.53 No 40 42.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59854851 - NM_032043 BRIP1 0 . . . 4.37 71.8 31 5.81 Yes -1 0.42 No 0 0 No -30 0.73 Yes 42 39.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47656262 + NM_000251 MSH2 0 . . . 0.78 84.22 13 6.78 Yes 33 1.13 Yes 0 0 No -43 0.4 No 50 44.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108169102 + NM_000051 ATM 0 . . . 2.67 71.24 15 4.76 No 66 1.15 Yes 0 0 No -44 0.44 No 44 24.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94187718 - NM_005591 MRE11 0 . . . 9.41 93.27 37 6.48 Yes 33 0.5 No 0 0 No -36 0.51 No 40 56.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59790509 - NM_032043 BRIP1 0 . . . 0.75 84.96 49 7.18 Yes 74 -3.09 No 0 0 No -48 0.47 No 48 80.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68469432 + NM_133509 RAD51B 0 . . . 1.24 65.55 19 5 No 8 0.27 No 0 0 No -15 0.31 No 39 91.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68350318 + NM_133509 RAD51B 0 . . . 2.83 70.52 14 4 No 9 0.49 No 0 0 No -12 0.48 No 13 39.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131891415 + NM_005732 RAD50 0 . . . 2.2 72.26 27 5.2 No 30 1.18 Yes 0 0 No -23 0.65 No 28 59.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131967292 + NM_005732 RAD50 0 . . . 1.68 0 24 4.6 No -3 0.68 No 0 0 No -23 0.77 Yes 48 37.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69058023 + NM_133509 RAD51B 0 . . . 5.13 82.36 21 4.58 No 15 1.34 Yes 0 0 No -18 0.7 Yes 43 94.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47805970 + NM_000251 MSH2 0 . . . 0.32 67.58 23 4.59 No 20 0.67 No 0 0 No -22 0.82 Yes 38 74.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23612811 - NM_024675 PALB2 0 . . . 2.7 55.37 53 6.59 Yes 30 0.6 No 0 0 No -25 0.45 No 28 82.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190733934 + NM_000534 PMS1 0 . . . 7.34 66.03 26 5.83 Yes 24 1.18 Yes 0 0 No -25 0.6 No 38 82.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68900486 + NM_133509 RAD51B 0 . . . 4.39 86.03 38 6.25 Yes 30 0.98 Yes 0 0 No -37 0.74 Yes 43 68.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68575718 + NM_133509 RAD51B 0 . . . 1.36 90.71 43 8.34 Yes 14 -2.79 No 0 0 No -42 0.53 No 49 64.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108184400 + NM_000051 ATM 0 . . . 2.4 63.17 18 4.9 No 67 1.54 Yes 0 0 No -23 0.35 No 41 64.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215656995 - NM_000465 BARD1 0 . . . 6.78 75.94 48 6.28 Yes 66 -3.04 No 0 0 No -32 0.4 No 42 48.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215635874 - NM_000465 BARD1 0 . . . 5.42 75.62 37 6.56 Yes 34 -1.73 No 0 0 No -34 0.5 No 38 78.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7571324 - NM_000546 TP53 0 . . . 0.69 73.08 15 4.58 No 46 0.35 No 0 0 No -55 0.62 No 53 38.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645636 - NM_024675 PALB2 0 . . . 2.39 76.44 41 6.41 Yes 7 0.49 No 0 0 No -23 0.56 No 51 84.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108238126 + NM_000051 ATM 0 . . . 5.68 80.24 23 4.52 No 40 -1.21 No 0 0 No -23 0.54 No 44 82.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68362868 + NM_133509 RAD51B 0 . . . 0.83 69.96 35 6.4 Yes 37 0.49 No 0 0 No -34 0.67 Yes 48 58.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673078 + NM_000534 PMS1 0 . . . 1.88 0 21 7.21 Yes 19 0.57 No 0 0 No -20 0.77 Yes 43 74.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94198367 - NM_005591 MRE11 0 . . . 1.74 70.34 18 4.9 No 59 0.51 No 0 0 No -19 0.76 Yes 49 57.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56772089 + NM_058216 RAD51C 0 . . . 0.72 78.15 29 7.35 Yes 76 1.17 Yes 0 0 No -28 0.85 Yes 45 88.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68720207 + NM_133509 RAD51B 0 . . . 8.09 83.67 18 4.58 No 13 1.84 Yes 0 0 No -36 0.36 No 45 69.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1219065 + NM_000455 STK11 0 . . . 5.2 74.02 44 7.66 Yes 69 -0.74 No 0 0 No -26 0.42 No 44 34.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68835638 + NM_004360 CDH1 0 . . . 0.11 62.54 19 4.97 No 69 0.58 No 31 0.17 Yes -15 0.33 No 38 41.57 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 190672286 + NM_000534 PMS1 0 . . . 3.37 82.61 16 4.95 No 36 0.42 No 0 0 No -32 0.28 No 44 88.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152365913 - NM_005431 XRCC2 0 . . . 0.49 65.85 37 5.88 Yes -1 0.77 Yes 0 0 No -35 0.51 No 49 57.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215655777 - NM_000465 BARD1 0 . . . 1.21 72.05 16 5.66 Yes 0 0.77 No 0 0 No -23 0.66 No 51 70.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94151876 - NM_005591 MRE11 0 . . . 4.4 70.66 17 4.63 No 25 0.61 No 0 0 No -29 0.42 No 37 92.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68742495 + NM_133509 RAD51B 0 . . . 1.03 77.45 17 6.93 Yes 32 1.21 Yes 0 0 No -27 0.54 No 45 30.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75518585 - NM_001040108 MLH3 0 . . . 1.79 64.58 41 9.02 Yes 22 1.05 Yes 0 0 No -31 0.65 No 46 54.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59827959 - NM_032043 BRIP1 0 . . . 2.02 83.03 29 4.74 No 0 0.95 Yes 0 0 No -19 0.58 No 41 75.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215630712 - NM_000465 BARD1 0 . . . 3.09 73.59 26 5.48 No 26 -2.78 No 0 0 No -25 0.74 Yes 52 40.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7563416 - NM_000546 TP53 0 . . . 0.65 70.53 26 5.92 Yes 34 -2.86 No 0 0 No -24 0.74 Yes 43 60.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56807239 + NM_058216 RAD51C 0 . . . 7.8 69.84 19 4.58 No 66 1.56 Yes 0 0 No -18 0.9 Yes 45 49.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69123019 + NM_133509 RAD51B 0 . . . 3 0 15 5.39 No 1 0.69 No 0 0 No -26 0.25 No 52 68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68850082 + NM_133509 RAD51B 0 . . . 6.68 83.41 16 4.07 No 64 0.48 No 0 0 No -19 0.39 No 45 77.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68391571 + NM_133509 RAD51B 0 . . . 4.13 79.98 17 4.65 No 54 0.72 No 0 0 No -24 0.48 No 50 37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94160332 - NM_005591 MRE11 0 . . . 5.61 69.09 20 4.69 No 8 1.17 Yes 0 0 No -19 0.88 Yes 36 55.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68396724 + NM_133509 RAD51B 0 . . . 2.49 0 41 6.98 Yes 21 0.68 No 0 0 No -37 0.61 No 37 57.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7579198 - NM_000546 TP53 0 . . . 7.09 79.91 16 5.39 No 8 1.14 Yes 0 0 No -24 0.47 No 50 87.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32968495 + NM_000059 BRCA2 0 . . . 0.03 66.56 22 5.29 No 60 0.88 Yes 0 0 No -21 0.64 No 55 28.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190661973 + NM_000534 PMS1 0 . . . 1.98 60.27 26 4.93 No 0 0.29 No 0 0 No -25 0.65 No 48 70.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89721529 + NM_000314 PTEN 0 . . . 5.6 87.11 27 6.48 Yes 49 2.16 Yes 0 0 No -29 0.6 No 38 83.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47646388 + NM_000251 MSH2 0 . . . 1.87 80.12 18 4.89 No 6 1.13 Yes 0 0 No -17 0.22 No 52 65.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41260061 - NM_007294 BRCA1 0 . . . 4.69 82.24 45 8.79 Yes 1 1.34 Yes 0 0 No -21 0.45 No 53 43.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47761271 + NM_000251 MSH2 0 . . . 2.67 70.12 9 3.87 No 2 0.13 No 0 0 No -22 0.72 Yes 47 78.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7574180 - NM_000546 TP53 0 . . . 1.15 68.45 47 6.84 Yes 28 0.2 No 0 0 No -20 0.41 No 42 83.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69103357 + NM_133509 RAD51B 0 . . . 6.05 79.08 17 5.57 Yes 58 -1.86 No 0 0 No -27 0.62 No 44 68.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41230600 - NM_007294 BRCA1 0 . . . 5.28 78.87 32 6.16 Yes 34 0.8 Yes 0 0 No -31 0.81 Yes 24 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68592956 + NM_133509 RAD51B 0 . . . 3.43 69.79 17 5.86 Yes 58 1.04 Yes 0 0 No -24 0.48 No 42 72.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69020686 + NM_133509 RAD51B 0 . . . 1.43 0 24 6.42 Yes 0 1.02 Yes 0 0 No -23 0.81 Yes 52 42.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90998818 - NM_002485 NBN 0 . . . 6.97 81.03 15 5 No 64 0.13 No 0 0 No -23 0.63 No 35 80.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37049121 + NM_000249 MLH1 0 . . . 6.39 69.5 36 6.75 Yes 65 0.75 No 0 0 No -35 0.69 Yes 40 81.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69006663 + NM_133509 RAD51B 0 . . . 8.31 86.41 25 4.87 No 44 1.92 Yes 0 0 No -24 0.8 Yes 42 55.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108177921 + NM_000051 ATM 0 . . . 3.51 81.49 26 5.86 Yes 55 0.85 Yes 0 0 No -18 0.7 Yes 13 8.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47722940 + NM_000251 MSH2 0 . . . 4.18 84.56 43 6.48 Yes 23 -1.99 No 0 0 No -20 0.55 No 49 81.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68954320 + NM_133509 RAD51B 0 . . . 5.34 88.46 36 6.58 Yes 52 1.47 Yes 0 0 No -35 0.89 Yes 49 88.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41216725 - NM_007294 BRCA1 0 . . . 2.5 78.29 40 11.25 Yes 6 0.79 Yes 0 0 No -39 0.86 Yes 39 54.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131947986 + NM_005732 RAD50 0 . . . 2.78 70.96 22 4.6 No 19 0.07 No 0 0 No -21 0.72 Yes 34 52.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32957377 + NM_000059 BRCA2 0 . . . 1.41 68.43 26 5.57 Yes 48 0.84 Yes 0 0 No -25 0.86 Yes 42 49.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59760485 - NM_032043 BRIP1 0 . . . 0.88 0 20 6.08 Yes 32 0.32 No 0 0 No -19 0.8 Yes 42 55.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75491918 - NM_001040108 MLH3 0 . . . 0.2 76.72 21 4.47 No 72 -5.91 No 0 0 No -44 0.55 No 33 59.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29095002 - NM_001005735 CHEK2 0 . . . 2.33 64.78 29 5.66 Yes 9 1.11 Yes 0 0 No -22 0.6 No 49 60.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29083259 - NM_001005735 CHEK2 0 . . . 0.13 64.53 27 5.06 No 29 0.65 No 0 0 No -29 0.86 Yes 50 21.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68834594 + NM_004360 CDH1 0 . . . 4.39 71.1 20 5.1 No 14 0.32 No 0 0 No -19 0.43 No 44 95.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131980643 + NM_005732 RAD50 0 . . . 4.77 85.22 16 4.74 No 74 1.19 Yes 0 0 No -26 0.84 Yes 55 39.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40985439 + NM_001164269 RAD51 0 . . . 0.24 0 25 5.39 No 38 1.35 Yes 0 0 No -22 0.81 Yes 20 66.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32960635 + NM_000059 BRCA2 0 . . . 3.91 73.16 22 4.9 No 59 0.82 Yes 0 0 No -21 0.65 No 44 67.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108222234 + NM_000051 ATM 0 . . . 0.62 0 25 4.51 No 9 0.4 No 0 0 No -24 0.74 Yes 55 42.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108193116 + NM_000051 ATM 0 . . . 5.74 82.31 15 5.28 No 58 1.2 Yes 0 0 No -30 0.35 No 43 68.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6038224 - NM_000535 PMS2 0 . . . 1.29 76.85 23 5 No 33 1.13 Yes 0 0 No -25 0.67 Yes 50 44.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47762951 + NM_000251 MSH2 0 . . . 1.44 80.32 15 4.58 No 27 0.61 No 0 0 No -56 0.32 No 47 64.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59860258 - NM_032043 BRIP1 0 . . . 4.95 78.12 38 6.07 Yes 62 0.75 No 0 0 No -31 0.67 Yes 45 56.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68308274 + NM_133509 RAD51B 0 . . . 6.66 63.67 17 4.47 No 46 0.98 Yes 0 0 No -16 0.82 Yes 12 55.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32967070 + NM_000059 BRCA2 0 . . . 4.48 71.08 21 5.1 No 32 1.02 Yes 0 0 No -20 0.69 Yes 26 82.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68790243 + NM_004360 CDH1 0 . . . 1.91 69.9 24 5.92 Yes 70 -2.86 No 0 0 No -23 0.58 No 53 26.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23624888 - NM_024675 PALB2 0 . . . 8.01 83.98 19 4.36 No 9 1.01 Yes 0 0 No -18 0.75 Yes 49 89.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59769980 - NM_032043 BRIP1 0 . . . 4.6 74.2 22 5.29 No -4 0.58 No 0 0 No -21 0.46 No 33 59.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68964516 + NM_133509 RAD51B 0 . . . 8.71 80.24 22 3.59 No 28 -1.12 No 0 0 No -21 0.7 Yes 44 73.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56790746 + NM_058216 RAD51C 0 . . . 5.4 86.84 27 5.23 No 70 0.6 No 0 0 No -29 0.43 No 44 41.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69106996 + NM_133509 RAD51B 0 . . . 1.65 64.05 42 6.35 Yes 71 -1.7 No 0 0 No -31 0.59 No 47 66.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47804378 + NM_000251 MSH2 0 . . . 0.17 0 18 5.91 Yes 53 0.52 No 0 0 No -22 0.53 No 39 69.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68285619 + NM_133509 RAD51B 0 . . . 2.85 0 37 5.56 Yes 9 0.6 No 0 0 No -42 0.55 No 43 56.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59818499 - NM_032043 BRIP1 0 . . . 0.04 0 50 8.81 Yes 76 -2.37 No 0 0 No -24 0.52 No 46 39.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104164096 - NM_001100119 XRCC3 0 . . . 2.26 83.2 26 5.33 No 5 0.67 No 0 0 No -26 0.63 No 45 80.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68343958 + NM_133509 RAD51B 0 . . . 3.93 74.02 19 4.9 No 1 0.99 Yes 0 0 No -18 0.61 No 45 59.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68478365 + NM_133509 RAD51B 0 . . . 2.46 83.66 18 4.45 No 76 0.91 Yes 0 0 No -17 0.57 No 51 66.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37044518 + NM_000249 MLH1 0 . . . 1.97 83.44 10 5.57 Yes 39 -2.1 No 0 0 No -17 0.4 No 47 95.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68473010 + NM_133509 RAD51B 0 . . . 2.83 64.03 44 8.05 Yes 8 0.63 No 0 0 No -27 0.66 No 39 54.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68396632 + NM_133509 RAD51B 0 . . . 3.72 71.51 20 4.77 No 15 0.93 Yes 0 0 No -19 0.72 Yes 43 72.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47721439 + NM_000251 MSH2 0 . . . 4.06 81.08 14 5.71 Yes 53 1.22 Yes 0 0 No -19 0.32 No 34 73.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37044345 + NM_000249 MLH1 0 . . . 5.01 79.96 21 5.85 Yes 8 0.8 Yes 0 0 No -31 0.55 No 46 62.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47710618 + NM_000251 MSH2 0 . . . 0.68 64.11 23 5.32 No 34 1.15 Yes 0 0 No -22 0.91 Yes 24 61.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59832598 - NM_032043 BRIP1 0 . . . 5.01 83.41 37 6.85 Yes 17 -3.14 No 0 0 No -36 0.94 Yes 45 71.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68535420 + NM_133509 RAD51B 0 . . . 6.32 78.04 9 3.87 No 32 0.72 No 0 0 No -29 0.57 No 46 45.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131896475 + NM_005732 RAD50 0 . . . 1.11 75.04 17 4.58 No 45 0.4 No 0 0 No -16 0.87 Yes 38 52.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68934178 + NM_133509 RAD51B 0 . . . 10.18 85.03 17 5.77 Yes 14 1.18 Yes 0 0 No -52 0.51 No 44 73.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89684709 + NM_000314 PTEN 0 . . . 6.47 78.06 19 5 No 59 1.02 Yes 0 0 No -18 0.83 Yes 45 50.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68508590 + NM_133509 RAD51B 0 . . . 8.07 87.29 21 4.05 No 72 0.97 Yes 0 0 No -24 0.63 No 35 46.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68902120 + NM_133509 RAD51B 0 . . . 6.96 91.83 31 6.5 Yes 37 0.84 Yes 0 0 No -31 0.7 Yes 50 49.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47765302 + NM_000251 MSH2 0 . . . 1.24 71.9 25 5.48 No 51 0.09 No 0 0 No -24 0.89 Yes 50 61.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89660486 + NM_000314 PTEN 0 . . . 8.31 80.23 27 4.87 No 50 1.14 Yes 0 0 No -51 0.65 No 43 64.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68796124 + NM_133509 RAD51B 0 . . . 4.97 74.9 24 4.74 No 53 -4.26 No 0 0 No -23 0.58 No 42 63.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37050792 + NM_000249 MLH1 0 . . . 7.84 76.93 18 4.69 No 0 1.72 Yes 0 0 No -19 0.69 Yes 46 80.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41226359 - NM_007294 BRCA1 0 . . . 1.97 80.73 48 6.08 Yes 11 0.61 No 0 0 No -36 0.32 No 47 89.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59908229 - NM_032043 BRIP1 0 . . . 4.94 75.1 22 4.8 No 0 0.95 Yes 0 0 No -21 0.52 No 50 74.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68846668 + NM_004360 CDH1 0 . . . 2.54 74.93 16 5.19 No 10 0.19 No 0 0 No -21 0.55 No 41 44.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207144 - NM_007294 BRCA1 0 . . . 4.25 79.32 25 5.1 No 59 1.77 Yes 0 0 No -24 0.84 Yes 52 78.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69087260 + NM_133509 RAD51B 0 . . . 5.91 72.71 18 4.7 No 8 2.4 Yes 0 0 No -21 0.41 No 43 67.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108226559 + NM_000051 ATM 0 . . . 1.97 67.18 34 6.32 Yes 38 -3.95 No 0 0 No -31 0.42 No 46 54.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68748652 + NM_133509 RAD51B 0 . . . 1.03 68.86 22 5.28 No 72 1.57 Yes 0 0 No -33 0.49 No 44 74.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68442259 + NM_133509 RAD51B 0 . . . 0.38 65.18 21 6.95 Yes 74 0.8 Yes 0 0 No -28 0.75 Yes 49 68.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21966072 - NM_000077 CDKN2A 0 . . . 11.3 91.42 13 4.45 No 51 0.88 Yes 0 0 No -58 0.33 No 27 77.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131907290 + NM_005732 RAD50 0 . . . 2.86 67.29 24 5.48 No 47 0.35 No 0 0 No -23 0.76 Yes 49 50.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94171464 - NM_005591 MRE11 0 . . . 5.47 91.13 43 5.67 Yes 44 -1.99 No 0 0 No -40 0.5 No 45 89.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47633044 + NM_000251 MSH2 0 . . . 8.2 79.54 24 7.03 Yes 71 0.15 No 0 0 No -23 0.8 Yes 41 66.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68698580 + NM_133509 RAD51B 0 . . . 0.09 70.32 22 5.29 No 73 -6.06 No 0 0 No -21 0.56 No 55 43.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59887875 - NM_032043 BRIP1 0 . . . 1.69 66.8 13 4.92 No 71 -5.52 No 0 0 No -26 0.62 No 46 93.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215647989 - NM_000465 BARD1 0 . . . 4.45 76 20 5.16 No 55 0.27 No 0 0 No -19 0.47 No 50 57.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69002507 + NM_133509 RAD51B 0 . . . 4.37 74.96 12 5.39 No 66 -4.31 No 0 0 No -22 0.29 No 50 63.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68805535 + NM_004360 CDH1 0 . . . 1.74 65.89 29 3.63 No 47 0.64 No 0 0 No -29 0.63 No 42 57.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68452866 + NM_133509 RAD51B 0 . . . 3.32 78 16 4.58 No 26 0.4 No 0 0 No -15 0.43 No 45 59.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23629674 - NM_024675 PALB2 0 . . . 0.53 70.18 26 5.09 No 36 0.62 No 0 0 No -25 0.81 Yes 41 80.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68375413 + NM_133509 RAD51B 0 . . . 0.55 67.63 19 5.47 No 47 -2.21 No 0 0 No -21 0.74 Yes 43 69.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89638547 + NM_000314 PTEN 0 . . . 0.06 81.4 36 4.22 No 41 -3.73 No 0 0 No -30 0.88 Yes 45 34.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47636604 + NM_000251 MSH2 0 . . . 3.43 71.84 39 7.72 Yes 3 2.05 Yes 0 0 No -38 0.76 Yes 42 90.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37048263 + NM_000249 MLH1 0 . . . 5.38 85.09 18 5.54 No 10 0.2 No 0 0 No -25 0.71 Yes 48 58.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59879451 - NM_032043 BRIP1 0 . . . 2.43 64.2 18 4.16 No 71 -2.8 No 0 0 No -37 0.26 No 52 31.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41217823 - NM_007294 BRCA1 0 . . . 2.43 74.85 20 5.1 No 0 0.29 No 0 0 No -19 0.87 Yes 48 57.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1227479 + NM_000455 STK11 0 . . . 9.43 86.73 22 5.27 No 30 0.94 Yes 0 0 No -40 0.75 Yes 28 71.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68804995 + NM_133509 RAD51B 0 . . . 2.67 87.08 25 5.84 Yes 71 -4.24 No 0 0 No -28 0.77 Yes 50 68.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190709934 + NM_000534 PMS1 0 . . . 7.08 83.27 22 4.84 No 37 0.49 No 0 0 No -21 0.7 Yes 47 81.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59942699 - NM_032043 BRIP1 0 . . . 8.12 80.56 21 5.02 No 36 0.56 No 0 0 No -44 0.64 No 46 60.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497337 + NM_133509 RAD51B 0 . . . 8.32 85.31 17 3.91 No 0 0.37 No 0 0 No -52 0.57 No 35 70.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59900689 - NM_032043 BRIP1 0 . . . 0.87 65.99 20 5.09 No 68 0.83 Yes 0 0 No -20 0.75 Yes 47 67.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6039702 - NM_000535 PMS2 0 . . . 4.42 74.38 18 7 Yes 1 1.65 Yes 0 0 No -17 0.59 No 52 45.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29120320 - NM_001005735 CHEK2 0 . . . 4.01 81.91 29 5.17 No 9 1.51 Yes 0 0 No -28 0.76 Yes 49 94.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190707764 + NM_000534 PMS1 0 . . . 7.57 83.64 13 5.29 No 4 0.2 No 0 0 No -25 0.65 No 41 41.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45806708 - NM_001048171 MUTYH 0 . . . 1.66 79.74 22 7.08 Yes 7 0.66 No 0 0 No -21 0.95 Yes 51 63.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69030322 + NM_133509 RAD51B 0 . . . 10.18 84.09 19 5 No 62 1.08 Yes 0 0 No -18 0.61 No 44 72.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89637708 + NM_000314 PTEN 0 . . . 4.98 77.9 16 4.15 No 39 -1.86 No 0 0 No -46 0.4 No 42 77.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152357517 - NM_005431 XRCC2 0 . . . 1.88 79.4 9 6.08 Yes 40 1.74 Yes 0 0 No -31 0.43 No 49 95.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29127557 - NM_001005735 CHEK2 0 . . . 3.67 84 15 5.2 No 2 1.5 Yes 0 0 No -28 0.71 Yes 21 63.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131946620 + NM_005732 RAD50 0 . . . 9.02 89.42 12 5.1 No 4 1.77 Yes 0 0 No -45 0.3 No 46 80.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41277288 - NM_007294 BRCA1 0 . . . 4.62 73.17 17 5.05 No 8 1.24 Yes 0 0 No -16 0.38 No 39 89.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68828684 + NM_004360 CDH1 0 . . . 2.19 82.25 32 6.56 Yes 9 0.98 Yes 0 0 No -28 0.35 No 49 85.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152369909 - NM_005431 XRCC2 0 . . . 2.61 76.66 17 4 No 73 -3.82 No 0 0 No -28 0.36 No 49 47.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59904573 - NM_032043 BRIP1 0 . . . 6.32 74.56 13 3.99 No 76 1.86 Yes 0 0 No -12 0.25 No 43 65.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21968072 - NM_000077 CDKN2A 0 . . . 7.98 74.34 16 5.57 Yes 29 -2.17 No 0 0 No -33 0.81 Yes 45 33.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68381239 + NM_133509 RAD51B 0 . . . 10.12 82.23 32 6.16 Yes 29 1.34 Yes 0 0 No -52 0.72 Yes 39 96.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90964415 - NM_002485 NBN 0 . . . 4.07 71.85 28 5.38 No 30 0.46 No 0 0 No -42 0.45 No 46 49.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21985740 - NM_000077 CDKN2A 0 . . . 6.77 72.52 51 6.97 Yes 60 -2.32 No 0 0 No -45 0.53 No 43 65.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108195106 + NM_000051 ATM 0 . . . 0.77 73.4 26 5.48 No 12 0.47 No 0 0 No -25 0.86 Yes 46 59.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105195062 + NM_021930 RINT1 0 . . . 3.67 75.88 42 7.28 Yes -2 1.1 Yes 0 0 No -41 0.74 Yes 48 63.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68870726 + NM_133509 RAD51B 0 . . . 2.56 67.29 72 7.46 Yes -3 0.29 No 0 0 No -23 0.44 No 61 54.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68751270 + NM_133509 RAD51B 0 . . . 4.49 80.77 23 4.9 No 14 2.15 Yes 0 0 No -23 0.59 No 44 86.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89712955 + NM_000314 PTEN 0 . . . 1.28 65.56 13 4 No 34 1.48 Yes 0 0 No -36 0.69 Yes 20 71.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68759344 + NM_133509 RAD51B 0 . . . 5.44 90.07 20 5.57 Yes 24 0.88 Yes 0 0 No -19 0.69 Yes 49 70.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131976043 + NM_005732 RAD50 0 . . . 2.54 78.12 27 6.08 Yes 66 1.39 Yes 0 0 No -26 0.76 Yes 49 82.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1211245 + NM_000455 STK11 0 . . . 4.22 89.81 26 5.23 No 59 -3.88 No 0 0 No -25 0.65 No 55 53.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41202603 - NM_007294 BRCA1 0 . . . 2.23 90.11 23 3.54 No 40 1.45 Yes 0 0 No -22 0.76 Yes 19 70.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108211994 + NM_000051 ATM 0 . . . 2.98 75.11 17 5.81 Yes 40 0.52 No 0 0 No -19 0.44 No 41 28.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37086443 + NM_000249 MLH1 0 . . . 0.76 74.36 71 9.32 Yes 62 0.5 No 0 0 No -28 0.56 No 37 63.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68450029 + NM_133509 RAD51B 0 . . . 4.51 73.96 39 6.16 Yes 10 0.74 No 0 0 No -28 0.55 No 41 50.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152353445 - NM_005431 XRCC2 0 . . . 5.77 76.6 25 5.29 No 2 1.07 Yes 0 0 No -24 0.75 Yes 46 45.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215636259 - NM_000465 BARD1 0 . . . 1.64 67.36 19 6.48 Yes 33 1.15 Yes 0 0 No -35 0.62 No 25 51.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89648680 + NM_000314 PTEN 0 . . . 2.69 58.19 31 5.43 No 41 1.08 Yes 0 0 No -30 0.89 Yes 46 53.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23639062 - NM_024675 PALB2 0 . . . 2.05 53.22 17 6.93 Yes 52 0.93 Yes 0 0 No -29 0.4 No 46 52.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23647746 - NM_024675 PALB2 0 . . . 1.43 55.56 28 5.3 No 12 1.53 Yes 0 0 No -26 0.51 No 42 67.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69028540 + NM_133509 RAD51B 0 . . . 2.06 68.25 24 4.39 No 56 0.58 No 0 0 No -23 0.59 No 41 39.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32974955 + NM_000059 BRCA2 0 . . . 0.66 62.39 21 5.2 No 76 0.31 No 0 0 No -20 0.68 Yes 47 37.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41258652 - NM_007294 BRCA1 0 . . . 5.18 68.56 49 8.04 Yes 19 1.12 Yes 0 0 No -49 0.51 No 39 94.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90959071 - NM_002485 NBN 0 . . . 0.2 65.3 24 5.48 No 68 -6.14 No 0 0 No -23 0.93 Yes 55 42.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68504344 + NM_133509 RAD51B 0 . . . 4.66 72.96 30 5.48 No 16 0.39 No 0 0 No -30 0.35 No 46 67.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32902026 + NM_000059 BRCA2 0 . . . 8.17 81.84 23 5.29 No 5 1.02 Yes 0 0 No -23 0.7 Yes 48 87.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108171560 + NM_000051 ATM 0 . . . 6.14 75.9 17 4.67 No 62 0.31 No 0 0 No -23 0.65 No 32 45.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32971134 + NM_000059 BRCA2 0 . . . 0.82 0 15 4.86 No 66 -4.6 No 0 0 No -26 0.63 No 51 36.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47720392 + NM_000251 MSH2 0 . . . 7.28 79.65 22 4.21 No 16 1.1 Yes 0 0 No -15 0.64 No 39 70.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48035107 + NM_000179 MSH6 0 . . . 6 83.68 20 5.72 Yes 19 0.71 No 0 0 No -19 0.83 Yes 46 54.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68807752 + NM_133509 RAD51B 0 . . . 2.22 74 24 5.48 No 39 1.43 Yes 0 0 No -34 0.67 Yes 49 35.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108209991 + NM_000051 ATM 0 . . . 3.77 86.14 22 5.74 Yes 46 -2.78 No 0 0 No -21 0.8 Yes 49 72.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48032100 + NM_000179 MSH6 0 . . . 2.21 70.35 11 5 No 3 0.38 No 0 0 No -43 0.64 No 45 36.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45796028 - NM_001048171 MUTYH 0 . . . 5.55 77.31 34 5.31 No 17 0.84 Yes 0 0 No -33 0.5 No 41 92.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23627032 - NM_024675 PALB2 0 . . . 3.58 80.22 32 6.85 Yes 67 -4.96 No 0 0 No -31 0.81 Yes 48 54.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69143776 + NM_133509 RAD51B 0 . . . 9.16 71.75 29 5.92 Yes 34 -1.8 No 0 0 No -28 0.77 Yes 51 52.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68459394 + NM_133509 RAD51B 0 . . . 2.19 77.95 25 5.56 Yes 19 -1.55 No 0 0 No -24 0.95 Yes 42 51.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68399636 + NM_133509 RAD51B 0 . . . 2.33 62.42 22 5.1 No 49 -1.18 No 0 0 No -21 0.5 No 32 32.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75507402 - NM_001040108 MLH3 0 . . . 8.89 86.81 36 8.53 Yes 75 0.34 No 0 0 No -35 0.64 No 40 98.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89633673 + NM_000314 PTEN 0 . . . 3.48 70.34 47 6.78 Yes 36 1.25 Yes 0 0 No -26 0.46 No 44 73.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68657216 + NM_133509 RAD51B 0 . . . 4.99 78.95 23 4.85 No 76 -4.02 No 0 0 No -22 0.76 Yes 47 36.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108121141 + NM_000051 ATM 0 . . . 3.68 70.85 33 5.83 Yes 21 1.72 Yes 0 0 No -35 0.43 No 37 83.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29088862 - NM_001005735 CHEK2 0 . . . 3.94 69.54 24 4.78 No 54 -2.74 No 0 0 No -43 0.61 No 46 32.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108155940 + NM_000051 ATM 0 . . . 3.11 83.65 20 4.9 No 20 1.25 Yes 0 0 No -32 0.4 No 50 62.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68440477 + NM_133509 RAD51B 0 . . . 1.99 76.2 24 6.4 Yes 19 -2 No 0 0 No -23 0.9 Yes 51 75.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215605136 - NM_000465 BARD1 0 . . . 0.94 0 27 5.1 No 58 0.32 No 0 0 No -26 0.88 Yes 50 36.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47638635 + NM_000251 MSH2 0 . . . 5.26 81.57 17 5.29 No 45 1.91 Yes 0 0 No -16 0.68 Yes 46 61.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59857233 - NM_032043 BRIP1 0 . . . 4.87 69.31 130 8.22 Yes 1 1.4 Yes 0 0 No -25 0.71 Yes 47 91.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68410143 + NM_133509 RAD51B 0 . . . 1.35 79.59 16 5.34 No 13 1.29 Yes 0 0 No -30 0.57 No 45 87.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68566016 + NM_133509 RAD51B 0 . . . 0.05 0 14 5.02 No 73 -3.77 No 0 0 No -24 0.73 Yes 47 62.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6015766 - NM_000535 PMS2 0 . . . 1.08 84.22 18 4.9 No 33 0.98 Yes 0 0 No -19 0.76 Yes 25 39.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68785956 + NM_004360 CDH1 0 . . . 2.61 66.46 26 5.66 Yes 16 1.09 Yes 0 0 No -25 0.82 Yes 42 87.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68740658 + NM_133509 RAD51B 0 . . . 6.42 89.77 17 3.74 No 52 1.51 Yes 0 0 No -17 0.3 No 35 62.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40986234 + NM_001164269 RAD51 0 . . . 3.11 70.6 19 5.39 No 9 0.89 Yes 0 0 No -22 0.62 No 46 92.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47704319 + NM_000251 MSH2 0 . . . 3.47 85.85 20 5.79 Yes 2 1.57 Yes 0 0 No -24 0.69 Yes 56 41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69122561 + NM_133509 RAD51B 0 . . . 8.16 76.81 13 4.79 No 43 -0.99 No 0 0 No -21 0.82 Yes 36 97.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152352791 - NM_005431 XRCC2 0 . . . 2.31 0 44 5.27 No 72 0.74 No 0 0 No -24 0.93 Yes 43 78.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108093870 + NM_000051 ATM 0 . . . 2.31 76.72 10 4.63 No 48 -2.19 No 0 0 No -34 0.57 No 50 24.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68919351 + NM_133509 RAD51B 0 . . . 3.8 68.32 26 5.45 No -3 1.87 Yes 0 0 No -43 0.63 No 52 33.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68668041 + NM_133509 RAD51B 0 . . . 0.69 70.05 34 7.64 Yes 53 0.22 No 0 0 No -33 0.38 No 48 54.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41207609 - NM_007294 BRCA1 0 . . . 0.11 71.42 24 5.2 No 19 -3.39 No 0 0 No -41 0.66 No 40 46.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190724372 + NM_000534 PMS1 0 . . . 1.17 65.79 15 4.96 No 48 0.35 No 0 0 No -24 0.54 No 44 87.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68734852 + NM_133509 RAD51B 0 . . . 3.38 73.32 25 4.63 No 37 1.69 Yes 0 0 No -24 0.51 No 54 31.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68330459 + NM_133509 RAD51B 0 . . . 0.43 55.56 21 5.2 No 1 0.36 No 0 0 No -20 0.87 Yes 57 40.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84398246 - NM_139076 FAM175A 0 . . . 3.57 79.09 22 5 No 62 -4.38 No 0 0 No -21 0.64 No 45 60.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69089174 + NM_133509 RAD51B 0 . . . 0.65 77.79 15 5.39 No 55 -2.35 No 0 0 No -51 0.56 No 46 53.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90954137 - NM_002485 NBN 0 . . . 4.44 88.72 50 6.99 Yes 61 1.82 Yes 0 0 No -49 0.52 No 45 93.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89706289 + NM_000314 PTEN 0 . . . 2.66 78.57 26 6.19 Yes 8 0.46 No 0 0 No -25 0.7 Yes 47 86.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41260983 - NM_007294 BRCA1 0 . . . 5.5 90.92 26 6.48 Yes 15 -0.35 No 0 0 No -25 0.79 Yes 43 59.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47688212 + NM_000251 MSH2 0 . . . 4.95 72.39 23 4.77 No 15 1.84 Yes 0 0 No -22 0.5 No 43 93.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59836935 - NM_032043 BRIP1 0 . . . 6.09 70.27 15 5.6 Yes 72 1.23 Yes 0 0 No -15 0.36 No 44 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68336589 + NM_133509 RAD51B 0 . . . 1.86 74.66 26 5.28 No 40 -3.65 No 0 0 No -25 0.83 Yes 46 74.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7566831 - NM_000546 TP53 0 . . . 3.46 84.95 19 4.49 No 57 1.81 Yes 0 0 No -24 0.55 No 12 83.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33437363 - NM_002878 RAD51D 0 . . . 0.59 73.12 24 5.14 No 41 -3.57 No 0 0 No -26 0.52 No 50 48.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68693087 + NM_133509 RAD51B 0 . . . 8.39 80.58 25 6.24 Yes 43 0.84 Yes 0 0 No -22 0.69 Yes 54 57.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68527947 + NM_133509 RAD51B 0 . . . 0.16 68.26 22 5.1 No 40 1.34 Yes 0 0 No -44 0.73 Yes 49 57.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108146216 + NM_000051 ATM 0 . . . 5.23 86.04 20 4.61 No 65 1.88 Yes 0 0 No -19 0.92 Yes 48 77.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59798666 - NM_032043 BRIP1 0 . . . 2.83 69.66 19 3.89 No 69 -4.58 No 0 0 No -26 0.83 Yes 52 32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68835059 + NM_004360 CDH1 0 . . . 3.46 84.95 25 4.72 No 57 0.94 Yes 0 0 No -28 0.55 No 22 75.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215597807 - NM_000465 BARD1 0 . . . 8.09 79.59 18 4.9 No 45 0.99 Yes 0 0 No -23 0.76 Yes 33 69.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108092179 + NM_000051 ATM 0 . . . 2.66 66.6 28 6.43 Yes 2 0.79 Yes 0 0 No -23 0.61 No 45 90.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47660683 + NM_000251 MSH2 0 . . . 4.82 82.75 23 7.24 Yes 50 2.24 Yes 0 0 No -28 0.77 Yes 46 30.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68325423 + NM_133509 RAD51B 0 . . . 1.41 68.5 21 4.58 No 68 -2.82 No 0 0 No -20 0.45 No 43 58.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89726741 + NM_000314 PTEN 0 . . . 0.57 0 51 5.46 No 26 0.72 No 0 0 No -39 0.61 No 44 74.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68388887 + NM_133509 RAD51B 0 . . . 3.83 77.92 37 6.54 Yes 38 0.78 Yes 0 0 No -39 0.47 No 45 59.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29109322 - NM_001005735 CHEK2 0 . . . 1.16 73.64 17 6.93 Yes 48 0.87 Yes 0 0 No -16 0.44 No 51 32.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68353158 + NM_133509 RAD51B 0 . . . 2.28 69.46 88 8.07 Yes 28 0.43 No 0 0 No -24 0.47 No 54 35.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68296280 + NM_133509 RAD51B 0 . . . 7.88 85.81 17 5.06 No 71 0.67 No 0 0 No -23 0.42 No 52 66.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215624951 - NM_000465 BARD1 0 . . . 1.37 60.34 29 5.74 Yes 27 0.13 No 0 0 No -50 0.68 Yes 46 36.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68916313 + NM_133509 RAD51B 0 . . . 1.03 0 21 4.62 No 32 0.03 No 0 0 No -22 0.64 No 57 47.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68396166 + NM_133509 RAD51B 0 . . . 2.5 68.88 19 5 No 18 0.88 Yes 0 0 No -19 0.27 No 46 69.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56806977 + NM_058216 RAD51C 0 . . . 3.67 84 15 4.25 No 2 1.5 Yes 0 0 No -25 0.54 No 12 57.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75485920 - NM_001040108 MLH3 0 . . . 1.19 74.26 15 4.59 No 33 1.16 Yes 0 0 No -26 0.63 No 25 40.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105207798 + NM_021930 RINT1 0 . . . 5.94 83.14 14 4.47 No 29 0.86 Yes 0 0 No -32 0.47 No 38 73.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59788994 - NM_032043 BRIP1 0 . . . 3.87 90.57 17 4.78 No 75 1.17 Yes 0 0 No -20 0.88 Yes 50 89.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69046634 + NM_133509 RAD51B 0 . . . 2.2 0 25 5.22 No 21 0.35 No 0 0 No -25 0.41 No 45 54.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108108698 + NM_000051 ATM 0 . . . 4.12 87.85 24 4.86 No 67 0.76 No 0 0 No -23 0.45 No 44 37.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29131566 - NM_001005735 CHEK2 0 . . . 5.18 76.67 34 4.78 No 71 0.77 Yes 0 0 No -28 0.44 No 40 67.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215623956 - NM_000465 BARD1 0 . . . 4.74 84.44 51 5.57 Yes 5 1.14 Yes 0 0 No -30 0.7 Yes 53 68.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84385313 - NM_139076 FAM175A 0 . . . 3.08 84 35 7.21 Yes 67 1.93 Yes 0 0 No -34 0.35 No 18 80.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190724959 + NM_000534 PMS1 0 . . . 3.3 75.98 12 3.61 No 2 1.24 Yes 0 0 No -26 0.76 Yes 38 81.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68646563 + NM_133509 RAD51B 0 . . . 1.82 70.67 35 6.08 Yes 73 -5.18 No 0 0 No -34 0.4 No 35 58.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68792090 + NM_004360 CDH1 0 . . . 5.66 80.19 32 6.08 Yes 40 0.38 No 0 0 No -25 0.52 No 18 65.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190735857 + NM_000534 PMS1 0 . . . 5.08 77.12 13 5 No 27 0.92 Yes 0 0 No -18 0.74 Yes 36 53.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108153180 + NM_000051 ATM 0 . . . 5.66 76.02 33 6.27 Yes 2 0.77 Yes 0 0 No -24 0.87 Yes 50 71.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68707036 + NM_133509 RAD51B 0 . . . 5.88 85.72 28 5.38 No 8 0.72 No 0 0 No -27 0.76 Yes 42 63.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37073193 + NM_000249 MLH1 0 . . . 1.9 74.02 29 5.79 Yes 68 0.13 No 0 0 No -28 0.81 Yes 37 83.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68957026 + NM_133509 RAD51B 0 . . . 2.74 68.48 36 6.1 Yes 26 0.42 No 0 0 No -32 0.34 No 32 74.21 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68356394 + NM_133509 RAD51B 0 . . . 2.42 62.97 19 6.66 Yes 27 0.98 Yes 0 0 No -18 0.8 Yes 36 63.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59939824 - NM_032043 BRIP1 0 . . . 2.33 0 18 6.31 Yes 17 0.7 No 0 0 No -26 0.77 Yes 36 49.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59809646 - NM_032043 BRIP1 0 . . . 1 68.33 34 5.67 Yes 72 -5.46 No 0 0 No -33 0.49 No 47 59.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68411309 + NM_133509 RAD51B 0 . . . 4.94 67.34 32 6.16 Yes 14 0.85 Yes 0 0 No -31 0.58 No 44 88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94149652 - NM_005591 MRE11 0 . . . 4.01 85.49 10 5.29 No 50 -4.36 No 0 0 No -21 0.75 Yes 48 68.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68540366 + NM_133509 RAD51B 0 . . . 1.78 78.66 11 4.58 No 28 -1.32 No 0 0 No -38 0.25 No 50 64.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89625068 + NM_000314 PTEN 0 . . . 1.5 79.29 23 5.75 Yes 44 0.59 No 0 0 No -27 0.4 No 45 42.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215622745 - NM_000465 BARD1 0 . . . 4.02 68.38 21 5.1 No 24 1.38 Yes 0 0 No -20 0.32 No 34 90.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52441238 - NM_004656 BAP1 0 . . . 5.53 85.87 32 5.66 Yes 60 -1.65 No 0 0 No -31 0.61 No 51 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68851378 + NM_133509 RAD51B 0 . . . 0.69 74.82 21 4.69 No 15 0.95 Yes 0 0 No -20 0.93 Yes 43 73.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6024170 - NM_000535 PMS2 0 . . . 6.44 75.99 14 4.8 No 13 0.8 Yes 0 0 No -26 0.61 No 40 74.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69089738 + NM_133509 RAD51B 0 . . . 7.74 84.15 29 4.35 No 5 0.87 Yes 0 0 No -22 0.78 Yes 53 68.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131931897 + NM_005732 RAD50 0 . . . 0.27 74.73 18 4.84 No 34 0.89 Yes 0 0 No -41 0.54 No 24 51.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131944141 + NM_005732 RAD50 0 . . . 5.85 73.92 20 5.57 Yes 36 1.13 Yes 0 0 No -19 0.66 Yes 36 61.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68684905 + NM_133509 RAD51B 0 . . . 4.71 87.45 94 10.27 Yes 4 1.06 Yes 0 0 No -28 0.46 No 46 92.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6012871 - NM_000535 PMS2 0 . . . 3.6 82.81 15 5.55 No 57 0.4 No 0 0 No -24 0.74 Yes 46 88.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47661063 + NM_000251 MSH2 0 . . . 4.25 83.26 16 4.69 No -3 0.37 No 0 0 No -40 0.85 Yes 50 24.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69101530 + NM_133509 RAD51B 0 . . . 0.73 81.7 22 5.84 Yes 72 -2.11 No 0 0 No -26 0.33 No 46 49.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108172960 + NM_000051 ATM 0 . . . 3.41 62.9 46 6.77 Yes 70 -3.14 No 0 0 No -33 0.52 No 31 85.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41259650 - NM_007294 BRCA1 0 . . . 0.32 74.68 28 5.48 No 76 0.59 No 0 0 No -27 0.79 Yes 54 78.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108199296 + NM_000051 ATM 0 . . . 3.93 68.33 52 5.54 No 10 1.3 Yes 0 0 No -23 0.85 Yes 48 67.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23643461 - NM_024675 PALB2 0 . . . 5.74 75.77 29 5.92 Yes -1 0.8 Yes 0 0 No -28 0.69 Yes 53 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69034747 + NM_133509 RAD51B 0 . . . 4.84 77.25 87 9.04 Yes 67 -2.18 No 0 0 No -30 0.32 No 49 84.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68666200 + NM_133509 RAD51B 0 . . . 6.37 87.61 22 6.32 Yes 69 1.2 Yes 0 0 No -21 0.6 No 43 53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68389019 + NM_133509 RAD51B 0 . . . 9.5 79.93 16 5.29 No 9 0.68 No 0 0 No -21 0.62 No 49 77.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1209917 + NM_000455 STK11 0 . . . 3.37 75.27 17 3.8 No NA NA NA 0 0 No -32 0.75 Yes 51 62.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68393302 + NM_133509 RAD51B 0 . . . 4.78 84.41 29 7.35 Yes 30 0.74 No 0 0 No -28 0.95 Yes 28 54.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68874299 + NM_133509 RAD51B 0 . . . 2.41 77.47 76 10.34 Yes 72 0.08 No 0 0 No -26 0.9 Yes 46 95.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68975437 + NM_133509 RAD51B 0 . . . 1.84 0 24 5.8 Yes -3 -0.59 No 0 0 No -23 0.71 Yes 53 74.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41243948 - NM_007294 BRCA1 0 . . . 3.97 79 24 4.09 No 57 -2.95 No 0 0 No -19 0.76 Yes 49 64.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69096112 + NM_133509 RAD51B 0 . . . 10.28 88 24 4.97 No 32 -0.47 No 0 0 No -23 0.61 No 41 88.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47639055 + NM_000251 MSH2 0 . . . 0.24 58.43 27 4.46 No 60 0.4 No 0 0 No -26 0.7 Yes 42 96.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108163405 + NM_000051 ATM 0 . . . 2.85 67.39 18 4.27 No 21 0.33 No 0 0 No -24 0.79 Yes 37 74.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68451747 + NM_133509 RAD51B 0 . . . 2.79 66.72 44 7.07 Yes 18 0.72 No 0 0 No -44 0.47 No 40 95.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68444259 + NM_133509 RAD51B 0 . . . 3.44 75.97 16 4.68 No -4 1.56 Yes 0 0 No -18 0.52 No 52 71.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29114624 - NM_001005735 CHEK2 0 . . . 2.73 68.34 24 5.1 No 23 0.62 No 0 0 No -23 0.92 Yes 40 79.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29129074 - NM_001005735 CHEK2 0 . . . 4.42 83.81 36 6.08 Yes 64 1.9 Yes 0 0 No -35 0.5 No 44 41.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84398927 - NM_139076 FAM175A 0 . . . 6.02 84 17 5.48 No 35 0.76 No 0 0 No -23 0.27 No 36 82.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108233410 + NM_000051 ATM 0 . . . 0.65 78.44 9 5.83 Yes 35 0.49 No 0 0 No -30 0.66 No 48 49.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68766185 + NM_133509 RAD51B 0 . . . 3.92 73 31 5.71 Yes 68 0.98 Yes 0 0 No -30 0.79 Yes 49 79.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68287026 + NM_133509 RAD51B 0 . . . 2.92 0 24 5.39 No 12 0.21 No 0 0 No -23 0.77 Yes 46 72.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68638880 + NM_133509 RAD51B 0 . . . 6.99 81.94 15 5.39 No 45 0.62 No 0 0 No -24 0.25 No 48 88.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89635497 + NM_000314 PTEN 0 . . . 3.05 76.24 26 4.02 No 64 0.17 No 0 0 No -25 0.44 No 45 39.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105203453 + NM_021930 RINT1 0 . . . 3.03 69.12 23 5.39 No 42 0.42 No 0 0 No -22 0.91 Yes 53 40.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68920687 + NM_133509 RAD51B 0 . . . 3.77 83.91 24 4.9 No 2 0.12 No 0 0 No -23 0.84 Yes 48 87.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47721483 + NM_000251 MSH2 0 . . . 4.8 69.48 21 5 No 13 0.87 Yes 0 0 No -20 0.88 Yes 45 92.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68781732 + NM_133509 RAD51B 0 . . . 1.48 77.78 18 5.33 No -1 1.31 Yes 0 0 No -27 0.71 Yes 46 40.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131891289 + NM_005732 RAD50 0 . . . 0.39 61.67 48 6.58 Yes -4 0.7 No 0 0 No -42 0.74 Yes 62 43.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131910446 + NM_005732 RAD50 0 . . . 5.79 90.21 35 5.47 No 21 0.39 No 0 0 No -22 0.66 No 52 68.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68897547 + NM_133509 RAD51B 0 . . . 6.38 80.98 30 5.92 Yes 61 -2.05 No 0 0 No -28 0.72 Yes 43 80.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68327790 + NM_133509 RAD51B 0 . . . 5.49 71.75 24 5.92 Yes 2 1.16 Yes 0 0 No -23 0.85 Yes 42 50.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68855061 + NM_004360 CDH1 0 . . . 4.2 70.67 36 5.23 No 43 -0.3 No 0 0 No -27 0.65 No 45 69.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68763233 + NM_133509 RAD51B 0 . . . 9.15 88.93 17 6.46 Yes 5 1.2 Yes 0 0 No -23 0.8 Yes 46 84.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108108297 + NM_000051 ATM 0 . . . 2.58 82.75 20 5.57 Yes 58 2.14 Yes 0 0 No -19 0.68 Yes 51 58.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32957468 + NM_000059 BRCA2 0 . . . 1.99 78.46 54 7.76 Yes 75 -4.81 No 0 0 No -22 0.68 Yes 48 75.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105208552 + NM_021930 RINT1 0 . . . 5.11 77.26 18 5.47 No 38 0.87 Yes 0 0 No -27 0.89 Yes 20 61.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68519696 + NM_133509 RAD51B 0 . . . 9.94 76.13 23 5.98 Yes 4 0.57 No 0 0 No -22 0.9 Yes 43 58.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94219120 - NM_005591 MRE11 0 . . . 1.36 77.68 18 6.04 Yes 39 -4.25 No 0 0 No -25 0.53 No 42 44.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190739480 + NM_000534 PMS1 0 . . . 8.28 77.48 35 6.4 Yes 8 1.26 Yes 0 0 No -34 0.74 Yes 46 90.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68771663 + NM_133509 RAD51B 0 . . . 3.17 70.82 43 8.09 Yes 12 0.59 No 0 0 No -45 0.57 No 32 91.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68737924 + NM_133509 RAD51B 0 . . . 0.22 75.4 30 5.52 No 56 1.17 Yes 0 0 No -29 0.42 No 21 67.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69035655 + NM_133509 RAD51B 0 . . . 5.93 78.26 15 5.08 No 61 -2.34 No 0 0 No -22 0.57 No 47 68.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68453041 + NM_133509 RAD51B 0 . . . 2.75 77.14 34 5.83 Yes -4 0.5 No 0 0 No -33 0.88 Yes 47 50.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108196536 + NM_000051 ATM 0 . . . 0.2 67.79 26 5.62 Yes 51 0.95 Yes 0 0 No -30 0.82 Yes 49 55.18 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68811868 + NM_133509 RAD51B 0 . . . 2 76.77 28 5.48 No 37 1.03 Yes 0 0 No -27 0.8 Yes 45 38.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68930078 + NM_133509 RAD51B 0 . . . 1.63 68.42 24 4.83 No 24 1.05 Yes 0 0 No -21 0.42 No 50 31.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68813915 + NM_133509 RAD51B 0 . . . 6.22 74.16 42 6.24 Yes -4 0.58 No 0 0 No -30 0.49 No 37 67.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56804170 + NM_058216 RAD51C 0 . . . 6.65 79.41 23 5.29 No 14 0.27 No 0 0 No -22 0.59 No 44 81.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7573880 - NM_000546 TP53 0 . . . 10 80 21 5.1 No 28 1.99 Yes 0 0 No -20 0.64 No 30 87.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68974533 + NM_133509 RAD51B 0 . . . 4.03 75.08 20 5.03 No 27 0.3 No 0 0 No -19 0.76 Yes 44 83.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7575624 - NM_000546 TP53 0 . . . 2.63 68.36 32 6.15 Yes 59 1.46 Yes 0 0 No -31 0.72 Yes 42 92.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47720663 + NM_000251 MSH2 0 . . . 0.31 0 34 7.07 Yes 34 -1.99 No 0 0 No -33 0.61 No 45 46.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68314836 + NM_133509 RAD51B 0 . . . 1.99 73.75 37 7.31 Yes 16 1.26 Yes 0 0 No -54 0.73 Yes 42 95.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89720510 + NM_000314 PTEN 0 . . . 7.38 87.88 16 4.69 No 0 0.53 No 0 0 No -42 0.68 Yes 40 73.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215659804 - NM_000465 BARD1 0 . . . 5.61 69.94 32 9.36 Yes 75 1.12 Yes 0 0 No -31 0.84 Yes 37 61.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47743452 + NM_000251 MSH2 0 . . . 4.03 66.9 17 4.8 No 55 0.82 Yes 0 0 No -22 0.42 No 39 38.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105209799 + NM_021930 RINT1 0 . . . 0.92 79.86 20 5.09 No 54 -4.55 No 0 0 No -37 0.39 No 46 45.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59939700 - NM_032043 BRIP1 0 . . . 3.24 64.96 12 7.01 Yes 54 -4.77 No 0 0 No -20 0.76 Yes 48 91.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68601777 + NM_133509 RAD51B 0 . . . 1.78 0 25 4.97 No 16 0.97 Yes 0 0 No -30 0.7 Yes 42 56.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68640410 + NM_133509 RAD51B 0 . . . 4.34 73.95 20 5.07 No 11 1.21 Yes 0 0 No -19 0.58 No 47 71.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68668344 + NM_133509 RAD51B 0 . . . 4.99 73.13 12 4.24 No 22 0.73 No 0 0 No -24 0.73 Yes 36 75.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21978811 - NM_000077 CDKN2A 0 . . . 0.82 0 17 4.58 No 61 -4.56 No 0 0 No -16 0.73 Yes 48 25.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94194058 - NM_005591 MRE11 0 . . . 0.35 73.26 30 5.38 No 3 0.76 No 0 0 No -29 0.7 Yes 36 78.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69010245 + NM_133509 RAD51B 0 . . . 4.43 71.86 12 4.24 No 5 0.33 No 0 0 No -24 0.79 Yes 46 69.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190715567 + NM_000534 PMS1 0 . . . 2.79 0 20 4.9 No 75 -4.2 No 0 0 No -19 0.56 No 55 35.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29112127 - NM_001005735 CHEK2 0 . . . 1.22 73.53 57 6.81 Yes 76 0.18 No 0 0 No -36 0.67 Yes 54 86.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68497716 + NM_133509 RAD51B 0 . . . 2.39 69.39 17 6.87 Yes 63 -4.34 No 0 0 No -27 0.79 Yes 49 59.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52442429 - NM_004656 BAP1 0 . . . 0.63 72.93 27 5.69 Yes 69 0.99 Yes 0 0 No -29 0.74 Yes 44 51.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47792931 + NM_000251 MSH2 0 . . . 0.52 73.59 18 4.9 No 39 0.69 No 0 0 No -26 0.69 Yes 49 77.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68847215 + NM_133509 RAD51B 0 . . . 2.42 0 19 5.67 Yes 35 0.29 No 0 0 No -49 0.42 No 23 62.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47752732 + NM_000251 MSH2 0 . . . 3.62 86.92 28 5.18 No 67 -1.13 No 0 0 No -27 0.83 Yes 52 75.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68329218 + NM_133509 RAD51B 0 . . . 6.94 79.82 17 3.31 No 11 0.73 No 0 0 No -33 0.74 Yes 47 57.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37082824 + NM_000249 MLH1 0 . . . 1.73 0 25 4.42 No 54 0.69 No 0 0 No -24 0.57 No 35 66.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152365683 - NM_005431 XRCC2 0 . . . 2.24 62.24 28 3.84 No -3 0.82 Yes 0 0 No -24 0.67 Yes 43 47.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23645633 - NM_024675 PALB2 0 . . . 1.51 68.64 19 4.15 No 10 0.32 No 0 0 No -23 0.8 Yes 48 82.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68703578 + NM_133509 RAD51B 0 . . . 8.23 77.61 32 5.33 No 9 1.2 Yes 0 0 No -34 0.64 No 49 65.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75496631 - NM_001040108 MLH3 0 . . . 0.16 74.88 20 4.58 No 66 1.46 Yes 0 0 No -19 0.81 Yes 54 58.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108142691 + NM_000051 ATM 0 . . . 2.88 65.49 44 6.55 Yes 56 1.45 Yes 0 0 No -21 0.55 No 52 48.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32938030 + NM_000059 BRCA2 0 . . . 5.02 59.78 20 4.98 No 66 0.71 No 0 0 No -19 0.85 Yes 42 88.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37087706 + NM_000249 MLH1 0 . . . 0.78 0 28 5.35 No 29 1.43 Yes 0 0 No -48 0.39 No 29 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68989004 + NM_133509 RAD51B 0 . . . 3.96 81.77 21 7.21 Yes 49 1.43 Yes 0 0 No -20 0.88 Yes 47 56.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68565157 + NM_133509 RAD51B 0 . . . 0.24 71.33 24 4.29 No 13 0.64 No 0 0 No -24 0.7 Yes 45 91.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68556156 + NM_133509 RAD51B 0 . . . 4.23 70.24 27 4.21 No 6 -2.26 No 0 0 No -26 0.5 No 24 50.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68819593 + NM_004360 CDH1 0 . . . 4.93 86.31 18 5.48 No 57 0.66 No 0 0 No -20 0.45 No 45 87.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68876970 + NM_133509 RAD51B 0 . . . 1.02 77.98 16 3.99 No 22 1.18 Yes 0 0 No -20 0.37 No 36 57.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190741428 + NM_000534 PMS1 0 . . . 5.33 89.34 33 5.91 Yes 8 0.93 Yes 0 0 No -32 0.76 Yes 50 95.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131969635 + NM_005732 RAD50 0 . . . 3.72 72.04 20 5.57 Yes 30 0.8 Yes 0 0 No -19 0.61 No 28 64.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68750133 + NM_133509 RAD51B 0 . . . 3.67 72.02 68 8.96 Yes -4 -0.22 No 0 0 No -23 0.67 Yes 39 74.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68975727 + NM_133509 RAD51B 0 . . . 0.36 0 17 7.06 Yes 23 1.01 Yes 0 0 No -16 0.76 Yes 32 60.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108219081 + NM_000051 ATM 0 . . . 2.81 68.85 27 6.04 Yes 18 0.7 No 0 0 No -22 0.72 Yes 40 63.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105204579 + NM_021930 RINT1 0 . . . 3.96 84 19 4.69 No 55 0.74 No 0 0 No -19 0.67 Yes 46 79.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84395949 - NM_139076 FAM175A 0 . . . 8.28 89.09 27 5.2 No 37 0.57 No 0 0 No -26 0.51 No 36 87.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32920305 + NM_000059 BRCA2 0 . . . 8.83 85.25 28 5.39 No 10 1.34 Yes 0 0 No -27 0.87 Yes 35 78.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1212182 + NM_000455 STK11 0 . . . 1.69 62.08 22 4.97 No 10 -1.27 No 0 0 No -22 0.8 Yes 30 55.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190720394 + NM_000534 PMS1 0 . . . 2.2 71.86 24 7.42 Yes 8 0.39 No 0 0 No -23 0.89 Yes 50 59.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68929197 + NM_133509 RAD51B 0 . . . 3.56 76.09 18 5.56 Yes 57 0.27 No 0 0 No -26 0.38 No 53 60.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68831455 + NM_133509 RAD51B 0 . . . 9.65 94.28 26 5.66 Yes 68 0.57 No 0 0 No -22 0.61 No 37 81.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215590523 - NM_000465 BARD1 0 . . . 1.14 66.22 18 5.91 Yes 34 0.37 No 0 0 No -17 0.46 No 24 71.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47758967 + NM_000251 MSH2 0 . . . 0.16 0 9 5.48 No 21 0.22 No 0 0 No -26 0.5 No 51 48.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131956045 + NM_005732 RAD50 0 . . . 1.37 0 32 5.68 Yes 43 1.23 Yes 0 0 No -27 0.56 No 37 92.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47706561 + NM_000251 MSH2 0 . . . 0.71 70.57 27 5.5 No 70 -5.7 No 0 0 No -26 0.75 Yes 52 78.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47682438 + NM_000251 MSH2 0 . . . 3 0 12 5.46 No 43 -3.04 No 0 0 No -17 0.32 No 54 43.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47631222 + NM_000251 MSH2 0 . . . 5.22 70.45 38 5.9 Yes 28 0.77 Yes 0 0 No -27 0.84 Yes 44 68.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105178254 + NM_021930 RINT1 0 . . . 4.11 77.74 25 4.26 No 58 -3.87 No 0 0 No -25 0.64 No 48 72.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68749500 + NM_133509 RAD51B 0 . . . 0.52 0 12 4.24 No 59 0.4 No 0 0 No -30 0.89 Yes 40 56.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104176912 - NM_001100119 XRCC3 0 . . . 1.88 74.46 21 5.18 No 6 1.11 Yes 0 0 No -24 0.54 No 52 53.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6045983 - NM_000535 PMS2 0 . . . 6 80.64 19 4.69 No 72 0.41 No 0 0 No -18 0.59 No 49 71.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75513652 - NM_001040108 MLH3 0 . . . 5.29 77.34 23 7.37 Yes 16 0.26 No 0 0 No -22 0.86 Yes 39 54.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69063805 + NM_133509 RAD51B 0 . . . 0.78 78.6 23 5.38 No 18 -1.69 No 0 0 No -22 0.53 No 48 50.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68335350 + NM_133509 RAD51B 0 . . . 3.57 74.54 15 5.39 No 31 0.06 No 0 0 No -56 0.75 Yes 49 39.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94223725 - NM_005591 MRE11 0 . . . 0.7 62.28 34 7.54 Yes 59 -1.53 No 0 0 No -33 0.68 Yes 49 29.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56812191 + NM_058216 RAD51C 0 . . . 6.24 82.31 17 5.41 No 58 1.2 Yes 0 0 No -25 0.48 No 44 63.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68862788 + NM_133509 RAD51B 0 . . . 5.96 81.26 13 5.71 Yes 61 -4.62 No 0 0 No -13 0.27 No 45 47.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40988311 + NM_001164269 RAD51 0 . . . 6.42 85.91 20 6.14 Yes 58 1.14 Yes 0 0 No -19 0.77 Yes 43 66.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68664912 + NM_133509 RAD51B 0 . . . 4.9 82.87 15 4.31 No 72 0.74 No 0 0 No -27 0.59 No 22 85.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68747308 + NM_133509 RAD51B 0 . . . 0.01 69.11 16 4.48 No 63 1.24 Yes 0 0 No -21 0.83 Yes 58 33.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29093381 - NM_001005735 CHEK2 0 . . . 5.44 79.11 25 5.57 Yes 53 0.07 No 0 0 No -29 0.76 Yes 50 94.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68789768 + NM_004360 CDH1 0 . . . 3.17 66.46 32 4.93 No 16 0.56 No 0 0 No -31 0.54 No 42 89.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68685144 + NM_133509 RAD51B 0 . . . 4.19 81.84 16 3.87 No 64 -2.47 No 0 0 No -20 0.61 No 52 58.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59934276 - NM_032043 BRIP1 0 . . . 0.66 67.52 39 6.46 Yes 36 0.71 No 0 0 No -38 0.85 Yes 26 49.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68671165 + NM_133509 RAD51B 0 . . . 0.84 79.97 27 5.16 No 67 0.06 No 0 0 No -47 0.63 No 49 31.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48033558 + NM_000179 MSH6 0 . . . 3.08 78.58 48 5.98 Yes 9 -0.25 No 25 0.66 Yes -33 0.6 No 49 81.18 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 69060814 + NM_133509 RAD51B 0 . . . 2.19 72.91 13 4.36 No 61 -3.97 No 0 0 No -12 0.45 No 51 31.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190724246 + NM_000534 PMS1 0 . . . 6.64 71.46 25 5.18 No 74 0.39 No 0 0 No -24 0.84 Yes 49 63.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68766884 + NM_133509 RAD51B 0 . . . 0.66 0 26 5.2 No 68 -4.21 No 0 0 No -25 0.96 Yes 55 51.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69116586 + NM_133509 RAD51B 0 . . . 2.3 0 20 5 No 7 0.69 No 0 0 No -20 0.36 No 51 81.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47665025 + NM_000251 MSH2 0 . . . 2.72 81.39 21 5.04 No 35 0.93 Yes 0 0 No -45 0.42 No 23 88.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68818997 + NM_004360 CDH1 0 . . . 8.23 80.14 15 4.43 No 29 0.39 No 0 0 No -27 0.81 Yes 38 53.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59938287 - NM_032043 BRIP1 0 . . . 1.56 59.82 17 5.21 No 61 1.12 Yes 0 0 No -25 0.82 Yes 43 44.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68756758 + NM_133509 RAD51B 0 . . . 6.16 79.84 15 4.58 No 13 2.06 Yes 0 0 No -19 0.66 Yes 45 55.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59927360 - NM_032043 BRIP1 0 . . . 5.35 80.27 21 6.64 Yes 74 -5.3 No 0 0 No -20 0.84 Yes 52 43.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90986521 - NM_002485 NBN 0 . . . 2.15 66.12 23 4.65 No 41 0.67 No 0 0 No -22 0.84 Yes 41 96.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6022472 - NM_000535 PMS2 0 . . . 1.11 78.04 27 5.48 No 72 0.45 No 0 0 No -26 0.72 Yes 50 33.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75484433 - NM_001040108 MLH3 0 . . . 2.39 79.62 24 4.8 No 36 1.16 Yes 0 0 No -32 0.48 No 45 86.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89644538 + NM_000314 PTEN 0 . . . 0.92 73.38 20 7.14 Yes 3 0.58 No 0 0 No -19 0.68 Yes 47 75.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68818304 + NM_004360 CDH1 0 . . . 1.81 69.19 11 4.52 No -4 0.77 Yes 0 0 No -17 0.53 No 48 71.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59841112 - NM_032043 BRIP1 0 . . . 2.25 66.08 18 5.24 No 38 0.96 Yes 0 0 No -25 0.82 Yes 28 61.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47780506 + NM_000251 MSH2 0 . . . 1.79 76.27 27 5.1 No 69 -5.13 No 0 0 No -24 0.44 No 54 37.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69036232 + NM_133509 RAD51B 0 . . . 4.03 78.49 21 5.8 Yes 75 0.78 Yes 0 0 No -20 0.58 No 39 85.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131933978 + NM_005732 RAD50 0 . . . 5.89 86 19 5.92 Yes 61 1.25 Yes 0 0 No -18 0.53 No 45 55.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68694166 + NM_133509 RAD51B 0 . . . 0.96 66.91 19 5.48 No 57 0.32 No 0 0 No -18 0.43 No 48 69.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68356495 + NM_133509 RAD51B 0 . . . 6.97 86.36 19 5.48 No -1 0.68 No 0 0 No -18 0.71 Yes 44 47.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131913608 + NM_005732 RAD50 0 . . . 4.4 66.46 20 4.65 No 16 0.95 Yes 0 0 No -19 0.63 No 42 89.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47690020 + NM_000251 MSH2 0 . . . 7.22 73.28 37 7.34 Yes 66 1.47 Yes 0 0 No -36 0.77 Yes 40 64.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68953519 + NM_133509 RAD51B 0 . . . 0.48 67.5 48 7.36 Yes 35 1.57 Yes 0 0 No -37 0.73 Yes 23 56.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68765806 + NM_133509 RAD51B 0 . . . 1.93 0 32 6.08 Yes 54 1.3 Yes 0 0 No -31 0.79 Yes 38 54.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29107021 - NM_001005735 CHEK2 0 . . . 10.39 85.07 12 4.69 No 68 1.23 Yes 0 0 No -21 0.37 No 45 88.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68832549 + NM_133509 RAD51B 0 . . . 5.18 82.76 13 4.38 No 67 1.76 Yes 0 0 No -27 0.48 No 40 85.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48034956 + NM_000179 MSH6 0 . . . 4.06 63.39 9 4.8 No 26 -2.46 No 0 0 No -8 0.33 No 41 63.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89673233 + NM_000314 PTEN 0 . . . 3.48 69.54 21 4.69 No 17 0.8 Yes 0 0 No -20 0.93 Yes 41 63.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152353666 - NM_005431 XRCC2 0 . . . 0.36 56.83 22 4.44 No 68 -6.5 No 0 0 No -44 0.7 Yes 41 47.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108169520 + NM_000051 ATM 0 . . . 0.19 63.17 26 5.18 No 38 0.33 No 0 0 No -25 0.95 Yes 35 75.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68437853 + NM_133509 RAD51B 0 . . . 2.57 76.27 58 8.19 Yes 6 0.77 No 0 0 No -57 0.58 No 39 60.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89653219 + NM_000314 PTEN 0 . . . 2.26 0 29 5.92 Yes 57 0.29 No 0 0 No -28 0.73 Yes 48 55.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108158684 + NM_000051 ATM 0 . . . 3.65 75.27 23 6.19 Yes 0 1.86 Yes 0 0 No -26 0.58 No 50 68.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52441719 - NM_004656 BAP1 0 . . . 3.83 89.78 16 7.07 Yes 73 -4.05 No 0 0 No -37 0.42 No 48 50.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41232681 - NM_007294 BRCA1 0 . . . 0.01 68.4 26 5.65 Yes 74 0.99 Yes 0 0 No -25 0.88 Yes 48 76.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7567794 - NM_000546 TP53 0 . . . 2.28 0 16 3.16 No 26 0.25 No 0 0 No -25 0.75 Yes 46 62.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190681018 + NM_000534 PMS1 0 . . . 0.39 66.23 25 5.29 No 26 -3.14 No 0 0 No -24 0.73 Yes 29 64.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1212123 + NM_000455 STK11 0 . . . 2.18 76.94 35 6.39 Yes 73 -5.33 No 0 0 No -28 0.77 Yes 48 48.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152358876 - NM_005431 XRCC2 0 . . . 5.57 75.17 14 4.89 No 74 -3.7 No 0 0 No -13 0.35 No 46 64.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68696319 + NM_133509 RAD51B 0 . . . 3.76 83.44 19 5.39 No 0 0.87 Yes 0 0 No -48 0.88 Yes 42 88.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89632262 + NM_000314 PTEN 0 . . . 1.1 66.91 20 4.09 No -4 0.35 No 0 0 No -20 0.34 No 50 66.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48032191 + NM_000179 MSH6 0 . . . 6.14 75.32 40 6.69 Yes 20 0.55 No 0 0 No -19 0.45 No 43 79.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68594028 + NM_133509 RAD51B 0 . . . 7.55 79.25 16 4.69 No 7 1.21 Yes 0 0 No -46 0.63 No 39 80.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215650721 - NM_000465 BARD1 0 . . . 0.62 65.78 16 4 No 54 0.46 No 0 0 No -37 0.64 No 41 80.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32906714 + NM_000059 BRCA2 0 . . . 1.13 69.82 21 6.23 Yes 29 0.67 No 0 0 No -19 0.33 No 46 25.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89688104 + NM_000314 PTEN 0 . . . 1.63 82.86 70 5.77 Yes 18 1.19 Yes 0 0 No -29 0.62 No 40 50.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59786135 - NM_032043 BRIP1 0 . . . 5.09 70.27 21 5.36 No 46 1.74 Yes 0 0 No -23 0.44 No 46 65.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68530928 + NM_133509 RAD51B 0 . . . 0.58 0 27 4.99 No 41 1.03 Yes 0 0 No -27 0.52 No 44 55.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47668977 + NM_000251 MSH2 0 . . . 2.78 83.85 20 6.46 Yes 33 1.15 Yes 0 0 No -22 0.57 No 50 52.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59824960 - NM_032043 BRIP1 0 . . . 2.48 0 11 5.56 Yes 6 1.43 Yes 0 0 No -21 0.54 No 52 73.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190733870 + NM_000534 PMS1 0 . . . 0.3 67.36 22 5.2 No 68 -5.82 No 0 0 No -26 0.47 No 50 34.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68770178 + NM_004360 CDH1 0 . . . 2.56 76.73 22 5.29 No 3 0.09 No 0 0 No -21 0.89 Yes 49 64.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6016585 - NM_000535 PMS2 0 . . . 1.36 81.25 16 5.33 No -3 0.67 No 0 0 No -28 0.35 No 49 90.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215615607 - NM_000465 BARD1 0 . . . 0.43 70.67 22 6.15 Yes 57 -2.79 No 0 0 No -21 0.54 No 44 38.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69009987 + NM_133509 RAD51B 0 . . . 4.78 66.94 18 5.36 No 64 0.33 No 0 0 No -32 0.48 No 48 86.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68675844 + NM_133509 RAD51B 0 . . . 0.1 69.86 31 5.91 Yes 35 0.12 No 0 0 No -33 0.47 No 39 64.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41016750 + NM_001164269 RAD51 0 . . . 6.53 75.45 19 4.46 No 4 1.53 Yes 0 0 No -31 0.72 Yes 12 93.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33440986 - NM_002878 RAD51D 0 . . . 8.12 88.22 19 4.8 No 73 0.9 Yes 0 0 No -45 0.41 No 47 58.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47769784 + NM_000251 MSH2 0 . . . 2.64 66 28 5.66 Yes 14 -1.76 No 0 0 No -27 0.88 Yes 29 42.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41003611 + NM_001164269 RAD51 0 . . . 5.11 70.38 18 4.9 No 29 0.32 No 0 0 No -46 0.75 Yes 48 80.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68772841 + NM_133509 RAD51B 0 . . . 1.78 65.29 18 4.89 No -2 0.81 Yes 0 0 No -23 0.61 No 60 65.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68363983 + NM_133509 RAD51B 0 . . . 1.33 56.53 27 5.65 Yes 64 0.49 No 0 0 No -15 0.46 No 61 33.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69138641 + NM_133509 RAD51B 0 . . . 4.08 75.54 23 4.11 No 70 -4.62 No 0 0 No -29 0.66 No 47 50.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131894861 + NM_005732 RAD50 0 . . . 2.98 83.22 20 4.67 No 28 0.88 Yes 0 0 No -19 0.49 No 30 77.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48014400 + NM_000179 MSH6 0 . . . 1.8 74.01 16 3.6 No 59 -4.02 No 0 0 No -29 0.83 Yes 46 44.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108212884 + NM_000051 ATM 0 . . . 3.87 68.38 35 5.19 No 75 0.33 No 0 0 No -27 0.88 Yes 46 69.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68470119 + NM_133509 RAD51B 0 . . . 0.45 0 20 3.6 No 2 0.94 Yes 0 0 No -23 0.8 Yes 56 32.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108193436 + NM_000051 ATM 0 . . . 5.37 70.09 15 5.39 No 64 0.83 Yes 0 0 No -19 0.51 No 49 52.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69058945 + NM_133509 RAD51B 0 . . . 0.33 68.18 23 4.8 No 66 1.23 Yes 0 0 No -22 0.96 Yes 48 46.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68772687 + NM_133509 RAD51B 0 . . . 8.59 88.84 21 5.2 No 63 1.04 Yes 0 0 No -43 0.5 No 38 41.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68488278 + NM_133509 RAD51B 0 . . . 0.73 64.17 17 5.81 Yes 44 0.28 No 0 0 No -32 0.85 Yes 23 75.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68370875 + NM_133509 RAD51B 0 . . . 4.46 71.91 59 8.96 Yes -4 0.85 Yes 0 0 No -31 0.76 Yes 42 51.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89661098 + NM_000314 PTEN 0 . . . 1.53 0 31 5.74 Yes 43 0.49 No 0 0 No -35 0.5 No 15 49.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84388571 - NM_139076 FAM175A 0 . . . 3.83 72.74 16 5.74 Yes 43 -3.86 No 0 0 No -32 0.3 No 42 80.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89629652 + NM_000314 PTEN 0 . . . 5.49 77.61 46 7.31 Yes 9 0.56 No 0 0 No -33 0.9 Yes 49 58.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59818263 - NM_032043 BRIP1 0 . . . 5.34 78.56 24 4.9 No 7 0.07 No 0 0 No -23 0.56 No 51 86.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215628094 - NM_000465 BARD1 0 . . . 4.65 86.62 18 4.52 No 54 1.43 Yes 0 0 No -30 0.5 No 42 90.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59897728 - NM_032043 BRIP1 0 . . . 3.04 62.99 32 6 Yes 72 0.28 No 0 0 No -31 0.73 Yes 40 47.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59899648 - NM_032043 BRIP1 0 . . . 1.95 75.87 17 7.02 Yes 4 0.66 No 0 0 No -31 0.39 No 45 41.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190671384 + NM_000534 PMS1 0 . . . 7.24 84.9 15 5.74 Yes 21 0.5 No 0 0 No -26 0.75 Yes 49 70.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190680414 + NM_000534 PMS1 0 . . . 0.92 82.47 21 4.79 No 3 0.76 No 0 0 No -20 0.85 Yes 44 88.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94157869 - NM_005591 MRE11 0 . . . 5.44 79.91 16 5.72 Yes 33 0.84 Yes 0 0 No -24 0.38 No 38 94.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47655155 + NM_000251 MSH2 0 . . . 0.42 71.82 23 4.94 No 52 0.49 No 0 0 No -44 0.48 No 42 60.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108187074 + NM_000051 ATM 0 . . . 0.64 67.45 23 4.3 No -3 0.89 Yes 0 0 No -23 0.66 Yes 61 51.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32974378 + NM_000059 BRCA2 0 . . . 1.65 62.92 70 8.35 Yes 27 0.01 No 0 0 No -52 0.37 No 36 32.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48021431 + NM_000179 MSH6 0 . . . 4.42 83 43 7.88 Yes 23 0.37 No 0 0 No -31 0.35 No 47 93.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47645582 + NM_000251 MSH2 0 . . . 0.71 66.64 32 5.57 Yes 60 0.42 No 0 0 No -17 0.65 No 47 77.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41233413 - NM_007294 BRCA1 0 . . . 6.4 81.2 20 5.1 No 28 0.34 No 0 0 No -22 0.72 Yes 43 91.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29101847 - NM_001005735 CHEK2 0 . . . 3.17 66.46 21 5.02 No 16 1.01 Yes 0 0 No -20 0.63 No 42 93.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32888172 + NM_000059 BRCA2 0 . . . 4.92 80.76 30 4.55 No 66 -4.77 No 0 0 No -21 0.55 No 49 53.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47682419 + NM_000251 MSH2 0 . . . 1.28 55.22 28 5.38 No 68 0 No 0 0 No -27 0.84 Yes 46 49.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90943810 - NM_002485 NBN 0 . . . 2.7 68.41 36 8.1 Yes 3 0.82 Yes 0 0 No -35 0.83 Yes 43 71.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41213936 - NM_007294 BRCA1 0 . . . 1.81 79.6 17 6.93 Yes 76 -5.34 No 0 0 No -27 0.45 No 51 67.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190682523 + NM_000534 PMS1 0 . . . 3.22 83.01 22 5.75 Yes 35 0.68 No 0 0 No -21 0.39 No 48 53.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6014151 - NM_000535 PMS2 0 . . . 2.32 0 24 5.27 No 55 0.78 Yes 0 0 No -23 0.55 No 53 31.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69071651 + NM_133509 RAD51B 0 . . . 0.13 0 16 4.54 No 71 0.68 No 0 0 No -18 0.77 Yes 47 77.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108136470 + NM_000051 ATM 0 . . . 1.57 72.13 38 6.41 Yes -1 0.05 No 0 0 No -25 0.45 No 59 27.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68847300 + NM_004360 CDH1 0 . . . 3.01 71.97 16 5.54 No 6 0.54 No 0 0 No -24 0.62 No 42 50.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68339196 + NM_133509 RAD51B 0 . . . 3.53 67.5 33 4.36 No -4 0.8 Yes 0 0 No -32 0.86 Yes 49 21.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7579387 - NM_000546 TP53 0 . . . 10.75 85.68 23 3.72 No 7 0.49 No 0 0 No -22 0.75 Yes 51 84.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47680784 + NM_000251 MSH2 0 . . . 6.68 69.78 26 5.66 Yes 74 0.47 No 0 0 No -26 0.6 No 38 47.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68672085 + NM_133509 RAD51B 0 . . . 2.61 68.21 17 4.72 No 20 0.56 No 0 0 No -20 0.76 Yes 47 29.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68616637 + NM_133509 RAD51B 0 . . . 0.29 0 31 6.42 Yes 64 0.64 No 0 0 No -36 0.39 No 35 61.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891572 + NM_133509 RAD51B 0 . . . 3.89 75.74 57 7.25 Yes 69 1.27 Yes 0 0 No -40 0.58 No 44 72.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190720119 + NM_000534 PMS1 0 . . . 6.33 87.72 57 6.38 Yes 23 1.39 Yes 0 0 No -42 0.68 Yes 46 72.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32943376 + NM_000059 BRCA2 0 . . . 7.4 85.96 12 4.79 No 21 0.33 No 0 0 No -23 0.41 No 36 57.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68793629 + NM_004360 CDH1 0 . . . 7.06 86 25 7.22 Yes 59 0.17 No 0 0 No -24 0.78 Yes 54 45.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89698755 + NM_000314 PTEN 0 . . . 2.33 75.9 22 5.1 No 47 0.83 Yes 0 0 No -21 0.87 Yes 51 49.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68852736 + NM_004360 CDH1 0 . . . 0.58 0 31 6.63 Yes 70 -4.64 No 0 0 No -30 0.96 Yes 36 38.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105199959 + NM_021930 RINT1 0 . . . 3.15 76.63 18 5.59 Yes 67 -4.97 No 0 0 No -29 0.7 Yes 48 80.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33434699 - NM_002878 RAD51D 0 . . . 2.86 66.59 29 5.56 Yes 0 0.46 No 0 0 No -28 0.68 Yes 58 30.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89647495 + NM_000314 PTEN 0 . . . 3.65 80.79 17 5.08 No 48 0.02 No 0 0 No -16 0.3 No 46 33.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45794576 - NM_001048171 MUTYH 0 . . . 9.21 84.01 16 4.56 No 8 1.49 Yes 0 0 No -23 0.64 No 50 81.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108157617 + NM_000051 ATM 0 . . . 0.78 69.75 16 5.1 No 5 0.98 Yes 0 0 No -19 0.55 No 47 64.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108173882 + NM_000051 ATM 0 . . . 2.1 69.03 19 3.27 No 74 1.23 Yes 0 0 No -21 0.58 No 47 84.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56790751 + NM_058216 RAD51C 0 . . . 2.52 0 16 5.22 No 75 0.59 No 0 0 No -21 0.94 Yes 16 41.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69145618 + NM_133509 RAD51B 0 . . . 8.06 83.12 18 5.9 Yes 5 0.69 No 0 0 No -22 0.52 No 42 62.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68622848 + NM_133509 RAD51B 0 . . . 6.57 79.9 15 4.36 No 18 1.27 Yes 0 0 No -18 0.8 Yes 40 87.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40998871 + NM_001164269 RAD51 0 . . . 2.39 76.63 27 5.87 Yes 45 -3.5 No 0 0 No -26 0.64 No 43 55.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674684 + NM_000251 MSH2 0 . . . 4.23 75.9 13 5.29 No 74 1.08 Yes 0 0 No -27 0.32 No 53 59.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68540551 + NM_133509 RAD51B 0 . . . 7.26 87.05 20 3.62 No 61 0.46 No 0 0 No -26 0.45 No 40 48.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68792255 + NM_004360 CDH1 0 . . . 0.13 72.37 12 4.9 No 51 0.9 Yes 0 0 No -23 0.66 No 47 28.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40993953 + NM_001164269 RAD51 0 . . . 5.75 77.33 73 9.15 Yes 45 0.43 No 0 0 No -54 0.74 Yes 41 90.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59805899 - NM_032043 BRIP1 0 . . . 4.02 81.99 17 5.43 No 50 0.41 No 0 0 No -30 0.47 No 43 59.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68954407 + NM_133509 RAD51B 0 . . . 4.91 85.02 16 4.68 No 4 0.6 No 0 0 No -37 0.33 No 43 47.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48022924 + NM_000179 MSH6 0 . . . 4.29 72.34 33 6.24 Yes 74 1.42 Yes 0 0 No -32 0.71 Yes 45 54.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68769213 + NM_133509 RAD51B 0 . . . 2.98 74.5 17 6.56 Yes 72 -5.68 No 0 0 No -16 0.75 Yes 49 23.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69146224 + NM_133509 RAD51B 0 . . . 0.85 64.08 35 6.4 Yes 58 1.44 Yes 0 0 No -34 0.83 Yes 48 37.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41024890 + NM_001164269 RAD51 0 . . . 4.17 78.77 28 5.7 Yes 71 0.46 No 0 0 No -28 0.69 Yes 40 49.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41221033 - NM_007294 BRCA1 0 . . . 0.03 58.81 27 5.39 No 44 -3.12 No 0 0 No -53 0.72 Yes 49 58.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108200524 + NM_000051 ATM 0 . . . 3.76 71.71 27 5.52 No 27 1.43 Yes 0 0 No -26 0.83 Yes 31 56.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68843364 + NM_133509 RAD51B 0 . . . 5.13 80.65 35 5.5 No 18 0.61 No 0 0 No -34 0.54 No 40 64.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47638883 + NM_000251 MSH2 0 . . . 3.41 76.24 30 5.74 Yes 46 -1.77 No 0 0 No -29 0.92 Yes 50 89.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131955579 + NM_005732 RAD50 0 . . . 0.32 69.7 26 5.2 No 23 -2.86 No 0 0 No -25 0.63 No 48 53.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1226718 + NM_000455 STK11 0 . . . 1.93 72.48 15 5.48 No 61 -4.47 No 0 0 No -14 0.37 No 52 29.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59836856 - NM_032043 BRIP1 0 . . . 0.37 72.09 23 6.32 Yes 53 0.8 Yes 0 0 No -22 0.88 Yes 30 65.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89631494 + NM_000314 PTEN 0 . . . 5.94 84.8 50 7.68 Yes 65 1.3 Yes 0 0 No -28 0.46 No 43 57.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59850287 - NM_032043 BRIP1 0 . . . 5.03 79.78 29 5.54 No 29 0.72 No 0 0 No -28 0.81 Yes 29 89.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68972231 + NM_133509 RAD51B 0 . . . 2.95 72.95 17 5.57 Yes 7 0.71 No 0 0 No -25 0.22 No 47 82.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68389188 + NM_133509 RAD51B 0 . . . 3.41 75.47 37 7.39 Yes 16 1.25 Yes 0 0 No -31 0.78 Yes 42 96.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68761118 + NM_133509 RAD51B 0 . . . 2.08 57.85 34 7.47 Yes 30 0.19 No 0 0 No -23 0.6 No 43 36.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68684574 + NM_133509 RAD51B 0 . . . 2.92 76.02 35 5.83 Yes 70 0.7 No 0 0 No -23 0.59 No 43 73.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47668354 + NM_000251 MSH2 0 . . . 5.43 75.77 22 6.45 Yes 37 0.19 No 0 0 No -21 0.56 No 50 38.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90998204 - NM_002485 NBN 0 . . . 0.45 58.22 36 5.82 Yes 17 0.64 No 0 0 No -25 0.49 No 45 60.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68573433 + NM_133509 RAD51B 0 . . . 0.79 66.39 24 6.17 Yes 44 0.19 No 0 0 No -23 0.78 Yes 46 58.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68342304 + NM_133509 RAD51B 0 . . . 2.9 77.36 14 4.47 No 1 0.51 No 0 0 No -23 0.54 No 51 68.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131908212 + NM_005732 RAD50 0 . . . 1.52 71.12 29 5.84 Yes 57 0.85 Yes 0 0 No -28 0.73 Yes 51 33.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59920560 - NM_032043 BRIP1 0 . . . 6.51 78.59 16 5.83 Yes 34 0 No 0 0 No -33 0.53 No 35 58.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7564491 - NM_000546 TP53 0 . . . 0.1 74.68 32 7.66 Yes 64 1.1 Yes 0 0 No -26 0.56 No 52 62.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94201289 - NM_005591 MRE11 0 . . . 1.73 82.08 23 5.2 No 12 0.71 No 0 0 No -20 0.35 No 46 83.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94182679 - NM_005591 MRE11 0 . . . 0.68 75.15 18 5.22 No 59 -3.39 No 0 0 No -33 0.24 No 49 74.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68326373 + NM_133509 RAD51B 0 . . . 0.54 61.02 17 5.02 No 35 0.92 Yes 0 0 No -25 0.42 No 52 37.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59918887 - NM_032043 BRIP1 0 . . . 6.34 79.13 26 7.29 Yes 20 2.21 Yes 0 0 No -25 0.79 Yes 38 96.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108186825 + NM_000051 ATM 0 . . . 2.95 72.86 37 5.01 No 23 0.15 No 0 0 No -23 0.66 Yes 48 40.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68284657 + NM_133509 RAD51B 0 . . . 1.75 79.39 24 5.47 No 33 1.08 Yes 0 0 No -23 0.53 No 25 80.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68340948 + NM_133509 RAD51B 0 . . . 7.64 76.92 19 5 No 14 1.9 Yes 0 0 No -18 0.77 Yes 44 95.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29106448 - NM_001005735 CHEK2 0 . . . 0.67 48.91 22 4.83 No 24 1.05 Yes 0 0 No -22 0.72 Yes 34 62.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41205301 - NM_007294 BRCA1 0 . . . 5.35 83.29 37 5.8 Yes 11 1.59 Yes 0 0 No -32 0.36 No 47 79.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105171747 + NM_021930 RINT1 0 . . . 5.2 85.02 23 5.31 No 5 1.23 Yes 0 0 No -23 0.54 No 53 81.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68796096 + NM_004360 CDH1 0 . . . 0.68 67.49 18 5.47 No 14 2.18 Yes 0 0 No -23 0.44 No 44 84.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59914727 - NM_032043 BRIP1 0 . . . 3.04 62.87 29 4.55 No 26 1.69 Yes 0 0 No -28 0.85 Yes 40 67.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68451104 + NM_133509 RAD51B 0 . . . 3.3 78.54 20 5.83 Yes 64 0.86 Yes 0 0 No -19 0.44 No 43 95.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32910544 + NM_000059 BRCA2 0 . . . 0.77 0 19 4.8 No 63 1.02 Yes 0 0 No -24 0.61 No 50 86.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68818701 + NM_004360 CDH1 0 . . . 1.54 76.07 17 5.57 Yes -4 1.49 Yes 0 0 No -16 0.77 Yes 49 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131966734 + NM_005732 RAD50 0 . . . 6.25 74.9 45 7.83 Yes 11 0.77 No 0 0 No -26 0.61 No 43 61.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69032944 + NM_133509 RAD51B 0 . . . 10.44 85.68 33 5.72 Yes 68 0.94 Yes 0 0 No -33 0.24 No 54 39.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131936793 + NM_005732 RAD50 0 . . . 2.04 68.35 51 7.77 Yes 19 0.96 Yes 0 0 No -36 0.88 Yes 39 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29096909 - NM_001005735 CHEK2 0 . . . 0.59 74.68 11 3.87 No 64 0.84 Yes 0 0 No -10 0.4 No 47 54.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90979327 - NM_002485 NBN 0 . . . 1.95 74.57 20 6.08 Yes 76 -4.52 No 0 0 No -30 0.38 No 50 23.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59762779 - NM_032043 BRIP1 0 . . . 5.16 80.76 21 4.89 No 0 1.08 Yes 0 0 No -50 0.82 Yes 42 78.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68676107 + NM_133509 RAD51B 0 . . . 4.86 85.88 41 6.4 Yes 4 1.53 Yes 0 0 No -40 0.24 No 47 63.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47629031 + NM_000251 MSH2 0 . . . 0.74 78.23 26 5.66 Yes 27 0.65 No 0 0 No -41 0.24 No 31 75.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68610336 + NM_133509 RAD51B 0 . . . 3.33 70.23 10 4.69 No 22 0.34 No 0 0 No -24 0.43 No 30 75.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56773032 + NM_058216 RAD51C 0 . . . 2.41 67.41 30 6.38 Yes 52 0.27 No 0 0 No -29 0.91 Yes 41 77.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215604642 - NM_000465 BARD1 0 . . . 5.73 79.95 12 5.08 No 5 0.49 No 0 0 No -29 0.25 No 42 56.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94168609 - NM_005591 MRE11 0 . . . 0.53 0 32 6.48 Yes 45 1.13 Yes 0 0 No -31 0.77 Yes 13 58.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68854122 + NM_133509 RAD51B 0 . . . 1.63 73.87 24 4.63 No 33 0.12 No 0 0 No -31 0.56 No 48 22.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56770278 + NM_058216 RAD51C 0 . . . 6.63 81.2 29 6.58 Yes 63 1.29 Yes 0 0 No -28 0.85 Yes 39 68.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90960682 - NM_002485 NBN 0 . . . 7.19 92.68 30 4.97 No 19 0.59 No 0 0 No -23 0.54 No 45 58.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68558669 + NM_133509 RAD51B 0 . . . 4.08 76.81 28 4.75 No 74 0.35 No 0 0 No -27 0.44 No 51 68.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190703525 + NM_000534 PMS1 0 . . . 3.59 72.46 16 4.69 No 40 -4.1 No 0 0 No -44 0.84 Yes 46 73.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59890891 - NM_032043 BRIP1 0 . . . 6.1 81 20 5.1 No 53 1.08 Yes 0 0 No -19 0.3 No 47 58.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68782929 + NM_133509 RAD51B 0 . . . 0.87 65 25 4.79 No 33 0.5 No 0 0 No -24 0.75 Yes 45 53.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215595853 - NM_000465 BARD1 0 . . . 7.36 78.36 30 5.74 Yes 25 0.1 No 0 0 No -26 0.46 No 41 66.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94226983 - NM_005591 MRE11 0 . . . 6.22 72.63 36 6.08 Yes 72 -3.47 No 0 0 No -24 0.55 No 44 59.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68584666 + NM_133509 RAD51B 0 . . . 0.19 67.2 23 7.27 Yes -4 0.59 No 0 0 No -22 0.85 Yes 56 57.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68574290 + NM_133509 RAD51B 0 . . . 3.39 79.22 26 6.93 Yes 12 0.95 Yes 0 0 No -25 0.86 Yes 46 93.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68440167 + NM_133509 RAD51B 0 . . . 0.82 64.21 34 5.93 Yes 46 0.82 Yes 0 0 No -33 0.56 No 40 51.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68574861 + NM_133509 RAD51B 0 . . . 8.98 87.17 48 6.06 Yes 13 0.05 No 0 0 No -47 0.58 No 44 45.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37071628 + NM_000249 MLH1 0 . . . 1.25 79.03 18 4.62 No 64 1.79 Yes 0 0 No -44 0.93 Yes 48 49.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94160544 - NM_005591 MRE11 0 . . . 3.13 84.11 15 4.94 No 10 -1.19 No 0 0 No -57 0.87 Yes 45 76.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6038792 - NM_000535 PMS2 0 . . . 4.77 79.32 12 5.29 No 61 -5.36 No 0 0 No -23 0.5 No 50 38.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94222185 - NM_005591 MRE11 0 . . . 0.67 0 25 5 No 53 -1.32 No 0 0 No -24 0.85 Yes 32 42.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108219946 + NM_000051 ATM 0 . . . 0.36 0 26 4.71 No 23 -3.16 No 0 0 No -25 0.7 Yes 53 86.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108151393 + NM_000051 ATM 0 . . . 9.29 83.73 48 6.74 Yes 8 0.64 No 0 0 No -45 0.8 Yes 46 66.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68825262 + NM_004360 CDH1 0 . . . 3.52 68.74 17 4.46 No 29 1.9 Yes 0 0 No -23 0.55 No 42 90.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68658765 + NM_133509 RAD51B 0 . . . 2.24 80.01 27 5.29 No -3 1.73 Yes 0 0 No -26 0.92 Yes 44 64.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33445056 - NM_002878 RAD51D 0 . . . 5.8 87.05 45 7.48 Yes 25 1.2 Yes 0 0 No -39 0.71 Yes 33 82.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56784325 + NM_058216 RAD51C 0 . . . 2.59 72.15 16 4.69 No 72 0.54 No 0 0 No -30 0.25 No 49 69.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131968754 + NM_005732 RAD50 0 . . . 1.22 78.2 26 6.93 Yes 24 0.56 No 0 0 No -31 0.61 No 34 45.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68918247 + NM_133509 RAD51B 0 . . . 5.61 82.63 26 6 Yes 7 0.99 Yes 0 0 No -31 0.41 No 41 73.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59786007 - NM_032043 BRIP1 0 . . . 0.64 56.85 44 6.95 Yes 1 0.13 No 0 0 No -29 0.89 Yes 57 46.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215648129 - NM_000465 BARD1 0 . . . 5.9 73.92 18 3.73 No 21 0.21 No 0 0 No -17 0.59 No 46 78.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105200653 + NM_021930 RINT1 0 . . . 4.81 77.97 41 6.71 Yes 36 0.85 Yes 0 0 No -20 0.21 No 43 69.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59897275 - NM_032043 BRIP1 0 . . . 0.83 72.26 21 5.65 Yes 11 0.22 No 0 0 No -20 0.7 Yes 47 43.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45798769 - NM_001048171 MUTYH 0 . . . 2.17 71.34 34 7.98 Yes 52 -3.74 No 0 0 No -33 0.72 Yes 43 65.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68511156 + NM_133509 RAD51B 0 . . . 1.27 58.65 15 5 No 38 1.3 Yes 0 0 No -19 0.44 No 20 91.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32961486 + NM_000059 BRCA2 0 . . . 4.4 68.14 19 7.07 Yes -1 0.26 No 0 0 No -18 0.5 No 34 35.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68833402 + NM_004360 CDH1 0 . . . 1.79 0 24 4.27 No 1 1.45 Yes 0 0 No -21 0.45 No 57 45.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68480265 + NM_133509 RAD51B 0 . . . 4.39 70.52 29 4.5 No 71 0.89 Yes 0 0 No -57 0.43 No 45 92.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48029735 + NM_000179 MSH6 0 . . . 1.62 72.12 20 4.95 No 24 1.48 Yes 0 0 No -19 0.71 Yes 39 72.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94206159 - NM_005591 MRE11 0 . . . 5.07 74.33 15 4.43 No 59 1.98 Yes 0 0 No -27 0.45 No 52 76.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59903399 - NM_032043 BRIP1 0 . . . 7.39 86.48 18 4.54 No 47 1.59 Yes 0 0 No -28 0.5 No 41 90.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47786704 + NM_000251 MSH2 0 . . . 1.49 67.02 16 4.32 No 37 0.86 Yes 0 0 No -23 0.52 No 21 76.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105196724 + NM_021930 RINT1 0 . . . 4.51 81.12 28 4.65 No 33 1.18 Yes 0 0 No -42 0.35 No 14 37.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7591457 - NM_000546 TP53 0 . . . 8.1 92.25 35 5.82 Yes 71 0.25 No 0 0 No -29 0.77 Yes 45 83.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41224379 - NM_007294 BRCA1 0 . . . 5.41 90.92 26 5.21 No 3 0.8 Yes 0 0 No -25 0.77 Yes 43 76.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32929532 + NM_000059 BRCA2 0 . . . 1.83 70.2 52 6.53 Yes 23 1.48 Yes 0 0 No -30 0.5 No 35 76.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68837242 + NM_133509 RAD51B 0 . . . 2.54 71.79 14 5 No -4 0.19 No 0 0 No -18 0.49 No 40 27.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68355375 + NM_133509 RAD51B 0 . . . 1.83 71.85 25 3.49 No 66 0.27 No 0 0 No -20 0.42 No 41 58.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68601689 + NM_133509 RAD51B 0 . . . 4.32 76.42 25 4.88 No 65 0.88 Yes 0 0 No -25 0.45 No 42 68.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68991327 + NM_133509 RAD51B 0 . . . 0.19 0 9 5.2 No 57 -2.88 No 0 0 No -22 0.61 No 31 51.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68904884 + NM_133509 RAD51B 0 . . . 1.68 74.77 35 6.32 Yes 46 -3 No 0 0 No -34 0.54 No 49 67.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68465967 + NM_133509 RAD51B 0 . . . 5.16 83.15 63 6.93 Yes 62 1.43 Yes 0 0 No -48 0.52 No 54 69.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68790658 + NM_004360 CDH1 0 . . . 2.23 75.8 19 5 No 59 1.42 Yes 0 0 No -21 0.34 No 55 56.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131932059 + NM_005732 RAD50 0 . . . 4.26 74.61 31 4.37 No 57 0.85 Yes 0 0 No -26 0.94 Yes 38 97.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33442723 - NM_002878 RAD51D 0 . . . 5.2 85.02 16 5.04 No 59 1.89 Yes 0 0 No -20 0.57 No 53 80.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59841281 - NM_032043 BRIP1 0 . . . 3.19 71.4 20 6.34 Yes 63 -6.03 No 0 0 No -28 0.33 No 46 70.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37057041 + NM_000249 MLH1 0 . . . 7.24 84.9 18 4.68 No 22 1.4 Yes 0 0 No -55 0.62 No 45 74.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190687779 + NM_000534 PMS1 0 . . . 0.49 69.62 46 6.37 Yes 57 0.26 No 0 0 No -26 0.4 No 46 43.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68843289 + NM_004360 CDH1 0 . . . 6.9 77.08 27 6.08 Yes 8 1.1 Yes 0 0 No -30 0.88 Yes 50 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68668190 + NM_133509 RAD51B 0 . . . 3.82 66.31 27 5.38 No 23 0.77 Yes 0 0 No -26 0.87 Yes 35 93.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84402684 - NM_139076 FAM175A 0 . . . 3.82 75.89 44 8.25 Yes 50 -5.03 No 0 0 No -43 0.65 No 49 25.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68765121 + NM_133509 RAD51B 0 . . . 5.5 70.91 10 4 No 76 -2.5 No 0 0 No -26 0.72 Yes 45 61.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47724862 + NM_000251 MSH2 0 . . . 1.47 77.63 16 4.46 No 7 1.16 Yes 0 0 No -26 0.39 No 51 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94206109 - NM_005591 MRE11 0 . . . 11.57 93.36 43 7.04 Yes 56 1.55 Yes 0 0 No -26 0.89 Yes 44 86.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29121682 - NM_001005735 CHEK2 0 . . . 3.48 72.12 29 6.64 Yes 55 1.38 Yes 0 0 No -29 0.8 Yes 51 95.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108223541 + NM_000051 ATM 0 . . . 2.26 75.99 26 4.88 No 73 -5.42 No 0 0 No -30 0.36 No 52 35.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68860867 + NM_133509 RAD51B 0 . . . 1.16 74.44 25 6.46 Yes 63 0.76 No 0 0 No -23 0.31 No 41 84.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108163291 + NM_000051 ATM 0 . . . 5.75 82.47 15 4.58 No 4 0.79 Yes 0 0 No -18 0.64 No 38 57.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215592806 - NM_000465 BARD1 0 . . . 8.19 85.45 15 4.58 No 48 1.15 Yes 0 0 No -43 0.25 No 40 82.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48021081 + NM_000179 MSH6 0 . . . 0.63 78.99 22 4.69 No 34 1.02 Yes 0 0 No -21 0.97 Yes 49 52.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68630816 + NM_133509 RAD51B 0 . . . 7.24 85.05 30 6 Yes 76 0.31 No 0 0 No -29 0.73 Yes 42 86.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68648161 + NM_133509 RAD51B 0 . . . 3.15 81.23 21 5 No 8 0.25 No 0 0 No -23 0.66 Yes 50 79.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21990218 - NM_000077 CDKN2A 0 . . . 3.16 72.82 12 4.69 No 56 0.83 Yes 0 0 No -51 0.78 Yes 53 36.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68574106 + NM_133509 RAD51B 0 . . . 3.08 78.71 15 5.28 No 57 -5.22 No 0 0 No -45 0.21 No 40 32.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68459840 + NM_133509 RAD51B 0 . . . 3.78 79.03 9 4.69 No 55 0.8 Yes 0 0 No -20 0.84 Yes 47 91.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21991723 - NM_000077 CDKN2A 0 . . . 0.42 73.16 16 4.36 No 41 0.33 No 0 0 No -15 0.75 Yes 11 64.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108120998 + NM_000051 ATM 0 . . . 0.33 84.22 46 6.48 Yes 76 1.44 Yes 0 0 No -40 0.62 No 25 40.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108208640 + NM_000051 ATM 0 . . . 1.34 67.2 15 4.53 No 74 -5.85 No 0 0 No -37 0.93 Yes 43 38.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68376211 + NM_133509 RAD51B 0 . . . 4.28 71.96 16 4.68 No 11 1.27 Yes 0 0 No -39 0.54 No 47 48.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68567035 + NM_133509 RAD51B 0 . . . 3.72 74.68 59 8.37 Yes 50 -5.43 No 0 0 No -27 0.45 No 43 55.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29110961 - NM_001005735 CHEK2 0 . . . 6.57 86.26 30 6.23 Yes 44 0.05 No 0 0 No -25 0.84 Yes 47 71.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40994144 + NM_001164269 RAD51 0 . . . 1.49 68.06 26 6.16 Yes 47 0.71 No 0 0 No -24 0.38 No 48 79.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7587700 - NM_000546 TP53 0 . . . 1.31 0 17 4.8 No 1 0.57 No 0 0 No -39 0.36 No 36 82.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41026002 + NM_001164269 RAD51 0 . . . 0.85 74.47 16 4.02 No 4 0.1 No 0 0 No -42 0.93 Yes 54 83.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215591183 - NM_000465 BARD1 0 . . . 4.51 81.28 13 5.48 No 52 0.69 No 0 0 No -23 0.75 Yes 51 34.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68900943 + NM_133509 RAD51B 0 . . . 8.52 87.11 24 5.1 No 73 0.08 No 0 0 No -20 0.48 No 46 73.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131956067 + NM_005732 RAD50 0 . . . 6.48 77.67 29 5.91 Yes 65 1.23 Yes 0 0 No -28 0.77 Yes 44 56.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59805566 - NM_032043 BRIP1 0 . . . 2.45 62.49 15 3.99 No 6 1.01 Yes 0 0 No -40 0.72 Yes 40 66.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59917575 - NM_032043 BRIP1 0 . . . 0.26 64.75 20 4.21 No 76 1.12 Yes 0 0 No -25 0.45 No 45 59.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68771717 + NM_133509 RAD51B 0 . . . 1.81 69.89 39 7.05 Yes 19 1.45 Yes 0 0 No -38 0.56 No 38 61.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59883851 - NM_032043 BRIP1 0 . . . 5.46 74.92 22 3.83 No 72 0.89 Yes 0 0 No -21 0.82 Yes 41 85.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37082622 + NM_000249 MLH1 0 . . . 2.88 67.85 33 6.24 Yes 67 -2.38 No 0 0 No -32 0.56 No 43 70.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69112741 + NM_133509 RAD51B 0 . . . 3.36 77.62 15 5 No 45 0.45 No 0 0 No -23 0.55 No 35 84.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68303689 + NM_133509 RAD51B 0 . . . 5.48 72.78 18 4.9 No 22 0.54 No 0 0 No -26 0.62 No 50 28.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190678868 + NM_000534 PMS1 0 . . . 3.19 77.08 50 7.21 Yes 7 1.9 Yes 0 0 No -22 0.78 Yes 51 77.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131940998 + NM_005732 RAD50 0 . . . 2.78 70.85 33 6 Yes 13 0.85 Yes 0 0 No -24 0.78 Yes 40 82.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68609390 + NM_133509 RAD51B 0 . . . 1.04 67.74 25 4.85 No 76 1.02 Yes 0 0 No -21 0.57 No 46 69.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68417246 + NM_133509 RAD51B 0 . . . 6.03 84.64 17 4.25 No 18 0.34 No 0 0 No -22 0.32 No 40 86.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59903035 - NM_032043 BRIP1 0 . . . 1.3 0 26 5.42 No 59 1.18 Yes 0 0 No -22 0.82 Yes 48 60.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68472271 + NM_133509 RAD51B 0 . . . 5.22 80.84 21 5.2 No 8 1.02 Yes 0 0 No -20 0.87 Yes 50 56.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47689294 + NM_000251 MSH2 0 . . . 5.24 73.37 17 5.89 Yes 16 0.69 No 0 0 No -16 0.28 No 42 94.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68982350 + NM_133509 RAD51B 0 . . . 3.85 83.86 12 5.74 Yes 69 0.8 Yes 0 0 No -26 0.32 No 34 61.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68501283 + NM_133509 RAD51B 0 . . . 0.05 73.73 22 5.74 Yes 41 1.36 Yes 0 0 No -21 0.91 Yes 48 54.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48015350 + NM_000179 MSH6 0 . . . 0.59 0 29 6.11 Yes 14 0.37 No 0 0 No -28 0.79 Yes 40 31.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6010692 - NM_000535 PMS2 0 . . . 4.28 65.53 21 3.55 No 59 1.05 Yes 0 0 No -23 0.46 No 46 23.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68435784 + NM_133509 RAD51B 0 . . . 2.16 62.75 22 4.9 No 1 0.12 No 0 0 No -21 0.49 No 48 24.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105189644 + NM_021930 RINT1 0 . . . 0.46 74.26 24 3.44 No 32 1.08 Yes 0 0 No -23 0.38 No 40 33.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69119103 + NM_133509 RAD51B 0 . . . 8.01 88.69 34 5.86 Yes 40 1.98 Yes 0 0 No -33 0.84 Yes 18 49.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68608701 + NM_133509 RAD51B 0 . . . 7.45 81.94 26 8.39 Yes 25 0.64 No 0 0 No -25 0.8 Yes 37 80.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59764280 - NM_032043 BRIP1 0 . . . 1.38 70.96 20 5.05 No 14 0.54 No 0 0 No -34 0.46 No 44 86.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94192165 - NM_005591 MRE11 0 . . . 1.75 69.54 21 5.66 Yes 67 0.05 No 0 0 No -20 0.79 Yes 56 29.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94172472 - NM_005591 MRE11 0 . . . 5.11 82.78 10 4.79 No 25 0.91 Yes 0 0 No -20 0.64 No 41 48.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1208661 + NM_000455 STK11 0 . . . 5.7 90.92 35 6 Yes 3 0.81 Yes 0 0 No -34 0.48 No 11 44.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56770068 + NM_058216 RAD51C 0 . . . 7.22 80.99 23 5.15 No 7 0.56 No 0 0 No -22 0.69 Yes 51 75.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68838037 + NM_004360 CDH1 0 . . . 4.74 84.41 31 3.93 No 35 0.84 Yes 0 0 No -26 0.48 No 23 91.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215608550 - NM_000465 BARD1 0 . . . 0.78 67.3 28 5.38 No 61 -3.58 No 0 0 No -27 0.82 Yes 54 79.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90991865 - NM_002485 NBN 0 . . . 0.11 67.94 23 5.39 No 75 0.58 No 0 0 No -23 0.72 Yes 39 67.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68723394 + NM_133509 RAD51B 0 . . . 0.16 0 21 7.17 Yes 56 1.33 Yes 0 0 No -20 0.78 Yes 14 57.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68743482 + NM_133509 RAD51B 0 . . . 3.99 62.92 19 4.58 No 48 -2.78 No 0 0 No -18 0.64 No 41 56.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33440817 - NM_002878 RAD51D 0 . . . 0.09 0 9 3.87 No 7 0.4 No 0 0 No -27 0.95 Yes 51 54.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68976434 + NM_133509 RAD51B 0 . . . 0.86 81.82 9 3.87 No 59 0.21 No 0 0 No -25 0.81 Yes 50 66.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131901851 + NM_005732 RAD50 0 . . . 3.55 75.97 32 6.05 Yes 9 0.51 No 0 0 No -31 0.56 No 43 48.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68806386 + NM_133509 RAD51B 0 . . . 3.96 90.43 22 6.45 Yes 67 1.16 Yes 0 0 No -29 0.43 No 51 60.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59831920 - NM_032043 BRIP1 0 . . . 5.78 79.66 42 6.62 Yes 5 1.22 Yes 0 0 No -26 0.6 No 47 78.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68965501 + NM_133509 RAD51B 0 . . . 0.65 66.51 13 4.79 No 49 1.02 Yes 0 0 No -16 0.37 No 47 71.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215648532 - NM_000465 BARD1 0 . . . 0.01 61.26 12 5.74 Yes 44 0.28 No 0 0 No -27 0.44 No 50 51.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131966833 + NM_005732 RAD50 0 . . . 8.36 85.05 15 5.1 No 13 1.73 Yes 0 0 No -25 0.29 No 45 97.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41020321 + NM_001164269 RAD51 0 . . . 1.96 64.93 35 6.4 Yes 23 1.01 Yes 0 0 No -34 0.58 No 35 42.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68674327 + NM_133509 RAD51B 0 . . . 0.74 54.58 21 4.58 No 52 -1.96 No 0 0 No -20 0.62 No 49 47.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23639819 - NM_024675 PALB2 0 . . . 5.64 90.97 33 5.83 Yes 65 1.09 Yes 0 0 No -32 0.74 Yes 48 75.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84385450 - NM_139076 FAM175A 0 . . . 2.85 77.9 20 4.9 No 52 0.67 No 0 0 No -19 0.64 No 49 83.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75489882 - NM_001040108 MLH3 0 . . . 4.32 75.53 21 5.83 Yes 47 0.43 No 0 0 No -20 0.67 Yes 43 81.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48027093 + NM_000179 MSH6 0 . . . 3.81 83.81 23 4.78 No 0 0.03 No 0 0 No -22 0.97 Yes 40 80.96 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6017821 - NM_000535 PMS2 0 . . . 3.9 71.57 26 6.24 Yes 0 0.23 No 0 0 No -25 0.61 No 44 67.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47697808 + NM_000251 MSH2 0 . . . 4.9 65.31 29 5.53 No 68 0.8 Yes 0 0 No -28 0.52 No 34 37.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68613215 + NM_133509 RAD51B 0 . . . 2.12 76.17 31 5.99 Yes 74 0.95 Yes 0 0 No -30 0.62 No 48 72.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68323324 + NM_133509 RAD51B 0 . . . 3.8 81.41 16 5.52 No 71 0.34 No 0 0 No -28 0.5 No 32 71.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69135426 + NM_133509 RAD51B 0 . . . 3.46 0 25 5.63 Yes 26 0.21 No 0 0 No -24 0.55 No 36 63.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59924757 - NM_032043 BRIP1 0 . . . 8.29 79.13 25 6.22 Yes 13 0.11 No 0 0 No -24 0.85 Yes 45 72.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89698877 + NM_000314 PTEN 0 . . . 2.9 81.24 13 4.36 No 65 -5.04 No 0 0 No -20 0.59 No 48 68.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32951703 + NM_000059 BRCA2 0 . . . 1.32 0 23 5.23 No 63 -4.38 No 0 0 No -22 0.87 Yes 48 58.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45797841 - NM_001048171 MUTYH 0 . . . 0.69 63.85 15 5.47 No NA NA NA 0 0 No -54 0.79 Yes 62 26.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105204716 + NM_021930 RINT1 0 . . . 3.6 85.02 41 8.22 Yes 66 1.49 Yes 0 0 No -40 0.71 Yes 45 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89674779 + NM_000314 PTEN 0 . . . 0.07 0 31 6 Yes 45 1.12 Yes 0 0 No -30 0.93 Yes 13 45.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47745800 + NM_000251 MSH2 0 . . . 0.27 0 14 5.29 No 0 -1.88 No 0 0 No -24 0.43 No 58 28.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215649372 - NM_000465 BARD1 0 . . . 5.65 91.83 40 5.76 Yes 48 0.86 Yes 0 0 No -32 0.56 No 46 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68480942 + NM_133509 RAD51B 0 . . . 9.77 83.79 58 8.84 Yes 65 -0.56 No 0 0 No -23 0.84 Yes 37 31.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68781474 + NM_004360 CDH1 0 . . . 3.85 77.46 24 5.2 No 12 1.07 Yes 0 0 No -23 0.83 Yes 46 79.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131941358 + NM_005732 RAD50 0 . . . 4.27 72.21 31 4.74 No 29 1.18 Yes 0 0 No -30 0.66 No 48 71.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68657318 + NM_133509 RAD51B 0 . . . 3.06 68.77 48 5.98 Yes 64 1.02 Yes 0 0 No -35 0.51 No 40 47.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68695771 + NM_133509 RAD51B 0 . . . 2.67 67.51 25 5 No 60 1.07 Yes 0 0 No -23 0.31 No 27 71.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32944846 + NM_000059 BRCA2 0 . . . 0.81 65.88 20 5.57 Yes 16 0.56 No 0 0 No -19 0.62 No 42 82.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41205841 - NM_007294 BRCA1 0 . . . 1.29 68.06 25 5.88 Yes 47 0.72 No 0 0 No -29 0.63 No 48 79.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131933244 + NM_005732 RAD50 0 . . . 1.13 72.01 32 8.36 Yes 74 2.71 Yes 0 0 No -31 0.73 Yes 14 78.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108122161 + NM_000051 ATM 0 . . . 8.88 86.61 16 4.69 No 67 -3.39 No 0 0 No -40 0.59 No 40 73.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108142440 + NM_000051 ATM 0 . . . 3.37 73.49 18 4.9 No 8 0.18 No 0 0 No -23 0.74 Yes 45 70.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215601911 - NM_000465 BARD1 0 . . . 1.25 0 26 5.48 No 40 1.07 Yes 0 0 No -23 0.33 No 18 76.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59917474 - NM_032043 BRIP1 0 . . . 2.96 68.34 35 6.34 Yes 23 1.62 Yes 0 0 No -34 0.8 Yes 35 74.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47805278 + NM_000251 MSH2 0 . . . 4.43 78.62 24 5.18 No 13 0.26 No 0 0 No -23 0.84 Yes 45 95.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68403692 + NM_133509 RAD51B 0 . . . 0.15 61.77 16 5.59 Yes 9 0.8 Yes 0 0 No -24 0.63 No 41 42.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47706339 + NM_000251 MSH2 0 . . . 4.34 79.09 12 6.08 Yes 27 0.32 No 0 0 No -22 0.59 No 42 58.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90985123 - NM_002485 NBN 0 . . . 4.92 73.85 20 5.1 No 69 0.72 No 0 0 No -27 0.64 No 47 70.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59894877 - NM_032043 BRIP1 0 . . . 4.96 80.9 14 4.47 No 6 1.44 Yes 0 0 No -22 0.69 Yes 46 63.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215590838 - NM_000465 BARD1 0 . . . 4.06 70.7 27 5.46 No 2 0.73 No 0 0 No -26 0.85 Yes 43 76.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69091538 + NM_133509 RAD51B 0 . . . 6.7 80.73 22 4.38 No 12 1.39 Yes 0 0 No -37 0.69 Yes 46 96.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29103780 - NM_001005735 CHEK2 0 . . . 3.73 84.03 25 6.07 Yes 10 0.36 No 0 0 No -24 0.66 No 48 94.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68891822 + NM_133509 RAD51B 0 . . . 1.21 72.87 29 4.78 No 63 -2.26 No 0 0 No -28 0.59 No 48 50.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29089680 - NM_001005735 CHEK2 0 . . . 7.95 86.16 30 5.65 Yes 69 0.71 No 0 0 No -29 0.64 No 50 72.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1217380 + NM_000455 STK11 0 . . . 3.6 85.02 25 6.9 Yes 4 1.2 Yes 0 0 No -24 0.31 No 43 66.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59772655 - NM_032043 BRIP1 0 . . . 3.88 80.39 22 6.16 Yes 73 -6.15 No 0 0 No -21 0.75 Yes 46 52.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131897069 + NM_005732 RAD50 0 . . . 4.22 87.49 43 7.16 Yes 7 1.02 Yes 0 0 No -26 0.85 Yes 51 82.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68740591 + NM_133509 RAD51B 0 . . . 5.97 66.11 26 5 No 59 -3.14 No 0 0 No -25 0.87 Yes 49 67.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190678647 + NM_000534 PMS1 0 . . . 0.47 77.48 17 3.67 No 73 0.26 No 0 0 No -20 0.46 No 17 25.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47692051 + NM_000251 MSH2 0 . . . 3.09 75.65 50 8.37 Yes 34 0.82 Yes 0 0 No -42 0.53 No 46 42.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68693659 + NM_133509 RAD51B 0 . . . 11.3 95.65 15 5.72 Yes 47 0.47 No 0 0 No -31 0.34 No 46 79.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108195186 + NM_000051 ATM 0 . . . 1.3 72.43 49 9.17 Yes 22 0.88 Yes 0 0 No -24 0.52 No 46 85.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68575699 + NM_133509 RAD51B 0 . . . 4.51 82.56 14 5 No 65 1.01 Yes 0 0 No -47 0.8 Yes 34 50.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108146050 + NM_000051 ATM 0 . . . 4.14 72.91 28 6.32 Yes 19 1.59 Yes 0 0 No -27 0.81 Yes 39 89.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108200776 + NM_000051 ATM 0 . . . 2.16 71.51 30 5.47 No 76 -3.53 No 0 0 No -29 0.58 No 47 91.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6041920 - NM_000535 PMS2 0 . . . 2.77 0 26 5.66 Yes 67 0.63 No 0 0 No -25 0.81 Yes 49 53.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68969825 + NM_133509 RAD51B 0 . . . 1.57 76.72 55 7.08 Yes 65 1.87 Yes 0 0 No -29 0.66 No 51 65.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94208604 - NM_005591 MRE11 0 . . . 5.36 79.85 23 4.8 No 7 0.4 No 0 0 No -22 0.74 Yes 51 80.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69069484 + NM_133509 RAD51B 0 . . . 0.19 74.98 21 5.2 No 14 0.23 No 0 0 No -20 0.53 No 49 61.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68626383 + NM_133509 RAD51B 0 . . . 1.9 67.59 13 4.27 No 55 0.4 No 0 0 No -34 0.96 Yes 40 22.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41215321 - NM_007294 BRCA1 0 . . . 1.72 64.87 28 5.23 No 68 0.53 No 0 0 No -25 0.54 No 44 31.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68526222 + NM_133509 RAD51B 0 . . . 6.7 73.37 18 4.82 No 51 1.37 Yes 0 0 No -25 0.45 No 36 75.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68745510 + NM_133509 RAD51B 0 . . . 0.66 74 31 5.62 Yes 44 1.25 Yes 0 0 No -30 0.87 Yes 48 89.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68313705 + NM_133509 RAD51B 0 . . . 6.1 81.98 12 5.39 No 50 1.05 Yes 0 0 No -54 0.44 No 29 70.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89694182 + NM_000314 PTEN 0 . . . 5.15 68.19 57 7.87 Yes 11 1.18 Yes 0 0 No -24 0.88 Yes 23 86.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90967106 - NM_002485 NBN 0 . . . 7.47 76.22 18 4.88 No 46 0.64 No 0 0 No -21 0.36 No 39 85.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56796025 + NM_058216 RAD51C 0 . . . 5.11 65.22 21 6.2 Yes 64 -5.49 No 0 0 No -26 0.87 Yes 44 54.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68783646 + NM_004360 CDH1 0 . . . 0.76 79.34 33 5.83 Yes 22 -1.7 No 0 0 No -32 0.66 No 49 47.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68703943 + NM_133509 RAD51B 0 . . . 2.34 68.87 26 5.57 Yes -2 1 Yes 0 0 No -25 0.6 No 41 90.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108230750 + NM_000051 ATM 0 . . . 1.31 81.52 16 4.25 No 65 -4.38 No 0 0 No -28 0.83 Yes 53 35.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29135593 - NM_001005735 CHEK2 0 . . . 2.11 68.3 19 4.63 No 16 1.58 Yes 0 0 No -47 0.38 No 42 96.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68316184 + NM_133509 RAD51B 0 . . . 1.98 80.26 27 5.39 No 8 0.86 Yes 0 0 No -19 0.52 No 50 85.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69131195 + NM_133509 RAD51B 0 . . . 1.53 77.29 31 5.42 No 75 0.7 No 0 0 No -27 0.48 No 44 38.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190693250 + NM_000534 PMS1 0 . . . 0.21 64.83 35 4.77 No 76 0.44 No 0 0 No -29 0.86 Yes 43 48.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68810322 + NM_004360 CDH1 0 . . . 1 73.25 19 5.74 Yes 75 0.1 No 0 0 No -18 0.54 No 49 78.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68792228 + NM_004360 CDH1 0 . . . 3.75 71.7 12 5.1 No 24 0.93 Yes 0 0 No -27 0.87 Yes 33 43.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68348139 + NM_133509 RAD51B 0 . . . 1.16 62.8 40 6.32 Yes 24 1.44 Yes 0 0 No -39 0.59 No 34 74.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32949588 + NM_000059 BRCA2 0 . . . 1 55.56 27 5.2 No 21 0.86 Yes 0 0 No -26 0.58 No 37 84.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59782831 - NM_032043 BRIP1 0 . . . 0.79 71.8 20 5.1 No 6 0.32 No 0 0 No -27 0.62 No 45 77.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68444838 + NM_133509 RAD51B 0 . . . 0.31 75.2 25 6.78 Yes 52 0.83 Yes 0 0 No -27 0.61 No 34 55.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56795939 + NM_058216 RAD51C 0 . . . 7.29 84.83 16 5.92 Yes 54 1.08 Yes 0 0 No -31 0.65 No 31 50.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84394239 - NM_139076 FAM175A 0 . . . 5.36 76.28 48 7.35 Yes 33 1.07 Yes 0 0 No -47 0.51 No 25 86.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89708064 + NM_000314 PTEN 0 . . . 3.4 78.07 17 5 No 9 0.9 Yes 0 0 No -31 0.93 Yes 49 89.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59778749 - NM_032043 BRIP1 0 . . . 2.84 70.48 41 5.89 Yes -4 0.24 No 0 0 No -21 0.51 No 45 86.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68850616 + NM_133509 RAD51B 0 . . . 7.15 89.05 45 7.41 Yes 22 0.57 No 0 0 No -22 0.73 Yes 40 65.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68629382 + NM_133509 RAD51B 0 . . . 0.36 61.05 21 4.65 No 56 1.01 Yes 0 0 No -25 0.63 No 42 51.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68769573 + NM_004360 CDH1 0 . . . 2.3 84.41 20 4.52 No 43 0.87 Yes 0 0 No -36 0.53 No 44 84.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94202508 - NM_005591 MRE11 0 . . . 1.15 68.35 16 8.15 Yes 39 0.88 Yes 0 0 No -36 0.67 Yes 19 42.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89677840 + NM_000314 PTEN 0 . . . 6.14 88.68 24 5.91 Yes 52 1.47 Yes 0 0 No -27 0.32 No 49 95.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68347970 + NM_133509 RAD51B 0 . . . 5.25 64.2 38 7.06 Yes 0 1.01 Yes 0 0 No -33 0.48 No 39 77.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68400279 + NM_133509 RAD51B 0 . . . 4.66 78.67 31 5.05 No 54 0.14 No 0 0 No -30 0.32 No 51 46.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68419734 + NM_133509 RAD51B 0 . . . 1.98 0 15 4.36 No 16 0.5 No 0 0 No -17 0.43 No 42 84.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47760945 + NM_000251 MSH2 0 . . . 7.72 86.1 22 4.79 No -4 0.3 No 0 0 No -21 0.91 Yes 35 65.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32925584 + NM_000059 BRCA2 0 . . . 1.55 70.81 25 5.58 Yes 75 -4.93 No 0 0 No -24 0.83 Yes 54 50.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131980210 + NM_005732 RAD50 0 . . . 4.7 81.74 22 5.2 No 57 0.53 No 0 0 No -21 0.71 Yes 40 34.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68846970 + NM_004360 CDH1 0 . . . 2.23 0 12 4.75 No 16 0.51 No 0 0 No -23 0.35 No 42 83.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33432855 - NM_002878 RAD51D 0 . . . 2.71 85.03 29 7.35 Yes 51 0.31 No 0 0 No -28 0.94 Yes 15 30.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131942110 + NM_005732 RAD50 0 . . . 1.85 0 31 5.66 Yes 67 0.16 No 0 0 No -23 0.4 No 45 33.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90944749 - NM_002485 NBN 0 . . . 7.08 76.27 15 4.58 No 76 0.89 Yes 0 0 No -14 0.45 No 41 93.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108146715 + NM_000051 ATM 0 . . . 10.32 87.93 24 5.39 No 31 0.65 No 0 0 No -23 0.53 No 39 78.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68682408 + NM_133509 RAD51B 0 . . . 2.57 63.69 20 5.11 No 48 0.77 Yes 0 0 No -27 0.64 No 25 44.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23644601 - NM_024675 PALB2 0 . . . 3.52 60.94 34 5.7 Yes 67 1.34 Yes 0 0 No -20 0.68 Yes 56 24.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68458147 + NM_133509 RAD51B 0 . . . 0.31 77 28 4.31 No 35 1.76 Yes 0 0 No -30 0.78 Yes 23 81.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90998441 - NM_002485 NBN 0 . . . 3.04 60.12 105 7.91 Yes 20 0.7 No 0 0 No -36 0.73 Yes 43 53.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68805074 + NM_004360 CDH1 0 . . . 9.47 86.71 51 8.89 Yes 65 -2.74 No 0 0 No -50 0.74 Yes 45 78.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90976397 - NM_002485 NBN 0 . . . 3.9 81.87 83 7.83 Yes 5 0.36 No 0 0 No -39 0.65 No 47 62.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7569056 - NM_000546 TP53 0 . . . 0.89 73.91 21 6.4 Yes -4 0.11 No 0 0 No -30 0.44 No 54 38.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668040 - NM_000465 BARD1 0 . . . 4.64 81.98 11 3.35 No -1 0.61 No 0 0 No -27 0.64 No 53 52.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90944776 - NM_002485 NBN 0 . . . 6.59 75 28 5.55 No 49 0.87 Yes 0 0 No -27 0.66 No 43 67.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68792909 + NM_004360 CDH1 0 . . . 0.11 74.73 35 6.78 Yes 33 1.23 Yes 0 0 No -34 0.83 Yes 25 70.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68309986 + NM_133509 RAD51B 0 . . . 4.85 81.25 30 5.87 Yes 76 -2.81 No 0 0 No -29 0.65 No 47 88.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68866190 + NM_004360 CDH1 0 . . . 2.05 58.06 33 5.57 Yes 50 0.2 No 0 0 No -21 0.4 No 37 46.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68602856 + NM_133509 RAD51B 0 . . . 3.94 81.2 24 5.1 No 50 1.17 Yes 0 0 No -21 0.73 Yes 46 41.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68390561 + NM_133509 RAD51B 0 . . . 2.42 75.81 32 5.51 No 43 -1.82 No 0 0 No -34 0.49 No 52 77.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68622397 + NM_133509 RAD51B 0 . . . 1.4 57.94 19 5 No 40 -3.07 No 0 0 No -44 0.89 Yes 44 61.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68985088 + NM_133509 RAD51B 0 . . . 7.18 82.5 21 5.1 No 43 1.32 Yes 0 0 No -23 0.64 No 47 71.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47672763 + NM_000251 MSH2 0 . . . 3.1 0 27 5.74 Yes 17 1.59 Yes 0 0 No -26 0.82 Yes 41 70.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94180889 - NM_005591 MRE11 0 . . . 2.97 0 18 4.58 No 2 1 Yes 0 0 No -18 0.27 No 38 69.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47684910 + NM_000251 MSH2 0 . . . 5.55 87.63 20 5.74 Yes 12 0.96 Yes 0 0 No -19 0.8 Yes 46 89.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21992134 - NM_000077 CDKN2A 0 . . . 7.12 77.2 34 5.89 Yes 0 1.02 Yes 0 0 No -29 0.59 No 44 45.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69033390 + NM_133509 RAD51B 0 . . . 2.63 71.69 26 4.87 No 52 -3.5 No 0 0 No -26 0.88 Yes 24 29.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89712408 + NM_000314 PTEN 0 . . . 6.56 78.55 16 4.85 No 65 -2.24 No 0 0 No -29 0.72 Yes 52 41.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68445879 + NM_133509 RAD51B 0 . . . 5.73 83.51 27 5.33 No 60 -4.86 No 0 0 No -26 0.82 Yes 44 92.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69062362 + NM_133509 RAD51B 0 . . . 4.73 73.35 18 5.29 No 29 1.06 Yes 0 0 No -23 0.53 No 51 61.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68616581 + NM_133509 RAD51B 0 . . . 3.16 82.5 18 4.61 No 8 0.59 No 0 0 No -26 0.45 No 50 93.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59775466 - NM_032043 BRIP1 0 . . . 0.36 71.08 21 4.46 No 72 -5.67 No 0 0 No -20 0.49 No 49 67.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68774981 + NM_133509 RAD51B 0 . . . 8.18 89.97 13 4.76 No 69 0.87 Yes 0 0 No -22 0.49 No 44 96.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68945692 + NM_133509 RAD51B 0 . . . 0.24 63.78 13 4.5 No 66 0.65 No 0 0 No -40 0.45 No 42 81.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41241437 - NM_007294 BRCA1 0 . . . 1.15 81.35 23 5.29 No 12 0.03 No 0 0 No -22 0.83 Yes 41 57.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48019566 + NM_000179 MSH6 0 . . . 5.68 78.78 16 4.47 No -4 0.69 No 0 0 No -23 0.7 Yes 38 43.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68903414 + NM_133509 RAD51B 0 . . . 8.12 80.79 10 4 No -1 1.23 Yes 0 0 No -34 0.83 Yes 16 49.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68816311 + NM_133509 RAD51B 0 . . . 2.95 78.41 18 4.9 No 51 1 Yes 0 0 No -49 0.31 No 24 40.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41000521 + NM_001164269 RAD51 0 . . . 5.79 86.2 13 5.19 No 52 1.24 Yes 0 0 No -22 0.55 No 54 70.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68929505 + NM_133509 RAD51B 0 . . . 0.73 69.34 20 6.24 Yes 73 1.38 Yes 0 0 No -19 0.85 Yes 46 26.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68738526 + NM_133509 RAD51B 0 . . . 3.31 69.1 32 4.74 No 73 -4.84 No 0 0 No -31 0.73 Yes 45 48.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69054867 + NM_133509 RAD51B 0 . . . 2.76 75.71 25 5.04 No 17 0.91 Yes 0 0 No -26 0.61 No 41 84.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68621166 + NM_133509 RAD51B 0 . . . 8.24 86.53 26 5.32 No 72 0.1 No 0 0 No -25 0.77 Yes 52 53.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68695672 + NM_133509 RAD51B 0 . . . 3.08 64.95 72 8.4 Yes 18 1.07 Yes 0 0 No -24 0.32 No 48 79.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47684182 + NM_000251 MSH2 0 . . . 0.62 65.58 22 4.87 No 3 1.19 Yes 0 0 No -21 0.94 Yes 39 91.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215590925 - NM_000465 BARD1 0 . . . 1.47 61.03 14 4.3 No 42 1.58 Yes 0 0 No -30 0.32 No 23 52.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108209965 + NM_000051 ATM 0 . . . 1.53 70.06 28 5.33 No 73 0.49 No 0 0 No -42 0.59 No 51 62.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108099298 + NM_000051 ATM 0 . . . 5.02 0 25 5.39 No 2 0.27 No 0 0 No -24 0.61 No 45 85.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94152782 - NM_005591 MRE11 0 . . . 3.73 83.14 32 4.38 No 20 0.05 No 0 0 No -27 0.41 No 46 70.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29118922 - NM_001005735 CHEK2 0 . . . 0.67 72.27 26 5.38 No 33 0.43 No 0 0 No -25 0.78 Yes 25 44.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68376440 + NM_133509 RAD51B 0 . . . 3.35 90.11 17 4.51 No 60 0.05 No 0 0 No -26 0.46 No 48 62.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131960314 + NM_005732 RAD50 0 . . . 1.96 86.67 14 5.74 Yes 5 0.26 No 0 0 No -26 0.66 No 36 35.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190727123 + NM_000534 PMS1 0 . . . 2.69 70.69 22 4.9 No 37 1.27 Yes 0 0 No -21 0.93 Yes 51 51.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68307637 + NM_133509 RAD51B 0 . . . 1.01 83.85 29 4.43 No 33 1.12 Yes 0 0 No -28 0.7 Yes 50 68.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68635831 + NM_133509 RAD51B 0 . . . 2.23 77.24 9 3.87 No -2 0.58 No 0 0 No -43 0.4 No 37 52.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68803402 + NM_004360 CDH1 0 . . . 1.02 0 21 5 No -1 -2.04 No 0 0 No -26 0.37 No 25 80.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1220936 + NM_000455 STK11 0 . . . 1.91 0 22 5.53 No 53 0.01 No 0 0 No -26 0.45 No 37 33.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190735916 + NM_000534 PMS1 0 . . . 2.61 73.68 25 5 No 9 1.01 Yes 0 0 No -24 0.91 Yes 46 66.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37052149 + NM_000249 MLH1 0 . . . 0.64 84.22 26 4.23 No 32 1 Yes 0 0 No -25 0.94 Yes 26 40.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59911520 - NM_032043 BRIP1 0 . . . 0.08 73.4 22 5.06 No 52 -1.75 No 0 0 No -26 0.74 Yes 21 50.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59868590 - NM_032043 BRIP1 0 . . . 2.78 81.9 17 6.48 Yes 37 1.56 Yes 0 0 No -25 0.7 Yes 31 69.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131903245 + NM_005732 RAD50 0 . . . 0.32 77.98 34 7.22 Yes 66 -5.2 No 0 0 No -33 0.6 No 51 85.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68848850 + NM_133509 RAD51B 0 . . . 0.74 73.54 17 6.08 Yes 32 0.46 No 0 0 No -16 0.79 Yes 45 87.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68489819 + NM_133509 RAD51B 0 . . . 5.75 68.8 25 4.88 No 15 0.84 Yes 0 0 No -28 0.57 No 43 49.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68450358 + NM_133509 RAD51B 0 . . . 3.96 67.43 12 5.39 No 34 -3.56 No 0 0 No -22 0.71 Yes 43 52.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68669319 + NM_133509 RAD51B 0 . . . 3.97 84.41 14 6.46 Yes 32 0.54 No 0 0 No -28 0.72 Yes 35 77.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84397162 - NM_139076 FAM175A 0 . . . 2.68 79.24 15 4.58 No 32 0.99 Yes 0 0 No -21 0.48 No 26 50.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21989121 - NM_000077 CDKN2A 0 . . . 2.14 64.12 42 8.96 Yes 45 0.9 Yes 0 0 No -41 0.65 No 38 59.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105170757 + NM_021930 RINT1 0 . . . 3.19 78.17 23 6.71 Yes 5 0.05 No 0 0 No -22 0.46 No 52 44.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47745546 + NM_000251 MSH2 0 . . . 2.43 76.23 25 5.37 No 4 1.2 Yes 0 0 No -25 0.55 No 43 57.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59893320 - NM_032043 BRIP1 0 . . . 5.89 76.59 24 5.36 No 7 0.06 No 0 0 No -23 0.92 Yes 46 70.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6039813 - NM_000535 PMS2 0 . . . 5.82 87.43 29 6.02 Yes 32 1.27 Yes 0 0 No -31 0.68 Yes 26 82.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68692572 + NM_133509 RAD51B 0 . . . 0.22 61.97 20 5.1 No 58 1.36 Yes 0 0 No -19 0.66 No 59 31.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47803534 + NM_000251 MSH2 0 . . . 0.96 75.56 26 4.69 No 42 0.69 No 0 0 No -25 0.87 Yes 46 44.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215633375 - NM_000465 BARD1 0 . . . 0.27 66.58 12 5.2 No 73 -6.38 No 0 0 No -28 0.34 No 50 43.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215646545 - NM_000465 BARD1 0 . . . 3.05 76.86 30 5.48 No -4 0.13 No 0 0 No -29 0.75 Yes 47 72.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89670036 + NM_000314 PTEN 0 . . . 5.7 77.58 36 5.97 Yes 15 0.32 No 0 0 No -25 0.6 No 43 66.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152346686 - NM_005431 XRCC2 0 . . . 0.01 65.61 22 2.79 No 46 -2.18 No 0 0 No -32 0.38 No 32 64.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68328485 + NM_133509 RAD51B 0 . . . 0.13 69.78 14 6.99 Yes 1 0.92 Yes 0 0 No -20 0.43 No 15 27.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215604054 - NM_000465 BARD1 0 . . . 3.49 68.73 29 7.53 Yes 17 1.06 Yes 0 0 No -28 0.94 Yes 41 75.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68509406 + NM_133509 RAD51B 0 . . . 2.29 76.69 22 6.32 Yes 4 0.45 No 0 0 No -21 0.86 Yes 46 47.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59926732 - NM_032043 BRIP1 0 . . . 6.9 80 22 7.26 Yes -3 0.46 No 0 0 No -21 0.91 Yes 48 65.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69069874 + NM_133509 RAD51B 0 . . . 5.55 73.24 13 5.45 No 61 1.38 Yes 0 0 No -19 0.4 No 48 75.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131900314 + NM_005732 RAD50 0 . . . 1.13 66.77 13 6.24 Yes 0 0.39 No 0 0 No -32 0.14 No 34 36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47648095 + NM_000251 MSH2 0 . . . 2.5 64.96 13 4.36 No 57 -4.07 No 0 0 No -35 0.66 No 42 68.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37042610 + NM_000249 MLH1 0 . . . 4.93 73.06 21 5 No 9 0.87 Yes 0 0 No -23 0.49 No 46 57.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68786132 + NM_004360 CDH1 0 . . . 0.06 83.82 19 6 Yes 37 1.55 Yes 0 0 No -18 0.82 Yes 26 46.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108154239 + NM_000051 ATM 0 . . . 3.13 0 28 4.21 No 52 0.63 No 0 0 No -23 0.88 Yes 43 70.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68833774 + NM_004360 CDH1 0 . . . 3.18 77.78 42 7.48 Yes 25 0.66 No 0 0 No -29 0.35 No 46 36.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52443325 - NM_004656 BAP1 0 . . . 3.73 81.02 25 5.38 No 72 1.5 Yes 0 0 No -22 0.67 Yes 53 52.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23646263 - NM_024675 PALB2 0 . . . 5.49 72.88 23 5.2 No 10 0.7 No 0 0 No -22 0.67 Yes 42 81.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45807708 - NM_001048171 MUTYH 0 . . . 2.99 79.65 19 4.69 No 54 0.06 No 0 0 No -18 0.42 No 47 51.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89689891 + NM_000314 PTEN 0 . . . 2.58 82.73 13 4.75 No 70 -4.22 No 0 0 No -21 0.53 No 37 52.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47710509 + NM_000251 MSH2 0 . . . 5.44 85.52 21 6.23 Yes 17 0.65 No 0 0 No -20 0.88 Yes 41 59.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68682705 + NM_133509 RAD51B 0 . . . 4.94 80.65 58 6.96 Yes 29 0.72 No 0 0 No -40 0.69 Yes 50 38.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68997487 + NM_133509 RAD51B 0 . . . 0.5 72.62 13 4.91 No 54 -5.67 No 0 0 No -25 0.58 No 39 40.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89708805 + NM_000314 PTEN 0 . . . 1.34 60.14 19 5.28 No -3 0.11 No 0 0 No -18 0.66 No 20 21.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41264473 - NM_007294 BRCA1 0 . . . 2.24 0 12 4.24 No 50 1.11 Yes 0 0 No -43 0.51 No 37 61.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104164685 - NM_001100119 XRCC3 0 . . . 8.84 85.22 22 5.66 Yes 68 0.73 No 0 0 No -21 0.76 Yes 44 62.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94180655 - NM_005591 MRE11 0 . . . 5.71 79.53 15 5.08 No 63 0.79 Yes 0 0 No -21 0.73 Yes 41 81.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75492898 - NM_001040108 MLH3 0 . . . 4.4 73.16 17 4.15 No 59 0.66 No 0 0 No -22 0.62 No 53 47.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68932348 + NM_133509 RAD51B 0 . . . 7.06 79.15 12 5.15 No 37 0.15 No 0 0 No -21 0.28 No 33 71.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108193091 + NM_000051 ATM 0 . . . 1.1 75.86 15 5 No 33 1.21 Yes 0 0 No -45 0.87 Yes 40 50.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47787245 + NM_000251 MSH2 0 . . . 6.55 81.76 30 5.48 No 37 0.55 No 0 0 No -29 0.96 Yes 52 80.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1210081 + NM_000455 STK11 0 . . . 6.87 86.1 18 6.4 Yes 62 1.31 Yes 0 0 No -28 0.42 No 35 82.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68834876 + NM_004360 CDH1 0 . . . 8.57 89.2 34 7.28 Yes 6 0.35 No 0 0 No -33 0.8 Yes 39 90.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89651092 + NM_000314 PTEN 0 . . . 1.21 79.67 24 5.84 Yes 76 0.7 No 0 0 No -23 0.56 No 49 57.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90971279 - NM_002485 NBN 0 . . . 4.98 69.31 34 6.63 Yes 61 0.34 No 0 0 No -30 0.56 No 43 88.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68870568 + NM_133509 RAD51B 0 . . . 5.27 83.77 27 5.04 No 20 0.86 Yes 0 0 No -22 0.48 No 31 71.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152358840 - NM_005431 XRCC2 0 . . . 2.06 72.28 20 4.8 No 48 -2.48 No 0 0 No -25 0.43 No 39 83.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68857061 + NM_004360 CDH1 0 . . . 5.28 84.18 19 5.28 No 3 1.28 Yes 0 0 No -18 0.53 No 55 39.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68801627 + NM_004360 CDH1 0 . . . 0.76 74.28 32 4.6 No 33 0.63 No 0 0 No -29 0.58 No 16 71.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94201756 - NM_005591 MRE11 0 . . . 1.69 0 18 6 Yes 68 -4.19 No 0 0 No -29 0.7 Yes 36 39.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7563619 - NM_000546 TP53 0 . . . 6.41 83.29 20 5 No 34 1.06 Yes 0 0 No -23 0.67 Yes 24 53.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68887048 + NM_133509 RAD51B 0 . . . 1.79 82.07 49 7.62 Yes 71 -3.62 No 0 0 No -48 0.36 No 49 74.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68448772 + NM_133509 RAD51B 0 . . . 0.78 84.22 25 4.84 No 33 1.13 Yes 0 0 No -22 0.49 No 50 54.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75501531 - NM_001040108 MLH3 0 . . . 2.97 82.25 20 6.63 Yes 13 1.58 Yes 0 0 No -19 0.72 Yes 45 76.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59830453 - NM_032043 BRIP1 0 . . . 4.16 80.47 20 4.9 No 68 -2.13 No 0 0 No -19 0.74 Yes 45 40.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68699196 + NM_133509 RAD51B 0 . . . 0.2 0 25 5.85 Yes 12 1.43 Yes 0 0 No -25 0.42 No 46 64.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68770159 + NM_133509 RAD51B 0 . . . 4.38 74.98 13 3.47 No 69 -4.79 No 0 0 No -16 0.77 Yes 48 57.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56796736 + NM_058216 RAD51C 0 . . . 0.44 68.4 25 8.61 Yes 52 1.06 Yes 0 0 No -24 0.91 Yes 48 82.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47665577 + NM_000251 MSH2 0 . . . 5.36 77.51 17 4.57 No 30 0.95 Yes 0 0 No -30 0.39 No 45 60.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215643236 - NM_000465 BARD1 0 . . . 2.78 70.23 30 4.45 No 13 0.56 No 0 0 No -25 0.93 Yes 28 50.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89683483 + NM_000314 PTEN 0 . . . 0.99 71.29 25 4.87 No 32 1.2 Yes 0 0 No -25 0.68 Yes 42 61.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56792332 + NM_058216 RAD51C 0 . . . 1.05 64.44 30 6.63 Yes 68 -3.29 No 0 0 No -22 0.84 Yes 39 75.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68742796 + NM_133509 RAD51B 0 . . . 1.91 0 19 4.8 No 20 0.62 No 0 0 No -21 0.4 No 47 78.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68721300 + NM_133509 RAD51B 0 . . . 2.69 63.75 31 4.66 No 60 0.68 No 0 0 No -23 0.49 No 46 61.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68416646 + NM_133509 RAD51B 0 . . . 2.89 86.73 91 6.04 Yes 33 0.41 No 0 0 No -39 0.77 Yes 46 63.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68782024 + NM_133509 RAD51B 0 . . . 7.07 86.14 40 7.07 Yes 18 0.04 No 0 0 No -33 0.81 Yes 45 40.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68574942 + NM_133509 RAD51B 0 . . . 1.74 67.36 23 4.6 No 56 -3.18 No 0 0 No -22 0.69 Yes 55 31.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59875187 - NM_032043 BRIP1 0 . . . 0 57.16 26 6.46 Yes 21 0.54 No 0 0 No -29 0.73 Yes 37 58.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69028658 + NM_133509 RAD51B 0 . . . 0.59 65.24 31 4.49 No 10 -1.71 No 0 0 No -53 0.42 No 12 42.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68718190 + NM_133509 RAD51B 0 . . . 1.43 59.81 18 4.9 No 21 -3.56 No 0 0 No -17 0.78 Yes 38 37.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32942610 + NM_000059 BRCA2 0 . . . 7.27 77.75 23 6.67 Yes 58 1.51 Yes 0 0 No -22 0.49 No 47 71.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56809515 + NM_058216 RAD51C 0 . . . 1.73 68.85 22 5 No 0 0.71 No 0 0 No -21 0.8 Yes 52 52.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460236 + NM_133509 RAD51B 0 . . . 3.51 70.43 31 5.83 Yes 23 0.89 Yes 0 0 No -30 0.92 Yes 35 49.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41249792 - NM_007294 BRCA1 0 . . . 4.15 66.31 53 8 Yes -3 0.25 No 0 0 No -26 0.93 Yes 42 76.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68790696 + NM_133509 RAD51B 0 . . . 0.04 0 23 6.15 Yes 72 -5.32 No 0 0 No -22 0.81 Yes 43 43.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37033398 + NM_000249 MLH1 0 . . . 0.21 0 32 7 Yes 17 1.51 Yes 0 0 No -31 0.72 Yes 41 87.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152347635 - NM_005431 XRCC2 0 . . . 1.66 68.66 12 5.2 No 43 0.51 No 0 0 No -20 0.68 Yes 49 87.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37092580 + NM_000249 MLH1 0 . . . 4.74 88.55 11 4.69 No 51 0.72 No 0 0 No -19 0.65 No 18 82.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21974979 - NM_000077 CDKN2A 0 . . . 3.62 79.65 22 4.8 No 29 1.71 Yes 0 0 No -21 0.94 Yes 29 73.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68427854 + NM_133509 RAD51B 0 . . . 0.58 62.62 17 4.58 No 15 0.73 No 0 0 No -16 0.47 No 38 76.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68559744 + NM_133509 RAD51B 0 . . . 3.76 69.29 21 3.57 No 8 0.55 No 0 0 No -20 0.76 Yes 46 56.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47708848 + NM_000251 MSH2 0 . . . 1.89 72.26 25 4.39 No 32 0.96 Yes 0 0 No -23 0.92 Yes 26 71.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59828902 - NM_032043 BRIP1 0 . . . 5.13 65.3 14 7.1 Yes 65 -3.23 No 0 0 No -28 0.29 No 43 52.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33447765 - NM_002878 RAD51D 0 . . . 4.18 81.64 23 4.9 No 43 1.48 Yes 0 0 No -22 0.88 Yes 49 24.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68982417 + NM_133509 RAD51B 0 . . . 1.86 82.74 21 5.2 No 3 0.54 No 0 0 No -20 0.79 Yes 50 58.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1212365 + NM_000455 STK11 0 . . . 1.42 0 44 5.7 Yes 40 -2.11 No 0 0 No -26 0.95 Yes 51 40.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68779906 + NM_004360 CDH1 0 . . . 8.8 86.24 22 4.48 No 64 1.38 Yes 0 0 No -21 0.56 No 48 65.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59817197 - NM_032043 BRIP1 0 . . . 3.31 81.65 19 4.46 No 62 2.06 Yes 0 0 No -18 0.88 Yes 47 78.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69023080 + NM_133509 RAD51B 0 . . . 2.78 68.03 19 8.47 Yes 68 1.42 Yes 0 0 No -32 0.7 Yes 47 89.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68348709 + NM_133509 RAD51B 0 . . . 5.27 0 30 5.74 Yes 38 1.52 Yes 0 0 No -29 0.85 Yes 49 63.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89733573 + NM_000314 PTEN 0 . . . 2.22 68.07 23 4.65 No 68 1 Yes 0 0 No -35 0.56 No 46 74.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75496370 - NM_001040108 MLH3 0 . . . 1.25 74.47 22 6.2 Yes 64 0.58 No 0 0 No -24 0.66 Yes 37 59.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47657394 + NM_000251 MSH2 0 . . . 2.64 74.73 17 5.36 No 22 1.28 Yes 0 0 No -22 0.61 No 36 86.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68824450 + NM_004360 CDH1 0 . . . 0.32 73.46 16 5.2 No 43 -1.29 No 0 0 No -39 0.94 Yes 38 27.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29085371 - NM_001005735 CHEK2 0 . . . 1.33 72.31 24 5.3 No 55 -5.48 No 0 0 No -23 0.76 Yes 51 85.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48030656 + NM_000179 MSH6 0 . . . 0.56 71.93 31 5.91 Yes 24 1.03 Yes 0 0 No -30 0.58 No 47 38.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68364386 + NM_133509 RAD51B 0 . . . 4.39 84.41 40 6.63 Yes 8 1.21 Yes 0 0 No -33 0.45 No 50 95.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89664693 + NM_000314 PTEN 0 . . . 2.36 83.01 11 4.69 No 7 1.22 Yes 0 0 No -17 0.53 No 44 73.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45802320 - NM_001048171 MUTYH 0 . . . 2.03 0 27 5.23 No 68 -4.55 No 0 0 No -26 0.86 Yes 53 55.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84407135 - NM_139076 FAM175A 0 . . . 0.7 64.05 19 5.39 No 62 0.82 Yes 0 0 No -18 0.31 No 41 16.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59916608 - NM_032043 BRIP1 0 . . . 3.67 76.37 22 5.29 No 14 0.41 No 0 0 No -52 0.57 No 38 73.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56783939 + NM_058216 RAD51C 0 . . . 0.4 67.32 37 6.29 Yes 57 0.86 Yes 0 0 No -28 0.65 No 45 29.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215639435 - NM_000465 BARD1 0 . . . 9.14 79.56 51 7.1 Yes 33 0.09 No 0 0 No -32 0.39 No 42 63.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131951626 + NM_005732 RAD50 0 . . . 4.55 79.84 26 4.04 No 62 0.71 No 0 0 No -20 0.54 No 44 49.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47688754 + NM_000251 MSH2 0 . . . 2.7 81.49 18 7 Yes 52 1 Yes 0 0 No -17 0.41 No 20 4.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68784378 + NM_004360 CDH1 0 . . . 0.82 63.24 29 5.92 Yes 3 0.07 No 0 0 No -28 0.85 Yes 44 71.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94191176 - NM_005591 MRE11 0 . . . 4.02 76.14 21 5.56 Yes 37 1.08 Yes 0 0 No -20 0.9 Yes 30 39.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 40990922 + NM_001164269 RAD51 0 . . . 5.81 80.91 34 5.67 Yes 51 0.77 No 21 0.92 Yes -24 0.62 No 55 46.63 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68805539 + NM_133509 RAD51B 0 . . . 3.54 82.46 19 4.58 No 54 1.48 Yes 0 0 No -19 0.69 Yes 46 74.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48034039 + NM_000179 MSH6 0 . . . 2.05 70.06 52 7.62 Yes 57 -4.34 No 0 0 No -38 0.88 Yes 39 34.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68937111 + NM_133509 RAD51B 0 . . . 5.25 71.17 20 5.1 No 53 -1.81 No 0 0 No -19 0.59 No 38 75.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69085527 + NM_133509 RAD51B 0 . . . 0.69 69.63 25 5.17 No 76 0.67 No 0 0 No -25 0.61 No 63 20.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108170726 + NM_000051 ATM 0 . . . 8.34 84.86 37 6.99 Yes 18 1.06 Yes 0 0 No -23 0.63 No 44 74.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37036602 + NM_000249 MLH1 0 . . . 3.44 74.86 12 5.29 No 50 0.59 No 0 0 No -21 0.6 No 52 33.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68401110 + NM_133509 RAD51B 0 . . . 0.04 67.28 13 5.52 No 62 -5.42 No 0 0 No -24 0.76 Yes 52 26.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48023851 + NM_000179 MSH6 0 . . . 0.47 74.47 17 5.82 Yes 58 -5.46 No 0 0 No -20 0.48 No 54 55.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94212139 - NM_005591 MRE11 0 . . . 0.39 74.29 41 6.51 Yes 5 1.06 Yes 0 0 No -27 0.54 No 47 59.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68759542 + NM_133509 RAD51B 0 . . . 4.91 75.32 28 5.38 No 29 -1.93 No 0 0 No -27 0.75 Yes 46 77.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90992339 - NM_002485 NBN 0 . . . 1.71 74.42 29 4.85 No 22 0.71 No 0 0 No -28 0.47 No 36 91.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190675731 + NM_000534 PMS1 0 . . . 1.3 69.96 34 5.95 Yes 71 -6.04 No 0 0 No -29 0.86 Yes 39 87.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215630002 - NM_000465 BARD1 0 . . . 0.58 0 32 6.91 Yes 73 0.6 No 0 0 No -31 0.93 Yes 45 44.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68959689 + NM_133509 RAD51B 0 . . . 3.98 83.48 24 5.92 Yes 48 -3.99 No 0 0 No -21 0.3 No 41 57.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23614255 - NM_024675 PALB2 0 . . . 6.06 75.59 35 6.24 Yes 49 1.03 Yes 0 0 No -34 0.9 Yes 34 22.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68918058 + NM_133509 RAD51B 0 . . . 3.85 75.39 22 5.18 No 3 0.81 Yes 0 0 No -24 0.73 Yes 44 57.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68771178 + NM_004360 CDH1 0 . . . 3.54 78.13 29 5.11 No 0 0.63 No 0 0 No -29 0.81 Yes 24 59.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108194548 + NM_000051 ATM 0 . . . 5.9 83.7 37 6.29 Yes 76 0.51 No 0 0 No -36 0.77 Yes 50 64.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69046629 + NM_133509 RAD51B 0 . . . 3.55 80.87 19 6.83 Yes 16 0.36 No 0 0 No -18 0.6 No 42 76.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68859573 + NM_004360 CDH1 0 . . . 1.15 0 54 7.48 Yes 6 -2.14 No 0 0 No -18 0.4 No 44 64.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90958090 - NM_002485 NBN 0 . . . 4.43 79.84 31 5.74 Yes 36 0.63 No 0 0 No -30 0.63 No 41 85.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190705597 + NM_000534 PMS1 0 . . . 5.2 72.73 16 4.69 No 43 1.57 Yes 0 0 No -30 0.64 No 42 34.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68506802 + NM_133509 RAD51B 0 . . . 4.26 64.52 18 6.08 Yes 21 0.13 No 0 0 No -30 0.66 No 37 74.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48017540 + NM_000179 MSH6 0 . . . 1.48 0 20 5.1 No 13 0.93 Yes 0 0 No -50 0.81 Yes 45 93.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90967395 - NM_002485 NBN 0 . . . 5.74 86.64 29 8.15 Yes 13 0.55 No 0 0 No -28 0.84 Yes 45 92.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190661667 + NM_000534 PMS1 0 . . . 3.17 83.93 29 3.76 No -2 1.06 Yes 0 0 No -25 0.71 Yes 40 43.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47732190 + NM_000251 MSH2 0 . . . 5.42 79.28 22 5.65 Yes 20 0.73 No 0 0 No -28 0.38 No 45 71.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59797463 - NM_032043 BRIP1 0 . . . 3.12 72.24 38 5.69 Yes 46 1.39 Yes 0 0 No -37 0.35 No 54 77.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89652281 + NM_000314 PTEN 0 . . . 1.65 0 10 3.87 No 34 -1.14 No 0 0 No -36 0.59 No 50 71.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68861052 + NM_133509 RAD51B 0 . . . 0.81 69.37 23 4.69 No 69 0.54 No 0 0 No -22 0.67 Yes 50 54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68669480 + NM_133509 RAD51B 0 . . . 3.45 85.02 26 4.23 No 3 1.16 Yes 0 0 No -25 0.66 No 44 59.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190737130 + NM_000534 PMS1 0 . . . 3.02 68.51 26 4.99 No 20 0.02 No 0 0 No -25 0.88 Yes 38 75.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89634224 + NM_000314 PTEN 0 . . . 10.49 92 16 5.71 Yes 15 1.18 Yes 0 0 No -26 0.55 No 43 80.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215643568 - NM_000465 BARD1 0 . . . 2.08 70.3 17 5.69 Yes -4 1.18 Yes 0 0 No -32 0.76 Yes 37 95.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68909202 + NM_133509 RAD51B 0 . . . 5.47 78.18 51 8 Yes 13 -1.08 No 0 0 No -29 0.7 Yes 13 51.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59791290 - NM_032043 BRIP1 0 . . . 2.3 68.56 22 4.9 No 28 1.17 Yes 0 0 No -21 0.89 Yes 47 54.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68844758 + NM_133509 RAD51B 0 . . . 1.43 0 30 5.26 No 40 -3.03 No 0 0 No -23 0.87 Yes 45 27.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68817411 + NM_004360 CDH1 0 . . . 2.12 81.07 13 4.74 No 6 0.72 No 0 0 No -45 0.48 No 52 56.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1227911 + NM_000455 STK11 0 . . . 10.42 87.8 24 7.41 Yes 31 -1.72 No 0 0 No -23 0.91 Yes 38 64.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69019153 + NM_133509 RAD51B 0 . . . 0.15 57.61 23 6.44 Yes 51 1.06 Yes 0 0 No -28 0.53 No 38 76.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21979715 - NM_000077 CDKN2A 0 . . . 0.33 74.83 28 6.24 Yes 11 1.06 Yes 0 0 No -30 0.41 No 43 78.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89717888 + NM_000314 PTEN 0 . . . 2.87 0 34 8.43 Yes 12 0.42 No 0 0 No -33 0.57 No 39 48.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68860774 + NM_133509 RAD51B 0 . . . 2.86 74.88 32 4.08 No 28 0.22 No 0 0 No -31 0.89 Yes 47 34.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131942972 + NM_005732 RAD50 0 . . . 8.66 90.28 32 5.04 No 66 -3.27 No 0 0 No -31 0.71 Yes 46 69.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190648602 + NM_000534 PMS1 0 . . . 3.55 78.2 17 6.08 Yes 64 1.08 Yes 0 0 No -16 0.77 Yes 47 40.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7571430 - NM_000546 TP53 0 . . . 5.17 81.25 32 5.57 Yes NA NA NA 0 0 No -44 0.3 No 16 43.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131904337 + NM_005732 RAD50 0 . . . 4.8 81.74 43 6.22 Yes 9 0.22 No 0 0 No -26 0.42 No 49 67.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131981556 + NM_005732 RAD50 0 . . . 4.21 70.04 19 4.97 No 69 -5.99 No 0 0 No -18 0.76 Yes 43 80.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56810106 + NM_058216 RAD51C 0 . . . 2.87 77.04 12 4.24 No 3 0.82 Yes 0 0 No -27 0.82 Yes 43 82.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68797528 + NM_133509 RAD51B 0 . . . 5.04 75.55 23 5.39 No 12 0.47 No 0 0 No -22 0.79 Yes 46 95.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69038854 + NM_133509 RAD51B 0 . . . 0.74 69.25 20 4.38 No 7 1.22 Yes 0 0 No -19 0.82 Yes 41 62.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68307698 + NM_133509 RAD51B 0 . . . 4.61 84.77 27 4.08 No 2 1.05 Yes 0 0 No -26 0.96 Yes 56 56.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90953577 - NM_002485 NBN 0 . . . 5.69 79.5 22 4.79 No 0 0.39 No 0 0 No -21 0.92 Yes 48 69.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23653850 - NM_024675 PALB2 0 . . . 2.39 76.63 24 5.85 Yes 67 -4.93 No 0 0 No -26 0.49 No 50 65.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59922324 - NM_032043 BRIP1 0 . . . 0.26 59.91 74 7.76 Yes 46 1.1 Yes 0 0 No -38 0.75 Yes 12 35.23 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215661736 - NM_000465 BARD1 0 . . . 6.78 80.64 43 4.95 No 53 0.07 No 0 0 No -27 0.55 No 45 42.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68775725 + NM_133509 RAD51B 0 . . . 4.34 70.67 15 4.52 No 65 -2.14 No 0 0 No -47 0.3 No 43 36.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68389593 + NM_133509 RAD51B 0 . . . 2.24 80.12 24 4.95 No 7 1.16 Yes 0 0 No -24 0.44 No 51 84.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68993495 + NM_133509 RAD51B 0 . . . 0.69 84.95 36 4.8 No -4 1 Yes 0 0 No -25 0.3 No 48 69.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47661551 + NM_000251 MSH2 0 . . . 2.56 78.33 33 6 Yes 18 -2.15 No 0 0 No -32 0.63 No 51 22.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215602264 - NM_000465 BARD1 0 . . . 3.86 73.4 12 3.87 No 58 0.35 No 0 0 No -29 0.94 Yes 46 58.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89637850 + NM_000314 PTEN 0 . . . 2.19 84.41 23 4.35 No 8 0.53 No 0 0 No -22 0.84 Yes 43 39.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68732084 + NM_133509 RAD51B 0 . . . 1.75 70.88 35 5.86 Yes 69 0.34 No 0 0 No -31 0.31 No 45 87.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32963953 + NM_000059 BRCA2 0 . . . 2.39 85.79 23 3.47 No 15 0.71 No 0 0 No -22 0.78 Yes 45 70.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41255931 - NM_007294 BRCA1 0 . . . 1.28 77.24 16 4.53 No 33 1.16 Yes 0 0 No -16 0.47 No 19 47.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69109593 + NM_133509 RAD51B 0 . . . 3.68 68.97 48 6.07 Yes 8 0.85 Yes 0 0 No -39 0.62 No 36 74.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68975648 + NM_133509 RAD51B 0 . . . 6.23 77.16 13 4.8 No 10 1.61 Yes 0 0 No -18 0.39 No 48 91.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68689999 + NM_133509 RAD51B 0 . . . 4.68 74.5 27 6.51 Yes 0 0.6 No 0 0 No -26 0.67 Yes 44 67.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68363070 + NM_133509 RAD51B 0 . . . 1.86 55.96 21 5.01 No 69 1.62 Yes 0 0 No -20 0.68 Yes 33 83.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68917956 + NM_133509 RAD51B 0 . . . 1.05 72.86 16 5.32 No 45 -4.13 No 0 0 No -24 0.83 Yes 50 77.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68553931 + NM_133509 RAD51B 0 . . . 2.96 76.93 42 6.66 Yes -4 0.84 Yes 0 0 No -23 0.49 No 25 79.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40985555 + NM_001164269 RAD51 0 . . . 1.43 66.46 19 4.56 No 16 1.5 Yes 0 0 No -31 0.8 Yes 42 84.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41015170 + NM_001164269 RAD51 0 . . . 1.91 61.59 18 4.84 No 71 -5.59 No 0 0 No -33 0.26 No 44 60.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68361545 + NM_133509 RAD51B 0 . . . 5.61 0 18 5.39 No 49 1.01 Yes 0 0 No -22 0.54 No 42 48.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89668756 + NM_000314 PTEN 0 . . . 7.7 78.01 35 5.92 Yes 20 0.68 No 0 0 No -28 0.7 Yes 49 63.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68309249 + NM_133509 RAD51B 0 . . . 1.87 76.28 34 6.32 Yes 49 1.87 Yes 0 0 No -33 0.83 Yes 48 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68605377 + NM_133509 RAD51B 0 . . . 5.56 81.82 17 4.8 No 60 0.89 Yes 0 0 No -40 0.58 No 47 70.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94175929 - NM_005591 MRE11 0 . . . 0.9 0 28 4.94 No -2 0.94 Yes 0 0 No -42 0.44 No 42 32.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90994292 - NM_002485 NBN 0 . . . 0.66 76.6 25 5.96 Yes 8 0.06 No 0 0 No -24 0.78 Yes 50 28.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89689589 + NM_000314 PTEN 0 . . . 3.66 0 26 6.12 Yes 32 0.03 No 0 0 No -34 0.42 No 55 83.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68870161 + NM_004360 CDH1 0 . . . 0.64 68.82 28 5.66 Yes 41 -1.29 No 0 0 No -25 0.61 No 17 75.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190717447 + NM_000534 PMS1 0 . . . 2.8 83.49 27 5.2 No 24 0.92 Yes 0 0 No -45 0.77 Yes 34 53.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94181386 - NM_005591 MRE11 0 . . . 6.02 72.35 17 5.29 No 22 1.35 Yes 0 0 No -21 0.74 Yes 36 92.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68696858 + NM_133509 RAD51B 0 . . . 1.97 70.49 26 5.84 Yes 71 -5.33 No 0 0 No -30 0.76 Yes 51 57.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108190636 + NM_000051 ATM 0 . . . 7.09 74.9 29 5.89 Yes 14 0.5 No 0 0 No -24 0.61 No 49 46.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56798212 + NM_058216 RAD51C 0 . . . 0.88 0 33 6.54 Yes 60 0.11 No 0 0 No -32 0.59 No 42 85.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68737473 + NM_133509 RAD51B 0 . . . 8.71 84.2 20 4.57 No 31 0.8 Yes 0 0 No -23 0.8 Yes 35 94.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68370142 + NM_133509 RAD51B 0 . . . 0.8 67.3 35 6.3 Yes 1 1.43 Yes 0 0 No -34 0.89 Yes 43 67.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68944809 + NM_133509 RAD51B 0 . . . 4.05 81.81 21 4.66 No 4 0.03 No 0 0 No -20 0.62 No 50 50.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131931787 + NM_005732 RAD50 0 . . . 0.37 66.9 23 5.71 Yes 67 0.63 No 0 0 No -22 0.36 No 46 93.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90969081 - NM_002485 NBN 0 . . . 1.47 73.2 17 4.8 No 28 0.28 No 0 0 No -20 0.66 No 43 90.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68918517 + NM_133509 RAD51B 0 . . . 1.68 76.57 9 3.87 No 65 0.81 Yes 0 0 No -30 0.54 No 50 27.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68849117 + NM_133509 RAD51B 0 . . . 3.28 77.93 33 6.05 Yes 14 0.93 Yes 0 0 No -32 0.78 Yes 44 95.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47676710 + NM_000251 MSH2 0 . . . 6.24 82.31 29 5.39 No 58 1.05 Yes 0 0 No -61 0.38 No 55 56.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75508089 - NM_001040108 MLH3 0 . . . 2.13 85.02 17 4.8 No 70 0.05 No 0 0 No -19 0.28 No 50 57.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56773308 + NM_058216 RAD51C 0 . . . 3.13 72.26 24 3.59 No -2 0.28 No 0 0 No -23 0.81 Yes 43 54.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108212015 + NM_000051 ATM 0 . . . 5.81 92.51 25 5.39 No 7 1 Yes 0 0 No -22 0.79 Yes 42 85.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59919085 - NM_032043 BRIP1 0 . . . 6.12 74.65 25 5.49 No 59 -3.92 No 0 0 No -24 0.92 Yes 50 46.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89624091 + NM_000314 PTEN 0 . . . 2.07 71.2 21 4.6 No 59 -2.47 No 0 0 No -20 0.79 Yes 46 39.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47653162 + NM_000251 MSH2 0 . . . 7.28 85.02 21 8.73 Yes 9 1.55 Yes 0 0 No -27 0.41 No 49 91.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69056504 + NM_133509 RAD51B 0 . . . 8.29 83.35 20 7.14 Yes 75 0.25 No 0 0 No -19 0.72 Yes 40 88.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59828338 - NM_032043 BRIP1 0 . . . 3.52 72.94 21 5.2 No 64 1.14 Yes 0 0 No -20 0.56 No 46 51.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94194596 - NM_005591 MRE11 0 . . . 0.45 70.62 17 5.6 Yes -2 0.56 No 0 0 No -27 0.52 No 23 39.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68862994 + NM_004360 CDH1 0 . . . 3.69 56.19 37 5.66 Yes 65 -3.4 No 0 0 No -36 0.47 No 39 82.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59865271 - NM_032043 BRIP1 0 . . . 0.09 74.68 14 5.47 No 4 0.41 No 0 0 No -23 0.62 No 54 85.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47754818 + NM_000251 MSH2 0 . . . 2.39 81.86 37 6.16 Yes 61 1.39 Yes 0 0 No -36 0.49 No 50 63.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21985902 - NM_000077 CDKN2A 0 . . . 2.45 0 16 4.69 No 20 0.43 No 0 0 No -19 0.38 No 45 62.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215672827 - NM_000465 BARD1 0 . . . 2.22 56.96 21 4.8 No 74 0.93 Yes 0 0 No -20 0.75 Yes 28 35.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7565125 - NM_000546 TP53 0 . . . 2.39 76.63 28 6.15 Yes 57 0.12 No 0 0 No -57 0.41 No 43 60.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68774706 + NM_004360 CDH1 0 . . . 2.01 0 35 5.56 Yes 60 1.15 Yes 0 0 No -34 0.78 Yes 40 92.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215596761 - NM_000465 BARD1 0 . . . 6.06 71.32 33 5.5 No -1 1.25 Yes 0 0 No -32 0.87 Yes 40 68.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108221918 + NM_000051 ATM 0 . . . 0.4 55.03 29 5.38 No 13 0.43 No 0 0 No -28 0.78 Yes 36 66.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215601010 - NM_000465 BARD1 0 . . . 5.35 76.75 20 5.1 No 16 1.51 Yes 0 0 No -23 0.68 Yes 42 90.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108186086 + NM_000051 ATM 0 . . . 2.53 72.85 38 4.53 No 46 0.42 No 0 0 No -26 0.63 No 47 62.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84406378 - NM_139076 FAM175A 0 . . . 5.4 72.26 13 5.09 No NA NA NA 19 0.46 Yes -20 0.4 No 33 26.57 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr17 59915762 - NM_032043 BRIP1 0 . . . 0.98 70.57 18 5.53 No 52 0.9 Yes 0 0 No -17 0.52 No 48 83.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37084943 + NM_000249 MLH1 0 . . . 0.42 74.73 24 5.37 No 37 1.04 Yes 0 0 No -23 0.51 No 21 52.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47693833 + NM_000251 MSH2 0 . . . 0.73 66.85 21 5.74 Yes 28 -3.36 No 0 0 No -20 0.68 Yes 49 39.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29136264 - NM_001005735 CHEK2 0 . . . 2.65 73.06 15 3.97 No 19 0.73 No 0 0 No -37 0.74 Yes 44 84.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68345246 + NM_133509 RAD51B 0 . . . 8.07 82.85 16 5.57 Yes 56 0.46 No 0 0 No -24 0.79 Yes 28 61.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68373789 + NM_133509 RAD51B 0 . . . 3.52 70.85 33 6.35 Yes 13 0.83 Yes 0 0 No -32 0.54 No 45 75.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90946294 - NM_002485 NBN 0 . . . 4.99 77.39 38 4.37 No 25 0.64 No 0 0 No -23 0.87 Yes 33 85.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41209953 - NM_007294 BRCA1 0 . . . 5.36 79.55 33 5.56 Yes 16 0.89 Yes 0 0 No -52 0.26 No 42 96.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68467615 + NM_133509 RAD51B 0 . . . 1.36 0 24 6.16 Yes 45 0.41 No 0 0 No -23 0.72 Yes 28 53.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68807557 + NM_133509 RAD51B 0 . . . 0.74 64.67 29 5.74 Yes 23 1.48 Yes 0 0 No -24 0.41 No 52 37.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68644099 + NM_133509 RAD51B 0 . . . 10.59 82.58 26 5.66 Yes 28 -0.68 No 0 0 No -25 0.95 Yes 42 57.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997352 + NM_001164269 RAD51 0 . . . 2.52 76.51 29 6.47 Yes 46 1 Yes 0 0 No -28 0.75 Yes 49 64.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47750787 + NM_000251 MSH2 0 . . . 2.64 0 20 5.67 Yes 2 1 Yes 0 0 No -19 0.65 No 51 88.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23645691 - NM_024675 PALB2 0 . . . 0.07 73.92 34 6.3 Yes 71 0.91 Yes 0 0 No -25 0.5 No 48 39.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56775588 + NM_058216 RAD51C 0 . . . 3.08 84 21 4.86 No 2 1.5 Yes 0 0 No -20 0.58 No 20 95.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68394819 + NM_133509 RAD51B 0 . . . 3.57 71.31 25 5.52 No 17 0.93 Yes 0 0 No -24 0.77 Yes 41 87.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108118260 + NM_000051 ATM 0 . . . 4.01 80.03 26 5.36 No 40 -3.58 No 0 0 No -25 0.94 Yes 46 96.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94202844 - NM_005591 MRE11 0 . . . 3.57 76.23 21 4.62 No 66 -3.62 No 0 0 No -24 0.81 Yes 44 68.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68704286 + NM_133509 RAD51B 0 . . . 2.19 72.36 44 6.85 Yes 53 1.1 Yes 0 0 No -20 0.67 Yes 44 30.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6029680 - NM_000535 PMS2 0 . . . 0.9 0 18 4.16 No 64 -4.27 No 0 0 No -22 0.45 No 43 63.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68843266 + NM_004360 CDH1 0 . . . 1.29 71.33 17 4.95 No 46 0.72 No 0 0 No -20 0.6 No 48 78.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68632560 + NM_133509 RAD51B 0 . . . 5.31 66.76 25 5.04 No 36 0.66 No 0 0 No -14 0.47 No 45 67.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47701405 + NM_000251 MSH2 0 . . . 1.48 71.47 27 5.2 No 61 1.76 Yes 0 0 No -57 0.76 Yes 45 82.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68300817 + NM_133509 RAD51B 0 . . . 4.28 88.29 20 6.27 Yes 47 -2.14 No 0 0 No -19 0.37 No 47 42.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68775454 + NM_004360 CDH1 0 . . . 1.42 0 33 6.09 Yes 48 0.48 No 0 0 No -32 0.68 Yes 46 66.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68492289 + NM_133509 RAD51B 0 . . . 4.1 83.12 24 5.44 No 40 0 No 0 0 No -27 0.65 No 53 45.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68918697 + NM_133509 RAD51B 0 . . . 4.02 84 17 4.33 No 52 0.61 No 0 0 No -24 0.69 Yes 45 92.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47685882 + NM_000251 MSH2 0 . . . 1.12 67.96 68 9.2 Yes 33 1.17 Yes 0 0 No -28 0.65 No 25 47.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68867954 + NM_004360 CDH1 0 . . . 6.14 91.68 28 5.78 Yes 9 1 Yes 0 0 No -27 0.73 Yes 49 95.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68429430 + NM_133509 RAD51B 0 . . . 1.31 69.24 15 4.29 No 53 -4.2 No 0 0 No -19 0.54 No 44 70.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32888069 + NM_000059 BRCA2 0 . . . 3.62 68.01 31 7.15 Yes 46 0.35 No 0 0 No -30 0.88 Yes 47 53.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131968659 + NM_005732 RAD50 0 . . . 6.69 85.56 17 4.8 No 11 1.03 Yes 0 0 No -40 0.36 No 47 58.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190647334 + NM_000534 PMS1 0 . . . 10.05 89.16 63 6.58 Yes 3 1.06 Yes 0 0 No -30 0.43 No 48 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90956508 - NM_002485 NBN 0 . . . 4.84 76.33 20 4.47 No 8 0.16 No 0 0 No -19 0.89 Yes 39 76.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215655722 - NM_000465 BARD1 0 . . . 3.88 81.39 23 6.08 Yes 6 1.13 Yes 0 0 No -22 0.91 Yes 47 90.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29095034 - NM_001005735 CHEK2 0 . . . 2.42 0 37 4.48 No 63 -4.17 No 0 0 No -25 0.65 No 48 57.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215619965 - NM_000465 BARD1 0 . . . 5.87 77.06 27 5.39 No 48 1.08 Yes 0 0 No -26 0.81 Yes 44 89.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68778968 + NM_004360 CDH1 0 . . . 5.6 77.82 22 5.71 Yes 66 -1.7 No 0 0 No -21 0.68 Yes 37 60.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94223650 - NM_005591 MRE11 0 . . . 6.13 76.71 13 5.66 Yes 60 0.64 No 0 0 No -54 0.44 No 45 72.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59907340 - NM_032043 BRIP1 0 . . . 0.07 69.62 22 7 Yes 58 -3.88 No 0 0 No -22 0.59 No 48 70.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41251169 - NM_007294 BRCA1 0 . . . 0.09 61.88 31 5.48 No 42 -3.6 No 0 0 No -23 0.84 Yes 47 71.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190684924 + NM_000534 PMS1 0 . . . 3.39 66.43 21 6.02 Yes 0 0.14 No 0 0 No -25 0.79 Yes 46 64.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68316117 + NM_133509 RAD51B 0 . . . 0.78 84.22 27 4.01 No 33 1.18 Yes 0 0 No -26 0.95 Yes 51 35.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89660231 + NM_000314 PTEN 0 . . . 4.1 83.49 25 5.82 Yes 46 -2.33 No 0 0 No -24 0.65 No 35 73.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21986147 - NM_000077 CDKN2A 0 . . . 5.71 81.22 30 6.32 Yes 23 0.48 No 0 0 No -27 0.61 No 42 56.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68629979 + NM_133509 RAD51B 0 . . . 7.7 84.94 24 4.9 No 9 0.22 No 0 0 No -23 0.69 Yes 49 93.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68723865 + NM_133509 RAD51B 0 . . . 3.33 66.05 20 3.82 No 16 0.36 No 0 0 No -23 0.67 Yes 51 61.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68382515 + NM_133509 RAD51B 0 . . . 6.05 74.65 49 7.27 Yes 14 0.06 No 0 0 No -29 0.7 Yes 44 48.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190710255 + NM_000534 PMS1 0 . . . 1.13 64.39 16 4.35 No 3 0.33 No 0 0 No -15 0.56 No 48 52.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32931720 + NM_000059 BRCA2 0 . . . 4.17 66.98 24 5.2 No -2 0.44 No 0 0 No -23 0.46 No 49 58.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32937815 + NM_000059 BRCA2 0 . . . 0 0 29 5.34 No 37 0.67 No 0 0 No -28 0.37 No 50 65.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68312712 + NM_133509 RAD51B 0 . . . 1.65 0 18 4.69 No 59 0.81 Yes 0 0 No -17 0.66 No 41 83.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108120304 + NM_000051 ATM 0 . . . 3.47 64.31 33 5.74 Yes 67 0.64 No 0 0 No -26 0.63 No 46 78.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94192320 - NM_005591 MRE11 0 . . . 0.58 0 25 3.9 No 39 0.88 Yes 0 0 No -24 0.59 No 19 43.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69104638 + NM_133509 RAD51B 0 . . . 5.95 88.02 19 5.44 No 2 1.47 Yes 0 0 No -27 0.65 No 41 54.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33435371 - NM_002878 RAD51D 0 . . . 3.2 82.13 28 4.05 No 75 0.82 Yes 0 0 No -27 0.79 Yes 52 68.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23615117 - NM_024675 PALB2 0 . . . 0.41 65.32 27 5.29 No 72 -6.1 No 0 0 No -26 0.84 Yes 55 35.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68719771 + NM_133509 RAD51B 0 . . . 3.82 72.85 33 6.63 Yes 75 -4.95 No 0 0 No -37 0.27 No 53 41.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68350534 + NM_133509 RAD51B 0 . . . 2.46 78.28 14 5.37 No 41 0.16 No 0 0 No -22 0.64 No 54 73.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59843707 - NM_032043 BRIP1 0 . . . 2.51 0 15 5.19 No 58 -5.39 No 0 0 No -25 0.51 No 45 75.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29081990 - NM_001005735 CHEK2 0 . . . 2.11 68.84 34 5.92 Yes 71 1.77 Yes 0 0 No -33 0.8 Yes 48 71.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32953051 + NM_000059 BRCA2 0 . . . 2.19 63.75 23 5.39 No 72 -3.5 No 0 0 No -22 0.91 Yes 46 61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75479789 - NM_001040108 MLH3 0 . . . 2.45 73.68 24 5.29 No 31 0.15 No 0 0 No -23 0.66 Yes 44 91.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68852886 + NM_004360 CDH1 0 . . . 6.01 78.92 26 5.2 No 42 1.13 Yes 0 0 No -25 0.74 Yes 42 49.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84388450 - NM_139076 FAM175A 0 . . . 1.98 67.06 29 6.98 Yes 4 0.18 No 0 0 No -28 0.89 Yes 32 65.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41199485 - NM_007294 BRCA1 0 . . . 1.64 68.68 16 5.91 Yes 23 1.06 Yes 0 0 No -19 0.36 No 35 58.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68440656 + NM_133509 RAD51B 0 . . . 4.6 73.15 16 4.69 No 44 1.96 Yes 0 0 No -45 0.55 No 39 68.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37044961 + NM_000249 MLH1 0 . . . 1.26 84.22 23 5.83 Yes 75 1.48 Yes 0 0 No -22 0.81 Yes 50 57.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32950019 + NM_000059 BRCA2 0 . . . 0.81 63.47 26 4.75 No 72 0.78 Yes 0 0 No -55 0.43 No 61 35.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32897498 + NM_000059 BRCA2 0 . . . 2.49 73.32 22 5.57 Yes 31 1.19 Yes 0 0 No -21 0.56 No 27 74.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105179563 + NM_021930 RINT1 0 . . . 4.79 74.83 29 7 Yes 66 2.08 Yes 0 0 No -28 0.95 Yes 41 71.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89657608 + NM_000314 PTEN 0 . . . 5.03 76.85 22 5.65 Yes 38 1.06 Yes 0 0 No -21 0.81 Yes 44 71.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29090782 - NM_001005735 CHEK2 0 . . . 6.15 69.24 28 5.42 No 56 0.76 No 0 0 No -44 0.71 Yes 46 61.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215636570 - NM_000465 BARD1 0 . . . 5.68 86.29 35 5.98 Yes 16 0.04 No 0 0 No -31 0.49 No 45 74.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152373987 - NM_005431 XRCC2 0 . . . 7.03 94.05 22 5.29 No 5 0.27 No 0 0 No -21 0.63 No 42 69.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29110108 - NM_001005735 CHEK2 0 . . . 5.89 74.49 30 7.14 Yes 1 0.64 No 0 0 No -29 0.59 No 48 46.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68816143 + NM_004360 CDH1 0 . . . 1.28 80.7 22 4.69 No 31 -1.25 No 0 0 No -21 0.68 Yes 51 20.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105175778 + NM_021930 RINT1 0 . . . 3.06 66.46 18 5.22 No 59 1.47 Yes 0 0 No -17 0.61 No 42 86.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68825426 + NM_004360 CDH1 0 . . . 8.43 86 26 5.62 Yes 15 0.98 Yes 0 0 No -25 0.62 No 48 70.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68332276 + NM_133509 RAD51B 0 . . . 4.74 84.41 46 6.13 Yes 72 0.77 Yes 0 0 No -35 0.71 Yes 44 66.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68754410 + NM_133509 RAD51B 0 . . . 1.77 65.48 20 4.56 No 66 0.7 No 0 0 No -19 0.53 No 40 50.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32973942 + NM_000059 BRCA2 0 . . . 2.21 84.41 64 6.37 Yes 20 0.78 Yes 0 0 No -25 0.71 Yes 38 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56773399 + NM_058216 RAD51C 0 . . . 2.54 76.63 28 5.8 Yes 58 0.15 No 0 0 No -27 0.81 Yes 53 53.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131913422 + NM_005732 RAD50 0 . . . 0.68 0 16 4.69 No 19 0.88 Yes 0 0 No -37 0.86 Yes 28 78.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7567202 - NM_000546 TP53 0 . . . 2.86 77.35 11 4.12 No 4 0.41 No 0 0 No -28 0.86 Yes 54 82.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190672150 + NM_000534 PMS1 0 . . . 5.49 78.55 13 4.83 No 55 0.49 No 0 0 No -24 0.36 No 44 71.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190657340 + NM_000534 PMS1 0 . . . 2.4 74.1 14 6.85 Yes 6 0.76 No 0 0 No -23 0.37 No 52 94.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131921316 + NM_005732 RAD50 0 . . . 1.91 82.86 34 6.19 Yes 28 0.83 Yes 0 0 No -33 0.54 No 30 70.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131892107 + NM_005732 RAD50 0 . . . 0.74 0 23 5.07 No 50 1.26 Yes 0 0 No -22 0.68 Yes 44 44.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68371439 + NM_133509 RAD51B 0 . . . 1.92 81.23 27 7 Yes 41 1.14 Yes 0 0 No -26 0.86 Yes 46 64.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68920782 + NM_133509 RAD51B 0 . . . 0.46 67.03 61 8.69 Yes 76 -5.98 No 0 0 No -48 0.63 No 52 37.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68465664 + NM_133509 RAD51B 0 . . . 7.35 79.02 31 6.08 Yes 5 1.2 Yes 0 0 No -30 0.8 Yes 53 68.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105194047 + NM_021930 RINT1 0 . . . 1.41 63.29 20 8 Yes 56 1.2 Yes 0 0 No -22 0.59 No 43 43.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68612755 + NM_133509 RAD51B 0 . . . 0.87 75.34 21 7.07 Yes 71 -4.75 No 0 0 No -20 0.51 No 50 42.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190666015 + NM_000534 PMS1 0 . . . 4.97 66.21 50 7.19 Yes 30 1.29 Yes 0 0 No -31 0.92 Yes 38 85.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68464203 + NM_133509 RAD51B 0 . . . 4.92 70.25 15 4.58 No 44 0.9 Yes 0 0 No -32 0.42 No 45 83.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59880870 - NM_032043 BRIP1 0 . . . 3.33 77.93 14 4.43 No 46 1.55 Yes 0 0 No -27 0.33 No 12 81.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152368881 - NM_005431 XRCC2 0 . . . 3.92 70.85 23 5.76 Yes 9 1.26 Yes 0 0 No -22 0.7 Yes 49 80.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47652620 + NM_000251 MSH2 0 . . . 3.32 66.23 17 5.48 No 31 -4.24 No 0 0 No -23 0.8 Yes 40 88.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68430139 + NM_133509 RAD51B 0 . . . 7.46 83.74 38 5.29 No 49 0.96 Yes 0 0 No -27 0.83 Yes 42 75.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105174180 + NM_021930 RINT1 0 . . . 2.18 74.96 12 4.9 No 67 -5.64 No 0 0 No -18 0.68 Yes 41 65.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6016063 - NM_000535 PMS2 0 . . . 6.76 91.13 24 4.77 No 70 -3.86 No 0 0 No -29 0.59 No 49 61.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89707196 + NM_000314 PTEN 0 . . . 0.67 61.47 17 5.35 No 51 -1.78 No 0 0 No -23 0.29 No 16 59.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215599401 - NM_000465 BARD1 0 . . . 6.4 74.22 15 3.7 No -4 0.49 No 0 0 No -19 0.61 No 41 80.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52441665 - NM_004656 BAP1 0 . . . 0.98 67.46 23 5 No 29 0.33 No 0 0 No -23 0.52 No 57 49.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47638068 + NM_000251 MSH2 0 . . . 0.6 67.62 21 6.56 Yes 52 0.05 No 0 0 No -20 0.81 Yes 48 75.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32892680 + NM_000059 BRCA2 0 . . . 1.89 68.36 24 5.05 No 16 1.04 Yes 0 0 No -23 0.96 Yes 42 82.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40986114 + NM_001164269 RAD51 0 . . . 4.37 78.17 29 4.25 No -3 1.55 Yes 0 0 No -29 0.4 No 42 65.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68744968 + NM_133509 RAD51B 0 . . . 8.11 92.26 29 5.29 No 35 0.45 No 0 0 No -28 0.82 Yes 50 70.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47660946 + NM_000251 MSH2 0 . . . 5.66 85.17 31 6.15 Yes -3 0.45 No 0 0 No -30 0.49 No 50 40.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32897029 + NM_000059 BRCA2 0 . . . 6.44 84.78 34 4.23 No 64 -4.36 No 0 0 No -26 0.49 No 43 39.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90986912 - NM_002485 NBN 0 . . . 2.01 0 15 4.27 No 60 1.08 Yes 0 0 No -20 0.45 No 33 52.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215590358 - NM_000465 BARD1 0 . . . 1.71 79.68 30 6.86 Yes 62 0.18 No 0 0 No -29 0.67 Yes 50 67.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29138317 - NM_001005735 CHEK2 0 . . . 3.51 73.79 28 5.06 No NA NA NA 0 0 No -20 0.55 No 22 69.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131968671 + NM_005732 RAD50 0 . . . 6.51 0 20 4.43 No 23 1.2 Yes 0 0 No -42 0.45 No 39 55.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68861597 + NM_004360 CDH1 0 . . . 2.13 74.12 33 6.08 Yes 31 1.53 Yes 0 0 No -32 0.39 No 44 89.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7586210 - NM_000546 TP53 0 . . . 6.26 74.68 15 3.47 No 17 1.47 Yes 0 0 No -31 0.78 Yes 41 94.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215655129 - NM_000465 BARD1 0 . . . 0.95 0 18 4.14 No 38 1.1 Yes 0 0 No -20 0.67 Yes 20 95.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29121204 - NM_001005735 CHEK2 0 . . . 4.24 71.74 30 5.22 No 56 -4.86 No 0 0 No -29 0.7 Yes 50 78.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89669416 + NM_000314 PTEN 0 . . . 2.7 0 37 5.97 Yes 9 -1.56 No 0 0 No -23 0.73 Yes 23 49.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68922469 + NM_133509 RAD51B 0 . . . 3.26 80.79 28 5.29 No 41 0.43 No 0 0 No -27 0.88 Yes 37 61.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131910303 + NM_005732 RAD50 0 . . . 6.06 81.69 13 5.29 No 46 1.09 Yes 0 0 No -25 0.18 No 47 83.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32923838 + NM_000059 BRCA2 0 . . . 2.12 76.44 13 4.36 No 60 1.01 Yes 0 0 No -49 0.85 Yes 53 67.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59804676 - NM_032043 BRIP1 0 . . . 4.87 0 16 4.31 No 41 0.93 Yes 0 0 No -24 0.88 Yes 17 84.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68372308 + NM_133509 RAD51B 0 . . . 7.33 85.68 23 3.8 No -1 1.85 Yes 0 0 No -22 0.7 Yes 39 76.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131956035 + NM_005732 RAD50 0 . . . 4.27 85.17 23 5.38 No 33 1.24 Yes 0 0 No -22 0.85 Yes 47 93.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108169912 + NM_000051 ATM 0 . . . 6.58 77.59 47 7.27 Yes 14 0.77 Yes 0 0 No -34 0.55 No 44 86.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190672724 + NM_000534 PMS1 0 . . . 0.66 62.37 11 4.12 No 51 0.03 No 0 0 No -43 0.52 No 45 54.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68669949 + NM_133509 RAD51B 0 . . . 2.58 70.18 27 6.65 Yes 20 0.68 No 0 0 No -26 0.93 Yes 43 91.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84401447 - NM_139076 FAM175A 0 . . . 1.24 80.17 33 5.62 Yes 10 1.13 Yes 0 0 No -32 0.81 Yes 48 92.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68377832 + NM_133509 RAD51B 0 . . . 0.78 69.16 22 4.67 No 47 0.79 Yes 0 0 No -58 0.34 No 55 27.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68514419 + NM_133509 RAD51B 0 . . . 7.44 88.04 20 4.63 No 5 0.71 No 0 0 No -19 0.83 Yes 46 31.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90993254 - NM_002485 NBN 0 . . . 3.92 76.62 16 5.1 No 36 0.33 No 0 0 No -21 0.75 Yes 44 67.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59789712 - NM_032043 BRIP1 0 . . . 5.33 72.77 33 5.69 Yes 47 0.63 No 0 0 No -31 0.37 No 43 70.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94173665 - NM_005591 MRE11 0 . . . 1.14 0 55 7.42 Yes 61 1.24 Yes 0 0 No -17 0.59 No 42 76.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68696383 + NM_133509 RAD51B 0 . . . 0.31 0 13 5.33 No 64 0.83 Yes 0 0 No -27 0.78 Yes 45 90.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68866845 + NM_004360 CDH1 0 . . . 0.24 60.29 17 5.33 No 34 0.14 No 0 0 No -24 0.56 No 17 60.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59852303 - NM_032043 BRIP1 0 . . . 7.19 91.2 43 7.46 Yes 9 1.35 Yes 0 0 No -35 0.37 No 42 77.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68459078 + NM_133509 RAD51B 0 . . . 1.49 66.03 26 4.48 No 1 0.08 No 0 0 No -31 0.36 No 41 80.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68667489 + NM_133509 RAD51B 0 . . . 1.51 80.65 15 4.58 No 33 1.04 Yes 0 0 No -26 0.54 No 50 39.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68546205 + NM_133509 RAD51B 0 . . . 0.08 68.79 14 4.47 No -1 0.3 No 0 0 No -40 0.68 Yes 34 67.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152350461 - NM_005431 XRCC2 0 . . . 2.05 65.5 28 3.98 No 21 -1.88 No 0 0 No -23 0.58 No 42 83.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41205657 - NM_007294 BRCA1 0 . . . 2.11 81.49 21 5.01 No 40 0.83 Yes 0 0 No -20 0.5 No 18 52.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68564334 + NM_133509 RAD51B 0 . . . 1.19 72.7 20 4.42 No 63 0.83 Yes 0 0 No -17 0.5 No 39 44.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921342 + NM_133509 RAD51B 0 . . . 2.18 71.13 23 5.25 No 74 -5.74 No 0 0 No -25 0.9 Yes 46 68.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32943405 + NM_000059 BRCA2 0 . . . 6.25 76.78 12 4.83 No 50 0.32 No 0 0 No -22 0.66 Yes 48 57.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68317117 + NM_133509 RAD51B 0 . . . 5.44 75.43 28 6.3 Yes 68 0.39 No 0 0 No -27 0.91 Yes 32 65.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69063717 + NM_133509 RAD51B 0 . . . 2.76 0 19 4.3 No 71 1.29 Yes 0 0 No -18 0.58 No 38 60.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68491728 + NM_133509 RAD51B 0 . . . 3.28 80.88 40 5.44 No 45 0.85 Yes 0 0 No -29 0.73 Yes 49 84.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47630864 + NM_000251 MSH2 0 . . . 5.19 65.51 16 5.1 No 47 0.71 No 0 0 No -19 0.65 No 35 62.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68427142 + NM_133509 RAD51B 0 . . . 7.29 90.15 31 5.74 Yes 32 1.04 Yes 0 0 No -30 0.8 Yes 47 69.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108229381 + NM_000051 ATM 0 . . . 1.78 70.55 18 4.9 No 64 -5.22 No 0 0 No -36 0.73 Yes 51 43.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68719686 + NM_133509 RAD51B 0 . . . 3.77 74.68 21 5.06 No 22 -1.12 No 0 0 No -30 0.58 No 36 65.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68885783 + NM_133509 RAD51B 0 . . . 1.69 0 47 6.85 Yes 50 -1.92 No 0 0 No -42 0.51 No 50 74.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32916647 + NM_000059 BRCA2 0 . . . 4.99 84.3 17 6.91 Yes 54 0.98 Yes 0 0 No -29 0.37 No 50 60.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131902518 + NM_005732 RAD50 0 . . . 5.08 70.48 28 5.2 No 39 1.18 Yes 0 0 No -28 0.87 Yes 19 70.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68377855 + NM_133509 RAD51B 0 . . . 2.28 68.36 19 5.74 Yes 70 0.78 Yes 0 0 No -28 0.32 No 45 78.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1213077 + NM_000455 STK11 0 . . . 0.75 63.93 41 6.47 Yes -4 0.7 No 0 0 No -23 0.67 Yes 43 59.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68775713 + NM_004360 CDH1 0 . . . 1.08 0 42 6.61 Yes 45 1.2 Yes 0 0 No -29 0.95 Yes 38 56.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29101985 - NM_001005735 CHEK2 0 . . . 8.42 75.06 17 6.15 Yes 64 1.12 Yes 0 0 No -37 0.4 No 38 70.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59827804 - NM_032043 BRIP1 0 . . . 0.59 68.8 29 5.43 No 31 0.62 No 0 0 No -28 0.27 No 19 27.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68660809 + NM_133509 RAD51B 0 . . . 11.15 93.27 22 4.8 No 47 0.54 No 0 0 No -21 0.9 Yes 44 94.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48022052 + NM_000179 MSH6 0 . . . 3.53 85.87 34 6.24 Yes 33 1.13 Yes 0 0 No -33 0.82 Yes 50 69.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41270570 - NM_007294 BRCA1 0 . . . 0.88 79.25 25 5.38 No 4 0.23 No 0 0 No -24 0.85 Yes 44 74.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68903458 + NM_133509 RAD51B 0 . . . 5.58 77.63 45 6.69 Yes 43 1.23 Yes 0 0 No -23 0.25 No 51 76.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89624508 + NM_000314 PTEN 0 . . . 0.59 63.95 26 4.91 No 64 0.04 No 0 0 No -16 0.32 No 46 71.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59757511 - NM_032043 BRIP1 0 . . . 0.42 74.73 18 4.87 No 42 1.37 Yes 0 0 No -17 0.35 No 16 95.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89622443 + NM_000314 PTEN 0 . . . 1.16 0 19 5 No 19 1.16 Yes 0 0 No -18 0.56 No 39 97.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89677982 + NM_000314 PTEN 0 . . . 2.96 74.5 38 5.31 No -4 1.36 Yes 0 0 No -37 0.74 Yes 54 66.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68854372 + NM_004360 CDH1 0 . . . 0.77 84.22 16 4.98 No 33 1.12 Yes 0 0 No -20 0.84 Yes 50 44.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131925711 + NM_005732 RAD50 0 . . . 1.46 63 12 5.2 No 13 2.02 Yes 0 0 No -21 0.35 No 45 55.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68448614 + NM_133509 RAD51B 0 . . . 2.5 0 14 7 Yes 61 -4.72 No 0 0 No -31 0.56 No 40 37.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105206725 + NM_021930 RINT1 0 . . . 5.23 75.61 18 4.9 No 69 -4.88 No 0 0 No -23 0.71 Yes 46 43.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89731219 + NM_000314 PTEN 0 . . . 7.12 82.95 15 4.08 No 40 0.2 No 0 0 No -18 0.4 No 18 50.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190650894 + NM_000534 PMS1 0 . . . 2.25 70.31 33 4.96 No 49 -3.95 No 0 0 No -20 0.35 No 46 25.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23626237 - NM_024675 PALB2 0 . . . 0.09 74.68 31 4.4 No 4 0.41 No 0 0 No -26 0.58 No 54 82.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68585878 + NM_133509 RAD51B 0 . . . 8.24 77.8 23 5.39 No 45 1.55 Yes 0 0 No -22 0.57 No 13 68.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59797526 - NM_032043 BRIP1 0 . . . 7.04 80.38 15 4.58 No 42 0.74 No 0 0 No -46 0.74 Yes 50 36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108156926 + NM_000051 ATM 0 . . . 3.7 74.68 38 5.93 Yes 34 0.66 No 0 0 No -19 0.63 No 37 42.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69079480 + NM_133509 RAD51B 0 . . . 0.06 62.98 10 4 No 58 -4.19 No 0 0 No -27 0.63 No 50 56.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59854801 - NM_032043 BRIP1 0 . . . 0.26 66.39 45 6.57 Yes 13 1.18 Yes 0 0 No -44 0.5 No 45 73.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37048669 + NM_000249 MLH1 0 . . . 1.66 64.8 22 4.8 No 71 0.51 No 0 0 No -17 0.36 No 50 62.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68387969 + NM_133509 RAD51B 0 . . . 3.06 92.78 24 6.74 Yes 65 -1.96 No 0 0 No -23 0.74 Yes 46 82.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41279254 - NM_007294 BRCA1 0 . . . 1.14 69.62 16 4.47 No 59 -2.18 No 0 0 No -15 0.91 Yes 42 44.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68530973 + NM_133509 RAD51B 0 . . . 7.58 93.23 16 4.69 No 13 0.26 No 0 0 No -38 0.7 Yes 45 91.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68987571 + NM_133509 RAD51B 0 . . . 5.84 75.68 22 5.56 Yes 59 -5.24 No 0 0 No -25 0.91 Yes 48 54.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47744836 + NM_000251 MSH2 0 . . . 9.23 87.01 36 5.21 No 1 1.81 Yes 0 0 No -35 0.78 Yes 48 80.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1220783 + NM_000455 STK11 0 . . . 6.49 75.1 21 4.34 No 52 0.66 No 0 0 No -25 0.68 Yes 47 48.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84380684 - NM_139076 FAM175A 0 . . . 3.54 67.69 29 4.91 No 40 0.05 No 0 0 No -23 0.57 No 48 78.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69097521 + NM_133509 RAD51B 0 . . . 1.04 0 24 5.38 No 49 1.54 Yes 0 0 No -23 0.46 No 41 38.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56801993 + NM_058216 RAD51C 0 . . . 1 67.29 19 5 No 4 1.14 Yes 0 0 No -18 0.6 No 54 66.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68449208 + NM_133509 RAD51B 0 . . . 5.95 75.86 15 5.69 Yes 11 0.75 No 0 0 No -28 0.54 No 47 86.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47702582 + NM_000251 MSH2 0 . . . 4.58 69.95 14 5.2 No 9 0.98 Yes 0 0 No -23 0.82 Yes 49 76.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215599203 - NM_000465 BARD1 0 . . . 0.91 71.14 16 4.69 No 11 1.08 Yes 0 0 No -25 0.64 No 47 83.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104180873 - NM_001100119 XRCC3 0 . . . 3.55 85.66 20 5.1 No 44 -1 No 0 0 No -27 0.64 No 42 60.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47684229 + NM_000251 MSH2 0 . . . 1.63 71.71 24 5.15 No 50 1.12 Yes 0 0 No -23 0.75 Yes 47 33.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68853766 + NM_133509 RAD51B 0 . . . 6.49 88.09 36 4.51 No 45 0.32 No 0 0 No -35 0.82 Yes 43 95.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131933443 + NM_005732 RAD50 0 . . . 4.76 74.15 22 5.2 No 50 0.84 Yes 0 0 No -26 0.74 Yes 50 64.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68835780 + NM_133509 RAD51B 0 . . . 4.42 81.03 42 7.36 Yes 4 1.02 Yes 0 0 No -33 0.3 No 42 89.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90968105 - NM_002485 NBN 0 . . . 1.49 68.55 10 4.48 No 69 -3.89 No 0 0 No -19 0.28 No 46 79.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69124538 + NM_133509 RAD51B 0 . . . 5.87 78.23 26 5.92 Yes 12 0.8 Yes 0 0 No -25 0.61 No 46 96.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68844352 + NM_133509 RAD51B 0 . . . 11.33 80.98 24 6.76 Yes 66 0.2 No 0 0 No -23 0.62 No 45 66.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41240922 - NM_007294 BRCA1 0 . . . 4.47 73.97 20 5.1 No 49 1.03 Yes 0 0 No -19 0.68 Yes 47 51.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6024775 - NM_000535 PMS2 0 . . . 2.95 80.22 20 5.91 Yes 67 -4.75 No 0 0 No -19 0.8 Yes 47 68.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68904065 + NM_133509 RAD51B 0 . . . 3.46 79.28 20 7.14 Yes 7 0.55 No 0 0 No -19 0.61 No 33 43.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41278466 - NM_007294 BRCA1 0 . . . 4.41 85.65 23 5.92 Yes 10 1.68 Yes 0 0 No -22 0.59 No 48 95.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190735873 + NM_000534 PMS1 0 . . . 3.88 80.33 45 5.38 No 43 0.94 Yes 0 0 No -37 0.82 Yes 52 84.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32927720 + NM_000059 BRCA2 0 . . . 2.97 74.48 28 6.27 Yes 31 1.94 Yes 0 0 No -27 0.6 No 27 70.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45807112 - NM_001048171 MUTYH 0 . . . 2.76 72.04 31 5.29 No 52 -3.26 No 0 0 No -57 0.5 No 30 59.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47706104 + NM_000251 MSH2 0 . . . 5.09 84.82 22 5.29 No 58 1.16 Yes 0 0 No -25 0.56 No 40 37.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68961647 + NM_133509 RAD51B 0 . . . 3.53 82.58 14 5.57 Yes 66 -4.21 No 0 0 No -28 0.76 Yes 50 79.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68649084 + NM_133509 RAD51B 0 . . . 4.12 78.58 29 5.63 Yes 25 0.93 Yes 0 0 No -29 0.6 No 38 40.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68450955 + NM_133509 RAD51B 0 . . . 2.54 77.97 17 4.8 No 59 1.01 Yes 0 0 No -28 0.28 No 51 45.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108217310 + NM_000051 ATM 0 . . . 0.1 71.64 55 7.06 Yes 53 0.22 No 0 0 No -43 0.29 No 20 32.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90946157 - NM_002485 NBN 0 . . . 3.62 63.44 21 3.81 No 10 -2.29 No 0 0 No -21 0.75 Yes 32 68.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21984123 - NM_000077 CDKN2A 0 . . . 1.08 67.39 17 6.36 Yes 42 -2.99 No 0 0 No -27 0.89 Yes 51 55.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108235214 + NM_000051 ATM 0 . . . 3.57 71.2 27 5.66 Yes 14 1.3 Yes 0 0 No -26 0.93 Yes 44 76.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89631893 + NM_000314 PTEN 0 . . . 2.04 69.15 69 7.39 Yes 50 0.77 Yes 0 0 No -36 0.87 Yes 46 56.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190737180 + NM_000534 PMS1 0 . . . 1.19 0 27 6.03 Yes 42 0.72 No 0 0 No -26 0.67 Yes 29 89.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105194987 + NM_021930 RINT1 0 . . . 1.1 66.46 25 4.34 No 59 1.47 Yes 0 0 No -19 0.69 Yes 42 91.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68870114 + NM_133509 RAD51B 0 . . . 5.16 71.57 16 4.66 No 30 1.43 Yes 0 0 No -51 0.81 Yes 41 92.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190682316 + NM_000534 PMS1 0 . . . 0.96 66 44 6.71 Yes 20 -1.95 No 0 0 No -43 0.55 No 48 14.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68486250 + NM_133509 RAD51B 0 . . . 0.31 0 32 5.72 Yes 61 -4.98 No 0 0 No -47 0.81 Yes 52 67.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68878884 + NM_133509 RAD51B 0 . . . 5.04 77.48 9 4.76 No 18 0.56 No 0 0 No -16 0.42 No 40 80.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152373753 - NM_005431 XRCC2 0 . . . 7.71 86.42 26 5.6 Yes 9 1.22 Yes 0 0 No -25 0.47 No 49 90.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69106447 + NM_133509 RAD51B 0 . . . 0.51 71.41 15 5.39 No 18 0.64 No 0 0 No -30 0.51 No 40 52.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89672491 + NM_000314 PTEN 0 . . . 8.09 84.43 14 4.39 No 29 1.25 Yes 0 0 No -53 0.72 Yes 29 65.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68632335 + NM_133509 RAD51B 0 . . . 2.74 76.58 15 4.21 No 3 0.59 No 0 0 No -32 0.49 No 55 40.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190710302 + NM_000534 PMS1 0 . . . 3.84 75.98 23 3.39 No 2 0.53 No 0 0 No -21 0.46 No 44 86.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68610901 + NM_133509 RAD51B 0 . . . 2.27 74.72 15 4.58 No 36 1.01 Yes 0 0 No -17 0.45 No 39 89.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68300172 + NM_133509 RAD51B 0 . . . 9.56 88.13 37 8 Yes 67 -3.11 No 0 0 No -36 0.84 Yes 47 80.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89634815 + NM_000314 PTEN 0 . . . 5.72 74.91 24 6.1 Yes 25 0.89 Yes 0 0 No -25 0.63 No 33 87.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68360644 + NM_133509 RAD51B 0 . . . 2.26 64.97 25 5.2 No 62 1.36 Yes 0 0 No -44 0.52 No 35 58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89652661 + NM_000314 PTEN 0 . . . 2.62 72.8 25 5.57 Yes 1 0.77 Yes 0 0 No -24 0.71 Yes 50 56.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68739520 + NM_133509 RAD51B 0 . . . 5.21 84.22 26 4.83 No 32 1.02 Yes 0 0 No -23 0.84 Yes 50 93.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108139651 + NM_000051 ATM 0 . . . 2.7 74.08 24 6.62 Yes 3 0.4 No 0 0 No -23 0.65 No 42 40.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75516871 - NM_001040108 MLH3 0 . . . 3.88 66.99 22 3.83 No 73 1.17 Yes 0 0 No -24 0.53 No 29 87.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68681728 + NM_133509 RAD51B 0 . . . 5.75 89.91 17 5.71 Yes 10 0.19 No 0 0 No -23 0.47 No 48 87.87 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152369378 - NM_005431 XRCC2 0 . . . 3.83 80.85 21 5.1 No 29 0.63 No 0 0 No -29 0.85 Yes 46 42.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21987268 - NM_000077 CDKN2A 0 . . . 3.66 72.82 31 6.08 Yes 5 0.94 Yes 0 0 No -30 0.94 Yes 44 93.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37049625 + NM_000249 MLH1 0 . . . 3.66 66.73 23 5 No -1 0.36 No 0 0 No -22 0.54 No 47 59.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215598050 - NM_000465 BARD1 0 . . . 7.75 85.02 30 5.49 No 2 0.22 No 0 0 No -29 0.76 Yes 49 59.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68831112 + NM_133509 RAD51B 0 . . . 2.85 82.07 20 5 No 76 -4.11 No 0 0 No -19 0.67 Yes 50 39.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68519259 + NM_133509 RAD51B 0 . . . 5.55 78.78 33 6.53 Yes 43 0.9 Yes 0 0 No -32 0.44 No 42 84.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68848012 + NM_133509 RAD51B 0 . . . 3.17 79.25 33 6.56 Yes 61 1.33 Yes 0 0 No -32 0.66 No 36 90.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131895354 + NM_005732 RAD50 0 . . . 0.04 64.93 32 5.11 No 42 -2.33 No 0 0 No -31 0.44 No 34 68.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68768092 + NM_133509 RAD51B 0 . . . 4.84 78.01 17 4.69 No 51 0.07 No 0 0 No -39 0.92 Yes 49 73.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47800718 + NM_000251 MSH2 0 . . . 2.95 70.64 11 4.77 No 2 0.34 No 0 0 No -23 0.56 No 41 66.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68782060 + NM_004360 CDH1 0 . . . 6.69 88.44 18 4.58 No 36 0.39 No 0 0 No -39 0.86 Yes 22 79.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68983429 + NM_133509 RAD51B 0 . . . 5.8 70.64 16 4.85 No 44 0.78 Yes 0 0 No -22 0.71 Yes 44 55.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94196684 - NM_005591 MRE11 0 . . . 1.28 62.9 16 4.69 No 28 0.34 No 0 0 No -22 0.34 No 42 71.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94199655 - NM_005591 MRE11 0 . . . 5.02 68.43 38 6.84 Yes 76 -2.34 No 0 0 No -29 0.51 No 38 71.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75481953 - NM_001040108 MLH3 0 . . . 4.6 65.53 29 6.3 Yes 57 1.58 Yes 0 0 No -28 0.8 Yes 44 56.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108110789 + NM_000051 ATM 0 . . . 3.53 73.77 17 4.53 No 73 -4.72 No 0 0 No -25 0.55 No 42 82.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68454136 + NM_133509 RAD51B 0 . . . 1.95 67.45 29 5.32 No 44 1.88 Yes 0 0 No -28 0.57 No 46 75.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32947923 + NM_000059 BRCA2 0 . . . 0.72 0 30 6.48 Yes 15 0.5 No 0 0 No -29 0.94 Yes 57 63.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68652723 + NM_133509 RAD51B 0 . . . 0.41 75.37 26 6.63 Yes 75 0.37 No 0 0 No -25 0.81 Yes 47 51.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68338526 + NM_133509 RAD51B 0 . . . 0.27 68.92 24 5.45 No 56 0.03 No 0 0 No -24 0.66 No 40 37.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190648804 + NM_000534 PMS1 0 . . . 1.34 73.11 17 4.8 No 39 1.1 Yes 0 0 No -21 0.88 Yes 32 65.41 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29083287 - NM_001005735 CHEK2 0 . . . 2.18 74.31 36 5.76 Yes 1 0.73 No 0 0 No -25 0.67 Yes 49 54.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68755102 + NM_133509 RAD51B 0 . . . 2.51 73.1 97 9.88 Yes 29 0.21 No 0 0 No -22 0.62 No 41 85.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131912358 + NM_005732 RAD50 0 . . . 4.18 85.23 76 9.06 Yes 26 0.75 No 0 0 No -23 0.7 Yes 43 79.03 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108215063 + NM_000051 ATM 0 . . . 4.73 0 42 6.49 Yes 6 0.37 No 0 0 No -28 0.76 Yes 51 68.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68492923 + NM_133509 RAD51B 0 . . . 0.36 65.85 19 4.8 No 18 0.8 Yes 0 0 No -19 0.56 No 40 77.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68967554 + NM_133509 RAD51B 0 . . . 3.75 69.66 36 6.95 Yes 14 1.4 Yes 0 0 No -35 0.61 No 44 88.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41001929 + NM_001164269 RAD51 0 . . . 6.98 90.94 15 4.58 No 0 0.72 No 0 0 No -46 0.7 Yes 46 80.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152370758 - NM_005431 XRCC2 0 . . . 0.72 77.77 23 4.9 No 43 1.42 Yes 0 0 No -22 0.9 Yes 15 91.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94197078 - NM_005591 MRE11 0 . . . 2.47 0 15 5.31 No 52 0.9 Yes 0 0 No -26 0.5 No 35 81.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6032357 - NM_000535 PMS2 0 . . . 0.06 0 33 5.98 Yes 30 0.8 Yes 0 0 No -32 0.39 No 40 85.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48028717 + NM_000179 MSH6 0 . . . 5.44 82.2 20 3.34 No 1 1.38 Yes 0 0 No -35 0.86 Yes 43 50.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69107938 + NM_133509 RAD51B 0 . . . 1.49 69.03 24 3.46 No 61 -2.15 No 0 0 No -19 0.82 Yes 34 96.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75486029 - NM_001040108 MLH3 0 . . . 2.63 68.36 33 5.43 No 16 1.09 Yes 0 0 No -32 0.83 Yes 42 87.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6049504 - NM_000535 PMS2 0 . . . 6.8 84.56 24 3.81 No 8 0.85 Yes 0 0 No -26 0.75 Yes 50 84.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41201589 - NM_007294 BRCA1 0 . . . 1.44 0 22 5 No 70 0.13 No 0 0 No -21 0.51 No 50 45.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90948899 - NM_002485 NBN 0 . . . 0.62 66.85 11 4.87 No 63 0.06 No 0 0 No -36 0.47 No 50 37.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190656036 + NM_000534 PMS1 0 . . . 6.18 83.05 26 5 No 48 1.2 Yes 0 0 No -25 0.74 Yes 51 58.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68315305 + NM_133509 RAD51B 0 . . . 0.14 66.82 24 4.16 No 62 1.02 Yes 0 0 No -23 0.56 No 21 34.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47762010 + NM_000251 MSH2 0 . . . 6.47 87.07 32 5.99 Yes 16 0.7 No 23 0.75 Yes -17 0.52 No 47 61.01 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr10 89688213 + NM_000314 PTEN 0 . . . 7.45 89.76 20 4.68 No 3 1.19 Yes 0 0 No -20 0.35 No 40 68.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215613999 - NM_000465 BARD1 0 . . . 7.53 86.03 23 5.2 No 0 1.78 Yes 0 0 No -22 0.8 Yes 42 74.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68812558 + NM_133509 RAD51B 0 . . . 5.75 85.22 26 6.45 Yes 3 1.02 Yes 0 0 No -25 0.87 Yes 55 54.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68286461 + NM_133509 RAD51B 0 . . . 1.92 72.86 46 6.75 Yes -1 0.37 No 0 0 No -25 0.81 Yes 36 66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215606943 - NM_000465 BARD1 0 . . . 6.14 69.85 33 7.99 Yes 13 0.61 No 0 0 No -32 0.63 No 45 93.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68486443 + NM_133509 RAD51B 0 . . . 5.08 79.29 18 9.38 Yes 4 0.57 No 0 0 No -39 0.35 No 54 54.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510575 - NM_001040108 MLH3 0 . . . 6.42 79.91 40 7.72 Yes 57 1.13 Yes 0 0 No -25 0.81 Yes 54 65.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47781883 + NM_000251 MSH2 0 . . . 2.78 65.31 14 6.17 Yes 26 1.77 Yes 0 0 No -13 0.16 No 45 58.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68423439 + NM_133509 RAD51B 0 . . . 1.41 67.83 18 5.07 No 15 0.54 No 0 0 No -36 0.71 Yes 36 68.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32890960 + NM_000059 BRCA2 0 . . . 6.09 90.97 16 4.67 No 30 1.1 Yes 0 0 No -20 0.87 Yes 43 63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108093183 + NM_000051 ATM 0 . . . 2.98 85.11 27 4.62 No 6 0.45 No 0 0 No -26 0.67 Yes 52 77.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68837443 + NM_133509 RAD51B 0 . . . 4.71 67.86 17 4.69 No 72 -3.01 No 0 0 No -22 0.82 Yes 38 56.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131908634 + NM_005732 RAD50 0 . . . 2.18 71.61 28 4.2 No 54 1.39 Yes 0 0 No -27 0.43 No 30 52.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69096772 + NM_133509 RAD51B 0 . . . 3.8 87.93 32 5.88 Yes 74 0.89 Yes 0 0 No -28 0.49 No 49 90.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68469125 + NM_133509 RAD51B 0 . . . 4.48 68.95 17 4.58 No 40 1.09 Yes 0 0 No -25 0.52 No 39 79.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7591960 - NM_000546 TP53 0 . . . 2.77 88.88 25 6.58 Yes 41 -2.74 No 0 0 No -29 0.44 No 38 39.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68604875 + NM_133509 RAD51B 0 . . . 9.15 100 22 5.08 No 67 -2.7 No 0 0 No -21 0.82 Yes 48 89.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59856897 - NM_032043 BRIP1 0 . . . 7.01 79.55 31 6.71 Yes 16 1.12 Yes 0 0 No -30 0.84 Yes 42 93.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89674319 + NM_000314 PTEN 0 . . . 4.42 75.85 31 6.08 Yes 19 0.47 No 0 0 No -30 0.92 Yes 36 76.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59917288 - NM_032043 BRIP1 0 . . . 4.81 79.04 32 7.59 Yes 22 1.44 Yes 0 0 No -31 0.68 Yes 36 44.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68785450 + NM_004360 CDH1 0 . . . 3.14 79.91 23 6.99 Yes 2 1.53 Yes 0 0 No -22 0.48 No 22 66.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6016552 - NM_000535 PMS2 0 . . . 6.15 73.46 16 4.63 No 17 1 Yes 0 0 No -28 0.48 No 41 57.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89639127 + NM_000314 PTEN 0 . . . 6.44 92 33 5.79 Yes 51 0.82 Yes 0 0 No -32 0.61 No 44 38.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47629120 + NM_000251 MSH2 0 . . . 4.15 72.34 25 5.48 No 47 1.79 Yes 0 0 No -24 0.81 Yes 43 74.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68417156 + NM_133509 RAD51B 0 . . . 7.66 86.91 15 4.32 No 53 -1.03 No 0 0 No -31 0.86 Yes 48 67.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47741096 + NM_000251 MSH2 0 . . . 2.61 81.72 17 4.24 No 3 1.05 Yes 0 0 No -43 0.66 No 24 66.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32924861 + NM_000059 BRCA2 0 . . . 0.38 76.63 19 4.8 No 58 -3.87 No 0 0 No -18 0.25 No 43 75.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47673095 + NM_000251 MSH2 0 . . . 4.35 82.86 23 3.92 No 14 0.07 No 0 0 No -22 0.59 No 49 33.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68507932 + NM_133509 RAD51B 0 . . . 8.07 78.77 20 5.73 Yes 75 -1.19 No 0 0 No -19 0.58 No 43 59.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41194619 - NM_007294 BRCA1 0 . . . 5.3 75.36 38 6.1 Yes 3 1.43 Yes 0 0 No -31 0.76 Yes 40 84.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68757132 + NM_133509 RAD51B 0 . . . 9.55 89.15 18 5.29 No 49 0.07 No 0 0 No -21 0.65 No 53 49.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69029217 + NM_133509 RAD51B 0 . . . 6.71 80.69 22 5.52 No 5 1.41 Yes 0 0 No -21 0.83 Yes 53 76.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40990571 + NM_001164269 RAD51 0 . . . 3.04 84.47 25 4.85 No 7 1.43 Yes 0 0 No -24 0.58 No 51 87.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32936111 + NM_000059 BRCA2 0 . . . 7.18 93.4 14 4 No -3 0.51 No 0 0 No -17 0.39 No 46 63.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68860491 + NM_133509 RAD51B 0 . . . 2.49 70.55 18 5.42 No 51 -3.3 No 0 0 No -24 0.87 Yes 47 41.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29139125 - NM_001005735 CHEK2 0 . . . 1.48 65.68 17 4.87 No 67 0.62 No 0 0 No -21 0.82 Yes 43 55.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69026142 + NM_133509 RAD51B 0 . . . 5.66 76.79 32 5.74 Yes 58 0.31 No 0 0 No -31 0.93 Yes 22 50.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84386136 - NM_139076 FAM175A 0 . . . 0.92 0 28 5.29 No 36 0.81 Yes 0 0 No -27 0.85 Yes 51 79.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90983067 - NM_002485 NBN 0 . . . 2.41 69.4 25 5.57 Yes 53 1.04 Yes 0 0 No -24 0.81 Yes 44 63.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68575804 + NM_133509 RAD51B 0 . . . 0.82 72.4 17 4.8 No 33 0.66 No 0 0 No -26 0.41 No 44 65.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59901510 - NM_032043 BRIP1 0 . . . 0.38 0 10 4.9 No 54 0.82 Yes 0 0 No -26 0.57 No 55 66.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68669418 + NM_133509 RAD51B 0 . . . 1.08 84.22 28 5.35 No 33 0.92 Yes 0 0 No -22 0.68 Yes 50 42.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41010687 + NM_001164269 RAD51 0 . . . 0.3 76.63 37 5.93 Yes 75 -5.15 No 0 0 No -24 0.35 No 53 64.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23635726 - NM_024675 PALB2 0 . . . 2.63 73.9 29 7.32 Yes 62 0.72 No 0 0 No -28 0.84 Yes 39 89.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90996990 - NM_002485 NBN 0 . . . 2.95 79.62 27 6.86 Yes 48 1.62 Yes 30 0.51 Yes -26 0.81 Yes 49 89.39 Yes BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: Yes chr14 68894523 + NM_133509 RAD51B 0 . . . 0.49 70.02 29 5.9 Yes 8 0.8 Yes 0 0 No -24 0.59 No 42 41.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21995624 - NM_000077 CDKN2A 0 . . . 10.87 85.82 13 5.74 Yes 46 2.53 Yes 0 0 No -26 0.59 No 12 84.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131909625 + NM_005732 RAD50 0 . . . 2.9 69.3 20 5.66 Yes 50 1.28 Yes 0 0 No -30 0.56 No 37 40.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90981573 - NM_002485 NBN 0 . . . 8.89 84.11 23 5.2 No 38 0.66 No 0 0 No -22 0.91 Yes 49 35.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32907179 + NM_000059 BRCA2 0 . . . 2.66 0 35 6 Yes 34 -2.51 No 0 0 No -34 0.51 No 43 46.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68521785 + NM_133509 RAD51B 0 . . . 8.51 87.69 29 7.35 Yes 55 -2.27 No 0 0 No -28 0.95 Yes 49 51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68849962 + NM_133509 RAD51B 0 . . . 3.49 71.36 29 5.66 Yes 4 1.75 Yes 0 0 No -28 0.48 No 54 53.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68700448 + NM_133509 RAD51B 0 . . . 4.78 79.73 23 5.39 No 23 -1.56 No 0 0 No -25 0.88 Yes 47 92.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68908485 + NM_133509 RAD51B 0 . . . 0.29 73.83 25 5.92 Yes 29 0.74 No 0 0 No -24 0.78 Yes 50 84.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215664424 - NM_000465 BARD1 0 . . . 6.67 82.5 23 5 No 17 0.07 No 0 0 No -21 0.77 Yes 41 65.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68389145 + NM_133509 RAD51B 0 . . . 3.61 81.36 52 6.16 Yes 36 1.03 Yes 0 0 No -22 0.5 No 48 57.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131970006 + NM_005732 RAD50 0 . . . 0.92 0 20 5.1 No 53 0.23 No 0 0 No -37 0.8 Yes 53 51.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68880330 + NM_133509 RAD51B 0 . . . 2.99 57.87 28 5.86 Yes 1 0.44 No 0 0 No -32 0.73 Yes 49 35.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108102682 + NM_000051 ATM 0 . . . 3.73 68.41 14 5.48 No 8 1.5 Yes 0 0 No -27 0.66 No 50 71.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47667154 + NM_000251 MSH2 0 . . . 5 75.83 13 5.21 No 44 0.33 No 0 0 No -26 0.82 Yes 48 79.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105181081 + NM_021930 RINT1 0 . . . 2.64 81.87 19 8.67 Yes -4 1.36 Yes 0 0 No -28 0.32 No 54 48.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47750862 + NM_000251 MSH2 0 . . . 2.73 67.75 22 6.86 Yes 28 0.77 Yes 0 0 No -21 0.96 Yes 39 60.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68671646 + NM_133509 RAD51B 0 . . . 1.59 74.93 19 5 No -3 0.11 No 0 0 No -24 0.45 No 29 43.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68860643 + NM_133509 RAD51B 0 . . . 8.35 77.77 19 4.77 No 52 0.95 Yes 0 0 No -18 0.52 No 46 52.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69035856 + NM_133509 RAD51B 0 . . . 1.04 77.64 22 4.97 No 40 1.14 Yes 0 0 No -21 0.49 No 18 87.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68678412 + NM_133509 RAD51B 0 . . . 2.73 81.89 14 5.2 No 57 -4.14 No 0 0 No -20 0.37 No 50 78.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32910063 + NM_000059 BRCA2 0 . . . 5.24 73.15 17 4.8 No 2 1 Yes 0 0 No -26 0.81 Yes 19 61.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37043874 + NM_000249 MLH1 0 . . . 1.27 51.56 15 5.71 Yes 62 0.19 No 0 0 No -28 0.35 No 49 68.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68463404 + NM_133509 RAD51B 0 . . . 5.13 80.95 32 4.19 No 8 0.41 No 0 0 No -45 0.34 No 50 74.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68751515 + NM_133509 RAD51B 0 . . . 7.87 94.18 22 7.12 Yes 4 0.56 No 0 0 No -38 0.89 Yes 43 81.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105175104 + NM_021930 RINT1 0 . . . 8.35 79.27 23 4.77 No 36 -2.82 No 0 0 No -22 0.88 Yes 44 59.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52442915 - NM_004656 BAP1 0 . . . 6.95 82.54 14 4.32 No 49 1.24 Yes 0 0 No -38 0.55 No 32 94.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59870121 - NM_032043 BRIP1 0 . . . 1.4 0 22 5.23 No 26 0.35 No 0 0 No -35 0.39 No 25 54.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48012065 + NM_000179 MSH6 0 . . . 3.41 69.06 55 5.77 Yes 14 1.14 Yes 0 0 No -46 0.63 No 44 96.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29091925 - NM_001005735 CHEK2 0 . . . 6.24 79.89 35 6.4 Yes 19 0.57 No 0 0 No -31 0.51 No 39 86.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68819043 + NM_004360 CDH1 0 . . . 4.47 0 25 5.32 No 39 0.81 Yes 0 0 No -24 0.57 No 49 87.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33430235 - NM_002878 RAD51D 0 . . . 3.92 71.18 17 4.79 No 2 0.75 No 0 0 No -21 0.71 Yes 53 51.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45798208 - NM_001048171 MUTYH 0 . . . 5.73 76.85 17 5.68 Yes 18 0.96 Yes 0 0 No -31 0.33 No 40 97.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90957174 - NM_002485 NBN 0 . . . 5.97 74.57 49 7.33 Yes 42 0.86 Yes 0 0 No -31 0.33 No 41 83.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47790597 + NM_000251 MSH2 0 . . . 7.13 82.04 18 5.27 No -2 0.43 No 0 0 No -21 0.67 Yes 48 54.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21990583 - NM_000077 CDKN2A 0 . . . 6.77 82.89 24 6.94 Yes 63 1.44 Yes 0 0 No -23 0.76 Yes 42 64.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68390197 + NM_133509 RAD51B 0 . . . 3.45 85.02 44 7.87 Yes 3 1.16 Yes 0 0 No -43 0.78 Yes 41 55.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41023957 + NM_001164269 RAD51 0 . . . 3.24 76.52 23 3.97 No 20 1.26 Yes 0 0 No -22 0.58 No 38 90.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47725502 + NM_000251 MSH2 0 . . . 5.14 74.03 25 5.99 Yes 9 1.73 Yes 0 0 No -24 0.81 Yes 49 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29122164 - NM_001005735 CHEK2 0 . . . 4.31 90.44 21 4.8 No 34 0.97 Yes 0 0 No -20 0.94 Yes 24 87.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68482985 + NM_133509 RAD51B 0 . . . 4.24 70.97 18 4.8 No -3 0.92 Yes 0 0 No -20 0.43 No 53 37.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29115177 - NM_001005735 CHEK2 0 . . . 2.17 0 43 6.86 Yes 20 0.63 No 0 0 No -31 0.45 No 38 67.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47793868 + NM_000251 MSH2 0 . . . 7.5 83.52 21 5.19 No -4 0.73 No 0 0 No -20 0.66 Yes 42 71.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47769771 + NM_000251 MSH2 0 . . . 3.51 72.68 30 5.64 Yes 1 -0.93 No 0 0 No -29 0.79 Yes 42 62.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69113395 + NM_133509 RAD51B 0 . . . 4.7 77.99 9 3.07 No 6 1.22 Yes 0 0 No -51 0.63 No 40 70.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68297163 + NM_133509 RAD51B 0 . . . 2.02 78.96 38 6.24 Yes 31 0.41 No 0 0 No -25 0.82 Yes 17 87.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75494750 - NM_001040108 MLH3 0 . . . 10.59 83.24 18 4.72 No 41 0.26 No 0 0 No -22 0.42 No 21 54.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131892202 + NM_005732 RAD50 0 . . . 3.21 71.69 23 5 No 59 -3.42 No 0 0 No -22 0.82 Yes 47 51.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108154414 + NM_000051 ATM 0 . . . 2.51 80.75 52 7.55 Yes 47 0.2 No 0 0 No -27 0.84 Yes 40 54.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105204918 + NM_021930 RINT1 0 . . . 2.75 58.65 31 6.48 Yes 49 0.03 No 0 0 No -30 0.7 Yes 44 23.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33427224 - NM_002878 RAD51D 0 . . . 2.55 75.45 29 6.3 Yes 71 0.38 No 0 0 No -24 0.84 Yes 46 66.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131900891 + NM_005732 RAD50 0 . . . 2.98 58.69 32 5.63 Yes 72 0.56 No 0 0 No -28 0.42 No 37 70.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84400310 - NM_139076 FAM175A 0 . . . 4.03 68.59 22 3.69 No 23 1.3 Yes 0 0 No -19 0.36 No 40 65.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68709045 + NM_133509 RAD51B 0 . . . 6.35 72.06 41 6.46 Yes -3 0.57 No 0 0 No -40 0.6 No 47 89.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108127967 + NM_000051 ATM 0 . . . 6.6 79.83 27 7.44 Yes 39 1.68 Yes 0 0 No -27 0.37 No 43 66.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68974460 + NM_133509 RAD51B 0 . . . 1.32 77.03 35 5.67 Yes 42 0.8 Yes 0 0 No -24 0.58 No 16 38.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47741133 + NM_000251 MSH2 0 . . . 5.85 73.7 25 6.35 Yes 40 1.06 Yes 0 0 No -24 0.82 Yes 46 60.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131948278 + NM_005732 RAD50 0 . . . 0.81 67.3 22 5.05 No 64 0.41 No 0 0 No -28 0.75 Yes 54 82.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215593404 - NM_000465 BARD1 0 . . . 7.66 85.25 23 6.67 Yes 17 1.03 Yes 0 0 No -22 0.79 Yes 51 54.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215605652 - NM_000465 BARD1 0 . . . 5.1 92.62 48 7.19 Yes 64 1.22 Yes 0 0 No -24 0.75 Yes 47 49.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59885865 - NM_032043 BRIP1 0 . . . 2.81 72.83 25 5.21 No 50 1.16 Yes 0 0 No -24 0.28 No 48 63.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68677947 + NM_133509 RAD51B 0 . . . 9.23 77.69 15 5.56 Yes 10 1.84 Yes 0 0 No -26 0.68 Yes 48 64.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89696746 + NM_000314 PTEN 0 . . . 9.23 91.78 25 6.76 Yes 14 0.77 Yes 0 0 No -24 0.76 Yes 44 65.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6049632 - NM_000535 PMS2 0 . . . 2.25 59.63 33 8.21 Yes 56 0.89 Yes 0 0 No -32 0.61 No 46 29.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68985006 + NM_133509 RAD51B 0 . . . 7.36 75.88 29 5.29 No 11 0.82 Yes 0 0 No -28 0.9 Yes 47 94.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68448236 + NM_133509 RAD51B 0 . . . 0.91 62.23 26 5.66 Yes 44 -3.64 No 0 0 No -25 0.86 Yes 41 70.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68841604 + NM_004360 CDH1 0 . . . 1.36 64.2 22 5 No 49 0.51 No 0 0 No -21 0.87 Yes 37 54.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89661678 + NM_000314 PTEN 0 . . . 1.68 0 20 4.68 No 5 0.63 No 0 0 No -19 0.91 Yes 53 81.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89635354 + NM_000314 PTEN 0 . . . 4.53 75.56 15 4.58 No -3 0.11 No 0 0 No -14 0.37 No 31 75.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37043378 + NM_000249 MLH1 0 . . . 3.49 72.41 54 5.36 No 68 1.42 Yes 0 0 No -28 0.53 No 47 84.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40990219 + NM_001164269 RAD51 0 . . . 1.59 0 14 4.47 No 52 -0.97 No 0 0 No -30 0.43 No 53 60.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89716778 + NM_000314 PTEN 0 . . . 0.91 84.53 50 5.22 No 62 1.26 Yes 0 0 No -31 0.47 No 51 61.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190681878 + NM_000534 PMS1 0 . . . 1.76 75.05 33 5.07 No 69 -5.07 No 0 0 No -26 0.66 No 51 50.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89683176 + NM_000314 PTEN 0 . . . 8.03 83.17 48 6.97 Yes 9 1.64 Yes 0 0 No -25 0.76 Yes 43 72.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68601898 + NM_133509 RAD51B 0 . . . 6.02 79.85 14 5.27 No 6 1.63 Yes 0 0 No -25 0.57 No 52 68.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104168110 - NM_001100119 XRCC3 0 . . . 5.77 78.93 19 4.99 No 8 1.15 Yes 0 0 No -24 0.54 No 50 90.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104168274 - NM_001100119 XRCC3 0 . . . 0.37 0 30 6.94 Yes 55 0.92 Yes 0 0 No -29 0.75 Yes 52 46.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68727445 + NM_133509 RAD51B 0 . . . 7.3 90.62 31 5.82 Yes 76 0.89 Yes 0 0 No -30 0.51 No 48 54.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190718369 + NM_000534 PMS1 0 . . . 3.75 70.8 24 5.48 No 42 1.13 Yes 0 0 No -23 0.85 Yes 45 54.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68442952 + NM_133509 RAD51B 0 . . . 0.61 84.38 16 6.16 Yes 76 1.47 Yes 0 0 No -31 0.57 No 50 87.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69115947 + NM_133509 RAD51B 0 . . . 4.05 71.34 59 7.72 Yes 60 0.6 No 0 0 No -31 0.62 No 41 81.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68474000 + NM_133509 RAD51B 0 . . . 2.49 78.19 28 4.56 No 5 0.39 No 0 0 No -21 0.58 No 41 64.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68952022 + NM_133509 RAD51B 0 . . . 4.78 82.08 27 5.66 Yes 9 1.88 Yes 0 0 No -26 0.4 No 49 66.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59783252 - NM_032043 BRIP1 0 . . . 0.31 54.17 24 6.73 Yes 9 0.37 No 0 0 No -24 0.43 No 49 60.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68795462 + NM_004360 CDH1 0 . . . 0.2 0 15 6.16 Yes 60 -1.53 No 0 0 No -26 0.51 No 42 77.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131893964 + NM_005732 RAD50 0 . . . 0.09 72 13 5.29 No 29 0.57 No 0 0 No -49 0.58 No 47 64.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68878856 + NM_133509 RAD51B 0 . . . 6.61 74.33 35 5.73 Yes 37 0.53 No 0 0 No -34 0.65 No 50 79.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108227360 + NM_000051 ATM 0 . . . 0.48 0 18 5.11 No 24 0.82 Yes 0 0 No -30 0.41 No 34 42.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131977314 + NM_005732 RAD50 0 . . . 1.83 75.08 16 5.08 No 74 -5.39 No 0 0 No -20 0.78 Yes 47 81.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59930026 - NM_032043 BRIP1 0 . . . 7.2 88.22 27 4.5 No 28 1.45 Yes 0 0 No -26 0.88 Yes 30 87.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68877920 + NM_133509 RAD51B 0 . . . 3.55 77.74 31 5.37 No 45 1.17 Yes 0 0 No -30 0.93 Yes 41 62.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190654318 + NM_000534 PMS1 0 . . . 5.78 72.89 10 4 No 10 0.6 No 0 0 No -40 0.53 No 47 74.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68374649 + NM_133509 RAD51B 0 . . . 5.37 79.81 21 6 Yes 38 1.14 Yes 0 0 No -20 0.64 No 48 84.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75511725 - NM_001040108 MLH3 0 . . . 3 0 18 5.66 Yes 75 0.79 Yes 0 0 No -32 0.68 Yes 45 47.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68387080 + NM_133509 RAD51B 0 . . . 2.47 81.16 26 4.61 No 42 1.98 Yes 0 0 No -26 0.77 Yes 40 50.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21991813 - NM_000077 CDKN2A 0 . . . 2.31 73.66 51 5.82 Yes 39 0.4 No 0 0 No -26 0.41 No 48 96.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68773845 + NM_004360 CDH1 0 . . . 2.36 71.14 28 5.83 Yes 6 0.84 Yes 0 0 No -15 0.3 No 49 65.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68318607 + NM_133509 RAD51B 0 . . . 0.23 57.06 25 4.9 No 27 -2.54 No 0 0 No -24 0.95 Yes 22 85.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190653230 + NM_000534 PMS1 0 . . . 2.52 67.56 31 4.8 No 7 0.34 No 0 0 No -25 0.61 No 51 68.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89636907 + NM_000314 PTEN 0 . . . 1.84 60.13 37 6 Yes 34 -2.35 No 0 0 No -36 0.38 No 54 30.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402900 + NM_133509 RAD51B 0 . . . 2.42 66.64 20 4.89 No 22 -3.26 No 0 0 No -23 0.5 No 45 91.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41231932 - NM_007294 BRCA1 0 . . . 0.12 63.8 40 5.37 No 0 0.27 No 0 0 No -21 0.2 No 46 73.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68859962 + NM_004360 CDH1 0 . . . 3.95 73.76 24 5 No 65 0.94 Yes 0 0 No -23 0.73 Yes 50 78.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94189995 - NM_005591 MRE11 0 . . . 5.11 88.04 28 5.54 No 74 -4.24 No 0 0 No -27 0.94 Yes 50 62.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94210472 - NM_005591 MRE11 0 . . . 0.31 0 14 5.1 No 75 1.53 Yes 0 0 No -19 0.68 Yes 52 69.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108157735 + NM_000051 ATM 0 . . . 1.37 75.25 33 8.53 Yes 72 0.9 Yes 0 0 No -32 0.73 Yes 32 91.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68419965 + NM_133509 RAD51B 0 . . . 5.53 74.51 11 4.12 No 66 1.3 Yes 0 0 No -48 0.87 Yes 35 45.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68308904 + NM_133509 RAD51B 0 . . . 4.75 76.16 22 5.92 Yes 75 1.51 Yes 0 0 No -21 0.38 No 38 44.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68733335 + NM_133509 RAD51B 0 . . . 3.03 73.83 32 4.61 No 43 -3 No 0 0 No -23 0.49 No 47 75.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68691166 + NM_133509 RAD51B 0 . . . 0.06 77.93 23 4.99 No 28 1.17 Yes 0 0 No -22 0.55 No 30 88.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32927629 + NM_000059 BRCA2 0 . . . 5.18 75.32 15 3.85 No 50 0.12 No 0 0 No -23 0.47 No 47 83.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56768656 + NM_058216 RAD51C 0 . . . 11.96 84.82 24 4.77 No 12 0.72 No 0 0 No -24 0.38 No 46 91.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37066323 + NM_000249 MLH1 0 . . . 3.68 76.35 29 5.29 No 5 0.71 No 0 0 No -28 0.93 Yes 34 86.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108206332 + NM_000051 ATM 0 . . . 4.39 79.61 23 4.65 No 17 -1.14 No 0 0 No -22 0.79 Yes 45 87.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41262526 - NM_007294 BRCA1 0 . . . 8.52 81.88 33 5.44 No 9 1.03 Yes 0 0 No -26 0.94 Yes 49 94.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131942688 + NM_005732 RAD50 0 . . . 1.81 80.05 14 4.07 No 8 0.25 No 0 0 No -27 0.84 Yes 50 57.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108239685 + NM_000051 ATM 0 . . . 1.64 66.67 24 3.64 No 22 -3.62 No 0 0 No -23 0.63 No 48 52.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131940415 + NM_005732 RAD50 0 . . . 4.95 71.25 16 5.07 No 46 0.73 No 0 0 No -20 0.43 No 53 61.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68793852 + NM_004360 CDH1 0 . . . 2.98 72.56 20 4.68 No 41 1.07 Yes 0 0 No -24 0.49 No 44 45.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47687659 + NM_000251 MSH2 0 . . . 4.13 80.08 15 4.47 No 36 0.31 No 0 0 No -45 0.58 No 48 77.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89692465 + NM_000314 PTEN 0 . . . 5.12 73.05 40 5.55 No 8 0.76 No 0 0 No -18 0.59 No 50 84.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152351114 - NM_005431 XRCC2 0 . . . 1.55 79.69 21 5.57 Yes 7 1.02 Yes 0 0 No -20 0.6 No 51 82.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69071161 + NM_133509 RAD51B 0 . . . 7.65 76.59 13 4.76 No 20 1.43 Yes 0 0 No -23 0.61 No 48 80.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1211515 + NM_000455 STK11 0 . . . 8.98 83.3 31 5.56 Yes NA NA NA 0 0 No -24 0.64 No 43 57.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69037710 + NM_133509 RAD51B 0 . . . 3.81 73.23 17 4.35 No -2 0.9 Yes 0 0 No -16 0.89 Yes 51 31.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68488948 + NM_133509 RAD51B 0 . . . 1.68 79.78 35 6.16 Yes 13 0.7 No 0 0 No -34 0.95 Yes 45 76.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105176816 + NM_021930 RINT1 0 . . . 5.24 81.13 16 4.69 No 33 1.17 Yes 0 0 No -40 0.66 No 25 61.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84389357 - NM_139076 FAM175A 0 . . . 2.33 86.9 18 4.9 No 33 0.99 Yes 0 0 No -25 0.52 No 50 68.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68586655 + NM_133509 RAD51B 0 . . . 3 0 38 6.63 Yes 45 -3.16 No 0 0 No -37 0.95 Yes 54 45.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56790067 + NM_058216 RAD51C 0 . . . 3 77.35 11 4.12 No 62 1.21 Yes 0 0 No -35 0.6 No 47 83.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68545761 + NM_133509 RAD51B 0 . . . 4.57 78.25 33 6.69 Yes 13 -1.61 No 0 0 No -32 0.73 Yes 41 64.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90989696 - NM_002485 NBN 0 . . . 1.65 65.4 28 6.66 Yes 49 -4.57 No 0 0 No -27 0.78 Yes 47 65.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131910088 + NM_005732 RAD50 0 . . . 0.08 71.45 21 6.07 Yes 7 -2.44 No 0 0 No -20 0.76 Yes 30 72.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59933433 - NM_032043 BRIP1 0 . . . 0.15 73.19 15 5.48 No 50 0.42 No 0 0 No -27 0.77 Yes 41 79.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104180941 - NM_001100119 XRCC3 0 . . . 1.46 0 37 6.23 Yes 46 0.89 Yes 0 0 No -36 0.51 No 36 69.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41224305 - NM_007294 BRCA1 0 . . . 2.41 86.9 25 5.1 No 33 0.79 Yes 0 0 No -24 0.77 Yes 51 77.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37063375 + NM_000249 MLH1 0 . . . 2.01 71.32 27 5.54 No 0 0.52 No 0 0 No -23 0.54 No 46 41.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56805994 + NM_058216 RAD51C 0 . . . 0.75 70.74 17 6.78 Yes 58 0.9 Yes 0 0 No -16 0.62 No 55 37.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32964006 + NM_000059 BRCA2 0 . . . 8.1 90.39 34 7.69 Yes 29 1.11 Yes 0 0 No -33 0.76 Yes 47 83.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68838115 + NM_133509 RAD51B 0 . . . 2.74 68.39 18 4.45 No 48 0.64 No 0 0 No -17 0.79 Yes 42 68.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68599479 + NM_133509 RAD51B 0 . . . 9.59 91.98 14 5.33 No 62 0.87 Yes 0 0 No -26 0.45 No 50 71.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6020290 - NM_000535 PMS2 0 . . . 1.41 84.22 21 4.1 No 76 0.8 Yes 0 0 No -53 0.57 No 50 66.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190674632 + NM_000534 PMS1 0 . . . 4.66 80.51 42 6.54 Yes 50 0.74 No 0 0 No -26 0.44 No 46 67.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68528757 + NM_133509 RAD51B 0 . . . 3.25 76.22 52 7.25 Yes 32 0.58 No 0 0 No -36 0.75 Yes 35 52.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32906967 + NM_000059 BRCA2 0 . . . 5.47 71.19 36 6.35 Yes 20 0.14 No 0 0 No -35 0.67 Yes 38 83.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68944437 + NM_133509 RAD51B 0 . . . 3.56 62.66 24 5.46 No 34 1.56 Yes 0 0 No -23 0.91 Yes 41 59.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32919565 + NM_000059 BRCA2 0 . . . 3.74 63.63 36 5.59 Yes 42 0.52 No 0 0 No -25 0.62 No 41 76.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68563066 + NM_133509 RAD51B 0 . . . 5.15 70 25 4.1 No 16 0.3 No 0 0 No -46 0.75 Yes 42 94.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41015091 + NM_001164269 RAD51 0 . . . 6.11 81.12 25 6.62 Yes 38 0.02 No 0 0 No -25 0.64 No 40 80.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68974563 + NM_133509 RAD51B 0 . . . 0.96 0 23 4.72 No 13 0.43 No 0 0 No -20 0.65 No 42 84.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37073876 + NM_000249 MLH1 0 . . . 2.7 66.1 40 6.22 Yes 66 0.93 Yes 0 0 No -39 0.32 No 45 81.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104176431 - NM_001100119 XRCC3 0 . . . 7.43 75.57 18 4.12 No 71 0.66 No 0 0 No -28 0.77 Yes 42 84.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68304540 + NM_133509 RAD51B 0 . . . 2.12 0 20 4.69 No 62 0.35 No 0 0 No -42 0.82 Yes 16 47.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56786558 + NM_058216 RAD51C 0 . . . 0.05 84.22 19 5 No 60 1.46 Yes 0 0 No -45 0.62 No 50 79.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68953731 + NM_133509 RAD51B 0 . . . 4.27 70.41 36 7 Yes 43 0.37 No 0 0 No -35 0.87 Yes 51 68.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68443749 + NM_133509 RAD51B 0 . . . 2.71 76.12 32 5.55 No 47 -3.1 No 0 0 No -31 0.63 No 47 51.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68505715 + NM_133509 RAD51B 0 . . . 1.58 67.83 19 4.65 No 13 0.22 No 0 0 No -46 0.55 No 45 69.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59761557 - NM_032043 BRIP1 0 . . . 1.13 76.9 31 5.22 No 10 0.56 No 0 0 No -30 0.81 Yes 48 79.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47708184 + NM_000251 MSH2 0 . . . 7.6 89.77 34 5.25 No 42 0.54 No 0 0 No -25 0.78 Yes 43 86.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68650977 + NM_133509 RAD51B 0 . . . 0.43 0 51 6.47 Yes 51 -2.03 No 0 0 No -38 0.53 No 47 58.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32936204 + NM_000059 BRCA2 0 . . . 5.1 90.12 28 5.48 No 0 1.51 Yes 0 0 No -27 0.85 Yes 46 61.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32904321 + NM_000059 BRCA2 0 . . . 5.4 60.32 17 5.48 No 30 0.86 Yes 0 0 No -28 0.39 No 40 75.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56801249 + NM_058216 RAD51C 0 . . . 3.69 86.79 16 5.11 No 62 0.32 No 0 0 No -29 0.38 No 45 68.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56776579 + NM_058216 RAD51C 0 . . . 0.56 73.67 21 5.82 Yes 34 1.24 Yes 0 0 No -20 0.91 Yes 24 72.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190736823 + NM_000534 PMS1 0 . . . 2.13 78.11 18 4.71 No 76 1.15 Yes 0 0 No -23 0.7 Yes 53 36.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6033328 - NM_000535 PMS2 0 . . . 3.6 85.02 38 7.4 Yes 4 1.2 Yes 0 0 No -37 0.78 Yes 43 51.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59767304 - NM_032043 BRIP1 0 . . . 3.85 75.89 28 5.46 No 70 0.45 No 0 0 No -27 0.79 Yes 50 69.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68858580 + NM_133509 RAD51B 0 . . . 1.08 87.21 59 8.53 Yes 4 0.28 No 0 0 No -32 0.34 No 48 78.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1209280 + NM_000455 STK11 0 . . . 5.91 83.02 21 5.1 No 7 1.14 Yes 0 0 No -58 0.42 No 51 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68634698 + NM_133509 RAD51B 0 . . . 4.79 71.57 16 4.69 No 54 1 Yes 0 0 No -59 0.28 No 44 47.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215665757 - NM_000465 BARD1 0 . . . 9.54 83.74 17 5.57 Yes 64 0.8 Yes 0 0 No -24 0.72 Yes 50 68.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68841858 + NM_133509 RAD51B 0 . . . 0.99 65.82 29 6.32 Yes 15 0.06 No 0 0 No -28 0.78 Yes 43 94.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68404813 + NM_133509 RAD51B 0 . . . 4.74 0 24 3.29 No 67 1.09 Yes 0 0 No -32 0.46 No 49 75.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89728327 + NM_000314 PTEN 0 . . . 4.13 81.2 16 5.1 No 9 0.44 No 0 0 No -19 0.42 No 49 64.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21968956 - NM_000077 CDKN2A 0 . . . 1.71 75.7 15 5.1 No 71 -5.37 No 0 0 No -44 0.46 No 50 81.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68846723 + NM_133509 RAD51B 0 . . . 0.89 58.62 26 5.2 No 42 0 No 0 0 No -25 0.82 Yes 43 47.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68498971 + NM_133509 RAD51B 0 . . . 9.34 76.06 17 4.79 No 72 0.42 No 0 0 No -16 0.43 No 47 53.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68734657 + NM_133509 RAD51B 0 . . . 4.34 75.23 28 5.83 Yes 63 1.24 Yes 0 0 No -27 0.88 Yes 45 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7587675 - NM_000546 TP53 0 . . . 0.24 0 18 4.57 No 7 1.24 Yes 0 0 No -20 0.59 No 11 77.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68742996 + NM_133509 RAD51B 0 . . . 5.26 80.08 26 5.48 No 16 0.07 No 0 0 No -23 0.79 Yes 42 67.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68947734 + NM_133509 RAD51B 0 . . . 1.14 76.77 29 5.31 No 39 1.19 Yes 0 0 No -27 0.4 No 49 61.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68877224 + NM_133509 RAD51B 0 . . . 7.62 77.83 10 6 Yes 12 0.58 No 0 0 No -29 0.74 Yes 46 77.08 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21972984 - NM_000077 CDKN2A 0 . . . 3.27 0 18 5.97 Yes 42 0.77 Yes 0 0 No -17 0.52 No 45 66.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59941748 - NM_032043 BRIP1 0 . . . 1.54 74.19 31 5.74 Yes 15 0.34 No 0 0 No -26 0.39 No 48 73.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190662521 + NM_000534 PMS1 0 . . . 7.07 78.47 23 6 Yes 4 0.49 No 0 0 No -22 0.86 Yes 47 59.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69028040 + NM_133509 RAD51B 0 . . . 1.2 65.4 19 5.72 Yes 4 2.16 Yes 0 0 No -18 0.55 No 34 65.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68745729 + NM_133509 RAD51B 0 . . . 8.37 84.43 12 5.2 No 37 1.21 Yes 0 0 No -26 0.35 No 29 66.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68960641 + NM_133509 RAD51B 0 . . . 5.91 83.74 23 5.39 No 68 0.28 No 0 0 No -22 0.62 No 53 51.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41237442 - NM_007294 BRCA1 0 . . . 0.86 62.63 29 4 No 0 0.46 No 0 0 No -28 0.52 No 42 52.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215591013 - NM_000465 BARD1 0 . . . 12.45 90.85 16 5.45 No 12 1.36 Yes 0 0 No -15 0.51 No 43 59.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68289832 + NM_133509 RAD51B 0 . . . 6.56 83.6 25 4.07 No 69 -4.76 No 0 0 No -25 0.66 Yes 45 92.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68797285 + NM_133509 RAD51B 0 . . . 7.86 74.93 22 5.31 No 65 -3.01 No 0 0 No -27 0.74 Yes 49 48.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94192987 - NM_005591 MRE11 0 . . . 4.98 74.71 36 5.11 No 10 0.57 No 0 0 No -25 0.85 Yes 48 65.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75519176 - NM_001040108 MLH3 0 . . . 5.01 76.17 20 5.1 No 59 -4.4 No 0 0 No -19 0.5 No 43 59.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68322140 + NM_133509 RAD51B 0 . . . 4.02 80.12 69 7.3 Yes 15 1.43 Yes 0 0 No -39 0.54 No 43 95.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32947529 + NM_000059 BRCA2 0 . . . 1.2 77.18 16 5.06 No 53 0.63 No 0 0 No -24 0.34 No 52 64.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68421219 + NM_133509 RAD51B 0 . . . 5.19 80.94 15 6.88 Yes 67 -4.41 No 0 0 No -18 0.61 No 46 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94156329 - NM_005591 MRE11 0 . . . 6.29 80.07 29 7.68 Yes 1 0.58 No 0 0 No -28 0.93 Yes 40 72.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56775118 + NM_058216 RAD51C 0 . . . 4.82 92.89 19 4.58 No 41 0.68 No 0 0 No -21 0.52 No 17 59.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108128958 + NM_000051 ATM 0 . . . 2.39 70.9 25 5.02 No 11 -2.17 No 0 0 No -23 0.27 No 40 60.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68663300 + NM_133509 RAD51B 0 . . . 1.6 75.75 20 6.22 Yes 66 0.8 Yes 0 0 No -27 0.64 No 30 49.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131958601 + NM_005732 RAD50 0 . . . 3.51 73.93 27 5.48 No 74 1.57 Yes 0 0 No -26 0.63 No 54 41.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23644432 - NM_024675 PALB2 0 . . . 0.41 76.57 22 4.89 No 17 0.5 No 0 0 No -21 0.76 Yes 41 79.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190673657 + NM_000534 PMS1 0 . . . 8.59 77.43 20 4.78 No 40 0.98 Yes 0 0 No -19 0.55 No 45 81.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59937499 - NM_032043 BRIP1 0 . . . 4.32 78.13 18 4.84 No 39 1.04 Yes 0 0 No -17 0.74 Yes 47 63.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41249092 - NM_007294 BRCA1 0 . . . 3.02 71.75 31 6.83 Yes 64 0.94 Yes 0 0 No -29 0.71 Yes 43 44.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68699037 + NM_133509 RAD51B 0 . . . 2.15 72.15 36 5.67 Yes 74 -6.36 No 0 0 No -25 0.74 Yes 48 25.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68763955 + NM_133509 RAD51B 0 . . . 0.58 68.99 31 6.63 Yes 62 -4.79 No 0 0 No -30 0.72 Yes 47 81.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68843148 + NM_004360 CDH1 0 . . . 2.69 84.41 79 8.83 Yes 24 -1.14 No 0 0 No -25 0.75 Yes 44 49.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89705607 + NM_000314 PTEN 0 . . . 3.17 69.55 19 4.47 No 60 -2.74 No 0 0 No -37 0.38 No 51 46.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33432003 - NM_002878 RAD51D 0 . . . 2.42 0 23 6.24 Yes -1 0.1 No 0 0 No -24 0.49 No 37 63.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47771182 + NM_000251 MSH2 0 . . . 5.1 70.62 22 4.55 No 71 -2.14 No 0 0 No -21 0.89 Yes 32 61.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68425721 + NM_133509 RAD51B 0 . . . 0.05 0 17 4.56 No 57 1.28 Yes 0 0 No -20 0.73 Yes 35 80.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90961861 - NM_002485 NBN 0 . . . 3.09 0 15 4.46 No 61 0.83 Yes 0 0 No -28 0.61 No 47 75.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59915084 - NM_032043 BRIP1 0 . . . 0.18 60.47 16 3.75 No 19 0.35 No 0 0 No -47 0.64 No 36 56.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68519218 + NM_133509 RAD51B 0 . . . 4.39 76.47 14 5.12 No 2 0.61 No 0 0 No -21 0.25 No 50 56.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190664174 + NM_000534 PMS1 0 . . . 5 74.89 17 5.49 No 2 1.27 Yes 0 0 No -26 0.69 Yes 45 40.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68749244 + NM_133509 RAD51B 0 . . . 3.56 76.88 22 4.96 No 4 1.04 Yes 0 0 No -22 0.61 No 37 56.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68400753 + NM_133509 RAD51B 0 . . . 0.98 0 29 5.55 No 3 0.48 No 0 0 No -27 0.5 No 55 50.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68750297 + NM_133509 RAD51B 0 . . . 7.02 89.37 27 5.12 No 15 0 No 0 0 No -26 0.61 No 43 78.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68748687 + NM_133509 RAD51B 0 . . . 7.04 83.67 33 3.52 No 4 0.82 Yes 0 0 No -32 0.6 No 47 92.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68775650 + NM_133509 RAD51B 0 . . . 5.94 80.77 22 6.16 Yes 65 0.28 No 0 0 No -19 0.73 Yes 44 41.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47777623 + NM_000251 MSH2 0 . . . 2.43 65.88 17 4.86 No 26 0.63 No 0 0 No -22 0.52 No 47 52.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90954931 - NM_002485 NBN 0 . . . 4.87 71.27 27 5.2 No 76 1.09 Yes 0 0 No -26 0.5 No 27 89.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41216097 - NM_007294 BRCA1 0 . . . 9.01 84.48 23 5.74 Yes 1 1.34 Yes 0 0 No -22 0.88 Yes 49 89.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56769206 + NM_058216 RAD51C 0 . . . 0.38 66.84 18 4.3 No 63 1.36 Yes 0 0 No -21 0.35 No 46 48.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68811413 + NM_004360 CDH1 0 . . . 0.29 62.41 38 6.08 Yes 55 1.27 Yes 0 0 No -32 0.53 No 45 48.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94218627 - NM_005591 MRE11 0 . . . 2.69 70.29 26 5.29 No 47 0.26 No 0 0 No -25 0.8 Yes 55 63.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68813244 + NM_133509 RAD51B 0 . . . 3.81 0 17 6.76 Yes 2 0.53 No 0 0 No -28 0.65 No 27 79.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6033487 - NM_000535 PMS2 0 . . . 3.01 0 17 4.8 No 42 1.29 Yes 0 0 No -16 0.44 No 32 74.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68917654 + NM_133509 RAD51B 0 . . . 0.72 65.64 31 5.43 No 25 0.66 No 0 0 No -23 0.57 No 43 55.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190647723 + NM_000534 PMS1 0 . . . 0.07 70.46 35 6.59 Yes 50 -4.57 No 0 0 No -28 0.55 No 46 60.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45798278 - NM_001048171 MUTYH 0 . . . 1.94 63.58 34 5.63 Yes 72 -3.72 No 0 0 No -26 0.82 Yes 37 52.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94160469 - NM_005591 MRE11 0 . . . 7.48 73.66 37 7.39 Yes 49 0.07 No 0 0 No -32 0.41 No 41 84.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48021000 + NM_000179 MSH6 0 . . . 3.41 68.64 24 6.47 Yes 45 0.99 Yes 0 0 No -23 0.49 No 39 51.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6031783 - NM_000535 PMS2 0 . . . 1.38 74.62 21 3.52 No 70 0.58 No 0 0 No -24 0.66 No 49 30.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45804779 - NM_001048171 MUTYH 0 . . . 1.71 0 27 5.69 Yes 10 0.92 Yes 0 0 No -26 0.8 Yes 48 88.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52441561 - NM_004656 BAP1 0 . . . 3.49 79.46 24 5.74 Yes 33 -1.32 No 0 0 No -29 0.71 Yes 26 73.9 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68470158 + NM_133509 RAD51B 0 . . . 3.71 79.19 35 6.08 Yes 41 0.91 Yes 0 0 No -34 0.54 No 51 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48019104 + NM_000179 MSH6 0 . . . 4 85.87 35 5.36 No 33 0.93 Yes 0 0 No -27 0.32 No 50 69.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41261008 - NM_007294 BRCA1 0 . . . 4.16 83.32 16 5.29 No NA NA NA 0 0 No -15 0.33 No 31 87.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89637874 + NM_000314 PTEN 0 . . . 1.28 84.17 22 5.29 No 32 0.51 No 0 0 No -21 0.82 Yes 26 39.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68317634 + NM_133509 RAD51B 0 . . . 3.05 0 17 6.93 Yes 48 0.8 Yes 0 0 No -27 0.49 No 57 43.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29135011 - NM_001005735 CHEK2 0 . . . 2.95 70.85 20 7.87 Yes 23 1.58 Yes 0 0 No -19 0.64 No 49 70.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90988976 - NM_002485 NBN 0 . . . 1.05 0 39 6.45 Yes 25 0.01 No 0 0 No -34 0.49 No 17 43.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84395698 - NM_139076 FAM175A 0 . . . 4.02 80.12 19 8.71 Yes 10 1.24 Yes 0 0 No -30 0.59 No 48 90.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89667629 + NM_000314 PTEN 0 . . . 3.61 71.65 17 4.8 No 34 1.22 Yes 0 0 No -16 0.41 No 41 74.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131921133 + NM_005732 RAD50 0 . . . 7.65 81.15 30 6.7 Yes 36 0.67 No 0 0 No -30 0.65 No 45 79.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190711706 + NM_000534 PMS1 0 . . . 1.27 84.22 11 4.12 No 29 1.24 Yes 0 0 No -28 0.65 No 50 59.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6028217 - NM_000535 PMS2 0 . . . 1.16 0 22 4.9 No 13 1.11 Yes 0 0 No -19 0.44 No 45 59.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68965144 + NM_133509 RAD51B 0 . . . 2.42 0 32 4.97 No 4 0.65 No 0 0 No -31 0.36 No 48 76.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190701117 + NM_000534 PMS1 0 . . . 6.31 73.26 17 5.2 No 50 -2.46 No 0 0 No -23 0.38 No 38 55.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56806080 + NM_058216 RAD51C 0 . . . 1.2 57.73 41 7.77 Yes 76 0.54 No 0 0 No -32 0.41 No 56 28.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68788914 + NM_133509 RAD51B 0 . . . 1.58 68.92 36 4.49 No 19 0.65 No 0 0 No -25 0.85 Yes 39 62.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68733454 + NM_133509 RAD51B 0 . . . 1.44 75.61 43 5.1 No 3 1.96 Yes 0 0 No -24 0.62 No 42 42.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108130943 + NM_000051 ATM 0 . . . 3.6 85.02 30 4.73 No 4 1.2 Yes 0 0 No -29 0.68 Yes 45 55.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59754945 - NM_032043 BRIP1 0 . . . 3.74 83.73 21 4.73 No 49 1 Yes 0 0 No -20 0.39 No 37 71.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68933358 + NM_133509 RAD51B 0 . . . 1.63 67.52 34 6.31 Yes 57 1.39 Yes 0 0 No -21 0.47 No 32 70.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48032580 + NM_000179 MSH6 0 . . . 2.99 68.34 17 5.29 No 23 1.59 Yes 0 0 No -16 0.42 No 40 74.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68700014 + NM_133509 RAD51B 0 . . . 3.45 78.79 20 5.1 No 2 1.28 Yes 0 0 No -27 0.59 No 44 68.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94209210 - NM_005591 MRE11 0 . . . 2.72 61.91 19 4.12 No 57 0.04 No 0 0 No -31 0.67 Yes 41 38.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75479878 - NM_001040108 MLH3 0 . . . 1.82 0 30 5.38 No 5 0.71 No 0 0 No -22 0.44 No 53 74.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59776207 - NM_032043 BRIP1 0 . . . 1.97 74.47 16 4.24 No 63 0.43 No 0 0 No -29 0.61 No 52 65.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68590648 + NM_133509 RAD51B 0 . . . 0.26 62.61 21 5.2 No 60 -3.18 No 0 0 No -25 0.52 No 37 94.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69025417 + NM_133509 RAD51B 0 . . . 7.6 80.81 20 4.8 No 27 1.03 Yes 0 0 No -19 0.88 Yes 31 84.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56777402 + NM_058216 RAD51C 0 . . . 2.24 80.12 57 7.45 Yes 67 1.89 Yes 0 0 No -22 0.55 No 51 80.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69025625 + NM_133509 RAD51B 0 . . . 8.59 78.56 21 5.18 No 47 -2.2 No 0 0 No -20 0.51 No 43 62.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90988963 - NM_002485 NBN 0 . . . 6.54 76.35 17 5.54 No -4 1.41 Yes 0 0 No -28 0.49 No 48 58.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6020602 - NM_000535 PMS2 0 . . . 2.57 66.05 20 5.07 No -1 0.55 No 0 0 No -23 0.75 Yes 40 49.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59800030 - NM_032043 BRIP1 0 . . . 4.8 76.09 16 5.66 Yes 41 0.79 Yes 0 0 No -25 0.36 No 47 59.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104177697 - NM_001100119 XRCC3 0 . . . 1.77 68.88 19 4.69 No -1 -1.08 No 0 0 No -61 0.43 No 33 65.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69132827 + NM_133509 RAD51B 0 . . . 0.52 68.61 28 5.83 Yes 74 1.62 Yes 0 0 No -27 0.93 Yes 38 57.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59911643 - NM_032043 BRIP1 0 . . . 3.29 79.24 10 4 No 43 -1.77 No 0 0 No -24 0.54 No 41 71.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68767111 + NM_133509 RAD51B 0 . . . 7.39 87.19 34 5.47 No 11 1.28 Yes 0 0 No -26 0.53 No 47 96.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108092808 + NM_000051 ATM 0 . . . 0.86 74.78 31 4.21 No 59 0.33 No 0 0 No -31 0.54 No 46 27.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68508859 + NM_133509 RAD51B 0 . . . 7.02 93.67 26 5.29 No 28 0.51 No 0 0 No -25 0.7 Yes 38 93.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68465678 + NM_133509 RAD51B 0 . . . 4.53 80.49 36 7.5 Yes 19 1.21 Yes 0 0 No -35 0.61 No 52 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68752818 + NM_133509 RAD51B 0 . . . 0.69 68 27 5.2 No 57 1.25 Yes 0 0 No -55 0.47 No 35 82.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84397796 - NM_139076 FAM175A 0 . . . 3 0 17 4.34 No 43 0.49 No 0 0 No -46 0.61 No 39 60.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131915812 + NM_005732 RAD50 0 . . . 3.29 81.68 17 5.57 Yes 39 0.84 Yes 0 0 No -16 0.74 Yes 40 80.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1212867 + NM_000455 STK11 0 . . . 9.04 87.72 18 4.88 No 74 0.96 Yes 0 0 No -17 0.3 No 46 83.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32945215 + NM_000059 BRCA2 0 . . . 4.1 76.07 24 3.32 No -4 0.24 No 0 0 No -24 0.87 Yes 47 39.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108238158 + NM_000051 ATM 0 . . . 1.95 0 21 4.8 No 10 -1.86 No 0 0 No -20 0.88 Yes 12 68.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68663999 + NM_133509 RAD51B 0 . . . 1.59 65.35 40 5.59 Yes 40 1.1 Yes 0 0 No -29 0.36 No 32 73.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56782052 + NM_058216 RAD51C 0 . . . 3.62 68.12 34 6.28 Yes 74 1.23 Yes 0 0 No -29 0.81 Yes 32 65.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190669191 + NM_000534 PMS1 0 . . . 3.38 68.6 33 6.24 Yes 33 0.22 No 0 0 No -32 0.75 Yes 25 54.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68866182 + NM_133509 RAD51B 0 . . . 1.89 72.26 37 6.85 Yes 31 1.05 Yes 0 0 No -36 0.76 Yes 48 45.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68821847 + NM_004360 CDH1 0 . . . 0.78 84.22 20 4.53 No 33 1.45 Yes 0 0 No -19 0.43 No 50 44.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29090662 - NM_001005735 CHEK2 0 . . . 3.75 65.74 24 4.33 No 23 0.58 No 0 0 No -46 0.79 Yes 35 75.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68742224 + NM_133509 RAD51B 0 . . . 9.94 84.62 24 4.73 No 5 1.08 Yes 0 0 No -23 0.74 Yes 50 66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215599656 - NM_000465 BARD1 0 . . . 4.47 68.28 33 5.99 Yes 43 1.63 Yes 0 0 No -23 0.51 No 45 82.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23647475 - NM_024675 PALB2 0 . . . 7.17 93.17 28 5.57 Yes 67 1.05 Yes 0 0 No -27 0.78 Yes 47 81.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89645661 + NM_000314 PTEN 0 . . . 3.32 73.09 38 7.38 Yes 64 0.15 No 0 0 No -37 0.34 No 51 53.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68881880 + NM_133509 RAD51B 0 . . . 1.89 74.27 21 5.09 No 17 0.07 No 0 0 No -23 0.29 No 41 94.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6033654 - NM_000535 PMS2 0 . . . 6.42 76.73 46 6.27 Yes 35 0.14 No 0 0 No -23 0.4 No 48 56.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1205650 + NM_000455 STK11 0 . . . 0.3 71.96 14 5.99 Yes NA NA NA 0 0 No -25 0.45 No 20 22.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59866099 - NM_032043 BRIP1 0 . . . 5.06 82.31 15 4.99 No 59 0.53 No 0 0 No -22 0.6 No 55 56.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68780496 + NM_004360 CDH1 0 . . . 2.74 75.37 20 4.06 No 66 -5.19 No 0 0 No -26 0.26 No 56 47.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6042401 - NM_000535 PMS2 0 . . . 5.74 70.77 17 5.47 No 42 1.48 Yes 0 0 No -23 0.9 Yes 40 68.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215654242 - NM_000465 BARD1 0 . . . 6.73 84.95 28 7.68 Yes 51 0.68 No 0 0 No -27 0.9 Yes 48 40.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68794441 + NM_004360 CDH1 0 . . . 8.94 89.76 16 6.32 Yes 49 1.6 Yes 0 0 No -23 0.59 No 44 60.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105186139 + NM_021930 RINT1 0 . . . 1.97 60.23 26 5 No 3 0.18 No 0 0 No -25 0.84 Yes 44 53.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29137819 - NM_001005735 CHEK2 0 . . . 4.54 92.87 25 7.35 Yes 70 1.64 Yes 0 0 No -24 0.95 Yes 48 80.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1210913 + NM_000455 STK11 0 . . . 0.09 74.68 17 4.8 No 4 0.41 No 0 0 No -24 0.83 Yes 54 86.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68607815 + NM_133509 RAD51B 0 . . . 1.74 68.01 16 4.96 No 8 0.9 Yes 0 0 No -33 0.54 No 42 63.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131949078 + NM_005732 RAD50 0 . . . 2.3 69.91 13 4.79 No 73 -6.02 No 0 0 No -20 0.76 Yes 47 44.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68595098 + NM_133509 RAD51B 0 . . . 0.72 70.68 25 4.99 No 70 -2.8 No 0 0 No -43 0.82 Yes 32 56.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68465543 + NM_133509 RAD51B 0 . . . 0.45 63.08 15 4.57 No 53 0.37 No 0 0 No -42 0.43 No 46 89.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75484471 - NM_001040108 MLH3 0 . . . 4.22 66.6 37 7.07 Yes 64 2.33 Yes 0 0 No -36 0.75 Yes 50 80.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68708011 + NM_133509 RAD51B 0 . . . 0.09 74.68 29 7.27 Yes 4 0.41 No 0 0 No -28 0.83 Yes 54 80.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68431153 + NM_133509 RAD51B 0 . . . 0.14 0 18 4.9 No 52 -3.77 No 0 0 No -29 0.47 No 43 65.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41011357 + NM_001164269 RAD51 0 . . . 2.71 66.46 31 5.66 Yes 16 0.19 No 0 0 No -25 0.66 No 47 66.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69067755 + NM_133509 RAD51B 0 . . . 6.59 85.19 20 4.79 No 36 0.65 No 0 0 No -19 0.81 Yes 38 84.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69011662 + NM_133509 RAD51B 0 . . . 5.17 73.04 17 4 No 5 -1.13 No 0 0 No -24 0.52 No 37 90.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68889526 + NM_133509 RAD51B 0 . . . 2.88 80.56 32 5.87 Yes 22 1.06 Yes 0 0 No -23 0.75 Yes 50 47.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47693340 + NM_000251 MSH2 0 . . . 1.27 0 20 4.4 No 47 0.27 No 0 0 No -19 0.82 Yes 45 42.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131949340 + NM_005732 RAD50 0 . . . 6.66 87.34 27 8.01 Yes 66 1.24 Yes 0 0 No -26 0.64 No 12 46.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89715962 + NM_000314 PTEN 0 . . . 4.56 79.53 24 4.35 No 36 0.46 No 0 0 No -23 0.61 No 46 57.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68296509 + NM_133509 RAD51B 0 . . . 0.78 0 16 5.53 No 48 -2.39 No 0 0 No -31 0.48 No 45 73.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68321798 + NM_133509 RAD51B 0 . . . 2.88 85.02 26 5.42 No 49 -2.67 No 0 0 No -25 0.72 Yes 51 66.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59930762 - NM_032043 BRIP1 0 . . . 3.35 67.53 39 4.46 No 76 0.44 No 0 0 No -29 0.59 No 33 48.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69023106 + NM_133509 RAD51B 0 . . . 5.91 75.38 22 5.2 No 37 0.7 No 0 0 No -21 0.65 No 49 80.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59852905 - NM_032043 BRIP1 0 . . . 0.99 65.91 30 3.14 No 74 0.58 No 0 0 No -29 0.54 No 43 70.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68900020 + NM_133509 RAD51B 0 . . . 7.55 76.59 17 4.9 No 73 0.33 No 0 0 No -23 0.93 Yes 49 54.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68830969 + NM_133509 RAD51B 0 . . . 3.75 73.61 22 6.71 Yes 42 2.38 Yes 0 0 No -32 0.6 No 16 84.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23633365 - NM_024675 PALB2 0 . . . 5.94 77.91 31 6.63 Yes 69 0.63 No 0 0 No -30 0.97 Yes 48 91.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69052694 + NM_133509 RAD51B 0 . . . 6.68 85.64 28 5.39 No 37 1.08 Yes 0 0 No -27 0.73 Yes 21 49.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47675673 + NM_000251 MSH2 0 . . . 8.35 83.04 32 7.87 Yes 53 0.05 No 0 0 No -31 0.73 Yes 46 83.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68881412 + NM_133509 RAD51B 0 . . . 1.63 0 25 6.7 Yes 44 1.58 Yes 0 0 No -25 0.59 No 44 68.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152345644 - NM_005431 XRCC2 0 . . . 7.23 89.36 31 6.47 Yes 26 0.29 No 0 0 No -30 0.76 Yes 43 72.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7563253 - NM_000546 TP53 0 . . . 1.77 74.23 21 5.2 No 61 1.18 Yes 0 0 No -20 0.71 Yes 46 57.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108097722 + NM_000051 ATM 0 . . . 7.89 89.94 22 5.29 No 63 1.02 Yes 0 0 No -24 0.51 No 40 80.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68490372 + NM_133509 RAD51B 0 . . . 0.29 74.94 45 7.14 Yes 20 1.89 Yes 0 0 No -30 0.56 No 38 95.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41213059 - NM_007294 BRCA1 0 . . . 3.34 68.95 40 7.07 Yes 16 1.03 Yes 0 0 No -39 0.32 No 42 95.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89628930 + NM_000314 PTEN 0 . . . 4.91 72.23 38 6.2 Yes 31 -2.99 No 0 0 No -37 0.38 No 41 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68297394 + NM_133509 RAD51B 0 . . . 2.67 76.14 24 4.74 No 32 0.53 No 0 0 No -30 0.57 No 44 45.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68734638 + NM_133509 RAD51B 0 . . . 7.25 85.72 32 5.74 Yes 44 1.25 Yes 0 0 No -28 0.42 No 44 82.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68409674 + NM_133509 RAD51B 0 . . . 6.55 86.5 10 3.17 No 74 0.24 No 0 0 No -32 0.63 No 39 77.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89695874 + NM_000314 PTEN 0 . . . 2.65 72.63 30 5.83 Yes 28 0.52 No 0 0 No -29 0.88 Yes 51 74.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59778887 - NM_032043 BRIP1 0 . . . 3.16 79.77 21 6.48 Yes 18 1.26 Yes 0 0 No -24 0.32 No 40 65.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108236242 + NM_000051 ATM 0 . . . 3.04 74.71 60 9.37 Yes 31 0.8 Yes 0 0 No -26 0.44 No 48 44.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68861107 + NM_133509 RAD51B 0 . . . 3.38 67.89 34 4.42 No 21 -1.79 No 0 0 No -22 0.54 No 48 69.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21979149 - NM_000077 CDKN2A 0 . . . 6.1 76.77 33 7.05 Yes 27 1.27 Yes 0 0 No -32 0.32 No 31 78.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105207730 + NM_021930 RINT1 0 . . . 0.87 76.64 16 5.05 No 7 0.18 No 0 0 No -28 0.42 No 51 73.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68898166 + NM_133509 RAD51B 0 . . . 1.75 0 22 4.95 No 18 0 No 0 0 No -27 0.69 Yes 29 28.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105196157 + NM_021930 RINT1 0 . . . 3.12 72.93 15 4.58 No 27 0.48 No 0 0 No -55 0.53 No 39 61.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68936863 + NM_133509 RAD51B 0 . . . 0.76 0 13 4.36 No 6 0.67 No 0 0 No -26 0.44 No 52 81.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190688372 + NM_000534 PMS1 0 . . . 0.31 61.53 17 5.83 Yes 43 -3.2 No 0 0 No -27 0.45 No 30 54.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104173111 - NM_001100119 XRCC3 0 . . . 2.02 74.22 18 4.51 No 43 -2.67 No 0 0 No -22 0.91 Yes 31 45.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131928426 + NM_005732 RAD50 0 . . . 1.12 66.16 19 4.8 No 47 1.63 Yes 31 0.69 Yes -26 0.62 No 44 56.3 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr13 32939750 + NM_000059 BRCA2 0 . . . 7.72 82.38 14 4.32 No 1 1.04 Yes 0 0 No -21 0.54 No 57 48.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68332357 + NM_133509 RAD51B 0 . . . 3.06 66.46 25 5.57 Yes 16 0.95 Yes 0 0 No -24 0.74 Yes 42 86.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6027488 - NM_000535 PMS2 0 . . . 1.56 0 9 3.87 No 38 1.17 Yes 0 0 No -25 0.47 No 20 37.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90994530 - NM_002485 NBN 0 . . . 3.26 77.35 18 4.74 No 68 1.32 Yes 0 0 No -25 0.59 No 51 49.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68832350 + NM_004360 CDH1 0 . . . 0 0 18 7.14 Yes 32 0.41 No 0 0 No -28 0.46 No 26 55.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29124257 - NM_001005735 CHEK2 0 . . . 8.05 92.11 21 5.13 No 9 0.45 No 0 0 No -20 0.4 No 35 70.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32893435 + NM_000059 BRCA2 0 . . . 1.67 70.49 16 4.95 No 19 1.87 Yes 0 0 No -24 0.69 Yes 39 89.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131937519 + NM_005732 RAD50 0 . . . 8.65 91.7 12 5.09 No 1 0.49 No 0 0 No -36 0.39 No 44 39.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152373678 - NM_005431 XRCC2 0 . . . 1.85 64.41 19 5.15 No 11 1.12 Yes 0 0 No -29 0.29 No 43 56.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68581211 + NM_133509 RAD51B 0 . . . 6.18 80.89 30 3.9 No 50 0.71 No 0 0 No -21 0.46 No 44 78.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215656799 - NM_000465 BARD1 0 . . . 1.65 77.34 17 5.81 Yes 52 0.72 No 0 0 No -28 0.64 No 49 83.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68773284 + NM_133509 RAD51B 0 . . . 0.84 72.4 39 5.85 Yes 70 -5.94 No 0 0 No -38 0.52 No 44 76.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68771159 + NM_133509 RAD51B 0 . . . 3.77 74.4 17 5.15 No 68 -2 No 0 0 No -20 0.51 No 49 53.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108169349 + NM_000051 ATM 0 . . . 4.71 76.13 20 4.79 No 5 1.14 Yes 0 0 No -22 0.51 No 38 78.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47687128 + NM_000251 MSH2 0 . . . 6.97 80.45 24 3.84 No 8 1.49 Yes 0 0 No -23 0.78 Yes 49 60.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47694626 + NM_000251 MSH2 0 . . . 3.19 81.49 19 7.07 Yes 14 0.74 No 0 0 No -18 0.6 No 22 78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32963428 + NM_000059 BRCA2 0 . . . 7.55 85.14 27 7.78 Yes 66 1 Yes 0 0 No -26 0.94 Yes 46 88.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105205382 + NM_021930 RINT1 0 . . . 2.21 71.84 32 6.46 Yes 69 -5.87 No 0 0 No -31 0.87 Yes 38 91.22 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37082507 + NM_000249 MLH1 0 . . . 2.39 72.17 23 6.08 Yes 4 0.42 No 0 0 No -32 0.47 No 48 47.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6045872 - NM_000535 PMS2 0 . . . 0.89 70.91 23 5.27 No 25 -2.93 No 0 0 No -22 0.87 Yes 49 69.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40996770 + NM_001164269 RAD51 0 . . . 1.96 74.26 41 8.52 Yes 19 -3.37 No 0 0 No -49 0.49 No 42 46.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6031305 - NM_000535 PMS2 0 . . . 5.2 85.02 44 6.66 Yes 58 1.9 Yes 0 0 No -13 0.28 No 53 75.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90963439 - NM_002485 NBN 0 . . . 4.7 84.22 43 7 Yes 33 1.44 Yes 0 0 No -42 0.76 Yes 50 87.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47680169 + NM_000251 MSH2 0 . . . 6.87 82.89 12 4.24 No 19 0.04 No 0 0 No -41 0.41 No 39 83.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47667694 + NM_000251 MSH2 0 . . . 1.95 82.35 26 5.35 No 11 1.66 Yes 0 0 No -25 0.82 Yes 47 78.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68868127 + NM_133509 RAD51B 0 . . . 3.63 70.63 43 6.63 Yes 53 0.69 No 0 0 No -25 0.86 Yes 49 68.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32957862 + NM_000059 BRCA2 0 . . . 1.1 67.65 19 7 Yes 55 -5.33 No 0 0 No -18 0.7 Yes 59 35.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68829634 + NM_133509 RAD51B 0 . . . 8.59 81.75 23 5.38 No 2 1.44 Yes 0 0 No -22 0.54 No 45 83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68955351 + NM_133509 RAD51B 0 . . . 2.14 61.75 18 4.9 No 56 1.11 Yes 0 0 No -47 0.83 Yes 53 53.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32923443 + NM_000059 BRCA2 0 . . . 1.06 61.75 20 5.18 No 34 1.07 Yes 0 0 No -55 0.79 Yes 24 96.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89721599 + NM_000314 PTEN 0 . . . 2 76.05 33 5.99 Yes 46 2.12 Yes 0 0 No -29 0.84 Yes 45 72.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90973391 - NM_002485 NBN 0 . . . 5.11 73.63 34 5.62 Yes 4 1.35 Yes 0 0 No -29 0.73 Yes 49 66.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94228328 - NM_005591 MRE11 0 . . . 4.09 70.17 26 6.24 Yes 58 1.06 Yes 0 0 No -20 0.59 No 44 60.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69105064 + NM_133509 RAD51B 0 . . . 1.31 69.01 21 5.2 No 1 1.12 Yes 0 0 No -20 0.38 No 51 42.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32942997 + NM_000059 BRCA2 0 . . . 1.2 0 28 6.12 Yes 19 -1.53 No 0 0 No -27 0.63 No 41 21.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59760536 - NM_032043 BRIP1 0 . . . 4.38 89.39 17 4.54 No 24 0.1 No 0 0 No -20 0.5 No 40 73.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32959417 + NM_000059 BRCA2 0 . . . 6.87 77.6 38 5.96 Yes 59 0.71 No 0 0 No -22 0.69 Yes 42 82.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37036485 + NM_000249 MLH1 0 . . . 1.87 80.12 32 6.78 Yes 6 1.13 Yes 0 0 No -31 0.65 No 52 71.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68755475 + NM_133509 RAD51B 0 . . . 7.39 77.13 14 4.11 No 27 0.35 No 0 0 No -21 0.83 Yes 46 49.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131959389 + NM_005732 RAD50 0 . . . 2.97 74.88 30 6.55 Yes 54 0.04 No 0 0 No -29 0.84 Yes 47 64.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68645970 + NM_133509 RAD51B 0 . . . 0.95 0 83 6.24 Yes 49 0.5 No 0 0 No -44 0.67 Yes 50 87.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68446022 + NM_133509 RAD51B 0 . . . 5.95 76.32 23 4.79 No 6 0.67 No 0 0 No -22 0.38 No 45 58.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68901299 + NM_133509 RAD51B 0 . . . 2.35 71.98 19 4.24 No 13 0.07 No 0 0 No -19 0.63 No 45 54.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29102877 - NM_001005735 CHEK2 0 . . . 3.94 84.96 24 4.39 No 25 -1.82 No 0 0 No -24 0.81 Yes 21 35.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68749706 + NM_133509 RAD51B 0 . . . 6.51 85.59 26 3.97 No 58 0.21 No 0 0 No -25 0.5 No 43 79.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59872277 - NM_032043 BRIP1 0 . . . 4.02 77.88 16 5.77 Yes -2 1.27 Yes 0 0 No -18 0.65 No 41 45.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131944513 + NM_005732 RAD50 0 . . . 1.2 53.83 27 6.16 Yes 41 0.61 No 0 0 No -26 0.89 Yes 43 53.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94163116 - NM_005591 MRE11 0 . . . 1.42 72.07 21 8.1 Yes 58 0.58 No 0 0 No -26 0.72 Yes 48 78.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215666720 - NM_000465 BARD1 0 . . . 3.73 69.79 21 4.13 No 65 -2.55 No 0 0 No -21 0.52 No 43 64.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190724839 + NM_000534 PMS1 0 . . . 6.18 72.5 24 5.47 No 59 1.24 Yes 0 0 No -24 0.35 No 38 69.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69111060 + NM_133509 RAD51B 0 . . . 1.48 68.04 9 3.87 No 2 1.05 Yes 0 0 No -25 0.65 No 56 54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56807305 + NM_058216 RAD51C 0 . . . 1.17 0 33 5.62 Yes 14 0.51 No 0 0 No -25 0.5 No 33 72.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68333489 + NM_133509 RAD51B 0 . . . 8.29 81.43 29 6.78 Yes 48 1.08 Yes 0 0 No -28 0.84 Yes 49 90.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56783030 + NM_058216 RAD51C 0 . . . 1.71 69.38 21 4.66 No 29 1.81 Yes 0 0 No -20 0.53 No 48 70.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68476274 + NM_133509 RAD51B 0 . . . 0.82 0 28 6.27 Yes 7 1.27 Yes 0 0 No -33 0.58 No 47 78.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68891702 + NM_133509 RAD51B 0 . . . 4 82.27 25 6.06 Yes 28 -1.48 No 0 0 No -25 0.57 No 42 53.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89699291 + NM_000314 PTEN 0 . . . 0.27 70.83 30 6 Yes 33 1.16 Yes 0 0 No -29 0.82 Yes 25 67.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69108305 + NM_133509 RAD51B 0 . . . 0.34 0 34 5.87 Yes 49 0.6 No 0 0 No -33 0.47 No 51 74.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52435904 - NM_004656 BAP1 0 . . . 10.02 85.92 39 6.15 Yes 7 1.25 Yes 0 0 No -23 0.92 Yes 51 48.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131965805 + NM_005732 RAD50 0 . . . 1.23 71.93 17 4.44 No 62 1.18 Yes 0 0 No -21 0.44 No 17 42.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68872132 + NM_133509 RAD51B 0 . . . 3.68 80.28 30 4.24 No 58 -4 No 0 0 No -20 0.58 No 47 44.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68984358 + NM_133509 RAD51B 0 . . . 0.43 0 16 4.63 No 13 0.23 No 0 0 No -25 0.66 No 45 91.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41214752 - NM_007294 BRCA1 0 . . . 3.89 67.4 36 7.01 Yes 46 0.66 No 0 0 No -28 0.42 No 47 85.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41224187 - NM_007294 BRCA1 0 . . . 7.47 87.82 21 5 No 59 1.2 Yes 0 0 No -23 0.6 No 43 65.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94175141 - NM_005591 MRE11 0 . . . 2.3 84.41 33 4.95 No 19 1.86 Yes 0 0 No -27 0.84 Yes 39 87.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104171063 - NM_001100119 XRCC3 0 . . . 3.22 71.87 35 4.76 No 47 1.49 Yes 0 0 No -27 0.62 No 44 71.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59842362 - NM_032043 BRIP1 0 . . . 5.63 88 33 6.85 Yes 22 0.28 No 0 0 No -32 0.68 Yes 50 33.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68378222 + NM_133509 RAD51B 0 . . . 4.87 83.19 17 6.93 Yes 38 0.66 No 0 0 No -29 0.43 No 34 84.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59923479 - NM_032043 BRIP1 0 . . . 1.81 62.08 39 6.32 Yes 6 0.85 Yes 0 0 No -25 0.56 No 52 40.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47785499 + NM_000251 MSH2 0 . . . 4.66 76.59 40 5.86 Yes 44 -1.23 No 0 0 No -39 0.73 Yes 46 77.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108139056 + NM_000051 ATM 0 . . . 2.6 84.56 51 6.83 Yes 20 0.42 No 0 0 No -50 0.42 No 37 72.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59920178 - NM_032043 BRIP1 0 . . . 1.09 61.13 15 5.59 Yes 73 1.28 Yes 0 0 No -27 0.72 Yes 43 68.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131967952 + NM_005732 RAD50 0 . . . 5.92 84.32 19 5 No 37 0.61 No 0 0 No -48 0.28 No 46 31.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29118754 - NM_001005735 CHEK2 0 . . . 4.67 62.46 45 6.63 Yes 64 -4.72 No 0 0 No -32 0.56 No 42 77.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48019166 + NM_000179 MSH6 0 . . . 4.16 85.86 31 5.48 No 3 1.07 Yes 0 0 No -31 0.52 No 45 67.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152347803 - NM_005431 XRCC2 0 . . . 4.86 84.47 27 3.79 No 8 1.07 Yes 0 0 No -26 0.59 No 50 85.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215643097 - NM_000465 BARD1 0 . . . 3.04 72.04 23 5.14 No 75 0.71 No 0 0 No -27 0.65 No 41 63.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69021361 + NM_133509 RAD51B 0 . . . 10.28 81.54 22 4.9 No 68 0.72 No 0 0 No -55 0.34 No 27 65.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75479350 - NM_001040108 MLH3 0 . . . 0.7 71.88 19 4.9 No -4 0.68 No 0 0 No -26 0.52 No 48 58.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68487038 + NM_133509 RAD51B 0 . . . 3.33 85.24 19 4.8 No 34 1.24 Yes 0 0 No -18 0.36 No 24 81.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215630816 - NM_000465 BARD1 0 . . . 6.56 91.83 51 8.58 Yes 30 1.1 Yes 0 0 No -31 0.51 No 47 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69093228 + NM_133509 RAD51B 0 . . . 2.3 67.52 32 6.92 Yes 63 1.25 Yes 0 0 No -31 0.49 No 21 50.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68938976 + NM_133509 RAD51B 0 . . . 8.56 80.47 53 7.93 Yes 26 1.71 Yes 0 0 No -52 0.52 No 32 89.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131937897 + NM_005732 RAD50 0 . . . 4.21 79.59 15 3.88 No 75 -3.21 No 0 0 No -16 0.31 No 47 69.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89661747 + NM_000314 PTEN 0 . . . 9.31 78.54 22 4.69 No 15 1.21 Yes 0 0 No -21 0.92 Yes 43 84.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90951348 - NM_002485 NBN 0 . . . 6.08 78.18 27 5.03 No 76 0.66 No 0 0 No -26 0.71 Yes 52 71.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68533358 + NM_133509 RAD51B 0 . . . 0.63 60.28 25 6.99 Yes 76 -1.96 No 0 0 No -24 0.85 Yes 46 50.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215651267 - NM_000465 BARD1 0 . . . 9.19 81.09 14 6.69 Yes 38 1.16 Yes 0 0 No -32 0.56 No 35 70.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68497057 + NM_133509 RAD51B 0 . . . 3.32 73.32 14 5.1 No 75 1.96 Yes 0 0 No -27 0.61 No 50 79.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68777781 + NM_133509 RAD51B 0 . . . 6.32 80.58 29 5.92 Yes 42 -3.17 No 0 0 No -28 0.29 No 48 71.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68940712 + NM_133509 RAD51B 0 . . . 5.51 80.46 21 5 No 8 1.02 Yes 0 0 No -20 0.85 Yes 49 69.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108107115 + NM_000051 ATM 0 . . . 2.81 59.93 22 5.12 No 11 0.62 No 0 0 No -53 0.48 No 41 63.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68699532 + NM_133509 RAD51B 0 . . . 6.57 93.59 27 4.36 No 34 1.93 Yes 0 0 No -26 0.82 Yes 48 70.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59794378 - NM_032043 BRIP1 0 . . . 5.47 74.24 20 4.9 No 74 0.97 Yes 0 0 No -19 0.91 Yes 45 63.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68322220 + NM_133509 RAD51B 0 . . . 2.95 70.85 22 4.8 No 21 1.71 Yes 0 0 No -21 0.95 Yes 37 72.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94221898 - NM_005591 MRE11 0 . . . 8.06 79.03 57 8.15 Yes 76 1.87 Yes 0 0 No -56 0.35 No 51 64.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104164514 - NM_001100119 XRCC3 0 . . . 5.33 73.64 23 4.69 No 31 -1.67 No 0 0 No -22 0.87 Yes 44 43.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90957631 - NM_002485 NBN 0 . . . 6.27 79.57 22 5.29 No 13 0.46 No 0 0 No -21 0.78 Yes 45 47.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68422971 + NM_133509 RAD51B 0 . . . 2.42 68.44 30 5.69 Yes 49 0.54 No 0 0 No -29 0.8 Yes 51 63.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94193620 - NM_005591 MRE11 0 . . . 1.66 0 31 5.3 No 52 1.4 Yes 0 0 No -30 0.87 Yes 32 76.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90992911 - NM_002485 NBN 0 . . . 2.4 72.02 28 5.31 No 31 0.52 No 0 0 No -27 0.66 No 47 65.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37057920 + NM_000249 MLH1 0 . . . 3.26 67.38 36 5.74 Yes 39 1.84 Yes 0 0 No -35 0.57 No 19 96.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40998575 + NM_001164269 RAD51 0 . . . 2.19 67.11 22 4.58 No 63 1.07 Yes 0 0 No -26 0.56 No 44 51.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190671935 + NM_000534 PMS1 0 . . . 3.97 78.16 17 7.11 Yes 73 1.67 Yes 0 0 No -33 0.35 No 38 58.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68581929 + NM_133509 RAD51B 0 . . . 1.2 67.82 17 6.93 Yes 28 -3.69 No 0 0 No -29 0.58 No 43 53.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108238383 + NM_000051 ATM 0 . . . 4.21 83.93 16 5.1 No 43 0.76 No 0 0 No -19 0.73 Yes 47 64.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190672923 + NM_000534 PMS1 0 . . . 1.32 68.34 36 5.74 Yes 20 1.11 Yes 0 0 No -35 0.94 Yes 50 51.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37046432 + NM_000249 MLH1 0 . . . 4.98 78.44 14 5.29 No 73 0.73 No 0 0 No -29 0.9 Yes 40 72.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41207033 - NM_007294 BRCA1 0 . . . 0.46 74.55 17 5.29 No 4 0.15 No 0 0 No -48 0.25 No 54 83.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29125086 - NM_001005735 CHEK2 0 . . . 4.67 73.86 19 5.57 Yes 24 1.12 Yes 0 0 No -19 0.57 No 28 66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59833249 - NM_032043 BRIP1 0 . . . 0.84 59.11 35 6.08 Yes 20 0.67 No 0 0 No -34 0.69 Yes 38 73.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68735207 + NM_133509 RAD51B 0 . . . 6.22 88.32 27 6.04 Yes 3 1.21 Yes 0 0 No -26 0.71 Yes 52 51.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56799931 + NM_058216 RAD51C 0 . . . 1.52 63.69 17 4 No 59 1.17 Yes 0 0 No -21 0.33 No 27 51.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190728950 + NM_000534 PMS1 0 . . . 1.93 77.29 26 4.96 No 52 -5.3 No 0 0 No -25 0.52 No 49 68.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47658646 + NM_000251 MSH2 0 . . . 3.85 80.06 23 4.33 No 46 -3.55 No 0 0 No -22 0.7 Yes 51 60.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59942050 - NM_032043 BRIP1 0 . . . 1.05 74.46 28 5.98 Yes -4 1.37 Yes 0 0 No -27 0.56 No 29 91.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215627149 - NM_000465 BARD1 0 . . . 6.53 74.36 29 6.71 Yes 22 0.43 No 0 0 No -28 0.89 Yes 44 52.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68913404 + NM_133509 RAD51B 0 . . . 0.36 69.95 21 7.21 Yes 67 -2.39 No 0 0 No -20 0.84 Yes 23 70.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40991041 + NM_001164269 RAD51 0 . . . 1.83 70.42 18 4.99 No 73 -3.11 No 0 0 No -22 0.58 No 50 46.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41208462 - NM_007294 BRCA1 0 . . . 2.58 84.69 13 5.11 No 26 0.05 No 0 0 No -23 0.34 No 46 62.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33445796 - NM_002878 RAD51D 0 . . . 0.77 67.96 30 6.5 Yes 70 -5.02 No 0 0 No -29 0.95 Yes 46 45.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32904171 + NM_000059 BRCA2 0 . . . 1.33 81.22 27 5.73 Yes 51 0.34 No 0 0 No -26 0.82 Yes 47 91.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41006822 + NM_001164269 RAD51 0 . . . 4.16 80.85 9 5.14 No 1 1.54 Yes 0 0 No -33 0.56 No 46 85.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23625272 - NM_024675 PALB2 0 . . . 3.84 71.72 21 5.02 No 31 0.73 No 0 0 No -45 0.62 No 40 46.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59812632 - NM_032043 BRIP1 0 . . . 0.14 61.22 24 5.48 No 28 1.26 Yes 0 0 No -23 0.83 Yes 30 55.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59859556 - NM_032043 BRIP1 0 . . . 2.2 72.26 12 5.15 No 31 1.21 Yes 0 0 No -25 0.52 No 17 79.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68295883 + NM_133509 RAD51B 0 . . . 3.34 78.06 21 5.08 No 2 1.11 Yes 0 0 No -20 0.84 Yes 36 73.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68345388 + NM_133509 RAD51B 0 . . . 3.38 82.7 29 4.89 No 7 0.62 No 0 0 No -23 0.93 Yes 39 43.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190651326 + NM_000534 PMS1 0 . . . 3.76 68.4 41 7.16 Yes 76 1.12 Yes 0 0 No -25 0.53 No 45 54.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68619865 + NM_133509 RAD51B 0 . . . 2.71 70.84 26 5.38 No 46 0.53 No 0 0 No -25 0.56 No 47 70.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68691529 + NM_133509 RAD51B 0 . . . 2.82 83.78 42 5.99 Yes 75 1.42 Yes 0 0 No -29 0.46 No 51 73.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6019115 - NM_000535 PMS2 0 . . . 6.39 83.46 18 5.17 No 5 0.72 No 0 0 No -18 0.51 No 44 83.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69003352 + NM_133509 RAD51B 0 . . . 8.6 85.12 15 4.54 No 9 0.43 No 0 0 No -39 0.78 Yes 34 76.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68912840 + NM_133509 RAD51B 0 . . . 5.11 90.58 29 6.9 Yes 16 0.53 No 0 0 No -28 0.95 Yes 42 70.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94174098 - NM_005591 MRE11 0 . . . 4.78 77.82 15 5.46 No 2 1.25 Yes 0 0 No -21 0.75 Yes 45 76.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32967271 + NM_000059 BRCA2 0 . . . 3.15 71.07 22 4.58 No 52 0.87 Yes 0 0 No -21 0.65 No 41 64.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68356887 + NM_133509 RAD51B 0 . . . 3.03 77.66 20 5.1 No 21 1.3 Yes 0 0 No -19 0.8 Yes 37 46.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131941117 + NM_005732 RAD50 0 . . . 4.11 82.35 24 4.88 No -1 0.41 No 0 0 No -26 0.58 No 48 73.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47651293 + NM_000251 MSH2 0 . . . 1.1 61.43 17 5.28 No 20 1.32 Yes 0 0 No -24 0.64 No 38 95.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23616228 - NM_024675 PALB2 0 . . . 2.24 80.12 42 5.88 Yes 7 1.02 Yes 0 0 No -27 0.45 No 51 82.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68616824 + NM_133509 RAD51B 0 . . . 0.54 68.06 22 4.31 No 52 0.03 No 0 0 No -52 0.44 No 48 71.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108178209 + NM_000051 ATM 0 . . . 9.28 89.52 19 4.47 No 5 0.3 No 0 0 No -28 0.58 No 41 70.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41015615 + NM_001164269 RAD51 0 . . . 1.84 69.66 45 5.76 Yes 12 0.84 Yes 0 0 No -25 0.58 No 46 48.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195598 + NM_000051 ATM 0 . . . 6.69 86.67 35 4.52 No 1 0.55 No 0 0 No -28 0.67 Yes 46 88.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68816024 + NM_004360 CDH1 0 . . . 3.87 0 25 7 Yes 37 -2.43 No 0 0 No -24 0.63 No 44 35.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37073810 + NM_000249 MLH1 0 . . . 2.81 68.11 34 5.91 Yes 0 1 Yes 0 0 No -29 0.66 Yes 49 67.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59828223 - NM_032043 BRIP1 0 . . . 2.09 65.63 16 5.24 No 31 0.22 No 0 0 No -21 0.64 No 27 61.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68808309 + NM_004360 CDH1 0 . . . 3.56 80.45 14 5 No 53 0.64 No 0 0 No -41 0.5 No 36 62.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41260621 - NM_007294 BRCA1 0 . . . 1.29 83.85 20 5.05 No 3 0.96 Yes 0 0 No -19 0.62 No 51 60.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215629766 - NM_000465 BARD1 0 . . . 4.69 72.09 15 5.39 No 5 1.09 Yes 0 0 No -23 0.6 No 49 44.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108173493 + NM_000051 ATM 0 . . . 1.35 0 22 6.24 Yes 9 0.48 No 0 0 No -21 0.86 Yes 49 78.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45800423 - NM_001048171 MUTYH 0 . . . 4.94 79.45 12 4.8 No 13 1.72 Yes 0 0 No -23 0.8 Yes 49 56.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68628826 + NM_133509 RAD51B 0 . . . 1.68 70.98 33 5.47 No 17 0.09 No 0 0 No -25 0.56 No 41 47.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68865772 + NM_004360 CDH1 0 . . . 2.48 77.72 25 5.53 No 36 0.55 No 0 0 No -24 0.44 No 36 45.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68528410 + NM_133509 RAD51B 0 . . . 10.08 90.56 33 6.46 Yes 74 1.01 Yes 0 0 No -32 0.91 Yes 38 78.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190680242 + NM_000534 PMS1 0 . . . 0.88 0 56 5.99 Yes 22 0.46 No 0 0 No -34 0.67 Yes 36 96.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7588418 - NM_000546 TP53 0 . . . 4.3 64.57 24 5.48 No 47 0.44 No 0 0 No -23 0.76 Yes 52 54.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59886797 - NM_032043 BRIP1 0 . . . 0.95 74.55 30 5.36 No 68 0.77 Yes 0 0 No -29 0.65 No 52 55.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68438134 + NM_133509 RAD51B 0 . . . 2.25 66.2 19 4.8 No 20 0.02 No 0 0 No -58 0.54 No 37 42.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68838206 + NM_133509 RAD51B 0 . . . 3.17 77.77 14 6.27 Yes 58 -3.88 No 0 0 No -27 0.58 No 48 80.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68782725 + NM_004360 CDH1 0 . . . 6.45 74.44 22 4.54 No 31 -1.85 No 0 0 No -21 0.52 No 50 68.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59828683 - NM_032043 BRIP1 0 . . . 7.23 85.44 28 7.01 Yes 13 1.74 Yes 0 0 No -36 0.27 No 34 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68625559 + NM_133509 RAD51B 0 . . . 2.72 69.11 29 4.9 No 58 0.92 Yes 0 0 No -26 0.58 No 46 46.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6012336 - NM_000535 PMS2 0 . . . 2.14 62.61 15 6.4 Yes 49 0.94 Yes 0 0 No -29 0.53 No 29 40.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7575595 - NM_000546 TP53 0 . . . 0.94 0 24 6 Yes 45 1.12 Yes 0 0 No -29 0.47 No 38 56.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108205400 + NM_000051 ATM 0 . . . 4.68 72.56 28 4.95 No 50 1.47 Yes 0 0 No -21 0.78 Yes 40 60.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41247572 - NM_007294 BRCA1 0 . . . 2.93 84.79 11 3.87 No 67 2.09 Yes 0 0 No -26 0.83 Yes 44 59.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47719380 + NM_000251 MSH2 0 . . . 2.22 76.06 26 5.27 No 76 0.98 Yes 0 0 No -26 0.82 Yes 47 64.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190742324 + NM_000534 PMS1 0 . . . 2.92 73.35 17 5.56 Yes 26 1.88 Yes 0 0 No -28 0.88 Yes 32 52.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47662703 + NM_000251 MSH2 0 . . . 4.71 84.17 28 6.12 Yes 68 1.04 Yes 0 0 No -27 0.75 Yes 11 63.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68852207 + NM_133509 RAD51B 0 . . . 2.6 69.12 33 8.05 Yes 11 1.38 Yes 0 0 No -32 0.94 Yes 47 84.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56803948 + NM_058216 RAD51C 0 . . . 3.93 69.72 20 5.1 No 31 -3.11 No 0 0 No -28 0.55 No 40 51.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37057185 + NM_000249 MLH1 0 . . . 3.46 71.21 78 8.12 Yes 41 1.26 Yes 0 0 No -22 0.38 No 45 32.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108166499 + NM_000051 ATM 0 . . . 1.7 83.85 44 7.54 Yes 30 0.98 Yes 0 0 No -43 0.79 Yes 48 73.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1211926 + NM_000455 STK11 0 . . . 3.69 76.67 47 7.21 Yes 18 -2.42 No 0 0 No -47 0.77 Yes 40 74.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108137915 + NM_000051 ATM 0 . . . 0.17 67.45 21 5.2 No 32 0.58 No 0 0 No -20 0.81 Yes 26 65.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68520494 + NM_133509 RAD51B 0 . . . 4 80.57 23 5.82 Yes 18 0.5 No 0 0 No -26 0.67 Yes 45 35.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68747740 + NM_133509 RAD51B 0 . . . 3.66 79.34 39 5.86 Yes 53 -3.67 No 0 0 No -38 0.6 No 44 77.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108182401 + NM_000051 ATM 0 . . . 0.9 0 13 4.83 No 72 -5.45 No 0 0 No -23 0.52 No 34 48.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108103573 + NM_000051 ATM 0 . . . 0.31 70.11 12 5.39 No 55 0.82 Yes 0 0 No -22 0.83 Yes 47 73.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47766297 + NM_000251 MSH2 0 . . . 1.45 0 35 6.66 Yes 32 0.64 No 0 0 No -34 0.57 No 45 54.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190730205 + NM_000534 PMS1 0 . . . 1.91 67.24 15 4.62 No 65 0.13 No 0 0 No -21 0.88 Yes 43 73.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108131219 + NM_000051 ATM 0 . . . 3.29 77.92 28 4.07 No 33 -1.15 No 0 0 No -26 0.45 No 45 74.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131961302 + NM_005732 RAD50 0 . . . 2.12 73.08 23 4.85 No 72 0.58 No 0 0 No -18 0.48 No 37 75.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32946004 + NM_000059 BRCA2 0 . . . 1.15 60.68 34 6.32 Yes 64 0.02 No 0 0 No -36 0.58 No 44 80.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68800657 + NM_004360 CDH1 0 . . . 2.86 0 27 6.35 Yes 55 0.85 Yes 0 0 No -22 0.33 No 47 44.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68747905 + NM_133509 RAD51B 0 . . . 1.94 71.09 33 6.24 Yes 4 0.19 No 0 0 No -32 0.56 No 49 37.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69135083 + NM_133509 RAD51B 0 . . . 4.96 79.18 18 4.79 No 70 0.64 No 0 0 No -24 0.72 Yes 46 62.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32910533 + NM_000059 BRCA2 0 . . . 2.51 77.73 40 5.88 Yes 52 1.01 Yes 0 0 No -28 0.74 Yes 53 30.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37045717 + NM_000249 MLH1 0 . . . 2.82 81.68 15 4.58 No 53 1.21 Yes 0 0 No -14 0.47 No 32 72.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215597385 - NM_000465 BARD1 0 . . . 0.36 74.68 33 5.84 Yes 32 -1.88 No 0 0 No -32 0.82 Yes 39 75.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89721662 + NM_000314 PTEN 0 . . . 7.89 73.37 19 5 No 54 1.35 Yes 0 0 No -21 0.56 No 40 59.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47697656 + NM_000251 MSH2 0 . . . 2.24 80.12 48 7.14 Yes 7 1.16 Yes 0 0 No -44 0.16 No 51 68.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68768184 + NM_133509 RAD51B 0 . . . 9.22 94.44 27 5.2 No 53 -2.34 No 0 0 No -26 0.93 Yes 48 66.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94167990 - NM_005591 MRE11 0 . . . 1.29 69.36 39 6.44 Yes 35 0.67 No 0 0 No -26 0.57 No 52 65.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89626542 + NM_000314 PTEN 0 . . . 3.85 70.04 22 5.74 Yes 3 0.86 Yes 0 0 No -21 0.44 No 38 72.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89720561 + NM_000314 PTEN 0 . . . 4.92 71.62 20 8.01 Yes 12 1.27 Yes 0 0 No -31 0.76 Yes 46 52.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68852503 + NM_004360 CDH1 0 . . . 0.09 74.68 19 5.35 No 4 0.41 No 0 0 No -24 0.58 No 54 75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68776227 + NM_004360 CDH1 0 . . . 2.89 80.6 9 3.87 No 47 0.52 No 0 0 No -26 0.21 No 20 51.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47718346 + NM_000251 MSH2 0 . . . 4.42 84.22 21 4.68 No 8 1.13 Yes 0 0 No -20 0.59 No 50 92.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69106821 + NM_133509 RAD51B 0 . . . 1.54 76.7 14 5 No 62 1.53 Yes 0 0 No -14 0.21 No 50 43.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32925767 + NM_000059 BRCA2 0 . . . 8.46 88.87 37 6.76 Yes 6 0.79 Yes 0 0 No -27 0.67 Yes 43 93.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75512006 - NM_001040108 MLH3 0 . . . 5.41 90.92 15 4.46 No 3 0.8 Yes 0 0 No -22 0.51 No 43 51.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68620485 + NM_133509 RAD51B 0 . . . 3.54 62.51 11 4.19 No 67 0.49 No 0 0 No -24 0.49 No 50 62.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6032289 - NM_000535 PMS2 0 . . . 2.35 75.05 39 5.38 No 60 0.16 No 0 0 No -23 0.52 No 47 56.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68786893 + NM_004360 CDH1 0 . . . 8.11 88.05 43 7.3 Yes 39 -1.41 No 0 0 No -24 0.48 No 46 85.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89681126 + NM_000314 PTEN 0 . . . 1.1 66.46 31 6.47 Yes 16 1.09 Yes 0 0 No -30 0.38 No 42 92.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59923662 - NM_032043 BRIP1 0 . . . 2.71 78.85 38 6.39 Yes 45 -2.98 No 0 0 No -37 0.76 Yes 49 29.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131968632 + NM_005732 RAD50 0 . . . 4.46 80.22 31 5.66 Yes 61 0.6 No 0 0 No -30 0.55 No 28 67.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41217497 - NM_007294 BRCA1 0 . . . 4.17 88.73 16 5.74 Yes 28 0.89 Yes 0 0 No -15 0.22 No 46 39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90995711 - NM_002485 NBN 0 . . . 4.77 77.7 28 6.86 Yes 39 0.44 No 0 0 No -23 0.81 Yes 46 58.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152341755 - NM_005431 XRCC2 0 . . . 0.95 67.59 21 7 Yes -2 0.02 No 0 0 No -20 0.58 No 43 49.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69040518 + NM_133509 RAD51B 0 . . . 1.39 66.96 25 4.96 No 73 -3.06 No 0 0 No -24 0.34 No 43 69.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59759249 - NM_032043 BRIP1 0 . . . 5.06 78.62 10 5 No 73 0.15 No 0 0 No -21 0.61 No 36 60.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68773035 + NM_133509 RAD51B 0 . . . 5.22 0 34 5.03 No 12 1.33 Yes 0 0 No -29 0.9 Yes 46 56.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69075222 + NM_133509 RAD51B 0 . . . 3.88 77.02 19 5 No 64 -3.88 No 0 0 No -44 0.56 No 38 50.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69081851 + NM_133509 RAD51B 0 . . . 3.42 70.85 16 5.55 No 21 0.99 Yes 0 0 No -27 0.64 No 37 75.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68378693 + NM_133509 RAD51B 0 . . . 6.69 73.7 26 6 Yes 62 0.35 No 0 0 No -29 0.71 Yes 42 42.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48011990 + NM_000179 MSH6 0 . . . 0.25 0 16 4.12 No 64 -2.3 No 0 0 No -42 0.39 No 48 71.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69133734 + NM_133509 RAD51B 0 . . . 3.66 82.42 30 3.7 No 46 0.67 No 0 0 No -29 0.6 No 54 43.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131968978 + NM_005732 RAD50 0 . . . 3.21 81.38 20 5.9 Yes 4 1.41 Yes 0 0 No -24 0.58 No 54 68.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68823235 + NM_133509 RAD51B 0 . . . 3.02 55.56 14 2.64 No 42 0.28 No 0 0 No -24 0.52 No 39 43.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131916996 + NM_005732 RAD50 0 . . . 3.25 80.12 14 5.1 No 76 -3.73 No 0 0 No -19 0.59 No 45 20.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41023151 + NM_001164269 RAD51 0 . . . 2.82 0 35 5.71 Yes 73 -4.74 No 0 0 No -35 0.76 Yes 51 61.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84393573 - NM_139076 FAM175A 0 . . . 10.78 83.23 36 4.5 No 62 0.18 No 0 0 No -19 0.53 No 39 77.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68518103 + NM_133509 RAD51B 0 . . . 6.07 79.32 29 7.66 Yes 20 0.84 Yes 0 0 No -28 0.73 Yes 47 50.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68767517 + NM_133509 RAD51B 0 . . . 4.41 85.03 24 5.48 No 53 1.24 Yes 0 0 No -23 0.82 Yes 43 55.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69126746 + NM_133509 RAD51B 0 . . . 0.97 66.4 32 6.83 Yes 26 0.93 Yes 0 0 No -25 0.69 Yes 48 45.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59928268 - NM_032043 BRIP1 0 . . . 4.67 78.81 41 9.06 Yes 14 -1.79 No 0 0 No -38 0.67 Yes 44 87.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68681501 + NM_133509 RAD51B 0 . . . 2.94 64.81 32 6 Yes 74 -2.61 No 0 0 No -31 0.44 No 47 55.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190729537 + NM_000534 PMS1 0 . . . 1.62 62.15 17 5.79 Yes 56 0.61 No 0 0 No -41 0.31 No 43 58.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190708976 + NM_000534 PMS1 0 . . . 6.95 83.35 27 4.75 No 3 0.96 Yes 0 0 No -52 0.53 No 49 91.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215665877 - NM_000465 BARD1 0 . . . 1.34 71.84 18 4.5 No 28 1.19 Yes 0 0 No -27 0.89 Yes 45 53.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190736445 + NM_000534 PMS1 0 . . . 2.15 82.47 31 5.46 No 65 0.86 Yes 0 0 No -30 0.65 No 47 88.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131955783 + NM_005732 RAD50 0 . . . 2.73 77.08 12 4.69 No 76 1.17 Yes 0 0 No -45 0.63 No 49 91.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69039830 + NM_133509 RAD51B 0 . . . 0.11 76.56 15 5.05 No 53 0.91 Yes 0 0 No -20 0.7 Yes 33 94.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131926471 + NM_005732 RAD50 0 . . . 2.23 81.62 24 5.1 No 18 1.31 Yes 0 0 No -31 0.7 Yes 44 97.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68830358 + NM_133509 RAD51B 0 . . . 3.11 65.68 24 5.58 Yes 74 -0.04 No 0 0 No -30 0.7 Yes 19 74.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108110432 + NM_000051 ATM 0 . . . 7.06 87.08 9 3.87 No 10 1.2 Yes 0 0 No -32 0.73 Yes 48 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23624120 - NM_024675 PALB2 0 . . . 1.63 77.33 21 6.05 Yes 58 -4.21 No 0 0 No -20 0.41 No 55 61.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190716767 + NM_000534 PMS1 0 . . . 0.48 67.76 18 5.74 Yes 23 0.3 No 0 0 No -26 0.62 No 35 90.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131892681 + NM_005732 RAD50 0 . . . 5.21 78.49 14 3.53 No 55 -3.36 No 0 0 No -21 0.85 Yes 51 38.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68521816 + NM_133509 RAD51B 0 . . . 7 74.33 15 4.58 No -3 0.04 No 0 0 No -27 0.61 No 47 51.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68723493 + NM_133509 RAD51B 0 . . . 7.21 82.65 52 6.93 Yes 24 1.61 Yes 0 0 No -42 0.4 No 34 82.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68561433 + NM_133509 RAD51B 0 . . . 5.26 80.87 28 5.12 No 15 0.17 No 0 0 No -27 0.78 Yes 48 79.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21969945 - NM_000077 CDKN2A 0 . . . 5.02 77.89 17 5.39 No 30 -3.11 No 0 0 No -26 0.58 No 14 49.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68549992 + NM_133509 RAD51B 0 . . . 0.21 0 18 4.9 No 69 -2.07 No 0 0 No -17 0.73 Yes 37 63.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68549539 + NM_133509 RAD51B 0 . . . 5.26 75.12 15 4.11 No 34 2.07 Yes 0 0 No -21 0.61 No 44 69.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84392191 - NM_139076 FAM175A 0 . . . 3.19 61.39 21 5.07 No 30 1.05 Yes 0 0 No -20 0.53 No 28 34.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68397483 + NM_133509 RAD51B 0 . . . 5.04 76.8 38 6.08 Yes 64 0.31 No 0 0 No -35 0.61 No 49 90.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69091417 + NM_133509 RAD51B 0 . . . 3.98 64.61 22 5.29 No 43 -4.19 No 0 0 No -26 0.67 Yes 53 79.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108206507 + NM_000051 ATM 0 . . . 7.78 89.09 28 5.58 Yes 9 0.39 No 0 0 No -25 0.37 No 49 79.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84399523 - NM_139076 FAM175A 0 . . . 2.11 76.25 12 5.46 No 59 0.7 No 0 0 No -20 0.47 No 49 80.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75512880 - NM_001040108 MLH3 0 . . . 3.97 84.41 18 5.37 No 35 -1.09 No 0 0 No -27 0.47 No 40 70.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68904202 + NM_133509 RAD51B 0 . . . 9.29 85.4 29 5.84 Yes 19 1.19 Yes 0 0 No -28 0.8 Yes 39 82.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89723853 + NM_000314 PTEN 0 . . . 5.02 83.56 13 4.55 No 69 1.35 Yes 0 0 No -27 0.56 No 53 66.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108100425 + NM_000051 ATM 0 . . . 0.67 83.56 47 7.62 Yes 8 0.07 No 0 0 No -27 0.84 Yes 50 63.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33428910 - NM_002878 RAD51D 0 . . . 8.35 82.82 19 4.9 No 9 1.49 Yes 0 0 No -44 0.68 Yes 39 61.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69128673 + NM_133509 RAD51B 0 . . . 7.99 89.65 29 5.92 Yes 30 0.49 No 0 0 No -29 0.51 No 47 75.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68329274 + NM_133509 RAD51B 0 . . . 1.31 64.6 22 6.11 Yes 67 0.68 No 0 0 No -21 0.57 No 41 46.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7579518 - NM_000546 TP53 0 . . . 0.77 69.8 19 4.99 No 73 0.9 Yes 0 0 No -22 0.84 Yes 17 22.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33440708 - NM_002878 RAD51D 0 . . . 1.52 79.06 34 4.34 No 21 -1.84 No 0 0 No -22 0.48 No 61 52.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108234496 + NM_000051 ATM 0 . . . 5.81 89.26 12 5.29 No 13 0.87 Yes 0 0 No -22 0.63 No 45 59.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104173636 - NM_001100119 XRCC3 0 . . . 1.89 77.11 29 6.05 Yes 30 1.12 Yes 0 0 No -28 0.42 No 48 57.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105206167 + NM_021930 RINT1 0 . . . 8.9 86.72 15 5.39 No 5 2.03 Yes 0 0 No -45 0.41 No 53 57.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32946745 + NM_000059 BRCA2 0 . . . 6.64 85.95 22 5.09 No 0 0.94 Yes 0 0 No -19 0.29 No 47 54.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23642421 - NM_024675 PALB2 0 . . . 7.28 85.02 38 5.81 Yes 20 1.69 Yes 0 0 No -40 0.36 No 38 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90958459 - NM_002485 NBN 0 . . . 5.84 67.75 58 8.25 Yes -1 0.47 No 0 0 No -35 0.65 No 59 42.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89651940 + NM_000314 PTEN 0 . . . 4.74 0 43 4.95 No 47 0.91 Yes 0 0 No -36 0.79 Yes 46 53.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23624205 - NM_024675 PALB2 0 . . . 0.17 74.68 33 5.58 Yes 65 1 Yes 0 0 No -33 0.48 No 54 30.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69094058 + NM_133509 RAD51B 0 . . . 7.36 82.77 27 5.96 Yes -4 0.66 No 0 0 No -38 0.43 No 35 84.11 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68499506 + NM_133509 RAD51B 0 . . . 2.25 0 36 5.76 Yes 13 1.26 Yes 0 0 No -30 0.58 No 45 94.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47641789 + NM_000251 MSH2 0 . . . 0.81 0 21 4.65 No 6 1.27 Yes 0 0 No -20 0.8 Yes 40 65.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89647045 + NM_000314 PTEN 0 . . . 2.4 73.06 19 5.37 No 65 0.39 No 0 0 No -22 0.5 No 49 48.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33428735 - NM_002878 RAD51D 0 . . . 9.96 83.66 11 4.12 No 68 0.96 Yes 0 0 No -31 0.61 No 49 73.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68315117 + NM_133509 RAD51B 0 . . . 2.13 70.09 23 6 Yes 47 1.22 Yes 0 0 No -31 0.53 No 46 69.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89673785 + NM_000314 PTEN 0 . . . 5.13 79.11 17 4.8 No 44 1.07 Yes 0 0 No -39 0.73 Yes 47 72.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68924271 + NM_133509 RAD51B 0 . . . 3.78 73.99 18 3.64 No 55 -1.78 No 0 0 No -23 0.22 No 35 63.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68940124 + NM_133509 RAD51B 0 . . . 7.26 73.45 19 4.45 No NA NA NA 0 0 No -18 0.86 Yes 34 22.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84408024 - NM_139076 FAM175A 0 . . . 4.72 75.86 21 5.97 Yes 36 0.18 No 0 0 No -28 0.43 No 47 74.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47701782 + NM_000251 MSH2 0 . . . 3.66 80.12 22 5.29 No 7 1.16 Yes 0 0 No -21 0.87 Yes 51 83.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41021173 + NM_001164269 RAD51 0 . . . 4.6 0 16 5.83 Yes 10 1.54 Yes 0 0 No -27 0.51 No 48 81.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68440719 + NM_133509 RAD51B 0 . . . 0.1 65.21 16 5.92 Yes 70 0.57 No 0 0 No -28 0.34 No 50 25.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108240479 + NM_000051 ATM 0 . . . 1.56 84.52 36 6.08 Yes 24 -2.3 No 0 0 No -33 0.66 No 54 49.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41269146 - NM_007294 BRCA1 0 . . . 7.15 75.5 25 4.88 No 0 0.9 Yes 0 0 No -24 0.7 Yes 47 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69104560 + NM_133509 RAD51B 0 . . . 4.77 80.1 22 3.95 No 42 0.42 No 0 0 No -28 0.36 No 48 47.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6016655 - NM_000535 PMS2 0 . . . 5.07 0 14 5.11 No 37 -0.63 No 0 0 No -19 0.24 No 40 47.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90968700 - NM_002485 NBN 0 . . . 3.75 82.78 24 5.48 No 42 -2.54 No 0 0 No -30 0.76 Yes 37 67.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59914457 - NM_032043 BRIP1 0 . . . 7.88 79.28 26 6.31 Yes 9 1.01 Yes 0 0 No -25 0.84 Yes 32 83.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84397741 - NM_139076 FAM175A 0 . . . 0.54 73.69 31 4.58 No 45 -3.86 No 0 0 No -29 0.46 No 46 73.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68710340 + NM_133509 RAD51B 0 . . . 3.03 71.07 34 6.23 Yes 56 0.86 Yes 0 0 No -33 0.74 Yes 49 89.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105172195 + NM_021930 RINT1 0 . . . 7.3 82.61 26 6.48 Yes 8 1.22 Yes 0 0 No -25 0.67 Yes 47 73.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215668167 - NM_000465 BARD1 0 . . . 5.08 84.5 16 8.22 Yes 10 0.88 Yes 0 0 No -33 0.45 No 48 88.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108124127 + NM_000051 ATM 0 . . . 4.14 80.02 18 4.47 No 19 0.98 Yes 0 0 No -38 0.58 No 39 81.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131954251 + NM_005732 RAD50 0 . . . 3.18 82.52 21 4.9 No 3 1.48 Yes 0 0 No -20 0.87 Yes 44 52.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68830183 + NM_133509 RAD51B 0 . . . 8.64 83.66 14 4.78 No 29 0.45 No 0 0 No -19 0.84 Yes 43 70.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48008225 + NM_000179 MSH6 0 . . . 3.63 71.7 27 5.58 Yes 21 -1.79 No 0 0 No -26 0.73 Yes 53 64.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108227354 + NM_000051 ATM 0 . . . 3.23 77.67 16 4.69 No 18 0.83 Yes 0 0 No -47 0.68 Yes 40 62.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89649179 + NM_000314 PTEN 0 . . . 2.89 73.51 19 4.75 No 58 1.12 Yes 0 0 No -17 0.6 No 45 88.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68296222 + NM_133509 RAD51B 0 . . . 2.89 68.34 21 4.51 No 21 1.7 Yes 0 0 No -24 0.54 No 42 78.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68452324 + NM_133509 RAD51B 0 . . . 2.97 66.01 29 6.17 Yes 7 1.15 Yes 0 0 No -34 0.77 Yes 39 70.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215661049 - NM_000465 BARD1 0 . . . 0.21 73.49 29 5.65 Yes 49 1.88 Yes 0 0 No -28 0.68 Yes 50 53.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23639381 - NM_024675 PALB2 0 . . . 3.6 85.02 17 6.16 Yes 4 1.39 Yes 0 0 No -31 0.83 Yes 54 63.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131928601 + NM_005732 RAD50 0 . . . 0.99 65.59 29 5.29 No 64 0.42 No 0 0 No -42 0.52 No 44 40.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104183437 - NM_001100119 XRCC3 0 . . . 2.19 76.44 15 5.2 No 13 0.41 No 0 0 No -50 0.48 No 45 89.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75501362 - NM_001040108 MLH3 0 . . . 2.77 0 24 4.97 No 8 0.63 No 0 0 No -23 0.58 No 47 48.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68938829 + NM_133509 RAD51B 0 . . . 1 57.55 15 5.29 No 38 0.06 No 0 0 No -21 0.82 Yes 46 63.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59934652 - NM_032043 BRIP1 0 . . . 0.94 61.18 35 6.71 Yes 39 0.76 No 0 0 No -21 0.61 No 34 52.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32964802 + NM_000059 BRCA2 0 . . . 6.98 85.03 31 5.74 Yes 38 0.57 No 0 0 No -34 0.49 No 40 90.28 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37080440 + NM_000249 MLH1 0 . . . 4.3 78.59 27 5.06 No 68 1.64 Yes 0 0 No -26 0.93 Yes 39 84.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69041773 + NM_133509 RAD51B 0 . . . 5.66 80.52 11 5.95 Yes 49 1.71 Yes 0 0 No -27 0.76 Yes 34 55.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89699858 + NM_000314 PTEN 0 . . . 5.42 82.49 10 4 No 50 0.15 No 0 0 No -43 0.93 Yes 45 42.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68832641 + NM_004360 CDH1 0 . . . 1.35 62.79 49 7.28 Yes 64 0.9 Yes 0 0 No -25 0.78 Yes 37 68.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75515023 - NM_001040108 MLH3 0 . . . 5.57 78.94 18 5.53 No 15 0.79 Yes 0 0 No -24 0.66 Yes 47 46.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131899319 + NM_005732 RAD50 0 . . . 6.4 86.04 32 6.14 Yes 28 -2.63 No 0 0 No -31 0.78 Yes 48 75.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68456584 + NM_133509 RAD51B 0 . . . 7.28 86.43 12 3.9 No 12 0.73 No 0 0 No -25 0.9 Yes 46 61.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68840107 + NM_133509 RAD51B 0 . . . 3.06 65.4 25 5.57 Yes 63 -5.88 No 0 0 No -24 0.63 No 47 70.35 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56798018 + NM_058216 RAD51C 0 . . . 2.24 80.12 14 4.21 No 69 0.64 No 0 0 No -26 0.44 No 51 50.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59814355 - NM_032043 BRIP1 0 . . . 7.32 86.66 22 4.02 No 27 1.22 Yes 0 0 No -19 0.66 No 23 57.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47771874 + NM_000251 MSH2 0 . . . 0.63 0 19 4.58 No 54 1.87 Yes 0 0 No -18 0.93 Yes 43 90.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89678798 + NM_000314 PTEN 0 . . . 3.04 0 18 4.9 No 64 0.25 No 0 0 No -17 0.35 No 45 82.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47735891 + NM_000251 MSH2 0 . . . 5.21 80.88 21 5.96 Yes 29 -0.3 No 0 0 No -20 0.82 Yes 41 30.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37053692 + NM_000249 MLH1 0 . . . 1.03 72.84 28 5.57 Yes 28 0.14 No 0 0 No -27 0.67 Yes 50 39.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21988117 - NM_000077 CDKN2A 0 . . . 1.05 73.29 29 5.39 No 33 -3.99 No 0 0 No -28 0.85 Yes 43 44.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215601666 - NM_000465 BARD1 0 . . . 0.66 0 25 5.57 Yes 4 0.41 No 0 0 No -24 0.74 Yes 48 50.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215669261 - NM_000465 BARD1 0 . . . 1.49 72.47 37 6.54 Yes 56 0.39 No 0 0 No -36 0.75 Yes 58 32.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69002060 + NM_133509 RAD51B 0 . . . 2.22 71.65 27 6.08 Yes 32 1.98 Yes 0 0 No -26 0.52 No 26 84.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108142865 + NM_000051 ATM 0 . . . 3.19 70.85 19 5 No 23 1.58 Yes 0 0 No -21 0.42 No 45 74.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108134563 + NM_000051 ATM 0 . . . 1.52 68.82 39 6.38 Yes 58 -5 No 0 0 No -27 0.89 Yes 52 39.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21978455 - NM_000077 CDKN2A 0 . . . 5.45 80.97 31 4.28 No 6 0.61 No 0 0 No -23 0.48 No 37 56.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680608 + NM_000251 MSH2 0 . . . 4.39 74.41 24 5.46 No 41 1.25 Yes 0 0 No -23 0.74 Yes 48 52.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47650606 + NM_000251 MSH2 0 . . . 4.2 83.57 13 4.8 No 32 1.27 Yes 0 0 No -23 0.34 No 33 79.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68335575 + NM_133509 RAD51B 0 . . . 1.38 72.74 23 4.58 No 72 2.32 Yes 0 0 No -22 0.62 No 41 44.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29086613 - NM_001005735 CHEK2 0 . . . 0.3 84.41 20 7.13 Yes 18 1.09 Yes 0 0 No -19 0.53 No 40 94.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94216076 - NM_005591 MRE11 0 . . . 0.08 68.82 17 5.22 No 1 0.89 Yes 0 0 No -28 0.68 Yes 24 51.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68716548 + NM_133509 RAD51B 0 . . . 7.2 79.12 33 5.74 Yes 70 -2.87 No 0 0 No -32 0.71 Yes 38 60.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190700780 + NM_000534 PMS1 0 . . . 5.5 81.59 21 5.04 No 7 0.79 Yes 0 0 No -20 0.58 No 48 54.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108195441 + NM_000051 ATM 0 . . . 5.14 73.2 14 6 Yes 75 1.47 Yes 0 0 No -25 0.35 No 21 90.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29136508 - NM_001005735 CHEK2 0 . . . 1.82 72.3 21 4.67 No 31 -3.75 No 0 0 No -20 0.89 Yes 47 44.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68592634 + NM_133509 RAD51B 0 . . . 3.85 72.75 16 4.58 No 34 0.64 No 0 0 No -21 0.94 Yes 20 72.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69051747 + NM_133509 RAD51B 0 . . . 5.72 75.5 18 3.74 No 4 0.99 Yes 0 0 No -26 0.85 Yes 45 54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41239513 - NM_007294 BRCA1 0 . . . 2.39 80.12 20 6.07 Yes 6 1.58 Yes 0 0 No -30 0.78 Yes 52 82.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68537111 + NM_133509 RAD51B 0 . . . 7.04 0 30 6.78 Yes 23 0.41 No 0 0 No -29 0.83 Yes 49 63.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69019902 + NM_133509 RAD51B 0 . . . 3.59 69.51 26 5.22 No 69 1.36 Yes 0 0 No -25 0.82 Yes 29 42.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68811116 + NM_133509 RAD51B 0 . . . 0.09 74.68 11 4.12 No 4 0.41 No 0 0 No -54 0.47 No 54 68.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89639660 + NM_000314 PTEN 0 . . . 2.13 62.86 24 5.18 No 73 0.79 Yes 0 0 No -23 0.91 Yes 46 35.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94217716 - NM_005591 MRE11 0 . . . 2.18 65.66 16 4.6 No 26 0.58 No 0 0 No -31 0.68 Yes 37 75.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32955870 + NM_000059 BRCA2 0 . . . 1.09 0 32 5.57 Yes 2 0.54 No 0 0 No -31 0.95 Yes 56 79.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32933975 + NM_000059 BRCA2 0 . . . 2.28 78.72 13 3.63 No 48 0.61 No 0 0 No -49 0.42 No 50 61.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69038714 + NM_133509 RAD51B 0 . . . 2.53 65.27 16 4.69 No 70 -1.65 No 0 0 No -37 0.4 No 38 67.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84385692 - NM_139076 FAM175A 0 . . . 4.54 86.23 21 4.44 No 17 0.35 No 0 0 No -27 0.42 No 41 59.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47773591 + NM_000251 MSH2 0 . . . 3.51 66 29 7.35 Yes 30 0.55 No 0 0 No -28 0.94 Yes 46 71.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68345304 + NM_133509 RAD51B 0 . . . 6.98 77.99 47 5.81 Yes 71 0.28 No 0 0 No -25 0.85 Yes 46 48.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68834485 + NM_133509 RAD51B 0 . . . 8.71 84.7 43 5.48 No 11 1.82 Yes 0 0 No -27 0.72 Yes 47 96.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68826153 + NM_004360 CDH1 0 . . . 4.64 84.41 12 3.9 No 9 2.23 Yes 0 0 No -19 0.35 No 49 60.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56784998 + NM_058216 RAD51C 0 . . . 6.65 82.59 42 7.53 Yes 70 1.12 Yes 0 0 No -31 0.73 Yes 36 69.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69047458 + NM_133509 RAD51B 0 . . . 8.12 90.73 14 5.45 No 25 1.91 Yes 0 0 No -25 0.83 Yes 51 71.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68942794 + NM_133509 RAD51B 0 . . . 4.18 78.9 21 4.42 No 73 0.51 No 0 0 No -20 0.7 Yes 48 11.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59866262 - NM_032043 BRIP1 0 . . . 4.74 81.75 22 4.69 No 35 0.88 Yes 0 0 No -19 0.34 No 23 90.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41196200 - NM_007294 BRCA1 0 . . . 4.83 83.25 25 5.29 No 46 0.64 No 0 0 No -29 0.59 No 49 66.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59911714 - NM_032043 BRIP1 0 . . . 5.74 78.44 47 8.54 Yes 2 0.32 No 0 0 No -36 0.61 No 56 48.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68474810 + NM_133509 RAD51B 0 . . . 2.48 62.02 18 4.89 No 33 0.24 No 0 0 No -25 0.62 No 50 74.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68401222 + NM_133509 RAD51B 0 . . . 2.21 62.01 21 5.09 No 38 1.45 Yes 0 0 No -20 0.87 Yes 20 92.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59784533 - NM_032043 BRIP1 0 . . . 2.53 70.12 17 5.16 No 15 -1.76 No 0 0 No -25 0.44 No 43 53.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1213040 + NM_000455 STK11 0 . . . 4.42 84.17 49 6.89 Yes 42 1.54 Yes 0 0 No -24 0.39 No 16 96.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59758567 - NM_032043 BRIP1 0 . . . 5.15 75.58 21 5.57 Yes 39 1.05 Yes 0 0 No -25 0.72 Yes 47 93.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190689662 + NM_000534 PMS1 0 . . . 7.8 82.76 21 5.27 No 22 1.13 Yes 0 0 No -26 0.8 Yes 53 72.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68767331 + NM_133509 RAD51B 0 . . . 5.82 84 22 5.62 Yes 60 0.29 No 0 0 No -21 0.73 Yes 40 38.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29108401 - NM_001005735 CHEK2 0 . . . 7.16 92.44 28 6.22 Yes 56 0.67 No 0 0 No -28 0.31 No 45 83.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59864108 - NM_032043 BRIP1 0 . . . 1.9 63.81 20 3.35 No 61 -5.52 No 0 0 No -19 0.87 Yes 35 23.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6013961 - NM_000535 PMS2 0 . . . 3.7 79.59 23 3.62 No 23 1.2 Yes 0 0 No -47 0.56 No 35 72.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108178087 + NM_000051 ATM 0 . . . 0.42 74.73 48 7.04 Yes 33 1.35 Yes 0 0 No -29 0.69 Yes 40 46.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29104643 - NM_001005735 CHEK2 0 . . . 3.9 67.25 22 4.08 No 76 0.94 Yes 0 0 No -31 0.38 No 45 84.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32973828 + NM_000059 BRCA2 0 . . . 10.01 82.78 43 6.47 Yes 10 1.71 Yes 0 0 No -22 0.34 No 48 89.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41249702 - NM_007294 BRCA1 0 . . . 3.49 73.14 25 5.18 No 60 0.68 No 0 0 No -30 0.4 No 54 51.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68866787 + NM_004360 CDH1 0 . . . 7.54 78.45 21 4.8 No 64 0.42 No 0 0 No -20 0.89 Yes 46 80.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68849090 + NM_004360 CDH1 0 . . . 0.67 81.37 19 4.9 No 69 -4.34 No 0 0 No -43 0.41 No 50 87.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94222304 - NM_005591 MRE11 0 . . . 1.32 75.6 17 5.83 Yes 73 1.17 Yes 0 0 No -23 0.54 No 32 58.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 52437712 - NM_004656 BAP1 0 . . . 3.56 72.81 34 5.91 Yes 58 0.68 No 0 0 No -33 0.82 Yes 51 78.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215591208 - NM_000465 BARD1 0 . . . 0.35 68.03 33 5.83 Yes 52 1.02 Yes 0 0 No -27 0.71 Yes 45 62.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68790348 + NM_133509 RAD51B 0 . . . 4.17 74.85 22 5.28 No 6 0.65 No 0 0 No -21 0.79 Yes 40 66.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40996293 + NM_001164269 RAD51 0 . . . 2.15 83.32 19 4.9 No -3 -1.23 No 0 0 No -18 0.5 No 46 77.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47652216 + NM_000251 MSH2 0 . . . 3.13 78 29 5.62 Yes 25 1.08 Yes 0 0 No -28 0.88 Yes 33 83.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190743702 + NM_000534 PMS1 0 . . . 2.36 79.56 29 5.29 No 49 1.37 Yes 0 0 No -25 0.57 No 48 68.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41233186 - NM_007294 BRCA1 0 . . . 0.45 0 20 3.26 No 10 0.86 Yes 0 0 No -19 0.7 Yes 37 65.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68935493 + NM_133509 RAD51B 0 . . . 2.36 66.39 40 9.28 Yes 55 2.72 Yes 0 0 No -27 0.71 Yes 45 75.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29094606 - NM_001005735 CHEK2 0 . . . 7.49 88.3 33 6.55 Yes 59 0.14 No 0 0 No -27 0.56 No 40 70.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68893321 + NM_133509 RAD51B 0 . . . 3.66 76.73 25 5.16 No -1 0.16 No 0 0 No -24 0.83 Yes 33 54.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94179520 - NM_005591 MRE11 0 . . . 3.04 74.61 35 6.08 Yes 56 0.35 No 0 0 No -34 0.88 Yes 49 34.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59801084 - NM_032043 BRIP1 0 . . . 2.62 70.54 34 6.08 Yes 33 1.17 Yes 0 0 No -23 0.62 No 45 53.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108147709 + NM_000051 ATM 0 . . . 9.07 86.22 19 5 No 19 0.66 No 0 0 No -18 0.73 Yes 39 58.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131910498 + NM_005732 RAD50 0 . . . 1.08 0 17 4.8 No 32 1.29 Yes 0 0 No -23 0.46 No 13 57.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68566228 + NM_133509 RAD51B 0 . . . 5.86 83.35 25 5.53 No 3 0.92 Yes 0 0 No -24 0.72 Yes 25 65.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47653540 + NM_000251 MSH2 0 . . . 2.22 86.31 28 6.4 Yes 21 0.78 Yes 0 0 No -31 0.65 No 50 58.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152364893 - NM_005431 XRCC2 0 . . . 4.75 82.31 17 5.29 No 60 1.07 Yes 0 0 No -21 0.56 No 39 53.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69097872 + NM_133509 RAD51B 0 . . . 0.16 60.07 24 5.29 No 69 -5.52 No 0 0 No -21 0.75 Yes 29 32.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68473834 + NM_133509 RAD51B 0 . . . 3.68 65.79 13 5.17 No 47 1.86 Yes 0 0 No -21 0.5 No 29 74.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6034641 - NM_000535 PMS2 0 . . . 7.26 88.36 26 5.29 No 54 0.44 No 0 0 No -21 0.4 No 38 48.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131978138 + NM_005732 RAD50 0 . . . 3.79 66.53 25 5.8 Yes 72 -4.61 No 0 0 No -24 0.81 Yes 42 40.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68290854 + NM_133509 RAD51B 0 . . . 4.09 78.43 22 4.54 No 0 0.4 No 0 0 No -24 0.79 Yes 45 62.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41207879 - NM_007294 BRCA1 0 . . . 3.51 71.09 33 6.08 Yes 10 1.33 Yes 0 0 No -30 0.38 No 48 90.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68624683 + NM_133509 RAD51B 0 . . . 4.5 67.87 9 3.87 No 54 0.82 Yes 0 0 No -21 0.36 No 48 60.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68937194 + NM_133509 RAD51B 0 . . . 6.97 86.1 17 6.32 Yes -4 0.02 No 0 0 No -27 0.6 No 42 65.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47734027 + NM_000251 MSH2 0 . . . 4.12 88.75 18 5.39 No -2 0.32 No 0 0 No -22 0.62 No 60 32.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59917714 - NM_032043 BRIP1 0 . . . 3.97 84.41 20 4.8 No 59 -2.65 No 0 0 No -19 0.81 Yes 32 50.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29107548 - NM_001005735 CHEK2 0 . . . 7.8 78.28 26 3.17 No -3 0.97 Yes 0 0 No -18 0.45 No 42 87.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68610012 + NM_133509 RAD51B 0 . . . 3.07 0 19 5 No 17 0.1 No 0 0 No -18 0.38 No 41 68.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402542 + NM_133509 RAD51B 0 . . . 0.96 77.96 16 3.95 No 49 1.48 Yes 0 0 No -16 0.59 No 12 43.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215620657 - NM_000465 BARD1 0 . . . 6.36 70.61 15 4.59 No 49 -4.89 No 0 0 No -18 0.26 No 51 62.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68459696 + NM_133509 RAD51B 0 . . . 6.57 73.42 22 5.74 Yes 65 1.37 Yes 0 0 No -21 0.85 Yes 12 37.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69135556 + NM_133509 RAD51B 0 . . . 0.24 69.43 33 6.06 Yes 75 1.28 Yes 0 0 No -21 0.5 No 50 31.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105206096 + NM_021930 RINT1 0 . . . 1.61 78.94 24 4.47 No 51 0.77 Yes 0 0 No -23 0.71 Yes 59 45.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94152027 - NM_005591 MRE11 0 . . . 3.48 71.46 12 4.9 No 57 -4.24 No 0 0 No -26 0.73 Yes 52 63.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68736382 + NM_133509 RAD51B 0 . . . 2.83 66.76 31 4.34 No 27 1.14 Yes 0 0 No -30 0.54 No 31 95.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104169792 - NM_001100119 XRCC3 0 . . . 10.3 88.71 33 5.8 Yes 60 -2.47 No 0 0 No -29 0.66 No 49 62.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68341364 + NM_133509 RAD51B 0 . . . 6.27 80.14 18 4.9 No -2 0.37 No 0 0 No -17 0.65 No 49 67.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29089127 - NM_001005735 CHEK2 0 . . . 2.88 71.57 32 6.34 Yes 17 1.03 Yes 0 0 No -23 0.78 Yes 41 91.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190669474 + NM_000534 PMS1 0 . . . 4.44 71.62 29 6.57 Yes -2 0 No 0 0 No -28 0.74 Yes 50 90.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68592572 + NM_133509 RAD51B 0 . . . 2.45 74.3 18 4.39 No 8 0.45 No 0 0 No -24 0.31 No 50 93.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108188333 + NM_000051 ATM 0 . . . 4.39 74.56 25 4.72 No 61 1.33 Yes 0 0 No -55 0.71 Yes 34 68.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94189727 - NM_005591 MRE11 0 . . . 1.01 70.09 17 7.68 Yes 23 0.66 No 0 0 No -25 0.42 No 51 77.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47751158 + NM_000251 MSH2 0 . . . 0.45 0 28 4.56 No 14 1.42 Yes 0 0 No -51 0.36 No 44 86.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69123051 + NM_133509 RAD51B 0 . . . 7.35 80.22 19 5 No 33 0.72 No 0 0 No -18 0.48 No 48 56.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215596014 - NM_000465 BARD1 0 . . . 0.64 71.63 21 6.3 Yes 74 1.59 Yes 0 0 No -20 0.81 Yes 17 36.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68827084 + NM_133509 RAD51B 0 . . . 3.91 0 16 4.68 No 2 1.33 Yes 0 0 No -22 0.37 No 52 47.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68310055 + NM_133509 RAD51B 0 . . . 8.97 84.62 16 5.23 No 45 1.89 Yes 0 0 No -39 0.23 No 45 39.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108108504 + NM_000051 ATM 0 . . . 2.44 69.5 20 4.91 No 1 0.01 No 0 0 No -19 0.7 Yes 53 72.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32919756 + NM_000059 BRCA2 0 . . . 2.94 72.82 36 5.77 Yes 18 0.09 No 0 0 No -25 0.61 No 40 80.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108158084 + NM_000051 ATM 0 . . . 3.13 68.06 20 5.66 Yes 22 0.5 No 24 0.87 Yes -17 0.39 No 43 92.72 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 69010398 + NM_133509 RAD51B 0 . . . 7.85 83.51 9 6.56 Yes 31 1.23 Yes 0 0 No -33 0.58 No 40 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90944448 - NM_002485 NBN 0 . . . 7.46 84.92 33 7.01 Yes 53 0.62 No 0 0 No -32 0.43 No 33 68.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69104871 + NM_133509 RAD51B 0 . . . 0.27 63.04 33 5.94 Yes 74 -3.98 No 0 0 No -32 0.51 No 58 35.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108229132 + NM_000051 ATM 0 . . . 1.05 74.39 26 5.13 No 76 -3.38 No 0 0 No -25 0.76 Yes 45 73.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68442537 + NM_133509 RAD51B 0 . . . 1.42 73.83 23 5.1 No 23 0.13 No 0 0 No -26 0.42 No 26 61.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94174340 - NM_005591 MRE11 0 . . . 5.08 81.33 18 4.86 No 42 0.99 Yes 0 0 No -21 0.61 No 62 23.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41256596 - NM_007294 BRCA1 0 . . . 0.77 0 27 6.56 Yes 18 0.49 No 0 0 No -26 0.71 Yes 31 61.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90998791 - NM_002485 NBN 0 . . . 2.02 61.3 21 5.09 No 63 0.04 No 0 0 No -20 0.84 Yes 51 47.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6030266 - NM_000535 PMS2 0 . . . 11.67 76.49 87 8.53 Yes 74 0.2 No 0 0 No -16 0.45 No 45 69.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68540590 + NM_133509 RAD51B 0 . . . 7.62 85.44 20 4.88 No 20 0.65 No 0 0 No -20 0.7 Yes 43 51.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23616080 - NM_024675 PALB2 0 . . . 1.74 0 29 7.07 Yes 15 1.21 Yes 0 0 No -28 0.89 Yes 45 46.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69076392 + NM_133509 RAD51B 0 . . . 8.44 80.6 15 5.2 No NA NA NA 0 0 No -45 0.57 No 43 69.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68693953 + NM_133509 RAD51B 0 . . . 8.44 78.49 28 5.57 Yes 42 0.51 No 0 0 No -27 0.71 Yes 48 65.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68816644 + NM_004360 CDH1 0 . . . 1.98 73.51 18 4.7 No 5 1.6 Yes 0 0 No -44 0.42 No 34 49.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47635263 + NM_000251 MSH2 0 . . . 4.37 70.3 24 4.73 No 68 -3.38 No 0 0 No -24 0.49 No 36 69.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68948406 + NM_133509 RAD51B 0 . . . 1.41 0 34 6.08 Yes 66 0.14 No 0 0 No -33 0.6 No 51 26.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68381420 + NM_133509 RAD51B 0 . . . 7.53 86.44 20 5.01 No 36 1.42 Yes 0 0 No -20 0.75 Yes 45 46.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68392013 + NM_133509 RAD51B 0 . . . 2.56 0 10 5.1 No 15 0.58 No 0 0 No -40 0.71 Yes 43 88.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190698794 + NM_000534 PMS1 0 . . . 3.58 85.91 16 4.58 No 62 0.86 Yes 0 0 No -18 0.6 No 52 59.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68495867 + NM_133509 RAD51B 0 . . . 6.12 83.3 68 8.31 Yes 76 1.79 Yes 0 0 No -43 0.7 Yes 39 84.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89669474 + NM_000314 PTEN 0 . . . 5.1 78.28 19 5.74 Yes 30 -2.6 No 0 0 No -59 0.38 No 49 40.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68309364 + NM_133509 RAD51B 0 . . . 0.45 85.89 39 6.24 Yes 37 1.46 Yes 0 0 No -24 0.57 No 43 61.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190658329 + NM_000534 PMS1 0 . . . 0.66 81.05 24 5.48 No 69 -5.42 No 0 0 No -23 0.69 Yes 53 47.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59875249 - NM_032043 BRIP1 0 . . . 4.46 0 29 8.12 Yes 48 1.31 Yes 0 0 No -28 0.91 Yes 36 44.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59846792 - NM_032043 BRIP1 0 . . . 4.92 0 14 5.73 Yes 16 0.36 No 0 0 No -26 0.36 No 42 48.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68522780 + NM_133509 RAD51B 0 . . . 5.41 85.33 25 5.93 Yes 54 0.92 Yes 0 0 No -32 0.58 No 45 90.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68408126 + NM_133509 RAD51B 0 . . . 2.1 0 22 5.31 No 42 1.52 Yes 0 0 No -26 0.42 No 56 33.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68636622 + NM_133509 RAD51B 0 . . . 0.05 53.72 26 5.63 Yes 72 1.17 Yes 0 0 No -26 0.44 No 41 65.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69094364 + NM_133509 RAD51B 0 . . . 4.11 82.18 32 4.19 No 36 1.54 Yes 0 0 No -28 0.33 No 26 59.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41008273 + NM_001164269 RAD51 0 . . . 1.09 55.84 18 4.88 No 18 1.35 Yes 0 0 No -17 0.53 No 40 87.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45794198 - NM_001048171 MUTYH 0 . . . 6.54 78.5 18 4.9 No 4 0.21 No 0 0 No -23 0.55 No 47 79.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190726808 + NM_000534 PMS1 0 . . . 9.03 89.47 17 7.8 Yes 71 2.38 Yes 0 0 No -24 0.95 Yes 41 72.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68316338 + NM_133509 RAD51B 0 . . . 5.26 69.45 20 5.1 No 25 1.09 Yes 0 0 No -24 0.78 Yes 33 72.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68564095 + NM_133509 RAD51B 0 . . . 3.64 65.79 30 5.74 Yes 62 -4.3 No 0 0 No -29 0.88 Yes 48 58.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23631912 - NM_024675 PALB2 0 . . . 1.67 62.03 10 4.8 No 35 -1.02 No 0 0 No -53 0.66 No 44 64.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69088124 + NM_133509 RAD51B 0 . . . 5.29 73.63 31 4.23 No 66 1.08 Yes 0 0 No -26 0.53 No 36 58.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190701491 + NM_000534 PMS1 0 . . . 0.14 56.71 23 4.8 No 26 0.06 No 0 0 No -16 0.38 No 50 77.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47680652 + NM_000251 MSH2 0 . . . 4.92 69.62 26 5.39 No 39 1.19 Yes 0 0 No -25 0.94 Yes 42 48.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68862375 + NM_133509 RAD51B 0 . . . 4.95 72.96 20 6.78 Yes 65 0.09 No 0 0 No -19 0.71 Yes 36 66.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104183634 - NM_001100119 XRCC3 0 . . . 0.54 64.49 21 5.09 No 36 -4.05 No 0 0 No -20 0.68 Yes 35 50.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68571666 + NM_133509 RAD51B 0 . . . 2.2 75.07 25 4.89 No 44 0.2 No 0 0 No -27 0.48 No 49 94.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1214664 + NM_000455 STK11 0 . . . 0.04 0 30 5.66 Yes 51 0.92 Yes 0 0 No -29 0.45 No 57 25.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68794516 + NM_133509 RAD51B 0 . . . 3.56 68.2 32 5.45 No -2 0.11 No 0 0 No -31 0.4 No 60 28.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68435723 + NM_133509 RAD51B 0 . . . 0.89 74.6 28 6.58 Yes 62 -4.73 No 0 0 No -27 0.72 Yes 52 41.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68999031 + NM_133509 RAD51B 0 . . . 1.72 62.83 12 4.96 No 59 -5.53 No 0 0 No -22 0.39 No 52 51.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108142211 + NM_000051 ATM 0 . . . 1.56 75.61 13 4.36 No NA NA NA 0 0 No -22 0.6 No 45 43.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190663470 + NM_000534 PMS1 0 . . . 3.62 80.54 52 6.64 Yes 26 0.74 No 0 0 No -39 0.42 No 47 80.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94198608 - NM_005591 MRE11 0 . . . 5.77 83.76 24 5.14 No 10 0.31 No 0 0 No -26 0.6 No 48 84.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68740187 + NM_133509 RAD51B 0 . . . 5.16 0 54 6.95 Yes 2 0.88 Yes 0 0 No -28 0.82 Yes 56 37.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190688315 + NM_000534 PMS1 0 . . . 4.18 79.81 33 6.24 Yes 65 0.44 No 0 0 No -32 0.66 Yes 44 50.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68814475 + NM_133509 RAD51B 0 . . . 6.92 83.67 35 5.96 Yes 14 1.06 Yes 0 0 No -26 0.38 No 44 75.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68638253 + NM_133509 RAD51B 0 . . . 6.21 82.31 19 4.8 No 59 1.06 Yes 0 0 No -18 0.76 Yes 31 78.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68464775 + NM_133509 RAD51B 0 . . . 1.92 0 21 4.42 No 62 -2.97 No 0 0 No -18 0.47 No 48 49.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33442643 - NM_002878 RAD51D 0 . . . 4.46 71.63 20 5.04 No 21 1.74 Yes 0 0 No -24 0.69 Yes 37 81.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108188504 + NM_000051 ATM 0 . . . 2.04 78.33 44 7.42 Yes -2 0.47 No 0 0 No -43 0.44 No 49 84.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68601627 + NM_133509 RAD51B 0 . . . 1.29 0 25 4.51 No 24 0.94 Yes 0 0 No -24 0.7 Yes 38 40.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47665351 + NM_000251 MSH2 0 . . . 1.94 0 21 6.31 Yes 3 0.4 No 0 0 No -28 0.8 Yes 45 37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89645202 + NM_000314 PTEN 0 . . . 5.06 77.68 86 8.41 Yes 59 -1.42 No 0 0 No -35 0.56 No 50 77.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68672072 + NM_133509 RAD51B 0 . . . 2.05 63.8 22 3.89 No 7 0.57 No 0 0 No -21 0.65 No 44 73.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69102042 + NM_133509 RAD51B 0 . . . 4.84 76.64 19 5.17 No 3 0.21 No 0 0 No -28 0.5 No 34 51.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68342123 + NM_133509 RAD51B 0 . . . 1.47 74.3 15 5.65 Yes -4 0.39 No 0 0 No -25 0.83 Yes 45 77.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90952847 - NM_002485 NBN 0 . . . 9.53 85.29 14 5 No 64 -1.35 No 0 0 No -25 0.36 No 43 64.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131953686 + NM_005732 RAD50 0 . . . 1.4 70.92 39 6.23 Yes 0 0.04 No 0 0 No -32 0.51 No 42 66.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7576706 - NM_000546 TP53 0 . . . 4.78 72.7 35 6.38 Yes 63 1.17 Yes 0 0 No -34 0.5 No 46 79.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7581727 - NM_000546 TP53 0 . . . 2.08 80.19 16 5.06 No 70 0.42 No 0 0 No -41 0.49 No 44 42.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68385581 + NM_133509 RAD51B 0 . . . 2.54 0 21 4.8 No 3 0.55 No 0 0 No -20 0.88 Yes 55 61.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84385527 - NM_139076 FAM175A 0 . . . 0 72.2 19 4.6 No 6 0.51 No 0 0 No -28 0.35 No 42 73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68663912 + NM_133509 RAD51B 0 . . . 10.51 87.64 43 7.28 Yes 25 0.14 No 0 0 No -40 0.85 Yes 48 34.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56775728 + NM_058216 RAD51C 0 . . . 5.5 85.02 30 5.67 Yes 7 1.15 Yes 0 0 No -29 0.76 Yes 51 83.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47674854 + NM_000251 MSH2 0 . . . 0.39 81.72 29 6.5 Yes 75 1.02 Yes 0 0 No -34 0.37 No 51 91.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47776826 + NM_000251 MSH2 0 . . . 0.09 74.68 18 4.58 No 4 0.41 No 0 0 No -17 0.72 Yes 54 83.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68946891 + NM_133509 RAD51B 0 . . . 2.72 66.46 30 6.26 Yes 51 -1.61 No 0 0 No -27 0.35 No 47 78.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68953583 + NM_133509 RAD51B 0 . . . 3.82 72.82 22 5.29 No 6 0.83 Yes 0 0 No -43 0.66 Yes 52 50.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152370257 - NM_005431 XRCC2 0 . . . 5.13 93.66 25 5.35 No 37 0.44 No 0 0 No -32 0.37 No 41 83.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190657666 + NM_000534 PMS1 0 . . . 1.85 0 23 4.69 No 43 0.75 No 0 0 No -22 0.64 No 15 65.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68291076 + NM_133509 RAD51B 0 . . . 4.14 69.17 22 4.51 No 59 1.47 Yes 0 0 No -21 0.48 No 42 94.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68621585 + NM_133509 RAD51B 0 . . . 2.38 76.02 23 6.7 Yes 50 0.8 Yes 0 0 No -22 0.71 Yes 53 92.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29137318 - NM_001005735 CHEK2 0 . . . 0.67 61.86 16 6.08 Yes 50 -2.85 No 0 0 No -35 0.15 No 52 66.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47656559 + NM_000251 MSH2 0 . . . 6.15 91.72 19 5.88 Yes 14 0.13 No 0 0 No -18 0.58 No 44 94.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68652280 + NM_133509 RAD51B 0 . . . 3.93 72.59 13 4.91 No 52 0.16 No 0 0 No -21 0.82 Yes 43 63.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47648433 + NM_000251 MSH2 0 . . . 0.18 0 25 7.45 Yes 21 1.29 Yes 0 0 No -25 0.69 Yes 37 65.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68442914 + NM_133509 RAD51B 0 . . . 4.34 76.09 29 6.04 Yes 38 1.46 Yes 0 0 No -28 0.93 Yes 44 72.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29116500 - NM_001005735 CHEK2 0 . . . 4.79 74.29 20 5.1 No 49 0.48 No 0 0 No -45 0.95 Yes 45 56.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56807791 + NM_058216 RAD51C 0 . . . 2.46 81.44 37 6.86 Yes 11 1.65 Yes 0 0 No -22 0.47 No 47 69.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190697236 + NM_000534 PMS1 0 . . . 2.86 84 24 4.2 No 43 1.66 Yes 0 0 No -26 0.76 Yes 15 88.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68375328 + NM_133509 RAD51B 0 . . . 9.23 85.89 25 4.93 No 61 -3.96 No 0 0 No -24 0.47 No 49 85.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68386818 + NM_133509 RAD51B 0 . . . 1.19 68.23 23 4.9 No 32 0.37 No 0 0 No -26 0.5 No 36 54.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48021935 + NM_000179 MSH6 0 . . . 3.45 78.67 22 5.29 No 14 1.15 Yes 0 0 No -21 0.88 Yes 44 95.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59909151 - NM_032043 BRIP1 0 . . . 3.77 70.13 19 5.48 No 45 1.33 Yes 0 0 No -18 0.57 No 37 75.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89696310 + NM_000314 PTEN 0 . . . 2.88 74 22 5.41 No 28 1.24 Yes 0 0 No -25 0.78 Yes 21 72.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89714294 + NM_000314 PTEN 0 . . . 6.43 87.2 13 4.09 No 71 -6.62 No 0 0 No -43 0.47 No 48 47.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68846996 + NM_133509 RAD51B 0 . . . 2.54 64.25 42 6.95 Yes 42 0.87 Yes 0 0 No -23 0.38 No 43 86.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37069406 + NM_000249 MLH1 0 . . . 0.43 81.1 29 6.46 Yes 0 0.69 No 0 0 No -21 0.83 Yes 50 56.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104176006 - NM_001100119 XRCC3 0 . . . 0.29 0 18 6.93 Yes 35 0.25 No 0 0 No -17 0.71 Yes 32 29.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68907757 + NM_133509 RAD51B 0 . . . 0.99 71.87 27 5.16 No 68 0.98 Yes 0 0 No -27 0.74 Yes 47 57.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94183074 - NM_005591 MRE11 0 . . . 2.87 74.73 21 5 No 69 -5.21 No 0 0 No -20 0.84 Yes 46 72.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41263091 - NM_007294 BRCA1 0 . . . 4.28 87.46 15 4.58 No 35 1.32 Yes 0 0 No -23 0.79 Yes 23 84.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215618409 - NM_000465 BARD1 0 . . . 2.34 66.23 18 5.35 No 10 1.51 Yes 0 0 No -23 0.71 Yes 41 65.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68646253 + NM_133509 RAD51B 0 . . . 1.96 81.05 24 5.2 No 8 0.81 Yes 0 0 No -23 0.56 No 50 69.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68806242 + NM_133509 RAD51B 0 . . . 10.58 91.91 17 6.93 Yes 67 1.36 Yes 0 0 No -25 0.4 No 35 64.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89667123 + NM_000314 PTEN 0 . . . 3.79 67.48 15 5.58 Yes 14 0.56 No 0 0 No -32 0.39 No 38 60.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68558038 + NM_133509 RAD51B 0 . . . 3 0 16 4.24 No 45 -3.16 No 0 0 No -29 0.45 No 54 43.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90983352 - NM_002485 NBN 0 . . . 1.42 64.03 21 5 No 18 0.63 No 0 0 No -23 0.78 Yes 50 51.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1215529 + NM_000455 STK11 0 . . . 3.35 0 57 6.5 Yes 32 1.09 Yes 0 0 No -26 0.91 Yes 26 79.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47729471 + NM_000251 MSH2 0 . . . 3.52 71.9 14 5.33 No 76 0.54 No 0 0 No -23 0.67 Yes 41 80.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108158792 + NM_000051 ATM 0 . . . 8.64 83.58 26 6.08 Yes 53 0.45 No 0 0 No -21 0.46 No 49 80.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89662545 + NM_000314 PTEN 0 . . . 5.68 75.78 32 5.66 Yes 43 1.51 Yes 0 0 No -31 0.97 Yes 46 66.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68334712 + NM_133509 RAD51B 0 . . . 5.87 67.15 22 5 No 10 0.42 No 0 0 No -22 0.81 Yes 42 38.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90979247 - NM_002485 NBN 0 . . . 0.7 76.38 23 6.9 Yes 26 -3.04 No 0 0 No -22 0.87 Yes 43 64.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47723016 + NM_000251 MSH2 0 . . . 2.46 71.44 28 5.38 No 66 -1.91 No 0 0 No -27 0.85 Yes 44 90.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33441146 - NM_002878 RAD51D 0 . . . 0.03 68.06 15 4.84 No 52 0.86 Yes 0 0 No -18 0.67 Yes 48 80.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68745650 + NM_133509 RAD51B 0 . . . 3.41 70.18 11 3.83 No 24 0.24 No 0 0 No -58 0.36 No 46 57.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68468780 + NM_133509 RAD51B 0 . . . 0.1 63.35 37 6.39 Yes 16 0.52 No 0 0 No -36 0.24 No 34 64.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68814491 + NM_004360 CDH1 0 . . . 0.37 68.84 13 8.06 Yes 48 0.76 No 0 0 No -24 0.56 No 46 42.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47633293 + NM_000251 MSH2 0 . . . 4.47 69.96 21 4.69 No 71 0.92 Yes 0 0 No -20 0.46 No 18 93.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32960528 + NM_000059 BRCA2 0 . . . 0.43 0 21 5.2 No 70 -4.65 No 0 0 No -20 0.17 No 51 35.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68822127 + NM_004360 CDH1 0 . . . 8.68 83.39 28 6.23 Yes 35 0.9 Yes 0 0 No -27 0.6 No 23 51.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68638839 + NM_133509 RAD51B 0 . . . 6.43 78.54 22 6.18 Yes 4 0.62 No 0 0 No -21 0.54 No 47 54.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37065719 + NM_000249 MLH1 0 . . . 2.5 0 13 6 Yes 1 0.26 No 0 0 No -24 0.5 No 39 56.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32906110 + NM_000059 BRCA2 0 . . . 2.56 68.22 31 7.42 Yes 11 -2.09 No 0 0 No -30 0.92 Yes 47 73.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48035327 + NM_000179 MSH6 0 . . . 7.47 78.11 15 4.42 No 70 -6.64 No 0 0 No -45 0.33 No 44 55.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104171225 - NM_001100119 XRCC3 0 . . . 2.64 74.18 17 5.38 No NA NA NA 0 0 No -28 0.88 Yes 33 39.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68803819 + NM_133509 RAD51B 0 . . . 5.18 78.93 26 4.1 No 25 1.11 Yes 0 0 No -25 0.94 Yes 50 36.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21992775 - NM_000077 CDKN2A 0 . . . 0.33 66.13 26 4.4 No 3 0.66 No 0 0 No -25 0.92 Yes 48 75.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89680203 + NM_000314 PTEN 0 . . . 1.79 67.56 19 4.63 No 71 0.12 No 0 0 No -22 0.88 Yes 50 47.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131976349 + NM_005732 RAD50 0 . . . 6.31 77.7 20 6.58 Yes 17 -2.65 No 20 0.94 Yes -28 0.67 Yes 43 57.84 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr7 105193079 + NM_021930 RINT1 0 . . . 0.43 67.81 31 6.63 Yes 67 1.41 Yes 0 0 No -30 0.8 Yes 62 42.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94191450 - NM_005591 MRE11 0 . . . 3.16 78.44 17 5.19 No 62 0.46 No 0 0 No -21 0.66 Yes 48 75.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68361977 + NM_133509 RAD51B 0 . . . 5.99 80.64 28 5.66 Yes -1 0.49 No 0 0 No -27 0.82 Yes 48 82.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68887348 + NM_133509 RAD51B 0 . . . 2.56 64.26 33 7.37 Yes 3 0.72 No 0 0 No -26 0.65 No 47 83.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108222061 + NM_000051 ATM 0 . . . 7.76 90.84 24 6.92 Yes 11 1.22 Yes 0 0 No -23 0.7 Yes 47 83.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69015272 + NM_133509 RAD51B 0 . . . 3.3 73.11 29 6.32 Yes 52 0.29 No 0 0 No -28 0.84 Yes 43 57.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7592238 - NM_000546 TP53 0 . . . 5.35 77.79 31 4.54 No 14 -0.58 No 0 0 No -58 0.32 No 44 68.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6039364 - NM_000535 PMS2 0 . . . 2.7 76.09 26 6.59 Yes 38 1.44 Yes 0 0 No -26 0.32 No 44 55.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131920891 + NM_005732 RAD50 0 . . . 3.28 68.77 40 6.45 Yes 54 -4.34 No 0 0 No -23 0.63 No 48 72.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69039413 + NM_133509 RAD51B 0 . . . 6.01 78.11 19 4.78 No 7 1.28 Yes 0 0 No -19 0.23 No 37 96.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69011532 + NM_133509 RAD51B 0 . . . 7.67 81.21 14 5.71 Yes 12 0.3 No 0 0 No -44 0.34 No 39 55.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108183869 + NM_000051 ATM 0 . . . 8.04 81.62 23 3.91 No 7 0.83 Yes 0 0 No -22 0.85 Yes 48 59.68 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108203437 + NM_000051 ATM 0 . . . 0.92 61.63 20 7.08 Yes -1 1 Yes 0 0 No -19 0.59 No 29 77.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105202629 + NM_021930 RINT1 0 . . . 0.79 0 67 8.5 Yes 58 0.77 No 0 0 No -22 0.48 No 42 45.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94218814 - NM_005591 MRE11 0 . . . 2.44 0 28 6.29 Yes 63 -4.47 No 0 0 No -30 0.46 No 34 51.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108176752 + NM_000051 ATM 0 . . . 7.07 81.27 27 5.22 No 12 1.52 Yes 0 0 No -26 0.64 No 46 91.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68805841 + NM_133509 RAD51B 0 . . . 4.85 76.9 21 4.69 No 2 1.48 Yes 0 0 No -20 0.6 No 47 82.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41202165 - NM_007294 BRCA1 0 . . . 7.46 88.72 17 4.8 No 35 0.27 No 0 0 No -16 0.36 No 39 65.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131914405 + NM_005732 RAD50 0 . . . 7.02 80.12 25 5.2 No 9 1.23 Yes 0 0 No -24 0.88 Yes 49 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59852456 - NM_032043 BRIP1 0 . . . 6.42 67.92 24 4.23 No 6 0.45 No 0 0 No -23 0.86 Yes 52 94.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190701400 + NM_000534 PMS1 0 . . . 4.01 84.82 16 4.69 No 49 0.72 No 0 0 No -15 0.26 No 45 53.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68479071 + NM_133509 RAD51B 0 . . . 0.6 68.03 12 4.24 No 42 1.14 Yes 0 0 No -38 0.51 No 16 59.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68374888 + NM_133509 RAD51B 0 . . . 1.54 63.75 79 10.2 Yes 65 -6.36 No 0 0 No -25 0.68 Yes 42 83.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68866752 + NM_133509 RAD51B 0 . . . 2.36 70.29 15 4.47 No 36 0.77 No 0 0 No -30 0.66 No 22 61.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32895008 + NM_000059 BRCA2 0 . . . 6.2 71.22 35 6.4 Yes 21 0.93 Yes 0 0 No -34 0.88 Yes 37 76.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6046484 - NM_000535 PMS2 0 . . . 4.04 65.69 26 8.18 Yes 69 -5.93 No 0 0 No -25 0.68 Yes 49 28.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56811380 + NM_058216 RAD51C 0 . . . 6.18 64.76 30 5.39 No 61 1.67 Yes 0 0 No -27 0.74 Yes 49 78.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190676669 + NM_000534 PMS1 0 . . . 0.71 56.61 22 5.1 No 65 -5.2 No 0 0 No -19 0.45 No 45 25.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108106656 + NM_000051 ATM 0 . . . 3.96 72.67 21 5.04 No 57 0.33 No 0 0 No -20 0.5 No 39 56.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215640572 - NM_000465 BARD1 0 . . . 3.27 71.7 22 4.8 No -1 0.41 No 0 0 No -21 0.92 Yes 43 81.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68630499 + NM_133509 RAD51B 0 . . . 5.1 77.73 27 5.54 No 58 1.34 Yes 0 0 No -22 0.56 No 51 59.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131966760 + NM_005732 RAD50 0 . . . 0.62 77.68 19 3.75 No 37 0.76 No 0 0 No -18 0.19 No 50 80.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68434670 + NM_133509 RAD51B 0 . . . 6.44 83 17 5.66 Yes 6 0.1 No 0 0 No -28 0.47 No 52 61.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68966204 + NM_133509 RAD51B 0 . . . 8.24 86.66 37 6.01 Yes 23 1.68 Yes 0 0 No -36 0.63 No 46 91.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29133911 - NM_001005735 CHEK2 0 . . . 2.68 71.52 20 7.21 Yes 55 0.34 No 0 0 No -19 0.59 No 45 66.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666192 - NM_000465 BARD1 0 . . . 4.5 67.87 29 5.48 No 11 0.45 No 0 0 No -23 0.66 Yes 41 74.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68394733 + NM_133509 RAD51B 0 . . . 2.69 73.86 19 5.48 No 3 0.1 No 0 0 No -21 0.37 No 49 47.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59790021 - NM_032043 BRIP1 0 . . . 3.68 70.85 27 6.89 Yes 21 1 Yes 0 0 No -26 0.55 No 37 79.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108169397 + NM_000051 ATM 0 . . . 6.49 78.33 25 5.39 No 53 1.1 Yes 0 0 No -24 0.96 Yes 52 52.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215601373 - NM_000465 BARD1 0 . . . 0.18 72.18 28 5.48 No 60 0.55 No 0 0 No -27 0.85 Yes 35 51.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68713870 + NM_133509 RAD51B 0 . . . 6.41 74.52 21 4.25 No 76 -4.36 No 0 0 No -24 0.49 No 40 64.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33437542 - NM_002878 RAD51D 0 . . . 5.28 78.73 28 5.38 No -4 1.07 Yes 0 0 No -21 0.86 Yes 40 70.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94197476 - NM_005591 MRE11 0 . . . 0.78 69.86 25 5.1 No 73 -5.46 No 0 0 No -24 0.9 Yes 44 27.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68806197 + NM_133509 RAD51B 0 . . . 5.66 86.6 27 6.07 Yes 22 1.36 Yes 0 0 No -30 0.42 No 36 96.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59837901 - NM_032043 BRIP1 0 . . . 6.53 77.6 71 9.05 Yes 38 0.95 Yes 0 0 No -31 0.72 Yes 31 77.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68445120 + NM_133509 RAD51B 0 . . . 3.52 83.35 76 9.45 Yes 14 1.26 Yes 0 0 No -24 0.88 Yes 44 64.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68717065 + NM_133509 RAD51B 0 . . . 0.21 71.87 26 6.02 Yes 75 0.65 No 0 0 No -25 0.86 Yes 47 71.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108191244 + NM_000051 ATM 0 . . . 4.59 85.91 13 6.54 Yes 15 0.56 No 0 0 No -24 0.47 No 43 77.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68834948 + NM_004360 CDH1 0 . . . 0.92 70.48 19 4.8 No -4 0.87 Yes 0 0 No -18 0.83 Yes 54 37.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215624106 - NM_000465 BARD1 0 . . . 6 80 20 5.1 No 22 1.42 Yes 0 0 No -19 0.65 No 36 72.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68971858 + NM_133509 RAD51B 0 . . . 0.68 64.71 18 4.83 No 12 0.73 No 0 0 No -25 0.39 No 46 81.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48029588 + NM_000179 MSH6 0 . . . 3.53 85.87 21 5.07 No 3 0.79 Yes 0 0 No -28 0.66 No 50 74.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56783363 + NM_058216 RAD51C 0 . . . 5.44 82.45 35 8.43 Yes 7 0.53 No 0 0 No -28 0.83 Yes 45 62.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131933353 + NM_005732 RAD50 0 . . . 3.53 74.59 20 5.74 Yes 65 -4.56 No 0 0 No -29 0.26 No 50 62.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68727305 + NM_133509 RAD51B 0 . . . 0.7 62.03 15 5.1 No 75 -6.53 No 0 0 No -44 0.52 No 55 51.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105194192 + NM_021930 RINT1 0 . . . 3.28 0 58 7.68 Yes 18 0.83 Yes 0 0 No -57 0.33 No 39 58.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68731664 + NM_133509 RAD51B 0 . . . 3.7 65.24 25 5.57 Yes 73 -3.9 No 0 0 No -43 0.69 Yes 51 28.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108127023 + NM_000051 ATM 0 . . . 2.14 59.46 13 5.83 Yes 38 1.16 Yes 0 0 No -26 0.46 No 20 42.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94150967 - NM_005591 MRE11 0 . . . 5.99 81.84 21 5.2 No 1 1.35 Yes 0 0 No -20 0.73 Yes 48 58.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69032011 + NM_133509 RAD51B 0 . . . 5.12 86.23 21 4.5 No 59 -3.87 No 0 0 No -20 0.6 No 48 49.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90977339 - NM_002485 NBN 0 . . . 2.33 84.41 21 4.69 No 14 1.09 Yes 0 0 No -20 0.63 No 44 93.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68734231 + NM_133509 RAD51B 0 . . . 1.84 71.2 52 6.71 Yes 58 -1.27 No 0 0 No -24 0.74 Yes 47 43.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190701534 + NM_000534 PMS1 0 . . . 2.78 80.31 52 7.48 Yes 69 0.06 No 0 0 No -55 0.38 No 52 67.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108122374 + NM_000051 ATM 0 . . . 2.83 74.76 26 6.4 Yes 45 0.09 No 0 0 No -25 0.97 Yes 44 73.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47800309 + NM_000251 MSH2 0 . . . 5.17 68.92 18 4.9 No 16 -2.3 No 0 0 No -25 0.27 No 45 62.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68979501 + NM_133509 RAD51B 0 . . . 0.46 56.51 22 7.21 Yes 50 1.21 Yes 0 0 No -21 0.97 Yes 53 28.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59871552 - NM_032043 BRIP1 0 . . . 0.81 58.68 22 4.81 No 34 1.04 Yes 0 0 No -60 0.54 No 23 57.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131955967 + NM_005732 RAD50 0 . . . 1.7 73.63 15 4.24 No 76 0.36 No 0 0 No -18 0.43 No 49 66.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47683732 + NM_000251 MSH2 0 . . . 4.87 83.58 16 4.95 No 4 0.72 No 0 0 No -25 0.59 No 35 80.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59802909 - NM_032043 BRIP1 0 . . . 5.36 80.73 29 5.94 Yes 0 1.13 Yes 0 0 No -28 0.71 Yes 49 85.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68982710 + NM_133509 RAD51B 0 . . . 2.41 72.33 15 5.38 No 30 0.76 No 0 0 No -22 0.4 No 17 51.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190724620 + NM_000534 PMS1 0 . . . 1.13 70.44 33 4.95 No 38 0.89 Yes 0 0 No -32 0.48 No 20 60.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68864984 + NM_133509 RAD51B 0 . . . 1.15 69.58 30 4.36 No 69 0.63 No 0 0 No -21 0.3 No 44 40.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32934615 + NM_000059 BRCA2 0 . . . 1.08 84.22 24 5 No 76 1.49 Yes 0 0 No -23 0.79 Yes 51 31.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215656465 - NM_000465 BARD1 0 . . . 1.93 73.6 20 7.14 Yes 9 0.57 No 0 0 No -19 0.51 No 49 87.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23617626 - NM_024675 PALB2 0 . . . 7 84.8 55 8.58 Yes 32 0.98 Yes 0 0 No -29 0.62 No 50 90.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59873922 - NM_032043 BRIP1 0 . . . 2.73 73.76 28 5.57 Yes 52 -4.44 No 0 0 No -27 0.87 Yes 46 86.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68488819 + NM_133509 RAD51B 0 . . . 3.28 68.89 31 5.98 Yes 25 0.59 No 0 0 No -30 0.87 Yes 33 72.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105184750 + NM_021930 RINT1 0 . . . 0.28 66.06 16 5.15 No -1 1.07 Yes 0 0 No -18 0.31 No 42 42.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75490510 - NM_001040108 MLH3 0 . . . 4.38 78.78 11 5.48 No 51 -4.48 No 0 0 No -23 0.35 No 41 56.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32918880 + NM_000059 BRCA2 0 . . . 3.55 70.23 14 4.23 No 17 1.55 Yes 0 0 No -33 0.59 No 41 81.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68808394 + NM_004360 CDH1 0 . . . 1.9 77.77 30 5.01 No 67 -4.81 No 0 0 No -29 0.39 No 43 55.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215652977 - NM_000465 BARD1 0 . . . 1.67 68.75 29 7.68 Yes 40 0.74 No 0 0 No -28 0.95 Yes 32 55.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89706208 + NM_000314 PTEN 0 . . . 1.07 79.13 15 4.38 No 49 -3.49 No 0 0 No -19 0.33 No 47 37.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68890154 + NM_133509 RAD51B 0 . . . 4.41 82.38 22 4.69 No 17 1.17 Yes 0 0 No -21 0.7 Yes 41 77.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68294228 + NM_133509 RAD51B 0 . . . 2.86 74.75 23 4.6 No 49 1.24 Yes 0 0 No -22 0.76 Yes 20 88.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21986170 - NM_000077 CDKN2A 0 . . . 2.58 71.07 48 8.25 Yes 28 0.02 No 0 0 No -47 0.77 Yes 46 50.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152360021 - NM_005431 XRCC2 0 . . . 4.08 61.53 27 5.74 Yes 76 0.28 No 0 0 No -26 0.93 Yes 42 73.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47687693 + NM_000251 MSH2 0 . . . 4.42 70.49 35 4.78 No 70 0.31 No 0 0 No -27 0.63 No 42 84.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47696209 + NM_000251 MSH2 0 . . . 0.37 78.4 18 5.48 No 5 0.63 No 0 0 No -17 0.4 No 53 56.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68526715 + NM_133509 RAD51B 0 . . . 7.36 75.38 15 5.66 Yes 1 0.51 No 0 0 No -22 0.46 No 45 68.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152366172 - NM_005431 XRCC2 0 . . . 5.7 75.5 19 5 No -4 1.16 Yes 0 0 No -26 0.58 No 43 66.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89693736 + NM_000314 PTEN 0 . . . 0.3 65.02 25 5.29 No 41 0.56 No 0 0 No -24 0.67 Yes 27 55.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94212328 - NM_005591 MRE11 0 . . . 0.57 66.16 29 5.92 Yes 43 1.08 Yes 0 0 No -28 0.91 Yes 15 74.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84394035 - NM_139076 FAM175A 0 . . . 1.78 79.27 21 5.18 No 67 -3.78 No 0 0 No -20 0.74 Yes 46 63.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89638475 + NM_000314 PTEN 0 . . . 5.14 70.29 19 4.88 No 68 1.3 Yes 0 0 No -18 0.69 Yes 40 49.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47724630 + NM_000251 MSH2 0 . . . 3.43 84.22 18 5.34 No 76 1.25 Yes 0 0 No -20 0.83 Yes 50 87.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131933760 + NM_005732 RAD50 0 . . . 2.13 84.41 12 5.1 No 13 0.59 No 0 0 No -24 0.35 No 45 84.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131912609 + NM_005732 RAD50 0 . . . 9.67 73.3 17 4.79 No 45 0.76 No 0 0 No -19 0.48 No 48 83.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94199519 - NM_005591 MRE11 0 . . . 4.79 0 30 6 Yes 76 1.16 Yes 0 0 No -29 0.52 No 35 83.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33446749 - NM_002878 RAD51D 0 . . . 8.88 84.84 28 4.25 No 43 1.34 Yes 26 0.83 Yes -27 0.44 No 39 71.86 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr14 68710759 + NM_133509 RAD51B 0 . . . 3.85 75.51 32 5.72 Yes 52 1.5 Yes 0 0 No -32 0.5 No 32 59.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69041597 + NM_133509 RAD51B 0 . . . 1.79 73.59 19 5.83 Yes 60 -3.86 No 0 0 No -30 0.82 Yes 45 69.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69109087 + NM_133509 RAD51B 0 . . . 5 84.34 31 6.08 Yes 4 0.5 No 0 0 No -30 0.75 Yes 46 73.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68856567 + NM_133509 RAD51B 0 . . . 1.45 73.56 25 4.9 No -4 0.65 No 0 0 No -24 0.82 Yes 47 34.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41274416 - NM_007294 BRCA1 0 . . . 2.58 78.35 19 3.79 No 74 1.06 Yes 0 0 No -25 0.72 Yes 50 83.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68874269 + NM_133509 RAD51B 0 . . . 5.04 83.4 23 4.67 No 72 0.61 No 0 0 No -23 0.63 No 41 54.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131916414 + NM_005732 RAD50 0 . . . 1.78 65.9 24 5.99 Yes 2 0.58 No 0 0 No -23 0.34 No 42 76.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68364550 + NM_133509 RAD51B 0 . . . 5.12 85.02 45 6.99 Yes 6 1.12 Yes 0 0 No -31 0.35 No 52 83.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68935053 + NM_133509 RAD51B 0 . . . 0.33 73.38 25 4.73 No 33 0.84 Yes 0 0 No -24 0.89 Yes 48 75.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41244587 - NM_007294 BRCA1 0 . . . 3 79.67 16 4.58 No 54 -2.07 No 0 0 No -16 0.33 No 46 57.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48019030 + NM_000179 MSH6 0 . . . 5.93 91.47 9 3.87 No 63 -2.49 No 0 0 No -22 0.64 No 23 63.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32918204 + NM_000059 BRCA2 0 . . . 3.69 76.94 17 5.44 No 39 1.09 Yes 0 0 No -30 0.54 No 46 63.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215617880 - NM_000465 BARD1 0 . . . 6.88 76.91 32 6.46 Yes 67 0.34 No 0 0 No -35 0.47 No 44 59.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75488795 - NM_001040108 MLH3 0 . . . 3.73 71.76 31 7.2 Yes 38 0.92 Yes 0 0 No -30 0.38 No 47 81.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94164588 - NM_005591 MRE11 0 . . . 6.19 86.17 47 7.28 Yes 64 -5.16 No 0 0 No -46 0.52 No 48 70.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56768333 + NM_058216 RAD51C 0 . . . 3.02 82.49 18 6.9 Yes 63 0.71 No 0 0 No -31 0.37 No 50 76.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131922351 + NM_005732 RAD50 0 . . . 1.2 60.57 27 5.74 Yes 62 -4.99 No 0 0 No -54 0.8 Yes 36 24.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68726292 + NM_133509 RAD51B 0 . . . 6.76 83.39 22 5 No 16 0.13 No 0 0 No -21 0.79 Yes 42 83.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59762245 - NM_032043 BRIP1 0 . . . 0.86 77.18 19 5.38 No 67 0.92 Yes 0 0 No -18 0.68 Yes 48 68.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90980386 - NM_002485 NBN 0 . . . 0.78 84.22 19 5 No 33 1.13 Yes 0 0 No -26 0.66 No 50 74.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47698924 + NM_000251 MSH2 0 . . . 3 80.05 15 5.07 No 73 -4.34 No 0 0 No -21 0.83 Yes 47 76.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37059283 + NM_000249 MLH1 0 . . . 3.46 76.45 23 5.92 Yes -3 0.42 No 0 0 No -22 0.64 No 49 65.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37061031 + NM_000249 MLH1 0 . . . 3.11 73.29 24 4.65 No 15 1.5 Yes 0 0 No -19 0.5 No 43 64.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89708109 + NM_000314 PTEN 0 . . . 5.58 78.67 13 5.45 No 17 1.67 Yes 0 0 No -21 0.35 No 41 92.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47685992 + NM_000251 MSH2 0 . . . 3.51 80.51 29 5.38 No 8 0.83 Yes 0 0 No -28 0.81 Yes 50 92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94161040 - NM_005591 MRE11 0 . . . 6.31 87.79 38 6.56 Yes 52 1.41 Yes 0 0 No -38 0.48 No 22 39.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68739202 + NM_133509 RAD51B 0 . . . 0.29 62.5 15 5.96 Yes 58 1.02 Yes 0 0 No -26 0.58 No 12 43.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1214746 + NM_000455 STK11 0 . . . 4.98 84.61 28 6.6 Yes 53 1.49 Yes 0 0 No -28 0.46 No 37 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68839270 + NM_004360 CDH1 0 . . . 1.26 0 22 5.28 No 18 0.4 No 0 0 No -52 0.42 No 40 39.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68711226 + NM_133509 RAD51B 0 . . . 2.52 80.94 21 4.47 No 7 0.46 No 0 0 No -30 0.72 Yes 51 66.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40997261 + NM_001164269 RAD51 0 . . . 0.71 80.65 26 7.66 Yes 22 0.75 No 0 0 No -25 0.89 Yes 25 53.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59891827 - NM_032043 BRIP1 0 . . . 0.35 0 25 4.9 No 63 0.43 No 0 0 No -24 0.91 Yes 49 60.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68628965 + NM_133509 RAD51B 0 . . . 1.8 69.46 28 5.46 No 17 0.53 No 0 0 No -27 0.83 Yes 41 96.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190647417 + NM_000534 PMS1 0 . . . 0.07 70.89 34 6.98 Yes 29 1.56 Yes 0 0 No -33 0.71 Yes 49 46.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41210763 - NM_007294 BRCA1 0 . . . 3.86 76.16 33 5.81 Yes 52 1.83 Yes 0 0 No -32 0.68 Yes 36 54.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6029165 - NM_000535 PMS2 0 . . . 0.84 0 31 7.4 Yes 40 0.72 No 0 0 No -24 0.57 No 18 58.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69046212 + NM_133509 RAD51B 0 . . . 0.35 52.94 21 5.66 Yes 71 1.14 Yes 0 0 No -20 0.69 Yes 51 44.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59794108 - NM_032043 BRIP1 0 . . . 0.04 64.46 21 5.1 No -3 0.06 No 0 0 No -27 0.85 Yes 61 22.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56793986 + NM_058216 RAD51C 0 . . . 0.23 68.84 28 5.34 No 52 1.23 Yes 0 0 No -22 0.56 No 48 77.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21976397 - NM_000077 CDKN2A 0 . . . 2.64 70.68 49 7.36 Yes 15 -2.38 No 0 0 No -46 0.41 No 48 73.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6028079 - NM_000535 PMS2 0 . . . 7.22 76.11 16 5.83 Yes 5 1.11 Yes 0 0 No -46 0.41 No 40 74.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69051766 + NM_133509 RAD51B 0 . . . 7.94 82.28 33 5.14 No 23 1 Yes 0 0 No -24 0.8 Yes 47 97.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152359524 - NM_005431 XRCC2 0 . . . 8.61 80.5 16 4 No 32 0.12 No 0 0 No -26 0.62 No 48 81.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69148019 + NM_133509 RAD51B 0 . . . 0.24 72.34 29 5.92 Yes 67 -3.23 No 0 0 No -28 0.8 Yes 49 27.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29102661 - NM_001005735 CHEK2 0 . . . 3.68 70.85 34 7.52 Yes 23 1.59 Yes 0 0 No -28 0.73 Yes 40 71.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32906562 + NM_000059 BRCA2 0 . . . 6.79 80.16 28 6.42 Yes 25 0.22 No 0 0 No -30 0.66 No 49 75.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68650058 + NM_133509 RAD51B 0 . . . 0.83 0 17 3.65 No 2 0.41 No 0 0 No -23 0.78 Yes 40 40.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59910867 - NM_032043 BRIP1 0 . . . 5.96 85.23 41 6.68 Yes 5 1.28 Yes 0 0 No -40 0.41 No 53 83.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68706223 + NM_133509 RAD51B 0 . . . 8.76 83.38 19 5.42 No 24 1.08 Yes 0 0 No -23 0.8 Yes 48 32.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68877825 + NM_133509 RAD51B 0 . . . 0.4 69.79 24 4.03 No 25 0.9 Yes 0 0 No -26 0.65 No 20 45.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68897808 + NM_133509 RAD51B 0 . . . 3.77 77.56 18 4.88 No 7 0.56 No 0 0 No -42 0.77 Yes 33 59.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41023657 + NM_001164269 RAD51 0 . . . 6.3 68.3 22 5.1 No 52 1.11 Yes 0 0 No -21 0.86 Yes 45 43.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68980469 + NM_133509 RAD51B 0 . . . 1.37 62.54 22 5.2 No 18 1.9 Yes 0 0 No -21 0.32 No 40 85.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215674364 - NM_000465 BARD1 0 . . . 2.16 79.28 32 5.8 Yes NA NA NA 0 0 No -31 0.75 Yes 54 30.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47760334 + NM_000251 MSH2 0 . . . 2.24 80.12 75 8.77 Yes 7 1.16 Yes 0 0 No -36 0.33 No 51 72.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45807660 - NM_001048171 MUTYH 0 . . . 1.3 74.55 19 4.9 No 11 0.7 No 0 0 No -18 0.81 Yes 44 61.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69001534 + NM_133509 RAD51B 0 . . . 3.49 72.22 26 6.08 Yes 76 0.16 No 0 0 No -25 0.67 Yes 45 70.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7574593 - NM_000546 TP53 0 . . . 2.59 62.8 25 6.03 Yes 45 0.18 No 0 0 No -24 0.84 Yes 50 27.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68514663 + NM_133509 RAD51B 0 . . . 3.18 60.98 102 7.81 Yes 5 0.12 No 0 0 No -33 0.75 Yes 46 57.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37064293 + NM_000249 MLH1 0 . . . 4.33 67.69 28 5.46 No 18 0.93 Yes 0 0 No -27 0.57 No 40 89.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69131038 + NM_133509 RAD51B 0 . . . 0.07 62.96 10 5.14 No 68 2.18 Yes 0 0 No -20 0.39 No 62 36.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47694664 + NM_000251 MSH2 0 . . . 4.21 81.49 18 4.8 No 52 0.73 No 0 0 No -21 0.66 Yes 46 70.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68680132 + NM_133509 RAD51B 0 . . . 4.1 69.23 31 7.67 Yes 58 1.15 Yes 0 0 No -30 0.72 Yes 44 62.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94228735 - NM_005591 MRE11 0 . . . 0.8 69.35 21 5.23 No 76 -5.47 No 0 0 No -28 0.49 No 52 52.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47736599 + NM_000251 MSH2 0 . . . 2.87 77.04 28 6.59 Yes 66 -2.06 No 0 0 No -27 0.76 Yes 17 56.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75484047 - NM_001040108 MLH3 0 . . . 0.76 74.26 16 3.78 No 37 1.28 Yes 0 0 No -34 0.72 Yes 21 86.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84383118 - NM_139076 FAM175A 0 . . . 2.62 78.75 26 7.58 Yes 0 0.7 No 0 0 No -25 0.76 Yes 53 40.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32914922 + NM_000059 BRCA2 0 . . . 1.89 0 28 5.29 No 59 -4.58 No 0 0 No -27 0.52 No 47 60.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89643398 + NM_000314 PTEN 0 . . . 2.93 73.71 28 5.48 No 64 0.66 No 0 0 No -27 0.68 Yes 56 18.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41249510 - NM_007294 BRCA1 0 . . . 0.41 80.49 24 6.16 Yes 37 1.58 Yes 0 0 No -23 0.74 Yes 21 64.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47680575 + NM_000251 MSH2 0 . . . 1.38 68.21 26 6.4 Yes 8 1.24 Yes 0 0 No -25 0.78 Yes 50 73.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215598030 - NM_000465 BARD1 0 . . . 1.56 73.07 22 5.74 Yes 22 0.17 No 0 0 No -26 0.5 No 29 46.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131914565 + NM_005732 RAD50 0 . . . 0.15 63.01 15 4.4 No 26 0.66 No 0 0 No -21 0.84 Yes 48 17.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68882984 + NM_133509 RAD51B 0 . . . 4.98 80.34 10 3.44 No 12 0.99 Yes 0 0 No -26 0.4 No 46 96.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190694012 + NM_000534 PMS1 0 . . . 5.43 64.95 29 5.47 No 72 0.53 No 0 0 No -28 0.66 No 53 33.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59813337 - NM_032043 BRIP1 0 . . . 4.25 84.04 27 6.02 Yes 8 0.94 Yes 0 0 No -22 0.65 No 50 56.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108173812 + NM_000051 ATM 0 . . . 5.1 80.52 37 6.45 Yes 4 1.23 Yes 0 0 No -36 0.89 Yes 40 57.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29124389 - NM_001005735 CHEK2 0 . . . 5.03 71.29 36 3.84 No 18 0.72 No 0 0 No -25 0.45 No 40 69.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152366876 - NM_005431 XRCC2 0 . . . 2.4 75.7 16 5.04 No 66 0.98 Yes 0 0 No -20 0.77 Yes 53 65.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68776536 + NM_004360 CDH1 0 . . . 5.72 90.92 33 6.08 Yes 72 -4.51 No 0 0 No -28 0.46 No 42 87.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68722357 + NM_133509 RAD51B 0 . . . 3.59 77.21 17 4.69 No -4 0.87 Yes 0 0 No -16 0.29 No 49 79.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68696931 + NM_133509 RAD51B 0 . . . 0.19 76.52 21 6.74 Yes 43 1.02 Yes 0 0 No -20 0.77 Yes 47 51.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104169154 - NM_001100119 XRCC3 0 . . . 4.79 79.91 24 5.48 No 43 -3.43 No 0 0 No -23 0.73 Yes 50 32.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68594085 + NM_133509 RAD51B 0 . . . 5.51 79.65 36 6.15 Yes 64 1.19 Yes 0 0 No -31 0.66 No 40 91.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105181768 + NM_021930 RINT1 0 . . . 1.76 80.12 28 4.62 No 67 0.7 No 0 0 No -27 0.66 No 50 63.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68406909 + NM_133509 RAD51B 0 . . . 2.78 84.99 11 4.48 No 76 1.32 Yes 0 0 No -23 0.49 No 50 65.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131906847 + NM_005732 RAD50 0 . . . 1.85 80.37 18 4.76 No 72 0.79 Yes 0 0 No -47 0.78 Yes 47 60.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108207912 + NM_000051 ATM 0 . . . 5.46 85.02 23 5.41 No 8 0.45 No 0 0 No -26 0.85 Yes 50 86.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21989193 - NM_000077 CDKN2A 0 . . . 0.59 66.02 24 4.85 No 38 -1.21 No 0 0 No -23 0.29 No 21 31.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89631115 + NM_000314 PTEN 0 . . . 1.61 0 10 5.1 No 22 1.32 Yes 0 0 No -23 0.57 No 36 83.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37075840 + NM_000249 MLH1 0 . . . 4.11 76.97 18 4.77 No 49 0.65 No 0 0 No -22 0.65 No 38 67.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68515044 + NM_133509 RAD51B 0 . . . 3.61 0 18 4.9 No 36 0.7 No 0 0 No -43 0.72 Yes 22 90.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68783750 + NM_004360 CDH1 0 . . . 5.81 80.66 34 6.71 Yes 58 1.28 Yes 0 0 No -17 0.41 No 43 64.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68456445 + NM_133509 RAD51B 0 . . . 4.14 79.5 17 5.57 Yes 34 -4.65 No 0 0 No -16 0.74 Yes 36 87.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68961267 + NM_133509 RAD51B 0 . . . 2.84 0 20 5.57 Yes 2 0.95 Yes 0 0 No -19 0.68 Yes 49 50.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68977881 + NM_133509 RAD51B 0 . . . 4.33 69.88 29 6.23 Yes 60 -4.98 No 0 0 No -28 0.65 No 45 62.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68604010 + NM_133509 RAD51B 0 . . . 2.09 70.16 22 6.45 Yes -2 0.03 No 0 0 No -21 0.72 Yes 45 63.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52438313 - NM_004656 BAP1 0 . . . 4.56 70.84 39 6.16 Yes 70 -4.93 No 0 0 No -35 0.38 No 51 33.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215653322 - NM_000465 BARD1 0 . . . 3.97 62.32 14 4.36 No 15 1.44 Yes 0 0 No -35 0.31 No 43 90.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21980570 - NM_000077 CDKN2A 0 . . . 2.68 67.9 20 5.1 No -1 0.7 No 0 0 No -24 0.54 No 45 38.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47797975 + NM_000251 MSH2 0 . . . 1.63 75.09 47 6.35 Yes 14 -1.67 No 0 0 No -26 0.54 No 44 39.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47747008 + NM_000251 MSH2 0 . . . 3.11 76.32 29 6.72 Yes 44 1 Yes 0 0 No -28 0.68 Yes 22 51.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68760226 + NM_133509 RAD51B 0 . . . 8.1 69.59 20 6.59 Yes 18 0.89 Yes 0 0 No -19 0.79 Yes 37 63.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59879222 - NM_032043 BRIP1 0 . . . 6.19 76.2 16 4.47 No 2 1.58 Yes 0 0 No -16 0.42 No 41 83.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90950485 - NM_002485 NBN 0 . . . 7.99 83.88 20 5.57 Yes 61 0.78 Yes 0 0 No -19 0.51 No 39 81.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68546605 + NM_133509 RAD51B 0 . . . 0.96 64.4 22 5.29 No 26 1.05 Yes 0 0 No -21 0.52 No 32 90.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68936440 + NM_133509 RAD51B 0 . . . 0.3 70.21 15 5.17 No 19 0.72 No 0 0 No -28 0.41 No 35 79.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37037181 + NM_000249 MLH1 0 . . . 0.57 71.65 25 5.29 No 72 0.82 Yes 0 0 No -25 0.73 Yes 43 82.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59893913 - NM_032043 BRIP1 0 . . . 2.96 73.37 23 5.1 No 22 0.67 No 0 0 No -22 0.81 Yes 45 67.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215655074 - NM_000465 BARD1 0 . . . 0.15 0 15 4.47 No 52 -2.75 No 0 0 No -24 0.39 No 48 70.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69118953 + NM_133509 RAD51B 0 . . . 2.99 0 16 5.48 No 67 0.56 No 0 0 No -25 0.45 No 49 37.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21993969 - NM_000077 CDKN2A 0 . . . 3.23 82.06 10 4 No 47 0.38 No 0 0 No -27 0.88 Yes 51 75.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59867739 - NM_032043 BRIP1 0 . . . 3.25 80.12 19 5.57 Yes 8 1.2 Yes 0 0 No -28 0.39 No 50 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29120053 - NM_001005735 CHEK2 0 . . . 1.78 74.63 64 8.61 Yes 66 0.53 No 0 0 No -20 0.65 No 49 52.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68932382 + NM_133509 RAD51B 0 . . . 2.14 70.47 26 7.05 Yes 71 0.14 No 0 0 No -25 0.78 Yes 34 68.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68843559 + NM_004360 CDH1 0 . . . 4.13 72.82 19 4.36 No 76 -2.79 No 0 0 No -19 0.77 Yes 45 61.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68736694 + NM_133509 RAD51B 0 . . . 0.65 63.86 37 4.44 No 51 -4.01 No 0 0 No -19 0.24 No 45 70.71 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21966211 - NM_000077 CDKN2A 0 . . . 8.4 87.62 21 3.85 No 0 0.97 Yes 0 0 No -24 0.81 Yes 34 79.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94160899 - NM_005591 MRE11 0 . . . 2.42 76.42 18 4.9 No 18 0.95 Yes 0 0 No -17 0.3 No 46 87.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190704209 + NM_000534 PMS1 0 . . . 3.1 69.89 35 8.01 Yes 27 0.44 No 0 0 No -34 0.82 Yes 52 44.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152371153 - NM_005431 XRCC2 0 . . . 2.09 60.34 15 5.39 No -2 0.01 No 0 0 No -51 0.82 Yes 44 68.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68300520 + NM_133509 RAD51B 0 . . . 5.83 65.35 16 4.69 No 68 -4.51 No 0 0 No -17 0.61 No 51 50.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69041015 + NM_133509 RAD51B 0 . . . 4.31 82.03 28 5.38 No 2 1.27 Yes 0 0 No -27 0.89 Yes 48 54.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108156487 + NM_000051 ATM 0 . . . 0.42 0 26 4.98 No 15 0.18 No 0 0 No -24 0.59 No 43 69.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68302066 + NM_133509 RAD51B 0 . . . 0.78 0 21 5.1 No 57 -3.59 No 0 0 No -20 0.83 Yes 41 83.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47736768 + NM_000251 MSH2 0 . . . 3.08 79.74 32 6.1 Yes 5 0.33 No 0 0 No -31 0.5 No 49 68.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131915680 + NM_005732 RAD50 0 . . . 2.38 0 42 6.48 Yes 65 -5.77 No 0 0 No -33 0.45 No 56 18.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41223413 - NM_007294 BRCA1 0 . . . 10.94 90.3 15 4.63 No 8 0.49 No 0 0 No -28 0.3 No 47 91.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33438180 - NM_002878 RAD51D 0 . . . 5.92 82.31 31 4.25 No 60 1.82 Yes 0 0 No -19 0.55 No 43 48.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215635440 - NM_000465 BARD1 0 . . . 1.91 0 12 4.9 No 0 -0.27 No 0 0 No -18 0.34 No 44 60.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29107332 - NM_001005735 CHEK2 0 . . . 7.43 71.37 21 5.57 Yes 70 1.39 Yes 0 0 No -21 0.67 Yes 40 51.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32950974 + NM_000059 BRCA2 0 . . . 1.12 71.17 38 5.99 Yes 75 -6.47 No 0 0 No -21 0.46 No 50 46.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68498666 + NM_133509 RAD51B 0 . . . 0.75 74.86 19 6.55 Yes 40 0.9 Yes 0 0 No -18 0.66 No 18 63.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68468677 + NM_133509 RAD51B 0 . . . 4.85 68.5 15 4.34 No 0 0.71 No 0 0 No -28 0.46 No 41 66.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108135453 + NM_000051 ATM 0 . . . 2.93 71.09 21 5.97 Yes 76 -3.24 No 0 0 No -20 0.75 Yes 54 57.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68819999 + NM_004360 CDH1 0 . . . 0.64 0 20 4.26 No 17 1.09 Yes 0 0 No -26 0.36 No 41 89.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75486111 - NM_001040108 MLH3 0 . . . 3.6 84.41 35 6.71 Yes 29 2.14 Yes 0 0 No -35 0.6 No 29 86.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56797297 + NM_058216 RAD51C 0 . . . 1.42 72.26 13 7.69 Yes 30 1.02 Yes 0 0 No -33 0.66 Yes 28 54.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32963293 + NM_000059 BRCA2 0 . . . 0.6 70.69 24 5.91 Yes 46 -2.66 No 0 0 No -19 0.53 No 45 76.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48009451 + NM_000179 MSH6 0 . . . 1.7 64.93 18 4.02 No 23 1.49 Yes 0 0 No -26 0.24 No 45 42.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108141158 + NM_000051 ATM 0 . . . 2.38 65.35 23 4.06 No 12 0.59 No 0 0 No -24 0.31 No 43 53.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69038157 + NM_133509 RAD51B 0 . . . 1.76 0 17 7.06 Yes 62 -1.05 No 0 0 No -27 0.62 No 39 47.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108201707 + NM_000051 ATM 0 . . . 1.28 0 16 4.69 No 64 -5.05 No 0 0 No -27 0.39 No 40 77.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108228280 + NM_000051 ATM 0 . . . 8.14 81.99 14 5 No 21 0.81 Yes 0 0 No -19 0.77 Yes 45 59.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56777305 + NM_058216 RAD51C 0 . . . 8.62 89.48 29 5.38 No 9 0.62 No 0 0 No -28 0.88 Yes 49 93.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47681947 + NM_000251 MSH2 0 . . . 5.8 75.36 21 4.98 No 6 1.55 Yes 0 0 No -45 0.77 Yes 52 68.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104165242 - NM_001100119 XRCC3 0 . . . 2.58 74.9 9 6.73 Yes 64 -3.74 No 0 0 No -49 0.51 No 16 24.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68426881 + NM_133509 RAD51B 0 . . . 3.77 72.01 23 5.83 Yes 22 -2.03 No 0 0 No -14 0.44 No 49 30.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68886517 + NM_133509 RAD51B 0 . . . 0.14 69.62 21 5.36 No 55 0.33 No 0 0 No -21 0.44 No 43 77.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94154838 - NM_005591 MRE11 0 . . . 3.7 69.14 22 3.89 No 60 1.43 Yes 0 0 No -21 0.83 Yes 51 84.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68925483 + NM_133509 RAD51B 0 . . . 6.49 80.05 19 5 No -2 1.24 Yes 0 0 No -55 0.73 Yes 45 91.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90952360 - NM_002485 NBN 0 . . . 0.32 79.59 22 5.1 No 4 0.71 No 0 0 No -21 0.87 Yes 50 50.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68304680 + NM_133509 RAD51B 0 . . . 5.55 78 18 4.36 No 23 1.62 Yes 0 0 No -47 0.65 No 35 85.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68887728 + NM_133509 RAD51B 0 . . . 0.6 54.71 36 5.56 Yes 35 0.79 Yes 0 0 No -21 0.39 No 33 86.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68397302 + NM_133509 RAD51B 0 . . . 3.14 0 32 7.07 Yes 56 1.27 Yes 0 0 No -31 0.9 Yes 52 86.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68644399 + NM_133509 RAD51B 0 . . . 5.27 79.43 26 5.2 No 9 0.32 No 0 0 No -23 0.4 No 44 52.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108184655 + NM_000051 ATM 0 . . . 4.71 81.85 21 4.65 No 8 0.5 No 0 0 No -27 0.55 No 50 48.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152368136 - NM_005431 XRCC2 0 . . . 2.75 79.63 10 5.2 No 4 0.75 No 0 0 No -57 0.42 No 49 68.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90971963 - NM_002485 NBN 0 . . . 2.25 0 45 6.62 Yes 44 0.59 No 0 0 No -18 0.49 No 39 85.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68348784 + NM_133509 RAD51B 0 . . . 4.64 86.26 18 5.62 Yes 52 1.64 Yes 0 0 No -22 0.91 Yes 49 86.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68610422 + NM_133509 RAD51B 0 . . . 9.15 87.11 26 5.57 Yes 4 1.65 Yes 0 0 No -28 0.69 Yes 36 72.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47630095 + NM_000251 MSH2 0 . . . 4.53 68.53 33 6.24 Yes 62 -4.87 No 0 0 No -32 0.74 Yes 36 52.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190652901 + NM_000534 PMS1 0 . . . 0.53 74.93 21 5.04 No 4 0.79 Yes 0 0 No -28 0.53 No 48 41.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59896735 - NM_032043 BRIP1 0 . . . 0.79 59.46 14 4 No 16 1.29 Yes 0 0 No -22 0.64 No 42 90.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215611621 - NM_000465 BARD1 0 . . . 4.77 66.17 22 5.66 Yes 1 0.06 No 0 0 No -21 0.66 No 44 59.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190711772 + NM_000534 PMS1 0 . . . 5.24 80.12 26 5.65 Yes 7 1.21 Yes 0 0 No -30 0.54 No 51 66.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69101313 + NM_133509 RAD51B 0 . . . 1.63 0 42 6.45 Yes 18 0.94 Yes 0 0 No -18 0.59 No 40 85.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190683310 + NM_000534 PMS1 0 . . . 5.16 78.94 19 5 No 62 0.93 Yes 0 0 No -21 0.8 Yes 53 33.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190700804 + NM_000534 PMS1 0 . . . 1.83 80.49 34 6.17 Yes 31 0.78 Yes 0 0 No -33 0.63 No 44 69.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59828059 - NM_032043 BRIP1 0 . . . 4.75 76.49 11 5 No 38 0.76 No 0 0 No -46 0.39 No 31 89.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32918556 + NM_000059 BRCA2 0 . . . 6.57 74.6 11 5 No 10 1.83 Yes 0 0 No -26 0.35 No 48 84.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69043357 + NM_133509 RAD51B 0 . . . 3.39 76.03 24 4.93 No 63 -3.81 No 0 0 No -24 0.73 Yes 49 72.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68866580 + NM_133509 RAD51B 0 . . . 5.3 74.74 17 4.59 No 69 -5.98 No 0 0 No -59 0.61 No 50 52.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90961337 - NM_002485 NBN 0 . . . 5.69 83.94 32 6.91 Yes 45 2 Yes 0 0 No -31 0.86 Yes 47 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59773247 - NM_032043 BRIP1 0 . . . 2.11 73.68 13 5.44 No 16 -3.05 No 0 0 No -23 0.57 No 42 52.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89725821 + NM_000314 PTEN 0 . . . 5.16 75.05 82 8.33 Yes 49 0.32 No 0 0 No -34 0.71 Yes 52 62.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68600742 + NM_133509 RAD51B 0 . . . 5.79 66.46 19 4.8 No 24 1.19 Yes 0 0 No -19 0.69 Yes 38 60.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6032901 - NM_000535 PMS2 0 . . . 0.78 84.22 24 6.93 Yes 33 1.08 Yes 0 0 No -23 0.59 No 50 48.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59926054 - NM_032043 BRIP1 0 . . . 0.09 0 17 5.57 Yes -2 0.81 Yes 0 0 No -24 0.74 Yes 41 56.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21989261 - NM_000077 CDKN2A 0 . . . 2.01 75.71 15 4.99 No 70 -5.18 No 0 0 No -26 0.35 No 46 70.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104164117 - NM_001100119 XRCC3 0 . . . 2.61 81.02 28 5.38 No 37 -2.67 No 0 0 No -28 0.36 No 51 35.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75488167 - NM_001040108 MLH3 0 . . . 4.83 74.85 25 5.37 No 47 1.07 Yes 0 0 No -28 0.75 Yes 32 91.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68678286 + NM_133509 RAD51B 0 . . . 2.61 70.37 42 5.83 Yes 30 -2.96 No 0 0 No -41 0.72 Yes 46 57.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37092933 + NM_000249 MLH1 0 . . . 3 79.89 16 3.32 No 1 0.8 Yes 0 0 No -22 0.71 Yes 52 59.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69009411 + NM_133509 RAD51B 0 . . . 8.42 86.37 23 5.39 No 11 0.78 Yes 0 0 No -22 0.7 Yes 46 83.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47759920 + NM_000251 MSH2 0 . . . 7.34 75.85 29 5.3 No 61 -3.25 No 0 0 No -28 0.44 No 42 61.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131909810 + NM_005732 RAD50 0 . . . 4.03 0 32 4.82 No 17 0.23 No 0 0 No -31 0.66 No 49 50.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21989239 - NM_000077 CDKN2A 0 . . . 2.11 0 25 5.06 No 71 -2.07 No 0 0 No -24 0.82 Yes 48 64.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69048801 + NM_133509 RAD51B 0 . . . 1.5 76.11 13 5.98 Yes 69 -5.58 No 0 0 No -32 0.43 No 54 26.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94156516 - NM_005591 MRE11 0 . . . 2.23 77.79 21 5.74 Yes 72 -1.95 No 0 0 No -20 0.86 Yes 53 56.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68316018 + NM_133509 RAD51B 0 . . . 4.48 83.17 22 6.1 Yes 67 0.79 Yes 0 0 No -25 0.83 Yes 35 58.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68655199 + NM_133509 RAD51B 0 . . . 5.36 76.36 29 5.48 No 22 -1.91 No 0 0 No -28 0.87 Yes 41 50.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89664160 + NM_000314 PTEN 0 . . . 3.15 75.11 18 4.1 No 61 0.86 Yes 0 0 No -51 0.71 Yes 43 88.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7579332 - NM_000546 TP53 0 . . . 5.16 70.47 16 5.48 No 62 0.46 No 0 0 No -26 0.69 Yes 34 65.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108240043 + NM_000051 ATM 0 . . . 1.09 67.29 16 6.02 Yes 49 -3.41 No 0 0 No -34 0.56 No 49 62.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69110178 + NM_133509 RAD51B 0 . . . 4.18 78.7 20 5.91 Yes 66 0.76 No 0 0 No -21 0.73 Yes 37 80.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89649597 + NM_000314 PTEN 0 . . . 6.55 86.87 25 3.38 No 32 0.72 No 0 0 No -24 0.72 Yes 49 61.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68418876 + NM_133509 RAD51B 0 . . . 5.55 0 34 5.03 No 66 1.16 Yes 0 0 No -22 0.49 No 53 77.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59937944 - NM_032043 BRIP1 0 . . . 4.41 85.65 14 6 Yes 52 1.47 Yes 0 0 No -27 0.35 No 49 94.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68851296 + NM_133509 RAD51B 0 . . . 4.1 70.5 29 4.18 No 14 1.57 Yes 0 0 No -22 0.54 No 44 92.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108185869 + NM_000051 ATM 0 . . . 0.74 64.48 30 6.11 Yes 17 0.05 No 0 0 No -19 0.51 No 48 59.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68828781 + NM_004360 CDH1 0 . . . 4.02 80.12 18 5.37 No 63 -0.67 No 0 0 No -23 0.65 No 43 75.45 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48029830 + NM_000179 MSH6 0 . . . 0.58 73.16 49 6.83 Yes 17 0.39 No 0 0 No -23 0.61 No 41 45.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32973471 + NM_000059 BRCA2 0 . . . 2.64 75.11 54 8.36 Yes 39 0.48 No 0 0 No -20 0.4 No 49 85.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68951640 + NM_133509 RAD51B 0 . . . 9.23 81.72 23 6.63 Yes 8 1.93 Yes 0 0 No -22 0.64 No 50 95.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131952729 + NM_005732 RAD50 0 . . . 1.59 85.73 10 3.36 No 12 0.22 No 0 0 No -30 0.71 Yes 46 81.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108197715 + NM_000051 ATM 0 . . . 0.16 68.84 48 6.18 Yes 34 1 Yes 0 0 No -37 0.51 No 48 76.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32905370 + NM_000059 BRCA2 0 . . . 3.78 79.45 17 5.83 Yes 64 0.59 No 0 0 No -16 0.42 No 47 59.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108131105 + NM_000051 ATM 0 . . . 1.4 0 13 2.93 No 36 0.87 Yes 0 0 No -25 0.7 Yes 50 69.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68426929 + NM_133509 RAD51B 0 . . . 5.21 84.79 30 6.28 Yes 8 0.59 No 0 0 No -23 0.85 Yes 41 72.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108154595 + NM_000051 ATM 0 . . . 6.25 82.6 29 6.71 Yes 57 0.25 No 0 0 No -28 0.86 Yes 47 51.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215607610 - NM_000465 BARD1 0 . . . 0.88 0 10 4 No 67 0.11 No 0 0 No -23 0.55 No 45 34.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32890394 + NM_000059 BRCA2 0 . . . 0.52 68.71 27 6.27 Yes 69 0.31 No 0 0 No -27 0.81 Yes 42 50.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47745829 + NM_000251 MSH2 0 . . . 5.73 75.22 36 6.32 Yes 29 -3.73 No 0 0 No -33 0.64 No 44 98.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215674071 - NM_000465 BARD1 0 . . . 0.88 68.35 32 5.74 Yes 50 -3.79 No 0 0 No -28 0.43 No 50 61.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108144886 + NM_000051 ATM 0 . . . 2.49 79.05 33 7.4 Yes 22 0.18 No 0 0 No -32 0.56 No 48 54.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152366122 - NM_005431 XRCC2 0 . . . 3.52 68.73 49 7.14 Yes 46 1.09 Yes 0 0 No -23 0.37 No 40 93.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68789650 + NM_133509 RAD51B 0 . . . 2.81 65.81 21 5.04 No 33 0.17 No 0 0 No -20 0.69 Yes 44 32.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108186448 + NM_000051 ATM 0 . . . 3.5 60.11 20 7.14 Yes 17 0.22 No 0 0 No -19 0.57 No 43 67.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89631438 + NM_000314 PTEN 0 . . . 8.63 92.78 24 5.1 No 9 1.35 Yes 0 0 No -43 0.53 No 49 93.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47758583 + NM_000251 MSH2 0 . . . 4.1 83.18 26 4.36 No 8 1.15 Yes 0 0 No -30 0.64 No 47 47.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152349058 - NM_005431 XRCC2 0 . . . 2.87 85.17 24 5.48 No 25 0.32 No 0 0 No -23 0.85 Yes 19 34.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32902065 + NM_000059 BRCA2 0 . . . 0.56 71.92 20 6.17 Yes 44 1.01 Yes 0 0 No -31 0.33 No 53 42.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89709109 + NM_000314 PTEN 0 . . . 3.12 78.23 16 4.69 No 39 0.2 No 0 0 No -23 0.58 No 34 35.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68764404 + NM_133509 RAD51B 0 . . . 0.66 60.25 39 4.91 No 29 -3.3 No 0 0 No -58 0.28 No 46 50.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59862619 - NM_032043 BRIP1 0 . . . 6.01 80 31 5.97 Yes 69 0.88 Yes 0 0 No -30 0.77 Yes 50 64.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215619142 - NM_000465 BARD1 0 . . . 1.17 87.36 27 5.2 No 66 -3.39 No 0 0 No -59 0.77 Yes 52 79.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47726108 + NM_000251 MSH2 0 . . . 3.6 85.02 20 5.78 Yes 4 1.2 Yes 0 0 No -27 0.51 No 45 62.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68444987 + NM_133509 RAD51B 0 . . . 0.19 62.92 24 7.42 Yes 10 -2.79 No 0 0 No -23 0.93 Yes 48 80.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215653120 - NM_000465 BARD1 0 . . . 4.88 90.18 26 6.56 Yes 40 0.98 Yes 0 0 No -25 0.81 Yes 49 78.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68843368 + NM_004360 CDH1 0 . . . 2.43 70.85 31 6.48 Yes 23 1.59 Yes 0 0 No -30 0.8 Yes 40 61.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69131611 + NM_133509 RAD51B 0 . . . 6.47 78.22 13 4.36 No 35 -2.07 No 0 0 No -27 0.46 No 43 62.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32947179 + NM_000059 BRCA2 0 . . . 2.85 0 20 5.1 No 38 0.9 Yes 0 0 No -27 0.6 No 16 68.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90980250 - NM_002485 NBN 0 . . . 1.04 81.44 17 5.7 Yes 76 1.43 Yes 0 0 No -23 0.88 Yes 50 71.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37051011 + NM_000249 MLH1 0 . . . 4.33 76.54 29 5.39 No 74 -6.06 No 0 0 No -26 0.37 No 55 50.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56811860 + NM_058216 RAD51C 0 . . . 1.94 74.26 16 5.2 No -2 0.2 No 0 0 No -33 0.51 No 48 47.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105197099 + NM_021930 RINT1 0 . . . 8.05 91.49 16 4.69 No 74 0.85 Yes 0 0 No -18 0.6 No 52 62.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68781718 + NM_133509 RAD51B 0 . . . 1.16 65.2 53 7.53 Yes 64 0.67 No 0 0 No -33 0.56 No 21 52.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1227944 + NM_000455 STK11 0 . . . 5.56 73.74 12 4.24 No 64 -1.71 No 0 0 No -47 0.64 No 44 41.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89681673 + NM_000314 PTEN 0 . . . 0.86 66.14 14 5.66 Yes 13 0.05 No 0 0 No -25 0.79 Yes 49 87.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68349438 + NM_133509 RAD51B 0 . . . 6.8 82.14 18 5.8 Yes 3 0.85 Yes 0 0 No -24 0.63 No 43 72.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32919061 + NM_000059 BRCA2 0 . . . 0.23 69.11 16 4.42 No 46 -5.06 No 0 0 No -22 0.86 Yes 45 56.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47647602 + NM_000251 MSH2 0 . . . 3.79 77.63 24 6.16 Yes 19 1.41 Yes 0 0 No -23 0.28 No 39 80.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47666964 + NM_000251 MSH2 0 . . . 3.89 70.55 31 5.74 Yes 8 0.47 No 0 0 No -30 0.76 Yes 49 86.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108142637 + NM_000051 ATM 0 . . . 3.11 81.24 14 5.38 No 2 1.49 Yes 0 0 No -30 0.3 No 13 52.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59805924 - NM_032043 BRIP1 0 . . . 8.62 85.26 30 5.49 No 68 1.21 Yes 0 0 No -29 0.77 Yes 49 77.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37070159 + NM_000249 MLH1 0 . . . 2.28 77.38 17 5.57 Yes 28 1.52 Yes 0 0 No -16 0.54 No 49 50.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68935671 + NM_133509 RAD51B 0 . . . 0.21 0 20 6.71 Yes 52 0.89 Yes 0 0 No -19 0.8 Yes 53 50.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68864555 + NM_004360 CDH1 0 . . . 6.43 72.91 11 5.2 No 69 -3.35 No 0 0 No -24 0.39 No 37 75.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68486730 + NM_133509 RAD51B 0 . . . 0.36 0 14 5 No 34 0.22 No 0 0 No -18 0.5 No 38 54.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68598979 + NM_133509 RAD51B 0 . . . 1.96 79.36 12 4.12 No 74 0.84 Yes 0 0 No -29 0.54 No 52 50.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68475292 + NM_133509 RAD51B 0 . . . 8.58 78.81 14 5.5 No 63 0.81 Yes 0 0 No -24 0.3 No 41 57.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23643528 - NM_024675 PALB2 0 . . . 4.55 79.92 26 7.11 Yes 14 1.56 Yes 0 0 No -31 0.69 Yes 44 65.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152364103 - NM_005431 XRCC2 0 . . . 0.28 0 22 4.76 No 30 -2.11 No 0 0 No -22 0.68 Yes 47 56.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68848944 + NM_133509 RAD51B 0 . . . 1.02 67.71 26 5.19 No 36 -1.38 No 0 0 No -48 0.59 No 42 73.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47707538 + NM_000251 MSH2 0 . . . 7.04 85.29 15 5.51 No 45 1.31 Yes 0 0 No -27 0.49 No 45 69.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90949605 - NM_002485 NBN 0 . . . 1.93 63.53 12 5.57 Yes 15 1.11 Yes 27 0.52 Yes -28 0.64 No 43 68.68 No BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: No chr16 68801603 + NM_004360 CDH1 0 . . . 2.51 70.3 17 5.94 Yes 9 0.65 No 0 0 No -30 0.89 Yes 14 73.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68969724 + NM_133509 RAD51B 0 . . . 3.9 75.51 21 4.36 No 74 -4.25 No 0 0 No -24 0.33 No 51 64.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68897952 + NM_133509 RAD51B 0 . . . 8.85 88.97 14 5 No 19 1.13 Yes 0 0 No -37 0.22 No 39 84.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29132383 - NM_001005735 CHEK2 0 . . . 0.22 69.67 17 3.91 No 66 0.39 No 0 0 No -25 0.91 Yes 61 27.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131937805 + NM_005732 RAD50 0 . . . 5.45 75.2 73 9.24 Yes 69 -4.92 No 0 0 No -29 0.48 No 38 59.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90973666 - NM_002485 NBN 0 . . . 5.04 92.12 17 5.57 Yes 66 1.07 Yes 0 0 No -16 0.56 No 49 88.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190668674 + NM_000534 PMS1 0 . . . 7.22 84.29 15 4.58 No 9 0.96 Yes 0 0 No -14 0.41 No 49 78.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90967962 - NM_002485 NBN 0 . . . 7.23 89.78 19 3.76 No 7 0.02 No 0 0 No -22 0.66 No 51 38.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47679737 + NM_000251 MSH2 0 . . . 0.32 67.01 16 4.5 No -1 0.07 No 0 0 No -40 0.66 Yes 59 48.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59815126 - NM_032043 BRIP1 0 . . . 0.17 64.82 18 4.24 No 58 0.51 No 0 0 No -31 0.57 No 49 53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59906788 - NM_032043 BRIP1 0 . . . 7.95 80.38 34 6 Yes 22 0.38 No 0 0 No -33 0.71 Yes 35 74.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23628271 - NM_024675 PALB2 0 . . . 2.02 65.65 18 3.3 No 56 1.21 Yes 0 0 No -17 0.64 No 43 18.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68781946 + NM_133509 RAD51B 0 . . . 5.92 82.77 12 4.24 No 12 0.26 No 0 0 No -33 0.51 No 46 51.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59935866 - NM_032043 BRIP1 0 . . . 2.01 74.68 28 6.16 Yes 22 -2.56 No 0 0 No -21 0.43 No 45 75.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29081942 - NM_001005735 CHEK2 0 . . . 0.11 74.73 39 6.43 Yes 33 1.02 Yes 0 0 No -29 0.84 Yes 20 59.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69121015 + NM_133509 RAD51B 0 . . . 2.29 75.01 24 4.8 No 10 0.49 No 0 0 No -23 0.66 No 48 74.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68730936 + NM_133509 RAD51B 0 . . . 0.09 70.14 22 6.45 Yes 32 -2.37 No 0 0 No -21 0.9 Yes 50 66.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75499703 - NM_001040108 MLH3 0 . . . 4.7 81.28 15 5.9 Yes 66 -2.48 No 0 0 No -28 0.61 No 43 49.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59763862 - NM_032043 BRIP1 0 . . . 0.27 49.45 25 5.57 Yes 49 -2.81 No 0 0 No -24 0.8 Yes 39 42.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68906796 + NM_133509 RAD51B 0 . . . 2.24 0 29 5.86 Yes 6 0.97 Yes 0 0 No -28 0.78 Yes 52 85.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89658156 + NM_000314 PTEN 0 . . . 1.28 55.22 24 5.83 Yes 54 -0.48 No 0 0 No -23 0.59 No 32 80.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89730522 + NM_000314 PTEN 0 . . . 0.55 54.8 21 4.78 No 74 0.39 No 0 0 No -20 0.81 Yes 43 60.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68752507 + NM_133509 RAD51B 0 . . . 4.76 80.43 19 4.8 No 42 0.59 No 0 0 No -18 0.82 Yes 42 59.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59772876 - NM_032043 BRIP1 0 . . . 5.36 87.74 19 4.9 No 0 0.51 No 0 0 No -23 0.91 Yes 42 91.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45793089 - NM_001048171 MUTYH 0 . . . 4.4 77.06 52 7.28 Yes 71 -4.91 No 0 0 No -35 0.87 Yes 54 62.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68424134 + NM_133509 RAD51B 0 . . . 3.44 70.28 28 4.81 No 66 0.61 No 0 0 No -27 0.56 No 34 63.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68581842 + NM_133509 RAD51B 0 . . . 3.28 70.7 31 5.74 Yes 74 -3.11 No 0 0 No -28 0.48 No 48 57.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105182753 + NM_021930 RINT1 0 . . . 0.62 76.63 32 4.65 No 58 -4.58 No 0 0 No -22 0.74 Yes 47 48.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68860816 + NM_004360 CDH1 0 . . . 7.7 85.79 19 5 No 68 0.2 No 0 0 No -18 0.44 No 40 71.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6039147 - NM_000535 PMS2 0 . . . 3.59 75.1 17 7 Yes 42 0.87 Yes 0 0 No -16 0.79 Yes 54 56.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48012943 + NM_000179 MSH6 0 . . . 3.03 76.7 27 5.39 No 54 0.9 Yes 0 0 No -26 0.74 Yes 49 38.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37087697 + NM_000249 MLH1 0 . . . 9.33 95.02 22 5.89 Yes 20 1.45 Yes 0 0 No -21 0.82 Yes 38 91.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68587024 + NM_133509 RAD51B 0 . . . 4.96 91.21 31 5.73 Yes 12 1.32 Yes 0 0 No -30 0.59 No 46 93.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59844058 - NM_032043 BRIP1 0 . . . 3.38 71.41 32 6.45 Yes 21 0.61 No 0 0 No -31 0.61 No 49 62.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69070586 + NM_133509 RAD51B 0 . . . 2.87 78.69 20 7.14 Yes 54 -1.01 No 0 0 No -19 0.61 No 52 57.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105189840 + NM_021930 RINT1 0 . . . 5.41 90.92 18 5.26 No 3 0.8 Yes 0 0 No -26 0.77 Yes 44 58.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68706421 + NM_133509 RAD51B 0 . . . 5.68 74.93 14 4.51 No 64 1.84 Yes 0 0 No -13 0.34 No 46 70.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68870554 + NM_133509 RAD51B 0 . . . 10.12 82.13 55 6.87 Yes 6 0.86 Yes 0 0 No -15 0.31 No 45 82.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215612991 - NM_000465 BARD1 0 . . . 3.8 77.8 11 4.12 No 72 0.51 No 0 0 No -21 0.85 Yes 48 33.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215675173 - NM_000465 BARD1 0 . . . 3.17 81.16 39 7.22 Yes 47 -2.96 No 0 0 No -13 0.45 No 52 19.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32962326 + NM_000059 BRCA2 0 . . . 0.19 74.02 33 4.82 No 28 1.46 Yes 0 0 No -32 0.47 No 54 57.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1223840 + NM_000455 STK11 0 . . . 6.88 83.95 28 5.32 No 68 -1.74 No 0 0 No -24 0.47 No 40 59.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131969521 + NM_005732 RAD50 0 . . . 1.61 80.65 19 4.6 No 76 0.9 Yes 0 0 No -21 0.65 No 50 84.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94157384 - NM_005591 MRE11 0 . . . 1.42 72.1 27 5.57 Yes 20 -2.58 No 0 0 No -26 0.36 No 38 61.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47764310 + NM_000251 MSH2 0 . . . 8.63 83.06 44 6.2 Yes 32 0.79 Yes 0 0 No -20 0.24 No 48 75.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68329961 + NM_133509 RAD51B 0 . . . 2.22 86.31 28 5.39 No 3 0.71 No 0 0 No -27 0.85 Yes 50 92.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108177364 + NM_000051 ATM 0 . . . 2.54 79.3 33 7.27 Yes 37 1.43 Yes 0 0 No -25 0.55 No 44 64.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32912475 + NM_000059 BRCA2 0 . . . 0.01 76.63 25 6.3 Yes 71 0.29 No 0 0 No -24 0.72 Yes 51 65.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108223946 + NM_000051 ATM 0 . . . 0.29 68.25 18 4.9 No 53 0.89 Yes 0 0 No -17 0.21 No 19 76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131948592 + NM_005732 RAD50 0 . . . 0.82 64.98 17 4.58 No 10 -2.39 No 0 0 No -17 0.41 No 44 55.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190741184 + NM_000534 PMS1 0 . . . 5 73.72 17 4.12 No 0 1.67 Yes 0 0 No -32 0.23 No 39 42.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105184787 + NM_021930 RINT1 0 . . . 1.45 71.49 26 4.81 No 36 1.08 Yes 0 0 No -20 0.47 No 44 56.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68595751 + NM_133509 RAD51B 0 . . . 2.54 76.76 13 5.09 No 65 0.66 No 0 0 No -23 0.71 Yes 16 83.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37066221 + NM_000249 MLH1 0 . . . 10.39 83.67 19 5 No 55 2.02 Yes 0 0 No -21 0.68 Yes 32 85.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131954830 + NM_005732 RAD50 0 . . . 8.98 89.8 27 5.2 No 0 0.63 No 0 0 No -54 0.56 No 49 64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69133225 + NM_133509 RAD51B 0 . . . 0.2 67.76 28 5.22 No 28 -2.18 No 0 0 No -27 0.86 Yes 53 31.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90953411 - NM_002485 NBN 0 . . . 6.88 86.22 29 4.48 No 60 1.06 Yes 0 0 No -28 0.47 No 48 68.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68411595 + NM_133509 RAD51B 0 . . . 0.8 0 33 5.37 No 36 1.57 Yes 0 0 No -20 0.66 Yes 48 61.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47730389 + NM_000251 MSH2 0 . . . 5.74 73.75 34 4.48 No 63 -4.6 No 0 0 No -31 0.63 No 43 37.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41260817 - NM_007294 BRCA1 0 . . . 3.35 80.85 16 5.25 No 33 1.17 Yes 0 0 No -21 0.49 No 25 35.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23648949 - NM_024675 PALB2 0 . . . 4.24 85.15 32 6.39 Yes 54 1.53 Yes 0 0 No -26 0.38 No 49 90.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6046577 - NM_000535 PMS2 0 . . . 1.06 76.11 17 4.8 No 57 0.85 Yes 0 0 No -21 0.16 No 48 69.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108152973 + NM_000051 ATM 0 . . . 4.71 84.22 26 5.18 No 33 1.05 Yes 0 0 No -26 0.46 No 50 91.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68474339 + NM_133509 RAD51B 0 . . . 2.25 69.79 19 5.48 No 54 0.44 No 0 0 No -21 0.45 No 34 56.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89712222 + NM_000314 PTEN 0 . . . 1.03 68.58 17 6.16 Yes 49 0.01 No 0 0 No -25 0.62 No 53 43.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215657430 - NM_000465 BARD1 0 . . . 0.61 64.21 15 5.29 No -1 0.77 Yes 0 0 No -14 0.34 No 25 64.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68840048 + NM_133509 RAD51B 0 . . . 2.1 73.87 20 7.05 Yes 55 1.33 Yes 0 0 No -19 0.74 Yes 46 46.53 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59855526 - NM_032043 BRIP1 0 . . . 1.29 71.29 12 5.74 Yes 52 1.15 Yes 0 0 No -55 0.44 No 35 68.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47669597 + NM_000251 MSH2 0 . . . 3.8 75.74 17 5.57 Yes NA NA NA 0 0 No -16 0.72 Yes 44 48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7587573 - NM_000546 TP53 0 . . . 0.43 73.22 21 5.66 Yes 20 0.45 No 0 0 No -20 0.82 Yes 38 65.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40985808 + NM_001164269 RAD51 0 . . . 4.18 77.63 21 5.2 No 39 0.81 Yes 0 0 No -20 0.67 Yes 19 91.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94219364 - NM_005591 MRE11 0 . . . 3.04 69.02 24 5.1 No -2 0.16 No 0 0 No -21 0.58 No 45 49.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75501366 - NM_001040108 MLH3 0 . . . 7.79 88.81 19 4.9 No 4 0.67 No 0 0 No -23 0.33 No 51 55.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68333936 + NM_133509 RAD51B 0 . . . 0.74 0 17 5.82 Yes 19 1.19 Yes 0 0 No -27 0.91 Yes 39 84.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105190434 + NM_021930 RINT1 0 . . . 1.39 58.55 13 4.36 No 23 0.89 Yes 0 0 No -25 0.5 No 35 37.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68525156 + NM_133509 RAD51B 0 . . . 6.6 73.75 9 7.68 Yes 6 1.15 Yes 0 0 No -52 0.56 No 35 60.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152347151 - NM_005431 XRCC2 0 . . . 1.67 0 18 5.29 No 44 0.17 No 0 0 No -29 0.73 Yes 52 42.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89691995 + NM_000314 PTEN 0 . . . 0.03 68.13 38 6.91 Yes 72 -5.23 No 0 0 No -37 0.6 No 45 63.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215671064 - NM_000465 BARD1 0 . . . 1.82 67.04 36 5.75 Yes 58 0.16 No 0 0 No -25 0.66 No 37 61.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68491374 + NM_133509 RAD51B 0 . . . 2.55 75.39 33 5.84 Yes 41 0.41 No 0 0 No -30 0.32 No 46 93.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68596773 + NM_133509 RAD51B 0 . . . 0.46 75.43 17 4.8 No 70 0.96 Yes 0 0 No -59 0.76 Yes 49 40.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69042842 + NM_133509 RAD51B 0 . . . 0.01 0 36 6.24 Yes 71 -4.2 No 0 0 No -33 0.47 No 47 36.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68890487 + NM_133509 RAD51B 0 . . . 1.24 74.91 36 5.84 Yes 28 0.58 No 0 0 No -27 0.48 No 43 94.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108207985 + NM_000051 ATM 0 . . . 4.25 81.46 26 4.74 No 73 -2.9 No 0 0 No -25 0.52 No 42 67.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68448887 + NM_133509 RAD51B 0 . . . 6.24 82.31 18 8 Yes 3 0.46 No 0 0 No -28 0.57 No 55 56.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68379171 + NM_133509 RAD51B 0 . . . 1.28 76.51 22 4.15 No 42 1.53 Yes 0 0 No -24 0.9 Yes 50 71.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68721694 + NM_133509 RAD51B 0 . . . 5.92 81.14 18 4.9 No 1 0.86 Yes 0 0 No -49 0.49 No 45 80.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190662543 + NM_000534 PMS1 0 . . . 7.64 84.89 27 5.69 Yes 26 0.51 No 0 0 No -26 0.92 Yes 39 61.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47637763 + NM_000251 MSH2 0 . . . 5.72 74.87 34 5.34 No 32 0.77 Yes 0 0 No -24 0.36 No 26 82.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47741227 + NM_000251 MSH2 0 . . . 5.44 80.11 31 6.08 Yes 16 0.96 Yes 0 0 No -30 0.68 Yes 42 73.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68752651 + NM_133509 RAD51B 0 . . . 4.24 78.94 27 6.3 Yes 7 1.07 Yes 0 0 No -26 0.57 No 36 56.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41227859 - NM_007294 BRCA1 0 . . . 0.87 0 25 7.16 Yes 22 0.46 No 0 0 No -24 0.87 Yes 36 82.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68786771 + NM_133509 RAD51B 0 . . . 2.71 71.25 19 4.08 No 6 0.4 No 0 0 No -22 0.89 Yes 52 41.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47774531 + NM_000251 MSH2 0 . . . 2.29 76.75 53 7.38 Yes 68 0.96 Yes 0 0 No -30 0.59 No 58 33.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68795858 + NM_004360 CDH1 0 . . . 1.85 0 20 7.14 Yes 36 0.39 No 0 0 No -19 0.74 Yes 40 85.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68720684 + NM_133509 RAD51B 0 . . . 2.82 0 34 6.54 Yes 65 0.47 No 0 0 No -20 0.56 No 44 58.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89723926 + NM_000314 PTEN 0 . . . 13.49 85.21 25 4.33 No 13 1.56 Yes 0 0 No -22 0.53 No 45 56.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108200271 + NM_000051 ATM 0 . . . 0.75 0 27 5.69 Yes 44 0.93 Yes 0 0 No -27 0.32 No 39 49.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68796794 + NM_133509 RAD51B 0 . . . 0.99 64.58 31 5.57 Yes 0 0.47 No 0 0 No -30 0.83 Yes 45 37.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89721003 + NM_000314 PTEN 0 . . . 2.97 78.57 35 4.4 No 67 0.76 No 0 0 No -26 0.87 Yes 36 58.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69068349 + NM_133509 RAD51B 0 . . . 0.29 0 18 5.17 No 21 0.97 Yes 0 0 No -17 0.55 No 34 56.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105186836 + NM_021930 RINT1 0 . . . 0.49 73.27 36 5.17 No 55 -3.85 No 0 0 No -23 0.41 No 54 76.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68399757 + NM_133509 RAD51B 0 . . . 1 0 25 7.48 Yes 5 0.69 No 0 0 No -24 0.89 Yes 43 59.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68605770 + NM_133509 RAD51B 0 . . . 4.66 80.67 20 5.17 No 8 0.09 No 0 0 No -19 0.56 No 47 52.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41244116 - NM_007294 BRCA1 0 . . . 1.32 81.17 18 4.58 No 59 0.73 No 0 0 No -56 0.66 Yes 51 54.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131911308 + NM_005732 RAD50 0 . . . 3.05 67.8 16 5.89 Yes 74 -1.57 No 0 0 No -21 0.52 No 44 66.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68791185 + NM_133509 RAD51B 0 . . . 2.41 70.11 27 3.68 No 3 0.77 Yes 0 0 No -26 0.5 No 40 76.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215613275 - NM_000465 BARD1 0 . . . 2.43 82.1 17 4.8 No 64 1.5 Yes 0 0 No -39 0.59 No 32 80.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68811541 + NM_004360 CDH1 0 . . . 4.21 85.66 32 5.67 Yes 55 1.28 Yes 0 0 No -31 0.81 Yes 49 91.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68430888 + NM_133509 RAD51B 0 . . . 2.5 73.42 17 4.58 No 37 0.15 No 0 0 No -18 0.52 No 38 86.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59909947 - NM_032043 BRIP1 0 . . . 5.24 78.92 12 5.02 No 73 0.27 No 0 0 No -21 0.53 No 34 43.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75488426 - NM_001040108 MLH3 0 . . . 5.76 82.75 54 5.52 No 32 1.27 Yes 0 0 No -26 0.38 No 47 68.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190682689 + NM_000534 PMS1 0 . . . 1.76 63.54 22 5.08 No 68 -4.86 No 0 0 No -21 0.46 No 44 55.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68753803 + NM_133509 RAD51B 0 . . . 4.14 84.86 30 4.75 No 27 1.16 Yes 0 0 No -29 0.47 No 46 62.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59838704 - NM_032043 BRIP1 0 . . . 9.39 91.96 33 5.89 Yes 61 0.84 Yes 0 0 No -29 0.59 No 43 63.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69039299 + NM_133509 RAD51B 0 . . . 4.23 83.08 19 7.07 Yes 48 -0.31 No 0 0 No -18 0.4 No 25 69.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89644992 + NM_000314 PTEN 0 . . . 2.74 80.03 17 6.86 Yes 53 0.24 No 0 0 No -32 0.44 No 25 63.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68668953 + NM_133509 RAD51B 0 . . . 2.63 62.31 32 4.82 No 25 1 Yes 0 0 No -31 0.74 Yes 26 58.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33445269 - NM_002878 RAD51D 0 . . . 2.82 0 30 5.66 Yes 28 0.32 No 0 0 No -25 0.66 No 33 56.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89721983 + NM_000314 PTEN 0 . . . 0.89 74.23 26 5.3 No 9 1 Yes 0 0 No -25 0.91 Yes 45 60.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152353442 - NM_005431 XRCC2 0 . . . 3.46 80.12 15 4.62 No 5 1.04 Yes 0 0 No -23 0.85 Yes 53 44.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108135698 + NM_000051 ATM 0 . . . 0.58 67.2 23 5.29 No 70 -4.52 No 0 0 No -22 0.92 Yes 27 41.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94184750 - NM_005591 MRE11 0 . . . 2.56 70.55 18 4.44 No 35 0.9 Yes 0 0 No -24 0.84 Yes 45 84.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1214696 + NM_000455 STK11 0 . . . 8.67 85.68 27 6.16 Yes 3 1.56 Yes 0 0 No -26 0.59 No 42 82.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7565621 - NM_000546 TP53 0 . . . 1.06 74.5 22 4.65 No 53 -2.98 No 0 0 No -21 0.49 No 35 52.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68889697 + NM_133509 RAD51B 0 . . . 5.11 77.74 27 5.74 Yes 3 0.7 No 0 0 No -26 0.93 Yes 51 92.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108162902 + NM_000051 ATM 0 . . . 1.93 66.35 14 4.86 No -2 0.46 No 0 0 No -22 0.81 Yes 45 59.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37062188 + NM_000249 MLH1 0 . . . 3.06 64.64 38 6.44 Yes 26 1.43 Yes 0 0 No -26 0.68 Yes 37 79.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69078825 + NM_133509 RAD51B 0 . . . 0.22 64.59 18 4.79 No 27 -4.14 No 0 0 No -43 0.65 No 32 44.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68525883 + NM_133509 RAD51B 0 . . . 4.62 71.28 29 5.74 Yes 2 0.79 Yes 0 0 No -26 0.52 No 33 65.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215611842 - NM_000465 BARD1 0 . . . 2.86 74.81 27 5.2 No 67 1.67 Yes 0 0 No -29 0.42 No 35 97.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94184390 - NM_005591 MRE11 0 . . . 0.24 73.69 33 7.68 Yes 67 1.05 Yes 0 0 No -32 0.84 Yes 47 78.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68702623 + NM_133509 RAD51B 0 . . . 6.91 86.29 24 6.24 Yes 62 -3.7 No 0 0 No -23 0.92 Yes 52 26.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68846186 + NM_004360 CDH1 0 . . . 4.2 73.2 19 6.48 Yes 46 1.39 Yes 0 0 No -27 0.55 No 47 49.13 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68972204 + NM_133509 RAD51B 0 . . . 0.8 0 38 8.41 Yes 46 0.23 No 0 0 No -32 0.7 Yes 42 55.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69060500 + NM_133509 RAD51B 0 . . . 2.76 82.14 28 5.39 No 65 -0.84 No 0 0 No -26 0.53 No 39 52.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68896645 + NM_133509 RAD51B 0 . . . 3.72 76.62 22 6.39 Yes 24 0.47 No 0 0 No -21 0.93 Yes 46 52.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75512799 - NM_001040108 MLH3 0 . . . 4.45 69.34 26 6.84 Yes 16 1.03 Yes 0 0 No -25 0.85 Yes 42 92.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47789854 + NM_000251 MSH2 0 . . . 7.82 85.96 21 5.04 No 0 0.27 No 0 0 No -20 0.43 No 45 92.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59763117 - NM_032043 BRIP1 0 . . . 4.77 76.59 24 6.69 Yes 6 0.4 No 0 0 No -29 0.7 Yes 43 81.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68975400 + NM_133509 RAD51B 0 . . . 0.75 77.29 11 5.57 Yes 75 1.61 Yes 0 0 No -57 0.63 No 30 30.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69042527 + NM_133509 RAD51B 0 . . . 7.43 78.53 21 4.28 No 2 1.18 Yes 0 0 No -20 0.71 Yes 50 88.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47708967 + NM_000251 MSH2 0 . . . 6.66 81.26 27 5.18 No 42 -0.44 No 0 0 No -26 0.59 No 39 49.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68720028 + NM_133509 RAD51B 0 . . . 2.2 68.87 25 4.81 No 62 0.02 No 0 0 No -24 0.82 Yes 38 60.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89629077 + NM_000314 PTEN 0 . . . 4.77 88.68 19 3.85 No 9 1.12 Yes 0 0 No -18 0.65 No 49 95.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47647227 + NM_000251 MSH2 0 . . . 1.72 83.18 30 5.91 Yes 33 1.16 Yes 0 0 No -28 0.75 Yes 40 39.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69017426 + NM_133509 RAD51B 0 . . . 0.99 76.43 26 4.36 No 30 1.09 Yes 0 0 No -25 0.74 Yes 44 67.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68812394 + NM_133509 RAD51B 0 . . . 2.12 84.41 21 5.74 Yes 25 0.96 Yes 0 0 No -20 0.72 Yes 39 72.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68314258 + NM_133509 RAD51B 0 . . . 7.5 92.64 63 7.75 Yes 17 1.2 Yes 0 0 No -31 0.45 No 41 64.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215615653 - NM_000465 BARD1 0 . . . 3.74 81.68 20 5 No 55 0.96 Yes 0 0 No -19 0.77 Yes 47 69.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47786040 + NM_000251 MSH2 0 . . . 1.26 61.2 27 5.74 Yes 21 -2.68 No 0 0 No -26 0.85 Yes 44 75.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68707466 + NM_133509 RAD51B 0 . . . 5.76 82.99 21 5.2 No 6 1.21 Yes 0 0 No -20 0.24 No 36 58.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59825726 - NM_032043 BRIP1 0 . . . 4.14 70.51 27 4.81 No 38 0.72 No 0 0 No -26 0.76 Yes 43 46.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89706597 + NM_000314 PTEN 0 . . . 4.58 78.02 20 5.08 No 12 0.18 No 0 0 No -25 0.66 No 46 74.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69101913 + NM_133509 RAD51B 0 . . . 5.09 63.33 15 6.32 Yes 38 0.87 Yes 0 0 No -22 0.88 Yes 34 20.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59767750 - NM_032043 BRIP1 0 . . . 3.85 75.7 24 5.02 No 56 0.57 No 0 0 No -51 0.43 No 47 57.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68937558 + NM_133509 RAD51B 0 . . . 0.83 79.72 18 5.31 No 26 1.46 Yes 0 0 No -18 0.72 Yes 52 85.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190676913 + NM_000534 PMS1 0 . . . 0.19 74.23 22 4.67 No 36 -2.59 No 0 0 No -21 0.93 Yes 36 36.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59864095 - NM_032043 BRIP1 0 . . . 1.93 66.5 97 10.15 Yes -4 0.63 No 0 0 No -25 0.33 No 53 27.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68898118 + NM_133509 RAD51B 0 . . . 4.19 85.97 12 4.8 No 74 -1 No 0 0 No -23 0.7 Yes 40 67.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68658725 + NM_133509 RAD51B 0 . . . 3.56 71.51 24 4.8 No 23 0.6 No 0 0 No -23 0.89 Yes 41 88.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68364773 + NM_133509 RAD51B 0 . . . 0.01 69.56 21 5.34 No 14 -2.73 No 0 0 No -20 0.73 Yes 45 38.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68759779 + NM_133509 RAD51B 0 . . . 5.84 76.3 29 5.92 Yes 8 1.05 Yes 0 0 No -28 0.73 Yes 18 64.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108189475 + NM_000051 ATM 0 . . . 4.37 67.62 29 7.14 Yes 60 0.21 No 0 0 No -28 0.89 Yes 48 78.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41205489 - NM_007294 BRCA1 0 . . . 3.8 75.16 16 5.47 No 30 1.05 Yes 0 0 No -28 0.46 No 28 52.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68853792 + NM_004360 CDH1 0 . . . 3.2 71.9 9 4.9 No 66 1.34 Yes 0 0 No -41 0.38 No 40 94.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68655256 + NM_133509 RAD51B 0 . . . 3.3 76.23 30 6 Yes 47 -2.23 No 0 0 No -27 0.47 No 39 53.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41236313 - NM_007294 BRCA1 0 . . . 0.09 74.68 14 4.47 No 54 0.64 No 0 0 No -40 0.51 No 54 86.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59867542 - NM_032043 BRIP1 0 . . . 1.56 78.68 25 4.8 No 5 0.23 No 0 0 No -22 0.33 No 44 58.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7574114 - NM_000546 TP53 0 . . . 1.39 63.5 21 5.19 No 18 0.68 No 0 0 No -21 0.46 No 36 45.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68987504 + NM_133509 RAD51B 0 . . . 5.31 77.33 31 5.74 Yes 46 -2.84 No 0 0 No -30 0.62 No 51 81.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68570131 + NM_133509 RAD51B 0 . . . 3.59 79.06 24 5.48 No 35 0.08 No 0 0 No -23 0.89 Yes 42 87.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23648765 - NM_024675 PALB2 0 . . . 0.89 74.36 71 9.88 Yes 26 0.6 No 0 0 No -22 0.67 Yes 27 63.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21980542 - NM_000077 CDKN2A 0 . . . 4.92 79.4 14 5.29 No 10 0.77 No 0 0 No -21 0.41 No 48 93.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33432295 - NM_002878 RAD51D 0 . . . 1.73 76.45 16 4.63 No 6 0.34 No 0 0 No -21 0.75 Yes 38 60.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68377189 + NM_133509 RAD51B 0 . . . 2.69 76.16 26 5.2 No 2 0.8 Yes 0 0 No -26 0.68 Yes 45 43.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68539521 + NM_133509 RAD51B 0 . . . 6.38 88.71 9 3.87 No 29 0.98 Yes 0 0 No -37 0.37 No 40 50.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68836413 + NM_133509 RAD51B 0 . . . 2.1 0 54 7.69 Yes 42 0.65 No 0 0 No -41 0.63 No 36 73.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90966920 - NM_002485 NBN 0 . . . 9.99 91.93 39 6.71 Yes 67 0.6 No 0 0 No -23 0.62 No 48 68.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215674593 - NM_000465 BARD1 0 . . . 4.6 67.01 21 4.63 No 42 -0.16 No 0 0 No -20 0.65 No 16 45.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89724376 + NM_000314 PTEN 0 . . . 3.87 83.57 35 5.35 No 32 0.69 No 0 0 No -31 0.68 Yes 44 75.23 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68565138 + NM_133509 RAD51B 0 . . . 4.09 74.99 34 6.91 Yes 45 -4.26 No 0 0 No -25 0.46 No 49 81.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68397169 + NM_133509 RAD51B 0 . . . 6.55 85.74 12 4.56 No 48 0.95 Yes 0 0 No -20 0.36 No 37 80.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6050393 - NM_000535 PMS2 0 . . . 1.27 72.21 35 6 Yes 65 0.54 No 0 0 No -26 0.81 Yes 45 83.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47722291 + NM_000251 MSH2 0 . . . 0.66 76.49 23 5.13 No 47 -4.8 No 0 0 No -28 0.73 Yes 48 42.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59917635 - NM_032043 BRIP1 0 . . . 2.4 68.36 35 5.44 No 16 1.12 Yes 0 0 No -23 0.36 No 42 94.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41001888 + NM_001164269 RAD51 0 . . . 6.39 77.79 30 7.29 Yes 76 0.85 Yes 0 0 No -30 0.82 Yes 48 71.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131969368 + NM_005732 RAD50 0 . . . 4.47 74.82 21 4.46 No 58 0.92 Yes 0 0 No -20 0.58 No 43 94.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68792491 + NM_004360 CDH1 0 . . . 0.29 68.65 21 4.46 No 37 0.48 No 0 0 No -50 0.69 Yes 40 73.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68870959 + NM_004360 CDH1 0 . . . 6.38 75.5 29 4.92 No 50 2.18 Yes 0 0 No -28 0.91 Yes 42 91.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68547394 + NM_133509 RAD51B 0 . . . 0.17 73.11 18 4.8 No 62 0.8 Yes 0 0 No -23 0.41 No 48 48.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68504840 + NM_133509 RAD51B 0 . . . 0.63 62.58 24 4.67 No 6 1.13 Yes 0 0 No -57 0.43 No 40 51.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131962551 + NM_005732 RAD50 0 . . . 1.71 70.61 29 5.85 Yes 70 -6.12 No 0 0 No -28 0.92 Yes 53 45.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89628579 + NM_000314 PTEN 0 . . . 9.62 82.56 70 5.36 No 40 0.75 No 0 0 No -46 0.79 Yes 49 44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59757733 - NM_032043 BRIP1 0 . . . 6.07 0 26 4.89 No 29 0.35 No 0 0 No -25 0.5 No 39 91.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68379443 + NM_133509 RAD51B 0 . . . 2.48 84.41 19 4.79 No 8 1.19 Yes 0 0 No -19 0.65 No 50 69.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69124832 + NM_133509 RAD51B 0 . . . 3.05 75.84 21 5.66 Yes 42 0.28 No 0 0 No -20 0.62 No 52 36.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40997530 + NM_001164269 RAD51 0 . . . 2.23 60.98 13 4.36 No 73 1.08 Yes 0 0 No -32 0.57 No 33 53.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89664281 + NM_000314 PTEN 0 . . . 2.72 66.18 58 7.93 Yes 47 0.57 No 0 0 No -57 0.49 No 39 63.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68574657 + NM_133509 RAD51B 0 . . . 1.09 66.11 63 10.18 Yes 41 -3.24 No 0 0 No -23 0.31 No 46 64.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45793025 - NM_001048171 MUTYH 0 . . . 1.4 71.46 20 4.53 No 0 0.53 No 0 0 No -19 0.92 Yes 58 42.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84389682 - NM_139076 FAM175A 0 . . . 4.53 77.27 28 6.1 Yes 1 0.45 No 0 0 No -27 0.42 No 46 67.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68753140 + NM_133509 RAD51B 0 . . . 7.53 76.22 19 6.01 Yes -3 1.26 Yes 0 0 No -31 0.67 Yes 39 91.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68339916 + NM_133509 RAD51B 0 . . . 2.53 72.43 20 4.97 No 49 -3.03 No 0 0 No -23 0.66 No 39 18.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69084622 + NM_133509 RAD51B 0 . . . 3.7 73.2 23 4.8 No 13 0.35 No 0 0 No -22 0.81 Yes 45 63.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32891970 + NM_000059 BRCA2 0 . . . 3.61 63.86 25 3.88 No 63 0.71 No 0 0 No -27 0.67 Yes 44 56.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68359192 + NM_133509 RAD51B 0 . . . 0.84 66.26 18 5.98 Yes 64 -5.36 No 0 0 No -17 0.73 Yes 49 34.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68383043 + NM_133509 RAD51B 0 . . . 5.05 87.6 27 5.03 No 75 1.6 Yes 0 0 No -26 0.8 Yes 45 64.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90955227 - NM_002485 NBN 0 . . . 0.34 64.37 23 5.05 No 57 0.85 Yes 0 0 No -23 0.88 Yes 49 41.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68823450 + NM_133509 RAD51B 0 . . . 0.09 74.68 16 5.55 No 4 0.41 No 0 0 No -30 0.72 Yes 54 78.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56770309 + NM_058216 RAD51C 0 . . . 1.05 65.47 37 8.13 Yes 67 0.5 No 0 0 No -36 0.28 No 47 26.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89731089 + NM_000314 PTEN 0 . . . 0.75 0 22 5.22 No 57 0.99 Yes 0 0 No -22 0.46 No 48 42.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215654095 - NM_000465 BARD1 0 . . . 2.6 83.77 17 4.11 No 31 1.13 Yes 0 0 No -21 0.55 No 46 55.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56810421 + NM_058216 RAD51C 0 . . . 1.03 84.16 38 6.19 Yes 73 0.33 No 0 0 No -37 0.68 Yes 22 58.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215652738 - NM_000465 BARD1 0 . . . 7.72 81.93 23 7.06 Yes 53 0.89 Yes 0 0 No -22 0.48 No 40 76.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69095519 + NM_133509 RAD51B 0 . . . 6.34 82.18 29 5.74 Yes 45 -2.39 No 0 0 No -28 0.58 No 52 48.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215605973 - NM_000465 BARD1 0 . . . 6.88 70.41 16 4.69 No 18 1.27 Yes 0 0 No -38 0.42 No 36 52.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68386519 + NM_133509 RAD51B 0 . . . 10.12 88.21 21 4.53 No 67 1.05 Yes 0 0 No -55 0.82 Yes 42 79.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68585291 + NM_133509 RAD51B 0 . . . 5.46 76.13 21 5.79 Yes 43 0.01 No 0 0 No -21 0.81 Yes 47 63.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215629785 - NM_000465 BARD1 0 . . . 2.6 68.19 14 6.48 Yes 74 0.85 Yes 0 0 No -24 0.63 No 39 45.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40996986 + NM_001164269 RAD51 0 . . . 2.15 85.64 45 7.48 Yes 33 0.98 Yes 0 0 No -26 0.9 Yes 50 72.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59757737 - NM_032043 BRIP1 0 . . . 8.3 75.02 22 5.29 No 25 0.37 No 0 0 No -21 0.63 No 43 93.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190674040 + NM_000534 PMS1 0 . . . 0.82 74.32 27 6.11 Yes 74 -6.93 No 0 0 No -31 0.62 No 44 59.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108174176 + NM_000051 ATM 0 . . . 1.34 71.96 32 6.64 Yes 66 -2.01 No 0 0 No -31 0.84 Yes 23 62.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68974441 + NM_133509 RAD51B 0 . . . 0.77 65.89 34 4.31 No 23 0.79 Yes 0 0 No -22 0.64 No 35 72.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89625927 + NM_000314 PTEN 0 . . . 1.29 84.42 12 5.27 No 43 0.23 No 0 0 No -48 0.25 No 42 80.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68848837 + NM_133509 RAD51B 0 . . . 0.31 0 27 6.46 Yes 19 0.44 No 0 0 No -27 0.73 Yes 39 42.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33441997 - NM_002878 RAD51D 0 . . . 2.94 78.71 14 5.68 Yes -2 0.58 No 0 0 No -26 0.5 No 50 89.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59826494 - NM_032043 BRIP1 0 . . . 7.99 88.27 24 5.48 No 7 0.02 No 0 0 No -29 0.62 No 51 78.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131899671 + NM_005732 RAD50 0 . . . 2.98 58.69 33 5.81 Yes 58 1.24 Yes 0 0 No -32 0.59 No 38 65.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68473466 + NM_133509 RAD51B 0 . . . 0.34 71.34 19 5.66 Yes 13 0.7 No 0 0 No -18 0.44 No 45 68.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75489664 - NM_001040108 MLH3 0 . . . 4.16 73.59 37 6.42 Yes 19 0.69 No 0 0 No -27 0.79 Yes 39 76.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89627987 + NM_000314 PTEN 0 . . . 5.31 73.96 26 6.63 Yes -1 0.58 No 0 0 No -25 0.94 Yes 40 66.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108232136 + NM_000051 ATM 0 . . . 1.69 67.45 30 5.76 Yes 6 0.05 No 0 0 No -29 0.77 Yes 44 85.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68882277 + NM_133509 RAD51B 0 . . . 2.14 68.4 20 5.1 No 51 0.84 Yes 0 0 No -19 0.68 Yes 51 78.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90958774 - NM_002485 NBN 0 . . . 2.18 70.04 26 6.4 Yes 34 0.37 No 0 0 No -25 0.73 Yes 50 54.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6013305 - NM_000535 PMS2 0 . . . 0.72 72.05 18 7 Yes 63 -4.66 No 0 0 No -28 0.6 No 47 35.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105175184 + NM_021930 RINT1 0 . . . 1.52 72.06 19 4.75 No 39 0.83 Yes 0 0 No -32 0.65 No 41 76.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47662753 + NM_000251 MSH2 0 . . . 5.99 86.2 21 5 No 9 0.98 Yes 0 0 No -20 0.94 Yes 49 87.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68810071 + NM_004360 CDH1 0 . . . 2.7 85.02 23 6.71 Yes 8 1.35 Yes 0 0 No -22 0.69 Yes 50 92.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68484903 + NM_133509 RAD51B 0 . . . 4.54 79.66 26 5.98 Yes 18 0.46 No 0 0 No -30 0.59 No 47 81.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190737623 + NM_000534 PMS1 0 . . . 3.15 68.34 20 5.66 Yes 21 1.19 Yes 0 0 No -25 0.59 No 28 64.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33440582 - NM_002878 RAD51D 0 . . . 1.65 71.2 24 5.85 Yes 65 1.22 Yes 0 0 No -32 0.77 Yes 48 45.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68474557 + NM_133509 RAD51B 0 . . . 3.5 68.66 21 4.3 No 0 0.82 Yes 0 0 No -29 0.89 Yes 40 65.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59891976 - NM_032043 BRIP1 0 . . . 1.77 74.8 34 5.96 Yes 4 -1.83 No 0 0 No -34 0.53 No 36 61.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69091630 + NM_133509 RAD51B 0 . . . 0.68 64.28 26 5.48 No 54 0.01 No 0 0 No -25 0.53 No 53 32.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94193805 - NM_005591 MRE11 0 . . . 4.4 77.14 21 6.07 Yes 56 1.43 Yes 0 0 No -24 0.49 No 44 71.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33432225 - NM_002878 RAD51D 0 . . . 7.64 78.15 19 5.39 No 1 1.33 Yes 0 0 No -26 0.41 No 47 90.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68671432 + NM_133509 RAD51B 0 . . . 3.18 68.47 18 5.53 No 9 0.34 No 0 0 No -27 0.36 No 49 66.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69119820 + NM_133509 RAD51B 0 . . . 0.02 73.89 23 4.91 No 14 1.1 Yes 0 0 No -25 0.7 Yes 48 93.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68378560 + NM_133509 RAD51B 0 . . . 5.94 74.04 11 5 No 32 1.2 Yes 0 0 No -26 0.74 Yes 47 82.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215627343 - NM_000465 BARD1 0 . . . 3.95 0 24 4.77 No 23 -2.45 No 0 0 No -23 0.4 No 48 61.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59870238 - NM_032043 BRIP1 0 . . . 4.83 69.73 39 6.56 Yes 76 0.78 Yes 0 0 No -38 0.63 No 38 85.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47640393 + NM_000251 MSH2 0 . . . 4.44 84.17 34 6.77 Yes 43 0.29 No 0 0 No -33 0.51 No 48 78.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41001249 + NM_001164269 RAD51 0 . . . 3.44 77.85 20 4.8 No 41 0.93 Yes 0 0 No -19 0.9 Yes 17 88.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89722505 + NM_000314 PTEN 0 . . . 0.7 78.27 23 4.69 No 67 0.32 No 0 0 No -20 0.9 Yes 46 35.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108145137 + NM_000051 ATM 0 . . . 6.99 80.69 19 7.32 Yes 16 1.34 Yes 0 0 No -23 0.8 Yes 42 88.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47697682 + NM_000251 MSH2 0 . . . 2 80.34 26 5.44 No 33 1.17 Yes 0 0 No -25 0.52 No 42 34.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23647245 - NM_024675 PALB2 0 . . . 6.85 79.91 24 5.19 No 34 0.86 Yes 0 0 No -23 0.78 Yes 40 81.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89703683 + NM_000314 PTEN 0 . . . 2.5 75.41 20 4.8 No 7 1.4 Yes 0 0 No -20 0.72 Yes 51 58.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89629027 + NM_000314 PTEN 0 . . . 3.88 77.4 23 5.14 No 44 0.53 No 0 0 No -31 0.61 No 14 63.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68766143 + NM_133509 RAD51B 0 . . . 7.18 79.94 18 4.9 No 26 1 Yes 0 0 No -34 0.68 Yes 32 71.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68817624 + NM_004360 CDH1 0 . . . 4.42 84.17 61 8.32 Yes 42 1.58 Yes 0 0 No -35 0.54 No 16 94.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89622490 + NM_000314 PTEN 0 . . . 5.52 79.16 34 7.08 Yes 66 1.17 Yes 0 0 No -23 0.72 Yes 47 90.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7568603 - NM_000546 TP53 0 . . . 2.92 76.85 20 5.45 No 26 0.94 Yes 0 0 No -19 0.56 No 50 78.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75519487 - NM_001040108 MLH3 0 . . . 3.66 70.67 23 5.74 Yes 5 1.44 Yes 0 0 No -22 0.91 Yes 43 65.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59829536 - NM_032043 BRIP1 0 . . . 1.38 64.1 22 5.79 Yes 39 1.76 Yes 0 0 No -21 0.67 Yes 19 75.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131968465 + NM_005732 RAD50 0 . . . 2.6 56.84 18 4.89 No 17 0.52 No 0 0 No -17 0.54 No 41 77.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7588812 - NM_000546 TP53 0 . . . 1.21 76.32 31 7.42 Yes 58 -4.42 No 0 0 No -30 0.91 Yes 47 38.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59909108 - NM_032043 BRIP1 0 . . . 1.87 71.73 22 5.29 No 64 0.73 No 0 0 No -22 0.85 Yes 46 65.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68550867 + NM_133509 RAD51B 0 . . . 3.61 71.87 29 5.86 Yes 32 0.45 No 0 0 No -24 0.41 No 32 48.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32973445 + NM_000059 BRCA2 0 . . . 0.39 0 20 5.57 Yes 13 0.49 No 0 0 No -19 0.69 Yes 45 88.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90982241 - NM_002485 NBN 0 . . . 2.4 81.13 21 5.2 No 13 1.56 Yes 0 0 No -20 0.35 No 45 67.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59777503 - NM_032043 BRIP1 0 . . . 0.34 63.81 20 4.69 No 9 0.87 Yes 0 0 No -19 0.86 Yes 37 55.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68703784 + NM_133509 RAD51B 0 . . . 1.57 68.95 27 5.1 No 37 1.89 Yes 0 0 No -26 0.92 Yes 44 90.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59866373 - NM_032043 BRIP1 0 . . . 1.98 0 23 4.9 No 20 0.22 No 0 0 No -23 0.7 Yes 38 51.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68410337 + NM_133509 RAD51B 0 . . . 4.69 77.26 29 5.93 Yes 8 0.97 Yes 0 0 No -28 0.61 No 50 84.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131915389 + NM_005732 RAD50 0 . . . 4.01 74.13 18 2.8 No 29 0.68 No 0 0 No -32 0.6 No 29 71.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7583427 - NM_000546 TP53 0 . . . 5.06 74.32 18 4.9 No 70 -3.06 No 0 0 No -17 0.74 Yes 44 73.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47656168 + NM_000251 MSH2 0 . . . 3.12 0 22 5.2 No 52 1.08 Yes 0 0 No -21 0.75 Yes 31 82.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190728257 + NM_000534 PMS1 0 . . . 1.47 80.49 35 6 Yes 37 1.12 Yes 0 0 No -34 0.73 Yes 44 70.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68862553 + NM_004360 CDH1 0 . . . 1.15 66.93 30 5.65 Yes 16 0.94 Yes 0 0 No -28 0.72 Yes 42 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94162498 - NM_005591 MRE11 0 . . . 6.17 77.37 45 6.97 Yes 12 0.69 No 0 0 No -26 0.3 No 42 49.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68308604 + NM_133509 RAD51B 0 . . . 6.58 88.36 18 4.58 No 36 1.44 Yes 0 0 No -44 0.8 Yes 49 94.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69087930 + NM_133509 RAD51B 0 . . . 3.29 72.5 33 5.74 Yes 50 0.87 Yes 0 0 No -27 0.66 No 32 48.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59757612 - NM_032043 BRIP1 0 . . . 1.54 84.99 19 4.58 No 33 1.07 Yes 0 0 No -22 0.51 No 50 54.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1220164 + NM_000455 STK11 0 . . . 2.43 69.46 25 5.2 No 17 -1.93 No 0 0 No -22 0.54 No 41 43.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41007307 + NM_001164269 RAD51 0 . . . 0.09 74.68 27 4.93 No 4 0.41 No 0 0 No -26 0.57 No 54 72.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94209042 - NM_005591 MRE11 0 . . . 6.41 84.55 33 4.75 No 52 0.62 No 0 0 No -23 0.53 No 50 66.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47804167 + NM_000251 MSH2 0 . . . 6.44 86.34 22 5.29 No 7 1.27 Yes 0 0 No -53 0.55 No 51 89.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59795110 - NM_032043 BRIP1 0 . . . 2.3 69.7 31 5.91 Yes 59 -4.9 No 0 0 No -30 0.86 Yes 46 33.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90961770 - NM_002485 NBN 0 . . . 5.88 80.03 23 5 No 8 1.25 Yes 0 0 No -22 0.63 No 50 88.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68672662 + NM_133509 RAD51B 0 . . . 4.23 78.07 17 4.8 No 8 1.28 Yes 0 0 No -24 0.47 No 36 37.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47764221 + NM_000251 MSH2 0 . . . 7.07 75.79 64 10.03 Yes 57 1.55 Yes 0 0 No -44 0.39 No 33 67.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68835930 + NM_004360 CDH1 0 . . . 7.08 76.21 22 5.29 No 71 1.1 Yes 0 0 No -24 0.51 No 45 78.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68351493 + NM_133509 RAD51B 0 . . . 5.86 71.02 15 4.58 No 57 1.69 Yes 0 0 No -26 0.63 No 36 93.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69046037 + NM_133509 RAD51B 0 . . . 5.05 87.94 16 6.32 Yes 60 0.54 No 0 0 No -33 0.68 Yes 61 24.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68391076 + NM_133509 RAD51B 0 . . . 4.33 93.92 21 5.87 Yes 44 -1.59 No 0 0 No -20 0.65 No 46 62.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131976227 + NM_005732 RAD50 0 . . . 3.92 79.47 19 4.9 No 51 0.06 No 0 0 No -53 0.79 Yes 52 60.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21965881 - NM_000077 CDKN2A 0 . . . 1.74 0 26 5.3 No 33 1.13 Yes 0 0 No -26 0.51 No 25 79.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84384166 - NM_139076 FAM175A 0 . . . 7.8 79.27 35 6.06 Yes 76 0.93 Yes 0 0 No -27 0.71 Yes 42 72.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108211222 + NM_000051 ATM 0 . . . 6.48 77.28 30 5.35 No 12 0.72 No 0 0 No -29 0.83 Yes 40 59.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47721272 + NM_000251 MSH2 0 . . . 0.32 76.75 29 6.44 Yes 13 0.07 No 0 0 No -28 0.97 Yes 45 90.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59906128 - NM_032043 BRIP1 0 . . . 7.24 84.45 18 5.39 No 9 1.44 Yes 0 0 No -17 0.41 No 49 97.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108148661 + NM_000051 ATM 0 . . . 3.61 80.04 24 5.18 No 50 0.66 No 0 0 No -24 0.6 No 25 65.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68824320 + NM_133509 RAD51B 0 . . . 0.26 61.05 31 4.78 No 70 0.18 No 0 0 No -30 0.67 Yes 44 90.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6025579 - NM_000535 PMS2 0 . . . 5.97 77.05 29 5.38 No -2 0.81 Yes 0 0 No -22 0.46 No 53 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68327462 + NM_133509 RAD51B 0 . . . 2.23 78.61 40 6.25 Yes 57 -5.1 No 0 0 No -33 0.72 Yes 50 43.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47769037 + NM_000251 MSH2 0 . . . 3.1 84.43 21 5.74 Yes 73 0.45 No 0 0 No -20 0.86 Yes 45 51.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52443340 - NM_004656 BAP1 0 . . . 3.62 67.49 19 5.96 Yes 57 1.51 Yes 0 0 No -59 0.64 No 46 63.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68424547 + NM_133509 RAD51B 0 . . . 4.17 75.51 26 5.56 Yes 14 0.68 No 0 0 No -25 0.95 Yes 43 80.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59789429 - NM_032043 BRIP1 0 . . . 3.53 75.13 37 6.25 Yes 57 0.33 No 0 0 No -36 0.47 No 47 87.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59915718 - NM_032043 BRIP1 0 . . . 1.42 72.26 32 6.08 Yes 29 1.02 Yes 0 0 No -17 0.49 No 29 53.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68696070 + NM_133509 RAD51B 0 . . . 0.37 70.19 14 5.39 No 66 -4.71 No 0 0 No -26 0.54 No 30 70.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69025534 + NM_133509 RAD51B 0 . . . 2.72 82.34 26 5.27 No 61 0.9 Yes 0 0 No -26 0.47 No 25 75.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41271672 - NM_007294 BRCA1 0 . . . 5.03 81.8 30 4.62 No 32 0.96 Yes 0 0 No -30 0.61 No 48 84.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105209842 + NM_021930 RINT1 0 . . . 7 74.1 23 6.41 Yes 15 0.88 Yes 0 0 No -25 0.36 No 43 90.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90992418 - NM_002485 NBN 0 . . . 3.02 79.08 26 5.36 No -1 0.19 No 0 0 No -25 0.36 No 49 71.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68520335 + NM_133509 RAD51B 0 . . . 4.67 89 29 4.5 No 3 0.68 No 0 0 No -28 0.91 Yes 50 71.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48025018 + NM_000179 MSH6 0 . . . 6.43 72.75 13 6.08 Yes 26 1.23 Yes 0 0 No -30 0.6 No 47 51.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68922619 + NM_133509 RAD51B 0 . . . 0.3 66.23 36 5.5 No 75 0.75 No 0 0 No -25 0.46 No 49 40.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89733330 + NM_000314 PTEN 0 . . . 0.84 0 44 5.66 Yes 23 1.59 Yes 0 0 No -25 0.65 No 45 62.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68672359 + NM_133509 RAD51B 0 . . . 2.45 80.72 11 4.58 No 66 0.93 Yes 0 0 No -19 0.46 No 23 29.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68788074 + NM_133509 RAD51B 0 . . . 7.83 79.46 27 7.16 Yes 6 2.27 Yes 0 0 No -26 0.64 No 31 97.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68426290 + NM_133509 RAD51B 0 . . . 3.01 61.02 23 4.9 No 76 1.01 Yes 0 0 No -22 0.85 Yes 44 85.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32912779 + NM_000059 BRCA2 0 . . . 7 84.41 21 6.54 Yes 2 1.36 Yes 0 0 No -20 0.57 No 47 76.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108198551 + NM_000051 ATM 0 . . . 4.67 80.21 35 5.83 Yes 2 0.42 No 0 0 No -34 0.48 No 40 94.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68811031 + NM_004360 CDH1 0 . . . 0.45 0 31 6.94 Yes 37 -2.86 No 0 0 No -21 0.35 No 49 28.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47642130 + NM_000251 MSH2 0 . . . 0.21 59.4 26 3.9 No 20 0.55 No 0 0 No -25 0.72 Yes 38 69.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41214378 - NM_007294 BRCA1 0 . . . 1.94 77.06 25 5.17 No 59 1.02 Yes 0 0 No -23 0.51 No 54 65.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68427406 + NM_133509 RAD51B 0 . . . 0.03 83.28 41 6.3 Yes 28 0.96 Yes 0 0 No -33 0.46 No 30 76.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108235978 + NM_000051 ATM 0 . . . 0.78 75.32 23 5.39 No 73 1 Yes 0 0 No -23 0.61 No 51 57.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68418383 + NM_133509 RAD51B 0 . . . 3.5 74.18 21 4.8 No 32 0.13 No 0 0 No -20 0.89 Yes 45 47.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90958075 - NM_002485 NBN 0 . . . 2.56 78.15 38 5.82 Yes 51 0.65 No 0 0 No -28 0.41 No 51 69.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68861956 + NM_133509 RAD51B 0 . . . 0.43 62.87 44 6.78 Yes 71 0.81 Yes 0 0 No -39 0.51 No 34 67.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68450204 + NM_133509 RAD51B 0 . . . 2.89 72.66 27 4.56 No 58 -5.18 No 0 0 No -43 0.33 No 45 85.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215672258 - NM_000465 BARD1 0 . . . 0.07 62 26 6.93 Yes 50 0.42 No 0 0 No -25 0.88 Yes 43 42.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32969672 + NM_000059 BRCA2 0 . . . 8.24 88.01 31 6.3 Yes 50 1.29 Yes 0 0 No -27 0.59 No 48 39.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131961922 + NM_005732 RAD50 0 . . . 4.86 75.92 16 4.69 No 26 -2.92 No 0 0 No -38 0.22 No 50 78.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6028895 - NM_000535 PMS2 0 . . . 4.39 74.22 28 4.73 No 7 1.51 Yes 0 0 No -56 0.76 Yes 51 84.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68791855 + NM_133509 RAD51B 0 . . . 3.48 70.71 31 5.25 No 11 1.77 Yes 0 0 No -26 0.3 No 47 80.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68905565 + NM_133509 RAD51B 0 . . . 5.76 66.39 84 6.67 Yes -4 0.32 No 0 0 No -35 0.94 Yes 44 57.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68311023 + NM_133509 RAD51B 0 . . . 4.96 82.65 18 4.9 No 43 1.18 Yes 0 0 No -23 0.81 Yes 52 41.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59853677 - NM_032043 BRIP1 0 . . . 2.62 69.59 27 5.79 Yes 36 0.55 No 0 0 No -32 0.5 No 40 50.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59804400 - NM_032043 BRIP1 0 . . . 4.53 78.34 35 4.55 No 3 1.5 Yes 0 0 No -22 0.65 No 39 45.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108229715 + NM_000051 ATM 0 . . . 0.46 64.33 15 4 No 62 -5.69 No 0 0 No -31 0.5 No 23 50.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68315472 + NM_133509 RAD51B 0 . . . 2.15 0 33 6.24 Yes 16 1.03 Yes 0 0 No -32 0.72 Yes 42 86.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215654311 - NM_000465 BARD1 0 . . . 2.19 69.77 35 5.86 Yes 1 0.17 No 0 0 No -21 0.61 No 50 69.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68785913 + NM_133509 RAD51B 0 . . . 3.51 70.91 16 4.69 No 17 1.59 Yes 0 0 No -22 0.44 No 41 92.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68566170 + NM_133509 RAD51B 0 . . . 1.53 81.02 16 4.62 No 62 1.35 Yes 0 0 No -21 0.24 No 42 37.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69131160 + NM_133509 RAD51B 0 . . . 4.1 71.55 17 4.58 No 40 0.71 No 0 0 No -35 0.41 No 40 76.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90963574 - NM_002485 NBN 0 . . . 4.1 79.99 20 4.8 No 20 1.83 Yes 0 0 No -18 0.59 No 38 88.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69029665 + NM_133509 RAD51B 0 . . . 3.86 73.4 22 4.9 No 62 -1.53 No 0 0 No -21 0.92 Yes 44 43.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29083036 - NM_001005735 CHEK2 0 . . . 8.16 81.79 34 6.02 Yes 73 1.1 Yes 0 0 No -28 0.79 Yes 48 65.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108125823 + NM_000051 ATM 0 . . . 3.09 70.76 31 5.83 Yes 64 -2.8 No 0 0 No -30 0.84 Yes 44 71.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94215057 - NM_005591 MRE11 0 . . . 6.2 85.38 17 5.55 No 32 1.42 Yes 0 0 No -24 0.44 No 46 75.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190742368 + NM_000534 PMS1 0 . . . 4.3 77.05 52 7.62 Yes 70 1.88 Yes 0 0 No -31 0.58 No 43 93.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32947820 + NM_000059 BRCA2 0 . . . 7.34 87.3 17 3.99 No 71 1.29 Yes 0 0 No -28 0.86 Yes 47 83.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40999006 + NM_001164269 RAD51 0 . . . 0.76 60.94 59 6.39 Yes 15 1.15 Yes 0 0 No -58 0.34 No 43 66.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68805862 + NM_004360 CDH1 0 . . . 8.24 79.11 29 5.67 Yes 62 0.87 Yes 0 0 No -28 0.72 Yes 43 91.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68525628 + NM_133509 RAD51B 0 . . . 2.91 69.36 34 6.24 Yes 29 0.84 Yes 0 0 No -33 0.77 Yes 29 75.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84397654 - NM_139076 FAM175A 0 . . . 2.04 84.6 28 5.39 No 55 1.22 Yes 0 0 No -43 0.61 No 47 47.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108178797 + NM_000051 ATM 0 . . . 6.85 77.29 15 5 No 3 0.51 No 0 0 No -35 0.36 No 40 57.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215625636 - NM_000465 BARD1 0 . . . 1.03 63.56 23 7.35 Yes 56 1.21 Yes 0 0 No -22 0.92 Yes 42 60.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68289767 + NM_133509 RAD51B 0 . . . 3.33 64.46 31 5.64 Yes 37 1.1 Yes 0 0 No -30 0.82 Yes 46 19.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1220092 + NM_000455 STK11 0 . . . 1.69 80.12 24 6.16 Yes 48 0 No 0 0 No -23 0.83 Yes 48 41.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75482622 - NM_001040108 MLH3 0 . . . 5.46 83.01 25 5 No 66 1.3 Yes 0 0 No -24 0.93 Yes 36 71.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45806140 - NM_001048171 MUTYH 0 . . . 2.45 0 31 6.08 Yes 65 0.99 Yes 0 0 No -30 0.73 Yes 36 42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190679411 + NM_000534 PMS1 0 . . . 3.13 73.64 32 5.54 No 4 1.12 Yes 0 0 No -25 0.8 Yes 40 52.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68840389 + NM_133509 RAD51B 0 . . . 3.7 86.21 19 4.23 No -2 0.16 No 0 0 No -40 0.72 Yes 49 42.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215636606 - NM_000465 BARD1 0 . . . 5.25 75.26 16 5.89 Yes 72 -1.39 No 0 0 No -26 0.44 No 46 85.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84394495 - NM_139076 FAM175A 0 . . . 5.76 83.08 20 4.95 No 66 1.19 Yes 0 0 No -27 0.62 No 48 48.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89717371 + NM_000314 PTEN 0 . . . 5.43 71.34 31 5.91 Yes 16 0.55 No 0 0 No -30 0.66 No 42 90.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29106507 - NM_001005735 CHEK2 0 . . . 7.12 84.46 27 5.65 Yes 10 0.94 Yes 0 0 No -25 0.86 Yes 48 84.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29104716 - NM_001005735 CHEK2 0 . . . 2.32 77.34 18 4.69 No 11 1.68 Yes 0 0 No -28 0.36 No 47 73.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75511584 - NM_001040108 MLH3 0 . . . 5.08 74.98 17 6.06 Yes 23 0.91 Yes 0 0 No -31 0.6 No 41 57.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215607869 - NM_000465 BARD1 0 . . . 3.85 71.37 33 5.16 No 10 1.16 Yes 0 0 No -25 0.55 No 33 67.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21986370 - NM_000077 CDKN2A 0 . . . 0.76 76.75 19 4.93 No 7 0.3 No 0 0 No -18 0.43 No 45 93.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68855135 + NM_133509 RAD51B 0 . . . 4.33 83.53 24 6.78 Yes 70 0.75 No 0 0 No -23 0.89 Yes 45 89.96 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68336920 + NM_133509 RAD51B 0 . . . 4.46 80.67 26 7.54 Yes -4 0.55 No 0 0 No -25 0.94 Yes 48 72.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108118485 + NM_000051 ATM 0 . . . 1.84 68.06 19 5.3 No 47 0.56 No 0 0 No -22 0.36 No 48 78.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68775828 + NM_133509 RAD51B 0 . . . 7.5 83.56 48 6.61 Yes 34 0.91 Yes 0 0 No -47 0.59 No 41 93.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23640738 - NM_024675 PALB2 0 . . . 6.94 86.67 12 5.1 No 34 0.45 No 0 0 No -28 0.43 No 41 70.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68738036 + NM_133509 RAD51B 0 . . . 1.2 64.62 15 4.58 No -3 1.01 Yes 0 0 No -45 0.4 No 44 82.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89674885 + NM_000314 PTEN 0 . . . 5.92 82.31 28 5.18 No 59 1.19 Yes 0 0 No -20 0.56 No 48 56.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6017773 - NM_000535 PMS2 0 . . . 11.09 94.52 17 6.93 Yes 5 0.44 No 0 0 No -24 0.42 No 45 82.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94197984 - NM_005591 MRE11 0 . . . 6.6 85.23 53 6.64 Yes 36 -2.11 No 0 0 No -38 0.28 No 39 77.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68496827 + NM_133509 RAD51B 0 . . . 0.67 0 18 4.73 No 22 0.68 No 0 0 No -27 0.48 No 40 69.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37062224 + NM_000249 MLH1 0 . . . 1.84 72.99 26 4.36 No 62 1.38 Yes 0 0 No -25 0.89 Yes 54 26.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94151528 - NM_005591 MRE11 0 . . . 0.3 63.47 19 4.5 No 35 0.29 No 0 0 No -35 0.6 No 37 72.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94193394 - NM_005591 MRE11 0 . . . 0.05 71.03 21 5.2 No 23 -2.74 No 0 0 No -20 0.49 No 22 37.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68931459 + NM_133509 RAD51B 0 . . . 3.61 73.69 25 5.29 No 72 0.86 Yes 0 0 No -25 0.86 Yes 43 61.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68351640 + NM_133509 RAD51B 0 . . . 5.35 80.59 22 4.82 No 31 0.11 No 0 0 No -21 0.73 Yes 45 59.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41278628 - NM_007294 BRCA1 0 . . . 6.17 78.16 19 4.64 No 39 0.89 Yes 0 0 No -18 0.54 No 34 75.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215674543 - NM_000465 BARD1 0 . . . 5.33 0 23 7.74 Yes 9 0.33 No 0 0 No -22 0.83 Yes 49 55.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69106874 + NM_133509 RAD51B 0 . . . 0.14 69.61 30 6.32 Yes 2 1.66 Yes 0 0 No -29 0.79 Yes 44 66.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108131472 + NM_000051 ATM 0 . . . 7.16 79.48 15 5.39 No 30 0.62 No 0 0 No -28 0.29 No 47 66.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69054520 + NM_133509 RAD51B 0 . . . 1.19 61.03 16 4.69 No 55 1.05 Yes 0 0 No -23 0.48 No 51 67.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41236013 - NM_007294 BRCA1 0 . . . 0.23 74.68 20 6.28 Yes 53 0.02 No 0 0 No -19 0.81 Yes 50 87.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131922943 + NM_005732 RAD50 0 . . . 4.99 82.89 10 6.08 Yes 60 1.04 Yes 0 0 No -30 0.81 Yes 48 65.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59801731 - NM_032043 BRIP1 0 . . . 1.42 66.45 15 3.9 No 59 1.62 Yes 0 0 No -26 0.81 Yes 30 57.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1208008 + NM_000455 STK11 0 . . . 6.94 81.6 29 5.48 No 39 1.17 Yes 0 0 No -28 0.9 Yes 29 49.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59796409 - NM_032043 BRIP1 0 . . . 2.13 64.72 24 4.42 No 63 -2.7 No 0 0 No -48 0.66 Yes 40 87.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215600066 - NM_000465 BARD1 0 . . . 10.41 85.9 29 5.29 No 10 1.02 Yes 0 0 No -48 0.83 Yes 48 71.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47682246 + NM_000251 MSH2 0 . . . 1.79 62.86 21 5.64 Yes 28 0.35 No 0 0 No -26 0.76 Yes 29 67.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1229318 + NM_000455 STK11 0 . . . 0.82 61.03 26 5.96 Yes NA NA NA 0 0 No -25 0.86 Yes 14 46.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152373275 - NM_005431 XRCC2 0 . . . 1.79 65.25 16 4.69 No 68 -1.97 No 0 0 No -23 0.89 Yes 29 36.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59782089 - NM_032043 BRIP1 0 . . . 2.99 67.94 16 4.69 No 76 -6.6 No 0 0 No -22 0.6 No 34 53.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68383665 + NM_133509 RAD51B 0 . . . 1.45 74.62 17 5.48 No 61 -3.36 No 0 0 No -25 0.87 Yes 47 36.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68943312 + NM_133509 RAD51B 0 . . . 1.86 72.02 41 7.18 Yes 69 0.39 No 0 0 No -40 0.4 No 43 59.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68631368 + NM_133509 RAD51B 0 . . . 2.77 69 16 4.67 No 13 1.07 Yes 0 0 No -19 0.44 No 45 76.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94225611 - NM_005591 MRE11 0 . . . 1.65 0 18 4.83 No 23 1.19 Yes 0 0 No -26 0.68 Yes 45 77.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68737570 + NM_133509 RAD51B 0 . . . 0.59 0 17 5.25 No 68 0.85 Yes 0 0 No -16 0.39 No 20 80.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68845066 + NM_133509 RAD51B 0 . . . 1.51 0 33 4.97 No 76 0.78 Yes 0 0 No -32 0.7 Yes 41 72.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68583577 + NM_133509 RAD51B 0 . . . 1.96 65.55 17 6.93 Yes 76 0.03 No 0 0 No -16 0.37 No 39 43.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68685369 + NM_133509 RAD51B 0 . . . 0.01 81.69 39 7.28 Yes 3 0.08 No 0 0 No -28 0.69 Yes 42 66.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7578849 - NM_000546 TP53 0 . . . 1.67 66.11 25 6.39 Yes 57 0.54 No 25 0.91 Yes -24 0.71 Yes 42 49.86 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr13 32924236 + NM_000059 BRCA2 0 . . . 0.42 70.53 28 5.28 No 67 1.57 Yes 0 0 No -58 0.75 Yes 43 62.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215589073 - NM_000465 BARD1 0 . . . 1.54 82.9 30 5.25 No 31 1.46 Yes 0 0 No -29 0.71 Yes 27 84.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94212773 - NM_005591 MRE11 0 . . . 1.25 67.99 22 4.69 No 52 0.59 No 0 0 No -21 0.97 Yes 45 78.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23650812 - NM_024675 PALB2 0 . . . 3.46 84.95 58 6.14 Yes 52 0.69 No 0 0 No -50 0.46 No 15 78.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69144728 + NM_133509 RAD51B 0 . . . 1.01 61.9 16 4.73 No 27 0.08 No 0 0 No -18 0.31 No 28 50.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89667612 + NM_000314 PTEN 0 . . . 3.36 76.8 15 6.31 Yes 17 1.24 Yes 0 0 No -35 0.8 Yes 41 78.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59767725 - NM_032043 BRIP1 0 . . . 4.22 68.45 13 5.21 No 2 0.7 No 0 0 No -22 0.66 Yes 41 69.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68967828 + NM_133509 RAD51B 0 . . . 9.3 82.24 24 5.06 No 34 -0.65 No 0 0 No -23 0.67 Yes 48 48.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47641414 + NM_000251 MSH2 0 . . . 1.03 0 15 4.58 No 75 0.13 No 0 0 No -33 0.45 No 41 63.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1209074 + NM_000455 STK11 0 . . . 0.24 0 21 4.94 No 4 0.39 No 0 0 No -20 0.44 No 40 68.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666943 - NM_000465 BARD1 0 . . . 1.98 73.15 26 5.66 Yes 7 1.11 Yes 0 0 No -25 0.92 Yes 51 41.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89648327 + NM_000314 PTEN 0 . . . 2.59 74.21 24 3.79 No 72 1.61 Yes 0 0 No -23 0.64 No 50 60.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45806846 - NM_001048171 MUTYH 0 . . . 2.39 86.29 17 5.74 Yes 65 0.63 No 0 0 No -40 0.33 No 49 50.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32955409 + NM_000059 BRCA2 0 . . . 4.31 74.87 34 5.81 Yes 67 0.07 No 0 0 No -25 0.6 No 50 23.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59935502 - NM_032043 BRIP1 0 . . . 4.16 73.12 17 6.24 Yes 57 0.95 Yes 0 0 No -32 0.43 No 46 41.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68755734 + NM_133509 RAD51B 0 . . . 5.52 81.26 14 6.77 Yes 8 0.72 No 0 0 No -26 0.57 No 46 46.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47757053 + NM_000251 MSH2 0 . . . 1.03 58.83 17 4.06 No 59 0.13 No 0 0 No -29 0.51 No 43 62.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68624522 + NM_133509 RAD51B 0 . . . 4.72 79.1 36 6.04 Yes 69 0.88 Yes 0 0 No -35 0.61 No 41 79.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68807362 + NM_004360 CDH1 0 . . . 2.04 73.25 19 5.23 No 47 0.73 No 0 0 No -34 0.4 No 48 79.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68832669 + NM_133509 RAD51B 0 . . . 3.8 68.51 24 6.15 Yes 32 1.75 Yes 0 0 No -23 0.39 No 43 49.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68549813 + NM_133509 RAD51B 0 . . . 4.32 73.48 26 6.47 Yes 10 0.97 Yes 0 0 No -25 0.9 Yes 48 77.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32899938 + NM_000059 BRCA2 0 . . . 0.64 0 60 8.31 Yes 19 1.71 Yes 0 0 No -37 0.39 No 39 66.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900559 + NM_133509 RAD51B 0 . . . 0.37 0 65 8.35 Yes 5 1.15 Yes 0 0 No -26 0.89 Yes 53 74.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68790843 + NM_133509 RAD51B 0 . . . 2.23 74.84 19 6.07 Yes 2 0.34 No 0 0 No -30 0.9 Yes 38 94.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90977480 - NM_002485 NBN 0 . . . 2 0 18 5.66 Yes 73 -6.22 No 0 0 No -25 0.65 No 47 54.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68789996 + NM_004360 CDH1 0 . . . 5.62 90.07 26 5.19 No 4 0.52 No 0 0 No -25 0.74 Yes 54 61.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104165657 - NM_001100119 XRCC3 0 . . . 3.86 74.35 49 6.73 Yes 3 1.37 Yes 0 0 No -39 0.54 No 48 53.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41257093 - NM_007294 BRCA1 0 . . . 1.83 76.64 25 4.56 No 40 1 Yes 0 0 No -24 0.76 Yes 40 63.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68865745 + NM_004360 CDH1 0 . . . 5.49 80.76 17 4.77 No 63 1.6 Yes 0 0 No -23 0.49 No 49 87.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68965239 + NM_133509 RAD51B 0 . . . 0.76 76.25 22 6.93 Yes 39 1.6 Yes 0 0 No -21 0.82 Yes 45 52.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41195439 - NM_007294 BRCA1 0 . . . 2.49 0 22 6.08 Yes 26 0.96 Yes 0 0 No -21 0.86 Yes 32 72.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68898306 + NM_133509 RAD51B 0 . . . 3.2 72.59 33 7.83 Yes 16 1.28 Yes 0 0 No -32 0.71 Yes 42 93.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47638829 + NM_000251 MSH2 0 . . . 0 85.89 25 5.39 No 42 2.04 Yes 0 0 No -24 0.7 Yes 16 59.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68309503 + NM_133509 RAD51B 0 . . . 6.77 83.73 32 4.53 No 24 0.47 No 0 0 No -27 0.54 No 44 75.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108189387 + NM_000051 ATM 0 . . . 0.02 73.95 19 3.92 No 57 -3.82 No 0 0 No -19 0.62 No 43 39.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68349643 + NM_133509 RAD51B 0 . . . 3.6 85.02 36 6.04 Yes 4 1.2 Yes 0 0 No -25 0.56 No 43 55.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68858059 + NM_133509 RAD51B 0 . . . 2.05 74.8 15 5.39 No 4 1.33 Yes 0 0 No -28 0.34 No 54 34.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190730253 + NM_000534 PMS1 0 . . . 4.39 69.09 32 4.72 No 11 0.94 Yes 0 0 No -27 0.5 No 47 89.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190648672 + NM_000534 PMS1 0 . . . 1.28 0 44 7.07 Yes 62 -0.95 No 0 0 No -43 0.84 Yes 57 25.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68619682 + NM_133509 RAD51B 0 . . . 2 0 11 4.58 No 64 0.53 No 0 0 No -14 0.26 No 38 91.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68897795 + NM_133509 RAD51B 0 . . . 3.71 69.29 17 6.93 Yes 8 0.56 No 0 0 No -24 0.5 No 46 58.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48010038 + NM_000179 MSH6 0 . . . 1.2 70.38 30 5.61 Yes 19 -0.2 No 0 0 No -29 0.49 No 39 42.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131946635 + NM_005732 RAD50 0 . . . 0.34 70.36 21 5.02 No 19 1.77 Yes 0 0 No -20 0.47 No 31 73.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68389249 + NM_133509 RAD51B 0 . . . 9.79 89.34 19 5 No 27 0.36 No 0 0 No -26 0.35 No 40 60.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37038367 + NM_000249 MLH1 0 . . . 3.02 77.43 32 5.63 Yes 29 0.23 No 0 0 No -31 0.91 Yes 36 94.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41249524 - NM_007294 BRCA1 0 . . . 2.09 71.02 33 5.88 Yes 23 1.6 Yes 0 0 No -21 0.58 No 35 70.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59882315 - NM_032043 BRIP1 0 . . . 0.69 65.43 28 5.38 No 74 0.05 No 0 0 No -42 0.48 No 46 19.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190709685 + NM_000534 PMS1 0 . . . 1.59 68.36 29 5.67 Yes 59 1.45 Yes 0 0 No -27 0.4 No 47 89.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68307263 + NM_133509 RAD51B 0 . . . 2.71 60.99 28 6.16 Yes 30 0.28 No 0 0 No -27 0.95 Yes 28 94.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68954020 + NM_133509 RAD51B 0 . . . 1.74 0 33 7.83 Yes 20 0.9 Yes 0 0 No -32 0.68 Yes 38 97.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108168164 + NM_000051 ATM 0 . . . 3.5 68.92 37 6.17 Yes 71 -4.67 No 0 0 No -32 0.52 No 51 45.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68462520 + NM_133509 RAD51B 0 . . . 3.25 80.12 20 3.51 No 8 1.2 Yes 0 0 No -27 0.44 No 50 87.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32970747 + NM_000059 BRCA2 0 . . . 2.19 0 12 4.85 No 15 0.25 No 0 0 No -21 0.72 Yes 43 44.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215625941 - NM_000465 BARD1 0 . . . 5.16 66.49 30 6 Yes 55 0.34 No 0 0 No -29 0.71 Yes 32 31.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190649864 + NM_000534 PMS1 0 . . . 0.48 0 31 5.74 Yes 3 0.62 No 0 0 No -26 0.76 Yes 39 55.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6048188 - NM_000535 PMS2 0 . . . 3.04 79.79 23 5.1 No 29 0.4 No 0 0 No -22 0.88 Yes 17 57.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56793767 + NM_058216 RAD51C 0 . . . 1.15 71.73 32 8.36 Yes 76 0.53 No 0 0 No -27 0.74 Yes 49 72.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105201352 + NM_021930 RINT1 0 . . . 2.68 83.01 26 5.12 No 7 1.86 Yes 0 0 No -25 0.9 Yes 51 80.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6038241 - NM_000535 PMS2 0 . . . 4.58 70.15 26 6.38 Yes 16 1.1 Yes 0 0 No -25 0.79 Yes 42 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47640964 + NM_000251 MSH2 0 . . . 4.04 76.12 20 4.31 No 22 1.35 Yes 0 0 No -26 0.64 No 51 51.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108221620 + NM_000051 ATM 0 . . . 2.46 71.83 39 5.82 Yes 71 -3.59 No 0 0 No -32 0.47 No 32 62.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89639000 + NM_000314 PTEN 0 . . . 1.02 69.51 26 4.58 No 15 0.65 No 0 0 No -26 0.86 Yes 43 86.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21966466 - NM_000077 CDKN2A 0 . . . 1.3 0 16 4.69 No 38 -0.73 No 0 0 No -22 0.21 No 31 68.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68303578 + NM_133509 RAD51B 0 . . . 4.22 71.61 26 5.66 Yes -3 0.51 No 0 0 No -28 0.42 No 50 88.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52442278 - NM_004656 BAP1 0 . . . 11.32 85.71 19 4.42 No 10 1.19 Yes 0 0 No -18 0.78 Yes 48 90.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89685873 + NM_000314 PTEN 0 . . . 1.06 62.43 17 5.66 Yes 32 1.87 Yes 0 0 No -25 0.78 Yes 37 69.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7568459 - NM_000546 TP53 0 . . . 2.95 70.85 13 4.95 No 23 1.58 Yes 0 0 No -20 0.24 No 45 75.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90947729 - NM_002485 NBN 0 . . . 0.36 61.83 34 6.27 Yes 28 0.45 No 0 0 No -33 0.63 No 48 59.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190694822 + NM_000534 PMS1 0 . . . 6.36 87.79 14 5.59 Yes 26 0.37 No 0 0 No -26 0.56 No 49 66.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47673203 + NM_000251 MSH2 0 . . . 3.71 0 23 6.02 Yes 23 0.51 No 0 0 No -22 0.87 Yes 35 81.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69052977 + NM_133509 RAD51B 0 . . . 2.09 64.54 33 6.56 Yes 5 0.18 No 0 0 No -36 0.51 No 53 56.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56795864 + NM_058216 RAD51C 0 . . . 2.85 71.87 19 7.07 Yes 2 1.55 Yes 0 0 No -18 0.55 No 47 84.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47669814 + NM_000251 MSH2 0 . . . 4.01 83.66 15 4.84 No 56 0.67 No 0 0 No -23 0.95 Yes 48 64.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90996839 - NM_002485 NBN 0 . . . 6.28 77.95 26 8.01 Yes 76 -3.17 No 0 0 No -26 0.64 No 37 59.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59834640 - NM_032043 BRIP1 0 . . . 3.57 75.82 32 5.5 No 35 1.06 Yes 0 0 No -31 0.54 No 50 81.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47637655 + NM_000251 MSH2 0 . . . 6.46 86.08 13 4.36 No -2 0.69 No 0 0 No -18 0.51 No 43 84.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59901724 - NM_032043 BRIP1 0 . . . 5.92 83.5 31 6.38 Yes 15 0.33 No 0 0 No -30 0.63 No 43 60.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41022675 + NM_001164269 RAD51 0 . . . 1.52 78.88 40 6.78 Yes 47 -4.49 No 0 0 No -24 0.28 No 45 48.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75518459 - NM_001040108 MLH3 0 . . . 3.59 0 27 5.2 No 12 0.42 No 0 0 No -26 0.33 No 52 67.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29109042 - NM_001005735 CHEK2 0 . . . 1.28 71.11 22 4.94 No 65 -5.49 No 0 0 No -21 0.73 Yes 51 49.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75507993 - NM_001040108 MLH3 0 . . . 0.27 83.38 22 4.8 No 44 2 Yes 0 0 No -21 0.95 Yes 44 45.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68855078 + NM_133509 RAD51B 0 . . . 2.95 70.85 32 5.71 Yes 23 1.58 Yes 0 0 No -27 0.42 No 40 64.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105186240 + NM_021930 RINT1 0 . . . 1.69 73.27 29 5.87 Yes 23 1.4 Yes 0 0 No -28 0.79 Yes 35 60.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131903509 + NM_005732 RAD50 0 . . . 0.9 67.48 36 5.9 Yes 56 0.35 No 0 0 No -26 0.95 Yes 53 52.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56795622 + NM_058216 RAD51C 0 . . . 3.15 68.34 16 5.29 No 23 1.58 Yes 0 0 No -15 0.3 No 40 69.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68316462 + NM_133509 RAD51B 0 . . . 6.77 79.31 10 4 No 5 1.49 Yes 0 0 No -30 0.86 Yes 53 81.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68665083 + NM_133509 RAD51B 0 . . . 2.76 0 18 4.23 No 23 -2.34 No 0 0 No -26 0.74 Yes 50 68.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33425085 - NM_002878 RAD51D 0 . . . 4.63 82.61 16 4.47 No 40 1.11 Yes 0 0 No -21 0.83 Yes 42 74.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190661762 + NM_000534 PMS1 0 . . . 1.73 72.69 28 5.83 Yes 58 -5.5 No 0 0 No -27 0.83 Yes 49 82.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68850378 + NM_004360 CDH1 0 . . . 2.87 60.55 29 4.97 No 16 0.07 No 0 0 No -23 0.62 No 41 61.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108216331 + NM_000051 ATM 0 . . . 7.81 86.49 17 5.61 Yes 5 0.73 No 0 0 No -25 0.46 No 42 56.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29114863 - NM_001005735 CHEK2 0 . . . 0.84 0 45 7.67 Yes -4 -1.24 No 0 0 No -44 0.45 No 16 49.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131901262 + NM_005732 RAD50 0 . . . 7.71 88.38 18 7 Yes 70 1.2 Yes 0 0 No -30 0.53 No 45 91.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68550306 + NM_133509 RAD51B 0 . . . 2.39 65.96 27 5.39 No 58 1.2 Yes 0 0 No -26 0.65 No 53 57.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47640539 + NM_000251 MSH2 0 . . . 6.24 82.31 27 3.75 No 56 1.15 Yes 0 0 No -29 0.41 No 55 56.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131897496 + NM_005732 RAD50 0 . . . 2.83 75.12 15 5.37 No 56 1.1 Yes 0 0 No -20 0.72 Yes 46 82.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7575681 - NM_000546 TP53 0 . . . 2.86 84 11 4.12 No 58 1.8 Yes 0 0 No -31 0.79 Yes 14 73.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56782463 + NM_058216 RAD51C 0 . . . 0.73 73.28 22 4.58 No 2 0.18 No 0 0 No -20 0.3 No 48 75.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45806172 - NM_001048171 MUTYH 0 . . . 4.35 76.72 14 5.46 No 72 1.14 Yes 0 0 No -25 0.72 Yes 47 84.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68850874 + NM_133509 RAD51B 0 . . . 0.83 65.25 20 4.9 No 56 1.14 Yes 0 0 No -19 0.59 No 21 69.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59776344 - NM_032043 BRIP1 0 . . . 3.2 72.59 20 3.69 No 31 0.9 Yes 0 0 No -23 0.94 Yes 42 29.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89669084 + NM_000314 PTEN 0 . . . 6.65 73.75 39 6.89 Yes 6 0.05 No 0 0 No -32 0.4 No 48 85.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190727467 + NM_000534 PMS1 0 . . . 1.64 0 28 6.08 Yes 74 0.13 No 0 0 No -27 0.61 No 31 32.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56784031 + NM_058216 RAD51C 0 . . . 2.86 85.01 66 9.29 Yes 22 0.45 No 0 0 No -30 0.82 Yes 48 79.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68480427 + NM_133509 RAD51B 0 . . . 1.93 57.59 21 4.77 No 47 0.8 Yes 0 0 No -20 0.6 No 45 77.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68959112 + NM_133509 RAD51B 0 . . . 6.59 82.19 47 7.27 Yes 68 0.85 Yes 0 0 No -29 0.45 No 48 74.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48012786 + NM_000179 MSH6 0 . . . 6.75 81.15 14 5.38 No 45 0.66 No 0 0 No -24 0.64 No 52 56.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89651322 + NM_000314 PTEN 0 . . . 0.05 74.31 33 5.99 Yes 56 1.08 Yes 0 0 No -29 0.63 No 55 65.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215611114 - NM_000465 BARD1 0 . . . 2.76 72.93 27 5.63 Yes 14 0.6 No 0 0 No -26 0.6 No 44 74.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68461412 + NM_133509 RAD51B 0 . . . 11.05 85.87 26 5.55 No 29 1.23 Yes 0 0 No -25 0.59 No 46 64.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37067907 + NM_000249 MLH1 0 . . . 6.5 73.46 29 5.9 Yes 24 1 Yes 0 0 No -31 0.49 No 44 62.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47725350 + NM_000251 MSH2 0 . . . 7.71 88.12 50 9.2 Yes 22 1.52 Yes 0 0 No -20 0.49 No 36 96.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152357591 - NM_005431 XRCC2 0 . . . 5.3 88.42 21 5.2 No 29 0.37 No 0 0 No -20 0.52 No 48 81.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105197919 + NM_021930 RINT1 0 . . . 2.89 65.47 28 8.47 Yes 70 -3.92 No 0 0 No -27 0.83 Yes 30 73.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215606037 - NM_000465 BARD1 0 . . . 4.9 77.16 29 5.33 No 22 0.72 No 0 0 No -28 0.72 Yes 36 65.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41017842 + NM_001164269 RAD51 0 . . . 3.56 71.96 13 5.55 No 0 0.53 No 0 0 No -24 0.51 No 42 30.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47671579 + NM_000251 MSH2 0 . . . 5.62 80.44 29 4.8 No 67 -2.27 No 0 0 No -28 0.45 No 47 82.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6032642 - NM_000535 PMS2 0 . . . 5.25 83.38 21 6.27 Yes 5 0.9 Yes 0 0 No -27 0.63 No 45 77.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68973062 + NM_133509 RAD51B 0 . . . 6.92 71.1 25 4.88 No 58 -2.18 No 0 0 No -24 0.79 Yes 28 65.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32971453 + NM_000059 BRCA2 0 . . . 7.68 72.04 27 6.24 Yes 6 0.5 No 0 0 No -26 0.89 Yes 27 60.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68361632 + NM_133509 RAD51B 0 . . . 1.53 61.84 22 4.51 No 25 1 Yes 0 0 No -21 0.83 Yes 46 82.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69058447 + NM_133509 RAD51B 0 . . . 1.77 71.15 60 8.8 Yes 2 1.73 Yes 0 0 No -35 0.83 Yes 42 85.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68760168 + NM_133509 RAD51B 0 . . . 0.97 55.57 16 3.47 No 53 0.55 No 0 0 No -37 0.73 Yes 11 43.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89652554 + NM_000314 PTEN 0 . . . 2.53 63.26 13 5.11 No 74 -5.69 No 0 0 No -21 0.41 No 52 50.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41210193 - NM_007294 BRCA1 0 . . . 2.77 75.84 18 5.43 No 2 1.43 Yes 0 0 No -20 0.61 No 20 75.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108194606 + NM_000051 ATM 0 . . . 0.54 66.37 29 5.91 Yes 48 0.26 No 0 0 No -28 0.68 Yes 48 13.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59841115 - NM_032043 BRIP1 0 . . . 3.17 75.35 13 5.16 No 35 0.97 Yes 0 0 No -25 0.44 No 31 59.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68928461 + NM_133509 RAD51B 0 . . . 5 0 18 5.1 No 19 0.59 No 0 0 No -28 0.52 No 53 45.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68580664 + NM_133509 RAD51B 0 . . . 0.2 0 23 4.69 No 59 0.43 No 0 0 No -22 0.39 No 38 66.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68409092 + NM_133509 RAD51B 0 . . . 1.38 61.2 29 6.73 Yes 57 0.48 No 0 0 No -28 0.85 Yes 51 62.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68299718 + NM_133509 RAD51B 0 . . . 1.2 71.89 23 4.91 No 13 1.13 Yes 0 0 No -22 0.6 No 45 67.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190666699 + NM_000534 PMS1 0 . . . 3.28 57.5 43 6.28 Yes 49 0.78 Yes 0 0 No -38 0.7 Yes 38 48.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23622733 - NM_024675 PALB2 0 . . . 0.09 74.68 20 4.8 No 4 0.41 No 0 0 No -20 0.71 Yes 54 76.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47676752 + NM_000251 MSH2 0 . . . 2.6 83.7 24 5.31 No 37 0.94 Yes 0 0 No -23 0.64 No 31 39.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68620306 + NM_133509 RAD51B 0 . . . 4 74.33 13 4.75 No 44 0.89 Yes 0 0 No -35 0.65 No 35 96.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68785590 + NM_004360 CDH1 0 . . . 2.24 80.12 17 9.43 Yes 7 1.16 Yes 0 0 No -27 0.34 No 51 86.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47748354 + NM_000251 MSH2 0 . . . 1.69 74.25 27 5.65 Yes 8 -0.57 No 0 0 No -26 0.83 Yes 50 64.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152356874 - NM_005431 XRCC2 0 . . . 3.27 63.22 29 4.64 No 60 0.23 No 0 0 No -28 0.47 No 48 59.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68732777 + NM_133509 RAD51B 0 . . . 2.66 73.39 17 5.69 Yes 63 -2.36 No 0 0 No -24 0.68 Yes 30 81.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108123993 + NM_000051 ATM 0 . . . 0.95 69.07 22 4.69 No 0 0.66 No 0 0 No -21 0.97 Yes 46 59.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68393491 + NM_133509 RAD51B 0 . . . 1.28 77.24 32 6.16 Yes 33 1.02 Yes 0 0 No -31 0.94 Yes 25 70.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68719129 + NM_133509 RAD51B 0 . . . 3.27 60.31 25 6.38 Yes 59 -2.1 No 0 0 No -24 0.68 Yes 50 81.42 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89725200 + NM_000314 PTEN 0 . . . 0.07 73.34 39 4.76 No 64 -5.68 No 0 0 No -22 0.67 Yes 43 54.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68685419 + NM_133509 RAD51B 0 . . . 4.99 80.69 14 5.74 Yes 53 0.03 No 0 0 No -21 0.42 No 38 49.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190687542 + NM_000534 PMS1 0 . . . 1.11 74.47 27 6.56 Yes 60 -2.41 No 0 0 No -26 0.68 Yes 42 76.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59901475 - NM_032043 BRIP1 0 . . . 6.62 75.25 36 5.4 No 38 0.33 No 0 0 No -30 0.27 No 39 83.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59772751 - NM_032043 BRIP1 0 . . . 3.11 63.91 17 4.8 No 57 -3.03 No 0 0 No -21 0.49 No 40 42.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152364275 - NM_005431 XRCC2 0 . . . 6.2 81.05 27 4.38 No 57 0.72 No 0 0 No -21 0.84 Yes 43 67.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94155708 - NM_005591 MRE11 0 . . . 4.27 73.28 28 5.35 No 37 1.11 Yes 0 0 No -27 0.63 No 45 90.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68813938 + NM_133509 RAD51B 0 . . . 0.81 73.45 16 4.69 No 0 0.86 Yes 0 0 No -34 0.43 No 39 65.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215630686 - NM_000465 BARD1 0 . . . 1.31 76.29 18 4.69 No 52 -4.42 No 0 0 No -33 0.76 Yes 49 22.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47671421 + NM_000251 MSH2 0 . . . 3.64 66.2 23 4.28 No 63 -1.02 No 0 0 No -22 0.57 No 38 94.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108145726 + NM_000051 ATM 0 . . . 1.16 69.49 25 5.57 Yes 73 0.95 Yes 0 0 No -53 0.79 Yes 43 51.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68622758 + NM_133509 RAD51B 0 . . . 4.28 77.21 17 4.72 No 63 -2.53 No 0 0 No -20 0.49 No 27 83.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69110979 + NM_133509 RAD51B 0 . . . 6 82.72 15 4.39 No 55 0.4 No 0 0 No -23 0.3 No 42 56.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68535911 + NM_133509 RAD51B 0 . . . 5.37 77.06 29 6.32 Yes 51 0.79 Yes 0 0 No -24 0.73 Yes 50 81.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68948434 + NM_133509 RAD51B 0 . . . 1.8 75.16 18 5.75 Yes 52 -2.23 No 0 0 No -22 0.87 Yes 47 34.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23653233 - NM_024675 PALB2 0 . . . 4.45 69.34 49 6.15 Yes 15 -0.68 No 0 0 No -27 0.55 No 43 55.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131921662 + NM_005732 RAD50 0 . . . 6.9 83.73 16 4.58 No 0 1.16 Yes 0 0 No -20 0.38 No 46 79.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29136456 - NM_001005735 CHEK2 0 . . . 0.48 68.33 32 5.5 No 65 -5.81 No 0 0 No -31 0.49 No 60 20.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29092493 - NM_001005735 CHEK2 0 . . . 0.97 77.18 32 5.62 Yes 70 -6.11 No 0 0 No -27 0.59 No 36 82.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47645675 + NM_000251 MSH2 0 . . . 0.49 68.77 28 5.19 No 27 0.37 No 0 0 No -25 0.48 No 14 36.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48012610 + NM_000179 MSH6 0 . . . 0.86 80.02 22 5.1 No 13 1.67 Yes 0 0 No -21 0.69 Yes 45 81.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89655823 + NM_000314 PTEN 0 . . . 7.07 82.2 35 5.21 No 4 1.04 Yes 0 0 No -25 0.26 No 44 67.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41228033 - NM_007294 BRCA1 0 . . . 9.21 90.72 20 5.14 No 9 1.39 Yes 0 0 No -23 0.51 No 49 95.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89679635 + NM_000314 PTEN 0 . . . 5.67 79.53 58 5.31 No 49 0.89 Yes 0 0 No -28 0.47 No 41 77.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68416433 + NM_133509 RAD51B 0 . . . 1.97 71.01 21 6.71 Yes 55 0.57 No 0 0 No -34 0.54 No 47 42.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105186355 + NM_021930 RINT1 0 . . . 2.41 67.57 27 4.5 No 61 1.45 Yes 0 0 No -26 0.79 Yes 39 87.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68540744 + NM_133509 RAD51B 0 . . . 1.39 67.91 29 7.21 Yes 62 0.62 No 0 0 No -29 0.33 No 31 69.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68370487 + NM_133509 RAD51B 0 . . . 9.15 80.05 34 7.7 Yes 33 1.12 Yes 0 0 No -33 0.77 Yes 41 81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69026307 + NM_133509 RAD51B 0 . . . 0.45 74.73 26 4.88 No 32 1.18 Yes 0 0 No -25 0.78 Yes 26 61.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41259444 - NM_007294 BRCA1 0 . . . 4.38 82.97 26 5.05 No 10 0.55 No 0 0 No -19 0.62 No 48 56.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68637341 + NM_133509 RAD51B 0 . . . 4.57 70.07 21 4.68 No 46 1.22 Yes 0 0 No -24 0.47 No 40 56.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59867823 - NM_032043 BRIP1 0 . . . 2.63 68.36 26 6.44 Yes 16 1.29 Yes 0 0 No -25 0.81 Yes 42 91.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68741405 + NM_133509 RAD51B 0 . . . 0.64 70.01 13 4.12 No 61 -5.61 No 0 0 No -49 0.24 No 46 71.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190721094 + NM_000534 PMS1 0 . . . 4.22 81.03 29 6.85 Yes 47 1.32 Yes 0 0 No -28 0.92 Yes 48 67.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21976160 - NM_000077 CDKN2A 0 . . . 5.74 82.31 65 8.28 Yes 58 1.02 Yes 0 0 No -35 0.68 Yes 44 47.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68376547 + NM_133509 RAD51B 0 . . . 0.33 73.36 25 7.04 Yes 3 1.69 Yes 0 0 No -24 0.92 Yes 44 71.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104178988 - NM_001100119 XRCC3 0 . . . 2.84 80.62 15 5.39 No 0 0.94 Yes 0 0 No -14 0.38 No 52 83.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68350019 + NM_133509 RAD51B 0 . . . 0.47 61.32 35 6.24 Yes -4 0.11 No 0 0 No -34 0.94 Yes 44 47.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59770817 - NM_032043 BRIP1 0 . . . 2.42 72.17 26 5.2 No 67 1.02 Yes 0 0 No -20 0.46 No 47 73.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6016066 - NM_000535 PMS2 0 . . . 5.11 90.16 15 5.48 No 67 -3.86 No 0 0 No -23 0.28 No 47 61.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68965140 + NM_133509 RAD51B 0 . . . 8.57 87.06 19 5.21 No 0 0.65 No 0 0 No -22 0.55 No 42 70.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68846030 + NM_133509 RAD51B 0 . . . 3.78 80.93 27 6.24 Yes 2 0.06 No 0 0 No -26 0.79 Yes 46 48.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89656714 + NM_000314 PTEN 0 . . . 1.07 73.51 18 5.57 Yes 18 0.58 No 0 0 No -22 0.34 No 19 80.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68860280 + NM_133509 RAD51B 0 . . . 0.51 72.51 35 7.26 Yes 51 0.41 No 0 0 No -13 0.42 No 45 51.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84380540 - NM_139076 FAM175A 0 . . . 2.54 65.06 25 4.9 No 23 0.67 No 0 0 No -24 0.75 Yes 35 79.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45796777 - NM_001048171 MUTYH 0 . . . 5.7 78.79 21 4.66 No 1 -0.94 No 0 0 No -23 0.82 Yes 46 87.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68375969 + NM_133509 RAD51B 0 . . . 0.16 65.42 28 6.69 Yes -3 1.08 Yes 0 0 No -27 0.87 Yes 61 55.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29135064 - NM_001005735 CHEK2 0 . . . 2.58 75.2 25 4.21 No 34 1.05 Yes 0 0 No -24 0.77 Yes 19 54.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68774226 + NM_133509 RAD51B 0 . . . 1.25 60.1 17 5.74 Yes 56 0.59 No 0 0 No -30 0.46 No 35 85.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41014361 + NM_001164269 RAD51 0 . . . 1.2 74.68 24 5.29 No 72 -4.11 No 0 0 No -21 0.71 Yes 54 70.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68733377 + NM_133509 RAD51B 0 . . . 0.83 78.28 23 6.34 Yes 32 0.76 No 0 0 No -22 0.52 No 26 47.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23644556 - NM_024675 PALB2 0 . . . 1.24 66.92 27 5.2 No 47 -2.12 No 0 0 No -48 0.42 No 45 51.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68909793 + NM_133509 RAD51B 0 . . . 2.14 73.51 26 6.22 Yes 64 1.53 Yes 0 0 No -25 0.89 Yes 51 82.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89654448 + NM_000314 PTEN 0 . . . 3.45 86.89 10 5.2 No 29 1.53 Yes 0 0 No -20 0.28 No 45 82.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47741028 + NM_000251 MSH2 0 . . . 8.21 76.08 18 4.38 No 19 0.95 Yes 0 0 No -27 0.37 No 39 86.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68778602 + NM_004360 CDH1 0 . . . 2.29 80.36 13 4.36 No -3 0.33 No 0 0 No -45 0.3 No 46 75.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68798123 + NM_004360 CDH1 0 . . . 6.87 81.43 25 5.53 No 8 0.13 No 0 0 No -25 0.5 No 47 74.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215603193 - NM_000465 BARD1 0 . . . 3.03 84.34 16 4.6 No 63 1.16 Yes 0 0 No -18 0.8 Yes 49 47.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131900209 + NM_005732 RAD50 0 . . . 1.18 79.54 14 4.9 No 69 -5.45 No 0 0 No -18 0.53 No 43 86.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23640925 - NM_024675 PALB2 0 . . . 7.02 86.03 14 4.47 No 3 0.29 No 0 0 No -33 0.32 No 39 84.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68842593 + NM_133509 RAD51B 0 . . . 0.33 0 31 5.57 Yes 35 -3.11 No 0 0 No -30 0.71 Yes 52 27.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59811685 - NM_032043 BRIP1 0 . . . 3 75.1 15 4.86 No 11 0.18 No 0 0 No -58 0.46 No 48 67.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47775380 + NM_000251 MSH2 0 . . . 1.93 68.6 33 5.74 Yes 54 0.92 Yes 0 0 No -32 0.58 No 52 64.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68692898 + NM_133509 RAD51B 0 . . . 2.02 63.76 16 5.66 Yes 3 0.48 No 0 0 No -33 0.56 No 42 76.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68541728 + NM_133509 RAD51B 0 . . . 6.54 70.42 27 5.2 No 60 0.29 No 0 0 No -26 0.66 Yes 48 81.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68536983 + NM_133509 RAD51B 0 . . . 4.34 89.66 15 4.36 No 16 0.33 No 0 0 No -32 0.88 Yes 51 51.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68492191 + NM_133509 RAD51B 0 . . . 5.07 77.79 18 4.14 No 74 0.51 No 0 0 No -36 0.33 No 42 36.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47663745 + NM_000251 MSH2 0 . . . 5.38 77.59 53 7.94 Yes 57 1.12 Yes 0 0 No -52 0.58 No 51 44.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89678778 + NM_000314 PTEN 0 . . . 7.26 84.32 40 6.23 Yes 44 0.25 No 0 0 No -25 0.39 No 39 59.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68660154 + NM_133509 RAD51B 0 . . . 0.18 76.59 26 5.64 Yes 57 0.34 No 0 0 No -25 0.58 No 40 91.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68805453 + NM_133509 RAD51B 0 . . . 2.37 74.56 29 6.99 Yes 33 0.19 No 0 0 No -28 0.42 No 49 93.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105196983 + NM_021930 RINT1 0 . . . 1.94 56.21 34 5 No 57 0.85 Yes 0 0 No -33 0.78 Yes 40 40.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190720896 + NM_000534 PMS1 0 . . . 7.42 82.63 39 5.55 No 34 1.09 Yes 0 0 No -27 0.53 No 38 93.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215646967 - NM_000465 BARD1 0 . . . 1.28 82.7 40 7.19 Yes 49 1.17 Yes 0 0 No -23 0.77 Yes 43 40.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68786903 + NM_004360 CDH1 0 . . . 1.51 0 27 5.39 No 49 -1.36 No 0 0 No -26 0.83 Yes 36 81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59770334 - NM_032043 BRIP1 0 . . . 2.22 74.91 16 4.69 No 55 1.02 Yes 0 0 No -20 0.6 No 39 51.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59772290 - NM_032043 BRIP1 0 . . . 2.23 77.94 16 5.48 No 25 0.1 No 0 0 No -56 0.49 No 33 63.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68836504 + NM_004360 CDH1 0 . . . 2.69 66.75 24 4.9 No 45 0.99 Yes 0 0 No -23 0.67 Yes 38 35.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94151872 - NM_005591 MRE11 0 . . . 0.95 0 18 5.47 No 29 0.61 No 0 0 No -17 0.44 No 33 89.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68835993 + NM_133509 RAD51B 0 . . . 3.52 64.96 15 5.2 No 65 0.62 No 0 0 No -46 0.33 No 43 59.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68330143 + NM_133509 RAD51B 0 . . . 0.41 69.06 49 9.14 Yes 53 -4.89 No 0 0 No -34 0.58 No 23 60.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33441710 - NM_002878 RAD51D 0 . . . 9.38 81.69 17 4.4 No 52 0.73 No 0 0 No -24 0.84 Yes 49 47.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190737319 + NM_000534 PMS1 0 . . . 0.7 73.43 10 5.2 No 39 -2.41 No 0 0 No -22 0.5 No 31 72.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68850756 + NM_133509 RAD51B 0 . . . 6.95 91.52 27 5.55 No 69 -3.62 No 0 0 No -22 0.57 No 50 34.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68845220 + NM_133509 RAD51B 0 . . . 4.42 73.12 40 6.63 Yes -2 0.03 No 0 0 No -39 0.62 No 48 93.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69128759 + NM_133509 RAD51B 0 . . . 1.69 72.31 23 5.92 Yes 28 1.41 Yes 0 0 No -22 0.83 Yes 40 86.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1204442 + NM_000455 STK11 0 . . . 2.73 69.74 22 4.88 No 42 0.77 Yes 0 0 No -21 0.81 Yes 51 22.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68625903 + NM_133509 RAD51B 0 . . . 0.85 61.71 28 5.29 No 74 -6 No 0 0 No -25 0.4 No 57 35.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69080357 + NM_133509 RAD51B 0 . . . 4.02 80.12 22 6.38 Yes 76 0.86 Yes 0 0 No -21 0.6 No 48 64.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41210030 - NM_007294 BRCA1 0 . . . 3.01 0 9 5.91 Yes 32 1.1 Yes 0 0 No -19 0.74 Yes 34 78.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68764771 + NM_133509 RAD51B 0 . . . 6.19 85 43 6.93 Yes 61 -1.8 No 0 0 No -42 0.53 No 42 48.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59876820 - NM_032043 BRIP1 0 . . . 5.79 69.73 17 6.13 Yes 44 -5.26 No 0 0 No -24 0.89 Yes 47 36.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21988553 - NM_000077 CDKN2A 0 . . . 4.9 70.47 18 4.55 No 52 1.58 Yes 0 0 No -17 0.85 Yes 43 63.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33427010 - NM_002878 RAD51D 0 . . . 1.6 0 45 6.44 Yes 26 0.88 Yes 0 0 No -29 0.82 Yes 45 43.89 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69112807 + NM_133509 RAD51B 0 . . . 5.2 69.89 61 7.05 Yes 66 -3.39 No 0 0 No -28 0.94 Yes 37 75.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190708386 + NM_000534 PMS1 0 . . . 4.7 90.24 34 4.33 No 5 0.39 No 0 0 No -33 0.45 No 49 94.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1219404 + NM_000455 STK11 0 . . . 0.22 0 31 5.57 Yes 60 -3.66 No 0 0 No -30 0.94 Yes 47 48.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673238 + NM_000534 PMS1 0 . . . 6.97 83.74 19 4.76 No 74 0.07 No 0 0 No -18 0.67 Yes 37 47.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84401051 - NM_139076 FAM175A 0 . . . 2.53 76.44 24 6.54 Yes 73 0.73 No 0 0 No -22 0.6 No 44 53.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47646559 + NM_000251 MSH2 0 . . . 2.33 84.17 13 5.09 No 34 0.5 No 0 0 No -21 0.73 Yes 54 24.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68618474 + NM_133509 RAD51B 0 . . . 3.69 73.77 15 3.37 No 71 1.44 Yes 0 0 No -24 0.52 No 46 55.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47785428 + NM_000251 MSH2 0 . . . 2.31 72.9 18 5 No 70 -4.44 No 0 0 No -22 0.77 Yes 41 61.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108130331 + NM_000051 ATM 0 . . . 2.87 71.57 21 4.84 No 34 1.04 Yes 0 0 No -25 0.38 No 47 61.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47757840 + NM_000251 MSH2 0 . . . 5.19 80.27 13 4.01 No 48 0.82 Yes 0 0 No -21 0.5 No 43 91.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131928318 + NM_005732 RAD50 0 . . . 9.24 85.34 15 3.71 No 55 1.43 Yes 0 0 No -22 0.9 Yes 40 43.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108129086 + NM_000051 ATM 0 . . . 3.79 63.42 48 5.01 No 49 0.89 Yes 0 0 No -25 0.9 Yes 45 69.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47671829 + NM_000251 MSH2 0 . . . 2.64 78.6 18 3.49 No 76 -4.76 No 0 0 No -24 0.44 No 49 60.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68789359 + NM_004360 CDH1 0 . . . 1.63 82.3 9 5.83 Yes 41 0.26 No 0 0 No -27 0.83 Yes 44 21.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47647118 + NM_000251 MSH2 0 . . . 3.09 68.95 26 4.71 No 16 1.1 Yes 0 0 No -25 0.8 Yes 42 91.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68692058 + NM_133509 RAD51B 0 . . . 2.53 69.46 28 5.48 No 39 0.94 Yes 0 0 No -27 0.67 Yes 40 73.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131913460 + NM_005732 RAD50 0 . . . 4.84 87.17 29 4.95 No 57 0.89 Yes 0 0 No -28 0.68 Yes 28 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68444727 + NM_133509 RAD51B 0 . . . 6.56 78.76 56 7.48 Yes 44 0.23 No 0 0 No -38 0.46 No 26 68.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104172493 - NM_001100119 XRCC3 0 . . . 0.16 0 18 5.3 No 56 1.43 Yes 0 0 No -24 0.85 Yes 37 34.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215608592 - NM_000465 BARD1 0 . . . 2.33 72.15 20 4.83 No 54 -5.07 No 0 0 No -19 0.62 No 48 45.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68585365 + NM_133509 RAD51B 0 . . . 5.84 71.23 23 3.85 No 68 -4.54 No 0 0 No -22 0.62 No 51 49.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108107590 + NM_000051 ATM 0 . . . 4.1 75.51 15 5.17 No 69 -4.64 No 0 0 No -50 0.8 Yes 52 58.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90978424 - NM_002485 NBN 0 . . . 2 73.22 17 7.53 Yes 36 1.92 Yes 0 0 No -28 0.41 No 22 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68919726 + NM_133509 RAD51B 0 . . . 0.17 66.75 21 5.51 No 58 0.93 Yes 0 0 No -24 0.83 Yes 47 56.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47760385 + NM_000251 MSH2 0 . . . 7.05 82.31 39 7.1 Yes 58 1.16 Yes 0 0 No -38 0.71 Yes 55 56.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68365949 + NM_133509 RAD51B 0 . . . 7 85.02 23 4.09 No 12 1.45 Yes 0 0 No -45 0.65 No 46 95.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89711948 + NM_000314 PTEN 0 . . . 1.78 71.54 50 7 Yes 9 -2.16 No 0 0 No -23 0.53 No 50 71.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69058634 + NM_133509 RAD51B 0 . . . 4.13 69.48 13 4.96 No 39 1.58 Yes 0 0 No -23 0.49 No 33 81.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68822698 + NM_133509 RAD51B 0 . . . 4.32 74.78 26 5.92 Yes 9 0.71 No 0 0 No -26 0.5 No 49 51.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68950774 + NM_133509 RAD51B 0 . . . 3.56 88.57 9 4.8 No 14 0.67 No 0 0 No -25 0.44 No 48 87.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94149821 - NM_005591 MRE11 0 . . . 3.46 83 21 4.9 No 43 1.59 Yes 0 0 No -20 0.68 Yes 15 93.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105204744 + NM_021930 RINT1 0 . . . 4.67 80.18 30 6.32 Yes 32 1.16 Yes 0 0 No -29 0.44 No 43 58.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33425300 - NM_002878 RAD51D 0 . . . 1.78 76.63 27 5.29 No 45 -3.82 No 0 0 No -26 0.78 Yes 39 62.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108114772 + NM_000051 ATM 0 . . . 2.06 76.24 27 4.96 No 61 -5.16 No 0 0 No -26 0.73 Yes 47 42.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69086301 + NM_133509 RAD51B 0 . . . 1.41 83 37 6.54 Yes 70 -5.61 No 0 0 No -25 0.57 No 51 59.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23632430 - NM_024675 PALB2 0 . . . 1.41 84.22 29 7.34 Yes 33 1.14 Yes 0 0 No -28 0.91 Yes 50 75.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68572276 + NM_133509 RAD51B 0 . . . 3.38 78.76 28 5.07 No 44 -1.2 No 0 0 No -30 0.62 No 40 68.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69138249 + NM_133509 RAD51B 0 . . . 3.84 68.39 28 5.31 No 40 1.27 Yes 0 0 No -28 0.43 No 51 49.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90966472 - NM_002485 NBN 0 . . . 5.51 66.5 19 4.69 No 65 1.35 Yes 0 0 No -24 0.63 No 43 83.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47789312 + NM_000251 MSH2 0 . . . 3.22 73.93 29 7.44 Yes 57 -3.08 No 0 0 No -28 0.48 No 50 29.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32962028 + NM_000059 BRCA2 0 . . . 2.05 65.05 24 6.07 Yes 9 1.05 Yes 0 0 No -23 0.82 Yes 35 79.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68830107 + NM_133509 RAD51B 0 . . . 1.87 67.14 35 6.09 Yes 30 0.69 No 0 0 No -26 0.74 Yes 44 54.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68889248 + NM_133509 RAD51B 0 . . . 0.09 76.63 18 5.46 No 57 -3.81 No 0 0 No -24 0.78 Yes 43 38.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29127420 - NM_001005735 CHEK2 0 . . . 3.89 84.99 17 4.47 No 8 0.86 Yes 0 0 No -29 0.15 No 50 89.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190674210 + NM_000534 PMS1 0 . . . 2.13 82.94 29 5.8 Yes 39 0.13 No 0 0 No -25 0.43 No 26 55.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215670112 - NM_000465 BARD1 0 . . . 2.83 73.67 22 5.29 No 17 0.52 No 0 0 No -21 0.88 Yes 41 35.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23612570 - NM_024675 PALB2 0 . . . 0.2 78.65 15 4.23 No 6 0.76 No 0 0 No -47 0.58 No 52 55.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848094 - NM_032043 BRIP1 0 . . . 3.45 0 19 4.9 No 49 2.4 Yes 0 0 No -18 0.79 Yes 42 55.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47726044 + NM_000251 MSH2 0 . . . 2.11 84.22 24 6.05 Yes 75 1.48 Yes 0 0 No -23 0.52 No 50 80.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68658053 + NM_133509 RAD51B 0 . . . 3.25 83.02 13 4.36 No 74 0.26 No 0 0 No -35 0.55 No 54 46.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48010285 + NM_000179 MSH6 0 . . . 6.71 79.74 22 5.52 No 37 -1.33 No 0 0 No -21 0.52 No 53 47.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68573669 + NM_133509 RAD51B 0 . . . 8.64 84.3 19 6.63 Yes -3 0.27 No 0 0 No -26 0.49 No 43 56.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131920961 + NM_005732 RAD50 0 . . . 3.36 69.13 31 5.47 No 75 -6.44 No 0 0 No -28 0.7 Yes 48 59.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69028577 + NM_133509 RAD51B 0 . . . 6.31 78.83 18 4.24 No 65 -3.01 No 0 0 No -41 0.85 Yes 37 86.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68841161 + NM_133509 RAD51B 0 . . . 7.15 89.6 24 5.27 No 13 1.54 Yes 0 0 No -23 0.78 Yes 45 95.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47672713 + NM_000251 MSH2 0 . . . 0.39 80.12 26 5.29 No 58 0.55 No 0 0 No -25 0.92 Yes 15 34.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108127726 + NM_000051 ATM 0 . . . 6.98 77.37 54 7.28 Yes 72 -1.86 No 0 0 No -46 0.43 No 46 57.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950702 + NM_005732 RAD50 0 . . . 0.73 0 35 5.92 Yes 75 0.72 No 0 0 No -25 0.7 Yes 26 63.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68426082 + NM_133509 RAD51B 0 . . . 5.21 84.22 17 4.69 No 33 1.05 Yes 0 0 No -34 0.56 No 50 95.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68386769 + NM_133509 RAD51B 0 . . . 0.28 62.81 21 4.69 No 48 0.11 No 0 0 No -20 0.96 Yes 46 44.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56783383 + NM_058216 RAD51C 0 . . . 2.27 73.98 53 6.62 Yes 27 0.5 No 0 0 No -42 0.43 No 48 47.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108172551 + NM_000051 ATM 0 . . . 1.38 73.37 20 5.83 Yes 8 0.41 No 0 0 No -31 0.68 Yes 47 69.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215603539 - NM_000465 BARD1 0 . . . 0.68 69.95 36 8.31 Yes 34 0.49 No 0 0 No -38 0.51 No 34 57.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68773537 + NM_004360 CDH1 0 . . . 4.74 84.41 14 5.12 No 18 1.16 Yes 0 0 No -21 0.25 No 40 72.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75514522 - NM_001040108 MLH3 0 . . . 1.77 68.92 25 5.19 No -2 0.22 No 0 0 No -24 0.88 Yes 41 57.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68610578 + NM_133509 RAD51B 0 . . . 5.49 74.78 23 4.58 No 11 0.65 No 0 0 No -35 0.74 Yes 41 65.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131925126 + NM_005732 RAD50 0 . . . 3.58 74.81 23 5.39 No 76 -3.59 No 0 0 No -22 0.63 No 36 76.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68324572 + NM_133509 RAD51B 0 . . . 5.54 82.99 21 4.58 No 48 -2.93 No 25 0.62 Yes -20 0.45 No 39 70.05 Yes BPP: No, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 68488208 + NM_133509 RAD51B 0 . . . 9.28 76.75 18 7.55 Yes 9 1.24 Yes 0 0 No -24 0.36 No 49 73.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41211915 - NM_007294 BRCA1 0 . . . 1.14 61.93 33 6.24 Yes 69 -2.15 No 0 0 No -33 0.72 Yes 44 41.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131899046 + NM_005732 RAD50 0 . . . 7.25 80.34 22 4.58 No 2 -1.36 No 0 0 No -19 0.45 No 46 66.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47799962 + NM_000251 MSH2 0 . . . 2.26 0 9 3.83 No 42 0.33 No 0 0 No -33 0.8 Yes 28 55.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68458766 + NM_133509 RAD51B 0 . . . 3.32 76.46 18 4.9 No 22 0.45 No 0 0 No -25 0.49 No 36 70.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47761351 + NM_000251 MSH2 0 . . . 1.2 75.95 17 4.58 No 34 0.99 Yes 0 0 No -21 0.38 No 24 42.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108185293 + NM_000051 ATM 0 . . . 6.79 82.62 17 5.36 No 57 0.05 No 0 0 No -26 0.62 No 52 83.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59928022 - NM_032043 BRIP1 0 . . . 4.6 77.86 23 4.83 No 63 1.37 Yes 0 0 No -22 0.74 Yes 51 78.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41203498 - NM_007294 BRCA1 0 . . . 3.6 76.69 16 5.74 Yes 70 -4.21 No 0 0 No -24 0.49 No 41 45.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23646675 - NM_024675 PALB2 0 . . . 2.52 78.67 22 5.26 No 72 -3.23 No 0 0 No -22 0.47 No 50 67.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32904552 + NM_000059 BRCA2 0 . . . 8.31 81.91 15 5.29 No 74 0.6 No 0 0 No -43 0.92 Yes 39 79.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68643559 + NM_133509 RAD51B 0 . . . 2.95 78.36 16 5.62 Yes 76 -6.33 No 0 0 No -26 0.62 No 51 72.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68982865 + NM_133509 RAD51B 0 . . . 0.26 0 38 6.24 Yes 12 0.27 No 0 0 No -25 0.44 No 41 88.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68923893 + NM_133509 RAD51B 0 . . . 2.58 68.34 28 5.82 Yes 5 1.83 Yes 0 0 No -27 0.8 Yes 40 66.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47719823 + NM_000251 MSH2 0 . . . 6.4 84.01 16 4.26 No 4 0.88 Yes 0 0 No -48 0.78 Yes 42 81.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190684350 + NM_000534 PMS1 0 . . . 6.66 80.22 24 4.86 No 36 0.67 No 0 0 No -24 0.32 No 43 97.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68630357 + NM_133509 RAD51B 0 . . . 6.28 76.78 39 6.78 Yes 14 1.63 Yes 0 0 No -28 0.91 Yes 43 87.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68632863 + NM_133509 RAD51B 0 . . . 0.04 65.36 9 5 No 15 0.22 No 0 0 No -25 0.34 No 43 58.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90980927 - NM_002485 NBN 0 . . . 1.3 83.64 24 4.79 No 22 0.55 No 0 0 No -21 0.66 No 59 53.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59892379 - NM_032043 BRIP1 0 . . . 5.95 74.84 22 5.1 No 3 1.52 Yes 0 0 No -21 0.87 Yes 39 70.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108166317 + NM_000051 ATM 0 . . . 1.73 74.34 34 5.74 Yes 3 0.83 Yes 0 0 No -28 0.49 No 50 86.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29119485 - NM_001005735 CHEK2 0 . . . 4.42 84.22 27 5.29 No 8 1.13 Yes 0 0 No -24 0.55 No 50 91.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29124717 - NM_001005735 CHEK2 0 . . . 3.12 77.99 18 3.31 No 1 0.23 No 0 0 No -27 0.38 No 45 61.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108170945 + NM_000051 ATM 0 . . . 0.08 0 20 4.45 No 64 -3.88 No 0 0 No -19 0.92 Yes 42 42.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68996602 + NM_133509 RAD51B 0 . . . 4.36 75.72 14 5.74 Yes 5 0.86 Yes 0 0 No -47 0.43 No 42 77.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75499910 - NM_001040108 MLH3 0 . . . 1.97 77.18 42 6.7 Yes 20 0.52 No 0 0 No -28 0.69 Yes 38 89.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69052102 + NM_133509 RAD51B 0 . . . 0.01 68.57 43 6.67 Yes 73 0.64 No 0 0 No -25 0.54 No 42 65.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849825 - NM_032043 BRIP1 0 . . . 7.17 89.78 16 5.07 No 59 0.11 No 0 0 No -23 0.84 Yes 46 53.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90946505 - NM_002485 NBN 0 . . . 0.38 65.13 23 5.37 No 36 -3.96 No 0 0 No -22 0.79 Yes 52 42.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89647456 + NM_000314 PTEN 0 . . . 6.55 84.64 17 4.8 No 9 0.06 No 0 0 No -22 0.48 No 49 72.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190663442 + NM_000534 PMS1 0 . . . 1.84 0 46 6.74 Yes -2 0.27 No 0 0 No -31 0.84 Yes 45 36.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68547452 + NM_133509 RAD51B 0 . . . 4.97 66.48 17 5.81 Yes 21 1.11 Yes 0 0 No -25 0.48 No 41 64.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69057173 + NM_133509 RAD51B 0 . . . 7.45 78.66 22 4.98 No 41 1.54 Yes 0 0 No -22 0.77 Yes 53 46.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131976692 + NM_005732 RAD50 0 . . . 4.49 78.14 27 5.2 No 24 -2.31 No 0 0 No -26 0.7 Yes 48 71.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37088142 + NM_000249 MLH1 0 . . . 3.75 84.95 29 6.3 Yes 76 0.09 No 0 0 No -28 0.85 Yes 17 37.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47658763 + NM_000251 MSH2 0 . . . 0.66 59.09 31 5.48 No 70 0.9 Yes 0 0 No -30 0.73 Yes 36 52.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7569546 - NM_000546 TP53 0 . . . 1.61 81.7 25 4.49 No 33 0.32 No 0 0 No -25 0.52 No 24 52.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68636941 + NM_133509 RAD51B 0 . . . 4.63 76.87 33 5.72 Yes 25 -2.28 No 0 0 No -32 0.53 No 40 43.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68335257 + NM_133509 RAD51B 0 . . . 1.09 0 80 9.5 Yes 49 -2.68 No 0 0 No -30 0.78 Yes 34 70.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68809660 + NM_004360 CDH1 0 . . . 3.41 75.74 33 4.95 No 15 0.53 No 0 0 No -24 0.65 No 51 58.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89659059 + NM_000314 PTEN 0 . . . 1.95 79.25 30 5.46 No 31 1.47 Yes 0 0 No -23 0.56 No 35 84.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68684314 + NM_133509 RAD51B 0 . . . 0.98 0 36 5.85 Yes 66 1.2 Yes 0 0 No -35 0.63 No 57 33.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68591422 + NM_133509 RAD51B 0 . . . 0.13 74.23 32 6.12 Yes 70 0.25 No 0 0 No -31 0.65 No 54 77.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75514179 - NM_001040108 MLH3 0 . . . 0.5 69.71 20 3.44 No 34 1.33 Yes 0 0 No -22 0.36 No 24 64.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32958935 + NM_000059 BRCA2 0 . . . 0.44 71.4 13 7.89 Yes 64 -5.64 No 0 0 No -36 0.42 No 52 73.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68429676 + NM_133509 RAD51B 0 . . . 0.37 51.99 58 8.09 Yes 38 0.86 Yes 0 0 No -32 0.53 No 42 40.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108204420 + NM_000051 ATM 0 . . . 4.46 69.93 26 4.77 No 8 0.96 Yes 0 0 No -20 0.39 No 50 75.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94177405 - NM_005591 MRE11 0 . . . 3.83 75.91 25 6 Yes 61 0.08 No 0 0 No -28 0.8 Yes 50 63.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68820697 + NM_133509 RAD51B 0 . . . 2.97 69.61 21 5.2 No 21 0.32 No 0 0 No -20 0.3 No 41 62.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94174976 - NM_005591 MRE11 0 . . . 2.24 80.12 23 5.31 No 7 1.16 Yes 0 0 No -27 0.84 Yes 51 74.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7579452 - NM_000546 TP53 0 . . . 4.34 74.96 32 5.05 No 72 -2.73 No 0 0 No -31 0.68 Yes 37 43.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89632356 + NM_000314 PTEN 0 . . . 3.8 83.36 16 4.26 No 12 -1.88 No 0 0 No -30 0.47 No 48 89.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68907647 + NM_133509 RAD51B 0 . . . 2.01 67.84 17 4.77 No 59 0.9 Yes 0 0 No -24 0.72 Yes 45 70.97 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59863373 - NM_032043 BRIP1 0 . . . 6.61 86.52 27 4.62 No 10 0.07 No 0 0 No -26 0.54 No 48 91.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47734120 + NM_000251 MSH2 0 . . . 8.2 82.24 21 5.1 No 14 0.38 No 0 0 No -45 0.63 No 49 65.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89653616 + NM_000314 PTEN 0 . . . 7.95 88.38 21 4.69 No 52 0.6 No 0 0 No -21 0.32 No 52 49.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89723281 + NM_000314 PTEN 0 . . . 0.79 71.52 16 4.69 No 75 -5.76 No 0 0 No -21 0.62 No 52 34.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108164280 + NM_000051 ATM 0 . . . 2.48 70.18 14 5.38 No -3 0.55 No 0 0 No -22 0.77 Yes 43 78.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69067192 + NM_133509 RAD51B 0 . . . 6.03 87.19 32 5.56 Yes 21 0.35 No 0 0 No -28 0.45 No 47 53.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68497745 + NM_133509 RAD51B 0 . . . 3.7 67.12 17 5.83 Yes 19 0.13 No 0 0 No -58 0.54 No 52 52.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68528825 + NM_133509 RAD51B 0 . . . 3.14 87.22 12 4.69 No 6 1.1 Yes 0 0 No -38 0.59 No 48 63.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68785899 + NM_004360 CDH1 0 . . . 4.75 84 42 7.21 Yes 49 1.64 Yes 0 0 No -22 0.69 Yes 17 54.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47712315 + NM_000251 MSH2 0 . . . 0.7 68 23 5.38 No 58 0.77 Yes 0 0 No -22 0.62 No 44 35.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59908903 - NM_032043 BRIP1 0 . . . 2.9 63.02 26 5.02 No 6 0.25 No 0 0 No -28 0.55 No 52 65.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56788433 + NM_058216 RAD51C 0 . . . 1.45 59.97 24 5.48 No 51 0.47 No 0 0 No -23 0.74 Yes 22 72.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47732832 + NM_000251 MSH2 0 . . . 6.5 80.13 20 4.16 No 40 1.02 Yes 0 0 No -40 0.62 No 45 88.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68914269 + NM_133509 RAD51B 0 . . . 1 64.72 29 4.89 No 23 0.47 No 0 0 No -24 0.46 No 29 58.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59849020 - NM_032043 BRIP1 0 . . . 2.65 79.95 31 4.16 No 5 0.86 Yes 0 0 No -24 0.53 No 47 66.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68892264 + NM_133509 RAD51B 0 . . . 0.99 65.92 15 4.47 No 24 1.2 Yes 0 0 No -45 0.3 No 12 69.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47738147 + NM_000251 MSH2 0 . . . 0.47 0 18 6.36 Yes 60 1.22 Yes 0 0 No -21 0.44 No 18 66.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89670784 + NM_000314 PTEN 0 . . . 5.28 75.05 39 6.24 Yes 5 -2.43 No 0 0 No -22 0.46 No 45 72.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48029351 + NM_000179 MSH6 0 . . . 3.3 77.93 32 6.22 Yes -1 0.42 No 0 0 No -35 0.43 No 38 88.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68939699 + NM_133509 RAD51B 0 . . . 1.34 60.39 47 7.68 Yes 28 1.35 Yes 0 0 No -24 0.73 Yes 30 96.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94190747 - NM_005591 MRE11 0 . . . 3.13 59.47 45 7.68 Yes 18 2.23 Yes 0 0 No -35 0.38 No 40 90.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68834522 + NM_004360 CDH1 0 . . . 0.2 72.94 18 4.47 No 40 -3.72 No 0 0 No -55 0.68 Yes 50 59.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215627282 - NM_000465 BARD1 0 . . . 7.26 80 22 4.03 No 15 0.77 Yes 0 0 No -27 0.72 Yes 43 70.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56769776 + NM_058216 RAD51C 0 . . . 9.2 84.23 34 5.8 Yes NA NA NA 0 0 No -21 0.65 No 45 90.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68816534 + NM_133509 RAD51B 0 . . . 0.07 80.34 16 5.29 No 70 1.89 Yes 0 0 No -26 0.74 Yes 43 89.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108116381 + NM_000051 ATM 0 . . . 0.1 0 29 5.29 No 55 0.77 No 0 0 No -28 0.76 Yes 51 56.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59795505 - NM_032043 BRIP1 0 . . . 0.26 68.82 14 3.58 No 1 0.06 No 0 0 No -22 0.84 Yes 57 21.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94158702 - NM_005591 MRE11 0 . . . 4.47 77.82 40 7.42 Yes 41 0.4 No 0 0 No -19 0.67 Yes 45 79.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56785529 + NM_058216 RAD51C 0 . . . 9.26 90.85 24 5.48 No 25 1.08 Yes 0 0 No -23 0.92 Yes 48 52.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105182521 + NM_021930 RINT1 0 . . . 4.6 74.86 15 5.44 No 3 0.35 No 0 0 No -23 0.78 Yes 46 69.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6016022 - NM_000535 PMS2 0 . . . 7.6 84.72 22 5.91 Yes 11 1.37 Yes 0 0 No -21 0.62 No 47 79.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68857014 + NM_133509 RAD51B 0 . . . 4.7 75.42 27 5.57 Yes 2 0.09 No 0 0 No -24 0.38 No 45 72.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7584248 - NM_000546 TP53 0 . . . 1.66 77.52 18 4.67 No 8 1.32 Yes 0 0 No -22 0.55 No 50 87.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68849186 + NM_133509 RAD51B 0 . . . 0.97 80.66 11 4.12 No 16 0.31 No 0 0 No -23 0.62 No 48 58.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108198271 + NM_000051 ATM 0 . . . 5.3 72.26 20 5.06 No 69 0.28 No 0 0 No -20 0.3 No 42 44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69047370 + NM_133509 RAD51B 0 . . . 8 78.1 25 4.81 No 33 1.32 Yes 0 0 No -28 0.45 No 36 81.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68769738 + NM_004360 CDH1 0 . . . 3.25 80.12 31 5.57 Yes 8 1.2 Yes 0 0 No -25 0.36 No 50 87.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6014590 - NM_000535 PMS2 0 . . . 0.45 65.86 27 5.27 No 9 0.65 No 0 0 No -32 0.66 No 41 51.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68620363 + NM_133509 RAD51B 0 . . . 4.13 78.53 18 4.61 No 37 0.67 No 0 0 No -28 0.43 No 39 56.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131967288 + NM_005732 RAD50 0 . . . 6.06 86.91 13 4.36 No 59 -2.2 No 0 0 No -35 0.69 Yes 38 50.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59873725 - NM_032043 BRIP1 0 . . . 2.12 67.07 18 5.57 Yes 56 -4.74 No 0 0 No -26 0.48 No 35 44.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69084241 + NM_133509 RAD51B 0 . . . 0.91 71.86 36 4.98 No 67 0.34 No 0 0 No -24 0.72 Yes 52 79.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68752476 + NM_133509 RAD51B 0 . . . 4.63 69.04 34 6.24 Yes 11 0.6 No 0 0 No -34 0.32 No 47 77.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108122808 + NM_000051 ATM 0 . . . 9.01 92.65 17 5.76 Yes 31 -1.47 No 0 0 No -39 0.31 No 39 69.69 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59831009 - NM_032043 BRIP1 0 . . . 1.04 76.63 26 5.1 No 66 -5.44 No 0 0 No -19 0.44 No 50 57.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68829151 + NM_133509 RAD51B 0 . . . 6.66 82.94 15 4.58 No 34 0.9 Yes 0 0 No -19 0.62 No 49 53.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131969952 + NM_005732 RAD50 0 . . . 0.5 0 23 4.81 No 24 1.17 Yes 0 0 No -22 0.71 Yes 34 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68732190 + NM_133509 RAD51B 0 . . . 2.66 76.03 17 4.11 No 0 0.74 No 0 0 No -27 0.33 No 47 54.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47804053 + NM_000251 MSH2 0 . . . 0.92 68.38 18 4.69 No 28 1.44 Yes 0 0 No -26 0.72 Yes 54 73.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94210922 - NM_005591 MRE11 0 . . . 8.04 91.03 39 6.65 Yes 11 1.06 Yes 0 0 No -23 0.9 Yes 47 86.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84403842 - NM_139076 FAM175A 0 . . . 2.98 0 32 4.07 No 40 2.35 Yes 0 0 No -31 0.32 No 18 87.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89720487 + NM_000314 PTEN 0 . . . 1.94 72.27 18 5.03 No 9 0.48 No 0 0 No -28 0.46 No 53 56.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68314301 + NM_133509 RAD51B 0 . . . 6.31 73.02 31 6.61 Yes 60 1.19 Yes 0 0 No -30 0.9 Yes 39 55.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41001673 + NM_001164269 RAD51 0 . . . 3.8 74.86 28 5.34 No 13 1.01 Yes 0 0 No -27 0.65 No 45 91.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32893456 + NM_000059 BRCA2 0 . . . 0.15 61.02 15 5.63 Yes 40 1.85 Yes 0 0 No -26 0.72 Yes 63 17.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75490535 - NM_001040108 MLH3 0 . . . 0.93 74.01 32 7.06 Yes 67 0.91 Yes 0 0 No -31 0.44 No 54 63.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47675053 + NM_000251 MSH2 0 . . . 2.08 0 22 4.8 No 41 1.32 Yes 0 0 No -21 0.65 No 42 48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108102614 + NM_000051 ATM 0 . . . 2.79 75.86 30 5.65 Yes 56 0.65 No 0 0 No -27 0.59 No 51 58.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68746159 + NM_133509 RAD51B 0 . . . 8.46 82.63 17 6.85 Yes 22 0.37 No 0 0 No -27 0.37 No 45 92.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29127114 - NM_001005735 CHEK2 0 . . . 4.86 88.68 33 6.13 Yes 52 1.32 Yes 0 0 No -23 0.4 No 49 94.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68499627 + NM_133509 RAD51B 0 . . . 4.72 87.76 12 5.29 No 27 1.39 Yes 0 0 No -32 0.63 No 50 92.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68783890 + NM_004360 CDH1 0 . . . 7.03 84.59 37 6.54 Yes 23 1.27 Yes 0 0 No -22 0.33 No 39 87.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190647619 + NM_000534 PMS1 0 . . . 8.01 78.67 18 4.85 No 65 -1.15 No 0 0 No -26 0.46 No 48 79.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68739723 + NM_133509 RAD51B 0 . . . 4.89 71.67 40 7.27 Yes 72 1.15 Yes 0 0 No -39 0.63 No 49 74.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37045079 + NM_000249 MLH1 0 . . . 6.24 82.31 31 6.78 Yes 3 0.46 No 0 0 No -30 0.59 No 55 50.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75491442 - NM_001040108 MLH3 0 . . . 3.79 87.78 20 4.43 No 3 0.21 No 0 0 No -20 0.9 Yes 44 92.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40991141 + NM_001164269 RAD51 0 . . . 1.07 73.99 20 5 No 68 0.03 No 0 0 No -22 0.52 No 46 34.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41272669 - NM_007294 BRCA1 0 . . . 2.01 61 18 8.06 Yes 20 1.18 Yes 0 0 No -18 0.44 No 38 86.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68709130 + NM_133509 RAD51B 0 . . . 0.39 0 28 5.82 Yes 18 1.87 Yes 0 0 No -27 0.8 Yes 40 92.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23644407 - NM_024675 PALB2 0 . . . 1.24 0 20 5.07 No 42 0.51 No 0 0 No -23 0.82 Yes 36 88.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59830875 - NM_032043 BRIP1 0 . . . 8.36 79.61 29 5.74 Yes 10 0.54 No 0 0 No -28 0.86 Yes 48 94.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94217782 - NM_005591 MRE11 0 . . . 0.94 64.88 19 4.75 No 28 0.77 No 0 0 No -30 0.44 No 37 50.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33436268 - NM_002878 RAD51D 0 . . . 0.16 81.55 27 5.65 Yes 47 -2.56 No 0 0 No -27 0.75 Yes 42 88.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131970440 + NM_005732 RAD50 0 . . . 5.87 82.31 50 6.88 Yes 2 0.44 No 0 0 No -23 0.56 No 41 61.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68843596 + NM_133509 RAD51B 0 . . . 0.95 63.2 19 4.82 No 46 -4.1 No 0 0 No -24 0.61 No 44 90.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68850691 + NM_004360 CDH1 0 . . . 7.14 83.47 14 4.9 No 3 0.82 Yes 0 0 No -22 0.85 Yes 43 49.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90968372 - NM_002485 NBN 0 . . . 0.13 65.71 34 5.74 Yes 68 2.58 Yes 0 0 No -29 0.23 No 48 91.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29122882 - NM_001005735 CHEK2 0 . . . 1.84 72.2 24 5.09 No 59 0.44 No 0 0 No -24 0.61 No 48 47.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68958010 + NM_133509 RAD51B 0 . . . 3.1 62.11 22 5.35 No 23 -1.79 No 0 0 No -25 0.59 No 39 66.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68586461 + NM_133509 RAD51B 0 . . . 2.92 61.75 12 4.41 No 28 0.4 No 0 0 No -45 0.72 Yes 29 69.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56789212 + NM_058216 RAD51C 0 . . . 7.48 87.49 27 6.71 Yes 12 0.4 No 0 0 No -26 0.9 Yes 46 92.31 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108180291 + NM_000051 ATM 0 . . . 3.43 67.37 18 7 Yes 17 0.26 No 0 0 No -30 0.44 No 46 51.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68728243 + NM_133509 RAD51B 0 . . . 4.49 68.78 27 9.43 Yes 33 0.02 No 0 0 No -26 0.8 Yes 25 78.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69081691 + NM_133509 RAD51B 0 . . . 3.27 68.95 77 7.2 Yes 55 1.48 Yes 0 0 No -27 0.88 Yes 42 87.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48032061 + NM_000179 MSH6 0 . . . 0.57 64.18 21 3.48 No 28 0.09 No 0 0 No -20 0.87 Yes 27 47.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69010319 + NM_133509 RAD51B 0 . . . 1.25 0 22 4.73 No 64 0.52 No 0 0 No -21 0.87 Yes 58 40.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47782826 + NM_000251 MSH2 0 . . . 8.63 91.25 66 8.19 Yes 6 0.99 Yes 0 0 No -23 0.38 No 34 42.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68811332 + NM_004360 CDH1 0 . . . 0.64 0 17 6.4 Yes 49 0.59 No 0 0 No -16 0.43 No 41 70.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68647631 + NM_133509 RAD51B 0 . . . 6.84 90.67 32 6.55 Yes 7 0.52 No 0 0 No -31 0.75 Yes 47 87.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47771853 + NM_000251 MSH2 0 . . . 2.56 74.87 17 5.83 Yes 33 1.88 Yes 0 0 No -23 0.58 No 25 82.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68679448 + NM_133509 RAD51B 0 . . . 0.66 78.02 40 7.11 Yes -4 0.31 No 0 0 No -39 0.68 Yes 51 47.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68740719 + NM_133509 RAD51B 0 . . . 0.21 60.47 41 6 Yes 34 0.68 No 0 0 No -34 0.6 No 43 20.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7570664 - NM_000546 TP53 0 . . . 4.55 81.56 30 5.99 Yes 12 0.58 No 0 0 No -29 0.75 Yes 46 54.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6018378 - NM_000535 PMS2 0 . . . 4.06 77.44 36 6.23 Yes 70 0.38 No 0 0 No -22 0.38 No 38 70.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59762388 - NM_032043 BRIP1 0 . . . 3.8 70.4 34 6.32 Yes 59 0.56 No 0 0 No -22 0.66 No 37 57.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69001867 + NM_133509 RAD51B 0 . . . 0.74 72.42 20 5.06 No 15 1.37 Yes 0 0 No -19 0.56 No 43 84.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45805852 - NM_001048171 MUTYH 0 . . . 4.12 75.71 25 4.54 No 60 1.19 Yes 18 0.87 Yes -24 0.73 Yes 40 41.85 No BPP: No, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 108220784 + NM_000051 ATM 0 . . . 0.3 65.46 12 4.99 No 2 0.48 No 0 0 No -24 0.71 Yes 56 37.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6027677 - NM_000535 PMS2 0 . . . 3.01 0 15 5.2 No 68 0.38 No 0 0 No -20 0.26 No 25 90.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68473107 + NM_133509 RAD51B 0 . . . 5.86 84.19 16 4.67 No 0 1.08 Yes 0 0 No -24 0.81 Yes 44 61.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68893698 + NM_133509 RAD51B 0 . . . 3.47 81.5 12 6.72 Yes 52 0.35 No 0 0 No -28 0.36 No 50 38.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89665144 + NM_000314 PTEN 0 . . . 5.36 85.86 26 5.12 No 67 -4.9 No 0 0 No -26 0.51 No 43 90.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41267708 - NM_007294 BRCA1 0 . . . 4.39 67.01 20 6.82 Yes 39 1.01 Yes 0 0 No -22 0.56 No 37 45.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89668177 + NM_000314 PTEN 0 . . . 1.16 74.38 18 4.57 No 57 1.12 Yes 0 0 No -17 0.89 Yes 39 61.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68988918 + NM_133509 RAD51B 0 . . . 1.37 0 21 5.61 Yes 59 1.14 Yes 0 0 No -28 0.46 No 42 58.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48027307 + NM_000179 MSH6 0 . . . 2.83 74.03 25 5.48 No 60 0.31 No 0 0 No -28 0.82 Yes 44 85.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68777450 + NM_004360 CDH1 0 . . . 3.6 85.02 44 6.49 Yes 4 1.05 Yes 0 0 No -26 0.55 No 54 67.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47641979 + NM_000251 MSH2 0 . . . 2.98 70.43 22 5.29 No 23 1.65 Yes 0 0 No -21 0.71 Yes 35 73.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190741658 + NM_000534 PMS1 0 . . . 4.19 71.71 16 4.69 No 75 0.65 No 0 0 No -36 0.49 No 40 68.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105208847 + NM_021930 RINT1 0 . . . 4.17 79.2 20 6.09 Yes -3 0.94 Yes 0 0 No -29 0.62 No 31 39.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190684227 + NM_000534 PMS1 0 . . . 3.23 77.05 27 5.1 No 8 1.15 Yes 0 0 No -27 0.73 Yes 50 55.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68981201 + NM_133509 RAD51B 0 . . . 1.18 64.93 51 6.68 Yes 0 1.17 Yes 0 0 No -50 0.84 Yes 34 81.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56785320 + NM_058216 RAD51C 0 . . . 5.53 83.9 44 3.89 No 3 0.45 No 0 0 No -30 0.39 No 45 73.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33426540 - NM_002878 RAD51D 0 . . . 6.81 87.02 14 3.87 No 21 0.12 No 0 0 No -13 0.68 Yes 53 68.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68309268 + NM_133509 RAD51B 0 . . . 3.31 85.02 26 5.29 No 68 1.87 Yes 0 0 No -25 0.93 Yes 54 68.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68700334 + NM_133509 RAD51B 0 . . . 7.82 77.3 37 5.97 Yes 15 0.49 No 0 0 No -31 0.69 Yes 43 61.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68386843 + NM_133509 RAD51B 0 . . . 2.28 62.35 14 4.62 No 57 0.37 No 0 0 No -49 0.78 Yes 40 87.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94199456 - NM_005591 MRE11 0 . . . 3.14 72.85 15 4.86 No 16 1.18 Yes 0 0 No -24 0.28 No 42 91.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68755405 + NM_133509 RAD51B 0 . . . 1.5 62.59 36 6.17 Yes 25 0.67 No 0 0 No -35 0.66 No 45 76.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190711285 + NM_000534 PMS1 0 . . . 1.21 68.39 14 5.56 Yes 34 -2.8 No 0 0 No -30 0.89 Yes 50 51.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68813289 + NM_133509 RAD51B 0 . . . 1.96 69.9 12 5.83 Yes 27 0.81 Yes 0 0 No -29 0.43 No 36 68.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68894699 + NM_133509 RAD51B 0 . . . 0.49 69.8 34 5.41 No 6 1.01 Yes 0 0 No -28 0.68 Yes 40 86.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68920369 + NM_133509 RAD51B 0 . . . 2.83 80.02 10 4 No 76 0.47 No 0 0 No -32 0.5 No 47 73.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104163722 - NM_001100119 XRCC3 0 . . . 5.47 76.63 19 4.09 No 67 1.22 Yes 0 0 No -21 0.57 No 49 79.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68533653 + NM_133509 RAD51B 0 . . . 2.18 84.61 13 4.8 No 0 0.44 No 0 0 No -16 0.54 No 49 84.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1225263 + NM_000455 STK11 0 . . . 4.06 74.81 16 5.2 No 23 -0.61 No 0 0 No -20 0.7 Yes 49 45.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41005383 + NM_001164269 RAD51 0 . . . 1.27 61.62 33 6.78 Yes 64 1.49 Yes 0 0 No -32 0.94 Yes 49 55.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215640634 - NM_000465 BARD1 0 . . . 2.66 77.92 26 5.25 No 56 0.33 No 0 0 No -25 0.59 No 40 80.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47694971 + NM_000251 MSH2 0 . . . 2.27 61.93 20 4.05 No 57 0.29 No 0 0 No -24 0.67 Yes 44 65.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94220955 - NM_005591 MRE11 0 . . . 6.4 80.81 21 5.64 Yes 1 1.14 Yes 0 0 No -20 0.68 Yes 45 57.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215616708 - NM_000465 BARD1 0 . . . 1.53 66.86 36 6.84 Yes 1 0.17 No 0 0 No -35 0.72 Yes 48 40.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75480216 - NM_001040108 MLH3 0 . . . 1.46 73.23 26 5.39 No 76 -4.74 No 0 0 No -25 0.75 Yes 53 58.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23615924 - NM_024675 PALB2 0 . . . 3.45 85.02 20 7.14 Yes 3 1.16 Yes 0 0 No -19 0.63 No 41 50.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56811745 + NM_058216 RAD51C 0 . . . 2.11 67.42 19 4.69 No 75 -6.08 No 0 0 No -18 0.52 No 52 33.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32974107 + NM_000059 BRCA2 0 . . . 1.94 77.08 20 6.48 Yes 7 1.01 Yes 0 0 No -29 0.87 Yes 51 85.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94211513 - NM_005591 MRE11 0 . . . 7.65 81.84 17 4.26 No 52 0.18 No 0 0 No -31 0.58 No 48 78.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84404177 - NM_139076 FAM175A 0 . . . 0.47 63.31 22 4.08 No 33 1.73 Yes 0 0 No -21 0.77 Yes 25 37.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68634600 + NM_133509 RAD51B 0 . . . 0.69 65.53 29 5.74 Yes 18 0.46 No 0 0 No -28 0.84 Yes 43 42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68396248 + NM_133509 RAD51B 0 . . . 3.66 92.68 21 5.1 No 24 0.3 No 0 0 No -20 0.85 Yes 45 59.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56811205 + NM_058216 RAD51C 0 . . . 2.93 0 32 5.56 Yes 40 1.13 Yes 0 0 No -31 0.39 No 18 44.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68434531 + NM_133509 RAD51B 0 . . . 7.53 79.93 25 4.93 No 60 -3.12 No 0 0 No -23 0.69 Yes 44 64.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68369440 + NM_133509 RAD51B 0 . . . 2.63 55.56 21 4.31 No 50 0.66 No 0 0 No -20 0.81 Yes 41 60.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68777083 + NM_004360 CDH1 0 . . . 0.92 0 12 5.54 No 23 1.87 Yes 0 0 No -28 0.42 No 35 97.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32952971 + NM_000059 BRCA2 0 . . . 4.2 72.35 37 4.84 No 67 -2.86 No 0 0 No -19 0.53 No 36 76.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6012975 - NM_000535 PMS2 0 . . . 1.4 76.8 43 6.72 Yes 22 0.44 No 0 0 No -27 0.47 No 45 91.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47663312 + NM_000251 MSH2 0 . . . 2.24 80.12 25 5.34 No 7 1.16 Yes 0 0 No -22 0.69 Yes 51 87.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68810153 + NM_004360 CDH1 0 . . . 3.19 70.85 17 6.08 Yes 23 1.16 Yes 0 0 No -16 0.67 Yes 40 68.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68862511 + NM_004360 CDH1 0 . . . 4.81 77.85 25 4.9 No 75 -5.17 No 0 0 No -24 0.83 Yes 46 51.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90996962 - NM_002485 NBN 0 . . . 8.33 85.02 31 5.57 Yes 76 1.63 Yes 30 0.51 Yes -30 0.62 No 38 83.14 Yes BPP: Yes, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr11 108195154 + NM_000051 ATM 0 . . . 2.21 0 25 4.88 No 60 0.5 No 0 0 No -24 0.43 No 48 66.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108136198 + NM_000051 ATM 0 . . . 4.28 73.03 13 4.8 No 17 0.62 No 0 0 No -27 0.51 No 41 68.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69014601 + NM_133509 RAD51B 0 . . . 4.25 75.91 36 7.14 Yes 58 1.5 Yes 0 0 No -35 0.89 Yes 47 44.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37060276 + NM_000249 MLH1 0 . . . 3.6 85.02 21 4.48 No 4 1.05 Yes 0 0 No -28 0.28 No 54 75.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32950778 + NM_000059 BRCA2 0 . . . 0.81 0 20 5.48 No 56 0.49 No 21 0.65 Yes -19 0.63 No 39 63.93 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 69116656 + NM_133509 RAD51B 0 . . . 2.15 0 26 4.21 No 11 0.21 No 0 0 No -30 0.74 Yes 47 40.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131957758 + NM_005732 RAD50 0 . . . 2.64 60.87 22 5.74 Yes 44 1.42 Yes 0 0 No -21 0.54 No 45 51.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90950292 - NM_002485 NBN 0 . . . 1.22 73.28 31 6.46 Yes 75 -5.22 No 0 0 No -30 0.76 Yes 50 95.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68564034 + NM_133509 RAD51B 0 . . . 0.44 0 21 6.21 Yes 21 0.86 Yes 0 0 No -20 0.47 No 37 73.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108226116 + NM_000051 ATM 0 . . . 1.07 70.11 29 7.35 Yes -2 0.56 No 0 0 No -28 0.9 Yes 20 62.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68825065 + NM_004360 CDH1 0 . . . 5.36 86.04 34 6.25 Yes 43 -2.71 No 0 0 No -30 0.42 No 50 43.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190664961 + NM_000534 PMS1 0 . . . 5.84 86.32 16 4.68 No 4 1.17 Yes 0 0 No -22 0.71 Yes 47 91.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68509819 + NM_133509 RAD51B 0 . . . 7.19 77.37 13 4.05 No 57 0.96 Yes 0 0 No -18 0.67 Yes 49 62.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47660123 + NM_000251 MSH2 0 . . . 0.5 75.16 14 5.29 No 0 0.07 No 0 0 No -22 0.42 No 58 44.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69115357 + NM_133509 RAD51B 0 . . . 0.22 67.42 31 4.42 No 8 0.5 No 0 0 No -27 0.33 No 49 78.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68422244 + NM_133509 RAD51B 0 . . . 3.86 72.57 22 5.29 No 23 2.25 Yes 0 0 No -24 0.55 No 35 96.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68756402 + NM_133509 RAD51B 0 . . . 3.66 84.56 19 4.17 No 58 -4.03 No 0 0 No -33 0.55 No 48 82.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108162541 + NM_000051 ATM 0 . . . 2.38 72.23 28 3.92 No 22 -2.27 No 0 0 No -27 0.6 No 43 83.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47689770 + NM_000251 MSH2 0 . . . 0.15 0 20 5.1 No 7 0.15 No 0 0 No -19 0.58 No 44 39.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68541555 + NM_133509 RAD51B 0 . . . 2.04 69.94 44 6.8 Yes 66 1 Yes 0 0 No -47 0.72 Yes 26 70.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69113920 + NM_133509 RAD51B 0 . . . 4.72 72.77 14 4.47 No 39 1.66 Yes 0 0 No -56 0.79 Yes 33 71.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68819495 + NM_004360 CDH1 0 . . . 1.51 80.65 30 5.74 Yes 3 0.81 Yes 0 0 No -29 0.88 Yes 51 59.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23633690 - NM_024675 PALB2 0 . . . 1.7 70.74 28 4.7 No -2 -2.22 No 0 0 No -20 0.76 Yes 44 50.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32890616 + NM_000059 BRCA2 0 . . . 1.47 69.41 55 6.17 Yes 73 0.53 No 0 0 No -27 0.25 No 43 35.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89673032 + NM_000314 PTEN 0 . . . 4.3 76.04 26 5.33 No 37 0.87 Yes 0 0 No -19 0.46 No 53 77.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68586204 + NM_133509 RAD51B 0 . . . 5.13 70.44 24 5.04 No 55 1.57 Yes 0 0 No -23 0.78 Yes 34 63.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68785187 + NM_133509 RAD51B 0 . . . 4.09 73.34 26 6.16 Yes 8 0.78 Yes 0 0 No -25 0.97 Yes 42 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68807864 + NM_133509 RAD51B 0 . . . 5.1 79.67 36 5.92 Yes 0 0.45 No 0 0 No -25 0.66 No 46 77.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69132469 + NM_133509 RAD51B 0 . . . 3.68 79.61 14 6.4 Yes 4 0.38 No 0 0 No -21 0.62 No 47 59.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47642645 + NM_000251 MSH2 0 . . . 5.77 92.4 27 5.37 No 45 1.39 Yes 0 0 No -30 0.55 No 13 79.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68473957 + NM_133509 RAD51B 0 . . . 4.55 68.7 37 6.49 Yes 65 0.74 No 0 0 No -31 0.43 No 30 82.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68746467 + NM_133509 RAD51B 0 . . . 5.88 74.52 23 4.97 No 68 0.49 No 0 0 No -22 0.82 Yes 48 27.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37045340 + NM_000249 MLH1 0 . . . 2.76 75.02 18 4.9 No 11 0.58 No 0 0 No -38 0.41 No 47 83.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68818742 + NM_004360 CDH1 0 . . . 0.14 0 14 4.47 No 37 1.9 Yes 0 0 No -34 0.51 No 21 90.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32918430 + NM_000059 BRCA2 0 . . . 4.47 66.09 19 5 No 59 -1.71 No 0 0 No -22 0.66 Yes 52 56.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94172747 - NM_005591 MRE11 0 . . . 3.26 80.39 33 5.46 No 74 -2.26 No 0 0 No -28 0.55 No 49 50.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47653331 + NM_000251 MSH2 0 . . . 3.89 84.17 17 5.39 No 38 0.87 Yes 0 0 No -25 0.5 No 19 79.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69003865 + NM_133509 RAD51B 0 . . . 3.02 62.93 15 4.58 No 64 0.42 No 0 0 No -57 0.66 No 60 45.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7582060 - NM_000546 TP53 0 . . . 0.72 70.84 13 4.36 No 32 0.39 No 0 0 No -27 0.45 No 51 29.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32967120 + NM_000059 BRCA2 0 . . . 6.53 76.61 68 8.54 Yes 4 1.02 Yes 0 0 No -42 0.37 No 54 42.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68558473 + NM_133509 RAD51B 0 . . . 4.71 75.73 25 5.2 No 49 -1.66 No 0 0 No -24 0.94 Yes 32 83.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47752386 + NM_000251 MSH2 0 . . . 4.37 75.79 42 6.49 Yes 5 0.74 No 0 0 No -22 0.67 Yes 53 76.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68829946 + NM_133509 RAD51B 0 . . . 8.42 84.01 31 5.4 No 43 0.3 No 0 0 No -30 0.73 Yes 43 75.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68472639 + NM_133509 RAD51B 0 . . . 5.4 83.22 44 4.91 No 66 -4.07 No 0 0 No -43 0.36 No 50 53.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68524387 + NM_133509 RAD51B 0 . . . 7.74 77.73 29 5.48 No 10 0.48 No 0 0 No -28 0.8 Yes 48 95.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56799053 + NM_058216 RAD51C 0 . . . 0.35 60.34 21 5.2 No 42 -2.65 No 0 0 No -56 0.61 No 56 30.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190719157 + NM_000534 PMS1 0 . . . 1.57 80.29 31 5.53 No -3 0.24 No 0 0 No -30 0.62 No 41 60.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68375606 + NM_133509 RAD51B 0 . . . 0.43 0 21 5.55 No 1 0.07 No 0 0 No -25 0.48 No 51 49.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41260082 - NM_007294 BRCA1 0 . . . 3.03 68.71 26 5.66 Yes 36 1.15 Yes 0 0 No -25 0.93 Yes 48 64.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75493556 - NM_001040108 MLH3 0 . . . 3.09 65.69 30 5.7 Yes 23 1.44 Yes 0 0 No -30 0.42 No 40 61.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68829634 + NM_004360 CDH1 0 . . . 6.24 82.31 23 4.64 No 59 1.18 Yes 0 0 No -23 0.56 No 40 94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23629285 - NM_024675 PALB2 0 . . . 6.35 95.56 25 6.38 Yes 40 1.51 Yes 0 0 No -24 0.96 Yes 18 94.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68785530 + NM_133509 RAD51B 0 . . . 0.03 61.71 22 4.76 No 50 -3.48 No 0 0 No -22 0.61 No 42 34.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68664707 + NM_133509 RAD51B 0 . . . 0.04 54.31 17 6.93 Yes 29 0.7 No 0 0 No -29 0.5 No 45 61.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94167397 - NM_005591 MRE11 0 . . . 6.28 75.16 20 5.57 Yes -3 0.3 No 0 0 No -19 0.68 Yes 47 65.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89702660 + NM_000314 PTEN 0 . . . 6.92 82.18 17 4.86 No 6 0.73 No 0 0 No -21 0.72 Yes 43 85.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68381728 + NM_133509 RAD51B 0 . . . 5.38 74.66 22 4.98 No -3 0.45 No 0 0 No -24 0.44 No 41 77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190728839 + NM_000534 PMS1 0 . . . 0.79 64.63 25 4.99 No 4 0.04 No 0 0 No -46 0.46 No 43 56.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68781250 + NM_133509 RAD51B 0 . . . 0.83 64.86 25 6.48 Yes 25 1.42 Yes 0 0 No -24 0.86 Yes 40 78.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89631859 + NM_000314 PTEN 0 . . . 8.05 84.69 25 5.92 Yes 16 0.8 Yes 0 0 No -24 0.85 Yes 48 55.81 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68813304 + NM_004360 CDH1 0 . . . 1.71 0 61 5.95 Yes 2 0.87 Yes 0 0 No -36 0.49 No 30 34.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47673963 + NM_000251 MSH2 0 . . . 3.37 68.95 32 6.8 Yes 59 1.49 Yes 0 0 No -31 0.88 Yes 42 91.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68579415 + NM_133509 RAD51B 0 . . . 0.05 0 24 5.1 No 74 0.68 No 0 0 No -23 0.91 Yes 43 66.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75482463 - NM_001040108 MLH3 0 . . . 2.83 0 14 5.1 No 74 0.64 No 0 0 No -19 0.58 No 49 73.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108138556 + NM_000051 ATM 0 . . . 3.3 77.77 17 4.58 No 59 -3.74 No 0 0 No -21 0.79 Yes 53 58.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29087122 - NM_001005735 CHEK2 0 . . . 4.39 76.99 28 5.74 Yes 55 1.83 Yes 0 0 No -21 0.6 No 45 82.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41239487 - NM_007294 BRCA1 0 . . . 3.01 80.36 31 6.79 Yes 32 1.59 Yes 0 0 No -34 0.77 Yes 21 46.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68563903 + NM_133509 RAD51B 0 . . . 3.44 64.76 28 5.34 No 35 -3.13 No 0 0 No -22 0.93 Yes 42 29.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108156569 + NM_000051 ATM 0 . . . 4.93 79.7 42 5.94 Yes 19 0.73 No 0 0 No -33 0.49 No 47 75.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68607150 + NM_133509 RAD51B 0 . . . 0.9 67.71 24 6.44 Yes 32 1.78 Yes 0 0 No -47 0.77 Yes 26 77.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33429801 - NM_002878 RAD51D 0 . . . 4.05 77.96 21 5.55 No 39 1.18 Yes 0 0 No -21 0.57 No 49 54.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104177504 - NM_001100119 XRCC3 0 . . . 0.26 76.32 22 4.8 No 51 0.55 No 0 0 No -21 0.77 Yes 13 29.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47804267 + NM_000251 MSH2 0 . . . 5.46 91.9 30 5.92 Yes 76 0.23 No 0 0 No -29 0.84 Yes 40 43.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68701844 + NM_133509 RAD51B 0 . . . 1.6 72.56 21 4.9 No 15 1.58 Yes 0 0 No -28 0.42 No 43 95.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105177139 + NM_021930 RINT1 0 . . . 3.83 75.16 21 5.66 Yes 53 1.22 Yes 0 0 No -20 0.77 Yes 53 63.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69060773 + NM_133509 RAD51B 0 . . . 0.58 65.7 17 4.66 No 54 1.03 Yes 0 0 No -26 0.62 No 58 67.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47661179 + NM_000251 MSH2 0 . . . 6.74 87.84 28 5.38 No -3 0.48 No 0 0 No -27 0.9 Yes 50 36.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69002245 + NM_133509 RAD51B 0 . . . 1.68 67.94 22 5.29 No 33 1.88 Yes 0 0 No -21 0.75 Yes 50 79.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59903184 - NM_032043 BRIP1 0 . . . 2.57 76.95 22 5.29 No 3 0.4 No 0 0 No -37 0.48 No 43 74.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68835694 + NM_004360 CDH1 0 . . . 8.35 80.92 37 7 Yes -4 0.6 No 0 0 No -36 0.86 Yes 36 49.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68586388 + NM_133509 RAD51B 0 . . . 3.51 69.24 34 7.4 Yes 10 0.79 Yes 0 0 No -33 0.76 Yes 48 91.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89669397 + NM_000314 PTEN 0 . . . 6.51 95.55 15 4.53 No 74 -1.85 No 0 0 No -36 0.69 Yes 42 72.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68778190 + NM_133509 RAD51B 0 . . . 5.09 71.22 67 7.34 Yes 58 0.96 Yes 0 0 No -23 0.6 No 37 82.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68547574 + NM_133509 RAD51B 0 . . . 2.55 70.59 22 5.77 Yes 56 -4.54 No 0 0 No -21 0.79 Yes 44 79.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94202632 - NM_005591 MRE11 0 . . . 6.16 81.4 35 7.29 Yes 52 1.24 Yes 0 0 No -30 0.49 No 45 67.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41238050 - NM_007294 BRCA1 0 . . . 1.64 65.25 29 5.85 Yes -3 0.24 No 0 0 No -28 0.77 Yes 39 47.88 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108144497 + NM_000051 ATM 0 . . . 4.77 73.68 30 6.98 Yes 60 0.95 Yes 0 0 No -26 0.67 Yes 46 68.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23624986 - NM_024675 PALB2 0 . . . 0.85 74.88 22 6.24 Yes 74 0.09 No 0 0 No -21 0.97 Yes 51 55.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56794176 + NM_058216 RAD51C 0 . . . 4.42 84.17 32 6.77 Yes 38 1.65 Yes 0 0 No -31 0.84 Yes 20 85.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68995768 + NM_133509 RAD51B 0 . . . 1.23 63.79 20 5.92 Yes 59 0.28 No 0 0 No -19 0.39 No 17 47.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68799697 + NM_004360 CDH1 0 . . . 4.12 84.5 18 4.9 No 39 0.9 Yes 0 0 No -22 0.49 No 48 84.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68780677 + NM_133509 RAD51B 0 . . . 4.96 72.85 53 7.68 Yes -2 0.52 No 0 0 No -35 0.52 No 42 76.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7576038 - NM_000546 TP53 0 . . . 0.12 67.8 25 6.08 Yes 69 0.29 No 0 0 No -25 0.44 No 38 64.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68775294 + NM_004360 CDH1 0 . . . 6.14 83.62 21 5.11 No 3 1.99 Yes 0 0 No -19 0.35 No 55 60.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29126864 - NM_001005735 CHEK2 0 . . . 6.45 79.42 15 4.47 No 9 0.06 No 0 0 No -45 0.4 No 45 74.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68489929 + NM_133509 RAD51B 0 . . . 2.8 0 13 3.86 No 54 0.53 No 0 0 No -49 0.28 No 51 62.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56772193 + NM_058216 RAD51C 0 . . . 6.29 77.29 44 6.67 Yes 63 0.28 No 0 0 No -31 0.78 Yes 34 68.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47747519 + NM_000251 MSH2 0 . . . 6.63 79.86 17 3.95 No 13 0.25 No 0 0 No -23 0.35 No 50 50.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68920911 + NM_133509 RAD51B 0 . . . 3.13 74.18 17 4.66 No 75 0.2 No 0 0 No -47 0.72 Yes 45 78.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37090837 + NM_000249 MLH1 0 . . . 2.17 0 26 5.66 Yes 28 -3.05 No 0 0 No -25 0.82 Yes 49 35.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7571835 - NM_000546 TP53 0 . . . 1.77 70.13 15 5.7 Yes 10 0.03 No 0 0 No -45 0.37 No 48 59.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68930439 + NM_133509 RAD51B 0 . . . 4.73 84.71 20 7.51 Yes 70 -3.87 No 0 0 No -23 0.64 No 50 62.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59916446 - NM_032043 BRIP1 0 . . . 3.68 77.28 63 7.27 Yes 23 0.43 No 0 0 No -23 0.69 Yes 39 70.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68787529 + NM_133509 RAD51B 0 . . . 1.31 58.43 26 4.95 No 0 0.49 No 0 0 No -22 0.48 No 58 68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6029560 - NM_000535 PMS2 0 . . . 4.75 79.47 14 5 No 39 0.23 No 0 0 No -21 0.53 No 16 46.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68535831 + NM_133509 RAD51B 0 . . . 0.18 0 23 5.83 Yes 52 0.79 Yes 0 0 No -26 0.61 No 28 55.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68785052 + NM_004360 CDH1 0 . . . 1.66 71.28 31 5.48 No 59 0.63 No 0 0 No -23 0.57 No 41 44.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56779872 + NM_058216 RAD51C 0 . . . 0.5 63.83 10 3.71 No 75 -4.99 No 0 0 No -33 0.57 No 46 22.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68677363 + NM_133509 RAD51B 0 . . . 0.56 57.6 25 4.74 No 35 1.37 Yes 0 0 No -24 0.89 Yes 58 30.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47796355 + NM_000251 MSH2 0 . . . 3.47 80.79 30 5.39 No 56 0.25 No 0 0 No -29 0.58 No 47 44.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59886309 - NM_032043 BRIP1 0 . . . 2.82 67.69 19 4.61 No 68 -3.42 No 0 0 No -30 0.78 Yes 52 39.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131902195 + NM_005732 RAD50 0 . . . 2.7 72.21 27 5.57 Yes 28 1.72 Yes 0 0 No -26 0.91 Yes 48 85.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69050351 + NM_133509 RAD51B 0 . . . 3.3 71.81 42 6.45 Yes 61 -2.75 No 0 0 No -28 0.5 No 51 80.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68850039 + NM_004360 CDH1 0 . . . 0.66 86.88 21 4.8 No 76 1.25 Yes 0 0 No -20 0.92 Yes 50 57.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90998430 - NM_002485 NBN 0 . . . 1.24 0 27 7.5 Yes 31 0.7 No 0 0 No -26 0.93 Yes 49 76.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23642022 - NM_024675 PALB2 0 . . . 1.16 69.47 29 6.26 Yes 55 1.34 Yes 0 0 No -28 0.82 Yes 55 56.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41258862 - NM_007294 BRCA1 0 . . . 5.47 81.33 62 5.63 Yes 11 1.29 Yes 0 0 No -26 0.52 No 47 77.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48011924 + NM_000179 MSH6 0 . . . 6.17 83.85 55 7.67 Yes 72 0.76 No 0 0 No -44 0.37 No 50 63.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68477865 + NM_133509 RAD51B 0 . . . 4.06 69.55 21 5.2 No 5 1.17 Yes 0 0 No -49 0.38 No 33 40.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68881939 + NM_133509 RAD51B 0 . . . 5.57 78.44 18 3.82 No -4 0.87 Yes 0 0 No -16 0.75 Yes 40 49.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68347933 + NM_133509 RAD51B 0 . . . 3.96 78.74 25 4.94 No 8 0.04 No 0 0 No -24 0.35 No 43 42.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68728449 + NM_133509 RAD51B 0 . . . 5.65 74.45 24 4.3 No 60 0.82 Yes 0 0 No -23 0.72 Yes 49 50.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190648929 + NM_000534 PMS1 0 . . . 0.83 0 30 5.57 Yes 68 0.82 Yes 0 0 No -29 0.82 Yes 32 66.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59893136 - NM_032043 BRIP1 0 . . . 1.89 78.35 34 5.78 Yes 4 0.82 Yes 0 0 No -27 0.44 No 45 62.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68891245 + NM_133509 RAD51B 0 . . . 6.94 0 19 5.23 No 13 1.09 Yes 0 0 No -22 0.68 Yes 45 44.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68518739 + NM_133509 RAD51B 0 . . . 3.21 70.86 16 4.38 No 22 -3.31 No 0 0 No -31 0.93 Yes 47 73.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108194021 + NM_000051 ATM 0 . . . 0.34 78.57 20 4.69 No -4 0.16 No 0 0 No -19 0.76 Yes 49 52.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68330544 + NM_133509 RAD51B 0 . . . 1.59 68.77 15 4.58 No 24 0.39 No 0 0 No -25 0.45 No 42 47.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68628063 + NM_133509 RAD51B 0 . . . 1.25 69.71 23 5 No 30 0.01 No 0 0 No -22 0.63 No 46 70.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108116474 + NM_000051 ATM 0 . . . 0.88 64.71 38 5.8 Yes 36 0.46 No 0 0 No -34 0.4 No 37 52.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69103058 + NM_133509 RAD51B 0 . . . 6.29 71.87 42 6.52 Yes 67 -5.03 No 0 0 No -27 0.54 No 47 96.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47713423 + NM_000251 MSH2 0 . . . 4.41 75.45 16 4.52 No 72 -2.96 No 0 0 No -20 0.57 No 46 79.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190664581 + NM_000534 PMS1 0 . . . 2.46 0 23 5 No 30 -2.25 No 0 0 No -22 0.69 Yes 45 42.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68844405 + NM_004360 CDH1 0 . . . 4.45 72.02 45 8.1 Yes 51 1.28 Yes 0 0 No -45 0.67 Yes 35 59.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48022699 + NM_000179 MSH6 0 . . . 6.14 88.68 15 4.58 No 9 1.13 Yes 0 0 No -33 0.29 No 49 94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94213185 - NM_005591 MRE11 0 . . . 5.18 78.05 22 4.27 No 4 1.19 Yes 0 0 No -24 0.57 No 50 76.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215671900 - NM_000465 BARD1 0 . . . 4.91 75.64 21 5.1 No 3 0.97 Yes 0 0 No -20 0.48 No 12 43.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68495995 + NM_133509 RAD51B 0 . . . 4.4 74.55 20 4.69 No 56 0.26 No 0 0 No -19 0.88 Yes 17 62.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47732160 + NM_000251 MSH2 0 . . . 0.57 60.4 16 4.69 No 48 1.39 Yes 0 0 No -25 0.61 No 48 57.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190701632 + NM_000534 PMS1 0 . . . 2.47 81.06 28 5.25 No 24 0.68 No 0 0 No -27 0.43 No 29 61.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68952422 + NM_133509 RAD51B 0 . . . 7.41 81.24 16 4.19 No 19 1.93 Yes 0 0 No -27 0.61 No 39 84.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69024095 + NM_133509 RAD51B 0 . . . 0.73 66.93 45 5.09 No 16 1.19 Yes 0 0 No -35 0.78 Yes 42 70.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59789911 - NM_032043 BRIP1 0 . . . 1.24 0 18 4.21 No 53 0.64 No 0 0 No -18 0.51 No 36 51.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190690657 + NM_000534 PMS1 0 . . . 3.83 76.8 17 5.52 No 31 -2.84 No 0 0 No -27 0.59 No 45 48.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68593438 + NM_133509 RAD51B 0 . . . 4.63 75.44 16 4.58 No 48 0.08 No 0 0 No -21 0.58 No 46 62.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108142541 + NM_000051 ATM 0 . . . 3.98 66.38 30 5.43 No 54 -4.96 No 0 0 No -24 0.65 No 43 92.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68348340 + NM_133509 RAD51B 0 . . . 11.06 90.15 28 6.05 Yes 39 0.5 No 0 0 No -27 0.64 No 47 88.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59843436 - NM_032043 BRIP1 0 . . . 7.28 86.59 20 4.84 No 7 1.32 Yes 0 0 No -25 0.86 Yes 46 85.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59898647 - NM_032043 BRIP1 0 . . . 6.52 75.12 17 5.37 No 23 -1.43 No 0 0 No -29 0.62 No 49 39.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59914621 - NM_032043 BRIP1 0 . . . 5.61 72.58 23 4.68 No 9 0.41 No 0 0 No -22 0.78 Yes 40 83.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108182119 + NM_000051 ATM 0 . . . 0.65 67.74 37 6.38 Yes -1 1.13 Yes 0 0 No -36 0.52 No 51 55.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108115082 + NM_000051 ATM 0 . . . 5.32 83.99 29 5.61 Yes 4 1.71 Yes 0 0 No -28 0.72 Yes 54 51.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47769732 + NM_000251 MSH2 0 . . . 1.24 0 22 7.06 Yes 62 -4.42 No 0 0 No -24 0.55 No 34 60.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75517709 - NM_001040108 MLH3 0 . . . 1.21 63.28 18 4.7 No 22 0.86 Yes 0 0 No -39 0.51 No 20 87.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75512638 - NM_001040108 MLH3 0 . . . 6.93 81.31 19 4.36 No 11 0.81 Yes 0 0 No -16 0.73 Yes 47 81.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68901650 + NM_133509 RAD51B 0 . . . 5.33 71.76 38 7.01 Yes 0 0.05 No 0 0 No -24 0.5 No 42 64.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47788727 + NM_000251 MSH2 0 . . . 9.67 82.46 26 5.87 Yes 76 -2.96 No 0 0 No -25 0.61 No 32 61.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68787563 + NM_133509 RAD51B 0 . . . 0.23 0 22 5.23 No 57 -4.48 No 0 0 No -25 0.64 No 53 36.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47640448 + NM_000251 MSH2 0 . . . 7.92 75.32 26 5.2 No 14 0.97 Yes 0 0 No -25 0.39 No 44 88.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90969443 - NM_002485 NBN 0 . . . 2.2 59.56 32 5.47 No 63 -3.39 No 0 0 No -31 0.64 No 43 89.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68448988 + NM_133509 RAD51B 0 . . . 1.77 0 14 4.94 No 51 -2.81 No 0 0 No -50 0.63 No 52 57.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41245087 - NM_007294 BRCA1 0 . . . 4.43 74.08 50 7.06 Yes 51 -3.9 No 0 0 No -37 0.5 No 51 83.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68665909 + NM_133509 RAD51B 0 . . . 4.22 86.74 31 5.74 Yes 41 2.06 Yes 0 0 No -30 0.66 No 35 74.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131967123 + NM_005732 RAD50 0 . . . 7.25 76.01 19 5 No 8 1.47 Yes 0 0 No -18 0.86 Yes 50 81.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215653461 - NM_000465 BARD1 0 . . . 2.24 70.45 36 4.72 No 39 0.74 No 0 0 No -35 0.67 Yes 43 32.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215651236 - NM_000465 BARD1 0 . . . 2.34 77.41 19 5.29 No 69 1.13 Yes 0 0 No -31 0.7 Yes 50 48.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131949470 + NM_005732 RAD50 0 . . . 3.6 85.02 22 4.99 No 4 1.2 Yes 0 0 No -21 0.52 No 54 79.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47638480 + NM_000251 MSH2 0 . . . 6.24 82.31 17 4.79 No 3 0.46 No 0 0 No -39 0.62 No 55 58.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47660986 + NM_000251 MSH2 0 . . . 5.66 85.17 16 4.69 No -3 0.45 No 0 0 No -19 0.74 Yes 50 36.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131952619 + NM_005732 RAD50 0 . . . 1.5 74.97 18 4.9 No 61 -2.5 No 0 0 No -54 0.8 Yes 47 70.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69099611 + NM_133509 RAD51B 0 . . . 1.8 80.65 21 4.9 No 3 0.8 Yes 0 0 No -21 0.66 No 50 85.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32965277 + NM_000059 BRCA2 0 . . . 7.25 85.43 21 5.02 No 10 1.59 Yes 0 0 No -20 0.52 No 48 51.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56811264 + NM_058216 RAD51C 0 . . . 3.24 79.69 14 4.45 No 7 1.02 Yes 0 0 No -24 0.35 No 51 85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94200568 - NM_005591 MRE11 0 . . . 7.36 85.88 33 6.34 Yes 33 0.8 Yes 0 0 No -22 0.6 No 50 87.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41259038 - NM_007294 BRCA1 0 . . . 3.73 80.92 25 5.37 No 13 -2.22 No 0 0 No -22 0.82 Yes 42 78.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190724091 + NM_000534 PMS1 0 . . . 0.26 0 26 8.15 Yes 6 0.31 No 0 0 No -25 0.49 No 48 55.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68846959 + NM_004360 CDH1 0 . . . 7.55 79.82 18 5.15 No 5 0.52 No 0 0 No -57 0.27 No 53 76.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94165805 - NM_005591 MRE11 0 . . . 3.25 80.12 32 5.74 Yes 8 1.2 Yes 0 0 No -31 0.33 No 50 88.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59931984 - NM_032043 BRIP1 0 . . . 3.77 69.48 24 5.08 No 16 0.97 Yes 0 0 No -23 0.9 Yes 42 91.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89719470 + NM_000314 PTEN 0 . . . 0.79 62.35 41 7.52 Yes 34 1.63 Yes 0 0 No -24 0.58 No 24 72.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68722779 + NM_133509 RAD51B 0 . . . 2.89 83.33 25 5.29 No 50 1.08 Yes 0 0 No -24 0.79 Yes 47 25.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75497830 - NM_001040108 MLH3 0 . . . 2.86 68.23 20 4.9 No 22 0.93 Yes 0 0 No -25 0.79 Yes 36 54.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131917829 + NM_005732 RAD50 0 . . . 1.71 66.07 16 5.88 Yes 66 1.05 Yes 0 0 No -32 0.34 No 46 65.89 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105209992 + NM_021930 RINT1 0 . . . 3.47 0 23 4.1 No 54 -2.68 No 0 0 No -21 0.4 No 32 55.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108222529 + NM_000051 ATM 0 . . . 1.52 77.97 51 6.35 Yes 34 0.06 No 0 0 No -19 0.53 No 38 80.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152365650 - NM_005431 XRCC2 0 . . . 0.12 66.19 13 5.48 No 30 1.37 Yes 0 0 No -23 0.76 Yes 46 57.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69019682 + NM_133509 RAD51B 0 . . . 2.06 72.68 23 3.67 No 38 0.94 Yes 0 0 No -18 0.33 No 41 68.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89720422 + NM_000314 PTEN 0 . . . 2.45 67.55 36 6 Yes 47 -2.02 No 0 0 No -35 0.55 No 42 59.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47634705 + NM_000251 MSH2 0 . . . 0.95 67.25 10 3.98 No 5 0.9 Yes 0 0 No -28 0.58 No 52 52.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215618482 - NM_000465 BARD1 0 . . . 2.42 69 12 3.13 No -3 0.68 No 0 0 No -29 0.83 Yes 48 54.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47639938 + NM_000251 MSH2 0 . . . 7.11 88.68 27 5.2 No 9 1.42 Yes 0 0 No -26 0.59 No 49 96.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29118175 - NM_001005735 CHEK2 0 . . . 6 72.32 28 5.7 Yes 34 -1.68 No 0 0 No -32 0.82 Yes 44 93.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68727229 + NM_133509 RAD51B 0 . . . 3.23 73.25 73 8.34 Yes 69 -6 No 0 0 No -24 0.73 Yes 44 48.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47793362 + NM_000251 MSH2 0 . . . 0.98 67.51 28 5.38 No 59 -0.23 No 0 0 No -44 0.67 Yes 35 56.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68461090 + NM_133509 RAD51B 0 . . . 3.47 83.02 16 7.07 Yes 73 -3.99 No 0 0 No -33 0.43 No 51 47.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68617269 + NM_133509 RAD51B 0 . . . 1.35 67.63 17 4.58 No 59 0.44 No 0 0 No -52 0.37 No 30 86.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68738817 + NM_133509 RAD51B 0 . . . 6.24 82.31 35 5.85 Yes 2 1.07 Yes 0 0 No -31 0.53 No 48 71.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89660257 + NM_000314 PTEN 0 . . . 7.09 81.54 24 5.48 No 7 0.51 No 0 0 No -23 0.78 Yes 51 57.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108195109 + NM_000051 ATM 0 . . . 2.11 62.69 22 6.49 Yes 15 0.47 No 0 0 No -27 0.69 Yes 43 52.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41255481 - NM_007294 BRCA1 0 . . . 2.3 84.41 25 5.42 No 67 -2.75 No 0 0 No -24 0.79 Yes 40 56.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89686609 + NM_000314 PTEN 0 . . . 1.19 67.85 21 4.35 No 45 -4.26 No 0 0 No -26 0.58 No 16 78.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47708903 + NM_000251 MSH2 0 . . . 3.68 70.85 32 4.95 No 21 1.72 Yes 0 0 No -34 0.28 No 42 84.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47743157 + NM_000251 MSH2 0 . . . 1.59 80.36 18 3.96 No 4 1.52 Yes 0 0 No -23 0.44 No 46 79.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68831895 + NM_133509 RAD51B 0 . . . 3.84 62.77 21 6.32 Yes 22 0.06 No 0 0 No -20 0.91 Yes 51 42.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68770459 + NM_004360 CDH1 0 . . . 2.1 76.63 20 7.06 Yes 67 -4.78 No 0 0 No -19 0.59 No 43 52.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47799413 + NM_000251 MSH2 0 . . . 3.11 61.82 25 5.54 No 69 -2.13 No 0 0 No -25 0.72 Yes 43 54.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47711947 + NM_000251 MSH2 0 . . . 4.2 76.91 29 5.57 Yes 35 -3.67 No 0 0 No -26 0.56 No 49 25.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108106896 + NM_000051 ATM 0 . . . 1.26 75.95 27 5.2 No 68 -5.61 No 0 0 No -26 0.64 No 48 70.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108192185 + NM_000051 ATM 0 . . . 1.26 0 16 6.17 Yes 10 0.86 Yes 0 0 No -15 0.45 No 39 75.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94222096 - NM_005591 MRE11 0 . . . 1.09 0 11 5.29 No 43 0.04 No 0 0 No -21 0.31 No 45 68.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68705596 + NM_133509 RAD51B 0 . . . 5.03 78.28 25 5 No 18 0.88 Yes 0 0 No -24 0.84 Yes 40 76.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108179712 + NM_000051 ATM 0 . . . 1.98 62.46 19 4.33 No 20 0.36 No 0 0 No -18 0.42 No 46 79.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108190770 + NM_000051 ATM 0 . . . 0.95 66.87 50 8.23 Yes 20 0.19 No 0 0 No -32 0.54 No 38 40.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68425042 + NM_133509 RAD51B 0 . . . 2.47 75.55 24 5.2 No 56 0.8 Yes 0 0 No -23 0.88 Yes 41 86.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41203590 - NM_007294 BRCA1 0 . . . 0.98 60.64 31 4.91 No 0 0.09 No 0 0 No -26 0.36 No 39 70.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59829786 - NM_032043 BRIP1 0 . . . 4.95 77.26 19 4.98 No 53 0.01 No 0 0 No -18 0.52 No 50 93.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69112996 + NM_133509 RAD51B 0 . . . 2.58 82.78 19 4.69 No 49 1.08 Yes 0 0 No -18 0.55 No 36 31.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94178932 - NM_005591 MRE11 0 . . . 3.12 64.73 17 6.07 Yes 12 0.14 No 0 0 No -16 0.56 No 46 61.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215655046 - NM_000465 BARD1 0 . . . 1.73 73.33 18 5.4 No 2 1.69 Yes 0 0 No -24 0.78 Yes 46 79.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108207509 + NM_000051 ATM 0 . . . 8.18 79.37 32 6 Yes 1 0.94 Yes 0 0 No -31 0.86 Yes 38 64.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59827994 - NM_032043 BRIP1 0 . . . 0.17 0 13 4.86 No 41 0.39 No 0 0 No -26 0.52 No 32 56.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68836638 + NM_133509 RAD51B 0 . . . 4.53 92.62 27 5.26 No 45 0.84 Yes 0 0 No -26 0.66 No 50 25.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68731823 + NM_133509 RAD51B 0 . . . 5.97 78.36 13 4.22 No 1 0.6 No 0 0 No -46 0.39 No 48 56.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89628855 + NM_000314 PTEN 0 . . . 0.71 74.51 30 6.78 Yes 3 0.4 No 0 0 No -28 0.4 No 43 70.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47725394 + NM_000251 MSH2 0 . . . 0.27 65.89 11 5.2 No 15 2.4 Yes 0 0 No -28 0.81 Yes 43 67.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108156759 + NM_000051 ATM 0 . . . 2.27 82.79 29 6.48 Yes 55 0.48 No 0 0 No -28 0.79 Yes 44 49.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69117150 + NM_133509 RAD51B 0 . . . 3.33 73.85 29 5.92 Yes 28 0.67 No 0 0 No -23 0.42 No 30 75.78 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131931784 + NM_005732 RAD50 0 . . . 4.95 81.85 34 5.96 Yes 64 0.64 No 0 0 No -33 0.88 Yes 49 94.92 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69047089 + NM_133509 RAD51B 0 . . . 3.24 69.75 14 3.94 No 38 -1.81 No 0 0 No -25 0.88 Yes 47 29.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108110612 + NM_000051 ATM 0 . . . 3.01 66.4 23 6.65 Yes 0 0.68 No 0 0 No -22 0.34 No 31 80.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23637041 - NM_024675 PALB2 0 . . . 4.41 86.01 33 5.6 Yes 10 1.01 Yes 0 0 No -25 0.55 No 48 95.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215593544 - NM_000465 BARD1 0 . . . 0.87 73.15 21 4.47 No 69 -4.83 No 0 0 No -20 0.48 No 47 51.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68626717 + NM_133509 RAD51B 0 . . . 10 83.25 18 4.69 No 68 0.15 No 0 0 No -20 0.51 No 38 47.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190722707 + NM_000534 PMS1 0 . . . 1.43 0 16 6.86 Yes 47 -4.58 No 0 0 No -26 0.45 No 44 28.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68551222 + NM_133509 RAD51B 0 . . . 1.04 0 33 5.41 No 51 1.79 Yes 0 0 No -35 0.54 No 49 38.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94214282 - NM_005591 MRE11 0 . . . 0.42 74.73 28 6.71 Yes 33 1.16 Yes 0 0 No -27 0.86 Yes 18 66.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108209725 + NM_000051 ATM 0 . . . 2.84 61.59 26 5.09 No 49 0.19 No 0 0 No -25 0.7 Yes 38 38.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108130189 + NM_000051 ATM 0 . . . 0.9 0 17 4.58 No 60 -4.01 No 0 0 No -25 0.3 No 38 34.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94185550 - NM_005591 MRE11 0 . . . 3.85 71.63 19 4.8 No 36 1.22 Yes 0 0 No -18 0.45 No 46 59.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69149897 + NM_133509 RAD51B 0 . . . 1.46 80.12 44 6.63 Yes 63 -4.76 No 0 0 No -32 0.46 No 58 28.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1227018 + NM_000455 STK11 0 . . . 0.33 71.17 33 6.85 Yes 1 -0.43 No 0 0 No -32 0.84 Yes 57 39.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41019913 + NM_001164269 RAD51 0 . . . 3.09 64.67 14 3.39 No 37 0.56 No 0 0 No -31 0.52 No 21 96.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89658072 + NM_000314 PTEN 0 . . . 1.75 67.03 26 5 No 27 -3.53 No 0 0 No -29 0.23 No 46 61.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32900515 + NM_000059 BRCA2 0 . . . 4.18 63.42 9 5.1 No 10 0.26 No 0 0 No -24 0.75 Yes 48 62.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108189130 + NM_000051 ATM 0 . . . 5.11 81.12 10 6.08 Yes 2 0.3 No 0 0 No -26 0.49 No 46 43.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68409744 + NM_133509 RAD51B 0 . . . 1.64 71.03 22 4.87 No 3 0.18 No 0 0 No -21 0.66 Yes 51 56.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6034435 - NM_000535 PMS2 0 . . . 0.98 86.55 28 6.16 Yes -4 0.13 No 0 0 No -27 0.92 Yes 47 90.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89690599 + NM_000314 PTEN 0 . . . 5.11 77.58 16 5.39 No 12 1 Yes 0 0 No -27 0.74 Yes 46 82.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32960955 + NM_000059 BRCA2 0 . . . 2.57 0 25 5 No 48 -1.04 No 0 0 No -24 0.91 Yes 49 62.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190697463 + NM_000534 PMS1 0 . . . 6.94 88.91 20 6.77 Yes 5 1 Yes 0 0 No -29 0.62 No 45 52.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105186352 + NM_021930 RINT1 0 . . . 2.1 66.46 15 5.1 No 58 1.44 Yes 0 0 No -19 0.42 No 42 89.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41221704 - NM_007294 BRCA1 0 . . . 4.14 68.57 16 5.43 No 53 0.8 Yes 0 0 No -27 0.4 No 50 57.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32915395 + NM_000059 BRCA2 0 . . . 1.14 79.82 20 7.14 Yes 47 0.75 No 0 0 No -19 0.68 Yes 46 54.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190721655 + NM_000534 PMS1 0 . . . 2.97 76.09 23 4.16 No 29 0.52 No 0 0 No -22 0.69 Yes 45 62.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105201945 + NM_021930 RINT1 0 . . . 5.71 86.79 31 6.08 Yes 15 0.59 No 0 0 No -30 0.43 No 42 48.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68397468 + NM_133509 RAD51B 0 . . . 0.93 65.17 21 4.28 No 49 0.32 No 0 0 No -27 0.53 No 49 61.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215597257 - NM_000465 BARD1 0 . . . 0.31 61.05 33 5.35 No 56 1.39 Yes 0 0 No -25 0.94 Yes 42 52.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190671597 + NM_000534 PMS1 0 . . . 2.84 56.62 28 7.28 Yes 30 0.45 No 0 0 No -25 0.51 No 50 78.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68978658 + NM_133509 RAD51B 0 . . . 0.8 0 35 6.39 Yes 52 1.43 Yes 0 0 No -34 0.8 Yes 30 88.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7575803 - NM_000546 TP53 0 . . . 5.22 81.3 23 5.83 Yes 28 0.99 Yes 0 0 No -22 0.85 Yes 30 42.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59792534 - NM_032043 BRIP1 0 . . . 2.67 82.03 29 4.97 No 2 1.45 Yes 0 0 No -29 0.56 No 20 72.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68756785 + NM_133509 RAD51B 0 . . . 5.25 73.95 44 6.49 Yes 40 2.06 Yes 0 0 No -37 0.77 Yes 53 26.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32922543 + NM_000059 BRCA2 0 . . . 7.55 75.8 18 4.77 No 22 0.42 No 0 0 No -20 0.68 Yes 46 62.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89728227 + NM_000314 PTEN 0 . . . 0.36 0 27 5.1 No 72 -6.39 No 0 0 No -45 0.41 No 53 57.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68885087 + NM_133509 RAD51B 0 . . . 8.16 88.46 29 6.73 Yes 4 1.15 Yes 0 0 No -28 0.92 Yes 47 65.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6041483 - NM_000535 PMS2 0 . . . 3.62 74.63 13 5.64 Yes 73 0.57 No 0 0 No -26 0.51 No 52 38.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47778147 + NM_000251 MSH2 0 . . . 4.8 78.81 29 5.47 No 24 0.31 No 0 0 No -28 0.59 No 34 79.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68373628 + NM_133509 RAD51B 0 . . . 3.37 68.95 16 4.69 No 16 1.02 Yes 0 0 No -21 0.61 No 42 90.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23652225 - NM_024675 PALB2 0 . . . 0.99 79.56 25 5.26 No 23 0.17 No 0 0 No -22 0.71 Yes 49 50.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94210631 - NM_005591 MRE11 0 . . . 8.31 80.57 24 6.06 Yes 46 0.89 Yes 0 0 No -23 0.58 No 42 73.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68828441 + NM_004360 CDH1 0 . . . 5.71 73.46 18 4.47 No 56 1.74 Yes 0 0 No -17 0.53 No 42 30.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47749128 + NM_000251 MSH2 0 . . . 4.36 69.51 12 5.57 Yes 20 0.45 No 0 0 No -53 0.29 No 38 74.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68923980 + NM_133509 RAD51B 0 . . . 1.09 71.53 20 4.8 No 65 -4.86 No 0 0 No -19 0.79 Yes 43 75.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68734585 + NM_133509 RAD51B 0 . . . 1.56 73.35 22 4.69 No 30 0.56 No 0 0 No -19 0.73 Yes 41 58.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56792895 + NM_058216 RAD51C 0 . . . 0.62 62.44 27 5.37 No 29 0.56 No 0 0 No -25 0.45 No 22 64.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68824210 + NM_133509 RAD51B 0 . . . 3.33 63.44 13 4.36 No 29 1.39 Yes 0 0 No -28 0.89 Yes 46 53.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131908492 + NM_005732 RAD50 0 . . . 5.98 83.74 36 6.48 Yes 74 -2.73 No 0 0 No -35 0.94 Yes 48 51.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7568660 - NM_000546 TP53 0 . . . 4.32 84 14 5.1 No 2 0.68 No 0 0 No -27 0.54 No 44 32.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45804744 - NM_001048171 MUTYH 0 . . . 7 83.07 17 4.69 No 10 1.11 Yes 0 0 No -20 0.63 No 43 76.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108212160 + NM_000051 ATM 0 . . . 5.22 83.4 25 5.19 No 42 0.43 No 0 0 No -24 0.95 Yes 46 74.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23616318 - NM_024675 PALB2 0 . . . 6.14 88.68 21 4.69 No 76 1.04 Yes 0 0 No -21 0.23 No 49 86.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68414774 + NM_133509 RAD51B 0 . . . 1.45 84.97 27 4.76 No 59 -3.94 No 0 0 No -26 0.92 Yes 51 52.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94220603 - NM_005591 MRE11 0 . . . 1.64 0 16 5.83 Yes 24 1.35 Yes 0 0 No -15 0.23 No 50 75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152365132 - NM_005431 XRCC2 0 . . . 0.68 69.69 29 5.54 No 56 -1.58 No 0 0 No -28 0.79 Yes 40 50.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69023635 + NM_133509 RAD51B 0 . . . 0.72 62.8 20 4.52 No 13 -0.72 No 0 0 No -28 0.92 Yes 13 41.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68794554 + NM_004360 CDH1 0 . . . 6.48 84.24 18 5.55 No 11 0.2 No 0 0 No -27 0.8 Yes 47 84.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47728441 + NM_000251 MSH2 0 . . . 1.89 75.18 22 7.28 Yes 33 1.22 Yes 0 0 No -21 0.87 Yes 25 76.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68310747 + NM_133509 RAD51B 0 . . . 2.09 0 47 8.24 Yes 32 0.4 No 0 0 No -30 0.69 Yes 47 73.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40994926 + NM_001164269 RAD51 0 . . . 1.21 78.8 45 6.57 Yes 33 1.16 Yes 0 0 No -31 0.78 Yes 44 48.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68326406 + NM_133509 RAD51B 0 . . . 0.92 51.44 21 4.69 No 68 0.9 Yes 0 0 No -20 0.49 No 53 31.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68318529 + NM_133509 RAD51B 0 . . . 1.83 70.73 17 4.35 No 3 -0.11 No 0 0 No -30 0.86 Yes 49 29.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59932432 - NM_032043 BRIP1 0 . . . 6.37 86.22 44 6.48 Yes 29 1.67 Yes 0 0 No -25 0.63 No 42 75.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37073131 + NM_000249 MLH1 0 . . . 7.47 81.65 59 8.03 Yes 23 0.36 No 0 0 No -23 0.65 No 41 61.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215652889 - NM_000465 BARD1 0 . . . 5.94 81.73 15 5.57 Yes 0 0.21 No 0 0 No -28 0.57 No 33 46.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190708852 + NM_000534 PMS1 0 . . . 3.1 73.34 14 5.08 No 2 1.04 Yes 0 0 No -23 0.44 No 45 84.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89683644 + NM_000314 PTEN 0 . . . 2.63 54.76 96 8.72 Yes 56 1.25 Yes 0 0 No -32 0.44 No 38 97.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59893070 - NM_032043 BRIP1 0 . . . 2.48 77.91 26 4.98 No 70 0.85 Yes 0 0 No -25 0.63 No 54 37.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69144134 + NM_133509 RAD51B 0 . . . 7.07 83.38 18 4.37 No 13 0.59 No 0 0 No -17 0.64 No 45 74.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75499133 - NM_001040108 MLH3 0 . . . 6.53 92.31 13 5.29 No 23 1.16 Yes 0 0 No -18 0.37 No 35 70 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104164224 - NM_001100119 XRCC3 0 . . . 1.36 0 25 5.57 Yes 55 -3.64 No 0 0 No -28 0.75 Yes 56 42.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108220034 + NM_000051 ATM 0 . . . 1.37 74.81 15 3.97 No 69 -5.76 No 0 0 No -23 0.57 No 44 25.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89664915 + NM_000314 PTEN 0 . . . 2.38 71.16 15 4.43 No 61 1.12 Yes 0 0 No -19 0.88 Yes 39 29.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37076677 + NM_000249 MLH1 0 . . . 1.49 67.37 15 4.78 No 10 -1.2 No 0 0 No -50 0.81 Yes 48 57.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94203116 - NM_005591 MRE11 0 . . . 6.48 72.81 30 5.57 Yes -3 0.49 No 0 0 No -29 0.84 Yes 42 45.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68639331 + NM_133509 RAD51B 0 . . . 6.58 78.78 16 4.65 No 9 0.39 No 0 0 No -24 0.92 Yes 49 77.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41225342 - NM_007294 BRCA1 0 . . . 2.31 67.22 26 5.37 No -2 1.16 Yes 0 0 No -28 0.56 No 47 59.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41020926 + NM_001164269 RAD51 0 . . . 5.36 79.62 25 5 No 48 0.79 Yes 0 0 No -22 0.75 Yes 48 93.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108241636 + NM_000051 ATM 0 . . . 4.77 89.5 14 4.93 No 62 1.62 Yes 0 0 No -25 0.81 Yes 50 71.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68304863 + NM_133509 RAD51B 0 . . . 2.68 58.74 26 5.08 No 72 1.63 Yes 0 0 No -25 0.94 Yes 47 85.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68910894 + NM_133509 RAD51B 0 . . . 7.64 77.83 13 4.9 No 9 2.15 Yes 0 0 No -23 0.43 No 49 81.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56777515 + NM_058216 RAD51C 0 . . . 2.42 70.52 20 4.35 No 57 1.48 Yes 0 0 No -28 0.58 No 49 59.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56777848 + NM_058216 RAD51C 0 . . . 0.27 0 18 4.84 No 2 0.85 Yes 0 0 No -53 0.28 No 24 54.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68840595 + NM_133509 RAD51B 0 . . . 0.3 0 26 5.66 Yes 49 0.23 No 0 0 No -25 0.93 Yes 45 68.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108161714 + NM_000051 ATM 0 . . . 0.09 74.68 32 4.65 No 4 0.41 No 0 0 No -28 0.39 No 54 80.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33448183 - NM_002878 RAD51D 0 . . . 4.91 71.8 22 4.8 No 12 0.6 No 0 0 No -21 0.97 Yes 46 91.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68385001 + NM_133509 RAD51B 0 . . . 0.02 0 16 5.21 No 7 1.47 Yes 0 0 No -26 0.81 Yes 17 70.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190654454 + NM_000534 PMS1 0 . . . 5.49 78.38 24 5.48 No 39 1.27 Yes 0 0 No -23 0.6 No 19 84.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47734303 + NM_000251 MSH2 0 . . . 1.46 74.14 24 4.54 No 5 -1.57 No 0 0 No -23 0.65 No 11 8.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69111033 + NM_133509 RAD51B 0 . . . 6.53 87.87 61 6.49 Yes 37 -1.97 No 0 0 No -22 0.64 No 41 40.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69105014 + NM_133509 RAD51B 0 . . . 1.5 74.8 34 6.32 Yes 31 0.49 No 0 0 No -26 0.49 No 35 89.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32961018 + NM_000059 BRCA2 0 . . . 1.8 68.77 13 5.57 Yes 45 1.2 Yes 0 0 No -24 0.7 Yes 13 36.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23642500 - NM_024675 PALB2 0 . . . 4.73 83.16 21 5.02 No 33 1.91 Yes 0 0 No -45 0.54 No 50 82.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59871746 - NM_032043 BRIP1 0 . . . 5.65 78.3 36 7.48 Yes 18 0.5 No 0 0 No -35 0.56 No 46 83.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69136641 + NM_133509 RAD51B 0 . . . 0.82 68.97 28 4.27 No 27 0.72 No 0 0 No -21 0.86 Yes 47 53.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89728127 + NM_000314 PTEN 0 . . . 1.11 65.6 47 5.73 Yes 76 -3.98 No 0 0 No -19 0.58 No 43 80.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90975614 - NM_002485 NBN 0 . . . 0.28 0 27 5.48 No 72 0.99 Yes 0 0 No -26 0.56 No 32 89.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47725971 + NM_000251 MSH2 0 . . . 2.71 84.79 16 5.08 No 2 1.51 Yes 0 0 No -22 0.43 No 26 60.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68770743 + NM_004360 CDH1 0 . . . 4.47 78.6 26 5.51 No 22 -1.3 No 0 0 No -21 0.56 No 36 58.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47650321 + NM_000251 MSH2 0 . . . 1 64.56 18 4.58 No -4 1.1 Yes 0 0 No -18 0.49 No 62 51.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190697354 + NM_000534 PMS1 0 . . . 1.03 68.84 30 6 Yes 52 0.03 No 0 0 No -29 0.66 No 48 76.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68608380 + NM_133509 RAD51B 0 . . . 5.81 87.33 67 6.69 Yes 29 1.16 Yes 0 0 No -24 0.59 No 47 60.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47791705 + NM_000251 MSH2 0 . . . 0.96 71.06 15 6.24 Yes 74 -6.16 No 0 0 No -21 0.65 No 49 42.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48019935 + NM_000179 MSH6 0 . . . 0.36 0 28 4.75 No 14 0.84 Yes 0 0 No -23 0.43 No 39 85.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69076060 + NM_133509 RAD51B 0 . . . 0.39 0 17 6.08 Yes 49 1.1 Yes 0 0 No -30 0.37 No 37 85.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108124987 + NM_000051 ATM 0 . . . 0.73 57 34 6.84 Yes 24 0.16 No 0 0 No -24 0.39 No 34 60.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47658666 + NM_000251 MSH2 0 . . . 7.24 79.32 12 5.3 No 66 -3.51 No 0 0 No -29 0.69 Yes 46 81.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84391605 - NM_139076 FAM175A 0 . . . 3.08 71.65 57 7.9 Yes 76 0.46 No 0 0 No -31 0.59 No 41 71.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94202165 - NM_005591 MRE11 0 . . . 1.52 75.16 16 5.06 No -1 0.33 No 0 0 No -20 0.65 No 16 64.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215594233 - NM_000465 BARD1 0 . . . 4.1 90.18 24 5.48 No 7 0.81 Yes 0 0 No -21 0.42 No 46 65.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94214919 - NM_005591 MRE11 0 . . . 1.02 66.56 28 5.38 No 60 -5.6 No 0 0 No -43 0.33 No 33 34.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69026395 + NM_133509 RAD51B 0 . . . 5.89 81.73 29 5.64 Yes 58 1.55 Yes 0 0 No -28 0.6 No 46 92.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68852975 + NM_133509 RAD51B 0 . . . 3.12 0 27 5.55 No -4 -0.8 No 0 0 No -26 0.66 No 38 90.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59939076 - NM_032043 BRIP1 0 . . . 2.5 68.96 11 4.69 No 6 0.12 No 0 0 No -19 0.42 No 39 74.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23646791 - NM_024675 PALB2 0 . . . 3.75 75.05 29 6.9 Yes 73 0.3 No 0 0 No -28 0.92 Yes 44 71.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69125567 + NM_133509 RAD51B 0 . . . 3.33 82.69 28 5.38 No 64 1.05 Yes 0 0 No -27 0.74 Yes 48 62.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32964447 + NM_000059 BRCA2 0 . . . 4.53 75.73 41 6.71 Yes 2 1.02 Yes 0 0 No -30 0.48 No 51 48.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40994688 + NM_001164269 RAD51 0 . . . 6.95 84.18 31 7.47 Yes 34 1.06 Yes 0 0 No -30 0.49 No 34 61.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48013819 + NM_000179 MSH6 0 . . . 8.5 80.98 33 6.61 Yes 3 0.87 Yes 0 0 No -32 0.65 No 47 72.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69082650 + NM_133509 RAD51B 0 . . . 6.9 77.63 28 4.76 No 68 1.02 Yes 0 0 No -27 0.58 No 51 48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37042539 + NM_000249 MLH1 0 . . . 4.23 77.98 16 4.47 No 49 -1.76 No 0 0 No -31 0.35 No 41 78.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68309620 + NM_133509 RAD51B 0 . . . 3.26 75.9 20 6.04 Yes 28 0.06 No 0 0 No -26 0.68 Yes 42 88.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190647524 + NM_000534 PMS1 0 . . . 4.79 77.87 19 4.8 No 71 -5.28 No 0 0 No -18 0.79 Yes 55 36.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69066197 + NM_133509 RAD51B 0 . . . 0.07 0 41 6.71 Yes 70 -4.71 No 0 0 No -40 0.46 No 47 74.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89705584 + NM_000314 PTEN 0 . . . 4.78 81.44 16 3.8 No 37 -2.74 No 0 0 No -26 0.38 No 39 73.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190707676 + NM_000534 PMS1 0 . . . 5.66 85.84 54 7.99 Yes 33 0.95 Yes 0 0 No -24 0.77 Yes 49 63.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68690302 + NM_133509 RAD51B 0 . . . 2.79 64.13 13 5.78 Yes -4 0.51 No 0 0 No -24 0.49 No 45 54.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23621177 - NM_024675 PALB2 0 . . . 1.9 0 18 4.9 No 43 -3.59 No 0 0 No -17 0.66 No 45 85.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190742926 + NM_000534 PMS1 0 . . . 0.42 74.73 28 5.47 No 33 1.16 Yes 0 0 No -27 0.79 Yes 25 48.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68820992 + NM_004360 CDH1 0 . . . 0.38 79.63 16 5.1 No 46 0.3 No 0 0 No -26 0.51 No 52 76.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68477784 + NM_133509 RAD51B 0 . . . 4.75 81.9 43 7.49 Yes 7 0.79 Yes 0 0 No -32 0.85 Yes 46 53.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59778974 - NM_032043 BRIP1 0 . . . 1.57 70.81 26 4.08 No 65 -4.83 No 0 0 No -25 0.87 Yes 48 48.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94209027 - NM_005591 MRE11 0 . . . 1.63 75.39 31 6.39 Yes 67 0.61 No 0 0 No -30 0.65 No 51 36.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215619471 - NM_000465 BARD1 0 . . . 0.87 77.14 34 5.27 No 4 0.11 No 0 0 No -28 0.49 No 50 46.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68293978 + NM_133509 RAD51B 0 . . . 6.25 67.92 25 4.95 No 58 1.06 Yes 0 0 No -24 0.49 No 45 59.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32903939 + NM_000059 BRCA2 0 . . . 1.47 60.14 27 5.66 Yes 75 -5.05 No 0 0 No -22 0.62 No 47 62.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6028167 - NM_000535 PMS2 0 . . . 2.86 84 25 5.39 No 2 1.5 Yes 0 0 No -22 0.74 Yes 44 60.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68931439 + NM_133509 RAD51B 0 . . . 4.7 75.05 29 7.08 Yes 52 0.84 Yes 0 0 No -28 0.85 Yes 34 52.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41199835 - NM_007294 BRCA1 0 . . . 0.94 76.63 16 4.35 No 67 -5.68 No 0 0 No -28 0.31 No 48 78.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108157721 + NM_000051 ATM 0 . . . 4.36 78.42 17 5.7 Yes 58 0.9 Yes 0 0 No -20 0.58 No 46 92.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56804695 + NM_058216 RAD51C 0 . . . 1.15 77.77 10 5.2 No 32 1.32 Yes 0 0 No -28 0.45 No 15 46.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68544801 + NM_133509 RAD51B 0 . . . 2.07 75.12 27 5.37 No 72 -5.95 No 0 0 No -29 0.32 No 51 47.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105197792 + NM_021930 RINT1 0 . . . 0.01 71.2 15 4.58 No 66 -5.48 No 0 0 No -35 0.52 No 63 41.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41251616 - NM_007294 BRCA1 0 . . . 2.1 75.65 44 6.54 Yes 49 0.01 No 0 0 No -26 0.95 Yes 46 20.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190714201 + NM_000534 PMS1 0 . . . 1.27 78.87 9 3.87 No 36 1.38 Yes 0 0 No -21 0.53 No 41 82.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68371679 + NM_133509 RAD51B 0 . . . 0.42 73.55 25 6.96 Yes 53 1.11 Yes 0 0 No -24 0.76 Yes 40 85.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68595380 + NM_133509 RAD51B 0 . . . 3.05 79.13 14 5.48 No 58 -4.01 No 0 0 No -23 0.45 No 53 52.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89730387 + NM_000314 PTEN 0 . . . 4.24 73.42 15 5.2 No 59 -4.84 No 0 0 No -17 0.69 Yes 38 71.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108234029 + NM_000051 ATM 0 . . . 3.78 67.2 12 6.35 Yes 6 1.41 Yes 0 0 No -31 0.73 Yes 40 52.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69069742 + NM_133509 RAD51B 0 . . . 4.27 80.84 24 5 No 72 0.25 No 0 0 No -23 0.93 Yes 29 41.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68844089 + NM_133509 RAD51B 0 . . . 6.28 75.77 27 7.07 Yes 6 1.46 Yes 0 0 No -26 0.71 Yes 45 49.67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45798087 - NM_001048171 MUTYH 0 . . . 2.19 74.62 56 7.37 Yes -2 0.73 No 21 0.68 Yes -25 0.65 No 46 65.28 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr14 68454576 + NM_133509 RAD51B 0 . . . 5.22 77.38 33 6.14 Yes 55 0.55 No 0 0 No -27 0.81 Yes 49 76.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68895824 + NM_133509 RAD51B 0 . . . 3.75 69.24 16 4.68 No 60 0.79 Yes 0 0 No -59 0.5 No 48 92.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68297827 + NM_133509 RAD51B 0 . . . 5.12 79.03 18 7.37 Yes 57 0.59 No 0 0 No -25 0.47 No 55 36.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89692583 + NM_000314 PTEN 0 . . . 2.18 72.72 9 3.87 No 19 0.75 No 0 0 No -25 0.86 Yes 39 44.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108103059 + NM_000051 ATM 0 . . . 5.51 79.15 25 5.57 Yes 0 1.92 Yes 0 0 No -53 0.52 No 47 73.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69033428 + NM_133509 RAD51B 0 . . . 5.87 80.65 27 4.74 No 24 0.56 No 0 0 No -29 0.77 Yes 34 84.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190706409 + NM_000534 PMS1 0 . . . 0.48 80.44 16 5.06 No 61 0.5 No 0 0 No -20 0.51 No 53 18.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32918631 + NM_000059 BRCA2 0 . . . 1.88 62.93 30 6.42 Yes 47 0.25 No 0 0 No -29 0.49 No 47 89.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131942279 + NM_005732 RAD50 0 . . . 2.06 69.03 32 4.75 No 58 -1.63 No 0 0 No -26 0.46 No 41 72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105206999 + NM_021930 RINT1 0 . . . 1.02 66.46 16 5.28 No 36 -4.17 No 0 0 No -24 0.77 Yes 57 24.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131891393 + NM_005732 RAD50 0 . . . 5.52 78.97 28 5.39 No 8 1.19 Yes 0 0 No -22 0.57 No 50 85.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68813232 + NM_133509 RAD51B 0 . . . 7.2 80.31 42 6.92 Yes 67 0.45 No 0 0 No -41 0.51 No 39 78.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45796980 - NM_001048171 MUTYH 0 . . . 5.76 73.76 14 4.47 No 28 1.72 Yes 27 0.33 Yes -32 0.51 No 41 58.74 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr15 40995066 + NM_001164269 RAD51 0 . . . 2.71 84.79 22 5.1 No 2 1.51 Yes 0 0 No -21 0.69 Yes 15 39.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190701773 + NM_000534 PMS1 0 . . . 2.31 0 36 6.24 Yes 21 0.82 Yes 0 0 No -35 0.4 No 37 34.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68644818 + NM_133509 RAD51B 0 . . . 0.1 79.83 27 5.03 No 58 1.44 Yes 0 0 No -26 0.76 Yes 27 75.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59759975 - NM_032043 BRIP1 0 . . . 2.17 72.56 14 4.3 No 30 0.59 No 0 0 No -30 0.31 No 51 53.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68773636 + NM_004360 CDH1 0 . . . 1.41 84.22 35 6.08 Yes 33 1.52 Yes 0 0 No -34 0.85 Yes 50 79.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7587471 - NM_000546 TP53 0 . . . 2.73 68.34 21 4.52 No 18 0.85 Yes 0 0 No -20 0.66 Yes 40 78.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59811285 - NM_032043 BRIP1 0 . . . 2.49 0 17 4.92 No 29 0.51 No 0 0 No -26 0.77 Yes 29 82.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68334907 + NM_133509 RAD51B 0 . . . 7.16 79.48 52 8 Yes 30 0.62 No 0 0 No -51 0.55 No 47 64.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68501416 + NM_133509 RAD51B 0 . . . 1.97 0 26 3.69 No 19 0.73 No 0 0 No -25 0.64 No 39 49.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215663783 - NM_000465 BARD1 0 . . . 3.8 73.06 19 5.83 Yes 45 0.28 No 0 0 No -27 0.79 Yes 49 70.23 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94194088 - NM_005591 MRE11 0 . . . 1.82 84.68 15 4.58 No -1 0.54 No 0 0 No -57 0.62 No 49 43.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47740861 + NM_000251 MSH2 0 . . . 7.24 85.58 27 4.05 No 27 1.23 Yes 0 0 No -26 0.94 Yes 36 97.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108092612 + NM_000051 ATM 0 . . . 1.91 71.56 16 5.06 No 54 0.69 No 0 0 No -20 0.73 Yes 63 37.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7575156 - NM_000546 TP53 0 . . . 0.7 83.35 20 5.1 No 32 0.91 Yes 0 0 No -19 0.66 No 44 35.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32941545 + NM_000059 BRCA2 0 . . . 4.54 70.4 27 5.74 Yes 59 -3.94 No 0 0 No -24 0.6 No 43 54.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68375244 + NM_133509 RAD51B 0 . . . 0.64 85.52 16 4.69 No 27 0.03 No 0 0 No -31 0.95 Yes 43 50.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48017171 + NM_000179 MSH6 0 . . . 7.33 80.65 17 5.92 Yes 36 0.93 Yes 0 0 No -16 0.3 No 42 63.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68649386 + NM_133509 RAD51B 0 . . . 5.27 71.7 21 5.02 No 0 0.46 No 0 0 No -45 0.41 No 50 52.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68633713 + NM_133509 RAD51B 0 . . . 7.53 73.34 91 7.43 Yes 19 1 Yes 0 0 No -25 0.63 No 39 61.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104162912 - NM_001100119 XRCC3 0 . . . 0.56 70.15 13 3.4 No 31 -2.8 No 0 0 No -21 0.47 No 50 53.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215616929 - NM_000465 BARD1 0 . . . 0.16 62.82 25 7.19 Yes 41 0.68 No 0 0 No -22 0.56 No 13 87.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68658298 + NM_133509 RAD51B 0 . . . 5.71 81.1 26 5.66 Yes 4 0.57 No 0 0 No -52 0.47 No 46 71.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84404200 - NM_139076 FAM175A 0 . . . 5.81 76.02 11 4.8 No 10 1.73 Yes 0 0 No -24 0.3 No 48 83.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108222370 + NM_000051 ATM 0 . . . 5.21 71.35 19 5.74 Yes 28 1.18 Yes 0 0 No -57 0.74 Yes 37 82.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68815062 + NM_133509 RAD51B 0 . . . 4.48 68.44 47 7.88 Yes 66 -5.24 No 0 0 No -33 0.65 No 37 69.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90965876 - NM_002485 NBN 0 . . . 2.01 70.44 14 4.92 No 72 0.86 Yes 0 0 No -26 0.3 No 46 45.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75497713 - NM_001040108 MLH3 0 . . . 5.44 89.63 21 4.36 No 43 0.93 Yes 0 0 No -20 0.6 No 50 66.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47735915 + NM_000251 MSH2 0 . . . 6.79 78.63 25 5.2 No 53 -0.28 No 0 0 No -24 0.77 Yes 42 72.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190692209 + NM_000534 PMS1 0 . . . 1.23 79.66 26 5.09 No 40 0.42 No 0 0 No -25 0.96 Yes 37 81.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69071746 + NM_133509 RAD51B 0 . . . 2.9 74.07 19 5.11 No 61 0.36 No 0 0 No -22 0.51 No 55 27.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131945882 + NM_005732 RAD50 0 . . . 4.72 74.98 14 5.1 No 47 0.42 No 0 0 No -22 0.67 Yes 42 60.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68866890 + NM_004360 CDH1 0 . . . 4.56 81.52 24 5.48 No 65 -3.55 No 0 0 No -23 0.48 No 44 47.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59864493 - NM_032043 BRIP1 0 . . . 5.11 78.07 13 4.24 No 13 0.08 No 0 0 No -29 0.3 No 45 42.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152361469 - NM_005431 XRCC2 0 . . . 8.06 86.4 17 5.08 No 8 1.2 Yes 0 0 No -28 0.47 No 50 76.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47668989 + NM_000251 MSH2 0 . . . 0.55 0 40 5.71 Yes 45 1.13 Yes 0 0 No -23 0.84 Yes 13 57.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68330210 + NM_133509 RAD51B 0 . . . 1 61.67 22 5.24 No 21 1.67 Yes 0 0 No -21 0.61 No 47 34.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68793018 + NM_133509 RAD51B 0 . . . 6.93 81.31 24 3.76 No 21 1.57 Yes 0 0 No -24 0.31 No 42 72.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68493210 + NM_133509 RAD51B 0 . . . 6.19 0 20 4.74 No 1 1.09 Yes 0 0 No -27 0.88 Yes 48 77.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40988823 + NM_001164269 RAD51 0 . . . 1.17 76.15 21 4.84 No 31 0.58 No 0 0 No -20 0.65 No 52 88.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68479934 + NM_133509 RAD51B 0 . . . 2.18 54.22 17 4.8 No 71 -2.21 No 0 0 No -28 0.48 No 34 75.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68754434 + NM_133509 RAD51B 0 . . . 1.42 77.48 25 5.29 No 16 0.77 No 0 0 No -24 0.97 Yes 42 82.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68880303 + NM_133509 RAD51B 0 . . . 2.03 71.21 53 8.44 Yes 59 -5.64 No 0 0 No -25 0.43 No 37 56.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94154577 - NM_005591 MRE11 0 . . . 4.72 81.59 86 9.12 Yes 73 -2.1 No 0 0 No -27 0.29 No 48 87.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6050480 - NM_000535 PMS2 0 . . . 3.53 78.19 19 5 No 4 1.37 Yes 0 0 No -18 0.63 No 54 40.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68545587 + NM_133509 RAD51B 0 . . . 3.25 75.44 19 5 No 5 0.45 No 0 0 No -51 0.57 No 53 70.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68999713 + NM_133509 RAD51B 0 . . . 0.34 70.93 16 5.54 No 31 0.62 No 0 0 No -30 0.39 No 54 40.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94226375 - NM_005591 MRE11 0 . . . 6.87 71.48 20 4.79 No 30 -1.73 No 0 0 No -20 0.8 Yes 40 67.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108224226 + NM_000051 ATM 0 . . . 0.51 65.25 38 8.06 Yes 39 0.52 No 0 0 No -37 0.38 No 44 40.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47668574 + NM_000251 MSH2 0 . . . 8.07 79.66 20 5.08 No 14 0.38 No 0 0 No -19 0.65 No 44 86.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41022280 + NM_001164269 RAD51 0 . . . 0.15 75.31 26 3.29 No 28 0.65 No 0 0 No -21 0.41 No 53 31.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84381442 - NM_139076 FAM175A 0 . . . 0.72 74.68 27 5.22 No 22 -2.56 No 0 0 No -26 0.77 Yes 37 61.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29108589 - NM_001005735 CHEK2 0 . . . 2.99 68.84 24 5.63 Yes 36 1.34 Yes 0 0 No -24 0.58 No 46 43.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47645021 + NM_000251 MSH2 0 . . . 2.66 70.93 42 6.56 Yes 22 -1.62 No 0 0 No -29 0.65 No 38 37.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68763582 + NM_133509 RAD51B 0 . . . 7.57 83.87 29 7.35 Yes 4 0.29 No 0 0 No -28 0.94 Yes 51 76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68318954 + NM_133509 RAD51B 0 . . . 1.82 73.88 24 6 Yes 64 -3.25 No 0 0 No -29 0.89 Yes 52 42.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68960722 + NM_133509 RAD51B 0 . . . 2.39 68 23 3.92 No 64 -4.61 No 0 0 No -22 0.71 Yes 49 61.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68735872 + NM_133509 RAD51B 0 . . . 2.04 64.08 21 4.58 No 2 0.84 Yes 0 0 No -23 0.41 No 14 55.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68846249 + NM_133509 RAD51B 0 . . . 8.83 87.7 31 5.79 Yes 66 0.5 No 0 0 No -30 0.76 Yes 50 40.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69150178 + NM_133509 RAD51B 0 . . . 0.85 74.18 31 5.74 Yes 58 -4.39 No 0 0 No -30 0.78 Yes 47 30.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68821183 + NM_133509 RAD51B 0 . . . 1.63 80.37 42 7.46 Yes 11 1.14 Yes 0 0 No -41 0.53 No 47 84.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94170135 - NM_005591 MRE11 0 . . . 2.48 69.83 26 5.15 No 37 0.65 No 0 0 No -24 0.42 No 21 74.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68451596 + NM_133509 RAD51B 0 . . . 0.08 68.28 27 5.17 No 32 0.59 No 0 0 No -26 0.81 Yes 33 59.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69021659 + NM_133509 RAD51B 0 . . . 7.53 87.51 32 6 Yes 51 1.55 Yes 0 0 No -31 0.86 Yes 50 82.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56775283 + NM_058216 RAD51C 0 . . . 2.99 80.36 17 4.84 No 32 0.4 No 0 0 No -23 0.75 Yes 44 57.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89677956 + NM_000314 PTEN 0 . . . 0.85 74.73 38 5.31 No 33 1.17 Yes 0 0 No -37 0.77 Yes 25 47.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6049574 - NM_000535 PMS2 0 . . . 2.78 0 46 6.63 Yes 70 -1.62 No 0 0 No -38 0.64 No 30 41.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68840156 + NM_004360 CDH1 0 . . . 2.71 66.46 14 5.2 No 16 0.96 Yes 0 0 No -20 0.43 No 42 86.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41025777 + NM_001164269 RAD51 0 . . . 1.06 65.34 45 6.75 Yes 23 -2.98 No 0 0 No -20 0.89 Yes 50 62.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59825634 - NM_032043 BRIP1 0 . . . 6.82 85.22 16 6.87 Yes 5 0.1 No 0 0 No -28 0.47 No 39 53.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59900465 - NM_032043 BRIP1 0 . . . 0.77 69.01 23 5.29 No 24 1.33 Yes 0 0 No -22 0.81 Yes 41 52.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23653967 - NM_024675 PALB2 0 . . . 1.93 73.18 29 5.28 No 25 0.26 No 0 0 No -23 0.51 No 45 93.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108201032 + NM_000051 ATM 0 . . . 1.13 71.69 23 5 No 9 0.78 Yes 0 0 No -20 0.6 No 49 36.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190706378 + NM_000534 PMS1 0 . . . 0.9 71.49 29 5.12 No 60 0.79 Yes 0 0 No -28 0.59 No 47 78.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108116804 + NM_000051 ATM 0 . . . 1.18 77.34 35 6.7 Yes 13 1.71 Yes 0 0 No -34 0.7 Yes 45 77.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68871271 + NM_133509 RAD51B 0 . . . 0.4 0 33 6.78 Yes 34 1 Yes 0 0 No -32 0.55 No 48 28.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47638592 + NM_000251 MSH2 0 . . . 3.74 84 17 4.13 No 2 1.95 Yes 0 0 No -21 0.42 No 50 59.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68783716 + NM_004360 CDH1 0 . . . 2.21 69.43 15 5.32 No 24 1.3 Yes 0 0 No -29 0.62 No 34 96.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108171521 + NM_000051 ATM 0 . . . 4.24 75.53 28 5.29 No 23 0.29 No 0 0 No -27 0.37 No 42 36.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94197716 - NM_005591 MRE11 0 . . . 2.58 76.87 33 5.43 No 67 0.87 Yes 0 0 No -32 0.47 No 13 51.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68696534 + NM_133509 RAD51B 0 . . . 0.73 0 16 5.04 No 4 0.44 No 0 0 No -28 0.75 Yes 39 69.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68794121 + NM_004360 CDH1 0 . . . 4.71 84.22 30 4.57 No 33 0.91 Yes 0 0 No -24 0.57 No 50 84.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215671239 - NM_000465 BARD1 0 . . . 3.09 67.24 14 4.24 No 37 0.45 No 0 0 No -27 0.45 No 38 45.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68556987 + NM_133509 RAD51B 0 . . . 6.2 78.92 23 5 No 33 1.13 Yes 0 0 No -23 0.52 No 55 63.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32919373 + NM_000059 BRCA2 0 . . . 2.91 79.63 13 6 Yes 74 0.68 No 0 0 No -27 0.41 No 47 73.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89660348 + NM_000314 PTEN 0 . . . 7.66 82.38 39 6.06 Yes 51 0.52 No 0 0 No -38 0.43 No 47 56.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32933656 + NM_000059 BRCA2 0 . . . 2.57 75.76 42 5.03 No 64 1.16 Yes 0 0 No -41 0.73 Yes 44 68.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68847806 + NM_004360 CDH1 0 . . . 4.71 80.22 28 4.91 No 75 -4.96 No 0 0 No -27 0.94 Yes 43 46.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47760684 + NM_000251 MSH2 0 . . . 2.3 71.67 19 3.42 No 57 -3.58 No 0 0 No -19 0.71 Yes 33 52.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41002258 + NM_001164269 RAD51 0 . . . 2.31 71.02 31 7.34 Yes 74 1.67 Yes 0 0 No -30 0.81 Yes 49 65.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1204773 + NM_000455 STK11 0 . . . 1.52 84.41 27 5.74 Yes 29 0.47 No 0 0 No -26 0.69 Yes 45 85.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47668045 + NM_000251 MSH2 0 . . . 2.99 70.07 18 4.39 No 24 0.23 No 0 0 No -24 0.92 Yes 34 84.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68907668 + NM_133509 RAD51B 0 . . . 0.59 74.64 14 5.66 Yes 73 0.78 Yes 0 0 No -29 0.39 No 46 38.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68336512 + NM_133509 RAD51B 0 . . . 2.06 70.55 37 7.35 Yes 64 -5.22 No 0 0 No -36 0.94 Yes 51 70.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68665938 + NM_133509 RAD51B 0 . . . 4.24 75.17 20 4.17 No 70 2.03 Yes 0 0 No -20 0.43 No 50 57.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190662880 + NM_000534 PMS1 0 . . . 2.08 72.85 20 4.93 No 15 0.95 Yes 0 0 No -49 0.65 No 43 89.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32939911 + NM_000059 BRCA2 0 . . . 5.74 78.5 29 6.77 Yes 56 1.72 Yes 0 0 No -23 0.49 No 39 82.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59790663 - NM_032043 BRIP1 0 . . . 1.52 76.21 16 6 Yes 7 1.05 Yes 0 0 No -30 0.52 No 46 61.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89693199 + NM_000314 PTEN 0 . . . 1.1 73.41 16 5.2 No 33 0.46 No 0 0 No -15 0.39 No 33 52.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68487560 + NM_133509 RAD51B 0 . . . 7.72 77.03 35 6.78 Yes 1 1.49 Yes 0 0 No -34 0.56 No 41 89.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90975827 - NM_002485 NBN 0 . . . 5.69 75.49 17 5.48 No 7 1 Yes 0 0 No -24 0.63 No 51 71.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69004898 + NM_133509 RAD51B 0 . . . 0.07 57.19 26 5.52 No 34 -2.22 No 0 0 No -25 0.64 No 46 45.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131957469 + NM_005732 RAD50 0 . . . 9.54 82.09 28 5.7 Yes 16 1.16 Yes 0 0 No -34 0.5 No 42 83.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68468206 + NM_133509 RAD51B 0 . . . 0.6 70.14 16 5.57 Yes 51 0.35 No 0 0 No -32 0.47 No 44 69.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84405988 - NM_139076 FAM175A 0 . . . 10.55 83.95 19 4.79 No NA NA NA 0 0 No -18 0.77 Yes 46 55.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33440251 - NM_002878 RAD51D 0 . . . 3.69 77.92 36 5.36 No 64 0.59 No 0 0 No -32 0.34 No 44 88.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32949411 + NM_000059 BRCA2 0 . . . 4.49 79.62 47 6.31 Yes -3 0.24 No 0 0 No -47 0.34 No 44 78.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68446726 + NM_133509 RAD51B 0 . . . 6.81 81.56 48 6.73 Yes 14 1 Yes 0 0 No -21 0.79 Yes 44 57.44 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47651131 + NM_000251 MSH2 0 . . . 2.24 76.8 32 8.36 Yes 72 1.35 Yes 0 0 No -31 0.66 No 48 67.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68733089 + NM_133509 RAD51B 0 . . . 1.75 66.28 19 4.86 No 3 0.16 No 0 0 No -22 0.8 Yes 50 56.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190705267 + NM_000534 PMS1 0 . . . 11.87 98.88 35 4.66 No 17 0.83 Yes 0 0 No -34 0.54 No 41 84.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190687978 + NM_000534 PMS1 0 . . . 8.37 80.31 15 5.2 No 42 1.17 Yes 0 0 No -48 0.58 No 16 97.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68329791 + NM_133509 RAD51B 0 . . . 0.01 84.51 27 5.2 No 21 0.14 No 0 0 No -26 0.72 Yes 44 67.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215606904 - NM_000465 BARD1 0 . . . 1.11 68.6 60 9.44 Yes 52 0.59 No 0 0 No -28 0.6 No 45 54.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68842215 + NM_133509 RAD51B 0 . . . 3.58 81.15 23 5.2 No 66 1.17 Yes 0 0 No -22 0.52 No 29 84.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40999259 + NM_001164269 RAD51 0 . . . 0.06 70.33 16 4.69 No 60 1.52 Yes 0 0 No -21 0.49 No 54 62.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69123235 + NM_133509 RAD51B 0 . . . 2.39 77.25 28 5.38 No 69 -2.55 No 0 0 No -27 0.85 Yes 49 41.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69012873 + NM_133509 RAD51B 0 . . . 2.37 0 35 7.61 Yes 5 0.35 No 0 0 No -21 0.46 No 45 75.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75510600 - NM_001040108 MLH3 0 . . . 2.43 80.34 29 5.09 No 32 1.13 Yes 0 0 No -23 0.45 No 42 41.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68900317 + NM_133509 RAD51B 0 . . . 0.88 0 14 5.74 Yes 76 1.93 Yes 0 0 No -24 0.36 No 31 54.99 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215670020 - NM_000465 BARD1 0 . . . 2.1 74 18 4.9 No 35 1.07 Yes 0 0 No -17 0.77 Yes 46 46.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68619733 + NM_133509 RAD51B 0 . . . 5.79 74.21 20 7.14 Yes 27 0.18 No 0 0 No -19 0.73 Yes 24 54.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69096053 + NM_133509 RAD51B 0 . . . 7.15 89.02 24 4.26 No 28 0.43 No 0 0 No -24 0.82 Yes 42 84.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41208085 - NM_007294 BRCA1 0 . . . 6.03 82.99 16 4.51 No 42 0.51 No 0 0 No -15 0.29 No 51 53.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190681505 + NM_000534 PMS1 0 . . . 3.07 74.57 27 5.2 No 29 0.77 No 0 0 No -26 0.7 Yes 26 86.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69028928 + NM_133509 RAD51B 0 . . . 3.09 81.37 77 8.52 Yes 3 1.43 Yes 0 0 No -26 0.78 Yes 27 86.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89714755 + NM_000314 PTEN 0 . . . 1.45 0 21 5.06 No 10 0.25 No 0 0 No -20 0.61 No 48 47.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680504 + NM_000251 MSH2 0 . . . 3.11 0 18 5.05 No 22 0.2 No 0 0 No -27 0.37 No 36 36.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84388675 - NM_139076 FAM175A 0 . . . 1.3 76.62 21 6.71 Yes 62 0.9 Yes 0 0 No -20 0.38 No 51 59.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33427607 - NM_002878 RAD51D 0 . . . 9.27 74.58 34 5.74 Yes 15 0.65 No 0 0 No -33 0.65 No 43 86.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108211873 + NM_000051 ATM 0 . . . 7.6 81.76 17 4.02 No 16 1.65 Yes 0 0 No -27 0.68 Yes 42 97.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68672825 + NM_133509 RAD51B 0 . . . 4.96 76.78 27 4.6 No 53 0.67 No 0 0 No -23 0.44 No 43 95.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68645481 + NM_133509 RAD51B 0 . . . 5.21 79.55 17 5.57 Yes 3 -0.85 No 0 0 No -16 0.37 No 49 82.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152371759 - NM_005431 XRCC2 0 . . . 4.09 76.16 24 4.83 No 53 -3.88 No 0 0 No -23 0.93 Yes 35 47.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41243736 - NM_007294 BRCA1 0 . . . 0.25 73.33 20 4.9 No 18 -2.58 No 0 0 No -20 0.78 Yes 43 34.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68343732 + NM_133509 RAD51B 0 . . . 2.88 67.27 23 4.86 No 34 0.3 No 0 0 No -22 0.73 Yes 50 82.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68640366 + NM_133509 RAD51B 0 . . . 0.21 0 18 4.24 No 42 0.57 No 0 0 No -17 0.51 No 45 74.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68382158 + NM_133509 RAD51B 0 . . . 6.3 78.44 22 5.96 Yes 24 0.23 No 0 0 No -21 0.7 Yes 43 76.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68421976 + NM_133509 RAD51B 0 . . . 0.82 81.16 21 7.55 Yes 40 -2.71 No 0 0 No -20 0.52 No 50 74.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108104349 + NM_000051 ATM 0 . . . 1.89 76.79 25 5.39 No 62 0.4 No 0 0 No -22 0.74 Yes 50 60.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47668107 + NM_000251 MSH2 0 . . . 2.48 60.23 9 4.11 No 38 -2.36 No 0 0 No -28 0.52 No 44 68.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41265854 - NM_007294 BRCA1 0 . . . 0.59 63.71 32 5.72 Yes 14 1.31 Yes 0 0 No -31 0.74 Yes 49 58.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56813274 + NM_058216 RAD51C 0 . . . 3.85 75.99 55 6.73 Yes 60 -3.28 No 0 0 No -29 0.65 No 45 40.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108121897 + NM_000051 ATM 0 . . . 2.87 86.02 25 5.39 No 14 1.48 Yes 0 0 No -24 0.74 Yes 33 87.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69035361 + NM_133509 RAD51B 0 . . . 6.78 74.78 22 4.63 No 52 -1.28 No 0 0 No -52 0.86 Yes 35 65.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68611180 + NM_133509 RAD51B 0 . . . 3.49 79.83 21 4.69 No 70 -5.32 No 0 0 No -20 0.84 Yes 51 59.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68868699 + NM_004360 CDH1 0 . . . 0.12 80.34 15 5.28 No 54 1.25 Yes 0 0 No -51 0.3 No 52 42.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59790696 - NM_032043 BRIP1 0 . . . 0.27 67.12 31 5.91 Yes 32 0.61 No 0 0 No -21 0.58 No 26 79.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68802236 + NM_004360 CDH1 0 . . . 0.08 69.97 21 5.66 Yes 26 0.95 Yes 0 0 No -20 0.55 No 26 26.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32973599 + NM_000059 BRCA2 0 . . . 0.89 76.96 57 6.84 Yes 8 0.13 No 0 0 No -27 0.87 Yes 50 59.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68524042 + NM_133509 RAD51B 0 . . . 4.68 69.64 17 6.31 Yes 33 0.47 No 0 0 No -21 0.27 No 47 62.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68744737 + NM_133509 RAD51B 0 . . . 1.22 83.52 27 7.21 Yes 27 0.71 No 0 0 No -26 0.94 Yes 26 76.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105196615 + NM_021930 RINT1 0 . . . 5.06 75.13 22 4.58 No 16 1.11 Yes 0 0 No -21 0.93 Yes 42 92.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69070076 + NM_133509 RAD51B 0 . . . 3.78 82.14 16 6.89 Yes 23 -2.26 No 0 0 No -22 0.31 No 48 46.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68583370 + NM_133509 RAD51B 0 . . . 2.14 76.82 16 6.86 Yes 39 0.38 No 0 0 No -28 0.39 No 41 57.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47669124 + NM_000251 MSH2 0 . . . 0.78 80.49 33 6.85 Yes 25 1.58 Yes 0 0 No -32 0.74 Yes 33 53.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59892166 - NM_032043 BRIP1 0 . . . 4.34 67.69 22 6.48 Yes 15 1.23 Yes 0 0 No -21 0.86 Yes 39 72.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33448621 - NM_002878 RAD51D 0 . . . 0.68 69.24 37 4.05 No 63 0.82 Yes 0 0 No -17 0.33 No 42 34.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68785739 + NM_133509 RAD51B 0 . . . 8.27 87.08 31 7.28 Yes 43 0.62 No 0 0 No -28 0.59 No 46 86.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59937857 - NM_032043 BRIP1 0 . . . 1.95 79.61 29 5.56 Yes 71 1.11 Yes 0 0 No -25 0.59 No 54 71.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47683729 + NM_000251 MSH2 0 . . . 6.67 75.55 19 6.16 Yes 1 0.73 No 0 0 No -30 0.69 Yes 38 76.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69075490 + NM_133509 RAD51B 0 . . . 10.49 85.54 27 5.2 No 74 -2.14 No 0 0 No -26 0.65 No 49 70.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68955251 + NM_133509 RAD51B 0 . . . 5.25 78.99 24 5.2 No 36 0.41 No 0 0 No -24 0.52 No 35 54.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68583043 + NM_133509 RAD51B 0 . . . 0.98 72.37 16 4.69 No 59 0.77 No 0 0 No -38 0.45 No 49 48.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215613192 - NM_000465 BARD1 0 . . . 0.32 75.77 32 4.86 No 34 1.35 Yes 0 0 No -56 0.59 No 44 85.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68640756 + NM_133509 RAD51B 0 . . . 4.65 72.59 34 6.32 Yes 23 -2.46 No 0 0 No -33 0.64 No 25 86.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68862919 + NM_004360 CDH1 0 . . . 3.71 74.13 24 5.91 Yes 34 -3.59 No 0 0 No -23 0.88 Yes 54 60.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32905738 + NM_000059 BRCA2 0 . . . 2.19 74.08 25 5.33 No 39 -3.14 No 0 0 No -27 0.65 No 52 77.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215596789 - NM_000465 BARD1 0 . . . 2.84 80.75 23 4.69 No 18 0.24 No 0 0 No -54 0.63 No 46 60.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47676291 + NM_000251 MSH2 0 . . . 4.53 66.85 24 6.47 Yes 22 0.68 No 0 0 No -24 0.56 No 35 69.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68987448 + NM_133509 RAD51B 0 . . . 2.26 0 17 5.57 Yes 63 1.24 Yes 0 0 No -16 0.71 Yes 13 40.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68355281 + NM_133509 RAD51B 0 . . . 2.96 78.88 23 6.57 Yes 67 -4.86 No 0 0 No -22 0.7 Yes 39 77.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59756940 - NM_032043 BRIP1 0 . . . 5.32 79.34 27 6.47 Yes -2 0.01 No 0 0 No -26 0.68 Yes 47 62.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32942490 + NM_000059 BRCA2 0 . . . 0.21 0 24 5.99 Yes 15 0.14 No 0 0 No -23 0.93 Yes 45 86.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108205519 + NM_000051 ATM 0 . . . 1.17 72.22 30 5.19 No 35 -3.86 No 0 0 No -29 0.55 No 46 45.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29101750 - NM_001005735 CHEK2 0 . . . 3.2 85.37 26 5.66 Yes 4 1.05 Yes 0 0 No -23 0.61 No 54 69.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131955943 + NM_005732 RAD50 0 . . . 2.15 69.75 18 4.47 No 52 0.37 No 0 0 No -17 0.81 Yes 39 80.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75490360 - NM_001040108 MLH3 0 . . . 6.8 74 20 4.62 No 74 0.23 No 0 0 No -19 0.75 Yes 45 73.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215657704 - NM_000465 BARD1 0 . . . 0.77 53.57 24 6.15 Yes 60 0.55 No 0 0 No -23 0.89 Yes 44 29.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68584021 + NM_133509 RAD51B 0 . . . 3.26 71.19 20 4.57 No 47 -4.16 No 0 0 No -17 0.58 No 43 72.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190718336 + NM_000534 PMS1 0 . . . 6.92 87.26 20 4.78 No 9 1.13 Yes 0 0 No -19 0.7 Yes 49 92.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89655257 + NM_000314 PTEN 0 . . . 3.03 59.94 20 6.08 Yes 46 0.69 No 0 0 No -19 0.49 No 44 45.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69088306 + NM_133509 RAD51B 0 . . . 6.37 80.39 22 5.82 Yes 19 0.79 Yes 0 0 No -21 0.64 No 44 79.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68380744 + NM_133509 RAD51B 0 . . . 6.24 89.42 19 7.55 Yes 62 1.96 Yes 0 0 No -18 0.73 Yes 20 79.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59834737 - NM_032043 BRIP1 0 . . . 2.72 76.17 25 5.2 No 31 0.78 Yes 0 0 No -24 0.64 No 38 54.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21966369 - NM_000077 CDKN2A 0 . . . 7.65 80.65 30 5.72 Yes 15 -0.24 No 0 0 No -29 0.75 Yes 51 43.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32897408 + NM_000059 BRCA2 0 . . . 4.96 76.85 21 5.1 No 8 1.14 Yes 0 0 No -20 0.86 Yes 50 94.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68915990 + NM_133509 RAD51B 0 . . . 1.62 0 30 5.74 Yes 54 0.96 Yes 0 0 No -29 0.69 Yes 52 70.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68886679 + NM_133509 RAD51B 0 . . . 8.25 84.59 46 6.7 Yes 13 0.97 Yes 0 0 No -27 0.48 No 45 91.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47742925 + NM_000251 MSH2 0 . . . 2.79 73.89 22 4.69 No 70 -3.92 No 0 0 No -21 0.91 Yes 47 78.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59866908 - NM_032043 BRIP1 0 . . . 0.71 82.06 12 4.24 No 36 0.82 Yes 0 0 No -28 0.72 Yes 37 83.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89667916 + NM_000314 PTEN 0 . . . 3.53 75.21 24 5.15 No 62 1.07 Yes 0 0 No -23 0.73 Yes 40 51.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94197827 - NM_005591 MRE11 0 . . . 0.42 84.89 21 5.66 Yes 42 1.09 Yes 0 0 No -20 0.57 No 49 73.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29118363 - NM_001005735 CHEK2 0 . . . 5.2 85.02 13 3.87 No 5 1.23 Yes 0 0 No -32 0.39 No 53 86.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89702220 + NM_000314 PTEN 0 . . . 3.72 76.59 20 5.46 No 35 1.15 Yes 0 0 No -23 0.76 Yes 48 69.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29101899 - NM_001005735 CHEK2 0 . . . 0.21 0 23 5.34 No 8 0.76 No 0 0 No -29 0.52 No 38 52.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47779629 + NM_000251 MSH2 0 . . . 2.06 69.23 23 6.18 Yes 62 0.28 No 0 0 No -23 0.7 Yes 43 77.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75492557 - NM_001040108 MLH3 0 . . . 3.37 72.89 37 5.6 Yes 73 -5.63 No 0 0 No -22 0.78 Yes 47 43.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190701121 + NM_000534 PMS1 0 . . . 0.08 0 31 5.96 Yes -2 0.57 No 0 0 No -26 0.59 No 60 37.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68896351 + NM_133509 RAD51B 0 . . . 3.61 0 22 5.39 No 50 0.66 No 0 0 No -21 0.6 No 29 91.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108177604 + NM_000051 ATM 0 . . . 3.89 78 20 5.71 Yes 3 0.81 Yes 0 0 No -48 0.94 Yes 42 54.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90944008 - NM_002485 NBN 0 . . . 1.37 87.87 14 4.18 No 33 1.11 Yes 0 0 No -19 0.72 Yes 25 38.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59929371 - NM_032043 BRIP1 0 . . . 5.17 85.99 25 5.57 Yes 2 1.03 Yes 0 0 No -29 0.49 No 39 74.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32900454 + NM_000059 BRCA2 0 . . . 3.16 76.82 26 5.48 No 20 0.11 No 0 0 No -25 0.93 Yes 46 45.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47780131 + NM_000251 MSH2 0 . . . 9.56 78.65 21 6.16 Yes 16 1.66 Yes 0 0 No -20 0.78 Yes 42 88.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108166184 + NM_000051 ATM 0 . . . 2.87 0 18 4.8 No 52 -2.41 No 0 0 No -38 0.91 Yes 38 78.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89684560 + NM_000314 PTEN 0 . . . 2.1 74.96 36 6.33 Yes 49 -3.83 No 0 0 No -24 0.62 No 50 92.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47761420 + NM_000251 MSH2 0 . . . 7.49 86.09 32 5.56 No 49 1.55 Yes 0 0 No -32 0.41 No 50 76.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59920407 - NM_032043 BRIP1 0 . . . 2.31 70.43 26 6.28 Yes 49 1.39 Yes 0 0 No -25 0.61 No 18 45.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47778158 + NM_000251 MSH2 0 . . . 2.77 0 65 8.13 Yes 6 0.95 Yes 0 0 No -40 0.64 No 52 76.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68989279 + NM_133509 RAD51B 0 . . . 1.84 63.83 24 5.29 No 40 1.02 Yes 0 0 No -23 0.89 Yes 45 52.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37067718 + NM_000249 MLH1 0 . . . 5.99 75.84 33 5.96 Yes 40 0.52 No 0 0 No -24 0.9 Yes 38 69.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47670129 + NM_000251 MSH2 0 . . . 2.31 0 37 6.23 Yes 58 0.92 Yes 0 0 No -36 0.8 Yes 21 94.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75482325 - NM_001040108 MLH3 0 . . . 5.84 72.59 17 4.69 No 36 0.35 No 0 0 No -25 0.73 Yes 49 39.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69027860 + NM_133509 RAD51B 0 . . . 1.12 0 21 4.69 No 14 1.97 Yes 0 0 No -20 0.52 No 44 80.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68760977 + NM_133509 RAD51B 0 . . . 5.29 84.43 23 5.38 No 33 1.85 Yes 0 0 No -17 0.35 No 52 73.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59763441 - NM_032043 BRIP1 0 . . . 2.92 68.11 28 5.2 No 44 0.19 No 0 0 No -20 0.58 No 56 44.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215671663 - NM_000465 BARD1 0 . . . 0.16 72.16 13 5.28 No 15 -1.53 No 0 0 No -26 0.54 No 51 41.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68481104 + NM_133509 RAD51B 0 . . . 4.65 0 22 4.02 No 52 0.78 Yes 0 0 No -22 0.71 Yes 24 80.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59858412 - NM_032043 BRIP1 0 . . . 0.49 0 21 5 No 22 0.36 No 0 0 No -20 0.87 Yes 36 82.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1204967 + NM_000455 STK11 0 . . . 0.09 74.68 33 5.92 Yes 46 0.66 No 0 0 No -22 0.88 Yes 36 37.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32941903 + NM_000059 BRCA2 0 . . . 2.53 79.13 28 6.48 Yes 66 -5.45 No 0 0 No -21 0.56 No 48 71.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48034593 + NM_000179 MSH6 0 . . . 5.52 84.42 11 4.87 No 60 1.41 Yes 0 0 No -50 0.28 No 48 68.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68706806 + NM_133509 RAD51B 0 . . . 1.51 80.4 62 8.05 Yes 22 0.85 Yes 0 0 No -25 0.77 Yes 48 42.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68459989 + NM_133509 RAD51B 0 . . . 6.45 72.83 32 5.74 Yes 17 0.57 No 0 0 No -28 0.39 No 47 55.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68822379 + NM_133509 RAD51B 0 . . . 8.55 84.1 17 4.58 No 9 0.14 No 0 0 No -21 0.34 No 49 49.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59875292 - NM_032043 BRIP1 0 . . . 3.32 82.21 24 6.08 Yes 5 1.32 Yes 0 0 No -23 0.86 Yes 53 58.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75483231 - NM_001040108 MLH3 0 . . . 3.64 69.07 25 8.23 Yes 75 0.57 No 0 0 No -25 0.55 No 52 73.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21985245 - NM_000077 CDKN2A 0 . . . 1.6 69.51 20 5.1 No 36 0.56 No 0 0 No -40 0.69 Yes 45 56.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68569794 + NM_133509 RAD51B 0 . . . 3.19 72.99 13 5.1 No 6 1.47 Yes 0 0 No -22 0.52 No 52 47.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68775182 + NM_133509 RAD51B 0 . . . 1.82 80.08 28 4.71 No 8 0.2 No 0 0 No -27 0.49 No 50 90.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6047950 - NM_000535 PMS2 0 . . . 0.99 61.48 13 5.48 No 34 -4.13 No 0 0 No -23 0.71 Yes 54 53.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152372663 - NM_005431 XRCC2 0 . . . 7.32 75.85 29 5.38 No 0 1.72 Yes 0 0 No -28 0.78 Yes 48 45.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68816833 + NM_133509 RAD51B 0 . . . 5.48 70.74 16 5.19 No 48 0.46 No 0 0 No -20 0.58 No 41 92.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68464742 + NM_133509 RAD51B 0 . . . 3.6 69.92 25 5.43 No 53 0.75 No 0 0 No -23 0.63 No 44 67.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68775589 + NM_004360 CDH1 0 . . . 0.38 65.64 23 5.5 No 37 -3.3 No 0 0 No -22 0.53 No 54 41.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32918172 + NM_000059 BRCA2 0 . . . 2.39 0 33 5.63 Yes 7 1.11 Yes 0 0 No -27 0.66 Yes 38 48.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108198616 + NM_000051 ATM 0 . . . 5.61 77.62 30 6.4 Yes 67 0.39 No 0 0 No -29 0.78 Yes 34 63.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131973695 + NM_005732 RAD50 0 . . . 8.72 86.04 30 5.82 Yes 3 1.12 Yes 0 0 No -29 0.75 Yes 44 70.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108152234 + NM_000051 ATM 0 . . . 6.42 78.22 29 5.66 Yes 63 0.76 No 0 0 No -28 0.93 Yes 50 84.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94191624 - NM_005591 MRE11 0 . . . 3.39 71.24 21 6.44 Yes 47 0.21 No 0 0 No -30 0.74 Yes 45 81.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68546141 + NM_133509 RAD51B 0 . . . 4.45 74.42 29 5.46 No 27 0.37 No 0 0 No -28 0.8 Yes 49 41.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68917199 + NM_133509 RAD51B 0 . . . 2.77 66.1 26 4.42 No 23 1.47 Yes 0 0 No -25 0.78 Yes 40 48.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52434958 - NM_004656 BAP1 0 . . . 2.74 70.2 17 4.49 No 52 0.42 No 0 0 No -46 0.49 No 50 84.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89677790 + NM_000314 PTEN 0 . . . 2.71 84.79 21 4.9 No 2 1.51 Yes 0 0 No -20 0.89 Yes 25 62.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89672132 + NM_000314 PTEN 0 . . . 5.69 81.2 20 6.03 Yes 41 0.77 No 0 0 No -30 0.5 No 45 71.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59826471 - NM_032043 BRIP1 0 . . . 5.71 84.41 20 5.07 No 30 0 No 0 0 No -23 0.75 Yes 22 60.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29092758 - NM_001005735 CHEK2 0 . . . 6.14 69.64 61 7.62 Yes 16 2.07 Yes 0 0 No -25 0.62 No 42 87.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56803775 + NM_058216 RAD51C 0 . . . 4.53 70.51 42 6.38 Yes 67 1.18 Yes 0 0 No -27 0.68 Yes 34 55.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89733516 + NM_000314 PTEN 0 . . . 0.12 0 24 4.96 No 11 1.04 Yes 0 0 No -23 0.64 No 26 49.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47738691 + NM_000251 MSH2 0 . . . 5.16 84.34 13 4.7 No 27 -2.78 No 0 0 No -24 0.47 No 45 71.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131913267 + NM_005732 RAD50 0 . . . 9.25 88.34 31 6.08 Yes 18 0.57 No 0 0 No -30 0.68 Yes 44 60.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69145972 + NM_133509 RAD51B 0 . . . 4.64 69.05 19 5.48 No 32 0.6 No 0 0 No -25 0.39 No 37 61.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68432826 + NM_133509 RAD51B 0 . . . 0.24 69.98 15 5.2 No 41 0.06 No 0 0 No -46 0.62 No 52 72.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6030452 - NM_000535 PMS2 0 . . . 1.12 75.18 21 4.85 No 38 1.72 Yes 0 0 No -20 0.36 No 20 81.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41269672 - NM_007294 BRCA1 0 . . . 2.52 72.02 17 4.8 No 16 0.81 Yes 0 0 No -22 0.66 No 42 88.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29136025 - NM_001005735 CHEK2 0 . . . 1.62 81.43 20 4.9 No 4 0.71 No 0 0 No -19 0.62 No 54 64.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215675874 - NM_000465 BARD1 0 . . . 3.78 78.56 14 5.01 No 65 -4.66 No 0 0 No -26 0.61 No 55 55.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41224465 - NM_007294 BRCA1 0 . . . 4.81 76.63 22 4.74 No 15 0.2 No 0 0 No -27 0.9 Yes 43 64.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68357293 + NM_133509 RAD51B 0 . . . 4.15 67.92 13 4.36 No 1 2.11 Yes 0 0 No -21 0.35 No 57 57.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59841168 - NM_032043 BRIP1 0 . . . 4.07 75.58 22 4.56 No 53 0.85 Yes 0 0 No -21 0.73 Yes 41 71.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69024461 + NM_133509 RAD51B 0 . . . 0.9 72.86 44 5.38 No 5 -2.42 No 0 0 No -27 0.63 No 46 43.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32935732 + NM_000059 BRCA2 0 . . . 0.54 76.44 35 6.3 Yes 36 -2.68 No 0 0 No -23 0.59 No 22 70.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215613008 - NM_000465 BARD1 0 . . . 2.29 70.39 17 4.91 No 55 0.52 No 0 0 No -23 0.71 Yes 41 35.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7564624 - NM_000546 TP53 0 . . . 0.09 74.68 35 5.86 Yes 4 0.41 No 0 0 No -28 0.67 Yes 54 71.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68995633 + NM_133509 RAD51B 0 . . . 1.07 79.59 15 5.29 No 0 0.74 No 0 0 No -28 0.41 No 48 28.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68394662 + NM_133509 RAD51B 0 . . . 8.88 94.01 25 6.4 Yes 14 0.32 No 0 0 No -24 0.8 Yes 44 70.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131911756 + NM_005732 RAD50 0 . . . 6.75 86.91 17 4.48 No 63 0.68 No 0 0 No -23 0.56 No 53 61.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23619193 - NM_024675 PALB2 0 . . . 4.34 0 33 5.23 No 15 0.77 Yes 0 0 No -32 0.57 No 43 88.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37036960 + NM_000249 MLH1 0 . . . 5.08 73.78 42 5.12 No 59 0.94 Yes 0 0 No -26 0.81 Yes 42 94.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75479046 - NM_001040108 MLH3 0 . . . 3.89 76.44 18 4.69 No 3 1.22 Yes 0 0 No -17 0.55 No 44 77.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68704553 + NM_133509 RAD51B 0 . . . 5.12 69.7 23 6.4 Yes 15 1 Yes 0 0 No -25 0.83 Yes 43 91.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37036537 + NM_000249 MLH1 0 . . . 6.19 83.85 38 4.44 No 58 1.13 Yes 0 0 No -21 0.42 No 42 73.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33438205 - NM_002878 RAD51D 0 . . . 2 80.34 28 7.68 Yes 35 1.82 Yes 0 0 No -27 0.93 Yes 23 76.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90995573 - NM_002485 NBN 0 . . . 2.89 70.07 35 6.34 Yes 62 1.44 Yes 0 0 No -34 0.71 Yes 39 89.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69047814 + NM_133509 RAD51B 0 . . . 0.17 0 19 5.22 No 42 0.84 Yes 0 0 No -24 0.7 Yes 57 65.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89651928 + NM_000314 PTEN 0 . . . 2.45 69.61 28 5.27 No 35 0.92 Yes 0 0 No -27 0.6 No 23 91.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68557135 + NM_133509 RAD51B 0 . . . 9.3 80.39 31 4.01 No -1 0.9 Yes 0 0 No -30 0.74 Yes 46 92.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41260328 - NM_007294 BRCA1 0 . . . 3.3 84.79 79 9.11 Yes 2 1.34 Yes 0 0 No -32 0.33 No 16 88.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21990738 - NM_000077 CDKN2A 0 . . . 4.21 83.36 26 5.48 No 71 -5.7 No 0 0 No -25 0.55 No 49 57.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108126477 + NM_000051 ATM 0 . . . 3.68 76.97 23 5.09 No 74 0.76 No 0 0 No -25 0.65 No 46 77.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41240408 - NM_007294 BRCA1 0 . . . 0.54 78.43 18 5.29 No 4 0.06 No 0 0 No -22 0.41 No 49 35.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68325533 + NM_133509 RAD51B 0 . . . 5.19 66.41 24 5.28 No 12 0.69 No 0 0 No -23 0.92 Yes 46 88.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29112494 - NM_001005735 CHEK2 0 . . . 3.01 73.62 27 5.5 No 9 1.6 Yes 0 0 No -27 0.54 No 49 90.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41244337 - NM_007294 BRCA1 0 . . . 0.39 65.22 14 5.64 Yes 67 -5.87 No 0 0 No -22 0.35 No 52 19.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59755777 - NM_032043 BRIP1 0 . . . 4.67 89.09 46 6.71 Yes 69 0.25 No 0 0 No -38 0.5 No 50 86.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68557968 + NM_133509 RAD51B 0 . . . 1.46 67.5 14 4.23 No 45 -4.07 No 0 0 No -35 0.8 Yes 39 73.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68367178 + NM_133509 RAD51B 0 . . . 3.25 78.44 15 6.28 Yes 40 0.57 No 0 0 No -23 0.52 No 46 36.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68917146 + NM_133509 RAD51B 0 . . . 3.08 78.45 15 5.57 Yes 33 1.02 Yes 0 0 No -25 0.39 No 25 50.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215599013 - NM_000465 BARD1 0 . . . 2.6 71.83 17 6.9 Yes 44 1.3 Yes 0 0 No -33 0.58 No 40 51.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75497301 - NM_001040108 MLH3 0 . . . 1.15 73.06 16 4.47 No 34 0.76 No 0 0 No -15 0.63 No 52 48.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47762368 + NM_000251 MSH2 0 . . . 1.5 0 28 5.82 Yes 19 0.47 No 0 0 No -27 0.4 No 45 40.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68737973 + NM_133509 RAD51B 0 . . . 0.01 0 17 4.44 No 16 -2.8 No 0 0 No -23 0.89 Yes 33 68.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59766249 - NM_032043 BRIP1 0 . . . 3 66.74 14 5 No 52 0.48 No 0 0 No -21 0.51 No 44 69.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69135341 + NM_133509 RAD51B 0 . . . 3.27 85.3 39 7.35 Yes 23 0.1 No 0 0 No -38 0.57 No 42 64.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47728992 + NM_000251 MSH2 0 . . . 5.42 70.1 31 6.09 Yes 12 1.35 Yes 0 0 No -26 0.75 Yes 42 55.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59869436 - NM_032043 BRIP1 0 . . . 0.88 64.24 26 5.09 No 23 0.18 No 0 0 No -25 0.64 No 41 58.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59909794 - NM_032043 BRIP1 0 . . . 5.04 78.63 21 4.4 No 58 0.04 No 0 0 No -20 0.87 Yes 47 61.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90961058 - NM_002485 NBN 0 . . . 2.14 72.27 28 4.18 No 71 -3.2 No 0 0 No -21 0.51 No 36 83.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47651000 + NM_000251 MSH2 0 . . . 6.94 80.24 34 5.4 No 14 1.19 Yes 0 0 No -24 0.52 No 44 91.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68801403 + NM_004360 CDH1 0 . . . 3.42 65.39 33 6 Yes 62 1.55 Yes 0 0 No -32 0.72 Yes 50 57.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23618110 - NM_024675 PALB2 0 . . . 0.09 74.68 20 4.9 No 4 0.41 No 0 0 No -19 0.82 Yes 54 70.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29124903 - NM_001005735 CHEK2 0 . . . 7.35 88.6 16 5.18 No 35 1.48 Yes 0 0 No -20 0.82 Yes 46 71.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23635139 - NM_024675 PALB2 0 . . . 2.73 61.15 16 4.69 No 19 1.74 Yes 0 0 No -51 0.4 No 39 86.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68852321 + NM_004360 CDH1 0 . . . 1.99 69.57 9 4.46 No 41 -4.56 No 0 0 No -18 0.61 No 48 71.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68437052 + NM_133509 RAD51B 0 . . . 11.34 90.48 14 5.05 No 60 -3.83 No 0 0 No -46 0.55 No 39 85.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47664931 + NM_000251 MSH2 0 . . . 4.7 82.16 17 6.55 Yes 60 0.74 No 0 0 No -25 0.74 Yes 45 78.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90956266 - NM_002485 NBN 0 . . . 4.23 63.09 16 4.95 No 24 0.86 Yes 0 0 No -20 0.6 No 34 78.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68737910 + NM_133509 RAD51B 0 . . . 8.54 72.14 23 5.74 Yes 42 1.2 Yes 0 0 No -22 0.76 Yes 35 44.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190667888 + NM_000534 PMS1 0 . . . 1.12 60.74 17 5.7 Yes 24 0.24 No 0 0 No -17 0.41 No 34 65.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105177885 + NM_021930 RINT1 0 . . . 4.9 74.07 15 5.39 No 68 1.7 Yes 0 0 No -22 0.21 No 44 81.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68831620 + NM_004360 CDH1 0 . . . 0.01 57.81 35 4.34 No 46 -2.99 No 0 0 No -32 0.36 No 43 15.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41275171 - NM_007294 BRCA1 0 . . . 1.65 81.38 16 5.59 Yes 10 0.91 Yes 0 0 No -26 0.42 No 48 89.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68432414 + NM_133509 RAD51B 0 . . . 2 71.93 17 6.93 Yes 46 1.33 Yes 0 0 No -25 0.64 No 38 38.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59775201 - NM_032043 BRIP1 0 . . . 4.4 76.26 33 6.18 Yes 70 -3.08 No 0 0 No -32 0.45 No 41 63.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105192944 + NM_021930 RINT1 0 . . . 4.02 73.39 36 5.97 Yes 66 0.41 No 0 0 No -25 0.51 No 44 83.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89631695 + NM_000314 PTEN 0 . . . 5.74 80.56 15 5.73 Yes 54 -3.61 No 0 0 No -23 0.52 No 41 47.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510547 - NM_001040108 MLH3 0 . . . 2.89 68.34 39 6.92 Yes 13 0.8 Yes 0 0 No -33 0.78 Yes 45 76.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105172658 + NM_021930 RINT1 0 . . . 0.87 69.97 40 6.63 Yes 37 -2.66 No 0 0 No -39 0.6 No 51 34.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131965946 + NM_005732 RAD50 0 . . . 1.23 74.73 20 7.14 Yes 34 1.18 Yes 0 0 No -19 0.63 No 24 62.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40995892 + NM_001164269 RAD51 0 . . . 6.62 76.98 37 6.16 Yes 16 1.49 Yes 0 0 No -25 0.45 No 42 80.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69062902 + NM_133509 RAD51B 0 . . . 0.91 67.44 33 7.41 Yes 59 0.25 No 0 0 No -32 0.52 No 48 69.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23630715 - NM_024675 PALB2 0 . . . 1.81 69.25 16 4.69 No 58 -3.89 No 0 0 No -23 0.9 Yes 48 35.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69131969 + NM_133509 RAD51B 0 . . . 0.47 83.58 21 4.8 No 0 0.42 No 0 0 No -17 0.42 No 52 25.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47799843 + NM_000251 MSH2 0 . . . 0.03 0 33 5.88 Yes 30 -0.81 No 0 0 No -32 0.9 Yes 45 52.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69082453 + NM_133509 RAD51B 0 . . . 5.01 74.05 20 4.8 No 16 1.04 Yes 0 0 No -18 0.77 Yes 42 79.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32904491 + NM_000059 BRCA2 0 . . . 5.61 81.26 19 4.8 No 38 0.69 No 0 0 No -35 0.58 No 45 95.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68798094 + NM_004360 CDH1 0 . . . 2.51 0 52 7.61 Yes 72 -4.16 No 0 0 No -30 0.78 Yes 39 62.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48013493 + NM_000179 MSH6 0 . . . 2.69 84.41 39 6.95 Yes 11 0.98 Yes 0 0 No -24 0.69 Yes 47 79.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69134912 + NM_133509 RAD51B 0 . . . 6.98 82.22 13 4.34 No 55 1.15 Yes 0 0 No -23 0.42 No 44 89.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59909539 - NM_032043 BRIP1 0 . . . 2.18 77.8 9 3.86 No 35 1.02 Yes 0 0 No -22 0.52 No 32 45.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68469038 + NM_133509 RAD51B 0 . . . 4.09 71.96 34 6.25 Yes 18 0.72 No 0 0 No -38 0.73 Yes 46 80.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56780961 + NM_058216 RAD51C 0 . . . 1.11 66.78 39 6.32 Yes 34 -3.22 No 0 0 No -38 0.7 Yes 51 58.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89627694 + NM_000314 PTEN 0 . . . 6.82 78.12 25 5.57 Yes 32 0.9 Yes 0 0 No -24 0.65 No 46 46.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69093282 + NM_133509 RAD51B 0 . . . 3.54 68.41 11 5.39 No 15 0.55 No 0 0 No -22 0.34 No 43 60.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68982807 + NM_133509 RAD51B 0 . . . 1.13 64.03 21 5.02 No 63 1.66 Yes 0 0 No -20 0.5 No 47 39.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33433743 - NM_002878 RAD51D 0 . . . 5.57 90.14 18 6.58 Yes 70 1.32 Yes 0 0 No -20 0.56 No 48 48.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69137658 + NM_133509 RAD51B 0 . . . 6.28 79.99 49 6.66 Yes 52 -1.74 No 0 0 No -19 0.38 No 47 59.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68369785 + NM_133509 RAD51B 0 . . . 1.11 74.76 30 5.7 Yes 33 1.01 Yes 0 0 No -29 0.88 Yes 18 92.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69133406 + NM_133509 RAD51B 0 . . . 0.17 75.89 47 5.68 Yes 51 0.41 No 0 0 No -50 0.31 No 51 58.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68698862 + NM_133509 RAD51B 0 . . . 2.17 70.86 15 5.1 No 63 -4.95 No 0 0 No -19 0.44 No 41 82.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47638024 + NM_000251 MSH2 0 . . . 1.73 86.71 18 5.74 Yes 33 1.13 Yes 0 0 No -26 0.51 No 50 42.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131969141 + NM_005732 RAD50 0 . . . 9.92 89.82 29 4.99 No 3 1.33 Yes 0 0 No -26 0.61 No 40 87.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108176459 + NM_000051 ATM 0 . . . 1.11 76.21 17 7 Yes 34 1.39 Yes 0 0 No -16 0.82 Yes 42 28.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69122650 + NM_133509 RAD51B 0 . . . 1.16 77.6 32 4.88 No 3 1.21 Yes 0 0 No -28 0.65 No 18 53.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47640865 + NM_000251 MSH2 0 . . . 1.5 68.84 38 6.16 Yes 65 0.28 No 0 0 No -23 0.37 No 46 85.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68819276 + NM_004360 CDH1 0 . . . 1.55 85.02 17 4.23 No 4 0.72 No 0 0 No -16 0.42 No 54 71.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68307701 + NM_133509 RAD51B 0 . . . 3 85.79 25 4.78 No 5 1.01 Yes 0 0 No -24 0.84 Yes 53 74.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68530182 + NM_133509 RAD51B 0 . . . 0.22 59.7 17 6.34 Yes 41 0.27 No 0 0 No -16 0.62 No 41 76.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1214994 + NM_000455 STK11 0 . . . 5.75 76.78 32 5.57 Yes 36 0.45 No 0 0 No -27 0.72 Yes 27 52.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190694685 + NM_000534 PMS1 0 . . . 4.76 0 39 4.83 No 34 1.73 Yes 0 0 No -23 0.68 Yes 41 76.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68674171 + NM_133509 RAD51B 0 . . . 2.24 77.95 33 6.23 Yes 62 -5.03 No 0 0 No -32 0.77 Yes 48 28.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885412 - NM_032043 BRIP1 0 . . . 0.05 63.75 34 6.16 Yes 54 0.35 No 0 0 No -33 0.75 Yes 49 75.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68845022 + NM_133509 RAD51B 0 . . . 0.96 57.13 49 5.63 Yes 36 0.81 Yes 0 0 No -34 0.48 No 26 51.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68458017 + NM_133509 RAD51B 0 . . . 0.81 0 17 4.58 No 68 0.94 Yes 0 0 No -44 0.3 No 52 86.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108100771 + NM_000051 ATM 0 . . . 8.96 74.42 27 5.2 No 74 -2.31 No 0 0 No -24 0.51 No 37 50.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69121518 + NM_133509 RAD51B 0 . . . 7.8 82.17 41 6.49 Yes 53 0.21 No 0 0 No -24 0.52 No 46 59.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68366157 + NM_133509 RAD51B 0 . . . 3.98 86.92 17 3.68 No 62 1.54 Yes 0 0 No -25 0.83 Yes 52 68.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41255407 - NM_007294 BRCA1 0 . . . 6.5 86.2 19 4.9 No 9 0.98 Yes 0 0 No -28 0.3 No 49 88.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59799856 - NM_032043 BRIP1 0 . . . 5.51 89.03 22 5.29 No 31 0 No 0 0 No -21 0.81 Yes 49 55.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105188211 + NM_021930 RINT1 0 . . . 5.5 90.92 61 7.22 Yes 49 1.88 Yes 0 0 No -21 0.64 No 14 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69048052 + NM_133509 RAD51B 0 . . . 7.05 76.48 55 8.55 Yes 61 0.32 No 0 0 No -54 0.68 Yes 50 72.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47768319 + NM_000251 MSH2 0 . . . 8 71.87 19 4.99 No 11 2.01 Yes 0 0 No -49 0.37 No 47 87.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105173737 + NM_021930 RINT1 0 . . . 0.88 0 25 5.57 Yes 11 0.67 No 0 0 No -24 0.89 Yes 47 72.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90979498 - NM_002485 NBN 0 . . . 1.4 68.07 12 4.17 No 76 1.07 Yes 0 0 No -26 0.66 No 46 52.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215618184 - NM_000465 BARD1 0 . . . 1.28 68.61 76 6.68 Yes 53 0.95 Yes 0 0 No -30 0.68 Yes 37 84.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68714735 + NM_133509 RAD51B 0 . . . 1.71 0 33 7.28 Yes 8 0.1 No 0 0 No -32 0.88 Yes 50 76.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47796092 + NM_000251 MSH2 0 . . . 3.55 72.98 30 6.4 Yes 24 0.93 Yes 0 0 No -29 0.7 Yes 34 91.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89662503 + NM_000314 PTEN 0 . . . 6.32 80.28 19 5 No 1 1.53 Yes 0 0 No -44 0.43 No 44 51.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68536621 + NM_133509 RAD51B 0 . . . 4.79 80 21 5.47 No 5 1 Yes 0 0 No -26 0.75 Yes 48 58.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89721737 + NM_000314 PTEN 0 . . . 5.22 78.29 36 5.27 No 28 0.2 No 0 0 No -31 0.61 No 46 90.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59836438 - NM_032043 BRIP1 0 . . . 4.36 79.64 20 4.8 No 60 1 Yes 0 0 No -19 0.9 Yes 47 47.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68839516 + NM_133509 RAD51B 0 . . . 4.83 69.1 9 5.2 No 51 0.9 Yes 0 0 No -22 0.62 No 47 63.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68946908 + NM_133509 RAD51B 0 . . . 0.78 84.22 23 5.74 Yes 68 -1.59 No 0 0 No -22 0.53 No 50 47.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94212167 - NM_005591 MRE11 0 . . . 0.43 76.85 20 5.1 No 4 0.64 No 0 0 No -19 0.71 Yes 48 59.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29117679 - NM_001005735 CHEK2 0 . . . 5.32 74.6 15 4.22 No 7 -1.6 No 0 0 No -24 0.76 Yes 31 43.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68776035 + NM_133509 RAD51B 0 . . . 5.22 79.12 48 5.73 Yes 1 0.74 No 0 0 No -31 0.5 No 37 90.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215634492 - NM_000465 BARD1 0 . . . 2.14 80.4 19 4.36 No 55 0.97 Yes 0 0 No -18 0.87 Yes 52 49.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68716176 + NM_133509 RAD51B 0 . . . 1.57 67.86 43 6.15 Yes 62 -4.68 No 0 0 No -40 0.54 No 43 31.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69049685 + NM_133509 RAD51B 0 . . . 1.45 67.72 60 8.78 Yes 2 0.24 No 0 0 No -26 0.56 No 56 43.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68509238 + NM_133509 RAD51B 0 . . . 4.99 78.44 14 5.52 No 36 0.74 No 0 0 No -27 0.24 No 49 67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47760176 + NM_000251 MSH2 0 . . . 3.46 0 29 6.32 Yes 69 0.69 No 0 0 No -28 0.86 Yes 40 89.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89708666 + NM_000314 PTEN 0 . . . 1.14 78.46 45 7.06 Yes 57 -3.82 No 0 0 No -33 0.54 No 48 77.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68867978 + NM_004360 CDH1 0 . . . 0.96 82.77 32 6.71 Yes 33 0.99 Yes 0 0 No -31 0.91 Yes 50 67.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105173585 + NM_021930 RINT1 0 . . . 2.42 79.31 19 4.54 No NA NA NA 0 0 No -26 0.38 No 51 63.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41022255 + NM_001164269 RAD51 0 . . . 3.29 79.18 16 4.59 No 60 0.94 Yes 0 0 No -23 0.63 No 44 53.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90990402 - NM_002485 NBN 0 . . . 1.34 68.25 22 4.43 No 18 -3.38 No 0 0 No -26 0.54 No 47 55.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68851468 + NM_004360 CDH1 0 . . . 3.84 72.95 22 5.1 No 59 -2.31 No 0 0 No -21 0.68 Yes 39 31.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108201592 + NM_000051 ATM 0 . . . 2.48 82.19 18 4.69 No 24 0.37 No 0 0 No -32 0.45 No 47 60.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41217519 - NM_007294 BRCA1 0 . . . 1.87 80.12 21 5.56 Yes 6 0.88 Yes 0 0 No -21 0.52 No 47 47.62 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41019698 + NM_001164269 RAD51 0 . . . 3.2 80.12 27 5.2 No 63 -2.39 No 0 0 No -26 0.35 No 42 64.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29082051 - NM_001005735 CHEK2 0 . . . 2.53 68.36 25 4.74 No 10 1.78 Yes 0 0 No -24 0.71 Yes 42 81.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89708002 + NM_000314 PTEN 0 . . . 7.68 83.16 33 5.83 Yes 2 0.92 Yes 0 0 No -32 0.83 Yes 46 85.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75513723 - NM_001040108 MLH3 0 . . . 2.79 79 17 4.78 No 65 0.86 Yes 0 0 No -22 0.74 Yes 49 53.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41015686 + NM_001164269 RAD51 0 . . . 1.62 72.87 15 4.17 No 28 0.24 No 0 0 No -31 0.43 No 31 45.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33425938 - NM_002878 RAD51D 0 . . . 0.39 75.87 39 5.71 Yes 64 0.19 No 0 0 No -31 0.78 Yes 47 60.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23623806 - NM_024675 PALB2 0 . . . 0.68 74.02 24 6.98 Yes 4 0.15 No 0 0 No -23 0.79 Yes 54 86.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68759074 + NM_133509 RAD51B 0 . . . 0.82 62.29 26 4.53 No 8 0.97 Yes 0 0 No -21 0.62 No 27 36.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47695741 + NM_000251 MSH2 0 . . . 9.73 91.78 24 5.19 No 35 1.03 Yes 0 0 No -18 0.4 No 43 66.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131917075 + NM_005732 RAD50 0 . . . 2.89 68.34 15 5.65 Yes 13 0.77 No 0 0 No -25 0.83 Yes 45 74.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69130235 + NM_133509 RAD51B 0 . . . 4.3 68.42 23 3.43 No 63 1.25 Yes 0 0 No -42 0.43 No 30 61.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6021437 - NM_000535 PMS2 0 . . . 0.32 64.39 47 7.53 Yes 1 0.55 No 0 0 No -46 0.92 Yes 45 61.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7585576 - NM_000546 TP53 0 . . . 2.1 76.63 14 3.83 No 56 -3.75 No 0 0 No -25 0.78 Yes 50 74.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29086428 - NM_001005735 CHEK2 0 . . . 0.84 72.33 14 5.1 No 28 0.2 No 0 0 No -28 0.43 No 19 71.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190679026 + NM_000534 PMS1 0 . . . 1.77 61.15 32 5.66 Yes 48 0.45 No 0 0 No -31 0.38 No 45 37.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104178919 - NM_001100119 XRCC3 0 . . . 6.19 80.55 29 5.63 Yes 69 0.96 Yes 0 0 No -28 0.89 Yes 27 38.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131921426 + NM_005732 RAD50 0 . . . 2.53 0 19 7.07 Yes 32 1.11 Yes 0 0 No -18 0.55 No 38 79.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105171537 + NM_021930 RINT1 0 . . . 7.92 80.24 40 5.04 No 3 0.23 No 0 0 No -24 0.49 No 41 41.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131968915 + NM_005732 RAD50 0 . . . 1.08 84.22 15 5.19 No 42 1.1 Yes 0 0 No -23 0.46 No 16 45.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29134569 - NM_001005735 CHEK2 0 . . . 5.06 73.04 11 4.12 No 30 1.73 Yes 0 0 No -20 0.52 No 45 84.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108185018 + NM_000051 ATM 0 . . . 2.55 78.29 19 4.35 No -2 0.88 Yes 0 0 No -25 0.49 No 49 39.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47641053 + NM_000251 MSH2 0 . . . 1.51 70.39 26 6.66 Yes 63 1.44 Yes 0 0 No -26 0.66 Yes 15 41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68665357 + NM_133509 RAD51B 0 . . . 3.39 0 28 5.53 No 67 0.89 Yes 0 0 No -27 0.75 Yes 39 78.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89671592 + NM_000314 PTEN 0 . . . 8.32 87.1 43 6.85 Yes 13 1.23 Yes 0 0 No -21 0.54 No 45 90.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190665710 + NM_000534 PMS1 0 . . . 5.75 68.7 104 10.53 Yes 69 1.38 Yes 0 0 No -32 0.72 Yes 33 50.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37059515 + NM_000249 MLH1 0 . . . 2.84 74.33 15 5.66 Yes 5 0.08 No 0 0 No -25 0.42 No 53 84.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68751903 + NM_133509 RAD51B 0 . . . 6.08 85.83 37 5.43 No 29 -2.97 No 0 0 No -37 0.57 No 45 77.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59876058 - NM_032043 BRIP1 0 . . . 0.16 71.63 22 5.83 Yes 50 0.58 No 0 0 No -21 0.91 Yes 50 51.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68745959 + NM_133509 RAD51B 0 . . . 4.9 74.21 23 5.08 No 60 -5.37 No 0 0 No -41 0.63 No 47 35.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68349697 + NM_133509 RAD51B 0 . . . 6.24 82.31 10 4 No 58 1.16 Yes 0 0 No -23 0.66 No 55 56.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152368054 - NM_005431 XRCC2 0 . . . 1.68 65.98 33 5.74 Yes 23 1.48 Yes 0 0 No -32 0.51 No 40 62.96 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152347073 - NM_005431 XRCC2 0 . . . 4.34 77.94 32 5.74 Yes 47 -2.83 No 0 0 No -28 0.36 No 33 59.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108212838 + NM_000051 ATM 0 . . . 10.33 85.89 20 4.47 No 39 0.78 Yes 0 0 No -19 0.77 Yes 50 86.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131980533 + NM_005732 RAD50 0 . . . 0.75 71.93 16 5.26 No 58 1.15 Yes 0 0 No -21 0.55 No 49 58.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68765802 + NM_133509 RAD51B 0 . . . 11.03 87.63 21 5.48 No 50 1.31 Yes 0 0 No -20 0.47 No 42 54.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68430424 + NM_133509 RAD51B 0 . . . 0.98 65.64 18 4.24 No 74 1.5 Yes 0 0 No -40 0.56 No 36 63.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68868158 + NM_004360 CDH1 0 . . . 0.51 74.59 41 5.13 No 51 0.84 Yes 0 0 No -36 0.78 Yes 51 38.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68555690 + NM_133509 RAD51B 0 . . . 2.76 72.37 19 5.57 Yes 48 0.88 Yes 0 0 No -24 0.87 Yes 60 53.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69066392 + NM_133509 RAD51B 0 . . . 6.68 79.55 33 7.14 Yes 54 0.92 Yes 0 0 No -43 0.38 No 36 92.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89709988 + NM_000314 PTEN 0 . . . 0.09 76.63 16 4.66 No 58 -3.88 No 0 0 No -19 0.32 No 43 59.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21987182 - NM_000077 CDKN2A 0 . . . 4.77 70.78 16 5.2 No 13 0.59 No 0 0 No -25 0.49 No 45 48.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215672305 - NM_000465 BARD1 0 . . . 5.99 82 15 6.98 Yes 3 0.46 No 0 0 No -29 0.65 No 51 45.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94158169 - NM_005591 MRE11 0 . . . 6.95 71.55 22 5.29 No 53 -2.08 No 0 0 No -46 0.6 No 49 57.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68910731 + NM_133509 RAD51B 0 . . . 1.36 68.89 14 5.2 No 19 0.79 Yes 0 0 No -49 0.77 Yes 21 83.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89671232 + NM_000314 PTEN 0 . . . 8.03 90.65 39 7.04 Yes 45 1.81 Yes 0 0 No -38 0.71 Yes 43 67.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190692178 + NM_000534 PMS1 0 . . . 7.48 82.35 24 5.44 No 51 1.16 Yes 0 0 No -23 0.49 No 49 65.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68872999 + NM_133509 RAD51B 0 . . . 3.53 66.15 28 5.39 No 74 -5.33 No 0 0 No -27 0.86 Yes 40 73.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89624759 + NM_000314 PTEN 0 . . . 2.86 72.9 45 6.72 Yes 70 -5.73 No 0 0 No -24 0.77 Yes 50 64.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68480816 + NM_133509 RAD51B 0 . . . 1.16 75.65 18 4.64 No 40 1.02 Yes 0 0 No -20 0.55 No 18 41.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29096728 - NM_001005735 CHEK2 0 . . . 0.11 86.74 17 4.97 No 55 -2.83 No 0 0 No -22 0.67 Yes 50 53.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90982450 - NM_002485 NBN 0 . . . 6 90.92 21 9.13 Yes 76 1.56 Yes 0 0 No -21 0.57 No 43 66.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131953040 + NM_005732 RAD50 0 . . . 8.87 89.74 24 6.86 Yes 53 0.54 No 0 0 No -23 0.5 No 36 67.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131898876 + NM_005732 RAD50 0 . . . 5.63 74.47 16 4.69 No 38 0.4 No 0 0 No -22 0.68 Yes 32 53.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69108646 + NM_133509 RAD51B 0 . . . 0.23 63.47 34 7.63 Yes 39 -4.16 No 0 0 No -33 0.72 Yes 46 54.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59819898 - NM_032043 BRIP1 0 . . . 3.57 70.67 20 5.58 Yes 6 0.18 No 0 0 No -19 0.78 Yes 52 51.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41002320 + NM_001164269 RAD51 0 . . . 1.11 63.14 21 5.2 No 56 1.21 Yes 0 0 No -51 0.94 Yes 42 57.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89633498 + NM_000314 PTEN 0 . . . 0.68 69.75 15 6.08 Yes 12 -2.79 No 0 0 No -26 0.4 No 46 62.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69056581 + NM_133509 RAD51B 0 . . . 10.78 79.46 22 6 Yes 60 0.75 No 0 0 No -32 0.52 No 43 62.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41269921 - NM_007294 BRCA1 0 . . . 6.73 82.78 40 6.69 Yes 12 0.45 No 0 0 No -19 0.43 No 38 54.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69144287 + NM_133509 RAD51B 0 . . . 4 72.15 30 4.14 No 31 1.83 Yes 0 0 No -23 0.66 No 27 96.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94173632 - NM_005591 MRE11 0 . . . 3.37 69.4 16 5.01 No 40 1.12 Yes 0 0 No -20 0.43 No 50 56.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47712806 + NM_000251 MSH2 0 . . . 1.39 73.85 37 5.99 Yes 73 -2.61 No 0 0 No -30 0.48 No 49 50.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56783444 + NM_058216 RAD51C 0 . . . 1.27 69.2 16 6.32 Yes 51 -4.65 No 0 0 No -36 0.54 No 48 23.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21981263 - NM_000077 CDKN2A 0 . . . 4.65 72.81 14 5.28 No 76 1.01 Yes 0 0 No -21 0.25 No 36 70.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68877123 + NM_133509 RAD51B 0 . . . 5.59 82.73 14 4.91 No 0 0.79 Yes 0 0 No -21 0.81 Yes 50 56.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68961355 + NM_133509 RAD51B 0 . . . 4.3 79.52 23 4.84 No 37 1 Yes 0 0 No -22 0.54 No 48 71.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94228904 - NM_005591 MRE11 0 . . . 3.98 70.86 17 4.69 No -2 0.61 No 0 0 No -43 0.29 No 46 64.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68771745 + NM_133509 RAD51B 0 . . . 1.74 55.57 21 5.9 Yes 47 1.41 Yes 0 0 No -31 0.2 No 11 35.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59902046 - NM_032043 BRIP1 0 . . . 3.21 80.78 24 4.85 No 40 0.61 No 0 0 No -23 0.93 Yes 18 66.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37033041 + NM_000249 MLH1 0 . . . 0.78 74.42 14 5.37 No 26 0.69 No 0 0 No -24 0.7 Yes 43 58.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32958067 + NM_000059 BRCA2 0 . . . 1.3 70.38 53 7.34 Yes 61 -5.34 No 0 0 No -34 0.66 No 49 24.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94216707 - NM_005591 MRE11 0 . . . 1.46 69.78 20 5.71 Yes 68 -5.3 No 0 0 No -31 0.42 No 47 50.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59854951 - NM_032043 BRIP1 0 . . . 5.29 74.19 25 5.54 No 47 0.81 Yes 0 0 No -25 0.69 Yes 39 48.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68846410 + NM_004360 CDH1 0 . . . 3.97 73.12 13 5.74 Yes -3 0.33 No 0 0 No -26 0.64 No 46 79.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90947755 - NM_002485 NBN 0 . . . 0.77 0 20 4.98 No 2 0.5 No 0 0 No -19 0.69 Yes 56 41.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6029946 - NM_000535 PMS2 0 . . . 0.82 72.62 22 4.22 No 60 1.16 Yes 0 0 No -36 0.51 No 41 59.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131948775 + NM_005732 RAD50 0 . . . 7.77 87.09 29 5.39 No 16 0.23 No 0 0 No -28 0.56 No 50 72.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6034145 - NM_000535 PMS2 0 . . . 0.32 80.38 21 4.61 No 35 1.67 Yes 0 0 No -29 0.45 No 23 46.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108194712 + NM_000051 ATM 0 . . . 2.84 74.44 34 6.87 Yes 10 1.11 Yes 0 0 No -33 0.41 No 44 96.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7582681 - NM_000546 TP53 0 . . . 1.67 77.69 19 4.79 No 64 -4.23 No 0 0 No -22 0.8 Yes 52 33.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59873064 - NM_032043 BRIP1 0 . . . 5.88 83.35 33 7.62 Yes 29 -1.7 No 0 0 No -32 0.94 Yes 45 73.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105191012 + NM_021930 RINT1 0 . . . 9.67 92.12 25 5.39 No 5 0.71 No 0 0 No -22 0.6 No 46 85.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37045054 + NM_000249 MLH1 0 . . . 2.1 74.73 30 5.54 No 20 -1.89 No 0 0 No -29 0.65 No 41 58.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68522168 + NM_133509 RAD51B 0 . . . 0.9 65.87 19 4.8 No 46 -4.26 No 0 0 No -24 0.61 No 33 57.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68441444 + NM_133509 RAD51B 0 . . . 2.38 77.66 25 6.45 Yes 60 0.3 No 0 0 No -24 0.91 Yes 44 95.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68288528 + NM_133509 RAD51B 0 . . . 3.47 73.19 17 5.48 No 55 0.55 No 0 0 No -26 0.65 No 21 67.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32970212 + NM_000059 BRCA2 0 . . . 0.69 67.8 22 4.06 No 53 -1.82 No 0 0 No -21 0.63 No 47 73.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41010065 + NM_001164269 RAD51 0 . . . 0.49 71.38 35 6.4 Yes 24 0.02 No 0 0 No -34 0.63 No 34 68.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6026021 - NM_000535 PMS2 0 . . . 0.22 0 13 4.36 No 69 0.41 No 0 0 No -21 0.85 Yes 50 38.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108238735 + NM_000051 ATM 0 . . . 0.35 62.43 30 4.9 No 64 -6.31 No 0 0 No -29 0.7 Yes 50 61.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59846804 - NM_032043 BRIP1 0 . . . 2.13 71.02 19 5 No 68 0.59 No 0 0 No -29 0.42 No 45 67.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131939556 + NM_005732 RAD50 0 . . . 0.49 77.13 14 5 No -2 0.36 No 0 0 No -32 0.63 No 49 39.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68801749 + NM_004360 CDH1 0 . . . 5.86 78.08 16 3.13 No 66 -5.93 No 0 0 No -34 0.89 Yes 49 77.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68614872 + NM_133509 RAD51B 0 . . . 3.24 72.08 50 6.59 Yes 52 0.82 Yes 0 0 No -21 0.29 No 47 83.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69015636 + NM_133509 RAD51B 0 . . . 3.68 80.1 18 3.54 No 33 2.13 Yes 0 0 No -22 0.78 Yes 25 20 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108240290 + NM_000051 ATM 0 . . . 1.95 64.47 21 5.83 Yes 57 0.09 No 0 0 No -20 0.58 No 44 87.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108205500 + NM_000051 ATM 0 . . . 1.25 69.54 25 4.2 No 74 0.91 Yes 0 0 No -21 0.32 No 49 82.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89704686 + NM_000314 PTEN 0 . . . 0.27 73.48 31 4.59 No 57 -3.6 No 0 0 No -30 0.54 No 47 79.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68396025 + NM_133509 RAD51B 0 . . . 6.39 83.92 14 3.77 No 50 0.78 Yes 0 0 No -23 0.55 No 40 72.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68871996 + NM_133509 RAD51B 0 . . . 6.72 86.64 23 4.9 No 5 0.25 No 0 0 No -22 0.62 No 53 63.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215642630 - NM_000465 BARD1 0 . . . 5.5 74.2 27 5.2 No 67 0.9 Yes 0 0 No -59 0.63 No 49 47.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131955438 + NM_005732 RAD50 0 . . . 1.75 78.78 24 6.63 Yes 66 0.59 No 0 0 No -23 0.8 Yes 51 79.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69054558 + NM_133509 RAD51B 0 . . . 3.44 76.24 44 6.71 Yes 64 -5.19 No 0 0 No -26 0.45 No 50 90.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108158758 + NM_000051 ATM 0 . . . 3.95 70.71 25 5.19 No 74 1.92 Yes 0 0 No -25 0.79 Yes 39 62.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94211143 - NM_005591 MRE11 0 . . . 2.49 80.12 23 4.61 No -1 0.56 No 0 0 No -22 0.73 Yes 44 55.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45807055 - NM_001048171 MUTYH 0 . . . 7.91 76.04 31 5.48 No 5 1.72 Yes 0 0 No -28 0.81 Yes 40 60.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6035090 - NM_000535 PMS2 0 . . . 5.14 84.04 22 5.2 No 6 1.05 Yes 0 0 No -44 0.63 No 45 69.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68499613 + NM_133509 RAD51B 0 . . . 5 0 31 6.49 Yes 13 1.37 Yes 0 0 No -30 0.4 No 45 91.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32964925 + NM_000059 BRCA2 0 . . . 0.85 0 23 4.12 No 57 0.77 No 0 0 No -26 0.72 Yes 46 68.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68934790 + NM_133509 RAD51B 0 . . . 4.88 83.37 33 5 No 54 0.93 Yes 0 0 No -25 0.49 No 28 65.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59938590 - NM_032043 BRIP1 0 . . . 2.12 66.14 24 5.42 No 2 0.46 No 0 0 No -23 0.79 Yes 50 64.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69057813 + NM_133509 RAD51B 0 . . . 1.55 68.96 37 6.13 Yes 33 1.79 Yes 0 0 No -22 0.54 No 25 78.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68661712 + NM_133509 RAD51B 0 . . . 3.77 79.18 41 6.6 Yes 35 1.26 Yes 0 0 No -27 0.57 No 23 72.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47744381 + NM_000251 MSH2 0 . . . 1.56 0 26 5.1 No 18 1.72 Yes 0 0 No -25 0.62 No 40 88.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131966993 + NM_005732 RAD50 0 . . . 3.6 85.02 38 6.25 Yes 4 1.2 Yes 0 0 No -26 0.5 No 46 77.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69018104 + NM_133509 RAD51B 0 . . . 5.01 87.81 34 5.35 No 68 0.67 No 0 0 No -23 0.44 No 50 67.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32960859 + NM_000059 BRCA2 0 . . . 8.6 73.51 32 5.66 Yes 27 1.33 Yes 0 0 No -32 0.51 No 42 96.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59862926 - NM_032043 BRIP1 0 . . . 5.75 80.08 17 5.57 Yes 1 1.25 Yes 0 0 No -21 0.6 No 43 93.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68855978 + NM_004360 CDH1 0 . . . 3.8 74.38 25 5.12 No 15 0.73 No 0 0 No -24 0.69 Yes 43 41.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89651873 + NM_000314 PTEN 0 . . . 0.24 0 22 5.92 Yes 65 0.04 No 0 0 No -26 0.48 No 57 28.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69038007 + NM_133509 RAD51B 0 . . . 0.01 61.6 13 4.8 No 27 0.99 Yes 0 0 No -38 0.55 No 31 73.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29106141 - NM_001005735 CHEK2 0 . . . 0.81 76.04 57 8.43 Yes 37 1.45 Yes 0 0 No -30 0.73 Yes 21 70.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69026757 + NM_133509 RAD51B 0 . . . 0.65 70.57 20 7.07 Yes 76 -6.24 No 0 0 No -19 0.52 No 52 74.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190650423 + NM_000534 PMS1 0 . . . 6.49 84.47 26 5 No 0 0.13 No 0 0 No -22 0.76 Yes 58 37.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47710353 + NM_000251 MSH2 0 . . . 1.33 58.82 33 7.85 Yes 12 0.94 Yes 0 0 No -28 0.74 Yes 38 61.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215647092 - NM_000465 BARD1 0 . . . 9.6 84.05 41 6.7 Yes 38 0.05 No 0 0 No -24 0.64 No 45 69.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94168715 - NM_005591 MRE11 0 . . . 2.22 0 17 6.79 Yes 56 1.04 Yes 0 0 No -16 0.72 Yes 22 48.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215602375 - NM_000465 BARD1 0 . . . 0.95 0 27 5.2 No 4 0.9 Yes 0 0 No -26 0.59 No 31 33.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59829992 - NM_032043 BRIP1 0 . . . 3.98 78.85 21 6.24 Yes 0 0.06 No 0 0 No -20 0.79 Yes 46 47.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69054639 + NM_133509 RAD51B 0 . . . 1.7 66.38 21 5.19 No 71 -5.46 No 0 0 No -20 0.57 No 60 38.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59927838 - NM_032043 BRIP1 0 . . . 8.16 77.09 28 4.77 No 20 1.11 Yes 0 0 No -27 0.85 Yes 38 97.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68838828 + NM_004360 CDH1 0 . . . 4.54 89.25 14 4.03 No 9 0.94 Yes 0 0 No -28 0.56 No 49 94.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59887419 - NM_032043 BRIP1 0 . . . 2.03 72.88 25 4.52 No 9 1.94 Yes 0 0 No -24 0.84 Yes 49 62.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69041594 + NM_133509 RAD51B 0 . . . 2.21 91.54 29 7.35 Yes 57 -3.86 No 0 0 No -28 0.94 Yes 48 71.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59768249 - NM_032043 BRIP1 0 . . . 9.85 78.5 43 5.11 No 13 0.97 Yes 0 0 No -42 0.69 Yes 45 97.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68360998 + NM_133509 RAD51B 0 . . . 2 81.74 28 6.73 Yes 5 0.75 No 0 0 No -27 0.67 Yes 38 77.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190736322 + NM_000534 PMS1 0 . . . 0.16 67.07 47 6.95 Yes 42 0.66 No 0 0 No -24 0.46 No 54 68.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680331 + NM_000251 MSH2 0 . . . 1.38 72.98 33 5.92 Yes 6 0.63 No 0 0 No -16 0.43 No 42 64.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68543944 + NM_133509 RAD51B 0 . . . 0.54 64.09 34 7.32 Yes 27 0.07 No 0 0 No -33 0.71 Yes 42 87.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32948974 + NM_000059 BRCA2 0 . . . 7.24 90.45 16 5.48 No 52 0.85 Yes 0 0 No -28 0.45 No 54 52.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68863590 + NM_133509 RAD51B 0 . . . 0.2 0 29 5.92 Yes 71 -4.7 No 0 0 No -22 0.57 No 48 46.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68547267 + NM_133509 RAD51B 0 . . . 0.71 0 17 4.28 No -4 0.13 No 0 0 No -47 0.47 No 56 29.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190703660 + NM_000534 PMS1 0 . . . 6.33 74.38 17 6.93 Yes -3 0.49 No 0 0 No -29 0.46 No 39 67.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68824660 + NM_133509 RAD51B 0 . . . 4.41 64.76 23 5.26 No 14 1.35 Yes 0 0 No -31 0.5 No 44 83.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131912749 + NM_005732 RAD50 0 . . . 4.31 72.26 21 4.7 No 73 0.27 No 0 0 No -21 0.26 No 42 32.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47754976 + NM_000251 MSH2 0 . . . 7.03 86.92 14 4.47 No 18 0.46 No 0 0 No -19 0.24 No 46 75.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7579144 - NM_000546 TP53 0 . . . 4.06 70.71 24 5.2 No 3 2.04 Yes 0 0 No -23 0.57 No 40 76.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33443690 - NM_002878 RAD51D 0 . . . 2.8 69.9 14 4.57 No 17 1.23 Yes 0 0 No -27 0.81 Yes 41 91.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68940178 + NM_133509 RAD51B 0 . . . 3.18 82.11 23 5.39 No 44 -2.3 No 0 0 No -22 0.38 No 54 36.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33441190 - NM_002878 RAD51D 0 . . . 5.62 86.9 38 7.06 Yes 33 1.04 Yes 0 0 No -37 0.36 No 50 88.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47642789 + NM_000251 MSH2 0 . . . 4.39 76.73 19 5.48 No 33 1.03 Yes 0 0 No -27 0.38 No 42 54.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68826345 + NM_133509 RAD51B 0 . . . 1.92 71.18 16 4 No 75 -4.02 No 0 0 No -21 0.8 Yes 47 67.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84406163 - NM_139076 FAM175A 0 . . . 7.6 83.72 18 4.9 No 64 -2.15 No 0 0 No -23 0.94 Yes 53 65.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68841669 + NM_004360 CDH1 0 . . . 3.11 75.53 22 7.28 Yes 3 0.07 No 0 0 No -21 0.89 Yes 44 72.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68512639 + NM_133509 RAD51B 0 . . . 2.48 80.95 23 4.8 No 71 0.06 No 0 0 No -37 0.84 Yes 50 39.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59848778 - NM_032043 BRIP1 0 . . . 2.67 74.74 24 5 No 7 0.51 No 0 0 No -26 0.87 Yes 51 84.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59930629 - NM_032043 BRIP1 0 . . . 8.77 90.56 52 9 Yes 72 1.46 Yes 0 0 No -51 0.81 Yes 42 58.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68947370 + NM_133509 RAD51B 0 . . . 9.11 79.59 23 6.31 Yes 24 -1.16 No 0 0 No -22 0.8 Yes 36 55.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59833796 - NM_032043 BRIP1 0 . . . 3.82 64.89 36 7.42 Yes 34 0.41 No 0 0 No -35 0.93 Yes 28 37.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7591090 - NM_000546 TP53 0 . . . 4.13 77.26 14 3.56 No 69 -3.23 No 0 0 No -19 0.62 No 30 56.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68337990 + NM_133509 RAD51B 0 . . . 7.78 75.13 23 5.68 Yes 61 -4.85 No 0 0 No -33 0.5 No 42 44.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68518917 + NM_133509 RAD51B 0 . . . 1.28 78.25 37 7.72 Yes 74 -5.46 No 0 0 No -36 0.5 No 32 72.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48029984 + NM_000179 MSH6 0 . . . 2.65 85.41 23 3.71 No 52 0.23 No 0 0 No -22 0.88 Yes 50 92.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68999128 + NM_133509 RAD51B 0 . . . 3.46 70.25 18 4.36 No 74 -5.69 No 0 0 No -33 0.62 No 44 47.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104171995 - NM_001100119 XRCC3 0 . . . 0.79 64.51 27 6.07 Yes 33 1.23 Yes 0 0 No -26 0.8 Yes 52 71.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32899315 + NM_000059 BRCA2 0 . . . 6.07 74.38 22 4.9 No 2 0.91 Yes 0 0 No -21 0.94 Yes 36 60.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89706841 + NM_000314 PTEN 0 . . . 2.02 68.26 24 4.62 No 18 0.64 No 0 0 No -17 0.63 No 40 50.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94218027 - NM_005591 MRE11 0 . . . 5.91 88.1 22 5.29 No -2 0.66 No 0 0 No -21 0.89 Yes 45 64.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47632840 + NM_000251 MSH2 0 . . . 3.85 67.88 32 6.08 Yes 27 0.77 No 0 0 No -31 0.87 Yes 27 88.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84383437 - NM_139076 FAM175A 0 . . . 2.51 79.88 18 4.69 No 57 1.23 Yes 0 0 No -17 0.78 Yes 46 97.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68573073 + NM_133509 RAD51B 0 . . . 1.55 50.67 21 5.1 No 21 0.7 No 0 0 No -20 0.71 Yes 41 68.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108147189 + NM_000051 ATM 0 . . . 5.35 81.14 24 5.48 No 74 0.8 Yes 0 0 No -23 0.66 No 47 73.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90997037 - NM_002485 NBN 0 . . . 0.3 74.54 26 5.22 No 1 1.63 Yes 0 0 No -26 0.4 No 57 44.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48031344 + NM_000179 MSH6 0 . . . 3.93 81.86 26 5.92 Yes 72 0.73 No 0 0 No -25 0.73 Yes 49 90.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56813463 + NM_058216 RAD51C 0 . . . 5.42 83.98 18 5.47 No 10 0.45 No 0 0 No -28 0.4 No 48 90.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215626599 - NM_000465 BARD1 0 . . . 0.77 0 21 6.52 Yes 24 1.33 Yes 0 0 No -23 0.41 No 34 75.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68964980 + NM_133509 RAD51B 0 . . . 4.33 74.24 18 4.55 No 16 -0.8 No 0 0 No -18 0.47 No 45 50.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215645072 - NM_000465 BARD1 0 . . . 6.66 76.65 41 6.22 Yes 31 -3.26 No 0 0 No -35 0.6 No 47 83.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69001416 + NM_133509 RAD51B 0 . . . 0.19 65.22 26 5.38 No 66 -5.22 No 0 0 No -25 0.92 Yes 44 63.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89681210 + NM_000314 PTEN 0 . . . 4.7 86.61 19 5.45 No 7 1.16 Yes 0 0 No -30 0.42 No 51 82.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75514240 - NM_001040108 MLH3 0 . . . 0.12 61.1 22 5.2 No 70 -2.55 No 0 0 No -21 0.73 Yes 22 87.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47773290 + NM_000251 MSH2 0 . . . 0.91 72.93 24 5.26 No 58 1.7 Yes 0 0 No -24 0.66 No 55 41.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68431760 + NM_133509 RAD51B 0 . . . 2.39 73.31 27 4.66 No 30 0.31 No 0 0 No -26 0.55 No 37 90.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68909179 + NM_133509 RAD51B 0 . . . 10.8 86.44 36 5.82 Yes 60 0.76 No 0 0 No -35 0.62 No 32 74.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37077394 + NM_000249 MLH1 0 . . . 3.14 86.58 37 6.46 Yes 60 0.46 No 0 0 No -29 0.34 No 46 65.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89651534 + NM_000314 PTEN 0 . . . 1.1 73.84 20 7.14 Yes 67 -4.95 No 0 0 No -19 0.63 No 43 52.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47695250 + NM_000251 MSH2 0 . . . 7.08 82.25 23 6.24 Yes 60 1.09 Yes 0 0 No -22 0.5 No 43 65.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68288305 + NM_133509 RAD51B 0 . . . 0.73 0 20 5.1 No 7 1.14 Yes 0 0 No -22 0.36 No 38 69.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47634375 + NM_000251 MSH2 0 . . . 2.3 69.72 22 4.7 No 0 0.15 No 0 0 No -22 0.44 No 51 39.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215600772 - NM_000465 BARD1 0 . . . 0.44 65.05 55 7.22 Yes 71 0.33 No 0 0 No -26 0.24 No 49 36.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152345608 - NM_005431 XRCC2 0 . . . 3.8 76.09 22 5.49 No 62 0.26 No 0 0 No -21 0.86 Yes 44 59.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37039750 + NM_000249 MLH1 0 . . . 3.19 75.08 21 5.31 No 61 -4.47 No 0 0 No -23 0.82 Yes 44 68.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68325560 + NM_133509 RAD51B 0 . . . 4.16 83.92 32 7.92 Yes 39 0.68 No 0 0 No -31 0.88 Yes 45 65.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6010589 - NM_000535 PMS2 0 . . . 4.42 81.79 16 6.86 Yes 35 -2.01 No 0 0 No -26 0.43 No 43 46.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68861289 + NM_004360 CDH1 0 . . . 10.3 90.01 28 5.12 No 76 -3.94 No 0 0 No -27 0.75 Yes 42 68.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68656077 + NM_133509 RAD51B 0 . . . 2.09 79.46 18 5.46 No 20 0.13 No 0 0 No -17 0.56 No 43 94.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59762747 - NM_032043 BRIP1 0 . . . 7.58 84.11 20 5.05 No 32 1.1 Yes 0 0 No -26 0.54 No 46 56.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108104048 + NM_000051 ATM 0 . . . 5.3 75.41 26 4.85 No 6 1.43 Yes 0 0 No -25 0.82 Yes 52 92.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69118825 + NM_133509 RAD51B 0 . . . 3.84 80.86 34 7.51 Yes 45 0.75 No 0 0 No -28 0.7 Yes 49 78.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215621336 - NM_000465 BARD1 0 . . . 2.83 75.32 32 5.63 Yes 19 0.79 Yes 0 0 No -31 0.73 Yes 39 81.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69087283 + NM_133509 RAD51B 0 . . . 3.98 70.74 23 5.74 Yes 31 2.38 Yes 0 0 No -22 0.52 No 49 50.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215641630 - NM_000465 BARD1 0 . . . 6.82 85.95 25 4.79 No 29 1.38 Yes 0 0 No -18 0.4 No 39 79.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41252264 - NM_007294 BRCA1 0 . . . 1.93 72.4 19 5 No 74 -6.3 No 0 0 No -30 0.79 Yes 51 31.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69002966 + NM_133509 RAD51B 0 . . . 2.34 0 32 5.99 Yes 62 1 Yes 0 0 No -31 0.67 Yes 50 90.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68869210 + NM_133509 RAD51B 0 . . . 2.13 0 14 6.16 Yes 8 1.52 Yes 0 0 No -36 0.76 Yes 50 37.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68833080 + NM_004360 CDH1 0 . . . 0.17 0 28 5.2 No 51 -3.49 No 0 0 No -28 0.35 No 42 30.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1218671 + NM_000455 STK11 0 . . . 2.51 69.12 22 4.44 No 13 -1.77 No 0 0 No -28 0.5 No 45 82.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89629943 + NM_000314 PTEN 0 . . . 3.73 79.82 23 4.78 No 64 0.45 No 0 0 No -22 0.9 Yes 40 52.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68805131 + NM_004360 CDH1 0 . . . 9.55 90.65 33 6.14 Yes 10 1.51 Yes 0 0 No -24 0.79 Yes 48 94.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47780587 + NM_000251 MSH2 0 . . . 4.99 84 24 4.32 No 2 1.31 Yes 0 0 No -23 0.75 Yes 15 29.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89637662 + NM_000314 PTEN 0 . . . 0.56 82.81 20 7.13 Yes 59 0.56 No 0 0 No -30 0.59 No 49 92.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84382174 - NM_139076 FAM175A 0 . . . 0.27 66.92 17 4.47 No 2 1.22 Yes 0 0 No -27 0.69 Yes 42 86.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108233847 + NM_000051 ATM 0 . . . 0.01 76.82 26 5.39 No 68 1.22 Yes 0 0 No -25 0.67 Yes 53 72.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131969851 + NM_005732 RAD50 0 . . . 1.35 69.74 36 6.16 Yes 50 0.64 No 0 0 No -21 0.5 No 47 48.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75494659 - NM_001040108 MLH3 0 . . . 3.45 74.41 21 5.09 No -4 0.45 No 0 0 No -20 0.5 No 27 45.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23636553 - NM_024675 PALB2 0 . . . 0.78 84.22 45 8.37 Yes 33 0.62 No 0 0 No -44 0.77 Yes 51 43.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47688840 + NM_000251 MSH2 0 . . . 1.23 0 36 5.87 Yes 45 1 Yes 0 0 No -25 0.59 No 56 26.44 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131897776 + NM_005732 RAD50 0 . . . 0.71 0 29 4.92 No 69 0.43 No 0 0 No -23 0.5 No 59 40.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105199406 + NM_021930 RINT1 0 . . . 0.11 54.25 22 5.29 No 68 -3.31 No 0 0 No -21 0.63 No 22 33.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41018283 + NM_001164269 RAD51 0 . . . 1.57 74.22 45 7.94 Yes 15 1.04 Yes 0 0 No -37 0.57 No 48 31.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47741489 + NM_000251 MSH2 0 . . . 2.35 78.73 30 6.46 Yes 22 0.07 No 0 0 No -22 0.75 Yes 51 89.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68419212 + NM_133509 RAD51B 0 . . . 4.22 70.28 39 5.79 Yes 48 0.08 No 0 0 No -36 0.44 No 53 59.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47718272 + NM_000251 MSH2 0 . . . 3.61 84.17 20 5.91 Yes 14 -0.19 No 0 0 No -22 0.38 No 11 26.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68852969 + NM_004360 CDH1 0 . . . 1.11 74.76 50 8.15 Yes 33 1.02 Yes 0 0 No -26 0.63 No 25 55.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108174496 + NM_000051 ATM 0 . . . 2.02 75.08 23 4.97 No 35 0.34 No 0 0 No -22 0.71 Yes 49 57.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68663796 + NM_133509 RAD51B 0 . . . 6.92 88.23 17 5.57 Yes 56 1.43 Yes 0 0 No -25 0.67 Yes 39 89.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68617045 + NM_133509 RAD51B 0 . . . 1.32 0 15 4.58 No 71 0.98 Yes 0 0 No -21 0.52 No 38 75.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69132455 + NM_133509 RAD51B 0 . . . 0.29 64.33 42 6.36 Yes 55 -1.87 No 0 0 No -41 0.38 No 54 50.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68741571 + NM_133509 RAD51B 0 . . . 1.89 73.16 17 5.57 Yes 64 1.37 Yes 0 0 No -16 0.72 Yes 38 61.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89718741 + NM_000314 PTEN 0 . . . 2.08 71.42 16 5.33 No 38 0.58 No 0 0 No -45 0.22 No 52 41.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68735453 + NM_133509 RAD51B 0 . . . 2.77 73.55 15 4.36 No 20 0.34 No 0 0 No -14 0.82 Yes 17 60.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89719414 + NM_000314 PTEN 0 . . . 8.03 77.86 21 5.2 No 45 0.43 No 0 0 No -20 0.42 No 46 88.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89642581 + NM_000314 PTEN 0 . . . 5.32 75.12 38 7.23 Yes 14 1.18 Yes 0 0 No -32 0.74 Yes 44 61.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89718338 + NM_000314 PTEN 0 . . . 2.58 69.85 24 5.11 No 7 0.21 No 0 0 No -24 0.78 Yes 51 83.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68560020 + NM_133509 RAD51B 0 . . . 5.6 74.76 25 4.99 No 67 -1.08 No 0 0 No -24 0.75 Yes 46 84.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89651036 + NM_000314 PTEN 0 . . . 2.72 75.9 24 6 Yes 53 1.78 Yes 0 0 No -23 0.94 Yes 49 63.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47653094 + NM_000251 MSH2 0 . . . 4.71 84.22 22 7.29 Yes 33 1.23 Yes 0 0 No -21 0.61 No 25 55.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68328033 + NM_133509 RAD51B 0 . . . 8.53 85.88 35 5.05 No 0 1 Yes 0 0 No -34 0.63 No 43 92.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56770946 + NM_058216 RAD51C 0 . . . 3.72 72.82 16 4.96 No 73 0.21 No 0 0 No -26 0.72 Yes 45 85.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68393104 + NM_133509 RAD51B 0 . . . 1.73 62.67 13 4.9 No -4 0.45 No 0 0 No -20 0.17 No 49 28.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69022454 + NM_133509 RAD51B 0 . . . 0.11 0 15 5.29 No 47 1.1 Yes 0 0 No -20 0.52 No 11 53.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33441608 - NM_002878 RAD51D 0 . . . 0.96 81.44 51 9.06 Yes 8 0.47 No 0 0 No -50 0.86 Yes 50 92.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68569493 + NM_133509 RAD51B 0 . . . 3.92 72 27 5.2 No 63 0.11 No 0 0 No -54 0.92 Yes 36 42.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68877968 + NM_133509 RAD51B 0 . . . 4.19 73.5 18 4.9 No 58 0.97 Yes 0 0 No -17 0.57 No 46 85.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59875400 - NM_032043 BRIP1 0 . . . 0.15 0 25 5.8 Yes 45 0.1 No 0 0 No -30 0.39 No 34 41.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94203994 - NM_005591 MRE11 0 . . . 1.74 70.12 15 5.39 No 73 1.32 Yes 0 0 No -30 0.56 No 41 70.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152360382 - NM_005431 XRCC2 0 . . . 4.62 0 23 7.68 Yes 74 0.82 Yes 0 0 No -22 0.88 Yes 37 85.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94217522 - NM_005591 MRE11 0 . . . 2.32 77.32 25 5.39 No 36 0.29 No 0 0 No -24 0.77 Yes 46 92.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68982889 + NM_133509 RAD51B 0 . . . 2.35 83.81 17 4.8 No 36 0.25 No 0 0 No -20 0.91 Yes 17 44.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75488928 - NM_001040108 MLH3 0 . . . 4.91 90.11 31 6.46 Yes 73 -5.64 No 0 0 No -30 0.59 No 49 73.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89685391 + NM_000314 PTEN 0 . . . 1.74 76.21 25 7.33 Yes 62 0.26 No 0 0 No -24 0.88 Yes 47 82.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68857534 + NM_133509 RAD51B 0 . . . 4.46 69.91 38 6.31 Yes 14 0.15 No 0 0 No -37 0.73 Yes 44 93.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68839084 + NM_133509 RAD51B 0 . . . 4.85 88.95 23 4.28 No 71 0.11 No 0 0 No -22 0.81 Yes 49 68.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69090934 + NM_133509 RAD51B 0 . . . 3.74 70.53 68 9.41 Yes 28 -3.01 No 0 0 No -25 0.77 Yes 48 70.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68450147 + NM_133509 RAD51B 0 . . . 5.64 72.57 40 6.24 Yes 34 -2.11 No 0 0 No -29 0.38 No 43 73.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68610720 + NM_133509 RAD51B 0 . . . 0.76 64.64 32 6.08 Yes 19 1.06 Yes 0 0 No -31 0.54 No 39 85.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48010827 + NM_000179 MSH6 0 . . . 0.34 0 26 5.46 No 40 -3.18 No 0 0 No -25 0.47 No 42 37.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59834030 - NM_032043 BRIP1 0 . . . 4.06 80.41 43 7.44 Yes 67 -4.62 No 0 0 No -45 0.47 No 50 36.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59822346 - NM_032043 BRIP1 0 . . . 2 79.37 16 5.1 No -2 0.35 No 0 0 No -20 0.59 No 49 92.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23630502 - NM_024675 PALB2 0 . . . 8.14 93.46 50 6.75 Yes 7 1.34 Yes 0 0 No -21 0.54 No 51 75.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59912565 - NM_032043 BRIP1 0 . . . 3.83 74.94 60 7.68 Yes 5 -2.26 No 0 0 No -41 0.67 Yes 47 67.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68339455 + NM_133509 RAD51B 0 . . . 1.75 67.66 31 5.4 No 59 -4.44 No 0 0 No -28 0.39 No 43 29.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108132132 + NM_000051 ATM 0 . . . 0.94 77.09 13 4.55 No 71 2.3 Yes 0 0 No -25 0.76 Yes 48 54.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108100477 + NM_000051 ATM 0 . . . 0.05 63.02 23 5.72 Yes 28 0.62 No 0 0 No -33 0.63 No 49 44.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41272456 - NM_007294 BRCA1 0 . . . 2.39 64.35 32 5.57 Yes 24 0.55 No 0 0 No -31 0.61 No 34 72.66 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29138212 - NM_001005735 CHEK2 0 . . . 0.39 67.45 12 5.1 No 61 -2.42 No 0 0 No -11 0.37 No 26 41.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90991602 - NM_002485 NBN 0 . . . 0.28 62.51 15 3.69 No 18 0.52 No 0 0 No -22 0.61 No 40 88.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41213868 - NM_007294 BRCA1 0 . . . 0.85 74.47 20 5.1 No 30 0.4 No 0 0 No -56 0.33 No 54 83.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131928293 + NM_005732 RAD50 0 . . . 1.68 68.3 21 5.2 No 30 1.42 Yes 0 0 No -58 0.44 No 48 53.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89703838 + NM_000314 PTEN 0 . . . 1.06 67.63 26 5.1 No 61 -4.78 No 0 0 No -25 0.51 No 44 48.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75512597 - NM_001040108 MLH3 0 . . . 0.13 0 27 4.21 No 52 0.78 Yes 0 0 No -27 0.19 No 50 30.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48007629 + NM_000179 MSH6 0 . . . 0.79 80.8 40 9.88 Yes 44 -2.79 No 0 0 No -39 0.96 Yes 45 50.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29082512 - NM_001005735 CHEK2 0 . . . 6.36 74.02 31 5.46 No 43 1.59 Yes 0 0 No -21 0.52 No 35 79.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37062292 + NM_000249 MLH1 0 . . . 5.05 83.65 40 5.22 No 28 -0.6 No 0 0 No -20 0.89 Yes 46 57.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41024508 + NM_001164269 RAD51 0 . . . 1.55 68.57 21 4.69 No 59 0.47 No 0 0 No -20 0.92 Yes 49 28.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105195713 + NM_021930 RINT1 0 . . . 0.53 60.36 74 8.08 Yes 19 0.32 No 0 0 No -36 0.73 Yes 34 32.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41262577 - NM_007294 BRCA1 0 . . . 6.52 84.94 21 4.47 No 3 1.02 Yes 0 0 No -26 0.7 Yes 16 57.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68790905 + NM_133509 RAD51B 0 . . . 1.34 63.47 28 5.39 No 64 0.31 No 0 0 No -27 0.67 Yes 44 97.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56772425 + NM_058216 RAD51C 0 . . . 2.19 81.62 15 4.58 No 75 -6.58 No 0 0 No -18 0.73 Yes 48 63.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59880957 - NM_032043 BRIP1 0 . . . 3.59 84.79 58 8.82 Yes 2 1.34 Yes 0 0 No -31 0.36 No 44 74.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190657771 + NM_000534 PMS1 0 . . . 6.24 82.31 18 5.33 No 3 0.46 No 0 0 No -17 0.62 No 55 59.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33427145 - NM_002878 RAD51D 0 . . . 5.38 73.19 31 6.07 Yes 53 1.2 Yes 0 0 No -30 0.74 Yes 32 89.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37080946 + NM_000249 MLH1 0 . . . 0.62 64.2 35 6.31 Yes 55 1.29 Yes 0 0 No -27 0.87 Yes 34 52.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152366164 - NM_005431 XRCC2 0 . . . 2.37 0 31 6.49 Yes 4 1.1 Yes 0 0 No -30 0.82 Yes 35 57.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37062130 + NM_000249 MLH1 0 . . . 9.12 80.89 13 5.83 Yes 39 1 Yes 0 0 No -29 0.38 No 45 69.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37092379 + NM_000249 MLH1 0 . . . 2.49 0 26 5 No 36 0.64 No 0 0 No -25 0.7 Yes 34 85.52 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68539430 + NM_133509 RAD51B 0 . . . 2.62 0 19 4.75 No 11 0.65 No 0 0 No -44 0.43 No 47 55.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68652575 + NM_133509 RAD51B 0 . . . 6.18 73.06 33 5.83 Yes 42 1.73 Yes 0 0 No -32 0.44 No 43 55.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215617584 - NM_000465 BARD1 0 . . . 0.99 65.73 34 5.98 Yes 61 0.95 Yes 0 0 No -31 0.68 Yes 41 78.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6017749 - NM_000535 PMS2 0 . . . 1.64 83.13 16 5.73 Yes 6 1.13 Yes 0 0 No -22 0.58 No 44 88.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59761377 - NM_032043 BRIP1 0 . . . 4.42 76.95 73 8.61 Yes 2 0.59 No 0 0 No -36 0.5 No 48 68.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32969219 + NM_000059 BRCA2 0 . . . 1.53 76.42 39 5.03 No 59 -5.36 No 0 0 No -34 0.84 Yes 41 71.59 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59848506 - NM_032043 BRIP1 0 . . . 6.53 78.88 14 4.47 No 16 1.18 Yes 0 0 No -28 0.28 No 42 71.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47629389 + NM_000251 MSH2 0 . . . 7.04 79.08 19 5.47 No 15 1.37 Yes 0 0 No -29 0.44 No 43 86.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68783992 + NM_004360 CDH1 0 . . . 0.34 80.49 28 7.07 Yes 32 0.57 No 0 0 No -27 0.85 Yes 26 82.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47718591 + NM_000251 MSH2 0 . . . 1.31 60.41 19 4.8 No 46 0.39 No 0 0 No -46 0.43 No 45 42.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32891707 + NM_000059 BRCA2 0 . . . 3.2 67.92 19 5 No 31 0.16 No 0 0 No -18 0.62 No 35 66.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68510041 + NM_133509 RAD51B 0 . . . 6.43 75.62 10 4.69 No 8 -1.83 No 0 0 No -21 0.78 Yes 37 65.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68911314 + NM_133509 RAD51B 0 . . . 3.99 76.36 18 5.68 Yes 42 -4.73 No 0 0 No -49 0.47 No 47 89.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68812357 + NM_004360 CDH1 0 . . . 0.44 0 20 4.67 No 75 0.48 No 0 0 No -17 0.49 No 46 58.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21985992 - NM_000077 CDKN2A 0 . . . 1.73 77.17 22 3.48 No 53 -4.22 No 0 0 No -25 0.89 Yes 50 65.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69110284 + NM_133509 RAD51B 0 . . . 7.44 86.53 15 4.36 No 11 1.23 Yes 0 0 No -14 0.35 No 47 70.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59831100 - NM_032043 BRIP1 0 . . . 0.02 68.19 30 5.38 No 17 -2.06 No 0 0 No -29 0.88 Yes 20 34.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89660688 + NM_000314 PTEN 0 . . . 5.22 71.48 19 4.8 No 48 0.28 No 0 0 No -21 0.63 No 49 54.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32969740 + NM_000059 BRCA2 0 . . . 1.94 70.56 31 6.34 Yes 8 0.09 No 0 0 No -30 0.78 Yes 50 52.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29114677 - NM_001005735 CHEK2 0 . . . 0.11 78.8 30 8.45 Yes 33 1.15 Yes 0 0 No -29 0.8 Yes 25 70.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190681580 + NM_000534 PMS1 0 . . . 2.6 75.98 38 7.9 Yes 49 0.68 No 0 0 No -37 0.77 Yes 45 77.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68616567 + NM_133509 RAD51B 0 . . . 0.88 73.84 14 5.28 No 66 -3.63 No 0 0 No -24 0.59 No 44 26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47750391 + NM_000251 MSH2 0 . . . 0.74 68.11 52 6.87 Yes 57 0.35 No 0 0 No -26 0.68 Yes 50 37.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69111334 + NM_133509 RAD51B 0 . . . 4.24 77.15 21 6.11 Yes 22 1.25 Yes 0 0 No -20 0.84 Yes 36 75.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94169111 - NM_005591 MRE11 0 . . . 7.89 91.45 29 5.38 No 18 1.26 Yes 0 0 No -24 0.46 No 44 87.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89657580 + NM_000314 PTEN 0 . . . 3.59 73.15 31 5.56 Yes 10 1.1 Yes 0 0 No -58 0.69 Yes 35 48.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89693443 + NM_000314 PTEN 0 . . . 4.47 74.79 22 4.06 No 18 1.8 Yes 0 0 No -21 0.96 Yes 40 93.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75507909 - NM_001040108 MLH3 0 . . . 2.86 68.43 14 4.47 No 60 1.04 Yes 0 0 No -13 0.34 No 52 83.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68408733 + NM_133509 RAD51B 0 . . . 4.03 72.12 31 5.47 No 56 0.58 No 0 0 No -25 0.5 No 38 59.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89693054 + NM_000314 PTEN 0 . . . 1.77 69.72 19 4.8 No 19 1.19 Yes 0 0 No -18 0.61 No 27 65.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33446130 - NM_002878 RAD51D 0 . . . 6.42 78.49 19 5.46 No 11 -0.43 No 0 0 No -18 0.38 No 47 92.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89671530 + NM_000314 PTEN 0 . . . 5.01 73.09 26 4.39 No 31 0.71 No 0 0 No -25 0.57 No 26 68.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56807750 + NM_058216 RAD51C 0 . . . 2.03 75.25 24 5.83 Yes 47 1.4 Yes 0 0 No -23 0.75 Yes 11 93.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90990312 - NM_002485 NBN 0 . . . 0.67 70.8 15 4.58 No 45 1.01 Yes 0 0 No -45 0.58 No 48 51.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68853209 + NM_133509 RAD51B 0 . . . 1.81 82.37 26 4.91 No 59 1.38 Yes 0 0 No -26 0.5 No 43 64.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108110067 + NM_000051 ATM 0 . . . 2.92 70.83 22 5 No 40 0.87 Yes 0 0 No -26 0.66 Yes 42 84.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23621597 - NM_024675 PALB2 0 . . . 6.35 71.9 40 7.29 Yes 16 0.5 No 0 0 No -39 0.86 Yes 42 74.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23644102 - NM_024675 PALB2 0 . . . 2.56 71.45 25 5.39 No 45 -3.79 No 0 0 No -24 0.42 No 48 59.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69060529 + NM_133509 RAD51B 0 . . . 4.17 75.96 11 4.11 No 4 0.2 No 0 0 No -21 0.84 Yes 39 75.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41260843 - NM_007294 BRCA1 0 . . . 2.24 80.12 16 4.47 No 7 1.16 Yes 0 0 No -15 0.63 No 51 81.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68657728 + NM_133509 RAD51B 0 . . . 0.97 62.52 26 3.79 No 39 0.16 No 0 0 No -25 0.74 Yes 51 59.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68930363 + NM_133509 RAD51B 0 . . . 3.24 70.56 21 5.1 No 73 -4.42 No 0 0 No -20 0.8 Yes 46 45.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131915920 + NM_005732 RAD50 0 . . . 2.87 76.5 33 5.51 No 43 1.22 Yes 0 0 No -26 0.43 No 53 48.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215608921 - NM_000465 BARD1 0 . . . 5.19 79.1 69 9.72 Yes 13 0.99 Yes 0 0 No -27 0.52 No 45 86.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59757828 - NM_032043 BRIP1 0 . . . 1.55 67.7 26 5.08 No 74 -2.12 No 0 0 No -25 0.5 No 62 19.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215594723 - NM_000465 BARD1 0 . . . 0.03 64.65 20 4.92 No 41 -3.79 No 0 0 No -28 0.73 Yes 51 92.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68700178 + NM_133509 RAD51B 0 . . . 0.57 67.21 16 4.58 No 68 1.25 Yes 0 0 No -15 0.26 No 29 93.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59891713 - NM_032043 BRIP1 0 . . . 0.41 64.67 31 4.89 No 7 1.46 Yes 0 0 No -30 0.51 No 21 82.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68348088 + NM_133509 RAD51B 0 . . . 6.59 68.2 20 5.57 Yes 22 0.41 No 0 0 No -19 0.7 Yes 26 52.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47729928 + NM_000251 MSH2 0 . . . 5.08 63.72 20 4.8 No 2 0.13 No 0 0 No -19 0.94 Yes 52 73.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68720730 + NM_133509 RAD51B 0 . . . 4.65 78.7 17 6.71 Yes 23 1.33 Yes 0 0 No -16 0.76 Yes 35 77.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32906621 + NM_000059 BRCA2 0 . . . 1.56 74.57 39 7.34 Yes 54 -2.33 No 0 0 No -23 0.83 Yes 48 36.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94207755 - NM_005591 MRE11 0 . . . 6.53 72.31 19 5 No 10 0.7 No 0 0 No -18 0.49 No 42 87.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68935661 + NM_133509 RAD51B 0 . . . 0.05 78.22 15 4.58 No 42 0.89 Yes 0 0 No -55 0.76 Yes 49 21.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6018580 - NM_000535 PMS2 0 . . . 2.06 67.73 29 7.35 Yes 32 0.68 No 0 0 No -28 0.95 Yes 40 50.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94189941 - NM_005591 MRE11 0 . . . 3.08 75.16 18 4.69 No 49 -3.43 No 0 0 No -17 0.87 Yes 45 86.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47656330 + NM_000251 MSH2 0 . . . 4.02 80.12 32 5.69 Yes 9 1.09 Yes 0 0 No -26 0.94 Yes 49 84.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68871178 + NM_133509 RAD51B 0 . . . 3.66 77.25 33 4.69 No 5 0.86 Yes 0 0 No -32 0.75 Yes 49 45.6 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68491481 + NM_133509 RAD51B 0 . . . 0.47 0 34 7.17 Yes 52 0.98 Yes 0 0 No -33 0.7 Yes 58 45.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68894903 + NM_133509 RAD51B 0 . . . 2.57 78.59 18 5.72 Yes 29 0.15 No 0 0 No -26 0.76 Yes 50 51.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152351063 - NM_005431 XRCC2 0 . . . 6.24 82.31 24 7.02 Yes 58 1.02 Yes 0 0 No -23 0.78 Yes 55 51.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68797737 + NM_004360 CDH1 0 . . . 0.33 67 27 4.01 No 43 -4.53 No 0 0 No -26 0.77 Yes 44 36.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68830193 + NM_133509 RAD51B 0 . . . 0.4 0 30 5.66 Yes 39 0.45 No 0 0 No -21 0.72 Yes 33 69.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41273227 - NM_007294 BRCA1 0 . . . 5.2 85.02 35 5.63 Yes 5 1.23 Yes 0 0 No -34 0.38 No 53 70.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90959569 - NM_002485 NBN 0 . . . 3.04 60.05 27 5.1 No 56 0.73 No 0 0 No -26 0.9 Yes 46 49.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131892865 + NM_005732 RAD50 0 . . . 7.39 84.31 20 5.44 No NA NA NA 0 0 No -49 0.45 No 34 96.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68299224 + NM_133509 RAD51B 0 . . . 6.99 84.29 22 5.4 No 36 1.2 Yes 0 0 No -22 0.58 No 50 51.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68772906 + NM_133509 RAD51B 0 . . . 6.23 75.33 28 5.48 No 63 0.77 Yes 0 0 No -27 0.8 Yes 44 67.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108220608 + NM_000051 ATM 0 . . . 1.68 0 13 4.8 No 69 -5.24 No 0 0 No -20 0.68 Yes 54 71.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89718550 + NM_000314 PTEN 0 . . . 4.82 73.95 24 5.48 No 0 0.85 Yes 0 0 No -23 0.55 No 38 80.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68314853 + NM_133509 RAD51B 0 . . . 2.36 86.71 21 4.95 No 33 1.28 Yes 0 0 No -20 0.75 Yes 50 87.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68842889 + NM_004360 CDH1 0 . . . 1.56 68.32 32 6.48 Yes 1 1.3 Yes 0 0 No -35 0.63 No 41 63.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94185836 - NM_005591 MRE11 0 . . . 7.84 87.84 27 4.99 No 5 0.95 Yes 0 0 No -32 0.69 Yes 47 80.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68442127 + NM_133509 RAD51B 0 . . . 2.17 69.02 17 4.58 No 22 1.12 Yes 0 0 No -21 0.34 No 36 91.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131977246 + NM_005732 RAD50 0 . . . 0.32 0 14 4.47 No 13 -1.47 No 0 0 No -44 0.82 Yes 45 25.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131961041 + NM_005732 RAD50 0 . . . 2.89 68.34 32 6.56 Yes 21 1.7 Yes 0 0 No -29 0.56 No 37 71.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89657874 + NM_000314 PTEN 0 . . . 6.17 73.92 22 4.9 No 21 0.92 Yes 0 0 No -21 0.82 Yes 46 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108115197 + NM_000051 ATM 0 . . . 3.22 69.53 16 6.55 Yes 49 -3.17 No 0 0 No -24 0.49 No 41 53.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69119110 + NM_133509 RAD51B 0 . . . 1.53 0 23 5.12 No 47 1.95 Yes 0 0 No -28 0.55 No 42 49.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68949093 + NM_133509 RAD51B 0 . . . 9.63 78.21 27 7.68 Yes -1 0.87 Yes 0 0 No -26 0.88 Yes 46 72.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59913007 - NM_032043 BRIP1 0 . . . 5.48 78.04 40 6.2 Yes 52 0.51 No 0 0 No -24 0.59 No 44 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47763334 + NM_000251 MSH2 0 . . . 1.46 0 37 4.91 No 17 1.43 Yes 0 0 No -24 0.53 No 55 32.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59777895 - NM_032043 BRIP1 0 . . . 3.53 71.31 25 6.61 Yes 59 -5.01 No 0 0 No -24 0.67 Yes 47 88.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59851410 - NM_032043 BRIP1 0 . . . 1.22 67.5 26 5.1 No 11 0.35 No 0 0 No -52 0.87 Yes 44 58.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47646997 + NM_000251 MSH2 0 . . . 6.13 82.86 15 4.58 No 76 1.11 Yes 0 0 No -19 0.41 No 35 76.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68356294 + NM_133509 RAD51B 0 . . . 4.71 75.18 91 9.02 Yes 71 -5.37 No 0 0 No -47 0.33 No 43 25.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68833336 + NM_133509 RAD51B 0 . . . 6.05 79.21 17 5.69 Yes 41 0.89 Yes 0 0 No -23 0.35 No 47 84.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69120816 + NM_133509 RAD51B 0 . . . 0.87 79.69 14 4.15 No 0 0.4 No 0 0 No -25 0.49 No 58 22.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190677752 + NM_000534 PMS1 0 . . . 2.46 71.39 24 4.95 No 4 0.39 No 0 0 No -23 0.9 Yes 41 65.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47772685 + NM_000251 MSH2 0 . . . 6.57 83.74 27 5.39 No 1 0.89 Yes 0 0 No -26 0.57 No 38 92.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68750734 + NM_133509 RAD51B 0 . . . 3.23 65.35 26 4.21 No 11 0.39 No 0 0 No -20 0.55 No 43 67.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68670611 + NM_133509 RAD51B 0 . . . 7.83 86.08 20 6.32 Yes 28 2.09 Yes 0 0 No -20 0.37 No 30 78.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69117340 + NM_133509 RAD51B 0 . . . 2.01 78.69 30 5.74 Yes 66 0.61 No 0 0 No -27 0.67 Yes 49 84.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59790242 - NM_032043 BRIP1 0 . . . 2.7 77.63 23 5.39 No 29 0.47 No 0 0 No -22 0.88 Yes 23 48.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69124992 + NM_133509 RAD51B 0 . . . 0.91 76.91 25 5.17 No 62 0.08 No 0 0 No -22 0.76 Yes 42 50.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68814551 + NM_004360 CDH1 0 . . . 4.68 83.1 16 5.8 Yes 17 0.17 No 0 0 No -23 0.88 Yes 44 85.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69004250 + NM_133509 RAD51B 0 . . . 2.86 65.18 24 6.32 Yes 23 -2.14 No 0 0 No -23 0.85 Yes 60 43.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6031225 - NM_000535 PMS2 0 . . . 3.93 70.85 28 6.66 Yes 21 1.72 Yes 0 0 No -27 0.52 No 37 83.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84390977 - NM_139076 FAM175A 0 . . . 1.09 78.59 23 4.9 No 69 -3.36 No 0 0 No -22 0.66 Yes 48 57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1222385 + NM_000455 STK11 0 . . . 0.17 0 52 5.7 Yes NA NA NA 0 0 No -33 0.94 Yes 63 30.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108174104 + NM_000051 ATM 0 . . . 0.4 73.22 50 7.02 Yes 50 1.85 Yes 0 0 No -24 0.52 No 27 58.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69052429 + NM_133509 RAD51B 0 . . . 2.51 73.25 48 9.19 Yes -4 0.79 Yes 0 0 No -23 0.58 No 23 56.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47681852 + NM_000251 MSH2 0 . . . 4.4 75.24 39 7.62 Yes 27 1.52 Yes 0 0 No -41 0.67 Yes 31 71.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108138022 + NM_000051 ATM 0 . . . 1.88 68.76 23 5.39 No 14 0.4 No 0 0 No -28 0.37 No 41 68.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84395623 - NM_139076 FAM175A 0 . . . 7.11 81.42 25 9.22 Yes 19 0.85 Yes 0 0 No -24 0.83 Yes 39 51.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68397519 + NM_133509 RAD51B 0 . . . 7.56 85.65 24 5.57 Yes 17 0.57 No 0 0 No -23 0.89 Yes 41 90.52 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131969791 + NM_005732 RAD50 0 . . . 1.55 68.63 22 7.28 Yes 59 0.27 No 0 0 No -21 0.83 Yes 50 52.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131914760 + NM_005732 RAD50 0 . . . 1.41 68.37 23 4.96 No 52 0.03 No 0 0 No -20 0.45 No 43 73.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89717710 + NM_000314 PTEN 0 . . . 1.08 0 16 5.57 Yes -1 0.15 No 0 0 No -54 0.49 No 49 42.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29137428 - NM_001005735 CHEK2 0 . . . 1.58 67.78 20 5.74 Yes 70 -3.23 No 0 0 No -19 0.6 No 50 55.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131896717 + NM_005732 RAD50 0 . . . 3.24 76.21 49 8.04 Yes 67 1.01 Yes 0 0 No -48 0.63 No 48 70.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190677728 + NM_000534 PMS1 0 . . . 0.87 50.38 34 6.71 Yes 16 0.19 No 0 0 No -24 0.63 No 42 79.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215670041 - NM_000465 BARD1 0 . . . 7.58 83.26 22 5.23 No 14 1.1 Yes 0 0 No -21 0.78 Yes 44 79.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68663669 + NM_133509 RAD51B 0 . . . 0.08 59.73 31 5.35 No 72 0.33 No 0 0 No -25 0.7 Yes 57 52.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23632896 - NM_024675 PALB2 0 . . . 8.44 80.44 40 6.4 Yes 56 0.31 No 0 0 No -31 0.59 No 44 48.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131928759 + NM_005732 RAD50 0 . . . 3 68.41 20 5.57 Yes 49 1.07 Yes 0 0 No -19 0.66 No 39 44.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59906650 - NM_032043 BRIP1 0 . . . 2.86 63.87 20 4.66 No 49 1.62 Yes 0 0 No -20 0.72 Yes 42 41.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59895161 - NM_032043 BRIP1 0 . . . 0.33 67.98 19 5 No 4 0.41 No 0 0 No -18 0.54 No 26 92.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56806839 + NM_058216 RAD51C 0 . . . 4.33 75.11 22 4.69 No 9 0.77 Yes 0 0 No -24 0.83 Yes 44 56.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152360589 - NM_005431 XRCC2 0 . . . 1.45 82.75 16 5.29 No -3 0.02 No 0 0 No -21 0.62 No 48 30.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56783762 + NM_058216 RAD51C 0 . . . 1.78 76.63 39 5.09 No 61 -4.07 No 0 0 No -24 0.43 No 43 72.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68892805 + NM_133509 RAD51B 0 . . . 4.6 83.86 31 6.05 Yes NA NA NA 0 0 No -30 0.7 Yes 20 12.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94221009 - NM_005591 MRE11 0 . . . 0.28 58.82 35 7.07 Yes 62 2.14 Yes 0 0 No -34 0.93 Yes 40 61.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68855356 + NM_004360 CDH1 0 . . . 2.84 69.84 21 4.39 No 27 0.72 No 0 0 No -20 0.57 No 41 82.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47719974 + NM_000251 MSH2 0 . . . 1.58 73.15 24 4.8 No 47 0.9 Yes 0 0 No -23 0.78 Yes 40 48.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37083996 + NM_000249 MLH1 0 . . . 2.64 83.34 28 5.64 Yes 72 0.4 No 0 0 No -23 0.64 No 49 86.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215612568 - NM_000465 BARD1 0 . . . 3.97 75.24 17 4.8 No 59 1.91 Yes 0 0 No -44 0.58 No 16 59.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59882145 - NM_032043 BRIP1 0 . . . 1.45 67.68 25 5.21 No -1 0.54 No 0 0 No -24 0.57 No 47 60.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52434878 - NM_004656 BAP1 0 . . . 0.51 74 16 5.06 No 47 -4.06 No 0 0 No -20 0.76 Yes 52 29.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89700403 + NM_000314 PTEN 0 . . . 0.36 59.2 20 3.57 No 71 1.45 Yes 0 0 No -25 0.94 Yes 28 76.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59826046 - NM_032043 BRIP1 0 . . . 3.09 71.82 21 4.69 No 48 1.39 Yes 0 0 No -20 0.89 Yes 22 77.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69123334 + NM_133509 RAD51B 0 . . . 5.93 72.91 21 5.33 No 50 -1.87 No 0 0 No -20 0.57 No 38 56.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69146845 + NM_133509 RAD51B 0 . . . 5.51 82.51 31 7.55 Yes 55 0.91 Yes 0 0 No -31 0.57 No 35 44.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41258741 - NM_007294 BRCA1 0 . . . 1.27 74.55 13 5.48 No 68 1.16 Yes 0 0 No -23 0.4 No 50 89.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56802950 + NM_058216 RAD51C 0 . . . 3.27 76.69 51 8.74 Yes 36 0.14 No 0 0 No -50 0.75 Yes 44 55.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68608641 + NM_133509 RAD51B 0 . . . 4.29 70.44 13 5.19 No 56 0.45 No 0 0 No -24 0.67 Yes 46 93.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59829046 - NM_032043 BRIP1 0 . . . 4.39 82.28 19 4.75 No 13 -1.6 No 0 0 No -23 0.73 Yes 46 50.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69116813 + NM_133509 RAD51B 0 . . . 1.43 56.75 19 5 No 10 1.37 Yes 0 0 No -18 0.41 No 48 64.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68682068 + NM_133509 RAD51B 0 . . . 3.3 75.54 23 4.84 No 57 0.9 Yes 0 0 No -22 0.65 No 46 71.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215612478 - NM_000465 BARD1 0 . . . 4.05 67.92 32 5.65 Yes 1 1.57 Yes 0 0 No -25 0.78 Yes 49 60.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94174791 - NM_005591 MRE11 0 . . . 0.47 0 37 5.95 Yes 1 0.49 No 0 0 No -27 0.37 No 57 22.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68450917 + NM_133509 RAD51B 0 . . . 5.89 71.34 17 4.04 No 21 1.05 Yes 0 0 No -21 0.72 Yes 37 71.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32965411 + NM_000059 BRCA2 0 . . . 0.52 63.47 41 5.74 Yes 3 -2.38 No 0 0 No -35 0.52 No 34 63.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89707005 + NM_000314 PTEN 0 . . . 3.4 66.78 28 5.24 No 17 1.03 Yes 0 0 No -24 0.38 No 41 81.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37051563 + NM_000249 MLH1 0 . . . 2.99 73.52 17 5.19 No 23 1.6 Yes 0 0 No -50 0.63 No 40 74.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41260278 - NM_007294 BRCA1 0 . . . 7.33 83.17 30 6 Yes 3 1.79 Yes 0 0 No -26 0.52 No 49 87.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7579185 - NM_000546 TP53 0 . . . 6.72 84.2 21 5.04 No 21 1.15 Yes 0 0 No -20 0.64 No 37 77.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68944774 + NM_133509 RAD51B 0 . . . 1.86 88.63 38 6.29 Yes 64 -5.58 No 0 0 No -37 0.78 Yes 51 91.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108122207 + NM_000051 ATM 0 . . . 1.51 56.29 15 5.48 No 25 0.29 No 0 0 No -28 0.58 No 37 65.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105179472 + NM_021930 RINT1 0 . . . 6.27 88.54 30 5.26 No 27 0.78 Yes 0 0 No -29 0.83 Yes 48 74.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37052226 + NM_000249 MLH1 0 . . . 4.02 80.12 28 5.38 No 18 1.52 Yes 0 0 No -27 0.7 Yes 40 95.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56774650 + NM_058216 RAD51C 0 . . . 0.72 74.68 28 5.38 No 4 0.31 No 0 0 No -27 0.43 No 54 62.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68501750 + NM_133509 RAD51B 0 . . . 3.33 84.89 30 6 Yes 53 1.02 Yes 0 0 No -29 0.78 Yes 43 64.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89687017 + NM_000314 PTEN 0 . . . 6.39 74.01 28 3.81 No 2 0.18 No 0 0 No -50 0.91 Yes 45 34.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68730921 + NM_133509 RAD51B 0 . . . 4.04 81.45 32 6.25 Yes 17 -2.53 No 0 0 No -28 0.91 Yes 41 72.27 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68515339 + NM_133509 RAD51B 0 . . . 1.31 76.62 18 4.8 No 31 1.22 Yes 0 0 No -17 0.55 No 46 55.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68513018 + NM_133509 RAD51B 0 . . . 5.31 84.62 21 3.83 No 54 1.33 Yes 0 0 No -25 0.65 No 52 83.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68947700 + NM_133509 RAD51B 0 . . . 5.78 68.73 20 3.76 No 5 1.22 Yes 0 0 No -43 0.52 No 35 73.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215589538 - NM_000465 BARD1 0 . . . 3.13 0 38 5.45 No 25 0.82 Yes 0 0 No -31 0.74 Yes 33 56.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94195823 - NM_005591 MRE11 0 . . . 7.41 94.98 21 4.27 No 25 0.6 No 0 0 No -20 0.71 Yes 33 74.68 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104171623 - NM_001100119 XRCC3 0 . . . 1.34 0 26 6.24 Yes 34 1.38 Yes 0 0 No -28 0.55 No 52 51.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68647557 + NM_133509 RAD51B 0 . . . 4.88 89.44 35 5.86 Yes 65 -3.43 No 0 0 No -22 0.85 Yes 49 46.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68796579 + NM_133509 RAD51B 0 . . . 2.41 69.01 15 4.2 No 61 1.07 Yes 0 0 No -22 0.61 No 49 23.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75478706 - NM_001040108 MLH3 0 . . . 5.96 0 26 5.24 No 54 0.35 No 0 0 No -25 0.88 Yes 39 73.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68792316 + NM_004360 CDH1 0 . . . 0.31 65.88 17 4.02 No 70 -5.27 No 0 0 No -24 0.56 No 44 35.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33432924 - NM_002878 RAD51D 0 . . . 4.33 74.62 13 5.07 No 74 1.33 Yes 0 0 No -24 0.29 No 47 90.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69134610 + NM_133509 RAD51B 0 . . . 3.68 74.38 30 6.13 Yes 33 1.04 Yes 0 0 No -29 0.65 No 55 41.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108093991 + NM_000051 ATM 0 . . . 10.26 86.17 15 5.28 No 21 -0.59 No 0 0 No -28 0.74 Yes 48 90.31 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59835637 - NM_032043 BRIP1 0 . . . 3.81 85.54 19 5.48 No 71 0.35 No 0 0 No -18 0.69 Yes 53 37.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190712909 + NM_000534 PMS1 0 . . . 6.23 89.9 23 5.1 No 71 -3.54 No 0 0 No -22 0.74 Yes 43 81.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59871791 - NM_032043 BRIP1 0 . . . 5.74 73.39 28 5.29 No 45 0.97 Yes 0 0 No -27 0.56 No 43 75.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75498052 - NM_001040108 MLH3 0 . . . 7.56 74.23 21 3.76 No 24 0.94 Yes 0 0 No -24 0.61 No 43 60.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68541329 + NM_133509 RAD51B 0 . . . 2.57 75.56 21 5.1 No 51 -3.84 No 0 0 No -20 0.81 Yes 48 49.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23641053 - NM_024675 PALB2 0 . . . 9.46 89.53 35 5.9 Yes 3 1.44 Yes 0 0 No -34 0.61 No 49 75.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190716437 + NM_000534 PMS1 0 . . . 4.5 73.71 29 5.6 Yes 13 1.49 Yes 0 0 No -28 0.73 Yes 45 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47713610 + NM_000251 MSH2 0 . . . 3.44 72.26 20 4.69 No -1 1.18 Yes 0 0 No -23 0.68 Yes 47 32.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59913363 - NM_032043 BRIP1 0 . . . 9.93 92.55 39 5.89 Yes 14 2.04 Yes 0 0 No -21 0.81 Yes 44 88.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59800010 - NM_032043 BRIP1 0 . . . 2.52 71.13 28 6.7 Yes 61 0.79 Yes 0 0 No -27 0.48 No 52 75.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68636861 + NM_133509 RAD51B 0 . . . 3.63 82.12 30 7.01 Yes 56 1.71 Yes 0 0 No -29 0.8 Yes 53 40.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68409858 + NM_133509 RAD51B 0 . . . 4.01 70.84 21 6.57 Yes 18 0.81 Yes 0 0 No -20 0.83 Yes 46 61.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68901769 + NM_133509 RAD51B 0 . . . 1.2 0 63 7.05 Yes 51 1.37 Yes 0 0 No -26 0.46 No 38 37.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68802033 + NM_004360 CDH1 0 . . . 1.56 77.08 38 6.32 Yes 6 0.98 Yes 0 0 No -33 0.86 Yes 52 75.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68775627 + NM_004360 CDH1 0 . . . 3.79 82.89 18 4.24 No 32 0.47 No 0 0 No -30 0.52 No 43 69.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33447812 - NM_002878 RAD51D 0 . . . 3.48 71.62 20 4.9 No -4 0.77 No 0 0 No -19 0.64 No 53 44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68755840 + NM_133509 RAD51B 0 . . . 2.42 62.08 20 4.8 No 69 -5.61 No 0 0 No -21 0.57 No 49 84.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68964845 + NM_133509 RAD51B 0 . . . 5.7 83.73 30 5.56 Yes 10 1.17 Yes 0 0 No -29 0.83 Yes 48 66.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32892384 + NM_000059 BRCA2 0 . . . 1.55 63.67 22 5 No 45 -3.94 No 0 0 No -21 0.64 No 56 19.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59821095 - NM_032043 BRIP1 0 . . . 2.39 76.63 22 4.46 No 67 -5.67 No 0 0 No -21 0.45 No 50 60.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90983942 - NM_002485 NBN 0 . . . 1.97 62.34 25 5.35 No 6 0.13 No 0 0 No -22 0.83 Yes 52 82.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68952009 + NM_133509 RAD51B 0 . . . 7.47 82.83 26 5 No -4 1.84 Yes 0 0 No -23 0.91 Yes 41 50.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59802026 - NM_032043 BRIP1 0 . . . 9.36 91.86 22 4.41 No -1 0.75 No 0 0 No -21 0.6 No 47 54.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68693550 + NM_133509 RAD51B 0 . . . 5.09 79.73 22 5.85 Yes -4 1.22 Yes 0 0 No -21 0.83 Yes 47 61.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1218794 + NM_000455 STK11 0 . . . 0.44 0 15 5.2 No 40 0.41 No 0 0 No -30 0.4 No 45 20.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37086078 + NM_000249 MLH1 0 . . . 1.19 77.18 22 4.91 No 53 0.67 No 0 0 No -25 0.82 Yes 49 69.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68963658 + NM_133509 RAD51B 0 . . . 8.04 85.65 10 4.69 No 65 0.87 Yes 0 0 No -37 0.42 No 45 42.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89720875 + NM_000314 PTEN 0 . . . 8.41 73.99 20 4.69 No 55 -3.9 No 0 0 No -19 0.58 No 44 84.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68505807 + NM_133509 RAD51B 0 . . . 4.09 72.96 26 5.45 No 13 1.14 Yes 0 0 No -25 0.59 No 45 89.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69032296 + NM_133509 RAD51B 0 . . . 0.73 67.89 31 6.5 Yes -3 0.08 No 0 0 No -25 0.73 Yes 45 77.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68804901 + NM_004360 CDH1 0 . . . 1.59 0 20 7.14 Yes 72 0.01 No 0 0 No -19 0.62 No 48 47.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89717947 + NM_000314 PTEN 0 . . . 3.6 77.4 17 6.3 Yes 1 0.66 No 0 0 No -25 0.66 No 46 74.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68878492 + NM_133509 RAD51B 0 . . . 1.52 65.56 29 6.29 Yes -1 1.18 Yes 0 0 No -17 0.66 No 47 80.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37084648 + NM_000249 MLH1 0 . . . 1.2 0 31 6.08 Yes 72 0.18 No 0 0 No -30 0.82 Yes 38 35.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68839328 + NM_004360 CDH1 0 . . . 0.04 0 23 5.06 No 41 1.21 Yes 0 0 No -32 0.31 No 47 54.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108159775 + NM_000051 ATM 0 . . . 2.09 81.53 25 5 No 40 1.57 Yes 0 0 No -24 0.84 Yes 44 52.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215674801 - NM_000465 BARD1 0 . . . 2.12 77.45 19 5.57 Yes 10 0.33 No 0 0 No -26 0.83 Yes 48 94.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59873163 - NM_032043 BRIP1 0 . . . 0.14 53.99 18 4.69 No 41 -4.52 No 0 0 No -54 0.25 No 54 27.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215600168 - NM_000465 BARD1 0 . . . 2.13 73.76 16 4.58 No 24 1 Yes 0 0 No -23 0.62 No 26 69.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89629110 + NM_000314 PTEN 0 . . . 0.52 65.52 18 4.35 No 42 1.1 Yes 0 0 No -23 0.25 No 41 64.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69099481 + NM_133509 RAD51B 0 . . . 5.25 75.74 21 5.92 Yes 73 -1.99 No 0 0 No -20 0.83 Yes 30 51.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68473083 + NM_133509 RAD51B 0 . . . 2.71 82.08 39 7.14 Yes 29 0.65 No 0 0 No -23 0.35 No 44 79.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59875967 - NM_032043 BRIP1 0 . . . 3.99 0 25 5.56 Yes 24 1.41 Yes 0 0 No -24 0.96 Yes 28 79.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56802767 + NM_058216 RAD51C 0 . . . 0.51 75.03 18 6.01 Yes 20 0.59 No 0 0 No -23 0.46 No 38 60.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47724532 + NM_000251 MSH2 0 . . . 4.93 84.41 45 4.8 No 25 1.17 Yes 0 0 No -35 0.5 No 33 95.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59907931 - NM_032043 BRIP1 0 . . . 4.51 78 28 5.29 No 51 0.85 Yes 0 0 No -28 0.87 Yes 37 76.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41207419 - NM_007294 BRCA1 0 . . . 4.23 72.94 22 3.97 No 13 1.14 Yes 0 0 No -21 0.7 Yes 45 91.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68961608 + NM_133509 RAD51B 0 . . . 0.98 72.62 19 4.06 No 70 -5.86 No 0 0 No -24 0.67 Yes 47 25.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190673310 + NM_000534 PMS1 0 . . . 3.18 82.25 31 6.82 Yes 13 1.56 Yes 0 0 No -30 0.88 Yes 45 73.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131902093 + NM_005732 RAD50 0 . . . 2.05 74.38 21 5.2 No 56 0.43 No 0 0 No -20 0.39 No 46 78.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68906007 + NM_133509 RAD51B 0 . . . 0.05 0 21 5.1 No 39 1.2 Yes 0 0 No -20 0.68 Yes 19 69.46 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68997327 + NM_133509 RAD51B 0 . . . 2.68 65.37 24 4.79 No 52 0.21 No 0 0 No -23 0.63 No 45 51.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32916862 + NM_000059 BRCA2 0 . . . 2.54 63.06 12 3.89 No 22 0.19 No 0 0 No -20 0.87 Yes 46 39.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68358035 + NM_133509 RAD51B 0 . . . 0.27 74.8 15 2.74 No 23 0.34 No 0 0 No -34 0.84 Yes 48 48.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108155331 + NM_000051 ATM 0 . . . 2.98 70.55 33 6.45 Yes 0 1 Yes 0 0 No -32 0.7 Yes 47 90.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23642392 - NM_024675 PALB2 0 . . . 0.42 74.73 13 4.36 No 49 1.64 Yes 0 0 No -48 0.8 Yes 9 72.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68479353 + NM_133509 RAD51B 0 . . . 7.73 82.57 17 5.82 Yes 70 -4.15 No 0 0 No -27 0.59 No 41 69.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59830762 - NM_032043 BRIP1 0 . . . 4.08 75.03 35 5.82 Yes 58 1.8 Yes 0 0 No -34 0.58 No 44 60.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29133180 - NM_001005735 CHEK2 0 . . . 3.59 76.3 15 4.58 No 46 1.27 Yes 0 0 No -21 0.45 No 47 28.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89708415 + NM_000314 PTEN 0 . . . 2.93 62.42 26 5.29 No 70 -6.21 No 0 0 No -25 0.54 No 47 90.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90947493 - NM_002485 NBN 0 . . . 4.64 68.15 18 4.9 No 14 0.99 Yes 0 0 No -25 0.77 Yes 44 79.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59935545 - NM_032043 BRIP1 0 . . . 2.22 60.87 27 5.72 Yes 14 0.97 Yes 0 0 No -26 0.83 Yes 44 78.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48020870 + NM_000179 MSH6 0 . . . 0.82 62.78 19 3.49 No 21 -3.71 No 0 0 No -17 0.76 Yes 50 48.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84395345 - NM_139076 FAM175A 0 . . . 0.5 58.87 31 7.42 Yes 71 -4.46 No 0 0 No -33 0.57 No 47 48.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69093962 + NM_133509 RAD51B 0 . . . 2.76 77.18 39 6.51 Yes 60 0.27 No 0 0 No -38 0.63 No 39 38.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89662579 + NM_000314 PTEN 0 . . . 3.8 72.63 18 4.69 No -1 1.23 Yes 0 0 No -35 0.57 No 55 47.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104172583 - NM_001100119 XRCC3 0 . . . 2.52 73.6 20 5.66 Yes -3 1.31 Yes 0 0 No -27 0.7 Yes 52 77.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68840746 + NM_133509 RAD51B 0 . . . 5.13 65.38 16 4.56 No 73 0.76 No 0 0 No -21 0.82 Yes 32 64.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47750005 + NM_000251 MSH2 0 . . . 1.2 0 37 6.19 Yes 75 -3.25 No 0 0 No -36 0.45 No 47 75.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68791926 + NM_133509 RAD51B 0 . . . 0.26 67 28 5.96 Yes 52 1.79 Yes 0 0 No -25 0.63 No 48 37.98 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84397016 - NM_139076 FAM175A 0 . . . 1.39 66.89 43 4.79 No 31 1.65 Yes 0 0 No -25 0.64 No 26 67.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68647051 + NM_133509 RAD51B 0 . . . 3.83 69.16 14 4.99 No 66 2.48 Yes 0 0 No -18 0.27 No 48 32.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68946810 + NM_133509 RAD51B 0 . . . 1.08 77.92 34 6.32 Yes 22 0.86 Yes 0 0 No -33 0.59 No 35 46.07 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108108772 + NM_000051 ATM 0 . . . 1.08 84.22 15 5.39 No 33 0.88 Yes 0 0 No -22 0.61 No 50 31.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68849098 + NM_133509 RAD51B 0 . . . 4.25 78.1 28 5.39 No 0 0.59 No 0 0 No -27 0.68 Yes 54 41.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59800815 - NM_032043 BRIP1 0 . . . 3.7 64.9 10 3.98 No 1 0.24 No 0 0 No -29 0.87 Yes 40 72.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68988446 + NM_133509 RAD51B 0 . . . 2.45 81.35 18 5.29 No 43 0.29 No 0 0 No -21 0.87 Yes 43 81.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68514885 + NM_133509 RAD51B 0 . . . 0.55 64.34 15 4.58 No 26 -3.65 No 0 0 No -14 0.2 No 52 17.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89640946 + NM_000314 PTEN 0 . . . 6.1 91.19 24 4.58 No 73 0.4 No 0 0 No -20 0.59 No 44 74.12 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59769429 - NM_032043 BRIP1 0 . . . 6.99 75.47 35 5.83 Yes 8 1.16 Yes 0 0 No -34 0.29 No 30 59.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152343542 - NM_005431 XRCC2 0 . . . 2.26 84.59 29 4.98 No 27 -1.79 No 0 0 No -29 0.61 No 48 41.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015147 + NM_000179 MSH6 0 . . . 0.68 73.44 14 5.37 No 30 -2.94 No 0 0 No -23 0.68 Yes 43 84.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68805569 + NM_133509 RAD51B 0 . . . 5.82 71.96 13 4.36 No 63 -1.73 No 0 0 No -29 0.82 Yes 42 93.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32915976 + NM_000059 BRCA2 0 . . . 1.73 76.63 11 5 No 15 0.33 No 0 0 No -42 0.43 No 43 73.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89710260 + NM_000314 PTEN 0 . . . 4.13 80.74 20 4.8 No 32 0.74 No 0 0 No -25 0.71 Yes 44 55.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29107908 - NM_001005735 CHEK2 0 . . . 1.89 78.74 36 5.81 Yes 67 -3.55 No 0 0 No -25 0.61 No 45 79.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68605599 + NM_133509 RAD51B 0 . . . 1.69 71.78 28 4.67 No 46 0.28 No 0 0 No -27 0.41 No 50 68.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68457328 + NM_133509 RAD51B 0 . . . 0.52 74.78 10 4 No 71 0.69 No 0 0 No -31 0.64 No 51 28.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108105701 + NM_000051 ATM 0 . . . 1.54 78.33 14 4.47 No 58 1.02 Yes 0 0 No -30 0.67 Yes 49 56.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90992433 - NM_002485 NBN 0 . . . 2.18 62.32 19 4.7 No 25 -3.49 No 0 0 No -25 0.74 Yes 50 42.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108181200 + NM_000051 ATM 0 . . . 4.5 69.62 22 6.85 Yes 1 0.14 No 0 0 No -21 0.96 Yes 40 48.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23652842 - NM_024675 PALB2 0 . . . 8.83 82.36 19 8.5 Yes 43 -1.19 No 0 0 No -18 0.76 Yes 40 53.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108112555 + NM_000051 ATM 0 . . . 3.04 81.65 16 6.24 Yes 36 1.46 Yes 0 0 No -22 0.35 No 53 58.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190689228 + NM_000534 PMS1 0 . . . 2.23 83.54 20 4.17 No 46 1.19 Yes 0 0 No -27 0.83 Yes 46 47.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68634490 + NM_133509 RAD51B 0 . . . 1.53 64.53 26 6.03 Yes 6 1.64 Yes 0 0 No -25 0.91 Yes 40 41.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215597568 - NM_000465 BARD1 0 . . . 3.42 80.4 36 9.02 Yes 8 0.13 No 0 0 No -35 0.7 Yes 45 85.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68565810 + NM_133509 RAD51B 0 . . . 8.41 83.15 48 8.07 Yes 55 0.64 No 0 0 No -37 0.81 Yes 36 63.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108097043 + NM_000051 ATM 0 . . . 6.93 67.85 19 4.58 No 71 0.83 Yes 0 0 No -18 0.88 Yes 34 61.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48013092 + NM_000179 MSH6 0 . . . 1.53 72.56 22 5.14 No 46 0.69 No 0 0 No -26 0.64 No 45 37.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68346937 + NM_133509 RAD51B 0 . . . 5.82 79.85 21 4.3 No 3 0.95 Yes 0 0 No -20 0.58 No 46 44.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59882961 - NM_032043 BRIP1 0 . . . 2.36 75.02 22 4.8 No -4 0.24 No 0 0 No -21 0.95 Yes 33 79.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23623388 - NM_024675 PALB2 0 . . . 1.53 76.46 17 5.9 Yes 26 0.67 No 0 0 No -34 0.73 Yes 51 88.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68551384 + NM_133509 RAD51B 0 . . . 6.57 81.14 35 6.4 Yes 71 1.54 Yes 0 0 No -34 0.84 Yes 40 49.83 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108136813 + NM_000051 ATM 0 . . . 5.85 83.26 17 4.7 No -3 0.1 No 0 0 No -22 0.71 Yes 52 69.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32903221 + NM_000059 BRCA2 0 . . . 2.71 73.86 20 7.14 Yes 57 1.44 Yes 0 0 No -19 0.6 No 42 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68874319 + NM_133509 RAD51B 0 . . . 3.78 77.34 14 4.24 No 32 -3.08 No 0 0 No -30 0.72 Yes 48 48.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131965436 + NM_005732 RAD50 0 . . . 3.98 80.91 18 5.35 No 41 1.21 Yes 0 0 No -22 0.3 No 50 72.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68777707 + NM_004360 CDH1 0 . . . 2.22 70.47 16 5.11 No 70 -5.73 No 0 0 No -26 0.89 Yes 55 31.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131922238 + NM_005732 RAD50 0 . . . 8.48 89.69 23 5.46 No 8 0.18 No 0 0 No -22 0.83 Yes 50 68.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21986132 - NM_000077 CDKN2A 0 . . . 2.76 74.47 18 4.9 No 38 0.47 No 0 0 No -21 0.73 Yes 50 83.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47645903 + NM_000251 MSH2 0 . . . 1.01 63.35 17 5.99 Yes 70 1.34 Yes 0 0 No -20 0.5 No 46 21.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84383849 - NM_139076 FAM175A 0 . . . 2.32 70.25 19 5.74 Yes 0 0.83 Yes 0 0 No -18 0.53 No 42 60.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190714472 + NM_000534 PMS1 0 . . . 0.85 70.13 37 6.75 Yes 10 1.09 Yes 0 0 No -32 0.59 No 48 57.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90998088 - NM_002485 NBN 0 . . . 2.86 73.12 14 4.72 No 17 0.58 No 0 0 No -24 0.66 Yes 40 84.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89732499 + NM_000314 PTEN 0 . . . 0.68 66.65 14 5 No 38 0.32 No 0 0 No -18 0.38 No 53 42.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89638773 + NM_000314 PTEN 0 . . . 1.89 69.03 24 5.47 No 4 0.65 No 0 0 No -24 0.67 Yes 38 65.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131953569 + NM_005732 RAD50 0 . . . 0.28 76.32 35 5.38 No 58 -5.76 No 0 0 No -29 0.58 No 47 62.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94179969 - NM_005591 MRE11 0 . . . 2.19 68.75 22 4.58 No 74 -3.89 No 0 0 No -18 0.46 No 41 47.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68840355 + NM_004360 CDH1 0 . . . 0.73 74.73 12 3.58 No 62 1.56 Yes 0 0 No -51 0.34 No 50 64.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59857988 - NM_032043 BRIP1 0 . . . 2.36 73.28 45 5.91 Yes 33 0.95 Yes 0 0 No -35 0.67 Yes 50 66.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68984754 + NM_133509 RAD51B 0 . . . 1.11 0 30 5.48 No 37 0.08 No 0 0 No -29 0.36 No 57 43.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190726447 + NM_000534 PMS1 0 . . . 2.1 76.63 28 6.48 Yes 59 -3.94 No 0 0 No -27 0.88 Yes 48 66.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68774084 + NM_004360 CDH1 0 . . . 3.41 84.59 17 4.76 No 37 0.86 Yes 0 0 No -21 0.87 Yes 49 55.75 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21973306 - NM_000077 CDKN2A 0 . . . 0.06 64.53 36 6 Yes 55 0.02 No 0 0 No -29 0.54 No 50 45.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68531215 + NM_133509 RAD51B 0 . . . 5.24 76.03 22 4.38 No 42 0.02 No 0 0 No -21 0.61 No 48 60.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29121232 - NM_001005735 CHEK2 0 . . . 6 90.15 18 4.5 No 67 0.02 No 0 0 No -17 0.79 Yes 47 73.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68830745 + NM_133509 RAD51B 0 . . . 8.14 86.35 27 6.58 Yes 20 -0.7 No 0 0 No -26 0.92 Yes 52 71.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68488860 + NM_133509 RAD51B 0 . . . 6.08 71.54 30 6.4 Yes 66 0.56 No 0 0 No -29 0.54 No 41 83.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68348296 + NM_133509 RAD51B 0 . . . 7.83 87.11 38 3.91 No 26 -0.5 No 0 0 No -31 0.71 Yes 32 67.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108151531 + NM_000051 ATM 0 . . . 3.51 72.06 30 5.54 No 11 1.07 Yes 0 0 No -29 0.47 No 47 96.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68735613 + NM_133509 RAD51B 0 . . . 4.59 80.66 17 4.77 No 56 0.82 Yes 0 0 No -21 0.6 No 48 85.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68645053 + NM_133509 RAD51B 0 . . . 5.27 75.04 21 6.56 Yes 69 0.81 Yes 0 0 No -20 0.95 Yes 36 65.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37066048 + NM_000249 MLH1 0 . . . 0.65 73.55 12 4.8 No 72 1.26 Yes 0 0 No -24 0.79 Yes 47 84.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 7583205 - NM_000546 TP53 0 . . . 2.26 73.91 25 5.39 No 54 -3.61 No 0 0 No -22 0.8 Yes 51 58.87 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215673282 - NM_000465 BARD1 0 . . . 1.92 76.79 17 6.52 Yes 60 0.84 Yes 0 0 No -29 0.37 No 48 65.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90992567 - NM_002485 NBN 0 . . . 11.08 89.72 13 4.19 No 25 1.14 Yes 0 0 No -20 0.86 Yes 43 74.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68567083 + NM_133509 RAD51B 0 . . . 6.82 79.44 21 4.31 No 13 1.18 Yes 0 0 No -29 0.68 Yes 45 85.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47652917 + NM_000251 MSH2 0 . . . 5.79 84.51 19 3.82 No 5 0.3 No 0 0 No -24 0.58 No 43 73.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68365718 + NM_133509 RAD51B 0 . . . 3.48 71.44 21 5.2 No 15 1.07 Yes 0 0 No -29 0.49 No 43 80.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68619803 + NM_133509 RAD51B 0 . . . 5.87 77.92 27 5.25 No 54 0.79 Yes 0 0 No -26 0.95 Yes 44 48.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1205179 + NM_000455 STK11 0 . . . 4.36 75.7 16 4.68 No 17 -1.49 No 0 0 No -37 0.34 No 41 88.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84403545 - NM_139076 FAM175A 0 . . . 3.17 74.49 18 5.72 Yes 42 1.24 Yes 0 0 No -26 0.36 No 40 93.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84407012 - NM_139076 FAM175A 0 . . . 2.08 69.7 33 6.06 Yes 46 -3.42 No 0 0 No -27 0.62 No 47 40.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190648089 + NM_000534 PMS1 0 . . . 0.21 71.22 22 7.28 Yes 4 0.72 No 0 0 No -21 0.93 Yes 41 90 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89719238 + NM_000314 PTEN 0 . . . 2.32 0 21 5.59 Yes 9 1.57 Yes 0 0 No -20 0.56 No 49 66.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45801269 - NM_001048171 MUTYH 0 . . . 0.56 83.52 20 4.9 No 27 0.76 No 0 0 No -61 0.61 No 44 72.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215674344 - NM_000465 BARD1 0 . . . 4.04 77.22 37 7.75 Yes NA NA NA 0 0 No -36 0.46 No 48 88.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40985714 + NM_001164269 RAD51 0 . . . 3.32 70.85 25 5.56 Yes 21 1.71 Yes 0 0 No -24 0.74 Yes 37 61.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84385410 - NM_139076 FAM175A 0 . . . 1.69 0 17 7.81 Yes 4 0.67 No 0 0 No -25 0.41 No 40 70.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75483201 - NM_001040108 MLH3 0 . . . 0.45 0 23 5.39 No 7 -1.03 No 0 0 No -22 0.69 Yes 48 73.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47629228 + NM_000251 MSH2 0 . . . 3.14 71.4 36 6.05 Yes 18 0.59 No 0 0 No -21 0.79 Yes 40 78.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56783415 + NM_058216 RAD51C 0 . . . 0.66 60.18 28 6.91 Yes 59 0.49 No 0 0 No -27 0.58 No 36 45.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94221857 - NM_005591 MRE11 0 . . . 8.17 77.37 32 5.83 Yes 38 1 Yes 0 0 No -31 0.53 No 38 97.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21970789 - NM_000077 CDKN2A 0 . . . 5.91 78.65 24 3.96 No 51 0.26 No 0 0 No -26 0.46 No 50 61.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68767384 + NM_133509 RAD51B 0 . . . 0.91 62.82 16 5.2 No 32 1.83 Yes 0 0 No -22 0.51 No 42 70.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68797835 + NM_004360 CDH1 0 . . . 2.59 68.24 18 4.9 No 34 0.35 No 0 0 No -20 0.56 No 19 41.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69095276 + NM_133509 RAD51B 0 . . . 3.15 72.86 19 4.92 No 35 1.52 Yes 0 0 No -31 0.43 No 23 84.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37075337 + NM_000249 MLH1 0 . . . 10.34 78.28 27 5.74 Yes 30 0.42 No 0 0 No -26 0.71 Yes 28 68.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90977849 - NM_002485 NBN 0 . . . 5.32 77.46 26 5.17 No 53 0.44 No 0 0 No -21 0.89 Yes 36 70.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69112274 + NM_133509 RAD51B 0 . . . 5.06 77.14 24 4.54 No 1 1.12 Yes 0 0 No -27 0.87 Yes 49 93.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69005780 + NM_133509 RAD51B 0 . . . 4.78 75.03 26 5.89 Yes 73 0.9 Yes 0 0 No -25 0.48 No 48 88.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59841946 - NM_032043 BRIP1 0 . . . 2.74 69.02 32 6.43 Yes 16 0.46 No 0 0 No -31 0.83 Yes 48 50.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131931423 + NM_005732 RAD50 0 . . . 4.46 76.72 22 3.65 No 51 -4.22 No 0 0 No -21 0.86 Yes 52 53.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6047436 - NM_000535 PMS2 0 . . . 3.27 72.18 15 4.8 No 1 0.44 No 0 0 No -58 0.4 No 41 51.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105195097 + NM_021930 RINT1 0 . . . 0.22 74.73 22 3.83 No 33 1.02 Yes 0 0 No -40 0.56 No 44 23.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75490784 - NM_001040108 MLH3 0 . . . 1.15 0 15 4.3 No 13 0.8 Yes 0 0 No -14 0.26 No 57 32.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89631578 + NM_000314 PTEN 0 . . . 3.5 74.73 34 6.31 Yes 69 0.84 Yes 0 0 No -33 0.8 Yes 52 85.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84394934 - NM_139076 FAM175A 0 . . . 2.79 77.14 35 5.92 Yes 54 0.57 No 0 0 No -32 0.74 Yes 44 80.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68354244 + NM_133509 RAD51B 0 . . . 4.93 84.88 14 5 No 36 1.15 Yes 0 0 No -18 0.4 No 22 73.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94154854 - NM_005591 MRE11 0 . . . 6.26 73.45 24 5.87 Yes 44 1.44 Yes 0 0 No -30 0.48 No 18 69.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68843474 + NM_004360 CDH1 0 . . . 3.65 71.77 17 6.23 Yes 15 -0.22 No 0 0 No -28 0.45 No 11 81.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68615607 + NM_133509 RAD51B 0 . . . 4.87 77.97 13 4.64 No -1 0.49 No 0 0 No -25 0.46 No 43 68.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47685692 + NM_000251 MSH2 0 . . . 3.22 84.41 57 9.28 Yes 37 1.05 Yes 0 0 No -30 0.84 Yes 48 47.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90957272 - NM_002485 NBN 0 . . . 0.3 59.75 25 6.92 Yes 59 1.24 Yes 0 0 No -24 0.67 Yes 52 40.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48032437 + NM_000179 MSH6 0 . . . 1.41 84.22 32 7.25 Yes 32 1.12 Yes 0 0 No -31 0.88 Yes 50 51.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68787968 + NM_133509 RAD51B 0 . . . 0.63 58.94 33 8.48 Yes 22 0.67 No 0 0 No -32 0.62 No 28 66.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89680141 + NM_000314 PTEN 0 . . . 0.46 69.68 22 5.22 No -4 0.28 No 0 0 No -21 0.66 No 43 57.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89683335 + NM_000314 PTEN 0 . . . 5.33 79.36 12 5.92 Yes 15 -2.3 No 0 0 No -28 0.3 No 38 59.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59755269 - NM_032043 BRIP1 0 . . . 5.18 78.28 25 4.26 No 52 0.45 No 0 0 No -24 0.5 No 49 26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47741868 + NM_000251 MSH2 0 . . . 1.94 80.65 23 5.35 No 76 0.92 Yes 0 0 No -22 0.65 No 50 89.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90973753 - NM_002485 NBN 0 . . . 1.21 76.34 25 4.89 No 21 1.76 Yes 0 0 No -20 0.63 No 41 71.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89727024 + NM_000314 PTEN 0 . . . 2.45 76.32 19 4.58 No 35 0.91 Yes 0 0 No -18 0.81 Yes 47 91.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69049489 + NM_133509 RAD51B 0 . . . 1.7 65.4 39 6.71 Yes 49 -4.57 No 0 0 No -26 0.56 No 46 43.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32930388 + NM_000059 BRCA2 0 . . . 5.4 85.37 28 5.26 No 58 -1.01 No 0 0 No -27 0.72 Yes 43 66.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190662077 + NM_000534 PMS1 0 . . . 2.46 70.5 16 5.56 Yes -2 0.06 No 0 0 No -22 0.43 No 44 92.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68925845 + NM_133509 RAD51B 0 . . . 0.77 62.81 41 6.98 Yes 11 -1.72 No 0 0 No -36 0.45 No 50 35.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68862717 + NM_133509 RAD51B 0 . . . 0.5 67.61 46 7.14 Yes 47 0.1 No 0 0 No -22 0.84 Yes 26 48.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47789894 + NM_000251 MSH2 0 . . . 7.85 86.7 21 4.94 No 40 0.27 No 0 0 No -23 0.57 No 40 71.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108186802 + NM_000051 ATM 0 . . . 2.85 67.68 28 5.83 Yes 70 0.12 No 0 0 No -30 0.72 Yes 51 69.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29089478 - NM_001005735 CHEK2 0 . . . 0.94 69.22 33 7.34 Yes 52 0.41 No 0 0 No -39 0.26 No 50 85.43 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68929929 + NM_133509 RAD51B 0 . . . 0.75 0 33 7.51 Yes 47 0.76 No 0 0 No -32 0.89 Yes 54 82.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37066445 + NM_000249 MLH1 0 . . . 6.1 87.02 25 5.1 No 66 0.65 No 0 0 No -24 0.89 Yes 47 93.78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89649726 + NM_000314 PTEN 0 . . . 2.88 67.77 19 5 No 49 -4.41 No 0 0 No -18 0.45 No 49 68.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47699102 + NM_000251 MSH2 0 . . . 0.64 0 16 5.24 No 73 -5.17 No 0 0 No -26 0.5 No 53 79.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69045627 + NM_133509 RAD51B 0 . . . 0.47 64.43 15 5.19 No 61 1.19 Yes 0 0 No -33 0.75 Yes 53 38.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37082718 + NM_000249 MLH1 0 . . . 3.21 67.66 23 3.96 No 33 0.77 Yes 0 0 No -25 0.61 No 34 63.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47664540 + NM_000251 MSH2 0 . . . 1.32 67.54 18 4.8 No -4 0.7 No 0 0 No -21 0.46 No 35 77.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37050992 + NM_000249 MLH1 0 . . . 3.89 71.37 45 5.55 No 55 -4.87 No 0 0 No -24 0.64 No 51 60.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108125474 + NM_000051 ATM 0 . . . 7.43 83.17 21 5.09 No 9 1.19 Yes 0 0 No -20 0.83 Yes 49 93.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94164320 - NM_005591 MRE11 0 . . . 9.49 93.71 45 6.86 Yes 2 1.11 Yes 0 0 No -22 0.74 Yes 35 53.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68733178 + NM_133509 RAD51B 0 . . . 3.69 0 16 4.22 No 11 -0.63 No 0 0 No -20 0.89 Yes 55 70.3 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68843786 + NM_133509 RAD51B 0 . . . 4.5 0 20 5.74 Yes 69 -4.94 No 0 0 No -26 0.66 Yes 49 62.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59923378 - NM_032043 BRIP1 0 . . . 5.2 85.02 20 4.67 No 5 1.23 Yes 0 0 No -19 0.43 No 53 82.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59803623 - NM_032043 BRIP1 0 . . . 3.99 72.49 16 4.7 No 42 1.65 Yes 0 0 No -51 0.48 No 31 64.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68373241 + NM_133509 RAD51B 0 . . . 3.35 81.68 27 5.36 No 22 -3.24 No 0 0 No -26 0.42 No 33 60.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68792041 + NM_133509 RAD51B 0 . . . 3.11 67.85 13 4.65 No 70 -4.07 No 0 0 No -31 0.29 No 47 46.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538027 + NM_133509 RAD51B 0 . . . 1.63 0 36 6.17 Yes 26 1.26 Yes 0 0 No -39 0.47 No 40 30.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68494065 + NM_133509 RAD51B 0 . . . 2.63 68.9 30 5.21 No 31 1.41 Yes 0 0 No -29 0.68 Yes 52 45.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69080804 + NM_133509 RAD51B 0 . . . 3.38 81.3 71 8.21 Yes 63 1.25 Yes 0 0 No -38 0.84 Yes 52 53.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68403213 + NM_133509 RAD51B 0 . . . 5.77 79.42 13 5.22 No 10 0.74 No 0 0 No -21 0.66 No 48 92.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68782616 + NM_004360 CDH1 0 . . . 0.34 72.7 18 5.74 Yes 61 -3.8 No 0 0 No -20 0.33 No 42 72.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89682364 + NM_000314 PTEN 0 . . . 6.01 77.11 17 4.46 No 34 -1.01 No 0 0 No -22 0.52 No 39 71.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89654239 + NM_000314 PTEN 0 . . . 1.73 72.75 44 6.55 Yes 68 0.61 No 0 0 No -33 0.3 No 48 77.25 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29133892 - NM_001005735 CHEK2 0 . . . 5.06 73.81 46 4.85 No 74 0.35 No 0 0 No -20 0.84 Yes 49 49.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29137188 - NM_001005735 CHEK2 0 . . . 1.28 76.73 37 7.14 Yes 17 -1.63 No 0 0 No -36 0.45 No 34 40.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32924163 + NM_000059 BRCA2 0 . . . 1.08 67.93 17 3.85 No 13 0.11 No 0 0 No -22 0.3 No 31 52.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68515527 + NM_133509 RAD51B 0 . . . 6.06 83.26 16 5.26 No -3 0.1 No 0 0 No -24 0.33 No 47 48.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668248 - NM_000465 BARD1 0 . . . 2.06 72.76 118 13.34 Yes 72 -3.83 No 0 0 No -28 0.4 No 36 51.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23628805 - NM_024675 PALB2 0 . . . 1.28 80.65 22 4.79 No 3 0.81 Yes 0 0 No -51 0.81 Yes 45 51.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215617690 - NM_000465 BARD1 0 . . . 5.46 82.85 32 6.52 Yes 22 0.64 No 0 0 No -31 0.79 Yes 36 49.58 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68416232 + NM_133509 RAD51B 0 . . . 5.32 79.8 30 4.25 No 24 0.86 Yes 0 0 No -29 0.75 Yes 34 97.27 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89704432 + NM_000314 PTEN 0 . . . 5.86 70.73 36 6.22 Yes 19 0.43 No 0 0 No -35 0.49 No 31 61.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47736895 + NM_000251 MSH2 0 . . . 6.3 79.43 22 5.1 No 2 1.03 Yes 0 0 No -25 0.68 Yes 45 54.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108188715 + NM_000051 ATM 0 . . . 3.75 62.55 31 5.52 No 70 -0.82 No 0 0 No -24 0.93 Yes 31 59.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68762293 + NM_133509 RAD51B 0 . . . 5.65 89.25 23 4.62 No 30 1 Yes 0 0 No -22 0.49 No 43 78.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69096425 + NM_133509 RAD51B 0 . . . 4.53 76.88 17 4.58 No 39 1.12 Yes 0 0 No -23 0.39 No 51 54.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68941582 + NM_133509 RAD51B 0 . . . 2.77 68.16 80 8.99 Yes 2 0.16 No 0 0 No -27 0.95 Yes 50 71.46 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131975677 + NM_005732 RAD50 0 . . . 1.47 82.5 25 5.07 No 64 1.15 Yes 0 0 No -24 0.7 Yes 44 91.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68388689 + NM_133509 RAD51B 0 . . . 0.27 0 16 5.83 Yes 1 0.57 No 0 0 No -25 0.47 No 57 52.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674497 + NM_000251 MSH2 0 . . . 3.45 85.02 14 5 No 3 1.16 Yes 0 0 No -20 0.56 No 45 65.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108184961 + NM_000051 ATM 0 . . . 1.66 79.89 34 5.78 Yes 8 0.67 No 0 0 No -25 0.73 Yes 50 80.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68776106 + NM_004360 CDH1 0 . . . 2.97 75.42 19 5.57 Yes 50 1.18 Yes 0 0 No -31 0.54 No 52 43.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41275147 - NM_007294 BRCA1 0 . . . 0.63 80.65 50 5.49 No 34 0.92 Yes 0 0 No -49 0.5 No 50 57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68676778 + NM_133509 RAD51B 0 . . . 1 60.38 29 7.6 Yes 59 0.94 Yes 0 0 No -28 0.84 Yes 42 82.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69018488 + NM_133509 RAD51B 0 . . . 7.99 94.95 20 5.71 Yes 6 0.77 No 0 0 No -19 0.5 No 45 42.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69035193 + NM_133509 RAD51B 0 . . . 1.85 70.95 19 6.51 Yes 62 -4.7 No 0 0 No -29 0.4 No 49 23.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131952340 + NM_005732 RAD50 0 . . . 6.63 83.92 20 4.49 No 46 1.11 Yes 0 0 No -22 0.46 No 43 96.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68580221 + NM_133509 RAD51B 0 . . . 3.46 88.47 49 7.18 Yes 55 -3.66 No 0 0 No -30 0.84 Yes 47 32.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21978114 - NM_000077 CDKN2A 0 . . . 4.19 66.58 20 4.58 No 20 1.93 Yes 0 0 No -19 0.84 Yes 38 80.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40990568 + NM_001164269 RAD51 0 . . . 3.14 79.63 26 7.13 Yes 4 1.46 Yes 0 0 No -25 0.67 Yes 54 67.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68381595 + NM_133509 RAD51B 0 . . . 10.12 88.36 15 4.58 No 9 0.69 No 0 0 No -31 0.4 No 49 53.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68713302 + NM_133509 RAD51B 0 . . . 1.6 0 37 5.7 Yes 21 0.42 No 0 0 No -36 0.35 No 46 78.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69112693 + NM_133509 RAD51B 0 . . . 0.31 60.28 35 5.37 No -3 0.49 No 0 0 No -23 0.65 No 50 30.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68786833 + NM_133509 RAD51B 0 . . . 7.28 71.93 17 4.16 No 27 0.77 No 0 0 No -29 0.47 No 39 66.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215663764 - NM_000465 BARD1 0 . . . 7.44 88.87 18 4.8 No 9 0.57 No 0 0 No -16 0.66 Yes 49 93.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89626793 + NM_000314 PTEN 0 . . . 1.92 71.9 9 3.87 No 36 1.47 Yes 0 0 No -27 0.56 No 16 87.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59766144 - NM_032043 BRIP1 0 . . . 7.65 82.95 21 4.11 No 13 1.08 Yes 0 0 No -26 0.37 No 45 96.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90979687 - NM_002485 NBN 0 . . . 3.36 0 24 6.13 Yes 59 0.97 Yes 0 0 No -26 0.73 Yes 46 68.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108206688 + NM_000051 ATM 0 . . . 4.79 77.57 45 6.78 Yes 6 0.88 Yes 0 0 No -30 0.44 No 52 62.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152366540 - NM_005431 XRCC2 0 . . . 4.25 82.62 22 4.8 No 15 0.2 No 0 0 No -21 0.95 Yes 43 82.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105175701 + NM_021930 RINT1 0 . . . 3.03 0 50 7.8 Yes 64 1.06 Yes 0 0 No -32 0.77 Yes 38 92.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23622904 - NM_024675 PALB2 0 . . . 2.64 70.6 27 6.16 Yes 59 0.64 No 0 0 No -26 0.74 Yes 30 52.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69116443 + NM_133509 RAD51B 0 . . . 2.52 79.3 25 5 No 58 0.06 No 0 0 No -24 0.89 Yes 49 25.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90985578 - NM_002485 NBN 0 . . . 1.43 66.15 45 8.07 Yes 63 -4.98 No 0 0 No -44 0.48 No 42 58.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68584912 + NM_133509 RAD51B 0 . . . 5.73 82.5 94 10.38 Yes 66 -5.01 No 0 0 No -45 0.41 No 46 73.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190733247 + NM_000534 PMS1 0 . . . 10.57 81.05 29 5.29 No 25 0.11 No 0 0 No -44 0.63 No 33 85.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68827546 + NM_004360 CDH1 0 . . . 0.01 74.23 22 5.66 Yes 62 0.46 No 0 0 No -22 0.52 No 54 83.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41000310 + NM_001164269 RAD51 0 . . . 10.51 87.87 28 5.45 No 8 1.54 Yes 0 0 No -27 0.84 Yes 50 93.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215611458 - NM_000465 BARD1 0 . . . 6.45 80.31 16 5.79 Yes 33 0.89 Yes 0 0 No -28 0.6 No 50 42.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68629705 + NM_133509 RAD51B 0 . . . 2.33 81.88 16 4.28 No -3 0.25 No 0 0 No -19 0.91 Yes 47 81.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68319580 + NM_133509 RAD51B 0 . . . 2.42 69.01 15 3.41 No 46 1.12 Yes 0 0 No -22 0.46 No 54 64.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89621551 + NM_000314 PTEN 0 . . . 2.44 76.03 34 6.05 Yes 35 0.94 Yes 0 0 No -33 0.75 Yes 23 41.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68629473 + NM_133509 RAD51B 0 . . . 2.39 76.63 39 6.51 Yes 58 -3.89 No 0 0 No -28 0.4 No 43 39.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69056628 + NM_133509 RAD51B 0 . . . 3.53 70.82 68 8.05 Yes 37 0.07 No 0 0 No -37 0.43 No 45 96.63 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47682094 + NM_000251 MSH2 0 . . . 6.29 71.88 19 4.31 No 50 0.98 Yes 0 0 No -22 0.34 No 33 62.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47666926 + NM_000251 MSH2 0 . . . 6.27 85.07 59 7.94 Yes 75 0.11 No 0 0 No -26 0.43 No 44 87.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41240300 - NM_007294 BRCA1 0 . . . 2.08 0 11 4.12 No 70 -4.12 No 0 0 No -27 0.42 No 60 32.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48022820 + NM_000179 MSH6 0 . . . 1.35 75.84 28 5.39 No 38 1.32 Yes 0 0 No -31 0.59 No 20 94.8 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6036280 - NM_000535 PMS2 0 . . . 5.01 73.04 29 6.17 Yes 69 0.34 No 0 0 No -28 0.51 No 24 43.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190661320 + NM_000534 PMS1 0 . . . 1.62 0 26 5.6 Yes 28 1.7 Yes 0 0 No -25 0.91 Yes 30 97.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68794119 + NM_133509 RAD51B 0 . . . 3.34 81.81 12 5.2 No 42 0.51 No 0 0 No -40 0.53 No 31 94.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29099683 - NM_001005735 CHEK2 0 . . . 1.04 66.06 21 5.64 Yes 41 0.64 No 0 0 No -20 0.87 Yes 34 74.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59757887 - NM_032043 BRIP1 0 . . . 1.27 76.63 42 7.48 Yes 67 -4.97 No 0 0 No -35 0.62 No 43 74.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68438025 + NM_133509 RAD51B 0 . . . 2.78 77.73 39 6.01 Yes 21 0.42 No 0 0 No -32 0.72 Yes 37 66.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68782169 + NM_133509 RAD51B 0 . . . 4.44 72.22 22 6.4 Yes 16 -1.79 No 0 0 No -21 0.97 Yes 43 48.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190689769 + NM_000534 PMS1 0 . . . 6.7 83.69 15 5.39 No 23 1.48 Yes 0 0 No -30 0.31 No 35 87.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47731078 + NM_000251 MSH2 0 . . . 4.48 76.41 43 7 Yes 62 0.46 No 0 0 No -26 0.8 Yes 50 66.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69068423 + NM_133509 RAD51B 0 . . . 2.61 75.32 38 5.55 No 48 1.15 Yes 0 0 No -37 0.63 No 26 91.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37081986 + NM_000249 MLH1 0 . . . 5.09 70.95 48 5.63 Yes 1 0.18 No 0 0 No -29 0.82 Yes 50 79.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90953431 - NM_002485 NBN 0 . . . 10.96 94.29 27 10.2 Yes 40 1.07 Yes 0 0 No -26 0.74 Yes 42 83.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89634229 + NM_000314 PTEN 0 . . . 2.72 0 19 6.32 Yes 20 1.16 Yes 0 0 No -18 0.35 No 38 83.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68740423 + NM_133509 RAD51B 0 . . . 2.54 84.41 25 5.57 Yes 37 0.56 No 0 0 No -24 0.9 Yes 45 84.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69091639 + NM_133509 RAD51B 0 . . . 1.02 0 51 7.53 Yes 63 0 No 0 0 No -36 0.39 No 44 18.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69142943 + NM_133509 RAD51B 0 . . . 4.96 74.89 19 4.8 No 0 0.61 No 0 0 No -18 0.87 Yes 51 44.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47701022 + NM_000251 MSH2 0 . . . 0.32 0 74 8.46 Yes 65 0.38 No 0 0 No -34 0.64 No 48 33.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68602121 + NM_133509 RAD51B 0 . . . 4.44 68.29 36 7.48 Yes 67 1.39 Yes 0 0 No -30 0.72 Yes 36 80.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6039255 - NM_000535 PMS2 0 . . . 7.74 79.84 30 4.96 No 12 1.2 Yes 0 0 No -29 0.84 Yes 46 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68587547 + NM_133509 RAD51B 0 . . . 2.16 79.04 26 5.19 No 32 -3.99 No 0 0 No -25 0.79 Yes 45 88.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69039571 + NM_133509 RAD51B 0 . . . 3.35 84.59 68 8.56 Yes 72 1.24 Yes 0 0 No -52 0.51 No 42 74.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37093360 + NM_000249 MLH1 0 . . . 5.67 74.81 23 5.83 Yes 20 -2.57 No 0 0 No -22 0.74 Yes 52 86.36 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105177740 + NM_021930 RINT1 0 . . . 3.53 75.35 30 5.83 Yes 52 0.06 No 0 0 No -30 0.92 Yes 48 86.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37069732 + NM_000249 MLH1 0 . . . 0.21 74.23 37 4.52 No 53 0.84 Yes 0 0 No -31 0.62 No 36 57.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68826219 + NM_133509 RAD51B 0 . . . 3.58 84.32 20 6.37 Yes 26 0.02 No 0 0 No -19 0.8 Yes 46 44.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69081136 + NM_133509 RAD51B 0 . . . 4.42 73.5 35 5.68 Yes -4 0.44 No 0 0 No -28 0.89 Yes 44 89.69 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69079039 + NM_133509 RAD51B 0 . . . 4.87 73.39 21 7.52 Yes 57 1.08 Yes 0 0 No -25 0.76 Yes 37 47.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37074721 + NM_000249 MLH1 0 . . . 6.58 74 50 7.19 Yes -2 1.97 Yes 0 0 No -30 0.44 No 37 65.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84397618 - NM_139076 FAM175A 0 . . . 1.99 72.08 15 4.58 No 21 0.17 No 0 0 No -34 0.43 No 45 68.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215653136 - NM_000465 BARD1 0 . . . 3.88 67.51 26 5.48 No 24 0.96 Yes 0 0 No -26 0.63 No 44 63.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215662135 - NM_000465 BARD1 0 . . . 0.76 77.33 19 5.57 Yes 49 -3.31 No 0 0 No -21 0.75 Yes 45 60.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68962028 + NM_133509 RAD51B 0 . . . 4.81 88.71 34 4.34 No 8 0.87 Yes 0 0 No -33 0.51 No 50 78.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68849601 + NM_133509 RAD51B 0 . . . 1.28 60.6 17 4.8 No -3 0.05 No 0 0 No -22 0.65 No 43 35.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68995434 + NM_133509 RAD51B 0 . . . 4.48 84.17 23 5.01 No 42 1.31 Yes 0 0 No -22 0.6 No 16 85.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32966698 + NM_000059 BRCA2 0 . . . 0.97 66.58 28 5.38 No 15 0.05 No 0 0 No -27 0.9 Yes 43 79.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89696347 + NM_000314 PTEN 0 . . . 0.72 54.55 31 4.48 No 65 1.22 Yes 0 0 No -30 0.65 No 42 70.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68827160 + NM_133509 RAD51B 0 . . . 2.83 63.94 63 7.56 Yes 37 1.08 Yes 0 0 No -28 0.9 Yes 12 44.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89699479 + NM_000314 PTEN 0 . . . 6.08 85.59 23 4.29 No 46 0.7 No 0 0 No -22 0.48 No 49 42.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108241548 + NM_000051 ATM 0 . . . 2.92 79.06 19 4.92 No 71 0.55 No 0 0 No -30 0.6 No 45 85.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68537035 + NM_133509 RAD51B 0 . . . 9.67 93.1 18 5.99 Yes 15 0.38 No 0 0 No -17 0.51 No 43 96.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190722372 + NM_000534 PMS1 0 . . . 10.23 84.15 27 6.55 Yes NA NA NA 0 0 No -22 0.79 Yes 38 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45805152 - NM_001048171 MUTYH 0 . . . 0.09 74.68 21 5.2 No 4 0.41 No 0 0 No -20 0.61 No 54 87.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47637721 + NM_000251 MSH2 0 . . . 5.67 90.63 33 5.23 No 6 0.22 No 0 0 No -24 0.6 No 47 33.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89711278 + NM_000314 PTEN 0 . . . 1.96 77.15 22 4.42 No 23 1.28 Yes 0 0 No -37 0.54 No 25 66.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105180754 + NM_021930 RINT1 0 . . . 2.86 84 47 6.23 Yes 2 1.5 Yes 0 0 No -31 0.58 No 16 49.16 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89652685 + NM_000314 PTEN 0 . . . 5.22 79.04 25 5.92 Yes 25 0.73 No 0 0 No -24 0.85 Yes 49 54.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108222633 + NM_000051 ATM 0 . . . 3.12 78.24 32 8.45 Yes 28 2.64 Yes 0 0 No -31 0.73 Yes 30 93.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105206354 + NM_021930 RINT1 0 . . . 3.95 78.01 20 6.27 Yes 32 0.2 No 0 0 No -20 0.32 No 47 73.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215656817 - NM_000465 BARD1 0 . . . 0.7 77.68 44 5.69 Yes 34 0.7 No 0 0 No -25 0.74 Yes 20 63.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108208958 + NM_000051 ATM 0 . . . 2.25 65.89 34 5.67 Yes 32 -1.49 No 0 0 No -26 0.56 No 42 61.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33439663 - NM_002878 RAD51D 0 . . . 0.32 74.68 22 4.77 No 4 0.1 No 0 0 No -21 0.82 Yes 54 63.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32903138 + NM_000059 BRCA2 0 . . . 7.8 80.31 15 4.38 No 65 0.84 Yes 0 0 No -25 0.71 Yes 47 86.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190658060 + NM_000534 PMS1 0 . . . 0.78 0 41 5.47 No 46 0.63 No 0 0 No -16 0.7 Yes 47 61.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131904038 + NM_005732 RAD50 0 . . . 3.15 68.34 28 5.48 No 13 0.98 Yes 0 0 No -23 0.72 Yes 34 90.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131948564 + NM_005732 RAD50 0 . . . 2.72 69.73 11 4.58 No 33 -0.77 No 0 0 No -22 0.76 Yes 25 42.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59813780 - NM_032043 BRIP1 0 . . . 0.8 66.87 25 5 No 11 0.71 No 0 0 No -24 0.52 No 47 73.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37058958 + NM_000249 MLH1 0 . . . 9.66 85.23 20 5 No 2 1.66 Yes 28 0.7 Yes -18 0.65 No 42 46.9 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr3 37063951 + NM_000249 MLH1 0 . . . 1.92 74.65 29 5.92 Yes 55 -3.59 No 0 0 No -28 0.62 No 43 56.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1221783 + NM_000455 STK11 0 . . . 4.72 76.94 56 5.9 Yes NA NA NA 0 0 No -23 0.59 No 45 60.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23646852 - NM_024675 PALB2 0 . . . 1.86 70.08 16 4.66 No 16 0.79 Yes 0 0 No -20 0.75 Yes 51 67.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68285690 + NM_133509 RAD51B 0 . . . 2.19 0 27 5.2 No 42 0.71 No 0 0 No -26 0.7 Yes 47 85.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190659985 + NM_000534 PMS1 0 . . . 0.23 68.85 30 5.38 No 29 0.12 No 0 0 No -22 0.58 No 46 16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41227626 - NM_007294 BRCA1 0 . . . 4.74 80.22 36 5.32 No 67 -4.96 No 0 0 No -35 0.84 Yes 39 64.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68776615 + NM_133509 RAD51B 0 . . . 0.76 76.62 29 7.42 Yes -4 0.57 No 0 0 No -28 0.83 Yes 62 35.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68326151 + NM_133509 RAD51B 0 . . . 1.85 74.33 17 4.31 No 25 -3.24 No 0 0 No -31 0.53 No 51 34.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21996064 - NM_000077 CDKN2A 0 . . . 1.19 72.75 22 6.32 Yes 36 1.37 Yes 0 0 No -21 0.63 No 22 56.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68543092 + NM_133509 RAD51B 0 . . . 1.08 0 26 5.1 No 49 0.53 No 0 0 No -25 0.75 Yes 46 90.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47729960 + NM_000251 MSH2 0 . . . 5.3 71.48 39 5.39 No -2 0.43 No 0 0 No -30 0.45 No 38 53.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47728694 + NM_000251 MSH2 0 . . . 8.42 92.34 31 5.26 No 31 0.56 No 0 0 No -26 0.9 Yes 41 64.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68756479 + NM_133509 RAD51B 0 . . . 5.71 78.39 23 5.14 No 15 0.39 No 0 0 No -19 0.79 Yes 44 54.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89658443 + NM_000314 PTEN 0 . . . 4.61 68.95 52 8.29 Yes 27 0.68 No 0 0 No -29 0.7 Yes 31 80.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68776430 + NM_004360 CDH1 0 . . . 2.58 69.96 22 5.74 Yes 70 1.16 Yes 0 0 No -21 0.76 Yes 40 50.75 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90986828 - NM_002485 NBN 0 . . . 0.58 67.54 21 4.68 No 30 0.51 No 0 0 No -20 0.87 Yes 28 82.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41017464 + NM_001164269 RAD51 0 . . . 4.14 68.09 24 5.28 No 3 0.66 No 0 0 No -21 0.57 No 55 53.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68380160 + NM_133509 RAD51B 0 . . . 1.04 73 34 7.62 Yes 3 0.22 No 0 0 No -33 0.53 No 48 93.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68418491 + NM_133509 RAD51B 0 . . . 0.76 60.53 13 4.81 No 38 1.2 Yes 0 0 No -30 0.73 Yes 20 84.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68984549 + NM_133509 RAD51B 0 . . . 5 74.96 23 4.84 No 35 -1.41 No 0 0 No -17 0.65 No 42 78.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23639468 - NM_024675 PALB2 0 . . . 8.31 87.51 22 5.76 Yes 8 1.25 Yes 0 0 No -21 0.63 No 50 91.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59864617 - NM_032043 BRIP1 0 . . . 5.11 78.07 23 4.79 No 13 0.08 No 0 0 No -22 0.95 Yes 45 42.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68602162 + NM_133509 RAD51B 0 . . . 6.77 93.1 24 5.48 No 36 0.07 No 0 0 No -23 0.81 Yes 50 78 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68537291 + NM_133509 RAD51B 0 . . . 5.05 72.76 23 5.39 No 0 0.43 No 0 0 No -22 0.92 Yes 41 80.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68910405 + NM_133509 RAD51B 0 . . . 3.82 92.64 19 5 No 50 0.4 No 0 0 No -53 0.65 No 42 57.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29115383 - NM_001005735 CHEK2 0 . . . 1.96 65.16 47 6.35 Yes 59 0.55 No 0 0 No -24 0.49 No 47 63.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6019495 - NM_000535 PMS2 0 . . . 5.97 84.3 29 5.46 No 48 1.3 Yes 0 0 No -28 0.76 Yes 50 63.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68478501 + NM_133509 RAD51B 0 . . . 1.77 73.81 32 5.74 Yes 13 0.57 No 0 0 No -28 0.44 No 45 89.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68321322 + NM_133509 RAD51B 0 . . . 1.07 79.13 20 5.52 No 51 -4.54 No 0 0 No -31 0.49 No 48 82.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89733160 + NM_000314 PTEN 0 . . . 1.1 72.86 27 5.74 Yes 61 0.15 No 0 0 No -56 0.75 Yes 42 70.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37094196 + NM_000249 MLH1 0 . . . 6.37 77.14 39 6.32 Yes 29 0.55 No 0 0 No -38 0.5 No 44 42.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68492748 + NM_133509 RAD51B 0 . . . 1.68 0 27 5.2 No 12 0.66 No 0 0 No -54 0.95 Yes 33 71.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108094351 + NM_000051 ATM 0 . . . 6.55 73.08 30 6.4 Yes 67 -3.85 No 0 0 No -23 0.92 Yes 37 77.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47712352 + NM_000251 MSH2 0 . . . 0.03 64.76 30 6.39 Yes 76 -3.36 No 0 0 No -29 0.76 Yes 46 77.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59784671 - NM_032043 BRIP1 0 . . . 1.65 65.11 39 4.75 No 43 0.28 No 0 0 No -38 0.54 No 43 36.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131918421 + NM_005732 RAD50 0 . . . 3.53 74.22 26 5.24 No 35 1.9 Yes 0 0 No -25 0.92 Yes 48 86.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37038066 + NM_000249 MLH1 0 . . . 1.83 62.35 50 7.8 Yes 57 0.76 No 28 0.87 Yes -26 0.92 Yes 49 85.1 Yes BPP: Yes, SVM: No, Branch: Yes, LB: Yes, RNABPS: Yes chr14 68505898 + NM_133509 RAD51B 0 . . . 0.52 76.94 21 5.65 Yes 3 0.16 No 0 0 No -20 0.68 Yes 20 70.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152364169 - NM_005431 XRCC2 0 . . . 0.24 0 42 6.68 Yes 25 0.69 No 0 0 No -41 0.45 No 50 42.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190647014 + NM_000534 PMS1 0 . . . 6.13 78.78 40 7.14 Yes 3 0.64 No 0 0 No -39 0.81 Yes 46 45.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68700145 + NM_133509 RAD51B 0 . . . 5.76 79.58 18 5.49 No 35 1.25 Yes 0 0 No -26 0.75 Yes 44 85.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29137863 - NM_001005735 CHEK2 0 . . . 2.1 76.63 29 5.26 No 26 1.66 Yes 0 0 No -28 0.88 Yes 32 79.47 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84391466 - NM_139076 FAM175A 0 . . . 4.53 71.32 22 5.29 No 24 0.16 No 0 0 No -21 0.91 Yes 56 74.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59761799 - NM_032043 BRIP1 0 . . . 9.97 83.14 121 8.94 Yes 58 0.3 No 0 0 No -26 0.33 No 45 95.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68776125 + NM_133509 RAD51B 0 . . . 1.4 68.85 30 6 Yes 11 0.39 No 0 0 No -29 0.64 No 51 65.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68755117 + NM_133509 RAD51B 0 . . . 0.26 68 17 6.2 Yes 44 0.18 No 0 0 No -16 0.74 Yes 52 38.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94174432 - NM_005591 MRE11 0 . . . 1.29 68.04 20 7.14 Yes 5 0.6 No 0 0 No -19 0.78 Yes 49 37.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90982592 - NM_002485 NBN 0 . . . 2.75 71.83 35 4.71 No 51 0.79 Yes 0 0 No -20 0.52 No 45 65.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105200517 + NM_021930 RINT1 0 . . . 4.57 76.72 38 6.4 Yes 57 -3.39 No 0 0 No -37 0.79 Yes 49 61.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41210150 - NM_007294 BRCA1 0 . . . 3.26 81.72 16 5.66 Yes 45 1.45 Yes 0 0 No -25 0.45 No 50 92.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215619338 - NM_000465 BARD1 0 . . . 4.28 74.36 35 5.3 No 8 0.31 No 0 0 No -34 0.94 Yes 42 95.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68413812 + NM_133509 RAD51B 0 . . . 0.91 65.06 27 4.94 No -2 0.15 No 0 0 No -26 0.42 No 48 73.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108109447 + NM_000051 ATM 0 . . . 2.85 81.65 25 4.9 No 69 0.9 Yes 0 0 No -24 0.71 Yes 47 39.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131899256 + NM_005732 RAD50 0 . . . 0.95 68.06 19 5 No 39 -4.15 No 0 0 No -58 0.53 No 42 70.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59913276 - NM_032043 BRIP1 0 . . . 3.99 0 40 4.31 No 61 0.39 No 0 0 No -30 0.58 No 40 73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68659395 + NM_133509 RAD51B 0 . . . 1.14 0 26 7.04 Yes 40 0.54 No 0 0 No -25 0.87 Yes 49 35.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68895232 + NM_133509 RAD51B 0 . . . 1.09 67.78 23 5.09 No 70 -2.95 No 0 0 No -45 0.74 Yes 45 52.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59788486 - NM_032043 BRIP1 0 . . . 1.21 70.64 27 6.24 Yes 19 0.62 No 0 0 No -26 0.87 Yes 39 70.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68462245 + NM_133509 RAD51B 0 . . . 6.98 71.35 17 5.19 No 19 1.59 Yes 0 0 No -26 0.39 No 39 98.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6030791 - NM_000535 PMS2 0 . . . 4.96 78.7 26 5.66 Yes 41 0.42 No 0 0 No -25 0.48 No 48 88.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23615921 - NM_024675 PALB2 0 . . . 1.87 80.12 50 7.1 Yes 6 1.13 Yes 0 0 No -32 0.74 Yes 52 75.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59889286 - NM_032043 BRIP1 0 . . . 5.42 84.17 41 8.42 Yes 72 0.05 No 0 0 No -40 0.69 Yes 16 41.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47766465 + NM_000251 MSH2 0 . . . 6.68 82.55 16 4.57 No 70 0.96 Yes 0 0 No -45 0.61 No 50 77.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68952670 + NM_133509 RAD51B 0 . . . 1.49 70.21 28 7.2 Yes 58 0.17 No 0 0 No -27 0.77 Yes 47 64.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68857324 + NM_004360 CDH1 0 . . . 3.72 76.72 16 5.1 No 65 1.33 Yes 0 0 No -20 0.65 No 20 97.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69072008 + NM_133509 RAD51B 0 . . . 0.95 65.59 24 5.91 Yes 34 0.08 No 0 0 No -23 0.72 Yes 19 42.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68709006 + NM_133509 RAD51B 0 . . . 4.39 84.55 14 5.47 No 63 0.92 Yes 0 0 No -21 0.26 No 20 20.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131954141 + NM_005732 RAD50 0 . . . 0.29 68.25 22 5 No 72 1.39 Yes 0 0 No -21 0.41 No 17 55.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59875855 - NM_032043 BRIP1 0 . . . 2.14 71.26 17 8.07 Yes 64 1.28 Yes 0 0 No -34 0.06 No 40 94.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68637921 + NM_133509 RAD51B 0 . . . 6.12 75.76 40 8.39 Yes 31 1.32 Yes 0 0 No -39 0.92 Yes 31 68.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68867478 + NM_133509 RAD51B 0 . . . 2.48 71.29 27 6.67 Yes 24 -2.07 No 0 0 No -26 0.79 Yes 48 74.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29106632 - NM_001005735 CHEK2 0 . . . 5.4 69.82 15 5.46 No 67 0.9 Yes 0 0 No -23 0.83 Yes 45 42.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105192816 + NM_021930 RINT1 0 . . . 3.98 74.74 35 4.46 No 33 0.65 No 0 0 No -30 0.9 Yes 41 52.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68430601 + NM_133509 RAD51B 0 . . . 0.68 62.87 13 4.36 No 22 1.19 Yes 0 0 No -60 0.43 No 36 70.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59887138 - NM_032043 BRIP1 0 . . . 1.83 69.51 33 6.16 Yes 70 -3.59 No 0 0 No -32 0.89 Yes 50 53.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41266499 - NM_007294 BRCA1 0 . . . 4.02 76.54 41 6.71 Yes 54 -3.85 No 0 0 No -40 0.46 No 38 60.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94205350 - NM_005591 MRE11 0 . . . 2.42 71.6 19 4.52 No 16 1.22 Yes 0 0 No -18 0.67 Yes 42 58.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68942007 + NM_133509 RAD51B 0 . . . 1.91 70.19 26 4.93 No 42 0.14 No 0 0 No -25 0.45 No 16 34.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190717817 + NM_000534 PMS1 0 . . . 4.39 94.22 107 9.08 Yes 72 -1.58 No 0 0 No -47 0.63 No 18 82.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23632658 - NM_024675 PALB2 0 . . . 2.68 0 26 5.2 No 10 0.96 Yes 0 0 No -25 0.62 No 40 52.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215596804 - NM_000465 BARD1 0 . . . 0.11 68.43 34 5.5 No 3 0.26 No 0 0 No -33 0.55 No 42 58.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59929313 - NM_032043 BRIP1 0 . . . 0.47 56.78 21 5.2 No 60 1.04 Yes 0 0 No -20 0.72 Yes 41 62.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45793996 - NM_001048171 MUTYH 0 . . . 1.06 0 24 6.86 Yes 62 0.63 No 0 0 No -23 0.53 No 39 72.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47740803 + NM_000251 MSH2 0 . . . 1.44 65.86 37 5.37 No 62 -2.71 No 0 0 No -32 0.42 No 45 58.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89672280 + NM_000314 PTEN 0 . . . 4.47 78.97 27 4.97 No 61 0.95 Yes 0 0 No -26 0.4 No 49 72.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68786589 + NM_004360 CDH1 0 . . . 3.11 77.76 48 7.61 Yes 70 -5.53 No 0 0 No -38 0.69 Yes 39 94.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94218994 - NM_005591 MRE11 0 . . . 4.32 68.02 15 4.53 No 55 0.33 No 0 0 No -28 0.58 No 43 69.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68717221 + NM_133509 RAD51B 0 . . . 1.82 75.67 30 7.81 Yes 72 0.39 No 0 0 No -29 0.87 Yes 47 76.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47728642 + NM_000251 MSH2 0 . . . 1.09 69.12 31 5.28 No 50 -1.47 No 0 0 No -30 0.31 No 39 61.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69077614 + NM_133509 RAD51B 0 . . . 9.82 75.84 15 4.59 No 50 0.73 No 0 0 No -30 0.51 No 15 54.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131967346 + NM_005732 RAD50 0 . . . 0.86 60.6 43 6.69 Yes 16 0.35 No 0 0 No -26 0.33 No 41 77.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59839475 - NM_032043 BRIP1 0 . . . 1.94 69.58 62 8.22 Yes 60 0.96 Yes 0 0 No -26 0.69 Yes 18 51.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94187042 - NM_005591 MRE11 0 . . . 4.28 0 28 5.48 No 73 0.52 No 0 0 No -27 0.88 Yes 50 46.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6023549 - NM_000535 PMS2 0 . . . 0.09 74.68 17 5.48 No 4 0.41 No 0 0 No -23 0.71 Yes 54 80.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89639267 + NM_000314 PTEN 0 . . . 2.73 79.93 28 7.21 Yes 7 1.16 Yes 0 0 No -27 0.49 No 51 76.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68382552 + NM_133509 RAD51B 0 . . . 5.17 78.35 28 7.15 Yes 27 1.07 Yes 0 0 No -27 0.89 Yes 44 79.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47787450 + NM_000251 MSH2 0 . . . 4.73 72.91 42 6.48 Yes 58 -2.31 No 0 0 No -41 0.57 No 47 69.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94200058 - NM_005591 MRE11 0 . . . 5.49 70 16 5.5 No 67 0.75 No 0 0 No -22 0.36 No 50 75.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68830552 + NM_004360 CDH1 0 . . . 5.36 74.68 16 3.75 No 15 0.42 No 0 0 No -24 0.3 No 43 75.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68386019 + NM_133509 RAD51B 0 . . . 2.93 62.4 10 5 No 30 -2.51 No 0 0 No -22 0.34 No 39 23.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131956428 + NM_005732 RAD50 0 . . . 7.82 88.73 17 6.08 Yes 5 0.79 Yes 0 0 No -30 0.59 No 46 74.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108220462 + NM_000051 ATM 0 . . . 0.13 80.02 25 4.02 No 26 -4.08 No 0 0 No -21 0.55 No 53 32.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37067395 + NM_000249 MLH1 0 . . . 0.78 76.38 29 6.38 Yes -3 0.49 No 0 0 No -28 0.9 Yes 49 34.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152371251 - NM_005431 XRCC2 0 . . . 0.79 58.7 19 4.75 No 31 0.58 No 0 0 No -25 0.92 Yes 27 80.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68301911 + NM_133509 RAD51B 0 . . . 4.76 81.04 23 5.38 No 65 1.57 Yes 0 0 No -26 0.73 Yes 40 89.51 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37077939 + NM_000249 MLH1 0 . . . 1.49 83.13 25 5.39 No 69 -4.65 No 0 0 No -22 0.74 Yes 40 61.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68852216 + NM_004360 CDH1 0 . . . 5.71 83.96 30 3.93 No 9 0.39 No 0 0 No -29 0.92 Yes 49 77.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68905414 + NM_133509 RAD51B 0 . . . 3.51 76.53 37 5.73 Yes 28 0.83 Yes 0 0 No -26 0.83 Yes 44 75.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68856466 + NM_004360 CDH1 0 . . . 3.82 74.25 16 5.17 No NA NA NA 0 0 No -22 0.47 No 47 59.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37033970 + NM_000249 MLH1 0 . . . 5.51 78.92 16 3.97 No 58 -2.69 No 0 0 No -34 0.54 No 42 47.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68773389 + NM_133509 RAD51B 0 . . . 2.46 63.84 17 4.8 No 39 1.13 Yes 0 0 No -38 0.27 No 38 90.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1210366 + NM_000455 STK11 0 . . . 2.51 77.58 28 5.37 No 25 0.75 No 0 0 No -26 0.67 Yes 45 62.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68666206 + NM_133509 RAD51B 0 . . . 2.08 0 29 5.88 Yes 75 1.2 Yes 0 0 No -28 0.5 No 46 42.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69017253 + NM_133509 RAD51B 0 . . . 4.24 68.09 23 5.13 No 63 0.43 No 0 0 No -26 0.59 No 38 66.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69002524 + NM_133509 RAD51B 0 . . . 5.27 80.34 24 5.48 No -4 1.19 Yes 0 0 No -23 0.83 Yes 50 48.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94195140 - NM_005591 MRE11 0 . . . 4.42 84.22 26 5.51 No 8 1.13 Yes 0 0 No -19 0.65 No 50 93.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68872497 + NM_133509 RAD51B 0 . . . 4.32 74.99 19 4.62 No 56 0.18 No 0 0 No -18 0.59 No 28 38.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190660704 + NM_000534 PMS1 0 . . . 4.51 73.2 42 6.93 Yes 62 0.58 No 0 0 No -41 0.57 No 46 47.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68607303 + NM_133509 RAD51B 0 . . . 4.52 71.43 41 6.52 Yes 10 0.4 No 0 0 No -28 0.58 No 31 82.38 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6040477 - NM_000535 PMS2 0 . . . 1.38 68.06 14 5.19 No 47 0.72 No 0 0 No -13 0.34 No 48 67.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59881206 - NM_032043 BRIP1 0 . . . 4.2 76.18 42 6.35 Yes 15 0.66 No 0 0 No -23 0.79 Yes 43 93.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190675688 + NM_000534 PMS1 0 . . . 1.44 68.83 28 5.18 No 72 -5.67 No 0 0 No -27 0.7 Yes 42 34.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56790642 + NM_058216 RAD51C 0 . . . 5.2 81.44 26 6.4 Yes 57 0.52 No 0 0 No -25 0.84 Yes 47 91.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89731547 + NM_000314 PTEN 0 . . . 1.33 0 28 4.66 No 17 0.82 Yes 0 0 No -50 0.77 Yes 53 61.49 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108150024 + NM_000051 ATM 0 . . . 0.63 79.09 9 3.65 No 31 0.12 No 0 0 No -32 0.48 No 47 36.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131966092 + NM_005732 RAD50 0 . . . 3.89 79.87 43 6.63 Yes 11 0.77 Yes 0 0 No -31 0.54 No 47 41.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105202028 + NM_021930 RINT1 0 . . . 1.36 79.27 29 6.94 Yes 55 0.25 No 0 0 No -28 0.67 Yes 46 84.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47655122 + NM_000251 MSH2 0 . . . 3.14 71.87 25 5 No 46 0.96 Yes 0 0 No -27 0.85 Yes 39 75.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68782925 + NM_004360 CDH1 0 . . . 5.75 77.63 16 4.69 No 7 1.16 Yes 0 0 No -42 0.56 No 43 52.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47701219 + NM_000251 MSH2 0 . . . 7.24 85.24 48 5.73 Yes 10 0.97 Yes 0 0 No -29 0.66 Yes 41 61.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89663193 + NM_000314 PTEN 0 . . . 6.26 85.99 30 5.39 No 15 0.36 No 0 0 No -22 0.54 No 43 81.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105188040 + NM_021930 RINT1 0 . . . 0.64 74.7 15 3.98 No 63 -4.95 No 0 0 No -29 0.26 No 45 60.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105185244 + NM_021930 RINT1 0 . . . 0.34 63.63 17 4 No 28 0.58 No 0 0 No -30 0.63 No 21 29.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68536013 + NM_133509 RAD51B 0 . . . 11.35 83.28 23 4.8 No 76 -1.73 No 0 0 No -20 0.69 Yes 16 74.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68555271 + NM_133509 RAD51B 0 . . . 2.52 72.8 20 5.1 No 22 0.72 No 0 0 No -31 0.22 No 43 77.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32970803 + NM_000059 BRCA2 0 . . . 6.91 91.61 21 6.98 Yes 71 0.21 No 0 0 No -29 0.38 No 48 72.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104175034 - NM_001100119 XRCC3 0 . . . 5.27 74.1 15 5.66 Yes 13 0.66 No 33 0.63 Yes -27 0.57 No 45 70.24 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr14 68761031 + NM_133509 RAD51B 0 . . . 5.37 85.96 54 7.63 Yes 19 0.63 No 0 0 No -29 0.81 Yes 43 71.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47757507 + NM_000251 MSH2 0 . . . 2.04 69.08 25 5.39 No 54 -3.53 No 0 0 No -22 0.76 Yes 43 53.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68421104 + NM_133509 RAD51B 0 . . . 1.88 0 31 4.73 No 49 0.95 Yes 0 0 No -27 0.28 No 52 55.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105205394 + NM_021930 RINT1 0 . . . 0.05 0 23 6.06 Yes 54 -3.37 No 0 0 No -22 0.82 Yes 26 63.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108224086 + NM_000051 ATM 0 . . . 0.42 74.73 11 4.12 No 33 1.02 Yes 0 0 No -31 0.83 Yes 25 47.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131937686 + NM_005732 RAD50 0 . . . 1.74 58.05 18 4.24 No 72 -3.6 No 0 0 No -17 0.68 Yes 38 39.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68827383 + NM_004360 CDH1 0 . . . 0.72 66.38 33 6.08 Yes 73 0.45 No 0 0 No -32 0.88 Yes 45 54.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68663492 + NM_133509 RAD51B 0 . . . 0.8 62.65 17 4.69 No 36 0.47 No 0 0 No -16 0.52 No 22 74.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37071102 + NM_000249 MLH1 0 . . . 3.64 68.89 22 5.29 No 24 0.73 No 0 0 No -21 0.87 Yes 48 76.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68330597 + NM_133509 RAD51B 0 . . . 2.78 74.97 34 5.2 No 0 0.1 No 0 0 No -57 0.59 No 58 47.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59919026 - NM_032043 BRIP1 0 . . . 0.27 66.91 29 5.48 No 28 -2.95 No 0 0 No -28 0.92 Yes 50 59.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108189605 + NM_000051 ATM 0 . . . 8.94 83.58 19 4.8 No 54 0.14 No 0 0 No -47 0.34 No 46 62.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69096313 + NM_133509 RAD51B 0 . . . 6.21 0 17 5.6 Yes 29 0.11 No 0 0 No -26 0.68 Yes 38 50.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29132427 - NM_001005735 CHEK2 0 . . . 3.36 72.8 28 5.38 No 22 0.44 No 0 0 No -27 0.47 No 36 76.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84384502 - NM_139076 FAM175A 0 . . . 0.15 63.59 17 6.86 Yes 16 0.44 No 0 0 No -25 0.38 No 42 83.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37035308 + NM_000249 MLH1 0 . . . 0.71 0 17 4.8 No 1 1.13 Yes 21 0.88 Yes -16 0.56 No 57 27.79 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr1 45800504 - NM_001048171 MUTYH 0 . . . 4.14 69 24 4.57 No 12 0.56 No 0 0 No -23 0.78 Yes 46 63.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68577828 + NM_133509 RAD51B 0 . . . 6.87 90.93 20 4.47 No 47 -4.01 No 0 0 No -46 0.34 No 50 70.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68795909 + NM_133509 RAD51B 0 . . . 6.66 86.87 16 4.01 No 6 1.1 Yes 0 0 No -32 0.75 Yes 47 66.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41231395 - NM_007294 BRCA1 0 . . . 0.43 64.35 73 8.23 Yes 23 0.75 No 0 0 No -24 0.78 Yes 44 81.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32940566 + NM_000059 BRCA2 0 . . . 3.23 84.91 14 4.98 No 29 -1.77 No 0 0 No -31 0.7 Yes 46 51.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7570615 - NM_000546 TP53 0 . . . 10.47 80.18 18 4.9 No 17 1.13 Yes 0 0 No -44 0.48 No 47 91.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215600286 - NM_000465 BARD1 0 . . . 2.09 0 31 5.39 No 54 0.03 No 0 0 No -39 0.59 No 43 57.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59785555 - NM_032043 BRIP1 0 . . . 3.35 74.71 31 4.6 No 31 0.23 No 0 0 No -34 0.89 Yes 47 88.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59921727 - NM_032043 BRIP1 0 . . . 2.18 79.23 29 5.44 No 28 1.41 Yes 0 0 No -23 0.84 Yes 53 76.71 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68581318 + NM_133509 RAD51B 0 . . . 2.16 63.91 43 8.18 Yes 13 0.79 Yes 0 0 No -42 0.91 Yes 44 67.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29127164 - NM_001005735 CHEK2 0 . . . 5.31 86.68 10 4 No 2 1.34 Yes 0 0 No -32 0.95 Yes 11 44.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75500104 - NM_001040108 MLH3 0 . . . 3.36 79.65 31 5.45 No 51 -2.55 No 0 0 No -19 0.62 No 48 90.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41023840 + NM_001164269 RAD51 0 . . . 1.97 73.76 21 7.21 Yes 75 -3.51 No 0 0 No -20 0.79 Yes 32 88.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47654832 + NM_000251 MSH2 0 . . . 2.53 69.92 21 4.47 No 76 0.99 Yes 0 0 No -20 0.43 No 49 68.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68615904 + NM_133509 RAD51B 0 . . . 3.44 0 58 7.65 Yes 4 0.73 No 0 0 No -31 0.61 No 45 51.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68512152 + NM_133509 RAD51B 0 . . . 1.52 0 10 5 No 47 0.78 Yes 0 0 No -21 0.75 Yes 42 69.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68816264 + NM_133509 RAD51B 0 . . . 3.74 89.37 20 7.14 Yes 4 1.03 Yes 0 0 No -19 0.72 Yes 54 78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68398321 + NM_133509 RAD51B 0 . . . 2.71 66.46 20 5.08 No 16 0.96 Yes 0 0 No -19 0.49 No 42 91.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47662976 + NM_000251 MSH2 0 . . . 4.31 68.45 48 7.25 Yes 74 1.58 Yes 0 0 No -38 0.7 Yes 50 56.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68855010 + NM_004360 CDH1 0 . . . 1.03 61.75 28 6.24 Yes 1 0.18 No 0 0 No -27 0.88 Yes 22 46.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68848628 + NM_133509 RAD51B 0 . . . 4.93 74.39 41 5.92 Yes 22 0.88 Yes 0 0 No -20 0.86 Yes 36 98.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152367133 - NM_005431 XRCC2 0 . . . 0.56 57.35 45 5.44 No 12 0.73 No 0 0 No -39 0.49 No 46 50.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108118885 + NM_000051 ATM 0 . . . 2.38 68.39 22 5.29 No 57 0.82 Yes 0 0 No -21 0.53 No 41 94.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152360189 - NM_005431 XRCC2 0 . . . 2.53 68.56 36 5.9 Yes 68 1.2 Yes 0 0 No -35 0.78 Yes 49 47.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75514820 - NM_001040108 MLH3 0 . . . 2.56 0 18 5.27 No 37 -3.14 No 0 0 No -18 0.49 No 45 44.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56779487 + NM_058216 RAD51C 0 . . . 1.06 63.4 15 3.78 No 7 1.76 Yes 0 0 No -23 0.84 Yes 51 40.61 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69091498 + NM_133509 RAD51B 0 . . . 1.05 75.24 23 3.76 No 66 -4.44 No 0 0 No -22 0.84 Yes 51 30.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190727372 + NM_000534 PMS1 0 . . . 4.46 74.71 55 7.97 Yes 23 1.31 Yes 0 0 No -27 0.89 Yes 46 61.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68795366 + NM_133509 RAD51B 0 . . . 7.25 77.02 30 3.81 No 8 2.09 Yes 0 0 No -29 0.52 No 50 70.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32948097 + NM_000059 BRCA2 0 . . . 3.91 73.22 36 5.64 Yes 73 1.46 Yes 0 0 No -25 0.45 No 44 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69132047 + NM_133509 RAD51B 0 . . . 2.84 0 36 7.62 Yes 19 0.62 No 0 0 No -25 0.72 Yes 39 95.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108129635 + NM_000051 ATM 0 . . . 4.98 72.59 18 5.84 Yes 20 1.15 Yes 0 0 No -17 0.63 No 38 76.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29083319 - NM_001005735 CHEK2 0 . . . 5.29 75.22 36 5.95 Yes 52 0.98 Yes 0 0 No -25 0.43 No 24 46.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68552531 + NM_133509 RAD51B 0 . . . 12.16 91.47 18 5.37 No 73 -3.24 No 0 0 No -17 0.62 No 45 34.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68304578 + NM_133509 RAD51B 0 . . . 4.44 68.65 15 4.54 No 19 -2.45 No 0 0 No -20 0.67 Yes 44 43.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48011672 + NM_000179 MSH6 0 . . . 0.16 68.34 22 4.88 No 65 0.68 No 0 0 No -21 0.8 Yes 55 27.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108228609 + NM_000051 ATM 0 . . . 0.36 69.92 29 8.05 Yes -4 0.37 No 0 0 No -29 0.74 Yes 54 27.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37073525 + NM_000249 MLH1 0 . . . 0.85 72.32 18 6.07 Yes 14 1.37 Yes 0 0 No -28 0.52 No 44 90.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69009434 + NM_133509 RAD51B 0 . . . 0.74 0 26 5.83 Yes 34 0.75 No 0 0 No -25 0.96 Yes 23 74.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131931951 + NM_005732 RAD50 0 . . . 2.41 68.34 17 5.57 Yes 38 0.94 Yes 0 0 No -26 0.3 No 45 84.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59852250 - NM_032043 BRIP1 0 . . . 4.74 87.6 16 5.83 Yes 62 1.29 Yes 0 0 No -15 0.24 No 42 56.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41235927 - NM_007294 BRCA1 0 . . . 0.09 76.63 20 5.1 No 67 -5.51 No 0 0 No -24 0.73 Yes 43 33.29 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68416270 + NM_133509 RAD51B 0 . . . 0.62 59.73 23 4.31 No 62 0.86 Yes 0 0 No -22 0.71 Yes 47 35.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68983620 + NM_133509 RAD51B 0 . . . 4.35 77.45 29 5.53 No 68 0.63 No 0 0 No -28 0.67 Yes 55 29.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47713215 + NM_000251 MSH2 0 . . . 0.41 61.44 19 5.96 Yes 76 -3.18 No 0 0 No -22 0.7 Yes 30 59.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68847393 + NM_004360 CDH1 0 . . . 0.9 73.97 22 5.27 No 48 0.11 No 0 0 No -39 0.5 No 48 45.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152373703 - NM_005431 XRCC2 0 . . . 3.16 80.53 35 7.14 Yes 59 1.2 Yes 0 0 No -22 0.57 No 54 43.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105190006 + NM_021930 RINT1 0 . . . 0.21 67.99 60 8.16 Yes 33 0.89 Yes 0 0 No -25 0.7 Yes 44 46.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89644723 + NM_000314 PTEN 0 . . . 3.49 74.41 23 5.62 Yes 19 0.52 No 0 0 No -22 0.81 Yes 50 84.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32905184 + NM_000059 BRCA2 0 . . . 1.33 0 19 4.44 No 2 0.84 Yes 0 0 No -18 0.63 No 50 91.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59884526 - NM_032043 BRIP1 0 . . . 0.88 64.49 16 6.4 Yes 31 0.15 No 0 0 No -15 0.44 No 36 41.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6046624 - NM_000535 PMS2 0 . . . 4.05 80.8 42 6.93 Yes 10 0.86 Yes 0 0 No -26 0.6 No 44 70.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6036600 - NM_000535 PMS2 0 . . . 4.29 70 21 5.74 Yes 23 1.47 Yes 0 0 No -32 0.49 No 40 69.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68628023 + NM_133509 RAD51B 0 . . . 7.41 92.41 35 6.24 Yes 65 0.54 No 0 0 No -34 0.93 Yes 44 54.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68304243 + NM_133509 RAD51B 0 . . . 2.82 77.26 41 7.39 Yes 24 0.48 No 0 0 No -40 0.73 Yes 46 48.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23631402 - NM_024675 PALB2 0 . . . 0.98 57.76 13 5.73 Yes 30 1.06 Yes 0 0 No -28 0.35 No 53 67.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68805212 + NM_004360 CDH1 0 . . . 10.02 84.5 16 4.67 No 63 1.65 Yes 0 0 No -23 0.82 Yes 44 82.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41224159 - NM_007294 BRCA1 0 . . . 2.95 70.85 17 6.93 Yes 23 0.85 Yes 0 0 No -42 0.66 No 45 75.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215591167 - NM_000465 BARD1 0 . . . 0.18 77.54 48 4.96 No 68 0.69 No 0 0 No -43 0.65 No 44 59.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69009760 + NM_133509 RAD51B 0 . . . 5.28 78.85 38 6.93 Yes 67 1.13 Yes 0 0 No -24 0.72 Yes 31 30.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32969456 + NM_000059 BRCA2 0 . . . 4.35 0 15 5.28 No 14 0.2 No 0 0 No -28 0.91 Yes 37 53.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32959696 + NM_000059 BRCA2 0 . . . 2.88 78.34 14 5.65 Yes 10 -1.23 No 0 0 No -59 0.42 No 48 45.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32946620 + NM_000059 BRCA2 0 . . . 0.51 77.31 19 5.57 Yes 71 -3.52 No 0 0 No -18 0.72 Yes 52 34.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108206174 + NM_000051 ATM 0 . . . 2.97 78.95 56 7.56 Yes 4 1.27 Yes 0 0 No -22 0.44 No 48 54.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68859064 + NM_133509 RAD51B 0 . . . 0.95 76.35 18 4.58 No 27 -2.08 No 0 0 No -17 0.81 Yes 50 69.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75485428 - NM_001040108 MLH3 0 . . . 7 77.7 18 4.45 No 13 1.13 Yes 0 0 No -17 0.83 Yes 34 57.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90951557 - NM_002485 NBN 0 . . . 3.18 82.31 95 9.64 Yes 54 0.46 No 0 0 No -19 0.62 No 45 59.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56786757 + NM_058216 RAD51C 0 . . . 3.31 80.02 11 4.9 No 69 0.91 Yes 0 0 No -25 0.89 Yes 46 81.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37079718 + NM_000249 MLH1 0 . . . 9.44 84.41 62 8.39 Yes 53 0.95 Yes 0 0 No -32 0.52 No 35 37.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68557903 + NM_133509 RAD51B 0 . . . 4.05 83.46 18 4.7 No 75 -1.86 No 0 0 No -21 0.42 No 43 53.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190743343 + NM_000534 PMS1 0 . . . 1.23 69.86 36 5.91 Yes 18 2.39 Yes 0 0 No -35 0.93 Yes 40 89.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41000982 + NM_001164269 RAD51 0 . . . 1.31 78.8 20 7.14 Yes 24 1.04 Yes 0 0 No -19 0.72 Yes 56 43.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6016295 - NM_000535 PMS2 0 . . . 2.92 89.22 21 6.16 Yes 32 -1.7 No 0 0 No -20 0.68 Yes 49 47.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108134434 + NM_000051 ATM 0 . . . 1.31 81.52 38 7.5 Yes 69 -3.35 No 0 0 No -40 0.7 Yes 53 35.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90968081 - NM_002485 NBN 0 . . . 0.98 64.26 13 5.95 Yes 36 0.02 No 0 0 No -24 0.49 No 22 47.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68638199 + NM_133509 RAD51B 0 . . . 5.2 85.02 32 5.6 Yes 5 1.09 Yes 0 0 No -31 0.47 No 53 75.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32907419 + NM_000059 BRCA2 0 . . . 1.92 70.89 51 6.64 Yes 55 0.37 No 0 0 No -20 0.74 Yes 40 58.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41266065 - NM_007294 BRCA1 0 . . . 5.49 84.51 28 5.2 No 2 0.77 No 0 0 No -27 0.84 Yes 44 59.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190672833 + NM_000534 PMS1 0 . . . 1.31 74.86 33 5.77 Yes 38 0.83 Yes 0 0 No -32 0.52 No 37 78.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68368480 + NM_133509 RAD51B 0 . . . 7.82 84.21 28 5.57 Yes 1 0.88 Yes 0 0 No -28 0.83 Yes 42 45.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69122059 + NM_133509 RAD51B 0 . . . 0.71 0 32 5.66 Yes 58 -3.36 No 0 0 No -31 0.68 Yes 44 91.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68819918 + NM_004360 CDH1 0 . . . 2.05 73.95 33 6.72 Yes 16 -1.9 No 0 0 No -32 0.87 Yes 53 24.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108198184 + NM_000051 ATM 0 . . . 0.33 63.89 28 5.73 Yes 70 -5.44 No 0 0 No -27 0.64 No 59 17.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89677108 + NM_000314 PTEN 0 . . . 3.93 60.74 22 6.47 Yes 45 -4.88 No 0 0 No -43 0.63 No 41 63.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68766369 + NM_133509 RAD51B 0 . . . 7.39 78.08 22 5.2 No 5 0.51 No 0 0 No -28 0.69 Yes 37 40.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94160605 - NM_005591 MRE11 0 . . . 5.91 90.33 21 4.79 No 37 0.48 No 0 0 No -20 0.81 Yes 53 76.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47693481 + NM_000251 MSH2 0 . . . 8.18 84.71 21 4.56 No 0 0.92 Yes 0 0 No -33 0.54 No 52 61.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215626050 - NM_000465 BARD1 0 . . . 2.27 70.19 13 5.55 No 43 0.87 Yes 0 0 No -24 0.71 Yes 15 65.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105180151 + NM_021930 RINT1 0 . . . 0.86 0 22 4.75 No 38 0.96 Yes 0 0 No -21 0.64 No 53 41.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215649411 - NM_000465 BARD1 0 . . . 3.44 68.23 26 5.09 No 53 0.91 Yes 0 0 No -25 0.8 Yes 49 85.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105181402 + NM_021930 RINT1 0 . . . 2.62 83.78 17 4.92 No 67 -1.59 No 0 0 No -26 0.51 No 51 52.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68362257 + NM_133509 RAD51B 0 . . . 4.49 81.65 62 8.73 Yes 10 1.15 Yes 0 0 No -29 0.68 Yes 48 86.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105172508 + NM_021930 RINT1 0 . . . 1.95 0 15 5.09 No 16 0.47 No 0 0 No -23 0.76 Yes 42 75.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190663551 + NM_000534 PMS1 0 . . . 3.34 78.7 32 6.86 Yes 57 0.67 No 0 0 No -31 0.86 Yes 54 44.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68870790 + NM_004360 CDH1 0 . . . 6 69.52 40 7.32 Yes 59 0.64 No 0 0 No -39 0.81 Yes 43 74.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68694617 + NM_133509 RAD51B 0 . . . 2.5 70.21 38 6.5 Yes 16 0.23 No 0 0 No -37 0.74 Yes 33 94.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69048002 + NM_133509 RAD51B 0 . . . 0.66 0 15 5.2 No 11 0.36 No 0 0 No -44 0.37 No 47 74.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68908738 + NM_133509 RAD51B 0 . . . 1.35 72.72 40 6.51 Yes 72 1.58 Yes 0 0 No -25 0.34 No 50 40.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94155180 - NM_005591 MRE11 0 . . . 0.33 63.14 30 5.74 Yes 65 1.82 Yes 0 0 No -24 0.76 Yes 47 65.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94159433 - NM_005591 MRE11 0 . . . 3.39 75.09 23 5.19 No 58 0.92 Yes 0 0 No -22 0.54 No 43 73.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68917810 + NM_133509 RAD51B 0 . . . 7.38 78.09 16 6.78 Yes 9 1.17 Yes 0 0 No -26 0.74 Yes 49 77.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47660729 + NM_000251 MSH2 0 . . . 3.32 59.85 27 5.62 Yes 6 0.46 No 0 0 No -26 0.56 No 52 49.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68564864 + NM_133509 RAD51B 0 . . . 6.57 80.59 19 5.52 No 25 1.75 Yes 0 0 No -28 0.56 No 41 92.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68504940 + NM_133509 RAD51B 0 . . . 0.98 52.92 15 5.1 No 73 0.9 Yes 0 0 No -24 0.69 Yes 35 94.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69109002 + NM_133509 RAD51B 0 . . . 7.28 78.6 70 8.63 Yes 6 0.85 Yes 0 0 No -51 0.64 No 45 66.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7576342 - NM_000546 TP53 0 . . . 1.61 84.22 23 4.74 No 76 1.47 Yes 0 0 No -25 0.53 No 25 39.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68709328 + NM_133509 RAD51B 0 . . . 3.89 72.9 10 4.38 No 13 0.75 No 0 0 No -20 0.41 No 45 88.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89710600 + NM_000314 PTEN 0 . . . 1.4 84.22 36 6.36 Yes 3 0.62 No 0 0 No -35 0.73 Yes 50 67.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68856649 + NM_133509 RAD51B 0 . . . 7.48 78.92 36 6.07 Yes 15 1.21 Yes 0 0 No -35 0.77 Yes 43 57.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68898730 + NM_133509 RAD51B 0 . . . 3.19 76.75 19 5.57 Yes 40 0.89 Yes 0 0 No -44 0.46 No 40 70.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69132690 + NM_133509 RAD51B 0 . . . 2.04 72.72 20 5.89 Yes -3 0.24 No 0 0 No -19 0.84 Yes 49 37.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94221786 - NM_005591 MRE11 0 . . . 7.06 81.03 26 4.01 No 46 0.56 No 0 0 No -25 0.88 Yes 41 60.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94210374 - NM_005591 MRE11 0 . . . 5.31 63.42 32 7.43 Yes 25 0.48 No 0 0 No -31 0.87 Yes 39 59.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108225917 + NM_000051 ATM 0 . . . 3.92 76.38 25 4.86 No 52 0.25 No 0 0 No -24 0.9 Yes 47 60.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68420518 + NM_133509 RAD51B 0 . . . 5.01 77.86 21 4.79 No 71 -1.84 No 0 0 No -23 0.46 No 42 86.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215660374 - NM_000465 BARD1 0 . . . 8.87 84.08 28 6.22 Yes 28 0.91 Yes 0 0 No -27 0.78 Yes 30 47.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68364604 + NM_133509 RAD51B 0 . . . 5.92 82.31 19 4.58 No 60 1.08 Yes 0 0 No -18 0.87 Yes 49 85.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68983079 + NM_133509 RAD51B 0 . . . 0.77 54.99 13 3.83 No 8 0.94 Yes 0 0 No -22 0.73 Yes 43 61.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68611407 + NM_133509 RAD51B 0 . . . 4.71 86.98 29 6.29 Yes 62 1.44 Yes 0 0 No -28 0.8 Yes 43 45.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89726161 + NM_000314 PTEN 0 . . . 3.41 72.3 12 5.39 No 17 1.26 Yes 0 0 No -22 0.59 No 41 55.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108118671 + NM_000051 ATM 0 . . . 1.21 0 20 4.9 No 7 0.89 Yes 0 0 No -19 0.69 Yes 51 38.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68704914 + NM_133509 RAD51B 0 . . . 3.76 89.7 17 6.08 Yes 70 1.04 Yes 0 0 No -28 0.31 No 41 77.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37081155 + NM_000249 MLH1 0 . . . 0.91 56.25 12 5.83 Yes 14 0.47 No 0 0 No -19 0.47 No 34 92.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68865294 + NM_133509 RAD51B 0 . . . 1.48 67.04 32 5.57 Yes 40 1.33 Yes 0 0 No -31 0.66 No 21 50.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68737513 + NM_133509 RAD51B 0 . . . 8.87 85.66 31 5.35 No 11 0.86 Yes 0 0 No -30 0.85 Yes 42 64.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68851603 + NM_133509 RAD51B 0 . . . 4.23 69.75 22 4.98 No 67 1.25 Yes 0 0 No -21 0.93 Yes 42 52.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6048321 - NM_000535 PMS2 0 . . . 0.06 65.35 31 5.26 No 56 -1.82 No 0 0 No -30 0.71 Yes 27 41.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68659909 + NM_133509 RAD51B 0 . . . 0.1 0 20 6.08 Yes 59 0.35 No 0 0 No -32 0.89 Yes 40 72.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68315081 + NM_133509 RAD51B 0 . . . 6.8 75.95 13 4.36 No 11 1.23 Yes 0 0 No -34 0.64 No 47 60.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190659700 + NM_000534 PMS1 0 . . . 1.44 72.99 28 6.13 Yes 21 -2.43 No 0 0 No -32 0.72 Yes 52 44.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190723553 + NM_000534 PMS1 0 . . . 3.64 85.29 15 4.74 No 15 0.8 Yes 0 0 No -27 0.67 Yes 43 91.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131925607 + NM_005732 RAD50 0 . . . 6.18 80.68 21 4.8 No 26 0.41 No 0 0 No -20 0.69 Yes 40 67.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32929470 + NM_000059 BRCA2 0 . . . 0.56 0 40 6.95 Yes 11 0.63 No 0 0 No -39 0.81 Yes 47 59.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190714803 + NM_000534 PMS1 0 . . . 7.14 79.38 27 5.2 No 63 1.68 Yes 0 0 No -27 0.58 No 40 77.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68887937 + NM_133509 RAD51B 0 . . . 2.24 69.02 23 5.37 No 19 1.02 Yes 0 0 No -22 0.9 Yes 39 82.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47667985 + NM_000251 MSH2 0 . . . 3.91 88.55 31 6.08 Yes 73 0.64 No 0 0 No -30 0.88 Yes 19 95.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48013683 + NM_000179 MSH6 0 . . . 0.65 74.73 19 4.9 No 32 0.97 Yes 0 0 No -19 0.18 No 21 34.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47778414 + NM_000251 MSH2 0 . . . 6.97 91.5 14 4.97 No 25 -0.64 No 0 0 No -18 0.41 No 49 42.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215602350 - NM_000465 BARD1 0 . . . 7.6 90.91 23 5.39 No 29 0.94 Yes 0 0 No -22 0.6 No 42 50.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68441360 + NM_133509 RAD51B 0 . . . 3.94 76 26 4.99 No 13 0.09 No 0 0 No -25 0.43 No 45 40.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68348808 + NM_133509 RAD51B 0 . . . 1.29 82.74 34 6.32 Yes 76 1.65 Yes 0 0 No -33 0.6 No 50 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59883618 - NM_032043 BRIP1 0 . . . 0.88 63.5 18 5.26 No 28 0.15 No 0 0 No -21 0.92 Yes 30 79.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105171827 + NM_021930 RINT1 0 . . . 3.15 68.34 11 4.12 No 21 1.71 Yes 0 0 No -23 0.61 No 37 81.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131973410 + NM_005732 RAD50 0 . . . 3.46 79.05 34 7.03 Yes 8 1.19 Yes 0 0 No -33 0.32 No 50 80.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131942952 + NM_005732 RAD50 0 . . . 3.87 90.98 19 4.78 No 60 -4.01 No 0 0 No -21 0.6 No 48 75.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89623261 + NM_000314 PTEN 0 . . . 3.65 77.42 9 4.69 No NA NA NA 0 0 No -20 0.59 No 42 71.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59852724 - NM_032043 BRIP1 0 . . . 3.84 70.41 30 4.55 No 27 1.41 Yes 0 0 No -29 0.9 Yes 31 49.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68775701 + NM_004360 CDH1 0 . . . 1.84 85.37 12 4.69 No 33 1.21 Yes 0 0 No -23 0.5 No 45 68.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56785504 + NM_058216 RAD51C 0 . . . 0.12 61.03 51 7.42 Yes 0 0.79 Yes 0 0 No -27 0.87 Yes 34 36.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69094468 + NM_133509 RAD51B 0 . . . 4.61 82.87 34 5.48 No 11 1.47 Yes 0 0 No -30 0.51 No 47 95.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131951846 + NM_005732 RAD50 0 . . . 4.48 67.09 23 4.58 No -4 0.74 No 0 0 No -25 0.61 No 48 33.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68791375 + NM_133509 RAD51B 0 . . . 0.6 65.28 9 5.1 No 60 -2.33 No 0 0 No -21 0.55 No 20 62.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7565506 - NM_000546 TP53 0 . . . 1.99 75.25 30 5.39 No 47 -3.03 No 0 0 No -24 0.41 No 42 59.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32940464 + NM_000059 BRCA2 0 . . . 2.04 76.42 29 6.89 Yes 43 0.28 No 0 0 No -28 0.9 Yes 46 73.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108162516 + NM_000051 ATM 0 . . . 2.98 71.81 47 5.22 No 64 -1.72 No 0 0 No -42 0.52 No 43 89.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59801882 - NM_032043 BRIP1 0 . . . 1.52 80.08 21 4.76 No 19 0.64 No 0 0 No -42 0.55 No 45 86.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47795554 + NM_000251 MSH2 0 . . . 0.62 56.22 57 7.24 Yes 25 0.04 No 0 0 No -44 0.61 No 25 39.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131948870 + NM_005732 RAD50 0 . . . 0.96 67.85 23 4.84 No 27 1.46 Yes 0 0 No -22 0.56 No 37 44.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94172232 - NM_005591 MRE11 0 . . . 2.93 71.36 19 5 No 17 -3.1 No 0 0 No -18 0.48 No 46 41.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68740802 + NM_133509 RAD51B 0 . . . 4.38 71.37 19 3.49 No -2 0.03 No 0 0 No -23 0.73 Yes 47 77.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105205875 + NM_021930 RINT1 0 . . . 1.68 66.25 15 5.76 Yes 67 1.53 Yes 0 0 No -27 0.29 No 45 69.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152361400 - NM_005431 XRCC2 0 . . . 4.87 69.72 25 7.48 Yes 74 1 Yes 0 0 No -24 0.94 Yes 36 52.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33432978 - NM_002878 RAD51D 0 . . . 0.48 66.99 21 4.97 No 20 1.34 Yes 0 0 No -20 0.58 No 38 91.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68457464 + NM_133509 RAD51B 0 . . . 0.24 74.78 52 6.92 Yes 71 0.7 No 0 0 No -37 0.38 No 42 68.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68496279 + NM_133509 RAD51B 0 . . . 5.24 83.26 45 6.8 Yes 52 0.56 No 0 0 No -44 0.63 No 48 80.85 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108192902 + NM_000051 ATM 0 . . . 1.51 82.29 27 3.54 No 49 -0.58 No 0 0 No -22 0.66 Yes 23 88.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131916837 + NM_005732 RAD50 0 . . . 5.33 93.95 31 5.07 No 3 0.58 No 0 0 No -27 0.41 No 43 57.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108139553 + NM_000051 ATM 0 . . . 1.81 68.53 20 5.61 Yes 76 -5.17 No 0 0 No -23 0.56 No 47 51.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69029716 + NM_133509 RAD51B 0 . . . 6.62 79.65 22 4.67 No NA NA NA 0 0 No -19 0.81 Yes 41 35.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56768033 + NM_058216 RAD51C 0 . . . 0.7 63.15 36 5.26 No 27 0.43 No 0 0 No -30 0.65 No 31 39.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41214411 - NM_007294 BRCA1 0 . . . 5.9 74.98 22 5.29 No 26 1.02 Yes 0 0 No -52 0.6 No 42 65.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68891998 + NM_133509 RAD51B 0 . . . 3.35 83.19 21 4.66 No 3 1.3 Yes 0 0 No -20 0.63 No 47 92.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190718045 + NM_000534 PMS1 0 . . . 2.41 68.34 39 5.49 No 13 0.8 Yes 0 0 No -35 0.75 Yes 40 65.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52438381 - NM_004656 BAP1 0 . . . 1.71 0 27 5.57 Yes 14 0.64 No 0 0 No -26 0.58 No 44 37.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40996678 + NM_001164269 RAD51 0 . . . 3.51 88.04 28 5.38 No 76 1.52 Yes 0 0 No -27 0.55 No 50 55.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68773036 + NM_004360 CDH1 0 . . . 7.8 87.19 52 7.14 Yes 0 1.05 Yes 0 0 No -44 0.42 No 52 52.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108103609 + NM_000051 ATM 0 . . . 2.14 84.41 16 5.04 No 34 1.63 Yes 0 0 No -44 0.43 No 44 83.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47679399 + NM_000251 MSH2 0 . . . 5.6 84.17 17 4.8 No 52 1.4 Yes 0 0 No -16 0.52 No 44 41.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47708117 + NM_000251 MSH2 0 . . . 9.07 79.74 24 4.86 No 69 1.02 Yes 0 0 No -49 0.41 No 25 74.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215628700 - NM_000465 BARD1 0 . . . 0.83 0 27 5.39 No 75 -0.29 No 0 0 No -27 0.63 No 50 35.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68765583 + NM_133509 RAD51B 0 . . . 1.72 72.26 36 6.1 Yes 67 -4.75 No 0 0 No -35 0.55 No 16 25.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131948723 + NM_005732 RAD50 0 . . . 0.08 0 34 6.57 Yes 69 -5.85 No 0 0 No -33 0.87 Yes 46 72.84 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69037462 + NM_133509 RAD51B 0 . . . 2.4 74.35 26 6.99 Yes 24 -1.77 No 0 0 No -25 0.88 Yes 46 34.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68506231 + NM_133509 RAD51B 0 . . . 4.86 85.76 19 4.67 No 48 -3.56 No 0 0 No -21 0.51 No 53 56.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68388579 + NM_133509 RAD51B 0 . . . 1.41 56.21 28 6.78 Yes 32 -0.18 No 0 0 No -24 0.61 No 26 37.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69041269 + NM_133509 RAD51B 0 . . . 4.74 69.65 24 6.8 Yes 47 0.65 No 0 0 No -46 0.42 No 42 74.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108210969 + NM_000051 ATM 0 . . . 5.25 80.13 21 5.94 Yes 20 0.81 Yes 0 0 No -20 0.86 Yes 43 62.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59849154 - NM_032043 BRIP1 0 . . . 3.62 80.12 33 5.13 No 9 1.17 Yes 0 0 No -24 0.47 No 49 81.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6023738 - NM_000535 PMS2 0 . . . 5.09 70.69 16 5.39 No 66 0.41 No 0 0 No -45 0.67 Yes 52 90.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7592364 - NM_000546 TP53 0 . . . 1.38 0 24 5.62 Yes 24 1.23 Yes 0 0 No -28 0.57 No 34 93.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215649465 - NM_000465 BARD1 0 . . . 0.95 75.56 31 5.4 No 67 1.3 Yes 0 0 No -30 0.51 No 53 73.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59790072 - NM_032043 BRIP1 0 . . . 1.23 74.73 30 4.73 No 33 1.14 Yes 0 0 No -29 0.63 No 39 44.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68976658 + NM_133509 RAD51B 0 . . . 0.5 77.19 16 5.95 Yes 48 1.33 Yes 0 0 No -27 0.46 No 46 47.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75503412 - NM_001040108 MLH3 0 . . . 3.31 79.6 28 4.89 No 47 0.18 No 0 0 No -31 0.79 Yes 47 42.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68575046 + NM_133509 RAD51B 0 . . . 3.02 63.13 22 5.29 No 29 -2.29 No 0 0 No -21 0.73 Yes 40 93.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75491554 - NM_001040108 MLH3 0 . . . 2.89 70.45 21 5.95 Yes 74 0.88 Yes 0 0 No -24 0.63 No 45 64.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68788086 + NM_133509 RAD51B 0 . . . 0.28 0 17 4.58 No 18 2.26 Yes 0 0 No -42 0.53 No 19 93.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89649464 + NM_000314 PTEN 0 . . . 4 72.48 52 7.98 Yes 28 -1.55 No 0 0 No -34 0.74 Yes 43 74.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89636527 + NM_000314 PTEN 0 . . . 4.65 73.97 17 4.59 No 63 0.37 No 0 0 No -46 0.47 No 34 38.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48005576 + NM_000179 MSH6 0 . . . 1.16 63.56 21 5 No 50 0.71 No 0 0 No -18 0.48 No 52 40.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68852940 + NM_004360 CDH1 0 . . . 3.6 85.02 31 4.06 No 4 1.05 Yes 0 0 No -31 0.67 Yes 54 69.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23638707 - NM_024675 PALB2 0 . . . 4.42 84.22 20 4.69 No 8 1.13 Yes 0 0 No -19 0.72 Yes 50 90.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1228710 + NM_000455 STK11 0 . . . 0.21 66.48 10 3.72 No 33 0.73 No 0 0 No -29 0.89 Yes 25 20.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68659655 + NM_133509 RAD51B 0 . . . 4.31 75.81 26 5.62 Yes 46 0.41 No 0 0 No -25 0.52 No 37 68.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215631375 - NM_000465 BARD1 0 . . . 3.75 75.32 17 6.6 Yes 75 -5.26 No 0 0 No -28 0.79 Yes 40 77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190667618 + NM_000534 PMS1 0 . . . 5.9 79.85 17 4.16 No 69 -4.53 No 0 0 No -27 0.95 Yes 41 72.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29102231 - NM_001005735 CHEK2 0 . . . 4.82 67.3 102 7 Yes 44 0.02 No 0 0 No -27 0.92 Yes 47 54.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68835240 + NM_133509 RAD51B 0 . . . 3.35 70.27 28 5.83 Yes 67 1.04 Yes 0 0 No -27 0.72 Yes 37 67.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59931184 - NM_032043 BRIP1 0 . . . 1.2 72.48 16 4.9 No 34 0.87 Yes 0 0 No -20 0.81 Yes 38 75.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108130440 + NM_000051 ATM 0 . . . 4.48 78.06 14 4.47 No 7 0.31 No 0 0 No -28 0.61 No 45 70.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7589463 - NM_000546 TP53 0 . . . 0.66 69.04 18 5.52 No 63 -1.36 No 0 0 No -28 0.91 Yes 59 27.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215599784 - NM_000465 BARD1 0 . . . 5.44 71.22 26 6.07 Yes 69 -6.07 No 0 0 No -37 0.56 No 48 54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59851808 - NM_032043 BRIP1 0 . . . 9.3 81.34 22 5.29 No 6 1.75 Yes 0 0 No -21 0.8 Yes 33 87.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32973375 + NM_000059 BRCA2 0 . . . 8.87 83.4 22 3.55 No 8 0.16 No 0 0 No -21 0.71 Yes 50 44.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105190186 + NM_021930 RINT1 0 . . . 4.18 65.21 34 5.28 No 63 0.35 No 0 0 No -29 0.59 No 36 57.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68522237 + NM_133509 RAD51B 0 . . . 0.55 62.1 14 4.9 No 70 -5.63 No 0 0 No -20 0.6 No 47 29.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47743839 + NM_000251 MSH2 0 . . . 5 68.03 23 4.69 No 67 0.06 No 0 0 No -22 0.67 Yes 48 78.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68932974 + NM_133509 RAD51B 0 . . . 0.7 55.35 27 5.2 No 71 0.3 No 0 0 No -26 0.43 No 46 62.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68860584 + NM_004360 CDH1 0 . . . 5.08 86.59 12 4.89 No 36 0.94 Yes 0 0 No -34 0.49 No 44 51.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68760386 + NM_133509 RAD51B 0 . . . 3.32 79.32 38 5.98 Yes 51 1.56 Yes 0 0 No -27 0.4 No 32 88.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68810100 + NM_004360 CDH1 0 . . . 3.81 78.09 20 3.6 No 37 1.34 Yes 0 0 No -36 0.72 Yes 21 86.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131895834 + NM_005732 RAD50 0 . . . 5.1 78.04 20 5.1 No 19 0.5 No 0 0 No -22 0.52 No 52 46.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37051810 + NM_000249 MLH1 0 . . . 3.42 80.12 17 4.8 No 6 1.13 Yes 0 0 No -35 0.56 No 52 64.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69094350 + NM_133509 RAD51B 0 . . . 7.58 84.12 14 4.36 No 22 1.54 Yes 0 0 No -21 0.29 No 40 66.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94202133 - NM_005591 MRE11 0 . . . 7.73 88.52 17 6.43 Yes 3 0.7 No 0 0 No -16 0.52 No 48 64.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108097836 + NM_000051 ATM 0 . . . 3.7 83.94 16 4.69 No 9 1.02 Yes 0 0 No -18 0.7 Yes 49 96.31 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68360786 + NM_133509 RAD51B 0 . . . 0.75 0 29 5.13 No 20 1.22 Yes 0 0 No -28 0.72 Yes 46 44.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29081837 - NM_001005735 CHEK2 0 . . . 11.11 84.67 21 5.66 Yes 75 1.8 Yes 0 0 No -20 0.72 Yes 39 53.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68838266 + NM_133509 RAD51B 0 . . . 0.28 0 30 5.61 Yes 75 -3.71 No 0 0 No -29 0.44 No 54 15.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84397352 - NM_139076 FAM175A 0 . . . 3.02 83.86 25 4.21 No 49 1.33 Yes 0 0 No -22 0.76 Yes 42 75.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23625023 - NM_024675 PALB2 0 . . . 1.86 67.55 26 6.25 Yes 37 0.13 No 0 0 No -25 0.84 Yes 40 63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68724155 + NM_133509 RAD51B 0 . . . 2.69 79.92 22 4.68 No 9 0.24 No 0 0 No -21 0.73 Yes 49 65.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69113504 + NM_133509 RAD51B 0 . . . 9.73 93.1 19 5.38 No 7 1.07 Yes 0 0 No -23 0.5 No 39 73.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52442562 - NM_004656 BAP1 0 . . . 0.59 63.43 19 5 No 60 0.98 Yes 0 0 No -18 0.71 Yes 17 42.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108230350 + NM_000051 ATM 0 . . . 0.1 58.42 21 6.07 Yes 25 0.33 No 0 0 No -27 0.76 Yes 58 37.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68800946 + NM_133509 RAD51B 0 . . . 2.43 60.73 13 4.98 No 45 0.79 Yes 0 0 No -23 0.33 No 35 78.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68855105 + NM_004360 CDH1 0 . . . 0.57 64.86 19 4.3 No 35 -3.73 No 0 0 No -18 0.78 Yes 43 18.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59787714 - NM_032043 BRIP1 0 . . . 4.93 82.82 19 4.74 No 40 0.85 Yes 0 0 No -22 0.77 Yes 42 55.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105180017 + NM_021930 RINT1 0 . . . 4 80.34 16 4.26 No 32 1.13 Yes 0 0 No -61 0.79 Yes 26 40.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68458491 + NM_133509 RAD51B 0 . . . 0.56 64.56 80 8.03 Yes 74 -6.08 No 0 0 No -24 0.32 No 46 38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21986955 - NM_000077 CDKN2A 0 . . . 1.07 0 59 5.92 Yes 69 1.11 Yes 0 0 No -48 0.31 No 33 74.19 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68673150 + NM_133509 RAD51B 0 . . . 0.57 62.65 13 5.38 No 18 0.72 No 0 0 No -25 0.73 Yes 29 63.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6040403 - NM_000535 PMS2 0 . . . 0.79 68.76 19 4.62 No -4 1.55 Yes 0 0 No -18 0.63 No 42 76.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108237669 + NM_000051 ATM 0 . . . 3.11 78.26 37 7.86 Yes 12 -2.25 No 0 0 No -36 0.66 No 47 90.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68428284 + NM_133509 RAD51B 0 . . . 0.96 72.76 10 4 No 69 1.01 Yes 0 0 No -52 0.5 No 44 76.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68351027 + NM_133509 RAD51B 0 . . . 0.61 77.56 26 5.4 No 61 1.68 Yes 0 0 No -25 0.84 Yes 44 33.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41023410 + NM_001164269 RAD51 0 . . . 0.89 60.91 33 5.72 Yes 23 0.72 No 0 0 No -32 0.85 Yes 35 72.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68686087 + NM_133509 RAD51B 0 . . . 3.5 75.2 41 7.41 Yes -3 0.85 Yes 0 0 No -40 0.92 Yes 46 60.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47784249 + NM_000251 MSH2 0 . . . 0.26 66.62 34 6 Yes 41 -3.21 No 0 0 No -20 0.58 No 48 79.52 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68792196 + NM_133509 RAD51B 0 . . . 2.01 82.69 48 7.8 Yes 42 0.74 No 0 0 No -25 0.8 Yes 48 67.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68507127 + NM_133509 RAD51B 0 . . . 5.86 75.63 28 5.14 No 70 1.47 Yes 0 0 No -27 0.85 Yes 29 50.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68652542 + NM_133509 RAD51B 0 . . . 6.19 80.43 16 5.1 No 9 1.72 Yes 0 0 No -19 0.62 No 49 82.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69107092 + NM_133509 RAD51B 0 . . . 2.78 70.75 32 4.62 No 29 0.39 No 0 0 No -22 0.65 No 53 51.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59898118 - NM_032043 BRIP1 0 . . . 1.2 67.36 16 4.93 No 33 1.16 Yes 0 0 No -24 0.82 Yes 25 55.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41279091 - NM_007294 BRCA1 0 . . . 0.65 73.16 15 5.5 No 44 -3.19 No 0 0 No -25 0.43 No 31 59.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69047779 + NM_133509 RAD51B 0 . . . 5.22 85.63 22 4.51 No 7 0.85 Yes 0 0 No -22 0.87 Yes 50 79.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108154821 + NM_000051 ATM 0 . . . 1.25 66.87 32 6.16 Yes 54 1.26 Yes 0 0 No -28 0.57 No 41 59.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105180895 + NM_021930 RINT1 0 . . . 0.85 83.69 18 5.1 No 75 0.94 Yes 0 0 No -34 0.51 No 48 64.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68349995 + NM_133509 RAD51B 0 . . . 9.82 85.31 21 7.21 Yes 73 0.27 No 0 0 No -20 0.73 Yes 46 70.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68521361 + NM_133509 RAD51B 0 . . . 4.58 70.45 56 7.39 Yes 8 0.77 Yes 0 0 No -22 0.52 No 50 91.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90949365 - NM_002485 NBN 0 . . . 4.72 72.18 25 5.4 No 2 1.63 Yes 0 0 No -23 0.42 No 50 69.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68907043 + NM_133509 RAD51B 0 . . . 4.21 73.53 19 4.67 No 54 0.87 Yes 0 0 No -18 0.81 Yes 49 61.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68683476 + NM_133509 RAD51B 0 . . . 6.91 87.47 24 5.48 No 5 0.35 No 0 0 No -23 0.73 Yes 46 78.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108142879 + NM_000051 ATM 0 . . . 1.14 83.52 38 6.39 Yes 37 1.55 Yes 0 0 No -31 0.56 No 31 65.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68617000 + NM_133509 RAD51B 0 . . . 7.51 91.32 22 4.66 No 26 1 Yes 0 0 No -21 0.55 No 41 57.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68875333 + NM_133509 RAD51B 0 . . . 5.75 74.47 12 4.12 No 19 0.11 No 0 0 No -36 0.88 Yes 39 89.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41230714 - NM_007294 BRCA1 0 . . . 1.55 70.29 13 5.3 No 69 -5.27 No 0 0 No -23 0.62 No 53 43.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69071643 + NM_133509 RAD51B 0 . . . 7.02 80.55 18 4.8 No 63 0.68 No 0 0 No -16 0.39 No 42 75.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68986480 + NM_133509 RAD51B 0 . . . 3.96 79.67 22 4.88 No 57 0.74 No 0 0 No -21 0.76 Yes 55 50.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68829884 + NM_004360 CDH1 0 . . . 0.59 62.58 35 5.81 Yes 70 -4.84 No 0 0 No -34 0.45 No 49 36.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41262436 - NM_007294 BRCA1 0 . . . 7.58 85.01 26 5.78 Yes 7 0.76 No 0 0 No -25 0.87 Yes 46 78.76 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94156666 - NM_005591 MRE11 0 . . . 0.48 0 13 4.87 No 11 -0.52 No 0 0 No -52 0.3 No 47 44.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215607091 - NM_000465 BARD1 0 . . . 5.02 81.21 11 4.12 No 23 1 Yes 0 0 No -28 0.75 Yes 48 95.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68542900 + NM_133509 RAD51B 0 . . . 4.35 80.23 14 4.97 No 59 -2.78 No 0 0 No -13 0.23 No 36 79.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59869579 - NM_032043 BRIP1 0 . . . 3.17 69.9 26 5.66 Yes 72 0.47 No 0 0 No -25 0.9 Yes 39 59.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89643090 + NM_000314 PTEN 0 . . . 1.28 68.41 21 4.4 No 34 0.45 No 0 0 No -20 0.91 Yes 49 74.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33433565 - NM_002878 RAD51D 0 . . . 6.49 86.34 32 6.87 Yes 57 1.06 Yes 0 0 No -31 0.79 Yes 46 88.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41020369 + NM_001164269 RAD51 0 . . . 1.16 0 23 5.39 No 71 0.99 Yes 0 0 No -22 0.7 Yes 41 27.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68870802 + NM_004360 CDH1 0 . . . 0.82 0 22 6.57 Yes 71 0.63 No 0 0 No -21 0.58 No 31 67.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32964074 + NM_000059 BRCA2 0 . . . 4.27 82.05 16 5.57 Yes 68 0.69 No 0 0 No -27 0.26 No 40 76.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105194824 + NM_021930 RINT1 0 . . . 4.97 74.85 22 4.69 No 14 0.39 No 0 0 No -24 0.47 No 43 73.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131940855 + NM_005732 RAD50 0 . . . 2.22 86.31 17 3.97 No 33 1.14 Yes 0 0 No -30 0.87 Yes 50 74.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68381210 + NM_133509 RAD51B 0 . . . 3.72 66.61 30 5.23 No 71 0.99 Yes 0 0 No -29 0.3 No 32 69.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33440874 - NM_002878 RAD51D 0 . . . 2.78 76.47 27 6.08 Yes 55 -4.46 No 0 0 No -26 0.9 Yes 49 76.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32951613 + NM_000059 BRCA2 0 . . . 0.87 74.68 41 7.34 Yes 51 0.64 No 0 0 No -27 0.37 No 37 38.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47654684 + NM_000251 MSH2 0 . . . 0.09 74.68 32 5.62 Yes 4 0.41 No 0 0 No -25 0.57 No 54 82.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6019475 - NM_000535 PMS2 0 . . . 6.31 75.7 41 6.42 Yes 13 1.51 Yes 0 0 No -28 0.43 No 45 97.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41205025 - NM_007294 BRCA1 0 . . . 1.77 74.23 25 6.66 Yes 54 0.44 No 0 0 No -24 0.95 Yes 37 60.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59930724 - NM_032043 BRIP1 0 . . . 0.33 71.68 30 6.53 Yes 57 0.08 No 0 0 No -24 0.43 No 61 26.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47699265 + NM_000251 MSH2 0 . . . 4.31 73.14 52 5.74 Yes -1 0.91 Yes 0 0 No -45 0.58 No 44 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105194553 + NM_021930 RINT1 0 . . . 1.89 72.26 29 6.12 Yes 30 1.19 Yes 0 0 No -28 0.77 Yes 28 70.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47736661 + NM_000251 MSH2 0 . . . 6.08 81.68 18 3.7 No 52 -3.18 No 0 0 No -17 0.69 Yes 50 57.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47707671 + NM_000251 MSH2 0 . . . 3.36 80.3 13 4.36 No 5 0.57 No 0 0 No -35 0.58 No 45 43.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32908772 + NM_000059 BRCA2 0 . . . 2 64.36 36 6.9 Yes 57 -4.33 No 0 0 No -39 0.38 No 49 73.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190684579 + NM_000534 PMS1 0 . . . 7.76 91.21 14 4.36 No 9 0.99 Yes 0 0 No -29 0.69 Yes 40 92.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69044431 + NM_133509 RAD51B 0 . . . 2.79 85.88 20 5.1 No 60 0.57 No 0 0 No -23 0.85 Yes 50 71.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68450334 + NM_133509 RAD51B 0 . . . 1.07 66.45 19 5.36 No -3 0.11 No 0 0 No -45 0.68 Yes 51 66.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37063122 + NM_000249 MLH1 0 . . . 1.29 70.14 9 4.9 No 42 0.46 No 0 0 No -19 0.72 Yes 48 57.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68736594 + NM_133509 RAD51B 0 . . . 0.1 65.68 28 5.2 No 57 1.21 Yes 0 0 No -27 0.6 No 23 17.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69052044 + NM_133509 RAD51B 0 . . . 6.77 83.63 28 6.46 Yes 73 0.92 Yes 0 0 No -27 0.74 Yes 43 65.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32975404 + NM_000059 BRCA2 0 . . . 1.13 66.94 15 5.57 Yes 66 1.87 Yes 0 0 No -32 0.44 No 39 53.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56805577 + NM_058216 RAD51C 0 . . . 0.38 76.63 13 5.39 No 67 -4.96 No 0 0 No -26 0.4 No 55 37.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68345855 + NM_133509 RAD51B 0 . . . 5.47 73.42 26 5.2 No 75 -6.53 No 0 0 No -20 0.61 No 51 43.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6019668 - NM_000535 PMS2 0 . . . 4.27 69.03 14 6.27 Yes 10 1.54 Yes 0 0 No -27 0.72 Yes 44 54.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75482227 - NM_001040108 MLH3 0 . . . 2.14 0 35 4.75 No 68 -3.32 No 0 0 No -34 0.73 Yes 57 49.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32974613 + NM_000059 BRCA2 0 . . . 5.6 79.47 28 4.52 No 64 0.94 Yes 0 0 No -26 0.46 No 43 28.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41238695 - NM_007294 BRCA1 0 . . . 3.09 70.2 29 4.75 No 46 1.29 Yes 0 0 No -26 0.87 Yes 46 54.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69127377 + NM_133509 RAD51B 0 . . . 4.3 74.84 17 5.29 No 10 1.54 Yes 0 0 No -27 0.57 No 48 81.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41241961 - NM_007294 BRCA1 0 . . . 3.59 71.2 36 5.85 Yes 38 1.02 Yes 0 0 No -35 0.58 No 52 65.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190708336 + NM_000534 PMS1 0 . . . 4.1 71.76 14 5.55 No 52 1.11 Yes 0 0 No -30 0.64 No 44 38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75518025 - NM_001040108 MLH3 0 . . . 4.03 83.09 36 8.39 Yes 13 0.14 No 0 0 No -35 0.49 No 45 59.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59780805 - NM_032043 BRIP1 0 . . . 0.48 76.61 21 6.14 Yes 64 -5.23 No 0 0 No -20 0.51 No 52 31.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68833498 + NM_133509 RAD51B 0 . . . 3.76 68.3 37 5.7 Yes 52 0.76 No 0 0 No -23 0.85 Yes 43 82.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68985741 + NM_133509 RAD51B 0 . . . 1.72 75.05 16 5.51 No 8 -1.87 No 0 0 No -25 0.77 Yes 45 57.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75499606 - NM_001040108 MLH3 0 . . . 8.58 89.4 17 5.29 No 37 0.9 Yes 0 0 No -21 0.35 No 20 53.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108128886 + NM_000051 ATM 0 . . . 1.87 72.4 28 5.72 Yes 5 0.98 Yes 0 0 No -27 0.73 Yes 48 86.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68332072 + NM_133509 RAD51B 0 . . . 1.08 84.22 31 4.72 No 33 0.87 Yes 0 0 No -30 0.89 Yes 25 61.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29119341 - NM_001005735 CHEK2 0 . . . 2.89 68.34 26 5.46 No 21 1.7 Yes 0 0 No -29 0.65 No 37 72.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6033155 - NM_000535 PMS2 0 . . . 10.85 87.91 12 4.69 No 71 -1.67 No 0 0 No -20 0.54 No 44 82.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68833165 + NM_004360 CDH1 0 . . . 7.29 78.95 35 5.3 No 8 2.07 Yes 0 0 No -34 0.87 Yes 50 90.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59900361 - NM_032043 BRIP1 0 . . . 3.53 83.9 19 6.86 Yes 75 0.13 No 0 0 No -30 0.65 No 50 53.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68732915 + NM_133509 RAD51B 0 . . . 2.95 67.53 24 5.09 No 34 1.18 Yes 0 0 No -23 0.82 Yes 46 53.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69093390 + NM_133509 RAD51B 0 . . . 1.62 72.74 13 4.86 No 56 0.73 No 0 0 No -21 0.89 Yes 47 89.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131966652 + NM_005732 RAD50 0 . . . 2.29 74.41 36 6.4 Yes 71 -5.29 No 0 0 No -35 0.49 No 50 78.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68868510 + NM_004360 CDH1 0 . . . 7.15 81.38 22 5.28 No 14 0.78 Yes 0 0 No -21 0.76 Yes 44 89.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23650832 - NM_024675 PALB2 0 . . . 7.36 93.03 27 6.67 Yes 76 0.95 Yes 0 0 No -26 0.76 Yes 35 88.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68857861 + NM_004360 CDH1 0 . . . 1.53 73.21 19 6.44 Yes 61 -2.94 No 0 0 No -18 0.4 No 33 80.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52433032 - NM_004656 BAP1 0 . . . 0.93 68.8 20 5.57 Yes 2 0.33 No 0 0 No -19 0.68 Yes 44 48.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59909500 - NM_032043 BRIP1 0 . . . 7.62 75.98 31 6.59 Yes 11 1.87 Yes 0 0 No -36 0.29 No 47 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69128882 + NM_133509 RAD51B 0 . . . 5.45 82.24 9 4.77 No 9 0.9 Yes 0 0 No -26 0.44 No 49 92.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68769628 + NM_133509 RAD51B 0 . . . 3.07 75.68 10 4 No 55 0.11 No 0 0 No -27 0.75 Yes 44 90.76 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68530599 + NM_133509 RAD51B 0 . . . 5.01 93.44 27 5.74 Yes 19 0.56 No 0 0 No -27 0.66 No 49 86.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131974754 + NM_005732 RAD50 0 . . . 2.38 83.81 30 5.47 No 22 1.79 Yes 0 0 No -29 0.47 No 26 72.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37066569 + NM_000249 MLH1 0 . . . 3.65 82.25 36 6.84 Yes 6 0.56 No 0 0 No -35 0.97 Yes 48 81.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41216029 - NM_007294 BRCA1 0 . . . 0.56 0 40 5.98 Yes 69 1.33 Yes 0 0 No -34 0.53 No 51 49.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59802928 - NM_032043 BRIP1 0 . . . 4.73 73.87 20 7.14 Yes 37 0.98 Yes 0 0 No -19 0.7 Yes 50 79.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89726321 + NM_000314 PTEN 0 . . . 4.11 72.86 36 5.58 Yes -1 0.31 No 0 0 No -30 0.55 No 37 83.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68494153 + NM_133509 RAD51B 0 . . . 1.03 66.5 16 5.38 No 73 1.08 Yes 0 0 No -24 0.41 No 48 73.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89629956 + NM_000314 PTEN 0 . . . 3.24 75.92 14 4.47 No 72 -2.92 No 0 0 No -22 0.81 Yes 49 58.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108111520 + NM_000051 ATM 0 . . . 4.15 72.23 30 6.4 Yes 72 -5.11 No 0 0 No -29 0.67 Yes 36 59.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75483684 - NM_001040108 MLH3 0 . . . 2.46 67.25 15 4.12 No -2 1.25 Yes 0 0 No -14 0.46 No 48 42.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94160642 - NM_005591 MRE11 0 . . . 9.21 91.19 17 5.29 No 0 0.51 No 0 0 No -16 0.51 No 43 72.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68800732 + NM_004360 CDH1 0 . . . 2.69 68.95 32 4.35 No 59 1.47 Yes 0 0 No -31 0.67 Yes 42 86.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59844013 - NM_032043 BRIP1 0 . . . 1.19 0 29 4.63 No 3 1.13 Yes 0 0 No -29 0.58 No 43 35.24 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56810630 + NM_058216 RAD51C 0 . . . 1.99 80.39 83 9.77 Yes 13 1.58 Yes 0 0 No -26 0.43 No 45 67.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32930025 + NM_000059 BRCA2 0 . . . 1.39 71.48 34 6.42 Yes 52 -2.29 No 0 0 No -33 0.58 No 43 45.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47729193 + NM_000251 MSH2 0 . . . 4.34 75.37 11 4.69 No 53 -2.21 No 0 0 No -50 0.46 No 48 49.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68690914 + NM_133509 RAD51B 0 . . . 2.09 73.61 23 4.9 No 48 1.02 Yes 0 0 No -20 0.5 No 46 74.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68940759 + NM_133509 RAD51B 0 . . . 2.57 74 17 5.47 No 55 0.99 Yes 0 0 No -23 0.89 Yes 50 53.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69076134 + NM_133509 RAD51B 0 . . . 3.03 0 26 5.55 No 27 0.73 No 0 0 No -33 0.69 Yes 47 74.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68528350 + NM_133509 RAD51B 0 . . . 3.35 0 13 5.48 No 14 1.01 Yes 0 0 No -23 0.34 No 33 68.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131969288 + NM_005732 RAD50 0 . . . 10.02 94.82 21 4.77 No 37 1.88 Yes 0 0 No -21 0.68 Yes 39 92.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47694685 + NM_000251 MSH2 0 . . . 1.52 66.46 36 6.93 Yes 16 1.14 Yes 0 0 No -35 0.91 Yes 42 90.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131952763 + NM_005732 RAD50 0 . . . 2.89 70.21 23 4.16 No 46 0.25 No 0 0 No -22 0.78 Yes 43 81.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68431763 + NM_133509 RAD51B 0 . . . 3.1 79.87 28 4.67 No 33 0.31 No 0 0 No -27 0.84 Yes 34 81.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68634225 + NM_133509 RAD51B 0 . . . 7.37 82.11 11 4.12 No 21 0.05 No 0 0 No -26 0.49 No 37 61.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68797065 + NM_004360 CDH1 0 . . . 7.33 74.95 45 4.56 No 15 1.22 Yes 0 0 No -23 0.76 Yes 43 84.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37046167 + NM_000249 MLH1 0 . . . 4.06 69.68 52 4.99 No 16 0.75 No 0 0 No -29 0.69 Yes 42 63.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68832864 + NM_133509 RAD51B 0 . . . 0.1 61.38 16 5.04 No 40 0.88 Yes 0 0 No -19 0.57 No 44 46.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215648151 - NM_000465 BARD1 0 . . . 0.42 74.77 23 5.83 Yes 66 0.9 Yes 0 0 No -22 0.55 No 53 66.74 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215606309 - NM_000465 BARD1 0 . . . 7.53 91.68 15 4.29 No -1 0.36 No 0 0 No -49 0.44 No 46 72.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94151442 - NM_005591 MRE11 0 . . . 0.02 0 37 6.48 Yes 8 0.36 No 0 0 No -36 0.68 Yes 47 42.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69004561 + NM_133509 RAD51B 0 . . . 7.52 75.3 21 4.68 No 50 1.1 Yes 0 0 No -28 0.8 Yes 32 39.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69075762 + NM_133509 RAD51B 0 . . . 9.13 82.22 25 5.81 Yes 9 1.82 Yes 0 0 No -24 0.8 Yes 49 85.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90983326 - NM_002485 NBN 0 . . . 2.66 71.74 17 4.27 No 44 0.65 No 0 0 No -24 0.63 No 49 49.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47660481 + NM_000251 MSH2 0 . . . 3.65 81.06 28 4.8 No 53 2.2 Yes 0 0 No -57 0.79 Yes 58 55.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21993733 - NM_000077 CDKN2A 0 . . . 1.23 61.65 41 5.62 Yes -2 1.29 Yes 0 0 No -40 0.83 Yes 22 60.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68495266 + NM_133509 RAD51B 0 . . . 4.09 77.7 24 7.07 Yes 71 0.1 No 0 0 No -23 0.46 No 36 59.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47683687 + NM_000251 MSH2 0 . . . 7.48 89.97 24 4.39 No 40 1.15 Yes 0 0 No -23 0.81 Yes 41 65.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131951639 + NM_005732 RAD50 0 . . . 6.47 84.44 13 3.99 No 75 0.71 No 0 0 No -49 0.58 No 52 86.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90948778 - NM_002485 NBN 0 . . . 5.47 78.81 19 4.76 No 19 -2.69 No 0 0 No -18 0.55 No 47 43.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41016314 + NM_001164269 RAD51 0 . . . 1.07 66.55 27 5.2 No 52 0.47 No 0 0 No -51 0.6 No 44 58.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152372077 - NM_005431 XRCC2 0 . . . 0.85 0 17 5.36 No 72 -2.88 No 0 0 No -16 0.35 No 52 44.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41209850 - NM_007294 BRCA1 0 . . . 1.68 83.28 17 5.38 No 27 1.45 Yes 0 0 No -25 0.45 No 31 97.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68423331 + NM_133509 RAD51B 0 . . . 0.88 73.19 56 7.4 Yes 6 -2.24 No 0 0 No -38 0.65 No 45 35.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68857995 + NM_004360 CDH1 0 . . . 7.93 88.67 18 6.08 Yes 9 1.14 Yes 0 0 No -17 0.79 Yes 49 88.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21993754 - NM_000077 CDKN2A 0 . . . 1.22 74.96 27 5.07 No 15 -0.22 No 0 0 No -27 0.81 Yes 43 72.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68850355 + NM_133509 RAD51B 0 . . . 2.85 73.04 10 5.2 No 27 0.76 No 0 0 No -20 0.49 No 44 72.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68623603 + NM_133509 RAD51B 0 . . . 2.4 81.99 23 5.39 No 44 0.76 No 0 0 No -22 0.9 Yes 48 84.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68718199 + NM_133509 RAD51B 0 . . . 0.14 0 33 5.61 Yes 30 -4.15 No 0 0 No -14 0.4 No 29 19.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183794 - NM_005591 MRE11 0 . . . 9.57 84.77 22 5.07 No 48 0.62 No 0 0 No -29 0.53 No 49 81.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45804929 - NM_001048171 MUTYH 0 . . . 4.33 85.65 14 4.47 No 17 0.34 No 0 0 No -13 0.45 No 51 79.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108146874 + NM_000051 ATM 0 . . . 6.69 80.5 31 5.83 Yes 58 1.8 Yes 0 0 No -30 0.92 Yes 46 51.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68324896 + NM_133509 RAD51B 0 . . . 3.52 68.7 29 5.82 Yes 19 0.55 No 0 0 No -25 0.29 No 39 79.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190676510 + NM_000534 PMS1 0 . . . 2.47 74.96 26 5.29 No 1 0.18 No 0 0 No -25 0.44 No 24 18.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190717704 + NM_000534 PMS1 0 . . . 5.03 74.2 19 5.83 Yes 44 0.77 Yes 0 0 No -27 0.59 No 50 65.78 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47785037 + NM_000251 MSH2 0 . . . 1.13 77.03 27 6.38 Yes 58 -5.94 No 0 0 No -29 0.69 Yes 52 42.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68764669 + NM_133509 RAD51B 0 . . . 6.86 78.46 17 4.28 No -3 1.82 Yes 0 0 No -27 0.48 No 48 73.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68700877 + NM_133509 RAD51B 0 . . . 4.07 79.92 38 6.05 Yes 3 0.15 No 0 0 No -30 0.88 Yes 55 28.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41013415 + NM_001164269 RAD51 0 . . . 6.22 81.34 23 4.69 No 3 0.43 No 0 0 No -22 0.69 Yes 55 43.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59816954 - NM_032043 BRIP1 0 . . . 1.07 0 15 4.58 No 45 1 Yes 0 0 No -40 0.27 No 42 48.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68557738 + NM_133509 RAD51B 0 . . . 5.54 73.92 29 8.05 Yes 21 0.91 Yes 0 0 No -28 0.93 Yes 46 74.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131939914 + NM_005732 RAD50 0 . . . 6.25 78.56 13 4.11 No 29 0.7 No 0 0 No -17 0.67 Yes 38 75.99 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41207098 - NM_007294 BRCA1 0 . . . 7.24 78.21 18 3.75 No 27 1.33 Yes 0 0 No -27 0.56 No 45 84.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89647522 + NM_000314 PTEN 0 . . . 2.37 0 26 5.39 No 5 0.22 No 0 0 No -26 0.51 No 53 83.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68434850 + NM_133509 RAD51B 0 . . . 6.12 77.42 32 5.56 Yes 11 1.4 Yes 0 0 No -24 0.55 No 47 90.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1221246 + NM_000455 STK11 0 . . . 4.14 75.84 45 7.53 Yes 56 2.04 Yes 0 0 No -44 0.73 Yes 45 61.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68288910 + NM_133509 RAD51B 0 . . . 3.15 0 30 4.8 No 34 0.67 No 0 0 No -19 0.71 Yes 50 81.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190673012 + NM_000534 PMS1 0 . . . 4.9 78.54 28 5.48 No -1 0.04 No 0 0 No -27 0.91 Yes 51 80.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94181934 - NM_005591 MRE11 0 . . . 5.74 85.55 18 5.91 Yes 11 1.05 Yes 0 0 No -17 0.56 No 24 50.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6019459 - NM_000535 PMS2 0 . . . 6.17 89.76 13 5.47 No 29 1.52 Yes 0 0 No -12 0.66 Yes 49 80.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21979403 - NM_000077 CDKN2A 0 . . . 10.86 92.2 10 5.2 No 25 2.02 Yes 0 0 No -22 0.4 No 33 85.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131949898 + NM_005732 RAD50 0 . . . 1.27 53.93 27 5.73 Yes 11 -1.83 No 0 0 No -20 0.79 Yes 53 78.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47804110 + NM_000251 MSH2 0 . . . 3.24 73.22 31 5.82 Yes 17 0.61 No 0 0 No -30 0.36 No 41 85.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108144821 + NM_000051 ATM 0 . . . 6.75 79.43 23 6.48 Yes 50 0.67 No 0 0 No -22 0.91 Yes 44 78.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68912941 + NM_133509 RAD51B 0 . . . 8.42 81.53 22 5.19 No 25 0.38 No 0 0 No -21 0.74 Yes 41 61.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41271181 - NM_007294 BRCA1 0 . . . 5.59 74.96 34 6.14 Yes 4 0.92 Yes 0 0 No -33 0.83 Yes 40 61.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56781025 + NM_058216 RAD51C 0 . . . 7.61 77.09 27 5.24 No 68 -2.8 No 0 0 No -26 0.92 Yes 43 41.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52433315 - NM_004656 BAP1 0 . . . 5.66 69.47 25 5.52 No 29 1.09 Yes 0 0 No -24 0.58 No 29 97.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152375034 - NM_005431 XRCC2 0 . . . 0.62 73.71 27 5.04 No 24 0.42 No 0 0 No -50 0.71 Yes 48 58.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47674786 + NM_000251 MSH2 0 . . . 5 74.78 21 5.13 No 7 0.99 Yes 0 0 No -20 0.28 No 51 74.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68355922 + NM_133509 RAD51B 0 . . . 2.75 65.77 42 6.7 Yes 13 0.78 Yes 0 0 No -22 0.65 No 34 85.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215660552 - NM_000465 BARD1 0 . . . 2.84 78 29 5.83 Yes 5 -2.53 No 0 0 No -28 0.85 Yes 48 59.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68671915 + NM_133509 RAD51B 0 . . . 6.89 88.88 16 6.48 Yes 42 0.94 Yes 0 0 No -32 0.41 No 51 33.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59941320 - NM_032043 BRIP1 0 . . . 0.19 78.26 16 4.47 No 73 -4.61 No 0 0 No -15 0.41 No 50 61.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41230679 - NM_007294 BRCA1 0 . . . 7.42 94.53 37 6.4 Yes 19 1 Yes 0 0 No -24 0.67 Yes 39 82.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6032485 - NM_000535 PMS2 0 . . . 1.21 0 26 6.93 Yes 72 0.29 No 0 0 No -18 0.38 No 53 58.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56805292 + NM_058216 RAD51C 0 . . . 2.26 68.89 17 5.66 Yes 72 -4.24 No 0 0 No -25 0.7 Yes 36 35.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68950372 + NM_133509 RAD51B 0 . . . 4.76 73.23 15 4.58 No 76 0.43 No 0 0 No -14 0.16 No 42 55.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108125586 + NM_000051 ATM 0 . . . 1.87 78.21 15 5.2 No 33 0.59 No 0 0 No -20 0.46 No 42 52.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68761634 + NM_133509 RAD51B 0 . . . 7.33 75.6 13 5.17 No 53 0.74 No 0 0 No -12 0.55 No 28 38.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69076924 + NM_133509 RAD51B 0 . . . 6.06 83.53 43 5.97 Yes 60 1.42 Yes 0 0 No -42 0.52 No 25 91.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47650840 + NM_000251 MSH2 0 . . . 3.58 83.92 19 5.45 No 13 1.69 Yes 0 0 No -25 0.64 No 45 85.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32908128 + NM_000059 BRCA2 0 . . . 1.78 68.18 22 5.19 No 32 0.7 No 0 0 No -21 0.6 No 49 76.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68941681 + NM_133509 RAD51B 0 . . . 2.77 70.96 13 6.22 Yes 9 -1.47 No 0 0 No -27 0.52 No 44 69.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29084087 - NM_001005735 CHEK2 0 . . . 6.48 82.99 15 5.48 No 2 0.84 Yes 0 0 No -26 0.46 No 48 69.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68844655 + NM_133509 RAD51B 0 . . . 1.63 70.12 41 7.68 Yes 22 0.38 No 0 0 No -22 0.88 Yes 44 36.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131979578 + NM_005732 RAD50 0 . . . 1.92 61.59 20 5.1 No 72 1.16 Yes 0 0 No -19 0.8 Yes 43 22.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59788238 - NM_032043 BRIP1 0 . . . 3.31 85.02 21 5.1 No 4 1.05 Yes 0 0 No -20 0.63 No 54 66.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152360002 - NM_005431 XRCC2 0 . . . 1.39 82.04 21 5.2 No 15 0.56 No 0 0 No -20 0.78 Yes 43 85.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108118046 + NM_000051 ATM 0 . . . 5.24 85.96 18 4.43 No 0 0.96 Yes 0 0 No -37 0.63 No 46 82.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68662791 + NM_133509 RAD51B 0 . . . 0.59 67.82 30 5.91 Yes 45 0.73 No 0 0 No -23 0.31 No 52 47.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23613864 - NM_024675 PALB2 0 . . . 10.44 87.64 21 5.14 No 41 1.28 Yes 0 0 No -20 0.77 Yes 21 48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68603968 + NM_133509 RAD51B 0 . . . 3.22 72.75 15 5.15 No 62 -4.15 No 0 0 No -21 0.59 No 49 32.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47769745 + NM_000251 MSH2 0 . . . 2.31 82.45 15 4.58 No 75 -5.25 No 0 0 No -38 0.77 Yes 51 81.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47787755 + NM_000251 MSH2 0 . . . 0.54 64.72 19 4.58 No 8 1.63 Yes 0 0 No -18 0.5 No 46 69.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105202718 + NM_021930 RINT1 0 . . . 1.71 82.22 24 4.48 No 74 -4.75 No 0 0 No -23 0.74 Yes 39 51.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32919576 + NM_000059 BRCA2 0 . . . 0.41 0 9 4.69 No 53 0.52 No 0 0 No -21 0.76 Yes 30 53.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37082017 + NM_000249 MLH1 0 . . . 0.02 67.06 21 5.11 No 21 0.47 No 0 0 No -28 0.52 No 46 97.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105174460 + NM_021930 RINT1 0 . . . 6.48 75.65 19 5 No 49 -3.4 No 0 0 No -24 0.54 No 47 35.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152367058 - NM_005431 XRCC2 0 . . . 9.84 91.02 34 5.88 Yes 17 1.12 Yes 0 0 No -28 0.54 No 41 88.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6037296 - NM_000535 PMS2 0 . . . 4.16 84.55 24 7 Yes -3 0.68 No 0 0 No -23 0.97 Yes 61 55.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59768523 - NM_032043 BRIP1 0 . . . 4.53 67.11 25 5.57 Yes 65 -3.97 No 0 0 No -24 0.57 No 44 80.83 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68890993 + NM_133509 RAD51B 0 . . . 6.83 78.55 26 5.6 Yes 24 1.5 Yes 0 0 No -25 0.5 No 34 82.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68763018 + NM_133509 RAD51B 0 . . . 8.32 75.14 20 4.55 No 41 -1.83 No 0 0 No -35 0.45 No 46 51.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69146129 + NM_133509 RAD51B 0 . . . 2.69 0 22 6.85 Yes 29 1.1 Yes 0 0 No -21 0.97 Yes 46 38.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108187876 + NM_000051 ATM 0 . . . 4.09 88.33 19 5.35 No 34 -3.55 No 0 0 No -22 0.36 No 49 41.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69055166 + NM_133509 RAD51B 0 . . . 5.34 72.54 23 5.15 No 2 1.03 Yes 0 0 No -22 0.67 Yes 15 55.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131965359 + NM_005732 RAD50 0 . . . 1.38 74.64 42 6.75 Yes 10 1.12 Yes 0 0 No -28 0.79 Yes 41 67.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59818110 - NM_032043 BRIP1 0 . . . 1.61 0 16 4.69 No 22 1.36 Yes 0 0 No -31 0.43 No 45 59.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84391231 - NM_139076 FAM175A 0 . . . 2.5 72.36 29 5.39 No -4 0.84 Yes 0 0 No -28 0.92 Yes 20 84.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23644503 - NM_024675 PALB2 0 . . . 6.45 74.75 18 5.56 Yes 8 1.31 Yes 0 0 No -32 0.39 No 44 64.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32939934 + NM_000059 BRCA2 0 . . . 5.77 69.57 61 7.98 Yes 42 1.31 Yes 0 0 No -24 0.75 Yes 53 64.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59765268 - NM_032043 BRIP1 0 . . . 1.08 0 28 5.2 No 8 0.9 Yes 0 0 No -27 0.94 Yes 50 92.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41209687 - NM_007294 BRCA1 0 . . . 3.17 81.8 24 6.4 Yes 6 1.22 Yes 0 0 No -23 0.86 Yes 43 70.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69050875 + NM_133509 RAD51B 0 . . . 4.44 76.99 12 4.84 No 11 1.01 Yes 0 0 No -19 0.61 No 36 60.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21972220 - NM_000077 CDKN2A 0 . . . 1.15 0 17 6.16 Yes 51 0.12 No 0 0 No -38 0.54 No 26 32.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84397008 - NM_139076 FAM175A 0 . . . 2.1 0 33 6.56 Yes 39 1.63 Yes 0 0 No -33 0.79 Yes 19 69.91 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59762434 - NM_032043 BRIP1 0 . . . 4.5 74.96 43 7.41 Yes 13 0.54 No 0 0 No -28 0.63 No 45 78.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23642147 - NM_024675 PALB2 0 . . . 0.32 63.9 41 6.32 Yes 43 1.19 Yes 0 0 No -23 0.52 No 44 58.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94215959 - NM_005591 MRE11 0 . . . 0.58 68.4 14 4.12 No 52 0.05 No 0 0 No -17 0.48 No 48 77.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32933411 + NM_000059 BRCA2 0 . . . 3.45 69.29 27 6.16 Yes 55 0.31 No 0 0 No -26 0.89 Yes 47 53.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108199019 + NM_000051 ATM 0 . . . 4.89 72.13 14 4.36 No 49 0.84 Yes 0 0 No -18 0.71 Yes 14 87.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68729131 + NM_133509 RAD51B 0 . . . 2.71 75.21 16 5.9 Yes 8 1.76 Yes 0 0 No -35 0.69 Yes 50 60.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94185795 - NM_005591 MRE11 0 . . . 0.35 64.44 21 5.95 Yes 46 0.9 Yes 0 0 No -20 0.79 Yes 43 42.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21981875 - NM_000077 CDKN2A 0 . . . 3.84 76.7 17 5.83 Yes 12 0.42 No 0 0 No -30 0.41 No 46 83.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68987423 + NM_133509 RAD51B 0 . . . 0.06 52.64 16 4.6 No 38 1.25 Yes 0 0 No -27 0.81 Yes 38 88.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89624354 + NM_000314 PTEN 0 . . . 9.18 77.59 10 5.2 No 41 1.23 Yes 0 0 No -20 0.42 No 49 76.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152360861 - NM_005431 XRCC2 0 . . . 5.75 81.49 23 4.12 No -1 0.31 No 0 0 No -23 0.52 No 44 64.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68789462 + NM_133509 RAD51B 0 . . . 4.89 73.98 16 4.94 No 67 0.25 No 0 0 No -20 0.83 Yes 39 68.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47730760 + NM_000251 MSH2 0 . . . 4.91 77.41 23 4.74 No 39 -1.73 No 0 0 No -22 0.51 No 44 70.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89719017 + NM_000314 PTEN 0 . . . 2.89 61.95 20 5.57 Yes 23 1.11 Yes 0 0 No -19 0.61 No 35 89.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21969221 - NM_000077 CDKN2A 0 . . . 6.82 80.97 13 4.12 No 55 0.82 Yes 0 0 No -22 0.6 No 41 76.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152353035 - NM_005431 XRCC2 0 . . . 3.67 84 18 7.34 Yes 2 1.5 Yes 0 0 No -34 0.44 No 44 66.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59756157 - NM_032043 BRIP1 0 . . . 3.34 69.62 47 8.06 Yes 5 0.08 No 0 0 No -46 0.73 Yes 45 41.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68877812 + NM_133509 RAD51B 0 . . . 0.93 64.74 13 4.24 No 12 0.9 Yes 0 0 No -23 0.29 No 33 51.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190667696 + NM_000534 PMS1 0 . . . 0.81 0 31 5.48 No 62 -2.75 No 0 0 No -24 0.52 No 40 30.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75490767 - NM_001040108 MLH3 0 . . . 5.87 88.91 15 4.47 No 30 0.81 Yes 0 0 No -38 0.34 No 45 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152347758 - NM_005431 XRCC2 0 . . . 6.72 84.82 47 4.76 No 53 1.05 Yes 0 0 No -32 0.59 No 55 30.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68937869 + NM_133509 RAD51B 0 . . . 0.33 65.23 60 6.68 Yes 61 -5.52 No 0 0 No -29 0.86 Yes 49 65.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68512456 + NM_133509 RAD51B 0 . . . 4.84 86.74 29 5.92 Yes 10 0.44 No 0 0 No -26 0.61 No 48 90.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6017515 - NM_000535 PMS2 0 . . . 1.84 75.74 18 5.68 Yes 76 1.13 Yes 0 0 No -18 0.73 Yes 47 68.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41006580 + NM_001164269 RAD51 0 . . . 8.73 86.99 22 7.21 Yes 26 1.35 Yes 0 0 No -21 0.96 Yes 41 66.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108142783 + NM_000051 ATM 0 . . . 5.12 85.02 26 3.73 No 6 1.26 Yes 0 0 No -22 0.43 No 52 75.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32939702 + NM_000059 BRCA2 0 . . . 1.45 80.12 17 5.33 No 69 0.71 No 0 0 No -19 0.43 No 46 74.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108104773 + NM_000051 ATM 0 . . . 4.03 79.56 20 4.67 No 65 0.52 No 0 0 No -19 0.48 No 40 50.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52440150 - NM_004656 BAP1 0 . . . 0.38 73.04 41 6.56 Yes 25 0.77 No 0 0 No -40 0.71 Yes 33 66.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23639860 - NM_024675 PALB2 0 . . . 0.36 65.82 22 4.31 No 24 1.07 Yes 0 0 No -22 0.68 Yes 55 57.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104181376 - NM_001100119 XRCC3 0 . . . 0.77 68.12 20 5.9 Yes NA NA NA 0 0 No -19 0.73 Yes 47 23.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89621432 + NM_000314 PTEN 0 . . . 1.15 65 28 6.58 Yes 3 0.73 No 0 0 No -27 0.73 Yes 36 68.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131926805 + NM_005732 RAD50 0 . . . 1.93 67.08 17 4.56 No 18 0.73 No 0 0 No -54 0.7 Yes 40 84.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32952703 + NM_000059 BRCA2 0 . . . 6.02 85.94 34 7.59 Yes 21 -2.13 No 0 0 No -28 0.75 Yes 53 75.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68816864 + NM_133509 RAD51B 0 . . . 6.84 75.99 17 5.57 Yes 66 -2.34 No 0 0 No -24 0.77 Yes 52 55.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47711944 + NM_000251 MSH2 0 . . . 1.05 69.54 35 6.08 Yes 32 -3.48 No 0 0 No -34 0.57 No 52 28.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68498304 + NM_133509 RAD51B 0 . . . 1.37 71.93 28 5.38 No 62 -3.35 No 0 0 No -27 0.6 No 42 59.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68916200 + NM_133509 RAD51B 0 . . . 3.64 82.74 54 7.14 Yes 43 1.76 Yes 0 0 No -27 0.6 No 51 85.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7589882 - NM_000546 TP53 0 . . . 6.51 87.39 21 5.45 No 59 0.87 Yes 0 0 No -21 0.68 Yes 46 88.26 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108190070 + NM_000051 ATM 0 . . . 9.92 87.89 23 5 No 48 0.73 No 0 0 No -22 0.41 No 43 73.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68981501 + NM_133509 RAD51B 0 . . . 7.76 85.74 32 5.95 Yes -1 0.05 No 0 0 No -31 0.68 Yes 50 77.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68852821 + NM_133509 RAD51B 0 . . . 7.41 74.2 21 5.2 No 63 1.16 Yes 0 0 No -30 0.68 Yes 46 91.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47764588 + NM_000251 MSH2 0 . . . 1.41 84.22 25 5.08 No 3 0.7 No 0 0 No -24 0.73 Yes 50 56.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68637533 + NM_133509 RAD51B 0 . . . 2.39 60.94 15 5.57 Yes 15 1.13 Yes 0 0 No -32 0.69 Yes 43 71.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215592338 - NM_000465 BARD1 0 . . . 4.19 68.49 30 6.3 Yes -1 0.26 No 0 0 No -29 0.8 Yes 59 51.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68587312 + NM_133509 RAD51B 0 . . . 6.42 78.07 17 4.77 No -2 0.3 No 0 0 No -34 0.2 No 38 34.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94198399 - NM_005591 MRE11 0 . . . 3.49 79.31 14 5.74 Yes 57 1.07 Yes 0 0 No -32 0.48 No 42 86.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68368131 + NM_133509 RAD51B 0 . . . 5.44 81.47 13 5.19 No 8 0.48 No 0 0 No -57 0.48 No 49 55.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68725708 + NM_133509 RAD51B 0 . . . 1.19 0 50 7.12 Yes 5 1.54 Yes 0 0 No -44 0.46 No 53 35.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32891030 + NM_000059 BRCA2 0 . . . 1.56 70.1 32 5.16 No 50 -1.6 No 0 0 No -27 0.62 No 51 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6044101 - NM_000535 PMS2 0 . . . 3.41 70.85 28 7.19 Yes 23 1.6 Yes 0 0 No -27 0.81 Yes 40 72.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6027394 - NM_000535 PMS2 0 . . . 4.27 65.56 17 4.8 No 64 1.07 Yes 0 0 No -26 0.53 No 43 64.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89678536 + NM_000314 PTEN 0 . . . 6.03 76.66 41 7.28 Yes 9 1.04 Yes 0 0 No -40 0.66 Yes 49 89.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190733765 + NM_000534 PMS1 0 . . . 1.7 70.77 22 5.03 No 2 1.38 Yes 0 0 No -21 0.93 Yes 42 82.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 52444896 - NM_004656 BAP1 0 . . . 0.9 67.49 18 5.48 No 51 0.14 No 0 0 No -23 0.63 No 47 32.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32900410 + NM_000059 BRCA2 0 . . . 2.02 67.51 37 6.76 Yes 47 0.55 No 0 0 No -39 0.8 Yes 11 70.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68837419 + NM_004360 CDH1 0 . . . 3.23 86.71 16 3.64 No 33 1.13 Yes 0 0 No -32 0.58 No 50 41.62 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56775997 + NM_058216 RAD51C 0 . . . 0.56 0 15 4.58 No 67 1.55 Yes 0 0 No -22 0.64 No 45 33.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48015810 + NM_000179 MSH6 0 . . . 2.82 72.65 19 6.63 Yes 16 1.08 Yes 0 0 No -37 0.66 Yes 42 89.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190717326 + NM_000534 PMS1 0 . . . 1.4 0 16 5.59 Yes 21 0.48 No 0 0 No -32 0.26 No 37 52.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69114605 + NM_133509 RAD51B 0 . . . 2.99 80.36 33 5.83 Yes 32 1.13 Yes 0 0 No -32 0.39 No 42 47.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23641182 - NM_024675 PALB2 0 . . . 0.69 72.23 13 4.79 No -3 0.02 No 0 0 No -26 0.45 No 45 87.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68639492 + NM_133509 RAD51B 0 . . . 2.13 67.21 14 5.1 No 22 1.6 Yes 0 0 No -26 0.44 No 36 71.63 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68691714 + NM_133509 RAD51B 0 . . . 1.95 57.52 50 7.84 Yes 64 0.94 Yes 0 0 No -49 0.73 Yes 46 53.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190711376 + NM_000534 PMS1 0 . . . 1.78 76.63 29 5.91 Yes 58 -4 No 0 0 No -24 0.82 Yes 47 57.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215632082 - NM_000465 BARD1 0 . . . 2.06 52.25 23 3.86 No 20 0.76 No 0 0 No -22 0.74 Yes 38 79.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68832205 + NM_133509 RAD51B 0 . . . 4.13 65.54 15 3.82 No 47 0.41 No 0 0 No -24 0.33 No 42 65.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68909320 + NM_133509 RAD51B 0 . . . 0.77 68.84 24 4.2 No 52 0.27 No 0 0 No -23 0.69 Yes 48 74.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68405027 + NM_133509 RAD51B 0 . . . 5.69 81.85 25 6.16 Yes 50 1.17 Yes 0 0 No -24 0.85 Yes 35 92.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1204799 + NM_000455 STK11 0 . . . 4.51 75.98 17 5.29 No 55 0.46 No 0 0 No -21 0.42 No 19 57.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23635106 - NM_024675 PALB2 0 . . . 0.09 74.68 18 6.29 Yes 52 1.74 Yes 0 0 No -25 0.41 No 54 88.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108125077 + NM_000051 ATM 0 . . . 0.14 69.08 29 6.68 Yes 68 0.5 No 0 0 No -28 0.93 Yes 61 17.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69017194 + NM_133509 RAD51B 0 . . . 10.1 92.46 18 4.76 No 4 0.47 No 0 0 No -24 0.51 No 51 77.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68656351 + NM_133509 RAD51B 0 . . . 8.16 86.09 51 6.45 Yes 6 1.2 Yes 0 0 No -36 0.62 No 37 40.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37081046 + NM_000249 MLH1 0 . . . 4.98 76.26 28 5.38 No 3 0.08 No 0 0 No -28 0.53 No 44 75.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75504958 - NM_001040108 MLH3 0 . . . 2.99 62.26 30 5.48 No 25 1.73 Yes 0 0 No -21 0.57 No 44 75.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68846973 + NM_133509 RAD51B 0 . . . 6.69 86.99 21 5.43 No 19 0.89 Yes 0 0 No -20 0.63 No 39 95.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68686074 + NM_133509 RAD51B 0 . . . 1.57 67.89 13 4.28 No 64 0.08 No 0 0 No -40 0.88 Yes 48 32.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59807790 - NM_032043 BRIP1 0 . . . 0.85 0 18 3.91 No 40 1.37 Yes 0 0 No -22 0.44 No 18 52.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152361293 - NM_005431 XRCC2 0 . . . 4.16 73.21 25 5.51 No 73 -5.49 No 0 0 No -24 0.75 Yes 50 78.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68498170 + NM_133509 RAD51B 0 . . . 4.91 70.12 18 4.36 No 8 0.04 No 0 0 No -18 0.77 Yes 50 73.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68589999 + NM_133509 RAD51B 0 . . . 2.88 85.66 17 5.67 Yes 9 1.02 Yes 0 0 No -28 0.59 No 49 92.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108138627 + NM_000051 ATM 0 . . . 4.29 81.99 42 6.23 Yes 76 -2.25 No 0 0 No -36 0.63 No 45 61.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6032938 - NM_000535 PMS2 0 . . . 0.75 63.93 29 6.32 Yes -4 0.7 No 0 0 No -28 0.87 Yes 43 58.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23623578 - NM_024675 PALB2 0 . . . 1.5 69.39 69 9.05 Yes 75 -5.48 No 0 0 No -28 0.4 No 36 40.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68714932 + NM_133509 RAD51B 0 . . . 12.51 92.4 29 5.84 Yes 9 0.66 No 0 0 No -32 0.81 Yes 36 69.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90990105 - NM_002485 NBN 0 . . . 2.96 75.87 28 5.39 No 52 -4.57 No 0 0 No -27 0.74 Yes 47 67.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190669011 + NM_000534 PMS1 0 . . . 1.27 70.14 27 5.93 Yes 30 -2.87 No 0 0 No -26 0.57 No 63 20.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68852459 + NM_004360 CDH1 0 . . . 7.55 85.05 12 4.99 No 46 1.29 Yes 0 0 No -51 0.77 Yes 25 66.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59912010 - NM_032043 BRIP1 0 . . . 5.84 89.78 42 6.71 Yes 4 0.31 No 0 0 No -31 0.45 No 42 38.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68389429 + NM_133509 RAD51B 0 . . . 4.04 83.86 18 7.55 Yes 67 0.09 No 0 0 No -26 0.39 No 41 78.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108106228 + NM_000051 ATM 0 . . . 0.73 75.58 25 5.27 No 74 1.03 Yes 0 0 No -24 0.86 Yes 39 73.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68422694 + NM_133509 RAD51B 0 . . . 6.18 78.39 20 4.8 No 64 -4.6 No 0 0 No -19 0.63 No 47 64.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215667451 - NM_000465 BARD1 0 . . . 5.32 74.88 18 4.9 No 54 0.07 No 0 0 No -25 0.62 No 25 51.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6020479 - NM_000535 PMS2 0 . . . 5.18 87.66 24 4.8 No 56 0.88 Yes 0 0 No -23 0.82 Yes 49 50.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47771116 + NM_000251 MSH2 0 . . . 2.67 74.42 12 5.74 Yes 76 0.65 No 0 0 No -45 0.58 No 44 48.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33443651 - NM_002878 RAD51D 0 . . . 0.36 61.05 21 4.47 No 56 1.21 Yes 0 0 No -44 0.52 No 42 57.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59858206 - NM_032043 BRIP1 0 . . . 4.66 73.28 27 4.64 No 48 -4.28 No 0 0 No -26 0.51 No 48 69.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59850095 - NM_032043 BRIP1 0 . . . 2.43 65.88 36 5.9 Yes 16 1.1 Yes 0 0 No -17 0.49 No 42 88.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94223946 - NM_005591 MRE11 0 . . . 1.23 64.84 16 4.69 No 63 -3.4 No 0 0 No -15 0.23 No 43 48.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32952652 + NM_000059 BRCA2 0 . . . 6.1 69.24 36 7.52 Yes 64 -3.26 No 0 0 No -35 0.52 No 36 67.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52444298 - NM_004656 BAP1 0 . . . 0.95 0 21 5.61 Yes NA NA NA 0 0 No -25 0.87 Yes 34 44.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23619094 - NM_024675 PALB2 0 . . . 1.8 68.29 33 6.08 Yes 66 1.08 Yes 0 0 No -32 0.94 Yes 48 39.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90963513 - NM_002485 NBN 0 . . . 4.71 84.17 26 9.74 Yes 38 1.18 Yes 0 0 No -25 0.66 No 19 71.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108174733 + NM_000051 ATM 0 . . . 4.24 70.42 13 4.8 No 9 1.34 Yes 0 0 No -44 0.78 Yes 42 82.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32945344 + NM_000059 BRCA2 0 . . . 1.32 77.17 31 5.48 No 25 0.64 No 0 0 No -31 0.33 No 42 85.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105204769 + NM_021930 RINT1 0 . . . 5.74 82.31 23 4.9 No 9 1.45 Yes 0 0 No -22 0.87 Yes 49 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89713479 + NM_000314 PTEN 0 . . . 3.47 76.63 22 5.68 Yes 58 -3.88 No 0 0 No -21 0.83 Yes 43 49.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68772106 + NM_133509 RAD51B 0 . . . 3.74 0 23 5.2 No 5 1.01 Yes 0 0 No -22 0.9 Yes 53 92.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105172158 + NM_021930 RINT1 0 . . . 8.69 88.86 20 5.02 No 42 -1.21 No 0 0 No -20 0.57 No 48 72.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89621316 + NM_000314 PTEN 0 . . . 0.71 56 34 6.13 Yes 56 1.39 Yes 0 0 No -23 0.61 No 50 49.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68436477 + NM_133509 RAD51B 0 . . . 7.22 81.27 22 6.3 Yes 14 0.59 No 0 0 No -21 0.78 Yes 44 92.63 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68396577 + NM_133509 RAD51B 0 . . . 5.35 79.49 16 4.09 No 64 2.32 Yes 0 0 No -21 0.7 Yes 42 61.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32909368 + NM_000059 BRCA2 0 . . . 1.44 74.68 15 4.58 No 54 0.71 No 0 0 No -46 0.44 No 52 64.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108168726 + NM_000051 ATM 0 . . . 3.64 79.89 48 6.52 Yes 26 0.61 No 0 0 No -25 0.4 No 32 48.09 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68305906 + NM_133509 RAD51B 0 . . . 2.8 75.72 17 5.57 Yes 39 0.83 Yes 0 0 No -24 0.7 Yes 47 69.28 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29089354 - NM_001005735 CHEK2 0 . . . 10 90.16 20 5.18 No 24 0.38 No 0 0 No -53 0.58 No 44 50.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84403431 - NM_139076 FAM175A 0 . . . 0.26 0 52 7.98 Yes -2 0.18 No 25 0.46 Yes -51 0.74 Yes 49 54.31 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr22 29092677 - NM_001005735 CHEK2 0 . . . 4.81 74.3 17 4.16 No 2 1.38 Yes 0 0 No -56 0.33 No 49 54.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68533557 + NM_133509 RAD51B 0 . . . 3.54 80.03 30 6.48 Yes 64 -1.37 No 0 0 No -29 0.54 No 16 37.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68286644 + NM_133509 RAD51B 0 . . . 11.08 82.4 36 5.99 Yes 11 1.25 Yes 0 0 No -35 0.74 Yes 47 95.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59754992 - NM_032043 BRIP1 0 . . . 6.19 78.99 25 5.36 No 2 1.03 Yes 0 0 No -57 0.74 Yes 41 47.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215602387 - NM_000465 BARD1 0 . . . 1.4 62.43 24 5.03 No 15 0.61 No 0 0 No -23 0.49 No 40 60.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59885743 - NM_032043 BRIP1 0 . . . 5.46 72 25 7.32 Yes 15 0.37 No 0 0 No -27 0.73 Yes 43 91.83 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41004582 + NM_001164269 RAD51 0 . . . 0.42 61.85 15 5.19 No 45 -4.24 No 0 0 No -26 0.42 No 45 42.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32898497 + NM_000059 BRCA2 0 . . . 4.05 82.16 35 6.4 Yes 54 -4.04 No 0 0 No -34 0.78 Yes 52 67.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68500319 + NM_133509 RAD51B 0 . . . 0.87 69.71 9 5.1 No 53 -2.17 No 0 0 No -27 0.55 No 50 51.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68792007 + NM_133509 RAD51B 0 . . . 1.09 71.35 25 5.34 No 36 -3.97 No 0 0 No -22 0.84 Yes 49 74.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68665332 + NM_133509 RAD51B 0 . . . 6.86 83.71 24 4.98 No 42 0.91 Yes 0 0 No -23 0.57 No 44 89.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89728882 + NM_000314 PTEN 0 . . . 0.86 0 21 5.46 No 76 0.1 No 0 0 No -20 0.51 No 18 89.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32939349 + NM_000059 BRCA2 0 . . . 5.65 77.8 12 4.24 No 50 0.23 No 0 0 No -31 0.84 Yes 42 61.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68478880 + NM_133509 RAD51B 0 . . . 5.58 68.85 12 4.24 No 26 0.62 No 0 0 No -33 0.79 Yes 48 36.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32927354 + NM_000059 BRCA2 0 . . . 3.71 0 37 6.15 Yes 70 1.09 Yes 0 0 No -37 0.45 No 55 75.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41197705 - NM_007294 BRCA1 0 . . . 1.8 0 25 5.39 No 8 -0.33 No 0 0 No -24 0.75 Yes 50 74.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41001513 + NM_001164269 RAD51 0 . . . 6.17 83.44 14 6.23 Yes 0 1.06 Yes 0 0 No -24 0.9 Yes 37 47.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47686892 + NM_000251 MSH2 0 . . . 2.55 74.96 13 4.29 No 8 1.04 Yes 0 0 No -32 0.7 Yes 39 68.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68609802 + NM_133509 RAD51B 0 . . . 9.24 85.32 23 5 No 2 0.51 No 0 0 No -22 0.7 Yes 43 73.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190720602 + NM_000534 PMS1 0 . . . 2.38 73.28 15 5.1 No 56 0.26 No 0 0 No -19 0.36 No 35 47.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68826983 + NM_133509 RAD51B 0 . . . 10.62 88.21 47 6.66 Yes 45 1.17 Yes 0 0 No -36 0.33 No 51 87.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215637931 - NM_000465 BARD1 0 . . . 0.78 67.88 16 5.73 Yes 56 0.96 Yes 0 0 No -23 0.65 No 56 49.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1210832 + NM_000455 STK11 0 . . . 3.63 80.22 20 5.98 Yes 58 -3.88 No 0 0 No -19 0.44 No 48 42.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68853127 + NM_133509 RAD51B 0 . . . 1.16 69.14 30 5.65 Yes -2 0.53 No 0 0 No -29 0.82 Yes 49 46.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59899342 - NM_032043 BRIP1 0 . . . 7.56 85.5 26 4.44 No 34 1.34 Yes 0 0 No -28 0.76 Yes 50 59.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32955485 + NM_000059 BRCA2 0 . . . 1.39 0 16 4.69 No 54 -4.1 No 0 0 No -15 0.31 No 47 51.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68451355 + NM_133509 RAD51B 0 . . . 4.25 72.62 10 4 No 9 1.32 Yes 0 0 No -23 0.67 Yes 49 59.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6027026 - NM_000535 PMS2 0 . . . 4.55 74.98 39 6.16 Yes 76 -4.28 No 0 0 No -31 0.61 No 43 55.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68695166 + NM_133509 RAD51B 0 . . . 4.75 78.85 26 4.82 No 6 0.75 No 0 0 No -21 0.79 Yes 45 45.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68483281 + NM_133509 RAD51B 0 . . . 2.04 72.73 26 5.66 Yes 26 0.22 No 0 0 No -25 0.86 Yes 47 53.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94152913 - NM_005591 MRE11 0 . . . 0.23 68.81 15 5.52 No 38 0.74 No 0 0 No -28 0.31 No 40 32.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89714535 + NM_000314 PTEN 0 . . . 4.87 68.52 19 5 No 69 0.31 No 0 0 No -18 0.7 Yes 37 24.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68899807 + NM_133509 RAD51B 0 . . . 7.82 76.2 20 6.34 Yes 37 0.62 No 0 0 No -24 0.46 No 48 71.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47763687 + NM_000251 MSH2 0 . . . 3.73 76.87 26 5.4 No 22 0.69 No 0 0 No -25 0.54 No 40 60.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68748219 + NM_133509 RAD51B 0 . . . 0.22 63.35 32 5.53 No 66 -5.04 No 0 0 No -35 0.36 No 58 27.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68910973 + NM_133509 RAD51B 0 . . . 3.53 69.13 21 5.67 Yes 74 -2.49 No 0 0 No -20 0.57 No 51 70.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41266597 - NM_007294 BRCA1 0 . . . 3.03 89.95 25 5.39 No 30 0.8 Yes 0 0 No -24 0.92 Yes 51 45.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105172078 + NM_021930 RINT1 0 . . . 5.48 76.15 32 4.66 No 35 -2.99 No 0 0 No -28 0.41 No 40 37.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68729002 + NM_133509 RAD51B 0 . . . 3.34 66.53 20 6.45 Yes 50 -2.08 No 0 0 No -24 0.54 No 35 57.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89658835 + NM_000314 PTEN 0 . . . 3.97 76.81 25 4.85 No 48 0.38 No 0 0 No -25 0.67 Yes 51 64.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68374042 + NM_133509 RAD51B 0 . . . 0.74 0 30 5.81 Yes 68 0.98 Yes 0 0 No -29 0.73 Yes 31 69.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152361496 - NM_005431 XRCC2 0 . . . 2.6 85.85 31 5.97 Yes 49 -1.67 No 0 0 No -30 0.8 Yes 48 73.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69064588 + NM_133509 RAD51B 0 . . . 8.47 91.59 18 4.07 No 18 1.3 Yes 0 0 No -31 0.48 No 40 69.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90995798 - NM_002485 NBN 0 . . . 2.79 64.35 32 5.82 Yes 63 1.47 Yes 0 0 No -31 0.44 No 46 58.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68919664 + NM_133509 RAD51B 0 . . . 0.66 69.53 19 4.85 No -4 0.45 No 0 0 No -23 0.43 No 43 51.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68781593 + NM_004360 CDH1 0 . . . 2.7 74.51 42 6.26 Yes 11 1.2 Yes 0 0 No -38 0.33 No 47 89.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68819868 + NM_133509 RAD51B 0 . . . 6.75 87.35 19 5.64 Yes -4 0.61 No 0 0 No -25 0.38 No 43 92.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32908202 + NM_000059 BRCA2 0 . . . 4.71 64.76 68 8.99 Yes 15 0.7 No 0 0 No -21 0.82 Yes 43 86.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47762419 + NM_000251 MSH2 0 . . . 6.02 73.19 23 6.23 Yes 70 0.46 No 0 0 No -22 0.87 Yes 42 48.2 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47727825 + NM_000251 MSH2 0 . . . 2.28 76.09 28 4.74 No 30 -2.58 No 0 0 No -27 0.25 No 52 70.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84389431 - NM_139076 FAM175A 0 . . . 6.83 93.6 32 8.08 Yes 54 0.99 Yes 0 0 No -31 0.56 No 45 35.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68973827 + NM_133509 RAD51B 0 . . . 5.03 77.75 24 5.63 Yes 43 -3.86 No 0 0 No -23 0.66 No 49 25.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90977178 - NM_002485 NBN 0 . . . 3.6 85.02 37 6.86 Yes 4 1.05 Yes 0 0 No -36 0.5 No 45 88.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56807723 + NM_058216 RAD51C 0 . . . 4.36 78.03 18 4.9 No 20 1.43 Yes 0 0 No -33 0.61 No 38 94.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90966134 - NM_002485 NBN 0 . . . 0.81 71.38 31 3.77 No 40 -4.3 No 0 0 No -23 0.81 Yes 55 34.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68727841 + NM_133509 RAD51B 0 . . . 3.7 77.75 20 6.67 Yes 13 0.4 No 0 0 No -29 0.64 No 45 87.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47770416 + NM_000251 MSH2 0 . . . 10.48 86.44 25 5.57 Yes 71 1.57 Yes 0 0 No -28 0.24 No 48 74.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68455686 + NM_133509 RAD51B 0 . . . 3.33 79.88 21 8 Yes 37 0.49 No 0 0 No -20 0.77 Yes 49 47.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68378665 + NM_133509 RAD51B 0 . . . 0.97 0 32 5.67 Yes 34 0.34 No 0 0 No -31 0.71 Yes 21 44.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108151148 + NM_000051 ATM 0 . . . 2.41 68.08 15 5.2 No 13 1.9 Yes 0 0 No -14 0.31 No 45 89.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89718164 + NM_000314 PTEN 0 . . . 7.28 82.48 18 4.9 No 32 1.4 Yes 0 0 No -26 0.28 No 26 96.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131935640 + NM_005732 RAD50 0 . . . 6.28 74.75 43 6.78 Yes 48 0.86 Yes 0 0 No -43 0.48 No 39 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68537796 + NM_133509 RAD51B 0 . . . 5.98 79.19 16 5.04 No 48 0.81 Yes 0 0 No -20 0.77 Yes 39 65.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47645585 + NM_000251 MSH2 0 . . . 4.39 79.73 24 5.48 No 63 0.42 No 0 0 No -23 0.81 Yes 44 77.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32951421 + NM_000059 BRCA2 0 . . . 3.7 78.15 32 5.47 No -2 0.76 No 0 0 No -31 0.37 No 43 81.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68708403 + NM_133509 RAD51B 0 . . . 7.2 84.02 35 6.83 Yes 12 0.66 No 0 0 No -34 0.94 Yes 46 90.65 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108210221 + NM_000051 ATM 0 . . . 6.74 85.71 13 5.37 No 34 1.1 Yes 0 0 No -21 0.44 No 54 54.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921224 + NM_133509 RAD51B 0 . . . 7.57 84.34 28 5.38 No 9 1.77 Yes 0 0 No -27 0.68 Yes 49 61.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69053425 + NM_133509 RAD51B 0 . . . 2.42 67.12 21 4.62 No 46 0.34 No 0 0 No -27 0.53 No 12 44.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59897421 - NM_032043 BRIP1 0 . . . 5.51 80.77 49 7.68 Yes 72 1.02 Yes 0 0 No -28 0.56 No 15 33.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68731996 + NM_133509 RAD51B 0 . . . 1.66 80.52 21 5.91 Yes 5 0.36 No 0 0 No -20 0.49 No 49 83.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190701152 + NM_000534 PMS1 0 . . . 6.2 74.39 32 9.02 Yes 29 0.09 No 0 0 No -31 0.51 No 44 64.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47794352 + NM_000251 MSH2 0 . . . 6.98 77.42 17 4.8 No 21 0.72 No 0 0 No -16 0.66 No 46 51.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68820652 + NM_133509 RAD51B 0 . . . 4.94 74.51 41 6.23 Yes 63 -5.87 No 0 0 No -33 0.8 Yes 52 61.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68361243 + NM_133509 RAD51B 0 . . . 1.97 85.15 34 6.23 Yes 10 0.1 No 0 0 No -25 0.48 No 52 37.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131903688 + NM_005732 RAD50 0 . . . 0.98 69.37 18 5.72 Yes 37 -3.62 No 0 0 No -28 0.51 No 41 26.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68471021 + NM_133509 RAD51B 0 . . . 0.94 76.63 18 6.24 Yes 58 -3.49 No 0 0 No -33 0.69 Yes 48 77.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215665933 - NM_000465 BARD1 0 . . . 2.55 65.63 24 5.29 No 45 1.06 Yes 0 0 No -23 0.51 No 37 39.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68369071 + NM_133509 RAD51B 0 . . . 0.39 68.46 28 4.7 No 45 0.45 No 0 0 No -28 0.63 No 47 58.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68794583 + NM_133509 RAD51B 0 . . . 4.84 77.36 18 4.9 No 59 -4.61 No 0 0 No -19 0.47 No 43 58.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68453756 + NM_133509 RAD51B 0 . . . 4.95 80.81 15 4.58 No 67 1.57 Yes 0 0 No -57 0.79 Yes 45 82.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89682612 + NM_000314 PTEN 0 . . . 4.03 70 24 4.03 No 30 1.01 Yes 0 0 No -33 0.3 No 37 82.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21966252 - NM_000077 CDKN2A 0 . . . 7.15 81.02 34 5.74 Yes 72 0.88 Yes 0 0 No -23 0.54 No 48 78.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215634775 - NM_000465 BARD1 0 . . . 0.86 60.32 14 4.47 No 42 -3.75 No 0 0 No -44 0.53 No 51 61.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59784136 - NM_032043 BRIP1 0 . . . 0.78 87.15 19 4.69 No 75 -6.08 No 0 0 No -18 0.88 Yes 63 23.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215648471 - NM_000465 BARD1 0 . . . 7.95 82.77 20 4.93 No 24 0.03 No 0 0 No -36 0.53 No 34 79.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89682058 + NM_000314 PTEN 0 . . . 5.86 79.79 29 5.74 Yes 12 0.88 Yes 0 0 No -28 0.84 Yes 46 80.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59889835 - NM_032043 BRIP1 0 . . . 3.69 67.02 34 5.83 Yes 49 0.92 Yes 0 0 No -33 0.65 No 43 95.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215638028 - NM_000465 BARD1 0 . . . 0.21 73.01 18 4.69 No -2 0.34 No 0 0 No -17 0.63 No 45 60.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68723065 + NM_133509 RAD51B 0 . . . 11.46 93.58 13 4.86 No 12 0.31 No 0 0 No -16 0.34 No 46 77.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68473578 + NM_133509 RAD51B 0 . . . 4.19 75.56 52 7.83 Yes 24 1.45 Yes 0 0 No -29 0.52 No 34 85.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68664640 + NM_133509 RAD51B 0 . . . 6.71 84.42 27 6.1 Yes 3 0.6 No 0 0 No -26 0.79 Yes 49 54.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59917152 - NM_032043 BRIP1 0 . . . 10.61 84.85 18 4.78 No 60 0.55 No 0 0 No -41 0.25 No 48 70.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41245401 - NM_007294 BRCA1 0 . . . 0.25 73.2 35 6.36 Yes 29 0.37 No 0 0 No -32 0.66 Yes 29 82.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68539463 + NM_133509 RAD51B 0 . . . 6.89 79.7 17 7.55 Yes 44 0.67 No 0 0 No -33 0.66 No 47 82.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190711481 + NM_000534 PMS1 0 . . . 3.76 72.53 25 4.81 No 18 0.71 No 0 0 No -19 0.32 No 45 83.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131926455 + NM_005732 RAD50 0 . . . 6.35 70.67 22 5.75 Yes 2 1.3 Yes 0 0 No -21 0.54 No 30 58.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33425555 - NM_002878 RAD51D 0 . . . 2.97 79.83 15 5.15 No 66 1.04 Yes 0 0 No -21 0.67 Yes 36 52.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68431554 + NM_133509 RAD51B 0 . . . 2.59 76.09 18 5.92 Yes 8 0.9 Yes 0 0 No -26 0.42 No 50 63.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190711689 + NM_000534 PMS1 0 . . . 2.17 63.37 16 4.69 No 12 1.21 Yes 0 0 No -33 0.68 Yes 42 92.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89631469 + NM_000314 PTEN 0 . . . 2 80.34 24 6.86 Yes 40 1.3 Yes 0 0 No -23 0.91 Yes 18 92.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68683251 + NM_133509 RAD51B 0 . . . 2.78 73.16 45 8.06 Yes 47 0.49 No 0 0 No -33 0.43 No 50 62.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90993365 - NM_002485 NBN 0 . . . 2.9 74.4 21 5.02 No 16 0.05 No 0 0 No -25 0.64 No 42 71.84 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59784436 - NM_032043 BRIP1 0 . . . 3.75 79.05 12 5.38 No 19 0.7 No 0 0 No -26 0.67 Yes 39 69.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90962084 - NM_002485 NBN 0 . . . 5.18 81.87 15 5.42 No -2 0.45 No 0 0 No -31 0.33 No 44 79.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108092244 + NM_000051 ATM 0 . . . 1.04 70.02 29 5.88 Yes 16 1.16 Yes 0 0 No -28 0.81 Yes 42 73.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68847492 + NM_133509 RAD51B 0 . . . 3.82 73.07 30 5.46 No 4 1.14 Yes 0 0 No -29 0.61 No 45 79.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32938101 + NM_000059 BRCA2 0 . . . 3 73.91 35 5.96 Yes 63 0.34 No 0 0 No -34 0.55 No 34 68.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108232013 + NM_000051 ATM 0 . . . 0.58 67.2 29 5.29 No 70 -4.52 No 0 0 No -23 0.78 Yes 27 41.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68697313 + NM_133509 RAD51B 0 . . . 1.19 61.14 26 6.31 Yes 76 -4.86 No 0 0 No -25 0.71 Yes 41 66.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69128556 + NM_133509 RAD51B 0 . . . 1.36 0 15 4.05 No 32 1.45 Yes 0 0 No -28 0.32 No 26 61.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48006967 + NM_000179 MSH6 0 . . . 1.25 73.53 15 4.69 No 49 0.64 No 0 0 No -20 0.73 Yes 40 94.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68377798 + NM_133509 RAD51B 0 . . . 5.5 71.34 37 7.2 Yes 13 0.83 Yes 0 0 No -36 0.96 Yes 45 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89638828 + NM_000314 PTEN 0 . . . 4.02 65.97 36 4.56 No 59 0.67 No 0 0 No -28 0.45 No 25 56.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215593306 - NM_000465 BARD1 0 . . . 7.19 79.34 17 6.16 Yes 10 0.86 Yes 0 0 No -31 0.78 Yes 48 54.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90962588 - NM_002485 NBN 0 . . . 3.91 75.08 46 6.74 Yes 43 -4.31 No 0 0 No -20 0.66 Yes 47 96.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21966154 - NM_000077 CDKN2A 0 . . . 11.79 84.72 19 5.48 No 57 0.97 Yes 0 0 No -26 0.43 No 48 85.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56800774 + NM_058216 RAD51C 0 . . . 0.95 77.35 29 5.48 No 64 -4.76 No 0 0 No -23 0.49 No 46 31.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41005886 + NM_001164269 RAD51 0 . . . 2.66 67.07 16 5.48 No 39 0.94 Yes 0 0 No -29 0.7 Yes 43 82.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131947149 + NM_005732 RAD50 0 . . . 0.09 74.68 27 5 No 4 0.41 No 0 0 No -26 0.71 Yes 54 65.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1217838 + NM_000455 STK11 0 . . . 6.11 80.74 28 5.38 No 36 1.56 Yes 0 0 No -27 0.47 No 39 47.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68772875 + NM_004360 CDH1 0 . . . 2.45 0 24 5 No 29 0.39 No 0 0 No -23 0.53 No 31 52.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29137566 - NM_001005735 CHEK2 0 . . . 3.62 68.62 22 5.29 No 15 0.14 No 0 0 No -21 0.86 Yes 49 79.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29119012 - NM_001005735 CHEK2 0 . . . 3.21 80.62 30 5.39 No 36 -3.08 No 0 0 No -25 0.83 Yes 44 58.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68856508 + NM_133509 RAD51B 0 . . . 0.9 79.77 37 7.54 Yes 23 0.78 Yes 0 0 No -26 0.59 No 29 71.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59759134 - NM_032043 BRIP1 0 . . . 5.3 78.39 19 5.28 No 69 -1.82 No 0 0 No -24 0.58 No 53 77.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68606109 + NM_133509 RAD51B 0 . . . 1.05 65.61 20 5.19 No 61 0.77 Yes 0 0 No -19 0.43 No 36 86.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32896648 + NM_000059 BRCA2 0 . . . 0.29 0 20 5.42 No 61 0.86 Yes 0 0 No -20 0.42 No 41 30.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68575378 + NM_133509 RAD51B 0 . . . 7.42 87.59 28 5.29 No 11 0.77 No 0 0 No -27 0.87 Yes 47 69.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69111977 + NM_133509 RAD51B 0 . . . 4.12 81.55 69 8.22 Yes 43 -1.93 No 0 0 No -31 0.81 Yes 50 76.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68935199 + NM_133509 RAD51B 0 . . . 4.05 80.35 51 7.71 Yes 73 -5.5 No 0 0 No -21 0.33 No 53 50.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68794605 + NM_004360 CDH1 0 . . . 3.6 0 30 4.92 No 33 0.56 No 0 0 No -29 0.9 Yes 53 73.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75488945 - NM_001040108 MLH3 0 . . . 2.77 79.23 14 4.12 No 56 -5.92 No 0 0 No -24 0.57 No 31 40.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190685531 + NM_000534 PMS1 0 . . . 4.13 87.9 29 6.18 Yes 47 1.19 Yes 0 0 No -28 0.64 No 46 81.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68782951 + NM_133509 RAD51B 0 . . . 2.14 76.49 27 5.46 No 55 0.5 No 0 0 No -26 0.74 Yes 45 47.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68315097 + NM_133509 RAD51B 0 . . . 1.03 70.69 27 4.42 No 27 1.24 Yes 0 0 No -26 0.68 Yes 31 66.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68528371 + NM_133509 RAD51B 0 . . . 8.7 85.36 27 5.65 Yes 35 1.02 Yes 0 0 No -26 0.66 No 47 65.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48008016 + NM_000179 MSH6 0 . . . 1.33 62.78 10 5.2 No 25 0.48 No 0 0 No -22 0.6 No 53 57.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89715828 + NM_000314 PTEN 0 . . . 4.31 80.31 16 5.5 No 3 0.65 No 0 0 No -20 0.44 No 51 62.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190701694 + NM_000534 PMS1 0 . . . 3.9 77 30 6.04 Yes 9 0.46 No 0 0 No -29 0.77 Yes 49 79.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68897616 + NM_133509 RAD51B 0 . . . 6.01 71.1 55 7.68 Yes 22 -2.15 No 0 0 No -54 0.96 Yes 44 70.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69019201 + NM_133509 RAD51B 0 . . . 0.26 0 16 4.69 No 62 -2.79 No 0 0 No -26 0.43 No 31 75.41 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90960458 - NM_002485 NBN 0 . . . 11.25 94.56 17 4.8 No 54 0.77 No 0 0 No -41 0.79 Yes 33 90.9 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89677215 + NM_000314 PTEN 0 . . . 5.54 81.35 18 4.8 No -1 1.04 Yes 0 0 No -40 0.37 No 45 62.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45805427 - NM_001048171 MUTYH 0 . . . 0.73 72.64 12 3.98 No 66 -5.42 No 0 0 No -23 0.82 Yes 54 40.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68433330 + NM_133509 RAD51B 0 . . . 7.14 90.56 18 3.41 No 73 1.65 Yes 0 0 No -25 0.35 No 47 76.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7569280 - NM_000546 TP53 0 . . . 1.85 65.81 12 4.24 No 42 0.55 No 0 0 No -39 0.79 Yes 42 67.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89703130 + NM_000314 PTEN 0 . . . 1.29 68.97 13 5.5 No 23 0.01 No 0 0 No -46 0.38 No 48 73.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215615691 - NM_000465 BARD1 0 . . . 2.85 68.18 13 5.2 No 17 0.95 Yes 0 0 No -28 0.82 Yes 41 88.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37070564 + NM_000249 MLH1 0 . . . 2.83 62.96 42 6.87 Yes -1 1.22 Yes 0 0 No -44 0.76 Yes 37 58.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108142518 + NM_000051 ATM 0 . . . 3.14 82.92 16 5.1 No -2 0.71 No 0 0 No -43 0.81 Yes 52 60.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32937794 + NM_000059 BRCA2 0 . . . 2.35 65.42 16 4.58 No 16 0.69 No 0 0 No -21 0.67 Yes 50 62.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68744300 + NM_133509 RAD51B 0 . . . 0.59 66.94 14 4.47 No 46 0.38 No 0 0 No -17 0.6 No 43 55.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68862431 + NM_133509 RAD51B 0 . . . 1.35 83.45 29 7.01 Yes 74 -3.05 No 0 0 No -28 0.96 Yes 46 51.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68313901 + NM_133509 RAD51B 0 . . . 0.27 0 21 4.51 No 13 1.02 Yes 0 0 No -27 0.91 Yes 24 64.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89681048 + NM_000314 PTEN 0 . . . 9.66 89.4 16 4.57 No NA NA NA 0 0 No -21 0.65 No 43 40.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21982588 - NM_000077 CDKN2A 0 . . . 2.17 67.26 32 6.11 Yes 72 0.27 No 0 0 No -20 0.58 No 45 46.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68815261 + NM_004360 CDH1 0 . . . 12.27 83.29 14 4.47 No 27 1.2 Yes 0 0 No -25 0.61 No 41 76.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41266997 - NM_007294 BRCA1 0 . . . 3.55 0 28 5.39 No 6 0.82 Yes 0 0 No -27 0.6 No 52 86.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108203529 + NM_000051 ATM 0 . . . 1.96 75.95 18 4.8 No 53 1.14 Yes 0 0 No -20 0.42 No 46 77.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37046732 + NM_000249 MLH1 0 . . . 3.9 83.33 16 4.22 No 74 -4.18 No 0 0 No -20 0.63 No 52 33.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105181687 + NM_021930 RINT1 0 . . . 3.78 69.7 29 5.06 No 12 0.97 Yes 0 0 No -26 0.82 Yes 46 93.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59890172 - NM_032043 BRIP1 0 . . . 2.03 77.17 12 5.29 No 41 0.77 No 0 0 No -27 0.44 No 17 45.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56782217 + NM_058216 RAD51C 0 . . . 2.13 75.08 18 4.69 No 11 1.54 Yes 0 0 No -26 0.61 No 47 87.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41017440 + NM_001164269 RAD51 0 . . . 4 82.27 64 7.64 Yes 58 -1.2 No 0 0 No -26 0.43 No 49 38.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23633543 - NM_024675 PALB2 0 . . . 0.09 69.18 20 3.38 No 29 1.26 Yes 0 0 No -19 0.6 No 55 57.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108147464 + NM_000051 ATM 0 . . . 7.45 78.16 23 4.19 No 43 -1.62 No 0 0 No -56 0.49 No 38 80.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68524021 + NM_133509 RAD51B 0 . . . 7.05 69.28 20 5.1 No 12 0.49 No 0 0 No -44 0.3 No 46 80.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131916621 + NM_005732 RAD50 0 . . . 0.73 69.97 21 5.14 No 23 0.57 No 0 0 No -20 0.52 No 35 53.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59813215 - NM_032043 BRIP1 0 . . . 6.27 81.81 30 5.48 No 70 -2.76 No 0 0 No -29 0.72 Yes 38 69.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68621861 + NM_133509 RAD51B 0 . . . 2.92 70.57 45 7.85 Yes 15 0.47 No 0 0 No -44 0.75 Yes 42 60.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68914475 + NM_133509 RAD51B 0 . . . 1.71 56.61 29 7.68 Yes 17 1.69 Yes 0 0 No -28 0.94 Yes 34 58.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41020102 + NM_001164269 RAD51 0 . . . 3.14 77.23 22 5 No 2 1.35 Yes 0 0 No -22 0.68 Yes 17 58.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47682998 + NM_000251 MSH2 0 . . . 0.25 62.1 38 5.4 No 24 -2.81 No 0 0 No -37 0.63 No 12 34.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68816405 + NM_004360 CDH1 0 . . . 2.92 75.27 38 7.75 Yes 9 0.7 No 0 0 No -37 0.6 No 43 59.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33434100 - NM_002878 RAD51D 0 . . . 3.97 77.31 14 5.65 Yes 51 0.04 No 21 0.58 Yes -24 0.66 Yes 45 64.24 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 68400453 + NM_133509 RAD51B 0 . . . 8.63 83.75 38 5.58 Yes 64 1.03 Yes 0 0 No -37 0.59 No 50 80.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68393540 + NM_133509 RAD51B 0 . . . 7.5 81.31 16 5.28 No 11 0.95 Yes 0 0 No -21 0.5 No 47 69.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40985983 + NM_001164269 RAD51 0 . . . 0.72 81.83 36 6 Yes 38 0.24 No 0 0 No -35 0.48 No 20 93.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68829799 + NM_133509 RAD51B 0 . . . 3.12 80.12 22 4.31 No 46 -3.1 No 0 0 No -21 0.85 Yes 46 64.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75507040 - NM_001040108 MLH3 0 . . . 0.02 0 14 3.6 No 20 0.93 Yes 0 0 No -45 0.88 Yes 38 74.3 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56806623 + NM_058216 RAD51C 0 . . . 4.99 93.95 36 5.81 Yes 45 0.34 No 0 0 No -30 0.44 No 43 61.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215596626 - NM_000465 BARD1 0 . . . 6.28 72.78 19 5.74 Yes 36 0.48 No 0 0 No -18 0.57 No 47 58.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56806761 + NM_058216 RAD51C 0 . . . 6.99 85.02 35 6.11 Yes 5 1.25 Yes 0 0 No -35 0.54 No 53 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190652999 + NM_000534 PMS1 0 . . . 3.11 74.15 24 5.47 No 40 -3.01 No 0 0 No -23 0.38 No 47 92.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108200178 + NM_000051 ATM 0 . . . 3.89 84 28 5.49 No 2 1.5 Yes 0 0 No -31 0.6 No 44 46.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68518840 + NM_133509 RAD51B 0 . . . 0.31 0 12 4.24 No 68 0.69 No 0 0 No -25 0.85 Yes 27 47.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68791820 + NM_004360 CDH1 0 . . . 5.92 80.65 18 5.29 No 39 1.15 Yes 0 0 No -21 0.32 No 44 78.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68347076 + NM_133509 RAD51B 0 . . . 4.17 76.6 32 5.83 Yes 14 1.11 Yes 0 0 No -31 0.86 Yes 48 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68849244 + NM_133509 RAD51B 0 . . . 3.73 70.52 39 5.52 No 74 0.32 No 0 0 No -27 0.8 Yes 45 75.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41023586 + NM_001164269 RAD51 0 . . . 7.03 81.08 22 6.16 Yes 14 0.93 Yes 0 0 No -21 0.95 Yes 44 86.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59905063 - NM_032043 BRIP1 0 . . . 4.45 84 59 7.5 Yes 2 0.83 Yes 0 0 No -26 0.46 No 44 74.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68615968 + NM_133509 RAD51B 0 . . . 3.13 70.4 32 5.74 Yes 22 1.68 Yes 0 0 No -26 0.69 Yes 36 92.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59764684 - NM_032043 BRIP1 0 . . . 1.65 72.33 27 5.74 Yes 6 0.67 No 0 0 No -26 0.52 No 44 33.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59770594 - NM_032043 BRIP1 0 . . . 0.57 64.04 21 5.74 Yes 68 -5.64 No 0 0 No -20 0.86 Yes 39 42.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41268912 - NM_007294 BRCA1 0 . . . 0.76 70.2 18 4.47 No 73 -6.49 No 0 0 No -18 0.75 Yes 42 25.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108137653 + NM_000051 ATM 0 . . . 0.55 0 26 6.4 Yes 45 0.99 Yes 0 0 No -25 0.68 Yes 38 48.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69056637 + NM_133509 RAD51B 0 . . . 0.63 0 24 5 No 46 0.06 No 0 0 No -23 0.89 Yes 36 95.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1212806 + NM_000455 STK11 0 . . . 2.88 68.34 35 7.72 Yes 21 1.71 Yes 0 0 No -30 0.7 Yes 37 81.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89649751 + NM_000314 PTEN 0 . . . 1.94 69.61 14 5.12 No 74 -4.24 No 0 0 No -22 0.65 No 43 72.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59756246 - NM_032043 BRIP1 0 . . . 3.86 79.18 22 5.29 No 3 0.63 No 0 0 No -27 0.59 No 46 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68402320 + NM_133509 RAD51B 0 . . . 2.32 77.79 21 6.03 Yes 61 0.74 No 0 0 No -21 0.62 No 51 48.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47670369 + NM_000251 MSH2 0 . . . 0.79 72.77 13 4.36 No 41 0.73 No 0 0 No -41 0.86 Yes 46 40.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68875683 + NM_133509 RAD51B 0 . . . 1.41 71.75 16 4.69 No 44 1.69 Yes 0 0 No -19 0.17 No 47 40.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68681732 + NM_133509 RAD51B 0 . . . 3.36 0 33 6.19 Yes 14 0.18 No 0 0 No -24 0.44 No 44 85.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68528414 + NM_133509 RAD51B 0 . . . 2.12 0 41 7.1 Yes 23 0.65 No 0 0 No -28 0.94 Yes 34 79.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6045234 - NM_000535 PMS2 0 . . . 3.04 67.1 15 4.58 No 4 0.46 No 0 0 No -32 0.47 No 54 76.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68880205 + NM_133509 RAD51B 0 . . . 2.09 51.55 21 5.2 No 9 0.28 No 0 0 No -20 0.87 Yes 34 70.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41273735 - NM_007294 BRCA1 0 . . . 9.19 80.7 21 5.13 No 55 1.07 Yes 0 0 No -20 0.72 Yes 44 80.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215599450 - NM_000465 BARD1 0 . . . 1.73 72.47 19 4.25 No 33 -3.51 No 0 0 No -18 0.84 Yes 51 20.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68466589 + NM_133509 RAD51B 0 . . . 0.69 0 22 4.05 No 76 -5.82 No 0 0 No -19 0.42 No 47 47.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108218127 + NM_000051 ATM 0 . . . 6.36 82.68 17 5.52 No 63 -3.32 No 0 0 No -17 0.34 No 42 77.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108128590 + NM_000051 ATM 0 . . . 0.08 67.04 13 4.36 No 71 0.76 No 0 0 No -49 0.85 Yes 30 84.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68976140 + NM_133509 RAD51B 0 . . . 2.08 85.76 17 4.24 No 57 0.97 Yes 0 0 No -16 0.65 No 50 88.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108237816 + NM_000051 ATM 0 . . . 2.91 68.95 19 4.69 No 12 1.23 Yes 0 0 No -18 0.82 Yes 42 91.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68659329 + NM_133509 RAD51B 0 . . . 0.58 0 18 3.72 No 16 0.39 No 0 0 No -24 0.39 No 42 54.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37032961 + NM_000249 MLH1 0 . . . 3.49 66.7 35 6.39 Yes 16 -1.6 No 0 0 No -34 0.68 Yes 42 90.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41013352 + NM_001164269 RAD51 0 . . . 0.94 76.63 23 5.38 No 58 -4.69 No 0 0 No -22 0.85 Yes 48 56.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104168103 - NM_001100119 XRCC3 0 . . . 2.26 0 23 5.11 No 15 1.19 Yes 0 0 No -22 0.56 No 43 92.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29121613 - NM_001005735 CHEK2 0 . . . 1.73 74.34 11 4.8 No 76 1.08 Yes 0 0 No -40 0.32 No 50 59.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68743338 + NM_133509 RAD51B 0 . . . 5.12 93.03 20 7.91 Yes 74 0.71 No 0 0 No -19 0.72 Yes 50 90.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23639952 - NM_024675 PALB2 0 . . . 2.61 72.86 33 4.99 No 66 0.29 No 0 0 No -21 0.4 No 43 83.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68669882 + NM_133509 RAD51B 0 . . . 2.47 77.26 19 6.08 Yes 29 0.54 No 0 0 No -27 0.59 No 42 36.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23639352 - NM_024675 PALB2 0 . . . 1.89 75.18 21 5 No 33 1.35 Yes 0 0 No -20 0.87 Yes 25 39.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68762897 + NM_133509 RAD51B 0 . . . 7.65 94.71 30 7.34 Yes -4 0.71 No 0 0 No -29 0.9 Yes 44 54.74 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68684356 + NM_133509 RAD51B 0 . . . 2.72 0 27 5.65 Yes 11 0.25 No 0 0 No -21 0.44 No 47 52.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59907881 - NM_032043 BRIP1 0 . . . 6.43 79.91 50 7.22 Yes 18 0.48 No 0 0 No -22 0.22 No 46 78.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59939202 - NM_032043 BRIP1 0 . . . 0.98 68.29 12 4.24 No 69 0.02 No 0 0 No -24 0.45 No 33 57.32 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68443540 + NM_133509 RAD51B 0 . . . 3.97 81.62 42 6.78 Yes -3 0.17 No 0 0 No -36 0.49 No 39 51.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45793716 - NM_001048171 MUTYH 0 . . . 6.19 83.5 27 4.95 No 62 0.38 No 0 0 No -26 0.73 Yes 50 34.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75501665 - NM_001040108 MLH3 0 . . . 1.22 86.71 9 5 No 33 1.17 Yes 0 0 No -20 0.79 Yes 50 65.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105174064 + NM_021930 RINT1 0 . . . 0.41 61.4 49 8.35 Yes 76 0.25 No 0 0 No -21 0.36 No 44 28.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68707891 + NM_133509 RAD51B 0 . . . 1.84 63.32 36 5.77 Yes 69 -2.98 No 0 0 No -25 0.59 No 20 56.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32918112 + NM_000059 BRCA2 0 . . . 4.75 78.33 15 4.56 No 41 -4.3 No 0 0 No -26 0.33 No 44 82.99 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108126028 + NM_000051 ATM 0 . . . 1.83 74.1 54 7.55 Yes 30 1.68 Yes 0 0 No -25 0.77 Yes 28 63.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108133690 + NM_000051 ATM 0 . . . 5.07 83.31 62 8.19 Yes 57 -4.29 No 0 0 No -30 0.48 No 39 85.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29114979 - NM_001005735 CHEK2 0 . . . 4.76 74.34 45 6.59 Yes 8 1.06 Yes 0 0 No -44 0.68 Yes 50 86.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68877408 + NM_133509 RAD51B 0 . . . 5.78 78.1 16 5.47 No 67 -4.2 No 0 0 No -25 0.69 Yes 43 54.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68775333 + NM_004360 CDH1 0 . . . 0.88 71.65 31 6.93 Yes 42 1.92 Yes 0 0 No -26 0.65 No 57 43.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108118154 + NM_000051 ATM 0 . . . 2.08 71.53 34 4.16 No 34 1.4 Yes 0 0 No -33 0.64 No 36 68.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105191465 + NM_021930 RINT1 0 . . . 3.92 70.85 21 4.69 No 23 1.17 Yes 0 0 No -18 0.89 Yes 40 68.02 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59848608 - NM_032043 BRIP1 0 . . . 6.2 74.43 14 7.94 Yes 31 1.51 Yes 0 0 No -21 0.4 No 41 48.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59818251 - NM_032043 BRIP1 0 . . . 0.57 0 17 6.36 Yes 19 0.08 No 0 0 No -34 0.34 No 39 93.06 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215630384 - NM_000465 BARD1 0 . . . 2.52 64.61 30 5.38 No 19 1.37 Yes 0 0 No -48 0.38 No 39 80.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68811142 + NM_004360 CDH1 0 . . . 2.09 67.74 13 4.9 No 64 0.37 No 0 0 No -22 0.33 No 46 47.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108094561 + NM_000051 ATM 0 . . . 6.24 84.91 27 5.66 Yes 64 1.16 Yes 0 0 No -26 0.69 Yes 47 57.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32973545 + NM_000059 BRCA2 0 . . . 0.74 67.63 18 4.9 No 57 0.41 No 0 0 No -24 0.36 No 26 50.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47715741 + NM_000251 MSH2 0 . . . 1.07 71.02 29 5.73 Yes 1 0.31 No 0 0 No -28 0.79 Yes 50 66.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69079186 + NM_133509 RAD51B 0 . . . 2.99 69.05 28 6.24 Yes 11 -1.67 No 0 0 No -27 0.92 Yes 11 43.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32934772 + NM_000059 BRCA2 0 . . . 0.32 80.38 29 5.88 Yes 35 1.72 Yes 0 0 No -28 0.75 Yes 23 50.8 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75483316 - NM_001040108 MLH3 0 . . . 9.89 90.67 14 4.12 No 66 0.35 No 0 0 No -55 0.62 No 46 96.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104168758 - NM_001100119 XRCC3 0 . . . 4 84.75 48 8 Yes 41 1.03 Yes 0 0 No -47 0.74 Yes 46 76.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108138176 + NM_000051 ATM 0 . . . 6.6 80.57 25 5.27 No 22 0.83 Yes 0 0 No -24 0.89 Yes 41 67.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108123857 + NM_000051 ATM 0 . . . 3.41 70.89 19 5.59 Yes 10 0.48 No 0 0 No -25 0.48 No 48 82.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6012041 - NM_000535 PMS2 0 . . . 9.41 75.05 25 6.32 Yes 71 -3.3 No 0 0 No -24 0.77 Yes 42 71.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59798156 - NM_032043 BRIP1 0 . . . 7.58 88.7 32 6.45 Yes 55 -2.27 No 0 0 No -31 0.68 Yes 40 83.5 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190727689 + NM_000534 PMS1 0 . . . 11.14 87.16 30 5.27 No 52 1.54 Yes 0 0 No -26 0.3 No 34 50.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68859862 + NM_004360 CDH1 0 . . . 0.16 71.51 32 5.74 Yes 32 0.36 No 0 0 No -28 0.32 No 44 39.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68869718 + NM_133509 RAD51B 0 . . . 4.13 77.67 9 3.87 No 69 0.34 No 0 0 No -27 0.55 No 53 65.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215651531 - NM_000465 BARD1 0 . . . 4.53 79.39 13 3.27 No 30 0.69 No 0 0 No -37 0.54 No 50 52.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68409963 + NM_133509 RAD51B 0 . . . 3.88 73.11 36 5.8 Yes 34 -2.91 No 0 0 No -28 0.79 Yes 51 71.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94152995 - NM_005591 MRE11 0 . . . 2.75 67.07 29 5.82 Yes 57 0.37 No 0 0 No -20 0.65 No 45 59.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68709500 + NM_133509 RAD51B 0 . . . 0.36 79.81 38 5.44 No 61 0.6 No 0 0 No -26 0.89 Yes 48 46.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69102389 + NM_133509 RAD51B 0 . . . 6.36 79.67 21 5.19 No 10 0.98 Yes 0 0 No -20 0.72 Yes 48 87.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69078197 + NM_133509 RAD51B 0 . . . 6.06 84.41 23 5 No 14 0.58 No 0 0 No -22 0.86 Yes 44 84.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59913287 - NM_032043 BRIP1 0 . . . 0.79 72.12 32 6.17 Yes 50 0.38 No 0 0 No -31 0.78 Yes 51 78.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68923387 + NM_133509 RAD51B 0 . . . 3.6 63.94 21 4.61 No -4 0.32 No 0 0 No -25 0.86 Yes 44 63.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68576163 + NM_133509 RAD51B 0 . . . 3.53 71.9 55 8.7 Yes 16 0.66 No 0 0 No -31 0.67 Yes 42 92.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69047012 + NM_133509 RAD51B 0 . . . 5.79 71.93 21 5.19 No 52 0.23 No 0 0 No -52 0.31 No 38 60.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40989565 + NM_001164269 RAD51 0 . . . 3.42 70.85 27 5.74 Yes 13 0.81 Yes 0 0 No -26 0.85 Yes 40 91.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68969393 + NM_133509 RAD51B 0 . . . 0.73 65.52 28 5.19 No 47 1.17 Yes 0 0 No -21 0.31 No 56 35.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32912546 + NM_000059 BRCA2 0 . . . 2.44 76.72 17 6.86 Yes 9 0.51 No 0 0 No -26 0.54 No 38 59.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68864251 + NM_004360 CDH1 0 . . . 2.31 71.58 30 6 Yes 70 0.68 No 0 0 No -26 0.77 Yes 17 33.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68777381 + NM_004360 CDH1 0 . . . 0.1 0 30 5.15 No 27 0.92 Yes 0 0 No -27 0.58 No 31 86.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131936426 + NM_005732 RAD50 0 . . . 6.07 69.18 25 5 No 14 0.58 No 0 0 No -28 0.5 No 44 62.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131893479 + NM_005732 RAD50 0 . . . 7.98 74.65 15 5.57 Yes 63 1.43 Yes 0 0 No -46 0.3 No 47 72.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68379976 + NM_133509 RAD51B 0 . . . 1.23 63.5 29 6.24 Yes 52 1.06 Yes 0 0 No -28 0.61 No 45 54.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108114900 + NM_000051 ATM 0 . . . 2.01 75.44 23 6.08 Yes 35 1.59 Yes 0 0 No -22 0.65 No 23 91.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68949875 + NM_133509 RAD51B 0 . . . 6.54 89.78 13 4.9 No -4 0.92 Yes 0 0 No -55 0.69 Yes 51 43.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47670984 + NM_000251 MSH2 0 . . . 1.76 82.25 35 5.55 No 23 -1.12 No 0 0 No -24 0.33 No 50 84.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131935290 + NM_005732 RAD50 0 . . . 6.04 86.54 29 5.83 Yes 17 0.26 No 0 0 No -28 0.76 Yes 41 80.85 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59938095 - NM_032043 BRIP1 0 . . . 4.67 83.4 26 5.1 No 69 0.98 Yes 0 0 No -25 0.97 Yes 46 91.16 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108167982 + NM_000051 ATM 0 . . . 4.65 74.44 13 4 No 31 -2.79 No 22 0.84 Yes -12 0.63 No 45 46.84 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 190668034 + NM_000534 PMS1 0 . . . 2.86 74.88 24 5.48 No 43 1.12 Yes 0 0 No -23 0.75 Yes 46 47.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68617929 + NM_133509 RAD51B 0 . . . 6.59 86.44 41 5.28 No 7 0.74 No 0 0 No -26 0.84 Yes 51 81.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190662022 + NM_000534 PMS1 0 . . . 2.27 0 31 5.57 Yes 0 0.89 Yes 0 0 No -24 0.62 No 40 59.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41025910 + NM_001164269 RAD51 0 . . . 5.1 72.43 17 5.59 Yes 23 1.17 Yes 0 0 No -19 0.5 No 39 76.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89730269 + NM_000314 PTEN 0 . . . 3.12 80.44 18 5.29 No 50 0.63 No 0 0 No -24 0.64 No 40 53.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68782425 + NM_133509 RAD51B 0 . . . 4.02 80.12 28 4.67 No 9 1.23 Yes 0 0 No -27 0.56 No 49 90.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131911567 + NM_005732 RAD50 0 . . . 5.32 75.37 24 5.42 No 33 -2.39 No 0 0 No -23 0.75 Yes 47 33.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68476807 + NM_133509 RAD51B 0 . . . 0.02 55.34 24 5.17 No 74 1.21 Yes 0 0 No -23 0.42 No 21 83.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59754832 - NM_032043 BRIP1 0 . . . 9.01 83.91 15 5.39 No -3 0.58 No 0 0 No -52 0.72 Yes 48 57.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59847409 - NM_032043 BRIP1 0 . . . 4.35 70.18 20 4.74 No 57 0.73 No 0 0 No -19 0.49 No 45 79.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108229790 + NM_000051 ATM 0 . . . 4.46 80.67 30 5.55 No -4 0.55 No 0 0 No -29 0.79 Yes 48 72.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89710744 + NM_000314 PTEN 0 . . . 4.79 81.31 21 5.01 No 21 1.25 Yes 0 0 No -20 0.64 No 47 86.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68706959 + NM_133509 RAD51B 0 . . . 4.01 58.96 16 6.48 Yes 37 0.65 No 0 0 No -30 0.9 Yes 47 78.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47780768 + NM_000251 MSH2 0 . . . 0.45 63.32 47 9.08 Yes 10 0.05 No 0 0 No -28 0.54 No 53 37.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59779120 - NM_032043 BRIP1 0 . . . 5.97 82.87 16 4.96 No 49 0.92 Yes 0 0 No -24 0.78 Yes 44 93.33 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47804007 + NM_000251 MSH2 0 . . . 2.48 0 25 5.39 No 33 0.75 No 0 0 No -24 0.85 Yes 45 90.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68596923 + NM_133509 RAD51B 0 . . . 6.19 77.8 17 4.8 No 56 0.76 No 0 0 No -21 0.63 No 40 69.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59881761 - NM_032043 BRIP1 0 . . . 2.62 65.67 18 5.39 No 75 -5.17 No 0 0 No -22 0.55 No 46 32.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68737090 + NM_133509 RAD51B 0 . . . 0.73 80.26 30 3.73 No 33 0.62 No 0 0 No -25 0.79 Yes 19 39.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190649026 + NM_000534 PMS1 0 . . . 4.03 73.01 49 7.07 Yes 22 1.38 Yes 0 0 No -43 0.47 No 36 65.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68725244 + NM_133509 RAD51B 0 . . . 3.42 72.9 14 4.47 No 24 0.61 No 0 0 No -46 0.76 Yes 43 90.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84383870 - NM_139076 FAM175A 0 . . . 3.66 64.26 16 4.3 No 1 0.85 Yes 0 0 No -22 0.41 No 63 22.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84395563 - NM_139076 FAM175A 0 . . . 5.52 81.51 45 5.01 No 71 0.77 Yes 0 0 No -23 0.34 No 39 55.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68335761 + NM_133509 RAD51B 0 . . . 7.57 79.82 15 4.46 No 17 0.1 No 0 0 No -18 0.87 Yes 47 50.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68895916 + NM_133509 RAD51B 0 . . . 4.85 71.48 34 5.31 No 47 0.35 No 0 0 No -33 0.58 No 48 77.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68666085 + NM_133509 RAD51B 0 . . . 3.18 62.73 25 5.57 Yes 15 0.95 Yes 0 0 No -24 0.82 Yes 38 81.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131969654 + NM_005732 RAD50 0 . . . 3.46 77.43 21 4.97 No 49 0.79 Yes 0 0 No -25 0.37 No 49 21.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215669309 - NM_000465 BARD1 0 . . . 1.23 0 28 5.29 No 8 0.42 No 0 0 No -56 0.42 No 49 69.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190692007 + NM_000534 PMS1 0 . . . 6.55 72.8 25 4.95 No 52 1.57 Yes 0 0 No -20 0.67 Yes 35 86.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41220262 - NM_007294 BRCA1 0 . . . 0.89 0 35 6.26 Yes 61 0.67 No 0 0 No -23 0.9 Yes 17 89.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68957377 + NM_133509 RAD51B 0 . . . 1.82 65.57 14 4.47 No 34 1.06 Yes 0 0 No -21 0.59 No 50 60.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68859757 + NM_133509 RAD51B 0 . . . 0.7 70.27 21 4.47 No 71 1.09 Yes 0 0 No -20 0.73 Yes 33 90.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75514176 - NM_001040108 MLH3 0 . . . 1.75 68.13 37 6.24 Yes 37 1.32 Yes 0 0 No -36 0.91 Yes 21 66.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21979196 - NM_000077 CDKN2A 0 . . . 5.5 77.29 14 5.74 Yes 4 0.83 Yes 0 0 No -30 0.5 No 48 45.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131968813 + NM_005732 RAD50 0 . . . 2.3 84.41 18 5.67 Yes 74 0.84 Yes 0 0 No -22 0.65 No 25 71.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89636345 + NM_000314 PTEN 0 . . . 4.58 69.17 27 5.39 No 32 0.2 No 0 0 No -24 0.78 Yes 44 77.41 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215635971 - NM_000465 BARD1 0 . . . 7.41 79.85 21 5.13 No 2 1.13 Yes 0 0 No -23 0.58 No 47 59.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68788395 + NM_133509 RAD51B 0 . . . 2.65 68.52 21 5.02 No 17 1.35 Yes 0 0 No -20 0.67 Yes 33 78.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131970329 + NM_005732 RAD50 0 . . . 6.99 80.75 31 4.62 No 13 0.46 No 0 0 No -33 0.92 Yes 47 67.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68958654 + NM_133509 RAD51B 0 . . . 1.87 0 31 4.03 No 28 1.55 Yes 0 0 No -27 0.47 No 50 52.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94168139 - NM_005591 MRE11 0 . . . 1.78 70.07 15 5.29 No 54 0.87 Yes 0 0 No -21 0.21 No 13 30.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7568207 - NM_000546 TP53 0 . . . 2.62 75.65 29 5.43 No 40 0.4 No 0 0 No -21 0.53 No 46 34.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131921910 + NM_005732 RAD50 0 . . . 5.52 78.06 31 9.7 Yes 13 0.29 No 0 0 No -30 0.93 Yes 45 95.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90948352 - NM_002485 NBN 0 . . . 2.13 78.46 23 5.07 No 66 -4.91 No 0 0 No -22 0.72 Yes 50 27.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68815426 + NM_004360 CDH1 0 . . . 9.12 87.44 21 5.1 No 5 1.33 Yes 0 0 No -20 0.62 No 44 85.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131891113 + NM_005732 RAD50 0 . . . 1.4 67.66 10 5 No -4 0.01 No 0 0 No -19 0.59 No 62 35.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108132160 + NM_000051 ATM 0 . . . 3.06 80.43 16 5.28 No 5 0.33 No 0 0 No -26 0.54 No 48 81.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29091452 - NM_001005735 CHEK2 0 . . . 2.68 79.24 32 6.08 Yes 33 1.12 Yes 0 0 No -31 0.31 No 46 72.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69119431 + NM_133509 RAD51B 0 . . . 1.63 79.24 24 5 No 71 1.18 Yes 0 0 No -23 0.74 Yes 50 51.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32925624 + NM_000059 BRCA2 0 . . . 0.29 77.27 29 7 Yes 21 0.36 No 0 0 No -29 0.6 No 49 49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68865170 + NM_133509 RAD51B 0 . . . 6.12 74.4 25 6.03 Yes 10 1.99 Yes 0 0 No -24 0.89 Yes 48 84.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108111666 + NM_000051 ATM 0 . . . 3.47 58.39 41 5.28 No 10 1.22 Yes 0 0 No -40 0.34 No 39 47.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37056891 + NM_000249 MLH1 0 . . . 8.03 79.17 21 5.2 No 55 0.49 No 0 0 No -20 0.44 No 42 33.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89626557 + NM_000314 PTEN 0 . . . 0.53 66.96 48 6.93 Yes 18 0.82 Yes 0 0 No -26 0.45 No 23 58.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32951775 + NM_000059 BRCA2 0 . . . 7.22 74.23 26 5.46 No 2 0.13 No 0 0 No -25 0.62 No 46 48.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69061548 + NM_133509 RAD51B 0 . . . 1.85 75.87 27 5.03 No -2 0.53 No 0 0 No -26 0.57 No 53 69.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7568537 - NM_000546 TP53 0 . . . 2.24 80.12 30 5.56 Yes 7 0.57 No 0 0 No -25 0.56 No 40 45.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47788816 + NM_000251 MSH2 0 . . . 0.72 58.1 15 4.57 No 59 -3.28 No 0 0 No -32 0.67 Yes 45 59.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47739364 + NM_000251 MSH2 0 . . . 1.98 0 29 8.29 Yes 23 -2.04 No 0 0 No -23 0.43 No 48 84.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89658555 + NM_000314 PTEN 0 . . . 4.96 91.21 21 5.09 No 12 1.32 Yes 0 0 No -54 0.66 No 46 95.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68628906 + NM_133509 RAD51B 0 . . . 6.46 88.76 22 3.52 No 6 0.15 No 0 0 No -21 0.6 No 48 70.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190709530 + NM_000534 PMS1 0 . . . 10.86 86.71 15 5.5 No 23 1.29 Yes 0 0 No -28 0.31 No 34 58.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94213737 - NM_005591 MRE11 0 . . . 2.03 75.96 32 4.93 No 30 1.04 Yes 0 0 No -31 0.59 No 53 43.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215594469 - NM_000465 BARD1 0 . . . 2.81 67 26 7.58 Yes -4 0.34 No 0 0 No -25 0.86 Yes 45 82.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68584124 + NM_133509 RAD51B 0 . . . 0 0 55 5.89 Yes 55 -4.85 No 0 0 No -37 0.4 No 37 35.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190704469 + NM_000534 PMS1 0 . . . 9.61 85.61 18 5.66 Yes 71 0.91 Yes 0 0 No -17 0.84 Yes 42 61.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59760300 - NM_032043 BRIP1 0 . . . 0.42 74.73 16 5.37 No 19 -3.36 No 0 0 No -25 0.89 Yes 20 53.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59781155 - NM_032043 BRIP1 0 . . . 2.11 71.09 30 5.74 Yes 32 0.26 No 0 0 No -23 0.6 No 45 95.92 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68500601 + NM_133509 RAD51B 0 . . . 2.95 77.68 16 5.83 Yes 62 -3.61 No 0 0 No -27 0.31 No 47 68.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89646807 + NM_000314 PTEN 0 . . . 2.39 67.47 22 5.2 No 75 -5.96 No 0 0 No -20 0.73 Yes 39 67.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190672036 + NM_000534 PMS1 0 . . . 4.84 81.06 16 5.07 No 10 1.52 Yes 0 0 No -21 0.66 No 48 94.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41004241 + NM_001164269 RAD51 0 . . . 2.73 81.5 29 5.36 No 40 -1.81 No 0 0 No -28 0.61 No 47 42.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69002385 + NM_133509 RAD51B 0 . . . 6.35 81.51 45 6.47 Yes 75 1.84 Yes 0 0 No -34 0.65 No 42 49.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89651564 + NM_000314 PTEN 0 . . . 1.45 0 20 5.06 No 10 0.2 No 0 0 No -26 0.46 No 48 65.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108208827 + NM_000051 ATM 0 . . . 0.62 74.09 18 4.69 No 66 0.23 No 0 0 No -60 0.63 No 37 52.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68320945 + NM_133509 RAD51B 0 . . . 1.25 70.15 35 5.54 No 61 0.38 No 0 0 No -34 0.72 Yes 42 62.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68891610 + NM_133509 RAD51B 0 . . . 2.16 78.27 28 5.38 No 13 0.64 No 0 0 No -27 0.79 Yes 50 82.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68529690 + NM_133509 RAD51B 0 . . . 5.76 75.14 10 4.59 No 55 1.27 Yes 0 0 No -49 0.77 Yes 35 91.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90956655 - NM_002485 NBN 0 . . . 1.83 75.16 28 6.12 Yes 34 0.07 No 0 0 No -27 0.7 Yes 48 36.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33439234 - NM_002878 RAD51D 0 . . . 2.37 71.99 22 3.88 No 55 1.21 Yes 0 0 No -27 0.61 No 48 40.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68693579 + NM_133509 RAD51B 0 . . . 3.08 0 31 4.96 No 25 1.12 Yes 0 0 No -30 0.65 No 51 44.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68895013 + NM_133509 RAD51B 0 . . . 7.78 77.08 35 5.89 Yes 8 1.05 Yes 0 0 No -20 0.7 Yes 43 65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69056023 + NM_133509 RAD51B 0 . . . 3.25 71.24 25 4.72 No 62 -4.53 No 0 0 No -24 0.65 No 40 39.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47780801 + NM_000251 MSH2 0 . . . 3.19 73.72 35 6.33 Yes 15 0.35 No 0 0 No -34 0.61 No 43 62.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68828386 + NM_133509 RAD51B 0 . . . 5.56 79.03 43 6.53 Yes 11 1.77 Yes 0 0 No -38 0.65 No 38 68.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89681369 + NM_000314 PTEN 0 . . . 5.14 77.22 25 5.48 No 58 -1.34 No 0 0 No -24 0.56 No 30 74.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59769186 - NM_032043 BRIP1 0 . . . 0.57 79.24 29 5.91 Yes 23 0.96 Yes 0 0 No -28 0.66 Yes 47 65.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33438578 - NM_002878 RAD51D 0 . . . 3.01 0 24 4.41 No 9 1.16 Yes 0 0 No -24 0.88 Yes 42 56.11 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190664489 + NM_000534 PMS1 0 . . . 4.05 80.17 9 5.66 Yes 30 1.56 Yes 0 0 No -27 0.59 No 52 37.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68820095 + NM_004360 CDH1 0 . . . 1.69 76.23 44 8.05 Yes 59 1.41 Yes 0 0 No -43 0.89 Yes 40 60.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84389959 - NM_139076 FAM175A 0 . . . 1.65 71.84 22 4.34 No 75 1.17 Yes 0 0 No -21 0.52 No 53 94.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37054987 + NM_000249 MLH1 0 . . . 1.77 72.23 15 5.2 No 62 -3.7 No 0 0 No -22 0.81 Yes 50 41.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190707788 + NM_000534 PMS1 0 . . . 3.54 84.17 13 4.6 No 4 0.89 Yes 0 0 No -20 0.6 No 17 43.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21977720 - NM_000077 CDKN2A 0 . . . 4.28 86.71 20 5.45 No 29 0.77 Yes 0 0 No -22 0.56 No 46 49.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68520876 + NM_133509 RAD51B 0 . . . 0.58 0 32 5.94 Yes 14 0.6 No 0 0 No -27 0.29 No 38 87.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68832313 + NM_133509 RAD51B 0 . . . 2.36 0 16 3.66 No 11 0.46 No 0 0 No -27 0.63 No 47 56.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215649642 - NM_000465 BARD1 0 . . . 6.11 69.94 10 4.9 No 48 -3.98 No 0 0 No -19 0.44 No 44 74.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47770188 + NM_000251 MSH2 0 . . . 0.15 80.65 14 3.78 No 13 0.69 No 0 0 No -24 0.81 Yes 50 75.35 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37076339 + NM_000249 MLH1 0 . . . 7.08 74.91 21 5.19 No 19 0.71 No 0 0 No -20 0.82 Yes 43 65.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37082782 + NM_000249 MLH1 0 . . . 5.44 84.54 27 4.64 No 12 0.67 No 0 0 No -26 0.93 Yes 46 91.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68528120 + NM_133509 RAD51B 0 . . . 1.71 68.18 18 7.55 Yes 49 -1.24 No 0 0 No -26 0.58 No 35 70.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131895247 + NM_005732 RAD50 0 . . . 5.72 76.56 33 5.72 Yes 34 1.62 Yes 0 0 No -29 0.42 No 32 77.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21966455 - NM_000077 CDKN2A 0 . . . 0.81 0 38 6.26 Yes 1 0.24 No 0 0 No -25 0.49 No 20 44.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41269916 - NM_007294 BRCA1 0 . . . 0.58 0 18 4.92 No 17 0.43 No 0 0 No -26 0.91 Yes 41 57.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32962280 + NM_000059 BRCA2 0 . . . 4.74 0 50 7.98 Yes 18 1.46 Yes 0 0 No -49 0.58 No 45 74.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32966774 + NM_000059 BRCA2 0 . . . 5.97 74.92 29 5.48 No 13 1.18 Yes 0 0 No -23 0.77 Yes 44 73.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68465263 + NM_133509 RAD51B 0 . . . 5.41 79.3 37 7.43 Yes 7 0.92 Yes 0 0 No -36 0.74 Yes 41 57.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69069669 + NM_133509 RAD51B 0 . . . 2.24 66.69 26 4.81 No 44 1.26 Yes 0 0 No -23 0.63 No 14 46.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68828557 + NM_004360 CDH1 0 . . . 7.23 80.34 24 4.94 No 24 0.61 No 0 0 No -21 0.4 No 52 61.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68849845 + NM_004360 CDH1 0 . . . 2.76 0 16 5.29 No 14 1.22 Yes 0 0 No -21 0.75 Yes 13 61.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21981817 - NM_000077 CDKN2A 0 . . . 0.65 74.14 24 4.61 No 49 1.27 Yes 0 0 No -23 0.81 Yes 41 82.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21972490 - NM_000077 CDKN2A 0 . . . 1.51 0 23 4.68 No 25 0.66 No 0 0 No -45 0.51 No 33 84.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40986274 + NM_001164269 RAD51 0 . . . 5.47 83.84 27 6.4 Yes 49 0.88 Yes 0 0 No -26 0.91 Yes 41 95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131981220 + NM_005732 RAD50 0 . . . 2.89 77.09 17 5.07 No 11 1.41 Yes 0 0 No -21 0.78 Yes 47 89.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215588556 - NM_000465 BARD1 0 . . . 8.14 79.29 26 5.1 No 8 1.21 Yes 0 0 No -23 0.83 Yes 50 51.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131979924 + NM_005732 RAD50 0 . . . 4.45 74.32 43 6.38 Yes 26 0.35 No 0 0 No -30 0.67 Yes 32 44.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89649324 + NM_000314 PTEN 0 . . . 0.31 58.03 18 4.9 No 75 0.19 No 0 0 No -17 0.62 No 46 48.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89639965 + NM_000314 PTEN 0 . . . 3.66 72.79 20 4.8 No 19 -2.28 No 0 0 No -19 0.86 Yes 48 49.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47795913 + NM_000251 MSH2 0 . . . 4.68 70.85 22 5 No 35 0.39 No 0 0 No -20 0.86 Yes 45 60.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105176928 + NM_021930 RINT1 0 . . . 0.84 0 32 9.11 Yes 72 0.91 Yes 0 0 No -31 0.49 No 46 67.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23629159 - NM_024675 PALB2 0 . . . 6.49 83.17 13 4.36 No -2 0.13 No 0 0 No -25 0.9 Yes 47 82.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190669600 + NM_000534 PMS1 0 . . . 5.92 86.35 25 5.91 Yes 36 0.5 No 0 0 No -25 0.46 No 42 45.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68805705 + NM_004360 CDH1 0 . . . 1.77 81.83 22 3.52 No 12 -1.53 No 0 0 No -42 0.47 No 45 65.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68799275 + NM_004360 CDH1 0 . . . 3.66 80.12 46 6.96 Yes 7 1.16 Yes 0 0 No -52 0.44 No 51 86.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68503552 + NM_133509 RAD51B 0 . . . 1.41 68.86 48 7.35 Yes 62 -5.75 No 0 0 No -23 0.43 No 43 48.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68286885 + NM_133509 RAD51B 0 . . . 6.64 74.56 11 4.12 No 44 1.64 Yes 0 0 No -30 0.88 Yes 14 52.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108160104 + NM_000051 ATM 0 . . . 4.73 77.33 17 6.86 Yes 73 -3.37 No 0 0 No -24 0.48 No 45 85.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29106964 - NM_001005735 CHEK2 0 . . . 8.83 80.97 24 4.05 No 0 0.87 Yes 0 0 No -20 0.51 No 34 54.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68884040 + NM_133509 RAD51B 0 . . . 3.54 80.98 18 5.32 No 75 1.48 Yes 0 0 No -28 0.95 Yes 15 32.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68582389 + NM_133509 RAD51B 0 . . . 0.9 75.28 38 7.48 Yes 25 0.25 No 0 0 No -27 0.78 Yes 32 57.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68977648 + NM_133509 RAD51B 0 . . . 2.99 68.31 21 4.47 No 20 -0.81 No 0 0 No -21 0.4 No 52 28.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68650416 + NM_133509 RAD51B 0 . . . 0.13 74.23 40 8.09 Yes 29 -1.55 No 0 0 No -39 0.79 Yes 54 76.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75495769 - NM_001040108 MLH3 0 . . . 1.44 66.46 19 5.39 No 16 0.94 Yes 0 0 No -23 0.52 No 42 86.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68885471 + NM_133509 RAD51B 0 . . . 3.17 73.3 13 5.48 No 10 0.24 No 0 0 No -20 0.38 No 38 55.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68511209 + NM_133509 RAD51B 0 . . . 3.66 62.9 40 4.92 No 11 1.47 Yes 0 0 No -23 0.55 No 47 52.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56801224 + NM_058216 RAD51C 0 . . . 2.04 0 29 5.29 No 37 0.32 No 0 0 No -21 0.68 Yes 48 68.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37059240 + NM_000249 MLH1 0 . . . 13.81 91.76 22 4.8 No 69 -3.44 No 0 0 No -21 0.96 Yes 43 87.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68314357 + NM_133509 RAD51B 0 . . . 4.29 69.15 23 4.95 No 26 0.66 No 0 0 No -22 0.87 Yes 38 92.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90951984 - NM_002485 NBN 0 . . . 4.61 71.56 18 7.25 Yes 61 0.79 Yes 0 0 No -32 0.65 No 39 86.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59814794 - NM_032043 BRIP1 0 . . . 6.26 83.63 17 5.19 No 3 1.87 Yes 0 0 No -46 0.29 No 38 58.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90958228 - NM_002485 NBN 0 . . . 6.96 70.45 47 6.46 Yes 28 1.36 Yes 0 0 No -28 0.59 No 45 78.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41209140 - NM_007294 BRCA1 0 . . . 0.96 67.44 29 5.65 Yes 26 1.42 Yes 0 0 No -28 0.87 Yes 32 87.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69129407 + NM_133509 RAD51B 0 . . . 2.44 63.33 17 5.19 No 63 0.6 No 0 0 No -22 0.59 No 41 80.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68417034 + NM_133509 RAD51B 0 . . . 2 76.73 23 6 Yes 26 -2.86 No 0 0 No -22 0.63 No 41 93.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68769414 + NM_133509 RAD51B 0 . . . 4.87 83.33 9 3.27 No 25 -2.4 No 0 0 No -29 0.38 No 51 75.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68569009 + NM_133509 RAD51B 0 . . . 2.33 74.31 36 6.75 Yes 12 1.14 Yes 0 0 No -31 0.6 No 46 84.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23624665 - NM_024675 PALB2 0 . . . 7.35 85.51 27 5.97 Yes 5 1.44 Yes 0 0 No -26 0.75 Yes 53 81.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94182009 - NM_005591 MRE11 0 . . . 5.76 77.01 35 6.78 Yes 10 0.71 No 0 0 No -35 0.33 No 18 38.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344016 + NM_133509 RAD51B 0 . . . 8.38 77.75 31 4.4 No 59 0.93 Yes 0 0 No -24 0.52 No 43 59.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68411237 + NM_133509 RAD51B 0 . . . 5.37 76.86 14 5.09 No 9 0.47 No 0 0 No -20 0.45 No 48 49.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45800674 - NM_001048171 MUTYH 0 . . . 4.96 0 32 5.74 Yes 29 1.41 Yes 0 0 No -26 0.44 No 29 67.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68828803 + NM_004360 CDH1 0 . . . 2.2 72.26 33 4.42 No -2 0.17 No 0 0 No -23 0.68 Yes 17 74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108127564 + NM_000051 ATM 0 . . . 5.32 73.92 16 3.94 No 21 0.91 Yes 0 0 No -26 0.67 Yes 46 78.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131962931 + NM_005732 RAD50 0 . . . 7.79 75.03 16 4.69 No 64 1.36 Yes 0 0 No -26 0.4 No 44 80.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69063532 + NM_133509 RAD51B 0 . . . 2.7 72.32 37 6.56 Yes 65 0.87 Yes 0 0 No -34 0.41 No 54 37.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59900613 - NM_032043 BRIP1 0 . . . 7.01 78.73 31 5.46 No -1 0.08 No 0 0 No -30 0.41 No 53 51.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68830201 + NM_004360 CDH1 0 . . . 3.6 70.17 10 4.69 No 35 0.89 Yes 0 0 No -23 0.84 Yes 23 15.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21991552 - NM_000077 CDKN2A 0 . . . 4.67 81.19 21 5 No 62 1.04 Yes 0 0 No -20 0.89 Yes 42 34.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104166511 - NM_001100119 XRCC3 0 . . . 5.65 80.67 26 4.06 No -3 0.2 No 0 0 No -26 0.56 No 51 72.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215653762 - NM_000465 BARD1 0 . . . 3.16 70.23 15 5.11 No 23 1.28 Yes 0 0 No -28 0.49 No 28 27.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68633462 + NM_133509 RAD51B 0 . . . 3.05 85.32 31 6.08 Yes 24 0.51 No 0 0 No -30 0.53 No 48 74.44 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69125092 + NM_133509 RAD51B 0 . . . 1.94 71.77 23 5.2 No 19 1.56 Yes 0 0 No -43 0.91 Yes 39 91.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75499840 - NM_001040108 MLH3 0 . . . 3.49 75.43 34 6.99 Yes -4 1 Yes 0 0 No -29 0.56 No 56 57.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94222757 - NM_005591 MRE11 0 . . . 0.92 56.59 21 5.83 Yes -2 0.35 No 0 0 No -23 0.76 Yes 29 73.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69044152 + NM_133509 RAD51B 0 . . . 10.77 77.24 22 4.8 No 18 1.06 Yes 0 0 No -21 0.94 Yes 40 82.65 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33425211 - NM_002878 RAD51D 0 . . . 5.96 85.52 23 5.56 Yes 20 0.14 No 0 0 No -22 0.92 Yes 51 54.45 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47695913 + NM_000251 MSH2 0 . . . 0.67 74.28 29 5.83 Yes 35 -2.77 No 0 0 No -25 0.52 No 29 69.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68996075 + NM_133509 RAD51B 0 . . . 2.46 76.32 27 5.29 No 76 1.16 Yes 0 0 No -26 0.73 Yes 49 70.11 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59783031 - NM_032043 BRIP1 0 . . . 7.48 77.47 20 7.14 Yes 2 0.65 No 0 0 No -19 0.54 No 47 89.17 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68469761 + NM_133509 RAD51B 0 . . . 4.32 66.53 16 4.69 No 70 1.3 Yes 0 0 No -22 0.43 No 34 95.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29118125 - NM_001005735 CHEK2 0 . . . 5.48 71.51 34 5.46 No 16 0.77 Yes 0 0 No -33 0.74 Yes 42 80.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41205741 - NM_007294 BRCA1 0 . . . 2.41 68.34 46 6.71 Yes 13 0.8 Yes 0 0 No -34 0.7 Yes 45 72.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23642063 - NM_024675 PALB2 0 . . . 0.28 68.08 22 4.79 No 14 1.39 Yes 0 0 No -24 0.56 No 37 68.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68958569 + NM_133509 RAD51B 0 . . . 0.21 0 21 5.18 No 8 1.44 Yes 0 0 No -27 0.51 No 42 70.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89650856 + NM_000314 PTEN 0 . . . 5.88 84.57 73 8.83 Yes 47 0.38 No 0 0 No -27 0.67 Yes 44 81.26 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68853091 + NM_133509 RAD51B 0 . . . 4.24 75.41 20 4.57 No 73 1.31 Yes 0 0 No -19 0.73 Yes 48 53.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59889574 - NM_032043 BRIP1 0 . . . 3.89 75.43 13 5 No -1 1.13 Yes 0 0 No -19 0.53 No 44 60.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108155400 + NM_000051 ATM 0 . . . 1.76 73.2 16 5.74 Yes 69 0.99 Yes 0 0 No -26 0.55 No 61 38.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131935508 + NM_005732 RAD50 0 . . . 5.63 68.47 26 4.57 No 21 0.66 No 0 0 No -25 0.57 No 37 88.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89683428 + NM_000314 PTEN 0 . . . 3.15 76.84 44 6.63 Yes 53 0.89 Yes 0 0 No -28 0.52 No 29 55.72 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47669996 + NM_000251 MSH2 0 . . . 2.79 68.88 28 5.48 No -4 0.69 No 0 0 No -27 0.91 Yes 51 55.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69142361 + NM_133509 RAD51B 0 . . . 1.76 70.82 19 5.74 Yes 66 1.18 Yes 0 0 No -18 0.91 Yes 49 76.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68825951 + NM_004360 CDH1 0 . . . 4.65 73.33 22 4.69 No 42 0.97 Yes 0 0 No -21 0.83 Yes 45 49.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45800735 - NM_001048171 MUTYH 0 . . . 4.06 72.35 22 5.66 Yes 65 -2.48 No 0 0 No -25 0.22 No 44 86.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23622826 - NM_024675 PALB2 0 . . . 1.76 76.63 21 4.58 No 58 -4.04 No 0 0 No -20 0.91 Yes 43 72.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68778443 + NM_004360 CDH1 0 . . . 1.33 61.37 21 4.58 No 33 0.33 No 0 0 No -20 0.76 Yes 33 86.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68825721 + NM_004360 CDH1 0 . . . 1.99 0 13 3.81 No 69 0.58 No 0 0 No -25 0.35 No 46 60.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69106531 + NM_133509 RAD51B 0 . . . 2.1 0 26 5.65 Yes 74 -0.8 No 0 0 No -25 0.86 Yes 11 42.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23648485 - NM_024675 PALB2 0 . . . 1.3 68.95 18 4.92 No 59 1.44 Yes 0 0 No -26 0.45 No 42 92.43 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68704633 + NM_133509 RAD51B 0 . . . 5.62 82.97 23 7.07 Yes 4 1.34 Yes 0 0 No -22 0.96 Yes 54 62.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190725427 + NM_000534 PMS1 0 . . . 2.71 66.09 15 5.38 No 76 0.68 No 0 0 No -14 0.27 No 43 86.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94192960 - NM_005591 MRE11 0 . . . 3.37 68.95 22 4.67 No 37 0.57 No 0 0 No -21 0.92 Yes 36 84.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69106229 + NM_133509 RAD51B 0 . . . 5.99 84.5 18 4.18 No 70 0.69 No 0 0 No -42 0.35 No 42 84.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29134094 - NM_001005735 CHEK2 0 . . . 2.2 80.65 52 7.94 Yes 33 1.08 Yes 0 0 No -23 0.67 Yes 50 82.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47738595 + NM_000251 MSH2 0 . . . 0.89 74.03 15 4.58 No 69 0.08 No 0 0 No -57 0.43 No 43 94.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59770032 - NM_032043 BRIP1 0 . . . 6.46 85.5 12 5.48 No 48 2.58 Yes 0 0 No -24 0.42 No 16 92.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41272718 - NM_007294 BRCA1 0 . . . 0.18 61.67 21 6.08 Yes 73 0.82 Yes 0 0 No -30 0.6 No 43 42.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69027851 + NM_133509 RAD51B 0 . . . 6.98 85.23 22 4.69 No 5 1.87 Yes 0 0 No -22 0.67 Yes 46 59.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104163660 - NM_001100119 XRCC3 0 . . . 2.96 76.03 21 4.24 No 11 -1.67 No 0 0 No -19 0.92 Yes 47 52.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152358165 - NM_005431 XRCC2 0 . . . 2.88 76.2 18 5.27 No 30 1.5 Yes 0 0 No -17 0.53 No 47 82.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69079119 + NM_133509 RAD51B 0 . . . 4.88 87.41 27 5.2 No 18 1.27 Yes 0 0 No -26 0.67 Yes 40 92.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69051839 + NM_133509 RAD51B 0 . . . 9.46 91.98 15 5.39 No 69 -2.76 No 0 0 No -28 0.2 No 35 86.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190702397 + NM_000534 PMS1 0 . . . 1.32 71.09 58 7.5 Yes 38 -3.48 No 0 0 No -21 0.69 Yes 45 56.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89646179 + NM_000314 PTEN 0 . . . 2.26 0 32 5.74 Yes 71 0.87 Yes 0 0 No -31 0.77 Yes 37 60.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68340662 + NM_133509 RAD51B 0 . . . 2.53 71.71 14 4.42 No 65 -4.15 No 0 0 No -32 0.47 No 44 62.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41278989 - NM_007294 BRCA1 0 . . . 7.8 79.63 14 4.99 No 49 -2.75 No 0 0 No -16 0.37 No 50 29.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68305837 + NM_133509 RAD51B 0 . . . 6.57 83.96 33 6.54 Yes 13 0.81 Yes 0 0 No -32 0.74 Yes 45 92.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21982937 - NM_000077 CDKN2A 0 . . . 1.53 73.33 19 5 No 32 -4.03 No 0 0 No -18 0.65 No 57 28.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89710476 + NM_000314 PTEN 0 . . . 4.69 83.11 21 5.19 No 50 0.32 No 0 0 No -23 0.7 Yes 42 70.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131972456 + NM_005732 RAD50 0 . . . 0.62 69.83 22 5.75 Yes 59 1.31 Yes 0 0 No -24 0.83 Yes 38 27.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131939013 + NM_005732 RAD50 0 . . . 0.57 77.08 27 6.75 Yes 59 0.87 Yes 0 0 No -26 0.59 No 23 85.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190742859 + NM_000534 PMS1 0 . . . 0.34 68.53 20 5.74 Yes 55 1.11 Yes 0 0 No -19 0.88 Yes 46 84.75 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68789402 + NM_133509 RAD51B 0 . . . 5.45 93.27 25 5.57 Yes 7 0.27 No 0 0 No -24 0.72 Yes 51 67.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94162657 - NM_005591 MRE11 0 . . . 5.02 69.24 21 4.82 No 53 0.62 No 0 0 No -21 0.63 No 44 43.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68531796 + NM_133509 RAD51B 0 . . . 2.86 66.32 46 6.78 Yes 48 0.61 No 0 0 No -45 0.68 Yes 46 65.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68794874 + NM_133509 RAD51B 0 . . . 2.3 69.03 28 5.37 No 71 0.12 No 0 0 No -27 0.88 Yes 51 85.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68648001 + NM_133509 RAD51B 0 . . . 3 66.67 14 4.34 No 10 0.06 No 0 0 No -25 0.85 Yes 45 90.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84393053 - NM_139076 FAM175A 0 . . . 4.16 75.16 22 5.29 No 22 1.17 Yes 0 0 No -23 0.85 Yes 41 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59841299 - NM_032043 BRIP1 0 . . . 2.97 70.83 12 4.24 No 45 -4.89 No 0 0 No -59 0.75 Yes 32 53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68971188 + NM_133509 RAD51B 0 . . . 4.29 75.31 34 6.19 Yes 8 0.8 Yes 0 0 No -24 0.79 Yes 50 75.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59817656 - NM_032043 BRIP1 0 . . . 5.55 89.33 25 5.48 No 68 -3 No 0 0 No -24 0.85 Yes 51 45.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89685517 + NM_000314 PTEN 0 . . . 2.13 78.56 20 5.1 No 56 -5.17 No 0 0 No -19 0.4 No 45 92.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68365974 + NM_133509 RAD51B 0 . . . 2.41 72.33 20 4.1 No 37 1.41 Yes 0 0 No -23 0.9 Yes 21 94.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68294762 + NM_133509 RAD51B 0 . . . 9.91 87.76 27 5.29 No 55 0.54 No 0 0 No -26 0.89 Yes 49 47.85 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69103271 + NM_133509 RAD51B 0 . . . 2.39 76.63 22 4.78 No 58 -3.88 No 0 0 No -21 0.85 Yes 43 55.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68831736 + NM_004360 CDH1 0 . . . 2.87 75.39 28 5.38 No 41 0.4 No 0 0 No -27 0.62 No 51 92.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94190625 - NM_005591 MRE11 0 . . . 9.64 91.09 28 5.46 No 61 1.04 Yes 0 0 No -27 0.73 Yes 45 76.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47792787 + NM_000251 MSH2 0 . . . 2.46 72.7 32 4.33 No 22 -1.64 No 0 0 No -31 0.9 Yes 37 55.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108138788 + NM_000051 ATM 0 . . . 4.33 80.48 15 4.46 No 49 0.16 No 0 0 No -28 0.49 No 48 62.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21983458 - NM_000077 CDKN2A 0 . . . 4.26 70.2 29 5.55 No 14 0.87 Yes 0 0 No -21 0.41 No 33 55.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215652210 - NM_000465 BARD1 0 . . . 6.6 90.91 23 4.69 No 29 0.74 No 0 0 No -22 0.88 Yes 45 83.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59916745 - NM_032043 BRIP1 0 . . . 1.3 59.47 16 4.8 No 41 0.36 No 0 0 No -16 0.34 No 12 25.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68794489 + NM_004360 CDH1 0 . . . 3.27 66.85 23 5.39 No 40 0.35 No 0 0 No -22 0.77 Yes 29 74.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190712767 + NM_000534 PMS1 0 . . . 8.5 87.93 15 4.51 No 8 0.59 No 0 0 No -26 0.67 Yes 50 82.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68580447 + NM_133509 RAD51B 0 . . . 2.98 79.07 26 5.19 No 50 0.18 No 0 0 No -25 0.8 Yes 47 68.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6025538 - NM_000535 PMS2 0 . . . 1.84 76.9 28 5.29 No 39 1.17 Yes 0 0 No -27 0.79 Yes 19 91.43 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29091478 - NM_001005735 CHEK2 0 . . . 5.91 83.74 15 5.05 No 7 1.14 Yes 0 0 No -25 0.48 No 51 87.22 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40992681 + NM_001164269 RAD51 0 . . . 0.75 61.15 16 3.62 No 57 0.91 Yes 0 0 No -36 0.39 No 41 48.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68848202 + NM_004360 CDH1 0 . . . 0.46 72.59 27 5.35 No 14 0.73 No 0 0 No -26 0.92 Yes 44 95.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89720020 + NM_000314 PTEN 0 . . . 1.05 83.21 24 5.33 No 53 0.65 No 0 0 No -22 0.73 Yes 50 59.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131948928 + NM_005732 RAD50 0 . . . 3.17 66.63 16 5.83 Yes 32 1.52 Yes 0 0 No -27 0.33 No 48 72.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108164976 + NM_000051 ATM 0 . . . 4.05 68.1 68 10.03 Yes 51 0.95 Yes 0 0 No -29 0.7 Yes 41 53.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215669899 - NM_000465 BARD1 0 . . . 1.45 56.34 25 4.08 No 54 -3.77 No 0 0 No -25 0.72 Yes 42 94.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68459055 + NM_133509 RAD51B 0 . . . 1.13 71.83 49 7.54 Yes 43 -4.9 No 0 0 No -36 0.67 Yes 49 50.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59828261 - NM_032043 BRIP1 0 . . . 4.62 87.13 14 4.47 No 39 1.06 Yes 0 0 No -23 0.41 No 19 35.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68980485 + NM_133509 RAD51B 0 . . . 1.44 75.2 28 4.01 No 34 1.9 Yes 0 0 No -21 0.69 Yes 24 71.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47686969 + NM_000251 MSH2 0 . . . 2.78 70.85 30 4.56 No 23 1.59 Yes 0 0 No -29 0.73 Yes 40 74.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37047216 + NM_000249 MLH1 0 . . . 6.67 75.16 28 5.39 No 63 0.8 Yes 0 0 No -27 0.94 Yes 47 67.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108115253 + NM_000051 ATM 0 . . . 1.3 67.95 18 4.8 No 23 0.24 No 0 0 No -44 0.9 Yes 35 40.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37055491 + NM_000249 MLH1 0 . . . 4.85 73.55 30 5.35 No 57 1.65 Yes 0 0 No -25 0.55 No 47 41.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68844379 + NM_133509 RAD51B 0 . . . 3.55 77.62 33 6.08 Yes 67 -0.05 No 0 0 No -35 0.63 No 18 22.02 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75508553 - NM_001040108 MLH3 0 . . . 0.48 59.94 34 6.58 Yes 69 -6.18 No 0 0 No -33 0.62 No 51 80.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69049323 + NM_133509 RAD51B 0 . . . 1.68 71.57 24 5.2 No 51 -4.28 No 0 0 No -23 0.93 Yes 23 21.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21970734 - NM_000077 CDKN2A 0 . . . 7.84 84.94 18 4.47 No 15 1.25 Yes 0 0 No -17 0.57 No 43 71.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48022115 + NM_000179 MSH6 0 . . . 3.6 85.02 24 5.92 Yes 4 1.05 Yes 0 0 No -28 0.55 No 54 69.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108175204 + NM_000051 ATM 0 . . . 0.33 67.77 22 4.79 No 63 -5.17 No 0 0 No -21 0.47 No 42 93.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69147626 + NM_133509 RAD51B 0 . . . 4.36 82.13 21 4.69 No 75 -4.21 No 0 0 No -20 0.38 No 46 89.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69111203 + NM_133509 RAD51B 0 . . . 0.18 0 30 6.42 Yes 70 -4.68 No 0 0 No -25 0.81 Yes 56 27.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29115640 - NM_001005735 CHEK2 0 . . . 1.24 57.92 29 5.27 No 28 0.75 No 0 0 No -26 0.62 No 47 65.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89641423 + NM_000314 PTEN 0 . . . 4.72 64.76 16 5.1 No 58 0.43 No 0 0 No -20 0.53 No 48 64.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47681204 + NM_000251 MSH2 0 . . . 3.31 77.25 35 7.67 Yes 28 0.4 No 0 0 No -34 0.82 Yes 41 52.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94205164 - NM_005591 MRE11 0 . . . 6.47 72.54 35 6.17 Yes 59 0.76 No 0 0 No -22 0.42 No 35 48.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190689593 + NM_000534 PMS1 0 . . . 3.44 62.65 31 6.69 Yes 75 0.73 No 0 0 No -30 0.8 Yes 42 49.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131982228 + NM_005732 RAD50 0 . . . 1.54 68.82 15 6.4 Yes 12 1.62 Yes 0 0 No -32 0.52 No 46 93.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89665089 + NM_000314 PTEN 0 . . . 0.46 71.76 32 6.09 Yes 56 2.07 Yes 0 0 No -31 0.58 No 14 52.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6034622 - NM_000535 PMS2 0 . . . 1.75 80.17 44 8.54 Yes 73 0.44 No 0 0 No -44 0.64 No 49 40.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68620111 + NM_133509 RAD51B 0 . . . 1.92 0 15 5.65 Yes 37 1.08 Yes 0 0 No -59 0.85 Yes 46 88.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68782117 + NM_004360 CDH1 0 . . . 2.32 65.88 28 6.56 Yes 16 1.41 Yes 0 0 No -27 0.81 Yes 42 92.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40994414 + NM_001164269 RAD51 0 . . . 0.06 0 20 4.8 No 48 0.15 No 0 0 No -28 0.87 Yes 58 23.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89689258 + NM_000314 PTEN 0 . . . 6.17 79.38 38 3.98 No 55 1.39 Yes 0 0 No -28 0.58 No 43 57.57 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68759473 + NM_133509 RAD51B 0 . . . 2.53 72.83 52 7.61 Yes 53 -3.84 No 0 0 No -19 0.68 Yes 44 37.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32896938 + NM_000059 BRCA2 0 . . . 4.13 76.94 25 5.38 No 19 0.66 No 0 0 No -24 0.57 No 39 63.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68960141 + NM_133509 RAD51B 0 . . . 1.97 74.09 17 4.38 No 70 -1.92 No 0 0 No -24 0.4 No 54 52.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90990813 - NM_002485 NBN 0 . . . 2.47 68.29 16 4.38 No 25 0.23 No 0 0 No -41 0.91 Yes 27 59.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29081835 - NM_001005735 CHEK2 0 . . . 1.26 77.14 65 7.63 Yes 72 0.21 No 0 0 No -34 0.63 No 37 54.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68923840 + NM_133509 RAD51B 0 . . . 2.51 75.18 25 3.92 No 33 0.9 Yes 0 0 No -18 0.78 Yes 21 37.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69112915 + NM_133509 RAD51B 0 . . . 3.52 69.83 36 7.29 Yes 59 -3.73 No 0 0 No -35 0.6 No 48 36.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68318065 + NM_133509 RAD51B 0 . . . 0.52 76.43 28 5.37 No -3 0.4 No 0 0 No -25 0.47 No 42 40.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68411905 + NM_133509 RAD51B 0 . . . 0.91 62.36 22 4.8 No 33 0.31 No 0 0 No -21 0.76 Yes 44 79.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45804790 - NM_001048171 MUTYH 0 . . . 5.08 79.16 22 5.74 Yes -1 0.9 Yes 0 0 No -21 0.75 Yes 41 76.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41278838 - NM_007294 BRCA1 0 . . . 0.87 70.86 18 5.56 Yes NA NA NA 0 0 No -24 0.41 No 37 90.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215674821 - NM_000465 BARD1 0 . . . 4.49 74.48 13 4.36 No 73 0.89 Yes 0 0 No -53 0.22 No 26 80.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47718435 + NM_000251 MSH2 0 . . . 6.03 78.78 21 4.8 No 30 1.2 Yes 0 0 No -20 0.59 No 28 60.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56779165 + NM_058216 RAD51C 0 . . . 3.3 63.59 21 4.69 No 56 1.34 Yes 0 0 No -21 0.73 Yes 56 47.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41276741 - NM_007294 BRCA1 0 . . . 1.18 64.85 13 4.36 No 41 -3.28 No 0 0 No -37 0.36 No 47 12.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108217718 + NM_000051 ATM 0 . . . 4.45 69.06 37 7.07 Yes 70 0.64 No 0 0 No -36 0.7 Yes 40 76.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40988191 + NM_001164269 RAD51 0 . . . 0.93 84.22 21 5.16 No 33 1.12 Yes 0 0 No -49 0.64 No 50 38.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68739220 + NM_133509 RAD51B 0 . . . 5.03 75.95 22 4.85 No 76 1.02 Yes 0 0 No -26 0.7 Yes 44 62.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131893255 + NM_005732 RAD50 0 . . . 1.69 0 17 4.58 No 70 -5.72 No 0 0 No -16 0.84 Yes 23 31.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41249123 - NM_007294 BRCA1 0 . . . 5.4 0 33 4.79 No 61 1.27 Yes 0 0 No -32 0.77 Yes 50 52.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68863142 + NM_004360 CDH1 0 . . . 1.7 71.98 16 5.05 No 4 0.98 Yes 0 0 No -20 0.73 Yes 43 56.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68346529 + NM_133509 RAD51B 0 . . . 2.72 71.32 29 5.36 No 67 1.33 Yes 0 0 No -23 0.56 No 44 46.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190705453 + NM_000534 PMS1 0 . . . 3.12 64.17 35 7.31 Yes 28 -3.78 No 0 0 No -34 0.86 Yes 46 49.47 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59864848 - NM_032043 BRIP1 0 . . . 3.84 77.54 9 3.87 No 0 0.24 No 0 0 No -25 0.22 No 43 84.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41210889 - NM_007294 BRCA1 0 . . . 7.59 80.91 34 7.85 Yes 15 1.36 Yes 0 0 No -33 0.72 Yes 43 94.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23624938 - NM_024675 PALB2 0 . . . 5.72 90.92 19 5.57 Yes 43 0.73 No 0 0 No -24 0.8 Yes 15 63.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68427207 + NM_133509 RAD51B 0 . . . 6.61 86.76 16 5.29 No 11 -2.2 No 0 0 No -22 0.44 No 47 58.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105208445 + NM_021930 RINT1 0 . . . 2.41 76.04 10 4 No 60 -4.19 No 0 0 No -31 0.38 No 52 27.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21987612 - NM_000077 CDKN2A 0 . . . 2.66 82.83 25 6.13 Yes 51 -3.16 No 0 0 No -24 0.71 Yes 51 53.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108127365 + NM_000051 ATM 0 . . . 4.38 73.2 22 5.29 No 47 -2.57 No 0 0 No -24 0.45 No 44 79.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47719568 + NM_000251 MSH2 0 . . . 1.99 75.55 43 6.48 Yes 75 -5.34 No 0 0 No -35 0.66 No 47 76.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68812835 + NM_004360 CDH1 0 . . . 1.96 75.22 97 8.03 Yes -2 0.37 No 0 0 No -27 0.36 No 60 61.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68484229 + NM_133509 RAD51B 0 . . . 7.61 85.07 24 7 Yes 71 0.28 No 0 0 No -23 0.85 Yes 49 71.12 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68569531 + NM_133509 RAD51B 0 . . . 1.36 71.25 13 5.09 No -2 -1.2 No 0 0 No -12 0.46 No 33 34.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32897664 + NM_000059 BRCA2 0 . . . 2.43 59.1 30 4.9 No 73 0.17 No 0 0 No -29 0.79 Yes 46 45.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37069031 + NM_000249 MLH1 0 . . . 9.03 91.38 33 6.51 Yes 9 1.19 Yes 0 0 No -32 0.87 Yes 49 89.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69032519 + NM_133509 RAD51B 0 . . . 0.36 62.86 24 5.1 No 71 1.96 Yes 0 0 No -23 0.88 Yes 26 84.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68708801 + NM_133509 RAD51B 0 . . . 0.94 0 12 5.2 No 39 1.39 Yes 0 0 No -40 0.54 No 19 60.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32949775 + NM_000059 BRCA2 0 . . . 5.39 81.49 22 4.96 No 74 0.17 No 0 0 No -21 0.89 Yes 47 58.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7589408 - NM_000546 TP53 0 . . . 4.99 85.38 34 6 Yes 66 -2.5 No 0 0 No -29 0.59 No 51 60.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89641994 + NM_000314 PTEN 0 . . . 3.81 61.25 30 4.69 No 50 0.94 Yes 0 0 No -26 0.68 Yes 44 63.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68473380 + NM_133509 RAD51B 0 . . . 2.94 67.64 15 5.13 No 59 0.22 No 0 0 No -21 0.33 No 49 70.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56774868 + NM_058216 RAD51C 0 . . . 0.82 76.63 14 4.47 No 75 -4.95 No 0 0 No -27 0.1 No 43 47.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108188840 + NM_000051 ATM 0 . . . 1.34 67.1 44 6.48 Yes 64 0.5 No 0 0 No -43 0.68 Yes 54 76.94 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108177504 + NM_000051 ATM 0 . . . 4.21 71.77 51 7.81 Yes 43 1.01 Yes 0 0 No -26 0.62 No 43 68.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29104783 - NM_001005735 CHEK2 0 . . . 3.25 80.12 40 7.05 Yes 8 1.2 Yes 0 0 No -45 0.67 Yes 50 87.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59930852 - NM_032043 BRIP1 0 . . . 0.08 73.97 34 6.15 Yes 10 1.38 Yes 0 0 No -29 0.47 No 48 85.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68712831 + NM_133509 RAD51B 0 . . . 4.84 78.31 30 6 Yes 0 0.29 No 0 0 No -29 0.88 Yes 13 67.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47716604 + NM_000251 MSH2 0 . . . 2.2 68.33 16 5.13 No 69 -4.27 No 0 0 No -20 0.67 Yes 52 69.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69087095 + NM_133509 RAD51B 0 . . . 4.72 60.3 19 4.91 No 9 2.13 Yes 0 0 No -27 0.8 Yes 49 63.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190727519 + NM_000534 PMS1 0 . . . 1.14 70.3 12 4.24 No 20 0.38 No 0 0 No -21 0.81 Yes 38 47.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69141573 + NM_133509 RAD51B 0 . . . 1.25 0 23 4.47 No 46 0.72 No 0 0 No -22 0.48 No 38 56.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68679559 + NM_133509 RAD51B 0 . . . 2.72 69.33 29 6.63 Yes 0 0.7 No 0 0 No -28 0.86 Yes 31 58.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59870174 - NM_032043 BRIP1 0 . . . 0.84 0 14 5.09 No 27 0.46 No 0 0 No -13 0.38 No 44 46.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215626489 - NM_000465 BARD1 0 . . . 1.71 64.19 32 5.59 Yes 46 -5.17 No 0 0 No -34 0.36 No 49 61.2 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48018736 + NM_000179 MSH6 0 . . . 5.67 89.23 22 5.59 Yes 24 1.26 Yes 0 0 No -21 0.55 No 53 47.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215673550 - NM_000465 BARD1 0 . . . 0.46 0 28 5.37 No 10 0.84 Yes 0 0 No -27 0.63 No 36 84.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59826397 - NM_032043 BRIP1 0 . . . 1.88 86.31 165 13.04 Yes 33 1.12 Yes 0 0 No -57 0.11 No 50 47.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68292527 + NM_133509 RAD51B 0 . . . 4.26 71.69 40 7 Yes 64 0.08 No 0 0 No -29 0.74 Yes 50 41.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41242906 - NM_007294 BRCA1 0 . . . 4.84 86.43 21 5.7 Yes 53 -2.15 No 0 0 No -30 0.65 No 38 66.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108109089 + NM_000051 ATM 0 . . . 4.82 74.65 21 4.89 No 2 1.27 Yes 0 0 No -21 0.8 Yes 56 53.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104176365 - NM_001100119 XRCC3 0 . . . 4.41 73 33 6.93 Yes 41 -0.13 No 0 0 No -42 0.5 No 36 85.91 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68321039 + NM_133509 RAD51B 0 . . . 2.68 71.53 35 5.92 Yes 36 -4.1 No 0 0 No -28 0.41 No 54 30.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68665464 + NM_133509 RAD51B 0 . . . 5.8 80.04 36 5.18 No 33 0.87 Yes 0 0 No -27 0.48 No 38 54.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104168021 - NM_001100119 XRCC3 0 . . . 2.41 72.33 15 5.2 No 30 1.26 Yes 0 0 No -26 0.24 No 44 48.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68778673 + NM_133509 RAD51B 0 . . . 3.65 79.26 15 5.57 Yes 45 -3.87 No 0 0 No -24 0.87 Yes 36 74.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108198923 + NM_000051 ATM 0 . . . 2.43 62.6 23 6.21 Yes 40 1.48 Yes 0 0 No -22 0.57 No 18 82.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68952409 + NM_133509 RAD51B 0 . . . 6.53 87.04 58 7.42 Yes 6 1.83 Yes 0 0 No -24 0.87 Yes 52 64.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32900020 + NM_000059 BRCA2 0 . . . 0.91 75.07 34 6.95 Yes 9 -2.79 No 0 0 No -33 0.77 Yes 44 76.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59803588 - NM_032043 BRIP1 0 . . . 0.62 63.61 16 4.69 No 62 0.49 No 0 0 No -36 0.37 No 12 25.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68537929 + NM_133509 RAD51B 0 . . . 2.68 77.02 30 5.48 No 75 0.42 No 0 0 No -29 0.84 Yes 49 71.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37047640 + NM_000249 MLH1 0 . . . 5.21 84.22 36 5.92 Yes 33 1.04 Yes 0 0 No -25 0.56 No 50 95.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47732926 + NM_000251 MSH2 0 . . . 6.46 84.18 20 4.72 No -3 0.67 No 0 0 No -19 0.77 Yes 46 42.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59929426 - NM_032043 BRIP1 0 . . . 3.97 81.7 38 6.17 Yes 64 0.68 No 0 0 No -33 0.52 No 43 86.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68580685 + NM_133509 RAD51B 0 . . . 0.7 74.45 23 5.39 No -4 0.55 No 0 0 No -22 0.65 No 46 45.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59823835 - NM_032043 BRIP1 0 . . . 8.66 85.06 31 7.87 Yes 16 1.03 Yes 0 0 No -30 0.93 Yes 42 52.04 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41025839 + NM_001164269 RAD51 0 . . . 1.37 0 17 5.48 No 7 0.49 No 0 0 No -23 0.7 Yes 28 83.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32936978 + NM_000059 BRCA2 0 . . . 9.51 74.37 27 5.1 No 29 1.09 Yes 0 0 No -27 0.58 No 43 64.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131907800 + NM_005732 RAD50 0 . . . 1.76 75.96 15 5.92 Yes 72 0.95 Yes 0 0 No -29 0.32 No 49 49.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32970321 + NM_000059 BRCA2 0 . . . 0.99 67.96 30 5.14 No 33 1.02 Yes 0 0 No -29 0.68 Yes 42 40.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59878110 - NM_032043 BRIP1 0 . . . 1.7 74.19 44 4.58 No 7 0.34 No 0 0 No -28 0.45 No 51 77.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59824972 - NM_032043 BRIP1 0 . . . 5.87 79.1 14 4.99 No 15 0.48 No 0 0 No -18 0.62 No 43 89.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47709516 + NM_000251 MSH2 0 . . . 2.1 74.15 36 7.25 Yes 75 1.31 Yes 0 0 No -35 0.6 No 51 69.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190675038 + NM_000534 PMS1 0 . . . 3.07 65.28 24 4.82 No 0 -2.42 No 0 0 No -21 0.51 No 50 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89684954 + NM_000314 PTEN 0 . . . 1.91 75.04 45 7 Yes 1 1.88 Yes 0 0 No -20 0.32 No 44 59.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56779591 + NM_058216 RAD51C 0 . . . 5.31 80.02 17 4.8 No 3 1.76 Yes 0 0 No -18 0.61 No 43 46.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190688511 + NM_000534 PMS1 0 . . . 5.83 96.79 16 4.69 No 7 0.2 No 0 0 No -45 0.31 No 43 72.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40995931 + NM_001164269 RAD51 0 . . . 3.78 69.35 23 4.91 No 55 1.48 Yes 0 0 No -22 0.75 Yes 33 85.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68813064 + NM_133509 RAD51B 0 . . . 7.8 79.2 33 4.64 No 16 1.56 Yes 0 0 No -27 0.81 Yes 42 93.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68681019 + NM_133509 RAD51B 0 . . . 4 89.54 23 5 No 30 -2.55 No 0 0 No -22 0.75 Yes 52 34.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59816034 - NM_032043 BRIP1 0 . . . 7.82 85.08 26 6 Yes 29 0.11 No 0 0 No -25 0.9 Yes 29 67.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131973156 + NM_005732 RAD50 0 . . . 1.23 0 19 6.1 Yes 52 -3.61 No 0 0 No -24 0.29 No 46 59.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68539419 + NM_133509 RAD51B 0 . . . 5.15 70.11 14 4.9 No 13 0.53 No 0 0 No -25 0.57 No 42 68.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32903739 + NM_000059 BRCA2 0 . . . 1.48 67.6 31 5.39 No 6 0.96 Yes 0 0 No -24 0.45 No 35 90.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68870209 + NM_133509 RAD51B 0 . . . 1.39 0 14 3.87 No 34 0.06 No 0 0 No -32 0.36 No 51 97.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32917645 + NM_000059 BRCA2 0 . . . 0.46 0 19 5.48 No 58 0.41 No 0 0 No -18 0.56 No 53 82.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69046462 + NM_133509 RAD51B 0 . . . 2.53 76.59 28 5.29 No 61 -3.79 No 0 0 No -27 0.65 No 36 43.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68657345 + NM_133509 RAD51B 0 . . . 3.87 77.69 22 4.9 No 33 0.72 No 0 0 No -21 0.88 Yes 45 58.21 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131928994 + NM_005732 RAD50 0 . . . 3.77 63.87 23 7.43 Yes 19 1.49 Yes 0 0 No -22 0.62 No 47 44.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152359452 - NM_005431 XRCC2 0 . . . 4.78 85.06 23 3.73 No 49 0.93 Yes 0 0 No -25 0.47 No 46 47.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108148311 + NM_000051 ATM 0 . . . 3.87 81.82 37 6 Yes NA NA NA 0 0 No -25 0.6 No 51 34.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68336623 + NM_133509 RAD51B 0 . . . 5.62 88.36 18 5.01 No 8 0.68 No 0 0 No -23 0.48 No 50 89.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23634867 - NM_024675 PALB2 0 . . . 2.53 78.27 19 5.39 No 72 -3.24 No 0 0 No -33 0.31 No 34 75.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68809457 + NM_004360 CDH1 0 . . . 5.32 73.6 17 5.29 No 33 1.04 Yes 0 0 No -21 0.41 No 25 88.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47653242 + NM_000251 MSH2 0 . . . 2.89 68.34 26 7.77 Yes 21 1.7 Yes 0 0 No -25 0.36 No 37 75.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94213123 - NM_005591 MRE11 0 . . . 3.24 72 39 5.93 Yes 66 1.18 Yes 0 0 No -26 0.8 Yes 46 70.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68779070 + NM_004360 CDH1 0 . . . 1.86 76.06 26 6.32 Yes 4 -0.77 No 0 0 No -25 0.78 Yes 51 41.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40985628 + NM_001164269 RAD51 0 . . . 3.51 75.88 26 5.29 No -2 1.1 Yes 0 0 No -25 0.88 Yes 46 41.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68754456 + NM_133509 RAD51B 0 . . . 3.18 67.27 12 4.24 No 38 0.76 No 0 0 No -34 0.23 No 20 74.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94178876 - NM_005591 MRE11 0 . . . 0.2 57.82 18 4.53 No 68 0.14 No 0 0 No -24 0.56 No 39 61.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68430453 + NM_133509 RAD51B 0 . . . 4.4 72.45 24 5.47 No 1 1.08 Yes 0 0 No -23 0.82 Yes 47 44.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47687973 + NM_000251 MSH2 0 . . . 5.38 78.29 18 4.36 No 0 1.1 Yes 0 0 No -32 0.45 No 45 75.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68393206 + NM_133509 RAD51B 0 . . . 3.05 77.57 18 5.09 No 15 0.63 No 0 0 No -23 0.6 No 43 95.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69093959 + NM_133509 RAD51B 0 . . . 2.2 70.29 23 3.95 No -3 0.32 No 0 0 No -22 0.4 No 42 42.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68982621 + NM_133509 RAD51B 0 . . . 4.71 84.22 30 5.79 Yes 33 1.05 Yes 0 0 No -29 0.87 Yes 50 93.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68364705 + NM_133509 RAD51B 0 . . . 0.46 61.28 32 5.92 Yes 42 0.12 No 0 0 No -31 0.5 No 41 93.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47690379 + NM_000251 MSH2 0 . . . 0.16 69.02 27 4.52 No 45 0.82 Yes 0 0 No -26 0.49 No 49 93.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89702512 + NM_000314 PTEN 0 . . . 5.13 79.43 17 4.76 No -3 1.25 Yes 0 0 No -44 0.61 No 46 58.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190686979 + NM_000534 PMS1 0 . . . 1.79 66.52 38 6.48 Yes 50 0.41 No 0 0 No -37 0.82 Yes 56 28.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89684920 + NM_000314 PTEN 0 . . . 1.01 0 24 5.28 No 15 0.99 Yes 0 0 No -23 0.31 No 43 63.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68712800 + NM_133509 RAD51B 0 . . . 8.62 85.5 26 5.09 No 39 -2.99 No 0 0 No -25 0.79 Yes 44 93.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59941664 - NM_032043 BRIP1 0 . . . 3.84 67.36 25 5.27 No 39 0.18 No 0 0 No -24 0.72 Yes 23 50.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37072174 + NM_000249 MLH1 0 . . . 7.21 78.67 16 4.12 No 22 1.47 Yes 0 0 No -51 0.41 No 36 86.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68287052 + NM_133509 RAD51B 0 . . . 1.03 75.41 14 5.38 No 7 0.25 No 0 0 No -25 0.59 No 46 73.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68922829 + NM_133509 RAD51B 0 . . . 1.6 62.63 24 5.48 No 75 -6.44 No 0 0 No -20 0.52 No 46 33.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68355858 + NM_133509 RAD51B 0 . . . 9.07 83.71 36 4.46 No 30 1.21 Yes 0 0 No -22 0.54 No 42 58.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68779822 + NM_004360 CDH1 0 . . . 3.92 73 13 3.95 No 16 0.49 No 0 0 No -23 0.77 Yes 42 82.04 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23636570 - NM_024675 PALB2 0 . . . 1.94 68.72 30 4.93 No 16 0.59 No 0 0 No -29 0.68 Yes 42 94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68511015 + NM_133509 RAD51B 0 . . . 2.85 71.12 38 6.31 Yes 47 -2.55 No 0 0 No -23 0.67 Yes 48 58.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21984662 - NM_000077 CDKN2A 0 . . . 3.36 79.21 27 5.15 No 3 0.73 No 0 0 No -47 0.26 No 45 73.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32950773 + NM_000059 BRCA2 0 . . . 6.25 86.91 36 6.04 Yes 51 0.5 No 21 0.65 Yes -31 0.49 No 44 81.1 Yes BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: Yes chr11 108220933 + NM_000051 ATM 0 . . . 5.85 81.13 12 5.7 Yes 37 -3.19 No 0 0 No -15 0.3 No 45 74.8 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94181686 - NM_005591 MRE11 0 . . . 7.58 88.47 39 5.7 Yes 66 1.43 Yes 0 0 No -38 0.71 Yes 35 74.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41006802 + NM_001164269 RAD51 0 . . . 0.61 58.83 10 5.47 No 76 -5.27 No 0 0 No -29 0.47 No 46 44.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215620723 - NM_000465 BARD1 0 . . . 1.09 70.66 23 4.9 No 12 0.51 No 0 0 No -20 0.49 No 23 49.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37083203 + NM_000249 MLH1 0 . . . 2.8 73.41 30 5.36 No 54 0.13 No 0 0 No -55 0.25 No 36 36.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90980410 - NM_002485 NBN 0 . . . 4.17 86.98 68 6.23 Yes 9 1.13 Yes 0 0 No -34 0.31 No 49 93.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68312645 + NM_133509 RAD51B 0 . . . 0.04 0 21 5.04 No 68 1.23 Yes 0 0 No -20 0.64 No 49 59.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152345785 - NM_005431 XRCC2 0 . . . 2.36 67.36 17 4.9 No 3 0.57 No 0 0 No -20 0.4 No 46 84.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37051535 + NM_000249 MLH1 0 . . . 6.24 82.31 28 5.83 Yes 3 0.46 No 0 0 No -27 0.68 Yes 55 54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68438081 + NM_133509 RAD51B 0 . . . 6 81.74 19 4.81 No 17 -2.27 No 0 0 No -29 0.25 No 41 71.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41216463 - NM_007294 BRCA1 0 . . . 8.87 86.02 34 4.59 No 57 0.73 No 0 0 No -26 0.85 Yes 31 76.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69134471 + NM_133509 RAD51B 0 . . . 2.23 71.57 28 6.21 Yes 70 -3.83 No 0 0 No -27 0.65 No 48 91.61 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68492737 + NM_133509 RAD51B 0 . . . 7.7 69.3 29 5.7 Yes 1 0.68 No 0 0 No -28 0.88 Yes 44 76.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47804193 + NM_000251 MSH2 0 . . . 1.66 84.5 28 5.38 No 33 1.25 Yes 0 0 No -27 0.84 Yes 25 67.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59780378 - NM_032043 BRIP1 0 . . . 0.89 65.33 24 5.29 No 66 0.2 No 0 0 No -23 0.55 No 56 40.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68352719 + NM_133509 RAD51B 0 . . . 2.61 72.91 21 4.42 No 75 0.4 No 0 0 No -20 0.79 Yes 52 69.61 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56768273 + NM_058216 RAD51C 0 . . . 3.08 72.13 10 5.1 No 33 0.84 Yes 0 0 No -21 0.41 No 43 49.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215652344 - NM_000465 BARD1 0 . . . 4.4 87.79 22 6.01 Yes 64 0.37 No 0 0 No -21 0.45 No 49 72.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108129433 + NM_000051 ATM 0 . . . 2.18 74.27 17 3.64 No 16 1.42 Yes 0 0 No -30 0.41 No 41 68.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69043586 + NM_133509 RAD51B 0 . . . 3.98 86.78 18 4.53 No 45 0.81 Yes 0 0 No -17 0.49 No 38 59.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47673882 + NM_000251 MSH2 0 . . . 3.48 83.86 13 4.19 No 31 0.44 No 0 0 No -19 0.39 No 32 80.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108181174 + NM_000051 ATM 0 . . . 1.98 81.54 19 5.56 No 52 0.33 No 0 0 No -30 0.64 No 48 64.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68833459 + NM_133509 RAD51B 0 . . . 5.41 66.08 35 5.04 No 13 0.79 Yes 0 0 No -27 0.63 No 45 71.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68445271 + NM_133509 RAD51B 0 . . . 8.63 77.21 37 6.44 Yes 39 1.15 Yes 0 0 No -36 0.65 No 37 51.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37065888 + NM_000249 MLH1 0 . . . 5.04 65.76 26 5.2 No 23 1.36 Yes 0 0 No -25 0.93 Yes 43 91.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215634968 - NM_000465 BARD1 0 . . . 1.31 63.3 16 5.57 Yes 66 -2.89 No 0 0 No -24 0.64 No 53 37.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41262266 - NM_007294 BRCA1 0 . . . 5.77 80.4 19 6.45 Yes 1 0.14 No 0 0 No -30 0.58 No 45 43.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108207158 + NM_000051 ATM 0 . . . 3.69 68.13 19 5 No 34 0.03 No 0 0 No -18 0.57 No 53 36.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68404020 + NM_133509 RAD51B 0 . . . 5.28 78 43 6.64 Yes 21 0.86 Yes 0 0 No -28 0.64 No 37 73.8 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68748263 + NM_133509 RAD51B 0 . . . 0.69 75.51 15 5.2 No 76 -4.66 No 0 0 No -22 0.67 Yes 47 37.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75519565 - NM_001040108 MLH3 0 . . . 5.77 73.11 15 3.69 No 63 1.12 Yes 0 0 No -20 0.78 Yes 45 66.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84381839 - NM_139076 FAM175A 0 . . . 6.42 82.31 16 4.68 No 3 1.17 Yes 0 0 No -20 0.44 No 55 65.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68435555 + NM_133509 RAD51B 0 . . . 2.52 0 21 4.69 No 28 1.24 Yes 0 0 No -20 0.47 No 30 85.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215600800 - NM_000465 BARD1 0 . . . 1.15 63.77 28 5.38 No 43 0.34 No 0 0 No -27 0.71 Yes 40 58.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68916021 + NM_133509 RAD51B 0 . . . 3.69 65.37 23 5.72 Yes 10 0.46 No 0 0 No -22 0.46 No 48 90.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29129933 - NM_001005735 CHEK2 0 . . . 5.72 0 18 4.98 No 61 -2.11 No 0 0 No -21 0.54 No 43 43.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47728109 + NM_000251 MSH2 0 . . . 2.24 80.12 17 5.96 Yes 7 1.16 Yes 0 0 No -21 0.5 No 51 87.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108198744 + NM_000051 ATM 0 . . . 4.65 87.76 20 3.89 No 51 0.28 No 0 0 No -19 0.64 No 21 65.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23645661 - NM_024675 PALB2 0 . . . 6.02 75.93 21 5.12 No 33 0.23 No 0 0 No -20 0.65 No 38 67.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75485564 - NM_001040108 MLH3 0 . . . 3.77 68.94 14 5.5 No 41 0.94 Yes 0 0 No -49 0.51 No 43 96.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69067553 + NM_133509 RAD51B 0 . . . 3.27 71.38 23 5.48 No 67 0.95 Yes 0 0 No -22 0.6 No 42 85.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68791481 + NM_004360 CDH1 0 . . . 6.48 84.61 21 4.99 No 46 0.07 No 0 0 No -24 0.5 No 46 87.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33425053 - NM_002878 RAD51D 0 . . . 2.31 0 23 5.37 No 24 1.2 Yes 0 0 No -22 0.84 Yes 34 59.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68469972 + NM_133509 RAD51B 0 . . . 6.14 76.49 33 5.74 Yes 2 0.89 Yes 0 0 No -18 0.54 No 44 75.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1226640 + NM_000455 STK11 0 . . . 0.3 66.56 39 6.28 Yes NA NA NA 0 0 No -29 0.7 Yes 52 23.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29084556 - NM_001005735 CHEK2 0 . . . 0.88 83.64 39 5.41 No 33 0.99 Yes 0 0 No -38 0.39 No 25 49.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68788153 + NM_004360 CDH1 0 . . . 1.91 71.47 24 5.9 Yes 71 -3.07 No 0 0 No -23 0.93 Yes 44 55.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69080191 + NM_133509 RAD51B 0 . . . 4.58 84.41 18 4.69 No 44 -0.66 No 0 0 No -22 0.77 Yes 37 64.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75490455 - NM_001040108 MLH3 0 . . . 2.69 81.94 24 4.81 No 2 0.28 No 0 0 No -34 0.67 Yes 48 56.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69145508 + NM_133509 RAD51B 0 . . . 0.03 65.48 24 5.29 No 51 0.68 No 0 0 No -23 0.79 Yes 51 26.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32945980 + NM_000059 BRCA2 0 . . . 2.05 78.2 26 7.06 Yes 40 0.02 No 0 0 No -25 0.9 Yes 48 60.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68364485 + NM_133509 RAD51B 0 . . . 4.35 87.56 28 5.41 No 33 0.99 Yes 0 0 No -27 0.85 Yes 50 79.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47665629 + NM_000251 MSH2 0 . . . 10.2 88.83 28 8.7 Yes 12 0.82 Yes 0 0 No -27 0.87 Yes 46 74.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68919613 + NM_133509 RAD51B 0 . . . 2.65 74.68 30 6.92 Yes 67 -6.59 No 0 0 No -33 0.51 No 53 30.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37051481 + NM_000249 MLH1 0 . . . 8.99 84.73 30 5.48 No 59 -0.66 No 0 0 No -29 0.84 Yes 46 75.42 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21992611 - NM_000077 CDKN2A 0 . . . 4.17 0 17 3.75 No 6 0.16 No 0 0 No -29 0.87 Yes 46 29.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59906033 - NM_032043 BRIP1 0 . . . 10.95 86.62 22 7.41 Yes 28 1.61 Yes 0 0 No -21 0.35 No 45 93.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68398943 + NM_133509 RAD51B 0 . . . 9.37 88.87 34 7.59 Yes 73 0.84 Yes 0 0 No -33 0.59 No 41 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32961969 + NM_000059 BRCA2 0 . . . 2.79 68.24 31 7.2 Yes 28 2.22 Yes 0 0 No -30 0.91 Yes 30 94.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215633520 - NM_000465 BARD1 0 . . . 8.28 75.18 26 5.51 No 11 1.29 Yes 0 0 No -34 0.51 No 47 72.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69043847 + NM_133509 RAD51B 0 . . . 1.51 0 29 6.37 Yes 57 -2.99 No 0 0 No -28 0.52 No 50 42.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32908669 + NM_000059 BRCA2 0 . . . 1.41 78.12 52 5.1 No 47 -2.9 No 0 0 No -29 0.63 No 50 57.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131925913 + NM_005732 RAD50 0 . . . 1.43 74.23 48 9.63 Yes 57 1.26 Yes 0 0 No -47 0.9 Yes 32 63.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41014213 + NM_001164269 RAD51 0 . . . 6.47 86.46 43 6.98 Yes 36 0.21 No 0 0 No -22 0.6 No 40 48.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68355944 + NM_133509 RAD51B 0 . . . 2.51 75.46 22 4.33 No 35 0.75 No 0 0 No -21 0.92 Yes 12 63.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32951480 + NM_000059 BRCA2 0 . . . 0.61 74.47 23 5.04 No 57 0.72 No 0 0 No -22 0.81 Yes 54 78.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 52439655 - NM_004656 BAP1 0 . . . 4.49 73.28 31 4.92 No 46 0.53 No 0 0 No -24 0.46 No 45 56.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68864489 + NM_004360 CDH1 0 . . . 3.92 71.81 22 5.15 No 23 0.22 No 0 0 No -21 0.39 No 46 47.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47657447 + NM_000251 MSH2 0 . . . 3.15 68.34 19 5 No 13 1.55 Yes 0 0 No -18 0.78 Yes 45 73.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59838057 - NM_032043 BRIP1 0 . . . 2.94 80.33 49 8.04 Yes 37 0.19 No 0 0 No -41 0.72 Yes 44 35.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47738888 + NM_000251 MSH2 0 . . . 0.19 74.98 28 5.24 No 41 0.09 No 0 0 No -59 0.5 No 50 66.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69134957 + NM_133509 RAD51B 0 . . . 0.86 70.14 19 4.99 No 73 0.85 Yes 0 0 No -27 0.39 No 41 67.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68315433 + NM_133509 RAD51B 0 . . . 4.76 88.12 23 5.18 No 34 -2.74 No 0 0 No -22 0.4 No 48 92.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59813079 - NM_032043 BRIP1 0 . . . 7.97 81.57 16 5.04 No 58 1.45 Yes 0 0 No -20 0.61 No 43 69.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68941183 + NM_133509 RAD51B 0 . . . 4.08 77.81 23 5.3 No 43 0.67 No 0 0 No -43 0.62 No 45 78.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69070044 + NM_133509 RAD51B 0 . . . 9.28 88.31 37 6.93 Yes 50 -3.32 No 0 0 No -31 0.5 No 37 63.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89652332 + NM_000314 PTEN 0 . . . 1.96 62.3 33 6.11 Yes 21 1.14 Yes 0 0 No -28 0.5 No 32 39.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47652952 + NM_000251 MSH2 0 . . . 0.23 67.41 21 5.17 No 40 0.18 No 0 0 No -20 0.79 Yes 15 31.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21988249 - NM_000077 CDKN2A 0 . . . 5.08 77.13 24 5.1 No 75 0.75 No 0 0 No -23 0.93 Yes 38 88.05 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68557033 + NM_133509 RAD51B 0 . . . 0.84 69.42 25 5.7 Yes 38 -2.96 No 0 0 No -24 0.71 Yes 43 47.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68773303 + NM_004360 CDH1 0 . . . 1.67 66.07 28 7.52 Yes 70 -4.65 No 0 0 No -27 0.75 Yes 36 45.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68507815 + NM_133509 RAD51B 0 . . . 7.18 76.62 32 5.68 Yes 16 0.54 No 0 0 No -26 0.9 Yes 42 66.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59834704 - NM_032043 BRIP1 0 . . . 4.24 67.96 18 5.31 No 64 0.78 Yes 0 0 No -23 0.75 Yes 46 54.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69105039 + NM_133509 RAD51B 0 . . . 1.46 83.68 16 4.67 No 10 0.53 No 0 0 No -44 0.65 No 48 58.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23618441 - NM_024675 PALB2 0 . . . 6.67 80.41 31 6.99 Yes 25 0.09 No 0 0 No -30 0.57 No 43 75.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59877014 - NM_032043 BRIP1 0 . . . 9.23 88.57 20 5.47 No 25 0.72 No 0 0 No -19 0.67 Yes 47 63.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37090339 + NM_000249 MLH1 0 . . . 5.68 76.86 17 4.58 No 0 0.92 Yes 0 0 No -16 0.36 No 46 63.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21987931 - NM_000077 CDKN2A 0 . . . 0.96 70.5 13 5.48 No 62 0.28 No 0 0 No -23 0.87 Yes 48 75.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59892053 - NM_032043 BRIP1 0 . . . 0.92 66.27 15 5.98 Yes 65 0.71 No 0 0 No -21 0.61 No 48 85.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108229414 + NM_000051 ATM 0 . . . 2.34 79.87 18 4.58 No 34 -0.91 No 0 0 No -17 0.82 Yes 49 79.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84395766 - NM_139076 FAM175A 0 . . . 1.73 86.71 18 4.84 No 33 1.13 Yes 0 0 No -17 0.45 No 51 49.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68514373 + NM_133509 RAD51B 0 . . . 1.06 80.16 13 6.38 Yes 64 0.48 No 0 0 No -36 0.47 No 45 78.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47693398 + NM_000251 MSH2 0 . . . 5.05 66.92 53 7.37 Yes 40 0.54 No 0 0 No -35 0.75 Yes 47 79.78 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41011848 + NM_001164269 RAD51 0 . . . 1.81 71.02 25 5.83 Yes 61 -3.84 No 0 0 No -19 0.51 No 49 24.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190727414 + NM_000534 PMS1 0 . . . 6.48 83.92 22 5.43 No 65 1.3 Yes 0 0 No -21 0.94 Yes 44 58.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41233983 - NM_007294 BRCA1 0 . . . 2.61 85.99 15 3.9 No 29 0.51 No 0 0 No -15 0.73 Yes 44 67.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56789312 + NM_058216 RAD51C 0 . . . 0.54 74.23 15 3.83 No 8 1.63 Yes 0 0 No -21 0.73 Yes 50 57.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47721350 + NM_000251 MSH2 0 . . . 7.02 82.06 40 5.86 Yes -1 0.82 Yes 0 0 No -37 0.52 No 43 61.34 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89670368 + NM_000314 PTEN 0 . . . 2.15 77.86 33 5.9 Yes 7 1.01 Yes 0 0 No -32 0.4 No 51 85.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41226262 - NM_007294 BRCA1 0 . . . 5.32 68.77 20 4.58 No 71 0.65 No 0 0 No -30 0.27 No 40 88.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68538923 + NM_133509 RAD51B 0 . . . 0.97 0 81 9.25 Yes 74 -1.55 No 0 0 No -43 0.62 No 29 40.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68851201 + NM_004360 CDH1 0 . . . 3.01 80.27 18 4.74 No 55 -1.47 No 0 0 No -18 0.52 No 49 45.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68883508 + NM_133509 RAD51B 0 . . . 1.07 64.82 23 6 Yes 74 0.11 No 0 0 No -22 0.9 Yes 42 62.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68787585 + NM_004360 CDH1 0 . . . 6.76 86.76 13 5.2 No 13 1.14 Yes 0 0 No -28 0.6 No 45 88.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29117017 - NM_001005735 CHEK2 0 . . . 3.49 72.09 32 5.66 Yes 65 -6.45 No 0 0 No -31 0.55 No 44 88.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56797110 + NM_058216 RAD51C 0 . . . 4.74 84.41 27 4.67 No 37 0.85 Yes 0 0 No -26 0.76 Yes 49 74.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23639153 - NM_024675 PALB2 0 . . . 1.08 64.83 26 7.12 Yes 57 0.47 No 0 0 No -25 0.52 No 36 74.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68723163 + NM_133509 RAD51B 0 . . . 6.53 74.99 10 5.39 No 6 0.02 No 0 0 No -23 0.47 No 46 46.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89645361 + NM_000314 PTEN 0 . . . 4.31 69.93 37 6.16 Yes 44 0.6 No 0 0 No -36 0.86 Yes 42 56.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68366029 + NM_133509 RAD51B 0 . . . 2.95 70.85 39 6.1 Yes 21 1.71 Yes 0 0 No -39 0.37 No 37 76.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47656360 + NM_000251 MSH2 0 . . . 2.8 73.79 26 7.22 Yes 39 1.06 Yes 0 0 No -25 0.58 No 19 74.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37070395 + NM_000249 MLH1 0 . . . 1.48 0 24 6.37 Yes 14 1.11 Yes 0 0 No -35 0.58 No 49 56.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215628030 - NM_000465 BARD1 0 . . . 2.66 73.43 28 5.2 No 47 -2.51 No 0 0 No -27 0.81 Yes 38 51.06 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69019936 + NM_133509 RAD51B 0 . . . 1.08 58.21 23 5.1 No 18 1.26 Yes 0 0 No -22 0.4 No 40 88.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52433281 - NM_004656 BAP1 0 . . . 3.75 68.37 21 5.82 Yes 63 1.08 Yes 0 0 No -20 0.78 Yes 53 32.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69083250 + NM_133509 RAD51B 0 . . . 4.28 71.22 12 4.63 No 51 0.15 No 0 0 No -26 0.82 Yes 42 61.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190697933 + NM_000534 PMS1 0 . . . 2.6 0 34 6.32 Yes 8 1.78 Yes 0 0 No -33 0.36 No 36 60.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215663484 - NM_000465 BARD1 0 . . . 8.14 83.87 16 5.66 Yes 31 1.47 Yes 0 0 No -25 0.46 No 27 95.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68924724 + NM_133509 RAD51B 0 . . . 1.36 58.52 21 5.1 No 74 -4.11 No 0 0 No -20 0.84 Yes 36 50.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131899213 + NM_005732 RAD50 0 . . . 0.52 84.26 10 4.8 No 70 -4.43 No 0 0 No -18 0.41 No 48 81.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131951822 + NM_005732 RAD50 0 . . . 0.01 60.58 29 6.31 Yes 67 -5.63 No 0 0 No -28 0.8 Yes 43 24.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89670863 + NM_000314 PTEN 0 . . . 2.12 67.34 36 4.8 No 30 0.97 Yes 0 0 No -25 0.33 No 56 42.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105186639 + NM_021930 RINT1 0 . . . 0.36 65.01 14 3.56 No 34 -2.97 No 0 0 No -21 0.25 No 60 70.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47752015 + NM_000251 MSH2 0 . . . 2.36 69.38 28 5.39 No 55 1.78 Yes 0 0 No -27 0.86 Yes 41 55.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131928713 + NM_005732 RAD50 0 . . . 1.73 0 23 4.9 No 3 1.11 Yes 0 0 No -23 0.57 No 48 76.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94221445 - NM_005591 MRE11 0 . . . 6.47 77.51 17 6.93 Yes 24 0.61 No 0 0 No -16 0.33 No 34 76.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69102276 + NM_133509 RAD51B 0 . . . 2.98 71.14 31 4.06 No 13 -3.01 No 0 0 No -30 0.42 No 45 71.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68558596 + NM_133509 RAD51B 0 . . . 3.82 76.62 25 5.29 No 31 1.21 Yes 0 0 No -24 0.87 Yes 46 51.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59817595 - NM_032043 BRIP1 0 . . . 7.28 87.06 21 5.04 No 57 -2.81 No 0 0 No -25 0.46 No 49 72.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41206914 - NM_007294 BRCA1 0 . . . 1.49 60.45 32 6.12 Yes 37 0.61 No 0 0 No -31 0.58 No 53 67.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75500165 - NM_001040108 MLH3 0 . . . 0.57 67.11 16 5.47 No 23 0.35 No 0 0 No -54 0.72 Yes 22 40.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108135750 + NM_000051 ATM 0 . . . 3.35 68.29 19 5.83 Yes -4 0.49 No 0 0 No -18 0.73 Yes 49 24.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37054332 + NM_000249 MLH1 0 . . . 0.39 0 32 5.36 No 60 1.76 Yes 0 0 No -32 0.9 Yes 44 42.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69122808 + NM_133509 RAD51B 0 . . . 6.95 90.5 17 4.8 No 73 -3.41 No 0 0 No -16 0.58 No 50 40.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131901343 + NM_005732 RAD50 0 . . . 1.06 82.04 32 5.4 No 36 1.16 Yes 0 0 No -24 0.74 Yes 51 76.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68796220 + NM_004360 CDH1 0 . . . 8.47 83.64 38 6.63 Yes 42 1.57 Yes 0 0 No -37 0.69 Yes 43 62.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52439077 - NM_004656 BAP1 0 . . . 1.36 78.07 17 5.57 Yes 1 0.32 No 0 0 No -16 0.66 Yes 42 76.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59875066 - NM_032043 BRIP1 0 . . . 4.52 74.98 21 6.08 Yes 62 1.62 Yes 0 0 No -20 0.94 Yes 47 76.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59860796 - NM_032043 BRIP1 0 . . . 8.85 76.49 20 5.48 No 2 -2.29 No 0 0 No -29 0.75 Yes 45 75.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47680880 + NM_000251 MSH2 0 . . . 3.48 67.56 16 5.54 No 76 -4.83 No 0 0 No -30 0.51 No 44 72.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69093916 + NM_133509 RAD51B 0 . . . 7.4 82.26 31 5.48 No 60 1.51 Yes 0 0 No -47 0.38 No 41 73.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69139194 + NM_133509 RAD51B 0 . . . 1.21 75.86 28 5.38 No 3 0.14 No 0 0 No -27 0.54 No 48 34.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47778664 + NM_000251 MSH2 0 . . . 3.04 72.31 26 5.28 No 39 0.23 No 0 0 No -25 0.95 Yes 44 93.28 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47646847 + NM_000251 MSH2 0 . . . 5.78 73.63 38 6.01 Yes 13 1.08 Yes 0 0 No -37 0.65 No 40 74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69136620 + NM_133509 RAD51B 0 . . . 6.98 80.35 28 5.74 Yes 6 0.78 Yes 0 0 No -26 0.86 Yes 52 79.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41247743 - NM_007294 BRCA1 0 . . . 5.46 78.2 15 5.74 Yes 45 0.22 No 0 0 No -50 0.84 Yes 49 67.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68814628 + NM_004360 CDH1 0 . . . 4.47 68.45 17 4.3 No 32 0.56 No 0 0 No -40 0.95 Yes 51 51.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32905195 + NM_000059 BRCA2 0 . . . 2.13 0 40 6.78 Yes 13 0.81 Yes 0 0 No -39 0.91 Yes 39 83.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68866237 + NM_133509 RAD51B 0 . . . 3.42 70.85 34 6.69 Yes 21 1.3 Yes 0 0 No -33 0.74 Yes 42 75.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69068720 + NM_133509 RAD51B 0 . . . 0.75 68.38 28 7.3 Yes 48 0.83 Yes 0 0 No -27 0.67 Yes 34 61.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59916648 - NM_032043 BRIP1 0 . . . 0.67 60.83 36 7.48 Yes 65 0.39 No 0 0 No -35 0.74 Yes 37 87.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68773693 + NM_004360 CDH1 0 . . . 2.58 80.99 21 4.82 No -1 0.99 Yes 0 0 No -20 0.68 Yes 48 47.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131943040 + NM_005732 RAD50 0 . . . 4.78 73.37 45 6.86 Yes 30 0.66 No 0 0 No -44 0.85 Yes 46 50.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105205774 + NM_021930 RINT1 0 . . . 5.25 80.43 14 4.89 No 2 1.23 Yes 0 0 No -20 0.7 Yes 52 39.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68685367 + NM_133509 RAD51B 0 . . . 6.39 77.65 33 7.07 Yes 1 0.08 No 0 0 No -32 0.86 Yes 44 67.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68799770 + NM_004360 CDH1 0 . . . 1 60.8 23 6.4 Yes 17 0.74 No 0 0 No -27 0.7 Yes 36 59.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68904215 + NM_133509 RAD51B 0 . . . 3.91 88.24 13 4.24 No 32 1.18 Yes 0 0 No -26 0.31 No 26 85.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152353144 - NM_005431 XRCC2 0 . . . 6.92 83.69 13 4.12 No 18 2.22 Yes 0 0 No -24 0.52 No 40 93.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131955916 + NM_005732 RAD50 0 . . . 5.23 79.94 17 4 No 69 0.78 Yes 0 0 No -28 0.54 No 40 69.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68380464 + NM_133509 RAD51B 0 . . . 2.81 67.38 34 6.57 Yes 22 -1.77 No 0 0 No -34 0.84 Yes 48 57.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32955283 + NM_000059 BRCA2 0 . . . 4.55 81.79 22 3.73 No 19 1.03 Yes 0 0 No -25 0.81 Yes 48 79.01 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68387153 + NM_133509 RAD51B 0 . . . 2.17 60.26 20 5.09 No 50 0.72 No 0 0 No -28 0.53 No 28 81.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47693816 + NM_000251 MSH2 0 . . . 1.58 68.12 21 4.8 No 75 -3.26 No 0 0 No -18 0.66 Yes 15 93.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68315902 + NM_133509 RAD51B 0 . . . 9.76 92.42 25 5.34 No 8 0.35 No 0 0 No -22 0.8 Yes 50 80.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68507169 + NM_133509 RAD51B 0 . . . 5.07 75.66 41 6.4 Yes 50 1.12 Yes 0 0 No -34 0.7 Yes 51 76.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59804241 - NM_032043 BRIP1 0 . . . 1.54 57.41 21 5.56 Yes 70 -6.21 No 0 0 No -38 0.38 No 43 57.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59868766 - NM_032043 BRIP1 0 . . . 5.81 74.22 26 5.35 No 59 1.47 Yes 0 0 No -26 0.9 Yes 42 88.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215637720 - NM_000465 BARD1 0 . . . 0.83 63.44 34 6.08 Yes 47 0.1 No 0 0 No -33 0.8 Yes 51 60.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68735660 + NM_133509 RAD51B 0 . . . 2.04 0 35 6.95 Yes 52 -1.18 No 0 0 No -33 0.47 No 18 86.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47676659 + NM_000251 MSH2 0 . . . 6.3 83.48 21 5.2 No 7 1.07 Yes 0 0 No -20 0.88 Yes 51 84.93 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48014308 + NM_000179 MSH6 0 . . . 4.26 69.48 28 6.11 Yes 24 -2.77 No 0 0 No -27 0.28 No 42 61.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89665685 + NM_000314 PTEN 0 . . . 0.32 0 27 5.2 No 4 0.2 No 0 0 No -54 0.7 Yes 33 84.48 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131979608 + NM_005732 RAD50 0 . . . 0.15 66.06 28 5.39 No 47 0.25 No 0 0 No -27 0.87 Yes 43 48.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68642881 + NM_133509 RAD51B 0 . . . 5.82 74.91 34 4.66 No 48 -4.72 No 0 0 No -28 0.63 No 39 41.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59840994 - NM_032043 BRIP1 0 . . . 0.23 0 21 4.69 No 45 0.22 No 0 0 No -58 0.47 No 56 58.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56807143 + NM_058216 RAD51C 0 . . . 2.81 80.18 18 4.57 No 33 1.76 Yes 0 0 No -47 0.63 No 25 47.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47661139 + NM_000251 MSH2 0 . . . 7.1 77.79 26 3.91 No -3 0.45 No 0 0 No -25 0.8 Yes 50 69.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69138362 + NM_133509 RAD51B 0 . . . 6.98 78.4 38 4.68 No 11 1.51 Yes 0 0 No -27 0.92 Yes 47 94.99 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41231371 - NM_007294 BRCA1 0 . . . 4.72 80.66 98 9.72 Yes 47 0.76 No 0 0 No -26 0.27 No 50 38.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68894258 + NM_133509 RAD51B 0 . . . 0.23 65.47 19 5 No 0 0.7 No 0 0 No -19 0.17 No 23 49.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68367300 + NM_133509 RAD51B 0 . . . 0.88 73.83 46 6.84 Yes -4 0.29 No 0 0 No -35 0.74 Yes 59 66.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69080379 + NM_133509 RAD51B 0 . . . 1.89 72.26 15 4.61 No -2 0.17 No 0 0 No -26 0.39 No 26 31.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68371781 + NM_133509 RAD51B 0 . . . 2.49 0 19 4.38 No 65 0.73 No 0 0 No -28 0.47 No 41 48.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68677290 + NM_133509 RAD51B 0 . . . 6.59 78.53 41 7.87 Yes 24 1.47 Yes 0 0 No -40 0.72 Yes 34 90.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1207392 + NM_000455 STK11 0 . . . 4.64 80.7 12 5.43 No 67 0.44 No 0 0 No -23 0.59 No 54 67.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190695104 + NM_000534 PMS1 0 . . . 4.43 82.1 29 5.56 Yes 67 0.89 Yes 0 0 No -28 0.8 Yes 49 76.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68609706 + NM_133509 RAD51B 0 . . . 0.35 76.95 13 5.58 Yes 71 -3.61 No 0 0 No -23 0.85 Yes 51 20.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23622512 - NM_024675 PALB2 0 . . . 4.15 72.85 59 7.81 Yes 66 -4.89 No 0 0 No -23 0.67 Yes 43 48.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47725947 + NM_000251 MSH2 0 . . . 10.46 90.97 37 5.79 Yes 68 0.02 No 0 0 No -36 0.83 Yes 50 87.33 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47692503 + NM_000251 MSH2 0 . . . 5.21 70.86 46 7.91 Yes 2 -1.12 No 0 0 No -36 0.37 No 34 66.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21993149 - NM_000077 CDKN2A 0 . . . 5.05 83.36 47 6.02 Yes 14 1.33 Yes 0 0 No -28 0.57 No 44 64.02 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68556695 + NM_133509 RAD51B 0 . . . 1.15 0 18 7.49 Yes 67 0.69 No 0 0 No -22 0.55 No 44 31.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68361993 + NM_133509 RAD51B 0 . . . 0.07 81.42 16 4.9 No 15 0.49 No 0 0 No -25 0.65 No 32 67.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108101394 + NM_000051 ATM 0 . . . 8.09 90.74 24 8.13 Yes 39 0.88 Yes 0 0 No -23 0.8 Yes 47 66.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215595716 - NM_000465 BARD1 0 . . . 1.46 73.13 9 4.68 No 26 0.81 Yes 0 0 No -23 0.38 No 51 54.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68893793 + NM_133509 RAD51B 0 . . . 4.53 88.96 21 4.64 No 53 1.07 Yes 0 0 No -20 0.5 No 50 54.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68529497 + NM_133509 RAD51B 0 . . . 1.27 76.63 26 4.71 No 67 -4.95 No 0 0 No -30 0.37 No 48 81.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32939277 + NM_000059 BRCA2 0 . . . 2.3 84.41 25 5.12 No 33 1.72 Yes 0 0 No -24 0.91 Yes 25 84.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68521199 + NM_133509 RAD51B 0 . . . 7.43 87.88 14 6.08 Yes 56 0.75 No 0 0 No -32 0.58 No 43 68.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68866823 + NM_004360 CDH1 0 . . . 9.35 96.79 15 5.99 Yes 12 0.17 No 0 0 No -29 0.55 No 39 48.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68350827 + NM_133509 RAD51B 0 . . . 7.15 81.17 28 5.39 No 74 -2.81 No 0 0 No -27 0.33 No 40 76.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89632013 + NM_000314 PTEN 0 . . . 2.23 68.04 40 7.76 Yes 11 0.23 No 0 0 No -39 0.78 Yes 36 71.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1216617 + NM_000455 STK11 0 . . . 1.2 83.63 31 8.12 Yes 40 0.21 No 0 0 No -30 0.7 Yes 45 57.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7585495 - NM_000546 TP53 0 . . . 5.79 81.39 16 5.74 Yes 6 1 Yes 0 0 No -26 0.46 No 52 84.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131978728 + NM_005732 RAD50 0 . . . 3.77 0 16 5.13 No 62 0.81 Yes 0 0 No -22 0.91 Yes 54 71.42 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68864067 + NM_004360 CDH1 0 . . . 2 80.34 20 4.97 No 32 0.99 Yes 0 0 No -50 0.44 No 40 71.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69123615 + NM_133509 RAD51B 0 . . . 4.81 78.41 43 5.17 No 58 0.6 No 0 0 No -28 0.59 No 53 52.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646059 + NM_133509 RAD51B 0 . . . 2.44 80.74 16 5.2 No 58 0.29 No 0 0 No -43 0.65 No 44 89.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75506962 - NM_001040108 MLH3 0 . . . 2.1 72.33 49 6.89 Yes 31 1.08 Yes 0 0 No -29 0.57 No 27 83.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69119290 + NM_133509 RAD51B 0 . . . 0.68 71.13 36 5.9 Yes 6 1.16 Yes 0 0 No -28 0.35 No 42 53.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68347846 + NM_133509 RAD51B 0 . . . 2.52 67.16 26 5.47 No 11 0.36 No 0 0 No -25 0.86 Yes 47 52.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41200266 - NM_007294 BRCA1 0 . . . 1.81 76.63 23 4.82 No 66 -5.53 No 0 0 No -22 0.73 Yes 47 31.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59849075 - NM_032043 BRIP1 0 . . . 3.15 68.34 25 5.39 No 23 1.58 Yes 0 0 No -28 0.44 No 40 75.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59857655 - NM_032043 BRIP1 0 . . . 6.04 83.56 33 5.69 Yes 30 0.39 No 18 0.72 Yes -32 0.47 No 42 65.96 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr11 108224112 + NM_000051 ATM 0 . . . 7.52 82.31 14 4.47 No 2 1.17 Yes 0 0 No -37 0.55 No 55 68.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47653873 + NM_000251 MSH2 0 . . . 2.74 73.25 34 6.32 Yes 72 -3.19 No 0 0 No -33 0.65 No 43 77.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68842063 + NM_133509 RAD51B 0 . . . 9.05 85.47 25 4.05 No 68 -1.83 No 0 0 No -24 0.82 Yes 46 79.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47680085 + NM_000251 MSH2 0 . . . 5.71 72.56 23 5.83 Yes 36 -2.5 No 0 0 No -22 0.87 Yes 40 85.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47709831 + NM_000251 MSH2 0 . . . 4.26 70.06 22 5.7 Yes 52 0.24 No 0 0 No -21 0.9 Yes 35 44.53 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68303741 + NM_133509 RAD51B 0 . . . 1.72 68.35 51 7.34 Yes 30 0.64 No 0 0 No -50 0.82 Yes 28 79.98 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68618894 + NM_133509 RAD51B 0 . . . 6.58 73.76 50 7.5 Yes 7 0.83 Yes 0 0 No -24 0.67 Yes 45 54.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68691671 + NM_133509 RAD51B 0 . . . 2.41 68.34 22 5 No 21 0.98 Yes 0 0 No -26 0.65 No 42 48.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131961904 + NM_005732 RAD50 0 . . . 2.41 65.83 20 4.99 No 0 0.13 No 0 0 No -29 0.4 No 33 60.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32902298 + NM_000059 BRCA2 0 . . . 1.82 68.21 18 4.63 No 64 -6.06 No 0 0 No -56 0.63 No 49 80.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84396734 - NM_139076 FAM175A 0 . . . 3.81 72.93 22 4.95 No 5 0.65 No 0 0 No -21 0.74 Yes 53 72.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68342435 + NM_133509 RAD51B 0 . . . 2.1 72.03 17 5.2 No 1 0.23 No 0 0 No -22 0.46 No 44 57.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47713085 + NM_000251 MSH2 0 . . . 6.74 70.28 21 5.66 Yes 40 0.91 Yes 0 0 No -25 0.43 No 39 83.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7582282 - NM_000546 TP53 0 . . . 1.43 80.22 29 5.5 No 58 -3.88 No 0 0 No -28 0.82 Yes 43 43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75482502 - NM_001040108 MLH3 0 . . . 2.38 0 17 4.58 No 66 0.65 No 0 0 No -21 0.44 No 48 47.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68289011 + NM_133509 RAD51B 0 . . . 0.34 0 26 5.59 Yes 10 1.17 Yes 0 0 No -25 0.44 No 42 97.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89653147 + NM_000314 PTEN 0 . . . 0.05 69.77 32 5.79 Yes 37 -2.22 No 0 0 No -31 0.94 Yes 50 36.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89665565 + NM_000314 PTEN 0 . . . 3.4 78.07 21 5.2 No 39 0.58 No 0 0 No -23 0.78 Yes 51 72.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48015512 + NM_000179 MSH6 0 . . . 3.33 86.9 44 6.33 Yes 3 0.66 No 0 0 No -23 0.74 Yes 44 48.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84400989 - NM_139076 FAM175A 0 . . . 2.78 69.3 20 4.1 No 45 0.62 No 0 0 No -50 0.88 Yes 44 87.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68822879 + NM_004360 CDH1 0 . . . 1.73 76.63 35 5.92 Yes 58 -3.88 No 0 0 No -34 0.32 No 48 55.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131950483 + NM_005732 RAD50 0 . . . 8.43 92.82 19 4.68 No 45 -2.94 No 0 0 No -19 0.29 No 46 47.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108204177 + NM_000051 ATM 0 . . . 9.39 95.16 16 5.11 No 31 0.81 Yes 0 0 No -41 0.64 No 45 78.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59939682 - NM_032043 BRIP1 0 . . . 3.36 71.71 44 6.82 Yes -3 0.19 No 0 0 No -27 0.59 No 50 70.03 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68784065 + NM_133509 RAD51B 0 . . . 0.85 0 23 5.2 No 20 0.28 No 0 0 No -22 0.46 No 38 86.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59843781 - NM_032043 BRIP1 0 . . . 5.63 92.21 46 7.08 Yes 58 0.72 No 0 0 No -29 0.6 No 49 62.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68880558 + NM_133509 RAD51B 0 . . . 1.13 61.55 35 6.7 Yes 37 0.37 No 0 0 No -26 0.67 Yes 48 61.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68937488 + NM_133509 RAD51B 0 . . . 0.99 69.85 18 4.33 No 41 0.65 No 0 0 No -33 0.35 No 44 67.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68695785 + NM_133509 RAD51B 0 . . . 0.67 73 22 4.69 No 74 1.07 Yes 0 0 No -55 0.68 Yes 13 68.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108176675 + NM_000051 ATM 0 . . . 3.82 78.03 51 6.14 Yes 67 1.49 Yes 0 0 No -25 0.73 Yes 43 37.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68801985 + NM_133509 RAD51B 0 . . . 0.09 76.63 42 6.63 Yes 58 -3.81 No 0 0 No -41 0.58 No 43 71.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68891847 + NM_133509 RAD51B 0 . . . 3.82 78.93 32 6.16 Yes 70 -1.57 No 0 0 No -31 0.94 Yes 53 31.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56769056 + NM_058216 RAD51C 0 . . . 2.09 63.17 24 6.32 Yes 29 0.32 No 0 0 No -23 0.61 No 41 45.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68348634 + NM_133509 RAD51B 0 . . . 2.16 63.14 32 7.61 Yes 73 0.33 No 0 0 No -25 0.45 No 42 70.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89660021 + NM_000314 PTEN 0 . . . 5.05 84.53 130 11.34 Yes -1 0.28 No 0 0 No -55 0.58 No 40 89.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59930288 - NM_032043 BRIP1 0 . . . 0.39 70.74 25 4.15 No 4 1.25 Yes 0 0 No -29 0.63 No 54 78.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94218982 - NM_005591 MRE11 0 . . . 0.37 0 20 7.14 Yes 67 0.33 No 0 0 No -19 0.63 No 31 43.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37092012 + NM_000249 MLH1 0 . . . 0.17 60.95 15 5.17 No 37 1.44 Yes 0 0 No -26 0.85 Yes 11 70.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68527447 + NM_133509 RAD51B 0 . . . 1.07 66.68 24 6.4 Yes -3 0.83 Yes 0 0 No -23 0.57 No 45 54.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56779050 + NM_058216 RAD51C 0 . . . 0.11 81.86 28 5.3 No 33 0.65 No 0 0 No -27 0.89 Yes 25 49.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68717003 + NM_133509 RAD51B 0 . . . 6.42 79.87 27 5.74 Yes 45 1.56 Yes 0 0 No -24 0.21 No 45 89.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68596166 + NM_133509 RAD51B 0 . . . 3.5 67.61 18 6.23 Yes 75 0.25 No 0 0 No -22 0.63 No 45 52.19 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108172698 + NM_000051 ATM 0 . . . 5.87 80.27 23 4.61 No 68 1.67 Yes 0 0 No -22 0.51 No 37 57.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68464304 + NM_133509 RAD51B 0 . . . 2.51 62.47 22 5 No 37 0.93 Yes 0 0 No -21 0.83 Yes 42 48.17 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1220906 + NM_000455 STK11 0 . . . 0.76 65.52 40 6.71 Yes 0 0.11 No 0 0 No -30 0.83 Yes 39 70.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94193885 - NM_005591 MRE11 0 . . . 3.14 74.47 31 5.28 No 67 0.33 No 0 0 No -30 0.56 No 48 64.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215660318 - NM_000465 BARD1 0 . . . 6.42 76.34 22 5.06 No 56 0.87 Yes 0 0 No -21 0.46 No 37 75.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23620745 - NM_024675 PALB2 0 . . . 9.95 86.94 41 5.59 Yes 6 0.86 Yes 0 0 No -26 0.64 No 45 53.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90969246 - NM_002485 NBN 0 . . . 1.6 72.56 65 7.18 Yes 15 1.1 Yes 0 0 No -23 0.33 No 43 63.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68406156 + NM_133509 RAD51B 0 . . . 4.94 80.06 29 5.66 Yes 0 0.62 No 0 0 No -28 0.46 No 45 58.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152355182 - NM_005431 XRCC2 0 . . . 0.41 74.68 33 6.7 Yes 11 0.74 No 0 0 No -32 0.79 Yes 47 90.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108175262 + NM_000051 ATM 0 . . . 5.11 91.24 20 5.1 No 18 1.21 Yes 0 0 No -23 0.56 No 40 93.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68333961 + NM_133509 RAD51B 0 . . . 4.67 80.9 9 3.35 No 9 1.39 Yes 0 0 No -31 0.29 No 48 60.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94188315 - NM_005591 MRE11 0 . . . 7.48 67.15 35 6 Yes 37 1.36 Yes 0 0 No -22 0.57 No 42 59.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90970042 - NM_002485 NBN 0 . . . 3.16 68.75 21 5.1 No 74 -1.02 No 0 0 No -19 0.23 No 47 25.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68625927 + NM_133509 RAD51B 0 . . . 6.1 78.95 42 6.64 Yes 6 1.01 Yes 0 0 No -22 0.36 No 43 71.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69032563 + NM_133509 RAD51B 0 . . . 1 0 20 4.99 No 8 1.6 Yes 0 0 No -25 0.38 No 50 92.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47667220 + NM_000251 MSH2 0 . . . 3.29 74.43 40 6.99 Yes 23 1.02 Yes 0 0 No -25 0.71 Yes 49 42.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108116653 + NM_000051 ATM 0 . . . 2.81 68.95 19 4.67 No 59 1.45 Yes 0 0 No -22 0.45 No 42 91.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68355403 + NM_133509 RAD51B 0 . . . 6.05 74.78 24 5.11 No 27 0.58 No 0 0 No -23 0.93 Yes 40 70.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68349556 + NM_133509 RAD51B 0 . . . 6.52 82.91 18 4.43 No 51 1.5 Yes 0 0 No -17 0.74 Yes 49 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32901950 + NM_000059 BRCA2 0 . . . 4.98 90.11 21 4.35 No 37 1.31 Yes 0 0 No -23 0.31 No 44 62.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108239351 + NM_000051 ATM 0 . . . 1.6 70.95 18 4.69 No 61 -5.45 No 0 0 No -23 0.62 No 43 58.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68829058 + NM_004360 CDH1 0 . . . 0.66 66.22 25 6.06 Yes 58 0.95 Yes 0 0 No -24 0.72 Yes 47 43.6 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68546529 + NM_133509 RAD51B 0 . . . 0.11 0 32 6.48 Yes 20 1.16 Yes 0 0 No -31 0.41 No 38 74.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108233922 + NM_000051 ATM 0 . . . 3.66 78.1 20 6.36 Yes 47 0.7 No 0 0 No -27 0.53 No 49 83.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37090856 + NM_000249 MLH1 0 . . . 1.01 0 23 6.19 Yes 0 1.01 Yes 0 0 No -22 0.67 Yes 58 53.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68434693 + NM_133509 RAD51B 0 . . . 5.99 76.96 28 5.48 No 29 0.1 No 0 0 No -27 0.88 Yes 45 87.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68790877 + NM_004360 CDH1 0 . . . 1.87 76.63 23 5.1 No 70 -4.94 No 0 0 No -25 0.45 No 38 77.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68690896 + NM_133509 RAD51B 0 . . . 5.68 84.36 16 4.69 No 30 1.03 Yes 0 0 No -49 0.38 No 28 52.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89662618 + NM_000314 PTEN 0 . . . 3.56 87.09 14 7.45 Yes 38 1.55 Yes 0 0 No -54 0.74 Yes 51 57.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68594047 + NM_133509 RAD51B 0 . . . 1.9 71.33 35 5.83 Yes 26 1.18 Yes 0 0 No -27 0.56 No 49 47.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108186969 + NM_000051 ATM 0 . . . 0.64 83.97 25 4.9 No 70 0.7 No 0 0 No -22 0.61 No 43 49.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108163971 + NM_000051 ATM 0 . . . 5.13 83.11 20 5.1 No 11 0.46 No 0 0 No -27 0.76 Yes 47 91.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47794180 + NM_000251 MSH2 0 . . . 4.76 77.72 28 5.73 Yes 11 0.69 No 0 0 No -20 0.58 No 47 71.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89654610 + NM_000314 PTEN 0 . . . 2.23 71.64 19 4.47 No 54 0.78 Yes 0 0 No -18 0.5 No 52 38.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104164236 - NM_001100119 XRCC3 0 . . . 0.64 0 15 4.58 No 43 -2.89 No 0 0 No -44 0.7 Yes 56 23.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68540305 + NM_133509 RAD51B 0 . . . 3.67 75.77 15 5.28 No 66 1.5 Yes 0 0 No -45 0.27 No 42 69.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48031255 + NM_000179 MSH6 0 . . . 4.79 73.97 37 7.35 Yes 3 0.1 No 0 0 No -32 0.65 No 47 63.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68576005 + NM_133509 RAD51B 0 . . . 4.69 82.5 30 4.94 No 7 0.76 No 0 0 No -25 0.48 No 51 60.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68767003 + NM_133509 RAD51B 0 . . . 5.44 74.41 49 7.07 Yes 9 1.59 Yes 0 0 No -28 0.7 Yes 49 93.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68703640 + NM_133509 RAD51B 0 . . . 3.84 70.84 16 4.72 No 71 1.16 Yes 0 0 No -22 0.72 Yes 56 50.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84392910 - NM_139076 FAM175A 0 . . . 1.66 0 13 5.1 No 20 0.06 No 0 0 No -12 0.4 No 18 50.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215596109 - NM_000465 BARD1 0 . . . 2.5 73.28 31 4.32 No 74 -2.38 No 0 0 No -23 0.55 No 50 75.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68885508 + NM_133509 RAD51B 0 . . . 0.39 0 33 6.16 Yes 47 0.23 No 0 0 No -32 0.65 No 45 89.54 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47668879 + NM_000251 MSH2 0 . . . 3.97 84.41 39 6.1 Yes 21 1.55 Yes 0 0 No -13 0.59 No 47 64.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68847891 + NM_004360 CDH1 0 . . . 0.38 67.3 21 5.2 No 4 0.4 No 0 0 No -20 0.38 No 54 85.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69123114 + NM_133509 RAD51B 0 . . . 2.84 74.62 19 5.48 No 43 -2.38 No 0 0 No -23 0.56 No 48 62.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59812026 - NM_032043 BRIP1 0 . . . 7.14 78.42 20 4.79 No 8 0.88 Yes 0 0 No -24 0.43 No 50 64.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190713423 + NM_000534 PMS1 0 . . . 2.92 71.68 50 6.88 Yes 13 1.18 Yes 0 0 No -26 0.66 No 45 79.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59836572 - NM_032043 BRIP1 0 . . . 5.66 83.97 15 3.53 No 48 1.47 Yes 0 0 No -38 0.85 Yes 54 43.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32929716 + NM_000059 BRCA2 0 . . . 3.66 62.52 12 3.98 No 17 1.18 Yes 0 0 No -21 0.73 Yes 29 43.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68955789 + NM_133509 RAD51B 0 . . . 0.78 84.22 17 4.58 No 33 1.03 Yes 0 0 No -17 0.73 Yes 25 37.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68389402 + NM_133509 RAD51B 0 . . . 2.91 64.74 29 5.66 Yes 40 0.06 No 0 0 No -28 0.62 No 45 63.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37066029 + NM_000249 MLH1 0 . . . 4.91 76.03 17 5.29 No 53 1.26 Yes 0 0 No -21 0.72 Yes 46 63.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68423300 + NM_133509 RAD51B 0 . . . 1.51 75.66 29 6.31 Yes 73 -1.61 No 0 0 No -28 0.91 Yes 44 68.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68634759 + NM_133509 RAD51B 0 . . . 0.18 70.66 14 5.19 No 45 1.51 Yes 0 0 No -20 0.65 No 48 78.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41249422 - NM_007294 BRCA1 0 . . . 0.43 77.96 55 7.8 Yes 39 1.28 Yes 0 0 No -54 0.27 No 47 54.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89653055 + NM_000314 PTEN 0 . . . 4.74 78.42 35 6.16 Yes 8 1.52 Yes 0 0 No -34 0.94 Yes 32 67.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37076245 + NM_000249 MLH1 0 . . . 1.87 82.8 42 5.22 No 26 -1.63 No 0 0 No -29 0.88 Yes 48 77.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75516228 - NM_001040108 MLH3 0 . . . 3.45 80.89 33 6.01 Yes 26 -1.68 No 0 0 No -32 0.75 Yes 48 71.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89688548 + NM_000314 PTEN 0 . . . 3.36 75.95 15 4.99 No 8 1.09 Yes 0 0 No -19 0.36 No 50 81.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47630749 + NM_000251 MSH2 0 . . . 6.19 82.72 25 5.01 No 6 1.26 Yes 0 0 No -24 0.57 No 45 92.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41234739 - NM_007294 BRCA1 0 . . . 0.53 56.79 59 7.19 Yes 33 -3.79 No 0 0 No -20 0.51 No 41 41.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68476652 + NM_133509 RAD51B 0 . . . 8.33 89.25 56 7.52 Yes 3 1.44 Yes 0 0 No -26 0.6 No 47 68.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104167145 - NM_001100119 XRCC3 0 . . . 5.17 80.71 32 6.16 Yes 7 0.99 Yes 0 0 No -31 0.94 Yes 47 64.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6037135 - NM_000535 PMS2 0 . . . 4.14 66.12 33 5.94 Yes 16 0.45 No 0 0 No -32 0.63 No 42 31.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104170432 - NM_001100119 XRCC3 0 . . . 2.68 71.14 18 3.87 No 12 -1.73 No 0 0 No -25 0.47 No 47 71.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89700090 + NM_000314 PTEN 0 . . . 0.42 0 22 6.25 Yes 29 -3.83 No 0 0 No -24 0.34 No 52 37.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47727772 + NM_000251 MSH2 0 . . . 0.24 0 16 5.23 No 62 -2.57 No 0 0 No -21 0.63 No 38 47.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29082866 - NM_001005735 CHEK2 0 . . . 3.81 78.31 9 5.83 Yes 63 0.72 No 0 0 No -29 0.23 No 43 79.7 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89722596 + NM_000314 PTEN 0 . . . 8.4 87.67 27 6.16 Yes 75 0.59 No 0 0 No -26 0.94 Yes 39 48.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131970459 + NM_005732 RAD50 0 . . . 3.24 72.92 15 4.58 No 21 0.43 No 0 0 No -47 0.58 No 44 70.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68435253 + NM_133509 RAD51B 0 . . . 3.72 76.1 26 5.91 Yes 4 1.06 Yes 0 0 No -25 0.86 Yes 41 67 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131926659 + NM_005732 RAD50 0 . . . 8.3 86.23 24 5.38 No 25 1.57 Yes 0 0 No -23 0.6 No 45 96.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59906844 - NM_032043 BRIP1 0 . . . 1.89 61.59 16 4.64 No 40 1.18 Yes 0 0 No -49 0.34 No 18 80.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68865328 + NM_133509 RAD51B 0 . . . 7.41 78.18 33 5.17 No 74 1.32 Yes 0 0 No -19 0.42 No 44 51.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41274194 - NM_007294 BRCA1 0 . . . 3.5 78.2 26 5.95 Yes 30 0.55 No 0 0 No -22 0.5 No 44 84.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68555024 + NM_133509 RAD51B 0 . . . 1.51 0 27 4.97 No 61 0.99 Yes 0 0 No -24 0.51 No 51 28.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68583458 + NM_133509 RAD51B 0 . . . 4.91 72.47 21 5 No 11 0.33 No 0 0 No -20 0.71 Yes 47 52.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69059538 + NM_133509 RAD51B 0 . . . 3.27 73.95 21 4.08 No 69 0.17 No 0 0 No -20 0.92 Yes 37 82.73 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59848000 - NM_032043 BRIP1 0 . . . 3 74.81 51 7.55 Yes 30 1.1 Yes 0 0 No -26 0.74 Yes 22 37.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108122357 + NM_000051 ATM 0 . . . 4.56 72.88 19 5.83 Yes 28 0.09 No 0 0 No -24 0.55 No 40 31.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68679919 + NM_133509 RAD51B 0 . . . 1.22 60.22 27 5.74 Yes 73 0.68 No 0 0 No -26 0.82 Yes 53 78.35 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90985990 - NM_002485 NBN 0 . . . 8.36 88.16 20 5.1 No 12 1.78 Yes 0 0 No -39 0.36 No 46 96.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68733839 + NM_133509 RAD51B 0 . . . 7.88 84.22 21 4.54 No 7 1.12 Yes 0 0 No -20 0.5 No 51 55.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89629164 + NM_000314 PTEN 0 . . . 2.89 84.24 23 4.69 No 31 -2.09 No 0 0 No -22 0.67 Yes 51 63.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59797680 - NM_032043 BRIP1 0 . . . 0.42 0 23 4.07 No 25 0.95 Yes 0 0 No -23 0.56 No 33 54.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32911430 + NM_000059 BRCA2 0 . . . 2.12 74.07 17 5.29 No 37 -2.33 No 0 0 No -22 0.65 No 44 56.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37037637 + NM_000249 MLH1 0 . . . 3.21 78.03 21 5 No 73 0.8 Yes 0 0 No -20 0.69 Yes 55 67.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32907782 + NM_000059 BRCA2 0 . . . 2.86 74.75 17 4.6 No 15 -2.99 No 0 0 No -24 0.82 Yes 43 56.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47711694 + NM_000251 MSH2 0 . . . 1.63 62.89 21 6.06 Yes -2 0.23 No 0 0 No -30 0.44 No 48 60.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89673994 + NM_000314 PTEN 0 . . . 7.35 79.93 31 7 Yes 22 0.81 Yes 0 0 No -27 0.67 Yes 50 51.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68412369 + NM_133509 RAD51B 0 . . . 3.6 85.02 31 10.57 Yes 4 1.05 Yes 0 0 No -30 0.87 Yes 54 71.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131952824 + NM_005732 RAD50 0 . . . 4.02 68.75 15 5.39 No -3 0.68 No 0 0 No -14 0.37 No 55 33.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7591395 - NM_000546 TP53 0 . . . 3.3 80.43 21 4.9 No 1 0.81 Yes 0 0 No -28 0.42 No 43 82.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59858818 - NM_032043 BRIP1 0 . . . 3.39 72.66 18 5.39 No 18 0.82 Yes 0 0 No -17 0.5 No 51 81.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68694133 + NM_133509 RAD51B 0 . . . 5.87 70.31 40 6.71 Yes 24 0.35 No 0 0 No -23 0.57 No 33 41.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59899559 - NM_032043 BRIP1 0 . . . 3.89 70.09 18 4.19 No 75 0.42 No 0 0 No -29 0.83 Yes 49 40.33 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59866911 - NM_032043 BRIP1 0 . . . 3.21 70.38 19 3.84 No 33 0.81 Yes 0 0 No -22 0.25 No 40 84.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68816762 + NM_133509 RAD51B 0 . . . 4.21 79.71 12 4.24 No 69 -2.61 No 0 0 No -26 0.76 Yes 44 42.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94149100 - NM_005591 MRE11 0 . . . 2.62 79.84 14 5.1 No 44 -3.11 No 0 0 No -28 0.29 No 55 35.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68677875 + NM_133509 RAD51B 0 . . . 6 74.88 43 6.04 Yes 66 0.94 Yes 0 0 No -23 0.35 No 46 54.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47705648 + NM_000251 MSH2 0 . . . 7.06 87.41 24 5.7 Yes 3 0.82 Yes 0 0 No -23 0.57 No 44 68.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41014906 + NM_001164269 RAD51 0 . . . 2.16 78.73 18 6.05 Yes 51 -3.85 No 0 0 No -33 0.38 No 31 52.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68872315 + NM_133509 RAD51B 0 . . . 1.77 85.4 21 4.32 No 67 0.61 No 0 0 No -18 0.52 No 50 79.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68299489 + NM_133509 RAD51B 0 . . . 5.95 69.39 51 7.73 Yes 11 1.43 Yes 0 0 No -43 0.3 No 47 78.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90966683 - NM_002485 NBN 0 . . . 7.95 86.42 19 4.54 No 38 1.34 Yes 0 0 No -19 0.49 No 46 82.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94193142 - NM_005591 MRE11 0 . . . 2.25 60.3 23 6.17 Yes 24 -2.93 No 0 0 No -22 0.83 Yes 49 58.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131924149 + NM_005732 RAD50 0 . . . 2.28 76.55 17 4.12 No 75 -5.57 No 0 0 No -28 0.85 Yes 45 67.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89727831 + NM_000314 PTEN 0 . . . 1.04 67.7 16 4.46 No 30 0.36 No 0 0 No -16 0.32 No 48 82.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68407474 + NM_133509 RAD51B 0 . . . 6.29 74.55 20 6.48 Yes 54 0.96 Yes 0 0 No -27 0.62 No 46 75.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32963195 + NM_000059 BRCA2 0 . . . 2.66 0 16 4.69 No 75 0.69 No 0 0 No -37 0.94 Yes 43 74.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68394408 + NM_133509 RAD51B 0 . . . 4.32 65.25 24 5.48 No 51 0.93 Yes 0 0 No -23 0.78 Yes 38 64.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48014476 + NM_000179 MSH6 0 . . . 8.31 79.81 10 4.98 No 2 0.15 No 0 0 No -20 0.65 No 47 51.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68406972 + NM_133509 RAD51B 0 . . . 3.6 85.02 22 5.72 Yes 4 1.2 Yes 0 0 No -21 0.71 Yes 45 80.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89649817 + NM_000314 PTEN 0 . . . 9.21 85.05 19 6 Yes 64 -1.46 No 0 0 No -31 0.45 No 42 59.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68808920 + NM_133509 RAD51B 0 . . . 0.58 0 30 5.66 Yes 3 -2.12 No 0 0 No -29 0.95 Yes 30 44.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29132367 - NM_001005735 CHEK2 0 . . . 7.8 84.06 33 5.79 Yes 13 0.31 No 0 0 No -35 0.9 Yes 45 56.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6014198 - NM_000535 PMS2 0 . . . 7.22 79.38 26 5.08 No 36 0.65 No 0 0 No -25 0.66 No 50 79.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21989955 - NM_000077 CDKN2A 0 . . . 8.7 77.28 26 5.78 Yes 13 1.93 Yes 25 0.88 Yes -25 0.87 Yes 45 91.52 Yes BPP: Yes, SVM: Yes, Branch: Yes, LB: Yes, RNABPS: Yes chr8 90964552 - NM_002485 NBN 0 . . . 3.72 73.32 16 4.74 No 47 1.02 Yes 0 0 No -20 0.74 Yes 44 51.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108097370 + NM_000051 ATM 0 . . . 3.36 81.96 68 4.96 No 4 1.5 Yes 0 0 No -27 0.66 No 44 66.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68737840 + NM_133509 RAD51B 0 . . . 5.25 81.17 44 6.56 Yes 9 1.07 Yes 0 0 No -30 0.67 Yes 49 89.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37081067 + NM_000249 MLH1 0 . . . 0.39 58.79 25 5.52 No 24 0.08 No 0 0 No -21 0.56 No 23 58.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41019608 + NM_001164269 RAD51 0 . . . 5.5 71.29 24 4.57 No 16 1.18 Yes 0 0 No -23 0.37 No 42 93.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68995496 + NM_133509 RAD51B 0 . . . 4.25 70.48 29 5.64 Yes 1 0.45 No 0 0 No -28 0.89 Yes 35 65.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90967015 - NM_002485 NBN 0 . . . 5.23 66.62 22 5.82 Yes 43 1.9 Yes 0 0 No -21 0.8 Yes 32 72.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41259997 - NM_007294 BRCA1 0 . . . 4.05 73.32 40 8.99 Yes 65 1.67 Yes 0 0 No -27 0.51 No 43 69.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68828212 + NM_133509 RAD51B 0 . . . 7.99 79.8 25 4.54 No 2 0.76 No 0 0 No -25 0.65 No 41 85.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215626755 - NM_000465 BARD1 0 . . . 2.78 78.63 64 8.78 Yes 20 0.09 No 0 0 No -29 0.85 Yes 38 51.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215591054 - NM_000465 BARD1 0 . . . 5.31 75.11 10 4 No 53 1.54 Yes 0 0 No -19 0.31 No 38 61.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89700760 + NM_000314 PTEN 0 . . . 0.8 65.17 18 6.7 Yes 65 0.72 No 0 0 No -29 0.52 No 49 47.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21994592 - NM_000077 CDKN2A 0 . . . 3.25 70.97 37 6.33 Yes 29 0.53 No 0 0 No -36 0.84 Yes 29 57.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94186702 - NM_005591 MRE11 0 . . . 0.36 62.69 20 5.06 No 57 -5.12 No 0 0 No -22 0.48 No 45 19.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47717029 + NM_000251 MSH2 0 . . . 9.43 72.9 24 6.21 Yes 67 2.07 Yes 0 0 No -23 0.56 No 36 57.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47795843 + NM_000251 MSH2 0 . . . 1.3 72.59 29 5.65 Yes 34 0.11 No 0 0 No -48 0.37 No 46 66.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47790827 + NM_000251 MSH2 0 . . . 4.1 76.6 13 5.29 No 66 -3.39 No 0 0 No -30 0.64 No 49 79.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37064311 + NM_000249 MLH1 0 . . . 1.37 76.89 24 7.98 Yes 36 0.93 Yes 0 0 No -23 0.58 No 50 55.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108240462 + NM_000051 ATM 0 . . . 0.71 61.98 19 5 No 39 -2.03 No 0 0 No -18 0.36 No 35 51.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89650350 + NM_000314 PTEN 0 . . . 5.63 79.41 24 5.08 No 47 0.91 Yes 0 0 No -27 0.83 Yes 48 43.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59837666 - NM_032043 BRIP1 0 . . . 7.59 83.91 31 5.83 Yes 52 1.07 Yes 0 0 No -30 0.38 No 50 79.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68803533 + NM_133509 RAD51B 0 . . . 0.1 83.18 36 6.31 Yes 58 -3.29 No 0 0 No -23 0.63 No 47 39.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152369125 - NM_005431 XRCC2 0 . . . 8.43 85.16 36 5.09 No 32 1.41 Yes 0 0 No -23 0.61 No 47 50.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59941489 - NM_032043 BRIP1 0 . . . 1.01 69.04 32 4.37 No 46 0.61 No 0 0 No -31 0.85 Yes 44 73.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29113265 - NM_001005735 CHEK2 0 . . . 1.05 84.87 25 5.2 No 33 1.2 Yes 0 0 No -51 0.92 Yes 25 48.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6029771 - NM_000535 PMS2 0 . . . 1.8 67.3 33 4.05 No 52 0.85 Yes 0 0 No -27 0.26 No 38 52.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94165081 - NM_005591 MRE11 0 . . . 3.43 70 13 4.8 No 10 1.19 Yes 0 0 No -21 0.42 No 42 63.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94166845 - NM_005591 MRE11 0 . . . 1.46 75 26 5.88 Yes -3 0.32 No 0 0 No -29 0.24 No 48 74.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68686591 + NM_133509 RAD51B 0 . . . 1.8 74.41 21 4.94 No 64 -5.37 No 0 0 No -20 0.81 Yes 55 45.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190726182 + NM_000534 PMS1 0 . . . 1.65 64.02 34 7.66 Yes 63 0.21 No 0 0 No -33 0.7 Yes 37 48.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr19 1213445 + NM_000455 STK11 0 . . . 10.26 82.61 21 7.21 Yes 8 0.85 Yes 0 0 No -20 0.71 Yes 47 69.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75500751 - NM_001040108 MLH3 0 . . . 0.52 68.06 20 5.1 No 52 0.03 No 0 0 No -22 0.84 Yes 48 81.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89674749 + NM_000314 PTEN 0 . . . 8.56 81.76 90 8.73 Yes 15 1.11 Yes 0 0 No -24 0.39 No 43 92.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29112762 - NM_001005735 CHEK2 0 . . . 4.45 77.71 21 3.75 No 75 -1.55 No 0 0 No -20 0.49 No 46 64.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48021913 + NM_000179 MSH6 0 . . . 1.2 71.05 13 4.9 No 46 0.89 Yes 0 0 No -36 0.34 No 44 33.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68852889 + NM_004360 CDH1 0 . . . 2.93 70.42 24 4.9 No 45 1.13 Yes 0 0 No -23 0.97 Yes 39 49.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6022790 - NM_000535 PMS2 0 . . . 4.93 72.85 30 5.74 Yes 67 -4.97 No 0 0 No -27 0.29 No 43 45.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68422296 + NM_133509 RAD51B 0 . . . 1.55 62.85 51 5.65 Yes 75 2.22 Yes 0 0 No -28 0.82 Yes 42 28.56 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68797577 + NM_004360 CDH1 0 . . . 0.73 76.58 10 5.57 Yes 57 0.15 No 0 0 No -24 0.54 No 50 40.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33435163 - NM_002878 RAD51D 0 . . . 1.08 84.22 28 5.39 No 27 1.8 Yes 0 0 No -27 0.92 Yes 25 50.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32917551 + NM_000059 BRCA2 0 . . . 2.4 80.95 38 6.02 Yes 73 0.9 Yes 0 0 No -37 0.45 No 33 62.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68713625 + NM_133509 RAD51B 0 . . . 1.6 79.36 20 5.61 Yes 11 -2.38 No 0 0 No -28 0.78 Yes 47 71.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23613936 - NM_024675 PALB2 0 . . . 3.94 70.85 24 6.08 Yes 23 1.59 Yes 0 0 No -23 0.69 Yes 45 77.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215621768 - NM_000465 BARD1 0 . . . 2.76 78.19 30 6.62 Yes 47 -3.72 No 0 0 No -25 0.82 Yes 60 35.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69046185 + NM_133509 RAD51B 0 . . . 0.68 0 10 5.1 No 44 1.15 Yes 0 0 No -28 0.77 Yes 43 45.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131962608 + NM_005732 RAD50 0 . . . 3.82 80.14 30 4.64 No 2 1.54 Yes 0 0 No -22 0.75 Yes 56 57.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59835328 - NM_032043 BRIP1 0 . . . 5.47 87.29 14 5.65 Yes 57 1.18 Yes 0 0 No -47 0.66 No 46 27.94 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68430935 + NM_133509 RAD51B 0 . . . 2.52 69.91 28 4.87 No 76 -4.76 No 0 0 No -27 0.47 No 39 66.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47668737 + NM_000251 MSH2 0 . . . 3.68 70.85 24 4.83 No 18 0.87 Yes 0 0 No -23 0.61 No 40 50.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68851608 + NM_004360 CDH1 0 . . . 0.23 73.6 34 5.92 Yes 51 0.8 Yes 0 0 No -33 0.53 No 41 25.28 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32926830 + NM_000059 BRCA2 0 . . . 2.15 70.71 16 4.69 No 29 -2.85 No 0 0 No -15 0.59 No 42 61.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40995274 + NM_001164269 RAD51 0 . . . 1.97 66.36 24 4.29 No 53 1.66 Yes 0 0 No -23 0.87 Yes 51 69.81 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94214257 - NM_005591 MRE11 0 . . . 5.92 82.31 26 5.94 Yes 58 1.16 Yes 0 0 No -30 0.72 Yes 49 93.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190727849 + NM_000534 PMS1 0 . . . 6.24 82.01 21 4.79 No 55 0.5 No 0 0 No -20 0.8 Yes 37 76.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215676195 - NM_000465 BARD1 0 . . . 4.87 79.58 19 5.63 Yes 3 1.77 Yes 0 0 No -18 0.35 No 55 51.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68287136 + NM_133509 RAD51B 0 . . . 7.87 82.09 27 6.7 Yes 5 0.93 Yes 0 0 No -26 0.9 Yes 48 51.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68988343 + NM_133509 RAD51B 0 . . . 4.9 80.4 27 5.74 Yes 59 0.91 Yes 0 0 No -26 0.74 Yes 46 80.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48008836 + NM_000179 MSH6 0 . . . 1.62 73.32 41 4.77 No 30 1.19 Yes 0 0 No -45 0.65 No 28 73.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7565466 - NM_000546 TP53 0 . . . 3.39 65.89 16 4.63 No 31 -2.3 No 0 0 No -27 0.47 No 42 60.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41238313 - NM_007294 BRCA1 0 . . . 5.18 80.35 13 5.29 No 7 1.22 Yes 0 0 No -24 0.64 No 51 56.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68546571 + NM_133509 RAD51B 0 . . . 8.09 87.25 18 4.9 No 62 1.15 Yes 0 0 No -24 0.47 No 32 77.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89712795 + NM_000314 PTEN 0 . . . 7.23 77.4 18 4.9 No 20 1.61 Yes 0 0 No -17 0.39 No 38 75.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47665346 + NM_000251 MSH2 0 . . . 2.16 77.76 26 5.46 No -2 0.46 No 0 0 No -44 0.62 No 45 50.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68748329 + NM_133509 RAD51B 0 . . . 1 74.26 36 5.89 Yes 61 1.32 Yes 0 0 No -28 0.53 No 47 42.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47677300 + NM_000251 MSH2 0 . . . 2.73 0 33 6.82 Yes 14 1.03 Yes 0 0 No -27 0.6 No 33 55.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47709122 + NM_000251 MSH2 0 . . . 7.44 84.21 12 5.78 Yes 55 0.78 Yes 0 0 No -24 0.59 No 50 56.64 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68480488 + NM_133509 RAD51B 0 . . . 3.59 64.5 42 7.39 Yes 33 0.28 No 0 0 No -30 0.77 Yes 39 42.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89670175 + NM_000314 PTEN 0 . . . 2.16 64.01 15 4.52 No 36 1.36 Yes 0 0 No -51 0.79 Yes 42 82.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108092100 + NM_000051 ATM 0 . . . 0.38 56.28 41 5.64 Yes 69 -5.15 No 0 0 No -27 0.72 Yes 50 32.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190692670 + NM_000534 PMS1 0 . . . 0.78 82.92 66 7.43 Yes 22 0.19 No 0 0 No -29 0.5 No 35 65.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108169978 + NM_000051 ATM 0 . . . 5.39 70.23 19 4.4 No 3 0.79 Yes 0 0 No -18 0.54 No 51 66.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84384485 - NM_139076 FAM175A 0 . . . 1.08 84.22 17 5.29 No 33 0.47 No 0 0 No -21 0.52 No 51 44.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190682079 + NM_000534 PMS1 0 . . . 8.12 88.52 21 5.38 No 19 0.75 No 0 0 No -45 0.33 No 42 61.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68478028 + NM_133509 RAD51B 0 . . . 2.03 68.59 34 6.16 Yes 24 0.86 Yes 0 0 No -33 0.7 Yes 34 97.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23619262 - NM_024675 PALB2 0 . . . 3.79 78.89 34 6 Yes 39 1 Yes 0 0 No -29 0.43 No 44 35.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68800849 + NM_133509 RAD51B 0 . . . 2.93 65.25 19 6.16 Yes 10 0.85 Yes 0 0 No -33 0.61 No 48 63.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131938283 + NM_005732 RAD50 0 . . . 4.23 61.44 20 7.83 Yes 52 0.44 No 0 0 No -25 0.4 No 41 62.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41252496 - NM_007294 BRCA1 0 . . . 3.32 67.36 21 4.48 No 16 -2.18 No 0 0 No -20 0.42 No 42 38.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69112259 + NM_133509 RAD51B 0 . . . 2.1 73.73 41 6.93 Yes 34 -3.67 No 0 0 No -34 0.59 No 20 28.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89634492 + NM_000314 PTEN 0 . . . 6.07 81.01 16 5.01 No 1 0.75 No 0 0 No -23 0.43 No 48 52.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68535307 + NM_133509 RAD51B 0 . . . 2.96 75.22 24 5.38 No 15 0.41 No 0 0 No -22 0.67 Yes 43 57.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108202906 + NM_000051 ATM 0 . . . 0.09 74.68 32 3.88 No 4 0.41 No 0 0 No -24 0.54 No 54 57.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104175938 - NM_001100119 XRCC3 0 . . . 1.03 71.52 49 7.26 Yes 58 -1.17 No 0 0 No -19 0.51 No 38 26.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68661578 + NM_133509 RAD51B 0 . . . 1.87 76.24 39 7.81 Yes 38 0.37 No 0 0 No -38 0.87 Yes 42 55.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29113814 - NM_001005735 CHEK2 0 . . . 2.92 74.02 15 5.31 No 70 -0.35 No 0 0 No -31 0.37 No 44 36.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23627766 - NM_024675 PALB2 0 . . . 4.27 70.45 20 5.1 No 69 -5.92 No 0 0 No -59 0.26 No 42 71.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68585934 + NM_133509 RAD51B 0 . . . 9.01 84.18 19 7.07 Yes 9 1.14 Yes 0 0 No -18 0.56 No 44 92.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68317610 + NM_133509 RAD51B 0 . . . 1.77 69.98 31 5.41 No 24 0.8 Yes 0 0 No -23 0.6 No 57 51.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94190559 - NM_005591 MRE11 0 . . . 10.78 83.86 22 3.36 No 51 -0.7 No 0 0 No -21 0.96 Yes 43 85.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29117321 - NM_001005735 CHEK2 0 . . . 2.6 72.85 19 3.34 No 67 -4.76 No 0 0 No -24 0.62 No 43 44.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89623346 + NM_000314 PTEN 0 . . . 5.2 74.29 15 5.01 No 19 0.75 No 0 0 No -33 0.57 No 39 34.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215611645 - NM_000465 BARD1 0 . . . 8.99 81.67 22 7.23 Yes 71 0.35 No 0 0 No -21 0.77 Yes 47 85.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89715486 + NM_000314 PTEN 0 . . . 3.76 67.53 20 5.42 No 73 1.02 Yes 0 0 No -31 0.76 Yes 37 56.71 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68560394 + NM_133509 RAD51B 0 . . . 5.31 86.79 13 4.78 No 32 0.99 Yes 0 0 No -38 0.54 No 43 63.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190688168 + NM_000534 PMS1 0 . . . 9.46 82.35 44 6.02 Yes 25 2.05 Yes 0 0 No -33 0.45 No 33 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68852556 + NM_133509 RAD51B 0 . . . 1.52 0 29 5.39 No 17 1.21 Yes 0 0 No -29 0.35 No 35 49.99 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59806241 - NM_032043 BRIP1 0 . . . 6.12 78.42 12 5.74 Yes 33 0.32 No 0 0 No -26 0.35 No 41 64.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68334488 + NM_133509 RAD51B 0 . . . 5.26 72.64 21 5.54 No 26 0.87 Yes 0 0 No -20 0.27 No 32 75.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59790540 - NM_032043 BRIP1 0 . . . 2.08 73.98 12 4.75 No 54 1.26 Yes 0 0 No -41 0.82 Yes 40 49.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190685401 + NM_000534 PMS1 0 . . . 2.59 0 24 5.13 No 33 0.6 No 0 0 No -23 0.89 Yes 41 95.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68842538 + NM_133509 RAD51B 0 . . . 2.74 72.99 39 6.34 Yes 76 0.15 No 0 0 No -26 0.64 No 50 84.81 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190713239 + NM_000534 PMS1 0 . . . 2.67 0 21 5 No 45 0.01 No 0 0 No -20 0.5 No 25 87.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48033047 + NM_000179 MSH6 0 . . . 4.53 74.42 36 6.71 Yes 7 0.16 No 0 0 No -35 0.67 Yes 51 46.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152362484 - NM_005431 XRCC2 0 . . . 0.32 0 18 4.69 No 55 0.23 No 0 0 No -24 0.56 No 53 81.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190718876 + NM_000534 PMS1 0 . . . 3.23 68.27 14 5.92 Yes 53 1.37 Yes 0 0 No -22 0.87 Yes 41 36.43 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68362552 + NM_133509 RAD51B 0 . . . 8.45 75.66 28 5.19 No 47 0.01 No 0 0 No -22 0.74 Yes 42 84.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68948211 + NM_133509 RAD51B 0 . . . 0.9 0 21 9.8 Yes 69 0.01 No 0 0 No -41 0.54 No 39 65.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59780065 - NM_032043 BRIP1 0 . . . 0.67 66.75 22 5.6 Yes 46 -4.41 No 0 0 No -21 0.8 Yes 49 53.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84403903 - NM_139076 FAM175A 0 . . . 5.54 90.23 18 6.24 Yes -2 1.03 Yes 0 0 No -41 0.5 No 48 44.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47799704 + NM_000251 MSH2 0 . . . 5.44 76.9 20 4.69 No 60 -1.81 No 0 0 No -20 0.85 Yes 47 53.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94166725 - NM_005591 MRE11 0 . . . 1.16 0 44 5.61 Yes 19 0.63 No 0 0 No -29 0.57 No 39 86.31 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29116345 - NM_001005735 CHEK2 0 . . . 0.31 79.83 23 5.39 No 4 0.69 No 0 0 No -22 0.66 No 54 64.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105192706 + NM_021930 RINT1 0 . . . 1.22 57.08 20 5.3 No 63 -6.19 No 0 0 No -24 0.65 No 50 50.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89710239 + NM_000314 PTEN 0 . . . 0.05 59.17 21 6.08 Yes 74 0.8 Yes 0 0 No -20 0.69 Yes 33 70.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41238604 - NM_007294 BRCA1 0 . . . 6.32 90.41 57 7.39 Yes 21 1.47 Yes 0 0 No -21 0.46 No 42 79.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89628742 + NM_000314 PTEN 0 . . . 7.35 86.38 48 7.93 Yes 29 1.41 Yes 0 0 No -24 0.53 No 40 90.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108098786 + NM_000051 ATM 0 . . . 2.86 79 18 4.7 No 72 1.06 Yes 0 0 No -39 0.42 No 48 70.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68544515 + NM_133509 RAD51B 0 . . . 2.48 69.9 39 6.36 Yes 21 0.82 Yes 0 0 No -21 0.69 Yes 41 54.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68489722 + NM_133509 RAD51B 0 . . . 5.51 71.92 32 5.61 Yes 10 0.89 Yes 0 0 No -31 0.85 Yes 48 94.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104164555 - NM_001100119 XRCC3 0 . . . 3.35 65.56 22 4.69 No 56 1.67 Yes 0 0 No -28 0.45 No 44 59.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68957940 + NM_133509 RAD51B 0 . . . 3.96 80.55 16 4.68 No 70 0.78 Yes 0 0 No -19 0.43 No 47 50.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68295016 + NM_133509 RAD51B 0 . . . 1.72 74.94 17 4.31 No 45 1.01 Yes 0 0 No -21 0.63 No 48 64.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84384006 - NM_139076 FAM175A 0 . . . 5.58 98.09 38 6.81 Yes 61 0.92 Yes 0 0 No -37 0.61 No 47 82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68845888 + NM_133509 RAD51B 0 . . . 3.06 65.46 17 4.2 No 10 1.22 Yes 0 0 No -21 0.79 Yes 48 67.94 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29132878 - NM_001005735 CHEK2 0 . . . 0.03 66.56 30 5.95 Yes 29 1.44 Yes 0 0 No -29 0.53 No 49 49.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37051412 + NM_000249 MLH1 0 . . . 2.13 85.37 15 4.44 No 33 0.99 Yes 0 0 No -39 0.56 No 50 61.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6032925 - NM_000535 PMS2 0 . . . 5.6 88.95 31 5.91 Yes 9 1.09 Yes 0 0 No -30 0.76 Yes 49 96.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68617462 + NM_133509 RAD51B 0 . . . 3.11 71.46 27 6.31 Yes 76 1.97 Yes 0 0 No -27 0.82 Yes 47 51.66 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68413266 + NM_133509 RAD51B 0 . . . 4.03 85.02 16 4.95 No 4 1.02 Yes 0 0 No -20 0.66 No 49 63.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190691793 + NM_000534 PMS1 0 . . . 5.52 79.9 51 7.55 Yes 3 1.53 Yes 0 0 No -36 0.35 No 47 78.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47707890 + NM_000251 MSH2 0 . . . 1.01 73.75 34 5.99 Yes 67 1.86 Yes 0 0 No -33 0.55 No 48 72.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108097552 + NM_000051 ATM 0 . . . 0.93 84.22 17 6.55 Yes 33 1.54 Yes 0 0 No -16 0.75 Yes 25 49.2 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6033068 - NM_000535 PMS2 0 . . . 3.37 0 12 4.92 No 16 0.52 No 0 0 No -26 0.9 Yes 44 42.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47673906 + NM_000251 MSH2 0 . . . 1.23 78.39 28 5.38 No 2 1.52 Yes 0 0 No -42 0.43 No 44 52.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68959758 + NM_133509 RAD51B 0 . . . 1.27 78.14 11 5.2 No 59 0.11 No 0 0 No -20 0.59 No 42 24.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41221515 - NM_007294 BRCA1 0 . . . 5.02 78.18 18 4.05 No 63 0.53 No 0 0 No -25 0.45 No 43 69.65 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190707578 + NM_000534 PMS1 0 . . . 0.56 65.31 29 4.27 No 72 -5.61 No 0 0 No -21 0.8 Yes 49 80.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104167590 - NM_001100119 XRCC3 0 . . . 5.43 72.69 22 6.09 Yes 48 -1.31 No 0 0 No -30 0.83 Yes 33 20.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69042398 + NM_133509 RAD51B 0 . . . 6.78 80.96 12 4.9 No 3 2.35 Yes 0 0 No -20 0.57 No 38 55.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69019963 + NM_133509 RAD51B 0 . . . 7.26 78.15 23 6.16 Yes 45 1.24 Yes 0 0 No -22 0.71 Yes 41 64.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32910852 + NM_000059 BRCA2 0 . . . 1.45 73.26 20 3.56 No 35 1.18 Yes 0 0 No -22 0.56 No 49 56.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94192298 - NM_005591 MRE11 0 . . . 2.02 0 70 6.01 Yes 61 0.87 Yes 0 0 No -47 0.73 Yes 54 49.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6046715 - NM_000535 PMS2 0 . . . 1.3 67.82 28 5.79 Yes 50 0.19 No 0 0 No -27 0.67 Yes 37 18.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75519264 - NM_001040108 MLH3 0 . . . 1.28 65.28 32 5.61 Yes 35 0.55 No 0 0 No -31 0.89 Yes 52 34.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90980807 - NM_002485 NBN 0 . . . 1.68 79.63 28 5.38 No 75 1.08 Yes 0 0 No -27 0.48 No 41 65.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68823580 + NM_133509 RAD51B 0 . . . 0.3 61.05 11 5.1 No 50 0.83 Yes 0 0 No -19 0.56 No 42 38.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69011186 + NM_133509 RAD51B 0 . . . 2.7 75.1 20 5.74 Yes 17 0.49 No 0 0 No -30 0.38 No 41 82.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152361102 - NM_005431 XRCC2 0 . . . 4.59 76.01 23 6.47 Yes 73 -5.95 No 28 0.21 Yes -22 0.81 Yes 48 73.71 Yes BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr17 41202929 - NM_007294 BRCA1 0 . . . 3.05 61.18 17 5.29 No 38 0.5 No 0 0 No -26 0.63 No 36 59.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90956296 - NM_002485 NBN 0 . . . 2.29 56.21 28 5.56 Yes 68 1.04 Yes 0 0 No -27 0.86 Yes 34 20.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68424802 + NM_133509 RAD51B 0 . . . 1.85 67.01 26 5.1 No 39 1.23 Yes 0 0 No -25 0.57 No 36 88.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68571676 + NM_133509 RAD51B 0 . . . 0.11 0 18 5.01 No 54 0.2 No 0 0 No -22 0.87 Yes 39 75.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68528779 + NM_133509 RAD51B 0 . . . 6.65 87.98 21 5.04 No 54 0.59 No 0 0 No -20 0.57 No 46 79.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152367607 - NM_005431 XRCC2 0 . . . 2.38 67.32 21 8.99 Yes 24 0.76 No 0 0 No -20 0.84 Yes 34 64.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89695989 + NM_000314 PTEN 0 . . . 4 74.55 18 5.22 No 1 1.22 Yes 0 0 No -24 0.41 No 42 85.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68648900 + NM_133509 RAD51B 0 . . . 6.63 71.74 24 5.29 No 32 0.49 No 0 0 No -23 0.93 Yes 46 71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59911771 - NM_032043 BRIP1 0 . . . 7.22 96.74 21 5.15 No 28 0.38 No 0 0 No -20 0.8 Yes 51 49.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94157303 - NM_005591 MRE11 0 . . . 9.01 82.1 27 5.35 No 25 0.68 No 0 0 No -26 0.9 Yes 39 88.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59823727 - NM_032043 BRIP1 0 . . . 2.08 74.11 38 7.46 Yes 6 0.51 No 0 0 No -37 0.58 No 39 54.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68568480 + NM_133509 RAD51B 0 . . . 6.82 90.64 22 6.5 Yes 61 -3.1 No 0 0 No -21 0.93 Yes 50 73.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68810286 + NM_004360 CDH1 0 . . . 0.6 55.34 27 6.42 Yes 39 0.12 No 0 0 No -26 0.86 Yes 45 29.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68943903 + NM_133509 RAD51B 0 . . . 4.48 0 24 3.48 No 25 0.12 No 0 0 No -21 0.63 No 50 55.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190679333 + NM_000534 PMS1 0 . . . 6.63 80.14 17 4.69 No 45 0.44 No 0 0 No -44 0.63 No 40 88.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89653435 + NM_000314 PTEN 0 . . . 7.75 79.93 19 4.68 No 6 1.47 Yes 0 0 No -22 0.52 No 30 95.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68823871 + NM_133509 RAD51B 0 . . . 1.9 70.3 30 5.98 Yes 65 0.93 Yes 0 0 No -33 0.82 Yes 42 62.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37043902 + NM_000249 MLH1 0 . . . 4.66 67.78 17 7.05 Yes 46 0.02 No 0 0 No -22 0.68 Yes 37 72.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32961647 + NM_000059 BRCA2 0 . . . 1.61 81.77 21 4.69 No 24 0.71 No 0 0 No -21 0.78 Yes 61 30.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68684756 + NM_133509 RAD51B 0 . . . 4.09 79.33 35 5.71 Yes 30 -4.05 No 0 0 No -30 0.48 No 41 64.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69031770 + NM_133509 RAD51B 0 . . . 5.3 82.03 29 7.26 Yes 64 1.01 Yes 0 0 No -28 0.8 Yes 41 64.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75483271 - NM_001040108 MLH3 0 . . . 4.15 76.38 26 4.75 No 35 0.6 No 0 0 No -25 0.75 Yes 33 78.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89714955 + NM_000314 PTEN 0 . . . 2.05 0 21 5.54 No 22 1.09 Yes 0 0 No -20 0.59 No 36 84.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32891307 + NM_000059 BRCA2 0 . . . 2.65 69.25 15 3.49 No 40 -2.96 No 0 0 No -22 0.41 No 53 41.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68734900 + NM_133509 RAD51B 0 . . . 3.51 78.09 25 5.2 No 72 -0.64 No 0 0 No -24 0.85 Yes 34 67.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41277713 - NM_007294 BRCA1 0 . . . 3.61 72.29 25 5 No 75 0.12 No 0 0 No -20 0.68 Yes 50 94.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68795770 + NM_133509 RAD51B 0 . . . 4.35 86.62 15 4.58 No 47 0.47 No 0 0 No -23 0.57 No 44 68.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59908412 - NM_032043 BRIP1 0 . . . 2.28 81.8 14 4.42 No 30 0.99 Yes 0 0 No -37 0.75 Yes 40 70.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41005263 + NM_001164269 RAD51 0 . . . 2.24 80.12 37 5.61 Yes 7 1.02 Yes 0 0 No -31 0.71 Yes 46 72.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68900388 + NM_133509 RAD51B 0 . . . 1.49 0 29 5.48 No 9 1.53 Yes 0 0 No -28 0.94 Yes 40 63.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105201013 + NM_021930 RINT1 0 . . . 2.77 68.86 37 5.92 Yes -4 0.53 No 0 0 No -27 0.81 Yes 39 77.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59797139 - NM_032043 BRIP1 0 . . . 6.08 74.05 37 5.6 Yes 69 0.81 Yes 0 0 No -36 0.54 No 35 40.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108185396 + NM_000051 ATM 0 . . . 5.09 73.26 34 5.65 Yes 12 0.55 No 0 0 No -33 0.49 No 46 85.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68552566 + NM_133509 RAD51B 0 . . . 4.74 82.53 28 5.66 Yes 67 -1.18 No 0 0 No -27 0.81 Yes 45 78.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68798360 + NM_004360 CDH1 0 . . . 5.58 72.69 29 4.83 No 30 -2.21 No 0 0 No -26 0.36 No 42 61.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68800548 + NM_004360 CDH1 0 . . . 1.74 59.11 27 6.2 Yes 0 0.34 No 0 0 No -26 0.55 No 39 35.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29118338 - NM_001005735 CHEK2 0 . . . 2.2 72.26 30 4.89 No 30 1.19 Yes 0 0 No -38 0.59 No 28 75.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68814249 + NM_004360 CDH1 0 . . . 6.33 90.66 22 6.52 Yes 65 1.15 Yes 0 0 No -21 0.7 Yes 44 47.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89638015 + NM_000314 PTEN 0 . . . 5.2 85.02 13 5.48 No 5 1.23 Yes 0 0 No -23 0.5 No 53 85.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69007291 + NM_133509 RAD51B 0 . . . 1.22 51.38 16 4.69 No 69 1.29 Yes 0 0 No -18 0.37 No 43 45.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59837825 - NM_032043 BRIP1 0 . . . 8.13 81.64 34 4.77 No 9 1.26 Yes 0 0 No -29 0.72 Yes 37 82.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59774512 - NM_032043 BRIP1 0 . . . 0.72 77.77 19 4.69 No 19 -3.59 No 0 0 No -18 0.56 No 41 30.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68431521 + NM_133509 RAD51B 0 . . . 4.91 78.55 40 6.18 Yes 59 -5.2 No 0 0 No -26 0.77 Yes 47 59.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108094993 + NM_000051 ATM 0 . . . 2.83 78 18 4.64 No 69 -5.48 No 0 0 No -17 0.51 No 53 60.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215646763 - NM_000465 BARD1 0 . . . 3.98 72.6 22 5.41 No 32 0.28 No 0 0 No -21 0.8 Yes 47 91.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68634542 + NM_133509 RAD51B 0 . . . 7.44 75.29 27 5.48 No 58 1.67 Yes 0 0 No -26 0.79 Yes 47 58.53 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48035156 + NM_000179 MSH6 0 . . . 4.5 84.6 23 5.2 No 14 2.1 Yes 0 0 No -22 0.72 Yes 44 73.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68791542 + NM_133509 RAD51B 0 . . . 3.28 78.18 13 4.23 No 5 1.41 Yes 0 0 No -28 0.39 No 45 81.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68302086 + NM_133509 RAD51B 0 . . . 5.66 80.39 25 6.01 Yes 53 -1.92 No 0 0 No -24 0.64 No 48 93.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68673326 + NM_133509 RAD51B 0 . . . 2.42 74.22 32 5.8 Yes 29 0.37 No 0 0 No -19 0.5 No 50 52.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68570618 + NM_133509 RAD51B 0 . . . 3.36 67.84 14 3.4 No 71 0.3 No 0 0 No -23 0.24 No 45 34.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68544235 + NM_133509 RAD51B 0 . . . 3.38 75.45 57 6.68 Yes 63 0.08 No 0 0 No -20 0.54 No 49 67.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131974422 + NM_005732 RAD50 0 . . . 1.07 0 18 4.9 No 67 -5.32 No 0 0 No -18 0.61 No 47 68.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152365239 - NM_005431 XRCC2 0 . . . 7.96 81.99 22 4.68 No 11 0.11 No 0 0 No -22 0.65 No 43 46.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68821666 + NM_004360 CDH1 0 . . . 3.26 70.07 30 4.61 No 19 0.98 Yes 0 0 No -15 0.5 No 39 90.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37075389 + NM_000249 MLH1 0 . . . 8.45 85.86 16 4.69 No 23 0.63 No 0 0 No -19 0.46 No 35 57.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69022835 + NM_133509 RAD51B 0 . . . 4.88 80.33 19 5.57 Yes -3 0.68 No 0 0 No -24 0.77 Yes 38 85.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47695618 + NM_000251 MSH2 0 . . . 0.68 70.87 42 5.98 Yes 15 0.61 No 0 0 No -32 0.62 No 43 89.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56789592 + NM_058216 RAD51C 0 . . . 0.76 74.68 18 4.58 No 63 1.09 Yes 0 0 No -17 0.92 Yes 42 69.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21972052 - NM_000077 CDKN2A 0 . . . 1.97 80.56 24 4.75 No 27 1.2 Yes 0 0 No -23 0.82 Yes 35 65.73 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68885246 + NM_133509 RAD51B 0 . . . 1.07 67.12 26 6.01 Yes 67 1.94 Yes 0 0 No -25 0.76 Yes 45 79.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68805151 + NM_004360 CDH1 0 . . . 9.67 90.07 18 4.58 No 2 1.7 Yes 0 0 No -49 0.63 No 44 71.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68832149 + NM_004360 CDH1 0 . . . 2.77 83.68 20 6.54 Yes 73 -4.39 No 0 0 No -19 0.8 Yes 42 66.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59758631 - NM_032043 BRIP1 0 . . . 2.66 70.92 24 4.46 No 53 1 Yes 0 0 No -17 0.69 Yes 45 48.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68933269 + NM_133509 RAD51B 0 . . . 3 71.25 30 5.89 Yes 1 0.85 Yes 0 0 No -29 0.88 Yes 51 34.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105194666 + NM_021930 RINT1 0 . . . 4.27 79.33 27 5.59 Yes 71 0.9 Yes 0 0 No -26 0.79 Yes 31 53.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37075607 + NM_000249 MLH1 0 . . . 6.91 78.25 30 5.48 No 65 0.68 No 0 0 No -18 0.33 No 44 61.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89637605 + NM_000314 PTEN 0 . . . 4.66 68.77 18 4.9 No 62 0.46 No 0 0 No -27 0.21 No 48 76.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56768252 + NM_058216 RAD51C 0 . . . 2.41 0 20 6.98 Yes 12 0.82 Yes 0 0 No -19 0.55 No 46 88.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68839758 + NM_004360 CDH1 0 . . . 0.66 0 32 6.57 Yes 23 0.93 Yes 0 0 No -36 0.65 No 35 68.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59874769 - NM_032043 BRIP1 0 . . . 1 0 27 5 No 51 -2.77 No 0 0 No -26 0.63 No 47 57.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52439542 - NM_004656 BAP1 0 . . . 2.53 86.98 35 5.13 No 19 1.29 Yes 0 0 No -22 0.58 No 38 56.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68562975 + NM_133509 RAD51B 0 . . . 0.93 0 19 5.5 No 45 1.44 Yes 0 0 No -28 0.32 No 48 41.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68703732 + NM_133509 RAD51B 0 . . . 4.46 73.61 32 5.74 Yes 5 1.25 Yes 0 0 No -28 0.48 No 39 44.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68515105 + NM_133509 RAD51B 0 . . . 10.14 81.67 66 10.2 Yes 71 0.35 No 0 0 No -37 0.28 No 47 78.22 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59865915 - NM_032043 BRIP1 0 . . . 0.05 76.54 46 7.21 Yes 40 0.65 No 0 0 No -45 0.83 Yes 46 34.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68820144 + NM_133509 RAD51B 0 . . . 7.79 81.19 26 5.16 No 39 0.51 No 0 0 No -25 0.84 Yes 49 61.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47651031 + NM_000251 MSH2 0 . . . 1.28 61.49 45 7.68 Yes 45 1.15 Yes 0 0 No -44 0.68 Yes 37 67.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152347387 - NM_005431 XRCC2 0 . . . 0.9 75.18 22 5.29 No 45 0.97 Yes 0 0 No -21 0.76 Yes 47 91.04 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131972973 + NM_005732 RAD50 0 . . . 5.01 79.29 24 4.85 No 5 1.25 Yes 0 0 No -26 0.61 No 37 68.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68471652 + NM_133509 RAD51B 0 . . . 5.58 73.23 42 6.37 Yes 32 0.05 No 0 0 No -29 0.5 No 51 80.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68573374 + NM_133509 RAD51B 0 . . . 0.01 70.2 25 4.54 No 39 0.98 Yes 0 0 No -24 0.73 Yes 19 70.62 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89688019 + NM_000314 PTEN 0 . . . 5.29 82.71 19 5 No 28 0.29 No 0 0 No -18 0.53 No 49 50.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59895545 - NM_032043 BRIP1 0 . . . 1.83 74.55 32 5.73 Yes 49 0.28 No 0 0 No -26 0.41 No 32 56.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68891055 + NM_133509 RAD51B 0 . . . 2.3 65.96 16 4.69 No 52 0.8 Yes 0 0 No -19 0.84 Yes 47 95.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68962457 + NM_133509 RAD51B 0 . . . 1.88 79.19 21 6.69 Yes 48 0.3 No 0 0 No -24 0.62 No 39 68.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68871014 + NM_004360 CDH1 0 . . . 3.97 84.41 23 6.16 Yes 71 1.44 Yes 0 0 No -23 0.7 Yes 37 82.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69024612 + NM_133509 RAD51B 0 . . . 8.16 78.47 9 4.47 No 74 1.32 Yes 0 0 No -40 0.71 Yes 37 60.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59878301 - NM_032043 BRIP1 0 . . . 0.9 75.18 25 4.75 No 7 0.18 No 0 0 No -24 0.96 Yes 36 71.01 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68612210 + NM_133509 RAD51B 0 . . . 0.49 62.9 36 6.65 Yes 42 0.37 No 0 0 No -20 0.48 No 35 37.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94152136 - NM_005591 MRE11 0 . . . 6.01 84.73 37 7.82 Yes 40 -3.87 No 0 0 No -27 0.73 Yes 48 63.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69008200 + NM_133509 RAD51B 0 . . . 3.21 69.43 25 5.57 Yes 63 0.79 Yes 0 0 No -24 0.59 No 26 29.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94172034 - NM_005591 MRE11 0 . . . 4.43 81.99 13 3.87 No 7 0.2 No 0 0 No -41 0.38 No 42 91.93 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68298599 + NM_133509 RAD51B 0 . . . 5.18 78.73 29 4.49 No 26 0.99 Yes 0 0 No -27 0.49 No 51 74.83 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6022671 - NM_000535 PMS2 0 . . . 3.02 67.72 15 5.48 No 25 1.07 Yes 0 0 No -55 0.52 No 12 51.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47769447 + NM_000251 MSH2 0 . . . 0.37 70.59 23 5.89 Yes 17 0.01 No 0 0 No -22 0.54 No 41 27.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68746972 + NM_133509 RAD51B 0 . . . 3.13 76.81 18 5.66 Yes 49 1.42 Yes 0 0 No -54 0.39 No 37 78.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59824488 - NM_032043 BRIP1 0 . . . 4.09 69.04 35 4.71 No 64 0.5 No 0 0 No -23 0.76 Yes 30 95.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68448113 + NM_133509 RAD51B 0 . . . 2.08 59.77 24 5.82 Yes 43 0.84 Yes 0 0 No -23 0.66 No 53 38.76 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6036021 - NM_000535 PMS2 0 . . . 7.12 85.02 23 5.06 No 5 1.2 Yes 0 0 No -56 0.64 No 36 69.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41022764 + NM_001164269 RAD51 0 . . . 3.51 81.49 21 7.07 Yes 49 0.31 No 0 0 No -20 0.83 Yes 9 28.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68525023 + NM_133509 RAD51B 0 . . . 4.35 72.58 51 7.19 Yes 50 1.86 Yes 0 0 No -32 0.7 Yes 36 75.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68432783 + NM_133509 RAD51B 0 . . . 5.62 82.99 54 7.28 Yes 38 0.42 No 0 0 No -28 0.52 No 53 61.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68854298 + NM_004360 CDH1 0 . . . 4.71 84.17 32 6.56 Yes 51 1.52 Yes 0 0 No -24 0.49 No 26 40.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68385902 + NM_133509 RAD51B 0 . . . 5.36 73.99 34 4.85 No 60 0.95 Yes 0 0 No -26 0.66 No 63 34.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37065510 + NM_000249 MLH1 0 . . . 1.55 70.1 36 5.92 Yes 27 -1.78 No 0 0 No -35 0.81 Yes 48 71.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 40989322 + NM_001164269 RAD51 0 . . . 1.42 0 25 5.51 No 39 1.71 Yes 0 0 No -24 0.42 No 43 49.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68681990 + NM_133509 RAD51B 0 . . . 4.36 79.76 14 4.47 No 57 0.45 No 0 0 No -13 0.31 No 43 89.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108208325 + NM_000051 ATM 0 . . . 4.12 79.27 27 5.28 No 54 -5.43 No 0 0 No -21 0.69 Yes 43 62.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68925879 + NM_133509 RAD51B 0 . . . 2.06 0 23 5.23 No 14 1.14 Yes 0 0 No -22 0.85 Yes 44 88.64 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69045337 + NM_133509 RAD51B 0 . . . 7.75 83.41 30 5.7 Yes 18 1.02 Yes 0 0 No -29 0.62 No 51 63.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45797346 - NM_001048171 MUTYH 0 . . . 3.28 84.19 19 7.07 Yes NA NA NA 0 0 No -30 0.57 No 29 36.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89660846 + NM_000314 PTEN 0 . . . 2.02 75.14 20 5.28 No 43 0.46 No 0 0 No -24 0.43 No 37 76.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47695381 + NM_000251 MSH2 0 . . . 5.16 78.17 19 5.38 No 14 0.32 No 0 0 No -18 0.46 No 44 85.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33441863 - NM_002878 RAD51D 0 . . . 2.33 0 35 6.24 Yes 32 0.95 Yes 0 0 No -34 0.73 Yes 39 56.85 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68565324 + NM_133509 RAD51B 0 . . . 3.16 66.75 31 6.71 Yes 1 0.14 No 0 0 No -30 0.65 No 48 24.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59886076 - NM_032043 BRIP1 0 . . . 3.35 70.99 10 4.65 No 35 0.59 No 0 0 No -17 0.63 No 60 22.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6010634 - NM_000535 PMS2 0 . . . 5.77 85.19 19 4.99 No NA NA NA 0 0 No -31 0.57 No 46 61.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68740319 + NM_133509 RAD51B 0 . . . 1.91 0 18 5.23 No 60 -2.84 No 0 0 No -18 0.42 No 42 68.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37047457 + NM_000249 MLH1 0 . . . 1.05 0 43 5.29 No 50 1.68 Yes 0 0 No -26 0.64 No 49 68.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48025771 + NM_000179 MSH6 0 . . . 1.5 72.98 20 4.5 No 76 0.42 No 0 0 No -19 0.72 Yes 14 79.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89641956 + NM_000314 PTEN 0 . . . 4.96 91.21 42 6.6 Yes 12 0.95 Yes 0 0 No -27 0.66 Yes 46 97.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68667911 + NM_133509 RAD51B 0 . . . 3.66 60.72 38 6.64 Yes 40 0.22 No 0 0 No -20 0.89 Yes 46 80.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68378588 + NM_133509 RAD51B 0 . . . 6.48 77.73 25 5.08 No 60 1.18 Yes 0 0 No -24 0.88 Yes 42 51.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215599629 - NM_000465 BARD1 0 . . . 0.44 69.47 16 5.04 No 70 1.62 Yes 0 0 No -20 0.74 Yes 50 41.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108183085 + NM_000051 ATM 0 . . . 2.81 82.18 28 6.32 Yes 56 0.88 Yes 0 0 No -27 0.55 No 55 46.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94151650 - NM_005591 MRE11 0 . . . 0.44 0 11 6.85 Yes 1 0.28 No 0 0 No -38 0.4 No 45 67.11 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59917185 - NM_032043 BRIP1 0 . . . 9.04 82.13 21 5.39 No 27 0.56 No 0 0 No -21 0.62 No 44 62.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152349824 - NM_005431 XRCC2 0 . . . 0.21 0 18 5.29 No 37 0.77 No 0 0 No -28 0.56 No 41 83.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131978082 + NM_005732 RAD50 0 . . . 1.08 71 20 4.69 No 26 0.19 No 0 0 No -19 0.94 Yes 48 59.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84398440 - NM_139076 FAM175A 0 . . . 3.4 59.06 66 9.15 Yes -1 0.54 No 0 0 No -21 0.89 Yes 40 52.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68991242 + NM_133509 RAD51B 0 . . . 2.18 71.19 29 6.19 Yes 1 0.01 No 0 0 No -28 0.7 Yes 57 44.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68981942 + NM_133509 RAD51B 0 . . . 2.75 63.02 12 5.29 No 56 2.25 Yes 0 0 No -59 0.48 No 26 67.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68290322 + NM_133509 RAD51B 0 . . . 3.01 61.99 46 8.23 Yes 1 0.55 No 0 0 No -20 0.51 No 43 34.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47786686 + NM_000251 MSH2 0 . . . 1.74 66.71 19 4.06 No 19 0.86 Yes 0 0 No -18 0.37 No 39 95.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108096826 + NM_000051 ATM 0 . . . 5.71 76.97 29 6.86 Yes 17 -1.65 No 0 0 No -28 0.93 Yes 42 75.77 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215591098 - NM_000465 BARD1 0 . . . 5.35 71.6 17 4.57 No 9 1.53 Yes 0 0 No -48 0.34 No 43 77.16 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215594830 - NM_000465 BARD1 0 . . . 3.64 68.54 32 5.74 Yes 9 0.5 No 0 0 No -28 0.39 No 49 96.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41269358 - NM_007294 BRCA1 0 . . . 2.92 76.24 61 8.33 Yes 35 0.99 Yes 0 0 No -34 0.58 No 50 56.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37033314 + NM_000249 MLH1 0 . . . 3.66 63.42 25 5.53 No 12 0.24 No 0 0 No -24 0.72 Yes 46 79.71 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48019667 + NM_000179 MSH6 0 . . . 4.84 73.86 21 3.89 No 18 1.43 Yes 0 0 No -23 0.54 No 40 85.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68294526 + NM_133509 RAD51B 0 . . . 3.22 70.33 44 6.96 Yes 21 0.56 No 0 0 No -28 0.77 Yes 31 49.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190649548 + NM_000534 PMS1 0 . . . 9.09 81.63 25 5.35 No 45 -0.61 No 0 0 No -22 0.76 Yes 13 43.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75499619 - NM_001040108 MLH3 0 . . . 7.06 69.4 36 6.48 Yes 24 0.75 No 0 0 No -35 0.81 Yes 33 61.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68732136 + NM_133509 RAD51B 0 . . . 7.39 83.29 29 5.39 No 65 0.14 No 0 0 No -28 0.72 Yes 45 51.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68881048 + NM_133509 RAD51B 0 . . . 6.06 65.28 26 5.62 Yes 68 0.57 No 0 0 No -28 0.65 No 48 43.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68395809 + NM_133509 RAD51B 0 . . . 5.74 80.6 20 5.48 No 30 0.53 No 0 0 No -30 0.68 Yes 31 46.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68773421 + NM_004360 CDH1 0 . . . 2.37 85.34 35 4.74 No 8 0.39 No 0 0 No -28 0.45 No 50 94.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68864452 + NM_133509 RAD51B 0 . . . 3.75 0 16 5.22 No 1 1.15 Yes 0 0 No -26 0.73 Yes 47 57.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68813022 + NM_004360 CDH1 0 . . . 3.71 72.18 32 6.33 Yes 44 0.35 No 0 0 No -31 0.89 Yes 36 52.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105175512 + NM_021930 RINT1 0 . . . 4.76 71.79 16 5.38 No 74 0.07 No 0 0 No -24 0.49 No 36 60.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47680631 + NM_000251 MSH2 0 . . . 2.47 76.97 21 5.67 Yes 64 1.25 Yes 0 0 No -20 0.62 No 40 82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108165992 + NM_000051 ATM 0 . . . 8.84 85.31 22 4.8 No 37 2.02 Yes 0 0 No -21 0.94 Yes 33 83.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94197150 - NM_005591 MRE11 0 . . . 1.01 58.55 21 4.03 No 35 0.46 No 0 0 No -25 0.69 Yes 38 65.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68308810 + NM_133509 RAD51B 0 . . . 5.26 77.11 48 5.18 No 26 0.27 No 0 0 No -34 0.66 No 44 69.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668035 - NM_000465 BARD1 0 . . . 1.52 0 17 4.8 No 36 0.39 No 0 0 No -37 0.35 No 48 63.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108196335 + NM_000051 ATM 0 . . . 3.93 71.85 59 8.31 Yes 23 1.26 Yes 0 0 No -45 0.47 No 35 88.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68288199 + NM_133509 RAD51B 0 . . . 9.23 89.87 36 5.93 Yes 47 -1.85 No 0 0 No -29 0.77 Yes 34 90.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68630596 + NM_133509 RAD51B 0 . . . 4.4 81.03 32 6.57 Yes 45 0.37 No 0 0 No -31 0.63 No 50 69.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47755235 + NM_000251 MSH2 0 . . . 1.08 0 16 5.03 No 1 0.34 No 0 0 No -27 0.5 No 44 92.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48018016 + NM_000179 MSH6 0 . . . 2.91 76.7 18 6 Yes 75 0.91 Yes 0 0 No -26 0.47 No 47 45.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215672198 - NM_000465 BARD1 0 . . . 4.53 73.67 49 5.02 No 9 0.8 Yes 0 0 No -34 0.62 No 42 41.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21980000 - NM_000077 CDKN2A 0 . . . 1.3 69.78 29 5.85 Yes 52 1.21 Yes 0 0 No -28 0.63 No 23 24.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90959612 - NM_002485 NBN 0 . . . 1.21 66.56 29 4.14 No 13 0.76 No 0 0 No -28 0.75 Yes 40 74.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68840877 + NM_133509 RAD51B 0 . . . 6.84 87.06 22 5.83 Yes 76 -5.08 No 0 0 No -21 0.76 Yes 46 70.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69115017 + NM_133509 RAD51B 0 . . . 1.64 62.76 18 5.24 No -4 0.92 Yes 0 0 No -27 0.53 No 47 45.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68921688 + NM_133509 RAD51B 0 . . . 4.51 81.56 18 4.36 No -4 0.38 No 0 0 No -17 0.83 Yes 54 41.31 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68361755 + NM_133509 RAD51B 0 . . . 3.51 68.37 25 5.57 Yes 18 0.7 No 0 0 No -22 0.66 Yes 40 70.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47673364 + NM_000251 MSH2 0 . . . 4.13 77.24 21 6 Yes 70 0.93 Yes 0 0 No -20 0.79 Yes 46 58.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29139381 - NM_001005735 CHEK2 0 . . . 4.21 73.27 27 5.18 No 32 1.29 Yes 0 0 No -26 0.92 Yes 49 62.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68414363 + NM_133509 RAD51B 0 . . . 1.18 83.5 15 4.68 No 56 0.37 No 0 0 No -28 0.58 No 48 50.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47704486 + NM_000251 MSH2 0 . . . 0.68 82.88 35 6.08 Yes 73 1.19 Yes 0 0 No -34 0.7 Yes 46 52.17 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68787503 + NM_004360 CDH1 0 . . . 3.24 68.34 39 7.63 Yes 21 1.76 Yes 0 0 No -38 0.77 Yes 37 84.28 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68366586 + NM_133509 RAD51B 0 . . . 0.87 73.11 24 5.09 No -2 0.09 No 0 0 No -23 0.83 Yes 46 97.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152353701 - NM_005431 XRCC2 0 . . . 0.69 72.97 9 5.29 No 63 -6.05 No 0 0 No -54 0.66 No 38 36.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68508471 + NM_133509 RAD51B 0 . . . 3.97 70.48 24 6.61 Yes -4 1.98 Yes 0 0 No -23 0.96 Yes 42 72.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68782639 + NM_004360 CDH1 0 . . . 2.94 76.77 12 4.61 No 5 0.91 Yes 0 0 No -23 0.48 No 41 55.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68410944 + NM_133509 RAD51B 0 . . . 9.59 94.37 19 4.87 No 25 0.41 No 0 0 No -18 0.65 No 40 63.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59813809 - NM_032043 BRIP1 0 . . . 3.9 77.75 16 3.48 No 0 0 No 0 0 No -20 0.78 Yes 46 31.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131920454 + NM_005732 RAD50 0 . . . 1.2 67.82 22 5.24 No 66 -5.56 No 0 0 No -21 0.79 Yes 43 53.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68573750 + NM_133509 RAD51B 0 . . . 4.48 84.71 27 5.47 No 8 1.15 Yes 0 0 No -26 0.94 Yes 50 96.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59804810 - NM_032043 BRIP1 0 . . . 1.03 58.41 16 4.58 No 50 -4.9 No 0 0 No -52 0.86 Yes 44 24.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108226073 + NM_000051 ATM 0 . . . 0.78 74.95 22 5.29 No 65 -4.22 No 0 0 No -26 0.63 No 51 71.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68489155 + NM_133509 RAD51B 0 . . . 10.62 98.8 23 5.36 No 75 0.64 No 0 0 No -20 0.32 No 50 52.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190649668 + NM_000534 PMS1 0 . . . 1.09 65.83 15 3.3 No 43 1.52 Yes 0 0 No -15 0.38 No 40 65.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23620645 - NM_024675 PALB2 0 . . . 1.51 80.53 17 4.32 No 76 1.53 Yes 0 0 No -23 0.5 No 50 83.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29107293 - NM_001005735 CHEK2 0 . . . 0.58 63.26 21 7.12 Yes 52 0.99 Yes 0 0 No -20 0.63 No 34 75.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68859348 + NM_004360 CDH1 0 . . . 5.33 76.09 28 5.74 Yes NA NA NA 0 0 No -27 0.82 Yes 49 42.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68508385 + NM_133509 RAD51B 0 . . . 3.94 70.6 41 7.01 Yes 30 1.35 Yes 0 0 No -36 0.4 No 28 96.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68400440 + NM_133509 RAD51B 0 . . . 0.67 64.78 27 4.62 No 51 1.03 Yes 0 0 No -19 0.85 Yes 48 67.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68837949 + NM_004360 CDH1 0 . . . 3.36 77.06 28 5.37 No 28 0.44 No 0 0 No -27 0.45 No 30 78.55 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108165116 + NM_000051 ATM 0 . . . 4.73 87.22 22 4.96 No 3 0.1 No 0 0 No -21 0.62 No 42 33.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215616019 - NM_000465 BARD1 0 . . . 2.42 70.68 13 2.73 No 52 0.68 No 0 0 No -29 0.27 No 47 62.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59933702 - NM_032043 BRIP1 0 . . . 6.55 86.67 47 7.06 Yes 28 1.99 Yes 0 0 No -21 0.82 Yes 30 64.92 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89707275 + NM_000314 PTEN 0 . . . 6.05 79.14 75 7.71 Yes 5 1.03 Yes 0 0 No -25 0.41 No 41 85.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94193112 - NM_005591 MRE11 0 . . . 3.44 0 39 6.01 Yes 12 1.64 Yes 0 0 No -38 0.53 No 46 91.58 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40986363 + NM_001164269 RAD51 0 . . . 0.46 83.85 26 5.1 No -3 0.62 No 0 0 No -33 0.28 No 45 69.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48029157 + NM_000179 MSH6 0 . . . 1.93 60.83 26 6.39 Yes 51 -2.6 No 0 0 No -25 0.58 No 37 51.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7568540 - NM_000546 TP53 0 . . . 4.04 85.02 19 5 No 4 0.6 No 0 0 No -34 0.36 No 43 59.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89721357 + NM_000314 PTEN 0 . . . 3.09 68.64 32 4.88 No -3 0.66 No 0 0 No -31 0.37 No 32 51.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274098 - NM_007294 BRCA1 0 . . . 5.66 72.89 24 6.81 Yes 20 1.48 Yes 0 0 No -23 0.76 Yes 38 66.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32890339 + NM_000059 BRCA2 0 . . . 4.85 77.66 31 4.77 No 70 1.69 Yes 0 0 No -30 0.48 No 44 73.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32966703 + NM_000059 BRCA2 0 . . . 2.17 0 41 5.94 Yes 71 -5.83 No 0 0 No -27 0.68 Yes 38 73.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69019253 + NM_133509 RAD51B 0 . . . 2.4 69.69 20 5.07 No 37 1.14 Yes 0 0 No -19 0.33 No 45 28.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215600493 - NM_000465 BARD1 0 . . . 1.43 56.41 15 4.58 No 15 2.13 Yes 0 0 No -39 0.46 No 43 88.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68585606 + NM_133509 RAD51B 0 . . . 3.35 81.42 31 5.57 Yes 53 0.53 No 0 0 No -30 0.71 Yes 53 44.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190687364 + NM_000534 PMS1 0 . . . 2.72 70.52 47 4.98 No 6 0.43 No 0 0 No -24 0.41 No 52 40.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215613305 - NM_000465 BARD1 0 . . . 2.02 78.69 24 6.61 Yes 34 1.5 Yes 0 0 No -23 0.84 Yes 51 37.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59771977 - NM_032043 BRIP1 0 . . . 1.41 69.21 28 6.71 Yes 74 -7.09 No 0 0 No -27 0.94 Yes 44 31.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69067669 + NM_133509 RAD51B 0 . . . 0.18 0 44 5.61 Yes 29 0.14 No 0 0 No -27 0.8 Yes 43 79.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68742357 + NM_133509 RAD51B 0 . . . 9.04 82.39 29 5.39 No 56 -3.21 No 0 0 No -22 0.74 Yes 36 74.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21975986 - NM_000077 CDKN2A 0 . . . 4.14 75.24 15 5 No 73 -4.25 No 0 0 No -18 0.45 No 41 71.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23615446 - NM_024675 PALB2 0 . . . 0.44 71.05 10 5.29 No 56 -3.66 No 0 0 No -21 0.52 No 49 29.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131940681 + NM_005732 RAD50 0 . . . 0.2 0 33 6.63 Yes 7 0.96 Yes 0 0 No -32 0.89 Yes 51 77.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68705520 + NM_133509 RAD51B 0 . . . 2.22 71.56 26 5.29 No -3 0.02 No 0 0 No -25 0.94 Yes 51 56.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89632752 + NM_000314 PTEN 0 . . . 1.88 76.26 23 6.02 Yes 2 0.55 No 0 0 No -20 0.65 No 44 50.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215622112 - NM_000465 BARD1 0 . . . 2.89 73.41 19 4.77 No 41 0.37 No 0 0 No -21 0.57 No 44 86.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68676552 + NM_133509 RAD51B 0 . . . 5.49 75.68 15 4.42 No -1 1.61 Yes 0 0 No -49 0.78 Yes 35 66.12 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69030565 + NM_133509 RAD51B 0 . . . 6.85 73.11 26 6.15 Yes 63 1.64 Yes 0 0 No -25 0.89 Yes 43 55.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59763022 - NM_032043 BRIP1 0 . . . 0.86 80.16 45 8.75 Yes 9 0.49 No 0 0 No -44 0.96 Yes 48 81.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68289145 + NM_133509 RAD51B 0 . . . 0.32 74.68 26 5.65 Yes 11 1.52 Yes 0 0 No -31 0.49 No 47 91.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68290541 + NM_133509 RAD51B 0 . . . 5.11 65.76 61 7.87 Yes 71 0.6 No 0 0 No -31 0.72 Yes 43 70.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68712157 + NM_133509 RAD51B 0 . . . 2.92 65.77 18 5.71 Yes 19 -2.2 No 0 0 No -26 0.83 Yes 39 94.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89676284 + NM_000314 PTEN 0 . . . 6 78.78 28 5.83 Yes 2 0 No 0 0 No -27 0.81 Yes 50 84.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33425148 - NM_002878 RAD51D 0 . . . 2.19 60.26 25 4.57 No 17 0.31 No 0 0 No -24 0.9 Yes 41 50.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59937178 - NM_032043 BRIP1 0 . . . 8.44 82.01 22 4.79 No 5 0.89 Yes 0 0 No -19 0.52 No 47 92.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68526452 + NM_133509 RAD51B 0 . . . 6.23 73.35 22 6.53 Yes 39 0.86 Yes 0 0 No -21 0.4 No 42 43.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68978326 + NM_133509 RAD51B 0 . . . 2.03 66.02 15 5 No 10 1.38 Yes 0 0 No -18 0.21 No 40 66.38 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68474835 + NM_133509 RAD51B 0 . . . 1.43 67.19 18 4.78 No 58 0.24 No 0 0 No -21 0.83 Yes 41 85.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59759587 - NM_032043 BRIP1 0 . . . 7.68 73.98 21 4.3 No 19 0.34 No 0 0 No -26 0.71 Yes 43 52.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68821485 + NM_133509 RAD51B 0 . . . 2.27 80.22 34 6.43 Yes 35 0.52 No 0 0 No -27 0.34 No 15 80.49 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89668838 + NM_000314 PTEN 0 . . . 2.57 62.15 19 4.89 No 63 0.64 No 0 0 No -18 0.48 No 46 94.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68812884 + NM_004360 CDH1 0 . . . 2.3 70.27 23 4.8 No 15 0.25 No 0 0 No -21 0.29 No 43 96.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47719396 + NM_000251 MSH2 0 . . . 3.01 71.38 29 5.74 Yes 17 0.05 No 0 0 No -29 0.57 No 31 41.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21992513 - NM_000077 CDKN2A 0 . . . 3.35 74.66 23 4.83 No 37 -4.4 No 0 0 No -22 0.75 Yes 32 49.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47742486 + NM_000251 MSH2 0 . . . 4.33 74.76 24 5.29 No 4 1.77 Yes 0 0 No -23 0.81 Yes 44 61.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68520216 + NM_133509 RAD51B 0 . . . 2.13 74.85 24 5.81 Yes 38 2.24 Yes 0 0 No -27 0.62 No 20 42.38 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68819048 + NM_133509 RAD51B 0 . . . 7.28 91.02 26 5.57 Yes 39 1.18 Yes 0 0 No -25 0.76 Yes 46 85.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56809565 + NM_058216 RAD51C 0 . . . 7.6 77.51 43 7.91 Yes 28 1.09 Yes 0 0 No -33 0.69 Yes 45 79.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56808208 + NM_058216 RAD51C 0 . . . 0.22 73.21 25 5.78 Yes 35 0.27 No 0 0 No -24 0.68 Yes 23 78.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59874609 - NM_032043 BRIP1 0 . . . 3.42 77.43 25 5.46 No 62 1.43 Yes 0 0 No -24 0.8 Yes 35 63.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68522896 + NM_133509 RAD51B 0 . . . 1.98 83.32 37 6.33 Yes 19 0.7 No 0 0 No -36 0.79 Yes 39 88.43 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108186638 + NM_000051 ATM 0 . . . 5.43 68.84 16 6.16 Yes 66 -4.56 No 0 0 No -25 0.41 No 43 56.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68451192 + NM_133509 RAD51B 0 . . . 5.53 84.42 24 5.85 Yes 51 1.5 Yes 0 0 No -23 0.71 Yes 44 58.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75512351 - NM_001040108 MLH3 0 . . . 3.78 80.91 31 5.99 Yes 22 0.62 No 0 0 No -25 0.85 Yes 14 25.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68303770 + NM_133509 RAD51B 0 . . . 5.61 76.77 45 6.65 Yes 59 0.65 No 0 0 No -40 0.52 No 48 68.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215649144 - NM_000465 BARD1 0 . . . 4.74 70.73 21 5.57 Yes 8 0.97 Yes 0 0 No -20 0.6 No 50 69.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68784632 + NM_004360 CDH1 0 . . . 8.36 85.05 29 5.34 No 40 0.15 No 0 0 No -28 0.95 Yes 32 75.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32926033 + NM_000059 BRCA2 0 . . . 6.5 81.31 34 5.92 Yes 52 1.47 Yes 0 0 No -52 0.7 Yes 49 94.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190689496 + NM_000534 PMS1 0 . . . 3.21 76.76 16 5.42 No 15 0.22 No 0 0 No -23 0.72 Yes 49 45.47 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68510141 + NM_133509 RAD51B 0 . . . 2.75 74.4 29 7.41 Yes 12 0.66 No 0 0 No -28 0.73 Yes 39 75.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68414826 + NM_133509 RAD51B 0 . . . 0.3 62.48 17 5.61 Yes 10 -1.8 No 0 0 No -25 0.81 Yes 47 28.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68821284 + NM_133509 RAD51B 0 . . . 1.89 65.54 34 6.16 Yes 37 1.13 Yes 0 0 No -36 0.62 No 42 55.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69065514 + NM_133509 RAD51B 0 . . . 8.48 95.1 28 5.45 No 12 -0.21 No 0 0 No -27 0.84 Yes 46 77.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215593980 - NM_000465 BARD1 0 . . . 3.82 79.03 36 4.65 No 29 -2.24 No 0 0 No -29 0.66 No 45 70.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69109431 + NM_133509 RAD51B 0 . . . 2.77 70.73 18 4.58 No 42 0.46 No 0 0 No -44 0.77 Yes 16 52.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47663060 + NM_000251 MSH2 0 . . . 1.13 0 31 6.08 Yes 63 1.07 Yes 0 0 No -30 0.93 Yes 29 82.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69047487 + NM_133509 RAD51B 0 . . . 5.31 77.43 26 5.93 Yes 54 1.88 Yes 0 0 No -25 0.7 Yes 50 52.46 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47648337 + NM_000251 MSH2 0 . . . 2.63 80.22 12 4.25 No 15 0.6 No 0 0 No -45 0.46 No 55 62.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47806391 + NM_000251 MSH2 0 . . . 9.42 81.29 25 4.9 No 27 0.96 Yes 0 0 No -24 0.44 No 39 50.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108128648 + NM_000051 ATM 0 . . . 6.78 85.07 19 5.83 Yes 2 1.63 Yes 0 0 No -27 0.81 Yes 15 63.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69044157 + NM_133509 RAD51B 0 . . . 4.64 0 17 6.08 Yes 23 1.04 Yes 0 0 No -16 0.78 Yes 35 82.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190671464 + NM_000534 PMS1 0 . . . 4.44 80.31 34 6.16 Yes 8 0.57 No 0 0 No -31 0.65 No 29 40.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94201965 - NM_005591 MRE11 0 . . . 4.23 70.45 42 6.78 Yes 16 0.03 No 0 0 No -42 0.36 No 42 45.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59806424 - NM_032043 BRIP1 0 . . . 3.72 75.87 23 4.6 No 56 0.95 Yes 0 0 No -41 0.46 No 43 44.13 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108197521 + NM_000051 ATM 0 . . . 2.04 66.88 28 6.75 Yes 76 -2.14 No 0 0 No -34 0.77 Yes 50 72.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr19 1219851 + NM_000455 STK11 0 . . . 3.15 72.02 13 4.35 No 65 1.67 Yes 0 0 No -29 0.48 No 52 24.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131980389 + NM_005732 RAD50 0 . . . 1.17 0 24 5.19 No 28 1.03 Yes 0 0 No -23 0.8 Yes 30 63.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89694333 + NM_000314 PTEN 0 . . . 2.14 62.72 21 4.8 No 42 0.64 No 0 0 No -20 0.75 Yes 16 47.44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68651267 + NM_133509 RAD51B 0 . . . 6.83 72.73 18 4.69 No 65 0.74 No 0 0 No -21 0.54 No 47 75.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75515541 - NM_001040108 MLH3 0 . . . 5.26 80.01 18 4.57 No 1 1.36 Yes 0 0 No -17 0.52 No 45 90.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68753787 + NM_133509 RAD51B 0 . . . 1.45 76.49 25 5.07 No 11 1 Yes 0 0 No -24 0.55 No 47 94.64 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68380906 + NM_133509 RAD51B 0 . . . 0.98 72.33 25 5.56 Yes 29 1.16 Yes 0 0 No -25 0.33 No 46 33.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69019307 + NM_133509 RAD51B 0 . . . 1.11 66.56 19 5 No 28 0.12 No 0 0 No -39 0.48 No 46 55.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68658829 + NM_133509 RAD51B 0 . . . 9.48 92.27 30 5.42 No 61 1.69 Yes 0 0 No -29 0.69 Yes 45 95.05 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68398718 + NM_133509 RAD51B 0 . . . 3.22 0 18 5.99 Yes 19 1.18 Yes 0 0 No -27 0.59 No 39 68.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32894750 + NM_000059 BRCA2 0 . . . 0.08 0 16 6.65 Yes 68 0.6 No 0 0 No -19 0.51 No 34 85.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69110129 + NM_133509 RAD51B 0 . . . 3.45 68.59 22 5.27 No 17 0.76 No 0 0 No -21 0.76 Yes 34 80.79 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68840079 + NM_004360 CDH1 0 . . . 0.95 0 29 6.33 Yes 51 1.08 Yes 0 0 No -26 0.6 No 37 36.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59798075 - NM_032043 BRIP1 0 . . . 0.5 61.78 15 4.58 No 0 0.24 No 0 0 No -39 0.84 Yes 41 44.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104167685 - NM_001100119 XRCC3 0 . . . 2.49 65.27 29 5.63 Yes 10 -0.9 No 0 0 No -28 0.63 No 48 91.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68798877 + NM_133509 RAD51B 0 . . . 3.18 74.78 24 5.42 No 7 1.35 Yes 0 0 No -23 0.81 Yes 37 59.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47680896 + NM_000251 MSH2 0 . . . 7.78 84.77 15 3.6 No 8 0.87 Yes 0 0 No -22 0.87 Yes 50 64.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90946627 - NM_002485 NBN 0 . . . 4.18 81.23 31 6.07 Yes 69 0.97 Yes 0 0 No -26 0.28 No 47 37.66 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89657759 + NM_000314 PTEN 0 . . . 4.27 65.03 19 5.48 No 60 1.72 Yes 0 0 No -56 0.4 No 47 87.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29106848 - NM_001005735 CHEK2 0 . . . 4.01 76.12 21 4.67 No 22 0.53 No 0 0 No -20 0.44 No 43 54.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131903077 + NM_005732 RAD50 0 . . . 6.96 82.84 28 6.4 Yes 6 0.7 No 0 0 No -28 0.58 No 42 72.71 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68944640 + NM_133509 RAD51B 0 . . . 2.53 67.83 24 4.79 No 17 0.41 No 0 0 No -24 0.55 No 41 85.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59827005 - NM_032043 BRIP1 0 . . . 6.86 82.25 11 3.98 No 45 0.71 No 0 0 No -25 0.52 No 49 81.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32941254 + NM_000059 BRCA2 0 . . . 2.73 82 161 9.52 Yes 14 0.17 No 0 0 No -36 0.73 Yes 44 62.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68812664 + NM_004360 CDH1 0 . . . 3.28 82.16 40 6.06 Yes 14 1.34 Yes 0 0 No -29 0.63 No 44 89.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68348953 + NM_133509 RAD51B 0 . . . 3.24 73.52 15 5.2 No 18 0.21 No 0 0 No -24 0.89 Yes 40 93.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41220541 - NM_007294 BRCA1 0 . . . 3.97 81.75 18 4.9 No 53 0.87 Yes 0 0 No -23 0.68 Yes 11 37.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37087292 + NM_000249 MLH1 0 . . . 1.74 73.16 25 5.99 Yes 1 0.4 No 0 0 No -24 0.93 Yes 47 74.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69040741 + NM_133509 RAD51B 0 . . . 3.84 74.34 24 7.4 Yes 3 0.4 No 0 0 No -23 0.81 Yes 16 76.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94164497 - NM_005591 MRE11 0 . . . 5.21 67.12 22 5.29 No 73 0.1 No 0 0 No -21 0.46 No 37 88.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23629697 - NM_024675 PALB2 0 . . . 3.77 76.47 32 6.08 Yes 13 0.65 No 0 0 No -21 0.67 Yes 45 84.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69129479 + NM_133509 RAD51B 0 . . . 5.06 78.03 25 5.39 No 12 1.77 Yes 0 0 No -25 0.56 No 46 88.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69147263 + NM_133509 RAD51B 0 . . . 1.66 72.81 36 5.82 Yes 43 0.24 No 0 0 No -35 0.68 Yes 44 35.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33424910 - NM_002878 RAD51D 0 . . . 8.7 83.65 28 5.79 Yes 8 0.79 Yes 0 0 No -27 0.73 Yes 50 92.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59863474 - NM_032043 BRIP1 0 . . . 6.11 84.97 30 7.21 Yes 69 2.81 Yes 0 0 No -29 0.55 No 53 28.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37051645 + NM_000249 MLH1 0 . . . 2.3 84.41 15 5.37 No 27 0.6 No 0 0 No -58 0.45 No 31 86.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68868728 + NM_133509 RAD51B 0 . . . 3.67 68.07 13 5.57 Yes 60 1.16 Yes 0 0 No -58 0.72 Yes 45 63.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215618695 - NM_000465 BARD1 0 . . . 4.06 69.07 28 4.67 No 18 1.09 Yes 0 0 No -21 0.68 Yes 40 66.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68959511 + NM_133509 RAD51B 0 . . . 10.68 93.99 16 4.69 No 13 0.42 No 0 0 No -20 0.75 Yes 45 73.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68409690 + NM_133509 RAD51B 0 . . . 5.78 85.09 24 6.88 Yes 52 -0.74 No 0 0 No -32 0.5 No 23 70.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47717332 + NM_000251 MSH2 0 . . . 1.23 0 29 5.91 Yes 61 -3.22 No 0 0 No -50 0.91 Yes 51 62.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68903139 + NM_133509 RAD51B 0 . . . 3.95 71.97 25 5.1 No 60 1.05 Yes 0 0 No -24 0.82 Yes 49 57.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190684508 + NM_000534 PMS1 0 . . . 5.84 81.47 28 5.29 No 76 0.78 Yes 0 0 No -27 0.73 Yes 37 88.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105190953 + NM_021930 RINT1 0 . . . 1.67 68.77 18 7 Yes -2 0.84 Yes 0 0 No -30 0.4 No 53 18.48 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37085111 + NM_000249 MLH1 0 . . . 1.13 69.23 24 4.79 No 26 1.45 Yes 0 0 No -23 0.92 Yes 63 38.14 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68335143 + NM_133509 RAD51B 0 . . . 2.31 70.5 15 4.95 No 67 0.62 No 0 0 No -26 0.59 No 42 60.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47803751 + NM_000251 MSH2 0 . . . 0.64 0 10 4 No 1 0.66 No 0 0 No -24 0.51 No 51 52.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47674720 + NM_000251 MSH2 0 . . . 2.42 83.33 27 4 No 3 0.82 Yes 0 0 No -26 0.89 Yes 50 88.61 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr9 21985594 - NM_000077 CDKN2A 0 . . . 3.82 71.87 27 6.25 Yes 72 0.7 No 0 0 No -22 0.73 Yes 44 56.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190724913 + NM_000534 PMS1 0 . . . 0.35 53.38 50 7.56 Yes 41 0.6 No 0 0 No -25 0.75 Yes 12 43.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68811729 + NM_004360 CDH1 0 . . . 6.87 91.96 27 6.58 Yes 52 1.47 Yes 0 0 No -26 0.72 Yes 49 87.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59762969 - NM_032043 BRIP1 0 . . . 3 71.24 35 6.75 Yes 9 1.9 Yes 0 0 No -34 0.78 Yes 49 86.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68808453 + NM_133509 RAD51B 0 . . . 4.74 76.57 15 4.58 No 16 0.12 No 0 0 No -57 0.5 No 39 64.42 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69014381 + NM_133509 RAD51B 0 . . . 2.41 0 12 4.24 No 58 -0.63 No 0 0 No -34 0.93 Yes 37 28.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47723639 + NM_000251 MSH2 0 . . . 3.35 72.21 34 7.69 Yes 45 0.51 No 0 0 No -33 0.75 Yes 41 40.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84395977 - NM_139076 FAM175A 0 . . . 1.53 75.67 28 5.83 Yes 76 -3.73 No 0 0 No -27 0.56 No 49 90.58 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59858927 - NM_032043 BRIP1 0 . . . 0.38 65.27 17 3.88 No 40 1.21 Yes 0 0 No -23 0.51 No 36 46.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6034800 - NM_000535 PMS2 0 . . . 1.33 74.68 25 4.92 No 21 0.57 No 0 0 No -27 0.52 No 37 82.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68986184 + NM_133509 RAD51B 0 . . . 0.77 71.72 24 4.45 No 6 0.35 No 0 0 No -23 0.59 No 52 68.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69111649 + NM_133509 RAD51B 0 . . . 0.66 76.05 27 5.66 Yes 25 0.39 No 0 0 No -26 0.78 Yes 37 57.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21987467 - NM_000077 CDKN2A 0 . . . 10.28 94.79 18 5.21 No 76 -2.14 No 0 0 No -36 0.57 No 46 75.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29123975 - NM_001005735 CHEK2 0 . . . 1.79 71.64 36 5.85 Yes 47 0.89 Yes 0 0 No -36 0.58 No 48 55.57 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68624586 + NM_133509 RAD51B 0 . . . 0.23 78.41 15 4.58 No 64 -4.67 No 0 0 No -23 0.63 No 51 65.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68978473 + NM_133509 RAD51B 0 . . . 8.11 92.08 29 5.95 Yes 68 -4.68 No 0 0 No -28 0.44 No 44 66.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48023390 + NM_000179 MSH6 0 . . . 0.93 0 41 7.08 Yes 10 -2.61 No 0 0 No -24 0.57 No 57 56.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108160715 + NM_000051 ATM 0 . . . 3.91 62.6 17 4.72 No 45 1.31 Yes 0 0 No -20 0.92 Yes 38 86.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59760082 - NM_032043 BRIP1 0 . . . 4.74 72.21 29 4.45 No 68 0.31 No 0 0 No -28 0.78 Yes 51 85.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32902000 + NM_000059 BRCA2 0 . . . 2.72 85.66 14 4 No 9 0.39 No 0 0 No -28 0.79 Yes 49 84.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68670102 + NM_133509 RAD51B 0 . . . 3.67 87.84 29 5.74 Yes 73 0.18 No 0 0 No -28 0.87 Yes 40 68.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152341635 - NM_005431 XRCC2 0 . . . 1.79 69.89 28 5.34 No -4 0.02 No 0 0 No -22 0.56 No 52 66.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59915806 - NM_032043 BRIP1 0 . . . 5.99 84.22 21 4.8 No 33 1.06 Yes 0 0 No -20 0.89 Yes 50 94.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68794047 + NM_004360 CDH1 0 . . . 9.59 91.39 16 5.43 No 29 0.51 No 0 0 No -23 0.35 No 43 41.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131982106 + NM_005732 RAD50 0 . . . 4.86 83.4 36 6.28 Yes 60 0.88 Yes 0 0 No -26 0.57 No 41 79.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47708362 + NM_000251 MSH2 0 . . . 2.01 65.45 16 4.58 No 15 -2.67 No 0 0 No -23 0.79 Yes 43 49.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68909819 + NM_133509 RAD51B 0 . . . 6.45 75.84 18 5.97 Yes 16 0.41 No 0 0 No -31 0.43 No 41 87.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68395399 + NM_133509 RAD51B 0 . . . 1.91 59.59 23 5.39 No 76 -6.16 No 0 0 No -26 0.63 No 44 43.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41022437 + NM_001164269 RAD51 0 . . . 1.75 64.86 33 5.58 Yes 38 0.61 No 0 0 No -51 0.6 No 20 70.45 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89657828 + NM_000314 PTEN 0 . . . 7.14 71.88 15 5.36 No 43 0.22 No 0 0 No -26 0.76 Yes 38 69.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90990626 - NM_002485 NBN 0 . . . 1.31 0 43 8.58 Yes 4 0.25 No 0 0 No -30 0.45 No 54 53.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68611250 + NM_133509 RAD51B 0 . . . 5.48 81.83 32 6.54 Yes 10 1 Yes 0 0 No -31 0.72 Yes 48 98.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47714533 + NM_000251 MSH2 0 . . . 2.37 78.89 32 5.57 Yes 42 0.54 No 0 0 No -27 0.66 No 47 63.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68444788 + NM_133509 RAD51B 0 . . . 8.12 83.43 28 5.06 No 2 0.86 Yes 0 0 No -27 0.52 No 42 55.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108222215 + NM_000051 ATM 0 . . . 0.67 70.54 35 6.4 Yes -1 0.57 No 0 0 No -34 0.75 Yes 24 77.75 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37094167 + NM_000249 MLH1 0 . . . 1.87 77.54 36 5.41 No 0 0.57 No 0 0 No -30 0.64 No 47 95.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75516045 - NM_001040108 MLH3 0 . . . 1.04 63.95 25 5.24 No -2 0.93 Yes 0 0 No -24 0.74 Yes 60 55.89 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68755624 + NM_133509 RAD51B 0 . . . 1.96 81.81 11 4.8 No 32 0.51 No 0 0 No -25 0.68 Yes 43 88.26 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105193283 + NM_021930 RINT1 0 . . . 1.92 71.29 23 5.15 No 12 -0.78 No 0 0 No -44 0.34 No 48 62.99 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68521097 + NM_133509 RAD51B 0 . . . 1.1 0 14 7.69 Yes 12 1.36 Yes 0 0 No -20 0.64 No 46 70.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33448213 - NM_002878 RAD51D 0 . . . 2.7 75.51 60 6.02 Yes 41 -1.64 No 0 0 No -30 0.39 No 49 38.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94220125 - NM_005591 MRE11 0 . . . 0.9 70.86 18 4.58 No 27 0.93 Yes 0 0 No -47 0.51 No 39 43.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68781687 + NM_004360 CDH1 0 . . . 6.85 78 18 5.32 No 71 0.17 No 0 0 No -29 0.49 No 32 82.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108144231 + NM_000051 ATM 0 . . . 2.06 68.84 23 5.83 Yes 72 0.14 No 0 0 No -22 0.78 Yes 48 70.45 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6030289 - NM_000535 PMS2 0 . . . 3.76 74.16 65 8.25 Yes 65 1.13 Yes 0 0 No -32 0.47 No 49 59.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69021436 + NM_133509 RAD51B 0 . . . 4.19 68.35 27 5.53 No 47 1.38 Yes 0 0 No -26 0.54 No 26 90.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90954468 - NM_002485 NBN 0 . . . 0.42 70.71 19 4.9 No 70 0.67 No 0 0 No -17 0.56 No 48 61.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69021494 + NM_133509 RAD51B 0 . . . 0.4 67.23 29 5.54 No 42 0.94 Yes 0 0 No -28 0.61 No 16 50.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69083106 + NM_133509 RAD51B 0 . . . 5.47 79.58 23 5 No 57 1.19 Yes 0 0 No -22 0.73 Yes 45 69.42 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47693262 + NM_000251 MSH2 0 . . . 5.05 80.35 23 5 No 65 1.57 Yes 0 0 No -22 0.89 Yes 50 77.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94164886 - NM_005591 MRE11 0 . . . 5.16 80.67 18 4.9 No 76 0.84 Yes 0 0 No -26 0.37 No 41 78.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68769577 + NM_004360 CDH1 0 . . . 3.01 0 27 6.2 Yes 47 0.86 Yes 0 0 No -26 0.71 Yes 40 83.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215606442 - NM_000465 BARD1 0 . . . 10.99 94.39 17 4.8 No 3 0.04 No 0 0 No -28 0.8 Yes 45 72.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56772020 + NM_058216 RAD51C 0 . . . 2.24 80.12 56 7.09 Yes 7 1.16 Yes 0 0 No -32 0.54 No 51 76.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69064293 + NM_133509 RAD51B 0 . . . 2.05 76.63 36 4.57 No 47 -2.63 No 0 0 No -30 0.82 Yes 45 35.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48032846 + NM_000179 MSH6 0 . . . 1.66 62.12 16 4.67 No 53 -4.69 No 0 0 No -14 0.44 No 41 57.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47662143 + NM_000251 MSH2 0 . . . 1.03 68.2 37 4.22 No 33 0.93 Yes 0 0 No -32 0.54 No 25 85.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105209103 + NM_021930 RINT1 0 . . . 6.93 75.74 16 6.37 Yes 26 1.01 Yes 0 0 No -29 0.36 No 37 63.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68744160 + NM_133509 RAD51B 0 . . . 7.28 87.45 15 4.46 No 49 0.94 Yes 0 0 No -39 0.66 No 26 78.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59911795 - NM_032043 BRIP1 0 . . . 5.53 78.34 27 5.58 Yes 4 0.34 No 0 0 No -26 0.62 No 37 58.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90969036 - NM_002485 NBN 0 . . . 1.03 70.18 33 6.26 Yes 73 0.27 No 0 0 No -23 0.67 Yes 50 93.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94174543 - NM_005591 MRE11 0 . . . 2.19 0 26 5.98 Yes 12 1.16 Yes 0 0 No -22 0.51 No 46 96.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190685564 + NM_000534 PMS1 0 . . . 0.14 79.08 48 6.68 Yes 27 0.79 Yes 0 0 No -47 0.76 Yes 44 83.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69038204 + NM_133509 RAD51B 0 . . . 12.45 90.9 16 3.79 No 12 1.27 Yes 0 0 No -46 0.34 No 46 86.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108154992 + NM_000051 ATM 0 . . . 0.72 64.59 21 5.2 No 56 1.08 Yes 0 0 No -20 0.84 Yes 41 66.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131927418 + NM_005732 RAD50 0 . . . 1.05 72.61 30 5.48 No 70 -2.01 No 0 0 No -29 0.74 Yes 47 47.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69099084 + NM_133509 RAD51B 0 . . . 1.07 0 26 5.09 No 53 1.33 Yes 0 0 No -22 0.33 No 52 94.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69051091 + NM_133509 RAD51B 0 . . . 7.33 75.97 25 5.48 No 14 1.63 Yes 0 0 No -24 0.53 No 44 88.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69070809 + NM_133509 RAD51B 0 . . . 0.17 58.92 20 4.9 No 57 1.49 Yes 0 0 No -19 0.75 Yes 47 41.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68317705 + NM_133509 RAD51B 0 . . . 1.9 78.01 30 5.06 No 24 1.13 Yes 0 0 No -30 0.7 Yes 22 69.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90963375 - NM_002485 NBN 0 . . . 4.03 84.24 36 6.78 Yes 5 1.16 Yes 0 0 No -31 0.38 No 53 69.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89691192 + NM_000314 PTEN 0 . . . 1.53 83.28 28 5.2 No 4 0.94 Yes 0 0 No -27 0.36 No 53 62.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68988478 + NM_133509 RAD51B 0 . . . 5.85 82.48 22 7.28 Yes -3 0.34 No 0 0 No -21 0.9 Yes 33 82.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68768749 + NM_133509 RAD51B 0 . . . 0.04 60.7 23 4.87 No 59 -5.31 No 0 0 No -23 0.3 No 42 32.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68849016 + NM_004360 CDH1 0 . . . 0.59 79.83 21 5.85 Yes 54 0.47 No 0 0 No -49 0.65 No 36 43.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68878278 + NM_133509 RAD51B 0 . . . 3.71 76.16 23 5.38 No -3 0.82 Yes 0 0 No -26 0.73 Yes 48 73.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68570332 + NM_133509 RAD51B 0 . . . 8.76 83.1 24 5.19 No 28 1.28 Yes 0 0 No -23 0.85 Yes 36 58.67 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59767976 - NM_032043 BRIP1 0 . . . 4.91 65.96 24 5.87 Yes 19 0.56 No 0 0 No -23 0.83 Yes 40 50.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68454283 + NM_133509 RAD51B 0 . . . 0.45 73.29 36 6.21 Yes 66 1.15 Yes 0 0 No -17 0.39 No 45 87.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68778585 + NM_004360 CDH1 0 . . . 0.55 0 23 5.87 Yes 27 -3.01 No 0 0 No -25 0.9 Yes 47 43.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152358388 - NM_005431 XRCC2 0 . . . 4.96 64.57 24 5.29 No 65 -3.11 No 0 0 No -30 0.47 No 43 79.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37043473 + NM_000249 MLH1 0 . . . 1.86 84.41 10 4.78 No 26 1.89 Yes 0 0 No -52 0.56 No 32 92.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59871960 - NM_032043 BRIP1 0 . . . 6.29 87.34 35 8.18 Yes 70 -2.4 No 0 0 No -34 0.88 Yes 49 55.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131910954 + NM_005732 RAD50 0 . . . 3.48 76.04 28 5.39 No 73 -6.32 No 0 0 No -27 0.8 Yes 53 42.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105186272 + NM_021930 RINT1 0 . . . 2.3 83.69 18 5.29 No 55 1.42 Yes 0 0 No -23 0.65 No 46 70.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190717162 + NM_000534 PMS1 0 . . . 6.57 80.36 22 5.19 No 69 0.57 No 0 0 No -22 0.56 No 37 40.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33440554 - NM_002878 RAD51D 0 . . . 0.85 74.47 22 4.66 No 4 0.1 No 0 0 No -45 0.7 Yes 54 84.81 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68864156 + NM_004360 CDH1 0 . . . 1.1 70.09 17 5.25 No 66 1.98 Yes 0 0 No -61 0.27 No 52 60.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47753843 + NM_000251 MSH2 0 . . . 4 81.86 36 9.08 Yes 15 0.09 No 0 0 No -35 0.79 Yes 50 42.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68479754 + NM_133509 RAD51B 0 . . . 2.49 78.3 25 3.89 No 55 0.87 Yes 0 0 No -46 0.61 No 52 87.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59916252 - NM_032043 BRIP1 0 . . . 0.46 79.12 38 6.92 Yes 6 0.41 No 0 0 No -37 0.87 Yes 37 74.6 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68317187 + NM_133509 RAD51B 0 . . . 5.76 84.87 43 6.81 Yes 48 -1.15 No 0 0 No -42 0.54 No 47 71.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68861233 + NM_133509 RAD51B 0 . . . 7.54 91.06 40 5.02 No 59 1.93 Yes 0 0 No -26 0.81 Yes 53 62.57 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108225963 + NM_000051 ATM 0 . . . 11.03 92.78 37 4.59 No 29 -1.67 No 0 0 No -29 0.68 Yes 47 88.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47672446 + NM_000251 MSH2 0 . . . 5.56 84.04 26 5.2 No 29 0.65 No 0 0 No -23 0.61 No 44 48.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59930467 - NM_032043 BRIP1 0 . . . 3.53 70.33 21 4.47 No 53 0.04 No 0 0 No -20 0.73 Yes 22 77.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68423262 + NM_133509 RAD51B 0 . . . 3.16 70.03 47 5.53 No 45 -2.27 No 0 0 No -25 0.93 Yes 37 27.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47795100 + NM_000251 MSH2 0 . . . 1.22 67.51 18 6.78 Yes 45 1.47 Yes 0 0 No -26 0.67 Yes 13 39.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68621188 + NM_133509 RAD51B 0 . . . 2.68 0 17 5.39 No 12 0.62 No 0 0 No -8 0.61 No 46 80.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1227098 + NM_000455 STK11 0 . . . 4.04 72.67 18 4.9 No 70 -4.46 No 0 0 No -22 0.62 No 47 60.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75498322 - NM_001040108 MLH3 0 . . . 3.93 79.24 16 5.09 No 35 1.1 Yes 0 0 No -20 0.5 No 23 59.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59785851 - NM_032043 BRIP1 0 . . . 7.09 85.14 19 4.79 No 26 -1.11 No 0 0 No -18 0.41 No 46 77.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59808438 - NM_032043 BRIP1 0 . . . 8.12 85.05 23 5.78 Yes 25 0.92 Yes 0 0 No -22 0.75 Yes 50 64.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68494948 + NM_133509 RAD51B 0 . . . 7.22 80.53 80 8.66 Yes 43 0.87 Yes 0 0 No -31 0.54 No 15 71.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47711160 + NM_000251 MSH2 0 . . . 5.15 77.83 68 8.17 Yes -1 0.83 Yes 0 0 No -22 0.47 No 44 68.58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59756274 - NM_032043 BRIP1 0 . . . 10.48 84.41 14 4.87 No 64 0.38 No 0 0 No -43 0.53 No 35 40.25 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68868596 + NM_133509 RAD51B 0 . . . 1.69 59.48 25 5.57 Yes 72 0.5 No 0 0 No -24 0.59 No 35 83.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75508910 - NM_001040108 MLH3 0 . . . 1.92 68.29 18 4.69 No 73 -5.73 No 0 0 No -17 0.9 Yes 47 45.63 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68802895 + NM_004360 CDH1 0 . . . 0.52 0 26 5.39 No 46 1.61 Yes 0 0 No -25 0.83 Yes 12 82.96 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59919395 - NM_032043 BRIP1 0 . . . 3.93 68.5 14 4.47 No 50 0.66 No 0 0 No -22 0.79 Yes 31 84.84 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59938468 - NM_032043 BRIP1 0 . . . 4.1 74.25 25 5.1 No 14 1.58 Yes 0 0 No -24 0.9 Yes 44 87.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1210393 + NM_000455 STK11 0 . . . 5.14 78.06 23 4.5 No 52 0.76 No 0 0 No -23 0.72 Yes 52 54.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94210734 - NM_005591 MRE11 0 . . . 0.1 0 36 6.31 Yes 76 1.32 Yes 0 0 No -31 0.42 No 49 41.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59820382 - NM_032043 BRIP1 0 . . . 2.83 59.33 14 4.47 No 19 0.12 No 0 0 No -45 0.27 No 39 57.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108170126 + NM_000051 ATM 0 . . . 2.53 68.36 35 4.75 No 16 1.1 Yes 0 0 No -29 0.49 No 42 92.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94215936 - NM_005591 MRE11 0 . . . 6.5 76.98 19 4.72 No 8 0.99 Yes 0 0 No -23 0.54 No 50 84.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68695652 + NM_133509 RAD51B 0 . . . 2.86 85.73 32 7.06 Yes -2 1.1 Yes 0 0 No -22 0.49 No 52 46.4 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69052805 + NM_133509 RAD51B 0 . . . 6.28 72.92 23 5.2 No 6 1.54 Yes 0 0 No -22 0.91 Yes 41 71.12 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47687008 + NM_000251 MSH2 0 . . . 0.98 67.58 28 5.35 No 62 1.56 Yes 0 0 No -27 0.43 No 50 23.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215596046 - NM_000465 BARD1 0 . . . 8.62 83.3 36 5.91 Yes 42 1.6 Yes 0 0 No -28 0.65 No 49 57.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89718231 + NM_000314 PTEN 0 . . . 0.98 68.06 15 4.58 No 25 -1.87 No 0 0 No -20 0.66 No 48 54.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29135093 - NM_001005735 CHEK2 0 . . . 5.2 85.02 17 6.4 Yes 5 1.09 Yes 0 0 No -34 0.45 No 48 70.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131966455 + NM_005732 RAD50 0 . . . 1.64 62.82 74 8.66 Yes 62 -2.87 No 0 0 No -28 0.6 No 48 63.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68949961 + NM_133509 RAD51B 0 . . . 2.78 76.45 26 3.64 No 41 -2.74 No 0 0 No -20 0.74 Yes 44 69.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68636505 + NM_133509 RAD51B 0 . . . 3.88 69.52 36 7.45 Yes 8 0.9 Yes 0 0 No -35 0.92 Yes 45 56.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105184983 + NM_021930 RINT1 0 . . . 1.55 66.46 20 5.74 Yes 16 0.95 Yes 0 0 No -19 0.43 No 42 88.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68780165 + NM_133509 RAD51B 0 . . . 4.21 64.66 24 4.96 No 34 1.07 Yes 0 0 No -27 0.5 No 53 83.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59836802 - NM_032043 BRIP1 0 . . . 11.2 90.44 27 4.53 No 61 0.18 No 0 0 No -27 0.29 No 46 86.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68550252 + NM_133509 RAD51B 0 . . . 3.48 73.87 28 5.2 No 4 1.2 Yes 0 0 No -27 0.74 Yes 48 56.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47779102 + NM_000251 MSH2 0 . . . 4.04 78.74 24 8.1 Yes 68 -4.49 No 0 0 No -23 0.55 No 28 31.94 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68593820 + NM_133509 RAD51B 0 . . . 4.82 71.22 13 5 No 2 0.31 No 0 0 No -40 0.46 No 25 73.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68415987 + NM_133509 RAD51B 0 . . . 2.04 63.13 25 5 No 19 0.77 No 0 0 No -24 0.71 Yes 39 98.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94189225 - NM_005591 MRE11 0 . . . 3.81 62.71 72 9.17 Yes 32 1.55 Yes 0 0 No -30 0.56 No 26 97.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190721318 + NM_000534 PMS1 0 . . . 0.23 66.66 24 4.7 No 26 0.83 Yes 0 0 No -21 0.79 Yes 21 37.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68856352 + NM_004360 CDH1 0 . . . 0.75 68.77 17 5.11 No 68 0.04 No 0 0 No -55 0.38 No 53 20.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68564141 + NM_133509 RAD51B 0 . . . 5.54 76.27 14 4 No 25 1.63 Yes 0 0 No -32 0.57 No 33 90.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68419258 + NM_133509 RAD51B 0 . . . 1.29 65.57 10 2.67 No 15 1.19 Yes 0 0 No -23 0.66 No 43 65.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68859424 + NM_004360 CDH1 0 . . . 6.61 88.74 21 4.9 No 44 1.15 Yes 0 0 No -20 0.78 Yes 46 48.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47669866 + NM_000251 MSH2 0 . . . 6.7 81.05 12 5.1 No 43 -1.73 No 0 0 No -27 0.48 No 47 62.04 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152345383 - NM_005431 XRCC2 0 . . . 2.07 0 18 4.04 No 11 0.75 No 0 0 No -24 0.87 Yes 42 82.8 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23631701 - NM_024675 PALB2 0 . . . 6.14 67.74 31 6.08 Yes 17 0.89 Yes 0 0 No -35 0.45 No 41 96.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68946200 + NM_133509 RAD51B 0 . . . 3.7 79.04 47 7.08 Yes 28 1.09 Yes 0 0 No -46 0.57 No 22 61.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23642238 - NM_024675 PALB2 0 . . . 2.89 82.03 31 6.61 Yes 2 1.43 Yes 0 0 No -25 0.76 Yes 17 60.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47697272 + NM_000251 MSH2 0 . . . 3.56 85.09 26 8.06 Yes 33 1.24 Yes 0 0 No -26 0.76 Yes 50 66.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56779437 + NM_058216 RAD51C 0 . . . 3.91 83.3 20 5.66 Yes 38 0.21 No 0 0 No -29 0.65 No 44 84.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68793729 + NM_133509 RAD51B 0 . . . 0.63 73.47 57 8.44 Yes 38 0.18 No 0 0 No -27 0.6 No 15 49.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41248476 - NM_007294 BRCA1 0 . . . 1.91 61.65 19 5 No 45 1.14 Yes 0 0 No -22 0.77 Yes 38 75.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59797083 - NM_032043 BRIP1 0 . . . 1.97 83.13 62 8.82 Yes 9 1.91 Yes 0 0 No -57 0.52 No 49 83.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68934529 + NM_133509 RAD51B 0 . . . 3.13 77.39 30 5.66 Yes 20 0.58 No 0 0 No -29 0.95 Yes 47 59.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69073132 + NM_133509 RAD51B 0 . . . 2.85 70.85 55 7.66 Yes NA NA NA 0 0 No -23 0.89 Yes 49 30.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6041621 - NM_000535 PMS2 0 . . . 2.51 82.29 39 7.07 Yes 76 -2.95 No 0 0 No -38 0.37 No 35 51.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75512715 - NM_001040108 MLH3 0 . . . 3.47 84.37 27 5.38 No 8 0.8 Yes 0 0 No -24 0.62 No 45 65.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59892762 - NM_032043 BRIP1 0 . . . 0.92 63.74 29 4.45 No 7 0.09 No 0 0 No -22 0.5 No 28 71.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190679483 + NM_000534 PMS1 0 . . . 0.26 0 31 5.62 Yes 76 1.09 Yes 0 0 No -25 0.61 No 55 33.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68622172 + NM_133509 RAD51B 0 . . . 2.89 68.34 19 6.53 Yes 16 0.74 No 0 0 No -14 0.23 No 42 93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89694815 + NM_000314 PTEN 0 . . . 2.53 62.94 37 5.92 Yes 60 -2.72 No 0 0 No -20 0.55 No 47 23.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215645220 - NM_000465 BARD1 0 . . . 3.23 88.08 15 4.19 No 41 -1.47 No 0 0 No -25 0.58 No 52 56.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215625871 - NM_000465 BARD1 0 . . . 0.87 0 20 7.14 Yes 54 0.72 No 0 0 No -19 0.76 Yes 26 93.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190678063 + NM_000534 PMS1 0 . . . 0.26 77.23 32 5.88 Yes 74 -6.26 No 0 0 No -31 0.51 No 43 77.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68684002 + NM_133509 RAD51B 0 . . . 6 85.7 23 5.39 No 10 0.54 No 0 0 No -56 0.42 No 48 85.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94189292 - NM_005591 MRE11 0 . . . 7.98 80.92 26 5.48 No 70 -4.76 No 0 0 No -25 0.89 Yes 43 87.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68843753 + NM_004360 CDH1 0 . . . 2.73 68.13 15 5 No 1 0.11 No 0 0 No -24 0.45 No 49 80.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108095451 + NM_000051 ATM 0 . . . 6.82 81.34 20 5.11 No 24 -3.57 No 0 0 No -33 0.38 No 50 71.9 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68559098 + NM_133509 RAD51B 0 . . . 4.06 77.41 20 5.1 No 56 0.64 No 0 0 No -58 0.28 No 36 69.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131966034 + NM_005732 RAD50 0 . . . 1.91 70.88 17 6.07 Yes 58 0.96 Yes 0 0 No -16 0.54 No 45 25.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47663429 + NM_000251 MSH2 0 . . . 0.81 70.11 39 5.72 Yes 49 0.64 No 0 0 No -32 0.45 No 45 50.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131956348 + NM_005732 RAD50 0 . . . 5.69 80.07 24 6.08 Yes 21 1.6 Yes 0 0 No -23 0.65 No 37 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68894487 + NM_133509 RAD51B 0 . . . 2.22 81.76 20 4.47 No 69 0.49 No 0 0 No -19 0.55 No 50 59.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68905760 + NM_133509 RAD51B 0 . . . 5.56 81.67 27 5.57 Yes 31 0.87 Yes 0 0 No -27 0.74 Yes 27 84.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68792178 + NM_133509 RAD51B 0 . . . 9.16 93.95 39 6.81 Yes 24 0.73 No 0 0 No -32 0.86 Yes 34 75.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104177221 - NM_001100119 XRCC3 0 . . . 5.52 81.82 34 5.18 No 53 1.36 Yes 0 0 No -29 0.86 Yes 37 65.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68803847 + NM_004360 CDH1 0 . . . 2.41 68.34 12 5.24 No 13 0.67 No 0 0 No -29 0.92 Yes 42 64.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68430720 + NM_133509 RAD51B 0 . . . 2.99 74.39 20 4.79 No 40 1.66 Yes 0 0 No -19 0.68 Yes 45 73.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47686916 + NM_000251 MSH2 0 . . . 0.7 73.67 25 5.88 Yes 32 1.03 Yes 0 0 No -24 0.57 No 15 70.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59890491 - NM_032043 BRIP1 0 . . . 5.29 71.44 14 4.91 No 62 0.69 No 0 0 No -27 0.5 No 29 88.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131916917 + NM_005732 RAD50 0 . . . 2.82 0 28 6.38 Yes 39 1.11 Yes 0 0 No -22 0.58 No 19 39.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32949878 + NM_000059 BRCA2 0 . . . 3.45 85.02 28 5.37 No 3 1.16 Yes 0 0 No -53 0.46 No 41 52.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69010596 + NM_133509 RAD51B 0 . . . 9.24 76.53 19 5.57 Yes 1 1.31 Yes 0 0 No -24 0.77 Yes 44 71.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108160280 + NM_000051 ATM 0 . . . 3.37 79.56 27 6.23 Yes 72 0.66 No 0 0 No -26 0.88 Yes 52 46.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190662486 + NM_000534 PMS1 0 . . . 0.31 72.6 27 5.1 No 71 0.13 No 0 0 No -19 0.25 No 21 56.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75519993 - NM_001040108 MLH3 0 . . . 0.53 68.88 20 6 Yes 44 0.34 No 0 0 No -47 0.26 No 38 51.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37093440 + NM_000249 MLH1 0 . . . 0.38 72.7 23 4.8 No 70 -2.27 No 0 0 No -22 0.78 Yes 47 65.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32940892 + NM_000059 BRCA2 0 . . . 0.24 56.81 32 6 Yes 58 0.33 No 0 0 No -31 0.82 Yes 51 34.64 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68862861 + NM_133509 RAD51B 0 . . . 5.89 74.59 31 5.74 Yes 20 1.29 Yes 0 0 No -30 0.75 Yes 38 85.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75488100 - NM_001040108 MLH3 0 . . . 2.87 79.06 16 3.7 No 66 0.64 No 0 0 No -41 0.48 No 46 47.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90995753 - NM_002485 NBN 0 . . . 2.64 75.53 24 5.26 No -3 0.39 No 0 0 No -21 0.77 Yes 40 96.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47649909 + NM_000251 MSH2 0 . . . 5.57 80.17 37 6.45 Yes -4 0.79 Yes 0 0 No -36 0.93 Yes 50 47.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108236801 + NM_000051 ATM 0 . . . 3.56 75.18 10 4 No 54 0.11 No 0 0 No -28 0.62 No 43 36.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59903822 - NM_032043 BRIP1 0 . . . 8.99 81.67 22 5.98 Yes 38 -2.52 No 0 0 No -29 0.51 No 46 81.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37046385 + NM_000249 MLH1 0 . . . 4.27 67.46 35 5.69 Yes 55 0.96 Yes 0 0 No -27 0.42 No 46 74.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21976802 - NM_000077 CDKN2A 0 . . . 2.9 78.73 55 5.38 No 3 0.99 Yes 0 0 No -20 0.58 No 44 73.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41269770 - NM_007294 BRCA1 0 . . . 5.65 82.66 34 6.77 Yes 5 0.95 Yes 0 0 No -33 0.66 No 45 63.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94161094 - NM_005591 MRE11 0 . . . 5.21 82.22 42 6.51 Yes -2 1.43 Yes 0 0 No -41 0.84 Yes 45 91.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47700530 + NM_000251 MSH2 0 . . . 4.44 86.3 24 5.76 Yes 5 1.42 Yes 0 0 No -23 0.81 Yes 49 83.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32962336 + NM_000059 BRCA2 0 . . . 0.55 0 15 5.16 No 38 1.46 Yes 0 0 No -21 0.76 Yes 53 60.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7568309 - NM_000546 TP53 0 . . . 0.52 75.84 30 5.63 Yes 34 -3.34 No 0 0 No -29 0.76 Yes 47 83.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59790685 - NM_032043 BRIP1 0 . . . 0.5 0 38 6.45 Yes 2 0.93 Yes 0 0 No -37 0.79 Yes 15 53.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56775453 + NM_058216 RAD51C 0 . . . 3.98 79.06 10 4 No 50 -0.25 No 0 0 No -42 0.57 No 44 74.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89728608 + NM_000314 PTEN 0 . . . 0.36 68.68 60 8.12 Yes 74 0.95 Yes 0 0 No -59 0.3 No 46 50.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84406524 - NM_139076 FAM175A 0 . . . 7.44 84.21 17 5.29 No 74 1.05 Yes 0 0 No -21 0.46 No 41 62.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6040036 - NM_000535 PMS2 0 . . . 0.51 64.12 52 7.08 Yes 75 -6.14 No 0 0 No -27 0.88 Yes 45 83.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29119897 - NM_001005735 CHEK2 0 . . . 6.42 89.36 52 6.92 Yes 72 2.1 Yes 0 0 No -28 0.87 Yes 20 75.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69085943 + NM_133509 RAD51B 0 . . . 0.09 74.68 82 9.31 Yes 4 0.41 No 0 0 No -27 0.94 Yes 54 71.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59863269 - NM_032043 BRIP1 0 . . . 3.15 71.96 18 8.19 Yes 60 1.79 Yes 0 0 No -26 0.69 Yes 24 92.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131934272 + NM_005732 RAD50 0 . . . 4.79 82.98 31 6.76 Yes 57 0.66 No 0 0 No -30 0.93 Yes 48 66.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68750009 + NM_133509 RAD51B 0 . . . 2.25 70.67 36 6.39 Yes 16 1.21 Yes 0 0 No -35 0.76 Yes 42 93.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68894958 + NM_133509 RAD51B 0 . . . 0.54 64.39 18 5.29 No 70 -6.06 No 0 0 No -25 0.61 No 38 79.16 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29133860 - NM_001005735 CHEK2 0 . . . 0.37 65.11 36 6.3 Yes 24 -2.33 No 0 0 No -33 0.71 Yes 48 38.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69100705 + NM_133509 RAD51B 0 . . . 6.11 79.34 27 6.63 Yes 75 -3.54 No 0 0 No -26 0.76 Yes 41 60.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69097985 + NM_133509 RAD51B 0 . . . 0.16 75.12 26 5 No 68 -2.61 No 0 0 No -25 0.88 Yes 47 66.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59878093 - NM_032043 BRIP1 0 . . . 6.1 82.15 18 5.85 Yes 24 1.53 Yes 0 0 No -28 0.7 Yes 46 96.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68697771 + NM_133509 RAD51B 0 . . . 0.42 54.45 25 5 No 4 0.67 No 0 0 No -24 0.83 Yes 54 34.14 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190648690 + NM_000534 PMS1 0 . . . 0.72 73.42 25 3.46 No 8 0.34 No 0 0 No -24 0.49 No 50 51.97 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69111072 + NM_133509 RAD51B 0 . . . 2.26 0 14 3.99 No 14 1.37 Yes 0 0 No -24 0.62 No 44 64.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47659449 + NM_000251 MSH2 0 . . . 2.39 0 20 4.9 No 31 0.57 No 0 0 No -19 0.57 No 34 76.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68429369 + NM_133509 RAD51B 0 . . . 0.49 59.58 158 8.66 Yes 75 -2.22 No 0 0 No -24 0.42 No 45 58.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1215222 + NM_000455 STK11 0 . . . 4.91 78.5 25 4.23 No 27 1.29 Yes 0 0 No -19 0.56 No 31 63.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32965066 + NM_000059 BRCA2 0 . . . 7.95 84.39 23 6.29 Yes 24 0.75 No 0 0 No -25 0.78 Yes 43 75.61 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68462864 + NM_133509 RAD51B 0 . . . 0.42 74.68 21 5.19 No 46 -3.87 No 0 0 No -20 0.83 Yes 46 79.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89727747 + NM_000314 PTEN 0 . . . 3.62 85.3 26 5.15 No 10 0.58 No 0 0 No -25 0.9 Yes 48 91.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108126254 + NM_000051 ATM 0 . . . 3.14 68.95 28 5.24 No 16 0.56 No 0 0 No -49 0.89 Yes 42 90.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68856735 + NM_004360 CDH1 0 . . . 4.55 74.06 68 7.28 Yes 36 -1.53 No 0 0 No -21 0.5 No 35 30.72 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190688747 + NM_000534 PMS1 0 . . . 4.04 75.17 28 5.39 No 74 0.98 Yes 0 0 No -27 0.74 Yes 46 29.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68878465 + NM_133509 RAD51B 0 . . . 4.34 78.41 20 5.83 Yes 46 -4.53 No 0 0 No -19 0.92 Yes 51 59.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68632019 + NM_133509 RAD51B 0 . . . 2 63.56 34 6.39 Yes 37 0.2 No 0 0 No -33 0.61 No 47 77.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68350071 + NM_133509 RAD51B 0 . . . 0.37 58.92 23 5 No 44 -3.69 No 0 0 No -22 0.44 No 44 19.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68338572 + NM_133509 RAD51B 0 . . . 5.25 72.9 26 6.93 Yes 64 -5.18 No 0 0 No -29 0.53 No 45 21.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190731313 + NM_000534 PMS1 0 . . . 2.5 68.22 21 5.31 No 15 1.61 Yes 0 0 No -20 0.9 Yes 43 94.44 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69147232 + NM_133509 RAD51B 0 . . . 0.24 0 24 4.7 No 60 0.58 No 0 0 No -23 0.71 Yes 46 33.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68694681 + NM_133509 RAD51B 0 . . . 1.74 75.17 37 6 Yes 32 0.52 No 0 0 No -29 0.44 No 48 50.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29112919 - NM_001005735 CHEK2 0 . . . 3.25 60.35 44 6.98 Yes 33 0.8 Yes 0 0 No -26 0.93 Yes 37 76.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41229263 - NM_007294 BRCA1 0 . . . 3.85 72.38 20 4.38 No 72 0.92 Yes 0 0 No -19 0.49 No 47 66.78 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68478590 + NM_133509 RAD51B 0 . . . 7.37 86.29 23 4.9 No 38 0.31 No 0 0 No -22 0.61 No 49 69.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29134264 - NM_001005735 CHEK2 0 . . . 2.93 70.46 30 6.17 Yes 60 -4.89 No 0 0 No -29 0.53 No 44 56.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32892697 + NM_000059 BRCA2 0 . . . 2.04 84.86 22 5.56 Yes 33 1.06 Yes 0 0 No -21 0.65 No 50 73.88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68885732 + NM_133509 RAD51B 0 . . . 2.01 78.87 11 4.98 No 65 0.36 No 0 0 No -46 0.63 No 50 48.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47805012 + NM_000251 MSH2 0 . . . 6.18 69.04 36 5.81 Yes 39 -1.45 No 0 0 No -25 0.5 No 49 89.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59770528 - NM_032043 BRIP1 0 . . . 5.59 77.32 27 4.16 No 20 1.04 Yes 0 0 No -27 0.55 No 38 81.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68513593 + NM_133509 RAD51B 0 . . . 0.29 0 36 6.26 Yes 69 1.36 Yes 0 0 No -35 0.53 No 44 59.56 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190697997 + NM_000534 PMS1 0 . . . 4.25 77.85 20 5.66 Yes 72 1.74 Yes 0 0 No -30 0.48 No 44 56.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89731476 + NM_000314 PTEN 0 . . . 0.42 81.78 24 5 No -4 0.17 No 0 0 No -21 0.49 No 45 74.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68330897 + NM_133509 RAD51B 0 . . . 3.9 79.26 11 5.1 No 17 1.16 Yes 0 0 No -21 0.27 No 41 48.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108129882 + NM_000051 ATM 0 . . . 1.79 74.46 17 5.29 No 28 0.75 No 0 0 No -21 0.47 No 30 92.92 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94206923 - NM_005591 MRE11 0 . . . 7.05 78.75 29 6.7 Yes 24 2.1 Yes 0 0 No -28 0.91 Yes 34 82.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131957671 + NM_005732 RAD50 0 . . . 6.21 79.69 19 5 No 18 1.58 Yes 0 0 No -24 0.78 Yes 40 94.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69031724 + NM_133509 RAD51B 0 . . . 5.68 73.54 15 4.58 No 18 1 Yes 0 0 No -14 0.4 No 22 32.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68936225 + NM_133509 RAD51B 0 . . . 1.31 70.89 22 5.19 No 12 0.37 No 0 0 No -22 0.44 No 46 90.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68758101 + NM_133509 RAD51B 0 . . . 4.38 85.02 57 7.26 Yes 7 1.43 Yes 0 0 No -29 0.62 No 51 76.31 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68433808 + NM_133509 RAD51B 0 . . . 2.08 73.86 57 7.25 Yes 69 -4.68 No 0 0 No -28 0.45 No 51 29.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47732670 + NM_000251 MSH2 0 . . . 6.53 82.45 62 7.36 Yes 9 0.76 No 0 0 No -24 0.9 Yes 43 86.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47782486 + NM_000251 MSH2 0 . . . 1.11 0 24 3.94 No 14 0.48 No 0 0 No -56 0.56 No 44 59.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152373910 - NM_005431 XRCC2 0 . . . 3.01 0 21 4.58 No 52 -1.62 No 0 0 No -20 0.69 Yes 35 74.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68848910 + NM_133509 RAD51B 0 . . . 4.07 79.39 29 7.26 Yes 44 1.67 Yes 0 0 No -28 0.95 Yes 35 47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69146796 + NM_133509 RAD51B 0 . . . 1.79 67.81 13 4.36 No 6 0.89 Yes 0 0 No -32 0.25 No 43 52.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68365784 + NM_133509 RAD51B 0 . . . 3.02 0 28 9.32 Yes 38 0.79 Yes 0 0 No -27 0.85 Yes 37 91.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29099780 - NM_001005735 CHEK2 0 . . . 0.17 48.54 23 5.17 No 58 -1.33 No 0 0 No -26 0.65 No 44 82.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68538252 + NM_133509 RAD51B 0 . . . 7.58 82.12 66 7.42 Yes 7 0.5 No 0 0 No -30 0.61 No 48 70.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41255605 - NM_007294 BRCA1 0 . . . 0.72 74.02 17 4.7 No 72 -6.2 No 0 0 No -26 0.48 No 46 70.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6032304 - NM_000535 PMS2 0 . . . 2.91 66.04 12 5.39 No 45 0.16 No 0 0 No -28 0.32 No 41 96.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68747205 + NM_133509 RAD51B 0 . . . 3.78 80.96 22 5.18 No 5 -0.6 No 0 0 No -22 0.45 No 41 85.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68401263 + NM_133509 RAD51B 0 . . . 8.88 88.11 18 4.9 No 68 0.09 No 0 0 No -28 0.38 No 49 63.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190664712 + NM_000534 PMS1 0 . . . 4.03 85.6 46 8.2 Yes 63 1.72 Yes 0 0 No -26 0.63 No 47 79.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105206534 + NM_021930 RINT1 0 . . . 2.11 63.64 28 4.65 No 61 -3.83 No 0 0 No -42 0.35 No 51 22.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47768426 + NM_000251 MSH2 0 . . . 5.76 76.36 15 5.74 Yes NA NA NA 0 0 No -54 0.29 No 50 42.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1226530 + NM_000455 STK11 0 . . . 0.35 67.2 18 4.14 No 39 -3.16 No 0 0 No -30 0.68 Yes 60 19.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47677940 + NM_000251 MSH2 0 . . . 1.19 72.62 21 5.09 No -4 0.73 No 0 0 No -20 0.7 Yes 49 70.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68803992 + NM_004360 CDH1 0 . . . 8.01 75.45 27 4.02 No 60 0.31 No 0 0 No -26 0.74 Yes 40 58.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47803695 + NM_000251 MSH2 0 . . . 0.14 65.92 13 4.36 No 52 0.54 No 0 0 No -42 0.39 No 37 44.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68819213 + NM_004360 CDH1 0 . . . 3.22 85.09 17 5.32 No 33 1.13 Yes 0 0 No -27 0.71 Yes 50 41.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68455253 + NM_133509 RAD51B 0 . . . 9.13 97.88 27 5.58 Yes 66 -3.21 No 0 0 No -26 0.61 No 47 57.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68330300 + NM_133509 RAD51B 0 . . . 1.1 0 24 4.81 No 65 1.11 Yes 0 0 No -24 0.59 No 37 72.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32968178 + NM_000059 BRCA2 0 . . . 2.57 75.87 21 3.53 No 54 1.15 Yes 0 0 No -23 0.53 No 31 87.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68805408 + NM_004360 CDH1 0 . . . 0.09 74.68 22 4.28 No 41 0.42 No 0 0 No -18 0.3 No 17 74.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68677842 + NM_133509 RAD51B 0 . . . 3.22 74.82 19 5.04 No 33 0.95 Yes 0 0 No -26 0.59 No 51 57.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108216615 + NM_000051 ATM 0 . . . 2.65 75.65 24 6.38 Yes 70 0.31 No 0 0 No -23 0.69 Yes 45 64.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41264244 - NM_007294 BRCA1 0 . . . 0.57 65.89 11 7.55 Yes 45 1.44 Yes 0 0 No -29 0.59 No 42 55.82 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84397465 - NM_139076 FAM175A 0 . . . 2.97 66.53 28 4.26 No 54 0.95 Yes 0 0 No -21 0.65 No 45 42.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68623476 + NM_133509 RAD51B 0 . . . 3.35 71.15 11 3.93 No 39 0.37 No 0 0 No -37 0.36 No 39 71.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68760032 + NM_133509 RAD51B 0 . . . 4.78 77.23 18 4.58 No 29 -2.33 No 0 0 No -24 0.43 No 48 55.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47662679 + NM_000251 MSH2 0 . . . 4.74 84.41 22 5.92 Yes 44 1.05 Yes 0 0 No -21 0.89 Yes 35 57.07 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47691465 + NM_000251 MSH2 0 . . . 1.42 71.6 84 9.75 Yes 63 1.46 Yes 0 0 No -44 0.53 No 54 49.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1223155 + NM_000455 STK11 0 . . . 4.76 84.8 13 4.36 No 5 0.56 No 0 0 No -51 0.64 No 50 67.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89622151 + NM_000314 PTEN 0 . . . 2.54 75.2 15 5.9 Yes 32 0.04 No 0 0 No -23 0.73 Yes 26 41.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94169974 - NM_005591 MRE11 0 . . . 4.2 58.98 30 5.49 No 10 0.17 No 0 0 No -26 0.62 No 35 62.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7574078 - NM_000546 TP53 0 . . . 6.11 88.13 17 4.05 No 11 0.9 Yes 0 0 No -24 0.65 No 46 62.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215660491 - NM_000465 BARD1 0 . . . 2.53 79.58 28 4.69 No 44 2.41 Yes 0 0 No -27 0.77 Yes 37 87.73 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59790164 - NM_032043 BRIP1 0 . . . 0.78 84.22 17 6.08 Yes 33 1.06 Yes 0 0 No -16 0.58 No 50 45.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68783542 + NM_133509 RAD51B 0 . . . 7.28 93.42 28 6.54 Yes 1 0.42 No 0 0 No -27 0.61 No 47 62.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90944380 - NM_002485 NBN 0 . . . 4.57 83.1 13 5.08 No 36 0.82 Yes 0 0 No -26 0.45 No 51 43.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108141541 + NM_000051 ATM 0 . . . 1.08 84.22 22 4.98 No 33 1.13 Yes 0 0 No -18 0.5 No 25 39.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68407332 + NM_133509 RAD51B 0 . . . 3.74 79.72 22 5.86 Yes 54 2.09 Yes 0 0 No -21 0.43 No 53 66.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69068339 + NM_133509 RAD51B 0 . . . 7.74 88.93 16 4.6 No 7 1 Yes 0 0 No -32 0.51 No 44 48.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68778581 + NM_133509 RAD51B 0 . . . 2.1 76.63 9 3.87 No 64 -4.26 No 0 0 No -28 0.35 No 43 47.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47756009 + NM_000251 MSH2 0 . . . 6.09 83.06 40 6 Yes 3 0.4 No 0 0 No -39 0.43 No 49 55.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131959991 + NM_005732 RAD50 0 . . . 0.41 75.7 24 4.42 No 61 0.91 Yes 0 0 No -23 0.24 No 46 50.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41275414 - NM_007294 BRCA1 0 . . . 0.17 72.62 18 5.74 Yes -4 0.66 No 0 0 No -20 0.5 No 48 44.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89658538 + NM_000314 PTEN 0 . . . 5.03 66.17 15 5.39 No 50 -1.31 No 0 0 No -24 0.31 No 44 77.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190699904 + NM_000534 PMS1 0 . . . 6.52 88.69 23 5 No 7 0.59 No 0 0 No -25 0.54 No 34 37.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68972813 + NM_133509 RAD51B 0 . . . 1.85 0 46 6.94 Yes 47 0.15 No 0 0 No -26 0.73 Yes 18 54.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190717248 + NM_000534 PMS1 0 . . . 0.2 72.75 35 6.74 Yes 21 -3.56 No 0 0 No -34 0.72 Yes 54 59.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68771203 + NM_133509 RAD51B 0 . . . 2.1 71.57 18 4.61 No 37 0.54 No 0 0 No -52 0.78 Yes 46 77.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68345939 + NM_133509 RAD51B 0 . . . 5.62 85.08 19 6.93 Yes 0 0.11 No 0 0 No -25 0.49 No 46 63.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215616190 - NM_000465 BARD1 0 . . . 0.36 67.27 21 4.84 No 70 -5.19 No 0 0 No -26 0.81 Yes 54 55.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45803405 - NM_001048171 MUTYH 0 . . . 6.66 85.05 16 5.28 No 8 1.2 Yes 0 0 No -21 0.79 Yes 50 67.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90972710 - NM_002485 NBN 0 . . . 0.69 83.39 21 5.74 Yes 10 0.91 Yes 0 0 No -20 0.9 Yes 48 95.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68766928 + NM_133509 RAD51B 0 . . . 6.39 88.6 17 5.74 Yes 14 2.01 Yes 0 0 No -24 0.68 Yes 44 85.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41262692 - NM_007294 BRCA1 0 . . . 5.46 79.79 25 5.41 No 2 1.1 Yes 0 0 No -24 0.74 Yes 48 79.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104178430 - NM_001100119 XRCC3 0 . . . 7.61 84.34 43 7.23 Yes 29 1.04 Yes 0 0 No -42 0.8 Yes 45 85.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68950107 + NM_133509 RAD51B 0 . . . 3.13 0 42 6.78 Yes 50 -3.56 No 0 0 No -25 0.35 No 51 62.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215669641 - NM_000465 BARD1 0 . . . 1.87 73.52 18 4.26 No 21 1.73 Yes 0 0 No -21 0.53 No 37 79.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23634566 - NM_024675 PALB2 0 . . . 0.9 0 15 4.54 No 71 -5.21 No 0 0 No -28 0.29 No 38 43.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68655996 + NM_133509 RAD51B 0 . . . 4.28 84.75 20 4.85 No 55 0.79 Yes 0 0 No -24 0.79 Yes 45 58.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131942579 + NM_005732 RAD50 0 . . . 4.9 72.12 33 5.17 No 64 -4.85 No 0 0 No -17 0.26 No 48 20.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131954275 + NM_005732 RAD50 0 . . . 8.69 87.28 21 5.1 No 27 1.45 Yes 0 0 No -20 0.73 Yes 47 58.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68948326 + NM_133509 RAD51B 0 . . . 5.05 82.88 16 5.83 Yes -2 0.98 Yes 0 0 No -21 0.48 No 41 74.37 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131981437 + NM_005732 RAD50 0 . . . 2.32 73.2 24 4.44 No 74 -6.08 No 0 0 No -23 0.74 Yes 46 48.81 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37039831 + NM_000249 MLH1 0 . . . 1.36 74.59 38 6.23 Yes 59 -4.52 No 0 0 No -38 0.57 No 41 60.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40989894 + NM_001164269 RAD51 0 . . . 5.47 85.37 29 6.47 Yes 76 1.48 Yes 0 0 No -28 0.9 Yes 50 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47741235 + NM_000251 MSH2 0 . . . 2.27 0 19 5.36 No 24 0.94 Yes 0 0 No -21 0.37 No 34 75.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32904769 + NM_000059 BRCA2 0 . . . 0.82 69.1 27 4.54 No 2 0.33 No 0 0 No -24 0.6 No 45 64.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131970239 + NM_005732 RAD50 0 . . . 1.74 0 38 5.39 No 34 1.51 Yes 0 0 No -28 0.59 No 24 91.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41241371 - NM_007294 BRCA1 0 . . . 4.19 77.97 49 6.75 Yes 13 0.11 No 0 0 No -35 0.64 No 45 83.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41250507 - NM_007294 BRCA1 0 . . . 0.89 77.71 20 3.59 No 62 0.64 No 0 0 No -19 0.94 Yes 52 79.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89725150 + NM_000314 PTEN 0 . . . 3.25 75.18 17 4.22 No -2 0.09 No 0 0 No -17 0.8 Yes 48 83.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68903778 + NM_133509 RAD51B 0 . . . 1.08 70.41 35 6.4 Yes 74 0.95 Yes 0 0 No -34 0.82 Yes 59 49.05 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33444860 - NM_002878 RAD51D 0 . . . 4.25 75.09 33 5.46 No 67 -4.4 No 0 0 No -25 0.51 No 53 83.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32943946 + NM_000059 BRCA2 0 . . . 5.92 82.31 16 4.69 No 67 1.2 Yes 0 0 No -23 0.71 Yes 31 71.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47736573 + NM_000251 MSH2 0 . . . 5.3 77.3 15 5.38 No 60 -3.62 No 0 0 No -30 0.49 No 43 78.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69055770 + NM_133509 RAD51B 0 . . . 0.09 0 21 5 No 24 0.95 Yes 0 0 No -20 0.73 Yes 53 64.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68356098 + NM_133509 RAD51B 0 . . . 7.01 83.43 46 7.21 Yes 48 -4.86 No 0 0 No -45 0.76 Yes 46 54.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68824482 + NM_004360 CDH1 0 . . . 2.3 82.65 34 7.61 Yes 27 0.52 No 0 0 No -33 0.64 No 49 72.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94213061 - NM_005591 MRE11 0 . . . 7.3 81.81 17 5.74 Yes 27 0.5 No 0 0 No -26 0.21 No 31 62.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41227538 - NM_007294 BRCA1 0 . . . 6.93 86.71 22 4.28 No 5 1.71 Yes 0 0 No -23 0.65 No 46 84.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68310879 + NM_133509 RAD51B 0 . . . 3.32 70.45 28 5.37 No 57 0.61 No 0 0 No -50 0.74 Yes 43 96.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29087164 - NM_001005735 CHEK2 0 . . . 5.8 88.97 14 3.76 No 13 1.84 Yes 0 0 No -24 0.59 No 45 88.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40992887 + NM_001164269 RAD51 0 . . . 2.75 77.65 26 4.77 No 15 0.64 No 0 0 No -25 0.77 Yes 43 45.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59890328 - NM_032043 BRIP1 0 . . . 0.67 0 28 6.73 Yes 33 0.83 Yes 0 0 No -27 0.91 Yes 40 93.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131951432 + NM_005732 RAD50 0 . . . 0.3 61.27 33 5.86 Yes 20 0.6 No 0 0 No -28 0.49 No 24 40.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32965371 + NM_000059 BRCA2 0 . . . 3.42 69.26 21 5.74 Yes 53 0.22 No 0 0 No -20 0.89 Yes 46 51.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6038942 - NM_000535 PMS2 0 . . . 0.2 67.26 55 7.15 Yes 60 -4.27 No 24 0.3 Yes -29 0.91 Yes 37 51.19 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 68902628 + NM_133509 RAD51B 0 . . . 2.2 0 22 4.8 No 57 0.89 Yes 0 0 No -21 0.95 Yes 22 84.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190714481 + NM_000534 PMS1 0 . . . 2.33 0 25 4.72 No 19 1.08 Yes 0 0 No -18 0.61 No 39 44.95 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47635979 + NM_000251 MSH2 0 . . . 1.97 75.25 15 5.2 No 8 0.69 No 0 0 No -14 0.32 No 50 35.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32955349 + NM_000059 BRCA2 0 . . . 0.04 0 34 6 Yes 44 0.88 Yes 0 0 No -27 0.86 Yes 33 81.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69033534 + NM_133509 RAD51B 0 . . . 6.78 74.86 26 4.57 No 71 0.69 No 0 0 No -26 0.92 Yes 41 44 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68611530 + NM_133509 RAD51B 0 . . . 7.28 77.18 35 6.92 Yes 51 1.41 Yes 0 0 No -34 0.9 Yes 49 45.27 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59856369 - NM_032043 BRIP1 0 . . . 3.27 63.15 25 4.94 No 72 1.03 Yes 0 0 No -24 0.65 No 31 85.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68752624 + NM_133509 RAD51B 0 . . . 1.68 58.12 27 4.82 No 75 -6.11 No 0 0 No -24 0.45 No 42 42.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29089654 - NM_001005735 CHEK2 0 . . . 2.57 74.63 43 7.42 Yes 60 -1.19 No 0 0 No -28 0.63 No 24 71.67 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52434417 - NM_004656 BAP1 0 . . . 2.76 77.91 29 6.28 Yes 59 0.74 No 0 0 No -23 0.55 No 46 43.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33446035 - NM_002878 RAD51D 0 . . . 0.32 74.68 16 5.39 No 72 1.39 Yes 0 0 No -22 0.58 No 54 80.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41237253 - NM_007294 BRCA1 0 . . . 3.19 73.21 27 3.99 No 56 1.11 Yes 0 0 No -26 0.87 Yes 44 90.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190651973 + NM_000534 PMS1 0 . . . 1.96 76.88 26 5.47 No 72 -5.42 No 0 0 No -25 0.57 No 49 54.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69005151 + NM_133509 RAD51B 0 . . . 6.45 78.18 14 4.77 No 10 0.94 Yes 0 0 No -24 0.75 Yes 42 59.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89730650 + NM_000314 PTEN 0 . . . 4.98 79.16 35 6.44 Yes 40 -4.59 No 0 0 No -22 0.32 No 44 26.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47759751 + NM_000251 MSH2 0 . . . 1.65 67.29 15 4.3 No 48 0.55 No 0 0 No -21 0.62 No 36 63.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37068907 + NM_000249 MLH1 0 . . . 3.6 0 16 5.83 Yes 42 1.01 Yes 0 0 No -39 0.24 No 38 35.92 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68933779 + NM_133509 RAD51B 0 . . . 1.89 71.81 30 5.83 Yes 46 0.39 No 0 0 No -29 0.83 Yes 15 83.55 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68958679 + NM_133509 RAD51B 0 . . . 1.98 75.22 23 6.24 Yes 53 1.54 Yes 0 0 No -22 0.7 Yes 51 27.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152367194 - NM_005431 XRCC2 0 . . . 3.59 86.52 26 4.28 No 69 -3.95 No 0 0 No -26 0.66 Yes 48 39.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89665681 + NM_000314 PTEN 0 . . . 3.56 69.91 15 5.39 No 0 0.44 No 0 0 No -45 0.49 No 37 84.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94193040 - NM_005591 MRE11 0 . . . 1.67 70.9 18 3.91 No 57 0.5 No 0 0 No -18 0.69 Yes 52 60.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41277616 - NM_007294 BRCA1 0 . . . 1.37 71.68 28 5.17 No 56 -3.81 No 0 0 No -27 0.66 No 57 51.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131936900 + NM_005732 RAD50 0 . . . 0.42 74.73 29 8.24 Yes 34 1.04 Yes 0 0 No -29 0.73 Yes 20 55.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68621494 + NM_133509 RAD51B 0 . . . 4.56 73.3 37 5.82 Yes 52 1.23 Yes 0 0 No -32 0.48 No 40 67.73 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131980624 + NM_005732 RAD50 0 . . . 1.29 75.89 44 6.71 Yes 55 1.19 Yes 0 0 No -38 0.86 Yes 49 74.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69134113 + NM_133509 RAD51B 0 . . . 3.65 79.9 23 5 No 44 0.79 Yes 0 0 No -22 0.75 Yes 45 79.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89637547 + NM_000314 PTEN 0 . . . 3.87 74.69 26 5.38 No 4 0.46 No 0 0 No -25 0.64 No 35 58.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69012128 + NM_133509 RAD51B 0 . . . 8.96 89.35 69 7.54 Yes 5 1.59 Yes 0 0 No -40 0.33 No 37 51.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215648962 - NM_000465 BARD1 0 . . . 0.89 81.23 44 5.94 Yes 46 0.76 No 0 0 No -27 0.77 Yes 51 48.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33435693 - NM_002878 RAD51D 0 . . . 2.88 76.8 28 5.15 No 16 0.61 No 0 0 No -27 0.27 No 42 86.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47633202 + NM_000251 MSH2 0 . . . 2.43 68.86 34 6.93 Yes 53 1.32 Yes 0 0 No -33 0.55 No 48 62.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69081223 + NM_133509 RAD51B 0 . . . 3.53 72.23 18 4.9 No 49 0.33 No 0 0 No -23 0.45 No 45 31.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6017092 - NM_000535 PMS2 0 . . . 2.52 82.82 15 4.58 No 54 0.96 Yes 0 0 No -40 0.63 No 46 86.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1219988 + NM_000455 STK11 0 . . . 1.86 75.64 23 6.32 Yes 23 0.36 No 25 0.36 Yes -22 0.88 Yes 54 37.26 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr2 47698883 + NM_000251 MSH2 0 . . . 3.32 67.53 20 7.14 Yes 68 -4.93 No 0 0 No -19 0.72 Yes 47 63.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41196991 - NM_007294 BRCA1 0 . . . 2.16 69.26 24 4.45 No 14 0.62 No 0 0 No -52 0.46 No 36 41.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68727175 + NM_133509 RAD51B 0 . . . 1.1 84.4 29 5.46 No 63 1.74 Yes 0 0 No -28 0.83 Yes 48 67.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6039594 - NM_000535 PMS2 0 . . . 4.6 75.01 25 5.23 No 0 1.26 Yes 0 0 No -24 0.86 Yes 43 83.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215672533 - NM_000465 BARD1 0 . . . 1.48 66.63 27 4.5 No 62 -1.02 No 0 0 No -26 0.59 No 44 31.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108158013 + NM_000051 ATM 0 . . . 1.37 77.89 30 5.97 Yes 68 -5.09 No 0 0 No -30 0.5 No 46 90.33 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48006145 + NM_000179 MSH6 0 . . . 2.47 0 16 5.19 No 48 0.17 No 0 0 No -26 0.67 Yes 52 47.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33429043 - NM_002878 RAD51D 0 . . . 6.36 76.37 39 6.24 Yes 19 0.58 No 0 0 No -33 0.7 Yes 39 76.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68514220 + NM_133509 RAD51B 0 . . . 1.72 69.36 15 5.1 No 2 1.72 Yes 0 0 No -29 0.23 No 56 35.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47709239 + NM_000251 MSH2 0 . . . 6.76 74.91 16 5.1 No 53 0.15 No 0 0 No -22 0.5 No 51 58.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47791978 + NM_000251 MSH2 0 . . . 5.38 69.87 16 5.03 No 58 1.2 Yes 0 0 No -20 0.72 Yes 36 80.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68836424 + NM_004360 CDH1 0 . . . 2.51 79.64 25 5.57 Yes 2 0.37 No 0 0 No -24 0.64 No 14 66.95 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37089693 + NM_000249 MLH1 0 . . . 0.28 83.78 18 4.8 No 65 0.51 No 0 0 No -17 0.35 No 52 36.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21987945 - NM_000077 CDKN2A 0 . . . 4.94 75.59 24 7.2 Yes 48 0.28 No 0 0 No -24 0.53 No 40 53.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68295737 + NM_133509 RAD51B 0 . . . 2.92 64.08 30 5.84 Yes 76 0.39 No 0 0 No -29 0.93 Yes 44 57.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89704130 + NM_000314 PTEN 0 . . . 6.01 77.65 41 7.62 Yes 13 0.09 No 0 0 No -40 0.83 Yes 45 87.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68443890 + NM_133509 RAD51B 0 . . . 7.01 76.4 15 4.58 No 60 0.6 No 0 0 No -21 0.28 No 43 56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68755772 + NM_133509 RAD51B 0 . . . 3.01 59.51 29 4.48 No 46 0.68 No 0 0 No -20 0.46 No 38 59.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32952334 + NM_000059 BRCA2 0 . . . 0.53 67.73 39 6.48 Yes 14 0.37 No 0 0 No -38 0.75 Yes 44 76.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68786536 + NM_004360 CDH1 0 . . . 0.04 0 30 5.21 No 42 0.45 No 0 0 No -24 0.41 No 16 90.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131955375 + NM_005732 RAD50 0 . . . 5.85 82.57 17 4.8 No 3 0.64 No 0 0 No -58 0.34 No 42 42.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68810651 + NM_133509 RAD51B 0 . . . 1.3 0 17 6.08 Yes 76 -5.37 No 0 0 No -16 0.74 Yes 40 70.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59830603 - NM_032043 BRIP1 0 . . . 1.09 0 16 5.29 No 27 0.55 No 0 0 No -24 0.57 No 43 49.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29117139 - NM_001005735 CHEK2 0 . . . 1.82 74.57 26 6.07 Yes 54 0.8 Yes 0 0 No -25 0.56 No 48 34.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75502774 - NM_001040108 MLH3 0 . . . 1.68 71.33 20 4.15 No 64 -4.79 No 0 0 No -20 0.77 Yes 42 28.46 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131897811 + NM_005732 RAD50 0 . . . 4.09 76.42 26 5.96 Yes 34 -3.15 No 0 0 No -23 0.47 No 49 88.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190655140 + NM_000534 PMS1 0 . . . 2.36 81.53 23 4.29 No 46 0.18 No 0 0 No -22 0.91 Yes 49 71.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68992161 + NM_133509 RAD51B 0 . . . 8.93 92.37 56 7.61 Yes 64 0.38 No 0 0 No -25 0.79 Yes 39 67.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215599110 - NM_000465 BARD1 0 . . . 2.29 72.97 27 5.74 Yes 56 -4.59 No 0 0 No -27 0.49 No 46 68.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68636980 + NM_133509 RAD51B 0 . . . 3.21 75.82 34 7.48 Yes 64 -2.28 No 0 0 No -23 0.41 No 51 76.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68809924 + NM_004360 CDH1 0 . . . 0.89 0 19 5.24 No 2 0.63 No 0 0 No -55 0.21 No 16 49.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41010774 + NM_001164269 RAD51 0 . . . 2.75 78.21 33 5.83 Yes 61 -1.76 No 0 0 No -27 0.3 No 46 41.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190713594 + NM_000534 PMS1 0 . . . 3.48 78.14 35 6.08 Yes 41 0.43 No 0 0 No -34 0.52 No 46 68.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68542954 + NM_133509 RAD51B 0 . . . 2.87 76.23 46 6.7 Yes 35 1.44 Yes 0 0 No -28 0.65 No 23 69.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190707106 + NM_000534 PMS1 0 . . . 0.48 0 23 5 No 25 1.18 Yes 0 0 No -22 0.66 Yes 27 66.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32914502 + NM_000059 BRCA2 0 . . . 4.17 73.95 24 3.83 No 64 -3.08 No 0 0 No -24 0.66 Yes 50 55.28 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32938335 + NM_000059 BRCA2 0 . . . 5.74 78.21 22 4.33 No 49 0.83 Yes 0 0 No -21 0.94 Yes 42 71.66 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68400742 + NM_133509 RAD51B 0 . . . 4.17 82.63 16 4.29 No 62 -5.28 No 0 0 No -25 0.41 No 49 64.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41006986 + NM_001164269 RAD51 0 . . . 4.68 74.31 53 7.58 Yes 33 0.9 Yes 0 0 No -23 0.64 No 43 59.87 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32929988 + NM_000059 BRCA2 0 . . . 2.11 80.22 31 5.71 Yes 58 -3.88 No 0 0 No -30 0.44 No 48 38.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215665781 - NM_000465 BARD1 0 . . . 2.06 78.6 13 5.57 Yes 40 0.78 Yes 0 0 No -26 0.52 No 18 92.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68999314 + NM_133509 RAD51B 0 . . . 0.55 66.82 21 5.29 No 7 0.85 Yes 0 0 No -20 0.8 Yes 58 26.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68968826 + NM_133509 RAD51B 0 . . . 6.63 80.79 34 5.73 Yes 71 1.22 Yes 0 0 No -33 0.75 Yes 51 47.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131963723 + NM_005732 RAD50 0 . . . 4.96 78.59 20 5.57 Yes 27 0.74 No 0 0 No -19 0.69 Yes 31 57.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68788521 + NM_004360 CDH1 0 . . . 5.74 80.78 12 4.24 No 62 -3.04 No 0 0 No -41 0.35 No 50 81.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108127900 + NM_000051 ATM 0 . . . 6.02 77.59 16 4.69 No 44 0.98 Yes 0 0 No -21 0.77 Yes 43 72.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108162859 + NM_000051 ATM 0 . . . 2.01 0 29 5.92 Yes 36 -2.52 No 0 0 No -28 0.74 Yes 46 85.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68496240 + NM_133509 RAD51B 0 . . . 8.19 79.17 26 5.29 No 40 1.39 Yes 0 0 No -25 0.86 Yes 45 36.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68455657 + NM_133509 RAD51B 0 . . . 1.55 0 22 7.77 Yes 50 0.63 No 0 0 No -21 0.73 Yes 42 92.72 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104168461 - NM_001100119 XRCC3 0 . . . 6.47 80.33 25 4.51 No 57 0.87 Yes 0 0 No -24 0.45 No 48 37.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37049408 + NM_000249 MLH1 0 . . . 0.17 74.68 29 5.46 No 64 1.1 Yes 0 0 No -28 0.55 No 47 86.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69039939 + NM_133509 RAD51B 0 . . . 2.58 66.44 34 7.6 Yes 4 1.7 Yes 0 0 No -33 0.7 Yes 47 35.35 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68807244 + NM_004360 CDH1 0 . . . 4.71 84.17 19 5.74 Yes 47 1.09 Yes 0 0 No -18 0.37 No 11 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47774781 + NM_000251 MSH2 0 . . . 4.16 86.51 10 4 No 53 1.1 Yes 0 0 No -21 0.56 No 25 48.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105196749 + NM_021930 RINT1 0 . . . 6.21 82.31 31 5.83 Yes 58 1.18 Yes 0 0 No -30 0.85 Yes 54 64.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68599781 + NM_133509 RAD51B 0 . . . 1.43 85.89 28 5.62 Yes 45 -3.15 No 0 0 No -28 0.46 No 42 45.53 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68371086 + NM_133509 RAD51B 0 . . . 6.45 78.35 14 3.87 No 4 1.1 Yes 0 0 No -34 0.69 Yes 45 74.48 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68827743 + NM_133509 RAD51B 0 . . . 0.45 75.98 53 6.42 Yes -2 0.68 No 0 0 No -34 0.49 No 52 34.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68921090 + NM_133509 RAD51B 0 . . . 2.83 72.16 9 4.69 No 33 -2.81 No 0 0 No -22 0.76 Yes 43 73.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47693301 + NM_000251 MSH2 0 . . . 4.36 81.64 26 5.08 No 8 0.26 No 0 0 No -23 0.44 No 50 56.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68804423 + NM_133509 RAD51B 0 . . . 5.7 81.06 15 6.11 Yes 39 -2.61 No 0 0 No -14 0.38 No 50 73.5 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75514464 - NM_001040108 MLH3 0 . . . 2.57 56.13 20 4.11 No 19 0.47 No 0 0 No -20 0.33 No 52 76.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68744074 + NM_133509 RAD51B 0 . . . 5.95 86.6 20 4.53 No 1 0.94 Yes 0 0 No -29 0.71 Yes 46 93.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59876361 - NM_032043 BRIP1 0 . . . 2.49 77.34 23 7.65 Yes 49 -4.75 No 0 0 No -22 0.88 Yes 44 74.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68392685 + NM_133509 RAD51B 0 . . . 1.36 67.6 44 6.61 Yes 72 1 Yes 0 0 No -25 0.43 No 48 75.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68780299 + NM_004360 CDH1 0 . . . 2.98 66.58 44 5.41 No 58 -3.89 No 0 0 No -28 0.48 No 43 55.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68500243 + NM_133509 RAD51B 0 . . . 1.71 66.01 31 5.57 Yes 27 0.37 No 0 0 No -25 0.37 No 24 63.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68672222 + NM_133509 RAD51B 0 . . . 5.76 75.53 22 5.18 No 72 -5.44 No 0 0 No -28 0.4 No 45 40.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59829440 - NM_032043 BRIP1 0 . . . 1.81 77.88 13 4.34 No 35 0.47 No 0 0 No -20 0.43 No 42 56.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108197573 + NM_000051 ATM 0 . . . 1.59 83.04 20 4.48 No 27 1.52 Yes 0 0 No -19 0.67 Yes 31 57.21 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108140665 + NM_000051 ATM 0 . . . 3.94 80.01 49 6.85 Yes 19 1.17 Yes 0 0 No -18 0.41 No 39 74.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69073752 + NM_133509 RAD51B 0 . . . 0.4 63.09 27 5.73 Yes 57 -5.33 No 0 0 No -29 0.65 No 43 47.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59866728 - NM_032043 BRIP1 0 . . . 5.16 75.47 39 7.32 Yes 44 0.3 No 0 0 No -29 0.72 Yes 51 52.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29115107 - NM_001005735 CHEK2 0 . . . 9.88 90.32 16 4.69 No 9 0.95 Yes 0 0 No -22 0.43 No 49 95.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68418355 + NM_133509 RAD51B 0 . . . 8.22 81.78 52 6.73 Yes 4 0.15 No 0 0 No -26 0.94 Yes 54 54.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89692197 + NM_000314 PTEN 0 . . . 8.15 89.98 26 5.91 Yes 58 -2.83 No 0 0 No -30 0.75 Yes 51 64.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68836451 + NM_004360 CDH1 0 . . . 2.39 69.95 19 5 No -4 0.58 No 0 0 No -22 0.54 No 53 49.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41216128 - NM_007294 BRCA1 0 . . . 2.74 64.19 20 6.32 Yes 45 0.51 No 0 0 No -24 0.47 No 49 52.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190661919 + NM_000534 PMS1 0 . . . 3.08 74.09 14 4.24 No -2 1.43 Yes 0 0 No -31 0.83 Yes 45 50.74 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56779801 + NM_058216 RAD51C 0 . . . 2.23 80.86 34 7.64 Yes 74 -4.76 No 0 0 No -28 0.77 Yes 54 63.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68474838 + NM_133509 RAD51B 0 . . . 0.12 66.37 23 5.55 No 61 0.25 No 0 0 No -29 0.48 No 38 83.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131941247 + NM_005732 RAD50 0 . . . 2.34 84.5 12 4.79 No 33 1.04 Yes 0 0 No -22 0.5 No 56 41.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90945078 - NM_002485 NBN 0 . . . 1.04 77.12 39 6.42 Yes 20 1.12 Yes 0 0 No -38 0.55 No 38 61.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37070782 + NM_000249 MLH1 0 . . . 0.99 69.58 15 5 No 12 0.73 No 0 0 No -27 0.44 No 46 68.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6017856 - NM_000535 PMS2 0 . . . 4.47 80.3 27 6.82 Yes 63 0.4 No 0 0 No -26 0.69 Yes 50 57.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32924027 + NM_000059 BRCA2 0 . . . 4.46 64.97 30 6.32 Yes 28 0.28 No 0 0 No -34 0.66 Yes 30 93.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59899224 - NM_032043 BRIP1 0 . . . 6.24 75.71 16 4.69 No 10 1.07 Yes 0 0 No -44 0.87 Yes 48 83.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45796538 - NM_001048171 MUTYH 0 . . . 0.66 74.86 38 6.25 Yes 59 1.16 Yes 0 0 No -32 0.73 Yes 39 42.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108113799 + NM_000051 ATM 0 . . . 1.01 58.87 15 5.22 No 19 0.48 No 0 0 No -22 0.8 Yes 39 60.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68602208 + NM_133509 RAD51B 0 . . . 3.45 80.45 32 8.4 Yes 41 -3.04 No 0 0 No -22 0.87 Yes 51 35.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215656152 - NM_000465 BARD1 0 . . . 7.56 89.49 43 6.59 Yes 44 0.77 Yes 0 0 No -42 0.85 Yes 14 59.79 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56778210 + NM_058216 RAD51C 0 . . . 5.94 69.49 30 5.28 No 32 1.15 Yes 0 0 No -55 0.92 Yes 39 76.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47638656 + NM_000251 MSH2 0 . . . 0.44 69.3 21 4.75 No 66 1.91 Yes 0 0 No -20 0.77 Yes 42 93.77 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68931400 + NM_133509 RAD51B 0 . . . 1.68 77.46 29 4.17 No 61 2.17 Yes 0 0 No -19 0.51 No 45 90.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215648782 - NM_000465 BARD1 0 . . . 4.96 91.21 15 4.57 No 12 1.12 Yes 0 0 No -21 0.44 No 46 92.27 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68744370 + NM_133509 RAD51B 0 . . . 5.77 78.95 20 5.57 Yes 0 0.37 No 0 0 No -19 0.65 No 24 66.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215662505 - NM_000465 BARD1 0 . . . 4.3 75.35 29 5.56 Yes 20 1.23 Yes 0 0 No -28 0.76 Yes 38 92.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59767951 - NM_032043 BRIP1 0 . . . 5.74 82.44 66 8.11 Yes 44 0.56 No 0 0 No -37 0.66 No 40 85.96 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32891017 + NM_000059 BRCA2 0 . . . 5.03 85.04 40 4.56 No 37 -1.59 No 0 0 No -27 0.53 No 51 60.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68919299 + NM_133509 RAD51B 0 . . . 3.25 76.07 19 5.47 No 58 -6.23 No 0 0 No -27 0.31 No 49 34.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68336900 + NM_133509 RAD51B 0 . . . 5.9 85.4 15 5.39 No 76 -7.12 No 0 0 No -26 0.22 No 51 80.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29097720 - NM_001005735 CHEK2 0 . . . 0.72 0 10 5.2 No 71 0.82 Yes 0 0 No -20 0.76 Yes 45 69.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68557716 + NM_133509 RAD51B 0 . . . 0.95 75.56 44 5.39 No 74 0.99 Yes 0 0 No -23 0.91 Yes 53 75.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190714395 + NM_000534 PMS1 0 . . . 9.93 79.32 13 5.51 No 53 0.77 Yes 0 0 No -47 0.63 No 16 80.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68664756 + NM_133509 RAD51B 0 . . . 4.74 79.79 12 4.7 No 66 -2.22 No 0 0 No -31 0.61 No 40 66.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94156883 - NM_005591 MRE11 0 . . . 2.02 77.57 28 5.38 No 26 -2.79 No 0 0 No -27 0.45 No 39 42.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131896448 + NM_005732 RAD50 0 . . . 2.63 74.08 17 3.95 No 51 1.23 Yes 0 0 No -29 0.49 No 40 89.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131977190 + NM_005732 RAD50 0 . . . 3.87 82.81 37 7.4 Yes 71 -0.23 No 0 0 No -36 0.76 Yes 47 80.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68815943 + NM_133509 RAD51B 0 . . . 3.58 77.91 17 6.71 Yes 58 -5.67 No 0 0 No -16 0.39 No 52 34.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59755063 - NM_032043 BRIP1 0 . . . 8.73 80.39 23 4.69 No 50 0.99 Yes 0 0 No -21 0.42 No 38 57.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47642252 + NM_000251 MSH2 0 . . . 2.91 79.33 16 4.69 No 20 1.89 Yes 0 0 No -21 0.69 Yes 45 86.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68775107 + NM_004360 CDH1 0 . . . 5.08 72.49 22 6.32 Yes 13 0.61 No 0 0 No -20 0.82 Yes 45 91.25 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68630513 + NM_133509 RAD51B 0 . . . 3.14 78.82 14 6.52 Yes 72 1.34 Yes 0 0 No -44 0.51 No 45 56.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29081794 - NM_001005735 CHEK2 0 . . . 6.62 79.49 27 5.19 No 17 1.46 Yes 0 0 No -50 0.23 No 41 81.77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68814703 + NM_133509 RAD51B 0 . . . 3.57 74.27 9 5 No -1 0.33 No 0 0 No -27 0.7 Yes 39 35.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68819304 + NM_133509 RAD51B 0 . . . 4.42 77.7 23 5.09 No 24 0.9 Yes 0 0 No -23 0.89 Yes 34 47.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68396863 + NM_133509 RAD51B 0 . . . 5.91 74.65 21 4.62 No 31 0.02 No 0 0 No -20 0.57 No 47 72.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68536069 + NM_133509 RAD51B 0 . . . 7.33 85.02 23 5.37 No 7 0.28 No 0 0 No -22 0.74 Yes 44 83.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68794709 + NM_133509 RAD51B 0 . . . 1.98 72.77 46 6.86 Yes 65 1.47 Yes 0 0 No -45 0.64 No 60 54.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68782272 + NM_004360 CDH1 0 . . . 3.27 70.85 83 8.04 Yes 31 0.83 Yes 0 0 No -27 0.54 No 45 64.26 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29108819 - NM_001005735 CHEK2 0 . . . 2.07 68.66 32 5.46 No 61 -5.35 No 0 0 No -31 0.54 No 40 54.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37054327 + NM_000249 MLH1 0 . . . 3.9 86.3 17 5.28 No 55 1.77 Yes 0 0 No -34 0.6 No 49 40.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131922993 + NM_005732 RAD50 0 . . . 6.34 84.63 35 5.65 Yes 1 1.04 Yes 0 0 No -34 0.74 Yes 47 35.57 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6031386 - NM_000535 PMS2 0 . . . 3.17 66.46 25 5.57 Yes 16 1.1 Yes 0 0 No -25 0.55 No 42 90.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152343189 - NM_005431 XRCC2 0 . . . 3.6 67.38 17 4.58 No 61 0.37 No 0 0 No -16 0.78 Yes 53 29.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47689504 + NM_000251 MSH2 0 . . . 4.97 74 12 5.39 No 72 1.54 Yes 0 0 No -30 0.69 Yes 52 69.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84388511 - NM_139076 FAM175A 0 . . . 4.45 63.49 25 5.44 No 21 1.67 Yes 0 0 No -21 0.41 No 52 51.65 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69013778 + NM_133509 RAD51B 0 . . . 0.31 63.09 27 6.2 Yes 54 1.08 Yes 0 0 No -26 0.94 Yes 32 94.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68540871 + NM_133509 RAD51B 0 . . . 14.57 97.18 19 7.94 Yes 32 0.4 No 0 0 No -22 0.73 Yes 39 79.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152345883 - NM_005431 XRCC2 0 . . . 0.8 81.51 24 5.45 No 61 0.24 No 0 0 No -23 0.64 No 52 63.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68630030 + NM_133509 RAD51B 0 . . . 3.06 72.86 15 5.9 Yes 26 0.77 Yes 0 0 No -15 0.63 No 25 50.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215616618 - NM_000465 BARD1 0 . . . 1.12 70.91 34 5.58 Yes 62 -5.22 No 0 0 No -27 0.68 Yes 48 70.38 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131979155 + NM_005732 RAD50 0 . . . 4.27 73.47 18 7.27 Yes 47 0.29 No 0 0 No -33 0.5 No 41 38.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108192806 + NM_000051 ATM 0 . . . 5.15 68.64 31 5.48 No 74 1.2 Yes 0 0 No -30 0.74 Yes 38 67.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94169729 - NM_005591 MRE11 0 . . . 4.63 66.57 35 7.99 Yes 59 0.52 No 0 0 No -34 0.35 No 49 62.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108125221 + NM_000051 ATM 0 . . . 2.51 71.35 13 4.78 No 47 -2.2 No 0 0 No -42 0.66 No 51 85.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 152361071 - NM_005431 XRCC2 0 . . . 2.98 60.97 32 6.02 Yes 14 -2.71 No 0 0 No -25 0.41 No 44 82.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94154592 - NM_005591 MRE11 0 . . . 7.07 72.81 34 5.74 Yes 58 -2.1 No 0 0 No -25 0.44 No 42 94.04 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40997847 + NM_001164269 RAD51 0 . . . 7.81 88.21 40 6.42 Yes 47 1.62 Yes 0 0 No -37 0.49 No 11 83.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47777706 + NM_000251 MSH2 0 . . . 1.47 77.63 17 4.92 No 7 1.16 Yes 0 0 No -21 0.78 Yes 51 78.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190691064 + NM_000534 PMS1 0 . . . 0.33 55.89 17 4.51 No 36 0.5 No 0 0 No -26 0.64 No 37 55.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68585087 + NM_133509 RAD51B 0 . . . 2.85 67.25 32 5.82 Yes 39 1.6 Yes 0 0 No -31 0.79 Yes 45 93.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215626608 - NM_000465 BARD1 0 . . . 4.51 76.88 13 4.36 No 15 1.34 Yes 0 0 No -28 0.93 Yes 43 75.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6038023 - NM_000535 PMS2 0 . . . 1.15 74.91 23 4.62 No 68 0.93 Yes 0 0 No -20 0.79 Yes 53 68.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41204499 - NM_007294 BRCA1 0 . . . 3.58 76.47 20 4.78 No 64 0.15 No 0 0 No -19 0.73 Yes 34 90.36 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68912654 + NM_133509 RAD51B 0 . . . 0.39 73.94 16 5.69 Yes 0 0.84 Yes 0 0 No -20 0.49 No 50 70.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37041033 + NM_000249 MLH1 0 . . . 8.6 75.88 28 5.24 No -2 1.71 Yes 0 0 No -22 0.68 Yes 42 87.45 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68807648 + NM_133509 RAD51B 0 . . . 10.37 88.46 26 7.13 Yes 12 0.74 No 0 0 No -24 0.35 No 46 86.76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190658594 + NM_000534 PMS1 0 . . . 1.98 68.78 22 6.28 Yes 35 0.11 No 0 0 No -25 0.72 Yes 52 33.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59884684 - NM_032043 BRIP1 0 . . . 3.14 79.86 21 4.44 No 34 0.65 No 0 0 No -32 0.67 Yes 50 73.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68551664 + NM_133509 RAD51B 0 . . . 1.28 68.99 29 5.59 Yes 67 -5.15 No 0 0 No -22 0.42 No 48 64.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37055139 + NM_000249 MLH1 0 . . . 2.92 0 24 4.98 No 14 0.96 Yes 0 0 No -23 0.46 No 44 49.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68370750 + NM_133509 RAD51B 0 . . . 3.97 65.1 24 4.78 No 47 0.72 No 0 0 No -57 0.37 No 41 67.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41017904 + NM_001164269 RAD51 0 . . . 0.32 0 18 4.89 No 52 -3.04 No 0 0 No -29 0.48 No 57 72.78 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90974196 - NM_002485 NBN 0 . . . 6.73 87.37 28 5.38 No -3 0.74 No 0 0 No -27 0.84 Yes 42 63.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59895030 - NM_032043 BRIP1 0 . . . 2.02 63.98 18 4.9 No 62 0.22 No 0 0 No -17 0.19 No 38 79.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105197512 + NM_021930 RINT1 0 . . . 2.24 78.83 42 6.93 Yes 59 -5.08 No 0 0 No -29 0.87 Yes 49 73.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108222543 + NM_000051 ATM 0 . . . 0.63 70.98 29 7.16 Yes 0 0.87 Yes 0 0 No -28 0.5 No 58 49.68 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37047858 + NM_000249 MLH1 0 . . . 1.71 0 27 5.33 No 7 -2.53 No 0 0 No -30 0.79 Yes 38 45.66 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41228372 - NM_007294 BRCA1 0 . . . 8.84 90.57 33 6.16 Yes 60 1.51 Yes 0 0 No -31 0.44 No 50 80.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84406704 - NM_139076 FAM175A 0 . . . 0.6 58.34 40 6.56 Yes NA NA NA 0 0 No -39 0.46 No 41 47.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59846003 - NM_032043 BRIP1 0 . . . 2.67 81.36 21 4.69 No 18 0.37 No 0 0 No -20 0.71 Yes 51 62.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75488423 - NM_001040108 MLH3 0 . . . 5.33 81.86 58 7.73 Yes 35 1.28 Yes 0 0 No -25 0.85 Yes 44 60.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59814075 - NM_032043 BRIP1 0 . . . 0.36 61.88 26 6.16 Yes 75 0.56 No 0 0 No -25 0.51 No 44 44.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32894476 + NM_000059 BRCA2 0 . . . 2.94 68.72 39 6.3 Yes 37 0.47 No 0 0 No -29 0.3 No 50 61.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68979396 + NM_133509 RAD51B 0 . . . 4.6 0 50 8.83 Yes 43 0.39 No 0 0 No -28 0.64 No 49 54.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68943225 + NM_133509 RAD51B 0 . . . 4.06 72.42 32 5.57 Yes 6 0.65 No 0 0 No -31 0.87 Yes 38 52.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7564126 - NM_000546 TP53 0 . . . 2.3 84.41 22 4.89 No 66 0.48 No 0 0 No -25 0.59 No 35 82.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131961767 + NM_005732 RAD50 0 . . . 4.86 84.51 31 7.87 Yes 28 1.16 Yes 0 0 No -30 0.88 Yes 30 69.25 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90978337 - NM_002485 NBN 0 . . . 6.67 84.05 22 5.73 Yes 25 0.01 No 0 0 No -22 0.68 Yes 33 38.03 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89623518 + NM_000314 PTEN 0 . . . 0.98 67.33 19 5.03 No 68 -5 No 0 0 No -27 0.72 Yes 55 39.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68940241 + NM_133509 RAD51B 0 . . . 7.23 90.41 16 4.1 No 27 1.15 Yes 0 0 No -20 0.79 Yes 36 79.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152351387 - NM_005431 XRCC2 0 . . . 0.42 67.46 36 6 Yes 68 1.62 Yes 0 0 No -29 0.62 No 39 65.39 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68897864 + NM_133509 RAD51B 0 . . . 4.91 71.42 29 6.32 Yes 63 0.56 No 0 0 No -28 0.9 Yes 43 65.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68659322 + NM_133509 RAD51B 0 . . . 4 88.98 15 6.03 Yes 9 0.39 No 0 0 No -30 0.56 No 49 59.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848727 - NM_032043 BRIP1 0 . . . 1.05 0 22 6.2 Yes 0 0.72 No 0 0 No -21 0.94 Yes 33 62.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108125129 + NM_000051 ATM 0 . . . 1.46 58.11 27 5.29 No 70 -6.01 No 0 0 No -26 0.62 No 48 38.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89685157 + NM_000314 PTEN 0 . . . 0.88 60.6 23 5.1 No 61 0.7 No 0 0 No -27 0.7 Yes 46 87.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41253931 - NM_007294 BRCA1 0 . . . 3.42 74.81 33 5.03 No 10 0.85 Yes 0 0 No -23 0.5 No 48 69.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41248628 - NM_007294 BRCA1 0 . . . 8.4 79.86 33 8.38 Yes 54 0.71 No 0 0 No -32 0.5 No 50 41.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68304921 + NM_133509 RAD51B 0 . . . 3.43 65.83 22 4.77 No 69 0.85 Yes 0 0 No -21 0.87 Yes 42 60.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68798231 + NM_004360 CDH1 0 . . . 0.09 74.68 13 4.36 No 4 0.41 No 0 0 No -16 0.3 No 54 86.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131952523 + NM_005732 RAD50 0 . . . 6.68 78.95 22 5.66 Yes 3 0.75 No 0 0 No -25 0.81 Yes 47 92.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47631736 + NM_000251 MSH2 0 . . . 4.45 72.19 29 5.92 Yes 57 -3.75 No 0 0 No -28 0.74 Yes 51 49.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75517369 - NM_001040108 MLH3 0 . . . 0.13 74.23 43 7.49 Yes 29 1.46 Yes 0 0 No -21 0.62 No 23 34.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47758227 + NM_000251 MSH2 0 . . . 1.71 71.54 14 3.67 No 13 0.73 No 0 0 No -19 0.41 No 45 54.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68839945 + NM_004360 CDH1 0 . . . 5.99 86.84 16 5.29 No 9 0.81 Yes 0 0 No -50 0.37 No 49 92.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6021541 - NM_000535 PMS2 0 . . . 2.13 79.38 16 4.43 No 7 0.51 No 0 0 No -20 0.41 No 51 82.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108164778 + NM_000051 ATM 0 . . . 1.29 71.8 24 5.29 No 42 0.72 No 0 0 No -23 0.86 Yes 47 32.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68320332 + NM_133509 RAD51B 0 . . . 6.83 79.15 24 4.93 No 22 0.46 No 0 0 No -23 0.55 No 41 70.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131977687 + NM_005732 RAD50 0 . . . 1.44 71.23 19 6.16 Yes 46 -1.6 No 0 0 No -18 0.71 Yes 42 65.86 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89709140 + NM_000314 PTEN 0 . . . 4.66 71.61 37 6.76 Yes 17 0.82 Yes 0 0 No -25 0.61 No 40 70.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108144873 + NM_000051 ATM 0 . . . 2.93 0 16 4.05 No 9 0.22 No 0 0 No -23 0.61 No 46 83.34 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68886851 + NM_133509 RAD51B 0 . . . 2.36 74.98 24 4.56 No 48 1.16 Yes 0 0 No -19 0.45 No 49 51.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41271568 - NM_007294 BRCA1 0 . . . 1.73 75.07 22 5.99 Yes 37 0.4 No 0 0 No -21 0.92 Yes 44 55.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59911443 - NM_032043 BRIP1 0 . . . 1.7 68.67 15 5.35 No 35 1.03 Yes 0 0 No -23 0.57 No 23 21.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59915340 - NM_032043 BRIP1 0 . . . 4.37 71.85 14 3.87 No 17 0.83 Yes 0 0 No -25 0.82 Yes 41 71.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56803804 + NM_058216 RAD51C 0 . . . 2.84 69.72 34 5.66 Yes 14 -2.56 No 0 0 No -23 0.79 Yes 46 72.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59908461 - NM_032043 BRIP1 0 . . . 6.08 76.19 17 6.48 Yes 66 1.64 Yes 0 0 No -16 0.85 Yes 47 87.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89637034 + NM_000314 PTEN 0 . . . 8.78 94.72 15 6.06 Yes 13 1.43 Yes 0 0 No -22 0.5 No 45 94.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68851299 + NM_133509 RAD51B 0 . . . 2.62 79.69 26 5 No 17 1.57 Yes 0 0 No -25 0.91 Yes 41 90.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47676519 + NM_000251 MSH2 0 . . . 4.6 84.17 30 8.76 Yes 65 1.98 Yes 0 0 No -29 0.68 Yes 11 48.94 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94207730 - NM_005591 MRE11 0 . . . 4.74 83.85 21 5.02 No 1 0.89 Yes 0 0 No -20 0.57 No 38 59.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr1 45807904 - NM_001048171 MUTYH 0 . . . 2.93 77.85 29 4.03 No 9 0.76 No 0 0 No -25 0.52 No 49 96.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6030177 - NM_000535 PMS2 0 . . . 5.87 76.57 13 3.77 No 4 0.31 No 0 0 No -24 0.56 No 45 80.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75483639 - NM_001040108 MLH3 0 . . . 2.9 78.53 33 5 No 35 -3.05 No 0 0 No -26 0.51 No 50 67.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68958391 + NM_133509 RAD51B 0 . . . 4.45 79.55 17 4.23 No 26 0.39 No 0 0 No -22 0.68 Yes 44 49.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152342630 - NM_005431 XRCC2 0 . . . 0.27 0 21 4.51 No 4 0.16 No 0 0 No -38 0.65 No 45 27.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29129555 - NM_001005735 CHEK2 0 . . . 0.52 0 23 4.45 No 14 0.34 No 0 0 No -22 0.67 Yes 44 90.15 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89677766 + NM_000314 PTEN 0 . . . 0.21 83.01 21 5.2 No 9 1.43 Yes 0 0 No -20 0.52 No 49 89.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152343788 - NM_005431 XRCC2 0 . . . 2.08 81.94 19 5.6 Yes 61 1.04 Yes 0 0 No -25 0.94 Yes 14 25.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59910048 - NM_032043 BRIP1 0 . . . 0.7 0 16 4.48 No 63 1.51 Yes 0 0 No -23 0.68 Yes 48 68.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52443532 - NM_004656 BAP1 0 . . . 4.1 80.32 14 3.87 No -4 0.34 No 0 0 No -18 0.6 No 44 47.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68824509 + NM_004360 CDH1 0 . . . 3.63 76.04 21 6.96 Yes 54 0.52 No 0 0 No -32 0.39 No 41 38.31 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108224306 + NM_000051 ATM 0 . . . 0.38 77.88 32 6.46 Yes 40 1 Yes 0 0 No -26 0.52 No 48 55.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108208252 + NM_000051 ATM 0 . . . 3.51 79.76 27 3.89 No 16 1.51 Yes 0 0 No -26 0.78 Yes 48 48.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68792992 + NM_133509 RAD51B 0 . . . 6.24 82.31 17 5.63 Yes 57 1.25 Yes 0 0 No -29 0.52 No 55 39.36 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108229330 + NM_000051 ATM 0 . . . 1.72 0 26 5.66 Yes 7 0.22 No 0 0 No -25 0.95 Yes 51 94.53 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94185208 - NM_005591 MRE11 0 . . . 3.6 85.02 22 6.04 Yes 4 1.05 Yes 0 0 No -26 0.64 No 54 61.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108157459 + NM_000051 ATM 0 . . . 4.74 71.02 20 4.36 No 24 0.31 No 0 0 No -18 0.27 No 55 54.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108103545 + NM_000051 ATM 0 . . . 2.4 73.11 24 6.21 Yes 27 0.82 Yes 0 0 No -30 0.53 No 31 87.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68865487 + NM_004360 CDH1 0 . . . 5.15 90.14 30 7.14 Yes 63 1.71 Yes 0 0 No -29 0.74 Yes 19 52.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68710875 + NM_133509 RAD51B 0 . . . 4.06 63.6 41 4.9 No 67 0.12 No 0 0 No -24 0.45 No 28 49.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68284819 + NM_133509 RAD51B 0 . . . 1.18 88.76 34 6.09 Yes 29 0.77 No 0 0 No -17 0.7 Yes 46 74.3 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56775192 + NM_058216 RAD51C 0 . . . 0.33 84.22 39 5.23 No 33 1.13 Yes 0 0 No -38 0.43 No 50 56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41025612 + NM_001164269 RAD51 0 . . . 1.15 61.94 22 4.9 No 74 -3.63 No 0 0 No -21 0.42 No 35 56.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131971214 + NM_005732 RAD50 0 . . . 4.83 70.51 26 5.57 Yes 65 0.59 No 0 0 No -26 0.52 No 17 45.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68436802 + NM_133509 RAD51B 0 . . . 7.62 94.34 16 4.24 No 14 0.82 Yes 0 0 No -22 0.36 No 44 85.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69139263 + NM_133509 RAD51B 0 . . . 8.65 96.46 22 3.58 No 72 0.16 No 0 0 No -22 0.53 No 50 80.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90996106 - NM_002485 NBN 0 . . . 0 69.06 29 5.49 No 59 0.03 No 0 0 No -22 0.77 Yes 17 24.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108217884 + NM_000051 ATM 0 . . . 1.73 72.84 23 5.39 No 50 -4.93 No 0 0 No -22 0.45 No 38 75.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41237799 - NM_007294 BRCA1 0 . . . 2.99 0 17 5.29 No 48 -2.81 No 0 0 No -16 0.5 No 46 65.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190651082 + NM_000534 PMS1 0 . . . 2.36 59.33 16 4.48 No 69 -6.61 No 0 0 No -21 0.29 No 52 32.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40993922 + NM_001164269 RAD51 0 . . . 2.6 0 37 7.24 Yes 51 0.57 No 0 0 No -36 0.34 No 31 65.75 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68901914 + NM_133509 RAD51B 0 . . . 9.65 78.24 32 6.32 Yes 22 0.93 Yes 0 0 No -26 0.47 No 36 76.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47731400 + NM_000251 MSH2 0 . . . 3.98 66.54 19 4.09 No -4 0.45 No 0 0 No -24 0.63 No 62 63.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190685285 + NM_000534 PMS1 0 . . . 2.47 70.1 16 3.93 No 16 0.31 No 0 0 No -26 0.76 Yes 49 57.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68548796 + NM_133509 RAD51B 0 . . . 1.41 84.22 20 6.77 Yes 33 1.14 Yes 0 0 No -39 0.57 No 50 61.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68832822 + NM_004360 CDH1 0 . . . 4.76 76.15 17 4.69 No 13 0.73 No 0 0 No -20 0.9 Yes 45 62.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190648755 + NM_000534 PMS1 0 . . . 4.74 77.5 24 5.78 Yes 73 0.33 No 0 0 No -23 0.72 Yes 44 46.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131943244 + NM_005732 RAD50 0 . . . 7.56 76.28 25 5.6 Yes 7 0.07 No 0 0 No -25 0.69 Yes 45 62.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68915898 + NM_133509 RAD51B 0 . . . 4.28 70.58 23 5.39 No 23 0.08 No 0 0 No -22 0.91 Yes 36 42.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41222685 - NM_007294 BRCA1 0 . . . 4.77 68.36 14 4.95 No 41 -4.1 No 0 0 No -24 0.53 No 52 45.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68433226 + NM_133509 RAD51B 0 . . . 1.26 70.96 18 4.24 No 68 0.23 No 0 0 No -27 0.53 No 33 95.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47793269 + NM_000251 MSH2 0 . . . 3.99 80.69 33 10.68 Yes 1 0.19 No 0 0 No -30 0.53 No 47 61.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68813447 + NM_133509 RAD51B 0 . . . 0.16 0 15 5.71 Yes 43 1.13 Yes 0 0 No -23 0.54 No 15 74.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69041158 + NM_133509 RAD51B 0 . . . 3.61 82.4 17 6.93 Yes -4 0.61 No 0 0 No -25 0.81 Yes 48 46.98 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68789610 + NM_133509 RAD51B 0 . . . 6.37 81.28 21 6.11 Yes 50 -2.68 No 0 0 No -34 0.56 No 43 88.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89667659 + NM_000314 PTEN 0 . . . 7.5 81.9 16 4 No 64 1.23 Yes 0 0 No -40 0.49 No 48 70.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131931735 + NM_005732 RAD50 0 . . . 4.06 72.13 20 3.78 No 57 0.88 Yes 0 0 No -29 0.71 Yes 43 48.83 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90948019 - NM_002485 NBN 0 . . . 3.93 78.77 22 4.8 No 23 0.95 Yes 0 0 No -21 0.9 Yes 28 82.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37087517 + NM_000249 MLH1 0 . . . 8.35 80.12 16 4.69 No 67 0.82 Yes 0 0 No -47 0.5 No 35 79.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131969985 + NM_005732 RAD50 0 . . . 4.1 77.17 29 7.35 Yes 57 1.18 Yes 0 0 No -28 0.92 Yes 48 80.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41261476 - NM_007294 BRCA1 0 . . . 8.48 85.44 14 4.7 No 21 1.87 Yes 0 0 No -35 0.56 No 42 54.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69045581 + NM_133509 RAD51B 0 . . . 3.13 71.54 15 6.82 Yes 15 1.22 Yes 0 0 No -29 0.6 No 43 94.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23625203 - NM_024675 PALB2 0 . . . 2.88 56.54 16 4.65 No 32 0.57 No 0 0 No -21 0.78 Yes 30 71.92 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190695372 + NM_000534 PMS1 0 . . . 8.53 72.21 35 5.07 No 68 0.63 No 0 0 No -22 0.62 No 42 48.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32938560 + NM_000059 BRCA2 0 . . . 11.96 89.66 47 7.11 Yes 30 0.95 Yes 0 0 No -24 0.7 Yes 38 69.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75502032 - NM_001040108 MLH3 0 . . . 2.31 80.34 22 4.86 No 32 0.99 Yes 0 0 No -21 0.8 Yes 21 41.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21973761 - NM_000077 CDKN2A 0 . . . 5.86 81.92 17 4.44 No 24 -3.12 No 0 0 No -20 0.51 No 42 71.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47784536 + NM_000251 MSH2 0 . . . 2.11 73.79 20 6.48 Yes 76 1.42 Yes 0 0 No -27 0.41 No 46 70.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69044480 + NM_133509 RAD51B 0 . . . 0.07 63.01 33 7 Yes 20 0.56 No 0 0 No -31 0.39 No 25 58.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105177437 + NM_021930 RINT1 0 . . . 3.57 69.18 23 4.69 No 34 0.9 Yes 0 0 No -23 0.79 Yes 50 63.47 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68790075 + NM_004360 CDH1 0 . . . 0.07 0 16 4.31 No 60 0.27 No 0 0 No -16 0.31 No 22 83.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108197428 + NM_000051 ATM 0 . . . 4.71 84.27 38 5.63 Yes 30 1.35 Yes 0 0 No -33 0.71 Yes 28 88.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47724085 + NM_000251 MSH2 0 . . . 2.03 79.56 21 5.81 Yes 28 0.74 No 0 0 No -27 0.62 No 30 69.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68859956 + NM_133509 RAD51B 0 . . . 0.71 70.76 28 5.63 Yes 62 -5.91 No 0 0 No -27 0.95 Yes 55 74.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108178465 + NM_000051 ATM 0 . . . 3.47 78.92 27 5 No 20 1.3 Yes 0 0 No -26 0.47 No 48 57.02 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32945675 + NM_000059 BRCA2 0 . . . 6.25 72.44 15 5.48 No 29 0.97 Yes 0 0 No -32 0.66 Yes 29 70.59 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84393375 - NM_139076 FAM175A 0 . . . 3.32 59.92 21 6.18 Yes 71 0.37 No 0 0 No -28 0.33 No 43 60.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47804458 + NM_000251 MSH2 0 . . . 4.23 79.72 12 5 No -3 0.56 No 0 0 No -25 0.41 No 42 75.18 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68526605 + NM_133509 RAD51B 0 . . . 6.79 85.31 19 4.94 No 47 0.26 No 0 0 No -37 0.66 No 38 49.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215614726 - NM_000465 BARD1 0 . . . 4.7 75.3 24 4.8 No 0 0.61 No 0 0 No -23 0.86 Yes 52 59.32 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23617978 - NM_024675 PALB2 0 . . . 1.8 74.68 32 4.03 No 64 1.1 Yes 0 0 No -27 0.38 No 49 58.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68439732 + NM_133509 RAD51B 0 . . . 4.44 68.91 15 5.2 No 72 0.88 Yes 0 0 No -14 0.63 No 52 84.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37060439 + NM_000249 MLH1 0 . . . 3.34 73.42 36 5.76 Yes 15 0.69 No 0 0 No -36 0.38 No 43 82.3 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68827630 + NM_004360 CDH1 0 . . . 1.88 70.08 31 5.99 Yes 14 1.14 Yes 0 0 No -30 0.59 No 44 82.7 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105202444 + NM_021930 RINT1 0 . . . 0.14 61.46 64 8.65 Yes 58 -4.31 No 0 0 No -29 0.49 No 47 56.62 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68348245 + NM_133509 RAD51B 0 . . . 0.73 70.08 35 5.83 Yes 30 1.35 Yes 0 0 No -28 0.51 No 28 88.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94156973 - NM_005591 MRE11 0 . . . 3.54 70.73 20 5.1 No 60 0.58 No 0 0 No -19 0.57 No 47 44.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215669418 - NM_000465 BARD1 0 . . . 0.77 72.96 33 6.85 Yes 64 -5.36 No 0 0 No -33 0.59 No 41 59.73 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47714194 + NM_000251 MSH2 0 . . . 1.35 65.58 18 5.26 No 59 -2.5 No 0 0 No -22 0.43 No 42 87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108154616 + NM_000051 ATM 0 . . . 3.44 69.49 25 5.95 Yes 27 0.02 No 0 0 No -24 0.83 Yes 46 71.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68554833 + NM_133509 RAD51B 0 . . . 0.94 69.75 28 5.38 No 47 1.07 Yes 0 0 No -42 0.49 No 49 94.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68362739 + NM_133509 RAD51B 0 . . . 7.86 90.12 38 5.67 Yes 60 0.72 No 0 0 No -38 0.81 Yes 38 73.24 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68618530 + NM_133509 RAD51B 0 . . . 0.84 58.62 33 6.85 Yes 3 -1.14 No 0 0 No -32 0.52 No 35 56.65 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68406330 + NM_133509 RAD51B 0 . . . 0.93 69.88 21 3.45 No 26 0.4 No 0 0 No -20 0.5 No 53 43.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68489454 + NM_133509 RAD51B 0 . . . 5.01 71.85 31 5.39 No 56 -4.94 No 0 0 No -26 0.81 Yes 34 70.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94177668 - NM_005591 MRE11 0 . . . 3.64 71.51 19 4.44 No 22 0.45 No 0 0 No -37 0.5 No 46 88.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94174629 - NM_005591 MRE11 0 . . . 8 78.31 29 4.31 No 27 1.77 Yes 0 0 No -20 0.8 Yes 35 84.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47806678 + NM_000251 MSH2 0 . . . 0.05 0 46 8.14 Yes 61 -4.59 No 0 0 No -31 0.44 No 27 41.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6025609 - NM_000535 PMS2 0 . . . 7.08 83.19 14 4.62 No NA NA NA 0 0 No -28 0.72 Yes 39 68.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23613041 - NM_024675 PALB2 0 . . . 3.86 84.79 17 4.02 No 50 0.44 No 0 0 No -27 0.52 No 46 48.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7583679 - NM_000546 TP53 0 . . . 5.94 69.81 35 6.4 Yes 5 0.06 No 0 0 No -35 0.73 Yes 53 91.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48031898 + NM_000179 MSH6 0 . . . 4.51 78.34 27 5.73 Yes 55 1.64 Yes 0 0 No -29 0.33 No 47 91.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37034340 + NM_000249 MLH1 0 . . . 1.4 0 32 5.63 Yes 6 1.86 Yes 0 0 No -28 0.66 No 52 85.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68519269 + NM_133509 RAD51B 0 . . . 2.6 0 37 7.49 Yes 53 0.89 Yes 0 0 No -36 0.86 Yes 32 53.72 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68832442 + NM_004360 CDH1 0 . . . 0.21 0 40 6.76 Yes 12 0.09 No 0 0 No -22 0.76 Yes 46 86.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68372013 + NM_133509 RAD51B 0 . . . 5.21 74.14 34 6.86 Yes 25 2.41 Yes 0 0 No -29 0.66 Yes 33 95.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68424686 + NM_133509 RAD51B 0 . . . 4.05 76.24 30 5.74 Yes 54 -4.52 No 0 0 No -21 0.5 No 47 48.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89705753 + NM_000314 PTEN 0 . . . 2.25 76.67 17 2.99 No 67 -5.49 No 0 0 No -26 0.45 No 43 27.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41263593 - NM_007294 BRCA1 0 . . . 3.06 70.85 28 8.33 Yes 21 1.76 Yes 0 0 No -27 0.54 No 37 79.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29116009 - NM_001005735 CHEK2 0 . . . 1.75 76.97 17 6.38 Yes 58 0.27 No 0 0 No -16 0.7 Yes 50 74.09 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68799443 + NM_133509 RAD51B 0 . . . 8.57 80.4 20 5.48 No 36 -1.53 No 0 0 No -22 0.49 No 42 48.16 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68909545 + NM_133509 RAD51B 0 . . . 2.07 72.45 22 7.25 Yes 38 1.92 Yes 0 0 No -26 0.84 Yes 20 63.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90969327 - NM_002485 NBN 0 . . . 0.98 83.24 14 5.29 No 56 0.91 Yes 0 0 No -23 0.55 No 51 45.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68742834 + NM_133509 RAD51B 0 . . . 5.24 78.93 32 7.35 Yes 58 0.61 No 0 0 No -31 0.87 Yes 48 43.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68622667 + NM_133509 RAD51B 0 . . . 1.55 60.59 19 4.67 No 36 0.45 No 0 0 No -33 0.61 No 43 68.62 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59802128 - NM_032043 BRIP1 0 . . . 4.3 72.05 16 5.83 Yes 24 0.66 No 0 0 No -28 0.65 No 49 70.57 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59812096 - NM_032043 BRIP1 0 . . . 2.09 0 38 7.62 Yes 68 -5.38 No 0 0 No -37 0.82 Yes 42 88.58 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68454694 + NM_133509 RAD51B 0 . . . 7.53 83.68 15 4.58 No 34 1.09 Yes 0 0 No -37 0.35 No 39 77.23 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190657562 + NM_000534 PMS1 0 . . . 2.53 0 19 3.77 No 58 1.07 Yes 0 0 No -38 0.62 No 36 53.48 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108220497 + NM_000051 ATM 0 . . . 7.48 80.62 30 5.66 Yes 61 -4.33 No 0 0 No -29 0.95 Yes 46 66.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131938889 + NM_005732 RAD50 0 . . . 0.15 59.75 21 5.74 Yes 21 0.44 No 0 0 No -20 0.8 Yes 34 58.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131894716 + NM_005732 RAD50 0 . . . 3.75 63 15 4.58 No 22 0.52 No 0 0 No -45 0.71 Yes 35 60.88 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68825444 + NM_004360 CDH1 0 . . . 1.65 81.72 31 5.25 No 33 1 Yes 0 0 No -19 0.61 No 50 89.57 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29133948 - NM_001005735 CHEK2 0 . . . 2.95 70.85 52 7.92 Yes 18 0.37 No 0 0 No -32 0.3 No 40 83.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6042002 - NM_000535 PMS2 0 . . . 4.74 90.82 23 4.93 No 57 0.75 No 0 0 No -28 0.57 No 48 95.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89698243 + NM_000314 PTEN 0 . . . 1.82 67.43 13 3.63 No 60 0.97 Yes 0 0 No -31 0.42 No 53 41.2 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75509918 - NM_001040108 MLH3 0 . . . 6.61 82.52 17 5.09 No 62 -5.26 No 0 0 No -23 0.46 No 43 93.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84399094 - NM_139076 FAM175A 0 . . . 5.5 71.61 43 5.52 No 35 0.64 No 0 0 No -20 0.44 No 49 80.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68865468 + NM_004360 CDH1 0 . . . 2.89 0 24 5.96 Yes 44 1.71 Yes 0 0 No -37 0.64 No 38 69.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68591788 + NM_133509 RAD51B 0 . . . 3.15 74.01 22 5.76 Yes 59 0.39 No 0 0 No -30 0.81 Yes 51 59.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108182984 + NM_000051 ATM 0 . . . 8.37 86.27 85 9.8 Yes 10 0.61 No 0 0 No -22 0.58 No 44 73.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59850301 - NM_032043 BRIP1 0 . . . 8.45 87.66 34 7.1 Yes 15 0.66 No 0 0 No -33 0.46 No 43 91.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68710417 + NM_133509 RAD51B 0 . . . 2.67 64.31 28 6.24 Yes -2 0.29 No 0 0 No -22 0.88 Yes 47 86.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47701716 + NM_000251 MSH2 0 . . . 0.47 80.63 20 5.03 No 33 0.48 No 0 0 No -19 0.3 No 25 69.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68377804 + NM_133509 RAD51B 0 . . . 3.49 0 58 7.56 Yes 19 0.81 Yes 0 0 No -22 0.58 No 39 85.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47736706 + NM_000251 MSH2 0 . . . 4.77 77.42 34 5.86 Yes 69 -1.71 No 0 0 No -22 0.8 Yes 54 40.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94152836 - NM_005591 MRE11 0 . . . 3.07 72.43 21 4.96 No 37 0.92 Yes 0 0 No -20 0.52 No 39 74.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59886830 - NM_032043 BRIP1 0 . . . 5.95 77.83 14 5.2 No 35 0.79 Yes 0 0 No -23 0.36 No 43 74.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69080868 + NM_133509 RAD51B 0 . . . 5.96 80.77 17 5.29 No 2 0.74 No 0 0 No -21 0.62 No 39 68.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32940839 + NM_000059 BRCA2 0 . . . 4.29 72.14 16 5.32 No 47 0.64 No 0 0 No -23 0.75 Yes 42 90.43 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69133654 + NM_133509 RAD51B 0 . . . 10.67 92.53 12 5.2 No 5 0.97 Yes 0 0 No -22 0.81 Yes 53 64.77 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59843500 - NM_032043 BRIP1 0 . . . 3.44 71.54 21 5.08 No 19 1.1 Yes 0 0 No -20 0.42 No 46 67.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68820256 + NM_004360 CDH1 0 . . . 5.35 85.02 15 3.71 No 71 0.04 No 0 0 No -26 0.65 No 43 71.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59777046 - NM_032043 BRIP1 0 . . . 1.26 0 17 4.8 No 15 0.72 No 0 0 No -60 0.36 No 43 58.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68329459 + NM_133509 RAD51B 0 . . . 4.65 83.11 22 5.1 No 68 -4.1 No 0 0 No -21 0.62 No 40 69.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69130699 + NM_133509 RAD51B 0 . . . 2.61 72.06 16 5.66 Yes 0 0.9 Yes 0 0 No -27 0.54 No 41 42.49 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68424359 + NM_133509 RAD51B 0 . . . 4.57 79.88 17 5.28 No 10 0.53 No 0 0 No -57 0.61 No 48 77.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68527490 + NM_133509 RAD51B 0 . . . 0.13 56.6 22 4.61 No 46 -3.52 No 0 0 No -21 0.71 Yes 53 57.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69114440 + NM_133509 RAD51B 0 . . . 5.94 90.22 29 5.92 Yes 21 1.06 Yes 0 0 No -28 0.72 Yes 37 54.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94160034 - NM_005591 MRE11 0 . . . 7.57 85.79 30 5.47 No 21 0.2 No 0 0 No -29 0.52 No 41 76.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108172133 + NM_000051 ATM 0 . . . 4.95 85.31 24 4.59 No 6 0.4 No 0 0 No -34 0.8 Yes 52 54.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47630541 + NM_000251 MSH2 0 . . . 1.22 71.54 16 4.36 No 25 -2.63 No 0 0 No -31 0.85 Yes 48 67.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68411508 + NM_133509 RAD51B 0 . . . 3.72 83.26 25 5.57 Yes 7 0.15 No 0 0 No -24 0.66 Yes 51 45.56 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32897728 + NM_000059 BRCA2 0 . . . 5.44 76.19 23 4.54 No 10 0.08 No 0 0 No -22 0.59 No 48 68.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69145163 + NM_133509 RAD51B 0 . . . 6.05 81.43 25 5.47 No 41 1.43 Yes 0 0 No -24 0.72 Yes 46 97.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190704964 + NM_000534 PMS1 0 . . . 0.59 72.46 21 5.18 No 73 -6.31 No 0 0 No -20 0.85 Yes 33 28.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56775895 + NM_058216 RAD51C 0 . . . 3.81 82.02 52 6.26 Yes 28 1.04 Yes 0 0 No -51 0.27 No 30 83.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68900287 + NM_133509 RAD51B 0 . . . 3.9 70.72 15 4.44 No 46 1.93 Yes 0 0 No -20 0.6 No 47 59.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59813155 - NM_032043 BRIP1 0 . . . 5.09 88.24 31 5.28 No 43 0.72 No 0 0 No -30 0.9 Yes 42 67.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68403118 + NM_133509 RAD51B 0 . . . 2.6 66.54 55 6.96 Yes 27 1.38 Yes 0 0 No -40 0.96 Yes 51 53.87 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69127702 + NM_133509 RAD51B 0 . . . 0.22 0 38 6.23 Yes 51 0.08 No 0 0 No -28 0.71 Yes 50 35.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152342813 - NM_005431 XRCC2 0 . . . 1.86 65.82 31 6.03 Yes 30 -1.99 No 0 0 No -33 0.73 Yes 42 87.44 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190710315 + NM_000534 PMS1 0 . . . 2.88 76.01 10 5.2 No 15 0.54 No 0 0 No -36 0.7 Yes 31 60.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23628553 - NM_024675 PALB2 0 . . . 3.34 69.12 18 6 Yes 55 0.41 No 0 0 No -18 0.49 No 32 96.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89648527 + NM_000314 PTEN 0 . . . 0.63 68.92 44 6.89 Yes 1 0.26 No 0 0 No -29 0.72 Yes 53 44.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68404398 + NM_133509 RAD51B 0 . . . 2.43 62.77 16 3.87 No 53 0.05 No 0 0 No -34 0.73 Yes 60 30.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68901112 + NM_133509 RAD51B 0 . . . 3.7 72.79 28 4.12 No 64 0.39 No 0 0 No -27 0.46 No 48 85.56 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32916703 + NM_000059 BRCA2 0 . . . 0.31 60 37 6.88 Yes 60 0.5 No 0 0 No -25 0.46 No 42 52.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6013036 - NM_000535 PMS2 0 . . . 7.61 83.58 27 5.39 No 21 -1.01 No 0 0 No -26 0.61 No 50 63.64 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29129939 - NM_001005735 CHEK2 0 . . . 7.81 82.4 20 5.57 Yes 55 -2.11 No 0 0 No -19 0.53 No 48 39.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68774749 + NM_004360 CDH1 0 . . . 2.72 72.82 12 4.12 No 61 0.59 No 0 0 No -38 0.4 No 45 50.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108186412 + NM_000051 ATM 0 . . . 4.42 74.47 32 4.8 No 71 -2.12 No 0 0 No -31 0.59 No 50 62.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68297303 + NM_133509 RAD51B 0 . . . 2.24 80.12 25 6.24 Yes 7 1.16 Yes 0 0 No -24 0.89 Yes 40 65.45 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68325668 + NM_133509 RAD51B 0 . . . 0.22 56.95 12 5 No 75 1.39 Yes 0 0 No -25 0.7 Yes 18 49.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131956771 + NM_005732 RAD50 0 . . . 6.15 76.27 29 5.56 Yes 25 0.09 No 0 0 No -28 0.79 Yes 45 88.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69068365 + NM_133509 RAD51B 0 . . . 2.71 77.87 45 4.82 No 37 0.99 Yes 0 0 No -31 0.3 No 21 64.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68836558 + NM_004360 CDH1 0 . . . 1.96 80.12 27 5.2 No 7 1.16 Yes 0 0 No -26 0.51 No 51 80.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59811862 - NM_032043 BRIP1 0 . . . 0.92 71.29 18 7.21 Yes 63 0.19 No 0 0 No -17 0.7 Yes 54 34.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94178264 - NM_005591 MRE11 0 . . . 3.67 66.82 24 5.42 No 1 1.29 Yes 0 0 No -27 0.57 No 52 61.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68711826 + NM_133509 RAD51B 0 . . . 9.89 86.52 24 5.41 No 23 1.25 Yes 0 0 No -23 0.64 No 47 82.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41013460 + NM_001164269 RAD51 0 . . . 3.99 0 18 5.45 No 29 0.45 No 0 0 No -17 0.44 No 52 69.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32936403 + NM_000059 BRCA2 0 . . . 0.21 74.88 35 6.09 Yes 66 1.29 Yes 0 0 No -23 0.58 No 53 63.53 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41224022 - NM_007294 BRCA1 0 . . . 0.75 83 27 6.63 Yes 32 0.74 No 0 0 No -26 0.72 Yes 37 69.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84393227 - NM_139076 FAM175A 0 . . . 5.01 91.83 30 4.67 No 60 0.61 No 0 0 No -25 0.75 Yes 48 58.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32949932 + NM_000059 BRCA2 0 . . . 3.6 76.89 30 4.84 No 57 1.12 Yes 0 0 No -22 0.91 Yes 52 49.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108241499 + NM_000051 ATM 0 . . . 1.82 70.89 13 5.14 No 22 0.54 No 0 0 No -41 0.52 No 36 77.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59926991 - NM_032043 BRIP1 0 . . . 3.94 81.76 33 5.66 Yes 9 0.05 No 0 0 No -25 0.38 No 48 68.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84384390 - NM_139076 FAM175A 0 . . . 0.42 74.73 22 5.19 No 36 1.25 Yes 0 0 No -21 0.75 Yes 22 80.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94181351 - NM_005591 MRE11 0 . . . 0.29 66.66 15 4.58 No 57 1.31 Yes 0 0 No -23 0.65 No 45 74.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68973554 + NM_133509 RAD51B 0 . . . 2.97 66.82 32 6.55 Yes 55 -1.38 No 0 0 No -31 0.87 Yes 30 71.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68428045 + NM_133509 RAD51B 0 . . . 8.43 91.6 36 7.47 Yes 37 -1.61 No 0 0 No -35 0.61 No 43 65.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41263648 - NM_007294 BRCA1 0 . . . 0.67 72.26 32 5.36 No 31 1.07 Yes 0 0 No -32 0.8 Yes 27 79.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 75515458 - NM_001040108 MLH3 0 . . . 3.3 77.42 25 4.8 No 74 -6.35 No 0 0 No -27 0.77 Yes 44 79.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56771370 + NM_058216 RAD51C 0 . . . 5.08 88.6 29 5.92 Yes 7 1.64 Yes 0 0 No -28 0.79 Yes 45 63.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89666578 + NM_000314 PTEN 0 . . . 2.7 79.2 26 6 Yes 23 0.23 No 0 0 No -25 0.71 Yes 49 86.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr4 84404357 - NM_139076 FAM175A 0 . . . 2.88 70 15 5.39 No 48 -3.85 No 0 0 No -26 0.58 No 45 25.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68531927 + NM_133509 RAD51B 0 . . . 1.29 0 18 4.84 No 72 0.43 No 0 0 No -28 0.56 No 50 84.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68924211 + NM_133509 RAD51B 0 . . . 1.73 69.79 14 5.29 No 71 -6 No 0 0 No -21 0.64 No 48 47.24 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68678532 + NM_133509 RAD51B 0 . . . 3.84 69.46 40 6.7 Yes -1 0.64 No 0 0 No -29 0.62 No 53 59.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68735648 + NM_133509 RAD51B 0 . . . 4.66 81.47 29 5.57 Yes 40 -1.17 No 0 0 No -26 0.57 No 30 82.98 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68762290 + NM_133509 RAD51B 0 . . . 1.27 88.64 50 7.23 Yes 27 1.01 Yes 0 0 No -22 0.54 No 46 82.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68435178 + NM_133509 RAD51B 0 . . . 2.69 77.39 25 5.57 Yes 33 1.07 Yes 0 0 No -24 0.79 Yes 25 70.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68899374 + NM_133509 RAD51B 0 . . . 3.69 70.47 13 4.36 No 14 0.41 No 0 0 No -35 0.9 Yes 44 76.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59763065 - NM_032043 BRIP1 0 . . . 0.07 63.95 14 4.1 No 58 0.38 No 0 0 No -22 0.55 No 46 73.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47791947 + NM_000251 MSH2 0 . . . 1.17 76.06 18 6.07 Yes 27 1.19 Yes 0 0 No -31 0.55 No 31 69.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47636764 + NM_000251 MSH2 0 . . . 3.92 70.85 34 6.08 Yes 21 1.71 Yes 0 0 No -23 0.61 No 37 70.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23637879 - NM_024675 PALB2 0 . . . 2.91 0 30 5.83 Yes 4 0.23 No 0 0 No -21 0.51 No 54 34.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105182117 + NM_021930 RINT1 0 . . . 5.3 83.82 27 6.32 Yes 73 1.1 Yes 0 0 No -33 0.41 No 39 72.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69093700 + NM_133509 RAD51B 0 . . . 6.22 73.52 18 5.71 Yes 63 0.42 No 0 0 No -33 0.72 Yes 45 46.35 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68805988 + NM_133509 RAD51B 0 . . . 2.63 83.09 20 5.22 No 18 -2.22 No 0 0 No -19 0.76 Yes 44 64.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68834633 + NM_004360 CDH1 0 . . . 5.15 86.01 12 4.69 No 53 0.3 No 0 0 No -51 0.78 Yes 53 77.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94209455 - NM_005591 MRE11 0 . . . 2.69 0 22 3.91 No 13 0.85 Yes 0 0 No -22 0.56 No 44 66.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68526184 + NM_133509 RAD51B 0 . . . 3.95 60.71 24 5.02 No 52 1.86 Yes 0 0 No -23 0.92 Yes 28 55.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68607529 + NM_133509 RAD51B 0 . . . 3.1 75.24 32 6.6 Yes 30 0.87 Yes 0 0 No -31 0.75 Yes 24 77.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59793847 - NM_032043 BRIP1 0 . . . 3.72 68.88 44 5.83 Yes 12 0.41 No 0 0 No -33 0.79 Yes 40 39.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94195047 - NM_005591 MRE11 0 . . . 5.5 81.39 20 5.1 No 33 1.36 Yes 0 0 No -19 0.6 No 13 39.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47710176 + NM_000251 MSH2 0 . . . 7.21 77.95 55 7.61 Yes 3 1.75 Yes 0 0 No -22 0.65 No 41 70.72 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215676060 - NM_000465 BARD1 0 . . . 1.35 65.62 33 6 Yes 29 1.05 Yes 0 0 No -58 0.37 No 47 30.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32931392 + NM_000059 BRCA2 0 . . . 1.46 69.61 39 7.07 Yes 68 -5.37 No 0 0 No -23 0.56 No 45 41.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84392922 - NM_139076 FAM175A 0 . . . 1.08 84.22 30 4.63 No 68 -3.1 No 0 0 No -29 0.88 Yes 51 36.23 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94185154 - NM_005591 MRE11 0 . . . 7.32 79.69 62 7.06 Yes 58 1.02 Yes 0 0 No -33 0.77 Yes 54 64.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47668456 + NM_000251 MSH2 0 . . . 5.76 70.39 18 6.83 Yes 70 1.45 Yes 0 0 No -28 0.24 No 34 82.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69063777 + NM_133509 RAD51B 0 . . . 1.58 76.27 27 5.2 No 2 -0.99 No 0 0 No -26 0.48 No 30 82.79 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68544518 + NM_133509 RAD51B 0 . . . 1.82 64.36 63 8.72 Yes 24 0.81 Yes 0 0 No -23 0.61 No 38 31.06 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94172924 - NM_005591 MRE11 0 . . . 9.56 85.35 18 4.57 No 70 1.77 Yes 0 0 No -17 0.24 No 46 61.18 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108183257 + NM_000051 ATM 0 . . . 2.88 79.69 27 5.2 No 59 -2.94 No 0 0 No -26 0.58 No 44 68.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23644251 - NM_024675 PALB2 0 . . . 3.99 92.4 19 5.72 Yes 4 1.04 Yes 0 0 No -26 0.41 No 45 70.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68708868 + NM_133509 RAD51B 0 . . . 4.93 85.37 23 5.29 No 16 0.85 Yes 0 0 No -22 0.65 No 42 80.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7563566 - NM_000546 TP53 0 . . . 4.45 71.01 52 7.09 Yes 23 0.64 No 0 0 No -31 0.47 No 35 44.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21967269 - NM_000077 CDKN2A 0 . . . 7.63 83.2 47 5.68 Yes 75 -3.69 No 0 0 No -27 0.86 Yes 47 44.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68786330 + NM_133509 RAD51B 0 . . . 2.5 68.16 18 5.29 No 50 0.92 Yes 0 0 No -27 0.43 No 50 32.22 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68317228 + NM_133509 RAD51B 0 . . . 0.2 62.07 14 3.87 No 5 -1.07 No 0 0 No -26 0.72 Yes 24 26.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47740307 + NM_000251 MSH2 0 . . . 3.79 68.25 13 4.84 No 46 -2.56 No 0 0 No -30 0.48 No 49 54.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59850601 - NM_032043 BRIP1 0 . . . 2.24 67.26 34 4.75 No 73 0.06 No 0 0 No -33 0.66 No 39 83.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68848535 + NM_004360 CDH1 0 . . . 1.89 0 27 5.48 No 4 0.32 No 0 0 No -26 0.78 Yes 44 48.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152360811 - NM_005431 XRCC2 0 . . . 0.09 0 35 5.61 Yes 45 1.12 Yes 0 0 No -30 0.51 No 38 82.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69139518 + NM_133509 RAD51B 0 . . . 2.18 76.85 29 5.92 Yes 34 0.38 No 0 0 No -28 0.68 Yes 44 63.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59815958 - NM_032043 BRIP1 0 . . . 1.75 76.11 22 5.29 No 21 1.16 Yes 0 0 No -21 0.84 Yes 52 44.13 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56809070 + NM_058216 RAD51C 0 . . . 2.38 75.25 14 4.21 No 52 1.09 Yes 0 0 No -56 0.54 No 45 19.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68782419 + NM_004360 CDH1 0 . . . 4.15 69.29 25 5.1 No 16 -2.87 No 0 0 No -24 0.92 Yes 14 92.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69096691 + NM_133509 RAD51B 0 . . . 8.6 78.83 25 5.25 No 66 -3.48 No 0 0 No -24 0.66 No 48 57.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41248367 - NM_007294 BRCA1 0 . . . 3.75 84.95 34 5.73 Yes 58 2.19 Yes 0 0 No -34 0.41 No 44 22.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68969438 + NM_133509 RAD51B 0 . . . 1.02 69.48 18 4.69 No 65 -4.2 No 0 0 No -41 0.69 Yes 41 52.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68830315 + NM_004360 CDH1 0 . . . 1.01 57.05 18 4.44 No 57 0.41 No 0 0 No -22 0.5 No 40 48.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59826308 - NM_032043 BRIP1 0 . . . 1.89 72.26 14 5.1 No 30 1.19 Yes 0 0 No -13 0.39 No 28 68.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190727609 + NM_000534 PMS1 0 . . . 4.01 77.16 49 6.19 Yes 2 0.66 No 0 0 No -37 0.48 No 51 82.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68926259 + NM_133509 RAD51B 0 . . . 9.47 89.49 28 5.37 No 0 0.3 No 0 0 No -27 0.69 Yes 41 93.22 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69135796 + NM_133509 RAD51B 0 . . . 0.27 64.43 32 5.82 Yes 1 0.14 No 0 0 No -31 0.94 Yes 42 68.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89673094 + NM_000314 PTEN 0 . . . 2.69 71.7 29 4.61 No 25 0.95 Yes 0 0 No -28 0.66 No 17 67.66 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68439673 + NM_133509 RAD51B 0 . . . 4.38 73.09 39 5.63 Yes 36 1.12 Yes 0 0 No -24 0.87 Yes 45 80.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59904168 - NM_032043 BRIP1 0 . . . 3.43 73.46 31 6.4 Yes 8 1.01 Yes 0 0 No -30 0.77 Yes 50 56.47 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152373602 - NM_005431 XRCC2 0 . . . 11.05 93.99 34 6.46 Yes 70 -1.94 No 0 0 No -24 0.64 No 45 63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40987656 + NM_001164269 RAD51 0 . . . 0.17 77.26 58 7.81 Yes 68 -5 No 26 0.78 Yes -57 0.53 No 48 55.61 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr2 215627494 - NM_000465 BARD1 0 . . . 0.79 60.66 27 7.06 Yes 75 0.62 No 0 0 No -25 0.48 No 11 56.17 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90987651 - NM_002485 NBN 0 . . . 3.48 77.34 37 5.4 No 32 0.64 No 0 0 No -27 0.43 No 45 57.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215593145 - NM_000465 BARD1 0 . . . 10.27 90.54 19 5 No 4 0.2 No 0 0 No -24 0.65 No 47 68.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94161864 - NM_005591 MRE11 0 . . . 4.66 78.39 21 5 No 5 0.96 Yes 0 0 No -20 0.92 Yes 53 65.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr15 41007440 + NM_001164269 RAD51 0 . . . 0.59 74.68 14 4.47 No 36 -2.6 No 0 0 No -18 0.43 No 36 53.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68836164 + NM_004360 CDH1 0 . . . 0.45 65.3 35 5.81 Yes 74 0.69 No 0 0 No -34 0.85 Yes 45 49.42 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89683660 + NM_000314 PTEN 0 . . . 4.71 73.67 44 5.2 No 72 1.25 Yes 0 0 No -43 0.34 No 22 40.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32962563 + NM_000059 BRCA2 0 . . . 2.37 0 31 5.66 Yes 67 0.76 No 0 0 No -30 0.79 Yes 52 37.46 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131968331 + NM_005732 RAD50 0 . . . 5.25 79.96 50 8.8 Yes 51 0.44 No 0 0 No -37 0.75 Yes 43 30.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89685745 + NM_000314 PTEN 0 . . . 0.47 61.79 13 4.8 No 5 0.69 No 0 0 No -58 0.69 Yes 53 85.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59911993 - NM_032043 BRIP1 0 . . . 3.37 78.09 28 7.74 Yes -3 1 Yes 0 0 No -35 0.71 Yes 51 76.33 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr1 45800537 - NM_001048171 MUTYH 0 . . . 5.93 82.08 37 6.4 Yes 23 0.19 No 0 0 No -36 0.85 Yes 47 30.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131895817 + NM_005732 RAD50 0 . . . 5.01 74.72 20 5.1 No 2 0.34 No 0 0 No -20 0.48 No 47 40.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89709395 + NM_000314 PTEN 0 . . . 6.1 75.81 14 4.47 No 8 0.5 No 0 0 No -26 0.35 No 50 51.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68510695 + NM_133509 RAD51B 0 . . . 1.94 74.13 13 4.15 No 0 0.55 No 0 0 No -23 0.7 Yes 51 32.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68503105 + NM_133509 RAD51B 0 . . . 4.78 81.18 25 5.78 Yes 57 1.38 Yes 0 0 No -24 0.7 Yes 50 81.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32938800 + NM_000059 BRCA2 0 . . . 3.31 76.56 29 6.13 Yes 71 0.81 Yes 0 0 No -23 0.54 No 47 58.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6013544 - NM_000535 PMS2 0 . . . 1.08 66.39 17 4.69 No -3 0.74 No 0 0 No -21 0.31 No 47 49.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59891979 - NM_032043 BRIP1 0 . . . 0.5 76.04 31 5.74 Yes 1 -1.63 No 0 0 No -30 0.75 Yes 39 76.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68807937 + NM_004360 CDH1 0 . . . 2.3 83.65 18 7.35 Yes 32 0.97 Yes 0 0 No -23 0.4 No 50 61.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68476067 + NM_133509 RAD51B 0 . . . 7.62 79.86 23 4.77 No -3 0.42 No 0 0 No -22 0.57 No 46 40.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47705901 + NM_000251 MSH2 0 . . . 5.8 86.06 17 5.33 No 22 0.45 No 0 0 No -29 0.29 No 36 76.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68491293 + NM_133509 RAD51B 0 . . . 5.75 77.66 34 7.68 Yes 58 1.19 Yes 0 0 No -33 0.79 Yes 31 94.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23636751 - NM_024675 PALB2 0 . . . 0.55 78.4 25 3.84 No 7 0.48 No 0 0 No -24 0.94 Yes 50 86.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68385162 + NM_133509 RAD51B 0 . . . 0.42 74.73 29 5.7 Yes 33 1.16 Yes 0 0 No -28 0.67 Yes 14 56.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41266552 - NM_007294 BRCA1 0 . . . 4.15 71.96 18 5.64 Yes 75 0.79 Yes 0 0 No -27 0.54 No 44 92.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47714699 + NM_000251 MSH2 0 . . . 2.21 79.87 31 6 Yes 22 0.44 No 0 0 No -30 0.61 No 46 43.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152343223 - NM_005431 XRCC2 0 . . . 3.13 75.36 40 6.66 Yes 27 0.42 No 0 0 No -19 0.4 No 31 77.56 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215654902 - NM_000465 BARD1 0 . . . 1.9 81.15 21 4.9 No 14 1 Yes 0 0 No -20 0.93 Yes 44 76.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68717363 + NM_133509 RAD51B 0 . . . 2.48 76.55 20 5.57 Yes 17 0.21 No 0 0 No -19 0.57 No 41 34.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131933924 + NM_005732 RAD50 0 . . . 5.5 85.02 17 5.38 No 7 1.29 Yes 0 0 No -20 0.55 No 51 87.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68303227 + NM_133509 RAD51B 0 . . . 3.01 0 31 5.92 Yes 48 0.29 No 0 0 No -30 0.57 No 42 79.89 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29127906 - NM_001005735 CHEK2 0 . . . 7.34 88.01 22 4.79 No 50 0.45 No 0 0 No -22 0.43 No 48 30.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23652525 - NM_024675 PALB2 0 . . . 5.71 77.78 43 8.11 Yes 66 0.05 No 0 0 No -42 0.92 Yes 49 70.28 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68989403 + NM_133509 RAD51B 0 . . . 2.34 0 23 5.1 No 37 0.99 Yes 0 0 No -22 0.49 No 51 36.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68816887 + NM_004360 CDH1 0 . . . 3.29 68.85 44 6.73 Yes 66 -4.4 No 0 0 No -40 0.51 No 50 62.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59872263 - NM_032043 BRIP1 0 . . . 2.74 75.19 16 3.96 No 12 1.54 Yes 0 0 No -27 0.3 No 46 92.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41233159 - NM_007294 BRCA1 0 . . . 0.53 65.2 18 5.64 Yes 37 0.85 Yes 0 0 No -29 0.92 Yes 48 52.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68795294 + NM_004360 CDH1 0 . . . 3.97 0 26 4.81 No 2 0.63 No 0 0 No -25 0.71 Yes 35 72.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68511236 + NM_133509 RAD51B 0 . . . 0.42 0 34 5.84 Yes 38 1.41 Yes 0 0 No -28 0.41 No 49 52.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68532660 + NM_133509 RAD51B 0 . . . 3.04 77.82 41 4.75 No 71 -5.38 No 0 0 No -38 0.46 No 39 33.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94190899 - NM_005591 MRE11 0 . . . 0.92 78.23 27 6.89 Yes 20 1.12 Yes 0 0 No -26 0.74 Yes 33 37.54 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68597199 + NM_133509 RAD51B 0 . . . 6.86 81.22 33 5.83 Yes 68 -4.79 No 0 0 No -32 0.81 Yes 51 64.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47668960 + NM_000251 MSH2 0 . . . 2.29 68.95 10 5 No 16 1.13 Yes 0 0 No -18 0.19 No 42 93.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68620211 + NM_133509 RAD51B 0 . . . 6.23 74.54 17 4.59 No 44 1 Yes 0 0 No -17 0.32 No 40 73.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68771921 + NM_133509 RAD51B 0 . . . 0.9 74.92 34 4.44 No 64 0.95 Yes 0 0 No -31 0.28 No 44 66.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47628744 + NM_000251 MSH2 0 . . . 2.29 0 16 3.86 No -1 0.25 No 0 0 No -27 0.87 Yes 32 28.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41229212 - NM_007294 BRCA1 0 . . . 7.47 74.54 30 5.38 No 62 -1.4 No 0 0 No -29 0.62 No 30 49.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108125704 + NM_000051 ATM 0 . . . 6.7 81.72 20 4.47 No 15 1.1 Yes 0 0 No -19 0.9 Yes 43 90.57 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68765887 + NM_133509 RAD51B 0 . . . 7.86 75.23 25 5.94 Yes 53 -0.83 No 0 0 No -24 0.71 Yes 48 64.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 75504408 - NM_001040108 MLH3 0 . . . 8.49 81.27 27 4.42 No 19 0.66 No 0 0 No -26 0.84 Yes 38 91.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105177515 + NM_021930 RINT1 0 . . . 2.12 72.57 50 4.83 No 52 1.51 Yes 0 0 No -36 0.5 No 48 84.68 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69038300 + NM_133509 RAD51B 0 . . . 13.47 90.3 43 6.39 Yes 26 1.96 Yes 0 0 No -27 0.75 Yes 32 93.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59823508 - NM_032043 BRIP1 0 . . . 7.38 84.77 24 6.06 Yes 4 1.74 Yes 0 0 No -23 0.93 Yes 42 77.82 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68605860 + NM_133509 RAD51B 0 . . . 3.73 75.76 28 6.57 Yes 23 0.21 No 0 0 No -27 0.76 Yes 50 51.97 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32955372 + NM_000059 BRCA2 0 . . . 0.18 63.77 36 5.7 Yes 67 0.87 Yes 0 0 No -31 0.9 Yes 54 46.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68390036 + NM_133509 RAD51B 0 . . . 4.74 84.41 21 4.51 No 37 0.54 No 0 0 No -20 0.71 Yes 21 76.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215606474 - NM_000465 BARD1 0 . . . 4.12 82.95 15 5.43 No 62 -5.24 No 0 0 No -28 0.46 No 48 51.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68759118 + NM_133509 RAD51B 0 . . . 2.74 74.21 23 6.54 Yes 52 0.98 Yes 0 0 No -26 0.72 Yes 56 40.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68682112 + NM_133509 RAD51B 0 . . . 7.5 83.13 32 5.81 Yes 46 0.64 No 0 0 No -29 0.77 Yes 45 62.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108095373 + NM_000051 ATM 0 . . . 4.02 77.65 19 4.59 No 5 0.91 Yes 0 0 No -55 0.75 Yes 53 53.76 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59891630 - NM_032043 BRIP1 0 . . . 4.68 72.28 25 5.46 No 51 0.85 Yes 0 0 No -24 0.95 Yes 25 82.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56775731 + NM_058216 RAD51C 0 . . . 4.02 80.12 28 5.2 No 10 1.12 Yes 0 0 No -27 0.91 Yes 48 87.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47682759 + NM_000251 MSH2 0 . . . 1.53 67.72 19 5 No 48 0.08 No 0 0 No -35 0.43 No 42 74.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45807455 - NM_001048171 MUTYH 0 . . . 1.77 63.03 17 4.91 No 59 -4.3 No 0 0 No -26 0.77 Yes 49 41.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56813088 + NM_058216 RAD51C 0 . . . 2.59 76.23 22 4.8 No 41 0.77 No 0 0 No -21 0.65 No 17 74.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68310736 + NM_133509 RAD51B 0 . . . 6.35 67.65 17 5.2 No 13 0.42 No 0 0 No -24 0.73 Yes 37 77.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89687912 + NM_000314 PTEN 0 . . . 4.43 72.09 22 5.25 No 46 0.35 No 0 0 No -25 0.72 Yes 40 71.63 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68307545 + NM_133509 RAD51B 0 . . . 7.12 88.56 23 4.79 No 12 1.25 Yes 0 0 No -47 0.49 No 46 54.81 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215623788 - NM_000465 BARD1 0 . . . 6.96 73.85 32 5.66 Yes 12 0.85 Yes 0 0 No -31 0.81 Yes 46 62.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1208493 + NM_000455 STK11 0 . . . 5.72 79.49 16 5.38 No 76 0.85 Yes 0 0 No -27 0.64 No 49 51.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68849800 + NM_133509 RAD51B 0 . . . 0.61 71.43 27 5.69 Yes 69 0.62 No 0 0 No -26 0.52 No 33 67.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68880673 + NM_133509 RAD51B 0 . . . 1.25 66.06 18 4.67 No 35 0.22 No 0 0 No -22 0.6 No 46 48.55 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152371204 - NM_005431 XRCC2 0 . . . 0.49 56.7 53 7.68 Yes 37 -2.2 No 0 0 No -38 0.6 No 21 50.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68584778 + NM_133509 RAD51B 0 . . . 6.98 76.81 22 6.85 Yes 23 2.7 Yes 0 0 No -21 0.96 Yes 35 93.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69146061 + NM_133509 RAD51B 0 . . . 1.47 62.42 24 4.83 No 74 -6.53 No 0 0 No -21 0.58 No 42 60.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68506367 + NM_133509 RAD51B 0 . . . 0.05 0 32 6.87 Yes 12 0.64 No 0 0 No -31 0.5 No 27 47.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68780851 + NM_133509 RAD51B 0 . . . 6.67 89.79 23 5.29 No 34 0.85 Yes 0 0 No -23 0.64 No 48 86.45 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1208351 + NM_000455 STK11 0 . . . 7.04 88.99 34 4.62 No 72 1.87 Yes 0 0 No -28 0.29 No 17 95.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 6016549 - NM_000535 PMS2 0 . . . 4.85 71.09 25 5.57 Yes 20 1 Yes 0 0 No -24 0.74 Yes 38 57.84 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68714965 + NM_133509 RAD51B 0 . . . 2.69 0 12 4.11 No 42 0.63 No 0 0 No -55 0.4 No 49 72.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23650661 - NM_024675 PALB2 0 . . . 1.47 74.73 13 4.36 No 33 0.75 No 0 0 No -34 0.6 No 14 40.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59895501 - NM_032043 BRIP1 0 . . . 0.43 65.23 21 4.89 No 36 -4.41 No 0 0 No -20 0.68 Yes 48 23.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68642357 + NM_133509 RAD51B 0 . . . 6.06 82.54 28 4.33 No 35 0.94 Yes 0 0 No -27 0.46 No 39 97.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68793413 + NM_004360 CDH1 0 . . . 1.96 83.84 32 5.93 Yes 68 -2.37 No 0 0 No -27 0.44 No 32 69.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68599004 + NM_133509 RAD51B 0 . . . 1.93 65.69 15 4.74 No 26 0.49 No 0 0 No -26 0.6 No 41 84.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 75504740 - NM_001040108 MLH3 0 . . . 3.82 69.79 36 6.16 Yes 59 0.16 No 0 0 No -35 0.62 No 42 61.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59848995 - NM_032043 BRIP1 0 . . . 6.4 85.23 42 6.68 Yes 30 0.89 Yes 0 0 No -30 0.33 No 49 46.85 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94150431 - NM_005591 MRE11 0 . . . 1.52 67.53 21 5 No 32 -3.45 No 0 0 No -20 0.56 No 42 37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68558386 + NM_133509 RAD51B 0 . . . 4.77 66.17 26 5.64 Yes 1 0.06 No 0 0 No -20 0.56 No 23 80.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68774858 + NM_133509 RAD51B 0 . . . 3.08 64.14 15 4.58 No 55 -1.22 No 0 0 No -40 0.66 No 32 69.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69068770 + NM_133509 RAD51B 0 . . . 4.69 76.9 23 5.2 No 34 -0.3 No 0 0 No -54 0.58 No 24 72.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68638281 + NM_133509 RAD51B 0 . . . 2.41 68.34 24 5.46 No 23 1.56 Yes 0 0 No -23 0.81 Yes 45 61.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68643763 + NM_133509 RAD51B 0 . . . 2.66 82.16 24 5.31 No 75 1.15 Yes 0 0 No -23 0.9 Yes 47 57.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68594676 + NM_133509 RAD51B 0 . . . 0.21 0 24 4.9 No 39 -1.12 No 0 0 No -23 0.34 No 30 60.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108156320 + NM_000051 ATM 0 . . . 2.51 67.26 25 4.81 No 63 1.04 Yes 0 0 No -24 0.48 No 49 77.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104164259 - NM_001100119 XRCC3 0 . . . 1.8 78.1 26 5.29 No 20 -1.43 No 0 0 No -25 0.93 Yes 38 93.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47756298 + NM_000251 MSH2 0 . . . 1.14 70.24 10 4 No 68 1.18 Yes 0 0 No -31 0.66 No 42 21.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32920396 + NM_000059 BRCA2 0 . . . 5.74 77.9 10 4 No 76 0.87 Yes 0 0 No -36 0.76 Yes 48 66.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94183007 - NM_005591 MRE11 0 . . . 5.97 82.79 30 6.37 Yes 21 0.32 No 0 0 No -36 0.73 Yes 42 36.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108155029 + NM_000051 ATM 0 . . . 2.69 76.05 64 9.34 Yes 45 0.5 No 0 0 No -29 0.21 No 44 48.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68931977 + NM_133509 RAD51B 0 . . . 4.64 82.2 45 5.91 Yes 36 0.49 No 0 0 No -44 0.6 No 45 68.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68670453 + NM_133509 RAD51B 0 . . . 2.76 62.89 21 4.54 No 74 0.45 No 0 0 No -20 0.77 Yes 41 76.46 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69034646 + NM_133509 RAD51B 0 . . . 2.29 61.31 24 6.71 Yes 1 0.58 No 0 0 No -23 0.78 Yes 50 48.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89646708 + NM_000314 PTEN 0 . . . 6.26 73.46 19 5.14 No 13 1.23 Yes 0 0 No -28 0.5 No 39 68.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47692285 + NM_000251 MSH2 0 . . . 5.44 80.94 30 6 Yes -1 0.56 No 0 0 No -29 0.86 Yes 44 43.52 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94224857 - NM_005591 MRE11 0 . . . 6.26 75.8 27 5.1 No 27 0.84 Yes 0 0 No -26 0.48 No 50 49.12 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131954705 + NM_005732 RAD50 0 . . . 5.42 74.32 27 6.17 Yes 17 0.32 No 0 0 No -26 0.87 Yes 41 72.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104172539 - NM_001100119 XRCC3 0 . . . 0.61 0 31 5.83 Yes 10 1.45 Yes 0 0 No -30 0.92 Yes 48 53.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21972958 - NM_000077 CDKN2A 0 . . . 2.38 60.7 14 6.23 Yes 68 0.76 No 0 0 No -23 0.73 Yes 50 40.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108182665 + NM_000051 ATM 0 . . . 6.45 68.39 16 6.73 Yes 5 1.45 Yes 0 0 No -54 0.72 Yes 47 85.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47775291 + NM_000251 MSH2 0 . . . 1.5 0 25 7.02 Yes 15 1 Yes 0 0 No -24 0.83 Yes 43 37.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190699690 + NM_000534 PMS1 0 . . . 3.03 76.08 17 6.32 Yes 26 1.44 Yes 0 0 No -26 0.68 Yes 56 48.58 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68981698 + NM_133509 RAD51B 0 . . . 4.27 80.17 40 6.74 Yes 16 0.75 No 0 0 No -39 0.89 Yes 42 70.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59760032 - NM_032043 BRIP1 0 . . . 0.84 61.71 35 5.23 No 26 0.42 No 0 0 No -25 0.75 Yes 46 73.14 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41265840 - NM_007294 BRCA1 0 . . . 1.34 83.52 42 4.1 No 28 1.29 Yes 0 0 No -25 0.59 No 50 76.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41262320 - NM_007294 BRCA1 0 . . . 0.38 73.45 19 5 No 55 1.42 Yes 0 0 No -47 0.47 No 51 55.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68346897 + NM_133509 RAD51B 0 . . . 0.5 60.37 13 4.26 No 19 -3 No 0 0 No -19 0.45 No 63 38.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68967422 + NM_133509 RAD51B 0 . . . 4.82 82.67 32 4.26 No 64 0.57 No 0 0 No -21 0.61 No 49 52.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37088479 + NM_000249 MLH1 0 . . . 1.75 68.79 34 6.9 Yes 11 0.61 No 0 0 No -33 0.73 Yes 47 67.83 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47741794 + NM_000251 MSH2 0 . . . 1 73.4 18 4.89 No 71 1.13 Yes 0 0 No -17 0.47 No 44 8.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68860517 + NM_004360 CDH1 0 . . . 0.26 50.34 18 4.8 No 73 -2.84 No 0 0 No -16 0.32 No 38 55.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108140908 + NM_000051 ATM 0 . . . 4 77.59 21 5.15 No 76 0.01 No 0 0 No -28 0.76 Yes 44 64.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68540843 + NM_133509 RAD51B 0 . . . 4.95 75.2 14 4.47 No 4 0.36 No 0 0 No -19 0.58 No 43 92.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59931081 - NM_032043 BRIP1 0 . . . 2.27 65.55 16 4.85 No 25 0.55 No 0 0 No -20 0.81 Yes 45 54.36 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94210781 - NM_005591 MRE11 0 . . . 3.96 77.54 67 7.85 Yes 53 1.5 Yes 0 0 No -31 0.37 No 49 78.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21969478 - NM_000077 CDKN2A 0 . . . 1.76 63.67 22 5.74 Yes 61 0.66 No 0 0 No -21 0.9 Yes 46 31.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131936790 + NM_005732 RAD50 0 . . . 1.3 66.46 29 4.24 No 16 0.95 Yes 0 0 No -31 0.64 No 42 89.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48031586 + NM_000179 MSH6 0 . . . 4.46 77.97 9 4.27 No 65 -3.15 No 0 0 No -50 0.23 No 44 59.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68554248 + NM_133509 RAD51B 0 . . . 4.19 72.91 16 4.62 No 64 -2.89 No 0 0 No -29 0.49 No 42 95.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68948236 + NM_133509 RAD51B 0 . . . 1.88 74.35 19 6.4 Yes 7 -0.45 No 0 0 No -18 0.65 No 51 51.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68447132 + NM_133509 RAD51B 0 . . . 6.03 84.31 34 6.24 Yes 15 0.06 No 0 0 No -23 0.56 No 50 43.47 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89622720 + NM_000314 PTEN 0 . . . 3.18 78.06 17 4.54 No -3 0.02 No 0 0 No -19 0.51 No 34 59.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59756029 - NM_032043 BRIP1 0 . . . 2.47 81.23 18 3.95 No 51 0.56 No 0 0 No -26 0.55 No 38 14.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75517454 - NM_001040108 MLH3 0 . . . 4.06 79.14 18 4.29 No 49 -2.01 No 0 0 No -17 0.55 No 47 62.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105198628 + NM_021930 RINT1 0 . . . 0.24 74.68 28 5.54 No 33 0.65 No 0 0 No -32 0.7 Yes 42 61.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68791254 + NM_133509 RAD51B 0 . . . 4.97 74.81 22 4.8 No 14 0.35 No 0 0 No -21 0.86 Yes 44 82.56 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68289682 + NM_133509 RAD51B 0 . . . 2.04 87.93 25 5.39 No -2 0.72 No 0 0 No -24 0.67 Yes 45 44.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190666178 + NM_000534 PMS1 0 . . . 2.71 71.93 23 5.6 Yes 14 1.44 Yes 0 0 No -59 0.44 No 44 86.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68851231 + NM_004360 CDH1 0 . . . 5 77.43 44 7.29 Yes 25 -0.85 No 0 0 No -29 0.79 Yes 53 44.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47804494 + NM_000251 MSH2 0 . . . 0.92 67.4 14 4.12 No 33 0.95 Yes 0 0 No -27 0.47 No 32 70.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47766293 + NM_000251 MSH2 0 . . . 7.48 78.46 29 4.23 No 28 0.66 No 0 0 No -29 0.87 Yes 49 48.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108151992 + NM_000051 ATM 0 . . . 0.47 67.49 33 6.54 Yes 5 0.81 Yes 0 0 No -26 0.57 No 53 67.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190729685 + NM_000534 PMS1 0 . . . 2.41 77.82 51 5.82 Yes 49 0.88 Yes 0 0 No -24 0.54 No 53 52.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89663771 + NM_000314 PTEN 0 . . . 10.15 89.4 38 6.59 Yes 33 0.79 Yes 0 0 No -32 0.45 No 41 75.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47765272 + NM_000251 MSH2 0 . . . 2.09 79.3 23 4.83 No 21 0.08 No 0 0 No -22 0.97 Yes 48 72.16 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29123807 - NM_001005735 CHEK2 0 . . . 5.09 71.73 16 5.17 No 45 0.31 No 0 0 No -23 0.3 No 38 73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59843929 - NM_032043 BRIP1 0 . . . 7.29 78.39 15 5.34 No -2 0.68 No 0 0 No -28 0.62 No 43 85.39 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215671755 - NM_000465 BARD1 0 . . . 5.68 85.53 23 5.2 No 76 0.5 No 0 0 No -46 0.72 Yes 41 59.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94195855 - NM_005591 MRE11 0 . . . 3.8 75.75 24 4.59 No 74 0.36 No 0 0 No -23 0.96 Yes 51 42.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190684538 + NM_000534 PMS1 0 . . . 8.91 91.53 28 5.55 No 59 0.48 No 0 0 No -27 0.88 Yes 47 65.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68749948 + NM_133509 RAD51B 0 . . . 0.82 56.61 25 5.39 No 64 -5.53 No 0 0 No -22 0.72 Yes 50 35.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68629088 + NM_133509 RAD51B 0 . . . 5 78.77 15 3.86 No 47 0.71 No 0 0 No -24 0.67 Yes 38 56.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131966316 + NM_005732 RAD50 0 . . . 4.6 78.35 49 7.68 Yes 11 0.52 No 0 0 No -38 0.82 Yes 40 66.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47798795 + NM_000251 MSH2 0 . . . 0.65 70.9 25 5.39 No NA NA NA 0 0 No -22 0.77 Yes 58 18.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48017582 + NM_000179 MSH6 0 . . . 0.93 71.65 41 6.63 Yes 55 0.88 Yes 0 0 No -44 0.83 Yes 52 42.42 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6043018 - NM_000535 PMS2 0 . . . 9.19 83.32 55 7.35 Yes 58 1.03 Yes 0 0 No -54 0.59 No 42 86.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 48010505 + NM_000179 MSH6 0 . . . 10.27 89.95 18 5.66 Yes 38 0.67 No 0 0 No -29 0.43 No 20 54.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89713956 + NM_000314 PTEN 0 . . . 0.69 0 21 5.73 Yes 61 -4.08 No 0 0 No -26 0.47 No 39 46.81 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183458 - NM_005591 MRE11 0 . . . 4.5 71.85 34 7.26 Yes 47 0.43 No 0 0 No -30 0.67 Yes 47 87.74 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32899863 + NM_000059 BRCA2 0 . . . 3.25 80.12 20 7.87 Yes 8 1.2 Yes 0 0 No -19 0.61 No 50 88.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68849516 + NM_133509 RAD51B 0 . . . 1.38 67.37 26 6.32 Yes 69 -2.99 No 0 0 No -26 0.29 No 36 58.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68850433 + NM_133509 RAD51B 0 . . . 3.34 0 35 6.24 Yes 41 0.42 No 0 0 No -29 0.52 No 39 69.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7583402 - NM_000546 TP53 0 . . . 5.71 80.65 24 4.73 No 5 0.85 Yes 0 0 No -45 0.93 Yes 43 67.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69123176 + NM_133509 RAD51B 0 . . . 1.01 75.85 26 5.66 Yes -4 0.84 Yes 0 0 No -25 0.64 No 13 53.69 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59784773 - NM_032043 BRIP1 0 . . . 3.23 85.8 14 4.97 No 8 1.06 Yes 0 0 No -44 0.88 Yes 50 77.4 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90982289 - NM_002485 NBN 0 . . . 4.73 84.51 21 4.8 No 28 1 Yes 0 0 No -26 0.55 No 30 43.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68358267 + NM_133509 RAD51B 0 . . . 3.26 78.13 29 5.65 Yes 20 0.27 No 0 0 No -24 0.87 Yes 38 47.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47694765 + NM_000251 MSH2 0 . . . 4.67 85.02 29 4.56 No 60 1.41 Yes 0 0 No -29 0.78 Yes 54 50.01 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190688756 + NM_000534 PMS1 0 . . . 0.24 0 24 5.1 No 13 0.04 No 0 0 No -23 0.89 Yes 39 18.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68413763 + NM_133509 RAD51B 0 . . . 3.39 73.03 19 4.36 No 34 0.93 Yes 0 0 No -18 0.92 Yes 48 60.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68790609 + NM_004360 CDH1 0 . . . 5.48 77.83 27 6.41 Yes 10 1.49 Yes 0 0 No -26 0.74 Yes 47 78.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23639183 - NM_024675 PALB2 0 . . . 3.98 83.07 19 7.06 Yes 60 1.13 Yes 0 0 No -23 0.7 Yes 52 34.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190717637 + NM_000534 PMS1 0 . . . 2.84 68.26 23 4.9 No 9 -2.34 No 0 0 No -36 0.41 No 45 45.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33429243 - NM_002878 RAD51D 0 . . . 1.78 76.63 17 5.76 Yes 40 -3.04 No 0 0 No -17 0.51 No 50 61.92 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68438811 + NM_133509 RAD51B 0 . . . 2.83 76.24 17 6.36 Yes 2 2.17 Yes 0 0 No -37 0.78 Yes 39 44.19 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr1 45792924 - NM_001048171 MUTYH 0 . . . 2.47 66.53 53 5.6 Yes 52 -1.43 No 0 0 No -28 0.76 Yes 50 53.3 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108174903 + NM_000051 ATM 0 . . . 3.17 81.11 35 6.08 Yes 7 0.47 No 0 0 No -34 0.84 Yes 41 43.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68369756 + NM_133509 RAD51B 0 . . . 6.85 91.79 23 5.2 No 4 1.03 Yes 0 0 No -22 0.79 Yes 47 89.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68618662 + NM_133509 RAD51B 0 . . . 2.53 68.36 16 7.7 Yes 16 1.16 Yes 0 0 No -26 0.53 No 42 93.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89651810 + NM_000314 PTEN 0 . . . 1.52 0 26 5.73 Yes 2 0.08 No 0 0 No -25 0.86 Yes 49 26.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68823467 + NM_004360 CDH1 0 . . . 0.44 65.6 15 4.58 No 37 1.3 Yes 0 0 No -17 0.43 No 21 92.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108123045 + NM_000051 ATM 0 . . . 1.46 70.01 39 10.19 Yes 2 1.05 Yes 0 0 No -38 0.91 Yes 41 82.9 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41014946 + NM_001164269 RAD51 0 . . . 6.49 85.46 18 5.29 No 3 1.19 Yes 0 0 No -17 0.31 No 43 53.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69071824 + NM_133509 RAD51B 0 . . . 0.04 0 28 5.1 No 18 0.97 Yes 0 0 No -26 0.52 No 40 89.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41239652 - NM_007294 BRCA1 0 . . . 5.41 90.92 20 4 No 48 1.06 Yes 0 0 No -33 0.7 Yes 10 49.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68770096 + NM_133509 RAD51B 0 . . . 0.54 68.83 19 4.97 No -2 0.42 No 0 0 No -18 0.61 No 43 48.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47684370 + NM_000251 MSH2 0 . . . 3.5 69.94 28 5.38 No 16 1.69 Yes 0 0 No -23 0.45 No 51 62.6 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 104182239 - NM_001100119 XRCC3 0 . . . 4.16 72.14 19 4.8 No NA NA NA 0 0 No -18 0.85 Yes 50 21.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68733130 + NM_133509 RAD51B 0 . . . 1.02 60.71 49 7.14 Yes 70 -3.1 No 0 0 No -23 0.72 Yes 42 59.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68548516 + NM_133509 RAD51B 0 . . . 1.6 69.81 18 7.57 Yes 0 1.24 Yes 0 0 No -22 0.51 No 42 46.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69076490 + NM_133509 RAD51B 0 . . . 9.52 87.98 24 5.9 Yes 18 1.55 Yes 0 0 No -23 0.8 Yes 40 96.77 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68557209 + NM_133509 RAD51B 0 . . . 3.05 77.03 42 6.92 Yes 73 0.84 Yes 0 0 No -41 0.47 No 53 76.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68763340 + NM_133509 RAD51B 0 . . . 2.4 76.86 33 5.16 No 54 0.28 No 0 0 No -28 0.18 No 52 48.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190731599 + NM_000534 PMS1 0 . . . 2.66 79.24 22 5 No 60 -4.35 No 0 0 No -57 0.66 No 37 71.42 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23641949 - NM_024675 PALB2 0 . . . 9.23 88.55 9 3.87 No 40 1.31 Yes 0 0 No -24 0.85 Yes 37 60.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69046934 + NM_133509 RAD51B 0 . . . 4.8 68.83 24 6.78 Yes 31 1.06 Yes 0 0 No -23 0.63 No 39 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131925760 + NM_005732 RAD50 0 . . . 1.1 72.79 29 4.48 No 62 1.97 Yes 0 0 No -55 0.83 Yes 45 38.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90988609 - NM_002485 NBN 0 . . . 4.01 80.93 21 5.06 No 48 0.9 Yes 0 0 No -26 0.47 No 49 43.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6048242 - NM_000535 PMS2 0 . . . 7.68 85.02 36 6.08 Yes 41 1.77 Yes 0 0 No -35 0.73 Yes 22 70.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59766451 - NM_032043 BRIP1 0 . . . 0.68 76.63 13 4.36 No 66 -5.45 No 0 0 No -58 0.91 Yes 43 30.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68471977 + NM_133509 RAD51B 0 . . . 2.58 71.75 19 5 No 29 1.03 Yes 0 0 No -18 0.75 Yes 44 69.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1227185 + NM_000455 STK11 0 . . . 8.45 81.62 29 5.48 No 41 0.74 No 0 0 No -28 0.91 Yes 28 62.49 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41002671 + NM_001164269 RAD51 0 . . . 2.96 81.37 11 4.8 No 71 -5.28 No 0 0 No -16 0.43 No 48 82.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40993668 + NM_001164269 RAD51 0 . . . 3.54 71.67 19 6 Yes 10 0.99 Yes 0 0 No -29 0.69 Yes 48 89.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68864923 + NM_004360 CDH1 0 . . . 2.19 72.91 21 5.19 No -3 0.71 No 0 0 No -20 0.54 No 34 53.58 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131976946 + NM_005732 RAD50 0 . . . 0.52 69.73 25 4.85 No 9 0.74 No 0 0 No -22 0.77 Yes 49 42.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68860366 + NM_004360 CDH1 0 . . . 7.25 86.71 27 5.74 Yes 22 0.85 Yes 0 0 No -26 0.7 Yes 36 69.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68859180 + NM_133509 RAD51B 0 . . . 8.23 76.85 28 7 Yes 41 2 Yes 0 0 No -26 0.58 No 25 68.09 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69128122 + NM_133509 RAD51B 0 . . . 1.47 72.35 21 6.74 Yes 70 -0.41 No 0 0 No -20 0.59 No 29 56.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68355190 + NM_133509 RAD51B 0 . . . 4.03 80.96 29 6.32 Yes 48 -2.63 No 0 0 No -28 0.81 Yes 55 29.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32904144 + NM_000059 BRCA2 0 . . . 0.36 71.92 18 4.69 No 24 0.35 No 0 0 No -46 0.7 Yes 34 87.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68968662 + NM_133509 RAD51B 0 . . . 7.61 87.49 62 7.83 Yes 34 -1.55 No 0 0 No -22 0.53 No 48 65.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69099860 + NM_133509 RAD51B 0 . . . 2.35 78.88 26 5.2 No 74 0.84 Yes 0 0 No -20 0.69 Yes 49 66.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59823417 - NM_032043 BRIP1 0 . . . 4.95 90.3 15 5.1 No 26 0.39 No 0 0 No -45 0.43 No 51 82.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21990675 - NM_000077 CDKN2A 0 . . . 0.32 0 32 5.74 Yes 44 0.2 No 0 0 No -31 0.94 Yes 50 62.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90978148 - NM_002485 NBN 0 . . . 1.01 0 30 4.94 No 66 -5.33 No 0 0 No -49 0.32 No 52 56.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41009689 + NM_001164269 RAD51 0 . . . 4.52 76.74 18 5.28 No 20 0.07 No 0 0 No -24 0.63 No 48 72.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37059434 + NM_000249 MLH1 0 . . . 3.8 70.05 38 7.4 Yes 11 0.68 No 0 0 No -37 0.92 Yes 47 67.73 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68980823 + NM_133509 RAD51B 0 . . . 2.23 65.64 28 7.41 Yes 18 0.52 No 0 0 No -27 0.64 No 32 84.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68326720 + NM_133509 RAD51B 0 . . . 5.2 85.02 28 5.33 No 5 1.23 Yes 0 0 No -27 0.52 No 53 80.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40995034 + NM_001164269 RAD51 0 . . . 8.23 85.05 14 4.15 No 73 0.56 No 0 0 No -23 0.59 No 47 84.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131951805 + NM_005732 RAD50 0 . . . 1.56 74.38 30 5.39 No 74 0.97 Yes 0 0 No -19 0.53 No 60 15.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23612969 - NM_024675 PALB2 0 . . . 0.59 79.89 16 5.07 No 34 1.02 Yes 0 0 No -20 0.62 No 50 68.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21992670 - NM_000077 CDKN2A 0 . . . 2.43 63.03 15 5.74 Yes 48 0.31 No 0 0 No -26 0.85 Yes 48 52.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90952247 - NM_002485 NBN 0 . . . 1.13 71.78 16 4.69 No 24 1.53 Yes 0 0 No -50 0.68 Yes 41 86.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68505360 + NM_133509 RAD51B 0 . . . 1.23 79.43 24 4.68 No 33 -2.75 No 0 0 No -23 0.65 No 48 86.24 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59770978 - NM_032043 BRIP1 0 . . . 2.43 73.96 15 3.73 No 18 1.28 Yes 0 0 No -24 0.77 Yes 49 58.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68454164 + NM_133509 RAD51B 0 . . . 1.88 81.17 10 4.45 No 72 1.86 Yes 0 0 No -29 0.43 No 46 57.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68762263 + NM_133509 RAD51B 0 . . . 2.78 81.13 34 5.05 No 67 1.83 Yes 0 0 No -28 0.93 Yes 53 45.78 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104167011 - NM_001100119 XRCC3 0 . . . 1.82 72.79 24 5.92 Yes 44 0.23 No 0 0 No -23 0.49 No 49 27.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75509410 - NM_001040108 MLH3 0 . . . 6.08 75.26 28 5.83 Yes -1 0.79 Yes 0 0 No -27 0.86 Yes 53 66.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131911435 + NM_005732 RAD50 0 . . . 1.03 68.1 23 6.29 Yes 27 0.89 Yes 31 0.77 Yes -22 0.83 Yes 44 47.11 No BPP: Yes, SVM: Yes, Branch: , LB: Yes, RNABPS: No chr11 108232575 + NM_000051 ATM 0 . . . 0.25 57.92 14 4.24 No 61 -4.02 No 0 0 No -21 0.78 Yes 52 61.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131891252 + NM_005732 RAD50 0 . . . 3.46 84.95 21 5.2 No 25 0.43 No 0 0 No -20 0.77 Yes 44 57.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89724760 + NM_000314 PTEN 0 . . . 2.54 76.63 53 7.25 Yes 58 -3.88 No 0 0 No -36 0.62 No 53 39.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32953732 + NM_000059 BRCA2 0 . . . 1.03 73.03 19 4.97 No 57 0.48 No 0 0 No -21 0.53 No 49 80.06 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215673469 - NM_000465 BARD1 0 . . . 0 0 27 5.05 No 39 1.24 Yes 0 0 No -25 0.32 No 19 79.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108239355 + NM_000051 ATM 0 . . . 0.04 0 34 7.6 Yes 65 -5.7 No 0 0 No -33 0.75 Yes 39 28.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68715249 + NM_133509 RAD51B 0 . . . 5.97 75.83 17 3.99 No 14 0.7 No 0 0 No -20 0.62 No 41 79.73 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68999622 + NM_133509 RAD51B 0 . . . 2.37 61.88 44 7.07 Yes 71 -2.99 No 0 0 No -29 0.49 No 42 82.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47800618 + NM_000251 MSH2 0 . . . 1.56 74.32 25 4.96 No 36 0.5 No 0 0 No -24 0.86 Yes 49 69.83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215654598 - NM_000465 BARD1 0 . . . 0.51 66.94 37 4.64 No 52 0.97 Yes 0 0 No -25 0.58 No 49 67.08 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68544863 + NM_133509 RAD51B 0 . . . 7.84 83.82 25 4.2 No 14 0.04 No 0 0 No -25 0.59 No 46 56.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68566326 + NM_133509 RAD51B 0 . . . 4.02 76.82 15 5.66 Yes 7 0.55 No 0 0 No -55 0.38 No 46 73.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69044513 + NM_133509 RAD51B 0 . . . 5.04 77.52 10 2.79 No 53 0.54 No 0 0 No -26 0.63 No 40 57.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41010836 + NM_001164269 RAD51 0 . . . 6.26 76.3 16 6.86 Yes 55 -2.42 No 0 0 No -28 0.44 No 50 60.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68653212 + NM_133509 RAD51B 0 . . . 3.08 71.53 32 5.7 Yes 6 0.2 No 0 0 No -27 0.73 Yes 41 92.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47740486 + NM_000251 MSH2 0 . . . 5.44 79.97 18 4.8 No 47 1.5 Yes 0 0 No -18 0.5 No 48 64.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89659045 + NM_000314 PTEN 0 . . . 10.35 87.2 50 7.48 Yes 17 1.49 Yes 0 0 No -47 0.41 No 49 80.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68598942 + NM_133509 RAD51B 0 . . . 4.56 72.53 48 7.19 Yes 37 0.85 Yes 0 0 No -23 0.48 No 53 55.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69014933 + NM_133509 RAD51B 0 . . . 9.83 72.84 33 4.48 No 19 2.06 Yes 0 0 No -32 0.4 No 39 73.75 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56768171 + NM_058216 RAD51C 0 . . . 1.63 61.75 33 6.05 Yes 36 0.35 No 0 0 No -32 0.64 No 22 38.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59819746 - NM_032043 BRIP1 0 . . . 1.7 68.62 21 5.65 Yes 72 -5.59 No 0 0 No -20 0.5 No 42 35.4 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131935668 + NM_005732 RAD50 0 . . . 0.7 75.42 17 3.82 No 76 0.85 Yes 0 0 No -25 0.38 No 11 50.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68514498 + NM_133509 RAD51B 0 . . . 0.84 73.84 39 6.16 Yes 37 0.58 No 0 0 No -26 0.68 Yes 46 40.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68862072 + NM_133509 RAD51B 0 . . . 3.32 75.97 18 5.12 No 38 0.35 No 0 0 No -21 0.81 Yes 45 49.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41256831 - NM_007294 BRCA1 0 . . . 2.71 68.97 18 4.33 No 63 -4.76 No 0 0 No -17 0.87 Yes 41 54.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59932913 - NM_032043 BRIP1 0 . . . 3.3 84.79 18 5.74 Yes 76 1.48 Yes 0 0 No -26 0.84 Yes 15 71.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29114843 - NM_001005735 CHEK2 0 . . . 4.9 84.95 21 5.1 No 16 -0.97 No 0 0 No -24 0.42 No 48 74.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68836515 + NM_133509 RAD51B 0 . . . 5.86 80.02 17 5.06 No -3 0.46 No 0 0 No -16 0.67 Yes 48 60.73 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68790447 + NM_004360 CDH1 0 . . . 2.99 75.52 38 6.32 Yes 73 -1.69 No 0 0 No -22 0.78 Yes 46 80.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69005298 + NM_133509 RAD51B 0 . . . 1 66.88 29 7.07 Yes 65 0.39 No 0 0 No -28 0.95 Yes 24 69.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68496071 + NM_133509 RAD51B 0 . . . 4.94 78.68 33 6.11 Yes 11 1.18 Yes 0 0 No -32 0.7 Yes 47 72.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 104183288 - NM_001100119 XRCC3 0 . . . 0.08 58.47 13 5.29 No 0 0.46 No 0 0 No -21 0.51 No 58 47.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47714678 + NM_000251 MSH2 0 . . . 2.47 67.34 24 5.38 No 1 0.52 No 0 0 No -23 0.72 Yes 44 90.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68871093 + NM_133509 RAD51B 0 . . . 3.61 0 17 4.59 No 9 1.31 Yes 0 0 No -16 0.61 No 49 88.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190723368 + NM_000534 PMS1 0 . . . 5.37 82.6 21 4.69 No 5 0.52 No 0 0 No -20 0.93 Yes 48 43.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7585391 - NM_000546 TP53 0 . . . 0.68 70.67 15 4.58 No 69 -4.42 No 0 0 No -26 0.41 No 45 36.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68954949 + NM_133509 RAD51B 0 . . . 7.04 83.93 13 4.36 No 46 0.71 No 0 0 No -36 0.64 No 27 95.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89693551 + NM_000314 PTEN 0 . . . 7.89 79.62 28 5.66 Yes 63 1.22 Yes 0 0 No -25 0.63 No 41 77.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94200460 - NM_005591 MRE11 0 . . . 7.91 78.85 40 6.3 Yes 37 1.52 Yes 0 0 No -33 0.64 No 34 87.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190699236 + NM_000534 PMS1 0 . . . 2.78 72.12 37 5.44 No 52 0.6 No 0 0 No -27 0.73 Yes 47 69.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190655993 + NM_000534 PMS1 0 . . . 4.14 78.9 17 5.57 Yes 5 1.24 Yes 0 0 No -24 0.81 Yes 41 59.02 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41241767 - NM_007294 BRCA1 0 . . . 1.02 80.49 23 5.78 Yes 24 0.75 No 0 0 No -22 0.91 Yes 44 85.39 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68372123 + NM_133509 RAD51B 0 . . . 7.79 95.22 39 6.7 Yes 21 0.45 No 0 0 No -28 0.91 Yes 49 93.57 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68840237 + NM_004360 CDH1 0 . . . 1.96 80.12 41 6.15 Yes 61 1.69 Yes 0 0 No -35 0.34 No 51 88.92 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59938203 - NM_032043 BRIP1 0 . . . 2.67 78.04 33 4.28 No 39 0.7 No 0 0 No -26 0.28 No 24 77.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59845548 - NM_032043 BRIP1 0 . . . 3.65 74.12 17 4.78 No 30 1.22 Yes 0 0 No -19 0.37 No 38 78.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59789395 - NM_032043 BRIP1 0 . . . 2.54 71.95 24 5.83 Yes 69 -0.99 No 0 0 No -23 0.74 Yes 51 77.11 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131976752 + NM_005732 RAD50 0 . . . 3.59 0 30 5.34 No 76 -4.43 No 0 0 No -29 0.58 No 48 87.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37037495 + NM_000249 MLH1 0 . . . 4.73 85.02 14 5.37 No 3 1.18 Yes 0 0 No -25 0.3 No 41 77.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68803952 + NM_004360 CDH1 0 . . . 9.36 87.88 28 6.4 Yes 74 0.37 No 0 0 No -27 0.93 Yes 38 79.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 33436818 - NM_002878 RAD51D 0 . . . 0.96 67.3 53 8.91 Yes 64 1.1 Yes 0 0 No -24 0.63 No 36 43.14 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7563907 - NM_000546 TP53 0 . . . 1.51 0 23 3.78 No 61 1.23 Yes 0 0 No -22 0.57 No 40 64.31 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21991110 - NM_000077 CDKN2A 0 . . . 5.77 88.78 27 5.2 No -2 -1.79 No 0 0 No -21 0.56 No 37 63.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32957493 + NM_000059 BRCA2 0 . . . 0.87 63.57 16 5.07 No 65 -3.14 No 0 0 No -20 0.73 Yes 23 40.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215672061 - NM_000465 BARD1 0 . . . 1.15 73.85 17 4.85 No 32 0.65 No 0 0 No -26 0.7 Yes 26 61.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37072235 + NM_000249 MLH1 0 . . . 8.03 86.79 22 4.75 No 31 -1.04 No 0 0 No -21 0.84 Yes 45 85.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59761596 - NM_032043 BRIP1 0 . . . 4.26 82.71 24 5.39 No 55 0.47 No 0 0 No -31 0.54 No 51 65.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59837315 - NM_032043 BRIP1 0 . . . 3.01 85.99 26 5.62 Yes 44 -1.65 No 0 0 No -26 0.73 Yes 36 44.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59772454 - NM_032043 BRIP1 0 . . . 5.65 73.42 26 5.54 No 0 0.38 No 0 0 No -25 0.87 Yes 48 45.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68358222 + NM_133509 RAD51B 0 . . . 1.02 0 20 4.79 No 65 0.44 No 0 0 No -29 0.6 No 42 62.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190703819 + NM_000534 PMS1 0 . . . 1.59 68.36 41 6.58 Yes 16 0.97 Yes 0 0 No -40 0.82 Yes 42 90.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68534333 + NM_133509 RAD51B 0 . . . 4.69 83.99 31 10.25 Yes 3 0.71 No 0 0 No -30 0.97 Yes 41 62.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90994924 - NM_002485 NBN 0 . . . 5.15 82.52 23 4.35 No 34 1.91 Yes 0 0 No -26 0.29 No 39 52.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32971415 + NM_000059 BRCA2 0 . . . 1.26 57.37 17 5.29 No 60 -3.33 No 0 0 No -24 0.87 Yes 37 54.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56810748 + NM_058216 RAD51C 0 . . . 1.3 0 16 5.15 No 11 0.8 Yes 0 0 No -19 0.68 Yes 41 49.7 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59827307 - NM_032043 BRIP1 0 . . . 4.68 78.36 26 5.48 No 1 0.57 No 0 0 No -25 0.3 No 48 92.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68438852 + NM_133509 RAD51B 0 . . . 0.18 64.67 28 6.66 Yes 43 2.14 Yes 0 0 No -27 0.88 Yes 43 42.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131966051 + NM_005732 RAD50 0 . . . 2.86 78.73 27 6.4 Yes 75 0.97 Yes 0 0 No -26 0.81 Yes 51 33.73 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89631619 + NM_000314 PTEN 0 . . . 3.62 59.5 57 8.24 Yes 12 1.12 Yes 0 0 No -35 0.53 No 24 53.21 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105198713 + NM_021930 RINT1 0 . . . 1.44 80.22 28 4.41 No 67 -4.97 No 0 0 No -26 0.57 No 48 82.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69074172 + NM_133509 RAD51B 0 . . . 4.5 85.41 34 6 Yes 30 -0.53 No 0 0 No -33 0.9 Yes 52 65.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152348993 - NM_005431 XRCC2 0 . . . 2.48 75.52 23 5.01 No 25 0.82 Yes 0 0 No -22 0.5 No 46 48.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69134337 + NM_133509 RAD51B 0 . . . 3.24 88.82 35 6.71 Yes 15 -2.52 No 0 0 No -29 0.88 Yes 47 63.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105180383 + NM_021930 RINT1 0 . . . 5.62 73.6 22 5.29 No 33 0.51 No 0 0 No -21 0.58 No 43 54.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59874715 - NM_032043 BRIP1 0 . . . 1.66 80.8 26 3.87 No 19 0.88 Yes 0 0 No -23 0.88 Yes 51 70.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23616368 - NM_024675 PALB2 0 . . . 4.92 90.11 22 5.29 No 26 1.06 Yes 0 0 No -21 0.36 No 44 66.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21965887 - NM_000077 CDKN2A 0 . . . 10.96 81.9 24 5.48 No 27 1.15 Yes 0 0 No -20 0.45 No 31 65.84 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59921422 - NM_032043 BRIP1 0 . . . 4.36 73.02 25 5.03 No 55 0.36 No 0 0 No -25 0.31 No 42 69.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68875781 + NM_133509 RAD51B 0 . . . 6.61 84.57 22 4.7 No 18 0.47 No 0 0 No -21 0.66 No 40 57.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56791556 + NM_058216 RAD51C 0 . . . 0.42 74.73 31 5.57 Yes 33 1.16 Yes 0 0 No -30 0.55 No 16 47.43 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68378635 + NM_133509 RAD51B 0 . . . 6.23 78.82 65 7.88 Yes 4 0.4 No 0 0 No -33 0.31 No 51 88.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr9 21969460 - NM_000077 CDKN2A 0 . . . 0.83 70.52 21 5.03 No 51 0.59 No 0 0 No -20 0.59 No 44 42.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56797748 + NM_058216 RAD51C 0 . . . 2.39 76.63 30 6.47 Yes 58 -3.88 No 0 0 No -23 0.64 No 58 35.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68661429 + NM_133509 RAD51B 0 . . . 0.17 72.94 9 3.87 No 45 1.08 Yes 0 0 No -33 0.78 Yes 44 52.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68828577 + NM_133509 RAD51B 0 . . . 2.24 80.12 49 5.98 Yes 7 1.02 Yes 0 0 No -39 0.64 No 46 81.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68775784 + NM_004360 CDH1 0 . . . 1.48 76.76 17 6.4 Yes 19 -3.36 No 0 0 No -53 0.61 No 56 41.69 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68513207 + NM_133509 RAD51B 0 . . . 0.46 72.59 34 6.21 Yes 4 0.1 No 0 0 No -33 0.55 No 54 79.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104179811 - NM_001100119 XRCC3 0 . . . 3.15 75.84 26 5.38 No 44 0.95 Yes 0 0 No -25 0.82 Yes 48 62.18 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68608754 + NM_133509 RAD51B 0 . . . 7.23 88.54 62 6.62 Yes 4 0.52 No 0 0 No -31 0.76 Yes 46 66.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56786476 + NM_058216 RAD51C 0 . . . 2.3 84.41 17 4.6 No 13 0.91 Yes 0 0 No -25 0.45 No 45 78.32 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1214702 + NM_000455 STK11 0 . . . 0.86 0 42 6.88 Yes 9 1.52 Yes 0 0 No -35 0.69 Yes 49 57.11 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69083225 + NM_133509 RAD51B 0 . . . 1.54 0 23 4.79 No 26 0.14 No 0 0 No -22 0.73 Yes 39 36.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108216705 + NM_000051 ATM 0 . . . 7.97 86.9 18 5.47 No 55 1.18 Yes 0 0 No -27 0.7 Yes 46 67.19 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41266758 - NM_007294 BRCA1 0 . . . 1.08 75.62 36 6.33 Yes 58 1.18 Yes 0 0 No -57 0.38 No 42 53.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48017056 + NM_000179 MSH6 0 . . . 5.96 91.76 14 4.09 No 9 1.17 Yes 0 0 No -24 0.55 No 49 88.12 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68851330 + NM_004360 CDH1 0 . . . 0.89 0 21 5.04 No 17 0.78 Yes 0 0 No -20 0.55 No 52 69.04 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89636623 + NM_000314 PTEN 0 . . . 1.94 63.83 18 4.89 No 42 1.25 Yes 0 0 No -17 0.55 No 52 89.11 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59846060 - NM_032043 BRIP1 0 . . . 0.25 0 24 4.11 No 76 1.18 Yes 0 0 No -26 0.46 No 53 57.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68565752 + NM_133509 RAD51B 0 . . . 4.8 78.49 28 5.38 No -3 0.21 No 0 0 No -27 0.51 No 46 58.9 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41204751 - NM_007294 BRCA1 0 . . . 2.21 77.78 16 5.39 No 3 1.4 Yes 0 0 No -22 0.56 No 55 48.3 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68567671 + NM_133509 RAD51B 0 . . . 3.57 77.46 17 4.8 No 76 1.25 Yes 0 0 No -25 0.58 No 58 33.67 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59824429 - NM_032043 BRIP1 0 . . . 1.28 68.19 34 5.07 No 12 1.37 Yes 0 0 No -26 0.65 No 19 62.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37083777 + NM_000249 MLH1 0 . . . 2.5 78.47 32 6.28 Yes 31 0.44 No 0 0 No -30 0.26 No 26 82.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32899930 + NM_000059 BRCA2 0 . . . 0.55 77.34 11 3.4 No 11 1.63 Yes 0 0 No -32 0.44 No 47 82.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47690678 + NM_000251 MSH2 0 . . . 1.78 58.42 23 4.61 No 29 0.66 No 0 0 No -22 0.66 No 29 95.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105175018 + NM_021930 RINT1 0 . . . 3.49 66.45 19 5.3 No 69 -6.42 No 0 0 No -24 0.88 Yes 43 72.75 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68494553 + NM_133509 RAD51B 0 . . . 7.91 85.25 13 5.44 No 10 1.01 Yes 0 0 No -26 0.69 Yes 48 74.19 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68738199 + NM_133509 RAD51B 0 . . . 1.97 62.02 15 4.9 No 25 1.05 Yes 0 0 No -26 0.88 Yes 39 73.68 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69121590 + NM_133509 RAD51B 0 . . . 7.37 83.87 15 3.17 No -1 1.24 Yes 0 0 No -19 0.66 No 49 67.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41198748 - NM_007294 BRCA1 0 . . . 1.07 70.44 17 4.96 No 2 1.5 Yes 0 0 No -25 0.45 No 21 71.85 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108165438 + NM_000051 ATM 0 . . . 0.19 69.25 14 5.87 Yes 67 -5.7 No 0 0 No -25 0.3 No 50 74.2 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59835535 - NM_032043 BRIP1 0 . . . 2.39 72.36 27 5.29 No 19 0.73 No 0 0 No -26 0.46 No 43 59.76 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47656188 + NM_000251 MSH2 0 . . . 3.75 84.95 41 8.1 Yes 72 1.09 Yes 0 0 No -29 0.51 No 11 65.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68681519 + NM_133509 RAD51B 0 . . . 9.89 90.8 16 5.57 Yes 29 -0.87 No 0 0 No -24 0.43 No 50 73.34 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59777084 - NM_032043 BRIP1 0 . . . 2.02 0 37 7.4 Yes 47 0.58 No 0 0 No -29 0.75 Yes 55 40.31 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37091646 + NM_000249 MLH1 0 . . . 1.59 70.25 21 6.71 Yes 13 -2.83 No 0 0 No -20 0.86 Yes 23 35.84 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68812667 + NM_004360 CDH1 0 . . . 4.48 78.72 11 4.12 No 17 1.32 Yes 0 0 No -36 0.81 Yes 41 85.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190683355 + NM_000534 PMS1 0 . . . 3.72 63.94 15 5.29 No 66 -1.95 No 0 0 No -25 0.66 No 45 58.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68433195 + NM_133509 RAD51B 0 . . . 0.97 70.46 47 5.84 Yes 64 1.28 Yes 0 0 No -46 0.76 Yes 44 71.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59893365 - NM_032043 BRIP1 0 . . . 0.27 67.37 23 5.66 Yes -4 -2.11 No 0 0 No -22 0.78 Yes 44 82.51 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 7573793 - NM_000546 TP53 0 . . . 0.73 0 18 4.9 No 20 2.01 Yes 0 0 No -59 0.28 No 38 82.05 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68866151 + NM_133509 RAD51B 0 . . . 1.62 77.56 40 7.6 Yes 67 1.16 Yes 0 0 No -39 0.93 Yes 46 62.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131949397 + NM_005732 RAD50 0 . . . 1.92 65.88 28 5.65 Yes 16 1.05 Yes 0 0 No -27 0.64 No 42 82.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59830243 - NM_032043 BRIP1 0 . . . 3.72 84.12 9 3.87 No 3 0.05 No 0 0 No -18 0.69 Yes 39 72.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68484094 + NM_133509 RAD51B 0 . . . 4.33 85.22 37 5.1 No 53 0.95 Yes 0 0 No -26 0.35 No 43 46.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr3 37053169 + NM_000249 MLH1 0 . . . 2.16 66.2 13 4.38 No 55 0.65 No 0 0 No -21 0.51 No 43 60.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68757297 + NM_133509 RAD51B 0 . . . 5.29 79.95 43 6.54 Yes 9 0.33 No 0 0 No -27 0.9 Yes 39 56.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108165534 + NM_000051 ATM 0 . . . 1.54 73.63 17 4.59 No 44 -2.49 No 0 0 No -27 0.3 No 46 75.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108115903 + NM_000051 ATM 0 . . . 3.39 78.08 25 4.12 No 48 0.69 No 0 0 No -24 0.81 Yes 47 93.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68322162 + NM_133509 RAD51B 0 . . . 1.93 72.74 14 3.9 No 37 1.4 Yes 0 0 No -24 0.14 No 21 94.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7585067 - NM_000546 TP53 0 . . . 2.19 74.47 13 3.87 No 4 0.44 No 0 0 No -48 0.7 Yes 39 40.12 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105175406 + NM_021930 RINT1 0 . . . 2.62 68.34 12 4.2 No 5 -1.68 No 0 0 No -31 0.42 No 43 61.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131917902 + NM_005732 RAD50 0 . . . 1.62 65.27 21 5.1 No 64 -5.25 No 0 0 No -19 0.4 No 62 23.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32902456 + NM_000059 BRCA2 0 . . . 4.01 79.01 57 7.75 Yes 47 -0.24 No 0 0 No -27 0.45 No 47 86.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215615328 - NM_000465 BARD1 0 . . . 1.59 68.36 36 6.73 Yes 10 0.11 No 0 0 No -36 0.23 No 48 59.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190699366 + NM_000534 PMS1 0 . . . 5.79 83.5 64 9.94 Yes 7 0.87 Yes 0 0 No -21 0.31 No 40 47.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68629623 + NM_133509 RAD51B 0 . . . 1.18 78.61 35 7 Yes 69 -2.99 No 0 0 No -28 0.48 No 46 69.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52434383 - NM_004656 BAP1 0 . . . 2.58 69.99 18 5.64 Yes 28 -3.39 No 0 0 No -21 0.59 No 50 86.48 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108112773 + NM_000051 ATM 0 . . . 7.2 77.89 23 5.81 Yes 32 0.75 No 0 0 No -22 0.44 No 39 97.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68389895 + NM_133509 RAD51B 0 . . . 3.18 0 27 5.29 No 9 1.39 Yes 0 0 No -27 0.32 No 49 71.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68844306 + NM_004360 CDH1 0 . . . 0.29 69.16 34 6.32 Yes 35 -1.95 No 0 0 No -33 0.52 No 38 43.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69142229 + NM_133509 RAD51B 0 . . . 1.35 72.21 20 1.44 No 50 1.39 Yes 0 0 No -24 0.23 No 47 77 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69067168 + NM_133509 RAD51B 0 . . . 7.34 79.73 59 6.54 Yes -3 0.44 No 0 0 No -55 0.59 No 49 44.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89696565 + NM_000314 PTEN 0 . . . 6.25 82.69 12 3.89 No 45 0.9 Yes 0 0 No -19 0.65 No 49 57.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215591445 - NM_000465 BARD1 0 . . . 7.45 82.98 62 7.87 Yes 76 0.53 No 0 0 No -33 0.73 Yes 49 47.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59809262 - NM_032043 BRIP1 0 . . . 5 66.76 15 5.52 No 21 0.38 No 0 0 No -28 0.36 No 41 49.11 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23636818 - NM_024675 PALB2 0 . . . 6.06 94.45 38 6.4 Yes 75 1.51 Yes 0 0 No -30 0.51 No 44 60.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215658429 - NM_000465 BARD1 0 . . . 2.26 62.7 24 5.29 No 56 0.88 Yes 0 0 No -21 0.74 Yes 41 64.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 152367570 - NM_005431 XRCC2 0 . . . 3.56 75.64 26 5.14 No 7 1.19 Yes 0 0 No -25 0.87 Yes 51 94.82 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68631110 + NM_133509 RAD51B 0 . . . 2.94 74.71 36 5.65 Yes 35 0.14 No 0 0 No -35 0.47 No 46 66.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68649024 + NM_133509 RAD51B 0 . . . 6.23 80.39 18 5.45 No 50 1.17 Yes 0 0 No -17 0.6 No 48 77.86 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104165113 - NM_001100119 XRCC3 0 . . . 0.97 67.43 23 5.37 No 11 0.32 No 0 0 No -22 0.6 No 47 78.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190689703 + NM_000534 PMS1 0 . . . 2.74 81.52 26 5.16 No 63 1.11 Yes 0 0 No -26 0.26 No 42 81.01 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40991095 + NM_001164269 RAD51 0 . . . 2.67 77.51 17 3.99 No 22 0.05 No 0 0 No -18 0.49 No 49 54.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89647099 + NM_000314 PTEN 0 . . . 0.51 78.34 26 6.93 Yes 63 0.21 No 0 0 No -23 0.76 Yes 44 46.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68617794 + NM_133509 RAD51B 0 . . . 7.59 95.32 23 4.89 No 50 0.98 Yes 0 0 No -22 0.64 No 47 92.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68505087 + NM_133509 RAD51B 0 . . . 0.3 63.33 29 5.23 No 13 0.79 Yes 0 0 No -24 0.82 Yes 45 85.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152353055 - NM_005431 XRCC2 0 . . . 7.38 86.26 19 3.7 No 34 1.16 Yes 0 0 No -18 0.7 Yes 36 74.79 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69046041 + NM_133509 RAD51B 0 . . . 0.51 0 15 5.65 Yes 64 0.53 No 0 0 No -14 0.37 No 57 48.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190667020 + NM_000534 PMS1 0 . . . 2.28 68.02 19 5.83 Yes 11 1.81 Yes 0 0 No -19 0.61 No 36 45.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41253908 - NM_007294 BRCA1 0 . . . 1.51 71.64 34 5.14 No 33 0.85 Yes 0 0 No -34 0.7 Yes 60 40.1 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41205820 - NM_007294 BRCA1 0 . . . 2.82 80.12 27 4.31 No 6 0.96 Yes 0 0 No -56 0.56 No 52 69.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47797542 + NM_000251 MSH2 0 . . . 1.18 66.16 12 4.8 No 48 -1.68 No 0 0 No -18 0.42 No 49 21.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32924280 + NM_000059 BRCA2 0 . . . 3.28 71.16 27 5.34 No 66 0.62 No 0 0 No -26 0.47 No 46 75.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68373645 + NM_133509 RAD51B 0 . . . 1.08 84.22 26 4.5 No 33 1.05 Yes 0 0 No -25 0.82 Yes 25 45.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68997773 + NM_133509 RAD51B 0 . . . 3.38 64.78 20 5.42 No 63 -4.92 No 0 0 No -27 0.66 No 43 58.92 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94180157 - NM_005591 MRE11 0 . . . 3.92 76.41 41 6.03 Yes 54 1.46 Yes 0 0 No -32 0.69 Yes 50 89.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68458566 + NM_133509 RAD51B 0 . . . 1.5 72.33 27 7.64 Yes 25 -2.14 No 0 0 No -26 0.82 Yes 48 35.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47797377 + NM_000251 MSH2 0 . . . 0.18 76.56 16 3.87 No 29 -0.99 No 0 0 No -54 0.67 Yes 48 42.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6030230 - NM_000535 PMS2 0 . . . 6.03 70.52 22 4.36 No -3 0 No 0 0 No -28 0.52 No 46 80.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108192976 + NM_000051 ATM 0 . . . 5.34 88.46 10 3.98 No 9 0.99 Yes 0 0 No -30 0.78 Yes 49 93.25 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215607703 - NM_000465 BARD1 0 . . . 1.85 60.2 22 5.29 No 39 1.2 Yes 0 0 No -21 0.87 Yes 28 84.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68487711 + NM_133509 RAD51B 0 . . . 4.16 77.04 22 4.79 No 43 -2.78 No 0 0 No -21 0.66 No 46 60.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68810455 + NM_004360 CDH1 0 . . . 1.77 0 32 5.6 Yes 44 0.45 No 0 0 No -27 0.68 Yes 36 88.49 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89645390 + NM_000314 PTEN 0 . . . 4.74 78.2 23 5.1 No 7 0.66 No 0 0 No -22 0.84 Yes 50 64.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56794349 + NM_058216 RAD51C 0 . . . 3.62 80.12 15 4.58 No 10 1.21 Yes 0 0 No -54 0.25 No 48 90.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68567679 + NM_133509 RAD51B 0 . . . 0.41 0 29 5.29 No 0 0.23 No 0 0 No -31 0.47 No 50 65.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68687065 + NM_133509 RAD51B 0 . . . 2.57 67.94 25 5.2 No 75 -6.06 No 0 0 No -24 0.73 Yes 39 56.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68419719 + NM_133509 RAD51B 0 . . . 5.1 69.79 26 4.96 No 66 0.76 No 0 0 No -47 0.68 Yes 51 37.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68775432 + NM_004360 CDH1 0 . . . 0.87 77.57 15 4.35 No 26 0.48 No 0 0 No -49 0.4 No 23 35.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68860881 + NM_004360 CDH1 0 . . . 4.31 76.4 18 3.6 No 29 0.19 No 0 0 No -20 0.53 No 50 85.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59826692 - NM_032043 BRIP1 0 . . . 11.37 86.46 29 5.57 Yes 36 1.63 Yes 0 0 No -28 0.59 No 47 78.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68641736 + NM_133509 RAD51B 0 . . . 7.98 85.32 21 3.42 No 35 0.61 No 0 0 No -21 0.63 No 43 37.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69036949 + NM_133509 RAD51B 0 . . . 4.19 71.25 28 3.77 No 30 1.61 Yes 0 0 No -27 0.81 Yes 28 87.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68433289 + NM_133509 RAD51B 0 . . . 3.09 70.28 28 5.38 No 42 1.95 Yes 0 0 No -27 0.54 No 16 71.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68661043 + NM_133509 RAD51B 0 . . . 4.42 88.4 20 5.83 Yes 27 0.63 No 0 0 No -31 0.48 No 46 33.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89669178 + NM_000314 PTEN 0 . . . 0.63 80.65 36 5.52 No 33 0.91 Yes 0 0 No -19 0.6 No 25 34.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47670897 + NM_000251 MSH2 0 . . . 1.04 63.34 40 6.4 Yes 65 -5.03 No 0 0 No -39 0.52 No 28 53.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47692000 + NM_000251 MSH2 0 . . . 5.87 75.71 20 4.97 No 41 0.48 No 0 0 No -20 0.73 Yes 37 85.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105193774 + NM_021930 RINT1 0 . . . 1.25 66.27 33 6.08 Yes 16 0.59 No 0 0 No -27 0.53 No 42 75.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104171735 - NM_001100119 XRCC3 0 . . . 5.2 78.61 25 5.04 No 63 -1.74 No 0 0 No -24 0.76 Yes 53 60.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190726992 + NM_000534 PMS1 0 . . . 2.51 71.94 40 4.68 No 23 2.61 Yes 0 0 No -25 0.38 No 35 92.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56807273 + NM_058216 RAD51C 0 . . . 3.82 70.6 21 4.47 No 3 0.4 No 0 0 No -28 0.89 Yes 43 75.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94159669 - NM_005591 MRE11 0 . . . 8.47 85.23 24 6.08 Yes 42 1.49 Yes 0 0 No -23 0.89 Yes 38 83.99 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68693106 + NM_133509 RAD51B 0 . . . 3.42 71.27 17 5.47 No 62 0.84 Yes 0 0 No -26 0.6 No 35 47.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90976948 - NM_002485 NBN 0 . . . 10.36 89.13 27 5.2 No 52 -2.7 No 0 0 No -59 0.75 Yes 46 86.37 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215656203 - NM_000465 BARD1 0 . . . 7.15 87.91 27 3.68 No 41 0.22 No 0 0 No -49 0.37 No 49 58.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41251599 - NM_007294 BRCA1 0 . . . 2.1 75.97 35 5.58 Yes 66 0.01 No 0 0 No -16 0.28 No 59 60.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69048985 + NM_133509 RAD51B 0 . . . 1.57 71.89 11 4.9 No 52 -2.67 No 0 0 No -28 0.82 Yes 42 33.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21986481 - NM_000077 CDKN2A 0 . . . 4.72 76.04 17 5.42 No 59 -4.81 No 0 0 No -25 0.74 Yes 48 59.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131964863 + NM_005732 RAD50 0 . . . 4.85 75.31 11 4.8 No 31 -0.76 No 0 0 No -29 0.22 No 49 44.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59774019 - NM_032043 BRIP1 0 . . . 3.85 84 28 6.47 Yes 2 1.51 Yes 0 0 No -27 0.77 Yes 14 41.38 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68818534 + NM_004360 CDH1 0 . . . 2.9 69.04 21 5.1 No 72 0.02 No 0 0 No -20 0.33 No 46 82.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32891747 + NM_000059 BRCA2 0 . . . 2.51 61.01 21 4.88 No 26 0.44 No 0 0 No -20 0.71 Yes 46 30.09 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68678022 + NM_133509 RAD51B 0 . . . 2.97 72.16 25 4.08 No 50 1.06 Yes 0 0 No -24 0.95 Yes 45 66.65 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21972940 - NM_000077 CDKN2A 0 . . . 5.11 80.38 24 5 No 57 0.71 No 0 0 No -22 0.85 Yes 46 64.95 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108237620 + NM_000051 ATM 0 . . . 7.56 77.63 28 5.38 No 39 0.5 No 0 0 No -27 0.66 No 41 67.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47751918 + NM_000251 MSH2 0 . . . 4.53 80.96 13 5.69 Yes 32 0.32 No 0 0 No -46 0.49 No 47 63.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68445141 + NM_133509 RAD51B 0 . . . 14.21 90.95 31 5.56 Yes 35 1.26 Yes 0 0 No -27 0.57 No 47 58.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68620999 + NM_133509 RAD51B 0 . . . 4.18 88.07 40 6.51 Yes 65 0.41 No 0 0 No -29 0.6 No 53 69.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59881063 - NM_032043 BRIP1 0 . . . 4.54 74.24 18 5.29 No 8 1.08 Yes 0 0 No -31 0.43 No 50 37.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47701104 + NM_000251 MSH2 0 . . . 2.65 59.19 28 4.9 No 61 0.81 Yes 0 0 No -27 0.44 No 22 43.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68667465 + NM_133509 RAD51B 0 . . . 5.82 88.33 17 5.29 No 9 1.03 Yes 0 0 No -16 0.4 No 49 95.79 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152348683 - NM_005431 XRCC2 0 . . . 9.35 85 20 5.1 No 20 0.28 No 0 0 No -19 0.34 No 48 64.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68778548 + NM_004360 CDH1 0 . . . 3.8 78.82 9 4.9 No 47 1.45 Yes 0 0 No -22 0.35 No 11 55.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75487471 - NM_001040108 MLH3 0 . . . 2.09 64.85 11 4.1 No 32 1.63 Yes 0 0 No -30 0.33 No 26 91.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94184094 - NM_005591 MRE11 0 . . . 10.88 80.32 43 6.46 Yes 24 1.33 Yes 0 0 No -38 0.39 No 34 88.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68497023 + NM_133509 RAD51B 0 . . . 1.02 75.9 35 6.07 Yes 41 1.96 Yes 0 0 No -32 0.76 Yes 45 68.12 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90951801 - NM_002485 NBN 0 . . . 3.49 73.24 15 5.39 No 61 -3.05 No 0 0 No -14 0.35 No 29 90.85 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1205158 + NM_000455 STK11 0 . . . 0.71 73.44 56 6.1 Yes 25 -0.74 No 0 0 No -24 0.64 No 30 59.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190692134 + NM_000534 PMS1 0 . . . 7.44 85.68 41 6.41 Yes 7 1.15 Yes 0 0 No -40 0.91 Yes 45 93.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6043920 - NM_000535 PMS2 0 . . . 3.09 75.17 32 7.41 Yes 36 0.39 No 0 0 No -31 0.54 No 22 86.36 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68815721 + NM_133509 RAD51B 0 . . . 0.48 0 20 4.98 No 9 0.64 No 0 0 No -19 0.37 No 39 49.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68412114 + NM_133509 RAD51B 0 . . . 6.84 92.67 31 5.92 Yes 0 0.48 No 0 0 No -31 0.68 Yes 42 72.32 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190668256 + NM_000534 PMS1 0 . . . 4.52 72.36 29 5.48 No 19 1.08 Yes 0 0 No -28 0.89 Yes 39 88.84 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59894079 - NM_032043 BRIP1 0 . . . 4.14 80.73 26 4.39 No 44 0.78 Yes 0 0 No -25 0.89 Yes 14 37.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56794086 + NM_058216 RAD51C 0 . . . 4.08 71.34 60 7.34 Yes 21 1.81 Yes 0 0 No -27 0.47 No 37 87.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32962143 + NM_000059 BRCA2 0 . . . 2.46 76.88 16 4.8 No 56 -1.58 No 0 0 No -19 0.31 No 46 74.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29109610 - NM_001005735 CHEK2 0 . . . 0.09 74.68 17 4.8 No 4 0.41 No 0 0 No -19 0.54 No 54 76.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68439904 + NM_133509 RAD51B 0 . . . 4.66 74.66 17 3.79 No -4 1.4 Yes 0 0 No -19 0.8 Yes 42 50.04 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89674860 + NM_000314 PTEN 0 . . . 0.42 74.73 18 4.83 No 34 1.19 Yes 0 0 No -17 0.39 No 24 69.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68541781 + NM_133509 RAD51B 0 . . . 0.15 69.5 55 6.89 Yes 26 0.49 No 0 0 No -21 0.32 No 32 48.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190680745 + NM_000534 PMS1 0 . . . 2.39 78.8 31 5.95 Yes 5 0.23 No 0 0 No -30 0.63 No 53 81.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69057573 + NM_133509 RAD51B 0 . . . 0.66 59.6 31 6.08 Yes 48 1.92 Yes 0 0 No -30 0.83 Yes 10 62.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32970546 + NM_000059 BRCA2 0 . . . 3.7 73.21 13 5 No 0 0.37 No 0 0 No -26 0.63 No 40 53.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648682 - NM_024675 PALB2 0 . . . 6.11 87.26 27 3.95 No 11 0.13 No 0 0 No -29 0.37 No 53 33.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7570817 - NM_000546 TP53 0 . . . 7.28 77.54 26 4.97 No 41 -1.76 No 0 0 No -25 0.82 Yes 43 44.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68860073 + NM_004360 CDH1 0 . . . 9.06 90.79 26 5.48 No 65 -4.05 No 0 0 No -25 0.88 Yes 42 84.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131969060 + NM_005732 RAD50 0 . . . 3.24 73.52 19 4.79 No 23 1.6 Yes 0 0 No -25 0.66 No 45 72.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69146391 + NM_133509 RAD51B 0 . . . 1.05 0 44 6.84 Yes 56 0.95 Yes 0 0 No -31 0.19 No 26 47.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68319960 + NM_133509 RAD51B 0 . . . 8.11 81.8 19 5 No 3 0.99 Yes 0 0 No -36 0.87 Yes 49 75.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47673391 + NM_000251 MSH2 0 . . . 2.64 67.66 19 4.33 No 19 -3.05 No 0 0 No -23 0.65 No 48 39.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105199739 + NM_021930 RINT1 0 . . . 2.09 74.47 20 6.2 Yes 51 -3.15 No 0 0 No -26 0.81 Yes 49 48.24 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68919006 + NM_133509 RAD51B 0 . . . 4.9 67.86 27 4.45 No 64 -2.18 No 0 0 No -26 0.31 No 40 75.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32899389 + NM_000059 BRCA2 0 . . . 4.71 82.02 26 5.9 Yes 76 0.87 Yes 0 0 No -25 0.58 No 41 41.08 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84394620 - NM_139076 FAM175A 0 . . . 0.86 58.93 17 4.69 No 20 0.61 No 0 0 No -23 0.54 No 19 90.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215596134 - NM_000465 BARD1 0 . . . 5.09 75.49 17 6.14 Yes 68 -3.98 No 0 0 No -23 0.3 No 42 50.78 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68649620 + NM_133509 RAD51B 0 . . . 4.1 71.27 13 4.38 No 10 0.07 No 0 0 No -18 0.47 No 47 70.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29108666 - NM_001005735 CHEK2 0 . . . 0.43 59.21 39 6.71 Yes 23 0.36 No 0 0 No -38 0.87 Yes 45 67.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47642760 + NM_000251 MSH2 0 . . . 3.6 85.02 32 6.08 Yes 4 1.05 Yes 0 0 No -31 0.79 Yes 54 74.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32894195 + NM_000059 BRCA2 0 . . . 0.42 74.05 39 7.72 Yes -3 0.09 No 0 0 No -43 0.34 No 54 71.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37075960 + NM_000249 MLH1 0 . . . 0.85 74.47 30 5.64 Yes 72 1.39 Yes 0 0 No -22 0.47 No 54 61.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215657059 - NM_000465 BARD1 0 . . . 1.19 74.13 33 6.3 Yes 55 -4.26 No 0 0 No -32 0.56 No 48 80.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32960238 + NM_000059 BRCA2 0 . . . 2.07 75.79 20 4.69 No 69 -5.14 No 0 0 No -19 0.82 Yes 47 79.95 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68704663 + NM_133509 RAD51B 0 . . . 0.07 65.12 27 5.2 No 34 1.3 Yes 0 0 No -59 0.6 No 38 49.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89686744 + NM_000314 PTEN 0 . . . 1.34 60.85 20 7.07 Yes 29 0.74 No 0 0 No -19 0.71 Yes 44 66.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69071619 + NM_133509 RAD51B 0 . . . 1.81 74.8 23 4.9 No 39 0.67 No 0 0 No -22 0.35 No 23 75.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131929107 + NM_005732 RAD50 0 . . . 3 68.66 26 5.29 No 16 0.33 No 0 0 No -25 0.78 Yes 42 65.07 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59922239 - NM_032043 BRIP1 0 . . . 5.31 84.64 13 5.16 No 66 0.79 Yes 0 0 No -25 0.55 No 49 48.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47667761 + NM_000251 MSH2 0 . . . 3.32 57.31 11 5.15 No 70 0.93 Yes 0 0 No -28 0.76 Yes 39 57.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6019157 - NM_000535 PMS2 0 . . . 4.66 67.04 25 6.4 Yes 44 0.54 No 0 0 No -24 0.84 Yes 44 94.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68776364 + NM_004360 CDH1 0 . . . 3.6 85.02 18 4.69 No 4 1.2 Yes 0 0 No -18 0.7 Yes 54 80 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68974116 + NM_133509 RAD51B 0 . . . 5.27 82.12 23 5.94 Yes 10 0.68 No 0 0 No -22 0.7 Yes 36 53.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41213116 - NM_007294 BRCA1 0 . . . 10.58 88.6 15 4.26 No 54 0.62 No 0 0 No -14 0.33 No 44 67.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68486617 + NM_133509 RAD51B 0 . . . 6.46 78.23 34 6.24 Yes 46 -3.03 No 0 0 No -29 0.75 Yes 43 23.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68947004 + NM_133509 RAD51B 0 . . . 0.27 74.73 14 4.12 No 37 1.27 Yes 0 0 No -13 0.72 Yes 21 84.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90959756 - NM_002485 NBN 0 . . . 4.24 85.09 19 4.9 No 33 1.42 Yes 0 0 No -21 0.56 No 51 69.32 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59766971 - NM_032043 BRIP1 0 . . . 3.37 83.78 13 4.8 No 73 0.38 No 0 0 No -55 0.46 No 53 60.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152366993 - NM_005431 XRCC2 0 . . . 2.41 0 17 3.51 No 43 1.72 Yes 0 0 No -19 0.57 No 15 83.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68416381 + NM_133509 RAD51B 0 . . . 0.13 77.71 21 4.77 No 51 1.35 Yes 0 0 No -20 0.64 No 42 47.16 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68328264 + NM_133509 RAD51B 0 . . . 2.16 76.63 22 4.58 No 75 0.58 No 0 0 No -32 0.67 Yes 42 69.91 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68740862 + NM_133509 RAD51B 0 . . . 9.94 87.64 26 5.35 No 46 1.64 Yes 0 0 No -24 0.56 No 40 42.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69065411 + NM_133509 RAD51B 0 . . . 1.81 69.48 9 4.9 No 47 -4.42 No 0 0 No -23 0.28 No 44 48.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190666888 + NM_000534 PMS1 0 . . . 3.36 71.38 16 4.69 No 65 0.9 Yes 0 0 No -15 0.65 No 47 69.74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215619865 - NM_000465 BARD1 0 . . . 4.8 79.29 40 7.62 Yes 61 1.94 Yes 0 0 No -34 0.57 No 42 62.93 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47766414 + NM_000251 MSH2 0 . . . 5.38 82.26 28 5.75 Yes 46 1.14 Yes 0 0 No -27 0.56 No 45 77.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68694326 + NM_133509 RAD51B 0 . . . 4.94 82.41 22 4.8 No 4 0.88 Yes 0 0 No -21 0.84 Yes 47 49.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59773743 - NM_032043 BRIP1 0 . . . 3.02 72.66 35 5.79 Yes 60 -2.92 No 0 0 No -22 0.32 No 47 72.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59767126 - NM_032043 BRIP1 0 . . . 5.23 71.34 29 7.08 Yes 37 0.97 Yes 0 0 No -24 0.82 Yes 40 87.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89689664 + NM_000314 PTEN 0 . . . 8.71 90.62 29 6.75 Yes 31 0.49 No 0 0 No -28 0.57 No 54 36.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68575150 + NM_133509 RAD51B 0 . . . 0.67 60.5 17 6.08 Yes 54 0.71 No 0 0 No -16 0.76 Yes 53 42.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68737427 + NM_133509 RAD51B 0 . . . 3.12 80.03 38 3.83 No -1 0.21 No 0 0 No -23 0.91 Yes 46 85.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68371600 + NM_133509 RAD51B 0 . . . 7.52 82.74 26 5.29 No 47 -1.78 No 0 0 No -25 0.45 No 44 72.83 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47663824 + NM_000251 MSH2 0 . . . 8.72 84.1 32 6.1 Yes 8 0.4 No 0 0 No -25 0.57 No 36 42.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37074118 + NM_000249 MLH1 0 . . . 3.04 73.37 22 6.83 Yes 3 1.34 Yes 0 0 No -21 0.93 Yes 39 32.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 6011444 - NM_000535 PMS2 0 . . . 5.92 82.31 20 5.97 Yes 58 1.16 Yes 0 0 No -23 0.42 No 40 94.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89661511 + NM_000314 PTEN 0 . . . 2.88 79.91 26 5.38 No 33 0.37 No 0 0 No -24 0.61 No 44 52.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40992817 + NM_001164269 RAD51 0 . . . 2.39 62.19 36 5.68 Yes 19 1.09 Yes 0 0 No -28 0.53 No 39 96.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84397436 - NM_139076 FAM175A 0 . . . 8.56 87.85 30 5.8 Yes 46 0.42 No 0 0 No -30 0.6 No 42 73.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47653307 + NM_000251 MSH2 0 . . . 2.3 84.41 12 4.24 No 14 0.9 Yes 0 0 No -24 0.79 Yes 43 73.74 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215637895 - NM_000465 BARD1 0 . . . 4.45 69.48 25 4.5 No 58 0.77 Yes 0 0 No -24 0.56 No 31 67.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68861275 + NM_133509 RAD51B 0 . . . 1.31 58.22 27 6.16 Yes 47 0.71 No 0 0 No -24 0.53 No 26 45.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48015575 + NM_000179 MSH6 0 . . . 4.2 85.02 26 8.54 Yes 4 1.12 Yes 0 0 No -25 0.93 Yes 54 73.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23635881 - NM_024675 PALB2 0 . . . 2.23 75.81 30 6.8 Yes 67 -4.97 No 0 0 No -29 0.9 Yes 48 80.01 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59930409 - NM_032043 BRIP1 0 . . . 4.54 72.8 27 5.2 No 39 0.88 Yes 0 0 No -26 0.61 No 55 34.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21968277 - NM_000077 CDKN2A 0 . . . 6.41 87.87 24 4.77 No 62 -4.58 No 28 0.97 Yes -23 0.37 No 45 44.33 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 75488758 - NM_001040108 MLH3 0 . . . 6.63 78.42 22 5.83 Yes 75 0.9 Yes 0 0 No -21 0.9 Yes 47 60.51 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56774783 + NM_058216 RAD51C 0 . . . 0.52 74.68 22 4.84 No 53 0.2 No 0 0 No -21 0.43 No 47 93.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32916514 + NM_000059 BRCA2 0 . . . 10.48 92.06 14 4.23 No 19 0.63 No 0 0 No -22 0.53 No 38 66.08 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68323401 + NM_133509 RAD51B 0 . . . 0.6 68.59 17 4.59 No -2 1.01 Yes 0 0 No -22 0.38 No 60 65.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68895376 + NM_133509 RAD51B 0 . . . 1.29 73.34 16 4.6 No 57 0.8 Yes 0 0 No -27 0.81 Yes 30 58.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68625741 + NM_133509 RAD51B 0 . . . 8.84 83.28 20 4.58 No 27 0.24 No 0 0 No -19 0.92 Yes 31 73.08 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89727711 + NM_000314 PTEN 0 . . . 0.58 67.71 19 5 No 44 0.72 No 0 0 No -18 0.47 No 47 60.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59938622 - NM_032043 BRIP1 0 . . . 2.36 74 40 6.99 Yes 56 0 No 0 0 No -39 0.63 No 42 71.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68357784 + NM_133509 RAD51B 0 . . . 0.12 79.12 26 4.94 No 69 0.41 No 0 0 No -59 0.43 No 43 73.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68314078 + NM_133509 RAD51B 0 . . . 8.58 79.16 43 6.55 Yes 70 0.94 Yes 0 0 No -40 0.48 No 14 75.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68955765 + NM_133509 RAD51B 0 . . . 5.54 86.2 21 5.16 No 9 1.03 Yes 0 0 No -20 0.55 No 49 87.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84401767 - NM_139076 FAM175A 0 . . . 5.07 77.89 21 5.1 No 11 0.13 No 0 0 No -20 0.64 No 38 48.21 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68898285 + NM_133509 RAD51B 0 . . . 1.78 74.24 36 7.01 Yes 53 0.53 No 0 0 No -35 0.7 Yes 50 93.1 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68631658 + NM_133509 RAD51B 0 . . . 0.72 67.71 20 5.1 No 73 1.14 Yes 0 0 No -39 0.45 No 37 44.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108144864 + NM_000051 ATM 0 . . . 7.91 82.38 27 5.78 Yes 0 0.22 No 0 0 No -26 0.92 Yes 47 71.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215601811 - NM_000465 BARD1 0 . . . 0.73 81.71 20 4.38 No 47 0.84 Yes 0 0 No -20 0.85 Yes 51 75.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59891846 - NM_032043 BRIP1 0 . . . 4.05 81.29 33 6.39 Yes 44 0.42 No 0 0 No -32 0.83 Yes 46 54.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59765116 - NM_032043 BRIP1 0 . . . 6.6 84.92 26 4.56 No 31 -1.39 No 0 0 No -18 0.53 No 43 64.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69004298 + NM_133509 RAD51B 0 . . . 6.58 74.18 14 4.47 No 42 1.39 Yes 0 0 No -39 0.62 No 27 65.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68719429 + NM_133509 RAD51B 0 . . . 4.37 69.28 35 7.29 Yes 54 0.65 No 0 0 No -34 0.6 No 37 48.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104164194 - NM_001100119 XRCC3 0 . . . 5.11 76.44 9 6.32 Yes NA NA NA 0 0 No -33 0.52 No 53 74.65 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32973839 + NM_000059 BRCA2 0 . . . 1.17 0 22 4.51 No 21 1.68 Yes 0 0 No -21 0.62 No 37 88.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152361920 - NM_005431 XRCC2 0 . . . 4.41 82.82 16 4.99 No 10 0.42 No 0 0 No -20 0.63 No 48 67.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131914268 + NM_005732 RAD50 0 . . . 8.37 93.31 47 6.52 Yes 56 1.29 Yes 0 0 No -25 0.64 No 43 20.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108238662 + NM_000051 ATM 0 . . . 2.47 64.81 30 5.47 No 7 0.35 No 0 0 No -29 0.81 Yes 47 55.19 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68307954 + NM_133509 RAD51B 0 . . . 0.29 74.94 29 5.32 No 33 0.59 No 0 0 No -25 0.58 No 40 56.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68500807 + NM_133509 RAD51B 0 . . . 1.9 0 47 6.9 Yes 15 1.55 Yes 0 0 No -34 0.48 No 36 54.77 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108111422 + NM_000051 ATM 0 . . . 3.89 72.81 38 6.32 Yes 49 -3.16 No 0 0 No -37 0.67 Yes 53 35.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68899324 + NM_133509 RAD51B 0 . . . 7.72 77.55 14 4.96 No 69 0.65 No 0 0 No -23 0.65 No 33 91.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68999289 + NM_133509 RAD51B 0 . . . 3.16 69.03 14 4.47 No -2 0.8 Yes 0 0 No -55 0.65 No 35 55.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68674468 + NM_133509 RAD51B 0 . . . 1.66 76.08 9 4.71 No 66 -5.58 No 0 0 No -22 0.52 No 52 54.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32903842 + NM_000059 BRCA2 0 . . . 3.17 63.41 28 4.05 No 39 0.64 No 0 0 No -27 0.92 Yes 41 59.71 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29110875 - NM_001005735 CHEK2 0 . . . 2.32 85 23 5.39 No -1 0.4 No 0 0 No -22 0.69 Yes 51 42.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131940918 + NM_005732 RAD50 0 . . . 4.95 84.94 28 5.29 No 4 1.25 Yes 0 0 No -27 0.82 Yes 54 70.2 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47768098 + NM_000251 MSH2 0 . . . 2.19 68.48 13 5.64 Yes 48 0.76 No 0 0 No -35 0.76 Yes 46 79.17 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108235108 + NM_000051 ATM 0 . . . 2.35 70.2 16 5.37 No 60 1.18 Yes 0 0 No -22 0.51 No 45 47.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1218275 + NM_000455 STK11 0 . . . 6.65 81.74 28 6.24 Yes 68 0.2 No 0 0 No -27 0.91 Yes 53 68.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190656889 + NM_000534 PMS1 0 . . . 3.25 75.31 43 6.56 Yes 74 -5.05 No 0 0 No -33 0.47 No 47 56.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108156022 + NM_000051 ATM 0 . . . 5.87 84.85 33 6.24 Yes 21 0.56 No 0 0 No -32 0.84 Yes 41 93.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68427404 + NM_133509 RAD51B 0 . . . 11.43 87.44 14 5.49 No 26 0.96 Yes 0 0 No -24 0.55 No 32 74.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45805791 - NM_001048171 MUTYH 0 . . . 3.17 77.54 55 5.47 No 51 -1.35 No 24 0.48 Yes -35 0.69 Yes 49 86.76 Yes BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: Yes chr2 47665822 + NM_000251 MSH2 0 . . . 3.14 56.23 14 5.18 No 10 0.3 No 0 0 No -20 0.68 Yes 48 91.87 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69112014 + NM_133509 RAD51B 0 . . . 2.24 73.18 12 4.24 No 23 0.52 No 0 0 No -48 0.86 Yes 52 82.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68547213 + NM_133509 RAD51B 0 . . . 2.66 74.76 43 8.81 Yes 34 1 Yes 0 0 No -42 0.76 Yes 31 63.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68636285 + NM_133509 RAD51B 0 . . . 2.81 66.41 20 4.9 No 71 1.02 Yes 0 0 No -19 0.45 No 44 48.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69090014 + NM_133509 RAD51B 0 . . . 4.74 75.88 16 4.69 No 0 0.34 No 0 0 No -15 0.51 No 47 81.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68382067 + NM_133509 RAD51B 0 . . . 0.9 78.28 18 4.68 No 4 0.64 No 0 0 No -22 0.59 No 50 55.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59767179 - NM_032043 BRIP1 0 . . . 1.12 81.83 42 6.85 Yes 34 1.24 Yes 0 0 No -33 0.5 No 24 87.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69051095 + NM_133509 RAD51B 0 . . . 0.12 0 33 6.64 Yes 18 1.61 Yes 0 0 No -28 0.71 Yes 40 85.85 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94207856 - NM_005591 MRE11 0 . . . 1.89 74.35 19 4.97 No 9 1.1 Yes 0 0 No -32 0.28 No 49 82.61 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56769101 + NM_058216 RAD51C 0 . . . 1.84 75.58 29 3.41 No 19 0.37 No 0 0 No -28 0.54 No 50 78.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59938375 - NM_032043 BRIP1 0 . . . 0.17 62.93 28 5.48 No 57 0.86 Yes 0 0 No -27 0.8 Yes 38 46.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59847706 - NM_032043 BRIP1 0 . . . 5.1 77.84 27 5.17 No 64 0.99 Yes 0 0 No -26 0.8 Yes 34 59.91 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68402841 + NM_133509 RAD51B 0 . . . 6.5 81.16 16 4.87 No 37 0.69 No 0 0 No -23 0.48 No 43 83.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68524533 + NM_133509 RAD51B 0 . . . 5.67 74.14 43 7.48 Yes -3 1.81 Yes 0 0 No -42 0.55 No 40 82.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68931593 + NM_133509 RAD51B 0 . . . 4.4 77.31 29 5.86 Yes 64 1.44 Yes 0 0 No -17 0.36 No 51 79.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41011374 + NM_001164269 RAD51 0 . . . 1.85 80.9 18 4.43 No 33 0.21 No 0 0 No -24 0.73 Yes 51 36.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68534982 + NM_133509 RAD51B 0 . . . 2.53 68.06 22 4.69 No 37 0.58 No 0 0 No -21 0.95 Yes 45 72.1 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69128195 + NM_133509 RAD51B 0 . . . 2.72 73.21 33 7.1 Yes 40 0.89 Yes 0 0 No -32 0.68 Yes 34 67.15 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89637769 + NM_000314 PTEN 0 . . . 2.03 61.06 23 6.46 Yes 30 0.02 No 0 0 No -22 0.54 No 38 48.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47711383 + NM_000251 MSH2 0 . . . 5.4 75.11 18 4.47 No 70 -4.19 No 0 0 No -38 0.75 Yes 38 61.42 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59897635 - NM_032043 BRIP1 0 . . . 5.65 0 30 8.01 Yes 15 0.44 No 0 0 No -23 0.48 No 43 83.32 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47732167 + NM_000251 MSH2 0 . . . 0.09 0 14 4.47 No 55 1.38 Yes 0 0 No -43 0.73 Yes 41 67.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190648542 + NM_000534 PMS1 0 . . . 5.62 80.36 18 5.32 No 4 1.07 Yes 0 0 No -23 0.79 Yes 54 67.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190689541 + NM_000534 PMS1 0 . . . 7.39 76.71 19 4.58 No 23 0.76 No 0 0 No -18 0.95 Yes 35 95.77 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190654282 + NM_000534 PMS1 0 . . . 5.67 81.74 19 4.36 No 42 -2.84 No 0 0 No -33 0.45 No 42 76.14 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68555129 + NM_133509 RAD51B 0 . . . 5.96 86.29 25 6.95 Yes 48 1.02 Yes 0 0 No -24 0.82 Yes 49 93.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68398430 + NM_133509 RAD51B 0 . . . 0.42 74.73 38 8.6 Yes 33 1.19 Yes 0 0 No -37 0.88 Yes 25 59.14 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68449527 + NM_133509 RAD51B 0 . . . 5.46 86.63 23 5.2 No 4 0.64 No 0 0 No -23 0.65 No 54 70.58 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68796394 + NM_133509 RAD51B 0 . . . 0.18 69.1 27 4.76 No 62 0.26 No 0 0 No -27 0.65 No 44 76.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59934984 - NM_032043 BRIP1 0 . . . 1.08 84.22 28 6.91 Yes 43 1.58 Yes 0 0 No -28 0.4 No 25 46.52 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29131310 - NM_001005735 CHEK2 0 . . . 0.84 65.32 51 9.49 Yes 16 0.57 No 0 0 No -50 0.35 No 42 88.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40996888 + NM_001164269 RAD51 0 . . . 4.74 84.41 23 6.02 Yes 9 1.48 Yes 0 0 No -23 0.55 No 49 77.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59806149 - NM_032043 BRIP1 0 . . . 4.76 85.52 15 4.78 No 6 1.46 Yes 0 0 No -27 0.8 Yes 43 61.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68867895 + NM_133509 RAD51B 0 . . . 7.42 72.15 37 6.83 Yes 33 0.94 Yes 0 0 No -31 0.73 Yes 44 63.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215647840 - NM_000465 BARD1 0 . . . 8.53 92.48 66 12.15 Yes 14 1.97 Yes 0 0 No -34 0.57 No 44 95.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68368977 + NM_133509 RAD51B 0 . . . 2.03 70.89 31 5.92 Yes 75 0.68 No 0 0 No -24 0.34 No 42 55.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32975151 + NM_000059 BRCA2 0 . . . 0.6 70.36 42 5.16 No 66 -4.74 No 0 0 No -36 0.29 No 48 64.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69149658 + NM_133509 RAD51B 0 . . . 1.08 0 35 5.87 Yes 61 0.72 No 0 0 No -35 0.44 No 34 96.68 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40986553 + NM_001164269 RAD51 0 . . . 2.58 72.7 16 5.02 No 67 1.8 Yes 0 0 No -20 0.84 Yes 45 34.86 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108162127 + NM_000051 ATM 0 . . . 3.66 66.08 10 4.9 No 72 0.4 No 0 0 No -26 0.8 Yes 34 69.08 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68841422 + NM_133509 RAD51B 0 . . . 1.92 68.66 57 7.12 Yes 7 -1.82 No 0 0 No -40 0.68 Yes 48 88.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75483727 - NM_001040108 MLH3 0 . . . 3.55 74.91 34 6.27 Yes 47 -4.12 No 0 0 No -19 0.49 No 51 75.29 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68851055 + NM_004360 CDH1 0 . . . 8.39 79.46 23 5.55 No 66 0.82 Yes 0 0 No -26 0.68 Yes 42 92.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68885554 + NM_133509 RAD51B 0 . . . 1.83 71.26 47 6.1 Yes 42 -4.56 No 0 0 No -23 0.9 Yes 37 15.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 7588687 - NM_000546 TP53 0 . . . 3.77 74.64 46 7.5 Yes 14 1.63 Yes 0 0 No -20 0.5 No 44 85.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94226502 - NM_005591 MRE11 0 . . . 6.05 74.02 10 3.77 No 18 0.35 No 0 0 No -31 0.67 Yes 39 39.56 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68789652 + NM_004360 CDH1 0 . . . 0.16 83.88 17 4.8 No 52 0.99 Yes 0 0 No -19 0.4 No 12 37.34 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215603625 - NM_000465 BARD1 0 . . . 7.55 84.47 15 6.58 Yes 53 1.12 Yes 0 0 No -31 0.53 No 42 83.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68386137 + NM_133509 RAD51B 0 . . . 1.99 0 18 5.49 No 59 -0.35 No 0 0 No -28 0.92 Yes 17 92.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32970776 + NM_000059 BRCA2 0 . . . 1.99 60.97 18 5.29 No 44 0.22 No 0 0 No -26 0.64 No 49 34.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 104169449 - NM_001100119 XRCC3 0 . . . 0.09 69.03 31 6.11 Yes 70 -5.02 No 0 0 No -27 0.72 Yes 50 25.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68496116 + NM_133509 RAD51B 0 . . . 8.11 80.9 31 6.98 Yes 12 1.24 Yes 0 0 No -30 0.64 No 46 75.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215594326 - NM_000465 BARD1 0 . . . 2.39 67.94 30 5.85 Yes 36 0.34 No 0 0 No -26 0.3 No 45 40.54 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152351088 - NM_005431 XRCC2 0 . . . 2.77 82.84 23 6.36 Yes 33 1.02 Yes 0 0 No -22 0.76 Yes 20 49.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68966617 + NM_133509 RAD51B 0 . . . 7.04 83.93 18 5.05 No 70 -4 No 0 0 No -18 0.43 No 45 83.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6028533 - NM_000535 PMS2 0 . . . 2.39 76.63 30 5.49 No 67 -4.96 No 0 0 No -33 0.58 No 43 71.03 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68823324 + NM_133509 RAD51B 0 . . . 3.33 78.47 19 5 No 64 -6.23 No 0 0 No -18 0.4 No 48 67.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47671936 + NM_000251 MSH2 0 . . . 2.76 84.41 23 4.98 No 50 1.18 Yes 0 0 No -22 0.89 Yes 33 79.17 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68478773 + NM_133509 RAD51B 0 . . . 4 86.66 13 4.8 No -1 0.42 No 0 0 No -19 0.47 No 45 64.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68600612 + NM_133509 RAD51B 0 . . . 3.93 83.08 23 5.47 No 56 -4.4 No 0 0 No -27 0.38 No 42 60.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47673223 + NM_000251 MSH2 0 . . . 4.58 87.85 21 3.71 No 43 0.51 No 0 0 No -24 0.95 Yes 15 77.2 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59773486 - NM_032043 BRIP1 0 . . . 0.74 69.73 25 5.03 No 46 0.08 No 0 0 No -8 0.41 No 64 39.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94214229 - NM_005591 MRE11 0 . . . 2.41 68.34 10 5.1 No 23 1.57 Yes 0 0 No -40 0.71 Yes 40 59.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47774411 + NM_000251 MSH2 0 . . . 5.78 79.12 24 5.3 No -2 1.23 Yes 0 0 No -23 0.55 No 45 63.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68977981 + NM_133509 RAD51B 0 . . . 5.71 86 17 4.69 No -1 0.23 No 0 0 No -19 0.27 No 45 73.64 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190681120 + NM_000534 PMS1 0 . . . 4.99 0 17 4.24 No 53 0.91 Yes 0 0 No -25 0.4 No 41 53.19 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56781496 + NM_058216 RAD51C 0 . . . 6.25 79.67 17 4.64 No 21 1.1 Yes 0 0 No -39 0.82 Yes 37 74.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131924795 + NM_005732 RAD50 0 . . . 4.59 76.62 14 5.1 No 15 0.7 No 0 0 No -17 0.28 No 48 49.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68735553 + NM_133509 RAD51B 0 . . . 1.2 70.93 29 5.29 No 57 1.21 Yes 0 0 No -28 0.6 No 48 56.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59777065 - NM_032043 BRIP1 0 . . . 0.73 65.65 23 5.39 No 66 0.59 No 0 0 No -22 0.88 Yes 47 72.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89696897 + NM_000314 PTEN 0 . . . 0.53 82.21 29 5.31 No 7 0.46 No 0 0 No -21 0.76 Yes 51 57.72 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131971852 + NM_005732 RAD50 0 . . . 2.23 72.74 38 6.02 Yes 20 1.3 Yes 0 0 No -25 0.4 No 38 73.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59939783 - NM_032043 BRIP1 0 . . . 3.94 69.1 16 4.69 No 10 1.02 Yes 0 0 No -42 0.6 No 48 90.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190734138 + NM_000534 PMS1 0 . . . 0.91 64.45 20 7.09 Yes 55 0.5 No 0 0 No -30 0.63 No 38 84.9 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68954908 + NM_133509 RAD51B 0 . . . 10.53 89.44 26 5.17 No 5 0.69 No 0 0 No -52 0.42 No 53 63.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59829471 - NM_032043 BRIP1 0 . . . 1.23 77.34 26 5.57 Yes 4 0.53 No 0 0 No -25 0.88 Yes 17 34.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215598127 - NM_000465 BARD1 0 . . . 1.02 62.96 10 5 No 70 -5.31 No 0 0 No -20 0.42 No 51 52.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89664890 + NM_000314 PTEN 0 . . . 4.05 74.11 20 7.14 Yes 36 1.12 Yes 0 0 No -19 0.58 No 37 72.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68688726 + NM_133509 RAD51B 0 . . . 1.52 72.67 36 6.31 Yes 9 0.46 No 0 0 No -23 0.64 No 49 40.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131926133 + NM_005732 RAD50 0 . . . 2.73 81.5 15 4.56 No 15 0.09 No 0 0 No -18 0.83 Yes 48 43.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69009728 + NM_133509 RAD51B 0 . . . 3.49 73.3 18 5.91 Yes 54 1.68 Yes 0 0 No -28 0.52 No 36 68.86 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68430289 + NM_133509 RAD51B 0 . . . 4.98 68.54 19 5.78 Yes 19 1.74 Yes 0 0 No -18 0.64 No 33 65.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47637140 + NM_000251 MSH2 0 . . . 3.33 76.06 35 5.93 Yes 38 0.42 No 0 0 No -34 0.84 Yes 56 23.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460132 + NM_133509 RAD51B 0 . . . 7.7 80.29 41 6.86 Yes 38 1.16 Yes 0 0 No -40 0.81 Yes 44 68.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68817423 + NM_133509 RAD51B 0 . . . 2.49 80.72 34 5.18 No 43 -3.53 No 0 0 No -27 0.64 No 52 51.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108126604 + NM_000051 ATM 0 . . . 5.48 73.75 31 4.95 No 29 0.88 Yes 0 0 No -25 0.45 No 44 69.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90964837 - NM_002485 NBN 0 . . . 5.11 83.97 22 4.79 No 53 0.55 No 0 0 No -21 0.94 Yes 43 86.33 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32936573 + NM_000059 BRCA2 0 . . . 1.49 63.71 15 4.11 No 53 0.31 No 0 0 No -20 0.79 Yes 40 91.57 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108183009 + NM_000051 ATM 0 . . . 2.56 75.27 23 3.56 No 35 0.58 No 0 0 No -22 0.6 No 43 31.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84385642 - NM_139076 FAM175A 0 . . . 9.29 79.19 12 4.54 No 12 0.98 Yes 0 0 No -17 0.72 Yes 46 93.9 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37057388 + NM_000249 MLH1 0 . . . 1.76 63.51 41 6.63 Yes 69 0.9 Yes 0 0 No -40 0.66 No 46 30.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69032661 + NM_133509 RAD51B 0 . . . 2.34 79.77 25 4.9 No 33 -0.7 No 0 0 No -24 0.85 Yes 25 33.13 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131897528 + NM_005732 RAD50 0 . . . 0.06 64.48 46 6.98 Yes 56 1.01 Yes 0 0 No -39 0.35 No 45 58.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59892344 - NM_032043 BRIP1 0 . . . 4.63 69.31 33 4.29 No 38 1.51 Yes 0 0 No -26 0.74 Yes 39 70.35 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108158045 + NM_000051 ATM 0 . . . 1.92 63.88 22 4.11 No 64 -5.19 No 0 0 No -39 0.72 Yes 45 61.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68418078 + NM_133509 RAD51B 0 . . . 9.23 79.38 34 7.62 Yes 23 0.72 No 0 0 No -33 0.7 Yes 45 65.22 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68956109 + NM_133509 RAD51B 0 . . . 3.79 70.42 32 6.32 Yes 76 -3.23 No 0 0 No -31 0.72 Yes 45 89.07 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68706697 + NM_133509 RAD51B 0 . . . 4.77 84.22 12 5.29 No 41 0.26 No 0 0 No -25 0.52 No 51 61.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68842470 + NM_004360 CDH1 0 . . . 4.22 70.28 22 5 No 36 -1.31 No 0 0 No -21 0.67 Yes 38 29.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68829212 + NM_133509 RAD51B 0 . . . 4.64 80.63 17 4.8 No 75 0.02 No 0 0 No -17 0.71 Yes 54 48.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68962189 + NM_133509 RAD51B 0 . . . 4.99 83.41 65 9.1 Yes 58 -2.81 No 0 0 No -25 0.67 Yes 38 35.62 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69084146 + NM_133509 RAD51B 0 . . . 5.38 78.43 43 4.97 No -2 0.9 Yes 0 0 No -46 0.64 No 40 64.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68751345 + NM_133509 RAD51B 0 . . . 0.12 0 16 6.5 Yes 55 0.24 No 0 0 No -29 0.53 No 32 52.5 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68435347 + NM_133509 RAD51B 0 . . . 5.18 0 25 5 No 10 0.63 No 0 0 No -25 0.5 No 39 79.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131981634 + NM_005732 RAD50 0 . . . 0.12 62.19 37 7.34 Yes 24 1.09 Yes 0 0 No -36 0.84 Yes 34 70.25 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23622333 - NM_024675 PALB2 0 . . . 5.88 84.17 63 8.31 Yes 52 1.22 Yes 0 0 No -40 0.7 Yes 43 66.29 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68534853 + NM_133509 RAD51B 0 . . . 2.88 81.74 37 7.31 Yes 8 0.12 No 0 0 No -36 0.32 No 43 68.03 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89647665 + NM_000314 PTEN 0 . . . 5.9 88.96 24 5.29 No -3 0.7 No 0 0 No -23 0.42 No 43 71.47 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104178837 - NM_001100119 XRCC3 0 . . . 0.22 72.69 29 7.13 Yes 1 1.42 Yes 0 0 No -28 0.68 Yes 51 71.69 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69114173 + NM_133509 RAD51B 0 . . . 5.17 80.43 26 5.99 Yes 12 0.69 No 0 0 No -20 0.37 No 46 85.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68362807 + NM_133509 RAD51B 0 . . . 0.03 70.01 18 5.23 No 25 0.91 Yes 0 0 No -17 0.29 No 47 30.27 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94199568 - NM_005591 MRE11 0 . . . 4.16 65.76 13 5.14 No 27 1.17 Yes 0 0 No -24 0.4 No 31 91.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69105355 + NM_133509 RAD51B 0 . . . 1.39 76.56 17 4.58 No 69 -3.24 No 0 0 No -17 0.8 Yes 37 54.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68559338 + NM_133509 RAD51B 0 . . . 2.48 69.07 47 6.77 Yes 41 0.91 Yes 0 0 No -26 0.63 No 34 84.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68619542 + NM_133509 RAD51B 0 . . . 4.53 82.06 21 4.84 No -3 -0.59 No 0 0 No -25 0.45 No 51 56.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68663200 + NM_133509 RAD51B 0 . . . 7.33 84.26 29 5.74 Yes 20 1.81 Yes 0 0 No -56 0.91 Yes 38 97.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215669808 - NM_000465 BARD1 0 . . . 6.92 85.4 23 5.31 No 9 1.07 Yes 0 0 No -22 0.5 No 49 86.28 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47728667 + NM_000251 MSH2 0 . . . 5.13 85.23 10 4.02 No 4 0.54 No 0 0 No -20 0.51 No 54 67.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90964495 - NM_002485 NBN 0 . . . 10.26 95.18 30 5.54 No 2 1.05 Yes 0 0 No -30 0.41 No 42 87.02 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68469061 + NM_133509 RAD51B 0 . . . 1.39 81.23 15 5.1 No 41 0.72 No 0 0 No -19 0.55 No 45 67.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108181247 + NM_000051 ATM 0 . . . 2.57 80.41 30 5.51 No 26 0.7 No 0 0 No -29 0.87 Yes 49 61.52 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59938337 - NM_032043 BRIP1 0 . . . 9.02 82.3 29 5.06 No 11 1.17 Yes 0 0 No -28 0.94 Yes 47 58.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29093689 - NM_001005735 CHEK2 0 . . . 4.92 67.41 30 4.54 No 59 0.02 No 0 0 No -22 0.46 No 40 61.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23644222 - NM_024675 PALB2 0 . . . 3.24 75.18 22 5.63 Yes 33 1.01 Yes 0 0 No -21 0.62 No 42 58.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69037312 + NM_133509 RAD51B 0 . . . 4.19 77.68 23 4.8 No 68 -2.81 No 0 0 No -22 0.81 Yes 41 73.94 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108153503 + NM_000051 ATM 0 . . . 6.61 69.85 35 6.07 Yes 73 1.37 Yes 0 0 No -34 0.77 Yes 54 43.34 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33448054 - NM_002878 RAD51D 0 . . . 0.42 65.44 26 5.93 Yes 13 0.59 No 0 0 No -25 0.57 No 45 52.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68797874 + NM_004360 CDH1 0 . . . 0.31 62.53 19 4.62 No 73 0.34 No 0 0 No -48 0.64 No 46 38.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89654155 + NM_000314 PTEN 0 . . . 5.21 78.32 13 3.49 No 51 0.33 No 0 0 No -18 0.46 No 50 69.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47785751 + NM_000251 MSH2 0 . . . 0.15 75.77 30 5.2 No 73 0.44 No 0 0 No -27 0.69 Yes 52 42.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68881913 + NM_133509 RAD51B 0 . . . 5.2 81.82 18 6.07 Yes 16 0.52 No 0 0 No -17 0.65 No 48 68.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21982246 - NM_000077 CDKN2A 0 . . . 4.27 76.21 15 5.47 No 1 1.5 Yes 0 0 No -23 0.65 No 44 66.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23637224 - NM_024675 PALB2 0 . . . 5.63 87.68 21 4.65 No 10 1.11 Yes 0 0 No -20 0.39 No 48 95.55 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52437086 - NM_004656 BAP1 0 . . . 5.77 86.92 27 4.24 No 4 1.2 Yes 0 0 No -20 0.35 No 47 63.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29098063 - NM_001005735 CHEK2 0 . . . 3.36 77.51 21 4.9 No 30 -3.08 No 0 0 No -20 0.8 Yes 44 70.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47724717 + NM_000251 MSH2 0 . . . 2.55 80.12 17 4.98 No 28 1.31 Yes 0 0 No -23 0.75 Yes 30 93.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89659462 + NM_000314 PTEN 0 . . . 0.15 0 21 5.09 No 2 0.94 Yes 0 0 No -20 0.5 No 18 36.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29131367 - NM_001005735 CHEK2 0 . . . 2.42 78.96 25 6.42 Yes 65 -2.94 No 0 0 No -24 0.55 No 44 58.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69143581 + NM_133509 RAD51B 0 . . . 8.45 85.97 35 5.76 Yes 42 1.26 Yes 0 0 No -34 0.74 Yes 49 50.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37048942 + NM_000249 MLH1 0 . . . 3.34 66.64 40 6.48 Yes 17 1.73 Yes 0 0 No -39 0.92 Yes 41 93.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68754136 + NM_133509 RAD51B 0 . . . 3.77 72.39 15 5.39 No 45 0.47 No 0 0 No -56 0.31 No 53 33.56 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21982825 - NM_000077 CDKN2A 0 . . . 4.65 66.12 11 5 No 47 1.38 Yes 0 0 No -47 0.5 No 47 78.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68908468 + NM_133509 RAD51B 0 . . . 1.6 73.48 30 6.39 Yes 12 0.75 No 0 0 No -29 0.34 No 50 68.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68323040 + NM_133509 RAD51B 0 . . . 2.12 83.96 20 4.58 No 42 0.08 No 0 0 No -19 0.74 Yes 47 67.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69034460 + NM_133509 RAD51B 0 . . . 4.56 70.89 30 6 Yes 4 0.24 No 0 0 No -29 0.85 Yes 54 55.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131943858 + NM_005732 RAD50 0 . . . 1.66 66 20 4.58 No 7 0.32 No 0 0 No -19 0.63 No 45 72.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108164576 + NM_000051 ATM 0 . . . 3.98 77.77 23 5 No 15 0.33 No 0 0 No -20 0.64 No 47 48.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7575345 - NM_000546 TP53 0 . . . 1.02 0 15 4.47 No 38 1.47 Yes 0 0 No -35 0.82 Yes 44 37.79 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68959755 + NM_133509 RAD51B 0 . . . 0.05 0 14 4.47 No 56 0.12 No 0 0 No -21 0.45 No 13 34.48 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45803096 - NM_001048171 MUTYH 0 . . . 3.37 78.48 84 5.92 Yes 3 1.34 Yes 0 0 No -26 0.43 No 38 59.65 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7586147 - NM_000546 TP53 0 . . . 5.75 75.79 16 4.69 No 72 0.86 Yes 0 0 No -19 0.73 Yes 46 94.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89673585 + NM_000314 PTEN 0 . . . 3.91 74.77 29 7.31 Yes 70 0.53 No 0 0 No -28 0.94 Yes 51 62.9 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48027271 + NM_000179 MSH6 0 . . . 4.56 70.98 31 6.08 Yes 24 0.31 No 0 0 No -30 0.64 No 34 76.79 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69016317 + NM_133509 RAD51B 0 . . . 2.24 80.12 27 5.29 No 74 1.17 Yes 0 0 No -26 0.78 Yes 51 82.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68782591 + NM_133509 RAD51B 0 . . . 6.03 83.73 12 4.24 No 37 1.27 Yes 0 0 No -38 0.53 No 44 83.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59846442 - NM_032043 BRIP1 0 . . . 2.17 0 28 6.59 Yes 23 0.81 Yes 0 0 No -27 0.84 Yes 46 62.33 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 104167135 - NM_001100119 XRCC3 0 . . . 1.59 0 23 6.79 Yes 17 1.12 Yes 0 0 No -22 0.27 No 41 72.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105202190 + NM_021930 RINT1 0 . . . 2.81 85.02 23 5.63 Yes 4 0.62 No 0 0 No -22 0.87 Yes 49 52.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47660458 + NM_000251 MSH2 0 . . . 2.44 67.19 39 9.31 Yes 30 2.19 Yes 0 0 No -38 0.85 Yes 28 20.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48017312 + NM_000179 MSH6 0 . . . 0.09 74.68 21 4.37 No 4 0.41 No 0 0 No -21 0.4 No 54 83.74 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37061938 + NM_000249 MLH1 0 . . . 7.62 90.22 17 4.07 No 67 -3.44 No 0 0 No -60 0.55 No 45 42.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68817726 + NM_133509 RAD51B 0 . . . 3.39 80.28 50 9.72 Yes 13 0.42 No 0 0 No -49 0.36 No 45 95.07 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215600106 - NM_000465 BARD1 0 . . . 2.12 0 15 5.29 No 54 1 Yes 0 0 No -23 0.32 No 50 92.73 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68407001 + NM_133509 RAD51B 0 . . . 2.81 75.18 17 5.42 No 33 1.16 Yes 0 0 No -28 0.48 No 25 68.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23641694 - NM_024675 PALB2 0 . . . 7.29 80.28 18 4.8 No 13 0.94 Yes 0 0 No -22 0.52 No 53 46.59 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41244015 - NM_007294 BRCA1 0 . . . 4.22 80.05 23 5.83 Yes 16 0.17 No 0 0 No -22 0.82 Yes 48 56.99 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190707954 + NM_000534 PMS1 0 . . . 1.55 66.88 35 5.01 No 33 0.99 Yes 0 0 No -28 0.72 Yes 16 44.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59848399 - NM_032043 BRIP1 0 . . . 4.49 67.91 54 7.74 Yes 30 1.4 Yes 0 0 No -53 0.3 No 28 69.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41248791 - NM_007294 BRCA1 0 . . . 2.9 84.03 34 6.07 Yes -4 0.03 No 0 0 No -33 0.71 Yes 39 38.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89640142 + NM_000314 PTEN 0 . . . 5.14 81.42 31 6.75 Yes 3 0.72 No 0 0 No -30 0.58 No 44 86.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56810705 + NM_058216 RAD51C 0 . . . 0.87 53.91 25 6.98 Yes 10 0.45 No 0 0 No -24 0.71 Yes 43 63.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152357801 - NM_005431 XRCC2 0 . . . 1.93 71.47 22 7.15 Yes 57 0.23 No 0 0 No -21 0.43 No 46 28.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41212134 - NM_007294 BRCA1 0 . . . 1.43 80.22 38 8.33 Yes 61 0.23 No 0 0 No -37 0.57 No 48 62.68 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68424702 + NM_133509 RAD51B 0 . . . 4.44 79.24 25 5.57 Yes 10 0.76 No 0 0 No -24 0.56 No 48 93.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68311356 + NM_133509 RAD51B 0 . . . 6.62 85.86 36 7.93 Yes 59 0.41 No 0 0 No -35 0.75 Yes 46 69.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32971466 + NM_000059 BRCA2 0 . . . 1.34 68.23 29 6.2 Yes 19 0.51 No 0 0 No -28 0.55 No 47 35.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68999218 + NM_133509 RAD51B 0 . . . 3.29 74.77 13 3.22 No -2 0.48 No 0 0 No -43 0.36 No 43 74.67 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68765511 + NM_133509 RAD51B 0 . . . 8.99 85.9 23 4.57 No 18 0.3 No 0 0 No -22 0.93 Yes 40 81.03 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131977771 + NM_005732 RAD50 0 . . . 0.58 70.17 27 5.2 No -4 1.31 Yes 0 0 No -53 0.7 Yes 62 51.07 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105183932 + NM_021930 RINT1 0 . . . 2.35 70.4 9 3.87 No 27 1.51 Yes 0 0 No -21 0.49 No 47 56.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47759157 + NM_000251 MSH2 0 . . . 2.48 78.88 32 7.3 Yes 55 -5.15 No 0 0 No -31 0.97 Yes 48 82.59 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90974435 - NM_002485 NBN 0 . . . 3.12 77.81 44 7.33 Yes 62 -5.94 No 0 0 No -38 0.69 Yes 41 29.32 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68298496 + NM_133509 RAD51B 0 . . . 2.68 76.89 30 5.83 Yes 65 1.23 Yes 0 0 No -29 0.89 Yes 43 55.68 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68791016 + NM_004360 CDH1 0 . . . 2.15 0 58 7.81 Yes 16 1.42 Yes 0 0 No -47 0.61 No 42 74.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23630057 - NM_024675 PALB2 0 . . . 0.69 60.03 54 7.74 Yes 22 0.15 No 0 0 No -33 0.58 No 36 82.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68399425 + NM_133509 RAD51B 0 . . . 3.43 78.87 21 4.9 No 49 -4.07 No 0 0 No -20 0.64 No 46 83.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68601071 + NM_133509 RAD51B 0 . . . 7.98 81.16 36 5.89 Yes 6 0.88 Yes 0 0 No -25 0.59 No 40 71.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89706751 + NM_000314 PTEN 0 . . . 1.97 62.48 20 4.69 No 36 -4.55 No 0 0 No -20 0.7 Yes 45 46.94 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68802769 + NM_133509 RAD51B 0 . . . 7.89 79.79 16 4.69 No 5 1.08 Yes 0 0 No -37 0.45 No 52 62.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68332300 + NM_133509 RAD51B 0 . . . 5.76 89.33 22 5.64 Yes 52 0.71 No 0 0 No -21 0.76 Yes 44 61.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68455381 + NM_133509 RAD51B 0 . . . 3.79 88.81 16 5.08 No 32 0.64 No 0 0 No -24 0.27 No 52 35.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59827163 - NM_032043 BRIP1 0 . . . 5.45 88.21 23 7.02 Yes 70 -1.5 No 0 0 No -22 0.86 Yes 48 41.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152372469 - NM_005431 XRCC2 0 . . . 2.27 77.95 19 4.52 No 55 0.98 Yes 0 0 No -26 0.64 No 41 47.63 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23650153 - NM_024675 PALB2 0 . . . 6.53 84.42 31 5.95 Yes 20 0.95 Yes 0 0 No -36 0.46 No 52 74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84397378 - NM_139076 FAM175A 0 . . . 7.31 83.75 25 5.47 No 23 1.34 Yes 0 0 No -29 0.69 Yes 39 66.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59775433 - NM_032043 BRIP1 0 . . . 1.59 66.69 14 5.2 No 4 0.26 No 0 0 No -24 0.47 No 54 87.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68570950 + NM_133509 RAD51B 0 . . . 7.2 75.46 26 6.7 Yes 72 -3.58 No 0 0 No -31 0.61 No 35 85.26 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59807895 - NM_032043 BRIP1 0 . . . 7.38 73.63 49 8.46 Yes 69 1.15 Yes 0 0 No -26 0.66 Yes 38 62.08 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89671980 + NM_000314 PTEN 0 . . . 5.16 81.71 30 5.67 Yes 62 1.15 Yes 0 0 No -29 0.82 Yes 50 72.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59884454 - NM_032043 BRIP1 0 . . . 5.27 78.56 18 5.13 No 11 0.17 No 0 0 No -23 0.65 No 38 71.19 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7591014 - NM_000546 TP53 0 . . . 1.7 56.14 13 4.33 No 28 0.33 No 0 0 No -47 0.26 No 45 39.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68815615 + NM_133509 RAD51B 0 . . . 6.53 78.81 15 5.74 Yes 2 1.79 Yes 0 0 No -29 0.51 No 40 64.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131967075 + NM_005732 RAD50 0 . . . 2.95 70.85 29 5.9 Yes 23 1.43 Yes 0 0 No -28 0.62 No 40 58.81 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68405389 + NM_133509 RAD51B 0 . . . 3.14 76.53 14 4.89 No 37 0.85 Yes 0 0 No -7 0.28 No 60 51.29 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68850421 + NM_133509 RAD51B 0 . . . 4.56 77.34 30 4.55 No 29 0.41 No 0 0 No -27 0.35 No 42 77.81 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190673546 + NM_000534 PMS1 0 . . . 0.77 63.13 24 5.73 Yes 44 1.36 Yes 0 0 No -23 0.42 No 14 47.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131921797 + NM_005732 RAD50 0 . . . 5.29 77.57 15 4.62 No 70 0.61 No 0 0 No -26 0.53 No 52 65.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47698017 + NM_000251 MSH2 0 . . . 6.52 76.53 15 4.82 No 66 1.43 Yes 0 0 No -32 0.63 No 44 68.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108240190 + NM_000051 ATM 0 . . . 0.38 62.06 27 5.47 No 58 0.87 Yes 0 0 No -26 0.56 No 61 32.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47664167 + NM_000251 MSH2 0 . . . 7.05 80.74 28 7.34 Yes 57 -3.82 No 0 0 No -27 0.85 Yes 36 87.86 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48008290 + NM_000179 MSH6 0 . . . 1.05 54.5 29 6.32 Yes 24 1.02 Yes 0 0 No -28 0.8 Yes 45 56.99 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68305692 + NM_133509 RAD51B 0 . . . 6.78 75.79 24 5.29 No 70 0.46 No 0 0 No -26 0.77 Yes 39 44.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68796539 + NM_133509 RAD51B 0 . . . 2.8 69.9 35 4.28 No 21 1.08 Yes 0 0 No -28 0.88 Yes 37 41.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68521881 + NM_133509 RAD51B 0 . . . 4.27 71.57 20 5.83 Yes 55 -5.81 No 0 0 No -19 0.54 No 41 71.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90944506 - NM_002485 NBN 0 . . . 2 76.96 28 5.38 No 73 1.64 Yes 0 0 No -23 0.43 No 45 60.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69004187 + NM_133509 RAD51B 0 . . . 2.08 77.69 37 5.67 Yes 58 -3.88 No 0 0 No -34 0.59 No 43 68.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59777208 - NM_032043 BRIP1 0 . . . 2.03 71.44 46 7.73 Yes 69 -3.26 No 0 0 No -28 0.82 Yes 38 44.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41195972 - NM_007294 BRCA1 0 . . . 3 74.06 27 5.74 Yes 32 0.74 No 0 0 No -26 0.93 Yes 26 82.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37071251 + NM_000249 MLH1 0 . . . 2.58 81.82 23 4.06 No 46 2.1 Yes 0 0 No -49 0.38 No 49 92.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89687561 + NM_000314 PTEN 0 . . . 2.88 68.43 27 6.03 Yes 52 2.3 Yes 0 0 No -26 0.9 Yes 28 83.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48029681 + NM_000179 MSH6 0 . . . 5.23 78.59 10 5.57 Yes 34 1.17 Yes 0 0 No -24 0.51 No 24 59.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1215359 + NM_000455 STK11 0 . . . 0.78 67.62 46 6.7 Yes 17 -0.99 No 0 0 No -38 0.78 Yes 26 38.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47785355 + NM_000251 MSH2 0 . . . 9.59 94.98 33 5.83 Yes -3 0.23 No 0 0 No -29 0.44 No 52 63.01 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215666108 - NM_000465 BARD1 0 . . . 3.43 81.99 18 4.9 No 0 0.54 No 0 0 No -17 0.75 Yes 52 45.84 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69003273 + NM_133509 RAD51B 0 . . . 3.26 85.33 33 5.65 Yes 33 0.69 No 0 0 No -20 0.31 No 47 60.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75510691 - NM_001040108 MLH3 0 . . . 1.08 84.22 46 8.18 Yes 33 1.14 Yes 0 0 No -29 0.58 No 45 45.29 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6034976 - NM_000535 PMS2 0 . . . 1.88 76.42 19 3.52 No 60 0.88 Yes 0 0 No -22 0.67 Yes 47 23.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75504251 - NM_001040108 MLH3 0 . . . 4.7 76.99 23 6.08 Yes 76 0.91 Yes 0 0 No -23 0.76 Yes 48 50.78 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68782639 + NM_133509 RAD51B 0 . . . 2.57 66.13 19 5.39 No 62 1.15 Yes 0 0 No -18 0.49 No 48 37.73 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr19 1204777 + NM_000455 STK11 0 . . . 3.01 0 33 4.8 No 33 0.46 No 0 0 No -32 0.73 Yes 41 81.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68316100 + NM_133509 RAD51B 0 . . . 1.64 66.46 24 6.55 Yes 16 1.15 Yes 0 0 No -30 0.54 No 42 88.64 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68886081 + NM_133509 RAD51B 0 . . . 6.58 88.29 25 5.2 No 66 0.5 No 0 0 No -56 0.12 No 48 60.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68479800 + NM_133509 RAD51B 0 . . . 2.34 0 23 5 No 61 -3.97 No 0 0 No -22 0.69 Yes 44 75.02 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190702152 + NM_000534 PMS1 0 . . . 3.57 83.95 51 7.14 Yes 47 0.82 Yes 0 0 No -24 0.89 Yes 51 80.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68310652 + NM_133509 RAD51B 0 . . . 2.93 0 32 5.74 Yes 61 0.99 Yes 0 0 No -31 0.53 No 23 82.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69128927 + NM_133509 RAD51B 0 . . . 6.11 80.09 21 7.21 Yes -3 0.86 Yes 0 0 No -20 0.82 Yes 43 86.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68583060 + NM_133509 RAD51B 0 . . . 2.46 72.86 45 4.82 No 76 0.76 No 0 0 No -34 0.61 No 43 60.68 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68598692 + NM_133509 RAD51B 0 . . . 1.84 84.53 15 4.48 No 16 1.12 Yes 0 0 No -40 0.53 No 42 67.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41025068 + NM_001164269 RAD51 0 . . . 4.79 84.37 23 3.63 No 11 1.35 Yes 0 0 No -57 0.74 Yes 47 94.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48008506 + NM_000179 MSH6 0 . . . 5.21 76.08 30 5.39 No 39 -3.12 No 0 0 No -32 0.67 Yes 46 76.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190657047 + NM_000534 PMS1 0 . . . 4.27 70.93 17 5.28 No 41 0.88 Yes 0 0 No -29 0.41 No 22 47.96 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47767277 + NM_000251 MSH2 0 . . . 5.62 83.16 14 4.22 No 3 0.83 Yes 0 0 No -17 0.33 No 51 62.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68472032 + NM_133509 RAD51B 0 . . . 2.98 68.34 39 6.21 Yes 21 1.31 Yes 0 0 No -22 0.43 No 42 88.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68669853 + NM_133509 RAD51B 0 . . . 6.36 85.55 23 7.35 Yes 56 1.48 Yes 0 0 No -23 0.69 Yes 45 45.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68859986 + NM_004360 CDH1 0 . . . 4.22 71.63 47 6.78 Yes 18 1.1 Yes 0 0 No -21 0.48 No 40 93.44 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47664012 + NM_000251 MSH2 0 . . . 8.04 84.04 15 4.96 No 35 -1.02 No 0 0 No -20 0.55 No 43 52.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59935078 - NM_032043 BRIP1 0 . . . 6.82 78.01 23 7.84 Yes 16 0.44 No 0 0 No -27 0.49 No 41 60.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108217694 + NM_000051 ATM 0 . . . 0.26 0 17 4.8 No 46 0.63 No 0 0 No -23 0.84 Yes 51 48.97 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68494395 + NM_133509 RAD51B 0 . . . 3.34 0 29 7.18 Yes 58 0.57 No 0 0 No -28 0.9 Yes 43 33.02 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68691064 + NM_133509 RAD51B 0 . . . 6.99 88.02 15 4.37 No 76 -3.41 No 0 0 No -15 0.16 No 47 59.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68419906 + NM_133509 RAD51B 0 . . . 0.27 68.49 30 5.83 Yes 7 1.35 Yes 0 0 No -49 0.42 No 51 64.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108099333 + NM_000051 ATM 0 . . . 4.56 73.76 30 5.39 No 27 0.86 Yes 0 0 No -29 0.78 Yes 31 57.38 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 52440163 - NM_004656 BAP1 0 . . . 7.73 80.15 16 5.19 No 12 0.77 Yes 0 0 No -27 0.49 No 46 92.88 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47726617 + NM_000251 MSH2 0 . . . 3.24 81.69 14 4.47 No 8 0.74 No 0 0 No -30 0.87 Yes 50 64.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215633823 - NM_000465 BARD1 0 . . . 1.69 74.68 19 4.71 No 10 0.49 No 0 0 No -27 0.3 No 48 53.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131945445 + NM_005732 RAD50 0 . . . 2.14 69.25 20 4.46 No 51 -4.53 No 0 0 No -19 0.67 Yes 50 63.91 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47800366 + NM_000251 MSH2 0 . . . 4.47 79.57 29 5.91 Yes 36 0.82 Yes 0 0 No -29 0.63 No 51 43.83 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32932815 + NM_000059 BRCA2 0 . . . 3.58 69.75 13 5.92 Yes -2 0.81 Yes 0 0 No -28 0.64 No 42 22.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190717942 + NM_000534 PMS1 0 . . . 0.93 70.93 31 8.46 Yes 51 0.07 No 0 0 No -30 0.96 Yes 48 62.61 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89711587 + NM_000314 PTEN 0 . . . 1.84 78.52 18 3.66 No 9 1.15 Yes 0 0 No -17 0.63 No 49 88.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68588263 + NM_133509 RAD51B 0 . . . 3.97 0 16 4.69 No 24 0.75 No 0 0 No -18 0.62 No 53 68.86 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75494487 - NM_001040108 MLH3 0 . . . 5.01 82.34 34 5.74 Yes 71 1.01 Yes 0 0 No -33 0.68 Yes 43 86.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190679943 + NM_000534 PMS1 0 . . . 8.91 80.41 32 6.16 Yes -1 0.67 No 0 0 No -31 0.89 Yes 42 76.14 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68682198 + NM_133509 RAD51B 0 . . . 6.35 76.39 17 4.66 No 30 0.5 No 0 0 No -25 0.27 No 42 82.08 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68793946 + NM_004360 CDH1 0 . . . 4.58 0 27 5.07 No 43 1.1 Yes 0 0 No -26 0.7 Yes 43 77.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69012194 + NM_133509 RAD51B 0 . . . 5.58 91.48 54 7.73 Yes 71 1.55 Yes 0 0 No -36 0.74 Yes 49 63.64 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215623252 - NM_000465 BARD1 0 . . . 2.06 0 23 5.39 No 18 0.42 No 0 0 No -22 0.86 Yes 30 38.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190680411 + NM_000534 PMS1 0 . . . 1.92 77.52 23 5.82 Yes 0 0.75 No 0 0 No -22 0.92 Yes 47 93.16 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152355875 - NM_005431 XRCC2 0 . . . 3.94 73.87 49 7.54 Yes 71 -5.61 No 0 0 No -31 0.48 No 48 46.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68801646 + NM_004360 CDH1 0 . . . 0.95 66.48 22 4.9 No 52 0.62 No 0 0 No -21 0.89 Yes 55 51.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89664639 + NM_000314 PTEN 0 . . . 2.01 69.5 18 4.8 No 38 1.12 Yes 0 0 No -34 0.61 No 39 75.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59895810 - NM_032043 BRIP1 0 . . . 1.73 70.47 13 6.73 Yes 21 0.56 No 0 0 No -25 0.57 No 37 47.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105176262 + NM_021930 RINT1 0 . . . 0.8 80.49 16 4.69 No 27 0.85 Yes 0 0 No -41 0.62 No 26 72.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108190785 + NM_000051 ATM 0 . . . 1.68 74.6 10 4.69 No 35 0.19 No 0 0 No -27 0.38 No 43 62.47 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75484685 - NM_001040108 MLH3 0 . . . 2.53 81.99 70 5.82 Yes 3 1.38 Yes 0 0 No -36 0.7 Yes 55 45.55 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 48035034 + NM_000179 MSH6 0 . . . 6.72 76.58 18 4.9 No 5 0.71 No 0 0 No -17 0.52 No 39 78.89 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108218898 + NM_000051 ATM 0 . . . 3.3 68.57 28 4.57 No 18 0.7 No 0 0 No -21 0.67 Yes 40 57.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190660672 + NM_000534 PMS1 0 . . . 3.16 74.22 16 4.9 No 30 0.59 No 0 0 No -22 0.67 Yes 41 41.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84400874 - NM_139076 FAM175A 0 . . . 4.44 67.95 24 6.16 Yes 50 1.27 Yes 0 0 No -23 0.58 No 45 87.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68308989 + NM_133509 RAD51B 0 . . . 1.1 0 39 7.51 Yes 40 1.08 Yes 0 0 No -38 0.78 Yes 52 51.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215612240 - NM_000465 BARD1 0 . . . 4.47 69.24 18 7 Yes 10 1.02 Yes 0 0 No -30 0.4 No 48 88.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68292112 + NM_133509 RAD51B 0 . . . 0.63 0 24 5.92 Yes 44 0.18 No 0 0 No -23 0.69 Yes 28 44.93 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68356922 + NM_133509 RAD51B 0 . . . 4.46 70.6 22 5.2 No 56 1.29 Yes 0 0 No -21 0.65 No 42 78.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47759626 + NM_000251 MSH2 0 . . . 2.83 0 23 4.9 No 10 0.85 Yes 0 0 No -22 0.74 Yes 43 81.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68795648 + NM_004360 CDH1 0 . . . 0.35 62.58 21 4.9 No 59 -4.43 No 0 0 No -25 0.53 No 20 45.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69037919 + NM_133509 RAD51B 0 . . . 1.58 80.36 13 4.9 No 63 -3.74 No 0 0 No -29 0.39 No 51 62.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68353262 + NM_133509 RAD51B 0 . . . 2.77 87.41 20 5.32 No 38 0.67 No 0 0 No -26 0.46 No 49 51.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1222174 + NM_000455 STK11 0 . . . 4.49 71.14 19 5.4 No NA NA NA 0 0 No -18 0.57 No 37 41.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59822105 - NM_032043 BRIP1 0 . . . 3.59 71.11 27 5.2 No 0 0.21 No 0 0 No -26 0.61 No 40 73.88 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89661294 + NM_000314 PTEN 0 . . . 5.78 74.5 28 4.76 No 61 1.05 Yes 0 0 No -27 0.44 No 49 48.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40991081 + NM_001164269 RAD51 0 . . . 2.4 63.74 22 5.37 No 30 -3.27 No 0 0 No -21 0.58 No 50 84.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68565387 + NM_133509 RAD51B 0 . . . 3.15 69.61 27 5.48 No 43 0.19 No 0 0 No -31 0.55 No 49 27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68808913 + NM_133509 RAD51B 0 . . . 9.45 89.85 27 4.29 No -4 -1.68 No 0 0 No -29 0.66 No 47 41.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41010111 + NM_001164269 RAD51 0 . . . 3.48 72.87 29 5.74 Yes 70 0.02 No 0 0 No -28 0.85 Yes 43 60.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37072691 + NM_000249 MLH1 0 . . . 3.52 66.41 22 3.51 No 41 0.25 No 0 0 No -21 0.79 Yes 53 54.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90949187 - NM_002485 NBN 0 . . . 2.95 0 27 5.43 No 68 1.34 Yes 0 0 No -29 0.36 No 47 45.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68934638 + NM_133509 RAD51B 0 . . . 0.31 0 20 4.6 No 5 0.31 No 0 0 No -24 0.59 No 47 57.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47775942 + NM_000251 MSH2 0 . . . 5.08 75.48 31 5.59 Yes 63 -3.6 No 0 0 No -30 0.82 Yes 42 76.13 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21980309 - NM_000077 CDKN2A 0 . . . 1.57 73.58 15 4.92 No 47 1.08 Yes 0 0 No -20 0.55 No 44 70.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21972793 - NM_000077 CDKN2A 0 . . . 4.55 71.17 30 5.52 No 75 0.99 Yes 0 0 No -29 0.77 Yes 27 72.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68784148 + NM_004360 CDH1 0 . . . 1.84 52.95 23 5.39 No 13 1.42 Yes 0 0 No -22 0.62 No 45 76.24 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89664610 + NM_000314 PTEN 0 . . . 3.66 81.44 22 5.29 No 9 1.1 Yes 0 0 No -21 0.64 No 49 74 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41016400 + NM_001164269 RAD51 0 . . . 3.54 88.54 18 4.49 No 51 0.79 Yes 0 0 No -17 0.63 No 41 43.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68467295 + NM_133509 RAD51B 0 . . . 6.44 72.71 32 6.92 Yes 60 0.9 Yes 0 0 No -27 0.64 No 42 74.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152351855 - NM_005431 XRCC2 0 . . . 0.91 65.11 14 5.29 No 75 0.66 No 0 0 No -49 0.37 No 41 60.35 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68571174 + NM_133509 RAD51B 0 . . . 0.8 68.01 12 4.9 No -4 0.16 No 0 0 No -24 0.34 No 43 55.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215622543 - NM_000465 BARD1 0 . . . 13.06 92.27 20 5.1 No 58 0.95 Yes 0 0 No -24 0.84 Yes 30 86.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94176451 - NM_005591 MRE11 0 . . . 5.22 71.95 21 3.83 No 12 1.1 Yes 0 0 No -25 0.56 No 46 92.07 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33432432 - NM_002878 RAD51D 0 . . . 2.6 77.5 19 5.06 No 67 0.54 No 0 0 No -22 0.57 No 45 78.82 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89633314 + NM_000314 PTEN 0 . . . 0.32 69.98 19 4.83 No 21 -1.77 No 0 0 No -24 0.74 Yes 53 59.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21985065 - NM_000077 CDKN2A 0 . . . 0.09 58.18 19 5 No 0 0.17 No 0 0 No -46 0.63 No 58 30.71 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68796275 + NM_133509 RAD51B 0 . . . 0.11 58.35 24 6.23 Yes 31 -2.82 No 0 0 No -23 0.88 Yes 36 22.7 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215652124 - NM_000465 BARD1 0 . . . 6.2 74.38 14 5.7 Yes 12 0.42 No 0 0 No -26 0.91 Yes 42 66.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68858296 + NM_004360 CDH1 0 . . . 2.51 76.62 22 4.58 No 69 -2.29 No 0 0 No -21 0.69 Yes 44 60.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47660120 + NM_000251 MSH2 0 . . . 1.9 80.36 48 8.77 Yes -3 0.3 No 0 0 No -22 0.39 No 61 29.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59791880 - NM_032043 BRIP1 0 . . . 2.21 74.44 44 7.07 Yes 65 -5.8 No 0 0 No -43 0.91 Yes 50 59.4 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40998492 + NM_001164269 RAD51 0 . . . 2.74 70.38 13 5.91 Yes 73 -4.88 No 0 0 No -30 0.5 No 15 45.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190731833 + NM_000534 PMS1 0 . . . 0.54 72.16 24 6.39 Yes 70 -5.2 No 0 0 No -23 0.71 Yes 28 29.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69099002 + NM_133509 RAD51B 0 . . . 8.25 87.69 18 5.74 Yes 1 2.02 Yes 0 0 No -29 0.42 No 44 46.55 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131910493 + NM_005732 RAD50 0 . . . 3.52 72.41 22 5.29 No 27 1.31 Yes 0 0 No -21 0.88 Yes 44 44.43 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108208063 + NM_000051 ATM 0 . . . 2.98 87.39 20 7.81 Yes 14 0.96 Yes 0 0 No -19 0.77 Yes 44 91.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89624802 + NM_000314 PTEN 0 . . . 2.72 0 14 3.22 No 19 0.96 Yes 0 0 No -22 0.66 No 35 44.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32901471 + NM_000059 BRCA2 0 . . . 0.07 74.23 16 6.81 Yes 53 0.64 No 0 0 No -29 0.87 Yes 50 83.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68652350 + NM_133509 RAD51B 0 . . . 5.91 92.75 33 5.51 No 55 -3.03 No 0 0 No -32 0.78 Yes 42 74.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68323896 + NM_133509 RAD51B 0 . . . 1.54 75.41 15 4.98 No 46 0.57 No 0 0 No -25 0.35 No 12 41.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69109476 + NM_133509 RAD51B 0 . . . 2.62 70.18 26 5.48 No 40 0.23 No 0 0 No -25 0.77 Yes 49 82.82 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94178289 - NM_005591 MRE11 0 . . . 6.13 82.2 44 7.03 Yes 8 0.22 No 0 0 No -28 0.6 No 50 86.01 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68495689 + NM_133509 RAD51B 0 . . . 4.44 83.66 29 6.32 Yes 23 1.65 Yes 0 0 No -28 0.88 Yes 35 79.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59803807 - NM_032043 BRIP1 0 . . . 5.66 78.96 16 5.38 No 72 -5.81 No 0 0 No -18 0.6 No 44 60.29 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68782725 + NM_133509 RAD51B 0 . . . 8.74 81.18 34 5.7 Yes 6 0.1 No 0 0 No -33 0.34 No 52 76 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68526782 + NM_133509 RAD51B 0 . . . 0.65 73.24 12 4.13 No 68 0.45 No 0 0 No -29 0.51 No 53 45.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68609933 + NM_133509 RAD51B 0 . . . 1.61 66.75 28 5.03 No 35 0.87 Yes 0 0 No -27 0.93 Yes 44 65.08 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68548213 + NM_133509 RAD51B 0 . . . 3.14 69.17 15 5.1 No 48 0.42 No 0 0 No -22 0.29 No 40 43.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94150587 - NM_005591 MRE11 0 . . . 6.33 85.5 47 5.8 Yes 11 0.85 Yes 0 0 No -24 0.54 No 47 90.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41210364 - NM_007294 BRCA1 0 . . . 4.74 87.6 23 4.8 No 2 1.26 Yes 0 0 No -22 0.78 Yes 45 45.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105189373 + NM_021930 RINT1 0 . . . 5.64 77.69 19 4.79 No 66 0.27 No 0 0 No -18 0.5 No 37 76.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94201624 - NM_005591 MRE11 0 . . . 2.22 54.63 24 4.67 No 72 -5.04 No 0 0 No -23 0.54 No 43 48.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215641274 - NM_000465 BARD1 0 . . . 8.97 83.88 46 6.45 Yes 27 1.56 Yes 0 0 No -36 0.56 No 40 41.91 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108233343 + NM_000051 ATM 0 . . . 1.2 67.82 31 5.57 Yes 28 -3.69 No 0 0 No -30 0.77 Yes 43 69.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68958562 + NM_133509 RAD51B 0 . . . 6.45 81.15 15 5.52 No 1 1.48 Yes 0 0 No -28 0.3 No 49 66.41 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90988067 - NM_002485 NBN 0 . . . 6.48 79.08 20 4.35 No 6 0.62 No 0 0 No -19 0.76 Yes 52 64.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108133919 + NM_000051 ATM 0 . . . 4.82 88.67 13 5.39 No 43 0.05 No 0 0 No -20 0.21 No 48 69.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47751640 + NM_000251 MSH2 0 . . . 2.72 67.9 27 5.74 Yes 76 -3.44 No 0 0 No -26 0.68 Yes 28 49.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105188495 + NM_021930 RINT1 0 . . . 6.78 83.21 20 5.57 Yes 9 0.87 Yes 0 0 No -24 0.7 Yes 49 89.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108185005 + NM_000051 ATM 0 . . . 4.57 78.9 15 4.84 No 52 0.68 No 0 0 No -26 0.25 No 48 84.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108198022 + NM_000051 ATM 0 . . . 5.39 83.24 42 4.49 No 10 0.7 No 0 0 No -16 0.56 No 48 63.82 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47708757 + NM_000251 MSH2 0 . . . 7.28 90.41 17 5.68 Yes 33 1.05 Yes 0 0 No -30 0.55 No 50 94.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41256864 - NM_007294 BRCA1 0 . . . 0.18 67.7 26 6.85 Yes 49 0.12 No 0 0 No -25 0.56 No 52 47.88 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94183824 - NM_005591 MRE11 0 . . . 8.66 80.75 9 3.87 No 18 0.6 No 0 0 No -21 0.49 No 46 79.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68472198 + NM_133509 RAD51B 0 . . . 1.31 74.16 15 4.58 No 18 -1.83 No 0 0 No -26 0.26 No 23 57.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90945618 - NM_002485 NBN 0 . . . 6.02 71.65 18 5.57 Yes 43 1.15 Yes 0 0 No -24 0.27 No 43 71.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21990249 - NM_000077 CDKN2A 0 . . . 3.81 64.86 22 4.2 No 25 0.82 Yes 0 0 No -21 0.88 Yes 33 84.78 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41023179 + NM_001164269 RAD51 0 . . . 5.71 68.2 19 4.52 No 0 0.44 No 0 0 No -18 0.93 Yes 51 62.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47734713 + NM_000251 MSH2 0 . . . 1.84 85.37 19 6.5 Yes 33 1.12 Yes 0 0 No -18 0.78 Yes 50 52.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190713893 + NM_000534 PMS1 0 . . . 6.61 78.7 34 5.81 Yes 57 1.55 Yes 0 0 No -24 0.41 No 47 89.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68952231 + NM_133509 RAD51B 0 . . . 9.79 81.3 13 4.87 No 46 0.4 No 0 0 No -30 0.3 No 46 73.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68581601 + NM_133509 RAD51B 0 . . . 0.4 73.55 18 4.79 No 21 0.58 No 0 0 No -44 0.79 Yes 50 28.39 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59806266 - NM_032043 BRIP1 0 . . . 6.49 72.86 24 6.98 Yes 67 0.94 Yes 0 0 No -23 0.84 Yes 46 52.21 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68326516 + NM_133509 RAD51B 0 . . . 0.32 54.36 57 7.4 Yes 34 0.39 No 0 0 No -41 0.91 Yes 45 64.05 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68990167 + NM_133509 RAD51B 0 . . . 1.98 73.76 43 5.18 No -3 0.12 No 0 0 No -27 0.55 No 47 91.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68372643 + NM_133509 RAD51B 0 . . . 4.56 70.93 23 6.05 Yes 2 0.18 No 0 0 No -22 0.77 Yes 38 75.15 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131964412 + NM_005732 RAD50 0 . . . 2.89 63.3 38 5.74 Yes 53 0.85 Yes 0 0 No -31 0.49 No 48 52.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69138666 + NM_133509 RAD51B 0 . . . 8.49 93.5 22 4.78 No 6 0.59 No 0 0 No -21 0.53 No 52 60.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190733061 + NM_000534 PMS1 0 . . . 4.47 74.01 21 5 No 42 0.92 Yes 0 0 No -20 0.77 Yes 41 43.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215613119 - NM_000465 BARD1 0 . . . 4.54 76.36 27 5.2 No 76 1.03 Yes 0 0 No -59 0.41 No 38 66.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69148709 + NM_133509 RAD51B 0 . . . 0.22 69.6 26 5.2 No 55 -4.42 No 0 0 No -20 0.78 Yes 49 44.26 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68813727 + NM_004360 CDH1 0 . . . 0.94 76.63 55 7.33 Yes 54 -3.95 No 0 0 No -24 0.43 No 53 50.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68695617 + NM_133509 RAD51B 0 . . . 1.7 0 30 6.41 Yes 27 0.1 No 0 0 No -29 0.81 Yes 49 81.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56805051 + NM_058216 RAD51C 0 . . . 2.83 68.92 26 5.39 No -1 0.46 No 0 0 No -25 0.6 No 31 62.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190739281 + NM_000534 PMS1 0 . . . 8.27 78.98 19 5 No 65 -3.8 No 0 0 No -26 0.67 Yes 41 57.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68319189 + NM_133509 RAD51B 0 . . . 5.46 74.91 24 5.99 Yes 22 -2.31 No 0 0 No -24 0.82 Yes 46 29.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68671292 + NM_133509 RAD51B 0 . . . 3.78 86.47 29 7.35 Yes 7 1.12 Yes 0 0 No -28 0.9 Yes 51 92.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37082028 + NM_000249 MLH1 0 . . . 0.59 0 17 6.93 Yes 32 0.45 No 0 0 No -27 0.44 No 35 62.43 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68823236 + NM_004360 CDH1 0 . . . 2.17 74.23 44 6.98 Yes 52 0.79 Yes 0 0 No -27 0.48 No 51 54.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190693368 + NM_000534 PMS1 0 . . . 3.33 66.22 31 5.68 Yes 71 0.48 No 0 0 No -31 0.7 Yes 46 56.71 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108229891 + NM_000051 ATM 0 . . . 0.52 71.68 25 5.97 Yes -3 0.22 No 0 0 No -24 0.72 Yes 47 63.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89670346 + NM_000314 PTEN 0 . . . 0.73 70.48 17 3.53 No 47 0.72 No 0 0 No -23 0.92 Yes 48 78.18 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68737756 + NM_133509 RAD51B 0 . . . 5.74 80.25 28 5.38 No 20 1.89 Yes 0 0 No -49 0.82 Yes 38 70.56 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47737743 + NM_000251 MSH2 0 . . . 0.74 71.44 40 7.63 Yes 24 0.64 No 0 0 No -27 0.59 No 51 73.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68778386 + NM_004360 CDH1 0 . . . 1.86 0 16 5.08 No 67 2.07 Yes 0 0 No -27 0.78 Yes 19 74.89 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68487201 + NM_133509 RAD51B 0 . . . 4.47 60.59 15 5.48 No 35 1.1 Yes 0 0 No -23 0.86 Yes 46 87.49 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59828369 - NM_032043 BRIP1 0 . . . 3.96 72.4 20 6.79 Yes 33 1.15 Yes 0 0 No -30 0.43 No 49 69.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90957324 - NM_002485 NBN 0 . . . 2.59 75.39 22 5.2 No 7 1.28 Yes 0 0 No -24 0.64 No 47 63.49 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69050391 + NM_133509 RAD51B 0 . . . 2.33 67.57 32 6.13 Yes 30 -3.37 No 0 0 No -31 0.96 Yes 47 62.18 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94157436 - NM_005591 MRE11 0 . . . 5.86 75.54 13 4.36 No 49 -1.49 No 0 0 No -21 0.57 No 48 43.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48014146 + NM_000179 MSH6 0 . . . 6.89 73.75 21 5.2 No 24 0.63 No 0 0 No -20 0.55 No 28 51.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108143110 + NM_000051 ATM 0 . . . 0.57 70.07 24 5 No 16 1.35 Yes 0 0 No -23 0.8 Yes 36 47.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190727894 + NM_000534 PMS1 0 . . . 6.47 81.34 14 5.62 Yes 17 1.34 Yes 0 0 No -14 0.47 No 41 88 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68295311 + NM_133509 RAD51B 0 . . . 3.07 0 12 5.07 No 41 0.55 No 0 0 No -16 0.3 No 14 55.22 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68838426 + NM_133509 RAD51B 0 . . . 0.33 64.52 22 4.8 No 28 0.38 No 0 0 No -24 0.62 No 45 32.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59761229 - NM_032043 BRIP1 0 . . . 2.5 72.23 18 4.9 No 36 0.46 No 0 0 No -22 0.65 No 43 85.54 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68835727 + NM_133509 RAD51B 0 . . . 8.18 79.55 29 4.94 No 35 0.06 No 0 0 No -28 0.74 Yes 38 53.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108162666 + NM_000051 ATM 0 . . . 3.03 75.58 24 4.8 No 36 0.92 Yes 0 0 No -21 0.57 No 33 89.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108155074 + NM_000051 ATM 0 . . . 2.17 74.3 19 5 No 6 1.44 Yes 0 0 No -18 0.46 No 52 95.52 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45795309 - NM_001048171 MUTYH 0 . . . 5.86 84.32 19 4.27 No 33 2.03 Yes 0 0 No -23 0.93 Yes 54 50.48 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68792110 + NM_133509 RAD51B 0 . . . 0.47 75.34 26 5.39 No 16 0.13 No 0 0 No -25 0.84 Yes 42 64.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131912882 + NM_005732 RAD50 0 . . . 6.73 78.44 31 4.33 No 45 0.54 No 0 0 No -14 0.38 No 50 44.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68703653 + NM_133509 RAD51B 0 . . . 1.02 76.3 34 5.46 No 5 1.11 Yes 0 0 No -23 0.66 No 47 77.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108211462 + NM_000051 ATM 0 . . . 4.14 77.74 22 6.9 Yes 51 0.86 Yes 0 0 No -60 0.52 No 41 93.5 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 40986657 + NM_001164269 RAD51 0 . . . 1.17 73.56 25 4.89 No 24 0.24 No 0 0 No -24 0.84 Yes 34 74.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94171855 - NM_005591 MRE11 0 . . . 9.75 88.22 21 5.04 No 17 0.94 Yes 0 0 No -20 0.46 No 41 78.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89638838 + NM_000314 PTEN 0 . . . 0.73 0 28 5.62 Yes 69 0.67 No 0 0 No -23 0.4 No 49 63.96 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29137134 - NM_001005735 CHEK2 0 . . . 3.97 84.41 23 4.89 No 27 1.25 Yes 0 0 No -22 0.66 No 34 65.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68314024 + NM_133509 RAD51B 0 . . . 7.5 82.89 24 5.39 No 16 0.94 Yes 0 0 No -22 0.53 No 42 93.81 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94176102 - NM_005591 MRE11 0 . . . 8.2 83.67 22 4.8 No 38 0.59 No 0 0 No -21 0.95 Yes 41 94.58 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68804141 + NM_133509 RAD51B 0 . . . 0.84 72.26 19 5 No 11 0.87 Yes 0 0 No -18 0.47 No 47 85.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69011097 + NM_133509 RAD51B 0 . . . 2.53 83.95 18 4.55 No 51 1.8 Yes 0 0 No -34 0.82 Yes 25 72.5 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215591845 - NM_000465 BARD1 0 . . . 3.47 77.77 20 5.98 Yes 45 1.63 Yes 0 0 No -20 0.41 No 44 49.05 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94211402 - NM_005591 MRE11 0 . . . 5.22 83.53 23 7.35 Yes 10 0.94 Yes 0 0 No -22 0.9 Yes 48 89.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59842652 - NM_032043 BRIP1 0 . . . 4.99 74.7 17 3.38 No -3 0.2 No 0 0 No -20 0.59 No 41 87.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68389379 + NM_133509 RAD51B 0 . . . 1.62 69.51 24 5.77 Yes 17 0.06 No 0 0 No -27 0.44 No 41 67.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68412668 + NM_133509 RAD51B 0 . . . 1.48 64.02 14 5.06 No 71 -5.6 No 0 0 No -19 0.52 No 53 29.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68510823 + NM_133509 RAD51B 0 . . . 3.47 76.35 17 4.68 No -2 0.53 No 0 0 No -47 0.32 No 42 88.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41247902 - NM_007294 BRCA1 0 . . . 2.7 73.58 21 5.6 Yes 65 0.71 No 21 0.81 Yes -20 0.8 Yes 43 56.8 No BPP: Yes, SVM: No, Branch: , LB: Yes, RNABPS: No chr11 94161140 - NM_005591 MRE11 0 . . . 2.06 77.5 13 5.57 Yes 42 1.03 Yes 0 0 No -27 0.51 No 16 29.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32948656 + NM_000059 BRCA2 0 . . . 7.92 92.93 43 7 Yes 54 1 Yes 0 0 No -42 0.5 No 53 81.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89685198 + NM_000314 PTEN 0 . . . 6.8 82.99 29 5.46 No 26 -1.74 No 0 0 No -44 0.62 No 35 19.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47730639 + NM_000251 MSH2 0 . . . 1.84 68.29 40 6.24 Yes 65 -6.23 No 0 0 No -39 0.47 No 48 40.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105176080 + NM_021930 RINT1 0 . . . 1.74 76.09 27 4.73 No 53 -1.82 No 0 0 No -26 0.64 No 47 59.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59898518 - NM_032043 BRIP1 0 . . . 3.43 0 43 5.57 Yes 70 1.42 Yes 0 0 No -43 0.37 No 52 83.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68535154 + NM_133509 RAD51B 0 . . . 1.27 0 38 4.43 No 7 1.36 Yes 0 0 No -33 0.84 Yes 51 73.06 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108209579 + NM_000051 ATM 0 . . . 0.45 62.17 29 7.68 Yes 48 1.14 Yes 0 0 No -28 0.86 Yes 40 67.24 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89645529 + NM_000314 PTEN 0 . . . 5.91 72.03 36 10.52 Yes 55 1.45 Yes 0 0 No -35 0.83 Yes 30 81.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32944192 + NM_000059 BRCA2 0 . . . 7.85 79.28 27 5.41 No 13 1.36 Yes 0 0 No -26 0.58 No 45 78.87 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69112198 + NM_133509 RAD51B 0 . . . 2.44 70.23 12 4.41 No 41 -3.57 No 0 0 No -19 0.42 No 39 58.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94190457 - NM_005591 MRE11 0 . . . 5.62 74.75 23 6.31 Yes 54 2.5 Yes 0 0 No -22 0.38 No 46 87.07 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94193950 - NM_005591 MRE11 0 . . . 7.94 81.92 22 5.29 No 2 0.37 No 0 0 No -21 0.67 Yes 46 82.5 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23652242 - NM_024675 PALB2 0 . . . 3.24 65.34 19 5.62 Yes 71 1.86 Yes 0 0 No -24 0.75 Yes 52 90.56 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108120621 + NM_000051 ATM 0 . . . 8.62 82.64 13 5.57 Yes 40 0.51 No 0 0 No -24 0.47 No 46 60.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108150837 + NM_000051 ATM 0 . . . 4.16 79.09 26 5.51 No 48 0.92 Yes 0 0 No -25 0.85 Yes 38 65.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69013899 + NM_133509 RAD51B 0 . . . 0.24 0 29 5.92 Yes 42 0.96 Yes 0 0 No -29 0.61 No 16 44.31 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75488238 - NM_001040108 MLH3 0 . . . 2.29 81.23 30 5.36 No 34 0.72 No 0 0 No -29 0.68 Yes 36 51.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68762402 + NM_133509 RAD51B 0 . . . 5.4 82.18 24 5.48 No 13 0.49 No 0 0 No -23 0.65 No 45 73.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41237324 - NM_007294 BRCA1 0 . . . 2.06 68.25 18 4.9 No 69 1.16 Yes 0 0 No -17 0.36 No 18 32.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105210103 + NM_021930 RINT1 0 . . . 3.6 71.49 23 5.12 No 34 -3.89 No 0 0 No -48 0.7 Yes 50 83.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152353475 - NM_005431 XRCC2 0 . . . 0.28 0 22 4.8 No 7 0.82 Yes 0 0 No -21 0.97 Yes 39 70.39 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29093493 - NM_001005735 CHEK2 0 . . . 7.13 80.98 31 5.04 No 8 0.33 No 0 0 No -34 0.55 No 50 84.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90952451 - NM_002485 NBN 0 . . . 3.09 66.81 26 5.66 Yes 62 -4.96 No 0 0 No -25 0.84 Yes 48 76.02 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68847969 + NM_133509 RAD51B 0 . . . 6.46 88.34 41 5 No 18 1.33 Yes 0 0 No -40 0.5 No 40 86.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68894429 + NM_133509 RAD51B 0 . . . 6.07 67.08 26 5.28 No 45 1.07 Yes 0 0 No -25 0.91 Yes 53 54.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68863463 + NM_133509 RAD51B 0 . . . 6.3 78.76 12 4.11 No 4 0.11 No 0 0 No -57 0.62 No 47 61.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108171459 + NM_000051 ATM 0 . . . 1.06 68.88 13 7.41 Yes -1 -2.27 No 0 0 No -28 0.64 No 26 72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47703929 + NM_000251 MSH2 0 . . . 3.11 75.76 32 6.63 Yes 14 0.34 No 0 0 No -31 0.73 Yes 44 73.68 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41005825 + NM_001164269 RAD51 0 . . . 5.52 88.76 34 7.67 Yes 38 1.46 Yes 0 0 No -33 0.79 Yes 46 68.69 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68666900 + NM_133509 RAD51B 0 . . . 1.27 75.33 25 5.1 No 0 1.21 Yes 0 0 No -24 0.87 Yes 49 35.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84388247 - NM_139076 FAM175A 0 . . . 0.74 0 43 7.15 Yes 49 -1.4 No 0 0 No -28 0.43 No 33 61.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108235076 + NM_000051 ATM 0 . . . 4.51 76.75 15 5.39 No 28 1.19 Yes 0 0 No -28 0.27 No 46 48.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59837456 - NM_032043 BRIP1 0 . . . 1.82 69.22 19 4.59 No 16 0.77 No 0 0 No -38 0.64 No 42 97.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68828220 + NM_004360 CDH1 0 . . . 2.72 83.47 18 4.8 No 45 -0.19 No 0 0 No -42 0.47 No 31 57.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69027793 + NM_133509 RAD51B 0 . . . 2.83 70.55 61 8.42 Yes 19 -1.43 No 0 0 No -60 0.36 No 43 84.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37039449 + NM_000249 MLH1 0 . . . 0.1 74.68 31 5.72 Yes 64 1.1 Yes 0 0 No -30 0.4 No 36 37.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89624157 + NM_000314 PTEN 0 . . . 6.41 89.2 22 5.01 No 71 -3.25 No 0 0 No -26 0.61 No 51 58.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131932128 + NM_005732 RAD50 0 . . . 2.87 81.09 36 5.7 Yes 10 1 Yes 0 0 No -25 0.57 No 48 89.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69104255 + NM_133509 RAD51B 0 . . . 5.63 73.54 45 7.38 Yes 65 -4.04 No 0 0 No -22 0.66 Yes 41 70.56 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215674319 - NM_000465 BARD1 0 . . . 4.65 74.57 22 5.72 Yes NA NA NA 0 0 No -21 0.72 Yes 23 48.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68860457 + NM_004360 CDH1 0 . . . 1.61 74.89 23 5.39 No 44 -2.64 No 0 0 No -22 0.57 No 14 69.41 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215614636 - NM_000465 BARD1 0 . . . 3.22 67.78 11 5.29 No 67 0.12 No 0 0 No -21 0.33 No 48 74.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105192582 + NM_021930 RINT1 0 . . . 5.81 76.88 31 5.92 Yes 11 0.34 No 0 0 No -30 0.52 No 37 70.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68664181 + NM_133509 RAD51B 0 . . . 6.78 84.11 34 6.53 Yes 39 0.73 No 0 0 No -38 0.39 No 48 59.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59853032 - NM_032043 BRIP1 0 . . . 3.3 74.72 23 6.07 Yes 36 1.01 Yes 0 0 No -23 0.77 Yes 46 65.59 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32965888 + NM_000059 BRCA2 0 . . . 8.9 80.99 17 5.29 No 18 0.47 No 0 0 No -21 0.61 No 34 65.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68813681 + NM_133509 RAD51B 0 . . . 6.41 77.36 13 4.8 No 28 0.91 Yes 0 0 No -16 0.41 No 34 79.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69020360 + NM_133509 RAD51B 0 . . . 5.47 72.18 17 5.75 Yes 47 0.25 No 0 0 No -34 0.75 Yes 54 59.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21971937 - NM_000077 CDKN2A 0 . . . 1.68 83.28 24 4.9 No 3 0.62 No 0 0 No -23 0.79 Yes 49 53.22 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47728537 + NM_000251 MSH2 0 . . . 8.28 80.63 33 5.58 Yes 56 0.82 Yes 0 0 No -32 0.37 No 46 87.12 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59839380 - NM_032043 BRIP1 0 . . . 5.99 77.8 29 4.77 No 36 0.52 No 0 0 No -26 0.85 Yes 38 59.9 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59876681 - NM_032043 BRIP1 0 . . . 1.9 65.37 14 4.9 No 15 0.63 No 25 0.9 Yes -47 0.63 No 43 63.78 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr14 68443826 + NM_133509 RAD51B 0 . . . 2.8 69.46 48 6.91 Yes -4 0.76 No 0 0 No -28 0.36 No 39 84.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90981829 - NM_002485 NBN 0 . . . 3.01 67.62 39 6.7 Yes 41 0.01 No 0 0 No -31 0.59 No 50 82.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 7591304 - NM_000546 TP53 0 . . . 2.4 64.35 17 6.93 Yes 8 0.94 Yes 0 0 No -27 0.58 No 41 94.17 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59854439 - NM_032043 BRIP1 0 . . . 4.37 75.15 23 4.49 No 54 0.84 Yes 0 0 No -34 0.7 Yes 25 93.76 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 40991753 + NM_001164269 RAD51 0 . . . 4.64 69.56 27 5.47 No 52 0.54 No 0 0 No -26 0.37 No 34 48.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23617719 - NM_024675 PALB2 0 . . . 4.68 85.74 22 5.11 No 0 1.32 Yes 0 0 No -49 0.48 No 51 67.35 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68419318 + NM_133509 RAD51B 0 . . . 3.65 83.75 16 5.57 Yes 75 1.16 Yes 0 0 No -28 0.61 No 54 83.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68672755 + NM_133509 RAD51B 0 . . . 1.45 71.97 28 5.82 Yes 74 -1.61 No 0 0 No -28 0.68 Yes 52 52.89 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94188564 - NM_005591 MRE11 0 . . . 5.09 66.88 40 6.54 Yes 36 0.6 No 0 0 No -30 0.53 No 35 70.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68802225 + NM_133509 RAD51B 0 . . . 5.72 79.79 27 5.48 No 16 1.14 Yes 0 0 No -26 0.6 No 42 77.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68438379 + NM_133509 RAD51B 0 . . . 7.35 82.59 24 6.12 Yes 43 -2.03 No 0 0 No -23 0.73 Yes 49 59.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68579865 + NM_133509 RAD51B 0 . . . 9.71 92.64 19 4.9 No 32 0.62 No 0 0 No -25 0.53 No 42 87.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59833458 - NM_032043 BRIP1 0 . . . 0.47 59.2 17 5.47 No 47 0.47 No 0 0 No -28 0.52 No 45 50.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131969900 + NM_005732 RAD50 0 . . . 4 70.66 20 5.02 No 18 0.49 No 0 0 No -19 0.25 No 40 57.74 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89692331 + NM_000314 PTEN 0 . . . 2.03 0 14 4.9 No 40 0.63 No 0 0 No -19 0.36 No 50 58.63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56798696 + NM_058216 RAD51C 0 . . . 7.05 91.35 12 4.8 No 54 -0.79 No 0 0 No -24 0.92 Yes 52 73.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 105204627 + NM_021930 RINT1 0 . . . 4.22 69.43 22 5.68 Yes 7 0.52 No 0 0 No -26 0.48 No 51 93.14 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32972477 + NM_000059 BRCA2 0 . . . 2.74 73.37 21 6.85 Yes 66 -4.53 No 0 0 No -20 0.33 No 49 31.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6040791 - NM_000535 PMS2 0 . . . 3.93 86.71 32 4.07 No 57 -3.07 No 0 0 No -25 0.31 No 44 65.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215671205 - NM_000465 BARD1 0 . . . 1.9 73.31 22 5.29 No 71 0.42 No 0 0 No -26 0.72 Yes 52 34.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68932914 + NM_133509 RAD51B 0 . . . 3.95 87.55 32 5.74 Yes 11 0.32 No 0 0 No -31 0.91 Yes 47 92.48 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68741765 + NM_133509 RAD51B 0 . . . 0.81 66.9 27 6.31 Yes 8 1.51 Yes 0 0 No -27 0.8 Yes 44 77.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131938395 + NM_005732 RAD50 0 . . . 1.99 73.83 23 5.32 No 50 1.3 Yes 0 0 No -44 0.78 Yes 29 66.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1211335 + NM_000455 STK11 0 . . . 2.12 81.42 17 5.29 No 39 -2 No 0 0 No -21 0.54 No 52 45.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152362357 - NM_005431 XRCC2 0 . . . 2.79 71.77 24 6.08 Yes 45 -4.9 No 0 0 No -23 0.89 Yes 49 72.2 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94187224 - NM_005591 MRE11 0 . . . 5.7 83.42 32 6.05 Yes 42 0.03 No 0 0 No -31 0.6 No 36 79.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68963894 + NM_133509 RAD51B 0 . . . 1.26 75.29 26 4.75 No 63 1.59 Yes 0 0 No -10 0.6 No 43 42.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59921253 - NM_032043 BRIP1 0 . . . 8 79.59 41 6.38 Yes 59 0.43 No 0 0 No -40 0.76 Yes 43 73.95 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37064569 + NM_000249 MLH1 0 . . . 1.68 68.97 40 6.08 Yes 60 1.73 Yes 0 0 No -39 0.71 Yes 36 72.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68865857 + NM_133509 RAD51B 0 . . . 3.06 75.38 24 5.2 No 24 0.27 No 0 0 No -23 0.89 Yes 48 65.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41194835 - NM_007294 BRCA1 0 . . . 5.82 89.95 27 4.39 No 50 2.1 Yes 0 0 No -27 0.75 Yes 50 53.98 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68760244 + NM_133509 RAD51B 0 . . . 3.9 71.52 57 7.94 Yes 36 0.86 Yes 0 0 No -56 0.4 No 19 62.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68439813 + NM_133509 RAD51B 0 . . . 2.02 73.68 22 5.74 Yes 50 -4.58 No 0 0 No -21 0.82 Yes 44 66.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45793757 - NM_001048171 MUTYH 0 . . . 4.96 82.25 21 5 No 21 0.38 No 0 0 No -20 0.87 Yes 41 53.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59850013 - NM_032043 BRIP1 0 . . . 1.87 80.12 39 6.02 Yes 6 1.13 Yes 0 0 No -38 0.61 No 52 70.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59901070 - NM_032043 BRIP1 0 . . . 5.45 76.14 16 4.46 No 14 0.78 Yes 0 0 No -23 0.46 No 40 83.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69136676 + NM_133509 RAD51B 0 . . . 3.76 68.38 55 7.54 Yes 14 0.86 Yes 0 0 No -22 0.8 Yes 38 82.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89684075 + NM_000314 PTEN 0 . . . 1.25 62.97 43 7.68 Yes 15 0.14 No 0 0 No -33 0.42 No 43 50.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131890765 + NM_005732 RAD50 0 . . . 6.92 80.64 20 4.45 No -4 0.44 No 0 0 No -33 0.84 Yes 39 44.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68510746 + NM_133509 RAD51B 0 . . . 4.42 89.11 28 5.29 No 51 0.54 No 0 0 No -27 0.62 No 40 80.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32970015 + NM_000059 BRCA2 0 . . . 3.16 0 20 4.74 No 18 1.24 Yes 0 0 No -23 0.64 No 40 64.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6036818 - NM_000535 PMS2 0 . . . 3.87 88.55 31 7.21 Yes 44 1.49 Yes 0 0 No -30 0.71 Yes 14 95.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69036533 + NM_133509 RAD51B 0 . . . 3.57 74.49 18 4.58 No 35 0.74 No 0 0 No -17 0.28 No 42 83.62 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215623014 - NM_000465 BARD1 0 . . . 1.73 63.61 22 5.01 No 27 0.67 No 0 0 No -29 0.28 No 39 46.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94159254 - NM_005591 MRE11 0 . . . 6.09 73.88 37 7.21 Yes 59 0.82 Yes 0 0 No -37 0.88 Yes 44 70.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108148190 + NM_000051 ATM 0 . . . 0.14 64.99 36 5.04 No 13 0.63 No 0 0 No -35 0.78 Yes 45 88.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190736846 + NM_000534 PMS1 0 . . . 2.53 70.56 19 3.91 No 47 1.05 Yes 0 0 No -18 0.83 Yes 43 90.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69133806 + NM_133509 RAD51B 0 . . . 6.44 70.76 30 5.9 Yes 13 1.38 Yes 0 0 No -29 0.49 No 45 64.24 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190697948 + NM_000534 PMS1 0 . . . 2.42 64.41 17 6.93 Yes 23 1.77 Yes 0 0 No -27 0.38 No 53 38.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108233833 + NM_000051 ATM 0 . . . 4.55 76.17 25 5.57 Yes 63 1.36 Yes 0 0 No -24 0.88 Yes 42 84.61 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68894457 + NM_133509 RAD51B 0 . . . 2.29 73.76 26 5.36 No 73 1.07 Yes 0 0 No -25 0.73 Yes 47 43.97 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68352829 + NM_133509 RAD51B 0 . . . 2.46 0 19 4.9 No -2 1.3 Yes 0 0 No -17 0.53 No 50 73.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7563668 - NM_000546 TP53 0 . . . 5.05 73.44 21 5 No 52 0.04 No 0 0 No -21 0.49 No 48 76.13 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215661423 - NM_000465 BARD1 0 . . . 2.22 0 34 6.32 Yes 58 0.03 No 0 0 No -29 0.91 Yes 54 91.41 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47791869 + NM_000251 MSH2 0 . . . 5.27 69.53 39 6.56 Yes 34 1.22 Yes 0 0 No -38 0.45 No 40 80.6 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108176285 + NM_000051 ATM 0 . . . 3.14 79.6 27 4.87 No 65 -4.31 No 0 0 No -22 0.71 Yes 40 53.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69076819 + NM_133509 RAD51B 0 . . . 6.22 75.6 23 4.17 No 58 0.65 No 0 0 No -22 0.5 No 38 41.15 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59869689 - NM_032043 BRIP1 0 . . . 5.25 71.49 20 5.1 No 21 0.72 No 0 0 No -39 0.75 Yes 37 81.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47759525 + NM_000251 MSH2 0 . . . 0.26 0 49 4.81 No 50 1.31 Yes 0 0 No -24 0.44 No 24 65.94 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68612265 + NM_133509 RAD51B 0 . . . 6.23 86.58 13 5.66 Yes 66 -4.64 No 0 0 No -23 0.84 Yes 39 60.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52440846 - NM_004656 BAP1 0 . . . 7.83 86.43 21 3.71 No 19 -0.99 No 0 0 No -20 0.64 No 42 60.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68939246 + NM_133509 RAD51B 0 . . . 9.86 89.25 31 6.64 Yes 2 0.63 No 0 0 No -30 0.75 Yes 40 57.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104182605 - NM_001100119 XRCC3 0 . . . 0.16 62.67 21 4.65 No NA NA NA 0 0 No -20 0.83 Yes 31 15.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23651897 - NM_024675 PALB2 0 . . . 3.73 0 32 5.39 No 63 0.3 No 0 0 No -27 0.74 Yes 40 72.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23634655 - NM_024675 PALB2 0 . . . 1.55 74.02 16 5.46 No 66 1.06 Yes 0 0 No -30 0.83 Yes 36 55.3 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68814904 + NM_133509 RAD51B 0 . . . 2.48 71.63 24 5.36 No 7 0.97 Yes 0 0 No -19 0.64 No 41 53.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131930585 + NM_005732 RAD50 0 . . . 0.77 80.62 21 4.93 No 59 1.06 Yes 0 0 No -20 0.48 No 14 49.26 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32955817 + NM_000059 BRCA2 0 . . . 3.11 82.59 25 5.23 No 72 -3.22 No 0 0 No -25 0.72 Yes 47 79.25 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131972405 + NM_005732 RAD50 0 . . . 7.56 81.58 31 5.83 Yes 30 2.11 Yes 0 0 No -36 0.54 No 28 76.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56809685 + NM_058216 RAD51C 0 . . . 2.06 68.69 29 5.72 Yes 71 0.31 No 30 0.3 Yes -32 0.46 No 33 65.56 No BPP: Yes, SVM: No, Branch: , LB: No, RNABPS: No chr17 59835115 - NM_032043 BRIP1 0 . . . 3.49 70.85 33 5.74 Yes 23 0.65 No 0 0 No -32 0.48 No 40 93.53 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105189897 + NM_021930 RINT1 0 . . . 4.74 70.15 17 4 No 16 1.17 Yes 0 0 No -29 0.67 Yes 42 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59870801 - NM_032043 BRIP1 0 . . . 1.79 68.51 17 6.24 Yes 58 0.26 No 0 0 No -16 0.48 No 36 32.49 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68515742 + NM_133509 RAD51B 0 . . . 1.3 67.82 36 6.08 Yes 40 -2.8 No 0 0 No -35 0.83 Yes 49 47.34 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69135521 + NM_133509 RAD51B 0 . . . 1.61 75.78 29 4.94 No 47 1.4 Yes 0 0 No -28 0.39 No 45 45.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89730587 + NM_000314 PTEN 0 . . . 2.98 0 22 5.29 No 51 1.01 Yes 0 0 No -21 0.89 Yes 32 50.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90960508 - NM_002485 NBN 0 . . . 5.66 83.77 15 4.46 No 4 0.75 No 0 0 No -27 0.32 No 51 71.7 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr1 45795873 - NM_001048171 MUTYH 0 . . . 0.14 0 17 5.62 Yes 5 1.38 Yes 0 0 No -16 0.5 No 13 59.3 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190706612 + NM_000534 PMS1 0 . . . 1.93 67.73 27 5.21 No 13 0.53 No 0 0 No -26 0.54 No 40 68.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89727667 + NM_000314 PTEN 0 . . . 8.44 88.43 22 6.56 Yes 0 0.78 Yes 0 0 No -21 0.81 Yes 45 58.76 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68549360 + NM_133509 RAD51B 0 . . . 2.46 72.55 18 5.34 No 58 1.15 Yes 0 0 No -17 0.66 No 38 63.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68673032 + NM_133509 RAD51B 0 . . . 8.64 88.17 29 5.79 Yes 5 1.24 Yes 0 0 No -28 0.62 No 45 48.22 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6017725 - NM_000535 PMS2 0 . . . 3.89 84.17 18 4.9 No 30 1.11 Yes 0 0 No -25 0.43 No 20 72.91 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47665672 + NM_000251 MSH2 0 . . . 3.31 66.35 37 6.93 Yes 55 0.8 Yes 0 0 No -36 0.95 Yes 40 75.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47659688 + NM_000251 MSH2 0 . . . 2.55 0 80 8.55 Yes 57 -2.59 No 0 0 No -25 0.38 No 43 53.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94195928 - NM_005591 MRE11 0 . . . 0.49 75.98 37 7.82 Yes 31 0.74 No 0 0 No -34 0.45 No 46 55.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68793935 + NM_133509 RAD51B 0 . . . 4.09 79.24 23 4.84 No 45 0.42 No 0 0 No -22 0.91 Yes 44 66.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68599972 + NM_133509 RAD51B 0 . . . 6.68 78.76 29 5.74 Yes 36 0.15 No 0 0 No -28 0.94 Yes 47 61.15 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68939648 + NM_133509 RAD51B 0 . . . 4.91 73.67 30 5.38 No 48 1.27 Yes 0 0 No -29 0.5 No 51 73.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131981569 + NM_005732 RAD50 0 . . . 4.46 82.48 22 4.21 No 61 -3.42 No 0 0 No -25 0.57 No 51 88.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69121945 + NM_133509 RAD51B 0 . . . 11.93 90.6 54 7.48 Yes 16 1.5 Yes 0 0 No -53 0.8 Yes 42 93.65 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr4 84387112 - NM_139076 FAM175A 0 . . . 5.98 84.03 22 4.9 No 9 0.21 No 0 0 No -21 0.61 No 48 53.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41204776 - NM_007294 BRCA1 0 . . . 6.78 78.75 25 5.42 No 64 0.55 No 0 0 No -24 0.58 No 38 23.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68794659 + NM_133509 RAD51B 0 . . . 5.88 81.85 28 5.48 No 15 1.51 Yes 0 0 No -25 0.75 Yes 43 65.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190661060 + NM_000534 PMS1 0 . . . 5.85 73.07 23 4.18 No 20 0.57 No 0 0 No -22 0.67 Yes 48 74.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68880651 + NM_133509 RAD51B 0 . . . 9.93 92.08 48 6.86 Yes 13 0.22 No 0 0 No -37 0.54 No 47 67.57 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68677811 + NM_133509 RAD51B 0 . . . 3.78 81.56 12 5.11 No 2 0.98 Yes 0 0 No -25 0.69 Yes 33 89.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68856356 + NM_133509 RAD51B 0 . . . 5.06 77.64 20 5.57 Yes 58 1.36 Yes 0 0 No -28 0.6 No 36 60.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68752696 + NM_133509 RAD51B 0 . . . 3.56 82.95 27 5.39 No 52 1.07 Yes 0 0 No -55 0.53 No 40 73.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215667925 - NM_000465 BARD1 0 . . . 6.54 80.78 71 8.3 Yes 66 0.14 No 0 0 No -24 0.42 No 50 40.42 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr1 45795545 - NM_001048171 MUTYH 0 . . . 4.12 74.63 12 4.49 No 1 1.19 Yes 0 0 No -26 0.42 No 49 72.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7591501 - NM_000546 TP53 0 . . . 8.69 79.95 11 4.12 No 27 0.25 No 0 0 No -29 0.38 No 37 46.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68422876 + NM_133509 RAD51B 0 . . . 3.26 76.26 54 5.21 No 48 -3.07 No 0 0 No -33 0.68 Yes 48 50.79 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89683456 + NM_000314 PTEN 0 . . . 5.8 87.15 28 5.52 No 5 1.22 Yes 0 0 No -27 0.35 No 40 84.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190718262 + NM_000534 PMS1 0 . . . 4.58 84.41 23 4.81 No 28 1.54 Yes 0 0 No -22 0.6 No 30 54.36 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68869674 + NM_133509 RAD51B 0 . . . 3.62 64.56 20 4.9 No 63 1.32 Yes 0 0 No -19 0.37 No 35 79.36 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68763534 + NM_133509 RAD51B 0 . . . 4.28 81.71 33 5.34 No 74 -4.47 No 0 0 No -24 0.84 Yes 46 55.59 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68539750 + NM_133509 RAD51B 0 . . . 1.34 0 33 5.29 No 55 -2.79 No 0 0 No -32 0.67 Yes 36 68.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59872422 - NM_032043 BRIP1 0 . . . 5.78 71.01 18 5.57 Yes 26 0.06 No 0 0 No -26 0.46 No 32 43.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68605741 + NM_133509 RAD51B 0 . . . 1.12 70.32 34 4.14 No 54 -2 No 0 0 No -33 0.72 Yes 42 63.74 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29096824 - NM_001005735 CHEK2 0 . . . 3.96 81.37 22 7.28 Yes 58 -3.88 No 0 0 No -21 0.67 Yes 43 49.26 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32921008 + NM_000059 BRCA2 0 . . . 6.94 82.59 28 5.38 No 45 0.56 No 0 0 No -27 0.45 No 51 81.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 104183410 - NM_001100119 XRCC3 0 . . . 6.13 83.86 35 6.78 Yes 0 2.07 Yes 0 0 No -29 0.6 No 18 58.35 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56791759 + NM_058216 RAD51C 0 . . . 4.88 84.42 42 5.32 No 51 0.33 No 0 0 No -31 0.49 No 53 59.51 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68792967 + NM_133509 RAD51B 0 . . . 1.86 80.34 10 5.29 No 32 1.25 Yes 0 0 No -30 0.49 No 40 59.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68342692 + NM_133509 RAD51B 0 . . . 0.94 0 24 3.55 No 6 0.59 No 0 0 No -26 0.54 No 40 38.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47628849 + NM_000251 MSH2 0 . . . 9.13 86.2 11 3.67 No 9 2.02 Yes 0 0 No -18 0.41 No 49 94.89 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59907087 - NM_032043 BRIP1 0 . . . 2.43 62.16 27 4.53 No 28 1.73 Yes 0 0 No -26 0.8 Yes 41 20.45 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108122758 + NM_000051 ATM 0 . . . 8.74 88.89 31 6.71 Yes 62 0.48 No 0 0 No -30 0.72 Yes 44 77.88 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr22 29132635 - NM_001005735 CHEK2 0 . . . 0.97 75.41 21 5.83 Yes 65 0.48 No 0 0 No -21 0.45 No 51 85.23 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69089110 + NM_133509 RAD51B 0 . . . 7.43 75.06 28 5.64 Yes 31 1.57 Yes 0 0 No -21 0.37 No 45 74.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89664719 + NM_000314 PTEN 0 . . . 5.63 87.27 21 4.6 No 33 1.22 Yes 0 0 No -45 0.34 No 18 74.09 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56784267 + NM_058216 RAD51C 0 . . . 10.1 81.31 22 6.25 Yes 14 0.57 No 0 0 No -25 0.52 No 44 80.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59862521 - NM_032043 BRIP1 0 . . . 0.13 72.46 26 4.69 No 48 0.36 No 0 0 No -25 0.78 Yes 59 39.78 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108137541 + NM_000051 ATM 0 . . . 2.3 84.41 26 5.66 Yes 15 0.75 No 0 0 No -25 0.73 Yes 44 40.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68354619 + NM_133509 RAD51B 0 . . . 0.18 0 31 5.34 No 16 0.61 No 0 0 No -25 0.87 Yes 42 70.44 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47676919 + NM_000251 MSH2 0 . . . 6.45 76.95 20 4.69 No 13 0.53 No 0 0 No -19 0.88 Yes 38 46.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59931391 - NM_032043 BRIP1 0 . . . 4.17 68.93 33 5.88 Yes 13 0.85 Yes 0 0 No -32 0.52 No 40 86.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68538178 + NM_133509 RAD51B 0 . . . 2.54 0 17 4.68 No 7 0.66 No 0 0 No -19 0.27 No 51 81.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68416250 + NM_133509 RAD51B 0 . . . 1.74 73.82 16 4.5 No 42 0.87 Yes 0 0 No -16 0.17 No 16 72.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68405386 + NM_133509 RAD51B 0 . . . 2.25 77.53 18 4.68 No 34 0.86 Yes 0 0 No -35 0.55 No 51 47.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68975584 + NM_133509 RAD51B 0 . . . 1.46 81.08 13 4.36 No 56 0.31 No 0 0 No -38 0.88 Yes 50 37.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32918450 + NM_000059 BRCA2 0 . . . 9.75 87.51 12 4.24 No 58 -1.07 No 0 0 No -31 0.81 Yes 51 81.65 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190659104 + NM_000534 PMS1 0 . . . 3.68 70.85 37 6.82 Yes 23 1.59 Yes 0 0 No -23 0.52 No 42 87.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94156230 - NM_005591 MRE11 0 . . . 5.73 72.18 21 5.84 Yes 41 0.71 No 0 0 No -27 0.64 No 45 69.84 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48028432 + NM_000179 MSH6 0 . . . 5.27 72.36 10 5.41 No 19 0.13 No 0 0 No -18 0.63 No 39 84.11 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68846251 + NM_004360 CDH1 0 . . . 0.39 57.31 25 5.39 No 14 0.71 No 0 0 No -24 0.56 No 44 81.4 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69145660 + NM_133509 RAD51B 0 . . . 0.16 62.75 18 4.51 No 47 0.66 No 0 0 No -60 0.15 No 35 54.65 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47657239 + NM_000251 MSH2 0 . . . 0.95 71.87 30 6.86 Yes 59 1.57 Yes 0 0 No -29 0.58 No 20 75.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108152264 + NM_000051 ATM 0 . . . 0.17 77.89 37 4.04 No 69 -2.83 No 0 0 No -36 0.82 Yes 61 39.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37053450 + NM_000249 MLH1 0 . . . 2.75 80.46 17 4.64 No 26 -3.82 No 0 0 No -47 0.82 Yes 48 67.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68699548 + NM_133509 RAD51B 0 . . . 3.4 84.45 33 8.42 Yes 50 1.94 Yes 0 0 No -32 0.96 Yes 50 97.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190694803 + NM_000534 PMS1 0 . . . 0.68 72.02 17 4.39 No 71 0.86 Yes 0 0 No -16 0.65 No 40 53.21 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47783714 + NM_000251 MSH2 0 . . . 0.99 70.29 26 5.66 Yes 3 0.12 No 0 0 No -25 0.74 Yes 51 34.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48006816 + NM_000179 MSH6 0 . . . 1.73 65.66 22 4.81 No 34 1.46 Yes 0 0 No -26 0.52 No 24 45.64 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108241337 + NM_000051 ATM 0 . . . 7.16 89.46 17 5.07 No 21 0.57 No 0 0 No -29 0.68 Yes 44 84.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215653634 - NM_000465 BARD1 0 . . . 10.21 84.73 17 5.31 No 71 -2.48 No 0 0 No -26 0.79 Yes 45 73.17 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68945943 + NM_133509 RAD51B 0 . . . 5.62 83.23 27 5.16 No 7 0.12 No 0 0 No -24 0.32 No 45 47.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68510438 + NM_133509 RAD51B 0 . . . 0.68 66.52 21 4.37 No -1 0.48 No 0 0 No -20 0.78 Yes 46 53.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47741555 + NM_000251 MSH2 0 . . . 10.06 87.81 24 3.77 No 4 1.89 Yes 0 0 No -18 0.37 No 33 68.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68855687 + NM_004360 CDH1 0 . . . 1.87 76.47 29 5.37 No 0 0.65 No 0 0 No -28 0.51 No 49 75.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68289638 + NM_133509 RAD51B 0 . . . 1.69 66.12 20 3.65 No 75 -6.44 No 0 0 No -40 0.88 Yes 43 46.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68537128 + NM_133509 RAD51B 0 . . . 6.96 88.75 15 4.47 No 40 0.42 No 0 0 No -13 0.39 No 51 70.5 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59886151 - NM_032043 BRIP1 0 . . . 0.87 0 24 5.29 No 9 1.28 Yes 23 0.74 Yes -21 0.42 No 49 55.02 No BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: No chr19 1222649 + NM_000455 STK11 0 . . . 4.38 70.55 30 5.56 Yes 76 -3.61 No 0 0 No -29 0.85 Yes 30 74.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90954429 - NM_002485 NBN 0 . . . 3.56 74.72 29 5.19 No 15 0.1 No 0 0 No -28 0.43 No 38 56.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105178432 + NM_021930 RINT1 0 . . . 3.27 75.49 21 4.66 No 70 0.3 No 0 0 No -20 0.72 Yes 44 36.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90986506 - NM_002485 NBN 0 . . . 0.42 0 23 3.37 No 56 0.67 No 0 0 No -23 0.61 No 48 60.49 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215633547 - NM_000465 BARD1 0 . . . 0.93 0 17 5.2 No 6 1.02 Yes 0 0 No -34 0.77 Yes 52 88.92 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69078700 + NM_133509 RAD51B 0 . . . 6.23 73.51 26 5.71 Yes 12 0.79 Yes 0 0 No -25 0.71 Yes 46 92.04 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131906459 + NM_005732 RAD50 0 . . . 1.01 73.54 28 5.38 No 51 1.04 Yes 0 0 No -27 0.46 No 40 75.98 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68483430 + NM_133509 RAD51B 0 . . . 2.9 76.5 14 4.47 No 22 1.57 Yes 0 0 No -57 0.48 No 44 44.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108147077 + NM_000051 ATM 0 . . . 4.24 69.94 20 5.1 No 3 0.66 No 0 0 No -19 0.42 No 39 95.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68867759 + NM_004360 CDH1 0 . . . 2.86 70.59 37 5.99 Yes 0 0.18 No 0 0 No -30 0.52 No 43 95.39 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59933417 - NM_032043 BRIP1 0 . . . 3.24 79.83 20 7.14 Yes 8 0.5 No 0 0 No -19 0.74 Yes 50 83.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68530923 + NM_133509 RAD51B 0 . . . 9.55 83.33 27 6.98 Yes 36 1.03 Yes 0 0 No -26 0.83 Yes 37 57.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84388618 - NM_139076 FAM175A 0 . . . 1.11 73.26 17 5.29 No 57 0.85 Yes 0 0 No -27 0.56 No 45 48.58 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69068597 + NM_133509 RAD51B 0 . . . 0.46 0 25 5.57 Yes 30 1.2 Yes 0 0 No -42 0.86 Yes 28 57.31 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr9 21978730 - NM_000077 CDKN2A 0 . . . 3.72 63.94 17 6.08 Yes 55 1.81 Yes 0 0 No -16 0.59 No 48 57.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68303297 + NM_133509 RAD51B 0 . . . 6.14 88.68 26 5.26 No 9 0.62 No 0 0 No -26 0.46 No 49 91.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89729795 + NM_000314 PTEN 0 . . . 4.88 79.8 26 6.86 Yes 37 0.04 No 0 0 No -25 0.94 Yes 53 66.09 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190656783 + NM_000534 PMS1 0 . . . 4.25 76.46 32 5.74 Yes 35 0.94 Yes 0 0 No -28 0.3 No 30 43.88 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59761698 - NM_032043 BRIP1 0 . . . 1.53 64.07 15 5.39 No 54 0.92 Yes 0 0 No -28 0.24 No 53 44.54 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23636461 - NM_024675 PALB2 0 . . . 1.92 74.73 16 4.44 No 33 1 Yes 0 0 No -26 0.7 Yes 42 44.92 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56790820 + NM_058216 RAD51C 0 . . . 1.11 85.23 28 6.34 Yes 33 0.56 No 0 0 No -27 0.73 Yes 50 87.34 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89652399 + NM_000314 PTEN 0 . . . 0.53 59.03 23 4.87 No 46 0.86 Yes 0 0 No -22 0.94 Yes 43 46.33 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29122966 - NM_001005735 CHEK2 0 . . . 0.3 72.77 27 7.57 Yes 70 -3.71 No 0 0 No -24 0.62 No 49 59.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69097331 + NM_133509 RAD51B 0 . . . 0.57 78.5 16 4.33 No 12 0.58 No 0 0 No -56 0.53 No 46 66.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105172199 + NM_021930 RINT1 0 . . . 2.74 0 14 4.99 No 12 1.19 Yes 0 0 No -27 0.53 No 43 64.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68702025 + NM_133509 RAD51B 0 . . . 3.08 69.64 31 5.66 Yes -3 0.75 No 0 0 No -30 0.81 Yes 43 90.05 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68855711 + NM_133509 RAD51B 0 . . . 0.15 0 9 5.29 No 35 1.07 Yes 0 0 No -26 0.42 No 28 60.25 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68663628 + NM_133509 RAD51B 0 . . . 0.48 81.39 19 5.29 No 31 0.36 No 0 0 No -23 0.5 No 46 89.53 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68763801 + NM_133509 RAD51B 0 . . . 0.09 61.13 23 4.8 No 19 0.37 No 0 0 No -22 0.75 Yes 39 70.39 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr1 45804374 - NM_001048171 MUTYH 0 . . . 5.42 69.04 28 5.83 Yes 59 -2.36 No 0 0 No -27 0.84 Yes 34 19.21 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59881595 - NM_032043 BRIP1 0 . . . 3.89 71.02 29 6.55 Yes 68 0.01 No 0 0 No -28 0.77 Yes 42 37.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59852933 - NM_032043 BRIP1 0 . . . 2 66.31 25 6.35 Yes 56 1.22 Yes 0 0 No -24 0.75 Yes 40 70.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33427189 - NM_002878 RAD51D 0 . . . 2.41 71.61 19 5.9 Yes 9 1.2 Yes 0 0 No -30 0.51 No 49 49.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr8 90991495 - NM_002485 NBN 0 . . . 2.05 67.33 18 4.62 No 58 0.99 Yes 0 0 No -21 0.76 Yes 41 69.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89631846 + NM_000314 PTEN 0 . . . 7.02 83.5 18 5.43 No 3 0.78 Yes 0 0 No -18 0.67 Yes 51 78.15 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6024306 - NM_000535 PMS2 0 . . . 4.28 74.24 27 5.2 No 42 0.89 Yes 0 0 No -26 0.71 Yes 42 52.44 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68435064 + NM_133509 RAD51B 0 . . . 6.14 76.18 14 5 No 15 0.7 No 0 0 No -28 0.25 No 43 92.76 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84401358 - NM_139076 FAM175A 0 . . . 5.5 85.02 35 4.15 No 7 1.29 Yes 0 0 No -35 0.75 Yes 51 88.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23629384 - NM_024675 PALB2 0 . . . 1.54 83.33 21 4.97 No 76 1.23 Yes 0 0 No -20 0.59 No 48 62.92 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56770931 + NM_058216 RAD51C 0 . . . 1.17 70.72 15 6.08 Yes -2 0.5 No 0 0 No -18 0.55 No 60 85.46 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69079070 + NM_133509 RAD51B 0 . . . 0.89 0 36 5.7 Yes 34 -1.79 No 0 0 No -21 0.62 No 24 26.14 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68784895 + NM_133509 RAD51B 0 . . . 2.51 77.72 18 5.39 No 71 -3.07 No 0 0 No -20 0.29 No 48 53.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108173622 + NM_000051 ATM 0 . . . 0.59 73.79 20 4.71 No 47 1.72 Yes 0 0 No -28 0.6 No 49 81.72 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29109482 - NM_001005735 CHEK2 0 . . . 0.44 63.02 24 5.34 No 56 1.22 Yes 0 0 No -24 0.38 No 42 61.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89621664 + NM_000314 PTEN 0 . . . 2.88 66.92 19 5 No 65 -1.65 No 0 0 No -18 0.48 No 45 64.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68557443 + NM_133509 RAD51B 0 . . . 3.97 75.24 63 7.61 Yes 42 0.73 No 0 0 No -26 0.6 No 42 41.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94212557 - NM_005591 MRE11 0 . . . 1.12 0 27 4.48 No 57 -5.34 No 0 0 No -27 0.41 No 48 84.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215634159 - NM_000465 BARD1 0 . . . 2.02 68.31 37 6.4 Yes 74 0.81 Yes 0 0 No -34 0.67 Yes 47 86.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59917691 - NM_032043 BRIP1 0 . . . 4.93 84.04 37 6.26 Yes 65 -1.48 No 0 0 No -25 0.91 Yes 45 15.82 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59821742 - NM_032043 BRIP1 0 . . . 0.88 78.84 41 5.51 No 36 0.81 Yes 0 0 No -31 0.55 No 37 70.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68626810 + NM_133509 RAD51B 0 . . . 6.46 85.91 34 7.1 Yes 12 0.78 Yes 0 0 No -33 0.4 No 46 58.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68587149 + NM_133509 RAD51B 0 . . . 2.01 67.44 34 5.12 No 46 0.63 No 0 0 No -29 0.45 No 52 38.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41025440 + NM_001164269 RAD51 0 . . . 0.48 62.54 28 5.38 No 72 -1.9 No 0 0 No -27 0.84 Yes 44 46.68 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131934433 + NM_005732 RAD50 0 . . . 3.57 77.1 22 4.8 No 76 1.32 Yes 0 0 No -21 0.9 Yes 35 90.69 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68637098 + NM_133509 RAD51B 0 . . . 4.31 76.9 65 7.49 Yes 45 -3.9 No 0 0 No -42 0.65 No 45 70.94 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47676821 + NM_000251 MSH2 0 . . . 1.74 72.4 14 4.51 No 52 0.51 No 0 0 No -27 0.36 No 33 59.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68971796 + NM_133509 RAD51B 0 . . . 2.4 65.88 18 4.9 No 10 0.4 No 0 0 No -22 0.31 No 45 81.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68749496 + NM_133509 RAD51B 0 . . . 5.21 90.07 10 5 No 55 0.4 No 0 0 No -18 0.6 No 44 67.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59807732 - NM_032043 BRIP1 0 . . . 4.11 88.76 33 6.95 Yes 4 1.13 Yes 0 0 No -23 0.49 No 50 51.97 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59894484 - NM_032043 BRIP1 0 . . . 4.5 90.56 23 5.2 No 67 0.51 No 0 0 No -22 0.71 Yes 46 46.35 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68830489 + NM_133509 RAD51B 0 . . . 4.52 70.84 34 5.74 Yes 48 1.19 Yes 0 0 No -29 0.81 Yes 50 45.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr4 84405414 - NM_139076 FAM175A 0 . . . 6.78 73.23 29 7.68 Yes 16 0.54 No 0 0 No -28 0.94 Yes 46 54.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68879597 + NM_133509 RAD51B 0 . . . 0.88 64.04 19 4.87 No 25 -3.45 No 0 0 No -22 0.4 No 34 28.43 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59896074 - NM_032043 BRIP1 0 . . . 3.19 78.56 11 4.12 No 2 0.86 Yes 0 0 No -26 0.71 Yes 48 82.85 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68391337 + NM_133509 RAD51B 0 . . . 4.47 71.47 27 4.3 No 56 -2.58 No 0 0 No -26 0.78 Yes 41 39.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56806921 + NM_058216 RAD51C 0 . . . 7.61 83.69 48 7.35 Yes 6 1.14 Yes 0 0 No -47 0.5 No 48 48.6 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68455619 + NM_133509 RAD51B 0 . . . 6.76 83.04 28 5.97 Yes 12 0.65 No 0 0 No -27 0.75 Yes 46 44.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68850270 + NM_004360 CDH1 0 . . . 6.92 78.49 21 5.1 No 27 0.48 No 0 0 No -27 0.65 No 42 77.97 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47714800 + NM_000251 MSH2 0 . . . 5.89 82.17 21 4.99 No 64 -1.52 No 0 0 No -28 0.53 No 51 55.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190732655 + NM_000534 PMS1 0 . . . 0.09 69.38 24 7.14 Yes 33 1.43 Yes 0 0 No -23 0.9 Yes 16 53.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89684142 + NM_000314 PTEN 0 . . . 5.77 80.56 25 4.76 No 6 0.65 No 0 0 No -24 0.78 Yes 42 66.41 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131897973 + NM_005732 RAD50 0 . . . 5.75 80.59 81 7.21 Yes 3 1.14 Yes 0 0 No -48 0.62 No 45 71.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41023098 + NM_001164269 RAD51 0 . . . 1.49 78.92 16 5.74 Yes 65 1.01 Yes 0 0 No -19 0.5 No 38 24.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94228580 - NM_005591 MRE11 0 . . . 8.17 83.24 34 7.37 Yes 6 1.99 Yes 0 0 No -28 0.86 Yes 45 64.39 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108239978 + NM_000051 ATM 0 . . . 0.78 67.37 13 5.29 No -3 1 Yes 0 0 No -25 0.49 No 61 24.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68302059 + NM_133509 RAD51B 0 . . . 3.81 79.88 31 5.63 Yes 50 -3.59 No 0 0 No -30 0.92 Yes 48 87.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68869199 + NM_004360 CDH1 0 . . . 1.55 76.91 28 5.65 Yes 11 0.29 No 0 0 No -24 0.48 No 47 60.99 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94200112 - NM_005591 MRE11 0 . . . 2.47 0 20 4.47 No 37 1.08 Yes 0 0 No -15 0.4 No 45 95.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69034213 + NM_133509 RAD51B 0 . . . 3.97 69.92 11 4.58 No 7 1.7 Yes 0 0 No -48 0.67 Yes 51 46.34 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69121458 + NM_133509 RAD51B 0 . . . 1.67 0 13 5 No 44 0.73 No 0 0 No -23 0.61 No 62 25.12 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21996251 - NM_000077 CDKN2A 0 . . . 6.25 81.49 20 5.74 Yes 7 1.55 Yes 0 0 No -19 0.77 Yes 44 83.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59875669 - NM_032043 BRIP1 0 . . . 1.68 53.16 26 5.03 No 12 1.32 Yes 0 0 No -39 0.52 No 31 49.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105187826 + NM_021930 RINT1 0 . . . 7.87 86.87 21 5.2 No 5 0.97 Yes 0 0 No -20 0.75 Yes 49 94.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47685659 + NM_000251 MSH2 0 . . . 4.17 72.34 28 5.3 No 4 1.05 Yes 0 0 No -27 0.58 No 50 68.07 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6023055 - NM_000535 PMS2 0 . . . 5.64 74.55 20 4.78 No 37 1.44 Yes 0 0 No -19 0.82 Yes 46 59.87 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr3 37074936 + NM_000249 MLH1 0 . . . 0.73 67.97 11 5.56 Yes 37 0.52 No 0 0 No -28 0.24 No 49 76.64 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32928808 + NM_000059 BRCA2 0 . . . 0.05 69.88 25 5.39 No 35 0.56 No 0 0 No -22 0.78 Yes 39 95.38 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68897488 + NM_133509 RAD51B 0 . . . 4.24 76.22 22 6.08 Yes 34 1.32 Yes 0 0 No -21 0.88 Yes 24 95.98 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59925275 - NM_032043 BRIP1 0 . . . 3.79 82.17 18 4.31 No 43 0.02 No 0 0 No -17 0.84 Yes 50 95.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68651456 + NM_133509 RAD51B 0 . . . 5.07 76.52 29 5.72 Yes 25 0.36 No 0 0 No -28 0.92 Yes 33 57.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94157710 - NM_005591 MRE11 0 . . . 6.24 83.55 29 5.91 Yes 27 0.99 Yes 0 0 No -28 0.71 Yes 49 73.71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29105651 - NM_001005735 CHEK2 0 . . . 0.94 76.63 20 4.36 No 58 -3.88 No 0 0 No -27 0.68 Yes 47 34.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215655134 - NM_000465 BARD1 0 . . . 7.51 79.54 17 4.8 No 33 1.12 Yes 0 0 No -21 0.38 No 25 95.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68400959 + NM_133509 RAD51B 0 . . . 2.84 67.48 13 5 No 63 0.88 Yes 0 0 No -23 0.63 No 45 96.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94202785 - NM_005591 MRE11 0 . . . 1.01 0 13 5.27 No 4 0.2 No 0 0 No -15 0.34 No 44 95.35 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68697505 + NM_133509 RAD51B 0 . . . 6.2 79.3 28 5.66 Yes 14 0.37 No 0 0 No -31 0.57 No 44 67.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68466344 + NM_133509 RAD51B 0 . . . 6.43 89.93 19 4.8 No 12 1.37 Yes 0 0 No -44 0.76 Yes 46 92.8 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32895731 + NM_000059 BRCA2 0 . . . 2.71 67.61 20 4.34 No 76 0.65 No 0 0 No -22 0.59 No 42 75.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108159446 + NM_000051 ATM 0 . . . 5.05 73.93 27 5.33 No 10 0.79 Yes 0 0 No -26 0.77 Yes 40 73.29 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68453659 + NM_133509 RAD51B 0 . . . 1.65 74.73 14 5.09 No 33 1.02 Yes 0 0 No -21 0.27 No 20 53.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68284845 + NM_133509 RAD51B 0 . . . 5.95 82.74 15 5.74 Yes 55 0.78 Yes 0 0 No -29 0.26 No 20 66.19 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68949700 + NM_133509 RAD51B 0 . . . 2.83 78.8 15 4.44 No 64 -2 No 0 0 No -18 0.79 Yes 44 77.55 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41253554 - NM_007294 BRCA1 0 . . . 0.63 0 18 4.58 No 52 -3.73 No 0 0 No -20 0.8 Yes 51 35.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89688964 + NM_000314 PTEN 0 . . . 0.82 64.95 29 5.06 No -4 0.51 No 0 0 No -28 0.7 Yes 42 78.88 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68635695 + NM_133509 RAD51B 0 . . . 1.23 0 10 4 No 14 0.2 No 0 0 No -27 0.88 Yes 30 57.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89635863 + NM_000314 PTEN 0 . . . 5.09 67.24 23 4.68 No 35 0.56 No 0 0 No -18 0.54 No 34 70.49 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68325211 + NM_133509 RAD51B 0 . . . 7.94 83.56 20 5 No 58 0.46 No 0 0 No -19 0.78 Yes 48 93.29 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59932775 - NM_032043 BRIP1 0 . . . 5.2 85.02 16 4.69 No 5 1.09 Yes 0 0 No -21 0.41 No 53 76.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104167929 - NM_001100119 XRCC3 0 . . . 0.38 69.22 19 5 No 58 1.67 Yes 0 0 No -18 0.5 No 52 38.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84396854 - NM_139076 FAM175A 0 . . . 2.59 66.6 39 6.32 Yes 45 -3.97 No 0 0 No -26 0.52 No 39 73.75 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90969124 - NM_002485 NBN 0 . . . 8.61 76.09 21 5.91 Yes 33 -3.67 No 0 0 No -20 0.77 Yes 44 80.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23643214 - NM_024675 PALB2 0 . . . 1.14 76.63 37 6.16 Yes 15 0.34 No 0 0 No -28 0.46 No 43 39.98 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69043270 + NM_133509 RAD51B 0 . . . 2.9 0 37 6.08 Yes 2 0.49 No 0 0 No -33 0.45 No 49 76.24 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108225097 + NM_000051 ATM 0 . . . 2.12 70.49 27 5.47 No 41 1.94 Yes 0 0 No -29 0.56 No 43 68.68 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33436045 - NM_002878 RAD51D 0 . . . 3.07 71.27 18 5.65 Yes 57 -2.79 No 0 0 No -17 0.55 No 46 43.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59867806 - NM_032043 BRIP1 0 . . . 3.16 86.06 18 4.55 No 33 1.31 Yes 0 0 No -18 0.36 No 50 70.26 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68589829 + NM_133509 RAD51B 0 . . . 9.55 96.51 29 5.64 Yes 21 0.02 No 0 0 No -28 0.73 Yes 37 68.43 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69061810 + NM_133509 RAD51B 0 . . . 8.87 74.55 26 6.43 Yes 13 1.05 Yes 0 0 No -25 0.77 Yes 45 80.52 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215621280 - NM_000465 BARD1 0 . . . 6.75 82.83 32 6.51 Yes 75 0.8 Yes 0 0 No -21 0.78 Yes 37 65.93 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105179259 + NM_021930 RINT1 0 . . . 6.78 83.99 27 4.65 No 2 1.4 Yes 0 0 No -22 0.46 No 39 69.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68668286 + NM_133509 RAD51B 0 . . . 0.83 64.03 29 5.86 Yes 17 -2.69 No 0 0 No -28 0.59 No 55 45.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215628097 - NM_000465 BARD1 0 . . . 8.9 80.03 25 5.21 No 51 1.45 Yes 0 0 No -27 0.58 No 45 91.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68418117 + NM_133509 RAD51B 0 . . . 2.63 0 10 4.9 No 62 0.7 No 0 0 No -17 0.52 No 43 68.93 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108178854 + NM_000051 ATM 0 . . . 8.57 87.24 9 6.08 Yes 8 0.72 No 0 0 No -36 0.33 No 40 64.83 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68646288 + NM_133509 RAD51B 0 . . . 1.58 75.17 26 5.66 Yes 43 0.8 Yes 0 0 No -26 0.77 Yes 30 90.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68871023 + NM_133509 RAD51B 0 . . . 5.56 74.1 10 5.2 No 5 0.42 No 0 0 No -20 0.3 No 53 65.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68843132 + NM_133509 RAD51B 0 . . . 2.7 0 16 5.29 No 2 0.46 No 0 0 No -15 0.52 No 47 74.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90956798 - NM_002485 NBN 0 . . . 0.03 56.33 15 5.16 No 59 -4.65 No 0 0 No -26 0.55 No 59 68.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108239746 + NM_000051 ATM 0 . . . 6.92 85.01 14 5.26 No 11 0.62 No 0 0 No -23 0.26 No 47 63 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68368062 + NM_133509 RAD51B 0 . . . 1.02 63.9 21 4.99 No 10 0.63 No 0 0 No -26 0.39 No 48 79.15 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47680686 + NM_000251 MSH2 0 . . . 3.3 0 27 5.08 No 73 1.19 Yes 0 0 No -26 0.85 Yes 47 59.8 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68508438 + NM_133509 RAD51B 0 . . . 6.49 80.87 15 4.58 No 10 1.32 Yes 0 0 No -14 0.56 No 48 95.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68500694 + NM_133509 RAD51B 0 . . . 3.79 79.47 21 6.08 Yes 44 0.79 Yes 0 0 No -20 0.89 Yes 50 66.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr22 29102794 - NM_001005735 CHEK2 0 . . . 0.81 0 19 6.67 Yes 2 0.97 Yes 0 0 No -28 0.57 No 56 28.8 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68343256 + NM_133509 RAD51B 0 . . . 0.27 0 59 6.84 Yes 34 0.17 No 0 0 No -24 0.44 No 56 43.59 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108098462 + NM_000051 ATM 0 . . . 0.83 64.24 22 4.04 No 72 0.42 No 29 0.9 Yes -21 0.83 Yes 45 68.91 No BPP: No, SVM: No, Branch: , LB: Yes, RNABPS: No chr14 69143174 + NM_133509 RAD51B 0 . . . 3.91 72.67 44 6.53 Yes -4 0.35 No 0 0 No -35 0.77 Yes 52 40.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68446613 + NM_133509 RAD51B 0 . . . 2.73 73.48 19 5.38 No 72 -2.66 No 0 0 No -18 0.66 No 41 57.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68316961 + NM_133509 RAD51B 0 . . . 8.95 89.86 13 4.8 No 71 1.17 Yes 0 0 No -17 0.46 No 43 88.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68602806 + NM_133509 RAD51B 0 . . . 4.05 76.85 24 5.4 No 0 1.24 Yes 0 0 No -23 0.49 No 53 55.09 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59899412 - NM_032043 BRIP1 0 . . . 7.14 78.1 31 5.48 No 51 0.79 Yes 0 0 No -30 0.74 Yes 36 58.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59851012 - NM_032043 BRIP1 0 . . . 8.08 81.67 38 6.31 Yes 71 0.34 No 0 0 No -33 0.66 Yes 42 83.4 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68696377 + NM_133509 RAD51B 0 . . . 3.01 86.92 17 6.08 Yes 58 0.83 Yes 0 0 No -27 0.44 No 51 88.93 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152352051 - NM_005431 XRCC2 0 . . . 5.85 88.44 14 4.26 No 23 0.68 No 0 0 No -21 0.51 No 48 69.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108238914 + NM_000051 ATM 0 . . . 2.38 76.74 24 4.54 No -4 0.41 No 0 0 No -23 0.78 Yes 62 26.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr4 84390946 - NM_139076 FAM175A 0 . . . 4.89 82.51 43 8 Yes 6 0.58 No 0 0 No -19 0.45 No 52 92.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68832329 + NM_133509 RAD51B 0 . . . 2.07 78.26 22 6.78 Yes 27 0.45 No 0 0 No -21 0.92 Yes 46 47.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68309827 + NM_133509 RAD51B 0 . . . 5.44 85.14 25 4.79 No 58 1.17 Yes 0 0 No -22 0.86 Yes 33 46.66 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68826826 + NM_133509 RAD51B 0 . . . 4.54 69.27 23 5.67 Yes 28 0.45 No 0 0 No -22 0.63 No 41 49.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68831510 + NM_133509 RAD51B 0 . . . 2.35 68.55 46 8.38 Yes 75 0.25 No 0 0 No -20 0.85 Yes 44 35.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29083474 - NM_001005735 CHEK2 0 . . . 0.24 68.99 30 4.43 No 33 0.64 No 0 0 No -30 0.59 No 15 41.28 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68567396 + NM_133509 RAD51B 0 . . . 2.48 75.43 13 5.74 Yes 58 1.2 Yes 0 0 No -27 0.44 No 51 35.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29118501 - NM_001005735 CHEK2 0 . . . 3.41 84.17 21 4.89 No 64 1.92 Yes 0 0 No -20 0.66 No 10 13.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68835157 + NM_004360 CDH1 0 . . . 0.27 78.56 24 6.08 Yes 57 0.91 Yes 0 0 No -23 0.9 Yes 53 42.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69089972 + NM_133509 RAD51B 0 . . . 1.92 0 21 4.8 No 47 1.85 Yes 0 0 No -24 0.55 No 42 83.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68860743 + NM_133509 RAD51B 0 . . . 3.2 65.07 22 4.8 No -3 1.01 Yes 0 0 No -20 0.32 No 37 47.7 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190695074 + NM_000534 PMS1 0 . . . 0.23 0 47 6.93 Yes 64 1.66 Yes 0 0 No -25 0.86 Yes 55 20.16 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47734554 + NM_000251 MSH2 0 . . . 1.94 71.76 24 5.29 No 67 -4.96 No 0 0 No -23 0.91 Yes 43 65.92 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69114704 + NM_133509 RAD51B 0 . . . 1.8 62.93 33 8.15 Yes 25 -2.49 No 0 0 No -32 0.57 No 51 71.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 94193176 - NM_005591 MRE11 0 . . . 12.15 94.65 23 5.31 No 50 2.11 Yes 0 0 No -22 0.67 Yes 44 74.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59774857 - NM_032043 BRIP1 0 . . . 4.84 88.45 19 5.81 Yes 21 -2.06 No 0 0 No -19 0.66 Yes 44 45.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108226842 + NM_000051 ATM 0 . . . 5.88 82.87 55 8.94 Yes 30 0.33 No 0 0 No -29 0.47 No 49 65.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89640635 + NM_000314 PTEN 0 . . . 7.77 91.39 22 4.8 No 59 0.42 No 0 0 No -21 0.83 Yes 42 83.51 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68572401 + NM_133509 RAD51B 0 . . . 3.87 82.42 18 4.6 No 6 0.37 No 0 0 No -27 0.39 No 49 44.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59860764 - NM_032043 BRIP1 0 . . . 3.42 64.5 14 4.36 No -4 0.83 Yes 0 0 No -21 0.55 No 47 50.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68628879 + NM_133509 RAD51B 0 . . . 4.56 76.18 44 6.77 Yes 70 0.02 No 0 0 No -43 0.48 No 51 31.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37087785 + NM_000249 MLH1 0 . . . 5.18 86.7 32 5.98 Yes 5 1.25 Yes 0 0 No -32 0.61 No 46 55.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68332413 + NM_133509 RAD51B 0 . . . 5.41 80.03 15 5.39 No 72 0.95 Yes 0 0 No -34 0.35 No 53 50.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108110364 + NM_000051 ATM 0 . . . 6.02 88.56 20 4.9 No 4 0.99 Yes 0 0 No -19 0.84 Yes 46 90.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69029352 + NM_133509 RAD51B 0 . . . 5.15 72.26 17 4.46 No 65 1.82 Yes 0 0 No -35 0.72 Yes 42 86.36 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29102689 - NM_001005735 CHEK2 0 . . . 5.92 82.31 20 5.06 No 58 1.02 Yes 0 0 No -19 0.67 Yes 55 48.24 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68568399 + NM_133509 RAD51B 0 . . . 3.12 0 25 4.76 No 68 -1.93 No 0 0 No -24 0.62 No 47 57.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37075339 + NM_000249 MLH1 0 . . . 3.27 84.98 23 4.89 No 32 0.41 No 0 0 No -23 0.79 Yes 26 66.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89650359 + NM_000314 PTEN 0 . . . 1.65 0 25 5.39 No 56 0.91 Yes 0 0 No -22 0.74 Yes 39 31.85 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59874416 - NM_032043 BRIP1 0 . . . 5.39 62.26 33 9.12 Yes 58 0.34 No 0 0 No -36 0.47 No 44 73.93 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47655550 + NM_000251 MSH2 0 . . . 0.88 63.59 37 6.27 Yes 73 -4.86 No 0 0 No -19 0.75 Yes 60 26.29 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68805882 + NM_133509 RAD51B 0 . . . 5.66 76.59 17 4.24 No 43 1.48 Yes 0 0 No -16 0.74 Yes 44 88.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89683271 + NM_000314 PTEN 0 . . . 8.66 86.99 29 3.26 No 22 0.27 No 0 0 No -24 0.9 Yes 41 53.67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215614419 - NM_000465 BARD1 0 . . . 2.47 72.06 24 5.48 No 38 1.04 Yes 0 0 No -23 0.78 Yes 48 61.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68885633 + NM_133509 RAD51B 0 . . . 1.01 0 37 7.29 Yes 6 0.01 No 0 0 No -42 0.5 No 45 41.05 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215625545 - NM_000465 BARD1 0 . . . 1.15 76.63 14 4.95 No 58 -3.89 No 0 0 No -48 0.44 No 55 39.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69083775 + NM_133509 RAD51B 0 . . . 10.2 94 30 6.41 Yes 34 1.58 Yes 0 0 No -29 0.89 Yes 40 94.43 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89627947 + NM_000314 PTEN 0 . . . 1.49 72.86 15 4.58 No 57 0.26 No 0 0 No -56 0.44 No 41 79.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68836812 + NM_004360 CDH1 0 . . . 8.73 84.57 41 6.86 Yes 22 0.71 No 0 0 No -25 0.74 Yes 42 58.76 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59890958 - NM_032043 BRIP1 0 . . . 0.96 57.66 33 5.57 Yes 67 0.18 No 0 0 No -25 0.61 No 32 73.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29128146 - NM_001005735 CHEK2 0 . . . 2.31 80.22 38 7.72 Yes 15 0.43 No 0 0 No -37 0.79 Yes 43 51.63 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220492 - NM_007294 BRCA1 0 . . . 0.93 80.65 19 4.8 No 8 0.36 No 0 0 No -18 0.87 Yes 50 83 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47639646 + NM_000251 MSH2 0 . . . 0.37 71.05 15 5.1 No 36 1.5 Yes 0 0 No -28 0.47 No 43 33.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33430640 - NM_002878 RAD51D 0 . . . 1.08 0 23 4.16 No 54 -1.91 No 0 0 No -22 0.54 No 24 71.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215661757 - NM_000465 BARD1 0 . . . 3.1 73.36 18 4.69 No 68 0.79 Yes 0 0 No -23 0.74 Yes 45 46.22 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68536916 + NM_133509 RAD51B 0 . . . 0.66 60.95 30 6.29 Yes 53 0.76 No 0 0 No -29 0.86 Yes 20 71.91 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108191910 + NM_000051 ATM 0 . . . 4.64 74.64 43 4.7 No 3 1.02 Yes 0 0 No -36 0.7 Yes 44 86.02 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 33424843 - NM_002878 RAD51D 0 . . . 0.8 0 13 4.36 No 24 2 Yes 0 0 No -21 0.38 No 34 89.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68774916 + NM_133509 RAD51B 0 . . . 1.21 71.42 29 5.48 No 32 0.84 Yes 0 0 No -28 0.9 Yes 54 44.28 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68952974 + NM_133509 RAD51B 0 . . . 4.57 75.1 24 5 No 28 1.9 Yes 0 0 No -23 0.92 Yes 46 61.27 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69086311 + NM_133509 RAD51B 0 . . . 2.27 0 46 6.86 Yes 75 -4.13 No 0 0 No -45 0.49 No 53 84.88 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68569292 + NM_133509 RAD51B 0 . . . 3.9 75.04 30 5.43 No 41 1.05 Yes 0 0 No -29 0.8 Yes 50 85.18 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90962010 - NM_002485 NBN 0 . . . 3.84 79.13 18 4.66 No 27 0.78 Yes 0 0 No -45 0.32 No 30 36.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56799948 + NM_058216 RAD51C 0 . . . 6.28 87.97 29 5.8 Yes 76 1.18 Yes 0 0 No -28 0.71 Yes 45 87.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37047351 + NM_000249 MLH1 0 . . . 3.22 78.42 18 4.9 No 71 1.42 Yes 24 0.62 Yes -17 0.41 No 46 70.97 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr8 90956675 - NM_002485 NBN 0 . . . 6.35 73.8 39 6.16 Yes 14 0.06 No 0 0 No -29 0.42 No 44 77.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69150672 + NM_133509 RAD51B 0 . . . 4.58 76.97 16 4.69 No 7 1.87 Yes 0 0 No -22 0.31 No 51 69.15 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68825918 + NM_004360 CDH1 0 . . . 5.99 86.2 20 4.6 No 9 0.98 Yes 0 0 No -23 0.55 No 49 86.47 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131943163 + NM_005732 RAD50 0 . . . 5.08 71.28 20 4.36 No 59 0.68 No 0 0 No -23 0.71 Yes 45 45.43 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68370755 + NM_133509 RAD51B 0 . . . 0.02 0 31 5.78 Yes 52 0.71 No 0 0 No -30 0.76 Yes 36 61.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47656079 + NM_000251 MSH2 0 . . . 2.65 0 41 7.32 Yes 35 0.7 No 0 0 No -40 0.72 Yes 39 93.93 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 56810926 + NM_058216 RAD51C 0 . . . 3.04 69.25 26 6.24 Yes -4 0.84 Yes 0 0 No -25 0.64 No 32 30.27 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68804356 + NM_004360 CDH1 0 . . . 11.59 89.6 18 6.44 Yes 7 1.47 Yes 0 0 No -31 0.55 No 51 73.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 33448086 - NM_002878 RAD51D 0 . . . 2.2 70.17 15 5.21 No 13 0.37 No 0 0 No -24 0.78 Yes 45 60.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94166282 - NM_005591 MRE11 0 . . . 1.54 72.03 29 4.32 No 66 -3.78 No 0 0 No -24 0.81 Yes 54 56.4 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47734862 + NM_000251 MSH2 0 . . . 2.68 73.52 29 5.4 No 62 -3.3 No 0 0 No -28 0.78 Yes 44 63.8 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68616780 + NM_133509 RAD51B 0 . . . 0.78 84.22 26 6.08 Yes 33 0.98 Yes 0 0 No -25 0.74 Yes 25 37.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68842231 + NM_004360 CDH1 0 . . . 5.03 78.67 16 4.92 No 69 0.21 No 0 0 No -20 0.72 Yes 41 64.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68571296 + NM_133509 RAD51B 0 . . . 2.57 82.91 20 5.1 No 21 1.38 Yes 0 0 No -30 0.71 Yes 37 85.21 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41195261 - NM_007294 BRCA1 0 . . . 1.84 67.42 14 3.63 No 0 1.26 Yes 0 0 No -23 0.56 No 33 75.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47789594 + NM_000251 MSH2 0 . . . 0.61 65.22 17 5.84 Yes -3 1.47 Yes 0 0 No -23 0.44 No 47 60.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94196118 - NM_005591 MRE11 0 . . . 1.11 70.97 91 8.9 Yes 15 1.4 Yes 0 0 No -44 0.44 No 43 95.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108129244 + NM_000051 ATM 0 . . . 0.8 65.02 27 5.32 No 45 0.86 Yes 0 0 No -26 0.64 No 44 91.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89644863 + NM_000314 PTEN 0 . . . 3.98 70.28 25 6.45 Yes 3 0.25 No 0 0 No -22 0.67 Yes 39 52.87 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94179124 - NM_005591 MRE11 0 . . . 6.9 82.29 13 4.8 No 18 0.57 No 0 0 No -21 0.43 No 50 86.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29094573 - NM_001005735 CHEK2 0 . . . 2 81.31 25 5.44 No 10 -0.81 No 0 0 No -25 0.66 No 48 87.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68566511 + NM_133509 RAD51B 0 . . . 4.98 77.41 17 4.69 No 10 0.25 No 0 0 No -39 0.41 No 47 75.68 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 52445059 - NM_004656 BAP1 0 . . . 6.57 83.56 28 5.16 No 37 0.09 No 0 0 No -27 0.74 Yes 48 51.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41196454 - NM_007294 BRCA1 0 . . . 4.51 78.35 38 6.39 Yes 2 0.38 No 0 0 No -34 0.66 Yes 53 35.67 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56802794 + NM_058216 RAD51C 0 . . . 8.28 90.15 27 4.94 No 18 0.61 No 0 0 No -21 0.54 No 44 78.77 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215650022 - NM_000465 BARD1 0 . . . 0.93 66.5 23 6.55 Yes 57 -4.71 No 0 0 No -22 0.91 Yes 19 36.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68349346 + NM_133509 RAD51B 0 . . . 7.62 81.01 32 6.15 Yes 25 0.44 No 0 0 No -29 0.84 Yes 33 59.68 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105181711 + NM_021930 RINT1 0 . . . 8.07 79.41 26 5 No 36 0.99 Yes 0 0 No -25 0.52 No 43 61.03 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47783688 + NM_000251 MSH2 0 . . . 0.05 67.22 34 6.74 Yes 6 -0.89 No 0 0 No -33 0.67 Yes 52 87.66 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59829711 - NM_032043 BRIP1 0 . . . 9.19 84.14 14 5.74 Yes -3 -0.73 No 0 0 No -24 0.38 No 42 77.86 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32893792 + NM_000059 BRCA2 0 . . . 0.74 73.85 31 6.08 Yes 63 0.85 Yes 0 0 No -30 0.63 No 44 78.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131970898 + NM_005732 RAD50 0 . . . 4.59 68.99 41 8.79 Yes 5 1.24 Yes 0 0 No -36 0.67 Yes 41 41.22 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59891137 - NM_032043 BRIP1 0 . . . 4.39 73.14 17 4.64 No 25 0.92 Yes 0 0 No -25 0.5 No 33 62.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68437968 + NM_133509 RAD51B 0 . . . 1.78 62.2 25 5.54 No 17 -1.89 No 0 0 No -24 0.83 Yes 45 61.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48028557 + NM_000179 MSH6 0 . . . 1.54 0 32 5.1 No 47 0.51 No 0 0 No -31 0.78 Yes 11 89.64 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 152364463 - NM_005431 XRCC2 0 . . . 5.72 90.92 37 6.24 Yes 49 1.32 Yes 0 0 No -36 0.82 Yes 11 40.5 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47638366 + NM_000251 MSH2 0 . . . 0.94 84.22 19 4.8 No 33 0.98 Yes 0 0 No -16 0.74 Yes 50 56.06 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41242262 - NM_007294 BRCA1 0 . . . 4.08 87.22 16 4.69 No 70 -4.17 No 0 0 No -18 0.39 No 46 79.28 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41230810 - NM_007294 BRCA1 0 . . . 2.21 0 29 5.66 Yes 8 0.57 No 0 0 No -28 0.8 Yes 50 34.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68443045 + NM_133509 RAD51B 0 . . . 2.87 85.17 30 5.92 Yes 12 0.67 No 0 0 No -29 0.73 Yes 46 89.73 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108218960 + NM_000051 ATM 0 . . . 3.53 70.06 29 5.46 No 64 -5.52 No 0 0 No -26 0.52 No 49 64.88 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68364751 + NM_133509 RAD51B 0 . . . 1.45 61.58 31 6.22 Yes 63 -0.99 No 0 0 No -30 0.51 No 58 30.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47656002 + NM_000251 MSH2 0 . . . 0.11 68.25 21 4.58 No 57 0.91 Yes 0 0 No -20 0.67 Yes 38 32.16 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215605389 - NM_000465 BARD1 0 . . . 0.52 64.14 19 4.73 No 59 -4.7 No 0 0 No -18 0.35 No 49 17.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56799912 + NM_058216 RAD51C 0 . . . 6.27 78.76 20 6.71 Yes 40 1.16 Yes 0 0 No -19 0.92 Yes 46 70.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94151256 - NM_005591 MRE11 0 . . . 7.76 77.34 10 5.26 No 60 0.66 No 0 0 No -24 0.37 No 34 81.8 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59828829 - NM_032043 BRIP1 0 . . . 6.12 78.7 24 4.88 No 66 0.82 Yes 0 0 No -23 0.93 Yes 49 41.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69044694 + NM_133509 RAD51B 0 . . . 4.08 87.12 21 5.74 Yes 39 0.9 Yes 0 0 No -26 0.85 Yes 55 53.41 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32889476 + NM_000059 BRCA2 0 . . . 5.6 84.49 20 4.64 No -2 -1.61 No 0 0 No -41 0.5 No 48 90.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69007747 + NM_133509 RAD51B 0 . . . 6.1 76.38 19 4.8 No 48 1.01 Yes 0 0 No -18 0.47 No 35 88.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59832917 - NM_032043 BRIP1 0 . . . 11.04 94.28 29 6.32 Yes 57 1.33 Yes 0 0 No -21 0.42 No 43 74.54 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75515917 - NM_001040108 MLH3 0 . . . 1.33 69.7 35 6.33 Yes 57 -4.82 No 0 0 No -34 0.86 Yes 39 21.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59768578 - NM_032043 BRIP1 0 . . . 2.9 0 23 5 No 61 1.1 Yes 0 0 No -22 0.76 Yes 36 66.32 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 33426352 - NM_002878 RAD51D 0 . . . 0.46 79.02 27 5.04 No 39 -1.64 No 0 0 No -51 0.56 No 50 40.37 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69084411 + NM_133509 RAD51B 0 . . . 4.98 74.58 27 4.64 No 64 -2.88 No 0 0 No -24 0.53 No 44 56.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68674951 + NM_133509 RAD51B 0 . . . 1.35 72.2 33 6.19 Yes 46 0.73 No 0 0 No -32 0.62 No 38 72.74 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59835489 - NM_032043 BRIP1 0 . . . 2.59 68.45 28 5.39 No 65 0.71 No 0 0 No -27 0.83 Yes 42 48.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68316674 + NM_133509 RAD51B 0 . . . 2.3 85.23 24 6.33 Yes 74 0.87 Yes 0 0 No -31 0.42 No 45 86.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41012931 + NM_001164269 RAD51 0 . . . 2.37 79.21 31 6.47 Yes 71 -2.1 No 0 0 No -30 0.82 Yes 42 39.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68440798 + NM_133509 RAD51B 0 . . . 2.72 76.27 21 4.29 No 69 -6.75 No 0 0 No -18 0.5 No 50 70.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29117176 - NM_001005735 CHEK2 0 . . . 1.52 64.94 32 5.86 Yes 17 0.82 Yes 0 0 No -28 0.74 Yes 35 66.13 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215655392 - NM_000465 BARD1 0 . . . 5.88 82.12 26 5.66 Yes 13 0.43 No 0 0 No -25 0.87 Yes 47 52.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69084889 + NM_133509 RAD51B 0 . . . 8.63 88.18 28 5.16 No 2 0.88 Yes 0 0 No -27 0.89 Yes 43 65.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131919624 + NM_005732 RAD50 0 . . . 5.53 75.56 26 6.15 Yes 61 1.11 Yes 0 0 No -25 0.56 No 43 53.79 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68861967 + NM_133509 RAD51B 0 . . . 0.43 0 14 4.9 No 1 -1.19 No 0 0 No -49 0.62 No 49 34.09 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32950231 + NM_000059 BRCA2 0 . . . 3.06 62.34 67 9.78 Yes 13 0.07 No 0 0 No -28 0.88 Yes 35 61.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48007127 + NM_000179 MSH6 0 . . . 1.5 71.98 26 5.51 No 55 0.82 Yes 0 0 No -23 0.58 No 45 24.72 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68404481 + NM_133509 RAD51B 0 . . . 4.99 80.66 21 4.58 No 32 0.75 No 0 0 No -20 0.69 Yes 51 58.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68711259 + NM_133509 RAD51B 0 . . . 3.36 75.91 47 8.23 Yes 19 0.91 Yes 0 0 No -30 0.84 Yes 35 53.26 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94175137 - NM_005591 MRE11 0 . . . 3.01 0 18 5.38 No 23 1.84 Yes 0 0 No -30 0.63 No 35 87.42 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23628739 - NM_024675 PALB2 0 . . . 5.71 74.33 25 6.98 Yes 69 0.83 Yes 0 0 No -24 0.45 No 42 64.75 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69027961 + NM_133509 RAD51B 0 . . . 0.13 61.57 21 5.06 No 1 0.24 No 0 0 No -46 0.51 No 43 63.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23637500 - NM_024675 PALB2 0 . . . 4.56 65.52 32 5.28 No -3 0.15 No 0 0 No -31 0.65 No 48 75.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68617292 + NM_133509 RAD51B 0 . . . 6.1 73.4 15 5.74 Yes 13 0.58 No 0 0 No -31 0.37 No 45 72.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131974111 + NM_005732 RAD50 0 . . . 4.3 63.75 20 6.46 Yes 15 1.53 Yes 0 0 No -25 0.35 No 43 91.95 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41001915 + NM_001164269 RAD51 0 . . . 2.03 71.46 24 4.77 No 50 0.49 No 0 0 No -57 0.37 No 38 60.39 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 152346542 - NM_005431 XRCC2 0 . . . 6.22 86.8 18 5.26 No 64 1.3 Yes 0 0 No -23 0.77 Yes 45 59.09 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56778338 + NM_058216 RAD51C 0 . . . 4.17 75.72 43 7.75 Yes 38 1.24 Yes 0 0 No -42 0.55 No 44 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68843639 + NM_004360 CDH1 0 . . . 2.96 82.27 45 6.18 Yes 33 0.47 No 0 0 No -37 0.64 No 20 34.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274213 - NM_007294 BRCA1 0 . . . 4.48 69.27 29 7.28 Yes 11 0.55 No 0 0 No -28 0.92 Yes 36 39.81 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90973712 - NM_002485 NBN 0 . . . 0.33 0 40 6.7 Yes 62 1.76 Yes 0 0 No -19 0.56 No 38 62.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69142445 + NM_133509 RAD51B 0 . . . 0.53 69.74 26 5.19 No 68 0.58 No 0 0 No -25 0.65 No 52 27.89 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94190820 - NM_005591 MRE11 0 . . . 4.32 65.78 10 4.09 No 55 0.34 No 0 0 No -57 0.87 Yes 51 73.07 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 75515164 - NM_001040108 MLH3 0 . . . 4.58 69.34 26 7.69 Yes 60 0.63 No 0 0 No -30 0.74 Yes 53 49.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21976892 - NM_000077 CDKN2A 0 . . . 0.15 69.62 13 8.22 Yes 29 0.82 Yes 0 0 No -25 0.6 No 45 58 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 56797462 + NM_058216 RAD51C 0 . . . 2.81 69.4 32 8.57 Yes 75 0.78 Yes 0 0 No -31 0.46 No 51 40.63 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69124438 + NM_133509 RAD51B 0 . . . 5.92 81.17 18 5.98 Yes 58 0.71 No 0 0 No -25 0.51 No 47 48.84 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47730655 + NM_000251 MSH2 0 . . . 2.54 70.95 31 6.63 Yes 1 0.39 No 0 0 No -30 0.74 Yes 51 71.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69052009 + NM_133509 RAD51B 0 . . . 4.94 89.39 29 5.48 No 38 0.94 Yes 0 0 No -25 0.47 No 50 67.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 7586680 - NM_000546 TP53 0 . . . 0.09 74.68 18 4.61 No 66 1.08 Yes 0 0 No -26 0.62 No 54 85.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89663503 + NM_000314 PTEN 0 . . . 5.86 79.66 28 5.48 No 67 0.39 No 0 0 No -23 0.61 No 46 90.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69070522 + NM_133509 RAD51B 0 . . . 6.06 75.89 23 5.03 No 65 0.46 No 0 0 No -19 0.61 No 36 71.22 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69055137 + NM_133509 RAD51B 0 . . . 0.05 75.68 20 4.69 No 30 0.7 No 0 0 No -19 0.86 Yes 44 84.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89677192 + NM_000314 PTEN 0 . . . 0.11 50.35 29 6.58 Yes 43 1.04 Yes 0 0 No -28 0.78 Yes 22 39.06 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131947278 + NM_005732 RAD50 0 . . . 1.46 63.56 28 6.71 Yes 57 1.21 Yes 0 0 No -27 0.68 Yes 42 58.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68807219 + NM_133509 RAD51B 0 . . . 0 67.28 33 5.78 Yes 35 0.82 Yes 0 0 No -22 0.62 No 42 50.04 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59838282 - NM_032043 BRIP1 0 . . . 6.34 76.71 19 4.34 No 71 0.14 No 0 0 No -25 0.81 Yes 25 71.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23647358 - NM_024675 PALB2 0 . . . 3.78 76.33 15 7.54 Yes -2 0.63 No 0 0 No -37 0.85 Yes 42 46.51 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32948681 + NM_000059 BRCA2 0 . . . 2.72 76.1 27 7.28 Yes 4 1.32 Yes 0 0 No -26 0.71 Yes 54 43.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131945480 + NM_005732 RAD50 0 . . . 4.01 71.25 31 6.6 Yes 75 -3.43 No 0 0 No -30 0.64 No 45 45.61 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94178996 - NM_005591 MRE11 0 . . . 0.03 0 20 4.72 No 72 1.64 Yes 0 0 No -22 0.31 No 46 77.97 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131917080 + NM_005732 RAD50 0 . . . 1.09 0 18 6.07 Yes 18 0.74 No 0 0 No -30 0.77 Yes 40 64.92 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68590023 + NM_133509 RAD51B 0 . . . 3.71 80.65 41 7.19 Yes 33 1.03 Yes 0 0 No -40 0.5 No 50 88.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41248562 - NM_007294 BRCA1 0 . . . 5.29 84.21 50 6.47 Yes 41 1.45 Yes 0 0 No -35 0.56 No 17 96.03 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131971637 + NM_005732 RAD50 0 . . . 4.19 85.22 28 5.52 No 66 -3.49 No 0 0 No -27 0.57 No 45 38.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68295717 + NM_133509 RAD51B 0 . . . 3.58 61.94 14 4.36 No 70 0.56 No 0 0 No -32 0.52 No 32 81.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68789364 + NM_004360 CDH1 0 . . . 0.33 0 19 6.87 Yes 46 0.26 No 0 0 No -27 0.72 Yes 12 24.79 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89718389 + NM_000314 PTEN 0 . . . 3.07 72.7 20 4.91 No 0 1.46 Yes 0 0 No -19 0.56 No 45 49.28 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190735741 + NM_000534 PMS1 0 . . . 1.09 66.06 17 4.67 No 43 0.73 No 0 0 No -17 0.42 No 48 74.36 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56785803 + NM_058216 RAD51C 0 . . . 0.91 63.8 12 5.2 No 72 0.09 No 0 0 No -30 0.49 No 20 62.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68792934 + NM_004360 CDH1 0 . . . 5.61 77.96 19 5.33 No 58 1.23 Yes 0 0 No -30 0.23 No 54 69.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68386222 + NM_133509 RAD51B 0 . . . 2.49 77.4 22 6.86 Yes 3 1.61 Yes 0 0 No -21 0.97 Yes 49 55.7 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69041835 + NM_133509 RAD51B 0 . . . 9.52 91.06 12 5.23 No 63 1.31 Yes 0 0 No -26 0.61 No 38 56.61 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68463821 + NM_133509 RAD51B 0 . . . 1.1 0 27 4.61 No 75 -6.3 No 0 0 No -25 0.61 No 51 91.05 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 33438093 - NM_002878 RAD51D 0 . . . 7.21 89.03 12 5.2 No 9 1.1 Yes 0 0 No -28 0.41 No 49 85.06 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68493624 + NM_133509 RAD51B 0 . . . 2.04 72.07 34 5 No 25 0.67 No 0 0 No -26 0.8 Yes 41 61.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68502305 + NM_133509 RAD51B 0 . . . 1.65 68.45 36 4.36 No 40 0.77 No 0 0 No -35 0.32 No 48 87.17 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47637683 + NM_000251 MSH2 0 . . . 0.77 63.49 17 4.12 No 40 -4.08 No 0 0 No -28 0.71 Yes 38 90.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68865026 + NM_004360 CDH1 0 . . . 3.89 84.17 33 6.22 Yes 66 1.17 Yes 0 0 No -32 0.37 No 9 40.32 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59814594 - NM_032043 BRIP1 0 . . . 2.29 74.11 20 4.47 No 6 0.39 No 0 0 No -19 0.72 Yes 44 55.24 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68950817 + NM_133509 RAD51B 0 . . . 7.7 94.43 17 4.74 No 57 0.67 No 0 0 No -54 0.28 No 53 55.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69134960 + NM_133509 RAD51B 0 . . . 1.9 82.71 15 5.1 No 76 0.84 Yes 0 0 No -42 0.38 No 44 59.39 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 152349216 - NM_005431 XRCC2 0 . . . 7.97 67.59 21 4.69 No 59 0.84 Yes 0 0 No -20 0.57 No 12 28.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68859907 + NM_004360 CDH1 0 . . . 9.13 86.62 12 5.39 No 10 0.94 Yes 0 0 No -19 0.71 Yes 48 91.53 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68490307 + NM_133509 RAD51B 0 . . . 7.76 74.97 36 6.55 Yes 23 1.65 Yes 0 0 No -28 0.89 Yes 45 80.66 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190695037 + NM_000534 PMS1 0 . . . 8.21 88.38 58 7.33 Yes 45 2.36 Yes 0 0 No -31 0.87 Yes 40 70.15 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68295088 + NM_133509 RAD51B 0 . . . 4.16 68.95 27 5.34 No 51 1.02 Yes 0 0 No -26 0.79 Yes 28 92.72 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68537506 + NM_133509 RAD51B 0 . . . 5.69 66.11 18 4.69 No 65 1.43 Yes 0 0 No -17 0.66 No 39 82.35 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131910071 + NM_005732 RAD50 0 . . . 6.79 79.98 27 5.2 No 68 -1.06 No 0 0 No -26 0.56 No 47 78.48 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68350458 + NM_133509 RAD51B 0 . . . 6.7 87.38 28 5.19 No 60 1.39 Yes 0 0 No -50 0.34 No 41 50.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190672548 + NM_000534 PMS1 0 . . . 5.05 83.27 18 4.81 No 25 0.56 No 0 0 No -18 0.35 No 48 50.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68337234 + NM_133509 RAD51B 0 . . . 2.63 64.16 21 4.98 No 9 1.11 Yes 0 0 No -20 0.92 Yes 49 50.51 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68912050 + NM_133509 RAD51B 0 . . . 1.51 69.84 20 4.48 No 44 0.55 No 0 0 No -30 0.45 No 47 84.61 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32897310 + NM_000059 BRCA2 0 . . . 2.32 84.41 16 4.69 No 28 1.26 Yes 0 0 No -22 0.51 No 46 65.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68445767 + NM_133509 RAD51B 0 . . . 2.47 81.24 18 5.02 No 0 1.03 Yes 0 0 No -46 0.79 Yes 43 77.08 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59925419 - NM_032043 BRIP1 0 . . . 9.4 87.25 27 4.52 No 4 1.16 Yes 0 0 No -26 0.85 Yes 44 94.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68592365 + NM_133509 RAD51B 0 . . . 3.36 71.14 20 5.06 No -1 0.06 No 0 0 No -25 0.5 No 36 41.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68933690 + NM_133509 RAD51B 0 . . . 1.95 73.38 49 7.75 Yes 50 0.93 Yes 0 0 No -24 0.77 Yes 46 83.68 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190698743 + NM_000534 PMS1 0 . . . 4.81 76.31 17 6.42 Yes 11 0.4 No 0 0 No -37 0.7 Yes 47 80.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68861412 + NM_133509 RAD51B 0 . . . 3.8 85.92 22 5.89 Yes 45 0.59 No 0 0 No -21 0.68 Yes 49 50.36 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37043098 + NM_000249 MLH1 0 . . . 2.5 82.93 30 3.74 No 37 0.25 No 0 0 No -27 0.65 No 35 60 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68829658 + NM_133509 RAD51B 0 . . . 1.6 76.29 20 5.1 No 26 1.35 Yes 0 0 No -19 0.6 No 21 78.1 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68519719 + NM_133509 RAD51B 0 . . . 4.41 72.01 41 7.55 Yes 27 0.77 No 0 0 No -40 0.72 Yes 45 59.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89729588 + NM_000314 PTEN 0 . . . 6.63 92.89 40 6.21 Yes 22 1.66 Yes 0 0 No -26 0.42 No 36 94.53 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68972386 + NM_133509 RAD51B 0 . . . 0.28 80.91 25 5.56 Yes 33 1.21 Yes 0 0 No -24 0.9 Yes 25 72.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1207670 + NM_000455 STK11 0 . . . 6.09 86.46 41 5.52 No 6 0.4 No 0 0 No -30 0.74 Yes 52 58.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68981459 + NM_133509 RAD51B 0 . . . 0.41 0 14 4.9 No 76 -3.7 No 0 0 No -26 0.51 No 53 62.38 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52436754 - NM_004656 BAP1 0 . . . 0.84 75.96 32 5.57 Yes 5 1.47 Yes 0 0 No -31 0.87 Yes 53 66.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32912314 + NM_000059 BRCA2 0 . . . 6.67 74.74 27 4.93 No 11 0.51 No 0 0 No -27 0.92 Yes 44 77.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 23646049 - NM_024675 PALB2 0 . . . 1.61 77.18 22 4.31 No 75 0.53 No 0 0 No -21 0.53 No 54 66.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40996021 + NM_001164269 RAD51 0 . . . 5.64 74.53 14 4.12 No 22 1.13 Yes 0 0 No -35 0.58 No 32 93.19 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69000889 + NM_133509 RAD51B 0 . . . 0.39 62.85 22 6.73 Yes 71 -5.76 No 0 0 No -21 0.95 Yes 55 59.5 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68918007 + NM_133509 RAD51B 0 . . . 6.51 79.59 13 4.9 No 30 0.19 No 0 0 No -17 0.53 No 45 80.86 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131896929 + NM_005732 RAD50 0 . . . 2.42 78.96 48 7.82 Yes 72 1.12 Yes 0 0 No -21 0.67 Yes 27 51.86 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 190692054 + NM_000534 PMS1 0 . . . 1.66 64.31 21 3.53 No 70 1.06 Yes 0 0 No -20 0.82 Yes 14 35.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68501151 + NM_133509 RAD51B 0 . . . 2.71 68.26 59 8.1 Yes 52 0.48 No 0 0 No -27 0.59 No 48 74.73 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131930675 + NM_005732 RAD50 0 . . . 0.04 0 25 5 No 5 0.72 No 0 0 No -24 0.89 Yes 38 37.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45798323 - NM_001048171 MUTYH 0 . . . 0.46 73.59 25 5.58 Yes 44 0.27 No 0 0 No -27 0.63 No 47 23.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68365757 + NM_133509 RAD51B 0 . . . 6.93 76.41 28 5.67 Yes 54 1.08 Yes 0 0 No -27 0.91 Yes 37 42.91 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215612201 - NM_000465 BARD1 0 . . . 4.03 90.18 18 4.47 No 49 1.01 Yes 0 0 No -47 0.67 Yes 46 64.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32914973 + NM_000059 BRCA2 0 . . . 1.6 66.56 25 5 No 33 0.54 No 0 0 No -24 0.89 Yes 33 58.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68820294 + NM_133509 RAD51B 0 . . . 0.16 64.62 32 7.27 Yes 34 -2.59 No 0 0 No -31 0.78 Yes 51 31.72 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23624505 - NM_024675 PALB2 0 . . . 1.9 66.25 16 4.13 No 64 -5.92 No 0 0 No -19 0.79 Yes 43 67.96 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41250076 - NM_007294 BRCA1 0 . . . 1.67 66.07 28 5.57 Yes 65 -4.77 No 0 0 No -27 0.95 Yes 41 65.49 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68422895 + NM_133509 RAD51B 0 . . . 4.61 87.64 12 4.84 No 67 -3.05 No 0 0 No -10 0.5 No 49 72.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190684960 + NM_000534 PMS1 0 . . . 1.71 67.32 13 4.36 No 15 0.71 No 0 0 No -46 0.17 No 43 82.25 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68691923 + NM_133509 RAD51B 0 . . . 6.02 82.95 32 5.59 Yes 0 0.81 Yes 0 0 No -22 0.34 No 50 86.41 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68771314 + NM_133509 RAD51B 0 . . . 1.91 72.85 22 4.9 No 35 0.06 No 0 0 No -21 0.93 Yes 40 82.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68631564 + NM_133509 RAD51B 0 . . . 0.66 70.98 26 5.32 No 19 0.19 No 0 0 No -25 0.62 No 48 60.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68623666 + NM_133509 RAD51B 0 . . . 2.02 67.1 55 8.48 Yes 24 0.41 No 0 0 No -28 0.47 No 54 57.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215652260 - NM_000465 BARD1 0 . . . 1.37 61 31 7.81 Yes 19 0.36 No 0 0 No -24 0.7 Yes 49 74.54 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69009620 + NM_133509 RAD51B 0 . . . 4.13 77.25 12 4.69 No 37 1.31 Yes 0 0 No -25 0.39 No 40 83.95 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32895945 + NM_000059 BRCA2 0 . . . 6.72 87.26 27 5.23 No 56 1.23 Yes 0 0 No -26 0.76 Yes 40 67.37 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68489538 + NM_133509 RAD51B 0 . . . 2.76 70.36 36 7.19 Yes 15 1.97 Yes 0 0 No -22 0.57 No 43 80.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68497305 + NM_133509 RAD51B 0 . . . 3.53 75.81 22 5.65 Yes 55 1.72 Yes 0 0 No -25 0.61 No 51 77.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41199655 - NM_007294 BRCA1 0 . . . 3.24 70.26 34 7.49 Yes NA NA NA 0 0 No -37 0.51 No 43 27.23 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59922163 - NM_032043 BRIP1 0 . . . 1.11 72.5 23 4.83 No 61 -5.52 No 0 0 No -25 0.83 Yes 48 41.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69009312 + NM_133509 RAD51B 0 . . . 0.57 67.19 12 5.39 No 1 0.34 No 0 0 No -26 0.61 No 42 30.46 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68365952 + NM_133509 RAD51B 0 . . . 3.61 79.69 22 6.16 Yes 15 1.43 Yes 0 0 No -60 0.58 No 43 95.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152364246 - NM_005431 XRCC2 0 . . . 1.44 64.91 16 4.69 No 14 0.72 No 0 0 No -36 0.65 No 39 84.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68640482 + NM_133509 RAD51B 0 . . . 1.45 75.42 12 5.77 Yes 69 -1.58 No 0 0 No -20 0.32 No 24 69.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23637628 - NM_024675 PALB2 0 . . . 1.59 64.69 23 4.74 No 1 0.01 No 0 0 No -22 0.46 No 39 58.52 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59769120 - NM_032043 BRIP1 0 . . . 5.01 65.68 25 6.82 Yes 37 0.57 No 0 0 No -24 0.49 No 21 75.42 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68838778 + NM_004360 CDH1 0 . . . 4.71 84.17 32 5.65 Yes 47 1.1 Yes 0 0 No -28 0.61 No 11 73.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37039027 + NM_000249 MLH1 0 . . . 4.36 78.6 28 4.97 No 48 -4.2 No 0 0 No -19 0.38 No 53 78.94 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 40993852 + NM_001164269 RAD51 0 . . . 1.09 0 20 4.19 No 69 1.24 Yes 0 0 No -54 0.57 No 28 46.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108219547 + NM_000051 ATM 0 . . . 2.85 73.66 19 4.79 No 71 -2.7 No 0 0 No -27 0.71 Yes 30 24.57 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89730787 + NM_000314 PTEN 0 . . . 4.43 77.94 16 5.92 Yes 61 1.18 Yes 0 0 No -25 0.73 Yes 43 92.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47684086 + NM_000251 MSH2 0 . . . 1.47 0 18 5.44 No -3 0.68 No 0 0 No -32 0.52 No 47 32.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37086357 + NM_000249 MLH1 0 . . . 3.42 0 10 4.96 No 71 -0.83 No 0 0 No -26 0.66 No 48 53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69021590 + NM_133509 RAD51B 0 . . . 4.01 84.41 23 5.29 No 12 0.07 No 0 0 No -22 0.85 Yes 46 78.34 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47665771 + NM_000251 MSH2 0 . . . 2.78 76.31 24 4.85 No 72 0.84 Yes 0 0 No -23 0.75 Yes 40 61.03 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47757606 + NM_000251 MSH2 0 . . . 0.62 64.99 20 6.93 Yes 3 0.28 No 0 0 No -19 0.52 No 48 43.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90967429 - NM_002485 NBN 0 . . . 2.98 72.75 15 4.58 No 56 1.1 Yes 0 0 No -56 0.39 No 41 46.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108134647 + NM_000051 ATM 0 . . . 2.96 72.54 18 4.63 No 43 -2.23 No 0 0 No -21 0.93 Yes 51 58.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32935060 + NM_000059 BRCA2 0 . . . 1.25 82.14 17 5.28 No 67 -4.97 No 0 0 No -20 0.79 Yes 51 36.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68829583 + NM_004360 CDH1 0 . . . 3.96 78.97 18 4.8 No 8 1.19 Yes 0 0 No -21 0.6 No 50 81.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 104164015 - NM_001100119 XRCC3 0 . . . 6.72 74.06 32 6 Yes 33 1.9 Yes 0 0 No -31 0.88 Yes 25 61.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215622643 - NM_000465 BARD1 0 . . . 3.43 62.07 47 8.78 Yes 36 2.19 Yes 0 0 No -46 0.78 Yes 22 92.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48020386 + NM_000179 MSH6 0 . . . 0.25 75.06 26 5 No 62 -5.15 No 0 0 No -25 0.87 Yes 45 27.2 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23652379 - NM_024675 PALB2 0 . . . 6.75 85.13 26 5.39 No 3 2.32 Yes 0 0 No -25 0.96 Yes 49 47.15 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68311081 + NM_133509 RAD51B 0 . . . 1.43 0 27 5.29 No 37 0.7 No 0 0 No -21 0.63 No 20 49.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68991780 + NM_133509 RAD51B 0 . . . 0.49 66.04 17 4.8 No 63 -4.44 No 0 0 No -24 0.95 Yes 50 93.86 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68557252 + NM_133509 RAD51B 0 . . . 3.55 80.99 29 5.6 Yes 73 0.76 No 0 0 No -28 0.83 Yes 44 92.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68788548 + NM_133509 RAD51B 0 . . . 2.81 76.09 31 4.22 No 67 1.04 Yes 0 0 No -30 0.61 No 44 51.97 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131948400 + NM_005732 RAD50 0 . . . 3.01 68.19 32 5.35 No 16 -2.18 No 0 0 No -28 0.38 No 53 69.57 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32952176 + NM_000059 BRCA2 0 . . . 4.35 89.06 29 5.71 Yes 14 -3.14 No 0 0 No -28 0.53 No 45 56.58 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68924665 + NM_133509 RAD51B 0 . . . 0.54 56.03 20 6.21 Yes 72 -4.81 No 0 0 No -19 0.62 No 47 78.55 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131950898 + NM_005732 RAD50 0 . . . 3.19 67.55 28 5.77 Yes 11 1.24 Yes 0 0 No -27 0.68 Yes 47 72.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215647033 - NM_000465 BARD1 0 . . . 1.49 61.73 15 4 No 23 1.25 Yes 0 0 No -34 0.53 No 56 33.1 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190712093 + NM_000534 PMS1 0 . . . 3.88 75.68 33 8.33 Yes 25 0.74 No 0 0 No -36 0.39 No 24 49.79 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190719023 + NM_000534 PMS1 0 . . . 1.06 58.96 23 4.92 No 71 1.81 Yes 0 0 No -22 0.95 Yes 41 72.86 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59911931 - NM_032043 BRIP1 0 . . . 2.97 76.76 22 3.26 No 6 0.41 No 0 0 No -21 0.7 Yes 52 31.51 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23622059 - NM_024675 PALB2 0 . . . 0.88 74.13 54 9.11 Yes 75 1.26 Yes 0 0 No -27 0.35 No 64 49.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29100949 - NM_001005735 CHEK2 0 . . . 0.4 73.95 34 4.51 No 22 1.84 Yes 0 0 No -33 0.69 Yes 36 68.88 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32921010 + NM_000059 BRCA2 0 . . . 0.33 79.85 26 5.57 Yes 47 0.56 No 0 0 No -25 0.5 No 49 83.08 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59904695 - NM_032043 BRIP1 0 . . . 4.91 90.11 15 4.63 No 52 0.51 No 0 0 No -31 0.68 Yes 49 89.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69062612 + NM_133509 RAD51B 0 . . . 2.44 61.51 10 4.69 No 76 -5.65 No 0 0 No -34 0.19 No 39 80.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68997597 + NM_133509 RAD51B 0 . . . 1.37 61.47 15 3.74 No 65 -5.82 No 0 0 No -27 0.62 No 48 53.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68458173 + NM_133509 RAD51B 0 . . . 0.6 67.97 30 5.75 Yes 61 1.75 Yes 0 0 No -30 0.48 No 64 22.47 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68541708 + NM_133509 RAD51B 0 . . . 1.49 77.07 26 5.58 Yes 40 0.29 No 0 0 No -40 0.49 No 50 44.46 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 37077167 + NM_000249 MLH1 0 . . . 2.77 73.92 18 4.9 No 52 2.26 Yes 0 0 No -17 0.76 Yes 50 51.25 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105207299 + NM_021930 RINT1 0 . . . 2.48 72.89 15 4.58 No 76 1.65 Yes 0 0 No -23 0.68 Yes 53 56.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68578446 + NM_133509 RAD51B 0 . . . 0.75 78.07 24 6.07 Yes 61 0.92 Yes 0 0 No -23 0.52 No 18 42.25 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68825421 + NM_133509 RAD51B 0 . . . 7.13 67.49 23 5.66 Yes 22 -2.67 No 0 0 No -22 0.83 Yes 19 39.94 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68559914 + NM_133509 RAD51B 0 . . . 3.25 80.31 12 4.24 No 32 1.12 Yes 0 0 No -23 0.49 No 26 88.37 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68827052 + NM_133509 RAD51B 0 . . . 1.41 68.01 23 4.79 No 9 0.76 No 0 0 No -22 0.89 Yes 20 35.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190651750 + NM_000534 PMS1 0 . . . 5.81 81.37 27 4.69 No 58 -3.88 No 0 0 No -26 0.66 No 43 65.31 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90977984 - NM_002485 NBN 0 . . . 0.36 74.68 14 4.32 No 17 0.43 No 0 0 No -14 0.4 No 41 53.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68466406 + NM_133509 RAD51B 0 . . . 2.65 78.6 34 4.83 No 74 1.33 Yes 0 0 No -25 0.77 Yes 49 47.96 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1230375 + NM_000455 STK11 0 . . . 3.55 74.05 12 5.35 No 43 0.95 Yes 0 0 No -25 0.42 No 42 70.76 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59766320 - NM_032043 BRIP1 0 . . . 2.58 70.72 23 5.77 Yes 11 1.5 Yes 0 0 No -29 0.56 No 32 34.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108125733 + NM_000051 ATM 0 . . . 6.38 81.21 28 5.72 Yes 44 1.08 Yes 0 0 No -27 0.91 Yes 46 84.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 23648860 - NM_024675 PALB2 0 . . . 3.71 79.63 13 4.58 No 4 0.94 Yes 0 0 No -22 0.49 No 50 65.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41241233 - NM_007294 BRCA1 0 . . . 2.55 89.55 20 4.8 No 39 1.07 Yes 0 0 No -19 0.86 Yes 47 67.5 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56792005 + NM_058216 RAD51C 0 . . . 2.83 79.69 13 5.1 No 8 1.2 Yes 0 0 No -22 0.41 No 50 89.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68806957 + NM_004360 CDH1 0 . . . 0.8 73.41 19 4.04 No 65 -4.31 No 0 0 No -24 0.71 Yes 34 36.98 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68888644 + NM_133509 RAD51B 0 . . . 5.24 79.73 12 5.66 Yes 59 -1.12 No 0 0 No -25 0.33 No 52 64.16 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56794671 + NM_058216 RAD51C 0 . . . 3.3 70.86 24 5.99 Yes 46 -3.65 No 0 0 No -23 0.69 Yes 45 54.44 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59885588 - NM_032043 BRIP1 0 . . . 4.88 77.46 27 5.65 Yes 1 0.42 No 0 0 No -26 0.48 No 43 64.1 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215598913 - NM_000465 BARD1 0 . . . 2.28 80.05 25 3.63 No 73 0.29 No 0 0 No -24 0.47 No 43 91.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68456899 + NM_133509 RAD51B 0 . . . 1.47 74.96 18 4.37 No 7 0.7 No 0 0 No -44 0.54 No 51 71.1 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr19 1208069 + NM_000455 STK11 0 . . . 5.01 84.73 16 3.82 No 56 -0.69 No 0 0 No -28 0.51 No 50 66.34 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68992022 + NM_133509 RAD51B 0 . . . 4.71 77.45 10 5.57 Yes -4 -0.74 No 0 0 No -24 0.36 No 63 32.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32925983 + NM_000059 BRCA2 0 . . . 2.86 84 20 3.91 No 2 1.5 Yes 0 0 No -39 0.19 No 44 41.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108179553 + NM_000051 ATM 0 . . . 4.19 90.13 28 5.38 No 34 0.61 No 0 0 No -27 0.6 No 46 36.69 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23648925 - NM_024675 PALB2 0 . . . 1.01 83.85 16 4.53 No 33 0.74 No 0 0 No -19 0.82 Yes 50 84.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68303157 + NM_133509 RAD51B 0 . . . 1.32 69.88 24 5.29 No 54 0.8 Yes 0 0 No -21 0.7 Yes 33 71.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152348963 - NM_005431 XRCC2 0 . . . 0.37 0 31 5.49 No 55 0.81 Yes 0 0 No -28 0.77 Yes 58 46.9 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68386733 + NM_133509 RAD51B 0 . . . 4.57 78.83 22 3.71 No 12 0.13 No 0 0 No -22 0.46 No 46 47.77 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215647671 - NM_000465 BARD1 0 . . . 6.4 79.97 20 4.9 No -3 0.83 Yes 0 0 No -19 0.33 No 49 69.06 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190648698 + NM_000534 PMS1 0 . . . 0.11 0 25 6.96 Yes 16 0.34 No 0 0 No -24 0.62 No 47 30.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89731402 + NM_000314 PTEN 0 . . . 3.61 80.74 20 4.9 No 76 0.55 No 0 0 No -17 0.55 No 47 62.03 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29134670 - NM_001005735 CHEK2 0 . . . 5.94 83.42 17 4.8 No 64 0.47 No 0 0 No -24 0.81 Yes 47 54.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89726698 + NM_000314 PTEN 0 . . . 7.07 80.87 29 5.31 No 49 0.57 No 0 0 No -28 0.78 Yes 27 65.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 48018549 + NM_000179 MSH6 0 . . . 8.32 76.3 16 4.58 No 9 1.12 Yes 0 0 No -23 0.84 Yes 35 37.95 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47706477 + NM_000251 MSH2 0 . . . 1.92 61.54 45 7.1 Yes 49 1.4 Yes 0 0 No -24 0.65 No 13 76.29 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94177232 - NM_005591 MRE11 0 . . . 0.36 67.92 17 4.2 No 27 0.32 No 0 0 No -16 0.36 No 49 49.13 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84381659 - NM_139076 FAM175A 0 . . . 5.62 78.15 11 5 No 4 1.08 Yes 0 0 No -18 0.39 No 44 77.13 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59797059 - NM_032043 BRIP1 0 . . . 3.67 84 27 5.74 Yes 33 1.89 Yes 0 0 No -26 0.9 Yes 25 84.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69080757 + NM_133509 RAD51B 0 . . . 7 89.16 35 5.92 Yes 16 1.32 Yes 0 0 No -29 0.33 No 42 88.08 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68455633 + NM_133509 RAD51B 0 . . . 2.59 77.46 19 4.55 No 26 0.63 No 0 0 No -29 0.26 No 37 62.75 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108124441 + NM_000051 ATM 0 . . . 2.76 69.38 47 7.76 Yes 68 -5.64 No 0 0 No -30 0.87 Yes 46 57.01 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68485082 + NM_133509 RAD51B 0 . . . 2.78 65.91 19 4.16 No 47 0.89 Yes 0 0 No -29 0.87 Yes 50 39.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75485244 - NM_001040108 MLH3 0 . . . 7.45 78 29 5.32 No 13 0.97 Yes 0 0 No -26 0.38 No 35 82.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89656853 + NM_000314 PTEN 0 . . . 5.42 90.14 28 4.26 No 3 1.53 Yes 0 0 No -27 0.78 Yes 17 93.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59778853 - NM_032043 BRIP1 0 . . . 2.27 84.74 22 5.29 No 52 1.25 Yes 0 0 No -50 0.47 No 50 41.52 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47664791 + NM_000251 MSH2 0 . . . 1.83 76.63 57 6.62 Yes 48 0.44 No 0 0 No -26 0.65 No 52 51.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108175990 + NM_000051 ATM 0 . . . 6.68 91.22 17 4.69 No -2 0.09 No 0 0 No -38 0.62 No 49 81.87 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59898486 - NM_032043 BRIP1 0 . . . 2.05 64.92 25 5.29 No 14 1.04 Yes 0 0 No -24 0.66 No 44 83.17 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1213179 + NM_000455 STK11 0 . . . 5.12 85.02 18 4.36 No 6 1.26 Yes 0 0 No -17 0.93 Yes 52 87.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 41244513 - NM_007294 BRCA1 0 . . . 0.42 67.06 43 6.99 Yes 53 -5.27 No 0 0 No -20 0.69 Yes 45 38.48 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68315217 + NM_133509 RAD51B 0 . . . 0.72 74.17 26 3.66 No 41 0.5 No 0 0 No -25 0.74 Yes 48 52.27 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37057021 + NM_000249 MLH1 0 . . . 3.67 84.49 84 9.19 Yes 2 1.37 Yes 0 0 No -24 0.55 No 36 51.67 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23620976 - NM_024675 PALB2 0 . . . 0.33 61.05 20 6.92 Yes 55 1.18 Yes 0 0 No -19 0.45 No 42 48.41 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69111392 + NM_133509 RAD51B 0 . . . 11.26 84.9 22 5.29 No 61 1.05 Yes 0 0 No -21 0.74 Yes 37 48.64 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94175309 - NM_005591 MRE11 0 . . . 8.21 91.12 26 2.77 No 39 1.45 Yes 0 0 No -26 0.5 No 53 82.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 41211457 - NM_007294 BRCA1 0 . . . 1.26 0 11 6.63 Yes 17 1.01 Yes 0 0 No -34 0.74 Yes 41 85.83 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68337132 + NM_133509 RAD51B 0 . . . 4.37 78.79 13 4.12 No 57 -4.42 No 0 0 No -31 0.89 Yes 39 83.19 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32959295 + NM_000059 BRCA2 0 . . . 1.5 73.96 16 4.69 No 56 -4.63 No 0 0 No -60 0.54 No 53 34.7 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68817276 + NM_004360 CDH1 0 . . . 1.9 0 20 5.14 No 72 -5.28 No 0 0 No -19 0.68 Yes 43 76.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68381150 + NM_133509 RAD51B 0 . . . 1.05 61.25 30 4.58 No 52 1.74 Yes 0 0 No -29 0.39 No 47 73.39 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68392009 + NM_133509 RAD51B 0 . . . 0.93 83.95 21 5.02 No 11 0.6 No 0 0 No -20 0.53 No 47 88.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190650737 + NM_000534 PMS1 0 . . . 2.37 79.83 45 6.65 Yes 53 0.65 No 0 0 No -25 0.57 No 49 55.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47656820 + NM_000251 MSH2 0 . . . 1.52 66.84 34 6.43 Yes -2 0.18 No 0 0 No -33 0.73 Yes 49 45.59 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105197674 + NM_021930 RINT1 0 . . . 0.41 58.43 17 5.17 No 39 -4.86 No 0 0 No -23 0.54 No 33 80.26 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68796016 + NM_004360 CDH1 0 . . . 4.92 84.57 17 4.03 No 49 -1.69 No 0 0 No -26 0.63 No 48 57.2 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69073091 + NM_133509 RAD51B 0 . . . 3.44 80.3 16 5.99 Yes 70 -2.07 No 0 0 No -31 0.4 No 50 44.77 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89676501 + NM_000314 PTEN 0 . . . 9.65 76.33 23 6.07 Yes 13 1.62 Yes 0 0 No -23 0.84 Yes 41 77.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr22 29123167 - NM_001005735 CHEK2 0 . . . 3.42 65.89 31 5.51 No 56 1.02 Yes 0 0 No -26 0.54 No 42 56.87 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48008533 + NM_000179 MSH6 0 . . . 4.69 69.08 38 8.25 Yes 7 0.49 No 0 0 No -37 0.42 No 37 68.67 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108168143 + NM_000051 ATM 0 . . . 4.05 71.95 23 5.71 Yes -3 0.28 No 0 0 No -27 0.73 Yes 45 85.7 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59848683 - NM_032043 BRIP1 0 . . . 7.63 84.76 19 4.08 No 12 0.82 Yes 0 0 No -18 0.82 Yes 46 68.26 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23621015 - NM_024675 PALB2 0 . . . 1.89 67.4 18 5.54 No 16 1.19 Yes 0 0 No -26 0.77 Yes 42 85.87 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59904388 - NM_032043 BRIP1 0 . . . 0.38 63.85 22 4.78 No 63 0.77 No 0 0 No -29 0.56 No 47 52.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68611278 + NM_133509 RAD51B 0 . . . 2.16 69.8 50 7.13 Yes 38 0.98 Yes 0 0 No -25 0.8 Yes 20 49.01 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47764490 + NM_000251 MSH2 0 . . . 4.97 84.41 32 6.16 Yes 13 0.97 Yes 0 0 No -59 0.87 Yes 45 76.01 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48009578 + NM_000179 MSH6 0 . . . 0.63 69.93 21 4.92 No 75 0.83 Yes 0 0 No -45 0.42 No 51 49.4 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89676105 + NM_000314 PTEN 0 . . . 2.9 76.31 25 5.92 Yes 53 1.21 Yes 0 0 No -24 0.87 Yes 45 57.36 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr8 90988878 - NM_002485 NBN 0 . . . 2.35 73.6 15 5.29 No 52 -4.32 No 0 0 No -23 0.51 No 45 48.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69064045 + NM_133509 RAD51B 0 . . . 4.76 77.09 13 5.29 No 22 1.11 Yes 0 0 No -21 0.53 No 45 73.9 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59865342 - NM_032043 BRIP1 0 . . . 1.01 0 30 4.22 No 63 2.54 Yes 0 0 No -21 0.39 No 14 79.03 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131945354 + NM_005732 RAD50 0 . . . 1.97 63.69 16 5.97 Yes 47 0.54 No 0 0 No -24 0.38 No 42 27.15 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68785271 + NM_004360 CDH1 0 . . . 8.14 90.63 16 4.56 No 52 0.69 No 0 0 No -15 0.46 No 41 74.59 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90982013 - NM_002485 NBN 0 . . . 2.24 80.12 23 5.37 No 7 1.02 Yes 0 0 No -22 0.84 Yes 51 82.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68308017 + NM_133509 RAD51B 0 . . . 5.01 74.99 33 6.21 Yes 42 1.03 Yes 0 0 No -35 0.63 No 36 85.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131975021 + NM_005732 RAD50 0 . . . 0.03 0 26 5.1 No 63 -4.2 No 0 0 No -26 0.84 Yes 38 41.11 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94163481 - NM_005591 MRE11 0 . . . 0.99 79.59 33 6.32 Yes 42 -3.79 No 0 0 No -25 0.45 No 43 56.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59902032 - NM_032043 BRIP1 0 . . . 7.19 86.51 28 7.64 Yes 54 0.6 No 0 0 No -25 0.79 Yes 46 77.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr8 90973716 - NM_002485 NBN 0 . . . 2.54 68.26 29 5.78 Yes 58 1.77 Yes 0 0 No -27 0.43 No 42 60.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94194554 - NM_005591 MRE11 0 . . . 0.68 0 13 5.58 Yes 12 0.64 No 0 0 No -20 0.49 No 43 68.28 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68431229 + NM_133509 RAD51B 0 . . . 5.79 79.61 31 6.23 Yes 21 0.87 Yes 0 0 No -25 0.88 Yes 45 80.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190677645 + NM_000534 PMS1 0 . . . 6.6 85.06 28 5.81 Yes 46 -3.07 No 0 0 No -27 0.83 Yes 44 48.78 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68515305 + NM_133509 RAD51B 0 . . . 0.87 66.74 19 4.42 No -3 0.87 Yes 0 0 No -21 0.54 No 37 52.53 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108239705 + NM_000051 ATM 0 . . . 2.66 67.81 26 6.75 Yes 42 -3.48 No 0 0 No -25 0.77 Yes 46 60.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47745868 + NM_000251 MSH2 0 . . . 4.66 77.7 14 5.1 No 3 0.04 No 0 0 No -25 0.4 No 50 57.95 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr9 21989415 - NM_000077 CDKN2A 0 . . . 10.11 90.15 15 5.83 Yes 24 1.49 Yes 0 0 No -19 0.51 No 34 70.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56808247 + NM_058216 RAD51C 0 . . . 8.32 87.45 19 4.8 No 74 0.28 No 0 0 No -35 0.73 Yes 48 79.67 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47686153 + NM_000251 MSH2 0 . . . 4.39 84.5 28 8.39 Yes 76 1.17 Yes 0 0 No -24 0.71 Yes 56 38.32 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68782141 + NM_004360 CDH1 0 . . . 1.95 0 26 5.32 No 40 1.42 Yes 0 0 No -25 0.5 No 43 53.76 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47781995 + NM_000251 MSH2 0 . . . 0.71 66.95 28 6.21 Yes -4 0.11 No 0 0 No -27 0.87 Yes 47 24.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59773819 - NM_032043 BRIP1 0 . . . 3.14 77.33 15 5.26 No 52 1.03 Yes 0 0 No -32 0.39 No 47 90.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68355756 + NM_133509 RAD51B 0 . . . 1.75 78.73 18 5.22 No 28 1.91 Yes 0 0 No -26 0.68 Yes 50 73.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr3 37088280 + NM_000249 MLH1 0 . . . 5.2 85.02 22 5.29 No 72 1.17 Yes 0 0 No -22 0.3 No 53 82.15 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69067530 + NM_133509 RAD51B 0 . . . 3.05 75.96 23 5.19 No 44 0.95 Yes 0 0 No -22 0.57 No 49 66.71 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215632050 - NM_000465 BARD1 0 . . . 2.85 67.05 42 6.44 Yes 52 0.76 No 0 0 No -19 0.58 No 43 63.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69079386 + NM_133509 RAD51B 0 . . . 3.76 83.01 20 4.57 No 22 0.81 Yes 0 0 No -23 0.43 No 51 56.74 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89630278 + NM_000314 PTEN 0 . . . 5.86 76.28 14 5 No 18 0.39 No 0 0 No -19 0.82 Yes 40 64.76 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68899680 + NM_133509 RAD51B 0 . . . 1.26 67.52 21 5.2 No 20 -3.44 No 0 0 No -20 0.82 Yes 56 83.53 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68637487 + NM_133509 RAD51B 0 . . . 5.53 71.81 16 5.44 No -2 0.32 No 0 0 No -24 0.75 Yes 45 66.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41269847 - NM_007294 BRCA1 0 . . . 2.19 76.6 36 6.8 Yes 51 -4.47 No 0 0 No -34 0.68 Yes 42 65.12 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68803077 + NM_004360 CDH1 0 . . . 1.09 67.36 22 7 Yes 75 0.81 Yes 0 0 No -26 0.73 Yes 21 73.67 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108199841 + NM_000051 ATM 0 . . . 3.09 0 48 6.6 Yes 5 0.39 No 0 0 No -48 0.48 No 53 75.97 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59920434 - NM_032043 BRIP1 0 . . . 9.78 92.41 29 5.56 Yes 22 1.42 Yes 0 0 No -28 0.76 Yes 36 72.84 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68408816 + NM_133509 RAD51B 0 . . . 3.66 73.34 22 5.29 No 73 0.04 No 0 0 No -27 0.6 No 35 74.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68953915 + NM_133509 RAD51B 0 . . . 0.75 75.46 17 5.83 Yes 69 -2.39 No 0 0 No -31 0.39 No 22 29.18 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29138822 - NM_001005735 CHEK2 0 . . . 9.5 91.31 20 5.1 No 1 1.39 Yes 0 0 No -25 0.67 Yes 32 69.91 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89645768 + NM_000314 PTEN 0 . . . 1.07 66.78 31 5.82 Yes 15 0.56 No 0 0 No -35 0.65 No 43 53.44 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215620607 - NM_000465 BARD1 0 . . . 4.81 63.58 21 5.55 No 58 -3.86 No 0 0 No -26 0.68 Yes 38 61.7 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68794890 + NM_133509 RAD51B 0 . . . 1.31 76.48 26 3.74 No 42 -4.08 No 0 0 No -26 0.45 No 49 63.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68753018 + NM_133509 RAD51B 0 . . . 6.09 82.71 19 5.17 No 65 0.49 No 0 0 No -38 0.78 Yes 52 38.6 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68497858 + NM_133509 RAD51B 0 . . . 3.3 80.63 35 5.83 Yes 56 -2.63 No 0 0 No -29 0.37 No 40 47.04 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41243828 - NM_007294 BRCA1 0 . . . 3.9 79.77 13 6.68 Yes 6 0.15 No 0 0 No -25 0.59 No 46 50.9 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108188248 + NM_000051 ATM 0 . . . 5.78 84.4 23 4.69 No 55 0.55 No 0 0 No -22 0.82 Yes 45 75.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68552253 + NM_133509 RAD51B 0 . . . 5.5 75.46 51 7.37 Yes 73 -4.46 No 0 0 No -50 0.67 Yes 46 26.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90953164 - NM_002485 NBN 0 . . . 8.88 86.56 17 4.7 No 52 0.85 Yes 0 0 No -27 0.74 Yes 45 89.58 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6040120 - NM_000535 PMS2 0 . . . 2.25 66.13 16 5.2 No 66 0.85 Yes 0 0 No -21 0.76 Yes 49 43.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59798512 - NM_032043 BRIP1 0 . . . 7.71 81.29 35 5.91 Yes 67 1.36 Yes 0 0 No -32 0.52 No 46 65.51 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68774291 + NM_004360 CDH1 0 . . . 1.51 79.26 20 4.47 No 35 1.01 Yes 0 0 No -19 0.91 Yes 23 82.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr16 68825844 + NM_004360 CDH1 0 . . . 1.86 83 53 5.58 Yes 70 -2.64 No 0 0 No -29 0.56 No 42 77.09 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr22 29098801 - NM_001005735 CHEK2 0 . . . 0.87 74.68 19 5.35 No 52 0.15 No 0 0 No -22 0.86 Yes 46 67 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108168253 + NM_000051 ATM 0 . . . 0.08 0 33 6.08 Yes 66 0.29 No 0 0 No -32 0.86 Yes 44 52.28 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56800485 + NM_058216 RAD51C 0 . . . 1.21 79.92 27 5.2 No 45 0.81 Yes 0 0 No -26 0.66 No 44 61.43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68378805 + NM_133509 RAD51B 0 . . . 2.66 63.66 18 4.87 No 20 -2.93 No 0 0 No -18 0.39 No 21 56.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68852114 + NM_004360 CDH1 0 . . . 2.05 77.69 29 6.2 Yes 67 -5.45 No 0 0 No -26 0.56 No 48 78.1 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 105209080 + NM_021930 RINT1 0 . . . 2.04 75.48 23 5.79 Yes 3 1.02 Yes 0 0 No -22 0.85 Yes 39 64.61 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131897201 + NM_005732 RAD50 0 . . . 3.91 73.52 36 4.92 No 76 1.1 Yes 0 0 No -25 0.59 No 45 73.92 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32903106 + NM_000059 BRCA2 0 . . . 8.25 84.96 31 6 Yes 33 0.83 Yes 0 0 No -34 0.59 No 46 43.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32960591 + NM_000059 BRCA2 0 . . . 9.91 89.5 43 7.87 Yes 15 0.86 Yes 0 0 No -42 0.86 Yes 43 62.48 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69083213 + NM_133509 RAD51B 0 . . . 0.28 0 32 6.16 Yes 14 0.14 No 0 0 No -31 0.65 No 51 44.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105202110 + NM_021930 RINT1 0 . . . 2.91 68.95 24 5.4 No 60 0.74 No 0 0 No -23 0.76 Yes 42 93.74 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32970003 + NM_000059 BRCA2 0 . . . 3.97 74.03 30 6.81 Yes 6 1.28 Yes 0 0 No -29 0.42 No 45 43.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6049756 - NM_000535 PMS2 0 . . . 0.82 62.22 23 5.39 No 59 -2.98 No 0 0 No -22 0.71 Yes 43 59.3 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68560570 + NM_133509 RAD51B 0 . . . 5.81 87.43 35 5.13 No 11 -1.97 No 0 0 No -21 0.5 No 47 82.09 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23619991 - NM_024675 PALB2 0 . . . 3.89 76.01 24 4.81 No 2 1.09 Yes 0 0 No -23 0.8 Yes 37 92.28 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68666389 + NM_133509 RAD51B 0 . . . 10.41 83.84 24 7.05 Yes 31 1.46 Yes 0 0 No -28 0.39 No 45 86.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32904190 + NM_000059 BRCA2 0 . . . 7.26 91.2 28 5.29 No 5 1 Yes 0 0 No -27 0.76 Yes 49 70.14 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190706864 + NM_000534 PMS1 0 . . . 7.18 83.68 12 6.29 Yes 68 1.03 Yes 0 0 No -34 0.36 No 38 72.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68644970 + NM_133509 RAD51B 0 . . . 6.19 91.48 25 5.39 No 58 0.18 No 0 0 No -24 0.89 Yes 50 83.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68785507 + NM_004360 CDH1 0 . . . 2.41 68.95 24 6.85 Yes 59 1.47 Yes 0 0 No -23 0.76 Yes 42 92.74 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59829942 - NM_032043 BRIP1 0 . . . 3.9 85.8 21 4.72 No -1 0.03 No 0 0 No -21 0.46 No 45 88.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41204591 - NM_007294 BRCA1 0 . . . 4.93 72.87 21 5.19 No 25 0.24 No 0 0 No -20 0.59 No 33 47.81 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68572033 + NM_133509 RAD51B 0 . . . 3.62 66.93 21 4.07 No 57 0.77 No 0 0 No -20 0.62 No 45 45.05 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56785364 + NM_058216 RAD51C 0 . . . 3.53 70.05 26 5.65 Yes 1 0.72 No 0 0 No -25 0.47 No 38 81.27 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108137096 + NM_000051 ATM 0 . . . 0.65 78.44 35 7.54 Yes 36 0.52 No 0 0 No -34 0.81 Yes 48 52.14 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94215276 - NM_005591 MRE11 0 . . . 2.33 0 21 4.98 No 34 0.98 Yes 0 0 No -45 0.74 Yes 39 72.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89715473 + NM_000314 PTEN 0 . . . 5.24 91.27 19 6.07 Yes 60 1.01 Yes 0 0 No -24 0.44 No 50 74.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47693191 + NM_000251 MSH2 0 . . . 2.49 74.18 15 4.58 No 45 0.42 No 0 0 No -17 0.44 No 13 36.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68285996 + NM_133509 RAD51B 0 . . . 1.19 74.68 33 5.21 No 67 -5.92 No 0 0 No -26 0.72 Yes 54 55.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68549280 + NM_133509 RAD51B 0 . . . 6.04 85.72 35 7.49 Yes 8 0.33 No 0 0 No -38 0.8 Yes 50 41.38 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68461545 + NM_133509 RAD51B 0 . . . 4.2 74.22 16 6.75 Yes -2 1.31 Yes 0 0 No -15 0.22 No 41 46.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108190740 + NM_000051 ATM 0 . . . 1.82 67.8 43 6.95 Yes 61 0.95 Yes 0 0 No -25 0.64 No 36 72.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68371195 + NM_133509 RAD51B 0 . . . 5.6 78.14 27 5.2 No 22 1.13 Yes 0 0 No -29 0.34 No 45 63.5 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68911952 + NM_133509 RAD51B 0 . . . 3.88 86.43 23 5.2 No 51 -3.39 No 0 0 No -22 0.29 No 54 80.21 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215669211 - NM_000465 BARD1 0 . . . 0.73 0 25 5.38 No 51 -5.05 No 0 0 No -22 0.76 Yes 44 94.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59789037 - NM_032043 BRIP1 0 . . . 1.39 78.21 18 5.65 Yes 32 1.16 Yes 0 0 No -31 0.25 No 26 55.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr4 84402208 - NM_139076 FAM175A 0 . . . 6.5 86.2 44 4.76 No 52 1.47 Yes 0 0 No -23 0.6 No 49 93.46 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69009789 + NM_133509 RAD51B 0 . . . 2.48 81.19 34 6.24 Yes 56 0.86 Yes 0 0 No -33 0.68 Yes 54 57.49 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 69112444 + NM_133509 RAD51B 0 . . . 5.78 78.05 20 5.1 No 63 1.07 Yes 0 0 No -19 0.83 Yes 38 46.58 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68684514 + NM_133509 RAD51B 0 . . . 4.04 86.55 22 3.97 No 10 0.7 No 0 0 No -21 0.72 Yes 48 97.49 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68429800 + NM_133509 RAD51B 0 . . . 3.66 77.44 28 6.35 Yes 37 0.91 Yes 0 0 No -27 0.82 Yes 51 85.32 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89646643 + NM_000314 PTEN 0 . . . 5.13 79.43 13 5.11 No 72 1.23 Yes 0 0 No -20 0.85 Yes 46 94.41 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68442436 + NM_133509 RAD51B 0 . . . 4.36 71.57 48 6.98 Yes 19 0.24 No 0 0 No -30 0.74 Yes 41 90.99 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 190684823 + NM_000534 PMS1 0 . . . 1.11 73.12 16 5.2 No 18 -2.29 No 0 0 No -22 0.67 Yes 47 39.03 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68307026 + NM_133509 RAD51B 0 . . . 6.43 76.26 37 6.08 Yes 45 0.8 Yes 0 0 No -36 0.65 No 25 78.14 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr4 84397348 - NM_139076 FAM175A 0 . . . 3.88 0 31 6.56 Yes 53 1.33 Yes 0 0 No -30 0.91 Yes 38 70.87 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59905612 - NM_032043 BRIP1 0 . . . 1.28 68.74 28 5.83 Yes 15 0.81 Yes 0 0 No -30 0.72 Yes 37 45.74 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68631586 + NM_133509 RAD51B 0 . . . 3.86 87 28 6.4 Yes 1 1.19 Yes 0 0 No -27 0.85 Yes 47 74.02 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68789428 + NM_133509 RAD51B 0 . . . 1.22 69.21 20 4.68 No 33 0.24 No 0 0 No -19 0.89 Yes 49 87.69 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 41226837 - NM_007294 BRCA1 0 . . . 1.87 87 14 5.28 No 33 1.14 Yes 0 0 No -28 0.65 No 25 40.83 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr9 21972525 - NM_000077 CDKN2A 0 . . . 1.47 66.91 28 7.68 Yes 9 0.21 No 0 0 No -27 0.94 Yes 41 74.18 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69109239 + NM_133509 RAD51B 0 . . . 1.45 0 47 7.67 Yes 60 1.3 Yes 0 0 No -46 0.79 Yes 39 64.62 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68898807 + NM_133509 RAD51B 0 . . . 0.19 0 14 5.2 No 11 0.32 No 0 0 No -59 0.74 Yes 43 44.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 104183332 - NM_001100119 XRCC3 0 . . . 1.64 62.99 18 4.9 No 49 -1.04 No 0 0 No -17 0.66 Yes 46 44.62 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68460701 + NM_133509 RAD51B 0 . . . 0.66 69.27 13 4.36 No 69 1.04 Yes 0 0 No -42 0.53 No 47 64.69 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6040657 - NM_000535 PMS2 0 . . . 4.34 79.73 40 6.17 Yes 10 0.46 No 0 0 No -30 0.51 No 43 78.15 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89651109 + NM_000314 PTEN 0 . . . 4.17 79.82 28 5.81 Yes 1 0.92 Yes 0 0 No -27 0.83 Yes 45 65.71 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23613059 - NM_024675 PALB2 0 . . . 1.91 0 10 4.58 No 32 0.45 No 0 0 No -9 0.3 No 38 63.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56800018 + NM_058216 RAD51C 0 . . . 0.38 84.05 16 4.47 No 62 0.7 No 0 0 No -43 0.51 No 41 72.91 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108142998 + NM_000051 ATM 0 . . . 0.87 69.98 25 5.26 No 71 -2.98 No 0 0 No -24 0.64 No 48 70.01 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47640832 + NM_000251 MSH2 0 . . . 4.11 69.78 24 4.26 No 32 0.3 No 0 0 No -30 0.52 No 43 52.54 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47705131 + NM_000251 MSH2 0 . . . 1.97 88.76 16 5.38 No 16 0.85 Yes 0 0 No -15 0.32 No 42 87.62 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68907682 + NM_133509 RAD51B 0 . . . 1.29 76.38 29 6.78 Yes 48 0.52 No 0 0 No -27 0.39 No 49 57.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68344660 + NM_133509 RAD51B 0 . . . 1.44 66.56 20 5 No 70 1.51 Yes 0 0 No -19 0.48 No 25 83.49 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108095257 + NM_000051 ATM 0 . . . 3.6 70.5 21 7.21 Yes 3 1.49 Yes 0 0 No -20 0.74 Yes 41 71.96 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215621981 - NM_000465 BARD1 0 . . . 2.16 74.1 26 5 No 72 -5.52 No 0 0 No -25 0.82 Yes 51 65.37 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68323594 + NM_133509 RAD51B 0 . . . 3.4 76.44 18 4.47 No 24 2.27 Yes 0 0 No -49 0.59 No 27 78.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108238188 + NM_000051 ATM 0 . . . 8.95 84.67 21 4.9 No 40 -2.19 No 0 0 No -20 0.87 Yes 44 67.34 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89657110 + NM_000314 PTEN 0 . . . 0.22 64.71 16 4.09 No 61 1.55 Yes 0 0 No -26 0.84 Yes 42 43.93 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215646519 - NM_000465 BARD1 0 . . . 4.25 69.59 15 5.72 Yes 33 0.06 No 0 0 No -26 0.74 Yes 56 40.11 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190651850 + NM_000534 PMS1 0 . . . 5.28 0 18 5.48 No 64 0.69 No 0 0 No -28 0.68 Yes 44 49.83 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47686684 + NM_000251 MSH2 0 . . . 9.22 84.81 17 4.8 No 4 0.85 Yes 0 0 No -25 0.59 No 29 45.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68464807 + NM_133509 RAD51B 0 . . . 2.05 67.7 24 6.37 Yes 32 -3.08 No 0 0 No -23 0.87 Yes 46 87.67 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68633507 + NM_133509 RAD51B 0 . . . 5.68 68.19 24 5.92 Yes 69 0.52 No 0 0 No -23 0.67 Yes 43 73.71 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131940002 + NM_005732 RAD50 0 . . . 5.06 93.17 38 8.52 Yes 48 0.71 No 0 0 No -24 0.4 No 43 51.35 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68333727 + NM_133509 RAD51B 0 . . . 4.54 78.14 30 4.98 No 30 0.25 No 0 0 No -29 0.62 No 34 62.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41025002 + NM_001164269 RAD51 0 . . . 2.53 86.06 22 5.05 No 70 1.56 Yes 0 0 No -21 0.81 Yes 25 36.54 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68372513 + NM_133509 RAD51B 0 . . . 1.61 0 57 5.57 Yes 40 1.08 Yes 0 0 No -31 0.74 Yes 28 50.37 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215617617 - NM_000465 BARD1 0 . . . 2.14 62.41 43 4.89 No 28 0.95 Yes 0 0 No -22 0.67 Yes 25 83.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6015677 - NM_000535 PMS2 0 . . . 0.11 74.73 13 5.29 No 33 1.16 Yes 0 0 No -30 0.41 No 40 73.51 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68713003 + NM_133509 RAD51B 0 . . . 5.52 75.16 17 4.69 No 67 0.37 No 0 0 No -20 0.48 No 46 66.96 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68976182 + NM_133509 RAD51B 0 . . . 3.26 78.65 18 4.69 No 28 1.56 Yes 0 0 No -17 0.47 No 40 63.8 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68699785 + NM_133509 RAD51B 0 . . . 2.54 73.92 25 4.78 No 4 0.87 Yes 0 0 No -57 0.48 No 54 63.75 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr13 32897371 + NM_000059 BRCA2 0 . . . 0.75 63.93 25 4.9 No -4 0.7 No 0 0 No -25 0.44 No 43 54.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 23644314 - NM_024675 PALB2 0 . . . 1.93 83.16 12 5.27 No 33 0.98 Yes 0 0 No -51 0.34 No 25 42.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23632363 - NM_024675 PALB2 0 . . . 4.23 80.64 16 4.69 No 8 1.06 Yes 0 0 No -44 0.88 Yes 50 87.09 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59801051 - NM_032043 BRIP1 0 . . . 1.38 73.54 22 5.2 No 66 1.18 Yes 0 0 No -21 0.49 No 45 57.86 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68739423 + NM_133509 RAD51B 0 . . . 4.74 84.41 28 5.39 No 69 -2.1 No 0 0 No -27 0.83 Yes 28 40.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69107519 + NM_133509 RAD51B 0 . . . 1.09 0 17 4.33 No -1 0.23 No 0 0 No -28 0.4 No 43 77.23 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90977259 - NM_002485 NBN 0 . . . 0.3 0 33 4.54 No 15 0.4 No 0 0 No -28 0.74 Yes 43 74.89 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68892038 + NM_133509 RAD51B 0 . . . 5.72 74.66 24 5.59 Yes 43 1.27 Yes 0 0 No -24 0.87 Yes 39 70.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68596106 + NM_133509 RAD51B 0 . . . 5.24 78.13 21 7.21 Yes 15 0.25 No 0 0 No -20 0.82 Yes 43 96.62 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr13 32946422 + NM_000059 BRCA2 0 . . . 0.06 77.1 36 6.24 Yes 52 1.21 Yes 0 0 No -36 0.3 No 52 26.45 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68629918 + NM_133509 RAD51B 0 . . . 1.13 84.21 26 4.95 No 76 -4.6 No 0 0 No -15 0.46 No 45 88.51 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131898448 + NM_005732 RAD50 0 . . . 0.75 75.74 26 4.9 No -2 0.32 No 0 0 No -29 0.58 No 51 78.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47643684 + NM_000251 MSH2 0 . . . 4.17 81.69 20 5.27 No -3 0.1 No 0 0 No -19 0.67 Yes 42 50.5 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94149846 - NM_005591 MRE11 0 . . . 7.28 85.02 21 5.2 No 18 1.63 Yes 0 0 No -23 0.74 Yes 40 95.6 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131957407 + NM_005732 RAD50 0 . . . 5.03 82.28 18 4.9 No 50 1.12 Yes 0 0 No -19 0.66 No 43 73.04 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59910072 - NM_032043 BRIP1 0 . . . 3.34 69.93 27 4.91 No 39 1.49 Yes 0 0 No -26 0.48 No 45 70.34 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 7589439 - NM_000546 TP53 0 . . . 8.53 79.54 12 4.9 No 35 -2.78 No 0 0 No -24 0.3 No 44 48.73 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68654552 + NM_133509 RAD51B 0 . . . 5.03 87.39 38 6.93 Yes 42 0.48 No 0 0 No -27 0.6 No 37 74.16 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84391284 - NM_139076 FAM175A 0 . . . 2.64 0 25 4.95 No 8 0.87 Yes 0 0 No -24 0.89 Yes 50 91.1 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48019086 + NM_000179 MSH6 0 . . . 8.18 81.76 11 4.12 No 15 0.9 Yes 0 0 No -28 0.92 Yes 43 83.38 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr15 41009933 + NM_001164269 RAD51 0 . . . 4.13 68.3 16 5.15 No 35 0.54 No 0 0 No -23 0.86 Yes 14 49.48 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59870363 - NM_032043 BRIP1 0 . . . 5.81 74.19 51 7.07 Yes 64 0.13 No 0 0 No -46 0.4 No 49 54.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68983137 + NM_133509 RAD51B 0 . . . 4.65 67.82 22 5.44 No 35 1 Yes 0 0 No -21 0.53 No 33 66.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 108227756 + NM_000051 ATM 0 . . . 1.59 79.97 35 5.97 Yes 9 0.5 No 0 0 No -57 0.66 No 49 56.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69043129 + NM_133509 RAD51B 0 . . . 3.64 72.09 29 5.8 Yes 31 -1.06 No 0 0 No -28 0.93 Yes 39 70.47 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59833725 - NM_032043 BRIP1 0 . . . 0.84 66.35 10 4.8 No 8 0.93 Yes 0 0 No -39 0.47 No 50 59.33 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41001753 + NM_001164269 RAD51 0 . . . 4.31 85.02 22 5 No 4 1.2 Yes 0 0 No -24 0.52 No 43 74.6 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59902074 - NM_032043 BRIP1 0 . . . 6.55 90.81 35 3.54 No 12 0.61 No 0 0 No -20 0.57 No 46 97.33 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59886650 - NM_032043 BRIP1 0 . . . 2.39 76.56 16 3.71 No 22 0.98 Yes 0 0 No -53 0.83 Yes 36 83.24 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68720328 + NM_133509 RAD51B 0 . . . 6 80.32 19 4.76 No 42 0.7 No 0 0 No -18 0.48 No 42 90.27 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56800878 + NM_058216 RAD51C 0 . . . 1.93 0 22 5.1 No 9 0.92 Yes 0 0 No -21 0.76 Yes 49 72.22 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108198741 + NM_000051 ATM 0 . . . 3.12 0 19 7.07 Yes 48 0.28 No 0 0 No -18 0.69 Yes 24 70.82 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69137190 + NM_133509 RAD51B 0 . . . 1.44 69.47 25 4.58 No 63 1.15 Yes 0 0 No -22 0.84 Yes 40 96.07 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47771592 + NM_000251 MSH2 0 . . . 7.88 92.17 42 6.3 Yes 57 0.48 No 0 0 No -34 0.53 No 37 53.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68859585 + NM_133509 RAD51B 0 . . . 2.01 71.92 45 5.65 Yes 47 1.55 Yes 0 0 No -23 0.45 No 48 42.17 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89671053 + NM_000314 PTEN 0 . . . 7.24 75.49 32 6.55 Yes 48 0.49 No 0 0 No -31 0.73 Yes 42 73.87 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68820582 + NM_133509 RAD51B 0 . . . 0.03 71.21 18 4.83 No 33 0.66 No 0 0 No -25 0.57 No 39 49.83 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68692706 + NM_133509 RAD51B 0 . . . 0.7 72.08 28 4.68 No 42 0.28 No 0 0 No -27 0.79 Yes 51 49.99 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108130184 + NM_000051 ATM 0 . . . 2.1 76.63 34 6.06 Yes 55 -3.69 No 0 0 No -33 0.64 No 43 52.86 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6009967 - NM_000535 PMS2 0 . . . 5.45 81.05 24 6.78 Yes 0 0.54 No 0 0 No -23 0.84 Yes 47 91.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 94186516 - NM_005591 MRE11 0 . . . 0.55 65.24 18 5.23 No 63 -5.27 No 0 0 No -21 0.57 No 45 60.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41023480 + NM_001164269 RAD51 0 . . . 7.61 81.01 17 4.68 No 46 0.76 No 0 0 No -21 0.5 No 44 81.66 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 48021846 + NM_000179 MSH6 0 . . . 8.89 86.88 66 7.5 Yes 62 0.88 Yes 0 0 No -37 0.64 No 36 69.33 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47694270 + NM_000251 MSH2 0 . . . 7.99 78.32 49 6.93 Yes 3 1.13 Yes 0 0 No -29 0.44 No 44 67.46 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr11 94209615 - NM_005591 MRE11 0 . . . 0.52 78.25 17 5.2 No -2 0.26 No 0 0 No -20 0.41 No 49 58.26 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68786113 + NM_133509 RAD51B 0 . . . 5.13 73.53 26 7.23 Yes 19 1.21 Yes 0 0 No -29 0.57 No 35 73.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 52441876 - NM_004656 BAP1 0 . . . 2.34 72.29 34 4.98 No 68 -4.74 No 0 0 No -19 0.62 No 45 58.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89629083 + NM_000314 PTEN 0 . . . 1.97 0 22 3.97 No 15 1.1 Yes 0 0 No -25 0.71 Yes 43 95.13 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108138464 + NM_000051 ATM 0 . . . 0.36 61.05 9 5.66 Yes 55 1.33 Yes 0 0 No -50 0.5 No 49 27.11 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68503169 + NM_133509 RAD51B 0 . . . 4.13 76.57 26 6.95 Yes 54 -1.98 No 0 0 No -25 0.8 Yes 48 70.8 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 48035233 + NM_000179 MSH6 0 . . . 5.24 80.09 20 5.55 No 71 0.38 No 0 0 No -24 0.79 Yes 48 67.02 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 23613673 - NM_024675 PALB2 0 . . . 2.71 78.28 26 5.34 No 33 1.04 Yes 0 0 No -25 0.67 Yes 25 50.81 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68760304 + NM_133509 RAD51B 0 . . . 1.25 0 35 7.3 Yes 74 0.05 No 0 0 No -25 0.6 No 27 59.27 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68628331 + NM_133509 RAD51B 0 . . . 0.34 73.52 29 5.89 Yes 20 0.32 No 0 0 No -28 0.65 No 30 59.55 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108172565 + NM_000051 ATM 0 . . . 1.82 69.21 30 4.39 No 22 0.41 No 0 0 No -29 0.79 Yes 33 52.54 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68529067 + NM_133509 RAD51B 0 . . . 1.3 75.17 35 7.77 Yes 75 1.34 Yes 0 0 No -34 0.88 Yes 24 76.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr5 131919821 + NM_005732 RAD50 0 . . . 4.14 0 33 5.83 Yes 54 1.04 Yes 0 0 No -32 0.41 No 54 60.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68797617 + NM_133509 RAD51B 0 . . . 2.94 70.62 30 5.36 No 34 0.99 Yes 0 0 No -25 0.76 Yes 50 67.63 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131920006 + NM_005732 RAD50 0 . . . 0.68 81.23 24 4.17 No 51 0.74 No 0 0 No -23 0.57 No 34 74.29 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37089353 + NM_000249 MLH1 0 . . . 1.28 55.17 17 4.76 No 14 0.24 No 0 0 No -24 0.71 Yes 36 41.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29106597 - NM_001005735 CHEK2 0 . . . 4.16 84.58 9 4.03 No 5 1.23 Yes 0 0 No -22 0.54 No 47 81.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215660076 - NM_000465 BARD1 0 . . . 6.61 78.34 16 6.93 Yes 11 0.56 No 0 0 No -31 0.48 No 47 87.19 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37036621 + NM_000249 MLH1 0 . . . 6.25 80.12 16 5.21 No 69 0.59 No 0 0 No -22 0.52 No 49 86.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215666863 - NM_000465 BARD1 0 . . . 8.34 91.31 15 5.72 Yes 18 0.47 No 0 0 No -26 0.46 No 46 64.25 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108097616 + NM_000051 ATM 0 . . . 0.41 69.11 10 4 No 72 0.03 No 0 0 No -27 0.79 Yes 49 48.58 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68652786 + NM_133509 RAD51B 0 . . . 2.01 76.18 9 5.2 No 38 -3.91 No 0 0 No -18 0.36 No 52 22.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 48016623 + NM_000179 MSH6 0 . . . 5.79 70.94 21 4.28 No 1 0.5 No 0 0 No -20 0.52 No 45 53.85 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr8 90949078 - NM_002485 NBN 0 . . . 2.64 79.06 18 5.39 No 45 1.36 Yes 0 0 No -17 0.58 No 38 83.66 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr3 37045576 + NM_000249 MLH1 0 . . . 0.64 61.77 15 5.28 No 31 0.87 Yes 0 0 No -21 0.67 Yes 46 66.82 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47746993 + NM_000251 MSH2 0 . . . 4.67 86.98 19 4.9 No 29 1.01 Yes 0 0 No -19 0.58 No 37 71.67 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69007831 + NM_133509 RAD51B 0 . . . 9.52 83.18 19 5.74 Yes -2 0.23 No 0 0 No -30 0.64 No 48 64.7 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68744798 + NM_133509 RAD51B 0 . . . 7.02 87.22 15 5.83 Yes 53 -1.86 No 0 0 No -14 0.46 No 49 82.59 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59826654 - NM_032043 BRIP1 0 . . . 11.73 91.07 25 6.66 Yes 74 1.64 Yes 0 0 No -25 0.51 No 43 75.63 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68915445 + NM_133509 RAD51B 0 . . . 2.86 75.3 16 4.69 No 58 -1.16 No 0 0 No -49 0.71 Yes 46 46.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89641370 + NM_000314 PTEN 0 . . . 4.41 90.18 18 4.58 No 49 1 Yes 0 0 No -17 0.94 Yes 37 70.75 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 48024883 + NM_000179 MSH6 0 . . . 6 77.95 36 5.5 No 30 0.87 Yes 0 0 No -35 0.66 No 41 61.85 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68985551 + NM_133509 RAD51B 0 . . . 2.56 70.46 27 4.12 No 55 1.46 Yes 0 0 No -22 0.5 No 22 79.93 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21970152 - NM_000077 CDKN2A 0 . . . 6.97 77.12 28 5.2 No 30 0.56 No 0 0 No -27 0.91 Yes 33 78.85 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68510084 + NM_133509 RAD51B 0 . . . 6.64 75.67 22 4.99 No 25 0.43 No 0 0 No -21 0.92 Yes 48 72.4 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68673493 + NM_133509 RAD51B 0 . . . 1.52 73.86 19 6.77 Yes 74 1.19 Yes 0 0 No -30 0.48 No 43 81.38 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47694108 + NM_000251 MSH2 0 . . . 3.01 70.52 14 5.1 No 61 0.16 No 0 0 No -28 0.32 No 51 63.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41017578 + NM_001164269 RAD51 0 . . . 7.79 91.81 17 5.66 Yes 46 0.92 Yes 0 0 No -25 0.79 Yes 38 92.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 108206319 + NM_000051 ATM 0 . . . 0.8 0 17 5.57 Yes 67 1.14 Yes 0 0 No -24 0.5 No 54 47.59 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69069022 + NM_133509 RAD51B 0 . . . 2.71 59.26 21 5 No 59 0.81 Yes 0 0 No -47 0.75 Yes 39 62.39 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89655763 + NM_000314 PTEN 0 . . . 3.59 64.68 29 5.88 Yes 33 0.16 No 0 0 No -28 0.78 Yes 39 44.16 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89621554 + NM_000314 PTEN 0 . . . 1.79 74.88 20 4.69 No 38 0.93 Yes 0 0 No -27 0.31 No 20 33.46 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75490857 - NM_001040108 MLH3 0 . . . 0.7 74.07 21 5.74 Yes 65 0.36 No 0 0 No -26 0.58 No 45 38.29 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94149285 - NM_005591 MRE11 0 . . . 1.32 63.99 28 5.01 No 74 1.43 Yes 0 0 No -58 0.42 No 50 43 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59890929 - NM_032043 BRIP1 0 . . . 7.23 78.94 23 3.58 No 15 1.11 Yes 0 0 No -22 0.69 Yes 43 84.52 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215619924 - NM_000465 BARD1 0 . . . 7.15 78.79 16 6.4 Yes 2 1.97 Yes 0 0 No -34 0.49 No 49 73.59 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190661707 + NM_000534 PMS1 0 . . . 0.56 60.39 21 4.43 No 38 1.05 Yes 0 0 No -25 0.51 No 37 72.65 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47649156 + NM_000251 MSH2 0 . . . 3.17 72.26 19 5.52 No 39 0.21 No 0 0 No -24 0.43 No 48 80.2 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59765334 - NM_032043 BRIP1 0 . . . 0.44 74.83 31 5.05 No 46 -3.99 No 0 0 No -27 0.59 No 19 47.3 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59755401 - NM_032043 BRIP1 0 . . . 9.03 81.96 19 4.36 No 73 0.39 No 0 0 No -26 0.55 No 47 84.75 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89634624 + NM_000314 PTEN 0 . . . 1.66 0 29 7.35 Yes 38 0.82 Yes 0 0 No -28 0.88 Yes 41 62.63 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 7569518 - NM_000546 TP53 0 . . . 0.08 74.23 19 6.14 Yes 61 0.32 No 0 0 No -25 0.55 No 54 51.74 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47784969 + NM_000251 MSH2 0 . . . 2.56 74.4 29 5.46 No 33 1.35 Yes 0 0 No -23 0.65 No 41 60.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68716382 + NM_133509 RAD51B 0 . . . 0.74 59.95 44 6.16 Yes 13 1.71 Yes 0 0 No -25 0.86 Yes 32 94.39 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56800130 + NM_058216 RAD51C 0 . . . 8.13 75.86 18 5.29 No 32 0.82 Yes 0 0 No -21 0.69 Yes 49 64.29 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32924460 + NM_000059 BRCA2 0 . . . 3.97 76.73 33 6.55 Yes 64 -3.44 No 0 0 No -32 0.57 No 49 34.32 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68888556 + NM_133509 RAD51B 0 . . . 2.97 69.19 18 5.89 Yes 28 -0.5 No 0 0 No -20 0.68 Yes 14 40.77 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56786582 + NM_058216 RAD51C 0 . . . 1.24 77.99 29 7.35 Yes 14 -0.85 No 0 0 No -28 0.92 Yes 53 67.27 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47777542 + NM_000251 MSH2 0 . . . 4.74 84.41 25 5.75 Yes 19 1.03 Yes 0 0 No -24 0.52 No 39 98.51 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131895033 + NM_005732 RAD50 0 . . . 2.42 68.85 30 4.76 No 68 0.7 No 0 0 No -32 0.5 No 22 41.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94176269 - NM_005591 MRE11 0 . . . 2.35 72.72 24 6.54 Yes 49 1.08 Yes 0 0 No -22 0.6 No 40 70.24 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47755599 + NM_000251 MSH2 0 . . . 2.37 64.2 21 4.56 No 48 0.21 No 0 0 No -20 0.76 Yes 35 61.17 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59912367 - NM_032043 BRIP1 0 . . . 4.27 76.63 23 4.73 No 15 1.63 Yes 0 0 No -22 0.52 No 43 69.05 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41256698 - NM_007294 BRCA1 0 . . . 2.62 72.33 17 5.83 Yes 12 1.46 Yes 0 0 No -16 0.45 No 46 93.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68949379 + NM_133509 RAD51B 0 . . . 8.11 87.65 25 4.3 No 40 0.51 No 0 0 No -24 0.36 No 44 47.8 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41259529 - NM_007294 BRCA1 0 . . . 1.51 77.18 17 5.71 Yes 75 -5.88 No 0 0 No -29 0.37 No 37 63.13 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190674781 + NM_000534 PMS1 0 . . . 8.12 85.23 28 4.78 No 45 0.59 No 0 0 No -27 0.74 Yes 42 78.54 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68664889 + NM_133509 RAD51B 0 . . . 8.11 86.18 14 4.79 No 49 0.74 No 0 0 No -23 0.58 No 45 88.32 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 47778883 + NM_000251 MSH2 0 . . . 3.53 73.93 18 4.8 No 13 0.98 Yes 0 0 No -16 0.57 No 45 81.58 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68304463 + NM_133509 RAD51B 0 . . . 3.66 67.87 20 3.98 No 57 0.33 No 0 0 No -19 0.59 No 37 54.01 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29094491 - NM_001005735 CHEK2 0 . . . 2.63 78.06 24 5.48 No 6 0.48 No 0 0 No -23 0.43 No 52 89.46 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 23632230 - NM_024675 PALB2 0 . . . 6.74 83.82 23 5.2 No 5 1.23 Yes 0 0 No -22 0.97 Yes 53 80.54 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68803041 + NM_133509 RAD51B 0 . . . 0.81 72.54 20 4.44 No 61 0.55 No 0 0 No -19 0.76 Yes 39 46.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32963408 + NM_000059 BRCA2 0 . . . 2.26 68.17 25 6.24 Yes 46 1 Yes 0 0 No -24 0.8 Yes 44 47.09 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131921689 + NM_005732 RAD50 0 . . . 5.05 78.98 32 6 Yes 27 1.13 Yes 0 0 No -29 0.83 Yes 51 62.3 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68705486 + NM_133509 RAD51B 0 . . . 3.61 77.81 20 5.1 No 43 0.32 No 0 0 No -19 0.5 No 49 36.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68358959 + NM_133509 RAD51B 0 . . . 1.92 72.13 46 7.21 Yes 55 1.42 Yes 0 0 No -45 0.67 Yes 47 88.05 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47695829 + NM_000251 MSH2 0 . . . 3.86 72.94 14 5.1 No 30 1.88 Yes 0 0 No -24 0.6 No 28 53.56 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47757239 + NM_000251 MSH2 0 . . . 0.56 76.43 22 5.1 No 43 0.59 No 0 0 No -21 0.92 Yes 50 32.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47638568 + NM_000251 MSH2 0 . . . 1.07 84.41 14 4.47 No 73 0.77 Yes 0 0 No -31 0.61 No 51 83.33 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68347766 + NM_133509 RAD51B 0 . . . 2.21 85.68 15 3.85 No 72 -4.12 No 0 0 No -14 0.54 No 47 87.37 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr7 6022875 - NM_000535 PMS2 0 . . . 0.22 74.23 24 4.9 No 63 1.12 Yes 0 0 No -23 0.67 Yes 38 53.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 23637559 - NM_024675 PALB2 0 . . . 5.32 79.06 14 4.9 No 6 -2.28 No 0 0 No -25 0.45 No 52 45.72 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68538914 + NM_133509 RAD51B 0 . . . 3.15 0 27 3.74 No 76 -2.46 No 0 0 No -26 0.44 No 38 35.61 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 75508716 - NM_001040108 MLH3 0 . . . 4.82 64.44 23 4.57 No 51 -2.97 No 0 0 No -22 0.84 Yes 37 71.66 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69106313 + NM_133509 RAD51B 0 . . . 1.54 75.84 32 5.97 Yes 53 -2.45 No 0 0 No -31 0.63 No 55 28.64 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68349287 + NM_133509 RAD51B 0 . . . 2.78 64.01 29 6.55 Yes 47 1.12 Yes 0 0 No -28 0.84 Yes 35 53.65 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68464770 + NM_133509 RAD51B 0 . . . 6 90.77 21 4.79 No 57 -2.96 No 0 0 No -21 0.76 Yes 51 47.1 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68373296 + NM_133509 RAD51B 0 . . . 2.48 65.16 46 6.93 Yes 10 0.46 No 0 0 No -45 0.7 Yes 48 55.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40988260 + NM_001164269 RAD51 0 . . . 2.45 80.12 36 5.69 Yes 7 1.14 Yes 0 0 No -29 0.44 No 51 76.13 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr9 21967698 - NM_000077 CDKN2A 0 . . . 0.48 65.92 22 3.89 No 46 1.18 Yes 0 0 No -43 0.76 Yes 12 54.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68695961 + NM_133509 RAD51B 0 . . . 6.54 72.23 14 5.66 Yes -4 0.87 Yes 0 0 No -26 0.6 No 43 55.01 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68955716 + NM_133509 RAD51B 0 . . . 5.02 82.16 29 5.89 Yes 46 0.8 Yes 0 0 No -28 0.75 Yes 12 76.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56812742 + NM_058216 RAD51C 0 . . . 6.65 81.28 20 4.29 No 62 1.33 Yes 0 0 No -37 0.6 No 50 92.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89723746 + NM_000314 PTEN 0 . . . 5.52 78.27 33 5.2 No 12 1.12 Yes 0 0 No -32 0.64 No 46 94.78 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190723594 + NM_000534 PMS1 0 . . . 8.43 84.52 25 5.38 No 2 1.1 Yes 0 0 No -24 0.93 Yes 42 68.05 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68464228 + NM_133509 RAD51B 0 . . . 7.62 79.22 37 6.42 Yes 69 0.91 Yes 0 0 No -27 0.68 Yes 41 77.23 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68723532 + NM_133509 RAD51B 0 . . . 1.85 82.31 28 4.95 No 63 1.54 Yes 0 0 No -54 0.43 No 47 60.01 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68806472 + NM_133509 RAD51B 0 . . . 7.65 77.36 43 7.23 Yes 14 1.36 Yes 0 0 No -29 0.58 No 44 90.36 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1204183 + NM_000455 STK11 0 . . . 0.42 74.73 21 5.02 No 38 1.14 Yes 0 0 No -20 0.39 No 20 83.44 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 75481747 - NM_001040108 MLH3 0 . . . 1.76 0 15 4.47 No 7 1.14 Yes 0 0 No -42 0.41 No 34 75.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 56795742 + NM_058216 RAD51C 0 . . . 4.75 78.49 30 5.74 Yes 16 1 Yes 0 0 No -24 0.65 No 42 96.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 94175335 - NM_005591 MRE11 0 . . . 9.87 78.46 41 7.12 Yes 13 1.45 Yes 0 0 No -30 0.67 Yes 45 63.52 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68423174 + NM_133509 RAD51B 0 . . . 1.9 72.03 17 6 Yes 65 -4.79 No 0 0 No -16 0.48 No 50 54.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89627291 + NM_000314 PTEN 0 . . . 3.47 71.35 19 5.83 Yes 24 0.37 No 0 0 No -27 0.76 Yes 34 60.39 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32937453 + NM_000059 BRCA2 0 . . . 2.79 70.27 145 11.07 Yes 28 1.3 Yes 0 0 No -42 0.29 No 40 77.16 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69063559 + NM_133509 RAD51B 0 . . . 1.54 79.87 12 4.24 No -2 0.74 No 0 0 No -27 0.8 Yes 51 70.24 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89635235 + NM_000314 PTEN 0 . . . 4.49 82.65 19 6.63 Yes 25 0.95 Yes 0 0 No -31 0.75 Yes 45 69.79 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215649848 - NM_000465 BARD1 0 . . . 8.86 79.82 28 5.86 Yes 1 0.11 No 0 0 No -27 0.92 Yes 44 92.81 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21975937 - NM_000077 CDKN2A 0 . . . 0.12 64.22 22 3.76 No 40 -3.59 No 0 0 No -35 0.78 Yes 35 56.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47637329 + NM_000251 MSH2 0 . . . 4.99 70.01 26 4.31 No 63 0.23 No 0 0 No -25 0.92 Yes 32 89.13 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 104178453 - NM_001100119 XRCC3 0 . . . 4.92 77.27 12 4.5 No 6 1.05 Yes 29 0.74 Yes -19 0.65 No 52 75.7 Yes BPP: No, SVM: Yes, Branch: , LB: No, RNABPS: Yes chr7 105181195 + NM_021930 RINT1 0 . . . 0.15 0 18 5.83 Yes 35 1.24 Yes 0 0 No -28 0.45 No 36 61.37 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68388853 + NM_133509 RAD51B 0 . . . 4.46 72.8 63 8.13 Yes 4 0.78 Yes 0 0 No -27 0.81 Yes 37 91.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr11 94160104 - NM_005591 MRE11 0 . . . 2.43 64.46 55 8.32 Yes 66 0.57 No 0 0 No -33 0.65 No 43 89.47 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr10 89691127 + NM_000314 PTEN 0 . . . 0.76 74.62 28 6.24 Yes 2 0.29 No 0 0 No -27 0.8 Yes 43 57.55 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108165902 + NM_000051 ATM 0 . . . 4.71 76.18 48 7.62 Yes -3 0.21 No 0 0 No -20 0.67 Yes 48 92.29 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131894877 + NM_005732 RAD50 0 . . . 6.31 83.82 48 7.21 Yes 44 0.89 Yes 0 0 No -37 0.28 No 47 72.62 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89671862 + NM_000314 PTEN 0 . . . 2.24 80.12 22 5.74 Yes 7 1.02 Yes 0 0 No -21 0.47 No 51 83.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68362611 + NM_133509 RAD51B 0 . . . 0.79 74.79 32 5.43 No 11 1.17 Yes 0 0 No -31 0.49 No 32 78.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89638912 + NM_000314 PTEN 0 . . . 4.84 86.63 17 6.08 Yes 64 -2.12 No 0 0 No -27 0.41 No 37 76.13 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 215641996 - NM_000465 BARD1 0 . . . 5.43 74.71 16 4.29 No 0 1.55 Yes 0 0 No -28 0.91 Yes 48 65.84 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68528339 + NM_133509 RAD51B 0 . . . 5.69 73.41 16 4.24 No 3 1.04 Yes 0 0 No -15 0.42 No 44 80.69 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89642473 + NM_000314 PTEN 0 . . . 8.64 82.81 21 4.16 No 23 2.43 Yes 0 0 No -49 0.66 No 35 87.25 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68504663 + NM_133509 RAD51B 0 . . . 3.95 80.84 49 7.02 Yes 11 0.59 No 0 0 No -30 0.84 Yes 47 96.97 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59923793 - NM_032043 BRIP1 0 . . . 0.45 73.28 18 6.22 Yes 59 -4.08 No 0 0 No -33 0.47 No 41 51.87 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89691289 + NM_000314 PTEN 0 . . . 3.39 0 13 5.38 No 6 0.1 No 0 0 No -22 0.55 No 51 66.07 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69108836 + NM_133509 RAD51B 0 . . . 2.87 76.75 29 5.91 Yes 33 1 Yes 0 0 No -28 0.7 Yes 22 87.57 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 59827912 - NM_032043 BRIP1 0 . . . 6.78 81.55 46 5.15 No 1 0.95 Yes 0 0 No -19 0.37 No 48 89.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68345440 + NM_133509 RAD51B 0 . . . 3.77 83.86 15 4.59 No 59 0.63 No 0 0 No -54 0.52 No 30 91.31 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84388127 - NM_139076 FAM175A 0 . . . 2.1 61.35 28 5.38 No 60 1.07 Yes 0 0 No -27 0.56 No 52 85.08 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr22 29101353 - NM_001005735 CHEK2 0 . . . 0.96 65.44 29 5.74 Yes 43 0.26 No 0 0 No -26 0.61 No 46 79.4 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84386256 - NM_139076 FAM175A 0 . . . 2.8 75.18 39 4.67 No 33 1.12 Yes 0 0 No -34 0.55 No 39 31.77 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6021495 - NM_000535 PMS2 0 . . . 2.64 67.03 16 5.74 Yes 53 0.49 No 0 0 No -30 0.42 No 43 46.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47631137 + NM_000251 MSH2 0 . . . 1.99 68.15 36 5.51 No 0 0.52 No 0 0 No -35 0.51 No 47 80.98 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68383985 + NM_133509 RAD51B 0 . . . 6.86 81.45 9 3.87 No 52 -2.45 No 0 0 No -27 0.97 Yes 50 93.61 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr7 6012598 - NM_000535 PMS2 0 . . . 3.53 83.53 29 5.84 Yes 72 1.1 Yes 0 0 No -28 0.51 No 42 54.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29107636 - NM_001005735 CHEK2 0 . . . 7.75 78.81 19 4.32 No 27 0.14 No 0 0 No -22 0.77 Yes 45 77.45 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69062688 + NM_133509 RAD51B 0 . . . 8.71 82.63 23 4.36 No 34 0.99 Yes 0 0 No -23 0.54 No 43 45.89 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41221287 - NM_007294 BRCA1 0 . . . 0.75 79.7 15 3.87 No -2 0.34 No 0 0 No -35 0.52 No 49 40.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108111494 + NM_000051 ATM 0 . . . 0.84 65.56 18 4.57 No -4 0.56 No 0 0 No -32 0.65 No 62 21.6 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59823810 - NM_032043 BRIP1 0 . . . 1.83 71.34 24 4.8 No 41 0.98 Yes 0 0 No -42 0.47 No 17 42.44 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131925082 + NM_005732 RAD50 0 . . . 0.59 64.79 22 4.94 No 58 -4.95 No 0 0 No -21 0.78 Yes 26 33.45 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 41008799 + NM_001164269 RAD51 0 . . . 5.92 82.31 17 4.58 No 58 1.36 Yes 0 0 No -21 0.46 No 55 48.91 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105177447 + NM_021930 RINT1 0 . . . 0.72 0 21 5.05 No 44 0.9 Yes 0 0 No -20 0.61 No 47 73.2 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68581566 + NM_133509 RAD51B 0 . . . 3.92 74.63 54 5.03 No 66 0.06 No 0 0 No -36 0.88 Yes 43 57.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68340539 + NM_133509 RAD51B 0 . . . 0.65 78.44 30 6.26 Yes 35 0.49 No 0 0 No -25 0.27 No 48 49.51 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59801885 - NM_032043 BRIP1 0 . . . 7.14 94.28 23 5.29 No 16 0.64 No 0 0 No -21 0.74 Yes 48 81.27 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131943515 + NM_005732 RAD50 0 . . . 1.22 76.06 18 4.63 No 9 1.29 Yes 0 0 No -17 0.33 No 49 87.38 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68673770 + NM_133509 RAD51B 0 . . . 3.42 70.85 23 3.76 No 21 1.71 Yes 0 0 No -22 0.7 Yes 42 83.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68334834 + NM_133509 RAD51B 0 . . . 1.56 80.86 23 5.07 No 67 -5.09 No 0 0 No -25 0.61 No 52 64.33 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr10 89688776 + NM_000314 PTEN 0 . . . 4.03 80.95 25 5 No 2 0.87 Yes 0 0 No -24 0.88 Yes 46 43.69 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68869861 + NM_133509 RAD51B 0 . . . 3.51 65.67 33 6.24 Yes 38 1.26 Yes 0 0 No -33 0.62 No 20 79.4 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 152354431 - NM_005431 XRCC2 0 . . . 0.38 76.63 11 5.29 No 58 -3.78 No 0 0 No -22 0.64 No 55 53.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29132261 - NM_001005735 CHEK2 0 . . . 2.94 74.63 22 6.03 Yes 63 1.18 Yes 0 0 No -21 0.76 Yes 42 80.1 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 69008944 + NM_133509 RAD51B 0 . . . 0.16 74.16 25 5.11 No 11 0.24 No 0 0 No -24 0.79 Yes 47 45.77 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 56773523 + NM_058216 RAD51C 0 . . . 2.61 70.25 18 6.93 Yes 14 0.18 No 0 0 No -33 0.57 No 40 87.12 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190713028 + NM_000534 PMS1 0 . . . 1.55 62.85 30 5.83 Yes 68 0.43 No 0 0 No -29 0.56 No 46 59.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1217686 + NM_000455 STK11 0 . . . 5.74 78.64 44 6.85 Yes NA NA NA 0 0 No -35 0.54 No 53 64.66 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69097617 + NM_133509 RAD51B 0 . . . 2.59 79.51 23 5.36 No 44 1.01 Yes 0 0 No -23 0.6 No 44 57.98 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 6037028 - NM_000535 PMS2 0 . . . 7.62 88.81 21 3.62 No 43 1.23 Yes 0 0 No -27 0.79 Yes 15 66.62 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68679024 + NM_133509 RAD51B 0 . . . 0.66 67.16 29 5.39 No 26 -2.64 No 0 0 No -28 0.61 No 51 84.52 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41231630 - NM_007294 BRCA1 0 . . . 9.33 86.52 16 3.85 No 12 1.37 Yes 0 0 No -32 0.68 Yes 46 86.88 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152354104 - NM_005431 XRCC2 0 . . . 6.24 82.31 13 3.1 No 57 1.19 Yes 0 0 No -16 0.61 No 55 54.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68656618 + NM_133509 RAD51B 0 . . . 6.05 77.96 35 5.86 Yes 58 1.21 Yes 0 0 No -31 0.55 No 40 88.86 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68444418 + NM_133509 RAD51B 0 . . . 1.52 74.79 37 5.09 No 28 0.79 Yes 0 0 No -36 0.26 No 46 78.59 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89630010 + NM_000314 PTEN 0 . . . 4.67 78.69 34 5.74 Yes 3 1.22 Yes 0 0 No -50 0.35 No 39 70.3 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr10 89658728 + NM_000314 PTEN 0 . . . 1.54 72.67 33 4.33 No 60 0.18 No 0 0 No -33 0.56 No 48 91.69 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr15 41004311 + NM_001164269 RAD51 0 . . . 0.45 80.53 23 5.37 No 24 -1.16 No 0 0 No -22 0.74 Yes 60 33.05 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69079712 + NM_133509 RAD51B 0 . . . 12.42 89.82 15 4 No 41 1.29 Yes 0 0 No -29 0.61 No 34 89.71 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 215641008 - NM_000465 BARD1 0 . . . 5.26 83.42 13 6.57 Yes 70 0.02 No 0 0 No -29 0.35 No 39 76.99 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68591171 + NM_133509 RAD51B 0 . . . 6.78 87.33 39 7.24 Yes 54 0.52 No 0 0 No -25 0.64 No 49 57.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32926057 + NM_000059 BRCA2 0 . . . 2.94 84.64 25 5.57 Yes 76 1.47 Yes 0 0 No -21 0.73 Yes 50 51.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94225152 - NM_005591 MRE11 0 . . . 7.86 88.96 47 6.78 Yes 42 1.37 Yes 0 0 No -22 0.41 No 45 81.35 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32900988 + NM_000059 BRCA2 0 . . . 3 67.27 32 5.91 Yes 75 -4.34 No 0 0 No -25 0.44 No 49 50.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108116017 + NM_000051 ATM 0 . . . 7.8 87.7 18 4.9 No 6 0.58 No 0 0 No -44 0.54 No 52 70.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68489064 + NM_133509 RAD51B 0 . . . 1.29 69.17 32 6 Yes 76 0.08 No 0 0 No -31 0.96 Yes 31 57.07 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47714290 + NM_000251 MSH2 0 . . . 2.04 76.67 28 5.48 No 40 -3.23 No 0 0 No -48 0.6 No 47 49.98 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 40987103 + NM_001164269 RAD51 0 . . . 0.79 63.77 36 6.48 Yes 47 1.01 Yes 0 0 No -35 0.66 No 47 50.23 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89707229 + NM_000314 PTEN 0 . . . 1.29 66.26 27 5.57 Yes 55 -0.85 No 0 0 No -26 0.47 No 41 93.02 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190725737 + NM_000534 PMS1 0 . . . 6.12 85.34 16 5.65 Yes 58 0.14 No 0 0 No -28 0.6 No 40 59.56 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94192523 - NM_005591 MRE11 0 . . . 2.37 0 26 5.75 Yes 28 0.02 No 0 0 No -25 0.88 Yes 48 65.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41225000 - NM_007294 BRCA1 0 . . . 0.54 74.09 26 6.44 Yes 72 0.5 No 0 0 No -25 0.74 Yes 43 85.06 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr15 41022227 + NM_001164269 RAD51 0 . . . 1.21 70.87 34 6.21 Yes 32 0.93 Yes 0 0 No -33 0.6 No 61 55.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 41007791 + NM_001164269 RAD51 0 . . . 2.95 75.58 22 5.29 No 10 0.3 No 0 0 No -58 0.37 No 48 87.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr11 108097860 + NM_000051 ATM 0 . . . 1.08 84.22 26 7.37 Yes 33 1.03 Yes 0 0 No -25 0.45 No 50 59.7 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89665780 + NM_000314 PTEN 0 . . . 1.34 0 13 5.03 No 49 0.83 Yes 0 0 No -19 0.45 No 47 80.96 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68780387 + NM_133509 RAD51B 0 . . . 2.55 79.82 56 7.63 Yes 47 0.25 No 0 0 No -21 0.23 No 48 95.77 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37044272 + NM_000249 MLH1 0 . . . 7.79 85.55 24 5.02 No 8 1.27 Yes 0 0 No -40 0.66 Yes 50 88.46 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr19 1213778 + NM_000455 STK11 0 . . . 2.54 75.97 43 7.18 Yes 28 0.88 Yes 0 0 No -42 0.65 No 55 56.5 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 33447792 - NM_002878 RAD51D 0 . . . 5.38 73.64 21 4.67 No 16 1.47 Yes 0 0 No -20 0.68 Yes 42 62.99 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68405798 + NM_133509 RAD51B 0 . . . 1 0 20 5.1 No 7 0.22 No 0 0 No -19 0.77 Yes 51 51.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37054609 + NM_000249 MLH1 0 . . . 2.83 74.35 12 4.8 No 31 1.08 Yes 0 0 No -23 0.79 Yes 27 86.37 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68532481 + NM_133509 RAD51B 0 . . . 2.64 0 11 4.12 No 67 -5.17 No 0 0 No -32 0.3 No 45 34.4 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105174944 + NM_021930 RINT1 0 . . . 6.16 83.84 9 4.69 No 52 0.56 No 0 0 No -21 0.61 No 45 63.79 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr16 68822389 + NM_004360 CDH1 0 . . . 8.37 84.26 36 4.92 No 29 1.3 Yes 0 0 No -20 0.3 No 51 67.88 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69023047 + NM_133509 RAD51B 0 . . . 7.31 92.52 20 4.9 No 35 1.43 Yes 0 0 No -19 0.36 No 47 69.17 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23653165 - NM_024675 PALB2 0 . . . 5.18 78.13 23 6.68 Yes 58 -5.31 No 0 0 No -22 0.61 No 49 60.85 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68459758 + NM_133509 RAD51B 0 . . . 5.16 71.49 20 5.66 Yes 15 2.02 Yes 0 0 No -19 0.67 Yes 43 83.34 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 105199469 + NM_021930 RINT1 0 . . . 4.91 64.6 52 7.33 Yes 33 0.2 No 0 0 No -27 0.61 No 49 32.6 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr19 1210131 + NM_000455 STK11 0 . . . 5.08 86.74 29 4.32 No 73 0.85 Yes 0 0 No -58 0.48 No 47 83.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32949259 + NM_000059 BRCA2 0 . . . 3.65 69.58 21 6.93 Yes 3 0.11 No 0 0 No -20 0.82 Yes 44 51.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41221467 - NM_007294 BRCA1 0 . . . 2.91 81.42 25 4.61 No 4 1.44 Yes 0 0 No -24 0.85 Yes 44 74.67 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89687069 + NM_000314 PTEN 0 . . . 1.63 0 33 5.07 No 38 1.18 Yes 0 0 No -28 0.66 No 48 54.11 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 69111037 + NM_133509 RAD51B 0 . . . 0.94 0 30 5.69 Yes 41 -1.98 No 0 0 No -29 0.82 Yes 31 35.37 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr22 29097466 - NM_001005735 CHEK2 0 . . . 2.12 80.42 23 5.1 No 4 0.13 No 0 0 No -23 0.65 No 54 88.44 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 69078473 + NM_133509 RAD51B 0 . . . 1.01 67.26 27 5.29 No 41 0.99 Yes 0 0 No -26 0.86 Yes 41 73.94 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68522533 + NM_133509 RAD51B 0 . . . 4.94 76.71 15 5.52 No 18 1.36 Yes 0 0 No -50 0.38 No 46 66.82 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89697899 + NM_000314 PTEN 0 . . . 0.58 69.16 29 5.72 Yes 19 0.61 No 0 0 No -28 0.96 Yes 39 46.8 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr8 90970899 - NM_002485 NBN 0 . . . 1.57 58.12 27 4.01 No 39 0.73 No 0 0 No -26 0.68 Yes 40 75.09 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69083564 + NM_133509 RAD51B 0 . . . 7.49 84.06 37 7.2 Yes 42 0.25 No 0 0 No -36 0.55 No 47 74.05 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59866575 - NM_032043 BRIP1 0 . . . 2.42 69.39 27 4.69 No 62 1.18 Yes 0 0 No -30 0.8 Yes 49 41.4 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108231441 + NM_000051 ATM 0 . . . 5.25 72.9 20 4.33 No 75 -5.67 No 0 0 No -19 0.68 Yes 45 21.53 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr13 32902689 + NM_000059 BRCA2 0 . . . 8.64 84.44 22 6.36 Yes 70 1.51 Yes 0 0 No -25 0.59 No 43 57.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 75493584 - NM_001040108 MLH3 0 . . . 6.21 82.31 46 6.71 Yes 58 1.01 Yes 0 0 No -38 0.61 No 54 71 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 190704620 + NM_000534 PMS1 0 . . . 3.07 60.68 35 6.32 Yes 65 0.31 No 0 0 No -34 0.87 Yes 38 66.13 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94165043 - NM_005591 MRE11 0 . . . 3.34 84.15 17 6.93 Yes 48 1.16 Yes 0 0 No -33 0.85 Yes 49 38.95 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 47666829 + NM_000251 MSH2 0 . . . 2.47 73.08 15 4.61 No 34 -3.99 No 0 0 No -27 0.67 Yes 48 67.16 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 94180546 - NM_005591 MRE11 0 . . . 6.68 78.49 23 4.34 No 16 0.24 No 0 0 No -22 0.91 Yes 42 87.93 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr3 37080237 + NM_000249 MLH1 0 . . . 4.03 74.18 24 4.99 No 16 1.27 Yes 0 0 No -23 0.69 Yes 42 66.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr19 1224445 + NM_000455 STK11 0 . . . 5.82 82.17 20 5.57 Yes 29 1.2 Yes 0 0 No -19 0.59 No 29 80.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47631264 + NM_000251 MSH2 0 . . . 3.13 71.95 24 7.97 Yes 70 0.76 No 0 0 No -23 0.7 Yes 41 78.21 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68553738 + NM_133509 RAD51B 0 . . . 1.14 74.68 9 8 Yes 64 1.11 Yes 0 0 No -33 0.71 Yes 36 54.97 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr2 215589446 - NM_000465 BARD1 0 . . . 0.74 60.73 27 5.67 Yes 68 0.85 Yes 0 0 No -26 0.8 Yes 56 52.1 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41233400 - NM_007294 BRCA1 0 . . . 5.82 84.19 36 7.68 Yes 41 0.35 No 0 0 No -35 0.79 Yes 30 46.08 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 6049685 - NM_000535 PMS2 0 . . . 3.57 80.07 24 6.93 Yes 3 0.89 Yes 0 0 No -23 0.96 Yes 35 72.55 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 47635889 + NM_000251 MSH2 0 . . . 0.9 77.12 19 3.56 No 4 0.1 No 0 0 No -19 0.62 No 54 78.43 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr13 32900969 + NM_000059 BRCA2 0 . . . 3.58 71.19 16 5.23 No 75 0.96 Yes 0 0 No -48 0.9 Yes 54 66.35 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr10 89621730 + NM_000314 PTEN 0 . . . 8.18 79.05 51 6.01 Yes 9 1.01 Yes 0 0 No -40 0.75 Yes 49 89.76 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 190739050 + NM_000534 PMS1 0 . . . 3.64 65.85 44 6.53 Yes 22 1.47 Yes 0 0 No -23 0.75 Yes 36 90.42 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215605156 - NM_000465 BARD1 0 . . . 3.55 72.85 13 4.97 No 38 0.33 No 0 0 No -20 0.93 Yes 49 60.15 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190725314 + NM_000534 PMS1 0 . . . 5.39 74.55 47 7.81 Yes 51 0.45 No 0 0 No -27 0.46 No 21 61.91 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41274413 - NM_007294 BRCA1 0 . . . 1.01 71.13 20 6.63 Yes 11 -1.65 No 0 0 No -20 0.47 No 47 84.95 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190704514 + NM_000534 PMS1 0 . . . 7.69 89.89 9 4.54 No 61 0.3 No 0 0 No -44 0.66 No 40 56.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131897120 + NM_005732 RAD50 0 . . . 8.32 86.39 16 5.23 No 58 1.03 Yes 0 0 No -39 0.36 No 54 73.3 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr5 131967590 + NM_005732 RAD50 0 . . . 6.76 80.38 17 4.36 No 64 -3.18 No 0 0 No -23 0.49 No 45 67.67 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr22 29121174 - NM_001005735 CHEK2 0 . . . 6.12 78.68 39 6.46 Yes 7 0.56 No 0 0 No -27 0.56 No 51 57.38 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56808486 + NM_058216 RAD51C 0 . . . 2.03 80.57 24 6.54 Yes 70 1.09 Yes 0 0 No -22 0.6 No 45 75.27 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59888177 - NM_032043 BRIP1 0 . . . 1.05 71.18 22 6.13 Yes 41 0.28 No 0 0 No -21 0.82 Yes 50 31.54 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69145174 + NM_133509 RAD51B 0 . . . 4.89 0 34 7.2 Yes 52 1.43 Yes 0 0 No -28 0.74 Yes 35 97.18 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152347826 - NM_005431 XRCC2 0 . . . 0.28 68.4 18 3.55 No 47 0.72 No 0 0 No -18 0.76 Yes 48 71.12 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68410893 + NM_133509 RAD51B 0 . . . 2.14 75.27 15 5.2 No 26 0.56 No 0 0 No -24 0.54 No 49 56.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr5 131894037 + NM_005732 RAD50 0 . . . 6.98 73.8 51 8 Yes 16 0.33 No 0 0 No -50 0.27 No 42 63.12 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 94185907 - NM_005591 MRE11 0 . . . 6.42 70.2 24 7.07 Yes 55 0.01 No 0 0 No -23 0.33 No 31 80.72 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68353189 + NM_133509 RAD51B 0 . . . 7.56 87.58 31 6.41 Yes 25 0.61 No 0 0 No -30 0.72 Yes 46 65.1 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr9 21995300 - NM_000077 CDKN2A 0 . . . 2.18 70.26 10 4.37 No 12 -0.85 No 0 0 No -24 0.54 No 59 36.14 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68951977 + NM_133509 RAD51B 0 . . . 6.03 81.58 64 7.2 Yes 67 1.23 Yes 0 0 No -61 0.34 No 38 48.42 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190691033 + NM_000534 PMS1 0 . . . 6.42 79.09 18 3.64 No 5 0.52 No 0 0 No -26 0.83 Yes 36 74.62 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 215632712 - NM_000465 BARD1 0 . . . 3.92 70.09 20 5.82 Yes 66 0.79 Yes 0 0 No -19 0.85 Yes 42 61.98 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131949779 + NM_005732 RAD50 0 . . . 5.59 71.6 31 5.72 Yes 17 0.15 No 0 0 No -30 0.91 Yes 41 61.65 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 105196777 + NM_021930 RINT1 0 . . . 5.99 71.34 25 5.57 Yes 23 1.63 Yes 0 0 No -24 0.82 Yes 45 77.26 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89716587 + NM_000314 PTEN 0 . . . 0.64 0 48 6.74 Yes -4 1.17 Yes 0 0 No -31 0.73 Yes 27 60.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr13 32887821 + NM_000059 BRCA2 0 . . . 1.07 71.42 18 4.04 No -1 0.82 Yes 0 0 No -22 0.9 Yes 48 75.32 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89677927 + NM_000314 PTEN 0 . . . 3.6 85.02 18 4.78 No 4 1.2 Yes 0 0 No -17 0.31 No 54 65.9 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29119743 - NM_001005735 CHEK2 0 . . . 0.26 70.38 36 6.08 Yes 34 1.19 Yes 0 0 No -36 0.78 Yes 24 80.06 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr10 89629167 + NM_000314 PTEN 0 . . . 0.99 77.63 24 5.1 No 34 -2.1 No 0 0 No -24 0.5 No 48 67.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 7580059 - NM_000546 TP53 0 . . . 10.55 90.05 21 5.07 No 16 0.18 No 0 0 No -20 0.59 No 46 83.72 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 56801011 + NM_058216 RAD51C 0 . . . 1 65.94 29 5.23 No 45 1.64 Yes 0 0 No -21 0.71 Yes 26 80.23 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90947269 - NM_002485 NBN 0 . . . 6.57 72.95 19 5 No 16 0.72 No 0 0 No -18 0.67 Yes 42 43.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68793477 + NM_133509 RAD51B 0 . . . 1.19 0 56 8.36 Yes 38 0.89 Yes 0 0 No -46 0.31 No 39 59.9 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68372732 + NM_133509 RAD51B 0 . . . 3.26 78.85 23 4.05 No 55 0.46 No 0 0 No -22 0.77 Yes 49 90.7 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21990933 - NM_000077 CDKN2A 0 . . . 1.09 71.49 11 5.2 No 49 1.43 Yes 0 0 No -23 0.43 No 41 79.48 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68616409 + NM_133509 RAD51B 0 . . . 4.02 76.04 32 5.7 Yes 5 0.78 Yes 0 0 No -29 0.91 Yes 44 83.21 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68974048 + NM_133509 RAD51B 0 . . . 1.62 80.25 16 5.66 Yes 25 -1.3 No 0 0 No -30 0.4 No 48 51.76 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68366089 + NM_133509 RAD51B 0 . . . 4.06 72.03 37 6.56 Yes 73 0.88 Yes 0 0 No -39 0.46 No 49 51.03 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215649279 - NM_000465 BARD1 0 . . . 4.07 77.92 23 5.67 Yes 75 -1.53 No 0 0 No -22 0.81 Yes 43 45.6 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69116879 + NM_133509 RAD51B 0 . . . 0.32 67.55 21 5.07 No 28 1.48 Yes 0 0 No -20 0.76 Yes 19 27.55 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 75501056 - NM_001040108 MLH3 0 . . . 3.4 66.05 15 4.16 No 67 0.5 No 0 0 No -23 0.65 No 47 60.19 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41000046 + NM_001164269 RAD51 0 . . . 0.09 0 23 4.85 No 32 1.21 Yes 0 0 No -22 0.95 Yes 39 37.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68813730 + NM_133509 RAD51B 0 . . . 3.46 71.15 21 6.09 Yes 15 0.31 No 0 0 No -20 0.94 Yes 43 56.06 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68790342 + NM_004360 CDH1 0 . . . 5.05 91.49 16 4.69 No 5 0.31 No 0 0 No -40 0.64 No 52 69.53 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 56791225 + NM_058216 RAD51C 0 . . . 2.18 74.46 20 4.47 No 57 0.34 No 0 0 No -19 0.79 Yes 56 58.18 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 41220406 - NM_007294 BRCA1 0 . . . 1.18 71.05 28 5.39 No 76 -2.71 No 0 0 No -43 0.54 No 46 68.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68911878 + NM_133509 RAD51B 0 . . . 8.62 90.81 20 4.47 No 3 1.1 Yes 0 0 No -22 0.46 No 36 53.14 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 68789620 + NM_004360 CDH1 0 . . . 2.97 78.1 17 6.4 Yes 76 1.34 Yes 0 0 No -25 0.37 No 44 96.49 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68378905 + NM_133509 RAD51B 0 . . . 2.85 60.39 20 6.13 Yes 74 0.02 No 0 0 No -19 0.56 No 34 57.45 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47741850 + NM_000251 MSH2 0 . . . 5.04 83.67 48 8.59 Yes 58 0.9 Yes 0 0 No -23 0.62 No 43 84.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59886180 - NM_032043 BRIP1 0 . . . 2.15 72.56 28 6.51 Yes 21 0.73 No 0 0 No -27 0.82 Yes 48 93.04 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 69040850 + NM_133509 RAD51B 0 . . . 3.75 0 22 5.67 Yes 49 0.25 No 0 0 No -21 0.3 No 25 63.8 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190657720 + NM_000534 PMS1 0 . . . 2.24 80.12 28 5.15 No 74 0.63 No 0 0 No -23 0.88 Yes 40 65.89 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 33440860 - NM_002878 RAD51D 0 . . . 0.83 0 27 5.68 Yes 69 -4.28 No 0 0 No -24 0.41 No 48 53.26 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr4 84407626 - NM_139076 FAM175A 0 . . . 3.27 61.85 11 3.63 No 22 1.03 Yes 0 0 No -22 0.53 No 36 94.82 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 69038325 + NM_133509 RAD51B 0 . . . 3.43 77.03 34 6.78 Yes 51 1.92 Yes 0 0 No -23 0.67 Yes 46 15.9 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 108223970 + NM_000051 ATM 0 . . . 9.03 89.48 30 5.9 Yes 53 0.76 No 0 0 No -27 0.69 Yes 44 92.79 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68519931 + NM_133509 RAD51B 0 . . . 1.27 0 31 7.12 Yes 49 0.93 Yes 0 0 No -24 0.63 No 55 49.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47649973 + NM_000251 MSH2 0 . . . 4.94 78.97 39 7.36 Yes 37 0.85 Yes 0 0 No -31 0.48 No 44 71.2 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59914032 - NM_032043 BRIP1 0 . . . 6.92 83.29 15 5.29 No 20 1.47 Yes 0 0 No -30 0.59 No 38 90.94 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68841324 + NM_004360 CDH1 0 . . . 0.16 74.23 14 5.37 No 8 1.72 Yes 0 0 No -25 0.3 No 54 74.18 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 68834204 + NM_004360 CDH1 0 . . . 0.42 0 20 5.57 Yes 34 1.36 Yes 0 0 No -19 0.44 No 46 91.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45806987 - NM_001048171 MUTYH 0 . . . 3.2 73.55 48 4.61 No 73 1.66 Yes 0 0 No -17 0.36 No 47 78.4 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr19 1220924 + NM_000455 STK11 0 . . . 0.93 78.71 23 5.2 No 41 0 No 0 0 No -22 0.85 Yes 49 54.01 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 190682571 + NM_000534 PMS1 0 . . . 2.5 71.98 47 6.63 Yes 38 -3.13 No 0 0 No -28 0.57 No 48 22.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47756543 + NM_000251 MSH2 0 . . . 2.49 75.73 42 7.94 Yes 29 0.72 No 0 0 No -41 0.62 No 50 75.51 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr3 37075268 + NM_000249 MLH1 0 . . . 2.33 62.62 30 7.14 Yes 56 -3.67 No 0 0 No -29 0.87 Yes 47 29.96 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 37063743 + NM_000249 MLH1 0 . . . 1.76 73.18 35 6.38 Yes 29 0.69 No 0 0 No -34 0.73 Yes 41 64.66 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68994678 + NM_133509 RAD51B 0 . . . 5.75 74.03 17 5.57 Yes 74 0.55 No 0 0 No -24 0.68 Yes 38 67.95 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68732355 + NM_133509 RAD51B 0 . . . 2.21 74.68 17 4.68 No 55 0.74 No 0 0 No -16 0.43 No 52 63.36 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190728331 + NM_000534 PMS1 0 . . . 1.41 0 29 3.95 No 33 0.75 No 0 0 No -21 0.9 Yes 25 56.64 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr15 40991128 + NM_001164269 RAD51 0 . . . 4.81 65.67 35 7.41 Yes 55 0.03 No 0 0 No -34 0.72 Yes 50 65.19 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr17 59767473 - NM_032043 BRIP1 0 . . . 1.02 74.29 64 8.45 Yes 49 1.22 Yes 0 0 No -21 0.3 No 47 74.73 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32955087 + NM_000059 BRCA2 0 . . . 4.44 90.44 39 5.64 Yes 4 0.53 No 0 0 No -36 0.42 No 46 72.18 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68565203 + NM_133509 RAD51B 0 . . . 3.23 75.03 17 5.76 Yes 59 0.61 No 0 0 No -16 0.55 No 44 39.08 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68737132 + NM_133509 RAD51B 0 . . . 1.74 73.36 33 4.53 No 19 0.88 Yes 0 0 No -25 0.49 No 39 96.53 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68284911 + NM_133509 RAD51B 0 . . . 1.36 74.7 19 5 No 61 1.72 Yes 0 0 No -25 0.49 No 51 74.29 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68308786 + NM_133509 RAD51B 0 . . . 3.34 83.79 14 4.47 No 65 0.85 Yes 0 0 No -35 0.92 Yes 36 89.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68306751 + NM_133509 RAD51B 0 . . . 4.45 80.02 18 3.86 No 34 0.96 Yes 0 0 No -38 0.66 No 43 60.47 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190667512 + NM_000534 PMS1 0 . . . 8.23 84.55 29 5.45 No 3 2.07 Yes 0 0 No -28 0.72 Yes 40 77.95 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 6047284 - NM_000535 PMS2 0 . . . 5.1 72.86 20 5.43 No 20 -3.27 No 0 0 No -24 0.65 No 42 65.02 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47657296 + NM_000251 MSH2 0 . . . 3.37 68.95 33 5.83 Yes 16 0.97 Yes 0 0 No -27 0.49 No 42 91.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68872665 + NM_133509 RAD51B 0 . . . 5.68 83.31 18 4.57 No 5 0.91 Yes 0 0 No -34 0.83 Yes 42 83.55 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr2 215605449 - NM_000465 BARD1 0 . . . 4.96 82.63 30 6.83 Yes 67 0.85 Yes 0 0 No -29 0.56 No 47 62.84 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68399003 + NM_133509 RAD51B 0 . . . 4.98 71.63 36 5.77 Yes 52 -1.79 No 0 0 No -25 0.63 No 29 40.93 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr13 32968310 + NM_000059 BRCA2 0 . . . 3.94 70.96 18 4.4 No 37 1.57 Yes 0 0 No -43 0.62 No 47 62.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr15 40989537 + NM_001164269 RAD51 0 . . . 5.21 70.45 12 5.38 No 61 1.1 Yes 0 0 No -22 0.83 Yes 55 59.23 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr11 94178198 - NM_005591 MRE11 0 . . . 1.33 69.87 17 6.93 Yes 67 1.29 Yes 0 0 No -27 0.47 No 32 93.89 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr1 45796263 - NM_001048171 MUTYH 0 . . . 3.7 72.75 25 5.2 No 50 -3.54 No 22 0.93 Yes -24 0.43 No 35 45.25 No BPP: No, SVM: No, Branch: , LB: No, RNABPS: No chr2 47698911 + NM_000251 MSH2 0 . . . 1.39 71.89 58 9.2 Yes 72 -5.9 No 0 0 No -44 0.65 No 50 35.21 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69055944 + NM_133509 RAD51B 0 . . . 1.11 77.68 46 7.57 Yes 11 0.26 No 0 0 No -31 0.69 Yes 46 39.41 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68636439 + NM_133509 RAD51B 0 . . . 0.92 74.11 22 5.17 No 75 0.24 No 0 0 No -21 0.89 Yes 47 76.21 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr10 89683219 + NM_000314 PTEN 0 . . . 7.55 86.67 18 4.88 No 52 1.62 Yes 0 0 No -26 0.93 Yes 42 78.34 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68494631 + NM_133509 RAD51B 0 . . . 4.14 82.12 29 8.3 Yes 18 0.03 No 0 0 No -28 0.56 No 40 61.97 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69063210 + NM_133509 RAD51B 0 . . . 5.11 82.5 19 4.89 No 48 -2.43 No 0 0 No -21 0.48 No 45 41.78 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47706582 + NM_000251 MSH2 0 . . . 3.22 79.82 24 5.03 No -2 1.16 Yes 0 0 No -30 0.69 Yes 51 75.83 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68714571 + NM_133509 RAD51B 0 . . . 2.1 68.67 15 4.58 No 65 0.66 No 0 0 No -31 0.8 Yes 41 56.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr7 152365236 - NM_005431 XRCC2 0 . . . 0.88 79.09 28 5.28 No 14 0.12 No 0 0 No -27 0.86 Yes 40 43.65 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68760414 + NM_133509 RAD51B 0 . . . 5.51 85.74 18 4.9 No 54 1.02 Yes 0 0 No -18 0.45 No 46 79.56 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108138125 + NM_000051 ATM 0 . . . 3.84 79.73 15 5.11 No 3 -2.04 No 0 0 No -14 0.35 No 31 86.95 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59806924 - NM_032043 BRIP1 0 . . . 0.17 0 16 6.4 Yes 38 1.01 Yes 0 0 No -34 0.53 No 48 50.1 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68737964 + NM_133509 RAD51B 0 . . . 3.16 70.15 27 5.2 No 70 0.62 No 0 0 No -26 0.95 Yes 42 78.6 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131941877 + NM_005732 RAD50 0 . . . 1.1 73.2 19 6.22 Yes 44 -4.76 No 0 0 No -36 0.5 No 36 33.39 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68889626 + NM_133509 RAD51B 0 . . . 2.37 75.82 24 5.3 No 49 2.16 Yes 0 0 No -27 0.88 Yes 15 41.56 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68997285 + NM_133509 RAD51B 0 . . . 1.6 69.39 56 7.45 Yes 10 0.23 No 0 0 No -45 0.53 No 48 43.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215651023 - NM_000465 BARD1 0 . . . 2.25 76.62 34 7.13 Yes 13 0.52 No 0 0 No -30 0.57 No 38 70.41 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68414901 + NM_133509 RAD51B 0 . . . 7.25 84.24 16 4.07 No 6 0.56 No 0 0 No -45 0.65 No 46 96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr2 190741380 + NM_000534 PMS1 0 . . . 1.15 70.91 27 5.67 Yes 58 0.81 Yes 0 0 No -26 0.95 Yes 21 62.96 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68713298 + NM_133509 RAD51B 0 . . . 5.89 82.13 16 4.12 No 17 0.44 No 0 0 No -30 0.36 No 50 78.02 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68446913 + NM_133509 RAD51B 0 . . . 0.66 71.24 27 5.43 No 4 0.06 No 0 0 No -26 0.81 Yes 54 86.98 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59776432 - NM_032043 BRIP1 0 . . . 3.01 74.34 21 5.33 No 64 -5 No 0 0 No -20 0.67 Yes 44 28.69 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108150998 + NM_000051 ATM 0 . . . 2.17 72.18 11 3.84 No 73 -7 No 0 0 No -24 0.87 Yes 37 83.11 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr5 131978239 + NM_005732 RAD50 0 . . . 3.16 62.86 22 4.69 No 23 0.26 No 0 0 No -21 0.64 No 40 58.5 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68871628 + NM_133509 RAD51B 0 . . . 5.85 81.44 18 4.9 No 14 0.88 Yes 0 0 No -25 0.28 No 41 85.84 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr16 23647004 - NM_024675 PALB2 0 . . . 1.3 68.29 20 4.86 No 37 0.75 No 0 0 No -20 0.65 No 47 57.84 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215623439 - NM_000465 BARD1 0 . . . 1.18 69.76 26 5.2 No 74 -6.61 No 0 0 No -23 0.58 No 52 39.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68350461 + NM_133509 RAD51B 0 . . . 6.82 79.14 42 7.03 Yes 63 1.39 Yes 0 0 No -41 0.75 Yes 38 49.77 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59835019 - NM_032043 BRIP1 0 . . . 2.14 60.35 56 7.3 Yes 65 0.46 No 0 0 No -32 0.6 No 53 49.36 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41221621 - NM_007294 BRCA1 0 . . . 2.65 72.76 35 6.4 Yes 22 0.62 No 0 0 No -34 0.7 Yes 18 63.17 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68601538 + NM_133509 RAD51B 0 . . . 7.06 81.59 15 4.36 No 52 1.28 Yes 0 0 No -45 0.66 No 36 73.41 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr8 90959665 - NM_002485 NBN 0 . . . 2.32 83.37 23 5.95 Yes 32 0.63 No 0 0 No -20 0.71 Yes 40 79.37 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68780230 + NM_133509 RAD51B 0 . . . 2.6 77.44 17 4.8 No 12 0.26 No 0 0 No -38 0.62 No 46 76.38 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr8 90998851 - NM_002485 NBN 0 . . . 4.79 80.43 15 5 No 31 0.13 No 0 0 No -25 0.29 No 44 78.96 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59895369 - NM_032043 BRIP1 0 . . . 0.3 0 32 5.57 Yes 16 1.35 Yes 0 0 No -31 0.91 Yes 42 76.48 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr13 32923110 + NM_000059 BRCA2 0 . . . 1.47 73.14 20 7.13 Yes 60 -4.27 No 0 0 No -19 0.58 No 55 66.48 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6011498 - NM_000535 PMS2 0 . . . 3.6 85.02 53 7.38 Yes 4 1.2 Yes 0 0 No -34 0.82 Yes 46 62.82 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59920410 - NM_032043 BRIP1 0 . . . 3.38 65.16 28 6.01 Yes 46 1.4 Yes 0 0 No -27 0.51 No 12 66.71 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr16 23614104 - NM_024675 PALB2 0 . . . 6.56 88.68 16 5.35 No 74 0.91 Yes 0 0 No -30 0.76 Yes 49 95.63 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr8 90945227 - NM_002485 NBN 0 . . . 4.75 74.69 29 6.32 Yes 72 -3.05 No 0 0 No -28 0.81 Yes 40 42.75 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215652233 - NM_000465 BARD1 0 . . . 6.25 82.21 29 5.49 No 6 0.71 No 0 0 No -28 0.88 Yes 41 55.25 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68698521 + NM_133509 RAD51B 0 . . . 0.81 67.92 18 6.92 Yes 27 2.23 Yes 0 0 No -41 0.7 Yes 48 47.03 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68920268 + NM_133509 RAD51B 0 . . . 1.09 0 39 6.55 Yes 36 1.21 Yes 0 0 No -23 0.63 No 49 50.2 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68592741 + NM_133509 RAD51B 0 . . . 2.34 63.4 16 4.91 No 36 0.51 No 0 0 No -27 0.76 Yes 44 55.86 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr11 108212728 + NM_000051 ATM 0 . . . 4.12 77.19 11 4.8 No 67 0.7 No 0 0 No -20 0.58 No 48 60.18 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr15 41009241 + NM_001164269 RAD51 0 . . . 0.25 61.34 24 4.9 No 36 -2.09 No 0 0 No -24 0.49 No 47 49.44 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 69083372 + NM_133509 RAD51B 0 . . . 0.66 68.99 24 5 No 75 0.66 No 0 0 No -23 0.89 Yes 39 76.47 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr16 68830174 + NM_004360 CDH1 0 . . . 8.54 91.72 24 5.47 No 8 0.91 Yes 0 0 No -28 0.48 No 49 41.93 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68307205 + NM_133509 RAD51B 0 . . . 1.65 63.93 31 5.81 Yes 17 0.14 No 0 0 No -25 0.47 No 38 55.82 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 190648026 + NM_000534 PMS1 0 . . . 8.97 78.93 25 6.08 Yes 69 0.79 Yes 0 0 No -25 0.74 Yes 38 69.97 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr7 152373157 - NM_005431 XRCC2 0 . . . 0.46 54.41 20 4.8 No 25 0.32 No 0 0 No -19 0.61 No 26 52.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41210034 - NM_007294 BRCA1 0 . . . 2.3 84.41 20 5.43 No 28 1.12 Yes 0 0 No -29 0.5 No 38 79.31 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68376746 + NM_133509 RAD51B 0 . . . 5.35 76.9 25 4.15 No 28 0.96 Yes 0 0 No -24 0.79 Yes 27 66.59 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59811141 - NM_032043 BRIP1 0 . . . 1.73 0 43 8.03 Yes 46 0.96 Yes 0 0 No -23 0.47 No 12 62.18 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr7 105188384 + NM_021930 RINT1 0 . . . 2.53 80.34 16 5.04 No 32 0.99 Yes 0 0 No -28 0.65 No 42 53.37 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr10 89703012 + NM_000314 PTEN 0 . . . 0.81 70.36 45 6.85 Yes 54 1.41 Yes 0 0 No -34 0.54 No 46 67.54 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68312446 + NM_133509 RAD51B 0 . . . 4.13 82 25 4.92 No 10 0.15 No 0 0 No -55 0.29 No 45 93.07 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68994732 + NM_133509 RAD51B 0 . . . 4.26 80.82 26 4.11 No 40 0.64 No 0 0 No -25 0.39 No 39 58.27 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68659189 + NM_133509 RAD51B 0 . . . 8.48 90.68 25 3.85 No 3 0.67 No 0 0 No -24 0.89 Yes 47 40.82 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68989713 + NM_133509 RAD51B 0 . . . 1.24 0 22 4.79 No 38 -3.9 No 0 0 No -49 0.55 No 49 66.17 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 41269589 - NM_007294 BRCA1 0 . . . 0.7 74.96 21 4.9 No 74 0.03 No 0 0 No -20 0.9 Yes 50 72.32 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr17 59824820 - NM_032043 BRIP1 0 . . . 1.11 65.22 17 6.08 Yes 56 0.17 No 0 0 No -16 0.76 Yes 38 48.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68511390 + NM_133509 RAD51B 0 . . . 5.41 78.52 26 4.35 No 74 0.77 No 0 0 No -33 0.8 Yes 35 48.38 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68782259 + NM_133509 RAD51B 0 . . . 2.23 83 36 5.98 Yes 25 0.45 No 0 0 No -35 0.57 No 40 67.33 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47779598 + NM_000251 MSH2 0 . . . 5.24 73.15 27 5.03 No 74 1.28 Yes 0 0 No -29 0.72 Yes 45 42.2 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr5 131965865 + NM_005732 RAD50 0 . . . 2.32 63.49 33 6.99 Yes 45 1.4 Yes 0 0 No -32 0.42 No 39 38.95 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 47717994 + NM_000251 MSH2 0 . . . 3.32 78.03 57 7.32 Yes 26 -1.44 No 0 0 No -34 0.71 Yes 42 63.04 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr5 131928068 + NM_005732 RAD50 0 . . . 4.22 72.14 25 5.57 Yes 45 0.14 No 0 0 No -24 0.69 Yes 44 62.23 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr16 68818900 + NM_004360 CDH1 0 . . . 6.66 71.27 16 5.48 No 41 1.54 Yes 0 0 No -15 0.6 No 39 56.55 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr14 68540793 + NM_133509 RAD51B 0 . . . 5.5 71.06 18 4.36 No 34 0.95 Yes 0 0 No -22 0.6 No 38 47.45 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr22 29084946 - NM_001005735 CHEK2 0 . . . 2.86 76.86 18 4.44 No 66 0.75 No 0 0 No -21 0.6 No 45 35.1 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47638369 + NM_000251 MSH2 0 . . . 5.06 87.2 21 6.33 Yes 36 0.97 Yes 0 0 No -26 0.67 Yes 47 54.88 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68669912 + NM_133509 RAD51B 0 . . . 2.14 75.62 25 5.06 No 59 0.52 No 0 0 No -22 0.42 No 44 79.63 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41222647 - NM_007294 BRCA1 0 . . . 3.93 70.62 43 6.45 Yes 68 -3.9 No 0 0 No -23 0.61 No 40 56.63 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47730070 + NM_000251 MSH2 0 . . . 4.84 67.08 22 5.12 No 5 0.52 No 0 0 No -31 0.77 Yes 52 46.55 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 47757030 + NM_000251 MSH2 0 . . . 5.53 67.49 21 6.22 Yes 36 0.13 No 0 0 No -21 0.57 No 41 54.22 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47779348 + NM_000251 MSH2 0 . . . 1.37 69.65 30 6.63 Yes 72 -6.12 No 0 0 No -29 0.58 No 60 36.24 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68929583 + NM_133509 RAD51B 0 . . . 0.98 68.25 33 5.87 Yes 19 -2.53 No 0 0 No -32 0.74 Yes 40 83.19 Yes BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr14 68819777 + NM_133509 RAD51B 0 . . . 1.34 79.57 18 4.68 No 51 0.71 No 0 0 No -17 0.63 No 53 72.6 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr4 84383397 - NM_139076 FAM175A 0 . . . 3.38 69.09 32 5.74 Yes 1 0.95 Yes 0 0 No -28 0.42 No 38 76.11 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59858983 - NM_032043 BRIP1 0 . . . 7.64 81.46 27 5.54 No 76 1.69 Yes 0 0 No -24 0.66 No 34 42.42 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 48019309 + NM_000179 MSH6 0 . . . 3.6 85.02 23 7.5 Yes 74 1.27 Yes 0 0 No -25 0.87 Yes 54 74.45 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr17 56780412 + NM_058216 RAD51C 0 . . . 1.72 70.62 32 7.75 Yes 0 0.24 No 0 0 No -31 0.66 No 41 51.71 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47733971 + NM_000251 MSH2 0 . . . 2.56 82.04 16 5.07 No 68 -0.98 No 0 0 No -30 0.28 No 49 31.66 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215671431 - NM_000465 BARD1 0 . . . 5.15 80.12 18 4.47 No 7 1.21 Yes 0 0 No -21 0.66 No 51 88.7 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr17 59808639 - NM_032043 BRIP1 0 . . . 0.53 63.25 63 6.39 Yes 68 -4.09 No 0 0 No -35 0.67 Yes 19 25.33 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68978865 + NM_133509 RAD51B 0 . . . 2.71 74.32 38 6.08 Yes 71 1.28 Yes 0 0 No -30 0.79 Yes 49 56.4 No BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr14 68441384 + NM_133509 RAD51B 0 . . . 3.76 76.34 26 4 No 0 0.32 No 0 0 No -25 0.5 No 44 39.06 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59779523 - NM_032043 BRIP1 0 . . . 0.63 65.19 33 6.05 Yes 42 -4.09 No 0 0 No -32 0.68 Yes 51 19.91 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69130608 + NM_133509 RAD51B 0 . . . 5.92 84.01 29 6.17 Yes 50 1.45 Yes 0 0 No -26 0.51 No 54 87.81 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47806867 + NM_000251 MSH2 0 . . . 2.29 65.17 21 5.74 Yes 12 1.3 Yes 0 0 No -26 0.53 No 42 65.15 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 59839653 - NM_032043 BRIP1 0 . . . 5.06 82.89 21 5.56 Yes 32 0.74 No 0 0 No -31 0.55 No 40 63.52 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68393443 + NM_133509 RAD51B 0 . . . 0.76 68.06 47 6.91 Yes 52 0.02 No 0 0 No -23 0.53 No 48 49.41 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68460475 + NM_133509 RAD51B 0 . . . 2.22 0 24 5.19 No 63 1.66 Yes 0 0 No -23 0.71 Yes 47 65.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr7 105196957 + NM_021930 RINT1 0 . . . 5.43 83.77 15 5.45 No 31 0.86 Yes 0 0 No -26 0.62 No 47 69.99 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr11 108150756 + NM_000051 ATM 0 . . . 7.63 78.99 31 5.48 No 7 0.71 No 0 0 No -18 0.73 Yes 36 83.72 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr9 21981665 - NM_000077 CDKN2A 0 . . . 7.16 77.9 30 4 No 34 0.86 Yes 0 0 No -29 0.58 No 43 71.5 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68801468 + NM_133509 RAD51B 0 . . . 3.89 67.44 19 5.65 Yes 63 0.56 No 0 0 No -21 0.46 No 49 72.82 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68869482 + NM_004360 CDH1 0 . . . 3.34 75.65 31 6.92 Yes 45 0.31 No 0 0 No -30 0.87 Yes 36 48.25 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr2 215610729 - NM_000465 BARD1 0 . . . 3.45 76.07 18 4.9 No 33 0.93 Yes 0 0 No -17 0.64 No 46 33.79 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 190732346 + NM_000534 PMS1 0 . . . 3.25 70.24 17 5.29 No 36 0.3 No 0 0 No -21 0.57 No 41 63.59 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68872389 + NM_133509 RAD51B 0 . . . 5.62 85.95 30 5.09 No 68 1.24 Yes 0 0 No -29 0.45 No 47 90.14 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68831281 + NM_133509 RAD51B 0 . . . 10.52 92.15 13 4.75 No 73 -2.19 No 0 0 No -21 0.63 No 41 78.3 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 41201617 - NM_007294 BRCA1 0 . . . 1.66 80.48 22 5.2 No 54 0.74 No 0 0 No -21 0.57 No 50 59.94 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68932028 + NM_133509 RAD51B 0 . . . 6.51 85.98 13 3.64 No 42 1.08 Yes 0 0 No -21 0.45 No 35 79.54 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr15 41024934 + NM_001164269 RAD51 0 . . . 5.11 84.79 17 5.83 Yes 2 1.59 Yes 0 0 No -16 0.42 No 44 72.47 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr13 32934732 + NM_000059 BRCA2 0 . . . 5.69 82.31 25 6.37 Yes 58 1.13 Yes 0 0 No -28 0.47 No 54 72.22 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr7 105194095 + NM_021930 RINT1 0 . . . 5.92 82.31 25 5.38 No 63 -4.04 No 0 0 No -25 0.43 No 55 30.45 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr17 33443779 - NM_002878 RAD51D 0 . . . 1.16 74.78 12 4.09 No 4 0.4 No 0 0 No -28 0.41 No 54 82.57 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr17 59819596 - NM_032043 BRIP1 0 . . . 0.03 68.08 19 5 No 17 1.37 Yes 0 0 No -23 0.67 Yes 51 40.36 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 56768627 + NM_058216 RAD51C 0 . . . 0.2 63.29 29 4.38 No 56 1.57 Yes 0 0 No -34 0.64 No 17 44.23 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr5 131893293 + NM_005732 RAD50 0 . . . 4.33 80.73 22 5.74 Yes 68 -5.52 No 0 0 No -28 0.62 No 44 57.37 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr17 59824124 - NM_032043 BRIP1 0 . . . 5.96 78.14 45 9.3 Yes 22 1.05 Yes 0 0 No -34 0.52 No 36 84.09 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47691093 + NM_000251 MSH2 0 . . . 3.13 69.75 30 6.4 Yes -2 0.76 No 0 0 No -29 0.35 No 43 46.07 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68670652 + NM_133509 RAD51B 0 . . . 1.73 69.35 28 4.9 No 69 2.04 Yes 0 0 No -23 0.77 Yes 51 60.52 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 41195745 - NM_007294 BRCA1 0 . . . 0.72 0 20 5.68 Yes 24 0.7 No 0 0 No -29 0.62 No 47 52.89 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr2 215668194 - NM_000465 BARD1 0 . . . 7.46 80.83 47 5.97 Yes 58 -3.86 No 0 0 No -35 0.77 Yes 33 46.57 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr1 45794339 - NM_001048171 MUTYH 0 . . . 3.97 72.96 15 4.57 No 76 0.51 No 0 0 No -26 0.78 Yes 48 52.04 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr10 89707618 + NM_000314 PTEN 0 . . . 2.1 76.63 17 5.82 Yes 58 0.24 No 0 0 No -16 0.4 No 43 44.06 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr3 52444304 - NM_004656 BAP1 0 . . . 1.91 70.91 28 4.75 No NA NA NA 0 0 No -30 0.48 No 40 47.87 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr14 68865789 + NM_133509 RAD51B 0 . . . 0.13 63.15 69 8.06 Yes 37 -4.07 No 0 0 No -22 0.31 No 43 70.37 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr5 131943057 + NM_005732 RAD50 0 . . . 2.38 78.75 17 4.8 No 47 0.65 No 0 0 No -20 0.37 No 51 47.23 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr2 47747329 + NM_000251 MSH2 0 . . . 10.94 87.88 43 6.4 Yes 7 1.92 Yes 0 0 No -27 0.55 No 51 70.78 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68400011 + NM_133509 RAD51B 0 . . . 3.68 73.98 20 4.84 No 67 0.22 No 0 0 No -19 0.69 Yes 48 74.06 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr11 108185096 + NM_000051 ATM 0 . . . 1.66 68.07 28 5.38 No 76 0.9 Yes 0 0 No -27 0.47 No 40 83.21 Yes BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr2 47676211 + NM_000251 MSH2 0 . . . 2.77 70.22 28 5.29 No 61 0.82 Yes 0 0 No -27 0.75 Yes 29 5.72 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr16 68850907 + NM_004360 CDH1 0 . . . 2.75 75.36 20 5.09 No 70 -5.08 No 0 0 No -55 0.57 No 51 78.04 Yes BPP: No, SVM: No, Branch: No, LB: No, RNABPS: Yes chr16 68784074 + NM_004360 CDH1 0 . . . 5.77 82.07 20 5.66 Yes 24 0.94 Yes 0 0 No -19 0.85 Yes 46 92.46 Yes BPP: Yes, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68811094 + NM_133509 RAD51B 0 . . . 0.18 0 19 3.65 No 29 -3.31 No 0 0 No -22 0.89 Yes 42 21.93 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 69054690 + NM_133509 RAD51B 0 . . . 3.81 74.45 31 5.74 Yes 45 -2.07 No 0 0 No -30 0.91 Yes 47 45.69 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68766045 + NM_133509 RAD51B 0 . . . 5.42 78.51 74 7.19 Yes 49 0.78 Yes 0 0 No -21 0.15 No 47 88.94 Yes BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: Yes chr14 68726473 + NM_133509 RAD51B 0 . . . 4.16 0 20 4.89 No 24 1.25 Yes 0 0 No -19 0.72 Yes 34 96.7 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68338009 + NM_133509 RAD51B 0 . . . 1.63 68.82 25 5.57 Yes 58 -5 No 0 0 No -24 0.9 Yes 47 45.85 No BPP: Yes, SVM: No, Branch: No, LB: Yes, RNABPS: No chr3 52435038 - NM_004656 BAP1 0 . . . 0.98 63.65 21 5.24 No 42 1.48 Yes 0 0 No -20 0.31 No 46 37.51 No BPP: No, SVM: Yes, Branch: No, LB: No, RNABPS: No chr2 215622181 - NM_000465 BARD1 0 . . . 5.8 71.08 23 6.78 Yes 63 0.55 No 0 0 No -23 0.44 No 44 61.34 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr11 108137385 + NM_000051 ATM 0 . . . 1.13 68.89 24 4.49 No -2 0.51 No 0 0 No -23 0.85 Yes 45 77.97 Yes BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: Yes chr2 47768704 + NM_000251 MSH2 0 . . . 6.52 76 15 4.58 No 38 1.4 Yes 0 0 No -36 0.94 Yes 42 69.98 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes chr14 68521619 + NM_133509 RAD51B 0 . . . 1.18 0 29 5.17 No 5 0.38 No 0 0 No -23 0.65 No 38 62.91 No BPP: No, SVM: No, Branch: No, LB: No, RNABPS: No chr7 105175666 + NM_021930 RINT1 0 . . . 1.23 63.01 14 4.71 No 52 1.23 Yes 0 0 No -25 0.75 Yes 29 53.31 No BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: No chr17 59850614 - NM_032043 BRIP1 0 . . . 6.95 97.24 51 8.42 Yes 60 0.06 No 0 0 No -28 0.56 No 52 83.62 Yes BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: Yes chr14 68890381 + NM_133509 RAD51B 0 . . . 0.31 68.21 18 6.76 Yes 24 1.38 Yes 0 0 No -32 0.59 No 47 60.12 No BPP: Yes, SVM: Yes, Branch: No, LB: No, RNABPS: No chr17 41222556 - NM_007294 BRCA1 0 . . . 1.93 74.44 42 6.63 Yes 17 -1.74 No 0 0 No -41 0.53 No 46 66.3 No BPP: Yes, SVM: No, Branch: No, LB: No, RNABPS: No chr7 6047324 - NM_000535 PMS2 0 . . . 4.14 94.16 20 5.09 No 76 -4.39 No 0 0 No -23 0.73 Yes 50 62.75 No BPP: No, SVM: No, Branch: No, LB: Yes, RNABPS: No chr14 68502884 + NM_133509 RAD51B 0 . . . 3.71 79.35 21 3.53 No 59 1.25 Yes 0 0 No -20 0.75 Yes 50 79.03 Yes BPP: No, SVM: Yes, Branch: No, LB: Yes, RNABPS: Yes